BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase
(methyltransferase) protein [Candidatus Liberibacter asiaticus str.
psy62]
         (264 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040552|gb|ACT57348.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 264

 Score =  532 bits (1370), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF
Sbjct: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP
Sbjct: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV
Sbjct: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE
Sbjct: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           SRKLFLVNAFKDYGGNDRVLLFCR
Sbjct: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264


>gi|315122703|ref|YP_004063192.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496105|gb|ADR52704.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 293

 Score =  397 bits (1020), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 189/264 (71%), Positives = 222/264 (84%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +Q LR+  SFLC VTGLSS QVI  PD++LDD QR  L  A++RSL +ESIHRI GWRDF
Sbjct: 30  LQGLRNPRSFLCGVTGLSSCQVIACPDTILDDEQRLLLKKAVIRSLNYESIHRICGWRDF 89

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           YNVRL LSSDTFEPRPETELLVDS L+F L +  K+   RILDLG G+GA+CLALLKE+ 
Sbjct: 90  YNVRLALSSDTFEPRPETELLVDSILSFFLSQRGKKKDARILDLGMGSGAICLALLKENS 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           FF+G+GVDIS KALEIA+ NAV NG+S+RF  LQS+WFSS+EG FD+IVSNPPYIES +V
Sbjct: 150 FFEGLGVDISSKALEIARKNAVANGLSKRFSALQSNWFSSIEGFFDIIVSNPPYIESAVV 209

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D LG EV++FDP I+LDGG DGLSHYR IADGVSRHL+K+G C +EIGYNQK+DV+RIFE
Sbjct: 210 DKLGPEVKNFDPVIALDGGPDGLSHYRVIADGVSRHLSKNGFCGLEIGYNQKIDVIRIFE 269

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
            +KLFLVN+FKDY  NDR+LLFCR
Sbjct: 270 DKKLFLVNSFKDYEKNDRILLFCR 293


>gi|332716893|ref|YP_004444359.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3]
 gi|325063578|gb|ADY67268.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3]
          Length = 289

 Score =  249 bits (637), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 167/261 (63%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D+   +  VTG S    ++ PD  +   +   +   + R    E +HRILG R+F+ +
Sbjct: 29  LLDARLLVADVTGFSLTDFVMKPDHPVTREESARIAAMVERRAGGEPVHRILGHREFHGL 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L LS++T EPRP+TE+LVD+ L      +  +   RILDLGTGTGA+CLALLKE P   
Sbjct: 89  DLLLSTETLEPRPDTEVLVDTLLPALKKIVADKGSARILDLGTGTGAICLALLKECPEAT 148

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVG DIS  ALE A  NA  NG++ RF+T++SDWF  + G FD+IVSNPPYI S IV  L
Sbjct: 149 GVGSDISADALETAAKNAARNGLASRFETMRSDWFKKISGRFDIIVSNPPYIRSDIVTTL 208

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  DP  +LDGG DGL+ YR IA    R L ++G+  VEIG++Q++DV  IF S  
Sbjct: 209 DREVRHHDPMAALDGGQDGLAPYRLIAADAGRFLVENGIVGVEIGFDQRLDVSAIFASHG 268

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
             L++A KDYGGNDRVL F R
Sbjct: 269 FSLLDAVKDYGGNDRVLTFRR 289


>gi|222087302|ref|YP_002545839.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
 gi|221724750|gb|ACM27906.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
          Length = 291

 Score =  244 bits (623), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 113/217 (52%), Positives = 150/217 (69%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L HE +HRILG R+FY + + LS  T EPRP+TE+LVD+ L  +         + +LD+G
Sbjct: 71  LNHEPVHRILGEREFYGLPMALSPATLEPRPDTEILVDTVLPHARRLATDHGTIHLLDMG 130

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TGTGA+CLALL E     G+G DIS +ALE A++NA  NG++ RFDT+Q  WF ++ G F
Sbjct: 131 TGTGAICLALLHECQQAMGIGSDISGEALETARANAARNGLAARFDTVQGSWFEAIHGRF 190

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            VIVSNPPYIES ++  L  EV++FDP  +LDGG+DGL  YR IA   +R L++DG+  V
Sbjct: 191 HVIVSNPPYIESSVISTLAPEVKNFDPPAALDGGLDGLDAYRAIAKDAARFLHQDGIVGV 250

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           EIGY+Q+  V  +FE    FL+ A +DYG NDRVL+F
Sbjct: 251 EIGYDQRKTVTSVFEGAGFFLIEAARDYGHNDRVLVF 287


>gi|15890802|ref|NP_356474.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58]
 gi|15159087|gb|AAK89259.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58]
          Length = 289

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/261 (47%), Positives = 166/261 (63%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D+   +  VTG S    ++ P+  +   +   +   I R  + E +HRILG R+F+ +
Sbjct: 29  LVDARLLIADVTGFSLTDFVMKPEHPVTQDESARIAAMIERRAEGEPVHRILGHREFHGL 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L LS +T EPRP+TE+LVD+ L      + ++   RILDLGTGTGA+CLALLKE     
Sbjct: 89  DLLLSKETLEPRPDTEVLVDTLLPALKEAVSRKGSARILDLGTGTGAICLALLKECAQAS 148

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+G DIS  ALE A  NA  NG+  RF+T++S+WF  + G FD+IVSNPPYI + IV  L
Sbjct: 149 GIGSDISADALETAAKNAARNGLDSRFETIRSNWFEKISGRFDIIVSNPPYIRTDIVATL 208

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ DP  +LDGG DGL+ YR IA    R L ++G   VEIG++Q++DV  IF S  
Sbjct: 209 DPEVRNHDPMAALDGGQDGLAPYRLIAADAGRFLVENGTVGVEIGFDQRLDVSAIFASHG 268

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
             L++A KDYGGNDRVL F R
Sbjct: 269 FSLLDAVKDYGGNDRVLTFRR 289


>gi|209551099|ref|YP_002283016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536855|gb|ACI56790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 286

 Score =  241 bits (616), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 122/258 (47%), Positives = 164/258 (63%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  LS  +++      L   Q   L+ A+ R L HE +HRILG R+FY + L
Sbjct: 27  DARLLVAGLLKLSPTELLTRSAERLSPEQAEVLSKAVERRLGHEPVHRILGEREFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS++T EPRP+TE+LVD+ LA      +++  + ILD+GTGTGA+CLALL E P   GV
Sbjct: 87  ALSAETLEPRPDTEILVDTVLACLKDLAKEQSHLHILDVGTGTGAICLALLSECPDASGV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DIS  AL  A+SNA  NG+ +RF  +QS WF S++G F  IVSNPPYI S ++  L  
Sbjct: 147 GSDISADALRTARSNAERNGLQDRFQAVQSRWFESIQGSFHAIVSNPPYIASNVIHDLAP 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV  FDP  +LDGG DGL  YR IA   +R +  DG+  +EIGY+Q+ DV  IFE++   
Sbjct: 207 EVTKFDPVAALDGGPDGLDAYRAIAKDAARFMRPDGVVGLEIGYDQRNDVTAIFEAKGFK 266

Query: 246 LVNAFKDYGGNDRVLLFC 263
            + + KDYG NDRVL+F 
Sbjct: 267 CLKSVKDYGQNDRVLVFA 284


>gi|116254018|ref|YP_769856.1| protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258666|emb|CAK09770.1| putative protein methyltransferase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 286

 Score =  237 bits (605), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 120/260 (46%), Positives = 167/260 (64%), Gaps = 4/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  LS  ++++     L   Q   +  A+ R L HE +HRILG R+FY + L
Sbjct: 27  DARLLVAGLLKLSPTELLMRSAERLSPEQAKVIFKALERRLGHEPVHRILGEREFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            LS++T EPRP+TE+LVD+ L +   L +++ R  + ILD+GTGTGA+CLALL E P   
Sbjct: 87  RLSAETLEPRPDTEILVDTVLVYLKDLAKVQNR--LHILDMGTGTGAICLALLSECPDAS 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVG DIS  AL  A+SNA  NG+ +RF+ +QS+WF  ++G F  IVSNPPYI S ++  L
Sbjct: 145 GVGSDISADALLTARSNAERNGLQDRFEAVQSNWFEDIQGSFHAIVSNPPYIASNVIHDL 204

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV  FDP  +LDGG DGL  Y+ IA   +R +  DG+  +EIGY+Q+ DV  IFE++ 
Sbjct: 205 APEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFEAKG 264

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              + + KDYG NDRVL+F 
Sbjct: 265 FRCLKSVKDYGQNDRVLVFA 284


>gi|260467161|ref|ZP_05813339.1| modification methylase, HemK family [Mesorhizobium opportunistum
           WSM2075]
 gi|259029085|gb|EEW30383.1| modification methylase, HemK family [Mesorhizobium opportunistum
           WSM2075]
          Length = 292

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/259 (47%), Positives = 158/259 (61%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   +G +  Q I DP+  +  R    +  A+ R    E +HRILG+R+FY +RL
Sbjct: 31  DARLIVEHFSGTTRTQAIADPEFKVHGRAIETIDAALRRRAGGEPVHRILGYREFYGLRL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P     
Sbjct: 91  SLSPETLEPRPDTETLVEAILPFVKAIAAREGACRILDLGTGTGAIALALLSAEPAATAT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDI+  AL  A  NA   G+  RF  LQSDWF  V G + VI +NPPYI S  +  L  
Sbjct: 151 GVDIAPGALATATGNAGQLGLGGRFTALQSDWFEKVSGRYHVIAANPPYIPSQDIGNLQD 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRDFDPR++LDGG+DGL+ YR IA   +R L  +G  +VEIG  Q+ +V  IF S    
Sbjct: 211 EVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAEGRVAVEIGRTQQDEVTDIFRSAGYG 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           LV AF+D GGNDRVL+F R
Sbjct: 271 LVGAFRDLGGNDRVLVFQR 289


>gi|86359339|ref|YP_471231.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CFN 42]
 gi|86283441|gb|ABC92504.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CFN 42]
          Length = 286

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/258 (45%), Positives = 160/258 (62%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  LSS +++      L   Q   +  A+ R L HE +HRILG R+FY + L
Sbjct: 27  DARLLVAGLLKLSSTELLTRSAEKLSPEQIEVIFKAVERRLGHEPVHRILGEREFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LSS T EPRP+TE+LVD+ L +     + +  + ILD+GTG+GA+CLALL E P   G+
Sbjct: 87  GLSSGTLEPRPDTEILVDTVLPYLKDLAKAQRHLHILDIGTGSGAICLALLSECPAASGI 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DIS  AL  AKSNA  NG+ +RF  +QS WF +++G F  IVSNPPYI S ++  L  
Sbjct: 147 GSDISADALRTAKSNAERNGLQDRFQAVQSKWFENIQGSFHAIVSNPPYIASNVIHDLAP 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV  FDP  +LDGG DGL  Y+ IA    R +  DG+  +EIGY+Q+ DV  IFE++   
Sbjct: 207 EVTKFDPVAALDGGPDGLDAYKAIAKDAVRFMRPDGILGLEIGYDQRNDVTAIFEAKGFR 266

Query: 246 LVNAFKDYGGNDRVLLFC 263
            + + KDYG NDR L+F 
Sbjct: 267 CLKSVKDYGQNDRALVFA 284


>gi|241206501|ref|YP_002977597.1| modification methylase, HemK family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860391|gb|ACS58058.1| modification methylase, HemK family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 286

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/260 (45%), Positives = 165/260 (63%), Gaps = 4/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  LS  +++      L   Q   +  A+ R L HE +HRILG R+FY + L
Sbjct: 27  DARLLVAGLLKLSPTELLTRSAERLSAEQAEAIFRALERRLGHEPVHRILGEREFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            LS++T EPRP+TE+LVD+ L +   L +++ R  + ILD+GTGTGA+CLALL + P   
Sbjct: 87  RLSAETLEPRPDTEILVDTVLVYLKDLAKVQSR--LHILDMGTGTGAICLALLSDCPDAS 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVG DIS  AL  A+SNA  NG+ +RF  +QS WF +++G F  IVSNPPYI S ++  L
Sbjct: 145 GVGSDISADALLTARSNAERNGLQDRFQVVQSSWFENIQGSFHAIVSNPPYIASNVIHDL 204

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV  FDP  +LDGG DGL  Y+ IA   +R +  DG+  +EIGY+Q+ DV  IFE++ 
Sbjct: 205 APEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFEAKG 264

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              + + KDYG NDRVL+F 
Sbjct: 265 FRCLKSVKDYGQNDRVLVFA 284


>gi|327193409|gb|EGE60309.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CNPAF512]
          Length = 279

 Score =  233 bits (593), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/253 (46%), Positives = 159/253 (62%), Gaps = 3/253 (1%)

Query: 14  VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           V GL   SS +++      L   Q   ++ A+ R L HE +HRILG R+FY + L LS++
Sbjct: 25  VAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 84

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P   G+G DIS
Sbjct: 85  TLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPEASGIGSDIS 144

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL  A+SNA  +G+ +RF  +QS WF ++ G F  IVSNPPYI S ++  L  EV  F
Sbjct: 145 ADALGTARSNAERHGLQDRFQAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKF 204

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           DP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE++    + + 
Sbjct: 205 DPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSV 264

Query: 251 KDYGGNDRVLLFC 263
           KDYG NDR L+F 
Sbjct: 265 KDYGQNDRALMFA 277


>gi|190893590|ref|YP_001980132.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CIAT 652]
 gi|190698869|gb|ACE92954.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CIAT 652]
          Length = 286

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 118/253 (46%), Positives = 159/253 (62%), Gaps = 3/253 (1%)

Query: 14  VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           V GL   SS +++      L   Q   ++ A+ R L HE +HRILG R+FY + L LS++
Sbjct: 32  VAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 91

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P   G+G DIS
Sbjct: 92  TLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPEASGIGSDIS 151

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL  A+SNA  +G+ +RF  +QS WF ++ G F  IVSNPPYI S ++  L  EV  F
Sbjct: 152 ADALGTARSNAERHGLQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKF 211

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           DP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE++    + + 
Sbjct: 212 DPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSV 271

Query: 251 KDYGGNDRVLLFC 263
           KDYG NDR L+F 
Sbjct: 272 KDYGQNDRALMFA 284


>gi|13472969|ref|NP_104536.1| protoporphyrinogen oxidase, hemK protein [Mesorhizobium loti
           MAFF303099]
 gi|18202648|sp|Q98G94|HEMK_RHILO RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MloHemKP
 gi|14023717|dbj|BAB50322.1| protoporphyrinogen oxidase; HemK [Mesorhizobium loti MAFF303099]
          Length = 290

 Score =  232 bits (592), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 157/257 (61%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   +G +  Q I DP+  +D      +  A+ R    E +HRILG+R+FY +RL
Sbjct: 31  DARLIVEHFSGTTRTQAIADPERTIDSNAIAAIDAALGRRAGGEPVHRILGYREFYGLRL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P     
Sbjct: 91  SLSPETLEPRPDTETLVEAVLPFVKAMAAREGTCRILDLGTGTGAIALALLSAVPAATAT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS  AL  A  NA   G+  RF T+QSDWF  V G + VI +NPPYI +  +  L  
Sbjct: 151 GVDISAGALATAARNAGELGLGGRFTTVQSDWFEKVSGRYHVIAANPPYIPTRDIGNLQD 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRDFDPR++LDGG+DGL+ YR IA   +R L  +   +VEIG+ Q+ +V  IF++    
Sbjct: 211 EVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAESRIAVEIGHTQRDEVTDIFKAAGYA 270

Query: 246 LVNAFKDYGGNDRVLLF 262
            V A +D GGNDRVL+F
Sbjct: 271 SVAALRDLGGNDRVLVF 287


>gi|222149910|ref|YP_002550867.1| protoporphyrinogen oxidase [Agrobacterium vitis S4]
 gi|221736892|gb|ACM37855.1| protoporphyrinogen oxidase [Agrobacterium vitis S4]
          Length = 293

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/262 (45%), Positives = 167/262 (63%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+ + +  + GL+S  +IV  + VL   +   +  A+ R L  E +HRILG R FY 
Sbjct: 27  APRDARTLIAGLLGLTSTDLIVQDNRVLSAEETSLIETAVERRLLFEPVHRILGRRAFYG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS  T EPRP+TE+L++  L      + K   VR+LD+GTGTGA+ LALL+E P  
Sbjct: 87  LELALSPATLEPRPDTEILIERVLPHLHAMVAKNGSVRLLDMGTGTGAIALALLQECPGT 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  DIS +AL +A+ NA  N +S+RF+TLQS W+ ++ G FD+I+SNPPYI S ++  
Sbjct: 147 TALATDISAEALAMARQNAAANSLSDRFETLQSHWYEALSGRFDIILSNPPYIVSDVIKD 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VR +DP ++LDGG DGL  YR IA G +  L   GL  VEIGY+Q + V ++F + 
Sbjct: 207 LAPDVRLYDPAVALDGGDDGLDAYRAIAAGAADFLKPGGLVGVEIGYDQAMAVTQLFANN 266

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
              LV + KD+G NDR+LLF +
Sbjct: 267 SFVLVESAKDHGDNDRILLFAQ 288


>gi|319781346|ref|YP_004140822.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167234|gb|ADV10772.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 290

 Score =  221 bits (563), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 117/259 (45%), Positives = 157/259 (60%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   +G +  Q I DP+  +       +  A+ R    E +HRILG+R+FY +RL
Sbjct: 29  DARLIVEHFSGTTRTQAIADPERRVGAGAVAEIDAALRRRAGGEPVHRILGYREFYGLRL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P     
Sbjct: 89  SLSPETLEPRPDTETLVEAILPFVKAVATQEGECRILDLGTGTGAIALALLSVVPTANAT 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD+S  AL  A  NA   G++ RF  LQSDWF  V G + VIV+NPPYI S  +  L  
Sbjct: 149 GVDLSAGALATAARNAGQLGLAGRFTALQSDWFEKVSGRYHVIVANPPYISSEDIGNLQD 208

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV +FDPR++LDGG DGL+ YRTIA   +R L  +G  +VEIG+ Q+ +V  IF +    
Sbjct: 209 EVLNFDPRLALDGGADGLNPYRTIAAEAARFLEIEGRIAVEIGHTQRNEVCEIFTAAGYV 268

Query: 246 LVNAFKDYGGNDRVLLFCR 264
             + F+D GGNDRV++F R
Sbjct: 269 PGSVFRDLGGNDRVIVFER 287


>gi|218660371|ref|ZP_03516301.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli IE4771]
          Length = 215

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 107/213 (50%), Positives = 141/213 (66%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +HRILG R+FY + L LS++T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA
Sbjct: 1   MHRILGEREFYGLPLQLSAETREPRPDTEILVDTVLAYLKDLAKVHGHLHILDIGTGTGA 60

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +CLALL E P   G+G DIS  AL  A+SNA  NG+ +RF  +QS WF  ++G F  IVS
Sbjct: 61  ICLALLSECPEASGIGSDISADALGTARSNAERNGLQDRFQAVQSRWFEDIQGSFHAIVS 120

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S ++  L  EV  FDP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+
Sbjct: 121 NPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYD 180

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q+ DV  IFE++    + + KDYG NDR L+F 
Sbjct: 181 QRNDVTAIFEAKGFSCLKSVKDYGQNDRALIFA 213


>gi|15966363|ref|NP_386716.1| putative methyltransferase protein [Sinorhizobium meliloti 1021]
 gi|307313050|ref|ZP_07592677.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti BL225C]
 gi|307321057|ref|ZP_07600463.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti AK83]
 gi|15075634|emb|CAC47189.1| Putative methyltransferase [Sinorhizobium meliloti 1021]
 gi|306893332|gb|EFN24112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti AK83]
 gi|306899369|gb|EFN30003.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti BL225C]
          Length = 293

 Score =  216 bits (550), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 112/222 (50%), Positives = 149/222 (67%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R   HE ++RILG R+F+ ++L LS +T EPRP+TE+LVD  +  +      +   R
Sbjct: 62  AVERRAAHEPVYRILGEREFFGLKLKLSKETLEPRPDTEILVDCLIPHARRIASSKGSCR 121

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTGTGA+CLALL      +G+G DIS  AL  A  NA  NG++ERF T++S WF +
Sbjct: 122 IVDLGTGTGAICLALLAAVLDARGLGTDISEDALATALENARRNGLAERFGTVRSKWFEA 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G FD+IVSNPPYI S ++  L  EVR  DP  +LDGG DGL  YR IA    RHL  D
Sbjct: 182 VDGRFDIIVSNPPYIRSNVIPELEPEVRYHDPVAALDGGEDGLDAYRAIASHAGRHLETD 241

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           G+  +EIG++QK  V  +FE++   L++A KD GGNDRVL+F
Sbjct: 242 GVIGLEIGFDQKRAVTALFEAQGFRLLSAAKDLGGNDRVLVF 283


>gi|110635327|ref|YP_675535.1| HemK family modification methylase [Mesorhizobium sp. BNC1]
 gi|110286311|gb|ABG64370.1| [protein release factor]-glutamine N5-methyltransferase
           [Chelativorans sp. BNC1]
          Length = 288

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/243 (46%), Positives = 149/243 (61%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           Q I  P+  ++      +  A+ R +  E +HRILG RDFY ++L LS +T EPRP+TE 
Sbjct: 43  QAITHPECAVEAAVAEKVARAVERRIAGEPVHRILGHRDFYGLKLALSPETLEPRPDTET 102

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LVD  L  +      +   RILDLGTGTGA+ LALL   P  + VG DIS  ALE A+ N
Sbjct: 103 LVDLVLPEARRIANVKKHCRILDLGTGTGAIALALLSVVPEAEAVGTDISEGALETARHN 162

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A  + V+ERF  L+SDWF +V+G FD+IVSNPPYI +  ++ L  EVR+ DP+ +LDGG 
Sbjct: 163 ADMSFVAERFTPLRSDWFRNVDGRFDLIVSNPPYIATAEMETLPREVREHDPKAALDGGP 222

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL  YR IA G   HL ++GL +VE G  QK  V  IF +    +    +D GG DR +
Sbjct: 223 DGLMPYRAIASGARDHLTREGLIAVETGAEQKAAVAAIFAAEGYAVSRTARDLGGRDRAM 282

Query: 261 LFC 263
           LF 
Sbjct: 283 LFA 285


>gi|150397699|ref|YP_001328166.1| HemK family modification methylase [Sinorhizobium medicae WSM419]
 gi|150029214|gb|ABR61331.1| modification methylase, HemK family [Sinorhizobium medicae WSM419]
          Length = 292

 Score =  214 bits (544), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/222 (48%), Positives = 146/222 (65%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R   HE ++RILG R+F  ++L LS +T EPRP+TE +V+  +  +     K+   R
Sbjct: 62  AVERRAAHEPVYRILGEREFSGLKLKLSKETLEPRPDTETMVECLIPHARRIALKKGSCR 121

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTGTGA+CLALL      +G+G DIS  AL  A  NA  NG++ RF+TL+S+W  +
Sbjct: 122 IVDLGTGTGAICLALLDAVLDARGLGTDISEDALATACENARRNGLAGRFETLRSNWLEA 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G FD+IVSNPPYI S ++  L  EV+  DP  +LDGG DGL+ YR IA    RHL  D
Sbjct: 182 VNGRFDIIVSNPPYIRSNVIPDLEPEVKFHDPAAALDGGEDGLNAYRAIASDAGRHLEPD 241

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           G+  +EIG++QK  V  +FE+    ++ A KD GGNDRVL+F
Sbjct: 242 GVIGLEIGFDQKQAVTALFEAHGFHMLYAAKDLGGNDRVLVF 283


>gi|306842977|ref|ZP_07475611.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Brucella sp. BO2]
 gi|306286905|gb|EFM58430.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Brucella sp. BO2]
          Length = 295

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 152/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +  +  +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGMAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|163843894|ref|YP_001628298.1| HemK family methyltransferase [Brucella suis ATCC 23445]
 gi|189024939|ref|YP_001935707.1| methyltransferase [Brucella abortus S19]
 gi|225628072|ref|ZP_03786107.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo]
 gi|225853307|ref|YP_002733540.1| methyltransferase, HemK family protein [Brucella melitensis ATCC
           23457]
 gi|237816234|ref|ZP_04595227.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus str. 2308 A]
 gi|254690016|ref|ZP_05153270.1| methyltransferase, HemK family protein [Brucella abortus bv. 6 str.
           870]
 gi|254694506|ref|ZP_05156334.1| methyltransferase, HemK family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696131|ref|ZP_05157959.1| methyltransferase, HemK family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700515|ref|ZP_05162343.1| methyltransferase, HemK family protein [Brucella suis bv. 5 str.
           513]
 gi|254707599|ref|ZP_05169427.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254708864|ref|ZP_05170675.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           B2/94]
 gi|254713713|ref|ZP_05175524.1| methyltransferase, HemK family protein [Brucella ceti M644/93/1]
 gi|254715937|ref|ZP_05177748.1| methyltransferase, HemK family protein [Brucella ceti M13/05/1]
 gi|254717938|ref|ZP_05179749.1| methyltransferase, HemK family protein [Brucella sp. 83/13]
 gi|254731049|ref|ZP_05189627.1| methyltransferase, HemK family protein [Brucella abortus bv. 4 str.
           292]
 gi|256030390|ref|ZP_05444004.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256045466|ref|ZP_05448353.1| methyltransferase, HemK family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256158373|ref|ZP_05456271.1| methyltransferase, HemK family protein [Brucella ceti M490/95/1]
 gi|256253792|ref|ZP_05459328.1| methyltransferase, HemK family protein [Brucella ceti B1/94]
 gi|256258271|ref|ZP_05463807.1| methyltransferase, HemK family protein [Brucella abortus bv. 9 str.
           C68]
 gi|256263205|ref|ZP_05465737.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9]
 gi|260169299|ref|ZP_05756110.1| methyltransferase, HemK family protein [Brucella sp. F5/99]
 gi|260545991|ref|ZP_05821731.1| methyltransferase [Brucella abortus NCTC 8038]
 gi|260755552|ref|ZP_05867900.1| modification methylase [Brucella abortus bv. 6 str. 870]
 gi|260758775|ref|ZP_05871123.1| modification methylase [Brucella abortus bv. 4 str. 292]
 gi|260760499|ref|ZP_05872842.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884576|ref|ZP_05896190.1| modification methylase [Brucella abortus bv. 9 str. C68]
 gi|261214823|ref|ZP_05929104.1| modification methylase [Brucella abortus bv. 3 str. Tulya]
 gi|261217700|ref|ZP_05931981.1| modification methylase [Brucella ceti M13/05/1]
 gi|261315086|ref|ZP_05954283.1| modification methylase [Brucella pinnipedialis M163/99/10]
 gi|261316357|ref|ZP_05955554.1| modification methylase [Brucella pinnipedialis B2/94]
 gi|261321453|ref|ZP_05960650.1| modification methylase [Brucella ceti M644/93/1]
 gi|261751019|ref|ZP_05994728.1| modification methylase [Brucella suis bv. 5 str. 513]
 gi|261758812|ref|ZP_06002521.1| methyltransferase [Brucella sp. F5/99]
 gi|265982881|ref|ZP_06095616.1| modification methylase [Brucella sp. 83/13]
 gi|265987429|ref|ZP_06099986.1| modification methylase [Brucella pinnipedialis M292/94/1]
 gi|265991892|ref|ZP_06104449.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265996885|ref|ZP_06109442.1| modification methylase [Brucella ceti M490/95/1]
 gi|294851111|ref|ZP_06791784.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297247115|ref|ZP_06930833.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus bv. 5 str. B3196]
 gi|306838262|ref|ZP_07471112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella sp. NF 2653]
 gi|163674617|gb|ABY38728.1| methyltransferase, HemK family [Brucella suis ATCC 23445]
 gi|189020511|gb|ACD73233.1| Methyltransferase [Brucella abortus S19]
 gi|225616897|gb|EEH13944.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo]
 gi|225641672|gb|ACO01586.1| methyltransferase, HemK family protein [Brucella melitensis ATCC
           23457]
 gi|237788301|gb|EEP62516.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus str. 2308 A]
 gi|260096098|gb|EEW79974.1| methyltransferase [Brucella abortus NCTC 8038]
 gi|260669093|gb|EEX56033.1| modification methylase [Brucella abortus bv. 4 str. 292]
 gi|260670931|gb|EEX57752.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675660|gb|EEX62481.1| modification methylase [Brucella abortus bv. 6 str. 870]
 gi|260874104|gb|EEX81173.1| modification methylase [Brucella abortus bv. 9 str. C68]
 gi|260916430|gb|EEX83291.1| modification methylase [Brucella abortus bv. 3 str. Tulya]
 gi|260922789|gb|EEX89357.1| modification methylase [Brucella ceti M13/05/1]
 gi|261294143|gb|EEX97639.1| modification methylase [Brucella ceti M644/93/1]
 gi|261295580|gb|EEX99076.1| modification methylase [Brucella pinnipedialis B2/94]
 gi|261304112|gb|EEY07609.1| modification methylase [Brucella pinnipedialis M163/99/10]
 gi|261738796|gb|EEY26792.1| methyltransferase [Brucella sp. F5/99]
 gi|261740772|gb|EEY28698.1| modification methylase [Brucella suis bv. 5 str. 513]
 gi|262551353|gb|EEZ07343.1| modification methylase [Brucella ceti M490/95/1]
 gi|263002900|gb|EEZ15251.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093127|gb|EEZ17262.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659626|gb|EEZ29887.1| modification methylase [Brucella pinnipedialis M292/94/1]
 gi|264661473|gb|EEZ31734.1| modification methylase [Brucella sp. 83/13]
 gi|294819700|gb|EFG36699.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297174284|gb|EFH33631.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus bv. 5 str. B3196]
 gi|306406665|gb|EFM62894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella sp. NF 2653]
 gi|326409871|gb|ADZ66936.1| Methyltransferase [Brucella melitensis M28]
 gi|326539584|gb|ADZ87799.1| methyltransferase, HemK family protein [Brucella melitensis M5-90]
          Length = 295

 Score =  208 bits (529), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|256112205|ref|ZP_05453126.1| methyltransferase, HemK family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|265993633|ref|ZP_06106190.1| modification methylase [Brucella melitensis bv. 3 str. Ether]
 gi|262764614|gb|EEZ10535.1| modification methylase [Brucella melitensis bv. 3 str. Ether]
          Length = 295

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVGALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|62290729|ref|YP_222522.1| hypothetical protein BruAb1_1847 [Brucella abortus bv. 1 str.
           9-941]
 gi|261220925|ref|ZP_05935206.1| modification methylase [Brucella ceti B1/94]
 gi|62196861|gb|AAX75161.1| HemK [Brucella abortus bv. 1 str. 9-941]
 gi|260919509|gb|EEX86162.1| modification methylase [Brucella ceti B1/94]
          Length = 290

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 26  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 86  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 146 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 205

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 206 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 265

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 266 LAGEANDLGGHRRAMLFGQ 284


>gi|82700641|ref|YP_415215.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar
           Abortus 2308]
 gi|148560045|ref|YP_001259696.1| protein-(glutamine-N5) methyltransferase [Brucella ovis ATCC 25840]
 gi|256370268|ref|YP_003107779.1| hemK protein [Brucella microti CCM 4915]
 gi|82616742|emb|CAJ11827.1| SAM (and some other nucleotide) binding motif:N-6 Adenine-specific
           DNA methylase:N6 adenine-specific DNA methyltransferase,
           N [Brucella melitensis biovar Abortus 2308]
 gi|148371302|gb|ABQ61281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella ovis ATCC 25840]
 gi|256000431|gb|ACU48830.1| hemK protein [Brucella microti CCM 4915]
          Length = 283

 Score =  208 bits (529), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 19  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 79  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 139 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 199 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 258

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 259 LAGEANDLGGHRRAMLFGQ 277


>gi|306844841|ref|ZP_07477424.1| glutamine-N5 methyltransferase, release factor-specific [Brucella
           sp. BO1]
 gi|306274773|gb|EFM56554.1| glutamine-N5 methyltransferase, release factor-specific [Brucella
           sp. BO1]
          Length = 295

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATCLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQIIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|161619786|ref|YP_001593673.1| HemK family methyltransferase [Brucella canis ATCC 23365]
 gi|254704886|ref|ZP_05166714.1| HemK family methyltransferase [Brucella suis bv. 3 str. 686]
 gi|260567640|ref|ZP_05838110.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|261755580|ref|ZP_05999289.1| modification methylase [Brucella suis bv. 3 str. 686]
 gi|161336597|gb|ABX62902.1| methyltransferase, HemK family [Brucella canis ATCC 23365]
 gi|260157158|gb|EEW92238.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|261745333|gb|EEY33259.1| modification methylase [Brucella suis bv. 3 str. 686]
          Length = 295

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE L++  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|17986476|ref|NP_539110.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|260562789|ref|ZP_05833275.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|17982075|gb|AAL51374.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|260152805|gb|EEW87897.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
          Length = 295

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALAKARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LAGEANDLGGHRRAMLFGQ 289


>gi|23502721|ref|NP_698848.1| hemK protein [Brucella suis 1330]
 gi|23348736|gb|AAN30763.1| hemK protein [Brucella suis 1330]
          Length = 283

 Score =  207 bits (527), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 105/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 19  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE L++  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 79  RLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 139 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 199 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 258

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 259 LAGEANDLGGHRRAMLFGQ 277


>gi|256059848|ref|ZP_05450035.1| methyltransferase, HemK family protein [Brucella neotomae 5K33]
 gi|261323818|ref|ZP_05963015.1| modification methylase [Brucella neotomae 5K33]
 gi|261299798|gb|EEY03295.1| modification methylase [Brucella neotomae 5K33]
          Length = 295

 Score =  206 bits (524), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY +  
Sbjct: 31  DARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLPF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G+
Sbjct: 91  RLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHGI 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L  
Sbjct: 151 GVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLSR 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S    
Sbjct: 211 EVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGFS 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L     D GG+ R +LF +
Sbjct: 271 LACEANDLGGHRRAMLFGQ 289


>gi|227823187|ref|YP_002827159.1| putative modification methylase, HemK family [Sinorhizobium fredii
           NGR234]
 gi|227342188|gb|ACP26406.1| putative modification methylase, HemK family [Sinorhizobium fredii
           NGR234]
          Length = 298

 Score =  204 bits (520), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 105/212 (49%), Positives = 142/212 (66%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           ++RILG R+F+ +   LS +T EPRP+TE LVD  + +      ++   R++D+GTGTGA
Sbjct: 72  VYRILGEREFHGLTFRLSKETLEPRPDTETLVDCLIPYVRRIAARKGCCRLIDMGTGTGA 131

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +CLALL  +   +G G DIS  AL  A+ NA  NG+++RF TL+SDWF +VEG FD+IVS
Sbjct: 132 ICLALLAAALEARGFGTDISEDALATARENAKRNGLADRFQTLRSDWFETVEGRFDIIVS 191

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S +V  L  EVR  DP  +LDGG DGL  YR IA    RHL  DG+  +EIG++
Sbjct: 192 NPPYIRSSVVGELEPEVRYHDPAAALDGGNDGLDVYRAIAQHAGRHLETDGVVGLEIGFD 251

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           QK  V  +F+++   L+ +  D GGNDRVL+F
Sbjct: 252 QKHAVTALFQAQGFRLLESAMDLGGNDRVLIF 283


>gi|319408171|emb|CBI81824.1| Methylase [Bartonella schoenbuchensis R1]
          Length = 288

 Score =  201 bits (512), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 111/258 (43%), Positives = 147/258 (56%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  VTG +    I+ P+  L  +Q   L  AI R +  E  HRI+G RDFY + L
Sbjct: 28  DAKLLVEWVTGTTPTDRILQPNMRLSSKQIAQLKKAIQRRIAGEPTHRIIGKRDFYGISL 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TLS DT EPRP+TE LVD  L     ++EK      LD+GTG+GA+ +A+LK+      +
Sbjct: 88  TLSQDTLEPRPDTETLVDLVLPILKKQVEKTGKATFLDMGTGSGAIAIAILKQIIQTYAI 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDIS  AL+ A  NA    +++RF  L SDWF+SV G FD+IVSNPPYI    V  L  
Sbjct: 148 AVDISEDALKTATKNAKHADIAQRFTPLLSDWFTSVTGQFDLIVSNPPYIPEKDVQNLAK 207

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DP  +L GG DGL  YR +A   + HL +    +VEIGY+Q+ +V  +F+     
Sbjct: 208 EVRLHDPLRALVGGKDGLDFYRKLAHESANHLKEKAYVAVEIGYSQQKEVCDLFKKNGFE 267

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +   KD  G  R LLF 
Sbjct: 268 YLKMRKDLNGIPRALLFS 285


>gi|153008372|ref|YP_001369587.1| HemK family modification methylase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560260|gb|ABS13758.1| modification methylase, HemK family [Ochrobactrum anthropi ATCC
           49188]
          Length = 287

 Score =  201 bits (510), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/254 (41%), Positives = 155/254 (61%), Gaps = 8/254 (3%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
            TG +   +I  P+ ++D      L++A+ R  K E +HRI+G R+F+ +   LS+ T E
Sbjct: 33  ATGKTRLDLISAPEQLVDSAVIETLSDALDRREKGEPVHRIMGVREFFGLPFRLSAATLE 92

Query: 74  PRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           PRP+TE+LV+      +P +E    +++ + +LD+GTGTGA+ ++LL       G+G+D+
Sbjct: 93  PRPDTEVLVE----LVIPALEALAVQKNTLELLDMGTGTGAIIISLLHRFERTHGIGLDM 148

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +  AL +A+ NAV NGV +RF  L+SDWF +V G F +IVSNPPYI    +  L  EVR+
Sbjct: 149 AEGALAMARINAVANGVGDRFAALKSDWFENVSGRFHLIVSNPPYIPHEDIAGLSREVRE 208

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            DP  +LDGG DGL+ YR +A   + HL K G+ +VEIG  Q  DV  +FES    L   
Sbjct: 209 HDPLAALDGGSDGLNFYRALAQKAADHLYKQGMVAVEIGAGQFQDVEALFESAGFSLAGH 268

Query: 250 FKDYGGNDRVLLFC 263
             D GG+ R +LF 
Sbjct: 269 ASDLGGHRRAMLFA 282


>gi|239832946|ref|ZP_04681275.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ochrobactrum intermedium LMG 3301]
 gi|239825213|gb|EEQ96781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ochrobactrum intermedium LMG 3301]
          Length = 290

 Score =  200 bits (508), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 151/250 (60%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
            TG +   +I  P+ ++D      L +A+ R  K E +HRI+G R+F+ +   LS++T E
Sbjct: 36  ATGRTRLDLISAPEQLVDGAAIQTLCDALERRAKGEPVHRIMGVREFFGLPFRLSTETLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LV+  +       ++ + + +LD+GTGTGA+ ++LL       GVG+D++  A
Sbjct: 96  PRPDTEALVELVIPALDVLAQQENTLELLDMGTGTGAIIISLLHRFERAHGVGLDMAEGA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L +A+ NA+ NGV +RF  L+SDWF  V G F +IVSNPPYI    +  L  EVR+ DP 
Sbjct: 156 LVMARINAIANGVGDRFAALKSDWFQHVSGRFHLIVSNPPYIPHEDIAGLSREVREHDPL 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +LDGG+DGL+ YR +A   + HL + G+ +VEIG  Q  DV  +FES    L     D 
Sbjct: 216 AALDGGVDGLNFYRALAQKAADHLYRKGMVAVEIGAGQFQDVEALFESAGFSLAGHASDL 275

Query: 254 GGNDRVLLFC 263
           GG+ R +LF 
Sbjct: 276 GGHRRAMLFA 285


>gi|240849862|ref|YP_002971250.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup]
 gi|240266985|gb|ACS50573.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup]
          Length = 288

 Score =  196 bits (498), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 148/258 (57%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +TG+++ + I  PD  L       +  A+ R +  E ++RI+G R+FY +  
Sbjct: 28  DAKILVEWITGINAAERISKPDMHLSSEHIIQIEQALQRRIAGEPVYRIIGAREFYGISF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TLS +T EPRP+TE L+D  L F   ++E       LD+GTG+GA+ + LLK+ P    V
Sbjct: 88  TLSQETLEPRPDTETLIDLVLPFLQKQVENSGRTTFLDMGTGSGAIAITLLKQIPQSYAV 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDIS  AL+ AK NA    V+ RF  L SDWF +V   FD IVSNPPYI +  +  L  
Sbjct: 148 AVDISEDALKTAKKNAKNAEVAHRFTPLLSDWFDAVADRFDFIVSNPPYIPAQDIKKLAK 207

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR +DP  +L GG DGL  YR +A   + +L ++G  +VEIGY+Q+ +V  +F+     
Sbjct: 208 EVRLYDPLRALMGGEDGLYFYRKLAHEAANYLKENGYVAVEIGYSQENEVCNLFKKNGFQ 267

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +   KD  G  R LLF 
Sbjct: 268 CLEVRKDLSGIPRALLFA 285


>gi|319407579|emb|CBI81229.1| Methylase [Bartonella sp. 1-1C]
          Length = 288

 Score =  195 bits (495), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 145/250 (58%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY +  TLS DT E
Sbjct: 36  ITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LVD  L      +EK +   +LD+GTG+GA+ +A+LK+ P    V VDIS  A
Sbjct: 96  PRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    +  L  EVR  DP 
Sbjct: 156 LKTATKNAQHANVAHRFTPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPW 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L+GG DGL  YR +A   + +L +    +VEIGY+Q+  V  +FE      +   +D 
Sbjct: 216 CALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEKNGFKCLKIREDL 275

Query: 254 GGNDRVLLFC 263
               R LLF 
Sbjct: 276 NRIPRALLFS 285


>gi|319404589|emb|CBI78195.1| Methylase [Bartonella rochalimae ATCC BAA-1498]
          Length = 288

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 145/250 (58%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY +  TLS DT E
Sbjct: 36  ITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LVD  L      +EK +   +LD+GTG+GA+ +A+LK+ P    V VDIS  A
Sbjct: 96  PRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    +  L  EVR  DP 
Sbjct: 156 LKTATKNAQHANVAHRFIPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPW 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L+GG DGL  YR +A   + +L +    +VEIGY+Q+  V  +FE      +   +D 
Sbjct: 216 RALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEKNGFKCLKIREDL 275

Query: 254 GGNDRVLLFC 263
               R LLF 
Sbjct: 276 NKIPRALLFS 285


>gi|170742858|ref|YP_001771513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium sp. 4-46]
 gi|168197132|gb|ACA19079.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium sp. 4-46]
          Length = 295

 Score =  194 bits (493), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 3/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G+S   +++  D  LD+ Q   L+ A+ R    E + RILG  +F+ +  
Sbjct: 33  DARLILTETLGVSRVDLLLGADGPLDEAQARSLSAALRRRASGEPVARILGAWEFWGLPF 92

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS DT  PRP+TE LV++AL    PR      +R+LDLGTG+G + +ALL E P  +GV
Sbjct: 93  RLSPDTLVPRPDTETLVEAALDLGHPRDA---ALRLLDLGTGSGCLLVALLSEWPRAEGV 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D+S +AL  A++NA  NGV  R   L+ DW +++ G FDV V+NPPYI + ++  L  
Sbjct: 150 GIDLSLEALRTARANAARNGVGARAAWLRGDWAAALAGRFDVAVANPPYIAANLIPGLAP 209

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DPR++LDGG DGL  YR I    +  L   G   VEIGY+Q+  +  + E+  L 
Sbjct: 210 EVRDHDPRLALDGGADGLDCYRVILAQAADFLAPGGHLVVEIGYDQEEALRHLAEAAGLR 269

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +V   +D  G+ R  L  R
Sbjct: 270 VVVVRRDLAGHPRAALLAR 288


>gi|319899229|ref|YP_004159322.1| Methylase [Bartonella clarridgeiae 73]
 gi|319403193|emb|CBI76752.1| Methylase [Bartonella clarridgeiae 73]
          Length = 288

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 143/249 (57%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY +   LS DT E
Sbjct: 36  ITGTNASDRILRPNMCLSSKQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFALSKDTLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LVD  +      +EK +   +LD+GTG+GA+ +A+LK+ P    V VDIS  A
Sbjct: 96  PRPDTETLVDLVVPILKTHLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    +  L  EVR  DP 
Sbjct: 156 LKTATKNAQHANVAHRFAPLLSNWFDSIKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPL 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L GG DGL  YR +A     +L + G  +VEI Y+Q+  V  +FE      +   +D 
Sbjct: 216 RALIGGKDGLDFYRKLAHESENYLKEKGHIAVEISYSQEKKVCDLFEKNGFKCLKIREDL 275

Query: 254 GGNDRVLLF 262
            G  R LLF
Sbjct: 276 NGIPRALLF 284


>gi|319406094|emb|CBI79724.1| Methylase [Bartonella sp. AR 15-3]
          Length = 288

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 144/249 (57%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           VTG ++   I+ P+  L   Q   L  AI R +  E ++RI+G R+FY +  TLS DT E
Sbjct: 36  VTGTTASDRILQPNMCLSSEQLVQLEQAINRRIAGEPVYRIIGTREFYGIPFTLSKDTLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE +VD  L      +EK +   +LD+GTG+GA+ +A+LK+ P    V VDIS  A
Sbjct: 96  PRPDTETVVDLVLPILKTYLEKSEQATLLDMGTGSGAIAIAILKQIPQTYAVAVDISEDA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+ A  NA    V+ RF  L S+WF SV+G FD+I+SNPPYI    +  L  EVR  DP 
Sbjct: 156 LKTATKNAQHANVAHRFTPLLSNWFDSVKGQFDLIISNPPYIPEKEIKNLAKEVRQHDPL 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L GG DGL  YR +A   + +L +    +VEIGY+Q+ +V  +F+      +   +D 
Sbjct: 216 RALIGGKDGLDFYRKLAHESANYLKEKSYIAVEIGYSQEKEVCDLFKKNGFKCLKIREDL 275

Query: 254 GGNDRVLLF 262
               R LLF
Sbjct: 276 NRIPRALLF 284


>gi|121601994|ref|YP_988677.1| HemK family methyltransferase [Bartonella bacilliformis KC583]
 gi|120614171|gb|ABM44772.1| methyltransferase, HemK family [Bartonella bacilliformis KC583]
          Length = 288

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/261 (40%), Positives = 150/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  VT  S+   I+ PD  L  +Q   L  AI R +  E  HRI+G R+FY
Sbjct: 24  EANLDTKLLVEWVTSTSTIDRILQPDMCLSSQQIAQLEEAIKRRISGEPTHRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS +T EPRP+TE+L+D  L     +++K     +LD+GTGTGA+ +A+LK+   
Sbjct: 84  GISFALSKETLEPRPDTEILIDLVLPILKKKVKKSGKATLLDMGTGTGAIAIAILKQVVQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDI+  AL+ A  NA    V  RF  L S+WF++V G FD+I+SNPPYI    + 
Sbjct: 144 TCAVAVDIAEDALKTATQNAKNADVLHRFTPLLSNWFNTVTGQFDLIISNPPYIPEKDIP 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR +DP  +L GG DGL  YR +AD  + +L ++G  +VEIGY+QK +V  +FE 
Sbjct: 204 NLAKEVRQYDPLRALIGGKDGLDFYRKLADESATYLKEEGYIAVEIGYSQKKEVCNLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +    D  G  R +LF
Sbjct: 264 NGFKCLKIRDDLSGIPRAILF 284


>gi|220920162|ref|YP_002495463.1| modification methylase, HemK family [Methylobacterium nodulans ORS
           2060]
 gi|219944768|gb|ACL55160.1| modification methylase, HemK family [Methylobacterium nodulans ORS
           2060]
          Length = 299

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 155/262 (59%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+RD+   L     L S  +++  D  L+ R+   L+ A++R  + E + RILG  +F+ 
Sbjct: 30  AMRDARLLLIETLNLRSIDLVLAGDRELEAREAARLSAALLRRAEGEPVARILGAWEFWG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS  T  PRP+TE +V++ALA  L   E+   +R+LDLGTG+G + +ALL E P  
Sbjct: 90  LPFRLSPATLVPRPDTETVVEAALALGL---ERTAPIRLLDLGTGSGCLLVALLSEWPCA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D + +AL  A+ NA  NGV  R   +Q DW  S+ G FDVIV+NPPYI S ++D 
Sbjct: 147 TGLGIDRAREALVTARDNADQNGVGARALWVQGDWAGSLRGPFDVIVANPPYIASRMIDG 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR  DPR++LDGG DGL  YR I    +  L   G   VEIGY+Q+  +  + E+ 
Sbjct: 207 LADEVRVHDPRMALDGGSDGLDAYRVILGQAAVLLAPGGRLIVEIGYDQEEALRHLAEAA 266

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
           +L +V   +D  G+ R ++  R
Sbjct: 267 RLQVVVVRRDLAGHPRAVVMAR 288


>gi|163867490|ref|YP_001608689.1| methylase [Bartonella tribocorum CIP 105476]
 gi|161017136|emb|CAK00694.1| Methylase [Bartonella tribocorum CIP 105476]
          Length = 288

 Score =  188 bits (478), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/263 (39%), Positives = 147/263 (55%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++A  D+   +  +TG+++   I  PD  L       +  AI R +  E ++RI+G R+F
Sbjct: 23  LEADLDAKVLVEWITGINAATRISKPDMHLSSEHIRQIEQAIKRRIAGEPVYRIIGAREF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   LS +T EPRP+TE L+D  L F   +++       LD+GTG+GA+ +A+LK+ P
Sbjct: 83  YGISFALSQETLEPRPDTETLIDLVLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIP 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V VDIS  AL+ A  NA    V  RF  L SDWF SV   FD IVSNPPYI    +
Sbjct: 143 QSYAVAVDISEDALKTATKNAKNADVIHRFTPLLSDWFDSVTDRFDFIVSNPPYIPEKDI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR  DP  +L GG DGL  YR +A   + +L ++G  +VEIGY+Q+ +V  +F+
Sbjct: 203 NKLAKEVRLHDPLRALIGGKDGLDFYRKLAHEAANYLKENGTIAVEIGYSQEKEVCDLFK 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   KD  G  R LLF 
Sbjct: 263 KNGFQCLEMRKDLNGIPRALLFA 285


>gi|49475008|ref|YP_033049.1| protoporphyrinogen oxidase protein [Bartonella henselae str.
           Houston-1]
 gi|49237813|emb|CAF27008.1| Protoporphyrinogen oxidase protein [Bartonella henselae str.
           Houston-1]
          Length = 288

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 102/240 (42%), Positives = 138/240 (57%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           ++ PD  L   Q   L  AI R +  E ++RI+G R+FY +   LS +T EPR +TE LV
Sbjct: 45  VLQPDLCLSFEQILQLEKAIQRRIAGEPVYRIIGKREFYGISFALSQETLEPRSDTETLV 104

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L       EK + + +LD+GTG+GA+ +A+LK+ P    V VDIS  AL+ A  NA 
Sbjct: 105 DLVLPPLKKYGEKSEKITLLDMGTGSGAIAIAILKQIPQSYAVAVDISENALKTATKNAK 164

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +  V  RF  L SDWF SV G FD+I+SNPPYI    +  L  EV   DP  +L GG DG
Sbjct: 165 SAKVINRFTPLLSDWFDSVTGQFDLIISNPPYIPETDITKLAKEVHLHDPLRALIGGKDG 224

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  YR ++D  + +L + G  +VEIGY+Q+ +V  +FE      +   KD  G  R LLF
Sbjct: 225 LDFYRKLSDKAANYLKEKGSIAVEIGYSQEKEVCDLFEKNGFKCLEMRKDLNGIPRALLF 284


>gi|49473851|ref|YP_031893.1| protoporphyrinogen oxidase protein [Bartonella quintana str.
           Toulouse]
 gi|49239354|emb|CAF25687.1| Protoporphyrinogen oxidase protein [Bartonella quintana str.
           Toulouse]
          Length = 288

 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/250 (40%), Positives = 139/250 (55%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG ++   I+ PD  L   Q   L  AI R +  E ++RI+G R+FY +   LS +T E
Sbjct: 36  ITGTNASVRILHPDLCLSFEQITQLEQAIQRRINGEPVYRIIGKREFYGISFALSQETLE 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LVD  L      ++K     +LD+GTG+GA+ +A+LK+ P      VDIS  A
Sbjct: 96  PRPDTETLVDLVLPLLKKYVDKLGKTTLLDMGTGSGAIAIAILKQIPQSYATAVDISKDA 155

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+ A  NA    V  RF  L S+WF SV   FD+I+SNPPYI    +  L  EVR  DP 
Sbjct: 156 LKTAIKNAKNAKVIHRFTPLLSNWFDSVTDRFDLIISNPPYIPETDIKNLAKEVRLHDPL 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L GG DGL  YR +A   + +L   G  +VEIG++Q+ +V  +FE      +   +D 
Sbjct: 216 RALIGGKDGLHFYRKLAHEATNYLKTKGSLAVEIGHSQEKEVCDLFEKNGFQFLEMRRDL 275

Query: 254 GGNDRVLLFC 263
            G  R LLF 
Sbjct: 276 SGIPRALLFT 285


>gi|254420535|ref|ZP_05034259.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3]
 gi|196186712|gb|EDX81688.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3]
          Length = 304

 Score =  182 bits (461), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 146/257 (56%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S   ++ DP  V+   Q       I R LK E + RI+G + F+ + L
Sbjct: 39  DARLLLEAAAGASRMDILTDPYRVVTPEQHTAYEAMIDRRLKREPVSRIVGKKGFWKIML 98

Query: 66  TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ D   PRP+TE L+D A LAF+     +      +DLGTG+GA+ LALL E P   G
Sbjct: 99  NVTPDVLSPRPDTETLMDVAMLAFA-----RTQAFSAIDLGTGSGAILLALLAERPAAHG 153

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           VG DIS +AL +AK NA    +++R   L+++W +   +  FD+++SNPPYI +  +  L
Sbjct: 154 VGTDISTEALAVAKENAANLDLNDRAAFLRTEWAAGFGDASFDLVLSNPPYIPTDHIPTL 213

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD DP ++LDGG DGL  YR +A  V R L   G+ +VEIG++Q   V  +FE++ 
Sbjct: 214 DPEVRDHDPHLALDGGPDGLQAYRDLAPEVKRILKPGGVFAVEIGWDQGPQVKALFEAQG 273

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   KD G  DRV+
Sbjct: 274 FADVKVVKDLGERDRVV 290


>gi|302381613|ref|YP_003817436.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302192241|gb|ADK99812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 294

 Score =  181 bits (460), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/257 (39%), Positives = 147/257 (57%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   +G S   ++ DP   L   Q+  L   + R L+ E + RILG + F+ + L
Sbjct: 29  DARLLLEAASGASRLDILTDPHRPLTPDQQAALAGYLERRLRREPVSRILGRKGFWKIML 88

Query: 66  TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ D   PRP+TE ++D A LAF     E      ++DLGTG+GA+ LA+L E P   G
Sbjct: 89  NVTPDVLSPRPDTETILDVAMLAF-----EPAQAFNVIDLGTGSGAILLAVLSERPGSHG 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           VG DIS +AL +A+ NA   G+  R   L+++W +   +  FD++VSNPPYI S  +  L
Sbjct: 144 VGTDISSEALAVARENAANLGLDGRATFLRTEWAAGFGDASFDLVVSNPPYIPSGDIPGL 203

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD DP ++LDGG DGL  YR +A  ++R L   G+ +VEIG++Q   V  +FE+  
Sbjct: 204 DPEVRDHDPVLALDGGPDGLQAYRDLAPEIARILKPGGVFAVEIGWDQGPQVKALFEAAG 263

Query: 244 LFLVNAFKDYGGNDRVL 260
           L  V   KD G   RV+
Sbjct: 264 LTDVKVVKDLGDRHRVV 280


>gi|114704326|ref|ZP_01437234.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506]
 gi|114539111|gb|EAU42231.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506]
          Length = 298

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 144/248 (58%), Gaps = 7/248 (2%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L+  +  ++PD+     +RF  T  I R    E +HRILG R FY     LS+ T EPRP
Sbjct: 49  LARRERPIEPDA----EERF--TAYISRRRSGEPVHRILGKRGFYGHDFELSAGTLEPRP 102

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +TE++V+  +AF L  +++   +R+LD+GTG+G + L++L   P     G DIS  AL  
Sbjct: 103 DTEIVVEMGIAF-LRTVDRDRPLRVLDIGTGSGVIALSILVALPHTHAFGTDISEDALAT 161

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA    V  RF+T  +D+ + + G  D+ +SNPPYI +  +  L  EVRDFDP+ +L
Sbjct: 162 ARRNAKRLKVDARFETSVTDYAAGITGPLDLAISNPPYIATRDIAGLSSEVRDFDPKSAL 221

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           DGG DGL  YR IA  V   L  DG   VEIG +QK  V RIFE+    L +  KDYGG 
Sbjct: 222 DGGEDGLKAYRAIAAQVRSVLADDGSVVVEIGIDQKDPVTRIFEACGFTLSDWRKDYGGI 281

Query: 257 DRVLLFCR 264
            R L F R
Sbjct: 282 VRALRFSR 289


>gi|115522191|ref|YP_779102.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisA53]
 gi|115516138|gb|ABJ04122.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisA53]
          Length = 313

 Score =  178 bits (451), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/250 (40%), Positives = 142/250 (56%), Gaps = 1/250 (0%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V GL   Q+++  + VL   Q   L +   R +  E + RILG ++F+ + L
Sbjct: 53  DARLLVGEVAGLDLTQLVLAAERVLTPEQAIRLEDFARRRIAGEPVARILGHQEFWGLTL 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS DT  PRP+TE +V++AL  +    + R  +RI DLGTGTGA+ LALL E P  +GV
Sbjct: 113 QLSPDTLVPRPDTETMVEAALDLARDWTD-RAALRIADLGTGTGAILLALLSEWPNARGV 171

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+SC+AL  A+ NA   G+  R   +  D+ ++++G FD+IVSNPPYI +  +  L +
Sbjct: 172 ATDLSCEALRTARGNADRLGLGARTRFVACDYAAALKGPFDLIVSNPPYIPAAEIATLAV 231

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV D DPR +LDGG DGL  YR IA   +  L+  G   VE+G  Q   V  +  +  L 
Sbjct: 232 EVSDHDPRRALDGGDDGLDAYRAIAPQAAALLSPGGALIVEVGQGQSEPVAGLMAASGLT 291

Query: 246 LVNAFKDYGG 255
           L     D GG
Sbjct: 292 LDAPRPDLGG 301


>gi|170746588|ref|YP_001752848.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653110|gb|ACB22165.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium radiotolerans JCM 2831]
          Length = 299

 Score =  176 bits (447), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 3/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  + GL +  +++D    L       L  A+ R L  E + RILG  +F+
Sbjct: 29  EAAGDARFLLLGILGLETRDLLIDGSRRLGPADAASLAAALARRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  DT  PRP+TE+LV+ ALA    R ++   +R LDLGTG+G +  ALL E P 
Sbjct: 89  GLPFRLGPDTLVPRPDTEILVEVALAA---RPDRAAPLRCLDLGTGSGCILTALLSERPR 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG+D S  AL +A+ NAVTNGV +R   +  DW  ++ G FD++VSNPPYI   ++ 
Sbjct: 146 ATGVGLDRSEGALRVARDNAVTNGVGDRARFVAGDWCDALWGCFDLVVSNPPYIARAVIG 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +LDGG DGL  YR I  G    L   GL  +EIGY+Q   V  +  +
Sbjct: 206 TLEREVRGHDPAAALDGGADGLEAYRRILGGAGACLATGGLLVLEIGYDQAAAVTDLARA 265

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                    +D  G+DRVL F R
Sbjct: 266 AGYRARGLTRDLAGHDRVLSFDR 288


>gi|92116090|ref|YP_575819.1| HemK family modification methylase [Nitrobacter hamburgensis X14]
 gi|91798984|gb|ABE61359.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 317

 Score =  176 bits (445), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/218 (44%), Positives = 128/218 (58%), Gaps = 1/218 (0%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E + RILG +DF+ + L LS+DT  PRP+TE +V++AL         R  +RI D
Sbjct: 93  RRLAGEPVARILGTKDFWGLPLKLSADTLVPRPDTETVVEAALEILRAEGRTRTPLRIAD 152

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LALL E P   GVG D+S  AL+ AK+NA   G++ R D   SD+   +  
Sbjct: 153 LGTGSGAILLALLSELPDATGVGTDLSAAALDTAKANAQRLGLAPRADFTVSDYAGGLSD 212

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI S  +  L  EVRD DP ++LDGG DGL  YR IA   +  L   GL 
Sbjct: 213 PFDLIVSNPPYIRSADIASLAPEVRDHDPHLALDGGSDGLEAYRRIAPQAAGLLAPGGLL 272

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDRVL 260
            +E+G  Q  DVVR+  +  L +   A  D  G  R +
Sbjct: 273 VLEVGQGQDGDVVRLVAAAGLTVAGPARADLAGIGRAV 310


>gi|163759876|ref|ZP_02166960.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43]
 gi|162282834|gb|EDQ33121.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43]
          Length = 294

 Score =  174 bits (442), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/258 (40%), Positives = 145/258 (56%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   + R+  L+SHQ+  + D  L D  R  +  A    L  + +HRILG RDFY + L
Sbjct: 35  DARLLISRLADLASHQLATNGDLPLTDAVRGKIERAAGERLAGKPVHRILGTRDFYGLSL 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS  T EPRP+TE L+D+ L F   R+ +     I+DLG G G + LAL+ E    + +
Sbjct: 95  KLSGATLEPRPDTETLIDAVLPFVHDRVVQTGCCEIVDLGIGAGGIGLALVAECTQARCL 154

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D+S +A+  A +NA   G+S R+  +  DWF  VE  FD+IVSNPPYI +  +  L  
Sbjct: 155 GIDVSLEAVTTALTNARELGLSARYSAVTGDWFRGVEQHFDLIVSNPPYIPTADIASLSR 214

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV   DP ++LDGG DGL  YR IA      L   G  ++EIG  Q+  V  +F +++  
Sbjct: 215 EVVAHDPLLALDGGKDGLDAYRQIAAQCRTRLKSGGQVALEIGVGQRKSVTELFVAQRFE 274

Query: 246 LVNAFKDYGGNDRVLLFC 263
           L     D GG DRVL+F 
Sbjct: 275 LSQVVADLGGVDRVLVFA 292


>gi|295690768|ref|YP_003594461.1| protein-(glutamine-N5) methyltransferase [Caulobacter segnis ATCC
           21756]
 gi|295432671|gb|ADG11843.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter segnis ATCC 21756]
          Length = 289

 Score =  172 bits (437), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 11/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G++  +++ DP   L   Q   L   + R  + E +  I+G + F+ + L
Sbjct: 27  DARLMLEVAAGVTRTEIVTDPYRELTAEQAAMLDEFLTRRARREPVSHIIGRKGFWKILL 86

Query: 66  TLSSDTFEPRPETELLVDSAL-AF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            ++ +   PRPETE++VD  L AF  ++P         +LDLG G+G + LA+L E P  
Sbjct: 87  QVNKNVLTPRPETEVIVDEVLKAFPEAMP-------FSMLDLGVGSGTILLAVLAERPAA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           KG+GVD S +AL +A+ NA    ++ R   L  DW + + +  FD++ SNPPYI S +++
Sbjct: 140 KGLGVDASSEALAVARDNAANLDLNNRATFLHGDWTAGLADASFDLVASNPPYIPSAVIE 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRD +PR++LDGG DGL  YR +A  + R L   G+ +VEIGY+Q   V  +F +
Sbjct: 200 TLEPEVRDHEPRLALDGGADGLDAYRLLAPEILRVLKPGGMFAVEIGYDQSKAVESLFNA 259

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD   +DRV+
Sbjct: 260 AGAQQVRTTKDLSTHDRVV 278


>gi|83592090|ref|YP_425842.1| modification methylase HemK [Rhodospirillum rubrum ATCC 11170]
 gi|83575004|gb|ABC21555.1| Modification methylase HemK [Rhodospirillum rubrum ATCC 11170]
          Length = 325

 Score =  172 bits (435), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/260 (40%), Positives = 138/260 (53%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+      V GLS   V++  D V+   +   L   I R    E + RILG R F+   
Sbjct: 46  RDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWRFD 105

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L +DT +PRP+TE LV++ LA     + +    RILDLGTG+G + LALL + P   G
Sbjct: 106 LALGADTLDPRPDTETLVEAGLA-----VLEGCGGRILDLGTGSGCILLALLADRPGAIG 160

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+DI+  A+ +A  NA   G+  R      DW ++V G FD+IVSNPPYI S  +  L 
Sbjct: 161 LGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAALE 220

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV  FDP  +LDGG DGL  YR +A  V   L   G+ +VE G  Q  DV  + E   L
Sbjct: 221 PEVARFDPSRALDGGADGLDPYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVGGL 280

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                 KD  G +R LL  R
Sbjct: 281 CPYEIKKDLSGEERCLLARR 300


>gi|91974578|ref|YP_567237.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisB5]
 gi|91681034|gb|ABE37336.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB5]
          Length = 292

 Score =  172 bits (435), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 141/257 (54%), Gaps = 3/257 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  VTGL    +IV  + +L   Q   L   + R L  E + RILG R+F+ + L
Sbjct: 32  DARLLIGEVTGLDLTGLIVQAERLLAPDQAELLDGFVARRLAGEPVARILGAREFWGLPL 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TLS+DT  PRP+TE +V+ AL +   R E      ILD+G G+GA+ LALL E P   GV
Sbjct: 92  TLSADTLVPRPDTETVVEVALEYL--RAEAPARPLILDIGAGSGAILLALLSECPAAFGV 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL  A+SNA+  G+S R      D+ S++ G FD+IVSNPPYI +  +  L  
Sbjct: 150 ATDISLGALRAAQSNAIRLGLSNRAGFAVCDYASALIGPFDLIVSNPPYIPARDIAALDR 209

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DPR +LDGG DGL  YR I     R L   G   VE G  Q  +V  +  +  L 
Sbjct: 210 EVRDHDPRRALDGGDDGLDAYRRIVPESMRLLRPGGALVVEFGQGQSDEVAALMRAAGLT 269

Query: 246 LVNAF-KDYGGNDRVLL 261
           +     +D GG  R L+
Sbjct: 270 VSGPPRRDLGGIFRALM 286


>gi|197104293|ref|YP_002129670.1| modification methylase HemK [Phenylobacterium zucineum HLK1]
 gi|196477713|gb|ACG77241.1| modification methylase HemK [Phenylobacterium zucineum HLK1]
          Length = 287

 Score =  171 bits (434), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 142/245 (57%), Gaps = 7/245 (2%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ DP   L   Q   L + + R  K E +  ILG + F+ + L ++ D   PRP+TE +
Sbjct: 43  IVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKGFWKIMLRVTPDVLTPRPDTETV 102

Query: 82  VDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD AL AF      +     +LDLG G+GA+ LA+L E P  KG+G+D S +AL +A+ N
Sbjct: 103 VDVALKAFP-----EHAPWSVLDLGVGSGAILLAILAERPAAKGLGIDASEEALAVARDN 157

Query: 141 AVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           A   G++ R   L+ DW + + +  FD++VSNPPYI S +++ L  EV+D++PR++L+GG
Sbjct: 158 AAALGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLEPEVKDYEPRLALEGG 217

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR +A  + R L   G  +VEIGY+QK  V  +F +     V   +D    DRV
Sbjct: 218 ADGLDAYRILAPEIVRVLKPGGRFAVEIGYDQKDAVEALFRAAGAEDVRTIRDLADRDRV 277

Query: 260 LLFCR 264
           +   +
Sbjct: 278 VAGAK 282


>gi|192289041|ref|YP_001989646.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris TIE-1]
 gi|192282790|gb|ACE99170.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris TIE-1]
          Length = 289

 Score =  171 bits (434), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 2/246 (0%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V GL    +++  + +L   +   L +   R L+ E + RILG R+F+ +  
Sbjct: 29  DARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSFAARRLRGEPVARILGMREFWGLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+DT  PRP+TE +V++ALA    R       RILD+GTG+GA+ LALL E P   GV
Sbjct: 89  ELSADTLVPRPDTETIVEAALAILAERSSL--APRILDIGTGSGAILLALLHECPDAVGV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL  A+ NA   G+++R   +  D+ S++ G FD+IVSNPPYI    +  L  
Sbjct: 147 ATDISLGALRTARGNAQRLGLADRACFVACDYASALRGPFDLIVSNPPYIPGNEIAALDR 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DPR +LDGG DGL  YR I     R L   G+  VEIG  Q+ DV  + ++  L 
Sbjct: 207 EVRDHDPRRALDGGADGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQASGLT 266

Query: 246 LVNAFK 251
           + + F+
Sbjct: 267 VSDPFR 272


>gi|146277161|ref|YP_001167320.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555402|gb|ABP70015.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC
           17025]
          Length = 278

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 143/259 (55%), Gaps = 10/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A RD+   +    G++  ++ +  PD +L +    F      R+ + + + +I+G R F+
Sbjct: 22  APRDARRLMAHALGIAPDRITLHLPDPLLPEADARFEAALAARTAR-QPVAQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRPFRVTRDTLDPRPETECLIEAALAAPF--------ATLLDLGTGTGCIAITLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GV  D+S  AL +A+ NA+  GV++R D  +SDWF++V   FD+I+SNPPYI +  + 
Sbjct: 133 ARGVATDLSPAALAVAEGNALALGVADRLDCRRSDWFAAVPERFDLILSNPPYIAAHEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+++PR++L    DGL  YR I  G S HL   G   +EIG  Q  DV  +  S
Sbjct: 193 ELAPEVREWEPRMALTPEGDGLDAYRAITAGASAHLAPGGRLLLEIGAGQGADVAGLCAS 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V    D  G DR++
Sbjct: 253 AGLTEVRILPDLDGRDRLV 271


>gi|221233855|ref|YP_002516291.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter
           crescentus NA1000]
 gi|220963027|gb|ACL94383.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter
           crescentus NA1000]
          Length = 289

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G++  +++ DP   L   Q   L + + R  + E +  I+G + F+ + L
Sbjct: 27  DARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFWKILL 86

Query: 66  TLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ +   PRPETE++VD  L AF      +     +LDLG G+G + LA+L E P  KG
Sbjct: 87  QVNKNVLTPRPETEVIVDEVLKAFP-----EHMAFSMLDLGVGSGTILLAVLAERPAAKG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +G+D S +AL +A+ NA    ++ R   L  DW + +    FD++VSNPPYI + ++D L
Sbjct: 142 LGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVIDTL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +PR++LDGG DGL+ YR +A  + R L   GL +VEIGY+Q   V  +F +  
Sbjct: 202 EPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFRAAG 261

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KD   +DRV+L  +
Sbjct: 262 ATEVRTVKDLSTHDRVVLGVK 282


>gi|16125128|ref|NP_419692.1| hemK family protein [Caulobacter crescentus CB15]
 gi|13422136|gb|AAK22860.1| hemK family protein [Caulobacter crescentus CB15]
          Length = 317

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G++  +++ DP   L   Q   L + + R  + E +  I+G + F+ + L
Sbjct: 55  DARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFWKILL 114

Query: 66  TLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ +   PRPETE++VD  L AF      +     +LDLG G+G + LA+L E P  KG
Sbjct: 115 QVNKNVLTPRPETEVIVDEVLKAFP-----EHMAFSMLDLGVGSGTILLAVLAERPAAKG 169

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +G+D S +AL +A+ NA    ++ R   L  DW + +    FD++VSNPPYI + ++D L
Sbjct: 170 LGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVIDTL 229

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +PR++LDGG DGL+ YR +A  + R L   GL +VEIGY+Q   V  +F +  
Sbjct: 230 EPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFRAAG 289

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KD   +DRV+L  +
Sbjct: 290 ATEVRTVKDLSTHDRVVLGVK 310


>gi|316932076|ref|YP_004107058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris DX-1]
 gi|315599790|gb|ADU42325.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris DX-1]
          Length = 289

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 6/248 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  VTGL    ++V  +  L   +   L     R L  E + RILG R+F+ +  
Sbjct: 29  DARLLVGEVTGLDLTGLLVQAERPLTKDESERLRTFAARRLAGEPVARILGVREFWGLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            LS+DT  PRP+TE +VD+ALA     + +RD    RILD+GTG+GA+ LALL E P   
Sbjct: 89  ELSADTLVPRPDTETVVDAALAV----LGERDAPAPRILDIGTGSGAILLALLSELPGAG 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GV  DIS  AL  A+ NA   G++ R   +  D+ S++ G FD+IVSNPPYI    +  L
Sbjct: 145 GVATDISLGALRTARRNAERLGLARRARFVACDYASALSGPFDLIVSNPPYIPVNEIAEL 204

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ DPR +LDGG DGL  YR I    +  L  DG   VEIG  Q+ DV  + ++  
Sbjct: 205 DREVREHDPRRALDGGADGLDAYRKIIPESAGLLQPDGALVVEIGQGQETDVSALMQAAG 264

Query: 244 LFLVNAFK 251
           L + + F+
Sbjct: 265 LTVSDPFR 272


>gi|254293183|ref|YP_003059206.1| modification methylase, HemK family [Hirschia baltica ATCC 49814]
 gi|254041714|gb|ACT58509.1| modification methylase, HemK family [Hirschia baltica ATCC 49814]
          Length = 288

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 145/257 (56%), Gaps = 7/257 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           LRD+   +    G+S+  +I + ++ +  +     +  I R L+ E I RI G R+F+ +
Sbjct: 28  LRDARRLMELAAGMSTTDLIAEENTQIPLQISAKFSAFIQRRLEGEPISRIAGRREFWGL 87

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++SD  +PRP+TE LV+  L+       K D   +LDLGTG+G + L++L E    +
Sbjct: 88  EFVITSDVLDPRPDTETLVELVLSEW-----KSDYKNVLDLGTGSGCILLSILSEKLSAQ 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
           G+G+D S KAL +A  NA    + +R     S+WF ++  E  FDVIVSNPPYI S  ++
Sbjct: 143 GLGLDQSEKALGVATKNAEKLELKQRARFQNSNWFDALTPEQKFDVIVSNPPYIPSADIE 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L ++V+ +DP  +LDGG DG   YR I      HLNK+GL + E+G+NQ   V  + E+
Sbjct: 203 VLDIDVKKYDPLSALDGGEDGYDDYRHIISKAKVHLNKNGLIAFEVGFNQAEKVCELLEN 262

Query: 242 RKLFLVNAFKDYGGNDR 258
            K   +N  KD  G  R
Sbjct: 263 EKFIHINVRKDLSGVKR 279


>gi|99080783|ref|YP_612937.1| HemK family modification methylase [Ruegeria sp. TM1040]
 gi|99037063|gb|ABF63675.1| modification methylase HemK family [Ruegeria sp. TM1040]
          Length = 278

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/257 (38%), Positives = 144/257 (56%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G RDFY  
Sbjct: 26  RDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSH-LVGERDFYGR 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE L+++ALA    R+        LDLG G+G + + LL E    +
Sbjct: 85  RFKVSGDVLDPRPETETLIEAALAEPFERV--------LDLGVGSGCILVTLLAEQQRAR 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVD+S  A   A +NAV + V  R D  QS+WFS+VEG FD+IVSNPPYI    +D L
Sbjct: 137 GLGVDLSEAACLQASANAVLHRVEARADIRQSNWFSAVEGQFDLIVSNPPYIALEEMDGL 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD +P+++L  G DGLS YR I  G++ HL  +G   VEIG  Q   V ++     
Sbjct: 197 SAEVRDHEPQMALTDGADGLSAYRQICAGLAPHLAANGRVMVEIGPTQGPAVAQMMRETG 256

Query: 244 LFLVNAFKDYGGNDRVL 260
           L  V+   D  G DRV+
Sbjct: 257 LRDVSVLPDLDGRDRVV 273


>gi|39933684|ref|NP_945960.1| modification methylase HemK family [Rhodopseudomonas palustris
           CGA009]
 gi|39647530|emb|CAE26051.1| putative protoporphyrinogen oxidase, hemK protein [Rhodopseudomonas
           palustris CGA009]
          Length = 289

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 139/246 (56%), Gaps = 2/246 (0%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V GL    +++  + +L   +   L +   R L  E + RILG R+F+ +  
Sbjct: 29  DARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSLAARRLGGEPVARILGMREFWGLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+DT  PRP+TE +V++ALA    R       RILD+GTGTGA+ LALL E P   GV
Sbjct: 89  ELSADTLVPRPDTETIVEAALAILAERSSL--APRILDIGTGTGAILLALLHECPDAVGV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL  A+ NA   G+++R   +  D+ S++ G FD+IVSNPPYI    +  L  
Sbjct: 147 ATDISLGALRTARGNAQRLGLADRACFVACDYASALCGPFDLIVSNPPYIPGNEIAALDR 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DPR +LDGG DGL  YR I     R L   G+  VEIG  Q+ DV  + ++  L 
Sbjct: 207 EVRDHDPRRALDGGDDGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQASGLT 266

Query: 246 LVNAFK 251
           + + F+
Sbjct: 267 VSDPFR 272


>gi|89054298|ref|YP_509749.1| HemK family modification methylase [Jannaschia sp. CCS1]
 gi|88863847|gb|ABD54724.1| [protein release factor]-glutamine N5-methyltransferase [Jannaschia
           sp. CCS1]
          Length = 276

 Score =  169 bits (428), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 136/260 (52%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFL-TNAIVRSLKHESIHRILGWRDF 60
           +A R++   +C    +SS Q+    D        F L   A       + + +I+G  +F
Sbjct: 20  EAEREARLLMCHALKISSAQLYARLDETWPTGPPFQLFVEACEARKSRQPLSQIIGEVEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  R  ++SD   PRP+TE LVD AL+    R+        LDLGTG+G V   LL E P
Sbjct: 80  YGRRFFVNSDVLTPRPDTETLVDQALSGGFERV--------LDLGTGSGCVLATLLAERP 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              GVG D+S  ALE+A  N    GV +R   + SDWF +V+G FD+I+SNPPYI +  +
Sbjct: 132 GSNGVGTDLSQPALEVAARNVARQGVQDRAVLVHSDWFEAVQGQFDLILSNPPYIAAAEM 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD++P ++L  G DGL+ YR I      HL   G   VEIG +Q   V  +F 
Sbjct: 192 RGLAPEVRDWEPHVALTPGGDGLTAYRIITAAGPMHLRAGGRLMVEIGLDQGAAVAELFR 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V   +D  G+DRV+
Sbjct: 252 AAGFGDVRITQDLSGHDRVV 271


>gi|85713813|ref|ZP_01044803.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
 gi|85699717|gb|EAQ37584.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
          Length = 298

 Score =  169 bits (427), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/222 (43%), Positives = 130/222 (58%), Gaps = 1/222 (0%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E + RILG ++F+ + L LSSDT  PR +TE +V++AL         +  +RI D
Sbjct: 70  RRLAGEPLARILGTKEFWGLPLKLSSDTLVPRADTETVVETALDILRAEGRMQAALRIAD 129

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LALL E P   GVG D+S  AL+ AK+NA   G++ R   L SD+ + + G
Sbjct: 130 LGTGSGAILLALLTELPAATGVGTDLSAAALDTAKTNAQDVGLATRAQFLVSDYGNGLSG 189

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI S  +  L  EVRD DP ++LDGG DGL  YR IA      L   GL 
Sbjct: 190 PFDLIVSNPPYIRSADIATLAPEVRDHDPPLALDGGRDGLDAYRRIAPQALSLLADGGLL 249

Query: 224 SVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLFCR 264
            +EIG  Q   V R+  +  L ++ +A  D  G  R ++  R
Sbjct: 250 VLEIGQGQDSAVSRLMAAAGLTVMGSARTDLAGIGRAVVARR 291


>gi|167644952|ref|YP_001682615.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter sp. K31]
 gi|167347382|gb|ABZ70117.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter sp. K31]
          Length = 285

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 146/261 (55%), Gaps = 7/261 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   D+   L     ++   +I DP  VL + Q   L + + R    E +  I+G + F+
Sbjct: 23  QPAIDARLLLEVAADVTRTDIITDPYRVLTETQMATLNDFLERRAAREPVSHIIGRKGFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + L ++ +   PRPETE++VD  L AF      ++    +LDLG G+G + LA+L E P
Sbjct: 83  KILLQVNKNVLTPRPETEVIVDEVLKAFP-----EQMSFNMLDLGVGSGTILLAVLAERP 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
             KG+G+D+S  AL +A+ NA +  +S R   L+ DW + + +  FD++VSNPPYI + +
Sbjct: 138 AAKGLGIDVSEDALAVARENAASLDLSGRVALLRGDWTNGLGDNGFDLVVSNPPYIATHV 197

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EVRD +PR++LDGG DGL  YR +A  + R L    + +VEIGY+Q   V  +F
Sbjct: 198 IETLEPEVRDHEPRLALDGGPDGLDAYRLLAGEILRVLKPGAMFAVEIGYDQSAAVEALF 257

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  V   KD   NDRV+
Sbjct: 258 REAGAQNVRTIKDLSVNDRVV 278


>gi|75674574|ref|YP_316995.1| modification methylase HemK [Nitrobacter winogradskyi Nb-255]
 gi|74419444|gb|ABA03643.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 298

 Score =  169 bits (427), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/222 (41%), Positives = 131/222 (59%), Gaps = 1/222 (0%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I RILG ++F+ + L LS+DT  PR +TE +V++AL         ++ +RI D
Sbjct: 70  RRLAGEPIARILGTKEFWGLPLKLSADTLVPRADTETVVEAALGVLRAEGRTQEPLRIAD 129

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LALL E P   GVG D+S  AL+ A++NA   G++ R   L SD+   + G
Sbjct: 130 LGTGSGAILLALLTELPKATGVGTDLSAAALDTARANAQGVGLAARSRFLVSDYADGLSG 189

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI S  +  L  EVRD DP ++LDGG+DGL  YR IA   +  L   GL 
Sbjct: 190 QFDLIVSNPPYIRSADIPTLAPEVRDHDPHLALDGGLDGLDAYRRIAPRAAALLADGGLL 249

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVLLFCR 264
            +EIG  Q   V  +  +  L ++ + + D  G  R ++  +
Sbjct: 250 VLEIGQGQGGAVTPLVSAAGLTVMGSVRADLAGIGRAVVAGK 291


>gi|328542098|ref|YP_004302207.1| Protein-(glutamine-N5) methyltransferase, release factor-specific
           [polymorphum gilvum SL003B-26A1]
 gi|326411848|gb|ADZ68911.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Polymorphum gilvum SL003B-26A1]
          Length = 281

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/259 (36%), Positives = 134/259 (51%), Gaps = 4/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        GLS   +++  D+ +D  +       +        + RILG R+F+ + L
Sbjct: 25  DARMLTADAAGLSPGDIVLREDAEVDPAREALARAHVAARCGGTPVGRILGRREFWGLEL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +LS  T EPRP+TE LV++ LA    R        + D+GTG+GA+ +A+L   P    V
Sbjct: 85  SLSPATLEPRPDTETLVEAVLA----RAGGEAAPVLADIGTGSGAIAIAVLTALPEACAV 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS +AL  A++NA+ +GV  R   +Q  + + +   FD IVSNPPYI S  VD L  
Sbjct: 141 ATDISLEALATARANALRHGVDGRMLFVQGSYGAPLGAGFDWIVSNPPYIASAEVDRLAR 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DPR +LDGG DGL  YR I       L   G  +VEIG +Q  +V  +      F
Sbjct: 201 EVREHDPRRALDGGADGLDAYRAIVPAARHSLRPGGRLAVEIGADQGAEVAELMAENGFF 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            V   +D  G  RV+  CR
Sbjct: 261 DVEIIRDLAGRPRVVSGCR 279


>gi|325578169|ref|ZP_08148304.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159905|gb|EGC72034.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
           33392]
          Length = 292

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 153/265 (57%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   ++ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E SP  +
Sbjct: 86  NVSEGTLIPRPDTEILVEKALHIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145

Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+  + +++A+SNA  N +  +F  LQS WF +VEG FD+IVSNPPYI+
Sbjct: 146 KKHIQLDVIGVDLMPEVVKLAQSNAEKNQLKVQF--LQSRWFENVEGQFDIIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+PR +L  G +GL+  R + +    HL  +G   +E G+ Q  +V 
Sbjct: 204 EADEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLKDNGYLLLEHGWKQGEEVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF       V   +DYG N+RV L
Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTL 287


>gi|119383646|ref|YP_914702.1| HemK family modification methylase [Paracoccus denitrificans
           PD1222]
 gi|119373413|gb|ABL69006.1| [protein release factor]-glutamine N5-methyltransferase [Paracoccus
           denitrificans PD1222]
          Length = 275

 Score =  168 bits (425), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 133/260 (51%), Gaps = 35/260 (13%)

Query: 26  PDSVLDDRQ---------RFFLTNAIVRSLKHESIHR----------------ILGWRDF 60
           P +  D RQ         R  LT A+   L  E++ R                ILG R F
Sbjct: 20  PGAAEDARQLLAHALELPRHHLTAALAMPLPPEALRRFDASLAARAARQPVSQILGRRAF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     ++ DT +PRPETE LV++AL              +LDLGTGTGA+ ++LL E P
Sbjct: 80  WKHEFRVTRDTLDPRPETETLVEAAL--------TEPFASVLDLGTGTGAILISLLAERP 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +G+G DIS  ALE+A+ NA   GV   F  L+S+WF+SV G FD+IVSNPPYI    +
Sbjct: 132 AARGLGTDISPAALEVARENATRIGVCADF--LESNWFASVAGQFDLIVSNPPYIALEEM 189

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR+++PR +L    DGLS YR IA G   HL   G   VEIG  Q   V  +  
Sbjct: 190 AGLSPEVREWEPRAALTDEADGLSAYRAIAAGAPAHLLPGGRLMVEIGPTQGAAVAALMR 249

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +  L       D  G DRV+
Sbjct: 250 AVGLAEPRILPDLDGRDRVV 269


>gi|301156076|emb|CBW15547.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 292

 Score =  167 bits (424), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 105/265 (39%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   ++ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLSL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E SP  +
Sbjct: 86  NVSEGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145

Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+  + +E+A+SNA  N +  +F  LQS WF  VE  FD+IVSNPPYI+
Sbjct: 146 KKNIQLDVIGVDLMPEVVELAQSNAEKNQLKVQF--LQSRWFEHVEVQFDIIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+PR +L  G +GL+  R + +    HLN  G   +E G+ Q  +V 
Sbjct: 204 ETDEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLNDGGYLLLEHGWKQGEEVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF       V   +DYG N+RV L
Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTL 287


>gi|304394128|ref|ZP_07376051.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ahrensia sp. R2A130]
 gi|303293568|gb|EFL87945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ahrensia sp. R2A130]
          Length = 283

 Score =  167 bits (424), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + + +  VTG  +  V+V  D   +        N + +      + R +G R+F+ +   
Sbjct: 30  ARAIMAHVTGDDAGMVMVREDVAFNAADAAVFQNLVQKVASGTPLFRAIGVREFHGLDFA 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           LS DT EPR +TE L+++ L+ S P        R  DLGTG+G V ++LL E      V 
Sbjct: 90  LSKDTLEPRDDTEALIEAVLSQSPPAKS-----RFSDLGTGSGIVAISLLHELSEATAVA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL+ A +NA  NGV ER  T Q  W   +EG FD +VSNPPYI S IVD L   
Sbjct: 145 TDISAGALQTATANAARNGVGERLSTAQGSWCEPLEGAFDFMVSNPPYIASDIVDGLDQS 204

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V D DPR +LDGG  GL  YR I       L   G  ++EIGY+Q   V  + +      
Sbjct: 205 VLDHDPRRALDGGETGLEAYREILSQAGSLLRPGGFLALEIGYDQAEAVTALAQQTGWRR 264

Query: 247 VNAFKDYGGNDRVLLFC 263
           +  + D  G+DR L+F 
Sbjct: 265 LALYHDLQGHDRALVFA 281


>gi|85705323|ref|ZP_01036422.1| Putative methylase [Roseovarius sp. 217]
 gi|85670196|gb|EAQ25058.1| Putative methylase [Roseovarius sp. 217]
          Length = 285

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/219 (40%), Positives = 122/219 (55%), Gaps = 7/219 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R +    + +ILG R F+     +++D  +PRPETE L+  ALA   P       + +
Sbjct: 61  IARRMARAPVAKILGRRVFWGREFEVTADVLDPRPETECLIAEALAGPKP-------LTL 113

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + + LL E P  +GV +D+S +AL++A  NA  +GV +R     SDWF+ +
Sbjct: 114 LDLGTGSGILAVTLLAEWPGVRGVALDLSAEALDVAARNAARHGVRDRLSLCHSDWFAQI 173

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G FD+IVSNPPYI    +  L  EVRD DPR++L    DGL+ YR IA     HLN  G
Sbjct: 174 TGAFDLIVSNPPYIGRDEMVGLMPEVRDHDPRMALTDEGDGLTAYRVIAGAAGAHLNPGG 233

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              VEIG+ Q   V  +  +     V    D  G DRV+
Sbjct: 234 RLMVEIGWTQGAAVADLLRAAGFEAVAVLPDLEGRDRVV 272


>gi|323142097|ref|ZP_08076945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413484|gb|EFY04355.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Phascolarctobacterium sp. YIT 12067]
          Length = 307

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 142/261 (54%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V      ++  + D  L + +R  + + + R  KHE +  I+G R F     
Sbjct: 30  DAEVLLCAVLKCERIKLYTEFDKPLSEEERDKMRSYVERRAKHEPLAYIIGERAFMRNNF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRPETELLV+S L  + P +     V+ LD+GTG+GA+ ++LL   P   GV
Sbjct: 90  KVTPATLVPRPETELLVES-LVKAAPMLRADGAVKALDIGTGSGAIIVSLLDYLPAAVGV 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
           GVDIS +AL +AK NA   GV +R    QSD FS+  VE  FD+IVSNPPYI +  +  L
Sbjct: 149 GVDISNEALAVAKENAAAIGVDKRVAFRQSDLFSNVPVEKKFDIIVSNPPYIPAADIATL 208

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V+  +PR +LDGG DGL  YR I    + HL +DGL + EIG +Q   V ++     
Sbjct: 209 AQDVQQ-EPRTALDGGADGLDFYRRICAEAAEHLAEDGLLAFEIGIDQSEAVQKLCLEHG 267

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                   DY G  R++   +
Sbjct: 268 FAKTAVRMDYAGIPRMIFALK 288


>gi|84686943|ref|ZP_01014827.1| Putative methylase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665140|gb|EAQ11620.1| Putative methylase [Rhodobacterales bacterium HTCC2654]
          Length = 279

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 137/258 (53%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L +V  +   ++ ++ D  +         + + R +  E + +I+G R F+ 
Sbjct: 22  AARDAQLLLAQVLRIEVMRLSLERDMQVSPADMLAYEDMLDRRIAREPVSKIIGRRQFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T++ D  +PRPETE L+  AL  + P        RILDLGTG+G + + LL E    
Sbjct: 82  RDFTVTRDVLDPRPETETLIAEALTGAPPS-------RILDLGTGSGILAITLLAEWREA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V  D+S  AL++A  NA  NGV  R   L SDWF+ V+G FD+IVSNPPYI +  +  
Sbjct: 135 FAVATDLSDPALKVAARNATLNGVDNRLTFLASDWFARVQGRFDLIVSNPPYIAADEMPS 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  FDP+++L  G DGL  YR IA G   H++  G   VEIG+ Q   V  IF + 
Sbjct: 195 LAPEVLGFDPQMALTPGGDGLDPYRKIAAGALAHMDPGGRLLVEIGFRQGRAVSDIFAAA 254

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L  V    D  G DRV+
Sbjct: 255 GLDDVRIHPDMDGRDRVI 272


>gi|40062726|gb|AAR37631.1| modification methylase, HemK family [uncultured marine bacterium
           438]
          Length = 280

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 144/259 (55%), Gaps = 4/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L          VI++P  VL+  Q     + I R  K E I  ++  ++F+    
Sbjct: 25  DSEILLSNSIKRDKKHVILNPKEVLNSEQLGKFKSLIERRKKGEPIAYLINKKEFWKDEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP++EL+++  L        K D ++ILD+GTG+G + L++LKE   F G 
Sbjct: 85  FVNKDVLIPRPDSELIIEQVLKI----YSKDDQLQILDIGTGSGCILLSILKERSNFYGT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+DIS K+++++K NA    ++ R     S   +   G +D+IVSNPPYIE + +  L  
Sbjct: 141 GIDISKKSIDVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIIVSNPPYIEQLCLKYLEK 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V +F+P+++L GG DG S  R + +  S  + K+G   +EIG+NQK  V++I +    +
Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKTSNLIKKNGKFILEIGFNQKNKVIKILKEEGFY 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +  A KDYG NDR ++  +
Sbjct: 261 VNKAIKDYGNNDRCIISTK 279


>gi|254474677|ref|ZP_05088063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruegeria sp. R11]
 gi|214028920|gb|EEB69755.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruegeria sp. R11]
          Length = 285

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 140/257 (54%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  D    +     +R+++    H ++G R+FY  
Sbjct: 28  RDARVLLAHAARIEASRVTLIAPEDLDPDVAERYEQLISLRAIRVPVSH-LVGEREFYGR 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +SSD  +PRPETE L+++ALA            R+LDLG G+G + + LL E P   
Sbjct: 87  RFKVSSDVLDPRPETECLIEAALAEPF--------ARVLDLGLGSGCILVTLLAEQPKAT 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVD+S  A   A +NAV + V  R D  QSDWF+ VEG FD+IVSNPPYI    ++ L
Sbjct: 139 GLGVDLSEAACLQASANAVLHRVEPRADVRQSDWFAQVEGQFDLIVSNPPYIALDEMEGL 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P ++L  G DGLS YR I+  V+ +L   G   +EIG  Q   V  +  +  
Sbjct: 199 SAEVRGHEPEMALTDGADGLSAYRAISQQVAEYLAPGGRVLLEIGPTQGAQVAEMLRTAG 258

Query: 244 LFLVNAFKDYGGNDRVL 260
           L  V    D  G DRV+
Sbjct: 259 LVDVRVLPDLDGRDRVV 275


>gi|90422035|ref|YP_530405.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisB18]
 gi|90104049|gb|ABD86086.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB18]
          Length = 291

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/239 (40%), Positives = 133/239 (55%), Gaps = 3/239 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V GL    ++V    +L   Q   L   + R L  E + RI+G ++F+ + L
Sbjct: 32  DARLLIGAVLGLDLTGLMVGAARLLTPEQASQLDALVTRRLAGEPVARIVGIKEFWGLPL 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L  DT  PRP+TE +V++AL     R   +   RI DLGTG+GA+ LALL E P   GV
Sbjct: 92  ALCGDTLVPRPDTETIVEAALQLFAGRPAPQ---RIADLGTGSGAILLALLSEWPQACGV 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL  A++NA   G+ +R   +  D+ S++ G FD+IVSNPPYI S  +  L  
Sbjct: 149 ASDISVAALHTARANAARLGLGDRAAFVACDYASALRGPFDLIVSNPPYIRSADIAALDR 208

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           EVRD DPR +LDGG DGL+ YRTI    +  L+  G   VEIG  Q  +V  +  +  L
Sbjct: 209 EVRDHDPRRALDGGADGLAAYRTITTQAAGLLSPGGALIVEIGQGQGDEVSALMRAAGL 267


>gi|288956983|ref|YP_003447324.1| HemK protein [Azospirillum sp. B510]
 gi|288909291|dbj|BAI70780.1| HemK protein [Azospirillum sp. B510]
          Length = 282

 Score =  166 bits (419), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 142/253 (56%), Gaps = 3/253 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L     L+    I   +  + D+    +   + R    E + RILG R+F+ + L
Sbjct: 25  DARYLLEHALKLTRTDFITKSEQPVPDQDAAHVLTLVERRAAREPVGRILGHREFWTIDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L+ DT EPRP+TE +V++ALA ++P  +++  +R++D GTGTG + LALL E P   GV
Sbjct: 85  VLNPDTLEPRPDTETVVEAALA-AIP--DRKAPLRLIDFGTGTGCILLALLSELPNATGV 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD+S  A++ A  NA  NG+++R      DW   +   FD++VSNPPYI S  +  L  
Sbjct: 142 GVDLSPLAVQAAAGNAERNGLADRARFQIGDWAKDIRDRFDIVVSNPPYIPSADIAALEP 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DP  +LDGG DGL  YR +A  + R L   GL + E+G+ Q  DV  + E++ + 
Sbjct: 202 EVRDHDPLRALDGGPDGLEPYRILAAELPRLLLPGGLVAFEVGWGQAEDVAALVEAQGMG 261

Query: 246 LVNAFKDYGGNDR 258
                 D GG  R
Sbjct: 262 ETAILCDLGGVKR 274


>gi|114569198|ref|YP_755878.1| HemK family modification methylase [Maricaulis maris MCS10]
 gi|114339660|gb|ABI64940.1| [protein release factor]-glutamine N5-methyltransferase [Maricaulis
           maris MCS10]
          Length = 319

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 134/222 (60%), Gaps = 6/222 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L    + ++LG + F+ + L +SSD   PR +TE LV++ LA +          R++D
Sbjct: 94  RRLARVPLSQVLGSQPFWTLDLAVSSDVLTPRADTEALVEAVLAEA-----GEASARLVD 148

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162
           LGTG+GA+ LALL E P + G+GVD+S  AL IA +NA   G++ R + +Q  W + + +
Sbjct: 149 LGTGSGAILLALLSERPGWSGLGVDLSAPALAIATANADRCGLANRAEFMQGRWGAGLAD 208

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++VSNPPYI S I+  L  EVRD +P ++LDGG+DGL  YR I   + R L  +GL
Sbjct: 209 GSVDILVSNPPYIVSDILAGLEPEVRDHEPALALDGGVDGLDAYREIIADLPRLLVSNGL 268

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++EIG++Q V V  +     L  +    D  GNDRV+L  R
Sbjct: 269 FALEIGHDQGVTVSALAREAGLVDIRVLPDLAGNDRVVLGRR 310


>gi|149204049|ref|ZP_01881017.1| Putative methylase [Roseovarius sp. TM1035]
 gi|149142491|gb|EDM30536.1| Putative methylase [Roseovarius sp. TM1035]
          Length = 285

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/258 (37%), Positives = 135/258 (52%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+ + L    GL+  ++ +     LD          I R    E + +ILG R F+ 
Sbjct: 22  AAGDARALLAGAVGLARDRLTLHLGEDLDAAALARFEAMIARRAAREPVAKILGRRVFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++D  +PRPETE L+  ALA   P       + +LDLGTG+G + + LL E P  
Sbjct: 82  REFEVTADVLDPRPETECLIFEALAGPKP-------LTLLDLGTGSGILAVTLLAEWPDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  D+S  AL++A  NA  +GV+ R    +SDWF+ V G+FD+IVSNPPYI +  +  
Sbjct: 135 GGVATDVSDAALDVATRNAARHGVAGRLTLSRSDWFARVAGVFDLIVSNPPYIAAAEMAG 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ DPR +L    DGL+ YR IA G   HL+  G   VEIG+ Q   V  +  + 
Sbjct: 195 LMPEVREHDPRGALTDEADGLTAYRAIAAGAGAHLSPGGRLMVEIGWKQGPAVADLLCAE 254

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V    D  G DRV+
Sbjct: 255 GFDAVTIRPDLEGRDRVV 272


>gi|259418842|ref|ZP_05742759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter sp. TrichCH4B]
 gi|259345064|gb|EEW56918.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter sp. TrichCH4B]
          Length = 278

 Score =  164 bits (415), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 10/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G RDFY  
Sbjct: 26  RDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSH-LIGERDFYGR 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S+D  +PRPETE L+++AL+    R+        LDLG G+G + + LL E     
Sbjct: 85  RFKVSADVLDPRPETETLIEAALSEPFERV--------LDLGVGSGCILVTLLAEQQGAL 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVD+S  A   A +NAV + V  R D  QSDWFS+V+G FD+IVSNPPYI    +D L
Sbjct: 137 GLGVDLSEAACLQACANAVLHRVEARADIRQSDWFSAVKGQFDLIVSNPPYIALNEMDDL 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ +P+++L  G DGLS YR I  G+  HL + G   VEIG  Q   V  +  +  
Sbjct: 197 SEEVREHEPQMALTDGADGLSAYRLICAGLGCHLAQGGRVLVEIGPTQGAAVAEMMRAAG 256

Query: 244 LFLVNAFKDYGGNDRVLL 261
           L  V    D  G DRV+L
Sbjct: 257 LVEVTVLPDLDGRDRVVL 274


>gi|294678209|ref|YP_003578824.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003]
 gi|294477029|gb|ADE86417.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003]
          Length = 252

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 127/234 (54%), Gaps = 9/234 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +DR + FL     R  + + + +I G R F+     ++  T +PRPETELLV+ AL  + 
Sbjct: 27  EDRHKQFLKCLAAREAR-QPVAQITGHRAFWKHEFRVTRATLDPRPETELLVEVALETAF 85

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                    R+LDLGTGTG + L+LL E P  +GV  DIS  AL +A+ NA    + ER 
Sbjct: 86  --------ERVLDLGTGTGCILLSLLAERPAARGVATDISEAALAVAQENAERLSLYERA 137

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             +Q DWF  VEG FD+IVSNPPYI    +  L  +VRD++P  +L  G DGL  YR IA
Sbjct: 138 HFVQGDWFHGVEGRFDLIVSNPPYITEAEMAELAPDVRDWEPHTALTPGGDGLGAYRAIA 197

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G    L   G  ++EIG  Q   V  +  ++    V   +D G  DRV+L  R
Sbjct: 198 FGAFARLKPGGRIALEIGPTQAAAVSAMLTAQGFADVEVRQDLGHRDRVVLAHR 251


>gi|300025030|ref|YP_003757641.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526851|gb|ADJ25320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 295

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 2/258 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  + G+    ++  P+  L D+    + +A+ R L HE + RILG R+FY 
Sbjct: 34  APRDARLLLQGLLGIDGTALLTRPEQPLGDKA-ALIGDAVRRRLAHEPVTRILGVREFYG 92

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D  +PRP+TE +V+ AL            ++I D+GTG+G +   LL E P  
Sbjct: 93  REFIVTPDVLDPRPDTETVVELALEIVRANGLTSAPLQIADIGTGSGILIATLLLELPNA 152

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GV  DIS  AL +A+ NA   G+++R   + +       G FD+IVSNPPYI    +  
Sbjct: 153 RGVATDISTAALAVAERNAKRLGLADRTSFVATHSLDGCAGPFDLIVSNPPYIREADIPG 212

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD+DP+++LDGG DGL  YR IA  V+R+  +     +E+G  Q  DV  IF + 
Sbjct: 213 LEPEVRDYDPQLALDGGADGLDVYREIAK-VARNPLRPMRLVLEVGAGQASDVTDIFRAA 271

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD GG+DR +
Sbjct: 272 GWRPLGRQKDLGGHDRAV 289


>gi|254485503|ref|ZP_05098708.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseobacter sp. GAI101]
 gi|214042372|gb|EEB83010.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseobacter sp. GAI101]
          Length = 271

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 141/257 (54%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    F T   +R+++    H ++G R FY  
Sbjct: 18  RDARILLAHAASVDASRVTLIAPEEIAPEIAERFETLIALRAVRVPVSH-LVGQRAFYGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S D  +PRPETE L++ AL+      E  D V  +DLGTG+G + + LL E P  +
Sbjct: 77  DFKISRDVLDPRPETETLIELALS------EAFDTV--MDLGTGSGCILVTLLAERPEAR 128

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+G+D+S  A   A +NAV +GV+ R D  QSDWF++ EG FD+IV+NPPY+    +  +
Sbjct: 129 GLGLDLSEAACLQASANAVLHGVAARADIRQSDWFAAAEGRFDLIVANPPYLAKSEMAGV 188

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E+R  +P ++L  G+DGLS YR IA     +L   G    EIG+ Q  DV +IF    
Sbjct: 189 APELRLHEPEMALTDGLDGLSAYRVIASQAQGYLTATGRVLAEIGWQQGPDVAQIFRDAG 248

Query: 244 LFLVNAFKDYGGNDRVL 260
              V    D  G DRVL
Sbjct: 249 WGRVRILPDLDGRDRVL 265


>gi|126739407|ref|ZP_01755100.1| modification methylase, HemK family protein [Roseobacter sp.
           SK209-2-6]
 gi|126719507|gb|EBA16216.1| modification methylase, HemK family protein [Roseobacter sp.
           SK209-2-6]
          Length = 287

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 139/258 (53%), Gaps = 10/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G R+FY  
Sbjct: 34  RDARILLAHAARIEASRVTLIAPEELEPEVAERYEQLISLRAIRVPVSH-LIGEREFYGR 92

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE L+++ALA        +   R+LDLG G+G + + LL E P   
Sbjct: 93  RFKVSGDVLDPRPETECLIEAALA--------QPFERVLDLGLGSGCILVTLLAEQPKAS 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G GVD+S  A   A +NAV + V ER D  QSDWFS+V G FD++VSNPPYI    +  L
Sbjct: 145 GFGVDLSEAACLQASANAVLHRVEERIDIQQSDWFSNVTGQFDLVVSNPPYIALPEMQDL 204

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P ++L  G DGL  YR IA  V  HL   G   +EIG +Q  DV  +     
Sbjct: 205 SPEVRSHEPEMALTDGGDGLGAYRQIAASVREHLLPGGRLLLEIGPSQGRDVTALLAEAG 264

Query: 244 LFLVNAFKDYGGNDRVLL 261
           L  +    D  G DRV++
Sbjct: 265 LLEIRVLPDLDGRDRVVV 282


>gi|90420192|ref|ZP_01228100.1| putative hemK modification methylase involved in heme biosynthesis
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90335526|gb|EAS49276.1| putative hemK modification methylase involved in heme biosynthesis
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 298

 Score =  162 bits (410), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 125/221 (56%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +HRI+G R FY     LS +T EPRP+TE+LV+ A       + ++     
Sbjct: 68  LARRAAGEPVHRIIGRRAFYEHDFVLSPETLEPRPDTEVLVEEAREAMAAIVARKGRCVF 127

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTGTGA+ ++LL      + V +DIS  AL  A+ NA+  GV++R   +++++  ++
Sbjct: 128 ADVGTGTGAIAVSLLALFAEAEAVALDISDGALRTARRNAIVAGVADRMLAVRANYLDAI 187

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  +++VSNPPYI    +  L  EVRD DP ++LDGG DGL  YR +A G  R +   G
Sbjct: 188 GGPLELVVSNPPYIPHDDIAALSREVRDHDPLLALDGGADGLDAYRALATGARRVVRPQG 247

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  VEIG  Q+ DV  IF +    L    +D GG  RVL  
Sbjct: 248 LVIVEIGVGQERDVAAIFAAEGFILDAETRDLGGVIRVLTL 288


>gi|86138686|ref|ZP_01057259.1| modification methylase, HemK family protein [Roseobacter sp.
           MED193]
 gi|85824746|gb|EAQ44948.1| modification methylase, HemK family protein [Roseobacter sp.
           MED193]
          Length = 284

 Score =  162 bits (410), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 141/261 (54%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H +LG R+FY  
Sbjct: 31  RDARILLAHAARIEASRVTLIAPEDLEPEVAERYEQLIALRAIRVPVSH-LLGEREFYGR 89

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE L+++ALA    R+        LDLG G+G + + LL ESP   
Sbjct: 90  RFKVSKDVLDPRPETETLIEAALAEPFERV--------LDLGLGSGCILVTLLAESPQAT 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVD+S  A   A +NA+ + V  R D  QSDWFS+V G FD+IVSNPPYI    +  L
Sbjct: 142 GLGVDLSEAACLQASANAILHRVESRIDIQQSDWFSNVTGRFDLIVSNPPYIALDEMADL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P ++L  G DGL+ YR +A GV  HL   G   +EIG  Q   V  + +   
Sbjct: 202 SPEVRQHEPDMALTDGGDGLAAYRALAAGVRAHLRSGGRLCLEIGPTQGQAVAAMMQEAG 261

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
           L  +    D  G DRV +F R
Sbjct: 262 LTNIAVLPDLDGRDRV-VFAR 281


>gi|229844231|ref|ZP_04464372.1| HemK [Haemophilus influenzae 6P18H1]
 gi|229813225|gb|EEP48913.1| HemK [Haemophilus influenzae 6P18H1]
          Length = 292

 Score =  162 bits (409), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 153/265 (57%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGQFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|83953607|ref|ZP_00962328.1| modification methylase, HemK family protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841552|gb|EAP80721.1| modification methylase, HemK family protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 280

 Score =  161 bits (408), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 139/257 (54%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  D    +     +R+++    H ++G R FY  
Sbjct: 27  RDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSH-LVGQRAFYGR 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S D  +PRPETE L++  LA S P        R+LDLGTG+G + + LL E    +
Sbjct: 86  DFKVSRDVLDPRPETESLIE--LALSEP------FERVLDLGTGSGCILVTLLAEQQDAR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVG+D+S  A   A +NAV +GV  R +  QSDWFS+ EG FD+IVSNPPY+    +  +
Sbjct: 138 GVGLDLSEAACLQASANAVLHGVQARAEITQSDWFSAAEGRFDLIVSNPPYLAQSEMADV 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E+R  +P ++L  G DGLS YR IA     +L   G    EIG+ Q  DV  IFE+  
Sbjct: 198 SPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLAPTGRVLAEIGWQQGADVKAIFEAAG 257

Query: 244 LFLVNAFKDYGGNDRVL 260
              V    D GG DRVL
Sbjct: 258 WGRVRILPDLGGRDRVL 274


>gi|91762345|ref|ZP_01264310.1| HemK [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718147|gb|EAS84797.1| HemK [Candidatus Pelagibacter ubique HTCC1002]
          Length = 280

 Score =  161 bits (408), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 143/259 (55%), Gaps = 4/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L          +I++P  VL+  Q     + I R  K E I  ++  ++F+    
Sbjct: 25  DSEILLSNSIKRDKKHIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFWKDEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP++EL+++  L        K D +++LD+GTG+G + L++LKE   F G 
Sbjct: 85  FVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSNFYGT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+DIS K++ ++K NA    ++ R     S   +   G +D++VSNPPYIE + +  L  
Sbjct: 141 GIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLKYLEK 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V +F+P+++L GG DG S  R + +  S  + K+G   +EIG+NQK  V++I +    +
Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKASILIKKNGKFILEIGFNQKNKVIKILKEEGFY 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +  A KDYG NDR ++  +
Sbjct: 261 VNKAIKDYGNNDRCIISTK 279


>gi|83942387|ref|ZP_00954848.1| modification methylase, HemK family protein [Sulfitobacter sp.
           EE-36]
 gi|83846480|gb|EAP84356.1| modification methylase, HemK family protein [Sulfitobacter sp.
           EE-36]
          Length = 280

 Score =  161 bits (407), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 140/257 (54%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  D    +     +R+++    H ++G R FY  
Sbjct: 27  RDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSH-LVGQRAFYGR 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S D  +PRPETE L++ AL+    R E     R+LDLGTG+G + + LL E    +
Sbjct: 86  DFKVSRDVLDPRPETESLIELALS---ERFE-----RVLDLGTGSGCILVTLLAEQQDAR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVG+D+S  A   A +NAV +GV  R +  QSDWFS+ EG FD+IVSNPPY+    +  +
Sbjct: 138 GVGLDLSEAACLQASANAVLHGVQARAEIKQSDWFSAAEGRFDLIVSNPPYLAQSEMADV 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E+R  +P ++L  G DGLS YR IA     +L   G    EIG+ Q  DV  IFE+  
Sbjct: 198 SPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLTPTGRVLAEIGWQQGADVKAIFEAAG 257

Query: 244 LFLVNAFKDYGGNDRVL 260
              V    D GG DRVL
Sbjct: 258 WGRVRILPDLGGRDRVL 274


>gi|148258773|ref|YP_001243358.1| putative methyltransferase hemK [Bradyrhizobium sp. BTAi1]
 gi|146410946|gb|ABQ39452.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [Bradyrhizobium sp. BTAi1]
          Length = 295

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 5/239 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           H+    +TGL  H         L      +L   + R L  E + RILG ++F+ + L L
Sbjct: 39  HALQLDLTGLVMHG-----QRALSAADITWLEALMQRRLAGEPVARILGTKEFWGLELHL 93

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S+DT  PRP+TE +V+ AL       + +  +RI DLGTG+GA+ LALL E P   GVG 
Sbjct: 94  SADTLVPRPDTETVVELALEHLAAGGDLKRPLRIADLGTGSGAILLALLSELPAAYGVGT 153

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL+ A+ NA   G+ +R   +   + S++   FD+IVSNPPYI S  +D L ++V
Sbjct: 154 DISHAALQTARDNARILGLGDRAGFIAGSYASALSPPFDLIVSNPPYIPSREIDDLAIDV 213

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           R +DP  +LDGG DGL  YR +    ++ L   G   VE+G  Q  DV  +  + +L +
Sbjct: 214 RAYDPLRALDGGADGLDAYRALIPQAAQLLQPGGTLVVEVGQGQSEDVAELMRAARLAI 272


>gi|71083225|ref|YP_265944.1| hypothetical protein SAR11_0519 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062338|gb|AAZ21341.1| HemK [Candidatus Pelagibacter ubique HTCC1062]
          Length = 280

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 143/259 (55%), Gaps = 4/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L          +I++P  VL+  Q     + I R  K E I  ++  ++F+    
Sbjct: 25  DSEILLSNSIKRDKKYIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFWKDEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP++EL+++  L        K D +++LD+GTG+G + L++LKE   F G 
Sbjct: 85  FVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSNFYGT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+DIS K++ ++K NA    ++ R     S   +   G +D++VSNPPYIE + +  L  
Sbjct: 141 GIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLKYLEK 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V +F+P+++L GG DG S  R + +  +  + K+G   +EIG+NQK  V++I +    +
Sbjct: 201 DVVNFEPKLALSGGFDGFSKIRKVINKTNNLIKKNGKFILEIGFNQKNKVIKILKEEGFY 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +  A KDYG NDR ++  +
Sbjct: 261 VNKAIKDYGNNDRCVISTK 279


>gi|83951818|ref|ZP_00960550.1| modification methylase, HemK family protein [Roseovarius
           nubinhibens ISM]
 gi|83836824|gb|EAP76121.1| modification methylase, HemK family protein [Roseovarius
           nubinhibens ISM]
          Length = 275

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 121/220 (55%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  ILG R FY     ++ D  +PRPETE LV +AL        +    R+
Sbjct: 61  LARRAAREPMSHILGQRQFYGRAFKVTGDVLDPRPETECLVAAAL--------EEGFERV 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + L+LL E    +G+G D+S  AL++A+ NA   G++ R    ++DWF  V
Sbjct: 113 LDLGTGSGCILLSLLAEREGAQGLGADVSAAALDVARENAARLGLASRAAFQEADWFKGV 172

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G +D+IVSNPPYI    +  L  E+   +PR +L    DGLS YR IA GV  HL   G
Sbjct: 173 AGQYDLIVSNPPYIGIAEMPELAPEL-AHEPRAALTDEGDGLSAYRAIAAGVLAHLVPGG 231

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              VEIG  Q  DV RIF    L  V   +D  G DRV++
Sbjct: 232 RILVEIGRTQGADVARIFAEAGLQAVELRQDLDGRDRVVM 271


>gi|297180645|gb|ADI16855.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0010_13E22]
          Length = 296

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 6/221 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E + RI GWR+F+ +RL L+  T +PRP++E +V +ALA + P        R+LD
Sbjct: 68  RRLGGEPVSRIRGWREFWTLRLELAPATLDPRPDSETIVAAALAATDPG----KPCRMLD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--V 161
           LG GTGA+ LA L E P   G GVDI+ +A+E A  NA  NG+S R D +  D+      
Sbjct: 124 LGCGTGALLLACLSERPDATGTGVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVA 183

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G++D+I+ NPPYI +  +D L +EV  FDPR++LDGG DGL  +R +   ++  L++ G
Sbjct: 184 PGIYDLILCNPPYIPAGEIDGLAVEVACFDPRLALDGGDDGLDCWRAVLPRIAAGLSRGG 243

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +EIG  Q+  V+ +     L  +   KD+ G  R L+ 
Sbjct: 244 RACLEIGAGQRDAVLGLAARAGLCEIGREKDFAGICRCLVL 284


>gi|260576768|ref|ZP_05844753.1| modification methylase, HemK family [Rhodobacter sp. SW2]
 gi|259021020|gb|EEW24331.1| modification methylase, HemK family [Rhodobacter sp. SW2]
          Length = 284

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 10/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A RD+   L    GL   ++ +   D +  D       N   RS + + + +I G R F+
Sbjct: 24  AARDARHLLAHAMGLPPDRLTLHLADPLTPDAAALLAANLAARS-QRQPVSQITGNRLFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE L+ +ALA        +   R+LDLGTG+G + L LL E P 
Sbjct: 83  GRNFRVTQDVLDPRPETESLIAAALA--------QPFQRVLDLGTGSGVLLLTLLAERPA 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D+S  AL +A++NA T  ++ R     SDW ++V G +D++V+NPPYI    + 
Sbjct: 135 ASGLGIDLSPAALNVAQANAETLSLANRATFALSDWLTAVPGQYDLVVANPPYIAEAEMA 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA GV+ HL   G   VEIG  Q   V  +F +
Sbjct: 195 ALAPEVRLWEPHLALTPGGDGLDAYRAIAAGVAPHLAPGGRLLVEIGPTQAQAVSGLFRA 254

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  +    D  G DRV+
Sbjct: 255 CGLPDIRVLPDLDGRDRVI 273


>gi|260433481|ref|ZP_05787452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417309|gb|EEX10568.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 281

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 142/257 (55%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H +LG R+FY  
Sbjct: 28  RDARVLLAHAARIEASRVTLIAPEELSPEIAERYEQLVSLRAIRVPVSH-LLGEREFYGR 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE L+++AL+        +   R+LDLG G+G + + LL E     
Sbjct: 87  RFRVSRDVLDPRPETEALIEAALS--------QPFDRVLDLGVGSGCILVTLLAERTSAT 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVD+S  A   A +NAVT+GV +R +  +SDWF ++ G FD+IVSNPPYI    +D L
Sbjct: 139 GLGVDLSEAACLQASANAVTHGVQDRAEIQRSDWFENIGGYFDLIVSNPPYIALDEMDGL 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ +PR++L    DGL  YR IA G   HL   G   VEIG  Q   V  +F++  
Sbjct: 199 SPEVREHEPRLALTDEADGLDAYRRIAAGAPDHLMPGGRILVEIGPTQAKAVSALFDAAG 258

Query: 244 LFLVNAFKDYGGNDRVL 260
           L  +    D  G DRV+
Sbjct: 259 LSDIRIIPDLDGRDRVV 275


>gi|254465042|ref|ZP_05078453.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium Y4I]
 gi|206685950|gb|EDZ46432.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium Y4I]
          Length = 283

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 139/257 (54%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G R+FY  
Sbjct: 26  RDARVLLAHAARIEASRVTLIAPEELAPEVAERYEQLIALRAVRVPVSH-LIGEREFYGR 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE+L+++ALA            R+LDLG G+G + + LL E     
Sbjct: 85  RFKVSRDVLDPRPETEILIEAALA--------EPYSRVLDLGVGSGCILVTLLAERQEAT 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVDIS  A   A +NAV + V  R D  QSDWF  VEG FD+IVSNPPYI    ++ L
Sbjct: 137 GLGVDISEAACLQASANAVLHRVQARADIRQSDWFEGVEGQFDLIVSNPPYIALDEMEGL 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P I+L  G DGL  YR IA  V+ HL   G   +EIG +Q   V  + E   
Sbjct: 197 SAEVRGHEPGIALTDGGDGLGAYRRIAAQVTGHLAPGGRVLLEIGPSQGRAVSALLEEAG 256

Query: 244 LFLVNAFKDYGGNDRVL 260
           L  +   +D  G DRV+
Sbjct: 257 LSGIAVLQDLDGRDRVV 273


>gi|329847925|ref|ZP_08262953.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Asticcacaulis biprosthecum C19]
 gi|328842988|gb|EGF92557.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Asticcacaulis biprosthecum C19]
          Length = 284

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   T  +   +I DP   L   Q   L + + R  K E + RILG + F+ + L
Sbjct: 27  DARLLLEAATDATRTDIITDPYRELTAEQEDTLNSYLDRRTKREPVARILGRKGFWKLLL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS     PRPETE++VD  L  S P     D   I DLG G+GA+ L++L E P  KG+
Sbjct: 87  NLSDHVLIPRPETEVIVDMILKQSQPS----DAFTIADLGIGSGAILLSVLAERPAAKGL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G DIS +AL +A+ NA   G+  R   L++ W S + +  FD++ SNPPYI S ++  L 
Sbjct: 143 GTDISEEALAVARDNAANLGLDGRAAFLRTSWGSGLADASFDIVASNPPYIRSDVIPTLD 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV++ DP ++LDGG  GL+ Y  +A  + R L   G   +EIG++Q  DV ++      
Sbjct: 203 PEVKNHDPHLALDGGPTGLAAYEELAPEIFRLLKPGGRAWLEIGFDQSQDVEKLMNDAGF 262

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V  + D     RV+   +
Sbjct: 263 LNVATWLDLSNLPRVVTATK 282


>gi|297181090|gb|ADI17289.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0070_17D04]
          Length = 296

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 140/259 (54%), Gaps = 6/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L    GL    +  +  +  DD         + R L  E + RI GWR+F+ +RL
Sbjct: 30  DSRLLLGTALGLDRAVLPHETLAGFDDTAAAMFEAFLNRRLGGEPVSRIRGWREFWTLRL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L+  T +PRP++E +V +ALA + PR       R+LDLG GTGA+ LA L E P   G 
Sbjct: 90  ELTPATLDPRPDSETIVAAALAATDPR----KPCRMLDLGCGTGALLLACLSERPDATGT 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
           GVDI+ +A+E A  NA  NG+S R D +  D+       G++D+I+ NPPYI +  +D L
Sbjct: 146 GVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVAPGIYDLILCNPPYIPAGEIDGL 205

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            +EV  FDP ++LDGG DGL  +R +   ++  L++ G   +EIG  Q+  V+ +     
Sbjct: 206 AVEVACFDPHLALDGGDDGLDCWRAVLPRIAASLSRGGRACLEIGAGQEDAVLGLAAKVG 265

Query: 244 LFLVNAFKDYGGNDRVLLF 262
           L  +   KD  G  R L+ 
Sbjct: 266 LCEIGREKDLAGICRCLVL 284


>gi|145642041|ref|ZP_01797612.1| HemK [Haemophilus influenzae R3021]
 gi|145273221|gb|EDK13096.1| HemK [Haemophilus influenzae 22.4-21]
          Length = 292

 Score =  159 bits (402), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  P   
Sbjct: 86  NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELEPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF      +V   +DYG N+RV L
Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287


>gi|16273459|ref|NP_439708.1| hypothetical protein HI1559 [Haemophilus influenzae Rd KW20]
 gi|260580340|ref|ZP_05848169.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae RdAW]
 gi|1170230|sp|P45253|HEMK_HAEIN RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.HindHemKP
 gi|1574403|gb|AAC23208.1| hemK protein (hemK) [Haemophilus influenzae Rd KW20]
 gi|260093017|gb|EEW76951.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae RdAW]
          Length = 292

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DY  N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYSDNERVTL 287


>gi|299132854|ref|ZP_07026049.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Afipia sp. 1NLS2]
 gi|298592991|gb|EFI53191.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Afipia sp. 1NLS2]
          Length = 292

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/233 (39%), Positives = 131/233 (56%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  L    +I      L+  +   L + + R +  E I RILG ++F+ +  
Sbjct: 30  DARLLLGDVLQLDLTGLIAAAARTLNANETAALESRVQRRIDGEPIARILGHKEFWGLSF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TLS  T  PRP+TE +V++AL          D + I D+GTG+GA+ LALL E P  +G+
Sbjct: 90  TLSPATLVPRPDTETIVEAALDILKQDGRLNDALHISDIGTGSGAILLALLSELPNAQGI 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DI+  A+  A  NA   G++ R   ++ ++  ++ G FD+IVSNPPYI S  +D L +
Sbjct: 150 GTDINPDAIHTATRNAAALGLNGRARFIECNYADALRGPFDLIVSNPPYIPSRDIDDLAI 209

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           EVR  DPR++LDGG DGL  YR IA      L   G+  +EIG  Q+ DV R+
Sbjct: 210 EVRAHDPRLALDGGPDGLDAYRVIAPAAFELLVPGGVVILEIGQGQERDVARL 262


>gi|56697311|ref|YP_167677.1| HemK family modification methylase [Ruegeria pomeroyi DSS-3]
 gi|56679048|gb|AAV95714.1| modification methylase, HemK family [Ruegeria pomeroyi DSS-3]
          Length = 271

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/210 (41%), Positives = 119/210 (56%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G RDFY  R  +S +  +PRPETE L+++AL              +LDLG G+GA
Sbjct: 64  VSHLVGERDFYGRRFKVSGEVLDPRPETETLIEAAL--------NAPFEHVLDLGVGSGA 115

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + LL E P   G+GVD+S  A   A +NAV + V  R D  +SDWF +VEG FD+IVS
Sbjct: 116 ILVTLLAERPSATGLGVDLSEAACLQASANAVLHRVEARADIRRSDWFGAVEGRFDLIVS 175

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI    ++ L  EVR  +P ++L  G DGL  YR IA G   +L   G   VEIG  
Sbjct: 176 NPPYIALSEMEALAPEVRRHEPELALTDGGDGLGAYRHIAAGAPDYLLPGGRLLVEIGPT 235

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V R+F++  L  +    D  G DRV+
Sbjct: 236 QAQAVSRLFQAAGLSGLRVIPDLDGRDRVV 265


>gi|301170296|emb|CBW29902.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae 10810]
          Length = 292

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P  +
Sbjct: 86  NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI 
Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYIN 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|209883258|ref|YP_002287115.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209871454|gb|ACI91250.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 290

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 131/232 (56%), Gaps = 1/232 (0%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD  +   L + I R +  E + RILG R+F+ +   LS  T  PRP+TE L+++ L   
Sbjct: 54  LDTSEAQRLEDVIRRRIAGEPVARILGRREFWGLTFALSPATLVPRPDTETLIEAVLDIL 113

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                    +RILD+GTG+GA+ LALL E P   G+G DI+  A+  A  NA T G++ R
Sbjct: 114 KREGRTAAPLRILDIGTGSGAILLALLSELPNTTGIGTDINPAAIATAADNAATLGLASR 173

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              +  D+  ++ G FD++VSNPPYI +  +D L LEVR  DPR++LDGG DGL+ YRTI
Sbjct: 174 ATFVACDYAGALRGPFDIVVSNPPYIPTADIDHLDLEVRAHDPRLALDGGADGLTAYRTI 233

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVL 260
           A      L   G+ +VEIG  Q   V  +     L +    K D GG  RV+
Sbjct: 234 APLAFALLAPSGIAAVEIGQRQAHGVATLMAEAGLAVPAPAKADLGGVPRVV 285


>gi|118588513|ref|ZP_01545922.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
 gi|118439219|gb|EAV45851.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
          Length = 282

 Score =  158 bits (400), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 129/219 (58%), Gaps = 6/219 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + L+   + RILG R+FY  R  L+  T EPRP+TE L+D+ L     R    +   + D
Sbjct: 63  KRLEGMPVGRILGEREFYGRRFLLNPATLEPRPDTETLIDAVLE----RCTADEAPVMCD 118

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTGTGA+ + LL E P  + + VD+S +ALE A SNA  +GV +R  T+++D+ S++  
Sbjct: 119 IGTGTGAIAVTLLAELPRSRMIAVDLSEQALECAASNAALHGVGDRLLTVRADYTSALRP 178

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG FD +VSNPPYI + ++  L  EV   DP+++LDGG DGL+ Y  I     + L   G
Sbjct: 179 EGGFDWVVSNPPYIRTAVLAELSREVIQHDPKLALDGGEDGLTAYVRILTDAEKLLRPGG 238

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             ++EIG++Q  D+ +         +   KD  GNDRV+
Sbjct: 239 RIALEIGFDQGADLKKQLRHHGFVEIEIIKDLSGNDRVV 277


>gi|148826081|ref|YP_001290834.1| hypothetical protein CGSHiEE_05375 [Haemophilus influenzae PittEE]
 gi|229847125|ref|ZP_04467230.1| HemK [Haemophilus influenzae 7P49H1]
 gi|148716241|gb|ABQ98451.1| HemK [Haemophilus influenzae PittEE]
 gi|229809954|gb|EEP45675.1| HemK [Haemophilus influenzae 7P49H1]
 gi|309973232|gb|ADO96433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae R2846]
          Length = 292

 Score =  158 bits (399), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHVTGKSRTQILTFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALARSNAERNQLNVQF--LQSSWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 VQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF      +V   +DYG N+RV L
Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287


>gi|84516321|ref|ZP_01003681.1| modification methylase, HemK family [Loktanella vestfoldensis
           SKA53]
 gi|84510017|gb|EAQ06474.1| modification methylase, HemK family [Loktanella vestfoldensis
           SKA53]
          Length = 277

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/208 (40%), Positives = 118/208 (56%), Gaps = 8/208 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG+RDFY+ R  ++ D  +PRP+TE +V +ALA             +LDLGTG+G 
Sbjct: 67  LSHLLGYRDFYDHRFIVTPDVLDPRPDTEAIVTAALADPF--------AHVLDLGTGSGC 118

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L+LL   P   G+GVD+S  AL +A  N    G+ +R   ++SDWF++V G FD+IVS
Sbjct: 119 ILLSLLAARPQATGLGVDLSDAALAVAAQNRSALGLDQRATLVRSDWFTAVTGSFDLIVS 178

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI +  +  L  EVR  +P ++L  G DGLS+YR IA G   HL   G   VEIG  
Sbjct: 179 NPPYIAATEMAGLQPEVRLHEPHLALTDGADGLSYYRIIAAGAGAHLAPGGRLIVEIGPT 238

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           Q  DV  +  +     +    D  G DR
Sbjct: 239 QASDVSALLRAAGFTDLRVIPDLDGRDR 266


>gi|145632950|ref|ZP_01788683.1| HemK [Haemophilus influenzae 3655]
 gi|144986606|gb|EDJ93172.1| HemK [Haemophilus influenzae 3655]
          Length = 292

 Score =  157 bits (398), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGQFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|296447418|ref|ZP_06889343.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylosinus trichosporium OB3b]
 gi|296255038|gb|EFH02140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylosinus trichosporium OB3b]
          Length = 304

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+ + L     +++  ++++P + L    +  L +   R    E + RILG R F+   
Sbjct: 33  RDARALLLAAGEMTAADLLLEPHARLSPCVQRRLDDFARRRAAREPVTRILGARGFWTQD 92

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ D  +PR +TE LV  ALA  L R  + D + ILDLG G+GA+  ALL E P  + 
Sbjct: 93  LVVAPDVLDPRADTETLV--ALALDLLRERRNDALTILDLGVGSGAITCALLSELPQARA 150

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VGVD+S +A   A  N    G++ R   L+  W  ++E  FD++VSNPPY+ S  +  L 
Sbjct: 151 VGVDLSGEACAAASVNIARCGIAARATILRGRWAQALETRFDLVVSNPPYVASGEIATLA 210

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  DP ++LDGG DGL+ YR I   + R L    L  +E G  Q   +  + E+  L
Sbjct: 211 PEVRLHDPSLALDGGADGLACYREIIADLPRILAPHALAVLEAGAGQAASIAALLEAAGL 270

Query: 245 FLVNAFKDYGG 255
            +    +D+ G
Sbjct: 271 EIAEIREDFAG 281


>gi|257464823|ref|ZP_05629194.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor 202]
 gi|257450483|gb|EEV24526.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor 202]
          Length = 289

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 146/257 (56%), Gaps = 6/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    ++VL + +   L   + R  K E I  ILG ++F+++ L
Sbjct: 29  DANVLLQAVTKRSKSAIFAFSETVLSEAELTELNALLARRAKGEPIAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S+ T  PRP+TE LV+ AL ++  R+  ++ ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  AVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELGEKAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
           +GVD   +A+++A+ N    G  + RF  LQSDWFS +E   FD+IVSNPPYI+    + 
Sbjct: 149 IGVDKQAEAVQLAEQNRQNLGFEQVRF--LQSDWFSVLENHCFDLIVSNPPYIDKDDENL 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GLS  + I +    +L K G   +E G+ Q  DV +IF+  
Sbjct: 207 TKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAADVQQIFKQN 265

Query: 243 KLFLVNAFKDYGGNDRV 259
           +   +  FKDYG  DR+
Sbjct: 266 QWDKIETFKDYGNQDRI 282


>gi|148826785|ref|YP_001291538.1| hypothetical protein CGSHiGG_00160 [Haemophilus influenzae PittGG]
 gi|148718027|gb|ABQ99154.1| HemK [Haemophilus influenzae PittGG]
          Length = 292

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 150/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF      +V   +DYG N+RV L
Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287


>gi|84503528|ref|ZP_01001579.1| modification methylase, HemK family protein [Oceanicola batsensis
           HTCC2597]
 gi|84388018|gb|EAQ01066.1| modification methylase, HemK family protein [Oceanicola batsensis
           HTCC2597]
          Length = 279

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/223 (43%), Positives = 122/223 (54%), Gaps = 8/223 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R L HE + RI+G R FY     +S  T +PRPETE LV  AL        +R   R+
Sbjct: 63  IARRLLHEPVSRIVGGRWFYGRWFDVSPATLDPRPETETLVQIAL--------ERRFDRV 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTG + ++LL E    +GVG D+S  AL  A  NA T GV++R   ++SDW + V
Sbjct: 115 LDLGTGTGCIVISLLAERADARGVGSDLSEGALATAAENAATCGVADRLSLVRSDWMAGV 174

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +G FD+IVSNPPYI    +  L  +V  FDPR +L  G+DGL  YR IA      L   G
Sbjct: 175 DGTFDLIVSNPPYIAPEEMSGLAPDVTKFDPRQALTDGVDGLGAYRAIAAQAPARLVPGG 234

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              VEIG  Q   V  +F    L  +  F D  G DRV+   R
Sbjct: 235 RLLVEIGPTQAGAVAGLFRDAGLTEIRTFPDLDGRDRVVAALR 277


>gi|110680313|ref|YP_683320.1| HemK family modification methylase [Roseobacter denitrificans OCh
           114]
 gi|109456429|gb|ABG32634.1| modification methylase, HemK family, putative [Roseobacter
           denitrificans OCh 114]
          Length = 271

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 125/210 (59%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           + +++G R+FY  R  ++ +  +PRPETE L++ AL+     +        LDLG G+G 
Sbjct: 64  VSQLIGGREFYGRRFEITREVLDPRPETESLIEVALSAPFNTV--------LDLGVGSGC 115

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + LL E P   GV VD+S  A   A +NAV + V++R   L+SDWF +VEG FD+IVS
Sbjct: 116 LIVTLLAERPDATGVAVDLSEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVS 175

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPY+ +  +  +  E+RD +PR++L    DGL+ YR IA     +L+ DG   VE G+ 
Sbjct: 176 NPPYLAASEMAQVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSADGRVLVETGWR 235

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q  DV  IFE++    ++   D GG DR++
Sbjct: 236 QASDVRDIFEAQGWGELSILPDLGGRDRIV 265


>gi|163735802|ref|ZP_02143231.1| modification methylase, HemK family, putative [Roseobacter
           litoralis Och 149]
 gi|161390888|gb|EDQ15228.1| modification methylase, HemK family, putative [Roseobacter
           litoralis Och 149]
          Length = 277

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 127/210 (60%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           + +++G R+FY  R  ++ +  +PRPETE L+++AL  S P  +       LDLG G+G 
Sbjct: 70  VSQLIGSREFYGRRFNITREVLDPRPETESLIEAAL--SAPFSDA------LDLGVGSGC 121

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + LL E P  KGV +DIS  A   A +NAV + V++R   L+SDWF +VEG FD+IVS
Sbjct: 122 LIVTLLAERPDAKGVAIDISEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVS 181

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPY+ +  +  +  E+RD +PR++L    DGL+ YR IA     +L+ +G   VE G+ 
Sbjct: 182 NPPYLAASEMSQVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSAEGRVLVETGWQ 241

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V  IFE++    ++   D GG DR++
Sbjct: 242 QASSVRDIFEAQGWGELSILPDLGGRDRIV 271


>gi|126725347|ref|ZP_01741189.1| Putative methylase [Rhodobacterales bacterium HTCC2150]
 gi|126704551|gb|EBA03642.1| Putative methylase [Rhodobacterales bacterium HTCC2150]
          Length = 277

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/211 (40%), Positives = 122/211 (57%), Gaps = 8/211 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           + +I+G R FY     ++ D  +PRPETE+L+ +AL        ++   ++LDLGTG+GA
Sbjct: 70  VSQIIGRRHFYGRDFIVTPDVLDPRPETEILISAAL--------EQPFQKVLDLGTGSGA 121

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + LL E     G G DIS  AL +A  NAV   VSER D ++SDWF +V+G FD+IVS
Sbjct: 122 ILVTLLAEQMGANGQGADISDAALNVASRNAVALNVSERADFVKSDWFENVDGDFDLIVS 181

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPY+ +     L   VR+F+P+++L  G DGL  YR I + +   L   G   VEIG  
Sbjct: 182 NPPYVTADEYSALDKGVREFEPKLALTPGGDGLMPYRLITERIQSFLRPFGRLLVEIGPT 241

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Q   V  +F+   L  V   KD+   DRV++
Sbjct: 242 QGAAVKAMFKESGLSEVQVLKDFDARDRVVI 272


>gi|284047801|ref|YP_003398140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidaminococcus fermentans DSM 20731]
 gi|283952022|gb|ADB46825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidaminococcus fermentans DSM 20731]
          Length = 302

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 140/261 (53%), Gaps = 7/261 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V   S  Q+  + D  L++++       + R    E +  ILG + F     
Sbjct: 32  DAEVLLCAVLDKSRIQLYTNFDEPLEEQELKQYRGYVARRAAREPVAYILGHKGFLQYDF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ DT  PRPETELLV+  ++ +      R  VRILDLG G+GA+  +LL E P  +G+
Sbjct: 92  KVTKDTLIPRPETELLVEQLVSLN----RDRGPVRILDLGCGSGAIIDSLLAELPEARGM 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
           GVDIS  A  + + NA + GV +R +T+ SD +  V  E  F V+VSNPPYI    +  L
Sbjct: 148 GVDISPGAAAVTRENAQSLGVGDRLETVVSDLYEKVPREEKFQVLVSNPPYIPEGDLAGL 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV   +PR +LDGG DGL  YR I   +  +L+ +G+ + EIG  Q  DV R+     
Sbjct: 208 QAEVHR-EPRRALDGGRDGLDFYRRILRDLWSYLDPEGMAAFEIGQGQGEDVARLCREAG 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
           L  V   KDYG  DR++   +
Sbjct: 267 LDCVKVRKDYGDMDRMVFAAK 287


>gi|307256017|ref|ZP_07537805.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306865439|gb|EFM97334.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
          Length = 296

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 147/256 (57%), Gaps = 4/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F+++ L
Sbjct: 29  DTNLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL ++  R++ +  +RILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPHTLIPRPDTECLVEVALDWAYKRLKIQQTLRILDLGTGTGAIALALASELGNNVQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+++A++N    G S     LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 149 LGVDFKAEAVQLAETNRQNLGFS-NVSFLQSDWFSALENQQFDLIVSNPPYIDQQDENLQ 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    DGLS  + I      HLN +G   +E G+ Q   V +IF+  +
Sbjct: 208 YGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQIFQQYQ 266

Query: 244 LFLVNAFKDYGGNDRV 259
              + +F+DYGGNDR+
Sbjct: 267 WDEIASFQDYGGNDRL 282


>gi|312115444|ref|YP_004013040.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220573|gb|ADP71941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 306

 Score =  156 bits (395), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/264 (38%), Positives = 133/264 (50%), Gaps = 8/264 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV---RSLKHESIHRILGWRDFYN 62
           D+        G SS +++   D+ L       L  AI    R    E + RI+G R+F+ 
Sbjct: 26  DARLLSAYAAGFSSEEIVTKRDTALPPE---ILDRAIAVAQRRFAGEPVSRIVGTREFWG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS  T +PRP+TE+LVD+ LA+          +RILDLGTGTG +  ALL E P  
Sbjct: 83  MPFGLSPHTLDPRPDTEVLVDAGLAWCRKHDLANAPLRILDLGTGTGCILAALLSELPKA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVD 181
            GVGVD S  AL  A++N    G+S R      DW  +  +  FD+I  NPPYIE+  + 
Sbjct: 143 TGVGVDRSEGALRTARANFARLGLSSRAFFFCGDWGVALADATFDIIACNPPYIETADIA 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFE 240
            L  EVRDFDP ++LDGG DGL  YR I    SR L   GL   E G+ Q   V   + E
Sbjct: 203 GLCAEVRDFDPALALDGGKDGLKAYRDIVPQASRLLRVPGLLIFETGHRQARSVRDMVTE 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
               F    F D  G +R +   R
Sbjct: 263 LDAGFQTEIFLDLAGIERAVAGVR 286


>gi|319897177|ref|YP_004135372.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Haemophilus influenzae F3031]
 gi|317432681|emb|CBY81044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3031]
          Length = 292

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  L   + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLIALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E      
Sbjct: 86  NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSSICQ 145

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRLISLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSCWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|260583302|ref|ZP_05851077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae NT127]
 gi|260093662|gb|EEW77575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae NT127]
          Length = 292

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 151/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E +P   
Sbjct: 86  NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELAPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMSDVVALAQSNAERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANGEGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF      +V   +DYG N+RV L
Sbjct: 263 SIFLENYWEMVETVRDYGDNERVTL 287


>gi|332140930|ref|YP_004426668.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550952|gb|AEA97670.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 285

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 141/262 (53%), Gaps = 9/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   PD  L   Q     +AI R    E +  I+G RDF+ + L
Sbjct: 23  DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPF 121
             SS T  PRP+TE+LV+  + ++   +      +  + I DLGTGTGA+ LAL  E P 
Sbjct: 83  FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGTGTGAIALALASELPQ 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
              +GVD    A+ +AK NA +N ++  RF  +QSDWFS++ G  FD+IVSNPPYI+   
Sbjct: 143 ASVIGVDFLSDAVALAKRNANSNKINNARF--MQSDWFSALRGHTFDIIVSNPPYIDETS 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P+ +L  G  GLS  + I    S +LN +GL + E G++Q   V  + 
Sbjct: 201 PYLNEGDVR-FEPKSALTSGDSGLSDIKHIISHASTYLNSNGLLAFEHGFDQGDAVKALL 259

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           ++     V   KDYG NDRV L
Sbjct: 260 QTSGFVNVKTIKDYGNNDRVTL 281


>gi|315500227|ref|YP_004089030.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Asticcacaulis excentricus CB 48]
 gi|315418239|gb|ADU14879.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Asticcacaulis excentricus CB 48]
          Length = 289

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 135/257 (52%), Gaps = 5/257 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG +   ++ DP  +L   Q+  L + + R  K   + RILG + F+ + L
Sbjct: 30  DARLLLEAATGYTRTDILTDPYKLLTAEQKATLDDYLTRREKRVPVARILGRKGFWKLLL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L+     PRPETE +VD  L  +    E+     + DLG G+GA+ L++L E P  KG+
Sbjct: 90  DLTPAVLVPRPETECIVDMILKTT----EEGQAFTLADLGVGSGAILLSVLSERPAAKGL 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G D+S +AL +A+ NA   G+  R   L++ W + + +  FD + SNPPYI S ++  L 
Sbjct: 146 GTDVSEEALAVARDNAANLGLDGRAAFLRTSWGAGLADASFDFVASNPPYIRSEVIPTLD 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP ++LDGG  GL  Y  +     R L   G   +EIGY+Q   V  + +    
Sbjct: 206 PEVRDHDPHLALDGGESGLDAYIEMIPEAFRILKAGGTAWMEIGYDQSAAVEDLMKKAGF 265

Query: 245 FLVNAFKDYGGNDRVLL 261
           F V  FKD     R+++
Sbjct: 266 FNVVTFKDLSDLPRIVI 282


>gi|68249926|ref|YP_249038.1| hypothetical protein NTHI1574 [Haemophilus influenzae 86-028NP]
 gi|145631801|ref|ZP_01787561.1| HemK [Haemophilus influenzae R3021]
 gi|68058125|gb|AAX88378.1| HemK [Haemophilus influenzae 86-028NP]
 gi|144982591|gb|EDJ90141.1| HemK [Haemophilus influenzae R3021]
          Length = 292

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 148/265 (55%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF-- 121
            +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  P   
Sbjct: 86  NVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELEPICQ 145

Query: 122 -----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRHIPLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L     G +  R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DY  N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYSDNERVTL 287


>gi|86747199|ref|YP_483695.1| HemK family modification methylase [Rhodopseudomonas palustris
           HaA2]
 gi|86570227|gb|ABD04784.1| modification methylase, HemK family [Rhodopseudomonas palustris
           HaA2]
          Length = 289

 Score =  155 bits (392), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/251 (41%), Positives = 142/251 (56%), Gaps = 3/251 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   TGL    +IV  + VL   +   L    VR L  E + RILG R+F+ + L
Sbjct: 29  DARLLIGEATGLDLTGLIVQAERVLTLDEAERLDAFAVRRLAGEPVARILGVREFWGLAL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS DT  PRP+TE +V++AL     R E R    ILDLGTG+GA+ LALL E P   GV
Sbjct: 89  RLSDDTLVPRPDTETVVEAALDHL--RAEARARPLILDLGTGSGAILLALLSECPDAFGV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL  A++NA   G+++R   +  D+ +++ G FD+IVSNPPYI +  +  L +
Sbjct: 147 ATDISLGALRAARANAAALGLADRAGFVACDYAAALGGSFDLIVSNPPYIPASAIAALDV 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+ DPR +LDGG DGL  YR I    +R L + G   VEIG  Q  DV  +  +  L 
Sbjct: 207 EVREHDPRRALDGGEDGLDAYRRIIPEAARLLGRGGALVVEIGQGQGDDVAALMRASGLA 266

Query: 246 LVN-AFKDYGG 255
           +     +D GG
Sbjct: 267 VPEPPRRDLGG 277


>gi|83859677|ref|ZP_00953197.1| hemK family protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852036|gb|EAP89890.1| hemK family protein [Oceanicaulis alexandrii HTCC2633]
          Length = 285

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L      S  +++ +  S + D +       I R  + E +  ILG + F+
Sbjct: 24  EAADDARRLLLAAFEGSPARLLTEMASEMPDAELERFDALIGRREQREPLSHILGTQPFW 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ D   PR +TE L+++ALA + P  ++R  +RILD+ TG+GA+ LALL E P 
Sbjct: 84  TLELKVTRDVLTPRADTETLIEAALA-AYP--DRRAPLRILDIATGSGAIILALLSEFPN 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G   DIS  AL +A+ NA   G+++R       W   +EG FD++VSNPPYI + ++D
Sbjct: 141 ATGAATDISEAALAVAQENADLTGLADRVSFQHQSWADGLEGPFDLLVSNPPYIATAVID 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++PR++L+GG  G   Y  +    SR L   GL   EIGY+Q V        
Sbjct: 201 ELEPEVRAYEPRMALEGGRTGFEPYPHLFAEASRLLVPGGLALFEIGYDQGVRAREAASE 260

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                    KD  G+DRV+
Sbjct: 261 AGAKETRILKDLAGHDRVV 279


>gi|254559641|ref|YP_003066736.1| protein-( glutamine-N5) methyltransferase [Methylobacterium
           extorquens DM4]
 gi|254266919|emb|CAX22718.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens DM4]
          Length = 302

 Score =  155 bits (391), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 135/226 (59%), Gaps = 6/226 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A  R L  E + RILG  +F+ +   L  +T  PRP+TE +V++AL   LP  E+  
Sbjct: 71  LRQAAERRLAGEPVARILGAWEFWGLSFALGPETLVPRPDTESVVETALRL-LP--ERER 127

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R++DLGTG+G + +ALL E P   G+G+D S  AL IA+ NA  NGV++R   L   W
Sbjct: 128 PLRLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAIARRNAAANGVADRAAFLCGSW 187

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216
            +++EG FD+IVSNPPYI + ++  L  EVR  DP+ +LDGG DGL  YR I   V+R  
Sbjct: 188 LNALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRP 247

Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             L+  G   +EIGY+Q   + R+ +      +   +D  GNDRV+
Sbjct: 248 GLLSAQGALVLEIGYDQANALTRLAQEAGFEDIGVGQDLAGNDRVV 293


>gi|240137463|ref|YP_002961934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens AM1]
 gi|240007431|gb|ACS38657.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens AM1]
          Length = 302

 Score =  154 bits (390), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 6/226 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A  R L  E + RILG  +F+ +   L  +T  PRP+TE +V++AL   LP  E+  
Sbjct: 71  LRQAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--ERER 127

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R++DLGTGTG + +ALL E P   G+G+D S  AL IA+ NA  NGV++R   L   W
Sbjct: 128 PLRLIDLGTGTGCILVALLHERPGAVGIGLDRSAAALAIARRNAAANGVADRAAFLCGSW 187

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216
             ++EG FD+IVSNPPYI + ++  L  EVR  DP+ +LDGG DGL  YR I   V+R  
Sbjct: 188 LDALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRP 247

Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             L+  G   +EIGY+Q   + R+ +      +   +D  GNDRV+
Sbjct: 248 GLLSAQGALVLEIGYDQANALTRLAQEAGFEDIGFGRDLAGNDRVV 293


>gi|54288339|gb|AAV31627.1| putative protoporphyrinogen oxidase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 294

 Score =  154 bits (390), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 143/237 (60%), Gaps = 2/237 (0%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           S LD   +  L+  + R L  E I RI GWR+F+++R  +S  T +PRP++E ++ +A+ 
Sbjct: 54  SPLDAGCQRHLSAMLERRLAGEPISRIRGWREFWSLRFAISQSTLDPRPDSETMIQAAVT 113

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +++    + D +R LDLGTG+G + L+LL E P   G+G+D+S  A+ +A +NA + G+ 
Sbjct: 114 WAIANSAQMDPLRCLDLGTGSGCLLLSLLSELPQAIGIGIDVSLDAIGVAVANANSLGLG 173

Query: 148 ERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +R    Q  +   +   G FD+I+SNPPYI ++ +  L ++VR+FDP ++LDGG DG+S 
Sbjct: 174 DRVHFHQHSFCDDLSNFGSFDIILSNPPYIPTLDIAGLAVDVREFDPALALDGGFDGMSC 233

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +R +   +   L+ +G   VEIG  Q+  +V++  +  L LV + +D     R L F
Sbjct: 234 WRGLLPRLGELLSDEGAAFVEIGKGQEAAIVQLASNANLELVKSHRDLSDVIRCLQF 290


>gi|163746456|ref|ZP_02153814.1| modification methylase, HemK family, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380341|gb|EDQ04752.1| modification methylase, HemK family, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 280

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 131/239 (54%), Gaps = 9/239 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
            ++ P+ +  D    F     +R+++   + +++G R FY    ++S D  +PRPETE L
Sbjct: 45  TLIAPEEIAPDVAERFEQLIALRAVRV-PVSQLIGRRAFYGRDFSISRDVLDPRPETETL 103

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD AL     RI        LDLGTG+G + + LL E     G+GVD+S  A   A +NA
Sbjct: 104 VDLALGSHFDRI--------LDLGTGSGCILVTLLAERAQATGLGVDLSEAACLQASANA 155

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V +GV+ER +  QSDWFS+VEG FD+I+SNPPY+ +  +  +  E+R  +P ++L  G D
Sbjct: 156 VQHGVAERAEIRQSDWFSAVEGRFDLILSNPPYLAAEEMADVSPELRQHEPEMALTDGQD 215

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           GLS YR IA     +L  +G   VEIG+ Q   V  IF       V    D  G  RV+
Sbjct: 216 GLSIYRIIATEAQGYLTPEGRVMVEIGWQQGEAVQDIFTKAGWGRVTLAHDLDGRPRVV 274


>gi|239996063|ref|ZP_04716587.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii ATCC 27126]
          Length = 279

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 133/257 (51%), Gaps = 5/257 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   P+  LD  Q+      + +  + E +  I+G RDF+ + L
Sbjct: 23  DAKVMLANILGKSQTYLFTWPNKTLDAAQKAQFEADVAKRKRGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
             S DT  PRP+TE+LV+  L ++         + I DLGTGTGA+ LAL  E P     
Sbjct: 83  FTSPDTLIPRPDTEVLVEHVLNWA--NQHSSASLSICDLGTGTGAIALALASELPEASVT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
           GVD    A+ +A  NA  N ++     +QSDWFS++ G  FD+IVSNPPYIE        
Sbjct: 141 GVDFQAGAVNLATRNAQANSIANAH-FVQSDWFSALAGQTFDIIVSNPPYIEESSPYLNE 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   + I +   ++LNK  L + E G++Q   V  +      
Sbjct: 200 GDVR-FEPKTALTSGSDGLDDIKQIINNAPQYLNKGALLAFEHGFDQGAAVNALLVDAGF 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   KDYG NDRV L
Sbjct: 259 VEVKTVKDYGDNDRVTL 275


>gi|165977489|ref|YP_001653082.1| protein-glutamine N-methyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877590|gb|ABY70638.1| protein-glutamine N-methyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 320

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 145/256 (56%), Gaps = 4/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F+++ L
Sbjct: 53  DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 113 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 172

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 173 IGVDFKLEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDQQDENLQ 231

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    DGLS  + I      HLN +G   +E G+ Q   V +IF+  +
Sbjct: 232 YGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQIFQQYQ 290

Query: 244 LFLVNAFKDYGGNDRV 259
              + +F+DYGGNDR+
Sbjct: 291 WDEIASFQDYGGNDRL 306


>gi|254472106|ref|ZP_05085506.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudovibrio sp. JE062]
 gi|211958389|gb|EEA93589.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudovibrio sp. JE062]
          Length = 294

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 133/256 (51%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        G+    ++++ D  +       +T      L  + + RILG R+F+ +  
Sbjct: 35  DARVLTAEALGIEPRNLVLEYDREISPEVIAVMTRYAEERLAGKPVGRILGKREFWGLEF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +LS  T EPRP+TE LV++ LAF              D+GTGTGA+ +ALL E P    V
Sbjct: 95  SLSQATLEPRPDTETLVEATLAFCQANGGFDKPWVFADIGTGTGAIAIALLSELPNAICV 154

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDIS +ALE A+ NA  NG   RF  ++  +  ++ G FD +VSNPPYI S +++ L  
Sbjct: 155 AVDISEEALETARQNAANNGFESRFIPVRGSYLDALNGAFDFVVSNPPYIRSAVIEGLSH 214

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV+  DP ++LDGG DGL+ Y+ +       L ++    +EIG++Q  ++  +       
Sbjct: 215 EVKQHDPMLALDGGDDGLTAYKELIGNAKLVLKRNSGLLMEIGFDQAEELSTLARELVGL 274

Query: 246 LVNAFKDYGGNDRVLL 261
            V    D  G  RV++
Sbjct: 275 EVRCEHDLAGQPRVIV 290


>gi|145639101|ref|ZP_01794709.1| HemK [Haemophilus influenzae PittII]
 gi|145272073|gb|EDK11982.1| HemK [Haemophilus influenzae PittII]
 gi|309751052|gb|ADO81036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae R2866]
          Length = 292

 Score =  154 bits (388), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 146/265 (55%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE------ 118
            +S  T  PRP+TE+LV+ AL  SL ++E+     RILDLGTGTGA+ LAL  E      
Sbjct: 86  NVSKGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQ 145

Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KRQISLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q   V 
Sbjct: 204 VQDEHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|323138797|ref|ZP_08073861.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocystis sp. ATCC 49242]
 gi|322395945|gb|EFX98482.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocystis sp. ATCC 49242]
          Length = 298

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 139/244 (56%), Gaps = 2/244 (0%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           ++ + P + L +     L++   R    E + RILG R F+ + L ++ D  +PRP+TE 
Sbjct: 52  ELAMRPQAPLAEEHADALSHYAARRAAREPVSRILGERGFWTLDLLVAPDVLDPRPDTET 111

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+++ L   L   ++ + + ILDLGTG+GA+  ALL E P  + V VD+S +A   A +N
Sbjct: 112 LIETTL--DLIGEKRNEPLSILDLGTGSGAIVCALLSELPRARAVAVDLSPQACAAAANN 169

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
               G S R   ++  W +++   FD+IVSNPPY+ +  +  L  EVR  DP ++LDGGI
Sbjct: 170 LARCGFSNRASVMRGRWAAALSERFDIIVSNPPYVRAGEIPQLDPEVRLHDPALALDGGI 229

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL  YR I D + R +  DGL + E+G +Q V V  +  ++   +    +D GG++RV+
Sbjct: 230 DGLDCYREIIDDLPRLVADDGLVAFEVGSDQAVSVASLLGAQGFGVERVGRDLGGHERVV 289

Query: 261 LFCR 264
              R
Sbjct: 290 AARR 293


>gi|163743156|ref|ZP_02150538.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383573|gb|EDQ07960.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 285

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 140/259 (54%), Gaps = 14/259 (5%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G R+FY  
Sbjct: 28  RDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSH-LIGEREFYGR 86

Query: 64  RLTLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           R  +S D  +PRPETE L+++ALA  FS          R+LDLG G+G + + LL E   
Sbjct: 87  RFKVSGDVLDPRPETECLIEAALAEPFS----------RVLDLGLGSGCILVTLLAEQAD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  A   A +NAV + V  R + LQSDWFS+VEG FD+IVSNPPYI    + 
Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEILQSDWFSAVEGQFDLIVSNPPYIALDEMS 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA  +  +L   G   +EIG  Q   V  +  S
Sbjct: 197 DLSDEVRGHEPELALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V   +D  G DRV+
Sbjct: 257 AGLKEVRIIQDLDGRDRVV 275


>gi|163739712|ref|ZP_02147120.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis BS107]
 gi|161386942|gb|EDQ11303.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis BS107]
          Length = 285

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 140/259 (54%), Gaps = 14/259 (5%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  +    +     +R+++    H ++G R+FY  
Sbjct: 28  RDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSH-LIGEREFYGR 86

Query: 64  RLTLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           R  +S D  +PRPETE L+++ALA  FS          R+LDLG G+G + + LL E   
Sbjct: 87  RFKVSGDVLDPRPETECLIEAALAEPFS----------RVLDLGLGSGCILVTLLAEQAD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  A   A +NAV + V  R + LQSDWFS+V+G FD+IVSNPPYI    + 
Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEVLQSDWFSAVDGQFDLIVSNPPYIALDEMS 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA  +  +L   G   +EIG  Q   V  +  S
Sbjct: 197 GLSDEVRGHEPEMALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V   +D  G DRV+
Sbjct: 257 AGLKEVRVIQDLDGRDRVV 275


>gi|255264803|ref|ZP_05344145.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thalassiobium sp. R2A62]
 gi|255107138|gb|EET49812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thalassiobium sp. R2A62]
          Length = 277

 Score =  153 bits (386), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 14/252 (5%)

Query: 17  LSSHQVIVDPDSVL----DD---RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           L++H + V PD +     DD    Q+  L   I R   HE + +++G R F+     ++ 
Sbjct: 29  LAAHVLQVSPDRMTLHMGDDVTAGQKAQLHVLIARRAAHEPVSKLIGQRAFWGRDFAVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D  +PRPETE L+++ L             R+LDLGTG+GA+ + L  E         D+
Sbjct: 89  DVLDPRPETECLIEACLGAG-------PAARVLDLGTGSGAIAVTLAAEWDAAAVTATDL 141

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S  AL++A+ NAV + V  R + + SDWF +V+G +D+IVSNPPYI    +  L  EVR 
Sbjct: 142 SHAALDVARQNAVRHDVGARIEFVGSDWFDAVDGCYDLIVSNPPYIALAEMTGLAPEVRG 201

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            DPR++L    DGL+ YR I DG    +   G  +VEIG  Q   V  + +   L  +  
Sbjct: 202 HDPRMALTDEADGLTCYRIICDGALAKMVSGGRLAVEIGPTQGDAVALMMQEAGLVEIEI 261

Query: 250 FKDYGGNDRVLL 261
             D  G +RV+L
Sbjct: 262 RPDLDGRNRVVL 273


>gi|145629733|ref|ZP_01785529.1| HemK [Haemophilus influenzae 22.1-21]
 gi|144978070|gb|EDJ87849.1| HemK [Haemophilus influenzae 22.1-21]
          Length = 264

 Score =  152 bits (385), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 144/261 (55%), Gaps = 12/261 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L +S 
Sbjct: 2   LLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVSK 61

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE--------SP 120
            T  PRP+TE+LV+ AL  SL ++E+     RILDLGTGTGA+ LAL  E          
Sbjct: 62  GTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQI 121

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI+    
Sbjct: 122 SLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSRWFDNITGKFDLIVSNPPYIDVQDE 179

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q   V  IF+
Sbjct: 180 HLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVRSIFQ 238

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                +V   +DYG N+RV L
Sbjct: 239 ENHWEMVETVRDYGDNERVTL 259


>gi|240950072|ref|ZP_04754374.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor NM305]
 gi|240295447|gb|EER46202.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor NM305]
          Length = 289

 Score =  152 bits (385), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 143/257 (55%), Gaps = 6/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    ++VL + +   L   + R  K E I  ILG ++F+++ L
Sbjct: 29  DANILLQAVTKRSKSAIFAFSETVLSEAELIELNALLARRAKGEPIAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S+ T  PRP+TE LV+ AL ++  R+  ++ ++ILDLGTGTGA+ LAL  E       
Sbjct: 89  AVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELGKKADI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
           +G+D   +A+E+A+ N    G    RF  LQSDWFS +E   FD+IVSNPPYI+    + 
Sbjct: 149 IGLDKQSEAVELAEKNRQKLGFKNVRF--LQSDWFSVLENHCFDLIVSNPPYIDKDDENL 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GLS  + I +    +L K G   +E G+ Q  +V +IF   
Sbjct: 207 TKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAAEVQQIFRQN 265

Query: 243 KLFLVNAFKDYGGNDRV 259
           +   +  FKDYG  DR+
Sbjct: 266 QWDKIETFKDYGNQDRI 282


>gi|163850387|ref|YP_001638430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens PA1]
 gi|163661992|gb|ABY29359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens PA1]
          Length = 296

 Score =  152 bits (384), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A  R L  E + RILG  +F+ +   L  +T  PRP+TE +V++AL   LP  E+   +
Sbjct: 67  QAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--EREQPL 123

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTG+G + +ALL E P   G+G+D S  AL +A+ NA  NGV++R   L   W  
Sbjct: 124 RLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLD 183

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--- 216
           +++G FD+IVSNPPYI + ++  L  EVR  DP+ +LDGG DGL  YR I   V+R    
Sbjct: 184 ALKGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGL 243

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L+  G   +EIGY+Q   + R+ +      +   +D  GNDRV+
Sbjct: 244 LSAQGALVLEIGYDQANALTRLAQEAGFEDIGVGRDLAGNDRVV 287


>gi|117926779|ref|YP_867396.1| HemK family modification methylase [Magnetococcus sp. MC-1]
 gi|117610535|gb|ABK45990.1| [protein release factor]-glutamine N5-methyltransferase
           [Magnetococcus sp. MC-1]
          Length = 289

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 139/263 (52%), Gaps = 8/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D    L     L    + +DPD  L  D+ QR+     I R    E +  I+G + F + 
Sbjct: 31  DGELLLAHTLTLRRLDLFLDPDRPLSPDELQRY--KAFIKRRAAREPVAYIVGKKPFLHW 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            LT+++    PRPETE LV +A  F     ++R    ILD+GTG+GA+ LALL      +
Sbjct: 89  ELTVTAGVLIPRPETEHLVQAAQDFF--NQQQRAPHTILDIGTGSGAILLALLDHFNEAQ 146

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
           G+G+DIS  AL  A+ N     ++ R   L S +   +  E  FD+I+SNPPYI S ++ 
Sbjct: 147 GIGIDISKAALACAQHNGEQLNLNNRAQWLYSHFCDDLPHESRFDLILSNPPYINSDVIP 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  ++PR++LDGG+DG+  Y+ I       LN  GL  VEIG++Q   V  + + 
Sbjct: 207 TLEAEVNQWEPRLALDGGVDGMQAYQQIIPAAVARLNPGGLLGVEIGHDQGPRVAALMQQ 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V   KDY  +DRV+L  R
Sbjct: 267 HGLQQVVVHKDYAQHDRVVLGHR 289


>gi|254510882|ref|ZP_05122949.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium KLH11]
 gi|221534593|gb|EEE37581.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium KLH11]
          Length = 285

 Score =  152 bits (384), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 137/257 (53%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   L     + + +V ++ P+ +  D    +     +R+++    H +LG R+FY  
Sbjct: 28  RDARVLLAHAARIEASRVTLIAPEELPVDIAERYDQLISLRAIRVPVSH-LLGEREFYGR 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  +S D  +PRPETE L+++AL+      E  D   +LDLG G+G + + LL E     
Sbjct: 87  RFKVSRDVLDPRPETEALIEAALS------EPFD--HVLDLGVGSGCILITLLAERASAA 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVGVD+S  A   A +NAV + V  R +  QSDWF ++EG FD+IVSNPPYI +  +  L
Sbjct: 139 GVGVDLSESACLQASANAVQHQVQGRVEIRQSDWFENIEGQFDLIVSNPPYISADEMQEL 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ +PRI+L    DGL  YR IA      L   G   VEIG  Q   V  +F++  
Sbjct: 199 SPEVREHEPRIALTDEGDGLDAYRRIAAAAPDFLTPGGRILVEIGPTQGAYVSALFDAAG 258

Query: 244 LFLVNAFKDYGGNDRVL 260
           L       D  G DRV+
Sbjct: 259 LTGTQVIPDLDGRDRVV 275


>gi|157804238|ref|YP_001492787.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str.
           McKiel]
 gi|157785501|gb|ABV74002.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str.
           McKiel]
          Length = 323

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 145/277 (52%), Gaps = 25/277 (9%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V       +++  D  L+  +       + R LKHE I  I+G ++FY+    ++ 
Sbjct: 31  LLQHVINTPLQYLLIKLDEQLNQSEIEAFEKLLERRLKHEPIAYIIGVKEFYSREFIVNK 90

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDV-----------------------VRILDLGT 106
               PR +TELLVD  +A  + R   R+                        ++IL+LGT
Sbjct: 91  HVLIPRGDTELLVDIVVAL-VKRCHYRESRNPVNHYMDTCLRGYDTRLQTNNIKILELGT 149

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165
           G+G + ++LL E P    +  DIS  A+E+A++NA+ + V++    + S+WF ++E   F
Sbjct: 150 GSGCIAISLLCELPNANVIATDISLDAIEVARNNALKHHVTDHIQIIHSNWFENIENQKF 209

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D IVSNPPYI +     + +E  +++P ++L    +GL  Y+TIA+   + L ++G  ++
Sbjct: 210 DFIVSNPPYISNTEKSEMAIETINYEPHLALFAEENGLQSYKTIAENAKKFLKQNGKLAL 269

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           EIG+ QK  V++IF  +   L N +KD  G  RV+LF
Sbjct: 270 EIGFKQKETVIQIFLDQGYNLENVYKDLQGYSRVILF 306


>gi|218528947|ref|YP_002419763.1| modification methylase, HemK family [Methylobacterium
           chloromethanicum CM4]
 gi|218521250|gb|ACK81835.1| modification methylase, HemK family [Methylobacterium
           chloromethanicum CM4]
          Length = 296

 Score =  152 bits (383), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/224 (41%), Positives = 133/224 (59%), Gaps = 6/224 (2%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A  R L  E + RILG  +F+ +   L  +T  PRP+TE +V++AL   LP  E+   +
Sbjct: 67  QAAERRLAGEPVARILGAWEFWGLPFALGPETLVPRPDTESVVETALRL-LP--ERERPL 123

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTG+G + +ALL E P   G+G+D S  AL +A+ NA  NGV++R   L   W  
Sbjct: 124 RLIDLGTGSGCILVALLHERPGALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLD 183

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--- 216
           ++EG FD+IVSNPPYI + ++  L  EVR  DP+ +LDGG DGL  YR I   V+R    
Sbjct: 184 ALEGPFDLIVSNPPYIAAPVIATLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGL 243

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L+  G   +EIGY+Q   + R+ +      +   +D  GNDRV+
Sbjct: 244 LSVQGALVLEIGYDQANALTRLAQEAGFEDIAVGRDLAGNDRVV 287


>gi|319776410|ref|YP_004138898.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3047]
 gi|329123574|ref|ZP_08252136.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116]
 gi|317451001|emb|CBY87231.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3047]
 gi|327470316|gb|EGF15776.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116]
          Length = 292

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/265 (36%), Positives = 149/265 (56%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPFFK 123
            +S  T  PRP+TE+LV+ AL  +L ++E+      ILDLGTGTGA+ LAL  E +P  +
Sbjct: 86  NVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFCILDLGTGTGAIALALASELAPICQ 145

Query: 124 G-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+    + +A+SN   N ++ +F  LQS WF ++ G FD+IVSNPPYI+
Sbjct: 146 KQHIPLEIIGVDLMPDVVALAQSNTERNQLNVQF--LQSCWFDNITGKFDLIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +V  F+P  +L    +G +  R I +    +LN +G+  +E G+ Q   V 
Sbjct: 204 AQDEHLHQGDV-SFEPLSALVANDEGYADLRHIIELAPSYLNSNGVLLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF+     +V   +DYG N+RV L
Sbjct: 263 SIFQENHWEMVETVRDYGDNERVTL 287


>gi|83310718|ref|YP_420982.1| methylase of polypeptide chain release factor [Magnetospirillum
           magneticum AMB-1]
 gi|82945559|dbj|BAE50423.1| Methylase of polypeptide chain release factor [Magnetospirillum
           magneticum AMB-1]
          Length = 283

 Score =  151 bits (382), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V G+   ++     + L   +   L   + R    E +  ILG R F+ +  
Sbjct: 26  DARLLVAEVLGVEMRRLPASHHAELTGDEAARLAALLERRAAREPMSHILGRRGFWTLEF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++DT +PRP+TE L+++ L     R   R   R+LD GTGTG + L LL E     G+
Sbjct: 86  AVTADTLDPRPDTETLIEAVLDALEDRGRPR---RLLDFGTGTGCILLTLLSELGHATGL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL +A  NA++ G++ R +    DW   + G FDVIVSNPPYI    +D L  
Sbjct: 143 GIDASPAALAVAGRNALSLGLAPRAEFRLGDWGEGLNGQFDVIVSNPPYIPDAEIDGLEP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV  ++PR +L GG DGL  YR +   ++R L   G+ ++E+G  Q VDV  +  +  L 
Sbjct: 203 EVARYEPRSALAGGSDGLECYRRLIPHMARLLAPGGIAALEVGAGQAVDVCALLAAAGLA 262

Query: 246 LVNAFKDYGGNDRVLLFCR 264
             +  +D GG +R ++  R
Sbjct: 263 GASVRRDLGGIERCVIVRR 281


>gi|297181250|gb|ADI17444.1| methylase of polypeptide chain release factors [uncultured
           Rhodospirillales bacterium HF0070_31K06]
          Length = 211

 Score =  151 bits (381), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 3/211 (1%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I G R+F ++R  +++D  +PRP++E+L+++ALA  LP     +   +LDLGTGTG 
Sbjct: 1   MSHITGSREFRSLRFEVTADVLDPRPDSEVLIEAALAL-LP--ATGEPFNVLDLGTGTGC 57

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + LA+L E P   G+GVD+S  AL +A+ NA   G++ER    + DW + + G FD+++S
Sbjct: 58  LLLAVLNERPAATGIGVDLSEAALAVARRNAWKLGLAERAQFRRGDWSNGLGGTFDLVLS 117

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +D L  EV   +PR++LDGG DGL  YR IA    + L   G   VE G  
Sbjct: 118 NPPYIPSAEIDQLEPEVACHEPRLALDGGADGLDAYRAIAQRTPQLLANKGALIVEFGTG 177

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Q   V  IF    L       D  G  R  +
Sbjct: 178 QAEAVCAIFAQHGLAEARLECDLAGRPRCFI 208


>gi|159044281|ref|YP_001533075.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
 gi|157912041|gb|ABV93474.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
          Length = 274

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 127/225 (56%), Gaps = 8/225 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           + L +A+      + + +I+G R F+     ++ D  +PRP+TE LV+ ALA        
Sbjct: 53  YTLEDAVKARAARQPVSQIIGRRAFFKHDFEVTPDVLDPRPDTETLVEVALAHPF----- 107

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D V  LD+G+G+G + L+LL E P   G+G+DIS  AL++A+ NA   G++ R    +S
Sbjct: 108 -DTV--LDIGSGSGCILLSLLAERPEATGLGIDISAPALDVARRNADRLGLAGRARFRRS 164

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           DW + V+  FD+IVSNPPYI++     L  E+RD++PR +L+ G DGL  YR IA    R
Sbjct: 165 DWLAEVDEQFDLIVSNPPYIDAATYATLAPELRDWEPRGALEAGADGLDAYRVIARDAPR 224

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            L   G   +EIG++Q   V  +  +     +   +D  G DRV+
Sbjct: 225 VLAPGGTLCLEIGHDQGRSVPALLAASGWRQITVQRDLIGKDRVV 269


>gi|188580161|ref|YP_001923606.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium populi BJ001]
 gi|179343659|gb|ACB79071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium populi BJ001]
          Length = 296

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/226 (41%), Positives = 136/226 (60%), Gaps = 6/226 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A  R L  E + RILG  +F+ +   LS DT  PRP+TE +V++AL    P  E++ 
Sbjct: 65  LGRAAARRLAGEPVARILGAWEFWGLPFALSPDTLVPRPDTESVVEAALGL-FPERERK- 122

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R++DLGTG+G + +ALL E P   G+G+D +  AL +A++NA  NGV++R   L   W
Sbjct: 123 -LRLIDLGTGSGCILVALLHERPRAYGIGLDRAQGALAVARNNAAANGVADRASFLCGSW 181

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216
             ++ G FD+IVSNPPYI + ++  L  EVR  DPR +LDGG DGL  YR I  G++R  
Sbjct: 182 LDALSGPFDLIVSNPPYIAAPVIATLEPEVRLHDPRAALDGGDDGLDAYRAILAGLARRP 241

Query: 217 --LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             L+  G   +EIGY+Q   +  + ++     V   +D  GNDRV+
Sbjct: 242 GLLSAQGALVLEIGYDQGPALTDLAQAMGFADVRVGRDLAGNDRVV 287


>gi|145637545|ref|ZP_01793202.1| HemK [Haemophilus influenzae PittHH]
 gi|145269231|gb|EDK09177.1| HemK [Haemophilus influenzae PittHH]
          Length = 292

 Score =  150 bits (380), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 12/261 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L +S 
Sbjct: 30  LLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVSK 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE-SPF------ 121
            T  PRP+TE LV+ AL  +L ++E+      ILDLGTGTGA+ LAL  E +P       
Sbjct: 90  STLIPRPDTESLVEKALQIALEKLEENPPHFHILDLGTGTGAIALALASELAPICQKRHI 149

Query: 122 -FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +GVD+    + +A+SNA  N ++ +F  LQS WF ++ G FD+IVSNPPYI++   
Sbjct: 150 PLEIIGVDLMPDVVALAQSNAERNQLNVQF--LQSSWFDNITGKFDLIVSNPPYIDAQDE 207

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +V  F+P  +L     G +  R I +  S +LN +G+  +E G+ Q   V  IF 
Sbjct: 208 HLHQGDV-SFEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQGEKVRSIFL 266

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                +V    DYG N+RV L
Sbjct: 267 ENYWEMVETVCDYGDNERVTL 287


>gi|294085499|ref|YP_003552259.1| methylase of polypeptide chain release factor [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292665074|gb|ADE40175.1| Methylase of polypeptide chain release factor [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 289

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 134/235 (57%), Gaps = 4/235 (1%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D ++  L   + R +  E + RI GWR+F+++R  LSS T +PRP++E++V +A+A +  
Sbjct: 51  DMEKALLETLVARRIAREPVSRIRGWREFWSLRFALSSATLDPRPDSEIIVATAIAAAKA 110

Query: 92  R--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R  +     +++LDLGTG+G + LA L E P   G+G+DIS  AL  A++NA   G++E+
Sbjct: 111 RSIVNPAKQLKLLDLGTGSGCLLLACLSELPDAVGLGLDISEDALATARNNATALGLAEQ 170

Query: 150 FDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               Q  +   +   G FD+I+ NPPYI +  +  L  EV  ++P  +LDGG DGL  +R
Sbjct: 171 SRFYQHSFMDEMSQFGSFDIILCNPPYIPAAEITALEPEVARYEPMRALDGGADGLDCWR 230

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +   V   L   G   VEIG  Q+ DV+++ E   +  V   KD  G  R L+F
Sbjct: 231 GLMTVVPSCLAAGGCLVVEIGAGQEDDVIQLAEMANMTCVEMHKDLAGITRCLMF 285


>gi|154246563|ref|YP_001417521.1| HemK family modification methylase [Xanthobacter autotrophicus Py2]
 gi|154160648|gb|ABS67864.1| modification methylase, HemK family [Xanthobacter autotrophicus
           Py2]
          Length = 286

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 141/260 (54%), Gaps = 4/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +  G +   +++  D+ +             R    E + RI G R+F+++ L
Sbjct: 29  DARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGRREFWSLDL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS DT  PRP+TE LV++ALA +LP  ++   + ILDLGTGTGA+  ALL E P   G+
Sbjct: 89  HLSPDTLVPRPDTETLVEAALA-ALP--DRTAPLSILDLGTGTGAILAALLVECPNATGI 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VD S  A   A++N   NG++ R   +  DW +++ G FD++VSNPPYI S  +  L  
Sbjct: 146 AVDRSEGAALTARANLARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLPA 205

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DP ++L+ G DGL  Y  IA  + R + + G+  +E+G  Q+  V  +  +  L 
Sbjct: 206 EVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRGGIAVLELGEGQEAAVAALVAAAGLE 265

Query: 246 LVN-AFKDYGGNDRVLLFCR 264
           +   A +D  G  R LL  R
Sbjct: 266 VAGPARRDLSGIPRALLARR 285


>gi|149914650|ref|ZP_01903180.1| modification methylase, HemK family, putative [Roseobacter sp.
           AzwK-3b]
 gi|149811443|gb|EDM71278.1| modification methylase, HemK family, putative [Roseobacter sp.
           AzwK-3b]
          Length = 278

 Score =  150 bits (379), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/212 (41%), Positives = 122/212 (57%), Gaps = 9/212 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG+R+FY  R  + +   +PRPETE LV+ ALA +  R+        LDLGTG+
Sbjct: 70  EPMAHLLGYREFYGRRFAVDARVLDPRPETETLVERALAVAFSRV--------LDLGTGS 121

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + L+LL E P   GVGVD+S  ALE+A+ NA    +S R + L SDWF++V G FD+I
Sbjct: 122 GCILLSLLAERPDATGVGVDLSEDALEVARRNAARLDLSARCEFLVSDWFAAVRGTFDLI 181

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI +  +  L  E++ ++PR++L     GLS YR I       L + G   VEIG
Sbjct: 182 VSNPPYIAADEMAGLARELQ-YEPRMALTDEGCGLSAYRAIVAEAGACLVEGGRLIVEIG 240

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + Q  DV  +  +     V    D  G DRV+
Sbjct: 241 WRQGADVADLMRAGGFAEVCVRPDLDGRDRVV 272


>gi|182677818|ref|YP_001831964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633701|gb|ACB94475.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 306

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 139/258 (53%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC   G+    +I DP   + D+ +  L     R L  E + RI+G R+F+++ L
Sbjct: 49  DARLLLCAALGIDHAGLIRDPAEPIGDKAKV-LDAFCRRRLAREPVSRIIGEREFWSLDL 107

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            L     +PRP+TE L+D      L  + KR     R+LDLGTG+GA+  ALL E P   
Sbjct: 108 KLDPAVLDPRPDTETLID----LVLREVGKRACPPQRVLDLGTGSGAILAALLTEWPEAF 163

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVGVD+S +   IA  N    G+ +R       W +++ G FD+IVSNPPYI    +D L
Sbjct: 164 GVGVDLSPRTCAIAAGNFARLGLGDRAAVFCGRWSAALSGRFDLIVSNPPYIVLDEIDTL 223

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV  +DPR++LDGG DG   YR +   ++  L + GL ++E G  Q   +  +  + +
Sbjct: 224 APEVSLYDPRLALDGGPDGFDAYRALLPPLASLLAEGGLVALECGAGQSPILQDLLRAAQ 283

Query: 244 LFLVNAFKDYGGNDRVLL 261
           L  ++   D  G++RV+L
Sbjct: 284 LEPMSIGLDLSGHERVVL 301


>gi|77920282|ref|YP_358097.1| putative protoporphyrinogen oxidase [Pelobacter carbinolicus DSM
           2380]
 gi|77546365|gb|ABA89927.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter
           carbinolicus DSM 2380]
          Length = 287

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 143/258 (55%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L    G+    + ++ D  L++ +       +V+  + E +  ILG  +F+++ 
Sbjct: 28  RDAELLLGASLGMDRVGLYLNFDRPLEESELTAYRALVVKRARREPLQYILGETEFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++S     PRP+TE+LV+ AL  +       +  R+LD+GTG+GA+ +AL  E    + 
Sbjct: 88  LSVSPAVLIPRPDTEVLVEEALRVA-------NGSRVLDVGTGSGAIAIALAHELADAQV 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V +DI  +AL +A  NA  NGV +R   L+ D     EG FD+IVSNPPYI +  +D L 
Sbjct: 141 VALDICPQALAVAADNARRNGVDDRVRFLERDLAQLPEGPFDLIVSNPPYIPAADLDGLM 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRDF+PR +L+GG DGL  YR +A      L   G   VE+G +Q   V ++F+    
Sbjct: 201 PEVRDFEPRQALNGGQDGLDPYRLLAAQADTCLVPGGWLLVEVGIDQAAAVRQLFDDAG- 259

Query: 245 FLVNAF--KDYGGNDRVL 260
            LV+ F   DYGG  RV+
Sbjct: 260 -LVDGFVRDDYGGVPRVV 276


>gi|163793918|ref|ZP_02187892.1| Methylase of polypeptide chain release factor [alpha
           proteobacterium BAL199]
 gi|159181029|gb|EDP65546.1| Methylase of polypeptide chain release factor [alpha
           proteobacterium BAL199]
          Length = 294

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 125/222 (56%), Gaps = 5/222 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVR 100
           + R L  E + RILG R F+ + L +  DT +PRP+TE L+++A+A F+    ++    R
Sbjct: 59  LARRLTREPVSRILGRRAFWTLDLIVGPDTLDPRPDTETLIEAAIAAFA----DREPPNR 114

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTGTG + LA L   P   G+G+D S  A+EIA++NAV N +S R +    DW   
Sbjct: 115 IIDLGTGTGCLLLAALSAFPAATGLGIDKSKGAVEIARTNAVRNELSARAEFQTIDWDEL 174

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +   D+I+SNPPYIE   +  L  EV  FDPR +L GG DGL  Y ++A  + R +   
Sbjct: 175 PQDRGDLILSNPPYIEEATLSALAPEVVQFDPRDALSGGADGLEAYDSLAGVLPRLMAPQ 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           G+  +E+G  Q+  V  +       +    KD G  +R L+ 
Sbjct: 235 GIAILELGAGQRSAVETLMIGVGFAVQEVRKDLGNIERALVL 276


>gi|255657439|ref|ZP_05402848.1| protein methyltransferase [Clostridium difficile QCD-23m63]
 gi|296449036|ref|ZP_06890826.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP08]
 gi|296879859|ref|ZP_06903832.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP07]
 gi|296262129|gb|EFH08934.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP08]
 gi|296429148|gb|EFH15022.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP07]
          Length = 282

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 142/259 (54%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  +  
Sbjct: 24  DTELLLQKTLGVDRLYIHLNLNKELTEEQKTEFIGFAEERLNGRPIAYIVENREFMGLDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE LV+  +       EK+DV  ILD+GTG+GA+ ++L K     K +
Sbjct: 84  FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182
             DIS  ALEIAK NA+TN V E+   + SD F+++      FD+IVSNPPYI+   ++ 
Sbjct: 140 SFDISEIALEIAKKNAITNEVDEKIKYINSDLFTAISNSNIKFDIIVSNPPYIKKQDIET 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P  +L+GG DGL  YR I +   ++LNK G+ + E+G+NQ  DV+ I +S 
Sbjct: 200 LHTQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKFGILAYEVGHNQAEDVINIMKSN 259

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KD  G DRV++
Sbjct: 260 GYKKIYTKKDIQGIDRVVI 278


>gi|27375330|ref|NP_766859.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110]
 gi|27348466|dbj|BAC45484.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110]
          Length = 297

 Score =  150 bits (378), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 124/219 (56%), Gaps = 4/219 (1%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRIL 102
           R +  E + RILG R+F+ +   LS  T  PRP+TE +V+ AL   L R +K     RI 
Sbjct: 74  RRIAGEPVARILGTREFWGLPFRLSDATLVPRPDTETVVERAL--ELFREQKATQQPRIA 131

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+GA+ LALL + P   GVG D+S  ALE A+ NAVT G+++R   +   + +++ 
Sbjct: 132 DIGTGSGAILLALLHDIPGAFGVGTDLSLNALETARGNAVTLGLADRSAFVACSYLAALR 191

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD+IVSNPPYI S  +  L LEVR+ DP ++LDGG DG   YR +    +  L   G 
Sbjct: 192 GPFDLIVSNPPYIPSAEIPKLSLEVREHDPHLALDGGNDGYDAYRALIPQAAERLAPGGA 251

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVL 260
             VE G  Q  ++  +  +  L +    K D  G  R +
Sbjct: 252 LIVEAGQGQARNIETLLTAAALVVDRPPKADLAGIPRAV 290


>gi|302671178|ref|YP_003831138.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316]
 gi|302395651|gb|ADL34556.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316]
          Length = 287

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 134/246 (54%), Gaps = 7/246 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  V G     ++  PD  + D +R    + I R   HE +  ILG  +F 
Sbjct: 23  EAKLDARLLLEYVCGTDHSTLLAHPDKEVTDEERDKYLSMIDRRAAHEPVAYILGTWNFM 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++SD   P  +TE+LV+ AL          D +R+LDL TG+G + L+LL  +  
Sbjct: 83  GLDFKVNSDVLIPEQDTEILVEEALR------NLEDGMRVLDLCTGSGCIALSLLNYTNE 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
            + V  DIS KAL +A  NA   G+S+R + +++D F     G FD+IVSNPPYI S ++
Sbjct: 137 TRAVCTDISDKALAVAGMNAERLGLSDRTEFVRTDLFPEESVGKFDLIVSNPPYIASKVI 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVRD++PR++LDG  DGL  YR I +   + L   G   +EIGY+Q   V  + E
Sbjct: 197 DTLAPEVRDYEPRLALDGSEDGLVFYRRIIEETPKFLYSSGYLLLEIGYDQGQAVKEMLE 256

Query: 241 SRKLFL 246
            +K  +
Sbjct: 257 DKKYIM 262


>gi|260426432|ref|ZP_05780411.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Citreicella sp. SE45]
 gi|260420924|gb|EEX14175.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Citreicella sp. SE45]
          Length = 282

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 128/262 (48%), Gaps = 13/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A RD+   L  V G++  ++ +V PD V       + T  I R    E +  + G R+FY
Sbjct: 23  AARDARRLLAHVLGVAPGRLTLVLPDPVGAGAAGRYET-LIARRAAREPVSHLTGRREFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++SD  +PRPETE LV  AL+            R+LDLGTGTG + L LL E   
Sbjct: 82  GRAFHVTSDVLDPRPETETLVAEALSAPF--------ARVLDLGTGTGCILLTLLAERAT 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
             G+G D+S  AL +A  N    G+  R    Q  WF ++    G FD+IVSNPPYI   
Sbjct: 134 ATGIGTDLSEAALAVATRNRDALGLDGRATLGQGSWFEALPEGSGPFDLIVSNPPYIALD 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  EVRD +P ++L  G DGL+ YR I      HL   G   VEIG  Q   V  +
Sbjct: 194 EMAGLSPEVRDHEPHMALTDGGDGLAAYRAITRDAPAHLAPGGRLMVEIGPTQGPAVAAL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                L  V   +D  G DRV+
Sbjct: 254 MTGAGLADVTVLQDLDGRDRVV 275


>gi|217978069|ref|YP_002362216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocella silvestris BL2]
 gi|217503445|gb|ACK50854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocella silvestris BL2]
          Length = 296

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 129/260 (49%), Gaps = 6/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC   GL    ++ DP + L  R    L     R L  E   RILG R+F+  R 
Sbjct: 35  DARLLLCAALGLDHAGLLRDPGAPLGARGAQALERMAARRLAREPTSRILGAREFWGARF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L     +PRP+TE LV+  L       E     RILDLG G+GA+  ALL   P   GV
Sbjct: 95  HLGPAALDPRPDTETLVEVVL--DAVGAETGRAWRILDLGVGSGALLCALLASLPNAFGV 152

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
           GVD++  A  IA  N    G+  R   + +DW + +E      FD+IVSNPPYI    + 
Sbjct: 153 GVDLAPAACAIADRNLAAQGLQGRGKLICADWAAPLEARSAARFDIIVSNPPYISRGDIA 212

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR +DP ++LDGG DGL  YR +    +R L  +G  ++EIG  Q  DV  +   
Sbjct: 213 RLEPEVRIYDPLLALDGGEDGLDAYRAVIPTAARLLAPEGFVALEIGQGQGKDVDALLRD 272

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                 N   D GG +R++L
Sbjct: 273 ASFSARNFRLDLGGVERIIL 292


>gi|220930733|ref|YP_002507642.1| modification methylase, HemK family [Clostridium cellulolyticum
           H10]
 gi|220001061|gb|ACL77662.1| modification methylase, HemK family [Clostridium cellulolyticum
           H10]
          Length = 285

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 143/260 (55%), Gaps = 4/260 (1%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + ++   LC+V       +    D  L   ++  L + +V+   +  +  I+G  +F ++
Sbjct: 23  VHEAGVMLCKVLKCGRTYLYSHGDRELSIDEKAVLDHMLVQRTGNIPLQYIVGDTEFMSL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  ++     PR +TELLV+  +   L + +     ++LD+ TG+G + +++    P   
Sbjct: 83  RFLVTPAVLIPRQDTELLVEKTIDL-LNQGKTGTNKKVLDMCTGSGCIAVSIAYFCPECS 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
            V  D+S KAL++AK+N+  NGV  R +    D F +++G   FD+IVSNPPYIE+ I+ 
Sbjct: 142 IVACDVSQKALDVAKANSELNGVQNRVELCCGDLFDAIKGGQKFDIIVSNPPYIETDIIA 201

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++LDGG DGL  YR I       LN++G  + EIGYNQ   V  + + 
Sbjct: 202 GLQKEVRSYEPGLALDGGADGLVFYRRIISSAPERLNRNGWLAFEIGYNQGEKVSALMK- 260

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +  FKDYGGNDRV++
Sbjct: 261 ESFVDIQIFKDYGGNDRVVI 280


>gi|46202828|ref|ZP_00208676.1| COG2890: Methylase of polypeptide chain release factors
           [Magnetospirillum magnetotacticum MS-1]
          Length = 313

 Score =  149 bits (377), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/199 (41%), Positives = 120/199 (60%), Gaps = 6/199 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A  R L  E + RILG  +F+ +  +L  +T  PRP+TE +V++AL    P  E+  
Sbjct: 65  LGRAAERRLAGEPVARILGAWEFWGLPFSLGPETLVPRPDTESVVETALRL-FP--ERDR 121

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R++DLGTG+G + +ALL E     G+G+D +  AL +A++NA  NGV  R   L+  W
Sbjct: 122 PLRLVDLGTGSGCILVALLHERLRAFGLGLDRAEGALRVARANAERNGVGARAAFLRGSW 181

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216
             ++ G FD+IVSNPPYI + ++  L  EVR+ DP  +LDGG DGL  YR I  G++R  
Sbjct: 182 LDALVGPFDLIVSNPPYIAAPVIATLDTEVREHDPMAALDGGPDGLDAYRAILLGIARRP 241

Query: 217 --LNKDGLCSVEIGYNQKV 233
             L+  G   +EIGY+Q  
Sbjct: 242 DLLSPGGALVLEIGYDQAA 260


>gi|190151398|ref|YP_001969923.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|189916529|gb|ACE62781.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
          Length = 314

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG +DF+++ L
Sbjct: 53  DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDFWSLPL 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 113 KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 172

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 173 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDENLQ 231

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +IF+  +
Sbjct: 232 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFQQYQ 290

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + +F+DYGGNDR+    R
Sbjct: 291 WDEIESFQDYGGNDRLTKAVR 311


>gi|146337702|ref|YP_001202750.1| putative methyltransferase hemK modifies release factors RF-1 and
           RF-2 [Bradyrhizobium sp. ORS278]
 gi|146190508|emb|CAL74507.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [Bradyrhizobium sp. ORS278]
          Length = 295

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 124/222 (55%), Gaps = 18/222 (8%)

Query: 31  DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86
           DD QR    +A+V R L  E + RILG ++F+ + L LS+DT  PRP+TE +V+ AL   
Sbjct: 59  DDAQRL---DALVQRRLAGEPVARILGHKEFWGLELRLSADTLVPRPDTETVVELALDHL 115

Query: 87  ----AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
               A + P       +RI DLGTG+GA+ LALL E P   GVG DIS  AL  A+ NA 
Sbjct: 116 SAGGALTRP-------LRIGDLGTGSGAILLALLSELPRASGVGTDISIAALTTARENAR 168

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+++R   +   + +++   FD+IVSNPPYI S  +  L  EV   DP  +LDGG DG
Sbjct: 169 ALGLNDRAAFVACSYATALAPPFDLIVSNPPYIPSADIAGLATEVHAHDPLRALDGGGDG 228

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L+ YRT+    +  L   G   VE+G  Q  DV  +     L
Sbjct: 229 LAAYRTLIPQAALLLQTGGAVIVEVGQGQSGDVAGLMTEAGL 270


>gi|303240124|ref|ZP_07326645.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetivibrio cellulolyticus CD2]
 gi|302592393|gb|EFL62120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetivibrio cellulolyticus CD2]
          Length = 296

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 147/263 (55%), Gaps = 14/263 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + + LC V G     +    D +L++ Q      AI R +  E +  I G ++F ++   
Sbjct: 41  AGAILCHVLGCDKAYLYSHDDYILNNSQFNSFLEAIKRRINGEPLQYITGSQEFMSLDFI 100

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S D   PR +TE+LV+S + F+      +  + ILD+GTG+G + ++L       +   
Sbjct: 101 VSPDVLIPRQDTEILVESVIQFA----SGKGNIDILDVGTGSGCIAISLAYFIKNSRVTA 156

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
           VDIS  ALE+A+ NA   GV +R   ++S+ F +V  G FD+IVSNPPYI    ++ L  
Sbjct: 157 VDISKGALEMARKNAQKCGVEDRITFIESNLFDNVTSGDFDIIVSNPPYIPVQDIETLEK 216

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FES 241
           +V+DF+PR +LDGG DGL  YR I     R+L  +GL + E+GY+Q  +V++I    F++
Sbjct: 217 QVKDFEPRSALDGGCDGLDFYRRITKDSIRYLKPNGLLAFEVGYDQSQEVLKIMKDSFDN 276

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
            K+      +D  G +RV++  R
Sbjct: 277 LKI-----ERDLAGIERVVMGIR 294


>gi|307262577|ref|ZP_07544208.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306872075|gb|EFN03788.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 290

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG +DF+++ L
Sbjct: 29  DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDENLQ 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +IF+  +
Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFQQYQ 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + +F+DYGGNDR+    R
Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287


>gi|145634874|ref|ZP_01790581.1| HemK [Haemophilus influenzae PittAA]
 gi|145267740|gb|EDK07737.1| HemK [Haemophilus influenzae PittAA]
          Length = 292

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 143/265 (53%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG    Q++   D+ +D++ R  LT  + R L  E I  ILG ++F+++ L
Sbjct: 26  DALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLNGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE------ 118
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E      
Sbjct: 86  NVSKGTLIPRPDTEILVEKALQIALVKLEENPPHFRILDLGTGTGAIALALASELSSICQ 145

Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + +GVD+    + +A+SNA  N ++  F  LQS WF ++ G FD+I SNPPYI+
Sbjct: 146 KRQISLEIIGVDLMPDVVALAQSNAERNQLNVEF--LQSRWFENITGQFDLIASNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q   V 
Sbjct: 204 AQDEHLRQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNSNGALLLEHGWQQGEKVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            IF      +V   +DYG N+RV L
Sbjct: 263 SIFLENHWEIVETVRDYGDNERVTL 287


>gi|326202287|ref|ZP_08192156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium papyrosolvens DSM 2782]
 gi|325987405|gb|EGD48232.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium papyrosolvens DSM 2782]
          Length = 284

 Score =  149 bits (375), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++++   LC+V       +    D  L   +R  L N + +  K+  +  I+G  +F ++
Sbjct: 23  VQEAGVMLCQVLNCGRAYLYAHGDRELSTDERAVLDNMLAQRAKNTPLQYIIGDTEFMSL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +  ++     PR +TE+LV+  +   L +      +++LD+ TG+G + +++    P   
Sbjct: 83  KFIVTPAVLIPRQDTEVLVEKVI--ELAKKSSNAGLKVLDMCTGSGCIAVSIAHFCPESS 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
            V  DIS +A+++AK+N+  NGV  R +    D F +++G   FD IVSNPPYIE+ I+ 
Sbjct: 141 IVACDISEEAIKVAKANSDLNGVQNRVEFFCGDLFEALKGSYKFDFIVSNPPYIETEIII 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++LDGG DGL  Y+ I      +LN  G  + EIG+NQ   V  + E 
Sbjct: 201 GLQKEVRSYEPELALDGGADGLDFYKIITVKAPEYLNNLGWLAFEIGFNQGERVSALME- 259

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   KDYGGNDRV++
Sbjct: 260 ESFINIQVIKDYGGNDRVVI 279


>gi|67459736|ref|YP_247360.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia felis URRWXCal2]
 gi|75535874|sp|Q4UJU4|HEMK_RICFE RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|67005269|gb|AAY62195.1| Methylase of polypeptide chain release factors, tRNA
           (guanine-N(7)-)-methyltransferase [Rickettsia felis
           URRWXCal2]
          Length = 527

 Score =  149 bits (375), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 143/266 (53%), Gaps = 24/266 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I+G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEVEIEAFEKLLERRLKHEPIAYIIGIKEFYSREFIVNKHVLIPRADTEVL 102

Query: 82  VD---------------------SALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKE 118
           VD                     S +A S P    R  +  +IL+LGTG+G + ++LL E
Sbjct: 103 VDVCVHKSSLRATKRSVAISGILSKIASSTPMASSRNDEYTKILELGTGSGCIAISLLCE 162

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P  + V  DIS  A+E+A++NA+   V++R   + S+WF ++ +  FDVIVSNPPYI +
Sbjct: 163 LPNARVVATDISLDAIEVARNNALKYHVTDRIQIIHSNWFENLGKQKFDVIVSNPPYIST 222

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                + LE  + +P I+L    DGL  YR IA+   + L  +G   +EIG+ Q+  V +
Sbjct: 223 DEKPEMALETLNHEPYIALFAEEDGLQAYRIIAENAKKFLKPNGKIVLEIGFKQEEAVTQ 282

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           IF S    + + +KD  G+ RV+LF 
Sbjct: 283 IFLSNGYNIESVYKDLQGHSRVILFS 308


>gi|219870998|ref|YP_002475373.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Haemophilus parasuis SH0165]
 gi|219691202|gb|ACL32425.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Haemophilus parasuis SH0165]
          Length = 289

 Score =  148 bits (374), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 145/262 (55%), Gaps = 6/262 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++ L++ +   L   + R  K E +  ILG ++F
Sbjct: 24  LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           +++ L +S+ T  PRP+TE LV+ AL ++  R++    ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
              + +G+D    A+++A+ N    G    RF  LQSDWF +++   FD+IVSNPPYI+ 
Sbjct: 144 TKAEIIGIDKQPDAVQLAEKNRQKLGFENVRF--LQSDWFEALKNQRFDLIVSNPPYIDK 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +    +VR F+P  +L    +GLS  + I      +L  +G   +E G+ Q   V  
Sbjct: 202 DDENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQD 260

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           IF+  +   V  F+DYGGNDRV
Sbjct: 261 IFQQNQWNAVTTFQDYGGNDRV 282


>gi|113461091|ref|YP_719159.1| peptide release factor glutamine N(5)-methylase [Haemophilus somnus
           129PT]
 gi|112823134|gb|ABI25223.1| [protein release factor]-glutamine N5-methyltransferase
           [Haemophilus somnus 129PT]
          Length = 301

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 10/264 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   ++   +++L + +   LT  +VR  K E +  +LG  +F+ + L
Sbjct: 29  DANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEFWTLNL 88

Query: 66  TLSSDTFEPRPETELLVDSALA-FSLPRIEK---RDVVRILDLGTGTGAVCLAL---LKE 118
            ++  T  PRP+TE+LV+ AL    L +  K   +  +RILDLGTGTGA+ LAL   LK+
Sbjct: 89  QVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSSIRILDLGTGTGAIALALADELKK 148

Query: 119 S-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           S   F+  G+D+   A+++AK+NAV N ++E    LQS+WF  V G FD+IVSNPPYI++
Sbjct: 149 SGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNPPYIDA 207

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     G +  + I +    +L K G   VE G+ Q   V  
Sbjct: 208 EDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQGQKVRS 266

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
            F  +    V    DYGGN+R+ L
Sbjct: 267 FFAEKLWKQVETINDYGGNERITL 290


>gi|170717667|ref|YP_001784743.1| HemK family modification methylase [Haemophilus somnus 2336]
 gi|168825796|gb|ACA31167.1| modification methylase, HemK family [Haemophilus somnus 2336]
          Length = 301

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 146/264 (55%), Gaps = 10/264 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   ++   +++L + +   LT  +VR  K E +  +LG  +F+ + L
Sbjct: 29  DANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEFWTLNL 88

Query: 66  TLSSDTFEPRPETELLVDSALA-FSLPRIEK---RDVVRILDLGTGTGAVCLAL---LKE 118
            ++  T  PRP+TE+LV+ AL    L +  K   +  +RILDLGTGTGA+ LAL   LK+
Sbjct: 89  QVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSPIRILDLGTGTGAIALALADELKK 148

Query: 119 S-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           S   F+  G+D+   A+++AK+NAV N ++E    LQS+WF  V G FD+IVSNPPYI++
Sbjct: 149 SGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNPPYIDA 207

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     G +  + I +    +L K G   VE G+ Q   V  
Sbjct: 208 EDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQGQKVRS 266

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
            F  +    V    DYGGN+R+ L
Sbjct: 267 FFAEKLWKQVETINDYGGNERITL 290


>gi|126701108|ref|YP_001090005.1| protein methyltransferase [Clostridium difficile 630]
 gi|254977109|ref|ZP_05273581.1| protein methyltransferase [Clostridium difficile QCD-66c26]
 gi|255102694|ref|ZP_05331671.1| protein methyltransferase [Clostridium difficile QCD-63q42]
 gi|255308515|ref|ZP_05352686.1| protein methyltransferase [Clostridium difficile ATCC 43255]
 gi|255316189|ref|ZP_05357772.1| protein methyltransferase [Clostridium difficile QCD-76w55]
 gi|255518850|ref|ZP_05386526.1| protein methyltransferase [Clostridium difficile QCD-97b34]
 gi|255652029|ref|ZP_05398931.1| protein methyltransferase [Clostridium difficile QCD-37x79]
 gi|260685004|ref|YP_003216289.1| protein methyltransferase [Clostridium difficile CD196]
 gi|260688662|ref|YP_003219796.1| protein methyltransferase [Clostridium difficile R20291]
 gi|306521771|ref|ZP_07408118.1| protein methyltransferase [Clostridium difficile QCD-32g58]
 gi|115252545|emb|CAJ70388.1| Modification methylase HemK [Clostridium difficile]
 gi|260211167|emb|CBA66623.1| protein methyltransferase [Clostridium difficile CD196]
 gi|260214679|emb|CBE07316.1| protein methyltransferase [Clostridium difficile R20291]
          Length = 282

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 141/259 (54%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  +  
Sbjct: 24  DTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMGLDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE LV+  +       EK+DV  ILD+GTG+GA+ ++L K     K +
Sbjct: 84  FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182
             DIS  ALEIAK NA+ N V E+   + SD F+++      FD+IVSNPPYI+   ++ 
Sbjct: 140 SFDISETALEIAKKNAIINEVGEKIKYINSDLFTAISDSNIKFDIIVSNPPYIKKQDIET 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P  +L+GG DGL  YR I +   ++LNK G+ + E+G+NQ  DV+ I +S 
Sbjct: 200 LHKQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKCGILAYEVGHNQAEDVINIMKSN 259

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KD  G DRV++
Sbjct: 260 GYKKIYTKKDIQGIDRVVI 278


>gi|332161452|ref|YP_004298029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|318605429|emb|CBY26927.1| methylase of polypeptide chain release factors [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665682|gb|ADZ42326.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
          Length = 284

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 137/257 (53%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   +S L   Q   L     R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P F  
Sbjct: 82  LSVSSATLIPRPDTECLVEQALAH-LPATP----CRILDLGTGTGAIALALASERPDFAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVDI   A+ +A+ NA    ++   D LQS WF SV G F +IVSNPPYI++       
Sbjct: 137 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  +   
Sbjct: 196 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNSGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V  +KDYG NDRV L
Sbjct: 255 SAVMTYKDYGNNDRVTL 271


>gi|126736398|ref|ZP_01752140.1| modification methylase, HemK family protein [Roseobacter sp. CCS2]
 gi|126714219|gb|EBA11088.1| modification methylase, HemK family protein [Roseobacter sp. CCS2]
          Length = 288

 Score =  148 bits (373), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+       +G+++ ++ +     ++D  +      I R  + E +  + G R FY 
Sbjct: 26  AARDARKLFAFASGVAAGRLTLILPEPVNDAVKTRFDALIARRSRFEPVSHLTGTRAFYG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D  +PRPETE L+++AL        +    R+LDLGTG+G + + LL E+P  
Sbjct: 86  RDFEVTKDVLDPRPETETLIEAAL--------RDPFARVLDLGTGSGCILVTLLAENPKA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG D S  AL +A  NA  +GV +R   +QSDW ++++  FD+IV+NPPYI +  +  
Sbjct: 138 VGVGGDASAVALTVALRNAQRHGVDDRATFVQSDWMAAIKRRFDLIVANPPYIAADEMAG 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VR+++PR++L    DGLS YRTI       L   G    EIG  Q   V  +    
Sbjct: 198 LSRDVREWEPRMALTDEADGLSAYRTIIKQAGDALIPGGRLMCEIGSTQGHAVAELMIRA 257

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L  V    D  G DRV+
Sbjct: 258 GLRHVGVIPDLDGRDRVV 275


>gi|167855821|ref|ZP_02478573.1| HemK-like protein [Haemophilus parasuis 29755]
 gi|167853034|gb|EDS24296.1| HemK-like protein [Haemophilus parasuis 29755]
          Length = 416

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 144/261 (55%), Gaps = 4/261 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++ L++ +   L   + R  K E +  ILG ++F
Sbjct: 151 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 210

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           +++ L +S+ T  PRP+TE LV+ AL ++  R++    ++ILDLGTGTGA+ LAL  E  
Sbjct: 211 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 270

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +G+D    A+++A+ N    G  E    LQSDWF +++   FD+IVSNPPYI+  
Sbjct: 271 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 329

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I      +L  +G   +E G+ Q   V  I
Sbjct: 330 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 388

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
           F+  +   V  F+DYGGNDRV
Sbjct: 389 FQQNQWNAVTTFQDYGGNDRV 409


>gi|308271576|emb|CBX28184.1| Protein methyltransferase hemK [uncultured Desulfobacterium sp.]
          Length = 307

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 5/255 (1%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    G     + +  D  L+  +R    + I R +  E +  I+G ++F+++ L +S 
Sbjct: 47  LLAHTLGFKRIDLYLRHDQPLNVGERNLFKSLIRRRISKEPVAYIVGSKEFWSLELVVSK 106

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETE LV+ AL   L + +     RIL+LGTG+GA+ LA+  ++P  +    DI
Sbjct: 107 DVLIPRPETECLVEEAL-LVLDKDKVSAPKRILELGTGSGAIILAMATQNPDQQYFASDI 165

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186
           S  AL +A +NA   G+ E+ D     W S ++    LFD+I+SNPPYI    +  L  E
Sbjct: 166 SINALAVALNNARHLGLDEKIDLFCGSWVSPLKENNNLFDIIISNPPYIRRGDIKTLQPE 225

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +  F+P  +LDGG DGL+  + I     + LNK G   +EIGY+QK  V  I +    + 
Sbjct: 226 INRFEPINALDGGEDGLACIKHIIKNAHKFLNKSGTLLLEIGYDQKKAVDEIIKETGRYA 285

Query: 247 VNAF-KDYGGNDRVL 260
             +F KDY G DRV+
Sbjct: 286 QASFRKDYSGFDRVV 300


>gi|144897746|emb|CAM74610.1| modification methylase, HemK family [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 281

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +    G+   +++  P+ VL  +Q+  +     R    + I  ILG R F+ + L
Sbjct: 26  DARLLVAEALGVEPLRLVTHPEMVLTAQQQTAIEGMAARREDRQPISHILGRRGFWTLDL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124
            ++ DT +PRP+TE LV   L     R+  R   +RI+D GTG+G + LALL E P   G
Sbjct: 86  RVTPDTLDPRPDTETLVQGVL----DRVADRHAALRIVDFGTGSGCILLALLAELPNAHG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+D S  AL +A  NA  NG++ R +    DW   ++G FD+IVSNPPYI    +  L 
Sbjct: 142 LGIDQSAAALAVAAENAERNGLAGRAEFRHGDWGRGLDGPFDIIVSNPPYIPEADIAGLE 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV   +PR +L GG DGL  YR +A  ++R L   G+  +E+G  Q  DV  + ++  L
Sbjct: 202 PEVARHEPRSALVGGADGLDCYRALAPDIARLLAVGGITGLEVGAGQDSDVAALLKAAGL 261

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +    D  G+ R +   R
Sbjct: 262 RDLCVADDLAGHGRSVFAAR 281


>gi|330863232|emb|CBX73358.1| protein methyltransferase hemK [Yersinia enterocolitica W22703]
          Length = 279

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 137/257 (53%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   +S L   Q   L     R  + E I  ++G R+F+++ 
Sbjct: 17  RDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 76

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P F  
Sbjct: 77  LSVSSATLIPRPDTECLVEQALAH-LPATP----CRILDLGTGTGAIALALASERPDFAV 131

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVDI   A+ +A+ NA    ++   D LQS WF SV G F +IVSNPPYI++       
Sbjct: 132 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  +   
Sbjct: 191 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNSGF 249

Query: 245 FLVNAFKDYGGNDRVLL 261
             V  +KDYG NDRV L
Sbjct: 250 SAVMTYKDYGNNDRVTL 266


>gi|32033820|ref|ZP_00134105.1| COG2890: Methylase of polypeptide chain release factors
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209496|ref|YP_001054721.1| HemK-like protein [Actinobacillus pleuropneumoniae L20]
 gi|303251819|ref|ZP_07337990.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307244798|ref|ZP_07526897.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249119|ref|ZP_07531126.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307249195|ref|ZP_07531192.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253752|ref|ZP_07535606.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258209|ref|ZP_07539952.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260447|ref|ZP_07542142.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|126098288|gb|ABN75116.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|302649249|gb|EFL79434.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|306854243|gb|EFM86449.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854407|gb|EFM86603.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306858719|gb|EFM90778.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306863236|gb|EFM95176.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867669|gb|EFM99514.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869850|gb|EFN01632.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 290

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F+++ L
Sbjct: 29  DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDKNLQ 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +IF+  +
Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFKQYQ 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + +F+DYGGNDR+    R
Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287


>gi|298292695|ref|YP_003694634.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Starkeya novella DSM 506]
 gi|296929206|gb|ADH90015.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Starkeya novella DSM 506]
          Length = 283

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 128/231 (55%), Gaps = 3/231 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++ + L    GL+   ++   D  + +     L     R    E + R++G R+F+++ 
Sbjct: 25  REARALLKGGLGLADIDLVARADLPVAEEDAARLRALAARRADGEPLARLVGRREFWSLD 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +L+ +T  PRPETE LV++ALA    R  K   +RILDLGTGTGA+  ALL E P   G
Sbjct: 85  FSLAPETLVPRPETETLVEAALALFPDRAAK---LRILDLGTGTGAILAALLSEYPNAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+D+S  A   A+ N    G++ R   +   W  ++   FD++ SNPPYI +  +  L 
Sbjct: 142 LGIDLSEGAARQARDNLARLGLAGRSAVIVGRWAEAIHSRFDLVASNPPYIPARDIAALD 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            EVR+ DPR++LDGG DGL  YR +A  +   L   G   +E+G  Q+ DV
Sbjct: 202 KEVREHDPRLALDGGADGLDAYRVLAAALPGLLVPGGRAVLELGIGQEEDV 252


>gi|322513488|ref|ZP_08066598.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976]
 gi|322120707|gb|EFX92591.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976]
          Length = 290

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    ++ L   +   L   +   L+ E +  ILG ++F+++ L
Sbjct: 29  DANILLQAVTKRSKSAIFAFSETELSQTEMSQLETLLTCRLQGEPMAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL ++  R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPHTLIPRPDTERLVEVALEWAYKRLEIQKTLQILDLGTGTGAIALALASELGDQAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  +    LQSDWFS++E   F++IVSNPPYI+    +  
Sbjct: 149 IGVDFKPEAVVLAETNRQNLGF-QNVTFLQSDWFSALENQQFELIVSNPPYIDKQDENLK 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    DGLS  + I     R+L  +G   +E G+ Q   V +IF+  +
Sbjct: 208 YGDVR-FEPLSALVAEQDGLSDLQKIIKNAPRYLANNGALMLEHGWQQAQAVQQIFQQYQ 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + +F+DYGGNDR+    R
Sbjct: 267 WDEIASFQDYGGNDRMTKAVR 287


>gi|154252200|ref|YP_001413024.1| HemK family modification methylase [Parvibaculum lavamentivorans
           DS-1]
 gi|154156150|gb|ABS63367.1| modification methylase, HemK family [Parvibaculum lavamentivorans
           DS-1]
          Length = 283

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 143/258 (55%), Gaps = 4/258 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  VTG +  ++I +P + +   +   L     R L  E + RILG R+F+ +  
Sbjct: 26  DARILVQAVTGATDIEMIREPAAPISAAEEEALAGFERRRLAREPVSRILGAREFWGLAF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++S T +PRP++E L++++L    P    R    +LDLGTGTG + L LL E P   G+
Sbjct: 86  AVTSATLDPRPDSETLIEASLKCLAPLARPR----LLDLGTGTGCLLLTLLHERPDASGI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS +AL++A+ N+   G++ R      +W   +   FD+++SNPPYI S  ++ L  
Sbjct: 142 GVDISEEALQVARENSARLGLAARARFQPGNWMEGLGEKFDLVISNPPYIASGEIEVLEP 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DPR++LDGG DGL  YR IA  +   L ++G+  VE+G  Q   V  IFE+    
Sbjct: 202 EVRGHDPRLALDGGADGLDAYRAIAAALPDVLTQEGVAVVELGAGQADAVRGIFEAAGCA 261

Query: 246 LVNAFKDYGGNDRVLLFC 263
           ++    D  G  R L+  
Sbjct: 262 VLRVDPDLSGVPRALVAA 279


>gi|303250477|ref|ZP_07336674.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307251518|ref|ZP_07533425.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650465|gb|EFL80624.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306860982|gb|EFM92988.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 290

 Score =  147 bits (371), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F+++ L
Sbjct: 29  DANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELGDKAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+    +  
Sbjct: 149 IGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQDKNLQ 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +IF+  +
Sbjct: 208 YGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQIFKQYQ 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + +F+DYGGNDR+    R
Sbjct: 267 WDEIESFQDYGGNDRLTKAVR 287


>gi|320102130|ref|YP_004177721.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Isosphaera pallida ATCC 43644]
 gi|319749412|gb|ADV61172.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Isosphaera pallida ATCC 43644]
          Length = 319

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 144/257 (56%), Gaps = 3/257 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V   + +Q+ +  D V+ D  R    + + R  + E    ++G ++FY +  
Sbjct: 56  EAEVLLAHVLDHARYQLYMHIDDVVSDAARSAFRDLVKRRSEGEPSAYLVGRKEFYALSF 115

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP++E LV  AL  +L ++  R+  R+ D+GTG+G + +A+ + SP  + V
Sbjct: 116 KVTPAVLIPRPDSEFLVIEALE-ALGKMVGRETPRLADVGTGSGCLAVAVARRSPQVRIV 174

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
            +D S +AL +A+ NA  +GV++R D  + D F  +  E  FD+IVSNPPY+ + + + L
Sbjct: 175 AIDRSAEALAVARENAQAHGVADRIDFCEGDLFEPLDPEDRFDLIVSNPPYVATPVWETL 234

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              +++F+PR++LDGGIDGL   R + D  +  L+  G  ++EIG +Q   V R+F    
Sbjct: 235 EPTIKNFEPRLALDGGIDGLDVIRRLVDQAAVRLHPGGTLAMEIGSDQGEAVTRLFAGDL 294

Query: 244 LFLVNAFKDYGGNDRVL 260
                  +D+ G DRV+
Sbjct: 295 WSPPTIRRDHAGLDRVV 311


>gi|291520550|emb|CBK75771.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Butyrivibrio fibrisolvens 16/4]
          Length = 276

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 7/260 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D+   L  V+G++  Q  +     + +   +     ++R   H  +  I G +DF
Sbjct: 20  LDAKIDAWLLLSFVSGITKAQYFLKQSEEIPENTLYKYKEVLLRRASHVPLQHITGEQDF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   ++     PR +TE LV+ AL   +P         +LDL TG+G V ++L+    
Sbjct: 80  MGLTFWVNEHVLIPRQDTETLVEEALKV-IPSGS-----HVLDLCTGSGCVIISLVALGQ 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G+GVDIS  AL +A+ N  T  V ++    + D F+ V+G F+ IVSNPPYI + +V
Sbjct: 134 GLSGIGVDISEDALVVARENG-TRIVGKKVAFEKGDLFTGVQGRFNAIVSNPPYIPTAVV 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L +EV+D +PR++LDG  DGL  YR I      +LN+ G   VEIGY+Q  DV ++F 
Sbjct: 193 EGLAVEVKDHEPRLALDGTEDGLLFYRRITASAQDYLNEGGWLLVEIGYDQGQDVSKLFT 252

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 V   +D  GNDRV+
Sbjct: 253 DAGFKDVEVVQDLAGNDRVV 272


>gi|310816144|ref|YP_003964108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ketogulonicigenium vulgare Y25]
 gi|308754879|gb|ADO42808.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ketogulonicigenium vulgare Y25]
          Length = 276

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 139/263 (52%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A RD+   L    G++  ++ +V PD V++  Q      AI +  K + + +I+G R FY
Sbjct: 23  AARDARLLLAHALGVAPDRLTLVLPD-VVNAAQADAFHAAIAQRAKRQPVAQIIGQRMFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ DT +PRPETE+L+ +ALA        +   R+LD+GTGTG + L LL E+  
Sbjct: 82  GRNFLVTPDTLDPRPETEVLIAAALA--------QPFTRVLDIGTGTGCILLTLLAENQQ 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G GVD+S  AL++A+ NAV  G+  R +   SDW  +  G FD+IVSNPPYI    + 
Sbjct: 134 AVGQGVDLSPAALDVAQRNAVALGLDTRAEFSLSDWGMAATGRFDLIVSNPPYIALDEMA 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  ++P ++L  G DGL+ YR I     R L+  G   VE G  Q   +  I ++
Sbjct: 194 GLSPEVTGWEPAMALTDGGDGLAAYRAILADAPRLLSDAGRVIVEFGPTQADAIRAIGDA 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                     D  G DR L+F +
Sbjct: 254 AGFTSAQLHHDLDGRDRCLVFSQ 276


>gi|332306090|ref|YP_004433941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173419|gb|AEE22673.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 287

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   +C+V   ++  ++  P+  LD  Q     + + +  +   +  +LG+RDF++
Sbjct: 30  AATDSRLLMCQVLQCNTVYLMTWPEKPLDAAQLRAFEHLVEKRKQGHPVAYLLGYRDFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +S  T  PRPETELLV++AL   L      +   +LDLGTGTGA+ LAL  E P +
Sbjct: 90  LRLQVSPATLIPRPETELLVETALDLPL-----NNEANVLDLGTGTGAIALALASEKPDW 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
           +  G+D +  A+ +AK N   N +   RF   QSDWFS++    FD+IVSNPPY+E   V
Sbjct: 145 QVAGIDKNADAVALAKQNGQANKLPHVRFT--QSDWFSNLSAASFDLIVSNPPYVEQSSV 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L  G DGL   R I      +L  +     E G+ Q   V  +  
Sbjct: 203 YLQQGDVR-FEPASALTSGEDGLDDIRFIIPNAIEYLAPNAWLVFEHGHLQAQGVQALLR 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V +  D  G+ RV L C
Sbjct: 262 ENSFEQVRSVSDLNGHPRVTLGC 284


>gi|300716407|ref|YP_003741210.1| protein methyltransferase [Erwinia billingiae Eb661]
 gi|299062243|emb|CAX59360.1| Protein methyltransferase [Erwinia billingiae Eb661]
          Length = 276

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/257 (38%), Positives = 138/257 (53%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DS L   Q   L + + R    E +  + G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRSWIIAFDDSELSAEQLSQLDDLLARRANGEPVAYLTGQREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++S DT  PRP+TELLV+ ALA  LP         +LDLGTGTGA+ LA+  E P  + 
Sbjct: 82  LSVSPDTLIPRPDTELLVEQALAH-LPETAS----TVLDLGTGTGAIALAIASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            GVD    A+ +A+SNA   G++  RF    S+WFS+V G  F +IVSNPPYI++     
Sbjct: 137 TGVDRIAAAVSLAESNAQRLGITNARFRL--SNWFSAVSGEQFTLIVSNPPYIDAEDQHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  + IA     +L   G   +E G+ Q   V  I +  
Sbjct: 195 QQGDVR-FEPDSALIAADNGLADIKQIAAEAGHYLLPGGWLLLEHGWQQAEAVRAILQQN 253

Query: 243 KLFLVNAFKDYGGNDRV 259
               V   KDYGGNDRV
Sbjct: 254 HFVSVATAKDYGGNDRV 270


>gi|315634082|ref|ZP_07889371.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393]
 gi|315477332|gb|EFU68075.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393]
          Length = 299

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++ +  LT  + R L+ E I  +LG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTQEKLTALLSRRLQGEPIAYLLGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKE-SP 120
            +S+ T  PRP+TE+LV+ A+A S   ++K        RILDLGTGTGA+ LAL  E  P
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAISAEALQKCGQNSQCFRILDLGTGTGAIALALASELKP 145

Query: 121 FFKG-------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             +        +GVD+    + +A SNA  N +   F  LQS WF  + G FD+IVSNPP
Sbjct: 146 IAQKQQIQLEVIGVDVMPNVVALATSNAEKNQLGVSF--LQSHWFDKMTGTFDLIVSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L    +G +  R I     + +   G   VE G+ Q  
Sbjct: 204 YIDAKDEHLTQGDVR-FEPLSALVAEEEGYADLRHIIANAPKFMRTGGYLLVEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      +   +DYG N+RV L C
Sbjct: 263 KVRSIFQENFWTSIETLRDYGNNERVTLGC 292


>gi|253997607|ref|YP_003049671.1| HemK family modification methylase [Methylotenera mobilis JLW8]
 gi|253984286|gb|ACT49144.1| modification methylase, HemK family [Methylotenera mobilis JLW8]
          Length = 292

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 131/245 (53%), Gaps = 14/245 (5%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L +H+  V P SV  D +       + R L  E +  ILG+R+FY + L +S DT  PRP
Sbjct: 46  LLAHEQDVLPASVSADFETL-----LTRRLAGEPVAYILGYREFYGLNLKVSPDTLIPRP 100

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +TE LV++ALA    +I       ILDLGTGTGAV LA+ +  P  +   VD S  AL I
Sbjct: 101 DTETLVEAALA----KIPTDTDYTILDLGTGTGAVALAIAQHRPHTQVTAVDASQGALHI 156

Query: 137 AKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           A+ NA   G+++ RF    S WFS+VE   F++I+SNPPYIE         ++R F+P  
Sbjct: 157 AEHNAQQLGLTQVRFSL--SHWFSAVESERFNLIISNPPYIEQHDPHLGQGDLR-FEPIS 213

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G+DGL   R I      HL   G   +E GYNQ   V  +     L  +   KD G
Sbjct: 214 ALASGVDGLDDIREIIAHSLIHLQPQGWLMLEHGYNQAHLVADLMAESGLVDIETIKDLG 273

Query: 255 GNDRV 259
            NDRV
Sbjct: 274 ANDRV 278


>gi|261496508|ref|ZP_05992888.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307711|gb|EEY09034.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
          Length = 363

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 142/256 (55%), Gaps = 4/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    ++VL +R+   L   + R  K E +  ILG+R+F+++ L
Sbjct: 104 DANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREFWSLPL 163

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL ++  R+E + +++ILDLGTGTGA+ LAL  E     + 
Sbjct: 164 KVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELGEKAQI 223

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+++A+ N    G+++    LQSDWFSS+    FD+IVSNPPYI+    +  
Sbjct: 224 IGVDFQNEAVQLAEENRQHLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDEADENLT 282

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GLS  + I      +L   G   +E  + Q   V  +F+   
Sbjct: 283 VGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDLFDLNL 341

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DY GNDRV
Sbjct: 342 WEQVETAQDYAGNDRV 357


>gi|261493249|ref|ZP_05989776.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261311099|gb|EEY12275.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 417

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 144/261 (55%), Gaps = 4/261 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++VL +R+   L   + R  K E +  ILG+R+F
Sbjct: 153 LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 212

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           +++ L +S  T  PRP+TE LV+ AL ++  R+E + +++ILDLGTGTGA+ LAL  E  
Sbjct: 213 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 272

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
              + +GVD   +A+++A+ N    G+++    LQSDWFSS+    FD+IVSNPPYI+  
Sbjct: 273 EKAQIIGVDFQNEAVQLAEENRQHLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDEA 331

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I      +L   G   +E  + Q   V  +
Sbjct: 332 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 390

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
           F+      V   +DY GNDRV
Sbjct: 391 FDLNLWEQVETAQDYAGNDRV 411


>gi|210623299|ref|ZP_03293716.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275]
 gi|210153700|gb|EEA84706.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275]
          Length = 293

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 131/220 (59%), Gaps = 8/220 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTG 109
           I  I+G R+F  +   +      PRP+TE LVD  +  +S    +++D + ILD+GTG+G
Sbjct: 75  IAYIVGNREFMGLDFYVQEGVLIPRPDTETLVDEIIRIYSEEEYKQKDRIDILDIGTGSG 134

Query: 110 A--VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---L 164
           A  V LA   ++ F K    DIS  ALEI   NA TN V +R + ++SD FS++EG   +
Sbjct: 135 AITVSLAYYIKNSFVKSF--DISDIALEIGAKNAATNSVEDRTEFIKSDVFSALEGEGEI 192

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D+IVSNPPYI   ++  L  +V+D++P  +L+GG DGL  YR+I +G  ++L K G+ +
Sbjct: 193 LDIIVSNPPYIRKDVIPTLHTQVKDYEPYNALEGGEDGLDFYRSITEGSVKYLKKGGILA 252

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            E+G++Q  DV  I ++     +   KD  G DRV++  +
Sbjct: 253 YEVGHDQAEDVSNIMKNCGYEKIYTKKDLPGIDRVVIGTK 292


>gi|158426117|ref|YP_001527409.1| modification methylase [Azorhizobium caulinodans ORS 571]
 gi|158333006|dbj|BAF90491.1| modification methylase [Azorhizobium caulinodans ORS 571]
          Length = 287

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 4/220 (1%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L    + R++G ++F+++  +LS +T  PRP+TE +V++AL   +   ++   + ILDLG
Sbjct: 70  LSGVPVARLVGEKEFWSLSFSLSPETLVPRPDTETVVEAAL---MTVTDRTAPLHILDLG 126

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+  ALL E P   G+GVD S  A   A+ N    G+  R   +  DW S++ G F
Sbjct: 127 TGSGAILAALLVELPAAVGIGVDQSEGAARTARDNLARAGLQGRGTVIVGDWASALGGGF 186

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D++VSNPPYI S+ +  L +EVR+ DP  +LDGG DGLS YR IA    R L   G   +
Sbjct: 187 DLVVSNPPYIPSIDIVGLAIEVRENDPLAALDGGADGLSSYRIIAAEAPRLLKAGGHLVL 246

Query: 226 EIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDRVLLFCR 264
           E+G  Q+ +V  +  +  L +   A +D GG  R L+  R
Sbjct: 247 ELGIGQEAEVAALAGAAGLAITGPARRDLGGIPRALVARR 286


>gi|307296978|ref|ZP_07576794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobium chlorophenolicum L-1]
 gi|306877504|gb|EFN08732.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobium chlorophenolicum L-1]
          Length = 289

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 124/223 (55%), Gaps = 14/223 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L  E I  I G RDF+ + L ++ D   PRP++E L+++AL         R   RI
Sbjct: 71  LQRRLTGEPIAYITGTRDFWTISLHVTPDVLIPRPDSETLIEAALDH----FGARSPARI 126

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ LA L + P  +G GVDIS  AL +A+ NA   G  ER      +W   +
Sbjct: 127 LDLGTGSGALLLAALSQWPQARGTGVDISPAALAVAQDNADRLGFGERAAFRLGNWAEGI 186

Query: 162 EGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           EG FD+I+ NPPYI    ++  D L       +P  +L  G DGL  YR IA  + R L 
Sbjct: 187 EGPFDLILINPPYIARDVALAGDVL------HEPESALFAGADGLDDYRRIAPTLPRLLA 240

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            DG+ ++EIGY+Q++ V  +   + L  V + +D  G++R L+
Sbjct: 241 PDGMAAIEIGYDQRLSVSALLADQGLS-VASRRDLAGHERCLM 282


>gi|260589192|ref|ZP_05855105.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM
           20583]
 gi|331082608|ref|ZP_08331731.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540273|gb|EEX20842.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM
           20583]
 gi|330400227|gb|EGG79869.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 285

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 140/255 (54%), Gaps = 6/255 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V+G+S     V  D  + +         I +  KH  + ++     FY ++ 
Sbjct: 26  DAWLLLEYVSGISRSWYFVHEDEEISENDIEEYQILIEQRGKHIPLQQLTKEAYFYGMKF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +   PR +TE+LV+  L+ S    ++++ +++LD+ TG+G + LALL       G 
Sbjct: 86  FVNENVLIPRQDTEVLVEQVLSLS----KEKENLKLLDMCTGSGCILLALLANLKQASGT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD+S KALE+A+ N+   G+   +  +QSD F  V G +D+IVSNPPYIE+ +++ L  
Sbjct: 142 GVDLSEKALEVAQRNSKELGIEVSW--VQSDLFDKVSGSYDIIVSNPPYIETSVIEGLMD 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV+ ++PR++LDG  DGL  YR I     ++L  +G+ + EIGYNQ   V    +     
Sbjct: 200 EVKLYEPRMALDGTEDGLFFYREITMQAGKYLKNNGILAFEIGYNQGKAVSEFMKENGYK 259

Query: 246 LVNAFKDYGGNDRVL 260
            V   +D  G DRV+
Sbjct: 260 EVQVLQDLAGLDRVV 274


>gi|154502574|ref|ZP_02039634.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149]
 gi|153796766|gb|EDN79186.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149]
          Length = 283

 Score =  145 bits (366), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 6/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG++     ++P+  + D++       I +      +  + G ++F  +  
Sbjct: 25  DAWYLLEHVTGITKASYYMEPEHPMHDQEEREYLELIRKRSTRIPLQHLTGVQEFMGLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP-FFK 123
            ++     PR +TE+LV++AL   + + E+   +R+LD+ TG+G + L+LL E  P    
Sbjct: 85  LVNEHVLIPRQDTEVLVETAL--DVCKQEQMGEIRLLDMCTGSGCILLSLLHELKPRTVT 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GVGVD+S +AL +A+ NA    +   F  L+SD F +V+G +DV+VSNPPYI + +++ L
Sbjct: 143 GVGVDLSKEALCVAEKNAEKLKIDAEF--LESDLFENVKGTYDVVVSNPPYIRTSVIETL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV+D DP ++LDG  DGL  YR I +    +L K G    EIG +Q  DV  + E   
Sbjct: 201 QEEVKDHDPYLALDGKEDGLYFYRRIIEQAPAYLKKKGWLLFEIGSDQGEDVKNLMEQAG 260

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V+  KD  G DRV+ 
Sbjct: 261 YTGVSVKKDLAGLDRVVF 278


>gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum
           ATCC 51196]
 gi|225794369|gb|ACO34459.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum
           ATCC 51196]
          Length = 294

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 7/238 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  V G +   +IV  D  +   Q     + I+R    E +  I+G ++F+ 
Sbjct: 36  ARRDAELLLQHVLGRNRAWLIVHSDDAMTAEQVTQFESWILRRAAQEPVQYIVGEQEFWG 95

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++ D   PRPETE LV++AL     R+ + + VR+ D+GTG+GA+ +AL    P  
Sbjct: 96  LRLRVTPDVLIPRPETEHLVEAALE----RLPEGETVRVADIGTGSGAIAIALAASRPQA 151

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
               +D+S  AL IA+ NA  +GV+ER   LQSD  ++V G  F +IVSNPPY+     +
Sbjct: 152 LVTALDLSEAALRIARENAAAHGVAERMRFLQSDLLAAVRGERFAMIVSNPPYVPG--GE 209

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            L  +VRDF+P  +L  G +GL  YR +    +  L   G   +EIG+ Q+  +  + 
Sbjct: 210 ELEPQVRDFEPHSALFAGAEGLDVYRRLIPEAAEVLEPGGWLLMEIGHGQRAALAELL 267


>gi|158520490|ref|YP_001528360.1| HemK family modification methylase [Desulfococcus oleovorans Hxd3]
 gi|158509316|gb|ABW66283.1| modification methylase, HemK family [Desulfococcus oleovorans Hxd3]
          Length = 297

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 7/261 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G+    + +  D  L   +     + I R    E +  ILG + F+++ L ++ 
Sbjct: 36  LLAHVLGIKRLDLYLRYDQPLTPDELAAFRSLISRRKAGEPVAYILGEKAFWSMDLVVTP 95

Query: 70  DTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           D   PRP+TE LV++AL+F + P  +      +L+  TG+GAV LAL K  P  +    D
Sbjct: 96  DVLIPRPDTECLVETALSFLAGPGSDTPAERWVLEPATGSGAVVLALAKSHPGCRFFAFD 155

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLG 184
            S  AL +A+ NAV    + R     SDWFS    S  G FD+IV+NPPY+ S  +D L 
Sbjct: 156 RSTAALAVARKNAVRYDPAHRVVFFASDWFSALGNSASGRFDMIVANPPYVASGDIDHLA 215

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E+  F+PR++LDGG DGL   R I     R L   G   +EIG++QK  V ++ E   L
Sbjct: 216 PEI-GFEPRMALDGGADGLDPVRHILQAAGRFLKPGGRLLIEIGWDQKERVAQVTEQAGL 274

Query: 245 FLVNAF-KDYGGNDRVLLFCR 264
           +    F KD  G+ RV+   R
Sbjct: 275 YTAVGFAKDLAGHHRVVHMQR 295


>gi|297182759|gb|ADI18913.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF0010_09O16]
          Length = 279

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 143/261 (54%), Gaps = 5/261 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  DS   + +    +   +I++    +  R   +  N I      + I +I+  +DF
Sbjct: 20  ISAKLDSEILMSQAIRKNKKFIILNLHKEIKKRDLEYFDNLIQERAGRKPIAQIVKKKDF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     ++++   PRP+TE L++  L      ++ ++ ++ILD+G G+G + +++LKE  
Sbjct: 80  WKYEFIVNNNVLIPRPDTETLIEQTLKL----VKNKNRLQILDIGIGSGCILMSILKEKK 135

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            F G G+DIS K+L+I+K N     ++ R    +S+  +   G +D+IVSNPPYI+  I+
Sbjct: 136 NFIGTGIDISSKSLQISKVNGQKLRINNRLRLFKSNIDNFNTGKYDLIVSNPPYIKKSIL 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            CL  ++  F+P+ +LDGG+DGLS  R + +  S  + + G   +EIG++QK  V +I  
Sbjct: 196 KCLEKDI-GFEPKQALDGGLDGLSEIRKVINKSSELIKRSGHLIIEIGFDQKNKVKKILR 254

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
            +  ++    KD   +DR ++
Sbjct: 255 DKGFYIKKTVKDLSNHDRCIV 275


>gi|254461332|ref|ZP_05074748.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium HTCC2083]
 gi|206677921|gb|EDZ42408.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 278

 Score =  144 bits (364), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 7/257 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           +RD       V+ + + ++ +     + ++QR      + R + +  I +I+  R F+  
Sbjct: 23  MRDLRILAAHVSQVDASRMTLHMHDEVTEKQREHFKLLVNRRMSNMPISKIIQKRLFWGR 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +  +  +PR +TE L+ + L     ++  +D  ++LDLGTG+GA+ L L  E P   
Sbjct: 83  EFEVDLNVLDPRGDTETLIAACL-----KLGPQD--KVLDLGTGSGAIGLTLTAEWPLAD 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DIS +AL++A+ N  +  V++    L+SDWF +VEG FD+IVSNPPYI     D L
Sbjct: 136 VMCTDISDEALDVARLNMKSFDVADGVRLLRSDWFEAVEGRFDLIVSNPPYIALEEWDGL 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR FDPR++L    DGLS YR I      +L KDG   VEIG+ Q  DV  ++ +  
Sbjct: 196 DFEVRGFDPRMALTDEADGLSCYRVIVAQAGAYLEKDGHLMVEIGHAQGRDVQDLYAAAG 255

Query: 244 LFLVNAFKDYGGNDRVL 260
              +    D  G DRV+
Sbjct: 256 FTQITCLPDLAGRDRVV 272


>gi|88861345|ref|ZP_01135975.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas tunicata D2]
 gi|88816611|gb|EAR26436.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas tunicata D2]
          Length = 281

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 10/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G S   +   PD  L  +Q+     A+ R L  E I  I+G+R+F++++L
Sbjct: 27  DAQVLLLDVIGQSRSYLFTWPDKALTAQQQTQFEQAVARRLAGEPIAHIIGYREFWSLKL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL+ +LP     +  ++LDLGTGTGA+ LAL  E   ++  
Sbjct: 87  KVSPATLIPRPDTETLVEHALSLALP-----EHAKVLDLGTGTGAIALALASEQFNWQVT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           G D    A+ +A++N     +   RF  +QS+WFS+     FD+IVSNPPYIE       
Sbjct: 142 GCDRIEDAVVLAQTNQAALEIKNCRF--VQSNWFSAFSTEQFDLIVSNPPYIEQDDPHLS 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  RTI +     L   G   +E GY Q   V  IF    
Sbjct: 200 QGDVR-FEPLSALVAPDNGLADIRTIVNQARTFLTSGGYLLLEHGYQQAEQVSAIFLQMA 258

Query: 244 LFLVNAFKDYGGNDRVLL 261
              +   KD  GNDRV L
Sbjct: 259 YKDIRTIKDLAGNDRVTL 276


>gi|210608517|ref|ZP_03287893.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787]
 gi|210153008|gb|EEA84014.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787]
          Length = 287

 Score =  144 bits (364), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 8/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTGL      + PD  + D Q       + +  +H  +  I G ++F  +  
Sbjct: 25  DAWYLLEFVTGLDRTAYFLKPDEKITDEQGSLYKAYLEQRAQHIPLQHITGVQEFMGLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE LV+  L++  P++      ++LD+ TG+G + ++L+K     +GV
Sbjct: 85  AVNEHVLVPRQDTETLVECVLSYVQPQM------KVLDMCTGSGCILISLMKLGKIAQGV 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DIS +AL+ AK NA  + V      ++SD F ++   +DVIVSNPPYI + +++ L  
Sbjct: 139 GADISDEALKTAKKNAEKHQVEPLL--IKSDLFENIVDKYDVIVSNPPYIRTAVIEELKE 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DP ++LDG  DGL  YR + +    +L K G+   EIG++Q  DV  + E     
Sbjct: 197 EVRCHDPILALDGKEDGLYFYRKLIEQSPMYLKKGGMLYFEIGHDQGQDVKCLMEKAGFE 256

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD  G DRV+ 
Sbjct: 257 DVMVKKDLAGLDRVVF 272


>gi|150388170|ref|YP_001318219.1| HemK family modification methylase [Alkaliphilus metalliredigens
           QYMF]
 gi|149948032|gb|ABR46560.1| modification methylase, HemK family [Alkaliphilus metalliredigens
           QYMF]
          Length = 293

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 135/261 (51%), Gaps = 6/261 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC +      Q+ + P+  +D+  +      I +  K   +  I+G ++F  +  
Sbjct: 26  DAEVILCHLLKTERIQLHIYPERKVDEEVQEQFWEGIQKRKKRMPVQYIVGTQEFMGLDF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + S    PR +TE+LV+S L          + V ++D+GTG+GA+ ++L +     K  
Sbjct: 86  RVESGVLIPRADTEILVESVLGLYEVHY-NNEAVALMDIGTGSGAIAISLARFIERSKIY 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIV 180
            +D+S KALEIA++N  TN V  +        F  +     EG F  ++SNPPYI   +V
Sbjct: 145 AIDLSEKALEIAENNGRTNEVQHKISFFYGSLFEPLKGYDLEGTFQFVISNPPYIPPDVV 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++PR++L+GG DGL  YR I +   ++L   G    EIGY+Q   V  + E
Sbjct: 205 EELSPQVKDYEPRMALEGGADGLDFYREIVEKAPQYLQMKGWLCFEIGYDQGEQVKGLME 264

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
           +R    V   +D  G DRV++
Sbjct: 265 TRGFSRVEVIRDLAGLDRVVI 285


>gi|332558341|ref|ZP_08412663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodobacter sphaeroides WS8N]
 gi|332276053|gb|EGJ21368.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodobacter sphaeroides WS8N]
          Length = 278

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+D+ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIDAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V+   D  G DR++
Sbjct: 253 AGLARVSVLPDLDGRDRLV 271


>gi|254450152|ref|ZP_05063589.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Octadecabacter antarcticus 238]
 gi|198264558|gb|EDY88828.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Octadecabacter antarcticus 238]
          Length = 268

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 127/235 (54%), Gaps = 10/235 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D   D  +  F  +   R+ +    H +LG+RDFY  R  ++ D  +PR +TE L+++AL
Sbjct: 39  DEFEDAPEAAFFADIGQRAARTPVSH-LLGYRDFYGRRFQVTPDVLDPRGDTETLIEAAL 97

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A             +LDLGTG+G + + LL E     G+GVD+S +A+ +A+ NA+  GV
Sbjct: 98  AVPF--------ADVLDLGTGSGCILVTLLAERGAVTGIGVDVSPRAVTVAEQNALRLGV 149

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +R     SDWF  V   FD+IVSNPPYI    +  L  E+  ++PR++L    DGL+ Y
Sbjct: 150 QDRCAFAVSDWFKGVGVPFDLIVSNPPYIALDEMAGLAPEL-GYEPRLALTDEGDGLAAY 208

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I  G + HL + G   VEIG  Q   V+ +FE   L  V    D  G DRV++
Sbjct: 209 REITAGAAGHLRQGGWLMVEIGPTQGGAVIALFEVAGLEQVGIRVDLDGRDRVVV 263


>gi|221639322|ref|YP_002525584.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131]
 gi|221160103|gb|ACM01083.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131]
          Length = 278

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 132/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+   +  + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARVARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V+   D  G DR++
Sbjct: 253 AGLAQVSVLPDLDGRDRLV 271


>gi|103488190|ref|YP_617751.1| HemK family modification methylase [Sphingopyxis alaskensis RB2256]
 gi|98978267|gb|ABF54418.1| modification methylase, HemK family [Sphingopyxis alaskensis
           RB2256]
          Length = 274

 Score =  144 bits (362), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 139/262 (53%), Gaps = 18/262 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVR 64
           D+   +    G+    +++DP +  D    F   +A+V R + HE +  ILG+RDF+ +R
Sbjct: 25  DAELLMADALGIERQALLLDP-ARYDVPADF---DALVERRMAHEPVAYILGYRDFWTIR 80

Query: 65  LTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           L +      PRP++E L+ +A+     + PR        ILDLGTG G +  A + E   
Sbjct: 81  LAVGPGALIPRPDSETLIAAAVQHFGAAGPR-------HILDLGTGPGTLLFAAMSEWAD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G+GVD S  AL  A++NA+  G+++R   +Q DW + V G FD+I+ NPPYI     +
Sbjct: 134 ARGLGVDASDVALGYARANAIALGLADRVGLMQGDWAAGVTGRFDLILCNPPYIAE--SE 191

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V D +P  +L  G DGL+ YR I   +   L   G+  +EIG+ Q++ V  + ++
Sbjct: 192 ALMPDVADHEPAGALFAGADGLADYRRIIPDLPHLLAPGGIAILEIGHTQRISVSEMADA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
              F V   +D  G DR LL  
Sbjct: 252 AG-FAVACRQDLAGRDRALLLT 272


>gi|109898877|ref|YP_662132.1| HemK family modification methylase [Pseudoalteromonas atlantica
           T6c]
 gi|109701158|gb|ABG41078.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudoalteromonas atlantica T6c]
          Length = 298

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 139/273 (50%), Gaps = 20/273 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   +C V    +  ++  P+  LD+ Q       + +      I  +LG+RDF++
Sbjct: 30  AALDSRLLMCHVLQCETAYLMTWPEKPLDELQLRTYQQLVAKRKTGYPIAYLLGYRDFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +S  T  PRPETELLV++ L  +LP  E      +LDLGTGTGA+ LAL  E P +
Sbjct: 90  LRLRVSPATLIPRPETELLVETVL--NLPIAED---AHVLDLGTGTGAIALALASEKPNW 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-----------GLFDVIVS 170
           + +G+D S  A+ +AK NA  N + + RF  +QSDWFS++E            +F +IVS
Sbjct: 145 QVLGIDKSADAVALAKQNAELNSLPQVRF--MQSDWFSALEQTQLDQQNNQHNVFSLIVS 202

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPY+E   V     +VR F+P  +L  G DGL   R I       L   G  + E GY 
Sbjct: 203 NPPYVEDDSVYLQQGDVR-FEPASALTSGKDGLDDIRIIISKAITFLPSGGWLAFEHGYQ 261

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q   V  +  +     V++  D     R+ L C
Sbjct: 262 QAQGVQALLVNNGFEQVHSVNDLNDLPRITLGC 294


>gi|251792739|ref|YP_003007465.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534132|gb|ACS97378.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aggregatibacter aphrophilus NJ8700]
          Length = 299

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 15/268 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   T  S   ++   ++VL+ +    LT  + R LK E I  +LG ++F+++ L
Sbjct: 26  DALVLLQSATQKSRAFILAFGETVLEKKTLEKLTALLSRRLKGEPIAYLLGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLKESPF 121
            +S  T  PRP+TE+LV+ A+  ++ +++K D      RILDLGTGTGA+ LAL  E  F
Sbjct: 86  AVSEKTLIPRPDTEVLVEKAVEIAIEKLQKCDQHSPSFRILDLGTGTGAIALALASELKF 145

Query: 122 FKG--------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                      +GVD   + +E+A++NA  N ++  F  LQS WF +V G FDVIVSNPP
Sbjct: 146 VAQKQQIQLDIIGVDFLPEIVELARTNAKKNQLNVHF--LQSHWFDNVRGQFDVIVSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L     G +  R I +   ++L ++G   +E G+ Q  
Sbjct: 204 YIDNNDEHLNQGDVR-FEPLSALVAEEGGYTDLRHIIEHAPQYLTENGYLLLEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            V  IF+      V   +DYG N+RV L
Sbjct: 263 KVRSIFQMNLWQDVETCRDYGNNERVTL 290


>gi|123442666|ref|YP_001006643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122089627|emb|CAL12477.1| putative protoporphyrinogen oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 284

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q   L     R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLSFVTGRARSYLLAFGETQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LSVSSATLIPRPDTECLVEQALAH-LPVTP----CRILDLGTGTGAIALALASERPDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVDI   A+ +A+ NA    ++   D LQS WF SV G F +IVSNPPYI++       
Sbjct: 137 MGVDIKADAVALARHNAKKLAIN-NVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHLNE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  +   
Sbjct: 196 GDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLMLEHGWQQATAVQKLLNNSGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V  +KDYG NDRV L
Sbjct: 255 SAVMTYKDYGNNDRVTL 271


>gi|254362306|ref|ZP_04978418.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           PHL213]
 gi|153093886|gb|EDN74814.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           PHL213]
          Length = 288

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 142/256 (55%), Gaps = 4/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    +++L + +   L   + R  K E +  ILG+R+F+++ L
Sbjct: 29  DANLLLQAVTKRSKSAIFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
            +S  T  PRP+TE LV+ AL ++  R+  + +++ILDLGTGTGA+ LAL  E     + 
Sbjct: 89  KVSPATLIPRPDTERLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQI 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           +GVD   +A+++A+ N    G+++    LQSDWFSS+    FD+IVSNPPYI+    +  
Sbjct: 149 IGVDFQNEAVQLAEENRRNLGLNQ-VTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLT 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GLS  + I +    HL   G   +E G+ Q   V  +F+   
Sbjct: 208 VGDVR-FEPLTALVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHL 266

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DY GNDRV
Sbjct: 267 WEQVETAQDYAGNDRV 282


>gi|307942490|ref|ZP_07657839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseibium sp. TrichSKD4]
 gi|307774311|gb|EFO33523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseibium sp. TrichSKD4]
          Length = 280

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 117/212 (55%), Gaps = 6/212 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTG 109
           + RILG R+FY +   L++DT EPRP+TE+LVD+ L      I   D   R LD+GTGTG
Sbjct: 70  VGRILGVREFYGLEFQLNADTLEPRPDTEILVDTVL-----NIAPTDTAWRFLDVGTGTG 124

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ +AL   S   +G   DIS  AL  AK+NA  NGV  R   ++  + +   G FD IV
Sbjct: 125 AIAIALAANSALAEGAASDISEHALLAAKANAAMNGVEGRLSFVRGSYLAPFSGQFDWIV 184

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI S +V  L   VR +DP  +LDGG DGL  YR +       L   G  ++EIG+
Sbjct: 185 SNPPYIASDVVRQLDTGVRAYDPLRALDGGADGLDAYRQLIPSAKELLAPSGHLALEIGF 244

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +Q   V  +        V   KD  G DRV+L
Sbjct: 245 DQGKSVSSLCTDHGYCGVEIIKDLAGQDRVVL 276


>gi|118581410|ref|YP_902660.1| HemK family modification methylase [Pelobacter propionicus DSM
           2379]
 gi|118504120|gb|ABL00603.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter
           propionicus DSM 2379]
          Length = 288

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 12/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC  TGL    + ++ D  L+  +       + R  + E +  ILG ++F  +  
Sbjct: 31  EAEWLLCAATGLDRVGLYLNYDKPLNREELSAFRQMVARRARREPLQHILGSQEFCGLEF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124
            +S D   PR +TE LV+ AL        +  + R +LD+GTG+G + ++L +  P  + 
Sbjct: 91  AVSPDVLIPRHDTETLVEEAL-------RRAPLARTVLDIGTGSGCIAVSLARRLPGARI 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           V  DIS  ALE+A++NA  NGV   F  L       V G  FD+IVSNPPYI S  +  L
Sbjct: 144 VASDISAVALEMARANARANGVDVEF--LHGSLLEPVAGRCFDLIVSNPPYIPSADIQLL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD DPR++LDGG DGL  YR +      HL   G   +E+G  Q  DV  +F    
Sbjct: 202 EPEVRDGDPRLALDGGPDGLDIYRRLIPASLEHLEPGGWLLLEVGMGQAQDVAEMFPLAD 261

Query: 244 LF-LVNAFKDYGGNDRVLLFCR 264
            +  V +  D GG +RV+   R
Sbjct: 262 GYGQVVSSPDPGGIERVVGAAR 283


>gi|157826325|ref|YP_001494045.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia akari str. Hartford]
 gi|157800283|gb|ABV75537.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia akari str. Hartford]
          Length = 522

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 19/258 (7%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L + +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLSEAEIKAFEKLLERRLKHEPITYITGVKEFYSREFIVNKHVLIPRSDTEIL 102

Query: 82  VDSALA------------FSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFK 123
           VD  L                P  +K D V       IL+LGTG+G V ++LL E P   
Sbjct: 103 VDVVLQRYSHSTQGHSTESGKPETKKLDSVVNPRNDSILELGTGSGCVAISLLCELPNAN 162

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
            +  DIS +A+E+AKSNA+ + V++R   + SDWF ++ +  FDVIVSNPPYI       
Sbjct: 163 IIATDISIEAIEVAKSNAIKHHVTDRIQIIHSDWFENLGKQKFDVIVSNPPYISHSEKSE 222

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           + LE  + +P  +L    DGL  YR IA      L  +G   +EIG+NQ   V +IF + 
Sbjct: 223 MALETLNHEPHFALFAEEDGLQAYRIIAKNAKPFLKPNGKIILEIGFNQAEKVSKIFLNY 282

Query: 243 KLFLVNAFKDYGGNDRVL 260
              + N +KD   ++RV+
Sbjct: 283 GYNIDNIYKDLQSHNRVI 300


>gi|227824240|ref|ZP_03989072.1| modification methylase [Acidaminococcus sp. D21]
 gi|226904739|gb|EEH90657.1| modification methylase [Acidaminococcus sp. D21]
          Length = 298

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 8/261 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G+    +    D  L+  +       ++R  K E +  ILG + F +   
Sbjct: 30  DAELLLCAVLGMRRIDLYTHFDQPLEKEELAAYRGYVMRRAKREPVAYILGEKGFLDYTF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++DT  PRPETELLV+  LA     +     + IL+LG G+GA+ ++LL +    +G+
Sbjct: 90  AVTADTLIPRPETELLVEKILA-----VTADGPLDILELGVGSGAILISLLLKRKEAQGL 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCL 183
           GVDIS  A+ +A+ NA   GV++R + + SD F  V EG  FD+IVSNPPYI    +  L
Sbjct: 145 GVDISEGAVAVARKNAKNLGVTDRSEIIVSDLFEKVPEGRKFDLIVSNPPYIPKKDLAGL 204

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P  +LDGG DGL  YR I      +L +DGL + E+G  +      +     
Sbjct: 205 SPEVRK-EPLGALDGGEDGLDFYRRIVREGMAYLKEDGLFAFEVGIGEGAAAADLLVQNG 263

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                 F DY G DR++L  +
Sbjct: 264 CGAARVFLDYAGIDRMVLAAK 284


>gi|297182949|gb|ADI19097.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0070_34A12]
          Length = 247

 Score =  143 bits (361), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/205 (41%), Positives = 118/205 (57%), Gaps = 8/205 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L    GL    +  +  +  DD         + R L  E + RI GWR+F+ +RL
Sbjct: 30  DSRLLLGTALGLDRAVLPHETLAGFDDAAAAMFEAFLNRRLGGEPVSRIRGWREFWTLRL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L+  T +PRP++E +V +ALA + P        R+LDLG GTGA+ LA L E P   G 
Sbjct: 90  ELAPATLDPRPDSETIVAAALAATDPG----KPCRMLDLGCGTGALLLACLSERPDATGT 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182
           GVDI+ +A+E+A  NA  NG+S R D +  D FS      G++D+I+ NPPYI +  +D 
Sbjct: 146 GVDIAGEAVEVATRNAGKNGLSARADFVIGD-FSDPDVAPGIYDLILCNPPYIPAGEIDG 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYR 207
           L +EV  FDPR++LDGG DGL  +R
Sbjct: 205 LAVEVACFDPRLALDGGDDGLDCWR 229


>gi|320109110|ref|YP_004184700.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Terriglobus saanensis SP1PR4]
 gi|319927631|gb|ADV84706.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Terriglobus saanensis SP1PR4]
          Length = 286

 Score =  143 bits (360), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 124/227 (54%), Gaps = 5/227 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+RDSH  L    G+S  Q++  P+ +L  RQ     + +   L+   I  + G ++FY 
Sbjct: 30  AVRDSHLLLQHALGVSREQIMAWPERMLTPRQSAAFEHLVSERLRAVPIQYLRGQQEFYG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRPETEL++D    +    I+   +V I D+G+G+GA+ + L  E    
Sbjct: 90  RNFLVTPDVLIPRPETELIIDEVKRY----IDPSALVMIADIGSGSGAIGVTLAAEFEMA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +    D+S  AL + + NA+ + VS+R  T +SD FS++ E +FD +VSNPPYI +   D
Sbjct: 146 RITAADLSPAALAVTEQNAIRHHVSDRVRTFESDLFSALGERIFDYVVSNPPYIAASERD 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            L  +VRD +P ++L GG DG   Y  +     +HL   G+  +EIG
Sbjct: 206 SLHPQVRDHEPELALYGGEDGFEIYTRLIPQAWKHLRPGGMLFLEIG 252


>gi|254440594|ref|ZP_05054088.1| methyltransferase, HemK family [Octadecabacter antarcticus 307]
 gi|198256040|gb|EDY80354.1| methyltransferase, HemK family [Octadecabacter antarcticus 307]
          Length = 272

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 120/220 (54%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G RDFY  R  +  D  +PRP+TE LV +AL        +R   R+
Sbjct: 57  VARRAAREPMSHLTGGRDFYEHRFEVGPDVLDPRPDTESLVIAAL--------ERPFDRV 108

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G V L+LL   P  +GVG D+S  AL +A  NA    +  R D + SDW++S+
Sbjct: 109 LDLGTGSGCVLLSLLAARPDARGVGSDVSAAALVVAARNAAKLEIDHRVDLIVSDWYASI 168

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G FD+IVSNPPY+    +  L  E+  ++PRI+L  G DGL  YR I  G   HL   G
Sbjct: 169 YGQFDLIVSNPPYLALAEMASLAPEL-SYEPRIALTDGGDGLGCYRVITAGAGEHLTAGG 227

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              VEIG +Q   VV +F +  L  V    D    DRV+L
Sbjct: 228 WLMVEIGPSQGAAVVAMFGAAGLVCVQIRHDLDARDRVVL 267


>gi|255994692|ref|ZP_05427827.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC
           49989]
 gi|255993405|gb|EEU03494.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC
           49989]
          Length = 307

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 136/264 (51%), Gaps = 16/264 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQ----------RFFLTNAIVRSLKHESIHRILGWRD 59
             C   G+S  ++++     L  RQ          R +  + I R LK + +  ILG  +
Sbjct: 41  LFCFAAGISKSELLLRQSRALSPRQGRSAFGEDVYRKY-DSIIARRLKRKPLQHILGSVN 99

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRD-VVRILDLGTGTGAVCLALLK 117
           F+     +      PR ETELLV+  L    + + E R+  +++LDL TGTG + + + K
Sbjct: 100 FFGFDFKVDERALIPRFETELLVEKTLEKIEVLQNETREKSIKVLDLCTGTGVIGITVKK 159

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIE 176
             P  +    DIS  ALE+A  N+ +     R   +QSD F    +  FD+IVSNPPYI 
Sbjct: 160 TIPDVECTLSDISSDALELAADNSKSLKADVRI--VQSDLFEEFADEKFDIIVSNPPYIR 217

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +D L LEVR+FDP ++LDGG DGL  YR IAD V  +L + G    EIG +Q  DVV
Sbjct: 218 RADIDKLQLEVREFDPHLALDGGEDGLELYRNIADEVQNYLKRSGYLICEIGADQGDDVV 277

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           +IF+          KD+   DR+L
Sbjct: 278 KIFKEAGAVNARIIKDFTDKDRIL 301


>gi|77463464|ref|YP_352968.1| putative methylase [Rhodobacter sphaeroides 2.4.1]
 gi|77387882|gb|ABA79067.1| Putative methylase [Rhodobacter sphaeroides 2.4.1]
          Length = 278

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVASRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V+   D  G DR++
Sbjct: 253 AGLARVSVLPDLDGRDRLV 271


>gi|157964997|ref|YP_001499821.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia massiliae MTU5]
 gi|157844773|gb|ABV85274.1| Methylase of polypeptide chain release factors [Rickettsia
           massiliae MTU5]
          Length = 511

 Score =  142 bits (359), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 133/251 (52%), Gaps = 10/251 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAEIEAFEKLLERRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           VD       PR    D+        + IL+LGTG+G + ++LL E P    +  DIS  A
Sbjct: 103 VDVVFQCH-PRFRGDDISENCNDKFLNILELGTGSGCIAISLLCELPNANVIATDISLDA 161

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +EI KSNA    V++R   + S+WF ++E   FD IVSNPPYI       + +E  +++P
Sbjct: 162 IEIIKSNAAKYSVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEKSEMAIETINYEP 221

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+  V +IF      + + +KD
Sbjct: 222 SIALFAEKDGLHAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFLDHGYNIESVYKD 281

Query: 253 YGGNDRVLLFC 263
             G+ RV+LF 
Sbjct: 282 LQGHSRVILFT 292


>gi|125974913|ref|YP_001038823.1| HemK family modification methylase [Clostridium thermocellum ATCC
           27405]
 gi|256003830|ref|ZP_05428817.1| modification methylase, HemK family [Clostridium thermocellum DSM
           2360]
 gi|281418621|ref|ZP_06249640.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum JW20]
 gi|125715138|gb|ABN53630.1| modification methylase, HemK family [Clostridium thermocellum ATCC
           27405]
 gi|255992168|gb|EEU02263.1| modification methylase, HemK family [Clostridium thermocellum DSM
           2360]
 gi|281407705|gb|EFB37964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum JW20]
 gi|316939124|gb|ADU73158.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum DSM 1313]
          Length = 302

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 143/275 (52%), Gaps = 26/275 (9%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LCRV  +    +    D  + + +    T  +   +K + +  I G ++F ++   ++ 
Sbjct: 29  LLCRVLNVDRSYLYSHDDYNMTEEEYKKFTLFLEERIKGKPLQYITGHQEFMSLDFIVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126
           D   PR +TE LV++ L     +    +  RILD+GTG+G + ++L   LK+S   + + 
Sbjct: 89  DVLIPRQDTETLVEAVLTHV--KSTGLENARILDIGTGSGCIAVSLAHFLKDS---RVLA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----------------EGLFDVIV 169
           +DIS KALEIA++NA   GV +R   L+ D    +                 EG FD+IV
Sbjct: 144 LDISEKALEIAETNAKRCGVWDRMFFLKGDALEGLAGIIAQSPFAKDFERKGEGFFDIIV 203

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI S  +  L  +V+D++PR +LDGGIDGL  YR I    ++ L+ D L + E+GY
Sbjct: 204 SNPPYIPSEEIKTLHKQVKDYEPRTALDGGIDGLDFYRAITCEAAKLLSTDSLLAFEVGY 263

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           NQ  +V   F       +   KD  G DRV++ CR
Sbjct: 264 NQAENVSE-FMKESFSAIKVVKDLAGIDRVVMGCR 297


>gi|237745911|ref|ZP_04576391.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
 gi|229377262|gb|EEO27353.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
          Length = 287

 Score =  142 bits (358), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/255 (37%), Positives = 137/255 (53%), Gaps = 14/255 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    G S  ++I   D VL D +   +++ + R L+ E +  I G R+FY +   ++ 
Sbjct: 35  LLEHALGFSRVKLITHSDHVLTDAEANAVSDVLARRLRGEPVAYITGIREFYGLPFAVTP 94

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETELLVD ALA  LP     +  R++DLGTG+GA+ +A+    P  +    DI
Sbjct: 95  DVLIPRPETELLVDLALA-RLP-----EGGRVVDLGTGSGAIAVAIAAMRPDAQVWATDI 148

Query: 130 SCKALEIAKSNAVT---NGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
           S KAL+IA+ NA +   NG S RF   Q +W+ ++E    FD+IVSNPPYI S       
Sbjct: 149 SGKALDIARKNAASCLKNGQSVRFR--QGNWYEALEPGSRFDLIVSNPPYIHSADEHLRK 206

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L    DGLS    + D    +L K G   +E GYNQ   V +    +K 
Sbjct: 207 GDLR-FEPLSALTDYTDGLSAMDILIDQAPAYLKKGGELLMEHGYNQSGAVRKKLVDKKY 265

Query: 245 FLVNAFKDYGGNDRV 259
             V ++KD  G +RV
Sbjct: 266 LQVQSWKDLAGIERV 280


>gi|160878571|ref|YP_001557539.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium phytofermentans ISDg]
 gi|160427237|gb|ABX40800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium phytofermentans ISDg]
          Length = 279

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 136/257 (52%), Gaps = 13/257 (5%)

Query: 6   DSHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L  VTGL    + +    D  ++  +R+     + +   H  +  + G ++F  +
Sbjct: 28  DAWYLLEHVTGLRRIDYMIRAKEDMSIEVYERY--QQLLKKRALHIPLQYLTGSQEFMGL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PR +TE LV+  L  S    + +DV   L+L TG+G + ++L K      
Sbjct: 86  SFRVNESVLIPRQDTERLVEEVLKVS----KDKDV---LELCTGSGCIIISLAKLGNIKN 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V VDIS  A+++AK NA  N V   +  L SD FS+V G +DVIVSNPPYIES +++ L
Sbjct: 139 AVAVDISSDAIKVAKENAKDNEVLVTY--LLSDMFSNVSGTYDVIVSNPPYIESEVIEGL 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV+D +PRI+LDG  DGL  YR +A    R LNK+G   +EIG NQ   +  +     
Sbjct: 197 MPEVKDHEPRIALDGDADGLKFYRILAKESGRFLNKNGRLYLEIGCNQAAFIGELLSQNG 256

Query: 244 LFLVNAFKDYGGNDRVL 260
              +   KDY G DRV+
Sbjct: 257 FAQIKVVKDYAGLDRVV 273


>gi|315651890|ref|ZP_07904893.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM
           3986]
 gi|315485892|gb|EFU76271.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM
           3986]
          Length = 281

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 138/236 (58%), Gaps = 14/236 (5%)

Query: 30  LDDRQRF-FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           + DR++   L + + + L++  I  IL    F      +      PR +TE+LV+  L  
Sbjct: 49  IKDREKLDILESYVSKRLENMPIQYILNKAYFCGFPFFVDKSVLIPRFDTEVLVEEIL-- 106

Query: 89  SLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              RI K D   +ILD+ TG+GA+ ++L K   F +   VDIS  ALEIAK NAV  G  
Sbjct: 107 ---RIAKGDKNKKILDMCTGSGAIAISLKKLGGFERVDAVDISNDALEIAKKNAVGLGCD 163

Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             F   +SD FS +  E  +D+IVSNPPYI+S +VD L  EV+DF+PR++LDG IDG+  
Sbjct: 164 INFS--KSDMFSGLTSENKYDIIVSNPPYIKSHMVDSLESEVKDFEPRLALDGDIDGMKF 221

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Y+ I +   ++LN +G+ ++EIGY++  D+ ++F+    F +N  KD    DRV +
Sbjct: 222 YKIIKENFIKYLNPEGILALEIGYDEAKDIRKLFDG---FDINIKKDLSNLDRVAI 274


>gi|114319434|ref|YP_741117.1| HemK family modification methylase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225828|gb|ABI55627.1| [protein release factor]-glutamine N5-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 295

 Score =  142 bits (357), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 121/219 (55%), Gaps = 6/219 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L  E +  + G R F+++ L ++++T  PRPETELLV++ALA    R++    +R+
Sbjct: 76  LARRLAGEPVAHLTGRRGFWSLELKVTAETLIPRPETELLVEAALA----RVDGDRQLRV 131

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTGTGA+ LAL  E P ++   V+ S  AL +A+ NA   G+++R   +   WF  +
Sbjct: 132 ADLGTGTGAIALALADECPAWRVTAVEASAGALVVARENARRLGLADRVQVVAGSWFGPL 191

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD++VSNPPY+     +    +VR F+PR +L  G DGL   R I      HL   
Sbjct: 192 AGERFDLVVSNPPYVGVHEPELYEGDVR-FEPRSALAAGRDGLGDLRRIVGEAPGHLVAG 250

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   VE G+ Q   V R+F       V   +D  G++RV
Sbjct: 251 GWLMVEHGFQQGEAVRRLFLEAGFGGVETLRDLAGHERV 289


>gi|237742324|ref|ZP_04572805.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429972|gb|EEO40184.1| methyltransferase [Fusobacterium sp. 4_1_13]
          Length = 370

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 128/222 (57%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+GTGA+ +A+  E       G+DI+ KA+E+A  N   N + E  + ++SD F  +
Sbjct: 187 LDIGSGTGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 245

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     HL  
Sbjct: 246 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEHLKD 305

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 306 TAYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347


>gi|121534883|ref|ZP_01666702.1| modification methylase, HemK family [Thermosinus carboxydivorans
           Nor1]
 gi|121306482|gb|EAX47405.1| modification methylase, HemK family [Thermosinus carboxydivorans
           Nor1]
          Length = 289

 Score =  141 bits (356), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G     + ++ D  L+  +      A+ + +    +  I G ++F  +  
Sbjct: 33  DAEVLLSHILGRDRLYLYLNYDQPLEPAELAAFREAVKKRVLRVPVAYITGHKEFMGLDF 92

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++SD   PRP+TE+LV++ALA    R+       +LDLGTG+GA+ ++LL       G+
Sbjct: 93  IVTSDVLVPRPDTEVLVEAALA----RLAGVSTPVVLDLGTGSGAIIVSLLHRLQAATGI 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
           GVDIS  AL +A++NA  +GV+ R    Q D F+ V G  FD IV+NPPYI    +  L 
Sbjct: 149 GVDISPGALAVARANAQKHGVAARLALKQGDLFAPVAGQAFDAIVANPPYIPDGDIAGLE 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +PR +L GG DGL  YR I      HL      +VE+G  Q   V  +     L
Sbjct: 209 PEVR-HEPRTALAGGADGLDFYRRIVAMAPGHLKDGAFLAVEVGCGQAAAVAGLAAVSGL 267

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
            +    +DY G +RV++  R
Sbjct: 268 GVEAVIRDYAGIERVVVMRR 287


>gi|221135299|ref|ZP_03561602.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Glaciecola sp. HTCC2999]
          Length = 286

 Score =  141 bits (356), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 129/256 (50%), Gaps = 8/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V   +   +   PD VL   Q+    + I +    + I  ILG+++FY    
Sbjct: 29  DAQCLLCAVLDCNRAYLHTWPDKVLSSTQQTEFLHFIEQRQTGKPIAYILGYQNFYGYDF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRPETE  VD  +A       K  + R+LDLGTGTGA+ L+++ + P  + +
Sbjct: 89  AVSPVTLIPRPETEQCVDLVIA-------KPYIKRVLDLGTGTGAIALSIILQRPELEVL 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD   +A+ +A+ NA            QSDWFS V+G FDVIVSNPPY+E         
Sbjct: 142 GVDFVPEAVMLAQQNAQNLAPKSNISFKQSDWFSHVDGRFDVIVSNPPYVEPDSPYLAKG 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++R F+P  +L    +GL+    I      +LN++GL  +E G+ Q  ++ ++       
Sbjct: 202 DIR-FEPNSALTAAENGLADIIRIVSEAKHYLNENGLVILEHGHTQGTEIRQLMTQNGFT 260

Query: 246 LVNAFKDYGGNDRVLL 261
            V    DY G  R+ L
Sbjct: 261 NVTTLCDYAGQHRITL 276


>gi|23015679|ref|ZP_00055448.1| COG2890: Methylase of polypeptide chain release factors
           [Magnetospirillum magnetotacticum MS-1]
          Length = 283

 Score =  141 bits (355), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS      V G+   ++     + L       L   + R    E +  ILG R F+    
Sbjct: 26  DSRLMAAEVLGVEMRRLPASHHAELSPEDAARLAAMLDRRAAREPMSHILGRRGFWTHDF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ DT +PRP+TE L+++ L      ++ R   +R++D GTGTG + L LL E     G
Sbjct: 86  LVTKDTLDPRPDTETLIEAVLGA----LDDRGRPLRLVDFGTGTGCILLTLLSELGHATG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+D S  AL +A  NA   G++ R      DW   ++G+FD+IVSNPPYI    +D L 
Sbjct: 142 LGIDASEAALAVAGDNAERLGLASRAQFRLGDWGWGLDGVFDIIVSNPPYIPDGDIDGLE 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV  ++PR +L GG DGL  YR +   ++R L   GL ++E+G  Q  DV  +  +  L
Sbjct: 202 PEVSRYEPRSALAGGADGLDCYRALIPHMARLLVPGGLAALEVGAGQASDVAAMLAAAGL 261

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D GG +R ++  R
Sbjct: 262 PGAGFRCDLGGIERCVIVQR 281


>gi|294782569|ref|ZP_06747895.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
 gi|294481210|gb|EFG28985.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
          Length = 382

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 127/222 (57%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+   + +  ILG  +FY +   +  +   PRP+TE+LV+  +   +  IE+ +   I
Sbjct: 144 MLRAKNRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       GVDI+  A+E+A  N V N V E  + ++SD F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGVDINEDAIELANENKVLNKV-ENVNFMKSDLFEKL 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++F+P+ +L    DGL  YR I+     +L  
Sbjct: 259 DEDFKYDLIVSNPPYITKEEYESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGY Q  DV +I E     +++  KDYGGNDRV+L
Sbjct: 319 TGYLAFEIGYKQAKDVSKILEDNNFAILSVVKDYGGNDRVVL 360


>gi|296116160|ref|ZP_06834778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977266|gb|EFG84026.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 291

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 122/221 (55%), Gaps = 4/221 (1%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           RSL HE +  + G   F+++ L +S  T  PR +TE LV++ L     R ++ D+  ILD
Sbjct: 71  RSL-HEPLSYLTGRAGFWSMTLDVSPATLIPRADTETLVEALLEL---RPDRTDISTILD 126

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTGTG + LA L+E P   G+GVD+S  A  +A  NA   G+S+R + +  +W  ++ G
Sbjct: 127 LGTGTGCLLLAALQEYPQAWGLGVDLSPDAARLALGNARNVGLSDRCNIICGNWAQAITG 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FDV+ SNPPYI    +  L  +VRD +P  +LDGG DGL  YR +   + R L   GL 
Sbjct: 187 RFDVVFSNPPYIPHADLSGLMPDVRDHEPHRALDGGDDGLVCYRILMQSLPRLLKPRGLG 246

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            VE+G  Q   V  +     + +V    D GG  R L+  R
Sbjct: 247 IVELGIGQDHSVPALARDAGMDIVAIRPDLGGVGRALIVRR 287


>gi|291532655|emb|CBL05768.1| [protein release factor]-glutamine N5-methyltransferase [Megamonas
           hypermegale ART12/1]
          Length = 293

 Score =  141 bits (355), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 134/260 (51%), Gaps = 1/260 (0%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G     + V  D  ++ ++       + +  +H  +  ILG R+F  +  
Sbjct: 32  DAEVLLSHVLGQKRIYLYVHFDEPMEAKELAKFREYVAKRARHIPVAYILGQREFMGLDF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ DT  PRP+TE+LV++ +A        +    I+D+GTG+GA+ L+LLK  P  KG 
Sbjct: 92  KVTKDTLIPRPDTEILVENTIAKVNENFGDKQSYDIVDIGTGSGAIILSLLKNLPKAKGF 151

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            VDIS   + +AK NA    V +R +    D F  V + +FDVIVSNPPYI    +  L 
Sbjct: 152 TVDISANVVAVAKENAQNLQVDDRCEFFVGDLFEPVKDKVFDVIVSNPPYIPQKDIATLE 211

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++V+D++P  +L    DGLS Y+ +     ++L   G  +VEIG  Q   V ++      
Sbjct: 212 IDVKDYEPLSALTDNKDGLSFYQRLFTQGMKYLKNGGFMAVEIGIYQAEPVKQMAIDNGW 271

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +   KDY G DRV+L  +
Sbjct: 272 QNIEIIKDYAGIDRVVLAWK 291


>gi|310659437|ref|YP_003937158.1| methyltransferase [Clostridium sticklandii DSM 519]
 gi|308826215|emb|CBH22253.1| Methyltransferase [Clostridium sticklandii]
          Length = 283

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 135/242 (55%), Gaps = 3/242 (1%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ +  +D+ +   +   I +      +  ILG R+F+ +   +S     PR +TE+L
Sbjct: 39  IMLNLEEDIDESKVEIIKTMIEKRKNSYPLQYILGEREFWGMDFNVSEGVLIPRQDTEIL 98

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++  L        K ++ +  ++G G+G + + LLKE      +GVDI+ KA+E+ K+NA
Sbjct: 99  IEETLKKLKNHKHKSNL-KGFEIGVGSGIISITLLKEIETLIMIGVDINDKAIELTKANA 157

Query: 142 VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             + VS+R   L S+ F  +  E  FD I+SNPPYIE+ ++D L  +++  +P+++LDGG
Sbjct: 158 SKHQVSDRLCILNSNLFEKINKENQFDFIISNPPYIETKVIDSLQEDIKQHEPKLALDGG 217

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR I +    +++ +G  + EIGYNQ   V +IF       V   KD  G DRV
Sbjct: 218 ADGLDFYRDIIEQSKHYISPEGFIAFEIGYNQAEAVKKIFVENGYQNVTIAKDLAGFDRV 277

Query: 260 LL 261
           ++
Sbjct: 278 VI 279


>gi|152979100|ref|YP_001344729.1| HemK family modification methylase [Actinobacillus succinogenes
           130Z]
 gi|150840823|gb|ABR74794.1| modification methylase, HemK family [Actinobacillus succinogenes
           130Z]
          Length = 286

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 143/265 (53%), Gaps = 10/265 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  +  Q+I   D+VLD++    LT  + R    E +  ILG  +F
Sbjct: 24  LNAKFDANLLLQSVTQKTKSQIIAFSDTVLDEKTLQNLTALLNRRATGEPVAYILGETEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-- 118
           + + L +S  T  PRP+TE+LV+ AL     RI  +D V +LDLGTGTGA+ L+L KE  
Sbjct: 84  WTLSLKVSPHTLIPRPDTEILVERALE----RIPLKDGVSVLDLGTGTGAIALSLAKELK 139

Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                +  +GVD+  +A+ +A+ NA  N + +  +  +S WF+++   FD++VSNPPYI+
Sbjct: 140 KRGQKYWVLGVDLMPEAVVLAQRNAERNQLDD-VEFRRSSWFNNIHETFDLVVSNPPYID 198

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L     G +  R I +   R+LN  G   +E G+ Q   V 
Sbjct: 199 ADDAHLTQGDVR-FEPLSALIAEEQGYADLRHIIEQTPRYLNPQGWLLLEHGWRQGEKVR 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
             F+      V   KDYG N+RV L
Sbjct: 258 SFFDENLWEKVATVKDYGDNERVTL 282


>gi|328473484|gb|EGF44332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus 10329]
          Length = 285

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFDALLARRLAGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + +
Sbjct: 89  KVSPTTLIPRPDTERLVEVALDKTYGQ-----TGSILDLGTGTGAIALALASELPSRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDC 182
           GVD+  +A E+A+ NA    +    FD  Q  WF  + EG  F +IVSNPPYI+      
Sbjct: 144 GVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMSGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281


>gi|322434295|ref|YP_004216507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX9]
 gi|321162022|gb|ADW67727.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX9]
          Length = 282

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 124/239 (51%), Gaps = 6/239 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   L    G+ S  +   P+  +D  Q+     AI R L  E I  ILG ++FY 
Sbjct: 24  ALADAAILLTHTLGIDSTTLRAHPERPIDRDQQAVYQRAIERRLTFEPIQYILGTQEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETE LV++  A    R+     VRILD+GTG+GA+ +AL    P  
Sbjct: 84  LPFRVTPAVLIPRPETEHLVEAVAA----RVPHNRPVRILDVGTGSGAIAIALAHLLPHA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
               +DIS +A+EIA+ NA TN ++ R D  QSD F++V     F  IVSNPPYI     
Sbjct: 140 HITALDISPEAIEIAQENARTNHLAARIDFQQSDLFTAVTKGPPFAAIVSNPPYIPLSDS 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           + L  +VRD++P  +L  G  G   Y  +       L  +GL ++EIG  Q+  +  + 
Sbjct: 200 ESLHPQVRDYEPHQALFSGPTGFEVYERLIIQAPSLLLPNGLIALEIGQGQQPRMAELL 258


>gi|28897518|ref|NP_797123.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364111|ref|ZP_05776831.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus K5030]
 gi|260879266|ref|ZP_05891621.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AN-5034]
 gi|260897558|ref|ZP_05906054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus Peru-466]
 gi|260903528|ref|ZP_05911923.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AQ4037]
 gi|28805730|dbj|BAC59007.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308086348|gb|EFO36043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus Peru-466]
 gi|308089666|gb|EFO39361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AN-5034]
 gi|308110852|gb|EFO48392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AQ4037]
 gi|308114222|gb|EFO51762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus K5030]
          Length = 285

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFNALLARRLAGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + +
Sbjct: 89  KVSPTTLIPRPDTERLVEVALDKTYGQ-----TGSILDLGTGTGAIALALASELPNRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDC 182
           GVD+  +A E+A+ NA    +    FD  Q  WF  + EG  F +IVSNPPY++      
Sbjct: 144 GVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVSNPPYVDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMRGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281


>gi|288942096|ref|YP_003444336.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Allochromatium vinosum DSM 180]
 gi|288897468|gb|ADC63304.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Allochromatium vinosum DSM 180]
          Length = 293

 Score =  140 bits (354), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 129/248 (52%), Gaps = 7/248 (2%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
           TG +   ++  P+    D         + R L  E I  I G ++F+ + L ++ DT  P
Sbjct: 45  TGWTRTSLLAWPERAPPDEAVATFEALLARRLTGEPIAYIRGRQEFWTLELRVTPDTLIP 104

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+     +L R++ +  +RI DLGTG+GA+  AL  E P +  V  D S  AL
Sbjct: 105 RPETEQLVE----LALDRLDAQRPLRIADLGTGSGAIAAALASERPDWSLVATDRSAAAL 160

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A+ N  T G+ ER   L+ DW +++  G  D I+SNPPY+          + R F+PR
Sbjct: 161 AVARDNFRTLGL-ERIGCLRMDWLAALASGSLDAILSNPPYVAGQDPHLDRGDPR-FEPR 218

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L  G DGL   RTIA    R L   GL +VE G++Q   V RIF S  L  V   +D 
Sbjct: 219 SALTPGGDGLDAIRTIAAETGRCLRPGGLLAVEHGFDQGDAVRRIFASAGLHRVETCRDL 278

Query: 254 GGNDRVLL 261
            G DRV L
Sbjct: 279 AGLDRVTL 286


>gi|119945324|ref|YP_943004.1| modification methylase, HemK family protein [Psychromonas
           ingrahamii 37]
 gi|119863928|gb|ABM03405.1| modification methylase, HemK family protein [Psychromonas
           ingrahamii 37]
          Length = 279

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 140/262 (53%), Gaps = 14/262 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   L  V    +  ++  P+  L   Q+      I + +K   +  + G R+F++
Sbjct: 20  ALLDAQVLLAFVLEKETVYLMTWPERELSQAQKSAFEGLISQRVKGVPVAHLTGAREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TELLV++AL +           RILDLGTG+GA+ LAL  E P  
Sbjct: 80  LPLKVNNSTLIPRPDTELLVEAALDYCSAD------ARILDLGTGSGAIILALASELPDA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEGLFDVIVSNPPYIESVI 179
             +GVD++  A+++A    + NG + + + +   QS+WF ++ GLFDV+VSNPPYIE   
Sbjct: 134 YCLGVDVNESAVQLA----IENGKNLKLNNVHFQQSNWFDNINGLFDVVVSNPPYIEKND 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P  +L    +GL+  R IA     +L K G   VE G+NQ   V  +F
Sbjct: 190 HHLKLGDVR-FEPLSALVADENGLADIRKIAQKTPEYLKKGGYLLVEHGFNQGSTVRELF 248

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  V   KDYG NDRV +
Sbjct: 249 TDLGYSEVITIKDYGDNDRVTM 270


>gi|114766146|ref|ZP_01445150.1| modification methylase, HemK family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541606|gb|EAU44648.1| modification methylase, HemK family protein [Roseovarius sp.
           HTCC2601]
          Length = 282

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 131/259 (50%), Gaps = 16/259 (6%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYN 62
           RD+   L  V  +   ++ +  PD V  + +   L NA++ S   H  +  I G R FY 
Sbjct: 24  RDARRLLAHVLKVPPGRLTLFLPDPV--ESEHALLFNAVIESRAAHVPVSHITGRRQFYG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ +  +PRPETE+L+++ALA            R+LDLGTG+G + L LL E    
Sbjct: 82  REFLVTPEVLDPRPETEILIEAALAGPF--------SRVLDLGTGSGCILLTLLCEREGA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV 178
            G+G D+S +ALE+A  N     +  R    +  WF ++       FD+IVSNPPYI   
Sbjct: 134 TGIGTDLSEEALEVAFWNRNALRLEARAALARGSWFGALGEDDRERFDLIVSNPPYIALD 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +D L  EVRD +PR++L    DGL+ YR IA G   HL   G   VEIG +Q   V  +
Sbjct: 194 EMDDLSPEVRDHEPRMALTDEGDGLTAYRMIAAGAPSHLLPGGRLMVEIGPSQGAAVADL 253

Query: 239 FESRKLFLVNAFKDYGGND 257
           F S  L  V    D  G D
Sbjct: 254 FRSAGLQEVAVITDLDGRD 272


>gi|239948111|ref|ZP_04699864.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922387|gb|EER22411.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 420

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 26/267 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAEIEAFEKLLKRRLKHEPIAYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSALAFSLP--RIEKRDVV-----------------------RILDLGTGTGAVCLALL 116
           V   L    P  R  +R V                        +IL+LGTG+G + ++LL
Sbjct: 103 VRIVLGLLKPSLRATERSVAISGILPEIASSTPMASSRNDEYTKILELGTGSGCIAISLL 162

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
            E P    +  DIS  A+EI KSNA    V +R   + SDWF ++ +  FD+IVSNPPYI
Sbjct: 163 CELPNANVIATDISLDAIEIIKSNAAKYEVMDRLQVIHSDWFENLGKQKFDLIVSNPPYI 222

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  + +E  +++P I+L    DGL  Y+TIA    + L  +G   +EIG+ Q+  V
Sbjct: 223 SHSEKSEMAIETINYEPSIALFAEEDGLQCYKTIAGNAKQFLKPNGKIILEIGFKQEEAV 282

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +IF  +   + N ++D  G  RV+LF
Sbjct: 283 TQIFLDQSYNIENVYRDLQGYSRVILF 309


>gi|293392124|ref|ZP_06636458.1| protein methyltransferase HemK [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952658|gb|EFE02777.1| protein methyltransferase HemK [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 299

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++    LT  + R L+ E I  ILG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALL----- 116
            +S+ T  PRP+TE+LV+ A+A ++ +++K        RILDLGTGTGA+ LAL      
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKS 145

Query: 117 ---KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
              K +     +GVD++ + + +AKSN   N ++  F  +QS WF +V G FD+I+SNPP
Sbjct: 146 IAQKHAVQLDIIGVDLTPEVVALAKSNGAKNQLNVTF--VQSRWFENVTGTFDLILSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L    +G +  R I     + + ++G   VE G+ Q  
Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      V   +DYG N+RV L C
Sbjct: 263 KVRSIFQGNFWSAVETLRDYGNNERVTLGC 292


>gi|300723055|ref|YP_003712353.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297629570|emb|CBJ90173.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus nematophila ATCC 19061]
          Length = 286

 Score =  140 bits (352), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   ++++   +   L + + R ++ E I  I+G R+F+++ 
Sbjct: 22  RDAEILLQYVTGCSRTYLIAFSETLISPEEAHQLDSMLARRIRGEPIAYIVGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        +ILDLGTGTGA+ LAL  E      
Sbjct: 82  LAVSPATLIPRPDTECLVEKALEL-LP----DSPAQILDLGTGTGAIALALASERHDCHV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            GVDI+  A+ +AK NA  N     F   + LQS+WF+ V    FD+IVSNPPYI+    
Sbjct: 137 TGVDINPDAVALAKRNAERNTEKLPFHYVNFLQSEWFAEVGHRQFDMIVSNPPYIDEADP 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    +G++  +TI +     L  +G   +E G+ Q   V  +F 
Sbjct: 197 HLREGDVR-FEPATALIAAQNGMADLQTIVEQARHFLLPNGWLLLEHGWKQGTVVRNLFL 255

Query: 241 SRKLFLVNAFKDYGGNDRV 259
            +    +  F+DYGGN+R+
Sbjct: 256 EKGYQRIATFQDYGGNERI 274


>gi|91206058|ref|YP_538413.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii RML369-C]
 gi|122425238|sp|Q1RH40|HEMK_RICBR RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|91069602|gb|ABE05324.1| Methylase of polypeptide chain release factors [Rickettsia bellii
           RML369-C]
          Length = 556

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 23/262 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ +P+  L+  +   +   + R LKHE I  ILG ++FY+    ++     PR +TE+L
Sbjct: 43  LLANPEKQLNQLEIEAVEKVLERRLKHEPIAYILGTKEFYSREFIVNKHVLIPRNDTEIL 102

Query: 82  VDSALAFSLPR-------------------IEKRDVVR---ILDLGTGTGAVCLALLKES 119
           +D  L +                       ++ R+ ++   IL+LGTG+G + ++LL E 
Sbjct: 103 IDVVLQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSSNILELGTGSGCISISLLLEL 162

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
           P  +    DIS  A+E+AKSNA+ + V++R   + S+WF ++ +  FD+IVSNPPYI   
Sbjct: 163 PNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFENIGKQKFDLIVSNPPYISIN 222

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               + +E  +++P I+L    DGL  Y+ IA+   + L ++G   +EIGY Q   V +I
Sbjct: 223 EKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLKQNGKIILEIGYKQADQVSQI 282

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F      + N  +D   ++RV+
Sbjct: 283 FLDHGYVIDNIHQDLQSHNRVI 304


>gi|197301353|ref|ZP_03166434.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC
           29176]
 gi|197299510|gb|EDY34029.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC
           29176]
          Length = 306

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 13/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG+      ++PD  ++          +    +H  +  I G ++F  +  
Sbjct: 37  DAWYLLEFVTGVDKAHYYMNPDRRMEQSVAQEYEKVVKLRTEHIPLQHITGVQEFMGLEF 96

Query: 66  TLSSDTFEPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
            +S D   PR +TE+LV+ AL       +P+  +++ VR+LDL TG+G + +++L    K
Sbjct: 97  QVSGDVLIPRQDTEVLVEEALKLLEQEKVPK--EKETVRMLDLCTGSGCILISILYYAAK 154

Query: 118 ESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           E    +G G DIS  AL IA+ N      NG     + L+SD F  V+G F +IVSNPPY
Sbjct: 155 EKIQIQGTGADISEAALRIAEENLDLLEKNGNKGMAELLESDLFEQVDGTFGMIVSNPPY 214

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I++ ++  L  EVR  DP ++LDG  DGL  YR I +    +L K+G+   EIGY+Q   
Sbjct: 215 IKTSVISGLQEEVRLHDPFLALDGKEDGLFFYRKIIEESRAYLQKNGVLLFEIGYDQGEA 274

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           V  +        V   KD  G DR++
Sbjct: 275 VSELMTKEGYGQVVVKKDLAGLDRIV 300


>gi|34763569|ref|ZP_00144504.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27886758|gb|EAA23896.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 370

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+E+A  N   N + E  + ++SD F  +
Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 245

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 246 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347


>gi|162147701|ref|YP_001602162.1| HemK protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542325|ref|YP_002274554.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786278|emb|CAP55860.1| putative hemK homolog protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209530002|gb|ACI49939.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 293

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 5/239 (2%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           S +D  +       + R   HE +  I G   F+++ L  +  T  PR ++E LV++ LA
Sbjct: 57  SAMDAAEHRSFVALVARRAAHEPMAYITGRAGFWSLDLETAPATLIPRADSETLVEALLA 116

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               R ++  V  ILDLGTGTG + LA L E P   G+GVDI   A  +A  NA   G+ 
Sbjct: 117 Q---RPDRGAVRTILDLGTGTGCLLLAALSEYPDAWGLGVDIDPDAAHLAARNARRTGLR 173

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +R   L +DW +++ G FDV+ SNPPYI    +  L  +VRD +P  +LDGG DGL  YR
Sbjct: 174 DRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAGLMPDVRDHEPARALDGGTDGLDAYR 233

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF--CR 264
            +   +   L   G+   EIG  Q+  +  +     L +V    D GG  R +L   CR
Sbjct: 234 LLTGALPSLLAHGGIAIFEIGIGQERSMPDLARQAGLDIVGIRTDLGGIPRAVLMQQCR 292


>gi|126462319|ref|YP_001043433.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103983|gb|ABN76661.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC
           17029]
          Length = 278

 Score =  139 bits (351), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   +     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLMAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALAEPF--------ATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   G + R +   SDWF++V    D+I+SNPPYI +  +D
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGAASRLELRLSDWFAAVPERVDLILSNPPYIAADEMD 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 TLAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V+   D  G DR++
Sbjct: 253 AGLARVSVLPDLDGRDRLV 271


>gi|294010050|ref|YP_003543510.1| methylase of polypeptide chain release factors [Sphingobium
           japonicum UT26S]
 gi|292673380|dbj|BAI94898.1| methylase of polypeptide chain release factors [Sphingobium
           japonicum UT26S]
          Length = 275

 Score =  139 bits (350), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 123/223 (55%), Gaps = 14/223 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R L  E I  I G RDF+ + L ++ D   PRP++E L+++AL    PR       RI
Sbjct: 57  IQRRLTGEPIAYITGTRDFWTISLHVTPDVLIPRPDSETLIEAALDHFGPR----SPARI 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ LA L + P   G GVDIS  A+ +A+ NA   G+  R +    DW   +
Sbjct: 113 LDLGTGSGALLLAALSQWPQATGTGVDISPAAVAVAQGNADRLGLGGRANFRLGDWAEGM 172

Query: 162 EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            G FD+I+ NPPYI    ++  D L       +P  +L  G +GL  YR IA  + R L 
Sbjct: 173 GGPFDLILVNPPYIARDAALAGDVL------HEPETALFAGAEGLDDYRRIAPALPRLLA 226

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             G+ ++EIG++Q++ V  +   + L  V+  +D  G+DR L+
Sbjct: 227 PGGMAAMEIGHDQRLSVSALLADQGLG-VSPRRDLAGHDRCLV 268


>gi|257870910|ref|ZP_05650563.1| modification methylase HemK [Enterococcus gallinarum EG2]
 gi|257805074|gb|EEV33896.1| modification methylase HemK [Enterococcus gallinarum EG2]
          Length = 278

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 118/217 (54%), Gaps = 8/217 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H     +LG+ +FY  R  ++ DT  PRPETE LV    A  L + E  + +R++D+G
Sbjct: 65  LAHRPPQYLLGYEEFYGHRFKVTEDTLIPRPETEELV----ALCLEQTEPAENLRVVDIG 120

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164
           TGTGA+ ++L    P ++   VD+S  AL +AK NA   G    F   Q D  + V +  
Sbjct: 121 TGTGAIAVSLKLARPHWQIAAVDLSEAALAVAKENAAQLGAEVAF--YQGDTLTPVGDQS 178

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IVSNPPYI     + +   VR F+P+++L    +GL  YR IAD   + L  DG   
Sbjct: 179 WDIIVSNPPYISEQEWELMDASVRQFEPQMALFAAENGLVMYRKIADQAKKLLTPDGKIF 238

Query: 225 VEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           VEIG+ Q   V RIF E+     V   +D  G DR++
Sbjct: 239 VEIGFQQGKSVQRIFAEAFPDKKVTVIQDLSGKDRLV 275


>gi|322517016|ref|ZP_08069905.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           vestibularis ATCC 49124]
 gi|322124433|gb|EFX95930.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           vestibularis ATCC 49124]
          Length = 277

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 14/219 (6%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    ILG+ DF+ +R  +      PRPET+ LVD  LA + P  E    ++ILD+GTG
Sbjct: 65  HKPAQYILGYEDFHGLRFQVDERVLIPRPETKELVDLILAEN-PSSE----LKILDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ ++L K  PF++    D+S  AL +AK NA  N V   F  +QSD F ++ G FD+
Sbjct: 120 SGAISVSLKKSCPFWQVTASDLSADALVLAKENAKLNQVDISF--VQSDVFENISGSFDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI     D +GL V   +P+++L    +GL+ YR I +  +++L   G    EI
Sbjct: 178 IVSNPPYISENDKDEVGLNVLTSEPKMALFADEEGLAIYRQIIEDATKYLTPKGKLYFEI 237

Query: 228 GYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           GY Q +D+ R+    F  +    V   KD  G DR+++ 
Sbjct: 238 GYKQGLDLKRLLSLHFPDKH---VRVLKDQFGQDRMVVM 273


>gi|58038520|ref|YP_190484.1| HemK family protein [Gluconobacter oxydans 621H]
 gi|58000934|gb|AAW59828.1| HemK family protein [Gluconobacter oxydans 621H]
          Length = 282

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   LC  TG      ++  D V +  Q      A+ R L+ E +  I G   F+ 
Sbjct: 24  ARREARLLLCWATG-RDLGGLLSLDGV-EPAQELRFAEALKRRLEREPLAFITGETGFWT 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L    DT  PR ++E L++ AL  + P  ++   + ILDLGTGTG + LA L E P  
Sbjct: 82  LDLETGRDTLIPRADSEALIE-ALLDACP--DRSAPLSILDLGTGTGCLLLAALSEYPQA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GVGVD+S +A  +AK N+V  G+ +R   L   W  ++ G FDV++SNPPYIES  +  
Sbjct: 139 RGVGVDLSPQAAALAKRNSVRTGLEKRSAFLAGSWADALTGRFDVVLSNPPYIESGDLAG 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  ++P  +LDGG DGL  YR +   +   L + G   +E+G  Q   V  +  + 
Sbjct: 199 LMPEVLQYEPARALDGGADGLDAYRILCAALPGLLVRGGYAILEMGIGQIDAVSALGTAS 258

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            L  V    D GG +R L+ 
Sbjct: 259 GLRDVAHKADLGGIERALVL 278


>gi|229826187|ref|ZP_04452256.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC
           49176]
 gi|229789057|gb|EEP25171.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC
           49176]
          Length = 283

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 138/262 (52%), Gaps = 14/262 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L +V+GL+  +  +  D  +D+ +       I R  +   +  ++G RDF 
Sbjct: 26  EAELDARYILEKVSGLNRAEYFLHSDDKIDNDKTEEFLRLIERRSERIPLSYVIGTRDFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKES 119
            +   ++ +   P  ETELL +  +     +        +LD+ TG+G  A+ ++LL E 
Sbjct: 86  GLTFKVNENVLIPEQETELLAEEVIKHCKGKT-------VLDMCTGSGCIAISVSLLGEP 138

Query: 120 PFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
              +    DIS KALE+AK NA   N  + +F  ++ D F ++ G FD+IVSNPPYIE+ 
Sbjct: 139 S--EVTASDISDKALEVAKENAEFLNASTVKF--IKGDLFENITGSFDIIVSNPPYIETR 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +++ L  EVRD+ PR++LDG  DGL  Y+ I     ++LNK+     EIGYNQ   V  I
Sbjct: 195 VIEELEPEVRDYIPRLALDGDEDGLKFYKNITKKAIKYLNKNARIFYEIGYNQSEAVTDI 254

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                   +   KDY G DR++
Sbjct: 255 LLENGFEEIKIIKDYSGLDRIV 276


>gi|262068282|ref|ZP_06027894.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378020|gb|EFE85538.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 382

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+   + +  ILG  +FY +   +  +   PRP+TE+LV+  +   +  IE+ +   I
Sbjct: 144 MLRAKSRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       GVDI+ +A+++A  N + N V E  + ++SD F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGVDINEEAIKLANENKILNKV-ENINFMKSDLFEKL 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++F+P+ +L    DGL  YR I+     +L +
Sbjct: 259 DEDFKYDLIVSNPPYITKEEYESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKE 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGY Q  DV +I E     +++  KDYGGN+RV+L
Sbjct: 319 SGYLAFEIGYKQAKDVSKILEDNGFAILSVVKDYGGNNRVVL 360


>gi|312863896|ref|ZP_07724134.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus vestibularis F0396]
 gi|311101432|gb|EFQ59637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus vestibularis F0396]
          Length = 277

 Score =  138 bits (348), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 124/219 (56%), Gaps = 14/219 (6%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    ILG+ DF+ +R  +      PRPET+ LVD  LA + P  E    ++ILD+GTG
Sbjct: 65  HKPAQYILGYEDFHGLRFQVDERVLIPRPETKELVDLILAEN-PSSE----LKILDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ ++L K  PF++    D+S  AL +AK NA  N V   F  +QSD F ++ G FD+
Sbjct: 120 SGAISVSLKKSCPFWQVTASDLSADALVLAKENAKLNQVDISF--VQSDVFENISGSFDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI     D +GL V   +P+++L    +GL+ YR I +  +++L   G    EI
Sbjct: 178 IVSNPPYISENDKDEVGLNVLTSEPKMALFADEEGLAIYRQIIEDATKYLTPKGKLYFEI 237

Query: 228 GYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           GY Q +D+ R+    F  +    V   KD  G DR+++ 
Sbjct: 238 GYKQGLDLKRLLSLHFPDKH---VRILKDQFGQDRMVVM 273


>gi|322373125|ref|ZP_08047661.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C150]
 gi|321278167|gb|EFX55236.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C150]
          Length = 277

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 131/229 (57%), Gaps = 15/229 (6%)

Query: 38  LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L ++I   LK H+    ILG+ DF+ +R  +      PRPETE LV+  LA + P+ E  
Sbjct: 54  LLSSIFNQLKAHKPAQYILGFEDFHGLRFQVDKRVLIPRPETEELVELILAEN-PKTE-- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LD+GTG+GA+ ++L +  P ++    D+S  ALE+A+ NA  N V   F  +QSD
Sbjct: 111 --LKVLDIGTGSGAIAVSLKESCPLWQVTASDLSVDALELARENAKLNRVDISF--IQSD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F ++ G FD+IVSNPPYI     + +GL V   +P+++L    DGL+ YR I +  ++H
Sbjct: 167 VFENISGSFDIIVSNPPYISENDKNEVGLNVLTSEPKLALFADEDGLAIYRQIIERAAKH 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLL 261
           L+  G    EIGY Q  D+ ++    F  +    V   KD  G DR+++
Sbjct: 227 LSPQGKLYFEIGYKQGSDLKKLLSLHFPDK---CVRVLKDQFGQDRMVV 272


>gi|254515299|ref|ZP_05127360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium NOR5-3]
 gi|219677542|gb|EED33907.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium NOR5-3]
          Length = 278

 Score =  138 bits (348), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/206 (40%), Positives = 116/206 (56%), Gaps = 7/206 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG RDF+ + LT++  T  PRP+TELLV+ ALA  LP     +   +LDLGTG+GA+ L
Sbjct: 70  LLGTRDFWTLSLTVNEATLIPRPDTELLVEQALALELP-----ESATVLDLGTGSGAIAL 124

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL  E P ++ +GV+ S +AL +A  NA   G+ +    L SDWFS V G FD+IVSNPP
Sbjct: 125 ALATERPQWRVLGVERSPEALAVAIDNARQLGL-DSVQWLSSDWFSQVVGRFDLIVSNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI          ++R F+PR +L  G DGL   R I      HL   G   +E G+ Q  
Sbjct: 184 YIADQDAHLATGDLR-FEPRSALASGSDGLDDIRKIIARSPDHLEPGGHLLLEHGFEQAP 242

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259
            V  +  +     V ++ D  G++RV
Sbjct: 243 AVRALLTATGFANVASYDDLAGHERV 268


>gi|261867617|ref|YP_003255539.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412949|gb|ACX82320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 299

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++    LT  + R L+ E I  ILG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALL----- 116
            +S+ T  PRP+TE+LV+ A+A ++ +++K        RILDLGTGTGA+ LAL      
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKP 145

Query: 117 ---KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
              K +     +GVD++ + + +AKSN   N ++  F  +QS WF +V G FD+I+SNPP
Sbjct: 146 IAQKHTVQLDIIGVDLTPEVVALAKSNGEKNQLNVAF--VQSCWFENVTGTFDLILSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L    +G +  R I     + + ++G   VE G+ Q  
Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      V   +DYG N+RV L C
Sbjct: 263 KVRSIFQENFWSAVETLRDYGNNERVTLGC 292


>gi|258645289|ref|ZP_05732758.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM
           15470]
 gi|260402639|gb|EEW96186.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM
           15470]
          Length = 288

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 137/262 (52%), Gaps = 9/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  V G S   +  + + +L  ++       I + ++  S   I+G ++F  + L
Sbjct: 31  DSEILLSHVLGKSRIYLYTEFERILAAKELALFKKYIQKRIEGFSAAAIIGKKEFMGLTL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TE  ++  + +          +++ DLGTG+GA+ +  L       GV
Sbjct: 91  KVNEQVLIPRPDTETWLEKVIQY----YRNETGLKVADLGTGSGAILVGFLYYCRDAVGV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
           GVDIS +AL+IA+ N     +++R +  Q D+  +   E +FD I SNPPYI +  +  L
Sbjct: 147 GVDISTEALKIAEENGQNLKLTDRVEWRQGDYLKAFDEEDIFDGIFSNPPYIPTKDIGGL 206

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESR 242
             EV+  +PR++LDGG DGL  Y  +A G + HL   G  +VE G  Q  D++ +F +S 
Sbjct: 207 PGEVKH-EPRLALDGGTDGLYFYHLLAKGAAEHLKPGGFLAVEFGIGQATDILEMFRKSA 265

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
           +       KDYGG +R  L+CR
Sbjct: 266 QYEDFEVIKDYGGIERA-LYCR 286


>gi|312865012|ref|ZP_07725240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus downei F0415]
 gi|311099123|gb|EFQ57339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus downei F0415]
          Length = 276

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 123/221 (55%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L HE    ILG+  F++++L +      PRPET  LVD  LA +       + + +LD
Sbjct: 61  RLLAHEPAQYILGYETFHDLKLKVDKRILIPRPETAELVDLILAEN-----ADEQLDLLD 115

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+GA+ LAL  E P ++ V  DIS +AL++AK NA  N ++   D  QSD FS +  
Sbjct: 116 IGTGSGAIALALAHERPTWRIVASDISQEALDLAKENAQANQIA--VDFCQSDLFSQLSV 173

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +D+IVSNPPYI       +GL V   +P ++L    +GL+ YR +A    +HL  DG  
Sbjct: 174 SYDIIVSNPPYISEADKAEVGLNVLTSEPHLALFADEEGLAIYRKLAQQAGKHLKADGKI 233

Query: 224 SVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            +EIGY Q   V ++F  R+ F    V    D  G DR+++
Sbjct: 234 YLEIGYKQGQIVSQLF--REAFPDKRVRVLPDQFGQDRMVV 272


>gi|254302819|ref|ZP_04970177.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323011|gb|EDK88261.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 383

 Score =  138 bits (347), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 11/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +         RD+   
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQLM------RDIEEP 197

Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG+GA+ +A+  E       G+DI+ KAL++A  N + N + E  + ++S+ F 
Sbjct: 198 NILDIGTGSGAISIAIANELKSSSVTGIDINEKALKLANENKILNKI-ENVNFIESNLFE 256

Query: 160 SVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L
Sbjct: 257 KLDKDFKYDLIVSNPPYISKEEYEILMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYL 316

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              G  + EIGYNQ  DV +I +     +++  KDYGGNDRV++
Sbjct: 317 KDTGYLAYEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 360


>gi|226329847|ref|ZP_03805365.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198]
 gi|225200642|gb|EEG82996.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198]
          Length = 282

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 139/256 (54%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT  +   ++   +++L   +   L+  + R +K E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTQRARTYLMAFNETLLSQDELTQLSQLLTRRIKGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP     + + ILDLGTGTGA+ LA+  E P    
Sbjct: 82  LKVSPATLIPRPDTECLVEQALE-KLP----TEPITILDLGTGTGAIALAMASERPDCHI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
           +GVD   +A+ +A+ NA    ++   + ++S WFSS+ G  F +I+SNPPYI+       
Sbjct: 137 IGVDFQAEAVALAQENATRLALNNT-EFMESCWFSSLSGYQFGMIISNPPYIDENDEHIH 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G +G +    I +   + L   G   +E G+ Q   V +IF  + 
Sbjct: 196 QGDVR-FEPLTALVAGNNGFADIEIIIETARQFLTDKGWVLLEHGWQQGEGVRKIFTDKG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V  F+DYGGN+RV
Sbjct: 255 YCCVETFRDYGGNERV 270


>gi|189424096|ref|YP_001951273.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter lovleyi SZ]
 gi|189420355|gb|ACD94753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter lovleyi SZ]
          Length = 286

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 131/260 (50%), Gaps = 11/260 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   LC  TGL    + ++ D  L D +     + + R  K E +  ILG ++F  
Sbjct: 29  ARREAEWLLCEATGLDRMGLYLNFDKPLQDDELAAYRSMVARRGKREPLQHILGSQEFDG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPF 121
           +   ++ D   PR +TE L++ A       + +    R +LD+GTG+G + ++L    P 
Sbjct: 89  LEFIVTRDVLIPRFDTETLLEEA-------VRQAPTARTVLDIGTGSGCIAISLFHRLPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
                VD+S  AL IA+ NA  N     F  L   +F  V E  FD+IVSNPPYI S  +
Sbjct: 142 AAITAVDLSPDALSIARRNAERNNAQIEF--LLGSFFQPVSERRFDLIVSNPPYITSADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRDF+PR++LDGG DGL  YR +A    R+L  +G   +EIG  Q  DV  +  
Sbjct: 200 ADLQPEVRDFEPRLALDGGTDGLDAYRVLAAEAPRYLEPNGWLLLEIGAGQDKDVATLLA 259

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 + +  D  G  RV+
Sbjct: 260 DAGFDAIVSVPDNAGIIRVV 279


>gi|50085502|ref|YP_047012.1| methyl transferase [Acinetobacter sp. ADP1]
 gi|49531478|emb|CAG69190.1| methyl transferase [Acinetobacter sp. ADP1]
          Length = 274

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 140/259 (54%), Gaps = 12/259 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  +  L+S ++ +    +L   Q     + ++R  K E +  I G + F+++ 
Sbjct: 19  QEAMWLLEHILELNSLELKMRQMQILTQEQEQQYLDGLMRLSKGEPLAYITGSQPFWSLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP+TE+L+++ L+  LP     +   ++DLGTGTGA+ L+L KE P++K 
Sbjct: 79  LNVTPDTLVPRPDTEILIETVLSLDLP-----EHCSMVDLGTGTGAIALSLAKERPYWKI 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
           +  DI    LE+A+SNA  + +++ +F  L S WF ++    FD+IVSNPPYI++     
Sbjct: 134 LATDIYFPTLEVAQSNAKKHALNQVKF--LCSAWFEAIPSQKFDLIVSNPPYIDANDEHM 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L L     +PR +L     GL+    I       LN  G  +VE GY+Q   V ++    
Sbjct: 192 LNLGT---EPRRALVADKHGLADLEQIIGQAVLWLNTHGWIAVEHGYDQGQAVCQLLMDH 248

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   KDYGGNDR+ L
Sbjct: 249 NFAKVQTCKDYGGNDRISL 267


>gi|153854178|ref|ZP_01995486.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814]
 gi|149753227|gb|EDM63158.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814]
          Length = 287

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 137/264 (51%), Gaps = 12/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L   TG+S    + DPD  +++ +       I    +   +  I G ++F 
Sbjct: 26  EAKLDAWYLLEYKTGISRAVFLADPDREVEEEKAESYQKDICTRARRIPLQHITGEQEFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---- 117
            +   ++ +   PR +TE+LV+ AL    P ++      ILD+ TG+G +  ++LK    
Sbjct: 86  GLNFKVNENVLVPRQDTEILVEEALKRIRPDMQ------ILDMCTGSGCILESILKFGEK 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +    KG G DIS +AL++A+ N    G   RF  ++SD F SV   +D+IVSNPPYI +
Sbjct: 140 KQMHLKGTGCDISEEALKVARENNSRLGTDARF--IKSDLFESVTEKYDMIVSNPPYIRT 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV+  DP I+LDG  DGL  YR I     R+LNK G    EIG++Q  DV  
Sbjct: 198 EEISRLDEEVKLHDPWIALDGKEDGLYFYRLIVKDSIRYLNKGGYILFEIGFDQGKDVSE 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           + ++     +   KD  G DRV++
Sbjct: 258 LLKNEGYEEIEIKKDLAGLDRVVM 281


>gi|323143930|ref|ZP_08078588.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Succinatimonas hippei YIT 12066]
 gi|322416294|gb|EFY06970.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Succinatimonas hippei YIT 12066]
          Length = 273

 Score =  137 bits (345), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 13/255 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       +I   +  L +R      + I R  + E I  ILG+++F+ +  
Sbjct: 25  DADLLLMEVLHCPRSYLITHDNEELKERAIVRFRDLISRRSRGEPIAYILGYKEFWGLPF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +   PRP+TELLV++AL F       + V  +LDLGTG+GA+ L++  E P    +
Sbjct: 85  KVNRNVLIPRPDTELLVETALKF-------KQVKSVLDLGTGSGAIILSIKYERPDINAL 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             DIS  AL++AK NA++ G+   F   +S WFS ++   FD+IVSNPPYIE    +   
Sbjct: 138 ACDISDAALQVAKENALSLGLDVTF--FKSSWFSDIKNAKFDLIVSNPPYIEE---NDEH 192

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L+   F+P  +L  G DGL   R IA       N  G   +E GYNQ  DV  I E    
Sbjct: 193 LKALSFEPVGALISGKDGLDDIRIIAKDSRHFFNPGGALLLEHGYNQGKDVRNILEECGF 252

Query: 245 FLVNAFKDYGGNDRV 259
             +   +D G N+RV
Sbjct: 253 NEIKTLRDLGSNERV 267


>gi|227510127|ref|ZP_03940176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227190332|gb|EEI70399.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 288

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 136/246 (55%), Gaps = 5/246 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S+  +++     +   Q     N + R +  E +  I+G  DFY + L + S+   PR
Sbjct: 40  GFSTTDMLIHYHDRMSSGQWLQFQNDVKRLISGEPVQYIVGQADFYGLTLNVDSNVLIPR 99

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            ETE LVD  L      +     +++LD+GTG+GA+ +AL    P ++    DIS  AL+
Sbjct: 100 VETEELVDWIL--DQTTVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISDSALK 157

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA  + V+  F  + SD F+ +   FD+IVSNPPYI +  V  +   V++ +P+I+
Sbjct: 158 VAQQNAQLHHVAINF--ILSDIFAHINEAFDLIVSNPPYISASEVGDMDSSVKNNEPKIA 215

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254
           L    DGL+ Y+++A GV  HLN  G   VEIG++Q+  V +IF E+    +V A  D  
Sbjct: 216 LFAADDGLAIYKSLAKGVDAHLNAGGQLFVEIGFHQEASVRKIFQEALPNAIVTAKHDVS 275

Query: 255 GNDRVL 260
           G+ R++
Sbjct: 276 GHQRMV 281


>gi|158321601|ref|YP_001514108.1| HemK family modification methylase [Alkaliphilus oremlandii OhILAs]
 gi|158141800|gb|ABW20112.1| modification methylase, HemK family [Alkaliphilus oremlandii
           OhILAs]
          Length = 289

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 10/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  +    + + P+  +   +       + +   H  +  I+  ++F  +  
Sbjct: 26  DAEVLLYNVLKVDRLHLHMYPEKEISKEEEALFWTYMAQRKNHMPVQYIIKKQEFMGLDF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFK 123
            +      PR +TE+LV+ A+     + E + V RI+D+GTG+GA+ ++L K  E+    
Sbjct: 86  FVEEGVLIPRGDTEILVEKAIEIYKEKFEPQKV-RIMDIGTGSGAIVVSLAKFIENSIL- 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESV 178
              +DIS KA E+AK NA  +GV  +        F ++ G      +D IVSNPPYI   
Sbjct: 144 -TAIDISPKAFEVAKKNAAHHGVDHKIAFYLGSLFEALYGKDEHKEYDFIVSNPPYIPKA 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +VD L   V+D++P ++LDGG DGL  YR I  G   +L   G    EIGY+Q   V  +
Sbjct: 203 VVDTLDAGVKDYEPHLALDGGADGLDFYREITLGAKEYLKSGGWLLFEIGYDQGESVSEL 262

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
             +  L  V   KD  G DRV+L
Sbjct: 263 LIANDLKEVQVRKDLAGLDRVVL 285


>gi|228477567|ref|ZP_04062200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus salivarius SK126]
 gi|228250711|gb|EEK09909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus salivarius SK126]
          Length = 277

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 128/230 (55%), Gaps = 14/230 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L +A  +  KH+    ILG+ DF+ +R  +      PRPETE LVD  LA + P  E  
Sbjct: 54  LLAHAFSQLKKHKPAQYILGYEDFHGLRFQVDERVLIPRPETEELVDLILAEN-PSTE-- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LD+GTG+GA+ ++L K  P ++    D+S  A+E+A+ NA  N V+  F  +QSD
Sbjct: 111 --LKVLDIGTGSGAISVSLKKSRPLWQVTASDLSVDAIELAQENAKLNQVAISF--VQSD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F ++ G FD+IVSNPPYI     + +G+ V   +P+++L    +GL+ YR I +   ++
Sbjct: 167 VFENISGSFDIIVSNPPYISENDKNEVGINVLASEPKMALFADEEGLAIYRQIIEEADKY 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           L   G    EIGY Q  D+  +    F  ++   V   KD  G DR+++ 
Sbjct: 227 LTPSGKLYFEIGYKQGQDLKGLLSLHFPDKR---VRVLKDQFGQDRMVVM 273


>gi|296533065|ref|ZP_06895709.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis
           ATCC 49957]
 gi|296266609|gb|EFH12590.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis
           ATCC 49957]
          Length = 287

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 136/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L      S   ++ +P + +  D   RF     + R L HE +  +LG + F+ +
Sbjct: 33  EARLLLAEAMATSQEALLREPRAAVAPDAASRF--AALLQRRLAHEPMAYLLGRQGFWTL 90

Query: 64  RLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            L +S DT  PR ++E +V++AL  FS P        R+LDLGTGTG + LA+L E    
Sbjct: 91  ELEVSRDTLIPRADSEAIVEAALEVFSGPG------GRVLDLGTGTGCLLLAVLAERAGA 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVGVD+S  A  +A  NA  +G++ R   L  DW +++ G FD+++SNPPYIES +V  
Sbjct: 145 FGVGVDLSPGAAALAARNAARSGLAGRAAFLAGDWDAALAGRFDLVLSNPPYIESAVVPG 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   +P  +LDGG DGL  YR I   + R L   G   +E+G  Q   V  +  + 
Sbjct: 205 LMPEVAGHEPARALDGGADGLDAYRVIVAALPRLLAPGGHAVLELGQGQAPAVSALAAAA 264

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L       D GG +R L+  
Sbjct: 265 GLASRGLRADLGGVERALVLA 285


>gi|90581728|ref|ZP_01237515.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Vibrio angustum S14]
 gi|90437082|gb|EAS62286.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Vibrio angustum S14]
          Length = 284

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   LC V       ++  P+  LDD Q       + R L  E I  I+G R+F+++ L
Sbjct: 27  DSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQLLARRLNGEPIAYIVGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+     +L +I      ++LDLGTGTGA+ LA+  E P  +  
Sbjct: 87  KVSPSTLIPRPDTERLVE----LALDKITSA-TTKVLDLGTGTGAIALAIASECPSVQVT 141

Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           G+D+  +A E+A  N+    + + RF  L   W+S ++   +F++IVSNPPYI+      
Sbjct: 142 GIDLRQEAAELAHENSQRLSILNTRF--LAGSWYSPLQNNDVFELIVSNPPYIDHADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  R I+    +HL   G   +E G+ Q + V  I E  
Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILEQL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V+  +DY G DRV + C
Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279


>gi|256845603|ref|ZP_05551061.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_36A2]
 gi|256719162|gb|EEU32717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_36A2]
          Length = 383

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 128/222 (57%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+E+A  N   N + E  + ++SD F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKI 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR ++     +L  
Sbjct: 259 DKDFKYDLIVSNPPYISKNEYETLMSEVKNYEPQNALTDLGDGLYFYREMSKLAGEYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 319 TAYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360


>gi|206891037|ref|YP_002248217.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742975|gb|ACI22032.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 279

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 15/267 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           +R++   +C V  +   Q+  +   +  + Q   + + I R LK E +  I+G   FYN+
Sbjct: 18  IREAQEIICHVLKIDKIQLYTENPEITSE-QAHTIKSLIERRLKKEPLQYIIGECYFYNI 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKE 118
           ++ +      PRPETE+LV+  L       E++ ++     RILDL TG+G + LA+ K 
Sbjct: 77  KIKVGRGVLIPRPETEILVEQVL-------ERQKLISNTGNRILDLCTGSGCIALAIGKN 129

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           +P F+  G+D S KA++ A  N   N +      L  D F+   E +F  I +NPPY+++
Sbjct: 130 APEFQIFGIDKSEKAVKYATENKALNNIKNVI-FLVGDMFNPFKEKIFACITANPPYVKT 188

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E+++++P  +L+GG DGL+ YR I +   ++L   GL  +EIG  Q   V  
Sbjct: 189 DEISKLQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQAKAVQN 248

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I       ++   KD  G DRV++  +
Sbjct: 249 IALMSGFNVIEVVKDIAGIDRVMILQK 275


>gi|330445231|ref|ZP_08308883.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489422|dbj|GAA03380.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 284

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 135/261 (51%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   LC V       ++  P+  LDD Q       + R +  E +  I+G R+F+++ L
Sbjct: 27  DSAVLLCHVLDKPRSYLLTWPEKQLDDAQYEAFQALLTRRINGEPVAYIIGEREFWSLSL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+     +L +I      ++LDLGTGTGA+ LA+  E P  +  
Sbjct: 87  KVSPSTLIPRPDTERLVE----LALEKISA-SATKVLDLGTGTGAIALAIASECPMLQVT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           G+D+  +A ++A  N+    +S  RF  L   W+S ++    FDVIVSNPPYI+      
Sbjct: 142 GIDLRQEAADLALENSQRLSISNTRF--LAGSWYSPLQQNETFDVIVSNPPYIDEADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  R I+D   +HL   G   +E G+ Q   V  I    
Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISDQGRQHLAIGGWLLMEHGFEQGSAVREILAQL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V+  +DY G DRV + C
Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279


>gi|238917366|ref|YP_002930883.1| HemK protein [Eubacterium eligens ATCC 27750]
 gi|238872726|gb|ACR72436.1| HemK protein [Eubacterium eligens ATCC 27750]
          Length = 279

 Score =  136 bits (343), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  DS   L  + G++    +++ DS+L +         I +   H  +  ILG   FY
Sbjct: 22  NAEHDSFELLSAINGMTRTFYLINGDSLLSEENFLMFEEYIEQRASHIPLQHILGKTWFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++SD   PR +TE+LV   +  +      R    ILD+ TG+G + + L K+ P 
Sbjct: 82  GYEYMVNSDVLIPRQDTEILVGEVIKVT------RSGDYILDMCTGSGCIGITLAKKFPE 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            + +GVD+S KAL +A+SN   N  +E  D ++SD F  +     F+ IVSNPPYI + +
Sbjct: 136 CRVLGVDVSEKALNVAQSNK-HNLEAENIDFMRSDLFEELNHDITFNTIVSNPPYIPTKV 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EVR  DP ++LDG  DGL  YR I       L  DG    EIG  Q  DV  I 
Sbjct: 195 IEGLQEEVRLHDPILALDGMEDGLMFYRKITAQAGDFLETDGYLCYEIGAEQAADVSDIM 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           +      +   KD  G DRV++
Sbjct: 255 KKAGFKDITVVKDLAGFDRVVM 276


>gi|323698088|ref|ZP_08110000.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. ND132]
 gi|323458020|gb|EGB13885.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio desulfuricans ND132]
          Length = 283

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 7/248 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   + +D   VL D +   +   + R    E +  ILG R+FY +   +S     PR
Sbjct: 35  GCSRPALNLDRGRVLTDEELAAVETLVARREAGEPVAYILGNREFYGLDFAVSPAVLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE +V++       R  K    R  DLGTG+G + + +    P  +GV VDIS  AL+
Sbjct: 95  PETEHIVEAVEE----RFSKDQPFRFADLGTGSGILAVTIAVLFPQARGVAVDISPDALD 150

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A++NA T+ V++R D LQ+D+ S   EG +D++VSNPPY+     +    EV  F+P  
Sbjct: 151 VARANARTHNVADRLDFLQADFTSQTPEGPYDLVVSNPPYVTEAEFEAASREVTGFEPTG 210

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF--ESRKLFLVNAFKD 252
           +L  G DGL H R +   V+  L   G   +EIG+ Q   V+ I   E      V   KD
Sbjct: 211 ALVSGPDGLDHIRAMLPRVADMLRPGGWMFMEIGWEQGCAVMNILAGEYPSFEAVGVRKD 270

Query: 253 YGGNDRVL 260
             G DRV+
Sbjct: 271 LAGLDRVV 278


>gi|89073092|ref|ZP_01159631.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium sp. SKA34]
 gi|89051045|gb|EAR56502.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium sp. SKA34]
          Length = 284

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   LC V       ++  P+  LDD Q       + R L  E I  I+G R+F+++ L
Sbjct: 27  DSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQVLARRLNGEPIAYIVGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+     +L +I      ++LDLGTGTGA+ LA+  E P  +  
Sbjct: 87  KVSPSTLIPRPDTERLVE----LALDKITSA-TSKVLDLGTGTGAIALAIASEYPSLQVT 141

Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           G+D+  +A E+A  N+    + + RF  L   W+S ++   +F++IVSNPPYI+      
Sbjct: 142 GIDLRQEAAELAHENSQRLSILNTRF--LAGSWYSPLQHNDVFELIVSNPPYIDHADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  R I+    +HL   G   +E G+ Q + V  I E  
Sbjct: 200 VQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILEQL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V+  +DY G DRV + C
Sbjct: 259 GYQQVSTSQDYAGLDRVTMGC 279


>gi|167627297|ref|YP_001677797.1| HemK family modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597298|gb|ABZ87296.1| modification methylase, HemK family [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 285

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 12/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD+     +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYLNSDKHLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ ++  ++ILDLGTG+GA+ LAL +E P  +
Sbjct: 86  LYVTKDTLIPRADTEAVV----AAVLDDIQDKNAQLKILDLGTGSGAIALALAEELPKSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
            V VD+  K L++AK NA+ N +    + +QS W+ +++   FD+IVSNPPYI+   VD 
Sbjct: 142 VVAVDLYSKTLDVAKKNALANKIV-NVEFMQSSWYENLDATKFDIIVSNPPYID---VDD 197

Query: 183 LGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             ++  VR+ +P  +L    +GL+  R I    S  L + G   +E G+ Q  D+  IF 
Sbjct: 198 ANIDDSVREHEPSKALFAADNGLADIRIIISQASGFLKQGGYLYIEHGFTQANDIANIFS 257

Query: 241 SRKLFLVNAFKDYGGNDR 258
                 +   KD    DR
Sbjct: 258 HYSFGDIQTIKDLNHKDR 275


>gi|302342175|ref|YP_003806704.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfarculus baarsii DSM 2075]
 gi|301638788|gb|ADK84110.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfarculus baarsii DSM 2075]
          Length = 291

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 128/255 (50%), Gaps = 8/255 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V GL    + +D D  L   +       ++R   HE +  I G R+F+ + L +  
Sbjct: 33  LLSQVLGLERIGLYLDFDRPLTKDELAGFKALLLRRRAHEPVAYIRGKREFFGLELAVGP 92

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETELLV+  +A     + + +  +ILDL TG GAV LAL  + P  + +  DI
Sbjct: 93  GVLIPRPETELLVERGVAL----LAQAERPKILDLCTGGGAVALALASQLPTARVLACDI 148

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186
           S +AL  A+ NA   G+ ER   LQ   +  V    G FD+I +NPPY+ S    CL  +
Sbjct: 149 SAQALAYARQNAQALGLEERVSFLQGPLWEPVAATGGFFDLITANPPYVTSGEWPCLPPD 208

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF- 245
           VRD +PR++L+ G +GL     I  G    L       VEIG  Q   V+ + ++  +F 
Sbjct: 209 VRDHEPRLALEAGPEGLDVIGPIIVGSRAFLRPLAWLLVEIGAGQGPAVMALAQAAGIFS 268

Query: 246 LVNAFKDYGGNDRVL 260
            +   +D  G DRVL
Sbjct: 269 RIELLRDLAGMDRVL 283


>gi|156973550|ref|YP_001444457.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116]
 gi|156525144|gb|ABU70230.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116]
          Length = 285

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+    + +VR +  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAQFDDLLVRRIAGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIALALASEMPKRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS-VEGL-FDVIVSNPPYIESVIVDC 182
           GVD+  +A E+A+ NA    +    FD  Q  WF   V G  F +IVSNPPYI+      
Sbjct: 144 GVDLKQEAKELAEYNASQLNIKNVTFD--QGSWFEPIVSGTKFALIVSNPPYIDEQDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I  + 
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGDAVREIMTNF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V    DYGGN+RV L C
Sbjct: 261 GYEQVVTENDYGGNERVTLGC 281


>gi|218783032|ref|YP_002434350.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764416|gb|ACL06882.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
           AK-01]
          Length = 289

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 124/230 (53%), Gaps = 16/230 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97
           + R    E +  I+G RDF+ + L ++     PRPETE LV++AL    A   P      
Sbjct: 66  VKRRAAREPVAYIVGNRDFWTLELDVNPSVLIPRPETETLVETALEVLNAAQAP------ 119

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R+LDLGTG+GA+ LAL  E P    + VD S +ALE AK+NA  + ++   D  +  W
Sbjct: 120 -MRVLDLGTGSGAIILALASEKPEHHYMAVDYSPQALETAKANAQKHNLN--VDFYKGSW 176

Query: 158 FSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F +V  L  FD++VSNPPYI S  +  L  EV  ++P  +LDGG  G+ H   I +    
Sbjct: 177 FEAVRCLDRFDLVVSNPPYIPSRDIPGLMPEVARYEPMSALDGGPQGMDHLALIIERAPE 236

Query: 216 HLNKDGLCSVEIGYNQKVDVVRI-FESRKLFLVNAFKDYGGNDRVLLFCR 264
           HL   G   +E+G++QK  V ++  E++    V   +D  G+ R  +  R
Sbjct: 237 HLKPGGWLMLEMGFDQKELVEQVALETQAYENVRFVRDLAGHFRTAVMQR 286


>gi|294785108|ref|ZP_06750396.1| methyltransferase [Fusobacterium sp. 3_1_27]
 gi|294486822|gb|EFG34184.1| methyltransferase [Fusobacterium sp. 3_1_27]
          Length = 383

 Score =  136 bits (343), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+E+A  N   N + +  + ++S+ F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELANENKTLNKI-KNINFVKSNLFEKI 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 259 DKDFKYDLIVSNPPYISKNEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDVLSVIKDYGGNDRVII 360


>gi|237740337|ref|ZP_04570818.1| methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422354|gb|EEO37401.1| methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 369

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+   + +  ILG  +FY +   +  +   PRP+TE+LV+  +   +  IE+ +   I
Sbjct: 131 MLRAKSRKPLQYILGEWEFYGLPFKVRENVLIPRPDTEILVEQCIQL-MREIEEPN---I 186

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+  A+ +A  N V N V E  + ++SD F  +
Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGLDINEDAIRLANENKVLNKV-ENVNFMKSDLFEKL 245

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++F+P+ +L    DGL  YR I+     +L  
Sbjct: 246 DEDFKYDLIVSNPPYITKEEYETLMPEVKNFEPKNALTDLGDGLHFYREISKKAESYLKD 305

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGY Q  +V +I E     +++  KDYGGNDRV+L
Sbjct: 306 TGYLAFEIGYKQAKEVSKILEDNNFAILSVVKDYGGNDRVVL 347


>gi|21672455|ref|NP_660522.1| hypothetical protein BUsg166 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25090515|sp|Q8K9W9|HEMK_BUCAP RecName: Full=Protein methyltransferase hemK homolog
 gi|21623069|gb|AAM67733.1| HemK [Buchnera aphidicola str. Sg (Schizaphis graminum)]
          Length = 275

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 135/254 (53%), Gaps = 7/254 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V   +   +I++ +  L   Q   L N I R    E I  I+G ++F+++ L
Sbjct: 23  EAEILLSHVLKCTRIAIIINQEIDLSKEQYQKLNNFIYRRSIGEPIAYIIGKKEFWSLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE+LV+  L+    ++ K +   ILDLGTG+GA+ LAL      +  +
Sbjct: 83  CVSYKTLIPRPDTEILVEKILS----KVNK-NFRSILDLGTGSGAIALALASVCSHWNII 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD S  AL+IAK N +   + +  +   S+WFS +   F +IVSNPPYI    +  L  
Sbjct: 138 GVDNSYSALKIAKINGLKLNL-KNVEFFYSNWFSHINEKFHIIVSNPPYIGIKEIQSLKK 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++  ++P  +L    DGL     I    S++L   G   +E G+ QK+ V   F+    F
Sbjct: 197 DIF-YEPFNALISKKDGLLDIELIIQKASQYLFDKGWLFIEHGWKQKLKVQYFFKKYNFF 255

Query: 246 LVNAFKDYGGNDRV 259
            + +FKDYGGNDR+
Sbjct: 256 CIQSFKDYGGNDRI 269


>gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145]
 gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145]
          Length = 282

 Score =  136 bits (342), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 128/236 (54%), Gaps = 10/236 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L D Q   L N + R  + E +  I+G R+F+++ L +   T  PRP+TE LV++A
Sbjct: 48  PERRLTDAQFQQLQNWVARRCRGEPVAYIVGEREFWSLSLAVDKSTLIPRPDTECLVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+ SLP        R+LDLGTGTGA+ LAL  E P ++   VD S  A+ +A+ NA   G
Sbjct: 108 LSLSLPAD-----ARVLDLGTGTGAIALALKSERPDWQVTAVDWSASAVSLAQRNARRLG 162

Query: 146 VSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           ++   + L S WF S+    ++D+IVSNPPYI          +VR F+PR +L     G+
Sbjct: 163 LA--VEVLHSHWFDSLADRSVYDLIVSNPPYIAEDDAHLAQGDVR-FEPRSALVAERAGI 219

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           +    IA+    +L  +G   +E G+ Q   V+ +        VN ++DYG  +R+
Sbjct: 220 ADLHHIAEQGHAYLKPNGWLLMEHGWQQAQAVITLLREFGYKNVNIWRDYGNVERI 275


>gi|78484733|ref|YP_390658.1| HemK family modification methylase [Thiomicrospira crunogena XCL-2]
 gi|78363019|gb|ABB40984.1| modification methylase, HemK family [Thiomicrospira crunogena
           XCL-2]
          Length = 279

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 124/240 (51%), Gaps = 9/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P S  +  Q F LT+   R ++   I  ++G R+F+ +   ++ DT  PRP+TE+LV++A
Sbjct: 48  PLSEAEHTQYFDLTS---RRVEGHPIAHLIGHREFWGMDFQVTPDTLIPRPDTEILVETA 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +         LDLGTG+GA+  A+    P  +   VD    AL +A+ NA  + 
Sbjct: 105 LEIMASK--NNQAWSFLDLGTGSGAIACAIKASHPACEATAVDFQASALAVAQQNANQHH 162

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++  F   Q  WF  V+G  FD+IVSNPPYIE         +VR F+P  +L  G DGL 
Sbjct: 163 LTIHFK--QGSWFDPVKGQTFDLIVSNPPYIEEHDPHLKEGDVR-FEPLTALTSGEDGLD 219

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I +    +L   G   +E GYNQ   V R+F+++    V +  DYG N RV L  R
Sbjct: 220 DIRFIIEHAPTYLKPKGWLLIEHGYNQHEAVQRLFKAQGFTAVESRLDYGQNPRVTLGQR 279


>gi|227513056|ref|ZP_03943105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus buchneri ATCC 11577]
 gi|227524271|ref|ZP_03954320.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
 gi|227083631|gb|EEI18943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus buchneri ATCC 11577]
 gi|227088502|gb|EEI23814.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
          Length = 288

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 136/246 (55%), Gaps = 5/246 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S+  +++     +   Q     N + R +  E +  I+G  +FY + L + S+   PR
Sbjct: 40  GFSTTDMLIHYHDKMLSGQWLQFQNDVKRLISGEPVQYIVGQANFYGLTLNVDSNVLIPR 99

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            ETE LVD  L      +     +++LD+GTG+GA+ +AL    P ++    DIS  AL+
Sbjct: 100 VETEELVDWIL--DQTTVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVNASDISESALK 157

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA  + V+  F  + SD F+ +   FD+IVSNPPYI +  V  +   V++ +PRI+
Sbjct: 158 VAQQNAQLHHVAINF--ILSDMFAHINEAFDLIVSNPPYISASEVGDMDSSVKNNEPRIA 215

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254
           L    DGL+ Y+++A GV  HLN  G   VEIG++Q+  V +IF E+    +V A  D  
Sbjct: 216 LFAADDGLAIYKSLAKGVDAHLNVGGQLFVEIGFHQETSVRKIFQEALPNAIVTAKHDVS 275

Query: 255 GNDRVL 260
           G+ R++
Sbjct: 276 GHQRMV 281


>gi|146283508|ref|YP_001173661.1| methyl transferase [Pseudomonas stutzeri A1501]
 gi|145571713|gb|ABP80819.1| methyl transferase [Pseudomonas stutzeri A1501]
          Length = 275

 Score =  135 bits (341), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 126/221 (57%), Gaps = 8/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  ILG + F+++ L +++DT  PRP+TELLV++AL     ++      R+
Sbjct: 58  LARRRQGEPVAYILGRQGFWSLELEVAADTLIPRPDTELLVETAL-----QLLSAAPARV 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTGA+ LAL  E P ++  GVD    A+ +A+ N +  G+     TL SDWF+ +
Sbjct: 113 LDLGTGTGAIALALATERPAWQVCGVDRVEAAVRLAERNRLRLGLHNAAFTL-SDWFAGL 171

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  F +IVSNPPYI +     L  +VR F+P+ +L  G DGL   RTI    + HL   
Sbjct: 172 NGERFQMIVSNPPYIPASDPHLLQGDVR-FEPQSALIAGADGLDDIRTIIAQAAAHLQSG 230

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E GY+Q   V  +  SR    V +  D GG++R+ L
Sbjct: 231 GWLLLEHGYDQAEAVRMLLLSRGFEDVQSRLDLGGHERISL 271


>gi|83644570|ref|YP_433005.1| methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
 gi|83632613|gb|ABC28580.1| Methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
          Length = 276

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 140/262 (53%), Gaps = 18/262 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR-----QRFFLTNAIVRSLKHESIHRILGWRDF 60
           D+   L  V G     +I   DSVLD+      QR        R + H     ++G R+F
Sbjct: 22  DAEVLLAHVLGKGRTYLISHNDSVLDEPALQAYQRLIAERETGRPVAH-----LIGKREF 76

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++   +S  T  PRPETELLV+  L  + P   K     +LDLGTGTGA+  AL  E P
Sbjct: 77  WSLEFQVSPATLIPRPETELLVELVLEEAAPAGAK-----VLDLGTGTGAIACALAHERP 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
            ++   VD+S +A+E+A +N ++ G++     L+S+W+ +V +  F VIVSNPPYI+++ 
Sbjct: 132 DWRFTAVDVSQEAVELATTNVLSLGLTN-VRCLRSNWYDAVGDEQFHVIVSNPPYIDALD 190

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +     +VR F+P  +L     GL+  R IA G  RHL   GL +VE GY+Q      IF
Sbjct: 191 IHLTQGDVR-FEPASALVAADHGLADIRMIAAGAGRHLLAGGLLAVEHGYDQGAAAREIF 249

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            +     V   +D  G+DR+ L
Sbjct: 250 STAGYVDVRTHQDLAGHDRITL 271


>gi|284007354|emb|CBA72731.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Arsenophonus nasoniae]
          Length = 256

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 7/247 (2%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG +   +I   ++ L  +Q+  L + +VR  + E I  ++  ++F+++ + +SS T  
Sbjct: 4   ITGKTRTFLIAFGETELSVKQQQQLEHLLVRRARGEPIAYLVEEKEFWSLPIKVSSVTLI 63

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE LV+ AL      +  +  V+ILDLGTGTGAV LAL  E P  + VGVDIS  A
Sbjct: 64  PRPDTECLVERALQL----LSDKRAVKILDLGTGTGAVALALASECPQAQIVGVDISDAA 119

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           + +A+ NA  N +       +S+WF+S+    FD+IVSNPPYI+         +VR F+P
Sbjct: 120 ITLAQLNA-DNLLINNVKFCKSNWFTSLPIQQFDMIVSNPPYIDECDPHLQQGDVR-FEP 177

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           + +L     GL+  + I +  + +L  +G   +E G+ Q   V ++F       V  F+D
Sbjct: 178 KTALISANHGLADIQLIIEQSANYLANNGWLLLEHGWLQGRQVRQLFSCHHYQQVVTFQD 237

Query: 253 YGGNDRV 259
           YGGNDR+
Sbjct: 238 YGGNDRI 244


>gi|289765719|ref|ZP_06525097.1| methyltransferase [Fusobacterium sp. D11]
 gi|289717274|gb|EFD81286.1| methyltransferase [Fusobacterium sp. D11]
          Length = 370

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 130/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   ++     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+++A  N + N + E  + ++S+ F  +
Sbjct: 187 LDIGSGSGAISIAIANELKSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKL 245

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 246 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 347


>gi|290475216|ref|YP_003468102.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289174535|emb|CBJ81329.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  135 bits (341), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 12/262 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   ++++   +   L + + R ++ E +  I+G R+F+++ 
Sbjct: 22  RDAEILLGYVTGRSRTYLIAFDETLISSEELHQLDSLLGRRIQGEPVAYIIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S  T  PRP+TE LV+ AL   LP        RILDLGTGTGA+ LAL  E      
Sbjct: 82  FAVSPATLIPRPDTECLVEKALEL-LP----DSPARILDLGTGTGAIALALASERNDCYV 136

Query: 125 VGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            GVDI+  A+ +A+ NA  N         + LQS+WF++V    FD+IVSNPPYI+    
Sbjct: 137 TGVDINSDAVMLAQYNAEKNAGKLAIHNVNFLQSEWFAAVGNQQFDMIVSNPPYIDECDP 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKVDVVRIF 239
                ++R F+P  +L    +G++  + I  G +RH L+ +G   +E G+ Q + V  +F
Sbjct: 197 HLQEGDIR-FEPATALIAAQNGMADLQAIV-GQARHFLSPNGWLLLEHGWKQGIVVRNLF 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
             +    +  F+DYGGN+R+ +
Sbjct: 255 LEKGYQQIATFQDYGGNERITI 276


>gi|332184656|gb|AEE26910.1| modification methylase, HemK family [Francisella cf. novicida 3523]
          Length = 284

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 138/256 (53%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V  +    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLDVDKTYLCINSDRRLDKNTLKEIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PR +TE+LV + L      ++K   ++ILDLGTGTGA+ LAL  E    + 
Sbjct: 86  LYVTKDTLIPRADTEVLVSTVLD---DIVDKNAKLKILDLGTGTGAIGLALAAELVNSQI 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
           V VD+  ++L++AK+NA  N ++  +F  +QS W++S++ G FD+IVSNPPYI+    + 
Sbjct: 143 VAVDLYQQSLDVAKNNAQANNITNVKF--IQSSWYTSLDTGKFDIIVSNPPYIDLADTN- 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V++++P  +L    +GL+  + I       LN  GL  +E G+ Q   V  +F   
Sbjct: 200 IEQSVKEYEPARALFAADNGLADIKEIISQAKNFLNPGGLVYIEHGFTQADAVTALFSQY 259

Query: 243 KLFLVNAFKDYGGNDR 258
               +   KD   NDR
Sbjct: 260 NFTDIKTVKDLNNNDR 275


>gi|256027763|ref|ZP_05441597.1| methyltransferase [Fusobacterium sp. D11]
          Length = 383

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 130/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   ++     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+++A  N + N + E  + ++S+ F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKL 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360


>gi|168203425|gb|ACA21560.1| HemK [Candidatus Pelagibacter ubique]
          Length = 280

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 146/262 (55%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   L  V   +   +I++ +  ++    +     + +  K + +  ++G +DF+N
Sbjct: 22  AQLDSEILLAEVINKNREYIILNQNHTVNKESYYQFKTLVEQRSKGKPVAYLVGKKDFWN 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++     PRP+TE++V+  L  +    + +  + ILD+G G+G + L++LKE    
Sbjct: 82  YQFQINEHVLIPRPDTEIIVEQVLKIT----KFKSNLMILDIGVGSGCILLSVLKEKKNS 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G+D+S K++EI+K NA+  G+  R    ++D  +   G +D+I+SNPPYI  + +  
Sbjct: 138 RGIGIDLSKKSVEISKLNALNLGLLNRLKIFKTDVDNFNFGKYDLIISNPPYINKLDLKY 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V +F+P I+LDGG++G+S    + +  S  + K G   +EI +NQ+  V ++  ++
Sbjct: 198 LDKDVINFEPNIALDGGLEGISVISKVINKSSELIKKKGKLILEISFNQREKVKKLLINK 257

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
             ++    KDY  NDR ++  +
Sbjct: 258 GFYINKILKDYAKNDRCIISTK 279


>gi|188534014|ref|YP_001907811.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99]
 gi|188029056|emb|CAO96924.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99]
          Length = 281

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 138/256 (53%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   D  LD      L   +VR    E I  + G R+F+++ 
Sbjct: 22  RDAEILLGLVTGKSRAWLIGFDDHELDAATLKRLDALLVRRAAGEPIAYLTGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP++E+LV+ ALA  LP         +LDLGTG+GA+ LAL  E    + 
Sbjct: 82  LCVTPDTLIPRPDSEVLVEQALAH-LP----GGPCSVLDLGTGSGAIALALASERADCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +GVD    A+ +A+ NA   G++     +Q DWFS++ +  F +IVSNPPYI++      
Sbjct: 137 LGVDRIPAAVALAQHNAARLGLAN-ATFMQGDWFSALNQQRFAMIVSNPPYIDAADEHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+  + IA    R+L   G   +E G+ Q  D+ +I   + 
Sbjct: 196 QGDVR-FEPASALVAGDSGLADIKIIAAQAGRYLVNQGWLLLEHGWQQGEDIRQILADKG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              ++  +DYGGNDRV
Sbjct: 255 FCQISTRQDYGGNDRV 270


>gi|291520819|emb|CBK79112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coprococcus catus GD/7]
          Length = 289

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 138/258 (53%), Gaps = 10/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIV---DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L  + G+S    ++   DP      +Q       I R  +   +  ++G  +F  
Sbjct: 28  DAWYLLEHIYGISRVDFLIRRNDPFDEAQMKQSADYQALIRRRSEGYPVQYLMGSTEFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PR +TE+LV++ALA   P        R+LD+ TG+G + L+L K     
Sbjct: 88  LPFFVNESVLIPRQDTEVLVETALAMMKPE------CRLLDMCTGSGCILLSLAKLGTVA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GVGVDIS  AL++A+ N    G+S+    + SD F SVEG+FD+IVSNPPYI +  ++ 
Sbjct: 142 EGVGVDISEGALKVAERNRENLGLSQ-VKLVHSDLFGSVEGVFDMIVSNPPYIPTNDIED 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV+D +P ++LDG  DGL  YR +A+   R+L   G    EIGY+Q   V ++ +  
Sbjct: 201 LMREVKDHEPHLALDGSRDGLLFYRKLAEESGRYLVPGGSLLFEIGYDQGKAVSQLLDQA 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               ++  KD  G DRV+
Sbjct: 261 GFKDIHVKKDLAGLDRVV 278


>gi|157826556|ref|YP_001495620.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii OSU 85-389]
 gi|157801860|gb|ABV78583.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii OSU 85-389]
          Length = 563

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 139/269 (51%), Gaps = 30/269 (11%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ +P+  L+  +   +   + R LKH+ I  ILG ++FY+    ++     PR +TE+L
Sbjct: 43  LLANPEKQLNQLEIEAVEKVLERRLKHKPIAYILGTKEFYSREFIVNKHVLIPRNDTEIL 102

Query: 82  VDSALAFSLPR--------------------------IEKRDVVR---ILDLGTGTGAVC 112
           +D  L +                              ++ R+ ++   IL+LGTG+G + 
Sbjct: 103 IDVVLQYHSQHFQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSSNILELGTGSGCIS 162

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171
           ++LL E P  +    DIS  A+E+AKSNA+ + V++R   + S+WF ++ +  FD+IVSN
Sbjct: 163 ISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFENIGKQKFDLIVSN 222

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI       + +E  +++P I+L    DGL  Y+ IA+   + L ++G   +EIGY Q
Sbjct: 223 PPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLKQNGKIILEIGYKQ 282

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              V +IF      + N  +D   ++RV+
Sbjct: 283 ADQVSQIFLDHGYVIDNIHQDLQSHNRVI 311


>gi|260598214|ref|YP_003210785.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter turicensis z3032]
 gi|260217391|emb|CBA31447.1| Protein methyltransferase hemK [Cronobacter turicensis z3032]
          Length = 280

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 139/258 (53%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L D +   L   + R    E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGRTRTFILAFGETALTDDELARLETLLARRAAGEPVAYLIGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S+ T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LA+  E P    
Sbjct: 82  LEVSTATLIPRPDTECLVEQALA-RLPAT----ACRILDLGTGTGAIALAIASERPDCHV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             +D+  +A+E+AK NA   G+ +    LQS WFS++  + F +IVSNPPYI+       
Sbjct: 137 TALDVIPEAVELAKRNAQRLGI-DNVTVLQSHWFSALTDVRFSLIVSNPPYIDGDDPHLT 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L     GL+  +T+  G    L  +G   +E G+ Q   V  +FE   
Sbjct: 196 QGDVR-FEPKSALVAENAGLADLKTLIVGARHFLEDNGGLLLEHGWQQGGAVRELFERAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YQGVETCRDYGGNERLTL 272


>gi|262369774|ref|ZP_06063102.1| methyl transferase [Acinetobacter johnsonii SH046]
 gi|262315842|gb|EEY96881.1| methyl transferase [Acinetobacter johnsonii SH046]
          Length = 272

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 10/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  +T + S  +++  D VL D Q      A+ R    E +  + G + F+ + 
Sbjct: 19  QENAWLLEHITKIDSFDLVMKKDQVLTDEQEQAYVAALARIEAGEPLAYVTGSQPFWTLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP+TE+LV++ L   LP     +  RI+DLGTGTGAV L+L  E   +  
Sbjct: 79  LIVTPDTLVPRPDTEVLVETVLRLDLP-----EDARIVDLGTGTGAVALSLACERDTWDI 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
              DI    L +A+ NA  + +++      S WF+ +    FDVIVSNPPYI++   D  
Sbjct: 134 TATDIYEPTLAVAQQNAEKHDLNDVTFVCGS-WFAPLNRKFFDVIVSNPPYIDA---DDA 189

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            ++    +P  +L     GL+  R I     +HL  DG   +E GY+Q   V +IF+   
Sbjct: 190 HMQDLATEPERALVAADHGLADLRVIIQQGKKHLTLDGWVVLEHGYDQADAVQKIFKEAG 249

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KDYGGNDRV L
Sbjct: 250 YKQVRTVKDYGGNDRVTL 267


>gi|260494287|ref|ZP_05814418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_33]
 gi|260198433|gb|EEW95949.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_33]
          Length = 383

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   ++     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+E+A  N   N + E  + ++S+ F  +
Sbjct: 200 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKL 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGNDRV++
Sbjct: 319 TGYLAYEIGYNQAKDVTKILQNNNFDILSVIKDYGGNDRVVI 360


>gi|283832856|ref|ZP_06352597.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC
           29220]
 gi|291071456|gb|EFE09565.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC
           29220]
          Length = 277

 Score =  135 bits (339), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++VL + QR  L   + R  + E +  + G R+F+++ 
Sbjct: 22  RDAEILLEFVTGKGRTFILAFGETVLTEAQREQLATLVARRQRGEPVAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----ASACRILDLGTGTGAIALALASERPDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  N     + +    LQSDWFS++ G  FD+IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAMRNTRHLAI-DNVQVLQSDWFSALSGQQFDMIVSNPPYIDEQDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G +GL+    I D     L   G   +E G+ Q   V   F    
Sbjct: 196 QGDVR-FEPLSALVAGENGLADIVHIIDSSRSVLTPGGYLLLEHGWQQGAAVREAFIRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YLAVETCRDYGGNERITL 272


>gi|311693604|gb|ADP96477.1| modification methylase, HemK family [marine bacterium HP15]
          Length = 283

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 131/257 (50%), Gaps = 9/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +TGLS       P+  + D         +   +    +  +LG ++F+++ L
Sbjct: 28  DAELLLSHITGLSRTSFRAWPEREVTDTHAEAFERLVQDRVAGRPVAHLLGHQEFWSLPL 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S+ T  PRP+TE LV+ ALA  LPR        +LDLGTGTGA+ LAL  E   ++  
Sbjct: 88  KVSASTLIPRPDTECLVEVALALPLPR-----QASVLDLGTGTGAIALALASEHGGWRIS 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D   +A+ +A+ NAV  G++     +QS WFS +E   FD+IVSNPPYI         
Sbjct: 143 ACDAVPEAVALARENAVALGLN--LSVVQSSWFSGLEPERFDLIVSNPPYIPDSDRHLEE 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R I       L + G   VE G++Q   V ++F +R  
Sbjct: 201 GDVR-FEPASALVSGSDGLDDLRLIISQAPDWLFEGGWLLVEHGFDQAEAVAQLFHARGF 259

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +DYG  DR+ L
Sbjct: 260 KAVETRQDYGNRDRMTL 276


>gi|153814376|ref|ZP_01967044.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756]
 gi|317500090|ref|ZP_07958325.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087686|ref|ZP_08336612.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848772|gb|EDK25690.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756]
 gi|316898575|gb|EFV20611.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409667|gb|EGG89103.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 287

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT +S       P+  L + ++      I R  +   +  I G ++F  +  
Sbjct: 25  DAWYLLEYVTKISRAVFYAYPEKELTEEEKIQYEECIKRRAERIPLQHITGVQEFMGLPF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESP 120
            ++     PR +TE+LV+ AL       + +++VRILDL TG+G + L++L     K   
Sbjct: 85  LVNEHVLIPRQDTEVLVEQALCLLEKEKKHKEIVRILDLCTGSGCILLSMLHYVRRKRKI 144

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              GVG DIS +AL +A  NA   G+  +F  +Q D F +VEG FD+I+SNPPYI +  +
Sbjct: 145 DIYGVGSDISKEALAVAVENAKKLGIEAKF--VQGDLFENVEGSFDMILSNPPYIRTSEI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR  DP  +LDG  DGL  YR I     ++L + G    EIG +Q   V  + +
Sbjct: 203 ERLQEEVRFHDPIKALDGKEDGLYFYRIIVKESRQYLKRGGWLIFEIGSDQAEAVKTLLQ 262

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   KD  G DRV+
Sbjct: 263 EAGYENIEVKKDLAGLDRVV 282


>gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR]
 gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR]
          Length = 281

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 10/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D  + LC V       ++  P+  L   Q+      I+   K + +  I G R+F++
Sbjct: 20  AAADVSALLCFVLDKEKTYLMTWPEKPLTQEQQRHYEECILARQKGKPVAHITGRREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE LV++AL+  LP     +  R+LDLGTGTGAV LAL  E P +
Sbjct: 80  LMLEVNASTLIPRPDTETLVEAALSLELP-----ENARVLDLGTGTGAVALALKSERPGW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +    D S  A+E+A+ N+   G++   + L S+WF SV     FD+I+SNPPYI++   
Sbjct: 135 QVWACDKSGDAVELARRNSQALGLN--VEILCSNWFQSVPKSLKFDLILSNPPYIDAGDP 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+   TI    + HL   G   +E G+ Q   V  +  
Sbjct: 193 HLSMGDVR-FEPQTALIAENNGLADIETIIKEANNHLADQGWLLLEQGWQQADSVAELLF 251

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                 VN ++DY   DRV
Sbjct: 252 KSGYKKVNRWQDYARVDRV 270


>gi|226952753|ref|ZP_03823217.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|226836502|gb|EEH68885.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
          Length = 270

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 14/263 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  + G++S ++ +  +  L + Q     + + R  + E +  + G + F+ + 
Sbjct: 19  QEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PRP+TE+LV++ L  SL P+        I+DLGTGTGA+ LAL  E P + 
Sbjct: 79  LKVTHDTLVPRPDTEILVETVLKLSLDPQ------ANIVDLGTGTGAIALALASERPQWS 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
               DI    LE+A+ NA+ +G+S+ +F      WF ++E   FD+IVSNPPYI+    D
Sbjct: 133 VTATDIYQPTLEVAQENALKHGLSQVKFAC--GAWFEALEQQQFDLIVSNPPYIDP---D 187

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            + ++    +P  +L     GL+   TI       L  +G  ++E GY+Q   V  IFE 
Sbjct: 188 DVHMQKLKSEPERALIAANHGLADIETIIAQGKDWLKAEGWIALEHGYDQGQVVREIFEQ 247

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KDYGGNDRV L  +
Sbjct: 248 HGFNQIQTIKDYGGNDRVSLAQK 270


>gi|59711376|ref|YP_204152.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Vibrio fischeri ES114]
 gi|59479477|gb|AAW85264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Vibrio fischeri ES114]
          Length = 284

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ D +       + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  +      ILDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+E+AK NA  N ++   +  Q  WF   S+   FD+IVSNPPYI+       
Sbjct: 142 GVDYQDDAVELAKGNAKINHIN-NVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G S    I      +L   G   +E G+ Q   +   FE   
Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DY GNDRV L
Sbjct: 260 YINVKTEQDYAGNDRVTL 277


>gi|168704925|ref|ZP_02737202.1| modification methylase, HemK family protein [Gemmata obscuriglobus
           UQM 2246]
          Length = 291

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 118/232 (50%), Gaps = 7/232 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D +R      I R L    +  ++G R FY +   +      PR +TE LV  AL     
Sbjct: 59  DAERAKYKELITRRLAGWPVAYLVGSRGFYLLNFDVDPAVLIPRSDTETLVGEALK---- 114

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R++      +LD+GTG+G + ++L  +         D+S  AL +AK NA+ N V++R  
Sbjct: 115 RLKPLTAPAVLDIGTGSGCIAVSLAHQKKDSHVTATDVSPDALAVAKRNAIKNNVADRMT 174

Query: 152 TLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            LQ D F+ +     FD++VSNPPYI       L  +VRD +PR++LDGG DGL+ YR I
Sbjct: 175 FLQGDLFAPLPAGVTFDLVVSNPPYIAQSEFAELAPDVRDHEPRVALDGGPDGLAFYRRI 234

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFKDYGGNDRVL 260
           A  V   L   G   +EIG+ Q   V   I E  +L L    KD G N RV+
Sbjct: 235 AAAVGPFLKPGGSLLLEIGWKQDAAVRALIAEQPELELGPTIKDMGKNPRVV 286


>gi|296775700|gb|ADH42976.1| polypeptide chain release factor methylase [uncultured SAR11
           cluster alpha proteobacterium H17925_38M03]
          Length = 279

 Score =  134 bits (338), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 132/256 (51%), Gaps = 5/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L +    S  +++V+ +  + D++       + R  ++E I  I+  ++F+  + 
Sbjct: 25  DSEILLSKTLNKSREEILVNLNFEIKDKEILVFNEYLNRRSQNEPIAYIVEEKEFWGEKF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ DT  PRPETELLVD  L     +I     V ILD+GTG+G + L+LL       G+
Sbjct: 85  YVNKDTLIPRPETELLVDKIL-----KIYNGKKVTILDMGTGSGCIILSLLNNLNKSYGI 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS +A+ IAK NA    +  +       + +     FD+IVSNPPY+    +  L  
Sbjct: 140 GVDISKRAILIAKKNASRLKILNKVKFFNRPFENIFYKKFDLIVSNPPYVIRKDIKNLSP 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V+ F+P+I++DGG DGL   + +       L   G+ ++EIG  Q   V +I  +    
Sbjct: 200 DVKKFEPKIAIDGGNDGLDLIKKVIYKSKNILKIKGVLALEIGNEQYKKVSKILVNNSFK 259

Query: 246 LVNAFKDYGGNDRVLL 261
           + N  KDY  N R ++
Sbjct: 260 IKNTIKDYKNNVRCII 275


>gi|332971800|gb|EGK10748.1| protein-(glutamine-N5) methyltransferase [Desmospora sp. 8437]
          Length = 314

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 117/218 (53%), Gaps = 11/218 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G ++FY     +      PRPETE+LV++ L      I K   V  +D+GTG+G
Sbjct: 94  PVQYLIGEQEFYGRSFRVEPSVLIPRPETEILVETVLR-EADGIWKGKAVTAVDMGTGSG 152

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166
           A+ + L  E P ++ V VD S  AL++A+ N   NG  +R   +Q DW   +   +   D
Sbjct: 153 AIAVTLAAERPAWEVVAVDRSPAALKVARQNGAKNGSGDRIRWMQGDWLEPLLKRDLRVD 212

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           V+VSNPPYI +  +  L +EVRD +PR++LDGG DGL  YR +  G+   L   GL   E
Sbjct: 213 VVVSNPPYIPAGEIPRLDVEVRDHEPRMALDGGPDGLDPYRILVRGIPAVLKNPGLVVFE 272

Query: 227 IGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
           +G +Q   V  + E      ++F V+   D  G  RV+
Sbjct: 273 VGEDQSETVGEMLEESLAGAQVFFVS---DLAGRPRVV 307


>gi|146318503|ref|YP_001198215.1| methylase of polypeptide chain release factors [Streptococcus suis
           05ZYH33]
 gi|146320694|ref|YP_001200405.1| methylase of polypeptide chain release factors [Streptococcus suis
           98HAH33]
 gi|253751629|ref|YP_003024770.1| methyltransferase [Streptococcus suis SC84]
 gi|253753531|ref|YP_003026672.1| methyltransferase [Streptococcus suis P1/7]
 gi|253755644|ref|YP_003028784.1| methyltransferase [Streptococcus suis BM407]
 gi|145689309|gb|ABP89815.1| Methylase of polypeptide chain release factors [Streptococcus suis
           05ZYH33]
 gi|145691500|gb|ABP92005.1| Methylase of polypeptide chain release factors [Streptococcus suis
           98HAH33]
 gi|251815918|emb|CAZ51532.1| putative methyltransferase [Streptococcus suis SC84]
 gi|251818108|emb|CAZ55902.1| putative methyltransferase [Streptococcus suis BM407]
 gi|251819777|emb|CAR45684.1| putative methyltransferase [Streptococcus suis P1/7]
 gi|292558284|gb|ADE31285.1| Modification methylase HemK [Streptococcus suis GZ1]
 gi|319758067|gb|ADV70009.1| methylase of polypeptide chain release factors [Streptococcus suis
           JS14]
          Length = 277

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 15/224 (6%)

Query: 40  NAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           +AI + L +H     I+G  DF+ +   +      PRPETE LVD  L     +      
Sbjct: 56  DAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVDLIL-----QENSGAS 110

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+GTG+GA+ ++L K  P ++ V VDIS  AL +A+ NA TN VS  F  L+SD  
Sbjct: 111 LRILDIGTGSGAIAISLAKARPDWEVVAVDISNDALAVAQENARTNQVSVHF--LESDVL 168

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +V G FD+IVSNPPYI     D +GL V   +P ++L    DG++ YR IA+     L 
Sbjct: 169 QAVTGKFDIIVSNPPYISPDDTDEVGLNVLTSEPHLALFAEEDGMAIYRQIAEQAGAFLK 228

Query: 219 KDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDR 258
           ++G    EIGY Q  D+  +    F  ++   +   KD  G DR
Sbjct: 229 ENGKLYFEIGYKQGQDLTDLLALHFPQKQ---IRVLKDQFGQDR 269


>gi|238919471|ref|YP_002932986.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Edwardsiella ictaluri 93-146]
 gi|238869040|gb|ACR68751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Edwardsiella ictaluri 93-146]
          Length = 279

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 139/262 (53%), Gaps = 10/262 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   +++L   Q   LT+ + R ++ E +  ++G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRSFLLAFGETLLTAAQLAQLTSLLARRVQGEPVAYLIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP       V+I+DLGTGTGA+ LAL  E P  + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQAL-LRLPATP----VQIVDLGTGTGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             V+ +  A+ +A+ NA   G+S R + LQ  WF+ + G  F +IVSNPPYI++      
Sbjct: 137 SAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+  R IA     +L   G   +E G+ Q   V  +     
Sbjct: 196 QGDVR-FEPASALVAAEQGLADLRAIARQAPDYLALGGWLLLEHGWQQGAAVRALLTEYG 254

Query: 244 LFLVNAFKDYGGNDRVLL--FC 263
              V + +DYG N+RV L  +C
Sbjct: 255 FCRVESVRDYGNNERVTLGQYC 276


>gi|34581095|ref|ZP_00142575.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246]
 gi|28262480|gb|EAA25984.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246]
          Length = 524

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 21/262 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSAL---AFSLPRIEKRD-----------------VVRILDLGTGTGAVCLALLKESPF 121
           VD      +      EK+                   + IL+LGTG+G + ++LL E P 
Sbjct: 103 VDVVFQCHSHESGNPEKKQPNPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELPH 162

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              +  DIS  A++I KSNA    V++R   + S+WF ++E   FD IVSNPPYI     
Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             + +E  +++P I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+  V +IF 
Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                + + +KD  G+ RV+LF
Sbjct: 283 DHGYNIESVYKDLQGHSRVILF 304


>gi|50121118|ref|YP_050285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49611644|emb|CAG75093.1| protein methyltransferase [Pectobacterium atrosepticum SCRI1043]
          Length = 281

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 140/259 (54%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   ++ L   ++  LT  + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRTFLLAFGETELSAAEQQPLTELLARREQGEPIAYLIGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP+        +LDLGTGTGA+ LAL  E    + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CSVLDLGTGTGAIALALASERRDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
           +GVD+   A+ +A  NA    + + RF  L   W+S +E + F +IVSNPPYI+   V  
Sbjct: 137 IGVDLQPDAVALATKNAQQLKLDNARF--LPGSWYSPLEHMRFALIVSNPPYIDVDDVHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  R I +    +L+  G   +E G+ Q   V R+ + R
Sbjct: 195 AQGDVR-FEPASALIAADNGLADLRAIIESAPHYLDAGGWLLLEHGWQQGDAVRRLLQVR 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +  ++DYGGNDRV L
Sbjct: 254 GFTQIETYQDYGGNDRVSL 272


>gi|225575053|ref|ZP_03783663.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037723|gb|EEG47969.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM
           10507]
          Length = 283

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 21/243 (8%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWR-------------DFYNVRLTLSSDTFEPRPET 78
           DR  +FL  +     + E   R++  R              F  +   +      PR +T
Sbjct: 38  DRAHYFLRESEEAGSQEEEYRRLISLRCGRIPLQHLTHQAWFMGLEFYVDGRVLVPRQDT 97

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           E+LV+ A+     R+E  D  R+LD+ TG+G + L++L + P  KG GVD+S  ALE+A+
Sbjct: 98  EILVEEAVR----RLE--DGQRLLDMCTGSGCILLSILSQKPCCKGTGVDLSADALEVAR 151

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N     ++  F   QSD F+ + G +++IVSNPPYI + ++  L  EVR +DP ++LDG
Sbjct: 152 LNGRRLNITADFR--QSDLFTDIGGRYEMIVSNPPYIPTGVIPTLEEEVRSYDPNLALDG 209

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DGLS YR I +  S  L   G    EIG++Q   V  + E+     +   KD  G DR
Sbjct: 210 GEDGLSFYRRIVEQASTRLEDGGWLLFEIGHDQGRCVRDMMENAGYGELQVVKDLAGRDR 269

Query: 259 VLL 261
           V+L
Sbjct: 270 VVL 272


>gi|310767483|gb|ADP12433.1| Protein methyltransferase [Erwinia sp. Ejp617]
          Length = 281

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DS LD      L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRAWLIGFDDSELDAVALAQLDALLKRRTAGEPIAYLTGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L+++ DT  PRP++E+LV+ ALA  LP         ILDLGTG+GA+ LAL  E P  + 
Sbjct: 82  LSVTPDTLIPRPDSEVLVEQALAH-LPVAAG----SILDLGTGSGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +G+D    A+ +A+ NA   G++     +  DWFS++ +  F VIVSNPPYI++      
Sbjct: 137 IGIDRIPAAVALAQHNAARLGLTNA-TFMPGDWFSALKQQQFAVIVSNPPYIDATDKHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I     
Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDHH 254

Query: 244 LFLVNAFKDYGGNDRV 259
              +   +DYGGNDRV
Sbjct: 255 FCQIATCQDYGGNDRV 270


>gi|171462957|ref|YP_001797070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171192495|gb|ACB43456.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 280

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 8/218 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDL 104
           LK E I  ++G R F+N+ L ++     PRPETELLV+      L  I + +   RILDL
Sbjct: 64  LKGEPIAYLIGKRGFHNIDLFVAPGVLIPRPETELLVE----IGLQEIRRLNAPTRILDL 119

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG- 163
           GTG+GA+ LA+  E+P       D S +AL+IAK+NA    ++ + + LQ  W+ ++EG 
Sbjct: 120 GTGSGAIALAIAHEAPQAMVTATDQSNQALDIAKTNAKQLMLTNQVEFLQGSWYEAIEGN 179

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD+I+SNPPYI S  +     ++R F+P  +L    D LS   TI  G  +HL  +GL
Sbjct: 180 APFDIILSNPPYIASQDLHLKQGDLR-FEPLSALTDHKDSLSCLETIISGARQHLQLNGL 238

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +VE  ++Q   VV + +      + A  D GG+ RV+
Sbjct: 239 IAVEHSFDQSDAVVALMKQAGFHNIQAHFDLGGHYRVV 276


>gi|332532478|ref|ZP_08408356.1| methylase of polypeptide chain release factors [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038121|gb|EGI74568.1| methylase of polypeptide chain release factors [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 279

 Score =  134 bits (336), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 124/237 (52%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L D Q+      I R LK E +  I G R+F+++ L +++ T  PRP+TE LV+ A
Sbjct: 46  PEHALSDEQQSQFNVFIQRRLKGEPVAHITGLREFWSLSLEVNATTLIPRPDTETLVEQA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP   K     +LDLGTGTGA+ LAL  E P ++   VD    A+ +A  N     
Sbjct: 106 LEIALPATAK-----VLDLGTGTGAIALALGSEMPSWQITAVDRVSDAVALATRNQQRLA 160

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++      QS+WFS + G  F++IV+NPPYIES  +     +VR F+P  +L     G+S
Sbjct: 161 IN-NVHVKQSNWFSELHGEKFNLIVTNPPYIESSDIHLNQGDVR-FEPLSALVADDCGMS 218

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             + I      +L+ +G   +E G+ Q   V   FE      +   KD G NDRV L
Sbjct: 219 DIKQIITQSRDYLSSNGYLLIEHGFEQGEAVRHFFEKMAFVNIKTVKDLGNNDRVTL 275


>gi|85860526|ref|YP_462728.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus
           aciditrophicus SB]
 gi|85723617|gb|ABC78560.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus
           aciditrophicus SB]
          Length = 316

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  K E +  I+G ++F+++   +      PRP+TE+LV+  +         R    I
Sbjct: 89  VARRQKGEPVAYIIGRKEFWSLDFAVDPRVLIPRPDTEVLVEEVIKVLGSGRASRP--EI 146

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ +AL  E P  +    DIS KAL ++  NA  +GV+ R   L+ +    V
Sbjct: 147 LDLGTGSGAIAVALAHECPHARITATDISRKALAVSAGNAERHGVASRITFLEGNLLDPV 206

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G FDVIVSNPPYI+S     L  EVR+F+PR +L  G  G+  Y  I    +  L   G
Sbjct: 207 MGKFDVIVSNPPYIDSGDYARLSAEVRNFEPREALLAGEQGMDFYSAIIPQAACRLKPGG 266

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVL 260
              +EIG +QK ++ R+F+    +   AF KDY G  RV+
Sbjct: 267 WLLLEIGDSQKENLNRLFQQSDAYQDLAFRKDYAGRWRVV 306


>gi|55822720|ref|YP_141161.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066]
 gi|55738705|gb|AAV62346.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066]
          Length = 277

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L +   +   H+    ILG+ +F+ +R  +      PRPETE LVD  LA + P  E  
Sbjct: 54  LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LD+GTG+GA+ ++L K  P ++    D+S  AL +AK NA  N V   F  + +D
Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +V G FD+IVSNPPYI     D +GL V   +P+++L    DGL+ YR I +   ++
Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           LN  G    EIGY Q  D+ ++    F  +    V   KD  G DR+++ 
Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273


>gi|258621066|ref|ZP_05716100.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586454|gb|EEW11169.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 286

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L++     L   + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
             G+D+  +A+E+A+ NA    + + +F  LQ  WFS +     F +IVSNPPYIE    
Sbjct: 140 VTGIDLRPEAVELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 V   +DY GNDRV L
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277


>gi|219682102|ref|YP_002468486.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219621835|gb|ACL29991.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|311085915|gb|ADP65997.1| HemK protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086486|gb|ADP66567.1| HemK protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087069|gb|ADP67149.1| HemK protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
 gi|311087621|gb|ADP67700.1| HemK protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 277

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 138/256 (53%), Gaps = 7/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  VT  +   +I+  +  L ++Q  +L + I R    E I  I+  ++F+++ L
Sbjct: 23  ESELLLSYVTKHTRSFIIISDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S DT  PRP+TE+LV+ AL+    +I K +   ILDLGTG GA+ LAL   +  +  +
Sbjct: 83  CVSYDTLIPRPDTEILVERALS----KI-KSNSACILDLGTGCGAIALALASINSNWNII 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL IA+ NA      +      SDWFS+++  F++IVSNPPY+    +     
Sbjct: 138 GIDKSENALAIARINASKLNF-KNVTFFFSDWFSNIKKKFNIIVSNPPYVSKKEIKFFKK 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++  F+P  +L    +GLS    I      +L   G   +E G+ QKV V  +F+     
Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255

Query: 246 LVNAFKDYGGNDRVLL 261
            + +++DYGGNDRV +
Sbjct: 256 EIESYQDYGGNDRVTI 271


>gi|269961570|ref|ZP_06175932.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833611|gb|EEZ87708.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 285

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 134/261 (51%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R +  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPERALETEQQAQFDALLERRIAGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTFGQTGP-----ILDLGTGTGAIALALASEMPNRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           G+D+  +A E+A+ NA    +    FD  Q  WF  +     F +IVSNPPYI+      
Sbjct: 144 GIDLKQEAKELAEHNASQLNIKNVTFD--QGSWFEPIASGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLQEGGWLAFEHGYDQGEAVREIMTHF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L C
Sbjct: 261 GFEQVVTEKDYGDNDRVTLGC 281


>gi|329766952|ref|ZP_08258480.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341]
 gi|328837677|gb|EGF87302.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341]
          Length = 280

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 122/213 (57%), Gaps = 11/213 (5%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G+  FY+ +  ++ D   PR ETE L+   + + +  I K ++ +ILDL TG+G + + L
Sbjct: 74  GFEYFYDRKFKVTKDVLSPRMETEELIYKVIEY-IKSINKNNI-KILDLCTGSGIIGITL 131

Query: 116 LKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            KE  S   K V  DIS +AL++AK NA+ N    +F  +QSD F ++   FD+IVSNPP
Sbjct: 132 RKELESKSLKVVASDISEEALKVAKENAIMNEAEVKF--IQSDIFENINEKFDIIVSNPP 189

Query: 174 YIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI     D + +E  V ++DP ++L    DG+  YR I +    +LNKDG+   EIGY+Q
Sbjct: 190 YI--AYSDKITMEDNVLNYDPHLALFAEEDGMYFYREIVENSKEYLNKDGMIFFEIGYDQ 247

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  ++++    + F    +KD  G DR+ +  R
Sbjct: 248 REKILKLANENE-FKAEVYKDINGRDRMAILER 279


>gi|292488089|ref|YP_003530966.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia amylovora CFBP1430]
 gi|292899300|ref|YP_003538669.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291199148|emb|CBJ46262.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291553513|emb|CBA20558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia amylovora CFBP1430]
          Length = 281

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DSVLD      L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP++E+LV+ ALA  LP         ILDLGTG+GA+ LAL  E P  + 
Sbjct: 82  LNVTPDTLIPRPDSEVLVEQALAH-LPDA----ACSILDLGTGSGAIALALASERPDCQI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
            G+D    A+ +A+ NA   G++     +  +WFS+++   F VIVSNPPYI++      
Sbjct: 137 SGIDRIPAAVALAQHNAARLGLANA-TFMPGNWFSALKPQQFAVIVSNPPYIDAADKHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I     
Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDNH 254

Query: 244 LFLVNAFKDYGGNDRV 259
              +   +DYGGNDRV
Sbjct: 255 YCRIETCQDYGGNDRV 270


>gi|262166265|ref|ZP_06034002.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223]
 gi|262025981|gb|EEY44649.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223]
          Length = 286

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L++     L + + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNSLLTRRMAGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
             G+D+  +A E+A+ NA    + + +F  LQ  WFS +     F +IVSNPPYIE    
Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 V   +DY GNDRV L
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277


>gi|116627621|ref|YP_820240.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMD-9]
 gi|116100898|gb|ABJ66044.1| Methylase of polypeptide chain release factor [Streptococcus
           thermophilus LMD-9]
 gi|312278143|gb|ADQ62800.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus thermophilus ND03]
          Length = 277

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L +   +   H+    ILG+ +F+ +R  +      PRPETE LVD  LA + P  E  
Sbjct: 54  LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LD+GTG+GA+ ++L K  P ++    D+S  AL +AK NA  N V   F  + +D
Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +V G FD+IVSNPPYI     D +GL V   +P+++L    DGL+ YR I +   ++
Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           LN  G    EIGY Q  D+ ++    F  +    V   KD  G DR+++ 
Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273


>gi|296327944|ref|ZP_06870479.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
 gi|296154900|gb|EFG95682.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
          Length = 383

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 144 VLRAKKRKPLQYILGEWEFYGLPFKMSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 199

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+++A  N + N + E  + ++S+ F  +
Sbjct: 200 LDIGSGSGAISIAVANELKSSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKL 258

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  Y+ I+     +L  
Sbjct: 259 DKDFKYDLIVSNPPYISKEEYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKD 318

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I +     +++  KDYGGNDRV++
Sbjct: 319 TGYLAFEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 360


>gi|254504444|ref|ZP_05116595.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11]
 gi|222440515|gb|EEE47194.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11]
          Length = 280

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 118/217 (54%), Gaps = 4/217 (1%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            + L  + + RILG R+FY     L+  T EPRP+TE L+++ L    P       + + 
Sbjct: 62  AQRLNGKPVGRILGEREFYGRTFRLNHATLEPRPDTETLIETVLKDCDPT----RPLTMC 117

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTGA+ + LL E      V VDIS  AL  A SNA  +GV  RF  ++SD+ ++++
Sbjct: 118 DIGTGTGAIAVTLLAELQKAVMVAVDISEDALGCAVSNAENHGVGARFLPVRSDYAAALQ 177

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD ++SNPPYI + ++  L  EV   DP ++LDGG DGL  YR I    +  L   G 
Sbjct: 178 HGFDWVISNPPYIRTPVLRELSKEVLQHDPILALDGGADGLEGYRQIVSQAASVLVPGGR 237

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            ++EIG +Q  ++           ++  +D G  DRV
Sbjct: 238 IALEIGRDQGEELKNQLRHHGFEAIDIIQDLGRRDRV 274


>gi|197335225|ref|YP_002155530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio fischeri MJ11]
 gi|197316715|gb|ACH66162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio fischeri MJ11]
          Length = 284

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ D +       + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  +      ILDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+E+AK NA  N ++   +  Q  WF   S+   FD+IVSNPPYI+       
Sbjct: 142 GVDYQDDAVELAKENAKINHIN-NVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G S    I      +L   G   +E G+ Q   +   FE   
Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DY GNDRV L
Sbjct: 260 YINVKTEQDYTGNDRVTL 277


>gi|55820817|ref|YP_139259.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311]
 gi|55736802|gb|AAV60444.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311]
          Length = 277

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 124/230 (53%), Gaps = 14/230 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L +   +   H+    ILG+ +F+ +R  +      PRPETE LVD  LA + P  E  
Sbjct: 54  LLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRPETEELVDLILAEN-PNTE-- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LD+GTG+GA+ ++L K  P ++    D+S  AL +AK NA  N V   F  + +D
Sbjct: 111 --LKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVLAKDNAKLNRVDISF--VLAD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +V G FD+IVSNPPYI     D +GL V   +P+++L    DGL+ YR I +   ++
Sbjct: 167 VFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMALFADEDGLAIYRQILEDADKY 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           LN  G    EIGY Q  D+ ++    F  +    V   KD  G DR+++ 
Sbjct: 227 LNPQGKLYFEIGYKQGEDLRKLLSLHFPDKH---VRVLKDQFGQDRMVVM 273


>gi|253990003|ref|YP_003041359.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781453|emb|CAQ84616.1| protein methyltranferase hemk (protein-glutamine n
           methyltransferase) [Photorhabdus asymbiotica]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 137/260 (52%), Gaps = 12/260 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT  S   ++   ++ +   Q   L   + R  K E I  I G R+F+++ 
Sbjct: 23  RDAEILLGFVTRHSRTYILAFGETQISPEQFSQLETLLARRAKGEPIAYITGEREFWSLS 82

Query: 65  LTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           LT+S  T  PRP+TE LV+ AL   SL         RILDLGTGTGA+ LA+  E    +
Sbjct: 83  LTVSPATLIPRPDTECLVEKALECLSL------TPCRILDLGTGTGAIALAIASERSDCQ 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
             GVDI+  A+ +A+ NA    + +  D L S+WFSS+    FD+IVSNPPYI+      
Sbjct: 137 VTGVDINPDAVMLAQGNAEKLKI-QNVDFLNSNWFSSLNNQQFDMIVSNPPYIDEADPHL 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFES 241
              +VR F+P  +L     G +  +TI D     L  DG   +E G+ Q  DVVR +F  
Sbjct: 196 FQGDVR-FEPDSALIAAEQGTADLKTIIDLSRNFLLPDGWLLLEHGWKQG-DVVRSLFSE 253

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V  F+DYGGN+R+ L
Sbjct: 254 SGYQQVATFQDYGGNERITL 273


>gi|227111331|ref|ZP_03824987.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 281

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   ++ L+  ++  LT  ++R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRTFLLAFGETELNTAEQQQLTELLLRREQGEPIAYLIGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP+        +LDLGTGTGA+ LAL  E    + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CAVLDLGTGTGAIALALASERHDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
            GVD+   A+ +A  NA   G+      L   W+S ++   F +I SNPPYI++  V   
Sbjct: 137 TGVDVQPDAVALATKNAQQLGLG-NVHFLSGSWYSPLDHTRFALIASNPPYIDADDVHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  RTI +    +L+ DG   +E G+ Q   V ++  +R 
Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDDGWLLLEHGWQQADAVRQLLHARG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              +   +DYGGNDRV L
Sbjct: 255 FTQIETCQDYGGNDRVSL 272


>gi|323704814|ref|ZP_08116391.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535740|gb|EGB25514.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 279

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 142/260 (54%), Gaps = 14/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNV 63
           ++   L  + G+    +IV+ D  L   +  F     +  L+ + +    I+G + F  +
Sbjct: 24  EAEGLLSFLLGVGREYIIVNRDKEL--SENIFERYKGLLDLRKDGMPYQYIVGKKHFMGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S +   PR +TE+LV+  L     R++K DVV  LD+GTG+GA+ +++ K     K
Sbjct: 82  IFKVSPNVLIPRNDTEVLVEEVLK----RLQKNDVV--LDIGTGSGAIAVSIAKYKDV-K 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
              VDIS  AL +A+ NA  NGV ++   L+SD FSSV  +  FDVIVSNPPYI S  +D
Sbjct: 135 VYAVDISDDALSVARDNAYENGVLDKIVFLKSDLFSSVPKDVKFDVIVSNPPYIRSGDID 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  +P+I+LDGG DGL  YR I      ++   G+ + E+GY++  DV RI   
Sbjct: 195 KLQEEVKK-EPKIALDGGEDGLLFYRKIVRDSKEYIKSSGIIAFEVGYDEAGDVSRILLD 253

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   KD  G DRV+L
Sbjct: 254 GGYGNIEIVKDLQGIDRVVL 273


>gi|313905738|ref|ZP_07839098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium cellulosolvens 6]
 gi|313469445|gb|EFR64787.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium cellulosolvens 6]
          Length = 282

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 117/217 (53%), Gaps = 8/217 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L H  +  I G   F      ++ D   PR +TE+LV+ AL    P +      RILD
Sbjct: 68  RRLGHLPVQHITGEAWFCGYSFYVTEDVLIPRQDTEVLVEEALRVLRPGM------RILD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162
           + TG+G + L+LLK      G  VD+S  AL +A+ N    G++E +   L SD F  VE
Sbjct: 122 MCTGSGCILLSLLKGREV-TGTAVDLSPAALAVAEENRKRLGIAEDQVKFLHSDLFEKVE 180

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G +D+IV+NPPYI + +   L  EVRD +P ++LDG  DGL   R IA+    +L KD +
Sbjct: 181 GCYDMIVTNPPYIPTEVCQELDPEVRDHEPMMALDGREDGLYFERKIAEDAKAYLKKDAM 240

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
             +EIGY+Q   +  I  S     V   +D GGNDRV
Sbjct: 241 IFMEIGYDQGDAMREILLSLGYKDVRIVRDLGGNDRV 277


>gi|312172220|emb|CBX80477.1| K02493 methyltransferase [Erwinia amylovora ATCC BAA-2158]
          Length = 295

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 135/256 (52%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DSVLD      L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP++E+LV+ ALA  LP         ILDLGTG+GA+ LAL  E P  + 
Sbjct: 82  LNVTPDTLIPRPDSEVLVEQALAH-LPDA----ACSILDLGTGSGAIALALASERPDCQI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
            G+D    A+ +A+ NA   G++     +  +WFS+++   F VIVSNPPYI++      
Sbjct: 137 SGIDRIPAAVALAQHNAARLGLANA-TFMPGNWFSALKPQQFAVIVSNPPYIDAADKHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I     
Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDNH 254

Query: 244 LFLVNAFKDYGGNDRV 259
              +   +DYGGNDRV
Sbjct: 255 YCRIETCQDYGGNDRV 270


>gi|254230551|ref|ZP_04923919.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio sp. Ex25]
 gi|262394971|ref|YP_003286825.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25]
 gi|151936923|gb|EDN55813.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio sp. Ex25]
 gi|262338565|gb|ACY52360.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25]
          Length = 284

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++  
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFNALLERRLAGEPVAYIIGEREFWSLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIAIALASEMPTRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183
           GVD+  +A  +A+ NA    + +     Q  WF  + EG  F +IVSNPPYI+       
Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I     
Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGDAVREIMRGFG 261

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KDYGGNDRV L C
Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281


>gi|319779046|ref|YP_004129959.1| Methylase of polypeptide chain release factor [Taylorella
           equigenitalis MCE9]
 gi|317109070|gb|ADU91816.1| Methylase of polypeptide chain release factor [Taylorella
           equigenitalis MCE9]
          Length = 275

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 17/261 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  V G+    + V  D ++ + Q+      + R L+ E I  ++G R+F  + L
Sbjct: 19  ESQIILAHVLGVDRVWLFVHDDVLICEEQKLEFDTLVQRRLEGEPIAYLVGSREFMGLEL 78

Query: 66  TLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +    PRP+TELLV+ AL F  + P        RILDLGTG+GA+ +++    P  +
Sbjct: 79  NVDNSVLIPRPDTELLVECALDFLKTTPT-----GARILDLGTGSGAIAISIANFMPKCE 133

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              VDIS +AL++A  NA  +GV  +F   +  WF ++    G FD+IVSNPPYI S   
Sbjct: 134 VYAVDISKEALKVAYLNAKNHGVHIKF--FEGSWFDALPYDVGTFDLIVSNPPYIAS--- 188

Query: 181 DCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           D + L++ D  ++P  +L GG DGLS Y  I   V   ++       E G+ Q  ++ RI
Sbjct: 189 DDIHLQLGDVRYEPITALVGGNDGLSEYIKIMKQVHDFIHSGSAIMFEHGWTQGAELRRI 248

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
            E      +N  KD  G++RV
Sbjct: 249 LEQGHCHKINTHKDLAGHERV 269


>gi|114768931|ref|ZP_01446557.1| HemK [alpha proteobacterium HTCC2255]
 gi|114549848|gb|EAU52729.1| HemK [alpha proteobacterium HTCC2255]
          Length = 277

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 122/230 (53%), Gaps = 8/230 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           DD   +F T  I + L+ + I +I+G R F+  +  +S +  +PRP+TE L++  L+   
Sbjct: 50  DDIYNYFKT-LINKRLEFQPISQIIGERYFWKNKFIVSPNVLDPRPDTETLIEHTLS--- 105

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +     ILDLGTG+G + L+LL E     GVG+D S  AL +AK NA    +S+R 
Sbjct: 106 ----QGKFYNILDLGTGSGCIILSLLDEYKDAIGVGIDKSEDALNVAKQNANLLSLSQRV 161

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                +W   ++  FD+I+SNPPYI    +  L   V +++PRI+L    DGL  YR I 
Sbjct: 162 SFNLGNWCEGIKEKFDLIISNPPYISENDMKILSKSVLNWEPRIALTPEGDGLGAYRHIL 221

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DG    L  +G   +EIGY+Q   V  + ++     +   KD    DRVL
Sbjct: 222 DGAKNLLIPNGKLILEIGYDQGKKVTHLLKNHGYKDIKLVKDINNKDRVL 271


>gi|89094906|ref|ZP_01167838.1| Methylase of polypeptide chain release factor [Oceanospirillum sp.
           MED92]
 gi|89080863|gb|EAR60103.1| Methylase of polypeptide chain release factor [Oceanospirillum sp.
           MED92]
          Length = 283

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 17/259 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC V       +   P+  L   ++  L   + R LK E +  I+G R F++  L
Sbjct: 23  DMQYLLCHVLDKPESYLFTWPERELQPGEQESLEQLLQRRLKGEPVAHIIGKRGFWSFEL 82

Query: 66  TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +S  T  PRP+TE+LV+ AL   SLP        R++DLGTGTGAV LAL KE+P ++ 
Sbjct: 83  EVSPHTLIPRPDTEVLVEKALELCSLP------AARVVDLGTGTGAVALALAKENPGWEV 136

Query: 125 VGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              D   +A E+A+ N     +TN        LQ  W+    G FD+IVSNPPYI+    
Sbjct: 137 FASDYVKEAAELAERNRQRLHITN-----MQVLQGSWYEPHSGRFDMIVSNPPYIDPEDP 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L     G++    IA      LNK+G+ + E G++Q      + +
Sbjct: 192 HLDQGDVR-FEPLSALTAENQGMADIELIAKQGRNFLNKNGVLAFEHGFDQGPICRNLLQ 250

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +     V   +DYG N+RV
Sbjct: 251 TLGYLEVGTQRDYGQNERV 269


>gi|331002271|ref|ZP_08325790.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral
           taxon 107 str. F0167]
 gi|330411365|gb|EGG90781.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral
           taxon 107 str. F0167]
          Length = 275

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 129/224 (57%), Gaps = 13/224 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + + L +  +  I+    F  + L +  +   PR +TE+LV+  L       +K  
Sbjct: 58  LKEYVEKRLTNMPVQYIVNKAYFCGLPLYVDENVLIPRFDTEVLVEEVLNLG----DKNK 113

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             +ILD+ TG+GA+ +AL K   F +   +DIS +AL+IAK NA    +    + L+SD 
Sbjct: 114 --KILDVCTGSGAIAIALKKLGKFERVDALDISEEALKIAKKNA--KALECDINFLKSDM 169

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           FSS+  E  +D+IVSNPPYI+S IVD L  +V+DF+PR++LDG IDG+  Y+ I      
Sbjct: 170 FSSLTSENKYDIIVSNPPYIQSHIVDSLERQVKDFEPRLALDGDIDGMKFYKIIEKNFMN 229

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            L+  G+  +EIGY++  D+  +FE +K+ +    KD  G DRV
Sbjct: 230 FLSPGGILGLEIGYDEASDIKNLFEDKKVIIK---KDLAGLDRV 270


>gi|296101960|ref|YP_003612106.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056419|gb|ADF61157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 276

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 133/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q   L+  + R    E +  ++G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKARTYLLAFGETELTVEQEAQLSALLARRKTGEPVAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S+ T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LFVSAATLIPRPDTECLVEQALA-RLPAAAS----RILDLGTGTGAIALALATERPDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A+ N    GV+     LQS WFS++E   F +IVSNPPYI+       
Sbjct: 137 TAVDVMPDAVALAQRNVERLGVT-NVTVLQSSWFSALEKQTFAMIVSNPPYIDEHDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I     +HL   G   VE G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPLTALVAGNAGLADLEHIVTTSRQHLLPGGWLLVEHGWTQGEAVRGLFRQTG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YAAVETCRDYGGNERLTL 272


>gi|330811718|ref|YP_004356180.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379826|gb|AEA71176.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 276

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 129/244 (52%), Gaps = 18/244 (7%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++        +  + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PERIVPSEAALLFSEYLRRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA  LP        R+LDLGTG+GA+ LAL  E P +K   VD   +A+ +A+ N     
Sbjct: 102 LAL-LPATP----ARVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVALAERN----- 151

Query: 146 VSERFD-----TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             +R D      L S WFS++E   F++I+SNPPYI +     +  +VR F+P  +L  G
Sbjct: 152 -RQRLDLHNVTVLSSHWFSALEDTRFELIISNPPYIAASDPHLIEGDVR-FEPASALVAG 209

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL   R I      HL+  G   +E GY+Q   V  +  ++    V++ KD GG++R+
Sbjct: 210 PDGLDDLRQIVAQAPAHLDPGGWLMLEHGYDQAEAVRDLLRTQGFVEVHSRKDLGGHERI 269

Query: 260 LLFC 263
            L C
Sbjct: 270 SLGC 273


>gi|260220344|emb|CBA27787.1| Protein hemK homolog [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 292

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 116/230 (50%), Gaps = 9/230 (3%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +L ++    LT    R L  E +  ++G ++FY + L +S+D   PRP+TE LV+    +
Sbjct: 61  LLSEQALITLTRLANRRLAGEPVAYLVGHKEFYGLNLQVSADVLVPRPDTETLVE----W 116

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +L  +E     R++DLGTG+GA+ LAL    P  +   VD S  AL +A+ NA   G+  
Sbjct: 117 ALETLEPTPHARVVDLGTGSGAIALALKATRPELQVEAVDFSHAALAVAQGNAQRLGLEV 176

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            F   Q  W  S EG F +IVSNPPYI     D   L    F+PR +L  G DGL   RT
Sbjct: 177 AFG--QGSWLGSAEGKFQLIVSNPPYIRE---DDEHLPALRFEPRQALTAGTDGLDDIRT 231

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           I      HL   G    E GY+Q  DV  +  +     V + +D  G +R
Sbjct: 232 IIRQAPEHLLAGGWLLFEHGYDQAGDVRGLLAAAGFSEVQSRRDLAGIER 281


>gi|262404523|ref|ZP_06081078.1| Polypeptide chain release factor methylase [Vibrio sp. RC586]
 gi|262349555|gb|EEY98693.1| Polypeptide chain release factor methylase [Vibrio sp. RC586]
          Length = 286

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L++     L   + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEESALVSLNALLARRITGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
             G+D+  +A E+A+ NA    + + +F  LQ  WFS + G   F +IVSNPPYIE    
Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLAGGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPHFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 V   +DY GNDRV L
Sbjct: 257 DLGYQSVTTEQDYAGNDRVTL 277


>gi|269965454|ref|ZP_06179573.1| HemK protein [Vibrio alginolyticus 40B]
 gi|269829933|gb|EEZ84163.1| HemK protein [Vibrio alginolyticus 40B]
          Length = 284

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++  
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFDALLERRLTGEPVAYIIGEREFWSLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPILDLGTGTGAIAIALASEMPKRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183
           GVD+  +A  +A+ NA    + +     Q  WF  + EG  F +IVSNPPYI+       
Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I     
Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGFG 261

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KDYGGNDRV L C
Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281


>gi|268317361|ref|YP_003291080.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252]
 gi|262334895|gb|ACY48692.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252]
          Length = 304

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 128/261 (49%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   LC V G S  Q+   P+  +D  +R      + R L+ E +  +LG+ +F  
Sbjct: 37  ARRNAEWMLCEVLGCSRAQLYAYPERPVDAARRARFAELLARRLRREPLQYVLGYVEFLG 96

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +      PRPETE L +  L      ++     R+LD+GTG+G + LA+       
Sbjct: 97  LRLEVGPGVLVPRPETEWLTERVLQ----ELQSTPGPRVLDVGTGSGCIALAIKHHRSDA 152

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                DIS +AL IA+ NA   G+   +   D L   +  +V G FD+IVSNPPY+    
Sbjct: 153 DVWACDISPEALSIARRNAERLGLQVHWVEADVLADSFPENVPGPFDLIVSNPPYLALHE 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  EVRD++P ++L  G D L  YR +A      L   G  + E+  +   DVV +F
Sbjct: 213 ADELPPEVRDYEPPVALYAGEDPLRFYRALARHGHVLLKPGGRLACEVHAHYGTDVVALF 272

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+     V    D  GN R++
Sbjct: 273 EACGYEAVRLECDLAGNPRLV 293


>gi|19704666|ref|NP_604228.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714974|gb|AAL95527.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 354

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 129/222 (58%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   +S     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 115 VLRAKKRKPLQYILGEWEFYGLPFKMSEGVLIPRADTEILVEQCIQL-MREVEEPN---I 170

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+++A  N + N + E  + ++S+ F  +
Sbjct: 171 LDIGSGSGAISIAVANELKSSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKL 229

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI     + L  EV++++P+ +L    DGL  Y+ I+     +L  
Sbjct: 230 DKDFKYDLIVSNPPYISKDEYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKD 289

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I +     +++  KDYGGNDRV++
Sbjct: 290 TGYLAFEIGYNQAKDVSKILQDNNFAILSIVKDYGGNDRVII 331


>gi|257466435|ref|ZP_05630746.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917591|ref|ZP_07913831.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691466|gb|EFS28301.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 368

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 119/221 (53%), Gaps = 6/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    + +  ILG  +FY            PR +TE+LV+ A   SL    +++  +I
Sbjct: 146 IQRGKFRKPLQYILGKWEFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPKI 201

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTGTGA+ + L KE P  + +G+DIS +AL +AK N     V      LQS+ F  +
Sbjct: 202 LDIGTGTGAIAITLAKEVPEAEVLGIDISERALSLAKENKEYQFVR-NVSFLQSNLFEKL 260

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           EG  FD+IVSNPPYI     + L  EV++++P+ +L    DG S Y+ I    + +LN+ 
Sbjct: 261 EGKSFDIIVSNPPYIPQEEYEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANGYLNEK 320

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G    E+GY Q   V +  E  K   +   +DY G+ RV+L
Sbjct: 321 GYLLFEVGYQQAEQVKQWMEEEKFEDLYIAEDYAGHQRVVL 361


>gi|325568364|ref|ZP_08144731.1| protein-(glutamine-N5) methyltransferase [Enterococcus
           casseliflavus ATCC 12755]
 gi|325158133|gb|EGC70286.1| protein-(glutamine-N5) methyltransferase [Enterococcus
           casseliflavus ATCC 12755]
          Length = 285

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+HE    +LG+ +FY  RL ++  T  PRPETE LV++ LA    ++     +R++D+G
Sbjct: 65  LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLA----KLPADQPLRVVDIG 120

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164
           TGTGA+ +AL    P +    VD+S +AL +AK NA   G   RF   Q D    V +  
Sbjct: 121 TGTGAIAIALKLARPQWSVSAVDLSAEALAVAKENATALGAEIRF--FQGDTLEPVADQQ 178

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IVSNPPYI +     + + VR+ +P+++L     GL+ Y+ +A    + L   G  +
Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPKCLAPSGQMA 238

Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           +EIG+ Q   V ++F +      V   KD  G DR++
Sbjct: 239 LEIGFQQGQAVQQLFAAAFPNKEVTVVKDLAGQDRMV 275


>gi|269138758|ref|YP_003295459.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|267984419|gb|ACY84248.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|304558751|gb|ADM41415.1| hypothetical protein ETAF_1303 [Edwardsiella tarda FL6-60]
          Length = 279

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L   Q   LT+ + R  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRSFLLAFGETRLTAAQLTQLTSLLARREQGEPVAYLIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        +I+DLGTGTGA+ LAL  E P  + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQAL-MRLPAAP----AQIVDLGTGTGAIALALASERPDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             V+ +  A+ +A+ NA   G+S R + LQ  WF+ + G  F +IVSNPPYI++      
Sbjct: 137 SAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+  R IA     HL   G   +E G+ Q   V  +     
Sbjct: 196 QGDVR-FEPASALVAAEQGLADLRAIARQAPDHLEPGGWLLLEHGWQQGAAVRALLTEYG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V + +DYG N+RV L
Sbjct: 255 FCCVESVRDYGDNERVTL 272


>gi|291612729|ref|YP_003522886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sideroxydans lithotrophicus ES-1]
 gi|291582841|gb|ADE10499.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sideroxydans lithotrophicus ES-1]
          Length = 286

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 11/241 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++  P+ VLD  Q+    N + R L+ E +  ILG R+F+ +   ++  T  PRPETELL
Sbjct: 45  LLAHPEQVLDATQQASYANLLQRRLQGEPVAHILGEREFFGLNFKVTPATLIPRPETELL 104

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+     +L RI      R+LD+GTG+GA+ L++    P  + V VD S  ALE+A+ NA
Sbjct: 105 VE----LALQRIPAHGHFRVLDMGTGSGAIALSIAHARPEAEVVAVDASGAALEVARENA 160

Query: 142 VTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           V  G+      ++SDW++++ +  + +IVSNPPYIE+        ++R F+P  +L  G 
Sbjct: 161 VRLGI-RNATFIRSDWYAALDDKRYGLIVSNPPYIETGDAHLTQGDLR-FEPPSALASGA 218

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDR 258
           DG+   R I     R L       +E GY Q  + VR+   +  F  N F  KD  G +R
Sbjct: 219 DGMDDIRRIVGQAHRFLELGSWLLLEHGYEQ-AETVRLLLGQNGF-ANVFSVKDIAGIER 276

Query: 259 V 259
           V
Sbjct: 277 V 277


>gi|262170843|ref|ZP_06038521.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451]
 gi|261891919|gb|EEY37905.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451]
          Length = 286

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 133/261 (50%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L++     L   + R +  E I  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPIAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
             G+D+  +A E+A+ NA    + + +F  LQ  WFS +     F +IVSNPPYIE    
Sbjct: 140 VTGIDLRPEAAELAQENATRLSILNTQF--LQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNLGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 V   +DY GNDRV L
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTL 277


>gi|295697769|ref|YP_003591007.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus tusciae DSM 2912]
 gi|295413371|gb|ADG07863.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus tusciae DSM 2912]
          Length = 296

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 123/235 (52%), Gaps = 7/235 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            + RV G+    +   PD VL   +   +   + R  + E +  I G  +FY + L +  
Sbjct: 29  LIQRVLGVGKAHLYAHPDRVLTQEEERRIAEGVSRRARREPLQYITGVVEFYGLELEVGP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETE LV+  L +    + +R +  I D+GTG+GA+ +AL    P  + VG+D+
Sbjct: 89  DVLIPRPETEGLVERVLGWR--SMWERPL--IADVGTGSGALAVALAHHWPGARIVGIDV 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLE 186
           S  A ++A  N   +G+++R   +Q D    +       D++VSNPPYI S  +D L  E
Sbjct: 145 SPGAFQVASRNIRRHGLADRVSLVQGDLLFPLLDHGQRADIVVSNPPYIPSGDIDGLQPE 204

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           V  F+PR +LDGG DGL  YR +   +   L++ G  +VE+G  Q   V R+ E 
Sbjct: 205 VARFEPRAALDGGGDGLDVYRRLFFQLPEVLSRPGAVAVEVGAGQAGAVRRLLEQ 259


>gi|15893237|ref|NP_360951.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia conorii str. Malish 7]
 gi|229587214|ref|YP_002845715.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia africae ESF-5]
 gi|32129602|sp|Q92G13|HEMK_RICCN RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; AltName: Full=M.RcoHemKP;
           Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|15620455|gb|AAL03852.1| possible protoporphyrinogen oxidase [Rickettsia conorii str. Malish
           7]
 gi|228022264|gb|ACP53972.1| Methylase of polypeptide chain release factors [Rickettsia africae
           ESF-5]
          Length = 524

 Score =  133 bits (334), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 21/262 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSALAFSL------------PRIEKRDV--------VRILDLGTGTGAVCLALLKESPF 121
           VD                   P     D+        + IL+LGTG+G + ++LL E P 
Sbjct: 103 VDVVFQCHSRESGNPEKKQPNPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELPN 162

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              +  DIS  A++I KSNA    V++R   + S+WF ++E   FD IVSNPPYI     
Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             + +E  +++P I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+  V +IF 
Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                + + +KD  G+ RV+LF
Sbjct: 283 DHGYNIESVYKDLQGHSRVILF 304


>gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella
           sp. PE36]
 gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella
           sp. PE36]
          Length = 279

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 14/242 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D V+DD      T  I+R    E +  ILG+R+F+++ L +S+DT  PRP+TE+LV+ AL
Sbjct: 45  DKVMDDDIIRRFTALIMRRQAGEPVAHILGYREFWSLELEVSADTLIPRPDTEILVEQAL 104

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  +P        ++LDLGTGTGA+ LAL  ESP      ++    A  +A+ N    G 
Sbjct: 105 A-CMP----THACQVLDLGTGTGAIALALASESPQATVTAIEYQQGAAALARRNVKRCG- 158

Query: 147 SERFD--TLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              FD   LQ  WF  ++    FDVIVSNPPYI++        +VR F+P  +L    +G
Sbjct: 159 ---FDVTVLQGSWFEPLKASQRFDVIVSNPPYIDAHDPHLAMGDVR-FEPLTALVAADNG 214

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L+  + I     + L  DG   VE G+ Q   V  +F +     V   KDYG NDR+ + 
Sbjct: 215 LADLKHIISQGYQFLTVDGWLLVEHGFEQGAAVRALFTASNYHQVVTHKDYGNNDRITVG 274

Query: 263 CR 264
            R
Sbjct: 275 QR 276


>gi|262372380|ref|ZP_06065659.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter junii SH205]
 gi|262312405|gb|EEY93490.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter junii SH205]
          Length = 272

 Score =  132 bits (333), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 137/259 (52%), Gaps = 12/259 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  + G++S ++ +  +  L + Q     N + R    E +  + G + F+ + 
Sbjct: 19  QEAAWLLEHILGINSLELKLRLEQELTEIQEQAYLNGLARIDHGEPLAYVTGSQPFWTLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP+TE+L+++ L     ++E      ++DLGTGTGA+ LAL  E P +K 
Sbjct: 79  LKVTHDTLVPRPDTEILIETVL-----KLELDSTSNVVDLGTGTGAIALALASERPQWKV 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              DI    LE+A+ NA+ +G++  +F      WF ++E   FD+IVSNPPYI+    + 
Sbjct: 134 TATDIYQPTLEVAQENAIRHGLTHVKFAC--GAWFDALEKQFFDLIVSNPPYIDP---ED 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           + +++   +P  +L     GL+   TI       LN +G   +E GY+Q   V  +FE  
Sbjct: 189 VHMQMLKSEPERALIADKQGLADLETIIVQGKSWLNPNGWIVLEHGYDQGEAVRTMFEKE 248

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KDYGGNDRV L
Sbjct: 249 GFSQIQTIKDYGGNDRVSL 267


>gi|152997600|ref|YP_001342435.1| HemK family modification methylase [Marinomonas sp. MWYL1]
 gi|150838524|gb|ABR72500.1| modification methylase, HemK family [Marinomonas sp. MWYL1]
          Length = 282

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLD--DRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L  V  +S+      P+ ++   D +RF     + R    E +  +LG + F+N+
Sbjct: 24  DAQLLLAHVLAVSTSYFYTWPEKLVSTSDVERF--NGLLARRELGEPVAYLLGQQAFWNL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++  T  PR +TE LV+ AL+     ++   V RILDLGTGTGA+ L+L  E P   
Sbjct: 82  DLEVAPCTLIPRADTERLVEVALSV----LDISKVNRILDLGTGTGAIALSLASEQPKST 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVD 181
            +GVD+   A+ +AK NA+ N +S   D LQS WF ++EG   FD+IVSNPPYI+     
Sbjct: 138 VMGVDLVEDAVALAKRNALRNKLS-NVDFLQSSWFDALEGCEPFDLIVSNPPYIDPDDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     G++    I +   + + ++     E GY+Q   V + F  
Sbjct: 197 LSQGDVR-FEPKSALVADNHGMADIEHIIEVAPKFMQQNAYLMFEHGYDQAASVRKCFIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V +F+D+GGNDRV +
Sbjct: 256 AGFAAVESFQDFGGNDRVTI 275


>gi|91228928|ref|ZP_01262826.1| HemK protein [Vibrio alginolyticus 12G01]
 gi|91187511|gb|EAS73845.1| HemK protein [Vibrio alginolyticus 12G01]
          Length = 284

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++  
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEAEQKSQFDALLERRLTGEPVAYIIGEREFWSLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ +AL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----EQTGPVLDLGTGTGAIAIALASEMPKRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183
           GVD+  +A  +A+ NA    + +     Q  WF  + EG  F +IVSNPPYI+       
Sbjct: 144 GVDLKQEAKALAEYNAEQLNI-KNVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I     
Sbjct: 203 QGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGFG 261

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KDYGGNDRV L C
Sbjct: 262 YQQVATEKDYGGNDRVTLGC 281


>gi|224824643|ref|ZP_03697750.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lutiella nitroferrum 2002]
 gi|224603136|gb|EEG09312.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lutiella nitroferrum 2002]
          Length = 270

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 129/258 (50%), Gaps = 10/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L +VTG +  +++  P+  L   Q         R L  E I  +LG R+FY    
Sbjct: 16  ESRLLLMQVTGFTPAKLVGYPELELSPVQEAAFAALAERRLSGEPIAYLLGEREFYGRLF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PRPETE LV++ALA    R+  R   +++DLG G+GA+ + L  E+P ++  
Sbjct: 76  LVSPAVLIPRPETEHLVEAALA----RV-GRSPAQVVDLGCGSGAIAVTLALEAPHWQVS 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183
            VD+S  AL IA+ NA        F   Q  W++ +    +FD+IVSNPPYI +      
Sbjct: 131 AVDVSDAALAIARQNAARLMAPVTF--FQGSWYAPLPPAAVFDLIVSNPPYIAAADRHLE 188

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    DGLS  R IA G    L   G   VE GY+Q   V  +F +  
Sbjct: 189 QGDVR-FEPRRALTDEDDGLSCLREIAAGAPERLLPGGWLMVEHGYDQGDAVRALFHAVG 247

Query: 244 LFLVNAFKDYGGNDRVLL 261
           L  V    D  G DRV L
Sbjct: 248 LAEVETLPDLAGLDRVTL 265


>gi|240147056|ref|ZP_04745657.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis L1-82]
 gi|257200779|gb|EEU99063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis L1-82]
 gi|291538248|emb|CBL11359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis XB6B4]
          Length = 281

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ +  +H  +  I+G  +F  ++  ++S+   PR +TE LV+ AL    P +      +
Sbjct: 60  ALRKRAEHVPLQYIVGEAEFMGLKFKVNSNVLIPRQDTETLVEEALKVVKPGM------K 113

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G + ++++   P  +G   DIS +AL +AK NA  N VS  F+  +SD F +
Sbjct: 114 VLDLCTGSGCIIVSIVHNVPEVEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDN 171

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +DVIVSNPPYI +  V  L  EV++F+P  +LDG  DGL  YR I      +L   
Sbjct: 172 VTGTYDVIVSNPPYIRTGEVVKLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPG 231

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G    EIGY+Q   V  + +      V   KD   NDRV+
Sbjct: 232 GHILFEIGYDQGEAVSGLLKEAGFKNVTVIKDLAHNDRVV 271


>gi|192359316|ref|YP_001981173.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107]
 gi|190685481|gb|ACE83159.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107]
          Length = 265

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 4/255 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC +   +   +   PD +L D         + R    E I  I+G R+F+++ L
Sbjct: 8   DIELILCHLLQKNRTWLYTWPDHLLADESLRQFETCLARRETGEPIAHIIGEREFWSLPL 67

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++ T  PRP+TE++V+  LA S        V R LDLGTGTGA+ LAL  E   ++ +
Sbjct: 68  LVNNSTLIPRPDTEVVVEQVLA-SFAEDAPTQVRRCLDLGTGTGAIALALANEKKHWQVL 126

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            VD S  A+ +A++N V          L SDWFS++    FDVIVSNPPYI+        
Sbjct: 127 AVDRSADAVALARTN-VARLRLPNVQVLCSDWFSAIPAQTFDVIVSNPPYIDPQDPHLEQ 185

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+PR +L  G  GL+    I +    +L   G   +E GY+Q   V  +F +  L
Sbjct: 186 GDVR-FEPRSALVAGNAGLADIEAILEQAPAYLAVGGWLLIEHGYDQGRAVRNLFCASGL 244

Query: 245 FLVNAFKDYGGNDRV 259
             V+  +DY GN+RV
Sbjct: 245 VQVSTRRDYAGNERV 259


>gi|114561907|ref|YP_749420.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333200|gb|ABI70582.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 284

 Score =  132 bits (333), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 127/237 (53%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q    +  I +      +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 50  PERQLTSEQFKAYSQMIAKRQSGTPVAHIIGEREFWSLPFIVNESTLIPRPDTEILVETA 109

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  S+     R   ++LDLGTGTGA+ LAL  E P ++   +D   +A+E+AK+N     
Sbjct: 110 LNLSV-----RHNAKVLDLGTGTGAIALALASERPKWRITAIDKVPEAVELAKANRGNLN 164

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++E  + +QSDWFS+VE   FD+IVSNPPYI+         +VR F+P+ +L  G +G +
Sbjct: 165 LTE-VEIIQSDWFSAVEQRDFDLIVSNPPYIDEADEHLHLGDVR-FEPQSALTAGNEGYA 222

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA+    HL   G   +E GY Q + V           V   +D+G NDR  L
Sbjct: 223 DLYYIAEQARAHLLPGGYLLLEHGYEQAIKVREKLIELGYQNVATVRDFGSNDRCTL 279


>gi|241667854|ref|ZP_04755432.1| HemK family modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876396|ref|ZP_05249106.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842417|gb|EET20831.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 285

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 12/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V  +    + ++ D  LD+     +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLSVDKTYLYLNSDKQLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE++V    A  L  I+ ++  ++ILDLG G+GA+ LAL  E P  +
Sbjct: 86  LYVTKDTLIPRADTEVIV----AAVLDDIQDKNAQLKILDLGAGSGAIALALADELPRSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
            V VD+  K L++AK NA+ N +    + +QS W+ +++G  FD+IVSNPPYI+   VD 
Sbjct: 142 VVAVDLYSKTLDVAKKNALANKIV-NVEFMQSSWYENLDGTKFDIIVSNPPYID---VDD 197

Query: 183 LGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             ++  VR+ +P  +L    +GL+  R I       L + G   +E G+ Q  D+  IF 
Sbjct: 198 ANIDDSVREHEPSRALFAADNGLADIRIIISQAGGFLKQGGYLYIEHGFTQANDIANIFS 257

Query: 241 SRKLFLVNAFKDYGGNDR 258
                 +   KD    DR
Sbjct: 258 QYSFGDIQTIKDLNYKDR 275


>gi|304397560|ref|ZP_07379437.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. aB]
 gi|304354732|gb|EFM19102.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. aB]
          Length = 276

 Score =  132 bits (332), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 135/259 (52%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   ++VL D Q   L + + R  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGYVTGKSRSWLIAFDETVLSDEQLAQLNSLLARRARGEPVAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TELLV+ ALA  LP         ILD+GTGTGA+ LAL  E P  + 
Sbjct: 82  LRVTDATLIPRPDTELLVEQALAH-LPATPS----TILDMGTGTGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
            GVD    A+E+A SNA    +S  RF  L S WF ++    F +IVSNPPYI++     
Sbjct: 137 TGVDRIQAAVELAGSNAQQLSLSNTRF--LLSHWFQALTPQRFSLIVSNPPYIDASDSHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L     GL+  RT+ +     L   G   +E G+ Q   V  +    
Sbjct: 195 EQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMRQN 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    DYGGN RV L
Sbjct: 254 GYHAVETVNDYGGNPRVTL 272


>gi|332188263|ref|ZP_08389991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingomonas sp. S17]
 gi|332011762|gb|EGI53839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingomonas sp. S17]
          Length = 269

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 10/248 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           L +H + ++ +++L D  R         + R    E +  I G R F+ + L +      
Sbjct: 27  LFAHALGIERNALLLDLTRTVPDGFWPLVERREAQEPVAYITGTRGFWTLDLMVGPGALV 86

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR ++E L+ +AL         R    +LDLGTG G + LALL E    KG+GVD S +A
Sbjct: 87  PRVDSETLIAAALQ----HFGGRRPATLLDLGTGPGTLLLALLDEWRETKGLGVDRSAEA 142

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L  A++NA   G+++R   +  DW +++ G FD IV+NPPYI +   + L  EV  F+P 
Sbjct: 143 LGYARANAAACGLADRARFVLGDWAAALTGPFDCIVTNPPYIGT--GESLSHEVHGFEPA 200

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L  G DGL  YR +A  + R +   G C VEIG+ Q   V  + E++ L  V   +D 
Sbjct: 201 SALFAGEDGLDDYRKLAPELRRLVAPGGACVVEIGHEQAPAVTGLLEAQGL-RVALHRDL 259

Query: 254 GGNDRVLL 261
           GG  R LL
Sbjct: 260 GGRPRALL 267


>gi|114327272|ref|YP_744429.1| peptide release factor-glutamine N5-methyltransferase
           [Granulibacter bethesdensis CGDNIH1]
 gi|114315446|gb|ABI61506.1| peptide release factor-glutamine N5-methyltransferase
           [Granulibacter bethesdensis CGDNIH1]
          Length = 288

 Score =  132 bits (332), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 6/241 (2%)

Query: 24  VDPDSVLDDRQR----FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           +D   +L D +R      L   I R  K E +  ILG R+F+ +   ++ DT  PRP+TE
Sbjct: 38  LDATGLLRDSEREVTLPLLDEWITRRAKREPLAYILGAREFWGLSFAVTPDTLIPRPDTE 97

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            L++ ALA   P   +  V R+LDLGTGTG + LA L E     G+G+D    A  +A+ 
Sbjct: 98  TLIEYALALRPP--TQGMVRRVLDLGTGTGCLLLAALHEYRQATGLGIDRMQGAAALARR 155

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           NAV+ G+++R      DW       FD+++SNPPYI    ++ L  +VRD++P  +L  G
Sbjct: 156 NAVSLGMADRAAFCAGDWAFCCADRFDLVLSNPPYIPDRDMEGLMADVRDYEPASALAAG 215

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
             G+  YR I   +   L   G+  +E+G  Q+  V  +     L ++    D GG  R 
Sbjct: 216 EGGMEAYRRIIPSLPDLLTPAGVAILELGIGQEDGVGALAAPAGLRVIGCRVDLGGIARA 275

Query: 260 L 260
           L
Sbjct: 276 L 276


>gi|223983552|ref|ZP_03633735.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM
           12042]
 gi|223964480|gb|EEF68809.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM
           12042]
          Length = 284

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 120/224 (53%), Gaps = 12/224 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R LK E +  +LG+  FY  R  ++ +   PRPETE LV + LA       +   +  +D
Sbjct: 62  RILKQEPMQYVLGYSWFYGYRFQVNENVLIPRPETEELVANILADLDEYFAEAKTIDAVD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+GA+ L+L KE P  +    DIS +A+E+AK+NA + GV  +F  L  D    V  
Sbjct: 122 IGTGSGAIALSLAKEEPKIRMSATDISAEAVEVAKANAASLGVDVKF--LVGDMAQPVID 179

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G+  D+++ NPPYI     + L   V+D++P ++L GG DGL  YR +     + L   
Sbjct: 180 AGMKVDLLICNPPYIPQ--EETLEASVKDYEPHVALFGGEDGLKFYRQVFAAAPQVLKDK 237

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            + + EIG+NQK  ++   E RK F        KD  G DR+L 
Sbjct: 238 AMMAFEIGWNQKAALLA--EVRKTFGDVRAEVVKDINGKDRMLF 279


>gi|257462415|ref|ZP_05626829.1| methyltransferase [Fusobacterium sp. D12]
 gi|317060079|ref|ZP_07924564.1| methyltransferase [Fusobacterium sp. D12]
 gi|313685755|gb|EFS22590.1| methyltransferase [Fusobacterium sp. D12]
          Length = 368

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  +FY            PR +TE+LV+ A   SL    +++   ILD+GTG+GA
Sbjct: 155 LQYILGKWEFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPSILDIGTGSGA 210

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + + L KE P  + +G+D S KAL +AK N     V      LQSD F +++G  FD+IV
Sbjct: 211 IAITLAKEVPEAEVLGIDKSEKALSLAKENKEYQLVR-NVSFLQSDLFEALQGQRFDIIV 269

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI     + L  EV+ ++P+ +L    DG S Y+ I    + HL K G    E+GY
Sbjct: 270 SNPPYISQEEYEDLMPEVKKYEPKNALTDEGDGYSFYQKIIQQANSHLQKKGYLLFEVGY 329

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            Q   V    E      +   +DYGG+ RV+L
Sbjct: 330 QQAQQVKEWMEEENFEGIYIAEDYGGHQRVVL 361


>gi|257877102|ref|ZP_05656755.1| modification methylase HemK [Enterococcus casseliflavus EC20]
 gi|257811268|gb|EEV40088.1| modification methylase HemK [Enterococcus casseliflavus EC20]
          Length = 285

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+HE    +LG+ +FY  RL ++  T  PRPETE LV++ L     ++     +R++D+G
Sbjct: 65  LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLT----KLPADQPLRVVDIG 120

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164
           TGTGA+ +AL    P +    VD+S +AL +AK NA   G   RF   Q D    V +  
Sbjct: 121 TGTGAIAIALKLARPQWAVSAVDLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQ 178

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IVSNPPYI +     + + VR+ +P+++L     GL+ Y+ +A      L  +G  +
Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMA 238

Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           +EIG+ Q + V ++F +      V   KD  G DR++
Sbjct: 239 LEIGFQQGLAVQQLFAAAFPNKEVTVVKDLAGQDRMV 275


>gi|77360002|ref|YP_339577.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas haloplanktis TAC125]
 gi|76874913|emb|CAI86134.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas haloplanktis TAC125]
          Length = 279

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/237 (35%), Positives = 123/237 (51%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+S L   Q+        R L  E +  I+G R+F+++ L +++ T  PRP+TE LV+ A
Sbjct: 46  PESTLSTEQQQQFDTFCQRRLNGEPVAHIIGQREFWSLSLEVNATTLIPRPDTETLVEQA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  ++P   K     +LDLGTGTGA+ LAL  E P ++   VD    A+ +A  N     
Sbjct: 106 LEMAVPSNAK-----VLDLGTGTGAIALALGSEMPTWQITAVDRVADAVALATRNQQRLA 160

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++      QS+WFS++ G  F +IVSNPPYIE+  +     +VR F+P  +L    DGL+
Sbjct: 161 IN-NVQVKQSNWFSALNGEKFHLIVSNPPYIETTDIHLKQGDVR-FEPLSALVADDDGLA 218

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             + I      +L+  G   +E G+ Q   V + F       +   KD G NDRV L
Sbjct: 219 DIKQIITQSRDYLHAKGYLLIEHGFEQSGAVSQFFAQMGFINIKTVKDLGNNDRVTL 275


>gi|163803584|ref|ZP_02197451.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4]
 gi|159172626|gb|EDP57483.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4]
          Length = 285

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V G     ++  P+  L+  Q+    + + R +  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHVLGKPRTYLLTWPEKALEIEQQAQFDDLLARRIAGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + +
Sbjct: 89  KVSPSTLIPRPDTERLVEIALDKTYAQTGP-----ILDLGTGTGAIALALASEMPKRQVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
           GVD+  +A ++A  NA    + +     Q  WF  +     F +IVSNPPYI+       
Sbjct: 144 GVDLKQEAKDLAHYNASQLNI-KNVTFAQGCWFEPITSGTKFALIVSNPPYIDEQDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I  +  
Sbjct: 203 QGDVR-FEPKSALVADENGLADIRHISDLARQYLEAGGWLAFEHGYDQGDAVRTIMTNFG 261

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KDYGGNDRV L C
Sbjct: 262 YEQVVTEKDYGGNDRVTLGC 281


>gi|291535753|emb|CBL08865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis M50/1]
          Length = 281

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 120/220 (54%), Gaps = 8/220 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ +  +H  +  I+G  +F  ++  ++S+   PR +TE LV+ AL    P +      +
Sbjct: 60  ALRKRAEHVPLQYIVGEAEFMGLKFKVNSNVLIPRQDTETLVEEALKVVKPGM------K 113

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+ TG+G + ++++   P  +G   DIS +AL +AK NA  N VS  F+  +SD F +
Sbjct: 114 VLDMCTGSGCIIVSIVHNIPEVEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDN 171

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +DVIVSNPPYI +  V  L  EV++F+P  +LDG  DGL  YR I      +L   
Sbjct: 172 VTGTYDVIVSNPPYIRTGEVVKLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPG 231

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G    EIGY+Q   V  + +      V   KD   NDRV+
Sbjct: 232 GHILFEIGYDQGEAVSGLLKEAGFKNVTVIKDLAHNDRVV 271


>gi|237744128|ref|ZP_04574609.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|229431357|gb|EEO41569.1| methyltransferase [Fusobacterium sp. 7_1]
          Length = 370

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 128/222 (57%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R+ K + +  ILG  +FY +   ++     PR +TE+LV+  +   +  +E+ +   I
Sbjct: 131 VLRAKKRKPLQYILGEWEFYGLPFKVNEGVLIPRADTEILVEQCIQL-MREVEEPN---I 186

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+GA+ +A+  E       G+DI+ KA+E+A  N   N + E  + ++S+ F  +
Sbjct: 187 LDIGSGSGAISIAIANELKSSSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKL 245

Query: 162 EGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  F  D+IVSNPPYI       L  EV++++P+ +L    DGL  YR I+     +L  
Sbjct: 246 DKDFKYDLIVSNPPYISKEEYRTLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKD 305

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  + EIGYNQ  DV +I ++    +++  KDYGGN+RV++
Sbjct: 306 TGYLAYEIGYNQAKDVTKILQNNNFDVLSVIKDYGGNNRVVI 347


>gi|197284959|ref|YP_002150831.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Proteus mirabilis HI4320]
 gi|194682446|emb|CAR42348.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis HI4320]
          Length = 282

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 12/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT  +   +I   ++VL + ++  L++ + R +K E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTKRARTYLIAFSETVLLEDEQVQLSSLLARRIKGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFF 122
           L +S  T  PRP+TE LV+ AL       EK      RILDLGTGTGA+ LA+  E    
Sbjct: 82  LKVSPATLIPRPDTECLVEKAL-------EKLSAQASRILDLGTGTGAIALAIASERSDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + +GVD   +A+ +A  NA    +S   +  +S WFSS+ G  FD+I+SNPPYI+     
Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    I     + L  +G   +E G+ Q   V  IF  
Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
           +    V  F+DYGGN+RV
Sbjct: 253 KGYCCVETFRDYGGNERV 270


>gi|157829147|ref|YP_001495389.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933876|ref|YP_001650665.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. Iowa]
 gi|157801628|gb|ABV76881.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908963|gb|ABY73259.1| peptide release factor-glutamine N5-methyltransferase [Rickettsia
           rickettsii str. Iowa]
          Length = 524

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 132/262 (50%), Gaps = 21/262 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSALAFSL-----PRIEKRD---------------VVRILDLGTGTGAVCLALLKESPF 121
           VD            P  ++ D                + IL+LGTG+G + ++LL E P 
Sbjct: 103 VDVVFQCHSRESGNPEKKQPDPCFRGNDISKNCNDKFLNILELGTGSGCIAISLLCELPN 162

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              V  DIS  A++I KSNA    V++R   + S+WF ++E   FD IVSNPPYI     
Sbjct: 163 ANVVATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             + +E  +++P I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+  V +IF 
Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                + + +KD  G+ RV+L 
Sbjct: 283 DHGYNIESVYKDLQGHSRVILL 304


>gi|254787711|ref|YP_003075140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Teredinibacter turnerae T7901]
 gi|237685052|gb|ACR12316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Teredinibacter turnerae T7901]
          Length = 277

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 9/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G S   +   P+  L + ++        R    E +  ILG R+F+++  
Sbjct: 24  DTELLLAAVLGKSRTWLFTWPEYNLSEEEQARFAEFFARRRAGEPVAYILGEREFWSLPF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + + T  PRP+TELLV   +   +P+       R+LDLGTGTGA+ LAL  E      V
Sbjct: 84  FVDASTLIPRPDTELLVSCIVDLPIPK------QRVLDLGTGTGAIALALASELSDAVIV 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            VD S +A+++A  N    G +   + LQSDW+S++ +  FDVIV+NPPYI+        
Sbjct: 138 AVDKSPEAVKLALRNQARLGFT-NVEILQSDWYSALGDQHFDVIVANPPYIDEKDTHLGR 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+PR +L     GL+  R I      HLN  G   +E G+ Q   V  I   +  
Sbjct: 197 GDVR-FEPRSALVAADKGLADIRHIIVHAVEHLNDGGTLLIEHGWQQDERVAEILAGKGF 255

Query: 245 FLVNAFKDYGGNDRVLL 261
             +  F+D GGN+R  L
Sbjct: 256 LEIRTFQDLGGNNRATL 272


>gi|312897942|ref|ZP_07757355.1| protein-(glutamine-N5) methyltransferase [Megasphaera
           micronuciformis F0359]
 gi|310620976|gb|EFQ04523.1| protein-(glutamine-N5) methyltransferase [Megasphaera
           micronuciformis F0359]
          Length = 284

 Score =  131 bits (330), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 120/220 (54%), Gaps = 8/220 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R+ ++   H ILG + F  +   ++     PRPETELLV++ L        K   VR+LD
Sbjct: 68  RAARYPVAH-ILGIKPFMGLDFIVNEHVLVPRPETELLVEAVLEIC----PKEVPVRVLD 122

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+GA+ L+LL   P   G GVDIS  AL+IA  N+    + +R   + SD F++VE 
Sbjct: 123 MGTGSGAILLSLLSYLPQATGTGVDISSDALKIAAENSEALHI-DRAQWVNSDLFTNVEA 181

Query: 164 L-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D +VSNPPY+ +  +  L  EV+ +DP+ +L GG DGL  YR +A     +L   G 
Sbjct: 182 HEYDWLVSNPPYLTAPDMQNLEKEVK-YDPKTALYGGTDGLDIYRRLASEGGAYLKVGGH 240

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           C VE+G  Q   V  +F  +   LV    DY   +R +L 
Sbjct: 241 CIVEVGAGQARQVAELFTEQDFELVRIINDYADTERHVLL 280


>gi|261340149|ref|ZP_05968007.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317664|gb|EFC56602.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
           ATCC 35316]
          Length = 276

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q   L+  + R    E +  ++G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKTRTWLLAFGETALTAEQEAALSALLARRKTGEPVAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S+ T  PRP+TE LV+ ALA    R+ ++    ILDLGTGTGA+ LAL  E P    
Sbjct: 82  LYVSAATLIPRPDTECLVEQALA----RLPEQSTA-ILDLGTGTGAIALALASERPDCSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A+ N    G+      LQS WFS++E   F +IVSNPPYI+       
Sbjct: 137 TAVDLMPDAVALAQRNVQRLGLC-NVTVLQSRWFSALEARSFGMIVSNPPYIDENDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +GL+    I     +HL   G   VE G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPRTALVASGEGLADLDHIVTTSRQHLLHGGWLLVEHGWTQGEAVRDLFTRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YTGVETCRDYGGNERLTL 272


>gi|290969300|ref|ZP_06560825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290780806|gb|EFD93409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 290

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 7/217 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++  I G + F+     +S +   PRPETELLV+    + +   ++R+ +RILD+GTG+G
Sbjct: 73  AVAHITGVKAFFGSDFLVSPEVLIPRPETELLVE----YVIHACKQRESLRILDIGTGSG 128

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168
           A+ L+LL   P   G GVDIS  AL+IA+ N++  G+  R    +SD    V+G  F VI
Sbjct: 129 AILLSLLAHLPQAVGWGVDISRAALQIAEKNSIVQGLETRAVWRESDLCQQVQGERFSVI 188

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPY+ +  +  L  E+R  +P  +L GG DGL  YR +A      L   GLC+VEIG
Sbjct: 189 VSNPPYLTAADMAQLQPEIRR-EPETALFGGQDGLDIYRRLAVETVPLLEPGGLCAVEIG 247

Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
             Q+  V R+F +   + L +   DYG   R L+F +
Sbjct: 248 RGQEEAVQRLFTADGDYTLQDCVWDYGRILRHLVFKK 284


>gi|237731779|ref|ZP_04562260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
 gi|226907318|gb|EEH93236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
          Length = 277

 Score =  131 bits (330), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L + QR  L   + R  + E +  + G R+F+++ 
Sbjct: 22  RDAEILLEFVTGKGRTFILAFGETELTEAQRQQLDTLLERRQRGEPVAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----ASACRILDLGTGTGAIALALATERPDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  N    G++     LQS+WFS+++G  FD+IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAIRNKQQLGINN-VCVLQSNWFSALQGQQFDMIVSNPPYIDEQDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I D   R L   G   +E G+ Q   V   F    
Sbjct: 196 QGDVR-FEPLSALVAGDQGLADIVHIIDQSLRMLTPGGYLLLEHGWQQGEAVRDAFTRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YLAVETCRDYGGNERITL 272


>gi|118602770|ref|YP_903985.1| HemK family modification methylase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567709|gb|ABL02514.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 261

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 14/207 (6%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G + FY++   ++  T  PRPETELL+D AL       +K    ++LDLGTG+G + + L
Sbjct: 64  GTKGFYHLDFKVTPSTLIPRPETELLIDIALGL----FDKNQTCKVLDLGTGSGIIIITL 119

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
             ++P +     D S  AL+IA+ NA TN      +     WF +    +FD+I+SNPPY
Sbjct: 120 GDKNPQWHLTATDSSINALDIAQQNAKTN-----INFQLGSWFKATPNQIFDLIISNPPY 174

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I+        L    F+P+ +L  G DGL   RTI +   +HLNK G   +E G++Q+ +
Sbjct: 175 IKQSDPHLNDLS---FEPQSALVSGKDGLDDIRTIINNAPQHLNKKGYILLEHGFDQQQE 231

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           ++++  S   F +  FKDY   DR LL
Sbjct: 232 IIQLL-SNNFFNIQKFKDYNQQDRALL 257


>gi|52425246|ref|YP_088383.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307298|gb|AAU37798.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
          Length = 340

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 146/273 (53%), Gaps = 17/273 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +I   D++L + +   L+  +VR  + E I  ILG +DF+++ L
Sbjct: 66  DANRLLQFVTQKSKGTIIAFSDTLLTENESALLSQYLVRRCEGEPIAYILGEQDFWSLNL 125

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALL------ 116
            +S DT  PRP+TE+LV+ AL F+  R+        + ILDLGTGTGA+ LAL       
Sbjct: 126 EVSPDTLIPRPDTEILVEKALEFAKFRLNSPHFSGELAILDLGTGTGAIALALAAELAPI 185

Query: 117 --KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
             K     + +GVD++  A+E+AK NA+ N + +  + LQS+WF  +E   FD+IV NPP
Sbjct: 186 SQKCGAKLRILGVDLTNGAVELAKRNALRNQLPQ-VEFLQSNWFEQLENRQFDIIVGNPP 244

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI+         +VR F+P  +L     G +  R I +    HL   G   +E G+ Q  
Sbjct: 245 YIDRQDEHLALGDVR-FEPLTALVAEDSGYADLRHIIERAPFHLKHQGWLILEHGWQQGQ 303

Query: 234 DVVRIFE--SRKLF-LVNAFKDYGGNDRVLLFC 263
            V  IF   S+  +  V   KDYG N+R+ L C
Sbjct: 304 KVRSIFNEFSQNYWQQVATMKDYGDNERITLGC 336


>gi|283785499|ref|YP_003365364.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Citrobacter rodentium ICC168]
 gi|282948953|emb|CBG88556.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Citrobacter rodentium ICC168]
          Length = 278

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L D Q+  L   + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEFVTGKTRTWILAFGETALTDTQQQQLATLLARRRRGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----ASPCRILDLGTGTGAIALALATERPDCVI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    +      LQSDWFS+V+G  FD+IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAAHLAIGN-VRILQSDWFSAVKGEQFDMIVSNPPYIDEQDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  G++    I       L+  G   +E G+ Q   V   F    
Sbjct: 196 EGDVR-FEPLSALVAGDHGMADIVQIIAQARDFLSAGGFLLLEHGWQQGAAVREAFSRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YQAVATCRDYGDNERITL 272


>gi|119775697|ref|YP_928437.1| hemK family protein [Shewanella amazonensis SB2B]
 gi|119768197|gb|ABM00768.1| hemK family protein [Shewanella amazonensis SB2B]
          Length = 285

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 125/237 (52%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       I R  K   +  ILG R+F++++  ++  T  PRP+TE+LV++A
Sbjct: 48  PERPLTSEQWKHFEQLINRRAKGVPVAHILGEREFWSLKFLVNETTLIPRPDTEMLVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP     D  R+LD+GTGTGA+ LAL  E P ++   +D    A+ +AK+N    G
Sbjct: 108 LNLPLP-----DNARVLDMGTGTGAIALALASERPNWRITALDKVDDAVALAKANREQLG 162

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S+  + LQSDWFS+V +  FD+IVSNPPYI+         +VR F+P  +L    +G +
Sbjct: 163 LSQ-VEILQSDWFSAVRDADFDLIVSNPPYIDEHDEHLAMGDVR-FEPLSALTAADEGYA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA     HL   G   +E G+ Q + +     S     V   +D+G NDR  L
Sbjct: 221 DLNHIAMHAREHLKVGGYLLLEHGFAQALKLRETLVSLGYDKVATVRDFGSNDRCTL 277


>gi|331090677|ref|ZP_08339526.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400091|gb|EGG79742.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 274

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 134/255 (52%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +T +S      +P   +   Q+      +    K   +  +   ++F  +  
Sbjct: 25  DAWILLEYITKISRAMYYANPKREMTGEQKTQYKYFVEERAKRIPLQHLTKEQEFMGLSF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE+LV++ L       +  + +R+LD+ TG+G + ++LLK     KGV
Sbjct: 85  EVNEHVLIPRQDTEVLVETVLE------DLEENMRVLDICTGSGCILISLLKIMRGVKGV 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS +ALE+A+ NA  + +   F  +QSD F +VEG +DVIVSNPPYI++  ++ L  
Sbjct: 139 GVDISEEALEVARRNAQKHDMEAVF--IQSDLFENVEGTYDVIVSNPPYIKTEEIEKLEE 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV+  DP ++LDG  DGL  YR I     ++L ++G    EIG  Q  +V  + E     
Sbjct: 197 EVKLHDPMLALDGKEDGLYFYRKIIKESRKYLKRNGKLYFEIGNTQGEEVKTLMEEEGFT 256

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  G DRV+
Sbjct: 257 NVKIKKDLAGLDRVV 271


>gi|89070965|ref|ZP_01158191.1| modification methylase, HemK family protein [Oceanicola granulosus
           HTCC2516]
 gi|89043472|gb|EAR49686.1| modification methylase, HemK family protein [Oceanicola granulosus
           HTCC2516]
          Length = 289

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 119/255 (46%), Gaps = 21/255 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
            ++ P+ V  D    +    I R   HE +  + G R FY     ++ D  +PRPETE L
Sbjct: 43  TLILPEPVPADALAIY-RQLITRRAAHEPVSHLTGRRMFYGREFLVTPDVLDPRPETETL 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEI 136
           +++ALA            ++LDLG G+G + L LL E      P   G GV++S  A E+
Sbjct: 102 IEAALA--------EPFAQVLDLGMGSGCILLTLLAEMEAMGHPEVWGAGVELSPAAFEV 153

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFD-------VIVSNPPYIESVIVDCLGLEVRD 189
           A  N     + ER   LQ  W++ +   F        +IVSNPPY+       L   VR+
Sbjct: 154 AWWNRNAFRLEERALLLQGSWYAPLAAEFGADMPGFALIVSNPPYVTEDEWQALDATVRE 213

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +PRI+L  G DGL+ YR I      HL   G   VEIG  Q + V  +     L  V  
Sbjct: 214 HEPRIALTDGADGLTAYREIVASAPAHLAPRGRLMVEIGPAQGMAVAALMLEAGLSDVRI 273

Query: 250 FKDYGGNDRVLLFCR 264
            +D  G DRV+L  R
Sbjct: 274 VQDLDGRDRVVLGRR 288


>gi|257867024|ref|ZP_05646677.1| modification methylase HemK [Enterococcus casseliflavus EC30]
 gi|257873359|ref|ZP_05653012.1| modification methylase HemK [Enterococcus casseliflavus EC10]
 gi|257801080|gb|EEV30010.1| modification methylase HemK [Enterococcus casseliflavus EC30]
 gi|257807523|gb|EEV36345.1| modification methylase HemK [Enterococcus casseliflavus EC10]
          Length = 285

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 8/217 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+HE    +LG+ +FY  RL ++  T  PRPETE LV++ L     ++     +R++D+G
Sbjct: 65  LQHEPPQYLLGYEEFYGHRLKVTPATLIPRPETEELVENCLT----KLPADQPLRVVDIG 120

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164
           TGTGA+ +AL    P +    VD+S +AL +AK NA   G   RF   Q D    V +  
Sbjct: 121 TGTGAIAIALKLARPQWAVSAVDLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQ 178

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IVSNPPYI +     + + VR+ +P+++L     GL+ Y+ +A      L  +G  +
Sbjct: 179 WDLIVSNPPYISAEEWPLMDISVREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMA 238

Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           +EIG+ Q + V ++F +      V   KD  G DR++
Sbjct: 239 LEIGFQQGLVVQQLFAAAFPNKEVTVVKDLAGQDRMV 275


>gi|330813116|ref|YP_004357355.1| methylase of polypeptide chain release factors [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486211|gb|AEA80616.1| methylase of polypeptide chain release factors [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 284

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 134/258 (51%), Gaps = 6/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  V       +    + +L+  Q   ++  I R    E +  IL  +DF+N   
Sbjct: 26  DSEIILASVLKTDRINLSTQHNLILNKSQELLMSQLIERRKNKEPVAYILNKKDFWNETY 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +      PRPETE+L++      L +I+ K  V+++LD+G G+G + ++ L+E     G
Sbjct: 86  FVDQRALIPRPETEILIE----MVLKKIKDKSKVLQLLDIGCGSGCLLISCLRELKKSIG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
           +G+DIS  AL ++K N     +++R +  +   F  +    FDVI+SNPPY+ S   D L
Sbjct: 142 IGLDISSDALAVSKINVKNYKLNKRVELHKESIFHFLTLKKFDVILSNPPYLSSAEYDNL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            ++V++F+P+ +L GG DG SHY+ I    S  L K+GL ++E+G  Q   +  I     
Sbjct: 202 EIDVKNFEPKTALKGGHDGTSHYKKIITFASMSLKKNGLLALELGDQQFFKIKEILAENS 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
             +++ ++   G  R +L
Sbjct: 262 FRVLDKYRLINGEIRCIL 279


>gi|91776826|ref|YP_546582.1| HemK family modification methylase [Methylobacillus flagellatus KT]
 gi|91710813|gb|ABE50741.1| [protein release factor]-glutamine N5-methyltransferase
           [Methylobacillus flagellatus KT]
          Length = 284

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 123/241 (51%), Gaps = 7/241 (2%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I   D  + D  R    + + R ++ E +  ILG R+FY     ++ DT  PR +TE L
Sbjct: 46  LIAHGDEAVTDALRARFESLLARRIEGEPVAHILGRREFYGRDFIVTPDTLIPRSDTETL 105

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++A    L RI       ILD+GTGTGA+ + L  E P  K   VD S  AL IA+ NA
Sbjct: 106 VEAA----LDRIPVGQTCEILDMGTGTGAIGITLALERPQAKVTIVDYSEAALAIARENA 161

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                +     L+SDWFS++ G  FD+IVSNPPYIE+        ++R F+P  +L  G 
Sbjct: 162 -RQLSAHNVTALRSDWFSALGGRCFDLIVSNPPYIEAADPHLQQGDLR-FEPIAALASGA 219

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL   R ++   + HL  +G   +E GY Q   V  + +      +    D  G++RV 
Sbjct: 220 DGLDDIRILSAQAADHLITNGWLMLEHGYQQGAAVRSLLQQHGFANIGTATDLAGHERVT 279

Query: 261 L 261
           L
Sbjct: 280 L 280


>gi|315649891|ref|ZP_07902973.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus vortex V453]
 gi|315274690|gb|EFU38072.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus vortex V453]
          Length = 296

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 134/270 (49%), Gaps = 10/270 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+  R++   L  V GLS     +          R  L  AI R  +      I+G ++F
Sbjct: 31  MEPQRNAQLLLEHVLGLSGSSYYMALPEPFPAECRHALEEAIRRKAEGVPAQYIIGEQEF 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFS---LPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y     ++     PRPETELLV++ L +     PR E R  ++ +D+GTG+GA+ + L  
Sbjct: 91  YGRPFEVTPAVLIPRPETELLVEAVLKYGQELAPRSEAR--LKAIDIGTGSGAIAVTLAL 148

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIE 176
           ++P ++ +  DIS +ALE+A  NA     +  F   Q +      GL  D++VSNPPYI 
Sbjct: 149 QAPSWELLASDISPEALEVATRNAKQLHANVEFR--QGNLLEPFAGLAPDILVSNPPYIP 206

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  ++ L  EVRD++PR +LDGG DGL+ YR +   +        L + E+G  Q  DV 
Sbjct: 207 AEDIEGLQPEVRDYEPRTALDGGRDGLNPYRIMMAQLPLLSAPPRLIAFELGMGQAGDVA 266

Query: 237 RIFESRKLFL-VNAFKDYGGNDR-VLLFCR 264
            +      +  +    D  G DR VL  CR
Sbjct: 267 ELLRQAGHWQEIVTVPDLAGIDRHVLGICR 296


>gi|293395775|ref|ZP_06640057.1| protein methyltransferase HemK [Serratia odorifera DSM 4582]
 gi|291421712|gb|EFE94959.1| protein methyltransferase HemK [Serratia odorifera DSM 4582]
          Length = 276

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 14/263 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG +   ++   +++L  ++   L   ++R  + E +  ++G R+F++
Sbjct: 20  AKRDAEILLGFVTGRARTFLLAFGETLLTTQESAQLEQLLMRRERGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLP--RIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + L++S  T  PRP+TE LV+ ALA  LP  R E      ILDLGTGTGA+ LAL  E  
Sbjct: 80  LPLSVSPATLIPRPDTECLVEQALA-RLPAHRCE------ILDLGTGTGAIALALASERA 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                GVD+  +A+ +A+ NA    +   +F   Q DWF+ V G  FD+I SNPPYI+  
Sbjct: 133 DCMVTGVDLQPQAVALAQHNAQKLAIGNVQFH--QGDWFTPVAGRRFDLIASNPPYIDGD 190

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V     +VR F+P  +L     GL+  R I     R+L   G   +E G+ Q   V  +
Sbjct: 191 DVHLSQGDVR-FEPGSALVAQEHGLADLRAIVQQAPRYLQPQGWLLLEHGWQQAESVRAM 249

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
             +     + + +DYGGN RV L
Sbjct: 250 LAAAGFSAIESCRDYGGNLRVTL 272


>gi|212711978|ref|ZP_03320106.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
           30120]
 gi|212685500|gb|EEB45028.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
           30120]
          Length = 277

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 135/260 (51%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L   TG S   ++   ++ L   ++  L   ++R  + E I  I+G R+F++
Sbjct: 20  AKRDAQILLQYTTGRSRTYILAFDETELTSDEQTQLDALLMRREQGEPIAYIVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL   LP  E     RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSPATLIPRPDTECLVEQALV-RLPNAE----CRILDLGTGTGAIGLALASELPNS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
             VGVD + +A+ +A+ N     +       QSDWF+S+   LFD+IVSNPPYI+   + 
Sbjct: 135 CVVGVDFNPEAVALAQRNQQRLALP-NIQFSQSDWFASLPNELFDMIVSNPPYIDEGDIH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G S    I     ++L + G   +E G+ Q   V ++F  
Sbjct: 194 LSQGDVR-FEPSTALIADNHGFSDLEHIIATSKQYLKQQGWLLLEHGWQQGSTVRKLFNE 252

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V    DYGG +RV L
Sbjct: 253 NGYTNVETCLDYGGKERVSL 272


>gi|167471071|ref|ZP_02335775.1| methyltransferase, HemK family protein [Yersinia pestis FV-1]
          Length = 267

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F+++ 
Sbjct: 13  RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 72

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E      
Sbjct: 73  LSVSSATLIPRPDTECLVEQALA-RLPAMP----CRILDLGTGTGAIALALATERRDCAV 127

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++       
Sbjct: 128 IAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 186

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L+  G   +E G+ Q   V  + ++   
Sbjct: 187 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNSGF 245

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   KDYG NDRV L
Sbjct: 246 SAVMTCKDYGNNDRVTL 262


>gi|22126174|ref|NP_669597.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis KIM 10]
 gi|45441670|ref|NP_993209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|108807398|ref|YP_651314.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Antiqua]
 gi|108811663|ref|YP_647430.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|145598395|ref|YP_001162471.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides F]
 gi|149366050|ref|ZP_01888085.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162418925|ref|YP_001606877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Angola]
 gi|165926407|ref|ZP_02222239.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938832|ref|ZP_02227386.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009186|ref|ZP_02230084.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211074|ref|ZP_02237109.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401386|ref|ZP_02306883.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419945|ref|ZP_02311698.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424706|ref|ZP_02316459.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|218929129|ref|YP_002347004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis CO92]
 gi|229894729|ref|ZP_04509909.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Pestoides A]
 gi|229897429|ref|ZP_04512585.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898072|ref|ZP_04513223.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229901941|ref|ZP_04517062.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Nepal516]
 gi|270490876|ref|ZP_06207950.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pestis KIM D27]
 gi|294503911|ref|YP_003567973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Z176003]
 gi|21959138|gb|AAM85848.1|AE013831_11 possible protoporphyrinogen oxidase [Yersinia pestis KIM 10]
 gi|45436532|gb|AAS62086.1| putative protoporphyrinogen oxidase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108775311|gb|ABG17830.1| protoporphyrinogen oxidase [Yersinia pestis Nepal516]
 gi|108779311|gb|ABG13369.1| putative protoporphyrinogen oxidase [Yersinia pestis Antiqua]
 gi|115347740|emb|CAL20655.1| putative protoporphyrinogen oxidase [Yersinia pestis CO92]
 gi|145210091|gb|ABP39498.1| protoporphyrinogen oxidase [Yersinia pestis Pestoides F]
 gi|149292463|gb|EDM42537.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162351740|gb|ABX85688.1| methyltransferase, HemK family [Yersinia pestis Angola]
 gi|165913195|gb|EDR31818.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921628|gb|EDR38825.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991741|gb|EDR44042.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208254|gb|EDR52734.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961640|gb|EDR57661.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049082|gb|EDR60490.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056588|gb|EDR66357.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229680837|gb|EEO76932.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Nepal516]
 gi|229689113|gb|EEO81178.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229693766|gb|EEO83815.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702202|gb|EEO90221.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Pestoides A]
 gi|262361968|gb|ACY58689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis D106004]
 gi|262365893|gb|ACY62450.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis D182038]
 gi|270339380|gb|EFA50157.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pestis KIM D27]
 gi|294354370|gb|ADE64711.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Z176003]
 gi|320015304|gb|ADV98875.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 276

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E      
Sbjct: 82  LSVSSATLIPRPDTECLVEQALA-RLPAMP----CRILDLGTGTGAIALALATERRDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++       
Sbjct: 137 IAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L+  G   +E G+ Q   V  + ++   
Sbjct: 196 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNSGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   KDYG NDRV L
Sbjct: 255 SAVMTCKDYGNNDRVTL 271


>gi|33152003|ref|NP_873356.1| protein-glutamine N-methyl transferase [Haemophilus ducreyi
           35000HP]
 gi|33148225|gb|AAP95745.1| Protein-glutamine N-methyl transferase [Haemophilus ducreyi
           35000HP]
          Length = 290

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 6/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D++  L  VT  S   +    ++ L   Q   LT  + R  K E I  ILG ++F+++ L
Sbjct: 29  DANLLLQAVTKKSKAMLFAFGETHLSHDQLAELTLLLQRRQKGEPIAYILGEKEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE +V+ AL ++  R+E++  + ILDLGTGTGA+ LAL  E    K V
Sbjct: 89  KVSKHTLIPRPDTERVVEIALDWAYKRLEQQTNLHILDLGTGTGAIALALASELG-DKAV 147

Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              VDI  +A+ +A+ N    G  ++   LQSDWF++++   FD+IVSNPPYI+    + 
Sbjct: 148 ITAVDIKAEAVSLAEENRQHLGF-KQVTFLQSDWFNALQSQQFDLIVSNPPYIDKTDENL 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GLS    I +    +L   G   +E G+ Q   V + F+  
Sbjct: 207 KLGDVR-FEPLSALVSAQQGLSDLYKIIENAPLYLTAKGALILEHGWQQATAVQQFFQHY 265

Query: 243 KLFLVNAFKDYGGNDRV 259
               + +++DY G DRV
Sbjct: 266 DWDEIQSWQDYAGLDRV 282


>gi|262041833|ref|ZP_06015018.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040825|gb|EEW41911.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 283

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F+++ 
Sbjct: 23  RDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRHRGEPIAHLVGQREFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 83  LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA   G++      QSDWFS+++G  F  IVSNPPYI++      
Sbjct: 138 TAVDVMPDAVALALRNAEHLGIAN-VTISQSDWFSALDGQRFATIVSNPPYIDAADPHLA 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 256 YLDVATCRDYGDNERLTL 273


>gi|237807597|ref|YP_002892037.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
 gi|237499858|gb|ACQ92451.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
          Length = 282

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V   +   +   P+  L   Q   +    VR  + E +  ILG R+F++
Sbjct: 20  AALDADCLLCAVLSCTRTYLRTWPEQELTPEQVAQVEQFAVRREQGEPVAYILGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL       E+    + LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLQVSPATLIPRPDTEALVEWALTL---LSEQGQGQKALDLGTGTGAIALALKSEFPAL 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               ++    AL++A+ NA   G S  F  L S+WFS++ E  F +IVSNPPYI++    
Sbjct: 137 AMWALEREPAALDLARRNAARLGFSVNF--LASNWFSALNERNFQLIVSNPPYIDAADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    DGL+  R I D    +L   G   +E G+ Q   V  +  S
Sbjct: 195 LAQGDVR-FEPHSALVADEDGLADIRQIIDQAPEYLAAGGWLLLEHGWQQAEAVRDLLSS 253

Query: 242 RKLFLVNAFKDYGGNDRV 259
           R    V    D GG DRV
Sbjct: 254 RGFQAVTTKSDLGGQDRV 271


>gi|262274707|ref|ZP_06052518.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP
           101886]
 gi|262221270|gb|EEY72584.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP
           101886]
          Length = 281

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 128/257 (49%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V    S  +    D  L + +       + R    E +  I+G+RDF+++RL
Sbjct: 27  DASVLLCHVLDKPSSYLYTWSDKALTEDEEAAFNTLLARRKTGEPVAYIIGYRDFWSLRL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +   T  PRP+TE LV+ AL     R+ + D   +LDLGTGTGA+ LA+  E       
Sbjct: 87  NVEPSTLIPRPDTERLVELALE----RLPQGDGA-VLDLGTGTGAIALAIASERKDIAVT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
           GVD+  +A+ +A  N + NG++     +QS WFS+V    F +IVSNPPYI+        
Sbjct: 142 GVDLRAEAVALAMKNGLENGINNA-QFMQSSWFSNVPAQRFSMIVSNPPYIDPEDPHLSQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G  GL+  R I      +L   G   +E GY+Q   V  +F     
Sbjct: 201 GDVR-FEPKSALVSGEHGLADIRVICQQSPEYLVDGGWLLIEHGYDQGEAVRTLFCGAGF 259

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    DY G DRV L
Sbjct: 260 IDVETQHDYAGLDRVTL 276


>gi|283856489|ref|YP_163245.2| Modification methylase HemK family protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|283775493|gb|AAV90134.2| Modification methylase HemK family protein [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 286

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 137/253 (54%), Gaps = 10/253 (3%)

Query: 17  LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           L +H + ++ D++L     +         AI R  ++E +  ILG+RDF+ +RLT++ D 
Sbjct: 39  LMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQNEPVAYILGYRDFWTLRLTVTPDV 98

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRP++E L+++A+A+   R +      ILDLGTG+GA+ LA L E    KG+GVD S 
Sbjct: 99  LIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAALDEWKDAKGLGVDASP 156

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A++IA+ NA   G   R +     W   ++  FD+++ NPPYI    +  +  +V  ++
Sbjct: 157 EAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIARDAM--MPADVLHYE 214

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++L  G +GL  YR I  G+   L + G+  +EIG++Q  +V  I +   L     F 
Sbjct: 215 PHLALFSGDEGLDDYREIIPGIPSLLTERGIACLEIGFDQAENVSMIAKETGL-RSRIFY 273

Query: 252 DYGGNDRVLLFCR 264
           D     R +L  R
Sbjct: 274 DLEQRPRCVLLSR 286


>gi|330009866|ref|ZP_08306622.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3]
 gi|328534692|gb|EGF61257.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 133/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F+++ 
Sbjct: 23  RDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRQRGEPIAHLVGQREFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 83  LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA   G++      QSDWFS ++G  F  IVSNPPYI++      
Sbjct: 138 TAVDVMPDAVALALRNAEHLGIAN-VTISQSDWFSELDGQRFATIVSNPPYIDAADPHLA 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 256 YLDVATCRDYGDNERLTL 273


>gi|153868970|ref|ZP_01998684.1| hemK protein [Beggiatoa sp. PS]
 gi|152074464|gb|EDN71316.1| hemK protein [Beggiatoa sp. PS]
          Length = 280

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 136/256 (53%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC +  ++   ++  P+ +L + Q       + R ++   I  ++G + F++  L
Sbjct: 25  DAEILLCHILNVTRSYLLAWPEKILTENQYAQFQALLTRRVQGVPIAYLIGSKAFWSFDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +T  PRPETELLV+  LA    R+      +++DLGTG+GA+ LA+ KE P+ + +
Sbjct: 85  QVTKNTLIPRPETELLVEQVLA----RLPPDSDAQVIDLGTGSGAIALAIAKERPYCRLL 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC-L 183
             D + +AL++A++NA   G       L SDW+S++  +   ++VSNPPY+     DC L
Sbjct: 141 ATDNATEALQVAQANAQHLGF-HPIKFLLSDWWSALGDIKATIVVSNPPYVAE--NDCHL 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                  +PR +L  G+DGL+  R +      HL  +G   +E GY+Q   V ++FE + 
Sbjct: 198 TQGDVHHEPRNALVAGVDGLTDIRALVKESLSHLEINGWLLLEHGYDQGEAVQQLFEQQG 257

Query: 244 LFLVNAFKDYGGNDRV 259
              +  + D  G  RV
Sbjct: 258 YQAIETYYDLAGLPRV 273


>gi|297182636|gb|ADI18794.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF4000_37C10]
          Length = 279

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 9/226 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
             +AI R +  E +  I+G ++F++    ++  T  PRPETELL+   + F      K  
Sbjct: 57  FNHAIKRRINREPVAYIIGKKEFWSQDFAVNHATLVPRPETELLIYKVVDFF-----KNK 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQS 155
            + ILD+GTG+G + L++LKE  F +GVG+DIS KA++ A+ N+    +    +F     
Sbjct: 112 RINILDIGTGSGCILLSILKELDFSRGVGIDISTKAIKTAQINSKNLNLFHQSKFKVFDI 171

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             F+   G +D+IVSNPPYI S  +  L  ++ +++P ++L+GG+DGL   R +    + 
Sbjct: 172 SKFNV--GKYDLIVSNPPYIPSKDIKNLSKDIINYEPLVALNGGLDGLDLIRKVIYKSNS 229

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            L ++GL ++EIG+NQ + V  + +      ++   DY  N R ++
Sbjct: 230 LLKRNGLLAIEIGFNQYLKVSSLLKQYGFREMSRQCDYNHNVRCII 275


>gi|308186586|ref|YP_003930717.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
 gi|308057096|gb|ADO09268.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
          Length = 277

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   ++ L D Q   L + + R  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRSWLIAFDETALSDAQLAQLDSLLARRARGEPVAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TELLV+ ALA  LP         ILD+GTGTGA+ LAL  E P  + 
Sbjct: 82  LRVSDATLIPRPDTELLVEQALAH-LPATPS----TILDMGTGTGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
            GVD    A+E+A SNA    +S     L S WF ++    F +IVSNPPYI++      
Sbjct: 137 TGVDRIEAAVELAGSNAEQLNLSNT-TFLLSHWFQALTPQHFTLIVSNPPYIDASDTHLE 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L     GL+  RT+ +     L   G   +E G+ Q   V  + ++  
Sbjct: 196 QGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMQNNG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN RV L
Sbjct: 255 YHAVETVRDYGGNPRVTL 272


>gi|167759399|ref|ZP_02431526.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704]
 gi|167662956|gb|EDS07086.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704]
          Length = 283

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 132/275 (48%), Gaps = 40/275 (14%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L   TG+S      DPD                + +K E   R LG+ +  
Sbjct: 26  EAALDAWYLLEFATGISKASYYGDPD----------------KEIKEEEAARYLGYIEIR 69

Query: 62  NVRLTLSSDTFE----------------PRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
             R+ L   T E                PR +TE LV+ AL    P ++      +LDL 
Sbjct: 70  KSRIPLQHITKEQAFMGYPFYVDEHVLIPRQDTETLVEEALKVLKPGMQ------VLDLC 123

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+G + ++L+K      G G DIS  ALE+A+ NA    V+  F  ++S  F  + G +
Sbjct: 124 TGSGCILISLMKMCKGLYGTGSDISEDALEVARKNACRLEVNAAF--IRSSLFEHISGRY 181

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI + +++ L  EVR +DP I+LDG  DGL  YR I     R+L  +G    
Sbjct: 182 DLIVSNPPYIPTSVIEGLQEEVRLYDPFIALDGKEDGLYFYREIIKAGIRYLRPEGYLMF 241

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           EIGY+Q  +V  + E +    +   KD  G DRV+
Sbjct: 242 EIGYDQGNEVACLMEKQGYRNILVKKDLAGLDRVV 276


>gi|227355361|ref|ZP_03839762.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis ATCC 29906]
 gi|227164585|gb|EEI49456.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis ATCC 29906]
          Length = 282

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 136/258 (52%), Gaps = 12/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT  +   +I   ++VL + +   L++ + R +K E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTKRARTYLIAFSETVLLEDELVQLSSLLARRIKGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFF 122
           L +S  T  PRP+TE LV+ AL       EK      RILDLGTGTGA+ LA+  E    
Sbjct: 82  LKVSPATLIPRPDTECLVEKAL-------EKLSAQASRILDLGTGTGAIALAIASERSDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + +GVD   +A+ +A  NA    +S   +  +S WFSS+ G  FD+I+SNPPYI+     
Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    I     + L  +G   +E G+ Q   V  IF  
Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
           +    V  F+DYGGN+RV
Sbjct: 253 KGYCCVETFRDYGGNERV 270


>gi|154482490|ref|ZP_02024938.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC
           27560]
 gi|149736691|gb|EDM52577.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC
           27560]
          Length = 237

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 5/210 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I G ++F  +   ++ D   PR +TELLV++A+ +   +  K DV  +LD+ TG+G 
Sbjct: 28  LQHITGSQEFMGLDFKVNEDVLIPRQDTELLVENAITYI--KSVKGDV-DVLDMCTGSGC 84

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++ +     K   VD S KAL +AK N   N     F   QSD F +VE  +DVIVS
Sbjct: 85  IAISIDRLCENAKVTAVDFSEKALVVAKENNALNKADVTF--FQSDLFENVEKQYDVIVS 142

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI++  ++ L  EVR  +P ++LDG  DGL  Y+ IA    ++L  +G+   EIGY+
Sbjct: 143 NPPYIKTEEIESLMDEVRIHEPMMALDGDCDGLKFYKKIAKEGRQYLRSNGIIFFEIGYD 202

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V  I E      +  +KD  GNDRV+
Sbjct: 203 QGQTVPAILEENGYKDIKVYKDLSGNDRVV 232


>gi|323496830|ref|ZP_08101867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
 gi|323318089|gb|EGA71063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
          Length = 286

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 133/258 (51%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC   G     ++  PD  L   Q       + R +K E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHSLGKPRSFLLTWPDKELTTEQIERFEQLLSRRIKGEPVAYIIGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +++  T  PRP+TE LV+ AL  +   + + D   ILDLGTGTGA+ LAL  E P  K  
Sbjct: 89  SVAPSTLIPRPDTERLVEVALDKA--NLNQGD---ILDLGTGTGAIALALASELPERKVW 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
           G+D+   A ++A SNA   G++   +     WF  V+    F +IVSNPPYIE       
Sbjct: 144 GIDLKIDAQQLASSNADKLGIT-NCEFRAGSWFDPVDAGTQFALIVSNPPYIEENDPHLT 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  + I++   R+L   G    E GY+Q   V  I  S  
Sbjct: 203 QGDVR-FEPLSALVAEDNGLADIKHISEHARRYLLAGGWLMFEHGYDQGKAVRDILTSLG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
            + V  +KDYG NDRV +
Sbjct: 262 YYQVETYKDYGNNDRVTI 279


>gi|116511388|ref|YP_808604.1| methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116107042|gb|ABJ72182.1| Methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. cremoris SK11]
          Length = 271

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 123/236 (52%), Gaps = 12/236 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D++   LT    R +K+E    I+GW +FY ++  +      PRPETE LV+  L  +  
Sbjct: 45  DQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILTEN-- 102

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D ++ILD+GTG+GA+ ++L K    +     DIS  ALE+A  NA  N V+  F 
Sbjct: 103 ---NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHVNLEF- 158

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+ IAD
Sbjct: 159 -IQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQKIAD 217

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLLFCR 264
               HL  DG   +EIGY Q   V  IF+ +  F   LV+  +D  G DR++   R
Sbjct: 218 QAVNHLTDDGKIYLEIGYKQGKAVQAIFQEK--FTDRLVSIHQDIFGKDRMISVKR 271


>gi|317499019|ref|ZP_07957300.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893669|gb|EFV15870.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 283

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 10/241 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D + D          I +  +H  +  ILG ++F      ++ D   PR +TE +++  L
Sbjct: 47  DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
              +P+  K   ++ILDL TG+G  A+ LAL+ +      VG DIS KAL+IAK+N    
Sbjct: 107 -LKVPQTLKN--LKILDLCTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               +F  +QSD F +V G +D+I+SNPPYI +     L  EV+D++P ++LDG  DGL 
Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263
            Y+ I      +LN  G+ + EIGY+Q   V  + E++    V   KD  G DR++  F 
Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279

Query: 264 R 264
           R
Sbjct: 280 R 280


>gi|167629002|ref|YP_001679501.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1]
 gi|167591742|gb|ABZ83490.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1]
          Length = 297

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 127/236 (53%), Gaps = 10/236 (4%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D Q+  L   I R L    +  I G ++F+ +   ++     PRPETELLV++ALA  
Sbjct: 57  LTDAQQARLGELIQRRLTGCPLQYITGRQEFWGLDFAVTPAVLIPRPETELLVETALAL- 115

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147
           L R ++     I D+G G+GA+ +A+ +E P  + +  D+S  AL +A+ NA  +GV+  
Sbjct: 116 LGRQDR--TAWIADVGVGSGAIAVAMARERPRLQVLATDLSEAALAVARQNAKRHGVAGQ 173

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               R D L     +++      ++SNPPYI S  +  L  EV  F+P+++LDGG DGL 
Sbjct: 174 IRFARGDLLDPAIDAAIR--LKAVLSNPPYIPSGHIPSLQREVAGFEPKLALDGGEDGLD 231

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            YR +A      L   G  ++EIGYNQ   V  +F ++    +   +D  G+DRV+
Sbjct: 232 LYRRLAFKAGLVLEPGGFVALEIGYNQGEAVSSLFAAQGFRDIGLIRDGQGHDRVV 287


>gi|288905237|ref|YP_003430459.1| methyltransferase [Streptococcus gallolyticus UCN34]
 gi|306831308|ref|ZP_07464468.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978213|ref|YP_004287929.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|288731963|emb|CBI13528.1| putative methyltransferase [Streptococcus gallolyticus UCN34]
 gi|304426544|gb|EFM29656.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178141|emb|CBZ48185.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 276

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 14/244 (5%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           I+  +  + ++ +  L   + +  +H S   I G   F ++ L++      PRPETE LV
Sbjct: 40  ILHQNQAITEKDQMLLEQIMAQLTEHRSPQYITGKAYFRDLELSVDERVLIPRPETEELV 99

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L     +   R  +R+LD+GTG+GA+ ++L    P ++    DIS  AL++AK NA+
Sbjct: 100 DLVL-----KENSRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQLAKENAL 154

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N V      +QSD FS +   FD+I+SNPPYI     D +G+ V   +P ++L    DG
Sbjct: 155 KNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLALFADEDG 212

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDR 258
            + YR I +  S HL ++G    EIGY Q    +  + + F +++   V   KD  G DR
Sbjct: 213 FAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKR---VRVIKDMFGKDR 269

Query: 259 VLLF 262
           +++ 
Sbjct: 270 MVVM 273


>gi|125623425|ref|YP_001031908.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492233|emb|CAL97162.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070172|gb|ADJ59572.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 270

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 122/232 (52%), Gaps = 12/232 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D++   LT    R +K+E    I+GW +FY ++  +      PRPETE LV+  L  +  
Sbjct: 45  DQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILTEN-- 102

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D ++ILD+GTG+GA+ ++L K    +     DIS  ALE+A  NA  N V+  F 
Sbjct: 103 ---NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHVNLEF- 158

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+ IAD
Sbjct: 159 -IQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAKNQGLAIYQKIAD 217

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
               HL  DG   +EIGY Q   V  IF+ +  F   LV+  +D  G DR++
Sbjct: 218 QAVNHLTDDGKIYLEIGYKQGKAVQAIFQEK--FTDRLVSIHQDIFGKDRMI 267


>gi|269468199|gb|EEZ79892.1| HemK family modification methylase [uncultured SUP05 cluster
           bacterium]
          Length = 262

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 15/208 (7%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           G + FY++   ++ DT  PRPETELL+D AL  F+    +K +   +LDLGTG+G + + 
Sbjct: 64  GKKGFYHLDFKVTPDTLIPRPETELLIDIALDLFN----DKEEPCHLLDLGTGSGIIAIT 119

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           L  ++P +     DIS  AL++AK+N      + +    Q  WF +V    FD+I+SNPP
Sbjct: 120 LADKNPHWTVSATDISQAALDVAKTN-----TTAQVSFFQGSWFEAVPSQTFDLIISNPP 174

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YIE    D   L+   F+P+ +L  G DGL+  R I      HLNK G   +E G++Q+ 
Sbjct: 175 YIEQ---DDPYLDDLLFEPQTALVSGEDGLNDIRIIISDAPEHLNKGGYLLLEYGFDQQE 231

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            +V +  + K   +  FKDY  NDR +L
Sbjct: 232 RIVDLL-NEKFHHIKTFKDYNNNDRAVL 258


>gi|108804487|ref|YP_644424.1| HemK family modification methylase [Rubrobacter xylanophilus DSM
           9941]
 gi|108765730|gb|ABG04612.1| modification methylase, HemK family [Rubrobacter xylanophilus DSM
           9941]
          Length = 280

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 10/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R LK E + RILG+  F N++L L+ DT  PRP+TE +V++AL     RI+ R + R+
Sbjct: 58  ISRRLKREPVQRILGYAYFRNLKLYLNEDTLIPRPDTESVVEAALE----RIDARPL-RV 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+GA+ +A+ +E P  +    DIS +ALEIA+ NA  NG   RF    +D  S +
Sbjct: 113 LDIGTGSGAIAIAIAQERPGCEVHATDISRRALEIARRNADLNGARVRFHL--ADLVSGL 170

Query: 162 E--GLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              G  D++VSNPPY++       L  EVR++DP I+L  G D  + +R I +     L 
Sbjct: 171 RLPGGVDLLVSNPPYVDVRGAQRRLAPEVREWDPPIALYSGEDEYAFFRRIFEETPEVLK 230

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           ++    +E+G  Q   V+ + E R    +   +D  G+ R +L 
Sbjct: 231 EEADVVLEVGDGQSQKVLEMGEERGFRPLGTRRDLAGDVRAVLL 274


>gi|206603662|gb|EDZ40142.1| Modification methylase (HemK) [Leptospirillum sp. Group II '5-way
           CG']
          Length = 293

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 15/241 (6%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           VL D       + + R  + E  H I G   F   R  ++  T  PRPETE+LV++ L  
Sbjct: 58  VLPDELSACYASWVERRCQREPFHLITGSVPFLEDRYAVAPGTLVPRPETEILVENVLRV 117

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               ++ R   RILDLG G+G + ++LLKE P  + + VD S   LE+++ NA+ +GV  
Sbjct: 118 ----LDSRSPQRILDLGCGSGVLGISLLKEFPKARCLAVDRSVMPLEVSRKNALFHGVQS 173

Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R   +  DW     ++  FD+IVSNPPYI S  + CL  E+  ++PR +LDGG DGL  Y
Sbjct: 174 RIHFIHGDWTEMLRLDQRFDLIVSNPPYIASGDIACLDPEILFYEPREALDGGPDGLVFY 233

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-----FKDYGGNDRVLL 261
           R +   +   L+  G+ +VEIG  Q       F S +  +        F D  G DR++L
Sbjct: 234 RRLMAVLPGLLSSGGVAAVEIGSCQG----DFFRSEEGIVSGCGGPLVFPDILGLDRIVL 289

Query: 262 F 262
           +
Sbjct: 290 W 290


>gi|289577388|ref|YP_003476015.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter italicus Ab9]
 gi|289527101|gb|ADD01453.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter italicus Ab9]
          Length = 279

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 120/216 (55%), Gaps = 9/216 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H     I+  + F  +   +  +   PRPETE+LV+ AL     R+++ DVV  LD+GTG
Sbjct: 66  HIPYQYIVKKQCFMGLEFFVDENVLIPRPETEILVEEALK----RLKRGDVV--LDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165
           +GA+ +++ K  P      VDIS KA+EIAK NA   GV +R   ++SD F ++     F
Sbjct: 120 SGAIAVSIAKYFPDCTVYAVDISKKAIEIAKHNAEKQGVLDRIFFIESDLFCNLPPNLKF 179

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D IVSNPPYI+   ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    
Sbjct: 180 DFIVSNPPYIKKREIELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGF 238

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY+QK +V  + E      V   KD  G DRV++
Sbjct: 239 EIGYSQKEEVTTLLEESGFKDVEIIKDLAGIDRVII 274


>gi|271500558|ref|YP_003333583.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dickeya dadantii Ech586]
 gi|270344113|gb|ACZ76878.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dickeya dadantii Ech586]
          Length = 282

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT      ++   ++ L D +   L + + R +  E I  ++G+R+F+++ 
Sbjct: 22  RDAEILLEHVTDKRRTFLLAFGETELTDDEVLALESLLARRVNGEPIAYLVGYREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         +LDLGTGTGA+ LA+  E P  + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQALAV-LP----DGASSVLDLGTGTGAIALAIAHERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
           VG+D    A+ +A  NA   G+ + RF  L  DWFS + G  F VIVSNPPYI+      
Sbjct: 137 VGIDRQPDAVALASQNARRLGIHNARF--LPGDWFSPLAGQRFAVIVSNPPYIDEHDPHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VR F+P  +L  G  GL+  + I       L  DG   +E G+ Q   V  +   +
Sbjct: 195 LRGDVR-FEPASALVAGAQGLADLQHIIRQAGDFLLDDGWLLLEHGWQQGEAVRGLLSQQ 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V  ++DYG N+RV L
Sbjct: 254 GFVQVKTYRDYGDNERVTL 272


>gi|257452576|ref|ZP_05617875.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059116|ref|ZP_07923601.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684792|gb|EFS21627.1| methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 368

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 7/209 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++ W +FY            PR +TE+LV+ A   SL    +++  +ILD+GTGTGA+ +
Sbjct: 159 LVKW-EFYGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAI 213

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
            L KE P  + +G+DIS +AL +AK N     V      LQS+ F  +EG  FD+IVSNP
Sbjct: 214 TLAKEVPEAEVLGIDISERALSLAKENKEYQFVR-NVSFLQSNLFEKLEGKSFDIIVSNP 272

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI     + L  EV++++P+ +L    DG S Y+ I    + +LN+ G    E+GY Q 
Sbjct: 273 PYIPQEEYEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANDYLNEKGYLLFEVGYQQA 332

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             V +  E  K   +   +DY G+ RV+L
Sbjct: 333 KQVKQWMEEEKFEDLYIAEDYAGHQRVVL 361


>gi|167766741|ref|ZP_02438794.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1]
 gi|167711495|gb|EDS22074.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1]
          Length = 283

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 129/241 (53%), Gaps = 10/241 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D + D          I +  +H  +  ILG ++F      ++ D   PR +TE +++  L
Sbjct: 47  DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
              +P+  K   ++ILDL TG+G  A+ LAL+ +      VG DIS KAL+IAK+N    
Sbjct: 107 -LKVPQTLKN--LKILDLCTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               +F  +QSD F +V G +D+I+SNPPYI +     L  EV+D++P ++LDG  DGL 
Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263
            Y+ I      +LN  G+ + EIGY+Q   V  + E++    V   KD  G DR++  F 
Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279

Query: 264 R 264
           R
Sbjct: 280 R 280


>gi|14517939|gb|AAK64442.1|AF377339_3 protoporphyrinogen oxidase HemK [Myxococcus xanthus]
          Length = 293

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V  LS  ++ VD D  L   +       I R +  E    + G R+FYN    + +
Sbjct: 34  LLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFKVDA 93

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PRPETELLV++AL     R+  +D   R LDL TG+G + ++L  E P    +  D
Sbjct: 94  RVLIPRPETELLVEAAL-----RMLPKDAPGRALDLCTGSGCIAISLAAERPQATVIATD 148

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLE 186
           +S  A  +A+ NA   GV++R   LQ D F+ V     F V+VSNPPYI S  +  L  E
Sbjct: 149 LSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAE 208

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           VR  +P ++LDGG DGL   R +  G  + L   GL ++EIG +Q   V+ +  +     
Sbjct: 209 VRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGYAD 267

Query: 247 VNAFKDYGGNDRV 259
               KD    +R+
Sbjct: 268 ARVEKDLERRERM 280


>gi|313899751|ref|ZP_07833254.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. HGF2]
 gi|312955366|gb|EFR37031.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. HGF2]
          Length = 286

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 12/258 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           ++  +T   +H + ++ D  +           I R L    +  +LG+  FY  R T++ 
Sbjct: 28  YMLELTNKEAHNLYMEFDEEMQPELEELYEEGIQRLLTGIPLGHVLGFEWFYGYRFTVNE 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETE LV + LA        +D V  +D+GTG+GA+ ++L KE P    +  DI
Sbjct: 88  DVLIPRPETEELVANILAAYDEHFSSQDNVMAVDIGTGSGAIAVSLKKEEPNLHMMATDI 147

Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S +A+ +AK NA  N     F   D LQ     +++   D+++SNPPYI     + +   
Sbjct: 148 SEQAVAVAKKNADDNEAIVNFMVGDMLQPLIDRNLK--VDILISNPPYIPR--EEEMEHS 203

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V D++P ++L GG DGL  YR I +  ++ L +  + + E+GYNQK  +    E++K F 
Sbjct: 204 VVDYEPHVALFGGEDGLKFYRIIFENAAKVLKERAMMAFEMGYNQKEALSE--EAKKYFP 261

Query: 247 ---VNAFKDYGGNDRVLL 261
              +   KD  G +R+L 
Sbjct: 262 NARIEVLKDMSGKNRMLF 279


>gi|51596332|ref|YP_070523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 32953]
 gi|170024409|ref|YP_001720914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis YPIII]
 gi|186895375|ref|YP_001872487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis PB1/+]
 gi|51589614|emb|CAH21244.1| putative protoporphyrinogen oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|169750943|gb|ACA68461.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pseudotuberculosis YPIII]
 gi|186698401|gb|ACC89030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pseudotuberculosis PB1/+]
          Length = 276

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E      
Sbjct: 82  LSVSSATLIPRPDTECLVEQALA-RLPSMP----CRILDLGTGTGAIALALASERRDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++       
Sbjct: 137 IAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V    ++   
Sbjct: 196 GDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNSGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   KDYG NDRV L
Sbjct: 255 SAVMTCKDYGNNDRVTL 271


>gi|322832985|ref|YP_004213012.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rahnella sp. Y9602]
 gi|321168186|gb|ADW73885.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rahnella sp. Y9602]
          Length = 289

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 133/259 (51%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   +++L   Q   L   + R  + E +  + G R+F+++ 
Sbjct: 22  RDAEILLGFVTGRARTFIMAFGETLLTAGQLQQLEILLARREQGEPVAYLTGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++S  T  PRP+TE LV+ AL   LP       V ILDLGTGTGA+ LAL  E P  K 
Sbjct: 82  LSVSPATLIPRPDTECLVEQAL-IRLPS----QPVSILDLGTGTGAIALALASERPDCKV 136

Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            GVD+   A+ +A+ NA   N ++ RF  L   WFS V G  F +I SNPPYI++     
Sbjct: 137 TGVDLQPDAVRLAQHNAQKLNILNARF--LPGSWFSPVAGERFALIASNPPYIDAADPHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+    I      +L+K G   +E G+ Q  DV  +    
Sbjct: 195 AKGDVR-FEPASALVAENAGLADLAHIIQAAPAYLHKGGWLLLEHGWQQATDVQALLRDA 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KDYG NDRV L
Sbjct: 254 GYQHIATVKDYGDNDRVSL 272


>gi|110833385|ref|YP_692244.1| methyltransferase [Alcanivorax borkumensis SK2]
 gi|110646496|emb|CAL15972.1| methyltransferase [Alcanivorax borkumensis SK2]
          Length = 280

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 136/260 (52%), Gaps = 10/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V   S   +   P+  L   Q+      + R  + E +  ++G R+F+ 
Sbjct: 20  AALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R ++++DT  PRP+TE LV+  LA +LP        R++DLGTGTGA+ + L  E P +
Sbjct: 80  RRFSVTADTLIPRPDTETLVEQVLALALPA-----NARVVDLGTGTGAIGITLALEQPAW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD S  AL++A +NA   G + R   LQ  W +  +G FD++VSNPPYIE   V  
Sbjct: 135 QVTLVDNSAAALQVAAANARQLGATVR--CLQGSWLTPCDGFFDLVVSNPPYIEDGDVHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L  G  GL+   TIA   +  L   G   +E G+ Q  D VR   + 
Sbjct: 193 AQGDVR-FEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQG-DAVRALLAD 250

Query: 243 KLFL-VNAFKDYGGNDRVLL 261
             F  V   +D GGNDRV L
Sbjct: 251 IGFEDVRTEQDLGGNDRVTL 270


>gi|327481906|gb|AEA85216.1| methyl transferase [Pseudomonas stutzeri DSM 4166]
          Length = 275

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 135/258 (52%), Gaps = 10/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L    G S+  +   P+  V  D    F  + + R  + E +  ILG + F+++ 
Sbjct: 22  DAEWLLAAALGKSTSYLRTWPEREVPGDLAERFAAD-LARRRRGEPVAYILGRQGFWSLE 80

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP+TELLV++AL   LP        R+LDLGTGTGA+ LAL  E P ++ 
Sbjct: 81  LEVAPDTLIPRPDTELLVETALQL-LPATP----ARVLDLGTGTGAIALALAAERPQWQV 135

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
            GVD    A+ +A+ N +  G+       +SDWF+ V G  F +IVSNPPYI +      
Sbjct: 136 SGVDRIEAAVVLAERNRLRLGLGNAHFA-RSDWFAEVTGERFQLIVSNPPYIPASDPHLQ 194

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L  G+DGL   RTI      HL   G   +E G++Q   V  +  +  
Sbjct: 195 QGDVR-FEPQSALVAGVDGLDDIRTIIAQAPAHLTAGGWLLLEHGFDQAPAVRSLMAAHG 253

Query: 244 LFLVNAFKDYGGNDRVLL 261
                + +D GG++RV L
Sbjct: 254 FEACESRRDLGGHERVSL 271


>gi|27363733|ref|NP_759261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio vulnificus CMCP6]
 gi|320157138|ref|YP_004189517.1| methylase of polypeptide chain release factors [Vibrio vulnificus
           MO6-24/O]
 gi|27359849|gb|AAO08788.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio vulnificus CMCP6]
 gi|319932450|gb|ADV87314.1| methylase of polypeptide chain release factors [Vibrio vulnificus
           MO6-24/O]
          Length = 291

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       +   PD +L ++++      + R L  E +  I+G R+F+++  
Sbjct: 29  DAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P    +
Sbjct: 89  KVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCL 183
           GVD+  +A  +A+SNA+   + +     Q  WF  V +G  F +IVSNPPYI+       
Sbjct: 144 GVDLQQEAKLLAESNALALNI-KNVTFKQGSWFEPVAQGTKFALIVSNPPYIDENDPHLN 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L     GL+  R IA     +L   G    E GY+Q + V  I ++  
Sbjct: 203 QGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTLG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KDYGGNDRV L
Sbjct: 262 YQEVATEKDYGGNDRVTL 279


>gi|281200544|gb|EFA74762.1| hypothetical protein PPL_11794 [Polysphondylium pallidum PN500]
          Length = 437

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 130/257 (50%), Gaps = 20/257 (7%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           + P   L D Q    +  I R  K E I  I+G+R F+  +      T  PRP++E L+D
Sbjct: 178 IPPTLNLTDSQYQQFSELISRRFKDEPIAYIVGYRYFWKHQFRCDRSTLIPRPDSETLID 237

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L   E      ILDLGTGTG + L+LL E P   GVGVD S  ALEIAK N+++
Sbjct: 238 QIVM--LREYENFSPTNILDLGTGTGCLLLSLLNEFPNATGVGVDQSLDALEIAKYNSIS 295

Query: 144 -------------NGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVR 188
                        N ++ R + +QS+W SS+     + +I+SNPPYI       L   V+
Sbjct: 296 IDKQNSSDNNSSNNIINNRVEFIQSNWLSSLSNNKKYQLIISNPPYISHSDYINLNPTVK 355

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRH--LNKD-GLCSVEIGYNQKVDVVRIFESRKLF 245
            F+P+ +L    +GL  Y  IA  +     L++D GL   EIG NQ+ D+++I ES    
Sbjct: 356 LFEPKTALVADNNGLKDYEIIAKSIVDKDILDRDNGLVVFEIGMNQENDIIKIMESNGFE 415

Query: 246 LVNAFKDYGGNDRVLLF 262
           L    KD G   R L+F
Sbjct: 416 LKCQGKDLGRIIRCLVF 432


>gi|302879737|ref|YP_003848301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gallionella capsiferriformans ES-2]
 gi|302582526|gb|ADL56537.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gallionella capsiferriformans ES-2]
          Length = 288

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 9/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G++   ++  P+ +L  R+         R L  E I  +LG R+F+ +   ++ 
Sbjct: 41  LLQSVLGVNRAYLLTHPERILTVRETARYVELFARRLAGEPIAYLLGEREFFGLNFKVTP 100

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRP+TELLV+ AL   +P         +LD+GTG+GA+ L++ +E P  + V VD 
Sbjct: 101 ATLIPRPDTELLVEMALQH-IPAGGA-----VLDMGTGSGAIALSIARERPDARVVAVDA 154

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A  NA    +  R   L+SDWFS++ G  FD+I SNPPYIE+  V     +VR
Sbjct: 155 SEAALIVAAENAQRLNLG-RVRLLRSDWFSALSGERFDLIASNPPYIENGDVHLSLGDVR 213

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L  G DGL   R I      +LN  G    E GYNQ   V  + +    F V+
Sbjct: 214 -FEPLSALASGADGLDDIRRIIVEAKAYLNAGGWLMFEHGYNQAERVRGLLQDAGFFGVS 272

Query: 249 AFKDYGGNDRV 259
           +  D  G +RV
Sbjct: 273 SVLDLSGIERV 283


>gi|327474248|gb|EGF19655.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK408]
          Length = 276

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 16/235 (6%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L+DR++     AI   L  H+    I+G  DF+ + L +      PRPETE LV+  L+ 
Sbjct: 49  LEDREQL---KAIQEQLLAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSE 105

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     +   + ILD+GTG+GA+ L L    P ++    D+S  AL +A  NA + G+S 
Sbjct: 106 N-----RESSLSILDIGTGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSL 160

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            F  +QSD F ++ G FD+IVSNPPYI     D +GL V   +P ++L    DG + YR 
Sbjct: 161 TF--IQSDCFEAISGNFDIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRK 218

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           IA+    HL K G   +EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 219 IAEQAGDHLTKKGKIYLEIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271


>gi|325660745|ref|ZP_08149373.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472819|gb|EGC76029.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 277

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 10/226 (4%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R+F  + I R  +   +  I G ++F  +   ++     PR +TE+LV+ AL+  L   E
Sbjct: 56  RYF--DCISRRAQRIPLQHITGEQEFMGLPFIVNEHVLIPRQDTEILVEEALS-HLSGNE 112

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +     +LD+ TG+G + ++L       + VG DIS +AL++AK NA +      F  L+
Sbjct: 113 Q-----VLDMCTGSGCILISLEHYRKGIRAVGADISDEALQVAKRNAESLNADVTF--LK 165

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD F  V   +D+IVSNPPYI +  ++ L  EVR  DP I+LDG  DGL  YR I +   
Sbjct: 166 SDLFEQVAERYDLIVSNPPYIRTKAIEELEEEVRLHDPMIALDGKEDGLYFYRKITEKSR 225

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            HL + G    EIGY+Q  DV ++ E      V   KD  G DRV+
Sbjct: 226 EHLKQGGCLLFEIGYDQGEDVAKMMEKAGFTEVTVKKDLAGLDRVV 271


>gi|256821857|ref|YP_003145820.1| HemK family modification methylase [Kangiella koreensis DSM 16069]
 gi|256795396|gb|ACV26052.1| modification methylase, HemK family [Kangiella koreensis DSM 16069]
          Length = 286

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 127/241 (52%), Gaps = 17/241 (7%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ +L + Q+    + I R  + E    I+G ++F+++ L ++ DT  PRPETE+LV+ A
Sbjct: 52  PEYLLSEDQKSCFEDFISRRRQGEPTAYIIGEQEFWSLTLNVTRDTLIPRPETEMLVEQA 111

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     RI   +   I+DLGTG+GA+ LA+  E P      +D+S  AL++A++NA +N 
Sbjct: 112 LL----RIPSDESYSIVDLGTGSGAIALAIASERPQATVWALDMSELALKVAQANAESNQ 167

Query: 146 VSE-RFDTLQSDWFSS-VEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGI 200
           +    F+  Q  W S+ + G  D+IVSNPPY+   +  + D +      ++P  +L    
Sbjct: 168 IDNVTFE--QGSWLSNWLHGKLDMIVSNPPYVAPNDPHLADLV------YEPVTALVAED 219

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            GLS  R I    + HL  DG    E GY+Q   V  I +      +   KDY G DRV 
Sbjct: 220 KGLSDIRQITQQATEHLKPDGYLLFEHGYDQGQAVREILQQTGFEQIETIKDYAGLDRVT 279

Query: 261 L 261
           L
Sbjct: 280 L 280


>gi|241761552|ref|ZP_04759639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373860|gb|EER63393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 295

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 146/276 (52%), Gaps = 18/276 (6%)

Query: 2   QALRDSHSFLCRVTG--------LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKH 48
           +ALR++   L  V+         L +H + ++ D++L     +         AI R  ++
Sbjct: 25  EALREAARDLATVSMTARLDAELLMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQN 84

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG+RDF+ +RLT++ D   PRP++E L+++A+A+   R +      ILDLGTG+
Sbjct: 85  EPVAYILGYRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGS 142

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           GA+ LA L E    KG+GVD S +A++IA+ NA   G   R +   S W   ++  FD++
Sbjct: 143 GALLLAALDEWKDAKGLGVDASTEAIKIARLNADKCGALPRVEFKISHWGRGIQQKFDLL 202

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           + NPPYI    +  +  +V  ++P ++L  G +GL  YR I   +   L + G+  +EIG
Sbjct: 203 LCNPPYIARDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIG 260

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++Q  +V  I +   L     F D     R +L  R
Sbjct: 261 FDQAENVSMIAKETGL-RSRIFYDLEQRPRCVLLSR 295


>gi|37679116|ref|NP_933725.1| methylase of polypeptide chain release factor [Vibrio vulnificus
           YJ016]
 gi|37197858|dbj|BAC93696.1| methylase of polypeptide chain release factor [Vibrio vulnificus
           YJ016]
          Length = 291

 Score =  129 bits (325), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       +   PD +L ++++      + R L  E +  I+G R+F+++  
Sbjct: 29  DAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLPF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P    +
Sbjct: 89  KVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGL-FDVIVSNPPYIESVIVDCL 183
           GVD+  +A  +A+SNA+   + +     Q  WF   V+G  F +IVSNPPYI+       
Sbjct: 144 GVDLQQEAKLLAESNALALNI-KNVTFKQGSWFEPVVQGTKFALIVSNPPYIDENDPHLN 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L     GL+  R IA     +L   G    E GY+Q + V  I ++  
Sbjct: 203 QGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTLG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KDYGGNDRV L
Sbjct: 262 YQEVATEKDYGGNDRVTL 279


>gi|331085531|ref|ZP_08334615.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407418|gb|EGG86920.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 277

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 10/226 (4%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R+F  + I R  +   +  I G ++F  +   ++     PR +TE+LV+ AL+  L   E
Sbjct: 56  RYF--DCISRRAQRIPLQHITGEQEFMGLPFIVNEHVLIPRQDTEILVEEALS-HLSGNE 112

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +     +LD+ TG+G + ++L       + VG DIS +AL++AK NA +      F  L+
Sbjct: 113 Q-----VLDMCTGSGCILISLEHYRKGIRAVGADISDEALQVAKRNAESLNADVTF--LK 165

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD F  V   +D+IVSNPPYI +  ++ L  EVR  DP I+LDG  DGL  YR I +   
Sbjct: 166 SDLFEQVAERYDLIVSNPPYIRTKTIEELEEEVRLHDPMIALDGKEDGLYFYRKITEKSR 225

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            HL + G    EIGY+Q  DV ++ E      V   KD  G DRV+
Sbjct: 226 EHLKQGGWLLFEIGYDQGEDVAKMMEKAGFTEVTVKKDLAGLDRVV 271


>gi|209965908|ref|YP_002298823.1| modification methylase,hemK family [Rhodospirillum centenum SW]
 gi|209959374|gb|ACJ00011.1| modification methylase,hemK family [Rhodospirillum centenum SW]
          Length = 292

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 120/215 (55%), Gaps = 5/215 (2%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E + R+LG  +F+ + LTL+ DT  PRP+TE +V++ L     R ++   +R+LDLGTG+
Sbjct: 69  EPLQRLLGSWEFWGLDLTLAPDTLIPRPDTETVVEAVLRR---RPDRTAPLRLLDLGTGS 125

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFD 166
           GA+ LALL E P   G+GVD+S  A   A  NA   G+S R   L   W +++     FD
Sbjct: 126 GAILLALLSEYPRATGLGVDLSPAAAATAALNARRLGLSGRARFLAGSWAAALGEAARFD 185

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           V+V NPPYI    +D L  EV   +PR +L GG DGL  YR IA  + R L   GL  +E
Sbjct: 186 VVVGNPPYIPDDEIDGLEPEVARHEPRRALAGGADGLDCYRAIAAELPRLLLPGGLAVLE 245

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G +Q   V  + E+  L  V   +D  G DR  +
Sbjct: 246 HGADQASAVAALLEAAGLGPVGTVRDLAGRDRAAI 280


>gi|90022890|ref|YP_528717.1| protein methyltransferase hemK [Saccharophagus degradans 2-40]
 gi|89952490|gb|ABD82505.1| modification methylase, HemK family [Saccharophagus degradans 2-40]
          Length = 288

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 128/235 (54%), Gaps = 9/235 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--A 87
           D  Q+F   N +V   +  + I  + G ++F+++ L +S  T  PR +TE+LV+ AL  A
Sbjct: 55  DQLQQF---NQLVSQRQQGTPIAYLTGEKEFWSLPLQVSPATLIPRGDTEILVEVALELA 111

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L +   ++ +RILDLGTGTGA+ LAL  E P      VD   +A+E+A+ N    G  
Sbjct: 112 QTLQQKNPQEHIRILDLGTGTGAIALALASELPTANITAVDKMPQAVELAEKNRAALGF- 170

Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +    L SDWFS++    F VIVSNPPYI+         +VR F+P  +L     GL+  
Sbjct: 171 KNVTVLHSDWFSAITLQKFHVIVSNPPYIDEQDPHLKQGDVR-FEPLTALVAPNQGLADI 229

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + IA+   +HL  +G   VE G+ Q   V  +FE      V + KD GGNDRV L
Sbjct: 230 QHIAEHAKQHLLPNGFLCVEHGWQQAEAVRGVFEKNGYVGVRSEKDNGGNDRVTL 284


>gi|254492179|ref|ZP_05105353.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010]
 gi|224462504|gb|EEF78779.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010]
          Length = 278

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 9/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC V   +  ++ V P+  L+ +Q       + R  + E +  + G R F+++ L
Sbjct: 25  DVQILLCHVLDCTPTRLHVSPEHELEAQQWQLFNQLVERRKQGEPVAHLTGSRGFWSLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + + T  PRP+TELLV  AL+   P +       ++DLGTGTGA+ L+L  E      +
Sbjct: 85  LVDNSTLIPRPDTELLVSLALSKIKPNM------TVVDLGTGTGAIALSLAAEKADIDVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL++A+ NA  + + E+   +   W    +   FD++VSNPPYIE        
Sbjct: 139 ATDFSFAALQLAQKNANRHAL-EQVRFINMSWLVGFKSASFDLVVSNPPYIEMRDPHLNQ 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R I    ++ L KDG   VE GY Q   V ++F     
Sbjct: 198 GDVR-FEPLSALVSGPDGLEDIRQIVVQAAKCLKKDGWLLVEHGYQQSAAVQQLFTDAGF 256

Query: 245 FLVNAFKDYGGNDRVLL 261
             ++A +D+GG DR ++
Sbjct: 257 EHISAHQDFGGQDRAVM 273


>gi|302875889|ref|YP_003844522.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
 gi|307689322|ref|ZP_07631768.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
 gi|302578746|gb|ADL52758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
          Length = 283

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 129/260 (49%), Gaps = 7/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  +       +I++    +D        N I    +   +  ILG   F  + 
Sbjct: 24  EDALDLLSNILKKDRLYLIINGLDEVDKESEDIFFNFIEERGRKRPLQYILGNATFMELS 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR +TE+LV+  L +    I+K +   I D+ TGTGA+ +A+    P    
Sbjct: 84  FKVKEGVLIPRADTEILVEEVLNY----IDKNNYKDICDVCTGTGAIGIAIGYHRPTTTI 139

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181
              DIS  A EIAK N     V +  +  +SD  S  EGL   +DVIVSNPPYI + +++
Sbjct: 140 DICDISEIAEEIAKENIFKLKVEKNVEFYRSDLLSFAEGLHKKYDVIVSNPPYIRTSVIE 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V++++P ++LDGG DGL  YR I     + LNK GL + EIGY+Q  +V  + + 
Sbjct: 200 ALMEDVKNYEPHLALDGGEDGLIFYRKITKDSCKFLNKGGLLAFEIGYDQGEEVSELLKE 259

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V   KD G NDRV+L
Sbjct: 260 YGFIDVIVKKDLGNNDRVVL 279


>gi|259908617|ref|YP_002648973.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
 gi|224964239|emb|CAX55746.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
 gi|283478590|emb|CAY74506.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia pyrifoliae DSM 12163]
          Length = 281

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DS LD      L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRAWLIGFDDSELDAAALAQLDALLKRRTAGEPIAYLTGEREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L+++ DT  PRP++E+LV+ ALA  LP         ILDLGTG+GA+ LAL  E P  + 
Sbjct: 82  LSVTPDTLIPRPDSEVLVEQALAH-LPVAAG----SILDLGTGSGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +G+D    A+ +A+ NA   G++     +  DWFS++ +  F VIVSNPPYI++      
Sbjct: 137 IGIDRIPAAVALAQHNAARLGLTNA-TFMPGDWFSALKQQQFAVIVSNPPYIDATDKHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I     
Sbjct: 196 QGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSDHH 254

Query: 244 LFLVNAFKDYGGNDRV 259
              +   +DYGGNDRV
Sbjct: 255 FCQIATCQDYGGNDRV 270


>gi|255319518|ref|ZP_05360732.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SK82]
 gi|262378459|ref|ZP_06071616.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SH164]
 gi|255303458|gb|EET82661.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SK82]
 gi|262299744|gb|EEY87656.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SH164]
          Length = 274

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 123/241 (51%), Gaps = 17/241 (7%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L   Q+     A+ R    E +  ILG + F+ + L ++ DT  PRP+TE+LV++ L
Sbjct: 41  DKELTAEQQHAYLAALARLEAGEPLAYILGSQPFWTLDLKVTRDTLVPRPDTEVLVETVL 100

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              LP     +  +++DLGTGTGA+ LAL  E P++  +  D+    L +A+ NA  +G+
Sbjct: 101 TLELP-----EETKMVDLGTGTGAIALALASEKPYWSVLATDVYMPTLTVARENADKHGL 155

Query: 147 SERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGI 200
            ++ +     WF+++    E +FD+IVSNPPYI     D     ++D   +P  +L    
Sbjct: 156 -QQVEFACGAWFAALNQLPEPMFDLIVSNPPYI-----DAEDRHMKDLATEPVRALVALK 209

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            GL+   TI +     L   G   +E GY Q   V   FE +    V   KDY GNDRV 
Sbjct: 210 QGLADLETIIEQGKSWLRPKGWIVLEHGYEQAEAVRSFFEHKGFQSVRTVKDYNGNDRVT 269

Query: 261 L 261
           L
Sbjct: 270 L 270


>gi|15616791|ref|NP_240003.1| HemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681546|ref|YP_002467931.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|257471229|ref|ZP_05635228.1| HemK protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11132929|sp|P57269|HEMK_BUCAI RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.BusHemKP
 gi|25403559|pir||A84950 hemK protein [imported] - Buchnera sp. (strain APS)
 gi|10038854|dbj|BAB12889.1| hemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219624389|gb|ACL30544.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
          Length = 277

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 136/256 (53%), Gaps = 7/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  VT  +   +I   +  L ++Q  +L + I R    E I  I+  ++F+++ L
Sbjct: 23  ESELLLSYVTKHTRSFIISSDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S DT  PRP+TE+LV+ AL+    +I K +   ILDLGTG GA+ LAL   +  +  +
Sbjct: 83  CVSYDTLIPRPDTEILVERALS----KI-KSNSACILDLGTGCGAIALALASINSNWNII 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL IA+ NA      +      SDWF +++  F++IVSNPPY+    +     
Sbjct: 138 GIDKSENALAIARINASKLNF-KNVTFFFSDWFLNIKKKFNIIVSNPPYVSKKEIKFFKK 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++  F+P  +L    +GLS    I      +L   G   +E G+ QKV V  +F+     
Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255

Query: 246 LVNAFKDYGGNDRVLL 261
            + +++DYGGNDRV +
Sbjct: 256 EIESYQDYGGNDRVTI 271


>gi|88607095|ref|YP_505733.1| HemK family modification methylase [Anaplasma phagocytophilum HZ]
 gi|88598158|gb|ABD43628.1| modification methylase, HemK family [Anaplasma phagocytophilum HZ]
          Length = 282

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 5/226 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V GLS H+V+++PD V+   +       I R L    +  IL  R+F+++  
Sbjct: 28  DARLIAGHVLGLSEHEVLINPDLVVTAAKTKEFFEVIARRLAGVPVSHILRRREFWSIDF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +  D  +PR +TE ++  A+        +   + I DLGTGT  + +ALL       GV
Sbjct: 88  AVGPDVLDPRQDTETIISEAIKLH----NRNRRITIADLGTGTACIIIALLSHYKNAVGV 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             + S KA  IA  N   +G++ R    ++ W     G FD+IVSNPPYI+   +  L  
Sbjct: 144 AFEKSTKAYRIAHQNLQQHGMTGRVRLHRASW-EKCNGKFDLIVSNPPYIKRCKISGLQP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           EVR ++P ++LDGG+ G+  Y  I + + R L  DG   +EIG +Q
Sbjct: 203 EVRLYEPMVALDGGVRGMEKYLQIFEILRRCLKPDGKAILEIGEDQ 248


>gi|297543675|ref|YP_003675977.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296841450|gb|ADH59966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 279

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 120/216 (55%), Gaps = 9/216 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H     I+  + F  +   +  +   PRPETE+LV+     +L R+++ DVV  LD+GTG
Sbjct: 66  HIPYQYIVKKQYFMGLEFFVDENVLIPRPETEILVEE----TLKRLKRGDVV--LDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165
           +GA+ +++ K  P      VDIS KA+EIAK NA   GV +R   ++SD F ++     F
Sbjct: 120 SGAIAVSIAKYFPDCTVYAVDISKKAIEIAKHNAKKQGVLDRIFFIESDLFCNLPPNLKF 179

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D IVSNPPYI+   ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    
Sbjct: 180 DFIVSNPPYIKKREIELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGF 238

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY+QK +V  + E      V   KD  G DRV++
Sbjct: 239 EIGYSQKEEVTTLLEESGFKDVEIIKDLAGIDRVII 274


>gi|152980147|ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium
           sp. Marseille]
 gi|151280224|gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium
           sp. Marseille]
          Length = 280

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 131/251 (52%), Gaps = 10/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VT LS  Q+I   +  L   +   L+    R L  E I  + G R+F+ +   +S 
Sbjct: 31  LLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRLAGEPIAYLTGEREFFGLSFDVSP 90

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRP+TELLV+ AL +  P+       R+LD+GTG+GA+ +A+    P      +D+
Sbjct: 91  AVLIPRPDTELLVELALHYLPPQ------GRVLDMGTGSGAIAVAIAHARPDAFVTALDV 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +AL IA+ NA  N V   F  L+SDWFS+V E  FD+IVSNPPYI +        ++R
Sbjct: 145 SAEALAIAEGNARKNQVQVNF--LRSDWFSAVKEQRFDLIVSNPPYIVAGDPHLSEGDLR 202

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    +GLS  +TI    +R+L       +E GY+Q   V  +  +     V 
Sbjct: 203 -FEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHGYDQAAAVRDVLATHGFTEVQ 261

Query: 249 AFKDYGGNDRV 259
           +++D  G +RV
Sbjct: 262 SWRDLAGIERV 272


>gi|209694373|ref|YP_002262301.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238]
 gi|208008324|emb|CAQ78476.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238]
          Length = 288

 Score =  129 bits (324), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ + +     + + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKLVAETEYNAFESLLSRRLSGEPIAYIIGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  EK     +LDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALEHLSPSSEK-----VLDLGTGTGAIALAIASEMPDMCVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+ +AK NA  N +    +  Q  WF  +  +  F +IVSNPPYI+       
Sbjct: 142 GVDYQYDAVALAKDNAKDNNILNT-EFRQGSWFDPIRMDEQFSIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G +    I +    HL ++G   +E G+ Q   +   FE   
Sbjct: 201 QGDVR-FEPQTALVAEKEGFADLIHIMEHSRTHLVENGWLLMEHGFEQGKQLRDYFEEYG 259

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DY GNDRV L
Sbjct: 260 FINVKTEQDYAGNDRVTL 277


>gi|260767752|ref|ZP_05876687.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP
           102972]
 gi|260617261|gb|EEX42445.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP
           102972]
          Length = 278

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 21/264 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +LDD         + R L  E +  I+G R+F+++ L
Sbjct: 14  DAAVLLCHALDKPRSYLLTWPDKILDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLPL 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK   +   ILDLGTGTGA+ LAL  E P  +
Sbjct: 74  KVSPSTLIPRPDTERLVEVAL-------EKAQTLDGDILDLGTGTGAIALALASELPQRR 126

Query: 124 GVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
            VG+D+  +A ++A  NA    +TN        LQ  WF  +     F +IVSNPPYIE 
Sbjct: 127 VVGIDLRDEAQQLASDNANRLHLTN-----VTFLQGSWFEPLSHGTKFALIVSNPPYIEE 181

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P+ +L    +GL+  + I+D    +L   G  + E GY+Q   V  
Sbjct: 182 NDPHLAQGDVR-FEPKSALVAADNGLADIKYISDAGRDYLQSGGWLAFEHGYDQGASVRT 240

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           I ++     V   +DY G+DRV L
Sbjct: 241 IMQALGYQHVITEQDYAGHDRVTL 264


>gi|51474015|ref|YP_067772.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia typhi str. Wilmington]
 gi|81389917|sp|Q68VR6|HEMK_RICTY RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|51460327|gb|AAU04290.1| bifunctional methyltransferase [Rickettsia typhi str. Wilmington]
          Length = 518

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 137/266 (51%), Gaps = 15/266 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VT      +++  +  L + +       + R L+HE I  I G ++FY+    ++ 
Sbjct: 31  LLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLEHEPIAYITGIKEFYSREFIVNK 90

Query: 70  DTFEPRPETELLVDSALAFSLPR--------IEKRDVVR------ILDLGTGTGAVCLAL 115
               PR +TE+L+D  +   + R        ++  D V+      IL+LGTG+G + ++L
Sbjct: 91  HVLIPRIDTEILIDVVIGLVVSRNDLNTCSKLKSLDSVKTIQHYNILELGTGSGCIAISL 150

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
           L E P    +  DIS  A+++AKSN + + V++R   + S+WF  + +  FD+IVSNPPY
Sbjct: 151 LCELPNTSVIATDISVDAIKVAKSNTIKHNVTDRIQIIHSNWFEKLNKQKFDLIVSNPPY 210

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I       + +E  +++P I+L    DGL  Y  IA    + L  +G   +EIG++Q   
Sbjct: 211 ISHSEKLEMAIETINYEPHIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAEK 270

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           V +IF +    + + ++D   ++RV+
Sbjct: 271 VCQIFLNYGYNIDHIYQDLQSHNRVI 296


>gi|194364468|ref|YP_002027078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas maltophilia R551-3]
 gi|194347272|gb|ACF50395.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas maltophilia R551-3]
          Length = 285

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 16/261 (6%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           H   C  + L +H    DP   LD   +      + R +  E +  + G R F+ + L +
Sbjct: 35  HVLDCPRSWLFAH--ATDP---LDANDQAAFEALLARRVAGEPVAYLTGRRGFWTLDLEV 89

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              T  PRPETELLV+     +L R+ +   +++ DLGTG+GA+ LAL  E P  + +  
Sbjct: 90  DPATLIPRPETELLVE----LALERLPQDRALQLADLGTGSGAIALALASERPQAQVLAT 145

Query: 128 DISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
           D S  AL +A  NA  + +   RF     DW++ ++G  FD+I SNPPYI S   D   L
Sbjct: 146 DASPGALTVAARNAARHELGNVRFAEGGHDWYAPLQGARFDLIASNPPYIAS---DDPHL 202

Query: 186 EVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           E  D  F+P  +L  G+DGL   R I DG   HL   G   +E G++Q   +  +F++  
Sbjct: 203 EQGDLRFEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGAAIRALFDAAG 262

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   +D    DR+ L  R
Sbjct: 263 FAEVQTVQDLEQRDRITLGRR 283


>gi|223932123|ref|ZP_03624127.1| modification methylase, HemK family [Streptococcus suis 89/1591]
 gi|302023744|ref|ZP_07248955.1| methyltransferase [Streptococcus suis 05HAS68]
 gi|330832777|ref|YP_004401602.1| modification methylase, HemK family [Streptococcus suis ST3]
 gi|223899104|gb|EEF65461.1| modification methylase, HemK family [Streptococcus suis 89/1591]
 gi|329307000|gb|AEB81416.1| modification methylase, HemK family [Streptococcus suis ST3]
          Length = 277

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 122/227 (53%), Gaps = 15/227 (6%)

Query: 40  NAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           +AI + L +H     I+G  DF+ +   +      PRPETE LV+  L     +      
Sbjct: 56  DAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPRPETEELVNLIL-----QENSGAG 110

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+GTG+GA+ ++L K    ++ V VDIS  AL +A+ NA TN VS  F  L+SD F
Sbjct: 111 LRILDIGTGSGAIAISLAKARSDWEVVAVDISKDALAVAQENARTNQVSVHF--LESDVF 168

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +V G FD+IVSNPPYI     D +GL V   +P ++L    DG++ YR IA+     L 
Sbjct: 169 QAVTGQFDLIVSNPPYISPDDTDEVGLNVLASEPHLALFAEEDGMAIYRQIAEQAGAFLK 228

Query: 219 KDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLL 261
           + G    EIGY Q  D+  +    F  ++   +   KD  G DR ++
Sbjct: 229 EKGKLYFEIGYKQGQDLTDLLALHFPKKR---IRVLKDQFGQDRKVI 272


>gi|269102027|ref|ZP_06154724.1| Polypeptide chain release factor methylase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268161925|gb|EEZ40421.1| Polypeptide chain release factor methylase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 282

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  LD+ Q    ++ + R L  E +  I+G R+F+++ L
Sbjct: 27  DAAVLLCHALDKPRSYLLTWPEKELDESQFSLFSHCVSRRLAGEPVAYIIGVREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+     +L +I  +   ++LDLGTGTGA+ LA+  E P     
Sbjct: 87  KVAPSTLIPRPDTERLVE----LALDKIPAQP-CQVLDLGTGTGAIALAIASERPDITVT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
           G+D+  +A ++A  N  T G +     L   W+S +  +  F VIVSNPPYI+       
Sbjct: 142 GIDLRQEAAQLATENGATLGFN-NVQFLAGSWYSPLAEIQQFAVIVSNPPYIDEQDPHLD 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +GL+  + IA+   +HL  +G   +E G+ Q + V  I     
Sbjct: 201 QGDVR-FEPKSALVAADNGLADIKIIAEQGRQHLQTNGWLLLEHGFEQGLAVREILTKLG 259

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   +DY G DRV L C
Sbjct: 260 YQAVVTEQDYAGLDRVTLGC 279


>gi|327462228|gb|EGF08555.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1]
 gi|327489583|gb|EGF21375.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1058]
          Length = 276

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 124/235 (52%), Gaps = 16/235 (6%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L+DR++     AI   L  H+    I+G  DF+ + L +      PRPETE LV+  L+ 
Sbjct: 49  LEDREQL---KAIQEQLLAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSE 105

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     +   + ILD+GTG+GA+ L L    P ++    D+S  AL +A  NA + G+S 
Sbjct: 106 N-----RESSLSILDIGTGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSL 160

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            F  +QSD F ++ G FD+IVSNPPYI     D +GL V   +P ++L    DG + YR 
Sbjct: 161 TF--IQSDCFEAISGNFDIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRK 218

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           IA+    HL K G   +EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 219 IAEQAGDHLTKKGKIYLEIGYKQGDGVRELL--KKSFPQKRIRVLKDRFGKDRMV 271


>gi|297539751|ref|YP_003675520.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylotenera sp. 301]
 gi|297259098|gb|ADI30943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylotenera sp. 301]
          Length = 320

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 121/248 (48%), Gaps = 33/248 (13%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--------- 94
           R L  E +  ILG R+FY + L ++ DT  PRP+TE LV++ALA  +P  E         
Sbjct: 64  RRLAGEPMAYILGNREFYGLDLLVTPDTLIPRPDTETLVEAALA-KIPLSESTKNLSFRR 122

Query: 95  --------------------KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
                               + D +++LDLGTGTGA+ LA+ K  P      VD S  AL
Sbjct: 123 KSESSGVEQHDYETLDSDFRRNDDLKVLDLGTGTGAIALAIAKNRPKASITAVDASDAAL 182

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           EIAK N+    +     TL S+WF ++    FDVIVSNPPYIE         ++R F+P 
Sbjct: 183 EIAKQNSQQLSIINVEFTL-SNWFENLSNQRFDVIVSNPPYIEEHDAHLTQGDLR-FEPL 240

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L  G+DGL   R I      +L   G   +E GYNQ   V  +     L  +   KD 
Sbjct: 241 SALASGMDGLDDIRQIIGDCLIYLKPQGWLMLEHGYNQAEQVADLMADAGLTNIETIKDL 300

Query: 254 GGNDRVLL 261
           G NDRV +
Sbjct: 301 GNNDRVTI 308


>gi|329121080|ref|ZP_08249711.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus
           DSM 19965]
 gi|327471242|gb|EGF16696.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus
           DSM 19965]
          Length = 288

 Score =  129 bits (323), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 124/219 (56%), Gaps = 10/219 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGT 108
           S+  ++G +DF   +  ++     PRP+TE  V+  +     +I K D+ + + D+G G+
Sbjct: 75  SVATLIGEKDFMGFKFFVNDKVLIPRPDTETWVEKVI-----QIHKNDIELFVADIGCGS 129

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFD 166
           GA+  + LK     KGVG+DIS  A+EI+K N     +  R +  + D+F++++    FD
Sbjct: 130 GAIICSFLKYCKNAKGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFD 189

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I SNPPYI +  ++ L  EV++ +P I+LDGG DGL+ YR IA+   + LN  G  +VE
Sbjct: 190 GIFSNPPYIPTDDIEFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVE 248

Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           +G +Q + V  +FES   F      KDYG  +R +   R
Sbjct: 249 VGIHQSLIVKEMFESTGYFTDFEIIKDYGNIERAVYCIR 287


>gi|307731137|ref|YP_003908361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1003]
 gi|307585672|gb|ADN59070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1003]
          Length = 289

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D  L+    +R+    A  R +  E + +++G R+F+ +
Sbjct: 28  EARILLTHVLGWRQTQLITRADEALESACVERYLALQA--RRVAGEPVAQLVGVREFFGL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  +
Sbjct: 86  EFEVTPHVLIPRPETELLVETALAA----MENLARPRVLDLGTGTGAIAVAIAAMRPDAQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S +AL++A+ NA     ++R       +QSDW+ S+E    FDVIVSNPPYI S
Sbjct: 142 VSALDRSTEALKVAERNAARLLDAKRPGGAVTFMQSDWYGSLESTLRFDVIVSNPPYIAS 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R ++PR +L    DGLS  R I  G    L   G+  +E GY+Q   V  
Sbjct: 202 GDPHLTQGDLR-YEPRGALTDEADGLSAIRKIVAGAPARLAPQGVLWMEHGYDQAQAVRA 260

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  ++    V + +D  G +R+
Sbjct: 261 LLTAQGFADVRSERDLAGIERI 282


>gi|238927405|ref|ZP_04659165.1| polypeptide chain release factor methyltransferase HemK
           [Selenomonas flueggei ATCC 43531]
 gi|238884687|gb|EEQ48325.1| polypeptide chain release factor methyltransferase HemK
           [Selenomonas flueggei ATCC 43531]
          Length = 292

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 123/221 (55%), Gaps = 9/221 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRIL 102
           +H  I  ILG R+F  +   ++ DT  PRP+TE+L    VD+  A +   +E+   +R  
Sbjct: 71  RHVPIAYILGRREFMGLPFRVTRDTLIPRPDTEILAQFAVDTLRARASAGMEE---LRFA 127

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTGA+ L++L  +   +   VDIS +A  +   NA+  G+  R + L  D    + 
Sbjct: 128 DIGTGTGAIALSVLNYTEGTRADAVDISPEAAAVTAENAMALGLMSRIEILIGDLAVPLL 187

Query: 163 GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  +D+I+SNPPYI +  VD L  EVR  +P ++LDGG DGLS YR +       L + G
Sbjct: 188 GRSYDMILSNPPYIPTAEVDTLMEEVRSHEPHLALDGGADGLSVYRQLMADAPDLLKEGG 247

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
           + +VE+G ++  DV  +  +    +  A  +D  G +RV++
Sbjct: 248 IIAVEVGIHEAADVASLMAAHPRIVRTAMRRDLAGIERVVI 288


>gi|169335809|ref|ZP_02863002.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258547|gb|EDS72513.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM
           17244]
          Length = 279

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 5/239 (2%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           I D +  L D +       + +   H     I G ++F  +   +  +T  PRPETE++V
Sbjct: 42  ITDLNYELTDEEINEYEQLVNKRCAHVPFGYITGIKEFMGLDFHVDRETLIPRPETEIIV 101

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  +        K   + IL++G G+G + ++  K       +GVDI+ KAL IA  N  
Sbjct: 102 EYMIEHF-----KGITLDILEIGVGSGCISISTAKYLENVNILGVDINEKALSIANKNIE 156

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            + V +R   ++SD + +VEG FDVI+SNPPYI   I++ L  +V+ ++P ++LDGG DG
Sbjct: 157 YHNVDDRVKFIRSDIYENVEGKFDVIISNPPYIRKDIIETLEDDVKKYEPILALDGGEDG 216

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  YR I    S++LN+ G    EIGY+Q   V  +        +    D  G DR ++
Sbjct: 217 LYFYREIIKNASKYLNESGHIIFEIGYDQGEQVKDLLIQNNFTNIEIINDLAGFDRTVV 275


>gi|315179417|gb|ADT86331.1| hemK protein [Vibrio furnissii NCTC 11218]
          Length = 278

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 21/264 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +LDD         + R L  E +  I+G R+F+++ L
Sbjct: 14  DAAVLLCHALDKPRSYLLTWPDKLLDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLPL 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK   +   ILDLGTGTGA+ LAL  E P  +
Sbjct: 74  KVSPSTLIPRPDTERLVEVAL-------EKAQTLTGDILDLGTGTGAIALALASELPQRR 126

Query: 124 GVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
            VG+D+  +A ++A  NA    +TN        LQ  WF  +     F +IVSNPPYIE 
Sbjct: 127 VVGIDLRDEAQQLASDNANRLHLTN-----VTFLQGSWFEPLSHGTKFALIVSNPPYIEE 181

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P+ +L    +GL+  + I+D    +L   G  + E GY+Q   V  
Sbjct: 182 NDPHLAQGDVR-FEPKSALVAADNGLADIKHISDAGRDYLQSGGWLAFEHGYDQGASVRT 240

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           I ++     V   +DY G+DRV L
Sbjct: 241 IMQALGYQHVITEQDYAGHDRVTL 264


>gi|167041274|gb|ABZ06030.1| putative CheR methyltransferase, SAM binding domain protein
           [uncultured marine microorganism HF4000_005D21]
 gi|167045779|gb|ABZ10425.1| putative methyltransferase small domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 279

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 126/226 (55%), Gaps = 9/226 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
             +AI R +  E +  I+G ++F++    ++  T  PRPETELL+   + F      K  
Sbjct: 57  FNHAIQRRINREPVAYIIGKKEFWSQDFAVNQATLVPRPETELLIYKVVDFF-----KNK 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQS 155
            + +LD+GTG+G + L++LKE    +GVG+DIS KA++ A+ N+    +    +F     
Sbjct: 112 RINVLDIGTGSGCILLSILKELDLSRGVGIDISTKAIKTAQINSKNLNLFHQSKFKVFDI 171

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             F+   G +D+IVSNPPYI S  +  L  ++ +++P ++L+GG+DGL   R +    + 
Sbjct: 172 SKFNV--GKYDLIVSNPPYIPSKDIKNLSKDIINYEPLVALNGGLDGLDLIRKVIYKSNS 229

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            L K+GL ++EIG+NQ + V  +        ++   DY  N R ++
Sbjct: 230 LLKKNGLLAIEIGFNQYLKVSSLLRQYGFREMSRQCDYNHNVRCII 275


>gi|254000221|ref|YP_003052284.1| HemK family modification methylase [Methylovorus sp. SIP3-4]
 gi|253986900|gb|ACT51757.1| modification methylase, HemK family [Methylovorus sp. SIP3-4]
          Length = 297

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 116/232 (50%), Gaps = 21/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  ILG R+F+ +RL +S  T  PRP+TE LV++ALA    RI   D   +LD
Sbjct: 68  RRLAGEPIAYILGNREFFGLRLAVSPATLIPRPDTETLVEAALA----RIPSEDTREVLD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV----------TNGVSE-RFDT 152
           LGTGTGA+ LA+    P  + +GVD S  AL++A+ NA           T+G+++   + 
Sbjct: 124 LGTGTGAIALAIAAHRPKSRVIGVDASAAALQVARQNAEALGLAITEPDTHGITKGNVEF 183

Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209
               WF+ + GL FDVIVSNPPYI     D   L+  D   +P  +L  G DGL   R I
Sbjct: 184 RLGSWFTPLAGLKFDVIVSNPPYIRK---DDPHLQQGDLRHEPFSALASGADGLDDIRII 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
                 H    G   +E GY+Q   V  +        V    D  G  RV L
Sbjct: 241 VQHAPAHFQPSGWLLLEHGYDQADAVATLMRDTGFSDVQHAHDLAGIARVTL 292


>gi|242239291|ref|YP_002987472.1| modification methylase, HemK family [Dickeya dadantii Ech703]
 gi|242131348|gb|ACS85650.1| modification methylase, HemK family [Dickeya dadantii Ech703]
          Length = 279

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 135/260 (51%), Gaps = 12/260 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     +I   +++L D Q+  L   + R    E I  + G ++F+++ 
Sbjct: 22  RDAEILLGHVTGKRRTFLIAFGETLLSDDQQQMLEGLLTRRSAGEPIAYLTGEKEFWSLA 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL    P+      + +LDLGTGTGA+ LA+  E P    
Sbjct: 82  LEVSPATLIPRPDTECLVEQALQRLPPQ-----ALSVLDLGTGTGAIALAIASERPACDV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           +GVD    A+ +A  NA   G+   RF  L  DWFSS+ E  F +IVSNPPYI++     
Sbjct: 137 LGVDCQPDAVTLATHNARRLGIHNVRF--LLGDWFSSLNEQRFSMIVSNPPYIDAADPHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFES 241
              +VR ++P  +L  G  GL+  R I    SRH   D G   +E G+ Q   V  +F  
Sbjct: 195 NCGDVR-YEPASALVAGEHGLADLRHIVQ-YSRHFLLDGGWLLLEHGWLQGESVRELFWQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V   +DYGGN+RV L
Sbjct: 253 YGFSQVETCRDYGGNERVSL 272


>gi|119472533|ref|ZP_01614581.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Alteromonadales bacterium TW-7]
 gi|119444857|gb|EAW26157.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Alteromonadales bacterium TW-7]
          Length = 279

 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 127/257 (49%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       +   P+ +L   Q+        R L  E +  I G R+F+++ L
Sbjct: 26  DAQVLLLHVLDKPRSYLFTWPERLLSTEQQHSFDTLCARRLSGEPVAHITGQREFWSLTL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++ T  PRP+TE LV++AL   +      +  ++LDLGTGTGA+ LAL  E P +   
Sbjct: 86  EVNATTLIPRPDTETLVEAALGLGI-----SENAKVLDLGTGTGAIALALGSEMPLWNIT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            VD    A+ +A  N    G+S      QS+WFSS++   FD+IV+NPPYIES       
Sbjct: 141 AVDKVTDAVTLATRNQQRLGLS-NVRVKQSNWFSSLDNEYFDLIVTNPPYIESSDEHLAQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L     G+S  + I      +L   G   +E GY+Q   V   F++   
Sbjct: 200 GDVR-FEPLSALVAEDSGMSDIKQIITHSRDYLLSSGYLLIEHGYDQGFAVREFFKTMAF 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             +   KD G NDRV L
Sbjct: 259 VNIKTIKDLGENDRVTL 275


>gi|226315062|ref|YP_002774958.1| hypothetical protein BBR47_54770 [Brevibacillus brevis NBRC 100599]
 gi|226098012|dbj|BAH46454.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 296

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 7/243 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PDS+ D      L    VR   +E +  + G ++FY    T+      PRPETE+LV+  
Sbjct: 56  PDSI-DAETLVKLDGLCVRRANNEPLQYMFGEQEFYGRPFTVRPGVLIPRPETEILVEQV 114

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A +     + + + ++D+GTG+GA+C+ L  E P ++   VD+S +A  IA+ NA   G
Sbjct: 115 MAAATMLWPESEELAVVDIGTGSGAICITLALEKPQWRVTTVDLSLEATAIARENASRLG 174

Query: 146 VSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              RF  LQ D    +       DV+VSNPPYI S  V+ L  EVR  +PR++LDGG DG
Sbjct: 175 ADVRF--LQGDLVQPLLEAGEKVDVLVSNPPYIPSRDVEELDDEVRVHEPRLALDGGEDG 232

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261
           L  YR + + +   L    + + E+G  Q  DV  +  +  +   V    D  G +RV++
Sbjct: 233 LDCYRRLCEALPNLLKDRAVVAFEVGIYQARDVAALMRASGVMDEVEIVPDLAGIERVVI 292

Query: 262 FCR 264
             R
Sbjct: 293 GVR 295


>gi|328952116|ref|YP_004369450.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobacca acetoxidans DSM 11109]
 gi|328452440|gb|AEB08269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobacca acetoxidans DSM 11109]
          Length = 296

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 118/215 (54%), Gaps = 2/215 (0%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L + +       + R L HE    I G ++F+++   ++     PRPETELLV+ A 
Sbjct: 54  DQPLGENELSCYKKLLKRRLAHEPTQYITGRQEFWSLDFLVTPAVLIPRPETELLVEVAA 113

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A+   +  +   VR++D+GTG+G + + L KE P  +   +D S +AL +A+ NA  +GV
Sbjct: 114 AYLQGQRAEETSVRLIDVGTGSGVLAVVLAKEHPQAQVTALDQSWEALCLARQNARRHGV 173

Query: 147 SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            ER   +  D  +++  E  FD+IVSN PY+ +     L  +++D++PR++LDGG DGL 
Sbjct: 174 EERIRFIMGDLLAALRPEAQFDLIVSNAPYVPTAEWLRLPSDIKDYEPRLALDGGGDGLD 233

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +      +L   GL ++E+G  Q   V ++ 
Sbjct: 234 VIRRLVQAAPGYLKAGGLLALEVGQGQSAAVEQLL 268


>gi|329296265|ref|ZP_08253601.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Plautia stali symbiont]
          Length = 276

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 96/259 (37%), Positives = 134/259 (51%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   +I   DS L+D Q   L   + R ++ E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRSGLIAFDDSPLNDAQLAQLETLLARRVRGEPIAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE+LV+ AL   LP         +LDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LRVSDATLIPRPDTEVLVEQAL-LRLPATPS----AVLDLGTGTGAIALALASERPDCQI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
            G D    A+ +A+ NA    ++     L S WF  +    FD+IVSNPPYI++      
Sbjct: 137 TGCDRIAAAVALAQDNAQRLHLTNAGFVL-SHWFDDLPAQRFDLIVSNPPYIDAADEHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+  R I +     L   G   +E G+ Q  + VR   +R 
Sbjct: 196 QGDVR-FEPLSALVAEEAGLADLRLIIERAPHWLQPQGWLLLEHGWQQG-EAVRTLLTRN 253

Query: 244 LFL-VNAFKDYGGNDRVLL 261
            FL V   +DYGGN RV L
Sbjct: 254 GFLAVTTVEDYGGNPRVTL 272


>gi|313202187|ref|YP_004040845.1| HemK family modification methylase [Methylovorus sp. MP688]
 gi|312441503|gb|ADQ85609.1| modification methylase, HemK family [Methylovorus sp. MP688]
          Length = 297

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 120/232 (51%), Gaps = 21/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+F+ +RL +S  T  PRP+TE LV++ALA  +P  E R   ++LD
Sbjct: 68  RRLAGEPVAYILGNREFFGLRLAVSPATLIPRPDTETLVEAALAH-IPSEETR---QVLD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSD--- 156
           LGTGTGA+ LA+    P  + + VD S  AL++A+ NA   G++       DT + +   
Sbjct: 124 LGTGTGAIALAIAAHRPQSRVIAVDASAAALQVARHNAEALGLATPEAGDQDTTKGNVEF 183

Query: 157 ----WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209
               WF+ + GL FDVIVSNPPYI     D   L+  D   +P  +L  G+DGL   R I
Sbjct: 184 RLGSWFTPLAGLKFDVIVSNPPYIRK---DDPHLQQGDLRHEPLSALASGVDGLDDIRII 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
                 HL   G   +E GY+Q   V  +  +     V    D  G  RV L
Sbjct: 241 VQHAPAHLQPSGWLLLEHGYDQADAVATLMRNTGFSDVQHAHDLAGIARVTL 292


>gi|291527967|emb|CBK93553.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium rectale M104/1]
          Length = 283

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 116/210 (55%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I+G ++F  ++  ++S+   PR +TE LV+ AL    P +      R+LD+ TG+G 
Sbjct: 70  LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++LK +    G   DIS +AL +AK NA  NGV   F+  +SD F  V+ ++DVIVS
Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARLNGVFVDFE--RSDLFEHVDEMYDVIVS 181

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +
Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPHGRLLFEIGCD 241

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V ++ +      V+  KD  GNDRV+
Sbjct: 242 QGRQVSQMMQFAGFSDVHVIKDLAGNDRVV 271


>gi|187925495|ref|YP_001897137.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phytofirmans PsJN]
 gi|187716689|gb|ACD17913.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phytofirmans PsJN]
          Length = 286

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 135/262 (51%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D  LD +  +R+    A  R +  E + +++G R+F+ +
Sbjct: 25  EARILLTHVLGWRPTQLITRSDEALDGKLVERYQTLEA--RRVAGEPVAQLVGAREFFGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLVD+AL+     +E     R+LDLGTGTGA+ +A+    P  +
Sbjct: 83  DFEVTPHVLIPRPETELLVDTALSA----LENLVRPRVLDLGTGTGAIAVAIASMRPDAR 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S +AL +A  NA     ++R        QSDW+ S++    FDVIVSNPPYI S
Sbjct: 139 VWALDRSAEALAVATRNAARLLDAQRPGGAVVLTQSDWYDSLDAALRFDVIVSNPPYIAS 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  R I  G    L  DG+  +E GY+Q   V  
Sbjct: 199 GDPHLYEGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAADGVLWIEHGYDQAEAVRA 257

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  ++    V + +D  G +R+
Sbjct: 258 LLTAQGFAQVRSERDLAGIERI 279


>gi|156933677|ref|YP_001437593.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter sakazakii ATCC BAA-894]
 gi|156531931|gb|ABU76757.1| hypothetical protein ESA_01499 [Cronobacter sakazakii ATCC BAA-894]
          Length = 285

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 134/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L D +   L   + R    E +  ++G R+F+++ 
Sbjct: 22  RDAEILLAFVTGRTRTFILAFGETALTDDEHERLDALLARRAAGEPVAYLIGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         ILDLGTGTGA+ LAL  E P    
Sbjct: 82  LEVSPATLIPRPDTECLVEQALA-RLPATP----CCILDLGTGTGAIALALASERPDCHV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             +D+  +A+ +AK NA   G+ +    LQS WFS++  + F +IVSNPPYI+       
Sbjct: 137 TALDVIPEAVALAKRNAQRLGI-DNVTILQSHWFSALTDVRFSLIVSNPPYIDGDDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L     GL+   T+     R L  +G   +E G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPKSALVADDAGLADLETLVTEARRFLEDNGWLMLEHGWQQGEAVRELFTRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YQAVETCRDYGGNERLTL 272


>gi|291524541|emb|CBK90128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium rectale DSM 17629]
          Length = 283

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I+G ++F  ++  ++S+   PR +TE LV+ AL    P +      R+LD+ TG+G 
Sbjct: 70  LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++LK +    G   DIS +AL +AK NA  NGV   F+  +SD F  V+ ++DVIVS
Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARLNGVFVDFE--RSDLFEHVDEMYDVIVS 181

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +
Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCD 241

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V  + +      V+  KD  GNDRV+
Sbjct: 242 QGRQVSEMMQFAGFSDVHVIKDLAGNDRVV 271


>gi|238923859|ref|YP_002937375.1| putative rRNA or tRNA methylase [Eubacterium rectale ATCC 33656]
 gi|238875534|gb|ACR75241.1| predicted rRNA or tRNA methylase [Eubacterium rectale ATCC 33656]
          Length = 283

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 8/210 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I+G ++F  ++  ++S+   PR +TE LV+ AL    P +      R+LD+ TG+G 
Sbjct: 70  LQYIVGEQEFMGLKFRVNSNVLIPRQDTETLVEEALKVIEPGM------RVLDMCTGSGC 123

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++LK +    G   DIS +AL +AK NA  NGV   F+  +SD F  V+ ++DVIVS
Sbjct: 124 IIISILKNTTNVDGAACDISKQALNVAKENARINGVFVDFE--RSDLFEHVDEMYDVIVS 181

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +
Sbjct: 182 NPPYIRSDEIPHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCD 241

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V  + +      V+  KD  GNDRV+
Sbjct: 242 QGRQVSEMMQFAGFSDVHVIKDLAGNDRVV 271


>gi|294635784|ref|ZP_06714244.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC
           23685]
 gi|291090884|gb|EFE23445.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC
           23685]
          Length = 278

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 137/260 (52%), Gaps = 12/260 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  V+G     ++   ++ L   Q   L   + R  + E +  ++G R+F+++ 
Sbjct: 23  RDAEILLEHVSGKGRSFILAFGETRLTAAQLERLAALLARREQGEPVAYLIGQREFWSLA 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL     R+  R   +I+DLGTGTGA+ LAL  E P  + 
Sbjct: 83  LEVSPATLIPRPDTECLVEQALQ----RLPARP-AQIVDLGTGTGAIALALASERPDCRV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             V+ + +A+ +A+ NA   G++ R + LQ  WF+ + G  FD+IV+NPPYI++   D  
Sbjct: 138 SAVEFNPEAVALARRNAERLGLA-RVEILQGSWFAPLAGRRFDMIVANPPYIDA---DDA 193

Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L + D  F+P  +L     GL+  R IA     +L  +G   +E G+ Q   V  +   
Sbjct: 194 HLSLGDVRFEPASALVAAEQGLADLRIIASQAPHYLAAEGWLLLEHGWQQGAAVRALLND 253

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V + +DYG N+RV L
Sbjct: 254 VGFSRVESVRDYGDNERVTL 273


>gi|227486770|ref|ZP_03917086.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227235240|gb|EEI85255.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 264

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 12/253 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  + G S   ++++ +  L+  Q   L + I +      +   +G  +FY++RL +   
Sbjct: 18  LTYILGKSKSYILMNQNLELNSEQNQRLNDIINKRKVSYPLQYAIGQWEFYDLRLKVDER 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVD 128
              PR ETE++VD  +   + +       +ILD+GTGTGA+ LAL K  E+ F   +G D
Sbjct: 78  ALIPRFETEIIVDYLIKSPMKK------EKILDIGTGTGAIALALAKNIENSFV--IGSD 129

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           I  +AL +A+ N V  G ++  D ++SD F  + G +D+I+SNPPYI+    + L  E+ 
Sbjct: 130 IEDRALSLARENKVFTG-TKNVDFIKSDLFKDISGAYDLIISNPPYIDKKDYESLEKELY 188

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P+ +L GG DGL  YR I      +L + G    EIGYNQK  + ++  ++    + 
Sbjct: 189 -FEPKSALYGGEDGLDFYREIIKNAGAYLCEGGHLVFEIGYNQKDILNKLLVNQGFVNIE 247

Query: 249 AFKDYGGNDRVLL 261
             KD+   DR ++
Sbjct: 248 NIKDFNDFDRFII 260


>gi|108759552|ref|YP_633065.1| putative protein methyltransferase HemK [Myxococcus xanthus DK
           1622]
 gi|108463432|gb|ABF88617.1| putative protein methyltransferase HemK [Myxococcus xanthus DK
           1622]
          Length = 293

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V  LS  ++ VD D  L   +       I R +  E    + G R+FYN    + +
Sbjct: 34  LLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFKVDA 93

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PRPETELLV++AL     R+  +D   R LD+ TG+G + ++L  E P    +  D
Sbjct: 94  RVLIPRPETELLVEAAL-----RMLPKDAPGRALDVCTGSGCIAISLAAERPQATVIATD 148

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLE 186
           +S  A  +A+ NA   GV++R   LQ D F+ V     F V+VSNPPYI S  +  L  E
Sbjct: 149 LSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLSAE 208

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           VR  +P ++LDGG DGL   R +  G  + L   GL ++EIG +Q   V+ +  +     
Sbjct: 209 VRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGYAD 267

Query: 247 VNAFKDYGGNDRV 259
               KD    +R+
Sbjct: 268 ARVEKDLERRERM 280


>gi|153948102|ref|YP_001401038.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 31758]
 gi|152959597|gb|ABS47058.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
           31758]
          Length = 276

 Score =  128 bits (322), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++SS T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E      
Sbjct: 82  LSVSSATLIPRPDTECLVEQALA-RLPSMP----CRILDLGTGTGAIALALASERRDCAV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++       
Sbjct: 137 IAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHLNE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR ++P   L    +G++    I      +L   G   +E G+ Q   V    ++   
Sbjct: 196 GDVR-YEPHSVLVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNSGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   KDYG NDRV L
Sbjct: 255 SAVMTCKDYGNNDRVTL 271


>gi|313889399|ref|ZP_07823047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122231|gb|EFR45322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 276

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 122/215 (56%), Gaps = 12/215 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   I G   F  + LT++     PRPETE LV+  LA +     KR  +++LD+GTG+G
Sbjct: 67  SPQYITGKAYFRELILTVNESVLIPRPETEELVELILAEN-----KRHDLQLLDIGTGSG 121

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ ++L KE P +K    DIS +ALE+A+ NA+ NG    F   QSD FSS+ G FD+IV
Sbjct: 122 AIAISLKKERPSWKVTASDISLEALEVAQINALKNGTDIMFS--QSDLFSSLSGKFDIIV 179

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI     + +G  V   +P ++L    +GL+ YR+I +   ++L+  G    EIGY
Sbjct: 180 SNPPYIAFADKEEVGRNVLASEPHLALFAEEEGLAIYRSILEQAEQYLSPQGKLYFEIGY 239

Query: 230 NQK---VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            Q     D+V+     K F +   +D  G DR+++
Sbjct: 240 KQGQALFDLVKTNFPEKRFRLK--QDCYGKDRMVI 272


>gi|223935327|ref|ZP_03627245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [bacterium Ellin514]
 gi|223896211|gb|EEF62654.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [bacterium Ellin514]
          Length = 289

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGT 106
           E +  ILG   F  +   ++     PRPETELL +    F  SLP      V   LD GT
Sbjct: 70  EPLQHILGSTCFCGLEFEVNPKVLIPRPETELLAELGWQFLNSLPSSPTPPVA--LDYGT 127

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GL- 164
           G+G + + +  +SP  +   +DIS  AL  A+ NA T+ +  R      D F++V  GL 
Sbjct: 128 GSGCLAVTVAAKSPTAQLHALDISPDALATAQKNAATHQMGSRIQFHLGDGFAAVPPGLQ 187

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F++I+SNPPYI S  +  L  EVRD DPR++LDGG DGL  YR +A   +  L  +G   
Sbjct: 188 FNLIISNPPYIASDEIATLQPEVRDHDPRLALDGGRDGLDFYRRLAKEAAPRLLPNGKIM 247

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +E G  Q   + ++FE  K  +     DY G  R+L+
Sbjct: 248 LEFGEGQAEAIQKLFEDEKWVVEGVKADYSGRLRILI 284


>gi|300172697|ref|YP_003771862.1| protein methyltransferase prmC [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887075|emb|CBL91043.1| Protein methyltransferase prmC [Leuconostoc gasicomitatum LMG
           18811]
          Length = 335

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 123/221 (55%), Gaps = 5/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + + + +E +  ILG   FY     + S    PRPETE LV+  L  +  +  K   V +
Sbjct: 113 LAKLMNNEPVQYILGHAPFYGREFMVDSRVLIPRPETEQLVEWILKDAGSKNGKP--VSV 170

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTGTGA+   L+ E+P  +G   DIS  AL +A+ NA   G++     +QSD +S+V
Sbjct: 171 LDIGTGTGAIIETLMLENPRVRGFAADISSGALAVAEMNAQRFGLN-YLHLVQSDVYSAV 229

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           EGL FD+IVSNPPYI +   D +   V +++P  +L    DGL+ Y  IA  ++ +L+ +
Sbjct: 230 EGLEFDIIVSNPPYIATTDEDEMADNVLEYEPHTALFADHDGLAIYEKIAADLALYLSDN 289

Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260
           G    EIGY Q   VV + + +     V   KD+ G DR++
Sbjct: 290 GRAYFEIGYKQGQQVVSMMQHALPQAEVTLKKDFSGLDRMV 330


>gi|241763795|ref|ZP_04761841.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
 gi|241366927|gb|EER61332.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
          Length = 284

 Score =  128 bits (321), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 120/234 (51%), Gaps = 6/234 (2%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           D D++  + Q  FL     R    E +  + G ++FY + L + +   +PRP+TE LVD 
Sbjct: 47  DTDALAPEVQAQFL-GLCQRRAAGEPVAYLTGRKEFYGLPLCVDARVLDPRPDTETLVDW 105

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL    P  + +   RI+DLGTG+GA+ LAL  + P  + +GVD S  AL +A++NA   
Sbjct: 106 ALEVIAPLSDPQHPPRIVDLGTGSGAIALALQHQRPTAEVLGVDASPDALAVAQANAQRL 165

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            +  +F  +QS W + V+G+FD IVSNPPYI +       L     +P  +L  G DGL 
Sbjct: 166 VLPVQF--VQSHWLTGVDGVFDAIVSNPPYIPAHDPHLAALT---HEPLQALASGADGLQ 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             R I     RHL   G   +E G++Q   V  +  ++    V +  D  G  R
Sbjct: 221 DIRQIVVQAPRHLKPGGWLLLEHGHDQAGAVSALLRAQGFAQVQSRNDLAGIAR 274


>gi|315127041|ref|YP_004069044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas sp. SM9913]
 gi|315015555|gb|ADT68893.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas sp. SM9913]
          Length = 279

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 126/239 (52%), Gaps = 16/239 (6%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L D Q      A  R L  E +  I G+R+F++++L ++  T  PRP+TE LV+ A
Sbjct: 46  PEKQLTDEQSQAFERACERRLNGEPVSHITGYREFWSLQLEVNPTTLIPRPDTETLVELA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----A 141
           L+ ++P     +  ++LDLGTGTGA+ LAL  E P +  + VD    A+ +AK N    A
Sbjct: 106 LSCNVP-----NDAKVLDLGTGTGAIALALGSEMPTWDIIAVDRIDDAVALAKRNQKRLA 160

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           + N   E     QS+WFS++    FD+IV+NPPYIE         +VR F+P  +L    
Sbjct: 161 INNVCVE-----QSNWFSALNNKKFDLIVTNPPYIEYNDKHLHQGDVR-FEPLSALVADD 214

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            GL+  + I      +L+ +G   +E G+ Q   V  IF       V+  KD G NDRV
Sbjct: 215 AGLADIKQIITQSRDYLHSNGYLLIEHGFEQSAAVRHIFNQMAFINVSTVKDLGNNDRV 273


>gi|313891849|ref|ZP_07825454.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dialister microaerophilus UPII 345-E]
 gi|313119843|gb|EFR43030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dialister microaerophilus UPII 345-E]
          Length = 288

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 123/219 (56%), Gaps = 10/219 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGT 108
           S+  ++G +DF   +  ++     PRP+TE  V+  +     +I K D+ + + D+G G+
Sbjct: 75  SVATLIGEKDFMGFKFFVNDKVLIPRPDTETWVEKVI-----QIHKNDIELFVADIGCGS 129

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFD 166
           GA+  + LK     KGVG+DIS  A+EI+K N     +  R +  + D+F++++    FD
Sbjct: 130 GAIICSFLKYCKNAKGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFD 189

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I SNPPYI +  +  L  EV++ +P I+LDGG DGL+ YR IA+   + LN  G  +VE
Sbjct: 190 GIFSNPPYIPTDDIKFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVE 248

Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           +G +Q + V  +FES   F      KDYG  +R +   R
Sbjct: 249 VGIHQSLIVKEMFESTGYFTDFEIIKDYGNIERAVYCIR 287


>gi|295095635|emb|CBK84725.1| [protein release factor]-glutamine N5-methyltransferase
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 276

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q+  L   + R    E +  ++  R+F+++ 
Sbjct: 22  RDAEILLEHVTGKARTYLLAFGETALTAEQQSQLEALLARRKTGEPVAHLVCEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S+ T  PRP+TE LV+ ALA  LP        +ILDLGTGTGA+ LAL  E P    
Sbjct: 82  LYVSAATLIPRPDTECLVEQALA-RLP----AQPCQILDLGTGTGAIALALASERPDCTV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A+ N    G++     LQS WF+++E  +F++IVSNPPYI+       
Sbjct: 137 TAVDVMPDAVALARRNVERLGLN-NVSVLQSSWFAALESRMFEMIVSNPPYIDEDDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+    I     +HL   G   VE G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPLTALVAANQGLADLDHIVTTSRQHLLPGGWLLVEHGWTQGEAVRALFTRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YAAVETCRDYGGNERLTL 272


>gi|304317930|ref|YP_003853075.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302779432|gb|ADL69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 277

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 143/263 (54%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNV 63
           +S + L    G S   ++++ D  L D    F     V  L+   +    I+G + F  +
Sbjct: 24  ESEALLSFTLGASKEYLLINRDKELTDDS--FNKYMEVLDLRKSGMPYQYIVGEKHFMGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S     PR +TE+LV+  L     R++  D V  LD+GTG+GA+ +++ K     K
Sbjct: 82  IFNVSPSVLIPRNDTEILVEEVLK----RLKSGDTV--LDIGTGSGAIAVSIAKYKDV-K 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVD 181
              VDIS  ALE+AK NA  NGVS++   ++SD FSS+ +G+ FD+IVSNPPYI S  ++
Sbjct: 135 VYAVDISDGALEVAKENADINGVSDKVIFIKSDLFSSIPDGIRFDLIVSNPPYIRSNEIN 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  +P+I+LDGG DGL+ YR I      ++   G+ + E+G++Q  DV  I   
Sbjct: 195 ELQEEVKR-EPKIALDGGEDGLTFYRRIVKDSVNYIKFGGIIAFEVGFDQAWDVKDILVD 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KD  G DRV+L  R
Sbjct: 254 GGYSDIEVVKDLQGIDRVVLGKR 276


>gi|329929004|ref|ZP_08282806.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. HGF5]
 gi|328936993|gb|EGG33422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. HGF5]
          Length = 296

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 10/244 (4%)

Query: 1   MQALRDSHSFLCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           M+  R++   L  V GLS    +  + DP     + +R  L  AI R  +      I+G 
Sbjct: 31  MEPQRNAQLLLEHVLGLSGTSYYMALTDP---FPEGRRLALEEAITRKAEGVPAQYIIGE 87

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL 116
           ++FY     ++     PRPETELLV++ L +      + D  ++++D+GTG+GA+ + L 
Sbjct: 88  QEFYGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPRPDGGLKVVDIGTGSGAIAITLA 147

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
            +S  +     DIS  ALE+A  NA   G   R +  Q +      G+  D++VSNPPYI
Sbjct: 148 LQSKGWDVFASDISSDALEVAARNAKKLGA--RVEFRQGNLLEPFAGMGPDILVSNPPYI 205

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  ++ L  EVRD++PR +LDGG DGL+ YR +   +S       L + E+G  Q  DV
Sbjct: 206 PAEDIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLSLLSAPPRLIAFELGMGQAGDV 265

Query: 236 VRIF 239
             + 
Sbjct: 266 AELL 269


>gi|324992932|gb|EGC24852.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK405]
 gi|325687438|gb|EGD29459.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK72]
          Length = 276

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +     +   + ILD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----RESSLSILDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ L L    P ++    D+S  AL +A  NA + G+S  F  +QSD F ++ G F
Sbjct: 118 TGSGAIALTLANSRPDWQITASDLSGDALSLATENAQSCGLSLTF--IQSDCFEAISGNF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    HL K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDRFGKDRMV 271


>gi|157145533|ref|YP_001452852.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter koseri ATCC BAA-895]
 gi|157082738|gb|ABV12416.1| hypothetical protein CKO_01276 [Citrobacter koseri ATCC BAA-895]
          Length = 277

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L D QR  L   + R  + E +  + G R+F+++ 
Sbjct: 22  RDAEILLGHVTGKARTFILAFGETALTDTQREQLAQLLARRQRGEPVAHLTGIREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----DSPCRILDLGTGTGAIALALATERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQSDWF+++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAGRNAQHLAI-HNVRILQSDWFAALPGQQFDMIVSNPPYIDAHDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +G++    I       L   G   +E G+ Q V V        
Sbjct: 196 QGDVR-FEPLSALVADDNGMADITHIIAQARHALAPGGYLLLEHGWQQGVAVRTALAQAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YVQVETCRDYGDNERITL 272


>gi|303228389|ref|ZP_07315222.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516891|gb|EFL58800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 289

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 132/259 (50%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L  V G +   +  + D  L+  +       ++   K  S+  + G +DF  +  
Sbjct: 30  DGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGYSVASLTGTKDFMGLTF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TE LV+    + L    ++D +RILD+ TG G + L+LL   P   G+
Sbjct: 90  AVNDKVLIPRPDTETLVE----YVLSTYHQQDAIRILDMCTGPGTILLSLLHYLPTATGM 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182
           G+DIS  ALEIA  N     +  R +  +SD FS +E    LFDVIVSNPPYI       
Sbjct: 146 GLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLEDKKI 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V + +P I+L GG DGL  YR +A     +L   GL + E+GY+Q  DV  + ES 
Sbjct: 206 LSPDVLN-EPHIALFGGEDGLDFYRQLAMECVTYLKPYGLVAFEVGYDQAEDVKSLLESV 264

Query: 243 KLFLVNAF-KDYGGNDRVL 260
             ++  +F  D  G +RV+
Sbjct: 265 GSYVDISFAADLAGINRVV 283


>gi|262375290|ref|ZP_06068523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter lwoffii SH145]
 gi|262309544|gb|EEY90674.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter lwoffii SH145]
          Length = 272

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 10/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  +T + S  +++  D  L   Q     + + R    E +  + G + F+ + 
Sbjct: 19  QENAWLLEHITKIDSFDLLMKKDQELTPEQEQAYKDGLARIAAGEPLAYVTGSQPFWTLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ DT  PRP+TE+LV++ L   LP     +  R++DLGTGTGA+ L+L  E   +  
Sbjct: 79  LKVTKDTLVPRPDTEVLVETVLKLDLP-----EDARVVDLGTGTGAIALSLASERSNWTV 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
              DI    LE+AK NA  + + E  + +   W        FD IVSNPPYI++   D +
Sbjct: 134 TASDIYEPTLEVAKYNAEQHDI-ENVEFVLGSWLKPFGRQFFDAIVSNPPYIDA---DDV 189

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            ++    +P  +L     GL+    I     +HL  +G   +E GYNQ   V  +F+   
Sbjct: 190 HMQNLATEPERALVADKKGLADIEMIILQAKKHLTVNGWVVLEHGYNQADAVQHLFKQAG 249

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KDYGGNDRV L
Sbjct: 250 YKQVRTVKDYGGNDRVTL 267


>gi|239617253|ref|YP_002940575.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1]
 gi|239506084|gb|ACR79571.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1]
          Length = 282

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + + L  +  +  H+V VD  + +D +    L +A+ R    E +  I+GW+ F   +L 
Sbjct: 26  TFTLLESIAMIEKHKVFVDTATEIDTKTCKLLFDAVKRLKAGEPLDYIIGWKYFLGAKLN 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L S    PRPETE LV+  +       + ++V    D+GTG+GA+ +AL K  P  K   
Sbjct: 86  LDSRVLIPRPETEELVEMIIN----EHKGKNVKAFADVGTGSGAIAIALAKHFPASKIYA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCL 183
            DIS  ALE+A  NA  NGV  R   L     + +E   D   +IVSNPPY+++ +++ L
Sbjct: 142 TDISKPALELAFENAKINGVEGRIAFLHGKNLNPLEAYMDEIEIIVSNPPYVKTTVLESL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYR 207
              V+D++P I+LDGG DG++ +R
Sbjct: 202 DKRVKDYEPIIALDGGEDGMNFFR 225


>gi|317153067|ref|YP_004121115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943318|gb|ADU62369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 284

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 132/264 (50%), Gaps = 12/264 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V GL+   + ++ D  L   +   + +   R    E +  +LG R+FY +  +
Sbjct: 26  AQVLVAEVLGLTRLGLSLERDRALTPEETDRIRSLAARRASGEPLAYLLGRREFYGLDFS 85

Query: 67  LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           ++ D   PRPETE ++++ L AFS         VR  DLGTG+G + + L    P   G+
Sbjct: 86  VTPDVLIPRPETEHVIEAVLNAFS-----PDTPVRFADLGTGSGILAVTLAHCFPHATGL 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
            VD+S  AL +A+ NA  +GV +R   +Q D+   +  +G FD+IVSNPPY+     +  
Sbjct: 141 AVDLSGPALAVARRNARAHGVHDRIAFVQGDFTGPILGKGRFDLIVSNPPYVTDEEFERA 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV  F+PR +L  G DGL H R +       L   GL  +EIG  Q V+ V I  S +
Sbjct: 201 SREVTGFEPRTALVSGPDGLDHIRAMLPRALEALRPGGLLLMEIGCGQ-VEGVNIITSNQ 259

Query: 244 LFL---VNAFKDYGGNDRVLLFCR 264
                 V   KD  G+DRV+   R
Sbjct: 260 CLESRDVGVIKDLAGHDRVVSMRR 283


>gi|227328866|ref|ZP_03832890.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 281

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L+  ++  LT  + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKARTFLLAFGETELNAAEQQQLTELLARREQGEPIAYLIGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP+        +LDLGTGTGA+ LAL  E    + 
Sbjct: 82  LAVSPATLIPRPDTECLVEQAL-LRLPQTP----CAVLDLGTGTGAIALALASERRDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
            GVD+   A+ +A  NA   G+ +    L   W+S ++   F +I SNPPYI++  V   
Sbjct: 137 TGVDVQPDAVALATKNAQQLGL-DNASFLSGSWYSPLDHTRFALIASNPPYIDADDVHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  RTI +    +L+      +E G+ Q   V ++ ++R 
Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDGAWLLLEHGWQQADMVRQLLQARG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              +   +DYGGNDRV L
Sbjct: 255 FTQIETCQDYGGNDRVSL 272


>gi|160940108|ref|ZP_02087453.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436688|gb|EDP14455.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC
           BAA-613]
          Length = 285

 Score =  128 bits (321), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 118/214 (55%), Gaps = 9/214 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G ++F      ++     PR +TE LV+  L     R EKR    +LD+ TG+G 
Sbjct: 73  LQHLTGTQEFMGFEFLVNEHVLIPRQDTETLVELVLEEQNDR-EKR----VLDMCTGSGC 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEG--LFD 166
           + ++L     +     +D+S +AL++A  N   +  G    F+  +S+ FS++E    FD
Sbjct: 128 IAISLALMGRYRHVAALDVSAEALKVAAGNRDRLLGGYEGGFELFESNMFSALETDRTFD 187

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           VIVSNPPYI S +++ L  EVRD +PRI+LDG  DGL+ YR +A+    HL + G   +E
Sbjct: 188 VIVSNPPYIPSRVIEGLAPEVRDHEPRIALDGSDDGLTFYRILAEEARNHLAEGGSIYME 247

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           IGY+Q   V  +F S     V  F+D  G DRV+
Sbjct: 248 IGYDQSEAVEGLFRSGGYRDVRTFQDLAGQDRVV 281


>gi|329113398|ref|ZP_08242179.1| Bifunctional methyltransferase [Acetobacter pomorum DM001]
 gi|326697223|gb|EGE48883.1| Bifunctional methyltransferase [Acetobacter pomorum DM001]
          Length = 292

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 137/260 (52%), Gaps = 7/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++   L     L+  Q++    +     + FF  + + R   HE    I G + F+++ 
Sbjct: 34  REARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVKRRAAHEPFAYITGSKGFWSLD 91

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  +  PR +TE L+ S L +   R ++  V  ILDLGTGTG + LA L E P  +G
Sbjct: 92  LAVSPASLVPRGDTETLITSLLEY---RPDQTSVQNILDLGTGTGCLLLAALAEYPKARG 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           VGVDI+ +A  +A +NA   G+ +    + ++W +++     FDV++SNPPYI +  +  
Sbjct: 149 VGVDINPQAAMLAHANAQRCGMQDHALFIAAEWDAALAPNARFDVVLSNPPYIPTSDLAD 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ +P  +LDGG DGLS YR +   +   L   G+  +EIG  Q+  +  +  + 
Sbjct: 209 LMREVREHEPVRALDGGNDGLSAYRYLCGRLPFLLVDGGVAVLEIGIGQEEALRALAATN 268

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            L +V+   D  G  R ++ 
Sbjct: 269 ALRVVDVKADLAGIARAVVL 288


>gi|154498436|ref|ZP_02036814.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC
           29799]
 gi|150272504|gb|EDM99689.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC
           29799]
          Length = 287

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 6/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +C   G +  Q + D      D     +   + R L+ E +  ++G  +FY + L
Sbjct: 27  EARELVCFAAGKNREQFLRDMSLYASDEVEAKVAELMNRRLEGEPVAYLIGEWEFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S D   PR +TE+L + A+   L      +  R+LDL  G+G V LA+   +P  + V
Sbjct: 87  DISRDVLIPRADTEVLAEQAI---LAARAAGEGARVLDLCAGSGCVGLAVAANAPQCRTV 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDC 182
             D+S +AL+I + N   N ++ R   +Q+D     SSV   FDVI SNPPYI +  +D 
Sbjct: 144 LADVSEEALKICRQNIRRNDLNARVTCVQADARQAPSSVLWDFDVIASNPPYIPTRDIDG 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   VRD++P ++LDGG DGL  YR IA+     L   G+   E+G  Q  DV +I    
Sbjct: 204 LDSSVRDYEPHLALDGGDDGLDFYRDIAEKWRTALRLGGVLLFEVGIGQAADVEQILARC 263

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +  F+D GG  RV+
Sbjct: 264 GYEDIETFQDTGGIWRVV 281


>gi|260914190|ref|ZP_05920663.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325]
 gi|260631823|gb|EEX50001.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325]
          Length = 308

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 132/267 (49%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  +   ++  P++ L   +   L   + R  K E I  ILG ++F+++ L
Sbjct: 38  DAMVLLSEVTQKTRAYILAFPETHLSADKLKQLEKYLTRRAKGEPIAYILGEKEFWSLPL 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLALLKESPFF 122
            +S  T  PRP+TE+LV+ AL  +  R+        + ILDLGTGTGA+ LAL  E    
Sbjct: 98  KVSKHTLIPRPDTEILVEQALEIAKQRLNSSYFSGELTILDLGTGTGAIALALASELKML 157

Query: 123 KG--------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172
                     + VD   +A+E+A+ NA  N +   F  LQS WF +++    FDVIVSNP
Sbjct: 158 TQKCGANLNILAVDRIAEAVELARENAKYNHLEVTF--LQSSWFDALDPSIKFDVIVSNP 215

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+         +VR F+P  +L    +G +  R I +   + L   G   +E G+ Q 
Sbjct: 216 PYIDEKDSHLTQGDVR-FEPLSALVAEEEGYADLRHIIEQAPQFLKPQGYLLLEHGWLQG 274

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             V  IF       V   KDYG N+RV
Sbjct: 275 EKVRSIFTENNWQQVQTLKDYGNNERV 301


>gi|254244444|ref|ZP_04937766.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192]
 gi|126197822|gb|EAZ61885.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192]
          Length = 276

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 120/221 (54%), Gaps = 8/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  ILG + F+++ L ++  T  PRP+TELLV++ALA         D   +
Sbjct: 58  IARRRNGEPVAYILGHQGFWSLDLEVAPHTLIPRPDTELLVETALA-----TLTADTATV 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTGA+ LAL  E P +    VD   +A+ +A+ N     + E  +  +S WFS++
Sbjct: 113 LDLGTGTGAIALALASERPLWTVTAVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSAL 171

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +G  F +IV NPPYI +        +VR F+P+ +L  G DGL   R I     +HL  +
Sbjct: 172 DGRRFRMIVGNPPYIPASDPHLSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDE 230

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E GY+Q   V  +  +R    V+  +D GGN+R+ L
Sbjct: 231 GWLLLEHGYDQGAAVRELLGARGFAGVHTLRDLGGNERITL 271


>gi|225175857|ref|ZP_03729850.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168781|gb|EEG77582.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dethiobacter alkaliphilus AHT 1]
          Length = 283

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 5/257 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++   L  + G  +  +       L   Q       + R    E    + G ++F  + 
Sbjct: 26  REAQFLLTALLGCDAAWLYAHDQEKLTAPQWAEFQAWLARRATGEPFAYLAGQKEFMGLC 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++ D   PRPETE LV++        ++     RIL++G G+GAV ++L K  P  + 
Sbjct: 86  FAVTPDVLIPRPETEFLVEAVAE----ELQAHTSPRILEIGAGSGAVAVSLAKLLPKARV 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           V VD+S  ALEIA+ NA  +GV+ R + L  D ++ V +  FD +VSNPPYI +  +  L
Sbjct: 142 VAVDVSQAALEIAQKNAARHGVAGRVEFLAGDLYAPVADEYFDAVVSNPPYISAADILKL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V+DF+PR++L GG DGL  YR +   +    N+  + + E+G  Q   V  +     
Sbjct: 202 QCDVKDFEPRLALCGGEDGLDFYRRLTGELDVLSNRPKMLAFEVGMGQAQAVAALCLKAG 261

Query: 244 LFLVNAFKDYGGNDRVL 260
                  KD  G DR++
Sbjct: 262 YENTRQIKDLAGIDRII 278


>gi|15604677|ref|NP_221195.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia prowazekii str. Madrid E]
 gi|6225501|sp|Q9ZCB3|HEMK_RICPR RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; AltName: Full=M.RprHemKP;
           Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|3861372|emb|CAA15271.1| POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia prowazekii]
 gi|292572508|gb|ADE30423.1| Methylase of polypeptide chain release factors [Rickettsia
           prowazekii Rp22]
          Length = 518

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 134/266 (50%), Gaps = 15/266 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VT      +++  +  L + +       + R L HE I  I+G ++FY+    ++ 
Sbjct: 31  LLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSREFIVNK 90

Query: 70  DTFEPRPETELLVDSALAFSLPR--------IEKRDVV------RILDLGTGTGAVCLAL 115
               PR +TE+LVD  +   + R        ++  D V       IL+LGTG+G + ++L
Sbjct: 91  HVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGCIAISL 150

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
           L E P    +  DIS  A+++AKSN++   V++R   + S+WF  ++   FD IVSNPPY
Sbjct: 151 LCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIVSNPPY 210

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I       + +E  +++P I+L    DGL  Y  IA    + L  +G   +EIG++Q   
Sbjct: 211 ISHTEKLKMAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGFSQAAK 270

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           V +IF +    +   ++D   ++RV+
Sbjct: 271 VSKIFLNYGYNIDYIYRDLQSHNRVI 296


>gi|270157831|ref|ZP_06186488.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae
           D-4968]
 gi|289163903|ref|YP_003454041.1| methyltransferase HemK [Legionella longbeachae NSW150]
 gi|269989856|gb|EEZ96110.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae
           D-4968]
 gi|288857076|emb|CBJ10891.1| putative methyltransferase HemK [Legionella longbeachae NSW150]
          Length = 268

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++   L  V   +   +   P+++L  +Q     + + +  K   I  ++G R+F+++ 
Sbjct: 14  REAEILLGHVLDKTRAYLFAHPETLLTPKQLAAFEHLMAQRAKGIPIAYLMGQREFWSLD 73

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PR ETELLV  AL F    I  +    IL+LGTG+GA+ LAL KE P ++ 
Sbjct: 74  LKVNEHTLIPRHETELLVALALEF----IPDQPDTHILELGTGSGAIALALAKERPSWRI 129

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           V  DIS  AL++AK NA  N + E  +   SDWFS + +  +  IV+NPPYI     D  
Sbjct: 130 VACDISEDALKVAKENAQNNKI-ENINFFLSDWFSGIPQRQYHAIVTNPPYIAE---DDP 185

Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L+  D  F+PR +L    +GL+  + I +    +L   G+  +E G++QK  V  I   
Sbjct: 186 HLQQGDLRFEPRNALVSSQEGLADLQCIIEHGYEYLLPQGMLLLEHGFDQKSKVQAILNR 245

Query: 242 RKLFLVNAFKDYGGNDRV 259
            +   +  ++D  G+DRV
Sbjct: 246 LRYKSIRCWQDIQGHDRV 263


>gi|238895294|ref|YP_002920029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238547611|dbj|BAH63962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 282

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA    ++      QSDWFS++ G  F  IVSNPPYI++      
Sbjct: 137 TAVDVMPDAVALALRNAEHLSIAN-VTISQSDWFSALAGQRFATIVSNPPYIDAADPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YLDVATCRDYGDNERLTL 272


>gi|152984205|ref|YP_001350645.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas aeruginosa PA7]
 gi|150959363|gb|ABR81388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas aeruginosa PA7]
          Length = 276

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +   P+ ++         + I R    E +  ILG + F+++ L
Sbjct: 22  DTELLLAAAMGKPRSFLRTWPERIVPREANELFDDWIARRRNGEPVAYILGHQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +   
Sbjct: 82  EVAPHTLIPRPDTELLVETALA-----TLAADSATVLDLGTGTGAIALALASERPLWTVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +A+ N     + E  +   S WFS+++G  F +IV NPPYI +       
Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVCHSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   R I +   R+L  +G   +E GY+Q   V  +  +R  
Sbjct: 196 GDVR-FEPKSALVAGNDGLDDIRQIVEQAPRYLLAEGWLLLEHGYDQGAAVRDLLGARGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +D GGN+R+ L
Sbjct: 255 AGVRTLRDLGGNERITL 271


>gi|120601500|ref|YP_965900.1| HemK family modification methylase [Desulfovibrio vulgaris DP4]
 gi|120561729|gb|ABM27473.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfovibrio vulgaris DP4]
          Length = 295

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 10/259 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC    L    +++ PD ++++      +  + R    E +  I+G ++F+     ++ 
Sbjct: 37  ILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFAVNP 96

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRPETE L+++AL  SL    +    R +D GTG+G + + L  E     G+ +D+
Sbjct: 97  STLIPRPETEHLIETALE-SL----RSGPARFVDAGTGSGCIAVTLCAERADLSGLALDM 151

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL  A  NA  +GV++R   ++ D+ +S+   G  D+  SNPPYI       L  EV
Sbjct: 152 SAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISKAEYTGLSREV 211

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245
           RDF+PR +L  G  GL H   I    +R L   G+  +E G  Q  D+  +F        
Sbjct: 212 RDFEPRSALVPGDTGLEHATAIIAEATRVLRPHGILLMEFGCTQGADMASLFTPYSTLWE 271

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +V   +D  G DR  +F R
Sbjct: 272 MVEVRRDLAGLDR-FIFAR 289


>gi|306820961|ref|ZP_07454581.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551075|gb|EFM39046.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 279

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 8/241 (3%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +D    LDD Q+  L    V+ LK H+ IH I+G RDFY     +      PR +TE+LV
Sbjct: 43  LDEKIALDDEQQIKL---FVQQLKNHKPIHYIIGQRDFYGYDFLVDEHVLIPRSDTEILV 99

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++A+     + +    + I   G G+G + + LLK+        VDI+  A++I+K NA 
Sbjct: 100 ENAVNLLKNKKKDLKGLEI---GVGSGIISITLLKKLKNLSMTAVDINDYAIDISKKNAE 156

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             GVS+R   ++SD F +V G +D I+SNPPYI+   +  L  +V++++P  +LDG  +G
Sbjct: 157 NLGVSDRLKLIKSDLFENVIGKYDFIISNPPYIDEKDMADLPEKVKNYEPYSALDGKKNG 216

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
           +  Y  I       LN       EIGYNQ   +   FE+      V   +DYG NDRV +
Sbjct: 217 MYFYNEIIKSGRTFLNDKFHIFFEIGYNQGEMIRHSFENCGYEADVKIIQDYGKNDRVAI 276

Query: 262 F 262
           +
Sbjct: 277 Y 277


>gi|238651092|ref|YP_002916950.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia peacockii str. Rustic]
 gi|238625190|gb|ACR47896.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia peacockii str. Rustic]
          Length = 524

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 21/262 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++++ D  L++ +       + R LKHE I  I G ++FY+    ++     PR +TE+L
Sbjct: 43  LLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYSREFIVNKHVLIPRSDTEVL 102

Query: 82  VDSALAFSL-----PRIEKRD---------------VVRILDLGTGTGAVCLALLKESPF 121
           VD            P  ++ D                + IL+LGTG+G + ++LL E   
Sbjct: 103 VDVVFQCHSRESGNPEKKQPDPCFRGNDISENCNDKFLNILELGTGSGCIAISLLCELQN 162

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              +  DIS  A++I KSNA    V++R   + S+WF ++E   FD IVSNPPYI     
Sbjct: 163 ANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIETQKFDFIVSNPPYIAHSEK 222

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             + +E  +++P I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+  V +IF 
Sbjct: 223 SEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNGKIILEIGFKQEEAVTQIFL 282

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                + + +KD  G+ RV+L 
Sbjct: 283 DHGYNIESVYKDLQGHSRVILL 304


>gi|145298194|ref|YP_001141035.1| protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850966|gb|ABO89287.1| Protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 289

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 127/267 (47%), Gaps = 12/267 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC +       ++  P+  LD  Q+  L   + R L  E I  ++G R+F+++ L
Sbjct: 23  DADVLLCHLLDCRRSYLMTWPERELDAAQQDRLQGWLTRRLAGEPIAHLVGEREFWSLPL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE+LV+ ALA   P+    D     +LDLGTGTGA+ LAL  E P   
Sbjct: 83  KVSPATLIPRPDTEVLVEQALARLPPKPASPDQAPCALLDLGTGTGAIALALKSERPDAD 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIE 176
              VD   +A  +A+ N+   G+          WF        S    F +IVSNPPYI+
Sbjct: 143 VWAVDRMPEAAALARDNSAALGLP--ITVRDGSWFEPLCDPLLSQAPRFAMIVSNPPYID 200

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+PR +L     GL+  R I  G   HL   G   +E G+ Q   V 
Sbjct: 201 GADPHLNKGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLCPGGWLLLEHGWQQGEAVR 259

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++   +    V   +DYG N+RV L C
Sbjct: 260 QLLLQQGFSRVETVRDYGDNERVTLGC 286


>gi|303230838|ref|ZP_07317585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514598|gb|EFL56593.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 289

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 124/239 (51%), Gaps = 8/239 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L  V G +   +  + D  L+  +       ++   K  S+  + G +DF  +  
Sbjct: 30  DGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGHSVASLTGTKDFMGLTF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TE LV+    + L    ++D +RILD+ TG G + L+LL   P   G+
Sbjct: 90  AVNDKVLIPRPDTETLVE----YVLSSYHQQDSIRILDMCTGPGTILLSLLHYLPTATGM 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDC 182
           G+DIS  ALEIA  N     +  R +  +SD FS +E    LFDVIVSNPPYI     + 
Sbjct: 146 GLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLEDKEI 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           L  +V + +P I+L GG DGL  YR +A    ++L   GL + E+GY+Q  DV  + E+
Sbjct: 206 LSPDVLN-EPHIALFGGEDGLDFYRHLAMECVKYLKPYGLVAFEVGYDQAEDVKSLLEA 263


>gi|261343908|ref|ZP_05971553.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii
           DSM 4541]
 gi|282568294|gb|EFB73829.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii
           DSM 4541]
          Length = 277

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 136/261 (52%), Gaps = 10/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L   TG S   ++   ++ L   +   L   + R    E I  I+G R+F++
Sbjct: 20  AKRDAQILLQHATGRSRTYILAFDETELSAHELQQLEELLQRREFGEPIAYIVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL   LP  +     RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSPATLIPRPDTECLVEQAL-IRLPSTD----CRILDLGTGTGAIALALASERPNS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
             +GVD + +A+ +A+ N     + + RF   QSDWF+S+   LFD+IVSNPPYI+   +
Sbjct: 135 TVIGVDFNPEAVVLAERNQQRLSIFNVRFS--QSDWFTSLSNELFDMIVSNPPYIDEGDI 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L     GLS    I     R+L + G   +E G+ Q + V  +F 
Sbjct: 193 HLNQGDVR-FEPATALIAEEHGLSDLAHIIAESKRYLKQQGWLLLEHGWQQGLAVRELFS 251

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 +    DYGG DRV L
Sbjct: 252 ENGYTNIETCLDYGGKDRVSL 272


>gi|326796199|ref|YP_004314019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinomonas mediterranea MMB-1]
 gi|326546963|gb|ADZ92183.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinomonas mediterranea MMB-1]
          Length = 278

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 9/220 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  ++G +DF+ + L +S  T  PRP+TE LV+ AL   +  +EK +   ILD
Sbjct: 62  RRLVGEPIAYLIGKQDFWTLELDVSPTTLIPRPDTERLVEVALDL-IAGVEKPN---ILD 117

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           LGTGTGA+ LAL  E       G D   +A+E+A  NA  N +S  F  + SDWFS V  
Sbjct: 118 LGTGTGAIALALAYERKDALVSGADCVKQAVELATRNAEKNALSVNF--IHSDWFSEVPS 175

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +  F +IVSNPPYI+         +VR F+P  +L    +G+     I      +L+  G
Sbjct: 176 DNQFHLIVSNPPYIDPNDKHLSQGDVR-FEPDSALTADQEGMGDINRILSEAPHYLHDTG 234

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             + E GY+Q   V   F SR    V  F DYGGNDRV +
Sbjct: 235 WLAFEHGYDQGEKVRLAFASRGFLSVETFADYGGNDRVTI 274


>gi|260753917|ref|YP_003226810.1| modification methylase, HemK family [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553280|gb|ACV76226.1| modification methylase, HemK family [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 286

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 18/276 (6%)

Query: 2   QALRDSHSFLCRVTG--------LSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKH 48
           +ALR++   L  V+         L +H + ++ D++L     +         AI R  ++
Sbjct: 16  EALREAARDLATVSMTARLDAELLMAHSLGIERDALLLGSWGEKEAPLSFFEAIKRRKQN 75

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG+RDF+ +RLT++ D   PRP++E L+++A+A+   R +      ILDLGTG+
Sbjct: 76  EPVAYILGYRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGS 133

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           GA+ LA L E    KG+GVD S +A++IA+ NA   G   R +     W   ++  FD++
Sbjct: 134 GALLLAALDEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLL 193

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           + NPPYI    +  +  +V  ++P ++L  G +GL  YR I   +   L + G+  +EIG
Sbjct: 194 LCNPPYIARDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIG 251

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++Q  +V  I +   L     F D     R +L  R
Sbjct: 252 FDQAENVSMIAKETGL-RSRIFYDLEQRPRCVLLSR 286


>gi|299769518|ref|YP_003731544.1| methylase of polypeptide chain release factor [Acinetobacter sp.
           DR1]
 gi|298699606|gb|ADI90171.1| methylase of polypeptide chain release factor [Acinetobacter sp.
           DR1]
          Length = 271

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 113/216 (52%), Gaps = 10/216 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEILVETVLNLTLP-----NTANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           GA+ LAL  E P +     DI    LE+AK NA+ + + +R       WF ++E   FD+
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLEVAKENALAHNL-QRVKFACGAWFEALEPQKFDL 176

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E 
Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEH 233

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           GY+Q   V  IF       +   +DYG NDRV L C
Sbjct: 234 GYDQGQAVRNIFAEHGFSEIKTIQDYGQNDRVTLAC 269


>gi|320538899|ref|ZP_08038575.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Serratia symbiotica str. Tucson]
 gi|320031059|gb|EFW13062.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Serratia symbiotica str. Tucson]
          Length = 282

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 133/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q+  L   +VR  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGRARTFLLAFDETRLTPHQQQQLEALLVRREQGEPVAYLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++S  T  PRP++E LV    A +L R+       ILDLGTGTGA+ LAL  E P    
Sbjct: 82  LSVSPATLIPRPDSECLV----ALALERLPIASC-HILDLGTGTGAIALALASERPDCTV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
           +GVD+   AL +A+ NA    +S     LQ +WFSS+    F +I SNPPYI++      
Sbjct: 137 IGVDVQPDALALAQHNARKLTISN-VQFLQGNWFSSLAPQHFALIASNPPYIDADDAHLT 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+    I     +HL   G   +E G+ Q   V  +  +  
Sbjct: 196 QGDVR-FEPASALVAAQQGLADLDAIVRQAPQHLQPQGWLLLEHGWQQGRSVRALMLAAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V  ++DYG N+RV L
Sbjct: 255 FMAVATYRDYGNNERVTL 272


>gi|319939133|ref|ZP_08013497.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV]
 gi|319812183|gb|EFW08449.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV]
          Length = 276

 Score =  127 bits (319), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 118/217 (54%), Gaps = 8/217 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H     I+G  +F+     +      PRPETE LV+  L+ +     +   +++LD+G
Sbjct: 63  LVHRPAQYIIGNAEFHGHSFKVDERVLIPRPETEELVNLILSEN-----QNSSLKVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ L+L  E   ++    DIS  AL++A+ NA    V+   D +QSD F ++ G +
Sbjct: 118 TGSGAIALSLAAERANWQVTASDISQDALDLAQENAEAIDVA--IDFVQSDCFQAITGKY 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     + +GL V   +P ++L    DG + YR IA+   +HL + G   +
Sbjct: 176 DIIVSNPPYISETDREEVGLNVLASEPHLALFAEEDGYAVYRKIAENAQKHLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
           EIGY Q   V +IFES      +   +D  G DR+++
Sbjct: 236 EIGYKQGEHVKKIFESAFPKMRIRILQDQFGKDRMVV 272


>gi|297183484|gb|ADI19615.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF0770_37D02]
          Length = 282

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 130/256 (50%), Gaps = 5/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   ++V+    +  +      +AI R +K E I  I G ++F++   
Sbjct: 25  DAEIILSDIMGTSKEFLMVNNQINISKKTIKKYNSAIKRRIKKEPIAYITGKKEFWSQDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRPETELL+   + F      K   + +LD+GTG+G + L++LKE  F  G 
Sbjct: 85  AVNQATLVPRPETELLIYWVINFF-----KNRKINVLDIGTGSGCILLSILKELNFSTGT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+DIS KA++ A+ N+    V  R      D      G +D+IVSNPPYI S  +  L  
Sbjct: 140 GIDISAKAIKTARVNSKNLNVVYRSKFKVFDLSKFNIGKYDLIVSNPPYIPSKDIKNLSK 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++ + +P ++L GG DGL   + +    +  L ++GL ++EIGY Q   V  I +     
Sbjct: 200 DIINHEPLVALKGGFDGLDLIKKVIYKSNYLLKRNGLLAIEIGYRQYQKVSSILKKHGFR 259

Query: 246 LVNAFKDYGGNDRVLL 261
            +    D+  N R ++
Sbjct: 260 EIRKEYDFNHNVRCII 275


>gi|293609439|ref|ZP_06691741.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827891|gb|EFF86254.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 271

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 10/216 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLP-----NTANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           GA+ LAL  E P ++   +DI    LE+AK NA  + + +R       WF ++E   FD+
Sbjct: 118 GAIALALASERPDWQVTAIDIYAPTLEVAKENAQAHDL-QRVKFACGAWFDALEPQKFDL 176

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E 
Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEH 233

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           GY+Q   V  IF       +   +DYG NDRV L C
Sbjct: 234 GYDQGQAVRDIFTEHGFSEIKTIQDYGQNDRVTLAC 269


>gi|306833420|ref|ZP_07466547.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
           700338]
 gi|304424190|gb|EFM27329.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
           700338]
          Length = 276

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 14/244 (5%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           I+  +  + ++ +  L   +V+   H S   I G   F ++ L++      PRPETE LV
Sbjct: 40  ILHQNQAITEKDQMLLEQIMVQLTAHRSPQYITGKAYFRDLELSVDERVLIPRPETEELV 99

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L     +   R  +R+LD+GTG+GA+ ++L    P ++    DIS  AL++ K NA+
Sbjct: 100 DLVL-----KENSRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQLVKENAL 154

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N V      +QSD FS +   FD+I+SNPPYI     D +G+ V   +P ++L    +G
Sbjct: 155 KNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLALFADENG 212

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDR 258
            + YR I +  S HL ++G    EIGY Q    +  + + F +++   V   KD  G DR
Sbjct: 213 FAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKR---VRVIKDMFGKDR 269

Query: 259 VLLF 262
           +++ 
Sbjct: 270 MVVM 273


>gi|88704042|ref|ZP_01101757.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71]
 gi|88701869|gb|EAQ98973.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71]
          Length = 280

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   LC         ++  PD+ ++        + + +      +  +LG R+F+
Sbjct: 18  EAQREAQVLLCAALKKPRSYLVAWPDAEVEASAAEHYRHLLAQRASGIPVAYLLGEREFW 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++  T  PRP+TELLV+ AL   L          +LDLGTG+GA+ LAL  E P 
Sbjct: 78  SLTLRVNDATLIPRPDTELLVEQALKLDL-----SPGASVLDLGTGSGAIALALASERPR 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
           ++  GV+ S +ALEIA++N    G+ +     +SDWF++V G  FD+IVSNPPYI     
Sbjct: 133 WQITGVEHSPEALEIARTNGKRLGLKD-VAFHRSDWFTAVRGQRFDLIVSNPPYIAESDG 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L  G DGL   R I       L   G   +E G+ Q   V  +  
Sbjct: 192 HLSSGDLR-FEPRSALVSGADGLDDIRHIIAEAPTWLEPRGRLLLEHGFEQGSTVRALLS 250

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +R    V + +D  G++RV
Sbjct: 251 TRGFTAVASAEDLAGHERV 269


>gi|170768219|ref|ZP_02902672.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia albertii TW07627]
 gi|170122985|gb|EDS91916.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia albertii TW07627]
          Length = 277

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D QR  L   + R    E +  + G R+F+++R
Sbjct: 22  RDAEILLEHVTGKGRTWILAFGETQLTDAQREQLDVLLARRRVGEPVAHLTGVREFWSLR 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +SS T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E      
Sbjct: 82  LFVSSATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERTDCDI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+E+AK NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVELAKRNARHLAI-KNIHILQSDWFSALVGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLSALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIRAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+RV L
Sbjct: 255 YCEVETCRDYGGNERVTL 272


>gi|51891212|ref|YP_073903.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51854901|dbj|BAD39059.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 305

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 4/217 (1%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTG 107
           E +  ILG  +F  +   ++     PR +T  LV+ A+A  +    E R V+R+ D+GTG
Sbjct: 84  EPLQYILGTEEFMGLTFRVTPAVLIPRLDTAALVEQAVARLTGGAAEARGVLRVADIGTG 143

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GL 164
           +GA+ +A+    P  + V VD+S +AL +A  NA  NGV++R    Q D  + +    G 
Sbjct: 144 SGAIAVAVAHLLPHAQVVAVDLSPEALAVAAENARLNGVADRVRFRQGDLLAPLAEEGGR 203

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F  I+SNPPYI    +  L  EVRD++PR++L  G DGL+ YR +A      L   G   
Sbjct: 204 FAAILSNPPYIREDEIAGLMPEVRDWEPRLALVAGDDGLAFYRRLAREAPAFLEPGGFLG 263

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           VE+G  Q   V  +F    L  V   +D  G DR +L
Sbjct: 264 VEVGIGQAPAVAALFREAGLKDVAVCRDTAGVDRAVL 300


>gi|324113972|gb|EGC07946.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii
           B253]
          Length = 276

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPIAHLTGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  G++    I +     L K G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGTAVRQAFIQAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YSNVETCRDYGGNERITL 272


>gi|225568387|ref|ZP_03777412.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM
           15053]
 gi|225162615|gb|EEG75234.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM
           15053]
          Length = 303

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 27/272 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L  VTG++       P++ LD D++  +  + I R  + E +  I G ++F    
Sbjct: 30  DAWYLLEYVTGITRAAYYAHPETELDADKEDAYFAH-IGRRARREPLQHITGEQEFMGYS 88

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES----- 119
             +S     PR +TE+LV+ AL    P +      RILD+ TG+G V +++LK       
Sbjct: 89  FRVSGHVLIPRQDTEILVEEALKVLAPGM------RILDMCTGSGCVLISILKAGRERLR 142

Query: 120 -PFFKGVGVDISCKALEIAKSNAV-----------TNGVSERFDTLQSDWFSSVEGLFDV 167
               +G G DIS +A+ +A+ NA             NG   RF T   D F   E  +D+
Sbjct: 143 MERLEGTGSDISPEAVAVAEYNAARLLGRTETGRGNNGCCARFCT--GDLFEKAEERYDL 200

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI +  +  L  EVR  DP I+LDG  DGL  YR I    + ++ + G    EI
Sbjct: 201 IVSNPPYIRTEEIRKLQREVRLHDPYIALDGKKDGLYFYRRITAESAAYIAEGGYLMFEI 260

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G++Q  DV  + E      V   KD  G DR+
Sbjct: 261 GHDQAEDVCALLEQSGYADVFVKKDLAGLDRI 292


>gi|152970780|ref|YP_001335889.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955629|gb|ABR77659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 283

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F+++ 
Sbjct: 23  RDAEILLGYVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 83  LFVSPATLIPRPDTECLVEQALA-RLPTAP----CRILDLGTGTGAIALALASERPDCEV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA    ++      QSDWFS++ G  F  IVSNPPYI++      
Sbjct: 138 TAVDVMPDAVALALRNAEHLSIAN-VTISQSDWFSALAGQRFATIVSNPPYIDAADPHLA 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 197 EGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFREAG 255

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 256 YLDVATCRDYGDNERLTL 273


>gi|94264415|ref|ZP_01288205.1| Modification methylase HemK [delta proteobacterium MLMS-1]
 gi|93455172|gb|EAT05390.1| Modification methylase HemK [delta proteobacterium MLMS-1]
          Length = 319

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 8/222 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGT 106
           E +  I+G  +F+++   +      PRPETELLV+ AL  + P++       + ILDLGT
Sbjct: 93  EPLAYIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLA-PQLRGGAGRPLTILDLGT 151

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163
           G+G + + L +E    + + VD S  AL +A+ N   + V  R   L +DW S++   + 
Sbjct: 152 GSGILAVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKA 211

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           LFD++V+NPPY+E V +  L  EVRD++PR +LDGG  G++  R +A  +   L   G  
Sbjct: 212 LFDLVVANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGL 271

Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            +EIG++Q+  V ++      +  V    D  G  R LL CR
Sbjct: 272 LMEIGWDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLCCR 312


>gi|120555271|ref|YP_959622.1| HemK family modification methylase [Marinobacter aquaeolei VT8]
 gi|120325120|gb|ABM19435.1| [protein release factor]-glutamine N5-methyltransferase
           [Marinobacter aquaeolei VT8]
          Length = 285

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 135/259 (52%), Gaps = 13/259 (5%)

Query: 6   DSHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L  +TGL+  S +   + D  ++  +RFF    +      + +  +LG ++F+++
Sbjct: 29  DAELLLSHITGLTRTSFRAWPERDVPVEQAERFF--ELVGERASGQPVAYLLGEQEFWSL 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +S  T  PRP TE +V++AL+  LP         +LDLGTGTGA+ LAL  E P ++
Sbjct: 87  PLKVSPSTLIPRPGTECVVEAALSLELPA-----RASVLDLGTGTGAIALALASEQPGWQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            +  D    A+ +A+ N+ + G+      ++S WF  +  G FD+++SNPPYI +     
Sbjct: 142 VMASDRVEDAVALARENSQSLGLP--ITVVKSHWFDQIPAGTFDLLISNPPYIPASDRHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L  G DGL   R +       LN +G   +E GY+Q   V  +F   
Sbjct: 200 REGDVR-FEPESALVAGDDGLDDIRLLVTEGLNWLNPNGWMLLEHGYDQGSAVRDLFAKA 258

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KDYGGNDR+ L
Sbjct: 259 GWRNMETRKDYGGNDRMTL 277


>gi|253688499|ref|YP_003017689.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755077|gb|ACT13153.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 281

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 136/258 (52%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L   ++  L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKRRTFLLAFGETALSAAEQQQLAELLARREQGEPIAYLIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L++S  T  PRP+TE LV+ AL   LP+        +LDLGTGTGA+ LAL  E    + 
Sbjct: 82  LSVSPATLIPRPDTECLVEQAL-LRLPQ----KPCAVLDLGTGTGAIALALASERRDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
            GVD+   A+ +A  NA   G+ +    L   W+S ++   F +I SNPPYI++  +   
Sbjct: 137 TGVDVQPDAVALATKNAQQLGL-DNAHFLSGSWYSPLDQTRFALIASNPPYIDADDMHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  RTI +    +L   G   +E G+ Q   V ++ ++R 
Sbjct: 196 QGDVR-FEPASALIAADNGLADLRTIIESAPHYLAAGGWLLLEHGWQQADAVRQLLQARG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              +   +DYGGNDRV L
Sbjct: 255 FTQIETCQDYGGNDRVSL 272


>gi|330951101|gb|EGH51361.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae Cit 7]
          Length = 277

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIREGFERIQTRRDLGEHERITFGCK 275


>gi|209516554|ref|ZP_03265408.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. H160]
 gi|209502995|gb|EEA02997.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. H160]
          Length = 295

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 131/260 (50%), Gaps = 19/260 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDS--VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
            L  V G    Q+I   +   +L D +R+    A  R +  E + +++G R+F+ +   +
Sbjct: 35  LLTHVLGWRRTQLITRGEEPLLLADVERYRALEA--RRVAGEPVAQLVGAREFFGLEFEV 92

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETELLV++ALA     IE R   R+LDLGTGTGA+ +A+    P  +   +
Sbjct: 93  TPHVLIPRPETELLVETALAA----IEHRSRPRVLDLGTGTGAIAVAIASMRPDAQVWAL 148

Query: 128 DISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
           D S  AL +A  N      A   G +  F  L SDW+ S++    FD IVSNPPYI S  
Sbjct: 149 DRSADALVVAARNGARLLDAKRPGGAVAF--LHSDWYGSLDAALRFDAIVSNPPYIASGD 206

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  R I  G    L  DG   +E GY+Q   V  + 
Sbjct: 207 PHLSEGDLR-FEPRSALTDEADGLSAIRAIVAGAPERLATDGALWIEHGYDQAEAVRALL 265

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +R    V + +D  G +R+
Sbjct: 266 SARGFAEVRSERDLAGIERI 285


>gi|302186443|ref|ZP_07263116.1| modification methylase HemK [Pseudomonas syringae pv. syringae 642]
          Length = 277

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFASAQLLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRKRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|262279541|ref|ZP_06057326.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
 gi|262259892|gb|EEY78625.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
          Length = 270

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 115/217 (52%), Gaps = 16/217 (7%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L+ +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLSLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFD 166
           GA+ LAL  E P ++    DI    LE+AK NA T+G+ + +F      WF +++   FD
Sbjct: 118 GAIALALASEHPDWQVTATDIYAPTLEVAKENAQTHGLQQVKFAC--GAWFDALDKQQFD 175

Query: 167 VIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +IVSNPPYI  E   +  L  E     PR +L     GL+    I       L   G  +
Sbjct: 176 LIVSNPPYIDPEDEHMQALATE-----PRRALVADHKGLADIEIIIAQGKNWLKPQGWIA 230

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +E GY+Q   V  IF       +   +DYG NDRV L
Sbjct: 231 LEHGYDQGHAVRNIFAEHGFSQIKTIQDYGQNDRVTL 267


>gi|291560727|emb|CBL39527.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SSC/2]
          Length = 283

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 128/241 (53%), Gaps = 10/241 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D + D          I +  +H  +  ILG ++F      ++ D   PR +TE +++  L
Sbjct: 47  DEINDKEAEERYKELIQKRKEHVPLQYILGTQEFMGYTFKVTPDVLIPRADTETVLEEVL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
              L + +K D   ILD+ TG+G  A+ LAL+ +      VG DIS KAL+IAK+N    
Sbjct: 107 D-QLKQSKKPDT--ILDICTGSGCIAISLALILKPEVC--VGTDISEKALKIAKANGENL 161

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               +F  +QSD F +V G +D+I+SNPPYI +     L  EV+D++P ++LDG  DGL 
Sbjct: 162 APMVKF--IQSDLFENVTGSYDLIISNPPYITTEECGKLMPEVKDYEPMLALDGKEDGLY 219

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL-FC 263
            Y+ I      +LN  G+ + EIGY+Q   V  + E++    V   KD  G DR++  F 
Sbjct: 220 FYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLMEAQDFACVEIKKDLAGLDRLVFGFA 279

Query: 264 R 264
           R
Sbjct: 280 R 280


>gi|254429562|ref|ZP_05043269.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
 gi|196195731|gb|EDX90690.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 125/257 (48%), Gaps = 8/257 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V G     +   P+  L   Q+   T+ +   +  E +  ++G R+F+ 
Sbjct: 20  AALDAELLLCHVLGKPRSYLFTWPERELSTAQQADFTSLLGHRVAGEPVAHLIGEREFFG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++DT  PRP+TE LV+ AL+  +P        R++DLGTGTGA+ ++L    P +
Sbjct: 80  HLFRVTADTLIPRPDTETLVEKALSLDVPA-----EARVVDLGTGTGAIGVSLALARPDW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VD+S  AL++A  NA   G +     LQ  W S   G FD+IVSNPPYIE      
Sbjct: 135 HVTLVDLSEAALQVAADNAHRLGAA--VTCLQGSWLSPCPGPFDLIVSNPPYIEESDHHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L    +GL+    I    +  L   G   +E G+ Q   V  +    
Sbjct: 193 DEGDVR-FEPRSALVAPNNGLADLAAITQQAAGKLVAGGWLLLEHGFEQGEAVRTLLTQA 251

Query: 243 KLFLVNAFKDYGGNDRV 259
               V   +D GGNDRV
Sbjct: 252 GFVQVGTAQDLGGNDRV 268


>gi|94271211|ref|ZP_01291906.1| Modification methylase HemK [delta proteobacterium MLMS-1]
 gi|93450531|gb|EAT01681.1| Modification methylase HemK [delta proteobacterium MLMS-1]
          Length = 325

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 8/222 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGT 106
           E +  I+G  +F+++   +      PRPETELLV+ AL  + P++       + ILDLGT
Sbjct: 93  EPLAYIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLA-PQLRGGAGRPLTILDLGT 151

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163
           G+G + + L +E    + + VD S  AL +A+ N   + V  R   L +DW S++   + 
Sbjct: 152 GSGILAVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKA 211

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           LFD++V+NPPY+E V +  L  EVRD++PR +LDGG  G++  R +A  +   L   G  
Sbjct: 212 LFDLVVANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGL 271

Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            +EIG++Q+  V ++      +  V    D  G  R LL CR
Sbjct: 272 LMEIGWDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLRCR 312


>gi|294650078|ref|ZP_06727462.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292824029|gb|EFF82848.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 273

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 15/264 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++   L  + G++S ++ +  +  L + Q     + + R  + E +  + G + F+ + 
Sbjct: 19  QEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTLD 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PRP+TE+LV++ L  SL P+        I+DLGTGTGA+ LAL  E P + 
Sbjct: 79  LKVTHDTLVPRPDTEILVETVLKLSLDPQ------ANIVDLGTGTGAIALALASERPQWS 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
               DI    L++A+ NA+ +G+S  +F      WF ++  +  FD+IVSNPPYI+    
Sbjct: 133 VTATDIYQPTLDVAQDNALKHGLSLVKFAC--GAWFEALVEQQQFDLIVSNPPYIDP--- 187

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D + ++    +P  +L     GL+    I       L   G  ++E GY+Q+  V  IFE
Sbjct: 188 DDVHMQKLKSEPERALIAANHGLADIEIIIAQGKAWLKAKGWIALEHGYDQRQAVREIFE 247

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   KDYGGNDRV L  +
Sbjct: 248 LHGFEQIQTIKDYGGNDRVSLAQK 271


>gi|20806671|ref|NP_621842.1| rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4]
 gi|20515121|gb|AAM23446.1| predicted rRNA or tRNA methylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 285

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 130/243 (53%), Gaps = 9/243 (3%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           ++ +  D VL + +       I +         I+  + F      +      PRPETE+
Sbjct: 45  KLAIKRDEVLKEEELERFLKYIEKRKSRIPYQYIVKKQHFMGFEFYVDERVLIPRPETEI 104

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV+ AL     R++  D+  ILD+GTG+GA+ +++ K  P  K   VD+S +ALE+AK N
Sbjct: 105 LVEEALK----RMKSGDL--ILDIGTGSGAIAISIAKLFPDCKVYAVDVSEEALEVAKYN 158

Query: 141 AVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A   GV+E+   ++SD FS++     FD+IVSNPPYI+   ++ L  EV+  +P ++LDG
Sbjct: 159 AEKLGVAEKIIFIKSDIFSNIPQDVKFDLIVSNPPYIKKAELENLQEEVKK-EPILALDG 217

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DGL  Y+ I      +L K G    EIGY Q+ +V +IF       +   KD    DR
Sbjct: 218 GEDGLFFYKRIIPDCKFYLKKGGRGLFEIGYGQREEVEKIFLENGFDEIEVIKDLAHIDR 277

Query: 259 VLL 261
           V++
Sbjct: 278 VII 280


>gi|325263709|ref|ZP_08130442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. D5]
 gi|324030747|gb|EGB92029.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. D5]
          Length = 306

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 25/278 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V+G+        PD +L + Q    T+ I R  +   +  + G ++F  +  
Sbjct: 25  DAWYLLEYVSGVGRAMYYAMPDKLLTEAQEKQYTDYIERRAQRIPLQHLTGTQEFMGLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK------------------RDVVRILDLGTG 107
            ++     PR +TE+LV+ AL  +   +E                   R   R+LD+ TG
Sbjct: 85  QVNEHVLIPRQDTEVLVEEALGAAEKYMEHMSCSFAGNRGAGDGCEDARKTFRLLDMCTG 144

Query: 108 TGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +G + L++L      +    KG+GVD+S KALE A++NA  + +    D L SD F  VE
Sbjct: 145 SGCILLSMLHYISKNKQMQSKGLGVDVSEKALETARANA--DALHIDADFLHSDLFEQVE 202

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G F +IVSNPPYI + +++ L  EV+  DP ++LDG  DGL  YR I       L   G 
Sbjct: 203 GSFQMIVSNPPYIRTDVIETLQEEVKGHDPVLALDGRADGLYFYRKIVREAKHCLVSGGS 262

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              EIG +Q   V  +        V+  KD  G DRV+
Sbjct: 263 LLFEIGADQGEAVSAMMWEAGYSRVSVKKDLAGLDRVV 300


>gi|91792281|ref|YP_561932.1| HemK family modification methylase [Shewanella denitrificans OS217]
 gi|91714283|gb|ABE54209.1| modification methylase, HemK family [Shewanella denitrificans
           OS217]
          Length = 284

 Score =  126 bits (317), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 129/238 (54%), Gaps = 10/238 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L  +Q     N +++  +   +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 50  PEKALSVQQFRAFNNMVLKRQQGVPVAHIIGEREFWSLPFIVNESTLIPRPDTEILVETA 109

Query: 86  LAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           L  +L P        ++LDLGTGTGA+ L+L  E P +K   +D   +A+E+AK+N   N
Sbjct: 110 LNLTLSPH------AKVLDLGTGTGAIALSLASERPDWKVTAIDKVDEAVELAKANR-QN 162

Query: 145 GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
               + + LQSDWFS+V+   FD+IVSNPPYI++   + L L    F+P+ +L  G  G 
Sbjct: 163 LNLPQVEILQSDWFSAVKDRDFDLIVSNPPYIDAED-EHLNLGDVRFEPQSALTAGEHGY 221

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +    IA+    HL   G   +E G+ Q + V           V   +D+G NDR  L
Sbjct: 222 ADLFHIAEHAREHLVHGGYLLLEHGFEQAIKVREKLIELGYQQVATVRDFGSNDRCTL 279


>gi|289678405|ref|ZP_06499295.1| modification methylase HemK [Pseudomonas syringae pv. syringae FF5]
          Length = 277

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|218549097|ref|YP_002382888.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|218356638|emb|CAQ89264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia fergusonii ATCC 35469]
 gi|325497512|gb|EGC95371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ECD227]
          Length = 276

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E +  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPVAHLTGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L  G  G++    I +     L K G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGAAVRQAFIQAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YSNVETCRDYGGNERITL 272


>gi|213967223|ref|ZP_03395372.1| hemK protein [Pseudomonas syringae pv. tomato T1]
 gi|301381041|ref|ZP_07229459.1| hemK protein [Pseudomonas syringae pv. tomato Max13]
 gi|302060377|ref|ZP_07251918.1| hemK protein [Pseudomonas syringae pv. tomato K40]
 gi|302134867|ref|ZP_07260857.1| hemK protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928065|gb|EEB61611.1| hemK protein [Pseudomonas syringae pv. tomato T1]
 gi|331018121|gb|EGH98177.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 277

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGADGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HLN DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275


>gi|261409697|ref|YP_003245938.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. Y412MC10]
 gi|261286160|gb|ACX68131.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. Y412MC10]
          Length = 296

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 11/267 (4%)

Query: 1   MQALRDSHSFLCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           M+  R++   L  V GLS    +  + DP     + +R  L  AI R  +      I+G 
Sbjct: 31  MEPQRNAQLLLEHVLGLSGTSYYMALTDP---FPEGRRLALEEAITRKAEGVPAQYIIGE 87

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL 116
           ++FY     ++     PRPETELLV++ L +      + D  ++++D+GTG+GA+ + L 
Sbjct: 88  QEFYGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPQPDGGLKVVDIGTGSGAIAITLA 147

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
            +S  +     DIS  ALE+A  NA   G    F   Q +      G+  D++VSNPPYI
Sbjct: 148 LQSKGWDVFASDISPDALEVAARNAKKLGAQVEFR--QGNLLEPFAGMGPDILVSNPPYI 205

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  ++ L  EVRD++PR +LDGG DGL+ YR +   +        L + E+G  Q  DV
Sbjct: 206 PAEDIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLPFLSAPPRLIAFELGMGQAGDV 265

Query: 236 VRIFESRKLF-LVNAFKDYGGNDRVLL 261
             +      +  +    D  G DR +L
Sbjct: 266 AELLRKAGYWEEIVTVPDLAGIDRHVL 292


>gi|167038491|ref|YP_001666069.1| HemK family modification methylase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167038766|ref|YP_001661751.1| HemK family modification methylase [Thermoanaerobacter sp. X514]
 gi|256751360|ref|ZP_05492239.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300913649|ref|ZP_07130966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X561]
 gi|307723336|ref|YP_003903087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X513]
 gi|320116887|ref|YP_004187046.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166853006|gb|ABY91415.1| modification methylase, HemK family [Thermoanaerobacter sp. X514]
 gi|166857325|gb|ABY95733.1| modification methylase, HemK family [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749742|gb|EEU62767.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300890334|gb|EFK85479.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X561]
 gi|307580397|gb|ADN53796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X513]
 gi|319929978|gb|ADV80663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 279

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 9/216 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H     I+    F  +   +  +   PRPETE+LV+  L     R++K +   ++D+GTG
Sbjct: 66  HIPYQYIVKKHYFMGLEFFVDENVLIPRPETEILVEEVLK----RLKKGNT--LIDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165
           +GA+ ++++K  P      VDIS KALE+AK NA  + V ++   ++SD FS V     F
Sbjct: 120 SGAIAVSVVKYFPDCFVYAVDISRKALEVAKYNAKKHNVLDKIVFIESDVFSQVPKNIKF 179

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D IVSNPPYI+   ++ L  EV+  +P I+LDGG DGL  Y+ I +G   +LN +G    
Sbjct: 180 DFIVSNPPYIKRGELETLQEEVKK-EPIIALDGGEDGLFFYKKIIEGAPFYLNPEGAICF 238

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           E+GY+QK +V  +        +   KD  G DRV++
Sbjct: 239 EMGYDQKEEVTDLLTKGGFKNIEVIKDLSGIDRVVI 274


>gi|183598964|ref|ZP_02960457.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827]
 gi|188021180|gb|EDU59220.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827]
          Length = 281

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  +TG S   +    ++ L   +   L + + R  + E I  I+G R+F++
Sbjct: 20  AKRDAEILLQHITGRSRTFIFAFAETELTQPEYEALESLLCRREQGEPIAYIIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA  LP        +ILDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALA-RLP----AQRCQILDLGTGTGAIALAIASERPDS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
             +G+D +  A+ +A+ N     ++     LQSDWF+S+    FD+IVSNPPYI+     
Sbjct: 135 VIIGIDFNLDAVSLAQRNQQRLALN-NVQFLQSDWFTSLSCQHFDMIVSNPPYIDGNDDH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GLS    I      +LN  G   VE G+ Q   V  +F+ 
Sbjct: 194 LQQGDVR-FEPLTALVADNHGLSDLDHIVSTSRSYLNPQGWLLVEHGWQQGAAVRELFKQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +    DYGG DR+ L
Sbjct: 253 YGYSNIETCLDYGGRDRISL 272


>gi|332993698|gb|AEF03753.1| peptide release factor-glutamine N5-methyltransferase [Alteromonas
           sp. SN2]
          Length = 288

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/217 (39%), Positives = 118/217 (54%), Gaps = 13/217 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDL 104
           +  + G RDF+ +RL  S  T  PRP+TE+LV+  L+      F+L  +E   +  I DL
Sbjct: 68  VAYLTGSRDFWTLRLATSPHTLIPRPDTEVLVEQTLSCIASAEFAL-EVEDNKLA-ICDL 125

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG 163
           GTGTGA+ LAL  E P     GVD+  +A+++A SNA  N ++  +F   QS WF ++  
Sbjct: 126 GTGTGAIALALASELPTANITGVDLLHEAVQLATSNAALNSITNAQFK--QSSWFDNLAN 183

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             F VIVSNPPYIE         +VR F+P  +L  G DGL   + I      HL + GL
Sbjct: 184 EKFHVIVSNPPYIEISSPFLQQGDVR-FEPASALTSGADGLDDIKHIIALAPAHLLEGGL 242

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            + E G++Q   V  +  +     V   KDYGGNDRV
Sbjct: 243 LAFEHGFDQAKAVGDLLNAHGFVNVCTEKDYGGNDRV 279


>gi|134294602|ref|YP_001118337.1| HemK family modification methylase [Burkholderia vietnamiensis G4]
 gi|134137759|gb|ABO53502.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 280

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 127/260 (48%), Gaps = 11/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ L+            R +  E + +++G R+F+    
Sbjct: 19  DARVLLSHALGWTRTQLITRGDAPLEPAAIARYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +D S  ALE+A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALEVAQRNAAKLLDARRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  + 
Sbjct: 195 PHLEQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            S     V +  D    +R 
Sbjct: 254 ASHGFVAVESLADLAAIERT 273


>gi|330887863|gb|EGH20524.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 277

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++        T  + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFTGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|238019081|ref|ZP_04599507.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748]
 gi|237864336|gb|EEP65626.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748]
          Length = 289

 Score =  126 bits (316), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I+G +DF  +   ++     PRP+TE L++  L  + P+  K   VRILD+ T
Sbjct: 71  KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-AYPKDSK---VRILDVCT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163
           G G + L+LL   P   GVG++IS  AL +A+ N     +++R   L+SD FS+++G   
Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISTDALTVAEENRERFNLNDRVQLLESDMFSALDGKAE 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +     L  +V + +P I+L GG DGL  YR +A     +L   G  
Sbjct: 187 KFDLIVSNPPYIRTGDAKLLSQDVLN-EPHIALFGGEDGLEFYRILAKACGTYLKPQGRI 245

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           + EIGY+Q  +V  +  E+     +    D GGN+RV+
Sbjct: 246 AFEIGYDQAEEVKSLLKEAGHYSNIQCIADLGGNNRVV 283


>gi|330967415|gb|EGH67675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 277

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI    S HLN DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADASAHLNADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|330873306|gb|EGH07455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 277

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++S T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVASHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HLN DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPAHLNADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|254246466|ref|ZP_04939787.1| Methylase [Burkholderia cenocepacia PC184]
 gi|124871242|gb|EAY62958.1| Methylase [Burkholderia cenocepacia PC184]
          Length = 280

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LDD   +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDDAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L  G DGLS  RTI  G   +L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDGADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           I  S     V +  D    +R 
Sbjct: 252 ILASHGFVAVESLADLTAIERT 273


>gi|28868325|ref|NP_790944.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28851562|gb|AAO54639.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 277

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DYAQVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGADGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HLN DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275


>gi|121727186|ref|ZP_01680353.1| hemK protein [Vibrio cholerae V52]
 gi|147674049|ref|YP_001217694.1| hemK protein [Vibrio cholerae O395]
 gi|262167527|ref|ZP_06035233.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27]
 gi|121630431|gb|EAX62824.1| hemK protein [Vibrio cholerae V52]
 gi|146315932|gb|ABQ20471.1| hemK protein [Vibrio cholerae O395]
 gi|227014074|gb|ACP10284.1| hemK protein [Vibrio cholerae O395]
 gi|262024099|gb|EEY42794.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27]
          Length = 286

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L  DG    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMSD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIMTEQDYAGHDRVTL 277


>gi|126665162|ref|ZP_01736145.1| Modification methylase HemK [Marinobacter sp. ELB17]
 gi|126630532|gb|EBA01147.1| Modification methylase HemK [Marinobacter sp. ELB17]
          Length = 314

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 131/281 (46%), Gaps = 33/281 (11%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +VTG S  +    P+  +   Q       + +    E +  +LGW++F+++ L
Sbjct: 38  DAELLLVQVTGWSRTRFRAFPEQHVSLVQAAAFEQLVDKRAAGEPVAYVLGWQEFWSLPL 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S+ T  PRP+TE +V+ AL   LP        R+LDLGTGTGA+ LAL  E P +   
Sbjct: 98  QVSAATLIPRPDTECVVEQALTLDLPA-----QARVLDLGTGTGAIALALASERPDWDIT 152

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------------------- 164
             D    A+ +A+SNA    ++     ++S WF  +  +                     
Sbjct: 153 ASDFVDAAVALAQSNAA--ALNLPIQVVKSHWFDQLTAVCFDQRLDESGDPRRDLRGDLN 210

Query: 165 ----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FD+IVSNPPYI +        +VR F+P  +L  G DGL   R I       LN  
Sbjct: 211 RDQGFDLIVSNPPYIANTDHHLSEGDVR-FEPASALVSGADGLDDIRHIVAAAPSWLNAG 269

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E GY+Q   V  +   +    V++ +DYG NDR+ L
Sbjct: 270 GWLLLEHGYDQAQAVQGLLHQQGFDQVHSRQDYGRNDRMTL 310


>gi|330975578|gb|EGH75644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 277

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|330972815|gb|EGH72881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 277

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|296111566|ref|YP_003621948.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU
           11154]
 gi|295833098|gb|ADG40979.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU
           11154]
          Length = 331

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 120/221 (54%), Gaps = 5/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I + L ++ +  ILG   FY     +      PRPETE LV+  L     +I +   + +
Sbjct: 110 IAKLLANQPVQYILGHAPFYGREFIVDERVLIPRPETEQLVEWILKDVSSQIAQP--ISV 167

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+GA+   L+ E+   +G   DIS  AL +A+ NA   G+      ++SD +S+V
Sbjct: 168 LDIGTGSGAIIETLMLENSDIRGFAADISSDALAVAELNAQRLGL-HYLHVIESDVYSAV 226

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            GL FDVIVSNPPYI S   D + + V +F+PR +L    DGL+ Y  +A+ +  HL + 
Sbjct: 227 AGLKFDVIVSNPPYIASTDEDEMDISVLNFEPRTALFAEHDGLAIYELLAEKLDAHLTEH 286

Query: 221 GLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           G    EIGY Q   VV I  ++     +   +D+ G DR++
Sbjct: 287 GRAYFEIGYKQGQQVVDIMQQALPQAKITLRQDFAGLDRMI 327


>gi|229828876|ref|ZP_04454945.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM
           14600]
 gi|229792039|gb|EEP28153.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM
           14600]
          Length = 284

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 17/233 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97
           I R  +   + +I G + F  +   ++     PR +TE LV+  L    +     ++ R 
Sbjct: 48  IERRAQRIPLQQITGSQAFMGLDFMVNEHVLCPRQDTETLVEEGLTILASLQSGSVKNRQ 107

Query: 98  V-----VRILDLGTGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                 +R+LDL TG+G + ++LL     +E+P   G+  D+S +AL +A+ NA  NGVS
Sbjct: 108 ANADREIRLLDLCTGSGCILISLLALARGQETPI-HGLAADLSPEALAVARENAKRNGVS 166

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F  + SD F+ +EG FD+I +NPPYI S  ++ L  EVRD +PR++LDG  DGL+ YR
Sbjct: 167 AAF--VLSDLFAEIEGSFDLITANPPYIPSGQLEDLMPEVRDHEPRMALDGDEDGLAFYR 224

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            IA     +L + G   +EI ++Q   V ++        +   +D  G DRVL
Sbjct: 225 RIAGQAPDYLREGGWLLMEIAFDQGQAVRQMLADGPFEEIEIIQDLSGRDRVL 277


>gi|145588323|ref|YP_001154920.1| HemK family modification methylase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046729|gb|ABP33356.1| [protein release factor]-glutamine N5-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 283

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 3/219 (1%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + L  E I  ++G R F+N+ L ++     PR ETELLVD  L       + + +V++LD
Sbjct: 62  KRLDGEPIAYLIGKRGFHNIELQVAPGVLIPRAETELLVDIGLKEIARLTDNQKMVKVLD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LAL  E+        D S  AL IA+SNA    +  R    Q +W+ ++  
Sbjct: 122 LGTGSGAIALALTHEASNISVTATDQSLDALAIARSNAHYLELENRVCFAQGNWYEAISK 181

Query: 164 --LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             +FD+I+SNPPYI +        ++R F+P  +L     GL+   TI  G   HLN +G
Sbjct: 182 NDVFDIILSNPPYIANHDPHLTQGDLR-FEPLSALTDHSTGLTCLETIIFGAKAHLNTEG 240

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L +VE G++Q   VV +  + +L  +    D  G++RV+
Sbjct: 241 LLAVEHGFDQSEAVVELMRTAQLKDIQIHLDLAGHNRVV 279


>gi|260438935|ref|ZP_05792751.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus
           DSM 2876]
 gi|292808586|gb|EFF67791.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus
           DSM 2876]
          Length = 276

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 12/261 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+        G++    ++D ++  +     F  + I + L H  +  ILG   F 
Sbjct: 21  EAGNDAWLLFSEAFGMTRTDYLIDKNAECNAGHIPFFDSCIEKRLAHIPVQYILGKAYFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKES 119
                ++++   PR +TE+LV   L ++      +D  +ILD+ TG+G  A+ L+LL  +
Sbjct: 81  GYEFEVNNNVLIPRFDTEVLVSEVLKYT------QDDFKILDMCTGSGCIAISLSLLSGA 134

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                 GVDIS KAL +A  N V N  +++   ++S+ F +++G F++IVSNPPYI +  
Sbjct: 135 EV---TGVDISEKALAVADYNKVINK-ADKVTFVKSNMFENIDGAFNLIVSNPPYIPTKD 190

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EV++ +P ++L+G  DGL  YR +A+  +++L  +G   +EIGYNQ  DV  + 
Sbjct: 191 IFELEHEVKNEEPMLALNGHDDGLFFYRILAEESAKYLRHNGGIFMEIGYNQAEDVRNLL 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  ++  KD  G DRV+
Sbjct: 251 IKNNFTDISVIKDLAGLDRVV 271


>gi|218961885|ref|YP_001741660.1| modification methylase, HemK family [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730542|emb|CAO81454.1| modification methylase, HemK family [Candidatus Cloacamonas
           acidaminovorans]
          Length = 273

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           LS  ++I+    +L D +   + NA  R  K E    I G   FY + L ++     PRP
Sbjct: 34  LSRSEIILSRQRILTDWEGEIIGNAFSRLEKGEPPQYITGTAYFYGLDLKVNPAVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LV+     ++ R+  +   RILD+GTG+GA+ +AL    P       +IS  ALE 
Sbjct: 94  ETERLVE----LTMERL--KGTERILDIGTGSGAIAIALKHNLPSLNVSATEISFSALET 147

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA        F    SD F  V+  ++V++SNPPYI    +  L   ++D +P I+L
Sbjct: 148 AKKNAEIYRADIHF--YLSDCFPPVKQSYEVLISNPPYISKAEIATLNSRIKDKEPVIAL 205

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            GG DGL  YR +    S +L+++G  ++E    QK  ++ I        +   KD    
Sbjct: 206 QGGEDGLDFYRKLLSESSEYLSENGFLALEHSDTQKEAIMNIARKEGWTKIEPLKDLTDK 265

Query: 257 DRVLLFCR 264
           DR L   R
Sbjct: 266 DRYLFIYR 273


>gi|90412791|ref|ZP_01220791.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum 3TCK]
 gi|90326150|gb|EAS42577.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum 3TCK]
          Length = 282

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+    D Q       + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKEPSDEQFTLFEALLARRITGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL   +P         +LDLGTGTGA+ LA+  E    +  
Sbjct: 87  KVSPFTLIPRPDTERLVEVALE-KIP----TQACTVLDLGTGTGAIALAIASERNDAQVT 141

Query: 126 GVDISCKALEIAKSNAV-TNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           G+D+  +A E+A  N    N  + RF  L   W++ +  + LF VIVSNPPYI++     
Sbjct: 142 GIDLRPEAAELAAENGQRLNIQNARF--LAGSWYTPLASDELFAVIVSNPPYIDAADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  + I++   +HL   G   +E G+ Q   V  I +  
Sbjct: 200 VLGDVR-FEPKTALIADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
              LV+  +DY G DRV L C
Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279


>gi|66044203|ref|YP_234044.1| modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254910|gb|AAY36006.1| Modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
          Length = 277

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 123/240 (51%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|148266071|ref|YP_001232777.1| HemK family modification methylase [Geobacter uraniireducens Rf4]
 gi|146399571|gb|ABQ28204.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 284

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 126/256 (49%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   LC V GL    + V+ D  L + +       + R  K E +  ILG ++F  +  
Sbjct: 32  ESEWMLCAVLGLDRVGLYVNFDKPLTEAELSGYRGMVTRRSKREPLQYILGSQEFMGLEF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PR +TE+LV  A A         +  RILD+G G+G V +AL K  P    +
Sbjct: 92  EVSPAVLIPRHDTEVLVAEAAA------RCGEHCRILDIGVGSGCVSVALAKALPTATIL 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
           GVD S +AL +A+ NA   GV+      +   F   +   FD+IVSNPPYI +  +  L 
Sbjct: 146 GVDSSPQALVLAQKNADKQGVT--VSLFEGSLFEPFQDQRFDLIVSNPPYIPTDDLKTLQ 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD++P  +LDGG DGL  YR I    S +LN  G    E+G  Q   V+ + +    
Sbjct: 204 PEVRDYEPIQALDGGADGLDFYRLIVPAASDYLNPGGWLLFEVGVGQAEAVLGLLDKTGF 263

Query: 245 FLVNAFKDYGGNDRVL 260
             +   KD  G +RV+
Sbjct: 264 GELFTAKDPNGIERVV 279


>gi|330899754|gb|EGH31173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 277

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|294670647|ref|ZP_06735523.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307617|gb|EFE48860.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 271

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 126/260 (48%), Gaps = 17/260 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  VTG +  Q+I     +LD+ Q   L     R L  E +  ILGWR+FY  R 
Sbjct: 16  EARMLLQAVTGWTRAQLITRDGEMLDEGQTADLQAMQQRRLNGEPMAYILGWREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
             +  T  PRPETE LV++AL    P+        + DLGTG+GAV + L  E P    +
Sbjct: 76  RTTPATLIPRPETEHLVEAALQHLPPQ------GLVWDLGTGSGAVAVTLACERPDASVL 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
             DIS  AL +A+ NA  NG    F      WF     S +  FD++VSNPPYIE+   D
Sbjct: 130 ASDISPAALAVARQNAADNGADVSFAC--GSWFDIDRPSEKHGFDLLVSNPPYIEA---D 184

Query: 182 CLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L+  D  F+P  +L    DGLS  R +A   + +L   G   +E G+NQ   V +I 
Sbjct: 185 DGHLQQGDLRFEPANALTDFSDGLSCIRELAAHGAEYLKPGGRLIMEHGWNQGAAVRQIL 244

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +     +    D  G +R+
Sbjct: 245 AAAGWTEIETQTDLAGLERI 264


>gi|54309993|ref|YP_131013.1| putative HemK protein, methylase of polypeptide chain release
           factors [Photobacterium profundum SS9]
 gi|46914432|emb|CAG21211.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum SS9]
          Length = 282

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 132/261 (50%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+    D Q       + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKAPSDEQFTLFEALLARRITGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL   +P         +LDLGTGTGA+ LA+  E    +  
Sbjct: 87  KVSPFTLIPRPDTERLVELALE-KIP----TQACTVLDLGTGTGAIALAIASERNDAQVT 141

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           G+D+  +A E+A  N     +   RF  L   W++ +  + LF VIVSNPPYI++     
Sbjct: 142 GIDLRPEAAELAAENGQRLNIQNVRF--LAGSWYTPLASDELFSVIVSNPPYIDAADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  + I++   +HL   G   +E G+ Q   V  I +  
Sbjct: 200 VLGDVR-FEPKTALVADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
              LV+  +DY G DRV L C
Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279


>gi|40062642|gb|AAR37563.1| modification methylase, HemK family [uncultured marine bacterium
           313]
          Length = 279

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 140/267 (52%), Gaps = 27/267 (10%)

Query: 17  LSSHQVI---VDPDSVLDD----RQRFFLTN---------------AIVRSLKHESIHRI 54
           L +H +I   +D   +L D     + FF+TN               AI R +K E +  I
Sbjct: 14  LKNHNIISHELDAQVILSDIMGVTRDFFITNSHINVSKNTIKKFDHAIKRRVKREPVAYI 73

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +  ++F++    ++  T  PR ETELL+   + F      K   + +LD+GTG+G + L+
Sbjct: 74  IRKKEFWSQDFLVNQATLVPRAETELLIYKVVDFF-----KNKRINVLDIGTGSGCILLS 128

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +LKE    +GVG+DIS KA++ A++N+    +  R      D      G +D+IVSNPPY
Sbjct: 129 ILKELDLSRGVGIDISAKAIKTAQTNSKNLNLFHRSKFKVFDISKFNVGKYDLIVSNPPY 188

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I S  +  L  ++ +++P ++L+GG+DGL   R +    +  L K+GL ++EIG+NQ + 
Sbjct: 189 IPSKDIKNLSQDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKKNGLFAIEIGFNQYLK 248

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           V  + +      ++   DY  N R ++
Sbjct: 249 VSSLLKKYGFREMHRQCDYDHNVRCII 275


>gi|146311982|ref|YP_001177056.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter sp. 638]
 gi|145318858|gb|ABP61005.1| [protein release factor]-glutamine N5-methyltransferase
           [Enterobacter sp. 638]
          Length = 276

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q   L++ + R    E +  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKARTYLLAFGETELTADQHAQLSDLLSRRKAGEPVAHLTGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S+ T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LYVSAATLIPRPDTECLVEHALA-RLPAT----ACRILDLGTGTGAIALALASERPDCQI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  N    G +      QS WF ++ G  F++IVSNPPYI+       
Sbjct: 137 TAVDVMPDAVALALRNVARLGFN-NVKIQQSSWFDALVGQQFEMIVSNPPYIDERDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+    I     +HL   G   +E G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPLTALVAAEEGLADIAHIVTVSRQHLTAGGWLLIEHGWTQGEAVRALFTHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGNDR+ L
Sbjct: 255 YERVETCQDYGGNDRLTL 272


>gi|78221602|ref|YP_383349.1| modification methylase HemK [Geobacter metallireducens GS-15]
 gi|78192857|gb|ABB30624.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 284

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 124/256 (48%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L    GL    + V+ D  L+  +   +   + R  K E +  +LG ++F  +  
Sbjct: 32  ETEWLLSAALGLDRVGLYVNFDKPLNAEELSAVRGLVARRAKREPLQYVLGTQEFCGLDF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE+LV+ AL              +LD+G G+G + +AL K  P  +  
Sbjct: 92  AVTPAVLIPRHDTEVLVEEALR------RAPHAATVLDIGVGSGCIAVALAKNLPDAQVW 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184
           GV+ S  A+ +A+ N   +GV  R        F    +  FD+IVSNPPYI +  +D L 
Sbjct: 146 GVEQSAGAITLARQNVERHGV--RVILCAGSLFEPFADQRFDLIVSNPPYIPTADLDTLQ 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+++PR +LDGG DGL  YR I      HLN  G   VE+G  Q   V+ +F+    
Sbjct: 204 PEVREYEPRAALDGGADGLDFYRIIVPAALEHLNAGGWLMVELGIGQAEAVLGMFKQAGF 263

Query: 245 FLVNAFKDYGGNDRVL 260
                 KD  G DRV+
Sbjct: 264 TGCFTAKDLNGIDRVV 279


>gi|327470058|gb|EGF15522.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK330]
          Length = 276

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 14/234 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L+DR++       V  L H+    I+G  DF+ + L +      PRPETE LV+  L+ +
Sbjct: 49  LEDREQLKAIQGQV--LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                    + +LD+GTG+GA+ LAL+   P ++    D+S  AL +A  NA + G+S  
Sbjct: 107 -----PESSLSVLDIGTGSGAIALALVNSRPDWQITASDLSKDALSLAADNAQSCGLSLT 161

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           F  +QSD   S++G FD+IVSNPPYI     + +GL V   +P ++L    DG + YR I
Sbjct: 162 F--VQSDCLDSIQGKFDIIVSNPPYISEANKNEVGLNVLTSEPHMALFAEEDGCAVYRKI 219

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           A+    +L + G   +EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 220 AEQAGDYLTEKGKIYLEIGYKQGDSVRELL--KKSFPQKQIRVLKDQFGKDRMV 271


>gi|327393651|dbj|BAK11073.1| protein methyltransferase HemK [Pantoea ananatis AJ13355]
          Length = 280

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 132/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   +++L + Q   L   + R  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE+LV+ ALA  LP        R+LD+GTG+GA+ LA+  E P    
Sbjct: 82  LQVNDATLIPRPDTEILVEQALAH-LP----ESPARVLDMGTGSGAIALAIASERPDCDV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +GVD    A+ +A+ NA    +      +QS WF+ +    FD+IVSNPPYI++      
Sbjct: 137 IGVDRIPAAVALAQRNAAHLAIPNA-TFIQSHWFAQITPARFDLIVSNPPYIDANDRHLN 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L     GL+  R + +     L   G   +E G+ Q   V  + +   
Sbjct: 196 EGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQHH 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V    DYGGN RV
Sbjct: 255 YLSVATANDYGGNPRV 270


>gi|289647288|ref|ZP_06478631.1| hemK protein [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 277

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLTRHGFERIQTRRDLGEHERITFGCK 275


>gi|262282282|ref|ZP_06060050.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
 gi|262261573|gb|EEY80271.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
          Length = 276

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         V +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLNLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A+ NA + G+S  F  +QSD   +++G F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALSLARENARSCGLSLTF--VQSDCLDAIQGNF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG   YR I +    +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYEVYRKITEQAGDYLTEKGKIYL 235

Query: 226 EIGYNQK---VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           EIGY Q    VD+++ F  +K   +   KD  G DR++
Sbjct: 236 EIGYKQGDGVVDLLKQFFPQK--RIRVLKDQFGKDRMV 271


>gi|258542229|ref|YP_003187662.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01]
 gi|256633307|dbj|BAH99282.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01]
 gi|256636366|dbj|BAI02335.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-03]
 gi|256639419|dbj|BAI05381.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-07]
 gi|256642475|dbj|BAI08430.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-22]
 gi|256645530|dbj|BAI11478.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-26]
 gi|256648583|dbj|BAI14524.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-32]
 gi|256651636|dbj|BAI17570.1| modification methylase HemK [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654627|dbj|BAI20554.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-12]
          Length = 292

 Score =  125 bits (314), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 138/260 (53%), Gaps = 7/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++   L     L+  Q++    +     + FF  + + R   HE    I G + F+++ 
Sbjct: 34  REARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVNRRAAHEPFAYITGSKGFWSLD 91

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  +  PR +TE L+ S L +   R ++   + ILDLGTGTG + LA L E P   G
Sbjct: 92  LAVSPASLVPRGDTETLITSLLEY---RPDQTAALNILDLGTGTGCLLLAALAEYPKAHG 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           VGVDI+ +A  +A +NA    +S+R   + ++W +++  +  FDV++SNPPYI +  +  
Sbjct: 149 VGVDINPQAAILAHANAQRCCMSDRALFMAAEWDAALVPDMRFDVVLSNPPYIPTSDLAD 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ +P  +LDGG DGL+ YR I   +   L   GL  +EIG  Q+  +  +  + 
Sbjct: 209 LMPEVREHEPVRALDGGDDGLNAYRYICSRLPFLLVDGGLAVLEIGIGQEEALRALASTN 268

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            L +V+   D  G  R ++ 
Sbjct: 269 VLRVVDVKADLAGIARAVVL 288


>gi|153801641|ref|ZP_01956227.1| hemK protein [Vibrio cholerae MZO-3]
 gi|124122818|gb|EAY41561.1| hemK protein [Vibrio cholerae MZO-3]
          Length = 286

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L  DG    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|300313562|ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum
           seropedicae SmR1]
 gi|300076347|gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 277

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 11/252 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC    L+  Q+I   +  L   +   L   + R L+ E I  I+G R+FY + L +S 
Sbjct: 29  LLCHALRLTRVQLITQSERQLSAAEAETLAALLARRLRGEPIAYIVGQREFYGLDLRVSP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRP+TELLV+ AL   LP+         LD+GTG+GA+ +A+    P  +   +D 
Sbjct: 89  DVLIPRPDTELLVELALE-RLPQGGS-----ALDMGTGSGAIAVAIAHTRPDAQVTALDA 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL IA+ NA T+ V  R   L+SDW+ +++    FD+IVSNPPYI +  +     ++
Sbjct: 143 SPAALAIARENASTHQVRVRL--LESDWYGALDADQAFDLIVSNPPYIVAGDIHLSQGDL 200

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R F+P  +L    DGLS  RTI +G   HL   G   +E GY+Q   V  +        V
Sbjct: 201 R-FEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHGYDQAAAVRALLTGGGWREV 259

Query: 248 NAFKDYGGNDRV 259
            +++D  G +RV
Sbjct: 260 QSWRDLAGIERV 271


>gi|309379284|emb|CBX22057.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 273

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  +LGWR+FY  R  ++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G +  F      WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVCASDISPSALETARKNAADLGAAVEF--AHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDEHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|206578511|ref|YP_002237909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella pneumoniae 342]
 gi|206567569|gb|ACI09345.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella pneumoniae 342]
          Length = 282

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLIGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLPAVP----CRILDLGTGTGAIALALASERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++      
Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YLDVATCRDYGDNERLTL 272


>gi|39998193|ref|NP_954144.1| HemK family modification methylase [Geobacter sulfurreducens PCA]
 gi|39985139|gb|AAR36494.1| modification methylase, HemK family [Geobacter sulfurreducens PCA]
 gi|298507131|gb|ADI85854.1| peptide chain release factor methyltransferase [Geobacter
           sulfurreducens KN400]
          Length = 284

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 126/256 (49%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L    GL    + V+ D  L+  +       + R  K E +  ILG ++F  +  
Sbjct: 32  ETEWLLSAALGLDRVGLYVNFDKPLNPEELAACRGLVARRAKREPLQYILGTQEFCGLDF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE++V+ AL              +LD+G G+G + +AL K+ P  + V
Sbjct: 92  VVTPSVLIPRHDTEVIVEEALR------RAPHAAAVLDIGVGSGCIAVALAKQLPHAQVV 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           GV+ S  A+ +A+ NA  +G   R    +   F  + +  FD+IVSNPPYI +  ++ L 
Sbjct: 146 GVEQSPGAIALAQRNAERHGA--RVTLFEGSLFEPLGDQRFDLIVSNPPYIPTADLEALQ 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+++PR +LDGG DGL  YR I      +LN  G   VE+G  Q   V+ +F     
Sbjct: 204 PEVREYEPRAALDGGSDGLDFYRLIVPAAPEYLNPGGWLMVELGIGQAETVLGMFSRTGF 263

Query: 245 FLVNAFKDYGGNDRVL 260
                 +D  G DRV+
Sbjct: 264 CDCFTAQDPNGIDRVV 279


>gi|301060380|ref|ZP_07201243.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [delta proteobacterium NaphS2]
 gi|300445576|gb|EFK09478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [delta proteobacterium NaphS2]
          Length = 299

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 118/223 (52%), Gaps = 4/223 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R L+HE +  I G ++F+++   ++     PRPETE+LV+ A+  +    E+   +R 
Sbjct: 66  IKRRLEHEPLQYITGKQEFWSLSFQVNPHVLIPRPETEILVEQAMDLATALTEEGTQLRF 125

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + +A+ K+ P       DIS KAL++A++NA  +GVS     +Q D F  +
Sbjct: 126 LDLGTGSGVIAVAMAKQIPESLVFATDISGKALDVARANAQAHGVSSSITFIQGDLFEPL 185

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +  F +I SNPPY+ +  +  L  E+  ++PR +LDGG DG+ + + I     R L 
Sbjct: 186 MLEKPAFHLIASNPPYVCTHEISGLQSEIALYEPRAALDGGKDGMDYLKEIIKQAPRFLL 245

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260
             G   +E+   Q    +       ++      +DY  + RV+
Sbjct: 246 PGGWLLLEMSPFQVEKALFALAETDVYQNTKPVQDYSHHQRVI 288


>gi|299065548|emb|CBJ36719.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum CMR15]
          Length = 306

 Score =  125 bits (314), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 127/260 (48%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+    
Sbjct: 42  EARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFGRMF 101

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ AL     RI+ RDV  +LDLGTG+G  AV +AL +     +
Sbjct: 102 QVTPAVLIPRPDTELLVEQALD----RIDDRDVPAVLDLGTGSGIIAVTIALARRD--AR 155

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178
               D S  AL +A  NA   G +     L  DW++++       +FD+IVSNPPYI S 
Sbjct: 156 VWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAST 214

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +
Sbjct: 215 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 273

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                   V   +D  G+DR
Sbjct: 274 LADAGFADVFTAQDLAGHDR 293


>gi|296113366|ref|YP_003627304.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
 gi|295921060|gb|ADG61411.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
 gi|326559851|gb|EGE10251.1| protein methyltransferase HemK [Moraxella catarrhalis 7169]
 gi|326560801|gb|EGE11168.1| protein methyltransferase HemK [Moraxella catarrhalis 103P14B1]
 gi|326563538|gb|EGE13797.1| protein methyltransferase HemK [Moraxella catarrhalis 12P80B1]
 gi|326569661|gb|EGE19713.1| protein methyltransferase HemK [Moraxella catarrhalis BC1]
 gi|326570144|gb|EGE20189.1| protein methyltransferase HemK [Moraxella catarrhalis BC8]
 gi|326570883|gb|EGE20907.1| protein methyltransferase HemK [Moraxella catarrhalis BC7]
 gi|326574432|gb|EGE24374.1| protein methyltransferase HemK [Moraxella catarrhalis 101P30B1]
 gi|326575975|gb|EGE25898.1| protein methyltransferase HemK [Moraxella catarrhalis CO72]
          Length = 295

 Score =  125 bits (314), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 126/229 (55%), Gaps = 10/229 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-----LPR 92
           +T  I++    + +  + G + F+     +++ T  PR +TE+LV++ L ++     + +
Sbjct: 65  ITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNAHTLIPRADTEILVETILNYAKAQQKIRQ 124

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            + +++V ILDLGTGTG + + L  E  F + V VDIS +AL++A+ N   + ++ R   
Sbjct: 125 TDNKNLVNILDLGTGTGCIGITLALELEFAQVVLVDISSEALKVAEQN--NHRLNARCQL 182

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           LQS W   V G FD+IVSNPPYI+      + L+    +P  +L    DGL+  R I + 
Sbjct: 183 LQSHWLQKVSGQFDIIVSNPPYIKENDEHLVNLK---HEPITALVAAEDGLTDIRHIIET 239

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              +L   GL ++E G++Q   V  ++ S     V   +DYGGNDRV L
Sbjct: 240 GRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGYLDVYTIQDYGGNDRVTL 288


>gi|282850387|ref|ZP_06259766.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella parvula ATCC 17745]
 gi|282579880|gb|EFB85284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella parvula ATCC 17745]
          Length = 289

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 123/218 (56%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I+G +DF  +   ++     PRP+TE L++  L  + P   K   VRILD+ T
Sbjct: 71  KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163
           G G + L+LL   P   GVG+DIS  AL +A+ N  +  +S+R   ++SD F ++ G   
Sbjct: 127 GPGTILLSLLHYLPNASGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKE 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +  +  L  +V + +P I+L GG DGL  YR +A     +LN +G  
Sbjct: 187 KFDLIVSNPPYIRTGDLKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRV 245

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           + E+G++Q  +V  +  E+ +   +    D GG++RV+
Sbjct: 246 AFEVGFDQAEEVGALLQETGQYSNIQFIADLGGHNRVV 283


>gi|288934822|ref|YP_003438881.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella variicola At-22]
 gi|288889531|gb|ADC57849.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella variicola At-22]
          Length = 282

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLPAVP----CRILDLGTGTGAIALALASERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++      
Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YLDVATCRDYGDNERLTL 272


>gi|327538346|gb|EGF25019.1| modification methylase, HemK family [Rhodopirellula baltica WH47]
          Length = 296

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 5/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G    ++    D V ++ QR      + R  +   + +++G+R+FY++ +
Sbjct: 34  DAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYSISI 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +  +   PRPETE LV  A+     R+  R    +LD+GTG+GA+ +A+ K  P  +  
Sbjct: 94  RVDENVLVPRPETEHLVIEAIDQIKGRMSDRPSPTVLDIGTGSGAIAVAIAKSLPKTQVT 153

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183
            VDIS  AL+IAK N     +S+R   LQSD F  +E    FDVI SNPPYI     D L
Sbjct: 154 AVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEYDEL 213

Query: 184 GLEVRDFDPRISLDGGIDGLSHY-RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              VR+F+PR +L  G DG     R + D V R LN  G   +E+          + E  
Sbjct: 214 PTTVREFEPRGALLSGPDGTEIIARLLTDSVQR-LNDGGQLIIELSPMIAGVCKTLAEQN 272

Query: 243 KLFL-VNAFKDYGGNDRVL 260
             +  ++  KD  G++R+L
Sbjct: 273 GGYQEIHLIKDLAGHERIL 291


>gi|260436445|ref|ZP_05790415.1| modification methylase, HemK family [Synechococcus sp. WH 8109]
 gi|260414319|gb|EEX07615.1| modification methylase, HemK family [Synechococcus sp. WH 8109]
          Length = 295

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 107/208 (51%), Gaps = 10/208 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   V L  S     PR ETELLVD A++    + +     R  DLGTG+GA+ +AL 
Sbjct: 87  WRD---VLLESSPAALIPRQETELLVDLAMS----QFKTTPPARWADLGTGSGAIAVALA 139

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
           +  P   G GVD+S  AL++A+ N                W+S ++   G  D++VSNPP
Sbjct: 140 RAWPTAPGHGVDLSPDALQLAEHNLQGCAPHHNCSLHLGSWWSPLKSWWGSLDLVVSNPP 199

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI   +VD L   VRD +P ++L GG DGL   RT+ DG    L+  G   +E  Y+Q V
Sbjct: 200 YIPCAVVDGLEAVVRDHEPHLALLGGADGLDAIRTVVDGAPTGLSPGGWLLLEHHYDQSV 259

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            V+++ +   L  V A  D  G  R  L
Sbjct: 260 QVIQLLQDAGLVEVRAAADLEGTLRFAL 287


>gi|254482780|ref|ZP_05096017.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [marine gamma proteobacterium HTCC2148]
 gi|214036861|gb|EEB77531.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [marine gamma proteobacterium HTCC2148]
          Length = 277

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 8/219 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  + G R+F+++ L ++  T  PRPETE LV+ AL   LP     D    
Sbjct: 58  LQRRYRGEPVAYLTGHREFWSLDLAVAPSTLIPRPETETLVEWALELPLP-----DDTVA 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTGA+ LAL  E P ++  G D++  A+++A +NA+ N ++ R + +QSDWF  V
Sbjct: 113 LDLGTGTGAIALALANEKPGWRVCGADVNIDAVQLASNNALANNLA-RVEFIQSDWFDGV 171

Query: 162 E-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           E  LF+++VSNPPY+E         +VR F+P  +L     GL+    I      +L   
Sbjct: 172 EDKLFNLLVSNPPYVEEGDAHLSEGDVR-FEPLEALVAADRGLADLDHIVKSSPNYLQTR 230

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   +E G++Q   V  +   R    V   +D  G +R+
Sbjct: 231 GWLLLEHGFDQAPAVRELLVRRGFKGVETRQDLAGQERI 269


>gi|94496667|ref|ZP_01303243.1| protein chain release factors methylase subunit [Sphingomonas sp.
           SKA58]
 gi|94424027|gb|EAT09052.1| protein chain release factors methylase subunit [Sphingomonas sp.
           SKA58]
          Length = 244

 Score =  125 bits (313), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 124/226 (54%), Gaps = 14/226 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I+G RDF+ + L ++ DT  PRP++E L+++A+ +       +    +
Sbjct: 29  IARRAAGEPVAHIIGMRDFWTITLAVTPDTLIPRPDSETLIEAAVDY----FGAQGPQTV 84

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ LA L + P  +G+G+D S  AL +A+ NA    +  R +    DW + V
Sbjct: 85  LDLGTGSGALLLAALAQWPQARGLGIDASAGALLVARGNAARLDLDARAEFRAGDWATGV 144

Query: 162 EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           EG+FD+++ NPPYI   E +  D L       +P  +L  G+DGL  YR IA  + R + 
Sbjct: 145 EGVFDLLLINPPYIGVDEPLSGDVL------REPASALFAGVDGLDDYRRIAPDLPRLIA 198

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             G+ ++EIG+ Q   V  +  ++ L  V   +D  G DR ++  R
Sbjct: 199 PGGMAAIEIGHRQGDSVGALVAAQGLN-VAIRRDLAGLDRCVIATR 243


>gi|222053789|ref|YP_002536151.1| modification methylase, HemK family [Geobacter sp. FRC-32]
 gi|221563078|gb|ACM19050.1| modification methylase, HemK family [Geobacter sp. FRC-32]
          Length = 284

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 10/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   LC V GL    + V+ D  L  ++       I R  + E +  ILG ++F  +  
Sbjct: 31  ESEWMLCAVLGLDRMGLYVNFDKPLTPKELADYRGMIARRGRREPLQYILGSQEFMGLDF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE+LV+ A+     R  K     ILD+GTG+G + ++L K  P     
Sbjct: 91  AVAPAVLIPRHDTEVLVNEAVK----RAGKTS--SILDVGTGSGCISISLAKALPGAIIT 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
           GVD S  AL +A+ N  T+GV+ +   L    F  V+G  F ++VSNPPYI S  +  L 
Sbjct: 145 GVDTSVDALAVAEKNCNTHGVAVKL--LHGSLFEPVQGQQFHMVVSNPPYIPSDDLKTLQ 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESRK 243
            EVRD++P  +LDGG DGL  YR I    + +L   G   +E+G  Q   V ++ F++ K
Sbjct: 203 PEVRDYEPAGALDGGKDGLDFYRQIVAAATDYLVCGGWLLLEVGIGQAEQVRKLFFDNGK 262

Query: 244 LFLVNAFKDYGGNDRVL 260
              V A KD    +RV+
Sbjct: 263 FAEVFAAKDTADIERVV 279


>gi|325847860|ref|ZP_08170082.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480878|gb|EGC83931.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 263

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 8/209 (3%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G  +FY + L +      PR ETE+LVD  +   +    K+D  +ILD+G+G+GA+ LA
Sbjct: 62  IGKWNFYGLDLLVDKRALIPRYETEILVDMIINDKV----KKD--KILDIGSGSGAISLA 115

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L       K +G+DIS  A+ ++K N   N   +  +  +SD FS+VEG FD+IVSNPPY
Sbjct: 116 LSYNLKNSKVLGIDISKDAINLSKENK-KNLSIKNVEFKESDIFSNVEGKFDIIVSNPPY 174

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I     + L  ++  ++P+ +L GG DGL  YR I     + LNK+G   +EIGY+QK  
Sbjct: 175 INKEDFENLDKKLS-YEPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNP 233

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++ + +      + A+KD+   DR+++ C
Sbjct: 234 IINLLKEEGYKDIRAYKDFNDFDRIIIAC 262


>gi|295677814|ref|YP_003606338.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1002]
 gi|295437657|gb|ADG16827.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1002]
          Length = 295

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V G    Q+I   +  L+            R +  E + +++G R+F+ +  
Sbjct: 31  EARILLTHVLGWRRTQLITRSEEPLERASVECYRALEARRMAGEPVAQLVGAREFFGLEF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV++ALA     IE R   R+LDLGTGTGA+ +A+    P     
Sbjct: 91  EVTPHVLIPRPETELLVETALAA----IEARPRPRVLDLGTGTGAIAVAIASMRPEAHVW 146

Query: 126 GVDISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
            +D S  AL +A  N      A   G +  F  L SDW+ S++    FD IVSNPPYI S
Sbjct: 147 ALDRSADALAVAARNGARLLDAKRPGGAVTF--LHSDWYGSLDTALRFDAIVSNPPYIAS 204

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  R I  G    L  DG+  +E GY+Q   V  
Sbjct: 205 GDPHLAEGDLR-FEPRGALTDEADGLSAIRAIIAGAPERLAADGVLWIEHGYDQAEAVRA 263

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  +R    V + +D  G +R+
Sbjct: 264 LLGARGFAEVRSERDLAGIERI 285


>gi|37525988|ref|NP_929332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785418|emb|CAE14364.1| Protein methyltranferase HemK (Protein-glutamine
           N-methyltransferase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 282

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 12/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VT  S   ++   ++ L   Q   L   + R +K E I  I G R+F+++ 
Sbjct: 22  RDAEILLGFVTHHSRTYLLAFGETQLAPEQFSQLEALLARRVKGEPIAYITGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           L +S  T  PRP+TE LV+ AL   SL         RILDLGTGTGA+ LA+  E P  +
Sbjct: 82  LNVSPATLIPRPDTECLVEKALERLSL------TPCRILDLGTGTGAIALAIASERPDCR 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
             GVDI+  A+ +A+ NA    + +  D L S+WF S+    F +IVSNPPYI+      
Sbjct: 136 VTGVDINPDAVMLAQGNAEKLKI-QNVDFLLSNWFFSLNNQQFGMIVSNPPYIDETDPHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKVDVVRIFES 241
              +VR F+P  +L     G++   TI D +SRH L   G   +E G+ Q   +  +F  
Sbjct: 195 SQGDVR-FEPDSALIAAKQGIADLNTIID-LSRHFLLPGGWLLLEHGWKQGNVIRSLFSE 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V  F+DYGGN+R+
Sbjct: 253 SGYRQVATFQDYGGNERI 270


>gi|225677173|ref|ZP_03788171.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590797|gb|EEH12026.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 279

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 140/260 (53%), Gaps = 8/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D    +  V G+    +I++  D V  +++  F      R+ ++  I +I+G R+F++  
Sbjct: 26  DCEIIMQHVLGVERSFIIMNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E L+ + L +  P  ++R  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGCLLISVLSEHEYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G + S +A ++A  N   + +  R     S W +   G FD+I+SNPPYI+   +  L 
Sbjct: 142 IGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +PRI+LDGGIDGL+ Y +I   + + L K+G   +EIG +Q  D+ +I  S KL
Sbjct: 201 AEVQK-EPRIALDGGIDGLNCYLSIFPILKKCLKKNGFAILEIGEDQN-DIDKIIPSYKL 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R ++  +
Sbjct: 259 AFQEYVHDLAGMKRCIVMQK 278


>gi|91785344|ref|YP_560550.1| modification methylase HemK [Burkholderia xenovorans LB400]
 gi|91689298|gb|ABE32498.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 286

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D  L     +R+    A  R    E + +++G R+F+ +
Sbjct: 25  EARILLTHVLGWRPTQLITRSDEPLGAELVERYRALEA--RRAAGEPVAQLVGAREFFGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  +
Sbjct: 83  DFEVTPHVLIPRPETELLVETALAA----LENLSRPRVLDLGTGTGAIAVAIASMRPDAQ 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S +AL +A  NA     ++R        QSDW+ S++    FDVIVSNPPYI S
Sbjct: 139 VWALDHSAEALAVATRNAARLLDAKRPGGAVALTQSDWYDSLDAALRFDVIVSNPPYIAS 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  R I  G    L   G+  +E GY+Q   V +
Sbjct: 199 GDPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVLWIEHGYDQAEAVRK 257

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  +R    V + +D  G +R+
Sbjct: 258 LLTARGFTQVRSERDLAGIERI 279


>gi|330828703|ref|YP_004391655.1| protein-(glutamine-N5) methyltransferase [Aeromonas veronii B565]
 gi|328803839|gb|AEB49038.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Aeromonas veronii B565]
          Length = 283

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 15/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC + G     ++  P+  LD  Q+  L   + R L  E I  ++G R+F+++ L
Sbjct: 23  DADVLLCHLLGCRRSYLMTWPEHELDAAQQATLQGWLARRLNGEPIAHLVGEREFWSLPL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE+LV+ AL     RI +     +LDLGTGTGA+ LAL  E P     
Sbjct: 83  KVSPATLIPRPDTEVLVEQALT----RIPQGPCA-VLDLGTGTGAIALALKSERPEIDVW 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESV 178
            VD    A  +A+ N+V  G+    +     WF  +          F VIVSNPPYI+  
Sbjct: 138 AVDRMADAAALARENSVALGLP--IEVRDGSWFEPLGEPDRDETPRFAVIVSNPPYIDGA 195

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  +VR F+PR +L     GL+  R I      +L  DG   +E G++Q   V ++
Sbjct: 196 DPHLEQGDVR-FEPRSALVADDAGLADIRHIVAHAPAYLLADGWLLLEHGWDQGEAVRQL 254

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
                   V   +DYG NDRV L
Sbjct: 255 LRDGGYREVATVRDYGDNDRVTL 277


>gi|197249709|ref|YP_002146254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197213412|gb|ACH50809.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 277

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-QLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YMDVETCRDYGGNERV 270


>gi|332360426|gb|EGJ38237.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK355]
          Length = 276

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA   G++  F  +QSD   +++G F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALSLAAENAQNCGLNPTF--VQSDCLDTIQGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPNMALFAEEDGYAVYRKIAEQAGGYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGEGVAELL--KKFFPHKRIRVLKDQFGKDRMV 271


>gi|322374350|ref|ZP_08048864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C300]
 gi|321279850|gb|EFX56889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C300]
          Length = 278

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 131/260 (50%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      + + ++ F+     +   H+    I+G  DF+ ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVTEAEKQFVEEIFQQLASHKPAQYIIGQADFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPETE LV+  LA +       D +++LD+GTG+GA+ L L K  P +  
Sbjct: 82  LKVDERVLIPRPETEELVELILAEN-----PEDKLKVLDIGTGSGAIALGLAKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  NA    ++  F   +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQDALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F  RK 
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALF--RKY 252

Query: 245 F---LVNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272


>gi|226940812|ref|YP_002795886.1| HemK1 [Laribacter hongkongensis HLHK9]
 gi|226715739|gb|ACO74877.1| HemK1 [Laribacter hongkongensis HLHK9]
          Length = 276

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 15/258 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+H  L + +GLS  + I  P+  + +   QRF    A  R L  E +  +LG R+F+  
Sbjct: 19  DAHLLLEQASGLSRTRQITWPEQEVPEETAQRFLALAA--RRLAGEPVAYLLGVREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ DT  PRPETE LV+ AL    P        R+LDLGTG+GA+ + +  E P  +
Sbjct: 77  DFRVTPDTLIPRPETEHLVEFALTHLPP------AGRMLDLGTGSGAIAVTVACERPDAR 130

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
              +D+S  AL +A+SN        R+  L+SDWFS++  E  F++IVSNPPYI +    
Sbjct: 131 VTALDVSAAALAVARSNGQHLQAQVRW--LESDWFSALPAEERFELIVSNPPYIAAGDPH 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L    DGL   + +A      +   G  +VE GY+Q      +F  
Sbjct: 189 LEQGDLR-FEPASALTDFADGLEALQVLATQACHFVTPGGWLAVEHGYDQGKACRALFAG 247

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V+   D  G DRV
Sbjct: 248 AGWLSVSTLPDLAGLDRV 265


>gi|149174662|ref|ZP_01853287.1| hemK protein [Planctomyces maris DSM 8797]
 gi|148846356|gb|EDL60694.1| hemK protein [Planctomyces maris DSM 8797]
          Length = 309

 Score =  125 bits (313), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 15/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L         ++  + + V+ +++R  +   + R    E +  ++G R+F+ +  
Sbjct: 47  DTEVLLAHARNCERIRLYTNYEDVVTEQERALMRQLVQRRANSEPVAYLVGNREFFGLDF 106

Query: 66  TLSSDTFEPRPETELLV----DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  +   PRP+TE LV    D A   + P I        LDL TG+G + ++       
Sbjct: 107 YVDKNVLVPRPDTETLVIELVDEAQKLTNPFI--------LDLCTGSGCIAISAAANCHN 158

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            K    DIS  AL IA+ NA +N +S +   L SD F  +    LFD+IVSNPPYI    
Sbjct: 159 AKFQATDISEPALAIAQKNAASNELSNQIQFLLSDCFEQIPPGTLFDIIVSNPPYIPDAE 218

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +VR  +PR++L GG DGL  YR I     R+L   GL  +E    Q+ D++ +F
Sbjct: 219 IEQLEKDVRQHEPRLALSGGKDGLDFYRKIIQEAGRYLKDQGLLMLEFSPEQEADLLALF 278

Query: 240 ESRKLFL-VNAFKDYGGNDRVLL 261
           ++   +  V    D  G  RV++
Sbjct: 279 KATGEYTNVRVKADLAGRARVII 301


>gi|184158673|ref|YP_001847012.1| methylase of polypeptide chain release factor [Acinetobacter
           baumannii ACICU]
 gi|332874368|ref|ZP_08442279.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6014059]
 gi|183210267|gb|ACC57665.1| Methylase of polypeptide chain release factor [Acinetobacter
           baumannii ACICU]
 gi|322507516|gb|ADX02970.1| Methyl transferase [Acinetobacter baumannii 1656-2]
 gi|323518588|gb|ADX92969.1| methylase of polypeptide chain release factor [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332737447|gb|EGJ68363.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6014059]
          Length = 271

 Score =  124 bits (312), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 114/217 (52%), Gaps = 12/217 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            GY+Q   V  +F       +   +DYG NDRV L C
Sbjct: 233 HGYDQGQAVRNVFAEHGFSEIKTIQDYGQNDRVTLAC 269


>gi|156741368|ref|YP_001431497.1| HemK family modification methylase [Roseiflexus castenholzii DSM
           13941]
 gi|156232696|gb|ABU57479.1| modification methylase, HemK family [Roseiflexus castenholzii DSM
           13941]
          Length = 289

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 12/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNV 63
           D+   L    G S  +V+    +++ DD  + F   A+V R    E +  + G ++FY +
Sbjct: 31  DAEILLAHTLGWSRARVLARLQETIPDDALQTF--RALVERRAAREPVAYLTGRKEFYGL 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRPETE LVD+AL ++       D + I D+GTG+G + + L +  P   
Sbjct: 89  EFVVDRRVLVPRPETEALVDAALEWARQHYSPHDTLLIADIGTGSGCIAIVLARHLPNAV 148

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+S  AL +A+ NA  +GV+ER   L  D  + +    D+ VSNPPY    I++ +
Sbjct: 149 VYATDLSPDALAVARQNAELHGVAERITLLCGDLLAPLPQAVDLAVSNPPY---TILNEI 205

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              VR  +P ++LDGG DGL+ YR +     + L   G   +EIG  Q   V  +  +R+
Sbjct: 206 DAGVRLHEPHLALDGGSDGLAVYRRLLATAPQALRPGGALMLEIGATQAEAVTAL--ARQ 263

Query: 244 LF---LVNAFKDYGGNDRVLL 261
            F    V+  +D  G DRV++
Sbjct: 264 AFPAAAVHMLRDLAGWDRVVV 284


>gi|253583343|ref|ZP_04860541.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium varium ATCC 27725]
 gi|251833915|gb|EES62478.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium varium ATCC 27725]
          Length = 369

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 118/221 (53%), Gaps = 6/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I+R    + +  +LG  +FY     +      PR +TE+LV+    F L  +E     ++
Sbjct: 147 ILRGKNRKPLQYLLGEWEFYGYPFKVDERVLIPRSDTEILVEQC-KFILNELENP---KV 202

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+GA+ + L KE P    +G DIS  ALE+A++N   N  +E    ++SD FSS 
Sbjct: 203 LDIGTGSGAIAVTLGKECPNSVIIGADISEGALEVAEANREMNK-AENVKFMKSDVFSSF 261

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + + FD I+SNPPYI     + L  EV  ++P  +L    +G   Y  I+   S +LNK 
Sbjct: 262 KDMKFDFIISNPPYIPLEEYNKLMPEVLKYEPSSALTDNGNGYYFYSKISKEASDYLNKG 321

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G  + E+GYNQ   V  + E     +    KDYGG DRV++
Sbjct: 322 GFLAFEVGYNQAETVKELMEENGFDIFAIVKDYGGIDRVVI 362


>gi|257482008|ref|ZP_05636049.1| hemK protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 277

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|34499039|ref|NP_903254.1| HemK protein [Chromobacterium violaceum ATCC 12472]
 gi|34104889|gb|AAQ61246.1| HemK protein [Chromobacterium violaceum ATCC 12472]
          Length = 254

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 122/248 (49%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+   ++  P+  L +           R L  E I  +LG R+FY     +S     PR
Sbjct: 9   GLTHATILGHPERELPEETASAFDALAARRLAGEPIAYLLGSREFYGRDFRVSPAVLIPR 68

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+ AL+    R+++    R +DLGTG+G + + L  E+P +    VD+S +AL 
Sbjct: 69  PETEHLVEQALS----RVDRTMPARAVDLGTGSGIIAITLALEAPDWSLGAVDVSAEALA 124

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +A+ NA  + +  R D     WF  +  +  F++IVSNPPYIE         ++R F+PR
Sbjct: 125 VARGNA--DALGARVDFRLGSWFGPLDADARFELIVSNPPYIERGDHHLAEGDLR-FEPR 181

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L    DGL+  R IA G    L   G   VE GY+Q   V  +F    L  V    D 
Sbjct: 182 GALTDEADGLACLREIAAGAPGRLADGGWLMVEHGYDQGEAVRGLFADAGLLEVETIVDL 241

Query: 254 GGNDRVLL 261
            G DR+ +
Sbjct: 242 AGQDRITI 249


>gi|218708756|ref|YP_002416377.1| hypothetical protein VS_0753 [Vibrio splendidus LGP32]
 gi|218321775|emb|CAV17731.1| Protein hemK homolog [Vibrio splendidus LGP32]
          Length = 290

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 129/272 (47%), Gaps = 25/272 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173
           G+D+  +A ++A  NA    +TN        L   WF  +  +        F +IVSNPP
Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSVNSEEKAVKFSLIVSNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YIE         +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q +
Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGL 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263
            V  I ++     V   KDYGGNDRV L  +C
Sbjct: 258 AVREIMQALGYLDVVTEKDYGGNDRVTLGRYC 289


>gi|330988604|gb|EGH86707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 277

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|304440461|ref|ZP_07400350.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371213|gb|EFM24830.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 267

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 125/226 (55%), Gaps = 8/226 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  V  +S   +I++ +  L+  +   + + + R    E +  ILG  +FY + +
Sbjct: 25  ESRRILMEVLDVSMTYLILNEEQELNKEKEEEIIDILNRRKHGEPLQYILGHSEFYGLDI 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L      PRP+TE+ V++ L     R++  D  + L+LG G+GAV  ++ K S   K  
Sbjct: 85  LLKGKVLIPRPDTEVSVENILK----RLKSGD--KFLELGVGSGAVICSVAKNSDA-KCY 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS  ALE  K N + N   +  +   SD F +VEG +D+I SNPPYI+S  +  L +
Sbjct: 138 GVDISEDALECTKLN-IENLNLKNVEVKYSDLFENVEGKYDIIYSNPPYIKSHEILNLQV 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           E+ D++PR++LDGG DGL  Y+ I      +LN+ G    EIG++Q
Sbjct: 197 EITDYEPRLALDGGEDGLDFYKKIISEYRDYLNEGGYLIFEIGHDQ 242


>gi|289627917|ref|ZP_06460871.1| hemK protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|320325691|gb|EFW81752.1| hemK protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327390|gb|EFW83404.1| hemK protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330868899|gb|EGH03608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 277

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|330881881|gb|EGH16030.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 277

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|56413304|ref|YP_150379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197362229|ref|YP_002141866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56127561|gb|AAV77067.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093706|emb|CAR59178.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 277

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 134/256 (52%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRRQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    + +    LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-QNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|270261429|ref|ZP_06189702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia odorifera 4Rx13]
 gi|270044913|gb|EFA18004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia odorifera 4Rx13]
          Length = 277

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG +   ++   ++VL  +++  L   + R  + E +  ++G R+F++
Sbjct: 20  ARRDAEILLGFVTGRARTFLMAFGETVLTPQEQEQLERLLARRERGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ AL    P         ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLSVSPATLIPRPDTECLVELALERLPP-----SPCTILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
              GVD+  +A+ +A+ NA    +      LQ  WF  + G  F +I SNPPYI++    
Sbjct: 135 AVTGVDLQPEAVALAQHNAQKLAIGNA-QFLQGSWFEPLAGQTFVLIASNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I      +L   G   +E G+ Q   V  + ++
Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLAAIVQQAPHYLQPQGWLLLEHGWQQGESVRALLQA 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V   +DYG NDRV
Sbjct: 253 AGFISVATRRDYGDNDRV 270


>gi|323492376|ref|ZP_08097529.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
 gi|323313423|gb|EGA66534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
          Length = 286

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 11/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSFLLTWPDKILPSSQLDAFQALLERRLSGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +L      +   ILDLGTGTGA+ LAL  E P  +  
Sbjct: 89  KVSPSTLIPRPDTERLVEIALDKAL-----NNQGDILDLGTGTGAIALALASELPQRQIW 143

Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182
           GVD+  +A ++A+SNA    + + RF  L   WF  ++    F +IVSNPPYIE      
Sbjct: 144 GVDLKSEAQQLAQSNAKALKLHNTRF--LAGSWFEPIDDGTEFALIVSNPPYIEKEDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+  + IA     +L K G    E GY Q   V  +  S 
Sbjct: 202 TRGDVR-FEPLSALVADEKGLADIKHIATQARSYLAKQGWLMFEHGYEQGEAVRELLISL 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V  +KDYG NDRV +
Sbjct: 261 GYDQVATYKDYGDNDRVTI 279


>gi|115375811|ref|ZP_01463063.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1]
 gi|310822928|ref|YP_003955286.1| hypothetical protein STAUR_5696 [Stigmatella aurantiaca DW4/3-1]
 gi|115367199|gb|EAU66182.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1]
 gi|309396000|gb|ADO73459.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 292

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 121/241 (50%), Gaps = 7/241 (2%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           ++ VD D  L   +       I R +  E    + G ++FYN    + +    PRPETEL
Sbjct: 44  RLYVDLDRPLSKEELAAYRALIERRMAGEPTQYLTGAKEFYNRPFKVDARVLIPRPETEL 103

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV++AL  +LP   K      LD+  G+G + ++L  E P    +  D+S  A  +A+ N
Sbjct: 104 LVEAAL-RALP---KDAPSHALDVCAGSGCIAISLAAERPQTSVLATDLSPGACALAREN 159

Query: 141 AVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A T GVS R   LQ D F+ V  +  F ++VSNPPYI S  +  L +EVR  +P ++LDG
Sbjct: 160 AETLGVSSRVTFLQGDLFAPVPADARFALVVSNPPYIASGEIPGLSVEVRR-EPHLALDG 218

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DGL   R +  G  R+L   GL ++EIG  Q   V  +  +         KD    DR
Sbjct: 219 GRDGLDLIRRVIQGARRYLAPGGLLAMEIGETQGAAVKELLHAAGYSDARVEKDLERRDR 278

Query: 259 V 259
           +
Sbjct: 279 L 279


>gi|258592987|emb|CBE69298.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [NC10 bacterium 'Dutch sediment']
          Length = 297

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 134/276 (48%), Gaps = 17/276 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +   +G+   Q I+DP+  +   +   L + + R    E +  ILG ++F+++ L
Sbjct: 16  DAAYLMEAASGIPRWQFILDPEQPIPLDRSGLLESMVSRREAREPVAYILGVKEFWSLLL 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-----------VRILDLGTGTGAVCLA 114
            +S D   PRP+TE LV++AL     + +  +            + I+DLGTG GAV LA
Sbjct: 76  AVSPDVLIPRPDTETLVETALDKISVKCQGSETQHSTLNTRHSQLVIVDLGTGCGAVALA 135

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVE--GLFDVIV 169
           L  E P      +D S  A  IA  N  T G++ R   +Q D    F +++  G  D+IV
Sbjct: 136 LAVELPRALIYAIDRSPGACRIAGRNIDTLGLTNRVRCVQGDLLEPFRTIDAGGGCDLIV 195

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI S     L  E+  ++P  ++DGG DGL +YR I +    +L   G    E+G 
Sbjct: 196 SNPPYIPSAACRVLAPEITAYEPVEAIDGGPDGLRYYRRIIEAAPAYLRDGGWLVFEVGD 255

Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
            Q   V+ +    + F      +D  G DRV+   R
Sbjct: 256 GQASAVMELIRKTEGFGPAEVRQDMAGRDRVVCAPR 291


>gi|170683182|ref|YP_001743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218699919|ref|YP_002407548.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|170520900|gb|ACB19078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli SMS-3-5]
 gi|218369905|emb|CAR17680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli IAI39]
          Length = 277

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLAHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDCMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|325122702|gb|ADY82225.1| methyl transferase [Acinetobacter calcoaceticus PHEA-2]
          Length = 271

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 10/216 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEILVETVLNLNLP-----NTANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           GA+ LAL  E P +     DI    LE+AK NA  + + +R       WF ++E   FD+
Sbjct: 118 GAIALALASERPDWFVTATDIYVPTLEVAKENAQVHNL-QRVKFACGAWFDALEPQKFDL 176

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E 
Sbjct: 177 IVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKDWLKPQGWIALEH 233

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           GY+Q   V  IF       +   +DYG NDRV L C
Sbjct: 234 GYDQGQAVRNIFAEHGFSEIRTIQDYGQNDRVTLAC 269


>gi|148546008|ref|YP_001266110.1| HemK family modification methylase [Pseudomonas putida F1]
 gi|148510066|gb|ABQ76926.1| modification methylase, HemK family [Pseudomonas putida F1]
          Length = 276

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 8/214 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG + F+ + L ++  T  PRP+TELLV++AL      ++     ++LDLGTGT
Sbjct: 65  EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167
           GA+ LAL  E P ++   VD   +A  +A+ N    G++     L S WF S+ G  FD+
Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAGERFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI +     +  +VR F+P  +L  G DGL   R IA     HL   G   +E 
Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY+Q   V  +        V +  D GG++R+ L
Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271


>gi|254373463|ref|ZP_04988951.1| hypothetical protein FTCG_01058 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571189|gb|EDN36843.1| hypothetical protein FTCG_01058 [Francisella novicida GA99-3549]
          Length = 284

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   V  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAVTALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 YNFTHIKTVKDLNNNDR 275


>gi|58584543|ref|YP_198116.1| methylase of polypeptide chain release factor [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418859|gb|AAW70874.1| Methylase of polypeptide chain release factor [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
          Length = 311

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 7/238 (2%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D V   +++ F      R+ ++  I +I+G R+F++    ++    +PR ++E+LV +AL
Sbjct: 80  DQVSIKKEQLFWKLTKKRAERY-PISQIIGNREFWSKNFIVNRHVLDPRADSEILVSAAL 138

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            +  P   K+  + I D GTGTG + +++L E     GVG + S KA ++A  N   + +
Sbjct: 139 KY-YPN--KKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNL 195

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             R     S W +  +GLFD+I+SNPPYI    +  L  EV+  +P+I+LDGGIDGLS Y
Sbjct: 196 LGRAKMFPSSW-TECKGLFDLIISNPPYIRRDKLKDLQAEVQK-EPKIALDGGIDGLSCY 253

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +I   + R L K+G   +EIG +Q  D+ +I  S +L       D  G  R ++  R
Sbjct: 254 LSIFPILKRCLKKNGFAILEIGEDQN-DIDKIVPSYELAFQEYMYDLAGMKRCIVIKR 310


>gi|229522129|ref|ZP_04411546.1| methylase of polypeptide chain release factors [Vibrio cholerae TM
           11079-80]
 gi|229341054|gb|EEO06059.1| methylase of polypeptide chain release factors [Vibrio cholerae TM
           11079-80]
          Length = 286

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|313497100|gb|ADR58466.1| HemK family modification methylase [Pseudomonas putida BIRD-1]
          Length = 276

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 114/214 (53%), Gaps = 8/214 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG + F+ + L ++  T  PRP+TELLV++AL      ++     ++LDLGTGT
Sbjct: 65  EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167
           GA+ LAL  E P ++   VD   +A  +A+ N    G++     L S WF S+ G  FD+
Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAGERFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI +     +  +VR F+P  +L  G DGL   R IA     HL   G   +E 
Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY+Q   V  +        V +  D GG++R+ L
Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271


>gi|283850913|ref|ZP_06368199.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B]
 gi|283573836|gb|EFC21810.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B]
          Length = 303

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 6/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  +LG R+FY +   ++ DT  PRPETEL+VD ALA         +V   
Sbjct: 82  VARRGRGEPVAYLLGEREFYGLDFRVTPDTLIPRPETELIVDRALAL----FPAGNVAAF 137

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159
            DLGTG+G + + L  + P   G+ +D S  AL +A+ NA  +GV++R   +++D+    
Sbjct: 138 ADLGTGSGCLAVTLASKFPAAVGLALDRSPNALAVARENAARHGVADRLAFVEADFAALP 197

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + +G + ++VSNPPY+          EVRDF+P  +L  G  GL     +A      L  
Sbjct: 198 ARDGGYGLVVSNPPYVSQAEYGECSREVRDFEPLAALVPGETGLEAVPVVAQAAFDALAP 257

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G   VEIG+ Q  +   I  +     V   +D  G DRV+
Sbjct: 258 GGWLLVEIGWKQGGEAADILAASGFADVAVRRDLAGCDRVV 298


>gi|167625122|ref|YP_001675416.1| HemK family modification methylase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355144|gb|ABZ77757.1| modification methylase, HemK family [Shewanella halifaxensis
           HAW-EB4]
          Length = 280

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       +   PD  L+  Q F     + + L+   I  I+G R+F+++  
Sbjct: 26  DAEVMLLHVINKPRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWSLPF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE+LV++AL  +LP  E     ++LDLGTGTGA+ L+L  E   ++  
Sbjct: 86  RVNPTTLIPRPDTEILVETAL--NLPLAEN---AKVLDLGTGTGAIALSLAHERNEWQVC 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            +D    A+ +AK N   N   E+ D  QSDWF +VE   F++IVSNPPYI+        
Sbjct: 141 AIDKVEDAVALAKVNR-ANLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEHLSQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L   + G +    IA+    +L   G   +E GY Q +++         
Sbjct: 200 GDVR-FEPQSALTAPLKGFADLFHIAESARDYLAPGGYLLLEHGYQQAIELREKLIELGY 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +D+G NDR  L
Sbjct: 259 ENVATVRDFGSNDRCTL 275


>gi|229528815|ref|ZP_04418205.1| methylase of polypeptide chain release factors [Vibrio cholerae
           12129(1)]
 gi|229332589|gb|EEN98075.1| methylase of polypeptide chain release factors [Vibrio cholerae
           12129(1)]
          Length = 286

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|166032747|ref|ZP_02235576.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC
           27755]
 gi|166027104|gb|EDR45861.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC
           27755]
          Length = 299

 Score =  124 bits (311), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 129/261 (49%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG+S      +P+  + + +       + +  +   +  I G ++F     
Sbjct: 30  DAWYLLEYVTGISRASYYGNPEKNISEEEAKRYWEYLEKRARRIPLQHITGSQEFMGYEF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-- 123
            ++     PR +TE LV+ AL    P +       +LD+ TG+G + ++LLK +   K  
Sbjct: 90  LVNEHVLIPRQDTENLVEEALKVIRPDM------HVLDMCTGSGCILISLLKYAAERKHI 143

Query: 124 ----GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                VG DIS  ALE+AK NA    V   +  +QSD F +V   FD+IVSNPPYI + +
Sbjct: 144 TGGKAVGADISADALEVAKKNAQRLKVPVIW--VQSDIFENVSESFDLIVSNPPYIRTEV 201

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EV+  DP I+LDG  DGL  YR I      HLN       EIG++Q  DV ++ 
Sbjct: 202 IQGLEDEVKLHDPWIALDGHEDGLYFYRRIVSESISHLNDGAWLMFEIGHDQAEDVSKLM 261

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           ++     +   KD  G DRV+
Sbjct: 262 KNAGFCNIYVKKDLAGLDRVV 282


>gi|323351594|ref|ZP_08087248.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           VMC66]
 gi|322122080|gb|EFX93806.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           VMC66]
          Length = 276

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA ++G++  F  +QSD   +++G F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSGDALALAAENAQSSGLNLVF--VQSDCLDAIQGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKIGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           EIGY Q   V  + E       +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELLEKNFPQKRIRVLKDQFGKDRMV 271


>gi|298485682|ref|ZP_07003761.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159708|gb|EFI00750.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 277

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAHVLNSHWFSALEGRQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|317495270|ref|ZP_07953640.1| methyltransferase [Gemella moribillum M424]
 gi|316914692|gb|EFV36168.1| methyltransferase [Gemella moribillum M424]
          Length = 280

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 132/234 (56%), Gaps = 14/234 (5%)

Query: 31  DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           +D Q++F    I + +K ++ +  ++G+  FY+ +  ++SD   PR ETE LV   + + 
Sbjct: 49  EDEQKYF--QLINKHIKDDTPLSHLVGFEYFYDRKFKVTSDVLSPRMETEELVYKVIDY- 105

Query: 90  LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNG 145
              I K ++  +++LDL TG+G + + L KE   F  K +  DIS +AL +AK NA +  
Sbjct: 106 ---IRKNNLTNIKVLDLCTGSGIIGITLKKELEEFDVKILASDISSRALTVAKENASSLE 162

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
               F  ++SD FS+++  FD+IVSNPPYI       +   V ++DP ++L    +G+  
Sbjct: 163 ADISF--VESDLFSNIQDKFDIIVSNPPYIAHDDKKTIKENVLNYDPHLALFADEEGMYF 220

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           YR I +    +LN+ G+   EIGY+QK  ++ + E+ K F    +KD  G DR+
Sbjct: 221 YRNIIEKSRPYLNEKGIMFFEIGYDQKEKIITLGENNK-FETVVYKDINGRDRI 273


>gi|315222985|ref|ZP_07864864.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus
           F0211]
 gi|315187935|gb|EFU21671.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus
           F0211]
          Length = 276

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVT-GLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +S SF  R++  LS  Q +  +  ++  DD +   L     + L H     I+G  +F+ 
Sbjct: 22  ESLSFTFRISKNLSFTQFVLKMQAEATADDIE--LLKKIQSQLLVHRPAQYIIGNAEFHG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETE LV+  L+ + P       +++LD+GTG+GA+ L+L  E   +
Sbjct: 80  HSFKVDERVLIPRPETEELVNLILSEN-PNTN----IKVLDIGTGSGAIALSLATERSNW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS  AL++A+ NA    V+   D +QSD F ++ G +D+IVSNPPYI     + 
Sbjct: 135 QVTASDISQDALDLAQENAEAIDVA--IDFVQSDCFQAITGKYDIIVSNPPYISETDREE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +GL V   +P ++L    DG + YR IA+   +HL + G   +EIGY Q   V  +F+S 
Sbjct: 193 VGLNVLASEPHLALFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKELFQSA 252

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                +   +D  G DR+++
Sbjct: 253 FPKMRIRVLQDQFGKDRMVV 272


>gi|261209905|ref|ZP_05924206.1| Polypeptide chain release factor methylase [Vibrio sp. RC341]
 gi|260841091|gb|EEX67616.1| Polypeptide chain release factor methylase [Vibrio sp. RC341]
          Length = 286

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L++     L   + R +  E I  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEEPALASLDALLARRMAGEPIAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  +V   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALVDGELLDLGTGTGAIALALASELPQRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A  +A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAALAQENATRLAI-HNTQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q   V  +   
Sbjct: 199 LSQGDVR-FEPQSALVAKENGLADIRYISTHAPHFLLDGGWLLFEHGYDQGAAVQMMLRE 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V   +DY GNDRV L
Sbjct: 258 LGYQNVTTEQDYAGNDRVTL 277


>gi|169795524|ref|YP_001713317.1| methyl transferase [Acinetobacter baumannii AYE]
 gi|213158535|ref|YP_002319833.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
 gi|215483011|ref|YP_002325216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB307-0294]
 gi|301344981|ref|ZP_07225722.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB056]
 gi|301513509|ref|ZP_07238746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB058]
 gi|301597422|ref|ZP_07242430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB059]
 gi|332850712|ref|ZP_08432959.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332866987|ref|ZP_08437304.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013113]
 gi|169148451|emb|CAM86317.1| methyl transferase [Acinetobacter baumannii AYE]
 gi|213057695|gb|ACJ42597.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
 gi|213988463|gb|ACJ58762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB307-0294]
 gi|332730549|gb|EGJ61865.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332734316|gb|EGJ65444.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013113]
          Length = 271

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 115/217 (52%), Gaps = 12/217 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            GY+Q   V  IF       + + +DYG NDRV L C
Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIKSIQDYGRNDRVTLAC 269


>gi|32475816|ref|NP_868810.1| hemK protein [Rhodopirellula baltica SH 1]
 gi|32446359|emb|CAD76187.1| hemK protein [Rhodopirellula baltica SH 1]
          Length = 296

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 5/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G    ++    D V ++ QR      + R  +   + +++G+R+FY++ +
Sbjct: 34  DAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYSISI 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +  +   PRPETE LV  A+     R+  R    +LD+GTG+GA+ +A+ K  P  +  
Sbjct: 94  RVDENVLVPRPETEHLVIEAIDQIKGRLSDRPSPTVLDIGTGSGAIAVAIAKSLPKTQVT 153

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183
            VDIS  AL+IAK N     +S+R   LQSD F  +E    FDVI SNPPYI     D L
Sbjct: 154 AVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEYDEL 213

Query: 184 GLEVRDFDPRISLDGGIDGLSHY-RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              VR+F+PR +L  G DG     R + D V R LN  G   +E+          + E  
Sbjct: 214 PTTVREFEPRGALLSGPDGTEIIARLLNDSVQR-LNDGGQLIIELSPMIAGVSKTLAEQN 272

Query: 243 KLFL-VNAFKDYGGNDRVL 260
             +  ++  KD  G++R+L
Sbjct: 273 GGYKEIHLIKDLAGHERIL 291


>gi|306829485|ref|ZP_07462675.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC
           6249]
 gi|304428571|gb|EFM31661.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC
           6249]
          Length = 278

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 16/219 (7%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    I+G  DF+ ++L +      PRPETE LVD  L  +       + ++ILD+GTG
Sbjct: 65  HKPAQYIIGQADFFGMQLKVDERVLIPRPETEELVDLILTEN-----PEESLKILDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ LAL K  P +     DIS  ALE+A  NA    ++  F   +SD F+ +   +D+
Sbjct: 120 SGAIALALAKNRPDWSVTAADISQVALELASENASNQNLNIFFK--KSDCFAEISEKYDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       +GL V   +P ++L    DGL+ YR IA+    +L   G   +EI
Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEI 237

Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
           GY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 238 GYKQGQSVPALFRKHLPEKR----VRTLKDQFGQDRMVV 272


>gi|227890653|ref|ZP_04008458.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
 gi|227867591|gb|EEJ75012.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
 gi|300214392|gb|ADJ78808.1| Peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius CECT 5713]
          Length = 279

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D    +C   G +  Q++++  + +DD+    L   I    +   +  ++G++DFY 
Sbjct: 23  TLEDVDYLICGQMGWNKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      +
Sbjct: 83  LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       
Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +   V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF +S
Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGKAVKKIFKDS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +   KD  GNDR++
Sbjct: 257 FPNSEITLKKDINGNDRMI 275


>gi|153213281|ref|ZP_01948693.1| hemK protein [Vibrio cholerae 1587]
 gi|124116081|gb|EAY34901.1| hemK protein [Vibrio cholerae 1587]
          Length = 286

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLDLLLARRRAGEPMAYILGEREFWSLSL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPMRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|254509163|ref|ZP_05121262.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus 16]
 gi|219547914|gb|EED24940.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus 16]
          Length = 286

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +LD  Q     + + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSFLLTWPDKLLDAEQLAQFASLLERRLGGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P  +  
Sbjct: 89  DVAPSTLIPRPDTERLVEIALDKA-----SDSEGDILDLGTGTGAIALALASELPNRRVW 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
           GVD+   A ++A SNA    +    +     WF  +E    F +IVSNPPYIE       
Sbjct: 144 GVDLKEDARQLASSNAKKLNIP-NCEFRSGSWFDPIESGTQFALIVSNPPYIEKSDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  + I++    HL   G    E GY+Q + V  +  S  
Sbjct: 203 QGDVR-FEPLSALVAEDNGLADIKYISEVARSHLQPGGWLMFEHGYDQGIAVRDLLASLG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V  FKDYG NDRV +
Sbjct: 262 YDQVETFKDYGNNDRVTI 279


>gi|163847181|ref|YP_001635225.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus aurantiacus J-10-fl]
 gi|222525022|ref|YP_002569493.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus sp. Y-400-fl]
 gi|163668470|gb|ABY34836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus aurantiacus J-10-fl]
 gi|222448901|gb|ACM53167.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus sp. Y-400-fl]
          Length = 283

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 6/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S  +V+ + D VL   Q       I R    E +  ++G R+F+ + L
Sbjct: 24  DAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFGLDL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETELLV+  L  +  R     ++ I D+GTG+GA+ +AL    P     
Sbjct: 84  FVDRRVLIPRPETELLVELTLKEA-QRFNHTPLI-IADIGTGSGAIAIALAMHLPHALIY 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS  AL +A  N     + +R   L+ D  + +    D++VSNPPY    I+  +  
Sbjct: 142 GVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAPVDILVSNPPY---TILTEIDE 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244
            V   +P ++LDGG DGL  YR +      +L  +G   +EIG  Q   VV +  ++  +
Sbjct: 199 GVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEIGSTQAASVVHLLRQALPM 258

Query: 245 FLVNAFKDYGGNDRVL 260
                 +D  G+DR++
Sbjct: 259 AETGIERDLAGHDRIV 274


>gi|157376590|ref|YP_001475190.1| HemK family modification methylase [Shewanella sediminis HAW-EB3]
 gi|157318964|gb|ABV38062.1| modification methylase, HemK family [Shewanella sediminis HAW-EB3]
          Length = 280

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD  L   Q       + R L    I  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 46  PDERLTSDQVTAFGEMVARRLLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L      D  R+LDLGTGTGA+ L+L  E P ++   VD   +A+ +AK+N     
Sbjct: 106 LNLPL-----ADSARVLDLGTGTGAIALSLAYEKPEWQITAVDKIIEAVALAKANRAHLK 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  + +QSDWF SV    F++IVSNPPYI+         +VR F+P+ +L  G +G +
Sbjct: 161 LPQ-VEIVQSDWFDSVACYDFNLIVSNPPYIDETDEHLSQGDVR-FEPQSALTAGEEGFA 218

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA     +L   G   +E GY Q + + +         V   +D+G NDR  L
Sbjct: 219 DLYHIASCARDYLAPGGYLLLEHGYQQAIQLRKKMIELGYENVATVRDFGSNDRCTL 275


>gi|157962942|ref|YP_001502976.1| HemK family modification methylase [Shewanella pealeana ATCC
           700345]
 gi|157847942|gb|ABV88441.1| modification methylase, HemK family [Shewanella pealeana ATCC
           700345]
          Length = 280

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       +   PD  L+  Q F     + + L+   I  I+G R+F+++  
Sbjct: 26  DAEVMLLHVINKQRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWSLPF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE+LV++AL  +LP  E     ++LDLGTGTGA+ L+L  E   ++  
Sbjct: 86  RVNPTTLIPRPDTEILVETAL--NLPLAES---AKVLDLGTGTGAIALSLAHERSEWQVC 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            +D    A+ +AK N  TN   E+ D  QSDWF +VE   F++IVSNPPYI+        
Sbjct: 141 AIDKVDDAVALAKENR-TNLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEHLSQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L     G +    IA+    +L   G   +E GY Q +++         
Sbjct: 200 GDVR-FEPASALTAPQRGFADLFYIAESARDYLAPGGYLLLEHGYQQAIELREKLIELGY 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +D+G NDR  L
Sbjct: 259 ENVATVRDFGSNDRCTL 275


>gi|313667605|ref|YP_004047889.1| Hemk protein [Neisseria lactamica ST-640]
 gi|313005067|emb|CBN86499.1| putative Hemk protein [Neisseria lactamica 020-06]
          Length = 273

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 123/240 (51%), Gaps = 19/240 (7%)

Query: 26  PDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           PD V   RQR    + + +S L  E +  +LGWR+FY  R  ++ +   PRPETE LV++
Sbjct: 41  PDEV---RQR---ADRLAQSRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEA 94

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            LA  LP     +  R+ DLGTG+GAV + +  E P       DIS  ALE A+ NA   
Sbjct: 95  VLA-RLP-----ENGRVWDLGTGSGAVAVTVALERPDAFVCASDISPPALETARKNAADL 148

Query: 145 GVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           G +  F      WF +    EG +D+IVSNPPYIE+        ++R F+P+I+L    D
Sbjct: 149 GAAVEF--AHGSWFDTDMPSEGKWDIIVSNPPYIENGDEHLSQGDLR-FEPQIALTDFSD 205

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GLS  RT+A G    L + G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 206 GLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|239628685|ref|ZP_04671716.1| modification methylase [Clostridiales bacterium 1_7_47_FAA]
 gi|239518831|gb|EEQ58697.1| modification methylase [Clostridiales bacterium 1_7_47FAA]
          Length = 328

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 131/264 (49%), Gaps = 14/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF-----LTNAIVRSLKHESIHRILGWRDF 60
           D+   L    G S    +   D  L + +  F         I R  +   +  + G ++F
Sbjct: 58  DARYLLLEAFGQSLASFLAVKDKALPEDEETFSKCRKYEEMIDRRAERIPLQHLTGVQEF 117

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 ++     PR +TE LV+  L     + +K     +LD+ TG+G + ++L     
Sbjct: 118 MGFEFYVNEHVLIPRQDTETLVELVL-----KEQKGKDAALLDVCTGSGCIAISLALMGG 172

Query: 121 FFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
           +     +D+S +AL +A  NA  +       F+ ++SD F  +E    +D+IVSNPPYI 
Sbjct: 173 YRDVTALDVSREALAVAARNAQRLLKEHEGEFNLIESDMFERLEPDRRYDIIVSNPPYIP 232

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  ++ L  EVRD++PR++LDG  DGL+ YR +A+G  +HL   G   +EIG++Q   V 
Sbjct: 233 SHDIEGLEPEVRDYEPRMALDGTADGLAFYRILAEGCRKHLCPGGCVYMEIGFDQGQAVS 292

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           R+FE +    V   KD  G DRV+
Sbjct: 293 RMFEMQGYVQVEVMKDMAGLDRVV 316


>gi|330994787|ref|ZP_08318709.1| methyltransferase [Gluconacetobacter sp. SXCC-1]
 gi|329758048|gb|EGG74570.1| methyltransferase [Gluconacetobacter sp. SXCC-1]
          Length = 287

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D       + + R L HE +  I G   F+++ L +S  T  PR ++E LV++ L   
Sbjct: 56  LTDAAHATFIHMLGRRLNHEPMAYITGQAGFWSLDLAVSPATLIPRADSETLVEAVL-HH 114

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP  ++   +R+LD+GTGTG + LA+L E     G+G DI+  A  +A  NA  N ++ R
Sbjct: 115 LP--DRTRALRVLDIGTGTGCLLLAVLAEYGQATGIGTDINPHAARLAAHNAARNALASR 172

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             TL  +W  +V G FD+++SNPPYI    +  L  +V   +P  +LDGG DGL  YR +
Sbjct: 173 CVTLCCNWADAVRGPFDLVLSNPPYIPHADLAGLMPDVVAHEPARALDGGPDGLVAYRAL 232

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           A  +   L   G   +E+G  Q   V  +   R L +     D GG  R L+
Sbjct: 233 AAIMPALLAPGGTAVLELGIGQDRSVPALMRERGLEVAEIRPDLGGIGRALV 284


>gi|312958851|ref|ZP_07773370.1| modification methylase [Pseudomonas fluorescens WH6]
 gi|311286621|gb|EFQ65183.1| modification methylase [Pseudomonas fluorescens WH6]
          Length = 276

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 124/240 (51%), Gaps = 8/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRP+TELLVD+A
Sbjct: 42  PEKIVSSEDALTFAGYLQRRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVDAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP        R+LDLGTG+GA+ LAL  E P +    VD   +A+ +A+ N     
Sbjct: 102 LEL-LPATP----TRVLDLGTGSGAIALALASERPAWHVTAVDRVLEAVALAERNRQRLH 156

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +      L S WFS+++G  +D+I+SNPPYI       +  +VR F+P  +L  G DGL 
Sbjct: 157 LHNAM-VLNSHWFSALQGHRYDLIISNPPYIAENDPHLVAGDVR-FEPASALVAGRDGLD 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I +    HLN  G   +E GY+Q   V  +  ++    V++  D GG++R+ L  R
Sbjct: 215 DLRLIINEAPAHLNAGGWLLLEHGYDQAEAVRDLLLTQGFEDVHSRIDLGGHERITLGRR 274


>gi|326559213|gb|EGE09644.1| protein methyltransferase HemK [Moraxella catarrhalis 46P47B1]
 gi|326576387|gb|EGE26296.1| protein methyltransferase HemK [Moraxella catarrhalis O35E]
          Length = 295

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 10/229 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-----LPR 92
           +T  I++    + +  + G + F+     +++ T  PR +TE+LV+  L ++     + +
Sbjct: 65  ITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNAHTLIPRADTEILVEIILNYAKAQQKIRQ 124

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            + +++V ILDLGTGTG + + L  E  F + V VDIS +AL++A+ N   + ++ R   
Sbjct: 125 TDNKNLVNILDLGTGTGCIGITLALELEFAQVVLVDISSEALKVAEQN--NHRLNARCQL 182

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           LQS W   V G FD+IVSNPPYI+      + L+    +P  +L    DGL+  R I + 
Sbjct: 183 LQSHWLQKVSGQFDIIVSNPPYIKENDEHLVNLK---HEPITALVAAEDGLTDIRHIIET 239

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              +L   GL ++E G++Q   V  ++ S     V   +DYGGNDRV L
Sbjct: 240 GRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGYLDVYTIQDYGGNDRVTL 288


>gi|325129314|gb|EGC52151.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis OX99.30304]
 gi|325135296|gb|EGC57917.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M0579]
 gi|325201297|gb|ADY96751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240149]
 gi|325208917|gb|ADZ04369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis NZ-05/33]
          Length = 273

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|168233806|ref|ZP_02658864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194470184|ref|ZP_03076168.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194456548|gb|EDX45387.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205332122|gb|EDZ18886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 277

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----LKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|323261019|gb|EGA44614.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 292

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|206558778|ref|YP_002229538.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315]
 gi|198034815|emb|CAR50683.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315]
          Length = 280

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LD    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     ++R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVAQRNADKLLDAQRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           I  S     V +  D    +R 
Sbjct: 252 ILVSHGFVAVESLTDLAAIERT 273


>gi|255658856|ref|ZP_05404265.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM
           20544]
 gi|260849259|gb|EEX69266.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM
           20544]
          Length = 291

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 118/220 (53%), Gaps = 9/220 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            + +ILG ++F  +   +++DT  PRP+TE+LV +A+   L  +   + +R  D+GTG+G
Sbjct: 74  PVAQILGEKEFMGLTFKVTADTLVPRPDTEILVQAAVD-RLRAMAGEEPLRFADIGTGSG 132

Query: 110 AVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165
           A+CL++L    +  G     VDIS  A  +A+ NA + G+++R      D    + G+ F
Sbjct: 133 AICLSVLH---YLSGTVADTVDISPAARAVAEENAASLGLADRITFHTGDLLQPLSGISF 189

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             I+SNPPYI    +  L  EVR  +P  +L GG DGL  YR +A+     L   G  + 
Sbjct: 190 AAILSNPPYIPEADIAKLAPEVRLKEPHTALSGGQDGLDFYRRLANEAPAMLVPGGFTAF 249

Query: 226 EIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           E+G +Q  DV  + ++  L        DY G DRV++  R
Sbjct: 250 EVGIHQAGDVADLLKANPLIDRTEILPDYAGIDRVVVGWR 289


>gi|310779237|ref|YP_003967570.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ilyobacter polytropus DSM 2926]
 gi|309748560|gb|ADO83222.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ilyobacter polytropus DSM 2926]
          Length = 376

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 120/234 (51%), Gaps = 10/234 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++ ++      I R+   + +  ILG  +F+  +  +      PRPETELLV+  +    
Sbjct: 146 EEEKKLIKEMIIKRARDKKPLQYILGEEEFFGYKFKVDERVLIPRPETELLVEQCIVLM- 204

Query: 91  PRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                 DV    ILD+G G+GA+ + L K+ P  K +GVDIS  ALE+A  N   N V  
Sbjct: 205 -----SDVKTPFILDIGVGSGAISVTLGKKIPTSKVLGVDISDGALEVANQNKELNNVK- 258

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F +V    FD+IVSNPPYI       L  EV+ ++P+++L    +GL  Y+
Sbjct: 259 NVKFIKSDVFENVSYKEFDMIVSNPPYIPEKEYKILMHEVKKYEPKLALTAEDEGLYFYK 318

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I    S +L   G+ + E+GYNQ   V  + E  +   +   KDY   +R+++
Sbjct: 319 LITKKASDYLKNGGVLAFEVGYNQAQKVKNMMEDNEFENIVIVKDYHQIERIVI 372


>gi|225870518|ref|YP_002746465.1| methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|225699922|emb|CAW93853.1| putative methyltransferase [Streptococcus equi subsp. equi 4047]
          Length = 282

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 19/248 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L  +Q +   D  L   +R FL  +     +H S   I G   F ++ L + S    PRP
Sbjct: 41  LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           ETE LV+  L       ++ D  R  +LD+GTG+GA+ +AL K  P ++    DIS  AL
Sbjct: 94  ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            +A SNA+ + V   F+  QSD FS + G FD+IVSNPPYI     D +GL V   +P +
Sbjct: 147 SLAYSNALDHHVEIAFE--QSDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    +G S YR I +  S +L   G    EIGY Q   + R+   R     +   KD 
Sbjct: 205 ALFAAENGFSIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 265 LGKERMVV 272


>gi|205352557|ref|YP_002226358.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205272338|emb|CAR37218.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326627617|gb|EGE33960.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 277

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPSGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|170723616|ref|YP_001751304.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida W619]
 gi|169761619|gb|ACA74935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas putida W619]
          Length = 276

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PERIVSSEDAQTYAGYLHRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++     ++LDLGTGTGA+ LAL  E P ++   +D   +A+ +A+ N    G
Sbjct: 102 L-----ELQPATPAKVLDLGTGTGAIALALASECPAWQVTALDRVEEAVALAERNRQRLG 156

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +      L S WFS+++G  FD+I+SNPPYI +        +VR F+P  +L  G DGL 
Sbjct: 157 LGN-VKVLASHWFSALDGERFDLILSNPPYIAAEDPHLAAGDVR-FEPSSALVAGADGLD 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R I      HL   G   +E GY+Q   V  +   +    V + KD GG++R+ L
Sbjct: 215 DLRLIVGQAPAHLLPGGWLLLEHGYDQAPAVRALLTGQGFIEVASRKDLGGHERISL 271


>gi|153825564|ref|ZP_01978231.1| hemK protein [Vibrio cholerae MZO-2]
 gi|149740715|gb|EDM54814.1| hemK protein [Vibrio cholerae MZO-2]
          Length = 286

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEEN-DP 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L L    F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 198 HLSLGDLRFEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|167553920|ref|ZP_02347663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|168462749|ref|ZP_02696680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633874|gb|EDX52226.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|205321752|gb|EDZ09591.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 277

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|15672580|ref|NP_266754.1| protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491064|ref|YP_003353044.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactococcus lactis subsp. lactis KF147]
 gi|12723493|gb|AAK04696.1|AE006293_2 protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281374822|gb|ADA64342.1| Protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactococcus lactis subsp. lactis KF147]
 gi|326406099|gb|ADZ63170.1| methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. lactis CV56]
          Length = 270

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 8/230 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D++   LT    R  ++E    I+GW +F +++L +      PRPETE LV+  LA +  
Sbjct: 45  DQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILAEN-- 102

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
              ++D ++ILD+GTG+GA+ ++L +    +     DIS +AL +A  NA  N  +  F 
Sbjct: 103 ---EKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEINQANLEF- 158

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+ IAD
Sbjct: 159 -IQSDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQKIAD 217

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
               HL  +G   +EIGY Q   V  IF+ +    LV+  +D  G DR++
Sbjct: 218 QAVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMI 267


>gi|15602421|ref|NP_245493.1| hypothetical protein PM0556 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18202825|sp|Q9CN82|HEMK_PASMU RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.PmuHemKP
 gi|12720822|gb|AAK02640.1| HemK [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 298

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 16/267 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VT  S   ++   ++VL + +   L   ++R  K E I  ILG + F+++ L +S 
Sbjct: 33  LLQTVTKRSKASILAFSETVLTEVELQQLAQLLMRRAKGEPIAYILGEKAFWSLSLKVSE 92

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTG-AVCLALLKESPFFKGV 125
            T  PRP+TE+LV+ AL F+  R+    V   + ILDLGTGTG        + +P  +  
Sbjct: 93  HTLIPRPDTEVLVEHALDFAKQRVTSAHVSGELSILDLGTGTGAIALALAAELTPLTQKC 152

Query: 126 GVDIS-------CKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE 176
           G++++        +A+ +AK NA  N +   F  LQS WF ++  E  FD+IVSNPPYI+
Sbjct: 153 GINLNILGVDRIAEAVALAKDNAKQNELKVNF--LQSVWFDALNPEIRFDLIVSNPPYID 210

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+P  +L    +G +  R I +     L   G   +E G+ Q   V 
Sbjct: 211 KNDPHLTQGDVR-FEPLSALVAAEEGYADIRHIIEQAPLFLKPQGALLLEHGWQQAEKVR 269

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
            IF+      V   KDY GN+RV L C
Sbjct: 270 SIFQKNLWHNVATLKDYSGNERVTLGC 296


>gi|16765116|ref|NP_460731.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|62180339|ref|YP_216756.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161613729|ref|YP_001587694.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|167993218|ref|ZP_02574313.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168237829|ref|ZP_02662887.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168820513|ref|ZP_02832513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194443667|ref|YP_002041025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194735200|ref|YP_002114805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197265643|ref|ZP_03165717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198245434|ref|YP_002215370.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|207856718|ref|YP_002243369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224583735|ref|YP_002637533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|17865746|sp|P40816|HEMK_SALTY RecName: Full=Protein methyltransferase hemK; AltName:
           Full=M.StyLTHemKP; AltName:
           Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
           Full=Protein-glutamine N-methyltransferase hemK
 gi|16420305|gb|AAL20690.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62127972|gb|AAX65675.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363093|gb|ABX66861.1| hypothetical protein SPAB_01454 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402330|gb|ACF62552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194710702|gb|ACF89923.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197243898|gb|EDY26518.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197289229|gb|EDY28596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197939950|gb|ACH77283.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205328672|gb|EDZ15436.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205342641|gb|EDZ29405.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|206708521|emb|CAR32842.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224468262|gb|ACN46092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261246961|emb|CBG24778.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993723|gb|ACY88608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158299|emb|CBW17798.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312912764|dbj|BAJ36738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320085724|emb|CBY95502.1| possible protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224403|gb|EFX49466.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322616771|gb|EFY13679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322620419|gb|EFY17285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322625679|gb|EFY22498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322626129|gb|EFY22939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322633736|gb|EFY30476.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322638890|gb|EFY35583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322640873|gb|EFY37522.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322644094|gb|EFY40639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322649165|gb|EFY45603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322655324|gb|EFY51632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322660918|gb|EFY57149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322662785|gb|EFY58992.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322667969|gb|EFY64128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322674269|gb|EFY70363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322678550|gb|EFY74608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322683209|gb|EFY79225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322686903|gb|EFY82881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322714813|gb|EFZ06384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323130045|gb|ADX17475.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|323195207|gb|EFZ80387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323200202|gb|EFZ85288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323204530|gb|EFZ89534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207353|gb|EFZ92301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323213948|gb|EFZ98717.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323217338|gb|EGA02057.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323228021|gb|EGA12166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231360|gb|EGA15473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323235800|gb|EGA19879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323240369|gb|EGA24412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323245261|gb|EGA29261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323249066|gb|EGA32986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323252823|gb|EGA36659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254892|gb|EGA38686.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323266734|gb|EGA50220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323268941|gb|EGA52397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326623116|gb|EGE29461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|332988662|gb|AEF07645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|256545371|ref|ZP_05472734.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398932|gb|EEU12546.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus vaginalis ATCC 51170]
          Length = 263

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 8/209 (3%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G  +FY + L +      PR ETE+LVD  +       +  +  +ILD+GTG+GA+ LA
Sbjct: 62  IGKWNFYGLDLLVDKRALIPRYETEILVDLIIN------DNSNNKKILDIGTGSGAISLA 115

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L K     K +GVDIS  A+++A  N +   ++   +  +SD FS++E  FD+IVSNPPY
Sbjct: 116 LSKNLKDSKIIGVDISKNAIDLANENKIKLNIN-NVEFKESDIFSNIEEKFDIIVSNPPY 174

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I     + L  ++  ++P+ +L GG DGL  Y+ I       LNK+G   +EIGY+QK  
Sbjct: 175 INKEDFEKLDNKLY-YEPQNALYGGEDGLYFYKKIIKNAKNFLNKNGKIYLEIGYDQKDY 233

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +  + E      + ++KD+   DR++  C
Sbjct: 234 ISNLLEEYGYKQIKSYKDFNDFDRIIKAC 262


>gi|325131308|gb|EGC54019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M6190]
 gi|325137337|gb|EGC59925.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis ES14902]
          Length = 273

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  +LGWR+FY  R  ++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  +LE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|330961729|gb|EGH61989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAAVAFAGYLERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIGLALANERKQWKVTAVDRVAEAVALAERNRQRLH 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S WFS ++G  FD+I+SNPPY+          +VR F+P  +L  G DGL 
Sbjct: 158 LNNA-EIFESHWFSGLQGRQFDLIISNPPYVPDDDPHLSAGDVR-FEPSSALIAGADGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I +    HLN +G   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRAITEQAPAHLNAEGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|254804125|ref|YP_003082346.1| heme biosynthesis protein [Neisseria meningitidis alpha14]
 gi|254667667|emb|CBA03497.1| heme biosynthesis protein [Neisseria meningitidis alpha14]
          Length = 273

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|163815256|ref|ZP_02206633.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759]
 gi|158449451|gb|EDP26446.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759]
          Length = 284

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 115/220 (52%), Gaps = 4/220 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I G ++F       S +   PR +TE+LV++AL  +    +  DV   
Sbjct: 61  IRRRCTREPLQYITGVQNFMGYDFCTSENVLIPRQDTEILVETALNLTKSSQKTLDV--- 117

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSS 160
           LD+  GTG + ++     P  K    DIS  A+ + + N        ERFD + +D F  
Sbjct: 118 LDMCCGTGCIGISYGLLRPDSKVTLADISGDAIRVTRKNVTKLCDEPERFDVINTDLFGD 177

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G FD+I+SNPPYI+S +++ L  EVRD +PR++LDG  DGL  YR I     +++  +
Sbjct: 178 VDGQFDLILSNPPYIKSDVIEALMPEVRDNEPRLALDGKADGLYFYRIIVSQAIKYIKDE 237

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G    EIG +Q  DV  +F       V+  +D   NDRV+
Sbjct: 238 GYVVFEIGNDQAEDVQHLFVDTGYDDVHVVQDLCRNDRVV 277


>gi|118498112|ref|YP_899162.1| HemK family modification methylase [Francisella tularensis subsp.
           novicida U112]
 gi|194323338|ref|ZP_03057122.1| methyltransferase, HemK family [Francisella tularensis subsp.
           novicida FTE]
 gi|118424018|gb|ABK90408.1| modification methylase, HemK family [Francisella novicida U112]
 gi|194322702|gb|EDX20182.1| methyltransferase, HemK family [Francisella tularensis subsp.
           novicida FTE]
          Length = 284

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 YNFTDIKTVKDLNNNDR 275


>gi|160916054|ref|ZP_02078261.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991]
 gi|158431778|gb|EDP10067.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991]
          Length = 284

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 12/258 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  +T   +H + ++ D  +   Q       + R ++ E +  +LG+  FY  R  ++ 
Sbjct: 28  YLLELTNKEAHNLYMEYDEEMPQAQIDEFEAGVERLVEGEPLGHVLGFEWFYGYRFKVNE 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETE LV   LA      +    V  +D+GTG+GA+ +AL KE P    +  DI
Sbjct: 88  DVLIPRPETEELVAYILAAYDEYFKDTLNVTAVDVGTGSGAIAVALKKEEPNIHILASDI 147

Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S KA  IAK NA  N V       D L+     +++   D+++SNPPYI S   + +   
Sbjct: 148 SEKACRIAKQNAQDNDVVVEVLCGDMLEPLIERNIK--VDILISNPPYIPS--DEAMEDS 203

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF- 245
           V +++P ++L GG DGL  YR I +   + L    + + E+GYNQK  +    E+RK F 
Sbjct: 204 VVNYEPHVALFGGEDGLKFYRIIFEHAKKVLKDKAMMAFEMGYNQKEALSA--EARKYFP 261

Query: 246 --LVNAFKDYGGNDRVLL 261
              +   KD  G +R+L 
Sbjct: 262 DAKIEVIKDMSGKNRMLF 279


>gi|153828622|ref|ZP_01981289.1| hemK protein [Vibrio cholerae 623-39]
 gi|148875893|gb|EDL74028.1| hemK protein [Vibrio cholerae 623-39]
          Length = 286

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|71735390|ref|YP_273269.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71555943|gb|AAZ35154.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WF+++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNSHWFNALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|322387785|ref|ZP_08061394.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis
           ATCC 700779]
 gi|321141652|gb|EFX37148.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis
           ATCC 700779]
          Length = 278

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +        + ++ F+     +   H     I+G  +F+ ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFTLQQEATEEEKQFVEEIYKKLAAHIPAQYIIGHAEFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PR ETE LV+  LA +L     +D +++LD+GTG+GA+ LAL K  P +  
Sbjct: 82  LKVDERVLIPRLETEELVELILAENL-----KDNLKVLDIGTGSGAIALALAKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS +AL+++  NA    ++  F  ++SD FS +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQEALDLSLENANAQNLNLSF--IKSDCFSEISAKYDIIVSNPPYISRADEVEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
           L V   +P ++L    DGL+ YR IA+    +LN  G   +EIGY Q   V  +F E+  
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDSKDYLNDGGKIYLEIGYKQGQSVPALFMENFP 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KD  G DR+++
Sbjct: 255 EKRVRTLKDQFGQDRMVV 272


>gi|325133243|gb|EGC55909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M13399]
 gi|325139388|gb|EGC61928.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis CU385]
 gi|325201113|gb|ADY96568.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis H44/76]
          Length = 273

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|171319080|ref|ZP_02908204.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MEX-5]
 gi|171095719|gb|EDT40675.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MEX-5]
          Length = 280

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 132/262 (50%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ L+    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHAFGWTRTQLITRGDAPLEPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGALHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  SR    V +  D    +R 
Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273


>gi|308050534|ref|YP_003914100.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
           balearica DSM 9799]
 gi|307632724|gb|ADN77026.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
           balearica DSM 9799]
          Length = 279

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 116/225 (51%), Gaps = 9/225 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R    E +  + G R+F+++ L +++ T  PRP+TE LV++AL   LP     D
Sbjct: 56  LAGLLARRQAGEPVAHLTGQREFWSLPLKVNATTLIPRPDTESLVEAALELGLP-----D 110

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DLGTGTGA+ LAL  E P ++   VD    A+ +A++N  +  +          W
Sbjct: 111 DAEVVDLGTGTGAIALALKSEQPGWRISAVDRIADAVALARAN--SEALDLPITVHHGSW 168

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  + G  FD+IVSNPPYI+         +VR F+PR +L     GL+  R +A+  + H
Sbjct: 169 FEPLSGQRFDLIVSNPPYIDPQDPHLGQGDVR-FEPRSALTADDHGLADIRHLAEAAANH 227

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L   G+  VE G++Q   V  IF    L  V   +D G  +R  L
Sbjct: 228 LRAGGVLMVEHGWDQGEAVREIFRQAGLTSVRTGRDLGNRERFTL 272


>gi|114046305|ref|YP_736855.1| HemK family modification methylase [Shewanella sp. MR-7]
 gi|113887747|gb|ABI41798.1| modification methylase, HemK family [Shewanella sp. MR-7]
          Length = 286

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 128/254 (50%), Gaps = 8/254 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+  FL      S   +   P+  L   Q       + R  +   +  I+G R+F+++  
Sbjct: 28  DAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE+LV++AL   L         ++LDLGTGTGA+ LAL  E   ++  
Sbjct: 88  IVNDTTLIPRPDTEILVETALNLPL-----ESNAKVLDLGTGTGAIALALASERATWQIT 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +AK+N  TN   E+ + LQSDWFS+++   FD+IVSNPPYI+        
Sbjct: 143 AVDKVEEAVALAKANR-TNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +         
Sbjct: 202 GDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGY 260

Query: 245 FLVNAFKDYGGNDR 258
             V   +D+G NDR
Sbjct: 261 QNVATVRDFGSNDR 274


>gi|261821676|ref|YP_003259782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261605689|gb|ACX88175.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pectobacterium wasabiae WPP163]
          Length = 281

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   V+   ++ L   ++  LT  + R    E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGFVTGKSRTFVLAFGETELRAAEQQQLTELLARRELGEPIAYLIGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP    +    +LDLGTGTGA+ LA+  E      
Sbjct: 82  LVVSPATLIPRPDTECLVEQAL-LRLP----KKPCDVLDLGTGTGAIALAIASERHDCLV 136

Query: 125 VGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
           VGVD+  +A+ +A  NA    + + RF  L   W+S +E   F +I SNPPYI++  V  
Sbjct: 137 VGVDLQPEAVALATKNAQQLRLDNARF--LPGSWYSPLEHRRFALIASNPPYIDADDVHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  R I +    +L   G   +E G+ Q   V ++ ++R
Sbjct: 195 SQGDVR-FEPASALVAADNGLADLRIIIESAPHYLEVGGWLLLEHGWQQGDAVRQLLQAR 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   +DYGGNDRV L
Sbjct: 254 GFTQLETCQDYGGNDRVSL 272


>gi|261253597|ref|ZP_05946170.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP
           102891]
 gi|260936988|gb|EEX92977.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP
           102891]
          Length = 286

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +LD +Q     + + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSFLLTWPDKILDAQQLAAFDDLLQRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  ++    + D   ILDLGTGTGA+ LAL  E P  +  
Sbjct: 89  KVSPTTLIPRPDTERLVEIALDKAM----QMD-GDILDLGTGTGAIALALASELPQRQVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
           G+D+   A ++A+SNA    +S     L   WF  +     F +IVSNPPYIE       
Sbjct: 144 GIDLKQDAQQLAQSNASALNLSNT-QFLAGSWFEPLAAGTEFALIVSNPPYIEKEDPHLT 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+  + IA     +L   G    E G+ Q   V  +  S  
Sbjct: 203 QGDVR-FEPLSALVADEKGLADIKHIATQARDYLMDSGWLMFEHGFEQGEPVRELLRSLG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V  +KDYG NDRV +
Sbjct: 262 YDQVATYKDYGDNDRVTI 279


>gi|300939552|ref|ZP_07154209.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
 gi|300455556|gb|EFK19049.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDCMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|237799728|ref|ZP_04588189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022583|gb|EGI02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRKRLH 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  + L S+WFS+++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAEVLDSNWFSALQGRQFDLIISNPPYIADADPHLAAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      HLN +G   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLREIIRQAPTHLNAEGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|317048555|ref|YP_004116203.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Pantoea sp. At-9b]
 gi|316950172|gb|ADU69647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. At-9b]
          Length = 276

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 131/262 (50%), Gaps = 16/262 (6%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   D++LDD Q   L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLAFVTGKSRSWLVAFDDALLDDVQLQQLATLLARRAQGEPIAHLVGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE+LV+ ALA  LP         ILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LRVSDATLIPRPDTEVLVEQALAH-LPAT----AATILDLGTGTGAIALALASERPDCQV 136

Query: 125 VGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            G D    A+ +A+ NA    +TN          S WF+++    FD+I SNPPYI++  
Sbjct: 137 TGCDRVEAAVALAQDNAQRLHITN-----VQFFLSHWFAALPSQRFDLIASNPPYIDAAD 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P  +L     GL+  R I       L   G   +E G+ Q   V  + 
Sbjct: 192 HHLQQGDVR-FEPLSALVAEEAGLADLREIITTAPAWLLPGGWLLLEHGWQQGEAVRTLM 250

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
             +    VN   DYGGN RV L
Sbjct: 251 TQQGYQQVNTVDDYGGNPRVTL 272


>gi|189485188|ref|YP_001956129.1| methylase of polypeptide chain release factors [uncultured Termite
           group 1 bacterium phylotype Rs-D17]
 gi|170287147|dbj|BAG13668.1| methylase of polypeptide chain release factors [uncultured Termite
           group 1 bacterium phylotype Rs-D17]
          Length = 288

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 125/232 (53%), Gaps = 7/232 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D Q       I+R  K E +  I+G   F +    ++ +   PRPETE+LV++AL  +
Sbjct: 53  LTDIQVLQYERYILRRSKREPVAYIMGLAGFMDFEFKVNKNVLIPRPETEILVETALKIA 112

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
               +K +   +LDL TG+G + ++L K   F   +  D+S  ALEIA+ NA +N V + 
Sbjct: 113 ----KKENKNSVLDLCTGSGCIAVSLAKLGKFKDIMASDVSGSALEIARENARSNNVLD- 167

Query: 150 FDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + ++S+ FS + G  FD+I+SNPPY+     D L  E++ ++P I+L     GL  Y+ 
Sbjct: 168 INFVKSNVFSGISGKNFDIIISNPPYVSHEEYDALEPELK-YEPEIALAADDSGLFFYKK 226

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           IA    R+LN +G   +E+   +  ++ +IF +     +   KDY G  R+L
Sbjct: 227 IAGKAGRYLNDNGFILIELNAYKAGEIKQIFSTCSYKNIEIVKDYAGLPRML 278


>gi|200389878|ref|ZP_03216489.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199602323|gb|EDZ00869.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 277

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|167464537|ref|ZP_02329626.1| modification methylase, HemK family protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383118|ref|ZP_08056945.1| glutamine methylase of release factor 1-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152780|gb|EFX45406.1| glutamine methylase of release factor 1-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 293

 Score =  123 bits (308), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 5/219 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  ILG +DFY +   ++     PRPETELLV+  + +   R+  +    + D
Sbjct: 68  RKAGGEPVQYILGEQDFYGLPFEVNKAVLIPRPETELLVERII-YEGKRLFPQGSPLLGD 126

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVE 162
           +GTG+GA+ + L    P ++    D+S  ALE+A+ NAV NGV +R   LQ D     VE
Sbjct: 127 IGTGSGAIPVTLAHACPEWRVYSSDLSPLALEVARRNAVRNGVGDRVTLLQGDLLLPYVE 186

Query: 163 -GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            GL  D++VSNPPYI +  +  L  EVR F+P  +L GG DGL  YR + D +     + 
Sbjct: 187 RGLPIDILVSNPPYIPTGDLPALQPEVRQFEPHTALFGGPDGLDLYRRMMDQLGSLPKQP 246

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
            L  +E+G  Q  DV  +      +  V   KD  G DR
Sbjct: 247 ALVGLEVGIGQADDVANLLRGAGDWSSVEYVKDLAGIDR 285


>gi|241895237|ref|ZP_04782533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella paramesenteroides ATCC 33313]
 gi|241871543|gb|EER75294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella paramesenteroides ATCC 33313]
          Length = 286

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 123/239 (51%), Gaps = 8/239 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++VL+D +R     A VR++K  + +   LG   FY     +      PR ETE LV+  
Sbjct: 53  NTVLEDEKRLRFMVA-VRAIKGGQPVQYALGHAAFYGREFQVDRRVLIPRQETEELVEWV 111

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA      E+     +LD+GTG+GA+ ++L  E   +  VG DIS +AL +AK NA    
Sbjct: 112 LADHPTNTEQH----VLDMGTGSGAIAVSLSAERTSWAVVGADISEEALAVAKENAQLYA 167

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S +   LQSD F+ V G FD+IV+NPPYI       +   V  F+P I+L    DGL+ 
Sbjct: 168 PSVQL--LQSDLFTGVTGSFDIIVANPPYISRNEQSLMDESVVMFEPDIALYADDDGLAL 225

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           Y+ +A  +   L   G    EIGY Q   +V +F +    +V   +D  G+DR++   R
Sbjct: 226 YKKMATDLLTFLKPGGAAYFEIGYQQGEKLVDLFSTLPHVIVTLRQDLSGHDRMIKVLR 284


>gi|208779476|ref|ZP_03246821.1| methyltransferase, HemK family [Francisella novicida FTG]
 gi|208744437|gb|EDZ90736.1| methyltransferase, HemK family [Francisella novicida FTG]
          Length = 284

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LA+  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALAIAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFVYIEHGFTQADAIKALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 YNFTHIKTVKDLNNNDR 275


>gi|238913675|ref|ZP_04657512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
          Length = 277

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|307265647|ref|ZP_07547200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389250|ref|ZP_08210818.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter ethanolicus JW 200]
 gi|306919291|gb|EFN49512.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994613|gb|EGD53037.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 279

 Score =  122 bits (307), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 9/216 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H     I+  + F  +   +  +   PRPETE+LV+  L     R+E+ +V  ILD+GTG
Sbjct: 66  HIPYQYIVKKQHFMGLEFFVDENVLIPRPETEILVEEVLK----RVERGNV--ILDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LF 165
           +GA+ +++ K         VDIS KA+E+AK NA   GV +R   ++SD F ++     F
Sbjct: 120 SGAIAVSISKYFADCTVYAVDISKKAIEVAKYNAEKQGVLDRIFFIESDLFRNLPPNLKF 179

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D IVSNPPYI+   ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    
Sbjct: 180 DFIVSNPPYIKRNEIELLQEEVKK-EPIVALDGGEDGLFFYKKIIKEAPFYMKSGGKIGF 238

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY QK ++    E      +   KD  G DRV++
Sbjct: 239 EIGYGQKEEITNFLEKDGFKDIEIIKDLAGIDRVII 274


>gi|269798158|ref|YP_003312058.1| modification methylase, HemK family [Veillonella parvula DSM 2008]
 gi|269094787|gb|ACZ24778.1| modification methylase, HemK family [Veillonella parvula DSM 2008]
          Length = 289

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 123/218 (56%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I+G +DF  +   ++     PRP+TE L++  L  + P   K   +RILD+ T
Sbjct: 71  KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNLRILDVCT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163
           G G + L+LL   P   GVG+DIS  AL +A+ N  +  +S+R   ++SD F ++ G   
Sbjct: 127 GPGTILLSLLHYLPNSSGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKE 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +  +  L  +V + +P I+L GG DGL  YR +A     +LN +G  
Sbjct: 187 KFDLIVSNPPYIRTGDLKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRV 245

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           + E+G++Q  +V  +  E+ +   ++   D GG +RV+
Sbjct: 246 AFEVGFDQAEEVGALLQETGQYSNIHFIADLGGYNRVV 283


>gi|330941683|gb|EGH44458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 277

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 121/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R  K E +  ILG + F+ + L ++  T  PRPETE LV++A
Sbjct: 42  PERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEKLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++   +  +S W S ++G  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 LNN-AEVFESHWLSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSSALVAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G ++R+   C+
Sbjct: 216 DLRTIIEQAPAHLNVDGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLGEHERITFGCK 275


>gi|294792025|ref|ZP_06757173.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 6_1_27]
 gi|294457255|gb|EFG25617.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 6_1_27]
          Length = 289

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I+G +DF  +   ++     PRP+TE L++  L  + P   K   VRILD+ T
Sbjct: 71  KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163
           G G + L+LL   P   GVG++IS  AL +A+ N     +++R   L+SD FS++ G   
Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISIDALLVAEENGERFNLNDRVQFLESDMFSALAGNAE 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +  V  L  +V + +P I+L GG DGL  YR +A     +LN +G  
Sbjct: 187 KFDLIVSNPPYIRTGDVKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRV 245

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           + E+G++Q  +V  +  E+ +   +    D GG++RV+
Sbjct: 246 AFEVGFDQAKEVGALLQETGQYSNIQFIADLGGHNRVV 283


>gi|301299953|ref|ZP_07206180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852435|gb|EFK80092.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 279

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D    +C   G    Q++++  + +DD+    L   I    +   +  ++G++DFY 
Sbjct: 23  TLEDVDYLICGQMGWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      +
Sbjct: 83  LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       
Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF+  
Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDN 256

Query: 243 -KLFLVNAFKDYGGNDRVL 260
                +   KD  GNDR++
Sbjct: 257 FPNSEITLKKDINGNDRMI 275


>gi|260779384|ref|ZP_05888276.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260605548|gb|EEX31843.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 289

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 11/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  PD +LD          + R +  E +  I G R+F+++ L
Sbjct: 29  DAAVLLCHTLNKPRSFLLTWPDKILDSEAILAFEANLQRRINGEPVAYITGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ AL  ++      +   ILDLGTGTGA+ LA+  E P  +  
Sbjct: 89  KVAPSTLIPRPDTERLVEIALEKAV-----ENQGDILDLGTGTGAIALAIASELPNRQVW 143

Query: 126 GVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           GVD+  +A ++A+SNA   G+ + +F  L   WF  V     F +IVSNPPYIE      
Sbjct: 144 GVDLKQEAKQLAESNAEHLGIRNTQF--LSGSWFEPVGTGTKFALIVSNPPYIEEHDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  + I+      L  DG    E GY+Q + V  I  S 
Sbjct: 202 AQGDVR-FEPLSALVAKDNGLADIKHISSQALSFLQCDGWLMFEHGYDQGMAVREILGSL 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +  +KDYG NDRV +
Sbjct: 261 GYQNITTYKDYGENDRVTI 279


>gi|291547176|emb|CBL20284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus sp. SR1/5]
          Length = 295

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 124/244 (50%), Gaps = 14/244 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + V D+    +LT  I R   H  + ++     F      ++ +   PR +TE LV+ AL
Sbjct: 48  EPVSDETAAEYLT-LIDRRAGHIPVQQLTHQAFFMGYEFYVNENVLIPRQDTETLVEEAL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L  +EK +   ILD+ TG+G + L+LL E     G GVD+S +ALE+AK NA    V
Sbjct: 107 K-HLGNVEKPE---ILDMCTGSGCILLSLLLERQDACGTGVDVSPEALEVAKKNAGILKV 162

Query: 147 SERFDTLQSDWFSSV---------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             R D ++SD FS+           G +D+++SNPPYI +  ++ L  EVR  DPR +LD
Sbjct: 163 ENRADFVESDLFSAPYFCEKGGKDSGKYDILISNPPYIATEEIETLMEEVRLHDPRKALD 222

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           G  DGL  YR I     R+L   G    EIG  Q   V  + ++     V   KD  G D
Sbjct: 223 GMEDGLYFYRKITAEAGRYLKPGGWLLYEIGCTQGEAVSTMMKAAGFTGVQIVKDLPGLD 282

Query: 258 RVLL 261
           RV+L
Sbjct: 283 RVVL 286


>gi|17547622|ref|NP_521024.1| methyltransferase [Ralstonia solanacearum GMI1000]
 gi|17429926|emb|CAD16610.1| probable methylase of polypeptide chain release factors protein
           [Ralstonia solanacearum GMI1000]
          Length = 306

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 126/260 (48%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+    
Sbjct: 42  EARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFGRMF 101

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ AL     RI+ RD   +LDLGTG+G  AV +AL +     +
Sbjct: 102 QVTPAVLIPRPDTELLVEQALD----RIDDRDAPAVLDLGTGSGIIAVTIALARRD--AR 155

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178
               D S  AL +A  NA   G +     L  DW++++       +FD+IVSNPPYI S 
Sbjct: 156 VWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAST 214

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +
Sbjct: 215 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 273

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                   V   +D  G+DR
Sbjct: 274 LADAGFADVFTAQDLTGHDR 293


>gi|309800292|ref|ZP_07694465.1| HemK protein [Streptococcus infantis SK1302]
 gi|308116076|gb|EFO53579.1| HemK protein [Streptococcus infantis SK1302]
          Length = 278

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 12/217 (5%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H     I+G  +F+ ++L +      PRPETE LV+  LA +       + +++LD+GTG
Sbjct: 65  HIPAQYIIGHAEFFGMQLEVDERVLIPRPETEELVELILAEN-----PEENLKVLDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ LAL K  P +     DIS  AL++A  NA   G++  F  ++S+ FS +   +D+
Sbjct: 120 SGAIALALAKNRPDWTITAADISQDALDLAMENADNLGLTLFF--IKSNCFSEISSKYDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI  V    +GL V   +P ++L    DGL+ YR IA+    +LN  G   +EI
Sbjct: 178 IVSNPPYISRVDEAEVGLNVLHSEPHLALFADEDGLAIYRRIAEESKDYLNDGGKIYLEI 237

Query: 228 GYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261
           GY Q   V  +F  +K F    V   KD  G DR+++
Sbjct: 238 GYKQGQSVPALF--KKNFPEKRVRTLKDQFGQDRMVV 272


>gi|294101725|ref|YP_003553583.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aminobacterium colombiense DSM 12261]
 gi|293616705|gb|ADE56859.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aminobacterium colombiense DSM 12261]
          Length = 286

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 133/267 (49%), Gaps = 11/267 (4%)

Query: 2   QALRDSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A  ++  FLC +  +S S  +++  +  L + +   L   + R +  E +  I+G+  F
Sbjct: 26  RAESETEWFLCSLKEISRSRFLLIASEVYLTEEEVISLNQMVQRRISGEPLQYIIGYESF 85

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     +      PRPETEL+V+ AL + +           LD GTG+G +   +L E P
Sbjct: 86  WGRDFLVGPGCLIPRPETELVVEEALRYFVKG-------SFLDWGTGSGCIAATILAERP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
             +GV +++S +A+E A  N     +  R     S   S +       D+I+SNPPYI +
Sbjct: 139 LSRGVAIEVSPQAIEWAWKNLRRYNLLHRCLLWHSREMSDIPVPSQSLDLIISNPPYIPT 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV  ++P ++LDGG DGL +Y+ +       L   G+  VE+G + + +V+ 
Sbjct: 199 AAIGRLMKEVAGYEPYVALDGGEDGLLYYKELLHVAPIWLKPGGMLVVELGDSTQGEVLA 258

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +  L L+   KD+ G  R+ ++CR
Sbjct: 259 NYNALGLRLMKLAKDFQGIYRIAVWCR 285


>gi|168260000|ref|ZP_02681973.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|205350947|gb|EDZ37578.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
          Length = 277

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRRFG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|331008867|gb|EGH88923.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 277

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 7/240 (2%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRPETE+LV++A
Sbjct: 42  PERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWKLDLEVAPHTLIPRPETEMLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  + P        ++LDLGTGTGA+ LAL  E   +K   VD   +A+ +A+ N     
Sbjct: 102 LELA-PAFAP---AKVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVALAERNRQRLQ 157

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L   WFS++EG  FD+I+SNPPYI          +VR F+P  +L  G DGL 
Sbjct: 158 L-DNAQVLNRHWFSALEGQQFDLIISNPPYIADADPHLSAGDVR-FEPSSALTAGSDGLD 215

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             RTI      HL+ DG   +E GY+Q   V  +        +   +D G ++R+   C+
Sbjct: 216 DLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIRHGFERIQTRRDLGEHERITFGCK 275


>gi|251789677|ref|YP_003004398.1| modification methylase, HemK family [Dickeya zeae Ech1591]
 gi|247538298|gb|ACT06919.1| modification methylase, HemK family [Dickeya zeae Ech1591]
          Length = 283

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  +TG     ++   ++ L D +   L + + R +  E I  ++G+R+F+++ 
Sbjct: 22  RDAEILLEHITGKGRTFLLAFGETELMDSEYQTLESLLARRVTGEPIAYLIGYREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         ++DLGTGTGA+ LA+  E P  + 
Sbjct: 82  LAVSPVTLIPRPDTECLVEHALAH-LP----AGASSVVDLGTGTGAIALAIAHERPDCRV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
           VGVD    A+ +A  NA    ++     L  DWFS + G  F +IVSNPPYI+       
Sbjct: 137 VGVDRQHDAVVLASHNARRLEINNA-QFLPGDWFSPLAGQRFSLIVSNPPYIDEHDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    DGL+  R I       L  DG   +E G+ Q   V  +     
Sbjct: 196 RGDVR-FEPASALVAAEDGLADLRQIIRQAGTFLLDDGWLLLEHGWQQGQAVRALLSQYG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V  ++DYG N+RV L
Sbjct: 255 FAQVKTYRDYGDNERVTL 272


>gi|87124890|ref|ZP_01080737.1| SAM (and some other nucleotide) binding motif protein
           [Synechococcus sp. RS9917]
 gi|86167210|gb|EAQ68470.1| SAM (and some other nucleotide) binding motif protein
           [Synechococcus sp. RS9917]
          Length = 299

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 12/222 (5%)

Query: 46  LKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVV 99
           L+HE +  ++G   WRD     LT+S+    PR ETE LVD AL     + P    + ++
Sbjct: 73  LQHEPLQHLVGRCPWRDL---ELTVSAAALIPRQETESLVDLALERWRAAQPGASPQPLL 129

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R  DLGTG+GA+ +AL +  P   G  VD S  AL +A+ N   +GVS R      DW+ 
Sbjct: 130 RWADLGTGSGALAVALARAFPQASGHAVDCSEAALALARLNLERHGVSARCTLHSGDWWQ 189

Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +    GL  +++SNPPYI S +VD L   VR+ +PR++LDGG DGL+  R I  G    
Sbjct: 190 PLRPWWGLLQLVLSNPPYIPSAVVDQLDPVVREHEPRLALDGGADGLAATRLIVAGAPEA 249

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           L   G   +E  ++Q   V+ +  +  L  + A  D+ G  R
Sbjct: 250 LAPGGWLLIEHHHDQSAAVLDLCAAAGLDHLKAETDWQGVRR 291


>gi|297582071|ref|ZP_06943990.1| hemK protein [Vibrio cholerae RC385]
 gi|297533766|gb|EFH72608.1| hemK protein [Vibrio cholerae RC385]
          Length = 286

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAIHNAL-FLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAEENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|239817176|ref|YP_002946086.1| modification methylase, HemK family [Variovorax paradoxus S110]
 gi|239803753|gb|ACS20820.1| modification methylase, HemK family [Variovorax paradoxus S110]
          Length = 283

 Score =  122 bits (306), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 12/256 (4%)

Query: 6   DSHSFLCRVTGLSSHQ---VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L    G + H    ++      L D     L+  + R L  E +  +LG ++F+ 
Sbjct: 27  DAQLLLLHALGRAPHDRAWLLAHDTDTLSDAAWSALSAQLPRRLAGEPVAYLLGEKEFHG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + +    PRP+TE LVD    ++L  +E RD  R+LDLGTG+GA+ LAL    P  
Sbjct: 87  LGLQVDARVLVPRPDTETLVD----WALQCLEGRDAPRVLDLGTGSGAIALALQHARPDA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VD S  AL +A++NA   G+  RF   Q+ W     G + VI SNPPYI +     
Sbjct: 143 LVDAVDASADALAVAEANAQRLGLPVRFR--QAHWLDGAAGGYAVIASNPPYIAAGDPHL 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             L+    +P  +L  G DGL+  R I      HL   G   +E G++Q   V ++  +R
Sbjct: 201 AALQ---HEPLAALVAGPDGLADIRQIVQQAPAHLADGGWLLLEHGHDQAAAVRQLLGAR 257

Query: 243 KLFLVNAFKDYGGNDR 258
               V +  D  G  R
Sbjct: 258 GFAEVQSRDDLAGIQR 273


>gi|15677887|ref|NP_275055.1| hemK protein [Neisseria meningitidis MC58]
 gi|7227327|gb|AAF42384.1| hemK protein [Neisseria meningitidis MC58]
          Length = 423

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415


>gi|168491916|ref|ZP_02716059.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC0288-04]
 gi|183573762|gb|EDT94290.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC0288-04]
          Length = 279

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 121/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPAWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+  + +L   G   +EIGY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273


>gi|291550092|emb|CBL26354.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus torques L2-14]
          Length = 312

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 10/265 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG++  +  +DPD  +D          + +   H  +  I G ++F  +  
Sbjct: 43  DAWYLLEFVTGITKARYYMDPDQSMDPEAWKKYKEYLEKRRNHIPLQHITGSQEFMGLEF 102

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALL----KESP 120
            ++     PR +TE+LV+ AL      I   +  +++LD+ TG+G + L+++    ++  
Sbjct: 103 LVNEHVLIPRQDTEVLVEEALEMMKQEIFRSKGCLQLLDMCTGSGCILLSVMHYAEQKGI 162

Query: 121 FFKGVGVDISCKALEIAKSN-----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           F +G GVD S +AL +A+ N     +     + + + + SD F +V   +D+I+SNPPYI
Sbjct: 163 FIEGTGVDFSEQALMVAQKNEKHLRSTKKDENGKVNWILSDLFENVSETYDMILSNPPYI 222

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  ++ L  EV+  DP  +LDG  DGL  YR I     + L   G+ + EIGY+Q  +V
Sbjct: 223 RTAEIEKLQDEVKLHDPFSALDGKEDGLYFYRKIVTDAKQFLKTGGILAFEIGYDQGKEV 282

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260
             + +      V   KD  G DR++
Sbjct: 283 SDLMKKAGYDKVFVKKDLAGLDRIV 307


>gi|212697118|ref|ZP_03305246.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675893|gb|EEB35500.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 120/209 (57%), Gaps = 8/209 (3%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G  +FY + L +      PR ETE+LVD  +   +    K+D  +ILD+G+G+GA+ LA
Sbjct: 62  IGKWNFYGLDLLVDKRALIPRYETEILVDLIINDKV----KKD--KILDIGSGSGAISLA 115

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L       K +GVDIS  A+ ++  N   N   +  +  +SD FS+VEG FD+IVSNPPY
Sbjct: 116 LSYNLKNSKVLGVDISKDAINLSNENK-KNLSIKNVEFKESDIFSNVEGKFDIIVSNPPY 174

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I     + L  ++  ++P+ +L GG DGL  YR I     + LNK+G   +EIGY+QK  
Sbjct: 175 INKEDFENLDKKLS-YEPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNP 233

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++++ +      + A+KD+   DR++  C
Sbjct: 234 IIKLLKEEGYKDIRAYKDFNDFDRIIKAC 262


>gi|307706537|ref|ZP_07643344.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus mitis SK321]
 gi|307617992|gb|EFN97152.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus mitis SK321]
          Length = 278

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      ++  ++ F+     +   H+    I+G  DFY ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVNKEEKQFVKGIFQQLAAHKPAQYIIGQTDFYGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           LT+      PRPETE LV   LA + P       + +LD+GTG+GA+ LAL K  P +  
Sbjct: 82  LTVDERVLIPRPETEELVGLILAEN-PETN----LSVLDIGTGSGAIALALAKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  AL++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQDALDLANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F     
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           E R    V   KD  G DR+++
Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272


>gi|121635723|ref|YP_975968.1| hemk protein [Neisseria meningitidis FAM18]
 gi|120867429|emb|CAM11201.1| hemk protein [Neisseria meningitidis FAM18]
          Length = 423

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  +LGWR+FY  R  ++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 204 RRLNGEPVAYLLGWREFYGRRFAVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  +LE A+ NA   G   R +     WF +   
Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMP 315

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415


>gi|84394466|ref|ZP_00993180.1| HemK protein [Vibrio splendidus 12B01]
 gi|84374907|gb|EAP91840.1| HemK protein [Vibrio splendidus 12B01]
          Length = 290

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 127/272 (46%), Gaps = 25/272 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173
           G+D+  +A ++A  NA    +TN        L   WF  +           F +IVSNPP
Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSASSEEEAVKFSLIVSNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YIE         +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q +
Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARDFLENEGWLAFEHGYDQGL 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263
            V  I +      V   KDYGGNDRV L  +C
Sbjct: 258 AVREIMQQLGYLDVVTEKDYGGNDRVTLGRYC 289


>gi|332678839|gb|AEE87968.1| modification methylase, HemK family [Francisella cf. novicida Fx1]
          Length = 255

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 10/251 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +L ++ D
Sbjct: 3   ICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQKLYVTKD 62

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           T  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    + V VD+
Sbjct: 63  TLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQVVAVDL 118

Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
             ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    + +   V
Sbjct: 119 YQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN-IDQSV 175

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +D++P  +L    +GL+  + I       LN  G   +E G+ Q   V  +F       +
Sbjct: 176 KDYEPARALFAADNGLADIKIIISQAKDFLNPRGFIYIEHGFTQADAVTALFSQYNFTHI 235

Query: 248 NAFKDYGGNDR 258
              KD   NDR
Sbjct: 236 KTVKDLNNNDR 246


>gi|260554586|ref|ZP_05826807.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Acinetobacter baumannii ATCC 19606]
 gi|260411128|gb|EEX04425.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Acinetobacter baumannii ATCC 19606]
          Length = 273

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 114/215 (53%), Gaps = 12/215 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GY+Q   V  +F +     +   +DYG NDRV L
Sbjct: 233 HGYDQGQAVRNVFAAHGFSEIKTIQDYGQNDRVTL 267


>gi|284921024|emb|CBG34089.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Escherichia coli 042]
          Length = 277

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|168241357|ref|ZP_02666289.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194447419|ref|YP_002045818.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194405723|gb|ACF65942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|205339433|gb|EDZ26197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
          Length = 277

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 133/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRFG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|148984975|ref|ZP_01818218.1| HemK protein [Streptococcus pneumoniae SP3-BS71]
 gi|147922673|gb|EDK73790.1| HemK protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799987|emb|CBW32577.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
          Length = 279

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL++A  NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLANENAKNQNLQ 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273


>gi|204927633|ref|ZP_03218834.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322975|gb|EDZ08171.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 277

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLAELLQRRRQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAFFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YSDVETCRDYGGNERV 270


>gi|187931104|ref|YP_001891088.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712013|gb|ACD30310.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 284

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETIV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 CNFTDIKIVKDLNNNDR 275


>gi|170731834|ref|YP_001763781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia cenocepacia MC0-3]
 gi|169815076|gb|ACA89659.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia cenocepacia MC0-3]
          Length = 280

 Score =  122 bits (306), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LD    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAIERYRALEA--RRVAGEPVAQLVGTREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G S +L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGASAYLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           I  S     V +  D    +R 
Sbjct: 252 ILASHGFVAVESLADLAAIERT 273


>gi|159896800|ref|YP_001543047.1| HemK family modification methylase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889839|gb|ABX02919.1| modification methylase, HemK family [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 283

 Score =  122 bits (306), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 136/262 (51%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V GL+  Q++   +  L   Q       I R    E I  ++G R+FY +  
Sbjct: 27  DARVLLGHVLGLTQTQILAAFNDQLSTEQVEQFQGLIERRSALEPIAYLIGSREFYGLMF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV+ AL +   + ++R +V + D+GTG+G + +A+ K +P  K  
Sbjct: 87  NVDRRVLVPRPDTEILVEQALTWI--KQQQRPLV-VADIGTGSGCIAVAVTKHAPTIKMY 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VD+S  AL +A+SN   +G+ ++ + +  D  S +    D+++SNPPY    ++D +  
Sbjct: 144 AVDLSPAALAVAQSNVERHGLQQQIELIHGDGVSQLPEPIDLLLSNPPY---TLLDEIEP 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGYNQKVDVVRI---- 238
            VR  +P ++LDGG DGL  YR +    +  L + GL S    EIG  Q  +V+ +    
Sbjct: 201 GVRLHEPTLALDGGPDGLDCYRQLLPATAAIL-RQGLPSAALFEIGAWQGSEVIALAQAS 259

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F   K+ LV   +D    DRV+
Sbjct: 260 FPQAKIQLV---RDLAARDRVV 278


>gi|26987470|ref|NP_742895.1| methyl transferase [Pseudomonas putida KT2440]
 gi|24982134|gb|AAN66359.1|AE016264_3 methyl transferase [Pseudomonas putida KT2440]
          Length = 276

 Score =  122 bits (306), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 8/214 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG + F+ + L ++  T  PRP+TELLV++AL      ++     ++LDLGTGT
Sbjct: 65  EPVAYILGLQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPASPAKVLDLGTGT 119

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167
           GA+ LAL  E P ++   VD   +A  +A+ N    G++     L S WF S+    FD+
Sbjct: 120 GAIALALASERPAWQVTAVDRVEEAAALAERNRQRLGLANARVRL-SHWFDSLAAERFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI +     +  +VR F+P  +L  G DGL   R IA     HL   G   +E 
Sbjct: 179 IVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEH 237

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY+Q   V  +        V +  D GG++R+ L
Sbjct: 238 GYDQAAAVRALLAEHGFIEVASRTDLGGHERITL 271


>gi|332200608|gb|EGJ14680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA41317]
          Length = 279

 Score =  122 bits (306), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL++A  NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273


>gi|297568590|ref|YP_003689934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurivibrio alkaliphilus AHT2]
 gi|296924505|gb|ADH85315.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurivibrio alkaliphilus AHT2]
          Length = 299

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 134/254 (52%), Gaps = 14/254 (5%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L++ Q + +P      RQR  L  A+ R    E +  I+G  +F+++   +      PRP
Sbjct: 50  LAAEQPLAEPL-----RQR--LQAALKRRESREPLAYIMGEWEFWSLPFAVGPAVLIPRP 102

Query: 77  ETELLVDSALAF--SLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           ETELLV+ ALAF   L R    R   RILDLGTG+G + + L +E    + V +D S  A
Sbjct: 103 ETELLVEQALAFVRQLQRPPGGRYPWRILDLGTGSGILAVVLAREIASAQVVALDRSPAA 162

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           L +A++NA  +GV+E+   + SDW S++     FD++V+NPPY+    +  L  EVR+ +
Sbjct: 163 LAMARANARRHGVAEKITFVGSDWLSALAARPAFDLVVANPPYVCRSAMLTLQPEVREHE 222

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAF 250
           P  +LDGG  GL   + I   +   L  DGL  +EIG++QK     +F     +      
Sbjct: 223 PHTALDGGRQGLDDIKIICRDLPAVLRPDGLLLLEIGWDQKTAAAELFNRNPAYRQTEII 282

Query: 251 KDYGGNDRVLLFCR 264
            D  G  RV L CR
Sbjct: 283 NDLAGLPRV-LRCR 295


>gi|264676910|ref|YP_003276816.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
 gi|262207422|gb|ACY31520.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
          Length = 291

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 11/213 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           + G ++FY + L + S   +PRP+TE LVD AL      + +R  VR++DLGTG+GA+ L
Sbjct: 84  LTGNKEFYGLDLAVDSRVLDPRPDTETLVDWALEL----MPERQPVRVIDLGTGSGAIAL 139

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSN 171
           AL  + P  + + VD S  AL +A+SNA    +  +F      W   ++GL   D+IVSN
Sbjct: 140 ALQSQRPSARVIAVDASADALAVARSNAARLQLPVQF--AHGSWLEPLDGLEPVDLIVSN 197

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI +   D   L     +P  +L  G DGL   R+I D     L   G    E G++Q
Sbjct: 198 PPYIRA---DDPHLAALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQ 254

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             DV R+ ++     V    D  G  R    CR
Sbjct: 255 AEDVARLMQAAGFEQVQHRHDLAGIARCTGGCR 287


>gi|218704734|ref|YP_002412253.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|293404755|ref|ZP_06648747.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298380398|ref|ZP_06989997.1| HemK protein [Escherichia coli FVEC1302]
 gi|300896600|ref|ZP_07115119.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           198-1]
 gi|218431831|emb|CAR12716.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli UMN026]
 gi|291426963|gb|EFE99989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298277840|gb|EFI19354.1| HemK protein [Escherichia coli FVEC1302]
 gi|300359543|gb|EFJ75413.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           198-1]
          Length = 277

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|323964711|gb|EGB60182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863]
 gi|327253902|gb|EGE65531.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli STEC_7v]
          Length = 277

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQS+WFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAIALAQRNA-QNLAIKNIHILQSNWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V ++F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQVFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|226525304|gb|ACO70903.1| protein-(glutamine-N5) methyltransferase release factor-specific
           [uncultured Verrucomicrobia bacterium]
          Length = 280

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 130/251 (51%), Gaps = 9/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G    ++ ++ D  L D++   L + + +  + E +  +LG  +F         
Sbjct: 30  LLAHVLGKRRMELYLEFDRPLGDQELNPLRDLVKKRAQGEPLQHLLGTAEFCGRTFGCDR 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGV 127
               PRPETE L +  +A      +KR V   RILD+GTG+G + L L    P      V
Sbjct: 90  RALVPRPETEQLCELVVA----EFKKRSVSPRRILDVGTGSGVIALTLAMTWPDAAMEAV 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S +AL +A+ NA   G+++R   ++SD F++VEG FD++V+N PYI+  ++  +  EV
Sbjct: 146 DVSPEALTLARENAARLGLADRIRLVESDLFAAVEGEFDLVVANLPYIDQGVIPTVTREV 205

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +  DPR +LDGG  G+  +       ++HL   G+ ++EIG++Q   V  +  +     +
Sbjct: 206 QR-DPRTALDGGEGGMRVFERFIPAATQHLR--GMLALEIGHDQSDPVRALLAAHNYQDI 262

Query: 248 NAFKDYGGNDR 258
               DY G +R
Sbjct: 263 RVVSDYQGRNR 273


>gi|254291409|ref|ZP_04962202.1| hemK protein [Vibrio cholerae AM-19226]
 gi|150422739|gb|EDN14693.1| hemK protein [Vibrio cholerae AM-19226]
          Length = 286

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAALLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLSL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|113971502|ref|YP_735295.1| HemK family modification methylase [Shewanella sp. MR-4]
 gi|113886186|gb|ABI40238.1| modification methylase, HemK family [Shewanella sp. MR-4]
          Length = 286

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 8/254 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+  FL      S   +   P+  L   Q       + R  +   +  I+G R+F+++  
Sbjct: 28  DAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE+LV++AL   L         ++LDLGTGTGA+ LAL  E   ++  
Sbjct: 88  IVNDTTLIPRPDTEILVETALNLPL-----ESNAKVLDLGTGTGAIALALASERATWQIT 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD    A+ +AK+N  TN   E+ + LQSDWFS+++   FD+IVSNPPYI+        
Sbjct: 143 AVDKVEDAVALAKANR-TNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +         
Sbjct: 202 GDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGY 260

Query: 245 FLVNAFKDYGGNDR 258
             V   +D+G NDR
Sbjct: 261 QNVATVRDFGSNDR 274


>gi|42519929|ref|NP_965844.1| HemK family modification methylase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42409666|gb|AAS13778.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 279

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 139/260 (53%), Gaps = 8/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D    +  V G+    +IV+  D V  +++  F      R+ ++  I +I+G R+F++  
Sbjct: 26  DCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E ++ + L +  P   K+  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETIILAVLKY-YPN--KKQKLKIADFGTGTGCLLISVLSEYEYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S +A ++A  N   + +  R     S W +   G FD+I+SNPPYI+   +  L 
Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +PRI+LDGGIDGLS Y +I   + + L K+G   +EIG +Q  ++ +I  S +L
Sbjct: 201 AEVQK-EPRIALDGGIDGLSCYLSIFPILRKCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R ++  R
Sbjct: 259 AFQEYVYDLAGMKRCIVVKR 278


>gi|316983955|gb|EFV62934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis H44/76]
          Length = 410

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 114/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 191 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 244

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 245 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 302

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 303 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 361

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 362 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 402


>gi|297618445|ref|YP_003703604.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297146282|gb|ADI03039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 296

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 137/261 (52%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V G+    + V+    ++  +R      I R ++ E +  + G ++F+++  
Sbjct: 29  EAELLLAYVLGIDRVGLYVNYYQPVNQDERSCYREIIKRRVQGEPVAYLTGKKEFFSLEF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S +   PR ETE++V+ A+A           + + D+GTG GA+ +AL    P  + V
Sbjct: 89  DVSPEVLIPRAETEVMVEKAIAIGR---GMGGSLWVADVGTGCGAIAIALAVYLPNARIV 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            +DIS  A+E+A+ NA    V +R D +  D  + +       D++V+N PY+ +   + 
Sbjct: 146 AIDISSAAVELARKNARRYQVHDRIDFMVGDLLTPLGQDNAGLDIVVANLPYVPTNEWEN 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L LEV++F+PRI+LDGG DGL++YR +     + L + G   VEI +NQ   ++ + +  
Sbjct: 206 LALEVKEFEPRIALDGGADGLAYYRRLMPQARQCLREGGYILVEIAWNQGPAMLSLMQH- 264

Query: 243 KLFL--VNAFKDYGGNDRVLL 261
             F   V   +D  G DRV++
Sbjct: 265 --FFDEVEVGQDLAGRDRVVV 283


>gi|229513824|ref|ZP_04403286.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA
           21]
 gi|229349005|gb|EEO13962.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA
           21]
          Length = 286

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|293409599|ref|ZP_06653175.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
 gi|331672744|ref|ZP_08373530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA280]
 gi|291470067|gb|EFF12551.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
 gi|331069965|gb|EGI41334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA280]
          Length = 277

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGHQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|324994441|gb|EGC26354.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK678]
          Length = 276

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA + G++  F  +QSD   ++ G F
Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCGLNLAF--VQSDCLDAISGNF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           EIGY Q   +  + E       +   KD  G DR++
Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271


>gi|115350467|ref|YP_772306.1| HemK family modification methylase [Burkholderia ambifaria AMMD]
 gi|115280455|gb|ABI85972.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 280

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ L+    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLEPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G    L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAFLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  SR    V +  D    +R 
Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273


>gi|85375681|ref|YP_459743.1| protein chain release factor methylase subunit [Erythrobacter
           litoralis HTCC2594]
 gi|84788764|gb|ABC64946.1| protein chain release factor methylase subunit [Erythrobacter
           litoralis HTCC2594]
          Length = 283

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 17/210 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L HE +  I G ++F+     ++ D   PR ++E +V++ALA      E  +  R+
Sbjct: 57  VARRLHHEPLAYITGGQEFFGRGFIVTPDVLIPRSDSEQVVEAALA------EMGEGARV 110

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           LDLGTG+GA+ + LL E P   G G+D S  AL +A +NA  NGV++R   L++DW    
Sbjct: 111 LDLGTGSGALLVTLLAEHPDATGTGIDASLAALPVAAANAARNGVADRACLLKADWREPG 170

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           ++   G FD++++NPPY+E      L   VR F+PR +L  G +GL  YR I   +S  L
Sbjct: 171 WTDDLGQFDLVIANPPYVEDNA--ALDASVRKFEPRAALYSGPEGLDDYRAIIPQLSSLL 228

Query: 218 NKDGLCSVEIGYNQKVDVVRI-----FESR 242
           + DG+  +EIGY Q   V  I     FESR
Sbjct: 229 SSDGVAVLEIGYRQADAVGTIAEENGFESR 258


>gi|301017244|ref|ZP_07182025.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
 gi|300400375|gb|EFJ83913.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
          Length = 277

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|254374924|ref|ZP_04990405.1| modification methylase [Francisella novicida GA99-3548]
 gi|151572643|gb|EDN38297.1| modification methylase [Francisella novicida GA99-3548]
          Length = 284

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  + I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIKIIISQSKYFLNPRGFIYIEHGFTQADAITVLFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 YNFTDIKTVKDLNNNDR 275


>gi|115315349|ref|YP_764072.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18]
 gi|254369839|ref|ZP_04985849.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|115130248|gb|ABI83435.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18]
 gi|157122798|gb|EDO66927.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 284

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 CNFTDIKIVKDLNNNDR 275


>gi|332360649|gb|EGJ38458.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK49]
          Length = 276

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LVD  L+ + P       + +LD+G
Sbjct: 63  LVHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVDLILSEN-PETS----LSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA ++G++  F  +QSD   +++  F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSGDALSLATENAQSSGLNLVF--VQSDCLDAIQRKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           EIGY Q   +  + E       +   KD  G DR++
Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271


>gi|258512738|ref|YP_003186172.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257479464|gb|ACV59783.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 313

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/234 (35%), Positives = 126/234 (53%), Gaps = 26/234 (11%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           ++ E +  +LG +DFY     +  D   PRP+TE+LV+ A+ F L R+      R++D+G
Sbjct: 80  VQGEPLAYVLGKQDFYGRTFEVGPDCLIPRPDTEVLVEEAIRF-LKRMPSG--TRVIDVG 136

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEG 163
           TG+G + +++    P      VD+S  AL +A+ NA      ERF  +  DW ++  +E 
Sbjct: 137 TGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA------ERFGAV-VDWAAADGIEW 189

Query: 164 LFD---------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           L +          IVSNPPYI +  +D L   VRD++PR++LDGG DGL  YR +A  + 
Sbjct: 190 LIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMA-ALP 248

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFES--RKLFLVNAFKDYGGNDRVLLFCR 264
            ++   G   V  E+G+NQ  +V R+F     + F V   KD  G DRV+   R
Sbjct: 249 PYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTR 302


>gi|315924272|ref|ZP_07920496.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622433|gb|EFV02390.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 283

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 14/224 (6%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           ++ P+  L   Q     NAI R   HE    I G R+F  +   +++    PRP+TE +V
Sbjct: 48  LMHPEIPLSSEQIRAFANAIKRRSAHEPSAMITGHREFMGLDFDVNAHVLIPRPDTENIV 107

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ALA+    I KR    +LDL  G+GA+ +AL    P  +    DIS +AL IAKSNA 
Sbjct: 108 ETALAW----ISKRSRPEVLDLCCGSGAIGIALKNCCPNIQLWLSDISKEALAIAKSNAQ 163

Query: 143 TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            + +  +   +  D F   EGL     FD+IV+NPPYI +  +  L  ++++++PR++LD
Sbjct: 164 KHHIEAQL--ILGDLF---EGLLPGQRFDMIVTNPPYIPTDEIADLSPDIKNYEPRVALD 218

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           GG DG   Y+ +   V  HL + G   +E G+NQ   ++ +  S
Sbjct: 219 GGEDGYDFYKRLFASVHDHLKEQGYLVLECGWNQADTLIDMAHS 262


>gi|126728794|ref|ZP_01744609.1| modification methylase, HemK family protein [Sagittula stellata
           E-37]
 gi|126710724|gb|EBA09775.1| modification methylase, HemK family protein [Sagittula stellata
           E-37]
          Length = 281

 Score =  122 bits (305), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 13/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           RD+   +  V  +   ++ +  P+ V  + +  +LT  I R      +  ++G R FY  
Sbjct: 24  RDARRLMAHVLKVPPGRLTLFLPEEVDPELEVVYLT-LIERRADRVPVSHLVGRRAFYGR 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ +  +PRPETE L++ AL+             +LDLGTG+G + L LL E     
Sbjct: 83  DFLVTPEVLDPRPETETLIEVALS--------EPFGTVLDLGTGSGCILLTLLAERDDAV 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIV 180
           G G D+S  AL +A  N     +  R +  +  W+ +   ++ LFD+IVSNPPYI    +
Sbjct: 135 GYGTDVSASALNVAHWNRNALNLEGRAEFCEGSWYGALGQMDELFDLIVSNPPYIAVNEM 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD +PR++L    DG + Y  I  G +R L   G    EIG  Q + V ++F 
Sbjct: 195 PFLSPEVRDHEPRLALTDEADGQTAYHAILAGHARWLAPGGRLVAEIGATQGMAVSKLFA 254

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
              L  V    D  G DRV++
Sbjct: 255 RAGLRGVRVIPDIDGRDRVVV 275


>gi|270292698|ref|ZP_06198909.1| N5 glutamine methyltransferase, release factor-specific protein
           [Streptococcus sp. M143]
 gi|270278677|gb|EFA24523.1| N5 glutamine methyltransferase, release factor-specific protein
           [Streptococcus sp. M143]
          Length = 278

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 130/263 (49%), Gaps = 19/263 (7%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      + + ++ F+     +   H+    I+G  DF+ ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVTEEEKQFVEEIFQQLAAHKPAQYIIGQADFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L +      PRPETE LV+  LA      E  D  +++LD+GTG+GA+ LAL K  P + 
Sbjct: 82  LKVDERVLIPRPETEELVELILA------ENSDENLKVLDIGTGSGAIALALAKNRPDWS 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDIS  AL++A  NA        F   +SD F+ +   +D+IVSNPPYI       +
Sbjct: 136 VTAVDISQDALDLATENAKVQNFQIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEV 193

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF---- 239
           GL V   +P ++L    DGL+ YR IA+     L   G   +EIGY Q   V  +F    
Sbjct: 194 GLNVLHSEPHLALFADEDGLAIYRRIAEDAKDFLTDGGKIYLEIGYKQGQSVPALFRKHL 253

Query: 240 -ESRKLFLVNAFKDYGGNDRVLL 261
            E R    V   KD  G DR+++
Sbjct: 254 PEKR----VRTLKDQFGQDRMVV 272


>gi|168334107|ref|ZP_02692320.1| modification methylase, HemK family protein [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 281

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  +       +I++ D ++++         I R   HE +  I  +++F  
Sbjct: 23  ATRDARLLLMHLLSCDRATLIINNDKLVEEEIVATYFKYIDRRKNHEPLQYITHYQEFMG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +  +   PR +TELLV+  +A              L++G G+G + ++LL      
Sbjct: 83  LPFYVDQNVLIPRQDTELLVEKLIALPWNHHPIG-----LEIGVGSGCISVSLLHYISNL 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V  DIS  AL+IA  NA  N    R   + SD F ++ +  FD IVSNPPYI    ++
Sbjct: 138 TMVCSDISQAALDIAAKNASINACIPRIKFVHSDLFXNIPQQKFDFIVSNPPYIPKCEMN 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV DF+P  +L    DGL+ YR IA    ++  + G+ + EIGYNQ  DV +I E 
Sbjct: 198 QLQPEVLDFEPAAALTDSGDGLAFYRAIATEAKKY--EIGILAFEIGYNQGPDVTKILEI 255

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +  F DY    RV++
Sbjct: 256 EGYQNIQLFYDYNNKHRVII 275


>gi|317491753|ref|ZP_07950188.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920187|gb|EFV41511.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 280

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  V G S   ++   ++ L   Q   L   + R  + E +  +LG R+F+++ 
Sbjct: 22  RDAEILLGFVAGKSRSSILAFGETELTPEQVQQLELLLARRERGEPVAYLLGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         +LDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LEVSPATLIPRPDTECLVEKALAL-LPVA----ACSVLDLGTGTGAIALALASERPDCQF 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           VGVD S  A  +A  NA    ++     +   W+  V    F +I SNPPYI+       
Sbjct: 137 VGVDYSADATALASRNASRLNIT-NVTFVTGSWYDPVGAQQFALIASNPPYIDESDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+  R I +    HL + G   +E G+ Q   V ++ ++R 
Sbjct: 196 QGDVR-FEPASALVAPENGLADLRHIVEYAPDHLIEGGWLIMEHGWQQGEAVRQLLKARG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   KDYG NDR+ L
Sbjct: 255 FTDVVTEKDYGNNDRITL 272


>gi|296159489|ref|ZP_06842313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. Ch1-1]
 gi|295890197|gb|EFG69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. Ch1-1]
          Length = 281

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D  L     +R+    A  R    E + +++G R+F+ +
Sbjct: 20  EARILLTHVLGWRPTQLITRSDEPLQAEVVERYRALEA--RRAAGEPVAQLVGAREFFGL 77

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  +
Sbjct: 78  NFEVTPHVLIPRPETELLVETALAA----LENLARPRVLDLGTGTGAIAVAIASMRPDAQ 133

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S +AL +A  NA     ++R        QSDW+ S++    F VIVSNPPYI S
Sbjct: 134 VWALDRSAEALAVATRNAARLLDAKRPGGAVVLTQSDWYGSLDAALRFHVIVSNPPYIAS 193

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  R I  G    L   G+  +E GY+Q   V  
Sbjct: 194 GDPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVVWIEHGYDQAEAVRE 252

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  ++    V + +D  G +R+
Sbjct: 253 LLTAQGFMQVRSERDLAGIERI 274


>gi|254497856|ref|ZP_05110622.1| protein methyltransferase HemK [Legionella drancourtii LLAP12]
 gi|254352934|gb|EET11703.1| protein methyltransferase HemK [Legionella drancourtii LLAP12]
          Length = 261

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 7/251 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC +   +   +   P+ +L D Q     N +    +   I  I G R+F+++ L ++ 
Sbjct: 12  LLCYLLKKNRAYLFAHPEELLSDEQFATYQNLLAERAQGVPIAYITGEREFWSLNLKVNR 71

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PR ETELLV+ AL     ++       IL+LGTG+GA+ LAL KE P +  V  D+
Sbjct: 72  HTLIPRHETELLVELALE----KLPNSPNTCILELGTGSGAIALALAKERPQWHIVACDV 127

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +AL IAK NA+ + +S       SDW+S++ +  +  I+SNPPYI          ++R
Sbjct: 128 SEEALLIAKENALHHQLS-NVTFYHSDWYSNIPQQQYHAIISNPPYIAEQDPHLNEGDLR 186

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L  G  GL+    I      +L  +G+  +E GY+QK++V  I        V 
Sbjct: 187 -FEPYNALASGQQGLADLLLIIKQGYDYLLPNGVLLLEHGYDQKLNVQAILIELGYKNVQ 245

Query: 249 AFKDYGGNDRV 259
           ++KD  G+DRV
Sbjct: 246 SWKDIQGHDRV 256


>gi|325273243|ref|ZP_08139523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
 gi|324101620|gb|EGB99186.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
          Length = 276

 Score =  121 bits (304), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 8/214 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG + F+ + L ++  T  PRP+TELLV++AL      ++     R+LDLGTGT
Sbjct: 65  EPVAYILGQQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPAAPARVLDLGTGT 119

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167
           GA+ LAL  E P ++   VD   +A  +A+ N     +S     L S WF S+ G  FD+
Sbjct: 120 GAIALALASERPAWQVTAVDRVAEAAALAERNRQRLSLSNTQVRL-SHWFDSLAGERFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI +     +  +VR F+P  +L  G DGL   R I      HL   G   +E 
Sbjct: 179 IVSNPPYIAAADPHLVAGDVR-FEPSSALVAGPDGLDDLRVIVTQAPGHLVPGGWLLLEH 237

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY+Q   V  +   +    V +  D GG++R+ L
Sbjct: 238 GYDQAAAVRALLVEQGFNEVASRTDLGGHERISL 271


>gi|89256989|ref|YP_514351.1| modification methylase [Francisella tularensis subsp. holarctica
           LVS]
 gi|156503188|ref|YP_001429254.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|167009370|ref|ZP_02274301.1| modification methylase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368244|ref|ZP_04984264.1| modification methylase hemK [Francisella tularensis subsp.
           holarctica 257]
 gi|290954491|ref|ZP_06559112.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312096|ref|ZP_06802909.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89144820|emb|CAJ80159.1| modification methylase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254054|gb|EBA53148.1| modification methylase hemK [Francisella tularensis subsp.
           holarctica 257]
 gi|156253791|gb|ABU62297.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 284

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 CNFNDIKIVKDLNNNDR 275


>gi|167031790|ref|YP_001667021.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida GB-1]
 gi|166858278|gb|ABY96685.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas putida GB-1]
          Length = 276

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 14/217 (6%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ILG + F+ + L ++  T  PRP+TELLV++AL      ++     ++LDLGTGT
Sbjct: 65  EPVAYILGQQGFWKIDLEVAPHTLIPRPDTELLVETAL-----ELQPAAPAKVLDLGTGT 119

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG-L 164
           GA+ LAL  + P ++   VD   +A  +A+ N    G     D  Q   S WF S+ G  
Sbjct: 120 GAIALALASDRPAWQVTAVDRVEEAAALAERNRQRLG----LDNAQVRVSHWFDSLAGER 175

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+IVSNPPYI +     +  +VR F+P  +L  G DGL   R IA     HL   G   
Sbjct: 176 FDLIVSNPPYIAAEDPHLVAGDVR-FEPSSALVAGADGLDDLRVIAAQAPAHLLPGGWLL 234

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +E GY+Q   V  +   +    V +  D GG++R+ L
Sbjct: 235 LEHGYDQAAAVRALLAEQGFVEVASRTDLGGHERITL 271


>gi|121593272|ref|YP_985168.1| HemK family modification methylase [Acidovorax sp. JS42]
 gi|120605352|gb|ABM41092.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax
           sp. JS42]
          Length = 280

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 9/216 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  K E +  +LG ++F+ + L++ +   +PRP+TE LV    A++L  +  R   R+ 
Sbjct: 62  ARRAKGEPVAYLLGRKEFWGLPLSVDARVLDPRPDTETLV----AWALEVLATRAAPRVA 117

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL  E P  + + VD S  AL +A++NA   G+  RF  +Q +W   V+
Sbjct: 118 DLGTGSGAIALALQHERPDAQVLAVDASAGALAVARANAGQLGLPVRF--IQGNWLHGVD 175

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD IVSNPPYI +       L     +P  +L  G DGL   RTI       L   G 
Sbjct: 176 GPFDAIVSNPPYIPAQDPHLAALT---HEPLSALASGADGLEDIRTIVAQAPARLAPGGW 232

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +E G++Q   V  +        V +  D  G  R
Sbjct: 233 LLLEHGWDQAEAVQALLRDAGFDQVQSRHDLAGIAR 268


>gi|222109994|ref|YP_002552258.1| type 12 methyltransferase [Acidovorax ebreus TPSY]
 gi|221729438|gb|ACM32258.1| Methyltransferase type 12 [Acidovorax ebreus TPSY]
          Length = 280

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 9/216 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  K E +  +LG ++F+ + L++ +   +PRP+TE LV    A++L  +  R   R+ 
Sbjct: 62  ARRAKGEPVAYLLGRKEFWGLPLSVDARVLDPRPDTETLV----AWALEVLATRAAPRVA 117

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL  E P  + + VD S  AL +A++NA   G+  RF  +Q +W   V+
Sbjct: 118 DLGTGSGAIALALQHERPDAQVLAVDASADALAVARANAGQLGLPVRF--IQGNWLHGVD 175

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD IVSNPPYI +       L     +P  +L  G DGL   RTI       L   G 
Sbjct: 176 GSFDAIVSNPPYIAAQDPHLAALT---HEPLSALASGADGLEDIRTIVAQAPARLAPGGW 232

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +E G++Q   V  +        V +  D  G  R
Sbjct: 233 LLLEHGWDQAEAVQALLRDAGFDQVQSRHDLAGIAR 268


>gi|148981992|ref|ZP_01816580.1| HemK protein [Vibrionales bacterium SWAT-3]
 gi|145960680|gb|EDK26024.1| HemK protein [Vibrionales bacterium SWAT-3]
          Length = 290

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 23/268 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P++ L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPETHLTSEQESEFQALLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173
           G+D+  +A  +A  NA    +TN        L   WF  + GL        F +IVSNPP
Sbjct: 144 GIDLRPEAQALATENAKRLNITNAT-----FLHGSWFDPLSGLASDGDEVKFSLIVSNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YIE         +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q +
Sbjct: 199 YIEKDDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARGFLEDEGWLAFEHGYDQGL 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            V  I ++     V   KDY GNDRV L
Sbjct: 258 AVREIMQTLGYLDVVTEKDYCGNDRVTL 285


>gi|331266423|ref|YP_004326053.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5]
 gi|326683095|emb|CBZ00713.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5]
          Length = 278

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 131/262 (50%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      + + +  F+     +   H+    I+G  DF+ ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVTEEENQFVEEIYQQLAAHKPAQYIIGQADFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPET+ LV+  LA +      ++ ++ILD+GTG+GA+ L L K  P +  
Sbjct: 82  LKVDERVLIPRPETKELVELILAEN-----AKESLKILDIGTGSGAIALGLAKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  NA    ++  F   +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQDALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F     
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPDLFRKNLP 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           E R    V   KD  G DR+++
Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272


>gi|261400801|ref|ZP_05986926.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC
           23970]
 gi|269209402|gb|EEZ75857.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC
           23970]
          Length = 273

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+G V + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGTVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|85059853|ref|YP_455555.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Sodalis glossinidius str. 'morsitans']
 gi|84780373|dbj|BAE75150.1| putative protoporphyrinogen oxidase [Sodalis glossinidius str.
           'morsitans']
          Length = 282

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 10/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L + TG++  +++   ++ L D Q   L   + R  + E +  + G R+F++
Sbjct: 22  ARSDAEILLAQQTGVARTRLLAFGETPLTDAQHATLEALLARRERGEPVAYLTGEREFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + L +S+DT  PRP+TE LV  AL    P R E      +LDLGTG+GA+ LAL  E P 
Sbjct: 82  LPLRVSADTLIPRPDTECLVQRALDLLSPGRAE------VLDLGTGSGAIALALASERPE 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
           ++  G+D    A+ +A++NA   G+       + DWF  ++   + +IVSNPPYI++   
Sbjct: 136 WRITGIDRLPGAVALARANAARLGL-RNVQFHEGDWFKPLQAQRYRLIVSNPPYIKADDP 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +VR F+PR +L  G DGL     I  G   HL   G   +E G+ Q   V  +  
Sbjct: 195 HLMQGDVR-FEPRSALVAGEDGLQDLAAICRGAGAHLEPGGWLVLEHGWCQGAAVRGLLA 253

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                 +   +DYG N+RV
Sbjct: 254 DTGFGQIATLRDYGDNERV 272


>gi|325143479|gb|EGC65800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240013]
 gi|325206969|gb|ADZ02422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M04-240196]
          Length = 273

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+I SNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIASNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|16760668|ref|NP_456285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|29141573|ref|NP_804915.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|213051785|ref|ZP_03344663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213419807|ref|ZP_03352873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
 gi|213426496|ref|ZP_03359246.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213581390|ref|ZP_03363216.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213859592|ref|ZP_03385296.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|289827377|ref|ZP_06545997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25513362|pir||AI0719 HemK protein, probable protoporphyrinogen oxidase hemK [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502964|emb|CAD02130.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29137200|gb|AAO68764.1| HemK protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
          Length = 277

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/256 (36%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRRSG 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|82544334|ref|YP_408281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii Sb227]
 gi|157156593|ref|YP_001462465.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli E24377A]
 gi|300921822|ref|ZP_07137979.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           182-1]
 gi|301327072|ref|ZP_07220354.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
 gi|81245745|gb|ABB66453.1| possible protoporphyrinogen oxidase [Shigella boydii Sb227]
 gi|157078623|gb|ABV18331.1| protein methyltransferase HemK [Escherichia coli E24377A]
 gi|300421748|gb|EFK05059.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           182-1]
 gi|300846325|gb|EFK74085.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
 gi|332094776|gb|EGI99820.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii 3594-74]
          Length = 277

 Score =  121 bits (304), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|161869127|ref|YP_001598293.1| HemK protein [Neisseria meningitidis 053442]
 gi|161594680|gb|ABX72340.1| HemK protein [Neisseria meningitidis 053442]
          Length = 234

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 113/219 (51%), Gaps = 12/219 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ DLG
Sbjct: 17  LNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLG 70

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VE 162
           TG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +    E
Sbjct: 71  TGSGAVAVTVALERPDAFVRASDISPPALETARENAADLGA--RVEFAHGSWFDTDMPSE 128

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + G 
Sbjct: 129 GKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGF 187

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             +E G++Q   V  +        V    D  G DRV L
Sbjct: 188 LLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 226


>gi|193077722|gb|ABO12580.2| methyl transferase [Acinetobacter baumannii ATCC 17978]
          Length = 273

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 12/215 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+L+++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPNWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GY+Q   V  IF       +   +DYG NDRV L
Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIKTIQDYGQNDRVTL 267


>gi|308390164|gb|ADO32484.1| hemk protein [Neisseria meningitidis alpha710]
          Length = 273

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|296134390|ref|YP_003641637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermincola sp. JR]
 gi|296032968|gb|ADG83736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermincola potens JR]
          Length = 283

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 133/260 (51%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G+   ++ ++ ++VL D Q     N + R    E +  + G ++F ++  
Sbjct: 27  DAEVLLSYLLGMDRAKLYLNREAVLSDEQIGRFRNLVERRGLREPVAYLTGTKEFMSLDF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++S    PRP+TE+LV+  LA   P +       ++D+GTG+GA+ ++     P  +  
Sbjct: 87  KVNSSVLIPRPDTEILVEEILAIK-PAL-------MVDVGTGSGAIAISAAYYLPETRVF 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
             DIS +AL +A+ NA+  GVS+R + +Q +  +          D+I +N PYI   ++ 
Sbjct: 139 ATDISPEALNLARENAINLGVSDRIEFVQGNLLTPFINRPNFRVDLIAANLPYIPGEVLK 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++LDGG +GL  Y+++   V R L   G   +EIGYNQ   +      
Sbjct: 199 ELPDEVRKYEPALALDGGCEGLDLYKSLIGQVPRVLKSGGRLLMEIGYNQSGLLADFLTQ 258

Query: 242 RKLFL-VNAFKDYGGNDRVL 260
              F  +   KD  G DRV+
Sbjct: 259 IPCFSGIRVIKDLSGRDRVV 278


>gi|290508965|ref|ZP_06548336.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella sp. 1_1_55]
 gi|289778359|gb|EFD86356.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella sp. 1_1_55]
          Length = 282

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         ILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLPAAP----CHILDLGTGTGAIALALASERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++      
Sbjct: 137 TAVDVMPDAVALALRNAAHLDIAN-VTIRQSDWFSALAGQRFAMIVSNPPYIDAADPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFREAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+R+ L
Sbjct: 255 YLDVATCRDYGDNERLTL 272


>gi|331662615|ref|ZP_08363538.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA143]
 gi|331061037|gb|EGI33001.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA143]
          Length = 277

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNA-QNLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|56707339|ref|YP_169235.1| hemK protein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110669809|ref|YP_666366.1| hemK protein [Francisella tularensis subsp. tularensis FSC198]
 gi|134301376|ref|YP_001121344.1| HemK family methyltransferase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224456402|ref|ZP_03664875.1| HemK family methyltransferase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370016|ref|ZP_04986023.1| modification methylase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874174|ref|ZP_05246884.1| methyltransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603831|emb|CAG44802.1| hemK protein homolog [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320142|emb|CAL08185.1| hemK protein homolog [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049153|gb|ABO46224.1| methyltransferase, hemK family [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568261|gb|EDN33915.1| modification methylase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840173|gb|EET18609.1| methyltransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158464|gb|ADA77855.1| methyltransferase, hemK family protein [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 284

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 136/257 (52%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +
Sbjct: 26  HDLQMIICDVLGVDKTYLYINLDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQK 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L ++ DT  PR +TE +V    A  L  I+ +D  ++ILDLGTGTGA+ LAL  E    +
Sbjct: 86  LYVTKDTLIPRADTETVV----ATVLDDIQNKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            V VD+  ++L++AK NA  N ++  +F  +QS W+++++   FD+IVSNPPYI+    +
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNITNVKF--IQSSWYTNLDTDKFDIIVSNPPYIDLADTN 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F  
Sbjct: 200 -IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQ 258

Query: 242 RKLFLVNAFKDYGGNDR 258
                +   KD   NDR
Sbjct: 259 CNFTDIKIVKDLNNNDR 275


>gi|117919222|ref|YP_868414.1| HemK family modification methylase [Shewanella sp. ANA-3]
 gi|117611554|gb|ABK47008.1| modification methylase, HemK family [Shewanella sp. ANA-3]
          Length = 286

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 121/234 (51%), Gaps = 8/234 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + R  +   +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 48  PEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L         ++LDLGTGTGA+ LAL  E   ++   VD    A+ +AK+N  TN 
Sbjct: 108 LNLPL-----ESNAKVLDLGTGTGAIALALASERATWQITAVDKVEDAVALAKANR-TNL 161

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             E+ + LQSDWFS+++   FD+IVSNPPYI+         +VR F+P+ +L    +G +
Sbjct: 162 KLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEHLHQGDVR-FEPQSALTAADEGFA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
               IA     +L  +G   +E G+ Q V +           V   +D+G NDR
Sbjct: 221 DLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTELGYQNVATVRDFGSNDR 274


>gi|323977217|gb|EGB72304.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509]
          Length = 277

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIHAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|123967879|ref|YP_001008737.1| putative protein methyltransferase [Prochlorococcus marinus str.
           AS9601]
 gi|123197989|gb|ABM69630.1| putative protein methyltransferase [Prochlorococcus marinus str.
           AS9601]
          Length = 289

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 116/220 (52%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++RS   + +  +  WRD   ++L +++    PRPETEL+VD  + F++ R  K + +  
Sbjct: 69  LIRSCPIQYLCGLTYWRD---LKLKVTNKVLIPRPETELIVD--IVFNIFR-RKSEKLFF 122

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            +LGTG+GA+ +AL    PF KGV  D+   ALEIA  N + +           +W+S +
Sbjct: 123 AELGTGSGAISIALALAYPFSKGVATDVDQDALEIATKNYINSSKQSNLKFYCGNWWSPL 182

Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           E   G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL H R I       L 
Sbjct: 183 ENFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGEDGLKHIREIIQKAPIFLK 242

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + G   +E  ++Q   V ++F   K   +   KD  G  R
Sbjct: 243 EKGWLILENHFDQGEKVKQLFIKNKFTSIEIVKDLSGIGR 282


>gi|91069911|gb|ABE10840.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone ASNC2150]
          Length = 289

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++RS   + +  I  WRD   ++L +++    PRPETEL+VD  + F++ R  K + +  
Sbjct: 69  LIRSCPIQYLCGITYWRD---LKLKVTNKVLIPRPETELIVD--IVFNVFR-RKSEKLFF 122

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            +LGTG+GA+ +AL    PF +GV  DI   ALEIA  N + +           +W+S +
Sbjct: 123 AELGTGSGAISIALALSYPFSEGVATDIDQDALEIANKNYINSSKQSNLKFYCGNWWSPL 182

Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           E   G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL H R I       L 
Sbjct: 183 ENFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGEDGLKHIREIIQKAPIFLK 242

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + G   +E  ++Q   V ++F   K   +   KD  G  R
Sbjct: 243 EKGWLILENHFDQGEKVKQLFIKNKFTSIEIVKDLSGIGR 282


>gi|269958474|ref|YP_003328261.1| putative HemK family modification methylase [Anaplasma centrale
           str. Israel]
 gi|269848303|gb|ACZ48947.1| putative HemK family modification methylase [Anaplasma centrale
           str. Israel]
          Length = 282

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 121/228 (53%), Gaps = 8/228 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+     +  G+S+  ++VD D  ++  +  RFF    + R L  E +  ILG R+F+ +
Sbjct: 25  DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++SD  +PR +TE +V SA+   + + + R++  I DLGTGTG + +ALL       
Sbjct: 83  DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRHAT 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  L
Sbjct: 140 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             EVR  +P  +LDGG+ G+  Y  I   + + L   G   +EIG +Q
Sbjct: 199 QREVRQHEPLRALDGGVRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 246


>gi|16129175|ref|NP_415730.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. MG1655]
 gi|24112611|ref|NP_707121.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 301]
 gi|30062736|ref|NP_836907.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 2457T]
 gi|89108057|ref|AP_001837.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. W3110]
 gi|157160717|ref|YP_001458035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli HS]
 gi|170020421|ref|YP_001725375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ATCC 8739]
 gi|170080840|ref|YP_001730160.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187731012|ref|YP_001879995.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|188492205|ref|ZP_02999475.1| protein methyltransferase HemK [Escherichia coli 53638]
 gi|218553766|ref|YP_002386679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|238900443|ref|YP_002926239.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli BW2952]
 gi|256018538|ref|ZP_05432403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|256023111|ref|ZP_05436976.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|260854873|ref|YP_003228764.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|260867617|ref|YP_003234019.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300816903|ref|ZP_07097123.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           107-1]
 gi|300951679|ref|ZP_07165503.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           116-1]
 gi|300955612|ref|ZP_07167969.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           175-1]
 gi|301029485|ref|ZP_07192567.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           196-1]
 gi|312971399|ref|ZP_07785574.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1827-70]
 gi|331652250|ref|ZP_08353269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M718]
 gi|331667596|ref|ZP_08368460.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA271]
 gi|332279598|ref|ZP_08392011.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
 gi|81170789|sp|P0ACC1|HEMK_ECOLI RecName: Full=Protein methyltransferase hemK; AltName:
           Full=M.EcoKHemKP; AltName: Full=Protein-(glutamine-N(5))
           MTase hemK; AltName: Full=Protein-glutamine
           N-methyltransferase hemK
 gi|81170790|sp|P0ACC2|HEMK_SHIFL RecName: Full=Protein methyltransferase hemK; AltName:
           Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
           Full=Protein-glutamine N-methyltransferase hemK
 gi|50513699|pdb|1T43|A Chain A, Crystal Structure Analysis Of E.Coli Protein
           (N5)-Glutamine Methyltransferase (Hemk)
 gi|968931|gb|AAC43438.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|1651602|dbj|BAA36070.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K12 substr. W3110]
 gi|1787463|gb|AAC74296.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. MG1655]
 gi|18376673|dbj|BAB84109.1| protein-(glutamine-N5) methyl transferase [Escherichia coli]
 gi|24051516|gb|AAN42828.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 301]
 gi|30040984|gb|AAP16714.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str.
           2457T]
 gi|157066397|gb|ABV05652.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli HS]
 gi|169755349|gb|ACA78048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli ATCC 8739]
 gi|169888675|gb|ACB02382.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187428004|gb|ACD07278.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii CDC 3083-94]
 gi|188487404|gb|EDU62507.1| protein methyltransferase HemK [Escherichia coli 53638]
 gi|218360534|emb|CAQ98092.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli IAI1]
 gi|238861844|gb|ACR63842.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli BW2952]
 gi|257753522|dbj|BAI25024.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|257763973|dbj|BAI35468.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|260449653|gb|ACX40075.1| modification methylase, HemK family [Escherichia coli DH1]
 gi|281600636|gb|ADA73620.1| Protein methyltransferase hemK [Shigella flexneri 2002017]
 gi|299877628|gb|EFI85839.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           196-1]
 gi|300317505|gb|EFJ67289.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           175-1]
 gi|300449125|gb|EFK12745.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           116-1]
 gi|300530677|gb|EFK51739.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           107-1]
 gi|310335996|gb|EFQ01196.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1827-70]
 gi|313649401|gb|EFS13832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2a str. 2457T]
 gi|315135848|dbj|BAJ43007.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli DH1]
 gi|320174902|gb|EFW50021.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae CDC 74-1112]
 gi|320185615|gb|EFW60377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri CDC 796-83]
 gi|323153189|gb|EFZ39451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli EPECa14]
 gi|323179273|gb|EFZ64843.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1180]
 gi|323942491|gb|EGB38659.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482]
 gi|323947505|gb|EGB43509.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120]
 gi|324117240|gb|EGC11147.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167]
 gi|331050528|gb|EGI22586.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M718]
 gi|331065181|gb|EGI37076.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA271]
 gi|332101950|gb|EGJ05296.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
 gi|332757865|gb|EGJ88192.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 4343-70]
 gi|332759447|gb|EGJ89755.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2747-71]
 gi|332760306|gb|EGJ90596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-671]
 gi|332767446|gb|EGJ97640.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2930-71]
 gi|333005051|gb|EGK24571.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri VA-6]
 gi|333005663|gb|EGK25181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-218]
 gi|333007545|gb|EGK27023.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-272]
 gi|333019222|gb|EGK38509.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-304]
 gi|333019925|gb|EGK39197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-227]
          Length = 277

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|195978152|ref|YP_002123396.1| methylase of polypeptide chain release factors [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974857|gb|ACG62383.1| methylase of polypeptide chain release factors [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 282

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 19/248 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L  +Q +   D  L   +R FL  +     +H S   I G   F ++ L + S    PRP
Sbjct: 41  LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           ETE LV+  L       ++ D  R  +LD+GTG+GA+ +AL K  P ++    DIS  AL
Sbjct: 94  ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            +A SNA+ + V   F+  +SD FS + G FD+IVSNPPYI     D +GL V   +P +
Sbjct: 147 SLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    +G + YR I +  S +L   G    EIGY Q   + R+   R     +   KD 
Sbjct: 205 ALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 265 LGKERMVV 272


>gi|293414489|ref|ZP_06657138.1| methyltransferase [Escherichia coli B185]
 gi|291434547|gb|EFF07520.1| methyltransferase [Escherichia coli B185]
          Length = 277

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|225868514|ref|YP_002744462.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225701790|emb|CAW99202.1| putative methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 282

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 126/248 (50%), Gaps = 19/248 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L  +Q +   D  L   +R FL  +     +H S   I G   F ++ L + S    PRP
Sbjct: 41  LHQNQEVTSEDQAL--LERIFLALS-----QHVSPQYITGRAYFRDLVLAVDSRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           ETE LV+  L       ++ D  R  +LD+GTG+GA+ +AL K  P ++    DIS  AL
Sbjct: 94  ETEELVELIL-------KENDATRKSVLDIGTGSGAIAIALKKARPNWQVTASDISADAL 146

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            +A SNA+ + V   F+  +SD FS + G FD+IVSNPPYI     D +GL V   +P +
Sbjct: 147 SLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLNVYQSEPHL 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    +G + YR I +  S +L   G    EIGY Q   + R+   R     +   KD 
Sbjct: 205 ALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQKRIRVLKDM 264

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 265 LGKERMVV 272


>gi|254226891|ref|ZP_04920459.1| hemK protein [Vibrio cholerae V51]
 gi|125620573|gb|EAZ48939.1| hemK protein [Vibrio cholerae V51]
          Length = 286

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|88192213|pdb|2B3T|A Chain A, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 276

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|15801441|ref|NP_287458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 EDL933]
 gi|15830971|ref|NP_309744.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. Sakai]
 gi|168750772|ref|ZP_02775794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758137|ref|ZP_02783144.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764381|ref|ZP_02789388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4501]
 gi|168771101|ref|ZP_02796108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4486]
 gi|168776895|ref|ZP_02801902.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4196]
 gi|168782568|ref|ZP_02807575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787716|ref|ZP_02812723.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC869]
 gi|168801525|ref|ZP_02826532.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC508]
 gi|195939100|ref|ZP_03084482.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC4024]
 gi|208806533|ref|ZP_03248870.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815524|ref|ZP_03256703.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822687|ref|ZP_03263006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396125|ref|YP_002270146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4115]
 gi|217328046|ref|ZP_03444128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. TW14588]
 gi|254792682|ref|YP_003077519.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|261224944|ref|ZP_05939225.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257199|ref|ZP_05949732.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282237|ref|YP_003499055.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O55:H7 str. CB9615]
 gi|12514925|gb|AAG56070.1|AE005338_10 possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13361182|dbj|BAB35140.1| possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187767812|gb|EDU31656.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4196]
 gi|188015064|gb|EDU53186.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4113]
 gi|189000050|gb|EDU69036.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354975|gb|EDU73394.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4401]
 gi|189360088|gb|EDU78507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365629|gb|EDU84045.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372472|gb|EDU90888.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC869]
 gi|189376321|gb|EDU94737.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC508]
 gi|208726334|gb|EDZ75935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4206]
 gi|208732172|gb|EDZ80860.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738172|gb|EDZ85855.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157525|gb|ACI34958.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4115]
 gi|209772518|gb|ACI84571.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772520|gb|ACI84572.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772522|gb|ACI84573.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772524|gb|ACI84574.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772526|gb|ACI84575.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|217318473|gb|EEC26899.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. TW14588]
 gi|254592082|gb|ACT71443.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290762110|gb|ADD56071.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O55:H7 str. CB9615]
 gi|320188004|gb|EFW62671.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC1212]
 gi|320643226|gb|EFX12427.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320648163|gb|EFX16839.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320653997|gb|EFX22071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659476|gb|EFX27045.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664613|gb|EFX31764.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326342760|gb|EGD66530.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. 1044]
 gi|326346387|gb|EGD70124.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. 1125]
          Length = 277

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL +E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|219849414|ref|YP_002463847.1| modification methylase, HemK family [Chloroflexus aggregans DSM
           9485]
 gi|219543673|gb|ACL25411.1| modification methylase, HemK family [Chloroflexus aggregans DSM
           9485]
          Length = 293

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 6/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S  +V+ + + VL   Q+      + R    E +  ++G   F+ + L
Sbjct: 34  DAELLLAHILGWSRARVVAEREVVLTPAQQEAFGALVERRAAREPVAYLIGHWPFFGLDL 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETELLV+  LA +  R      + I D+G G+GA+ +AL    P     
Sbjct: 94  VVDRRVLIPRPETELLVE--LALTEARRYADTQITIADIGVGSGAIAIALAIHVPHATVY 151

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD S  AL +A  N     +S+R   L+ D  + V G  D+IVSNPPY     VD    
Sbjct: 152 GVDRSADALAVAARNVARYNLSDRVVLLEGDLLTPVPGPVDLIVSNPPYTILAEVDE--- 208

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244
            V  ++P ++LDGG DGL  YR +      +L   G   +EIG  Q   V  +  ++   
Sbjct: 209 SVYRYEPHLALDGGPDGLDCYRRLIAAAPAYLKPGGAILLEIGAWQAEAVAHLLNQALPH 268

Query: 245 FLVNAFKDYGGNDRVL 260
             V   +D  G DRV+
Sbjct: 269 AEVGVQRDLAGRDRVV 284


>gi|46581320|ref|YP_012128.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450742|gb|AAS97388.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234982|gb|ADP87836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris RCH1]
          Length = 295

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 10/259 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC    L    +++ PD ++++      +  + R    E +  I+G ++F+     ++ 
Sbjct: 37  ILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFAVNP 96

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRPETE L+++AL  SL    +    R +D GTG+G + + L  E     G+ +D+
Sbjct: 97  STLIPRPETEHLIETALE-SL----RSGPARFVDAGTGSGCIAVTLCAERADLSGLALDM 151

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL  A  NA  +GV++R   ++ D+ +S+   G  D+  SNPPYI       L  EV
Sbjct: 152 SAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISEAEYTGLSREV 211

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245
           RDF+PR +L  G  GL H   I    +R L   G+  +E G  Q  D+  +F        
Sbjct: 212 RDFEPRSALVPGDTGLEHAAAIIAEATRVLRPHGILLMEFGCMQGADMASLFTPYSTLWE 271

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           +V   +D  G DR  +F R
Sbjct: 272 MVEVRRDLAGLDR-FIFAR 289


>gi|171779353|ref|ZP_02920317.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281970|gb|EDT47401.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 276

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 102/184 (55%), Gaps = 7/184 (3%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H S   I G   F ++ L +      PRPETE LVD  L     +   +  +R+LD+GTG
Sbjct: 65  HRSPQYITGKAYFRDLELAVDERVLIPRPETEELVDLVL-----KENSKADLRVLDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ ++L    P ++    DIS  AL++A+ N+  N VS   D ++SD F  + G FDV
Sbjct: 120 SGAIAISLKSARPDWQVTASDISQGALQLAEENSKLNQVS--LDFVESDVFGQITGTFDV 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I+SNPPYI     D +G+ V   +P ++L    DG + YR I +G   HL+++G    EI
Sbjct: 178 IISNPPYIAYGDKDEVGMNVLASEPHLALFADEDGFAIYRQIIEGAGEHLSENGKLYFEI 237

Query: 228 GYNQ 231
           GY Q
Sbjct: 238 GYKQ 241


>gi|300906881|ref|ZP_07124555.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
 gi|301305582|ref|ZP_07211673.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           124-1]
 gi|300401314|gb|EFJ84852.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
 gi|300839171|gb|EFK66931.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           124-1]
 gi|315254828|gb|EFU34796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli MS 85-1]
          Length = 277

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL +E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|226946180|ref|YP_002801253.1| Modification methylase HemK [Azotobacter vinelandii DJ]
 gi|226721107|gb|ACO80278.1| Modification methylase HemK [Azotobacter vinelandii DJ]
          Length = 276

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G  +  +   P+  + +         + R    E +  ILG + F+++ L
Sbjct: 22  DAEWLLAAALGKPASYLRAWPEREVPEAPAVRFAADLARRRAGEPVAYILGRQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA  LP         +LDLGTG+GA+ LAL  E P ++  
Sbjct: 82  EVAPATLIPRPDTELLVETALAL-LPATP----AEVLDLGTGSGAIALALAAERPAWRLT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
           GVD   +A+ +A+ N    G+      L SDWFS+++G  F +I  NPPYI +       
Sbjct: 137 GVDRVMEAVALAERNRRRLGLGN-ATFLPSDWFSALDGRRFALIAGNPPYIAADDPHLAL 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R I      HL   G   +E G+ Q   V  +  +R  
Sbjct: 196 GDVR-FEPASALVAGADGLDDIRRIVVEAPGHLQAGGWLLLEHGFEQAGAVRGLLTTRGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V++ +D GG++R+ L
Sbjct: 255 VEVHSRRDLGGHERISL 271


>gi|331646530|ref|ZP_08347633.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M605]
 gi|281178398|dbj|BAI54728.1| putative methyltransferase [Escherichia coli SE15]
 gi|330911077|gb|EGH39587.1| methylase of polypeptide chain release factor [Escherichia coli
           AA86]
 gi|331045282|gb|EGI17409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M605]
          Length = 277

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|332202883|gb|EGJ16951.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA47901]
          Length = 279

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ N   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVENIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273


>gi|322385290|ref|ZP_08058935.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
           ATCC 51100]
 gi|321270549|gb|EFX53464.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
           ATCC 51100]
          Length = 276

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +  +      + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSENPEK-----SLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA + G+   F  +QSD   ++ G F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSEDALALAAENAQSCGLDLAF--VQSDCMEAISGTF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271


>gi|149003881|ref|ZP_01828704.1| HemK protein [Streptococcus pneumoniae SP14-BS69]
 gi|237650078|ref|ZP_04524330.1| HemK protein [Streptococcus pneumoniae CCRI 1974]
 gi|237822153|ref|ZP_04597998.1| HemK protein [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758111|gb|EDK65115.1| HemK protein [Streptococcus pneumoniae SP14-BS69]
          Length = 279

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLATHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     DIS +AL++A+ NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPAWSVTAADISQEALDLARENAKNQNL- 159

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+  + +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|307704778|ref|ZP_07641674.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597]
 gi|307621687|gb|EFO00728.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597]
          Length = 278

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    I+G  DFY ++L +      PRPETE LV+  LA + P       + +LD+GTG
Sbjct: 65  HKPAQYIIGQADFYGMQLKVDERVLIPRPETEELVELILAEN-PETN----LSVLDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ LAL K  P +     DIS  AL++A  NA    +  +    +SD F+ +   +D+
Sbjct: 120 SGAIALALAKNRPDWSVKAADISQDALDVASENAKNQNL--QIFLKKSDCFTEISEKYDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       +GL V   +P ++L    DGL+ YR IA+    +L   G   +EI
Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFAAEDGLAIYRRIAEDAKDYLKDGGKIYLEI 237

Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
           GY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 238 GYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 272


>gi|193213806|ref|YP_001995005.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroherpeton thalassium ATCC 35110]
 gi|193087283|gb|ACF12558.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroherpeton thalassium ATCC 35110]
          Length = 294

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L     L    + +  D  + +++R        R L+ E +  I+G +DF+ + L
Sbjct: 31  NAELLLAHTLNLKRMDLYLKFDMPVTEQERQTFRELCKRRLEGEPVQYIIGNQDFFGLTL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKG 124
            + S    PRPETELLV+ AL  SL +++  D  ++ILD+GTG+G + LA   +    + 
Sbjct: 91  DVDSRVLIPRPETELLVEEALN-SLSQLDFGDEKIKILDIGTGSGCIALAFASQLSNAEI 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           + VD+S +AL +AK N+  N +    RF   D L + ++  V G + +I+SNPPYI    
Sbjct: 150 LAVDVSSEALALAKQNSEKNKLKSEVRFLNIDMLSAHFYDEVPGSYHLIISNPPYIPIAE 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L +EVR+F+P I+L     G   Y  IA   +R L  +GL   E+  +    V  I 
Sbjct: 210 RDSLQVEVRNFEPAIALFVQ-QGFEFYEKIAQEAARLLKPNGLLCFELHADGATKVNIIL 268

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
           +      +   +DY G  R+
Sbjct: 269 KKNGFEQIRFVQDYAGFSRI 288


>gi|225856676|ref|YP_002738187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae P1031]
 gi|225724378|gb|ACO20230.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae P1031]
          Length = 279

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273


>gi|161503113|ref|YP_001570225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160864460|gb|ABX21083.1| hypothetical protein SARI_01178 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 277

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L   Q+  L   + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTYIMAFGETPLAATQQQQLAELLRRRKQGEPIAHLTGIREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P    
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALASERPDCDV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALPGQQFDMIVSNPPYIDARDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +G++    I D   + L   G   +E G+ Q   V   F    
Sbjct: 196 EGDVR-FEPLSALVADENGMADITHIIDHARQVLTPGGWLLLEHGWQQGEAVRATFRRAD 254

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +DYGGN+RV
Sbjct: 255 YTDVETCRDYGGNERV 270


>gi|149192360|ref|ZP_01870563.1| HemK protein [Vibrio shilonii AK1]
 gi|148833799|gb|EDL50833.1| HemK protein [Vibrio shilonii AK1]
          Length = 284

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 127/258 (49%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+  L   +       + R +  E +  ILG R+F+++ L
Sbjct: 29  DAAVLLCHVLEKPRSYLLTWPEKALTSNEAEQFEALLNRRIAGEPVAYILGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ AL  +L  +   D   ILDLGTGTGA+ LAL  E      +
Sbjct: 89  NVAPSTLIPRPDTERLVELALDKAL--VNDGD---ILDLGTGTGAIALALASELKTRSVM 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
           GVD   +A+E+A+SNA    ++      Q  WF  V+ +  F VIVSNPPYI+       
Sbjct: 144 GVDFQTEAVELARSNATKLNIT-NCQFAQGSWFEPVDLVHKFSVIVSNPPYIDENDPHLS 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +GL+   TI      HL + G    E G+ Q   V  I  +  
Sbjct: 203 QGDVR-FEPSTALVAENNGLADIETITAKAPTHLLEGGWLLFEHGFEQGQAVREILVNNG 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DY GNDRV L
Sbjct: 262 FCHVVTEQDYAGNDRVTL 279


>gi|330502034|ref|YP_004378903.1| HemK family modification methylase [Pseudomonas mendocina NK-01]
 gi|328916320|gb|AEB57151.1| HemK family modification methylase [Pseudomonas mendocina NK-01]
          Length = 277

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 128/240 (53%), Gaps = 14/240 (5%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  LD  Q+      + R    E +  ILG + F+++ L ++  T  PRP+TELLV++A
Sbjct: 42  PERDLDSAQQAQFNAFMQRRRSGEPVAYILGHQGFWSLDLEVAPHTLIPRPDTELLVETA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP       +  LDLGTGTGA+ LAL  E P ++  GVD   +A+ +A+ N     
Sbjct: 102 LDL-LPATP----LVALDLGTGTGAIALALASERPAWQVTGVDRIEEAVALAERNRQRLQ 156

Query: 146 V-SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGID 201
           + + RF  + S WFS++ G  + +I+SNPPYI +   D   LE  D  F+P  +L  G D
Sbjct: 157 LGNARF--VHSHWFSALPGQRYGLILSNPPYIRA---DDQHLEQGDVRFEPSSALVAGND 211

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GL   R I      HL   G   +E G++Q VDV R+        V + +D GG++R+ L
Sbjct: 212 GLDDIRAIIQAAPDHLLSGGWLLLEHGFDQAVDVRRLLADGGFVEVESRRDLGGHERISL 271


>gi|325199156|gb|ADY94612.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis G2136]
          Length = 273

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|54298227|ref|YP_124596.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris]
 gi|53752012|emb|CAH13438.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris]
          Length = 287

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC V   +   +   PD+++   Q       I +  +   I  I G R+F+++ L ++ 
Sbjct: 29  LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P +     D 
Sbjct: 89  NVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWHIDACDF 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +ALE+A+ NA T G++   +   S WF+++    +  IVSNPPYI          +VR
Sbjct: 145 SKEALELARYNAKTLGLN-NINFYHSCWFNNLPLKQYHAIVSNPPYIAENDPHLKQGDVR 203

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I        ++
Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262

Query: 249 AFKDYGGNDRV 259
            ++D  G+DRV
Sbjct: 263 CWQDLQGHDRV 273


>gi|313107326|ref|ZP_07793521.1| putative methyl transferase [Pseudomonas aeruginosa 39016]
 gi|310880023|gb|EFQ38617.1| putative methyl transferase [Pseudomonas aeruginosa 39016]
          Length = 276

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 129/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +   P+ ++         + I R    E +  ILG + F+++ L
Sbjct: 22  DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA             +LDLGTGTGA+ LAL  E P +   
Sbjct: 82  EVAPHTLIPRPDTELLVETALATL-----AAGTATVLDLGTGTGAIALALASERPLWTVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +       
Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   R I     RHL  +G   +E GY+Q   V  +  +R  
Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGARGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V+  +D GGN+R+ L
Sbjct: 255 AGVHTLRDLGGNERITL 271


>gi|52842547|ref|YP_096346.1| protein methyltransferase HemK [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629658|gb|AAU28399.1| protein methyltransferase HemK [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 287

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC V   +   +   PD+++   Q       I +  +   I  I G R+F+++ L ++ 
Sbjct: 29  LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P +     D 
Sbjct: 89  NVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWHIDACDF 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +ALE+A+ NA T G++   +   S WF+++    +  IVSNPPYI          +VR
Sbjct: 145 SKEALELARYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKHGDVR 203

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I        ++
Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262

Query: 249 AFKDYGGNDRV 259
            ++D  G+DRV
Sbjct: 263 CWQDLQGHDRV 273


>gi|15599859|ref|NP_253353.1| methyl transferase [Pseudomonas aeruginosa PAO1]
 gi|116052809|ref|YP_793126.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296391485|ref|ZP_06880960.1| putative methyl transferase [Pseudomonas aeruginosa PAb1]
 gi|9950919|gb|AAG08051.1|AE004880_7 probable methyl transferase [Pseudomonas aeruginosa PAO1]
 gi|115588030|gb|ABJ14045.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 276

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +   P+ ++         + I R    E +  ILG + F+++ L
Sbjct: 22  DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +   
Sbjct: 82  EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +       
Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   R I     RHL  +G   +E GY+Q   V  +  +R  
Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGARGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V+  +D GGN+R+ L
Sbjct: 255 AGVHTLRDLGGNERITL 271


>gi|293365353|ref|ZP_06612070.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307703895|ref|ZP_07640836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus oralis ATCC 35037]
 gi|291316803|gb|EFE57239.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307622730|gb|EFO01726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus oralis ATCC 35037]
          Length = 278

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 119/228 (52%), Gaps = 12/228 (5%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           F+     + + H+    I+G  +F+ ++L +      PRPETE LV+  L  +       
Sbjct: 54  FVEEIYQQLVAHKPAQYIIGHAEFFGMQLKVDERVLIPRPETEELVELILTEN-----PE 108

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           + +++LD+GTG+GA+ LAL K  P +     DIS +AL++A  NA    ++  F   +SD
Sbjct: 109 ENLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALQLASENAKNQNLNIFFK--KSD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR IA+    +
Sbjct: 167 CFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDY 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
           L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 227 LTDGGKIYLEIGYKQGQSVPALF--RKYLPEKRVRTLKDQFGQDRMVV 272


>gi|125717978|ref|YP_001035111.1| HemK protein [Streptococcus sanguinis SK36]
 gi|125497895|gb|ABN44561.1| HemK protein, putative [Streptococcus sanguinis SK36]
 gi|324991175|gb|EGC23109.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK353]
          Length = 276

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LVHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA +  ++  F  +QSD   S++G F
Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCELNLAF--VQSDCLDSIQGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           EIGY Q   +  + E       +   KD  G DR++
Sbjct: 236 EIGYKQGDGIRELLEKNFPQKRIRVLKDQFGKDRMV 271


>gi|193064883|ref|ZP_03045960.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E22]
 gi|194425825|ref|ZP_03058381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B171]
 gi|260843504|ref|YP_003221282.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|192927568|gb|EDV82185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E22]
 gi|194415880|gb|EDX32146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B171]
 gi|257758651|dbj|BAI30148.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|323162263|gb|EFZ48121.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E128010]
          Length = 277

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETHLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|323702618|ref|ZP_08114280.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532437|gb|EGB22314.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfotomaculum nigrificans DSM 574]
          Length = 285

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 6/230 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  +TGL    +I   D  L   Q       + R    E +  + G ++F  +  
Sbjct: 25  DSQVLLSHITGLDRTGLITRGDQPLTPAQLQQYEKLLERRAGGEPVAYLTGHKEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PRP+TEL+V+ A+  SL R      +  +D+GTG+GA+ + L    P  +  
Sbjct: 85  IVSPAVLIPRPDTELMVERAV--SLLRQSGARPLPAVDVGTGSGAIAVTLAHLVPGLQVY 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVD 181
            +DIS  AL +A+ NA  +GV++R    Q +    +    +G   VI +N PYI S  + 
Sbjct: 143 AIDISPDALAVARQNAARHGVADRVKFCQGNLLEPIPADLQGKVSVITANLPYIPSGDIS 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            L  +V+DF+PR++LDGG DGL+ YR +     R L+  G   +EIG  Q
Sbjct: 203 GLMTDVKDFEPRLALDGGPDGLALYRKLIPRAHRLLHPGGHLLMEIGPGQ 252


>gi|251799801|ref|YP_003014532.1| modification methylase, HemK family [Paenibacillus sp. JDR-2]
 gi|247547427|gb|ACT04446.1| modification methylase, HemK family [Paenibacillus sp. JDR-2]
          Length = 283

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 16/280 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+   ++   L  V G+    ++ D                I R    E +  I+G   F
Sbjct: 1   MEPRSNAERLLLHVLGIDRSTMLRDFGEPFPAAHAAEWVELIRRKAAGEPVQYIIGEEWF 60

Query: 61  YNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y    T++  T  PRPETELLV++ L  A  L   +  +V  ++D+GTGTGA+ + L  +
Sbjct: 61  YGRPFTVTPATLIPRPETELLVEAVLEAADKLWPPDGAEVPTVVDVGTGTGAIGVTLASQ 120

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------------VEGL-F 165
            P ++    D+S  AL +A++NA  +  + R   +Q D  +              E +  
Sbjct: 121 RPRWRVSASDLSPDALAVARTNAARHEAAGRMAFVQGDLLAPFAKRGAAGAALDAEDIRI 180

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DV+VSNPPYI +  +  L  EVRD++PR++LDGG DGL  YR +   +        + + 
Sbjct: 181 DVLVSNPPYIPADDLPGLQPEVRDYEPRLALDGGADGLDPYRRMVGQLPSLAQLPRIVAF 240

Query: 226 EIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           E+G  Q  DV  +  +   +  +    DYGG +R ++  R
Sbjct: 241 ELGMGQARDVAALLRNVGEWDDIRIITDYGGIERHVIAVR 280


>gi|297183692|gb|ADI19817.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium EB000_37G09]
          Length = 295

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +K E + R+ G R+F++    L+  T +PR +TE LV +A AF+  + +     +I
Sbjct: 69  MARRMKGEPVSRLRGKREFWSHDFYLNEATLDPRADTECLVAAACAFAALKPQGARPAQI 128

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + L+LL E P  KGVG DI+  A+  A++NA   GV+ R    Q+ W   +
Sbjct: 129 LDLGTGSGCILLSLLLEQPDAKGVGTDIAALAIAQARANAAMLGVALRAAFHQTSWCDPI 188

Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                 GLFD+I SNPPYI S  +  L  +V D+DP  +L  G DGL  YRT+   +   
Sbjct: 189 AGVFMPGLFDIITSNPPYIGSQAL--LSADVADYDPHHALFAGADGLDDYRTLLPRLPAL 246

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +++     +EIG  QK  V  +     L +     D+ G DR L+ 
Sbjct: 247 MHRHARAFIEIGSTQKDAVSALAIESGLTVCGIELDFSGRDRCLIL 292


>gi|261393389|emb|CAX51025.1| putative protein methyltransferase HemK (protein-glutamine
           N-methyltransferase HemK; protein-(glutamine-N5) MTase
           HemK; M.StyLTHemKP) [Neisseria meningitidis 8013]
          Length = 423

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 258 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 315

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+I SNPPYIE+     L  ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 316 SEGKWDIIASNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415


>gi|328946333|gb|EGG40477.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1087]
          Length = 276

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 114/218 (52%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H     I G  DF  + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHRPAQYINGRSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL      ++    D+S  AL +A+ NA + G++  F  +QSD   ++ G F
Sbjct: 118 TGSGAIALALANSRSDWQITASDLSGDALALAEENAQSCGLNLAF--VQSDCLDAISGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q  DV R+   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGNDVARLL--KKSFPQKRIRVLKDQFGKDRMV 271


>gi|15642177|ref|NP_231809.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121586800|ref|ZP_01676582.1| hemK protein [Vibrio cholerae 2740-80]
 gi|153818816|ref|ZP_01971483.1| hemK protein [Vibrio cholerae NCTC 8457]
 gi|153823574|ref|ZP_01976241.1| hemK protein [Vibrio cholerae B33]
 gi|227082303|ref|YP_002810854.1| hemK protein [Vibrio cholerae M66-2]
 gi|229507744|ref|ZP_04397249.1| methylase of polypeptide chain release factors [Vibrio cholerae BX
           330286]
 gi|229512020|ref|ZP_04401499.1| methylase of polypeptide chain release factors [Vibrio cholerae
           B33]
 gi|229607289|ref|YP_002877937.1| methylase of polypeptide chain release factor [Vibrio cholerae
           MJ-1236]
 gi|254849257|ref|ZP_05238607.1| hemK protein [Vibrio cholerae MO10]
 gi|255745093|ref|ZP_05419042.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS
           101]
 gi|298497807|ref|ZP_07007614.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio cholerae MAK 757]
 gi|18203196|sp|Q9KQ26|HEMK_VIBCH RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.VchAHemK2P
 gi|9656732|gb|AAF95323.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548967|gb|EAX59006.1| hemK protein [Vibrio cholerae 2740-80]
 gi|126510659|gb|EAZ73253.1| hemK protein [Vibrio cholerae NCTC 8457]
 gi|126518909|gb|EAZ76132.1| hemK protein [Vibrio cholerae B33]
 gi|227010191|gb|ACP06403.1| hemK protein [Vibrio cholerae M66-2]
 gi|229351985|gb|EEO16926.1| methylase of polypeptide chain release factors [Vibrio cholerae
           B33]
 gi|229355249|gb|EEO20170.1| methylase of polypeptide chain release factors [Vibrio cholerae BX
           330286]
 gi|229369944|gb|ACQ60367.1| methylase of polypeptide chain release factor [Vibrio cholerae
           MJ-1236]
 gi|254844962|gb|EET23376.1| hemK protein [Vibrio cholerae MO10]
 gi|255736923|gb|EET92319.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS
           101]
 gi|297542140|gb|EFH78190.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio cholerae MAK 757]
          Length = 286

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 127/260 (48%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|149006295|ref|ZP_01830007.1| serine hydroxymethyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|307127430|ref|YP_003879461.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 670-6B]
 gi|147762072|gb|EDK69034.1| serine hydroxymethyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|306484492|gb|ADM91361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 670-6B]
          Length = 279

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273


>gi|332075635|gb|EGI86103.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA17545]
          Length = 279

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY ++L +      PRPETE LV+  LA
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQEDFYGMQLKVDERVLIPRPETEELVELILA 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +         + +LD+GTG+GA+ LAL K  P +     DIS  AL++A  NA    + 
Sbjct: 106 EN-----SETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDALDVANENAKNQNL- 159

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261
            I +    +L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 219 RIVEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKHVRTLKDQFGQDRMVV 273


>gi|325205014|gb|ADZ00468.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240355]
          Length = 273

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|289548685|ref|YP_003473673.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermocrinis albus DSM 14484]
 gi|289182302|gb|ADC89546.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermocrinis albus DSM 14484]
          Length = 270

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 11/260 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           R+ H  L  +  ++   + +  D +   ++ +R+   + + R  +   +  +LG  +FY 
Sbjct: 16  REKHLLLAHILQVTPSDLYLMEDYEVPFNEVERYI--SMLSRLEEGYPLQYLLGEWEFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLV+  L      + K   ++  ++G GTG + + LL E P  
Sbjct: 74  RTFKVEEGVLIPRPETELLVEKILT----TVNKDRPLKGFEIGVGTGCISVTLLLEIPSL 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D++ KAL++A  NA  + V +R   ++   F  V G+ F ++VSNPPYI   + D
Sbjct: 130 VMYADDVNPKALQLAYQNACMHQVQDRLYLMEGSLFEPVRGMRFHLVVSNPPYIPEGMWD 189

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V+ ++ + SL GG  G   Y  IA  +   L +DG+  +EIG++Q   V  IFE 
Sbjct: 190 SLPTTVK-WEGKTSLIGGPKGYEFYEKIASEIHHFLEEDGMFFLEIGHDQGSVVRDIFEE 248

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
           +  F V  FKD  G DRV++
Sbjct: 249 KG-FRVEVFKDLAGQDRVVV 267


>gi|124515208|gb|EAY56719.1| Modification methylase (HemK) [Leptospirillum rubarum]
          Length = 293

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 123/241 (51%), Gaps = 15/241 (6%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           VL D       + + R  + E  H I G   F   R  ++  T  PRPETE LV++ L  
Sbjct: 58  VLPDELSACYASWVERRRQREPFHLITGSVPFLEERFAVAPGTLIPRPETESLVENVLRI 117

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               ++ R   RILDLG G+G + ++LLK+ P    + VD S   LE+++ NA+  GV  
Sbjct: 118 ----LDSRSPERILDLGCGSGILGISLLKKFPKAHCLAVDRSVVPLEVSRKNALALGVLS 173

Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R   +Q DW     ++  FD+IVSNPPYI S  +  L  E+  ++PR +LDGG DGL  Y
Sbjct: 174 RIHFVQGDWTEMLRLDQGFDLIVSNPPYIASGDLSGLDPEILFYEPREALDGGPDGLVFY 233

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-----FKDYGGNDRVLL 261
           R +   +   L+  G+ +VEIG  Q       F S   F+        F D  G DR++L
Sbjct: 234 RRLMAVLPGLLSTGGVAAVEIGSCQG----DFFRSDAGFVSGCGAPLVFPDILGLDRIVL 289

Query: 262 F 262
           +
Sbjct: 290 W 290


>gi|71909296|ref|YP_286883.1| modification methylase HemK [Dechloromonas aromatica RCB]
 gi|71848917|gb|AAZ48413.1| [protein release factor]-glutamine N5-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 270

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 123/255 (48%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S   ++  P+  +         + + R    E +  ++G  +F     
Sbjct: 18  DARLLLQYATGCSHADLLARPEMPVIGPAYEQFQDWVARRAAGEPLAYLVGEAEFRGRVF 77

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PRPETE+L++ ALA  LP +    VV   DLGTG+G V ++L  ESP    V
Sbjct: 78  QVSPAVLIPRPETEVLIELALA-KLPGLAAPKVV---DLGTGSGIVAISLALESPAATVV 133

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            VD+S +A+ +A++NA   G   R D  Q DWFS + G  FD+IVSNPPY+       L 
Sbjct: 134 AVDLSAEAISVARNNAGRLGA--RIDFRQGDWFSPLAGERFDLIVSNPPYVADGDPH-LA 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L    F+P+++L  G DGLS  R I    + HL   G    E GY+Q      +  +   
Sbjct: 191 LNGLPFEPQMALTDGADGLSCIRHIVADAADHLAPGGWLLFEHGYDQGEASRNLLTAAGF 250

Query: 245 FLVNAFKDYGGNDRV 259
                F D  G DRV
Sbjct: 251 KAAFTFPDLAGIDRV 265


>gi|146306095|ref|YP_001186560.1| HemK family modification methylase [Pseudomonas mendocina ymp]
 gi|145574296|gb|ABP83828.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudomonas mendocina ymp]
          Length = 294

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  LD++Q+      ++R  + E +  ILG + F+++ L ++  T  PRP+TELLV++A
Sbjct: 59  PERELDEQQQALFQANLMRRRQGEPVAYILGHQGFWSLELEVAPHTLIPRPDTELLVETA 118

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP       + +LDLGTGTGA+ LAL  E P ++  GVD    A+ +A+ N     
Sbjct: 119 LEL-LPATP----LTVLDLGTGTGAIALALASERPAWRVTGVDRVEDAVALAERNRQRLQ 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    + S WFS++ G  + +I+SNPPYI +        +VR F+P  +L  G DGL 
Sbjct: 174 L-DNAAFVHSHWFSALSGQRYGLILSNPPYIRADDRHLNEGDVR-FEPSSALVAGSDGLD 231

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R I      HL   G   +E G++Q   V  +  +     V++ +D GG++R+ L
Sbjct: 232 DIRAIIQAAPAHLLAGGWLLLEHGFDQAEAVRGLLAAAGFAEVHSRRDLGGHERISL 288


>gi|224368816|ref|YP_002602977.1| HemK [Desulfobacterium autotrophicum HRM2]
 gi|223691532|gb|ACN14815.1| HemK [Desulfobacterium autotrophicum HRM2]
          Length = 295

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 113/224 (50%), Gaps = 9/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99
           I R    E +  I G + F+    T++     PRP+TE+LV+ AL F    + ++++   
Sbjct: 68  IERRGDREPVAYITGTKGFWESEFTVAPGVLIPRPDTEVLVEQALEF----LARKNISMG 123

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+LG G+GAV +++ K +P       DIS   LE+A  N            +   WFS
Sbjct: 124 RVLELGVGSGAVIISIAKANPGLYCFATDISLIPLEVAAFNVKQELELPNLSFVAGSWFS 183

Query: 160 SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              G   FD+IVSNPPYI +  +  L  EV  F+P ++LDGG DGL   R I      HL
Sbjct: 184 PFNGRAKFDLIVSNPPYIPTGDIQGLQPEVSRFEPSLALDGGEDGLDCIRLIMAKACDHL 243

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
              G+  +E G  Q+  V +IF+    F  V  F DY G  RV+
Sbjct: 244 VPGGVLLMETGSGQRRGVEKIFKECPGFSTVEFFNDYAGLHRVV 287


>gi|74312448|ref|YP_310867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sonnei Ss046]
 gi|191166624|ref|ZP_03028452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B7A]
 gi|218694726|ref|YP_002402393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|300821018|ref|ZP_07101167.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           119-7]
 gi|307310033|ref|ZP_07589683.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli W]
 gi|309794303|ref|ZP_07688727.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           145-7]
 gi|331676992|ref|ZP_08377688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H591]
 gi|73855925|gb|AAZ88632.1| possible protoporphyrinogen oxidase [Shigella sonnei Ss046]
 gi|190903273|gb|EDV62994.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B7A]
 gi|218351458|emb|CAU97166.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli 55989]
 gi|300526317|gb|EFK47386.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           119-7]
 gi|306909751|gb|EFN40245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli W]
 gi|308122208|gb|EFO59470.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           145-7]
 gi|315060463|gb|ADT74790.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli W]
 gi|320199251|gb|EFW73842.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli EC4100B]
 gi|323168382|gb|EFZ54063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella sonnei 53G]
 gi|323172434|gb|EFZ58071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli LT-68]
 gi|323185626|gb|EFZ70987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1357]
 gi|323378973|gb|ADX51241.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli KO11]
 gi|331075681|gb|EGI46979.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H591]
          Length = 277

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|168576250|ref|ZP_02722144.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae MLV-016]
 gi|183577963|gb|EDT98491.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae MLV-016]
          Length = 279

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+G + LAL K  P +     D+S +AL++A  NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGTIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQDRMVV 273


>gi|313893578|ref|ZP_07827147.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441849|gb|EFR60272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K  S+  I G +DF  +   ++     PRP+TE L++  L        +   +RILD+ T
Sbjct: 71  KGYSVASITGQKDFMGLTFKVNDKVLIPRPDTESLIEHVL----DTYSEDCNIRILDICT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164
           G G + L+LL   P   GVG+DIS  AL +A+ NA +  +++R +  +SD FS++ G   
Sbjct: 127 GPGTILLSLLHYLPNAVGVGLDISTDALPLARENADSFNLTKRVEFKESDMFSALRGTDE 186

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +     L  +V + +P I+L GG DGL  YR +A     +L   G  
Sbjct: 187 KFDLIVSNPPYIRTGDAKMLSQDVLN-EPHIALFGGEDGLVFYRILAKTCGAYLATSGRV 245

Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260
           + E+GY+Q   V ++ E+   +  +    D GG++RV+
Sbjct: 246 AFEVGYDQAEAVRKLLEATGQYSNIQFIADLGGHNRVV 283


>gi|330719388|ref|ZP_08313988.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc fallax KCTC 3537]
          Length = 292

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 99/182 (54%), Gaps = 3/182 (1%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG   FY     +      PRPETELLVD  L       +K   ++ILD+GTG+GA
Sbjct: 79  VQYVLGTAPFYGREFLVDERVLIPRPETELLVDWVLQDLKANSQKE--IKILDIGTGSGA 136

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   +L E    +G+  DIS  AL +A+ NA    + +R    +SD F+ +  + FDVI+
Sbjct: 137 IVETILLEDQRVQGMAADISTDALTVAQHNAKKFKIRDRISFTESDVFAQIPAMKFDVIL 196

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI+    + +   V DF+P I+L     GL+ Y  IA  ++ +L  DG+   EIGY
Sbjct: 197 SNPPYIDPQDQNEMDQSVIDFEPDIALYAAHQGLAIYENIAQQLNNYLKDDGIAYFEIGY 256

Query: 230 NQ 231
            Q
Sbjct: 257 KQ 258


>gi|169633251|ref|YP_001706987.1| methyl transferase [Acinetobacter baumannii SDF]
 gi|169152043|emb|CAP00927.1| methyl transferase [Acinetobacter baumannii]
          Length = 273

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 113/215 (52%), Gaps = 12/215 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    LE+AK NA T+G+   +F      W+ ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLEVAKENAQTHGLHHVKFAC--GVWYEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GY+Q   V  IF       +   +DYG NDRV L
Sbjct: 233 HGYDQGQAVRGIFAEHGFSEIRTIQDYGRNDRVTL 267


>gi|110805217|ref|YP_688737.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 5 str. 8401]
 gi|110614765|gb|ABF03432.1| possible protoporphyrinogen oxidase [Shigella flexneri 5 str. 8401]
          Length = 277

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I       L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIQQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|172059500|ref|YP_001807152.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MC40-6]
 gi|171992017|gb|ACB62936.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MC40-6]
          Length = 280

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LD    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAYALGWTRTQLITRGDAPLDPASIERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGRPHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI       L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVASAGAFLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  SR    V +  D    +R 
Sbjct: 252 LLVSRGFVAVESLADLAAIERT 273


>gi|78065072|ref|YP_367841.1| modification methylase HemK [Burkholderia sp. 383]
 gi|77965817|gb|ABB07197.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia sp. 383]
          Length = 280

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LD    +R+    A  R L  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDATLDAAAVERYRALEA--RRLAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       L+SDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVAQRNAGKLLDARRPGGPLHWLESDWYAALDPALAFDTIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  S     V +  D    +R 
Sbjct: 252 VLASHGFVAVESLADLAAIERT 273


>gi|212636629|ref|YP_002313154.1| Modification methylase HemK [Shewanella piezotolerans WP3]
 gi|212558113|gb|ACJ30567.1| Modification methylase HemK [Shewanella piezotolerans WP3]
          Length = 280

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D+   L  +       +   P+  LD  Q       + + L+   I  I+G R+F++
Sbjct: 23  AMLDAEVMLLHIINKPRSYLYTWPERDLDSAQVSEFKQMLAKRLRGNPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL  +LP  E     R+LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFRVNPTTLIPRPDTEILVETAL--NLPLAEN---ARVLDLGTGTGAIALSLAHERNEW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +D   +A+ +A  N V N   E  D  QSDWF +VE   F++IVSNPPYI+     
Sbjct: 138 QVCAIDKVEEAVALAIENRV-NLKLEHVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L   + G +    IA+    +L   G   +E GY Q +++      
Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIANCARDYLAPGGYLLLEHGYQQAIELREKLIE 255

Query: 242 RKLFLVNAFKDYGGNDR 258
                V   +D+G NDR
Sbjct: 256 LGFENVATVRDFGSNDR 272


>gi|325127342|gb|EGC50277.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis N1568]
          Length = 273

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 265


>gi|291460254|ref|ZP_06599644.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417201|gb|EFE90920.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 298

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 127/245 (51%), Gaps = 22/245 (8%)

Query: 31  DDRQRFFLTNAIVRSLKHES----IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+R+R   T    R L   +    + ++LG+ DF+ +R  +S     PR +TE+LV+ AL
Sbjct: 55  DEREREERTADFRRLLSERASRIPLQQLLGYTDFFGLRFRVSEAVLSPRQDTEILVEEAL 114

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VT 143
           A S  +         LDL TG+G V ++LL    F   +  D+S  AL  A+ NA   + 
Sbjct: 115 AESTGK-------HALDLCTGSGCVGISLLYYGEFESMLLTDLSAPALRKAEENAERLLP 167

Query: 144 NGVSERFDTLQSDWFSSV------EGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                R   L+SD F  +      +G+  FD+I+SNPPYI    ++ L  EV + +PR++
Sbjct: 168 PEKRARLFLLRSDLFQRISEYEREKGIQGFDLILSNPPYIRRGEIESLEPEVSEHEPRMA 227

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           LDGG DGL  YR IA    +HL   G   +EIG+++  +V  +  S     ++  +D  G
Sbjct: 228 LDGGEDGLFFYREIAREAPKHLRPGGRICLEIGFDEAEEVSALLLSAGFSELSLRRDLSG 287

Query: 256 NDRVL 260
            DRVL
Sbjct: 288 KDRVL 292


>gi|300690279|ref|YP_003751274.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum PSI07]
 gi|299077339|emb|CBJ49964.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum PSI07]
          Length = 295

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDTCSIDDGARARLAELATRRLAGEPMAYLLGEREFFGRMF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ AL     RI+ RD   +LDLGTG+G  AV +AL +     +
Sbjct: 91  RVTPAVLIPRPDTELLVEQALD----RIDDRDAPDVLDLGTGSGIIAVTIALARRD--AR 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESV 178
               D S  AL +A  NA   G +     L  DW++++       +FD+I SNPPYI S 
Sbjct: 145 VWATDTSADALTVAVRNAQALGAANVHVAL-GDWYAALPENDAPPVFDLIASNPPYIAST 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +
Sbjct: 204 DTHLDQGDLR-FEPAGALTDHGDGLRHLRTIVTGAPARLAADGWLLLEHGYDQGPAVRAL 262

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                   V   +D  G+DR
Sbjct: 263 LAEAGFADVFTAQDLAGHDR 282


>gi|82776552|ref|YP_402901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae Sd197]
 gi|309789160|ref|ZP_07683753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1617]
 gi|81240700|gb|ABB61410.1| possible protoporphyrinogen oxidase [Shigella dysenteriae Sd197]
 gi|308922914|gb|EFP68428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1617]
          Length = 277

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL +E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS + G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSELAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|15900892|ref|NP_345496.1| HemK protein [Streptococcus pneumoniae TIGR4]
 gi|111658250|ref|ZP_01408942.1| hypothetical protein SpneT_02000564 [Streptococcus pneumoniae
           TIGR4]
 gi|14972494|gb|AAK75136.1| HemK protein [Streptococcus pneumoniae TIGR4]
          Length = 279

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  LA
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILA 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +  +      + +LD+GTG+GA+ LAL K  P +     DIS  AL++A  NA    + 
Sbjct: 106 ENPVK-----NLMVLDIGTGSGAIALALAKNRPDWSVTAADISQDALDVASENAKNQNL- 159

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273


>gi|26247535|ref|NP_753575.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli CFT073]
 gi|91210433|ref|YP_540419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UTI89]
 gi|110641442|ref|YP_669172.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 536]
 gi|117623430|ref|YP_852343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli APEC O1]
 gi|191170952|ref|ZP_03032503.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli F11]
 gi|218558141|ref|YP_002391054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|218689159|ref|YP_002397371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|227886366|ref|ZP_04004171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 83972]
 gi|237705174|ref|ZP_04535655.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
 gi|300971919|ref|ZP_07171707.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
 gi|300995965|ref|ZP_07181327.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           200-1]
 gi|301046861|ref|ZP_07193978.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           185-1]
 gi|331657263|ref|ZP_08358225.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA206]
 gi|26107936|gb|AAN80135.1|AE016759_409 Protein methyltransferase hemK [Escherichia coli CFT073]
 gi|91072007|gb|ABE06888.1| protein methyltransferase HemK [Escherichia coli UTI89]
 gi|110343034|gb|ABG69271.1| protein methyltransferase HemK [Escherichia coli 536]
 gi|115512554|gb|ABJ00629.1| protein methyltransferase HemK [Escherichia coli APEC O1]
 gi|190908684|gb|EDV68272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli F11]
 gi|218364910|emb|CAR02606.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli S88]
 gi|218426723|emb|CAR07560.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli ED1a]
 gi|226899931|gb|EEH86190.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
 gi|227836570|gb|EEJ47036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 83972]
 gi|294492037|gb|ADE90793.1| protein methyltransferase HemK [Escherichia coli IHE3034]
 gi|300301229|gb|EFJ57614.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           185-1]
 gi|300304662|gb|EFJ59182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           200-1]
 gi|300411044|gb|EFJ94582.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
 gi|307553267|gb|ADN46042.1| protein methyltransferase HemK [Escherichia coli ABU 83972]
 gi|307627265|gb|ADN71569.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|315288567|gb|EFU47965.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           110-3]
 gi|315290790|gb|EFU50162.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           153-1]
 gi|315297346|gb|EFU56626.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 16-3]
 gi|323949671|gb|EGB45557.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252]
 gi|323953933|gb|EGB49732.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263]
 gi|324015638|gb|EGB84857.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 60-1]
 gi|331055511|gb|EGI27520.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA206]
          Length = 277

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIFAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|291617196|ref|YP_003519938.1| HemK [Pantoea ananatis LMG 20103]
 gi|291152226|gb|ADD76810.1| HemK [Pantoea ananatis LMG 20103]
          Length = 344

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 129/253 (50%), Gaps = 8/253 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   +++L + Q   L   + R  + E +  ++G R+F+++ 
Sbjct: 23  RDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE+LV+ ALA  LP        R+LD+GTG+GA+ LA+  E P    
Sbjct: 83  LQVNDATLIPRPDTEILVEQALAH-LP----ESPARVLDMGTGSGAIALAIASERPDCDV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +GVD    A+ +A+ NA    +      +QS WF+ +     D+IVSNPPYI++      
Sbjct: 138 IGVDRIPAAVALAQRNAAHLAIPN-ATFIQSHWFAQITPARLDLIVSNPPYIDANDRHLN 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L     GL+  R + +     L   G   +E G+ Q   V  + +   
Sbjct: 197 EGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQHH 255

Query: 244 LFLVNAFKDYGGN 256
              V    DYGGN
Sbjct: 256 YLSVATANDYGGN 268


>gi|260888150|ref|ZP_05899413.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena
           ATCC 35185]
 gi|330840017|ref|YP_004414597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sputigena ATCC 35185]
 gi|260862179|gb|EEX76679.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena
           ATCC 35185]
 gi|329747781|gb|AEC01138.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sputigena ATCC 35185]
          Length = 292

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 6/263 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G     + V  D  L+  +      A+    +      I G R+F  +  
Sbjct: 31  DAEVLLSHVLGKERIYLYVHFDEPLEKEELAAFRKAVAERARRVPTAYITGRREFMGLDF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLK-ESPFF 122
            +S  T  PRP+TE+LV++A+   L R+ +  R  +R  D+GTGTGA+ L++LK  S   
Sbjct: 91  AVSRATLIPRPDTEILVEAAIE-RLGRLAENGRKPLRFADIGTGTGAIALSVLKYASEDV 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               VDIS  AL IA+ NA   G+S      + D  + +    +D I+SNPPYI     +
Sbjct: 150 AADAVDISGAALAIARENAERLGLSACVHFHEGDLLAPLSHAAYDAILSNPPYIPDADFE 209

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P  +L GG DG+  Y  +A+   ++L   G  +VE G  Q    +R    
Sbjct: 210 RLAPEVRSYEPMTALKGGADGMDFYARLAEAAPQYLRAGGFLAVEAGIGQ-AQKIRALAK 268

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V    D  G +RV++  R
Sbjct: 269 EPWGDVEILPDLAGIERVVVLWR 291


>gi|326692969|ref|ZP_08229974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc argentinum KCTC 3773]
          Length = 335

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + +  +++    ILG   FY     +      PRPETE LV+  L  +     + + V +
Sbjct: 113 VAQLTQNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILQDA--SGTQGEPVSV 170

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+GA+   L+ E+P  KG   DIS  AL +A+SNA   G+ +    ++SD F  V
Sbjct: 171 LDIGTGSGAIIETLMLENPRVKGFAADISPDALAVAESNAQRFGLYQ-LHFVESDVFQGV 229

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             L FD+IVSNPPYI       +   V  F+P+++L    DGL+ Y  IA G+++HL   
Sbjct: 230 ADLTFDIIVSNPPYIARTDEAEMDASVLAFEPQLALFADQDGLAIYAKIAAGLAQHLTAQ 289

Query: 221 GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           G    EIGY Q   VV + +       V   KD+ G DR++
Sbjct: 290 GRAYFEIGYKQGPAVVAMMQQALPDATVTLKKDFAGLDRMV 330


>gi|225858812|ref|YP_002740322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 70585]
 gi|225720454|gb|ACO16308.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 70585]
          Length = 279

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     DIS +AL++A+ NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNL- 159

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+  + +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|306813890|ref|ZP_07448063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|222033011|emb|CAP75751.1| Protein methyltransferase hemK [Escherichia coli LF82]
 gi|305852527|gb|EFM52975.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|312945842|gb|ADR26669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|320195778|gb|EFW70403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli WV_060327]
 gi|324005999|gb|EGB75218.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 57-2]
          Length = 277

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|24375322|ref|NP_719365.1| hemK family protein [Shewanella oneidensis MR-1]
 gi|24350135|gb|AAN56809.1|AE015816_6 hemK family protein [Shewanella oneidensis MR-1]
          Length = 286

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 121/237 (51%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + R  +   +  I+G R+F+++   ++  T  PRP+TE+LV+SA
Sbjct: 48  PEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVESA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L         ++LDLGTGTGA+ LAL  E   ++   VD    A+ +AK+N  TN 
Sbjct: 108 LNLPL-----ESNAKVLDLGTGTGAIALALASERAAWQITAVDKVEDAVALAKANR-TNL 161

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             E+ + LQSDWFS+V    FD+IVSNPPYI+         +VR F+P+ +L    +G +
Sbjct: 162 KLEQVEILQSDWFSAVTSHDFDLIVSNPPYIDEADEHLHQGDVR-FEPQSALTAADEGFA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA     +L  +G   +E G+ Q V +           V   +D+G NDR  +
Sbjct: 221 DLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIELGYQNVATVRDFGSNDRCTM 277


>gi|294793890|ref|ZP_06759027.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 3_1_44]
 gi|294455460|gb|EFG23832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 3_1_44]
          Length = 289

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I+G +DF  +   ++     PRP+TE L++  L  + P   K   VRILD+ T
Sbjct: 71  KGHCVAAIIGEKDFMGLTFKVNDKVLIPRPDTETLIEHVLG-TYP---KDSNVRILDVCT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--- 163
           G G + L+LL   P   GVG++IS  AL +A+ N     +++R   L+SD FS++ G   
Sbjct: 127 GPGTILLSLLHYLPNACGVGLEISTDALLVAEENGERFNLNDRVQFLESDMFSALAGNAE 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IVSNPPYI +     L  +V + +P I+L GG DGL  YR +A     +LN +G  
Sbjct: 187 KFDLIVSNPPYIRTGDAKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRV 245

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
             E+G++Q  +V  +  E+ +   +    D GG++RV+
Sbjct: 246 VFEVGFDQAEEVGALLQETGQYSNIQFIADLGGHNRVV 283


>gi|296313419|ref|ZP_06863360.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea
           ATCC 43768]
 gi|296840050|gb|EFH23988.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea
           ATCC 43768]
          Length = 273

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q+++     + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLMRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++     PRPETE LV++ LA  LP     +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF +    EG +D+IVSNPPYIE+     
Sbjct: 130 ASDISPPALETARKNAADLGA--RVEFAYGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DRV L
Sbjct: 247 GFSGVETLPDLAGLDRVTL 265


>gi|327460377|gb|EGF06714.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1057]
          Length = 276

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF  + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P +K    D+S  AL +A  NA    +S  F  +QSD F ++ G F
Sbjct: 118 TGSGAIALALANSRPDWKITASDLSNDALALAAENAQFCNLSLTF--VQSDCFEAISGSF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA     +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           EIGY Q   V  +  +S     +   KD  G DR++
Sbjct: 236 EIGYKQGDGVAELLKQSFPHKRIRILKDQFGKDRMV 271


>gi|317121005|ref|YP_004101008.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter marianensis DSM 12885]
 gi|315590985|gb|ADU50281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter marianensis DSM 12885]
          Length = 295

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 111/249 (44%), Gaps = 10/249 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L   +V+ +PD  L           I+R  + E +  IL   +FY     ++  T  PRP
Sbjct: 46  LPGARVVAEPDLPLPPAAWARFVQWILRRARREPVAYILQQAEFYGRPFRVTPATLIPRP 105

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV+  L     R        + DLGTGTG V + L  E P +  +  D S  AL++
Sbjct: 106 ETEVLVEVVL-----RTVPAGPAVVADLGTGTGIVAVTLAAERPAWTVLASDCSAAALKV 160

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ NA  +GV  R      DW   +      G    + SNPPY+ +  +  L  E+  ++
Sbjct: 161 ARENAARHGVDGRMRFYVGDWAEPLLAAGWAGKLAAVASNPPYVAAADLPRLQAEIHRYE 220

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++L  G  GL  YR +  G  R L   G   +E+G  Q   V  +  +     V+ + 
Sbjct: 221 PHLALTPGATGLEAYRRLIPGAVRLLAPGGWIFLEVGAGQAPAVQHLLGAVGCRCVSCWP 280

Query: 252 DYGGNDRVL 260
           D  G  RV+
Sbjct: 281 DLAGIPRVV 289


>gi|306825266|ref|ZP_07458608.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432702|gb|EFM35676.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 278

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 130/262 (49%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      + + ++ F+     +   H+    I+G  DF+ ++
Sbjct: 22  ESLSFVYRSLKKLSFTDFVFALQQEVTEEEKQFVEEIFQQLAVHKPAQYIIGHVDFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPETE LV+  L  +       + ++ILD+GTG+GA+ L L K  P +  
Sbjct: 82  LKVDERVLIPRPETEELVELILTEN-----PEENLKILDIGTGSGAIALGLAKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  NA    ++  F   +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQAALELASENARNQNLNIFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F     
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLP 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           E R    V   KD  G DR+++
Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272


>gi|323187442|gb|EFZ72751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli RN587/1]
          Length = 277

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|157150169|ref|YP_001450440.1| protoporphyrinogen oxidase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074963|gb|ABV09646.1| possible protoporphyrinogen oxidase [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 276

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 114/218 (52%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF  + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFNGLNLKVDERVLIPRPETEELVELILSEN-----PETPLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA + G++     +QSD   +++G F
Sbjct: 118 TGSGAIALALANSRPDWQITASDLSRDALSLAAENAQSCGLN--LTLVQSDCLDAIQGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+I SNPPYI     D +GL V   +P ++L    DG + YR IA+    +L + G   +
Sbjct: 176 DIIASNPPYISEEDKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +F  R+ F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVADLF--RQFFPQKRIRVLKDQFGKDRMV 271


>gi|221201721|ref|ZP_03574759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2M]
 gi|221207204|ref|ZP_03580214.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2]
 gi|221172792|gb|EEE05229.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2]
 gi|221178537|gb|EEE10946.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2M]
          Length = 280

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+    A  R    E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRSDRPLDAEAVERYRALEA--RRAAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  
Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  S     V +  D    +R 
Sbjct: 252 LLASHGFDAVESLADLAAIERT 273


>gi|15902969|ref|NP_358519.1| HemK protein [Streptococcus pneumoniae R6]
 gi|116517180|ref|YP_816385.1| HemK protein [Streptococcus pneumoniae D39]
 gi|15458533|gb|AAK99729.1| HemK protein homolog; possible protoporphyrinogen oxidase
           [Streptococcus pneumoniae R6]
 gi|116077756|gb|ABJ55476.1| HemK protein [Streptococcus pneumoniae D39]
          Length = 279

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     DIS +AL++A+ NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEALDLARENAKNQNL- 159

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ YR
Sbjct: 160 -QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYR 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+  + +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|261378642|ref|ZP_05983215.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC
           14685]
 gi|269144979|gb|EEZ71397.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC
           14685]
          Length = 273

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L    G S  +++      + D  R      + R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQHAGGYSRIELVTRGGDEMPDSVRQHADMLVQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++     PRPETE LV++A+   LP     +   I DLGTG+GAV L +  E P     
Sbjct: 76  TVNPSVLIPRPETEHLVEAAIG-RLP-----ECGSIWDLGTGSGAVALTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G +  F      WF +    E  +DVIVSNPPYIE+  +  
Sbjct: 130 ASDISLSALETARKNAADLGAAVEF--AHGSWFDTDMPSERQWDVIVSNPPYIENGDIHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+ +L    DG+S  R +A+G  ++L   G   +E G+NQ   V  +  + 
Sbjct: 188 SQGDLR-FEPKNALTDFSDGMSCIRALAEGAPKYLADGGFLLLEHGFNQGGAVRGVLAAH 246

Query: 243 KLFLVNAFKDYGGNDRV 259
               V    D  G DRV
Sbjct: 247 GFTEVETLTDLAGLDRV 263


>gi|104780101|ref|YP_606599.1| methylase of polypeptide chain release factors [Pseudomonas
           entomophila L48]
 gi|95109088|emb|CAK13785.1| Methylase of polypeptide chain release factors [Pseudomonas
           entomophila L48]
          Length = 276

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PERIVSSEAAELFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVETA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +      R+LDLGTGTGA+ LAL  E P ++   VD   +A+ +A+ N    G
Sbjct: 102 L-----ELVPAKPARVLDLGTGTGAIALALASECPAWQVTAVDRIEEAVALAERNRQRLG 156

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +        S W+ ++EG  FD+I+SNPPYI +     +  +VR F+P  +L  G DGL 
Sbjct: 157 LGN-VQVRASHWYDALEGEHFDLILSNPPYIRAADPHLVAGDVR-FEPSSALVAGEDGLD 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R I     +HL   G   +E GY+Q   V  +  +     V +  D GG++R+ L
Sbjct: 215 DLRVIVAQAPQHLLPGGWLLLEHGYDQAPAVRELLSAGGFVDVASRVDLGGHERISL 271


>gi|220933706|ref|YP_002512605.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219995016|gb|ACL71618.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 274

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 9/204 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R F+ + L +  +   PRPETELLV++AL      I       + DLGTG+GA+ LAL  
Sbjct: 71  RGFWTLDLAVGPEVLIPRPETELLVETALGL----IPTDAAWDLADLGTGSGAIALALAS 126

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           E P  + V  D S  AL +A++NA  +G++  RF  +Q +W++ + G  F ++VSNPPY+
Sbjct: 127 ERPACRVVATDKSPGALAVAEANARDHGLANLRF--VQGEWWAPLAGERFHLVVSNPPYV 184

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                     ++R F+P  +L  G DGL   R I      HL+  G   +E GY+Q   V
Sbjct: 185 AEADPHLARGDLR-FEPPTALASGPDGLDDLRRIIKAAPTHLHPGGHLLLEHGYDQGEAV 243

Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259
             +  +     V  ++D GGN+RV
Sbjct: 244 RALLRTAGFSEVQTWRDLGGNERV 267


>gi|325696482|gb|EGD38372.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK160]
          Length = 276

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF  + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P +K    D+S  AL +A  NA    +S  F  +QSD F ++ G F
Sbjct: 118 TGSGAIALALANSRPDWKITASDLSNDALALAAENAQFCNLSLTF--VQSDCFEAISGSF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA     +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           EIGY Q   V  +  +S     +   KD  G DR++
Sbjct: 236 EIGYKQGDGVAELLKQSFPHKRIRILKDQFGKDRMV 271


>gi|269926537|ref|YP_003323160.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790197|gb|ACZ42338.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 283

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 10/224 (4%)

Query: 6   DSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           DS   L  V G+    ++  ++ +  L D+++F     + R  +HE I  ILG+++FY  
Sbjct: 26  DSELLLASVLGIDRTSLLANLNQEVSLPDQEKFL--GLVERRSRHEPIAYILGYKEFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S     PRPETE+LVD A      ++  +  V + D+GTG+GA+ +++  E P  K
Sbjct: 84  LFCVSRSVLIPRPETEMLVDLA-----KKLATKGAV-VADVGTGSGAIAISIAIERPDVK 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  DIS  AL++A+ N   +GV +R   LQ +    V  + D++V+N PYI     D L
Sbjct: 138 VVATDISHDALDVARRNVQKHGVQDRVFLLQGNLLDPVHEMVDMVVANLPYIPESEADSL 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +V  ++PR +L GG DGL + R +   + +H +    C +E+
Sbjct: 198 QPDVILWEPRTALFGGEDGLEYIRELLGQLPKHCSYGAYCLLEV 241


>gi|194436964|ref|ZP_03069063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 101-1]
 gi|253773789|ref|YP_003036620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161294|ref|YP_003044402.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|297517276|ref|ZP_06935662.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
 gi|300920410|ref|ZP_07136844.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           115-1]
 gi|300928242|ref|ZP_07143779.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           187-1]
 gi|301648135|ref|ZP_07247888.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           146-1]
 gi|307137827|ref|ZP_07497183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|331641742|ref|ZP_08342877.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H736]
 gi|194423947|gb|EDX39935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 101-1]
 gi|242376991|emb|CAQ31714.1| protein-(glutamine-N5) methyltransferase [Escherichia coli
           BL21(DE3)]
 gi|253324833|gb|ACT29435.1| modification methylase, HemK family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973195|gb|ACT38866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|253977409|gb|ACT43079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|300412543|gb|EFJ95853.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           115-1]
 gi|300463711|gb|EFK27204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           187-1]
 gi|301073721|gb|EFK88527.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           146-1]
 gi|309701511|emb|CBJ00818.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Escherichia coli ETEC H10407]
 gi|315615946|gb|EFU96572.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 3431]
 gi|323937933|gb|EGB34197.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520]
 gi|323962790|gb|EGB58368.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489]
 gi|323973390|gb|EGB68577.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007]
 gi|331038540|gb|EGI10760.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H736]
 gi|332342794|gb|AEE56128.1| protein-(glutamine-N5) methyltransferase HemK [Escherichia coli
           UMNK88]
          Length = 277

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIRILQSDWFSALAGQQFTMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|329117399|ref|ZP_08246116.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus parauberis NCFD 2020]
 gi|326907804|gb|EGE54718.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus parauberis NCFD 2020]
          Length = 282

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 11/227 (4%)

Query: 38  LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L  +I+  LK H S   I G   F ++ L++      PRPETE LV      SL   E  
Sbjct: 54  LFQSIMTQLKTHRSPQYITGNAYFRDLILSVDERVLIPRPETEELV------SLILEEHS 107

Query: 97  DV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           D  +R+LD+GTG+GA+ L L KE P ++    DIS  AL +A+ N     +    + L S
Sbjct: 108 DQSLRVLDIGTGSGAIALGLKKERPNWQIDAADISLDALSLAQENG--RALDLEINWLHS 165

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D FS++   +D+IVSNPPYI     D +GL V   +P ++L    +GL+ YR I +  S 
Sbjct: 166 DLFSNILDKYDIIVSNPPYIAFEDKDEVGLNVWHSEPHLALFADDNGLAIYRAILEQASH 225

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
           +L +DG    EIGY Q  D+  + E+      V   +DY G DR+++
Sbjct: 226 YLTEDGAIYFEIGYKQGQDLKELAEANFPQCRVRLLQDYFGKDRMVV 272


>gi|194398713|ref|YP_002037656.1| methyltransferase, HemK family protein [Streptococcus pneumoniae
           G54]
 gi|194358380|gb|ACF56828.1| methyltransferase, HemK family protein [Streptococcus pneumoniae
           G54]
          Length = 279

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 119/239 (49%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA     +
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNFN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G DR+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQDRMVV 273


>gi|304388692|ref|ZP_07370752.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|254672055|emb|CBA04658.1| heme biosynthesis protein [Neisseria meningitidis alpha275]
 gi|304337359|gb|EFM03533.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
          Length = 423

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415


>gi|193069963|ref|ZP_03050911.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E110019]
 gi|192956716|gb|EDV87171.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E110019]
          Length = 277

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+  A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSQAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|229524174|ref|ZP_04413579.1| methylase of polypeptide chain release factors [Vibrio cholerae bv.
           albensis VL426]
 gi|229337755|gb|EEO02772.1| methylase of polypeptide chain release factors [Vibrio cholerae bv.
           albensis VL426]
          Length = 286

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLVSLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILCD 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G+DRV L
Sbjct: 258 LGYQNIITEQDYAGHDRVTL 277


>gi|254671226|emb|CBA08440.1| heme biosynthesis protein [Neisseria meningitidis alpha153]
          Length = 423

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 204 RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 257

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 258 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 315

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 316 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 374

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 375 GFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTL 415


>gi|304321560|ref|YP_003855203.1| modification methylase, HemK family protein [Parvularcula
           bermudensis HTCC2503]
 gi|303300462|gb|ADM10061.1| modification methylase, HemK family protein [Parvularcula
           bermudensis HTCC2503]
          Length = 318

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 9/218 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  + G ++F+     ++     PRPETELLV++AL   LP        R+LD
Sbjct: 104 RRRRGEPVAYLTGEQEFFGRDFHVTPAVLIPRPETELLVEAAL-RPLPHGG-----RLLD 157

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+G + + +L E P  +G  +D+S +AL +A+ NA  +GV  R       + ++  G
Sbjct: 158 LGTGSGCIAVTILAERPDSRGEAIDLSAEALAVARINARRHGVEGRLGLAPVPFEAAPSG 217

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+I+SNPPYI       L   V  ++PR +L  G DGL  YR +   +++ L   G  
Sbjct: 218 PFDLILSNPPYIPD--DQSLPTSVESYEPRQALRAGADGLDAYRVLGPVIAQRLAPQGTA 275

Query: 224 SVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
            +EIG +Q   V  +   S  +  V+  +D  G DR++
Sbjct: 276 LLEIGADQAAAVTALLRRSFPVHQVSVKRDLAGLDRMV 313


>gi|221213332|ref|ZP_03586307.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD1]
 gi|221166784|gb|EED99255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD1]
          Length = 280

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+ +  A  R    E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRVLEA--RRAAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAR 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  
Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  S     V +  D    +R 
Sbjct: 252 LLASHGFDAVESLADLAAIERT 273


>gi|78358025|ref|YP_389474.1| HemK family modification methylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220430|gb|ABB39779.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 297

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 11/247 (4%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           Q++V    +L +++       I+R  + E +  + G R+FY     +S+DT  PRP+TEL
Sbjct: 49  QLLVRRGHMLTEKEYAQAEKLILRRAEGEPVAYLTGSREFYGREFAVSTDTLIPRPDTEL 108

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+D+ L    P       +R  DLGTG+G + +++  E P   G  VDIS  AL  A+ N
Sbjct: 109 LIDT-LKKEYP---PHAALRFADLGTGSGCIAVSVAAEMPSAHGTAVDISSGALHTAREN 164

Query: 141 AVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196
           A  + V++R   +Q+D+ S +     FDV++SNPPY+ +   + L  EVR  +P+ +L  
Sbjct: 165 AARHRVADRVAFVQADFTSPLFRPASFDVVLSNPPYVSATEYETLSPEVRCHEPQRALVP 224

Query: 197 -DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR--KLFLVNAFKDY 253
                 GL H   +       L   GL  +E G+ Q  D++ + +++  +  +    +D 
Sbjct: 225 DTPASTGLEHAAALLPLAFGWLKPGGLFLMEFGWKQGPDIMAMVKAQHGQWTVAVILQDL 284

Query: 254 GGNDRVL 260
            G DR L
Sbjct: 285 AGRDRAL 291


>gi|225629882|ref|YP_002726673.1| modification methylase, HemK family [Wolbachia sp. wRi]
 gi|225591863|gb|ACN94882.1| modification methylase, HemK family [Wolbachia sp. wRi]
          Length = 284

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 138/257 (53%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D    +  V G+    +IV+  D V  +++  F      R+ ++  I +I+G R+F++  
Sbjct: 26  DCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERY-PISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E L+ + L +  P  ++R  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGCLLISVLSEYKYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S +A ++A  N   + +  R     S W    + LFD+I+SNPPYI+   +  L 
Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSWIECSD-LFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +P+ +LDGGIDGL+ Y +I   + R L K+G   +EIG +Q  ++ +I  S +L
Sbjct: 201 AEVQK-EPKTALDGGIDGLNCYLSIFPILRRCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258

Query: 245 FLVNAFKDYGGNDRVLL 261
                  D  G  R ++
Sbjct: 259 AFQEYVYDLAGMKRCIV 275


>gi|90961567|ref|YP_535483.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius UCC118]
 gi|90820761|gb|ABD99400.1| Peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius UCC118]
          Length = 279

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D    +C        Q++++  + +DD+    L   I    +   +  ++G++DFY 
Sbjct: 23  TLEDVDYLICGQMVWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      +
Sbjct: 83  LRLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNW 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       
Sbjct: 139 NIFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIY 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +   V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF +S
Sbjct: 197 MDKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +   KD  GNDR++
Sbjct: 257 FPNSEITLKKDINGNDRMI 275


>gi|322376709|ref|ZP_08051202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. M334]
 gi|321282516|gb|EFX59523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. M334]
          Length = 278

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      + + ++ F+     +   H+    I+G  DF+ ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVTEEEKQFVKEIYQQLAAHKPAQYIIGHADFFGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPETE LV+  L  +       + + +LD+GTG+GA+ LAL K  P +  
Sbjct: 82  LIVDERVLIPRPETEELVEIILDEN-----HEENLSVLDIGTGSGAIALALSKNRPDWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS +ALE+A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQEALELASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F     
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           E R    V   KD  G DR+++
Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272


>gi|239501458|ref|ZP_04660768.1| methyl transferase [Acinetobacter baumannii AB900]
          Length = 273

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 12/213 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP+        I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+        L     +PR +L     GL+    I       L   G  ++E
Sbjct: 176 LIVSNPPYIDPEDEHMQALAT---EPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            GY+Q   V  +F       +   +DYG NDRV
Sbjct: 233 HGYDQGQAVRNVFAEHGFSEIRTIQDYGRNDRV 265


>gi|260549388|ref|ZP_05823607.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|260407497|gb|EEX00971.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
          Length = 271

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 111/215 (51%), Gaps = 12/215 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  + G + F+ + L ++SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGT
Sbjct: 63  EPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLP-----NKANIVDLGTGT 117

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFD 166
           GA+ LAL  E P +     DI    L IAK NA T+G+   +F      WF ++E   FD
Sbjct: 118 GAIALALASERPDWFVTATDIYAPTLNIAKENAQTHGLYHVKFAC--GAWFEALEPQQFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+    +   ++    +PR +L     GL+    I       L   G   +E
Sbjct: 176 LIVSNPPYIDP---EDEHMQALATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIVLE 232

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GY+Q   V  IF       +   +DYG NDRV L
Sbjct: 233 HGYDQGQAVRGIFTEHGFSEIKTIQDYGQNDRVTL 267


>gi|149012960|ref|ZP_01833849.1| HemK protein [Streptococcus pneumoniae SP19-BS75]
 gi|303255577|ref|ZP_07341628.1| hemK protein [Streptococcus pneumoniae BS455]
 gi|303260465|ref|ZP_07346433.1| hemK protein [Streptococcus pneumoniae SP-BS293]
 gi|303262822|ref|ZP_07348759.1| hemK protein [Streptococcus pneumoniae SP14-BS292]
 gi|303265292|ref|ZP_07351202.1| hemK protein [Streptococcus pneumoniae BS397]
 gi|303266499|ref|ZP_07352386.1| hemK protein [Streptococcus pneumoniae BS457]
 gi|303268382|ref|ZP_07354178.1| hemK protein [Streptococcus pneumoniae BS458]
 gi|147763113|gb|EDK70054.1| HemK protein [Streptococcus pneumoniae SP19-BS75]
 gi|301801855|emb|CBW34573.1| putative methyltransferase [Streptococcus pneumoniae INV200]
 gi|302597433|gb|EFL64528.1| hemK protein [Streptococcus pneumoniae BS455]
 gi|302636020|gb|EFL66518.1| hemK protein [Streptococcus pneumoniae SP14-BS292]
 gi|302638377|gb|EFL68844.1| hemK protein [Streptococcus pneumoniae SP-BS293]
 gi|302642103|gb|EFL72454.1| hemK protein [Streptococcus pneumoniae BS458]
 gi|302643950|gb|EFL74210.1| hemK protein [Streptococcus pneumoniae BS457]
 gi|302645157|gb|EFL75394.1| hemK protein [Streptococcus pneumoniae BS397]
          Length = 279

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|168483092|ref|ZP_02708044.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1873-00]
 gi|182683969|ref|YP_001835716.1| hemK protein [Streptococcus pneumoniae CGSP14]
 gi|172043511|gb|EDT51557.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1873-00]
 gi|182629303|gb|ACB90251.1| hemK protein [Streptococcus pneumoniae CGSP14]
          Length = 279

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|161526058|ref|YP_001581070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans ATCC 17616]
 gi|189349227|ref|YP_001944855.1| HemK protein [Burkholderia multivorans ATCC 17616]
 gi|160343487|gb|ABX16573.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans ATCC 17616]
 gi|189333249|dbj|BAG42319.1| HemK protein [Burkholderia multivorans ATCC 17616]
          Length = 280

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+    A  R    E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRALEA--RRAAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLAHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  
Sbjct: 193 HDPHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  S     V +  D    +R 
Sbjct: 252 LLASHGFDAVESLADLAAIERT 273


>gi|54295178|ref|YP_127593.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens]
 gi|53755010|emb|CAH16498.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens]
          Length = 287

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%), Gaps = 7/251 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC V   +   +   PD+++   Q       I +  +   I  I G R+F+++ L ++ 
Sbjct: 29  LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P ++    D 
Sbjct: 89  NVLIPRHETEHLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPLWRIDACDF 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +ALE+A  NA T G++   +   S WF+++    +  IVSNPPYI          +VR
Sbjct: 145 SKEALELACYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKQGDVR 203

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I        ++
Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISTILNQLGYKNIH 262

Query: 249 AFKDYGGNDRV 259
            ++D  G+DRV
Sbjct: 263 CWQDLQGHDRV 273


>gi|315613126|ref|ZP_07888036.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           ATCC 49296]
 gi|315314688|gb|EFU62730.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           ATCC 49296]
          Length = 278

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 12/217 (5%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    I+G  DF+ ++L +      PRPETE LV+  LA +       + +++LD+GTG
Sbjct: 65  HKPAQYIVGHADFFGMQLKVDERVLIPRPETEELVELILAEN-----PEENLKVLDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ L L K  P +     DIS  AL++A  NA    ++  F   +SD F+ +   +D+
Sbjct: 120 SGAIALGLAKNRPDWSVTAADISKDALQLASENARNQNLNIFFK--KSDCFAEISEKYDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       +GL V   +P ++L    DGL+ YR IA+    +L   G   +EI
Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLTDGGKIYLEI 237

Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
           GY Q   V  +F  RK      +   KD  G DR+++
Sbjct: 238 GYKQGQSVPALF--RKYLPEKRIRTLKDQFGQDRMVV 272


>gi|229519156|ref|ZP_04408599.1| methylase of polypeptide chain release factors [Vibrio cholerae
           RC9]
 gi|229343845|gb|EEO08820.1| methylase of polypeptide chain release factors [Vibrio cholerae
           RC9]
          Length = 286

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 126/258 (48%), Gaps = 13/258 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I   
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILRD 257

Query: 242 RKLFLVNAFKDYGGNDRV 259
                +   +DY G+DRV
Sbjct: 258 LGYQNIITEQDYAGHDRV 275


>gi|260772291|ref|ZP_05881207.1| Polypeptide chain release factor methylase [Vibrio metschnikovii
           CIP 69.14]
 gi|260611430|gb|EEX36633.1| Polypeptide chain release factor methylase [Vibrio metschnikovii
           CIP 69.14]
          Length = 280

 Score =  119 bits (299), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 14/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  LD          + R +  E I  I+G R+F+++ L
Sbjct: 25  DAALLLCHVLQKPRSYLLTWPDKRLDADAISAFEVLLARRIAGEPIAYIIGEREFWSLPL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            ++  T  PRP+TE LV+ AL       +K  ++   ILDLGTGTGA+ LAL  E P   
Sbjct: 85  KVAPSTLIPRPDTERLVELAL-------DKAVLIDGDILDLGTGTGAIALALASELPQRH 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
            +G+D+  +A+E+A+ N     +S     LQ  WF+ +     F +I SNPPYIE     
Sbjct: 138 VLGIDLRSEAVELAEDNRKRLQLSN-VTFLQGSWFTPLANGIKFALIASNPPYIEEHDPH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L  G +GL+  + IA     +L   G    E GY Q   V  I   
Sbjct: 197 LQQGDVR-FEPRSALVAGDNGLADIKHIATSAREYLLDRGWLLFEHGYQQGKAVRAILSE 255

Query: 242 RKLFLVNAFKDYGGNDRVLL-FCR 264
                V   +DY GNDRV L  CR
Sbjct: 256 LGYQQVVTEQDYAGNDRVTLGQCR 279


>gi|56417124|ref|YP_154198.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           St. Maries]
 gi|222475489|ref|YP_002563906.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Florida]
 gi|255003477|ref|ZP_05278441.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Puerto Rico]
 gi|255004602|ref|ZP_05279403.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Virginia]
 gi|56388356|gb|AAV86943.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           St. Maries]
 gi|222419627|gb|ACM49650.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Florida]
          Length = 285

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 8/228 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+     +  G+S+  ++VD D  ++  +  RFF    + R L  E +  ILG R+F+ +
Sbjct: 28  DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++SD  +PR +TE +V SA+   + + + R++  I DLGTGTG + +ALL       
Sbjct: 86  DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRHAT 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  L
Sbjct: 143 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             EVR  +P  +LDGG  G+  Y  I   + + L   G   +EIG +Q
Sbjct: 202 QREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 249


>gi|107024141|ref|YP_622468.1| HemK family modification methylase [Burkholderia cenocepacia AU
           1054]
 gi|116688533|ref|YP_834156.1| HemK family modification methylase [Burkholderia cenocepacia
           HI2424]
 gi|105894330|gb|ABF77495.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116646622|gb|ABK07263.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia HI2424]
          Length = 280

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D+ LD    +R+    A  R +  E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEA--RRVAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPHAAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVAQRNADKLLDAHRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  R I  G   +L   G   +E GY+Q   V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRAIVAGAGAYLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           I  S     V +  D    +R 
Sbjct: 252 ILASHGFVAVESLADLAAIERT 273


>gi|331006966|ref|ZP_08330209.1| Methylase of polypeptide chain release factors [gamma
           proteobacterium IMCC1989]
 gi|330419228|gb|EGG93651.1| Methylase of polypeptide chain release factors [gamma
           proteobacterium IMCC1989]
          Length = 289

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 117/237 (49%), Gaps = 4/237 (1%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ +L   Q+      + R L  E I  I+G ++F+++ L ++  T  PRP+TE++V++A
Sbjct: 51  PEKLLTVEQQTIFNQLMQRRLNGEPIAYIVGEKEFWSLALFVNESTLIPRPDTEVMVETA 110

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+  +   E      ++DLGTGTGA+ LAL  E P +  +  D S  A E+AK N   + 
Sbjct: 111 LSLFVDD-EPEKQRSVVDLGTGTGAIALALASEKPCWDIIAADNSVAACELAKKNQQRHQ 169

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +      L SDW  +V+    D+IVSNPPYI          +VR F+P  +L    +GL+
Sbjct: 170 L-HNVTVLCSDWLVAVDVADVDLIVSNPPYIHENDPHLFQGDVR-FEPHSALTAKNNGLA 227

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              TI       L   G   +E GY Q  +V  I +  +  L     D  G  R+ +
Sbjct: 228 DIETIVLQAKHVLRPSGWLLIEHGYQQSAEVKEILQKNQYTLCRTINDMAGQSRMTM 284


>gi|126642198|ref|YP_001085182.1| methyl transferase [Acinetobacter baumannii ATCC 17978]
          Length = 206

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 12/210 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           + G + F+ + L ++SDT  PRP+TE+L+++ L  +LP+        I+DLGTGTGA+ L
Sbjct: 1   MTGSQPFWTLDLKVTSDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGTGAIAL 55

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSN 171
           AL  E P +     DI    L++AK NA T+G+   +F      WF ++E   FD+IVSN
Sbjct: 56  ALASERPNWFVTATDIYAPTLDVAKENAQTHGLHHVKFAC--GAWFEALEPQQFDLIVSN 113

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI+    +   ++    +PR +L     GL+    I       L   G  ++E GY+Q
Sbjct: 114 PPYIDP---EDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQ 170

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              V  IF       +   +DYG NDRV L
Sbjct: 171 GQAVRGIFAEHGFSEIKTIQDYGQNDRVTL 200


>gi|78043637|ref|YP_361355.1| HemK family modification methylase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995752|gb|ABB14651.1| modification methylase, HemK family [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 285

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 12/267 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M AL D+   L  V G+S   +   P+ VL + +     + + R      +  ++G ++F
Sbjct: 23  MPAL-DAELLLAHVLGISRVAIYTRPERVLSEYEWERFVDHVERRASRIPLAYLIGKKEF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   ++ +   PRPETEL+V+  + F     + R +  + D+GTG+GAV +AL    P
Sbjct: 82  YGLDFFVTPEVLIPRPETELMVEEGINFLR---QYRGLKLVADVGTGSGAVGVALACHIP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYI 175
                 +DIS +AL++A+ NA  +GV ER      D    +      G F +I +N PYI
Sbjct: 139 LGLFFLLDISEEALKVARVNAHHHGVDERVILGHGDLLEPLSKLDFSGKFSLITANLPYI 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +  L  EV+  +P+I+LDGG DGL  YR +     + L +DG+  +EI   Q   +
Sbjct: 199 PTEELSTLMPEVQK-EPQIALDGGEDGLMLYRRLLPEAHKLLAEDGVMLLEIAPYQGKAI 257

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262
               E+ KL+ V   KD  G+DR+++ 
Sbjct: 258 TA--EAEKLYRVEIKKDLAGHDRLVIL 282


>gi|169833726|ref|YP_001694465.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168996228|gb|ACA36840.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 279

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273


>gi|81428745|ref|YP_395745.1| putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78610387|emb|CAI55437.1| Putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 289

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 7/214 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +    ILG+ +FY     ++  T  PR ETE LV+  L  S+  ++ R + ++LD+GTG+
Sbjct: 69  QPAQYILGYANFYGRDFKVTPATLIPRLETEELVEWVL--SVAPVKDRPL-KVLDVGTGS 125

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           GA+ + L  E P ++   VDIS  A+ +A+ NA T G   + D ++ D+ + V G  FDV
Sbjct: 126 GAIAITLACERPDWQVSAVDISPAAIAVAQQNAQTLGA--KVDFIEGDFLTPVMGQQFDV 183

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       +   V   +P ++L    +GL+ Y   A  V   L  DG   +E 
Sbjct: 184 IVSNPPYIAEDERSVMDASVLKHEPDLALFAPNNGLAFYERFAQEVPAFLEPDGALFLEF 243

Query: 228 GYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           GY QK  +VRIFE +  LF +   KD     R++
Sbjct: 244 GYQQKEAIVRIFEQKDPLFSLEVQKDMANWSRMM 277


>gi|209918453|ref|YP_002292537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SE11]
 gi|209911712|dbj|BAG76786.1| putative methyltransferase [Escherichia coli SE11]
 gi|324017538|gb|EGB86757.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           117-3]
          Length = 277

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ + + NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLTQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|218514634|ref|ZP_03511474.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli 8C-3]
          Length = 120

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 74/118 (62%)

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +RF  +QS WF ++ G F  IVSNPPYI S ++  L  EV  FDP  +LDGG DGL  
Sbjct: 1   MQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDA 60

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE++    + + KDYG NDR L+F 
Sbjct: 61  YHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSVKDYGQNDRALMFA 118


>gi|257467858|ref|ZP_05631954.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317062147|ref|ZP_07926632.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313687823|gb|EFS24658.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 372

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 6/220 (2%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           +R    + +  +LG  +FY     +      PR +TE+LV+         + + +  ++L
Sbjct: 151 LRGKNRKPLQYLLGEWEFYGYPFKVDERVLIPRSDTEILVEQCKII----LNELEAPKVL 206

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+GA+ ++L KE       G DIS  ALE+AK+N   N + E    ++SD FSS +
Sbjct: 207 DIGTGSGAIAISLGKECAHSDITGADISEGALEVAKANGELNKI-ENVKFIKSDVFSSFK 265

Query: 163 GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            + FD+IVSNPPYI     + L  EV +++P  +L    +G   Y  I+     +LN+ G
Sbjct: 266 DMKFDLIVSNPPYIPLEEYNELMPEVLNYEPSSALTDNGNGYYFYSKISKEACDYLNEGG 325

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             + E+GYNQ   V  + E     +++  KDYGG DRV++
Sbjct: 326 FLAFEVGYNQAEVVKELMEENGFDVLSIVKDYGGIDRVVI 365


>gi|42521716|ref|NP_967096.1| HemK protein [Bdellovibrio bacteriovorus HD100]
 gi|39574246|emb|CAE77750.1| HemK protein [Bdellovibrio bacteriovorus HD100]
          Length = 293

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 140/270 (51%), Gaps = 22/270 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L     L   Q+ +  D  + D +   L   + R    E +  I+G+RDF+N R 
Sbjct: 25  DAELLLAHGLKLERIQLYLRFDQPMKDEELAVLRELVRRRASGEPVAYIMGYRDFFNHRF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++    PRPETE +V+  LA++    +K   + ++DLG G+G + L+LLKE P  K +
Sbjct: 85  EVNNQVLIPRPETEHIVEDVLAWA---SDKEASLGLIDLGCGSGCIGLSLLKEYPNAKLI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------------DVIVSNPP 173
            VD+   A+E+A+ NA +  V++R   L  D   +VE +             DV+VSNPP
Sbjct: 142 AVDLLPGAIEVAQRNAQSLDVADRVQFLNLD-AGNVEAIMSAYKDFTGQSSIDVLVSNPP 200

Query: 174 YIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI S   D   +E  V+ F+P  +L     GL+  +  +   + +L   GL  +E+G +Q
Sbjct: 201 YIAS---DDPQVEENVKKFEPNSALYAEDSGLALLKGWSKAFAPYLKTPGLMLMEMGMSQ 257

Query: 232 KVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
              + + +ES K+F  ++  KD  G+DRV+
Sbjct: 258 GPAMKQAYESLKIFNEISVIKDLSGHDRVI 287


>gi|304438486|ref|ZP_07398426.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304368569|gb|EFM22254.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 292

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G     + V  D  L+  +     + +     H  I  ILG R+F  +  
Sbjct: 30  DAEVLLAAVLGRDRMYLYVHFDEPLEPAELATFRSYVKERGAHVPIAYILGRREFMGLAF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ DT  PRP+TE+L   A+     R E     +R  D+GTGTGA+ L++L  +   + 
Sbjct: 90  RVTRDTLIPRPDTEILAQFAVDTLRARAEAGAGELRFADIGTGTGAIALSVLHHTEGTRA 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VDIS  A  +A  NA T G++ER + L  D  + + G  + +I+SNPPYI S  V  L
Sbjct: 150 DAVDISPAAAAVAAENAATLGLTERIEVLTGDLTAPLFGRSYAMILSNPPYIPSADVKTL 209

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
             +V+ ++P ++LDGG DGL+ YR +       L + G+ +VE+G ++  DV  +  +  
Sbjct: 210 MEDVQAYEPHLALDGGADGLAVYRCLLRDAPDLLTEGGVLAVEVGVHEATDVAALMAAHP 269

Query: 243 KLFLVNAFKDYGGNDRVLL 261
           ++      +D  G +RV++
Sbjct: 270 RIVRTKTLRDLAGIERVVV 288


>gi|148359877|ref|YP_001251084.1| protein methyltransferase HemK [Legionella pneumophila str. Corby]
 gi|296107927|ref|YP_003619628.1| HemK protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148281650|gb|ABQ55738.1| protein methyltransferase HemK [Legionella pneumophila str. Corby]
 gi|295649829|gb|ADG25676.1| HemK protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 287

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 7/251 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC V   +   +   PD+++   Q       I +  +   I  I G R+F+++ L ++ 
Sbjct: 29  LLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFWSLSLKVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +   PR ETE LV+ AL      I  ++ V +L+LGTG+GA+ LAL KE P +     D 
Sbjct: 89  NVLIPRHETERLVELALEL----IPDKENVSVLELGTGSGAIALALAKERPLWHIDACDF 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +ALE+A+ NA T G++   +   S WF+++    +  IVSNPPYI          +VR
Sbjct: 145 SKEALELARYNAKTLGLN-NINFCHSYWFNNLPLKQYHAIVSNPPYIAENDPHLKKGDVR 203

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I        ++
Sbjct: 204 -FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILNQLGYKNIH 262

Query: 249 AFKDYGGNDRV 259
            ++D  G+DRV
Sbjct: 263 CWQDLQGHDRV 273


>gi|168487486|ref|ZP_02711994.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1087-00]
 gi|183569705|gb|EDT90233.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1087-00]
          Length = 279

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFIEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273


>gi|94676905|ref|YP_588738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94220055|gb|ABF14214.1| protein methyltranferase HemK [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 281

 Score =  119 bits (298), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 133/261 (50%), Gaps = 13/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++   S   ++   +++L+D Q   L N + R L+ E I  I+G  +F+++ +
Sbjct: 24  DAELLLGQIVSTSRAHILAFGNNLLNDNQYKQLENLLERRLRGEPIAYIIGEWEFWSLPI 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S DT  PRP+TE LV+ AL   LP   K     +LDLGTGTGA+ LAL  E P ++  
Sbjct: 84  RVSPDTIIPRPDTECLVEQALGLLLPIHAK-----VLDLGTGTGAITLALASERPSWQFT 138

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIV 180
           GVD    A+E+A  NA   G++  RF  L   WF    S V   + +I+SNPPY+++   
Sbjct: 139 GVDNHPGAVELADINAARLGLNNVRF--LCGSWFEPLQSQVTPRYSLIISNPPYVDANDP 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
               L V  F+P+ +L    +G++    I    S +L   G   +E G+ Q  +V  +  
Sbjct: 197 HLNNLGVC-FEPKSALVADCNGIADLAAICCQASTYLQHKGWIILEHGWLQGKEVRTLLM 255

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 +    DY  ++RV +
Sbjct: 256 KAGFIHIVTTHDYSNHERVTM 276


>gi|215486444|ref|YP_002328875.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312966452|ref|ZP_07780674.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 2362-75]
 gi|215264516|emb|CAS08883.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli O127:H6 str. E2348/69]
 gi|312288905|gb|EFR16803.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 2362-75]
          Length = 277

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLTI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|78212026|ref|YP_380805.1| HemK family modification methylase [Synechococcus sp. CC9605]
 gi|78196485|gb|ABB34250.1| modification methylase, HemK family [Synechococcus sp. CC9605]
          Length = 301

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 120/246 (48%), Gaps = 9/246 (3%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNVRLTLSSDTFEPRPET 78
           ++++DP   +D  Q   + + +     H ++    ++G   + +V L  S     PR ET
Sbjct: 52  RLLLDPTRSVDLEQSLEMLSGLWERHLHGNVPLQHLVGLCPWRDVLLESSPAALIPRQET 111

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLVD AL+    + +     R  DLGTG+GA+ +AL +  P   G GVD+S  AL++A+
Sbjct: 112 ELLVDLALS----QFKATPPARWADLGTGSGAIAVALARAWPTAPGHGVDLSSDALQLAE 167

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            N                W+S ++   G  D++VSNPPYI   +VD L   VRD +P ++
Sbjct: 168 RNLERCAPHHSCSLHLGSWWSPLKSWWGSLDLVVSNPPYIPGAVVDGLEAVVRDHEPHLA 227

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG DGL   R + DG    L+  G   +E  ++Q   V+++     L    A  D  G
Sbjct: 228 LLGGADGLDAIRAVVDGAPTGLSPGGWLLLEHHHDQSAQVMQLLRDAGLVEGRAAADLEG 287

Query: 256 NDRVLL 261
             R  L
Sbjct: 288 TLRFAL 293


>gi|289167969|ref|YP_003446238.1| protoporphyrinogen oxidase [Streptococcus mitis B6]
 gi|288907536|emb|CBJ22373.1| protoporphyrinogen oxidase [Streptococcus mitis B6]
          Length = 278

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 17/262 (6%)

Query: 6   DSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R +  LS    +      +   +  F+     +   H+    I+G  DFY ++
Sbjct: 22  ESLSFVYRSLKNLSFTDFVFALQQEVTKEEEVFVKGIFQQLAAHKPAQYIIGQTDFYGMQ 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPETE LV+  LA +       + +++LD+GTG+GA+ L L K    +  
Sbjct: 82  LKVDERVLIPRPETEELVELILAEN-----SEESLKVLDIGTGSGAIALVLAKNRAAWSV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS +AL++A  NA     +  F   +SD F+ +   +D+IVSNPPYI       +G
Sbjct: 137 TAADISQEALDLASENAKNQKFNIFFK--KSDCFAEIFEKYDIIVSNPPYISREDESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----- 239
           L V   +P ++L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F     
Sbjct: 195 LNVLHSEPHLALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLP 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           E R    V   KD  G DR+++
Sbjct: 255 EKR----VRTLKDQFGQDRMVV 272


>gi|90416953|ref|ZP_01224882.1| hemK protein [marine gamma proteobacterium HTCC2207]
 gi|90331300|gb|EAS46544.1| hemK protein [marine gamma proteobacterium HTCC2207]
          Length = 277

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 128/259 (49%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC V G++   +   P+  +           + R +  E +  ++G + F+++ L
Sbjct: 23  DCELLLCFVLGVAPSYLKTWPERQVSGDHWAQFDALLQRRIAGEPVAYLIGSQGFWSLDL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRPETELLV+ AL  +LP     +   +LDLGTGTGA+ LAL  E   ++  
Sbjct: 83  EVSPATLIPRPETELLVEVALDLALP-----EQAAVLDLGTGTGAIALALASERNGWQIC 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+   A+++A+ N     ++       SDWF+++    FD+IVSNPPYIE+       
Sbjct: 138 AVDLQQSAVDLAERNRQRYQLN-NVRLFASDWFAAIPVQRFDLIVSNPPYIEANDPHLTQ 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R +      +L   G   +E G++Q   V  + E    
Sbjct: 197 GDVR-FEPASALVSGDDGLDDLRLVCSQSVDYLADGGWLLLEHGFDQGAAVRELLERAGF 255

Query: 245 FLVNAFKDYGGNDRVLLFC 263
            LV    D  G +R+ L C
Sbjct: 256 TLVETRSDLNGCERITLGC 274


>gi|218893761|ref|YP_002442630.1| putative methyl transferase [Pseudomonas aeruginosa LESB58]
 gi|254238596|ref|ZP_04931919.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719]
 gi|126170527|gb|EAZ56038.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719]
 gi|218773989|emb|CAW29804.1| probable methyl transferase [Pseudomonas aeruginosa LESB58]
          Length = 276

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +   P+ ++         + I R    E +  ILG + F+++ L
Sbjct: 22  DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +   
Sbjct: 82  EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +       
Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   R I     +HL  +G   +E GY+Q   V  +  +R  
Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGARGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V+  +D GGN+R+ L
Sbjct: 255 AGVHTLRDLGGNERITL 271


>gi|70732475|ref|YP_262237.1| hemK protein [Pseudomonas fluorescens Pf-5]
 gi|68346774|gb|AAY94380.1| hemK protein [Pseudomonas fluorescens Pf-5]
          Length = 276

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 124/240 (51%), Gaps = 8/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++        T+ + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PERIVPSEAALVFTDYLQRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L              +LDLGTG+GA+ LAL  E P ++   VD   +A+ +A+ N     
Sbjct: 102 LELL-----PATPATVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVALAERNRQRLQ 156

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +    L S WFSS+E   FD+I+SNPPYI       +  +VR F+P  +L  G DGL 
Sbjct: 157 L-DNVSVLSSHWFSSIESRRFDLIISNPPYIAEADPHLVAGDVR-FEPESALVAGKDGLD 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I     +HL   G   +E GY+Q   V  +  ++    V++  D GG++R+ L CR
Sbjct: 215 DLRLIVTQAPQHLEAGGWLMLEHGYDQAAAVRELLAAQGFIEVHSRVDLGGHERISLGCR 274


>gi|330752434|emb|CBL87384.1| modification methylase HemK [uncultured Flavobacteria bacterium]
          Length = 273

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL  H+++++ D  +      +  N + R  KHE I  +L    F+ ++  ++SD   PR
Sbjct: 27  GLKPHELVLNYDKKVSSYDCDYFDNVLKRLKKHEPIQYVLEVAYFFGLKFFVNSDVLIPR 86

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE L    L + L  I++   ++ILD+GTG+  + +AL K+ P  K   +D+S  AL+
Sbjct: 87  PETEEL----LVWILKSIDRNKALKILDIGTGSACIAVALAKQFPNAKIYAMDVSADALK 142

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +AK+NA  N V+  F  +++D F +  +   FDVIVSNPPY+       +   V DF+P 
Sbjct: 143 VAKTNAKNNKVNINF--IEADIFRTKDLTSSFDVIVSNPPYVRQSEATEMASNVLDFEPA 200

Query: 194 ISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++L       L  Y  I   + ++L+  G C +EI      ++  +F+ +        KD
Sbjct: 201 LALFVNDNQPLMFYNAILKILLKNLSSGGFCFLEINEAFGSEIQALFDLKNFQNQQLKKD 260

Query: 253 YGGNDRVL 260
             G DR+ 
Sbjct: 261 TFGKDRMF 268


>gi|320637364|gb|EFX07171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
          Length = 277

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL +E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALARERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWF ++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFRALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|72383531|ref|YP_292886.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
 gi|72003381|gb|AAZ59183.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
          Length = 273

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 15/213 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   V L +S++   PR ETE L+D AL     +I   D  R  DLGTG+GA+ ++L 
Sbjct: 69  WRD---VELEVSAEALIPRQETEFLIDIALK----KIINFDSGRWADLGTGSGAIAVSLA 121

Query: 117 KESPFFKGVGVDISCKALEIAKSN--AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           K  P + G   DIS +ALE+AK N  A+    + RF     DW+  ++   G FD+++SN
Sbjct: 122 KSLPNWNGYATDISNEALELAKRNLKAIVPNANVRFSL--GDWWEPLKRWRGRFDLVLSN 179

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI S +V+ L   V++ +P I+LDGG DG++  R I  G    L K G   +E  Y+Q
Sbjct: 180 PPYIPSYLVEELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQ 239

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +    ++  +  V+  KD  G  R  + CR
Sbjct: 240 SEKITSFMKNIGMEEVSFEKDLSGIKRYAI-CR 271


>gi|124025122|ref|YP_001014238.1| putative protein methyltransferase [Prochlorococcus marinus str.
           NATL1A]
 gi|123960190|gb|ABM74973.1| putative protein methyltransferase [Prochlorococcus marinus str.
           NATL1A]
          Length = 273

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 15/213 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   V L +S++   PR ETE L+D AL     +I   D  R  DLGTG+GA+ ++L 
Sbjct: 69  WRD---VELEVSAEALIPRQETEFLIDIALK----KITNFDSGRWADLGTGSGAIAVSLA 121

Query: 117 KESPFFKGVGVDISCKALEIAKSN--AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           K  P + G  VDIS +ALE+AK N  A+    + RF     DW+  ++   G FD+++SN
Sbjct: 122 KSLPNWNGHAVDISNEALELAKRNLKAIVPNANVRFSL--GDWWEPLKRWRGRFDLVLSN 179

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI S +V+ L   V++ +P I+LDGG DG++  R I  G    L K G   +E  Y+Q
Sbjct: 180 PPYIPSDLVEELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQ 239

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +     +  +  V+  KD  G  R  + CR
Sbjct: 240 SEKITSFMRNIGMEEVSFEKDISGIKRYAI-CR 271


>gi|254995297|ref|ZP_05277487.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Mississippi]
          Length = 285

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 8/228 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQ--RFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+     +  G+S+  ++VD D  ++  +  RFF    + R L  E +  ILG R+F+ +
Sbjct: 28  DAELIAQQALGISAIAMLVDADMPVEQERADRFFAL--LDRRLSGEPVSHILGKREFWGM 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++SD  +PR +TE +V SA+   + + + R++  I DLGTGTG + +ALL       
Sbjct: 86  DFAVNSDVLDPRADTESVVSSAI--KIYKNQNRNLT-IADLGTGTGCILIALLSHYRQAT 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  L
Sbjct: 143 GVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPGL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             EVR  +P  +LDGG  G+  Y  I   + + L   G   +EIG +Q
Sbjct: 202 QREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQ 249


>gi|107099669|ref|ZP_01363587.1| hypothetical protein PaerPA_01000687 [Pseudomonas aeruginosa PACS2]
          Length = 276

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +   P+ ++         + I R    E +  ILG + F+++ L
Sbjct: 22  DTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWSLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +   
Sbjct: 82  EVAPHTLIPRPDTELLVETALATL-----AADTATVLDLGTGTGAIALALASERPLWTVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +       
Sbjct: 137 AVDRVEEAVALAERNR-QRLLLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPHLSE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   R I     +HL  +G   +E GY+Q   V  +  +R  
Sbjct: 196 GDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGARGF 254

Query: 245 FLVNAFKDYGGNDRVLL 261
             V+  +D GGN+R+ L
Sbjct: 255 AGVHTLRDLGGNERITL 271


>gi|148994242|ref|ZP_01823535.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68]
 gi|148998843|ref|ZP_01826279.1| HemK protein [Streptococcus pneumoniae SP11-BS70]
 gi|168488842|ref|ZP_02713041.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae SP195]
 gi|168494450|ref|ZP_02718593.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC3059-06]
 gi|221231774|ref|YP_002510926.1| methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854522|ref|YP_002736034.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae JJA]
 gi|225861004|ref|YP_002742513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230459|ref|ZP_06964140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255329|ref|ZP_06978915.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502959|ref|YP_003724899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067802|ref|YP_003876768.1| methylase of polypeptide chain release factors [Streptococcus
           pneumoniae AP200]
 gi|147755270|gb|EDK62321.1| HemK protein [Streptococcus pneumoniae SP11-BS70]
 gi|147927383|gb|EDK78414.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68]
 gi|183572386|gb|EDT92914.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae SP195]
 gi|183575598|gb|EDT96126.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC3059-06]
 gi|220674234|emb|CAR68769.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225724246|gb|ACO20099.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae JJA]
 gi|225727908|gb|ACO23759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238554|gb|ADI69685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|301794157|emb|CBW36567.1| putative methyltransferase [Streptococcus pneumoniae INV104]
 gi|306409339|gb|ADM84766.1| Methylase of polypeptide chain release factors [Streptococcus
           pneumoniae AP200]
 gi|327389395|gb|EGE87740.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA04375]
 gi|332073353|gb|EGI83832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA17570]
 gi|332075369|gb|EGI85838.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA41301]
 gi|332201492|gb|EGJ15562.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA47368]
          Length = 279

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 12/237 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASDQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F  RK      V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELF--RKHLPEKKVRTLKDQFGQNRMVV 273


>gi|33860876|ref|NP_892437.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633818|emb|CAE18777.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 289

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 9/202 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR   N++L +S+    PRPETEL++D        + EK   +  +DLGTG+GA+ +AL 
Sbjct: 84  WR---NLKLEVSNRVLIPRPETELIIDIISGIFKNKEEK---ITFVDLGTGSGAISIALA 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173
            E+P + G+  DI   A++IA  N  T            +W+    + +G  D  VSNPP
Sbjct: 138 LENPNWNGIATDIDKNAIKIASRNFATYSNQSNLKFYNGNWWDPLKNFKGEIDFAVSNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI     + L +EV++F+P+++L GG +GL H   I      +L   G   +E  ++Q  
Sbjct: 198 YIPQDTYEVLPIEVKNFEPKLALLGGQEGLDHINQIVQNAPLYLKNKGWLLIENHFDQGE 257

Query: 234 DVVRIFESRKLFLVNAFKDYGG 255
            V ++F   +   V   KD+ G
Sbjct: 258 KVKKLFLENRFTSVKVLKDFSG 279


>gi|293433528|ref|ZP_06661956.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|291324347|gb|EFE63769.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
          Length = 277

 Score =  119 bits (297), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ + + NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLTQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|331682701|ref|ZP_08383320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H299]
 gi|331080332|gb|EGI51511.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H299]
          Length = 277

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALACERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDDQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|221068958|ref|ZP_03545063.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
 gi|220713981|gb|EED69349.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
          Length = 291

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 12/242 (4%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           D D++  ++Q+ +     +R  +   +  + G ++FY + L + S   +PRP+TE LVD 
Sbjct: 56  DSDALSQEQQQRWGQLCALRQ-QGMPVAYLTGSKEFYGLDLAVDSRVLDPRPDTETLVDW 114

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL      I +   VR++DLGTG+GA+ LAL  + P  + + VD S  AL +A+SNA   
Sbjct: 115 ALEL----IPEGQPVRVVDLGTGSGAIALALQSQRPSARVIAVDASADALAVARSNAARL 170

Query: 145 GVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  +       W   ++GL   D+IVSNPPYI +   D   L     +P  +L  G DG
Sbjct: 171 QLPVQL--AHGSWLEPLDGLEPVDLIVSNPPYIRA---DDPHLAALTHEPLSALASGADG 225

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L   R+I D     L   G    E G++Q  DV R+ ++     V    D  G  R    
Sbjct: 226 LEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVARLMQAAGFEQVQHRHDLAGIARCTGA 285

Query: 263 CR 264
           CR
Sbjct: 286 CR 287


>gi|148988473|ref|ZP_01819920.1| HemK protein [Streptococcus pneumoniae SP6-BS73]
 gi|147926154|gb|EDK77228.1| HemK protein [Streptococcus pneumoniae SP6-BS73]
          Length = 279

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +ALE+A  NA    ++
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALELASENASNQNLN 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P +++    DGL+ Y 
Sbjct: 161 IFFK--KSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLAIFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|313896051|ref|ZP_07829605.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975476|gb|EFR40937.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 295

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G     + V  D  L+  +     + +     H  +  +LG R+F  +  
Sbjct: 31  DAEVLLAAVLGKDRMYLYVHFDEPLEPAELSTFRSYVKERGAHTPMAYVLGRREFMGLEF 90

Query: 66  TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--F 122
            ++ DT  PRP+TE+LV +A+ F    R    D + I DLGTGTGA+ L++L  +     
Sbjct: 91  CVTRDTLIPRPDTEILVQTAVDFLRARRAAGADAMSIADLGTGTGAIALSVLYHADVSDL 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VDIS  A  +A+ NA   G++ER    + D  + + G  +D+IVSNPPYI +  + 
Sbjct: 151 RADAVDISPGAAAVARENAAQLGLAERCSVREGDLLAPLAGRTYDMIVSNPPYIPAGDIA 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR ++P ++LDGG DGL  YR +       L + G  +VE+G  Q  DV  + E 
Sbjct: 211 ELMTDVRAYEPHLALDGGADGLDFYRRMMADAPAMLKEGGAIAVEVGIGQAADVAALAER 270

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
             ++      KD  G +RV+
Sbjct: 271 HPRIVRTETKKDLAGIERVV 290


>gi|254557154|ref|YP_003063571.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           JDM1]
 gi|254046081|gb|ACT62874.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           JDM1]
          Length = 288

 Score =  118 bits (296), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
             I R +  E +  +LG   FY + L +      PR ETE LVD    + L  +     V
Sbjct: 63  QGIDRVVAGEPVQYVLGDAPFYGLTLQVDPAVLIPRVETEELVD----WILTDVPATAPV 118

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG+GA+ LA+  E P ++    DIS  AL++AK+NA  + +      + SD  +
Sbjct: 119 RLLDVGTGSGAIALAIKHERPAWEITASDISTAALQVAKANA--DRLHLDVKLVHSDLLT 176

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           SV    FD+IVSNPPYI +   D +   V   +P+ +L    DGL+ Y  +A  V+ HL 
Sbjct: 177 SVSAQPFDIIVSNPPYIAASEKDVMDASVLAHEPQTALFADHDGLALYEQLATTVADHLT 236

Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
             G   +E GY+Q   +  +F +S     V   +D  G+DR+L
Sbjct: 237 STGRLYLEFGYHQGPALQTLFAQSMPDATVTLRQDMAGHDRML 279


>gi|194434244|ref|ZP_03066510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1012]
 gi|194417475|gb|EDX33578.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1012]
 gi|332092252|gb|EGI97329.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii 5216-82]
 gi|332098227|gb|EGJ03200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 155-74]
          Length = 277

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     V+   ++ L D Q   L   + R    E +  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|95929012|ref|ZP_01311757.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM
           684]
 gi|95134913|gb|EAT16567.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM
           684]
          Length = 293

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 2/234 (0%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L  ++   +   + R  K E +  I+G  +F+++   ++     PR +TE+LV+ AL
Sbjct: 50  DQPLQPQELTKIRQLVARRAKREPLQYIVGHTEFWSLPFKVAPGVLIPRGDTEILVEEAL 109

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                    +  V  LD+GTG+GA+ +AL    P  +   VD+  +AL  A++NA  NGV
Sbjct: 110 RLLEDNTTSQQPV--LDVGTGSGAIAVALAHSCPDLQVEAVDLQPEALAQAQANAELNGV 167

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +ER    Q D      G + ++VSNPPYI    +D L  EVR+ +P ++L  G DGL  Y
Sbjct: 168 AERLSFRQQDMAVLSGGPYRLVVSNPPYIREDEMDGLMPEVREHEPAVALQAGSDGLDCY 227

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           R + +     L   G   VE+G  Q  DV  +     L      +DY G  RV+
Sbjct: 228 RLLCEQALNLLIPGGWLLVEVGAGQADDVAALMVRHGLPETFQREDYNGIVRVV 281


>gi|167745422|ref|ZP_02417549.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662]
 gi|167655143|gb|EDR99272.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662]
          Length = 278

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G +DF      ++ D   PR +TE ++++ +  + P         ILD+ TG+G 
Sbjct: 72  LQYLIGTQDFMGYTFRVTPDVLIPRQDTESVIEAVVEGNYPH------ESILDVCTGSGC 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++L         +G DI  KAL+IAK N        +F   +SD FS V+G FD+I+S
Sbjct: 126 IAISLCLMLKPDVCIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIIS 183

Query: 171 NPPYIESVIVDCLGL--EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPYI +   DC+ L  EV+D +P ++LDG  DGL  YR +A    +HLN  G    EIG
Sbjct: 184 NPPYIPTK--DCMELMPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIG 241

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Y+Q   V  + E      V   KD  G DR+++
Sbjct: 242 YDQGAAVKTMMEEAGFSSVEIKKDLAGLDRMVI 274


>gi|311279354|ref|YP_003941585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterobacter cloacae SCF1]
 gi|308748549|gb|ADO48301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterobacter cloacae SCF1]
          Length = 278

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG S   ++   ++ L   Q   L   + R  + E +  ++G R+F+++ 
Sbjct: 22  RDAEILLGHVTGKSRTFILAFDETPLSAEQLDALAGLLARRARGEPVAHLVGMREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA    R+      RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA----RLGDAP-GRILDLGTGTGAIALALASERPDCQL 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+   A+ +A+ N    GV+     LQS WFS+++G  FD+IVSNPPYI+       
Sbjct: 137 TAVDVVADAVALARRNVAHLGVNN-VQVLQSSWFSALDGQRFDMIVSNPPYIDEQDPHLA 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L     GL+    I      +L+  G   +E G+ Q   V  +F    
Sbjct: 196 QGDVR-FEPKTALVAADAGLADLAHIIAQGRCYLSAGGWMLLEHGWQQGAAVRALFADAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYGGN+R+ L
Sbjct: 255 YREVETCRDYGGNERLTL 272


>gi|255280025|ref|ZP_05344580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bryantella formatexigens DSM 14469]
 gi|255269116|gb|EET62321.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bryantella formatexigens DSM 14469]
          Length = 307

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 110/221 (49%), Gaps = 13/221 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVV 99
           I R  +H  +  + G ++F      ++S    PR +TELLV  A        EKR     
Sbjct: 93  IGRRAQHVPVQYLTGVQEFMGYPFRVNSQVLIPRQDTELLVLEA--------EKRIHPGA 144

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+ TG+G + ++L K +        DIS  AL +A+ NA    V   F  ++SD F 
Sbjct: 145 RVLDMCTGSGCIIISLAKRN-HICAAAADISEGALAVARENAGALQVEAEF--IKSDLFE 201

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++ G +D IVSNPPYI S  +  L  EVRD++PR +LDG  DGL  YR I     + L  
Sbjct: 202 NIAGTYDCIVSNPPYIASGEIPGLMPEVRDYEPRTALDGKADGLYFYRRIVAQAKQFLKP 261

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G    EIG +Q   V  +FE      +   KD  G  RV+
Sbjct: 262 QGWLLCEIGCDQGAAVAALFEQEGYREIEVKKDLAGLFRVV 302


>gi|59802323|ref|YP_209035.1| hypothetical protein NGO2015 [Neisseria gonorrhoeae FA 1090]
 gi|59719218|gb|AAW90623.1| putative protoporphyrinogen oxidase [Neisseria gonorrhoeae FA 1090]
          Length = 285

 Score =  118 bits (296), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 66  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 119

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 120 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 177

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 178 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 236

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 237 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 277


>gi|331701219|ref|YP_004398178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128562|gb|AEB73115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus buchneri NRRL B-30929]
          Length = 282

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 7/232 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L ++  +S+  +++   + +  +Q     +AI + LK      ++G  DFY + L ++ 
Sbjct: 34  LLEKLFKMSAADLLIHYHTQMPVKQWRVFQDAIGQLLKGVPPQYVVGEADFYGLSLKVTP 93

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ETE LVD  LA +         +++LD+GTG+GA+ +AL    P ++    DI
Sbjct: 94  AVLIPRVETEELVDWILADN-----SDSKLKVLDIGTGSGAIAIALKHARPHWQVFASDI 148

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S  A+++A+ NA+ N  +  F  + SD F++++  FDVIVSNPPYI       +   V  
Sbjct: 149 SLPAIKVARQNAIANHTAIHF--MVSDVFAAIDESFDVIVSNPPYIAKDEQSYMDASVIK 206

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +P ++L     GL+ Y+ IA     HL   G   +EIG+ Q+  V  IF++
Sbjct: 207 SEPDLALYAKDQGLAIYKQIAADAESHLTSKGRLYLEIGFQQQSAVTEIFQA 258


>gi|194099711|ref|YP_002002846.1| HemK [Neisseria gonorrhoeae NCCP11945]
 gi|254492740|ref|ZP_05105911.1| hemK protein [Neisseria gonorrhoeae 1291]
 gi|268597897|ref|ZP_06132064.1| hemK protein [Neisseria gonorrhoeae FA19]
 gi|268600147|ref|ZP_06134314.1| hemK protein [Neisseria gonorrhoeae MS11]
 gi|268602560|ref|ZP_06136727.1| hemK protein [Neisseria gonorrhoeae PID1]
 gi|268681109|ref|ZP_06147971.1| hemK protein [Neisseria gonorrhoeae PID332]
 gi|268685212|ref|ZP_06152074.1| hemK protein [Neisseria gonorrhoeae SK-92-679]
 gi|268685589|ref|ZP_06152451.1| hemK protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291044872|ref|ZP_06570581.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2]
 gi|293397950|ref|ZP_06642156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria gonorrhoeae F62]
 gi|193935001|gb|ACF30825.1| HemK [Neisseria gonorrhoeae NCCP11945]
 gi|226511780|gb|EEH61125.1| hemK protein [Neisseria gonorrhoeae 1291]
 gi|268551685|gb|EEZ46704.1| hemK protein [Neisseria gonorrhoeae FA19]
 gi|268584278|gb|EEZ48954.1| hemK protein [Neisseria gonorrhoeae MS11]
 gi|268586691|gb|EEZ51367.1| hemK protein [Neisseria gonorrhoeae PID1]
 gi|268621393|gb|EEZ53793.1| hemK protein [Neisseria gonorrhoeae PID332]
 gi|268625496|gb|EEZ57896.1| hemK protein [Neisseria gonorrhoeae SK-92-679]
 gi|268625873|gb|EEZ58273.1| hemK protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291011766|gb|EFE03762.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2]
 gi|291611896|gb|EFF40965.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria gonorrhoeae F62]
          Length = 295

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 76  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 129

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 130 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 187

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 188 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 246

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 247 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 287


>gi|256830554|ref|YP_003159282.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM
           4028]
 gi|256579730|gb|ACU90866.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM
           4028]
          Length = 280

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  + G+    +++D  + +D+  R  +    VR +K E +  ++G ++FY     
Sbjct: 27  AQVLLAHILGMERLDMLLDVGAPVDEPCRLRMDELGVRRMKGEPVAYLVGEKEFYGFTFR 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETEL++D  L      ++    +++LD+GTG+GA+ ++     P+     
Sbjct: 87  VGPGVLIPRPETELILDHLLE----SLDTNARLQVLDIGTGSGALAVSCANLFPYSCVAA 142

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185
           VDIS +AL++A  NA+ + V +R   LQ D   S+    FDV+++N PY+       L  
Sbjct: 143 VDISFEALKVACKNALLHDVQDRIVFLQGDLLESLRIDSFDVVLANLPYVPLTTKKTLSR 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV   +P  +L  G+DGL  YR +A  +S  +    L   EI ++Q + V+ +F      
Sbjct: 203 EVLCHEPHSALFSGLDGLDCYRALARSLSGAMKPGALLLCEIDHSQGLAVIDLFSGIAQN 262

Query: 246 LVNAFKDYGGNDRV 259
            V   KDY G DR+
Sbjct: 263 -VRILKDYAGLDRL 275


>gi|320181781|gb|EFW56691.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii ATCC 9905]
          Length = 277

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     V+   ++ L D Q   L   + R    E +  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL   LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALE-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 TAVDRMPDAVALAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F    
Sbjct: 196 QGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAG 254

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +DYG N+RV L
Sbjct: 255 YHDVETCRDYGDNERVTL 272


>gi|27904664|ref|NP_777790.1| hypothetical protein bbp162 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|32129595|sp|Q89AT0|HEMK_BUCBP RecName: Full=Protein methyltransferase hemK homolog
 gi|27904061|gb|AAO26895.1| HemK [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
          Length = 277

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 129/248 (52%), Gaps = 12/248 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           CR   +S+  + +  D+++D      L   + R +  E I  ++  ++F+++   +S+ T
Sbjct: 36  CRTWIISNDFIKLTYDNLID------LNVLLQRRMNSEPISYLIHVKEFWSLPFLVSNST 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRP+TE+LV+ AL +    ++     ++LDLGTG G++ LAL  E    K +G+D   
Sbjct: 90  LIPRPDTEILVEKALIY----LKNLSNAKVLDLGTGCGSIALALASERLDCKIIGIDCVK 145

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +++ IA  NA    + +    L S WFS V+ +FD+IVSNPPY+    +  +  EV  F+
Sbjct: 146 ESISIASKNAKILKL-KNVSFLHSIWFSKVDNMFDMIVSNPPYLSFSEMKNVDKEVL-FE 203

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P I+L    +GL   R I     ++L       VE G+ QK  V   F       +N ++
Sbjct: 204 PFIALFSSENGLGAIRHIIKYSKKYLYSKAWLLVEHGWKQKDKVQSFFYKYSFININTYR 263

Query: 252 DYGGNDRV 259
           DY  +DRV
Sbjct: 264 DYCDSDRV 271


>gi|320546677|ref|ZP_08040989.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus
           ATCC 9812]
 gi|320448732|gb|EFW89463.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus
           ATCC 9812]
          Length = 276

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 15/230 (6%)

Query: 38  LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L   I+  LK H S   I G   F ++ L +      PRPETE LVD      L    K 
Sbjct: 54  LIEDIMSQLKEHRSPQYITGKAYFRDLELDVDERVLIPRPETEELVD----LVLKENSKA 109

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D+ +ILD+GTG+GA+ ++L    P +     DIS +AL++AK N+    VS   D ++SD
Sbjct: 110 DL-QILDIGTGSGAIAISLKSARPDWHVTASDISSEALQLAKENSERKQVS--LDFIESD 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F+ + G FDVI+SNPPYI       +G+ V   +P ++L    DG + YR I +G + H
Sbjct: 167 VFNQISGKFDVIISNPPYIAYDDEGEVGVNVLASEPHLALFADEDGFAIYRRIIEGANSH 226

Query: 217 LNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLF 262
           L ++G    EIGY Q   + R+    F  ++   V   +D  G DR+++ 
Sbjct: 227 LTENGKLYFEIGYKQGDGMRRLLAQHFPEKR---VRVLQDVFGKDRMVVM 273


>gi|329904247|ref|ZP_08273722.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548071|gb|EGF32800.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 278

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 10/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  ++I   + +L   Q   ++    R +  E I  ++G R+FY +R  ++ 
Sbjct: 27  LLGHALGLTRIELITGNEQMLTPAQAQRVSALFERRIAGEPIAYLVGTREFYGLRFEVTP 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETELLV+ A+   LPR       R+LD+GTG+GA+ +AL           +D 
Sbjct: 87  AVLIPRPETELLVELAID-RLPRQG-----RVLDMGTGSGAIAVALANSRRDAAVSAIDF 140

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A+ NA  + V       +SDW++++EG  FD+IV+NPPYI          ++R
Sbjct: 141 SDAALAVARRNAAHHAVQVHLQ--RSDWYAALEGQCFDMIVANPPYIVEGDHHLSEGDLR 198

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P  +L    DGLS  R I  G +  L   G   +E GY+Q   V  + ++ +   V 
Sbjct: 199 -FEPVDALTDHADGLSALRQIVSGATAALAPAGWLLMEHGYDQAAAVCALLDAAQFTDVQ 257

Query: 249 AFKDYGGNDRV 259
           ++ D  G  RV
Sbjct: 258 SWPDLAGIARV 268


>gi|240015595|ref|ZP_04722135.1| HemK [Neisseria gonorrhoeae FA6140]
 gi|240114685|ref|ZP_04728747.1| HemK [Neisseria gonorrhoeae PID18]
 gi|268600328|ref|ZP_06134495.1| hemK protein [Neisseria gonorrhoeae PID18]
 gi|268584459|gb|EEZ49135.1| hemK protein [Neisseria gonorrhoeae PID18]
          Length = 301

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 82  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 135

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 136 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 193

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 194 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 252

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 253 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 293


>gi|253702391|ref|YP_003023580.1| modification methylase, HemK family [Geobacter sp. M21]
 gi|251777241|gb|ACT19822.1| modification methylase, HemK family [Geobacter sp. M21]
          Length = 285

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 11/238 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC    L    + ++ D  L D +       + R  + E +  ILG ++F  +  
Sbjct: 32  EAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFMGLEF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124
            ++     PR +TE+LV  A       +++    R ILD+GTG+G V +A+ K  P  + 
Sbjct: 92  RVTPAVLIPRHDTEVLVTEA-------VKRGGACRSILDIGTGSGCVAIAVAKALPEAEV 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+S +A+E+A+ NA  NGVS +F   Q   F    G  FD++VSNPPYI S  +  L
Sbjct: 145 CTVDVSGEAIEVARGNAERNGVSVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADLASL 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             EVRDF+P  +LDGG DGL  YR I  G   HLN  G    E+G  Q  +V+ +  S
Sbjct: 203 QQEVRDFEPAGALDGGGDGLDFYRRITAGAPAHLNPGGWLLFEVGAGQAGEVLELLNS 260


>gi|170696250|ref|ZP_02887382.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia graminis C4D1M]
 gi|170138810|gb|EDT07006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia graminis C4D1M]
          Length = 288

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 134/266 (50%), Gaps = 23/266 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D  LD    +R+    A  R +  E I +I+G R+F+ +
Sbjct: 28  EARILLTHVLGWRHTQLITRADEALDSECVERYLALQA--RRVAGEPIAQIVGVREFFGL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              ++     PRPETELLV++AL    +LPR       R+LDLGTGTGA+ +A+    P 
Sbjct: 86  EFEVTPHVLIPRPETELLVETALTAMENLPR------PRVLDLGTGTGAIAVAIASMRPD 139

Query: 122 FKGVGVDISCKALEIAKS------NAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPP 173
            +   +D S +AL +A        +A   G +  F   QSDW+ S++    FDVIVSNPP
Sbjct: 140 AQVTALDRSAEALAVAARNAARLLDAKRAGGAVTF--AQSDWYGSLDTALRFDVIVSNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S        ++R ++PR +L    DGLS  R I  G    L   G+  +E GYNQ  
Sbjct: 198 YIASGDPHLEQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLAARGVLWMEHGYNQAE 256

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259
            V  +  ++    V + +D  G +R+
Sbjct: 257 AVRELLTAQGFVDVRSERDLAGIERI 282


>gi|240013153|ref|ZP_04720066.1| HemK [Neisseria gonorrhoeae DGI18]
 gi|240081797|ref|ZP_04726340.1| HemK [Neisseria gonorrhoeae FA19]
 gi|240114077|ref|ZP_04728567.1| HemK [Neisseria gonorrhoeae MS11]
 gi|240116887|ref|ZP_04730949.1| HemK [Neisseria gonorrhoeae PID1]
 gi|240120224|ref|ZP_04733186.1| HemK [Neisseria gonorrhoeae PID24-1]
 gi|240122522|ref|ZP_04735478.1| HemK [Neisseria gonorrhoeae PID332]
 gi|240126630|ref|ZP_04739516.1| HemK [Neisseria gonorrhoeae SK-92-679]
 gi|240127232|ref|ZP_04739893.1| HemK [Neisseria gonorrhoeae SK-93-1035]
 gi|260441507|ref|ZP_05795323.1| HemK [Neisseria gonorrhoeae DGI2]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTL 265


>gi|332366922|gb|EGJ44663.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1059]
          Length = 276

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         V +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA + G++  F  ++SD   +++  F
Sbjct: 118 TGSGAIALALANNRPDWQITASDLSEDALALATENAQSCGLNLTF--VRSDCLDAIQEKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEEDKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELL--KKSFPKKRIRVLKDQFGKDRMV 271


>gi|317473031|ref|ZP_07932331.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp.
           3_2_56FAA]
 gi|316899460|gb|EFV21474.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp.
           3_2_56FAA]
          Length = 291

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 12/213 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G +DF      ++ D   PR +TE ++++ +  + P         ILD+ TG+G 
Sbjct: 85  LQYLIGTQDFMGYTFRVTPDVLIPRQDTESVIEAVVEGNYPH------ESILDVCTGSGC 138

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++L         +G DI  KAL+IAK N        +F   +SD FS V+G FD+I+S
Sbjct: 139 IAISLCLMLKPDVCIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIIS 196

Query: 171 NPPYIESVIVDCLGL--EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPYI +   DC+ L  EV+D +P ++LDG  DGL  YR +A    +HLN  G    EIG
Sbjct: 197 NPPYIPTK--DCMELMPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIG 254

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Y+Q   V  + E      V   KD  G DR+++
Sbjct: 255 YDQGAAVKTMMEEAGFSSVEIKKDLAGLDRMVI 287


>gi|53804791|ref|YP_113525.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
 gi|53758552|gb|AAU92843.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
          Length = 284

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 12/258 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L  V G +   +   P+ +L  D +R FL +   R+ +   +  + G R+F++  
Sbjct: 26  DAEVLLAHVIGKNRAYLRAWPERLLQADEERRFLASIAARA-RGVPVAYLTGVREFWSRS 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +  D   PRPETELLV+ A+  +     +R+  RILDLGTG+G + + L  E P  + 
Sbjct: 85  FKVCPDVLIPRPETELLVELAVEAAC----RRNRPRILDLGTGSGVIAVTLALECPDAEV 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
             VD+S  AL +A+ NA   G    RF  L+ DWF+ +     FD+IVSNPPY+      
Sbjct: 141 WAVDVSESALAVARHNAAALGAKTVRF--LRGDWFAPLPADIRFDLIVSNPPYVSPSDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  ++R ++PR +L    DGL     IAD     L  DG   +E G++Q   V RI   
Sbjct: 199 LLRGDLR-YEPRQALVSVKDGLHDIALIADNAGPRLLPDGGLMIEHGFDQADAVARILGK 257

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V   +D  G++RV
Sbjct: 258 AGYRDVRHHRDLQGHERV 275


>gi|15605689|ref|NP_213065.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5]
 gi|6225500|sp|O66506|HEMK_AQUAE RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.AaoHemKP
 gi|2982836|gb|AAC06458.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5]
          Length = 281

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 110/192 (57%), Gaps = 7/192 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE+L++  L   +P  + R++V   +LG+GTG + + LL E P       D++  A
Sbjct: 94  PRPETEILIERTLEL-IP--QDREMVG-FELGSGTGCISINLLIERPKLVMYATDVNPDA 149

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +E+ K NA  + V +R      + F  V+G+ FD IVSNPPYI     + L  EV+  + 
Sbjct: 150 VELTKENAKLHKVDDRLFVFLGNAFEPVKGMKFDFIVSNPPYIPENFWEILPEEVKK-EG 208

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             SL GG  G   Y  IA+  ++HL ++G  ++EIG++Q   VV+    +K F VN FKD
Sbjct: 209 YTSLIGGKKGWEFYELIAEEGTKHLKENGFIALEIGHDQG-KVVKELLEKKCFKVNIFKD 267

Query: 253 YGGNDRVLLFCR 264
           Y G DRV++  R
Sbjct: 268 YAGFDRVVIAQR 279


>gi|307708640|ref|ZP_07645103.1| HemK protein [Streptococcus mitis NCTC 12261]
 gi|307615214|gb|EFN94424.1| HemK protein [Streptococcus mitis NCTC 12261]
          Length = 278

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H+    I+G  DFY ++L +      PRPETE LV+  LA + P         +LD+GTG
Sbjct: 65  HKPAQYIIGQADFYGMQLKVDERVLIPRPETEELVELILAEN-PETN----FSVLDIGTG 119

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+ LAL K    +     DIS +AL +A  NA    ++  F   +SD F+ +   +D+
Sbjct: 120 SGAIALALAKNRSAWSVTAADISQEALNLASENAKNQKLNIFFK--KSDCFAEISEKYDI 177

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       +GL V   +P ++L    DGL+ YR IA+  + +L   G   +EI
Sbjct: 178 IVSNPPYISREDESEVGLNVLHSEPHLALFADEDGLAIYRRIAEDATDYLKDGGKIYLEI 237

Query: 228 GYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
           GY Q   V  +F     E R    +   KD  G DR+++
Sbjct: 238 GYKQGQSVPELFRKHLPEKR----LRTLKDQFGQDRMVV 272


>gi|304311493|ref|YP_003811091.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
 gi|301797226|emb|CBL45446.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
          Length = 289

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 9/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       + +     L+  Q     + + R L+ E +  +LG ++F+++ L
Sbjct: 29  DAELLLCAVLERGRTWLRIHDGECLNAAQARAFDDWLERRLRGEPVAYLLGCQEFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV+ ALA +       +   +LDLGTGTGA+ LAL  E   +   
Sbjct: 89  KVAPCTLIPRPDTERLVEVALARA-----PENCTTVLDLGTGTGAIALALKHERRHWHVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D    A  +A  NA   G+S   + L+SDW +++ G  FD+IVSNPPYI+       G
Sbjct: 144 ATDRVEMAAALASENAQQLGLS--LEVLESDWLAALTGRRFDLIVSNPPYIDPHDPHLRG 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V  ++P  +L     GL   +TI +   +HL  +G+ ++E GY+Q   V R+      
Sbjct: 202 DGV-SYEPLSALVAEHGGLGDLKTIVEHAPQHLCAEGVLALEHGYDQAQAVGRLLLGAGF 260

Query: 245 FLVNAFKDYGGNDRV 259
             +    DYGG  RV
Sbjct: 261 DDIQTHHDYGGQVRV 275


>gi|322391879|ref|ZP_08065344.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris
           ATCC 700780]
 gi|321145359|gb|EFX40755.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris
           ATCC 700780]
          Length = 276

 Score =  118 bits (295), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 125/260 (48%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRV-TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S SF+ R+   LS    I      +   ++ F+ +   + + H     I+G  +FY + 
Sbjct: 22  ESLSFVYRILKNLSFTDFIFAIQQEITPEEKEFVESIYKQLVAHVPAQYIIGHAEFYGME 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +      PRPETE LV+  L  +         + +LD+GTG+GA+ LAL K  P +  
Sbjct: 82  LKVDERVLIPRPETEELVELILTEN-----PNPNLSVLDIGTGSGAIALALAKNRPDWCV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  AL +A  NA    +   F   +SD F  +   +D+IVSNPPYI       +G
Sbjct: 137 TASDISPDALNLASENAKLQDLKISFK--KSDCFEEITENYDIIVSNPPYISRADESEVG 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L V   +P ++L    DGL+ YR IA     HL + G   +EIGY Q   V  +F  RK 
Sbjct: 195 LNVLHSEPHLALFAEEDGLAIYRKIAQEAKHHLREGGEIYLEIGYKQGHSVPALF--RKY 252

Query: 245 FL---VNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272


>gi|86148711|ref|ZP_01066988.1| HemK protein [Vibrio sp. MED222]
 gi|85833504|gb|EAQ51685.1| HemK protein [Vibrio sp. MED222]
          Length = 290

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 127/272 (46%), Gaps = 25/272 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E       
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTYGKQGA-----ILDLGTGTGAIALALASEMSNRPVT 143

Query: 126 GVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPP 173
           G+D+  +A ++A  NA    +TN        L   WF  +  +        F +IVSNPP
Sbjct: 144 GIDLRPEAQQLATENAQRLNITNAT-----FLHGSWFEPLNSVNSEEKAVKFSLIVSNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YIE         +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q +
Sbjct: 199 YIEKNDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGL 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLL--FC 263
            V  I  +     V   KDYGGNDRV L  +C
Sbjct: 258 AVREIMLALGYLDVVTEKDYGGNDRVTLGRYC 289


>gi|313888255|ref|ZP_07821926.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845658|gb|EFR33048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 276

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 9/211 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  DFY     +      PR +TE+ V   L           +  +L++G GTG 
Sbjct: 70  LQYILGEEDFYGRTFKVIEGVLIPRQDTEISVKKILNIIENNQ----INNMLEIGCGTGI 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V +++  ES       VDIS KA+E  K N     ++ +   ++SD FS++   FD+I S
Sbjct: 126 VSISVDLESSV-DVTAVDISEKAIENTKINK--EKLNSKIKIIKSDLFSNINEKFDLIYS 182

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI+S  ++ L +EVRD++PR++LDGG DGL  YR+I       LN  G    EIGY+
Sbjct: 183 NPPYIKSKEIENLQVEVRDYEPRLALDGGEDGLFFYRSIIKSSPEFLNHKGFLVFEIGYD 242

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +  D+  + + +  F V  +KD    DRV++
Sbjct: 243 EAEDICNLMKDK--FEVEVYKDLNNLDRVVV 271


>gi|303247809|ref|ZP_07334078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio fructosovorans JJ]
 gi|302490893|gb|EFL50792.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio fructosovorans JJ]
          Length = 326

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL    +I+  D  L + +       + R  + E +  +LG R+FY +   
Sbjct: 69  AQLLLAHALGLDRLGLILAMDRPLIEAELDAYRPLVARRGQGEPVAYLLGEREFYGLSFA 128

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S DT  PRPETE +V+ AL              + DLGTG+G + + L  + P   GV 
Sbjct: 129 VSPDTLIPRPETEGIVEHALEL----FPGDGPGSLADLGTGSGCLAVTLAVKWPLATGVA 184

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
           +D S  AL +A+ NA  +GV  R D +++D F+++   +G + ++VSNPPY+ +      
Sbjct: 185 LDRSAGALTVARGNAARHGVDGRLDFVEAD-FAALPVRQGGYGLVVSNPPYVSAAEYRAC 243

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRDF+P+ +L  G  GL     +A      L   G   VEIG+ Q      +     
Sbjct: 244 SFEVRDFEPQGALVPGESGLEAVPVVARTAFDRLAPGGWLLVEIGWEQGPAAAAVLAEAG 303

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   +D  G+DRV+
Sbjct: 304 FADVAVRRDLAGHDRVV 320


>gi|71065791|ref|YP_264518.1| HemK family modification methylase [Psychrobacter arcticus 273-4]
 gi|71038776|gb|AAZ19084.1| probable modification methylase, HemK family [Psychrobacter
           arcticus 273-4]
          Length = 305

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 27/259 (10%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I D +  L D +       + +  +   +  + G + F+++  T++  T  PRP+TE+L
Sbjct: 47  LITDDNYQLSDSETERFNAGMTKMQQGTPLAYLTGTQAFWSLDFTVNEHTLIPRPDTEVL 106

Query: 82  VDSALAF-------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--------FKGVG 126
           V++ L +       + P ++    +R+LDLGTG+G + ++L  E           ++ V 
Sbjct: 107 VETVLDWIKSQPFSTTPTLKS---MRLLDLGTGSGCIAISLAHELKLADTLKQVSWQVVA 163

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDC 182
           VD S +AL+IA+ NAV+N V   F  + S W+  +    E LFDVIVSNPPYI+      
Sbjct: 164 VDFSLEALKIAQHNAVSNAVEVTF--VHSSWYDELPTQDEQLFDVIVSNPPYIDEADEHL 221

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            GL     +P  +L     GL+    I     ++L   GL ++E GY+Q   V ++F   
Sbjct: 222 AGLLA---EPISALSAPNHGLADIEHIVYYAPQYLKVGGLLAIEHGYDQGQAVRQLFADN 278

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KD+GGNDR+ L
Sbjct: 279 HFDNIRTIKDFGGNDRMTL 297


>gi|282857118|ref|ZP_06266364.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pyramidobacter piscolens W5455]
 gi|282585053|gb|EFB90375.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pyramidobacter piscolens W5455]
          Length = 286

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 115/236 (48%), Gaps = 9/236 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD+V        L+ A  R  K E +  ILG  DF  + L + +    PRPETELLV+ A
Sbjct: 49  PDAVPASVAEAALS-ACARRKKREPLQYILGCCDFDGLSLLVEAGCLVPRPETELLVECA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                   E  D    LD GTGTG + +ALL   P  + + V+ +  +L  A+ N    G
Sbjct: 108 -------AENFDGGAFLDWGTGTGCIAVALLNRFPAARALMVEKNPASLNCARRNLEKFG 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            S R   + S+    +      ++VSNPPY+ S  ++ L  EV  ++PR++LDGG DGL 
Sbjct: 161 FSPRARLIASETPEDIPACEVSLVVSNPPYVPSGEIERLMPEVSQYEPRLALDGGPDGLE 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            YR + +  +R L + G   VE G   + + +R    +        +D  G DRV+
Sbjct: 221 PYRRLFELCARVLRRGGFFCVEYGGGAQTEALRALAPKAFRETVLLRDIAGCDRVI 276


>gi|33866508|ref|NP_898067.1| protoporphyrinogen oxidase [Synechococcus sp. WH 8102]
 gi|33633286|emb|CAE08491.1| possible protoporphyrinogen oxidase [Synechococcus sp. WH 8102]
          Length = 296

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +S+    PR ETE+LVD     +L  I    + R  DLGTG+GA+ +AL 
Sbjct: 87  WRDL---ELAVSAAALIPRQETEVLVD----LALETIAGMSIERWADLGTGSGAIAVALS 139

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
           +  P   G  VD+S  AL +A++N         +   Q  W+  +E   G  D++V NPP
Sbjct: 140 RAMPATPGHAVDLSPNALALARTNLEALAPEGEWHLHQGRWWEPLEPWWGHIDLVVCNPP 199

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S ++  L   VRD +P ++L GGIDGL   R +  G  R L   G   +E  ++Q  
Sbjct: 200 YIPSDLILNLDPVVRDHEPHLALAGGIDGLQAIREVVAGACRALAPGGWILIEHHHDQSA 259

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + + +   L  + A +D  G +R  L  R
Sbjct: 260 PALNLLKQAGLSSIRAARDLEGVNRFALARR 290


>gi|325107094|ref|YP_004268162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Planctomyces brasiliensis DSM 5305]
 gi|324967362|gb|ADY58140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Planctomyces brasiliensis DSM 5305]
          Length = 309

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 12/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L         Q+  +  +V+ +  R  +   + R ++ E +  ++G ++FY++  
Sbjct: 48  ESEILLAHAQKCPRIQLYANYHTVVSEETRAQMRELVKRRVRREPVAYLVGHKEFYSLEF 107

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE L++  L    P +E+     IL+L TG+G + + L K  P  + +
Sbjct: 108 AVEPGVFIPRPETETLINQGLEKLTP-VER---PHILELCTGSGCIAVTLAKRLPKARVI 163

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182
            V+ +   L +++SNA  + V +R   L+ D F+ V      FD+IVSNPPYI S  +  
Sbjct: 164 AVEKNPIPLRVSRSNAEKHQVDDRVQILEGDLFAPVPTDGPRFDLIVSNPPYIRSDEIPG 223

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
           L  +VR+ +P  +LDGG DGL   R I     ++L   G   +E+   Q     D+ R  
Sbjct: 224 LVADVREHEPHAALDGGADGLDMIRVIIAQAPKYLKPGGWLMLEMDPAQIEATHDIAR-- 281

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           +SR+     A++D   ++R +
Sbjct: 282 QSRQWTTQQAYRDLFEDERCI 302


>gi|71278012|ref|YP_270225.1| HemK family modification methylase [Colwellia psychrerythraea 34H]
 gi|71143752|gb|AAZ24225.1| modification methylase, HemK family [Colwellia psychrerythraea 34H]
          Length = 285

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 7/255 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+  + ++        + R +  E I  I+G ++F+++  
Sbjct: 27  DAQILLCFVLDKERSYLLTWPEKEVTEQSEQQYLALLQRRIMGEPIAYIVGVQEFWSLPF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE+LV+      L    + D +  LDLGTGTGA+ LAL  E P ++  
Sbjct: 87  RVSPATLIPRPDTEVLVE----LVLEHFGELDTLHCLDLGTGTGAIALALASEQPNWQID 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            +D S  A+++AK NA    +S   +  QSDWF++V E  FDVIVSNPPYI+++      
Sbjct: 143 AIDFSLDAVKLAKQNAQDLHLS-HVNIFQSDWFNAVNERKFDVIVSNPPYIDALDKHLSQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR  +P  +L     GL   + IA    + LN  G    E G+ Q   V  I  +   
Sbjct: 202 GDVR-CEPESALVADEQGLGDIKHIAQQALKFLNTHGSLFFEHGFEQGQAVRNILTALGY 260

Query: 245 FLVNAFKDYGGNDRV 259
             V   +D+ G++R+
Sbjct: 261 DNVQTVRDFNGHERI 275


>gi|294142152|ref|YP_003558130.1| hemK family protein [Shewanella violacea DSS12]
 gi|293328621|dbj|BAJ03352.1| hemK family protein [Shewanella violacea DSS12]
          Length = 280

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 124/237 (52%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD  L   Q    T  + R +    I  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 46  PDERLASEQVVDYTKMVHRRVLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP  E     ++LDLGTGTGA+ L+L  E   ++   VD   +A+ +AK+N     
Sbjct: 106 L--NLPLAEN---AKVLDLGTGTGAIALSLAYEKSQWQITAVDKIIEAVALAKANRAHLK 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++ + ++SDWF SV    F++IVSNPPYI+         +VR F+P+ +L  G  G +
Sbjct: 161 L-QQVEIIKSDWFDSVTCYDFNLIVSNPPYIDETDAHLDQGDVR-FEPQSALTAGEAGFA 218

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA     +L   G   +E GY Q + + +         V   +D+G NDR  L
Sbjct: 219 DLYHIASSARDYLAPGGYLLLEHGYEQAIQLRKKMIELGYENVATVRDFGSNDRCTL 275


>gi|147679164|ref|YP_001213379.1| methylase of polypeptide chain release factors [Pelotomaculum
           thermopropionicum SI]
 gi|146275261|dbj|BAF61010.1| methylase of polypeptide chain release factors [Pelotomaculum
           thermopropionicum SI]
          Length = 300

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 18/264 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTGLS   +    + VL + +     + + R L  E +  + G ++F  +  
Sbjct: 38  DAEVLLAYVTGLSRAGLYRKKELVLTEEEEARFIDLVERRLAGEPVAYLTGHKEFMGLDF 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFF 122
            ++     PRPETEL+V++AL F LP         I D+GTG+GAV ++L   +KE+  +
Sbjct: 98  VVNRSVLIPRPETELMVETALKF-LP-----GAPVIADVGTGSGAVAVSLAFFVKEAVVY 151

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIES 177
                DIS +AL +A+ NA  +GV  R      D L+      + G  D+I +N PYI +
Sbjct: 152 ---ATDISREALAVARLNAARHGVEGRVHFCPGDLLEPLTGRVMPGSLDLIAANLPYIAT 208

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EVR F+P ++LDGG  GL+ YR +    +  L + G+  +EI   Q  ++  
Sbjct: 209 EDLPGLPREVRLFEPPVALDGGPGGLALYRRLIPAAAGFLKQGGIMLMEISPGQWAEMAG 268

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           + +  + +  +  KD  G DR++L
Sbjct: 269 LLQPPQ-WEASLLKDLAGLDRLVL 291


>gi|268592709|ref|ZP_06126930.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM
           1131]
 gi|291311852|gb|EFE52305.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM
           1131]
          Length = 277

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG S   +    ++ L   +       + R  K E I  I+G R+F++
Sbjct: 20  AKRDAEILLEHVTGRSRTYLFAFGETELKAEEFQQAELLLQRREKGEPIAYIIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE +V+ AL+    R+ ++   +ILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLYVSPATLIPRPDTECIVEQALS----RLTEQKN-QILDLGTGTGAIALALASEMQQS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           + +GVD +  A+ +A+ N     +S     +QS+WFSS+    FD+I+SNPPYI+   + 
Sbjct: 135 QVIGVDFNPDAVALAQRNQQRLNIS-NVKFIQSNWFSSLSIQQFDMIISNPPYIDENDMH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+    I     ++L   G   +E G+ Q + V  +F+ 
Sbjct: 194 LSEGDVR-FEPLTALVAKDEGLADLMHIIKESKKYLKNQGWLLLEHGWTQGLAVRDLFKV 252

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +    DYGG +R+ L
Sbjct: 253 HGYTKIETCLDYGGRERISL 272


>gi|163783633|ref|ZP_02178622.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881126|gb|EDP74641.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 270

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 105/209 (50%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G  DFY     +      PRPETELLV+  L      I     +   ++G GTG + +
Sbjct: 64  LIGEWDFYGRTFKVKEGVLIPRPETELLVEKTLEL----IPADKEMEGFEVGGGTGCISI 119

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
            LL E    +    D++  A+E+ K NA  +GV  R +  + D FS V+G  FD IVSNP
Sbjct: 120 TLLLERGLLRMAVDDVNPTAVELMKENAKIHGVDYRLEVFEGDMFSPVKGRRFDFIVSNP 179

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI     + L  EVR  + R +L GG  G   Y   A  V RHL   G  ++EIG++Q 
Sbjct: 180 PYIPENFWERLPPEVRR-EGREALIGGEKGYEFYERFAKEVPRHLKGGGFVALEIGHDQG 238

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             V  + +      V  +KDY G DRV++
Sbjct: 239 RVVEELLKGAGFERVIIYKDYSGQDRVVI 267


>gi|119357671|ref|YP_912315.1| HemK family modification methylase [Chlorobium phaeobacteroides DSM
           266]
 gi|119355020|gb|ABL65891.1| modification methylase, HemK family [Chlorobium phaeobacteroides
           DSM 266]
          Length = 301

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 11/226 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----V 99
           + L+ + +  I G + FY +   +      PRPETELLV+ AL F L  +   DV    +
Sbjct: 73  QRLEGKPVQYITGEQFFYGLPFFVDKRVLIPRPETELLVEHALEF-LGHVSAADVSEAAL 131

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+GTG+G + + L    P      +DIS +AL +A++NA  +GV++R   L +D FS
Sbjct: 132 HLLDIGTGSGCIAVTLASRLPCLMVTAIDISTEALVVARNNAERHGVADRIRFLHADLFS 191

Query: 160 -----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                 +   FDVIVSNPPYI       L  EVR F+P+++L    DG+  Y  +A+   
Sbjct: 192 LPDERGLSAPFDVIVSNPPYIAEDEWAGLQPEVRLFEPQLALTTR-DGIECYHAVAEVAP 250

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             L   G+   E   +  + V  I E      V   KDY G DRV+
Sbjct: 251 SLLKSGGMLCFESHADAALKVAGIMERWGFSSVAVMKDYSGLDRVV 296


>gi|317968709|ref|ZP_07970099.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Synechococcus sp. CB0205]
          Length = 300

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 109/209 (52%), Gaps = 15/209 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVC 112
           WRD   + L ++     PR ETE+LVD AL  +     K D +    R  DLGTG+G + 
Sbjct: 85  WRD---IELEVAPGVLIPRQETEVLVDLALDCA-----KGDQLGSAPRWADLGTGSGCIA 136

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
           +AL K  P  +G  VD S +AL  A+ NA     S   D  + DW+ ++    G  D++V
Sbjct: 137 IALAKGLPNGQGCAVDRSAEALRQAERNAKAILGSACLDFREGDWWDAIRDQWGQLDLVV 196

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI + +   L   VR+ +P ++L+GG DGL   RTIA G +  L   G   +E  Y
Sbjct: 197 SNPPYIPAAVWAQLEPVVREHEPELALNGGSDGLEALRTIAAGAALGLTPGGWLLLEHHY 256

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +Q   V+ + E+  L  V A KD  G  R
Sbjct: 257 DQSRAVLELLEAAGLVNVQAHKDLEGIQR 285


>gi|15616336|ref|NP_244641.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
 gi|10176398|dbj|BAB07493.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
          Length = 289

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 7/216 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G   FY  +  +      PRPETE LV + L     + +K + + ILD+GTG+GA
Sbjct: 68  VQHLIGVESFYGRQFQVDQHVLIPRPETEELVLAVLKEIRRQFKKEEEITILDIGTGSGA 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDV 167
           + + L  E        VDIS  AL++A  NA   G + +   +  D    F      FDV
Sbjct: 128 IAVTLALEEERTNVTAVDISRDALQVAADNARRLGANVQL--IHGDLGEPFLKTGERFDV 185

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVE 226
           IVSNPPYI +V  D L + VRD +P ++L GG+DGL  YR +   +     ++ G+ ++E
Sbjct: 186 IVSNPPYIPTVEKDTLAVHVRDHEPALALFGGVDGLDVYRRLMSQLPALTKEEKGMVALE 245

Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
           IG  Q +DV ++ ++      V+   D  G DR++L
Sbjct: 246 IGAGQGMDVEKLMQTAYPKAAVDVLYDLNGKDRIVL 281


>gi|87309296|ref|ZP_01091432.1| hemK protein [Blastopirellula marina DSM 3645]
 gi|87287935|gb|EAQ79833.1| hemK protein [Blastopirellula marina DSM 3645]
          Length = 294

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 3/225 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +  G    ++    D V+ +  R      + +      +  +LG R+FY+   
Sbjct: 31  DAELLLAQALGCKRIELYTRFDEVVAEEPRGKFRQLVKQRAAGMPVAYLLGRREFYSRDF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETE LV +AL   L    K +  RI D+G G+G + + L K+ P  +  
Sbjct: 91  RVTPDVLIPRPETEHLVIAALD-RLRETAKTETARICDVGAGSGCIAITLAKDLPKLQVT 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183
            +DIS  AL++A+ NA  +GV+E+   ++SD  +++    +FD+IVSNPPYI  V    L
Sbjct: 150 AIDISAAALQVAQQNAEEHGVAEQIKFVKSDLLTALPENAVFDLIVSNPPYIGLVEKPSL 209

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +V  ++P ++L  G DGL   R +      HL   G   +E G
Sbjct: 210 PKDVLQYEPHVALFSGEDGLDAIRELVRQAPSHLKPGGWLLIEFG 254


>gi|22537234|ref|NP_688085.1| HemK family modification methylase [Streptococcus agalactiae
           2603V/R]
 gi|25011159|ref|NP_735554.1| modification methylase, HemK family [Streptococcus agalactiae
           NEM316]
 gi|76798428|ref|ZP_00780668.1| HemK protein [Streptococcus agalactiae 18RS21]
 gi|77410474|ref|ZP_00786835.1| modification methylase, HemK family [Streptococcus agalactiae
           CJB111]
 gi|77413281|ref|ZP_00789477.1| modification methylase, HemK family [Streptococcus agalactiae 515]
 gi|22534101|gb|AAM99957.1|AE014241_8 modification methylase, HemK family [Streptococcus agalactiae
           2603V/R]
 gi|23095558|emb|CAD46767.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76586223|gb|EAO62741.1| HemK protein [Streptococcus agalactiae 18RS21]
 gi|77160668|gb|EAO71783.1| modification methylase, HemK family [Streptococcus agalactiae 515]
 gi|77163422|gb|EAO74372.1| modification methylase, HemK family [Streptococcus agalactiae
           CJB111]
 gi|319745080|gb|EFV97406.1| protein-(glutamine-N5) methyltransferase [Streptococcus agalactiae
           ATCC 13813]
          Length = 276

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/248 (33%), Positives = 126/248 (50%), Gaps = 12/248 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +      PRPE
Sbjct: 35  STTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LVD  L  S  ++E      +LD+GTG+GA+ ++L KE P +  +  DIS  AL++A
Sbjct: 95  TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N        ++SD FS++ G FD+IVSNPPYI     D +G  V   +P  +L 
Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISGKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254
              +GL+ YR I +    +L   G    EIGY Q  D+  +   ++ F  N     KD  
Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVL 273


>gi|257785107|ref|YP_003180324.1| modification methylase, HemK family [Atopobium parvulum DSM 20469]
 gi|257473614|gb|ACV51733.1| modification methylase, HemK family [Atopobium parvulum DSM 20469]
          Length = 297

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 10/226 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTGLS  Q+  + D  L   +R  +  AI R  + E +  + G   F ++ LT   
Sbjct: 34  LLSAVTGLSRVQLYTNFDKPLSADERARMREAIKRRAEGEPLQYVTGEMPFRHLVLTCEP 93

Query: 70  DTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
               PRPETE+LVD AL     S P  +    VR+L++G GTG + L++  E P  +   
Sbjct: 94  GVLIPRPETEVLVDVALEGVDASTPNADGE--VRVLEVGVGTGCISLSIATERPQTRVYA 151

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE-SVIVD 181
            D+S KA+ +A  N     + +R + ++ D    V       F V+VSNPPYI  SV+  
Sbjct: 152 TDLSPKAIALATRNRDALDLQDRVELIECDLVEGVPAELAQSFSVLVSNPPYIPTSVLEQ 211

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  EV+ F+P+++LDGG DGL  YR + +   R L   G+  VE+
Sbjct: 212 EVPAEVKGFEPKLALDGGEDGLDVYRRLLEVAPRMLLPGGMLCVEL 257


>gi|323527483|ref|YP_004229636.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1001]
 gi|323384485|gb|ADX56576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1001]
          Length = 295

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V G    Q+I   D VLD    +R+    A  R +  E + +I+G R+F+ +
Sbjct: 34  EARILLTHVLGWRQTQLITRADEVLDGACVERYLALQA--RRVAGEPVAQIVGAREFFGL 91

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLV++AL      ++     R+LDLGTGTGA+ +A+    P  +
Sbjct: 92  EFEVTPHVLIPRPETELLVETALTA----MQDLARPRVLDLGTGTGAIAVAIASMRPDAQ 147

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVE-GL-FDVIVSNPPYIES 177
              VD S +AL +A  NA     ++R        QSDW+ +++ GL FDVIVSNPPYI S
Sbjct: 148 VTAVDRSAEALAVAARNAARRLDAKRPGGAVIFAQSDWYGALDRGLCFDVIVSNPPYIAS 207

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R ++PR +L    DGLS  R I  G    L+  G+  +E GY+Q   V  
Sbjct: 208 GDPHLAQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLSSHGILWMEHGYDQAETVRT 266

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  ++    V + +D  G +R+
Sbjct: 267 LLTAQGFADVRSERDLAGIERI 288


>gi|258513429|ref|YP_003189651.1| modification methylase, HemK family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777134|gb|ACV61028.1| modification methylase, HemK family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 289

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 138/267 (51%), Gaps = 17/267 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G+    + +  D VL   +       I R +K E +  + G ++F  +  
Sbjct: 25  DAEVLLMHLLGIERAGLYMRFDYVLTLEEAKAYRCLIERRVKGEPVAYLTGHKEFMGMDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFK 123
            ++     PRPETE+LV+ AL F    +E +  + + +LD+GTG+GA+ +++ + +   +
Sbjct: 85  IVNPAVLVPRPETEILVERALKF----LEGKPGEELLVLDIGTGSGAIAVSMARMNSRLR 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESV 178
              VD S  AL +A+ NA  +GV+ R      D        ++EG  D+I +N PY+ S 
Sbjct: 141 VYAVDCSRDALVLAQHNAAIHGVAGRIHFFHGDLLYPLSNLALEGKADLIAANLPYVPSG 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L ++VR ++P+I+L+GG+DGL  YR +  G    L   GL  +EIG  Q  DV+ +
Sbjct: 201 DISGLPVDVRSYEPQIALNGGLDGLDIYRRLLPGAGDLLKSGGLLMLEIGPGQ-ADVL-V 258

Query: 239 FESRKLFLV----NAFKDYGGNDRVLL 261
            E   + +V        DY G +RV+L
Sbjct: 259 QEMTGMGMVWCCSEIVFDYAGRERVVL 285


>gi|227871846|ref|ZP_03990246.1| polypeptide chain release factor methyltransferase [Oribacterium
           sinus F0268]
 gi|227842304|gb|EEJ52534.1| polypeptide chain release factor methyltransferase [Oribacterium
           sinus F0268]
          Length = 346

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 34/243 (13%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-------------FSLPRIEKRD 97
           + +ILG + FY +   ++ D   PR +TE LVD  L                   +EK++
Sbjct: 99  LAQILGRQSFYGLDFFVNEDVLIPRADTECLVDLVLEDYADLAKQAGKTYAEKQNLEKQN 158

Query: 98  V-------------------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                               + ILDL TG+G + +++ K  P+ + + VD+S KAL +AK
Sbjct: 159 SEHVSNKHEDNVENGAISSSLNILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAK 218

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            NA  + + E    LQSD  ++V+G  F +++SNPPYI S ++  L  EV +++P+++LD
Sbjct: 219 KNAEKH-LGENVRLLQSDLLTAVQGKKFSLLLSNPPYIVSRVIPGLEREVSEYEPKMALD 277

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           GG DGL  YR IA    + L       +EIGY+Q   V  IF+      V  F D  GN 
Sbjct: 278 GGEDGLLFYRRIAKEAKKVLLPGARLYLEIGYDQGESVKDIFQKEGYEAVEVFPDLSGNP 337

Query: 258 RVL 260
           RV+
Sbjct: 338 RVV 340


>gi|299139886|ref|ZP_07033058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX8]
 gi|298598240|gb|EFI54406.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX8]
          Length = 280

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 9/266 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+ + L  V G     ++  P+  LD  Q         R    E +  + G ++FY + 
Sbjct: 17  RDAETLLAHVLGHPRAWLLAHPEEELDAAQAETFLGLAARRAAGEPLQYLTGVQEFYGLS 76

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++ +   PRPETE LV++ + ++    + R ++RI D+GTG+GA+ +AL         
Sbjct: 77  LRVTPEVLIPRPETEHLVEAVILWATQFHDGR-ILRIADVGTGSGAIAIALATHLAGVAL 135

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESV 178
           V +D S  AL +A+ NA   G  ER   L++D    +         FD IVSNPPYI   
Sbjct: 136 VAIDQSEGALAVAEENAHALGCRERITFLRNDLLKDLSSALPHYPPFDAIVSNPPYIPLG 195

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               + +EV   +P  +L  G DGL+ Y+ +       L+  GL ++EIG+ Q+  +  +
Sbjct: 196 DAATMQVEVVQHEPHSALFAGDDGLAIYQRLIPQAHAALHPCGLLAMEIGFGQRPALEEL 255

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   V    DY G  R++L  R
Sbjct: 256 LVDWS--NVRFVDDYAGIPRIVLAER 279


>gi|292669719|ref|ZP_06603145.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC
           43541]
 gi|292648516|gb|EFF66488.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC
           43541]
          Length = 292

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 124/259 (47%), Gaps = 3/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G     + V  D  +    R    +       H  +  +LG R+F  +  
Sbjct: 30  DAEVLLSAVLGKDRTYLYVHFDEPIASAARTLFRSYAKERGAHVPLAYLLGRREFMGLEF 89

Query: 66  TLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ DT  PRP+TE+L   A+ F    R      +   D+GTGTGA+ L++L  +     
Sbjct: 90  RVTRDTLIPRPDTEILAQFAVDFLRARRAAGASDLTAADIGTGTGAIALSVLHYTENTYA 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VDIS  A + A+ NA   G++ R +    D    + G  +DVI+SNPPYI S  ++ L
Sbjct: 150 DAVDISPVAADTARENAERLGLTTRIEIHVGDLLVPLAGRTYDVILSNPPYIPSADIEGL 209

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
             EVR ++PR++LDGG DGL  YR +       L   G  +VE+G     D   +  +  
Sbjct: 210 MPEVRGYEPRLALDGGADGLVFYRRMMAEAPSMLKNGGAIAVEVGIGAAADAAALVAAHP 269

Query: 243 KLFLVNAFKDYGGNDRVLL 261
           ++      +D GG DRV++
Sbjct: 270 RIVRTEILRDLGGIDRVVV 288


>gi|83591212|ref|YP_431221.1| HemK family modification methylase [Moorella thermoacetica ATCC
           39073]
 gi|83574126|gb|ABC20678.1| [protein release factor]-glutamine N5-methyltransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 283

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 123/237 (51%), Gaps = 19/237 (8%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           RF+   AI R      +  + G ++F ++   ++     PR +TE++V++ L     R++
Sbjct: 56  RFW--QAIDRRAAGYPLQYLTGHQEFMSLDFKVTPAVLIPRQDTEVVVEAVLE----RLD 109

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +   I D GTG+GA+ L+L    P  +    DIS  AL +A+ NA   G++ R   LQ
Sbjct: 110 PCESYTIADCGTGSGAIALSLAHYLPRARVYATDISPAALTVAQENARKLGLAARVTLLQ 169

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D+ + + GL  D +V+NPPYI +  +  L  +VR  +PR++LDGG DGL  YR +  G 
Sbjct: 170 GDFLAPLRGLKLDALVANPPYIPTAALPGLPADVRS-EPRLALDGGPDGLDAYRFLLPGA 228

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK------DYGGNDRVLLFCR 264
           +  L   GL ++EIG +Q   V  +  +     V A++      DY G DR  L  R
Sbjct: 229 AGLLRPGGLLALEIGSDQGQAVKDLARA-----VGAYRNEQVLPDYAGRDRCFLAYR 280


>gi|149377993|ref|ZP_01895718.1| hemK protein [Marinobacter algicola DG893]
 gi|149357702|gb|EDM46199.1| hemK protein [Marinobacter algicola DG893]
          Length = 282

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 123/257 (47%), Gaps = 9/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTG S       P+  LD       +  + +  +   +  +LG ++F+++ L
Sbjct: 27  DAELLLGFVTGWSRTTFRAWPERELDATLIARFSTLVEQRCEGHPVAHLLGEQEFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE LV++ALA  LP         +LDLGTGTGA+ LAL  E   ++  
Sbjct: 87  KVNPSTLIPRPDTECLVEAALALDLPA-----NASVLDLGTGTGAIALALASERSGWQVS 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
             D    A+++A  NA   G+       QS+WFS +   +FD+IVSNPPYI    V    
Sbjct: 142 ACDAILAAVDLAIDNAARLGLP--VTVQQSNWFSDLPPAVFDLIVSNPPYIAGDDVHLGQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R I       L   G   +E GY Q   V R+      
Sbjct: 200 GDVR-FEPASALVAGRDGLDDIRLIVAEAPDWLVGGGWLILEHGYEQGAAVRRLLIEAGF 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +DYG  DR  L
Sbjct: 259 ASVETGQDYGQRDRFTL 275


>gi|94500022|ref|ZP_01306557.1| modification methylase, HemK family protein [Oceanobacter sp.
           RED65]
 gi|94427880|gb|EAT12855.1| modification methylase, HemK family protein [Oceanobacter sp.
           RED65]
          Length = 281

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 120/236 (50%), Gaps = 10/236 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+ L   Q    T  + R  + E +  I+G   F+++ + +S  T  PR +TE L+D  +
Sbjct: 47  DTELSQEQYLQFTQLLERRKQGEPVAYIIGQTGFWDLTIKVSPATLIPRGDTESLMDYIV 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P+        +LDLGTGTGA+ LA  KE P    V VD+  +A+ +AK NA  N V
Sbjct: 107 EHFNPK-------NVLDLGTGTGALALATAKEYPQASVVAVDVIEEAVALAKENAKLNKV 159

Query: 147 SERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +   + LQSDWF+ V +  FD+IVSNPPYI++        +VR ++P+ +L     GL+ 
Sbjct: 160 T-NVEILQSDWFALVPKRRFDLIVSNPPYIDANDHHLGEGDVR-YEPKSALVAERHGLAD 217

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              I +     L +DG   VE GY+Q   V  IF       +   +D  G DR  L
Sbjct: 218 IEKICNQALSFLTEDGCLMVEHGYDQGPHVRAIFSQSGFSNIETHQDLAGRDRFTL 273


>gi|27262484|gb|AAN87523.1| methyltransferase [Heliobacillus mobilis]
          Length = 319

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 23/234 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDV------ 98
           +  I G ++F+ + L ++     PR +TELLV++AL          P+ + +        
Sbjct: 78  LQYITGRQEFWGMELQVNPAVLIPRADTELLVEAALTSLKEKMAGFPKRQDKGCDDSPPA 137

Query: 99  --------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   + + D+GTG+GA+ LA+ KE      +  D+S +AL  A+ NA  NG+  R 
Sbjct: 138 QGSVAGKEIWLADVGTGSGAIALAMAKELRCVNVIATDLSPEALATARGNAERNGLGHRI 197

Query: 151 DTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + D    V   GL    ++SNPPYI +  +  L  EV  F+PR++LDGG DGL  YR
Sbjct: 198 TFWEGDLLEPVIAAGLPLQAVLSNPPYIPTEDIGGLQREVAQFEPRLALDGGGDGLHLYR 257

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            +     + L   GL ++EIG++Q   V  +        V    D+ G+DRV++
Sbjct: 258 RLIPQARKVLVPGGLIALEIGFDQGSSVAELMVQHGFVEVRVLPDFQGHDRVVM 311


>gi|162456339|ref|YP_001618706.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56']
 gi|161166921|emb|CAN98226.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56']
          Length = 294

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V G+    +++D +  LD  +         R    E +  +LG R+FY    
Sbjct: 37  DAELLLGKVLGIDRVGLLIDAERPLDRAELAAYRELHQRRRAGEPVAYLLGVREFYGRPF 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCLALLKESPFF 122
            +      PRP+TE+LV+ ALA        R +    R+LDL TG+G V ++L  E P  
Sbjct: 97  RVDPRVLIPRPDTEILVEVALA------RTRHLALSARVLDLCTGSGCVAISLACERPTS 150

Query: 123 KGVGVDISCKALEIAKSNAVTNG-VSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVI 179
           + +GVDIS  AL +A+ NA+  G V+  F  L+SD F+ V  GL +D+I +NPPYI    
Sbjct: 151 RVLGVDISDGALAVARENALRLGAVNAGF--LRSDLFAGVPSGLRYDLITANPPYIPDED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L +++R ++P ++L GG DGL   R I  G    L   G+ ++E+   +   V  +F
Sbjct: 209 VAALQIDIRGYEPHLALAGGPDGLVFTRRIVAGAPALLAAGGVLAMEVEAGKAGAVAELF 268

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +     V+   DYGG++RV+
Sbjct: 269 TAAGFGGVSRHLDYGGHERVV 289


>gi|254253377|ref|ZP_04946695.1| Methylase [Burkholderia dolosa AUO158]
 gi|124895986|gb|EAY69866.1| Methylase [Burkholderia dolosa AUO158]
          Length = 280

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 126/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+    A  R    E + +++G R+F+  
Sbjct: 19  DARVLLAHALGWTRTQLITRGDEPLDAAAIERYRALEA--RRAAGEPVAQLVGVREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGLPYPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              +D S  AL +A+ NA       R       LQSDW+++++   +FD IVSNPPYI  
Sbjct: 133 VWALDRSPAALAVARRNADKLLDPHRPGGPLHWLQSDWYTALDAAPVFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+    V  
Sbjct: 193 HDPHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDHAEAVRT 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  S     V +  D    +R 
Sbjct: 252 LLTSHGFVAVESLADLAAIERT 273


>gi|149019617|ref|ZP_01834936.1| HemK protein [Streptococcus pneumoniae SP23-BS72]
 gi|147930992|gb|EDK81972.1| HemK protein [Streptococcus pneumoniae SP23-BS72]
          Length = 279

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 16/239 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            V  + ++ F+ +   +   H+    I+G  DFY + L +      PRPETE LV+  L 
Sbjct: 46  EVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIPRPETEELVELILT 105

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL++A  NA    + 
Sbjct: 106 ENL-----ETNLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEALDLASENAKNQNLQ 160

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             F   +SD F+ +   +D+IVSNPPYI       +GL V   +P ++L    DGL+ Y 
Sbjct: 161 IFFK--KSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHLALFADEDGLAIYC 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKDYGGNDRVLL 261
            IA+    +L   G   +EIGY Q   V  +F     E R    V   KD  G +R+++
Sbjct: 219 RIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKR----VRTLKDQFGQNRMVV 273


>gi|37521324|ref|NP_924701.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421]
 gi|35212321|dbj|BAC89696.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421]
          Length = 286

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 132/253 (52%), Gaps = 12/253 (4%)

Query: 14  VTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHES--IHRILGWRDFYNVRLTLSSD 70
           VTGL   +V +  P ++   R++     A+ R    E+  +  +LG   + +++L ++  
Sbjct: 33  VTGLDRLRVRLGGPQALEAHREKL---AALWRRRIEEAMPLQYLLGTAHWRDLQLQVNPA 89

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPE+E LVD A+ F           R++DLGTG+GA+ +A+ +  P      VD S
Sbjct: 90  VLIPRPESEALVDVAVDFC----RSCAGARVVDLGTGSGAIAVAVARALPGATVWAVDAS 145

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A +N    G+SE+   L+ +WF  +    FD ++SNPPYI S  +  L  EVR 
Sbjct: 146 EAALVVAGANIERYGLSEQVHLLRGNWFVPLPTQPFDAVLSNPPYIPSAEIAALMPEVRL 205

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVN 248
            +P  +LDGG DGL   R I    +RHL   G+ ++E+   Q   VV++      +  + 
Sbjct: 206 HEPLSALDGGSDGLDAVRQIIADAARHLRPGGILALEVMAGQGPTVVQLLARDSRYGCIR 265

Query: 249 AFKDYGGNDRVLL 261
             +D+ G +R+++
Sbjct: 266 TVRDWAGIERIVV 278


>gi|312884084|ref|ZP_07743797.1| methylase of polypeptide chain release factor [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368254|gb|EFP95793.1| methylase of polypeptide chain release factor [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 286

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 126/261 (48%), Gaps = 13/261 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V       ++  PD  ++          + R    E +  I+G R+F++
Sbjct: 26  ATLDASVLLCHVLDRPRSYLMTWPDRTVESEVVNKFNELVKRRESGEPVAYIVGEREFWS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120
           + L +SS T  PRP+TE LV+ AL       EK  +V+  ILDLGTGTGA+ LAL  E P
Sbjct: 86  LNLKVSSSTLIPRPDTERLVELAL-------EKSTLVKGDILDLGTGTGAIALALASELP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
                GVD+  +A  IA+ NA    + +    L   WF  +  +  F +IVSNPPYIES 
Sbjct: 139 DRNVWGVDLKQEAQHIAQDNAERLSI-KNAQFLFGSWFEPLDHDAKFALIVSNPPYIESD 197

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  +VR F+P  +L     GL+    IA     HL + G    E G +Q   V  +
Sbjct: 198 DPHLSEGDVR-FEPLSALVSEKQGLADIEVIAKQAPEHLLEGGWLLFEHGLDQGEPVRTL 256

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
            E+     V  F+DYG  DRV
Sbjct: 257 LETLGYDQVETFQDYGHRDRV 277


>gi|153956300|ref|YP_001397065.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219856617|ref|YP_002473739.1| hypothetical protein CKR_3274 [Clostridium kluyveri NBRC 12016]
 gi|146349158|gb|EDK35694.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219570341|dbj|BAH08325.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 288

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 111/214 (51%), Gaps = 8/214 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  +F  +   +      PRP+TE LV++AL      I+  +   I DL  GTGA
Sbjct: 74  VKYILGQCEFMGMDFIVKPGVLIPRPDTETLVENALE----EIDNNEFYNICDLCCGTGA 129

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFDTLQSD---WFSSVEGLFD 166
           + ++L K       V  DIS  A E+A+ N      +++R   ++SD   +F   +  F+
Sbjct: 130 IGISLAKFVEHINVVCCDISDTACEVAEQNVRRYYSLNKRISIVKSDLMEYFILNKIKFN 189

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IV NPPYI+  ++D L  +V++++P  +L GG DGL  YR I     + L K+G+   E
Sbjct: 190 MIVCNPPYIKESVIDTLMEDVKNYEPHEALSGGEDGLEFYRKIVKQSLKVLTKNGMLMFE 249

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           IGY+QK DV  I            KD  G DRV+
Sbjct: 250 IGYDQKKDVTSILMKYGFKNTTCIKDLAGKDRVI 283


>gi|326386587|ref|ZP_08208209.1| HemK family modification methylase [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208902|gb|EGD59697.1| HemK family modification methylase [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 282

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 13/224 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVR 100
           + R + HE +  I G ++F+ +   +  +   PR +TE LV++A  AF+      R   R
Sbjct: 63  VARRMTHEPVAYITGHQEFWGLDFLVGPEVLIPRGDTETLVEAAETAFT-----ARPPQR 117

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTG+GA+  A L   P  +G+G+D S  AL +A++NA   G+ +R   + +DW + 
Sbjct: 118 IIDLGTGSGALLCAALSIWPGAQGIGIDRSQGALAMARANANRLGLGQRARIIAADWHTP 177

Query: 161 VE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                 G FD++++NPPY+E+     L   V D +P  +L  G +GL  YR +   +   
Sbjct: 178 GWARDLGRFDLVLANPPYVETSA--DLDRSVVDHEPHSALFAGAEGLDDYRVLVPQLGDL 235

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L  DG+  +EIG+ Q  + V     +  F      D GG  R +
Sbjct: 236 LAPDGIAMIEIGWTQG-EAVCALARQGGFAAQVHTDLGGRPRAV 278


>gi|325689727|gb|EGD31731.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK115]
          Length = 276

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ L L    P ++    D+S  AL +A  NA    ++  F  +QSD   +++G F
Sbjct: 118 TGSGAIALTLANSRPDWQITASDLSNDALALAAENAQFCRLNLAF--VQSDCLDAIQGKF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L K G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVADLL--KKSFPQKRIRVLKDQFGKDRMV 271


>gi|190570979|ref|YP_001975337.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019495|ref|ZP_03335301.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357251|emb|CAQ54673.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994917|gb|EEB55559.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 283

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 104/181 (57%), Gaps = 5/181 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +I+G R+F++    ++    +PRP++E ++ + L +      K+  ++I D GTGTG 
Sbjct: 71  ISQIIGNREFWSKNFIVNQHVLDPRPDSETVISTVLKYYQ---NKKQKIKIADFGTGTGC 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++L E  +  GVG + S +A +I   N   + +  R     + W      LFD+I+S
Sbjct: 128 LLISVLSEYEYAIGVGFEKSLEAYKITYQNTKKHNLLNRAKIFPNSWIE-CRDLFDLIIS 186

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI+   +  L  EV+  +PRI+LDGGIDGLS Y +I   + + L KDG   +EIG +
Sbjct: 187 NPPYIKRSKLKDLQAEVQK-EPRIALDGGIDGLSCYLSIFPILKKCLKKDGFAILEIGED 245

Query: 231 Q 231
           Q
Sbjct: 246 Q 246


>gi|78187349|ref|YP_375392.1| modification methylase HemK [Chlorobium luteolum DSM 273]
 gi|78167251|gb|ABB24349.1| Modification methylase HemK [Chlorobium luteolum DSM 273]
          Length = 296

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 20/251 (7%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
            H+  V PD +    +RF       + L    +  I G + FY +   +      PRPET
Sbjct: 51  QHERPVYPDEL----ERF--RELCRQRLGGRPLQYITGEQWFYGLPFHVDRRVLIPRPET 104

Query: 79  ELLVDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           ELLV+    F+L  +E        V RILD GTG+G + L +    P  + VG+D+S +A
Sbjct: 105 ELLVE----FALELLESDGASASGVPRILDAGTGSGCIALTMAIRMPTLQAVGIDVSLEA 160

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           LE+A++NA  +G  +R      D     FS     FD++VSNPPYI       L  EVRD
Sbjct: 161 LEVARTNAERHGAGDRVSFAVGDMTDPLFSPPGAPFDMLVSNPPYIPESEWAGLQPEVRD 220

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P+++L   + G+  YR +A    R L   G  ++EI  +    VV + E   +  +  
Sbjct: 221 HEPKLALTVPV-GMECYRALAAMAGRLLRPGGRIALEIHADGAGGVVELLEEAGMLDIVV 279

Query: 250 FKDYGGNDRVL 260
            KDY G +R++
Sbjct: 280 KKDYAGLNRIV 290


>gi|119897273|ref|YP_932486.1| HemK protein [Azoarcus sp. BH72]
 gi|119669686|emb|CAL93599.1| HemK protein [Azoarcus sp. BH72]
          Length = 278

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 12/257 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L       + +++  P+  L   +    +  + R ++ E +  ++G R+FY    
Sbjct: 22  DARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRSF 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TELLV+ A+A        +  VR+LDLGTG+GA+ + L  E       
Sbjct: 82  AVTPAVLIPRPDTELLVELAVA----HFSAQQRVRVLDLGTGSGALAITLALELDAADVT 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            +D S +AL +A +NA   G S  F  +QSDWF ++ E  F +IV+NPPYI +   D   
Sbjct: 138 ALDRSREALWVAMANAARLGASVSF--VQSDWFDALGEERFQLIVANPPYIAA---DDAH 192

Query: 185 LEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           LE  D  F+PR +L  G  GL     IA     HL   G   +E GY+Q + V  +    
Sbjct: 193 LEEGDLRFEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYDQAMSVRGLLADA 252

Query: 243 KLFLVNAFKDYGGNDRV 259
               ++++KD  G +RV
Sbjct: 253 GFAAISSWKDLAGIERV 269


>gi|268595711|ref|ZP_06129878.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268549100|gb|EEZ44518.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|317165196|gb|ADV08737.1| HemK [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 295

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 76  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 129

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 130 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 187

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 188 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 246

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 247 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLVGLDRVTL 287


>gi|28378949|ref|NP_785841.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|300766722|ref|ZP_07076639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308181159|ref|YP_003925287.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|28271786|emb|CAD64692.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|300495822|gb|EFK30973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308046650|gb|ADN99193.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 288

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
             I R +  E +  +LG   FY + L +      PR ETE LVD    + L  +     V
Sbjct: 63  QGIDRVVAGEPVQYVLGDAPFYGLTLQVDPAVLIPRVETEELVD----WILTDVPATAPV 118

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG+GA+ LA+  E P ++    DIS  AL++AK+NA  + +      + SD  +
Sbjct: 119 RLLDVGTGSGAIALAIKHERPAWEITASDISTAALQVAKANA--DRLHLDVKLVHSDLLT 176

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           SV    FD+IVSNPPYI +   D +   V   +P+ +L    DGL+ Y  +A  V+ HL 
Sbjct: 177 SVSAQPFDIIVSNPPYIAASEKDVMDASVLAHEPQTALFADHDGLALYEQLATTVADHLT 236

Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
             G   +E GY+Q   +  +F +S     V   +D  G++R+L
Sbjct: 237 STGRLYLEFGYHQGPALQTLFAQSMPDATVTLRQDMAGHNRML 279


>gi|83816659|ref|YP_446173.1| hemK protein [Salinibacter ruber DSM 13855]
 gi|294508099|ref|YP_003572157.1| protein methyltransferase [Salinibacter ruber M8]
 gi|83758053|gb|ABC46166.1| hemK protein [Salinibacter ruber DSM 13855]
 gi|294344427|emb|CBH25205.1| Protein methyltransferase [Salinibacter ruber M8]
          Length = 303

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 114/224 (50%), Gaps = 11/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R ++ E +  ILG+  FY +RL +S D   PRPETE +VD AL      IE+    R+
Sbjct: 76  VGRRVQGEPLQHILGYASFYGLRLRVSPDVMVPRPETETVVDRALTC----IEEVSRPRV 131

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD GTG+G + LAL  E P  +    D+S  AL +A++NA   G+  RF   + D  + V
Sbjct: 132 LDAGTGSGCIALALKHERPDAEVHACDVSTDALAVARANAQDLGLDVRF--FEGDLCAEV 189

Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                   D++VSNPPYI     + L   VR++DP  SL  G D L  YR +   VS   
Sbjct: 190 PAATPRDVDLLVSNPPYIPDAEAESLPPVVREYDPDRSLFAGRDPLRFYRALVRWVSACC 249

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVL 260
              G   +E+      +V R+F   + +  V+  +D  G  R++
Sbjct: 250 VPGGSFVLEVHAEHAAEVERLFRGEEGVGAVHTEEDLSGRPRIV 293


>gi|294055590|ref|YP_003549248.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coraliomargarita akajimensis DSM 45221]
 gi|293614923|gb|ADE55078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coraliomargarita akajimensis DSM 45221]
          Length = 280

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 124/260 (47%), Gaps = 8/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +    G+    + +D +  L D Q   L   + R    E +  ILG  +F  + L
Sbjct: 26  DTDLLIAHSLGIKRLDIYLDLERPLTDAQLDDLRPLVKRRASREPLQYILGSVEFAGLEL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                   PRPETE LV+      + R+++     ILDLGTGTGA+ LAL K        
Sbjct: 86  KTDVRALIPRPETEELVE----LLVQRLQRAPTC-ILDLGTGTGALALALAKRYSDAAVT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
            VD+S +AL +A  NA     S+R   L+  WF  +     FD+IVSNPPY+    +   
Sbjct: 141 AVDLSAEALTLAAENAEALDFSDRVRLLEGSWFVPLPESERFDLIVSNPPYLTEEEMTTA 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV  ++P  +L  G+DGL   RTI       LN+ GL +VE G +Q  +++++ +   
Sbjct: 201 EPEVVGYEPHSALVSGVDGLDDLRTIFAEAKERLNEGGLFAVETGISQHDELLKMAKQGG 260

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
                + +D  G  R  +FC
Sbjct: 261 FEHAESVEDLSGRSR-FVFC 279


>gi|307823418|ref|ZP_07653647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacter tundripaludum SV96]
 gi|307735403|gb|EFO06251.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacter tundripaludum SV96]
          Length = 284

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 121/258 (46%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   LC+        +   PD  L           + +  +   I  I G R+F++
Sbjct: 22  ALLDAEILLCQALNQPRSHLRAWPDKPLLPEHLAAFRALLEQRQQGIPIAYITGNREFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S D   PRP+TELL++     SL  I   D V+I+DLGTG+G + + L  E P  
Sbjct: 82  RDFQVSPDVLIPRPDTELLIE----LSLKLIPADDPVKIIDLGTGSGIIAITLAAERPHA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +    D S  AL IA+ NA  + ++      QS+WF+ V    F++++SNPPYI      
Sbjct: 138 QISATDFSLAALRIARLNADKHHIN-TIQFYQSNWFADVPATQFNLVISNPPYIAEDDSH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     GL   + IAD    +L   G   +E GY+Q+  V  +F+ 
Sbjct: 197 LQQGDVR-FEPQTALCAAEQGLGDIKIIADAARNYLEPRGHLLIEHGYDQQQQVQTLFKD 255

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V  + D  G  RV
Sbjct: 256 LHYDNVQTYTDLSGQPRV 273


>gi|58698720|ref|ZP_00373607.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534756|gb|EAL58868.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 229

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 6/211 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +I+G R+F++    ++    +PRP++E L+ + L +  P  ++R  ++I D GTGTG 
Sbjct: 16  ISQIIGNREFWSKNFIVNQHVLDPRPDSETLISTVLKY-YPNKKQR--LKIADFGTGTGC 72

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +++L E  +  GVG + S +A ++A  N   + +  R     S W    + LFD+I+S
Sbjct: 73  LLISVLSEYKYAVGVGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSWIECSD-LFDLIIS 131

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI+   +  L  EV+  +P+ +LDGGIDGL+ Y +I   + R L K+G   +EIG +
Sbjct: 132 NPPYIKRSKLKDLQAEVQK-EPKTALDGGIDGLNCYLSIFPILRRCLKKNGFAILEIGED 190

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Q  ++ +I  S +L       D  G  R ++
Sbjct: 191 QS-NIDKIIPSYELAFQEYVYDLAGMKRCIV 220


>gi|148244860|ref|YP_001219554.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326687|dbj|BAF61830.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 270

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 109/207 (52%), Gaps = 14/207 (6%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G + FY++   ++ DT  PRPETELL+D AL        +     +LDLGTG+G + + +
Sbjct: 72  GTKGFYHLDFKVTPDTLIPRPETELLIDIALGL----FNQNQTYEVLDLGTGSGVIAITI 127

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
             ++P +     D S  AL +AK N  TN      +     WF +     FD+I+SNPPY
Sbjct: 128 SDKNPNWNLTATDFSINALAVAKQNTKTN-----INFQLGSWFEATPNQTFDLIISNPPY 182

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I+    + + L    F+P+ +L  G DGL   + I + + + LN+ G   +E G+NQ+  
Sbjct: 183 IKQ---NDIHLNELRFEPQSALISGKDGLDDIQIIINNIPKFLNEKGYLLLEHGFNQQQK 239

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           ++++ +    F +  FKDY   +R +L
Sbjct: 240 IIQLLKDN-FFNIKKFKDYNQKNRAIL 265


>gi|239999900|ref|ZP_04719824.1| HemK [Neisseria gonorrhoeae 35/02]
          Length = 273

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/221 (38%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V    D  G DRV L
Sbjct: 225 GFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLVGLDRVTL 265


>gi|218133362|ref|ZP_03462166.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992235|gb|EEC58239.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC
           43243]
          Length = 289

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 134/269 (49%), Gaps = 17/269 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDD-RQRFFLTNAIV-RSLKHESIHRILGWRD 59
           A  DS + L  +TG+     I++   SV +D  +R+   +A++ R   H  +  I G   
Sbjct: 30  AEYDSFALLEYITGMDRTAYILNGSKSVPEDIAERY---DAVIDRRSSHIPLQHITGQAW 86

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     ++SD   PR +TE+LV  AL      I  +D V  LD+ TG+G + + L  E 
Sbjct: 87  FYGRGFNVNSDVLVPRQDTEVLVSEALKV----INAKDSV--LDMCTGSGCIIITLALEK 140

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
              + +G DIS  AL++A  N    G ++    ++S+ FS +    + LFDVIVSNPPYI
Sbjct: 141 KLGRALGADISEAALKVASGNREKLG-ADDVTFVKSNIFSDINVNDDELFDVIVSNPPYI 199

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  ++ L  EVR  DP I+LDG  DGL  YR I      ++   G    EIG  Q  DV
Sbjct: 200 ATGEIETLTEEVRIHDPYIALDGLEDGLHFYREITQQSMNYIKSGGWLLYEIGCTQAHDV 259

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             I        +   KD  G DRV++  R
Sbjct: 260 SDIMSEYGYSNIKVIKDLAGLDRVVMGQR 288


>gi|307131077|ref|YP_003883093.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Dickeya dadantii 3937]
 gi|306528606|gb|ADM98536.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Dickeya dadantii 3937]
          Length = 283

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D +   L   + R    E I  ++G R+F+++ 
Sbjct: 22  RDAEILLEHVTGKGRTFLLAFGETELTDGEGSALAALLARRATGEPIAYLVGHREFWSLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP         +LDLGTGTGA+ LA+  E P  + 
Sbjct: 82  LAVSPATLIPRPDTECLVEHALAH-LP----AGASSVLDLGTGTGAIALAIAHERPDCQV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
           VG+D    A+ +A  NA   G++  RF  L  DWFS ++G  F +IVSNPPYI+      
Sbjct: 137 VGIDRQPDAVALASHNASQLGIANARF--LPGDWFSPLDGQRFSLIVSNPPYIDEHDPHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+  R I       L   G   +E G+ Q   V  +    
Sbjct: 195 SRGDVR-FEPASALVAREAGLADLRQIIRQAGGFLLDSGWLLLEHGWQQGDAVRSLLTQY 253

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V  ++DYG N+RV L
Sbjct: 254 GFVQVKTYRDYGDNERVTL 272


>gi|90407673|ref|ZP_01215853.1| Methylase of polypeptide chain release factor [Psychromonas sp.
           CNPT3]
 gi|90311264|gb|EAS39369.1| Methylase of polypeptide chain release factor [Psychromonas sp.
           CNPT3]
          Length = 277

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 8/257 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   LC V    S  ++  P+ +L D Q+      I   +K   +  + G R+F++
Sbjct: 20  ALLDAQVLLCFVLQKESVYLMTWPERLLTDMQKEAYKALIDERIKGVPVAYLTGTREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +++ T  PR +TE LV+ AL    P         ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPFKVNASTLIPRADTETLVEYALQVCSPN------SHILDLGTGTGAIILALASELPHA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD +  A+++A  N     + +  +  QSDWFS V G FD+IVSNPPYI+      
Sbjct: 134 QCSAVDFNADAVQLAIENRQALKL-DNVNIYQSDWFSQVHGRFDLIVSNPPYIDKEDHHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+    I      +L  +G   +E G+ Q   V  IF   
Sbjct: 193 AEGDVR-FEPLSALVADDKGLADIHLIVSQARLYLKTNGTLMIEHGFEQGEAVRNIFRLF 251

Query: 243 KLFLVNAFKDYGGNDRV 259
           +   +    D   N+R+
Sbjct: 252 EFDEIRTECDLARNERI 268


>gi|238899146|ref|YP_002924828.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466906|gb|ACQ68680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 285

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L   ++  L   + R  + E I  ++G R+F+++ 
Sbjct: 22  RDAEILLGYVTGKPRSVLLGFGETKLTVEEQASLEIIVQRRAQGEPIAYLIGEREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +++S  T  PRP+TE LV+ AL   +P    R   R+LDLGTGTG + LAL  E      
Sbjct: 82  ISVSPVTLIPRPDTECLVEQALKH-IP----RGASRVLDLGTGTGCIALALGHERSDCTI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G DI  + +++A  NA   G+       Q +WFS+V G F VIVSNPPYI++       
Sbjct: 137 IGTDIKEETIKLASHNAKKLGLP-HLSFFQGNWFSAVNGYFSVIVSNPPYIDAEDPHLNK 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L    +GL+  + I      +L   G   +E G+ Q   +  +F     
Sbjct: 196 GDLR-YEPLSALVSADEGLADVKHIIRESPHYLTSCGWLLLEHGWQQSDKIQTLFYQTGF 254

Query: 245 FLVNAFKDYGGNDRV 259
             V+ ++D GG+ RV
Sbjct: 255 SSVSTYRDDGGHPRV 269


>gi|67921948|ref|ZP_00515464.1| Modification methylase HemK [Crocosphaera watsonii WH 8501]
 gi|67856164|gb|EAM51407.1| Modification methylase HemK [Crocosphaera watsonii WH 8501]
          Length = 301

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 111/217 (51%), Gaps = 10/217 (4%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAV 111
           I  WR F    L +S D   PRPETEL++D A+  +  +    D++    LDLGTG+GA+
Sbjct: 88  ITPWRRF---SLKVSPDVLIPRPETELIIDFAVE-AAKQSPNPDLMFGHWLDLGTGSGAI 143

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVI 168
            L L    P      VD S KAL IA+ NA+  G S R +  Q  W++ +E   G    +
Sbjct: 144 ALGLGDSFPQATIHAVDTSSKALTIAQENAIQAGFSHRINFYQGSWWTPLEQLKGQVSAM 203

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI + ++  L  EV++ +P ++LDGG DGL   R + D    +L   G+  VE+ 
Sbjct: 204 VSNPPYIPTSLLSELQPEVQEHEPILALDGGNDGLEAIRYLIDTSPDYLVSGGIFLVEMM 263

Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             Q   V ++ E+   +  +    D  G  R  L  R
Sbjct: 264 AGQGETVRQLLETSGHYQSIQTLPDLAGISRFALAYR 300


>gi|225027776|ref|ZP_03716968.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353]
 gi|224954922|gb|EEG36131.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353]
          Length = 297

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 31/270 (11%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D   F     G    +++ + +SVL  R++               +  ++G  +F     
Sbjct: 37  DRAEFYMNPNGEVKEELLAELESVLKQREQRV------------PLQYLMGECEFMGYDF 84

Query: 66  TLSSDTFEPRPETELLVDSALA-----FSLPRIEKRDV--------VRILDLGTGTGAVC 112
            +      PR +TE LV+ A+       +  R E  +         V++LDL TG+G + 
Sbjct: 85  YVDERVLIPRQDTECLVELAVEDIRNRKTQNRCESNNTADQKNEQKVKVLDLCTGSGCIG 144

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +++ K  P  +    DIS  AL +AK NA  +  GV+     ++ + F ++EG FD I+S
Sbjct: 145 ISVAKLCPDTEVTLADISEGALSVAKKNAQNLDAGVT----LIKGNLFENIEGRFDYILS 200

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S +++ L  EV++ +PR++LDG  DGLS YR I +    +LN DG    EIG  
Sbjct: 201 NPPYIPSEVIEGLMPEVKEHEPRLALDGEADGLSFYREIINEAPDYLNPDGRIYFEIGAE 260

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q  D+  +   R    V   KD  G DR++
Sbjct: 261 QGEDLTHLMNERGFSEVKVHKDLAGLDRIV 290


>gi|332361224|gb|EGJ39028.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1056]
          Length = 276

 Score =  116 bits (290), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 8/216 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H     I G  DF  + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHRPAQYINGRSDFLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL      ++    D+S  AL +A+ NA +  +S  F  +QSD F ++ G F
Sbjct: 118 TGSGAIALALANSRSDWQITASDLSGDALALAEENAQSCNLSLTF--VQSDCFEAISGSF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR IA+    +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           EIGY Q   V  + E       +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELLEKNFPQKRIRVLKDQFGKDRMV 271


>gi|241759168|ref|ZP_04757276.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria flavescens SK114]
 gi|241320587|gb|EER56864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria flavescens SK114]
          Length = 270

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L   +G +  Q++      + D  R        R LK E +  +LG R+FY  R 
Sbjct: 16  EARMLLKYASGYTRVQLLTRGGEEIPDEVRQRADRLAQRRLKGEPMAYLLGEREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE LV++ L    P+       R+ DLGTG+GA+ + +  E       
Sbjct: 76  AVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDADVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182
             DIS  AL+ A+ NA   G    F   Q  WF +    EG +DVIVSNPPYIE+     
Sbjct: 130 ASDISTGALDTARQNAAELGAKVEF--AQGSWFDTDRPSEGRYDVIVSNPPYIENGDEHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I    
Sbjct: 188 SQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIMLKN 246

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   +D  G DRV L
Sbjct: 247 GFAEVATEQDLAGLDRVTL 265


>gi|302384869|ref|YP_003820691.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium saccharolyticum WM1]
 gi|302195497|gb|ADL03068.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium saccharolyticum WM1]
          Length = 288

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H+I G R+F  +   ++     PR +TE LV+  L     +  K  + +ILDL TG+G 
Sbjct: 77  LHQITGSREFMGLDFEVNEHVLIPRQDTETLVELVL-----KDYKGKMPKILDLCTGSGC 131

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVI 168
           + ++L K   F +    DIS +AL +A+ NA  +    R   ++SD F + +    FDVI
Sbjct: 132 IAISLAKLGGFDRVTAADISEEALLVAERNAGKHLGEGRITLVKSDLFEAFKNQRTFDVI 191

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI + I++ L  EVRD +P ++LDG  DGL  YR +A     H+   G    EIG
Sbjct: 192 VSNPPYIPTKIIEGLQPEVRDHEPMLALDGKEDGLYFYRILALESRSHMVLGGAVYFEIG 251

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Y+Q   V  + +      +    D  G DRV+
Sbjct: 252 YDQGEAVSGLLKDAGFGQIRVVPDAAGLDRVV 283


>gi|260584606|ref|ZP_05852352.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella elegans ATCC 700633]
 gi|260157629|gb|EEW92699.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella elegans ATCC 700633]
          Length = 291

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 118/228 (51%), Gaps = 13/228 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++R    E +  I    +FY     +S DT  PRPETE LV+  +AF    + ++   ++
Sbjct: 70  LIRLSNFEPLQYITKQAEFYGREFIVSPDTLIPRPETEELVEKIIAF----LSEQSTGKV 125

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L++G GTG +   L  E   F   GVDIS  ALE+AK N     + E      SD F  V
Sbjct: 126 LEIGVGTGCIIHTLALECSDFSYQGVDISEGALEVAKKNQEKYEL-ENVSLYLSDVFQEV 184

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               F  I+SNPPYI+    + +   V  F+P ++L    +GL+ YR IA+ +  +L ++
Sbjct: 185 SPHKFIAIISNPPYIDVSEKNVMDQSVLRFEPEVALFAEDEGLAIYRMIAENLENYLLEE 244

Query: 221 GLCSVEIGYNQKVDVVRIFE----SRKLFLVNAFKDYGGNDRVLLFCR 264
           G    EIG+ Q   V ++FE    +RK   V+  KD  GNDR+++  R
Sbjct: 245 GQAFFEIGFQQGKAVQQLFEYYCPNRK---VSVHKDLSGNDRMIIVGR 289


>gi|163750756|ref|ZP_02157991.1| hemK family protein [Shewanella benthica KT99]
 gi|161329451|gb|EDQ00445.1| hemK family protein [Shewanella benthica KT99]
          Length = 278

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 124/237 (52%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD  L   Q    T  + R +    I  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 44  PDERLTSDQVVDYTKMVQRRVLGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 103

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP  E     ++LDLGTGTGA+ L+L  E   ++   VD   +A+ +AK+N     
Sbjct: 104 L--NLPLAEN---AQVLDLGTGTGAIALSLAYEKKEWQITAVDKIIEAVALAKANREHLK 158

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++ + +QSDWF SV    F++IVSNPPYI+         +VR F+P+ +L  G  G +
Sbjct: 159 L-QQVEIIQSDWFDSVTCYDFNLIVSNPPYIDETDAHLDQGDVR-FEPQSALTAGEAGFA 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA     +L   G   +E GY Q + + +         V   +D+G NDR  L
Sbjct: 217 DLYYIAASARDYLAPGGYLLLEHGYQQAMPLRKKMIELGYENVATVRDFGSNDRCTL 273


>gi|293553328|ref|ZP_06673964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1039]
 gi|291602552|gb|EFF32768.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1039]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 22/242 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 48  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106

Query: 87  AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                  E  DV + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G
Sbjct: 107 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 160

Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+I+L    DG
Sbjct: 161 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKIALFAENDG 216

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258
           L+ Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R
Sbjct: 217 LAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNER 273

Query: 259 VL 260
           ++
Sbjct: 274 MI 275


>gi|71903503|ref|YP_280306.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS6180]
 gi|71802598|gb|AAX71951.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS6180]
          Length = 279

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 120/228 (52%), Gaps = 8/228 (3%)

Query: 5   RDSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           R++ S++ R +   SS  +++  +  +       L +      +H S   I G   F ++
Sbjct: 21  RENLSYVFREIKEWSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L +      PRPETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++
Sbjct: 81  KLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQ 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DIS  AL++AK+NA    +   F  ++SD FS + G FD+IVSNPPYI     + +
Sbjct: 136 VTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFDIIVSNPPYISYEDKEEV 193

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            L V   +P ++L    +G + YR I +    +L K+G    EIGY Q
Sbjct: 194 SLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQ 241


>gi|257885489|ref|ZP_05665142.1| modification methylase HemK [Enterococcus faecium 1,231,501]
 gi|257821345|gb|EEV48475.1| modification methylase HemK [Enterococcus faecium 1,231,501]
          Length = 290

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 59  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117

Query: 87  AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                  E  DV + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G
Sbjct: 118 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 171

Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DG
Sbjct: 172 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 227

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258
           L+ Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R
Sbjct: 228 LAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VKIKKDLFGNER 284

Query: 259 VL 260
           ++
Sbjct: 285 MI 286


>gi|222153024|ref|YP_002562201.1| methyltransferase [Streptococcus uberis 0140J]
 gi|222113837|emb|CAR41935.1| putative methyltransferase [Streptococcus uberis 0140J]
          Length = 274

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 8/215 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I+G   F ++ L++      PRPETE LVD  LA +         +R+LD+GT
Sbjct: 64  QHRSPQYIVGQAYFRDLVLSVDERVLIPRPETEELVDLILAEN-----STQSLRLLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P +     DIS +AL +A  NA   G    F  ++SD F S+ G FD
Sbjct: 119 GSGAIAISLKKERPDWDVFASDISPEALALANYNAEQLGCQITF--VESDIFRSITGSFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + +G+ V   +P ++L    +G + YR I +    +L ++G    E
Sbjct: 177 IIVSNPPYIAFEDKEEVGINVLKSEPHLALFAEENGYAIYRKIIEEAGFYLKENGKLYFE 236

Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           IGY Q   +  + ES      V   +DY G DR++
Sbjct: 237 IGYKQGKVIREMLESSFPHKRVRLLQDYFGKDRMI 271


>gi|332285703|ref|YP_004417614.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
 gi|330429656|gb|AEC20990.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
          Length = 285

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 9/219 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  ILG+++F      +S     PRPETELLV++AL +    +++    R+L
Sbjct: 66  ARRLAGEPMAYILGYKEFMGRDFRVSPGVLIPRPETELLVETALDY----LQRCRAPRVL 121

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG GA+ +++   +        D+S  AL +A+ NA   G   R + L   W+ ++ 
Sbjct: 122 DLGTGAGAIAISIALNASGASIAATDVSMDALAVARQNAQALGA--RVEFLSGSWYDALV 179

Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           G   FD+IVSNPPYI +        ++R F+P  +L  G DGLS  RTI  G    L   
Sbjct: 180 GHSGFDLIVSNPPYIAACDPHLAQGDLR-FEPVQALTDGSDGLSALRTIVQGAGARLKPG 238

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
               +E G++Q   V ++ +      V + +D  G +RV
Sbjct: 239 AALFLEHGWDQAKAVRQLLQQAGFTQVASLQDLAGIERV 277


>gi|241889800|ref|ZP_04777098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gemella haemolysans ATCC 10379]
 gi|241863422|gb|EER67806.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gemella haemolysans ATCC 10379]
          Length = 280

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 134/240 (55%), Gaps = 16/240 (6%)

Query: 31  DDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           ++ +++F  + I + +K +  +  ++G+  FY+ +  ++ D   PR ETE L+   + + 
Sbjct: 50  ENEEKYF--SLIEKHIKEDVPLSHLVGFEYFYDRKYKVTKDVLSPRMETEELIYKVIEY- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD-----ISCKALEIAKSNAVTN 144
                 ++  +ILDL TG+G + + L KE    + V VD     IS +A+E+AK N+ ++
Sbjct: 107 -INTSNKNKFKILDLCTGSGIIAITLKKE---LEQVSVDVIASDISKEAIEVAKENSQSH 162

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + +F  ++SD F++++  FD+IVSNPPYI+      +   V  +DP ++L    +G+ 
Sbjct: 163 DATIKF--IKSDIFNNIDDKFDIIVSNPPYIDRKDKVTMQDNVLKYDPHLALFAEEEGMY 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            YR I +  + +LN++G+   EIGY+QK  ++++ +    +    +KD  G DR+    R
Sbjct: 221 FYRKIIEQANDYLNENGVIFFEIGYDQKDKIIKLADMNG-YSAEVYKDINGRDRMAFLVR 279


>gi|302392965|ref|YP_003828785.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetohalobium arabaticum DSM 5501]
 gi|302205042|gb|ADL13720.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetohalobium arabaticum DSM 5501]
          Length = 307

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 8/227 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           +++  K   +  I+G+++F +++  ++ D   PRPETE LV++ +       +KR+ + +
Sbjct: 65  VIQRAKRMPVAYIIGYQEFMSLKFKVNEDVLIPRPETEHLVEAVIQRVNKLADKREKLTV 124

Query: 102 LDLGTGTGAVCLALLKE---SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +DL TG+GA+ ++L KE    P     +G D+S +AL +AK NA  + V  +   L  D 
Sbjct: 125 IDLCTGSGAIIISLAKELADVPLEINYIGTDVSQEALAVAKDNAKLHQVQNQIQFLVGDL 184

Query: 158 FSSVEGLF---DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            + V+ L    D+I+SNPPYI    +  L  E++ ++P I+L  G +G+  YR I     
Sbjct: 185 LNPVKELNLKPDIIISNPPYIADKELQELEPELQ-YEPEIALKAGENGIDFYRQIISETE 243

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + L   G+   E+G  Q   V ++ E      +    DY    RV+L
Sbjct: 244 QLLTDGGIIGFEVGNQQSKSVYQLLEENNFINLTVIDDYAEVPRVIL 290


>gi|170017815|ref|YP_001728734.1| methylase of polypeptide chain release factor [Leuconostoc citreum
           KM20]
 gi|169804672|gb|ACA83290.1| Methylase of polypeptide chain release factor [Leuconostoc citreum
           KM20]
          Length = 332

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I   ++ +    ILG   FY     +      PRPETE LV   LA +       + V +
Sbjct: 110 IAMLIQQQPPQYILGHAPFYGREFIVDERVLIPRPETEQLVAWILADA--SGTTGESVSV 167

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
           LD+GTG+GA+   L+ E+P  +G   DIS  AL +A  NA    + + RF  ++SD FS 
Sbjct: 168 LDIGTGSGAIIETLMLENPRVRGFAADISSDALTVAALNAQQLNIKQLRF--VESDVFSG 225

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  L FD+IVSNPPYI S   D +   V  ++P  +L     GL+ Y+ IA+G++ HL  
Sbjct: 226 LADLRFDLIVSNPPYIASSDEDEMDASVLTYEPHDALFADNQGLAIYQKIAEGLAAHLTP 285

Query: 220 DGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260
            G    EIGY Q   VV I + +     V   +D+ G DR++
Sbjct: 286 QGRAYFEIGYKQGQQVVDIMQKALPKATVTLKQDFAGLDRMV 327


>gi|320160373|ref|YP_004173597.1| putative modification methylase HemK [Anaerolinea thermophila
           UNI-1]
 gi|319994226|dbj|BAJ62997.1| putative modification methylase HemK [Anaerolinea thermophila
           UNI-1]
          Length = 287

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 10/244 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +   P+++L D Q   L   + R L+   +  + G ++F+ +   +S     PRPETE L
Sbjct: 44  IAAHPETLLSDEQASHLNTLLGRLLEGVPLPYLTGKQEFFGLEFEVSPAVLIPRPETETL 103

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++AL + L R  +R+  R+ D+GTG+G + +++    P  + +  D S +AL++A+ N 
Sbjct: 104 VEAALQW-LKRFPERN--RVADVGTGSGCIAVSIAYHMPNVRVLATDFSHEALKVAQRNV 160

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             +GVS+R   +Q D  S+  G+FD++ +N PYI +  +D        F+P  +LDGG  
Sbjct: 161 NRHGVSDRVQLIQCDLLSACAGMFDLVCANLPYIPTSALD--ETPPARFEPIAALDGGES 218

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDR 258
           G    + +     R L   G   +EI ++Q   V  I  +R +F    +   +D    DR
Sbjct: 219 GWEKIKALLQDAPRWLVPGGCILLEIQWDQGQTVSEI--ARGIFPAAEIQILQDLAHLDR 276

Query: 259 VLLF 262
           V+L 
Sbjct: 277 VVLI 280


>gi|310644399|ref|YP_003949158.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Paenibacillus polymyxa SC2]
 gi|309249350|gb|ADO58917.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus polymyxa SC2]
          Length = 299

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 107/217 (49%), Gaps = 9/217 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P SV D  +R      I R    E    I+G ++FY     +S     PRPETELLV++ 
Sbjct: 66  PSSVKDTWERI-----IARKAAGEPAQYIIGQQEFYGRPFAVSPSVLIPRPETELLVEAI 120

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R+        LD+GTG+GA+ + L  E P +     DIS  ALEIA  NA  NG
Sbjct: 121 LQHG-DRLWPSGAPHALDIGTGSGAIAVTLAAERPRWHVAAGDISAAALEIAAQNAAANG 179

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               F   + D  +   G   D++VSNPPYI +  +  L  EVRD +PR++LDGG DGL 
Sbjct: 180 AVIEFR--EGDLLAPFAGTAVDILVSNPPYIPAADIAGLQPEVRDHEPRMALDGGPDGLG 237

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            YR + + +        L   E+G  Q  DV  + E 
Sbjct: 238 PYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLLEQ 274


>gi|319787973|ref|YP_004147448.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466485|gb|ADV28217.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 279

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 108/222 (48%), Gaps = 7/222 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  + G R F+ + L  + +T  PRPETELLV+ AL     R+   + VR+ D
Sbjct: 62  RRLAGEPVAYLTGHRGFWTLDLETTPETLIPRPETELLVELALG----RLPVDEPVRVAD 117

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162
           LGTGTGA+ LA+  E P    V  D++   L +A  NA  NGV   +   + DW  ++  
Sbjct: 118 LGTGTGAIALAIASERPLAAVVATDVAKATLAVAVRNAQANGVGNVW-FRRGDWCQALGR 176

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD++ SNPPYI          ++R  +P  +L  G DGL   RTI      HL   G 
Sbjct: 177 DRFDLVASNPPYIAEGDRHLSEGDLR-HEPARALSSGADGLDAIRTIVATAPDHLVPGGW 235

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +E GY+Q   V  + E      V   +D    DRV L  R
Sbjct: 236 LLLEHGYDQGAAVRALLEQAGFVEVATAQDLEQRDRVSLGRR 277


>gi|309792621|ref|ZP_07687082.1| modification methylase, HemK family [Oscillochloris trichoides DG6]
 gi|308225343|gb|EFO79110.1| modification methylase, HemK family [Oscillochloris trichoides DG6]
          Length = 274

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 8/223 (3%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           N + R    E +  ++G ++FY   L +      PRPETELLV+ ALA      +++   
Sbjct: 52  NLVERRATGEPVAYLVGHKEFYGYELLVDRRVLVPRPETELLVEVALAG---LGDRQAAW 108

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI DLGTG+GA+ +AL  + P  +   VD+S  ALE+A +N   + +SER   +Q D  +
Sbjct: 109 RIADLGTGSGAIAVALGLQLPHAQIEAVDLSADALEVAAANVQRHALSERVRLMQGDLCA 168

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLN 218
            + G +D+IVSNPPY    I+  +   V   +P ++L+ GG DG   YR I     +HL 
Sbjct: 169 PLAGHYDLIVSNPPY---TILAEVEPNVLAHEPHLALEGGGADGADFYRRIFATAPQHLR 225

Query: 219 KDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
             G    EIG  Q   V  + ++      V  + D  G+ RV+
Sbjct: 226 AGGAIVCEIGAWQGEIVSALAQAAFPTDEVRLYHDLAGHARVV 268


>gi|296124206|ref|YP_003631984.1| modification methylase, HemK family [Planctomyces limnophilus DSM
           3776]
 gi|296016546|gb|ADG69785.1| modification methylase, HemK family [Planctomyces limnophilus DSM
           3776]
          Length = 307

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 135/263 (51%), Gaps = 14/263 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H+  C    L +H      D  L +  R  + + + R  + E +  ++G R+F+++  +
Sbjct: 44  AHARQCHRIQLYTHY-----DEELTEEVRASMRDLVQRRARQEPVAYLVGEREFFSLSFS 98

Query: 67  LSSDTFEPRPETELLVDSALAF--SLPRIEKRDVV----RILDLGTGTGAVCLALLKESP 120
           +++D   PRP++E L+  A++     P  +   V     RI+DL TG+G + + L ++ P
Sbjct: 99  VNADVLIPRPDSETLIVEAISCLKPTPADDTASVASRSWRIVDLCTGSGCLAITLARQLP 158

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             + +  D+S KAL +A+ N   + +++R +  Q      +E    FD+IVSNPPYI + 
Sbjct: 159 TAQLIATDLSDKALAVARQNLARHSLADRVELRQGSLLEPLENEPPFDLIVSNPPYIPTA 218

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  +VR  +PR++LDGG DG+   R +    ++HL   G   +E    Q   ++  
Sbjct: 219 DIESLEEDVRRHEPRLALDGGADGMDLLRPLIAEGAKHLLPGGWMLLEFTSEQAPALMNY 278

Query: 239 FESRKLF-LVNAFKDYGGNDRVL 260
            +++  + LV   KD     RVL
Sbjct: 279 AQAQPDWSLVQVVKDLSQLPRVL 301


>gi|310829055|ref|YP_003961412.1| hemK protein [Eubacterium limosum KIST612]
 gi|308740789|gb|ADO38449.1| hemK protein [Eubacterium limosum KIST612]
          Length = 304

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 12/251 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            R+T  S  Q  V  +   + R R      I R    E +  I G ++F  +   +S D 
Sbjct: 55  ARITFYSDPQKAVSFEDAEEYRSR------IDRRALLEPVAYITGEKEFMGLVFHVSPDV 108

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             PRP+TE LV++ L   +P+I K+D    R+LDL TG+GA+ L+L    P       DI
Sbjct: 109 LIPRPDTESLVEAILERVIPQI-KQDTGKPRVLDLCTGSGAIGLSLKFFDPSAVVTLTDI 167

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEV 187
           S +AL++A  NA   G S     ++SD F  +     FD+IVSNPPYI   I+  L  ++
Sbjct: 168 SGRALKVAAENARNLGFS-NITMVESDLFKGLSKTEPFDLIVSNPPYIPDGIIPTLQRDI 226

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            D++P ++L GG+ G   Y  IA     +L K G   +E+G  Q+V V  + E++    +
Sbjct: 227 VDYEPMLALSGGVTGYDLYERIAGETGPYLRKGGAIVLEVGNAQEVRVAELLEAQGFGAI 286

Query: 248 NAFKDYGGNDR 258
               D  G  R
Sbjct: 287 TMVPDLTGAVR 297


>gi|165924032|ref|ZP_02219864.1| protein methyltransferase HemK [Coxiella burnetii RSA 334]
 gi|212219473|ref|YP_002306260.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuK_Q154]
 gi|165916517|gb|EDR35121.1| protein methyltransferase HemK [Coxiella burnetii RSA 334]
 gi|212013735|gb|ACJ21115.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuK_Q154]
          Length = 277

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 9/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L+  Q+  L+  + R LK E I  ILG ++F+++ L ++ D   PRPETE+LV+  
Sbjct: 45  PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP+ EK   +RI DLGTG+GAV LA+  E P +     D S  AL+IA+ NA  + 
Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  +  Q +W  ++    +  IV NPPYI         L+    +PR +L  G DGLS
Sbjct: 161 I-KNCNFYQGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + I      +L   G   +E GY+Q   ++ + ++     +   +D  G  R+++  R
Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276


>gi|121608525|ref|YP_996332.1| HemK family modification methylase [Verminephrobacter eiseniae
           EF01-2]
 gi|121553165|gb|ABM57314.1| modification methylase, HemK family [Verminephrobacter eiseniae
           EF01-2]
          Length = 294

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 9/215 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  + G ++FY + L + +   +PRP+TE LVD AL      I      R+LD
Sbjct: 72  RRAAGEPVAYLTGRKEFYGLPLAIDARVLDPRPDTETLVDWALEV----IAPLPAPRVLD 127

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LAL +  P    + +D S  AL +A++NA   G+  +    Q  W S    
Sbjct: 128 LGTGSGAIALALQRHCPGAWILAIDASADALAVARANAGRLGLPVQLA--QGHWLSGAPA 185

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD IVSNPPY+ +       L     +PR +L  G DGL   R+I      HL   G  
Sbjct: 186 GFDAIVSNPPYLGAQDPHLAALA---HEPRQALVSGADGLQDIRSIIGQAPGHLAAGGWL 242

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            +E G++Q   V  +  +R    V +  D  G  R
Sbjct: 243 LLEHGHDQAAAVHALLSARGFARVQSRADLAGIAR 277


>gi|296775659|gb|ADH42936.1| polypeptide chain release factor methylase [uncultured SAR11
           cluster alpha proteobacterium H17925_23J24]
          Length = 275

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 135/260 (51%), Gaps = 16/260 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  + G+   ++++D + +++  +     + I+R  K+E I  I   ++F +   
Sbjct: 25  DSEIILSHIMGVPREKLLID-ERIIEHDKIIKFKSLILRRSKNEPIAYITNNKEFRSTNF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              +++  PRPET LL+D      + +I K   +  L++G GTG +  ++LKE    KG+
Sbjct: 84  FXDNNSLIPRPETXLLIDP-----ISKIFKNKKLFFLEVGIGTGCISFSILKEIMSSKGI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
           G+DIS + L+ AK N       ++F+     +  S+E +    FD+IVSNPPY+    V+
Sbjct: 139 GIDISNRTLKNAKINL------KKFNNRIKLFRKSIEDIRNIKFDLIVSNPPYVIKREVN 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +++ ++PRI+LDGG DGL   + +       L  +G+ ++EIG  Q   V+ + +S
Sbjct: 193 RLSSDIKKYEPRIALDGGNDGLDVIKKVIYKSKYILKSNGILALEIGTGQFRSVMALLKS 252

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                    +DY  N R + 
Sbjct: 253 NNFKKKTLIRDYRDNVRCIF 272


>gi|320354564|ref|YP_004195903.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobulbus propionicus DSM 2032]
 gi|320123066|gb|ADW18612.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobulbus propionicus DSM 2032]
          Length = 286

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 13/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  +T +S   V++     +D +        I +  +   +  + G ++F+
Sbjct: 21  EAALDARLLLQHLTAMSRSDVVLHGHESVDSQTVARYRQLIEQRCQRVPLQYLTGVQEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--S 119
           ++  T+S     PRPETE +++  L           V R LD+ TG+GA+ + L +E   
Sbjct: 81  SLAFTVSPAVLIPRPETEFMLEQVLTTC----AGTTVERALDMCTGSGAIAVVLARELGR 136

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
           P    + VDIS  AL +A  N   +GV+     L  D F+++     FD+IVSNPPYI  
Sbjct: 137 PV---IAVDISEAALAVAADNVRCHGVANLVTLLCGDLFAALNPARTFDLIVSNPPYIAE 193

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++D L  EV   +PR++L GG  GL     IA+     L   G   +EIG +QK  V R
Sbjct: 194 AVIDQLEPEVAQAEPRLALSGGASGLESIARIAEAAQDFLCPGGWIFLEIGADQKHAVER 253

Query: 238 IFESRKLFL--VNAFKDYGGNDRVL 260
           +F +  L    V+   D+    RV+
Sbjct: 254 LFHAPGLAYREVSVIHDWADRPRVV 278


>gi|257092417|ref|YP_003166058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257044941|gb|ACV34129.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 274

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 19/262 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V   +  ++I +P   L   Q   L + + R    E +  +LG   FY +  
Sbjct: 18  DARLLVEHVAACTHAELISEPMRRLLAEQAQVLADLVERRAAGEPLAYLLGSAGFYGIEF 77

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV  A+      +E     RI+DLGTG+G V + +    P  +  
Sbjct: 78  QITPAVLIPRPETELLVTLAVKC----VESLAEPRIVDLGTGSGVVAVTVGCLCPAARIT 133

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI----ESVIV 180
            VD+S  AL++A+ NA  +GV   F  L  DW++ + +  FD+IV+NPPY+    E +  
Sbjct: 134 AVDLSPSALDLARINAGRHGVEATF--LVGDWYTPLGDCGFDLIVANPPYVANDDEHLQR 191

Query: 181 DCLGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           D L      F+PR++L  G+   DGL+  R I DG  RHL   G   +E GY+Q   V  
Sbjct: 192 DGL-----PFEPRMALTDGVPGGDGLACIRRITDGARRHLLPGGWLLIEHGYDQAAAVRN 246

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
                 L  V +++D    +RV
Sbjct: 247 ELHKAGLSDVASWQDLARIERV 268


>gi|330815384|ref|YP_004359089.1| HemK protein [Burkholderia gladioli BSR3]
 gi|327367777|gb|AEA59133.1| HemK protein [Burkholderia gladioli BSR3]
          Length = 282

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 127/263 (48%), Gaps = 19/263 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G S  Q+I   D      D +R+    A  R L  E + +++G R+F+ +
Sbjct: 21  DARILLAHALGWSRTQLITRADAPLAAADAERYLALAA--RRLAGEPVAQLVGSREFFGL 78

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRP+TELLV+SALA     IE      +LDLGTG+GAV +A+    P  +
Sbjct: 79  EFAVTPDVLIPRPDTELLVESALAA----IEGIAAPAVLDLGTGSGAVAVAIASMRPDAR 134

Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYI 175
              +D S  AL +A+ NA         G + RF  L+SDW+ +++ L  F  IVSNPPYI
Sbjct: 135 VQALDRSAAALAVARGNAARLLDPARPGGALRF--LESDWYGALDPLQRFHAIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                     ++R F+PR +L    DGL   R IA G    L   G   +E GY+Q   V
Sbjct: 193 ACRDPHLEQGDLR-FEPRGALTDEADGLEAIRAIAAGAPAFLLPRGALWIEHGYDQAEAV 251

Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258
             I  +     V +  D    +R
Sbjct: 252 RAILAAAGFEAVASLTDLAAIER 274


>gi|261208267|ref|ZP_05922940.1| modification methylase HemK [Enterococcus faecium TC 6]
 gi|289565644|ref|ZP_06446090.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium D344SRF]
 gi|260077524|gb|EEW65242.1| modification methylase HemK [Enterococcus faecium TC 6]
 gi|289162612|gb|EFD10466.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium D344SRF]
          Length = 290

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 59  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117

Query: 87  AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                  E  DV + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G
Sbjct: 118 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 171

Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DG
Sbjct: 172 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 227

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258
           L+ Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R
Sbjct: 228 LAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHKK---VKIKKDLFGNER 284

Query: 259 VL 260
           ++
Sbjct: 285 MI 286


>gi|332637163|ref|ZP_08416026.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella cibaria KACC 11862]
          Length = 287

 Score =  115 bits (288), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 13/242 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++VL+D +R     A VR++K  + +   LG   FY     +      PR ETE LV+  
Sbjct: 53  NTVLEDEKRLRFMVA-VRAIKGGQPVQYALGHAAFYGREFNVDRRVLIPRQETEELVEWV 111

Query: 86  L---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           L     + P      V R+LD+GTG+GA+ + +  E P +   G DIS  AL +A++NA 
Sbjct: 112 LNDHKVTGP------VQRVLDIGTGSGAIAVTIGAERPTWDVTGADISADALVVAQTNA- 164

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  +++ + ++SD FS   G +D+I+SNPPYI     D +   V  ++P ++L    +G
Sbjct: 165 -DQFAKQVNFIESDLFSQATGQYDIIISNPPYISEAERDVMDESVIMYEPDLALFADDEG 223

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L+ Y+ +A  +  +L  +G    EIGY Q   ++ +F       V   +D  G+DR++  
Sbjct: 224 LALYKQMAAQLLTYLAPNGTAYFEIGYQQGPALLAVFGELPGVSVALRQDMSGHDRMIKV 283

Query: 263 CR 264
            R
Sbjct: 284 SR 285


>gi|94988611|ref|YP_596712.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94990487|ref|YP_598587.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94992435|ref|YP_600534.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|94994409|ref|YP_602507.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|209559424|ref|YP_002285896.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131]
 gi|94542119|gb|ABF32168.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94543995|gb|ABF34043.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94545943|gb|ABF35990.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|94547917|gb|ABF37963.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|209540625|gb|ACI61201.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131]
          Length = 279

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK+NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|323127209|gb|ADX24506.1| putative methyltransferase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 279

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 117/220 (53%), Gaps = 16/220 (7%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105
           +H S   + G   F +++L++      PRPETE LVD  LA      E  D  + +LD+G
Sbjct: 64  QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ ++L KE P ++    DIS  AL +A+ NA    +   F  + SD FS + G F
Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDALSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR I +  S +L++ G    
Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235

Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY Q    K  V   F  ++   V   +D  G +R+++
Sbjct: 236 EIGYKQGEGIKALVNTHFPQKR---VRVLRDVFGKERMVV 272


>gi|294615326|ref|ZP_06695201.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1636]
 gi|294617195|ref|ZP_06696847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1679]
 gi|291591829|gb|EFF23463.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1636]
 gi|291596540|gb|EFF27781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1679]
          Length = 279

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 22/242 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 48  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106

Query: 87  AFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                  E  DV + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G
Sbjct: 107 D------ETPDVPLEVIDIGTGTGAIAISLKAARRNWHVSAVDLSEEALEVAKENAQKEG 160

Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DG
Sbjct: 161 TKISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDG 216

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDR 258
           L+ Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R
Sbjct: 217 LAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHKK---VKIKKDLFGNER 273

Query: 259 VL 260
           ++
Sbjct: 274 MI 275


>gi|94971497|ref|YP_593545.1| HemK family modification methylase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553547|gb|ABF43471.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 280

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 10/202 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D++ R+    AI R    E    I G ++FY     +S     PRPETE L+++ L  + 
Sbjct: 52  DEQARY--DEAIARRCHGEPAQYITGHQEFYGRDFLVSPAVLIPRPETEHLIEAVLELA- 108

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           PR  + +V   LD+GTG+G +   L KE P  K   VDIS +AL+IA++NA        F
Sbjct: 109 PREVRWEV---LDVGTGSGCIAATLAKEFPRMKVTAVDISPEALQIAQANAARLEAQVEF 165

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               SD  S++E    FD+IVSNPPY+     D +  +V+DF+P  ++ GG  G+   + 
Sbjct: 166 RV--SDLLSAIEPGRQFDMIVSNPPYVGECEADKVQRQVKDFEPHCAVFGGERGMDIIKR 223

Query: 209 IADGVSRHLNKDGLCSVEIGYN 230
           +A  V  HL   G   +EIGY+
Sbjct: 224 LAPQVWEHLKPGGWFLMEIGYS 245


>gi|51246577|ref|YP_066461.1| HemK methylase [Desulfotalea psychrophila LSv54]
 gi|50877614|emb|CAG37454.1| related to HemK methylase [Desulfotalea psychrophila LSv54]
          Length = 291

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 18/269 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D    L    G +  ++ + P++ +           + R ++ E +  ILG ++F++
Sbjct: 22  ALVDVQLLLGHCLGKTRTELFLYPENPVSSGSEAAFNLLLARRVQREPLAYILGEQEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SP 120
           +   ++S    PRPETE +++  LA +     +  V  +LDL TG+G + + L KE   P
Sbjct: 82  LDFKVNSHVLIPRPETEFMLEKVLASA--GAWRESVTPVLDLCTGSGVIAVVLAKELGRP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE-S 177
               V VDIS +AL++A+ NA  + V+  F  ++SD F+++E L  F +IVSNPPY+   
Sbjct: 140 V---VAVDISEEALQVARFNAHRHHVAINF--IRSDLFANIEPLHQFGLIVSNPPYVSRG 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            I   L  EV  ++P ++LDGG  DGL   R + D + ++L+  G   +E G +Q   + 
Sbjct: 195 AIAHELEPEVASYEPHLALDGGAGDGLDFIRRMRDDLPKYLSLGGEVFIEFGADQGAAIA 254

Query: 237 RIF-----ESRKLFLVNAFKDYGGNDRVL 260
            +F     +      V+  +DY   DRVL
Sbjct: 255 DLFAEPGSDGSSFTDVHVLQDYARRDRVL 283


>gi|50914206|ref|YP_060178.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|306827354|ref|ZP_07460641.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes
           ATCC 10782]
 gi|50903280|gb|AAT86995.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|304430501|gb|EFM33523.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes
           ATCC 10782]
          Length = 279

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK+NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|56808655|ref|ZP_00366380.1| COG2890: Methylase of polypeptide chain release factors
           [Streptococcus pyogenes M49 591]
          Length = 279

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK+NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|139473767|ref|YP_001128483.1| methyltransferase [Streptococcus pyogenes str. Manfredo]
 gi|134272014|emb|CAM30253.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo]
          Length = 279

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 103/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK+NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRTALDLAKANADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|300115231|ref|YP_003761806.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Nitrosococcus watsonii C-113]
 gi|299541168|gb|ADJ29485.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosococcus watsonii C-113]
          Length = 283

 Score =  115 bits (287), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 116/240 (48%), Gaps = 15/240 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L   Q       + R  + E +  I GW++F+++ L ++  T  PRPETE LV+   
Sbjct: 48  DKRLTPTQWACFQQLLQRRARGEPLAYIRGWQEFWSLNLQVTEATLIPRPETEQLVE--- 104

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +L R++      + DLGTG+GA+ LA+  E P  + +  DIS  ALE+A+SN    G+
Sbjct: 105 -LALQRLDLERAFNVADLGTGSGAIALAMGSERPRTRVIATDISAAALEVARSNGYRLGL 163

Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIES----VIVDCLGLEVRDFDPRISLDGGID 201
                 L  DWF+ + G  F +I SNPPYI      +  D L      F+P I+L     
Sbjct: 164 DNVTFRL-GDWFAPLAGERFHLIASNPPYIAEGDPHLTQDGLA-----FEPDIALIAKDK 217

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GL   R IA     +L   G   +E GY+Q   ++ +F       V  F D  G  RV++
Sbjct: 218 GLGAMRHIARAAREYLVDGGWLLLEHGYDQGPSLLALFTQLGYQQVTDFCDLAGLPRVVI 277


>gi|157370233|ref|YP_001478222.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia proteamaculans 568]
 gi|157321997|gb|ABV41094.1| modification methylase, HemK family [Serratia proteamaculans 568]
          Length = 276

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 113/218 (51%), Gaps = 8/218 (3%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           VR  + E +  ++G R+F+++ L++S  T  PRP+TE LV+ AL   LP         IL
Sbjct: 60  VRRERGEPVAYLIGEREFWSLPLSVSPATLIPRPDTECLVELALE-RLP----SSSCNIL 114

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTGTGA+ LAL  E    +  GVD+  +A+ +A+ NA    +      LQ  WF+ + 
Sbjct: 115 DLGTGTGAIALALASERQDCRVTGVDLQPEAVALAQHNAQKLAIGNA-QFLQGSWFAPLA 173

Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  F +I SNPPYI++        +VR F+P  +L     GL+    I     ++L   G
Sbjct: 174 GQTFALIASNPPYIDAADPHLAQGDVR-FEPSSALVAQQHGLADLSAIVQQAPQYLQPQG 232

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
              +E G+ Q   V  + ++     +   +DYG NDRV
Sbjct: 233 WLLLEHGWQQGESVRALLQAAGFISIATRRDYGDNDRV 270


>gi|148653569|ref|YP_001280662.1| HemK family modification methylase [Psychrobacter sp. PRwf-1]
 gi|148572653|gb|ABQ94712.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1]
          Length = 314

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 37/273 (13%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I D +  L D ++    + I +      +  + G + F+++   ++  T  PRP+TE+L
Sbjct: 40  LITDAEYKLTDAEQAHFESGIEQMRSGTPLAYLTGKQAFWSLDFFVNEHTLIPRPDTEVL 99

Query: 82  VDSALAF---SLPRIEKRDV-------------VRILDLGTGTGAVCLALLKE------- 118
           V+  LA+      +++  D               R+LDLGTG+G + ++L  E       
Sbjct: 100 VEQVLAWIDTHYAQVQNDDADDINDFNDANKLPKRLLDLGTGSGCIAISLAHELQMLAPN 159

Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVI 168
             +  ++   +D S  ALE+A+ NA  N V+   + +QSDWFS++E          FD+I
Sbjct: 160 HTASQWQVTAIDYSNPALEVARRNAALNKVT-NIEFIQSDWFSALEAANTNKESPRFDII 218

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI   + D   L+    +P  +L    +GL   + IA     +L   GL +VE G
Sbjct: 219 VSNPPYI---VDDDEHLDKLKAEPLSALVAPDNGLGDIKQIAGQARGYLVSGGLLAVEHG 275

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Y+Q   V +IF       V   +DYGGNDRV +
Sbjct: 276 YDQGAAVRQIFTDFGYTQVKTVQDYGGNDRVTM 308


>gi|288817940|ref|YP_003432287.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6]
 gi|288787339|dbj|BAI69086.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6]
 gi|308751537|gb|ADO45020.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hydrogenobacter thermophilus TK-6]
          Length = 271

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 15/264 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL----KHESIHRILGWR 58
           +LRD    L  +  +   +V +    +LD      +    +RSL    +   +  +LG  
Sbjct: 14  SLRDRELLLAHLLKVKVGEVYL----LLDRHVSKEMEEEYMRSLSLLEEGYPLQYLLGEW 69

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DFY     +      PRPETELLV+  L    P  E        ++G GTG + + LL E
Sbjct: 70  DFYGRTFRVEEGVLIPRPETELLVEKVLEKVPPNKEAVG----FEIGVGTGCISITLLLE 125

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            P       D+  KA+ +A++NA  + V +R      D F  V+G+ FD ++SNPPYI  
Sbjct: 126 RPKLIMYADDLQEKAVHLAETNARLHKVEDRLFLKVGDMFEPVKGMVFDFVISNPPYIPQ 185

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L   V+  + ++SL GG  G   Y   A  V + L +DG  ++EIG++Q   +  
Sbjct: 186 KEWAGLPKGVK-LEGKVSLIGGEKGYEFYERFAKEVGKFLKEDGFFALEIGHDQGKILED 244

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           IF S++ F    +KDY G DRV+L
Sbjct: 245 IF-SQEGFFAQVYKDYAGQDRVIL 267


>gi|291334338|gb|ADD93997.1| hemK protein [uncultured marine bacterium MedDCM-OCT-S11-C310]
          Length = 289

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 124/238 (52%), Gaps = 10/238 (4%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           V  ++V+ + QR+     + R    E +  ILG ++FY     +S     PRPETE LV+
Sbjct: 52  VPSNAVVSEFQRW-----LSRRADCEPVAYILGDQEFYGHLFQVSPAVLIPRPETEHLVE 106

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            AL +   R    D  +ILDL TG+G V L L  E P       D+S +AL +A+ NA T
Sbjct: 107 KALGWC--RDRGTDSPKILDLCTGSGCVGLTLALELPKASVTLTDLSPEALAVARHNADT 164

Query: 144 NGVSERFDTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           + V ER    + D F S+ EG  FD++++NPPY+E      +  +V D++P ++L    D
Sbjct: 165 HDVDERVRFFEGDLFESLPEGERFDLVLANPPYVEESFRGEMQKDVLDYEPHLALFAQDD 224

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           GL+  R I     ++LN+ GL ++E+G  Q    VR             +D GG+DR+
Sbjct: 225 GLNLIREIVTQSPKYLNQPGLLAMEMGSGQSAR-VRSLLGPSWKNPGIIQDLGGHDRI 281


>gi|113869290|ref|YP_727779.1| methylase of polypeptide chain release factor [Ralstonia eutropha
           H16]
 gi|113528066|emb|CAJ94411.1| methylase of polypeptide chain release factor [Ralstonia eutropha
           H16]
          Length = 274

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 8/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTGLS  Q+I      L   QR      + R L  E +  ++G R+F+  +  ++ 
Sbjct: 12  LLTHVTGLSRTQLITRDTDTLTIAQRDAFATLLARRLAGEPMAYLIGEREFFGRKFRVTP 71

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRP+TE+  +++LA    R+ +     +LDLGTG+G + + L +E    +    DI
Sbjct: 72  DVLIPRPDTEVAAEASLA----RLAEVPQPTVLDLGTGSGILAVTLARERRDAQVWATDI 127

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEV 187
           S  AL +A+ NA   G ++R   L SDW++++  GL F +IVSNPPYI +     +  ++
Sbjct: 128 SPGALMVAQDNASALG-ADRIHFLVSDWYAALPPGLRFHLIVSNPPYIAAGDPHLVEGDL 186

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R F+P  +L    DGLS  R I  G    L  DG   +E GY+Q     ++ E      +
Sbjct: 187 R-FEPIDALTDHDDGLSDLRAIVSGAGARLLPDGWLLMEHGYDQAQATRQLLEDTGFTEI 245

Query: 248 NAFKDYGGNDR 258
              +D  G +R
Sbjct: 246 FTARDLAGLER 256


>gi|156326678|ref|XP_001618669.1| hypothetical protein NEMVEDRAFT_v1g224919 [Nematostella vectensis]
 gi|156199778|gb|EDO26569.1| predicted protein [Nematostella vectensis]
          Length = 244

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 117/229 (51%), Gaps = 8/229 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S   +   P+  LD  Q      AIVR    E +  ILG + F+++ L
Sbjct: 22  DAELLLAHALGKSRSYLHTWPERELDAPQLERYQAAIVRRQAGEPVAYILGQQGFWSLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++ T  PRP+TELLV++ LA  LP         +LDLGTGTGA+ LAL  E P ++  
Sbjct: 82  EVAAHTLIPRPDTELLVETVLAL-LPATS----AALLDLGTGTGAIALALASERPAWRLT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
           GVD   +A+ +A+ N     +S   +  +S WFS + G  F +IVSNPPYI +       
Sbjct: 137 GVDRVSEAVALAERNRARLKLSNA-NFAESHWFSVLVGHRFQLIVSNPPYIAADDRHLAE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            +VR F+P  +L  G DGL   R I      +L   G   +E G++Q  
Sbjct: 196 GDVR-FEPSSALVAGADGLDDIRLIIQQAPGYLEAGGWLLLEHGFDQAA 243


>gi|237748572|ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
 gi|229379934|gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
          Length = 279

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 13/249 (5%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S  ++I   D  L   Q   L++ + R +  E +  I G R+F+ +   +  D   PR
Sbjct: 33  GFSRVKLITHSDHPLTTEQAKALSDVVSRRVCGEPVAYITGKREFFGLSFAVCPDVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETELLV+ AL   LP   K     I+D+GTG+GA+ +A+  E P       D+S KAL 
Sbjct: 93  PETELLVELALE-RLPHGGK-----IVDMGTGSGAIAIAIASERPDAHVFATDVSEKALN 146

Query: 136 IAKSNAVT--NGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A  NA+    G  +       +WF +++ +   FD+IVSNPPYI+S        ++R F
Sbjct: 147 MATHNALALLKG-KQTVHFSAGNWFYALKNVNETFDLIVSNPPYIDSKDDHLQKGDLR-F 204

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L    DGLS  + +  G   +L + G   +E GY+Q V V  +        V ++
Sbjct: 205 EPVGALTDHADGLSALKILVSGAQAYLKRGGWLLMEHGYDQAVAVRALLARAGFEEVQSW 264

Query: 251 KDYGGNDRV 259
           KD  G  RV
Sbjct: 265 KDLAGIGRV 273


>gi|86608445|ref|YP_477207.1| HemK family methyltransferase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556987|gb|ABD01944.1| methyltransferase, HemK family [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 247

 Score =  115 bits (287), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 13/219 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLG 105
            +  +LG  ++  + L ++     PRPETELLV+ A     A  LP           DLG
Sbjct: 28  PLQYLLGKVEWAGLSLRVTPAVLIPRPETELLVEQASLWLQANPLPPGSC-----FADLG 82

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162
           TG+GA+ +AL  + P  + + VD S +AL +A  N V + + ER + L   WF  ++   
Sbjct: 83  TGSGAIAIALAHQHPQLRLLAVDSSPEALAVAADNVVAHHLQERVNLLLGSWFVPLDPWR 142

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G    +VSNPPYI S  +  L  EVR  +PR +LDGG DGL+H R +      +L  +  
Sbjct: 143 GRLRGLVSNPPYIPSADLASLMPEVRLHEPRQALDGGEDGLAHLRLLIQAAPDYLAPNSF 202

Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
            +VE+   Q   V    ++R  +  +   +D  G +RV+
Sbjct: 203 WAVEVMRGQAPWVAEQLQARSCYRQIQVHRDLAGVERVV 241


>gi|189183834|ref|YP_001937619.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180605|dbj|BAG40385.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str.
           Ikeda]
          Length = 288

 Score =  115 bits (287), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 4/261 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  + G S   ++   D +L +         I    K+  I  ++G+++FY+   
Sbjct: 25  ESRLLLAHIIGQSQEYILFHSDHLLLNSDYNQFLKMIKLRTKYLPIAYLIGYKEFYSRNF 84

Query: 66  TLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +      PRP++E L+D+ +     +   +    ++IL+LG G+G + + LL E     
Sbjct: 85  IVDKSVLIPRPDSETLIDAVVQDYRKIANYQPSAPIKILELGVGSGCLIITLLLELSNAI 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
           GVG DIS  AL IA  N     + +  + +QS+WFS ++    +D+I++NPPY+    + 
Sbjct: 145 GVGSDISISALNIASRNRQKYKLEKSLNLVQSNWFSGLDVGEKYDIIIANPPYVSDSELR 204

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E    +P I+L    +GL  Y+ IA  +   LN +G   +E  YN+   V  +   
Sbjct: 205 ILSRETLLHEPHIALFSNNNGLQSYQEIAPLIPSFLNSNGRLYLECSYNKAEMVCALCFK 264

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L L N + D+    R L F
Sbjct: 265 SGLILENKYYDFNSYCRCLKF 285


>gi|302334926|ref|YP_003800133.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Olsenella uli DSM 7084]
 gi|301318766|gb|ADK67253.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Olsenella uli DSM 7084]
          Length = 524

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTGLS  Q+    D  L   +   + +A+VR    E +  + G   F ++ L    
Sbjct: 36  MLSNVTGLSRVQLYTSFDRPLSADELARMHDAVVRRGAGEPLQYVTGEMPFRHIVLHCEG 95

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE+LVD+ LA            ++L++GTGTG +  ++  E P    V  D+
Sbjct: 96  GVLIPRPETEVLVDAVLAHVDVAAAAGHDAQVLEVGTGTGCIACSIASERPGSHVVATDL 155

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGL 185
           S  A  +A  N    G++   D +  D  S V+    G FDV+VSNPPYI S +V  L  
Sbjct: 156 SPAAAALAMRNRDALGLARAVDVITCDLASGVDPALKGTFDVLVSNPPYIPSDVVPTLPR 215

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV  F+P ++LDGG DGL  +R + +     L   G+ + E           +FE+    
Sbjct: 216 EVVGFEPHLALDGGADGLDVFRRLLEVAPDMLRPGGMLACE-----------LFETNAEV 264

Query: 246 LVNAFKDYGGNDRV 259
                +  GG  RV
Sbjct: 265 AAELCRRQGGWARV 278


>gi|167587637|ref|ZP_02380025.1| modification methylase, HemK family protein [Burkholderia ubonensis
           Bu]
          Length = 280

 Score =  114 bits (286), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+ +  A  R    E + +++G R+F+  
Sbjct: 19  DARVLLAYALGWTRTQLITRGDEPLDAAAVERYLVLEA--RRAAGEPVAQLVGMREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 77  PFDVTPDVLIPRPETELLVEAALDA----IDGIPHPAVLDLGTGSGAIAVSIAAERPDAR 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              +D S +AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI  
Sbjct: 133 VWALDRSGEALAVARRNADKLLDAHRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQ 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V  
Sbjct: 193 YDPHLSQGDLR-FEPRGALTDDADGLAAIRAIVAGAGARLKPGGTLWIEHGYDQAEAVRA 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +  +     V +  D    +R 
Sbjct: 252 LLAAHGFVSVESLADLAAIERT 273


>gi|186477470|ref|YP_001858940.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phymatum STM815]
 gi|184193929|gb|ACC71894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phymatum STM815]
          Length = 283

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 130/258 (50%), Gaps = 14/258 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    G    ++I   D  LD  Q     N   R    E + +++G R+F+ +   ++ 
Sbjct: 25  LLGHALGWRRTELITRADHPLDSAQVAAFRNLETRRAAGEPVAQLIGSREFFGLDFDVTR 84

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   PRPETELLV++A+  +L     R   R+LDLGTGTGA+ +++    P  +   VD 
Sbjct: 85  DVLIPRPETELLVETAVQ-ALEEHGARS--RVLDLGTGTGAIAVSIAWSRPDARVWAVDR 141

Query: 130 SCKALEIAKSNAV------TNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
           S +AL +A+ NAV        G   RF    SDW+S+++   +F+VIVSNPPYI S    
Sbjct: 142 SEEALSVARRNAVRLLEPKRPGGDLRFAL--SDWYSALDASLVFEVIVSNPPYIASGDPH 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+PR +L    DGLS  R I       L  +G+  +E GY+Q   V  +  +
Sbjct: 200 LSQGDLR-FEPRGALTDEADGLSAIRAIVASAPARLVPNGVLWMEHGYDQAQAVRAMLAA 258

Query: 242 RKLFLVNAFKDYGGNDRV 259
           +    + +  D  G +R+
Sbjct: 259 QGFADIRSECDLAGIERI 276


>gi|289207524|ref|YP_003459590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thioalkalivibrio sp. K90mix]
 gi|288943155|gb|ADC70854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thioalkalivibrio sp. K90mix]
          Length = 283

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 120/256 (46%), Gaps = 11/256 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L   TGL +  +I          QR        R    E I  ILG R F+ + L +S 
Sbjct: 31  LLGAATGLDTSALIARGLEAPTASQRERADALCRRRETGEPIAHILGRRAFWTLDLGISP 90

Query: 70  DTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               PRPETELLV+ A+A     I+  +R   R+LDLGTG+GA+ LAL  E P  + V  
Sbjct: 91  ACLIPRPETELLVERAIAA----IDACERAHPRVLDLGTGSGAIILALKAERPAIEAVAT 146

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185
           D S  AL  A++NA   G+   F  LQ  W    +    FDVIVSNPPYI          
Sbjct: 147 DRSPDALRQARANADALGLDVAF--LQGTWLDPFKPSDAFDVIVSNPPYIAPDDPHLTRG 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++R F+PR +L     GL    TI D    HL       +E G++Q  DV    E     
Sbjct: 205 DLR-FEPREALAAPEAGLGDLYTIIDTALTHLLPGAPLLLEHGFDQARDVRVCMEQEGYR 263

Query: 246 LVNAFKDYGGNDRVLL 261
            V + +D  G++R+ +
Sbjct: 264 EVQSLRDPAGHERITI 279


>gi|77405502|ref|ZP_00782594.1| modification methylase, HemK family [Streptococcus agalactiae H36B]
 gi|77175899|gb|EAO78676.1| modification methylase, HemK family [Streptococcus agalactiae H36B]
          Length = 276

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 12/248 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +      PRPE
Sbjct: 35  STTDCLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LVD  L  S  ++E      +LD+GTG+GA+ ++L KE P +  +  DIS  AL++A
Sbjct: 95  TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N        ++SD FS++   FD+IVSNPPYI     D +G  V   +P  +L 
Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254
              +GL+ YR I +    +L   G    EIGY Q  D+  +   ++ F  N     KD  
Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVL 273


>gi|319639481|ref|ZP_07994230.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102]
 gi|317399247|gb|EFV79919.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102]
          Length = 270

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R LK E +  +LG R+FY  R  ++     PRPETE LV++ L    P+       R+ D
Sbjct: 54  RRLKGEPMAYLLGEREFYGRRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GA+ + +  E         DIS  AL+ A+ NA   G    F   Q  WF +   
Sbjct: 108 LGTGSGAIAVTVALERVDADVRASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDRP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +DVIVSNPPYIE         ++R F+P+ +L    DGLSH R I     ++L  +
Sbjct: 166 SEGRYDVIVSNPPYIEDGDEHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKAN 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G    E GY+Q   V  I        V   +D  G DRV L
Sbjct: 225 GWLLFEHGYDQGEAVRNIMLENGFAEVATEQDLAGLDRVTL 265


>gi|220932632|ref|YP_002509540.1| modification methylase, HemK family [Halothermothrix orenii H 168]
 gi|219993942|gb|ACL70545.1| modification methylase, HemK family [Halothermothrix orenii H 168]
          Length = 285

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 133/260 (51%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  +   Q+ V  D  L +++       ++   +   +  + G ++F ++  
Sbjct: 25  DAEVLLAHLLDMERIQLYVKYDLPLKNKEVEAYREMVINRARGIPVAYLTGHKEFMSLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE+LV+  +  SL + +  D   I+D+GTG+G + ++L    P  + +
Sbjct: 85  KVNRSVLIPRPETEILVEEII--SLCQAKNIDNPNIVDVGTGSGVIAVSLAHYLPGARVL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
           G+DIS KALE+A++N   + + ER   ++ +    +  +     +++VSNPPY+    + 
Sbjct: 143 GIDISDKALEVARTNIKRHNLGERVKVIKGNLLDPLIKMEKDNVNIVVSNPPYLTGNEMK 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L LEV  ++P  +LDGG DGL  YR +     + L   G+  +EIGY+Q   +  I   
Sbjct: 203 KLPLEV-TYEPSQALDGGADGLKIYRELIPRALKVLVPGGILGLEIGYHQADSIRDILSG 261

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +DY G DRV++
Sbjct: 262 LPWGDIRVLQDYSGLDRVVI 281


>gi|332970820|gb|EGK09799.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp.
           1501(2011)]
          Length = 300

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 135/273 (49%), Gaps = 25/273 (9%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  +   S   +I D    L + ++      I +      +  + G + F+++   ++ 
Sbjct: 28  WLLHILQKSPSFLITDGGYQLTEAEQAQFNTGIAQMQASTPLAYLTGKQAFWSLEFEVNE 87

Query: 70  DTFEPRPETELLVDSALAF------SLPRIEKRDVV---RILDLGTGTGAVCLALLKE-- 118
            T  PRP+TE+LV+  L +      SL  +    ++   ++LDLGTG+G + ++L  E  
Sbjct: 88  YTLIPRPDTEVLVEQVLDWITQHKNSLSVLNDEPILAPYQLLDLGTGSGCIAISLAHELA 147

Query: 119 ---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVI 168
                 ++   +D S +AL +AK NA  N VS     LQSDWFS++       + LFD+I
Sbjct: 148 TIYPKQWQVTALDFSTEALAVAKRNAQLNAVS-NIQFLQSDWFSALKRSEDTDQPLFDII 206

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI   + +   L+    +P  +L    +GL   + I +    +L + GL +VE G
Sbjct: 207 VSNPPYI---VDNDQHLDKLKAEPLSALVAPDNGLGDIKQIVEQARDYLVRGGLLAVEHG 263

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Y+Q   V ++F       V   KDYGGNDRV L
Sbjct: 264 YDQGELVCQMFTDFGYAQVKTLKDYGGNDRVTL 296


>gi|160893850|ref|ZP_02074633.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50]
 gi|156864502|gb|EDO57933.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50]
          Length = 292

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 3/215 (1%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  I G + F       + D   PR +TE+LV+ A    L +    D + +LD+  
Sbjct: 77  KRIPLQYITGIQCFMGYDFETAPDVLIPRFDTEVLVEQA--NRLIQDIHSDKMSVLDMCC 134

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + L++   +        DIS  A+ +   NA    VS+ +  ++SD F  ++  +D
Sbjct: 135 GSGCIGLSVALMNQDIHIDLCDISDSAIALTTKNAKRLEVSD-YTVIKSDLFDKIDKRYD 193

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +I+SNPPYIES ++D L  EVRD++PR++LDG  DGL  YR I +    +LN+ G    E
Sbjct: 194 MILSNPPYIESKVIDGLMPEVRDYEPRLALDGDADGLKFYRAIIENAESYLNEKGYILFE 253

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           IG +Q  DV ++   +    V   KD   NDRV++
Sbjct: 254 IGNHQAHDVQQLLVDKHFEDVRVVKDLAENDRVVI 288


>gi|241664383|ref|YP_002982743.1| modification methylase, HemK family [Ralstonia pickettii 12D]
 gi|240866410|gb|ACS64071.1| modification methylase, HemK family [Ralstonia pickettii 12D]
          Length = 300

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 122/258 (47%), Gaps = 11/258 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TE+LV+ A    L R+E+RD   +LD+GTG+G + +++       +  
Sbjct: 91  KVTPAVLIPRPDTEVLVEQA----LDRLEERDAPAVLDMGTGSGIIAISIALARRDARVW 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180
             D S  AL +A  NA   G +     L  DW+ ++ G      FD+I SNPPYI +   
Sbjct: 147 ATDASADALAVAIDNAKALGATNVQAAL-GDWYGALAGTDAPPAFDLIASNPPYIAATDA 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGL H R+I  G    L   G   VE GY+Q   V  +  
Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264

Query: 241 SRKLFLVNAFKDYGGNDR 258
                 V   +D  G+DR
Sbjct: 265 GAGFANVFTAQDLAGHDR 282


>gi|295109134|emb|CBL23087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus obeum A2-162]
          Length = 290

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 118/244 (48%), Gaps = 13/244 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  +D +          +  +H  +  I G   F      +      PR +TE+LV++AL
Sbjct: 47  DETVDGKTEARYLEMCKKRAQHIPLQHITGRAFFMGYEFFVDERVLVPRQDTEVLVETAL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 +++    +ILD+ TG+G + L+ L E     G GVDIS  AL +AK N V   +
Sbjct: 107 T----HLKECRAPKILDMCTGSGCILLSFLMERTDAVGTGVDISEGALAVAKQNRVHLQL 162

Query: 147 SERFDTLQSDWFS---------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            +R + +QSD FS         +    +D+++SNPPYI S  +  L  EVR  DP ++LD
Sbjct: 163 EDRAEFVQSDLFSGDYFKKNSGNTVTEYDMLISNPPYIPSGEIPGLMEEVRSHDPVLALD 222

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           G  DGL  YR I     ++L   G    EIG +Q   V +I ++     V   +D  G D
Sbjct: 223 GKEDGLFFYREITAQADKYLRAGGWLMYEIGCDQGESVSKIMKTDNFINVEVIQDLAGLD 282

Query: 258 RVLL 261
           RV++
Sbjct: 283 RVVI 286


>gi|40062806|gb|AAR37690.1| modification methylase, HemK family [uncultured marine bacterium
           440]
          Length = 279

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 132/238 (55%), Gaps = 9/238 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G+    +I + +  + ++       AI R +K E +  I+G ++F++   
Sbjct: 25  DAQIILSDIMGMKREFLITNNEINISEKVMKKYDIAIKRRIKREPVAYIIGKKEFWSQDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +++ T  PRPE+ELL+   +++     E R +  ILD+GTG+G + L+LLKE P  +G+
Sbjct: 85  RVNNSTLIPRPESELLIYKLVSY----FENRRI-NILDIGTGSGCILLSLLKELPLTRGI 139

Query: 126 GVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+DIS KA++ AKSN+    +    +F  +  D F+   G +D+IV+NPPYI    +  L
Sbjct: 140 GIDISAKAVKTAKSNSKKLNLFFRSKFKVVDIDNFNI--GRYDLIVANPPYIALKDMKNL 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             ++ +++P I+L GG DGL   + +       L  +GL  +E+G NQ V   +I + 
Sbjct: 198 SKDILNYEPLIALKGGYDGLDLIKKVIYKSKHLLKANGLLGIEVGTNQYVQASKILKK 255


>gi|319795451|ref|YP_004157091.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Variovorax paradoxus EPS]
 gi|315597914|gb|ADU38980.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Variovorax paradoxus EPS]
          Length = 282

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 12/256 (4%)

Query: 6   DSHSFLCRVTGLSSHQ---VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L    G + H    ++      + D     L   + R L  E +  +LG ++F+ 
Sbjct: 26  DAQLLLLHALGRAPHDRAWLLAHDTDAMSDAAWVALAAQLSRRLTGEPVAYLLGTKEFHG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + +    PRP+TE LVD    ++L  +E R+  R+LDLGTG+GA+ LAL    P  
Sbjct: 86  LDLQVDARVLVPRPDTETLVD----WALQCLEDRNAPRVLDLGTGSGAIALALQHARPDA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD S  AL +A++NA   G+  RF    + W       +  I SNPPYI +   + 
Sbjct: 142 QVDAVDASADALAVAEANARRLGLPVRFAL--AHWLDGAADGYTAIASNPPYIAA---ND 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             L     +P  +L  G DGL   R I      HL + G   +E G++Q   V ++ E R
Sbjct: 197 PHLPALRHEPSSALVAGADGLDDIRQIVQNAPDHLAEGGWLLLEHGHDQAAAVRQLLEYR 256

Query: 243 KLFLVNAFKDYGGNDR 258
               V +  D  G  R
Sbjct: 257 GFAEVQSRDDLAGIQR 272


>gi|296282002|ref|ZP_06860000.1| HemK family modification methylase [Citromicrobium bathyomarinum
           JL354]
          Length = 292

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 26/266 (9%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H+  C  + +  H +    D V D     F      R L HE +  I G  +FY   L 
Sbjct: 36  AHALGCSRSAMLLHHMR---DPVPDGFAPLF-----ARRLGHEPVAYITGSAEFYGFELK 87

Query: 67  LSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           ++     PR ++E L+D+A   F      +R    ILDLGTG+GA+ LA L + P  +G+
Sbjct: 88  VTPAVLIPRGDSETLIDAAQEHFGTGEPPQR----ILDLGTGSGALLLAALYQWPEAEGI 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIE--SVI 179
           G+D S  AL +A+ NA   G++ER   L+  W    +    G FD+++ NPPY+E  + +
Sbjct: 144 GLDASMPALRVAQCNARKLGLAERARFLRRSWRRDGWQRDLGTFDLVLCNPPYVEDDASL 203

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             C    VR+ +P  +L  G +GL  YR +   ++  L  DG+   EIG  Q   V  + 
Sbjct: 204 DPC----VREHEPGSALFAGPEGLDDYRILLPQIAPLLTPDGIAIFEIGGTQHEAVAALA 259

Query: 240 ESRKLFLVNAF-KDYGGNDRVLLFCR 264
           +++   L NA  +D  G+ R ++  +
Sbjct: 260 QNQG--LENAMRRDLNGHPRAMIMSQ 283


>gi|71892128|ref|YP_277860.1| N5-glutamine methyltransferase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796234|gb|AAZ40985.1| N5-glutamine methyltransferase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 278

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 131/257 (50%), Gaps = 10/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L +VT  S  Q++   +S+L+      L + I R  K E I  ++G ++F+++ 
Sbjct: 22  RDAEIILGQVTKKSRAQLLAFGESLLEYDTIIQLKSLIYRRKKGEPIAYLVGSKEFWSLD 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  TF PRP+TE LV     F L ++   +V   LDLGTG G + LAL  E P +  
Sbjct: 82  LKVSPGTFIPRPDTECLVKH--VFDLLKVSHLNV---LDLGTGVGTIALALASERPNWNI 136

Query: 125 VGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            G+D   KAL +A  N  + N  + +F  +  DWF  +    F++IVSNPPYI+     C
Sbjct: 137 TGIDCQKKALFLAHKNKLLLNFKNVKF--IYGDWFKYLRNKKFNLIVSNPPYIDKN-DSC 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L      F+P+ +L     GL     I    ++HL ++G   +E G+NQ   +  +F   
Sbjct: 194 LQFRDMIFEPKNALVSKQKGLEDLTVICKYSTQHLRQNGWLVLEHGWNQGNYMRALFFKF 253

Query: 243 KLFLVNAFKDYGGNDRV 259
               ++  +DY   +RV
Sbjct: 254 GFTHIHTIRDYHHYERV 270


>gi|170728013|ref|YP_001762039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella woodyi ATCC 51908]
 gi|169813360|gb|ACA87944.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella woodyi ATCC 51908]
          Length = 280

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD  L   Q    T  + R +    I  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 46  PDERLTSEQIDDYTKMVGRRVIGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETA 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L      +  ++LDLGTGTGA+ L+L  E P ++   VD   +A+ +AK+N     
Sbjct: 106 LNLPL-----AEAAKVLDLGTGTGAIALSLAYEKPSWQITAVDKIIEAVALAKANRSHLK 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  D +QSDWF SV    F++IVSNPPYI+         +VR F+P  +L     G +
Sbjct: 161 LPQ-VDIIQSDWFDSVNCYDFNLIVSNPPYIDEEDSHLEEGDVR-FEPHSALTAPEHGFA 218

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IAD    +L   G   +E G+ Q + +           V   +D+G NDR  L
Sbjct: 219 DLYHIADCARDYLAPGGYLLLEHGFGQALQLRDKMIELGYENVATVRDFGSNDRCTL 275


>gi|123965585|ref|YP_001010666.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9515]
 gi|123199951|gb|ABM71559.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9515]
          Length = 289

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 9/230 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D   FF    +  ++  + +  I  WR   N++L +S     PRPETEL+V+     S  
Sbjct: 59  DSLEFFWGKHLSTNIPIQYLSGICYWR---NLKLEVSDKVLIPRPETELVVE---IISRK 112

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +  +   DLGTG+GA+ ++L  E+P + G+  DI+  A+EIA  N   N       
Sbjct: 113 FDNNKGQIIFADLGTGSGAISISLALENPSWNGIATDINKNAVEIASRNFANNSNQSNLK 172

Query: 152 TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               +W+   + ++G  D  V+NPPYI     + L +EV++F+P+ +L GG DGL H R 
Sbjct: 173 FYSGNWWEPLTYLKGEIDFAVANPPYIPKNTYEELPIEVKNFEPKNALLGGEDGLDHVRE 232

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           I      +L + G   +E  ++Q   V ++F   +   V   KD  G  R
Sbjct: 233 IVKYAPLYLKEKGWLLIENHFDQGARVKQLFIENQFTDVEVLKDLSGIGR 282


>gi|76786890|ref|YP_329783.1| HemK family modification methylase [Streptococcus agalactiae A909]
 gi|77408686|ref|ZP_00785419.1| modification methylase, HemK family [Streptococcus agalactiae COH1]
 gi|76561947|gb|ABA44531.1| modification methylase, HemK family [Streptococcus agalactiae A909]
 gi|77172734|gb|EAO75870.1| modification methylase, HemK family [Streptococcus agalactiae COH1]
          Length = 276

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 12/248 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +      PRPE
Sbjct: 35  STTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPE 94

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LVD  L  S  ++E      +LD+GTG+GA+ ++L KE P +  +  DIS  AL++A
Sbjct: 95  TEELVD--LILSENKVED---CSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLA 149

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N        ++SD FS++   FD+IVSNPPYI     D +G  V   +P  +L 
Sbjct: 150 KENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALF 207

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254
              +GL+ YR I +    +L   G    EIGY Q  D+  +   ++ F  N     KD  
Sbjct: 208 ADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLL--KRYFPNNRCRVLKDIF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVL 273


>gi|148657628|ref|YP_001277833.1| HemK family modification methylase [Roseiflexus sp. RS-1]
 gi|148569738|gb|ABQ91883.1| modification methylase, HemK family [Roseiflexus sp. RS-1]
          Length = 285

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  +V+   +    D         I+R    E +  ++G ++FY +  
Sbjct: 31  DAEVLLAHTLGWSRARVLSRLEEPFTDESLHQFRTLILRRAAREPVAYLVGRKEFYGLEF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE LVD+AL ++  R      + I D+GTG+G + +AL    P     
Sbjct: 91  VVDRRVLVPRPETETLVDAALEWAKHRPAP---LVIADIGTGSGCIAVALAVHLPQAHIY 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            +D+S  AL +A+ N + + V      L  D  + +    D++VSNPPY    +++ +  
Sbjct: 148 AIDLSRDALAVARQNVIRHHVDASVTLLNGDLLAPLPQPVDLLVSNPPY---TVLNEVDP 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            VR  +P ++LDGG DGL+ YR +       L   G   +EIG  Q   VV +  +R+ F
Sbjct: 205 GVRMHEPHLALDGGSDGLAVYRRLFAAAPSALRPGGALMLEIGATQARAVVDL--ARQAF 262

Query: 246 ---LVNAFKDYGGNDRVLL 261
              ++   +D  G DRV++
Sbjct: 263 PEAVIRVRQDLAGRDRVVI 281


>gi|288554406|ref|YP_003426341.1| modification methylase, HemK family protein [Bacillus pseudofirmus
           OF4]
 gi|288545566|gb|ADC49449.1| modification methylase, HemK family protein [Bacillus pseudofirmus
           OF4]
          Length = 293

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 115/222 (51%), Gaps = 21/222 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+++FY  R  ++ D   PRPETE L++  L      +     V +LD+G G+GA
Sbjct: 76  VQHLMGYQEFYGRRFQVNGDVLIPRPETEELIEHVLHLK-QSLWGDASVDVLDVGAGSGA 134

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDV 167
           + + L  E    K   VDIS +ALEIA+ NA T  +  +    +SD  S+   +E  FD+
Sbjct: 135 IGVTLALECAEMKVEAVDISKEALEIARLNAET--LDAKMSFFESDLLSTPIQMEKRFDI 192

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI     D L + VR+ +P ++L GG DG   YR +   + + + + GL + E+
Sbjct: 193 IVSNPPYIPLGEHDELAVHVREHEPHLALFGGEDGYELYRRLTTELPKVMKEKGLIAFEV 252

Query: 228 GYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLL 261
           G  Q        E+ +L L  AF         D  G DR++ 
Sbjct: 253 GAGQG-------ETVRLMLETAFPNAETEVKLDINGKDRMVF 287


>gi|288574778|ref|ZP_06393135.1| modification methylase, HemK family [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570519|gb|EFC92076.1| modification methylase, HemK family [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 282

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 107/231 (46%), Gaps = 10/231 (4%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            +  A+ R    E +H ILG   F+   L++ S T  PRPETE LV+ AL +        
Sbjct: 58  LMKEAVFRRKGREPLHYILGSCPFWGKTLSVRSGTLIPRPETEFLVEVALNYF------- 110

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D    +D GTG+G +  A+L + P    + VD    A+E+A  N    G   R       
Sbjct: 111 DGGTFVDWGTGSGCITCAILSDRPDASCIAVDSEASAIEVAYGNLRREGFLNRCLLWHGS 170

Query: 157 WFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              S+    G  D+IVSNPPYI S  V  L  EV  ++PR +LDGG DGL  YR +    
Sbjct: 171 TPESIPVASGTVDLIVSNPPYIPSEDVPSLMPEVARYEPRSALDGGRDGLDPYRMLLPWA 230

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            R L   GL  VE G   +V  +       + L+    D  G  R++ + R
Sbjct: 231 KRTLRPGGLLWVEFGGADQVRPLEEMAPSGMSLLEVRNDLSGIPRLMGWRR 281


>gi|69249627|ref|ZP_00605025.1| Modification methylase HemK [Enterococcus faecium DO]
 gi|257880057|ref|ZP_05659710.1| modification methylase HemK [Enterococcus faecium 1,230,933]
 gi|257882293|ref|ZP_05661946.1| modification methylase HemK [Enterococcus faecium 1,231,502]
 gi|257891148|ref|ZP_05670801.1| modification methylase HemK [Enterococcus faecium 1,231,410]
 gi|257893962|ref|ZP_05673615.1| modification methylase HemK [Enterococcus faecium 1,231,408]
 gi|68194106|gb|EAN08646.1| Modification methylase HemK [Enterococcus faecium DO]
 gi|257814285|gb|EEV43043.1| modification methylase HemK [Enterococcus faecium 1,230,933]
 gi|257817951|gb|EEV45279.1| modification methylase HemK [Enterococcus faecium 1,231,502]
 gi|257827508|gb|EEV54134.1| modification methylase HemK [Enterococcus faecium 1,231,410]
 gi|257830341|gb|EEV56948.1| modification methylase HemK [Enterococcus faecium 1,231,408]
          Length = 290

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 20/241 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 59  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 117

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P +     + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G 
Sbjct: 118 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 172

Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DGL
Sbjct: 173 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 228

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259
           + Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R+
Sbjct: 229 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNERM 285

Query: 260 L 260
           +
Sbjct: 286 I 286


>gi|160946321|ref|ZP_02093530.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270]
 gi|158447437|gb|EDP24432.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270]
          Length = 266

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 133/255 (52%), Gaps = 10/255 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +TG  S ++ +D    +D     FL   I +  ++  +  I G  +FY + L +   
Sbjct: 20  LEYLTGKKSVELKMDLRFCVDSIYNDFLE-IIEKRKQNYPLQYIFGKWEFYGLELFVDES 78

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE+LVD  +  +     K+D  +ILD+G G+GA+ LAL K        GVDIS
Sbjct: 79  ALIPRFETEILVDEIVKLNC----KKD--KILDIGCGSGAISLALAKNLYKSYIYGVDIS 132

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +A+ ++  N     + +     +SD FS V E  FD+IVSNPPYI+   +  L  E+  
Sbjct: 133 KEAINLSNKNKEKLNL-QNIKFFESDIFSKVDEKHFDIIVSNPPYIDDAEMKTLEKEL-S 190

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P+ +L GG DGL  YR I      +L++ G+ + EIGYNQ   +  +       ++ A
Sbjct: 191 FEPQNALYGGQDGLFFYREIIINSLDYLSEKGVLAFEIGYNQMEIISNLLIENGFEILIA 250

Query: 250 FKDYGGNDRVLLFCR 264
            KD+ G DR+L+  R
Sbjct: 251 KKDFAGFDRILIAKR 265


>gi|148238860|ref|YP_001224247.1| protoporphyrinogen oxidase [Synechococcus sp. WH 7803]
 gi|147847399|emb|CAK22950.1| Protoporphyrinogen oxidase [Synechococcus sp. WH 7803]
          Length = 299

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 114/227 (50%), Gaps = 13/227 (5%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-- 101
           +H  +  ++G   WRD   V L +S     PR ETELL+D AL    P  E   + +   
Sbjct: 73  EHVPLQHLVGRCPWRD---VELQVSPAALIPRQETELLIDLALQCLKPS-ESEALPQAGV 128

Query: 102 -LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             DLGTG+GA+ +AL +  P ++G  VD+S +ALE+A++N  +   S  +   Q  W+  
Sbjct: 129 WADLGTGSGALAVALARSLPGWEGHAVDLSAEALELARANLRSLAPSPCWTLHQGSWWEP 188

Query: 161 VE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +E   G   ++VSNPPYI  V V  L   VRD +P ++L GG DGL   R +  G  R L
Sbjct: 189 LEPWWGTVHLVVSNPPYIPRVQVQGLEPVVRDHEPHLALSGGDDGLDCCRALISGAPRAL 248

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              G   +E  ++Q   V+ +     L  V A  D  G  R  L  R
Sbjct: 249 APGGWLLLEHHHDQSEAVLVLLRDAGLEAVQARPDLQGVMRFALARR 295


>gi|237737786|ref|ZP_04568267.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419666|gb|EEO34713.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 378

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 17/232 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEKRDVV 99
           + R  + + +  +LG  +FY     +      PR +TE+LV+    L   LP        
Sbjct: 151 VARGKERKPLQYLLGEWEFYGYPFKVDERVLIPRADTEILVEQCKYLVNELPS------P 204

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-------SERFDT 152
           +I+D+GTG+GA+ ++L KE P    +G+DIS  ALE+A  N   N         S+ F  
Sbjct: 205 KIMDIGTGSGAIAISLAKELPNTHVLGLDISEGALEVATQNRDINEATNVKFLKSDVFSI 264

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           L+ + + +V+  F++IVSNPPYI +     L  EV  ++P+ +L    DG   Y  I+  
Sbjct: 265 LRDEKYKNVK--FNLIVSNPPYIPTEEYVELMPEVLKYEPKNALTDNGDGYYFYEKISKE 322

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               L KDG    E+GYNQ   V          +++  KDYGG DRV++  R
Sbjct: 323 AKEFLTKDGYLVFEVGYNQAEKVADFMRENGFDVLSIVKDYGGIDRVVIGKR 374


>gi|293567648|ref|ZP_06678991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1071]
 gi|291589583|gb|EFF21388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1071]
          Length = 279

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 20/241 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 48  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P +     + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G 
Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHVSAVDLSEEALEVAKENAQKEGT 161

Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DGL
Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259
           + Y  IA      L  +G   +EIG+ Q   V +IF+     +K+ +    KD  GN+R+
Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKKVAIK---KDLFGNERM 274

Query: 260 L 260
           +
Sbjct: 275 I 275


>gi|322411679|gb|EFY02587.1| putative methyltransferase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 279

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 116/220 (52%), Gaps = 16/220 (7%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105
           +H S   + G   F +++L++      PRPETE LVD  LA      E  D  +  LD+G
Sbjct: 64  QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSALDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ ++L KE P ++    DIS  AL +A+ NA    +   F  + SD FS + G F
Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDALSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR I +  S +L++ G    
Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235

Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY Q    K  V   F  ++   V   KD  G +R+++
Sbjct: 236 EIGYKQGEGIKALVNIHFPQKR---VRVLKDVFGKERMVV 272


>gi|74318512|ref|YP_316252.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
 gi|74058007|gb|AAZ98447.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
          Length = 287

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 111/219 (50%), Gaps = 8/219 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L  E I  I+G R+FY  R  +S     PRPETELLV+ ALA    RI   +   +
Sbjct: 69  LARRLGGEPIAYIVGAREFYGRRFEVSPAVLIPRPETELLVELALA----RIPPDETTTV 124

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + + L  E    +   V+ S  AL +A+ NA T G S  F     DWFS +
Sbjct: 125 LDLGTGSGCIAITLALERSRARVTAVERSPAALALARRNAQTLGASVEFSA--GDWFSDL 182

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  +D+IV+NPPYI          ++R  +P  +L  G DGL   R + DG   HL + 
Sbjct: 183 TGRSYDLIVANPPYIADADPHLARGDLR-HEPVAALASGADGLDELRRLIDGARDHLRRP 241

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G+  +E GY+Q   V  +  S        + D  GN RV
Sbjct: 242 GMLLLEHGYDQADAVHALLRSGGFARPRCWHDLAGNPRV 280


>gi|332522646|ref|ZP_08398898.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332313910|gb|EGJ26895.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 276

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 103/182 (56%), Gaps = 7/182 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   I G   F ++ LT++     PRPETE LV   LA +     +R+ +++LD+GTG+G
Sbjct: 67  SPQYITGKAYFRDLILTVNESVLIPRPETEELVALILAEN-----EREDLQLLDIGTGSG 121

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ ++L KE P +K V  DIS +A+++A+ NA        F   QSD FSS+ G FD+IV
Sbjct: 122 AIAISLKKERPTWKVVASDISQEAIQVAQFNAWNMETEITFR--QSDLFSSLSGKFDIIV 179

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI       +G  V   +P ++L     GL+ YR+I +    +L+  G    EIGY
Sbjct: 180 SNPPYIAFADKKEVGRNVLVSEPHLALFAEEGGLAMYRSILEQAEHYLSPQGKIYFEIGY 239

Query: 230 NQ 231
            Q
Sbjct: 240 KQ 241


>gi|258614611|ref|ZP_05712381.1| hemK protein [Enterococcus faecium DO]
 gi|260560330|ref|ZP_05832506.1| modification methylase HemK [Enterococcus faecium C68]
 gi|293563061|ref|ZP_06677527.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1162]
 gi|294623634|ref|ZP_06702472.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium U0317]
 gi|314947686|ref|ZP_07851095.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0082]
 gi|260073675|gb|EEW62001.1| modification methylase HemK [Enterococcus faecium C68]
 gi|291596960|gb|EFF28173.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium U0317]
 gi|291604975|gb|EFF34443.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1162]
 gi|313645927|gb|EFS10507.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0082]
          Length = 279

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 20/241 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 48  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P +     + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G 
Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 161

Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DGL
Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259
           + Y  IA      L  +G   +EIG+ Q   V +IF+     +K   V   KD  GN+R+
Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDKK---VAIKKDLFGNERM 274

Query: 260 L 260
           +
Sbjct: 275 I 275


>gi|91081733|ref|XP_972117.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Tribolium castaneum]
          Length = 328

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 9/204 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D VLD+ +   + +  ++ L+   +  +LG   F  + L +S   F PRPETE LVD  L
Sbjct: 89  DMVLDEDRVKLVESLCLKRLQKLPVQYVLGECYFRQLVLKMSPPVFIPRPETEQLVDIVL 148

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 I++++    L+L  G+GA+ L+LL+E P  KG  +D S  A  + K NA   G+
Sbjct: 149 G----EIDRKNCRHFLELCCGSGAIALSLLQERPQIKGTALDQSKAACHLTKENAQKAGL 204

Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           ++R   +QS    W    +  FD+IVSNPPY+ S  +D L  E++ ++   +LDGG+DGL
Sbjct: 205 NKRIRIIQSQLAQWHRCEK--FDIIVSNPPYVFSKDLDKLQPEIKLYEDLQALDGGVDGL 262

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI 227
              + I +  S  LN +G   +E+
Sbjct: 263 KVIKQILELSSECLNMNGKLFLEV 286


>gi|19746089|ref|NP_607225.1| protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232]
 gi|19748261|gb|AAL97724.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS8232]
          Length = 279

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKVNADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|327484700|gb|AEA79107.1| Methylase of polypeptide chain release factor [Vibrio cholerae
           LMA3894-4]
          Length = 256

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 117/234 (50%), Gaps = 13/234 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       +K  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------DKAALIDGELLDLGTGTGAIALALASELPTRQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVD 181
             G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE     
Sbjct: 140 VTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDPH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V
Sbjct: 199 LSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAV 251


>gi|317487379|ref|ZP_07946169.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia
           3_1_6]
 gi|316921375|gb|EFV42671.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia
           3_1_6]
          Length = 315

 Score =  114 bits (284), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 38/282 (13%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G+S  ++   P++ L   Q   +T  + R    E    +LG R+FY     ++ 
Sbjct: 32  ILQHVCGISRVELATRPETFLTSDQLSRMTGLLRRRADGEPAAYLLGQREFYGRDFRVTP 91

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRPETE L+++AL                DLGTG+G + + L  E P ++G+ VD+
Sbjct: 92  ATLIPRPETEHLIEAALKGC------DGPASFADLGTGSGCIAVTLCAERPDWRGLMVDL 145

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187
           S +AL +A  NAV + V +R   +++D+   +      D++VSNPPY+     + L  EV
Sbjct: 146 SGRALAVACQNAVRHDVRQRLQPVRADFTRPLLRPESLDLLVSNPPYVGKTEYEGLSAEV 205

Query: 188 RDFDPRISL------------------------------DGGIDGLSHYRTIADGVSRHL 217
           RDF+P  +L                                  +GL H   +A      L
Sbjct: 206 RDFEPVTALVPNFVDSDKIPSHDHHHDHGGSHSHVPSTPPDKPEGLEHLIAVAQEAFVAL 265

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
              GL  +E GY Q   +  + ES K   V   KD  G+DRV
Sbjct: 266 KPGGLLLMEHGYAQGAAIKVLLESHKWENVLILKDLSGHDRV 307


>gi|294787799|ref|ZP_06753043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Simonsiella muelleri ATCC 29453]
 gi|294484092|gb|EFG31775.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Simonsiella muelleri ATCC 29453]
          Length = 276

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  +TG +  Q+I     +L ++Q   L     R  + E +  +LG R+FY    
Sbjct: 18  ESRMLLQHITGYTRAQLITHDQEILTEQQINQLNTLAKRREQGEPMAYLLGTREFYGREF 77

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+S     PRPETE L+++AL     R+ +  V  + DLGTG+G + ++   E       
Sbjct: 78  TVSPAVLIPRPETEHLLEAALL----RLPENGV--LWDLGTGSGILGISTKLERKDSLVF 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI 179
             D+S  AL++A+ NA   G    F   Q  WF +       E   DV+VSNPPYI++  
Sbjct: 132 ASDLSADALQVAQQNAQHLGADVAF--AQGSWFDAARVFRLPENSVDVLVSNPPYIKNND 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +     ++R F+P+ +L    DGL+H R +      +L  +G   +E GYNQ V + ++F
Sbjct: 190 LHLNQGDLR-FEPQTALTDFSDGLAHIRILIKNGKIYLKPNGWLLLEHGYNQAVAIRQLF 248

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
                 ++    D  G DR+
Sbjct: 249 TQHGYQMIETQPDLAGLDRI 268


>gi|239907763|ref|YP_002954504.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
 gi|239797629|dbj|BAH76618.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
          Length = 301

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +  GL    +I+  D  L   +   +   + R  K E +  ILG R+FY +   ++ 
Sbjct: 48  LLSQALGLDRLGLILAMDRPLTPEELDLVRPLVARRGKGEPVAYILGEREFYGLDFAVTP 107

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRPETEL++D +L          ++    DLGTG+G + + L    P   G+ +D+
Sbjct: 108 ATLIPRPETELIIDRSLEL----FPAGELTSFADLGTGSGCLAVTLAVRFPGATGLALDL 163

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S +AL +A+ NAV + V++R    ++D+    +  EG + ++VSNPPY+ +        E
Sbjct: 164 SPEALAVARQNAVRHQVAQRLTFFEADFADLPAHGEG-YGLVVSNPPYVSAAEYRECSRE 222

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           VR+F+P  +L  G  GL    T+A      L   G   VEIG+ Q
Sbjct: 223 VREFEPSSALTPGETGLEAVPTVARAALSRLAPGGTLLVEIGWKQ 267


>gi|330823523|ref|YP_004386826.1| protein-(glutamine-N5) methyltransferase [Alicycliphilus
           denitrificans K601]
 gi|329308895|gb|AEB83310.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans K601]
          Length = 281

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/216 (34%), Positives = 107/216 (49%), Gaps = 9/216 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R    E +  + G ++FY + L + +   +PRP+TE+LVD AL    P    R    + 
Sbjct: 63  ARRAAGEPVAYLTGSKEFYGLPLRVDARVLDPRPDTEILVDWALELLAPLPAPR----VA 118

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL    P  + + VD S  AL +A++NA   G+  RF  +Q+DW + + 
Sbjct: 119 DLGTGSGAIALALQHARPDARVLAVDASAGALAVARANAERLGLPVRF--VQADWLAGIA 176

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD IVSNPPYI +       L     +P  +L  G DGL   R IA      L   G 
Sbjct: 177 GPFDAIVSNPPYIPAQDPHLAALA---HEPLSALASGADGLDDIRAIAAQAPALLAPGGW 233

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +E G++Q   V  +  +  L  V +  D  G  R
Sbjct: 234 LLLEHGWDQAGAVQALLRAAGLARVQSRDDLAGIAR 269


>gi|24379521|ref|NP_721476.1| putative protoporphyrinogen oxidase [Streptococcus mutans UA159]
 gi|290580478|ref|YP_003484870.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025]
 gi|24377462|gb|AAN58782.1|AE014946_7 putative protoporphyrinogen oxidase [Streptococcus mutans UA159]
 gi|254997377|dbj|BAH87978.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025]
          Length = 278

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 7/216 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H     I G   F ++ L++      PRPETE LV       L   + R   ++LD+GT
Sbjct: 65  QHIPAQYITGKAYFADLILSVDERVLIPRPETEELV----KLILKENQHRSSAKLLDIGT 120

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ LAL K  P ++    DIS  AL +A+ NA  N  +  F  LQSD FS +   +D
Sbjct: 121 GSGAIALALAKAQPDWQVWASDISEDALNLAQENATVNQAAVTF--LQSDIFSHISDKYD 178

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     D +   V   +P ++L    DGL+ Y+ +A     +L   G   +E
Sbjct: 179 IIVSNPPYISLRDQDEVEQNVLAHEPHLALFADNDGLAFYQKLALEAEHYLKLTGKIYLE 238

Query: 227 IGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
           IGY Q   V ++FE +     V   +D  G DR+++
Sbjct: 239 IGYKQGEAVSQLFERQFPNKRVRLLQDSFGKDRMVV 274


>gi|148241523|ref|YP_001226680.1| protoporphyrinogen oxidase [Synechococcus sp. RCC307]
 gi|147849833|emb|CAK27327.1| Protoporphyrinogen oxidase [Synechococcus sp. RCC307]
          Length = 294

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 104/208 (50%), Gaps = 13/208 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLAL 115
           WRDF    L +S     PR ETELLV+ A+       E  D   R  DLGTG+G + +AL
Sbjct: 85  WRDF---ELEVSPAVLIPRQETELLVELAMGC----FEASDAPQRWADLGTGSGCLAVAL 137

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVE---GLFDVIVS 170
            +  P   G  VD S +AL +A+ NA   G+  S      +  W+  ++   G  D++VS
Sbjct: 138 ARHWPSSCGWAVDCSREALAVARRNAAALGLLQSAALQWCEGLWWQPLQPLAGQLDLVVS 197

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S +VD L   VRD +PR++LDGG DGL   R I +   + L   G   +E  ++
Sbjct: 198 NPPYIPSAVVDGLEPVVRDHEPRLALDGGSDGLDALRLIIEAAPQMLAPGGWLVLEHHHD 257

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           Q   V  +  +  L      +D  G  R
Sbjct: 258 QAAAVAELLGAAGLQERRQERDLEGQMR 285


>gi|320529372|ref|ZP_08030460.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis
           F0399]
 gi|320138338|gb|EFW30232.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis
           F0399]
          Length = 295

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVC 112
           +LG R+F  +   ++ DT  PRP+TE+LV SA+ F   R     + + I DLGTGTGA+ 
Sbjct: 79  VLGRREFMGLVFRVTRDTLVPRPDTEILVQSAVDFLCARHAAGAEDMCIADLGTGTGAIA 138

Query: 113 LALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           L++L  +         VDIS  A  +A+ NA   G++E+    + D  + + G  +D+I+
Sbjct: 139 LSVLHHADVAELHADAVDISPGAAAVARENAAQLGLAEKCTVHEGDLLAPLAGRSYDMIL 198

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI +  +  L  +VR ++P ++LDGG DGL  YR I       L   G  ++E+G 
Sbjct: 199 SNPPYIPAADIAGLMTDVRTYEPHLALDGGADGLDFYRRIMADAPVMLKAGGAIAIEVGI 258

Query: 230 NQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
            Q  DV  + E   ++      KD  G +RV++
Sbjct: 259 GQAADVAALAEQHPRIVRTELKKDLAGVERVVI 291


>gi|56965631|ref|YP_177365.1| methylase, polypeptide chain release factor [Bacillus clausii
           KSM-K16]
 gi|56911877|dbj|BAD66404.1| methylase [Bacillus clausii KSM-K16]
          Length = 288

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 110/214 (51%), Gaps = 9/214 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +LG+  FY     ++ D   PRPETE LV   L    P  +      ILD+GTG+G
Sbjct: 69  PVQHVLGYEQFYGRTFLVNGDVLIPRPETEELVALVLNKLKPGPQA-----ILDVGTGSG 123

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168
           A+ L L  E P       DIS KAL++A+ NA   G    F   + D  + V G +FDVI
Sbjct: 124 AIALTLKLERPDCHVTATDISEKALDVARENAQRLGADITF--AKGDLLAPVAGAVFDVI 181

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI     D L + VR+F+P ++L    DGL  YR +A+ V   ++   L +VEIG
Sbjct: 182 VSNPPYIPYRDRDSLAVHVREFEPEMALFAEEDGLMFYRRLAEEVPACIHPRSLVAVEIG 241

Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
             Q   V  +F +   F  +N   D  G DR++ 
Sbjct: 242 AGQGEAVQALFAAAFPFADINIVYDINGKDRIVF 275


>gi|325141378|gb|EGC63860.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis 961-5945]
          Length = 245

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 105/195 (53%), Gaps = 12/195 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY  R T++     PRPETE LV++ LA  LP     +  R+ D
Sbjct: 54  RRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 108 LGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +D+IVSNPPYIE+        ++R F+P+I+L    DGLS  RT+A G    L + 
Sbjct: 166 SEGKWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEG 224

Query: 221 GLCSVEIGYNQKVDV 235
           G   +E G++Q   V
Sbjct: 225 GFLLLEHGFDQGAAV 239


>gi|188992911|ref|YP_001904921.1| Protein methyltransferase HemK [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734671|emb|CAP52881.1| Protein methyltransferase HemK [Xanthomonas campestris pv.
           campestris]
          Length = 283

 Score =  113 bits (283), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 11/233 (4%)

Query: 31  DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           +  QRF    A+V R  + E +  + G R F+ + L +S+ T  PR +TE LV+     +
Sbjct: 52  EQAQRF---GALVERRHQGEPVAYLTGSRGFWTLDLAVSTATLIPRADTETLVE----LA 104

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R+++   +R+ DLGTG+GA+ LA+  E P  + +  D S  AL IA+ NA  +G+   
Sbjct: 105 LERLQQTASIRVADLGTGSGAIALAIASERPQAQLIATDASADALAIARHNAHAHGL-HN 163

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            +     W   + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R 
Sbjct: 164 VECRLGHWLQPLAGERFDLIASNPPYIAATDPHLQQGDLR-YEPASALASGSDGLDDIRL 222

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           I      HL   G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 223 IVADAPAHLLPGGWLLLEHGWDQGEAVAALLTARGFAAVATHQDLEQRDRVTL 275


>gi|29655247|ref|NP_820939.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii RSA 493]
 gi|161830961|ref|YP_001596009.1| protein methyltransferase HemK [Coxiella burnetii RSA 331]
 gi|29542519|gb|AAO91453.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii RSA 493]
 gi|161762828|gb|ABX78470.1| protein methyltransferase HemK [Coxiella burnetii RSA 331]
          Length = 277

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L+  Q+  L+  + R LK E I  ILG ++F+++ L ++ D   PRPETE+LV+  
Sbjct: 45  PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP+ EK   +RI DLGTG+GAV LA+  E P +     D S  AL+IA+ NA  + 
Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  +    +W  ++    +  IV NPPYI         L+    +PR +L  G DGLS
Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + I      +L   G   +E GY+Q   ++ + ++     +   +D  G  R+++  R
Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276


>gi|251782312|ref|YP_002996614.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242390941|dbj|BAH81400.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 279

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/220 (35%), Positives = 116/220 (52%), Gaps = 16/220 (7%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLG 105
           +H S   + G   F +++L++      PRPETE LVD  LA      E  D  + +LD+G
Sbjct: 64  QHLSPQYLTGRAYFRDLQLSVDQRVLIPRPETEELVDLILA------ENPDTPLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ ++L KE P ++    DIS   L +A+ NA    +   F  + SD FS + G F
Sbjct: 118 TGSGAIAISLKKERPAWQLTASDISSDVLSLAQDNASHYQLDITF--IVSDVFSQLSGTF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    DG + YR I +  S +L++ G    
Sbjct: 176 DMIVSNPPYIAYEDKDEVGLNVYQSEPHLALFAAEDGYAIYRRIIEEASNYLSEKGKLYF 235

Query: 226 EIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           EIGY Q    K  V   F  ++   V   +D  G +R+++
Sbjct: 236 EIGYKQGEGIKALVNTHFPQKR---VRVLRDVFGKERMVV 272


>gi|225849652|ref|YP_002729886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Persephonella marina EX-H1]
 gi|225646153|gb|ACO04339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Persephonella marina EX-H1]
          Length = 280

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 126/261 (48%), Gaps = 9/261 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  L   ++I + +  +   +     + I R  + E +  I G + FY +  
Sbjct: 25  DTQILLSYVLKLPRWKLITEREEEIPKEKVMEFFSLIERRAQREPLAYITGEKAFYGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE+LVD  L     RI +   V  L++G G+G + ++LLK        
Sbjct: 85  KIKKGVLIPRPETEILVDEVLK----RIPEDKRVLGLEIGVGSGVISISLLKYRHNLFMY 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
           GVDIS KALE+ + NA  + VS R   L+SD F  V  + FD IVSNPPY+ +   +  G
Sbjct: 141 GVDISEKALELTRENAKIHRVSSRLKLLKSDLFKDVPHIKFDFIVSNPPYVSA--EEYAG 198

Query: 185 L-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L E    +P  +L GG  G+  Y  I      +L + G    EIGY Q   V +I +   
Sbjct: 199 LEEEVKKEPVEALIGGKGGIEFYERIVKEGKIYLKEKGFFGFEIGYTQSDRVKKILQDEG 258

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
            F V  +KD    DRV++  R
Sbjct: 259 -FNVKVYKDLQDYDRVVIGER 278


>gi|297620932|ref|YP_003709069.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Waddlia chondrophila WSU 86-1044]
 gi|297376233|gb|ADI38063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Waddlia chondrophila WSU 86-1044]
          Length = 283

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +++ + +    G+   ++ +  D  L D +      AI R +K E    I G  DF++  
Sbjct: 24  KEAATIIGDALGMKPLELYMQHDRPLTDSELKRCREAIARRVKGEPNQYIRGIVDFFDCV 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFF 122
           LT+      PR ETE+LVD  +      +E  D+    + D+ TG+G + +A+ K+ P  
Sbjct: 84  LTVDKRVLIPRMETEILVDKIVK----ELENEDLKGKTLWDVCTGSGCIGIAIKKKFPEL 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +    D+S  ALE A  NAV NGV  R   ++ D     +G   D IVSNPPYI      
Sbjct: 140 EVALSDLSADALEAASENAVKNGVDVRI--VKGDLLEPFKGERADFIVSNPPYIREEEFS 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L +EV++F+P+++L  G  GL  YR   + +   L   G   +EIG  Q  D+V+IF  
Sbjct: 198 TLAVEVKNFEPKMALVSGETGLEIYRRFNEELPGFLKAGGRIWMEIGMGQGEDIVKIFSG 257

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   +D+   DR     R
Sbjct: 258 ENWENVWFEQDWSQLDRFFYATR 280


>gi|257899726|ref|ZP_05679379.1| modification methylase HemK [Enterococcus faecium Com15]
 gi|293571481|ref|ZP_06682508.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E980]
 gi|257837638|gb|EEV62712.1| modification methylase HemK [Enterococcus faecium Com15]
 gi|291608486|gb|EFF37781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E980]
          Length = 279

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 21/215 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVC 112
           +LG+ DFY+ RL ++  T  PRPETE LV+  L       E  DV + ++D+GTGTGA+ 
Sbjct: 74  LLGYADFYDHRLKVTEATLIPRPETEELVEWCLD------ETPDVPLEVIDIGTGTGAIA 127

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIV 169
           ++L      +    VD+S +ALE+AK NA   G    F   +TL+       +  FDVI+
Sbjct: 128 ISLKAARKNWHVSAVDLSEEALEVAKENAQHEGTKISFYHGNTLEP----VQDRRFDVII 183

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI     + +   VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+
Sbjct: 184 SNPPYISRNEWELMDESVRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGTIFLEIGF 243

Query: 230 NQKVDVVRIFES----RKLFLVNAFKDYGGNDRVL 260
            Q   V +IF+     +K+ +    KD  GN+R++
Sbjct: 244 RQGEAVKKIFQQAFPDKKVAIK---KDLFGNERMI 275


>gi|159028708|emb|CAO88180.1| hemK [Microcystis aeruginosa PCC 7806]
          Length = 294

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 17/215 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR+F    L +S D   PRPETELL+D         +   D    +DLGTG+GA+ + L 
Sbjct: 89  WRNF---TLKVSPDVLIPRPETELLID----IVGETVRGDDGGIWVDLGTGSGAIAIGLA 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
                 +   +D S  AL IAK N +  G ++R    Q  W++ +E   G    +VSNPP
Sbjct: 142 SILTKAEIYAIDYSPTALAIAKENIIKTGFADRIILKQGSWWTPLEKWKGQISGMVSNPP 201

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S  +  L +EVR+ +PR++LDGG DGL+  R +      +L   GL  VE+   Q  
Sbjct: 202 YIPSAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGE 261

Query: 234 DVVRIFES----RKLFLVNAFKDYGGNDRVLLFCR 264
            V ++ E+    R++ ++N   D  G DR +L  R
Sbjct: 262 KVAQMLENQGNYRQIQIIN---DLAGFDRFVLAER 293


>gi|28198634|ref|NP_778948.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1]
 gi|182681318|ref|YP_001829478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa M23]
 gi|32129592|sp|Q87DF7|HEMK_XYLFT RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.XfaHemK2P
 gi|28056718|gb|AAO28597.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1]
 gi|182631428|gb|ACB92204.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa M23]
 gi|307579768|gb|ADN63737.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 275

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R F+ + + +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ L
Sbjct: 67  LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
           A+  E P  + +  D S  AL+IA  NA  +G++      + +W+ ++ G  FD+IVSNP
Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGNWYEALLGERFDLIVSNP 181

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI          ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q 
Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG 240

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             V  +  +  L  V   +D    DRV
Sbjct: 241 AAVRTLLHTAGLVAVATMQDLEARDRV 267


>gi|292490386|ref|YP_003525825.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
 gi|291578981|gb|ADE13438.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
          Length = 283

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 122/239 (51%), Gaps = 11/239 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + R  K E +  I G ++F+++ L ++  T  PRPETE LV+  
Sbjct: 47  PEQELTSVQWSCFEQLLQRRAKGEPLAYIRGRQEFWSLDLRVTEATLIPRPETEQLVEE- 105

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
              ++ R+     ++I DLGTG+GA+ LA+  E P  + +G DIS  AL +A+ N    G
Sbjct: 106 ---TIKRMALEQSLKIADLGTGSGAIALAIGSERPQAQVIGADISAVALAVARENGSRLG 162

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGGIDG 202
           + E     + DWF+ + G  FD++VSNPPYI      +   GLE   F+P  +L  G  G
Sbjct: 163 L-ENVTFRRGDWFAPLRGERFDLLVSNPPYIAEGDPHLTQGGLE---FEPDTALIAGDRG 218

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L   R IA G   HL + G   +E GY+Q   ++ +  +     V  F D  G  RV++
Sbjct: 219 LEAIRHIATGAREHLVEGGWLLLEHGYDQGPLLLELLTTLGYRQVVDFCDLAGVPRVVV 277


>gi|332296061|ref|YP_004437984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermodesulfobium narugense DSM 14796]
 gi|332179164|gb|AEE14853.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermodesulfobium narugense DSM 14796]
          Length = 290

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 121/226 (53%), Gaps = 11/226 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI   LK++ +  I+G++ F  ++L ++ D   PR ETE ++D    F  PR +      
Sbjct: 69  AIELRLKNKPLEYIIGYKPFRLLKLKVNEDVLIPRNETEEIIDIIKKF-FPRAK-----T 122

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            LD+GTG+GA+ L+L++E      V  DIS +AL +AK NA  N +  +     +D F  
Sbjct: 123 FLDIGTGSGAIALSLVREIENSFCVATDISERALMVAKENAKENNLENKVSFELADLFPL 182

Query: 161 VEGLFDVIVSNPPYIE--SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +FDVIVSNPPYI+  +  +  +  E+  F+P+I+L     GL  Y  I       L 
Sbjct: 183 EKKMFDVIVSNPPYIDISNTKLSLISKEIY-FEPKIALFAENKGLYFYEKILSKAKDFLL 241

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            DG    E+G+NQ  +VV I E+   F   + KD  G +R ++ CR
Sbjct: 242 FDGGLVFEVGFNQAKEVVEIGEANN-FSCFSLKDLYGVERFVV-CR 285


>gi|196229475|ref|ZP_03128340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chthoniobacter flavus Ellin428]
 gi|196226707|gb|EDY21212.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chthoniobacter flavus Ellin428]
          Length = 275

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 10/251 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G    ++ ++ D  L + +   L   + R    E +  +LG  +F+        
Sbjct: 30  LLAHVLGKKRMELYLEFDRPLSEPELEPLRALVKRRAAGEPLQHLLGTAEFHGRSFLCDK 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE L +  LA    +       R+LD+GTG+G + L L    P  +   VD+
Sbjct: 90  RGLVPRPETEQLCELVLAGGAAK-------RVLDIGTGSGVIALTLATAWPEAQVEAVDL 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S  AL +A+ NA    ++ R   L SD  +SV G +D+IV+N PYI    +  L  EVR 
Sbjct: 143 SPDALALARENAARLELAGRVQFLASDLLASVTGEYDLIVANLPYIARDEIATLTREVR- 201

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            DP  +LDGG DGL  +R      ++HL   G  ++EIG++Q   +  +  +     +  
Sbjct: 202 HDPLSALDGGPDGLEVFRRFIPQAAQHLR--GRLALEIGHDQADPLTELLAAHNFQDIRP 259

Query: 250 FKDYGGNDRVL 260
             DY G DR +
Sbjct: 260 QTDYQGKDRFI 270


>gi|91070123|gb|ABE11047.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone ASNC729]
          Length = 289

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 110/220 (50%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ++RS   + +  I  WRD   ++L +++    PRPETEL+VD  L     + EK   +  
Sbjct: 69  LLRSCPIQYLCGISFWRD---LKLKVTNKVLIPRPETELIVDIVLNIFRRKSEK---LFF 122

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            +LGTG+GA+ +AL    P   GV  DI   ALEIA  N + +           +W+S +
Sbjct: 123 AELGTGSGAISIALALAYPSSNGVATDIDQDALEIATKNFINSSKQSNLKFYCGNWWSPL 182

Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           E   G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL H R I       L 
Sbjct: 183 ENFKGKIDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGDDGLEHIREIIQKAPLFLK 242

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + G   +E  ++Q   V +I    K   +   KD  G  R
Sbjct: 243 EKGWLILENHFDQGEKVKKILIKNKFTSIEIVKDLTGIGR 282


>gi|149185459|ref|ZP_01863775.1| protein chain release factor methylase subunit [Erythrobacter sp.
           SD-21]
 gi|148830679|gb|EDL49114.1| protein chain release factor methylase subunit [Erythrobacter sp.
           SD-21]
          Length = 276

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 16/227 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R   HE +  ILG ++F+     ++ DT  PR ++E+LV++AL        +RD  R+
Sbjct: 61  VQRRAAHEPVAHILGHQEFFGRSFKVTPDTLIPRGDSEVLVEAALEL------QRDAARV 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSD 156
           LDLGTGTGA+ L++L E+   +GVG D S  AL +A  NA   GV  R      D  +  
Sbjct: 115 LDLGTGTGALLLSVLAETQ-AQGVGTDRSPAALAVAHDNADLLGVEHRVRFHLLDWTEDG 173

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           W + + G FD+IV NPPY+E      L  +V   +P  +L  G +GL  YR I   +   
Sbjct: 174 WAADL-GQFDLIVCNPPYVEDEA--DLDPDVCGHEPHGALFAGPEGLDDYRIILPQLRSL 230

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++      +EIG+ Q   V  I  +   F V   +D  G  R L+  
Sbjct: 231 MSVSAAAILEIGHEQSPAVSEIARAVG-FAVELRRDLAGRPRALILT 276


>gi|160876840|ref|YP_001556156.1| HemK family modification methylase [Shewanella baltica OS195]
 gi|217974699|ref|YP_002359450.1| HemK family modification methylase [Shewanella baltica OS223]
 gi|304410656|ref|ZP_07392274.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS183]
 gi|307304753|ref|ZP_07584503.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica BA175]
 gi|160862362|gb|ABX50896.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS195]
 gi|217499834|gb|ACK48027.1| modification methylase, HemK family [Shewanella baltica OS223]
 gi|304351140|gb|EFM15540.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS183]
 gi|306912155|gb|EFN42579.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica BA175]
 gi|315269043|gb|ADT95896.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS678]
          Length = 282

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + +  K   +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 48  PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L    K     +LDLGTGTGA+ LAL  E   ++   VD    A+ +A +N   N 
Sbjct: 108 LNMPLSTYAK-----VLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              + D LQSDWFS+V+   FD+IVSNPPYI+         +VR F+P+ +L    +G +
Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA+    +L  +G   +E G+ Q V +           V   +D+G NDR  +
Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277


>gi|153002120|ref|YP_001367801.1| HemK family modification methylase [Shewanella baltica OS185]
 gi|151366738|gb|ABS09738.1| modification methylase, HemK family [Shewanella baltica OS185]
          Length = 282

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 120/237 (50%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + +  K   +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 48  PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L    K     +LDLGTGTGA+ LAL  E   ++   VD    A+ +A +N   N 
Sbjct: 108 LNLPLSTYAK-----VLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              + D LQSDWFS+V+   FD+IVSNPPYI+         +VR F+P+ +L    +G +
Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA+    +L  +G   +E G+ Q V +           V   +D+G NDR  +
Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277


>gi|227552472|ref|ZP_03982521.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecium TX1330]
 gi|257888290|ref|ZP_05667943.1| modification methylase HemK [Enterococcus faecium 1,141,733]
 gi|257896820|ref|ZP_05676473.1| modification methylase HemK [Enterococcus faecium Com12]
 gi|293378551|ref|ZP_06624714.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium PC4.1]
 gi|227178384|gb|EEI59356.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecium TX1330]
 gi|257824344|gb|EEV51276.1| modification methylase HemK [Enterococcus faecium 1,141,733]
 gi|257833385|gb|EEV59806.1| modification methylase HemK [Enterococcus faecium Com12]
 gi|292642880|gb|EFF61027.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium PC4.1]
          Length = 279

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 117/215 (54%), Gaps = 21/215 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVC 112
           +LG+ DFY+ RL ++  T  PRPETE LV+  L       E  DV + ++D+GTGTGA+ 
Sbjct: 74  LLGYADFYDHRLKVTEATLIPRPETEELVEWCLD------ETPDVPLEVIDIGTGTGAIA 127

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIV 169
           ++L      +    VD+S +ALE+AK NA   G    F   +TL+       +  FDVI+
Sbjct: 128 ISLKAARKNWHVSAVDLSEEALEVAKENAQHEGTKISFYHGNTLEP----VQDRRFDVII 183

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI     + +   VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+
Sbjct: 184 SNPPYISRNEWELMDESVRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGKIFLEIGF 243

Query: 230 NQKVDVVRIFES----RKLFLVNAFKDYGGNDRVL 260
            Q   V +IF+     +K+ +    KD  GN+R++
Sbjct: 244 RQGEAVKKIFQQAFPDKKVAIK---KDLFGNERMI 275


>gi|167740376|ref|ZP_02413150.1| protein methyltransferase HemK [Burkholderia pseudomallei 14]
          Length = 284

 Score =  113 bits (282), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 131/263 (49%), Gaps = 18/263 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L    G S  Q+I   D  LD  R R+    A  R    E I ++ G R+F+ + 
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAARARYLALQA--RRAAGEPIAQLTGAREFFGLE 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  + 
Sbjct: 82  FDITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARV 137

Query: 125 VGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIE 176
             ++ S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI 
Sbjct: 138 WALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIA 195

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V 
Sbjct: 196 RHDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVR 254

Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259
            + ++     V +  D    +R 
Sbjct: 255 ALLDAAGFADVESRADLASIERA 277


>gi|325981710|ref|YP_004294112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosomonas sp. AL212]
 gi|325531229|gb|ADZ25950.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosomonas sp. AL212]
          Length = 278

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 11/241 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++  PD  L  +Q    ++ + + ++   +  ++G R F+++   ++     PRPETELL
Sbjct: 37  LLTHPDQALPGQQFEKFSSLVQQRIEGLPVAYLIGKRAFFDLTFKVTEAVLIPRPETELL 96

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL      I  +   ++LDLGTG+GA+ +++ K  P  + + VD+S  A+++ +SN 
Sbjct: 97  VEWALEL----IPSQKFCKVLDLGTGSGAIGISIAKHRPQSQVIAVDLSPAAIDVCQSNV 152

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDG 198
               V+   + ++ +WF  + G  FD+IVSNPPY+     D   L+  D  F+P ++L  
Sbjct: 153 EILEVA-NLNVIRGNWFDELSGEKFDLIVSNPPYVAE---DDPHLQQGDLRFEPEMALSA 208

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G  G++    I +    +L K+G   +E GYNQ     ++  ++    + ++ D  G  R
Sbjct: 209 GEHGMACITHIINAAPGYLGKEGWLLLEHGYNQAEACRQLLRNKDFSNICSYPDLAGIMR 268

Query: 259 V 259
           V
Sbjct: 269 V 269


>gi|110597726|ref|ZP_01386010.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM
           13031]
 gi|110340633|gb|EAT59113.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM
           13031]
          Length = 297

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 117/238 (49%), Gaps = 12/238 (5%)

Query: 31  DDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AF 88
           D+  RF    A+ R  L+   +  ILG + FY +  ++      PRPETELLV+ AL + 
Sbjct: 58  DELDRF---RALCRQRLEGRPVQYILGEQCFYGLEYSVDERVLIPRPETELLVEQALESL 114

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                       ILD+GTG+G + + + K  P      VD S  AL +A+ NA  +GV  
Sbjct: 115 GYSSRGGPGEANILDIGTGSGCIAVTMAKLCPALTATAVDCSLDALAVARRNAGRHGVES 174

Query: 149 RFDTLQSDW----FSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           R   + +D     FS     G F +I+SNPPYI     D L  EVRD++P+++L    +G
Sbjct: 175 RISFVTADMLDDHFSEKISTGPFTLILSNPPYIPEGEWDSLQKEVRDYEPKLALTTP-NG 233

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              YR++A   ++ L   G    E+  +  V V  I +S     +   KDY G DRV+
Sbjct: 234 FECYRSVAGQAAKLLTAGGKLFFELHADGAVLVSEIMKSHGFSALTVTKDYSGLDRVI 291


>gi|326803666|ref|YP_004321484.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650377|gb|AEA00560.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 239

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 7/210 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVC 112
           +LG   FY  R  +++ T  PR +TE L+D         ++EK+    +LDLGTG+GA+ 
Sbjct: 26  LLGEAWFYGYRFRVNAATLIPRFDTERLIDCVHTLRKSGQLEKQ--ADVLDLGTGSGAIA 83

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171
           + L KE P  K   VDIS  AL +AK NA  + V+   + ++ D   +V +  FD+I+SN
Sbjct: 84  VTLAKELPDLKLTAVDISSDALAVAKENAYFHQVT--IEWIKGDMLDAVAQRKFDLIISN 141

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI    +  +G +V  ++P+++L    DG  +Y+  A  +   +  DG   +E G +Q
Sbjct: 142 PPYISENEIGEMGEDVLMYEPKLALFAKDDGYYYYKQFARRIQSFMKADGTLLMECGSHQ 201

Query: 232 KVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
              ++ +F +S     V + KDY G DR++
Sbjct: 202 AAKIISLFKKSNPKAEVKSIKDYNGIDRII 231


>gi|116749149|ref|YP_845836.1| HemK family modification methylase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698213|gb|ABK17401.1| modification methylase, HemK family [Syntrophobacter fumaroxidans
           MPOB]
          Length = 288

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 125/266 (46%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   ++   L  V      Q+ +  D  L   +      AI R    E    I G ++F+
Sbjct: 26  QPRANAEVLLAHVLDTERIQLYLRYDQPLGSAELARYREAIRRRASCEPTQYITGRQEFW 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +      PRPETE+LV+ AL   LP        R+LD+GTG+GA+ ++L  E   
Sbjct: 86  SLELEVGPAVLIPRPETEVLVEKALEL-LPGTR----ARVLDIGTGSGAIAVSLATERKD 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESV 178
              V  D S  ALEIA+ NAV + V +R      D FS+      +FD+IV+NPPYI   
Sbjct: 141 LTVVATDRSPGALEIARRNAVRHKVEDRVWLAAMDLFSAFLPAVPVFDLIVANPPYIGDF 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  E+ + +P  +L GG+DGL   R I       L   G   +EIG  Q   +  +
Sbjct: 201 EFAALPREIAEHEPVEALRGGVDGLDVIRKILAEAPFFLKPGGSLLIEIGKGQDEMLPLV 260

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++ ++      +DY G  RV + CR
Sbjct: 261 PDNSRIDTCGFIRDYSGVLRV-MHCR 285


>gi|172038587|ref|YP_001805088.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142]
 gi|171700041|gb|ACB53022.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142]
          Length = 303

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 8/213 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           WR F    L +S D   PRPETEL++D AL A    R         +DLGTG+GA+ L L
Sbjct: 93  WRRF---SLKVSPDVLIPRPETELIIDFALKAVQHSRNPYLSSGHWVDLGTGSGAIALGL 149

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172
               P      VD S +AL IA+ NA+  G S +    Q  W++ +E   G    +VSNP
Sbjct: 150 ADSFPQATIHAVDTSIQALTIAQENAIKEGFSSQIHFYQGSWWTPLEHLQGQVSAMVSNP 209

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI + ++  L  EV+  +P ++LDGG DGL     + D    +L   G+  VE+   Q 
Sbjct: 210 PYIPTSLLSQLEPEVKKHEPILALDGGNDGLEAINYLIDTAPNYLISGGIFLVEMMAGQG 269

Query: 233 VDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
             V ++ E+   +  +    D  G  R  L  R
Sbjct: 270 EKVKQLLEASYHYQAIEILPDLAGVGRFALAYR 302


>gi|254523856|ref|ZP_05135911.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas sp. SKA14]
 gi|219721447|gb|EED39972.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas sp. SKA14]
          Length = 285

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  + G R F+ + L +   T  PRPETELLV+     +L R+     +++
Sbjct: 64  LARRVAGEPVAYLTGRRGFWTLDLEVDPATLIPRPETELLVE----LALDRLPLDRALQL 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
            DLGTG+GA+ LAL  E P  + +  D S  AL +A  NA  + +   RF     DW++ 
Sbjct: 120 ADLGTGSGAIALALASERPQAQVLATDASPGALAVAARNAARHELHNVRFAEGGHDWYAP 179

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHL 217
           ++G  FD+I SNPPYI S   D   L+  D  F+P  +L  G+DGL   R I DG   HL
Sbjct: 180 LQGARFDLIASNPPYIAS---DDPHLQQGDLRFEPATALASGVDGLDDIRRIVDGGQAHL 236

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              G   +E G+ Q   +  +FE+ +   V   +D    DR+ L  R
Sbjct: 237 LPGGWLLIEHGWGQGEAIRALFEAARFADVQTVQDLEQRDRITLGRR 283


>gi|325267515|ref|ZP_08134168.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394]
 gi|324981040|gb|EGC16699.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394]
          Length = 311

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 12/255 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  +TGLS  Q+I     +L   Q         R  + E +  +LG R+FY     ++ 
Sbjct: 63  LLQHITGLSHSQLITRDGDLLPPEQEAQWRQLCRRREQGEPVAYLLGSREFYGRTFAVNR 122

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE L+++AL     R+       + D+GTG+G + ++   E P       DI
Sbjct: 123 HVLIPRPETEHLLEAALC----RLPAGGA--LWDMGTGSGIIAVSAKLERPDADVFASDI 176

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLE 186
           S  AL +A+ NA T   +  F   Q  WF + +     +DVIVSNPPYI +        +
Sbjct: 177 SADALAVAQYNAQTLKAACTF--AQGSWFEAQKQPARQWDVIVSNPPYIRADDPHLAQGD 234

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +R F+P  +L    DGL H R I     +HL   G   +E GY+Q  D+ R+F       
Sbjct: 235 LR-FEPEGALTDFADGLQHIRHIVAQAPQHLKTGGYLLLEHGYDQAADIRRLFAQHGYRH 293

Query: 247 VNAFKDYGGNDRVLL 261
                D  G DRV L
Sbjct: 294 CETLLDLAGLDRVTL 308


>gi|301629495|ref|XP_002943875.1| PREDICTED: protein methyltransferase hemK homolog [Xenopus
           (Silurana) tropicalis]
          Length = 269

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 9/215 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  + G + FY + L + +   +PRP+TE LVD AL    P +      RI D
Sbjct: 39  RRAAGEPVAYLTGRKAFYGLPLAVDARVLDPRPDTETLVDWALELLAPHVAP----RIAD 94

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LAL  +    + + VD S  AL +A++NA+  G+  RF  ++  W   V G
Sbjct: 95  LGTGSGAIALALQSQRADAQVLAVDASAGALAVARANAMRLGLPVRF--VRCHWLDGVAG 152

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD IV+NPPYI +   D   L     +P  +L  G DGL   RTI+      L   G  
Sbjct: 153 PFDAIVANPPYIRA---DDPHLAALRHEPLSALVSGADGLDDIRTISAQAPMRLAPGGWL 209

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            +E G++Q   V  +  +     V +  D  G  R
Sbjct: 210 LLEHGWDQADAVQALLRAAGFAAVASRHDLAGIAR 244


>gi|75907706|ref|YP_322002.1| modification methylase HemK [Anabaena variabilis ATCC 29413]
 gi|75701431|gb|ABA21107.1| Modification methylase HemK [Anabaena variabilis ATCC 29413]
          Length = 308

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 104/194 (53%), Gaps = 14/194 (7%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVR 100
           L  + I  +  WR+F   RLT+SS    PRPETE L+D A+A      S  ++++   V 
Sbjct: 82  LPVQYIAGVTPWRNF---RLTVSSAVLIPRPETECLIDLAVAAVANSESALQLQQGHWV- 137

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             DLGTG+GA+ L L    P      VD S +AL IA+ NA   G+ +R    Q  W+  
Sbjct: 138 --DLGTGSGAIALGLADAFPEATIHAVDCSLEALAIAQQNAQNTGLVDRMRFYQGRWWEP 195

Query: 161 ---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              ++G F  +VSNPPYI S IV  L  EV + +P ++LDGG DGL   R + +    +L
Sbjct: 196 LTLLKGQFSGMVSNPPYIPSDIVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYL 255

Query: 218 NKDGLCSVEIGYNQ 231
             +G+  +E+   Q
Sbjct: 256 RPEGIWLIEMMAGQ 269


>gi|303232598|ref|ZP_07319284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae PB189-T1-4]
 gi|302481385|gb|EFL44459.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae PB189-T1-4]
          Length = 546

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 7/261 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S   +C  T L+  ++ ++ D VL + +   +   +    + + +  I G   F ++ L 
Sbjct: 51  SQWLICAATKLTRVELFLNFDRVLTNDELACMHKLVAARAEGKPLQYITGEMAFRHIVLR 110

Query: 67  LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                  PRPETE+LV+ AL   ++        V IL++GTG+G + L++  E       
Sbjct: 111 CEEQVLIPRPETEMLVEYALNKLTILHTAPHTPV-ILEIGTGSGCIALSIASELEHSHVT 169

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVD 181
             D S  A  +A+ NA   G+    D +++ +   V    +G  D ++SNPPYI S IVD
Sbjct: 170 ATDSSPFACSLAQRNAHALGLDSAVDIIETSYADGVSPQLKGNVDALISNPPYIPSAIVD 229

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRDF+P  +LDGG DGL  +R + + V  ++   G   VE+  +      ++   
Sbjct: 230 TLTSEVRDFEPHAALDGGTDGLRVFRGLLELVPTYVRPGGFFCVELFEDNVQTAAQLCRQ 289

Query: 242 RKLF-LVNAFKDYGGNDRVLL 261
             LF  V   KD  G  R ++
Sbjct: 290 SNLFSTVEVTKDLAGRSRFII 310


>gi|134301000|ref|YP_001114496.1| HemK family modification methylase [Desulfotomaculum reducens MI-1]
 gi|134053700|gb|ABO51671.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfotomaculum reducens MI-1]
          Length = 289

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 17/265 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +VTG+    + +  +  L  +Q+      + R  + E +  ++G ++F     
Sbjct: 25  DAQVLLSQVTGIDRTGLFMRQEQPLTPQQQEKYQILLERRAQGEPVAYLIGRKEFMGRDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ D   PRP+TEL+V++A+ F     S P +        +D+GTG+GA+ ++L     
Sbjct: 85  VVTPDVLIPRPDTELMVETAVKFFHKNSSCPPV-------AVDVGTGSGAIAVSLASLVQ 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIE 176
             +   +D+S  AL++A+ NA   G+ ER    Q +    +         +I +N PY+ 
Sbjct: 138 ELQVYAIDLSEAALKVARQNAERLGMKERVHFQQGNLLEPLLKTMGEEVSIITANLPYVP 197

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +  L  +V++F+P ++LDGG DGL  YR +     R L   GL  +EIG  Q     
Sbjct: 198 SGDIPTLMRDVKEFEPHLALDGGPDGLDLYRLLIPQAYRLLQPGGLLLMEIGPGQGTGAK 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
           +I  + + +     KD  G +R++L
Sbjct: 258 KILPAGQ-WQGTVLKDLAGRERLVL 281


>gi|53717071|ref|YP_105274.1| hemK protein [Burkholderia mallei ATCC 23344]
 gi|67639916|ref|ZP_00438744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei GB8 horse 4]
 gi|121597316|ref|YP_990283.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1]
 gi|124381896|ref|YP_001024782.1| methyltransferase, HemK family protein [Burkholderia mallei NCTC
           10229]
 gi|126446694|ref|YP_001079121.1| protein hemK [Burkholderia mallei NCTC 10247]
 gi|167003350|ref|ZP_02269136.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei PRL-20]
 gi|254175844|ref|ZP_04882503.1| protein hemK [Burkholderia mallei ATCC 10399]
 gi|254203238|ref|ZP_04909600.1| hemK protein [Burkholderia mallei FMH]
 gi|254208573|ref|ZP_04914922.1| putative protein HemK [Burkholderia mallei JHU]
 gi|254355791|ref|ZP_04972070.1| protein hemK [Burkholderia mallei 2002721280]
 gi|52423041|gb|AAU46611.1| hemK protein [Burkholderia mallei ATCC 23344]
 gi|121225114|gb|ABM48645.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1]
 gi|124289916|gb|ABM99185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei NCTC 10229]
 gi|126239548|gb|ABO02660.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei NCTC 10247]
 gi|147746283|gb|EDK53361.1| hemK protein [Burkholderia mallei FMH]
 gi|147751260|gb|EDK58328.1| putative protein HemK [Burkholderia mallei JHU]
 gi|148024762|gb|EDK82945.1| protein hemK [Burkholderia mallei 2002721280]
 gi|160696887|gb|EDP86857.1| protein hemK [Burkholderia mallei ATCC 10399]
 gi|238520528|gb|EEP83987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei GB8 horse 4]
 gi|243061103|gb|EES43289.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei PRL-20]
          Length = 285

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ ++ 
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLKF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 84  DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139

Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177
            ++ S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI  
Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           + ++     V +  D    +R 
Sbjct: 257 LLDAAGFADVESRADLASIERA 278


>gi|81300672|ref|YP_400880.1| HemK family modification methylase [Synechococcus elongatus PCC
           7942]
 gi|81169553|gb|ABB57893.1| modification methylase, HemK family [Synechococcus elongatus PCC
           7942]
          Length = 293

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 8/206 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +S     PRPETEL++D A+A+S      R      DLGTG+GA+ +AL 
Sbjct: 84  WRDL---ELQVSPAVLIPRPETELIIDLAIAWSQAE-PARQTGFWADLGTGSGAIAIALA 139

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPP 173
           +  P    + VD+S +AL IA++NA   G+S+R    Q  W    +   G    I+SNPP
Sbjct: 140 RALPQITVLAVDVSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPP 199

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI +     L  EVRD +PR +L+ G DGL   R +A     +L   GL   E    Q  
Sbjct: 200 YIPTQEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQST 259

Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDR 258
            V  +  +   +  + + +D  G DR
Sbjct: 260 AVTALLAAIPGYSEIQSHRDLAGRDR 285


>gi|146328946|ref|YP_001209003.1| HemK family modification methylase [Dichelobacter nodosus VCS1703A]
 gi|146232416|gb|ABQ13394.1| modification methylase, HemK family [Dichelobacter nodosus
           VCS1703A]
          Length = 276

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 120/225 (53%), Gaps = 12/225 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   ++R  + E    ILG + FY++ L +S     PRPETE LVD+ALA    +I  +D
Sbjct: 54  LNALLLRRARGEPFAYILGNQPFYHLDLKVSPAVLIPRPETEQLVDAALA----KIPPQD 109

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R++DLGTG+GA+ LA+  E P  + + VD S  AL +A+ NA    ++     L SDW
Sbjct: 110 CYRVIDLGTGSGAIALAIAAERPHCRVLAVDKSWDALRVAQENARHLQLANVHFVL-SDW 168

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +++ +   D+IVSNPPYI++       L    ++P+++L     G +    +     R 
Sbjct: 169 LTAIADARADMIVSNPPYIDAHDEHLAALA---YEPQMALVSPEHGYADLLHLIAHAGRC 225

Query: 217 LNKDGLCSVEIGYNQKVDVVRIF--ESRKLFLVNAFKDYGGNDRV 259
           L  +G   +E G NQ+   +R F  E      +++ +DY G +R+
Sbjct: 226 LRPNGWLLLEHG-NQQAQKLRAFAAEQSGWQHIHSLRDYAGWERI 269


>gi|304415272|ref|ZP_07395968.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
 gi|304282878|gb|EFL91345.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
          Length = 273

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 128/245 (52%), Gaps = 28/245 (11%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG +   ++   ++ L   Q F L   + R  + E I  ++G R+F+++ 
Sbjct: 23  RDAEILLSFVTGRARTFLLAFSETELTGEQLFKLAPLVERRQQGEPIAYLVGEREFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           LT+SS +  PRP+TE LV+ AL   LP     D  RILDLG+G+GA+ LAL  E P    
Sbjct: 83  LTVSSASLIPRPDTESLVEQALV-CLP----ADACRILDLGSGSGAIALALASERPDCLV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW---------------FSSVEGLFDVI 168
           +G+DI+  A+ +A+ NA+   ++  RF  +Q +W               FSS+   F +I
Sbjct: 138 IGIDINADAVTLARHNALKLAINNLRF--VQGNWFNINAFTKQGVERDHFSSLMAGFRLI 195

Query: 169 VSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           VSNPPYI S   D   L++ D  ++P  +L  G DG+     I      +L  +G   VE
Sbjct: 196 VSNPPYIAS---DDPHLKMGDVRYEPVEALVAGDDGMDDLVIIVRQAPAYLLSEGWLLVE 252

Query: 227 IGYNQ 231
            G+ Q
Sbjct: 253 HGWQQ 257


>gi|300702901|ref|YP_003744502.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Ralstonia solanacearum CFBP2957]
 gi|299070563|emb|CBJ41858.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum CFBP2957]
          Length = 281

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+    
Sbjct: 17  EARMLVSHVTGLSRVQLITQDTYAIDNGVRTRLAELATRRLAGEPMAYLLGEREFFGRLF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ A    L RIE RD   +LDLGTG+G  AV +AL +     +
Sbjct: 77  QVTPAVLIPRPDTELLVEQA----LDRIEDRDAPDVLDLGTGSGIIAVTIALARRD--AR 130

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178
               D S  AL +A  NA   G +        DW+     S     FD+IVSNPPYI S 
Sbjct: 131 VWATDASADALAVAAGNAQALGAAN-VHVAHGDWYGALPESDAPPAFDLIVSNPPYIASA 189

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +
Sbjct: 190 DAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 248

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                   V   +D  G+DR
Sbjct: 249 LAEAGFADVFTARDLAGHDR 268


>gi|302380151|ref|ZP_07268623.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311934|gb|EFK93943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna ACS-171-V-Col3]
          Length = 263

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 11/215 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG++ FYN +    S    PR +TE+LVD  +  +      R    IL++G G+G 
Sbjct: 59  IEYILGFKYFYNRKFYTHSSVLIPRFDTEILVDEIIKIN------RKFENILEIGIGSGI 112

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169
           + + L  E    K +GVDI+ KA+E++K NA + N  +  F  + SD + +V   FD+IV
Sbjct: 113 ISITLNLELNS-KVLGVDINKKAIELSKKNAESLNATNVEF--IYSDLYENVNSKFDLIV 169

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI+    + L  ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGY
Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           NQ+  +  I +          KD+ G DRV++  R
Sbjct: 229 NQRESIFEILDENGFENRYCIKDFNGFDRVIIARR 263


>gi|326790731|ref|YP_004308552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium lentocellum DSM 5427]
 gi|326541495|gb|ADZ83354.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium lentocellum DSM 5427]
          Length = 290

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 6/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V   +  Q++++    LD+  +    + I +      + ++ G ++F  +  
Sbjct: 31  DAKLLMKYVLAFNETQLLLERQKRLDEGMQQIYKSLIEKRSSGIPLQQLTGTQEFMGLEF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE L++  L  +     KR +    D+GTG+G + + L          
Sbjct: 91  QVNEHVLIPRQDTETLIEELLEQNKNFSFKRGI----DIGTGSGCISITLAYYIKELTMC 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
            +DIS +AL++A+ N   + + +R  TL+SD   +   E   D+IVSNPPYI    V+ L
Sbjct: 147 AIDISEEALKVARHNIQKHDLEKRIYTLKSDVLENYAEEEKVDLIVSNPPYISKEEVETL 206

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            +EV   +PR +L    DGLS Y+ I+     +L K G+ + EIGYNQ   V  I +   
Sbjct: 207 MIEVIGHEPREALTDEGDGLSFYKRISKAAKSYLKKGGVIAYEIGYNQGKAVTTILKEEG 266

Query: 244 LFLVNAFKDYGGNDRVL 260
              V    D  GNDRV+
Sbjct: 267 YSDVKLLPDLSGNDRVI 283


>gi|162447072|ref|YP_001620204.1| HemK family SAM-dependent methyltransferase [Acholeplasma laidlawii
           PG-8A]
 gi|161985179|gb|ABX80828.1| SAM-dependent methyltransferase, HemK family [Acholeplasma
           laidlawii PG-8A]
          Length = 283

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 13/213 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I+G+  FY  +  +S     PR ETE LV+  L       E + V  +LDLGTG+GA
Sbjct: 69  VQHIVGYSYFYGYKFKVSDQVLIPRRETEQLVEETLLIYDTYFEDQKV-DVLDLGTGSGA 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + L  E P  +    DIS  AL +A+ N +   +S + + + SDWFS++   +D+IV+
Sbjct: 128 IAITLSIEEPNMQVEASDISVTALMVARENQLN--LSSKVNFIASDWFSNINKKYDIIVA 185

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI +   D    +V   +P ++L GG+DGL  Y  I      +L +  L + E    
Sbjct: 186 NPPYIPN---DEAVEDVVTKEPSLALYGGVDGLEPYEIILKNAKNYLKEKALIAFEHSMY 242

Query: 231 Q----KVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           Q    K  +++ F+  K   V   KD  G DR+
Sbjct: 243 QSENLKTLILKYFKDAK---VRQLKDLQGKDRM 272


>gi|119505821|ref|ZP_01627887.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080]
 gi|119458319|gb|EAW39428.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080]
          Length = 271

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 129/256 (50%), Gaps = 19/256 (7%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
            +F C  + L +H      + V + R   FL   + R    E +  ILG  +F+++ L +
Sbjct: 24  QTFECDRSWLYAH----GDEPVTESRVAHFL-GLVERRQAGEPLAYILGQWEFWSLPLKV 78

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PR +TELLV  A+A  LP   K+   R LDLGTG+GAV LA+  E P  +   V
Sbjct: 79  TPDVLIPRMDTELLVQWAVAL-LPEQSKQ---RCLDLGTGSGAVALAVKHEFPTSEVTAV 134

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D+S  AL +A++N     +    + L+  WF  V    FD++V+NPPYI     D   L 
Sbjct: 135 DLSQPALNVARTNG--QQLQLEVEWLEGSWFEPVAAREFDLVVANPPYIRE---DDDHLH 189

Query: 187 VRDF--DPRISLDGGIDGLSHYRT-IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             D   +P+++L  GIDGL   R  +ADG S  L   G   +E G++Q  DV  +  +  
Sbjct: 190 QGDLPAEPKMALTSGIDGLHALRQLVADGQSA-LGPGGWMLLEHGWDQGPDVRDLLVTHG 248

Query: 244 LFLVNAFKDYGGNDRV 259
              V   +D  G +RV
Sbjct: 249 WQAVETRRDLAGRERV 264


>gi|15675119|ref|NP_269293.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS]
 gi|71910677|ref|YP_282227.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS5005]
 gi|13622278|gb|AAK34014.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS]
 gi|71853459|gb|AAZ51482.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS5005]
          Length = 279

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE P ++    DIS  AL++AK+NA    +   F  ++SD FS +   FD
Sbjct: 119 GSGAIAISLKKERPNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISETFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|307544473|ref|YP_003896952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
 gi|307216497|emb|CBV41767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
          Length = 282

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 131/261 (50%), Gaps = 16/261 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   LC V G+    +    D ++   D+ RF     I      + +  + G R+F+ +
Sbjct: 25  DAEVLLCHVLGVDRAWLYTWGDREAGGSDQARF--EALIAARAAGQPVAYLTGEREFWGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L     T  PRP+TE LV +AL+    R+  R   R+LDLGTG+GAV LAL  E P + 
Sbjct: 83  SLLTGPSTLIPRPDTETLVAAALS----RMPAR-AGRLLDLGTGSGAVALALASERPDWY 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
            +G+D++  A+ +A+ NA   G++        DWF+++ E  FDVIV+NPPY+     D 
Sbjct: 138 ALGIDLNPGAVALARRNAERLGIAN-VGFRVGDWFAALDESDFDVIVANPPYLAD---DD 193

Query: 183 LGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             LE+ D  F+PR +L  G  GL+    + D     L  DG   +E G  Q   V     
Sbjct: 194 PHLELGDVRFEPRGALVAGDQGLADLHHLVDASRHRLVADGWLLLEHGAEQGAAVREALC 253

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
           ++    V + +D  G++RV L
Sbjct: 254 AKGYQDVASEQDLAGHERVSL 274


>gi|197120069|ref|YP_002140496.1| peptide chain release factor methyltransferase [Geobacter
           bemidjiensis Bem]
 gi|197089429|gb|ACH40700.1| peptide chain release factor methyltransferase [Geobacter
           bemidjiensis Bem]
          Length = 285

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 122/238 (51%), Gaps = 11/238 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC    L    + ++ D  L D +       + R  + E +  ILG ++F  +  
Sbjct: 32  EAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFMGLEF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124
            ++     PR +TE+LV  A       +++ +  R ILD+GTG+G V +A+ K  P  + 
Sbjct: 92  RVTPAVLIPRHDTEVLVTEA-------VKRGEACRSILDIGTGSGCVAVAVAKALPEAEV 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+S  A+E+A+ NA  NGV+ +F   Q   F    G  FD++VSNPPYI S  +  L
Sbjct: 145 FTVDVSADAIEVARGNAERNGVTVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADLATL 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             EVRDF+P  +LDGG DGL  YR I      +LN  G    E+G  Q  +V+ +  S
Sbjct: 203 QQEVRDFEPAGALDGGGDGLDFYRRITADAPAYLNPGGWLLFEVGAGQAGEVLELLNS 260


>gi|312112636|ref|YP_003990952.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y4.1MC1]
 gi|311217737|gb|ADP76341.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y4.1MC1]
          Length = 288

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNV 63
           R +   LC    ++  Q++      +D+  R      I + + +H  +  + G+  FY  
Sbjct: 24  RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHAYEHVPVQHLTGFEQFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETE LV+  L        +   V ++D+GTG+GA+ + L  E+P   
Sbjct: 84  LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +DIS +AL++A+ NA   G    F   D LQ           DV+VSNPPYI    +
Sbjct: 144 VTAIDISAEALQMAEQNAKRLGADVAFICGDLLQP--LIEANRKVDVVVSNPPYIPEDEI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D +P  +L GG DGL  YR++   +   L +  L + E+G  Q   V  +  
Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAML- 260

Query: 241 SRKLF---LVNAFKDYGGNDRVL 260
            RK F    V    D  G DR++
Sbjct: 261 -RKTFPHAKVEVVFDINGKDRMV 282


>gi|21230309|ref|NP_636226.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769697|ref|YP_244459.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111859|gb|AAM40150.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575029|gb|AAY50439.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 283

 Score =  112 bits (280), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 11/233 (4%)

Query: 31  DDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           +  QRF    A+V R  + E +  + G R F+ + L +S+ T  PR +TE LV+     +
Sbjct: 52  EQAQRF---GALVERRHQGEPVAYLTGSRGFWTLDLAVSTATLIPRADTETLVE----LA 104

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R+E    VR++DLGTG+GA+ LA+  E P  + +  D S  AL IA+ NA  +G+   
Sbjct: 105 LERLELTAGVRVVDLGTGSGAIALAIASERPQAQLIATDASADALAIARHNAHAHGL-HN 163

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            +     W   + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R 
Sbjct: 164 VECRLGHWLQPLAGERFDLIASNPPYIAAADPHLQQGDLR-YEPASALASGSDGLDDIRL 222

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           I      HL   G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 223 IVADTPAHLLAGGWLLLEHGWDQGEAVAALLIARGFAAVATHQDLEQRDRVTL 275


>gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans BC]
 gi|317116213|gb|ADU98701.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans BC]
          Length = 281

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 107/216 (49%), Gaps = 9/216 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R    E +  + G ++FY + L + +   +PRP+TE+LVD AL    P    R    + 
Sbjct: 63  ARRAAGEPVAYLTGSKEFYGLPLRVDARVLDPRPDTEILVDWALELLAPLPAPR----VA 118

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL    P  + + +D S  AL +A++NA   G+  RF  +Q+DW + + 
Sbjct: 119 DLGTGSGAIALALQHARPDARVLAMDASAGALAVARANAERLGLPVRF--VQADWLAGIA 176

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD IVSNPPYI +       L     +P  +L  G DGL   R IA      L   G 
Sbjct: 177 GPFDAIVSNPPYIPAQDPHLAALA---HEPLSALASGADGLDDIRAIAAQAPALLAPGGW 233

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +E G++Q   V  +  +  L  V +  D  G  R
Sbjct: 234 LLLEHGWDQAGAVQALLRASGLARVQSRDDLAGIAR 269


>gi|332980840|ref|YP_004462281.1| protein-(glutamine-N5) methyltransferase [Mahella australiensis
           50-1 BON]
 gi|332698518|gb|AEE95459.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mahella australiensis 50-1 BON]
          Length = 281

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 14/264 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD    L  +  +    + +D    L   Q+      I +      +  +L    F +
Sbjct: 22  ARRDVEILLQELLDVDRSALYLDRSRALLPEQKIMFEQWIKQRCARMPLQYVLHKAWFMD 81

Query: 63  VRLTLSSDTFEPRPETELLVD----SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + L +      PRPETELLV+     A   S P       +++LD+GTG+GA+ +AL + 
Sbjct: 82  MELYVDERVLIPRPETELLVEVVIKEAKGMSEP-------LQVLDIGTGSGAIAIALARH 134

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
               +   VDIS  AL +A+ N     + +R   L+ + F  V+G+ FD+IVSNPPYI  
Sbjct: 135 MSGCRVWAVDISPDALAVARINVGKYSLQQRVTLLEGNLFEPVKGMAFDIIVSNPPYIVR 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EVR  +P  +L+GG DGL  YR +       L   G  ++EIGY+Q   V  
Sbjct: 195 DDLIELEPEVRS-EPEPALNGGDDGLDFYRKLCHA-GELLKPHGFLALEIGYDQGQAVSD 252

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           I ++     +   KD+   DR++L
Sbjct: 253 ILKACGFKDIQVLKDFANMDRIVL 276


>gi|167582489|ref|ZP_02375363.1| hemK protein [Burkholderia thailandensis TXDOH]
          Length = 285

 Score =  112 bits (280), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 19/264 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G S  Q+I   D  LD    +R+    A  R    E + ++ G R+F+ +
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEA--RRAAGEPVAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++    P  +
Sbjct: 82  EFDVTPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASVRPDAR 137

Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYI 175
              +D S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI
Sbjct: 138 VWALDRSAAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYI 195

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                     ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V
Sbjct: 196 ARHDPHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAV 254

Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259
             + E+     V +  D    +R 
Sbjct: 255 RALLEAAGFADVESLADLASIERA 278


>gi|329897170|ref|ZP_08271910.1| HemK family modification methylase [gamma proteobacterium IMCC3088]
 gi|328921325|gb|EGG28719.1| HemK family modification methylase [gamma proteobacterium IMCC3088]
          Length = 275

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 116/228 (50%), Gaps = 10/228 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++H  L +V+GL    +   P+  L  R        + R      +  +LG R+FY + L
Sbjct: 22  EAHLLLEQVSGLERTTLFAWPERELAPRVVQQYRALVDRRASGVPVAYLLGRREFYGLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124
            +      PRPETELLVD AL  +L      DV   +LDLGTG+GA+ LAL  + P +  
Sbjct: 82  HVDQRVLIPRPETELLVDVALGLAL------DVKAEVLDLGTGSGAIALALASQRPQWSI 135

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             VD S  AL++A +N    G+ +  D   SDWF+S+ +  FD+IVSNPPY+E       
Sbjct: 136 CAVDRSEDALDVATANQENLGI-KNIDFYCSDWFASLPQYQFDLIVSNPPYVEPDSAYLQ 194

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             +VR F+P  +L     GL+    I D   ++L   G   +E GY Q
Sbjct: 195 QGDVR-FEPIKALVAPNAGLADLFAIIDQAPKYLKSGGTLWLEHGYQQ 241


>gi|260655566|ref|ZP_05861054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Jonquetella anthropi E3_33 E1]
 gi|260630014|gb|EEX48208.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Jonquetella anthropi E3_33 E1]
          Length = 285

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/244 (31%), Positives = 115/244 (47%), Gaps = 12/244 (4%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           H  + DP    + R    +++A+ R L  E +  I G   F+   L +      PRPETE
Sbjct: 48  HARLQDPVGAEEAR---VISSALCRRLNREPVQYITGRCQFWGRNLKVLPGCLVPRPETE 104

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            LV + L+       +      LD GTGTG + L+LL E P  + V  +I+ ++++ A  
Sbjct: 105 FLVQAVLS-------RFKAGTFLDWGTGTGCIALSLLTEQPKARAVMAEINPRSIKCAWE 157

Query: 140 NAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           N    G+  R     S     + G  FD+I+SNPPY+ S  VD L  EV  ++PR++LDG
Sbjct: 158 NLKEAGLLSRALLWHSRTPDDIPGGPFDLIISNPPYVPSGQVDGLMPEVSQWEPRVALDG 217

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DGL  Y  +       L   GL +VE G   +V  +R   +  L  +    D  G  R
Sbjct: 218 GPDGLVPYGPLIYFARSRLVPGGLLAVEFGGASQVQSLRQM-AEGLSELECGADLSGEKR 276

Query: 259 VLLF 262
             L+
Sbjct: 277 YFLW 280


>gi|225076162|ref|ZP_03719361.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens
           NRL30031/H210]
 gi|224952505|gb|EEG33714.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens
           NRL30031/H210]
          Length = 270

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L   +G +  Q++      + D  R  +     R L  E +  ILG R+FY    
Sbjct: 16  EARMLLQYASGYTRVQLLTRGGEEIPDEVRQRVDRLAQRRLNGEPVAYILGVREFYGRCF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE LV++ LA  LP     +  R+ DLGTG+GA+ + +  E       
Sbjct: 76  AVNPSVLIPRPETEHLVEAVLA-RLP-----ENGRVWDLGTGSGAIAVTVALERVDADVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC 182
             DIS  AL+ A+ NA   G    F   Q  WF +    EG +DVIVSNPPYIE      
Sbjct: 130 ASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDRPSEGRYDVIVSNPPYIEDGDEHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I    
Sbjct: 188 SQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIMLEN 246

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   +D  G DR+ L
Sbjct: 247 GFAEVATEQDLAGLDRITL 265


>gi|154707092|ref|YP_001425369.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii Dugway 5J108-111]
 gi|154356378|gb|ABS77840.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii Dugway 5J108-111]
          Length = 277

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 9/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L+  Q+  L+  + R LK E I  ILG ++F+++ L ++ D   PRPETE+LV   
Sbjct: 45  PEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVGWI 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP+ EK   +RI DLGTG+GAV LA+  E P +     D S  AL+IA+ NA  + 
Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  +    +W  ++    +  IV NPPYI         L+    +PR +L  G DGLS
Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + I      +L   G   +E GY+Q   ++ + ++     +   +D  G  R+++  R
Sbjct: 217 AIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276


>gi|313903649|ref|ZP_07837039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466202|gb|EFR61726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter subterraneus DSM 13965]
          Length = 331

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 114/249 (45%), Gaps = 10/249 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +   +++ +P++ L           ++R  + E +  IL   +F+     ++  T  PRP
Sbjct: 82  MPGARLLAEPEAPLPPAAWARFVQWVLRRARREPVAYILQRAEFFGRPFRVTPATLIPRP 141

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV++ L     R    +   + DLGTGTG V + L  E P +  +  D S +AL++
Sbjct: 142 ETEVLVEAVL-----RTLSPEPAVVADLGTGTGIVGVTLAAERPLWTVLVTDCSARALKV 196

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ NA  +GV+ R      DW   +      G    + SNPPY+ S  +  L  EV  ++
Sbjct: 197 ARDNAARHGVAARMQFWAGDWAEPLLAGGWAGKLAAVASNPPYVASGDLRQLQAEVYRYE 256

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++L  G  GL  Y  +  G  R L   G   +E+G  Q   V  +  +     +  + 
Sbjct: 257 PHLALCPGPTGLEAYHRLIPGAVRLLAPGGWIFLEVGAGQAAAVRHLLGAVGCRNLCQWP 316

Query: 252 DYGGNDRVL 260
           D  G  RV+
Sbjct: 317 DLAGIPRVV 325


>gi|150026062|ref|YP_001296888.1| methylase of polypeptide chain release factors [Flavobacterium
           psychrophilum JIP02/86]
 gi|149772603|emb|CAL44086.1| Methylase of polypeptide chain release factors [Flavobacterium
           psychrophilum JIP02/86]
          Length = 285

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 127/245 (51%), Gaps = 12/245 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +++ PD  LD+ Q       +++  + + I  ILG   F+ +   ++ +T  PRPETE L
Sbjct: 42  LVLSPDLKLDNIQLLQWETVLLQLKEQKPIQYILGETQFFGLPFYVNENTLIPRPETEEL 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+  +  +L +I     ++ILD+GTG+G + ++L K  P      +D+S KAL  A+ NA
Sbjct: 102 VEWIIKENL-KISSLKNLKILDIGTGSGCIAISLAKNLPNASVFAIDVSDKALATAQKNA 160

Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196
           V N V   F   + LQ++    +   FD+IVSNPPY+ ++    +   V +++P ++L  
Sbjct: 161 VLNEVDITFIEKNILQTE---DLNQEFDIIVSNPPYVRNLEKKEIHKNVLEYEPHLALFV 217

Query: 197 -DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            D   D L  YR I +  +R+L+ +G    EI      + V + E          KD  G
Sbjct: 218 EDN--DSLLFYRKITELATRNLSNNGQLYFEINQYLGKETVELLEKYNFKNTTLKKDIYG 275

Query: 256 NDRVL 260
           NDR++
Sbjct: 276 NDRMI 280


>gi|21674307|ref|NP_662372.1| HemK protein [Chlorobium tepidum TLS]
 gi|21647480|gb|AAM72714.1| hemK protein [Chlorobium tepidum TLS]
          Length = 294

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 123/257 (47%), Gaps = 8/257 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V GL   Q+ +D +  L  ++      A    L+   +  I G   FY  +  +  
Sbjct: 35  LLGHVLGLQRLQLYLDHERPLTLKELEAFRAACRERLQGRPVQYIAGEAFFYGYQFFVDE 94

Query: 70  DTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PRPETEL+++ A+   +   ++  D   ILD+GTG+G + + L    P  +    D
Sbjct: 95  RVLIPRPETELVLEHAMERLAASGLDSADSPSILDVGTGSGCIAITLALRLPGARVTAAD 154

Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           +S  AL++A+ NA  +GVSER      D L + +  +V G FD++VSNPPYI       L
Sbjct: 155 VSADALDVARRNADAHGVSERIRFVEADALSASFADAVGGPFDLLVSNPPYIPEAEWATL 214

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR ++PR++L     G  +Y++IA      L K G+   E+  +   +V  +  S  
Sbjct: 215 QEEVRRYEPRLALVAPT-GFEYYQSIAVAAPSLLRKGGVLCFELHADGAAEVRNLLGS-S 272

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   +DY   DR L
Sbjct: 273 FADVQVMQDYNKLDRGL 289


>gi|22299379|ref|NP_682626.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1]
 gi|22295562|dbj|BAC09388.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1]
          Length = 291

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 26/273 (9%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVD----------PDSVLDDR-QRFFLTNAIVRSLKHESIH 52
           LR+   FL   TGLS  ++ +           P + L +R QR        R  +   + 
Sbjct: 26  LRELKQFLRAFTGLSPLEITLRRFPPQIHLKLPLTELQERWQR--------RWQERVPLQ 77

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            ++G   ++++ L ++     PRPETE L+ + +A ++P  +++     LDLGTG+GA+ 
Sbjct: 78  YLIGVAHWHDLELVVTPSVLIPRPETEELL-AVVAATVPPWQQQG--HWLDLGTGSGAIA 134

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIV 169
           + L +  P      VD S +ALE+A+ N     + +R      +WF  +   +G    IV
Sbjct: 135 IGLARLFPAALIHAVDCSSEALEVAQVNIQKYALGDRVRCYVGNWFDPIVPLQGQVQGIV 194

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI + +V  L  EV+  +P ++LDGG DGL   R I +    +L   G   +E+  
Sbjct: 195 SNPPYIPTSVVATLQPEVQYHEPLLALDGGTDGLQAIRQILETAPEYLQPQGWLFIELMA 254

Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261
            Q   V  +  + + +  V   +D  G+DR LL
Sbjct: 255 TQGKAVAALAMATQAYERVEILRDLSGHDRFLL 287


>gi|295094044|emb|CBK83135.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coprococcus sp. ART55/1]
          Length = 287

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 5/240 (2%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++   D V DD+   ++     RS +   +  I G ++F       + D   PR +TE L
Sbjct: 42  IMAREDDVDDDKSEAYMKLIEKRSTRI-PLQYITGEQNFMGYDFDTAEDVLIPRMDTETL 100

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN- 140
           V++AL          DV   LD+  G+G + ++    +   + V  D+S  A+ +A+ N 
Sbjct: 101 VETALKLVKDADHNVDV---LDMCCGSGCIGVSFGLWNKNSRIVLADVSEAAIGLARRNV 157

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A      +RF+ +++D F  + G +D+I+SNPPYI S +++ L  EVR+ +P ++LDG  
Sbjct: 158 AKLCAGDDRFEVVRTDLFEQISGKYDLILSNPPYIRSDVIETLMPEVREHEPHLALDGTA 217

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL  YR IAD    ++  +G    EIG +Q  DV  +        ++  +D  GNDRV+
Sbjct: 218 DGLYFYRIIADKAREYIKDEGYVVFEIGNDQAEDVQYLLVDSGYDDIHVVQDLSGNDRVV 277


>gi|258406202|ref|YP_003198944.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfohalobium retbaense DSM 5692]
 gi|257798429|gb|ACV69366.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfohalobium retbaense DSM 5692]
          Length = 300

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 5/222 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  K E +  I+G ++FY +   +      PRPETE ++D+   +  P      + R  D
Sbjct: 76  RRSKFEPVAYIVGCKEFYGLDFHVRPGVLIPRPETETIIDAVREWFTPE----SIFRFAD 131

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVE 162
             TG+G + + L    P  +GV +DIS +AL IA+SN   +G+ +R   +Q D    +  
Sbjct: 132 TCTGSGILGVVLATYFPRSQGVLIDISDEALAIARSNVQLHGLKQRLLAVQGDLLHPTAR 191

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
              D++V+NPPY+    V+    +VR  +PR++L+GG  G    + + +   R L   G+
Sbjct: 192 NQLDLVVANPPYLAPREVEETMPDVRLHEPRLALEGGDTGCLFLQRLVEQAQRALKPGGM 251

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             VE+G+ Q+  V   F           KD  G+DRV++  R
Sbjct: 252 VCVEMGWQQEQWVQGQFHGPAWERTAVLKDLAGHDRVVVAHR 293


>gi|88803654|ref|ZP_01119178.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P]
 gi|88780387|gb|EAR11568.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P]
          Length = 301

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 124/262 (47%), Gaps = 29/262 (11%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
            +++PD ++ D     L   I R  K E I  ILG  +FY +   ++ +T  PRPETE L
Sbjct: 48  TVLNPDLIIGDVLVTSLKKIIDRLQKEEPIQYILGNTEFYGLPFLVNKNTLIPRPETEEL 107

Query: 82  VDSAL----------------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           V   L                A   P       + ILD+GTGTG + ++L K SP  +  
Sbjct: 108 VSWVLHEIKEIHGEHKNKATNAIETP-------LTILDIGTGTGCISVSLAKNSPQSEIT 160

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCL 183
            +D S  AL IAK NA+ N V+  F  +Q D   + E    FD+I+SNPPY+  +    +
Sbjct: 161 AIDNSATALHIAKKNALLNNVAVNF--IQLDILKTTELPQKFDIIISNPPYVRELEKVEI 218

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V   +P ++L     + L  Y  IAD   + L K+GL   EI      + +++   +
Sbjct: 219 NKNVLANEPHLALFVSDENPLLFYDKIADLAIQGLTKNGLLFFEINQYLAKETIKMLTKK 278

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +   KD  GNDR+LL CR
Sbjct: 279 GFHSIQLKKDLFGNDRMLL-CR 299


>gi|120600165|ref|YP_964739.1| HemK family modification methylase [Shewanella sp. W3-18-1]
 gi|146291907|ref|YP_001182331.1| HemK family modification methylase [Shewanella putrefaciens CN-32]
 gi|120560258|gb|ABM26185.1| modification methylase, HemK family [Shewanella sp. W3-18-1]
 gi|145563597|gb|ABP74532.1| modification methylase, HemK family [Shewanella putrefaciens CN-32]
 gi|319425198|gb|ADV53272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella putrefaciens 200]
          Length = 282

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 129/259 (49%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+  FL      +   +   P+  L  D  +RF     +++  K   +  I+G R+F+++
Sbjct: 28  DAEVFLLYCLNKNRAYLYTWPEKALTIDQWKRF--QQMVLKRQKGVPVAHIVGEREFWSL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++  T  PRP+TE+LV++AL   L    K     +LDLGTGTGA+ LAL  E   ++
Sbjct: 86  PFIVNDTTLIPRPDTEILVETALNLPLSTYAK-----VLDLGTGTGAIALALASERESWE 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VD    A+ +A +N   N    + + LQSDWFS+V+   FD+IVSNPPYI+      
Sbjct: 141 ITAVDKVDDAVALAIANR-ENLKLPQVEILQSDWFSAVKSRDFDLIVSNPPYIDEADEHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +       
Sbjct: 200 HQGDVR-FEPQSALTAAEEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRGKLIEL 258

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   +D+G NDR  +
Sbjct: 259 GYENVATVRDFGSNDRCTM 277


>gi|93005985|ref|YP_580422.1| HemK family modification methylase [Psychrobacter cryohalolentis
           K5]
 gi|92393663|gb|ABE74938.1| modification methylase, HemK family [Psychrobacter cryohalolentis
           K5]
          Length = 308

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 22/225 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-----RDVVRILDLGTGT 108
           + G + F+++   ++  T  PRP+TE+LV+  L +     E+      +  R+LDLGTG+
Sbjct: 79  LTGIQAFWSLDFAVNEHTLIPRPDTEVLVEQVLHWINTANEEFVPNAANNKRLLDLGTGS 138

Query: 109 GAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           G + ++L  E           ++ V VD S +AL+IA+ NAV+N V   F  + S W+ +
Sbjct: 139 GCIAISLAHELKLARKLEPVSWQVVAVDFSLEALKIAQHNAVSNAVDIEF--VHSSWYDA 196

Query: 161 V----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +    E LFDVIVSNPPYI+       GL     +P  +L     GL+    I     ++
Sbjct: 197 LSTQDEHLFDVIVSNPPYIDEADEHLAGLLA---EPISALSAPNHGLADIEHIVHHAPQY 253

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L   GL ++E G++Q     ++F       +   KD+GGNDRV L
Sbjct: 254 LKVGGLLAIEHGFDQGHAARQLFADNHFDNIQTIKDFGGNDRVTL 298


>gi|261381287|ref|ZP_05985860.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava
           NJ9703]
 gi|284795767|gb|EFC51114.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava
           NJ9703]
          Length = 270

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R LK E +  +LG R+FY  R T++     PR ETE LV++ L   LP        R+ D
Sbjct: 54  RRLKGEPMAYLLGEREFYGRRFTVNPHVLIPRHETEHLVEAVLK-RLP-----SQGRVWD 107

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GA+ + +  E         DIS  AL+ A+ NA   G    F   Q  WF +   
Sbjct: 108 LGTGSGAIAVTIALERGDADVRASDISVGALDTARQNAAELGAKVEF--AQGSWFDTDKP 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG +DVIVSNPPYIE         ++R F+P+ +L    DGLSH R I     ++L  +
Sbjct: 166 SEGRYDVIVSNPPYIEDGDEHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKAN 224

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G    E GY+Q   V  I        V   +D  G DRV L
Sbjct: 225 GWLLFEHGYDQGKAVRNIMLENGFAEVATEQDLAGLDRVTL 265


>gi|116333898|ref|YP_795425.1| methylase of polypeptide chain release factor [Lactobacillus brevis
           ATCC 367]
 gi|116099245|gb|ABJ64394.1| Methylase of polypeptide chain release factor [Lactobacillus brevis
           ATCC 367]
          Length = 283

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 113/221 (51%), Gaps = 9/221 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E    +LG+  FY     ++  T  PRPETE LV+  L     ++ ++   ++
Sbjct: 62  LARVCAGEPAQYVLGYAPFYGREFQVTPATLIPRPETEELVEWVL-----QVVRQPAAKV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+GTG+GA+ + L KE P +     DIS  A+ +A+ NA    ++ +      D  + V
Sbjct: 117 IDVGTGSGAIAVTLKKERPMWLVTATDISDAAIAVAQKNA--QRLTAQLMWATGDLLAPV 174

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FDVIVSNPPYI+   +  +   V+ ++P  +L     GL+ Y+  A  ++ +L   
Sbjct: 175 TGQRFDVIVSNPPYIDRTEMPEMDTSVKRYEPEQALYAADHGLAFYQRFAQVLTTYLVPT 234

Query: 221 GLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           G    EIGY+Q   V +IF ++     V    D  G+DR++
Sbjct: 235 GDFFAEIGYHQGAAVKQIFKQALPDAQVTVKSDINGHDRMI 275


>gi|303234963|ref|ZP_07321587.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna BVS033A4]
 gi|302493818|gb|EFL53600.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna BVS033A4]
          Length = 263

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 120/215 (55%), Gaps = 11/215 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG++ FYN +    S    PR +TE+LVD  +  +      R    IL++G G+G 
Sbjct: 59  IEYILGFKYFYNRKFYTDSSVLIPRFDTEILVDEIININ------RKFENILEIGIGSGI 112

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169
           + + L  E    K +GVDI+ KA+E++K NA + N  +  F  + SD + +V   FD+IV
Sbjct: 113 ISITLNLELNS-KVLGVDINEKAIELSKKNAESLNATNVEF--IYSDLYENVNSKFDLIV 169

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI+    + L  ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGY
Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           NQ+  +  I +          KD+ G DRV++  R
Sbjct: 229 NQRESIFEILDENGFENHYCIKDFNGFDRVIIARR 263


>gi|295400674|ref|ZP_06810651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977255|gb|EFG52856.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 288

 Score =  112 bits (279), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC    ++  Q++      +D+  R      I + + +H  +  + G+  FY  
Sbjct: 24  RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHVYEHVPVQHLTGFEQFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETE LV+  L        +   V ++D+GTG+GA+ + L  E+P   
Sbjct: 84  LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +DIS +AL++A+ NA   G    F   D LQ           DV+VSNPPYI    +
Sbjct: 144 ITAIDISAEALQMAEQNAKRLGADVAFICGDLLQP--LIEANRKVDVVVSNPPYIPEDEI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D +P  +L GG DGL  YR++   +   L +  L + E+G  Q   V  +  
Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAML- 260

Query: 241 SRKLF---LVNAFKDYGGNDRVL 260
            RK F    V    D  G DR++
Sbjct: 261 -RKTFPHAKVEVVFDINGKDRMV 282


>gi|299531472|ref|ZP_07044878.1| modification methylase, HemK family protein [Comamonas testosteroni
           S44]
 gi|298720435|gb|EFI61386.1| modification methylase, HemK family protein [Comamonas testosteroni
           S44]
          Length = 285

 Score =  112 bits (279), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 11/213 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           + G ++FY + L + S   +PRP+TE LVD AL   LP        R++DLGTG+GA+ L
Sbjct: 78  LTGSKEFYGLDLAVDSRVLDPRPDTETLVDWALEL-LPEGAAH---RVVDLGTGSGAIAL 133

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSN 171
           AL  + P  + + VD S  AL +A SNA    +  +F      W   ++G    D+IVSN
Sbjct: 134 ALQSQRPSARVIAVDASADALAVASSNAARLQLPVQF--AHGSWLQPLDGQEPVDLIVSN 191

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI +   D   L     +P  +L  G DGL   R+I D     L   G    E G++Q
Sbjct: 192 PPYIRA---DDPHLAALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQ 248

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             DV ++ ++     V    D  G  R    CR
Sbjct: 249 AEDVAQLMQAAGFEQVQHRHDLAGIARCTGGCR 281


>gi|116618872|ref|YP_819243.1| methylase of polypeptide chain release factor [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097719|gb|ABJ62870.1| Methylase of polypeptide chain release factor [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 330

 Score =  112 bits (279), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +K++    ILG   FY     +      PRPETE LV+  L  +      +  V +LD+G
Sbjct: 114 VKNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIG 170

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164
           TG+GA+   L+ E+   KG   DIS  AL +A+ NA    +S     ++SD FS++ GL 
Sbjct: 171 TGSGAIIETLMLENDRVKGFAADISQDALTVAEMNAQRFNLS-HLHFVESDVFSALSGLK 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+IVSNPPYI +   + +   V  F+P  +L    DGL+ Y+ IA G+  HL + G   
Sbjct: 230 FDLIVSNPPYISNSDENEMDDSVLTFEPHTALFAENDGLAIYKKIARGLDAHLTEHGRAY 289

Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
            EIGY Q   V ++ ++      +   +D+ G DR++
Sbjct: 290 FEIGYKQGKAVQQLLQAALPKAKITLRQDFSGLDRMI 326


>gi|120612309|ref|YP_971987.1| HemK family modification methylase [Acidovorax citrulli AAC00-1]
 gi|120590773|gb|ABM34213.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax
           citrulli AAC00-1]
          Length = 311

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 108/217 (49%), Gaps = 10/217 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R    E +  + G ++FY + L + +   +PRP+TE LVD AL      +    + R+ 
Sbjct: 70  ARRQAGEPVAYLTGRKEFYGLPLQVDARVLDPRPDTETLVDWALEV----LRPLPLPRVA 125

Query: 103 DLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           DLGTG+GA+ LAL    P  + V  VD S  AL +A++NA    +S   D ++++W   +
Sbjct: 126 DLGTGSGAIALALRHGLPGAQVVLAVDASADALAVARANARRLHLS--VDFVRTNWLDGI 183

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G FD IVSNPPYIE    D   L     +PR +L  G DGL   RTI    S  L   G
Sbjct: 184 SGPFDAIVSNPPYIEE---DDPHLAALVHEPRQALASGPDGLDDIRTIVVQSSSRLAPGG 240

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              +E G+NQ   V  +  +     V +  D  G+ R
Sbjct: 241 WLLLEHGWNQAQAVQALLRNAGYAEVQSRADLAGHAR 277


>gi|225374518|ref|ZP_03751739.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM
           16841]
 gi|225213756|gb|EEG96110.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM
           16841]
          Length = 164

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/162 (41%), Positives = 92/162 (56%), Gaps = 2/162 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +++LD+ TG+G + +++L      KG  VDIS +A+ +AK NA  N V   F+  +SD F
Sbjct: 1   MKVLDMCTGSGCIIISILHNVEGVKGYAVDISKQAVNVAKENAKLNEVPVLFE--RSDLF 58

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             V   FDVIVSNPPYI + ++  L  EV+ F+P  +LDG  DGL  YR I +    +LN
Sbjct: 59  EMVTEKFDVIVSNPPYIPTDVIPQLMPEVQVFEPVEALDGKEDGLYFYRKIVEQSRDYLN 118

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             G    EIGY+Q  DV  +        V   KD  GNDRV+
Sbjct: 119 PGGYLMFEIGYDQGKDVSEMMTDAGFSDVCVKKDLAGNDRVV 160


>gi|332878223|ref|ZP_08445951.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683835|gb|EGJ56704.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 281

 Score =  111 bits (278), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 9/223 (4%)

Query: 43  VRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           +R L+ H+ I  ILG   F++ R  +  +   PRPETE LVD  L    P  +    ++I
Sbjct: 62  IRELQNHKPIQYILGETVFFSYRFLVDENVLIPRPETEELVDWVLTTVTPTSKP---LKI 118

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--S 159
           +D+GTG+G + ++L K  P  +   VD+S KAL++A+ NA  NGV+  F  LQ D    S
Sbjct: 119 IDIGTGSGCIAISLAKSLPNAEVTAVDVSAKALQVARRNAELNGVTINF--LQQDILQTS 176

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218
           ++   +D+I+SNPPY+ S+    +   V +++P ++L     D L  Y  IA    + L+
Sbjct: 177 TLPDTYDIIISNPPYVRSLEKAEMQANVLEYEPHLALFVSDTDPLLFYDRIATLARKALS 236

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             G    EI      + + + +++    V   +D  GNDR+++
Sbjct: 237 PQGSLFFEINQYLGDETIALLKAKGFEKVVLRQDLSGNDRMIM 279


>gi|298529664|ref|ZP_07017067.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511100|gb|EFI35003.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 279

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 12/246 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V+V  D   D+ +R +    I R  + E +  ILG ++FY++   +S     PRPETELL
Sbjct: 43  VLVFQDQTSDEIRRHY-EELIARRSRGEPVAYILGRKEFYSLDFQVSPQVLIPRPETELL 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKS 139
           V+  +  S  R +K+      DLGTG+G   +C+AL  +   F  +  DIS +AL +A+S
Sbjct: 102 VE-LVGNSYSRQQKKIFA---DLGTGSGILGICIAL--DFSLFLCLACDISKQALAVARS 155

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  + VS+R    + D  + ++    D IV NPPYI       L  EVR+F+P  +L  
Sbjct: 156 NARRHRVSDRILFFRGDMGAGIKPQSLDFIVCNPPYISVREFAGLEAEVRNFEPGQALLS 215

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G  GL H + +    +R L   G   +E+G  Q   V RIF   +    + ++D  G DR
Sbjct: 216 GERGLGHIKRLEQEAARLLRGSGRVFLEMGSTQADHVRRIFS--RWSSCHIYQDLAGLDR 273

Query: 259 VLLFCR 264
             + C+
Sbjct: 274 AAVVCK 279


>gi|169824786|ref|YP_001692397.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC
           29328]
 gi|167831591|dbj|BAG08507.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC
           29328]
          Length = 263

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 11/212 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG++ FYN +    S    PR +TE+LVD  +  +      R    IL++G G+G 
Sbjct: 59  IEYILGFKYFYNRKFYTDSSVLIPRFDTEILVDEIIKIN------RKFENILEIGIGSGI 112

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIV 169
           + + L  E    K +GVDI+ KA+E++K NA + N  +  F  + SD + +V   FD+IV
Sbjct: 113 ISITLNLELNS-KVLGVDINKKAIELSKKNAESLNATNVEF--IYSDLYENVNYKFDLIV 169

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI+    + L  ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGY
Sbjct: 170 SNPPYIDKKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGY 228

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           NQ+  +  I +          KD+ G DRV++
Sbjct: 229 NQRESIFEILDENGFENHYCIKDFNGFDRVII 260


>gi|163858861|ref|YP_001633159.1| heme biosynthesis protein [Bordetella petrii DSM 12804]
 gi|163262589|emb|CAP44892.1| heme biosynthesis protein [Bordetella petrii]
          Length = 275

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 110/221 (49%), Gaps = 13/221 (5%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  ++G R+F      ++ D   PRPETELLV++ALA+    +  R    +L
Sbjct: 59  TRRLAGEPMAYLVGHREFMGHDFAVTPDVLIPRPETELLVETALAW----LADRPEAAVL 114

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV- 161
           DLGTG+G + +++   +P       D S  AL++A  NA   G   R D  Q  W+ ++ 
Sbjct: 115 DLGTGSGVIAVSIALGAPRAAVTATDASAAALQVAVRNAARLGA--RVDFAQGSWYDALP 172

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLN 218
               +D+IVSNPPYI     D   L+  D  F+PR +L  G DGL     I  G +  L 
Sbjct: 173 ARARYDLIVSNPPYIAR---DDQHLDQGDLRFEPRNALTDGADGLRDLAVIVAGAAARLR 229

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
             G   VE G++Q   V ++  +     + + +D  G +R+
Sbjct: 230 PGGALWVEHGWDQAAAVRQLLAAAGFDQITSRRDLSGIERI 270


>gi|126441418|ref|YP_001060596.1| putative protein hemK [Burkholderia pseudomallei 668]
 gi|126452796|ref|YP_001067846.1| protein hemK [Burkholderia pseudomallei 1106a]
 gi|134283321|ref|ZP_01770022.1| HemK-like protein [Burkholderia pseudomallei 305]
 gi|167825995|ref|ZP_02457466.1| protein methyltransferase HemK [Burkholderia pseudomallei 9]
 gi|167847482|ref|ZP_02472990.1| protein methyltransferase HemK [Burkholderia pseudomallei B7210]
 gi|167896070|ref|ZP_02483472.1| protein methyltransferase HemK [Burkholderia pseudomallei 7894]
 gi|167904456|ref|ZP_02491661.1| protein methyltransferase HemK [Burkholderia pseudomallei NCTC
           13177]
 gi|167912717|ref|ZP_02499808.1| protein methyltransferase HemK [Burkholderia pseudomallei 112]
 gi|167920677|ref|ZP_02507768.1| protein methyltransferase HemK [Burkholderia pseudomallei BCC215]
 gi|226198254|ref|ZP_03793825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813981|ref|YP_002898432.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei MSHR346]
 gi|242318052|ref|ZP_04817068.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106b]
 gi|254198427|ref|ZP_04904848.1| putative protein hemK [Burkholderia pseudomallei S13]
 gi|254300724|ref|ZP_04968169.1| protein Hemk [Burkholderia pseudomallei 406e]
 gi|126220911|gb|ABN84417.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 668]
 gi|126226438|gb|ABN89978.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106a]
 gi|134245516|gb|EBA45609.1| HemK-like protein [Burkholderia pseudomallei 305]
 gi|157810623|gb|EDO87793.1| protein Hemk [Burkholderia pseudomallei 406e]
 gi|169655167|gb|EDS87860.1| putative protein hemK [Burkholderia pseudomallei S13]
 gi|225929774|gb|EEH25790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei Pakistan 9]
 gi|237504345|gb|ACQ96663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei MSHR346]
 gi|242141291|gb|EES27693.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106b]
          Length = 285

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 84  DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139

Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177
            ++ S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI  
Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           + ++     V +  D    +R 
Sbjct: 257 LLDAAGFADVESRADLASIERA 278


>gi|53720683|ref|YP_109669.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243]
 gi|76809364|ref|YP_334969.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b]
 gi|217424835|ref|ZP_03456332.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 576]
 gi|254190472|ref|ZP_04896980.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254258481|ref|ZP_04949535.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1710a]
 gi|52211097|emb|CAH37085.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243]
 gi|76578817|gb|ABA48292.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b]
 gi|157938148|gb|EDO93818.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237]
 gi|217392291|gb|EEC32316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 576]
 gi|254217170|gb|EET06554.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1710a]
          Length = 285

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 84  DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVW 139

Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177
            ++ S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI  
Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRT 256

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           + ++     V +  D    +R 
Sbjct: 257 LLDAAGFADVESRADLASIERA 278


>gi|325694523|gb|EGD36432.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK150]
          Length = 276

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 12/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L H+    I+G  DF+ + L +      PRPETE LV+  L+ +         + +LD+G
Sbjct: 63  LAHKPAQYIIGSSDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIG 117

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LAL    P ++    D+S  AL +A  NA +  +S  F  +QSD   ++   F
Sbjct: 118 TGSGAIALALANSRPNWQITASDLSDDALALAAENAQSCNLSLTF--VQSDCLDAISVNF 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI     D +GL V   +P ++L    D  + YR IA     +L + G   +
Sbjct: 176 DIIVSNPPYISEADKDEVGLNVLTSEPHMALFAEEDSYAVYRKIAGQAGDYLTEKGKIYL 235

Query: 226 EIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           EIGY Q   V  +   +K F    +   KD  G DR++
Sbjct: 236 EIGYKQGDGVRELL--KKSFPQKRIRVLKDQFGKDRMV 271


>gi|320528630|ref|ZP_08029783.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei
           F0204]
 gi|320130996|gb|EFW23573.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei
           F0204]
          Length = 284

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 115/229 (50%), Gaps = 22/229 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVV 99
           R LK E +  +LG+  FY  ++ ++ D   PR ETE L     A  L RI++    ++ V
Sbjct: 62  RILKQEPMSHVLGYSWFYGYKMIVNEDVLIPRCETEELC----ALILSRIDEIFPTQETV 117

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156
              D+GTG+GA+ + + KE    K    DIS +AL  A+ NA  N V   F   D LQ  
Sbjct: 118 ECADVGTGSGAIAITVAKEESRVKMHATDISEEALVTARQNAKNNEVDIDFTAGDMLQP- 176

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                    DV++SNPPYI     + +   V DF+P ++L GG DGL  YR I     + 
Sbjct: 177 -LIDANRHLDVLISNPPYIPQD--EQMETSVVDFEPHVALFGGEDGLKFYRMIFKDCKKV 233

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA----FKDYGGNDRVLL 261
           LNK    + E+G++Q+  + ++ E     L +A     KD  G DR+L 
Sbjct: 234 LNKKAFMAFEMGWDQRERMSKLVEE---LLPDARYEMLKDMNGKDRMLF 279


>gi|212213423|ref|YP_002304359.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuG_Q212]
 gi|212011833|gb|ACJ19214.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuG_Q212]
          Length = 277

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 9/240 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L+  Q+  L+  + R +K E I  ILG ++F+++ L ++ D   PRPETE+LV+  
Sbjct: 45  PEIQLNSSQQKTLSAYVKRRVKGEPIAYILGQKEFWSLNLKVTPDVLIPRPETEMLVEWI 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP+ EK   +RI DLGTG+GAV LA+  E P +     D S  AL+IA+ NA  + 
Sbjct: 105 LK-NLPKDEK---LRIADLGTGSGAVALAIAVERPHWTIDATDNSQAALKIAEINAKQHE 160

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +  +    +W  ++    +  IV NPPYI         L+    +PR +L  G DGLS
Sbjct: 161 I-KNCNFYHGEWCQALPRRDYHAIVGNPPYIPD---KDQHLQQLKHEPREALAAGSDGLS 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + I      +L   G   +E GY+Q   ++ + ++     +   +D  G  R+++  R
Sbjct: 217 AIKIIIHEAKSYLVNGGRLLLEHGYDQAEKIMTLMQADGYREITDRRDLAGLSRMMVARR 276


>gi|71900252|ref|ZP_00682389.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71729965|gb|EAO32059.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 275

 Score =  111 bits (278), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 7/207 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R F+ + + +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ L
Sbjct: 67  LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
           A+  E P  + +  D S  AL+IA  NA  +G++      + +W+ ++ G  FD+IVSNP
Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGNWYEALLGERFDLIVSNP 181

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI          ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q 
Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQG 240

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             +  +  +  L  V   +D    DRV
Sbjct: 241 AAMRTLLHTAGLVAVATVQDLEARDRV 267


>gi|83747501|ref|ZP_00944539.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia
           solanacearum UW551]
 gi|207744460|ref|YP_002260852.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum IPO1609]
 gi|83725815|gb|EAP72955.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia
           solanacearum UW551]
 gi|206595866|emb|CAQ62793.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum IPO1609]
          Length = 309

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 123/260 (47%), Gaps = 15/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+    
Sbjct: 45  EARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFGRLF 104

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ AL     RIE RD   +LDLGTG+G  AV +AL +     +
Sbjct: 105 QVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRD--AR 158

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178
               D S  AL +A  NA T   +     L  DW+     S     FD+IVSNPPYI S 
Sbjct: 159 VWATDASADALAVAAGNAQTLDAANVHVAL-GDWYGALPESDAPPAFDLIVSNPPYIASA 217

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +
Sbjct: 218 DAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRAL 276

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                   V   +D  G+DR
Sbjct: 277 LAEAGFADVFTAQDLAGHDR 296


>gi|126172945|ref|YP_001049094.1| HemK family modification methylase [Shewanella baltica OS155]
 gi|125996150|gb|ABN60225.1| modification methylase, HemK family [Shewanella baltica OS155]
          Length = 282

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L   Q       + +  K   +  I+G R+F+++   ++  T  PRP+TE+LV++A
Sbjct: 48  PEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWSLPFIVNDTTLIPRPDTEILVETA 107

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L          +LDLGTGTGA+ LAL  E   ++   VD    A+ +A +N   N 
Sbjct: 108 LNMPL-----STYANVLDLGTGTGAIALALASERESWQITAVDKVDDAVALAIANR-ENL 161

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              + D LQSDWFS+V+   FD+IVSNPPYI+         +VR F+P+ +L    +G +
Sbjct: 162 KLPQVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEHLHQGDVR-FEPQSALTAAEEGFA 220

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               IA+    +L  +G   +E G+ Q V +           V   +D+G NDR  +
Sbjct: 221 DLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIELGYENVATVRDFGSNDRCTM 277


>gi|332967821|gb|EGK06920.1| protein methyltransferase HemK [Kingella kingae ATCC 23330]
          Length = 269

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 116/258 (44%), Gaps = 11/258 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  +TGLS  Q+I      L       L     R  + E I  +LG R+FY    
Sbjct: 17  ETRMLLQYITGLSRSQLITHDSETLSPEHESSLHALCQRREQGEPIAYLLGEREFYGRSF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+S     PRPETE L+++AL     R+  R    + D+GTG+G + ++   E       
Sbjct: 77  TVSPAVLIPRPETEHLLEAALC----RLPARGF--LWDMGTGSGIIAISAKLERTDANVF 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
             DIS  AL IA+ NA   G +  F   Q  WF        FDVI SNPPYI S      
Sbjct: 131 ASDISPDALNIAQHNAQRLGAAVAF--AQGSWFDCAVSAHKFDVIASNPPYINSHDTHLQ 188

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGL+H R I      +L   G   +E GY+Q   +  +F    
Sbjct: 189 QGDLR-FEPAHALTDFADGLAHIRHIVARAPDYLQPQGWLLLEHGYDQGAAIRDLFAQHG 247

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V   +D  G +RV L
Sbjct: 248 YTQVETLRDLAGLERVTL 265


>gi|33599374|ref|NP_886934.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
 gi|33566970|emb|CAE30883.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
          Length = 251

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  +LG R+F      L+ D   PRP+TELLV++AL +    ++ R   R+L
Sbjct: 35  ARRLAGEPMAYLLGGREFMGHWFALTPDVLIPRPDTELLVETALHW----LQGRAAPRVL 90

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ +++    P  +    D+S  AL +A+ NA   G   R   L  DW+ ++ 
Sbjct: 91  DLGTGSGAIAVSVALGCPQAEVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 148

Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D+IVSNPPYI          ++R F+PR +L    DGL+    IA G    L   
Sbjct: 149 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 207

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   +E G++Q      +     L  V++ +D  G +R+
Sbjct: 208 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 246


>gi|314937738|ref|ZP_07845060.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a04]
 gi|314942364|ref|ZP_07849211.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133C]
 gi|314952117|ref|ZP_07855136.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133A]
 gi|314992372|ref|ZP_07857804.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133B]
 gi|314997441|ref|ZP_07862388.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|313588450|gb|EFR67295.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|313593097|gb|EFR71942.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133B]
 gi|313595736|gb|EFR74581.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133A]
 gi|313598877|gb|EFR77722.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133C]
 gi|313642876|gb|EFS07456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a04]
          Length = 279

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 126/241 (52%), Gaps = 20/241 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + + ++ QR   T+  +    H   + +LG+ DFY+ RL ++  T  PRPETE LV+  L
Sbjct: 48  EEISEEEQRLIETDLRLLLADHPPQY-LLGYADFYDHRLKVTEATLIPRPETEELVEWCL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P +     + ++D+GTGTGA+ ++L      +    VD+S +ALE+AK NA   G 
Sbjct: 107 D-ETPGVP----LEVIDIGTGTGAIAISLKAARKNWHISAVDLSEEALEVAKENAQKEGT 161

Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              F   DTL       ++  FDVI+SNPPYI     + +   VR F+P+++L    DGL
Sbjct: 162 KISFYHGDTLGP----VMDQQFDVIISNPPYISRNEWELMDESVRSFEPKMALFAENDGL 217

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES----RKLFLVNAFKDYGGNDRV 259
           + Y  IA      L  +G   +EIG+ Q   V + F+     +K+ +    KD  GN+R+
Sbjct: 218 AIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKKFQQAFPDKKVAIK---KDLFGNERM 274

Query: 260 L 260
           +
Sbjct: 275 I 275


>gi|256848018|ref|ZP_05553462.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715078|gb|EEU30055.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 282

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 7/230 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  + G S   +++    V+ D ++     AI+R  K E    ++G   F+     ++ D
Sbjct: 31  LKMIHGWSDADLLMHNREVMSDDEKKRYQTAILRIAKDEPTQYVVGKAPFFGRTFVVNQD 90

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              P  ETE L++    + L  + +   +R+LDLGTG+G + + L  E P ++    DIS
Sbjct: 91  VLIPESETEDLIE----WVLQEMPQDQPLRVLDLGTGSGVIGITLSLECPRWRVTLSDIS 146

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A +N   +G + R  T++SD F+ ++G  FD+IV+NPPYI     + +   V  
Sbjct: 147 AGALRVATANQRLHGTNLR--TVESDLFTHLQGERFDLIVTNPPYISPNATELIDRAVIK 204

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++P ++L    +GL  Y  + D V  HL + G+   E G++Q+  + R+F
Sbjct: 205 YEPPLALFASENGLGFYHRLFDQVQDHLTEQGVLFGETGFDQEESIQRLF 254


>gi|33591872|ref|NP_879516.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
 gi|33571516|emb|CAE40990.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
 gi|332381289|gb|AEE66136.1| heme biosynthesis protein [Bordetella pertussis CS]
          Length = 270

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  +LG R+F      L+ D   PRP+TELLV++AL +    ++ R   R+L
Sbjct: 54  ARRLAGEPMAYLLGGREFMGHWYALTPDVLIPRPDTELLVETALHW----LQGRAAPRVL 109

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ +++    P  +    D+S  AL +A+ NA   G   R   L  DW+ ++ 
Sbjct: 110 DLGTGSGAIAVSVALGCPQAEVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 167

Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D+IVSNPPYI          ++R F+PR +L    DGL+    IA G    L   
Sbjct: 168 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 226

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   +E G++Q      +     L  V++ +D  G +R+
Sbjct: 227 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 265


>gi|190572887|ref|YP_001970732.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas
           maltophilia K279a]
 gi|190010809|emb|CAQ44418.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas
           maltophilia K279a]
          Length = 285

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 116/227 (51%), Gaps = 11/227 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  + G R F+ + L +   T  PRPETELLV+     +L R+     +++
Sbjct: 64  LARRVAGEPVAYLTGRRGFWTLDLEVDPATLIPRPETELLVE----LALERLPPDQSLQL 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
            DLGTG+GA+ LAL  E P  + +  D S  AL +A  NA  + +   RF     DW++ 
Sbjct: 120 ADLGTGSGAIALALASERPQAQVLATDASPGALAVAARNAARHDLRNVRFAEGGHDWYAP 179

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHL 217
           ++G  FD+I SNPPYI S   D   LE  D  F+P  +L  G DGL   R I DG   HL
Sbjct: 180 LQGARFDLIASNPPYIAS---DDPHLERGDLRFEPATALASGPDGLDDIRRIVDGGQAHL 236

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              G   +E G++Q   +  +F++     V   +D    DR+ L  R
Sbjct: 237 LPGGWLLIEHGWDQGEAIRALFDAAGFAEVQTVQDLEQRDRITLGRR 283


>gi|167564256|ref|ZP_02357172.1| protein hemK [Burkholderia oklahomensis EO147]
          Length = 288

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+    A  R    E + ++ G R+F+ +
Sbjct: 27  DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEA--RRAAGEPVAQLTGAREFFGL 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 85  EFEITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDAR 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              +D S  AL++A+ NA       R       L+SDW+++++    F VIVSNPPYI  
Sbjct: 141 VWALDRSAAALDVARRNARKLLAPARPGGPLQFLESDWYAALDSGRRFHVIVSNPPYIAR 200

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V  
Sbjct: 201 HDPHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAHAFLAPGGALWIEHGYDQAAAVRA 259

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
             E+     V +  D    +R 
Sbjct: 260 RLEAAGFADVESLADLASIERA 281


>gi|21910336|ref|NP_664604.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS315]
 gi|28895911|ref|NP_802261.1| protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1]
 gi|21904532|gb|AAM79407.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS315]
 gi|28811161|dbj|BAC64094.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1]
          Length = 279

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 7/185 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H S   I G   F +++L +      PRPETE LVD  LA +L        + +LD+GT
Sbjct: 64  QHLSPQYITGNAYFRDLKLAVDKRVLIPRPETEELVDMILAENLDA-----PLNVLDIGT 118

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+GA+ ++L KE   ++    DIS  AL++AK+NA    +   F  ++SD FS + G FD
Sbjct: 119 GSGAIAISLKKERSNWQVTASDISRAALDLAKANADAYQLDITF--IESDVFSLISGTFD 176

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI     + + L V   +P ++L    +G + YR I +    +L K+G    E
Sbjct: 177 IIVSNPPYISYEDKEEVSLNVLQSEPHLALFAKENGYAIYRKIIEQADNYLAKEGKLYFE 236

Query: 227 IGYNQ 231
           IGY Q
Sbjct: 237 IGYKQ 241


>gi|114330835|ref|YP_747057.1| modification methylase, HemK family protein [Nitrosomonas eutropha
           C91]
 gi|114307849|gb|ABI59092.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosomonas eutropha C91]
          Length = 293

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 123/257 (47%), Gaps = 11/257 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  + +  +I   + +L   Q       + R +  E +  + G R FY++  
Sbjct: 35  DARWLLQSVLNVDAAFLITHAELLLGMEQIVHFQQLLARRMAGEPVAYLTGERGFYDLVF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV+ AL+    +I       ILDLGTG+GA+ + + +  P     
Sbjct: 95  DVTPDVLIPRPETELLVEMALS----KIPPDRCCNILDLGTGSGAIAITIARHRPDIYVT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIES--VIVDC 182
            VD+S  AL +A+ NA    V E    +++DWFS  +   FDVIV+NPPYI      ++ 
Sbjct: 151 AVDLSPLALAVARRNAKRCSV-ENVVFIKADWFSGFISEKFDVIVANPPYIVEGDPHLEA 209

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            GL    F+P I+L    +GL   R I D    +L   G   +E GY+Q     R+ +  
Sbjct: 210 DGLR---FEPTIALVAQNNGLDCIRRIVDQAPDYLEHSGWLMLEHGYDQADVCRRLLDKT 266

Query: 243 KLFLVNAFKDYGGNDRV 259
               +    D  G DRV
Sbjct: 267 GFSHIFTRSDLAGIDRV 283


>gi|315641824|ref|ZP_07896828.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM
           15952]
 gi|315482499|gb|EFU73038.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM
           15952]
          Length = 277

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           + G   F+     +S  T  PRPETE LVD  L     +  + +   ++D+GTGTGA+ +
Sbjct: 73  LTGQEAFFGRTFVVSDATLIPRPETEELVDQCL-----KHVQSEACHVVDIGTGTGAIAV 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
            L  E P ++   VD+S +AL IA+ NA   G    F   DTL           +DVI+S
Sbjct: 128 TLKAERPLWQVAAVDLSSEALVIAQKNAKRIGSEVTFYHGDTL----VPVKNQTWDVIIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S     +   VR F+P+++L     GL+ Y+ IA      L ++G   +EIGY 
Sbjct: 184 NPPYISSDEWSIMDASVRQFEPKMALFADDQGLAMYKKIASQAQSCLAENGWLFLEIGYR 243

Query: 231 QKVDVVRIFESR-KLFLVNAFKDYGGNDRVLL 261
           Q   V +IF++      V   KD  G  R+++
Sbjct: 244 QGPAVQQIFQAAFPQKEVQVKKDLFGQPRMVI 275


>gi|33595094|ref|NP_882737.1| heme biosynthesis protein [Bordetella parapertussis 12822]
 gi|33565171|emb|CAE35967.1| heme biosynthesis protein [Bordetella parapertussis]
          Length = 270

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 9/219 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  +LG R+F      L+ D   PRP+TELLV++AL +    ++ R   R+L
Sbjct: 54  ARRLAGEPMAYLLGGREFMGHWFALTPDVLIPRPDTELLVETALHW----LQGRVAPRVL 109

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ +++    P  +    D+S  AL +A+ NA   G   R   L  DW+ ++ 
Sbjct: 110 DLGTGSGAIAVSVALGCPQAQVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALP 167

Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D+IVSNPPYI          ++R F+PR +L    DGL+    IA G    L   
Sbjct: 168 AQDRYDLIVSNPPYIAREDAHLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPG 226

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   +E G++Q      +     L  V++ +D  G +R+
Sbjct: 227 GAIWMEHGWDQAEAARALLRQAGLREVHSRRDLAGIERI 265


>gi|149918412|ref|ZP_01906902.1| Modification methylase HemK [Plesiocystis pacifica SIR-1]
 gi|149820712|gb|EDM80122.1| Modification methylase HemK [Plesiocystis pacifica SIR-1]
          Length = 304

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 9/266 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +    S   + +    +LD+ QR      + R L  E +  I G R F+ + L
Sbjct: 35  DAEHLLAQALDCSRMDLYLRHAELLDEAQRAPFRELVRRRLSREPVAYIEGARGFHALDL 94

Query: 66  TLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L+ D     PRPETE LVD  L     R     ++ +LD+GTG+GA+ LA+ K      
Sbjct: 95  ELAVDRRVLIPRPETEHLVDWLLEDL--REPPAPLMDVLDVGTGSGAIALAVAKARYEVT 152

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              VD S  AL++A+ NA  +G+ ER    +++    VE   G +  I +N PYI +   
Sbjct: 153 VTAVDASTDALDVARQNAERHGLGERVRLRRANLLDGVEDPPGGWTAIAANLPYIPAADW 212

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS--RHLNKDGLCSVEIGYNQKVDVVRI 238
             L  EVRDF+PR +L GG DGL   R +   V+  R L   G   +EIG  Q  +V  +
Sbjct: 213 AQLAPEVRDFEPRGALVGGDDGLDLVRRLITQVAERRALAPGGGLYLEIGVGQAAEVEAL 272

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
             +     V +  DY    R++   R
Sbjct: 273 LRAAGFVGVASRDDYAKIPRIVAGYR 298


>gi|308071168|ref|YP_003872773.1| HemK-like protein [Paenibacillus polymyxa E681]
 gi|305860447|gb|ADM72235.1| HemK-like protein [Paenibacillus polymyxa E681]
          Length = 299

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 103/201 (51%), Gaps = 4/201 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E    I+G ++FY     +S     PRPETELLV++ L     R+      + 
Sbjct: 77  IARKAAGEPAQYIIGRQEFYGRPFMVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPQA 135

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G+GA+ + L  E P ++    DIS  AL++A  NA  NG +  F   + D  +  
Sbjct: 136 LDIGAGSGAIAVTLAAERPSWRVAAGDISAAALKVAAHNAAANGAAVEFR--EGDLLAPF 193

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G   D++VSNPPYI +  +  L  EVRD +PR++LDGG DGL  YR + + +       
Sbjct: 194 AGTRVDILVSNPPYIPAADIAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPP 253

Query: 221 GLCSVEIGYNQKVDVVRIFES 241
            L   E+G  Q  DV  + E 
Sbjct: 254 RLIGFELGMGQARDVAGLLEQ 274


>gi|78189388|ref|YP_379726.1| modification methylase HemK [Chlorobium chlorochromatii CaD3]
 gi|78171587|gb|ABB28683.1| Modification methylase HemK [Chlorobium chlorochromatii CaD3]
          Length = 297

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 8/223 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + L+   +  I G + FY     +      PRPETELLV+ AL  S       +V  +LD
Sbjct: 69  QRLQGRPVQYITGEQYFYGAPFFVDERVLIPRPETELLVERALEVSGVSALAGEVA-VLD 127

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+G + + L   +P  + V VD+S  AL++A+ NA  +GV+ R   +Q+D  S    
Sbjct: 128 VGTGSGCIAVTLATLAPNLRIVAVDLSPAALDVARLNAERHGVTNRMTFVQADMTSPYFA 187

Query: 162 ----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  + +I+SNPPYI       L  EVRDF+P ++L     G+  Y+ +       L
Sbjct: 188 QQLPFATYQLIISNPPYIPKAEWATLEREVRDFEPELALTTP-SGMECYQALISAAPTLL 246

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              G  ++E+  +    V  + ES  L  V   KDYGG +R++
Sbjct: 247 ADGGTLALELHADGARAVATMLESAGLQEVALMKDYGGFERII 289


>gi|78778709|ref|YP_396821.1| HemK family modification methylase [Prochlorococcus marinus str.
           MIT 9312]
 gi|78712208|gb|ABB49385.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9312]
          Length = 289

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   ++L +++    PRPETEL+VD  + F++   + R +    +LGTG+GA+ +AL 
Sbjct: 84  WRD---LKLKVTNKVLIPRPETELIVD--IVFNIFGKQSRKLF-FAELGTGSGAISIALA 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
              P   G+  DI   ALEIA +N + +            W++ +E   G  D+ +SNPP
Sbjct: 138 LAYPLCNGIATDIDQDALEIAINNYMNSSKQSNLKFYCGHWWTPLESFKGKLDLAISNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI     + L  EV++F+PRI+L GG DGL H R I       L + G   +E  ++Q  
Sbjct: 198 YIPKDTYEKLPKEVKNFEPRIALLGGEDGLQHIREIIQKAPIFLKEKGWLILENHFDQGE 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
            V ++F   K   +    D  G  R
Sbjct: 258 KVKQLFIKNKFTSIEIVNDLSGIGR 282


>gi|187932826|ref|YP_001884695.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B str. Eklund 17B]
 gi|187720979|gb|ACD22200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B str. Eklund 17B]
          Length = 287

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 23/267 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       +I   +  +D          I +  +   +  IL   +F N+  
Sbjct: 28  DAELLLGKVLNKEKIYLITHREEKIDKTNEEKYMELINKRKEKMPVKYILNECEFMNINF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE+LV+  L      I++ D  +I DL  G+GA+ +AL   +   K +
Sbjct: 88  YVEPGVLIPRADTEILVEEVLK----HIDENDSKKICDLCCGSGAIGIAL---ANLRKNI 140

Query: 126 GVDI--------SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
            VD+            + I KSN     + +R   ++SD  +        +D+IVSNPPY
Sbjct: 141 NVDLIDYYETPEKVTLINIEKSN-----ILDRASFMKSDLLNKSINDAKRYDIIVSNPPY 195

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           IE   ++ L  +V++++P  +L GG DGL  Y+ I +     LNK+G+ + EIGYNQ  D
Sbjct: 196 IEECEINDLMEDVKNYEPHTALSGGKDGLDFYKRIINESINVLNKNGILAFEIGYNQGTD 255

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           V  + E +    V   KD  G DRV++
Sbjct: 256 VKELMEEKNFIEVKIVKDLAGLDRVVI 282


>gi|326318377|ref|YP_004236049.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375213|gb|ADX47482.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 311

 Score =  110 bits (276), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R    E +  + G ++FY + L + +   +PRP+TE LVD AL      ++     R+ 
Sbjct: 70  ARRQAGEPVAYLTGRKEFYGLPLQVDARVLDPRPDTETLVDWALEV----LQPLPAPRVA 125

Query: 103 DLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           DLGTG+GA+ LAL    P  + V  VD S  AL +A++NA    +    D +++ W   +
Sbjct: 126 DLGTGSGAIALALRHGLPGAQVVLAVDASADALAVARANA--QRLHLPVDFVRTSWLDGI 183

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G FD +VSNPPYIE    D   L     +PR +L  G DGL   RTI    +  L   G
Sbjct: 184 SGPFDAVVSNPPYIEE---DDPHLAALVHEPRQALASGPDGLDDIRTIVVQSASRLAPGG 240

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              +E G+NQ   V  +  S     V +  D  G+ R
Sbjct: 241 WLLLEHGWNQAQAVQALLRSAGYAEVQSRADLAGHAR 277


>gi|85709576|ref|ZP_01040641.1| protein chain release factors methylase subunit [Erythrobacter sp.
           NAP1]
 gi|85688286|gb|EAQ28290.1| protein chain release factors methylase subunit [Erythrobacter sp.
           NAP1]
          Length = 274

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 118/234 (50%), Gaps = 14/234 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           + D +     + + R   HE +  I G ++FY     +S     PR ++E L+D+ L  S
Sbjct: 45  MSDAEPEGFASLVERRAAHEPVAHITGTQEFYGREFAVSPHVLIPRGDSETLIDTVLE-S 103

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-VSE 148
            P     +  R+LDLGTG+GA+ +  L E     G+G+D S  ALE+A+SNA   G +  
Sbjct: 104 AP-----NAKRVLDLGTGSGALLITTLLELEGASGLGIDASEPALELARSNAQALGLIGS 158

Query: 149 RFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           R   L+ DW         G FD+IV NPPY+E      L  +VRD++P  +L  G +GL 
Sbjct: 159 RARFLRRDWHEEGWDDDLGTFDLIVCNPPYVEEDAE--LDADVRDYEPASALFAGPEGLD 216

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            YR I   + + L+ +G+  +EIG +Q   V +I  +   F V   KD     R
Sbjct: 217 DYRVIIPQLRKLLSAEGMAVLEIGASQGEAVSKIA-TEHGFCVKILKDLANRPR 269


>gi|153809901|ref|ZP_01962569.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174]
 gi|149834079|gb|EDM89159.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174]
          Length = 300

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 21/245 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+  ++R R   T    +  +H  +  I G   F      +      PR +TE+LV+ A+
Sbjct: 55  DAKTEERYRTLCT----KRAQHIPLQHITGRAYFMGYEFCVDERVLVPRQDTEVLVEEAI 110

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +    R+   +  +ILD+ TG+G + L+LL E P   G GVD+S  AL +AK N    G+
Sbjct: 111 S----RMRNLEKPQILDMCTGSGCILLSLLLELPQALGTGVDVSEGALCVAKENRKRLGL 166

Query: 147 SERFDTLQSDWFSS-----------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            +R + +QSD FS+           +E  +D+++SNPPYI +  ++ L  EVR  DP ++
Sbjct: 167 EQRAELIQSDLFSADYFRKNSGNDHME--YDMLISNPPYIRTEDIEGLMEEVRFHDPVLA 224

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           LDG  +GL  Y  I +    +L   G    EIG +Q +DV  I +      +   KD  G
Sbjct: 225 LDGKENGLYFYEKITEQAGTYLKPGGWLMYEIGCDQGMDVSEIMKKNGFEQIEIKKDLAG 284

Query: 256 NDRVL 260
            DRV+
Sbjct: 285 LDRVV 289


>gi|56476055|ref|YP_157644.1| protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1]
 gi|56312098|emb|CAI06743.1| Protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1]
          Length = 280

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D+   L  V   S+ ++   P++ L+  +     + + R    E +  + G R+F+ 
Sbjct: 22  AVVDARILLRHVLQCSAARLAAYPEARLEAPEWAEFRSLVERREAGEPVAYLTGEREFFG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ ALA        +   R+LDLGTG+GA+ ++L  E P  
Sbjct: 82  HPFIVTPAVLIPRPDTELLVELALA----HFGDKPHTRVLDLGTGSGALAISLALELPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V VD S +AL +A +NA     S  F  +  DWFSS+ +  + +IV+NPPYI +    
Sbjct: 138 DVVAVDRSREALWVAMANAARLRASISF--VLGDWFSSLGDDHYQLIVANPPYIAAADPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL     IA    RHL   G   +E G++Q   V  +   
Sbjct: 196 LDEGDVR-FEPSTALVAGPDGLDDLAAIAAQAPRHLEPGGWLFMEHGFDQAAAVRGLLTD 254

Query: 242 RKLFLVNAFKDYGGNDRV 259
                + ++KD  G +RV
Sbjct: 255 GGFSSIASWKDLAGIERV 272


>gi|166366578|ref|YP_001658851.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166088951|dbj|BAG03659.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 294

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 17/215 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR+F    L +S +   PRPETELL+D         +   D    +DLGTG+GA+ + L 
Sbjct: 89  WRNF---TLKVSPEVLIPRPETELLID----IVGETVRGDDGGIWVDLGTGSGAIAIGLA 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
                 +   +D S  AL IAK N +  G ++R    Q  W++ +E   G    ++SNPP
Sbjct: 142 SILTKAEIYAIDYSQTALAIAKENIINTGFADRIILKQGSWWTPLEKWQGQISGMLSNPP 201

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S  +  L +EVR+ +PR++LDGG DGL+  R +      +L   GL  VE+   Q  
Sbjct: 202 YIPSAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGE 261

Query: 234 DVVRIFES----RKLFLVNAFKDYGGNDRVLLFCR 264
            V ++ E+    R++ ++N   D  G DR +L  R
Sbjct: 262 KVAQMLENQGNYRQIQIIN---DLAGFDRFVLAER 293


>gi|145220120|ref|YP_001130829.1| HemK family modification methylase [Prosthecochloris vibrioformis
           DSM 265]
 gi|145206284|gb|ABP37327.1| modification methylase, HemK family [Chlorobium phaeovibrioides DSM
           265]
          Length = 294

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 11/223 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + L+   +  I G + FY ++  +      PRPETELLV+ AL F    +E     R++D
Sbjct: 71  QRLEGRPVQYIAGEQFFYGLQFHVDERVLIPRPETELLVEHALGF----LENTQSARVMD 126

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           +GTG+G + + +   +       +D S +AL +A+ NA+ + V +R    ++D F     
Sbjct: 127 IGTGSGCIAVTMALRNASLVLDALDCSVEALAVARGNALAHKVQDRVRFHEADIFRDSFT 186

Query: 161 ---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                G + +IVSNPPYI     + L  EVR+++PR++L     G+  YR IA      L
Sbjct: 187 APFSAGTYSLIVSNPPYIPDAEWELLQREVREYEPRLALTTPT-GMECYRAIAGHAGELL 245

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +G+   E+       V  I +S     +   KDY G DR++
Sbjct: 246 KPEGVLCFEVHAEGAAAVGAIMDSSGFSAITVTKDYSGLDRIV 288


>gi|170078207|ref|YP_001734845.1| methyltransferase, methylase of peptide chain release factors
           [Synechococcus sp. PCC 7002]
 gi|169885876|gb|ACA99589.1| methyltransferase, methylase of peptide chain release factors
           [Synechococcus sp. PCC 7002]
          Length = 291

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 103/208 (49%), Gaps = 15/208 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114
           WR+F    L +S     PRPETE L+D A A        RD+     +DLGTG+GA+ L 
Sbjct: 86  WRNF---ELVVSPAVLIPRPETEYLIDLAQA------SHRDLHAGHWIDLGTGSGAIALG 136

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L    P  K   VD S  ALE+A+ NA+  G  +R      +W+  ++   G    +VSN
Sbjct: 137 LADSFPNGKIHAVDQSAAALEVARKNAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSN 196

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + ++  L  EV   +P  +LDGG+DGL+  R + +    +L   G+  VE+   Q
Sbjct: 197 PPYIPAALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPDYLISGGIWLVELMRGQ 256

Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR 258
              V ++      +  +    D+ G DR
Sbjct: 257 GETVAQLLADNGHYTQIQIIHDFAGGDR 284


>gi|88807795|ref|ZP_01123306.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805]
 gi|88787834|gb|EAR18990.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805]
          Length = 299

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 112/228 (49%), Gaps = 15/228 (6%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--- 100
           +H  +  ++G   WRD   V L +S+    PR ETELL+D  LA    +    D +    
Sbjct: 73  EHVPLQHLVGRCPWRD---VELQVSAAALIPRQETELLID--LALQCLKHSDSDALPQAG 127

Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
              DLGTG+GA+ +AL +  P ++G  VD+S +AL++A+ N  +   S  +   Q  W+ 
Sbjct: 128 FWADLGTGSGAIAVALARSLPRWEGHAVDLSAEALDLARVNLRSLAPSNGWTLHQGSWWE 187

Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +    G+  +++SNPPYI    +  L   VRD +P ++L GG DGL   R I D   R 
Sbjct: 188 PLRHLWGMLHLVLSNPPYIPRTQLHGLDPVVRDHEPHLALSGGDDGLDCLRAIIDKAPRA 247

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G   VE  ++Q  DV+ +     L    A  D  G  R  L  R
Sbjct: 248 LAPGGWLLVEHHHDQSDDVLMLMRDAGLDAPQARPDLQGVMRFALAQR 295


>gi|171057270|ref|YP_001789619.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leptothrix cholodnii SP-6]
 gi|170774715|gb|ACB32854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leptothrix cholodnii SP-6]
          Length = 280

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 16/259 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V GLS   ++ + D VL   Q       + R L  E +  + G  +F+ + L
Sbjct: 24  DAQLLLGHVCGLSRTGLLTNDDQVLPAAQLARWQQLLARRLAGEPVAYLTGRHEFHGLTL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++SD  +PRP+TE LVD  L   L R+ +    R+LDLGTG+GA+ LA+    P  +  
Sbjct: 84  HITSDVLDPRPDTETLVDWGLEL-LARLGR--PARVLDLGTGSGAIALAIKHRCPSAQVS 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD S  AL +A++N     ++   D    +WF ++ G  FD+I+SNPPYI     D   
Sbjct: 141 AVDFSAAALAVARANGAR--LNLDVDWQPGNWFENLAGQRFDLILSNPPYIAE---DDPH 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241
           +     +PR +L  G DGL   R++     +HL   G   +E G++Q V V  +  S   
Sbjct: 196 MPALRHEPRQALVSGADGLDDIRSLVRQAPQHLVAGGWLLLEHGHDQGVAVQDLLRSTGY 255

Query: 242 ----RKLFLVNAFKDYGGN 256
               R+L L +  +  GG 
Sbjct: 256 REVDRRLDLADHVRCSGGQ 274


>gi|88810846|ref|ZP_01126103.1| HemK protein [Nitrococcus mobilis Nb-231]
 gi|88792476|gb|EAR23586.1| HemK protein [Nitrococcus mobilis Nb-231]
          Length = 283

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 7/219 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R      +  + G R+F+++ L ++  T  PRPETE LV+ ALA SL  I +  V   
Sbjct: 64  VARRASGYPVAYLTGIREFWSLELRVTPATLIPRPETEGLVEVALA-SLTGITQPMV--- 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GAV LA+  E P    V VD   +AL +A+ NA   G+ +R   L  DW    
Sbjct: 120 LDLGTGSGAVGLAIATERPDATVVAVDTCPRALAVARCNARRLGL-QRVQFLLGDWLEPA 178

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  F +IV+NPPY++    +     +R F+P  +L     GL+  R I  G   +L+  
Sbjct: 179 GERRFHLIVANPPYVDPAEPELRCASLR-FEPPTALLAPEQGLAELRRIVSGALTNLHHG 237

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G+ +VE GY Q   V  +F++     ++   D  G+ RV
Sbjct: 238 GVLAVEHGYRQGAAVRTLFQTAGFEEIHTELDLQGHPRV 276


>gi|332290277|ref|YP_004421129.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330433173|gb|AEC18232.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 293

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 138/259 (53%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+++ LC VT  S  Q++   ++ L + Q+  L   + R L+ E I  ILG + F+++ L
Sbjct: 31  DANALLCFVTEKSKAQIMAFAETRLSEAQQQRLELLLQRRLQGEPIAYILGEKGFWSLDL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPF 121
            +S  T  PR +TE LV++AL+  L        + ILDLGTGTGA+ LAL     ++   
Sbjct: 91  LVSPVTLIPRSDTECLVETALSL-LQHYSNEAALSILDLGTGTGAIALALAAELTQQKRD 149

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
           ++ +GVD   +++ +AK N   N ++   + +QSDWFSS+    FD+IVSNPPYI     
Sbjct: 150 YRIIGVDRVAESVLLAKQNEQRNHLT-NVEFMQSDWFSSLPPQKFDLIVSNPPYIAENDP 208

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    +GL+    I +  +  +   G   +E G+ Q   V  +F+
Sbjct: 209 HLKQGDVR-FEPLSALVAKKEGLADIERIIEQATTFMKTGGYLLIEHGWQQAEAVQALFK 267

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                 V    DYGGN RV
Sbjct: 268 RYNWCAVRTVLDYGGNQRV 286


>gi|194290878|ref|YP_002006785.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Cupriavidus taiwanensis LMG 19424]
 gi|193224713|emb|CAQ70724.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Cupriavidus taiwanensis LMG 19424]
          Length = 298

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  VTGLS  Q+I     VL   QR  L   + R L  E +  ++G R+F+  + 
Sbjct: 32  EARMLLTHVTGLSRTQLITRDTDVLTIAQRDALATLLARRLAGEPMAYLIGEREFFGRKF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TE+  ++ALA   P         +LDLGTG+G + + L +E    +  
Sbjct: 92  RVTPDVLIPRPDTEVAAEAALARLAPVPHP----NVLDLGTGSGILAVTLARERRDARVW 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
             DIS  AL +A+ NA   G +E  + L SDW+S++     F +IVSNPPYI +      
Sbjct: 148 ATDISPGALMVAQDNARALG-AEHIEFLVSDWYSALPPDLRFHLIVSNPPYIAAGDPHLA 206

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGLS  R I  G    L   G   +E GY+Q     ++ E+  
Sbjct: 207 EGDLR-FEPIDALTDHDDGLSDLRAIVSGAGMRLLPGGWLLMEHGYDQAAATRQLLEASG 265

Query: 244 LFLVNAFKDYGGNDR 258
              V   +D  G +R
Sbjct: 266 FADVFTARDLAGLER 280


>gi|297588766|ref|ZP_06947409.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC
           53516]
 gi|297574139|gb|EFH92860.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC
           53516]
          Length = 263

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 134/249 (53%), Gaps = 16/249 (6%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFYNVRLTLSSDTFEPRP 76
           S  +I   D + DD ++  L     + L  E I    ILG++ FYN +     +   PR 
Sbjct: 28  SDSIIHSNDEISDDDEKTILE---YKKLYDEDIPIEYILGFKYFYNRKFYTDPNVLIPRF 84

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +TE+LVD  +  +     K D +  + +G+G  ++ L L  +S   K +GVDI+ KA+E+
Sbjct: 85  DTEILVDEIIKTN----RKFDNILEIGIGSGIISITLNLELDS---KVLGVDINEKAIEL 137

Query: 137 AKSNAVT-NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +K NA + N  +  F  + SD + +V   +D+IVSNPPYI+    + L  ++   +PR +
Sbjct: 138 SKKNAESLNATNVEF--VYSDLYENVNSKYDLIVSNPPYIDKKDFNSLETKILK-EPRSA 194

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG DGL  YR I +  S +LN+DG+ + EIGYNQ+  +  I +          KD+ G
Sbjct: 195 LFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIFEILDENGFKNHYCIKDFNG 254

Query: 256 NDRVLLFCR 264
            DRV++  R
Sbjct: 255 FDRVIIARR 263


>gi|116075869|ref|ZP_01473128.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916]
 gi|116067184|gb|EAU72939.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916]
          Length = 299

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 108/204 (52%), Gaps = 8/204 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114
           WRD     L +S D   PR ETELLVD A+A  L  P  +        DLGTG+GAV +A
Sbjct: 87  WRDL---ELWVSPDALIPRQETELLVDLAVARGLQSPSPQWGRGRIWADLGTGSGAVAVA 143

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L ++   ++G  VD S  AL +A+ N  +      +   Q  W+  +    G  D++VSN
Sbjct: 144 LARQLSGWQGHAVDCSAAALALARRNLESWADGMAWQLHQGSWWQPLRPWWGQLDLVVSN 203

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + +VD L   VRD +PR++LDGG+DGL   R + DG +  L   G   +E  ++Q
Sbjct: 204 PPYIPAGVVDQLDPVVRDHEPRLALDGGLDGLDCCRLLLDGAAEALAPGGWLLLEHHHDQ 263

Query: 232 KVDVVRIFESRKLFLVNAFKDYGG 255
              V+ +  +  L  V A +D  G
Sbjct: 264 SEAVLALMTNAGLRDVQAAQDLEG 287


>gi|89897679|ref|YP_521166.1| hypothetical protein DSY4933 [Desulfitobacterium hafniense Y51]
 gi|89337127|dbj|BAE86722.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 285

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 12/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   Q+ ++ +  L   Q       I R  + E +  I+  ++F  +  
Sbjct: 25  DADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            +      PR +TE+LV+  L        S  R    +   I DL TG+GA+ +++    
Sbjct: 85  YVDERVLIPRADTEILVEKVLELKKEWQHSADRAGGGESPHIADLCTGSGALAISIAHFW 144

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  + VG D+S  AL++A+ N    GV  R    Q D+   + G  +D+IVSNPPY+   
Sbjct: 145 PQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPYVTQA 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  E+   +PR++  GG DGL  YR +A      L + G+  VEIG+ Q   V  +
Sbjct: 203 EYGELAPELAK-EPRMAFLGGADGLDFYRELAREARSLLREKGIILVEIGWQQGNSVAEL 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+ +  F     +D GG DRV +F R
Sbjct: 262 FQQQG-FQTQIVQDLGGRDRV-VFAR 285


>gi|307297958|ref|ZP_07577762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916044|gb|EFN46427.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 277

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 12/198 (6%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V  L+   +I+D +  ++ +       A+ R ++ E I  +LG+R+F+ +RL ++     
Sbjct: 33  VLSLNEADLILDGEKEIESKLSAKYMKAVERVVEGEPIDYVLGFREFFGIRLEVTRSVLI 92

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR ETE LV+  +       E+++     D+GTG+GA+  AL +  P       DIS  A
Sbjct: 93  PRNETEELVEIVID------EEKNSKVFADIGTGSGAIACALARNIPSSLVFATDISRDA 146

Query: 134 LEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCLGLEVRD 189
           L +A+ NA TNG+ + RF  ++ D  S +    D   VIVSNPPY+ +  +D L + VR 
Sbjct: 147 LMLAEKNARTNGIFNIRF--IEGDNISGLNDFLDSVEVIVSNPPYVRTGDLDSLDINVRK 204

Query: 190 FDPRISLDGGIDGLSHYR 207
           ++P ++LDGG DGL  YR
Sbjct: 205 YEPMVALDGGKDGLDFYR 222


>gi|127513839|ref|YP_001095036.1| HemK family modification methylase [Shewanella loihica PV-4]
 gi|126639134|gb|ABO24777.1| modification methylase, HemK family [Shewanella loihica PV-4]
          Length = 280

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +       +   PD  L   Q       + R      I  I+G R+F+++  
Sbjct: 26  DAEVMLLHIIHKQRSYLYTWPDERLTSEQVTEYKQMVGRRELGTPIAHIVGEREFWSLPF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++  T  PRP+TE+LV++AL  +LP  E     ++LDLGTGTGA+ L+L  E   ++  
Sbjct: 86  MVNPTTLIPRPDTEILVETAL--NLPLAEN---AKVLDLGTGTGAIALSLAFERSNWQIT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD   +A+ +AK+N   N    + + LQSDWF ++    F++IVSNPPYI+        
Sbjct: 141 AVDKVLEAVALAKANR-DNLKLPQVEVLQSDWFDAINRYDFNLIVSNPPYIDEEDEHLSQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G  G +    IA+    +L   G   +E G+ Q + V         
Sbjct: 200 GDVR-FEPHSALTAGEHGYADLFYIAEAARDYLAPGGYLLLEHGFGQALTVRDKMIELGY 258

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +D+G NDR  L
Sbjct: 259 EAVATVRDFGSNDRCTL 275


>gi|17227611|ref|NP_484159.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120]
 gi|17135093|dbj|BAB77639.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120]
          Length = 304

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 103/194 (53%), Gaps = 14/194 (7%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-----SLPRIEKRDVVR 100
           L  + I  +  WR F   +LT+SS    PRPETE L+D A+A      S   +++   V 
Sbjct: 82  LPVQYIAGVTPWRKF---KLTVSSAVLIPRPETECLIDLAVAAVANSESAMHLQQGHWV- 137

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
             DLGTG+GA+ L L    P      VD S +AL IA+ NA   G+ +R    Q  W+  
Sbjct: 138 --DLGTGSGAIALGLADAFPEATIHAVDCSVEALAIAQQNAWNAGLFDRMRFYQGRWWEP 195

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            S ++G F+ +VSNPPYI S IV  L  EV + +P ++LDGG DGL   R + +    +L
Sbjct: 196 LSLLKGQFNGMVSNPPYIPSDIVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYL 255

Query: 218 NKDGLCSVEIGYNQ 231
              G+  +E+   Q
Sbjct: 256 RPGGIWLIEMMAGQ 269


>gi|308233417|ref|ZP_07664154.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae DSM 15829]
 gi|328944391|ref|ZP_08241853.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM
           15829]
 gi|327490975|gb|EGF22752.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM
           15829]
          Length = 526

 Score =  110 bits (274), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 121/266 (45%), Gaps = 20/266 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G S  ++ +  D VLD  Q   +   +    + + +  I G   F ++ +    
Sbjct: 34  LLSSVMGFSRVELYLHYDQVLDASQLNAMHQRVEARSQGKPLQYITGEMPFRHIIMQCKP 93

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE+LVD  +A      E     R+L++GTG+G + L+L  E      +  D+
Sbjct: 94  GVLIPRPETEVLVDIGIAALKEAHEYHRQPRVLEIGTGSGCIALSLASEVDSCTVLATDV 153

Query: 130 SCKALEIAKSNAVTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           S  ALE+A+ N     +  R      ++      S  G FD+++SNPPY+ +  V  L  
Sbjct: 154 SQDALELAQRNCQALHLEHRVTFVSCSIAQGVNPSYYGQFDLLISNPPYVPTSAVKTLPA 213

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI---------------GYN 230
           EV  F+P ++LDGG DGL  ++ I +     L   G+  VE+               G  
Sbjct: 214 EVALFEPHLALDGGKDGLDIFQKILETAPHMLRPGGMLCVELFEDNVDKAQALCVASGVW 273

Query: 231 QKVDVVRIFESRKLFLVNAFK-DYGG 255
           QKV + R    RK FLV   K D+G 
Sbjct: 274 QKVYIERDLTHRKRFLVARLKGDFGA 299


>gi|189347186|ref|YP_001943715.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium limicola DSM 245]
 gi|189341333|gb|ACD90736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium limicola DSM 245]
          Length = 296

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 108/221 (48%), Gaps = 8/221 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L    +  I+G + FY     +      PRPETELLV+ A  F   R       R+LD+G
Sbjct: 73  LDGRPVQYIIGEQFFYGKPFVVDERVLIPRPETELLVEHAAEFLTTRKPVNPECRLLDIG 132

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SS 160
           TG+G + + L    P+ +   +D S  AL++A+ NA   GV +R    Q+D F     S 
Sbjct: 133 TGSGCIAVTLAGLFPYLEVTALDRSEDALDVARGNARKQGVLDRILFFQADMFDPDLVSR 192

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FDVIVSNPPYI     D L  EVR F+P+ +L    DG   Y  I    +  L   
Sbjct: 193 FSSPFDVIVSNPPYIPECEWDGLQKEVRGFEPKDALITP-DGSDAYLAICRTAALILKPG 251

Query: 221 GLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260
           G   +EI + +  ++VR I  S     ++  KDY G DR++
Sbjct: 252 GALCLEI-HAEGAEMVRSIMASEHFGSISVLKDYSGFDRIV 291


>gi|170730036|ref|YP_001775469.1| protoporphyrinogen oxidase [Xylella fastidiosa M12]
 gi|167964829|gb|ACA11839.1| protoporphyrinogen oxidase [Xylella fastidiosa M12]
          Length = 275

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 13/210 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R F+ + + +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ L
Sbjct: 67  LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEG-LFDVIV 169
           A+  E P  + +  D S  AL+IA  NA  +    R + +   + +W+ ++ G  FD+IV
Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAH----RLNHVVFREGNWYEALLGERFDLIV 178

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI    +     ++R F+P  +L  G DGL   R +A G   HL   G   +E G+
Sbjct: 179 SNPPYIAVTDLHLTQGDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGW 237

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           +Q   +  +  +  L  V   +D    DRV
Sbjct: 238 DQGAAMRTLLHTAGLVAVATVQDLEARDRV 267


>gi|77460968|ref|YP_350475.1| modification methylase HemK [Pseudomonas fluorescens Pf0-1]
 gi|77384971|gb|ABA76484.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudomonas fluorescens Pf0-1]
          Length = 276

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 122/237 (51%), Gaps = 8/237 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PERIVPSEAALVFAEYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L             ++LDLGTG+GA+ LAL  E P +K   VD   +A+ +A+ N     
Sbjct: 102 LELL-----PATPAKVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVALAERNRQRLH 156

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++     L S WFS++EG  F++I+SNPPYI +     +  +VR F+P  +L  GIDGL 
Sbjct: 157 LNN-ATVLSSHWFSALEGKRFELIISNPPYIRAADPHLMEGDVR-FEPESALVAGIDGLD 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R I      HL   G   +E GY+Q   V  +  ++    V++  D GG+ R+ L
Sbjct: 215 DLRLIIAQAPAHLEAGGWLMLEHGYDQAEAVRDLLLTQGFDEVHSRTDLGGHQRISL 271


>gi|332800046|ref|YP_004461545.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Tepidanaerobacter sp. Re1]
 gi|332697781|gb|AEE92238.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Tepidanaerobacter sp. Re1]
          Length = 285

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 125/264 (47%), Gaps = 11/264 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  V G    +++V  +  +  +Q     + +    +   I  I+G ++FY +  
Sbjct: 25  DSELILGYVLGKDRLKLLVYDEMSITKQQLECFNDLLALRCQSTPIAYIIGRKEFYGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE LV+  L      I   +   I DL  G+GA+ +A+   +   +  
Sbjct: 85  YIKPGVLIPRPETEFLVEETLNV----IYSIENPLIADLCCGSGAISVAVAVNNNRVRVY 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
             DIS  A E+A +N   +GV +R   +Q D +   E      FDV+VSNPPYI    + 
Sbjct: 141 ASDISDVACEVASTNIKLHGVQDRVSLMQGDLWMPFEEKNIRGFDVVVSNPPYIPKEELS 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V++ +P+I+L+GG  GL  YR I       L   G    EIG+NQ  DV  + + 
Sbjct: 201 TLPDDVKN-EPQIALNGGTGGLEFYRRIVLRAPEFLKIGGRIIFEIGWNQARDVEIMLKE 259

Query: 242 RKLFLVNAFKDYGGNDRVL--LFC 263
                +   KDY G DRV+  +FC
Sbjct: 260 TGFQDIKIIKDYAGFDRVISGVFC 283


>gi|298243250|ref|ZP_06967057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ktedonobacter racemifer DSM 44963]
 gi|297556304|gb|EFH90168.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ktedonobacter racemifer DSM 44963]
          Length = 299

 Score =  110 bits (274), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  +    +   P+  L   Q       I R  ++E +  ++G ++FY    
Sbjct: 30  DAQVLLGHILQVPRATLYAYPERELSVEQEKRFRELIERRARNEPVAYLVGEKEFYGRDF 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +    PRPETELLV++AL  +  R++  ++  + D+GTG+G + + L  E P    +
Sbjct: 90  QVDARVLIPRPETELLVEAALKEARRRLDAGEMPVVADVGTGSGVIPITLALEEPRLPVI 149

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S +ALE+A++N    GV ER   LQS    ++    D++++N PY+ +  +  + 
Sbjct: 150 YACDVSAEALEVARTNCQRYGVEERVILLQSYLLQALPQPVDMLLANLPYVGTDELPQMA 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFESR 242
            +V +++P ++L  G DGL     +     ++  L   G C +E+GY  +  + R+ +S 
Sbjct: 210 PDVWNYEPHLALFSGPDGLGLLTRLCREARQYGMLRPGGWCVLEMGYLHQEPLTRLVKS- 268

Query: 243 KLFL---VNAFKDYGGNDRVLL 261
            L+    V    DY G DR L+
Sbjct: 269 -LWPKADVACISDYAGLDRHLV 289


>gi|56752240|ref|YP_172941.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301]
 gi|56687199|dbj|BAD80421.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301]
          Length = 293

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 102/206 (49%), Gaps = 8/206 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +S     PRPETEL++D A+A+S      R      DLGTG+GA+ +AL 
Sbjct: 84  WRDL---ELQVSPAVLIPRPETELIIDLAIAWSQAE-PARQTGFWADLGTGSGAIAIALA 139

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPP 173
           +  P    + VD S +AL IA++NA   G+S+R    Q  W    +   G    I+SNPP
Sbjct: 140 RALPQITVLAVDDSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPP 199

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI +     L  EVRD +PR +L+ G DGL   R +A     +L   GL   E    Q  
Sbjct: 200 YIPTQEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQST 259

Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDR 258
            V  +  +   +  + + +D  G DR
Sbjct: 260 AVTALLAAIPGYSEIQSHRDLAGRDR 285


>gi|227431145|ref|ZP_03913201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|227353097|gb|EEJ43267.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
          Length = 330

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 6/217 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +K++    ILG   FY     +      PRPETE LV+  L  +      +  V +LD+G
Sbjct: 114 VKNKPPQYILGHAPFYGREFMVDERVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIG 170

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164
           TG+GA+   L+ E+   KG   DIS  AL +A+ NA    +S     ++SD FS++ GL 
Sbjct: 171 TGSGAIIETLMLENDRVKGFAADISQDALTVAEMNAQRFNLS-HLHFVESDVFSALSGLK 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+IVSNPPYI +   + +   V  F+P  +L    DGL+ Y  IA G+  HL + G   
Sbjct: 230 FDLIVSNPPYISNSDENEMDDSVLTFEPHTALFAENDGLAIYEKIARGLDAHLTEYGRAY 289

Query: 225 VEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
            EIGY Q   V ++ ++      +   +D+ G DR++
Sbjct: 290 FEIGYKQGKAVQQLLQAALPKAKITLRQDFSGLDRMI 326


>gi|255534978|ref|YP_003095349.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341174|gb|ACU07287.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium
           3519-10]
          Length = 285

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 133/260 (51%), Gaps = 17/260 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLS 68
           F+ R+ G          +   D+ Q   LT  I++ LK      +ILG  +FY +   ++
Sbjct: 32  FVHRILGYDRFAQRKFSNETQDENQLQKLT-EILKQLKTGMPFQQILGETEFYGLNFFVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE L++ A+A       K   ++ILD+GTG+G + + L K  P  +   +D
Sbjct: 91  ENVLIPRPETEELLELAIAEITKLTVKNQSLKILDIGTGSGIIPVVLKKHFPAAELSAID 150

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            S KALE+A+ NA  + V+  F  +  D+    + G+FD+I+SNPPYI     D +   V
Sbjct: 151 YSEKALEVARKNADFHQVNINF--IHQDYLGGELNGIFDIIISNPPYIGRDENDEISDSV 208

Query: 188 RDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           ++F+P ++L    +  L  Y  IA+    HL+  G+  +EI  NQK+      E+R LF 
Sbjct: 209 KNFEPLMALFAPAENPLIFYEKIANDCKTHLSDGGMLFLEI--NQKLGS----ETRDLFT 262

Query: 247 -----VNAFKDYGGNDRVLL 261
                V   KD  GNDR ++
Sbjct: 263 EVLHEVRLVKDLSGNDRFVV 282


>gi|114798227|ref|YP_759358.1| HemK family methyltransferase [Hyphomonas neptunium ATCC 15444]
 gi|114738401|gb|ABI76526.1| methyltransferase, HemK family [Hyphomonas neptunium ATCC 15444]
          Length = 285

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 7/220 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R    E I  ILG   FY + +   +    PR ++E +V++AL     R+ K   + 
Sbjct: 63  AVERRAAREPIQHILGVTQFYGLDIRTDARALIPRIDSECVVEAAL----DRMPKNTPLV 118

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLGTG+G +  ALL + P  +G GV+ S +A  +A+ N     ++ R       W + 
Sbjct: 119 LADLGTGSGCLLAALLSQRPLARGEGVEASAEAASLARENLDALNLAARGAVFDGSW-TQ 177

Query: 161 VEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +G    D+I+SNPPYI S  +  L  EVR  DP  +LDGG DGL  YR I    +  + 
Sbjct: 178 WQGWENADLIISNPPYIASAEIAVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMK 237

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                  EIG++QK  +  +        + + +D GGNDR
Sbjct: 238 PGAWLVFEIGHDQKAALEWLMAQTGFEAIASGQDLGGNDR 277


>gi|182415308|ref|YP_001820374.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutus terrae PB90-1]
 gi|177842522|gb|ACB76774.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutus terrae PB90-1]
          Length = 284

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 6/226 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  +LG  +F+ ++L        PRPETE LV+  +A      +     RI
Sbjct: 62  VRRRGQREPLQYVLGETEFFGLKLKTDRRALIPRPETERLVELVVARY---ADTAPPARI 118

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ LAL       +  G+D S  AL +A  NA   G+  R   LQSDW++ +
Sbjct: 119 LDLGTGSGAIALALASRFTDAQVTGLDHSEDALALAAENAAATGLPSRVTWLQSDWYAGL 178

Query: 162 E--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218
                F++IV+NPPY+ +        EVR+ +P ++L  GG DGL+  R I  G ++ L 
Sbjct: 179 PDGAAFELIVANPPYLSAEETAQTQPEVREHEPHLALTSGGPDGLADLRKILAGATQFLA 238

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             GL ++E G  Q   +  +        V +  D  G DR ++  R
Sbjct: 239 AGGLIALETGIAQHPALCALAREAGFNQVESLPDLTGRDRYVIAHR 284


>gi|257064122|ref|YP_003143794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Slackia heliotrinireducens DSM 20476]
 gi|256791775|gb|ACV22445.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Slackia heliotrinireducens DSM 20476]
          Length = 314

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 132/289 (45%), Gaps = 41/289 (14%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +   TGLS  ++  + +  L   +R  L +A+ R    E +  I G   F  + + 
Sbjct: 30  AQWLMSHATGLSRVEIYTNYERPLSTEERDVLRDALRRRGSGEPLQYIQGSAPFRFIEVK 89

Query: 67  LSSDTFEPRPETELLVDSAL-------------------------------AFSLPRIEK 95
           +      PRPETE+LVD A+                               AF +P    
Sbjct: 90  VRPGVLIPRPETEVLVDEAMRELKSIMPDAFTHRTARDSMSVDGEEPVPAEAFKIP---- 145

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D  TG+G +  A+  E    + V  D+S  A+E+A+ NA   G+ +R +    
Sbjct: 146 --TFNVVDACTGSGCIACAIASEHANAQVVATDVSETAVELARENAADLGLGDRIEVRLC 203

Query: 156 DWFSSVEGLF-DVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGIDGLSHYRT-IADG 212
           D  +  E  + D+IVSNPPY+ + +VD  +  EV DF+PR++LDGG DGL  YR  +ADG
Sbjct: 204 DLLADAEDSWADLIVSNPPYVPTAVVDSEIPAEVADFEPRLALDGGEDGLDIYRRLLADG 263

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R L  DG+ + E+      +  R+ E      V   KD  G  R+++
Sbjct: 264 -KRVLKADGILACELHETCLEEAARLAEEAHYTQVRIAKDLAGRPRIIV 311


>gi|254443578|ref|ZP_05057054.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235]
 gi|198257886|gb|EDY82194.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235]
          Length = 286

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 5/255 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +    G+   ++ +  D  L + +   + + + R  K E +  I+G   F+ + L
Sbjct: 29  NAEWLIASALGIDRMKLYMQFDRPLKEAELADMRSMVARRAKREPLQYIIGSAPFHELDL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +    PRPETE LV+  L  SL   E     RI+DLGTG+GA+ LAL    P  +  
Sbjct: 89  KVDARALIPRPETEQLVELVLG-SLG--ENDAPYRIIDLGTGSGAIALALAFALPRAEIF 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
            VD S +ALE+A+ NA+  G+  R + + SDWFS    EG FD+IVSNPPY+    ++  
Sbjct: 146 AVDASREALELAQENALRCGLQNRVNFVLSDWFSDFDPEGEFDLIVSNPPYLTQEELESA 205

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR+ +P  +L    +GLS   TI  G    L   G+  +E G   + +++ + E+  
Sbjct: 206 EPEVREHEPVGALVADREGLSDLETILQGAFGRLKPGGMLWLETGIGHRAELLALCENAG 265

Query: 244 LFLVNAFKDYGGNDR 258
                   D+ G  R
Sbjct: 266 YAESLGIDDWSGRAR 280


>gi|73542730|ref|YP_297250.1| modification methylase HemK [Ralstonia eutropha JMP134]
 gi|72120143|gb|AAZ62406.1| Modification methylase HemK [Ralstonia eutropha JMP134]
          Length = 289

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  VTGL+  Q+I      L   QR      + R L  E +  ++G R+F+  + 
Sbjct: 31  EARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLIGEREFFGRKF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TE+  +S+LA    R+      R+LDLGTG+G + + + +E    +  
Sbjct: 91  RVTPDVLIPRPDTEIAAESSLA----RLAGVPHPRVLDLGTGSGILAVTIARERTDAEVW 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
             DIS  AL +A+ NA   G + R   L SDW++++  E  F +IVSNPPYI       +
Sbjct: 147 ATDISPGALMVAQDNASALG-ANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHLI 205

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGLS    I  G    L   G   +E GY+Q      + E   
Sbjct: 206 EGDLR-FEPIDALTDHKDGLSDLAAIVAGAHGRLLPGGWLLMEHGYDQAEATQGLLERAG 264

Query: 244 LFLVNAFKDYGGNDR 258
              V   +D  G  R
Sbjct: 265 FTEVFTARDLAGQQR 279


>gi|15838113|ref|NP_298801.1| protoporphyrinogen oxidase [Xylella fastidiosa 9a5c]
 gi|18203344|sp|Q9PD67|HEMK_XYLFA RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.XfaHemK2P
 gi|9106546|gb|AAF84321.1|AE003981_3 protoporphyrinogen oxidase [Xylella fastidiosa 9a5c]
          Length = 275

 Score =  109 bits (273), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R F+ + + +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ L
Sbjct: 67  LIGRRGFWTLDVMVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
           A+  E P  + +  D S  AL+IA  NA  +G++      + DW+ ++ G  FD+IVSNP
Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAHGLNHVV-FREGDWYEALLGERFDLIVSNP 181

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI          ++R F+P  +L  G DGL   R +  G   +L   G   +E G++Q 
Sbjct: 182 PYIAVTDPHLTQGDLR-FEPPSALISGGDGLDALRILTAGAPAYLRPGGWLVMEHGWDQG 240

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             +  +  +  L  V   +D    DRV
Sbjct: 241 AAMRTLLHTAGLVAVATVQDLEARDRV 267


>gi|293399751|ref|ZP_06643897.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306151|gb|EFE47394.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 286

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 21/262 (8%)

Query: 10  FLCRVTGLSSHQVIVDPDS--VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           +L  +T + +H + ++ +    +D  ++F     + R +K E +  +LG+  FY  R  +
Sbjct: 28  YLLELTNMEAHNLYMEYEQEVPVDIAEQF--EQGLCRLIKGEPLGHVLGFEWFYGYRFKV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PRPETE LV + LA +   +     V + D+GTG+GA+ ++L KE      +  
Sbjct: 86  NEDVLIPRPETEELVANVLA-AYDEVFDGKQVTVADIGTGSGAIAISLKKEEDRLHMLAT 144

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDC 182
           DIS KA+ +AK NA  N  +  F   D LQ     +++   D+++SNPPYI  E  +  C
Sbjct: 145 DISEKAVMVAKENAAANEATVCFMVGDMLQPLIERNIK--LDILISNPPYIPNEEKMETC 202

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
               V D++P ++L GG DGL  YR I +   + LN+    + E+GY+QK  +  +  ++
Sbjct: 203 ----VVDYEPHVALFGGEDGLKFYRIIFENALKVLNEKAFMAFEMGYDQKERLTAL--AK 256

Query: 243 KLF---LVNAFKDYGGNDRVLL 261
           + F    +   +D  G +R+L 
Sbjct: 257 EYFPEAKIEVLQDMSGKNRMLF 278


>gi|83720020|ref|YP_443438.1| hemK protein [Burkholderia thailandensis E264]
 gi|257137780|ref|ZP_05586042.1| hemK protein [Burkholderia thailandensis E264]
 gi|83653845|gb|ABC37908.1| hemK protein [Burkholderia thailandensis E264]
          Length = 285

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 129/264 (48%), Gaps = 19/264 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G S  Q+I   D  LD    +R+    A  R    E + ++ G R+F+ +
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEA--RRAAGEPVAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLG G+GA+ +++    P  +
Sbjct: 82  DFDVTPDVLIPRPETELLVETALDA----IDGIASPCVLDLGAGSGAIAVSIASVRPDAR 137

Query: 124 GVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYI 175
              +D S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI
Sbjct: 138 VWALDRSAAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYI 195

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                     ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V
Sbjct: 196 ARHDPHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAV 254

Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259
             + E+     V +  D    +R 
Sbjct: 255 RALLEAAGFADVESLADLASIERA 278


>gi|254180489|ref|ZP_04887087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1655]
 gi|184211028|gb|EDU08071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1655]
          Length = 285

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 127/262 (48%), Gaps = 15/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P     
Sbjct: 84  DITPDVLIPRPETELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDACVW 139

Query: 126 GVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIES 177
            ++ S  AL++A+ NA         G   RF  L+SDW+++++ GL F V+VSNPPYI  
Sbjct: 140 ALERSVAALDVARRNARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           + ++     V +  D    +R 
Sbjct: 257 LLDAAGFADVESRADLASIERA 278


>gi|309782947|ref|ZP_07677667.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia sp. 5_7_47FAA]
 gi|308918371|gb|EFP64048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia sp. 5_7_47FAA]
          Length = 300

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 11/258 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TELLV+ A    L  +E+ D   +LD+GTG+G + + +       +  
Sbjct: 91  KVTPAVLIPRPDTELLVEQA----LDHLEECDAPAVLDMGTGSGIIAITIALARRDARVW 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180
             D S  AL +A  NA   G +     L  DW+ ++ G      FD+I SNPPYI +   
Sbjct: 147 ATDASTDALAVAIDNAKALGATNVQAAL-GDWYGALAGTEAPPAFDLIASNPPYIAATDA 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGL H R+I  G    L   G   VE GY+Q   V  +  
Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264

Query: 241 SRKLFLVNAFKDYGGNDR 258
                 V   +D  G+DR
Sbjct: 265 GAGFANVFTAQDLAGHDR 282


>gi|302036344|ref|YP_003796666.1| protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira
           defluvii]
 gi|300604408|emb|CBK40740.1| Protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira
           defluvii]
          Length = 309

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 10/231 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +   + R    E +  +LG ++F +    ++S    PRPE+ LLV      ++ R  +  
Sbjct: 70  MQELVARRANREPLQYLLGTQEFCDREFRVTSAVLIPRPESALLVQE----TIRRCRQNP 125

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D+GTG+G + +++    P  + + +D S  AL +A++N    G   R + +Q D 
Sbjct: 126 SAIVVDVGTGSGCLAVSVASALPDARVLAIDASADALAVAQANMEQFGFGARIECVQGDL 185

Query: 158 FSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            + +         DVIVSNPPYI  + +  L  EVR F+P ++L GG DG+  +R +   
Sbjct: 186 LAPLAQRGETSQVDVIVSNPPYIADLDLVTLQPEVRCFEPHLALAGGPDGMDVHRRLLQQ 245

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLF 262
              +L   G+  +E+G  Q   V R  E    F   +  +D GG DRV+ F
Sbjct: 246 APVYLKSRGVLLMEVGLGQAELVCREAEKSGWFRTYDVLRDEGGIDRVVCF 296


>gi|323693925|ref|ZP_08108112.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum
           WAL-14673]
 gi|323502022|gb|EGB17897.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum
           WAL-14673]
          Length = 354

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 129/298 (43%), Gaps = 70/298 (23%)

Query: 32  DRQRFFLTNAIVRSLKHE-----SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +RQR   +  + R    +      I  ILG ++F  +  T+  +   PR +TE LV++ L
Sbjct: 60  NRQRLEKSYPVYRDYLEKRASRIPIQHILGNQEFMGLEFTVDENVLIPRQDTEKLVETVL 119

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS------- 139
                R  K   + +LD+ TG+G + ++L     + K    DIS  AL++AK        
Sbjct: 120 -----RDHKNQALSVLDMCTGSGCIAVSLAVLGGYDKVTAADISKAALKVAKKNVRRHFL 174

Query: 140 --------------------------------------------NAVTNGVS-------E 148
                                                       N  + G++       +
Sbjct: 175 VQKGTARSESTLISDTPWKLKMCTYVYQGGDAQEQETAGESVSDNGYSPGIARIPGVRKK 234

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            F  L+SD F ++E    FD+IVSNPPYI S ++D L  EV+D +PR++LDG  DGL  Y
Sbjct: 235 EFVLLESDLFLNLEQDEKFDIIVSNPPYIPSAVIDGLEPEVKDHEPRMALDGAEDGLYFY 294

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R +A    R+L + G    EIG +Q   V ++  +     +   KD  G DRV+  CR
Sbjct: 295 RILAQQSGRYLKEGGFIYFEIGCDQAEAVGKLLTAAGFGEIETIKDEPGLDRVVRACR 352


>gi|92113654|ref|YP_573582.1| HemK family modification methylase [Chromohalobacter salexigens DSM
           3043]
 gi|91796744|gb|ABE58883.1| [protein release factor]-glutamine N5-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 286

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            RSL H   H + G R+F+ + L +   T  PRP+TE LV++ LA  +P    R     L
Sbjct: 63  ARSLGHPVAH-LTGEREFWGLVLRVDDTTLIPRPDTECLVEALLA-RMPHATGR----AL 116

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL  E P +  VGVD    A+ +A +NA    +S     L SDWFS++ 
Sbjct: 117 DLGTGSGAIALALASERPAWHVVGVDKVPGAVRLATANAERLALSN-ATFLVSDWFSALG 175

Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLN 218
              FDVI +NPPYI          +VR F+PR +L   D G+  L H    A     HL 
Sbjct: 176 NETFDVIAANPPYIAEDDPHLAQGDVR-FEPRSALVAEDAGLADLCHLALTARA---HLA 231

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             G  ++E G  Q   V  I  S     V +  D G  +RV L
Sbjct: 232 GGGWLAMEHGMTQAARVREILTSAGYRDVASVADLGARERVTL 274


>gi|114567902|ref|YP_755056.1| peptide release factor-glutamine N5-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114338837|gb|ABI69685.1| peptide release factor-glutamine N5-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 282

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 12/232 (5%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++RQ++     I R +K E +  I+G ++F ++   L+     PRPETELLV+ AL  + 
Sbjct: 56  EERQQY--REVIKRRIKGEPLAYIVGHKEFMSLEFKLNQAVLIPRPETELLVEEALEIA- 112

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
              E ++ +RI D+GTG+GA+ ++L    P  +    DIS  ALE A+ NA  +GV+  F
Sbjct: 113 ---EGKEGLRICDVGTGSGAIAVSLAFYVPTAQVYATDISADALEKARENATRHGVAITF 169

Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              Q D    +  E  FD+IV+N PYI S     L   V+D++P ++L    DGL  YR 
Sbjct: 170 --YQGDLLFPLLNEEPFDIIVANLPYIGSKEFILLDSGVKDYEPALALLAPGDGLDLYRR 227

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +    +  L  +G   +EIG+ Q      + +          KD  G DR+L
Sbjct: 228 LLPQAAALLAPEGCLLLEIGHEQGSRAREMMQG--WGETEIIKDLAGRDRLL 277


>gi|270291032|ref|ZP_06197255.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|270280428|gb|EFA26263.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
          Length = 285

 Score =  109 bits (272), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD  Q+F     + R++  E +  I    +FY     + S    PR ETE LV+  L  +
Sbjct: 52  LDQWQQF--QKDVQRAVNGEPVQYITNKANFYGREFYVDSRVLIPRVETEELVEHILN-A 108

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            P++ +   +R+LD+GTG+G + + L  E P ++   VDI+ +AL +A+ NA        
Sbjct: 109 HPQLNQS--LRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQNAHQQEAV-- 164

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            D  Q   F +V+G  FD+IVSNPPYI     D +   V +++P  +L    DGL  Y+ 
Sbjct: 165 VDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALFAPDDGLFWYKQ 224

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           I   ++ HL   G    E GY+Q   + + F E   +  V+  +D  G+DR+L
Sbjct: 225 IGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVKDVDVLQDLSGHDRIL 277


>gi|291288201|ref|YP_003505017.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885361|gb|ADD69061.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM
           12809]
          Length = 273

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 127/239 (53%), Gaps = 23/239 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           D+  F    TG+    + V+ +  ++     +Q+    NA       E +  ++  ++FY
Sbjct: 20  DAIEFASHTTGIPYTLISVNLNEHVEITRETKQKLARINA------DEPLAYVIQNKNFY 73

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + + +  +   PRPETE+LVD AL F+     KR+ +R+LD+ TG+G +  AL+   P 
Sbjct: 74  GLDMYVDENVLIPRPETEILVDEALKFA----GKRENLRVLDICTGSGCILTALMSSLPD 129

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI-ES 177
            +G+G+DIS  AL+ AK NA T+G++ER D ++ D     E   G FD++  NPPY+ ES
Sbjct: 130 SEGIGLDISEGALDAAKFNADTHGIAERVDFVKGDALRIKELGLGTFDIVTCNPPYLSES 189

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKV 233
             +  L  +   ++P+ +L  G D +  Y+ + D +    NK+G      + IG  QK+
Sbjct: 190 EWL--LSAKSLKYEPKNALSAGKDDILFYKKLLDMIPYLCNKNGGGAFFELGIGQYQKL 246


>gi|289523199|ref|ZP_06440053.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503742|gb|EFD24906.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 283

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 10/244 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L +S   LC+V G     +I   +  + D +  +L   + R    E +  I     FY
Sbjct: 21  EPLVESDLLLCKVLGCDRSWLIAHKERPIFDYELQYLNALLERRCNKEPLAYIFNEAQFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE LV+ AL+         D    +D GTG+G + ++LL E+P 
Sbjct: 81  GRNFYVGEGVLVPRPETESLVEIALSLV-------DEGIAVDWGTGSGCIVISLLLENPK 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESV 178
            +G+ +D++ KAL  A  N     + +R             S +   D +VSNPPY+ + 
Sbjct: 134 LRGIALDVNPKALYWAWKNVDKYDLFDRLTLWHESGKLPAQSAKSGVDAVVSNPPYVPTN 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +VD L  EV+ F+P ++LDGG DG   YR + +  S  L + G   VE G  ++ +++ +
Sbjct: 194 LVDTLMSEVKCFEPILALDGGNDGTLWYRFLFERASLWLKEGGWLIVETGGWKEKEILSL 253

Query: 239 FESR 242
             +R
Sbjct: 254 APAR 257


>gi|134093471|ref|YP_001098546.1| protein methyltransferase HemK [Herminiimonas arsenicoxydans]
 gi|133737374|emb|CAL60417.1| Protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Herminiimonas arsenicoxydans]
          Length = 276

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 10/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VT LS  Q+I + + VL+  +   L     R +  E +  +LG R+FY +  
Sbjct: 23  EARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRMAGEPMAYLLGEREFYGLSF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PRP+TELLV+     +L R+ ++   R+LD+GTG+GA+ +A+    P     
Sbjct: 83  QVSPAVLIPRPDTELLVE----LALQRLPQQG--RVLDMGTGSGAIAIAIAHARPDAVVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            +D+S  AL +A +NA  +    R + L+SDWF++++G  FD+IVSNPPYI +       
Sbjct: 137 ALDVSEAALAVASANAHRH--KARVECLRSDWFAALDGRQFDLIVSNPPYIVAGDRHLSE 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L    DGLS  R I++  + HL+ DG   +E GY+Q   V  +      
Sbjct: 195 GDLR-FEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHGYDQAAAVRGLLAENGF 253

Query: 245 FLVNAFKDYGGNDRV 259
             V +++D    +RV
Sbjct: 254 GEVQSWRDLAQIERV 268


>gi|71274722|ref|ZP_00651010.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71899597|ref|ZP_00681752.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71164454|gb|EAO14168.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71730639|gb|EAO32715.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 275

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 13/210 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R F+ + + +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ L
Sbjct: 67  LIGRRGFWTLDVIVSSATLIPRAETETLVEQALQ----RLDHASERRVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEG-LFDVIV 169
           A+  E P  + +  D S  AL+IA  NA  +    R + +   + +W+ ++ G  FD+IV
Sbjct: 123 AIACERPQAQVLATDNSAAALDIAARNASAH----RLNHVVFREGNWYEALLGERFDLIV 178

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI          ++R F+P  +L  G DGL   R +A G   HL   G   +E G+
Sbjct: 179 SNPPYIAVTDPHLTQGDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGW 237

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           +Q   +  +  +  L  V   +D    DRV
Sbjct: 238 DQGAAMRTLLHTAGLVAVATVQDLEARDRV 267


>gi|89900073|ref|YP_522544.1| HemK family modification methylase [Rhodoferax ferrireducens T118]
 gi|89344810|gb|ABD69013.1| modification methylase, HemK family [Rhodoferax ferrireducens T118]
          Length = 280

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 107/220 (48%), Gaps = 10/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  I G ++F+ + L + +    PRP+TE LV+ AL   + +        +
Sbjct: 59  VQRRAASEPLAYITGHQEFFGLDLAVDARVLVPRPDTETLVEWAL--DVLQAPTGTAPAV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ LAL    P  +   VD S  AL +A++NA   G++ +F   Q  W + +
Sbjct: 117 LDLGTGSGAIALALKATRPELRVSAVDYSADALAVARANAQRLGLAVQFS--QGAWLAGL 174

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +  FD IVSNPPY   V      L+   F+P  +L  G DGL   R I      HLN
Sbjct: 175 AQPDARFDAIVSNPPY---VAAQDKHLDALTFEPLQALASGADGLDDIRQIITQAPAHLN 231

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             G   +E GY+Q   V  +     L  V + +D  G +R
Sbjct: 232 PGGWLLLEHGYDQAAAVRALLLDAGLHDVQSRRDLSGIER 271


>gi|219670828|ref|YP_002461263.1| modification methylase, HemK family [Desulfitobacterium hafniense
           DCB-2]
 gi|219541088|gb|ACL22827.1| modification methylase, HemK family [Desulfitobacterium hafniense
           DCB-2]
          Length = 285

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 125/266 (46%), Gaps = 12/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   Q+ ++ +  L   Q       I R  + E +  I+  ++F  +  
Sbjct: 25  DADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            +      PR +TE+LV+  L        S  R    +   I DL TG+GA+ +++    
Sbjct: 85  YVDERVLIPRADTEILVEKVLELKKEWQHSADRGGSEESPHIADLCTGSGALAISIAHFW 144

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  + VG D+S  AL++A+ N    GV  R    Q D+   + G  +D+IVSNPPY+   
Sbjct: 145 PQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPYVTQA 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  E+   +PR++  GG DGL  YR +A      L + G+  +EIG+ Q   V  +
Sbjct: 203 EYGELAPELAK-EPRMAFLGGADGLDFYRELAREGRSLLREKGIILMEIGWQQGNSVAEL 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+ +  F     +D GG DRV +F R
Sbjct: 262 FQQQG-FQTQILQDLGGRDRV-VFAR 285


>gi|157412680|ref|YP_001483546.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9215]
 gi|157387255|gb|ABV49960.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9215]
          Length = 289

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 9/205 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   ++L +++    PRPETEL+VD  + F++   +K +     +LGTG+GA+ +AL 
Sbjct: 84  WRD---LKLKVTNKVLIPRPETELIVD--IVFNIFG-KKSNKFLFAELGTGSGAISIALA 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
              P   GV  DI   ALE+A  N   +           +W+S +E   G  D+ +SNPP
Sbjct: 138 LAYPLSHGVATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGKLDLAISNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S   + L  EV++F+P+I+L GG DGL H + I       L + G   +E  ++Q  
Sbjct: 198 YIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILENHFDQSE 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
            V ++    +   +   KD  G  R
Sbjct: 258 KVKQLLIKNQFTSIEIVKDLSGIGR 282


>gi|304385308|ref|ZP_07367653.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
           DSM 20284]
 gi|304328515|gb|EFL95736.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
           DSM 20284]
          Length = 285

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 9/233 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD  Q+F     + R++  E +  I    +FY     + S    PR ETE LV+  L  +
Sbjct: 52  LDQWQQF--QKDVQRAVNGEPVQYITNKANFYGREFYVDSRVLIPRVETEELVEHILN-A 108

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            P++ +   +R+LD+GTG+G + + L  E P ++   VDI+ +AL +A+ NA        
Sbjct: 109 HPQLNQ--PLRVLDIGTGSGNIAITLKLERPDWQVTAVDIASEALAVAQQNAHQQEAV-- 164

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            D  Q   F +V+G  FD+IVSNPPYI     D +   V +++P  +L    DGL  Y+ 
Sbjct: 165 VDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQSVIEYEPDKALFAPDDGLFWYKQ 224

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           I   ++ HL   G    E GY+Q   + + F E   +  V+  +D  G+DR+L
Sbjct: 225 IGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVKDVDVLQDLSGHDRIL 277


>gi|218247699|ref|YP_002373070.1| HemK family modification methylase [Cyanothece sp. PCC 8801]
 gi|218168177|gb|ACK66914.1| modification methylase, HemK family [Cyanothece sp. PCC 8801]
          Length = 300

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 11/214 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114
           WR+F    L +S     PRPETEL++D A+  ++    + D+     +DLGTG+GA+   
Sbjct: 90  WRNF---SLKVSPSVLIPRPETELIIDFAVK-AVKDSPRNDLALGHWVDLGTGSGAIACG 145

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L +  P      VD S  AL IA+ NA   G S R +  Q  W++ +E   G    ++SN
Sbjct: 146 LAQAFPKAIIHAVDSSEAALAIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSN 205

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + ++  L  EVRD +P ++LDGG DGL   R + +    +L   G+  VE+   Q
Sbjct: 206 PPYIPTKMLSALAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQ 265

Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR-VLLFC 263
              V ++      +  +    D  G DR  L +C
Sbjct: 266 GEKVAQLLTDSTAYKDIKILSDLAGIDRFALAYC 299


>gi|319942225|ref|ZP_08016541.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
 gi|319804278|gb|EFW01170.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
          Length = 276

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 13/213 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           + G ++F+     ++     PRP+TE+LV+ AL             ++LDLGTG+G + +
Sbjct: 73  LTGSQEFFGRHFHVTDAVLIPRPDTEVLVEQALLVVAGN------PKVLDLGTGSGCIGI 126

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSN 171
            L  E    +    D S  ALEIA+ NA    ++ + +  +  W+ ++     FD+IVSN
Sbjct: 127 TLALEISGAQVTATDASEAALEIARGNAAE--LAAKVEFREGFWWDALVPNSQFDLIVSN 184

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI     D   L   +++P  +L  GI+GL   + IADG   HL   G   +E GY+Q
Sbjct: 185 PPYIRP---DDDHLRNLEYEPLQALTDGINGLECLQAIADGAIAHLTPGGWLLLEHGYDQ 241

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +V  + E      V   KDYGGNDRV +  R
Sbjct: 242 GAEVRAMLEQAGFAAVRTKKDYGGNDRVTMGRR 274


>gi|253580115|ref|ZP_04857382.1| modification methylase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848634|gb|EES76597.1| modification methylase [Ruminococcus sp. 5_1_39BFAA]
          Length = 321

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 133/291 (45%), Gaps = 43/291 (14%)

Query: 6   DSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L  VTG S ++      +SV +     +L   I R   H  +  +     F    
Sbjct: 28  DAWLLLEYVTGKSRAYYFAYGEESVTESVAERYL-ELISRRAGHIPLQHLTHQAFFMGHE 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPF 121
             +  +   PR +TE LV+SAL       E    V+   ILD+ TG+G + +++LKE   
Sbjct: 87  FYVDKNVLVPRQDTETLVESAL-------ECMKAVKNPYILDMCTGSGCILISILKERAD 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----------------- 164
             G GVD+S +AL++A  NA T  V+E  + +QS+ FS ++ +                 
Sbjct: 140 AHGTGVDLSDEALKVAVRNARTLEVAEHAEFVQSNLFSEMQNIVYGTEYMKRTAVKDTVK 199

Query: 165 --------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                         +D+I+SNPPYI +  ++ L  EV+  DPR++LDG  DGL  YR I 
Sbjct: 200 MTECENSNRNYSRAYDMIISNPPYIPTAEIEDLMDEVKLHDPRMALDGMEDGLYFYRAIT 259

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
                HL   G    EIG +Q  DV  +    K   +   +D  G DRV+L
Sbjct: 260 KQAQDHLVPGGWLLYEIGCSQGEDVAALLRKYKFEDIEIRQDLAGLDRVVL 310


>gi|332526536|ref|ZP_08402648.1| hemK protein [Rubrivivax benzoatilyticus JA2]
 gi|332110804|gb|EGJ10981.1| hemK protein [Rubrivivax benzoatilyticus JA2]
          Length = 269

 Score =  108 bits (271), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 10/206 (4%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G R+F+ + L ++ D   PRP+TE+LVD AL    P        R+ DLGTG+GA+ L
Sbjct: 67  LVGEREFHGLTLRVTPDVLVPRPDTEVLVDWALELLPPGAP----ARVADLGTGSGAIAL 122

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
           A+    P       D S +AL +A  NA   G+   F  +  +W+S + G  FD+++SNP
Sbjct: 123 AVKNARPQASLTATDRSAEALAVAADNAGRLGLEIEF--VHGEWWSPLAGRRFDLVLSNP 180

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI         L+    +PR +L    DGL   R I      HL   G   +E GY+Q 
Sbjct: 181 PYIAGADPHLTALQ---HEPRGALTPEGDGLDALRAIVSAAQAHLEPGGWLLLEHGYDQA 237

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDR 258
             V  +        V+  +D GG  R
Sbjct: 238 DAVQALLAGAGFTQVSTRRDLGGQPR 263


>gi|325971907|ref|YP_004248098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta sp. Buddy]
 gi|324027145|gb|ADY13904.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta sp. Buddy]
          Length = 286

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 13/259 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +VTG    + I+  D VL D Q   LT+     L H+ +  ILG R+FY    
Sbjct: 28  DARLLLQQVTGFDQAKQILFFDKVLTDAQLDSLTSLRKVRLSHKPMAYILGRREFYGRDF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE L+++ LAF+     K D   I+D+ TG+G + + L  E     G 
Sbjct: 88  QVDERVLIPRSDTETLIEAVLAFA---KNKTDTPSIIDVCTGSGCIGITLALE----LGS 140

Query: 126 GV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            V   D+S  AL +A+ NA    VS     L  D  S  +  +D+IVSNPPY+ +   D 
Sbjct: 141 AVTLTDLSEGALAVARENA-RRLVSRPLTFLHGDLLSPTDKKYDIIVSNPPYLTASWCDE 199

Query: 183 LGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           +  EV+ ++PR++L+G  +DGL   R +      HL   G   +E  Y Q   V ++  S
Sbjct: 200 VAFEVQ-WEPRLALEGFSLDGLELIRALVAQSLDHLAAGGALFLECDYRQAETVKQLLVS 258

Query: 242 RKLFLVNAFKDYGGNDRVL 260
            +   V   KD  G +RV+
Sbjct: 259 SRFTNVRIEKDLAGRERVV 277


>gi|260891993|ref|YP_003238090.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ammonifex degensii KC4]
 gi|260864134|gb|ACX51240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ammonifex degensii KC4]
          Length = 287

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 10/203 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ++G ++F+ + L ++     PRPETELLV++ L     +++ +    ++D
Sbjct: 63  RRLAGEPLAYLIGKKEFWGLELEVTPAVLVPRPETELLVETGLE----KVKGKGSPILVD 118

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---- 159
           +GTG+GAV ++     P  + + +DIS +AL  A+ NA  +GV ER   +  D  S    
Sbjct: 119 VGTGSGAVAVSWAVSLPQARLLALDISPEALACAQRNARRHGVEERITFMAGDLLSPLKE 178

Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             V G  DV+ +N PYI    +  L  EVR  +PR +LDGG DGL+ YR +     + L 
Sbjct: 179 TPVAGKVDVVGANLPYIPRAFLPALSREVRR-EPRQALDGGTDGLAFYRRLVLQAKQVLR 237

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
             G    EI   Q+   + +F+ 
Sbjct: 238 PGGYLLCEIAPWQRSGALELFDE 260


>gi|322421624|ref|YP_004200847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter sp. M18]
 gi|320128011|gb|ADW15571.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter sp. M18]
          Length = 286

 Score =  108 bits (270), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC    L    + ++ D  L D +     + + R  K E +  ILG ++F  +  
Sbjct: 32  EAEWMLCEALSLDRVGLYLNFDKPLSDAELAAYRSMVARRGKREPLQYILGTQEFMGLEF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKG 124
            ++     PR +TE+LV  A       +++  V R +LD+G G+G V +AL K  P  + 
Sbjct: 92  QVTPAVLIPRHDTEVLVTEA-------VKRGAVARSVLDIGAGSGCVAVALAKALPPAEI 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+S +ALE+A+ NA  NG +  F   Q   F    G  FD++VSNPPYI +  +  L
Sbjct: 145 CSVDVSGEALEVARGNAERNGATVHF--FQGSLFEPFAGRHFDMVVSNPPYIPNYELATL 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             EVR F+P  +LDGG DGL  YR I      +LN  G    E+G  Q   V+ + +S
Sbjct: 203 QAEVRGFEPMGALDGGGDGLDFYRRIISDAPGYLNPGGWLIFEVGAGQAPQVLGLLQS 260


>gi|126695681|ref|YP_001090567.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9301]
 gi|126542724|gb|ABO16966.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9301]
          Length = 289

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 17/235 (7%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +SV DD         +++S   + +  I  WRD   ++L +++    PR ETEL+VD  +
Sbjct: 62  ESVWDDH--------LLKSCPIQYLCGITFWRD---LKLKVTNKVLIPRAETELIVD--I 108

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            F++ + +K + +   +LGTG+GA+ +AL    P  + V  DI   ALEIA  N + +  
Sbjct: 109 VFNIFQ-KKSEKLFFAELGTGSGAISIALALAYPLSEVVATDIDQDALEIATKNFINSSK 167

Query: 147 SERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                    +W+S +E   G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL
Sbjct: 168 QSNLKFYCGNWWSPLECFKGKIDLAISNPPYIPRDTYEKLPKEVKNFEPKVALLGGEDGL 227

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            H+R I       L  +G   +E  ++Q   V ++    K   +   KD  G  R
Sbjct: 228 EHFREIIQKAPLFLKDNGWLILENHFDQSEKVKQLLIKNKFTSIEIVKDLSGIGR 282


>gi|117617744|ref|YP_857648.1| protein methyltransferase HemK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559151|gb|ABK36099.1| protein methyltransferase HemK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 282

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 15/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + LC +       ++  P+  LD  Q   L   + R L  E I  ++G R+F+++ L
Sbjct: 23  DADALLCHLLECRRSYLMTWPERELDAAQLATLQGWLERRLNGEPIAHLIGEREFWSLPL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE+LV+ AL   LP         +LDLGTGTGA+ LAL  E P     
Sbjct: 83  KVSPATLIPRPDTEVLVEQALG-RLP----AGPCAVLDLGTGTGAIALALKSERPDADVW 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-------SSVEGLFDVIVSNPPYIESV 178
            VD    A  +A++N+   G+    +     WF       SS    F +IVSNPPYI+  
Sbjct: 138 AVDRMPAAAALARANSAALGLP--IEVRDGSWFEPLVEPSSSKAPRFAMIVSNPPYIDGA 195

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  +VR F+PR +L     GL+  R I  G   HL   G   +E G+ Q   V ++
Sbjct: 196 DPHLDEGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLLPGGWLLLEHGWQQGEAVRQL 254

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
              +    V   +DYG N+RV L
Sbjct: 255 LLQQGYLQVETVRDYGDNERVTL 277


>gi|149183884|ref|ZP_01862275.1| modification methylase, HemK family protein [Bacillus sp. SG-1]
 gi|148848403|gb|EDL62662.1| modification methylase, HemK family protein [Bacillus sp. SG-1]
          Length = 289

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 19/253 (7%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           Q++ +   VL+D+ +      I   ++   I  I+G+ +FY  + +++     PRPETE 
Sbjct: 42  QLLANQRLVLEDKVKLEFARGITAHIQGTPIQHIIGFEEFYGRKFSVNEHVLIPRPETEE 101

Query: 81  LVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           LV     ++L +I K       +R  D+GTG+GA+ + +  E P    + VDIS  AL +
Sbjct: 102 LV----YYTLEKIRKHFSADGELRFADIGTGSGAIAVTMKLEKPELFVMAVDISANALHV 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           A+ NA   GVS  F  L+ D      S +   DV+VSNPPYI    +D L   V+D +P 
Sbjct: 158 ARKNADNLGVSVEF--LEGDLLEPLISRDEKLDVLVSNPPYIPLGELDSLSEVVKDHEPH 215

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAF 250
            +L GG  GL  Y+   + +   +    L   EIG  Q   V  +   R  F        
Sbjct: 216 SALFGGESGLEFYQRFMEELPLVMKDRCLIGFEIGAGQGEAVAGML--RGAFPEAHTEII 273

Query: 251 KDYGGNDRVLLFC 263
            D  G DR ++FC
Sbjct: 274 HDINGKDR-MVFC 285


>gi|148555444|ref|YP_001263026.1| HemK family modification methylase [Sphingomonas wittichii RW1]
 gi|148500634|gb|ABQ68888.1| modification methylase, HemK family [Sphingomonas wittichii RW1]
          Length = 274

 Score =  108 bits (270), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 11/249 (4%)

Query: 17  LSSHQVIVDPDSVL----DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           L +H + V  D++L    DD         + R + HE +  I+G RDF+ + L +     
Sbjct: 30  LMAHALGVSRDAMLLGRLDDPAPAGFAPLLARRVAHEPVAYIVGERDFWTISLKVGPGVL 89

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRP++E L+++A+         +   RILDLG G+GA+ LA L + P   G+GVD S  
Sbjct: 90  IPRPDSETLIEAAVG----HFGAKGPARILDLGVGSGALLLAALAQWPAASGIGVDRSAA 145

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A  IA+ NA   G++ + +    DW   ++  FD+++ NPPY+ES  +  L  +V + +P
Sbjct: 146 AAAIARDNAARLGLAGQAEIRLGDWAEGIDERFDLLLCNPPYVESGAI--LAPDVAEHEP 203

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             +L  G DGL  YR +A  +   L   GL +VEIG  Q   V+ +F +R     +  +D
Sbjct: 204 ASALFAGPDGLDDYRRLAPMIGGLLAAGGLAAVEIGAEQGDAVIALF-ARHGLAGSVRRD 262

Query: 253 YGGNDRVLL 261
             G DR +L
Sbjct: 263 LAGRDRAIL 271


>gi|255065352|ref|ZP_05317207.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sicca ATCC 29256]
 gi|255050177|gb|EET45641.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sicca ATCC 29256]
          Length = 275

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 110/225 (48%), Gaps = 15/225 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R LK E +  ILG R+FY     +  D   PRPETE LV++ +   LP   +     + 
Sbjct: 53  ARRLKGEPMAYILGGREFYGRWFEVGPDVLIPRPETEHLVEAVIGH-LPANGQ-----VW 106

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---- 158
           DLGTG+GAV + +  E         DIS  AL IA+ NA T G   R +     WF    
Sbjct: 107 DLGTGSGAVAVTVALERKDAAVRASDISGGALAIARKNAETLGA--RVEFALGSWFETDK 164

Query: 159 --SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S  +  FDVIVSNPPYIE+        ++R F+P+ +L    DGLS  R +A      
Sbjct: 165 TSSEDKHRFDVIVSNPPYIEAGDEHLSQGDLR-FEPQTALTDFADGLSCIRELAQRAPEF 223

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L + G   +E GYNQ   V +I  +     V+  +D  G DR+ L
Sbjct: 224 LKEGGWLLLEHGYNQGTAVRQILTANGFAEVSTQQDLAGLDRLTL 268


>gi|146302781|ref|YP_001197372.1| HemK family modification methylase [Flavobacterium johnsoniae
           UW101]
 gi|146157199|gb|ABQ08053.1| modification methylase, HemK family [Flavobacterium johnsoniae
           UW101]
          Length = 284

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 127/234 (54%), Gaps = 11/234 (4%)

Query: 33  RQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
            + F + ++++  LK E  I  +LG  +FY +   ++ +   PRPETE LV+  ++ +  
Sbjct: 52  EEDFVVWDSLLAQLKKEVPIQYLLGKTNFYGLDFEVNENVLIPRPETEELVEWIISEN-K 110

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
            I++++ ++ILD+GTG+G + ++L K  P      +D+S KA+E AK NA+ N V+  F 
Sbjct: 111 GIDRKEKIKILDIGTGSGCIAVSLAKNLPNADVYAIDVSKKAIETAKRNAIRNDVNVTFI 170

Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGIDGLSHY 206
             D LQ++    ++  +DVIVSNPPYI ++  + +   V D++P ++L  D   D L  Y
Sbjct: 171 FQDILQAE---ELKCKYDVIVSNPPYIRNLEKEEIKKNVLDYEPHLALFVDDN-DALLFY 226

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           R IA     +L   G    EI      +++ +        ++  KD   NDR++
Sbjct: 227 RKIASLAQNNLLAKGQLYFEINQYLGKEMIELLGKMDFINIDLRKDIYDNDRMI 280


>gi|149372324|ref|ZP_01891512.1| putative protoporphyrinogen oxidase [unidentified eubacterium
           SCB49]
 gi|149354714|gb|EDM43277.1| putative protoporphyrinogen oxidase [unidentified eubacterium
           SCB49]
          Length = 282

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 4/192 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           ++ AI R L HE I  I+G   FY +   +   T  PRPETE LV+  L   +      D
Sbjct: 58  ISEAIQRLLLHEPIQYIIGETAFYGLPFKVDRHTLIPRPETEELVEWIL---VEAANNED 114

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTG+G + ++L KE    +    DIS  AL++A+ NA+TN V  RF  +    
Sbjct: 115 DKEILDIGTGSGCIAVSLAKEFDKAQVSAYDISEGALKVAQENALTNKVEVRFKNVDILA 174

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216
              +E  FDVIVSNPPY+  +    +   V + +P  +L     D L  YR IA    + 
Sbjct: 175 LDELEQSFDVIVSNPPYVRDLEKKMMQANVLEHEPATALFVSDTDPLIFYRKIAALAFKS 234

Query: 217 LNKDGLCSVEIG 228
           L K+GL   EI 
Sbjct: 235 LKKNGLLYFEIN 246


>gi|291561382|emb|CBL40181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SS3/4]
          Length = 387

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 123/257 (47%), Gaps = 53/257 (20%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109
           + +ILG ++F  +   ++     PR +TE LV+  L       E++D  + ILD+ TG+G
Sbjct: 128 LQQILGQQEFMGLTFFVNEHVLIPRQDTETLVELVLN------EQKDKNISILDMCTGSG 181

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNA--------VTN-GVSERFDTLQ------ 154
            + ++L K   +    G DIS +AL++AK N+        V N  VS R + +Q      
Sbjct: 182 CIAVSLKKLGGYACVEGADISEEALKVAKRNSEEILENSDVNNDAVSSRTEQIQNCTNLT 241

Query: 155 -----------------------------SDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
                                        SD FSS      F+VIVSNPPY+ S +++ L
Sbjct: 242 NNQNKQDNSEERMVSEVRRGSQTGVTFRHSDMFSSFRETEQFNVIVSNPPYVPSAVIEEL 301

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD +PR +LDG  DGL  YR +A+  ++HL   G    EIGY+Q + V  + ++  
Sbjct: 302 EPEVRDHEPRGALDGTADGLYFYRILAEECAKHLTPGGHVYFEIGYDQGMAVKELLDNHG 361

Query: 244 LFLVNAFKDYGGNDRVL 260
                  +D  G DRV+
Sbjct: 362 FKDTRVIQDLTGKDRVV 378


>gi|238023220|ref|ZP_04603646.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147]
 gi|237865603|gb|EEP66743.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147]
          Length = 275

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 121/260 (46%), Gaps = 19/260 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  +TG ++ Q+I      L   Q   L   I R    E I  ++G R+FY     +S 
Sbjct: 21  LLQHITGYTASQLITRDREPLPKDQADQLHRLIARRSAGEPIAYLIGTREFYGRAFVVSP 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE L+++AL     R+ +  V  + DLGTG+G + ++   E P  +    DI
Sbjct: 81  AVLIPRPETEHLLEAALQ----RLPENGV--LWDLGTGSGIIAVSAKCERPDARVFASDI 134

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVDCL 183
           S +AL +A+ NA        F   Q  WF++       +    +I SNPPYIE+   D  
Sbjct: 135 SAEALAVAQQNAAAWCAPVSF--AQGAWFAANQVFRLPQHSVHIIASNPPYIEA---DDP 189

Query: 184 GLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L+  D  ++P  +L    DGL+H R IA     +L + G   +E GY+Q   V  I   
Sbjct: 190 HLQQGDLRYEPPAALTDFADGLAHIRHIAQHAPAYLRRHGWLLLEHGYDQGQAVRDILAR 249

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                +   +D+ G DRV L
Sbjct: 250 FGFCQIETQQDWAGLDRVTL 269


>gi|302390588|ref|YP_003826409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermosediminibacter oceani DSM 16646]
 gi|302201216|gb|ADL08786.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermosediminibacter oceani DSM 16646]
          Length = 290

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 17/263 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G+    + + P+  L   +       + +      +  I G ++F+ +  
Sbjct: 25  DAEVILANVLGVRRIDLFIHPERRLCAEEIRTYRALVEKRSSRVPVAYITGSKEFFTLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE LV+  L     RI      ++++L  G+GAV +++     FFK  
Sbjct: 85  HVREGVLIPRPETEFLVEEILR----RISWVTKPKVVELCCGSGAVAVSVA----FFKKD 136

Query: 126 GV----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            V    DIS  A ++   NAV +GV +R   L+ D +   E    G FDV+ +NPPYI S
Sbjct: 137 AVVYASDISETAGDVTLLNAVKHGVEDRVLFLKGDLWEPFEAEGLGDFDVVAANPPYIPS 196

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             ++ L  +V+ ++PR++LDGG DGL  YR I  G  R L   G   +E G +Q   +  
Sbjct: 197 GEIENLPEDVK-YEPRVALDGGPDGLKFYRRIIAGAPRFLKPGGSIVLEFGKDQAGQIAD 255

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           + +      +   KDY G +RV+
Sbjct: 256 LLKRAGFGGIKILKDYAGLERVI 278


>gi|32491093|ref|NP_871347.1| hypothetical protein WGLp344 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166300|dbj|BAC24490.1| hemK [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 281

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 139/264 (52%), Gaps = 20/264 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++++S   L  V  + S ++I+  ++ L   Q + L N ++R    E I  ++   +F++
Sbjct: 25  SIKESELLLKHVLRVDSKKIILHGENYLTKNQYYKLKNLLIRRKLGEPISYLIKSHEFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++ +S   F PR +TE L+++AL+  L     +   RIL+LG+G+G + L+L KE+P +
Sbjct: 85  IKIKISCGIFIPRHDTECLIETALSLPL-----KKESRILELGSGSGVISLSLGKENPKW 139

Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              G+D + K++ +++ NA + N  + +F  +   +    + ++ +I++NPPYI+     
Sbjct: 140 IITGIDKNKKSIFLSRKNAKMLNINNVKFKKINWKYLKD-KKIYSMIITNPPYIKKN-DP 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           CL      F+P+ +L  G DGL   + I     + L + G   VE G+ Q  DV      
Sbjct: 198 CLLKGDLKFEPKSALISGRDGLKDIKIICKISKKFLKRKGYLLVEHGFQQGEDV------ 251

Query: 242 RKLFLVNAFK------DYGGNDRV 259
           R LFL N +K      DY   +RV
Sbjct: 252 RNLFLSNGYKSVCTCFDYTRKERV 275


>gi|293375559|ref|ZP_06621833.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sanguinis PC909]
 gi|325836756|ref|ZP_08166223.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sp. HGF1]
 gi|292645776|gb|EFF63812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sanguinis PC909]
 gi|325491134|gb|EGC93423.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sp. HGF1]
          Length = 283

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 18/264 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLS 68
            L  VTG  S++++ D +  +   Q      ++   ++    +  I+G+  F+  +  ++
Sbjct: 28  LLMHVTGKESYEILADMNMEVPQEQVEEFERSVKTYVEQNIPVQHIMGYETFFGHKFIVN 87

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            D   PR ETE LV + L+ +   +     V+++D+GTG+GA+ + L  E P  +    +
Sbjct: 88  DDVLIPRFETEELVANVLS-TYDDVFDGAAVKLVDVGTGSGAIGVTLAVEEPNMEVTVTE 146

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIE-SVIVDCLG 184
           +S  ALE+AK NA   G +  F   Q D    +   GL FD++VSNPPYI  +  VD L 
Sbjct: 147 LSEAALEVAKKNAANLGANVTF--YQGDMLQPLIERGLKFDILVSNPPYIPLTEDVDPL- 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V+D +P ++L GG DGL  YR I     + +N+  + + E  YN K  +  +    K 
Sbjct: 204 --VKDNEPHLALFGGEDGLKFYRQILKDAHKVVNEKNIIAFEHAYNHKEAMAELV---KQ 258

Query: 245 FLVNA----FKDYGGNDRVLLFCR 264
              NA     KD  G DR+ +   
Sbjct: 259 HFPNAEFETLKDLNGKDRMTIIIN 282


>gi|309390219|gb|ADO78099.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium praevalens DSM 2228]
          Length = 289

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 126/260 (48%), Gaps = 10/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  +    + V  D  L  R+       I +  +   +  I+  ++F ++  
Sbjct: 25  DAEVLMADLLDMERINLYVKYDYPLKSREIDKYREMIKKRAQRIPVAYIIQKKEFMSLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE LV+  + +   R +     +I+D+ TG+GA+ ++L       K V
Sbjct: 85  KVEPGVLIPRPDTENLVEKVIKYC--RQQGLKTPQIIDVCTGSGAIAVSLAHYLQKAKVV 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESVIV 180
           G DIS  AL+IA+ N   + ++ER   L+SD         ++G+ D++VSNPPYI    +
Sbjct: 143 GTDISNSALKIARQNMKKHDLTERMSILKSDLLKEFIKREIKGI-DILVSNPPYITEAEM 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV+  +P+ +L  G DGL  YR +     + L   G   +EIGY Q   V  IF 
Sbjct: 202 ETLAPEVKK-EPKKALVAGKDGLDFYRRLIPEAEKVLKNGGKLFLEIGYQQAAAVREIFG 260

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     +   KDY  NDR++
Sbjct: 261 AN-WSEIEVEKDYSENDRIV 279


>gi|217077796|ref|YP_002335514.1| methyltransferase [Thermosipho africanus TCF52B]
 gi|217037651|gb|ACJ76173.1| methyltransferase [Thermosipho africanus TCF52B]
          Length = 261

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 24/259 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +++  + ++TG +   ++  P+    ++  F L N   + L    +  +L  + FY    
Sbjct: 19  EAYLVIKKITGKTKEYLVAHPEYQFCEQSFFDLLN---KRLVGFPLSYLLNEKSFYKHNF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETELLV++AL      I+K  + ++ ++G G+GAV +++L E+    G 
Sbjct: 76  YVEEGVLIPRPETELLVENALKV----IDKEKIKKVAEIGVGSGAVIISILLETNCV-GF 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDC 182
           G DIS KALEIAK NA    V +R D     +    +  +D   +IVSNPPY+++     
Sbjct: 131 GTDISKKALEIAKKNARKFRVIDRLDLRLGKFLEPFKNEYDEIELIVSNPPYVKN--NSN 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  F+P+ +L GG DGL  YR      S  LN   +  +EIG++Q       F  +
Sbjct: 189 LQKEVM-FEPKEALFGGEDGLDFYREFLS--SYDLN-GKIVVMEIGHDQG----DFFRKK 240

Query: 243 KLFLVNAFKDYGGNDRVLL 261
                N  KDY GNDR+++
Sbjct: 241 DW---NVIKDYSGNDRIVI 256


>gi|307244043|ref|ZP_07526162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492567|gb|EFM64601.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus stomatis DSM 17678]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC + G    +++++    LD  +     + I + L    I  I+  ++F  +  
Sbjct: 24  DVEIILCHILGWDRVKLMINYGQDLDSDKMSIFEDMIAKRLDQMPIAYIINKKEFMGLDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLA---LLKES 119
            +      PRP+TELLV+  L  S+  +E     R   +LD+ TG+GA+ L+   L K+ 
Sbjct: 84  YVDERVLIPRPDTELLVED-LVESIGEMESTKQARDINVLDMCTGSGAIILSGASLWKDR 142

Query: 120 P----------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166
                          +GVDIS  ALE+A  N  + G+ +    ++SD F+++    G  D
Sbjct: 143 AKEDSGKAKDGTVNFIGVDISKSALEVATINRKSFGL-DTVKLIESDLFTNLGDYRGCLD 201

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYIE  +++ L  +V+D++PR++L GG DG+  Y  I +    +L   G    E
Sbjct: 202 IIVSNPPYIEDQVIEGLERDVKDYEPRLALAGGNDGMDFYNRIIEDAYDYLKLGGKLVFE 261

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G++Q   +++             KD  G DR++
Sbjct: 262 SGHDQAEKILKKMAQVGYTKAYTKKDIQGFDRLV 295


>gi|187930215|ref|YP_001900702.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia pickettii 12J]
 gi|187727105|gb|ACD28270.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia pickettii 12J]
          Length = 300

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 11/258 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDTCAIDVAARARISELAARRLAGEPMAYLLGEREFFGRTF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TELLV+ A    L  +E+ D   +LD+GTG+G + + +       +  
Sbjct: 91  KVTPAVLIPRPDTELLVEQA----LDHLEECDAPAVLDMGTGSGIIAITIALARRDARVW 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180
             D S  AL +A  NA   G +    T   DW+ ++ G      FD+I SNPPYI +   
Sbjct: 147 ATDASADALAVAIDNAKALGATN-VQTALGDWYGALAGTDAPPAFDLIASNPPYIAATDA 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGL H  +I  G    L   G   VE GY+Q   V  +  
Sbjct: 206 HLDQGDLR-FEPASALTDHDDGLRHLCSIVAGAPARLVSGGWLLVEHGYDQGEPVRALLG 264

Query: 241 SRKLFLVNAFKDYGGNDR 258
                 V   +D  G+DR
Sbjct: 265 GAGFANVFTAQDLAGHDR 282


>gi|299537973|ref|ZP_07051259.1| HemK-like protein [Lysinibacillus fusiformis ZC1]
 gi|298726555|gb|EFI67144.1| HemK-like protein [Lysinibacillus fusiformis ZC1]
          Length = 285

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 20/280 (7%)

Query: 1   MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46
           M+AL  + SFL                V G S  +V++     L   Q+      I    
Sbjct: 7   MEALEWASSFLVDNGCEQTAARIVMQHVLGTSYGEVMLHLQDELTAAQQMKFIELIEEHA 66

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
               +   +G+ +FY     +      PRPETE LV   +   LP++  +  +++ D+GT
Sbjct: 67  NGRPVQYCVGYEEFYGRSFLVDESVLIPRPETEELVLGTIN-RLPKLFTKQTLKLADIGT 125

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165
           G+GA+ +++  E P    +  D+S  AL  A+ NA    +    D    D    + G  F
Sbjct: 126 GSGAIAISMKLECPALSVIATDLSEAALATAQKNA--KRLEADIDFRLGDLADPLAGEKF 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+++SNPPYI       +   V + +P  +L    DGL  YR +A+ +  ++N+  L  +
Sbjct: 184 DIVLSNPPYIAFNEAQAMSSVVLEHEPHSALFAEEDGLMLYRKLAEQLPAYMNRPALIGL 243

Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264
           EIGY Q   V + F+ S     V+  KD  G  R ++FC 
Sbjct: 244 EIGYTQGEKVAKFFQDSFPQATVSVEKDINGKPR-MIFCE 282


>gi|317132919|ref|YP_004092233.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ethanoligenens harbinense YUAN-3]
 gi|315470898|gb|ADU27502.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ethanoligenens harbinense YUAN-3]
          Length = 287

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 7/223 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  +LG  +F  +   +      PRPETELLV++A+A+   +       R+
Sbjct: 59  VERRAAGEPLQYLLGEWEFMGLPFKVGPGVLIPRPETELLVEAAIAYLNVQPPDAAAPRL 118

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L+L  G+G V ++  + +   + V ++ S  AL   ++N   +G+ +R   ++ D     
Sbjct: 119 LELCAGSGCVAISAARAT-GCEAVCLEYSADALGYLRANIALHGLEDRVRAVEGDMLLPP 177

Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            G+    FDV++ NPPYI +  +  L  EVR  +P ++LDGG DGL  YR +   V   L
Sbjct: 178 RGVLSGSFDVLLCNPPYIRTEELPALQAEVRR-EPVLALDGGPDGLRFYRALCAWVP-VL 235

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              GL + E+G  Q  DV R+ E   L  V    DY G  R++
Sbjct: 236 RPGGLLACEVGMGQAEDVARLLEDAGLCNVAVRNDYAGIGRMV 278


>gi|213617487|ref|ZP_03372313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
          Length = 262

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 8/236 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAF 250


>gi|126657233|ref|ZP_01728399.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110]
 gi|126621504|gb|EAZ92215.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110]
          Length = 301

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 16/217 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-----LDLGTGTGAV 111
           WR F    L +S D   PRPETEL++D    F+L  ++      +     +DLGTG+GA+
Sbjct: 91  WRRF---SLKVSPDVLIPRPETELIID----FALKAVQHSPNPHLSSGHWVDLGTGSGAI 143

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVI 168
            L L    P      VD S +AL IA+ NA+  G S +    Q  W++    ++G    +
Sbjct: 144 ALGLADSFPQATIHAVDTSIEALTIAQENALKEGFSSQIHLYQGSWWTPLQHLQGQVSAM 203

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI + ++  L  EV++ +P ++LDGG +G      + D    +L   G+  VE+ 
Sbjct: 204 VSNPPYIPTSLLSQLQPEVKEHEPILALDGGHEGFDAINYLIDTSPNYLISGGIFLVEMM 263

Query: 229 YNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
             Q   + ++  ES +   +N   D  G  R  L  R
Sbjct: 264 AGQGEKISKLLQESSRYQDINLLPDLAGIARFALAYR 300


>gi|225025403|ref|ZP_03714595.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC
           23834]
 gi|224941847|gb|EEG23056.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC
           23834]
          Length = 270

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 123/252 (48%), Gaps = 15/252 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +CR+T +   ++I      L   QR  L     R  + E +  +LG R+FY     +S  
Sbjct: 24  VCRITHV---RLISRSGDELPQPQRAVLDMLAARRRRGEPMAYLLGSREFYGRSFRVSPA 80

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETELLV++ALA   P        R+ DLG G+G + L +  E P       DIS
Sbjct: 81  VLIPRPETELLVEAALARLPP------GGRLWDLGCGSGIIGLTVALERPDAAVRASDIS 134

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEV 187
             AL +A++NA   G S   +  Q  WF+++   EGLFD+I SNPPYIE+        ++
Sbjct: 135 PDALAVAQANAAALGAS--IEWAQGSWFAALPAAEGLFDIIASNPPYIEAGDGHLQQGDL 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R F+P  +L    DGLSH RT+A     +L   G   +E G+NQ   V  +         
Sbjct: 193 R-FEPAAALTDFADGLSHIRTLAAQAQGYLKPGGWLLLEHGWNQGEAVRGMLAEHGWQQE 251

Query: 248 NAFKDYGGNDRV 259
              +D  G DRV
Sbjct: 252 ETLRDLAGLDRV 263


>gi|160900909|ref|YP_001566491.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Delftia acidovorans SPH-1]
 gi|160366493|gb|ABX38106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Delftia acidovorans SPH-1]
          Length = 289

 Score =  107 bits (268), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 102/218 (46%), Gaps = 7/218 (3%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  +LG ++FY + L + +   +PRP+TE LVD AL     + +     R++
Sbjct: 63  ARRLGTEPVAYLLGHKEFYGLDLAVDARVLDPRPDTETLVDWALELMPAQSQAARACRVV 122

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTG+GA+ LAL  + P      VD S  AL +A +NA    +  +F      W   + 
Sbjct: 123 DLGTGSGAIALALQSQRPGATVWAVDASADALAVASANATRLQLGVQF--AHGSWLQPLA 180

Query: 163 GL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           G   FD+IVSNPPYI     D   L+    +P  +L  G DGL   R I       L + 
Sbjct: 181 GQAPFDLIVSNPPYIRD---DDPHLQALAHEPLSALASGADGLVDIRAIITQAPALLVRG 237

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G   +E G++Q   V  +        V    D GG  R
Sbjct: 238 GWLLMEHGWDQADAVAALLRHAGFGDVQHRHDLGGIAR 275


>gi|283768250|ref|ZP_06341163.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bulleidia extructa W1219]
 gi|283105127|gb|EFC06498.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bulleidia extructa W1219]
          Length = 284

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 114/226 (50%), Gaps = 16/226 (7%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS---LPRIEKRDVVR 100
           R L  E +  +LG+  FY  ++ ++ +   PR ETE L  + L       P +EK D+  
Sbjct: 62  RILNGEPMAHVLGYSWFYGYKMLVNGEVLIPRYETEELCANILNRMDTFFPHLEKIDIA- 120

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159
             D+GTG+GA+ + L KE    +    DIS +A+E+AK NA  N  + E F     D   
Sbjct: 121 --DVGTGSGAIAVTLCKEEKKCQMRASDISLEAIEMAKKNARLNEATIEFFVGNMLDPLI 178

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                 DV+V NPPYI     + +   V D++P I+L GG DGL +YR + +  +R L K
Sbjct: 179 EKGIYLDVLVCNPPYIPQE--EEMESSVVDYEPHIALFGGKDGLKYYREVFENANRILKK 236

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVN----AFKDYGGNDRVLL 261
               + E+G+NQ+  + ++ +     L N      KD  G DR+L 
Sbjct: 237 KSFMAFEMGWNQREAISQLIQE---MLPNDRFEILKDMNGKDRMLF 279


>gi|73667468|ref|YP_303484.1| modification methylase HemK [Ehrlichia canis str. Jake]
 gi|72394609|gb|AAZ68886.1| Modification methylase HemK [Ehrlichia canis str. Jake]
          Length = 280

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 124/257 (48%), Gaps = 5/257 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD    +  +    S   I+DP   +D          I +   +  +  I+G R+F++  
Sbjct: 25  RDVEIIIKHLIDTKSLVTILDPYMSVDKCDVEMFWKMIKQRAANVPVSHIIGRREFWSTE 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +++D  +PRP++E ++ S LA   P   +R V+   D GTG+G +   LL +     G
Sbjct: 85  FIVNADVLDPRPDSETIISSVLAM-YPCKNRRLVIG--DFGTGSGCLLAVLLLKYRNAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + ++ S KA  +A  N   + +S R     S W  +   +FD+IVSNPPYI+   +  L 
Sbjct: 142 IAIEKSVKAYRVAYQNFKNHQLSSRVKLRLSSW-DNCYDVFDLIVSNPPYIKRSKIAKLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+ ++P I+L+GG  GL  Y  I   + R L K+G+  +EIG +Q   + RI     L
Sbjct: 201 PEVKLYEPMIALNGGPVGLEIYLQIFLVIKRCLKKNGVAILEIGEDQH-QIHRIVHKYGL 259

Query: 245 FLVNAFKDYGGNDRVLL 261
                  D  G  R ++
Sbjct: 260 KFCTYHNDLSGKLRCIV 276


>gi|268680052|ref|YP_003304483.1| modification methylase, HemK family [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618083|gb|ACZ12448.1| modification methylase, HemK family [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 273

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 15/225 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIE 94
           +  +A+ R  ++E +  ILG   FY+    + +    PRPETE+LVD A  LA +LP+  
Sbjct: 53  WWHSALKRRARYEPLEYILGRASFYDREFEVDARVLIPRPETEILVDKAVELAKTLPK-- 110

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 I+++G G+G + + L    P  K   VDIS +AL +++ NAV +GVS+R   +Q
Sbjct: 111 ---EAHIVEIGCGSGIISIMLALMLPDVKITAVDISNEALHVSQKNAVKHGVSKRIAFVQ 167

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGV 213
             +   V    D+IVSNPPY    I +   LE    ++P ++L GG+ G      I D  
Sbjct: 168 GSYLDGVSEPIDMIVSNPPY----IANHEALEENLSYEPSLALFGGVRGDEMLCHIMDLF 223

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                K  + + E+GY+Q+  ++  +  +K  +V+ ++D  G DR
Sbjct: 224 CE--RKVKVLACEMGYDQRYAIMD-YAKQKDLVVDFYQDLAGLDR 265


>gi|229000114|ref|ZP_04159684.1| Protein hemK [Bacillus mycoides Rock3-17]
 gi|229007634|ref|ZP_04165228.1| Protein hemK [Bacillus mycoides Rock1-4]
 gi|228753645|gb|EEM03089.1| Protein hemK [Bacillus mycoides Rock1-4]
 gi|228759651|gb|EEM08627.1| Protein hemK [Bacillus mycoides Rock3-17]
          Length = 283

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    + + Q+   TN I + +    +  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE L+   L   + R+  +  + I D+GTG+GA+ + L  E+   +   VDI+
Sbjct: 88  VLIPRPETEELIVGVLD-RIQRMFGKQELHIADIGTGSGAISITLALENQNLRMYTVDIA 146

Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +++E+AK NA   G +  F    L S ++ + + L DV+VSNPPYI       L   V+
Sbjct: 147 QESIEVAKENAKALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
           + +P+ +L GG DGL  YR   + +   L +  + + E+G  Q  DV R+ +       V
Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFPHAHV 265

Query: 248 NAFKDYGGNDRVLL 261
               D  G DR++ 
Sbjct: 266 EVVFDINGKDRMVF 279


>gi|218441827|ref|YP_002380156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cyanothece sp. PCC 7424]
 gi|218174555|gb|ACK73288.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cyanothece sp. PCC 7424]
          Length = 299

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 104/209 (49%), Gaps = 7/209 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR F   RL +S D   PRPETE ++D      L           +DLGTG+GA+ L L 
Sbjct: 90  WRKF---RLKVSHDVLIPRPETEYIIDIVQKAILDTPLDLSGGNWVDLGTGSGAIALGLA 146

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
                     VD S  ALEIA+ NA+  G+ +R    Q  W+  +E   G  + +VSNPP
Sbjct: 147 DLLTNATIYAVDTSLAALEIAEENAIELGLKQRIIFKQGSWWDPLEFLKGQINGMVSNPP 206

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI + I+  L  EV   +P ++LDGG DGL     + +    +L   G+  +E+   Q  
Sbjct: 207 YIPTEIIPTLQPEVAYHEPTLALDGGEDGLMSIDYLVEISPFYLRSGGIWLIEMMAGQGK 266

Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
            VV++ E++  +  +  F D  G DR +L
Sbjct: 267 KVVQLLENQGSYQNIQIFPDLAGIDRFVL 295


>gi|72162817|ref|YP_290474.1| modification methylase HemK [Thermobifida fusca YX]
 gi|71916549|gb|AAZ56451.1| modification methylase HemK [Thermobifida fusca YX]
          Length = 285

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 10/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVRRGELHTVADSDFDAR----YWECVARRAAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++V  A+  +L  ++  D + ++DLGTG+GA+ +++ +E P  +  
Sbjct: 82  EVGPGVFIPRPETEMMVSWAID-TLRAMDVADPL-VVDLGTGSGAIAISIAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++   AL  AK N   +G+ ER     +D         G  D++++NPPY+     D 
Sbjct: 140 AVEVDATALSWAKRNIARSGLGERITAHHADMRTCLPEYHGRVDLVITNPPYVPLDSADE 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  EVRD+DP I+L  G DGL   R +     R L   G  ++E G  Q +D+  +F E 
Sbjct: 200 IPPEVRDYDPAIALWAGPDGLDMIRQLEAVGRRLLRPGGYIAIEHGDGQGIDIPPLFPEE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   KD    DR ++  R
Sbjct: 260 LGWCEVRNRKDLAHRDRFVVARR 282


>gi|119477465|ref|ZP_01617656.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143]
 gi|119449391|gb|EAW30630.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143]
          Length = 285

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 112/217 (51%), Gaps = 13/217 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           + +R FLT  + R +  E I  I G R F+++ L +++ T  PRPETELLV+  L     
Sbjct: 51  EHERHFLT-LLERRIVGEPIAYITGERGFWSLDLQVNASTLIPRPETELLVEKTLEL--- 106

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            +       ILDLGTG+GA+ LAL  E   +  V  D+   A+ +A+SN     ++    
Sbjct: 107 -MSDAASADILDLGTGSGAIALALASEKSGWCIVASDVQPNAVALAESNKAKYSLN-NVT 164

Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRT 208
            L+S+WF ++    FDVIVSNPPYI+        LE  D  F+PR +L     GL+    
Sbjct: 165 VLESNWFDAIGNQCFDVIVSNPPYIDPQDNH---LEEGDVSFEPRSALVAENHGLADLEH 221

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           IAD    +L   G   +E GYNQ  D V+    R  F
Sbjct: 222 IADCAGAYLKDRGWLLLEHGYNQ-ADAVQALLLRAGF 257


>gi|323486284|ref|ZP_08091610.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum
           WAL-14163]
 gi|323400394|gb|EGA92766.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum
           WAL-14163]
          Length = 354

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 70/298 (23%)

Query: 32  DRQRFFLTNAIVRSLKHE-----SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +RQR   +  + R    +      I  ILG ++F  +  T+  +   PR +TE LV++ L
Sbjct: 60  NRQRLEKSYPVYRDYLEKRASRIPIQHILGNQEFMGLEFTVDENVLIPRQDTEKLVETVL 119

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS------- 139
                R  K   + +LD+ TG+G + ++L     + K    DIS  AL++AK        
Sbjct: 120 -----RDHKNQALSVLDMCTGSGCIAVSLAVLGGYDKVTAADISKAALKVAKKNVRRHFL 174

Query: 140 --------------------------------------------NAVTNGVS-------E 148
                                                       N  + G++       +
Sbjct: 175 VQKGTARSESTLISDTPWKLKMCTYVYQGGDAQEQETAGESVSDNGYSPGIARIPGVRKK 234

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            F  L+SD F ++E    FD+IVSNPPYI S ++D L  EV+D +PR++LDG  DGL  Y
Sbjct: 235 EFVLLESDLFLNLEQDEKFDIIVSNPPYIPSAVIDGLEPEVKDHEPRMALDGAEDGLYFY 294

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R +     R+L + G    EIG +Q   V ++  +     +   KD  G DRV+  CR
Sbjct: 295 RILVQQSGRYLKEGGFIYFEIGCDQAEAVGKLLTAAGFGEIETIKDEPGLDRVVRACR 352


>gi|325291371|ref|YP_004267552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324966772|gb|ADY57551.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 287

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K E +  ++  R+F  +   +      PRPETE+L++  +  +  R  K     +LDLGT
Sbjct: 73  KREPLAYLVKTREFMGLDFYVDRRVLIPRPETEMLIEKLIELAEKRAGKDKEYSLLDLGT 132

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165
           G+G + +A  +     K   VDIS  AL +A+ NAV +GV    D  Q D F+ V    F
Sbjct: 133 GSGVMAIAAARYIAGVKITAVDISEDALTVARQNAVKHGVE--IDFRQGDLFTPVANQKF 190

Query: 166 DVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           D I++NPPY+    + DC    +R  +P ++L GG DGL  YR +A      L+  G   
Sbjct: 191 DWILTNPPYVSLPEMEDCSPEVLR--EPHLALCGGEDGLEIYRRLAAQAGDFLHPGGKLL 248

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            EIG  Q   V ++F + K +    F D  G +R++L
Sbjct: 249 AEIGSAQAPAVCKLF-AEKGYSTKVFNDLAGLNRMIL 284


>gi|88800297|ref|ZP_01115864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Reinekea sp. MED297]
 gi|88777012|gb|EAR08220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Reinekea sp. MED297]
          Length = 275

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 117/235 (49%), Gaps = 9/235 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  L + Q     +   R L  E +  I+G R+F+++ L  +  T  PRP+TE+LV+  
Sbjct: 41  PEHELSEAQHHRFQDGCQRRLSGEPVAYIVGEREFWSLPLKTAPHTLIPRPDTEVLVEQV 100

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA   P  E     R +DLGTGTGA+ LAL  E P ++  G+D   +A+ +A  NA   G
Sbjct: 101 LA-DAPDGE----YRCVDLGTGTGAIALALKSERPKWQVEGIDRVPEAVALATENAQRLG 155

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +   F     +W + + +   D++VSNPPYI++        +VR F+P  +L     GL+
Sbjct: 156 LDVTFRV--GNWCADLADDSIDILVSNPPYIDADDEHLSQGDVR-FEPESALVADQHGLA 212

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
               I D   R L   G   +E G+ Q   V  + +      V+  +DYG  +RV
Sbjct: 213 DISIIVDQAQRCLRPGGGVFIEHGWQQGDAVRALLQDAGFLRVDTRRDYGNQERV 267


>gi|329770543|ref|ZP_08261921.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325]
 gi|328836292|gb|EGF85961.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325]
          Length = 251

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 104/184 (56%), Gaps = 6/184 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+  FY+ +  ++ D   PR ETE L+   L +   +  K+D  +ILDL TG+G 
Sbjct: 69  LSHLVGFDYFYDRKFKVTKDVLSPRMETEELIYKVLEY--IKKSKKDSFKILDLCTGSGI 126

Query: 111 VCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           + + L KE    + + V  DIS KAL IA  NA  N  +  F  ++SD F ++ G FD+I
Sbjct: 127 IAITLKKEIVEKYTEIVASDISEKALSIAIENANNNNANITF--IKSDLFDNISGKFDLI 184

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +SNPPYI       +   V ++DP ++L    DG+  YR I +    +L+KDG+   EIG
Sbjct: 185 ISNPPYISYKDKITIKDNVLNYDPHLALFAEEDGIYFYRKIIENAVHYLSKDGVIFFEIG 244

Query: 229 YNQK 232
           Y+QK
Sbjct: 245 YDQK 248


>gi|254495516|ref|ZP_05108440.1| methyltransferase, HemK family [Polaribacter sp. MED152]
 gi|85819872|gb|EAQ41029.1| methyltransferase, HemK family [Polaribacter sp. MED152]
          Length = 286

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 20/250 (8%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++V  D  ++ ++   L NAI R  K E I  I+G  +F+     ++ +T  PRPETE L
Sbjct: 42  LVVKSDFKINQQKLTDLNNAIDRLKKEEPIQYIIGHTEFFGYPFLVNKNTLIPRPETEEL 101

Query: 82  VDSALAFSLPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           V    A+ +  I   +      + ILD+GTGTG + ++L KE P      +D+S +ALEI
Sbjct: 102 V----AWIIEEINNNNTYKNKNISILDIGTGTGCIPISLAKELPNATISAIDVSDEALEI 157

Query: 137 AKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           AK NA+ N V+  F   D L +   S+++  +D+I+SNPPY+ ++    +   V + +P 
Sbjct: 158 AKKNALANKVNINFIEKDILNT---SNLDDNYDIIISNPPYVRNLEKVEINNNVLENEPH 214

Query: 194 ISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           ++L   D   + L  Y  IAD    HL K+G    EI      + + + +++    +   
Sbjct: 215 LALFVEDN--NPLIFYNKIADLALYHLTKNGSLFFEINQYLGKETIALLKTKHYKAIELR 272

Query: 251 KDYGGNDRVL 260
           KD   NDR+L
Sbjct: 273 KDIFKNDRML 282


>gi|330837037|ref|YP_004411678.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta coccoides DSM 17374]
 gi|329748940|gb|AEC02296.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta coccoides DSM 17374]
          Length = 287

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 119/257 (46%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V  +S  Q++    + + +         +   L    +  ILGWR+FY  R 
Sbjct: 27  DARLLLCAVMDVSQEQLLARWHTEVPEEASQRFAAMLSARLAATPMAYILGWREFYGRRF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +      PRP+TE L+++ALA+     +E  D   I D+ TG+GAV + L  E P  + 
Sbjct: 87  HVDERVLIPRPDTETLIEAALAWIQEHSLEAPD---IADICTGSGAVGITLALELPSSRV 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
              DIS  ALE+A  NA+  G        Q D    V    FD++VSNPPY+       +
Sbjct: 144 ALTDISASALEVATENAMRLGAGN-IRLYQGDVTEPVASESFDIVVSNPPYLTPHWYSHV 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V   +PR++L GG DGL+  R +  G    L  +G   +E  + Q  +V RI E   
Sbjct: 203 EAQVLK-EPRLALVGGDDGLTIIRRLVVGARSVLAPEGALFLECDWRQCDEVARIMERCG 261

Query: 244 LFLVNAFKDYGGNDRVL 260
                 + D  G  RV+
Sbjct: 262 FAQTWIYNDLAGRPRVV 278


>gi|328866298|gb|EGG14683.1| hypothetical protein DFA_10941 [Dictyostelium fasciculatum]
          Length = 335

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 134/267 (50%), Gaps = 27/267 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ DS      V GL  +  I   D  L   Q   L   I R L +E I  I+G + F+ 
Sbjct: 70  SMLDSRILFEHVVGLKENARI-PKDLQLTPTQNKDLQEVIERRLNNEPIAYIVGHKYFWK 128

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +   +  T  PRP++E L++  L   L   EK+  + ILDLGTGTG + L+LL+E    
Sbjct: 129 HKFKCNHSTLIPRPDSETLIEQIL--ELHNYEKQLPLNILDLGTGTGCLLLSLLEEFSNS 186

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPPY 174
           KGVG+D S  AL++AK N+++  +  R   +QS+W  S+           +++I+SNPPY
Sbjct: 187 KGVGIDQSLDALKVAKENSISLKMDNRSTFIQSNWVDSIVNQQHNNVPLKYNLIISNPPY 246

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDG--LCSV----- 225
           I       L   V+ ++P  +L    +GL  Y  I+  + +H  L++D   L ++     
Sbjct: 247 ISENEYQTLNPTVKQWEPITALVANDNGLREYDIISKSIRKHNLLSQDSNTLSNIPSFLV 306

Query: 226 -EIGYNQKVDVVRIFESRKLFLVNAFK 251
            EIG+ Q+  V      +KL + N F+
Sbjct: 307 FEIGHTQEESV------KKLVVDNGFE 327


>gi|77163924|ref|YP_342449.1| modification methylase HemK [Nitrosococcus oceani ATCC 19707]
 gi|254436166|ref|ZP_05049673.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
 gi|76882238|gb|ABA56919.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|207089277|gb|EDZ66549.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
          Length = 283

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 113/239 (47%), Gaps = 15/239 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L   Q       + R  K E +  I GW++F+++ L ++  T  PRPETE +V+   
Sbjct: 48  DRRLTPTQWVSFQRLLQRRAKGEPLAYIRGWQEFWSLNLQVTEATLIPRPETEQVVE--- 104

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +L R++    + + DLGTG+GA+ LA+  E P  + +  D+S + LE+A+ N    G+
Sbjct: 105 -LALQRLDLERALNVADLGTGSGAIALAMGSERPRARVIATDVSAETLEVARENGRRLGL 163

Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIES----VIVDCLGLEVRDFDPRISLDGGID 201
                 L  DWF  + G  F +I SNPPYI      +  + L      F+P I+L     
Sbjct: 164 CNVTFRL-GDWFVPLVGERFHLIASNPPYIAEGDPHLTQNGLA-----FEPDIALIAKDK 217

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           GL   R IA     HL   G   +E GY Q   ++ +F       V  F D  G  RV+
Sbjct: 218 GLGAARHIAMTAREHLLDGGWLLLEHGYEQGPSLLALFTQLGYQQVADFCDLAGLPRVV 276


>gi|254520298|ref|ZP_05132354.1| modification methylase [Clostridium sp. 7_2_43FAA]
 gi|226914047|gb|EEH99248.1| modification methylase [Clostridium sp. 7_2_43FAA]
          Length = 587

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 120/240 (50%), Gaps = 9/240 (3%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           D +  L D + +F    I +      I  ILG  +F  +   +      PR +TE+LV+ 
Sbjct: 349 DKNVSLKDEKEYF--ELIEKRKNKMPIKYILGETEFMGLDFNVEEGVLIPRGDTEILVEE 406

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L+     I + D + + DL +G+GA+ +++           +D      ++ K N + +
Sbjct: 407 VLSI----INEEDELNVCDLCSGSGAIGISIANYRKKINVEEIDFYEVPEKVTKKNIIKH 462

Query: 145 GVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           G+  R   ++SD       +G  +DVIVSNPPYI++  +  L  +V+ ++P  +LDGG D
Sbjct: 463 GLESRVKFIKSDLLKEPINQGKKYDVIVSNPPYIKADEISNLMDDVKKYEPHTALDGGDD 522

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GL  Y+ I +     LN +G+ + EIGY+Q  +V  + +    + +   KD  G DRV+L
Sbjct: 523 GLVFYKRIIEESKTTLNNEGVLAFEIGYDQGEEVSNLMKEAGFYNIKLVKDLAGLDRVVL 582


>gi|322389536|ref|ZP_08063087.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           parasanguinis ATCC 903]
 gi|321143811|gb|EFX39238.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           parasanguinis ATCC 903]
          Length = 278

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 9/223 (4%)

Query: 41  AIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           +I   LKH      I+G  +F     T+      PRPETE LV    A  L   +++  +
Sbjct: 57  SIFEQLKHHVPAQYIIGSAEFCGHVFTVDERVLIPRPETEELV----ALILEENDEK-AL 111

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG+GA+ ++L    P ++    D+S +AL +A+ NA     +  F +  SD   
Sbjct: 112 RVLDIGTGSGAIAISLALARPTWQVQASDVSEEALALAQENAKQLEAALEFKS--SDVLD 169

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +EG +D+IVSNPPYI    V+ +G  V   +P ++L    DG + Y  IA      L  
Sbjct: 170 ELEGPYDLIVSNPPYISRDDVEEVGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTP 229

Query: 220 DGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261
           DG   +EIGY Q   V  +F E+     V   KD  G DR+++
Sbjct: 230 DGKIYLEIGYKQGAKVKELFQEAFPDKRVRVLKDQFGQDRMVV 272


>gi|254525471|ref|ZP_05137523.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9202]
 gi|221536895|gb|EEE39348.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9202]
          Length = 289

 Score =  107 bits (266), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 9/205 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD   ++L ++     PRPETEL+VD  + F +   +K +     +LGTG+GA+ +AL 
Sbjct: 84  WRD---LKLKVTDKVLIPRPETELIVD--IVFKIFG-KKSNKFLFAELGTGSGAISIALA 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
              P   G+  DI   ALE+A  N   +           +W+S +E   G  D+ +SNPP
Sbjct: 138 LAYPLSHGMATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGRLDLAISNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S   + L  EV++F+P+I+L GG DGL H + I       L + G   +E  ++Q  
Sbjct: 198 YIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILENHFDQSE 257

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
            V ++    +   +   KD  G  R
Sbjct: 258 KVKQLLIKNQFTSIEIVKDLSGIGR 282


>gi|91216496|ref|ZP_01253462.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
           700755]
 gi|91185290|gb|EAS71667.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
           700755]
          Length = 281

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 130/250 (52%), Gaps = 15/250 (6%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L +H ++++ ++ LD ++      A  R    E IH ILG+ +F+ +R  +++    PRP
Sbjct: 38  LKTHDLLLESEANLDSKKLVEFKKAQSRLEAQEPIHYILGYTEFFGLRFRVNTSVLIPRP 97

Query: 77  ETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           ETE LV+  L    FS      +  + ILDLGTG+G + +AL K  P  K   +DIS +A
Sbjct: 98  ETEELVEWILEDQKFS------KSQLSILDLGTGSGCIPIALAKHLPQAKLKALDISSEA 151

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           L++A+ N+  N    + +  Q+D  +   +    D++VSNPPY++      +   V   +
Sbjct: 152 LKLAELNSEDNNT--KIEYTQADLLTLKHLPEEIDIVVSNPPYVKFNEQAQMQDNVLKNE 209

Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           P ++L     D L  YR IA+  S+ + K  L  VEI  N   +  ++F+S     +   
Sbjct: 210 PHLALFVKDSDPLIFYRRIAELTSK-MRKRPLVYVEINQNLAEETRQLFKSFGFQSLELR 268

Query: 251 KDYGGNDRVL 260
           KD+ GN R+L
Sbjct: 269 KDFRGNYRML 278


>gi|113475328|ref|YP_721389.1| HemK family modification methylase [Trichodesmium erythraeum
           IMS101]
 gi|110166376|gb|ABG50916.1| modification methylase, HemK family [Trichodesmium erythraeum
           IMS101]
          Length = 301

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 14/209 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL- 115
           WR+F    L + S    PRPETELL+D  L  +   +E       +D+GTG+GA+   L 
Sbjct: 93  WRNF---SLRVGSGVLIPRPETELLIDLVLVATNSVLELGHG-NWVDMGTGSGAIACGLA 148

Query: 116 --LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVS 170
             L ++  +   G+D S  AL IA+ NAV+ G  +R +  +  W+  +E   G    +V+
Sbjct: 149 DILTDASIY---GIDCSPVALAIARQNAVSLGYGDRINFYEGSWWQPLEHLRGQVSGMVA 205

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S +V  L  EVR  +P ++LDGG+DGL   R + +    +L   G+  VE+   
Sbjct: 206 NPPYIPSDMVSTLEPEVRKHEPHLALDGGVDGLDCIRFLVETAPLYLVSGGVWLVEMMAG 265

Query: 231 QKVDVVRI-FESRKLFLVNAFKDYGGNDR 258
           Q  +V +I ++      V  F D  G DR
Sbjct: 266 QSEEVAKILYDHGSYCQVEIFGDLEGVDR 294


>gi|149276500|ref|ZP_01882644.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39]
 gi|149233020|gb|EDM38395.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39]
          Length = 288

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 9/259 (3%)

Query: 10  FLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           ++C   V+GL+   V ++ + +L D++    +       K   +  +LG   FY   + +
Sbjct: 28  YVCIEHVSGLNRMDVRMNWERILLDQEEQRYSEIATAMTKGRPVQHVLGETTFYGFSIQV 87

Query: 68  SSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           S D   PRPETE LVD   + L     +  +   +R++D GTG+G + +A+ K       
Sbjct: 88  SPDVLIPRPETEELVDWILTTLRSDFQQAPETGPLRVIDFGTGSGCIPIAIKKHIAEAVV 147

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCL 183
             VDIS  AL++AK NA+ N    RF  +Q+D  +   E  +D++VSNPPYI+++    +
Sbjct: 148 EAVDISQTALKVAKHNALMNNAEIRF--IQADMCNYKTEQKYDLMVSNPPYIKNLERIEM 205

Query: 184 GLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V + +P ++L    +  L  Y  +AD  ++ LN+ G    EI  +   + + +  S+
Sbjct: 206 HKNVLEHEPHLALFVPDERPLLFYEALADLAAKSLNEQGYLFFEINEHLAQETIDMLASK 265

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               +   KD  G DR+L+
Sbjct: 266 SFKTIELRKDMQGKDRMLM 284


>gi|149925824|ref|ZP_01914088.1| modification methylase, HemK family protein [Limnobacter sp.
           MED105]
 gi|149825941|gb|EDM85149.1| modification methylase, HemK family protein [Limnobacter sp.
           MED105]
          Length = 307

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 121/261 (46%), Gaps = 10/261 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            +  +TG     ++   +  L   Q     +   +  + E I  ++  ++FY+    +  
Sbjct: 30  LMTHITGFDRVGLVTKGNRELPMDQLSAFKSLAAKRQQGEPIAYLVQQKEFYSRPFFVDP 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV+ AL F   +  +  + R+LD+G G+GA+ ++L  E+P  +    DI
Sbjct: 90  RVLIPRPETEELVEHALGFLQSKSTENLLTRVLDIGCGSGAIAVSLALENPILEVTATDI 149

Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCL 183
           S  AL +A+ NA   G    RF  LQSD F ++        FD+I SNPPYIE       
Sbjct: 150 SADALWVAQFNANELGAKNIRF--LQSDLFENLLNQTPPLAFDLICSNPPYIELGDEHLS 207

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P+ +L  G DGL  YR IA      L   G   VE G+ Q+  V  +F    
Sbjct: 208 QGDLR-FEPQQALTDGGDGLHFYREIAQHSPSLLRAGGGVLVEHGHTQQEAVKALFSKAP 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V    D  G  R  +F R
Sbjct: 267 YVDVQGLPDLAGTPR-FVFAR 286


>gi|242280070|ref|YP_002992199.1| modification methylase, HemK family [Desulfovibrio salexigens DSM
           2638]
 gi|242122964|gb|ACS80660.1| modification methylase, HemK family [Desulfovibrio salexigens DSM
           2638]
          Length = 287

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 126/256 (49%), Gaps = 8/256 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           F  +V  L+  Q+I++ +S +D  +       + R    E    ILG ++F+     +  
Sbjct: 32  FAEKVFDLNRVQLIMELESSVDTEKAAEFDALVKRRASGEPAAYILGVKEFFGFDFKVGP 91

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE +V+             D     D GTG+G + + + K  P  +G+ +D+
Sbjct: 92  GVLIPRPETEEIVEKVQQL----FSTEDEFLFADFGTGSGILAVTVAKLFPKARGIALDL 147

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL IA+ NA  +GVSER   +++D+   +  +  FD+I++NPPY+    +D +  EV
Sbjct: 148 SPAALAIAQDNARLHGVSERVLFVRADFNEPLLADAKFDLILANPPYLCEAELDEISYEV 207

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-- 245
            +F+P  +L  G DG    +  A  ++  L + G   +EIGY Q      IF+S   F  
Sbjct: 208 AEFEPVSALVSGPDGDEDIKGSAPRIASALKQGGTVFMEIGYLQGKVAHSIFDSCSEFSG 267

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD   +DRV++
Sbjct: 268 CVEVQKDLSEHDRVVV 283


>gi|187476812|ref|YP_784836.1| protein methyltransferase [Bordetella avium 197N]
 gi|115421398|emb|CAJ47903.1| protein methyltransferase [Bordetella avium 197N]
          Length = 269

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 9/218 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ++G R+F      ++     PRP+TE LV++ALAF    ++ R   R+LD
Sbjct: 54  RRLAGEPMAYVIGEREFMGHVFQVTPAVLIPRPDTETLVEAALAF----LKTRPQARVLD 109

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           LGTG+GA+ +++    P  +    D+S +AL +A+ NA   GV  R    Q  WF+++  
Sbjct: 110 LGTGSGAIAVSIALACPQAEVSATDLSAEALAVARGNADRLGV--RLHLAQGSWFAALDA 167

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +  FD+IVSNPPYI          ++R F+PR +L  G DGL+    IA      L   G
Sbjct: 168 DARFDLIVSNPPYIHRNDAHLAQGDLR-FEPRGALTDGADGLAALAEIALEAPGRLLPGG 226

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
              +E G++Q   V  + +   L  V +  D  G +R+
Sbjct: 227 ALWMEHGWDQAAAVRALLQEAGLRDVASQPDLAGIERI 264


>gi|171911848|ref|ZP_02927318.1| modification methylase, HemK family protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 307

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 4/211 (1%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG  +F++           PRPETE LV   +    P+ E     R+LD+GTG+
Sbjct: 69  EPLQHLLGTVEFHDSEFVCDHRALIPRPETEHLVHLLVDKWFPKSEPPH--RLLDVGTGS 126

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDV 167
           G + L+L K  P  + + VDIS  ALE+A+ NA   G++ ++   ++SD     +G FD+
Sbjct: 127 GCIGLSLAKAWPAAEVLLVDISEDALELARLNAGRLGLNGQKVRLVRSDLLEHADGAFDL 186

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+N PYI +  +  +  EV   DP ++LDGG DGL     + +    HL ++GL ++E+
Sbjct: 187 IVANLPYIPTAELKEISREVA-HDPNLALDGGPDGLVIVDRLLETAPEHLTENGLLALEL 245

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            Y+Q   V    +      + + +D  G  R
Sbjct: 246 HYDQASAVSERLQKLGFQAIQSAEDLAGIPR 276


>gi|217969846|ref|YP_002355080.1| modification methylase, HemK family [Thauera sp. MZ1T]
 gi|217507173|gb|ACK54184.1| modification methylase, HemK family [Thauera sp. MZ1T]
          Length = 289

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V    + +++  P+  L           + R      +  + G R+FY    
Sbjct: 28  DARVLLRHVLQCPAARLVAWPEQKLAAEDWAEYRALVERRAAGVPVAYLTGTREFYGREF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV+ ALA        R  +R+LDLGTG+GA+ + L  E    + V
Sbjct: 88  LVTPAVLIPRPETELLVELALA----HFPGRRGLRVLDLGTGSGALAVTLALELEAAEVV 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            +D S +AL +A +NA   G S  F  +QSDWF ++ +  F++IVSNPPY+ +       
Sbjct: 144 ALDRSREALWVAMANAARLGASVSF--VQSDWFGALGDEHFELIVSNPPYVAAGDPHLEQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+PR +L  G  GL     I  G    L   G   +E GY+Q      +      
Sbjct: 202 GDVR-FEPRGALAAGPQGLDDLAEIVAGAPARLVDGGWLFLEHGYDQAASARGLLADAGF 260

Query: 245 FLVNAFKDYGGNDRV 259
             + ++ D  G +RV
Sbjct: 261 AAIASWADLAGIERV 275


>gi|303327274|ref|ZP_07357716.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. 3_1_syn3]
 gi|302863262|gb|EFL86194.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. 3_1_syn3]
          Length = 283

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 7/251 (2%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V GL     ++  +  L   Q   L     R    E + +ILG R+F+     ++ DT  
Sbjct: 33  VLGLDRLHCVLAAERELTPDQAGTLEALTARRATGEPLAQILGGREFFGRTFLVTPDTLI 92

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETELLV++AL   LP  +    +R  DLG G+G + + L  E P + G+ +++S  A
Sbjct: 93  PRPETELLVETALEL-LPAGQP---LRFADLGAGSGCIGVTLCLERPRWCGLLLELSAPA 148

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           LE+A++NA   G + R D L++D        G  D++VSNPPYI       +  EV  F+
Sbjct: 149 LEVARANAARLGAATRLDALRADLRAIPLAGGSCDLLVSNPPYIADAERGQVMDEVLRFE 208

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAF 250
           P  +L     GL+H R +    +R L   GL  +E G +Q   V  +  +   F+ +   
Sbjct: 209 PHSALFSPEAGLAHLRAVIAQAARLLRPGGLLLLEHGADQGKAVRDLLSAGDAFVGIATR 268

Query: 251 KDYGGNDRVLL 261
           +D  G +R  L
Sbjct: 269 RDLAGLERCAL 279


>gi|228994047|ref|ZP_04153948.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
 gi|228765695|gb|EEM14348.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
          Length = 283

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 5/254 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    + + Q+   TN I + +    +  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE L+   L   + R+  +  + I D+GTG+GA+ + L  E+       VDI+
Sbjct: 88  VLIPRPETEELIVGVLD-RIQRMFGKQELHIADIGTGSGAISITLALENQNLHMYTVDIA 146

Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +++E+AK NA   G +  F    L S ++ + + L DV+VSNPPYI       L   V+
Sbjct: 147 QESIEVAKENAKALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
           + +P+ +L GG DGL  YR   + +   L +  + + E+G  Q  DV R+ +       V
Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFPHAHV 265

Query: 248 NAFKDYGGNDRVLL 261
               D  G DR++ 
Sbjct: 266 EVVFDINGKDRMVF 279


>gi|87198312|ref|YP_495569.1| HemK family modification methylase [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87133993|gb|ABD24735.1| [protein release factor]-glutamine N5-methyltransferase
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 291

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 10/226 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L HE +  I+G  +FY + L ++     PR +TE LV++A      R   R   RI
Sbjct: 60  VERRLGHEPVAYIIGSAEFYGLDLAVTPAVLIPRGDTETLVEAAREAFAWRAAPR---RI 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWF 158
           LDLGTG+GA+ LA L   P  +GV ++ S +AL +A++N   +  + RF   D  Q DW 
Sbjct: 117 LDLGTGSGALLLAALSLWPQAEGVAIERSPEALAVARANGARHAPAARFLPGDWTQPDWS 176

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           + + G FD+I+SNPPY+E      L L VR  +P  +L  G +GL  YR +   +   L 
Sbjct: 177 ADL-GTFDLILSNPPYVEDEA--DLALSVRAHEPSAALFSGPEGLDDYRVLVPQLPGLLT 233

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             G+  VEIG+ Q   V  I  +  +      +D    DR +   +
Sbjct: 234 DQGIAIVEIGWQQGQAVSAIARASGM-TARIHRDLANRDRAVEMAK 278


>gi|94312134|ref|YP_585344.1| HemK family modification methylase [Cupriavidus metallidurans CH34]
 gi|93355986|gb|ABF10075.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Cupriavidus metallidurans CH34]
          Length = 310

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  VTG +  Q+I   +  LD  +R      + R L  E +  ++G R+F+    
Sbjct: 54  EARMLLSHVTGFTRTQLITRDNDHLDAPKRDAFATLLARRLTGEPMAYLIGEREFFGRTF 113

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TE+  +++LA    RI      R+LD+GTG+G + + + +E P  +  
Sbjct: 114 RVTPDVLIPRPDTEVAAEASLA----RIADVKAPRVLDMGTGSGILAVTIARERPDAEVW 169

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCL 183
             DIS  AL +A+ NA     +E    L SDW+  +  GL F++IVSNPPYI       +
Sbjct: 170 ATDISRGALMVAEDNARAL-QAENIRFLVSDWYEDLPVGLCFNLIVSNPPYIAEGDPHLV 228

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGLS   TI  G +  L   G   +E GY+Q   +        
Sbjct: 229 EGDLR-FEPIDALTDHEDGLSDLATIVAGATARLLPGGWLLMEHGYDQGAAMRAQLAEAG 287

Query: 244 LFLVNAFKDYGGNDR 258
              V   +D  G +R
Sbjct: 288 FVEVFTTRDLAGLER 302


>gi|251771815|gb|EES52390.1| modification methylase, HemK family [Leptospirillum
           ferrodiazotrophum]
          Length = 308

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 3/189 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E  H I G   F      L+     PRPETE LV+ AL  +    + R+ +RI
Sbjct: 81  INRRAAREPHHLITGEITFCGHSFFLAPGVLIPRPETEQLVELALRHTA-ASKGREPLRI 139

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159
           LDLG+G+G + L+ L E P  + V V+    AL     N   + + +R   ++ DW    
Sbjct: 140 LDLGSGSGVIALSFLLERPEARAVAVEREPLALATLLENRRRHRLVDRLAVVRGDWEEMF 199

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
               +FD I+SNPPYI +  +  L  EVR ++P  +LDGG DGL  YR I     R + +
Sbjct: 200 GERPVFDCILSNPPYIPTDTIPALEPEVRAYEPASALDGGADGLDPYRKILPRAFRLIRE 259

Query: 220 DGLCSVEIG 228
            GL ++EIG
Sbjct: 260 GGLIALEIG 268


>gi|194336187|ref|YP_002017981.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308664|gb|ACF43364.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pelodictyon phaeoclathratiforme BU-1]
          Length = 299

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 8/217 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTG 109
           +  + G + FY ++  +      PRPETELLV+  L A  +         +ILD+GTG+G
Sbjct: 79  VQYLTGEQYFYGLQFFVDERVLIPRPETELLVEQVLDALGMTGRGGSRKAKILDIGTGSG 138

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EG 163
            + + L K  P      +D S +ALE+A+ N + +GV  +   + +D+F         E 
Sbjct: 139 CIAVTLAKLFPELTVSAIDCSLEALEVARINVLKHGVESQVSCIHADFFDEFFATRLPET 198

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +D+IVSNPPYI     + L  EV+ ++P+I+L     G+  Y  IA   ++ L   G  
Sbjct: 199 SYDLIVSNPPYIPVCEWEGLQREVKQYEPKIALTTP-QGVECYHAIAAQAAKLLVPGGRL 257

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             E+  +    V  + E+     +   KDY G DR+L
Sbjct: 258 CFELHADAAAVVSELLEANGFGGITVTKDYSGLDRIL 294


>gi|313622329|gb|EFR92816.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria innocua FSL J1-023]
          Length = 283

 Score =  106 bits (264), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV +A AF    ++K  +  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVATAEAF----LKKHPLRSLLDVCTGSGIIAIALKKAFPDITVTASDISAAALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK NA+      RF   D L+S  F      FD+IV+NPPYI       +   V   +P
Sbjct: 150 IAKKNALLLNADVRFIETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|220915514|ref|YP_002490818.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953368|gb|ACL63752.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 286

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 121/259 (46%), Gaps = 24/259 (9%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H+  C        ++ +D D  L + +     + + R  + E    + G RDFY     
Sbjct: 37  AHALRC-----ERMRLYLDFDKPLGEPELAAFRDLVRRRAEGEPTAYLTGRRDFYGRPFL 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122
           + +    PRPETEL++++A          RD +      LDL TG+GA+ ++L  E P  
Sbjct: 92  VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERPGA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           + V  D+S  AL +A  NA   G +   D  Q D ++ +     FDVIVSNPPY+    +
Sbjct: 142 RVVATDLSADALAVAAENARALGAA--VDLRQGDLWAPLRAGERFDVIVSNPPYVPRGEL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR  +PR++LDGG DGLS  R I +G    L   G   +E+       + R+  
Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLSLLRRIVEGAPARLAPGGTLVLEMHEGHLELLPRLCR 258

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                   A +D  G  R+
Sbjct: 259 DAGFAQAEARRDLAGLPRL 277


>gi|290892705|ref|ZP_06555697.1| modification methylase [Listeria monocytogenes FSL J2-071]
 gi|290557765|gb|EFD91287.1| modification methylase [Listeria monocytogenes FSL J2-071]
          Length = 283

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|229588284|ref|YP_002870403.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
 gi|229360150|emb|CAY47007.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
          Length = 276

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 123/243 (50%), Gaps = 14/243 (5%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+ ++           + R    E +  ILG + F+ + L ++  T  PRP+TELLV++A
Sbjct: 42  PEKIVSSEDALTFAGYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPRPDTELLVEAA 101

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-- 143
           L             ++LDLGTG+GA+ LAL  E P ++   VD   +A+ +A+ N     
Sbjct: 102 LELL-----PATPAKVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVALAERNRQRLH 156

Query: 144 -NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N V+     L S WFS++ G  +D+I+SNPPYI +     +  +VR F+P  +L  G D
Sbjct: 157 LNNVT----VLNSHWFSALPGHTYDLIISNPPYIAANDPHLVAGDVR-FEPASALVAGHD 211

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GL   R I      HLN  G   +E GY+Q   V  +  S     V++  D GG++R+ L
Sbjct: 212 GLDDLRLIIKEAPAHLNAGGRLLLEHGYDQAPAVRDLLLSEGFEEVHSRIDLGGHERITL 271

Query: 262 FCR 264
             R
Sbjct: 272 GRR 274


>gi|225386764|ref|ZP_03756528.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme
           DSM 15981]
 gi|225047126|gb|EEG57372.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme
           DSM 15981]
          Length = 342

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 120/270 (44%), Gaps = 56/270 (20%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R  +   + ++LG ++F  +   ++     PR +TE LV+  L       +KR  + +
Sbjct: 66  ITRRAERIPLQQLLGVQEFMGLEFFVNEHVLIPRQDTETLVELVL-----EEQKRRDLDV 120

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT--NGVSERFDTLQSDWFS 159
           LD+ TG+G + ++L +   +     +D+S +AL++A+ NA          F  +QSD F+
Sbjct: 121 LDVCTGSGCIAVSLARLGRYASVTALDVSAEALKVAEKNAAALLGEYDGDFRLVQSDMFA 180

Query: 160 SVE--GL-----------------------------------------------FDVIVS 170
            +E  GL                                               FD++VS
Sbjct: 181 GLETKGLQEQKPVEPDTSREQTSGEPDAWQGRTAVKPAVAGELPCRLCVPCTLRFDILVS 240

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S +++ L  EVRD +PR++LDG  DGL  YR +A    R L   G    EIG++
Sbjct: 241 NPPYIPSQVIEGLEPEVRDHEPRLALDGSPDGLKFYRILASEGKRFLRPGGAVYFEIGWD 300

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V  + E      +   KD  G DRV+
Sbjct: 301 QAQAVSALLEQEGFARIRTVKDMAGMDRVV 330


>gi|239828603|ref|YP_002951227.1| modification methylase, HemK family [Geobacillus sp. WCH70]
 gi|239808896|gb|ACS25961.1| modification methylase, HemK family [Geobacillus sp. WCH70]
          Length = 288

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 17/266 (6%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDD--RQRFFLTNAIVRS--LKHESIHRILGWRDF 60
           R +   LC    ++  Q+       +D+  RQ F    A VR    +H  +  ++G   F
Sbjct: 24  RAAELLLCHHLQITRAQLFARLRDPIDENVRQSF---EADVRKHVYEHVPVQHLIGLEQF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++ +   PRPETE LV+  L            + ++D+GTG+GA+ + L  E+ 
Sbjct: 81  YGRPFLVNRNVLIPRPETEELVEGVLTRITQLFPGNKTIDVVDVGTGSGAIAITLALENK 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIES 177
             +   +DI+ +ALE+AK NA   G    F   D LQ    +S +   DV+VSNPPYI  
Sbjct: 141 SLRVAAIDIAPEALEVAKRNAERLGADVAFICGDLLQPLVEASRK--VDVVVSNPPYIPE 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L   V+D++P  +L GG DGL  YR  A  +   L +  L + E+G  Q   V  
Sbjct: 199 NEIASLSPVVKDYEPLRALSGGKDGLDFYRRFARELPFVLKERALVAFEVGAGQGEAVAA 258

Query: 238 IFESRKLFL---VNAFKDYGGNDRVL 260
           I   R+ F    V    D  G DR++
Sbjct: 259 IL--RQTFPQAEVEVVFDINGKDRMV 282


>gi|226225090|ref|YP_002759197.1| protoporphyrinogen oxidase [Listeria monocytogenes Clip81459]
 gi|225877552|emb|CAS06266.1| Putative protoporphyrinogen oxidase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 283

 Score =  106 bits (264), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFEKDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|94987068|ref|YP_595001.1| protoporphyrinogen oxidase HemK [Lawsonia intracellularis
           PHE/MN1-00]
 gi|3599925|gb|AAC36501.1| orfx; similar to Escherichia coli possible protoporphyrinogen
           oxidase (hemK) [Lawsonia intracellularis]
 gi|94731317|emb|CAJ54680.1| similar to Escherichia coli possible protoporphyrinogen oxidase
           (hemK) [Lawsonia intracellularis PHE/MN1-00]
          Length = 293

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 14/260 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  V  ++  Q+I+ P   +       L + ++R L  E I  + G ++F++    ++  
Sbjct: 31  LSHVLNITRLQIIMTPFEPIPTNSYSTLNDIMLRRLHGEPIAYLTGKKEFFSREFKVTQA 90

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PRPETELL++    F L  I     +   DLGTG+G + + L  E   + G+  DIS
Sbjct: 91  TLIPRPETELLIE----FVLNHINPTQQIYFADLGTGSGCIAITLAAERKNWLGIATDIS 146

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +AL+IAK N++ N    +   LQSD+     +    D+ +SNPPYI    +  L  EV 
Sbjct: 147 SEALKIAKLNSLKNNTHSQLQFLQSDFTQPLCLPSSLDLYISNPPYISENELTSLPHEVI 206

Query: 189 DFDPRISLDGG-------IDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            F+P+I+L          I+ + H Y+ I       L   G+  +E G  Q   ++ + +
Sbjct: 207 SFEPKIALTPHKCIHLDEINTVLHCYKKIITQAEISLKPGGIIILEHGATQAEAILLLLK 266

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V +  D    +R +
Sbjct: 267 NNIWTNVISHTDLTNKNRFI 286


>gi|116072663|ref|ZP_01469929.1| Modification methylase HemK [Synechococcus sp. BL107]
 gi|116064550|gb|EAU70310.1| Modification methylase HemK [Synechococcus sp. BL107]
          Length = 302

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 10/218 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           +S+  + +  +  WRD     L +SS    PR ETELLVD ALAF+  R  +       D
Sbjct: 80  QSMPLQHLVGVCPWRDLL---LEVSSAALIPRQETELLVDLALAFAGGRPPRS----WAD 132

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           LGTG GA+ ++L +  P  +G  VD+S  AL +A+ N      ++     Q  W+  +  
Sbjct: 133 LGTGCGAIAVSLCRAWPDAEGHAVDLSIDALALAEKNLKALAPAQSCRLQQGSWWVPLRA 192

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  +++VSNPPYI S ++  L   VR+ +P ++L GG DGL   R++     R L   
Sbjct: 193 SWGQLEIVVSNPPYIPSPLLGELAPVVREHEPHVALVGGEDGLEAIRSLLKDAPRALAPG 252

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G+  +E  ++Q   V  +     L  V+A  D  G  R
Sbjct: 253 GVLFLEHHHDQSESVQDLMRRVGLVNVSAANDLEGVAR 290


>gi|328957994|ref|YP_004375380.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4]
 gi|328674318|gb|AEB30364.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4]
          Length = 282

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 8/212 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I ++LG+  FY+ +  ++ DT  PRPETE +VD  L  S    E++  V  LD+GTGTG 
Sbjct: 72  IQQLLGYCWFYDRKFKVTKDTLIPRPETEEIVDIFLKSS--STEQKKTV--LDIGTGTGI 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + + + KE P F+    DIS KAL++A+ NA       RF  L+ D    V+   FDVI+
Sbjct: 128 IGITIKKERPLFEVTATDISSKALKVAQENATALEADVRF--LEGDLTDPVKTESFDVIL 185

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI +  +  +   V  ++P ++L    +GL+ Y+ +A  +   LN  G   +EIG+
Sbjct: 186 SNPPYISNDEISYMDESVLHYEPHLALFAENNGLAMYQRLAKELPTILNPGGEVFLEIGF 245

Query: 230 NQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
            Q   V  +F E+  L  V   KD  GNDR++
Sbjct: 246 KQGKKVQELFQEAFPLAEVTIEKDMSGNDRLI 277


>gi|47096964|ref|ZP_00234540.1| modification methylase, HemK family [Listeria monocytogenes str.
           1/2a F6854]
 gi|254828118|ref|ZP_05232805.1| modification methylase [Listeria monocytogenes FSL N3-165]
 gi|254900319|ref|ZP_05260243.1| hypothetical protein LmonJ_10912 [Listeria monocytogenes J0161]
 gi|254913442|ref|ZP_05263454.1| modification methylase [Listeria monocytogenes J2818]
 gi|254937823|ref|ZP_05269520.1| modification methylase [Listeria monocytogenes F6900]
 gi|284802980|ref|YP_003414845.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578]
 gi|284996121|ref|YP_003417889.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923]
 gi|47014674|gb|EAL05631.1| modification methylase, HemK family [Listeria monocytogenes str.
           1/2a F6854]
 gi|258600503|gb|EEW13828.1| modification methylase [Listeria monocytogenes FSL N3-165]
 gi|258610427|gb|EEW23035.1| modification methylase [Listeria monocytogenes F6900]
 gi|284058542|gb|ADB69483.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578]
 gi|284061588|gb|ADB72527.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923]
 gi|293591449|gb|EFF99783.1| modification methylase [Listeria monocytogenes J2818]
          Length = 283

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A+ NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|300853433|ref|YP_003778417.1| putative modification methylase [Clostridium ljungdahlii DSM 13528]
 gi|300433548|gb|ADK13315.1| predicted modification methylase [Clostridium ljungdahlii DSM
           13528]
          Length = 287

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 13/216 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  +F  +   +      PRP+TE LV+ AL     +I+  +   I D+  GTG 
Sbjct: 75  VKYILGHCEFMGIDFIVKPGVLIPRPDTETLVEQALI----QIKHNNFHNICDVCCGTGI 130

Query: 111 VCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGL 164
           + +++ K     +G+ V   DIS  A E+   N     + E+   ++S   +++   E  
Sbjct: 131 IGISIAK---LIEGMNVKCCDISSTACEVTAENIRRFSLEEKVQVVKSNLMEYYIQNEVK 187

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F +IVSNPPYI+   +  L  +V++++PR +L GG DGL  YR I     R L  +G+  
Sbjct: 188 FHMIVSNPPYIKESSIPTLMEDVKNYEPREALSGGKDGLEFYRKITKESLRVLESNGIIM 247

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            EIGY+Q+  V  I        +   KD  G DRV+
Sbjct: 248 FEIGYDQRESVSDILAQNGFKNIMCIKDLAGKDRVI 283


>gi|262038063|ref|ZP_06011468.1| methyltransferase [Leptotrichia goodfellowii F0264]
 gi|261747883|gb|EEY35317.1| methyltransferase [Leptotrichia goodfellowii F0264]
          Length = 367

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 112/212 (52%), Gaps = 6/212 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +L  ++FY  +  +++    PR +TE+LV+ A+     R EK +  +ILD+GTG+GA
Sbjct: 153 VQYLLNEQEFYGRKFYVNTGVLIPRQDTEVLVEEAI--KTLRSEKTETPKILDIGTGSGA 210

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVE-GLFDVI 168
           + + L  E P  K +G DIS KALEI++ N ++ N  + +F   +SD F ++E   FD+I
Sbjct: 211 IGITLALEIPDSKIMGTDISDKALEISEKNKSLLNAENIKF--FKSDLFENIEYKKFDMI 268

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +SNPPYI S     +  +    +P  +L    +GL  YR I+     +L   G    E G
Sbjct: 269 ISNPPYIASDETKVMSEDTLLHEPDEALFAEDEGLYFYREISFQGKEYLRNGGYMLFETG 328

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Y Q   V +I E      VN  KD     RV+
Sbjct: 329 YKQAETVKKIMEITGYKNVNIIKDMQNIGRVV 360


>gi|16804580|ref|NP_466065.1| hypothetical protein lmo2542 [Listeria monocytogenes EGD-e]
 gi|224503218|ref|ZP_03671525.1| hypothetical protein LmonFR_11988 [Listeria monocytogenes FSL
           R2-561]
 gi|254831035|ref|ZP_05235690.1| hypothetical protein Lmon1_06733 [Listeria monocytogenes 10403S]
 gi|16412030|emb|CAD00620.1| lmo2542 [Listeria monocytogenes EGD-e]
          Length = 283

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A+ NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|121603685|ref|YP_981014.1| HemK family modification methylase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592654|gb|ABM36093.1| [protein release factor]-glutamine N5-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 283

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 18/224 (8%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRI 101
           +R    E +  I+G ++F+ + L + +    PRP+TE LV+ +LA    P +     +++
Sbjct: 62  LRRASGEPLAYIVGGKEFFGLALQVDARVLVPRPDTETLVEWSLAVLKAPGLMPP--LKV 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQ 154
           LDLGTG+GA+ LA+       K  G       VD S  AL++A+ NA   G++  F  ++
Sbjct: 120 LDLGTGSGAIALAIAHS---LKATGREAQVTAVDASADALDVARENARRLGLAVAF--IE 174

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           S W   V G F +I SNPPYI S       L     +P  +L  G+DGL   R I     
Sbjct: 175 SSWLQGVNGRFHLIASNPPYIASADPHLAALA---HEPLQALTAGMDGLDDIRDIIQQAP 231

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            HL   G   +E GY+Q   V  +   R    V   +D  G +R
Sbjct: 232 DHLLPGGWLLLEHGYDQAGRVRELLVQRGFLQVQGRQDLAGIER 275


>gi|197120813|ref|YP_002132764.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaeromyxobacter sp. K]
 gi|196170662|gb|ACG71635.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaeromyxobacter sp. K]
          Length = 286

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 120/259 (46%), Gaps = 24/259 (9%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H+  C        ++ +D D  L + +       + R  + E    + G RDFY     
Sbjct: 37  AHALRC-----ERMRLYLDFDRPLGEPELAAFRELVRRRAEGEPTAYLTGRRDFYGRPFL 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122
           + +    PRPETEL++++A          RD +      LDL TG+GA+ ++L  E P  
Sbjct: 92  VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERPGA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEG-LFDVIVSNPPYIESVIV 180
           + V  D+S  AL +A  NA   G +   D  Q D W    EG  FDVIVSNPPY+    +
Sbjct: 142 RVVATDLSADALAVAAENARALGAA--VDLRQGDLWAPLREGERFDVIVSNPPYVPRGEL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR  +PR++LDGG DGLS  R I +G    L   G   +E+       + R+  
Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLSLLRRIVEGAPTRLVPGGTLVLEMHEGHLELLPRLCR 258

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                   A +D  G  R+
Sbjct: 259 DAGFERAEARRDLAGLPRL 277


>gi|312887827|ref|ZP_07747414.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mucilaginibacter paludis DSM 18603]
 gi|311299646|gb|EFQ76728.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mucilaginibacter paludis DSM 18603]
          Length = 290

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           VTGLS  Q+     + +   Q   LT+   +      +  ILG  +FY +   ++     
Sbjct: 40  VTGLSKAQLRAFTGNEITTPQAEKLTDIANQLQTGIPLQYILGHTEFYGLNFQVNPSVLI 99

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE LV+  +  +  R ++     ILD+GTG+G + + L K  P  +   +DIS  A
Sbjct: 100 PRPETEELVEWIIQAAQERHQQE---AILDIGTGSGCIPVKLKKHLPDAEVSAIDISPAA 156

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           L+ AK NA  NGV   F  +++D  + VE     + ++VSNPPY+       + + V + 
Sbjct: 157 LQTAKQNATLNGVDVAF--IEADILNPVEISFPQYSILVSNPPYVTEREKAHMHVNVLNN 214

Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +P ++L     D L  YR IAD   +HL  +GL   EI  N    ++ + + + L  +  
Sbjct: 215 EPHLALFVSDHDPLVFYRAIADFALQHLTSNGLLFFEINENLGQQMIDLLQDKNLKNIEL 274

Query: 250 FKDYGGNDRVL 260
            +D  G DR++
Sbjct: 275 RQDMRGKDRMI 285


>gi|217963354|ref|YP_002349032.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes HCC23]
 gi|217332624|gb|ACK38418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes HCC23]
 gi|307572069|emb|CAR85248.1| modification methylase, HemK family [Listeria monocytogenes L99]
          Length = 283

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 106/228 (46%), Gaps = 9/228 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE
Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFE 255


>gi|255525834|ref|ZP_05392763.1| modification methylase, HemK family [Clostridium carboxidivorans
           P7]
 gi|255510477|gb|EET86788.1| modification methylase, HemK family [Clostridium carboxidivorans
           P7]
          Length = 290

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 7/213 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG  +F  +   +      PRP+TE+LV+ A+      I+++ +    D+  G+GA
Sbjct: 75  IKYILGECEFMGLDFYIKEGVLIPRPDTEVLVELAIKC----IKEQKLKNACDVCCGSGA 130

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDV 167
           + +++ K     K    DIS  A E+   N     +  + + ++SD   +F + +  FD+
Sbjct: 131 IGISIAKFVEDIKVKCSDISNIAYEVTLENIKRFELEHKVEVIKSDLLNYFINNKEKFDI 190

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I+SNPPYI   ++  L  +V++++P  +L GG DGL  YR I     + LN +G    EI
Sbjct: 191 IISNPPYIREDVIPTLMEDVKNYEPYEALSGGQDGLDFYRKITLQSLKLLNNNGFLLFEI 250

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           GY+QK  V  I E      ++  KD  G DRV+
Sbjct: 251 GYDQKDSVSSILEQNGFTDISCIKDLAGKDRVI 283


>gi|149197696|ref|ZP_01874746.1| Methyltransferase [Lentisphaera araneosa HTCC2155]
 gi|149139266|gb|EDM27669.1| Methyltransferase [Lentisphaera araneosa HTCC2155]
          Length = 282

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 10/237 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L + +   +   + R  +HE +  I G  +FY + +++      PRPETE LVD A 
Sbjct: 47  DRPLSESELSSIREKLQRCARHEPVQYICGSTNFYGLEISVGPGVLIPRPETECLVDLAT 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNG 145
                    ++  ++LDL TG+G + +A+ ++       V  DI  KAL  A+ N +T  
Sbjct: 107 KHI------KEGQKLLDLCTGSGCIPIAIQEQKKQSLSIVACDIEEKALNYAQEN-ITQN 159

Query: 146 VSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            ++  + LQ D F+ +     FD+I SNPPY+       +G +V   +P  +L    DG+
Sbjct: 160 KTQNIELLQCDLFAKIANDIKFDLITSNPPYVSESERPEMGKDVLKHEPPSALFADHDGM 219

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +    IA    +++       +EIG +Q    + +FE+     V   KDY   DR+L
Sbjct: 220 AIIERIAQEAPQYMEPKAYILIEIGASQGSRCLELFEASNYRNVEVVKDYSSRDRIL 276


>gi|307155020|ref|YP_003890404.1| modification methylase, HemK family [Cyanothece sp. PCC 7822]
 gi|306985248|gb|ADN17129.1| modification methylase, HemK family [Cyanothece sp. PCC 7822]
          Length = 299

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 10/214 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114
           WR F   ++ +S D   PRPETE ++D  L  ++P     D+     +DLGTG+GA+ L 
Sbjct: 89  WRKF---KIKVSPDVLIPRPETEYIIDIVLK-AIPESPLFDIASGNWVDLGTGSGAIALG 144

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L           VD S  AL+IA+ NA+  G +ER    Q  W++ +E   G  + +VSN
Sbjct: 145 LADILTNATIYAVDRSRGALDIAEDNAIEWGFAERIHFKQGFWWTPLEFLRGQVNGMVSN 204

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + ++  L  EV   +P I+LDGG  GL   R + +    +L   G+  +E+   Q
Sbjct: 205 PPYIPTELIATLDPEVAYHEPHIALDGGEGGLESIRYLIESSPPYLRSGGIWLIEMMAGQ 264

Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
              V ++   +  +  +  F D+ G +R  L  R
Sbjct: 265 AEQVAQLLACQGSYQNIQIFPDFAGIERFALAYR 298


>gi|167721409|ref|ZP_02404645.1| protein methyltransferase HemK [Burkholderia pseudomallei DM98]
          Length = 247

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 15/247 (6%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           Q+I   D  LD   R        R    E I ++ G R+F+ +   ++ D   PRPETEL
Sbjct: 1   QLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETEL 60

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV++AL      I+      +LDLGTG+GA+ +++  E P  +   ++ S  AL++A+ N
Sbjct: 61  LVETALDA----IDGIASPCVLDLGTGSGAIAVSIASERPDARVWALERSVAALDVARRN 116

Query: 141 A------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A         G   RF  L+SDW+++++ GL F V+VSNPPYI          ++R F+P
Sbjct: 117 ARKLLDPARAGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEP 173

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           R +L    DGL+  RTI  G    +   G   +E GY+Q   V  + ++     V +  D
Sbjct: 174 RGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRALLDAAGFADVESRAD 233

Query: 253 YGGNDRV 259
               +R 
Sbjct: 234 LASIERA 240


>gi|254993430|ref|ZP_05275620.1| HemK family modification methylase [Listeria monocytogenes FSL
           J2-064]
          Length = 283

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|285017272|ref|YP_003374983.1| methyltransferase hemk protein [Xanthomonas albilineans GPE PC73]
 gi|283472490|emb|CBA14995.1| probable methyltransferase hemk protein [Xanthomonas albilineans]
          Length = 277

 Score =  105 bits (263), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 7/223 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  + G R F+ + L +   T  PR +TE LV+     +L R++ +   R+
Sbjct: 57  VARRAQGEPVAYLTGRRGFWTLDLAVGPATLIPRADTERLVE----LALERLDMQPGRRV 112

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LAL  E P  + +  D+S  AL +A++N + +G+          W   +
Sbjct: 113 ADLGTGSGAIALALASERPRAQVLATDLSAAALAVAEANMLAHGL-HNVAFAHGAWLVPL 171

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G+DGL   R I  G   HL   
Sbjct: 172 AGQRFDLIASNPPYIAAGDPHLTQGDLR-YEPLSALTSGVDGLDDIRQIVAGAPAHLRAG 230

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           G   +E G++Q   V  +  + +   V  ++D    DRV L C
Sbjct: 231 GWLLLEHGWDQGNAVRALLTAARFIAVETYQDLELRDRVTLGC 273


>gi|256421259|ref|YP_003121912.1| modification methylase, HemK family [Chitinophaga pinensis DSM
           2588]
 gi|256036167|gb|ACU59711.1| modification methylase, HemK family [Chitinophaga pinensis DSM
           2588]
          Length = 286

 Score =  105 bits (263), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 123/265 (46%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +H  +  VTG+S    IV  +  L   Q   LT A+   L HE +  ++G   FY
Sbjct: 22  EAANIAHIVMEYVTGMSKMDRIVYKERELTTEQTSQLTAAVKALLAHEPVQYVIGSSWFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETE LV+  +     R  +    +ILD+GTG+GA+ LA+ KE P 
Sbjct: 82  GMELLVNPHVLIPRPETEELVEWIVQDI--RTAQLSQPQILDIGTGSGAIPLAIKKELPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                VD+S  AL+ AK NAV   +   F   D L    ++ +  +FD+IVSNPPYI   
Sbjct: 140 AHVQAVDVSKGALQTAKDNAVKQQLDVTFELVDILNKTAWTHLP-MFDIIVSNPPYICQR 198

Query: 179 IVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  +V  ++P ++L   D   D L  YR I       L   G    EI      + 
Sbjct: 199 ESADMQEQVVSYEPSLALFVPDD--DALLFYREIGWMGKEKLKNGGALYFEINEAFGTET 256

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260
             + E      V   KD  G DR++
Sbjct: 257 AALLEGMGYLEVEIKKDLFGKDRMV 281


>gi|163755416|ref|ZP_02162536.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1]
 gi|161324836|gb|EDP96165.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1]
          Length = 289

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 11/253 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            L    + +DP+  +   Q   +  A+      + I  ILG   F+ +   ++  T  PR
Sbjct: 36  NLERFTLALDPEFTISKEQETPMFQALSELKLEKPIQHILGKAHFFGLDFIVNEHTLIPR 95

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV   L  ++    K   +RILD+GTG+G + +AL K  P      +DIS +AL+
Sbjct: 96  PETEELVALILE-NIKYSSKSKNLRILDIGTGSGCIPIALKKNLPDANIFAIDISAEALK 154

Query: 136 IAKSNAVTNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +A+ NA  N VS  F  +++D  S       S +  FD+IVSNPPY+ ++    +   V 
Sbjct: 155 VARKNAENNDVSVEF--VKADVLSLEDLNIFSEKKYFDIIVSNPPYVRNLEKAAMRKNVL 212

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P  +L     + L  Y  IAD    HL K+G    EI      +++ + E +    +
Sbjct: 213 DYEPETALFVEDKNPLIFYDKIADLAKAHLVKNGSLYFEINQYLGKEMMELMEEKDFSTI 272

Query: 248 NAFKDYGGNDRVL 260
               D  G DR++
Sbjct: 273 ELHGDTFGVDRMI 285


>gi|319760482|ref|YP_004124420.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039196|gb|ADV33746.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 281

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +VT  S  Q++   ++ L  +Q   L   I R  + E I  I+G ++F+++  
Sbjct: 24  DAELLLQKVTRKSKIQLLTFGETNLSFKQIQTLQLLINRRSQGEPIAHIIGVKEFWSLNF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S   F PRP+TE L++  L  +       D V ILDLGTG G + L L  E P +   
Sbjct: 84  KVSPGVFIPRPDTECLIEQILNLNF----NSDNVEILDLGTGVGTIALTLASERPSWNIT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
           G++   +AL +A  N +     +  + +  +WF  ++    FD+IVSNPPYI    +  L
Sbjct: 140 GIEQQKQALSLAHKNKLLLDC-KNVNFIYGNWFKYLKNSKKFDLIVSNPPYINKKDLHWL 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V  F+PR +L     GLS    I      +L   G   +E G+NQ   V  +   ++
Sbjct: 199 SKDVY-FEPRNALISKNSGLSDLMIICQYSKYYLCPSGWIFLEHGWNQGKQVRNLLSKQQ 257

Query: 244 LFLVNAFKDYGGNDRV 259
              +    DY   +R+
Sbjct: 258 FINICTKFDYNNCERI 273


>gi|313606724|gb|EFR83442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes FSL F2-208]
          Length = 277

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 28  GLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 87

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 88  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALA 143

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 144 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 201

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 202 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 261

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 262 DINSKDR 268


>gi|332655313|ref|ZP_08421053.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcaceae bacterium D16]
 gi|332515818|gb|EGJ45428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcaceae bacterium D16]
          Length = 287

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 6/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +C     S  Q   D    +       +   + R L  E +  I+G  +FY + L
Sbjct: 27  EARELICYAADKSREQFYRDMPLYVSGEMERRVEELVQRRLAGEPVAYIVGEWEFYGLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S+D   PR +TE+L +  +  +    E     R+LDL  G+G V LA+   +P  + V
Sbjct: 87  NISNDVLIPRIDTEVLAERGILRARAAGEG---ARVLDLCAGSGCVGLAIAANAPDCRVV 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDC 182
             ++S  AL + K N   N ++ R   L  +     +S    FDVIVSNPPYI +  ++ 
Sbjct: 144 LGELSEGALRVCKQNVRRNELNARVTCLSVNAMEPPASSLWDFDVIVSNPPYIPTGDIEG 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   V+D++P ++LDGG DGL  YR IA      +   G    E+G  Q  DV  I    
Sbjct: 204 LDHSVKDYEPHMALDGGADGLDFYRFIAAKWKNAIRLGGSLIFEVGIGQAPDVENILAQN 263

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +    D  G  RV+
Sbjct: 264 GFEQIQTTADTQGIWRVV 281


>gi|126663423|ref|ZP_01734420.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
 gi|126624371|gb|EAZ95062.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
          Length = 293

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 133/258 (51%), Gaps = 29/258 (11%)

Query: 22  VIVDPDSVL--DDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNVRLTLSSDTFEPRPET 78
           V ++P+  L  DD +++   N+I+  L+ E  I  I G   FY ++  ++ +T  PRPET
Sbjct: 42  VALNPNFELSEDDVEKW---NSILADLQQEKPIQYITGEAWFYGLQFEVNENTLIPRPET 98

Query: 79  ELLVDSALA-----FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           E LV+  L      + LP       + ILD+GTG+G + ++L    P      +D+S KA
Sbjct: 99  EELVEWILNSPITHYPLP-------ITILDIGTGSGCIPISLKANLPQANVSAIDVSEKA 151

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCL 183
           LE+AK NAV+N V   F   + L+ +  S +          F++IVSNPPY+ ++    +
Sbjct: 152 LEVAKRNAVSNKVEINFIQTNILEVEDLSQLPSPNFHHPSSFNIIVSNPPYVRNLEKQEI 211

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V D++P ++L     D L  YR IA    ++L+ +GL   EI      + V + ++ 
Sbjct: 212 KKNVLDYEPHLALFVENTDALLFYRKIAQLALKNLSPNGLLFFEINQYLGKETVELLKNL 271

Query: 243 KLFLVNAFKDYGGNDRVL 260
               ++  KD  GNDR++
Sbjct: 272 GFKNIDLKKDIYGNDRMI 289


>gi|296876521|ref|ZP_06900572.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
 gi|296432514|gb|EFH18310.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
          Length = 276

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 17/230 (7%)

Query: 38  LTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L ++I   LKH      I+G  +F     T+      PRPETE LV   L       E+ 
Sbjct: 54  LLDSIFEQLKHHVPAQYIIGSAEFCGHVFTVDERVLIPRPETEELVTLIL-------EEN 106

Query: 97  D--VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           D   +R+LD+GTG+GA+ ++L    P ++    D+S +AL +A+ NA        F +  
Sbjct: 107 DEKALRVLDIGTGSGAIAISLALAKPTWQVQASDVSEEALALAQKNAKQLEAFLEFKS-- 164

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD    + G +D+IVSNPPYI    V+ +G  V   +P ++L    DG + Y  IA    
Sbjct: 165 SDVLEQLAGPYDLIVSNPPYISRDDVEEVGANVLASEPHLALFADRDGYAIYEKIAQQAP 224

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLL 261
             L  DG   +EIGY Q   V  +F  R+ F    V   KD  G DR+++
Sbjct: 225 SVLTPDGKIYLEIGYKQGAKVKELF--REAFPDKRVRVLKDQFGQDRMVV 272


>gi|257066245|ref|YP_003152501.1| modification methylase, HemK family [Anaerococcus prevotii DSM
           20548]
 gi|256798125|gb|ACV28780.1| modification methylase, HemK family [Anaerococcus prevotii DSM
           20548]
          Length = 262

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 8/251 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   +   VI+  +  LD      L   + +  +   +   +G  +FY +   +   
Sbjct: 16  LTYLLDTNKSSVILKSEEELDSEISLKLDQILKKYSEGYPLQYAIGEWEFYGLNFKVDER 75

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD    F +    K++  RILD+GTG+GA+ ++L +  P  + +G DI 
Sbjct: 76  ALIPRFETEIIVD----FIIKSPYKKN--RILDIGTGSGAISISLARNLPTSEIIGSDIE 129

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            KAL +A+ N      S     ++SD F  +   FD+I+SNPPYI     D L  E    
Sbjct: 130 EKALSLARENKKRLKAS-NVSFIKSDLFEEISEKFDIIISNPPYINQTDYDKLD-ERLYH 187

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L    DGL  Y+ I    + +LN  G    EIGY+QK  +  +        +   
Sbjct: 188 EPKSALLASEDGLYFYKRIIKEANSYLNDGGRLVFEIGYDQKQRICELLNESDFKNIKCM 247

Query: 251 KDYGGNDRVLL 261
           KDY   DR ++
Sbjct: 248 KDYNDFDRFII 258


>gi|312383011|gb|EFR28253.1| hypothetical protein AND_04041 [Anopheles darlingi]
          Length = 348

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 14/211 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W DF ++ L +    F PRPETE LV+      L +++ +     L++G+G+GA+ L++L
Sbjct: 135 W-DFRDLTLKMIPPVFIPRPETEELVE----LILQQMDSQKETFFLEIGSGSGAISLSIL 189

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----DTLQSDWFSSVEG-LFDVIVSN 171
           K  P   G+ +D S  A E+ + NA   G+  R       L +D   ++ G  FD+IVSN
Sbjct: 190 KHVPKSSGIAIDQSRLACELTRENAAAVGLDSRLRIFKHKLINDLPDTLAGEQFDMIVSN 249

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+ SV++  L  E++ ++   +LDGG DGL+  + I    S+HL KDG+  +E+  + 
Sbjct: 250 PPYVPSVLLPTLEPEIKIYEDLRALDGGNDGLTVIKAILRIASKHLTKDGVLWLEVDISH 309

Query: 232 KVDVVRIF----ESRKLFLVNAFKDYGGNDR 258
              + +      +   L  V ++KD    DR
Sbjct: 310 PPVIEKFLAQHGDKMGLRFVASYKDLFQKDR 340


>gi|289423625|ref|ZP_06425425.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus anaerobius 653-L]
 gi|289155993|gb|EFD04658.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus anaerobius 653-L]
          Length = 302

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 16/276 (5%)

Query: 1   MQALRDSHS--------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52
           M  L+DS           LC+V      ++++  D  +   +       + +    + I 
Sbjct: 19  MDKLKDSSPSPRLDVDLMLCKVMDFDRMKLMMSYDKPMHPEEIKEFERMLEQRSMRKPIA 78

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGA 110
            I+  ++F  +   ++ +   PRP+TE++V+  L      P+  +   ++I+D+  G+GA
Sbjct: 79  YIINEKEFMGLNFYVNENVLIPRPDTEIIVEEVLDIIDRAPKEGENGPIKIMDMCLGSGA 138

Query: 111 VCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GL 164
           + L++ K S    +  GVDIS +A+++A+ N    G+    D ++SD FSS +       
Sbjct: 139 IALSIAKLSSVDLQICGVDISKEAIDVARVNRRRLGLGACVDFVESDLFSSSDLEVYLDS 198

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYIE  +++ L  +V+D++P ++L GG DG+  Y++I     + L   G   
Sbjct: 199 LDILVSNPPYIEDHVIEGLEPDVKDYEPILALAGGDDGMDFYKSIIKSSPKFLKIGGWLV 258

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            E G++Q   +    E      +   KD  G +R++
Sbjct: 259 FESGHDQAEKIKNEMEKVGFDCLYFKKDLQGYNRMV 294


>gi|91786751|ref|YP_547703.1| HemK family modification methylase [Polaromonas sp. JS666]
 gi|91695976|gb|ABE42805.1| [protein release factor]-glutamine N5-methyltransferase
           [Polaromonas sp. JS666]
          Length = 287

 Score =  105 bits (262), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 112/242 (46%), Gaps = 19/242 (7%)

Query: 25  DPDSVLDD---RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           D D + D+   R R F     +R  + E +  I+G ++F+ + L + +    PRP+TE L
Sbjct: 49  DTDQLTDEVAQRMRAF----SLRRARGEPLAYIVGSKEFFGLELQVDARVLVPRPDTETL 104

Query: 82  VDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLA----LLKESPFFKGVGVDISCKALEI 136
           V  +L     P + +R   +ILDLGTG+GA+ LA    L       + V VD S  AL +
Sbjct: 105 VHWSLEVLQAPAMTERP--QILDLGTGSGAIALAIAHSLQAAGRPARVVAVDASAGALAV 162

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA    +   F   QS+W   V G F +I SNPPYI S     + L     +P  SL
Sbjct: 163 ARENARRLQLELEFS--QSNWLDEVGGHFHLIASNPPYIASADPHLVALA---HEPLGSL 217

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
             G DGL   R I      HL   G   +E GY+Q   V  +   R    V +  D  G 
Sbjct: 218 AAGPDGLGDIRQIVAKAPEHLAPGGWLLLEHGYDQAAAVRGLLRERGFAQVQSRLDLAGI 277

Query: 257 DR 258
            R
Sbjct: 278 AR 279


>gi|58617581|ref|YP_196780.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Gardel]
 gi|58417193|emb|CAI28306.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase (hemK) [Ehrlichia ruminantium str. Gardel]
          Length = 280

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V+ DP   L+        + + +   +  I  I+G R+F+++   ++S   +PRP++E +
Sbjct: 42  VVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFWSMDFIVNSHVLDPRPDSESI 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           + +   F++   + R +V I D GTGTG +   LL       G+ V+ + KA  +A  N 
Sbjct: 102 ISAV--FTMYPCKNRRLV-IGDFGTGTGCLLTVLLSYYKLAVGIAVEKNVKAYRVAYQNF 158

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             + V  R     S W +  E + D+IVSNPPYI    +  L  EV+ ++P ++LDGG  
Sbjct: 159 KNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIMTLQPEVKLYEPYVALDGGPV 217

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           GL +Y +I   + R L K+G+  +EIG +Q
Sbjct: 218 GLENYFSIFVVIKRCLKKNGVAVLEIGEDQ 247


>gi|57239542|ref|YP_180678.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579527|ref|YP_197739.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161621|emb|CAH58549.1| putative methyltransferase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418153|emb|CAI27357.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase (hemK) [Ehrlichia ruminantium str. Welgevonden]
          Length = 280

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V+ DP   L+        + + +   +  I  I+G R+F+++   ++S   +PRP++E +
Sbjct: 42  VVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFWSMDFIVNSHVLDPRPDSESI 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           + +   F++   + R +V I D GTGTG +   LL       G+ V+ + KA  +A  N 
Sbjct: 102 ISAV--FTMYPCKNRRLV-IGDFGTGTGCLLTVLLSYYKLAVGIAVEKNVKAYRVAYQNF 158

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             + V  R     S W +  E + D+IVSNPPYI    +  L  EV+ ++P ++LDGG  
Sbjct: 159 KNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIMTLQPEVKLYEPYVALDGGPV 217

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           GL +Y +I   + R L K+G+  +EIG +Q
Sbjct: 218 GLENYFSIFVVIKRCLKKNGVAVLEIGEDQ 247


>gi|218289203|ref|ZP_03493438.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240551|gb|EED07731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 266

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 24/198 (12%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           ++ E +  +LG +DFY     +  D   PRP+TE+LV+ A+ F L R+      R++D+G
Sbjct: 80  VQGEPLAYVLGKQDFYGRTFEVGPDCLIPRPDTEVLVEEAIRF-LKRMPSG--TRVIDVG 136

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEG 163
           TG+G + +++    P      VD+S  AL +A+ NA      ER   +  DW ++  +E 
Sbjct: 137 TGSGCIAVSIALACPGVSVTAVDLSVDALAVARRNA------ERLGAV-VDWAAADGIEW 189

Query: 164 LFD---------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           L +          IVSNPPYI +  +D L   VRD++PR++LDGG DGL  YR IA  + 
Sbjct: 190 LIERAERGRPWHAIVSNPPYIPTSEIDQLEPSVRDYEPRLALDGGEDGLQFYRRIA-ALP 248

Query: 215 RHLNKDGLCSV--EIGYN 230
            ++   G   V  E+G+N
Sbjct: 249 PYVLARGRAGVFLEVGHN 266


>gi|225848847|ref|YP_002729011.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644266|gb|ACN99316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 282

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 12/259 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +  +  H++  DPD  + D Q     N  ++  K   +  ++  ++F+ +   +   
Sbjct: 30  LQEILKIPKHKIFTDPDLEIKDYQE--AINVALQRSKKVPLGYLIKKKEFFGLEFYIEEG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE+LV+  L     ++E       L++G G+G + ++LL      K   +DIS
Sbjct: 88  VLIPRPETEVLVEKVLH----QLENLKNPLGLEVGVGSGCISVSLLYNKKDLKMYALDIS 143

Query: 131 CKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            KAL+I K NA    + +R     FD ++ D         D +VSNPPYI     + L  
Sbjct: 144 EKALKITKINAEKYDLLDRLTLIKFDVMKDDVKDLNLDRLDFVVSNPPYISEDEYESLPE 203

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV+  +P+ +L  G  G   Y  I +    +L + G  + EIG NQ   V  I E     
Sbjct: 204 EVKK-EPKEALISGKVGTEFYEKIVEKFKNYLKEYGFFAFEIGINQAEKVKSILERNGFK 262

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +  +KD  G DRVL+  +
Sbjct: 263 NIKIYKDLAGIDRVLIASK 281


>gi|254825335|ref|ZP_05230336.1| modification methylase [Listeria monocytogenes FSL J1-194]
 gi|254932216|ref|ZP_05265575.1| modification methylase [Listeria monocytogenes HPB2262]
 gi|255519762|ref|ZP_05386999.1| HemK family modification methylase [Listeria monocytogenes FSL
           J1-175]
 gi|293583771|gb|EFF95803.1| modification methylase [Listeria monocytogenes HPB2262]
 gi|293594578|gb|EFG02339.1| modification methylase [Listeria monocytogenes FSL J1-194]
 gi|328465146|gb|EGF36414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Listeria monocytogenes 1816]
 gi|328471150|gb|EGF42054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Listeria monocytogenes 220]
 gi|332312972|gb|EGJ26067.1| Modification methylase [Listeria monocytogenes str. Scott A]
          Length = 283

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|46908714|ref|YP_015103.1| HemK family modification methylase [Listeria monocytogenes serotype
           4b str. F2365]
 gi|46881986|gb|AAT05280.1| modification methylase, HemK family [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 283

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|237755640|ref|ZP_04584253.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692204|gb|EEP61199.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 291

 Score =  105 bits (261), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 127/271 (46%), Gaps = 23/271 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES---IHRILGWRDFYN 62
           ++   + ++  L  H +I  PD  + +         +V S K  S   +  +   ++F+ 
Sbjct: 25  EASILISKILDLPKHYIISYPDLEISEEDA---KKLVVLSEKRASGYPMAYLTKSKEFFG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----LDLGTGTGAVCLALLKE 118
           +   +      PRPETE+LV+         IEK    +     L++G G+G + ++LLK 
Sbjct: 82  LDFYIEEGILIPRPETEILVEKV-------IEKLQNAKGELIGLEVGIGSGCISVSLLKN 134

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPP 173
               K +G+DIS KALEI + NA  +GV +R     FD +     S      D +VSNPP
Sbjct: 135 IKNLKIIGIDISEKALEITEKNAEIHGVLDRLKLFKFDIMNEKMNSLNLPKLDFVVSNPP 194

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI+      L  EV+  +P+ +L  G +G   Y  I + +   L +DG  + E+G  Q  
Sbjct: 195 YIKEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAE 253

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            V +I E      +  +KD  G DRV++  +
Sbjct: 254 KVKQILEDNGYKNIEIYKDLAGIDRVIIASK 284


>gi|313205777|ref|YP_004044954.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Riemerella anatipestifer DSM 15868]
 gi|312445093|gb|ADQ81448.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Riemerella anatipestifer DSM 15868]
          Length = 281

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           T AI +    +   +ILG  DF+ ++  ++     PRPETE L+D A+  ++ +   +  
Sbjct: 59  TKAINQLKSGKPYQQILGEADFFGMKFCVNQHVLIPRPETEELLDYAIK-TISKEFSKTE 117

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+GTG+G + + L K  P  +   +D S +AL IAK NA  +    +F  +  D+ 
Sbjct: 118 IKILDIGTGSGVIPIVLKKHFPNARVASIDFSKEALTIAKKNAERHHTEIKF--ILDDYL 175

Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRH 216
           + ++   +DVI+SNPPYI    V  +   V++F+P ++L     D L  YR IA     +
Sbjct: 176 NYTLPTHYDVIISNPPYIGIEEVSEISDTVKNFEPHLALFSPCSDPLVFYRKIATDAKHY 235

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           LN  G   +EI  NQK+    +   +        KD   NDR+++
Sbjct: 236 LNNGGFLFLEI--NQKLGAETLALYKDFSDAQLIKDLSNNDRMII 278


>gi|319789798|ref|YP_004151431.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermovibrio ammonificans HB-1]
 gi|317114300|gb|ADU96790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermovibrio ammonificans HB-1]
          Length = 283

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 127/261 (48%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L    GL    ++    D  L D +       IVR  K E +  I G ++FY   
Sbjct: 27  DAELLLVHSLGLKGRVELYTQFDRPLTDDEVERYRQLIVRRAKGEPVAYITGKKEFYGFE 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESP 120
             +      PRPETELLVD AL++    ++ +    ++D+GTG+G V L L K     + 
Sbjct: 87  FLVDRGVLVPRPETELLVDVALSY----LKGKQGKTVVDVGTGSGCVILTLCKLLGDANR 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           ++   GVD+S KALE+A+ N    G S  F  L+S+   +V+   D +V+N PY+  V  
Sbjct: 143 YY---GVDLSPKALEVAEKNRERLGCSVTF--LRSNLLEAVDFPVDAVVANLPYV-PVGD 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V  ++P ++L GG DGL     +       +N  G  ++E+G  Q   V  + E
Sbjct: 197 KRLHKWVLKYEPAMALFGGKDGLELIERLIVQAKEKINPKGFIALEVGEGQADRVKSLLE 256

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
           +     V +F+D  G +RV++
Sbjct: 257 TAGFLNVKSFRDLSGIERVVV 277


>gi|213962836|ref|ZP_03391096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga sputigena Capno]
 gi|213954493|gb|EEB65815.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga sputigena Capno]
          Length = 287

 Score =  105 bits (261), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 10/243 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V+ + D++L D  +  +  AI      + I  ILG  +F++ R  +  +   PRPETE L
Sbjct: 42  VLANADTLLTDDIKQSIQQAITELQTAKPIQYILGETEFFSNRFFVDENVLIPRPETEEL 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD  L  + P  +K   + ILD+GTG+G + ++L K  P      +D+S KA+ +A+ NA
Sbjct: 102 VDWVLQ-TYP--DKNYPLHILDIGTGSGCIPISLAKALPKSVVTAIDVSPKAITVAQRNA 158

Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             NGV  +F   D LQ+    ++   +DVI+SNPPY+  +    +   V  ++P ++L  
Sbjct: 159 DRNGVKIQFLQCDILQT---KTLPQKYDVIISNPPYVRELEKTEMHSNVLSYEPHLALFV 215

Query: 199 GID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
             +  L  Y  IA    R+L  +G    EI      ++  +   +    +   +D  GND
Sbjct: 216 PNERPLLFYEQIASLAQRYLKPEGSLFFEINQYLAAEMQAMLTQKNFAEIILRQDLSGND 275

Query: 258 RVL 260
           R+L
Sbjct: 276 RML 278


>gi|300777693|ref|ZP_07087551.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
           ATCC 35910]
 gi|300503203|gb|EFK34343.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
           ATCC 35910]
          Length = 282

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 116/217 (53%), Gaps = 18/217 (8%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
            +ILG  +FY ++  +  +   PRPETE L++ A+      + + +D+ +ILD+GTG+G 
Sbjct: 72  QQILGETEFYGMKFFVDENVLIPRPETEELLEIAIREIKNSKFKDQDI-KILDIGTGSGI 130

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + L L K  P      VD S KAL  AK NA  + +   F  + +D+ +   G  +D+I+
Sbjct: 131 ISLVLKKYFPEAHISSVDFSEKALNTAKRNAEYHQLEINF--IHADYLNYEPGEDYDIII 188

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           SNPPYI       +   V++F+P+++L     D L  YR IA+   ++L++DGL  +EI 
Sbjct: 189 SNPPYIGIEEEIEIADSVKEFEPKMALFSPTADALIFYRKIAEDAKKYLSEDGLLFLEI- 247

Query: 229 YNQK-----VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            NQK     +D+   F +     V   KD   NDR +
Sbjct: 248 -NQKLGPETLDLYHYFSN-----VQLLKDLSENDRFI 278


>gi|269123394|ref|YP_003305971.1| modification methylase, HemK family [Streptobacillus moniliformis
           DSM 12112]
 gi|268314720|gb|ACZ01094.1| modification methylase, HemK family [Streptobacillus moniliformis
           DSM 12112]
          Length = 359

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 104/209 (49%), Gaps = 6/209 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I   + FY     +  +   PR +TE +V+ AL      I K +  ++LD+GTG+GA
Sbjct: 147 IQYIFNEQVFYGYSFYVDKNVLIPRIDTEFVVEKALEL----INKINNPKVLDIGTGSGA 202

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIV 169
           + L +  E+   K +  DIS  AL+IAK N+    V E    L SD FS V    FD+IV
Sbjct: 203 IALVIGLENRESKILATDISENALKIAKKNSEILNV-ENVKFLHSDLFSEVSYKEFDLIV 261

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI    +  +G  V   +P+ +L     GL  Y  I+     HL  DG    EIGY
Sbjct: 262 SNPPYISRDEIGIMGENVLLHEPQNALFAEDGGLYFYFEISKNAKNHLKNDGYLLFEIGY 321

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +Q   V  I E+     V+  KD  GN+R
Sbjct: 322 SQGNKVKDIMENMGYIDVSIGKDLTGNER 350


>gi|298493041|ref|YP_003723218.1| protein-(glutamine-N5) methyltransferase ['Nostoc azollae' 0708]
 gi|298234959|gb|ADI66095.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           ['Nostoc azollae' 0708]
          Length = 299

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 114/218 (52%), Gaps = 11/218 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L  + I  +  WR F   +L +SS    PRPETE+L+D A+A ++    +       DLG
Sbjct: 80  LPVQYIAGVTPWRMF---KLAVSSAVLIPRPETEMLIDLAVAAAVSGGVQSG--HWADLG 134

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162
           TG+GA+ L L +         VD S +AL +AK+NA   G  E+    QS W+  +E   
Sbjct: 135 TGSGAIALGLAEVLINATIHAVDFSPEALAVAKTNAENVGFGEQVKFYQSSWWEPLESLK 194

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G F  +VSNPPYI +  V  L  EV   +P ++LDGG DGL   R + +    +L   G+
Sbjct: 195 GQFSGMVSNPPYIPTDTVLTLQPEVLKHEPHLALDGGADGLDCIRHLIEVSPAYLRPGGV 254

Query: 223 CSVEIGYNQKVDVVR-IFESRKLFL-VNAFKDYGGNDR 258
             +E+   Q  D+VR + E++  +  ++  +D  G +R
Sbjct: 255 WLIEMMAGQ-ADIVRELLENKGHYCNISIHRDLAGIER 291


>gi|315022825|gb|EFT35849.1| putative protoporphyrinogen oxidase [Riemerella anatipestifer
           RA-YM]
 gi|325336782|gb|ADZ13056.1| Methylase of polypeptide chain release factor [Riemerella
           anatipestifer RA-GD]
          Length = 281

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 115/225 (51%), Gaps = 7/225 (3%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           T AI +    +   +ILG  DF+ ++  ++     PRPETE L+D A+  ++ +   +  
Sbjct: 59  TEAINQLKSGKPYQQILGEADFFGMKFCVNQHVLIPRPETEELLDYAIK-TISKEFSQTE 117

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+GTG+G + + L K  P  +   +D S +AL IAK NA  +     F  +  D+ 
Sbjct: 118 IKILDIGTGSGVIPIVLKKHFPNARITSIDFSKEALVIAKKNAERHHTEIEF--ILDDYL 175

Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216
           +  +   +DVI+SNPPYI    V  +   V++F+P ++L     D L  YR IA     H
Sbjct: 176 NYKLPTHYDVIISNPPYIGIEEVSEISDTVKNFEPHLALFSPCADPLVFYRKIATDAKHH 235

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           LN  G   +EI  NQK+    +   +        KD   NDR+++
Sbjct: 236 LNNGGFLFLEI--NQKLGAETLALYKYFSDAQLIKDLSNNDRMII 278


>gi|466533|dbj|BAA05915.1| possibly protoporphyrinogen oxidase [Escherichia coli]
          Length = 225

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 103/190 (54%), Gaps = 8/190 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F+++ 
Sbjct: 22  RDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----EQPCRILDLGTGTGAIALALASERPDCEI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           + VD    A+ +A+ NA    + +    LQSDWFS++ G  F +IVSNPPYI+       
Sbjct: 137 IAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQ 195

Query: 184 GLEVRDFDPR 193
             +VR F+PR
Sbjct: 196 QGDVR-FEPR 204


>gi|260063120|ref|YP_003196200.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
           HTCC2501]
 gi|88784689|gb|EAR15859.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
           HTCC2501]
          Length = 304

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 15/249 (6%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           ++P  +L   +   L NA+ +    + +  I G   F ++ L +      PRPETE LV 
Sbjct: 44  LEPGKMLTREEEAPLFNALSQLAAGQPVQYITGTARFLDMDLRVGPGALIPRPETEELVR 103

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L      + + +   ILD+GTG+G + L L K  P  +   +DIS +ALE+A+ NA  
Sbjct: 104 WVLERHAADLREGN---ILDIGTGSGCIALGLAKSLPAARVTALDISGEALEVARENARH 160

Query: 144 NGVSERF-----DTLQSDWFSSV---EGL---FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            G+  R         + +W  S+   EG    +D+I+SNPPYI       L + VRD +P
Sbjct: 161 LGLDVRLVRADIRNPEGEWPESILNPEGEWPGYDLIISNPPYIPRGQEGQLAVHVRDHEP 220

Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           R +L     D L +YR IA    RHL   G   VEI  +       +F    L  V+  K
Sbjct: 221 REALFAPDSDPLLYYRHIAGFSRRHLRGGGWLYVEIHEDFGAPTAELFREAGLLEVSLKK 280

Query: 252 DYGGNDRVL 260
           D  G DR L
Sbjct: 281 DIFGKDRFL 289


>gi|212702186|ref|ZP_03310314.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098]
 gi|212674391|gb|EEB34874.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098]
          Length = 300

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 7/239 (2%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++  P  V DD     +     R    E +  I G R+F+     +S  T  PRPETELL
Sbjct: 60  MLAMPSPVADDAA-GAIRALTARRCAGEPLAHITGRREFFGRDFEVSPQTLIPRPETELL 118

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++      L        VR  DLGTGTG + + L  E P  +G+ ++ S  AL +A  N 
Sbjct: 119 LE----IVLRECAGHGEVRFADLGTGTGCIGITLALELPHSRGLLLEYSAGALPVAARNI 174

Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +   ++R   ++ D F+   + G  DV+VSNPPYI +   D +  EV   +P  +L   
Sbjct: 175 RSLQAADRLALVRGDMFTPPLLPGGLDVLVSNPPYIAAAEEDEVMAEVLHHEPHSALFSE 234

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            DGL H   +     R L   GL  +E GY Q   V R+            +D  G DR
Sbjct: 235 QDGLRHLHAVIRAGQRALKPGGLIVMEHGYRQGGAVRRLLAEVGYSEPRTEQDLAGLDR 293


>gi|254415118|ref|ZP_05028880.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC
           7420]
 gi|196177924|gb|EDX72926.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC
           7420]
          Length = 309

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 101/216 (46%), Gaps = 8/216 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVC 112
           I  WR F    L +S     PRPETE L+D A+ A       + D  +  DLGTG+GA+ 
Sbjct: 95  ITPWRRF---SLKVSPAVLIPRPETEYLIDLAVSATGQSATPQLDAGQWADLGTGSGAIA 151

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIV 169
           L L +         VD S  AL IA+ NA   G   R    Q  W S   S++G    IV
Sbjct: 152 LGLAEAFRSATIHAVDYSHDALAIAQLNAQQLGFESRIQFYQGSWLSPLASLKGQLSGIV 211

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI    +  L  EVRD +P ++LDGGIDGL   R +      +L   G+  +E+  
Sbjct: 212 SNPPYIPRDELQQLQPEVRDHEPLMALDGGIDGLDCIRHLIRTAPDYLRPGGVWIIEMMA 271

Query: 230 NQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            Q   V ++   +  +  +    D  G DR  L  R
Sbjct: 272 GQGDTVAQLLHQQGRYCQIQILPDLAGIDRFALAYR 307


>gi|254853929|ref|ZP_05243277.1| modification methylase [Listeria monocytogenes FSL R2-503]
 gi|300764958|ref|ZP_07074946.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|258607317|gb|EEW19925.1| modification methylase [Listeria monocytogenes FSL R2-503]
 gi|300514258|gb|EFK41317.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
          Length = 283

 Score =  104 bits (260), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPDISVTASDISAPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|86142851|ref|ZP_01061290.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
           MED217]
 gi|85830883|gb|EAQ49341.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
           MED217]
          Length = 280

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 128/248 (51%), Gaps = 12/248 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L+++++ ++    LD+ QR     A+ R  ++E +  I+   +FY     LS     PRP
Sbjct: 37  LAAYEIPLNFQLELDEAQRNLFDKALSRLQQNEPLQYIVASTEFYGFPFQLSPAVLIPRP 96

Query: 77  ETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           ETE LVD     F      K     ILD+GTG+GA+ ++L K  P  K   +D+S  AL+
Sbjct: 97  ETEELVDWIYTDF------KNTSCTILDIGTGSGAIAVSLAKLLPEAKVTAIDVSEDALK 150

Query: 136 IAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           IA++NA +N V+ +F  ++ D     +++  +DVIVSNPPY+  +    +   V +++P 
Sbjct: 151 IAEANASSNAVNVQF--IKQDILDCQALDRSYDVIVSNPPYVRDLEKVEIKANVLNYEPH 208

Query: 194 ISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++L     + L  Y+ IA+   + L  +G+   EI     V+ V + ++     V    D
Sbjct: 209 LALFVEDQNALIFYKKIAELAIQALQPNGILYFEINQYLSVETVGLLKNIGFSQVELRDD 268

Query: 253 YGGNDRVL 260
           + G  R++
Sbjct: 269 FAGKPRMI 276


>gi|118468920|ref|YP_889201.1| modification methylase, HemK family protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170207|gb|ABK71103.1| modification methylase, HemK family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 281

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 106/221 (47%), Gaps = 11/221 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  ++G   F  + L +    F PRPETE L++ A+A  LPR    D V I+DL T
Sbjct: 65  KRIPLQHLVGTAAFGPLTLEVGPGVFIPRPETESLLEWAVAQQLPR----DAV-IVDLCT 119

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF 165
           GTGA+ LAL +  P  + + V+ S  ALE A+ NA    V     D    D    ++G  
Sbjct: 120 GTGALALALAQHRPQARVIAVEDSPAALEYARCNAAGTSVEVLAADVTAPDLLPELDGAV 179

Query: 166 DVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           D++VSNPPYI E   +D    EV D DP  +L GG DG++  R I    +R L   G C+
Sbjct: 180 DLVVSNPPYIPEGAELDP---EVADHDPAHALFGGPDGMAVIRPIVALAARWLRDGGKCA 236

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V  F     F  V A  D  G  R +   R
Sbjct: 237 VEHDDTTSARTVEAFTHDGNFTDVTARHDLTGRPRFVTATR 277


>gi|261365336|ref|ZP_05978219.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC
           25996]
 gi|288566276|gb|EFC87836.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC
           25996]
          Length = 287

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 111/227 (48%), Gaps = 15/227 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  I+G R+FY     +  D   PRPETE LV++ +   LP+       R+ D
Sbjct: 66  RRLNGEPIAYIIGGREFYGRWFEVCPDVLIPRPETEHLVEAVIEH-LPK-----NGRVWD 119

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----- 158
           LGTG+GAV + +  E    +    DIS +AL +A+ NA   G +  F +    WF     
Sbjct: 120 LGTGSGAVAVTVALERKDAEVRASDISRQALVVARRNAENLGAAVEFAS--GSWFDTDKT 177

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            S  +  FDVIVSNPPYIE+        ++R F+P+ +L    DGL+  R +A      L
Sbjct: 178 SSEDKYRFDVIVSNPPYIEADDSHLNQGDLR-FEPQTALTDFADGLTCIRELAQRAPEFL 236

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + G   +E GYNQ   V +I        +   +D  G DR+ L  R
Sbjct: 237 KEGGWLLLEHGYNQGGAVRQILSENGFTEIETRQDLAGLDRLTLGVR 283


>gi|30249864|ref|NP_841934.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718]
 gi|30180901|emb|CAD85823.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718]
          Length = 289

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 123/256 (48%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V    +  +I   + +L   Q       + R +  E +  + G R FY++  
Sbjct: 35  DARWILQSVLNTDAAFLIAHAEQLLSTDQVAHFRQMLARRIAGEPVAYLTGERGFYDLVF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV+ AL+    +I       +LDLGTG+GA+ + L +        
Sbjct: 95  EVTPDVLIPRPETELLVEMALS----KIPSDRKCNVLDLGTGSGAIAITLARHRASTCVT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184
            VD S  A+ +A+ NA  + V +    +++DWFSS     FDVIV+NPPY+ +       
Sbjct: 151 AVDFSPGAMAVARRNARMHAV-KNVVFIEADWFSSFTSEKFDVIVANPPYVAAGDPHLEE 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L    +GL   RTI      +L   G   +E GY+Q  DV R   ++  
Sbjct: 210 GDLR-FEPLTALVAQDNGLDCIRTIIAQAPGYLEPSGWLMLEHGYDQ-ADVCRELLAKAG 267

Query: 245 FL-VNAFKDYGGNDRV 259
           F  +    D  G DRV
Sbjct: 268 FTHLFTRPDIAGTDRV 283


>gi|229542477|ref|ZP_04431537.1| modification methylase, HemK family [Bacillus coagulans 36D1]
 gi|229326897|gb|EEN92572.1| modification methylase, HemK family [Bacillus coagulans 36D1]
          Length = 287

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 18/253 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           LS+ ++++ PD     RQ      A     K   +  I G+  FY  +  ++ D   PRP
Sbjct: 44  LSNLRMVLPPDVEAKFRQ------AAEAHAKGVPVQHITGYETFYGRKFFVNGDVLIPRP 97

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LV  A+        +   +++ D+GTG+G +   +  E P       DIS KAL +
Sbjct: 98  ETEELVQGAIGRIRRHFGETKGLKLADIGTGSGIIATTIKLELPELLVYASDISEKALAV 157

Query: 137 AKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           A+ NA       RF   D LQ   F   E L D+++SNPPYI       L + VRD DP 
Sbjct: 158 AEKNAEALHADIRFVHGDLLQP--FIHGEKL-DIVLSNPPYIPETDRSSLSVVVRDHDPE 214

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAF 250
            +L GG DGL+ YR   + +   L+K  L   EIG  Q   V  +   R  F   +V   
Sbjct: 215 TALFGGEDGLAFYRRFMETLPSVLSKRALVGFEIGSGQGERVSCLL--RDTFPESVVEVV 272

Query: 251 KDYGGNDRVLLFC 263
           +D  G++R ++FC
Sbjct: 273 RDINGHER-MVFC 284


>gi|330846742|ref|XP_003295164.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum]
 gi|325074183|gb|EGC28309.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum]
          Length = 340

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 129/270 (47%), Gaps = 24/270 (8%)

Query: 17  LSSHQVIVDPDSVL---DDRQRFFLTNA--------IVRSLKHESIHRILGWRDFYNVRL 65
           L SH + +D  ++       Q  FLTN         + R L +E I  ++G+R F+  + 
Sbjct: 66  LISHVLDIDSSAITLFSKKNQHRFLTNEEYSRLQELVNRRLLNEPISYLIGYRYFWKHKF 125

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                T  PRP++E +V+  L        K D  R+LDLGTGTG + L++L E     GV
Sbjct: 126 HCDRSTLIPRPDSETIVEKILEEKNKNNLKFD--RVLDLGTGTGCLLLSILYELDGSFGV 183

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL-----FDVIVSNPPYIES 177
           G+D S ++L +A  NA    + +R   L SDW    S V+ L     FD+++SNPPYI  
Sbjct: 184 GIDKSKESLLLANKNAKELELKDRVCFLNSDWNHQESLVKELGQFKPFDLVISNPPYISI 243

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA---DGVSRHLNKDGLCSVEIGYNQKVD 234
                L   V+D++P  +L    +GL  YR I          L+ +     EIG  Q+ D
Sbjct: 244 DEYKELNETVKDWEPTTALIADENGLKDYRNIGLLLKNNKELLSNNAQVVFEIGKGQEND 303

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++ I ES      ++ KD     R L+F R
Sbjct: 304 IIEIMESCGFKFTDSKKDLSSIIRCLVFTR 333


>gi|329118657|ref|ZP_08247361.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465392|gb|EGF11673.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 271

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 122/256 (47%), Gaps = 17/256 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C  TG +  Q+I      L       L+    R L  E    ILG R+FY  R T+S   
Sbjct: 22  CAATGWTPAQLITRSREPLPPDTAAALSALENRRLAGEPAAYILGEREFYGRRFTVSPAV 81

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LV++ALA    R+      R+ DLGTG+GA+ + L  E P       DIS 
Sbjct: 82  LIPRPETEHLVEAALA----RLSAGG--RVWDLGTGSGAIAVTLACERPDAHVSASDISP 135

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEV 187
            AL +A  NA  +  + RF      WF+++       FD+IVSNPPYIE   VD   L  
Sbjct: 136 AALALAAQNAAAHRAAVRFAC--GSWFAALPPSEAADFDLIVSNPPYIE---VDDPHLHQ 190

Query: 188 RD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            D  F+P+ +L    DGL+  RT+A G +  L   G   VE G NQ      IF +    
Sbjct: 191 GDLRFEPQHALTDFSDGLTCIRTLAHGAAHRLRGGGYLIVEHGCNQGAAARSIFAAAGWQ 250

Query: 246 LVNAFKDYGGNDRVLL 261
            ++   D  G DR+ L
Sbjct: 251 NISTLPDLAGLDRITL 266


>gi|313617101|gb|EFR89653.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria innocua FSL S4-378]
          Length = 283

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV +A AF    +++  +  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTASDISAAALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK N++      RF   D L+S  F      FD+IV+NPPYI       +   V   +P
Sbjct: 150 IAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|229050999|ref|ZP_04194548.1| Protein hemK [Bacillus cereus AH676]
 gi|228722376|gb|EEL73772.1| Protein hemK [Bacillus cereus AH676]
          Length = 283

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 27/265 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R       
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKR------- 254

Query: 245 FLVNAFK--------DYGGNDRVLL 261
           FL  AF         D  G DR++ 
Sbjct: 255 FLQQAFPHAHVEVVFDINGKDRMVF 279


>gi|229072795|ref|ZP_04205994.1| Protein hemK [Bacillus cereus F65185]
 gi|228710286|gb|EEL62261.1| Protein hemK [Bacillus cereus F65185]
          Length = 283

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           LC V  ++   ++++  + + +D+++ F T  I + ++   I  ++G+  FY     ++ 
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGTPIQYMIGYEMFYGRSFFVNE 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +   PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       
Sbjct: 87  EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           VDI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L
Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +   
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|228924064|ref|ZP_04087340.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228835554|gb|EEM80919.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 283

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           LC V  ++   ++++  + + +D+++ F T  I + ++   I  ++G+  FY     ++ 
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +   PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       
Sbjct: 87  EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           VDI+ +++E+AK NA   G    F   D L    F   +   DV+VSNPPYI       L
Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTDQKLDVVVSNPPYIPEEDWRGL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +   
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|16801747|ref|NP_472015.1| hypothetical protein lin2686 [Listeria innocua Clip11262]
 gi|16415222|emb|CAC97912.1| lin2686 [Listeria innocua Clip11262]
          Length = 283

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 112/247 (45%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV +A AF    +++  +  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTASDISAAALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK N++      RF   D L+S  F      FD+IV+NPPYI       +   V   +P
Sbjct: 150 IAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSYPHATVLIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|82703753|ref|YP_413319.1| HemK family modification methylase [Nitrosospira multiformis ATCC
           25196]
 gi|82411818|gb|ABB75927.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
          Length = 286

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 119/229 (51%), Gaps = 11/229 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L  V  ++   ++  P+  L  +  Q F+L     R    E +  + G R+FY++
Sbjct: 21  DARMLLQYVLDVNHAYLLAHPEQKLTAEQAQAFYLLTG--RRTLGEPVAYLTGRREFYSL 78

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELL+D ALA    RI  +   RILDLGTG+GA+ L L    P  K
Sbjct: 79  EFNVTPAVLVPRPETELLIDLALA----RIPPQRPCRILDLGTGSGAIALTLATHRPLAK 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              VD+S  A+ +A +NA    ++     +++DWF  V G  FD+IVSNPPYI       
Sbjct: 135 VTAVDVSAAAVAVANANAARFSLNN-VRVIEADWFEGVAGESFDLIVSNPPYIAGDDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              ++R F+P+I+L    +GL   R I D    HL  +G   +E GY+Q
Sbjct: 194 AQGDLR-FEPQIALVAPSEGLGCIRLIIDSAPAHLAPEGSLLLEHGYDQ 241


>gi|153007051|ref|YP_001381376.1| HemK family modification methylase [Anaeromyxobacter sp. Fw109-5]
 gi|152030624|gb|ABS28392.1| modification methylase, HemK family [Anaeromyxobacter sp. Fw109-5]
          Length = 285

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 123/257 (47%), Gaps = 11/257 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L R       ++ +D D  L D +       + R  + E    ++G R+FY     
Sbjct: 28  AEVLLARALSCDRVRLYLDFDKPLGDPELAVYRELVRRRAEGEPTAYLVGKREFYGRDFA 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETELLV++ALA  LPR       R+LDL TG+GA+ + +  E P  + + 
Sbjct: 88  VDARVLVPRPETELLVEAALA-ELPRGG-----RLLDLCTGSGAIGVTVALERPDARVLA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
            D S  AL +A+ NA   G     +    D +++V G   F+VI SNPPY+ +  +  L 
Sbjct: 142 TDASEDALAVARENASRLGAV--VELAHGDLWAAVHGDARFEVIASNPPYVPAGELAGLA 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +P I+LDGG DGL+  R I  G    L   G   +E+      ++ R+      
Sbjct: 200 PEVRR-EPCIALDGGFDGLAVLRRIVSGAPGRLVPGGALLLEMHERHLDELPRLCLQAGF 258

Query: 245 FLVNAFKDYGGNDRVLL 261
               A +D  G  R+++
Sbjct: 259 ERAEARRDLAGLPRLVV 275


>gi|229917063|ref|YP_002885709.1| modification methylase, HemK family [Exiguobacterium sp. AT1b]
 gi|229468492|gb|ACQ70264.1| modification methylase, HemK family [Exiguobacterium sp. AT1b]
          Length = 286

 Score =  103 bits (258), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 119/237 (50%), Gaps = 14/237 (5%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D+  RF     I R L  E +  ++G   FY     ++ D   PRPETE L+D  L   L
Sbjct: 51  DEAARF--EAGIERLLMGEPVQHVIGHAPFYGRSFEVNRDVLIPRPETEELIDWVLG-QL 107

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             ++  ++V   D+GTG+GA+ + L  E    +   VDIS +A+E+AK NA   G + +F
Sbjct: 108 RHVKDDEIV---DVGTGSGAIAITLSLELG-VRVQTVDISREAIEVAKRNAAALGATVQF 163

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + D  + + +    V+VSNPPYIE+   + L   V  ++P ++L GG DGL  YR +
Sbjct: 164 --YEGDGLAPIADHSIRVLVSNPPYIEA--DELLDETVVGYEPHLALFGGKDGLDMYRQL 219

Query: 210 ADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
                R L  D  L + EIGYNQ  DV  +   R         KD  G DR++   R
Sbjct: 220 IAESVRVLRADWHLIAFEIGYNQGQDVKSLLSERYPEAETGILKDINGKDRIVYAVR 276


>gi|224500714|ref|ZP_03669063.1| hypothetical protein LmonF1_13996 [Listeria monocytogenes Finland
           1988]
          Length = 283

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A  F    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTASDISAPALV 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A+ NA+      RF   D L++  F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 150 VARKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 208 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|186683987|ref|YP_001867183.1| HemK family modification methylase [Nostoc punctiforme PCC 73102]
 gi|186466439|gb|ACC82240.1| modification methylase, HemK family [Nostoc punctiforme PCC 73102]
          Length = 296

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 109/220 (49%), Gaps = 12/220 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L  + I  +  WR+F   ++ +SS    PRPETE L+D ALA +             DLG
Sbjct: 81  LPVQYIAGVTPWRNF---QIAVSSAVLIPRPETECLIDLALAAA-----SGVSGYWADLG 132

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VE 162
           TG+GA+ + L    P      VD S +AL IA++NA   G ++R    Q  W+     ++
Sbjct: 133 TGSGAIAIGLADVLPKATIHAVDYSLEALAIAQANARNLGFADRIKFYQGSWWEPLTFLK 192

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G F  +VSNPPYI +  +  L  EV + +P ++LDGG DGL   R + +    +L   G+
Sbjct: 193 GQFSGMVSNPPYIPTSTLSSLQPEVVNHEPHLALDGGADGLDCIRHLIEISPSYLQPGGV 252

Query: 223 CSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
             +E+   Q   V  + +S+  +  +    D  G +R  L
Sbjct: 253 WLIEMMAGQADAVRELLQSQGSYCKIQIHADLAGIERFAL 292


>gi|332687008|ref|YP_004456782.1| methylase of polypeptide chain release factors [Melissococcus
           plutonius ATCC 35311]
 gi|332371017|dbj|BAK21973.1| methylase of polypeptide chain release factors [Melissococcus
           plutonius ATCC 35311]
          Length = 279

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 111/213 (52%), Gaps = 15/213 (7%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY +   ++  T  PRPETE LVD  L     +  +     I+D+GTGTGA+ +
Sbjct: 73  LLGETEFYGLPFLVNEHTLIPRPETEELVDYCL-----KENEAAYSTIVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVS 170
           +L    P ++  G+DIS +AL +A+ NA    ++   D L  D    +       D+I+S
Sbjct: 128 SLKHARPQWQVTGIDISKQALIVAQENAKI--LNTTIDFLSGDLLEPLMMNGQKVDMIIS 185

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI     + +   V  ++P ++L    +GL+ Y+ +A+   + L +DG   +EIG+ 
Sbjct: 186 NPPYISKAEKNWMDRSVIKYEPALALFADQNGLAIYQRLAEEAKKVLKEDGKIYLEIGFQ 245

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRVL 260
           Q   V  IF+     K  ++   KD   NDR++
Sbjct: 246 QGKAVQEIFQQAFPTKQIIIK--KDLAKNDRIV 276


>gi|269215989|ref|ZP_06159843.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC
           700122]
 gi|269130248|gb|EEZ61326.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC
           700122]
          Length = 329

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 40/298 (13%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++    D  L   +R  L +A+ R    E +  I G   F  + L 
Sbjct: 30  AQHLLSFATGLSRIELYAHHDRPLSPDERDTLRDAVRRRAAGEPLQYIQGTAPFRFIELE 89

Query: 67  LSSDTFEPRPETELLVDSAL-------AF------------SLPRIEKRDV--------- 98
           ++     PRPETE+LVD A        A+            SLP  E             
Sbjct: 90  VAPGVLIPRPETEVLVDEAFRELKNLGAYAVRRPGPHAGEPSLPPSEGAAASGSARPGVA 149

Query: 99  ----------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                     + + D+ TG+G +  A+  E P  + V  DIS  A+ +A+ N    G+ +
Sbjct: 150 AEANGTHAGGLVVADVCTGSGCIACAIASEHPDARVVATDISPDAVALARRNVARLGLGD 209

Query: 149 RFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R D  + D  +  + +  FD+++SNPPY+ + +++ +  EV  F+P ++LDGG DGL  +
Sbjct: 210 RVDVREGDLCAPLAADAPFDLVISNPPYVPTAVLNDMPREVSVFEPALALDGGCDGLDAF 269

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R + D     L+  G+ + E+  +       +  S  L  V    D  G  RVL+  +
Sbjct: 270 RRLIDEAVPLLSFPGVLACELHEDCLDKAADLARSAGLARVRIASDLAGRSRVLIAAK 327


>gi|229153492|ref|ZP_04281670.1| Protein hemK [Bacillus cereus m1550]
 gi|228630096|gb|EEK86747.1| Protein hemK [Bacillus cereus m1550]
          Length = 283

 Score =  103 bits (257), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|281356724|ref|ZP_06243215.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Victivallis vadensis ATCC BAA-548]
 gi|281316851|gb|EFB00874.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Victivallis vadensis ATCC BAA-548]
          Length = 282

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 107/217 (49%), Gaps = 10/217 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  +LG   F ++ L ++     PRPETELL + A+   LP     +   +LD
Sbjct: 64  RRANREPLQYLLGVAYFMDLELEVTPAVLIPRPETELLAEYAVK-HLP-----EGGSMLD 117

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LA+  E P  +   VD+S  ALE+A+ N V  G   RF  LQSD FS + G
Sbjct: 118 LGTGSGAIALAVAAERPDVRITAVDVSSDALEVARRNRVRCGGEVRF--LQSDLFSELPG 175

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD++ +N PY+       L  EVR F+P+++L     G       A  ++ HLN  G 
Sbjct: 176 ERFDLVGANLPYVTQEEYPALEPEVRLFEPQLALTAPDGGFRLIERAARELADHLNPGGR 235

Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
              E+   Q   +  +F     F  ++   DY   DR
Sbjct: 236 AIFELSPPQAPRLAELFVKLGGFDEIDVLADYTRRDR 272


>gi|30023359|ref|NP_834990.1| modification methylase, HemK family [Bacillus cereus ATCC 14579]
 gi|228961592|ref|ZP_04123201.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|229112742|ref|ZP_04242275.1| Protein hemK [Bacillus cereus Rock1-15]
 gi|229130578|ref|ZP_04259534.1| Protein hemK [Bacillus cereus BDRD-Cer4]
 gi|229147869|ref|ZP_04276210.1| Protein hemK [Bacillus cereus BDRD-ST24]
 gi|296505753|ref|YP_003667453.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
 gi|29898920|gb|AAP12191.1| Methyltransferase [Bacillus cereus ATCC 14579]
 gi|228635519|gb|EEK92008.1| Protein hemK [Bacillus cereus BDRD-ST24]
 gi|228652917|gb|EEL08799.1| Protein hemK [Bacillus cereus BDRD-Cer4]
 gi|228670723|gb|EEL26034.1| Protein hemK [Bacillus cereus Rock1-15]
 gi|228798074|gb|EEM45078.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|296326805|gb|ADH09733.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
          Length = 283

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEIFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|228911167|ref|ZP_04074973.1| Protein hemK [Bacillus thuringiensis IBL 200]
 gi|228848530|gb|EEM93378.1| Protein hemK [Bacillus thuringiensis IBL 200]
          Length = 283

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 123/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKSLGAEVTFYHGDLLSP--FDKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|33863927|ref|NP_895487.1| SAM-binding motif-containing protein [Prochlorococcus marinus str.
           MIT 9313]
 gi|33635511|emb|CAE21835.1| hemK family protein [Prochlorococcus marinus str. MIT 9313]
          Length = 306

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 122/246 (49%), Gaps = 15/246 (6%)

Query: 21  QVIVDPD-SVLDDRQRFFLTNAIVRSLKHE-SIHRILG---WRDFYNVRLTLSSDTFEPR 75
           Q+ +DP  SVL +R    L     + L H   +  ++G   WRDF    L +S+    PR
Sbjct: 45  QLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHLIGYCPWRDF---ELEVSAVALIPR 101

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            ETELLVD    F+L  + ++   R  DLGTG+GA+ +AL +  P ++G  VD S +AL 
Sbjct: 102 QETELLVD----FALQALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALA 157

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK N         +   Q  W+  +    G F +++ NPPYI  V++  L   VRD +P
Sbjct: 158 LAKRNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEP 217

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            ++L GG DGL   R I  G  + L   G   +E  ++Q   V+ +   + L  V+   D
Sbjct: 218 HLALYGGADGLVATRQIIAGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSD 277

Query: 253 YGGNDR 258
             G  R
Sbjct: 278 LLGVRR 283


>gi|228949049|ref|ZP_04111321.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228810622|gb|EEM56971.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 283

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + +K   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLYVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++++P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|88608405|ref|YP_506028.1| HemK family modification methylase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600574|gb|ABD46042.1| modification methylase, HemK family [Neorickettsia sennetsu str.
           Miyayama]
          Length = 289

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 135/261 (51%), Gaps = 12/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  L+  Q+I+  +  + D Q       +++  K  S+  I+G ++F+    
Sbjct: 36  DAELLLAHVLSLNREQLILYCNEGMTDSQAMDF-EMLLKLRKSHSVAAIVGEKEFWKHSF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ D   PRP+TE ++ + L+    R +K    ++I++LGTG+G V +++LKE     G
Sbjct: 95  AVNKDVLIPRPDTETMLVALLS----RYKKLTQPLKIVELGTGSGCVIISILKEFRNALG 150

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181
            G + S  A  +   N +  G+  R    +  + S++  L    DVIVSNPPY+    + 
Sbjct: 151 FGFEKSRAAFYLTMHNMLKYGLRARLKLYRLGFESAMRVLSCKVDVIVSNPPYVRRGEIP 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L LEV++ +PRI+LDGG +G+  Y +I    S+ L   G   +EIG + +  VV     
Sbjct: 211 YLQLEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGSSWRDSVVSANYP 269

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
            K  +V  ++D  G +R+L+ 
Sbjct: 270 FK--IVERYRDLSGIERILVL 288


>gi|138896953|ref|YP_001127406.1| HemK family modification methylase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249771|ref|ZP_03148467.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. G11MC16]
 gi|134268466|gb|ABO68661.1| Modification methylase, HemK family [Geobacillus
           thermodenitrificans NG80-2]
 gi|196210647|gb|EDY05410.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. G11MC16]
          Length = 288

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 112/226 (49%), Gaps = 10/226 (4%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103
           ++ H  I  ++G   FY  R  ++     PRPETE LV   L   LPR+ E R+ + ++D
Sbjct: 65  AVDHVPIQYLIGHEWFYGRRFLVNRHVLIPRPETEELVLGVLE-RLPRLFEGRERIDVVD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+GA+ + L  E+        DIS +AL +A+ NA   G   R   L+ D    +  
Sbjct: 124 VGTGSGAIAVTLALENRTLSVTATDISEEALTVARENAERLGA--RISFLRGDLLQPLIE 181

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +G   DV+VSNPPYI       L   V+D++P  +L GG DGL  YR  A  +   L   
Sbjct: 182 QGQTVDVVVSNPPYIPETDAATLSPVVKDYEPHTALFGGRDGLDFYRRFARDLPLVLGTP 241

Query: 221 GLCSVEIGYNQKVDVVRIFESR--KLFLVNAFKDYGGNDRVLLFCR 264
            L + E+G  Q   V  +  +   +  +  AF D  G DR++   R
Sbjct: 242 ALAAFEVGAGQGEAVASLLAAAFPEAEIEVAF-DLNGKDRMVYMTR 286


>gi|313203843|ref|YP_004042500.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific
           [Paludibacter propionicigenes WB4]
 gi|312443159|gb|ADQ79515.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paludibacter propionicigenes WB4]
          Length = 282

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 9/257 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S+  + ++TG S  ++IV+ +++  D Q   +   I +  K+  I  ILG  +F+ +   
Sbjct: 25  SYLIIEKLTGFSRTEIIVNKNTLFSDEQHHVIETFIEKLKKNVPIQYILGETEFFGLTFN 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+   + +     +   + ILD+GTG+G + ++L  E P      
Sbjct: 85  VNESVLIPRPETEELVEWIRSEN----NRSADLNILDIGTGSGCIAISLKHEFPNASVHA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS +AL  A+SN   N +   F           E  +D+IVSNPPY+       +   
Sbjct: 141 FDISEQALNTARSNVERNKLDVTFSRTNILNAPKTEQRWDIIVSNPPYVTEQEKSSILPN 200

Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           V + +P ++L   D   D L  YR+IA     HL   G    EI  +  V+ V +     
Sbjct: 201 VLEHEPHLALFVPDN--DPLLFYRSIALFAKHHLKPQGKLYFEINRSFGVETVELLTDLG 258

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   KD  GNDR++
Sbjct: 259 FCNVELRKDISGNDRMV 275


>gi|91070576|gb|ABE11479.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone HOT0M-7C8]
          Length = 289

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 9/220 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + +SL  + +  I  WRD   ++L ++     PRPETEL++D        + +K   +  
Sbjct: 69  LFKSLPIQYLCGITFWRD---LKLKVTDKVLIPRPETELIIDIVFKIFGKQSQK---LFF 122

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158
            +LGTG+GA+ +AL    P + G+  DIS  AL+IA  N +              W   F
Sbjct: 123 AELGTGSGAISIALALAYPSWNGIATDISQDALDIATKNYINCSKYTNLKFYCGHWWTPF 182

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            S +G  D+ +SNPPYI     + L  EV++F+P I+L GG DGL H   I       L 
Sbjct: 183 GSFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPEIALLGGEDGLKHITEIIQKAPLFLK 242

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + G   +E  ++Q   V ++    K   V    D  G  R
Sbjct: 243 EKGWLILENHFDQGEKVKQLLIKSKFKSVEIVNDLSGVGR 282


>gi|189499813|ref|YP_001959283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium phaeobacteroides BS1]
 gi|189495254|gb|ACE03802.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium phaeobacteroides BS1]
          Length = 297

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 105/221 (47%), Gaps = 7/221 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDL 104
           LK   +  I G + FY    ++      PRPETELL + AL  +            ILD+
Sbjct: 72  LKGRPLQYITGEQIFYGYSFSVDERVLIPRPETELLFEYALERWQAGAPAPESGPEILDI 131

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFS 159
           GTG+G + +      P  +   VD+S +ALEIA  NA  +GV+ER   +QSD     +  
Sbjct: 132 GTGSGCLAVLFAITVPDARITAVDVSAEALEIAALNAEKHGVTERIRFVQSDALHPGFSE 191

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G +D+IVSNPPYI       L  EV++++P+I+L    DG + Y  I    S  L  
Sbjct: 192 KLAGRYDLIVSNPPYIPESEWSALQKEVKEYEPKIALTIS-DGFAFYHAITRSASALLRA 250

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G+   E+  +    V           +   KDY G DRV+
Sbjct: 251 GGVLCFELHADGASVVSGSMRDGGYEGIAVQKDYAGLDRVI 291


>gi|283782509|ref|YP_003373264.1| modification methylase, HemK family [Pirellula staleyi DSM 6068]
 gi|283440962|gb|ADB19404.1| modification methylase, HemK family [Pirellula staleyi DSM 6068]
          Length = 292

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +    D V+ D  R      + +  +   +  ++G R+FY++ L
Sbjct: 31  DAEVLLASAQGCERIMLYTMFDQVVADDVRAKFRELVKKRGEGVPVAYLVGKREFYSLPL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++SD   PRPETEL+V +A+ F   + +      ++D+GTG+GA+ LA+ K     +  
Sbjct: 91  RVTSDVLIPRPETELVVMTAIDFI--KAKAIAAPAVIDVGTGSGAIALAIAKNMKTAQVT 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
            VD+S  AL +AK NAV N +  R   ++S+    +     FDVI +N PY+     + L
Sbjct: 149 AVDVSPAALAVAKQNAVDNKLEARVTLIESNLLGEIPAATKFDVIAANLPYVSDAEYEEL 208

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V+ F+P+++L GG  G      +    +  +    L  +E+       VV + ++  
Sbjct: 209 PHSVKAFEPKLALVGGTSGSELIEKLLPQAAERMQPGALLLLELSPMLAEKVVALLKADS 268

Query: 244 LFL-VNAFKDYGGNDRVLLFCR 264
            F  V + KD  G+ RV+   R
Sbjct: 269 RFEGVESLKDLAGHARVIRATR 290


>gi|152977514|ref|YP_001377031.1| HemK family modification methylase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026266|gb|ABS24036.1| modification methylase, HemK family [Bacillus cytotoxicus NVH
           391-98]
          Length = 283

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 10/235 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    + + Q       I + +    +  ++G+  FY     ++ +
Sbjct: 28  LCHVLNTNRTGLMMNMREEISNEQEKRFKELIHKHIDGMPVQYLMGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RI++      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIQRNFGNQELHVADIGTGSGAISITLALENQNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA + G +  F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKQNATSLGANVTFYHGDLLSPFYETGKKL-DVVVSNPPYIPEEDWKGLSS 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            V++ +P+ +L GG DGL  YR   + + R L K  L + E+G  Q  DV  + E
Sbjct: 203 VVKEHEPKRALVGGADGLDFYRRFMEELPRVLQKKALVAFEVGVGQGEDVKGLLE 257


>gi|312142773|ref|YP_003994219.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium sp. 'sapolanicus']
 gi|311903424|gb|ADQ13865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium sp. 'sapolanicus']
          Length = 286

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +  +    + V  D  L +++       + +  K   +  I G ++F ++  
Sbjct: 25  DAEVLMAELLDMERINLYVKYDYPLKEKEIKNYREMVKKRAKRIPLAYITGKKEFMSLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS     PRP+TE LV+  +++   R  + +  +I+D+G G+GA+ ++L       + V
Sbjct: 85  DLSEAVLIPRPDTENLVEEVISYC--RENELEKPQIIDVGCGSGAISVSLGYYLEDARVV 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVD 181
           G DIS  AL+IA+ N     + ER   +QSD             D++VSNPPYI    + 
Sbjct: 143 GSDISKAALKIARHNLKKFELEERVSVVQSDLLREFIKRDIAEIDIVVSNPPYISEKEMA 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  +PR +L+ G  GL  Y+ +     + L K+G+  +EIG  Q   V+ IF+ 
Sbjct: 203 ELAPEVKK-EPRTALEAGKKGLDFYKKLIPQAEKVLKKEGMLFLEIGSRQAEAVLDIFDE 261

Query: 242 RKLFLVNAFKDYGGNDRVL 260
               L    KDY  +DR++
Sbjct: 262 NWSEL-EIIKDYADHDRIV 279


>gi|317130772|ref|YP_004097054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cellulosilyticus DSM 2522]
 gi|315475720|gb|ADU32323.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cellulosilyticus DSM 2522]
          Length = 290

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTG 109
           +  I+G   FY     ++S+   PRPETE L+++ L       + +   +RI+D+GTG+G
Sbjct: 72  VQHIIGHEQFYGRDFKVNSNVLIPRPETEELIEALLGKIKSLFLNREQPIRIVDVGTGSG 131

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFD 166
            + + L  E        VDIS  AL++A+SNA   G    F   D L+     S E  FD
Sbjct: 132 IIAITLALEVVHSHVHAVDISQAALDVARSNATALGAKVTFHEGDLLEPFLAESSE--FD 189

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++SNPPYI       +   V D +P ++L  G DGL+ YR +   +   L+K GL + E
Sbjct: 190 IVISNPPYIPEGDRAIMKENVLDHEPALALFAGQDGLTIYRKLIKQIPFVLHKKGLVAFE 249

Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
           IG+ Q   V  +  +      +    D  G +R+++
Sbjct: 250 IGHGQGESVKALLAAEYPAADIAVLNDINGKERIVI 285


>gi|257060964|ref|YP_003138852.1| modification methylase, HemK family [Cyanothece sp. PCC 8802]
 gi|256591130|gb|ACV02017.1| modification methylase, HemK family [Cyanothece sp. PCC 8802]
          Length = 300

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 107/214 (50%), Gaps = 11/214 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114
           WR+F    L +S     PRPETEL++D A+  ++    + D+     +DLGTG+GA+   
Sbjct: 90  WRNF---SLKVSPSVLIPRPETELIIDFAVK-AVKDSPRNDLALGHWVDLGTGSGAIACG 145

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L +  P      VD S  AL IA+ NA   G S R +  Q  W++ +E   G    ++SN
Sbjct: 146 LAQAFPKAIIHAVDSSEAALVIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSN 205

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + ++  L  EVRD +P ++LDGG DGL   R + +    +L   G+  VE+   Q
Sbjct: 206 PPYIPTKMLSELAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQ 265

Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDR-VLLFC 263
              V ++      +  +    D    DR  L +C
Sbjct: 266 GEKVAQLLTDSTAYKDIKILSDLAEIDRFALAYC 299


>gi|218900454|ref|YP_002448865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus G9842]
 gi|218544940|gb|ACK97334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus G9842]
          Length = 283

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|228968457|ref|ZP_04129446.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228791237|gb|EEM38850.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 283

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKAGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|68171900|ref|ZP_00545223.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658386|ref|YP_507848.1| HemK family modification methylase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998675|gb|EAM85404.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599843|gb|ABD45312.1| modification methylase, HemK family [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 280

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 5/211 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I+G R+F++    ++SD  +PRP++E ++ S  A   P   +R ++   D GTG+G 
Sbjct: 71  ISHIIGKREFWSTDFIVNSDVLDPRPDSETIISSVFAM-YPCKNRRLIIG--DFGTGSGC 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +   LL       G+ ++ S KA  +A  N   +G+  R     S W ++    FD+IVS
Sbjct: 128 LLSILLLRYRNAVGIAIEKSVKAYRVAYQNFKNHGLYSRIKMRLSSW-NTCYDTFDLIVS 186

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI    +  L  EV+  +P ++LDGG  GL  Y  I   + R L ++G+  +EIG +
Sbjct: 187 NPPYIRRSKITTLQPEVKLHEPMVALDGGPIGLEIYSQIFVIIKRCLKQNGVAILEIGED 246

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           Q   + RI     L       D  G  R ++
Sbjct: 247 QH-QIHRIVHRYGLKFCTYHNDLSGKLRCIV 276


>gi|124265715|ref|YP_001019719.1| hemK protein [Methylibium petroleiphilum PM1]
 gi|124258490|gb|ABM93484.1| hemK protein [Methylibium petroleiphilum PM1]
          Length = 275

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       ++   D  LD +        + R    E +  +LG ++F+ +RL
Sbjct: 23  DAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGLRL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR +TE LV+ AL      +E      + DLGTG+GA+ LAL    P  +  
Sbjct: 83  EVTPDVLIPRADTETLVEWALELLPCNVE----TAVADLGTGSGAIALALAARRPTCRVT 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            VD S  AL +A+ N    G++  +    SDWFS++EG  F +IVSNPPYI     DC  
Sbjct: 139 AVDASSDALAVAERNGGRLGLAVEWRL--SDWFSALEGRRFALIVSNPPYIAD--GDC-H 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L+    +P+ +L  G DGL+  R I    +  L   G   +E GY+Q   V  +      
Sbjct: 194 LDALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQAEAVQALLGVAGF 253

Query: 245 FLVNAFKDYGGNDR 258
             +    D GG  R
Sbjct: 254 EHIATRHDLGGQPR 267


>gi|159902894|ref|YP_001550238.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9211]
 gi|159888070|gb|ABX08284.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9211]
          Length = 293

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 13/191 (6%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           ++E +  ++G   WRDF   +L ++S  F PR ETE+LV+     +L +     V R  D
Sbjct: 76  ENEPLQYLVGKCPWRDF---QLEINSSVFIPRQETEILVE----LALKKCNGISVGRWAD 128

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           LGTG+G + +AL +  P + G  VD S  AL +AK N      +         W+  ++ 
Sbjct: 129 LGTGSGVLAVALARSLPGWIGDAVDCSKDALSLAKKNLANLANNSHVHFHLGHWWQPLKS 188

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G +D++++NPPYI S ++  L   VRD +P ++L GG+DG++  R I  G  + L   
Sbjct: 189 WWGTYDLVLANPPYIPSAVLSELHPIVRDNEPHLALSGGLDGMNCCREIIRGAKKGLGTG 248

Query: 221 GLCSVEIGYNQ 231
           G    E  Y+Q
Sbjct: 249 GWLIFEHHYDQ 259


>gi|126653460|ref|ZP_01725556.1| modification methylase, HemK family protein [Bacillus sp. B14905]
 gi|126589816|gb|EAZ83949.1| modification methylase, HemK family protein [Bacillus sp. B14905]
          Length = 286

 Score =  103 bits (256), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)

Query: 1   MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46
           M+AL  + SFL                + G S  +V++     L + Q+      I   +
Sbjct: 8   MEALEWASSFLVDNGREQTAARIVMQHILGTSYSEVMLHLQDKLTEEQQVKFKALIEEHV 67

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
               +   +G  +FY     +      PRPETE L+   +   + ++ +   +++ D+GT
Sbjct: 68  NGRPVQYCVGSEEFYGRSFIVDESVLIPRPETEELILGTIN-RMTKLFQHQALKVADIGT 126

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165
           G+GA+ +++  E P    V  D+S  AL  A+ NA    +    D    D  + + G  F
Sbjct: 127 GSGAIAISMKLECPALTVVATDLSEDALATAQKNA--QRLEADIDFRLGDLTAPLAGEKF 184

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+I+SNPPYI     + +   V   +P  +L    DGL  YR +A+ +  ++NK  L  +
Sbjct: 185 DIILSNPPYIAFDEAEAMSDVVLKHEPHSALFAEEDGLILYRQLAEQLPMYMNKPALIGL 244

Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264
           EIGY Q   V + F+ S     ++  KD  G  R ++FC 
Sbjct: 245 EIGYTQGEKVAKFFQDSFPQATISIEKDINGKPR-MIFCE 283


>gi|319945453|ref|ZP_08019713.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599]
 gi|319741239|gb|EFV93666.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599]
          Length = 297

 Score =  103 bits (256), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 111/215 (51%), Gaps = 6/215 (2%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV-VRILDLGT 106
           E +  +LG ++FY     +S     PR +TE LV++AL   +L R ++R V + +L+LGT
Sbjct: 74  EPLAYLLGQQEFYGRPFAVSPAVLIPRADTETLVETALEQLTLLRQQRRAVPLSLLELGT 133

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164
           G+G + + L  E+P  +   V+ S +AL +A+ NA   G ++R       W+ ++     
Sbjct: 134 GSGIIAITLALEAPDTEVHAVERSPEALAMAQQNAKALG-ADRIHWHAGSWWQALASPRH 192

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+IVSNPPYI +        ++R F+P  +L  G DGL   R I  G   HL+  G   
Sbjct: 193 FDLIVSNPPYIAAGDHHLQQGDLR-FEPPQALAAGPDGLDDLRIIIGGAPAHLSPGGWLL 251

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           +E GY+Q+  V  +        V   +D  G  RV
Sbjct: 252 LEHGYDQEAPVQALLRDAGFAEVFTRRDLAGQPRV 286


>gi|194334390|ref|YP_002016250.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prosthecochloris aestuarii DSM 271]
 gi|194312208|gb|ACF46603.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prosthecochloris aestuarii DSM 271]
          Length = 297

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 6/222 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + L+   +  + G + FY     +      PRPETEL+V+ A+        +   + ILD
Sbjct: 70  KRLQGWPVQYLTGEQYFYGRVFKVDPRVLIPRPETELVVEHAIERLRGCGGEGSQLSILD 129

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+G + +    + P  +   +D S +AL++A+ NA + GV  R   LQ+D  +    
Sbjct: 130 IGTGSGCIAVTAALQLPGARITAIDCSAEALDVARENARSYGVETRIRFLQADMLAPEFL 189

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              E  +D+I++NPPYI     D L  EVR+ +PR++L     GL  YR +A      L 
Sbjct: 190 EDDEAAYDLIIANPPYIPDSEWDDLQAEVREHEPRVALTTA-SGLECYRAVAARAPSLLC 248

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + G+   E+       V  + +      +   KDYGG DR+L
Sbjct: 249 QSGILCFELHAEGAGAVSVLMKENGFGDILLHKDYGGYDRIL 290


>gi|75762681|ref|ZP_00742520.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903803|ref|ZP_04067919.1| Protein hemK [Bacillus thuringiensis IBL 4222]
 gi|228942475|ref|ZP_04105012.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228975407|ref|ZP_04135963.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228982044|ref|ZP_04142337.1| Protein hemK [Bacillus thuringiensis Bt407]
 gi|74489827|gb|EAO53204.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228777708|gb|EEM25982.1| Protein hemK [Bacillus thuringiensis Bt407]
 gi|228784389|gb|EEM32412.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228817217|gb|EEM63305.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228855830|gb|EEN00374.1| Protein hemK [Bacillus thuringiensis IBL 4222]
 gi|326943126|gb|AEA19022.1| modification methylase, HemK family [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 283

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FDKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|58583267|ref|YP_202283.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625103|ref|YP_452475.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575429|ref|YP_001912358.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58427861|gb|AAW76898.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369043|dbj|BAE70201.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519881|gb|ACD57826.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 281

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 9/222 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S  T  PR +TELLV+     +L R++     R 
Sbjct: 61  VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERLDTSPGRRA 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA  + +    D    +WF+ +
Sbjct: 117 ADLGTGSGAIALAIASERPQSQLIATDASAAALGMARRNADRHSLPN-VDFRLGNWFAPL 175

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL   
Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGNDGLDDIRLIVADAPAHLLPG 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVLL 261
           G   +E G++Q  D VR   +   F   A ++D    DRV L
Sbjct: 235 GWLLLEHGWDQG-DAVRALLAASGFDAAATYQDLEARDRVTL 275


>gi|116493077|ref|YP_804812.1| methylase of polypeptide chain release factor [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103227|gb|ABJ68370.1| Methylase of polypeptide chain release factor [Pediococcus
           pentosaceus ATCC 25745]
          Length = 283

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 112/227 (49%), Gaps = 11/227 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
              A+ R  K E +  +     F+     +      PR ETE LV++ L+ +      R 
Sbjct: 59  FQTAVKRVAKGEPVQYVTNKATFFGREFYVDKRVLIPRVETEELVETILSKTK---RSRQ 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQS 155
            +R+LD+GTG+G + + L  E P +    VDIS  AL +A+ NA ++   V  R  +L  
Sbjct: 116 RLRVLDIGTGSGDIAITLKLERPEWLVTAVDISKDALTVAQRNAESHEAIVDFRLGSL-- 173

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             F  V+G  FD+I+SNPPYI       +   V DF+P  +L     GL  Y+ IAD + 
Sbjct: 174 --FEPVQGERFDLIISNPPYIADNEKHEMDQSVIDFEPHQALFADDHGLFWYKRIADQLD 231

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
           ++L + G    EIGY Q  D+ + F E + +      KD   +DR+L
Sbjct: 232 QYLVEHGELGCEIGYRQGTDLKKYFLEKKYIDQAEVIKDLSQHDRIL 278


>gi|188589649|ref|YP_001919882.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E3 str. Alaska E43]
 gi|188499930|gb|ACD53066.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E3 str. Alaska E43]
          Length = 288

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 15/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       +I   +  +D          I +  +   +  IL   +F N+  
Sbjct: 29  DAELLLGKVLNKEKIYLITHREEKIDKVNEEKYMKLISKRKEKMPVKYILNECEFMNMNF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE+LV+  L      I++ D  +I DL  G+GA+ ++L   +   K +
Sbjct: 89  YVEPGVLIPRADTEILVEEVLK----NIDENDSKKICDLCCGSGAIGISL---ANLRKNI 141

Query: 126 GVDISCKALEIAKSNAVTN----GVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
            VD+     EI +   + N     + +R + ++SD  +        +D+IVSNPPYIE  
Sbjct: 142 NVDL-IDYYEIPEKVTLINIKKYDILDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEEC 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  +V++++P  +L GG DGL  Y+ I +     LN+ G+ + EIGYNQ   V  +
Sbjct: 201 EINDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKEL 260

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
            E +    V   KD  G DRV++
Sbjct: 261 MEEKNFIEVKIVKDLAGLDRVVI 283


>gi|163788596|ref|ZP_02183041.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium
           ALC-1]
 gi|159875833|gb|EDP69892.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium
           ALC-1]
          Length = 492

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 26/275 (9%)

Query: 6   DSHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           DS  FLC      L   Q+ ++P+  L+  +       +    + + I  ILG  +FY +
Sbjct: 24  DSFFFLCTEHYLNLPRFQLSLEPEFTLNKSETGIFFKVLEDLNQQKPIQYILGETEFYGL 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ +   PRPETE LVD  + +   + E+  + RILD+GTG+G + ++L K  P  +
Sbjct: 84  PFKVNENVLIPRPETEELVDLIIKYHSEQSEESQL-RILDIGTGSGCIAISLAKNLPSAE 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF---DTLQ--SDWF-------SSVEGLFDVIVSN 171
              +D+S  AL+IAK NA  N VS  F   D L+  +D F            +FD+IVSN
Sbjct: 143 VYALDVSEDALKIAKQNADLNNVSINFIETDILKISNDSFFWKDITLQQKRLVFDIIVSN 202

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEI--- 227
           PPY+ ++    +   V D +P ++L    D  L  Y+ I +    +L   G    EI   
Sbjct: 203 PPYVRNLEKQEIKPNVLDNEPHLALFVEDDNPLLFYKEITNFAIDNLKPKGELYFEINQY 262

Query: 228 -GYNQKVDVVRI-FESRKLFLVNAFKDYGGNDRVL 260
            G+  K  +V   FE+ +L      KD  GNDR+L
Sbjct: 263 LGHETKALLVNANFENMEL-----LKDLNGNDRML 292


>gi|193213221|ref|YP_001999174.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobaculum parvum NCIB 8327]
 gi|193086698|gb|ACF11974.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobaculum parvum NCIB 8327]
          Length = 294

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 8/221 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDL 104
           L+   +  I G   FY  R  +      PRPETEL+++ A+   +   ++  D   ILD+
Sbjct: 71  LQGRPVQYIAGESFFYGYRFFVDERVLIPRPETELVLEHAIERLAASGLDSVDTPSILDI 130

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFS 159
           GTG+G + + L    P  +   +D+S  ALE+A+ NA  +GVS+R   +Q+D     +  
Sbjct: 131 GTGSGCIAITLALRLPGAQVTALDVSADALEVARRNAEEHGVSDRIRFVQADALDLAFAQ 190

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
              G FD+++SNPPYI       L  EV+ ++PR++L     G   YR+I       L K
Sbjct: 191 KAGGPFDLVISNPPYIPESEWATLQKEVKGYEPRLALVSPT-GFEFYRSIVATAPALLRK 249

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G+   E+ +    + V+     +   V   +DY   DR L
Sbjct: 250 GGVLCFEL-HADGAEGVKKLLGHEFRDVQVMQDYSRLDRAL 289


>gi|319956158|ref|YP_004167421.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Nitratifractor salsuginis DSM 16511]
 gi|319418562|gb|ADV45672.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitratifractor salsuginis DSM 16511]
          Length = 270

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 119/257 (46%), Gaps = 19/257 (7%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H   C  T L     ++     L   + FF    I R   HE I  I     FY+    
Sbjct: 30  AHHLGCERTSL-----LLREGETLPREEEFFAL--IERRKAHEPIEYITNEVSFYSETFY 82

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S    PRPETELLV+         I ++ + RI ++G G+GA+ + L +  P  K V 
Sbjct: 83  IASGALIPRPETELLVEEVAHL----IREKGLKRIAEIGVGSGALSVTLARIFPELKIVA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS +AL IA  NA   GV +R +  QS     VE + ++IVSNPPYI +     L   
Sbjct: 139 TDISPEALSIAGVNAERFGVKDRIELRQSSLLDGVEAV-EMIVSNPPYIPAGTE--LEPN 195

Query: 187 VRDFDPRISLDGGIDGLSHYRTIA-DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++P  +L    DG    R I   G  R +      + E+GY+Q+  +   F+ + + 
Sbjct: 196 VADYEPETALYAPGDGTDLLRQIVLLGQERGIP----IACEMGYDQRAAMEGFFKEQGIE 251

Query: 246 LVNAFKDYGGNDRVLLF 262
               +KD  G DR  L 
Sbjct: 252 HYRFYKDLAGLDRGFLI 268


>gi|221195021|ref|ZP_03568077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium rimae ATCC 49626]
 gi|221184924|gb|EEE17315.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium rimae ATCC 49626]
          Length = 304

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 11/229 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L   TGLS  ++  + D  L   +   +  A+ +      +  + G   F ++ L    
Sbjct: 34  LLSATTGLSRVELYTNFDKPLMQDELNRMHQAVEQRASGRPLQYVTGEMPFRHIVLKCEP 93

Query: 70  DTFEPRPETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
               PRPETE+LVD AL        +  +    + +R+L++G GTG + L++  E P   
Sbjct: 94  GVLIPRPETEVLVDIALEGIDQKCAAGEKDGTPEPLRVLEVGVGTGCIALSIASERPDTD 153

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVI 179
            V  D+S +A+ +A+ N    G+S+R   ++ D  S V       F V+VSNPPYI + I
Sbjct: 154 VVATDVSPEAISLAQRNCDALGLSDRVHLIECDLVSGVPKEDVERFCVLVSNPPYIPTEI 213

Query: 180 V-DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +   +  EV++F+P+++LDGG DGL  YR +       L   G+  +E+
Sbjct: 214 LKKSVPAEVKEFEPKLALDGGNDGLDVYRRLLQEAPHMLAPGGMLCIEL 262


>gi|228955576|ref|ZP_04117578.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|229181576|ref|ZP_04308902.1| Protein hemK [Bacillus cereus 172560W]
 gi|229193580|ref|ZP_04320524.1| Protein hemK [Bacillus cereus ATCC 10876]
 gi|228589885|gb|EEK47760.1| Protein hemK [Bacillus cereus ATCC 10876]
 gi|228601944|gb|EEK59439.1| Protein hemK [Bacillus cereus 172560W]
 gi|228804104|gb|EEM50721.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
          Length = 283

 Score =  102 bits (255), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           LC V  ++   ++++  + + +D+++ F T  I + ++   I  ++G+  FY     ++ 
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +   PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       
Sbjct: 87  EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           VDI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L
Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +   
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|229064979|ref|ZP_04200277.1| Protein hemK [Bacillus cereus AH603]
 gi|228716280|gb|EEL67992.1| Protein hemK [Bacillus cereus AH603]
          Length = 283

 Score =  102 bits (255), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 123/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + I D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFPR 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AQVEVVFDINGKDRMVF 279


>gi|167838057|ref|ZP_02464916.1| hemK protein [Burkholderia thailandensis MSMB43]
          Length = 251

 Score =  102 bits (255), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 19/249 (7%)

Query: 21  QVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           Q+I   D  LD    +R+    A  R    E I ++ G R+F+ +   ++ D   PRPET
Sbjct: 5   QLITRADEPLDAAAIERYLALEA--RRAAGEPIAQLTGAREFFGLEFDVTPDVLIPRPET 62

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLV++AL      I+      +LDLGTG+GA+ +++    P  +   +D S  AL++A+
Sbjct: 63  ELLVETALDA----IDGIASPCVLDLGTGSGAIAVSIASGRPDARVWALDRSATALDVAR 118

Query: 139 SNA------VTNGVSERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
            NA         G   RF  L+SDW+++++ GL F V+VSNPPYI          ++R F
Sbjct: 119 RNARKLLDPARPGGPLRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-F 175

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +PR +L    DGL+  R I  G    +   G   +E GY+Q   V  +  +     V + 
Sbjct: 176 EPRGALTDERDGLAAIRAIVAGAHAFVAPGGALWIEHGYDQAAAVRALLGAAGFADVESL 235

Query: 251 KDYGGNDRV 259
            D    +R 
Sbjct: 236 ADLASIERA 244


>gi|254448386|ref|ZP_05061847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium HTCC5015]
 gi|198261999|gb|EDY86283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium HTCC5015]
          Length = 275

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 7/257 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC  T  S   +I   +  L+  Q  +  + + R    E I  +LG ++F++
Sbjct: 19  AALDAQLLLCHATNKSRSFLIAHGEEALNAEQAQYFESLVKRRADGEPIAYLLGQQEFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PR +TE L++ +L    P       + I DLG G+G + L L    P  
Sbjct: 79  LPFEVNPHTLIPRADTESLIEHSLQLFGPD----STIDIADLGAGSGCIGLTLAHCLPKA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             + V+ S  AL + + N     ++     ++S+W   + E  FD+I+SNPPY+      
Sbjct: 135 NVLCVERSRDALAMIEKNRQQLNINNA-KAIESNWCQDLGEQHFDLIISNPPYVRENDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R +A  V +HL   G   VE GY+Q   V RI  +
Sbjct: 194 LDQGDVR-FEPITALTAGADGLDDIRQLATQVPKHLKPQGHFIVEFGYDQSEAVKRILSA 252

Query: 242 RKLFLVNAFKDYGGNDR 258
                +    D GG+ R
Sbjct: 253 AGFQSLTDITDLGGHIR 269


>gi|28210062|ref|NP_781006.1| methyltransferase [Clostridium tetani E88]
 gi|28202497|gb|AAO34943.1| methyltransferase [Clostridium tetani E88]
          Length = 292

 Score =  102 bits (254), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%), Gaps = 17/219 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG  +F  +   +      PRP+TE+LV+ ++      I K     I D+  G+G 
Sbjct: 76  IKYILGICEFMGLSFKIREGVLIPRPDTEILVEKSIEI----IRKNHYKNISDVCCGSGI 131

Query: 111 VCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVE 162
           + +++   + F   V V   D+    L++ + N   N +  +    +S+       +S++
Sbjct: 132 IGISI---ATFVDKVNVECFDVEEIPLKVTEENIKLNRLEGKVKVFKSNLLEYAIKNSIK 188

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPYI+   +  L  +V++++P I+LDGG DGL  Y+ I       LN  G 
Sbjct: 189 --YDMIVSNPPYIKKREITNLMEDVKNYEPHIALDGGEDGLYFYKNIVKQSKHLLNSGGT 246

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            + EIGY+QK +V  I ES     +  +KD  G DRV++
Sbjct: 247 IAFEIGYDQKEEVSCILESNGFVNIECYKDLAGLDRVVI 285


>gi|158337450|ref|YP_001518625.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017]
 gi|158307691|gb|ABW29308.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017]
          Length = 312

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 96/184 (52%), Gaps = 10/184 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR F+   L +S D   PRPETELL+D  +  A +  R++  ++    DLGTG+GA+ L 
Sbjct: 103 WRQFH---LQVSKDVLIPRPETELLIDLVVDAAQNSARLDHLNLWA--DLGTGSGAIALG 157

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSN 171
           L    P      VD S +AL +A+ N+ T G+  +       WF  +   EG F  IVSN
Sbjct: 158 LATAFPQGTVHTVDCSREALAVAQRNSQTYGLDPQIHFHWGQWFGPLVGLEGQFSGIVSN 217

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI + I+  L  EV + +P ++LDGG DGL   + I     ++L   G   +E+   Q
Sbjct: 218 PPYIPTEILPTLQPEVFEHEPHLALDGGEDGLDAIQEIVAIAPQYLQPGGFLLLEMMCGQ 277

Query: 232 KVDV 235
              V
Sbjct: 278 DAAV 281


>gi|251780834|ref|ZP_04823754.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085149|gb|EES51039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 287

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 112/218 (51%), Gaps = 15/218 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  IL   +F N+   +      PR +TE+LV+  L      I++ D  +I DL  G+GA
Sbjct: 73  VKYILNECEFMNMNFYVEPGVLIPRADTEILVEEVLE----NIDENDSKKICDLCCGSGA 128

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTLQSDWFSSV---EG 163
           + ++L   +   K + VD+     EI +   + N     V +R + ++SD  +       
Sbjct: 129 IGISL---ANLRKNINVDL-IDYYEIPEKVTLINIKKYDVLDRTNFIKSDLLNKSINDAK 184

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +D+IVSNPPYIE   ++ L  +V++++P  +L GG DGL  Y+ I +     LN+ G+ 
Sbjct: 185 KYDIIVSNPPYIEECEINDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGIL 244

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + EIGYNQ   V  + E +    V   KD  G DRV++
Sbjct: 245 AFEIGYNQGTAVKELMEDKNFIEVKIVKDLAGLDRVVI 282


>gi|229082543|ref|ZP_04215006.1| Protein hemK [Bacillus cereus Rock4-2]
 gi|228700975|gb|EEL53498.1| Protein hemK [Bacillus cereus Rock4-2]
          Length = 283

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           LC V  ++   ++++  + + +D+++ F T  I + ++   I  ++G+  FY     ++ 
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKHVEGIPIQYMIGYEMFYGRSFFVNE 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +   PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       
Sbjct: 87  EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           VDI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L
Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +   
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGGDVKRLLQQAF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|167817594|ref|ZP_02449274.1| protein methyltransferase HemK [Burkholderia pseudomallei 91]
          Length = 224

 Score =  102 bits (254), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 116/224 (51%), Gaps = 15/224 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E I ++ G R+F+ +   ++ D   PRPETELLV++AL      I+      +LD
Sbjct: 1   RRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETELLVETALDA----IDGIASPCVLD 56

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDW 157
           LGTG+GA+ +++  E P  +   ++ S  AL++A+ NA         G   RF  L+SDW
Sbjct: 57  LGTGSGAIAVSIASERPDARVWALERSVAALDVARRNARKLLDPARAGGPLRF--LESDW 114

Query: 158 FSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +++++ GL F V+VSNPPYI          ++R F+PR +L    DGL+  RTI  G   
Sbjct: 115 YAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHA 173

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            +   G   +E GY+Q   V  + ++     V +  D    +R 
Sbjct: 174 FVAPGGALWLEHGYDQAAAVRTLLDAAGFADVESRADLASIERA 217


>gi|206970195|ref|ZP_03231148.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH1134]
 gi|206734772|gb|EDZ51941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH1134]
          Length = 283

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           LC V  ++   ++++  + + +D+++ F T  I + ++   I  ++G+  FY     ++ 
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEDQEKSF-TEFIHKYVEGIPIQYMIGYEMFYGRSFFVNE 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +   PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       
Sbjct: 87  EVLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENENLHVYT 142

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           VDI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L
Sbjct: 143 VDIAQESIEVAKENAKALGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +   
Sbjct: 201 SPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|319947034|ref|ZP_08021268.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis
           ATCC 700641]
 gi|319747082|gb|EFV99341.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis
           ATCC 700641]
          Length = 278

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 113/228 (49%), Gaps = 13/228 (5%)

Query: 38  LTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L ++I   LK H     I+G  DF     T+      PRPETE LV   L       E+ 
Sbjct: 54  LLDSIFEQLKQHIPAQYIIGSADFCGHVFTVDERVLIPRPETEELVALIL-------EEN 106

Query: 97  D--VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           D   +R+LD+GTG+GA+ ++L      ++    D+S +ALE+A+ NA  N +    D   
Sbjct: 107 DGEPLRVLDIGTGSGAIAISLALARLNWQVQASDVSEEALELAQENA--NQLEAVVDFKT 164

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD    + G +D+IVSNPPYI    ++ +G  V   +P ++L    DG + Y  IA    
Sbjct: 165 SDVLDQIAGSYDLIVSNPPYISRDDLEEVGANVLASEPHLALFADRDGYAIYEKIAQQAP 224

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261
             L  DG   +EIGY Q   V  +F E+     V   KD  G DR+++
Sbjct: 225 NVLTPDGKIYLEIGYKQGKKVKELFQEAFPNKRVRVLKDQFGQDRMVV 272


>gi|229176004|ref|ZP_04303500.1| Protein hemK [Bacillus cereus MM3]
 gi|228607497|gb|EEK64823.1| Protein hemK [Bacillus cereus MM3]
          Length = 283

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYKTSQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|301105206|ref|XP_002901687.1| methylase subunit of polypeptide release factor, putative
           [Phytophthora infestans T30-4]
 gi|262100691|gb|EEY58743.1| methylase subunit of polypeptide release factor, putative
           [Phytophthora infestans T30-4]
          Length = 261

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 117/227 (51%), Gaps = 33/227 (14%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           + + R  K E +  ++G ++F+++   ++ DT  PR ++E+L+++ +    P       +
Sbjct: 5   HCVERRSKGEPLAYVIGRKEFWSLEFKVTRDTLIPRSDSEILIETLMDQFHPETP----L 60

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTG+G + L+ L E P   GVG+DIS  AL IAK NA +N + ER + L  D   
Sbjct: 61  RILDIGTGSGCLLLSALSEFPRATGVGIDISAGALAIAKENAQSNKLEERSEFLLRD-LK 119

Query: 160 SVEGL-------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI----- 200
           ++ GL             FDVI+ NPPYI    +D +G +V  ++P I+L  GG      
Sbjct: 120 TLPGLRSDVAEDEALFRRFDVILCNPPYIPGRELDLVGPDVLKYEPHIALFSGGAATADK 179

Query: 201 -----DGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFES 241
                 GL  YR + + V    N      VEIG  +Q  +V  +F S
Sbjct: 180 CDLDPKGLRMYRLLHESVD---NLKICLLVEIGSEDQAREVKELFSS 223


>gi|229105921|ref|ZP_04236545.1| Protein hemK [Bacillus cereus Rock3-28]
 gi|228677495|gb|EEL31748.1| Protein hemK [Bacillus cereus Rock3-28]
          Length = 283

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F  +    DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSP--FYKIHQKLDVVVSNPPYITEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++++P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|150015293|ref|YP_001307547.1| HemK family modification methylase [Clostridium beijerinckii NCIMB
           8052]
 gi|149901758|gb|ABR32591.1| modification methylase, HemK family [Clostridium beijerinckii NCIMB
           8052]
          Length = 586

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 9/234 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +D +++F  + I +      +  IL   +F  +   +      PR +TE+LVD  L    
Sbjct: 355 EDAEKYF--DLIEKRRNKMPVKYILNKCEFMGIEFYVEEGVLIPRGDTEILVDEVLKI-- 410

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             IE+   ++I DL +G+GAV ++L       K   +D      +++  N   N + +R 
Sbjct: 411 --IEENQEMQICDLCSGSGAVGISLAHFRQNIKVDLIDYYPIPEKVSLINIEKNKLEDRV 468

Query: 151 DTLQSDWFS-SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             ++SD    S++   ++D+IVSNPPYIE   +  L  +V++++P  +L+GG DGL  YR
Sbjct: 469 FFIKSDLLEESIKNNKIYDIIVSNPPYIEECEIGKLMEDVKNYEPHTALNGGNDGLDFYR 528

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I D     L + G+ + EIGYNQ   V  + E+     V   KD+   DRV++
Sbjct: 529 KIIDQSQYTLRESGILAFEIGYNQGEAVKLLMENNGFTNVKIVKDFASLDRVVV 582


>gi|300871385|ref|YP_003786258.1| protein methyltransferase [Brachyspira pilosicoli 95/1000]
 gi|300689086|gb|ADK31757.1| protein methyltransferase [Brachyspira pilosicoli 95/1000]
          Length = 288

 Score =  102 bits (253), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 132/262 (50%), Gaps = 11/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S + L  V  ++  ++I D    L  ++   +   I R L +E I  I+  ++FY    
Sbjct: 27  ESQTILMHVLNINKMKLISDSLRELTQKEVNNIEELINRRLNYEPISYIINKKEFYGFNF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL----LKESPF 121
            + ++   PRPETE L+D  L +    ++ ++ + I D+G G+G + + L    L+++  
Sbjct: 87  YVDNNVLIPRPETEELIDLVLDY----MKDKNNISICDIGGGSGNIAITLKKLFLEQNKN 142

Query: 122 FKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                ++IS  A ++ K NA+   G  +  + + +D  + + E  +DVIVSN PY+    
Sbjct: 143 IDITAIEISEGAFQVIKKNALNILGDEKLINIVNTDALTFIPENKYDVIVSNAPYVPLRD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  ++ +F+P+ +L  G DGL  Y+     + ++L  +G+   EI Y+Q   ++ I 
Sbjct: 203 KDSLQKDL-EFEPQNALYSGYDGLDFYKAFLSIIKKYLKDNGVFFFEISYDQGEALINIC 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            S  +  V   KD  G DR L+
Sbjct: 262 NSLNIKNVLVKKDLNGKDRFLV 283


>gi|225867309|ref|YP_002752687.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus 03BB102]
 gi|225789080|gb|ACO29297.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus 03BB102]
          Length = 283

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T +I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTESIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|312131682|ref|YP_003999022.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific
           [Leadbetterella byssophila DSM 17132]
 gi|311908228|gb|ADQ18669.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leadbetterella byssophila DSM 17132]
          Length = 275

 Score =  102 bits (253), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 11/222 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R  + E I  ILG   F N R  ++     PRPETE LV    A S P+       ++
Sbjct: 58  IERINQGEPIQYILGEAWFMNRRFHVNPSVLIPRPETEELVTHVSALS-PK-------KV 109

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160
           LDLGTG+G + + +  E+P  +  G+DIS  ALE AK NA  +  + +F       F + 
Sbjct: 110 LDLGTGSGCIPVNIALENPEAEVFGIDISEHALETAKRNAEEHKANVKFALANMLDFQNP 169

Query: 161 -VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218
            +   FD+I+SNPPY++      +   V DF+P ++L    +D L  YR IAD   +HL 
Sbjct: 170 FLVQEFDLIISNPPYVKENEKPEMRKNVLDFEPHLALFVSDLDPLIFYRAIADIAWKHLA 229

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             G   +EI      +   +F  +    V   KD+ G +R L
Sbjct: 230 PRGALWLEINSYLGKETAELFSQKGYKHVRLLKDFFGKERFL 271


>gi|227499755|ref|ZP_03929855.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus tetradius ATCC 35098]
 gi|227218141|gb|EEI83407.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus tetradius ATCC 35098]
          Length = 272

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 8/251 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   +   +I+     L++  R  L   I +  K   +   +G  +F+ +   +   
Sbjct: 26  LTYLLNTNKSSIILRSGEELNNEIRVKLEEIIDKCEKGYPLQYAIGQWEFFGLNFKVDER 85

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD  +        K+D  +ILD+GTG+GA+ L+L K       +  DI 
Sbjct: 86  ALIPRFETEIIVDYLIKAPF----KKD--KILDIGTGSGAIALSLAKNLKASDILASDIE 139

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +AL +A+ N     +S     ++SD F  + G FD+I+SNPPYI S   + L   +  +
Sbjct: 140 DRALSLAEENKKRLKIS-NVSFIKSDLFEEISGKFDIIISNPPYINSKDFEKLDKTLY-Y 197

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L    +GL  Y+ I    S +LN+      EIGY+QK D+  +        +   
Sbjct: 198 EPKSALLAEENGLYFYKRIIKDASSYLNEGARLVFEIGYDQKSDISSLLNESDFKNIICI 257

Query: 251 KDYGGNDRVLL 261
           KDY   DR ++
Sbjct: 258 KDYNDFDRFII 268


>gi|167620579|ref|ZP_02389210.1| hemK protein [Burkholderia thailandensis Bt4]
          Length = 246

 Score =  101 bits (252), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 17/234 (7%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           +R+    A  R    E + ++ G R+F+ +   ++ D   PRPETELLV++AL      I
Sbjct: 15  ERYLALEA--RRAAGEPVAQLTGAREFFGLDFDVTPDVLIPRPETELLVETALDA----I 68

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------VTNGVS 147
           +      +LDLG G+GA+ +++    P  +   +D S  AL++A+ NA         G  
Sbjct: 69  DGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNARKLLDPARAGGP 128

Query: 148 ERFDTLQSDWFSSVE-GL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            RF  L+SDW+++++ GL F V+VSNPPYI          ++R F+PR +L    DGL+ 
Sbjct: 129 LRF--LESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGALTDEDDGLAA 185

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            RTI  G    +   G   +E GY+Q   V  + E+     V +  D    +R 
Sbjct: 186 IRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALLEAAGFADVESLADLASIERA 239


>gi|169826580|ref|YP_001696738.1| HemK-like protein [Lysinibacillus sphaericus C3-41]
 gi|168991068|gb|ACA38608.1| HemK-like protein [Lysinibacillus sphaericus C3-41]
          Length = 285

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 20/280 (7%)

Query: 1   MQALRDSHSFLC--------------RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL 46
           M+AL  + SFL                + G S  +V++     L + Q+      I   +
Sbjct: 7   MEALEWASSFLVDNGREQTAARIVMQHILGTSYSEVMLHLQDKLTEAQQVKFKALIEEHV 66

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
               +   +G  +FY     +      PRPETE L+   +   + ++ +   +++ D+GT
Sbjct: 67  NGRPVQYCVGSEEFYGRSFIVDESVLIPRPETEELILGTIN-RMTKLFQHQALKVADIGT 125

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165
           G+GA+ +++  E P    V  D+S  AL  A+ NA    +    D    D  + + G  F
Sbjct: 126 GSGAIAISMKLECPTLTVVATDLSEAALATAQKNA--QRLEANIDFRLGDLTAPLAGEKF 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+++SNPPYI       +   V   +P  +L    DGL  YR +A+ +  ++N+  L  +
Sbjct: 184 DIVLSNPPYIAFEEAQAMSDVVLKHEPHSALFAEEDGLILYRQLAEQLPAYMNRPALIGL 243

Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264
           EIGY Q   V + F+ S     ++  KD  G  R ++FC 
Sbjct: 244 EIGYTQGEKVAKFFQDSFPQATISIEKDINGKPR-MIFCE 282


>gi|118480363|ref|YP_897514.1| HemK family modification methylase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118419588|gb|ABK88007.1| modification methylase, HemK family [Bacillus thuringiensis str. Al
           Hakam]
          Length = 283

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKMNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|121997790|ref|YP_001002577.1| HemK family modification methylase [Halorhodospira halophila SL1]
 gi|121589195|gb|ABM61775.1| [protein release factor]-glutamine N5-methyltransferase
           [Halorhodospira halophila SL1]
          Length = 281

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G+    +   P+  +           I R    E +  ++   +F ++ L
Sbjct: 29  DAELLLAEVLGVGRSHLFAFPERPIPAATIEAYRALIARRRTGEPVAYLMRRCEFRDLTL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +++     PRPETE LV+ A+A  LP   +     +L+LGTG+GA+ LA+  E P  +  
Sbjct: 89  SVTPAVLVPRPETEHLVEQAVA-CLPAGGQ-----VLELGTGSGAIALAVAHERPDARIT 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
             + S  AL +A+ N    G+SE   T   DW   +  G FDVIVSNPPY+++   +  G
Sbjct: 143 ATERSTAALAVAQENRHRLGLSEVHLT-PGDWNEGIPPGPFDVIVSNPPYVQTTAAE-WG 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               + +PR +L  G DGL+  R++    +  L + G   +E G  Q   V  + ++  L
Sbjct: 201 NGALEHEPREALAAGHDGLADIRSLVPPATAELARGGWLILEHGARQGGAVRELLQAAGL 260

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V    D  G +R+ L  R
Sbjct: 261 EAVRTECDLAGLERLTLGRR 280


>gi|254447043|ref|ZP_05060510.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium HTCC5015]
 gi|198263182|gb|EDY87460.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium HTCC5015]
          Length = 285

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEP 74
           G S  + I D D VL + Q+    + + R +   +    + G   F  +   ++ DT  P
Sbjct: 41  GRSPAEPIEDADIVLSEDQQQAAFDWLQRRIDTRKPTAYLTGQAWFCGLPFEVTEDTLIP 100

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R     L+    +  LPR  +R    +LDL TG G + +A     P  + VG DIS  AL
Sbjct: 101 RSPIAELIQQQFSPWLPRPPQR----VLDLCTGGGCIAIACAYAFPDAQVVGTDISEAAL 156

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            +A+ N   + +  R   L SD FS+VEG FD+IVSNPPY+++  +  L  E R  +P +
Sbjct: 157 AVARRNVAAHQLQGRVQCLSSDVFSNVEGCFDLIVSNPPYVDAEDMAALPAEYR-HEPEL 215

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +L    DGL   R I   V  +L+ DG+  +E+G N +  +V  +
Sbjct: 216 ALASERDGLGITRRILADVGNYLSDDGVLVLEVG-NSETALVEAY 259


>gi|113953082|ref|YP_729766.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311]
 gi|113880433|gb|ABI45391.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311]
          Length = 306

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 109/215 (50%), Gaps = 9/215 (4%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVC 112
           I  WRD     L +SSD   PR ETELL++ AL   LP  + RDV  I  DLGTG+GA+ 
Sbjct: 83  ICPWRDL---ELEVSSDALIPRQETELLIELALQ-CLPE-DARDVEGIWADLGTGSGALA 137

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
            AL +  P ++G  VD S  AL +A+ N +       +      W+  ++   G  D+++
Sbjct: 138 AALARVFPSWQGHAVDSSGSALALAERNLIALAGKSDWQLHLGSWWEPLKPWWGQIDLVL 197

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI + ++D L   V+D +P ++L GG DGL   R I    SR L   G   +E  +
Sbjct: 198 SNPPYIPTAVMDELAPVVKDHEPHLALCGGEDGLDCCRQIIRDASRALAPGGWILLEHHH 257

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +Q   V+++     L    A  D  G  R  L  R
Sbjct: 258 DQSAMVLKLLSDAGLERPEARYDLQGIPRFALAQR 292


>gi|218264487|ref|ZP_03478320.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221980|gb|EEC94630.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii
           DSM 18315]
          Length = 291

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 18/257 (7%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           RV  +  H  +   D  L + ++  + + + R  + E I  ILG  DFY+++  +     
Sbjct: 40  RVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEVDPSVL 99

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV+  +   L   +K+  ++ILD+GTG+G + + L K       +  DIS +
Sbjct: 100 IPRPETEELVEQVI---LDNADKK--IKILDIGTGSGCIAVTLRKHLKKASVIATDISAE 154

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLE 186
           AL  A+ NA  N  +  F  +Q+D     +       + DVIVSNPPYI+      +   
Sbjct: 155 ALVTARRNAKRNNTTVTF--IQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKKDMERN 212

Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           V D++P ++L   D   D L +Y  IA    + L ++G    EI       VV + E   
Sbjct: 213 VLDYEPHLALFVPDN--DPLLYYWHIAHFGKKKLRRNGRLYFEINAACSNMVVEMLEEEG 270

Query: 244 LFLVNAFKDYGGNDRVL 260
              +   +D  G DR++
Sbjct: 271 YKNIELIQDLSGRDRII 287


>gi|256820610|ref|YP_003141889.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
           7271]
 gi|256582193|gb|ACU93328.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
           7271]
          Length = 281

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 125/248 (50%), Gaps = 12/248 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S   ++ + D++L +     +  AI      + I  ILG  +F++ R  ++ +   PRPE
Sbjct: 38  SKATILANSDTLLTEDIAQPILQAIRELQTAKPIQYILGETEFFSNRFFVNENVLIPRPE 97

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LVD  L    P  +K + ++ILD+GTG+G + ++L K  P      +D+S +AL++A
Sbjct: 98  TEELVDWVLQ-EYP--DKSEKIKILDVGTGSGCIAISLAKALPNAVVTAIDVSEEALKVA 154

Query: 138 KSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           K NA  N V   F  LQ D     ++   +D+I+SNPPY+  +    +   V +++P ++
Sbjct: 155 KRNAELNSVVTHF--LQQDILRIETLSDKYDIIISNPPYVRELEKKEIHHNVLEYEPHLA 212

Query: 196 L---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L   D   + L  Y  IA    + LN +G    EI      ++  + E +    +   +D
Sbjct: 213 LFVPDN--NPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMQTLLEQKHFTEITLRQD 270

Query: 253 YGGNDRVL 260
             GNDR++
Sbjct: 271 LFGNDRMI 278


>gi|212640539|ref|YP_002317059.1| methylase of polypeptide chain release factor [Anoxybacillus
           flavithermus WK1]
 gi|212562019|gb|ACJ35074.1| Methylase of polypeptide chain release factor [Anoxybacillus
           flavithermus WK1]
          Length = 283

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 11/208 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D + +  ++ F+ +    +L+H  I  I+G   FY     ++     PRPETE LV   L
Sbjct: 47  DPMDEASEQTFMADVKKHALQHVPIQYIIGHEQFYGRTFIVNEHVLIPRPETEELVSHVL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +  +      + ++D+GTG+GA+ + L  E P +   G+DI+  +LE+AK NA   G 
Sbjct: 107 ARTTEK-----ALSVVDVGTGSGAIAITLSLERPTWHVYGIDIAVSSLEVAKRNANQLGA 161

Query: 147 SERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              +   D LQ      ++   DV+VSNPPYI +  +  L   V+  +P  +L GG DGL
Sbjct: 162 CVHWFEGDLLQPIIDRGIQ--VDVVVSNPPYIPASDIPTLSPVVQK-EPLRALVGGEDGL 218

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             YR + + +   +    L + EIG+ Q
Sbjct: 219 LFYRRLMEQLPHVVTSQALIAFEIGHGQ 246


>gi|116491554|ref|YP_811098.1| methylase of polypeptide chain release factor [Oenococcus oeni
           PSU-1]
 gi|290891159|ref|ZP_06554221.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429]
 gi|116092279|gb|ABJ57433.1| Methylase of polypeptide chain release factor [Oenococcus oeni
           PSU-1]
 gi|290479123|gb|EFD87785.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429]
          Length = 275

 Score =  101 bits (252), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG+ +FY    ++      P  ET  L+D      L  +E  D   ILD+GTG+
Sbjct: 63  EPVQYVLGFANFYGRDFSVGPQVLIPEVETAELIDHVKNAVLLPLE--DDFSILDIGTGS 120

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDV 167
           G + + L  E      + VDIS  AL++AK N+     +E +F  ++SD   +V GLFD+
Sbjct: 121 GNLAITLALELKAKNVLAVDISQDALDLAKKNSQNLSATEVKF--IRSDLLENVNGLFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPY+++   + +  +V DF+P  +L  G DG+  +R +     +HL  DG    E+
Sbjct: 179 IVSNPPYVKTGEKE-IDKQVVDFEPHQALYAGADGMDVFRKMIPETVKHLKPDGYAIFEM 237

Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
            Y Q  ++  +   +K F    +  FKD  G DR +
Sbjct: 238 DYRQGDEIKSLI--KKNFPKAQIEIFKDISGLDRFI 271


>gi|194477095|ref|YP_002049274.1| modification methylase, HemK family protein [Paulinella
           chromatophora]
 gi|171192102|gb|ACB43064.1| modification methylase, HemK family protein [Paulinella
           chromatophora]
          Length = 317

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 105/214 (49%), Gaps = 12/214 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIE-----KRDVVRILDLGTG 107
           I  WRD Y   L   S    PR ETELLVD AL   S  R +     +    R  DLGTG
Sbjct: 100 ICPWRDLY---LKSDSGVLIPRQETELLVDLALHCVSHSRHKLFVGGELPTYRWADLGTG 156

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GL 164
           +GA+ +AL +  P + G   D + +A   ++ N      +++    Q DWF  +    G 
Sbjct: 157 SGAIAVALSRALPSWLGHATDYTNEAFYQSERNIKQLAFNKKVVLTQGDWFLPLHPWWGQ 216

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F++I++NPPYI S +V+ L   + + +PR+SLDGG DGL   R +     R L   G   
Sbjct: 217 FNLILANPPYIPSKVVNSLETNILNNEPRLSLDGGHDGLKSIRILVKEAPRILITGGWIL 276

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +E  ++Q   ++++     L  V   +D  G  R
Sbjct: 277 IEHHHDQNACIMQLMIKAGLSNVQWARDLDGKLR 310


>gi|33519809|ref|NP_878641.1| putative protoporphyrinogen oxidase [Candidatus Blochmannia
           floridanus]
 gi|33504154|emb|CAD83416.1| methylase of polypeptide chain release factors [Candidatus
           Blochmannia floridanus]
          Length = 281

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 13/259 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RDS   L  VT  S  Q++   ++ L   Q   L + I R  K E I  ++G ++F+++ 
Sbjct: 23  RDSEIILEIVTKKSREQLLTFEETTLTPEQIKKLQSLIDRRKKSEPIAYLVGSKEFWSLS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S   F PR +TE L++  L      I   + +++LDLG+G G++ LAL  E P +  
Sbjct: 83  FKISPGVFIPRTDTECLIEEVLNL----IPDCNHLKVLDLGSGVGSIALALASERPTWNI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            G+D   +A+ +    A+ N  S +F  +   QS+WF+ + +  F +IVSNPPYI    +
Sbjct: 139 TGIDQQQQAVIL----AIKNQKSYKFRNVEFKQSNWFTKIKKNKFHLIVSNPPYINEHDL 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  ++  F+P+ +L     GL     I      HL   G   +E G+NQ   +  +  
Sbjct: 195 HFLSQDIH-FEPKSALVSPYYGLKDLIIICKQSINHLYPMGWLCLEHGWNQGKYIRTLLH 253

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +     ++   DY   +R+
Sbjct: 254 AIGFNNIHTILDYHQYERI 272


>gi|229099761|ref|ZP_04230686.1| Protein hemK [Bacillus cereus Rock3-29]
 gi|228683650|gb|EEL37603.1| Protein hemK [Bacillus cereus Rock3-29]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G    F   D L    F  ++   DV+VSNPPYI       L 
Sbjct: 144 DIARESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQVFP 261

Query: 245 FL-VNAFKDYGGNDRVLL 261
           +  V    D  G DR++ 
Sbjct: 262 YAHVEVVFDINGKDRMVF 279


>gi|218906506|ref|YP_002454340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH820]
 gi|229124832|ref|ZP_04254010.1| Protein hemK [Bacillus cereus 95/8201]
 gi|218534962|gb|ACK87360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH820]
 gi|228658623|gb|EEL14285.1| Protein hemK [Bacillus cereus 95/8201]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + +K   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLYVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|207721784|ref|YP_002252222.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum MolK2]
 gi|206586948|emb|CAQ17532.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum MolK2]
          Length = 245

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 109/223 (48%), Gaps = 15/223 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFGRLF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++     PRP+TELLV+ AL     RIE RD   +LDLGTG+G  AV +AL +     +
Sbjct: 91  QVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTVALARRD--AR 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPYIESV 178
               D S  AL +A  NA T G +     L  DW+     S     FD+IVSNPPYI S 
Sbjct: 145 VWATDASADALAVAAGNAQTLGAANVHVAL-GDWYGALPESDAPPAFDLIVSNPPYIASA 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                  ++R F+P  +L    DGL H RTI  G    L  DG
Sbjct: 204 DAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADG 245


>gi|218235275|ref|YP_002370105.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus B4264]
 gi|218163232|gb|ACK63224.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus B4264]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAVVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV ++ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKKLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|229020547|ref|ZP_04177292.1| Protein hemK [Bacillus cereus AH1273]
 gi|229026768|ref|ZP_04183100.1| Protein hemK [Bacillus cereus AH1272]
 gi|228734491|gb|EEL85153.1| Protein hemK [Bacillus cereus AH1272]
 gi|228740767|gb|EEL91020.1| Protein hemK [Bacillus cereus AH1273]
          Length = 283

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 123/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQETSFTEFIHKHVEGIPIQYMMGYEIFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA   G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKALGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLKKKAIVAFEIGVGQGEDVKALLQQTFPH 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AHVEVVFDINGKDRMVF 279


>gi|225621001|ref|YP_002722259.1| modification methylase, HemK family [Brachyspira hyodysenteriae
           WA1]
 gi|225215821|gb|ACN84555.1| modification methylase, HemK family [Brachyspira hyodysenteriae
           WA1]
          Length = 290

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 16/241 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           DS ++  +RF     I R + +E +  I+  ++FY +   + ++   PRPETE L+D  L
Sbjct: 53  DSDINKIERF-----INRRINYEPLSYIINKKEFYGLDFYVDNNVLIPRPETEELIDLVL 107

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLAL----LKESPFFKGVGVDISCKALEIAKSNAV 142
            ++       D + I D+G+G+G + + L    L ++       ++IS  A E+ K NA+
Sbjct: 108 DYT----NDEDNIFICDIGSGSGNIPITLKRLFLDQNKNIDITAIEISNGAFEVIKKNAL 163

Query: 143 TN-GVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              G  +  + + +D  + + E  FD+IVSN PY+     D L  ++ +F+P+ +L  G 
Sbjct: 164 NILGDEKIINIINADALTFTPENKFDIIVSNAPYVPLRDKDLLQKDL-EFEPQNALYSGY 222

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL  Y++    + ++L  DG    EIGY+Q   ++ I  S  +  V+  KD  G DR L
Sbjct: 223 DGLDFYKSFLSIIEKYLKDDGAFFFEIGYDQGEALINICNSLDIKNVSVKKDLSGKDRFL 282

Query: 261 L 261
           +
Sbjct: 283 V 283


>gi|116873907|ref|YP_850688.1| HemK family modification methylase [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116742785|emb|CAK21909.1| modification methylase, HemK family [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 283

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  IL    FY     ++ D   PRPETE LV  A  F    ++K  V+ +LD
Sbjct: 62  RYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVACAETF----LKKHPVMNVLD 117

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           + TG+G + +AL K  P       DIS  AL +AK NA+      RF   D L++  F  
Sbjct: 118 VCTGSGIIAIALKKAFPNITFTASDISGPALAVAKKNALLLNADIRFVETDLLET--FKH 175

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FD+I++NPPYI       +   V   +P ++L    DG++ Y    D +   LN  
Sbjct: 176 NGERFDMIIANPPYISEAEKAAMSDYVLKNEPSLALFAENDGMAIYERFVDNLKYVLNTS 235

Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258
               VEIGY Q   V ++FE S     V   KD    DR
Sbjct: 236 FWVGVEIGYTQGERVKQLFEKSYPHSTVLIHKDINSKDR 274


>gi|331270452|ref|YP_004396944.1| methyltransferase [Clostridium botulinum BKT015925]
 gi|329127002|gb|AEB76947.1| Methyltransferase [Clostridium botulinum BKT015925]
          Length = 282

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 7/214 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  +F  +   +      PR +TE+LV+  +      I +     I D+  G+GA
Sbjct: 70  VKYILGECEFMGLNFNVKKGVLIPRADTEILVEEVIK----EIRENGYNNICDVCCGSGA 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDV 167
           + +++ K     +    DIS  A+E+ KSN     ++++    +SD     +    ++DV
Sbjct: 126 IGISIAKYINKTRVDCYDISDIAIEVTKSNINKLELNDKVYVYKSDLLDEAKKQNKMYDV 185

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI+  ++  L  +V++++P I+L GG DGL  Y  I       LN+ GL + EI
Sbjct: 186 IVSNPPYIKEDVIPTLMKDVKEYEPYIALCGGKDGLYFYNKITKDSVVFLNRGGLLAFEI 245

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY+Q  DV  I        +   KD  G DRV++
Sbjct: 246 GYDQGKDVEEILIQNGFSNIRVIKDLAGLDRVVV 279


>gi|52140234|ref|YP_086597.1| HemK family modification methylase [Bacillus cereus E33L]
 gi|51973703|gb|AAU15253.1| modification methylase, HemK family [Bacillus cereus E33L]
          Length = 283

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 15/259 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + + + L K  + + EIG  Q  DV  +   +K F
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPKVLQKKAIVAFEIGVGQGEDVKGLL--QKAF 260

Query: 246 ---LVNAFKDYGGNDRVLL 261
               V    D  G DR++ 
Sbjct: 261 PHAHVEVVFDINGKDRMVF 279


>gi|120434996|ref|YP_860682.1| modification methylase HemK [Gramella forsetii KT0803]
 gi|117577146|emb|CAL65615.1| modification methylase HemK [Gramella forsetii KT0803]
          Length = 282

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 107/217 (49%), Gaps = 10/217 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G+    + ++P   +   ++    +A+ R  KHE I  I G  +F+  +  ++     PR
Sbjct: 36  GMQKVDIALNPTQEISKEEQTKFESALNRLKKHEPIQYITGNTEFFTRKFLVNKSVLIPR 95

Query: 76  PETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PETE LV+  ++      + R     ++ILD+GTG+G + ++L KE    K    DIS +
Sbjct: 96  PETEELVEWIIS------DHRSTGQELKILDIGTGSGCIPISLAKELEDAKVSSFDISSE 149

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           AL IAK NA  N     F  L       +EG FD+IVSNPPY+  +    +   V D +P
Sbjct: 150 ALLIAKRNAKLNAADVLFRKLNILEAEELEGQFDIIVSNPPYVRELEKKEMHQNVLDHEP 209

Query: 193 RISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +++L     + L  Y+ IA+   + LN  G    EI 
Sbjct: 210 KLALYVEDENALIFYKKIAELAVKSLNPAGCLYFEIN 246


>gi|118586289|ref|ZP_01543744.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163]
 gi|118433284|gb|EAV39995.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163]
          Length = 275

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG+ +FY    ++      P  ET  L+D      L  +E  D   ILD+GTG+
Sbjct: 63  EPVQYVLGFANFYGRDFSVGPQVLIPEVETAELIDHVKNAVLLPLE--DDFSILDIGTGS 120

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDV 167
           G + + L  E      + VDIS  AL++AK N+     +E +F  ++SD   +V G+FD+
Sbjct: 121 GNLAITLALELKAKNVLAVDISQDALDLAKKNSQNLSATEVKF--IRSDLLENVNGMFDL 178

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPY+++   + +  +V DF+P  +L  G DG+  +R +     +HL  DG    E+
Sbjct: 179 IVSNPPYVKTGEKE-IDKQVVDFEPHQALYAGADGMDVFRKMIPETVKHLKPDGYAIFEM 237

Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
            Y Q  ++  +   +K F    +  FKD  G DR +
Sbjct: 238 DYRQGDEIKSLI--KKNFPKAQIEIFKDISGLDRFI 271


>gi|163943016|ref|YP_001647900.1| HemK family modification methylase [Bacillus weihenstephanensis
           KBAB4]
 gi|163865213|gb|ABY46272.1| modification methylase, HemK family [Bacillus weihenstephanensis
           KBAB4]
          Length = 283

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I   ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHNHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + I D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFPR 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AQVEVVFDINGKDRMVF 279


>gi|91201017|emb|CAJ74074.1| similar to protein methyltransferase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 323

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 13/233 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R  K   +  I    +F +    +      PRPETELLV++ +  +   I + ++V 
Sbjct: 86  AVQRRAKRVPLQYITNHAEFMSSDFYVDERVLIPRPETELLVEAVIKKAKSFIHENEIV- 144

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--------FDT 152
           I+D+G G+G + ++L K       + +DIS +AL++AK N   + + E+        ++ 
Sbjct: 145 IIDIGVGSGNIAISLAKNISTAGIMAIDISPEALDVAKMNTQKHHLQEKITFLCGNVYEP 204

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           LQS    S++     IVSNPPYI S  +  L  EVRD++P  +L  G  GL  +  I   
Sbjct: 205 LQS---CSIKTKAHFIVSNPPYIASTELSELQQEVRDYEPYTALISGNSGLEMFERILAE 261

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            +  L   G   +E+   Q   V+++ ++  +F  +   KDY    R+++  R
Sbjct: 262 ANSWLRPAGFLLLEVAEKQARQVIKMIKNTNIFTSIQRIKDYQNISRIIIAQR 314


>gi|298386834|ref|ZP_06996389.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 1_1_14]
 gi|298260508|gb|EFI03377.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 1_1_14]
          Length = 278

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 12/262 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S    C + G+ +  + +  D +L   ++  L N I R  K+E I  I G+ +F      
Sbjct: 25  SMLICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFR 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +       E  D  R+LD+GTG+G + ++L K+ P  K   
Sbjct: 85  VAPGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKKLPDAKVDA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCL 183
            DIS +AL IA+ N     +  +    + D FS+  ++G  +D+IVSNPPY+       +
Sbjct: 139 WDISEEALAIARKN--NEELDAQVTFCRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEM 196

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V D++P ++L     D L  YR IA+     L   G    EI      D++R+ E  
Sbjct: 197 EANVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMN 256

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
           +   V   KD  G DR+L   R
Sbjct: 257 QYRDVRVIKDIFGKDRILTANR 278


>gi|86607398|ref|YP_476161.1| HemK family methyltransferase [Synechococcus sp. JA-3-3Ab]
 gi|86555940|gb|ABD00898.1| methyltransferase, HemK family [Synechococcus sp. JA-3-3Ab]
          Length = 285

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 12/240 (5%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           DP + +++  R  LT  I        +  +LG  ++  + L ++     PRPETELLV+ 
Sbjct: 48  DPLAEVEELWRRRLTERI-------PLQYLLGRVEWAGLSLRVTPAVLIPRPETELLVEQ 100

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A +  L            DLGTG+GA+ +AL +  P  + + VD+S +AL +A +N    
Sbjct: 101 A-SLWLQSNLLPPGSPFADLGTGSGAIAIALAQGHPQLQLLAVDVSPEALAVAAANVADY 159

Query: 145 GVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            + ER   LQ  WF+ ++   G    +VSNPPYI +  +  L  EVR  +PR +LDGG D
Sbjct: 160 HLQERVKLLQGSWFAPLDPWRGRLRGLVSNPPYIPTGELAYLMPEVRLHEPRQALDGGED 219

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
           GL H R +      +L  +   +VE+   Q   V    ++R  +  +   +D  G +RV+
Sbjct: 220 GLVHLRLLIQKAPDYLAPNSFWAVEVMQGQAPWVAEQLQARGGYQQIQVHRDLAGIERVV 279


>gi|229164276|ref|ZP_04292209.1| Protein hemK [Bacillus cereus R309803]
 gi|228619216|gb|EEK76109.1| Protein hemK [Bacillus cereus R309803]
          Length = 283

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITVEQEKSFTEFIHKHVEGIPIQYMMGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     R+E+      + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RVERHFGDKELHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G   +F    L S ++ + + L D++VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVKFYHGDLLSPFYETGQKL-DIVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|332519660|ref|ZP_08396124.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lacinutrix algicola 5H-3-7-4]
 gi|332044219|gb|EGI80413.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lacinutrix algicola 5H-3-7-4]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 21/268 (7%)

Query: 7   SHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES-IHRILGWRDFYNV 63
           S  F+C      ++  Q+ +D D  ++  ++  + NA+   LK+E  I  I+G  +FY +
Sbjct: 27  SFFFICTENYYNVTRLQLALDSDLAINKEEQTVIFNAL-EDLKNEKPIQYIIGETEFYGL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++  T  PRPETE LV   L  +  ++++   +  LD+GTG+G + ++L KE    +
Sbjct: 86  PFKVNKHTLIPRPETEELVTLVLKTAKQKLKESKPLTCLDIGTGSGCIAISLAKELKEAQ 145

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF----------DTLQSDWFSSVEGLFDVIVSNPP 173
              +D+S +A++ AK NAV N V+  F          +TL  D        F+VIVSNPP
Sbjct: 146 VYAIDVSTEAIKKAKENAVLNNVAVEFIKCDILNACNETLNKDL------KFNVIVSNPP 199

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           Y+ ++    +   V + +P ++L    D  L  Y+ IA+  ++ L+K+G    EI     
Sbjct: 200 YVRNLEKAEIKNNVLNNEPHLALFVEDDNPLLFYKAIAEFATKKLHKNGKLFFEINEYLG 259

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +   + E+     V   KD    DR+L
Sbjct: 260 EETKALVENIGFKNVEIIKDIFNKDRML 287


>gi|154491829|ref|ZP_02031455.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC
           43184]
 gi|154088070|gb|EDN87115.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC
           43184]
          Length = 291

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 18/257 (7%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           RV  +  H  +   D  L + ++  + + + R  + E I  ILG  DFY+++  +     
Sbjct: 40  RVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEVDPSVL 99

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV+  +   L   +++  ++ILD+GTG+G + + L K       +  DIS +
Sbjct: 100 IPRPETEELVEQVI---LDNADQK--IKILDIGTGSGCIAVTLRKHLKKASVIATDISAE 154

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLE 186
           AL  A+ NA  N  +  F  +Q+D     +       + DVIVSNPPYI+      +   
Sbjct: 155 ALATARRNAKRNNTTVTF--IQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKKDMERN 212

Query: 187 VRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           V D++P ++L   D   D L +Y  IA    + L ++G    EI       VV + E   
Sbjct: 213 VLDYEPHLALFVPDN--DPLLYYWHIAHFGKKKLRRNGHLYFEINAACGNMVVEMLEEEG 270

Query: 244 LFLVNAFKDYGGNDRVL 260
              +   +D  G DR++
Sbjct: 271 YKNIELIQDLSGKDRII 287


>gi|78485887|ref|YP_391812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thiomicrospira crunogena XCL-2]
 gi|78364173|gb|ABB42138.1| modification methylase, HemK family [Thiomicrospira crunogena
           XCL-2]
          Length = 310

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 7/174 (4%)

Query: 60  FYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  ++  +S  T  PR P  EL+         P +E   V RILDL TG+G + LA L+ 
Sbjct: 97  FAGLKFKVSEATLVPRSPIAELIAQE----YRPWVEPESVHRILDLCTGSGCIGLASLQA 152

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
            P      VDIS +ALE+A+ N     + +    +QSD FS++ G  +D+IVSNPPY+++
Sbjct: 153 CPNATVDLVDISPEALEVAQRNIEMYHLDDVATAIQSDLFSALSGRKYDLIVSNPPYVDA 212

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           + +D L  E    +PR+ L+ G DGL   R I    S +LN++G   VE+G +Q
Sbjct: 213 IEMDALPEEFHQ-EPRLGLEAGPDGLDLVRRILAEASAYLNEEGTLIVEVGVSQ 265


>gi|229033961|ref|ZP_04188915.1| Protein hemK [Bacillus cereus AH1271]
 gi|228728387|gb|EEL79409.1| Protein hemK [Bacillus cereus AH1271]
          Length = 283

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G    F   D L    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSP--FHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|282897449|ref|ZP_06305451.1| Modification methylase HemK [Raphidiopsis brookii D9]
 gi|281198101|gb|EFA72995.1| Modification methylase HemK [Raphidiopsis brookii D9]
          Length = 298

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 9/178 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR+F    L +S     PRPETE+L+D  +  +   ++    V   DLGTG+GA+ L L+
Sbjct: 91  WRNF---TLAVSDAVLIPRPETEILIDLVIESANQDLQSGIWV---DLGTGSGAIALGLV 144

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173
           +     K  G DIS +AL +A++NA   G ++R +  Q  W+   + ++G    +VSNPP
Sbjct: 145 EVLTNAKIYGTDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLKGKISGMVSNPP 204

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI S ++  L  EV   +P ++LDGG+DGL   R + +    +L   G+  +E+   Q
Sbjct: 205 YIPSDLIGTLEPEVVKHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQ 262


>gi|324329277|gb|ADY24537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 283

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKIHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|300117842|ref|ZP_07055609.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus SJ1]
 gi|298724706|gb|EFI65381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus SJ1]
          Length = 283

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFDDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|224025263|ref|ZP_03643629.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM
           18228]
 gi|224018499|gb|EEF76497.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM
           18228]
          Length = 279

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 14/240 (5%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           D D   D+R R  L N + R   +E +  I+G   F  +   ++     PRPETE LV S
Sbjct: 45  DTDFPTDERAR--LNNILTRLKSYEPLQYIIGETRFSGLPFEVTPSVLIPRPETEELV-S 101

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            +    P +     VRILD+GTG+G + ++L    P       D+S +ALE+A+ NA+ N
Sbjct: 102 WIVEDHPDVP----VRILDIGTGSGCIPVSLAHRLPLSTVHAWDVSPEALEVARRNAIRN 157

Query: 145 GVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI 200
           GV+  F   D LQ  W S      DV+VSNPPYI       +   V D++P ++L     
Sbjct: 158 GVTVHFQQVDALQESWPSLN---IDVLVSNPPYITEKERTDMERNVLDWEPELALFVPDN 214

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D L  YR IA      L+  G    EI      + V + +      V   KD  GNDR++
Sbjct: 215 DPLLFYRHIARIGLDLLSPSGTLYYEINRAYGAETVSLLQQLGYHSVELRKDLSGNDRMV 274


>gi|319936942|ref|ZP_08011352.1| modification methylase [Coprobacillus sp. 29_1]
 gi|319807878|gb|EFW04457.1| modification methylase [Coprobacillus sp. 29_1]
          Length = 284

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 14/251 (5%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
             HQ+ +  D  ++D         I R +  E I  I G   F++    ++ D   PR E
Sbjct: 35  EPHQLYLMMDEEVEDELYQAFQAGIKRYMDGEPIQYIKGKETFFSRDFIVNEDVLIPRYE 94

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV++ L       E  + + + D+GTG+GA+ ++L  E      V  DIS +ALE+A
Sbjct: 95  TEELVENILYKIDDYFEDYESIDLCDVGTGSGAIAISLALEESKLNVVATDISKEALEVA 154

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           + NA   G +  F   Q D    +   E   D+ VSNPPYI  V  D   + V+D +P +
Sbjct: 155 RLNAQELGANIEF--YQGDMLEPLIDREMKVDIFVSNPPYI-PVEQDIESV-VKDNEPHV 210

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN----AF 250
           +L GG DGL  YR I   V   +    L + E+G++Q+  + +  E    +  N      
Sbjct: 211 ALFGGNDGLYFYRKIFSKVQSVIKDRALLAFEMGFDQRELMCQAVEH---YFPNIPYEII 267

Query: 251 KDYGGNDRVLL 261
           KD  G DR+L 
Sbjct: 268 KDINGKDRMLF 278


>gi|332705342|ref|ZP_08425420.1| HemK family putative methylase [Lyngbya majuscula 3L]
 gi|332355702|gb|EGJ35164.1| HemK family putative methylase [Lyngbya majuscula 3L]
          Length = 315

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 8/213 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           WR F    L +S     PRPETE L+D A+   ++            DLGTG+GA+   L
Sbjct: 102 WRHF---SLRVSPAVLIPRPETESLIDLAVNGVAMSSTPDLSSGHWADLGTGSGAIACGL 158

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172
            +  P      VD + +AL IA+ NA   G++E+       W+S +E L      +V+NP
Sbjct: 159 AEVFPHGTIHAVDCTEEALAIAQLNAQQLGMAEKIKFYHGYWYSPLEALKGQLSGMVANP 218

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  E+   +P I+LDGG DGL   R + D    +L   G+  +E+   Q 
Sbjct: 219 PYIPSNSLKQLQPEIYYHEPHIALDGGRDGLDCIRQLIDMSGDYLRPGGVWLIEMMAGQA 278

Query: 233 VDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             VV++ ++   +  +  F D  G DR  L  R
Sbjct: 279 DKVVQLLQNHGSYSEIQIFPDLAGIDRFALAYR 311


>gi|78185424|ref|YP_377859.1| modification methylase HemK [Synechococcus sp. CC9902]
 gi|78169718|gb|ABB26815.1| Modification methylase HemK [Synechococcus sp. CC9902]
          Length = 302

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 10/218 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           RS+  + +  +  WRD     + +SS    PR ETELLVD AL+F+  R  +       D
Sbjct: 80  RSMPLQYLVGVCPWRDLL---IEVSSAALIPRQETELLVDLALSFAGGRPPRSWA----D 132

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           LGTG+GA+ ++L +  P  +G  VD+S  AL +A+ N       +        W+  ++ 
Sbjct: 133 LGTGSGAIAVSLCRAWPEAEGHAVDLSVDALALAEKNLKALAPQQSCRLHHGSWWLPLQA 192

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  +++VSNPPYI S ++  L   VR+ +P ++L  G DGL   R++     R L   
Sbjct: 193 FWGQLEIVVSNPPYIPSPLLGELDPVVREHEPHVALLAGEDGLEAIRSLLMDAPRALAPG 252

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G+  +E  ++Q  +V  +  +  L  V++  D  G  R
Sbjct: 253 GVLFLEHHHDQSENVQDLMRAAGLVNVSSANDLEGIAR 290


>gi|301308352|ref|ZP_07214306.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Bacteroides sp. 20_3]
 gi|300833822|gb|EFK64438.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Bacteroides sp. 20_3]
          Length = 318

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 48/290 (16%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71
           RV GLS+HQ+++     L D ++F +   IV  L+ ++ I  +LG  DFY +   ++ D 
Sbjct: 31  RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGIEFKVTPDV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +        +    RILD+GTG+G + ++L K  P  +   VDIS 
Sbjct: 90  LIPRPETAELVERIITDY-----RGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL------------------------ 164
           +AL +A+ NA  N VS  F   D L   + S ++G                         
Sbjct: 145 EALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKENKSFTYMKPK 204

Query: 165 -------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
                        F+ IVSNPPYI +     +   V + +P ++L     D L  YR IA
Sbjct: 205 SHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|228917937|ref|ZP_04081473.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228841734|gb|EEM86845.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLD----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRALSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|229076543|ref|ZP_04209503.1| Protein hemK [Bacillus cereus Rock4-18]
 gi|228706576|gb|EEL58789.1| Protein hemK [Bacillus cereus Rock4-18]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 7/255 (2%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE L+   L   + R+   + + + D+GTG+GA+ + L  E+       VDI+
Sbjct: 88  VLIPRPETEELIVGVLE-RIERLFGNEKLHVADIGTGSGAISITLALENKNLHVYTVDIA 146

Query: 131 CKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            +++E+AK NA + G    F   D L    F  ++   DV+VSNPPYI       L   V
Sbjct: 147 RESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLSPVV 204

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFL 246
           ++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +       
Sbjct: 205 KEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFPHAH 264

Query: 247 VNAFKDYGGNDRVLL 261
           V    D  G DR++ 
Sbjct: 265 VEVVFDINGKDRMVF 279


>gi|172058703|ref|YP_001815163.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Exiguobacterium sibiricum 255-15]
 gi|171991224|gb|ACB62146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Exiguobacterium sibiricum 255-15]
          Length = 282

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 18/242 (7%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L+  Q    +  ++  L    +  ++G++ FY     +S     PRPETE L++    F 
Sbjct: 47  LEPEQDLLFSEYLLAHLNGVPVQHLIGYQPFYGRNFRVSPAVLIPRPETEELIE----FV 102

Query: 90  LPRIEKRDVV--RILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNG 145
             R++        I+D+GTG+GA+CL L  E   P      VDIS +A+ +AK N  T G
Sbjct: 103 TGRLQGETFQPGEIVDIGTGSGAICLTLALELGQPV---TTVDISPEAIAVAKENQQTLG 159

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
               F  L+ D  + + +    V+VSNPPYIE    + L   V D +P ++L GG DGL 
Sbjct: 160 GEVTF--LEGDLLAPLADHSVRVLVSNPPYIEE--DELLSDVVFDHEPHLALFGGKDGLV 215

Query: 205 HYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLF 262
            YR + +  +R L  D  L + EIG+NQ  +V  + + R         KD  G DR++  
Sbjct: 216 FYRRLLEDSARVLRDDFRLIAFEIGHNQGQEVQMMLKKRYPTVETGILKDINGKDRIVYA 275

Query: 263 CR 264
            R
Sbjct: 276 ER 277


>gi|229118824|ref|ZP_04248173.1| Protein hemK [Bacillus cereus Rock1-3]
 gi|228664625|gb|EEL20118.1| Protein hemK [Bacillus cereus Rock1-3]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 13/258 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G    F   D L    F  ++   DV+VSNPPYI       L 
Sbjct: 144 DIARESIEVAKENAKSLGAEVTFYHGDLLSP--FYKIDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V    D  G DR++ 
Sbjct: 262 HAHVEVVFDINGKDRMVF 279


>gi|229014498|ref|ZP_04171616.1| Protein hemK [Bacillus mycoides DSM 2048]
 gi|228746848|gb|EEL96733.1| Protein hemK [Bacillus mycoides DSM 2048]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + I D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AQVEVVFDINGKDRMVF 279


>gi|30265351|ref|NP_847728.1| HemK family modification methylase [Bacillus anthracis str. Ames]
 gi|47530890|ref|YP_022239.1| HemK family modification methylase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188163|ref|YP_031416.1| HemK family modification methylase [Bacillus anthracis str. Sterne]
 gi|165871296|ref|ZP_02215945.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
 gi|167636691|ref|ZP_02394979.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
 gi|170688140|ref|ZP_02879351.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0465]
 gi|170709377|ref|ZP_02899790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0389]
 gi|177651883|ref|ZP_02934466.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0174]
 gi|196042385|ref|ZP_03109650.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus NVH0597-99]
 gi|227818091|ref|YP_002818100.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CDC 684]
 gi|228930336|ref|ZP_04093340.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228936613|ref|ZP_04099407.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|229094440|ref|ZP_04225512.1| Protein hemK [Bacillus cereus Rock3-42]
 gi|229602075|ref|YP_002869543.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0248]
 gi|254686249|ref|ZP_05150108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CNEVA-9066]
 gi|254724244|ref|ZP_05186028.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A1055]
 gi|254735256|ref|ZP_05192965.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Western North America USA6153]
 gi|254744459|ref|ZP_05202139.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Kruger B]
 gi|254755797|ref|ZP_05207829.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Vollum]
 gi|254762137|ref|ZP_05213983.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Australia 94]
 gi|301056796|ref|YP_003795007.1| HemK family modification methylase [Bacillus anthracis CI]
 gi|30260029|gb|AAP29214.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Ames]
 gi|47506038|gb|AAT34714.1| modification methylase, HemK family [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182090|gb|AAT57466.1| modification methylase, HemK family [Bacillus anthracis str.
           Sterne]
 gi|164712963|gb|EDR18491.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
 gi|167527891|gb|EDR90713.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
 gi|170125725|gb|EDS94639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0389]
 gi|170667833|gb|EDT18585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0465]
 gi|172082587|gb|EDT67651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0174]
 gi|196026777|gb|EDX65419.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus NVH0597-99]
 gi|227005279|gb|ACP15022.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CDC 684]
 gi|228688977|gb|EEL42804.1| Protein hemK [Bacillus cereus Rock3-42]
 gi|228823048|gb|EEM68886.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228829322|gb|EEM74955.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|229266483|gb|ACQ48120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0248]
 gi|300378965|gb|ADK07869.1| modification methylase, HemK family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|254796528|ref|YP_003081364.1| modification methylase, HemK family [Neorickettsia risticii str.
           Illinois]
 gi|254589765|gb|ACT69127.1| modification methylase, HemK family [Neorickettsia risticii str.
           Illinois]
          Length = 289

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 12/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  L+  Q+I+  +  +   Q       ++   K  S+  I+G ++F+    
Sbjct: 36  DAELLLAHVLSLNREQLILYCNEGMTKSQATDFA-MLLELRKSHSVAAIVGEKEFWKYSF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++ D   PRP+TE ++ + L+    R +K    ++I++LGTG+G V +++LKE     G
Sbjct: 95  AVNKDVLIPRPDTETMLIALLS----RYKKLTQPLKIVELGTGSGCVIISILKEFRNALG 150

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVD 181
            G + S  A  +   N +  G+  R    + D+ S++  L    DVIVSNPPYI    + 
Sbjct: 151 FGFEKSKAAFYLTMRNMLKYGLRARLKLYRLDFDSAMRVLSCKVDVIVSNPPYIRRGEIP 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++ +PRI+LDGG +G+  Y +I    S+ L   G   +EIG + +  +V     
Sbjct: 211 YLQQEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGNSWRDSIVSANCP 269

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
            K  ++  ++D  G +R+L+ 
Sbjct: 270 FK--IIERYRDLSGTERILVL 288


>gi|29349137|ref|NP_812640.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253571300|ref|ZP_04848707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341045|gb|AAO78834.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251839253|gb|EES67337.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 278

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 122/257 (47%), Gaps = 12/257 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G+ +  + +  D +L   ++  L N I R  K+E I  I G+ +F      ++   
Sbjct: 30  CDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LVD  +       E  D  R+LD+GTG+G + ++L K  P  K    DIS 
Sbjct: 90  LIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKNLPDAKVDAWDISE 143

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N     +  +    + D FS+  ++G  +D+IVSNPPY+       +   V 
Sbjct: 144 EALAIARKN--NEELDAQVTFRRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEANVL 201

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  YR IA+     L   G    EI      D++R+ E  +   V
Sbjct: 202 DWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQYRDV 261

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G DR+L   R
Sbjct: 262 RVIKDIFGKDRILTANR 278


>gi|229136147|ref|ZP_04264900.1| Protein hemK [Bacillus cereus BDRD-ST196]
 gi|228647306|gb|EEL03388.1| Protein hemK [Bacillus cereus BDRD-ST196]
          Length = 283

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEESFAEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + I D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AQVEVVFDINGKDRMVF 279


>gi|49476827|ref|YP_039321.1| HemK family modification methylase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328383|gb|AAT59029.1| modification methylase, HemK family [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 283

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKDLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|305667254|ref|YP_003863541.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
 gi|88708188|gb|EAR00426.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
          Length = 481

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 123/249 (49%), Gaps = 27/249 (10%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           + P  ++   +   L  A+ +      I  ILG   F N+   ++ +   PRPETE LV 
Sbjct: 44  LQPSLIIKKEEEQPLFEALSQLKLERPIQYILGLTQFMNLEFKVNENVLIPRPETEDLV- 102

Query: 84  SALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
               + +  +E  +  + ILD+GTG+G + ++L K  P  K   +DIS KALE+AK NA+
Sbjct: 103 ---RWIVSDLEHGKSEINILDIGTGSGCIAVSLAKLLPNSKVYALDISNKALEVAKKNAI 159

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---D 197
            N V   F  LQ+D  +   +   FDVIVSNPPY+  +    +   V D +P ++L   D
Sbjct: 160 LNQVEVEF--LQADVLTLKELHLKFDVIVSNPPYVRMLEKTEMNKNVLDNEPELALFVED 217

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF------K 251
              D L  YR I D    +L+++G    E+  NQ +      E  K  L + F      K
Sbjct: 218 N--DALVFYRKIVDFAKENLDQNGSLYFEV--NQYMG-----EETKSLLKSYFSEVELRK 268

Query: 252 DYGGNDRVL 260
           D  GN+R+L
Sbjct: 269 DIFGNNRML 277


>gi|228988554|ref|ZP_04148641.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228771171|gb|EEM19650.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 283

 Score =  100 bits (248), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETSQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|332885937|gb|EGK06181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dysgonomonas mossii DSM 22836]
          Length = 296

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%), Gaps = 11/251 (4%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
            +T  S  Q ++   + L + Q   L + + R    E I  I+G  +F+ +   ++ D  
Sbjct: 48  HITKRSYPQAVIS-GTKLTEEQTILLHSILDRLKTFEPIQYIIGETEFFGLPFHVTKDVL 106

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV+  L  +     K+  +++LD+GTG+GA+ +AL K          DIS +
Sbjct: 107 IPRPETEELVELILNEN-----KKSGLKVLDIGTGSGAIAIALAKHLEKADIEAWDISEE 161

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           AL+IA  N+ +N V+  F  +        +  FD+IVSNPPYI       +   V D++P
Sbjct: 162 ALKIATLNSDSNAVNIIFRNVDVLKNYPTDTKFDIIVSNPPYILEKEKSGMDQNVLDYEP 221

Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             +L   D   +GL  Y  IAD     L  +G    EI   +  D V++ +S+    V  
Sbjct: 222 HTALFVPDN--NGLLFYDRIADIALDLLEPNGKLYFEINQRKGEDTVQLVKSKGFINVCL 279

Query: 250 FKDYGGNDRVL 260
           F+D   NDR++
Sbjct: 280 FQDLNKNDRMV 290


>gi|298369665|ref|ZP_06980982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282222|gb|EFI23710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 274

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 118/260 (45%), Gaps = 13/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L R  G +  Q++    S + +           R ++ E +  ILG R+FY    
Sbjct: 17  EARMLLQRALGCTRVQLLTQGGSEMSEHAAATAQELAHRRIQGEPMAYILGEREFYGRMF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETE LV++ L    P+       R+ DLGTG+GAV +++  E P  +  
Sbjct: 77  RVNPDVLIPRPETEHLVEAVLDRLPPQ------GRVWDLGTGSGAVAVSIALERPDARVR 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
             DIS  AL  A  NA   G    F      WF     S +  +D+IVSNPPYIE+    
Sbjct: 131 ASDISAAALHTAAQNAAALGADIEFAL--GSWFDTDRPSEKKSYDIIVSNPPYIEAGDAH 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P+ +L    DGLS  R +A G   +L   G   +E G  Q   V  +   
Sbjct: 189 LEQGDLR-FEPQGALTDFSDGLSCIRALAAGSPAYLKNGGWLLLEHGCGQGAQVRAVLAE 247

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                ++   D  G DRV L
Sbjct: 248 HGFSRIDTLPDLAGLDRVTL 267


>gi|282900758|ref|ZP_06308700.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505]
 gi|281194558|gb|EFA69513.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505]
          Length = 297

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 97/178 (54%), Gaps = 9/178 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR F    L +S     PRPETE+L+D  +  +   ++    V   DLGTG+GA+ L L 
Sbjct: 90  WRKF---TLAVSDAVLIPRPETEILIDLVMEAANQDLQSGIWV---DLGTGSGAIALGLA 143

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173
           +     K   +DIS +AL +A++NA   G ++R +  Q  W+   + ++G    +VSNPP
Sbjct: 144 EVLTNAKIYAIDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLQGKISGMVSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI S ++  L  EV + +P ++LDGG+DGL   R + +    +L   G+  +E+   Q
Sbjct: 204 YIPSDMIGTLEPEVVEHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQ 261


>gi|229170036|ref|ZP_04297728.1| Protein hemK [Bacillus cereus AH621]
 gi|228613461|gb|EEK70594.1| Protein hemK [Bacillus cereus AH621]
          Length = 283

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 11/257 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGMLMNMREEITAEQEKSFEEFIHKHVEGIPIQYMLGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + I D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGNEELHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGADVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLST 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +     
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFPR 262

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G DR++ 
Sbjct: 263 AQVEVVFDINGKDRMVF 279


>gi|210634611|ref|ZP_03298188.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279]
 gi|210158739|gb|EEA89710.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279]
          Length = 357

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 131/311 (42%), Gaps = 57/311 (18%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  VTG+S  ++ +  D  +D R+   +  A+VR  K E +  I G   F  + + 
Sbjct: 31  AEWLLSSVTGMSRTELYMSFDKPMDPRELDAMHAAVVRRAKGEPLQYIAGETTFRMIDVA 90

Query: 67  LSSDTFEPRPETELLVDSALAF-----------SLPRIE--------------------- 94
                  PRPETELLV+  L +           S  RIE                     
Sbjct: 91  CEEGVLIPRPETELLVEEVLTYIDREVLGGAVASRARIELPWNSEVQAAREAEEKEAAAD 150

Query: 95  ----------------KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIA 137
                           +  V R+L++G GTG + L++  E       V  DI  +A+++A
Sbjct: 151 AAASDSVVEEVEGSSGEDAVARVLEVGCGTGCISLSIASERRDRVAVVATDIEPRAVDLA 210

Query: 138 KSNAVTNGVSE-----RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
             N    G+       R   L S      E G FDV+VSNPPYI + ++  L  EV DF+
Sbjct: 211 ARNRDALGIDAKTVDIRLGNLVSPLDRETEWGTFDVLVSNPPYIPTDVMATLPHEVADFE 270

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAF 250
           P ++LDGG DGL  +R +       L K+GL + E+ Y   +D    +  +  +  V   
Sbjct: 271 PSLALDGGTDGLDIFRRLVSAAPFMLRKNGLLACEL-YEGHLDAAADLCRAAGMEDVRIV 329

Query: 251 KDYGGNDRVLL 261
            D  G  R++L
Sbjct: 330 DDLTGRPRIVL 340


>gi|110803251|ref|YP_699477.1| HemK family modification methylase [Clostridium perfringens SM101]
 gi|110683752|gb|ABG87122.1| modification methylase, HemK family [Clostridium perfringens SM101]
          Length = 587

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       +I + +  +         N + +      +  ILG  +F  +  
Sbjct: 326 DTQLLLGKILEKDKIWLITNKNEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L          
Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + +++ 
Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +   +
Sbjct: 502 LMKDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 561

Query: 243 KLFLVNAFKDYGGNDRVLL 261
             + V   KD  G DR ++
Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580


>gi|262382449|ref|ZP_06075586.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298374644|ref|ZP_06984602.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19]
 gi|262295327|gb|EEY83258.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298269012|gb|EFI10667.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19]
          Length = 318

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 127/290 (43%), Gaps = 48/290 (16%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71
           RV GLS+HQ+++     L D ++F +   IV  L+ ++ I  +LG  DFY +   ++ D 
Sbjct: 31  RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +        +    RILD+GTG+G + ++L K  P  +   VDIS 
Sbjct: 90  LIPRPETAELVERIITDY-----RGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL------------------------ 164
           +AL +A+ NA  N VS  F   D L   + S ++G                         
Sbjct: 145 EALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKENKSFTYMKPK 204

Query: 165 -------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
                        F+ IVSNPPYI +     +   V + +P ++L     D L  YR IA
Sbjct: 205 SHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|315223720|ref|ZP_07865570.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
           F0287]
 gi|314946295|gb|EFS98294.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
           F0287]
          Length = 281

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 13/225 (5%)

Query: 42  IVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           ++R L+  + I  ILG  +F++ R  ++ +   PRPETE LVD  L    P  +K + ++
Sbjct: 61  VIRELQTAKPIQYILGETEFFSNRFFVNENVLIPRPETEELVDWVLQ-EYP--DKSEKIK 117

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           ILD+GTG+G + ++L K  P      +D+S  AL++AK NA  N V   F  LQ D    
Sbjct: 118 ILDVGTGSGCIAISLAKALPNAVVTAIDVSEGALKVAKRNAELNNVVTHF--LQQDILRI 175

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSR 215
            ++   +D+I+SNPPY+  +    +   V +++P ++L   D   + L  Y  IA    +
Sbjct: 176 ETLPDKYDIIISNPPYVRELEKKEIRHNVLEYEPHLALFVRDN--NPLLFYDKIATLAQQ 233

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            LN +G    EI      ++  + E +    +   +D  GNDR++
Sbjct: 234 SLNPNGSLFFEINQYLGQEMKTLLEQKHFTEITLRQDLFGNDRMI 278


>gi|297559305|ref|YP_003678279.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296843753|gb|ADH65773.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 287

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 6/227 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  I G   F  + L +    F PRPETE++VD A+  +L  ++  D + +
Sbjct: 58  VSRREAREPLQHITGRAYFRYLELRVGPGVFVPRPETEIMVDWAIQ-TLRAMDVADPL-V 115

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158
           +DLGTG+GA+ +++ +E P  +   V++   AL  A+ N   +G ++R  +   D     
Sbjct: 116 VDLGTGSGAIAISIAQEVPRSRVHTVEVDPDALAWARRNIDASGHADRVTSHHGDMRTAL 175

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             + G  D+++SNPPY+ +     +  EVRD+DP  +L  G DGL   R +     R L 
Sbjct: 176 PQLNGRVDLLISNPPYVPTREAGAIPPEVRDYDPAPALWSGEDGLDMIRALEAVGRRLLR 235

Query: 219 KDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
             G  +VE    Q +D+  +F E R    V   KD    DR ++  R
Sbjct: 236 PGGAMAVEHHDGQGIDIPWLFPEDRGWRDVLNRKDLARRDRFVVMRR 282


>gi|217962817|ref|YP_002341395.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH187]
 gi|217067117|gb|ACJ81367.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH187]
          Length = 283

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFSDEKIHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  ++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQGSIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|261855645|ref|YP_003262928.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halothiobacillus neapolitanus c2]
 gi|261836114|gb|ACX95881.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halothiobacillus neapolitanus c2]
          Length = 286

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D  S + ++ GL   + +++ + +L       L +A  R    E +  I G++ F+ 
Sbjct: 26  AMVDIRSLVSQLAGLDRARQLMELERLLPSATAARLRSAFERRAAGEPVAYITGFKPFWR 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++  T  PRPETE L++    ++L +I  +  + + DLGTG+G + ++L  E P  
Sbjct: 86  HEFLVTPATLIPRPETEHLLE----WALEKIPPQQALTVADLGTGSGVLAISLAIERPQI 141

Query: 123 KGVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYI 175
           +  G D+S  AL +A+ N   +    +     LQ  W     G+F     DVIVSNPPYI
Sbjct: 142 QVFGCDLSRDALLVARENESRLRADAALPIRWLQGSWL----GMFKPESLDVIVSNPPYI 197

Query: 176 ESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                D   L + D  F+P+ +L    +G++ YR I +  S  L   G    E GY+Q  
Sbjct: 198 RP---DDPHLAIGDLRFEPQSALVAQDEGMADYRQIIEQASTRLKPGGWILFEHGYDQAN 254

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
            V      +    ++   D  G  R
Sbjct: 255 AVAECLAQKGFQTISHRTDLAGQVR 279


>gi|163789459|ref|ZP_02183898.1| hemK protein [Carnobacterium sp. AT7]
 gi|159875313|gb|EDP69378.1| hemK protein [Carnobacterium sp. AT7]
          Length = 282

 Score =  100 bits (248), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 111/212 (52%), Gaps = 8/212 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           + +I+G+  FY+ +  ++ DT  PRPETE +VD      L        + +LD+GTGTG 
Sbjct: 72  VQQIVGYGWFYDRKFKVTKDTLIPRPETEEIVD----IFLKETSTNQKLTVLDIGTGTGI 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + + + KE P F     D+S KAL++AK NA    +S     L+ D    V+   FDVI+
Sbjct: 128 IGITIKKERPLFDVTATDLSSKALKVAKENA--ESLSAEVRLLEGDLTEPVKKETFDVII 185

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI +  V  +   V  ++P ++L    +GL+ Y+ +A      LN  G   +EIG+
Sbjct: 186 SNPPYISTDEVGYMDESVLHYEPHLALFAENNGLAIYQRLAKETPAILNPGGEILLEIGF 245

Query: 230 NQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
            Q   V  IF+       V   KD  GNDR++
Sbjct: 246 KQGKSVQEIFQQAFPKAEVAIGKDMSGNDRLI 277


>gi|300812482|ref|ZP_07092908.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|313123398|ref|YP_004033657.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|300496543|gb|EFK31639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|312279961|gb|ADQ60680.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 280

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 19/260 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125
               PR ETE LV+ ALA     ++  D V  LDLGTG+G + +AL KE+   KG+    
Sbjct: 87  GVLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLH 139

Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + +
Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F + K
Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALF-AEK 255

Query: 244 L--FLVNAFKDYGGNDRVLL 261
           L  F V   +D  G  R+L 
Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275


>gi|255532070|ref|YP_003092442.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
 gi|255345054|gb|ACU04380.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
          Length = 288

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 3/236 (1%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD ++ F L N +      + +  +LG   FY +   L      PRPETE LV   L  +
Sbjct: 50  LDSKELFILQNILTELQSGKPLQYVLGETVFYGLPFKLGPSVLIPRPETEELVAWVLEST 109

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                    +R++D+GTG+G + ++L K  P  +   +D+S  A++IA SNA+ N V  +
Sbjct: 110 ALEAVTGAALRLIDIGTGSGCIAISLKKNFPEAEVSALDVSEAAIDIAGSNALLNEVDIK 169

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRT 208
           F       F++ +  FDV+VSNPPYI     + +   V + +P ++L    +  L  Y  
Sbjct: 170 FIQADIREFTTKQK-FDVVVSNPPYITLKEKEQMQDHVLNHEPHLALFVSNEAPLVFYEA 228

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           IAD     L+  GL   EI  +   + V + E++    +   KD  G DR ++ CR
Sbjct: 229 IADFAWTTLSGRGLLFFEINEHLGKETVELLEAKSFTDIILKKDMQGKDR-MIRCR 283


>gi|282861118|ref|ZP_06270183.1| modification methylase, HemK family [Streptomyces sp. ACTE]
 gi|282563776|gb|EFB69313.1| modification methylase, HemK family [Streptomyces sp. ACTE]
          Length = 281

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 13/241 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++   PD+  D   R++ T  + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHNVPDADFD--ARYWET--VARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LA+ +E P  +
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALAMAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             GV++S  AL   + NA  + V+  R D L +      +G  D+++SNPPYI     + 
Sbjct: 138 VHGVELSEDALRWTRKNAEGSRVTLHRQDALSA--LPEFDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD DP+++L  G DGL   R I     R L   GL  +E    Q   V  IF   
Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 243 K 243
           +
Sbjct: 256 R 256


>gi|15896139|ref|NP_349488.1| S-adenosylmethionine-dependent methyltransferase, HEMK ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|15025933|gb|AAK80828.1|AE007786_1 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|325510293|gb|ADZ21929.1| S-adenosylmethionine-dependent methyltransferase [Clostridium
           acetobutylicum EA 2018]
          Length = 285

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRP+TE+LV++ L +    IE  +  ++ D+ TG+GA+ L++ K +   + +  DIS  A
Sbjct: 93  PRPDTEILVEAVLEY----IELNNYKKVCDVCTGSGAIGLSIAKYAKDVEVLCSDISPDA 148

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS-VE--GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           + ++K N     + +R      D     +E    FD++VSNPPYI    +  L  +V+D+
Sbjct: 149 IRVSKINRQGLNLEDRVKIENGDLLEKPIERGEKFDIVVSNPPYIREDEIPKLMDDVKDY 208

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P I+L GG DGL  YR I     + L   GL + EIG ++  +V  I E+     +   
Sbjct: 209 EPIIALVGGEDGLDFYRRITSMSKKVLKPGGLIAYEIGSDEANEVSNILENEGFVSIETR 268

Query: 251 KDYGGNDRVLLFCR 264
           KD+   DRV+L  R
Sbjct: 269 KDFARMDRVVLAVR 282


>gi|325125450|gb|ADY84780.1| Protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 280

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 19/260 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125
               PR ETE LV+ ALA     ++  D V  LDLGTG+G + +AL KE+   KG+    
Sbjct: 87  GVLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLH 139

Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + +
Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F + K
Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEK 255

Query: 244 L--FLVNAFKDYGGNDRVLL 261
           L  F V   +D  G  R+L 
Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275


>gi|257440234|ref|ZP_05615989.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii A2-165]
 gi|257197268|gb|EEU95552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii A2-165]
          Length = 283

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 10/239 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+ L   Q   L     R    E +  + G   F +  L +      PR +TE++ ++A 
Sbjct: 47  DAPLGAEQAERLEALTARRAAREPLQYLCGSWPFLDFELAVGPGVLCPRADTEVVAEAAA 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 +   +  R+LDL  GTG + L + +  P  +   ++ S  A    + NA  + V
Sbjct: 107 GM----LAGVEAPRVLDLCAGTGCLGLGVKRFCPAAQVTSLEKSPAAYRYLEQNAHLSPV 162

Query: 147 SERFDTLQSD----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                 +Q D    W +  EG  D+IVSNPPY+ +  +  L  EV   +P ++L+ G DG
Sbjct: 163 LT-ITPVQGDLFTYWQTLPEGQLDLIVSNPPYLTAAEMGALQPEVAQ-EPAMALEAGEDG 220

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  YR IA+   + L   G  ++EIG+ Q+  V  +  +     +   KD+GGNDR ++
Sbjct: 221 LVFYRAIAEHYQKVLRPGGALALEIGWQQREAVTALLAANGWTDIVCRKDFGGNDRCVM 279


>gi|119509583|ref|ZP_01628730.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414]
 gi|119465772|gb|EAW46662.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414]
          Length = 304

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--- 102
           L  + I  +  WR F   ++ +S+    PRPETE L+D A+A +     K      L   
Sbjct: 82  LPVQYITGVTPWRQF---KIAVSNAVLIPRPETEYLIDLAVAAA----TKSGAAPFLNSG 134

Query: 103 ---DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
              DLGTG+GA+ L L    P      VD S +AL+IA+ NA   G   +    Q  W+ 
Sbjct: 135 HWADLGTGSGAIALGLADAFPKATIHAVDYSPEALKIARDNARNLGFDNQIKFYQGSWWE 194

Query: 159 --SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             ++++G F  +VSNPPYI +  V  L  EV   +P ++LDGG DGL   R + +    +
Sbjct: 195 PLAALKGEFSGMVSNPPYIPTSTVATLQPEVVKHEPHLALDGGSDGLDCIRQLIEISPGY 254

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E+   Q  D VR   +++
Sbjct: 255 LRPGGVWLIEMMAGQ-ADTVRTLLAKQ 280


>gi|47570470|ref|ZP_00241103.1| hemK protein [Bacillus cereus G9241]
 gi|47552866|gb|EAL11284.1| hemK protein [Bacillus cereus G9241]
          Length = 283

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFKEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFDDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEIVFDINGKDRMVF 279


>gi|229087818|ref|ZP_04219934.1| Protein hemK [Bacillus cereus Rock3-44]
 gi|228695493|gb|EEL48362.1| Protein hemK [Bacillus cereus Rock3-44]
          Length = 283

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 5/254 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    + + Q    T  I + +    +  ++G+  FY     ++ +
Sbjct: 28  LCHVLKTNRTGLMMNMREEISEEQEKTFTEFIHKHVDGIPVQYMMGYEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE L+   L   + R+  +  + + D+GTG+GA+ + L  E+       VDI+
Sbjct: 88  VLIPRPETEELIVGVLD-RVQRMFGKQELHVADIGTGSGAISITLALENQNLHVYTVDIA 146

Query: 131 CKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +++E+A+ NA   G +  F    L S ++ + + L DV+VSNPPYI       L   V+
Sbjct: 147 KESIEVAQENANALGANVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSPVVK 205

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-V 247
           + +P+ +L GG DGL  YR   + +   L K  + + E+G  Q  DV  + +    +  V
Sbjct: 206 EHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEVGIGQGEDVKGLLQKTFPYAHV 265

Query: 248 NAFKDYGGNDRVLL 261
               D  G DR++ 
Sbjct: 266 EVVFDINGKDRMVF 279


>gi|104773786|ref|YP_618766.1| methylase of polypeptide chain release factors [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422867|emb|CAI97529.1| Methylase of polypeptide chain release factors [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 273

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 19/259 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++  
Sbjct: 21  LAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAKG 80

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+ ALA     ++  D V  LDLGTG+G + +AL KE+   KG+     
Sbjct: 81  VLIPRFETEELVEWALA----HLQDGDTV--LDLGTGSGNITVALAKEAES-KGIKDLHF 133

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F + KL
Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEKL 249

Query: 245 --FLVNAFKDYGGNDRVLL 261
             F V   +D  G  R+L 
Sbjct: 250 PDFKVEFRRDMAGKPRMLF 268


>gi|42784500|ref|NP_981747.1| HemK family modification methylase [Bacillus cereus ATCC 10987]
 gi|42740432|gb|AAS44355.1| modification methylase, HemK family [Bacillus cereus ATCC 10987]
          Length = 283

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGILMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+A+ NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAQENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderiales bacterium 1_1_47]
 gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderiales bacterium 1_1_47]
          Length = 267

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L  V G+     ++  D VL   +   L +   +  +   +  +LG ++F+    
Sbjct: 17  DKSFMLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE LV+  L   LP+        + DLGTG+G +   +  E P     
Sbjct: 77  LVNPSVLIPRSDTECLVE-WLIEHLPK-----NALVCDLGTGSGCIAATVALERPDLTVW 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
             D+S  AL +A++N    G   +   +Q  W      E  FD ++SNPPYIE    D  
Sbjct: 131 ASDLSESALAVAQANCKALGADVKL--VQGSWLDPYPAELSFDAVISNPPYIER---DDK 185

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            L+   ++PR +L    DGL  YRTI   + R   K  L +VE G+NQ   V  IFE   
Sbjct: 186 HLDALRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENG 245

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                 F+DYG N R   + +
Sbjct: 246 FKGSATFRDYGNNPRFTTWIK 266


>gi|86156793|ref|YP_463578.1| HemK family modification methylase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773304|gb|ABC80141.1| [protein release factor]-glutamine N5-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 286

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 25/236 (10%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H+  C        ++ +D D  L   +       + R  + E    + G RDFY     
Sbjct: 37  AHALRC-----ERMRLYLDFDKPLGAPELAAFRELVRRRGEGEPTAYLTGRRDFYGRPFR 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFF 122
           + +    PRPETEL++++A          RD +      LDL TG+GA+ ++L  E    
Sbjct: 92  VDARVLVPRPETELVLEAA----------RDALPEGGAALDLCTGSGALGVSLALERAGA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEG-LFDVIVSNPPYIESVIV 180
           + V  D+S  AL +A+ NA   G +   D  Q D W +  EG  FDVIVSNPPY+    +
Sbjct: 142 RVVATDLSADALVVAEENARALGAA--VDLRQGDLWAALREGERFDVIVSNPPYVPRGEL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           D L  EVR  +PR++LDGG DGL   R I +G    L   G   +E+ + + +DV+
Sbjct: 200 DTLPREVRR-EPRLALDGGPDGLDLLRRIVEGAPARLVPGGTLVLEM-HERHLDVL 253


>gi|333029740|ref|ZP_08457801.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides coprosuis DSM 18011]
 gi|332740337|gb|EGJ70819.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides coprosuis DSM 18011]
          Length = 277

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 117/261 (44%), Gaps = 8/261 (3%)

Query: 2   QALRDSHSFLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           Q L+     +CR +  L    V +  D  L   +R  L  +I R   HE I  + G   F
Sbjct: 19  QELKSITMVICRDILKLDEMDVYLRKDIKLSRSKRDRLKQSIKRLQNHEPIQYVSGSAYF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  R  +      PRPETE LVD  L       E +    +LD+GTG+G + +++ K +P
Sbjct: 79  YGSRFRVKQGVLIPRPETEELVDLILR------ENKGRYALLDIGTGSGCIAISIAKNNP 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             K    D+S  AL+IA+SN        RF       + S +  FDVIVSNPPYI +   
Sbjct: 133 EAKVEAWDVSDDALKIARSNNKKLETHVRFRKQDILTYHSKKRKFDVIVSNPPYITNKEK 192

Query: 181 DCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V +++P ++L     + L  Y  I +     L + G    EI     V V ++ 
Sbjct: 193 KLMDKNVLNWEPEVALFVEDHNPLLFYNRIGEVGLFLLRRGGRLYFEINQAYGVQVAKLL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E +    V   KD  G DR++
Sbjct: 253 EQKGYKNVQVLKDLFGKDRIV 273


>gi|295115023|emb|CBL35870.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SM4/1]
          Length = 338

 Score = 99.8 bits (247), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 40/245 (16%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G 
Sbjct: 92  LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142
           + L+L     +      D+S  AL +A  NA                             
Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206

Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                  N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++
Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           LDG  DGL  YR +A+   +HL + G    EIG  Q   V  +   +    +   KD  G
Sbjct: 267 LDGSADGLHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326

Query: 256 NDRVL 260
            DRV+
Sbjct: 327 LDRVV 331


>gi|283798431|ref|ZP_06347584.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1]
 gi|291073836|gb|EFE11200.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1]
          Length = 338

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 40/245 (16%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G 
Sbjct: 92  LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142
           + L+L     +      D+S  AL +A  NA                             
Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206

Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                  N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++
Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           LDG  DGL  YR +A+   +HL + G    EIG  Q   V  +   +    +   KD  G
Sbjct: 267 LDGSADGLHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326

Query: 256 NDRVL 260
            DRV+
Sbjct: 327 LDRVV 331


>gi|182420442|ref|ZP_02641457.2| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens NCTC 8239]
 gi|182382208|gb|EDT79687.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens NCTC 8239]
          Length = 572

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       +I +    +         N + +      +  ILG  +F  +  
Sbjct: 311 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 370

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L          
Sbjct: 371 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 426

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + +++ 
Sbjct: 427 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 486

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +   +
Sbjct: 487 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 546

Query: 243 KLFLVNAFKDYGGNDRVLL 261
             + V   KD  G DR ++
Sbjct: 547 GYYDVKVIKDLAGLDRCVI 565


>gi|299782949|gb|ADJ40947.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum CECT 5716]
          Length = 283

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI R    E    ++G   F+  +  ++ D   P  ETE LV+  L  S+P  ++   ++
Sbjct: 62  AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG+G + + L  E P ++    DIS  AL+IA +N   +G +   + ++SD F+ 
Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + +  FD+IV+NPPY+    +D +  EV +++P ++L    +GL+ YR +      HL  
Sbjct: 176 LGDQRFDLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235

Query: 220 DGLCSVEIGYNQKVDVVRIFE 240
            G+   E G+ Q+  + R+ +
Sbjct: 236 RGVLFGETGHRQEERIQRLLK 256


>gi|110798817|ref|YP_696881.1| HemK family methyltransferase [Clostridium perfringens ATCC 13124]
 gi|168210132|ref|ZP_02635757.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC
           3626]
 gi|110673464|gb|ABG82451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens ATCC 13124]
 gi|170711816|gb|EDT23998.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC
           3626]
          Length = 587

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       +I +    +         N + +      +  ILG  +F  +  
Sbjct: 326 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L          
Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + +++ 
Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +   +
Sbjct: 502 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEILKENGILAFEIGHDQGEDVKNLMIEK 561

Query: 243 KLFLVNAFKDYGGNDRVLL 261
             + V   KD  G DR ++
Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580


>gi|284037819|ref|YP_003387749.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
 gi|283817112|gb|ADB38950.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
          Length = 282

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 27/225 (12%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           + E I  ++G   F  +   +S D   PRPETE LV   +     R+   D V ILD+GT
Sbjct: 66  RQEPIQHVIGTTIFCGLEFEVSPDVLIPRPETEDLVRLIMHDFADRV---DDVPILDIGT 122

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164
           G+G + + + +  P     G D+S KAL +A+ NA         + L++D   S++ +  
Sbjct: 123 GSGCIAITMARFLPQSVVTGWDVSEKALTLARQNA---------EHLKADVQFSIQDILN 173

Query: 165 --------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGV 213
                   FD +VSNPPY+       +   V D++P ++L   D   D L  Y+ +AD  
Sbjct: 174 VPADFNERFDCVVSNPPYVTRSEAAEMDRNVLDYEPDLALFVEDN--DPLVFYKAVADFC 231

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            RHL KDG C VEI         ++F  R    +  +KD  G DR
Sbjct: 232 VRHLTKDGACYVEINERFGEATRQVFADRGFTKIQVYKDIHGKDR 276


>gi|168213693|ref|ZP_02639318.1| protein- methyltransferase, release factor-specific [Clostridium
           perfringens CPE str. F4969]
 gi|170714843|gb|EDT27025.1| protein- methyltransferase, release factor-specific [Clostridium
           perfringens CPE str. F4969]
          Length = 587

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       +I +    +         N + +      +  ILG  +F  +  
Sbjct: 326 DTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGLDF 385

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L          
Sbjct: 386 YVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNIIVD 441

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + +++ 
Sbjct: 442 LVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVINT 501

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +   +
Sbjct: 502 LMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMIEK 561

Query: 243 KLFLVNAFKDYGGNDRVLL 261
             + V   KD  G DR ++
Sbjct: 562 GYYDVKVIKDLAGLDRCVI 580


>gi|253681154|ref|ZP_04861957.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum D str. 1873]
 gi|253563003|gb|EES92449.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum D str. 1873]
          Length = 282

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%), Gaps = 17/239 (7%)

Query: 30  LDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L D++ FF    +++  K +  +  ILG  +F  +   +      PR +TE+LV+  +  
Sbjct: 51  LKDQEEFF---KLIKLRKDKMPVKYILGECEFMGLNFNVKEGVLIPRADTEVLVEEVIK- 106

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNG 145
               I++     + D+  G+GA+ +++ K   + K   +D   IS  A+E+ K+N     
Sbjct: 107 ---EIKENGYNNVCDVCCGSGAIGISIGK---YIKETIIDCYDISDIAIEVTKNNINKFQ 160

Query: 146 VSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           ++ +    +SD     +    ++DVIVSNPPYI+  ++  L  +V++++P I+L GG DG
Sbjct: 161 LNNKVYVYKSDLLDEAKRQNKMYDVIVSNPPYIKEEVIPTLMKDVKEYEPYIALCGGKDG 220

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  Y  I       LN+ GL + EIGY+Q  +V  I        +   KD  G DRV++
Sbjct: 221 LYFYNKITKNSVDFLNRGGLLAFEIGYDQGKEVKDILIENGFSNIKVIKDLAGLDRVVM 279


>gi|147669661|ref|YP_001214479.1| HemK family modification methylase [Dehalococcoides sp. BAV1]
 gi|146270609|gb|ABQ17601.1| modification methylase, HemK family [Dehalococcoides sp. BAV1]
          Length = 277

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 10/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       + R L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQRRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+      
Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240
            L     + +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + + I +
Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     +    DY G  R++
Sbjct: 252 TLPQASLEIISDYAGIPRIV 271


>gi|325684405|gb|EGD26573.1| protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 280

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 19/260 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---- 125
               PR ETE LV+ AL      +  +D   +LDLGTG+G + +AL KE+   KG+    
Sbjct: 87  GVLIPRFETEELVEWAL------VHLQDGDTVLDLGTGSGNITVALAKEAES-KGIKDLH 139

Query: 126 --GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + +
Sbjct: 140 FYASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F + K
Sbjct: 197 DKGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALF-AEK 255

Query: 244 L--FLVNAFKDYGGNDRVLL 261
           L  F V   +D  G  R+L 
Sbjct: 256 LPDFKVEFRRDMAGKPRMLF 275


>gi|18311185|ref|NP_563119.1| hypothetical protein CPE2203 [Clostridium perfringens str. 13]
 gi|18145868|dbj|BAB81909.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 569

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 8/221 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R LK   +  ILG  +F  +   +      PR +TE++V+  L      I++   + + D
Sbjct: 347 RKLKM-PMQYILGTCEFMGLDFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCD 401

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           L  G+GA+ L+L           VDI     ++ + N     +S+R   ++SD  S V  
Sbjct: 402 LCCGSGAIGLSLANYRKNIIVDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIK 461

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D++VSNPPYI + +++ L  +V+D++P ++LDGG DGL  YR I D     L ++
Sbjct: 462 KGNKYDILVSNPPYIRTEVINTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKEN 521

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G+ + EIG++Q  DV  +   +  + V   KD  G DR ++
Sbjct: 522 GILAFEIGHDQGEDVKNLMIEKGYYDVKVIKDLAGLDRCVI 562


>gi|328954787|ref|YP_004372120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coriobacterium glomerans PW2]
 gi|328455111|gb|AEB06305.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coriobacterium glomerans PW2]
          Length = 337

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 120/292 (41%), Gaps = 40/292 (13%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L   TGL+  ++ +  D  L   +   +   + R    E +  I     F  + +    
Sbjct: 34  LLSAATGLARIELYMSFDRPLGASELDVMHRFVARRSTGEPLQYITEQAMFRTIAIACEP 93

Query: 70  DTFEPRPETELLVDSALAF----------------SLP------------------RIEK 95
               PRPETE+LV   LAF                 LP                  +   
Sbjct: 94  GVLIPRPETEVLVGEVLAFLDHERAPEVLAHRERVELPWNDEVGSSTDEQGMPNPSQTVP 153

Query: 96  RDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL- 153
           RD  RIL++G GTG + LA+  E P   K V  DI   A+ +A+ N V  G+ E   +  
Sbjct: 154 RDAARILEIGCGTGCISLAIASERPGQVKIVATDIDPSAVALAQRNRVALGLDEETISFR 213

Query: 154 QSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + D    V       FDV+VSNPPYI   ++  L  EV  F+P ++LDGG DGL  YR +
Sbjct: 214 EGDLAEPVAPDELAGFDVLVSNPPYIPRAVMADLPREVSAFEPELALDGGADGLQIYRRL 273

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               S  L   GL + E+      +   +     L  V+  +D  G  RVLL
Sbjct: 274 LRLASMALRPGGLLACELYEESLEEAAELARGADLVDVSIVEDLAGRPRVLL 325


>gi|182623922|ref|ZP_02951710.1| methyltransferase, HemK family [Clostridium perfringens D str.
           JGS1721]
 gi|177910815|gb|EDT73169.1| methyltransferase, HemK family [Clostridium perfringens D str.
           JGS1721]
          Length = 587

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 8/221 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R LK   +  ILG  +F  +   +      PR +TE++V+  L      I++   + + D
Sbjct: 365 RKLKM-PMQYILGTCEFMGLDFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCD 419

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           L  G+GA+ L+L           VDI     ++ + N     +S+R   ++SD  S V  
Sbjct: 420 LCCGSGAIGLSLANYRKNIIVDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIK 479

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D++VSNPPYI + +++ L  +V+D++P ++LDGG DGL  YR I D     L ++
Sbjct: 480 KGNKYDILVSNPPYIRTEVINTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKEN 539

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G+ + EIG++Q  DV  +   +  + V   KD  G DR ++
Sbjct: 540 GILAFEIGHDQGEDVKNLMIEKGYYDVKVIKDLAGLDRCVI 580


>gi|150010265|ref|YP_001305008.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis
           ATCC 8503]
 gi|255012466|ref|ZP_05284592.1| putative protoporphyrinogen oxidase [Bacteroides sp. 2_1_7]
 gi|149938689|gb|ABR45386.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis
           ATCC 8503]
          Length = 318

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 126/290 (43%), Gaps = 48/290 (16%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71
           RV GLS+HQ+++     L D ++F +   IV  L+ ++ I  +LG  DFY +   ++ D 
Sbjct: 31  RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +        +    RILD+GTG+G + ++L K  P  +   VDIS 
Sbjct: 90  LIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPEAEVAAVDISP 144

Query: 132 KALEIAKSNAVTNGVS---------------------------ERFDTLQSDWFSSVE-- 162
           +AL +A+ NA  N VS                            RF   ++  F+ V+  
Sbjct: 145 EALAVAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTRNKIFTYVKLK 204

Query: 163 -----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
                      G  + IVSNPPYI       +   V + +P ++L     D L  YR IA
Sbjct: 205 SHTEETEASLIGSLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 265 RFGQRHLAEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|167754863|ref|ZP_02426990.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402]
 gi|237735405|ref|ZP_04565886.1| modification methylase [Mollicutes bacterium D7]
 gi|167704913|gb|EDS19492.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402]
 gi|229381150|gb|EEO31241.1| modification methylase [Coprobacillus sp. D7]
          Length = 285

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 18/223 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I G  +F+     ++ D   PR ETE LV++ L        +   + + D+GTG+GA
Sbjct: 69  IQYIKGVENFFGRDFKVNEDVLIPRYETEELVENILYRIDDYFAEYQSITLCDVGTGSGA 128

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDV 167
           +  +L  E P  K    DIS KA+ +AK NA   G +  F   D L+    + ++   D+
Sbjct: 129 IATSLALEEPRLKVFATDISLKAVTVAKDNAKNLGANIEFMVGDMLEPLLENEIK--VDI 186

Query: 168 IVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            VSNPPYI +   ++ +   V+D +P ++L GG DGL  YR I  GV   L +  L + E
Sbjct: 187 FVSNPPYIPQEQEIEAM---VKDNEPHVALFGGNDGLYFYRKIFQGVEPLLQERALLAFE 243

Query: 227 IGYNQKVDVVRIFESR-KLFLVN----AFKDYGGNDRVLLFCR 264
           +G++Q+     + E+  + +  N      KD  G DR+L   R
Sbjct: 244 MGFDQR----ELMEAALQEYFPNDPHEIIKDINGKDRMLFIYR 282


>gi|228474914|ref|ZP_04059643.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis SK119]
 gi|228271146|gb|EEK12526.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis SK119]
          Length = 278

 Score = 99.0 bits (245), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY  +L ++S    PRPETE ++   L         +D   
Sbjct: 59  ALDRMLLGEPIQYIVGFQSFYGYQLQVNSHCLIPRPETEEVMLHFLEHC------KDGST 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           I D+GTG+GA+ + L K +P    +  D+    LE+A  NA       RF   + L+   
Sbjct: 113 IADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLI 172

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             +++   D ++SNPPYI+   +  +   V  ++P I+L    +G   Y  I D + + L
Sbjct: 173 KENIK--LDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVL 230

Query: 218 NKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           NK    + EIGYNQ ++   RI        VN  KD  G +R++ F
Sbjct: 231 NKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISF 276


>gi|269121055|ref|YP_003309232.1| modification methylase, HemK family [Sebaldella termitidis ATCC
           33386]
 gi|268614933|gb|ACZ09301.1| modification methylase, HemK family [Sebaldella termitidis ATCC
           33386]
          Length = 361

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 12/212 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGT 108
           +  +L   +FY     ++     PR ETE++V+ AL       E +D     ILD+G G+
Sbjct: 148 LQYLLNEEEFYGRPFYINKGVLIPRNETEIVVERALQ------ELKDTAAPNILDIGAGS 201

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVE-GLFD 166
           G + + + KE P  K +G+DIS  ALEIA  N  +    + +F  L+S+ F  V    FD
Sbjct: 202 GVISITIAKEKPDSKILGIDISDNALEIANKNKGLLKADNVKF--LKSNLFQEVNYHSFD 259

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +I+SNPPYI     + L  +VR  +P  +L    +GL  Y  I+   S +L   G    E
Sbjct: 260 MIISNPPYIPKSEYETLSDDVRMHEPEEALTAENEGLFFYYEISKNASDYLKNGGRLIFE 319

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            GYNQ   +  I +      +  FKD  G +R
Sbjct: 320 CGYNQAEIIESIMKETGYKNIEIFKDLNGINR 351


>gi|119486657|ref|ZP_01620707.1| Modification methylase HemK [Lyngbya sp. PCC 8106]
 gi|119456274|gb|EAW37406.1| Modification methylase HemK [Lyngbya sp. PCC 8106]
          Length = 304

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 25/223 (11%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--------RILDLG 105
           + GWR F    LT+S     PRPETEL+VD  +      I+++  +          +DLG
Sbjct: 88  VAGWRHF---GLTVSPAVLIPRPETELIVDLVVGL----IQRQSQICDQNLQLGHWVDLG 140

Query: 106 TGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           TG+GA+ L L   L E+       VD S +AL IA+ NA   G ++R    Q  W+  ++
Sbjct: 141 TGSGAIALGLASVLTEASIH---AVDCSREALAIAQKNAQDLGFADRIAFYQGRWWEPLD 197

Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
              G    +VSNPPYI + ++  L  EV   +P ++LDGG  GL   + +      +L+ 
Sbjct: 198 CLRGKVSGMVSNPPYIPTAMLSTLQPEVARHEPHLALDGGESGLDCIQHLVQTAPAYLHS 257

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
            G+  VE+   Q   VV + + +  +  +   +D  G +R +L
Sbjct: 258 GGVWLVEMMAGQGEQVVELLKDQGCYTQIEQIRDLAGIERFVL 300


>gi|314935934|ref|ZP_07843284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis subsp. hominis C80]
 gi|313655940|gb|EFS19682.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis subsp. hominis C80]
          Length = 278

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY  +L ++S    PRPETE ++   L         +D   
Sbjct: 59  ALDRMLLGEPIQYIVGFQSFYGYQLQVNSHCLIPRPETEEVMLHFLEHC------KDGST 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           I D+GTG+GA+ + L K +P    +  D+    LE+A  NA       RF   + L+   
Sbjct: 113 IADIGTGSGAIAIVLKKLNPTLNVIATDLIEDTLEVASDNAHQLKADIRFLKGNALKPLI 172

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             +++   D ++SNPPYI+   +  +   V  ++P I+L    +G   Y  I D + + L
Sbjct: 173 KENIK--LDGLISNPPYIDQTEMKDMEDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVL 230

Query: 218 NKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           NK    + EIGYNQ ++   RI        VN  KD  G +R++ F
Sbjct: 231 NKGAYVTFEIGYNQGEILKARIINKYPHVNVNLLKDINGLNRMISF 276


>gi|288576249|ref|ZP_05978460.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria mucosa ATCC 25996]
 gi|288565901|gb|EFC87461.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria mucosa ATCC 25996]
          Length = 301

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 89/156 (57%), Gaps = 6/156 (3%)

Query: 79  ELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ELL DS      P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A
Sbjct: 117 ELLGDSLT----PWIEHPELVHRALDLCTGSGCLAVQMAHHYPAAEIDAVDLSLDALEVA 172

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N    G+ ER + + +D F  +EG +D+IVSNPPY+++  VD L  E    +P ++L 
Sbjct: 173 AINVEDYGLEERINLIHTDLFEGLEGAYDLIVSNPPYVDAESVDMLPDEYL-HEPELALG 231

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            G DGL   R I    +++LN  G+  VEIG+N+ V
Sbjct: 232 SGEDGLDATRQILLHAAKYLNPKGVLLVEIGHNRDV 267


>gi|188587461|ref|YP_001919006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352148|gb|ACB86418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 321

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 138/281 (49%), Gaps = 22/281 (7%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++++   L  +      +++  P+  L   Q   L   +++  +      + G R+F  +
Sbjct: 37  IKEADFLLAFILDWDRSKLLAYPEKHLSSGQYKELKELVIKRSEGTPYAYLTGKREFMGL 96

Query: 64  RLTLSSDTFEPRPETELLVDSAL--------------AFSLPRIEKRDVVRILDLGTGTG 109
             T++ +   PRP+TE++V+ AL                 L   E    ++ILD+ TG+G
Sbjct: 97  EFTVTENVLIPRPDTEVVVEFALNCLGKIILKDNPNNKKELQFNELNSPIKILDICTGSG 156

Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG 163
            + L++        G  +     DIS KALEIA  NA   G+  +   ++SD FS+  + 
Sbjct: 157 NIGLSIAYYFNKMYGQNLELTLSDISDKALEIAHINASNLGLLSQCKFVKSDLFSNTSDD 216

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + +I +NPPYI S     L  EV+  +P  +L  G DGL +Y+ I+  + ++L++DG+ 
Sbjct: 217 NYRLITANPPYISSKHYSTLSKEVK-LEPAHALLAGEDGLYYYKKISQQIKKYLSQDGVL 275

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             EIG +Q+ +V  +  ++ L +V + +D  G  R++   R
Sbjct: 276 IFEIGEDQQEEVENMLSTQNL-VVTSEQDLAGRPRLIAASR 315


>gi|116515053|ref|YP_802682.1| hypothetical protein BCc_112 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256907|gb|ABJ90589.1| N5-glutamine methyltransferase, release factors activity modulator
           [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 277

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  DS   LC V  +S   +       +  +    L N + R +  E I  I+  ++F
Sbjct: 18  LTAKLDSEVLLCFVLKISKKDLFYKNKKKIKIKYLLILNNFLFRRVLGEPIAYIIKKKEF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +SS    PRPETE+LV+  L   L     ++   IL+LGTG+GA+ LAL  E+ 
Sbjct: 78  WSLSLFVSSYVLIPRPETEILVEQVL---LKVSSTKN--SILELGTGSGAISLALASENS 132

Query: 121 FFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI--E 176
             K +G DIS  AL IAK NA   N  + +F  + S+WF ++    F +IV NPPY+  +
Sbjct: 133 QLKIIGTDISLYALLIAKYNADKLNLNNVKF--IYSNWFQNIPIKKFHIIVCNPPYLSRK 190

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                C  +    F+P  +L  G  G+     I     ++    G   +E  Y Q   V 
Sbjct: 191 DFKNSCSNI---SFEPYSALVSGNSGIECIEYIIKNSFQYFVSSGWLYIEHCYKQTKLVH 247

Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259
            IF++     + + KDY   +R+
Sbjct: 248 NIFKNNFFINIVSVKDYSNRNRI 270


>gi|284046082|ref|YP_003396422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Conexibacter woesei DSM 14684]
 gi|283950303|gb|ADB53047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Conexibacter woesei DSM 14684]
          Length = 320

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 125/259 (48%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +   + + P+ VL   +      ++ R    E +  I G R F ++ L
Sbjct: 74  DAELLLADALGATRTSLHLHPERVLVADESARFAASVARRRAREPVAYIRGTRGFRHIDL 133

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+ +    PRPETELLV+  +A  LPR       R+ D+GTG+GAV LAL  E P    V
Sbjct: 134 TVDARVLVPRPETELLVE--VALGLPR-----GARVADVGTGSGAVALALKHERPDLAVV 186

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+S  AL +A++NA    ++  F   Q D  + V+G  D I+SNPPY+     + L  
Sbjct: 187 ATDLSADALAVAQANAAALRLAVAF--AQGDLLAGVDGPLDAILSNPPYVPDGDREGLEP 244

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV   +P  +L  G DGL   R +A   +    +    + E+G  Q   V  +  +  + 
Sbjct: 245 EVAVHEPSQALFAGGDGLDVLRRLA---TEAAARAPFVAFEVGAGQAPAVGALLRAAGML 301

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            + A +D  G +RV++  R
Sbjct: 302 RITAHRDLAGIERVVVGER 320


>gi|116513792|ref|YP_812698.1| methylase of polypeptide chain release factor [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116093107|gb|ABJ58260.1| Methylase of polypeptide chain release factor [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 273

 Score = 99.0 bits (245), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 19/259 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++  
Sbjct: 21  LAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAKG 80

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+ ALA     ++  D V  LDLGTG+G + +AL KE+   +G+     
Sbjct: 81  VLIPRFETEELVEWALA----HLQNGDTV--LDLGTGSGNIMVALAKEAES-RGIKDLHF 133

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F + KL
Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMF-AEKL 249

Query: 245 --FLVNAFKDYGGNDRVLL 261
             F V   +D  G  R+L 
Sbjct: 250 PDFKVEFRRDMAGKPRMLF 268


>gi|229158890|ref|ZP_04286947.1| Protein hemK [Bacillus cereus ATCC 4342]
 gi|228624501|gb|EEK81271.1| Protein hemK [Bacillus cereus ATCC 4342]
          Length = 283

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITVEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|212550575|ref|YP_002308892.1| protein methyltransferase HemK [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548813|dbj|BAG83481.1| protein methyltransferase HemK [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 303

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 104/215 (48%), Gaps = 9/215 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG  +FY ++L ++ +   PRPETE LVD  L      +       ILD+GTG+G 
Sbjct: 79  IQYILGETEFYGIQLVVNENVLIPRPETEELVD--LIIKKIALHNFSHCTILDIGTGSGC 136

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166
           + LAL K  P  K   +DIS KALE+A+ NA  N +   F   Q D FS +       F 
Sbjct: 137 IALALAKYLPDTKIYALDISGKALEVARQNAQMNEMKVIF--FQQDIFSPLTQFCPTSFS 194

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSV 225
           VIVSNPPYI       L   +  ++P  +L    +  L  Y  IAD   ++L  +GL   
Sbjct: 195 VIVSNPPYITISEKKNLLPNILHYEPHQALFVPKEFPLIFYDRIADIGKQYLTANGLLFF 254

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           E        V  + + +    V  FKD  G DR++
Sbjct: 255 ETHAFFGQTVSSMLQKKGYQNVELFKDISGKDRMV 289


>gi|298369402|ref|ZP_06980720.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283405|gb|EFI24892.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria sp. oral taxon 014 str. F0314]
          Length = 299

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 2/145 (1%)

Query: 90  LPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ E
Sbjct: 122 LPWIEHNELVHRALDLCTGSGCLAIQMAHHYPAAEIDAVDLSLDALEVAAVNIEEYGLEE 181

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           R   + +D F  ++  +D+IVSNPPY+++  V+ L  E R  +P ++L  G DGL   R 
Sbjct: 182 RIRLIHTDLFEGLDDTYDLIVSNPPYVDAESVETLPDEYR-HEPELALGSGTDGLDATRR 240

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKV 233
           I    ++HLN  G+  VEIG+N+ +
Sbjct: 241 IILHAAKHLNPRGVLLVEIGHNRDI 265


>gi|255066453|ref|ZP_05318308.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255049333|gb|EET44797.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 299

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQMAHHYPAAEIDAVDLSLDALEVAAINIEDYGLEER 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + + +D F  +EG +D+IVSNPPY+++  VD L  E    +P ++L  G DGL   R I
Sbjct: 183 INLIHTDLFEGLEGTYDLIVSNPPYVDAESVDMLPDEYL-HEPELALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +++LN  G+  VEIG+N+ V
Sbjct: 242 LLHAAKYLNPKGVLLVEIGHNRDV 265


>gi|261420782|ref|YP_003254464.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC61]
 gi|319768452|ref|YP_004133953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC52]
 gi|261377239|gb|ACX79982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC61]
 gi|317113318|gb|ADU95810.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC52]
          Length = 293

 Score = 99.0 bits (245), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 107/225 (47%), Gaps = 8/225 (3%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103
           ++ H  I  ++G+  FY     ++     PRPETE LV   L   +PR+   R  + ++D
Sbjct: 65  AVDHVPIQYLIGYESFYGRPFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           +GTG+GA+ + L  E+        DIS  AL +A+ NA   G +  F   D LQ     +
Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +    DV+VSNPPYI       L   V++++P  +L GG DGL  YR  A  +   L   
Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241

Query: 221 GLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
            L + E+G  Q   V  + ++      V    D  G DR++   R
Sbjct: 242 ALAAFEVGAGQGEAVAALLDAAFPEAEVEVDFDLNGKDRMVYMTR 286


>gi|311070219|ref|YP_003975142.1| glutamine methylase [Bacillus atrophaeus 1942]
 gi|310870736|gb|ADP34211.1| glutamine methylase [Bacillus atrophaeus 1942]
          Length = 288

 Score = 98.6 bits (244), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 117/250 (46%), Gaps = 26/250 (10%)

Query: 32  DRQRFFLT-------NAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRPE 77
           DR + F +       + + R  +H  +H+       I+G   FY     ++ D   PRPE
Sbjct: 36  DRSKLFASLQDPISEDELYRFKRHVEMHKEGVPVQYIIGKEAFYGRVFIVNDDVLIPRPE 95

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE +V   L        + + +R++D+GTG+GA+ + L  E+  F    +DIS +AL+IA
Sbjct: 96  TEEVVLHLLEKQKRVFPEGEPLRVIDVGTGSGAIAVTLALENKHFSVSAIDISKEALQIA 155

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             NA   G   + D  + D       EG   D+IVSNPPYI    +  L   VR  +P  
Sbjct: 156 AENAERLGA--KVDFFEGDLLEPFIKEGKKADIIVSNPPYISEEEMADLSNVVRFHEPLH 213

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAF 250
           +L  G DGL  Y+   + + R +N   L   EIG+ Q    K   +R F + +   V   
Sbjct: 214 ALTDGGDGLRFYKRFMEDIPRVMNDKALVVFEIGWKQGDAVKEMFLRTFPNAE---VEVL 270

Query: 251 KDYGGNDRVL 260
           KD  G DR +
Sbjct: 271 KDINGKDRTV 280


>gi|167750128|ref|ZP_02422255.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702]
 gi|167656871|gb|EDS01001.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702]
          Length = 275

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 124/268 (46%), Gaps = 19/268 (7%)

Query: 1   MQALRDSHSFLCR--VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           ++++ D   F  R  V+ +S  ++   P   + D Q     +   R    E +  ILG  
Sbjct: 14  LESVTDDAYFEARQIVSEISGGKM---PFEEITDAQLIECEDKAKRRKTGEPLQYILGNW 70

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +FY  +  +      PRPETELL D A A       K      +DL +G+G + + +  E
Sbjct: 71  EFYGRKYFVGEGVLIPRPETELLCDIAKAHL-----KNTGGTAVDLCSGSGCIAVTVALE 125

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFD-----VIVSNP 172
           +   K VG++IS KA      N   N        +  D F  ++ G F+      ++SNP
Sbjct: 126 ANV-KAVGIEISDKAYGYFLKNIEQNKAERSVTAINGDIFDKNILGRFEDDSLYAVLSNP 184

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  EV  F+P ++L GG DGL  YR +    +  L   GL +VEIG  Q 
Sbjct: 185 PYISSADMKALQKEV-TFEPELALFGGEDGLDFYRRLIPMWAGKLRSGGLFAVEIGEEQG 243

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             V RIFE    F     +DY G+DR++
Sbjct: 244 QAVSRIFEGAG-FNPEIIRDYSGHDRIV 270


>gi|312793257|ref|YP_004026180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180397|gb|ADQ40567.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 288

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 12/253 (4%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           ++ G+   +VI++    +   +   + NAI R L+   +        F      +  +  
Sbjct: 40  QILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFYVDENVL 99

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDIS 130
            PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K   F   K + VDIS
Sbjct: 100 IPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCKVLAVDIS 152

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEVR 188
            +ALE+A+ NA  NGV  +   ++S+ F ++ + L FD I+SNPPYI    +  L   V 
Sbjct: 153 ERALEVARKNAKLNGVENKISFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELDQRVL 212

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             +P I+L    DG   ++ IA+    +L   G    E+G++Q  +V RI E +    + 
Sbjct: 213 K-EPHIALFSKEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQKGYKNIK 271

Query: 249 AFKDYGGNDRVLL 261
           + KD    +R + 
Sbjct: 272 SRKDLNNIERCIF 284


>gi|229823149|ref|ZP_04449218.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271]
 gi|229787315|gb|EEP23429.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271]
          Length = 287

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 28/228 (12%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRIL 102
           R + HE +  ILG+ DF   R  ++     PR +T  ++D A ++    +EK  +  + L
Sbjct: 67  RLVTHEPLQYILGYEDFDGRRFKVTPAVLIPREDTAGILDLAASW----LEKHPNASQAL 122

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DWFSS 160
           DLGTG+G + ++L    P  +    D+S +AL IAK N           +LQ+  DW  +
Sbjct: 123 DLGTGSGILAISLALRHPQLQLTAGDLSPEALAIAKENG---------KSLQATIDWLVT 173

Query: 161 --VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              +GL     +D+++SNPPYI    +D +   V+ ++P ++L     GL+ YR +A  +
Sbjct: 174 DICQGLPQDRTYDLVISNPPYISETELDLMDESVKRYEPSMALFAEQGGLAFYRQLAKQI 233

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDR 258
             +L       +EIG+ Q   VV IF  R+ F    V+  +D  G DR
Sbjct: 234 GPYLKPIACLILEIGFRQGQAVVDIF--RQAFPQAKVSCHQDLNGRDR 279


>gi|229199454|ref|ZP_04326117.1| Protein hemK [Bacillus cereus m1293]
 gi|228584030|gb|EEK42185.1| Protein hemK [Bacillus cereus m1293]
          Length = 283

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q       I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHMYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|258544632|ref|ZP_05704866.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826]
 gi|258520140|gb|EEV88999.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826]
          Length = 276

 Score = 98.6 bits (244), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 13/257 (5%)

Query: 6   DSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           ++      +TGLS + Q I DP+  L+  Q+  L     R    E +  +LG + F  + 
Sbjct: 23  ETRHLAAHITGLSPTAQRIHDPE--LEPAQQQALDALAARLHAGEPLAYLLGHQPFCGLD 80

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PR ++E+LV+ AL      +       ++DLGTG+GA+ LA+    P  + 
Sbjct: 81  LKVSRATLIPRSDSEILVERALHH----LRDLHAPTVIDLGTGSGALALAIATARPDARI 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
              D S +AL IA+ NA  + ++     LQ+DW +       D+I+SNPPYI +   +  
Sbjct: 137 TATDQSAEALAIAQENAHAHRLTN-LTFLQADWLAPFAADCADLILSNPPYIAA---NDP 192

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESR 242
            L     +P  +L    DG     TI     R+L  +G   +E G+ Q   +  R   S 
Sbjct: 193 HLAALTHEPPSALIAAADGYRDLYTIMQQAPRNLKPNGWLLMEHGWQQGEKLRARATSSG 252

Query: 243 KLFLVNAFKDYGGNDRV 259
               +   +DY G DR+
Sbjct: 253 DWHNIATHQDYAGRDRI 269


>gi|266621434|ref|ZP_06114369.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM
           13479]
 gi|288866873|gb|EFC99171.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM
           13479]
          Length = 326

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 115/251 (45%), Gaps = 48/251 (19%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTG 109
           + +I G R+F  +  +++     PR +TE LV+  L  F     E      +LDL TG+G
Sbjct: 77  LQQITGSREFMGLEFSVNEYVLIPRQDTETLVEQVLKDFQGKNPE------VLDLCTGSG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNA---------------------------- 141
            + ++L     + +    DIS KAL +AK NA                            
Sbjct: 131 CIGISLSILGGWQEVTLADISLKALLVAKKNAEDLMTAKLHPIRLSSEGQKESPWRWRLT 190

Query: 142 --------VTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRD 189
                    T GV +    ++SD FSS+ G     FDVIVSNPPYI + +++ L  EVRD
Sbjct: 191 SELPGMEDKTAGV-QNITLVESDLFSSLSGDGKRKFDVIVSNPPYIPTNVIEELEPEVRD 249

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +PR++LDG  DGL  YR +A     +L   G    EIGY+Q   V  +        V  
Sbjct: 250 HEPRLALDGMEDGLYFYRRLAAECGSYLKPGGTVYFEIGYDQGQAVSGLLREAGFQNVLV 309

Query: 250 FKDYGGNDRVL 260
           ++D  G DRV+
Sbjct: 310 YQDAPGLDRVV 320


>gi|325282554|ref|YP_004255095.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus proteolyticus MRP]
 gi|324314363|gb|ADY25478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus proteolyticus MRP]
          Length = 284

 Score = 98.2 bits (243), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L   TGL     ++     L    R  L   + R L  E +  +LG  ++  VRL
Sbjct: 23  DAEALLEAGTGLGRTARLLRAQEALHPETRQRLDALLARRLAREPLQYLLGEVEWGGVRL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                   PRPETE L+   LA   P   +   V++ D+GTGTGA+ L      P  +  
Sbjct: 83  RCDPRALIPRPETEWLLH--LALHDPATAR--AVQVADIGTGTGALALGWKAARPQTRVT 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D+S  AL +A+ NA  NG+   F   Q D  + + G  F +I+SNPPY+       L 
Sbjct: 139 ATDLSADALALARENAALNGLDVSF--YQGDLLAPLTGQTFGLILSNPPYLPDQDRGTLA 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            EV D DP ++L GG DGL+  R +A      L   G+  +E+
Sbjct: 197 PEV-DHDPALALYGGPDGLTLARRLAAQAPARLAAGGVLWLEL 238


>gi|319648108|ref|ZP_08002325.1| YwkE protein [Bacillus sp. BT1B_CT2]
 gi|317389743|gb|EFV70553.1| YwkE protein [Bacillus sp. BT1B_CT2]
          Length = 288

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 12/223 (5%)

Query: 46  LKHESI--HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           L H+ +    I G   FY  + +++     PRPETE +V++ L+ +       D ++ +D
Sbjct: 62  LHHQGVPVQYITGKESFYGRKFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+GA+ + L  ESP F     DIS +AL  A+ NA  + +  + D L  D    +  
Sbjct: 122 VGTGSGAIAVTLALESPRFSVTATDISEQALSTARHNA--DRLGAKVDFLCGDLLEPLIA 179

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +   DVIVSNPPYI    +  L   VR  +P  +L  G DGL  Y+     +   +   
Sbjct: 180 RQKKADVIVSNPPYISEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQ 239

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260
            L   EIG+ Q   V  +F   + F    V   KD  G DR++
Sbjct: 240 ALVVFEIGWTQGNAVKDMF--HRFFPDADVRVKKDLNGKDRIV 280


>gi|308800168|ref|XP_003074865.1| HemK protein methyltransferase (IC) [Ostreococcus tauri]
 gi|116061414|emb|CAL52132.1| HemK protein methyltransferase (IC) [Ostreococcus tauri]
          Length = 394

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 110/222 (49%), Gaps = 29/222 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRI---------LDLGT 106
           WRD     LT+S     PRPETELL+D A    L R+E + D             LDLGT
Sbjct: 168 WRDL---ELTVSDAVLIPRPETELLIDFAEEI-LNRLELQLDGTSTWNHLLSSPWLDLGT 223

Query: 107 GTGAVCLALLKE--------SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           G+GA+ +A+ +          P    +  D S +A+E+AK NA T GV +    L   WF
Sbjct: 224 GSGALAIAMAQALQSRGRETVPLV--LATDKSIEAVEVAKHNATTCGVQDVIQVLNGSWF 281

Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSR 215
             ++    F  I+SNPPYI + ++  L  EV   +PR++LDGG+  GL H  +I   ++ 
Sbjct: 282 EPIDDSIRFAGILSNPPYIPTELLGSLQPEVYLHEPRLALDGGVSGGLLHITSICAKITD 341

Query: 216 HLNKDGLCSVEI-GYNQKVDVVRIFESRKLF-LVNAFKDYGG 255
            L   GL ++E  G  Q   V R+ E  + F  +    DY G
Sbjct: 342 FLLPGGLFAIETHGAEQAKFVGRLLEQTRAFDDIRTRADYAG 383


>gi|300867729|ref|ZP_07112374.1| HemK family modification methylase [Oscillatoria sp. PCC 6506]
 gi|300334312|emb|CBN57546.1| HemK family modification methylase [Oscillatoria sp. PCC 6506]
          Length = 311

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 17/222 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDV-VRILDLGTGTGAVCL 113
           WR F    L ++     PRPETEL++D A+  +  R  IE  +     +DLGTG+GA+ L
Sbjct: 92  WRHF---SLKVTPAVLIPRPETELIIDLAVEAAKHRSQIESLNAKSHWVDLGTGSGAIAL 148

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----------G 163
            L +         VD S  A+ +A+ NA   G+S+R    Q  W+  +E          G
Sbjct: 149 GLAESLTNTLIHAVDYSSDAIAVARQNADNLGLSDRIQFYQGSWWEPLESAIIDGLPLRG 208

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               +V+NPPYI S +V  L  EV   +P ++LDGG DGL   R +      +L   G+ 
Sbjct: 209 QISGMVANPPYIPSSLVPNLQPEVAKHEPHLALDGGSDGLDCIRHLVATAPDYLRSGGVW 268

Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            VE+   Q   VV I  S   +  +  + D  G  R  +  R
Sbjct: 269 LVEMMEGQAEVVVEILHSAGSYRDIGIYADLAGIKRFAIAFR 310


>gi|289435804|ref|YP_003465676.1| modification methylase, HemK family [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289172048|emb|CBH28594.1| modification methylase, HemK family [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 283

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  +  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAIALKKAFPKVLVTASDISSPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK NA+      RF   D L+S  F      FD++++NPPYI       +   V   +P
Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAAMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S     V   K
Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSTVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|167041536|gb|ABZ06285.1| putative RNA methylase family UPF0020 [uncultured marine
           microorganism HF4000_008B14]
          Length = 289

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 12/251 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L SHQ     +  ++ +Q   L   + R LK E +  IL +++FY V L ++SD   PRP
Sbjct: 42  LFSHQ-----EDGVNAQQERELAQIVERRLKREPLAYILAYKEFYGVNLLVNSDVLIPRP 96

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE +V+ AL  +L  +E  ++V I D+GTGTGA+ + L    P  +   +D +   L++
Sbjct: 97  ETETMVEHALFMALMGMETTELV-IADVGTGTGAIAINLAIHLPAARIYAIDAADAVLDV 155

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N   + V++R    + D    +    D+IV+N PYI +  +  L  E++ ++P  +L
Sbjct: 156 ASHNIRAHNVADRIKLAKGDLLEPLPEPVDLIVANLPYIPTSRIPTLQPEIQ-WEPIAAL 214

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDY 253
           DGG DGL   R +       L ++G+  +E+   Q   V  +  SR+LF     +  +D 
Sbjct: 215 DGGGDGLDLIRRLMSQAPDKLKENGIILLELDPEQVSAVEEL--SRQLFPEATTSIEQDL 272

Query: 254 GGNDRVLLFCR 264
              DRV +  R
Sbjct: 273 AHLDRVFVINR 283


>gi|332881259|ref|ZP_08448909.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680635|gb|EGJ53582.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 271

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+   + +  D      +R  L N + R  + E +  +LG  DF     +++     PR
Sbjct: 21  GLTPIDICMGRDRTFSLEERRELENIVKRLSQKEPVQYVLGQTDFCGRTFSVAPGVLVPR 80

Query: 76  PETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           PETE L +       A  FS P I        LD+GTG+G + + L +E P  +   +DI
Sbjct: 81  PETEELTEWIIQDEKASGFSSPDI--------LDIGTGSGCIAITLSQELPQAQVSAIDI 132

Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S +AL IA+ NA   G +  F   D L S        L+D+IVSNPPY+     + +   
Sbjct: 133 STQALAIARKNAERLGAAVDFRCQDILDSPSKDQDSPLWDIIVSNPPYVCEHEREDMEEN 192

Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V  ++P  +L     D L  YR I +   + L + G   VEI      +  R+F+S  L 
Sbjct: 193 VLRYEPSQALFVPDHDPLLFYRAIGEYAVKTLKEGGRLYVEINRAYGWETTRLFQSLGLR 252

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            V   KD+  N+R ++ CR
Sbjct: 253 DVTLKKDFYDNER-MIRCR 270


>gi|78777517|ref|YP_393832.1| modification methylase HemK [Sulfurimonas denitrificans DSM 1251]
 gi|78498057|gb|ABB44597.1| Modification methylase HemK [Sulfurimonas denitrificans DSM 1251]
          Length = 276

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 108/217 (49%), Gaps = 12/217 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRIL 102
           R  K+E +  I+G   FY+    + S    PRPETELL+D  L      IE K   + I+
Sbjct: 64  RRAKNEPLEYIVGSVSFYSEEFYIDSGALIPRPETELLIDEVLK----NIEDKNSPLNIV 119

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++G G+G + + L K  P  K + VDIS  AL +A+ N     + +R +         ++
Sbjct: 120 EVGVGSGIISIILAKSLPNAKFIAVDISQAALGVARKNIEKFSLEDRIELRHGSLLEPIK 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              D +VSNPPY    I D + LE    ++P+ +L GG  G    + + DGV +   +  
Sbjct: 180 EKIDYLVSNPPY----IADDVSLESNLSYEPQNALFGGSVGDEIIKELLDGVLKA--EIN 233

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           L S E+GY+QK  +     ++ L  +  +KDY   DR
Sbjct: 234 LFSCEMGYDQKDKIQNYLNNKPLKSLVFYKDYSDFDR 270


>gi|328555407|gb|AEB25899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus amyloliquefaciens TA208]
 gi|328913778|gb|AEB65374.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           LL3]
          Length = 286

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 23/253 (9%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76
           +D   +L + Q     + + R  +H  +H+       I+G   FY     ++ D   PRP
Sbjct: 35  MDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKEQFYGREFFVNDDVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ETE +V     F L   +KR     + + ++D+GTG+GA+ + L  E   F     DIS 
Sbjct: 95  ETEEVV-----FHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALECGHFSVAASDISK 149

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL++A+ NA   G   RF  LQ D    F S     D+IVSNPPYI    +  L   VR
Sbjct: 150 EALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVR 207

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLV 247
             +P  +L  G DGL  Y+   + +   +    L   EIGYNQ   V  +F  S     V
Sbjct: 208 FHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAVEDLFRHSFPNAEV 267

Query: 248 NAFKDYGGNDRVL 260
              KD  G DR +
Sbjct: 268 EVVKDINGKDRTV 280


>gi|118445015|ref|YP_879015.1| methyltransferase [Clostridium novyi NT]
 gi|118135471|gb|ABK62515.1| Methyltransferase [Clostridium novyi NT]
          Length = 284

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 9/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           + D+   L +V       +I++ + +L  D +  FL    +R  K   +  ILG  +F  
Sbjct: 23  MLDAQLLLQKVLKKDKLFIILNRNEILSKDEEEEFLKLINLRKDKM-PVKYILGECEFMG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LV+  +      I++ +  RI D+  G+GA+ +++ K     
Sbjct: 82  LNFYVKEGVLIPRADTEILVEEVIK----EIKENNYNRICDVCCGSGAIGVSIGKYMENS 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
                DIS  A+E+   N     + +R    +SD  +        FDVIVSNPPYI+  +
Sbjct: 138 TVDCYDISDIAIEVTGKNIERFLLKDRLTVEKSDLLTVAIKQNKKFDVIVSNPPYIKEEV 197

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +V+D++P I+L GGIDGL  YR I       L  +GL + EIGY+Q   V  + 
Sbjct: 198 IPTLMEDVKDYEPYIALCGGIDGLDFYRKITVQSLEILENNGLLAFEIGYDQAEAVKELL 257

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  V    D  G +RV++
Sbjct: 258 MESGFTDVKVINDLEGLNRVVI 279


>gi|326335033|ref|ZP_08201233.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692838|gb|EGD34777.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 281

 Score = 98.2 bits (243), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 9/218 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K+  I  I     FY +   ++ +   PR ETE LV+    + L    K   ++ILD+GT
Sbjct: 66  KNVPIQYIFHRTYFYGMSFFVNDNVLIPRQETEELVE----WILRETPKNTPLQILDIGT 121

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGL 164
           G+G + +AL K  P      +DIS KALE+A+ NA  N VS  F  LQ D    + +  +
Sbjct: 122 GSGVIAIALKKYLPEATVFALDISEKALEVAQRNAKENKVSVHF--LQEDILKVTHLGRI 179

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLC 223
           FD+IVSNPPY+ +     + L V + +P ++L    D  L  Y  IA+   +HL+K G  
Sbjct: 180 FDIIVSNPPYVRNSEKREIALNVLEHEPHLALFVPDDNPLLFYEKIAELAHQHLSKQGKL 239

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             E+      +++++   +    V   KD   +DR++L
Sbjct: 240 FFEMNQYLAKEMIQMLNRKGFRKVVLQKDLSNHDRMIL 277


>gi|124023898|ref|YP_001018205.1| protein methyltransferase [Prochlorococcus marinus str. MIT 9303]
 gi|123964184|gb|ABM78940.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9303]
          Length = 306

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 21  QVIVDPD-SVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           Q+ +DP  SVL +R    L     + L H   +  ++G   + +V L +S+    PR ET
Sbjct: 45  QLYLDPRRSVLLERSLDQLAMIWKQHLDHHIPLQHLIGCCPWRDVELEVSAAALIPRQET 104

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLVD    F+L    ++      DLGTG+GA+ +AL +  P ++G  VD S +AL +AK
Sbjct: 105 ELLVD----FALQAFARKPFGCWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK 160

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            N         +   Q  W+  +    G F +++ NPPYI   ++  L   VRD +P ++
Sbjct: 161 RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEAVMAQLEPVVRDHEPHLA 220

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG DGL   R I  G  + L   G   +E  ++Q   V+ +   + L  V    D  G
Sbjct: 221 LCGGADGLVATRQIIVGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVEYKSDLLG 280

Query: 256 NDR 258
             R
Sbjct: 281 VRR 283


>gi|320008548|gb|ADW03398.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces flavogriseus ATCC 33331]
          Length = 281

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 13/241 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PD+  D   R++ T  I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHNVPDADFD--ARYWET--IARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LA+ +E P  +
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALAMAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              V++S  AL   + NA  + V+  R D L +     ++G  D+++SNPPYI     + 
Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHRGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD DP+++L  G DGL   R I     R L   GL  +E    Q   V  IF   
Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 243 K 243
           +
Sbjct: 256 R 256


>gi|239944288|ref|ZP_04696225.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239990743|ref|ZP_04711407.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291447756|ref|ZP_06587146.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|291350703|gb|EFE77607.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
          Length = 281

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 13/241 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PDS  D   R++ T  + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHTVPDSDFD--ARYWET--VARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   ++DL TG+GA+ LA+ +E P  K
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPVVVDLCTGSGAIALAMAQEVPRSK 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              V++S  AL   + NA  + V+  + D L +     ++G  D+++SNPPYI     + 
Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHKGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF   
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 243 K 243
           +
Sbjct: 256 R 256


>gi|182435968|ref|YP_001823687.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776592|ref|ZP_08235857.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464484|dbj|BAG19004.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656925|gb|EGE41771.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces cf. griseus XylebKG-1]
          Length = 281

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 113/241 (46%), Gaps = 13/241 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PD+  D   R++ T  I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHTVPDTDFD--ARYWET--IARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   ++DL TG+GA+ LA+ +E P  +
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPVVVDLCTGSGAIALAMAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              V++S  AL   + NA  + V+  R D L +     ++G  D+++SNPPYI     + 
Sbjct: 138 VHAVELSEDALRWTRKNAEGSRVTVHRGDALSA--LPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF   
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 243 K 243
           +
Sbjct: 256 R 256


>gi|317487896|ref|ZP_07946488.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA]
 gi|316913022|gb|EFV34539.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA]
          Length = 331

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 55/309 (17%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 16  AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 75

Query: 67  LSSDTFEPRPETELLVDSALAF-------------------------------------- 88
           +      PRPETE+LV  ALA                                       
Sbjct: 76  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 135

Query: 89  -------SLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                  S P +   + V       + DL TG+G +  ++  E P  + +  DI+ +A+ 
Sbjct: 136 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 195

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F+
Sbjct: 196 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 255

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V    
Sbjct: 256 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 315

Query: 252 DYGGNDRVL 260
           D  G  RVL
Sbjct: 316 DLAGRPRVL 324


>gi|188996114|ref|YP_001930365.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931181|gb|ACD65811.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 291

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 23/267 (8%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES---IHRILGWRDFYNVRLT 66
            + ++  L  H +I  PD  + +         +V S K  S   +  +   ++F+ +   
Sbjct: 29  LISKILNLPKHHIISYPDLEISEEDA---KKLVVLSEKRASGYPMAYLTKNKEFFGLDFY 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----LDLGTGTGAVCLALLKESPFF 122
           +      PRPETE+LV+         IEK    +     L++G G+G + ++LLK     
Sbjct: 86  IEEGVLIPRPETEILVEKV-------IEKLQNAKGELIGLEVGVGSGCISVSLLKNIKNL 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           K +G+DIS KALEI + +A  + V +R     F+ +     S      D +VSNPPYI+ 
Sbjct: 139 KIIGIDISEKALEITEKSAKIHEVLDRLKLFKFNIMNGKMNSLNLPKLDFVVSNPPYIKE 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L  EV+  +P+ +L  G +G   Y  I + +   L +DG  + E+G  Q   V  
Sbjct: 199 EDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKVKL 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I E      +  +KD  G DRV++  +
Sbjct: 258 ILEDNGYKNIEIYKDLAGIDRVIIASK 284


>gi|229187554|ref|ZP_04314694.1| Protein hemK [Bacillus cereus BGSC 6E1]
 gi|228595921|gb|EEK53601.1| Protein hemK [Bacillus cereus BGSC 6E1]
          Length = 283

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RIE+    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIERHFGDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++E+AK NA T G    F    L   ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIEVAKENAKTLGAEVTFYHGDLLLPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|256839099|ref|ZP_05544609.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parabacteroides sp. D13]
 gi|256740018|gb|EEU53342.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parabacteroides sp. D13]
          Length = 318

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 126/290 (43%), Gaps = 48/290 (16%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71
           RV GLS+HQ+++     L D ++F +   IV  L+ ++ I  +LG  DFY +   ++ D 
Sbjct: 31  RVCGLSTHQLLLGKGKELSDTEKFKIKE-IVEGLRLYKPIQYLLGIADFYGMEFKVTPDV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +        +    RILD+GTG+G + ++L K  P  +   VDIS 
Sbjct: 90  LIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPKAEVAAVDISP 144

Query: 132 KALEIAKSNAVTNGVS---------------------------ERFDTLQSDWFSSVE-- 162
           +AL +A+ NA  N VS                            RF   ++  F+ V+  
Sbjct: 145 EALAMAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTRNKIFTYVKLK 204

Query: 163 -----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
                      G  + IVSNPPYI       +   V + +P ++L     D L  YR IA
Sbjct: 205 SHTEETEASLIGNLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDDDPLLFYRAIA 264

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 265 RFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|184154904|ref|YP_001843244.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
 gi|183226248|dbj|BAG26764.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
          Length = 283

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI R    E    ++G   F+  +  ++ D   P  ETE LV+  L  S+P  ++   ++
Sbjct: 62  AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG+G + + L  E P ++    DIS  AL+IA +N   +G +   + ++SD F+ 
Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + +  F++IV+NPPY+    +D +  EV +++P ++L    +GL+ YR +      HL  
Sbjct: 176 LGDQRFNLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235

Query: 220 DGLCSVEIGYNQKVDVVRIFE 240
            G+   E G+ Q+  + R+ +
Sbjct: 236 RGVLFGETGHRQEERIQRLLK 256


>gi|295698658|ref|YP_003603313.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Candidatus Riesia pediculicola USDA]
 gi|291157335|gb|ADD79780.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Candidatus Riesia pediculicola USDA]
          Length = 190

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 96/191 (50%), Gaps = 13/191 (6%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISC 131
           PRPETE LV+ AL  +     K+  ++ILDLG G G + LAL KE  S F   VG DI  
Sbjct: 3   PRPETEHLVELALKLA----NKKKGLKILDLGAGAGPISLALAKELQSSFI--VGTDIDE 56

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
             + IA++NA +N        L+S+W   F   +  FD+IVSNPPYI S    CL     
Sbjct: 57  SVISIARANA-SNLSIRNVKFLKSNWFDCFHKKKKKFDLIVSNPPYI-SKDDPCLKFGDL 114

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            ++PR +L    +GL   R I     + L K+G   +E G NQ   V   F       + 
Sbjct: 115 RYEPRRALISSNNGLFDIRIIVKDSKKFLKKNGWLLIEHGCNQGKKVREFFIKSSYQKIK 174

Query: 249 AFKDYGGNDRV 259
             +DY G +RV
Sbjct: 175 TIQDYSGKERV 185


>gi|160871959|ref|ZP_02062091.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rickettsiella grylli]
 gi|159120758|gb|EDP46096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rickettsiella grylli]
          Length = 280

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 13/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A  D+      V  L+  Q+   P D ++   Q   + + I R  K E I  +LG ++F+
Sbjct: 21  AYLDTELLFSEVLKLTRAQLHSQPLDRLITITQEKRIKHVIARRQKGEPIAYLLGRQEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA-FSL-PRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  L ++ D   PRPETELLV+  L  FS  PR       +I+DLGTG+ A+ +AL  E 
Sbjct: 81  SFMLEVTPDVLIPRPETELLVEVLLENFSTEPR-------KIVDLGTGSAAISVALAWER 133

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIES 177
           P ++ +  D S  AL++AK N ++    +  +  +  W  +  V   FD I+SNPPY+  
Sbjct: 134 PTWQLLATDCSMAALQVAKRN-ISRYHLQTIELRKGYWCEALNVGEKFDGILSNPPYLAR 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                       ++P+ +L  G  GL     I      +L+  G+  +E G  Q   V  
Sbjct: 193 NDPHLQSEPGLAYEPKNALISGEKGLDDLERIIIQSREYLHPGGILFLEHGAQQATLVEE 252

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
            F +     +  +KD  G+ RV
Sbjct: 253 FFLNYGYHEIKNYKDLAGHQRV 274


>gi|291542172|emb|CBL15282.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus bromii L2-63]
          Length = 280

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 18/227 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I + +  E +  ILG   F      +      PR +TE++V+  + F   R +K+ V   
Sbjct: 61  IEKRISGEPLQYILGEWSFMGFDFKVGRGVLIPRDDTEVVVNLCIDFLENRTDKKTV--- 117

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DL +G+GA+ +AL K S   +   V+I   A    ++N   N  S +   + +D     
Sbjct: 118 -DLCSGSGAIAVALDKISGA-EVTAVEIDETAFSYLETNVKENNSSVK--PVMADALEIC 173

Query: 162 E----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           E    G FD+IVSNPPYI+S  ++ L  EVR  +PR++LDGG DG   YR I    SR L
Sbjct: 174 ETFADGEFDLIVSNPPYIKSADIETLQKEVR-LEPRLALDGGEDGCDFYREIVSRWSRKL 232

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK---DYGGNDRVLL 261
            K G  + E+G NQ  D V+   + K F  + FK   D+GG  R ++
Sbjct: 233 KKGGALAFELGENQ-ADAVKALMTDKGF--SDFKISLDFGGVQRAII 276


>gi|227514468|ref|ZP_03944517.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260663283|ref|ZP_05864174.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum 28-3-CHN]
 gi|227087154|gb|EEI22466.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260552135|gb|EEX25187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum 28-3-CHN]
          Length = 283

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 7/201 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI R    E    ++G   F+  +  ++ D   P  ETE LV+  L  S+P  ++   ++
Sbjct: 62  AITRVASSEPAQYVVGKAPFFGRKFVVNRDVLIPETETEELVEWVLD-SMPADKE---LK 117

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG+G + + L  E P ++    DIS  AL+IA +N   +G +   + ++SD F+ 
Sbjct: 118 VLDLGTGSGVIGITLALERPKWQVTLSDISAAALKIALTNQRLHGTN--LNQVESDLFAR 175

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + +  FD+IV+NPPY+    +D +  EV +++P ++L    +GL+ YR +      HL  
Sbjct: 176 LGDQRFDLIVTNPPYVALSEIDEMDPEVLEYEPPLALFASENGLAFYRRLFAAAGEHLTP 235

Query: 220 DGLCSVEIGYNQKVDVVRIFE 240
            G+   E G+ Q+  + ++ +
Sbjct: 236 RGVLFGETGHRQEERIQQLLK 256


>gi|318042638|ref|ZP_07974594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Synechococcus sp. CB0101]
          Length = 300

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 106/205 (51%), Gaps = 9/205 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           WRD     L +      PR ETELLV+ A   L+ S         +   DLGTG+G + +
Sbjct: 85  WRDL---ELEVQPGALIPRQETELLVELAEQRLSSSGDAPSGASPLHWADLGTGSGCLAV 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVS 170
           AL +  P  +GV VD S +AL +A+ N   + + ER +  Q +W++ +    G  D+++S
Sbjct: 142 ALGRCWPGSRGVAVDQSSEALALAQRNLSKHHLLERVELRQGNWWAPLADWAGQLDLVIS 201

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI + +   L   VRD +P ++LDGG DGL   R IA G + HL   G   +E  ++
Sbjct: 202 NPPYIPTAVWKQLEPTVRDHEPALALDGGGDGLEAIRAIAAGAAAHLAPGGWLLLEHHHD 261

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGG 255
           Q   V+ +     L  V+  +D  G
Sbjct: 262 QSEAVLALLNGAGLEQVSPHRDLEG 286


>gi|291567205|dbj|BAI89477.1| N(5)-glutamine methyltransferase [Arthrospira platensis NIES-39]
          Length = 310

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 13/215 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTG 107
           ++ WR+F    L +S     PRPETEL++D A+++     E  + +        +DLGTG
Sbjct: 91  VVHWRNF---ALKVSPAVLIPRPETELIIDIAVSYHAASSEAINSICQPGSGNWVDLGTG 147

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164
           +GA+ L L    P      VD S  AL IA  NA + G   R    Q  W++   S++G 
Sbjct: 148 SGAIALGLASVFPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGK 207

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
              +V+NPPYI S  +  L  EV   +P  +LDGG  GL     +     + L   G+  
Sbjct: 208 VSGMVANPPYIPSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWI 267

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           VE+   Q   V  + ES   +  +    D  G DR
Sbjct: 268 VEMMAGQGQAVTSMLESAGCYRDIKILPDLAGIDR 302


>gi|289432896|ref|YP_003462769.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalococcoides sp. GT]
 gi|288946616|gb|ADC74313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalococcoides sp. GT]
          Length = 277

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 10/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       +   L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETAYFETLQHRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+     +
Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAE 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240
            L     + +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + + I +
Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPFLPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     +    DY G  R++
Sbjct: 252 TLPQASLEIISDYAGIPRIV 271


>gi|94984176|ref|YP_603540.1| HemK family modification methylase [Deinococcus geothermalis DSM
           11300]
 gi|94554457|gb|ABF44371.1| modification methylase, HemK family [Deinococcus geothermalis DSM
           11300]
          Length = 283

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/173 (36%), Positives = 90/173 (52%), Gaps = 7/173 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L N + R    E +  +LG  ++  VRL        PRPETE L    L  +L  ++   
Sbjct: 61  LVNLLRRRAAREPLQHLLGEVEWGGVRLRTDRRALVPRPETEWL----LHLALETLQGVS 116

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTGTGA+ L +    P       D+S  AL +A+ NAV NG+   F  L    
Sbjct: 117 APRVLDVGTGTGALALGIKAARPDASVTATDLSPDALTLARENAVLNGLDVVF--LAGRL 174

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            + + G FD+IVSNPPY+ +   + +  EVR FDP ++L  G +GL   R +A
Sbjct: 175 LAGLSGPFDLIVSNPPYLPAADREQVDPEVR-FDPDLALYAGPEGLDVARPLA 226


>gi|325674111|ref|ZP_08153801.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|325555376|gb|EGD25048.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 268

 Score = 97.8 bits (242), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 14/212 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   I R      +  +LGW +F   R+ +    F PR  TELLV  A A     +++ D
Sbjct: 45  LARMIERRSAGVPLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAAL----VDQGD 100

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153
           VV  +DL  G+GAV +A+  +SP  +    D+   A+  A+ N    G      + FD L
Sbjct: 101 VV--VDLCCGSGAVGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHEGDLFDAL 158

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +    + G  DV+V+N PY+ S  +  +  E RD +PR +LDGG DGL   R +A+  
Sbjct: 159 PEE----LRGRVDVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVAEAA 214

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            R L+  G   VE   +Q    V IF    L 
Sbjct: 215 PRWLSPGGRLLVETSIHQASSSVGIFTRAGLL 246


>gi|331001218|ref|ZP_08324844.1| protein-(glutamine-N5) methyltransferase [Parasutterella
           excrementihominis YIT 11859]
 gi|329568945|gb|EGG50741.1| protein-(glutamine-N5) methyltransferase [Parasutterella
           excrementihominis YIT 11859]
          Length = 247

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 114/257 (44%), Gaps = 13/257 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G+     ++  D VL   +   L +   +  +   +  +LG ++F+     ++ 
Sbjct: 1   MLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPFLVNP 60

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR +TE LV+  L   LP+        + DLGTG+G +   +  E P       D+
Sbjct: 61  SVLIPRSDTECLVE-WLIEHLPK-----NALVCDLGTGSGCIAATVALERPDLTVWASDL 114

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL +A++N    G   +   +Q  W      E  FD ++SNPPYIE    D   L+ 
Sbjct: 115 SESALAVAQANCKALGADVKL--VQGSWLDPYPAELSFDAVISNPPYIER---DDKHLDA 169

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             ++PR +L    DGL  YRTI   + R   K  L +VE G+NQ   V  IFE       
Sbjct: 170 LRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENGFKGS 229

Query: 248 NAFKDYGGNDRVLLFCR 264
             F DYG N R   + +
Sbjct: 230 ATFWDYGNNPRFTTWIK 246


>gi|325830609|ref|ZP_08164030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eggerthella sp. HGA1]
 gi|325487355|gb|EGC89797.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eggerthella sp. HGA1]
          Length = 345

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 126/309 (40%), Gaps = 55/309 (17%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 30  AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89

Query: 67  LSSDTFEPRPETELLVDSALAF-------------------------------------- 88
           +      PRPETE+LV  ALA                                       
Sbjct: 90  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 149

Query: 89  -------SLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                  S P +   + V       + DL TG+G +  ++  E P  + +  DI+ +A+ 
Sbjct: 150 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 209

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F+
Sbjct: 210 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V    
Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 329

Query: 252 DYGGNDRVL 260
           D  G  RVL
Sbjct: 330 DLAGRPRVL 338


>gi|218283970|ref|ZP_03489831.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989]
 gi|218215487|gb|EEC89025.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989]
          Length = 282

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 8/216 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG+  FY     ++ D   PRPETE LV   L+        +D V + D+ TG+
Sbjct: 67  EPLGYVLGYECFYGYDFIVNEDVLIPRPETEELVGLVLSKFDDYFADKDHVNVFDVATGS 126

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDV 167
           GA+ + L  E P    +  DIS +AL +A+ N    G +  F      D F   +   D+
Sbjct: 127 GAIGITLNLEEPKMDVIASDISKEALVVAQKNNEKLGANVNFICGSMLDPFVDRDLHCDI 186

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +V NPPYI S   + +   V D++P ++L GG DGL  YR + +     LN+    + E+
Sbjct: 187 LVCNPPYIPS--EEKMEQSVVDYEPHVALFGGNDGLKFYRDVFEKAHLVLNEKAFLAFEM 244

Query: 228 GYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVL 260
           G++Q   +  +  +R+ F    +   KD  G DR+L
Sbjct: 245 GWDQGEALSNL--AREYFESATITVHKDMSGKDRML 278


>gi|89095601|ref|ZP_01168495.1| modification methylase, HemK family protein [Bacillus sp. NRRL
           B-14911]
 gi|89089347|gb|EAR68454.1| modification methylase, HemK family protein [Bacillus sp. NRRL
           B-14911]
          Length = 292

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 118/268 (44%), Gaps = 13/268 (4%)

Query: 3   ALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A RDS++    L     +S  +++ +    LD R +     A+        +  I+G  +
Sbjct: 22  AGRDSNAGEILLGHFLNMSRSRLLAEMREELDTRMQGAFKEAVQLHADGRPVQYIIGKEE 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     ++ +   PRPETE LV  AL        +       D+GTG+GA+ + L  ES
Sbjct: 82  FYGRTFLVNENVLIPRPETEELVLEALKRKEKLFGREAASAAADIGTGSGAIAVTLKLES 141

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIE 176
           P  +    D+   +L+ AK NA  NG    F   D LQ   F      FD+I+SNPPYI 
Sbjct: 142 PDLQVTATDVYGPSLDTAKENADKNGAEIEFILGDLLQP--FIEESRKFDIIISNPPYIP 199

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              ++ +   V + +P  +L  G DGL  YR   + +   L +  L   E+G  Q   V 
Sbjct: 200 LSDMEGMSEVVTENEPHRALFAGQDGLDLYRRFMEELPLVLKEKSLVGFEVGAGQSKAVS 259

Query: 237 RIFESRKLFL---VNAFKDYGGNDRVLL 261
            +   R  F    ++   D  G DR++ 
Sbjct: 260 ELL--RTAFPDANIDIVYDINGKDRMVF 285


>gi|315304794|ref|ZP_07874956.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria ivanovii FSL F6-596]
 gi|313626834|gb|EFR95805.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria ivanovii FSL F6-596]
          Length = 236

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  IL    FY     ++ D   PRPETE LV  A AF    + K  +  +LD
Sbjct: 15  RYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVACAEAF----LNKNPLPAVLD 70

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVE 162
           + TG+G + +AL K  P       DIS  AL IAK NA+      RF +T   + F    
Sbjct: 71  VCTGSGIIAIALKKAFPNIAMTAADISGPALAIAKKNALLLNADVRFVETDLLEAFKQHG 130

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD+I++NPPYI     + +   V   +P ++L    DG + Y      +   LN    
Sbjct: 131 EHFDMILANPPYISEAEKETMSDYVLKNEPALALFAENDGFAIYERFVADLKFVLNPSFW 190

Query: 223 CSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258
             VEIGY Q   V ++F+ S     V   KD    DR
Sbjct: 191 VGVEIGYTQGEKVKQLFQKSYPHSAVVIHKDINSKDR 227


>gi|86738954|ref|YP_479354.1| HemK family modification methylase [Frankia sp. CcI3]
 gi|86565816|gb|ABD09625.1| modification methylase, HemK family [Frankia sp. CcI3]
          Length = 336

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 5/200 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +    +  +LGW +F+ +R+ +    F PR  TE LVD A+     R+  R 
Sbjct: 94  LAAMVRRRVAGLPLEHVLGWAEFHGLRIAVDPGVFVPRRRTEFLVDQAVE----RVAGRS 149

Query: 98  -VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             V ++DL  G+GA+ +AL+   P  +    DI   A+  A+ N  + G       L   
Sbjct: 150 RPVTVVDLCCGSGAMGVALVAALPGIEVHAADIEPAAVRCARRNLASAGGQVYDGDLYEP 209

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G  D++ +N PY+ +  ++ +  E R+ +PR++LDGG DGL   R +A    R 
Sbjct: 210 LPAVLRGHVDLLAANAPYVPTDAIELMPPEAREHEPRVALDGGADGLDVLRRVAAEAPRW 269

Query: 217 LNKDGLCSVEIGYNQKVDVV 236
           L   G   VE G  Q   +V
Sbjct: 270 LAPGGHLLVETGERQAASIV 289


>gi|259503693|ref|ZP_05746595.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM
           16041]
 gi|259168325|gb|EEW52820.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM
           16041]
          Length = 290

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 7/200 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +   A+ + L H     I+G   FY  +  ++     P  ET  LV+  LA +LP   + 
Sbjct: 60  WFQRAVAQLLNHVPAQYIVGQTSFYGRQFKVTPAVLVPEAETAELVEWVLA-ALPADRE- 117

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +R+LDLGTG+G + + L  E P +     DIS  AL +A+ NA  + ++     ++SD
Sbjct: 118 --LRVLDLGTGSGVIGITLALERPCWSVTLSDISPAALAVARENAQRHQLA--LPLVESD 173

Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            F+++ +  +DVIV+NPPYI+      +   V + +PR++L     GL  Y  + +   R
Sbjct: 174 LFANLADQRYDVIVTNPPYIDPAATALMDQAVLENEPRVALFADEHGLGFYHRLFEQAGR 233

Query: 216 HLNKDGLCSVEIGYNQKVDV 235
           HL   G    E GY+Q+  +
Sbjct: 234 HLRPSGQLFGETGYDQEQSI 253


>gi|315159265|gb|EFU03282.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0312]
          Length = 277

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S KAL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQECYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   + ++  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|332827555|gb|EGK00301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dysgonomonas gadei ATCC BAA-286]
          Length = 279

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 122/252 (48%), Gaps = 15/252 (5%)

Query: 14  VTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDT 71
           +T +   QV +DP  S  +   R    + I++ LK +E I  I+G  +F+ +  +++ + 
Sbjct: 32  ITKMPYPQVFIDPPVSTPELHNRI---DVILKRLKQYEPIQYIIGETEFFGLPFSVNENV 88

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LV+  L     +  K+  + +LD+GTG+GA+ +AL K          DIS 
Sbjct: 89  LIPRPETEELVELIL-----KENKKSELSLLDIGTGSGAIAVALAKNMARTSVSAWDISY 143

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           KAL++A  N+  N     F  +        +  +D+IVSNPPY+     + +   V +++
Sbjct: 144 KALDVAALNSKANSTDISFGRVDVLGDYPTDKKYDIIVSNPPYVLESEKEQMERNVLEYE 203

Query: 192 PRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           P  +L   D   + L  Y+ IAD     L   G    EI   +  + V++ E +    V 
Sbjct: 204 PHTALFVTDN--NALLFYKRIADIALNLLTPAGRLYFEINQAKGAETVKMLEEKGFTEVA 261

Query: 249 AFKDYGGNDRVL 260
            F+D    DR++
Sbjct: 262 LFQDLSKKDRMI 273


>gi|297531577|ref|YP_003672852.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. C56-T3]
 gi|297254829|gb|ADI28275.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. C56-T3]
          Length = 293

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 7/191 (3%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103
           ++ H  I  ++G+  FY     ++     PRPETE LV   L   +PR+   R  + ++D
Sbjct: 65  AVDHVPIQYLIGYESFYGRPFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           +GTG+GA+ + L  E+        DIS  AL +A+ NA   G +  F   D LQ     +
Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +    DV+VSNPPYI       L   V++++P  +L GG DGL  YR  A  +   L   
Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241

Query: 221 GLCSVEIGYNQ 231
            L + E+G  Q
Sbjct: 242 ALAAFEVGAGQ 252


>gi|56421912|ref|YP_149230.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426]
 gi|56381754|dbj|BAD77662.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426]
          Length = 293

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 95/191 (49%), Gaps = 7/191 (3%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILD 103
           ++ H  I  ++G+  FY     ++     PRPETE LV   L   +PR+   R  + ++D
Sbjct: 65  AVDHVPIQYLIGYESFYGRLFLVNRHVLIPRPETEELVLGVLK-RVPRLFAGRKRIDVVD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           +GTG+GA+ + L  E+        DIS  AL +A+ NA   G +  F   D LQ     +
Sbjct: 124 VGTGSGAIAVTLALENKALSVTATDISEAALAVARENARRLGANVSFLCGDLLQP--IMA 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +    DV+VSNPPYI       L   V++++P  +L GG DGL  YR  A  +   L   
Sbjct: 182 MGWTVDVVVSNPPYIPETDAAMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAP 241

Query: 221 GLCSVEIGYNQ 231
            L + E+G  Q
Sbjct: 242 ALAAFEVGAGQ 252


>gi|325479469|gb|EGC82565.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 264

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 109/212 (51%), Gaps = 10/212 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +   +G  +FY +   +      PR ETE++VD    + +    K+D  +ILD+GTG+GA
Sbjct: 58  LQYAIGEWEFYGLNFKVDKRALIPRFETEIIVD----YLIKSDWKKD--KILDIGTGSGA 111

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L+L K+    + +  DIS  AL++A+ N    GV      ++SD F  + G FD+I+S
Sbjct: 112 IALSLGKKLGKSEILASDISDDALDLARENKKRIGV-HNVSFIKSDIFEEISGKFDIIIS 170

Query: 171 NPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           NPPYI     D   L+ R + +P+ +L    +GL  Y+ I    + +LN  G    EIGY
Sbjct: 171 NPPYINKS--DYENLDKRLYHEPKSALFAEENGLYFYKKIVSEANNYLNCGGKLVFEIGY 228

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +QK  +  +        +   KDY   DR ++
Sbjct: 229 DQKQSLFELLNKFDFKNLKCIKDYNDFDRFII 260


>gi|308175428|ref|YP_003922133.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           DSM 7]
 gi|307608292|emb|CBI44663.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           DSM 7]
          Length = 286

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 23/253 (9%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76
           +D   +L + Q     + + R  +H  +H+       I+G   FY     ++ D   PRP
Sbjct: 35  MDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKEQFYGREFFVNFDVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ETE +V     F L   +KR     + + ++D+GTG+GA+ + L  E   F     DIS 
Sbjct: 95  ETEEVV-----FHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALECGHFSVAASDISK 149

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL++A+ NA   G   RF  LQ D    F S     D+IVSNPPYI    +  L   VR
Sbjct: 150 EALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVR 207

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLV 247
             +P  +L  G DGL  Y+   + +   +    L   EIGYNQ   V  +F  S     V
Sbjct: 208 FHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAVEDLFRHSFPNAEV 267

Query: 248 NAFKDYGGNDRVL 260
              KD  G DR +
Sbjct: 268 EVVKDINGKDRTV 280


>gi|315637173|ref|ZP_07892395.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22]
 gi|315478540|gb|EFU69251.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22]
          Length = 277

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 13/211 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG- 109
           +  I+G   FY  +  +      PRPETE+LV++A+       +K++ +++L++GTG+G 
Sbjct: 67  LEYIIGKASFYGEQFLIKEGVLIPRPETEILVENAVEI---LKDKKEPIKVLEIGTGSGI 123

Query: 110 -AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
            +V LA+L E+   K + VDI+ KA+E+AK NA+ + V E+ D   S+ + +V E   ++
Sbjct: 124 ISVMLAMLIEN--IKIIAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINL 181

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +SNPPYI +     L L V+ F+P  +L GG  G    + I    +       LC  E+
Sbjct: 182 TISNPPYIANDY--KLPLNVK-FEPSNALFGGNLGDELLKDIIKQTNDKKIPYLLC--EM 236

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           GY+QK  +   F+   +   N +KDY   DR
Sbjct: 237 GYDQKKSLEEYFKQFNVESYNFYKDYENFDR 267


>gi|312134917|ref|YP_004002255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor owensensis OL]
 gi|311774968|gb|ADQ04455.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor owensensis OL]
          Length = 288

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 124/252 (49%), Gaps = 12/252 (4%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +  +   +VI++ D  ++  +   + NAI + L+   +        F  +   +  +   
Sbjct: 41  ILDIDKTEVILNKDLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLI 100

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISC 131
           PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL +   F   K + VDIS 
Sbjct: 101 PRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCR---FLDCKVLAVDISE 153

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRD 189
           +ALE+A+ NA  NGV  R   ++S+ F ++     FD I+SNPPYI       L  +V  
Sbjct: 154 RALEVARKNAKLNGVENRVSFVRSNLFENIPKNLRFDAILSNPPYISESERFKLEKQVLK 213

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P I+L    DGL  ++ IA+    +L   G    E+G++Q  +V RI E      + +
Sbjct: 214 -EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKS 272

Query: 250 FKDYGGNDRVLL 261
            KD    +R + 
Sbjct: 273 RKDLNNIERCIF 284


>gi|52082234|ref|YP_081025.1| YwkE protein [Bacillus licheniformis ATCC 14580]
 gi|52787626|ref|YP_093455.1| YwkE [Bacillus licheniformis ATCC 14580]
 gi|52005445|gb|AAU25387.1| YwkE [Bacillus licheniformis ATCC 14580]
 gi|52350128|gb|AAU42762.1| YwkE [Bacillus licheniformis ATCC 14580]
          Length = 288

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 106/223 (47%), Gaps = 12/223 (5%)

Query: 46  LKHESI--HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           L H+ +    I G   FY    +++     PRPETE +V++ L+ +       D ++ +D
Sbjct: 62  LHHQGVPVQYITGKESFYGREFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+GA+ + L  ESP F     DIS +AL  A+ NA  + +  + D L  D    +  
Sbjct: 122 VGTGSGAIAVTLALESPRFSVTATDISEQALSTARHNA--DRLGAKVDFLCGDLLEPLIA 179

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +   DVIVSNPPYI    +  L   VR  +P  +L  G DGL  Y+     +   +   
Sbjct: 180 RQKKADVIVSNPPYISEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQ 239

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVL 260
            L   EIG+ Q   V  +F   + F    V   KD  G DR++
Sbjct: 240 ALVVFEIGWTQGNAVKDMF--HRFFPDADVRVKKDLNGKDRIV 280


>gi|220908864|ref|YP_002484175.1| HemK family modification methylase [Cyanothece sp. PCC 7425]
 gi|219865475|gb|ACL45814.1| modification methylase, HemK family [Cyanothece sp. PCC 7425]
          Length = 314

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 97/204 (47%), Gaps = 25/204 (12%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSAL-------AFSLPRIEKRDVVRILDLGTGTG 109
           WR   N++L +S     PRPETE L+D A+         S P           DLGTG+G
Sbjct: 90  WR---NLKLHVSPAVLIPRPETEELIDLAIEAVNYHPELSPPHPSSPHWA---DLGTGSG 143

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN---------AVTNGVSERFDTLQSDW--- 157
           A+ L L    P  K   VD S  ALE+A  N              + +R    Q DW   
Sbjct: 144 AIALGLAYSFPTAKIHAVDRSAAALEMAGRNRDRQDWGKDGGAGTLQDRLHFYQGDWLEP 203

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            + ++G    IVSNPPYI + ++D L  EV + +P ++LDGG DGL+  R I +  + +L
Sbjct: 204 LAKLKGHLTGIVSNPPYIPTELLDELEREVVEHEPSLALDGGADGLTAIREIIETAADYL 263

Query: 218 NKDGLCSVEIGYNQKVDVVRIFES 241
              G+  +E+   Q   V ++ E 
Sbjct: 264 QPGGVLLLEMMSGQDQQVRQLLEQ 287


>gi|317401194|gb|EFV81840.1| protein-(glutamine-N5) methyltransferase [Achromobacter
           xylosoxidans C54]
          Length = 275

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 11/219 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  +LG R+F      ++ D   PRP+TE+LV++AL      +  +    +LD
Sbjct: 56  RRLAGEPMAYLLGQREFMGHMFRVTPDVLIPRPDTEVLVETALEC----VAGQAAPAVLD 111

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           LGTG+GA+ +++       + +  D+S  AL +A  NA     S RF  ++  W+ +V  
Sbjct: 112 LGTGSGAIAISIALARRDARVMASDVSAAALAVAAGNAWELTASVRF--VEGSWYDAVPA 169

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG FD+IVSNPPY+ S        +VR F+PR +L  G DGL   R I  G  RHL   
Sbjct: 170 GEG-FDLIVSNPPYVASDDPHLGQGDVR-FEPRGALTDGADGLEDLRRIVAGAHRHLKAG 227

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   +E G++Q   V  +  +     V++ +D  G +R+
Sbjct: 228 GALWMEHGWDQAEAVRALLAATGFSDVHSRRDLAGIERI 266


>gi|256963677|ref|ZP_05567848.1| modification methylase HemK [Enterococcus faecalis HIP11704]
 gi|307271623|ref|ZP_07552894.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0855]
 gi|256954173|gb|EEU70805.1| modification methylase HemK [Enterococcus faecalis HIP11704]
 gi|306511501|gb|EFM80500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0855]
 gi|315170192|gb|EFU14209.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1342]
          Length = 277

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S KAL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   + ++  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|295090781|emb|CBK76888.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cf. saccharolyticum K10]
          Length = 338

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 107/245 (43%), Gaps = 40/245 (16%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G 
Sbjct: 92  LQHILGSQEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGC 146

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV---------------------------- 142
           + L+L     +      D+S  AL +A  NA                             
Sbjct: 147 IGLSLAVLGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTV 206

Query: 143 ------TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                  N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++
Sbjct: 207 WAGKNRENAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLA 266

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           LDG  DGL  YR +A+   ++L + G    EIG  Q   V  +   +    +   KD  G
Sbjct: 267 LDGSADGLHFYRILAEECRKYLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPG 326

Query: 256 NDRVL 260
            DRV+
Sbjct: 327 LDRVV 331


>gi|73748900|ref|YP_308139.1| SAM-dependent methyltransferase HemK family protein
           [Dehalococcoides sp. CBDB1]
 gi|73660616|emb|CAI83223.1| SAM-dependent methyltransferase HemK family [Dehalococcoides sp.
           CBDB1]
          Length = 277

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 10/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       +   L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQHRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIA----RHYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+      
Sbjct: 137 AYVYATDISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFE 240
            L     + +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + + I +
Sbjct: 197 LL-----NGEPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     +    DY G  R++
Sbjct: 252 TLPQASLEIISDYAGIPRIV 271


>gi|150003436|ref|YP_001298180.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
           8482]
 gi|254881265|ref|ZP_05253975.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|149931860|gb|ABR38558.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
           8482]
 gi|254834058|gb|EET14367.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 278

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 121/255 (47%), Gaps = 12/255 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V G+S  ++    D+     +R  L + +VR  K E I  I+G  +FY +   ++ 
Sbjct: 28  LLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPET  LVD  +     R  K   VRILD+GTG+G + ++L K     + V  D+
Sbjct: 88  HVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVSWDV 142

Query: 130 SCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S KAL++A+ N   NGV    E+ D L +   S     FDVIVSNPPYI       +   
Sbjct: 143 SEKALQVAERNCRRNGVRVILEQRDVLLA---SPAGERFDVIVSNPPYITEKERADMSAN 199

Query: 187 VRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +    +  
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259

Query: 246 LVNAFKDYGGNDRVL 260
            +   KD   NDR++
Sbjct: 260 NIKLRKDLFQNDRMI 274


>gi|229549321|ref|ZP_04438046.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255972030|ref|ZP_05422616.1| modification methylase HemK [Enterococcus faecalis T1]
 gi|256957797|ref|ZP_05561968.1| modification methylase HemK [Enterococcus faecalis DS5]
 gi|257079735|ref|ZP_05574096.1| modification methylase HemK [Enterococcus faecalis JH1]
 gi|294779687|ref|ZP_06745077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis PC1.1]
 gi|300861227|ref|ZP_07107314.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis TUSoD Ef11]
 gi|307270730|ref|ZP_07552021.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4248]
 gi|312953587|ref|ZP_07772424.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0102]
 gi|229305558|gb|EEN71554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255963048|gb|EET95524.1| modification methylase HemK [Enterococcus faecalis T1]
 gi|256948293|gb|EEU64925.1| modification methylase HemK [Enterococcus faecalis DS5]
 gi|256987765|gb|EEU75067.1| modification methylase HemK [Enterococcus faecalis JH1]
 gi|294453241|gb|EFG21653.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis PC1.1]
 gi|300850266|gb|EFK78016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis TUSoD Ef11]
 gi|306513040|gb|EFM81681.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4248]
 gi|310628425|gb|EFQ11708.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0102]
 gi|315035853|gb|EFT47785.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0027]
 gi|315151854|gb|EFT95870.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0031]
 gi|323481493|gb|ADX80932.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis 62]
 gi|327535787|gb|AEA94621.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           OG1RF]
 gi|329578087|gb|EGG59500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1467]
          Length = 277

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S KAL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   + ++  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|320167100|gb|EFW43999.1| Hemk1 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 94/187 (50%), Gaps = 29/187 (15%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVR-- 100
           L+ + I  ILG  DF    L +    F PRPETE LVD     L  +LP   + +     
Sbjct: 207 LEGKPIQHILGEWDFGLHTLHMHPRVFIPRPETEKLVDMVVKDLKSTLPSSAENNTSSWI 266

Query: 101 ----------------------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                                 IL++G GTGA+ L++L E P    + +D++  A E+ +
Sbjct: 267 NTTPSSTPSALQISLLVNRPPCILEVGPGTGAIGLSILAELPGLHYLALDVNPFACELTR 326

Query: 139 SNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            NA   G+  R     +  + F+ +EG FD IVSNPPYI S  +  L +EVR FDP ++L
Sbjct: 327 VNAQRLGLESRTAVHHVAFEQFTLLEGQFDAIVSNPPYIPSREISELDIEVRGFDPHVAL 386

Query: 197 DGGIDGL 203
           DGG++GL
Sbjct: 387 DGGVEGL 393


>gi|257084461|ref|ZP_05578822.1| modification methylase HemK [Enterococcus faecalis Fly1]
 gi|256992491|gb|EEU79793.1| modification methylase HemK [Enterococcus faecalis Fly1]
          Length = 277

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 13/210 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
           +L    P ++ + +D+S +AL +AK NA   G    F   Q +    V     D+++SNP
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEF--YQGNGLQPVASEKIDLLISNP 185

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ Q 
Sbjct: 186 PYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQG 245

Query: 233 VDVVRIFES---RKLFLVNAFKDYGGNDRV 259
             +  +  +   +K   +   KD  GNDR+
Sbjct: 246 AALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|256372570|ref|YP_003110394.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009154|gb|ACU54721.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 255

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 9/214 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG   F    L +      PR ETE LV+  LA        R  +R+LD+GTG+
Sbjct: 39  EPLQYVLGTWSFRGHELRVDHRALIPRYETEQLVEHVLAAV------RTGMRVLDVGTGS 92

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDV 167
           GA+ ++L  E P  +  G D+  +AL +A+ N    G       ++  WF   E    DV
Sbjct: 93  GAIAISLALEGPRLEVTGSDVDPRALALARENVRATGAL--VTLVRRSWFEGAEPESLDV 150

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +V+NPPY+ +   + L   VR F+PR++L  G  GL     +  G    L   G   +EI
Sbjct: 151 VVANPPYVAASEWERLDPAVRVFEPRVALVPGPSGLEGPMAVIGGARVALRPGGWLFMEI 210

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G  Q   +V    ++    V   +D  G  RVL+
Sbjct: 211 GETQGERLVAEASAQGYGDVTVERDLAGRPRVLV 244


>gi|157737442|ref|YP_001490125.1| modification methylase [Arcobacter butzleri RM4018]
 gi|157699296|gb|ABV67456.1| modification methylase [Arcobacter butzleri RM4018]
          Length = 277

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 116/211 (54%), Gaps = 13/211 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG- 109
           +  I+G   FY  +  +      PRPETE+LV++A+       +K++ +++L++GTG+G 
Sbjct: 67  LEYIIGKASFYGEQFLVKEGVLIPRPETEILVENAVEILK---DKKEPIKVLEIGTGSGI 123

Query: 110 -AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
            +V LA+L E+   K + VDI+ KA+E+AK NA+ + V E+ D   S+ + +V E   ++
Sbjct: 124 ISVMLAMLIEN--IKIIAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINL 181

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +SNPPYI +     L L V+ F+P  +L GG  G    + I    +       LC  E+
Sbjct: 182 TISNPPYIANDY--KLPLNVK-FEPSNALFGGNLGDELLKDIIKQTNDKKIPYLLC--EM 236

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           GY+QK  +   F+   +   N +KDY   DR
Sbjct: 237 GYDQKKSLEEYFKQFNVESYNFYKDYENFDR 267


>gi|157105369|ref|XP_001648837.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti]
 gi|108880106|gb|EAT44331.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti]
          Length = 328

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 19/220 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I+   +F ++ L +    F PRPETE L++      L +I+ +  ++ L++G GTGA
Sbjct: 109 IQYIIHEWEFRDLTLKMVPPVFIPRPETEELIE----LILQQIDAQKEMKFLEIGCGTGA 164

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--------DTLQSDWFSSVE 162
           + L++LK +P    V +D S  A E+   NA  +G+ +          D L ++  S   
Sbjct: 165 ISLSILKHAPQASAVALDQSTLACELTMENAKNHGLVDNLRIFRHKLVDKLPTELESHK- 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD+IVSNPPY+ S  +  L  E++ ++   +LDGG DGL+  + I D   +HL   G+
Sbjct: 224 --FDMIVSNPPYVPSRQLLALEPEIKVYEDLRALDGGPDGLTVVKAILDIAGKHLEPSGV 281

Query: 223 CSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
             +E+  +    + +  E       L  ++++KD    +R
Sbjct: 282 LWLEVDSSHPPLIEKYLEEAVPELGLKFMSSYKDMFRKER 321


>gi|325474791|gb|EGC77977.1| HemK family Modification methylase [Treponema denticola F0402]
          Length = 329

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%), Gaps = 35/244 (14%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  + G +DF+     ++ +   P+P+TE LV+ AL F+  +++K + + +LD+ TG+G 
Sbjct: 80  IAYLTGTKDFFGRTFYVNENVLIPKPDTETLVEHALNFAKEKLKKNESLFVLDICTGSGC 139

Query: 111 VCLALLKE----------------------SPF---FKGVGVDISCKALEIAKSNA---V 142
           + L+L  E                      S F   F  +  DIS +AL++ K N    +
Sbjct: 140 IGLSLAAELYENLSQTSDAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDYLL 199

Query: 143 TNGVSERFDTLQSDW---FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            + + +R   +++D    F  V   +  +D+I +NPPY+ S +++ L LE    +PR++L
Sbjct: 200 PSALYKRVLAVKADLHLPFPCVPESKRSYDLITANPPYVPSKLMESL-LEDGRSEPRLAL 258

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           DGGI+GL     +A+     LN  G   VE+G         IF S     V   KD  GN
Sbjct: 259 DGGIEGLDLIPPLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGN 318

Query: 257 DRVL 260
           DRV+
Sbjct: 319 DRVI 322


>gi|313678883|ref|YP_004056623.1| methyltransferase, HemK family [Mycoplasma bovis PG45]
 gi|312950570|gb|ADR25165.1| methyltransferase, HemK family [Mycoplasma bovis PG45]
          Length = 240

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 13/209 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I+G+ ++ NVR+ L+ +   PR ETE LV     F L +   +  +++LDL TG+G 
Sbjct: 34  IQYIMGYVEYANVRINLNHNVLIPRYETEELV-----FILLKEYLKPGMKVLDLCTGSGF 88

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDVIV 169
           + LAL K     +    DI  +A+   K NA+ N G  E  + +QSD F  + G FDVIV
Sbjct: 89  IGLALKKNLNSIRLTLSDIDSEAILQTKENAILNFGNDENIEIVQSDCFKDITGKFDVIV 148

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+     D +   V  F+P I+L     G   Y  I +    +LN+ G+ + EI  
Sbjct: 149 SNPPYLTYDDKD-VDESVSKFEPAIALFSPDSGWYFYEKILNEAKTYLNEGGILAFEI-- 205

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           N K     IF+  K+  V   KD    DR
Sbjct: 206 NPK----HIFKWEKIPGVRILKDMSKKDR 230


>gi|257421857|ref|ZP_05598847.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
 gi|257163681|gb|EEU93641.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
 gi|315155438|gb|EFT99454.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0043]
          Length = 277

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVTSEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q V +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGVALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|259046348|ref|ZP_05736749.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella adiacens ATCC 49175]
 gi|259036985|gb|EEW38240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella adiacens ATCC 49175]
          Length = 290

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 116/229 (50%), Gaps = 14/229 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   ++R  K E + +I G  +F      ++ DT  PRPETE LV    +F    +E+  
Sbjct: 65  LEPELLRLSKFEPLQQITGVAEFLGEEFIVTKDTLIPRPETEELVLKVQSF----LEQCP 120

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  +L++G GTG + L+L +        G DIS +AL +A+ N   +  + + +   SD 
Sbjct: 121 VGNVLEIGVGTGCIILSLERLVGRHHYKGCDISEEALIVAQKN--RDKFNLQTELFYSDV 178

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +S+V    F+ I+SNPPYI       +   VR ++P  +L    +GL+ Y  IA+ +   
Sbjct: 179 YSNVPREQFECIISNPPYIAFSEEALMDESVRLYEPIQALFAENEGLAIYEKIANRLEEF 238

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFE----SRKLFLVNAFKDYGGNDRVLL 261
           L   G    EIG+NQ   V RIF     +RK   V+  KD  G DR+++
Sbjct: 239 LTDSGHAFFEIGFNQGASVQRIFSEACPNRK---VSIQKDIAGLDRMII 284


>gi|315172489|gb|EFU16506.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1346]
          Length = 277

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKV---DVVRIFESRKLFLVNAFKDYGGNDRV 259
           Q     +++R    +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLRAAYPQKTIKIE--KDLSGNDRL 273


>gi|320120317|gb|ADW16126.1| hypothetical protein HMPREF0389_01680 [Filifactor alocis ATCC
           35896]
          Length = 279

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 5/216 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            I  ++  + FY     +S     PRP+TE+L++  L      I     V  +++G G+G
Sbjct: 68  PIAYLIHKKPFYGRDFFVSPGVLIPRPDTEILIEKTLDV----IPDNKQVSGIEIGCGSG 123

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168
           A+ + LL E+     V  DI    +EI   NA  N V  R   +++D F+ +    FD I
Sbjct: 124 AISITLLLENRLLNMVATDIEAIPIEITSKNANLNNVQNRLRLIKTDLFNGIPSKQFDFI 183

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +SNPPYI       L  +V D++P+++L    +G+  +R I +   + L +DG  + EIG
Sbjct: 184 ISNPPYIPYDDSTKLMKDVIDYEPKVALFAEENGIFFFRKILEDGKKFLKEDGFVAFEIG 243

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +Q   +  +        V   +D  G DRV++  R
Sbjct: 244 CSQAKQIRELCLKEGFHKVLIHRDLHGLDRVVIAFR 279


>gi|284051235|ref|ZP_06381445.1| modification methylase, HemK family protein [Arthrospira platensis
           str. Paraca]
          Length = 310

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 13/215 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTG 107
           ++ WR+F    L +S     PRPETEL++D A ++     E  + +        +DLGTG
Sbjct: 91  VVHWRNF---ALKVSPAVLIPRPETELIIDIAASYHATSSEAINSICQPGSGNWVDLGTG 147

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164
           +GA+ L L    P      VD S  AL IA  NA + G   R    Q  W++   S++G 
Sbjct: 148 SGAIALGLASVFPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGK 207

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
              +V+NPPYI S  +  L  EV   +P  +LDGG  GL     +     + L   G+  
Sbjct: 208 VSGMVANPPYIPSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWI 267

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           VE+   Q   V  + ES   +  +    D  G DR
Sbjct: 268 VEMMAGQGQAVTSMLESAGCYRDIKILPDLAGIDR 302


>gi|169832289|ref|YP_001718271.1| HemK family modification methylase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169639133|gb|ACA60639.1| modification methylase, HemK family [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 287

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 17/247 (6%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           +P+  L + +R      +   L    +  + G R+F  +   ++ +   PRPETEL+V+ 
Sbjct: 49  EPERALTETERGRFEQMVRDRLAGRPVAYLTGHREFMGLDFVVTPEVLVPRPETELIVEE 108

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL       E   VV   D+GTG+GA+ ++L +     + +  D+S  AL +A+ N   +
Sbjct: 109 ALRLMSGGPEGSLVV---DVGTGSGAIAVSLARYVRGARVLATDLSEAALTVARLNVGRH 165

Query: 145 GVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            V+  F    L     +++ G  D+I++N PYI +  +D L   VR  +PR++LDGG DG
Sbjct: 166 RVAVEFLLGDLMEPIPAALAGQIDLIIANLPYIPTAQMDTLPRAVR-AEPRLALDGGPDG 224

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDYGGND 257
           L  YR +     R L   G    EI   Q    + I     +ESR L       D    +
Sbjct: 225 LDLYRRLVPQAHRFLRPGGSLLFEIAPGQGRAALTIVPSPDWESRIL------TDLAERE 278

Query: 258 RVLLFCR 264
           RV++ C+
Sbjct: 279 RVVIACK 285


>gi|325928211|ref|ZP_08189419.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325929424|ref|ZP_08190552.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325540199|gb|EGD11813.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325541427|gb|EGD12961.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
          Length = 286

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%)

Query: 40  NAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           NA+V R    E +  + G R F+ + L +S  T  PR +TE+LV+     +L R++    
Sbjct: 58  NALVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEVLVE----LALERLDTVPG 113

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+ DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA ++G+    D  Q  WF
Sbjct: 114 RRVADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGL-RNVDCRQGSWF 172

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL
Sbjct: 173 APLAGEAFDLIASNPPYIAAHDPHLKQGDLR-YEPASALASGSDGLDDIRLIVADAPAHL 231

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 232 VPGGWLLLEHGWDQGAAVAELLAARGFAAVATHQDLERRDRVTL 275


>gi|110636627|ref|YP_676834.1| protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279308|gb|ABG57494.1| possible protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC
           33406]
          Length = 287

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 17/219 (7%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTG 107
           E +  I+G   FY+    ++  T  PRPETE LV      +L   E      +I+D+GTG
Sbjct: 74  EPVQYIIGKTFFYDSYFNVTPATLIPRPETEELV------ALIITENNSAAPQIIDIGTG 127

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           TG + ++L K+    +   VDIS +AL +A+ NA+ N VS  F  L+ ++    SS++  
Sbjct: 128 TGCIAISLAKKIKGARVTAVDISTEALAVAEENALKNEVSVSF--LEMNFLTQHSSIQSS 185

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDG 221
           FD+IVSNPPY+       +   V   +P ++L   DG  + L +Y  +    S HL+KDG
Sbjct: 186 FDIIVSNPPYVLQSEKKEMRENVLAHEPHLALFVEDG--NALIYYDALLKFASSHLHKDG 243

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               EI   +  +++++  +         KD    DR++
Sbjct: 244 TFYAEINEQKGNELIKLAHTYGFADSTIIKDLYQKDRII 282


>gi|312795902|ref|YP_004028824.1| peptide release factor-glutamine N5-methyltransferase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167677|emb|CBW74680.1| Peptide release factor-glutamine N5-methyltransferase (EC 2.1.1.-)
           [Burkholderia rhizoxinica HKI 454]
          Length = 321

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 38/256 (14%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           RF    A  R ++ E I +++G R+F+ +   ++     PRPETELLV+ AL      ++
Sbjct: 68  RFLALQA--RRVEGEPIAQLVGSREFFGLDFDVTPHVLIPRPETELLVECALNA----VQ 121

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------------- 141
                RILDLGTG+GA+ +A+    P  + V  D    AL++A+ NA             
Sbjct: 122 TIPSPRILDLGTGSGAIAIAIAHTRPDARIVATDRCAGALDVARRNARRLLGDAALAPAL 181

Query: 142 ---------VTNG--VSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCL 183
                    VT+G     R       WF ++          FD IVSNPPYI +      
Sbjct: 182 PVSAARHDFVTSGTPTQPRLALRHGTWFDALSEPHRLAPARFDAIVSNPPYIAASDPHLR 241

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGLS  R I  G    L       +E GY+Q   V  + ++  
Sbjct: 242 EGDLR-FEPLDALTDHADGLSAIRAIVTGSVAWLAPGATLWLEHGYDQAEAVRALLDAHG 300

Query: 244 LFLVNAFKDYGGNDRV 259
              V + +D  G +RV
Sbjct: 301 FDSVRSVRDLAGIERV 316


>gi|296273266|ref|YP_003655897.1| HemK family modification methylase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097440|gb|ADG93390.1| modification methylase, HemK family [Arcobacter nitrofigilis DSM
           7299]
          Length = 274

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 101/202 (50%), Gaps = 9/202 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     +  +   PRPETE+LV+ A    L +IE   VV I   GTG+G + + L K  
Sbjct: 76  FYGETFIIKQNVLIPRPETEILVEKAFE-KLKQIENPKVVEI---GTGSGIISVMLSKLL 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  K   VDI+  ALE+AK NA  + V  +   ++SD    V G FD+ +SNPPYI +  
Sbjct: 132 PQLKVTAVDINDDALELAKENAKKHSVENQISFIKSDLLKEVSGDFDMCISNPPYISNNY 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L   V+ ++P+ +L GG  G    + +   V+    K   C  E GY+QK  +    
Sbjct: 192 V--LPHNVK-YEPKNALFGGEIGDELLKDLIKEVTEKNIKYLYC--EYGYDQKESIKNYM 246

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           +   +  +  +KDY   DR  L
Sbjct: 247 KKFNVKSLEFYKDYSDFDRGFL 268


>gi|298372803|ref|ZP_06982793.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275707|gb|EFI17258.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroidetes oral taxon 274 str. F0058]
          Length = 283

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 23/260 (8%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L ++ GL++ + ++     L D Q   + +A+ R  ++E I  I+G+ DFY + L    
Sbjct: 30  LLDKICGLNTTKRLISDKIYLSDEQNGRIDDALERLKRYEPIQYIIGYTDFYGLTLRTDR 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLA-LLKESPFFKGVG 126
               PRPETE LVD  L       E      ++D+ TG+G  AVCLA  LKE+   K   
Sbjct: 90  RALIPRPETEELVDWILQ------ECSTAKNVIDICTGSGCIAVCLAKYLKEA---KVSA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTL--QSDWFS--SVEGLFDVIVSNPPYIE-SVIVD 181
           +DIS +A+ +A+ NA    +++R D +  Q D  +  S+   FD+IV+NPPY+  +  +D
Sbjct: 141 LDISSEAIGLARENA----LNQRLDIVFYQKDIMATDSLWQKFDLIVANPPYVTLNEKID 196

Query: 182 CLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P ++L     D L  YRTIA    ++L   G+   EI      + V +  
Sbjct: 197 MMP-NVLDYEPSLALFVDDEDPLIFYRTIARFARKNLVDGGMLFFEINRKFGKETVDLLA 255

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           S     +   KD  GNDR +
Sbjct: 256 SMGFVDIVPKKDISGNDRFI 275


>gi|218459800|ref|ZP_03499891.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli Kim 5]
          Length = 141

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 67/103 (65%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           SS +++      L   Q   ++ A+ R L HE +HRILG R+FY + L LS++T EPRP+
Sbjct: 39  SSTELLTRSAEKLSPDQLVMISKAMERRLDHEPVHRILGEREFYGLPLQLSAETLEPRPD 98

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P
Sbjct: 99  TEILVDTVLAYLKDLAKVHGHLHILDIGTGTGAICLALLSECP 141


>gi|330996374|ref|ZP_08320257.1| protein-(glutamine-N5) methyltransferase [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573232|gb|EGG54846.1| protein-(glutamine-N5) methyltransferase [Paraprevotella
           xylaniphila YIT 11841]
          Length = 284

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 19/259 (7%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+   + +  +      +R  L N + R  + E +  +LG  DF     +++     PR
Sbjct: 34  GLTQVDICMGRERTFSLEERRDLENIVKRLSQKEPVQYVLGQADFCGRTFSVAPGVLVPR 93

Query: 76  PETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           PETE L +       A  FS P I        LD+GTG+G + + L +E P  +   +DI
Sbjct: 94  PETEELAEWIIRDEKASEFSSPHI--------LDIGTGSGCIAITLSQELPQAQVSAIDI 145

Query: 130 SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           S +AL IA+ NA   GV+  F   D L S        L+D+IVSNPPYI     + +   
Sbjct: 146 SPQALAIARENAECLGVAVNFRCQDILDSPSKEQDSPLWDIIVSNPPYICEHEREDMEEN 205

Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V  ++P  +L     D L  YR I +   + L + G   +EI      +  R+F+   L 
Sbjct: 206 VLRYEPSQALFVPDHDPLLFYRAIGEYAVKMLKEGGRLYMEINRAYGRETARLFQHLGLR 265

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GN+R ++ CR
Sbjct: 266 DIIVRKDLYGNER-MVRCR 283


>gi|300769799|ref|ZP_07079679.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300763250|gb|EFK60066.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 285

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 117/258 (45%), Gaps = 16/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  VTG++  Q  V     + + Q+  L   +   L+ + I  IL   DFY     ++  
Sbjct: 32  LEEVTGINRMQYAVRNTEAVTEEQKIQLDRILQELLRRKPIQHILKKADFYGEIFEVNEF 91

Query: 71  TFEPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
              PRPETE LV   +      ++P       ++I+D+GTG+G + + L K  P      
Sbjct: 92  VLIPRPETEELVHLIIGHHRSSAVP-------LKIIDIGTGSGCIPVILKKHMPSAHVSA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           +DIS +A+ +AK NA   G    F   D L+ ++  + E L+D+IVSNPPYI     + +
Sbjct: 145 LDISKEAIAVAKRNAKKLGTDIHFVNADILEWEYLFT-EQLYDIIVSNPPYITPKEKEDM 203

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V +F+P ++L       L  Y TIA     HL   G    EI      +   +   +
Sbjct: 204 HSNVLEFEPHLALFVEESTPLLFYETIASFALVHLKPSGDLYFEINQYYGPETANMLRKK 263

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DR++
Sbjct: 264 GFSTVELIKDMHGADRMI 281


>gi|255020173|ref|ZP_05292242.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970315|gb|EET27808.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus
           caldus ATCC 51756]
          Length = 304

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 13/233 (5%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLT---NAIVRSLKHESIHR-----ILGWRDFYNVRL 65
            + L + ++ ++P+ + + RQ         AI+ +     I R     ILG   F  +R 
Sbjct: 45  ASALVARRLGLEPEDLPEVRQCLLTRAEREAILDAFYQREILRRPTAYILGEAWFAGLRF 104

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR   E  ++   A   P ++   V RIL++GTG+G + +AL ++ P     
Sbjct: 105 AVDERVLIPRSLLEPFIEEGFA---PWVQAERVRRILEIGTGSGCMAVALARQFPQASVD 161

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            VDIS + LE+A  N   +G+ ER     SD FS+V    FD+IVSNPPY+++  +  L 
Sbjct: 162 AVDISPQVLELAAQNVRRHGLEERIRLYTSDIFSAVGPARFDLIVSNPPYVDAAAMADLP 221

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            E R  +PR++L  G DGL     + D    HL   G   VE G  +   + R
Sbjct: 222 PEYR-HEPRLALAAGEDGLDCILPLLDQAPDHLLPGGALVVETGDAEHALLAR 273


>gi|46446287|ref|YP_007652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46399928|emb|CAF23377.1| putative HemK protein [Candidatus Protochlamydia amoebophila UWE25]
          Length = 279

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 115/227 (50%), Gaps = 10/227 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           N + R +K E +  I G  DFY   + ++     PR ETE+LVD    + L   +K    
Sbjct: 56  NYLKRRMKGEPLAYIQGSIDFYGCSIQVNPFVLIPRQETEILVDKISTY-LSHQKKLSGK 114

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            + DL +G+G + +AL K+ P    +  D+S  AL +A+SNA  N V   F  LQ D   
Sbjct: 115 ILWDLCSGSGCIGIALKKKFPQLHVISSDLSSAALSLARSNAQDNQVEVEF--LQGDLLE 172

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             EG     I+ NPPYI       L LEV++F+P+++L GG  GL  Y+ +A+ +  +L 
Sbjct: 173 PFEGRRAHFIICNPPYISEAEFKDLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLY 232

Query: 219 KDGLCSVEIGYNQKVDVVRIFES---RKLFLVNAFKDYGGNDRVLLF 262
                  EIGY Q   + +IF+S   ++ FL N   D+ G+ R    
Sbjct: 233 PHAKIWFEIGYKQGDSLKKIFKSSYWKRAFLEN---DWAGHHRFFFL 276


>gi|294631401|ref|ZP_06709961.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. e14]
 gi|292834734|gb|EFF93083.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. e14]
          Length = 279

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 110/243 (45%), Gaps = 17/243 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+    D+  D R        I R  + E +  I G   F  + L
Sbjct: 24  DAEELAAFVHGVKRGQLHTVKDADFDAR----YWEVIARREQREPLQHITGRAYFRYLEL 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LAL +E P  +
Sbjct: 80  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIV 180
              V++S  AL   + N   +    R D  Q D    F  ++G  D+++SNPPYI     
Sbjct: 136 VHAVELSEDALRWTRKNVEGS----RVDLRQGDALTAFPDLDGQVDLVISNPPYIPLTEW 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +  E RD+DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF 
Sbjct: 192 EYVAPEARDYDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIFT 251

Query: 241 SRK 243
             +
Sbjct: 252 EER 254


>gi|311033343|ref|ZP_07711433.1| HemK family modification methylase [Bacillus sp. m3-13]
          Length = 260

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 25/228 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-----------DVV 99
           +  ++G  +FY     +S +   PRPETE LV   L     R++K            + +
Sbjct: 37  VQYLMGKEEFYGRSFFVSEEVLIPRPETEELVVGVL----DRVKKHFGDDTVSDAAGEKL 92

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
            ++D+GTG+GA+ + L  E+        DI+ ++LE+A  NA   G    F  LQ D   
Sbjct: 93  SVVDVGTGSGAIAITLALENSSLNVHATDIAGESLEVAMDNAEALGAEVAF--LQGDLLL 150

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   +   DV+VSNPPYI     + L   V+DF+P  +L GG+ GL  Y    D + + 
Sbjct: 151 PFIEQDIKVDVVVSNPPYIPQKEYEGLSTVVKDFEPYRALVGGVSGLEFYERFMDELPKV 210

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
           L +  + + E+G  Q  DV  + E  K F    V    D  G DR++ 
Sbjct: 211 LKERAIVAFEVGMGQGEDVKALLE--KTFPQSKVEVVLDINGKDRMVF 256


>gi|312622682|ref|YP_004024295.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203149|gb|ADQ46476.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 288

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 24/262 (9%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L ++  +   +VI++    ++  +   + NAI + L+   +        F  + L +  
Sbjct: 37  MLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELYVDE 96

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGV 127
           +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K   F   K   V
Sbjct: 97  NVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCKVFAV 149

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185
           DIS +ALE+A+ NA  NGV  R   ++S+ F  +     FD I+SNPPYI          
Sbjct: 150 DISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAIISNPPYISDE------- 202

Query: 186 EVRDFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           E+ + DPR      I+L    DGL  +R IA+    +L   G    E+G++Q   V  I 
Sbjct: 203 EIFELDPRVLKEPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEIL 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           +      +++ +D    +R + 
Sbjct: 263 KKNGYKNISSRRDLNNVERCIF 284


>gi|312899932|ref|ZP_07759250.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0470]
 gi|311292928|gb|EFQ71484.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0470]
          Length = 277

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S KAL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEKALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|222098800|ref|YP_002532858.1| modification methylase, hemk family [Bacillus cereus Q1]
 gi|221242859|gb|ACM15569.1| modification methylase, HemK family [Bacillus cereus Q1]
          Length = 283

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RI++    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIDRHFNDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++++AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIKVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|154173807|ref|YP_001408445.1| modification methylase HemK [Campylobacter curvus 525.92]
 gi|112802935|gb|EAU00279.1| modification methylase HemK [Campylobacter curvus 525.92]
          Length = 278

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEP 74
           G+S+  + ++  + L D   +F   A+VR   ++E +  I    DFY +  ++      P
Sbjct: 34  GMSAEWIFLNLSADLADESGYF---ALVRRFCEYEPLGYITSKADFYGLNFSVRKGVLIP 90

Query: 75  RPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           RPETE+LVD +L    +LP        R+ ++GTG+G + + +   SP  K    DI+  
Sbjct: 91  RPETEILVDKSLEILVNLP------AARVAEIGTGSGIISICIALNSPA-KITATDINET 143

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFD 191
           AL++A+ NA   GV +R + ++  +   V G FD++VSNPPYI +   +D   L     +
Sbjct: 144 ALDLARENAAKFGVVDRIEFIKCAYLDDVSGEFDLLVSNPPYIAQDYKLDKFVLN----E 199

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P  +L GG+ G    + I         K+  C  E+GY+QK  + +  +    F    ++
Sbjct: 200 PHNALFGGLTGDEILKNIILLARNRRVKNLAC--EMGYDQKSSLEKALKFNG-FEAKFYQ 256

Query: 252 DYGGNDR 258
           D  G DR
Sbjct: 257 DLAGFDR 263


>gi|323490904|ref|ZP_08096099.1| HemK-like protein [Planococcus donghaensis MPA1U2]
 gi|323395384|gb|EGA88235.1| HemK-like protein [Planococcus donghaensis MPA1U2]
          Length = 285

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 11/251 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS   +I      + D Q       I +  K   +  + G  +FY  +  +++D   PR
Sbjct: 37  GLSYSGLIASMRDEISDAQLENFWATIEQHAKGIPVQHLTGTEEFYGRKFRVNADVLIPR 96

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE L++  L      + K+++  + D+GTG+G + + +  E P       DIS  ALE
Sbjct: 97  PETEELIEETLQLIERHLVKKELA-LADIGTGSGIIAITMKCELPHANVTATDISQSALE 155

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A  NA T  ++   D    D    +E   +DVI+SNPPYI       L   VRDF+P  
Sbjct: 156 TAAQNAET--LNAEIDFRLGDLTKPIENEKWDVILSNPPYIAYSEAPDLSDSVRDFEPHH 213

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF---- 250
           +L    +GL+ Y  +A+   + LNK G+   EIGY Q   V ++    K    +AF    
Sbjct: 214 ALFADNEGLALYEKMAEQFPKMLNKPGIIGFEIGYQQGKAVEKML---KDAFPDAFVYCK 270

Query: 251 KDYGGNDRVLL 261
           KD   NDR++ 
Sbjct: 271 KDINKNDRMVF 281


>gi|295397092|ref|ZP_06807204.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC
           11563]
 gi|294974684|gb|EFG50399.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC
           11563]
          Length = 292

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 105/221 (47%), Gaps = 21/221 (9%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGT 108
             I+G   FY     +S  T  PR ETE LV    ++    I+K  +    R+LD+GTGT
Sbjct: 73  QYIVGKAWFYGETFKVSPATLIPRQETEDLV----SYVADLIKKEHIAKDARVLDIGTGT 128

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           G + + L +  P  +    DIS  AL IA+ NA    V   F     D F  V G  FD+
Sbjct: 129 GIIAVTLKQLFPNLQVTATDISPDALNIARENAADKKVVIDFQL--GDLFKPVLGQEFDL 186

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I+SNPPYI S   D +      ++P ++L    +G   Y  + D +  +L K G    E 
Sbjct: 187 IISNPPYIGSDETDVMSKSTVLYEPDLALFAEENGYQIYWRLFDQIHDYLAKPGYFIGEF 246

Query: 228 GYNQ-------KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           GY Q         D +R+ ++     VN  +DY GNDR+L+
Sbjct: 247 GYQQGQSLLAGAKDRLRMTDAE----VNIIQDYAGNDRILV 283


>gi|206978498|ref|ZP_03239357.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus H3081.97]
 gi|206743288|gb|EDZ54736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus H3081.97]
          Length = 283

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     ++ +
Sbjct: 28  LCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFVNEE 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE L+   L     RI++    + + + D+GTG+GA+ + L  E+       V
Sbjct: 88  VLIPRPETEELIVGVLE----RIDRHFNDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +++++AK NA T G    F    L S ++ + + L DV+VSNPPYI       L  
Sbjct: 144 DIAQESIKVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVVVSNPPYIPEEDWRGLSP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  
Sbjct: 203 VVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDV-------KGL 255

Query: 246 LVNAFK--------DYGGNDRVLL 261
           L  AF         D  G DR++ 
Sbjct: 256 LQQAFPHAHVEVVFDINGKDRMVF 279


>gi|262277607|ref|ZP_06055400.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [alpha proteobacterium HIMB114]
 gi|262224710|gb|EEY75169.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [alpha proteobacterium HIMB114]
          Length = 284

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 115/224 (51%), Gaps = 10/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I + +  + I +I+  + F+N  L +S     PRPETE+L++         I K+  ++ 
Sbjct: 61  INQRISKKPISKIINQKSFWNFDLDVSKKVLIPRPETEVLIEMVTK----EINKKKNLKF 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160
           LD+G G+G + ++LL++     G G+DIS  A+   K N     +  R   L+ + F   
Sbjct: 117 LDIGCGSGCISISLLEQYKKSVGTGIDISKDAIVNTKINLSNYNLINRIKLLRKNIFIYK 176

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDG-GIDGLSHYRTIADGVSRHL 217
            +  FD+I+SNPPY++  + D + L+  ++ ++P+ +L G   +GL  Y+ I      ++
Sbjct: 177 TDKKFDLIISNPPYLK--LSDYISLDPGIKKYEPKEALIGDNKEGLRFYKEIIKKFKNNI 234

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             +G  + EIG NQ + + ++       +V+ +K      R LL
Sbjct: 235 KLNGYLAFEIGDNQFMQINKLLILNGFIVVSKYKLINNQIRCLL 278


>gi|296126693|ref|YP_003633945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachyspira murdochii DSM 12563]
 gi|296018509|gb|ADG71746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachyspira murdochii DSM 12563]
          Length = 287

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 11/226 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R L +E +  I   ++FY     + S+   PRPETE ++D  L ++    + +D + I
Sbjct: 63  IERRLNYEPLAYITNKKEFYGFDFYVDSNVLIPRPETEEIIDLVLDYT----KDKDNISI 118

Query: 102 LDLGTGTGAVCLALLK----ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSD 156
            D+ +G+G + + L K    ++       ++IS  A EI   NA      E+F + + +D
Sbjct: 119 CDVCSGSGNIAVTLKKLFIEQNKNIDITAIEISNGAAEITNKNAFNILGDEKFINIINAD 178

Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               + E  FD+IVSN PY+     D L  ++ DF+P  +L  G DGL  YR   + +  
Sbjct: 179 ALKYIPEKKFDIIVSNAPYVPLKDKDSLQKDL-DFEPFNALYSGDDGLDFYRAFLNIIDI 237

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +L  +G    EIGYNQ   ++ I  +  +      KD  G DR L+
Sbjct: 238 YLKDNGAFFFEIGYNQAYSLIDICSNLNINNTEVKKDLNGKDRFLV 283


>gi|257791637|ref|YP_003182243.1| modification methylase, HemK family [Eggerthella lenta DSM 2243]
 gi|257475534|gb|ACV55854.1| modification methylase, HemK family [Eggerthella lenta DSM 2243]
          Length = 345

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 125/310 (40%), Gaps = 57/310 (18%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 30  AQWLLSEATGLSRIELYANFEQPLSMEERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89

Query: 67  LSSDTFEPRPETELLVDSAL---------------------------------------- 86
           +      PRPETE+LV  AL                                        
Sbjct: 90  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWPEDDLPPVPWPEGEAGEQRPERTAD 149

Query: 87  ------------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
                       A   P  E  +++ + DL TG+G +  ++  E P  + V  DI  +A+
Sbjct: 150 QGVAEDESTPAVASGEPAPEPPELL-VADLCTGSGCIACSVAYEHPLARVVATDIVPEAV 208

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F
Sbjct: 209 ALARDNVAALELGDRVEVLSCDLGEGVDPTLMGAFDLVVSNPPYVPTAVMDDIPREVAEF 268

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V   
Sbjct: 269 EPALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLDEAARLAEEAGFSDVRVT 328

Query: 251 KDYGGNDRVL 260
            D  G  RVL
Sbjct: 329 ADLAGRPRVL 338


>gi|118594304|ref|ZP_01551651.1| modification methylase, HemK family protein [Methylophilales
           bacterium HTCC2181]
 gi|118440082|gb|EAV46709.1| modification methylase, HemK family protein [Methylophilales
           bacterium HTCC2181]
          Length = 283

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 12/206 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W DFY     ++  T  PR +TEL++D  +  +    ++   ++ILDLGTG+G + L L 
Sbjct: 81  W-DFYGRTYYINQQTLIPRQDTELMIDILIQNN----KEDSSLKILDLGTGSGVIGLTLA 135

Query: 117 KESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
               FF       DIS +A+++AK N   +G+ +    ++S+WF  +  G FDVIVSNPP
Sbjct: 136 HH--FFNAQITLSDISSEAIKVAKINGGNSGL-KNIQFVESNWFEKIPPGKFDVIVSNPP 192

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI          E+ +  P+I+L   + GL     I     ++LNK GL  +E G++Q  
Sbjct: 193 YIPKNDKHLKHPELLE-QPQIALMSELGGLQAITDIVKNAKQYLNKAGLLMIEHGFDQAP 251

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259
            V  IF +     V  ++D     R+
Sbjct: 252 TVKNIFTANTFNNVRQYQDINSRIRI 277


>gi|269128127|ref|YP_003301497.1| modification methylase, HemK family [Thermomonospora curvata DSM
           43183]
 gi|268313085|gb|ACY99459.1| modification methylase, HemK family [Thermomonospora curvata DSM
           43183]
          Length = 286

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 116/238 (48%), Gaps = 10/238 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++   PDS  D   RF+    + R    E +  I G   F  + L
Sbjct: 26  DAEELAAAVHGVKRSELHTVPDSAFD--ARFW--EGVARREAGEPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++V  AL  +L +++ RD + ++DLGTG+GA+ L++++E+P  +  
Sbjct: 82  KVGPGVFIPRPETEVMVGWALE-TLHQMDVRDPL-VVDLGTGSGAIALSIVQEAPSARVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182
            V+    A   A  N     +  R     +D+  +++   G  D+++SNPPYI     + 
Sbjct: 140 AVEKDPTAFVYATRNVEELDLRGRVRLHLADFADALQELNGTVDLVISNPPYIPMSEWEY 199

Query: 183 LGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  EVRD DP  +L  GG DGL   RT+     R L   G  +VE    Q   V  +F
Sbjct: 200 VPPEVRDHDPAAALWGGGDDGLDAIRTVERTARRLLRPGGHVAVEHSDMQGNAVYWVF 257


>gi|313885112|ref|ZP_07818864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619803|gb|EFR31240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 283

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 14/217 (6%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDVVRILD 103
           + + +  +LG  +F      +S  T  PR ET  L+D A+ F   S P        +ILD
Sbjct: 70  QGQPLQYLLGRANFRGTWYQVSLATLIPREETGGLIDLAIKFFGDSAP-------TQILD 122

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162
           +GTGTG + + L K  P  + V  DIS +AL+IA+ NA T  +    D   SD   +V +
Sbjct: 123 IGTGTGILAIELAKVFPQAQVVASDISEEALKIARVNAETMAI--HVDFFLSDVCKTVPK 180

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             + +IVSNPPYI    +D +   V +++P ++L    +GL+ Y+ +A  +   ++K GL
Sbjct: 181 KKYQLIVSNPPYIALDELDLMDPSVINYEPHLALFADQEGLAIYQKLAQELPAFIDKQGL 240

Query: 223 CSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDR 258
             +EIG+ Q   V  IF E+     +   KD+   DR
Sbjct: 241 ILLEIGFRQGQKVAAIFKEAFPQAEITIHKDFYDKDR 277


>gi|312141078|ref|YP_004008414.1| sam dependent methyltransferase [Rhodococcus equi 103S]
 gi|311890417|emb|CBH49735.1| SAM dependent methyltransferase [Rhodococcus equi 103S]
          Length = 268

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 14/200 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +LGW +F   R+ +    F PR  TELLV  A A     +++ DVV  +DL  G+G
Sbjct: 57  PLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAAL----VDQGDVV--VDLCCGSG 110

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTLQSDWFSSVEGLF 165
           A+ +A+  +SP  +    D+   A+  A+ N    G      + FD L  +    + G  
Sbjct: 111 ALGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHEGDLFDALPEE----LRGRV 166

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DV+V+N PY+ S  +  +  E RD +PR +LDGG DGL   R +A+   R L+  G   V
Sbjct: 167 DVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVAEAAPRWLSPGGRLLV 226

Query: 226 EIGYNQKVDVVRIFESRKLF 245
           E   +Q    V IF    L 
Sbjct: 227 ETSIHQASSSVGIFTRAGLL 246


>gi|223039659|ref|ZP_03609945.1| modification methylase HemK [Campylobacter rectus RM3267]
 gi|222879042|gb|EEF14137.1| modification methylase HemK [Campylobacter rectus RM3267]
          Length = 282

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 19/259 (7%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R + + L R  G+    + ++ +  L+D + +F      R   HE +  I G   FY + 
Sbjct: 27  RVAKALLMRQLGVKIEWIFLNLNRELEDSEGYFALAK--RFANHEPLEYITGEVGFYGLS 84

Query: 65  LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             +      PRPETE+LV+ +L    +LP   +  +V  + +G+G  ++CLAL   +   
Sbjct: 85  FNVKKGVLIPRPETEILVEKSLEVLSNLPARNEPPLVAEIGVGSGIISICLALNSSA--- 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K +  DIS  AL +A+ NA   GV +R + ++  +   + G FD++VSNPPYI       
Sbjct: 142 KIIASDISDDALNLARENAAKFGVEDRIEFVKCAYLDQIYGRFDLLVSNPPYIAQ----- 196

Query: 183 LGLEVRDF---DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              E+  F   +P  +L GG  G    + I         K   C  E+GY+QK  +  + 
Sbjct: 197 -DYELDKFVLNEPHEALFGGAAGDEILKNIIFVAKNRGVKYLAC--EMGYDQKASLESVL 253

Query: 240 ESRKLFLVNAFKDYGGNDR 258
           E    F    ++D  G DR
Sbjct: 254 ELSG-FEAEFYRDLAGFDR 271


>gi|256850892|ref|ZP_05556281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 27-2-CHN]
 gi|260661106|ref|ZP_05862020.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 115-3-CHN]
 gi|282934196|ref|ZP_06339474.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|297205769|ref|ZP_06923164.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus jensenii JV-V16]
 gi|256615954|gb|EEU21142.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 27-2-CHN]
 gi|260548043|gb|EEX24019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 115-3-CHN]
 gi|281301810|gb|EFA94076.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|297148895|gb|EFH29193.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus jensenii JV-V16]
          Length = 280

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 124/265 (46%), Gaps = 17/265 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ D    +    GL+  +  +  DS    +    L     +  ++ S   ILG+  F  
Sbjct: 20  SIEDISYLISERAGLTPSEFQLKQDSEASSKLEKQLQKDFKKLARNVSPQYILGYAWFLG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            ++ +      PR ETE LV+ AL          D +RILDLGTG+GA+ +AL KE+   
Sbjct: 80  YKIMVQRGVLIPRFETEELVEWALDHL------HDGMRILDLGTGSGAIMVALAKEASK- 132

Query: 123 KGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           KG+        DIS  AL   + N +T  +       +++    +E  FD+I+SNPPYI 
Sbjct: 133 KGIKDLTLYASDISDSALRTCEENFLTFDLD--VTVRKANVLIGLEK-FDLIISNPPYIR 189

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + +   V   +P  +L GG DGL  YR  A  V  HL  +G   +E G+++K D+ 
Sbjct: 190 PEEKNLMDSNVLQNEPEEALFGGKDGLEFYRRFAKQVREHLTDEGQFFLEFGFSEKDDLA 249

Query: 237 RIF-ESRKLFLVNAFKDYGGNDRVL 260
           ++F E    F V    D  G  R++
Sbjct: 250 KLFTEELPDFKVEFKDDLAGKPRMV 274


>gi|325267685|ref|ZP_08134336.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans
           ATCC 33394]
 gi|324980809|gb|EGC16470.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans
           ATCC 33394]
          Length = 312

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VDIS  ALE+A  N     + ER
Sbjct: 136 PWIEYPELVHRALDLCTGSGCLAIQMAAHYPAAQIDAVDISLDALEVAAVNVEDYSLQER 195

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  VD L  E    +P ++L  G DGL   R I
Sbjct: 196 IQLVHTDLFEGLEGTYDLIVSNPPYVDAESVDALPEEYL-HEPELALGSGEDGLDATREI 254

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 255 LLQAAKFLNPRGVLLVEIGHNRDV 278


>gi|319650893|ref|ZP_08005030.1| modification methylase [Bacillus sp. 2_A_57_CT2]
 gi|317397491|gb|EFV78192.1| modification methylase [Bacillus sp. 2_A_57_CT2]
          Length = 284

 Score = 95.9 bits (237), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 26/262 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           + R + L++ +  ++P+ VLD+ Q+     A+      + +  I+G  +FY     ++ D
Sbjct: 34  MTRASFLANLREDLNPE-VLDEFQK-----AVQSHAAGQPVQYIIGSEEFYGRAFQVNED 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV +AL          + + + D+GTG+GA+ + +  E P       DI 
Sbjct: 88  VLIPRPETEELVYNALQKINKLFGSVNGLEMADIGTGSGAIAVTMKLEKPELNVTATDIY 147

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
              LE+A+ NA  NG     D  Q D      S    FD+I+SNPPYI    ++ +   V
Sbjct: 148 GPTLELAEKNAEQNGA--EIDFYQGDLLQPLISKGKKFDIILSNPPYIPEKDIEWMSDIV 205

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            + +P  +L  G DGL  YR   + +   +    +   E+G  Q        E+  L L 
Sbjct: 206 TEHEPHRALFAGEDGLDLYRRFMEELPAVIKDRAIIGFEVGAGQS-------EAVSLLLK 258

Query: 248 NAFK--------DYGGNDRVLL 261
            AF         D  G DR++ 
Sbjct: 259 QAFPQANVETVYDINGKDRMVF 280


>gi|300814561|ref|ZP_07094815.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511329|gb|EFK38575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 276

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 19/206 (9%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D ++FF    + +S   + +  IL    F   +  ++     PR ETE+ V+        
Sbjct: 53  DEEKFFRILKMRQS--GQPLQYILEETYFMGKKFKINRGVLIPRKETEISVEVITDI--- 107

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI---AKSNAVTN--GV 146
            I+K      L++G G+G V + +         +  +I+C  L+I   A  N  TN   +
Sbjct: 108 -IKKNKCKSFLEIGCGSGIVTIMV--------NLLTNINCSCLDISDLAIENTKTNIKNL 158

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +    +S+ F +VEG FD+I SNPPYI++  +  L  EV++F+P  +LDGG  GL  Y
Sbjct: 159 GAKVQVFKSNLFENVEGKFDIIYSNPPYIKTGEIKNLQDEVKNFEPISALDGGESGLEFY 218

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQK 232
           + I    + +LN +G    EIGY+QK
Sbjct: 219 KKIIKQSTNYLNDNGFLIFEIGYDQK 244


>gi|256390408|ref|YP_003111972.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
 gi|256356634|gb|ACU70131.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
          Length = 303

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 13/239 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PD   D R        I R    E +  I G   F  + L
Sbjct: 46  DAEELAAWVHGVRRTDLHRVPDHDFDAR----YWEVIARRANREPLQHITGAAYFRYLEL 101

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE++V     +++ ++   DV    I+DL TG+GA+ L++ +E P  +
Sbjct: 102 AVGPGVFVPRPETEVMV----GWAIDKLRALDVAEPLIVDLCTGSGAIALSIAQEVPRAR 157

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              V++S  A   A  N   +   ER     +D  +++   +G  DV+VSNPPYI     
Sbjct: 158 VHAVELSEDAYTWASRNIAASEAGERVTLHLADAVTALPELDGRVDVVVSNPPYIPLTEW 217

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           + +  E RD DP ++L  G DGL   R +     R L   G  + E    Q  +V RIF
Sbjct: 218 EYVAPEARDHDPELALFSGPDGLDLIRGLERTAQRLLKPGGWSAFEHSDKQGGEVQRIF 276


>gi|255348386|ref|ZP_05380393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 70]
 gi|255502927|ref|ZP_05381317.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 70s]
          Length = 290

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 99/209 (47%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+       L  EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFELDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           DV +IF ++ +      KDY   DR    
Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271


>gi|325288194|ref|YP_004263984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga lytica DSM 7489]
 gi|324323648|gb|ADY31113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga lytica DSM 7489]
          Length = 283

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 9/240 (3%)

Query: 24  VDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++P+ V+  D+    FL   + +  KH  I  ILG   F  +   ++++   PRPETE L
Sbjct: 44  LEPNYVVTKDEESTLFLV--VDKLKKHIPIQYILGAAHFMGLDFNVNTNVLIPRPETEEL 101

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V    ++ L  +     + ILD+GTG+G + + L K  P  K   +DIS +A+ +AKSNA
Sbjct: 102 V----SWILNEVNVNQEIAILDIGTGSGCIAITLAKNLPKAKVFALDISKEAILVAKSNA 157

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGI 200
             N V+  F         S++  F++IVSNPPY+  +    +   V + +P ++L     
Sbjct: 158 EANNVTVTFLEQNILEEPSLKQKFNIIVSNPPYVRDLEKKEMSANVLEHEPNLALFVSDN 217

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + L  Y+ I +    HL ++G    EI          +        +   KD  GNDR+L
Sbjct: 218 NPLVFYKAITNFSVNHLRENGKLFFEINQYLGEQTKELLVGLNYINIKLKKDMYGNDRML 277


>gi|255975087|ref|ZP_05425673.1| modification methylase HemK [Enterococcus faecalis T2]
 gi|307285598|ref|ZP_07565737.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0860]
 gi|255967959|gb|EET98581.1| modification methylase HemK [Enterococcus faecalis T2]
 gi|306502822|gb|EFM72087.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0860]
          Length = 277

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|199597586|ref|ZP_03211015.1| Methylase of polypeptide chain release factor [Lactobacillus
           rhamnosus HN001]
 gi|199591609|gb|EDY99686.1| Methylase of polypeptide chain release factor [Lactobacillus
           rhamnosus HN001]
          Length = 276

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 12/253 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            + R     S  ++   D + D   R F  + + R    E    I G   F+     ++ 
Sbjct: 30  LMTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P       D+
Sbjct: 89  AVLIPRFETEELVAWVAE------EQTNAQAGLDMGTGSGAIGLTLARQLPQIDMTLSDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S  AL +AK NA    V+  F T  SD F+ + G FD +V+N PYI       +      
Sbjct: 143 SPSALAVAKQNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLR 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F + KL    A
Sbjct: 201 YEPKLALFADHHGLALFERFVTELPQHLNPLGAAYLEFGYHQEPALRQLF-AEKLPQAQA 259

Query: 250 F--KDYGGNDRVL 260
              +D  G+ R++
Sbjct: 260 TFRRDMAGHPRMV 272


>gi|313631913|gb|EFR99058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria seeligeri FSL N1-067]
          Length = 283

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  +  +LD+ TG+G + + L K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTASDISGPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK NA+      RF   D L+S  F      FD++++NPPYI       +   V   +P
Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S    +V   K
Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSMVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|307719605|ref|YP_003875137.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM
           6192]
 gi|306533330|gb|ADN02864.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM
           6192]
          Length = 282

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 120/267 (44%), Gaps = 26/267 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L + +GLS   ++   P+ V  +  R F  + + R L  E +  I G ++FY + 
Sbjct: 26  DALLILSQASGLSKEALLASYPEPVPPETGRTF-ESLLARRLAGEPVSYIRGLKEFYGLT 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP-F 121
             +      PRP+TE+LVD+AL        +RD  +  I D  TGTG + +A+L  +P  
Sbjct: 85  FHVDRRVLVPRPDTEVLVDAALTLI-----RRDPAITHIHDACTGTGCILIAILAHTPRP 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYI-- 175
                 D+S +AL++ + NA     S    T+    +SD  SSV G F +I +NPPY+  
Sbjct: 140 LTASASDVSEEALDVFRENA-----SRLLGTVPPHHRSDLLSSVPGRFHLITANPPYLTE 194

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            E  ++   G      +P ++L  G DGLSH R +      HL   G    E    Q   
Sbjct: 195 EEVAVMKASGWP----EPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADA 250

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           V  ++       V    D  G  R  L
Sbjct: 251 VAELYREAGYTHVRHLPDLAGRRRATL 277


>gi|315148531|gb|EFT92547.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4244]
          Length = 277

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 17/260 (6%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           H       G    Q ++     +   +   L   + + L       +LG  +FY     +
Sbjct: 27  HYVFLERKGWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +
Sbjct: 87  NEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAI 141

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           D+S +AL +AK NA   G    F   + LQ      +    D+++SNPPYI       + 
Sbjct: 142 DLSEEALTVAKQNAQVLGADIEFYHGNGLQPVASEKI----DLLISNPPYISEQEWHLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241
             VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +  +   
Sbjct: 198 ASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYP 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
           +K   +   KD  GNDR+ +
Sbjct: 258 QKTIKIE--KDLSGNDRLAI 275


>gi|229142070|ref|ZP_04270595.1| Protein hemK [Bacillus cereus BDRD-ST26]
 gi|228641359|gb|EEK97665.1| Protein hemK [Bacillus cereus BDRD-ST26]
          Length = 213

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 107/221 (48%), Gaps = 25/221 (11%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGA 110
           ++G   FY     ++ +   PRPETE L+   L     RIE+    + + + D+GTG+GA
Sbjct: 1   MIGHEMFYGRSFFVNEEVLIPRPETEELIVGVLE----RIERHFSDEKIHVADIGTGSGA 56

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI 168
           + + L  E+       VDI+  ++E+AK NA T G    F    L S ++ + + L DV+
Sbjct: 57  ISITLALENKNLHVYTVDIAQGSIEVAKENAKTLGAEVTFYHGDLLSPFYETGQKL-DVV 115

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI       L   V++ +P+ +L GG DGL  YR   + +   L K  + + EIG
Sbjct: 116 VSNPPYIPEEDWRGLSPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIG 175

Query: 229 YNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLL 261
             Q  DV       K  L  AF         D  G DR++ 
Sbjct: 176 IGQGEDV-------KGLLQQAFPHAHVEVVFDINGKDRMVF 209


>gi|268609960|ref|ZP_06143687.1| methyltransferase [Ruminococcus flavefaciens FD-1]
          Length = 282

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 13/211 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG  +FY     LS D   PRP+TE L+++ L     R +     +I DL +G+G 
Sbjct: 68  LQYLLGEWEFYGYPFRLSEDVLIPRPDTETLIENVLEIC--RRKGMRSPKIADLCSGSGC 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ---SDWFSSVEGL 164
           + + L KE P  +   V++S  AL+I K NA  N    R    D L+   +D F  +   
Sbjct: 126 IAITLKKELPLAEVSAVELSGGALDIIKENASLNDADIRIIKGDVLKKETADMFRDM--- 182

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D+IVSNPPY+ +  +  L  EVR ++P ++L GG DGL  YRT+       L   G   
Sbjct: 183 -DIIVSNPPYVTAKEMAELQQEVR-YEPEMALYGGEDGLDFYRTMTALWKYSLADGGWLL 240

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            E G  Q+ DV +I        +   +D  G
Sbjct: 241 YEYGDGQQNDVEKILNDNDFDNITLSRDLAG 271


>gi|315032690|gb|EFT44622.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0017]
 gi|315143715|gb|EFT87731.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2141]
          Length = 277

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 17/260 (6%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           H       G    Q ++     +   +   L   + + L       +LG  +FY     +
Sbjct: 27  HYVFLERKGWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +
Sbjct: 87  NEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAI 141

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           D+S +AL +AK NA   G    F   + LQ      +    D+++SNPPYI       + 
Sbjct: 142 DLSEEALTVAKKNAQVLGADIEFYHGNGLQPVASEKI----DLLISNPPYISEQEWHLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES--- 241
             VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +  +   
Sbjct: 198 ASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYP 257

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
           +K   +   KD  GNDR+ +
Sbjct: 258 QKTIKIE--KDLSGNDRLAI 275


>gi|326427282|gb|EGD72852.1| hypothetical protein PTSG_04580 [Salpingoeca sp. ATCC 50818]
          Length = 301

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 98/182 (53%), Gaps = 16/182 (8%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG  DF +  LT+ S    PRPETE+LVD        ++ ++  +  L++G G+
Sbjct: 80  EPLQYVLGEWDFRDQTLTMRSPVLIPRPETEVLVD----LIQRKLRQQHGLHFLEIGVGS 135

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD---------TLQSDWFS 159
           GA+ L+LL E+P +   G+D+   A+++ + NA   GV++R           T  S  FS
Sbjct: 136 GAISLSLLHENPSWTATGIDLDDAAIQLTQHNASRCGVADRLTLHKQDITTATPSSPCFS 195

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           S  G FD +VSNPPYI    +  L  E+R ++  ++L GG DGL   R I D     +++
Sbjct: 196 S--GPFDFVVSNPPYIRRDEMPKLAPELR-YENDMALCGGEDGLDVTRAILDIAPHIISR 252

Query: 220 DG 221
            G
Sbjct: 253 TG 254


>gi|302536944|ref|ZP_07289286.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
 gi|302445839|gb|EFL17655.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
          Length = 281

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE +VD    +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETESVVD----WAIHAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
              I+DL TG+GA+ LA+ +E P  +   V++S  AL   + NA  + V+  + D L + 
Sbjct: 112 EPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSEDALRWTRKNAEGSRVTVHQGDALTA- 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D+++SNPPYI     + +  E RD DP ++L  G DGL   R I     R 
Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E    Q   V  IF   +
Sbjct: 230 LRPGGIVVIEHADTQGGQVPWIFADER 256


>gi|119964526|ref|YP_946101.1| HemK family modification methylase [Arthrobacter aurescens TC1]
 gi|119951385|gb|ABM10296.1| putative modification methylase, HemK family [Arthrobacter
           aurescens TC1]
          Length = 294

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 1/202 (0%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + + L  + +  I+GW DF   R+++    F PR  TE LV  A   + P   +R 
Sbjct: 69  LNRMVDQRLSGQPLEHIVGWADFCGKRMSVGPGVFVPRRRTEFLVREAAMIAKPLTARRR 128

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            V ++DL  G+GA+  AL       +    DI   A++ A+ N    G +     L    
Sbjct: 129 AV-VVDLCCGSGAIGAALNDLLGSCELHAADIDPAAVQCARRNVEPRGGTVHHGDLYGAL 187

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              + G  D++++N PY+ +  +  +  E R  +PR++LDGG DGL   R IA G ++ L
Sbjct: 188 PRELRGKVDILLANAPYVPTESIGMMPPEARLHEPRVALDGGADGLDVQRRIALGAAQWL 247

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
              G   +E    Q ++  RI 
Sbjct: 248 GPGGAVVMETSGQQALETARIL 269


>gi|78046500|ref|YP_362675.1| protein methyltransferase HemK [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034930|emb|CAJ22575.1| protein methyltransferase HemK [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 286

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S  T  PR +TE+LV+     +L R++     R+
Sbjct: 61  VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEVLVE----LALERLDTVPGRRV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA ++G+    D  Q  WF+ +
Sbjct: 117 ADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGL-RNVDCRQGSWFAPL 175

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL   
Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLKQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPG 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 235 GWLLLEHGWDQGAAVAELLAARGFAAVATHQDLERRDRVTL 275


>gi|257416747|ref|ZP_05593741.1| modification methylase HemK [Enterococcus faecalis AR01/DG]
 gi|257158575|gb|EEU88535.1| modification methylase HemK [Enterococcus faecalis ARO1/DG]
          Length = 277

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGATLQELLNAAYPQKTIKIE--KDLSGNDRL 273


>gi|2576396|gb|AAB82325.1| possible protoporphyrinogen oxidase [Neisseria gonorrhoeae]
          Length = 218

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 89/162 (54%), Gaps = 12/162 (7%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  ILG R+FY +R T++ +   PRPETE LV++ LA  LP     +  R+ D
Sbjct: 66  RRLNGEPVAYILGVREFYGIRFTVNPNVLIPRPETEHLVEAVLA-RLP-----ENGRVWD 119

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           LGTG+GAV + +  E P       DIS  ALE A+ NA   G   R +     WF +   
Sbjct: 120 LGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMP 177

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            E  +D+IVSNPPYIE+        ++R F+P+I+L    DG
Sbjct: 178 SERQWDIIVSNPPYIENGDKHLSQGDLR-FEPQIALTDFSDG 218


>gi|237715307|ref|ZP_04545788.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405148|ref|ZP_06081698.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_22]
 gi|294643552|ref|ZP_06721358.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CC 2a]
 gi|294807059|ref|ZP_06765878.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides xylanisolvens SD CC 1b]
 gi|229444616|gb|EEO50407.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356023|gb|EEZ05113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_22]
 gi|292641127|gb|EFF59339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CC 2a]
 gi|294445758|gb|EFG14406.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 278

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 117/257 (45%), Gaps = 12/257 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++S  
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVASGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  +    DIS 
Sbjct: 90  LIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISE 143

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N        RF   D L  DW       FDVIVSNPPY+     + +   V 
Sbjct: 144 EALAIARKNNDALEARVRFLQRDVLADDWEKIPS--FDVIVSNPPYVTETEKNEMDANVL 201

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  +   V
Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G DR++   R
Sbjct: 262 RVIKDIFGKDRIVTANR 278


>gi|256763196|ref|ZP_05503776.1| modification methylase HemK [Enterococcus faecalis T3]
 gi|256853869|ref|ZP_05559234.1| hemK protein [Enterococcus faecalis T8]
 gi|307290430|ref|ZP_07570345.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0411]
 gi|256684447|gb|EEU24142.1| modification methylase HemK [Enterococcus faecalis T3]
 gi|256710812|gb|EEU25855.1| hemK protein [Enterococcus faecalis T8]
 gi|306498623|gb|EFM68125.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0411]
 gi|315030388|gb|EFT42320.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4000]
 gi|315150060|gb|EFT94076.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0012]
          Length = 277

 Score = 95.5 bits (236), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|225156035|ref|ZP_03724518.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutaceae bacterium TAV2]
 gi|224803268|gb|EEG21508.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutaceae bacterium TAV2]
          Length = 338

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 109/280 (38%), Gaps = 54/280 (19%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +    GL   Q+ +  +  L + +   +   + R    E +  ILG  ++  + L
Sbjct: 26  DAEWLVGHALGLKRMQLYMQFERPLKESELDLIRPLVRRRGAREPLQHILGTVEWCGLTL 85

Query: 66  TLSSDTFEPRPETELLVDSALAF--------------------SLPRIEKRDVVRILDLG 105
                   PRPETE LV+  +A                     S P        RILDLG
Sbjct: 86  KTDRRALIPRPETEYLVELIIAKLHPSRASISSTASDVGRSAQSAPPPSVAAPSRILDLG 145

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------ 159
           TGTGA+ LAL    P      +D S  AL +A+ NA    +  R   ++S+WFS      
Sbjct: 146 TGTGAIALALATHFPKAAVTALDASDDALALARENAAALALDARVTFVKSNWFSALPPPP 205

Query: 160 ----------------------------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                                       S   LFD+IVSNPPY+          EVR  D
Sbjct: 206 PPAATDTDISSTALDVGRSTLDVGRSAQSAAPLFDLIVSNPPYLTDAEAAAAEPEVRLHD 265

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PR +L    DGL+  RT+ D     L   GL ++E G  Q
Sbjct: 266 PRSALVAPDDGLADLRTLIDQARARLVPGGLLALETGPTQ 305


>gi|294777681|ref|ZP_06743132.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides vulgatus PC510]
 gi|319640267|ref|ZP_07994992.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
 gi|294448749|gb|EFG17298.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides vulgatus PC510]
 gi|317388042|gb|EFV68896.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
          Length = 278

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V G+S  ++    D+     +R  L + +VR  K E I  I+G  +FY +   ++ 
Sbjct: 28  LLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPET  LVD  +     R  K   VRILD+GTG+G + ++L K     + V  D+
Sbjct: 88  HVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVSWDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S K L++A+ N   NGV    +       S     FDVIVSNPPYI       +   V +
Sbjct: 143 SEKVLQVAERNCRRNGVRVTLEQRDVLLASPAGERFDVIVSNPPYITEKERADMSANVLE 202

Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L    D  L  YR IA+     L   G    EI      + V +    +   + 
Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYKNIE 262

Query: 249 AFKDYGGNDRVL 260
             KD   NDR++
Sbjct: 263 LRKDLFQNDRMI 274


>gi|258508167|ref|YP_003170918.1| modification methylase HemK [Lactobacillus rhamnosus GG]
 gi|257148094|emb|CAR87067.1| Modification methylase HemK protein [Lactobacillus rhamnosus GG]
          Length = 276

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 12/252 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           + R     S  ++   D + D   R F  + + R    E    I G   F+     ++  
Sbjct: 31  MTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTPA 89

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P       ++S
Sbjct: 90  VLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSEVS 143

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL +AK NA    V+  F T  SD F+ + G FD +V+N PYI       +      +
Sbjct: 144 PSALAVAKHNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLRY 201

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F + KL    A 
Sbjct: 202 EPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLF-AEKLPQAQAT 260

Query: 251 --KDYGGNDRVL 260
             +D  G+ R++
Sbjct: 261 FRRDMAGHPRMV 272


>gi|297202391|ref|ZP_06919788.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
 gi|197710088|gb|EDY54122.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
          Length = 281

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 15/214 (7%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R++ T  I R  + E +  I G   F  + L +    F PRPETE    S + +++  + 
Sbjct: 53  RYWET--IARREQREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVR 106

Query: 95  KRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
             DVV   I+DL TG+GA+ LAL +E P  +   V++S +AL   + N   +    R D 
Sbjct: 107 AMDVVEPCIVDLCTGSGAIALALAQEVPRSRVHAVELSEEALRWTRKNVEGS----RVDL 162

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            Q    D F  ++G  D+++SNPPYI     + +  E RD+DP ++L  G DGL   R +
Sbjct: 163 RQGNALDAFRDLDGHVDLVISNPPYIPLTEWEYVAPEARDYDPELALFSGEDGLDLIRGL 222

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                R L   G+  +E    Q   V  IF   +
Sbjct: 223 ERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEER 256


>gi|315168547|gb|EFU12564.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1341]
          Length = 277

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|257087540|ref|ZP_05581901.1| modification methylase HemK [Enterococcus faecalis D6]
 gi|256995570|gb|EEU82872.1| modification methylase HemK [Enterococcus faecalis D6]
 gi|315025303|gb|EFT37235.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2137]
          Length = 277

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAVYPQKTIKIE--KDLSGNDRL 273


>gi|227519761|ref|ZP_03949810.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX0104]
 gi|227072849|gb|EEI10812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX0104]
          Length = 277

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVTSEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|256616930|ref|ZP_05473776.1| modification methylase HemK [Enterococcus faecalis ATCC 4200]
 gi|307276805|ref|ZP_07557916.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2134]
 gi|256596457|gb|EEU15633.1| modification methylase HemK [Enterococcus faecalis ATCC 4200]
 gi|306506442|gb|EFM75601.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2134]
          Length = 277

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAV 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   + ++  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQKLLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|156398472|ref|XP_001638212.1| predicted protein [Nematostella vectensis]
 gi|156225331|gb|EDO46149.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 10/210 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E I  I+G  DF  + L + +    PRPETE LV+      +    K      LD+G+G+
Sbjct: 7   EPIQYIVGDWDFRFLTLQMQAPVLIPRPETEQLVEL-----INNHLKSSTFAFLDVGSGS 61

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFD 166
           GA+CL+LL E+    GV +D+S  A+++ + NA   G++ R +         +     FD
Sbjct: 62  GAICLSLLSENEKASGVAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELNMTLKKFD 121

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI    +  L  EV  ++ R +L GG DG+   R I     + LN++G   +E
Sbjct: 122 MIVSNPPYIPEHDMTLLQPEVASYEDRQALCGGKDGMDVIRQILAAAPQLLNRNGSIWLE 181

Query: 227 IGYNQKVDVVRIFESR---KLFLVNAFKDY 253
                   V    ESR    L L + +KD+
Sbjct: 182 TDLTHPPLVRDWLESRGHLGLTLHSVYKDF 211


>gi|259649484|dbj|BAI41646.1| methylase [Lactobacillus rhamnosus GG]
          Length = 261

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 114/252 (45%), Gaps = 12/252 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           + R     S  ++   D + D   R F  + + R    E    I G   F+     ++  
Sbjct: 16  MTRADWTPSQLILHRQDPMPDAAWRQFQAD-VARLANFEPAQYITGQAPFFGTMFAVTPA 74

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P       ++S
Sbjct: 75  VLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSEVS 128

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL +AK NA    V+  F T  SD F+ + G FD +V+N PYI       +      +
Sbjct: 129 PSALAVAKHNAAAQKVNVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEETSVMDQSTLRY 186

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F + KL    A 
Sbjct: 187 EPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLF-AEKLPQAQAT 245

Query: 251 --KDYGGNDRVL 260
             +D  G+ R++
Sbjct: 246 FRRDMAGHPRMV 257


>gi|254387522|ref|ZP_05002761.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294815091|ref|ZP_06773734.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|326443453|ref|ZP_08218187.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces clavuligerus ATCC 27064]
 gi|197701248|gb|EDY47060.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294327690|gb|EFG09333.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
          Length = 281

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 7/202 (3%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I+DL TG+GA+ LA+ +E P  +   V++S  AL+ A+ NA  + V+       +  
Sbjct: 112 EPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSENALDWARKNAEGSRVTVHHGNALTA- 170

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              ++G  D+++SNPPYI     + +  E RD DP ++L  G DGL   R I     R L
Sbjct: 171 LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLL 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
              GL  +E    Q   V  IF
Sbjct: 231 RPGGLVVIEHADTQGGQVPWIF 252


>gi|290957364|ref|YP_003488546.1| methylase [Streptomyces scabiei 87.22]
 gi|260646890|emb|CBG69987.1| putative methylase [Streptomyces scabiei 87.22]
          Length = 281

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 13/207 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100
           I R  + E +  I G   F  + L +    F PRPETE    S + +++  +   DVV  
Sbjct: 58  IARREQREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEP 113

Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156
            I+DL TG+GA+ LAL +E P  +   V++S  AL   + N   +    R D  Q    D
Sbjct: 114 LIVDLCTGSGAIALALAQEVPRSRVHAVELSEDALTWTRKNMAGS----RVDLRQGNALD 169

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F  ++G  D++VSNPPYI     + +  E RD+DP ++L  G DGL   R +     R 
Sbjct: 170 AFRDLDGQVDLVVSNPPYIPLTEWEYVAPEARDYDPELALFSGEDGLELIRGLERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E    Q   V  IF   +
Sbjct: 230 LRPGGVVVIEHADTQGGQVPWIFTEER 256


>gi|55980410|ref|YP_143707.1| HemK family methyltransferase [Thermus thermophilus HB8]
 gi|55771823|dbj|BAD70264.1| methyltransferase, HemK family [Thermus thermophilus HB8]
          Length = 500

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 9/219 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L+   +  ++G  +F+ + L +      PRPETE LV+ AL   LP        RI
Sbjct: 67  LKRRLQGYPLQYLVGEVEFFGLPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRI 121

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTGTGA+ LAL +  P  +    ++  KAL +A+ NA   G+S  F  L +     +
Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALARENAERLGLSVAF--LPAPLTGGL 179

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             L D++VSNPPY+     +    E+  ++  ++L  G +GLS  R +A+   R L   G
Sbjct: 180 RDL-DLVVSNPPYLPEAYREKAPREL-GYESPLALYAGPEGLSVARPLAEEARRSLKPGG 237

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +E+       + R    +    V    D  G DR L
Sbjct: 238 YLLLELAPENVHLLARELREKGWKEVAVLPDLAGRDRYL 276


>gi|189218442|ref|YP_001939083.1| methylase of polypeptide chain release factors [Methylacidiphilum
           infernorum V4]
 gi|189185300|gb|ACD82485.1| Methylase of polypeptide chain release factors [Methylacidiphilum
           infernorum V4]
          Length = 279

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 15/227 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   I R    E +  ILG+  FY  ++ +S     PRPETE +V++A+   L RI   
Sbjct: 57  LLWKRIERRATGEPLDYILGFSPFYGGKILVSPAVLIPRPETEYVVEAAINL-LSRIPGP 115

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQ 154
               ILD+GTG+GA+ + L K  P     G DIS +ALE+A+ N   + N    + D L 
Sbjct: 116 ----ILDVGTGSGAIVVTLAKLFPDRSFYGSDISEEALEVARKNGKDLANLYFYKDDLLN 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                     F++IV+N PYI S  +  L  E++ F+P I+LDGG +GL     I   + 
Sbjct: 172 DPPLD----FFELIVANLPYIPSETLPRLSAEIQ-FEPAIALDGGKEGL---ELIKKFIG 223

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +  N+   C +EIG  Q   V +    +   ++   KD    +RV++
Sbjct: 224 QAKNRCRYCILEIGDGQFSKVSQFLHEQGFSIIEVKKDLSQMERVIV 270


>gi|255038065|ref|YP_003088686.1| modification methylase, HemK family [Dyadobacter fermentans DSM
           18053]
 gi|254950821|gb|ACT95521.1| modification methylase, HemK family [Dyadobacter fermentans DSM
           18053]
          Length = 286

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 107/228 (46%), Gaps = 16/228 (7%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           N I R   +E +  I+G  +F  +   +SS    PRPETE LV      +    E    +
Sbjct: 59  NIIKRLNNNEPVQHIIGSTEFCGLEFRVSSAVLIPRPETEELVQMV---TRDYAEPDKNI 115

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD 156
            ILD+GTG+G + + L +  P       D+S +ALE+A+ NA   + +    + D L   
Sbjct: 116 SILDIGTGSGCIAIVLARFLPHVSVHAWDVSDEALEVARENARQLIADVTFAKQDMLNVA 175

Query: 157 WFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIA 210
           +   + G    FD +VSNPPY+     + +   V  F+P  +L   D   D L  Y+ IA
Sbjct: 176 F--PLPGNIVQFDCLVSNPPYVTYSEAESMRPNVLRFEPHEALFVEDN--DPLLFYKAIA 231

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           D  + HL   G C VEI  +   +  ++FE R    V   +D  G DR
Sbjct: 232 DFGTHHLKHGGKCYVEINEHFGAETKQVFEERNYIKVEILRDINGKDR 279


>gi|29829453|ref|NP_824087.1| methyltransferase [Streptomyces avermitilis MA-4680]
 gi|29606561|dbj|BAC70622.1| putative modification methyltransferase [Streptomyces avermitilis
           MA-4680]
          Length = 293

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 13/241 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+ +  D+  D R        I R    E +  I G   F  + L
Sbjct: 38  DAEELAAFVHGVKRGQLHLVKDADFDAR----YWEMIARREAREPLQHITGLAYFRYLEL 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LAL +E P  +
Sbjct: 94  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLIVDLCTGSGAIALALAQEVPRSR 149

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              V++S  AL   + N   + V  R  D L++  F  ++G  D+++SNPPYI     + 
Sbjct: 150 VHAVELSEDALRWTRKNVEGSRVDLRQGDALEA--FPDLDGQVDLVISNPPYIPLTEWEY 207

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF   
Sbjct: 208 VAPEARDHDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEE 267

Query: 243 K 243
           +
Sbjct: 268 R 268


>gi|302549270|ref|ZP_07301612.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
 gi|302466888|gb|EFL29981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
          Length = 270

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 100/211 (47%), Gaps = 15/211 (7%)

Query: 39  TNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           T A+V R +    +  ++GW +F  +R+T++   F PR  TE LV+ ALA    R+ +  
Sbjct: 50  TAAMVERRVAGLPLELVVGWAEFRGLRVTVAPGVFVPRRRTEFLVEQALA----RVPRAT 105

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VV  LDL  G+GAV  AL       +    DI   A+  A+SN    G        Q D 
Sbjct: 106 VV--LDLCCGSGAVGAALASALGRVELHAADIDPAAVRCARSNVAAVG----GHVHQGDL 159

Query: 158 FSSVEGLF----DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F ++ G      D++ +N PY+ S  +  L LE RD +P ++LDGG DGL   R +A   
Sbjct: 160 FDALPGALRGRVDILAANVPYVPSDEIGLLPLEARDHEPLVALDGGADGLDVLRRVAAEA 219

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            R L   G   VE    Q    +  FE   L
Sbjct: 220 PRWLAPGGCVLVETSRLQAPAALTAFEGNGL 250


>gi|315186592|gb|EFU20351.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta thermophila DSM 6578]
          Length = 282

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 120/270 (44%), Gaps = 26/270 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   L   +GL    ++   P+ V  + +R F  + + R L  E +  I G ++FY + 
Sbjct: 26  DALLILSHASGLPKEALLASYPEPVPPETRRTF-ESLLARRLAGEPVSYIRGLKEFYGLT 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP-F 121
             +      PRP+TE+LVD+AL        +RD  +  I D  TGTG + +A+L  +P  
Sbjct: 85  FHVDRRVLVPRPDTEVLVDAALTLI-----RRDPAITHIHDACTGTGCILIAILTHTPRP 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYI-- 175
                 D+S +AL++ + NA     S    T+    +SD  SSV G F +I +NPPY+  
Sbjct: 140 LTASASDVSEEALDVFRENA-----SRLLGTVPPHHRSDLLSSVPGRFHLITANPPYLTE 194

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            E  ++   G      +P ++L  G DGLSH R +      HL   G    E    Q   
Sbjct: 195 EEVAVMKASGWP----EPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADA 250

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V  ++       V    D  G  R  L  R
Sbjct: 251 VAELYREAGYTHVRHLPDLAGRRRATLARR 280


>gi|323219316|gb|EGA03805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
          Length = 199

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 97/174 (55%), Gaps = 7/174 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA  LP        RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSGQQFDMIVSNPPYIDA 189


>gi|326800778|ref|YP_004318597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobacterium sp. 21]
 gi|326551542|gb|ADZ79927.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobacterium sp. 21]
          Length = 286

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 116/251 (46%), Gaps = 10/251 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +++     L+D Q   L +A  R    E +  I+G   F  + L ++     PR
Sbjct: 36  GYSRRDLLLHKSMSLNDEQLDQLEDAASRISAGEPVQYIIGHTPFMGLSLHVNQHVLIPR 95

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L     ++      +++D+GTG+G + +A+ K     +   +D+S +AL 
Sbjct: 96  PETEELVD--LIIQDLKLSNSSESKLIDIGTGSGCIPIAIKKYVNQAQVYALDVSVEALA 153

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +AK NA  N     F   D L+ D   + E  FDVIVSNPPYI +     +   V  F+P
Sbjct: 154 VAKQNAADNQCPVHFMLADILEWDIIFAEEVKFDVIVSNPPYITNSEQKGMHPNVLQFEP 213

Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            ++L   D     L  Y TIA     HL K G    EI  N   +V  +   +    +  
Sbjct: 214 HLALFVEDQA--PLLFYETIAAFALAHLEKGGKLYFEINRNFGQEVKDLLTKKGFKNILL 271

Query: 250 FKDYGGNDRVL 260
            +D  G DR++
Sbjct: 272 KQDIHGADRMV 282


>gi|238022355|ref|ZP_04602781.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147]
 gi|237866969|gb|EEP68011.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147]
          Length = 319

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 92/175 (52%), Gaps = 6/175 (3%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VDIS  ALE+A  N    G+ ER
Sbjct: 143 PWIEYPELVHRALDLCTGSGCLAIQIADHYPAAQVDAVDISLDALEVAAVNVEDYGLQER 202

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 203 VNLIHTDLFEGLEGTYDLIVSNPPYVDAESVAALPNEYL-HEPELALGSGEDGLDATREI 261

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               ++ LN  G+  VEIG+N+        E   ++L  +    GG+  V L  R
Sbjct: 262 LLQAAKFLNPKGVLLVEIGHNRDALEAAYPELPFMWLETS----GGDGFVFLLTR 312


>gi|257453785|ref|ZP_05619063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enhydrobacter aerosaccus SK60]
 gi|257448712|gb|EEV23677.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enhydrobacter aerosaccus SK60]
          Length = 284

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 13/215 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G + F+     ++  T  PRP+TE L+++ L      + K+  + ILDLGTG+G + +
Sbjct: 72  VVGKQSFWQHEFLVNQHTLIPRPDTERLIEAVLNHHKNSLSKQ--MNILDLGTGSGCIAI 129

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG----LFD 166
            L +E        VD S +AL +A  NA   GVS      +  W   F +  G     FD
Sbjct: 130 TLAEEFKNSSVSAVDKSPQALSVATQNAKRIGVS-NIAFFEGSWYEPFMTAHGDESNKFD 188

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI+       GL        I+ + G+  + H   I     + L   GL ++E
Sbjct: 189 IIVSNPPYIDPNDPHLAGLTDEPISALIADNKGMADICH---IVKTAPQFLQPHGLLAIE 245

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G+ Q   V  +F S     V   KDYG N+RV L
Sbjct: 246 HGHEQGEQVRDVFLSNGFDEVITVKDYGNNERVTL 280


>gi|297622632|ref|YP_003704066.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Truepera radiovictrix DSM 17093]
 gi|297163812|gb|ADI13523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Truepera radiovictrix DSM 17093]
          Length = 280

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 106/235 (45%), Gaps = 12/235 (5%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QR  L   + R    E +  ILG   FY + L ++     PRPETE LV+ ALA     +
Sbjct: 54  QRRRLEAWVRRREAREPLQHILGVAPFYGLTLRVTPQVLVPRPETERLVELALAH----L 109

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150
             R    +LD+GTG+GAV LAL  E P    +  D+S  AL +A+ NA   G+  RF   
Sbjct: 110 RGRARPHVLDVGTGSGAVALALQAERPDAVVLASDLSGAALAVARENARRLGLPVRFRRA 169

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           D L      +     +++VSNPPY+     + +  EV   DP  +L  G DGL+ +R + 
Sbjct: 170 DLLADPAVRAFARRAELVVSNPPYLPEGDREAVSPEV-QADPATALYAGPDGLAVFRRLE 228

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLFCR 264
                 L       VE+      +V R + ESR         D  G  R L   R
Sbjct: 229 REAFSALQPGAALFVELDAR---NVARALAESRGWARGAVHDDLVGRPRFLQLVR 280


>gi|256961204|ref|ZP_05565375.1| modification methylase HemK [Enterococcus faecalis Merz96]
 gi|293384153|ref|ZP_06630047.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           R712]
 gi|293386967|ref|ZP_06631536.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           S613]
 gi|312907896|ref|ZP_07766879.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|312978575|ref|ZP_07790313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis DAPTO 516]
 gi|256951700|gb|EEU68332.1| modification methylase HemK [Enterococcus faecalis Merz96]
 gi|291078633|gb|EFE15997.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           R712]
 gi|291083637|gb|EFE20600.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           S613]
 gi|310625987|gb|EFQ09270.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|311288724|gb|EFQ67280.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis DAPTO 516]
          Length = 277

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQVLGADIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|229819783|ref|YP_002881309.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
 gi|229565696|gb|ACQ79547.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
          Length = 296

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 12/249 (4%)

Query: 6   DSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+ + L    G++  +V  +V  D+ L + +R      + R    E +  ILG   F ++
Sbjct: 30  DAETLLASALGVTRAEVRRLVVLDADLPEGRRADFARLVDRRAAREPLQHILGAAPFRHL 89

Query: 64  RLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            L +    F PRPETE++   A+  A  L   + R +V  +DL  G G + LA+  E P 
Sbjct: 90  ELAVGPGVFVPRPETEVVAQVAIDEAERLAVDDARPLV--VDLCCGAGGIALAVDTEVPA 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            + V VD++ +A+ + + N    G      E  D   S+  + ++G  DV+VSNPPYI  
Sbjct: 148 SRVVAVDLAPEAVALTRRNDAAVGTRTMRIEHGDVRDSELLADLDGTVDVVVSNPPYIPP 207

Query: 178 VIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +    EVRD DP ++L  GG+DGL   R +    +R L   GL  +E    Q   V 
Sbjct: 208 -DAEPTEPEVRDHDPDLALYGGGVDGLDVPRAVVLASTRLLRAGGLFVMEHAEVQAAAVR 266

Query: 237 RIFESRKLF 245
            +  +   F
Sbjct: 267 EVVTASGAF 275


>gi|293371695|ref|ZP_06618106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CMC 3f]
 gi|292633392|gb|EFF51962.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CMC 3f]
          Length = 278

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 121/259 (46%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++S  
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVASGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  +    DIS 
Sbjct: 90  LIPRPETAELVELIVE------ESPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISE 143

Query: 132 KALEIAKSN--AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +AL IA+ N  A+  GV  RF   D L  DW       FDVIVSNPPY+     + +   
Sbjct: 144 EALAIARKNNDALEAGV--RFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDAN 199

Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  +  
Sbjct: 200 VLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQYR 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            V   KD  G DR++   R
Sbjct: 260 DVRVIKDIFGKDRIVTANR 278


>gi|257081919|ref|ZP_05576280.1| modification methylase HemK [Enterococcus faecalis E1Sol]
 gi|256989949|gb|EEU77251.1| modification methylase HemK [Enterococcus faecalis E1Sol]
          Length = 277

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAKVLGADIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|295113545|emb|CBL32182.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus sp. 7L76]
 gi|315161811|gb|EFU05828.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0645]
          Length = 277

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRMYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|209522892|ref|ZP_03271449.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arthrospira maxima CS-328]
 gi|209496479|gb|EDZ96777.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arthrospira maxima CS-328]
          Length = 299

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 11/209 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++ WR+F    L +S     PRPETEL++D A   + P     + V   D+GTG+GA+ L
Sbjct: 91  VVHWRNF---TLKVSPAVLIPRPETELIIDIAY-HAAPSAGSGNWV---DMGTGSGAIAL 143

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVS 170
            L    P      VD S  AL IA  NA + G   R    Q  W+    S++G    +V+
Sbjct: 144 GLASVFPEAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWGPLHSLKGKVSGMVA 203

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV  ++P ++LDGG  GL     +     + L   G+  +E+   
Sbjct: 204 NPPYIPSQELPNLQPEVILYEPPLALDGGESGLDSIHHLVQTAPQFLQPGGIWIIEMMAG 263

Query: 231 QKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           Q   V  + ES   +  +    D  G DR
Sbjct: 264 QGEAVTSMLESAGCYRDLKILPDLAGIDR 292


>gi|332669393|ref|YP_004452401.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484]
 gi|332338431|gb|AEE45014.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484]
          Length = 289

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           DD  R  L   +VR +  E + ++LGW +F  +R+ ++   F PR  TE+LV  A+A + 
Sbjct: 58  DDPDR--LETMVVRRVAGEPLEQVLGWAEFCGLRVAVAPTVFVPRRRTEVLVREAVALA- 114

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                R  V ++DL  GTGAV LA++        V VD+   A+++A+ N    G     
Sbjct: 115 ---PARGAV-VVDLCCGTGAVGLAVVSSLVDAVLVAVDVDPAAVQVARRNLDPVGGVALL 170

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             + +   S +EG  DV+ +N PY+ +  V  +  E RD + R++LDGG DGL   R +A
Sbjct: 171 GDVDAPLPSHLEGRVDVLTANAPYVPTDEVRLMPPEARDHEARVALDGGPDGLDVQRRVA 230

Query: 211 DGVSRHLNKDGLCSVEIGYNQ 231
               R L   G   VE    Q
Sbjct: 231 AAAPRWLRPGGHLLVETSGRQ 251


>gi|254382316|ref|ZP_04997676.1| methyltransferase [Streptomyces sp. Mg1]
 gi|194341221|gb|EDX22187.1| methyltransferase [Streptomyces sp. Mg1]
          Length = 281

 Score = 94.7 bits (234), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 9/207 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE +VD    +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETESVVD----WAIHAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
              I+DL +G+GA+ LA+ +E P  +   V++S  AL   + NA  + V+  + D L + 
Sbjct: 112 EPMIVDLCSGSGAIALAMAQEVPRSRVHAVELSEDALRWTRKNAEGSRVTVHQGDALSA- 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D+++SNPPYI     + +  E RD DP ++L  G DGL   R I     R 
Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E    Q   V  IF   +
Sbjct: 230 LRPGGIVVIEHADTQGGQVPWIFAEER 256


>gi|21223721|ref|NP_629500.1| methylase [Streptomyces coelicolor A3(2)]
 gi|256785186|ref|ZP_05523617.1| methylase [Streptomyces lividans TK24]
 gi|289769079|ref|ZP_06528457.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces lividans TK24]
 gi|8568783|emb|CAB94532.1| putative methylase [Streptomyces coelicolor A3(2)]
 gi|289699278|gb|EFD66707.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces lividans TK24]
          Length = 281

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 17/243 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++   PD+  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAYLHGVKRGELHTVPDADFDAR----YWEVVARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LAL +E P  +
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIV 180
              V++S  AL+  + N   +    R D  Q D    F  ++G  D++VSNPPYI     
Sbjct: 138 VHAVELSEDALKWTRRNMEGS----RVDLRQGDALTAFPDLDGQVDLVVSNPPYIPLTEW 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +  E RD DP ++L  G DGL   R +     R L   G+  VE    Q   V  IF 
Sbjct: 194 EYVAPEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFT 253

Query: 241 SRK 243
             +
Sbjct: 254 EER 256


>gi|266618886|ref|ZP_06111824.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Bf]
 gi|263528592|gb|EEZ28359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Bf]
          Length = 283

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   I++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|282882112|ref|ZP_06290753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus lacrimalis 315-B]
 gi|281298142|gb|EFA90597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus lacrimalis 315-B]
          Length = 276

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 21/233 (9%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D ++FF    + +S   + +  IL    F + +  ++     PR ETE+ V+        
Sbjct: 53  DEEKFFQILKMRQS--GQPLQYILKETYFMDKKFKINRGVLIPRKETEISVEVITEV--- 107

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI---AKSNAVTN--GV 146
            ++K      L++G G+G V + +         +  +I+C  L+I   A  N  TN   +
Sbjct: 108 -VKKNKCKSFLEIGCGSGIVTIMV--------NLLTNINCSCLDISDLAIENTKTNIKNL 158

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +    +S+ F +V G FD+I SNPPYI++  +  L  EV++F+P  +LDGG  GL  Y
Sbjct: 159 GAKVQVFKSNLFENVTGKFDIIYSNPPYIKTGEIKNLQDEVKNFEPISALDGGESGLEFY 218

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           + I    + +LN +G    EIGY+QK  +  +    K F +   KD  G  RV
Sbjct: 219 KKIIKQSTNYLNDNGFLIFEIGYDQKDSIENLMS--KDFNIYFIKDLQGYYRV 269


>gi|265753007|ref|ZP_06088576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_33FAA]
 gi|263236193|gb|EEZ21688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_33FAA]
          Length = 278

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   ++ 
Sbjct: 28  LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V  D+
Sbjct: 88  HVLIPRPETGELVDWII-----REHKYGWVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   V +
Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202

Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L    D  L  YR IA+     L   G    EI      + V +        + 
Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262

Query: 249 AFKDYGGNDRVL 260
             KD   NDR++
Sbjct: 263 LRKDLFQNDRMI 274


>gi|294501880|ref|YP_003565580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium QM B1551]
 gi|294351817|gb|ADE72146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium QM B1551]
          Length = 283

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 19/220 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTG 107
           +  ++G  +FY     ++     PRPETE LV   ++    RI+K      + ++D+GTG
Sbjct: 68  VQYLIGTEEFYGRSFIVNEHVLIPRPETEELVYGMIS----RIKKEFQHQPIELVDIGTG 123

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164
           +GA+ + L  E    +    DI+ ++L +AK NA     +  F   D LQ    S+ +  
Sbjct: 124 SGAIAITLALELDRVEVTATDIAIESLSVAKENAQNLDAAVTFIQGDLLQPFLLSNQK-- 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FDVIVSNPPYI +   D L   V+D +P  +L GG DGL  YR   + +      + +  
Sbjct: 182 FDVIVSNPPYIPA--DDELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIG 239

Query: 225 VEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            E+G  Q  DV  + +  K F    V    D  G DR++ 
Sbjct: 240 FEVGAGQTKDVAEMLQ--KTFPTAFVECVYDINGKDRMVF 277


>gi|307721343|ref|YP_003892483.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM
           16294]
 gi|306979436|gb|ADN09471.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM
           16294]
          Length = 276

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 18/261 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   L     +    +I   +S + + Q+  L   + R +K+E +  I     FY
Sbjct: 24  RAAREAQLLLMMHLEVDELWLITHQNSEVKETQQ--LLKWVERRVKNEPLEYITNSVSFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +      PRPETELL+D  +  ++P  +K   +   ++G G+G + + L K    
Sbjct: 82  SEEFYIDEGALIPRPETELLIDEVIK-NVP--DKNSALTFAEVGVGSGIISIMLAKTFKN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K + VDIS KAL++A+ N    G+ E  +         V    D +VSNPPYIE     
Sbjct: 139 SKIIAVDISQKALDVAQKNIEKFGLQECIELRLGSLLEPVHEKIDYLVSNPPYIEE---- 194

Query: 182 CLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             G+E+     ++P+ +L GG+ G    + + D V +   K    S EIGY+Q+ D +R 
Sbjct: 195 --GVELESNLSYEPQNALFGGMVGDEIIKKLLDEVLKQ--KIKFFSCEIGYDQQ-DKIRT 249

Query: 239 FESRKLF-LVNAFKDYGGNDR 258
              +K F  +  +KDY   DR
Sbjct: 250 HIQKKDFKAITFYKDYSSFDR 270


>gi|57234022|ref|YP_181924.1| HemK family modification methylase [Dehalococcoides ethenogenes
           195]
 gi|57224470|gb|AAW39527.1| modification methylase, HemK family [Dehalococcoides ethenogenes
           195]
          Length = 277

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 16/262 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           +A  ++   L    G+S  Q+ ++ +  L  D    +F T  + R L+ E    I G ++
Sbjct: 21  EARLEAEILLRHTLGISRVQLHLELERELHPDKEAAYFQT--LKRRLEGEPSAYITGAKE 78

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKE 118
           FY     +      PRPETE L++ AL     RI +  +   I D+GTG+GA+ + L  E
Sbjct: 79  FYGRAFQVDKRVLIPRPETEHLIEKAL-----RIARSYESPYIADIGTGSGAIAITLALE 133

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DIS +ALE+A++NA    + +R    + D   S+  + D++++N PY+ + 
Sbjct: 134 LKDAYVYATDISAEALEVARNNAAEYRLEKRLMFYRGDLLESLPEMVDILMANLPYVPTA 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVR 237
               L       +P  +LDGG DGL  YR +   +   L   G   +EIG +Q +V    
Sbjct: 194 EAGLL-----KGEPVSALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLANY 248

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           I E      V    DY G  RV
Sbjct: 249 IKEYLPQAAVEISPDYAGIPRV 270


>gi|326328817|ref|ZP_08195153.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
 gi|325953439|gb|EGD45443.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
          Length = 273

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 17/209 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99
           +VR +  E +  ILGW +F  +R+ ++   F PR  + L+V+      L     R  V  
Sbjct: 58  VVRRVAGEPLELILGWAEFCGLRIRVAPGVFVPRQRSGLVVE------LVETTLRGTVAP 111

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSD 156
           ++LDL  GTGA+  A+    P  +    DI   A+E A++N  + G   + + +D L  D
Sbjct: 112 KVLDLCCGTGALGAAVAVRRPDVRMWATDIDPAAVECARANLSSGGQVLLGDLYDPLPHD 171

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   FDVIV+N PY+ S  +  +  E RD +  ++LDGG DGL   R + +   +H
Sbjct: 172 LA------FDVIVANAPYVPSDQIRNMPPEARDHEHHVALDGGADGLDVQRRVIEQAPKH 225

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L   G+  +E G  Q      +  ++ L 
Sbjct: 226 LAPGGVLVIEAGQEQAPVTASLMRAQGLV 254


>gi|313636274|gb|EFS02085.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria seeligeri FSL S4-171]
          Length = 283

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 110/247 (44%), Gaps = 10/247 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++ +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  +  +LD+ TG+G + + L K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTASDISGPALA 149

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IAK NA+      RF   D L+S  F      FD++++NPPYI       +   V   +P
Sbjct: 150 IAKKNALLLNADVRFVETDLLES--FKQNGERFDMVLANPPYISEAEKAEMSDYVLKNEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S     V   K
Sbjct: 208 ALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSYPHSTVVIHK 267

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 268 DINSKDR 274


>gi|257090699|ref|ZP_05585060.1| modification methylase hemK [Enterococcus faecalis CH188]
 gi|312905240|ref|ZP_07764360.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0635]
 gi|256999511|gb|EEU86031.1| modification methylase hemK [Enterococcus faecalis CH188]
 gi|310631477|gb|EFQ14760.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0635]
 gi|315579265|gb|EFU91456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0630]
          Length = 277

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|160885547|ref|ZP_02066550.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
 gi|299147399|ref|ZP_07040464.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_23]
 gi|156109169|gb|EDO10914.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
 gi|298514677|gb|EFI38561.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_23]
          Length = 278

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 12/257 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F      ++S  
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFSGRNFKVASGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E  +   +LD+GTG+G + ++L K+ P       DIS 
Sbjct: 90  LIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWDISE 143

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N        RF   D L  DW       FDVIVSNPPY+     + +   V 
Sbjct: 144 EALAIARKNNEDLEAGVRFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDANVL 201

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  +   V
Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIACLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G DR++   R
Sbjct: 262 RVIKDIFGKDRIVTANR 278


>gi|329939827|ref|ZP_08289128.1| methylase [Streptomyces griseoaurantiacus M045]
 gi|329301397|gb|EGG45292.1| methylase [Streptomyces griseoaurantiacus M045]
          Length = 279

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 108/240 (45%), Gaps = 11/240 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+    D+  D R        + R    E +  I G   F  + L
Sbjct: 24  DAEELAAFVHGVKRGQLHTVKDTDFDAR----YWEVVARREAREPLQHITGRAFFRYLEL 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LAL +E P  +
Sbjct: 80  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              V++S  A E A+ N   + V  R     +  F  ++G  D++VSNPPYI     + +
Sbjct: 136 VHAVELSEDAHEWARKNMEGSRVELRQGNALTA-FPDLDGQVDLVVSNPPYIPLTEWEYV 194

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E RD DP ++L  G DGL   R +     R L   G+  VE    Q   V  IF   K
Sbjct: 195 APEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFAEEK 254


>gi|298482443|ref|ZP_07000629.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. D22]
 gi|295088114|emb|CBK69637.1| HemK family putative methylases [Bacteroides xylanisolvens XB1A]
 gi|298271422|gb|EFI12997.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. D22]
          Length = 278

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 117/257 (45%), Gaps = 12/257 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++S  
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIHGIAEFCGRNFKVASGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  K    DIS 
Sbjct: 90  LIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAKVEAWDISE 143

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N        RF   D L  DW       FDVIVSNPPY+     + +   V 
Sbjct: 144 EALAIARKNNDALEARVRFLQRDVLADDWEKIPS--FDVIVSNPPYVTETEKNEMDANVL 201

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +++P ++L     D L  Y  IA   S  L   G    EI      +   I E  +   V
Sbjct: 202 EWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261

Query: 248 NAFKDYGGNDRVLLFCR 264
              +D  G DR++   R
Sbjct: 262 RVIRDIFGKDRIVTANR 278


>gi|168185913|ref|ZP_02620548.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum C str. Eklund]
 gi|169296020|gb|EDS78153.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum C str. Eklund]
          Length = 292

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 7/212 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  +F  +  T+      PR +TE+LV+  +      I+     +I D+  G+GA
Sbjct: 70  VKYILGECEFMGLNFTIKEGVLIPRADTEILVEEVI----KEIKNNGYTKICDVCCGSGA 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDV 167
           + +++ K          DIS  A+E+   N     + +R    +SD  +  +     F++
Sbjct: 126 IGVSIGKYIENSIVDCYDISDIAIEVTNKNINRFLLEDRVKVRKSDLLTVAKEENKKFNI 185

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI+  ++  L  +V+ F+P I+L GG DGL  Y+ I +   + L +DGL + EI
Sbjct: 186 IVSNPPYIKEKVIPTLMDDVKKFEPYIALCGGADGLDFYKKIINQSLQLLEEDGLLAFEI 245

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           GY+Q  +V  +        V    D  G +RV
Sbjct: 246 GYDQGEEVKELLIKNGFSCVRVINDLAGLNRV 277


>gi|212695384|ref|ZP_03303512.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
 gi|212662019|gb|EEB22593.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
          Length = 278

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   ++ 
Sbjct: 28  LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V  D+
Sbjct: 88  HVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   V +
Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202

Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L    D  L  YR IA+     L   G    EI      + V +        + 
Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262

Query: 249 AFKDYGGNDRVL 260
             KD   NDR++
Sbjct: 263 LRKDLFQNDRMI 274


>gi|297192052|ref|ZP_06909450.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719498|gb|EDY63406.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 281

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 9/203 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIEAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
              I+DL +G+GA+ LA+ +E P  +   V++S  AL+  + NA  + V+    D L + 
Sbjct: 112 EPLIVDLCSGSGAIALAMAQEVPRSRVHAVELSEDALKWTRKNAEGSRVTVHHGDALTA- 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D+++SNPPYI     + +  E RD DP+++L  G DGL   R I     R 
Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIF 239
           L   GL  +E    Q   V  IF
Sbjct: 230 LRPGGLVVIEHADTQGGQVPWIF 252


>gi|29377041|ref|NP_816195.1| hemK protein [Enterococcus faecalis V583]
 gi|227554051|ref|ZP_03984098.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis HH22]
 gi|257419964|ref|ZP_05596958.1| modification methylase hemK [Enterococcus faecalis T11]
 gi|29344507|gb|AAO82265.1| hemK protein [Enterococcus faecalis V583]
 gi|227176799|gb|EEI57771.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis HH22]
 gi|257161792|gb|EEU91752.1| modification methylase hemK [Enterococcus faecalis T11]
 gi|315574711|gb|EFU86902.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0309B]
 gi|315580977|gb|EFU93168.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0309A]
          Length = 277

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTGA+ +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGAIAV 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAQALGAGIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWYLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|237711579|ref|ZP_04542060.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725968|ref|ZP_04556449.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229435776|gb|EEO45853.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454274|gb|EEO59995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 278

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 116/252 (46%), Gaps = 6/252 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   ++ 
Sbjct: 28  LLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFEVNK 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V  D+
Sbjct: 88  HVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVSWDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   V +
Sbjct: 143 SEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSANVLE 202

Query: 190 FDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L    D  L  YR IA+     L   G    EI      + V +        + 
Sbjct: 203 WEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYKNIE 262

Query: 249 AFKDYGGNDRVL 260
             KD   NDR++
Sbjct: 263 LRKDLFQNDRMI 274


>gi|270308381|ref|YP_003330439.1| modification methylase, HemK family [Dehalococcoides sp. VS]
 gi|270154273|gb|ACZ62111.1| modification methylase, HemK family [Dehalococcoides sp. VS]
          Length = 277

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 14/226 (6%)

Query: 40  NAIVRSLKH--ESIHR--ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
            A  ++LKH  E +    I G ++FY     +      PRPETE L++ AL  +      
Sbjct: 55  TAYFQTLKHRLEGVPSAYITGEKEFYGRTFQVDKRVLIPRPETEHLIEKALRIA----RS 110

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   I D+GTG+GA+ + L  E         DIS +ALEIA++NA    + +R    + 
Sbjct: 111 YESPYIADIGTGSGAIAITLALELKDAYVYATDISAEALEIARNNAAEYRLGKRLTFYRG 170

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D   S+  + D++ +N PY+ +     L       +P ++LDGG DGL  YR +   +  
Sbjct: 171 DLLESLPEMVDILTANLPYVPTTETKLL-----KGEPLLALDGGADGLDIYRRLIPVLPG 225

Query: 216 HLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            L   G   +EIG +Q +V    I E      V    DY G  RV+
Sbjct: 226 KLRPGGTALLEIGIHQSEVLAKYIKEYLPQAAVEISPDYAGIPRVV 271


>gi|325914285|ref|ZP_08176635.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539540|gb|EGD11186.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 284

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 7/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S+ T  PR +TE LV+     +L R++     R+
Sbjct: 61  VQRRQAGEPVAYLTGSRGFWTLDLAVSTATLIPRADTEALVE----LALERLDHAPGRRV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLG G+GA+ LA+  E P  + +  D S  AL IA+ NA ++G+S         WF+ +
Sbjct: 117 ADLGAGSGAIALAIASERPQAQVIATDASAAALAIAQRNADSHGLSN-VHCRHGSWFAPL 175

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R+I      HL   
Sbjct: 176 AGERFDLIASNPPYIAAGDPHLAQGDLR-YEPASALASGSDGLDDIRSIVADAPAHLRAG 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +        V   +D    +RV L
Sbjct: 235 GWLLLEHGWDQGAAVAELLRRCGFAQVATHQDLEQRERVTL 275


>gi|170759851|ref|YP_001785467.1| HemK family modification methylase [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169406840|gb|ACA55251.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 283

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 119/258 (46%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIEKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI+  +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIKEDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPLEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGRDRVI 278


>gi|332701397|ref|ZP_08421485.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332551546|gb|EGJ48590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 288

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 8/217 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K E +  I G R+FY +   +      PRPETE +++       P       +R  DLGT
Sbjct: 68  KGEPLAYIRGQREFYGLEFIVRPGVLIPRPETEGIIEEVRRLYDPD----SCLRFADLGT 123

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL 164
           G+GA+ + +    P  +G+ VD S  AL  A+ NA+ + V  R   ++ D+ S++     
Sbjct: 124 GSGALGVTMGVVFPRARGLLVDTSDVALRTARENALRHKVDSRVSVVKGDFMSALFRPRS 183

Query: 165 FDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + I+SNPPYI ES + D +   V  ++PR +L  G  GL  Y  +A      L   G  
Sbjct: 184 LECIISNPPYIGESDLAD-VEPAVLAWEPRSALIAGRSGLEAYPALAVRAWDALLPGGHM 242

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +E+G++Q   +VRI        +   +D  G+DR++
Sbjct: 243 LLEMGWSQGSHLVRILRDVGFCSIRVLQDLAGHDRIV 279


>gi|302558380|ref|ZP_07310722.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
 gi|302475998|gb|EFL39091.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
          Length = 281

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 11/236 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHAVKDSDFDAR----YWEVIARREAREPLQHITGHAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   I+DL TG+GA+ LAL +E P  +
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPCIVDLCTGSGAIALALAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              V++S  AL   + N   + V  R     +  F  ++G  D++++NPPYI     + +
Sbjct: 138 VYAVELSEDALRWTRKNMEGSRVELRQGNALTA-FPDLDGQVDLVITNPPYIPLTEWEYV 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             E RD+DP+++L  G DGL   R +     R L   G+  VE    Q   V  IF
Sbjct: 197 APEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIF 252


>gi|270006518|gb|EFA02966.1| hypothetical protein TcasGA2_TC030615 [Tribolium castaneum]
          Length = 264

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 91/180 (50%), Gaps = 26/180 (14%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG   F  + L +S   F PRPETE LVD  L      I++++    L+L  G+GA
Sbjct: 66  VQYVLGECYFRQLVLKMSPPVFIPRPETEQLVDIVLG----EIDRKNCRHFLELCCGSGA 121

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDV 167
           + L+LL+E P  KG  +D S  A  + K NA   G+++R   +QS    W    +  FD+
Sbjct: 122 IALSLLQERPQIKGTALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEK--FDI 179

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPY              D     +LDGG+DGL   + I +  S  LN +G   +E+
Sbjct: 180 IVSNPPY--------------DLQ---ALDGGVDGLKVIKQILELSSECLNMNGKLFLEV 222


>gi|254805411|ref|YP_003083632.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha14]
 gi|254668953|emb|CBA07226.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha14]
          Length = 303

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|313681984|ref|YP_004059722.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154844|gb|ADR33522.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfuricurvum kujiense DSM 16994]
          Length = 274

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 9/199 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY+    +      PRPETE LVD  L+    R+   DV+ I+++G G+G + + L    
Sbjct: 79  FYSREFYIDEGALIPRPETEHLVDEVLS----RVPADDVITIVEVGIGSGIISILLALHL 134

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  + + VDIS KAL +A+ N    G+S+R +  + D  S ++   D++VSNPPYI    
Sbjct: 135 PQARLIAVDISPKALAVARRNIEAFGLSDRIELREGDLLSCIDEKIDLLVSNPPYIAH-- 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D        ++P+ +L GG  G    + + D V +   +  + + E+GY+Q++ V    
Sbjct: 193 -DAPLESNLSYEPQNALFGGDVGDEIIQRLLDEVYKR--RIPMFACEMGYDQRIKVQEYL 249

Query: 240 ESRKLFLVNAFKDYGGNDR 258
           +S  +  ++ + DY   DR
Sbjct: 250 KSFAVQSLDFYTDYASFDR 268


>gi|239928893|ref|ZP_04685846.1| methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291437220|ref|ZP_06576610.1| methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291340115|gb|EFE67071.1| methylase [Streptomyces ghanaensis ATCC 14672]
          Length = 281

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 110/236 (46%), Gaps = 11/236 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHTVKDSDFDAR----YWEVIARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE +V+    +++  +   DVV  RI+DL TG+GA+ LAL +E P  +
Sbjct: 82  QVGPGVFVPRPETESVVE----WAIDAVRAMDVVEPRIVDLCTGSGAIALALAQEVPRSR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              V++S  AL   + N   + V  R     +  F  ++G  D+++SNPPYI     + +
Sbjct: 138 VHAVELSEDALVWTRRNMDGSRVELRQGNALTA-FPDLDGQVDLVISNPPYIPLTEWEYV 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             E RD+DP+++L  G DGL   R +     R L   G+  VE    Q   V  IF
Sbjct: 197 APEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIF 252


>gi|325294566|ref|YP_004281080.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065014|gb|ADY73021.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 288

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R  K E +  + G ++F+     +      PRPETELLV+    +    ++ ++   I
Sbjct: 70  IKRRAKGEPVAYLTGEKEFFGFTFKVQKGVLIPRPETELLVEVVYDY----LKDKEDKTI 125

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +D+GTG+G + L L K      + +G DIS  AL++A  N    G +   + ++ D    
Sbjct: 126 VDVGTGSGCIILTLYKLLGDKHRYIGTDISSIALKVANENKELLGCN-NVEIVKMDLLKE 184

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +    DVIVSNPPYI       L  EV  ++P ++L GG  GL     +    ++ L+ +
Sbjct: 185 INYPVDVIVSNPPYI-PFGDKKLDKEVLKYEPAVALFGGKSGLEIVERLIGESAKKLSSN 243

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G  ++EIG  Q   V ++ E      +   KD  G +RV+
Sbjct: 244 GFFAIEIGKGQSKGVKKLLEKAGFRNIKLHKDLAGVERVI 283


>gi|325103647|ref|YP_004273301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pedobacter saltans DSM 12145]
 gi|324972495|gb|ADY51479.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pedobacter saltans DSM 12145]
          Length = 277

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 12/216 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           + + +I+G  DFY  +  ++     PRPETE LV   + +      K   V +LD+GTG+
Sbjct: 64  KPVQQIIGKADFYGYKFIVNEHVLIPRPETEELVHEIVKY-----HKHQNVSVLDIGTGS 118

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLF 165
             + +++ K  P      +D+S +AL +AK NA+ NGV   F   D L  D  +     F
Sbjct: 119 ACISVSIKKGIPEAIVYAIDVSREALTVAKQNALMNGVDIDFYLDDALNLD--AEKYPFF 176

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           DVIVSNPPYI       +   V  F+P ++L     D L  Y  I+D   + LNK G   
Sbjct: 177 DVIVSNPPYIRESEKKEMHSNVLSFEPHLALFVKDKDPLIFYDKISDFALKRLNKGGFLY 236

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            EI      +   +   R  F     KD   N R+L
Sbjct: 237 FEINQYLAKETEDLIHKRG-FKTLLIKDINSNFRIL 271


>gi|187251501|ref|YP_001875983.1| protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum
           Pei191]
 gi|186971661|gb|ACC98646.1| Protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum
           Pei191]
          Length = 277

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 14/253 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   L  V  LS   V+ + +  +  +D Q++F  + I + L    +  I G +DF   
Sbjct: 26  NAEFLLAHVLNLSRGVVLSNQEREVGAEDAQKYF--DFINKRLLGMPLAYITGTQDFCGH 83

Query: 64  RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              + SD   PRPETE LV+ S+     P+       RILD+ TG+G +  ++  +    
Sbjct: 84  TFIVDSDVLVPRPETEELVEISSSMLGKPK-------RILDMCTGSGCIACSMAMKYRSA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +  GVD S  AL  A+ N    G+ +  + +  D F ++ G FD+I++NPPYI +  +  
Sbjct: 137 QVTGVDNSMAALLTAEKNVKKFGL-QNVELIYGDLFENIYGAFDLIITNPPYIPTGDLAG 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV++ +P+ +LDGG +GL     I       L   GL ++E G N++ ++  +F+  
Sbjct: 196 LSREVKE-EPQAALDGGENGLDIITQIILYAPDFLETGGLLTMEYGINREREIEGLFDKN 254

Query: 243 KLFLVNAFKDYGG 255
               V   KD  G
Sbjct: 255 IWRSVEVKKDMFG 267


>gi|46198381|ref|YP_004048.1| methyltransferase [Thermus thermophilus HB27]
 gi|46196003|gb|AAS80421.1| methyltransferase [Thermus thermophilus HB27]
          Length = 500

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 9/219 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R L+   +  ++G  +F+ + L +      PRPETE LV+ AL   LP        RI
Sbjct: 67  LKRRLQGYPLQYLVGEVEFFGLPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRI 121

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTGTGA+ LAL +  P  +    ++  KAL +A+ NA   G++  F  L +     +
Sbjct: 122 LDVGTGTGAIALALKRALPEAEVYATEVDPKALALARENAERLGLAVVF--LPAPLTGGL 179

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           + L D++VSNPPY+     +    E+  ++  ++L  G +GLS  R +A+   R L   G
Sbjct: 180 KDL-DLVVSNPPYLPEAYREKAPREL-GYESPLALYAGPEGLSVARPLAEEARRSLKPGG 237

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +E+       + R    +    V    D  G DR L
Sbjct: 238 YLLLELAPENVHLLARELREKGWKEVAVLPDLAGRDRYL 276


>gi|152992202|ref|YP_001357923.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1]
 gi|151424063|dbj|BAF71566.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1]
          Length = 282

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 10/232 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + V++D + +   + + R   +E    I+G   FY++ L +      PRPETE+L+D   
Sbjct: 54  NDVMEDPESY--RHLVERRAANEPYEYIVGSASFYDLHLEVEKGVLVPRPETEILIDLVA 111

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 IE+  + RI ++G G+GA+ + L ++ P    V  DIS   +++A+ N  T G+
Sbjct: 112 GI----IEEEKISRIAEIGVGSGAISIVLARKFPELNIVATDISEIPIKVARKNIETFGL 167

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            ++ +  +S+    V+   +++VSNPPYI    +  L   V D++P+ +L GG  G    
Sbjct: 168 EKQIELRRSNLIDEVDERVELVVSNPPYIAEGFL--LESNVVDYEPKEALFGGRVGDELL 225

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + I   V     +   C  E+GY+QK  +    +   +  +  +KD  G DR
Sbjct: 226 KQIILDVKEKGIRWLAC--EMGYDQKEPIASFVKEIGVQSIKFYKDLVGFDR 275


>gi|254431491|ref|ZP_05045194.1| modification methylase, HemK family [Cyanobium sp. PCC 7001]
 gi|197625944|gb|EDY38503.1| modification methylase, HemK family [Cyanobium sp. PCC 7001]
          Length = 289

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 8/213 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  ++G   + +V L +      PR ETELLVD AL         R      DLGTG+
Sbjct: 70  EPLQYLVGLCPWRDVDLQVGPGVLIPRQETELLVDLALELC-----SRPPALWADLGTGS 124

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLF 165
           G + +AL +  P  +G+ VD+S +AL  A +N      + +   LQ  W+  ++   G  
Sbjct: 125 GCLAVALARLWPEAQGLAVDLSAEALNQAGTNLQAFERAGQVRLLQGSWWEPLKPWRGSV 184

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + ++NPPYI + +   L   VRD +PR++L+ G DGL   R +  G +  L   GL  +
Sbjct: 185 QLALANPPYIPTAVWTDLEPVVRDHEPRLALEAGSDGLDAIRAVVAGAATGLAPGGLLLL 244

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           E  ++Q   V  +  +  L  V A +D    +R
Sbjct: 245 EHHHDQSERVSCLLAAAGLIEVQAHRDLENVNR 277


>gi|194016564|ref|ZP_03055178.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus pumilus ATCC 7061]
 gi|194012037|gb|EDW21605.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus pumilus ATCC 7061]
          Length = 294

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%)

Query: 2   QALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD ++    L  V  LS  +++      L + Q    +  + +  K   +  + G  
Sbjct: 21  EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPEEQDRLFSEFVKQHKKGVPVQHLTGIE 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++     PRPETE +V +AL            ++ +D+GTG+GA+ + L  E
Sbjct: 81  FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLQAVDVGTGSGAIAITLALE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYI 175
                    DIS +AL +AK N    G    F  LQ D    +  +G+  D+ +SNPPYI
Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGADVHF--LQGDLLEPIKDQGIKVDLFISNPPYI 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +D L   V   +P  +L  G DGL  Y+ +   +   L+K  +   EIG+ Q  DV
Sbjct: 199 SAEEMDSLSEVVTKHEPVNALTDGRDGLWFYKRLIRDLHHVLHKQAVVVFEIGHTQGQDV 258

Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVL 260
              + +S     V   KD  G DR +
Sbjct: 259 KALLLQSFPAADVRIVKDINGKDRAV 284


>gi|237793456|ref|YP_002861008.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Ba4 str. 657]
 gi|229261092|gb|ACQ52125.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Ba4 str. 657]
          Length = 283

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   I+  
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIKT 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|295707228|ref|YP_003600303.1| protein-(glutamine-N5) methyltransferase [Bacillus megaterium DSM
           319]
 gi|294804887|gb|ADF41953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium DSM 319]
          Length = 283

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 19/220 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTG 107
           +  ++G  +FY     ++     PRPETE LV   ++    RI+K      + ++D+GTG
Sbjct: 68  VQYLIGTEEFYGRSFIVNEHVLIPRPETEELVYGMIS----RIKKEFQHQPIELVDIGTG 123

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164
           +GA+ + L  E    +    DI+ ++L +AK NA     +  F   D LQ    S+ +  
Sbjct: 124 SGAIAITLALELDRVEVTATDIAIESLSVAKENAQNLDAAVIFTQGDLLQPFLLSNQK-- 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FDVIVSNPPYI +   D L   V+D +P  +L GG DGL  YR   + +      + +  
Sbjct: 182 FDVIVSNPPYIPA--DDELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIG 239

Query: 225 VEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRVLL 261
            E+G  Q  DV  + +  K F    V    D  G DR++ 
Sbjct: 240 FEVGAGQTKDVAEMLQ--KTFPTAFVECVYDINGKDRMVF 277


>gi|297180268|gb|ADI16487.1| methylase of polypeptide chain release factors [uncultured
           bacterium HF4000_05M23]
          Length = 287

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 91/187 (48%), Gaps = 4/187 (2%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           Q   L   + R    E +  I G  +FY  R  +      PRPETE LV  A+ F   R 
Sbjct: 56  QLELLETLVSRRAGREPLQYITGSTEFYRRRFAVDPRVLIPRPETEQLVVQAIEFV--RE 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDT 152
              +  R+ D+ TG+GAV ++L  E P  + V  DIS  AL++A+ NA + G     F+ 
Sbjct: 114 RGIETPRVADICTGSGAVAISLALEMPAAEVVATDISAGALDVARHNAGSLGAEVGFFEG 173

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              D      G FDVIVSNPPYI    +  L  EV   +P ++LDGG DGL   R +  G
Sbjct: 174 ELLDPLLDGHGRFDVIVSNPPYILRGAMPGLQAEVAR-EPSLALDGGDDGLDVIRPLFVG 232

Query: 213 VSRHLNK 219
           +   L  
Sbjct: 233 ILEKLKP 239


>gi|293602160|ref|ZP_06684611.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC
           43553]
 gi|292819430|gb|EFF78460.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC
           43553]
          Length = 276

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 117/227 (51%), Gaps = 23/227 (10%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRD 97
           + R L  E +  +LG R+F   R  ++ D   PRP+TE+LV++AL    A + P      
Sbjct: 55  LARRLAGEPMAYLLGHREFVGHRFLVTPDVLIPRPDTEVLVETALECVAAIAGP------ 108

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDLGTG+GA+ +++       + +  D+S  AL++A +NA     S RF  ++  W
Sbjct: 109 --AVLDLGTGSGAIAISIALARRDARVMASDLSAAALKVAAANAWELTASVRF--VEGSW 164

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADG 212
           F +V   EG FD+IVSNPPY+ S   D   L+  D  F+PR +L  G  GL     I  G
Sbjct: 165 FDAVPAGEG-FDLIVSNPPYVAS---DDPHLDQGDLRFEPRGALTDGAGGLEDLARIVAG 220

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
             RHL   G   +E G++Q   V  +  S     V++  D  G +R+
Sbjct: 221 AGRHLKPGGALWMEHGWDQAQAVRELLTSAGFDNVHSRHDLAGIERI 267


>gi|255018346|ref|ZP_05290472.1| hypothetical protein LmonF_12686 [Listeria monocytogenes FSL
           F2-515]
          Length = 195

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 91/187 (48%), Gaps = 6/187 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE LV  A AF    ++K  V  +LD+ TG+G + +AL K  P       DIS  A
Sbjct: 4   PRPETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPA 59

Query: 134 LEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +   V   +P
Sbjct: 60  LVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEP 119

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFK 251
            ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V   K
Sbjct: 120 SLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVVIHK 179

Query: 252 DYGGNDR 258
           D    DR
Sbjct: 180 DINSKDR 186


>gi|42527988|ref|NP_973086.1| HemK family modification methylase [Treponema denticola ATCC 35405]
 gi|41819033|gb|AAS13005.1| modification methylase, HemK family [Treponema denticola ATCC
           35405]
          Length = 329

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%), Gaps = 35/244 (14%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  + G +DF+     ++ +   P+P+TE LV+ AL F++ +++K + + +LD+ TG+G 
Sbjct: 80  IAYLTGTKDFFGRTFYVNENVLIPKPDTETLVELALNFAMEKLKKNEPLFVLDICTGSGC 139

Query: 111 VCLALLKE----------------------SPF---FKGVGVDISCKALEIAKSNA---V 142
           + L+L  E                      S F   F  +  DIS +AL++ K N    +
Sbjct: 140 IGLSLAAELYENLSQTSNAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDSLL 199

Query: 143 TNGVSERFDTLQSDW---FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            + + +R   +++D    F  V   +  +D+I +NPPY+ S + + L LE    +P ++L
Sbjct: 200 PSALYKRALAVKADLHLPFPCVPEPKRSYDLITANPPYVPSRLTESL-LEDGRSEPCLAL 258

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           DGGI+GL     +A+     LN  G   VE+G         IF S     V   KD  GN
Sbjct: 259 DGGIEGLDLIPPLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGN 318

Query: 257 DRVL 260
           DRV+
Sbjct: 319 DRVI 322


>gi|293363670|ref|ZP_06610420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma alligatoris A21JP2]
 gi|292552777|gb|EFF41537.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma alligatoris A21JP2]
          Length = 234

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 10/178 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +I+G+ ++ NV++ L+     PR ETE LV   L+        ++ + ILDL +G+G 
Sbjct: 34  IQKIIGYVEYANVKINLNHKVLIPRYETEELVYLILS------RHKENIDILDLCSGSGF 87

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +AL K    F     DI  +A+  ++ N++ N    + + +QSD F ++   FD+IVS
Sbjct: 88  IGIALKKNQKCFNITLADIDNEAILQSQENSILNDA--KVEIIQSDLFKNINKRFDIIVS 145

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPY+     + +   V D++P  +L     GL  Y+ I +    +LNK+G    EI 
Sbjct: 146 NPPYLMK--NEEISKSVLDYEPHHALYASDQGLYFYKKIINSAKDYLNKNGKIYFEIN 201


>gi|282889839|ref|ZP_06298378.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500413|gb|EFB42693.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 285

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 10/213 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I G  +FY+    ++     PR ETE+L D  +A +L + +    V + D+  G+G 
Sbjct: 71  LQYITGQVEFYDCSFKVNPAVLIPRNETEILAD-LIAQNLRQQDLSGKV-LWDVCCGSGC 128

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + ++L K+ P  + +  DIS KAL++AK N+  N V   F  +Q D+    +G   D +V
Sbjct: 129 LGISLKKKFPQLRVILADISDKALQVAKENSFLNRVDVEF--VQGDFLQPFKGTQTDFLV 186

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
            NPPYI     + L  EV+ ++P+ +L GG DGL  Y+ +   +   L   G   +EIG+
Sbjct: 187 CNPPYIPESDWESLEDEVK-YEPKEALLGGADGLQFYKRLMTELPFFLKPLGKVWLEIGF 245

Query: 230 NQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
           NQ   V  +FE      +  +    KD+ GNDR
Sbjct: 246 NQGTAVQTLFEQNSRGCRWKICRFEKDWSGNDR 278


>gi|213648796|ref|ZP_03378849.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 179

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 8/162 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E I  + G R+F+++ L +S  T  PRP+TE LV+ ALA    R+  +   RILD
Sbjct: 22  RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA----RLPVK-TCRILD 76

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTGTGA+ LAL  E P  +   VD    A+ +A  NA    +      LQS WFS++ G
Sbjct: 77  LGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSG 135

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             FD+IVSNPPYI++        +VR F+PR +L    +G++
Sbjct: 136 QQFDMIVSNPPYIDAQDPHLSEGDVR-FEPRSALVADENGMA 176


>gi|269114935|ref|YP_003302698.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis]
 gi|268322560|emb|CAX37295.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis ATCC 23114]
          Length = 235

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 127/252 (50%), Gaps = 32/252 (12%)

Query: 23  IVDPDSVLDDRQRF----FLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           ++D + +L +++R+    +++   +R LK +  + +I+G+++F NV L L   T  PR E
Sbjct: 1   MIDKEILLREKERYNLPLYISKKELRMLKKDIPVQKIIGYQEFQNVILNLKYKTLIPRYE 60

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           TE ++ +A  F    I+K    ++LDLG G+G + LA+ K     K   V   DIS  A+
Sbjct: 61  TEEVILAAYPF----IKKES--KVLDLGCGSGLIGLAIKKN----KDANVTLSDISRFAI 110

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDP 192
           +  K NA  N ++   + ++S+WF+ +   FDVIV NPPY+  +  ++  L  E     P
Sbjct: 111 KQTKINAKLNNLN--VNVIRSNWFNKITSKFDVIVCNPPYLKKQKKLIKSLKWE-----P 163

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           + +L    +GL  Y+ I      +LN+ G+   E+          ++   K   V   KD
Sbjct: 164 KRALFARDNGLFAYKKILKSAFNYLNEKGIIIFEVD-----PYCSLWFKNKFPNVLILKD 218

Query: 253 YGGNDRVLLFCR 264
               DR+ L  +
Sbjct: 219 INNKDRIALLAK 230


>gi|198282492|ref|YP_002218813.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665801|ref|YP_002424682.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247013|gb|ACH82606.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518014|gb|ACK78600.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 303

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 5/210 (2%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +LD  +     +   R +       I G   F  +R ++      PR   E  ++   A 
Sbjct: 69  LLDREKTTIFKHFYQREILRRPAAYITGEAWFAGLRFSVDERVLIPRSLLEPFIEEGFA- 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P +E   V RIL++GTG+G + + L    P  +   VDIS  AL +A +N    G+ +
Sbjct: 128 --PWVEASQVRRILEIGTGSGCMAITLALRFPEAEVDAVDISADALSVAHANIRRYGLED 185

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R    QSD F+++EG  +D+I+SNPPY++++ +  L  E R  +PR++L  G DGL    
Sbjct: 186 RVHLHQSDLFAALEGRRYDLILSNPPYVDAIAMAELTPEYR-HEPRLALAAGEDGLDCLL 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            + +    HL   G+  VE G  ++  + R
Sbjct: 245 PLLEQAPHHLEGGGVLVVETGDAEEALIRR 274


>gi|332972989|gb|EGK10929.1| protein-(glutamine-N5) methyltransferase [Kingella kingae ATCC
           23330]
          Length = 312

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + + +  P  +   VDIS  ALE+A  N    G+ +R
Sbjct: 136 PWIEYPELVHRALDLCTGSGCLAIQMAEHYPAAEIDAVDISLDALEVAAINVEDYGLQDR 195

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + + +D F  ++G +D+I+SNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 196 INLIHTDLFEGLDGTYDLIISNPPYVDAESVAELPEEYL-HEPELALGSGEDGLDATRQI 254

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +R LN  G+  VEIG+N+ V
Sbjct: 255 LLQAARFLNPQGVLLVEIGHNRDV 278


>gi|255506596|ref|ZP_05382235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis D(s)2923]
 gi|289525069|emb|CBJ14539.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis Sweden2]
 gi|296434609|gb|ADH16787.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis E/150]
 gi|296438327|gb|ADH20480.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis E/11023]
          Length = 290

 Score = 93.6 bits (231), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+          EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           DV +IF ++ +      KDY   DR    
Sbjct: 244 DVKKIFHAKGI-RGRVLKDYAQLDRFFFL 271


>gi|296315211|ref|ZP_06865152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria polysaccharea ATCC 43768]
 gi|296837844|gb|EFH21782.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria polysaccharea ATCC 43768]
          Length = 303

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|260172133|ref|ZP_05758545.1| putative protoporphyrinogen oxidase [Bacteroides sp. D2]
 gi|315920442|ref|ZP_07916682.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694317|gb|EFS31152.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 278

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 12/257 (4%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F      ++S  
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRNFKVASGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E  +   +LD+GTG+G + ++L K+ P       DIS 
Sbjct: 90  LIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWDISE 143

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N        RF   D L  DW       FDVIVSNPPY+     + +   V 
Sbjct: 144 EALAIARKNNEDLEAGVRFLQRDVLSDDWEKVPS--FDVIVSNPPYVTETEKNEMDANVL 201

Query: 189 DFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  +   V
Sbjct: 202 DWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQYRDV 261

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G DR++   R
Sbjct: 262 RVIKDIFGKDRIVTANR 278


>gi|195118905|ref|XP_002003972.1| GI18199 [Drosophila mojavensis]
 gi|193914547|gb|EDW13414.1| GI18199 [Drosophila mojavensis]
          Length = 337

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 117/245 (47%), Gaps = 19/245 (7%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  +       
Sbjct: 101 LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFI----RLV 151

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +    K + V +L++G G+GA+ L++L   P      ++ S  A ++A  NA   G+ +R
Sbjct: 152 IENYRKVEHVNMLEVGCGSGAMSLSMLHALPQVDATAIERSKAATKLAWENAKLLGLHQR 211

Query: 150 FD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           F     T+++D +   E     +D+I+SNPPY+++     L  EV  ++   +LDGG DG
Sbjct: 212 FKVFNHTMETDNYLPTELQDKQYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 271

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259
           L   R + +   RHL   G   +E+G +    V  I   +   +L  V +++D    +R 
Sbjct: 272 LRVARLVFELACRHLRPGGQLWLELGNDHPPLVKTIMNMQYQGRLNFVQSYEDQYKRERF 331

Query: 260 LLFCR 264
           +   R
Sbjct: 332 VQLER 336


>gi|228473463|ref|ZP_04058216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga gingivalis ATCC 33624]
 gi|228275070|gb|EEK13873.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga gingivalis ATCC 33624]
          Length = 281

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 16/251 (6%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G++  + I+  D  +   ++  L        K+  I  I     F  + L + S    PR
Sbjct: 35  GMNQVEAILYHDQEIAQEKKMELQRVCQELSKNIPIQYIYQKAHFLGLSLYVDSRVLIPR 94

Query: 76  PETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            ETE LVD  +    + P++      RILD+GTG+GA+ +AL K  P      +DIS  A
Sbjct: 95  QETEELVDWIVTSYMAAPQL------RILDIGTGSGAIAIALKKHLPQASLTAIDISEGA 148

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDF 190
           L +A+ NA  +GV+  F  LQ D    VE L   +D+IVSNPPY+  +    +   V D+
Sbjct: 149 LAVAQQNAKRHGVAITF--LQQDIL-GVEDLGTSYDIIVSNPPYVRELEKKEMHANVLDY 205

Query: 191 DPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +P ++L    D  L  Y  IA+  +R+L ++G    EI        + +   +K F    
Sbjct: 206 EPSLALFVPDDNPLLFYEKIAEIAARNLTEEGTLYFEINQYLGQQTLEMLH-KKGFKALL 264

Query: 250 FKDYGGNDRVL 260
            KD   NDR++
Sbjct: 265 RKDLNDNDRMI 275


>gi|296268874|ref|YP_003651506.1| HemK family modification methylase [Thermobispora bispora DSM
           43833]
 gi|296091661|gb|ADG87613.1| modification methylase, HemK family [Thermobispora bispora DSM
           43833]
          Length = 284

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 15/259 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+S  ++    D   D   RF+    I R    E +  I G   F  + L
Sbjct: 26  DAEEIAAFVHGVSRGRLHTVKDEDFD--ARFW--EGIARREAREPLQHITGRAYFRYLSL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE++      +++ R+ + DV    ++DLGTG+GA+ L++ +E    +
Sbjct: 82  EVGPGVFVPRPETEVMT----GWAIDRLREMDVASPIVVDLGTGSGAIALSIAQEVALAQ 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V+I   A   AK N + +G    F   +  +D    + G  D+++SNPPYI    V 
Sbjct: 138 VHAVEIDPVAYSWAKKNVLEHGQGRVFLHPEDLADCLPELNGQVDLVISNPPYIPPGEV- 196

Query: 182 CLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
               EVRD+DP  +L G G DGL   R +     R L   G  +VE    Q   V  +F 
Sbjct: 197 PRDPEVRDYDPSRALYGSGEDGLGEIRAVERTARRLLRPGGYVAVEHAECQANAVYWLFA 256

Query: 241 SRKLFL-VNAFKDYGGNDR 258
             K +  V   +D  G DR
Sbjct: 257 EEKGWRDVRTRQDLTGRDR 275


>gi|117927850|ref|YP_872401.1| HemK family modification methylase [Acidothermus cellulolyticus
           11B]
 gi|117648313|gb|ABK52415.1| modification methylase, HemK family [Acidothermus cellulolyticus
           11B]
          Length = 294

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 102/220 (46%), Gaps = 6/220 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  +   +  + G   F  + L +    F PRPETE+L  +       R +      +
Sbjct: 71  VARRAQRVPLQHLTGSVGFRRLELAVGPGVFVPRPETEVL--AGWCIETLRADGPAQPLV 128

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158
           +DL TG+GA+ L++ +E P  +   VD    A   A+ N    G++ R   L +D     
Sbjct: 129 VDLCTGSGAIALSIAQEVPAARVFAVDDDPVATAWAQRNVAGTGLAGRVVVLCADAAVAL 188

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             ++G  D++V+NPPY+       L  EVRD DP  +L    DGL+    I +   R L 
Sbjct: 189 PELDGQVDLVVANPPYLAEGDRQLLEPEVRDHDPPRALWSDADGLAGPAMIVEAARRLLR 248

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             G  +VE G  Q+  VV +F+ R    V A +D  G DR
Sbjct: 249 PGGRVAVEHGDGQRAAVVGLFD-RGWSEVAAHQDLTGRDR 287


>gi|227537350|ref|ZP_03967399.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242853|gb|EEI92868.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 267

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 115/256 (44%), Gaps = 16/256 (6%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
            V G++  Q  V  D V+ + Q+  L   +   L+ + I  IL   DFY     ++    
Sbjct: 16  EVAGINRMQYTVQNDHVVTEEQKVQLDRILQELLRRKPIQHILKKADFYGEIFEVNEFVL 75

Query: 73  EPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            PRPETE LV   +      ++P       ++I+D+GTG+G + + L K  P      +D
Sbjct: 76  IPRPETEELVHLIIGHHRSSAVP-------LKIIDIGTGSGCIPVILKKHVPAAHVSALD 128

Query: 129 ISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           IS +A+ +AK N         F   D L+ ++  + E L+D+IVSNPPYI     + +  
Sbjct: 129 ISKEAIAVAKRNTKKMETDIHFVNADILEWEYLFT-EQLYDIIVSNPPYITPKEKEEMHS 187

Query: 186 EVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V +F+P ++L       L  Y TIA     HL   G    EI      +   +   +  
Sbjct: 188 NVLEFEPHLALFVEESAPLLFYETIASFALVHLKPAGDLYFEINQYYGPETADMLRKKGF 247

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD  G DR++
Sbjct: 248 SKVELIKDMHGADRMI 263


>gi|222529062|ref|YP_002572944.1| HemK family modification methylase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455909|gb|ACM60171.1| modification methylase, HemK family [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 288

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 24/262 (9%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L ++  +   +VI++    ++  +   + NAI + L+   +        F  + L +  
Sbjct: 37  MLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELYVDE 96

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGV 127
           +   PR +TE+LV+ A+       + +  +  LD+GTG+G + +AL K   F   K   V
Sbjct: 97  NVLIPRFDTEVLVEVAIEI----FKSKKNLYFLDIGTGSGCIAVALCK---FLDCKVFAV 149

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185
           DIS +ALE+A  NA  NGV  R   ++S+ F  +     +D I+SNPPYI          
Sbjct: 150 DISERALEVASKNAKLNGVENRISFVRSNLFEDIPKNLRYDAIISNPPYISDE------- 202

Query: 186 EVRDFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           E+ + DPR      I+L    DGL  +R IA+    +L   G    E+G++Q   V  I 
Sbjct: 203 EIFELDPRVLKEPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEIL 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           +      +++ +D    +R + 
Sbjct: 263 KKNGYKNISSRRDLNNVERCIF 284


>gi|302872095|ref|YP_003840731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574954|gb|ADL42745.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 288

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           + NAI + L+   +        F  +   +  +   PR +TE+LV+ A+       + R 
Sbjct: 65  IVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLIPRFDTEVLVEVAIEI----FKDRK 120

Query: 98  VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  LD+GTG+G + +AL K   F   K + VDIS +ALE+A+ NA  NGV  R   ++S
Sbjct: 121 NLYFLDIGTGSGCIAVALCK---FLDCKVLAVDISERALEVARKNAKLNGVENRISFVRS 177

Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + F  +     FD I+SNPPYI       L  +V   +P I+L    +GL  ++ IA   
Sbjct: 178 NLFEDIPKNLRFDAILSNPPYISESERFKLEKQVLK-EPHIALFSKENGLWFFKEIASKA 236

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             +L   G    E+G++Q  +V RI E      + + KD    +R + 
Sbjct: 237 KLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKSRKDLNNIERCIF 284


>gi|50954443|ref|YP_061731.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950925|gb|AAT88626.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 292

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 101/226 (44%), Gaps = 11/226 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRI 101
           R    E +  I G   F ++ L +    F PRPETE +   A+    ++P  E      +
Sbjct: 72  RRAAREPVQHITGRAPFRSLELAVGPGVFVPRPETEQVAQFAIDALRAVPSPEPI----V 127

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTLQSDWF 158
            DLGTG+GA+ LAL  E P  +   V+ S +A   ++ N   A    V   F  L +D  
Sbjct: 128 ADLGTGSGAIALALATEVPHARVFAVENSPEAFVWSRRNIDAAGAPNVRAVFADL-ADAL 186

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             ++G  DV++SNPPY+    V     EVR FDP ++L GG DGL   RTI+    R L 
Sbjct: 187 PDLDGAVDVVISNPPYVPDAAV-PRDPEVRLFDPHVALYGGEDGLDVVRTISRVAWRLLR 245

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             G   +E G  Q   V  +  +         +D    DR     R
Sbjct: 246 SGGALVLEHGERQGAAVRDLLTADGWRAAATHRDLTARDRATTATR 291


>gi|218768677|ref|YP_002343189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis Z2491]
 gi|18203133|sp|Q9JTA1|Y1912_NEIMA RecName: Full=Uncharacterized adenine-specific methylase NMA1912
 gi|121052685|emb|CAM09027.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|254669591|emb|CBA03601.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha153]
 gi|325142818|gb|EGC65188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis 961-5945]
 gi|325198754|gb|ADY94210.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis G2136]
          Length = 303

 Score = 93.2 bits (230), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|298208448|ref|YP_003716627.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus
           HTCC2559]
 gi|83848371|gb|EAP86240.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus
           HTCC2559]
          Length = 282

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 22/268 (8%)

Query: 4   LRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           +++ H+F   ++     +S   ++++PD+V+        T A  R    E I  I+G  +
Sbjct: 20  VQEIHNFFVLLSEAYLKMSRLDIVMNPDTVVSAAILANFTEAFKRLKVFEPIQYIIGETE 79

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+++   ++ D   PRPETE LV   +     + + +  + +LDL TG+G + ++L   S
Sbjct: 80  FFDLNFKVTPDVLIPRPETEDLVRWII-----QDQHKTNLDVLDLCTGSGCIAISL---S 131

Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173
            + K   V   DIS  AL IAK NA  N  +  F   D L SD   S+   +DVIVSNPP
Sbjct: 132 KYLKDATVSALDISTSALAIAKENAENNNTNIHFLLKDILASD---SLPQHYDVIVSNPP 188

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           Y+ ++  D +   V + +P ++L    D  L  Y  I      HL  +G   +EI     
Sbjct: 189 YVRNLEKDLMSNNVLEHEPHLALFVEDDNPLIFYNKIISLSKTHLKPNGTLYLEINEFLG 248

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                + +S     +   KD  G DR+L
Sbjct: 249 EATQALLDSDSFTNIELKKDIFGKDRML 276


>gi|195443344|ref|XP_002069377.1| GK18695 [Drosophila willistoni]
 gi|194165462|gb|EDW80363.1| GK18695 [Drosophila willistoni]
          Length = 315

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 16/208 (7%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           S L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V     
Sbjct: 77  SQLSDFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----R 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +   +    V +L++G G+GA+ L++L   PF   + ++ S  A  +A  NA   G+ 
Sbjct: 128 LVIENYKNDKQVNMLEVGCGSGAMSLSILHRLPFVDAIAIERSKAATALAWENAKLLGLQ 187

Query: 148 ERFD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           ERF     T++ D +   E     +D+I+SNPPY+++     L  EV  ++   +LDGG 
Sbjct: 188 ERFKVYNHTMEEDKYMPDELKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 247

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           DGL   R + +   R+L   G   +E+G
Sbjct: 248 DGLRVARLVFELACRYLRSGGKLWLELG 275


>gi|325134736|gb|EGC57374.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M13399]
 gi|325205626|gb|ADZ01079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M04-240196]
          Length = 303

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|325128697|gb|EGC51562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis N1568]
          Length = 303

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|237802458|ref|YP_002887652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis B/Jali20/OT]
 gi|231273692|emb|CAX10470.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 290

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+          EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           DV +IF ++ +      KDY   DR    
Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271


>gi|154687815|ref|YP_001422976.1| YwkE [Bacillus amyloliquefaciens FZB42]
 gi|154353666|gb|ABS75745.1| YwkE [Bacillus amyloliquefaciens FZB42]
          Length = 286

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76
           +D   +L   Q     + + R  +H  +H+       I+G   FY     ++ D   PRP
Sbjct: 35  MDRSKLLASLQEAVGEDELYRFRRHVEMHKEGIPIQYIIGKEQFYGREFFVNDDVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE +V   L        + + + ++D+GTG+GA+ + L  E   F     DIS +AL++
Sbjct: 95  ETEEVVFHLLDRQKRAFSEAERLNVIDIGTGSGAIAVTLALECGHFSVSASDISKEALQV 154

Query: 137 AKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           A+ NA   G    F  LQ D    F S     D+IVSNPPYI    +  L   VR  +P 
Sbjct: 155 AERNAQNLGADVCF--LQGDLLTPFISSGKKADIIVSNPPYISEEEMADLSDIVRFHEPL 212

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKD 252
            +L  G DGL  Y+   + +   +    L   EIGYNQ   V  +F  S     V   +D
Sbjct: 213 HALTDGGDGLKFYKRFMEELPLVMKDKALVVFEIGYNQGKAVKDLFRHSFPNAEVEVVQD 272

Query: 253 YGGNDRVL 260
             G DR +
Sbjct: 273 INGKDRTV 280


>gi|161870501|ref|YP_001599673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis 053442]
 gi|161596054|gb|ABX73714.1| adenine specific methylase, putative [Neisseria meningitidis
           053442]
          Length = 291

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P      VD+S  ALE+A  N    G+ ER
Sbjct: 115 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEER 174

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P+++L  G DGL   R I
Sbjct: 175 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPKLALGSGADGLDATRQI 233

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 234 LLNAAKFLNPKGVLLVEIGHNRDV 257


>gi|76788736|ref|YP_327822.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis A/HAR-13]
 gi|166154245|ref|YP_001654363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 434/Bu]
 gi|166155120|ref|YP_001653375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237804373|ref|YP_002888527.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|301335494|ref|ZP_07223738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis L2tet1]
 gi|47558932|gb|AAT35566.1| class 1 release factor N5-glutamine S-adenosyl-L-methionine
           dependent methyltransferase [Chlamydia trachomatis]
 gi|76167266|gb|AAX50274.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis A/HAR-13]
 gi|165930233|emb|CAP03718.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis 434/Bu]
 gi|165931108|emb|CAP06672.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|231272673|emb|CAX09576.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|296435540|gb|ADH17714.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/9768]
 gi|296437400|gb|ADH19561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/11074]
 gi|297139899|gb|ADH96657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/9301]
          Length = 290

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+          EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           DV +IF ++ +      KDY   DR    
Sbjct: 244 DVKQIFHAKGI-RGRVLKDYAQLDRFFFL 271


>gi|121635295|ref|YP_975540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis FAM18]
 gi|304386871|ref|ZP_07369133.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|120867001|emb|CAM10764.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|254672107|emb|CBA04814.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha275]
 gi|261392121|emb|CAX49619.1| putative adenine-specific methylase [Neisseria meningitidis 8013]
 gi|304339030|gb|EFM05122.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|325131159|gb|EGC53879.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis OX99.30304]
 gi|325133019|gb|EGC55693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M6190]
 gi|325138683|gb|EGC61236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis ES14902]
 gi|325144902|gb|EGC67188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240013]
          Length = 303

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|302333763|gb|ADL23956.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 278

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 18/229 (7%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE      +   L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE----EVMLHFLQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ IA++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNIARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            K      EIGYNQ    K  ++  F  +K   ++  +D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQGEALKSIILNKFPDKK---IDIIQDINGHDRIVSF 276


>gi|15677504|ref|NP_274660.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis MC58]
 gi|18203146|sp|Q9JYC0|Y1655_NEIMB RecName: Full=Uncharacterized adenine-specific methylase NMB1655
 gi|7226907|gb|AAF42004.1| putative adenine specific methylase [Neisseria meningitidis MC58]
 gi|308389776|gb|ADO32096.1| hypothetical protein NMBB_1897 [Neisseria meningitidis alpha710]
 gi|316985002|gb|EFV63956.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis H44/76]
 gi|319410908|emb|CBY91303.1| putative adenine-specific methylase [Neisseria meningitidis WUE
           2594]
 gi|325136695|gb|EGC59295.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M0579]
 gi|325140791|gb|EGC63302.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis CU385]
 gi|325199751|gb|ADY95206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis H44/76]
 gi|325201686|gb|ADY97140.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240149]
 gi|325204616|gb|ADZ00070.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240355]
 gi|325208578|gb|ADZ04030.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis NZ-05/33]
          Length = 303

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINVEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|302554165|ref|ZP_07306507.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
 gi|302471783|gb|EFL34876.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
          Length = 281

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 7/204 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100
           I R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV  
Sbjct: 58  IARREAREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEP 113

Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I+DL TG+GA+ LAL +E P  +   V++S  AL+  + N   + V  R     +  F 
Sbjct: 114 CIVDLCTGSGAIALALAQEVPRSRVHAVELSEDALQWTRKNVEGSRVELRQGNALTA-FP 172

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            ++G  D+++SNPPYI     + +  E RD+DP ++L  G DGL   R +     R L  
Sbjct: 173 DLDGQVDLVISNPPYIPLTEWEYVAPEARDYDPDMALFSGEDGLDLIRGLERTAHRLLRP 232

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243
            G+  VE    Q   V  IF   +
Sbjct: 233 GGVVVVEHADTQGGQVPWIFTEER 256


>gi|82702975|ref|YP_412541.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosospira multiformis ATCC 25196]
 gi|82411040|gb|ABB75149.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
          Length = 302

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 6/143 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           E  +V   LDL TG+G  CLA+L    F        DIS  AL++A+ N    G+ +R D
Sbjct: 127 EPAEVYSALDLCTGSG--CLAILLAHAFPNAAIDATDISANALQVAEKNVEEYGLEDRID 184

Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +QSD F+++ +  +D+IVSNPPY+ +  +  L  E R  +P+ +L  G DGL   + I 
Sbjct: 185 LIQSDLFAALADRRYDLIVSNPPYVNAEAMAALPEEYR-HEPQSALASGEDGLKATKVIL 243

Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233
              + HL  DGL  VEIG+N++ 
Sbjct: 244 RDAANHLTADGLLIVEIGHNREA 266


>gi|312877229|ref|ZP_07737198.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796038|gb|EFR12398.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 288

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 117/239 (48%), Gaps = 24/239 (10%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           ++ G+   +VI++    +   +   + NAI R L+   +        F      +  +  
Sbjct: 40  QILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFYVDENVL 99

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDIS 130
            PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K   F     + VDIS
Sbjct: 100 IPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCK---FLDCNVLAVDIS 152

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL-FDVIVSNPPYIESVIVDCLGLEVR 188
            +ALE+A+ NA  NGV  +   ++S+ F ++ + L FD I+SNPPYI          E+ 
Sbjct: 153 ERALEVARKNAKLNGVENKILFIRSNLFENIPQNLKFDAILSNPPYISKD-------EIF 205

Query: 189 DFDPR------ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           + DPR      I+L    DG   ++ IA+    +L   G    E+G++Q  +V RI E 
Sbjct: 206 ELDPRVLKEPHIALFSEEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQ 264


>gi|312127876|ref|YP_003992750.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777895|gb|ADQ07381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 288

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 12/228 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           + NAI + L+   +        F  +   +  +   PR +TE+LV+ A+       + R 
Sbjct: 65  IVNAISKYLQDYPLQYCTNKAFFMGLEFYVDENVLIPRFDTEVLVEVAIEI----FKGRK 120

Query: 98  VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  LD+GTG+G + +AL K   F   K + VDIS +ALE+A+ NA  NGV  R   ++S
Sbjct: 121 NLYFLDIGTGSGCIAVALCK---FLDCKVLAVDISERALEVARKNAKLNGVENRISFVRS 177

Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + F  +      D I+SNPPYI       L  +V   +P I+L    DGL  ++ IA+  
Sbjct: 178 NLFEDIPKNLRLDAILSNPPYISESERFKLEKQVLK-EPHIALFSKEDGLWFFKEIANKA 236

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             +L   G    E+G++Q  +V RI E      + + KD    +R + 
Sbjct: 237 KLYLKDGGYIIFEVGFSQAEEVKRILEQNGYENIKSRKDLNNIERCIF 284


>gi|312869610|ref|ZP_07729761.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus oris PB013-T2-3]
 gi|311094896|gb|EFQ53189.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus oris PB013-T2-3]
          Length = 289

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 7/206 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +   A+ + L H     I+G   FY  +  ++     P  ET  LVD  L  S P   + 
Sbjct: 59  WFRTAVDQLLNHVPAQYIVGQTTFYGRQFKVTPAVLVPEAETAELVDWVLT-SQPADHQ- 116

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +R+LDLGTG+G + + L  E P +     DIS  AL +A+ N   + +S     ++SD
Sbjct: 117 --LRVLDLGTGSGVIGITLALERPRWSVTLSDISSAALAVARENVRQHQLS--LPLVESD 172

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            F+++ G  +D+IV+NPPYI+      +   V D +P I+L     GL  YR + +    
Sbjct: 173 LFANLAGQRYDLIVTNPPYIDPADTAVMDQAVLDHEPPIALFADEHGLGFYRRLFELAGN 232

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFES 241
           HL   G    E GY+Q+  +  + + 
Sbjct: 233 HLRPGGQLFGETGYDQEKSIQALLKQ 258


>gi|15827566|ref|NP_301829.1| protoporphyrinogen oxidase [Mycobacterium leprae TN]
 gi|221230043|ref|YP_002503459.1| putative protoporphyrinogen oxidase [Mycobacterium leprae Br4923]
 gi|13432147|sp|P45832|HEMK_MYCLE RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MleHemKP
 gi|13093116|emb|CAC31516.1| possible protoporphyrinogen oxidase [Mycobacterium leprae]
 gi|219933150|emb|CAR71230.1| possible protoporphyrinogen oxidase [Mycobacterium leprae Br4923]
          Length = 288

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 111/231 (48%), Gaps = 11/231 (4%)

Query: 34  QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           + FF   ++A+    +   +  ++G   F  V L +  D F PRPETE ++   +A  LP
Sbjct: 51  EEFFRRYSDAVAARSRRVPLQHLIGTVSFGPVVLHVGPDVFIPRPETEAILAWVMAQRLP 110

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150
              +R V  I+D  TG+GA+ +AL    P  + +G+D S  AL+ A+ NA    V   R 
Sbjct: 111 ---ERPV--IVDACTGSGALAVALAHHRPAARVIGIDDSDSALDYARRNAEGTAVECVRA 165

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           D         ++G  D+ V+NPPY+  + V+   L  EV  +DPR ++ GG DG++    
Sbjct: 166 DVTTPALLPELDGCVDLFVANPPYVPDDPVVQSILEPEVTQYDPRHAVFGGPDGMALTAD 225

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
           I     R L   GL +VE   +  V  + +     LF  V   +D  G  R
Sbjct: 226 IVGLAGRWLRPGGLFAVEHDDSTSVPTLDLVYRTDLFDDVLTHRDLAGRPR 276


>gi|268319748|ref|YP_003293404.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785]
 gi|262398123|emb|CAX67137.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785]
          Length = 280

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 14/197 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV     ++L  IE     +ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120

Query: 110 AVCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+ +AL+K++       F     DI+  AL  ++ N +   +  +  T +++    +E  
Sbjct: 121 AIMVALVKQAQKQGIQNFNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK- 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+I+SNPPYI+    + +   V   +P  +L GG DGL  YR  A  V  HLN  G   
Sbjct: 178 FDMIISNPPYIKMSEKNLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQFF 237

Query: 225 VEIGYNQKVDVVRIFES 241
           +E G+++K  +  +FE+
Sbjct: 238 LEFGFSEKEQLKELFET 254


>gi|222152014|ref|YP_002561174.1| hypothetical protein MCCL_1771 [Macrococcus caseolyticus JCSC5402]
 gi|222121143|dbj|BAH18478.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 279

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 107/225 (47%), Gaps = 14/225 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R ++HE +  I G++ FY  +  +      PRPETE LV    A +L  +   DVV  
Sbjct: 62  IARLVRHEPLAHITGFQMFYERKFMVDERVLVPRPETEELV----ALALAHVSHSDVVA- 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+GA+   +  ES        DIS +AL++A  N     +  +    + D    +
Sbjct: 117 -DIGTGSGAIAATVQLESG-CTMYASDISREALQVALHNIAL--LDAQVTCFEGDLLRPI 172

Query: 162 --EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              G+  D ++SNPPYI    V  + L    FDP ++L     GL  Y+ +   +   +N
Sbjct: 173 IERGIKLDALLSNPPYISRDEVTEMNLTAL-FDPELALFAEDAGLVLYKRMIQSLPEVMN 231

Query: 219 KDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLF 262
           +    + EIG+ Q   + + I E      VN  KD  GNDRVL F
Sbjct: 232 QGAFIAFEIGHRQAEALTQYIHEHFSHLRVNIHKDMNGNDRVLWF 276


>gi|311898377|dbj|BAJ30785.1| putative protein methyltransferase HemK [Kitasatospora setae
           KM-6054]
          Length = 288

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 106/242 (43%), Gaps = 16/242 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+   PD   D R       A+ R  + E +  I G   F  + L
Sbjct: 26  DAEELAAHVHGVKRSQLHTVPDGDFDAR----YWEAVSRREQREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE +V+    +++  +   DV    ++DL TG+GA+ LAL +E P   
Sbjct: 82  EVGPGVFVPRPETESVVE----WAIDAVRAMDVAEPLVVDLCTGSGAIALALAQELPRST 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIES 177
               ++   AL   + N   +    R    Q D   +       +G FD+++SNPPYI  
Sbjct: 138 VHAFELDEGALAYTRRNVEASPDRARVHLHQGDATQAFADDRGWDGRFDLVISNPPYIPL 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              + +  E RD DP++SL  G DGL   R I    +R L   G   +E    Q   V  
Sbjct: 198 TEWEYVAPEARDHDPQMSLFSGEDGLDTIRGIERVAARLLRPGGAVVIEHADTQGGQVPW 257

Query: 238 IF 239
           IF
Sbjct: 258 IF 259


>gi|229545077|ref|ZP_04433802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX1322]
 gi|307287618|ref|ZP_07567661.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0109]
 gi|229309969|gb|EEN75956.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX1322]
 gi|306501356|gb|EFM70659.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0109]
 gi|315165015|gb|EFU09032.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1302]
          Length = 277

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 17/212 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  +FY     ++  T  PRPETE LV+  L     +      + ++D+GTGTG + +
Sbjct: 73  LLGQAEFYGHSFIVNEHTLIPRPETEELVERCL-----KANPDTPLTVVDVGTGTGVIAI 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVS 170
           +L    P ++ + +D+S +AL +AK NA   G    F   + LQ      +    D+++S
Sbjct: 128 SLKLARPNWRVIAIDLSEEALTVAKQNAKVLGADIEFYHGNGLQPVASEKI----DLLIS 183

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI       +   VR ++P+ +L    +GL+ Y+ +       L  DG    EIG+ 
Sbjct: 184 NPPYISEQEWHLMDASVRTYEPKTALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQ 243

Query: 231 QKVDVVRIFES---RKLFLVNAFKDYGGNDRV 259
           Q   +  +  +   +K   +   KD  GNDR+
Sbjct: 244 QGAALQELLSAAYPQKTIKIE--KDLSGNDRL 273


>gi|255020677|ref|ZP_05292739.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756]
 gi|254969913|gb|EET27413.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756]
          Length = 290

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 103/218 (47%), Gaps = 11/218 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +   LG   F +  L +S     PR +TE+LV +AL     R+      ++LD
Sbjct: 69  RRLSGEPLAYCLGTAPFLDFELAVSPAVLIPRADTEVLVQAALE----RMPLYGRQKVLD 124

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTG+GA+ LAL +  P  +  GVD+S  AL +A++NA   G+    D  Q  W  ++  
Sbjct: 125 LGTGSGAIALALARSRPTAEITGVDLSSDALALARANAKALGLV--VDWQQGHWCRALAP 182

Query: 164 --LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD+IVSNPPY+ +   D   L     +P ++L  G  G   +  I + V   LN   
Sbjct: 183 GQRFDLIVSNPPYLAA---DDPHLAELQHEPALALVAGPTGYEAFTEILEAVRDRLNPGA 239

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
               E G++Q   +     +     V   +D  G +RV
Sbjct: 240 WLLFEHGWDQGPALRERLTASGFRAVFGQRDGAGRERV 277


>gi|302680659|ref|XP_003030011.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8]
 gi|300103702|gb|EFI95108.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8]
          Length = 292

 Score = 92.8 bits (229), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 113/242 (46%), Gaps = 20/242 (8%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L N + R +  E +  ILG + F ++ +T+      PRPETE            ++ +R 
Sbjct: 40  LQNLLARRVAGEPLQYILGSQPFGDLEITVRPPVLIPRPETEDWTIRLSELLARKVRRRA 99

Query: 98  VVRILDLGTGTGAVCLALLKESP--FFKGVGVDISCKALEIAKSN-------AVTNGVSE 148
            + + DLGTGTG + L L    P    +  G D+S  A+ +A  N       AV +G+  
Sbjct: 100 PITLFDLGTGTGCIPLLLCHLLPQGTIRAHGFDLSPDAVALANENAKTSNIPAVASGLVN 159

Query: 149 RFDTLQSDWFS------SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            F    +D+ S      +   L  DV+ SNPPYI +   + L  EV+D++   +L  G  
Sbjct: 160 TFSATLADFASARFRADTAHALPCDVLTSNPPYIST--SEPLPAEVKDWEDSRALFAGES 217

Query: 202 GLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           GL  Y  I   ++    L  DGL ++EIG+ Q   V  I  S  L  +  ++D  G DR 
Sbjct: 218 GLQCYEAIGKLLASPGFLAPDGLVALEIGHTQAQPVRDILASAGLREIEIWQDPWGKDRT 277

Query: 260 LL 261
           ++
Sbjct: 278 VV 279


>gi|325981112|ref|YP_004293514.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Nitrosomonas sp. AL212]
 gi|325530631|gb|ADZ25352.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Nitrosomonas sp. AL212]
          Length = 298

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V   LDL TG+G  CLA+L    F       VDIS +AL +A  N    G+ ER   ++S
Sbjct: 131 VATTLDLCTGSG--CLAILMAHSFPNAALDAVDISAQALAVAHKNIQDYGLQERITLIES 188

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + FS++ E  +D+I+SNPPY+ +  +  L  E R ++P  +L  G DGL   R I    +
Sbjct: 189 NLFSALQEKRYDLIISNPPYVNAASMAQLPQEYR-YEPENALASGTDGLDATRQILQHAA 247

Query: 215 RHLNKDGLCSVEIGYNQKV 233
           R+L  DG+  VEIG+N++ 
Sbjct: 248 RYLTDDGILVVEIGHNREA 266


>gi|317164621|gb|ADV08162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 299

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 123 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 183 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 242 LLNAAKFLNPKGVLLVEIGHNRDV 265


>gi|15604742|ref|NP_219526.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis D/UW-3/CX]
 gi|255310825|ref|ZP_05353395.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 6276]
 gi|255317125|ref|ZP_05358371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 6276s]
 gi|3328414|gb|AAC67614.1| N6-adenine-specific DNA methylase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748155|gb|ADI50701.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis D-EC]
 gi|297749035|gb|ADI51713.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis D-LC]
          Length = 290

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+          EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           D+ +IF ++ +      KDY   DR    
Sbjct: 244 DIKQIFHAKGI-RGRVLKDYAQLDRFFFL 271


>gi|59801654|ref|YP_208366.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA 1090]
 gi|194099064|ref|YP_002002145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae NCCP11945]
 gi|239999365|ref|ZP_04719289.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|240014548|ref|ZP_04721461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI18]
 gi|240016993|ref|ZP_04723533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA6140]
 gi|240081435|ref|ZP_04725978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|240113630|ref|ZP_04728120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|240118353|ref|ZP_04732415.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|240121070|ref|ZP_04734032.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID24-1]
 gi|240123900|ref|ZP_04736856.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|240126100|ref|ZP_04738986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|254494094|ref|ZP_05107265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|268595187|ref|ZP_06129354.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268597536|ref|ZP_06131703.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268599691|ref|ZP_06133858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|268604066|ref|ZP_06138233.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268682525|ref|ZP_06149387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268684689|ref|ZP_06151551.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|293398711|ref|ZP_06642887.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Neisseria gonorrhoeae F62]
 gi|59718549|gb|AAW89954.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934354|gb|ACF30178.1| Hypothetical protein NGK_1520 [Neisseria gonorrhoeae NCCP11945]
 gi|226513134|gb|EEH62479.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|268548576|gb|EEZ43994.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268551324|gb|EEZ46343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268583822|gb|EEZ48498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|268588197|gb|EEZ52873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268622809|gb|EEZ55209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268624973|gb|EEZ57373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|291610851|gb|EFF39950.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Neisseria gonorrhoeae F62]
          Length = 303

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|148260024|ref|YP_001234151.1| HemK family modification methylase [Acidiphilium cryptum JF-5]
 gi|146401705|gb|ABQ30232.1| modification methylase, HemK family [Acidiphilium cryptum JF-5]
          Length = 280

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G + F+++ L +S  T  PRP+TE L+++AL     R ++R +  ILDLGTGTGA+ L
Sbjct: 69  ITGAKGFWSLDLAVSPATLIPRPDTETLIEAALRH---RPDRRKIRTILDLGTGTGALLL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A L E P   G+G+D    A  +A++NA   G++ R      DW  ++   FD+I++NPP
Sbjct: 126 AALAEYPDAFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPP 185

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI S  +  L  EV   +P  +LDGG DG   YR I   + R L   GL  +E G  Q
Sbjct: 186 YIPSADIPGLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQ 243


>gi|15834913|ref|NP_296672.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Nigg]
 gi|270285083|ref|ZP_06194477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Nigg]
 gi|270289106|ref|ZP_06195408.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Weiss]
 gi|301336479|ref|ZP_07224681.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum MopnTet14]
 gi|8163189|gb|AAF73543.1| modification methylase, HemK family [Chlamydia muridarum Nigg]
          Length = 290

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  + L +S +   PR ETE+ V+  + +     EK+      D+  G+G + L
Sbjct: 69  IHGKVHFLGIELQVSPEVLIPRQETEIFVEKIIGYLQTHKEKKI---FYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           ++ K  P    V  DI  +AL +AKSNA  N +    D L  D F       D  V NPP
Sbjct: 126 SVKKHCPHVHVVLSDICSQALAVAKSNAKRNDLI--VDFLCGDLFEPFRIPADAFVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+       +  EVR  +P  +L GG+ GL  Y  IA+ + + L   G+  +EIG NQ  
Sbjct: 184 YLSYKEFFKVDPEVRCHEPWKALVGGVSGLEFYHRIAEHIHKILVPGGVGWLEIGSNQGE 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            V +IF  + +     FKDY   DR    
Sbjct: 244 SVKKIFRDKGISGC-VFKDYAQLDRFFFL 271


>gi|317405182|gb|EFV85523.1| adenine-specific methylase [Achromobacter xylosoxidans C54]
          Length = 298

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 106/196 (54%), Gaps = 16/196 (8%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130
           PR     L+D  L+   P ++    V  +LD+ TG+G  CLA+L     P+ +   VD+S
Sbjct: 109 PRSPIAELLDEGLS---PWVQDAQAVDSVLDMCTGSG--CLAILSALAFPYAQVDAVDVS 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A+ N    G+++R    QSD F S+ E  +DVIV NPPY+ S  +D L  E R 
Sbjct: 164 PDALEVARRNVDDYGLADRLALHQSDLFDSLPERQYDVIVCNPPYVNSGSMDVLPQEYR- 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P+++L GG DG+   R I     R+L+++G+  +EIG+ +       FE+    L   
Sbjct: 223 HEPQLALAGGADGMDLVRRILQAAPRYLSENGVLVLEIGHERD-----FFEAAFPELSPV 277

Query: 250 FKDY-GGNDRVLLFCR 264
           + D    +D++LL  R
Sbjct: 278 WLDTEQASDQLLLLTR 293


>gi|169351466|ref|ZP_02868404.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552]
 gi|169291688|gb|EDS73821.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552]
          Length = 285

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 18/223 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I G   F+     ++ +   PR ETE LV++ L            + + D+GTG+GA
Sbjct: 69  IQYIKGVETFFGRDFKVNENVLIPRYETEELVENILYRIDDYFSGYKNITLCDVGTGSGA 128

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDV 167
           + ++L  E P  K    DIS  AL +AK NA  N +    + L  D    +  + L  D+
Sbjct: 129 IAISLALEEPKLKVYATDISDLALTVAKENA--NNLKADVEFLVGDMLQPLIEKNLKVDI 186

Query: 168 IVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            VSNPPYI +   ++ +   V+D +P ++L GG DGL  YR I + V+  LN+  L + E
Sbjct: 187 FVSNPPYIPQEQEIEAV---VKDNEPHVALFGGNDGLYFYRKIFERVNELLNERALLAFE 243

Query: 227 IGYNQKVDVVRIFES--RKLFLVNAF---KDYGGNDRVLLFCR 264
           +G++Q+     + E   +K F  + +   KD  G DR+L   R
Sbjct: 244 MGFDQR----ELMEEALQKYFPNDPYEIIKDINGKDRMLFIYR 282


>gi|284031474|ref|YP_003381405.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
 gi|283810767|gb|ADB32606.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
          Length = 262

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 9/220 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           +  DDRQ   L   + + +    +  ++GW +F  +R+ L +D F PR  TE LVD A+A
Sbjct: 31  TATDDRQ---LAEMVEQRVAGRPLEHVVGWAEFRGLRVALDADVFVPRRRTEHLVDEAIA 87

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              P         ++DL  G+GA+ LAL    P  +    D+   A++ A+ N    G  
Sbjct: 88  RCRPG------AVVVDLCCGSGALGLALASAVPGTELSATDVHPAAVQNARRNLAPIGGQ 141

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                L +   +++ G  D++++N PY+ S  V  L  E R  +P ++LDGG DGL   R
Sbjct: 142 VFEGDLYARLPTTLRGRVDLLLANVPYVPSDQVRLLPAEARLHEPLVTLDGGSDGLDLLR 201

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            +A   S  L   GL   E    Q    + +F    L  V
Sbjct: 202 RVAAEASDWLVPGGLVVTETSNEQAAIAIDVFRRHGLSAV 241


>gi|328885060|emb|CCA58299.1| Methylase of polypeptide chain release factors [Streptomyces
           venezuelae ATCC 10712]
          Length = 281

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 11/208 (5%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R++ T  + R    E +  I G   F  + L +    F PRPETE    S + +++  + 
Sbjct: 53  RYWET--VARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVR 106

Query: 95  KRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFD 151
             DVV   I+DL TG+GA+ LA+ +E P  +   V++S  AL   + NA  + V+  + D
Sbjct: 107 AMDVVEPLIVDLCTGSGAIALAMAQEVPRSRVHAVELSDDALVWTRKNAEGSRVTVHQGD 166

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            L +     ++G  D+++SNPPYI     + +  E RD DP ++L  G DGL   R I  
Sbjct: 167 ALSA--LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGEDGLDTIRGIER 224

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              R L   GL  +E    Q   V  IF
Sbjct: 225 TAHRLLRPGGLVVIEHADTQGGQVPWIF 252


>gi|198284466|ref|YP_002220787.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665820|ref|YP_002427133.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198248987|gb|ACH84580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518033|gb|ACK78619.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 288

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 11/207 (5%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG   FY + L +S +   PRP+TE LV      +L  + +   VR+LDLG G+GA+ LA
Sbjct: 85  LGEWSFYGLDLRVSPEVLIPRPDTETLV----TLALEGLAEEGAVRVLDLGAGSGAIALA 140

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNP 172
           +    P  +  GV+ S  AL +A++N     ++ R   L+ DW++ ++G   FD IV+NP
Sbjct: 141 IALARPQAEVWGVEHSPAALRVARANGAL--LASRVHWLEGDWYAPLDGALRFDRIVANP 198

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+     D   L     +PR +L  G  GL     I  G    L+  G+  +E G +Q 
Sbjct: 199 PYLAD---DDPHLPDLHHEPRDALVAGPRGLECLERIIAGAYERLSTSGMLLLEHGPDQG 255

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             V R+  +  L  V    D  G +RV
Sbjct: 256 AAVRRLLGNAGLCAVRTRCDLAGRERV 282


>gi|70725919|ref|YP_252833.1| hypothetical protein SH0918 [Staphylococcus haemolyticus JCSC1435]
 gi|68446643|dbj|BAE04227.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 277

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 14/227 (6%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVV 99
           A  R L  E I  I+G++ FY  +  ++     PRPETE ++       L  +E  +   
Sbjct: 58  ATERMLLGEPIQYIVGFQSFYGYQFQVNEHCLIPRPETEEVM-------LHFLENCKSSA 110

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156
            I D+GTG+G + + L K +  F     DI  + LE+A  NA  + V+  F   + L+  
Sbjct: 111 TIADIGTGSGVLAITLKKLNKDFTVYATDIVQETLEVASDNAHYHEVAVTFLKGNALKPF 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             ++++   D IVSNPPYI+   ++ +   V  ++P  +L     G + Y  I + + + 
Sbjct: 171 IQNNIK--LDGIVSNPPYIDVDEMEMMENTVVKYEPHKALFAENKGFAIYELILNDLPKV 228

Query: 217 LNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLF 262
           LNKD   + EIGYNQ   +   I E      V   KD  GN+R++ F
Sbjct: 229 LNKDAYVTFEIGYNQGERLKNIILEKYPKLDVKVIKDINGNERIVSF 275


>gi|42518856|ref|NP_964786.1| hypothetical protein LJ0931 [Lactobacillus johnsonii NCC 533]
 gi|41583142|gb|AAS08752.1| hypothetical protein LJ_0931 [Lactobacillus johnsonii NCC 533]
 gi|329667597|gb|AEB93545.1| hypothetical protein LJP_1223c [Lactobacillus johnsonii DPC 6026]
          Length = 280

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 16/209 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV     ++L  IE     +ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120

Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           A+ +AL+K++   +G+        DI+  AL  ++ N +   +  +  T +++    +E 
Sbjct: 121 AIMVALVKQAQK-QGIQNLNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK 177

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+I+SNPPYI++   + +   V   +P  +L GG DGL  YR  A  V  HLN  G  
Sbjct: 178 -FDMIISNPPYIKTSEKNLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQF 236

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +E G+++K  +  +FE+        FKD
Sbjct: 237 FLEFGFSEKEQLKELFETELPDFEIEFKD 265


>gi|326403020|ref|YP_004283101.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301]
 gi|325049881|dbj|BAJ80219.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301]
          Length = 280

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/178 (39%), Positives = 101/178 (56%), Gaps = 3/178 (1%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G + F+++ L +S  T  PRP+TE L+++AL     R ++R +  ILDLGTGTGA+ L
Sbjct: 69  ITGAKGFWSLDLAVSPATLIPRPDTETLIEAALRH---RPDRRTIRTILDLGTGTGALLL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A L E P   G+G+D    A  +A++NA   G++ R      DW  ++   FD+I++NPP
Sbjct: 126 AALAEYPDAFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPP 185

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           YI S  +  L  EV   +P  +LDGG DG   YR I   + R L   GL  +E G  Q
Sbjct: 186 YIPSADIPGLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQ 243


>gi|317052431|ref|YP_004113547.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurispirillum indicum S5]
 gi|316947515|gb|ADU66991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurispirillum indicum S5]
          Length = 293

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 11/210 (5%)

Query: 39  TNAIVRSLKH--------ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FS 89
           T   ++S KH        E +  I G ++F  +   +      PR +TE +   A+A   
Sbjct: 60  TPEELQSFKHLLQRRTGGEPLAYITGEQNFLGLDFQVGPGVLIPRFDTETIAMEAVARLR 119

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP   ++  +  L  G+G   + +A +   P    +  DI   ALE A+ NA  +  +  
Sbjct: 120 LPCAPQQPAILDLCCGSGVLGITVAHMAGKPCQLTL-ADIDPAALEYAQRNASRHLGAGA 178

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           +  L SD F ++ G FD+I+ NPPY++   +     EVR  +P  +LDGG DGL  YR +
Sbjct: 179 WHVLPSDLFGAIRGTFDLILCNPPYLDQAHLSEREDEVR-HEPLHALDGGRDGLDFYRAL 237

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           A G   HLN  G   +E GY+Q   +  +F
Sbjct: 238 ARGFRHHLNPGGRMLLEAGYDQHQSLASLF 267


>gi|148378144|ref|YP_001252685.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502]
 gi|153933674|ref|YP_001382545.1| HemK family modification methylase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935975|ref|YP_001386097.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. Hall]
 gi|148287628|emb|CAL81693.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502]
 gi|152929718|gb|ABS35218.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. ATCC 19397]
 gi|152931889|gb|ABS37388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. Hall]
          Length = 283

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|269214146|ref|ZP_05983696.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria cinerea ATCC 14685]
 gi|269144447|gb|EEZ70865.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria cinerea ATCC 14685]
          Length = 308

 Score = 92.4 bits (228), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P      VD+S  ALE+A  N    G+ ER
Sbjct: 132 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINVEDYGLEER 191

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 192 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPEEYL-HEPELALGSGEDGLDAIRQI 250

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 251 LLNAAKFLNPKGVLLVEIGHNRDV 274


>gi|291613905|ref|YP_003524062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Sideroxydans lithotrophicus ES-1]
 gi|291584017|gb|ADE11675.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Sideroxydans lithotrophicus ES-1]
          Length = 301

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 8/161 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISC 131
           PR     L+   LA  +  +E+  +  +LD+ TG+G  CLA+L    F       VD+S 
Sbjct: 113 PRSFIAELLREQLAPWISDVER--IHNVLDMCTGSG--CLAILAAHAFPDAHVDAVDLSA 168

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
            AL++A+ N     + ER   ++SD F  +EG  +D+I+SNPPY+++  V  L  E + +
Sbjct: 169 DALDVAQYNVTDYDLEERISLIESDMFDKLEGKRYDLIISNPPYVDAPSVAALPQEYK-Y 227

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           +P+ +L  G DGL   R I +  ++HL  +G+  VEIG+N+
Sbjct: 228 EPQQALGSGTDGLDATRVILEHAAKHLTSNGILVVEIGHNR 268


>gi|224536351|ref|ZP_03676890.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522048|gb|EEF91153.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 278

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 113/259 (43%), Gaps = 12/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S    C + G  +    +  D +L  ++   L + + R    E I  ILG   F      
Sbjct: 25  SRIICCEILGQQTVDYYLGKDIILSVKEEQELESILARLHNFEPIQYILGEARFLGRTFR 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+  L       E   V R+LD+GTG+G + ++L KE P  +   
Sbjct: 85  VTPGVLIPRPETEELVEMMLK------ELSPVSRVLDVGTGSGCIAISLAKELPESQVTA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCL 183
            D+S +AL IA +N+     S RF+  Q D   +   V   +DVIVSNPPY+       +
Sbjct: 139 WDVSGEALSIAAANSKALQASVRFE--QRDVLTYEPCVADCYDVIVSNPPYVTEAEKQEM 196

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V D++P ++L     D L  YR IA      L   G    EI      D V +    
Sbjct: 197 EHNVLDWEPSLALFVPDTDPLRFYRRIAVLGLEMLTSGGKLYFEINRAFGKDTVAMLCET 256

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   KD   NDR ++
Sbjct: 257 GYRAVRLQKDISHNDRFVI 275


>gi|15805280|ref|NP_293969.1| hemK protein [Deinococcus radiodurans R1]
 gi|6457913|gb|AAF09827.1|AE001885_11 hemK protein [Deinococcus radiodurans R1]
          Length = 278

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 7/188 (3%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           ++I R      +  + G  ++  VRLT  +    PRPETE L+  AL   L R+EK    
Sbjct: 59  DSIERRAARVPLQHLTGEVEWGGVRLTSDARALVPRPETEWLLHLALE-ELRRVEK---P 114

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTGA+ L L    P  +    D+S +AL +A+ NA  +G+  +F  ++    +
Sbjct: 115 RVLDVGTGTGALALGLKAAIPQAEVTATDLSPEALSLARENAALSGLDVKF--VEGSLLA 172

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G F++IVSNPPY+ +        EVR  DP ++L  G DGL   R +    +  L  
Sbjct: 173 GLSGPFNLIVSNPPYLPTADRATADPEVR-HDPDLALYAGEDGLDVARPLVAEAAAALVP 231

Query: 220 DGLCSVEI 227
            G   +E+
Sbjct: 232 GGALLLEL 239


>gi|75758470|ref|ZP_00738591.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493997|gb|EAO57092.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 273

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I    G+   ++ ++ +  +   P PE ++ +++A  +        +  ++++L TG+G 
Sbjct: 61  IQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYM------TNCHKVMELCTGSGV 114

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166
           + + L  E P       DIS KAL++A+ N +     +    L+   F   E      FD
Sbjct: 115 IPVMLGMEYPDVDFYASDISDKALKVAQEN-INFYQLKNVHLLKGSMFEPFEEQNKTGFD 173

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++SNPPY ++ I+  L  +++D  PRISLDGG DGL  YR I     + LNK+G    E
Sbjct: 174 MLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYIIFE 233

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G +Q   +  +F      +V   KDY   +R ++
Sbjct: 234 NGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIV 268


>gi|195053095|ref|XP_001993466.1| GH13055 [Drosophila grimshawi]
 gi|193900525|gb|EDV99391.1| GH13055 [Drosophila grimshawi]
          Length = 328

 Score = 92.0 bits (227), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 23/241 (9%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V       
Sbjct: 92  LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 142

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +   ++ + V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ +R
Sbjct: 143 IDNYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIERSKAATALAWENAKLLGLQQR 202

Query: 150 FD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           F+    T+++D +   S  +  +D+I+SNPPY+++     L  EV  ++   +LDGG DG
Sbjct: 203 FEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQYLHPEVVVYENLNALDGGSDG 262

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDYGGND 257
           L   R + D    HL   G   +E+G N+   +V+      +E R L  V +++D    +
Sbjct: 263 LRVARLVFDLACVHLRPGGKLWLELG-NEHPPLVKTIMHLQYEGR-LKFVQSYQDQYKRE 320

Query: 258 R 258
           R
Sbjct: 321 R 321


>gi|170062547|ref|XP_001866716.1| HemK methyltransferase family member 1 [Culex quinquefasciatus]
 gi|167880450|gb|EDS43833.1| HemK methyltransferase family member 1 [Culex quinquefasciatus]
          Length = 328

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 113/241 (46%), Gaps = 13/241 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+VL D Q   +       +    +  I+   DF ++ L +    F PRPETE LV+   
Sbjct: 85  DAVLSDAQLAKIEELCECRIARMPVQYIIREWDFRDMTLKMVPPVFIPRPETEELVE--- 141

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L +I+ +     L++G G+GA+ L+LLK+ P    + +D S  A E+   NA     
Sbjct: 142 -LILQQIDTQKEFSFLEIGCGSGAITLSLLKQVPKATAIALDQSKLACELTLENAKRYDF 200

Query: 147 SERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           SE+    +      +        FD+IVSNPPY+ S  +  L  EV+ ++   +LDGG D
Sbjct: 201 SEKLRIFKHKLVDKLPDELAGHRFDMIVSNPPYVPSGQLQRLDPEVKVYEDLRALDGGPD 260

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGND 257
           GL+  + I    S HL  +G+  +E+  +    +    E       L  V+++KD    +
Sbjct: 261 GLTVIKAILTIASDHLADEGILWLEVDTSHPPLIAGYLEEHGERLGLRYVSSYKDLFRKE 320

Query: 258 R 258
           R
Sbjct: 321 R 321


>gi|240128575|ref|ZP_04741236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268686967|ref|ZP_06153829.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268627251|gb|EEZ59651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
          Length = 303

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAYHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|228905534|ref|ZP_04069483.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis IBL 4222]
 gi|228854070|gb|EEM98779.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis IBL 4222]
          Length = 275

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 11/215 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I    G+   ++ ++ +  +   P PE ++ +++A  +        +  ++++L TG+G 
Sbjct: 63  IQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYM------TNCHKVMELCTGSGV 116

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166
           + + L  E P       DIS KAL++A+ N +     +    L+   F   E      FD
Sbjct: 117 IPVMLGMEYPDVDFYASDISDKALKVAQEN-INFYQLKNVHLLKGSMFEPFEEQNKTGFD 175

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++SNPPY ++ I+  L  +++D  PRISLDGG DGL  YR I     + LNK+G    E
Sbjct: 176 MLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYIIFE 235

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G +Q   +  +F      +V   KDY   +R ++
Sbjct: 236 NGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIV 270


>gi|21241678|ref|NP_641260.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107043|gb|AAM35796.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 286

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 7/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S  T  PR +TE LV+     +L R++     R+
Sbjct: 61  VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTEALVE----LALERLDTLPGRRV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA ++ +    +     WF+ +
Sbjct: 117 ADLGTGSGAIALAIASERPQAQVIATDASAAALAMAQRNADSHSL-RNVECRLGGWFAPL 175

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL   
Sbjct: 176 AGETFDLIASNPPYIAAHDSHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPG 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 235 GWLLLEHGWDQGAAVAELLVARGFAAVATHQDLEQRDRVTL 275


>gi|325281900|ref|YP_004254442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Odoribacter splanchnicus DSM 20712]
 gi|324313709|gb|ADY34262.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Odoribacter splanchnicus DSM 20712]
          Length = 290

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 130/277 (46%), Gaps = 28/277 (10%)

Query: 1   MQALRDSHS-----FLCRVTGLSS-HQVIVD----PDSVLDDR--QRFFLTNAIVRSLKH 48
           +Q L+DS+S      +CR+  +   H   +D     + +LD+    +F     IVR LK 
Sbjct: 12  LQELKDSYSEHEIECICRIVYMDVLHYTNIDIHLRKNEILDESFINKFI---GIVRLLKS 68

Query: 49  ES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            S I  ILG   F  +R   +     PRPETE LV     +  P        R+LD+G+G
Sbjct: 69  GSPIQYILGETGFAGLRFKSTPSALIPRPETEELVRWVGEWLKPG------NRLLDVGSG 122

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL 164
           +G + ++L +        GVDIS +A+E+A+ NA+ NGV   F   D L     ++    
Sbjct: 123 SGCIGISLARLCQGAHVTGVDISPEAIELARENAILNGVKAEFLLRDILHPQ--TASWDT 180

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +D+IVSNPPYI       +  +V D +P  +L     D L  YR IA+    HL+  GL 
Sbjct: 181 YDLIVSNPPYIRESEKGTMEAKVLDHEPHQALFVPDEDPLLFYRAIAEFGLTHLHPQGLL 240

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             EI      + + +        +   KD+ G +R++
Sbjct: 241 FFEINEAFGQETIALLTRYGYRNIELRKDFYGKERMV 277


>gi|157694095|ref|YP_001488557.1| polypeptide chain release factor methyltransferase [Bacillus
           pumilus SAFR-032]
 gi|157682853|gb|ABV63997.1| polypeptide chain release factor methyltransferase [Bacillus
           pumilus SAFR-032]
          Length = 295

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 118/266 (44%), Gaps = 9/266 (3%)

Query: 2   QALRDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD ++    L  V  LS  +++      L D Q       + +  K   +  ++G  
Sbjct: 21  EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPDEQDRLFREFVTQHKKGVPVQHLIGIE 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++     PRPETE +V +AL            ++ +D+GTG+GA+ + L  E
Sbjct: 81  FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLKAVDVGTGSGAIAITLALE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYI 175
                    DIS +AL +AK N    G    F  LQ D    +  +G+  D+ +SNPPYI
Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGADVHF--LQGDLLEPIKDQGIKVDLFISNPPYI 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +  L   V   +P  +L  G DGL  Y+ +   +   L++  +   EIG+ Q  DV
Sbjct: 199 AADEMGGLSEVVTKHEPVNALTDGRDGLWFYKRLVRDLHHVLHEQAVVVFEIGHKQAQDV 258

Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVL 260
              + +S     V   KD  G DR +
Sbjct: 259 KTLLLQSFPAADVRIVKDINGKDRAV 284


>gi|182420255|ref|ZP_02951484.1| methyltransferase, HemK family [Clostridium butyricum 5521]
 gi|237666626|ref|ZP_04526611.1| modification methylase, HemK family [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182375850|gb|EDT73442.1| methyltransferase, HemK family [Clostridium butyricum 5521]
 gi|237657825|gb|EEP55380.1| modification methylase, HemK family [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 585

 Score = 92.0 bits (227), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 7/218 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  IL   +F  + L +      PR +TELLVD  L      I + D  +I DL  
Sbjct: 369 KKMPVKYILNKCEFMGIDLHVEEGVLIPRDDTELLVDEVLK----NISEDDEKQICDLCC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG 163
           G+GA+ ++L       K   +D      ++   N   + + ER    +SD          
Sbjct: 425 GSGAIGISLACLRKNIKVDLLDYYPIPEKVTLINIEKHNLQERVSFSKSDLLDVSIKASK 484

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +D+IVSNPPYIE   ++ L  +V+ ++P  +L GGIDGL  Y+ I +     LN++G+ 
Sbjct: 485 KYDIIVSNPPYIEEEEIEKLMDDVQKYEPHTALSGGIDGLDFYKKIVNQSIEVLNENGIL 544

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + EIGYNQ   V  + E      V   KD+   DR+++
Sbjct: 545 AFEIGYNQGKAVKSLMEENNFKDVRVIKDFASLDRIVI 582


>gi|239982316|ref|ZP_04704840.1| putative methyltransferase [Streptomyces albus J1074]
          Length = 281

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            AI R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 56  EAIARREAREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL +G+GA+ LAL +E P      V++S  AL   + N   +    R    Q D 
Sbjct: 112 EPLVVDLCSGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEGS----RVHLHQGDA 167

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           F ++   +G  D+++SNPPYI     + +  E RD DP+++L  G DGL   R I     
Sbjct: 168 FGALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAH 227

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           R L   G+  VE    Q   V  IF   K
Sbjct: 228 RLLRPGGIVVVEHADTQGGQVPWIFTEEK 256


>gi|238063045|ref|ZP_04607754.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
 gi|237884856|gb|EEP73684.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
          Length = 267

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 6/188 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E +  ILGW +F  +R+ + S  F PR  T  LV+ A+A + P         ++D
Sbjct: 45  RRVLGEPLEAILGWAEFCGLRVIVESGVFVPRQRTTYLVEQAVAVTSPG------AVVVD 98

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           L  GTGA+  A+    P  +    DI   ++  A+ N    G       L       + G
Sbjct: 99  LCCGTGAIGAAVAARVPGTRLYACDIEPASVRCARRNLEPIGGHVYEGDLYDALPGRLRG 158

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             DV+V N PY+ +  +  +  E R+ +P ++LDGG DG+  +R +A+G +R L   G  
Sbjct: 159 AVDVLVVNAPYVPTDEIAMMPPEAREHEPLVALDGGFDGVEVHRRVAEGAARWLAPGGHL 218

Query: 224 SVEIGYNQ 231
            +E G +Q
Sbjct: 219 IIETGESQ 226


>gi|189464286|ref|ZP_03013071.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM
           17393]
 gi|189438076|gb|EDV07061.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM
           17393]
          Length = 278

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 113/259 (43%), Gaps = 12/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S    C + G S     +  D  L  +    L + + R    E I  ILG   F      
Sbjct: 25  SRLICCEILGQSVVDYYLGKDITLSAKAEQELQSLLRRLRNFEPIQYILGEARFLGRTFQ 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S    PRPETE LV+  L       E     R+LD+GTG+G +   L KE P  +   
Sbjct: 85  VASGVLIPRPETEELVEIMLK------EISSTSRVLDIGTGSGCIAATLAKELPGAQVTA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            D+S +AL IA +N++   V   F+  Q D  + + G+   +DVIVSNPPY+       +
Sbjct: 139 WDVSEEALAIAAANSLALQVPVCFE--QRDVLTYIPGVTERYDVIVSNPPYVTEAEKQDM 196

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V D++P ++L     D L  YR I+      L  DG    EI      D+V +    
Sbjct: 197 ERNVLDWEPSLALFVPDADPLRFYRRISVLGLEILEPDGKLYFEINRTFGEDIVLMMREL 256

Query: 243 KLFLVNAFKDYGGNDRVLL 261
               V   KD   NDR ++
Sbjct: 257 GYRFVRLQKDISHNDRFVI 275


>gi|291454160|ref|ZP_06593550.1| methylase [Streptomyces albus J1074]
 gi|291357109|gb|EFE84011.1| methylase [Streptomyces albus J1074]
          Length = 285

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            AI R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 60  EAIARREAREPLQHITGLAYFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 115

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL +G+GA+ LAL +E P      V++S  AL   + N   +    R    Q D 
Sbjct: 116 EPLVVDLCSGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEGS----RVHLHQGDA 171

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           F ++   +G  D+++SNPPYI     + +  E RD DP+++L  G DGL   R I     
Sbjct: 172 FGALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAH 231

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           R L   G+  VE    Q   V  IF   K
Sbjct: 232 RLLRPGGIVVVEHADTQGGQVPWIFTEEK 260


>gi|16080753|ref|NP_391581.1| glutamine methylase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311661|ref|ZP_03593508.1| hypothetical protein Bsubs1_20001 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315989|ref|ZP_03597794.1| hypothetical protein BsubsN3_19922 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320900|ref|ZP_03602194.1| hypothetical protein BsubsJ_19865 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325184|ref|ZP_03606478.1| hypothetical protein BsubsS_20026 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313250|ref|YP_004205537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus subtilis BSn5]
 gi|1170229|sp|P45873|HEMK_BACSU RecName: Full=Protein methyltransferase hemK homolog
 gi|853777|emb|CAA89885.1| ywkE [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636225|emb|CAB15717.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. subtilis str. 168]
 gi|291486284|dbj|BAI87359.1| hypothetical protein BSNT_05651 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019524|gb|ADV94510.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus subtilis BSn5]
          Length = 288

 Score = 91.7 bits (226), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 40  NAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           + + R  +H  +H+       I+G   FY     ++ D   PRPETE +V   L      
Sbjct: 51  DELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRPETEEVVFHLLEKYRSV 110

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150
             +   + ++D+GTG+GA+ + L  E+  F    VDIS +AL++A +NA   G + RF  
Sbjct: 111 FSEDGKLEVVDVGTGSGAIAVTLALENQSFSVSAVDISKEALQVASANAEKLGANVRFYQ 170

Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D L+   F       D+IVSNPPYI    +  L   VR  +P  +L  G DGL  Y+  
Sbjct: 171 GDLLEP--FIKAGKKADIIVSNPPYISEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRF 228

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260
            + +   +        EIG+ Q   V   I ++ K   V   KD  G DR +
Sbjct: 229 MEDIPLVMKDKVFVVFEIGWKQGAAVKDLILKAFKGAEVEVLKDINGKDRTI 280


>gi|16330666|ref|NP_441394.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803]
 gi|2829611|sp|P74003|HEMK_SYNY3 RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.Ssp6803HemKP
 gi|1653158|dbj|BAA18074.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803]
          Length = 299

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 90/198 (45%), Gaps = 18/198 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD------SALAFSLPRIEKRDVVRILDLGTGTGA 110
           WRDF    + ++ D   PRPETEL++D      SAL+ S            +DLGTG+GA
Sbjct: 89  WRDFV---IKVTDDVLIPRPETELIIDIVQHEHSALSPS------NCADHWVDLGTGSGA 139

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDV 167
           + L L    P      VD S  AL IA+ NA  N   +R    Q  W+  +E   G    
Sbjct: 140 IALGLAATFPQALVHAVDCSGSALAIARENAQLNQFGDRIQFHQGYWWEPLEHLKGQVQG 199

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +VSNPPYI    +  L  EV   +P ++LDGG DGL     +      +L   G   VEI
Sbjct: 200 MVSNPPYIPQRELAQLQPEVIKHEPLLALDGGPDGLQAVEQLIRRSPTYLKPGGFWLVEI 259

Query: 228 GYNQKVDVVRIFESRKLF 245
              Q   V  +  +   +
Sbjct: 260 MTGQAPMVAELLRASGAY 277


>gi|322792390|gb|EFZ16374.1| hypothetical protein SINV_10611 [Solenopsis invicta]
          Length = 350

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 28/236 (11%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103
           L    +  I+G  DF ++ + L    F PRPETE+LVD    F L R+   + D   IL+
Sbjct: 112 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLSTSQADSCEILE 167

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQSDW-- 157
           +G G+GA+ LAL       K   +D S  A ++   N     ++E+      TL SD   
Sbjct: 168 IGCGSGAISLALAHACKTIKCTAIDASPHACDLTMINRKKLNLTEQITVIHATLNSDASI 227

Query: 158 --FSSVEG---------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              +++ G         LFD ++SNPPY+ +  +  L  E+R ++   +LDGG DGL   
Sbjct: 228 EILNNLNGADNLDLNSRLFDFVISNPPYVPTKTIPELQPEIRIYEDLRALDGGDDGLKVI 287

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
           + +    ++ L   G   +E+  +   + V+ F ++    KL   + +KD+  NDR
Sbjct: 288 KPLLRYAAKALKPGGRLFIEVDPSHP-EYVQFFTNKYSDLKLHHEHTYKDFCNNDR 342


>gi|193216650|ref|YP_001999892.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
 gi|193001973|gb|ACF07188.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
          Length = 235

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 24/249 (9%)

Query: 23  IVDPDSVLDDRQRFFL----TNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           ++D   +L +++R+ L    +N  ++ LK +  + +I+G+++  NV + LS     PR E
Sbjct: 1   MIDKHILLREKERYNLPLEISNKELKLLKKDCPVQKIIGYQEMQNVFIDLSYKVLIPRYE 60

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE L+ S+  +    + K    ++LDLG G+G + LA+ K    +  + VDIS +A++ +
Sbjct: 61  TEELIISSYQY----LNKNS--KVLDLGCGSGFIGLAIKKNIGCYVTL-VDISKQAIKQS 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           + NA  N +  +   ++S+WFS+V+    FDVIVSNPPY+         L    ++P+I+
Sbjct: 114 ELNAKLNNLDVKI--IKSNWFSNVKNDERFDVIVSNPPYLNRKNHFAKSL---SYEPKIA 168

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L     GL  Y  I      +LN+ G    EI  N       IF  +    V   KD  G
Sbjct: 169 LFAKKSGLFSYMQILKKAKNYLNESGKLIFEIDQNS-----AIFLKQNYPKVIVKKDING 223

Query: 256 NDRVLLFCR 264
            DR+ +  +
Sbjct: 224 KDRIAILQK 232


>gi|322804408|emb|CBZ01958.1| methylase of polypeptide chain release factors [Clostridium
           botulinum H04402 065]
          Length = 283

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|311113381|ref|YP_003984603.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC
           17931]
 gi|310944875|gb|ADP41169.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC
           17931]
          Length = 313

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 10/213 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   FY++ + +    F PRPETELLV+ AL   L   E     R++DL TG+G
Sbjct: 99  PLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEALRV-LATYESNARPRVVDLCTGSG 157

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166
           A+  A+ +E+P  +   V++S +AL  A+ N     V      +  D  +S+E   G FD
Sbjct: 158 AIAAAVKEENPQAEVFAVELSEQALLWARKNLDPQNVH----LIPGDIRTSLEDLPGYFD 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +++SNPPYI         LEV ++DP+++L  GG DG+   R +       L   G   +
Sbjct: 214 LVLSNPPYIPP-HRKPQALEVAEYDPQMALYGGGEDGMEIPREVIARAHYLLRPGGFFMM 272

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           E   +Q+  V     ++    + + +D  G  R
Sbjct: 273 EHDDSQETRVTETLAAQGFVSIYSIRDLNGKPR 305


>gi|120405292|ref|YP_955121.1| HemK family modification methylase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119958110|gb|ABM15115.1| modification methylase, HemK family [Mycobacterium vanbaalenii
           PYR-1]
          Length = 272

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 119/263 (45%), Gaps = 16/263 (6%)

Query: 6   DSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNV 63
           D+      VTG    +V  V PD     R R  +T    R  L+H     + G   F  V
Sbjct: 20  DAELLAAHVTGTERGRVAFVQPDDAFAARYRELVTARAERVPLQH-----LTGTAAFGPV 74

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +    F PRPETE +++ A+A  LP        RI+DL TG+GA+ LAL    P  +
Sbjct: 75  TVQVGPGVFVPRPETESVLEWAVAQPLPARP-----RIVDLCTGSGALALALAVAFPAAQ 129

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              VD S  AL+ A+ N   + V   R D       + ++G  D++V+NPPYI +  +  
Sbjct: 130 VTAVDDSEAALDYARGNVADSSVQLVRADVTAPGLLADLDGSVDLLVANPPYIPAGAL-- 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  +DP  +L GG DG+S    I D  +R L   G C+VE         V  F   
Sbjct: 188 LEPEVAQYDPAHALFGGADGMSVIGPIVDAAARLLRPGGRCAVEHDDTTSEQTVAAFTRD 247

Query: 243 KLFL-VNAFKDYGGNDRVLLFCR 264
             F+ V A  D  G  R +   R
Sbjct: 248 GGFVDVTARHDLAGRPRFVTAVR 270


>gi|294626138|ref|ZP_06704745.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294665202|ref|ZP_06730501.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599587|gb|EFF43717.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605025|gb|EFF48377.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 286

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 114/224 (50%), Gaps = 8/224 (3%)

Query: 40  NAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           +A+VR  +  E +  + G R F+ + L +S  T  PR +TE LV+     +L R++    
Sbjct: 58  DALVRRREAGEPVAYLTGARGFWTLELAVSPATLIPRADTETLVE----LALERLDTLPG 113

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+ DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA ++G+      L S WF
Sbjct: 114 RRVADLGTGSGAIALAIASERPQAQVIATDASAAALAMARRNADSHGLHNVECRLGS-WF 172

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL
Sbjct: 173 APLAGETFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVTDAPAHL 231

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
              G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 232 RPGGWLLLEHGWDQGAAVAELLVARGFAAVATHQDLEQRDRVSL 275


>gi|13475623|ref|NP_107190.1| methyl transferase [Mesorhizobium loti MAFF303099]
 gi|14026379|dbj|BAB52976.1| probable methyl transferase [Mesorhizobium loti MAFF303099]
          Length = 230

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALA----FSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           F  + L ++     PRPETELL  +AL      +LP        RI+D+  GTG +  A+
Sbjct: 18  FMGLELLVAPGALVPRPETELLGTTALGVLHQMNLP------APRIVDMCCGTGNLACAI 71

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVS 170
               P  +    D++   +++A+ NA  +G+++R   LQ D F ++ GL      DVIV 
Sbjct: 72  AHHIPAARVWASDLTDGCVDVARRNAAHHGMADRVSVLQGDLFDALSGLGLDRTIDVIVC 131

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGY 229
           NPPYI    ++     + + +PR +   G  GLS H R + D    +L   G+   E+G 
Sbjct: 132 NPPYISEKRLEGDRAHLVELEPREAFAAGPYGLSIHMRVVKD-APLYLRPGGILLFEVGL 190

Query: 230 NQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
            Q   V+ + E  K +  + A  +  G  RV+L
Sbjct: 191 GQDRQVMGLLERSKQYENIRAVSNEAGEGRVVL 223


>gi|125987041|ref|XP_001357283.1| GA21859 [Drosophila pseudoobscura pseudoobscura]
 gi|54645614|gb|EAL34352.1| GA21859 [Drosophila pseudoobscura pseudoobscura]
          Length = 331

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 26/238 (10%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V   +   
Sbjct: 95  LADFERFLEARCARMPLQH-----IIGEWDFLDITLKTAPTVFIPRPETEEFVRLVIE-- 147

Query: 90  LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                 +DV  V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ 
Sbjct: 148 ----NYKDVKHVNMLEVGCGSGAMSLSMLHALPRVEATAIERSKAATVLAAENAKLLGLQ 203

Query: 148 ERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +RF     T++ D +      +  +D+I+SNPPY+++     L  EV  ++   +LDGG 
Sbjct: 204 DRFQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 263

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253
           DGL   R + D   RHL+  G   +E+G N+   +V+      +E R  F+ + +  Y
Sbjct: 264 DGLRVARLVFDLACRHLHSGGKLWLELG-NEHPPLVKTIMHLKYEGRLNFVGSYYDQY 320


>gi|116494652|ref|YP_806386.1| methylase of polypeptide chain release factor [Lactobacillus casei
           ATCC 334]
 gi|116104802|gb|ABJ69944.1| Methylase of polypeptide chain release factor [Lactobacillus casei
           ATCC 334]
          Length = 276

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 8/201 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E    I+G   F+     ++     PR ETE LV  A        E+R     
Sbjct: 61  VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWAAE------EQRTAQTG 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ L L ++ P       D+S +AL +AK NA    V+ +F    SD F+++
Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 172

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              +D +V+N PYI       +      ++P+++L  G  GL+ +      + +HL   G
Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232

Query: 222 LCSVEIGYNQKVDVVRIFESR 242
              +E GY Q+  +  +F  +
Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253


>gi|71894204|ref|YP_278312.1| protoporphirogen oxidase HemK [Mycoplasma synoviae 53]
 gi|71850992|gb|AAZ43601.1| Protoporphirogen oxidase HemK [Mycoplasma synoviae 53]
          Length = 241

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K+  I +I+G  +  NV++ LS     PR ETE ++  A  +    I+     ++LDL T
Sbjct: 28  KNYPIQKIIGHVEMLNVKIDLSYKVLIPRYETEEVILKAFEY----IKNDSSFKVLDLAT 83

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + LA+ K+    K    DIS  AL  A  NA  N +      + S+WFS+V   F+
Sbjct: 84  GSGFIALAIKKKFSSAKIYASDISKIALRQASKNAQINKLD--IGLIHSNWFSNVNQKFN 141

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +I+ NPPYI     + L   ++ ++P+ +L    DG   Y+ I     ++L  + L   E
Sbjct: 142 LIICNPPYIGK--YEELSESIKKYEPKKALYAKDDGFYFYKKIISQAPKYLQNEKLLIFE 199

Query: 227 IG 228
           + 
Sbjct: 200 LS 201


>gi|319955750|ref|YP_004167017.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Cellulophaga algicola DSM 14237]
 gi|319424410|gb|ADV51519.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga algicola DSM 14237]
          Length = 283

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL    + ++P+ ++       L  A+ +   H  +  I+G  +F ++   ++     PR
Sbjct: 36  GLQRFVLAMEPNLIVAKEDESPLFEALSKLKLHVPVQYIIGKTEFMDLEFIVNEHVLIPR 95

Query: 76  PETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PETE LV   L      IE     ++ILD+GTG+G + ++L K  P  K   +D+S KA+
Sbjct: 96  PETEELVRWILG----DIEDHHSKLKILDIGTGSGCIPISLAKHLPNSKVYTLDVSGKAI 151

Query: 135 EIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            +AK NA  N V+   D +Q       +++  FD+IVSNPPY+  +    +   V  ++P
Sbjct: 152 AVAKQNARLNKVA--IDFIQESILDIETLQEEFDIIVSNPPYVRELEKAAMNANVLKYEP 209

Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            ++L     + L  Y+ I D  + +L K G    EI      +   +        +   +
Sbjct: 210 GLALFVADNNPLLFYKKITDFAAHNLVKKGKLYFEINQYLGKETELLLGEHNFSDIELRQ 269

Query: 252 DYGGNDRVL 260
           D  GNDR+L
Sbjct: 270 DVFGNDRML 278


>gi|262195717|ref|YP_003266926.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliangium ochraceum DSM 14365]
 gi|262079064|gb|ACY15033.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliangium ochraceum DSM 14365]
          Length = 288

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V G    ++ +D +  L D +       I R L  E +  ++G ++F+++  
Sbjct: 29  EAQVLLAHVLGCDRTRLYMDFEKPLGDDELASYRGLIQRRLSGEPVAYLVGHQEFWSLSF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124
            +  +   PR +TE +++  L     +I  RD  +RI D+ TG+GA+ + L  E P    
Sbjct: 89  QVGPEVLIPRRDTETVIEQVLD----QIGARDAALRIADVATGSGAIAITLAHELPSASV 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           +  D+S  A  +A  NA  N V  R +    D  + +  E  FDV+VSN PY+ +  ++ 
Sbjct: 145 IATDLSQAAAAMATDNAARNQVDARVEVRVGDLLAPLAGEAPFDVLVSNLPYVPAGDIEG 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV+  +PR++LDGG DGL   R +       L+  GL  +E G++Q   V  + ++ 
Sbjct: 205 LAPEVQR-EPRLALDGGDDGLHLLRRLIADAPALLSDTGLLVLEHGFDQDAAVRALIDAT 263

Query: 243 KLFLVNAFK-DYGGNDRV 259
             F     + D G   RV
Sbjct: 264 GAFEPAQTRLDLGKQPRV 281


>gi|260814059|ref|XP_002601733.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae]
 gi|229287035|gb|EEN57745.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae]
          Length = 287

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 20/230 (8%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDVVR 100
           + +    I  ILG  DF ++ L +    F PRPETE LV+    +    L R E+   + 
Sbjct: 63  KRMNRMPIQYILGEWDFRDLNLVMRPPVFIPRPETEELVEHLWLYLQEDLSREEEE--LG 120

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           IL++G G+GA+ L+LL E P      VD++ +A+E+ + NA   G+ +R + ++    S 
Sbjct: 121 ILEVGCGSGAISLSLLHEFPQAHCTAVDVTKEAVELTQHNAERLGLCDRLNIIKFIVLSL 180

Query: 160 -------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                    E  FDVIVSNPPYI +  +  L  E+  ++   +L GG DG+   R I   
Sbjct: 181 NDIVFPADFETKFDVIVSNPPYIWTQDMGTLEQEIVGYENHCALHGGTDGMGLIRDIIHT 240

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
             + L   G   +E+   +  D+++ + +     +L L   ++D+  N+R
Sbjct: 241 GHKLLKPGGSIWLEVD-PRHPDMIQTYLNNHLQYQLHLAGVYQDF--NER 287


>gi|260440119|ref|ZP_05793935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|291043407|ref|ZP_06569128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|291012643|gb|EFE04628.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
          Length = 303

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAYHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   R I
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGLDVTRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|111018483|ref|YP_701455.1| HemK family methyltransferase [Rhodococcus jostii RHA1]
 gi|110818013|gb|ABG93297.1| probable methyltransferase, HemK family protein [Rhodococcus jostii
           RHA1]
          Length = 309

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 17/246 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +SV+D  ++     A     K   +  ILG     ++ + +    F PRPETELL+  AL
Sbjct: 52  ESVIDAYKKMVDQRA-----KRIPLQYILGTAAMGDIDIEVGPGVFVPRPETELLLGWAL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF L   ++   V +LDL TG+GA+ LA+    P      V++   AL  A+ NA     
Sbjct: 107 AF-LGSCDQHPPV-VLDLCTGSGALALAIANARPDAVVHAVELEPHALAWARRNADAREQ 164

Query: 147 SE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +        + D       + +EG  D+IV+NPPYI   +   L  EV D DP  +L  G
Sbjct: 165 AGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEGVE--LEPEVADHDPHSALFAG 222

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
            DGLS  + +   V+R L   G   +E   +   DV  +F SR++F  V    D  G  R
Sbjct: 223 PDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGADVAALFASRRVFGEVAEHPDLAGKPR 282

Query: 259 VLLFCR 264
            ++  R
Sbjct: 283 FVVARR 288


>gi|153937927|ref|YP_001389501.1| HemK family modification methylase [Clostridium botulinum F str.
           Langeland]
 gi|152933823|gb|ABS39321.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum F str. Langeland]
 gi|295317602|gb|ADF97979.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum F str. 230613]
          Length = 283

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|313679786|ref|YP_004057525.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Oceanithermus profundus DSM 14977]
 gi|313152501|gb|ADR36352.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Oceanithermus profundus DSM 14977]
          Length = 277

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 8/206 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  ++   L   TG    +   +  + L+  Q   L  A+ R    E +  ILG   F 
Sbjct: 23  QAEAEARQLLEHATGAQGARFWREARAALEPAQERLLEEALARRAAGEPLQLILGTAVFC 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +      PRPETE LV+     +L R+ +    R+LD+GTG GA+ LAL +  P 
Sbjct: 83  GLELEVRPGVLVPRPETERLVE----LALERLPESGPARVLDVGTGGGAIALALKQARPE 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 ++S  ALE+A++NA   G++  F  L +   + +  L D+IVSNPPY+     +
Sbjct: 139 LDVYASEVSEAALELARANARRLGLAVTF--LHAPLTAGLWDL-DLIVSNPPYLPEAYRE 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYR 207
               E+  ++   +L  G DGL+  R
Sbjct: 196 AAPPEL-AWEAETALYAGADGLAVAR 220


>gi|15639046|ref|NP_218492.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025286|ref|YP_001933058.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322310|gb|AAC65048.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017861|gb|ACD70479.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 348

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 38/240 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLG 105
           ++F+ +R  ++  T  P+P+TELLV+S LA    ++ K              V++I +  
Sbjct: 94  KEFFGLRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEAC 153

Query: 106 TGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD- 156
           TG G + +AL+     + +P    +  DI  +AL +A+ NA   +    + R   + +D 
Sbjct: 154 TGCGCIAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADV 213

Query: 157 -----WFSSVEGL-----------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                +FS  EG            +DVI +NPPY+ S     L  + R  +P  +LDGG 
Sbjct: 214 RAPIPFFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGA 272

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL   R  A   +  L + G    E+G N      RIF++     V   KD  G +R++
Sbjct: 273 DGLDLVRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 332


>gi|291059467|gb|ADD72202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 338

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 38/240 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLG 105
           ++F+ +R  ++  T  P+P+TELLV+S LA    ++ K              V++I +  
Sbjct: 84  KEFFGLRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEAC 143

Query: 106 TGTGAVCLALL-----KESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD- 156
           TG G + +AL+     + +P    +  DI  +AL +A+ NA   +    + R   + +D 
Sbjct: 144 TGCGCIAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADV 203

Query: 157 -----WFSSVEGL-----------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                +FS  EG            +DVI +NPPY+ S     L  + R  +P  +LDGG 
Sbjct: 204 RAPIPFFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGA 262

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL   R  A   +  L + G    E+G N      RIF++     V   KD  G +R++
Sbjct: 263 DGLDLVRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 322


>gi|318061362|ref|ZP_07980083.1| methytransferase [Streptomyces sp. SA3_actG]
          Length = 314

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  ++G   F+ +R+ +    F PR  +E LV  ALA     +     V +
Sbjct: 50  VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLVARALAG----VRAEGAVTL 105

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL  G+GA+ LAL     P       D+   AL  A+ N    G       L +   ++
Sbjct: 106 LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+ +N PY+ S  V  L  E R  +P ++LDGG DGL   R +A+  +  L   
Sbjct: 166 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPG 225

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           G   VE G  Q  +V  IF +  L    A ++ G
Sbjct: 226 GRLLVESGERQAPEVAGIFMAAGLHAEIAHEEEG 259


>gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria flavescens SK114]
 gi|241319136|gb|EER55614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria flavescens SK114]
          Length = 299

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ +R
Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  ++  +D+IVSNPPY+++  V+ L  E    +P+++L  G DGL   R I
Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPKLALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +++LN  G+  VEIG+N++V
Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265


>gi|296331339|ref|ZP_06873811.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305676325|ref|YP_003867997.1| glutamine methylase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151454|gb|EFG92331.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414569|gb|ADM39688.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 288

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 13/248 (5%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHR-------ILGWRDFYNVRLTLSSDTFEPRP 76
           +D   +L   Q     + + R  +H  +H+       I+G   FY     ++ D   PRP
Sbjct: 35  MDRSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKEFFYGREFMVNDDVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE +V   L        +   + ++D+GTG+GA+ + L  E+  F    VDIS +AL++
Sbjct: 95  ETEEVVYHLLEKYRHVFSEDSRLEVVDVGTGSGAIAVTLALENKNFSVSAVDISKEALQV 154

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           A +NA T G    F   Q D       EG   D++VSNPPYI    +  L   VR  +P 
Sbjct: 155 ASANAETLGADVHF--YQGDLLEPFIKEGKKADIVVSNPPYISEGEMADLSEIVRFHEPL 212

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKD 252
            +L  G DGL  Y+   + +   +        EIG+ Q   V   I ++ K   V   KD
Sbjct: 213 HALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWQQGAAVKELILKTFKGAEVEVLKD 272

Query: 253 YGGNDRVL 260
             G DR +
Sbjct: 273 INGKDRTI 280


>gi|300088067|ref|YP_003758589.1| protein-(glutamine-N5) methyltransferase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527800|gb|ADJ26268.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 273

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 11/235 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  +TGL+   +   P+  L   +       + R    E +  + G  +FY +  
Sbjct: 22  EAEILIAHITGLTRAGIHAHPERELTAAEEARYRALLERLSAGEPLQYLTGKMEFYGLEF 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE++ + AL  +    +  D   I D+G G+GA+ + L    P     
Sbjct: 82  EVNPSVLVPRPETEIMAERALNIA----KGYDRPAIADIGCGSGALAVTLAVRLPRSTVT 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             DIS  ALE A+ NAV + V+      +S+  S +  L FD+I +N PY+ S  V    
Sbjct: 138 AADISPTALETARRNAVRHHVAN-IGFRKSELLSGLTDLNFDIICANLPYVPSAEVSA-- 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                F+PR++LDGG DGL   R +   ++    +     +E G  Q   V R+ 
Sbjct: 195 ---NRFEPRLALDGGTDGLDLIRRLLAQIAGLPRRPDWLLLEFGTGQAAGVKRLI 246


>gi|311694730|gb|ADP97603.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine bacterium HP15]
          Length = 300

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 9/205 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L   +R  +   I R +     +  +LG   F  +   +      PR     L+++ 
Sbjct: 60  DARLTREERELVLERIARRVDERVPLAYLLGEAWFMGMPFHVDERVLVPRSPIGELIENG 119

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVT 143
                P +  + V RILDL TG+G  C+ +   S F +      DIS  ALE+A+SN   
Sbjct: 120 FQ---PWLGDKPVERILDLCTGSG--CIGIGAASVFGEAEVDLSDISPDALEVAESNIDL 174

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +GV ER  T+QSD F ++EG +DVIVSNPPY+++  +  +  E R  +P + L  G DGL
Sbjct: 175 HGVRERVRTVQSDVFDNIEGRYDVIVSNPPYVDADDLSSMPDEYR-HEPELGLAAGKDGL 233

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
                I    + HL   GL  VE+G
Sbjct: 234 DIAHRIIAKAAEHLTPGGLLVVEVG 258


>gi|187777271|ref|ZP_02993744.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC
           15579]
 gi|187774199|gb|EDU38001.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC
           15579]
          Length = 292

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 116/242 (47%), Gaps = 7/242 (2%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ +PD  + + ++      I        +  ILG  +F  +   +      PRP+TE+L
Sbjct: 50  ILTNPDYHIKEEEKKKYFQLIDLRKNKMPMKYILGTTEFMGLDFNIKKGVLIPRPDTEIL 109

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++ L      I+ ++  +I D+  G+G + + +       + +  DI        K N 
Sbjct: 110 VETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEIICYDIEDVPYNTTKENI 165

Query: 142 VTNGVSERFDTLQSDWFS-SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           + + + +R   L+SD  + +++G   FD+IVSNPPYI   +++ L  +V+ ++P  +L G
Sbjct: 166 LKHNLQDRIKVLKSDLLTEAIKGKRKFDIIVSNPPYIREDVIETLMDDVKKYEPFEALCG 225

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DGL  Y  I       LN  G  + EIGY+QK+ V  I        +   KD  G DR
Sbjct: 226 GKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILHEYGFKDILCIKDLAGKDR 285

Query: 259 VL 260
           V+
Sbjct: 286 VI 287


>gi|170756524|ref|YP_001779765.1| HemK family modification methylase [Clostridium botulinum B1 str.
           Okra]
 gi|169121736|gb|ACA45572.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B1 str. Okra]
          Length = 283

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKDKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLEDRVKVLKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|226354990|ref|YP_002784730.1| hypothetical protein Deide_01670 [Deinococcus deserti VCD115]
 gi|226316980|gb|ACO44976.1| putative methyltransferase, HemK family [Deinococcus deserti
           VCD115]
          Length = 284

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 11/224 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIV-DPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+ + L    GLS   +++  P+ VL DD  R  L   + +      +  +LG  ++  V
Sbjct: 26  DARALLEHALGLSPTGLLLRGPEQVLPDDAAR--LNGLLEKRAARVPLQHLLGEVEWGGV 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L   +    PRPETE L    L  SL  +    + R+LD+GTG+GA+ L L    P  +
Sbjct: 84  HLRSDTRALIPRPETEWL----LHLSLQDLSAVSLPRVLDVGTGSGALALGLKAARPDAQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DIS +AL +A+ N+  NG+   F  +Q    + + G FD+IVSNPPY+        
Sbjct: 140 VWATDISPEALTLAQENSARNGLEVTF--VQGSLLAGLAGPFDLIVSNPPYLPESDRLEA 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             EV+  DP ++L  G DGL   R +A   +  L       +E+
Sbjct: 198 DPEVK-HDPALALYAGTDGLELARPLAAQAAGALTPGAPLWLEL 240


>gi|226947361|ref|YP_002802452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A2 str. Kyoto]
 gi|226841044|gb|ACO83710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A2 str. Kyoto]
          Length = 283

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMRLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD  G DRV+
Sbjct: 261 GFKDVLCIKDLAGKDRVI 278


>gi|163840179|ref|YP_001624584.1| peptide release factor-glutamine N5-methyltransferase
           [Renibacterium salmoninarum ATCC 33209]
 gi|162953655|gb|ABY23170.1| peptide release factor-glutamine N5-methyltransferase
           [Renibacterium salmoninarum ATCC 33209]
          Length = 300

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 10/214 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G   F ++ L +    F PRPE+E +   A+ F   ++E    V ++DLGTG+GA
Sbjct: 72  LQHLTGVAYFRHLELAVGPGVFIPRPESEGVAQLAINFLAAQVELTAPV-VVDLGTGSGA 130

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEGLFDVI 168
           +  A+  E P  +   V++S  A + A  N    G  V  R   L+S  F  ++GL DV+
Sbjct: 131 LAAAIASEVPGSRVFAVELSDLAHDWAARNLARYGAQVELRLGDLRSA-FEDLDGLADVV 189

Query: 169 VSNPPYI--ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSV 225
           +SNPPYI  E+V  +    EV + DP I+L GG  DGL   R       R L   GL  +
Sbjct: 190 LSNPPYIPDEAVPNEP---EVAEHDPEIALYGGWADGLELPRAALASAVRLLKPGGLFVM 246

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           E    Q   +VR+FE+     V    D  G +R 
Sbjct: 247 EHAEVQAATMVRLFENAGFGYVEGHLDLTGKERA 280


>gi|226323867|ref|ZP_03799385.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758]
 gi|225207416|gb|EEG89770.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758]
          Length = 128

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           GVS ++  +Q+D F ++ G FD+I SNPPYI + +++ L  EVR  DP  +LDG  DGL 
Sbjct: 6   GVSGKW--IQTDMFENITGTFDMITSNPPYIPTKVIEELEAEVRLHDPYEALDGKEDGLY 63

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            YR +A+ V  +L   G   +EIGY+Q  DV ++ +      V+  KD  G DRV+
Sbjct: 64  FYRILAEKVPEYLTDGGWLVMEIGYDQSADVEKLLKETGFEQVSTQKDLAGLDRVV 119


>gi|63852198|dbj|BAD98450.1| HemK protein [Desulfovibrio vulgaris]
          Length = 335

 Score = 90.9 bits (224), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 110/266 (41%), Gaps = 56/266 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E    ILG R+FY     ++  T  PRPETELLV++AL+ + PR          D GTGT
Sbjct: 72  EPTAHILGEREFYGRDFLVTPATLIPRPETELLVETALSLA-PR-----TAFFADCGTGT 125

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN------------------------ 144
           G +   L  E    +G+  DIS  AL +A  N VT+                        
Sbjct: 126 GCIAATLCAERDDLRGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQ 185

Query: 145 --------GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
                      +R   + +D+   +  +G  D++VSNPPY+       L  EVRD +PR 
Sbjct: 186 NAQSAARRAAFQRCQPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRS 245

Query: 195 SL--------------DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +L               G  DGL H R +     R L   GL  +E G  Q   V  +F+
Sbjct: 246 ALVPCAGEGLDDAAAAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQ 305

Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264
             SR    V+  +D    DR ++  R
Sbjct: 306 PCSRLWAQVDIRRDLARLDRYVVARR 331


>gi|227889714|ref|ZP_04007519.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227849578|gb|EEJ59664.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 287

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 16/199 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV     ++L  IE     +ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELV----KWALENIESGK--KILDLGTGSG 120

Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           A+ +AL+K++   +G+        DI+  AL  ++ N +   +  +  T +++    +E 
Sbjct: 121 AIMVALVKQAQK-QGIQNLNLYASDITDSALRESEENFLKYDLDVK--TRKANVLVGLEK 177

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+I+SNPPYI+    + +   V   +P  +L GG DGL  YR  A  V  HLN  G  
Sbjct: 178 -FDMIISNPPYIKMSEKNLMDENVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQF 236

Query: 224 SVEIGYNQKVDVVRIFESR 242
            +E G+++K  +  +FE+ 
Sbjct: 237 FLEFGFSEKEQLKELFETE 255


>gi|295836497|ref|ZP_06823430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
 gi|197699009|gb|EDY45942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
          Length = 281

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V  +   ++   PD+  D R       AI R    E +  I G   F  + L
Sbjct: 26  DAEELAAYVHDVKRGELHTVPDADFDAR----YWEAIARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETE    S + +++  +   DVV   ++DL TG+GA+ LAL +E P   
Sbjct: 82  QVGPGVFVPRPETE----SVVGWAIDAVRAMDVVEPLVVDLCTGSGAIALALAQEVPRST 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              V++S  AL   + N   +    R    Q D F+++   +G  D+++SNPPYI     
Sbjct: 138 VHAVELSEDALVWTRRNVEGS----RVHLHQGDAFAALPELDGQVDLVISNPPYIPLTEW 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +  E RD DP ++L  G DGL   R I     R L   G+  VE    Q   V  +F 
Sbjct: 194 EYVAPEARDHDPEMALFSGEDGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLFT 253

Query: 241 SRK 243
             +
Sbjct: 254 EER 256


>gi|53711799|ref|YP_097791.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46]
 gi|52214664|dbj|BAD47257.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46]
          Length = 278

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     ++   
Sbjct: 30  CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       D+S 
Sbjct: 90  LIPRPETEELVDLVVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143

Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA  N   +  GV  E+ D L ++     +  +D+IVSNPPY+     + +   V 
Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVDDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++PR++L   D   D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|302542527|ref|ZP_07294869.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460145|gb|EFL23238.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces himastatinicus ATCC 53653]
          Length = 281

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 9/207 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
              I+DL TG+GA+ LAL +E P  +   V++   AL  A+ N   + V  +R D L + 
Sbjct: 112 EPLIVDLCTGSGAIALALAQEVPRSRVHAVELDEGALLWARKNVEGSRVVLQRGDALTA- 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D+++SNPPYI     + +  E RD DP+++L  G DGL   R +     R 
Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDGLDVIRGLERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E    Q   V  IF   +
Sbjct: 230 LRPGGVVVIEHADTQGGQVPWIFTEER 256


>gi|315126139|ref|YP_004068142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas sp. SM9913]
 gi|315014653|gb|ADT67991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas sp. SM9913]
          Length = 311

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 8/176 (4%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCL 113
           + W  F N+   +      PR     L+++      P +EK + V RILDL TG+G + +
Sbjct: 101 IAW--FANMPFYVDERVLIPRSPFAELINNRFT---PWLEKPESVGRILDLCTGSGCIAI 155

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           AL +     +   VDIS +ALE+A  N     +S+R   +QSD FS V G  +D+IV+NP
Sbjct: 156 ALAQAFENAQVDAVDISYEALEVADINITDYQLSDRVLPIQSDVFSGVPGQKYDLIVANP 215

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY+++  +  L  E    +P + L  G DGL   RTI D  S HL  +GL  VE+G
Sbjct: 216 PYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILDQASEHLTDNGLLFVEVG 270


>gi|300741301|ref|ZP_07071322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia dentocariosa M567]
 gi|300380486|gb|EFJ77048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia dentocariosa M567]
          Length = 313

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 10/224 (4%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           T  + R  +   +  I G   FY++ + +    F PRPETELLV+ AL   L   E    
Sbjct: 88  TELLERRAQRVPLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEALRV-LATYESNAR 146

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R++DL TG+GA+  A+ +E+P  +   V++S +AL  A+ N     V      +  D  
Sbjct: 147 PRVVDLCTGSGAIAAAIKEENPQAEVFAVELSEQALLWARKNLDPQNVH----LIPGDIR 202

Query: 159 SSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVS 214
           +S+E   G FD+++SNPPYI          EV ++DP+++L  GG DG+   R +     
Sbjct: 203 TSLEDLPGYFDLVLSNPPYIPP-HRKPQAPEVAEYDPQMALYGGGEDGMEIPREVIARAH 261

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             L   G   +E   +Q+  V     ++    + + +D  G  R
Sbjct: 262 YLLRPGGFFMMEHDDSQETRVAETLAAQGFVSIYSIRDLNGKPR 305


>gi|218886540|ref|YP_002435861.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757494|gb|ACL08393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 369

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 110/266 (41%), Gaps = 56/266 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E    ILG R+FY     ++  T  PRPETELLV++AL+ + PR          D GTGT
Sbjct: 106 EPTAHILGEREFYGRDFLVTPATLIPRPETELLVETALSLA-PR-----TAFFADCGTGT 159

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN------------------------ 144
           G +   L  E    +G+  DIS  AL +A  N VT+                        
Sbjct: 160 GCIAATLCAERDDLRGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQ 219

Query: 145 --------GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
                      +R   + +D+   +  +G  D++VSNPPY+       L  EVRD +PR 
Sbjct: 220 NAQSAARRAAFQRCQPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRS 279

Query: 195 SL--------------DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +L               G  DGL H R +     R L   GL  +E G  Q   V  +F+
Sbjct: 280 ALVPCAGEGLDDAAAAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQ 339

Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264
             SR    V+  +D    DR ++  R
Sbjct: 340 PCSRLWAQVDIRRDLARLDRYVVARR 365


>gi|229489932|ref|ZP_04383785.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodococcus erythropolis SK121]
 gi|229323033|gb|EEN88801.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodococcus erythropolis SK121]
          Length = 310

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 12/231 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + + +K   +  I+G     N+ + +    F PRPETELL+  AL+F      K  VV  
Sbjct: 62  VAQRVKRIPLQHIIGVASMGNIDVAVGPGVFIPRPETELLMGWALSFLEGCGSKPPVV-- 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQ 154
           LDL TG+G + L++ +  P      V+    AL  A+ NA     +        + D   
Sbjct: 120 LDLCTGSGVLALSIAEARPDAVVHAVEKEPAALVWARRNAADREAAGDTPIHLHQGDVTD 179

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    +EG  D++VSNPPYI       L  EV D+DP  +L GG+DGLS  + +   ++
Sbjct: 180 RNLLPGLEGGVDLVVSNPPYIPEGA--QLQPEVMDYDPHTALFGGVDGLSVIKPMISNIA 237

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           R L   G   +E        V  +F +R++F  V    D  G  R ++  R
Sbjct: 238 RWLRIGGAAGIEHDDTNGDGVAALFSARRVFGEVAQHPDLAGRPRFVVARR 288


>gi|114777341|ref|ZP_01452338.1| hemK protein [Mariprofundus ferrooxydans PV-1]
 gi|114552123|gb|EAU54625.1| hemK protein [Mariprofundus ferrooxydans PV-1]
          Length = 279

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 7/188 (3%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  I G ++F++    +S D   PRPETE L+++ LA   P  ++    +  D
Sbjct: 64  RRLAREPLAYITGEKEFWSRPFRVSPDVLIPRPETEHLIEAVLA-RFP--DQSAPYQFCD 120

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           +GTG+G + + L  E P       DIS  +L +A++NA    V+ R      D   +++ 
Sbjct: 121 IGTGSGCIAVTLAAEYPHAAVTATDISEASLRMAQTNAAALNVASRLAWRSGDLLQALQP 180

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G FDV++SNPPY+ S  +  L  E+   +PR +L    DGL    TI +     L   
Sbjct: 181 EDGPFDVVISNPPYVSSDEMHGLEPELA-LEPRHALTDEADGLQLLATILNDAPVCLKPH 239

Query: 221 GLCSVEIG 228
           G   VE G
Sbjct: 240 GYIIVETG 247


>gi|60680030|ref|YP_210174.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC
           9343]
 gi|60491464|emb|CAH06214.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC
           9343]
          Length = 278

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     ++   
Sbjct: 30  CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       D+S 
Sbjct: 90  LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143

Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA  N   +  GV  E+ D L ++     +  +D+IVSNPPY+     + +   V 
Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++PR++L   D   D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|195156175|ref|XP_002018976.1| GL26107 [Drosophila persimilis]
 gi|194115129|gb|EDW37172.1| GL26107 [Drosophila persimilis]
          Length = 330

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 22/236 (9%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V       
Sbjct: 94  LADFERFLEARCARMPLQH-----IIGEWDFLDITLKTAPTVFIPRPETEEFV----RLV 144

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +   +    V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ +R
Sbjct: 145 IENYKNVKHVNMLEVGCGSGAMSLSILHALPRVEATAIERSKAATVLAAENAKLLGLQDR 204

Query: 150 FD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           F     T++ D +      +  +D+I+SNPPY+++     L  EV  ++   +LDGG DG
Sbjct: 205 FQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 264

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253
           L   R + D   RHL+  G   +E+G N+   +V+      +E R  F+ + +  Y
Sbjct: 265 LRVARLVFDLACRHLHSGGKLWLELG-NEHPPLVKTIMHLKYEGRLNFVGSYYDQY 319


>gi|294341236|emb|CAZ89637.1| putative Protein methyltransferase hemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Thiomonas sp. 3As]
          Length = 306

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 16/266 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + +  V G S  Q    P+ +LD  +   L     R L  E +  +LG R+F+ +  
Sbjct: 20  DAQALIEAVLGWSRAQQAAHPERLLDSAELTRLQALATRLLGGEPLAYVLGEREFFGLSF 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TELLV+ +L   L  +        LD+GTG+GA+ +A+    P  +  
Sbjct: 80  EVTPDVLIPRPDTELLVELSLRH-LDALPATHAPTALDMGTGSGAIAIAIAHARPHVRVW 138

Query: 126 GVDISCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176
            +D S  AL +A+ NA               LQS+W+ +++       FD IVSNPPYI 
Sbjct: 139 ALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALQPPATTARFDCIVSNPPYIA 198

Query: 177 SVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +       L     +P ++L G     DGL   R I     R L  DG   +E GY+Q  
Sbjct: 199 AHDPHLPALR---HEPALALTGQHLNPDGLGDLRQIIAQADRFLRDDGCLLLEHGYDQAA 255

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259
            V  + E+     V + +D  G +RV
Sbjct: 256 AVRDLLEAHGYREVFSARDLAGIERV 281


>gi|257457981|ref|ZP_05623140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema vincentii ATCC 35580]
 gi|257444694|gb|EEV19778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema vincentii ATCC 35580]
          Length = 318

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 27/246 (10%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE----KR 96
           A+ R      I  I G +DF+ +   +S D   P+P+TELLV+ +LA    + E      
Sbjct: 66  AVERRSTGLPIAYITGEKDFWGLSFKVSPDVLIPKPDTELLVERSLAVIKEKAEALRPPE 125

Query: 97  DVVRILDLGTGTGAVCLALLK--ESPFFKG---VGVDISCKALEIAKSNA---VTNGVSE 148
             + +LD  TG+G V +++L   E+   +    V VDIS  AL IA+ NA   ++     
Sbjct: 126 QTLYLLDPCTGSGCVAISILYTLEAEGIRNIVCVAVDISPAALAIARLNAERLLSAEAQR 185

Query: 149 RFDTLQSDWFSSVEGL--------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           R   ++ D  S  E +              FD+I +NPPY+ S +   L  + R+ +P +
Sbjct: 186 RLCFIEGDMRSLPETIGGVSQPLSVSKLLRFDLIAANPPYVPSDLTQELLKDGRN-EPAL 244

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +LDGG DGL   R + +     LN  G+   E+G        ++FE+     +   +D  
Sbjct: 245 ALDGGSDGLDFIRILTNNTRTVLNGGGVLLSEVGEYHAQAASKLFETAGFSDIRIHQDLA 304

Query: 255 GNDRVL 260
           G DR++
Sbjct: 305 GQDRLI 310


>gi|226226591|ref|YP_002760697.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226089782|dbj|BAH38227.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 326

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 104/233 (44%), Gaps = 16/233 (6%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E +    G   F  + L +      PRPETE++V  AL  +      R    
Sbjct: 88  ALHRRLAGEPLAYATGSAAFRELVLQVDRRVLIPRPETEVVVGEALRVT----SMRPGGI 143

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA------------VTNGVSE 148
            +D+GTG+GA+ L+L  E  F + V  D+S  AL++AK+NA              +GV+ 
Sbjct: 144 AIDIGTGSGAIALSLAWEGRFDRVVATDLSQDALDVAKANAERLEAMVHGSRHSPHGVAP 203

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               L +D     E    V+VSNPPYI       L   VRD++P ++L     G++ Y+ 
Sbjct: 204 VEFRLGADLAPVTELRARVLVSNPPYIAYDEAHALPSSVRDWEPPVALFAAEQGMARYQA 263

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           I  G    L  DG   +E+   +      +        V+   D  G +RVL+
Sbjct: 264 IVSGARAILEPDGWIVLELDARRAQQTAALARQAGFVDVHVIADLAGRERVLV 316


>gi|226360606|ref|YP_002778384.1| protein methyltransferase HemK [Rhodococcus opacus B4]
 gi|226239091|dbj|BAH49439.1| protein methyltransferase HemK [Rhodococcus opacus B4]
          Length = 309

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 115/246 (46%), Gaps = 17/246 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +SV+D  ++     A     K   +  ILG     ++ + +    F PRPETELL+  AL
Sbjct: 52  ESVIDAYKKMVDQRA-----KRIPLQYILGTAAMGDIDIEVGPGVFVPRPETELLLGWAL 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF L   ++   V +LDL TG+GA+ LA+    P      V++   AL  A+ NA     
Sbjct: 107 AF-LGSCDQHPPV-VLDLCTGSGALALAIANARPDAVVHAVELEPHALAWARRNADAREQ 164

Query: 147 SE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +        + D       + +EG  D+IV+NPPYI   +   L  EV D DP  +L  G
Sbjct: 165 AGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEGVE--LEPEVADHDPHSALFAG 222

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
            DGLS  + +   V+R L   G   +E   +   DV  +F SR++F  V    D  G  R
Sbjct: 223 PDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGSDVAALFASRRVFGEVAEHPDLAGKPR 282

Query: 259 VLLFCR 264
            ++  R
Sbjct: 283 FVVARR 288


>gi|296170241|ref|ZP_06851834.1| protein-(glutamine-N5) methyltransferase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895117|gb|EFG74835.1| protein-(glutamine-N5) methyltransferase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 282

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 14/224 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+      VTG    ++ +   P     DR R    + +    +   +  + G   F  V
Sbjct: 26  DAEELAAHVTGTERGRLTLLESPGEDFLDRYR----DVVAARSRRVPLQHLTGTAAFGPV 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETE L+    A  LP    R V  I+DL TG+GA+ +AL  E P  +
Sbjct: 82  SLHVGPGVFVPRPETEALLAWVTAQPLP---ARPV--IVDLCTGSGALAVALAHEYPAAR 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            V +D+S  AL  A+ NA    V   + D  +    + ++G  D +V+NPPY+    V  
Sbjct: 137 IVAIDVSASALGYARRNAAGTAVELVQADVAEPGLLAELDGGVDAVVANPPYVPDAAV-- 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +  EV   DPR ++ GG DG++    + +  +R L   G+ +VE
Sbjct: 195 VETEVAQHDPRRAVFGGPDGMAVIAPVVELAARWLRPGGVFAVE 238


>gi|29840417|ref|NP_829523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila caviae GPIC]
 gi|29834766|gb|AAP05401.1| modification methylase, HemK family [Chlamydophila caviae GPIC]
          Length = 283

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 17/217 (7%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLG 105
           H S+H       F  + L + S    PR ETELL +  + +    P I+        D+ 
Sbjct: 72  HGSVH-------FLGLHLEVDSRVLIPRMETELLAEQIVKYLSDHPHIQT-----FYDVC 119

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G+G + L++ K  P  + +  DI  KA+ +AK+NA  N ++   + L  D F+      
Sbjct: 120 CGSGCLGLSIKKYCPNIQVILSDICSKAVAVAKTNAFKNNLN--VEILNGDLFAPYSCPG 177

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D  V NPPY+    +  +  EVR  +P  +L GG  GL  Y  IA+ ++  L   G+  +
Sbjct: 178 DAFVCNPPYLSFDEILHVDPEVRCHEPWKALVGGSSGLEFYERIANELNTILLPRGVGWL 237

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           EIGY Q   V RIF +R +   N ++D  G DR+   
Sbjct: 238 EIGYKQGSSVKRIFANRGIS-GNIYQDLSGCDRIFFL 273


>gi|307189800|gb|EFN74072.1| HemK methyltransferase family member 1 [Camponotus floridanus]
          Length = 353

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 28/236 (11%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103
           L    +  I+G  DF ++ + L    F PRPETE+LVD    F L R+   + D   IL+
Sbjct: 115 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLNSLQLDSCEILE 170

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW-- 157
           +G G+GA+ LAL       K   +D S  A ++   N     + N V+    TL+SD   
Sbjct: 171 IGCGSGAISLALAHACEKIKCTAIDTSPYACDLTIINRDKLNLANRVTVIHATLKSDATV 230

Query: 158 --FSSVEG---------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             F  + G         LFD +VSNPPY+ +  +  L  E+R ++   +LDGG DGL   
Sbjct: 231 EVFKELNGASDMDLNLRLFDFVVSNPPYVPTKHISKLQPEIRIYEDLRALDGGDDGLKII 290

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
           + +    ++ L   G   +E+      + ++ F ++    KL   + +KD+  NDR
Sbjct: 291 KPLLKYTAKVLKPGGRLFLEVDPTHP-EYIQFFTNKYPDFKLHHEHTYKDFCNNDR 345


>gi|261400910|ref|ZP_05987035.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria lactamica ATCC 23970]
 gi|269209279|gb|EEZ75734.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria lactamica ATCC 23970]
 gi|309378145|emb|CBX23213.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 305

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 129 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 188

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  + G +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 189 IRLIHTDLFEGLAGTYDLIVSNPPYVDAESVEALPEEYL-HEPELALGSGADGLDATRQI 247

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 248 LLNAAKFLNPKGVLLVEIGHNRDV 271


>gi|118359720|ref|XP_001013098.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89294865|gb|EAR92853.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 564

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 13/162 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ++G  +F ++ L +      PR ET  LV+     S    +++   + L++G GTGA
Sbjct: 11  IQYVIGEWEFRDLLLKMKPPVLIPRNETSYLVELVNKLS----KQKQKCQFLEIGIGTGA 66

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------ERFDTLQSDWFSSV 161
           + L+LLKE+  F G+ +D     +E+AK N   N +          E     Q++   + 
Sbjct: 67  ISLSLLKENSQFTGIAIDKQKFCIELAKQNLNLNKIDPQRLQLIHLECLKFFQNNLNQNP 126

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  FD IVSNPPYI +  V  L  +VR F+ +++LDGG DGL
Sbjct: 127 DQQFDFIVSNPPYIPTSQVQNLDKQVRKFEDKVALDGGSDGL 168


>gi|34497626|ref|NP_901841.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|34103482|gb|AAQ59844.1| probable adenine-specific methylase [Chromobacterium violaceum ATCC
           12472]
          Length = 300

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + L    P  +   VDIS  ALE+A  N    G+ +R
Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQLASHYPDAEVDAVDISLDALEVAAVNVEHYGLQDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + + +D F  +E  +D+I+SNPPY+++  V+ L  E    +P I+L  G DGL   R I
Sbjct: 183 INLIHTDMFEGLEEKYDLIISNPPYVDAESVEELPEEYL-HEPEIALGSGEDGLDATREI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
                  LN+ G+  VEIG+N+ +
Sbjct: 242 LRRAPEFLNERGVLLVEIGHNRDM 265


>gi|261379818|ref|ZP_05984391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria subflava NJ9703]
 gi|284797504|gb|EFC52851.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria subflava NJ9703]
          Length = 299

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ +R
Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  ++  +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +++LN  G+  VEIG+N++V
Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265


>gi|296436464|gb|ADH18634.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/11222]
          Length = 290

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 5/191 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  V L ++     PR ETE+ V+  + +     EK       D+  G+G + L
Sbjct: 69  IHGKVHFLGVELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGL 125

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K  P  +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPP
Sbjct: 126 AVRKHCPHVRVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPP 183

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+          EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  
Sbjct: 184 YLSYKEFFESDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGE 243

Query: 234 DVVRIFESRKL 244
           DV +IF ++ +
Sbjct: 244 DVKQIFHAKGI 254


>gi|225075804|ref|ZP_03719003.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens
           NRL30031/H210]
 gi|224952886|gb|EEG34095.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens
           NRL30031/H210]
          Length = 299

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ +R
Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  ++  +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +++LN  G+  VEIG+N++V
Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265


>gi|312871652|ref|ZP_07731744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 3008A-a]
 gi|311092877|gb|EFQ51229.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 3008A-a]
          Length = 279

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +T  + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGISPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFAIEFKNDLAGKPRMV 274


>gi|226307403|ref|YP_002767363.1| protein methyltransferase [Rhodococcus erythropolis PR4]
 gi|226186520|dbj|BAH34624.1| protein methyltransferase [Rhodococcus erythropolis PR4]
          Length = 310

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 106/231 (45%), Gaps = 12/231 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + + +K   +  I+G     N+ + +    F PRPETELL+  AL+F      K  VV  
Sbjct: 62  VAQRVKRIPLQHIIGVASMGNIDVAVGPGVFIPRPETELLMGWALSFLEGCGSKPPVV-- 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQ 154
           LDL TG+G + L++ +  P      V+    AL  A+ NA     +        + D   
Sbjct: 120 LDLCTGSGVLALSIAEARPDAVVHAVEKEPAALAWARRNAADREAAGDKPIHLHQGDVTD 179

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    +EG  D++VSNPPYI       L  EV D+DP  +L GG DGLS  + +   ++
Sbjct: 180 RNLLPGLEGGVDLVVSNPPYIPEGA--QLQPEVMDYDPHTALFGGTDGLSVIKPMISNIA 237

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           R L   G   +E        V  +F +R++F  V    D  G  R ++  R
Sbjct: 238 RWLRIGGAAGIEHDDTNGDGVAALFSARRVFGDVAQHPDLAGRPRFVVARR 288


>gi|295101444|emb|CBK98989.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii L2-6]
          Length = 311

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 35/264 (13%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  LD  +   L    VR    E +  + G   F +  L +      PR +TE++ ++A 
Sbjct: 47  DRPLDAAEAAKLEELTVRRAAREPLQYLCGSWPFLDFELAVGPGVLCPRADTEVVAETAA 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---------LEIA 137
                 +   +  R LDL  GTG + L + +  P  + V V+ S +A         L + 
Sbjct: 107 EM----LAGVEAPRALDLCAGTGCLGLGVKRLCPAAQVVCVEKSPEAYVYLEKNTRLALK 162

Query: 138 KSNAVTNGV-----------------SERFDTLQSD----WFSSVEGLFDVIVSNPPYIE 176
                T  V                 +   + ++ D    W S  EG  D+IVSNPPY+ 
Sbjct: 163 GRGGSTENVLDASPFEEPAFDWGVKPARAAEPVEGDLFTYWESLPEGQLDLIVSNPPYLT 222

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  EV   +P ++L+ G DGL  Y+ IA+   + L   G  ++EIG+ Q+  V 
Sbjct: 223 AQEMSELQPEVAK-EPAMALEAGEDGLVFYKAIAEHYQKALRPGGALALEIGWQQREAVT 281

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            + E+     +   KD+GGNDR +
Sbjct: 282 ALLEANGWADIACRKDFGGNDRCV 305


>gi|319637772|ref|ZP_07992538.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102]
 gi|317400927|gb|EFV81582.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102]
          Length = 299

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ +R
Sbjct: 123 PWIEHDELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDLSLDALEVAAINIEDYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  ++  +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 183 ISLVHTDLFEGLDETYDLIVSNPPYVDAESVEALPDEYL-HEPELALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               +++LN  G+  VEIG+N++V
Sbjct: 242 ILQAAKYLNPKGVLLVEIGHNREV 265


>gi|238026091|ref|YP_002910322.1| HemK protein [Burkholderia glumae BGR1]
 gi|237875285|gb|ACR27618.1| HemK protein [Burkholderia glumae BGR1]
          Length = 282

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 118/253 (46%), Gaps = 17/253 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G S  Q+I   D+ L+            R    E + +++G R+F+ +  
Sbjct: 21  DARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      ++      +LDLGTG+GAV LA+    P  +  
Sbjct: 81  EVTPDVLIPRPETELLVEAALDA----LDGIAAPAVLDLGTGSGAVALAIAAARPDARVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA       R       L SDW++++     F  IVSNPPYI    
Sbjct: 137 ALDRSAAALAVARRNAARLLDDARPGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V    
Sbjct: 197 PHLDQGDLR-FEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELWIEHGYDQAEAV---- 251

Query: 240 ESRKLFLVNAFKD 252
             R L L   F++
Sbjct: 252 --RALLLQAGFRE 262


>gi|163857113|ref|YP_001631411.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella petrii DSM 12804]
 gi|163260841|emb|CAP43143.1| putative adenine-specific methylase [Bordetella petrii]
          Length = 296

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 96/195 (49%), Gaps = 15/195 (7%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISC 131
           PR     L+D  LA   P +E   V  +LD+ TG+G  CLA+L    F       VD+S 
Sbjct: 109 PRSPIAELLDQGLA---PWVEPESVRAVLDMCTGSG--CLAILAALAFSDARVDAVDVSP 163

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
            ALE+A+ N    G+ +R    +SD F  +    +DVIV NPPY+ S  +  L  E R  
Sbjct: 164 DALEVARRNVADYGLQDRLTLHRSDLFDQLPAAAYDVIVCNPPYVNSASMAALPDEYR-H 222

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P ++L GG DG+   R I     R+L   G+  +EIG+ +       FE+    L   +
Sbjct: 223 EPALALAGGADGMDLVRRILAAAPRYLAPQGVLVLEIGHERP-----HFEAAFPQLQPVW 277

Query: 251 KDY-GGNDRVLLFCR 264
            D    +D++LL  R
Sbjct: 278 LDTEAASDQILLLAR 292


>gi|119944775|ref|YP_942455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychromonas ingrahamii 37]
 gi|119863379|gb|ABM02856.1| adenine-specific modification methylase in HemK family protein
           [Psychromonas ingrahamii 37]
          Length = 303

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L  R+R  L +  IVR  K   +  +     F  +   +   T  PR     L+++ 
Sbjct: 65  DARLTRREREMLVDRIIVRIEKRIPVAYLTNKAWFAGLEFYVDERTLVPRSPIAELIEAH 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A   P ++K    RILDL TG+G + +A     P  +   VDIS  AL++A+ N   +G
Sbjct: 125 FA---PWVDKAPK-RILDLCTGSGCIAIACAYAFPEAEVDAVDISEDALDVAEINIQGHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   +QSD FS +E   +D+IVSNPPY+++  +D L  E +  +P + L  G DGL 
Sbjct: 181 LEQQVFPIQSDLFSGIENEKYDLIVSNPPYVDAQDMDNLPGEYK-HEPELGLACGADGLD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    S  LN++G+  VE+G +Q
Sbjct: 240 LVRKMLSQASSKLNEEGVLFVEVGNSQ 266


>gi|77359928|ref|YP_339503.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874839|emb|CAI86060.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 311

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E   V RILDL TG+G + +AL +     +   VDIS +ALE+A  N     +SER   +
Sbjct: 136 EPESVKRILDLCTGSGCIAIALAQAFENAQVDAVDISYEALEVADINITDYQLSERVLPI 195

Query: 154 QSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           QSD FS V G  +D+I++NPPY+++  +  L  E    +P + L  G DGL   RTI   
Sbjct: 196 QSDVFSGVPGQTYDLIIANPPYVDAEDMADLPREFHH-EPELGLASGHDGLDVTRTILSE 254

Query: 213 VSRHLNKDGLCSVEIG 228
            S+HL  +GL  VE+G
Sbjct: 255 ASKHLTANGLLFVEVG 270


>gi|253998641|ref|YP_003050704.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylovorus sp. SIP3-4]
 gi|253985320|gb|ACT50177.1| modification methylase, HemK family [Methylovorus sp. SIP3-4]
          Length = 304

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I+  ++V    D+ TG+G + + L    P  +   VDIS  AL +A  N    G+ ++
Sbjct: 125 PWIDYPEMVESAADICTGSGCLGVLLAHTFPNAEVDVVDISTDALAVANINIANYGLQDQ 184

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +QSD FS+++G  +D+I+SNPPY+++  +  L  E R+ +P+I+L  G DGL H  T
Sbjct: 185 ITAIQSDMFSALQGKTYDLIISNPPYVDAPSMAQLPEEYRN-EPQIALGSGTDGLEHTHT 243

Query: 209 IADGVSRHLNKDGLCSVEIGYNQ 231
           +      HLN  GL  VEIG+N+
Sbjct: 244 LLREAWHHLNDGGLLIVEIGHNR 266


>gi|313200714|ref|YP_004039372.1| HemK family modification methylase [Methylovorus sp. MP688]
 gi|312440030|gb|ADQ84136.1| modification methylase, HemK family [Methylovorus sp. MP688]
          Length = 304

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I+  ++V    D+ TG+G + + L    P  +   VDIS  AL +A  N    G+ ++
Sbjct: 125 PWIDYPEMVESAADICTGSGCLGVLLAHTFPNAEVDVVDISTDALAVANINIANYGLQDQ 184

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +QSD FS+++G  +D+I+SNPPY+++  +  L  E R+ +P+I+L  G DGL H  T
Sbjct: 185 ITAIQSDMFSALQGKTYDLIISNPPYVDAPSMAQLPEEYRN-EPQIALGSGTDGLEHTHT 243

Query: 209 IADGVSRHLNKDGLCSVEIGYNQ 231
           +      HLN  GL  VEIG+N+
Sbjct: 244 LLREAWHHLNDGGLLIVEIGHNR 266


>gi|296137059|ref|YP_003644301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thiomonas intermedia K12]
 gi|295797181|gb|ADG31971.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thiomonas intermedia K12]
          Length = 306

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 123/266 (46%), Gaps = 16/266 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + +  V G S  Q    P+ +LD  +   L     R    E +  +LG R+F+ +  
Sbjct: 20  DAQALIEAVLGWSRAQQAAHPERLLDTAELTRLHTLATRLRDGEPLAYVLGEREFFGLSF 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TELLV+ AL  +L  +       +LD+GTG+GA+ +A+    P  +  
Sbjct: 80  EVTPDVLIPRPDTELLVEIAL-RNLDALPATHAPTVLDMGTGSGAIAIAIAHARPHVQVW 138

Query: 126 GVDISCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
            +D S  AL +A+ NA               LQS+W+ ++  L     FD IVSNPPYI 
Sbjct: 139 ALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALHPLATTARFDCIVSNPPYIA 198

Query: 177 SVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +       L     +P ++L G     DGL     I     R L  DG   +E GY+Q  
Sbjct: 199 AHDPHLPALR---HEPALALTGQHPNPDGLGDLHQIIAQADRFLRDDGCLLLEHGYDQAA 255

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRV 259
            V  + E+     V + +D  G +RV
Sbjct: 256 AVRDLLEAHGYRKVFSARDLAGIERV 281


>gi|152990781|ref|YP_001356503.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2]
 gi|151422642|dbj|BAF70146.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2]
          Length = 274

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P+  +D +  F L     R L +E I  I+    FY     + +    PRPETE+L+D  
Sbjct: 44  PEEKIDAKPFFELVK---RRLAYEPIEYIIQRVSFYGEEFFIQNGVLIPRPETEILIDEV 100

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                   E R    + ++G G+G +   L  + P  +    DIS KA+  A+ N    G
Sbjct: 101 SK------ELRGDESLAEIGVGSGVISAILKMKFPSLQITATDISDKAIACARKNFQKFG 154

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGID 201
           +    + +Q+D    VE   DVIVSNPPYI        G E    V  ++P  +L GG +
Sbjct: 155 LD--IELVQTDLLDGVEKKIDVIVSNPPYIAK------GFELEPNVAKYEPHEALFGGRE 206

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G    + I D   +   K  + + E+G++QK  +    +SRK   V  FKD  G DR  +
Sbjct: 207 GDEILKKIIDLFLQSSAK--ILACEMGFDQKNAIRDYVKSRKDIDVRFFKDLAGLDRGFI 264

Query: 262 FCR 264
             R
Sbjct: 265 IQR 267


>gi|329119295|ref|ZP_08247982.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327464642|gb|EGF10940.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 299

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 6/144 (4%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P IE  ++V  +LDL TG+G  CLA+     +   V   VDIS  ALE+A  N    G+ 
Sbjct: 123 PWIEYDELVHNVLDLCTGSG--CLAIQAACHYPDAVVDAVDISLDALEVAAVNVEDYGLQ 180

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ER + + +D F  +EG +D+I++NPPY+++  V  L  E R  +P  +L  G DGL   R
Sbjct: 181 ERVNLIYTDLFEGLEGRYDLIITNPPYVDAESVAALPPEYR-HEPEPALGSGEDGLDAVR 239

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ 231
            I    +R LN  G+   EIG+N+
Sbjct: 240 RILPQAARFLNPHGVLLAEIGHNR 263


>gi|254468536|ref|ZP_05081942.1| protein methyltransferase HemK [beta proteobacterium KB13]
 gi|207087346|gb|EDZ64629.1| protein methyltransferase HemK [beta proteobacterium KB13]
          Length = 281

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W  FY     ++S    PRPETEL++D     ++      D V +LDLG G+G++ +++ 
Sbjct: 81  W-SFYGRSFYINSSMLIPRPETELIIDILKEKNILN----DNVELLDLGAGSGSIGISVK 135

Query: 117 KESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD----TLQSDWFSSVEGL-FDVIVS 170
            E+     + + DIS + +   K N       ++FD       S+WF ++  + FD+I+S
Sbjct: 136 LETKNKINLHLSDISKRCVHGIKKNL------QKFDIQAKVYLSNWFENIPNIKFDLIIS 189

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI         L    F+P+ +L    DGL+    I      +LN+ GL  +E GYN
Sbjct: 190 NPPYIS---YKDPHLNELHFEPKRALVSKNDGLADIHKIIKNSIHYLNRQGLIIIEHGYN 246

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           QK +V  IF       V ++KD  G+ R+
Sbjct: 247 QKDEVQEIFNRYNFNQVKSYKDLLGHYRI 275


>gi|227544507|ref|ZP_03974556.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300909305|ref|ZP_07126766.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
           SD2112]
 gi|112943598|gb|ABI26315.1| modification methylase HemK [Lactobacillus reuteri]
 gi|227185530|gb|EEI65601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300893170|gb|EFK86529.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
           SD2112]
          Length = 288

 Score = 90.1 bits (222), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 7/205 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +  +AI R L HE    I+G   FY     ++ +   P  ET  L+D    + L  +  R
Sbjct: 60  WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELID----WVLQEMPSR 115

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            + R+LDLGTG+G + + L  E P +     DIS  AL IA+ N     +      ++SD
Sbjct: 116 PL-RVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAIAQENMAKFNL--ELPLIKSD 172

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +++  +D+IV+NPPYI+      +   V + +P ++L     GL  Y  +     ++
Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAVLENEPALALFASEHGLGFYHRLFKQAGQY 232

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241
           L   G    E GY+Q+  +  +   
Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257


>gi|253564133|ref|ZP_04841590.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947909|gb|EES88191.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301161571|emb|CBW21111.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 638R]
          Length = 278

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     ++   
Sbjct: 30  CDLLGQDAIDYYLGKDITLSVNEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       D+S 
Sbjct: 90  LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143

Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA  N   +  GV  E+ D L ++     +  +D+IVSNPPY+     + +   V 
Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++PR++L   D   D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 202 DWEPRLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|194862510|ref|XP_001970018.1| GG23621 [Drosophila erecta]
 gi|190661885|gb|EDV59077.1| GG23621 [Drosophila erecta]
          Length = 323

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 121/253 (47%), Gaps = 24/253 (9%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S  Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPE
Sbjct: 76  SYDQLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDLTLKTSPSVFIPRPE 129

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE  V       +   +    V +L++G G+GA+ L++L   P  +   ++ S  A  +A
Sbjct: 130 TEEFV----RLVIENYKNAKHVDLLEVGCGSGAMSLSMLHSLPQVEATAIERSKAATVLA 185

Query: 138 KSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  +
Sbjct: 186 AENAKMLGLLNRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQFLHPEVVVY 245

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLF 245
           +   +LDGG DGL   R + D   RHL   G   +E+G N+   +V+      +E R L 
Sbjct: 246 ENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELG-NEHPPLVKTIMNLKYEGR-LK 303

Query: 246 LVNAFKDYGGNDR 258
            V ++ D    +R
Sbjct: 304 FVASYNDQYQRER 316


>gi|297172146|gb|ADI23127.1| methylase of polypeptide chain release factors [uncultured gamma
           proteobacterium HF0770_09E07]
          Length = 256

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 114/221 (51%), Gaps = 17/221 (7%)

Query: 37  FLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           F  + +++ +K++  I  I+G  +FY     ++ D   PRPETE+LVD  +  +   +E 
Sbjct: 39  FSLDGVIQEIKNKRPIQYIIGEWNFYEGTYFVNKDVLIPRPETEILVDH-IKNNFSNLE- 96

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LDLGTG+G + + + K       +G DI  KAL++AK N   +     F  ++S
Sbjct: 97  ----NVLDLGTGSGCIAIEISKLFESATILGSDICEKALKVAKKNNNQSNNKVNF--IKS 150

Query: 156 DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +WFS +EG FD+IVSNPPYI E   ++   L    F+P+++L     GL   + I     
Sbjct: 151 NWFSDIEGQFDLIVSNPPYIPEGTKLEASTL----FEPKVALFSEETGLKDLKKIISEAI 206

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFES---RKLFLVNAFKD 252
            +L  +G   +E G  Q  ++    +    + + ++N  KD
Sbjct: 207 NYLKINGALILEHGMGQSSELSSYMKKIGYKNIGILNDLKD 247


>gi|325911660|ref|ZP_08174067.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 143-D]
 gi|325476426|gb|EGC79585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 143-D]
          Length = 279

 Score = 89.7 bits (221), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +T  + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLN+DG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNQDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFAIEFKNDLAGKPRMV 274


>gi|313667968|ref|YP_004048252.1| adenine-specific methylase [Neisseria lactamica ST-640]
 gi|313005430|emb|CBN86865.1| hypothetical adenine-specific methylase [Neisseria lactamica
           020-06]
          Length = 303

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P      VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAHIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  + G +D+IVSNPPY+++  V+ L  E    +P ++L  G DGL   R I
Sbjct: 187 IRLIHTDLFEGLAGTYDLIVSNPPYVDAESVEALPEEYL-HEPELALGSGADGLDATRQI 245

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 246 LLNAAKFLNPKGVLLVEIGHNRDV 269


>gi|194766081|ref|XP_001965153.1| GF23689 [Drosophila ananassae]
 gi|190617763|gb|EDV33287.1| GF23689 [Drosophila ananassae]
          Length = 320

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 22/238 (9%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           S L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V   L 
Sbjct: 82  SQLADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFVR--LV 134

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               + EK   V +L++G G+GA+ LA+L   P      ++ S  A  +A  NA    + 
Sbjct: 135 IENYKNEKH--VNLLEVGCGSGAMSLAMLHSLPQVVSTAIERSKAATVLAAENAKLLNLQ 192

Query: 148 ERF----DTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +RF     T++ D +   E     +D+I+SNPPY+++     L  EV  ++   +LDGG 
Sbjct: 193 DRFTVHNHTMEEDKYMPEELKDKKYDLIISNPPYVKTEEFQYLHPEVVVYENLNALDGGS 252

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253
           DGL   R + +   RHL+  G   +E+G N+   +V+      +E R  F+ +    Y
Sbjct: 253 DGLRVARLVFELACRHLHPGGKLWLELG-NEHPPMVKTIMNLKYEGRLKFIASYNDQY 309


>gi|217970599|ref|YP_002355833.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thauera sp. MZ1T]
 gi|217507926|gb|ACK54937.1| modification methylase, HemK family [Thauera sp. MZ1T]
          Length = 317

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 11/212 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ +   +R  L  AI + +        ILG     + R T+      PR     L++  
Sbjct: 82  DACIPSEERIGLLEAIEQRVDERVPTAYILGEAWLGDFRFTVDPRVIVPRSFFAELLEDG 141

Query: 86  LAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAV 142
            A   P +E  + V  +LD+ TG+G  CLA+L    F       VD+S  AL++A+ N  
Sbjct: 142 FA---PWVEDPEAVGSVLDMCTGSG--CLAILMAHAFPNAHVSAVDLSEDALDVARINVA 196

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             G+ +R + +  D F  +EG  FD+I+SNPPY+ +  ++ L  E    +P+++L  G D
Sbjct: 197 DYGLEDRIELVHGDVFEGLEGRRFDLILSNPPYVTAEAMEALPPEYL-HEPQMALASGED 255

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           GL   R +    + HLN +G+ +VE+G+N+ +
Sbjct: 256 GLDVVRRLLAEAAEHLNPEGILAVEVGHNRAI 287


>gi|195471784|ref|XP_002088182.1| GE18440 [Drosophila yakuba]
 gi|194174283|gb|EDW87894.1| GE18440 [Drosophila yakuba]
          Length = 315

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 24/237 (10%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  S   F PRPETE  V   +   
Sbjct: 79  LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEEFVRLVID-- 131

Query: 90  LPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               E ++V  V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ 
Sbjct: 132 ----EYKNVKHVDLLEVGCGSGAMSLSMLHSLPQVQATAIERSKAATVLAAENAKMLGLL 187

Query: 148 ERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  ++   +LDGG 
Sbjct: 188 NRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGS 247

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDY 253
           DGL   R + D   RHL   G   +E+G +    V  I    +E R  F+ +    Y
Sbjct: 248 DGLRVARLVFDLACRHLRPGGKLWLELGNDHPPLVKTIMNLKYEGRLKFIASYNDQY 304


>gi|86131745|ref|ZP_01050342.1| methyltransferase, HemK family [Dokdonia donghaensis MED134]
 gi|85817567|gb|EAQ38741.1| methyltransferase, HemK family [Dokdonia donghaensis MED134]
          Length = 291

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 4/234 (1%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSL 90
           QR  L     R  K E +  I G   FY +   ++  T  PRPETE LV      +A  L
Sbjct: 54  QRKELEEITARLSKSEPMQYITGSSSFYGLDFQVNPATLIPRPETEELVAWIIDDVAQGL 113

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            + E +D++R+LD+GTG+G + + L K         VDIS  AL  A  NA  NGV   F
Sbjct: 114 LKEEAQDMLRLLDIGTGSGCIAITLAKNINKATVEAVDISQNALATAYQNAKANGVKVDF 173

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
                    +++ +++VIVSNPPY+       +   V   +P  +L     D L  YR I
Sbjct: 174 YNQNILETQALDEVYNVIVSNPPYVREQEKAMMRENVLSNEPDSALFVSDQDPLIFYRKI 233

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            +   + L   G    EI      + V + ++     V   KD  G DR++  C
Sbjct: 234 GELARKSLAPSGALYFEINEYLGRETVALLKNIGFTDVVLRKDMFGKDRMIKAC 287


>gi|311743961|ref|ZP_07717767.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM
           15272]
 gi|311313091|gb|EFQ83002.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM
           15272]
          Length = 285

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 3/193 (1%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  + G   F +V L +    F PRPETELL   A+     R  +  VV  +DL TG+G
Sbjct: 71  PLQHLTGSAAFRHVDLEVGPGVFVPRPETELLAGWAVQQLSARGPESPVV--VDLCTGSG 128

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ L+++ E P      V++   A   A  N    G+  R   + +D F  ++G  DV+V
Sbjct: 129 AIALSIVHEVPTAVVHAVELDEVAFGWAHQNLAGTGIDLRLGDM-ADAFGDLDGTVDVVV 187

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +NPPYI     + +  EVRD DP ++L  G DGL   R +     R L   G+   E   
Sbjct: 188 ANPPYIPLDAWESVAPEVRDHDPALALWSGDDGLDAMRVVEQTAWRLLRPGGVVGAEHAD 247

Query: 230 NQKVDVVRIFESR 242
            Q      +F  R
Sbjct: 248 AQGDTAPAVFAGR 260


>gi|332025875|gb|EGI66031.1| HemK methyltransferase family member 1 [Acromyrmex echinatior]
          Length = 353

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 33/239 (13%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILD 103
           L    +  I+G  DF ++ + L    F PRPETE+LVD    F L R+   + D   IL+
Sbjct: 114 LSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVD----FVLKRLNSSQADSCEILE 169

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFS 159
           +G G+GA+ LAL       K   +D +  A ++   N     +SE+      TL+SD  +
Sbjct: 170 IGCGSGAISLALAHACKKIKCTAIDENLHACDLTMINRSKLDLSEQVIVIHATLKSD--A 227

Query: 160 SVE----------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           S+E                 LFD ++SNPPY+ +  +  L  E+R ++   +LDGG DGL
Sbjct: 228 SIETLSNLYDAGDSKSLNSKLFDYVISNPPYVPTKKISELQPEIRIYEDLRALDGGDDGL 287

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
              + +    ++ L   G   +E+      + ++ F ++    KL   + +KD+  NDR
Sbjct: 288 KVIKPLLKYAAKGLKPGGRLFIEVDPTHP-EYIQFFTNKYPELKLHYKHTYKDFCNNDR 345


>gi|282917466|ref|ZP_06325219.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|283771285|ref|ZP_06344174.1| HemK protein [Staphylococcus aureus subsp. aureus H19]
 gi|282318668|gb|EFB49025.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|283459490|gb|EFC06583.1| HemK protein [Staphylococcus aureus subsp. aureus H19]
          Length = 278

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 115/233 (49%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY  +  ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRKFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ IA++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNIARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|58337081|ref|YP_193666.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM]
 gi|227903649|ref|ZP_04021454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254398|gb|AAV42635.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM]
 gi|227868536|gb|EEJ75957.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus ATCC 4796]
          Length = 280

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 17/257 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D  L D Q       I +  K  S   ILG+  F   ++ +   
Sbjct: 28  LAERLNLTPSEFELKQDMTLSDDQIKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV     ++L  ++  D V  LDLGTG+G + +ALLKE+   KG+     
Sbjct: 88  VLIPRFETEELV----TWALESLKNGDTV--LDLGTGSGCITVALLKEAEK-KGIKDISM 140

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D++  AL I++ N +   +     T +++    + G FD+I+SNPPYI++   + + 
Sbjct: 141 YASDVTDNALRISEENFLNYNLD--VTTRKANVLIGL-GKFDLIISNPPYIKTGEKNEMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL  YR  A  V  HLN  G   +E G++++  +  +F E   
Sbjct: 198 KNVLQNEPEEALFGGKDGLDFYRRFAKQVRAHLNSHGEFFLEFGFSEEDQLRELFAEELP 257

Query: 244 LFLVNAFKDYGGNDRVL 260
            F +   KD  G  R++
Sbjct: 258 DFDIEFRKDMAGKPRMV 274


>gi|325299194|ref|YP_004259111.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides salanitronis DSM 18170]
 gi|324318747|gb|ADY36638.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides salanitronis DSM 18170]
          Length = 280

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 118/263 (44%), Gaps = 13/263 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + S L  V   S+  +    D    +++   L + + R  + E    I G   F  +   
Sbjct: 25  AKSILTEVFRFSALDLYDGKDREFSEKEHAALEDILSRLKRFEPFQYITGEASFCGLPFH 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD    + +   + +  V I+D+GTG+G + +AL +  P  +   
Sbjct: 85  VAPGVLIPRPETAELVD----WIVSDFQGKAEVSIVDIGTGSGCIAVALARFLPGARVSA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
            DIS  AL IA+ NA  N V  R D  Q D FS +  E    + VSNPPYI       + 
Sbjct: 141 WDISDAALGIARRNAERNRV--RVDFRQVDVFSHIPAEAHAHIFVSNPPYIREREKADME 198

Query: 185 LEVRDFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             V D++P ++L   DG  D L +YR IA     HL   G+  VEI      + V +   
Sbjct: 199 RNVLDWEPELALFVPDG--DPLRYYRRIAGLGLVHLAPSGVLYVEINQAYGAETVELLAG 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KD  GNDR++   R
Sbjct: 257 IGYRDIVLRKDMSGNDRMIKAVR 279


>gi|229496958|ref|ZP_04390663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas endodontalis ATCC 35406]
 gi|229316060|gb|EEN81988.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas endodontalis ATCC 35406]
          Length = 294

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 120/261 (45%), Gaps = 15/261 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  +  LS  Q+++  +  LD+ Q      A+ R L HE I  ILG   F  + L ++ 
Sbjct: 32  LLEEILHLSRTQLLMASERPLDEGQEGQCWEAVRRLLHHEPIQYILGHAPFGPLDLFVAP 91

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE L  + +     R + +  VRILDLGTG+G + L L +  P  +   ++ 
Sbjct: 92  GVLIPRPETEELCSTIVE----RHKGQKGVRILDLGTGSGCIALYLAQRLPQSEVFALEK 147

Query: 130 SCKALEIAKSNAVTNGVSE------RFDTLQ-SDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           S +A  IA+ N   +G+        R D L+   W SS+  L D+IVSNPPYI+      
Sbjct: 148 SDQAATIARRNFDRSGLGSSTPQLLRGDMLEVGSWASSLPPL-DIIVSNPPYIQLSEAVT 206

Query: 183 LGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSR-HLNKDGLCSVEIGYNQKVDVVRIF- 239
           +   V + +P ++L     D L  YR I    +R  +       +E+      D + IF 
Sbjct: 207 MEPHVLEHEPHLALFAPEADPLLFYRAICQLAARLPMQSSAHIYLELNALLAEDTLAIFA 266

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+  +   +   D  G  R L
Sbjct: 267 EAPHILSASLLPDLSGKSRFL 287


>gi|156548304|ref|XP_001602562.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Nasonia vitripennis]
          Length = 334

 Score = 89.7 bits (221), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 123/271 (45%), Gaps = 32/271 (11%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           ++T L +H      + VLD  Q   L       L    +  I+G  DF  + LTL    F
Sbjct: 64  KITDLINHH-----ERVLDKEQLEKLELLCECRLSRMPVQYIIGEWDFRELTLTLEPPIF 118

Query: 73  EPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            PRPETE+LVD    F L RI         IL++G G+GA+ L++L  S     V +D++
Sbjct: 119 IPRPETEILVD----FLLTRISDSANKNKNILEIGCGSGAISLSVLHSSQNANIVAIDVN 174

Query: 131 CKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGL--------------FDVIVSNP 172
            +A E+   NA    +  R   L    Q D    V+                FD IVSNP
Sbjct: 175 PRACELTIRNAKNLDLDMRLTVLNAAIQKDGKIEVKKAYGTNKEEVDFSKRKFDFIVSNP 234

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI--GYN 230
           PYI +  V  L  E++ ++   +LDGG DGL     I    S  LN  G   +E+   + 
Sbjct: 235 PYIPTKSVFELQPEIKLYEDIRALDGGDDGLKWIEPILKYASEALNVGGYLILEVDSSHP 294

Query: 231 QKVD-VVRIFESRKLFLVNAFKDYGGNDRVL 260
           +++  +V  + + +L   +  KDY   +R++
Sbjct: 295 ERIKFLVEKYYANQLKFKHIHKDYCNKERIV 325


>gi|302526243|ref|ZP_07278585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
 gi|302435138|gb|EFL06954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
          Length = 263

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 17/176 (9%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +  E +  ILGW +F   R  ++   F PR  TELLV  A+ F+       D
Sbjct: 45  LAGMVERRVAGEPLEHILGWAEFAGRRFVVAPGVFVPRHRTELLVRLAVGFA------HD 98

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDL  G+GA+   +  E+P  +    D+   A+E A+ N          +  Q D 
Sbjct: 99  QSVVLDLCCGSGALGATVAAEAPGIELHAADVEPAAVECARQNVPG-------EVYQGDL 151

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           ++ +     G  DV+++N PY+ +  V  +  E RD +PR++LDGG DGL   R +
Sbjct: 152 YAPLPPRLRGRVDVLIANVPYVPTDDVALMPPEARDHEPRVALDGGADGLDVLRRV 207


>gi|325953818|ref|YP_004237478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Weeksella virosa DSM 16922]
 gi|323436436|gb|ADX66900.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Weeksella virosa DSM 16922]
          Length = 283

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 9/213 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +ILG+  F + +  ++  T  PRPETE LV+  +A  L +  + + +R+LD+GTG+G 
Sbjct: 68  IQQILGYAYFMDWKFLVNEFTLIPRPETEELVE-WIAKDLHK--RTNELRVLDIGTGSGC 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVI 168
           + +AL    P  +   +D S +A+ +AK NA  N V    D    D F     E  +DV+
Sbjct: 125 IPIALKHLLPNAQISAIDFSAQAIAMAKKNAKYNKV--EVDFFVHDIFDKFPTEKKYDVL 182

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEI 227
           VSNPPY+ +   + +   V +F+P  +L    D  L +Y+ I +     L  +G+  +EI
Sbjct: 183 VSNPPYVRNCEKEAMHQNVLNFEPETALFVADDNPLKYYQRIIEVAKEILTAEGVLYLEI 242

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                 ++  ++     + V   KD  G+ R+L
Sbjct: 243 NQYLSQEMTELYSGDYEY-VELRKDLSGHYRML 274


>gi|255009911|ref|ZP_05282037.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 3_1_12]
 gi|313147699|ref|ZP_07809892.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136466|gb|EFR53826.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 278

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G  +    +  D +L   ++  L + + R  K+E I  I G  +FY     ++   
Sbjct: 30  CDLLGQDAIDYYLGKDIILSANEQRDLESIVERLKKNEPIQYIQGRANFYGSMFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  +       E    VR+LD+GTG+G + ++L K  P  +    D+S 
Sbjct: 90  LIPRPETEELVDLIVK------ESATGVRLLDIGTGSGCIAISLSKHIPGAEVTAWDVSE 143

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            AL IA+ N         F+ +  D FS   S +  +D+IVSNPPY+     + +   V 
Sbjct: 144 DALAIARQNNQELKTKVNFEKV--DVFSTEFSGDRRYDIIVSNPPYVTESEKNEMEPNVL 201

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++P ++L   D   D L  YR IA      L+  G    EI      +++++   +   
Sbjct: 202 DWEPGLALFVPDN--DPLLFYRRIASLGREMLSLHGKLYFEINRAYGEEILQMLGGKGYR 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 DLRLIKDISGNDRIVTAKR 278


>gi|146296535|ref|YP_001180306.1| HemK family modification methylase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410111|gb|ABP67115.1| modification methylase, HemK family [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 289

 Score = 89.4 bits (220), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 96/185 (51%), Gaps = 12/185 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +  D   PR +TE L++ A+        +++ +  LD+GTG+G + +AL K  
Sbjct: 88  FMGLEFYVDEDVLIPRFDTETLIEVAIEL----FNRKENLNFLDVGTGSGCIAIALCK-- 141

Query: 120 PFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
            F   K + VDIS  AL +A+ NA  NGV ++   ++S+ F ++     FD I SNPPYI
Sbjct: 142 -FLDCKVIAVDISENALRVAEKNAKLNGVFDKIHFVKSNLFENIPPSLKFDAIFSNPPYI 200

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   V   +P+ +L    +GL +++ IA    ++L K G    E+GY Q   V
Sbjct: 201 SENEISMLDKRVLK-EPKQALFSKENGLYYFQEIAKNARQYLKKGGYIIFEVGYRQSQHV 259

Query: 236 VRIFE 240
            +I +
Sbjct: 260 KKILK 264


>gi|297192416|ref|ZP_06909814.1| methytransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151357|gb|EDY61859.2| methytransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 272

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 92/212 (43%), Gaps = 6/212 (2%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           R    L   + R +    +  +LGW +F  VR+ +    F PR  +E LV  A+A + PR
Sbjct: 35  RDPHELAAMVERRIAGLPLEHVLGWAEFCGVRVAVDPGVFVPRRRSEFLVGRAIALAPPR 94

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                   ++DL  G+GA+  A+L+     +    DI   A+  A  N    G       
Sbjct: 95  PV------VVDLCCGSGALGAAVLRAVGAGELHAADIESAAVRCALRNVGPVGGRVHQGD 148

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           L     + + G  DV+++N PY+ +  +  L  E RDF+P ++LDGG DGL   R +   
Sbjct: 149 LYDPLPAGLAGRVDVLIANAPYVPTGEIGLLPPEARDFEPLVALDGGPDGLGIQRRVTAR 208

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             R L   G   +E    Q    V  F    L
Sbjct: 209 AGRWLAPGGSLLIETSERQAPSTVAAFTRHGL 240


>gi|227892679|ref|ZP_04010484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus ultunensis DSM 16047]
 gi|227865550|gb|EEJ72971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus ultunensis DSM 16047]
          Length = 280

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 19/258 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D VL D Q       I +  K  S   ILG+  F   ++ +   
Sbjct: 28  LAERLNLTPSEFEMKQDMVLSDEQVKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV--- 127
              PR ETE LV+ AL  SL     +   ++LDLGTG+G + +AL KE+   KG+     
Sbjct: 88  VLIPRFETEELVEWALQ-SL-----KSGNKVLDLGTGSGCITVALAKEAEK-KGIKALTL 140

Query: 128 ---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D++  AL  ++ N +   +     T +++    +E  FD+I+SNPPYI++   + + 
Sbjct: 141 YASDVTDTALRTSEENFLNYHLD--VTTRKANVLIGLEK-FDLIISNPPYIKTTEKNVMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F +++L
Sbjct: 198 KNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEEQLKELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +   KD  G  R++
Sbjct: 257 PDFDIEFRKDMAGKPRMI 274


>gi|191638151|ref|YP_001987317.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23]
 gi|301066210|ref|YP_003788233.1| methylase of polypeptide chain release factor [Lactobacillus casei
           str. Zhang]
 gi|190712453|emb|CAQ66459.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23]
 gi|300438617|gb|ADK18383.1| Methylase of polypeptide chain release factor [Lactobacillus casei
           str. Zhang]
 gi|327382181|gb|AEA53657.1| HemK protein [Lactobacillus casei LC2W]
 gi|327385378|gb|AEA56852.1| HemK protein [Lactobacillus casei BD-II]
          Length = 276

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E    I+G   F+     ++     PR ETE LV           E+R     
Sbjct: 61  VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ L L ++ P       D+S +AL +AK NA    V+ +F    SD F+++
Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 172

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              +D +V+N PYI       +      ++P+++L  G  GL+ +      + +HL   G
Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232

Query: 222 LCSVEIGYNQKVDVVRIFESR 242
              +E GY Q+  +  +F  +
Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253


>gi|187734558|ref|YP_001876670.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187424610|gb|ACD03889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 301

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 122/279 (43%), Gaps = 42/279 (15%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +H   C  T L S       D  +++ +   L   + R    E +  +LG  +F+     
Sbjct: 32  AHVLHCNRTALYSQF-----DRPVEEAELAPLRELLKRRAAGEPLQHLLGVTEFFRRDFL 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-- 124
             +    PRPETE LV+  L   +P       VRILD+GTG+G + + L  E     G  
Sbjct: 87  TDARALIPRPETEELVEMVLK-KIPD----HPVRILDMGTGSGVIGVTLALELKERAGEV 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----------------EG----- 163
           V  DIS +AL++A  NA+  G   R  T+Q++ F+++                EG     
Sbjct: 142 VLADISPQALDLALENAMRLGA--RVSTIQTNLFANISQEKTDPHAEDADSAPEGKKGEN 199

Query: 164 ----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
               LFDVIV+N PYI     + L  EV   DP  +L GG  G             +LN+
Sbjct: 200 GRNMLFDVIVANLPYIAEG--EKLAPEVMK-DPHTALFGGPKGWEIIERFLARARDYLNE 256

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           DG  ++EIGY+Q   V +I +      +   KD  G  R
Sbjct: 257 DGFVALEIGYDQASVVTQIMDGYGYNYIEVLKDMSGVSR 295


>gi|114330608|ref|YP_746830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosomonas eutropha C91]
 gi|114307622|gb|ABI58865.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosomonas eutropha C91]
          Length = 306

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 6/142 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF 150
           I+  D+   LDL TG+G  CLA+L    F +     VDIS  AL++A  N     +  R 
Sbjct: 136 IDPHDINSALDLCTGSG--CLAILLAHAFEQAQIDAVDISSDALDVASINIRNYDLMNRI 193

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + + +D F+ ++G  +D+I+SNPPY+ +V +  L  E R  +P I+L GG+DGL     I
Sbjct: 194 NLIHADLFTRLQGKRYDLIISNPPYVNAVSMAMLPEEYR-HEPAIALAGGLDGLDIVHRI 252

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231
               + HL ++GL  +EIG+NQ
Sbjct: 253 LREAADHLTENGLLIMEIGHNQ 274


>gi|309812205|ref|ZP_07705963.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dermacoccus sp. Ellin185]
 gi|308433892|gb|EFP57766.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dermacoccus sp. Ellin185]
          Length = 483

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 14/219 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G   F ++ L +    F PRPETE+LVD+AL  +          RI+DL TG+GA
Sbjct: 73  LQHLTGRAPFRSLELRVGPGVFVPRPETEMLVDAALEAAP------HGGRIVDLCTGSGA 126

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDV 167
           + LA+  E P  +   V++S +A   A  N    G++      D  Q+     +EG FDV
Sbjct: 127 IALAIKAERPDLEVYAVELSEEAAAWAALNCKQIGLTVNLSVEDARQA--LPELEGSFDV 184

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVE 226
           +VSNPPY+ + +V  +  EV + DP I+L GG  DGL     IA+  +  L   GL  +E
Sbjct: 185 VVSNPPYVPTGMV-PIDPEVAEHDPEIALYGGSEDGLRFPLEIAERAAHLLKPGGLLVME 243

Query: 227 IGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
               Q   +      R+ F       D  G  R+ L  R
Sbjct: 244 HADAQGESLPEALLDRRGFEWARDEADLAGKPRMTLARR 282


>gi|325913020|ref|ZP_08175393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 60-B]
 gi|325477700|gb|EGC80839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 60-B]
          Length = 279

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLSKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|227535365|ref|ZP_03965414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227186961|gb|EEI67028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 276

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E    I+G   F+     ++     PR ETE LV           E+R     
Sbjct: 61  VERLRQFEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ L L ++ P       D+S +AL +AK NA    V+ +F    SD F+++
Sbjct: 115 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFTAL 172

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              +D +V+N PYI       +      ++P+++L  G  GL+ +      + +HL   G
Sbjct: 173 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 232

Query: 222 LCSVEIGYNQKVDVVRIFESR 242
              +E GY Q+  +  +F  +
Sbjct: 233 AAYLEFGYRQEPALRELFAKQ 253


>gi|23100452|ref|NP_693919.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
 gi|22778685|dbj|BAC14953.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
          Length = 287

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 16/210 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     ++     PRPETE LV   +      +E+   + I+D+GTG+G + + L  E 
Sbjct: 80  FYGRVFEVNQHVLIPRPETEELVQQVIQ-QAKTMEQP--ITIVDVGTGSGVIAITLALEL 136

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +    DIS KAL +AK NA        F  L+ ++   F  +    D+IVSNPPYI 
Sbjct: 137 PGSRVFATDISEKALAVAKRNAQAMKADVTF--LEGNFLEPFLDINQTADIIVSNPPYIP 194

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV-SRHLNKDGLCSVEIGYNQKVDV 235
               + L   V++FDP ++L    +GL+ Y  I   + +  L+   + + EIG++Q   +
Sbjct: 195 WSQSEELQDTVKNFDPELALFAENNGLAAYHAILRQMKTMKLSDQSILAFEIGFDQSEAI 254

Query: 236 VRI----FESRKLFLVNAFKDYGGNDRVLL 261
             +      SR++F V   KD    DR+LL
Sbjct: 255 TNMIRQNLPSREVFTV---KDINDKDRILL 281


>gi|270668928|ref|ZP_06222563.1| HemK family protein [Haemophilus influenzae HK1212]
 gi|270316634|gb|EFA28442.1| HemK family protein [Haemophilus influenzae HK1212]
          Length = 156

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 11/140 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           RILDLGTGTGA+ LAL  E  F         + +GVD+    + +A+SNA  N ++ +F 
Sbjct: 14  RILDLGTGTGAIALALASELSFICQKRLISLEIIGVDLMPDVVALAQSNAERNQLNVQF- 72

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            LQS WF ++ G FD+IVSNPPYI++        +VR F+P  +L     G +  R I +
Sbjct: 73  -LQSRWFDNITGKFDLIVSNPPYIDAQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIE 130

Query: 212 GVSRHLNKDGLCSVEIGYNQ 231
             S +LN +G+  +E G+ Q
Sbjct: 131 LASSYLNSNGVLLLEHGWQQ 150


>gi|312874596|ref|ZP_07734620.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2053A-b]
 gi|311089826|gb|EFQ48246.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2053A-b]
          Length = 279

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|297161741|gb|ADI11453.1| HemK family modification methylase [Streptomyces bingchenggensis
           BCW-1]
          Length = 268

 Score = 89.0 bits (219), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 20/228 (8%)

Query: 31  DDRQRFFLTNA---------IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +D  R  +T A         + R +    +  +LGW +F+ +R+ +    F PR  TE L
Sbjct: 26  EDEARLLVTTARTPDELATMVDRRVAGLPLEHVLGWAEFHGLRIAVDHGVFVPRRRTEYL 85

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPFFKGVGVDISCKALEIA 137
           VD A+  + P         ++DL  G+GAV  AL+     +SP  +    DI   A+  A
Sbjct: 86  VDQAVGLARPG------AVVVDLCCGSGAVGAALITALGADSPI-ELYAADIEPAAVRCA 138

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N   +        L     +++ G  DV+V+N PY+ +  +  L  E RD +PR++LD
Sbjct: 139 RRNIPADKGRVYEGDLYEPLPAALRGRVDVLVANAPYVPTDAIRLLPPEARDHEPRVALD 198

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           GG DGL   R +    ++ L  DG   +E    Q       F    L 
Sbjct: 199 GGADGLDVQRRVLAEAAQWLAPDGHLLIETSEGQAPRTADTFARHGLI 246


>gi|307327907|ref|ZP_07607089.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces violaceusniger Tu 4113]
 gi|306886425|gb|EFN17429.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces violaceusniger Tu 4113]
          Length = 281

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 13/221 (5%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD+  D R       A+ R    E +  I G   F  + L +    F PRPETE    S 
Sbjct: 46  PDADFDAR----YWEAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SV 97

Query: 86  LAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +++  +   DVV   I+DL  G+GA+ LAL +E P  +   V++   AL  A+ N   
Sbjct: 98  VGWAIDAVRAMDVVEPLIVDLCAGSGAIALALAQEVPRSRVHAVELDEGALRWARKNVQG 157

Query: 144 NGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           + V     D L +     ++G  D+++SNPPYI     + +  E RD DP+++L  G DG
Sbjct: 158 SRVVLHHADALTA--LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDG 215

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   R +     R L   G+  +E    Q   V  IF   +
Sbjct: 216 LDVIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEER 256


>gi|239631747|ref|ZP_04674778.1| methylase of polypeptide chain release factor [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526212|gb|EEQ65213.1| methylase of polypeptide chain release factor [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 286

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 8/201 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E    I+G   F+     ++     PR ETE LV           E+R     
Sbjct: 71  VERLRQSEPAQYIVGVAPFFGELFKVTPAVLIPRFETEELVAWVAE------EQRTAQTG 124

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+GA+ L L ++ P       D+S +AL +AK NA    V+ +F    SD F+++
Sbjct: 125 LDLGTGSGAIGLTLARKLPQTTMTLSDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAAL 182

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              +D +V+N PYI       +      ++P+++L  G  GL+ +      + +HL   G
Sbjct: 183 PARYDFVVTNLPYIAPEETPVMDQSTLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGG 242

Query: 222 LCSVEIGYNQKVDVVRIFESR 242
              +E GY Q+  +  +F  +
Sbjct: 243 AAYLEFGYRQEPALRELFAKQ 263


>gi|312873846|ref|ZP_07733889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2052A-d]
 gi|311090628|gb|EFQ49029.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2052A-d]
          Length = 279

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|312871966|ref|ZP_07732048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311092543|gb|EFQ50905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2062A-h1]
          Length = 279

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFAIEFKNDLAGKPRMV 274


>gi|145342148|ref|XP_001416155.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901]
 gi|144576380|gb|ABO94448.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901]
          Length = 398

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 108/219 (49%), Gaps = 24/219 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----------LDLGT 106
           WRD   +  T+++    PRPETELL+D A  + L  +E                 LDLGT
Sbjct: 164 WRD---MEFTVNTSVLIPRPETELLIDFACEW-LRELESNTENHTMNYNLLSGPWLDLGT 219

Query: 107 GTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           G+G + +AL KE     +       VD+S  ALE+A+ NA  NGV +   TL   WF+ +
Sbjct: 220 GSGILAIALAKELQRKCADASSVYAVDVSVAALELARDNARRNGVQDSIKTLHGSWFNPI 279

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLN 218
           +    F  I++NPPYI + +++ L  EV   +P ++LDGG    S H  TI   V   L 
Sbjct: 280 KKDVRFTGILTNPPYIPTDLLESLQPEVCSHEPWLALDGGGGDGSAHLVTICRDVKNFLL 339

Query: 219 KDGLCSVEI-GYNQKVDVVRIFESRKLFL-VNAFKDYGG 255
             GL +VE  G  Q   V  +  S + F  V+   DY G
Sbjct: 340 PGGLFAVETHGLEQARLVQHLLNSTEAFRDVHLKADYSG 378


>gi|325184917|emb|CCA19409.1| methylase subunit of polypeptide release factor puta [Albugo
           laibachii Nc14]
          Length = 334

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 42/280 (15%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           SS+ + +  D  + D +     + I R  K E I  I G ++F+++   + S+T  PR +
Sbjct: 60  SSNSLFLQLDREVSDGENTNFLSFIRRRCKGEPIAYITGTKEFWSMEFRVDSNTLIPRAD 119

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +E+LV+ A+    P+  +   + ILD+GTG+G + L+ L E P   G+G+D+  KAL+IA
Sbjct: 120 SEVLVE-AITNEYPKDAR---LGILDIGTGSGCLLLSALSEYPRAWGLGIDVCSKALDIA 175

Query: 138 KSNAVTNGVSERFDTLQSDWFS----SVEGL--------FDVIVSNPPYI---ESVIVDC 182
           + NA  + + +R D ++ D       S EGL        FDVI+ NPPYI   E  +VD 
Sbjct: 176 RENARHHSLEDRCDFMECDLRDISSFSREGLDESFPSAPFDVILFNPPYIPQSERFMVD- 234

Query: 183 LGLEVRDFDPRISL-----DGGID-GLSHYRTIADGVSRHLN-----------KDGLCSV 225
              EV  ++P ++L     D   D GL+ Y  +   V R L            +  +  +
Sbjct: 235 --EEVLIYEPHLALFPSSNDVNNDFGLNLYECLQRVVLRLLGNVHSAERSTTFRKQIACM 292

Query: 226 EIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVLLF 262
           EIG  ++ + V+   +    KL       D     R LLF
Sbjct: 293 EIGSQKQAEAVKALFAHLEPKLQFKKTLFDIENRHRGLLF 332


>gi|329921114|ref|ZP_08277637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 1401G]
 gi|328935021|gb|EGG31510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 1401G]
          Length = 279

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|302518708|ref|ZP_07271050.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|302427603|gb|EFK99418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
          Length = 302

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  ++G   F+ +R+ +    F PR  +E LV    A +L  +     V +
Sbjct: 50  VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLV----ARALDGVRAEGAVTL 105

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL  G+GA+ LAL     P       D+   AL  A+ N    G       L +   ++
Sbjct: 106 LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 165

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+ +N PY+ S  V  L  E R  +P ++LDGG DGL   R +A+  +  L   
Sbjct: 166 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPG 225

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           G   VE G  Q  +V  IF +  L    A ++ G
Sbjct: 226 GRLLVESGERQAPEVAGIFTAAGLHAEIAHEEEG 259


>gi|170781878|ref|YP_001710210.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156446|emb|CAQ01594.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 291

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 12/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   +  V GLS  QV       + +D R    +     R  + E +  I G   F ++
Sbjct: 33  DAELLVGHVLGLSRGQVQSRAITRAAVDARDAERVLELTARRARREPLQHITGVAHFRSL 92

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETE +  + LA         D    +DLGTG+GA+ LAL  E P  +
Sbjct: 93  ELLVGPGVFVPRPETEHV--AQLAIDALSAAPGDAPVAVDLGTGSGALALALATEVPHAR 150

Query: 124 GVGVDISCKALEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +++S +A      N   +   V  R   L +D F  ++G   V+VSNPPYI    VD
Sbjct: 151 VHAIEVSPEAHAWTARNVERLAPRVDLRLGDL-ADAFPELDGTVSVVVSNPPYIP---VD 206

Query: 182 CLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            +    EVR  DP ++L GG DGL   R ++    R L+  G   +E G  Q   +  + 
Sbjct: 207 AVPRDPEVRLHDPALALYGGADGLDVVRLVSTTARRLLHPGGALVIEHGELQGQAIRALL 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++         +D    DR     R
Sbjct: 267 DADGWRATATHQDLTRRDRATTALR 291


>gi|308380039|ref|ZP_07488465.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011]
 gi|308399357|ref|ZP_07492977.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012]
 gi|18275934|sp|Q10602|HEMK_MYCTU RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MtuHHemKP
 gi|308362831|gb|EFP51682.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011]
 gi|308366497|gb|EFP55348.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012]
          Length = 304

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 67  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQ 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|238855956|ref|ZP_04646242.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 269-3]
 gi|260664673|ref|ZP_05865525.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Lactobacillus jensenii SJ-7A-US]
 gi|282934363|ref|ZP_06339630.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|313471877|ref|ZP_07812369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 1153]
 gi|238831429|gb|EEQ23780.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 269-3]
 gi|239529208|gb|EEQ68209.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 1153]
 gi|260561738|gb|EEX27710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Lactobacillus jensenii SJ-7A-US]
 gi|281301573|gb|EFA93850.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
          Length = 280

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 14/198 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  F   ++ +      PR ETE LV+ AL          D ++ILDLGTG+G
Sbjct: 67  SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVEWALKHL------HDGMKILDLGTGSG 120

Query: 110 AVCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+ +AL KE+             DIS  AL I + N +   +       +++    +E  
Sbjct: 121 AIMVALAKEAAKKDIKDLTLYASDISDSALRICEENFLKFALD--VTVRKANVLIGLEK- 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+I+SNPPYI+    + +   V   +P  +L GG DGL  YR  A  + +HL   G   
Sbjct: 178 FDLIISNPPYIKPEEKNLMDSNVLQNEPEEALFGGEDGLEFYRRFAKQIRKHLTSQGEFF 237

Query: 225 VEIGYNQKVDVVRIFESR 242
           +E G+++K ++ ++F + 
Sbjct: 238 LEFGFSEKDELAKLFATE 255


>gi|225024197|ref|ZP_03713389.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC
           23834]
 gi|224943222|gb|EEG24431.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC
           23834]
          Length = 166

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 1/133 (0%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G + +      P  +    D+S +ALE+A  N    G+ ER   +QSD F++
Sbjct: 1   MLDLCTGSGCLAIQAACHYPEAQVDAADLSPEALEVAAINVANYGLEERVRLIQSDLFAN 60

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G +D+I+SNPPY+ +  V  L  E    +P ++L  G DGL   R I     R LN  
Sbjct: 61  LSGTYDLIISNPPYVNAESVAALPAEYL-HEPEMALGSGEDGLDATRQILQHAPRFLNPR 119

Query: 221 GLCSVEIGYNQKV 233
           G+  VEIG+N++ 
Sbjct: 120 GVLLVEIGHNREA 132


>gi|302191108|ref|ZP_07267362.1| protoporphyrinogen oxidase [Lactobacillus iners AB-1]
          Length = 279

 Score = 89.0 bits (219), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|295135419|ref|YP_003586095.1| modification methylase HemK [Zunongwangia profunda SM-A87]
 gi|294983434|gb|ADF53899.1| modification methylase HemK [Zunongwangia profunda SM-A87]
          Length = 283

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 12/249 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           L+  Q+ ++P+  L+D +      A+ +    E I  I+G  +F+++   ++     PRP
Sbjct: 37  LNRLQIALEPNKKLNDTEVSEFEGALEKLRVFEPIQYIIGETEFFSLSFKVTPGVLIPRP 96

Query: 77  ETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           ETE LV   L   SL   +++  + ILD+GTG+G + ++L K  P  +   +DIS +AL+
Sbjct: 97  ETEELVQWILDEVSL---KQQQDLHILDIGTGSGCIPISLKKHLPKAQISAIDISEEALK 153

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A  N   N VS      D L +   S     FDVIVSNPPY+  +    +   V  ++P
Sbjct: 154 VANLNTEKNKVSVHLVHQDILSTQKLSRQ---FDVIVSNPPYVRELEKAEMQQNVLQYEP 210

Query: 193 RISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +L     + L  Y  I       L+K+GL   EI      +   + E    F     K
Sbjct: 211 ETALYVKDENPLLFYNKITKLAQEGLSKNGLLFFEINQYLGEETKTMVEEHD-FRAELRK 269

Query: 252 DYGGNDRVL 260
           D  GN R+L
Sbjct: 270 DMFGNFRML 278


>gi|291242281|ref|XP_002741036.1| PREDICTED: HemK methyltransferase family member 1-like
           [Saccoglossus kowalevskii]
          Length = 228

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 10/174 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  DF ++ L L    F PRPETE LV+  L +  PRI     +  L++G G+GA+ L
Sbjct: 6   VLGEWDFRDLTLKLRPPVFIPRPETEELVEMILQYHRPRIN----LHFLEVGCGSGAISL 61

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDV 167
           +LL E P   G+ +D S  A+++ + NA    + +R      +   S      + G +D 
Sbjct: 62  SLLHEIPQAIGIAIDQSHAAVKLTEHNATRLNLHDRLTVHNIEVVDSFKIPNDIAGPYDA 121

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           I+SNPPYI    +  L  E+  ++   +L GG DGL   + I       L  +G
Sbjct: 122 IISNPPYIFHDDMKDLAPEISRYEDTKALHGGHDGLEVTKNILKMARYLLKHEG 175


>gi|315653747|ref|ZP_07906667.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC
           55195]
 gi|315489109|gb|EFU78751.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC
           55195]
          Length = 281

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 29  LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 88

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 89  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 141

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 142 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 200 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 258

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 259 PEFTIEFKNDLAGKPRMV 276


>gi|253731045|ref|ZP_04865210.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725233|gb|EES93962.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 278

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I D +   +
Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIDDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|259501684|ref|ZP_05744586.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM
           13335]
 gi|259166969|gb|EEW51464.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM
           13335]
          Length = 281

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 29  LAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 88

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 89  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 141

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 142 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +F +++L
Sbjct: 200 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAELF-AKEL 258

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 259 PEFTIEFKNDLAGKPRMV 276


>gi|90021737|ref|YP_527564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Saccharophagus degradans 2-40]
 gi|89951337|gb|ABD81352.1| modification methylase, HemK family [Saccharophagus degradans 2-40]
          Length = 300

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 11/188 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  +H  +  + G   F  ++  ++ D   PR     L++       P +++    +ILD
Sbjct: 79  RVQQHIPLPYLTGEAWFAGLKFHVTPDVLIPRSPIAELIEREFQ---PMLQQYPA-KILD 134

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           L TG+G + +A       F+   VDIS     AL++A+ N   + + +R  T++SD F  
Sbjct: 135 LCTGSGCIGIACAYA---FEEAMVDISDISTAALDVAQLNIANHTLQDRVSTVESDVFDG 191

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G +D+IVSNPPY+++  +  +  E +  +PR++L+ G DGL   R I    ++HL +D
Sbjct: 192 ITGQYDLIVSNPPYVDAQDMASIPAEYQ-VEPRMALESGDDGLDITRRILAKAAQHLTED 250

Query: 221 GLCSVEIG 228
           GL  VE+G
Sbjct: 251 GLLVVEVG 258


>gi|154148971|ref|YP_001406204.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
 gi|153804980|gb|ABS51987.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
          Length = 262

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 123/243 (50%), Gaps = 17/243 (6%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            S   +I++ D  LD+  +F+    I +    + +  I    +F+     +      PR 
Sbjct: 30  FSDTDLILNLDKELDENSKFW--EFIEKFQNGKPLAYITNEVEFFGEIFFVDESVLIPRF 87

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV+     SL  ++     +IL++GTG+G + + L K     + + VDIS KAL+ 
Sbjct: 88  ETEILVNK----SLEILKNFKAPKILEIGTGSGIISIMLKKNIKDAEILAVDISKKALKT 143

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195
           A  NA  +GV   F    SD F +VEG FD++VSNPPYI +   +D   L+    +P  +
Sbjct: 144 AIKNAKFHGVEIDFKI--SDLFENVEGNFDLVVSNPPYIAQDYPLDDYVLK----EPETA 197

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG +G      + + +++  N+    + EIGY+QK ++++    +  F    +KD  G
Sbjct: 198 LIGGKNG---SEILINLINQSANRTKFLACEIGYDQK-EILKKELVKNGFKAQFYKDLAG 253

Query: 256 NDR 258
            DR
Sbjct: 254 FDR 256


>gi|116629882|ref|YP_815054.1| methylase of polypeptide chain release factor [Lactobacillus
           gasseri ATCC 33323]
 gi|282851602|ref|ZP_06260967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 224-1]
 gi|311110482|ref|ZP_07711879.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri MV-22]
 gi|116095464|gb|ABJ60616.1| Methylase of polypeptide chain release factor [Lactobacillus
           gasseri ATCC 33323]
 gi|282557570|gb|EFB63167.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 224-1]
 gi|311065636|gb|EFQ45976.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri MV-22]
          Length = 280

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV  AL  ++   EK     ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKWALE-NIKSGEK-----ILDLGTGSG 120

Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+ +AL+K++   K   +     DI+  AL  ++ N +   +  R  T +++    +E  
Sbjct: 121 AIMVALVKQAQDRKIENLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLEK- 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD I+SNPPYI++   D +   V   +P  +L GG DGL  YR  A  +  HL   G   
Sbjct: 178 FDTIISNPPYIKTSEKDLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237

Query: 225 VEIGYNQKVDVVRIFES 241
           +E G+++K  +  +FE+
Sbjct: 238 LEFGFSEKDQLKDLFEA 254


>gi|265765180|ref|ZP_06093455.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_16]
 gi|263254564|gb|EEZ25998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_16]
          Length = 278

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     ++   
Sbjct: 30  CDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       D+S 
Sbjct: 90  LIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAWDVSE 143

Query: 132 KALEIAKSN--AVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA  N   +  GV  E+ D L ++     +  +D+IVSNPPY+     + +   V 
Sbjct: 144 EALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQ--YDMIVSNPPYVTESEKNEMEPNVL 201

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++P ++L   D   D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 202 DWEPGLALFVPDN--DPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVIQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|30248453|ref|NP_840523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosomonas europaea ATCC 19718]
 gi|30138339|emb|CAD84347.1| adenine specific methylase, HemK family [Nitrosomonas europaea ATCC
           19718]
          Length = 312

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 7/150 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF 150
           ++  D+   LDL TG+G  CLA+L    F +     VDIS  AL++A  N     +  R 
Sbjct: 140 MDPYDIGTALDLCTGSG--CLAILLAHAFEQAQIDAVDISSDALDVASINVRNYDLINRV 197

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             +QSD F+ ++G  +D+I+SNPPY+ +  +  L  E    +P ++L GG DGL   R I
Sbjct: 198 GLIQSDLFAELQGKRYDLIISNPPYVNAASMAMLPEEYH-HEPSVALAGGSDGLDIIRRI 256

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               + HL +DGL  +EIG+NQ  +V R F
Sbjct: 257 FKEAAHHLTEDGLLIMEIGHNQ-AEVERAF 285


>gi|195385016|ref|XP_002051204.1| GJ14693 [Drosophila virilis]
 gi|194147661|gb|EDW63359.1| GJ14693 [Drosophila virilis]
          Length = 335

 Score = 88.6 bits (218), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 22/236 (9%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L + +RF         L+H     I+G  DF ++ L  +   F PRPETE  V       
Sbjct: 99  LANFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 149

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +    +   V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ +R
Sbjct: 150 IENYRQAKHVNMLEVGCGSGAMSLSVLHALPQVEATAIERSKVATVLAWENANLLGLQDR 209

Query: 150 FD----TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           F     T++ D +   E     +D+I+SNPPY+++     L  EV  ++   +LDGG DG
Sbjct: 210 FKVHNHTMEEDNYMPTELQDKQYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDG 269

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNAFKDY 253
           L   R + D   RHL   G   +E+G N+   +V+      ++ R  F+ + F  Y
Sbjct: 270 LRVARLVFDLACRHLRPGGKLWLELG-NEHPPLVKTIMNLKYQGRLNFVGSYFDQY 324


>gi|238853675|ref|ZP_04644043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 202-4]
 gi|238833713|gb|EEQ25982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 202-4]
          Length = 280

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 14/197 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV  AL  ++   EK     ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKLALE-NIKSGEK-----ILDLGTGSG 120

Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+ +AL+K++   K   +     DI+  AL  ++ N +   +  R  T +++    +E  
Sbjct: 121 AIMVALVKQAQDRKIENLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLEK- 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD I+SNPPYI++   D +   V   +P  +L GG DGL  YR  A  +  HL   G   
Sbjct: 178 FDTIISNPPYIKTSEKDLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237

Query: 225 VEIGYNQKVDVVRIFES 241
           +E G+++K  +  +FE+
Sbjct: 238 LEFGFSEKDQLKDLFEA 254


>gi|146307761|ref|YP_001188226.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina ymp]
 gi|145575962|gb|ABP85494.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudomonas mendocina ymp]
          Length = 306

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 8/215 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +   L   + R ++       +LG   F  +   +      PR     L++  
Sbjct: 60  DCRLEDDEHLHLQGLLKRRIEERVPTAYLLGEAWFCGLPFRVDERVLVPRSPIAELIERH 119

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  LP+    +  R+LDL TG+G + +A   E P  + V  D+S +ALE+A  N   +G
Sbjct: 120 FAPWLPQ----EPARVLDLCTGSGCIGIACAYEFPEAEVVLADLSFEALEVANQNIERHG 175

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER   +Q D F+ + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL 
Sbjct: 176 LEERVYCVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEYQH-EPAMGLACGADGLD 234

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +    + HL + GL  VE+G N +V V  ++
Sbjct: 235 LVRRMLAEAADHLTERGLLIVEVG-NSQVHVEALY 268


>gi|168021379|ref|XP_001763219.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685702|gb|EDQ72096.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 8/187 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L++      PRPETE ++D A A ++      +     DLGTG+GA+ +A+ 
Sbjct: 110 WRDLV---LSVQEGVLIPRPETEQMIDLAEA-AITADNSLNNGLWADLGTGSGALAIAMA 165

Query: 117 KESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172
           +  P    V  VD S  A+ +A+ N     + +R + +   WF+ +E L      I+SNP
Sbjct: 166 RLLPPTGSVIAVDASPIAVAVARRNVEKYELKDRVNVVFGSWFTPLENLNGSLAGILSNP 225

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  EV   +P+ +LDGG DG+S  R I  G S  L   G   +E     +
Sbjct: 226 PYIPSENIAGLQAEVGKHEPQSALDGGEDGMSDLRKICQGSSFALRAGGFLVLETNGGNQ 285

Query: 233 VDVVRIF 239
            + V  +
Sbjct: 286 AEAVSAY 292


>gi|302521936|ref|ZP_07274278.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|318060717|ref|ZP_07979440.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces sp. SA3_actG]
 gi|318075508|ref|ZP_07982840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces sp. SA3_actF]
 gi|333024404|ref|ZP_08452468.1| putative methyltransferase [Streptomyces sp. Tu6071]
 gi|302430831|gb|EFL02647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|332744256|gb|EGJ74697.1| putative methyltransferase [Streptomyces sp. Tu6071]
          Length = 281

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 17/223 (7%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD+  D   R++ T  I R    E +  I G   F  + L +    F PRPETE    S 
Sbjct: 46  PDADFD--ARYWET--IARREAREPLQHITGRAYFRYLELQVGPGVFVPRPETE----SV 97

Query: 86  LAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +++  +   DVV   ++DL TG+GA+ LAL +E P      V++S  AL   + N   
Sbjct: 98  VGWAIDAVRAMDVVEPLVVDLCTGSGAIALALAQEVPRSTVHAVELSEDALVWTRKNVEG 157

Query: 144 NGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +    R      D F+++   +G  D+++SNPPYI     + +  E RD DP ++L  G 
Sbjct: 158 S----RVHLHHGDAFAALPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPEMALFSGE 213

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           DGL   R I     R L   G+  VE    Q   V  +F   +
Sbjct: 214 DGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLFTEER 256


>gi|15608440|ref|NP_215816.1| hypothetical protein Rv1300 [Mycobacterium tuberculosis H37Rv]
 gi|148661088|ref|YP_001282611.1| hypothetical protein MRA_1308 [Mycobacterium tuberculosis H37Ra]
 gi|167969627|ref|ZP_02551904.1| HemK [Mycobacterium tuberculosis H37Ra]
 gi|306775472|ref|ZP_07413809.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001]
 gi|306971581|ref|ZP_07484242.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010]
 gi|1322424|emb|CAA97733.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium tuberculosis
           H37Rv]
 gi|148505240|gb|ABQ73049.1| HemK [Mycobacterium tuberculosis H37Ra]
 gi|308216020|gb|EFO75419.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001]
 gi|308358949|gb|EFP47800.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010]
          Length = 325

 Score = 88.6 bits (218), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 88  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQ 202

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|289550268|ref|YP_003471172.1| polypeptide chain release factors methylase [Staphylococcus
           lugdunensis HKU09-01]
 gi|289179800|gb|ADC87045.1| polypeptide chain release factors methylase [Staphylococcus
           lugdunensis HKU09-01]
          Length = 279

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY     ++ +   PRPETE ++   L              
Sbjct: 59  AVQRMLLGEPIQYIVGFQSFYGYPFKVNENCLIPRPETEEVMLHFLNGC------HSQGS 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---TNGVSERFDTLQSDW 157
           I+D+GTG+GA+ + + K +P  K +  D+  + L IA+ NA     + +  + D L+   
Sbjct: 113 IVDVGTGSGAIAITIKKLNPQLKVIATDLYKETLTIAQENASYLDADIIFMQGDVLKPLI 172

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             +++   D ++SNPPYI       +   V  ++P  +L    +G + Y  I D + + L
Sbjct: 173 QKNIK--VDGLISNPPYISEKETCQMTNTVLKYEPHHALFAENNGFAIYEAILDDLPKVL 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262
           N+D   + EIGY Q + + ++   R   L V   KD  G DR++ F
Sbjct: 231 NEDAFVTFEIGYQQGLQLKQLVLQRYPKLDVKVTKDINGLDRIVSF 276


>gi|262201849|ref|YP_003273057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gordonia bronchialis DSM 43247]
 gi|262085196|gb|ACY21164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gordonia bronchialis DSM 43247]
          Length = 314

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 12/239 (5%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           +R     A+ R      +  I G   F  V L +    F PRPETEL+V+ AL   LP  
Sbjct: 64  RRAEFEAAVDRRAAGVPLQHITGRVGFGTVELAVGPGVFIPRPETELIVEWAL-RRLPSP 122

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----E 148
           ++R  +RI+DL +G+GA+ LA+    P  + V V++   AL   + N    G +      
Sbjct: 123 QRRAPLRIVDLCSGSGALALAIAHRLPAAEVVAVEVDDAALTWLRRNVERLGPAGRVHVH 182

Query: 149 RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R D    D  S++  +   D++VSNPPY+ +     +G EV   DP +++ GG DG+   
Sbjct: 183 RADVTDHDAMSALFDDASVDLVVSNPPYVPTTA--TVGAEVA-HDPDLAVYGGPDGMQVI 239

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             +  G++R L   G  ++E        VV+      +F  + + +D  G  R +   R
Sbjct: 240 TPMIAGIARVLAPGGSVAIEHDDTTAGLVVQELRDAGVFADIESHRDLAGRPRFVTAVR 298


>gi|118619168|ref|YP_907500.1| modification methylase HemK [Mycobacterium ulcerans Agy99]
 gi|118571278|gb|ABL06029.1| modification methylase HemK [Mycobacterium ulcerans Agy99]
          Length = 282

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 9/235 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           PD  LD        + +    +   +  ++G   F  V L +    F PRPETE +++ A
Sbjct: 45  PDDPLDSDALGQYQDMVTARSRRVPLQHLIGTVQFGPVELQVGPGVFVPRPETEAVLEWA 104

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  L      D V I+DL TG+GA+ +AL    P  + +GVD S  ALE A  N+V   
Sbjct: 105 GAQQL----SEDPV-IVDLCTGSGALAVALANRWPTARILGVDDSAAALEYAHRNSVGTK 159

Query: 146 VS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V   R D         ++G  D++V+NPPYI    V  L  EV   DP  +L GG +G++
Sbjct: 160 VELVRADVTTPGLMPELDGQVDLVVTNPPYIPDGAV--LEPEVAQHDPHRALFGGPNGMA 217

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
               +     R L   G  +VE         V+  ES  +F  + A +D  G  R
Sbjct: 218 VIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVKCIESAGVFEDIVARQDLAGRPR 272


>gi|330466247|ref|YP_004403990.1| modification methylase, HemK family protein [Verrucosispora maris
           AB-18-032]
 gi|328809218|gb|AEB43390.1| modification methylase, HemK family protein [Verrucosispora maris
           AB-18-032]
          Length = 272

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 107/215 (49%), Gaps = 18/215 (8%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E +  +LGW +F   R+T+    F PR  T  LV +A A + P        R+++
Sbjct: 47  RRVAGEPLEYLLGWAEFCGERITVVPGVFVPRARTAALVAAAEAVTGP------AARVVE 100

Query: 104 LGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW 157
           L  G+GA+  AL +   +P      VD+   A+  A+ N    AV     + FD L + W
Sbjct: 101 LCCGSGALTRALARRLHAPRLLA-AVDVDPAAVACARGNLAELAVPVYAGDLFDALPATW 159

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                G  D++V+N PY+ +  +D L  E R ++  ++LDGG DGL+  R +A   +R L
Sbjct: 160 ----RGTLDLVVANAPYVPTAALDLLPAESRRYEALVALDGGPDGLAVLRRLAADATRWL 215

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
              G   VE+G +Q VD++    +    L + F+D
Sbjct: 216 APGGHLVVEVGQSQ-VDLLATVLAEAGLLPSTFRD 249


>gi|333027514|ref|ZP_08455578.1| putative methytransferase [Streptomyces sp. Tu6071]
 gi|332747366|gb|EGJ77807.1| putative methytransferase [Streptomyces sp. Tu6071]
          Length = 287

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 5/214 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  ++G   F+ +R+ +    F PR  +E LV    A +L  +     V +
Sbjct: 38  VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLV----ARALDGVRAEGAVTL 93

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL  G+GA+ LAL     P       D+   AL  A+ N    G       L +   ++
Sbjct: 94  LDLCCGSGALGLALRTALGPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAA 153

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+ +N PY+ S  V  L  E R  +P ++LDGG DGL   R +A+  +  L   
Sbjct: 154 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLVALDGGRDGLDLVRRVAEEAATWLAPG 213

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           G   VE G  Q  +V  IF +  L    A ++ G
Sbjct: 214 GRLLVESGERQAPEVAGIFTAAALHAEIAHEEEG 247


>gi|222099157|ref|YP_002533725.1| HemK protein [Thermotoga neapolitana DSM 4359]
 gi|221571547|gb|ACM22359.1| HemK protein [Thermotoga neapolitana DSM 4359]
          Length = 255

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 34/263 (12%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            +V G+    V+   D ++ ++++  +   + +      +H ILG ++F  +   +    
Sbjct: 14  AKVLGVRKEDVVTK-DIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFMGLSFFVEEGV 72

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           F PRPETE LV+ AL      I++  +  + D+GTG+GA+ +++ K    F G      D
Sbjct: 73  FIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK----FSGAIVFATD 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE---SVIVDC 182
           IS KA+E++  NA  +GV +RF   +  +    E  +   ++I+SNPPY++    +  D 
Sbjct: 125 ISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKMEMILSNPPYVKMSARLPQDV 184

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L      F+P  +L  G DGL  YR       R+  +  +  +EIG +Q      + E +
Sbjct: 185 L------FEPSEALFAGEDGLDFYREF---FRRYSTEGKIVLMEIGEDQ------VEELK 229

Query: 243 KLFLVNAF-KDYGGNDRVLLFCR 264
           K+    AF KD  G  R L   R
Sbjct: 230 KIVPGAAFLKDTSGRYRFLHINR 252


>gi|56479090|ref|YP_160679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aromatoleum aromaticum EbN1]
 gi|56315133|emb|CAI09778.1| Adenine specific methylase, HemK family [Aromatoleum aromaticum
           EbN1]
          Length = 311

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 6/166 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   LDL TG+G + + +    P  + VG D+S +AL++A++N     + +R + L+SD 
Sbjct: 144 VTSALDLCTGSGCLAILMAHAFPNAQIVGADLSDEALQVARANVSDYDLDDRVELLKSDV 203

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F+ + G  FD+I+SNPPY+ +  +  L  E    +PR++L  G DGL   R +  G   H
Sbjct: 204 FAGLAGRRFDLIISNPPYVTADAMATLPPEYL-HEPRMALAAGEDGLDIVRRLLAGAKAH 262

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           LN  G+ +VE+G+N+ + V   F       ++A    GG+D V + 
Sbjct: 263 LNPGGMLAVEVGHNRYL-VEEAFPDLSPVWLSA---QGGDDMVFVL 304


>gi|241855543|ref|XP_002416030.1| n6-DNA-methyltransferase, putative [Ixodes scapularis]
 gi|215510244|gb|EEC19697.1| n6-DNA-methyltransferase, putative [Ixodes scapularis]
          Length = 222

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 103/214 (48%), Gaps = 22/214 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG  DF+N+ L +    F PRPETE LVD  L+  L R  K   V  LD+G GTGA
Sbjct: 8   VQYILGEWDFHNITLKMQPPIFIPRPETENLVDIVLSH-LKRTPKSSTV--LDIGCGTGA 64

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV------------SERFDTLQSDWF 158
           +CLA L  +      GVD + KA++++K NA    +            S   DT  S   
Sbjct: 65  ICLA-LGNAAQIHCTGVDKNPKAVKLSKENATNLNLAHCATFHEAEISSHGIDTAYSPLL 123

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           + V   +DVIVSNPPYI +     L  EV  ++   +L  G  GL   + I      +L 
Sbjct: 124 NQV---YDVIVSNPPYISTEEAKDLEPEVLRYEDHGALFAGPRGLDMVQNILRYSRTNLR 180

Query: 219 KDGLCSVEIGYNQKV---DVVRIFESRKLFLVNA 249
             G   +E+G +      +++R  E  +L  ++A
Sbjct: 181 VGGHLFLEVGLSHPPLIRNILRTPEYNQLLRLHA 214


>gi|294671088|ref|ZP_06735943.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307196|gb|EFE48439.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 299

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P      VDIS  ALE+A  N    G+ +R
Sbjct: 123 PWIEYDELVHTALDLCTGSGCLAIQMAHHYPAADVDAVDISLDALEVAAVNVEDYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + + +D F  +EG +D+IVSNPPY+++  V  L  E    +P  +L  G DGL   R I
Sbjct: 183 INLIHTDLFEGLEGTYDLIVSNPPYVDAESVAELPPEYL-HEPEEALGSGEDGLDATRQI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
               ++ LN  G+  VEIG+N+ V
Sbjct: 242 ILQAAKFLNPRGVLLVEIGHNRDV 265


>gi|326332908|ref|ZP_08199165.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
 gi|325949266|gb|EGD41349.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
          Length = 285

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 18/216 (8%)

Query: 29  VLD-DRQRFFLTNAIV------------RSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           VLD DR R FL + +             R  + E +  + G   F +V L +    F PR
Sbjct: 34  VLDTDRNRRFLVDDVAEHEEKAYADLLARRARREPLQHLTGVAYFRHVELAVGPGVFVPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETELL      +++ R    D   ++DL TG+GA+  ++  E P  +   V++S  A  
Sbjct: 94  PETELLA----GWAIDRATAIDTPVVVDLCTGSGAIAKSIADEVPGAEVHAVELSEDAYP 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A  N    GV  R   + +D F+ + G  DV+V NPPYI     + +  E RD DP ++
Sbjct: 150 WAVRNLTGTGVDLRQGDM-ADAFADLHGGVDVLVCNPPYIPLEAWESVAREARDHDPDLA 208

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           L  G DGL   R +    +  L   G+   E    Q
Sbjct: 209 LFSGQDGLDAIRVLERRAAELLRPGGVVGFEHADEQ 244


>gi|295425485|ref|ZP_06818178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus
           amylolyticus DSM 11664]
 gi|295064824|gb|EFG55739.1| protein-(glutamine-N5) methyltransferase [Lactobacillus
           amylolyticus DSM 11664]
          Length = 280

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 120/253 (47%), Gaps = 19/253 (7%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  +  +  D  L D Q       I +  K  S   ILG+  F   ++ +      PR
Sbjct: 33  GLTPSEFELKQDLELSDAQVKQANKDIKKLAKGISPQYILGYAWFLGYKIMVQRGVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-----DIS 130
            ETE LV+    ++L  +   D  ++LDLGTG+G + +AL KE+       +     D++
Sbjct: 93  FETEELVE----WALKSLHNGD--QVLDLGTGSGCIAIALAKEAEKKHIADLHLTISDVT 146

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVR 188
             AL IA+ N +T  V    D L     + + GL  FD I+SNPPYI+   V  +   V 
Sbjct: 147 DTALRIAEENLLTYSV----DALVRK-ANCLIGLAKFDKIISNPPYIKKSEVKDMDQNVL 201

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
             +P  +L GG DGL  YR  A  V  HLN  G   +E G++++  +  +F +    F +
Sbjct: 202 QNEPDTALFGGDDGLDFYRKFAKEVRDHLNSHGEFFMEFGFSEEQQLRELFSAELPDFEI 261

Query: 248 NAFKDYGGNDRVL 260
              KD  G  R++
Sbjct: 262 EFRKDMAGKPRMI 274


>gi|271963195|ref|YP_003337391.1| modification methylase,HemK family [Streptosporangium roseum DSM
           43021]
 gi|270506370|gb|ACZ84648.1| modification methylase,HemK family [Streptosporangium roseum DSM
           43021]
          Length = 284

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 10/205 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
             + R    E +  I G   F  + L +    F PRPETE++      +++ R+ + DV 
Sbjct: 56  EGVARREAREPLQHITGRAYFRYLSLEVGPGVFVPRPETEVVA----GWAIERLREMDVA 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--S 155
              ++DLGTG+GA+ L++ +E        V++   A   AK N + +G        +  +
Sbjct: 112 SPVVVDLGTGSGAIALSIAQEIALATVHAVEVDPDAYRWAKRNILEHGQGRVHLHPEDLA 171

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVS 214
           D  S + G  D+++SNPPYI    +     EVRD+DP  +L G G DGL   R +     
Sbjct: 172 DALSELNGQVDLVISNPPYIPPGAI-PRDPEVRDYDPHRALYGSGSDGLDEVRAVERTAR 230

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239
           R L   G  +VE    Q   V  IF
Sbjct: 231 RLLRPGGFVAVEHADEQGTPVYLIF 255


>gi|15840750|ref|NP_335787.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551]
 gi|13880942|gb|AAK45601.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551]
 gi|323720257|gb|EGB29356.1| hypothetical protein TMMG_01996 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 304

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 67  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|121637229|ref|YP_977452.1| putative hemk protein homolog hemK [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989704|ref|YP_002644391.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121492876|emb|CAL71347.1| Probable hemk protein homolog hemK [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772817|dbj|BAH25623.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 325

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 88  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILGWATAQSLP---ARPL--IVDACTGSG 142

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|302339535|ref|YP_003804741.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636720|gb|ADK82147.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta smaragdinae DSM 11293]
          Length = 309

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 20/269 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G+    V V     L +++       I + L    +  + G R+F+ +  
Sbjct: 36  DASLLLAHAAGIDRTTVFVRLPDRLSEKEANRFRTLIHKRLTGTPVSYLTGRREFWGLDF 95

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALLK 117
            +++    PRP+TE LV++AL      +++ +         +RILDL  G+G + +AL  
Sbjct: 96  LVNNAVLIPRPDTETLVEAALEAIGAGMQEAEPGKGMRGGGLRILDLCCGSGCIGIALAS 155

Query: 118 ESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPY 174
           E P  + V  DIS  A++ A  N      V +    ++SD F  +  +  FD+IV+NPPY
Sbjct: 156 ELPEAEVVLSDISSAAVDTALRNRQRLLPVDQDIVVMRSDLFGGLFAMAPFDLIVTNPPY 215

Query: 175 I---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYN 230
           +   E+  +   G E    +P  +L GG +GLS  R I    SRH L  +G   +E   +
Sbjct: 216 LTDDEAEAMASAGWE----EPDGALRGGKEGLSLIRKIIP-ASRHVLRSEGYLFIESAPS 270

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           Q  ++ R+ +      V+  KD  G DRV
Sbjct: 271 QSGEISRMLQEEGFLKVSVKKDLAGRDRV 299


>gi|261368037|ref|ZP_05980920.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile
           DSM 15176]
 gi|282570025|gb|EFB75560.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile
           DSM 15176]
          Length = 276

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 104/224 (46%), Gaps = 13/224 (5%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R    E +  +LG  DF +  L +      PR ++E++ ++A+      +       +L
Sbjct: 55  TRRAAREPLQYLLGEWDFLDFTLKVGPGVLCPRADSEVVCETAIEL----LRNVPHPTVL 110

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DL  GTG + L + +  P  +   V+ S  A    ++N +  GV    +T+++D FS   
Sbjct: 111 DLCAGTGCLGLGVARAYPDARVTCVEKSGDAWPYLQANTMDTGV----ETVRADVFSWYR 166

Query: 163 GL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            L     D+I+SNPPY+ +  +  L  E    +P ++LDGG DGL  YR +       L 
Sbjct: 167 TLAPESVDLILSNPPYLTAGEMRALMPET-SHEPAMALDGGTDGLDFYRLLCARYKAALR 225

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             G   +EIG  Q   V+ +            KDYGGNDRV++ 
Sbjct: 226 PGGWLVLEIGCAQAAQVLALGGQYGWQNGRCRKDYGGNDRVVVL 269


>gi|215430187|ref|ZP_03428106.1| hypothetical protein MtubE_05798 [Mycobacterium tuberculosis
           EAS054]
          Length = 289

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 67  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|224825464|ref|ZP_03698569.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Lutiella nitroferrum 2002]
 gi|224602385|gb|EEG08563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Lutiella nitroferrum 2002]
          Length = 300

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V R LDL TG+G + + +    P  +   VDIS  ALE+A  N    G+ +R
Sbjct: 123 PWIEHPELVHRALDLCTGSGCLAIQMAHHYPDAQIDAVDISLDALEVASINVQRYGLEDR 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +E  +D+I+SNPPY++   VD L  E    +P ++L  G DGL   R I
Sbjct: 183 IQLVHTDLFQGLEEKYDLIISNPPYVDEESVDDLPAEYL-HEPELALGSGRDGLDATREI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
                  L + G+  VEIG+N+ V
Sbjct: 242 LRRAPEFLTEHGVLLVEIGHNRDV 265


>gi|15828577|ref|NP_325937.1| protoporphirogen oxidase HEMK [Mycoplasma pulmonis UAB CTIP]
 gi|14089519|emb|CAC13279.1| PROTOPORPHIROGEN OXIDASE HEMK [Mycoplasma pulmonis]
          Length = 230

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 21/210 (10%)

Query: 27  DSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           D ++ +++R+ L N I +       K+  + +I+G+ +  NV++ +      PR ETE L
Sbjct: 5   DDLILEKRRYNLNNKISQKEKRLLKKNMPVQKIIGYIEMANVKIDICHKVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           +     F       +D +++LDL  G+G + +AL K     K + +   DIS +A++  +
Sbjct: 65  IFLVKDFL------KDDMKVLDLCAGSGFIGIALSK----MKKIDLTLSDISLEAIKQIE 114

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N   N V + +  +QSD F +++G FD+IVSNPPY+       +   V+ F+P  +L  
Sbjct: 115 KNVKINNV-KNYKIIQSDLFENIQGDFDIIVSNPPYLSY--EQKIDKSVKFFEPLKALYA 171

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +G   Y  I +  S  L KDG+   EI 
Sbjct: 172 PKNGWYFYEKIIEKASSFLKKDGMLFFEIN 201


>gi|269794321|ref|YP_003313776.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sanguibacter keddieii DSM 10542]
 gi|269096506|gb|ACZ20942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sanguibacter keddieii DSM 10542]
          Length = 312

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 18/224 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G   F +V L +    F PRPETE++   A+  +L  + +R  V ++DL TG+GA
Sbjct: 86  LQHLTGTAPFRHVELDVGPGVFVPRPETEVVAQVAVDEALRVVAERGRVVVVDLCTGSGA 145

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDV 167
           + +A+ +E P  +   V++   A   A+ N   + ++ R   ++ D     ++++GL DV
Sbjct: 146 IAVAIAQEVPEAEVHAVELDAAAHAWARRN--VDRIAPRVTLVRGDARTALTALDGLCDV 203

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +VSNPPY+ +  V     EV + DP ++L G G DGL   R +    SR L + GL  +E
Sbjct: 204 VVSNPPYVPTGAVPK-DREVAEHDPAVALYGLGPDGLEVPRGVTRAASRLLVRGGLYVME 262

Query: 227 ------IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                  G  Q VD    FE  +        D  G  R+++  R
Sbjct: 263 HAEVQDAGARQMVDDTGDFEPAR-----TLPDLTGRPRMVVARR 301


>gi|260642491|ref|ZP_05859415.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii
           DSM 17565]
 gi|260621883|gb|EEX44754.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii
           DSM 17565]
          Length = 247

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 114/255 (44%), Gaps = 12/255 (4%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           + G     + +  D +L + +   L N I R  K+E I  I G+  F   +  ++     
Sbjct: 1   MLGFDPLDIYLGKDMILSECKERELENIIFRLQKNEPIQYIRGFAVFGGRKFKVAPGVLI 60

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPET  LVD  +       E      +LD+GTG+G + ++L K  P       DIS +A
Sbjct: 61  PRPETAELVDWVVN------ENPGAHHLLDIGTGSGCIAISLDKRLPDADVEAWDISEEA 114

Query: 134 LEIAKSNAV---TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           L IA++N     +  +  + D L  DW  S    FDVIVSNPPY+     D +   V D+
Sbjct: 115 LAIARTNNEELESRVLFRQRDVLSDDWEKSPS--FDVIVSNPPYVTEAEKDEMEANVLDW 172

Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +P ++L     D L  YR IA      L  +G    EI      ++  + E  +   +  
Sbjct: 173 EPALALFVPDDDPLRFYRRIATLGRELLLPEGKLYFEINRAFGREIAYMLEMNQYRDIRV 232

Query: 250 FKDYGGNDRVLLFCR 264
            KD  G DR++   R
Sbjct: 233 IKDIFGKDRIVTANR 247


>gi|281411709|ref|YP_003345788.1| modification methylase, HemK family [Thermotoga naphthophila
           RKU-10]
 gi|281372812|gb|ADA66374.1| modification methylase, HemK family [Thermotoga naphthophila
           RKU-10]
          Length = 282

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 127/263 (48%), Gaps = 34/263 (12%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            +V G+    V+   D ++ ++++  +   + +      +H ILG ++F  +   +    
Sbjct: 41  AKVLGVRKEDVVTK-DIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFMGLSFFVEEGV 99

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           F PRPETE LV+ AL      I++  +  + D+GTG+GA+ +++ K    F G      D
Sbjct: 100 FIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK----FSGAIVFATD 151

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE---SVIVDC 182
           IS KA+E++  NA  +GV +RF   +  +    E  +   ++I+SNPPY++    +  D 
Sbjct: 152 ISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKIEMILSNPPYVKMSARLPQDV 211

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L      F+P  +L  G DGL  YR       R+  +  +  +EIG +Q      + E +
Sbjct: 212 L------FEPSEALFAGEDGLDFYREF---FRRYSTEGKIVLMEIGEDQ------VEELK 256

Query: 243 KLFLVNAF-KDYGGNDRVLLFCR 264
           K+    AF KD  G  R L   R
Sbjct: 257 KIVPGAAFLKDTSGRYRFLHINR 279


>gi|289753377|ref|ZP_06512755.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054]
 gi|289693964|gb|EFD61393.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054]
          Length = 310

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 88  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|148543688|ref|YP_001271058.1| HemK family modification methylase [Lactobacillus reuteri DSM
           20016]
 gi|184153098|ref|YP_001841439.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
           1112]
 gi|227363333|ref|ZP_03847462.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|325682059|ref|ZP_08161577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM4-1A]
 gi|148530722|gb|ABQ82721.1| modification methylase, HemK family [Lactobacillus reuteri DSM
           20016]
 gi|183224442|dbj|BAG24959.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
           1112]
 gi|227071640|gb|EEI09934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|324978703|gb|EGC15652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM4-1A]
          Length = 288

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 7/205 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +  +AI R L HE    I+G   FY     ++ +   P  ET  L+D  L     R    
Sbjct: 60  WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELIDWVLQEMPSR---- 115

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LDLGTG+G + + L  E P +     DIS  AL +A+ N     +      ++SD
Sbjct: 116 -PLKVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAVAQENMAKFNL--ELPLIKSD 172

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +++  +D+IV+NPPYI+      +   V + +P ++L     GL  Y  +     ++
Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAVLENEPALALFANERGLGFYHRLFKQAGQY 232

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241
           L   G    E GY+Q+  +  +   
Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257


>gi|161507267|ref|YP_001577221.1| protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571]
 gi|160348256|gb|ABX26930.1| Protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571]
          Length = 280

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 19/258 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D VL D Q       I +  K  S   ILG+  F+  ++ +   
Sbjct: 28  LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKIMVQRG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+    ++L  ++  D  ++LDLGTG+G + +AL KE+   KG+     
Sbjct: 88  VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++     + 
Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F +++L
Sbjct: 198 ANVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +   KD  G  R++
Sbjct: 257 PDFDIEFRKDMAGKPRMV 274


>gi|237719658|ref|ZP_04550139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450927|gb|EEO56718.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 232

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 104/231 (45%), Gaps = 12/231 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L N I R  K+E I  I G  +F      ++S    PRPET  LV+  +       E  +
Sbjct: 10  LENIIFRLQKNEPIQYIRGIAEFCGRNFKVASSVLIPRPETAELVELIVE------ENPN 63

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154
             R+LD+GTG+G + ++L K+ P  +    DIS +AL IA+ N        RF   D L 
Sbjct: 64  ARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISEEALAIARKNNDALEARVRFLQRDVLA 123

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213
            DW       FDVIVSNPPY+     + +   V D++P ++L     D L  Y  IA   
Sbjct: 124 DDWEKIPS--FDVIVSNPPYVTETEKNEMDANVLDWEPGLALFVPDEDPLRFYNRIARLG 181

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           S  L   G    EI      +   I E  +   V   +D  G DR++   R
Sbjct: 182 SELLLPGGKLYFEINQAYGRETAHILEMNQYRDVRVIRDIFGKDRIVTANR 232


>gi|31792493|ref|NP_854986.1| hypothetical protein Mb1332 [Mycobacterium bovis AF2122/97]
 gi|148822518|ref|YP_001287272.1| hypothetical protein TBFG_11327 [Mycobacterium tuberculosis F11]
 gi|215403142|ref|ZP_03415323.1| hypothetical protein Mtub0_05481 [Mycobacterium tuberculosis
           02_1987]
 gi|215410939|ref|ZP_03419747.1| hypothetical protein Mtub9_06320 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426622|ref|ZP_03424541.1| hypothetical protein MtubT9_09609 [Mycobacterium tuberculosis T92]
 gi|215445478|ref|ZP_03432230.1| hypothetical protein MtubT_05888 [Mycobacterium tuberculosis T85]
 gi|218753008|ref|ZP_03531804.1| hypothetical protein MtubG1_05990 [Mycobacterium tuberculosis GM
           1503]
 gi|253799654|ref|YP_003032655.1| hypothetical protein TBMG_02680 [Mycobacterium tuberculosis KZN
           1435]
 gi|254231558|ref|ZP_04924885.1| hypothetical protein hemK [Mycobacterium tuberculosis C]
 gi|254364197|ref|ZP_04980243.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem]
 gi|254550308|ref|ZP_05140755.1| hypothetical protein Mtube_07589 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186239|ref|ZP_05763713.1| hypothetical protein MtubCP_09453 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260200353|ref|ZP_05767844.1| hypothetical protein MtubT4_09543 [Mycobacterium tuberculosis T46]
 gi|260204558|ref|ZP_05772049.1| hypothetical protein MtubK8_09658 [Mycobacterium tuberculosis K85]
 gi|289442739|ref|ZP_06432483.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46]
 gi|289446895|ref|ZP_06436639.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A]
 gi|289554910|ref|ZP_06444120.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605]
 gi|289573963|ref|ZP_06454190.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745046|ref|ZP_06504424.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749854|ref|ZP_06509232.1| hypothetical protein hemK [Mycobacterium tuberculosis T92]
 gi|289757400|ref|ZP_06516778.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761455|ref|ZP_06520833.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503]
 gi|294994857|ref|ZP_06800548.1| hypothetical protein Mtub2_10184 [Mycobacterium tuberculosis 210]
 gi|297633852|ref|ZP_06951632.1| hypothetical protein MtubK4_07004 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730839|ref|ZP_06959957.1| hypothetical protein MtubKR_07094 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524804|ref|ZP_07012213.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A]
 gi|306781617|ref|ZP_07419954.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002]
 gi|306784024|ref|ZP_07422346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003]
 gi|306788387|ref|ZP_07426709.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004]
 gi|306792714|ref|ZP_07431016.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005]
 gi|306797120|ref|ZP_07435422.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006]
 gi|306803000|ref|ZP_07439668.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008]
 gi|306807190|ref|ZP_07443858.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007]
 gi|306967389|ref|ZP_07480050.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009]
 gi|313658171|ref|ZP_07815051.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mycobacterium tuberculosis KZN V2475]
 gi|31618082|emb|CAD94193.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium bovis AF2122/97]
 gi|124600617|gb|EAY59627.1| hypothetical protein hemK [Mycobacterium tuberculosis C]
 gi|134149711|gb|EBA41756.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem]
 gi|148721045|gb|ABR05670.1| hypothetical protein hemK [Mycobacterium tuberculosis F11]
 gi|253321157|gb|ACT25760.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 1435]
 gi|289415658|gb|EFD12898.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46]
 gi|289419853|gb|EFD17054.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A]
 gi|289439542|gb|EFD22035.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605]
 gi|289538394|gb|EFD42972.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289685574|gb|EFD53062.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690441|gb|EFD57870.1| hypothetical protein hemK [Mycobacterium tuberculosis T92]
 gi|289708961|gb|EFD72977.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503]
 gi|289712964|gb|EFD76976.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494598|gb|EFI29892.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A]
 gi|308325579|gb|EFP14430.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002]
 gi|308331257|gb|EFP20108.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003]
 gi|308335073|gb|EFP23924.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004]
 gi|308338881|gb|EFP27732.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005]
 gi|308342495|gb|EFP31346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006]
 gi|308346429|gb|EFP35280.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007]
 gi|308350300|gb|EFP39151.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008]
 gi|308355001|gb|EFP43852.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009]
 gi|326902922|gb|EGE49855.1| hypothetical protein hemK [Mycobacterium tuberculosis W-148]
 gi|328459400|gb|AEB04823.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 4207]
          Length = 325

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 103/221 (46%), Gaps = 13/221 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 88  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 142

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 143 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 202

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 203 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 260

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           VE         V +  S KLF+ V A KD  G  R +   R
Sbjct: 261 VEHDDTTSSSTVDLVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|34556665|ref|NP_906480.1| protoporphyrinogen oxidase [Wolinella succinogenes DSM 1740]
 gi|34482379|emb|CAE09380.1| PROTOPORPHYRINOGEN OXIDASE [Wolinella succinogenes]
          Length = 283

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 13/234 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +++L D +     + + R L+ E I  IL    FY+    ++S    PRPETE+L+D A 
Sbjct: 46  ETLLSDEESQNYQSLLKRRLQGEPIEYILERASFYSRDFYVASGVLIPRPETEILIDWAS 105

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +     I    + R+ ++G G+G +   L    P       DIS +ALE+A+ N    G 
Sbjct: 106 SL----IASHPICRVAEVGIGSGIISSTLALLHPHLTFEASDISPRALEVARENLKRMGA 161

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             R           +EG FD+++SNPPYI         L   +F+P  +L GG  G    
Sbjct: 162 ESRITLHLGSLLEPLEGEFDLLLSNPPYIAQNTPLPKPL---NFEPSEALFGGERG---- 214

Query: 207 RTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             + + + +   K  +  +  E+GY+Q+  + R  E      +  ++D  G DR
Sbjct: 215 SELLEELIKEAQKRSIPYMIAEMGYDQRGAIERFMERIPHQELRFYQDLAGLDR 268


>gi|87300984|ref|ZP_01083826.1| modification methylase, HemK family protein [Synechococcus sp. WH
           5701]
 gi|87284855|gb|EAQ76807.1| modification methylase, HemK family protein [Synechococcus sp. WH
           5701]
          Length = 334

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%), Gaps = 10/218 (4%)

Query: 48  HESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILD 103
           H  +  ++G   WR+F    L +S     PR ETE+L D ALA +L         +   D
Sbjct: 96  HTPLQYLVGVCPWREF---SLAVSPAVLIPRQETEVLADLALALALALPAPAHRPLTWAD 152

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           LGTG+G + LAL + +P  +G+ VD S +AL  A+ N    G+ +R       W+  +  
Sbjct: 153 LGTGSGCLALALARAAPKARGLAVDCSAQALAQAEINLEEAGLLDRVTLHLGQWWEPLRP 212

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  D++VSNPPYI + ++  L   VR+ +P ++LDGG DGL   R +A G    L   
Sbjct: 213 HWGGLDLVVSNPPYIPTAVLVELEPLVREHEPHLALDGGPDGLEAIRALASGAWAALAPG 272

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G   +E  ++Q   V  +  +  L  V + +D  G  R
Sbjct: 273 GWLLLEHHHDQSHAVAELLLACGLVEVTSHRDLEGRWR 310


>gi|320333669|ref|YP_004170380.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus maricopensis DSM 21211]
 gi|319754958|gb|ADV66715.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus maricopensis DSM 21211]
          Length = 279

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 7/178 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +LG  ++ +V L ++     PRPETE+L+   LA S  R      V  LD+GTGTG
Sbjct: 73  PLQHLLGSVEWGDVALRVTPAALVPRPETEVLLH--LALSALRGVPEPCV--LDVGTGTG 128

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ +A+    P       D+S  AL +A+ NA  NG    F  L +D          ++V
Sbjct: 129 ALAVAVAHARPDAHVTATDVSDDALALARENATRNGTRVAF--LHADLLHGAPTGLHLVV 186

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           SNPPY+     +    EV+  DP ++L GG DGL   R +A     HL   G  ++E+
Sbjct: 187 SNPPYLPDADRENADPEVQ-HDPPLALYGGADGLDLARQLAAQAPAHLRPGGTLALEL 243


>gi|24582226|ref|NP_609031.2| CG9531 [Drosophila melanogaster]
 gi|7297118|gb|AAF52386.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +   +  +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|227529624|ref|ZP_03959673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
 gi|227350414|gb|EEJ40705.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
          Length = 286

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 25/255 (9%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           +H ++ + + +  D  ++F   AI R L  E    I+G   FY     ++ D   P  ET
Sbjct: 40  THLLVHNRELMPSDEWQWF-QGAIKRLLNEEPAQYIVGSAPFYGRTFMVNHDVLIPEAET 98

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             LVD  L     +      +++LDLGTG+G + + L  E P +     D+S  AL +A+
Sbjct: 99  AELVDWVL-----KENTSTPLKVLDLGTGSGVIGITLALERPQWNVTLSDVSPAALMVAQ 153

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N     ++ R   +QSD F+++    +D+IV+NPPYI       +   V  ++P ++L 
Sbjct: 154 KNMQRFNLNLRL--VQSDLFANLTNEKYDLIVTNPPYISHDATALMDRSVLKYEPELALF 211

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---------KVDVVRIFESR------ 242
              +GL  Y  +   ++ HL   G    E G++Q         +VD     E R      
Sbjct: 212 ADENGLGFYHRLFATIASHLTLQGQLFGETGFDQEQVIQELLHRVDRTAQIEPRHDVAGK 271

Query: 243 -KLFLVNAFKDYGGN 256
            ++  V  F + GGN
Sbjct: 272 MRMIHVWDFSNVGGN 286


>gi|116811593|emb|CAL25963.1| CG9531 [Drosophila melanogaster]
 gi|223966745|emb|CAR93109.1| CG9531-PA [Drosophila melanogaster]
 gi|223966747|emb|CAR93110.1| CG9531-PA [Drosophila melanogaster]
 gi|223966761|emb|CAR93117.1| CG9531-PA [Drosophila melanogaster]
 gi|223966763|emb|CAR93118.1| CG9531-PA [Drosophila melanogaster]
 gi|223966765|emb|CAR93119.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +   +  +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|116811589|emb|CAL25961.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +   +  +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|71907353|ref|YP_284940.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dechloromonas aromatica RCB]
 gi|71846974|gb|AAZ46470.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 299

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 6/133 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDL TG+G  CLA+L    F       VD+S  A+ +A+ N    G+ +R + +QSD F 
Sbjct: 136 LDLCTGSG--CLAILTALAFPNADVAAVDLSEHAIAVAERNVADYGLYDRIELIQSDAFK 193

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           S+EG  FD+IVSNPPY+ +  V  L  E    +P ++L  G DGL   R I     +HL 
Sbjct: 194 SLEGRKFDLIVSNPPYVNAESVAALPPEYL-HEPELALGSGEDGLDFTRIILREAKKHLT 252

Query: 219 KDGLCSVEIGYNQ 231
            +GL  VEIG+N+
Sbjct: 253 DNGLLIVEIGHNR 265


>gi|87160068|ref|YP_494717.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196021|ref|YP_500834.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|87126042|gb|ABD20556.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203579|gb|ABD31389.1| modification methylase, HemK family, putative [Staphylococcus
           aureus subsp. aureus NCTC 8325]
          Length = 250

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 31  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 84

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 85  IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 142

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 143 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 202

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 203 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 248


>gi|66816847|ref|XP_642405.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4]
 gi|60470445|gb|EAL68425.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4]
          Length = 343

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 37/260 (14%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + I R L +E I+ I+G+R F+  +   +  T  PRP++E +++  +  S  + ++  
Sbjct: 84  LQSFIERRLNNEPINYIIGYRYFWKNKFFCNHSTLIPRPDSETIIEKIIEES--KEKELK 141

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + +ILDLGTGTG + L+ L E     GVG+D S +AL IA  NA+   + +R   L  DW
Sbjct: 142 IKKILDLGTGTGCLLLSTLNEFKDSIGVGIDKSNEALIIANKNAIELSLDKRVSLLNFDW 201

Query: 158 F----SSVEGL----------------------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
                + +  L                      FD+++SNPPYI +     L   V +++
Sbjct: 202 NNYDKNQISKLLSSPSSSSPSSSSNTNNENNEKFDLVISNPPYISNEEFKYLNPIVTEWE 261

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS------VEIGYNQKVDVVRIFESRKLF 245
           P+ +L    +GL  Y++IA  ++   NKD L S       EIG  Q+ D+  I E++  F
Sbjct: 262 PKTALIADENGLKDYKSIASFLNE--NKDSLLSDNCLIVFEIGKGQEKDIQSIMENKYSF 319

Query: 246 LVNAF-KDYGGNDRVLLFCR 264
               + KD     R L+F +
Sbjct: 320 KYIGYKKDLNSIIRCLVFMK 339


>gi|297157198|gb|ADI06910.1| putative methyltransferase [Streptomyces bingchenggensis BCW-1]
          Length = 281

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 9/207 (4%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  I G   F  + L +    F PRPETE    S + +++  +   DVV
Sbjct: 56  EAVARREAREPLQHITGRAFFRYLELQVGPGVFVPRPETE----SVVGWAIDAVRAMDVV 111

Query: 100 R--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
              I+DL +G+GA+ LAL +E P  +   V++   AL  A+ N   + V     D L + 
Sbjct: 112 EPLIVDLCSGSGAIALALAQEVPRSRVHAVELDEGALRWARKNVEGSRVVLHHGDALTA- 170

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D+++SNPPYI     + +  E RD DP+++L  G DGL   R +     R 
Sbjct: 171 -LPELDGQVDLVISNPPYIPLTEWEYVAPEARDHDPQLALFSGEDGLDVIRGLERTAHRL 229

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK 243
           L   G+  +E    Q   V  IF   +
Sbjct: 230 LRHGGVVVIEHADTQGGQVPWIFTEER 256


>gi|195577026|ref|XP_002078374.1| GD22575 [Drosophila simulans]
 gi|194190383|gb|EDX03959.1| GD22575 [Drosophila simulans]
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 29/251 (11%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S  Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPE
Sbjct: 76  SYDQLQLNPGQ-LADLERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPE 129

Query: 78  TE----LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           TE    L++D          +    V +L++G G+GA+ L++L   P      ++ S  A
Sbjct: 130 TEEFMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAA 181

Query: 134 LEIAKSNAVTNGVSERFD----TLQSD-WFSSV--EGLFDVIVSNPPYIESVIVDCLGLE 186
             +A  NA   G+  RF+    T++ D +   V  +  +D+I+SNPPY+++     L  E
Sbjct: 182 TVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEVLKDKKYDLIISNPPYVKTEEFQFLHPE 241

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESR 242
           V  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R
Sbjct: 242 VVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGR 301

Query: 243 KLFLVNAFKDY 253
             F+      Y
Sbjct: 302 LKFIAGYSDQY 312


>gi|288562706|gb|ADC53569.1| FI13095p [Drosophila melanogaster]
          Length = 328

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 84  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 137

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 138 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 189

Query: 137 AKSNAVTNGVSERFD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +   +  +  +D+I+SNPPY+++     L  EV  
Sbjct: 190 AAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQFLHPEVVV 249

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 250 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 309

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 310 IAGYSDQY 317


>gi|289741777|gb|ADD19636.1| hemK methyltransferase family member 1 [Glossina morsitans
           morsitans]
          Length = 330

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 19/221 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTG 107
           +  ILG  DF ++ L  +   F PRPETE  V   +       E R+V   + +L++G G
Sbjct: 109 LQHILGEWDFMDLTLKTAPTVFIPRPETEEFVSKVIE------EYRNVKQPIDMLEVGCG 162

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFSS-- 160
           +GA+ LA+L   P      ++ S  A  +A  NA +  +S+RF      T ++++     
Sbjct: 163 SGAISLAILNALPHVTSTAIERSKVATTLAWENAKSLKLSDRFTPYNHTTSKNNYLPKEL 222

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +  FD+IVSNPPY+ +     L  EV  ++   +LDGG DGL   R + D    HL   
Sbjct: 223 ADRKFDLIVSNPPYVRTEEFPLLQPEVTLYENLNALDGGQDGLQIARLVFDLACLHLRPG 282

Query: 221 GLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDR 258
           G   +E+G      V  I   +   +L  ++++ D    DR
Sbjct: 283 GKLWLELGSEHPPLVKTIMNLKYEGRLRFISSYIDQYKRDR 323


>gi|319785044|ref|YP_004144520.1| modification methylase, HemK family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170932|gb|ADV14470.1| modification methylase, HemK family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 254

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 10/212 (4%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G  DF  ++L ++     PRPETELL  +AL  ++ R   R V R++D+  G G +  A+
Sbjct: 38  GRTDFMGLKLVVAPGVLVPRPETELLGSTAL--NVLRELNRPVPRVVDMCCGAGNLACAI 95

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVS 170
             + P  +    D++   +E    N    G++ R   LQ D F+S     +EG  D++V 
Sbjct: 96  GYKVPTARVWASDLTDSCVETTCRNVAHLGLAGRISVLQGDLFNSFSGLELEGTIDLVVC 155

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGY 229
           NPPYI    ++     + + +PR +   G  GLS H R I +    +L + G+   E+G 
Sbjct: 156 NPPYISEKRLENDRAHLMELEPREAFAAGPYGLSIHMRVIKE-AQHYLRQGGMLLFEVGL 214

Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
            Q   V+ + E  K +  +    +  G  RV+
Sbjct: 215 GQDRQVMSLVERSKAYESIRTVANKAGEARVV 246


>gi|302787959|ref|XP_002975749.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii]
 gi|300156750|gb|EFJ23378.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii]
          Length = 336

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 94/205 (45%), Gaps = 15/205 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +      PRPET+ L+D A A      E    V + DLGTG+GA+ + + 
Sbjct: 127 WRDLV---LGVQEGVLIPRPETKQLIDLAAAAMDGNSELARGVWV-DLGTGSGAIAIGIA 182

Query: 117 KESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
           +      G G    VD S  A+ +A++NA    + E    ++  W + +    G    IV
Sbjct: 183 R---LLDGRGSVIAVDASEVAIAVAEANARRYKLQEAVTLVKGSWLTPLRDEAGKLSGIV 239

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-G 228
           SNPPYI S  +  L  EV   +P  +LDGG+DG+ H   I  G    L   G  ++E  G
Sbjct: 240 SNPPYIPSRNLGRLQAEVGKHEPICALDGGVDGIDHLAEICQGACWALKSGGFLALETDG 299

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDY 253
             Q   V +I   +    +   KD+
Sbjct: 300 GEQAQTVAKILSDKPFEDIKVVKDF 324


>gi|149907916|ref|ZP_01896584.1| putative adenine-specific methylase [Moritella sp. PE36]
 gi|149808922|gb|EDM68853.1| putative adenine-specific methylase [Moritella sp. PE36]
          Length = 309

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+ TG+G + +AL    P  +   VDI   A+E+A+ N   +GV  +   +QSD F
Sbjct: 134 MRILDMCTGSGCIAIALSHAFPDSEIDAVDIEHGAIEVAEINIQEHGVENQVTPIQSDLF 193

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S++EGL +D+IVSNPPY++   +D L  E +  +P I L  G DGL     +       L
Sbjct: 194 SNLEGLRYDMIVSNPPYVDQEDIDNLPDEFK-HEPEIGLQSGFDGLELTLKMLAQAPDML 252

Query: 218 NKDGLCSVEIG 228
           N  GL  VEIG
Sbjct: 253 NDGGLLFVEIG 263


>gi|91776222|ref|YP_545978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylobacillus flagellatus KT]
 gi|91710209|gb|ABE50137.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Methylobacillus flagellatus KT]
          Length = 299

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 7/156 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            ELL DS      P IE  ++V    D+ TG+G + + L    P      VDIS  AL +
Sbjct: 116 AELLEDSLS----PWIEYPEMVESAADICTGSGCLGVLLANAFPNAHIDVVDISPDALAV 171

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A  N    G+ ++   ++SD FS+++G  +D+I+SNPPY+++  +  L  E R+ +P I+
Sbjct: 172 ASINIRNYGLEDQITAIESDMFSNLQGRTYDIIISNPPYVDASSMALLPQEYRN-EPEIA 230

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           L  G  GL H   + +   +HLN +GL  VEIG+N+
Sbjct: 231 LGSGPTGLDHTHVLLNEAKKHLNDNGLLVVEIGHNR 266


>gi|269941716|emb|CBI50123.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|329314802|gb|AEB89215.1| Modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329723986|gb|EGG60510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 277

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 58  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 170 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275


>gi|218296520|ref|ZP_03497248.1| modification methylase, HemK family [Thermus aquaticus Y51MC23]
 gi|218243062|gb|EED09594.1| modification methylase, HemK family [Thermus aquaticus Y51MC23]
          Length = 272

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 13/203 (6%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            P    + R R  L     R L    +  +LG  +F+ + L ++     PRPETE LV+ 
Sbjct: 44  PPPPGAEARARELLK----RRLSGYPLQYLLGEVEFFGLPLKVAEGVLIPRPETEGLVEL 99

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL+  LP        R+LD+GTGTGA+ LAL +  P  +    ++  +AL +A+ NA   
Sbjct: 100 ALSLPLP-----PRPRVLDVGTGTGAIALALKRHLPEAEVHATEVDPRALALAEENARRL 154

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G+   F  L++     + GL D+IVSNPPY+     +    E+  F+  ++L  G +GL 
Sbjct: 155 GLPVHF--LKAPLTGGLRGL-DLIVSNPPYLPEAYREVAPKEL-AFENPLALYAGPEGLD 210

Query: 205 HYRTIADGVSRHLNKDGLCSVEI 227
             R +A      L   G   +E+
Sbjct: 211 VARPLAGEAWEALRPGGFLLLEL 233


>gi|194468251|ref|ZP_03074237.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus reuteri 100-23]
 gi|194453104|gb|EDX42002.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus reuteri 100-23]
          Length = 288

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 7/205 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +  +AI R L HE    I+G   FY     ++ +   P  ET  L+D  L   +P     
Sbjct: 60  WWKDAITRLLNHEPAQYIVGQAPFYGRTFKVNKNVLIPEAETAELIDWVLQ-EMPSCP-- 116

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +++LDLGTG+G + + L  E P +     DIS  AL +A+ N     +      ++SD
Sbjct: 117 --LKVLDLGTGSGVIGITLALERPNWHVSLSDISPAALAVAQENMAKFNL--ELPLIKSD 172

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F +++  +D+IV+NPPYI+      +   + + +P ++L     GL  Y  +     ++
Sbjct: 173 LFENIDQQYDLIVTNPPYIDPDDTGEIDQAILENEPALALFANERGLGFYHRLFKQAGQY 232

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241
           L   G    E GY+Q+  +  +   
Sbjct: 233 LTTTGQIFGETGYDQEESIQELLHQ 257


>gi|289450591|ref|YP_003475654.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185138|gb|ADC91563.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 318

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 111/252 (44%), Gaps = 15/252 (5%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P +   + Q+ F   A+ R  + E    I G  +F        +    PR +TE+L ++A
Sbjct: 62  PAAAAAELQKKFRA-ALRRRDEGEPWAYIWGQINFLGREFFTDTSVLIPRSDTEILWEAA 120

Query: 86  LAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKS 139
           +A +    ++R   +RIL+L TG+G + ++LL E      P    V  DIS  A+ + + 
Sbjct: 121 VAGAKKIFQQRGRALRILELCTGSGCLIISLLNELAALNIPVELAVATDISAAAIRLVER 180

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           N            L  D    VE    G FD  ++NPPY+       L  EVR+++PR++
Sbjct: 181 NRQHLCPDLPLVRLTGDLLEPVEAAGLGEFDFCLANPPYVTPAEYTALPDEVRNYEPRLA 240

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCS----VEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   IDGL  YR I   V  +       +    VE G  Q+  +  + E+     V    
Sbjct: 241 LTDEIDGLDFYRRILHDVKLYGRNSKAAALYLWVEHGMTQRDAITEVAEAEGWLPVEYRD 300

Query: 252 DYGGNDRVLLFC 263
           DY G  RV  FC
Sbjct: 301 DYAGLPRVCGFC 312


>gi|260102571|ref|ZP_05752808.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075]
 gi|260083598|gb|EEW67718.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075]
 gi|328468716|gb|EGF39698.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus helveticus MTCC 5463]
          Length = 280

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 19/258 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D VL D Q       I +  K  S   ILG+  F+  ++ +   
Sbjct: 28  LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKIMVQRG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+    ++L  ++  D  ++LDLGTG+G + +AL KE+   KG+     
Sbjct: 88  VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++     + 
Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F +++L
Sbjct: 198 ENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +   KD  G  R++
Sbjct: 257 PDFDIEFRKDMAGKPRMV 274


>gi|295428704|ref|ZP_06821330.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|283471334|emb|CAQ50545.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus ST398]
 gi|295127374|gb|EFG57014.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
          Length = 277

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 58  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 170 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275


>gi|87122988|ref|ZP_01078848.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Marinomonas sp. MED121]
 gi|86161725|gb|EAQ63030.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Marinomonas sp. MED121]
          Length = 234

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 98/206 (47%), Gaps = 8/206 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L  V G+++      P+  + +  R      + + LK + I  ILG + F+   L
Sbjct: 30  DVQLLLAEVLGVNTSYFYTWPEKPVSEEDRARFDALLAQRLKGKPIAYILGCQAFWTFEL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TE LV+  L      I       I+DLGTGTGAV LAL  E       
Sbjct: 90  AVSEFTLIPRSDTECLVEIGLEL----IADVKSPSIVDLGTGTGAVALALASERHDANVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VD+  +A+E+A+ N     ++   D  QS WF +V    FD+IVSNPPYI+        
Sbjct: 146 AVDLIPEAVELARQN--NQKLNLNVDIQQSSWFDNVATTDFDLIVSNPPYIDPEDHHLDE 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIA 210
            +VR F+P+ +L     G S    IA
Sbjct: 204 GDVR-FEPKSALIADQKGYSDIEIIA 228


>gi|309803195|ref|ZP_07697292.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805667|ref|ZP_07699708.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 09V1-c]
 gi|309806343|ref|ZP_07700356.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 03V1-b]
 gi|309809925|ref|ZP_07703773.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 2503V10-D]
 gi|308164703|gb|EFO66953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165027|gb|EFO67269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 09V1-c]
 gi|308167327|gb|EFO69493.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 03V1-b]
 gi|308169713|gb|EFO71758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 279

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 18/258 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAEC-KNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADVLIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L  G DGL  YR     V +HLNK+G   +E G++QK  +  +F +++L
Sbjct: 198 QNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKNGHFFLEFGFSQKDLLAELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +    D  G  R++
Sbjct: 257 PEFTIEFKNDLAGKPRMV 274


>gi|116811575|emb|CAL25954.1| CG9531 [Drosophila melanogaster]
 gi|116811577|emb|CAL25955.1| CG9531 [Drosophila melanogaster]
 gi|116811581|emb|CAL25957.1| CG9531 [Drosophila melanogaster]
 gi|116811585|emb|CAL25959.1| CG9531 [Drosophila melanogaster]
 gi|116811587|emb|CAL25960.1| CG9531 [Drosophila melanogaster]
 gi|116811595|emb|CAL25964.1| CG9531 [Drosophila melanogaster]
 gi|223966749|emb|CAR93111.1| CG9531-PA [Drosophila melanogaster]
 gi|223966755|emb|CAR93114.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|57652139|ref|YP_186924.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus COL]
 gi|151222233|ref|YP_001333055.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510322|ref|YP_001575981.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141636|ref|ZP_03566129.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258453173|ref|ZP_05701164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5948]
 gi|262049284|ref|ZP_06022159.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30]
 gi|262052619|ref|ZP_06024813.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3]
 gi|282923105|ref|ZP_06330790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9765]
 gi|284025151|ref|ZP_06379549.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           132]
 gi|294850087|ref|ZP_06790824.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A9754]
 gi|304379298|ref|ZP_07362037.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|57286325|gb|AAW38419.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus COL]
 gi|150375033|dbj|BAF68293.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160369131|gb|ABX30102.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257859119|gb|EEV81976.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5948]
 gi|259159489|gb|EEW44539.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3]
 gi|259162649|gb|EEW47216.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30]
 gi|282593296|gb|EFB98293.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9765]
 gi|294823035|gb|EFG39467.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A9754]
 gi|302751998|gb|ADL66175.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304342157|gb|EFM08057.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315196949|gb|EFU27291.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140711|gb|EFW32563.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320143687|gb|EFW35464.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA177]
          Length = 278

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|119470803|ref|ZP_01613414.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7]
 gi|119446030|gb|EAW27309.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7]
          Length = 311

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E   V RILDL TG+G + +AL +     +   VDIS +ALE+   N     +S+R   
Sbjct: 135 VEPNSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLSDRVLP 194

Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +QSD FS VEG  +D+IV+NPPY+++  +  L  E    +P + L  G DGL   RTI  
Sbjct: 195 IQSDVFSGVEGQKYDLIVANPPYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILS 253

Query: 212 GVSRHLNKDGLCSVEIG 228
             S HL  +GL  VE+G
Sbjct: 254 EASNHLTDNGLLFVEVG 270


>gi|253733049|ref|ZP_04867214.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728957|gb|EES97686.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 278

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LINEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|223966751|emb|CAR93112.1| CG9531-PA [Drosophila melanogaster]
 gi|223966757|emb|CAR93115.1| CG9531-PA [Drosophila melanogaster]
 gi|223966759|emb|CAR93116.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|116811579|emb|CAL25956.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|49484341|ref|YP_041565.1| hypothetical protein SAR2205 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257426256|ref|ZP_05602671.1| modification methylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428914|ref|ZP_05605308.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257431523|ref|ZP_05607896.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257434232|ref|ZP_05610582.1| modification methylase [Staphylococcus aureus subsp. aureus E1410]
 gi|257437145|ref|ZP_05613185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M876]
 gi|282904786|ref|ZP_06312660.1| N5 glutamine methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906461|ref|ZP_06314312.1| protein-glutamine-N5 methyltransferase release factor-specific
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909430|ref|ZP_06317245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911682|ref|ZP_06319481.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914966|ref|ZP_06322746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M899]
 gi|282920295|ref|ZP_06328019.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925506|ref|ZP_06333160.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C101]
 gi|283958897|ref|ZP_06376342.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509034|ref|ZP_06667821.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510949|ref|ZP_06669648.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M809]
 gi|293547551|ref|ZP_06672226.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|297589816|ref|ZP_06948456.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|49242470|emb|CAG41186.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257270961|gb|EEV03134.1| modification methylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274256|gb|EEV05773.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257277764|gb|EEV08434.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257280871|gb|EEV11016.1| modification methylase [Staphylococcus aureus subsp. aureus E1410]
 gi|257283538|gb|EEV13665.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M876]
 gi|282312907|gb|EFB43308.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C101]
 gi|282316155|gb|EFB46536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282321169|gb|EFB51500.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M899]
 gi|282324447|gb|EFB54760.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326700|gb|EFB56998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282330411|gb|EFB59929.1| protein-glutamine-N5 methyltransferase release factor-specific
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282594819|gb|EFB99796.1| N5 glutamine methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C160]
 gi|283789615|gb|EFC28438.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919671|gb|EFD96744.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094738|gb|EFE25010.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466234|gb|EFF08761.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M809]
 gi|297576944|gb|EFH95658.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312437465|gb|ADQ76536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315193282|gb|EFU23680.1| hypothetical protein CGSSa00_02196 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 278

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|289670895|ref|ZP_06491970.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 281

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 7/222 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           ++ R    E +  + G R F+ + L +S  T  PR +TELLV+     +L R + R   R
Sbjct: 60  SVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTRPGRR 115

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA  + +    D     WF  
Sbjct: 116 AADLGTGSGAIALAISSERPQAQVIATDASAAALAMARRNAHKHDL-RNVDFRLGHWFGP 174

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL  
Sbjct: 175 LAGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLP 233

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G   +E G++Q   V  + ++     V  F+D    DRV L
Sbjct: 234 GGWLLLEHGWDQGEVVRALLQAVGFVQVATFQDLEARDRVTL 275


>gi|220934410|ref|YP_002513309.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995720|gb|ACL72322.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
          Length = 303

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 5/174 (2%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++   A   P I+   V R+LDL TG+G + +A     P  +    DIS  A
Sbjct: 110 PRSPIAELIEQGFA---PWIDPERVERVLDLCTGSGCIGIACAHAFPDARVDLSDISPDA 166

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ N   +GV++R   ++SD F  + G  +D+IVSNPPY+++  +  L  E R  +P
Sbjct: 167 LAVARENIRRHGVADRVRAIRSDLFEGLAGERYDLIVSNPPYVDAADMAALTPEFR-HEP 225

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + L  G DGL     I      HLN  G+  VE+G +Q+  + R+ ++   +L
Sbjct: 226 VLGLASGEDGLDATLRILRDAPEHLNPGGILVVEVGNSQEALMARLPDAPLTWL 279


>gi|116811591|emb|CAL25962.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|27819756|gb|AAL29142.2| SD04586p [Drosophila melanogaster]
          Length = 328

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 84  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 137

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 138 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 189

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 190 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 249

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 250 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 309

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 310 IAGYSDQY 317


>gi|332529975|ref|ZP_08405925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
 gi|332040448|gb|EGI76824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
          Length = 283

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 24/212 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLK 117
           +F+ + L +      PRP+TE LVD AL       +  D   +I+DLGTG+GAV LA+ +
Sbjct: 76  EFHGMPLQVDGRVLIPRPDTETLVDWALECLTDIGQAEDPPPQIIDLGTGSGAVALAMAR 135

Query: 118 ESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDT----LQSDWFSSVEGLFD 166
              F    G       +D+S  AL +A++NA      ER D     +   W + +   +D
Sbjct: 136 ---FLAQTGRTGEVHALDVSPDALALAQANA------ERLDLRVQFMLGAWLTGISARYD 186

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI         L     +PR++L  G DGL   R I      +L   G   +E
Sbjct: 187 LIVSNPPYIAEGDPHLAAL---GHEPRLALISGPDGLDAIRIIVRQAPDNLRPGGWLLLE 243

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            G++Q + V  +        V + +D  G +R
Sbjct: 244 HGWDQALAVRELLTRAGFADVQSRRDLAGIER 275


>gi|73662076|ref|YP_300857.1| rRNA or tRNA methylase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494591|dbj|BAE17912.1| putative rRNA or tRNA methylase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 278

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 16/237 (6%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           + +    +A  R L  E I  ILG + FY     ++     PRPETE      +     +
Sbjct: 51  QHKNLFDDATQRMLNDEPIQYILGKQTFYGEVFKVNKHCLIPRPETE----EVMLHFYNQ 106

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150
           +   D V  +D+GTG+G + ++L K  P  +    D+   AL +AK+NA  + V  RF  
Sbjct: 107 LHSGDCV--VDIGTGSGNIPISLKKLDPSLEVYATDLYTSALSVAKANAKMHQVEIRFLL 164

Query: 151 -DTLQS--DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            DTL    +    V GL    +SNPPYI+      +   V +++P  +L    +G   Y 
Sbjct: 165 GDTLMPLIEHGIKVNGL----ISNPPYIDDNDALIMDNTVLNYEPHTALFAKNNGYDIYD 220

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            I D +   L  +     EIG+NQ   +  RI E      V   KD   NDR++ F 
Sbjct: 221 KIIDQLREVLLPNAKVVFEIGFNQGQTLKQRIIEKYPSLDVQIIKDINNNDRIISFV 277


>gi|226363566|ref|YP_002781348.1| methyltransferase [Rhodococcus opacus B4]
 gi|226242055|dbj|BAH52403.1| putative methyltransferase [Rhodococcus opacus B4]
          Length = 260

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 7/207 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +    +  +LGW +F  +R+ +    F PR  T  LV+ A A + P      
Sbjct: 42  LASMLDRRVAGVPLEHVLGWAEFCGLRIEVDPRVFVPRRRTAFLVEQAAALACPH----- 96

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GAV  AL       +   VDI   A+  A+ N     +    D L +  
Sbjct: 97  -AVVVDLCCGSGAVGAALADTLDGIELYAVDIDPAAVRCARRNLAEPALVFEGD-LYAPL 154

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            S++ G  D++V+N PY+ +  +  +  E R  +PR+SLDGG DGL   R +  G    L
Sbjct: 155 PSALRGRIDILVANAPYVPTEAIRLMPPEARFHEPRVSLDGGADGLDIQRRVTAGARDWL 214

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
              G   +E   +Q       FE   L
Sbjct: 215 APGGHLLIETSESQAPRTAGAFEEAGL 241


>gi|125545368|gb|EAY91507.1| hypothetical protein OsI_13142 [Oryza sativa Indica Group]
          Length = 355

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 12/180 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     + +      PRPETE +VD      + +++  +     DLGTG+GA+ +A+ 
Sbjct: 147 WRDLV---VAVREGVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVA 198

Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172
           +   P  +    D+S  A+++A+ N    G+ ++ +     WF  +E   G    ++SNP
Sbjct: 199 RMLGPEGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNP 258

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +  +  L  EV   +P+++LDGG DGL H   + +G+S  L   G    E   N++
Sbjct: 259 PYIPTEDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQ 318


>gi|116811583|emb|CAL25958.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY+++     L  EV  
Sbjct: 185 AAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|302878941|ref|YP_003847505.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Gallionella capsiferriformans ES-2]
 gi|302581730|gb|ADL55741.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Gallionella capsiferriformans ES-2]
          Length = 302

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 7/147 (4%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P I + D + ++LDL TG+G  CLA+L    F       VD+S  AL +A+ N     ++
Sbjct: 128 PWITEPDSIGQVLDLCTGSG--CLAILCADAFPNATVDAVDLSPDALAVAERNVTDYELA 185

Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R   ++SD F+ + G  +D+I+SNPPY+++  V  L  E    +P++SL  G DGL   
Sbjct: 186 SRISLIESDLFAKLSGRRYDLIISNPPYVDAESVAALPAEYLH-EPKLSLGSGHDGLDAT 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKV 233
           R I    + HL ++G+  VEIG+N+ +
Sbjct: 245 RVILKHAAEHLTENGILIVEIGHNRDI 271


>gi|293606183|ref|ZP_06688547.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii
           ATCC 43553]
 gi|292815443|gb|EFF74560.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii
           ATCC 43553]
          Length = 316

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 119/243 (48%), Gaps = 24/243 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D VLD  +R          L +E+  R  G R + + R+ +      PR     L+D  L
Sbjct: 88  DRVLDLLERRVTERVPAAYLTNEAWLR--GHRFYVDKRVIV------PRSPIAELLDEGL 139

Query: 87  AFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVT 143
           A   P ++    V  +LD+ TG+G  CLA+L    F       VD+S  ALE+A+ N   
Sbjct: 140 A---PWVQDPYAVENVLDMCTGSG--CLAILGAMAFPNAHVDAVDVSADALEVARRNVDD 194

Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            G++ER D  +S+ F  +    +DVIV NPPY+ S  +D L  E R  +P+++L GG DG
Sbjct: 195 YGLAERLDLHESNLFDQLPACQYDVIVCNPPYVNSGSMDVLPQEYR-HEPQLALAGGDDG 253

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY-GGNDRVLL 261
           +   R I     ++L  +G+  +EIG+ +       FE+    L   + D    +D++LL
Sbjct: 254 MDLVRRILASAPKYLAPEGVIVLEIGHERD-----FFEAAFPQLSPVWLDTEEASDQILL 308

Query: 262 FCR 264
             R
Sbjct: 309 LTR 311


>gi|118465310|ref|YP_880756.1| modification methylase, HemK family protein [Mycobacterium avium
           104]
 gi|254774339|ref|ZP_05215855.1| modification methylase, HemK family protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118166597|gb|ABK67494.1| modification methylase, HemK family protein [Mycobacterium avium
           104]
          Length = 312

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 112/243 (46%), Gaps = 19/243 (7%)

Query: 34  QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           Q FF    +A++   +   +  +LG   F  V L +    F PRPETE L++ A A  LP
Sbjct: 56  QEFFQRYRDAVLARARRVPLQHLLGTAAFGPVLLHVGPGVFVPRPETEALLEWATAQQLP 115

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVS 147
               R V  I+DL TG+GA+ +AL           + VGVD S  ALE A+ NA    V 
Sbjct: 116 ---PRPV--IVDLCTGSGALAVALAHHRAGRGLPARIVGVDNSDAALEYARRNAAGTTVE 170

Query: 148 -ERFDTLQ----SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             R D ++          ++G  D++V+NPPY+    V  L  EV   DP  ++ GG DG
Sbjct: 171 LVRADVIELARVPGSAPDLDGRVDLVVANPPYVPDGAV--LEPEVAQHDPHHAVFGGPDG 228

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLL 261
           L+    + +   R L   GL  +E         V +F+   LF  V A +D  G  R + 
Sbjct: 229 LAVIAPVVELAGRWLRPGGLIGIEHDDTTSHQTVELFDRTGLFDDVRAHRDLTGRPRFVT 288

Query: 262 FCR 264
             R
Sbjct: 289 ARR 291


>gi|221066928|ref|ZP_03543033.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
 gi|220711951|gb|EED67319.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
          Length = 312

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 7/168 (4%)

Query: 98  VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V++LDL TG G++ CLA +   P  +  G DIS  AL +A+ N   +G+ +R   L+S+
Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S V G +D+++ NPPY+ S  +  L  E +  +P ++L GG DG+   R + + +   
Sbjct: 197 GMSQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGTDGMDFIRQLLEDLPAR 255

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           LNKD +  +EIG N+K      F    +F ++      G+++VLL   
Sbjct: 256 LNKDAVVVLEIG-NEKPYFEAAFPDLPVFWLDTSS---GDEQVLLITE 299


>gi|166710769|ref|ZP_02241976.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 281

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 9/222 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S  T  PR +TELLV+     +L R +     R 
Sbjct: 61  VQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTSPGRRA 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LA+  E P  + V    +  A          N      D    +WF+ +
Sbjct: 117 ADLGTGSGAIALAIASERPQAQ-VIATDASAAALALARRNAHNHALRNVDFRLGNWFAPL 175

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL   
Sbjct: 176 AGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPATALASGSDGLDDIRLIVADAPTHLLPG 234

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVLL 261
           G   +E G++Q  D VR   +   F   A ++D    DRV L
Sbjct: 235 GWLLLEHGWDQG-DAVRALLAASGFDAAATYQDLEARDRVTL 275


>gi|115489544|ref|NP_001067259.1| Os12g0612500 [Oryza sativa Japonica Group]
 gi|77556587|gb|ABA99383.1| modification methylase, HemK family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113649766|dbj|BAF30278.1| Os12g0612500 [Oryza sativa Japonica Group]
          Length = 353

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 12/180 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     + +      PRPETE +VD      + +++  +     DLGTG+GA+ +A+ 
Sbjct: 145 WRDLV---VAVREGVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVA 196

Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172
           +   P  +    D+S  A+++A+ N    G+ ++ +     WF  +E   G    ++SNP
Sbjct: 197 RMLGPEGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNP 256

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +  +  L  EV   +P+++LDGG DGL H   + +G+S  L   G    E   N++
Sbjct: 257 PYIPTEDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQ 316


>gi|326506000|dbj|BAJ91239.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 361

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 90/174 (51%), Gaps = 9/174 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCK 132
           PRPETE +VD   A     +E        DLGTG+GA+ +A+ +   P  +    D+S  
Sbjct: 167 PRPETEAVVDMVGA-----VEGFQDGWWADLGTGSGAIAVAVARMLGPAGRVFATDVSEV 221

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A+E+A+ N    GV ++ +  +  WF  +E   G    ++SNPPYI +  +  L  EV  
Sbjct: 222 AVEVARLNVHRYGVQDKVEIRRGSWFEPLEDVKGKLMGVISNPPYIPTDDLPGLQPEVGW 281

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            +P+++LDGG DGL H   + +G+S  L   G    E   N++ + +  F S K
Sbjct: 282 HEPKLALDGGKDGLDHLLHLCEGLSSALMPGGFFVFETNGNKQSEFLVDFISTK 335


>gi|253996070|ref|YP_003048134.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylotenera mobilis JLW8]
 gi|253982749|gb|ACT47607.1| modification methylase, HemK family [Methylotenera mobilis JLW8]
          Length = 303

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 90/156 (57%), Gaps = 6/156 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            ELLV+  LA   P IE  +++    D+ TG+G + + L    P      +DIS  A+++
Sbjct: 115 AELLVNDGLA---PWIEFPELINNAADICTGSGCLGVLLADAYPDAAVDVIDISQDAIDV 171

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
              N    G+ +R   ++SD FS ++G  +D+I+SNPPY+++  +  L  E R+ +P+++
Sbjct: 172 CNININAYGLQDRITAIKSDMFSQLKGKQYDLIISNPPYVDAPSMAVLPAEYRN-EPQLA 230

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           L  G+ GL H  TI    + +L +DG+  VEIG+N+
Sbjct: 231 LGSGVAGLDHTHTILHEAANYLTEDGVLVVEIGHNR 266


>gi|258626138|ref|ZP_05720986.1| Protein hemK [Vibrio mimicus VM603]
 gi|258581493|gb|EEW06394.1| Protein hemK [Vibrio mimicus VM603]
          Length = 177

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 15/156 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  PD  L+      L   + R +  E +  ILG R+F+++ L
Sbjct: 27  DAAVLLCHVLAKPRSYLLTWPDKTLEKPALVSLNALLTRRMAGEPVAYILGEREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFK 123
            +S  T  PRP+TE LV+ AL       EK  ++   +LDLGTGTGA+ LAL  E P  +
Sbjct: 87  KVSPSTLIPRPDTERLVELAL-------EKAALIEGELLDLGTGTGAIALALASELPLRR 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
             G+D+  +A E+A+ NA       R   L + +F+
Sbjct: 140 VTGIDLRPEAAELAQENAT------RLSILNTQFFA 169


>gi|195953186|ref|YP_002121476.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932798|gb|ACG57498.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 258

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%), Gaps = 29/264 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFY 61
           +LRD+   L  V+GL  + + ++ D++  ++       +I+  ++    +   +G   F+
Sbjct: 13  SLRDTLLVLEHVSGLDKNYIFLNQDNIELNQDVLEAFKSILSKIQSGMPLQYAIGKWWFF 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG----TGTGAVCLALLK 117
                +      PRPETE++V+ A+ F+          +   +G     G+G + + LLK
Sbjct: 73  GEEFIIEPPVLIPRPETEIVVEEAMKFA----------KQFKIGFEPFVGSGIISIVLLK 122

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
            +P  K V  DI+ KA E+A  NA  + V +R   + SD   +++    D +V+NPPYI 
Sbjct: 123 HNPHLKMVATDINKKACELALKNAKLHKVEDRLLVVCSDVAKAIKIEKVDFLVANPPYIP 182

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDV 235
           + +++ L   V +++   +LDG  +GL  Y+ +   G+   +       +EIG++Q+  +
Sbjct: 183 TNVLNTLEKSVLEYEDIKALDGKEEGLFFYKKLKSLGIKPMI-------LEIGHDQEQAL 235

Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259
             +F       V    DY  N RV
Sbjct: 236 KDLFGD-----VEIIYDYSNNPRV 254


>gi|311107250|ref|YP_003980103.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310761939|gb|ADP17388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Achromobacter xylosoxidans A8]
          Length = 298

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 10/162 (6%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130
           PR     L+D  LA   P ++    V  +LD+ TG+G  CLA+L     P+     VD+S
Sbjct: 109 PRSPIAELLDQGLA---PWVQDALAVENVLDMCTGSG--CLAILSALAFPYAHVDAVDVS 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A+ N    G+++R D   S+ F ++    +DVI+ NPPY+ S  +D L  E R 
Sbjct: 164 PDALEVARRNVDDYGLADRLDLHASNLFDNLPPRQYDVIICNPPYVNSGSMDALPQEYR- 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            +P+++L GG DG+   R I D   R L  +G+  +EIG+ +
Sbjct: 223 HEPQLALAGGDDGMDLVRRILDAAPRFLTPEGVLVLEIGHER 264


>gi|294789325|ref|ZP_06754563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Simonsiella muelleri ATCC 29453]
 gi|294482750|gb|EFG30439.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Simonsiella muelleri ATCC 29453]
          Length = 329

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  +++   LDL TG+G + + +    P  +   VDIS  ALE+A  N    G+ +R
Sbjct: 143 PWIEYDELIHHALDLCTGSGTLAIQMAHYYPDAQIDAVDISLDALEVASINIDDYGLRQR 202

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              + +D F  +E  +D+I+SNPPY++   V  L  E    +P ++L  G DGL   R I
Sbjct: 203 IQLIHADLFDGLENTYDLIISNPPYVDEESVKNLPDEYL-HEPTLALGSGKDGLDITRKI 261

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
            +  ++ LN +G+  VEIG+N+ V
Sbjct: 262 INQAAQFLNPNGVLLVEIGHNRDV 285


>gi|229816318|ref|ZP_04446625.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM
           13280]
 gi|229808074|gb|EEP43869.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM
           13280]
          Length = 389

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 9/171 (5%)

Query: 99  VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDT 152
            R+L++G GTG + L++  E S   + V +DI  +A++++  N    G+S      R   
Sbjct: 216 ARVLEVGCGTGCISLSIASERSGRAQCVAIDIEPRAVDLSIRNRDALGISPADVDVRLGN 275

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L S      E G FDV+VSNPPYI S +++ L  EV DF+P ++LDGG DGL  +R + +
Sbjct: 276 LVSPLNRETEWGTFDVLVSNPPYIPSAVMESLPHEVADFEPALALDGGADGLDIFRRLVN 335

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLL 261
                L   GL + E+ Y   +D    +  S  +  V    D+ G  R++L
Sbjct: 336 AAPHMLRPGGLLACEL-YEGHLDAAADLCRSAGMHDVRIVDDFTGRPRIVL 385



 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTGLS  ++ V+ D  +   +   +  A+VR  K E +  I+G   F  + +    
Sbjct: 34  LLSGVTGLSRTEIYVNFDKPMSSEELAAMHTAVVRRAKGEPLQYIIGETSFRTIDVMCEP 93

Query: 70  DTFEPRPETELLVDSALAF 88
               PRPETELLV+  LA+
Sbjct: 94  GVLIPRPETELLVEEVLAY 112


>gi|240169514|ref|ZP_04748173.1| modification methylase HemK [Mycobacterium kansasii ATCC 12478]
          Length = 282

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 11/217 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G   F  V L +    F PRPETE L++ A A  LP   +R V  I+DL TG+GA
Sbjct: 70  LQHLTGTVSFGPVELRVGPGVFIPRPETEALLEWATAQPLP---QRAV--IVDLCTGSGA 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           + +AL +  P  + +G+D S  ALE A+ NA  + V   R D         ++   D+++
Sbjct: 125 LAVALARHRPAARIIGLDDSEAALEYARRNAEGSNVELIRADVTTLGLRPDLDRRVDLVI 184

Query: 170 SNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+ ++  V+    EV   DPR ++ GG DG++    +     R L   GL +VE  
Sbjct: 185 ANPPYVPDNATVEP---EVAQHDPRHAVFGGPDGMAVIAHVVRLAGRWLRPGGLLAVEHD 241

Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
                  V    S  LF  + A KD  G  R +   R
Sbjct: 242 DTTSGLTVEFISSTGLFETIVARKDLAGRPRFVTAGR 278


>gi|237750574|ref|ZP_04581054.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879]
 gi|229373664|gb|EEO24055.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879]
          Length = 274

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 28/237 (11%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           D+QR+F   A+ ++     +  +     FY++ L + +    PR ETELLV+ AL     
Sbjct: 48  DKQRYFKILAMRKN--GVPLEYLTNKASFYDLELYVDNKVLIPRHETELLVEHALEI--- 102

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            I+  ++   +++G G+GA+  A+L  +     +  DIS +AL IAK N    G+  R D
Sbjct: 103 -IKAHNITHFVEVGVGSGAISAAILTHAKETCAIATDISKEALNIAKHNIQNLGLENRCD 161

Query: 152 TLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            ++SD  SS    +     ++V+NPPYI +     L  EV   +P I+L GG  G    +
Sbjct: 162 FVESDLLSSPYLIMRKPITLLVANPPYIANSY--PLNQEVL-CEPHIALFGGEKGDEILK 218

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA------FKDYGGNDR 258
            +         +  +C  E+GY+QK       ES +  L+N       +KDY G DR
Sbjct: 219 KLILQAREKQIQFLIC--EMGYDQK-------ESMQEILLNVGYKPTFYKDYAGFDR 266


>gi|223995553|ref|XP_002287450.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana
           CCMP1335]
 gi|220976566|gb|EED94893.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 294

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 13/202 (6%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR-LTLSSDTFEPRPETELLVDSALAF 88
           L D Q    ++ I R  K+E I  I+G  DF+ +  L++      PRPETE LV+  LA 
Sbjct: 39  LTDEQTTLYSSFIERRKKYEPIQYIIGKWDFHQLSGLSIRRPMLCPRPETEELVEILLAE 98

Query: 89  SLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKS 139
               I KR          +RILD+G GTGA+ +A+  + P    V  +D+  +A+E++  
Sbjct: 99  IEELIHKRGKKDKGSNGRIRILDVGAGTGAIGIAIAHQLPHHVQVLALDVLPEAVELSNE 158

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           NA    +S+  D+   D  SS +    FD++VSNPPYI S  +  L  ++ D++   +L 
Sbjct: 159 NA-QQFLSKLVDSDVGDVSSSQQYPMNFDLVVSNPPYIPSSDMPSLSTDILDYESVEALC 217

Query: 198 GGIDGLSHYRTIADGVSRHLNK 219
           GG DGL   R I   + + + +
Sbjct: 218 GGDDGLDVIRDIVQRLPKWMPR 239


>gi|302783851|ref|XP_002973698.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii]
 gi|300158736|gb|EFJ25358.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii]
          Length = 336

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 15/205 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +      PRPETE L+D A A      E    V + DLGTG+GA+ + + 
Sbjct: 127 WRDLV---LGVQEGVLIPRPETEQLIDLAAAAMDGNSELARGVWV-DLGTGSGAIAIGMA 182

Query: 117 KESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
           +      G G    VD S  A+ +A++NA    + +    ++  W + +    G    IV
Sbjct: 183 R---LLDGRGSVIAVDASEVAIAVAEANARRYKLQDAVTLVKGSWLTPLRDEAGKLSGIV 239

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-G 228
           SNPPYI S  +  L  EV   +P  +LDGG DG+ H   I  G    L   G  ++E  G
Sbjct: 240 SNPPYIPSRNLGRLQAEVGKHEPMCALDGGDDGIDHLAEICQGACWALKSGGFLALETDG 299

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDY 253
             Q   V +I   +    +   KD+
Sbjct: 300 GEQAQTVAKILSDKPFEDIKVVKDF 324


>gi|258422883|ref|ZP_05685783.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9635]
 gi|257846907|gb|EEV70921.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9635]
          Length = 278

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E +  I+G+  FY     ++++   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPVQYIVGFASFYGRTFEVNTNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 QKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|255326262|ref|ZP_05367348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia mucilaginosa ATCC 25296]
 gi|255296716|gb|EET76047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia mucilaginosa ATCC 25296]
          Length = 302

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100
           + R    E +  I G   FY + L +    F PRPETELLV+ AL    PR       +R
Sbjct: 72  VARRACREPLQHITGSAPFYRLELAVGPGVFVPRPETELLVEEALKVLAPRTNSATGQLR 131

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DL TG+GA+  A+  E P  +   V++S  A+   + N    GV      +Q D  ++
Sbjct: 132 IVDLCTGSGAIAAAIKSELPNAQVFAVELSEDAIPYTRKNLEPLGVH----LVQGDALTA 187

Query: 161 VE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
           +    G FD ++SNPPYI    V     E    DP ++L  GG DG+     IA
Sbjct: 188 LPELAGTFDAVLSNPPYIPPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIA 240


>gi|110834335|ref|YP_693194.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alcanivorax borkumensis SK2]
 gi|110647446|emb|CAL16922.1| site-specific DNA-methyltransferase [Alcanivorax borkumensis SK2]
          Length = 306

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 4/155 (2%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++ + A   P ++   V R+LDL TG+G + +A        +  G DI   A
Sbjct: 114 PRSPLAELIEQSFA---PWVDPEQVHRVLDLCTGSGCIAIACAYAFEHARVDGSDICADA 170

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L + K N   +G+ E+   LQSD  ++V+G +D+IVSNPPY+++  +  L  E R  +P 
Sbjct: 171 LAVCKENIERHGLGEQVRALQSDGLAAVDGPYDLIVSNPPYVDAQDMASLPDEYR-HEPE 229

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           ++L  G DGL   R +       L+++G+  VE+G
Sbjct: 230 LALASGNDGLDFTRRLLLDAPDQLSEEGVLIVEVG 264


>gi|125580052|gb|EAZ21198.1| hypothetical protein OsJ_36848 [Oryza sativa Japonica Group]
          Length = 335

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 9/177 (5%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP 120
           +VR    S    PRPETE +VD      + +++  +     DLGTG+GA+ +A+ +   P
Sbjct: 129 HVRDRRRSSVLIPRPETEAVVDM-----VAKVQGFEAGWWADLGTGSGAIAVAVARMLGP 183

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177
             +    D+S  A+++A+ N    G+ ++ +     WF  +E   G    ++SNPPYI +
Sbjct: 184 EGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNPPYIPT 243

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +  L  EV   +P+++LDGG DGL H   + +G+S  L   G    E   N++ +
Sbjct: 244 EDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQSE 300


>gi|91787869|ref|YP_548821.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polaromonas sp. JS666]
 gi|91697094|gb|ABE43923.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polaromonas sp. JS666]
          Length = 296

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 102/187 (54%), Gaps = 9/187 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            ELLVD+++    P +++ +  R+LDL TG G++ +      P       DIS  AL +A
Sbjct: 115 AELLVDASID---PWLDE-NTRRVLDLCTGNGSLAVLAAMTYPEVTVDAADISPDALAVA 170

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N   + + +R   ++SD  ++  G +D+I+ NPPY+ +  +  L  E R  +P ++L 
Sbjct: 171 RINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAASMAALPAEFRA-EPGLALA 229

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           GG DG+   R++    +RH++++ +  +EIG N++ +  R F   +      F+   G+D
Sbjct: 230 GGADGMDFIRSLFLNAARHMSENAVLVLEIG-NERGNFERAFPHLEPLW---FETSAGSD 285

Query: 258 RVLLFCR 264
           +V++  R
Sbjct: 286 QVMILTR 292


>gi|329912958|ref|ZP_08275852.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327545480|gb|EGF30683.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 292

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 6/169 (3%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +   V+ IL+L TG+G + + L    P      +DIS  AL +A+ N     + +R   +
Sbjct: 123 DAESVLNILELCTGSGCLAIMLADAFPNAHVDAIDISADALAVARRNVDDYELQDRITLI 182

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +S+ +++V +  +D+I+SNPPY+ S  +D L  E +  +PRI+L GG DG+   R I  G
Sbjct: 183 ESNLYAAVPDKKYDLIISNPPYVNSASMDKLPKEYQ-IEPRIALAGGTDGMDLVRNIVAG 241

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               L + GL  VEIG N++      F + +L  +       G+D V L
Sbjct: 242 ARERLTRGGLLVVEIG-NERAHAELAFPTLELTWMTT---SAGDDMVFL 286


>gi|221134758|ref|ZP_03561061.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Glaciecola sp. HTCC2999]
          Length = 311

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/129 (39%), Positives = 77/129 (59%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DL TG G + +AL  + P  +   +DIS  ALE+A  N   +G++ER   +QSD FS 
Sbjct: 142 IMDLCTGGGCIAIALAHQFPHAQVDALDISEDALEVASLNIDEHGLTERVYPVQSDVFSG 201

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V G  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   +TI +   +HL+ 
Sbjct: 202 VMGQTYDLIVSNPPYVDAEDMSDLPQEFL-HEPSLALAAGHDGLDIVQTILEQAPQHLSP 260

Query: 220 DGLCSVEIG 228
           +G   VE+G
Sbjct: 261 EGWLFVEVG 269


>gi|205375315|ref|ZP_03228105.1| HemK family modification methylase [Bacillus coahuilensis m4-4]
          Length = 285

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 20/266 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  +   S  +++ +   +LD+  R      +   +    I  I+G+ +FY     ++ 
Sbjct: 27  YLQHLLDWSRSKLLAEQQLLLDESIRELFVKGVKDHVSGIPIQHIIGYEEFYGRCYKVNR 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVGVD 128
               PRPETE LV   L       +       L D+GTG+GA+ +++  E P  +    D
Sbjct: 87  HVLIPRPETEELVYHTLEKISDLFKATGTALTLADIGTGSGAIAISMKLERPTLQVYASD 146

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL-FDVIVSNPPYIESVIVDCLGL 185
           +  +AL++AK NA   G    F   Q +    +   G+  DV++SNPPYI     + +  
Sbjct: 147 LHEEALQVAKENADRLGAEVHFT--QGNLLHPIMERGVKLDVMLSNPPYIPEGDKEWMSE 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE----- 240
            V + +P  +L  G DG+  YR   + +   +N  GL   E+G  Q   V  + +     
Sbjct: 205 VVTEHEPHSALFAGADGMVLYRQFMEELPLVMNSPGLIGFEVGTGQGEAVRDLLQQTFPS 264

Query: 241 --SRKLFLVNAFKDYGGNDRVLLFCR 264
             S+ +F +N      G DR ++FC 
Sbjct: 265 ARSKVVFDIN------GKDR-MVFCE 283


>gi|88855315|ref|ZP_01129979.1| methyltransferase [marine actinobacterium PHSC20C1]
 gi|88815222|gb|EAR25080.1| methyltransferase [marine actinobacterium PHSC20C1]
          Length = 290

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 13/223 (5%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----AFSLPRIEKRDV 98
            R    E +  I G   F N+ L +    F PRPETE +V  A+    A + P       
Sbjct: 70  ARRAAREPLQHITGVAPFRNLELRVGPGVFVPRPETETVVQFAIDALNASATPEPIG--- 126

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSD 156
              +DLGTG+GA+ L++  E P      V++S  A+     N    G   +   +    D
Sbjct: 127 ---VDLGTGSGAIALSMATEVPRSHIYAVELSPDAMPYTSENFRRYGADNATLINADLGD 183

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F+ ++G  DV++SNPPYI +  +    +EV+  DP ++L GG DG+   R ++    R 
Sbjct: 184 AFTELDGTVDVVISNPPYIPAAAI-PRDIEVQLHDPALALYGGEDGMDVVRRVSLTAKRL 242

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           L+  G   +E G  Q   +  +  +     V   KD  G DR 
Sbjct: 243 LHPGGTLVLEHGEEQAPALAALLTADGWNAVAHHKDLLGRDRA 285


>gi|312830469|emb|CBX35311.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|329726314|gb|EGG62782.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 277

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 58  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 169

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I   +   +
Sbjct: 170 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIGDLPHVM 229

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275


>gi|15925107|ref|NP_372641.1| protoporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927691|ref|NP_375224.1| hypothetical protein SA1919 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268568|ref|YP_001247511.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394632|ref|YP_001317307.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980432|ref|YP_001442691.1| hypothetical protein SAHV_2101 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315786|ref|ZP_04838999.1| hypothetical protein SauraC_06505 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006905|ref|ZP_05145506.2| hypothetical protein SauraM_10565 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793875|ref|ZP_05642854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9781]
 gi|258407043|ref|ZP_05680193.1| modification methylase [Staphylococcus aureus A9763]
 gi|258422065|ref|ZP_05684982.1| HemK family modification methylase [Staphylococcus aureus A9719]
 gi|258433566|ref|ZP_05688639.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|258440461|ref|ZP_05690631.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|258445669|ref|ZP_05693847.1| HemK family modification methylase [Staphylococcus aureus A6300]
 gi|258450123|ref|ZP_05698218.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|258453422|ref|ZP_05701404.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5937]
 gi|269203753|ref|YP_003283022.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894761|ref|ZP_06302987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A8117]
 gi|282929041|ref|ZP_06336626.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A10102]
 gi|295407047|ref|ZP_06816849.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8819]
 gi|296275404|ref|ZP_06857911.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246046|ref|ZP_06929903.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8796]
 gi|13701911|dbj|BAB43203.1| SA1919 [Staphylococcus aureus subsp. aureus N315]
 gi|14247890|dbj|BAB58279.1| similar to protoporphyrinogen oxidase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741637|gb|ABQ49935.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947084|gb|ABR53020.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722567|dbj|BAF78984.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787847|gb|EEV26187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9781]
 gi|257841376|gb|EEV65820.1| modification methylase [Staphylococcus aureus A9763]
 gi|257841965|gb|EEV66397.1| HemK family modification methylase [Staphylococcus aureus A9719]
 gi|257849297|gb|EEV73276.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|257852530|gb|EEV76448.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|257855508|gb|EEV78445.1| HemK family modification methylase [Staphylococcus aureus A6300]
 gi|257856597|gb|EEV79503.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|257864403|gb|EEV87149.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5937]
 gi|262076043|gb|ACY12016.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589347|gb|EFB94439.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A10102]
 gi|282762849|gb|EFC02983.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A8117]
 gi|285817781|gb|ADC38268.1| Methylase of polypeptide chain release factors [Staphylococcus
           aureus 04-02981]
 gi|294968072|gb|EFG44099.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8819]
 gi|297177045|gb|EFH36300.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8796]
 gi|315128788|gb|EFT84788.1| hypothetical protein CGSSa03_07701 [Staphylococcus aureus subsp.
           aureus CGS03]
          Length = 278

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I   +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIGDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|312879995|ref|ZP_07739795.1| modification methylase, HemK family [Aminomonas paucivorans DSM
           12260]
 gi|310783286|gb|EFQ23684.1| modification methylase, HemK family [Aminomonas paucivorans DSM
           12260]
          Length = 291

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 115/268 (42%), Gaps = 13/268 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L ++  FL + TG +  + +V P+  + +  R      + R L  E +  ILG   F 
Sbjct: 21  RPLWEAELFLEKATGWTRREQLVFPEREVFETPRDTAEALVRRRLAGEPLDYILGEAPFG 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPE+E+LV  A+   LPR         LD G G+G +  ++  E P 
Sbjct: 81  AWAFAVGPGCLIPRPESEVLVREAVG-RLPRGGN-----FLDWGAGSGCLACSVALERPD 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176
            +G  ++ S  AL  A  N   +G+ +R         S +E       F  +++NPPYI 
Sbjct: 135 LRGCALEASPAALRWAWENLRRHGLRDRVLLWHGR--SPMELPPWTAPFHGVLANPPYIP 192

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +     L   VRD +PR +LDGG  GL    +    +   L   G    E     ++D++
Sbjct: 193 TEHWIALDPSVRDQEPRCALDGGDRGLEPLLSWLALLPPFLEPGGWILAETAGPWQIDLL 252

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      L L    +D  G  R +L+ R
Sbjct: 253 QEHRPEGLCLEEVLEDPFGVPRFVLWRR 280


>gi|255566573|ref|XP_002524271.1| n6-DNA-methyltransferase, putative [Ricinus communis]
 gi|223536462|gb|EEF38110.1| n6-DNA-methyltransferase, putative [Ricinus communis]
          Length = 354

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 12/212 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRDF    L++      PRPETEL++D      L   E  + +   DLGTG+GA+ + + 
Sbjct: 142 WRDFV---LSVQEGVLIPRPETELIIDLVKGAVLNNEELSEGLWA-DLGTGSGALAIGIA 197

Query: 117 K-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
           K   P  + +  D+S  A  +A  N     +    +  +  WF   + VEG    +VSNP
Sbjct: 198 KILGPQGRVIATDLSPVAASVATYNVQRYDLQGMVEVRKGSWFEPLNDVEGKLAGVVSNP 257

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           PYI S  +  L  EV   +PRI+LDGGI G+     + +G +  L   G  + E  G  Q
Sbjct: 258 PYIPSDDISGLQAEVGRHEPRIALDGGISGMDDLLHLTNGAASILKPGGFFAFETNGEKQ 317

Query: 232 KVDVVRIFE---SRKLFLVNAFKDYGGNDRVL 260
              ++   E   S   F VN   D  G  R L
Sbjct: 318 CKFLLHHMENECSGCFFNVNIVSDCAGIQRFL 349


>gi|219126337|ref|XP_002183416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405172|gb|EEC45116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 424

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD----SALAFSLPRIEKRD 97
           +VR    E I  + G  DF +  LT+      PRPETE LV+         +      R 
Sbjct: 184 LVRRKTMEPIQYLTGQWDFLDYVLTVRHPLLCPRPETEELVELVREDLATLAAKNNSDRC 243

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDT-- 152
            +RILD+G GTG + ++L  + P      +D+   A+  A  NA   +      RF+   
Sbjct: 244 RLRILDVGCGTGCIGVSLAAKLPNSFVEAIDVEHVAVATATENAERVLGAQYQARFNAQL 303

Query: 153 LQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +++ F  ++V+  FD +VSNPPYI    +  L   V DF+   +L GG DGL   R+I 
Sbjct: 304 CEAEVFDVATVQDRFDAVVSNPPYIPRADMGTLETTVVDFESETALCGGEDGLDVVRSIV 363

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDR 258
             +     ++ +C +E+       + +  ES     +  V+ ++D  GNDR
Sbjct: 364 KKLPFWCVENAVCWMEVDPTHPALLRKWLESDCSLGVVFVHTYRDLYGNDR 414


>gi|82751718|ref|YP_417459.1| hypothetical protein SAB2001c [Staphylococcus aureus RF122]
 gi|82657249|emb|CAI81690.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|298695391|gb|ADI98613.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323439334|gb|EGA97058.1| HemK family modification methylase [Staphylococcus aureus O11]
 gi|323442457|gb|EGB00086.1| HemK family modification methylase [Staphylococcus aureus O46]
          Length = 278

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 114/226 (50%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F  L  D    
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQF--LTGDALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  EG+  + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 171 LIKEGIKLNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLF 262
            K      EIGYNQ   +  I  S+     ++  KD  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQGEALKSIILSKFPDKKIDIIKDINGHDRIVSF 276


>gi|223966753|emb|CAR93113.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 114/248 (45%), Gaps = 29/248 (11%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE- 79
           Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPETE 
Sbjct: 79  QLQLNPGQ-LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPETEE 132

Query: 80  ---LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L++D          +    V +L++G G+GA+ L++L   P      ++ S  A  +
Sbjct: 133 FMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAATVL 184

Query: 137 AKSNAVTNGVSERFD----TLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A  NA   G+  RF+    T++ D +      +  +D+I+SNPPY++      L  EV  
Sbjct: 185 AAENAKMLGLLHRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKIEEFQFLHPEVVV 244

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLF 245
           ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F
Sbjct: 245 YENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKF 304

Query: 246 LVNAFKDY 253
           +      Y
Sbjct: 305 IAGYSDQY 312


>gi|41408559|ref|NP_961395.1| hypothetical protein MAP2461c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396917|gb|AAS04778.1| HemK [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 300

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 109/237 (45%), Gaps = 19/237 (8%)

Query: 34  QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           Q FF    +A+    +   +  +LG   F  V L +    F PRPETE L++ A A  LP
Sbjct: 59  QEFFQRYRDAVSARARRVPLQHLLGTAAFGPVLLHVGPGVFVPRPETEALLEWATAQQLP 118

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVS 147
               R V  I+DL TG+GA+ +AL           + VGVD S  ALE A+ NA    V 
Sbjct: 119 ---PRPV--IVDLCTGSGALAVALAHHCAGRGLPARIVGVDNSDAALEYARRNAAGTTVE 173

Query: 148 -ERFDTLQ----SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             R D ++          ++G  D++V+NPPY+    V  L  EV   DP  ++ GG DG
Sbjct: 174 LVRADVIELARVPGSAPDLDGRVDLVVANPPYVPDGAV--LEPEVAQHDPHHAVFGGPDG 231

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
           L+    I +   R L   GL  +E         V +F+   LF  V A +D  G  R
Sbjct: 232 LAVIAPIVELAGRWLRPGGLIGIEHDDTTSHQTVELFDRTGLFDDVRARRDLTGRPR 288


>gi|328950556|ref|YP_004367891.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinithermus hydrothermalis DSM 14884]
 gi|328450880|gb|AEB11781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinithermus hydrothermalis DSM 14884]
          Length = 276

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 9/222 (4%)

Query: 40  NAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
            AI+R  +  + +  ILG  +F+ + L ++     PRPETE LV+ AL      +  +  
Sbjct: 58  EAILRERVTRKPLQLILGTAEFFGLVLKVAPGVLIPRPETEGLVELALEL----LRDQPA 113

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+GTG+GA+ LAL    P       D +  A+ +A+ NA   G++   + ++  + 
Sbjct: 114 PRVLDVGTGSGAIALALKHARPDAAVWATDTNPAAVALARQNAARLGLT--IEVVEGAFT 171

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           + + G F +IVSNPPY+          E+  ++P  +L  G +GL   R +A      L 
Sbjct: 172 AGLTG-FHLIVSNPPYLPEAYRREAPPEL-AWEPPSALYAGPEGLDVLRPLARVAQAALE 229

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             G  ++E+       +    E+     V+  KD  G  R L
Sbjct: 230 PGGWLALELSPTHAHTMAEELEALGFSSVSVRKDLAGRARYL 271


>gi|239637410|ref|ZP_04678392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus warneri L37603]
 gi|239597010|gb|EEQ79525.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus warneri L37603]
          Length = 278

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 108/224 (48%), Gaps = 18/224 (8%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  I+G++ FY  R T+S     PRPETE   +  L F L    + D   I D
Sbjct: 62  RMLSGEPIQYIVGFQSFYGYRFTVSDRCLIPRPETE---EVMLHF-LNLCNEGDA--IAD 115

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VE 162
           +GTG+G + + L K  P    +  D+   ALE+A+ NA  +G  E  D +Q +     +E
Sbjct: 116 IGTGSGVLGITLKKLKPTLSVIATDLYEDALEVARLNAEQHG--ENIDFIQGNALKPLIE 173

Query: 163 GLFDV--IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               V  ++SNPPYI+   V  +   V D++P  +L     G + Y++I + + + L   
Sbjct: 174 RNIKVNGLISNPPYIDVKEVKDMAKTVVDYEPHQALFAKSQGYAIYQSILNDLPKVLLPG 233

Query: 221 GLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                EIGYNQ    K  V  ++  +    V  +KD    DR+L
Sbjct: 234 AHVVFEIGYNQGQTLKEIVNDMYPDKA---VAIYKDINQLDRIL 274


>gi|150021299|ref|YP_001306653.1| HemK family modification methylase [Thermosipho melanesiensis
           BI429]
 gi|149793820|gb|ABR31268.1| modification methylase, HemK family [Thermosipho melanesiensis
           BI429]
          Length = 261

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 24/259 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +++  L  +TG      I  P+  L +     L + I   LK   +  I   + F+    
Sbjct: 19  EAYIVLKYLTGKPKEFFIAHPEYELKE---VGLIDLINLRLKRYPLSYITREKGFFKRNF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE+LV+     ++  I+K  + +I ++G G+GA+ +++L  +    G 
Sbjct: 76  YVEEGVLIPRPETEMLVE----ITIDLIKKNKIRKIAEVGVGSGAIIISILLNTDC-TGY 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDC 182
             DIS KA++++K NA   GV  R   ++  +       +D   +IVSNPPY+   +   
Sbjct: 131 ATDISEKAIKVSKINAKRYGVEGRLKIVKGSYLEPFLRKWDEIELIVSNPPYVR--LDAT 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L LEV  ++P+ +L GG DGL  YR     +  +     +  +EIG++Q       +  R
Sbjct: 189 LDLEV-GYEPKEALYGGKDGLDFYRNF---LKMYDFSGKIVVMEIGHDQGE-----WFKR 239

Query: 243 KLFLVNAFKDYGGNDRVLL 261
           K + V   KDY G DR+++
Sbjct: 240 KGWEV--IKDYSGQDRIVI 256


>gi|237797646|ref|ZP_04586107.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020496|gb|EGI00553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 302

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81
           DS LD R      + + R +K     RI     LG   F  +   +      PR     L
Sbjct: 54  DSYLDCRLEVDEISELQRLIKRRIDDRIPTPYLLGEAWFCGMSFIVDERVLIPRSPIAEL 113

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++   A  L      +  RILDL TG+G + +A   E P  +    D+S  ALE+A  N 
Sbjct: 114 IEERFAPWL----ASEPARILDLCTGSGCIGIACADEFPEAEVALADLSYDALEVANQNI 169

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +G+ +R  T+Q D F  + G  FD+IVSNPPY++S     +  E +  +P ++L  G 
Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDSEDFADMPDEYQ-HEPELALACGN 228

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           DGL+  R +    + HLN+ GL  VE+G N +V V  ++
Sbjct: 229 DGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQVHVQALY 266


>gi|283458331|ref|YP_003362952.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
 gi|283134367|dbj|BAI65132.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
          Length = 308

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 97/207 (46%), Gaps = 12/207 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL------AFSLPRIEK 95
           + R +  E +  I G   FY + L +    F PRPETELLV+ AL      A S PR + 
Sbjct: 72  VARRVCREPLQHITGSAPFYRLELAVGPGVFVPRPETELLVEEALKVLSTRADSAPRADS 131

Query: 96  RD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
               +RI+DL TG+GA+  A+  E P  +   V++S  A+   + N    GV   + D L
Sbjct: 132 ATGGLRIVDLCTGSGAIAAAVKSELPDAQVFAVELSEDAIPYTRRNLEPLGVHLVQGDAL 191

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADG 212
            S   S + G FD ++SNPPYI    V     E    DP ++L  GG DG+     IA  
Sbjct: 192 TS--LSELAGTFDAVLSNPPYIPPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIAAR 248

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               L   GL  +E    Q+  V  + 
Sbjct: 249 AFELLTPGGLFIMEHDDTQEEAVAELL 275


>gi|224477105|ref|YP_002634711.1| hypothetical protein Sca_1620 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421712|emb|CAL28526.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 274

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 14/236 (5%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D+ +RF   +A+ R L  E I  I G++ F   + T+      PRPETE      L   +
Sbjct: 44  DELKRF--NDAVDRMLSGEPIQYITGFQTFLGEKFTVDYRCLIPRPETE----EVLMHFI 97

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R ++ DVV   D+GTG+G + + L +  P  K    D+    L+IA+ NA  +     F
Sbjct: 98  ERCQQGDVVA--DIGTGSGIIAVMLKQLRPDLKVYATDLYDGPLQIAQQNADAHHTEITF 155

Query: 151 ---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + L+    +++    D ++SNPPYI+      +   V D++P  +L     GL+ Y 
Sbjct: 156 LKGNALEPLVENNIR--LDGLISNPPYIDFADASEMTETVLDYEPHQALFAENHGLAIYA 213

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262
            I + +   +    +   EIG+ Q   + R+ E +   + V    D  GNDR++ F
Sbjct: 214 AIIEQLPFVMQNGAIVVFEIGFEQGPTLKRMIEEKYPHIEVEVIADINGNDRIVSF 269


>gi|33239811|ref|NP_874753.1| methylase of polypeptide chain release factor [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
 gi|33237337|gb|AAP99405.1| Methylase of polypeptide chain release factor [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 293

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 8/211 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRDF    L ++S    PR ETE+L+D AL      + K    R  DLGTG+GA+ +AL 
Sbjct: 87  WRDF---ELKVNSSALIPRQETEILIDIALKKVDAGLMKYG--RWADLGTGSGALAVALA 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
           +  P ++G   D    AL +A+SN  T   +        DW+  ++   G FD++V+NPP
Sbjct: 142 RALPLWEGHAADCCNDALALAESNINTLTENANVSLHLGDWWEPLKPWWGNFDLVVANPP 201

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI    +  L   VRD +P ++L GG DG+   R +  G  + L   G   +E  ++Q  
Sbjct: 202 YIPKTHLSELDPVVRDHEPILALSGGDDGMDSCRKVIKGAMKGLRSGGWLLLEHNFDQSE 261

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             + +        V+   D  G  R  L  R
Sbjct: 262 QALNLMVDSGFLEVDFENDLEGVRRFGLALR 292


>gi|299821848|ref|ZP_07053736.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601]
 gi|299817513|gb|EFI84749.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601]
          Length = 285

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 10/222 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  IL    F+     + +    PRPETE LV  AL  +    +K    ++LD
Sbjct: 64  RYLAGEPIQYILKTAPFFGYDFYVDNHVLIPRPETEELVYKALETA----KKTGFRKVLD 119

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE 162
           + TG+G + + + KE P       DIS +AL+++K NA   G   R  +T  +D+F    
Sbjct: 120 ICTGSGVIGITMKKELPELTITLSDISPEALQVSKKNAQQLGAEVRCIETDVADYFVDNC 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             + +I++NPPYI     + LG+   V   +P ++L    +GL+ Y  +   +   +  +
Sbjct: 180 EKYQLIIANPPYIAE--HERLGMSDLVLKNEPELALFAENNGLAIYEKLVKQLPAIVEAN 237

Query: 221 GLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLL 261
               VEIGY Q   V  +F+ S     V   KD  G DR+++
Sbjct: 238 FWIGVEIGYQQGESVRALFQKSFPQVPVVIHKDINGKDRMVI 279


>gi|254426996|ref|ZP_05040703.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
 gi|196193165|gb|EDX88124.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
          Length = 309

 Score = 85.5 bits (210), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P ++   V R+LDL TG+G + +A        +  G DIS +AL + + N   +G++E+ 
Sbjct: 128 PWVDPERVHRVLDLCTGSGCIAIACAYAFEHAQVDGSDISAEALAVCEENIQRHGLAEQV 187

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             LQSD  ++V+G +D+IVSNPPY+++  +  L  E R  +P ++L  G DGL   R + 
Sbjct: 188 RALQSDGLAAVDGPYDLIVSNPPYVDAQDMASLPDEYR-HEPELALASGDDGLDFTRKLL 246

Query: 211 DGVSRHLNKDGLCSVEIG 228
                 L ++G+  VE+G
Sbjct: 247 LDAPDQLTEEGVLIVEVG 264


>gi|229551968|ref|ZP_04440693.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
 gi|258539382|ref|YP_003173881.1| modification methylase HemK [Lactobacillus rhamnosus Lc 705]
 gi|229314703|gb|EEN80676.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
 gi|257151058|emb|CAR90030.1| Modification methylase HemK protein [Lactobacillus rhamnosus Lc
           705]
          Length = 276

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 14/253 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           + R     S  ++   D + D   R F   A V  L H E    I G   F+     ++ 
Sbjct: 31  MTRADWTPSQLILHRQDPMPDAAWRQF--QADVARLAHFEPAQYITGQAPFFGTMFAVTP 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P       D+
Sbjct: 89  AVLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTLSDV 142

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S  AL +AK NA     S  F T  SD F+ + G FD +V+N PYI       +      
Sbjct: 143 SPSALAVAKQNAAAQKASVHFVT--SDLFNHLPGRFDFVVTNLPYIAPEEASVMDQSTLR 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F + KL    A
Sbjct: 201 YEPKLALFADHHGLALFERFVTELPQHLNPHGAVYLEFGYHQEPALRQLF-AEKLPQAQA 259

Query: 250 F--KDYGGNDRVL 260
              +D  G+ R++
Sbjct: 260 TFRRDMAGHPRMV 272


>gi|330684796|gb|EGG96489.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU121]
          Length = 278

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 11/191 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E I  I+G++ FY  R T+S     PRPETE ++   L          D   I D
Sbjct: 62  RMLSGEPIQYIVGFQSFYGYRFTVSDRCLIPRPETEEVMLHFLNLC------NDGDAIAD 115

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           +GTG+G + + L K  P    +  D+   AL++A+ NA  +G  E  D +Q +    +  
Sbjct: 116 IGTGSGVLGITLKKLKPTLSVIATDLYEDALDVARLNAEQHG--ENIDFIQGNALKPLIE 173

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                + ++SNPPYI+   V  +   V D++P  +L    +G + Y++I + + + L   
Sbjct: 174 RNIKLNGLISNPPYIDVKEVKDMAKTVVDYEPHQALFAKSEGYAIYQSILNDLPKVLLPG 233

Query: 221 GLCSVEIGYNQ 231
                EIGYNQ
Sbjct: 234 AHVMFEIGYNQ 244


>gi|209965995|ref|YP_002298910.1| modification methylase,hemK family [Rhodospirillum centenum SW]
 gi|209959461|gb|ACJ00098.1| modification methylase,hemK family [Rhodospirillum centenum SW]
          Length = 338

 Score = 85.5 bits (210), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 6/140 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +V R+LDL TG+G  CLA+L    F       VD+S +ALE+A+ N    G+ ER   +Q
Sbjct: 169 EVGRVLDLCTGSG--CLAILAAGIFPDATVDAVDLSPEALEVARINVAEAGLEERVSLIQ 226

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D F  ++G  +DVI++NPPY+ +  +  L  E R  +P+++L  G DGL   R I    
Sbjct: 227 GDLFKPLKGRRYDVILTNPPYVSAEAMAELPPEYR-HEPQMALGSGEDGLDIVRRILAEA 285

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
            RHL ++G    EIG  + +
Sbjct: 286 HRHLTEEGGLLCEIGTGRTI 305


>gi|21283770|ref|NP_646858.1| hypothetical protein MW2041 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486910|ref|YP_044131.1| hypothetical protein SAS2020 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297210062|ref|ZP_06926455.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300910425|ref|ZP_07127877.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|21205212|dbj|BAB95906.1| MW2041 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245353|emb|CAG43828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296885262|gb|EFH24202.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300888267|gb|EFK83458.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 278

 Score = 85.1 bits (209), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE      +   L ++E  D   
Sbjct: 59  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE----EVMLHFLQQLE--DDAT 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F   D L+   
Sbjct: 113 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQFLTGDALKPLI 172

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              ++   + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 173 NEDIK--LNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 231 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 276


>gi|329729336|gb|EGG65744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 277

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 26/233 (11%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G+  FY     ++S+   PRPETE   +  L F L ++E  D   
Sbjct: 58  ALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLIPRPETE---EVMLHF-LQQLE--DDAT 111

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           I+D+GTG+G + + L  E P    +  DIS +A+ +A++NA  +    +F   D L+   
Sbjct: 112 IVDIGTGSGVLAITLKCEKPDLNVIATDISLEAMNMARNNAEKHQSQIQFLTGDALKPLI 171

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              ++   + ++SNPPYI+   +  +   V  F+P  +L     G + Y +I + +   +
Sbjct: 172 NEDIK--LNGLISNPPYIDEKDMVTMSPTVTRFEPHQALFADNHGYAIYESIIEDLPHVM 229

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK--------DYGGNDRVLLF 262
            K      EIGYNQ        E+ K  ++N F         D  G+DR++ F
Sbjct: 230 EKGSPVVFEIGYNQG-------EALKSIILNKFPDKKIDIIKDINGHDRIVSF 275


>gi|206900454|ref|YP_002250521.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12]
 gi|206739557|gb|ACI18615.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12]
          Length = 274

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 113/218 (51%), Gaps = 18/218 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           ++ I+  ++FYN    +      PR ETE+L++ A       I +    R+ ++G G+G 
Sbjct: 62  LNYIIKKKEFYNTEFFIEKGVLIPRNETEILIEVAKD----SILREGYYRVAEVGVGSGN 117

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-----FSSVEGLF 165
           + + L KE    K    DIS KA++IA+ NA  N VS++ +     +     + +++  F
Sbjct: 118 ISITLAKEFENIKIYACDISPKAIKIARFNAEINKVSDKIEFFYGPFIYPLIYRNID--F 175

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++++SNPPY+ S     L  EV+  +P  +L GG DG   YRT+   + +   K  +  +
Sbjct: 176 EILLSNPPYVASYEFPFLQKEVKR-EPWEALYGGWDGCEFYRTLFK-ILKDKGKKFVAIL 233

Query: 226 EIG---YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           EI    Y + +++V+ F +    +V +F+D  G  RVL
Sbjct: 234 EISPFIYKKVLNIVKRFFNN--VIVESFEDSLGYKRVL 269


>gi|319778151|ref|YP_004134581.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171870|gb|ADV15407.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 241

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 9/209 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +V L L+     PR ETELL   ALA    R     V+   D+  G+G + LA+  E 
Sbjct: 19  FMSVMLELAPGVLVPRQETELLGQRALAILGDRAPGPMVI---DMCCGSGNLALAIAAEV 75

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPY 174
           P  +  GVD++   + +A+SNA    + +R    + D F ++EG       D+IV NPPY
Sbjct: 76  PSARVWGVDVTDSTVALARSNAERLALQDRVTIRKGDLFGALEGDGLIGAADMIVCNPPY 135

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++     + + +PR + DGG  G+S  + +    +  L  DG    E G  Q   
Sbjct: 136 ISTARLEGESAHLLEGEPREAFDGGPYGISIQQRLIRDATDFLKPDGWLLFEFGQGQDRQ 195

Query: 235 VVRIFESRKLFLVNAF-KDYGGNDRVLLF 262
           V  +    K +    F KD  G  RV L 
Sbjct: 196 VAALIARAKAYEPVTFAKDEVGMPRVALL 224


>gi|329956197|ref|ZP_08296877.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT
           12056]
 gi|328524671|gb|EGF51732.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT
           12056]
          Length = 282

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 113/259 (43%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G ++    +  D +L  ++   L   + R    E I  I G   F      ++   
Sbjct: 34  CEILGQTAVDYYLGKDIILSPKEMQDLDGILARLHNFEPIQYIQGTARFLERSYHVAPGV 93

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LV++ L       E     R+LD+GTG+G + ++L K  P  K    DIS 
Sbjct: 94  LIPRPETEELVETMLK------EIASDARVLDIGTGSGCIAVSLSKAFPDAKVTAWDISD 147

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL IA+ N    G + RF  L+ +  +   G    +DVIVSNPPY+       +   V 
Sbjct: 148 EALNIARRNNDMLGGNVRF--LRQNVLTYTPGDSECYDVIVSNPPYVTESEKQTMERNVL 205

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++P  +L   D   D L  YR IA+     L   G    EI          +   +   
Sbjct: 206 DWEPFSALFVPDN--DPLLFYRRIAELGKTMLAPGGRLYFEINRAYGEATATMLCEQGYT 263

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR+++  R
Sbjct: 264 NLQVLKDISGNDRIVIAER 282


>gi|291320736|ref|YP_003516001.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae]
 gi|290753072|emb|CBH41048.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae]
          Length = 240

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 7/179 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I+G+ ++ NVR+ L+     PR ETE LV   L   L     +  +++LDL  G+G 
Sbjct: 34  IQYIMGYVEYANVRINLNHKVLIPRYETEELVYILLNEYL-----KPGMKVLDLCAGSGF 88

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDVIV 169
           + +AL K       +  DI  +A+  A  N V N   +     +QSD F+ ++G FD+IV
Sbjct: 89  IGIALKKNLDSINVILSDIDNEAIMQANENVVLNFKNTTGIQIVQSDCFNDIKGKFDLIV 148

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           SNPPY++    D +   V+ F+P I+L     G   Y  I +    +LN+ G+ + EI 
Sbjct: 149 SNPPYLDYDDKD-VDESVKKFEPEIALFAKDSGWYFYEKILNEAKHYLNEGGILAFEIN 206


>gi|220935549|ref|YP_002514448.1| Methylase of polypeptide chain release factors-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996859|gb|ACL73461.1| Methylase of polypeptide chain release factors-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 296

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 9/237 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD      L   + + L    +  + G +DF  + L  S     PR ETE+L  +A+   
Sbjct: 57  LDQAAEGLLNTLVDKRLAGTPLSHLTGRQDFMGLVLKSSEAALVPRRETEILGRAAIG-K 115

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E  +  R++DL TG G + LA+   +P  +  G D+S +A+ +A+ NA   G  + 
Sbjct: 116 LADVEG-ESPRVVDLCTGCGNLALAMAVSAPRARVWGSDLSEEAVALARENAAFIGRPD- 173

Query: 150 FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              +  D  +  +     G  D++  NPPYI S  V+ L  E+   +P ++ DGG  G+ 
Sbjct: 174 VSFMAGDLAAPFDNDDFLGRMDLLTCNPPYISSAKVEQLPEEISGHEPHMAFDGGPFGIK 233

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
             + + +   R L   G    E+G  Q   +    E    F  V  F DY G+ R L
Sbjct: 234 IIQRLINDAPRLLKPGGWLLFEVGLGQGEPMKHRLERNDAFDQVETFADYQGDVRAL 290


>gi|299531024|ref|ZP_07044437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Comamonas testosteroni S44]
 gi|298720981|gb|EFI61925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Comamonas testosteroni S44]
          Length = 315

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 92/168 (54%), Gaps = 7/168 (4%)

Query: 98  VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V++LDL TG G++ CLA +   P  +  G DIS  AL +A+ N   +G+ +R   L+S+
Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S V G +D+++ NPPY+ S  +  L  E +  +P ++L GG DG+   R + + +   
Sbjct: 197 GISQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGADGMDFIRRLLEDLPAR 255

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           LNKD +  +EIG N+K      F    +F ++      G+++VLL   
Sbjct: 256 LNKDAVVVLEIG-NEKPYFDAAFPDLPVFWLDTSS---GDEQVLLITE 299


>gi|330811121|ref|YP_004355583.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379229|gb|AEA70579.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 302

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 79/137 (57%), Gaps = 2/137 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  RILDL TG+G + +A   E P  + V  D+S +ALE+A  N   +GV ER  T+Q 
Sbjct: 124 QEPARILDLCTGSGCIGIACAYEFPEAEVVLADLSFEALEVANQNIERHGVDERVFTVQG 183

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL+  R +    +
Sbjct: 184 DGFDGLPGQRFDLIVSNPPYVDAEDFADMPQEYQ-HEPELGLACGDDGLNLVRRMLAEAA 242

Query: 215 RHLNKDGLCSVEIGYNQ 231
            HL + GL  VE+G +Q
Sbjct: 243 DHLTEKGLLIVEVGNSQ 259


>gi|224541462|ref|ZP_03682001.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525620|gb|EEF94725.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM
           15897]
          Length = 277

 Score = 85.1 bits (209), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 21/255 (8%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +TG + +Q+++  +  +++       + + R LK E    I+G   FY     ++     
Sbjct: 29  LTGDAYYQLLLKREEPVEEALLMQYKDYLNRYLKGEPYQYIIGKEYFYGREFDVNPSVLI 88

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR ETE LV+  L++  P +       + D+GTG+GA+ + L  ES       VDIS +A
Sbjct: 89  PRYETEELVEKVLSYIKPGM------VVADIGTGSGAIAVTLACESK-ADLYAVDISKEA 141

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           ++ A  NA  +  S  F   D LQ     ++    D++VSNPPYI+    + L   V D 
Sbjct: 142 IDTASKNAKKHEASVTFLEGDLLQPLIDQNIR--VDILVSNPPYID--YDEVLDPRVIDH 197

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN-- 248
           +P ++L     G + Y  I       L +  + + EIGYNQ     R+ +   L+  N  
Sbjct: 198 EPHLALFADDHGYACYEKIFKEAPSVLKEKAILAFEIGYNQG---ERMKQLVPLYFPNDT 254

Query: 249 --AFKDYGGNDRVLL 261
               KD  G DR+L 
Sbjct: 255 FEVIKDMNGKDRMLF 269


>gi|183984068|ref|YP_001852359.1| modification methylase HemK [Mycobacterium marinum M]
 gi|183177394|gb|ACC42504.1| modification methylase HemK [Mycobacterium marinum M]
          Length = 282

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 9/211 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE +++ A A  L      +   I+DL TG+G
Sbjct: 69  PLQHLIGTVQFGPVELQVGPGVFVPRPETEAVLEWAGAQQL-----SEYPVIVDLCTGSG 123

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVI 168
           A+ +AL    P  + +GVD S  ALE A+ N+V   V   R D         ++G  D++
Sbjct: 124 ALAIALADRWPAARILGVDDSGAALEYAQRNSVGTKVELVRADVTTPGLMPELDGQVDLV 183

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPPYI    V  L  EV   DP  +L GG +G++    +     R L   G  +VE  
Sbjct: 184 VTNPPYIPDGAV--LEPEVAQHDPHRALFGGPNGMAVIPHVVRLAGRWLRPGGRFAVEHD 241

Query: 229 YNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
                  V   ES  +F  + A +D  G  R
Sbjct: 242 DTTARQTVECIESEGVFEDIVARQDLAGRPR 272


>gi|323466866|gb|ADX70553.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus helveticus H10]
          Length = 280

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 19/258 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D VL D Q       I +  K  S   ILG+  F   ++ +   
Sbjct: 28  LAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFLGYKIMVQRG 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+    ++L  ++  D  ++LDLGTG+G + +AL KE+   KG+     
Sbjct: 88  VLIPRFETEELVE----WTLKSLKSGD--KVLDLGTGSGCITVALAKEAEK-KGIKDLTL 140

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++     + 
Sbjct: 141 YASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLEK-FDKIISNPPYIKTTEKKEMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F +++L
Sbjct: 198 ENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELF-AKEL 256

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +   KD  G  R++
Sbjct: 257 PDFDIEFRKDVAGKPRMV 274


>gi|315660272|ref|ZP_07913127.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           lugdunensis M23590]
 gi|315494699|gb|EFU83039.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           lugdunensis M23590]
          Length = 279

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY     ++ +   PRPETE ++   L              
Sbjct: 59  AVQRMLLGEPIQYIVGFQSFYGYPFKVNENCLIPRPETEEVMLHFLNGC------HSQGS 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---TNGVSERFDTLQSDW 157
           I+D+GTG+GA+ + + K +P  K +  D+  + L IA+ NA     + +  + D L+   
Sbjct: 113 IVDVGTGSGAIAITIKKLNPQLKVIATDLYKETLTIAQENASYLDADIIFMQGDVLKPLI 172

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             +++   D +++NPPYI       +   V  ++P  +L    +G + Y  I D + + L
Sbjct: 173 QKNIK--VDGLITNPPYISEKETCQMTNTVLKYEPHHALFAENNGFAIYEAILDDLPKVL 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262
           N+D   + EIGY Q + + ++   R   L V   KD    DR++ F
Sbjct: 231 NEDAFVTFEIGYQQGLQLKQLVLQRYPKLDVKVTKDINSLDRIVSF 276


>gi|296454710|ref|YP_003661853.1| HemK family modification methylase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184141|gb|ADH01023.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 313

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 113/233 (48%), Gaps = 24/233 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RI 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + +  ++  R+
Sbjct: 85  RRAKREPLQYITGHTPFRYLDLQVGPGVFIPRPETETVVQAGLDW----LTRHSMIHPRM 140

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDW--- 157
           +DL  G+GA+ L+++ E P  +   V++S +  E  + N AVT   ++R+ ++ S++   
Sbjct: 141 VDLCAGSGAIGLSIVSEVPGSQVWAVELSPRTAEWTRRNLAVT---AKRYPSIASNYQLE 197

Query: 158 ---------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
                     + ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG     
Sbjct: 198 VADATSLATLAQLDGTIDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSADGTLIPE 256

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            I +   R L   G+  +E    Q   +V   ++      +  KD+ G DR L
Sbjct: 257 RIIERAWRLLKPGGVLVMEHDLTQGERLVAYAKATGFATASTGKDWTGRDRYL 309


>gi|315038003|ref|YP_004031571.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112]
 gi|325956456|ref|YP_004291868.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus 30SC]
 gi|312276136|gb|ADQ58776.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112]
 gi|325333021|gb|ADZ06929.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus 30SC]
 gi|327183283|gb|AEA31730.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus amylovorus GRL 1118]
          Length = 281

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 19/258 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  +  +  D VL + Q       I +  +  S   ILG+  F   ++ +   
Sbjct: 29  LAERLNLTPSEFELKQDMVLSEDQVKQANKDIKKLARGVSPQYILGYAWFLGYKIMVQRG 88

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV+ AL  SL   +K     +LDLGTG+G + +AL KE+   KG+     
Sbjct: 89  VLIPRFETEELVEWALK-SLKSGDK-----VLDLGTGSGCITVALAKEAEK-KGIKDLTL 141

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +     T +++    +E  FD I+SNPPYI++     + 
Sbjct: 142 YASDITDSALRTSEENFLNYDLD--VTTRKANVLIGLEK-FDKIISNPPYIKTNEKKDMD 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G+N++  +  +F +++L
Sbjct: 199 KNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFNEEEQLKELF-AKEL 257

Query: 245 --FLVNAFKDYGGNDRVL 260
             F +   KD  G  R++
Sbjct: 258 PDFEIEFRKDMAGKPRMV 275


>gi|152981411|ref|YP_001353763.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Janthinobacterium sp. Marseille]
 gi|151281488|gb|ABR89898.1| modification methylase HemK [Janthinobacterium sp. Marseille]
          Length = 296

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/140 (38%), Positives = 78/140 (55%), Gaps = 3/140 (2%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P +   D V  IL+L TG+G + + L    P      VDIS  ALE+AK N     +  R
Sbjct: 122 PWVSNPDKVNNILELCTGSGCLPIMLADAFPNAHVDAVDISTDALEVAKRNVEEYELGHR 181

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + ++SD +++V E  FD+I++NPPY+ S  +D L  E    +P+I+L GG DG+   R 
Sbjct: 182 INLIESDLYANVPEYKFDLIITNPPYVNSGSMDKLPPEYLR-EPQIALAGGTDGMDLVRK 240

Query: 209 IADGVSRHLNKDGLCSVEIG 228
           I  G  + L  +GL  VEIG
Sbjct: 241 IVAGAGQRLTPNGLLMVEIG 260


>gi|124266993|ref|YP_001020997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylibium petroleiphilum PM1]
 gi|124259768|gb|ABM94762.1| Site-specific DNA-methyltransferase (adenine-specific) [Methylibium
           petroleiphilum PM1]
          Length = 288

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 5/165 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P     G D+S  AL +AK N   +G+ +R   L+SD  +
Sbjct: 123 RVLDLCTGNGSLAVLAAMAWPEVSVDGSDLSEDALAVAKINVDAHGLGDRVTLLRSDGLA 182

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G +D+I+ NPPY+ +  +  L  E R  +P ++L GG DG+   R +       + +
Sbjct: 183 RVHGPYDLILCNPPYVNAASMADLPPEYR-AEPELALAGGEDGMDFVRKLLQDAPAQMTE 241

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           D +  +EIG N++ +  R F + +       +   G+D+VLL  R
Sbjct: 242 DAVLVLEIG-NERANFERAFPTIEAVW---LETSAGDDQVLLLTR 282


>gi|311745454|ref|ZP_07719239.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Algoriphagus sp. PR1]
 gi|126578006|gb|EAZ82226.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Algoriphagus sp. PR1]
          Length = 277

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 19/263 (7%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +Q L + H  L +V GL+     V  DS+ +D     L   + R    E +  I+G   F
Sbjct: 27  IQWLLEYHLGLRKVDGLNE----VKEDSLSED-----LFEDLQRLKSGEPVQYIIGKAPF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +      PR ETE LV   +     +      +++LD+GTG+G + ++L  E  
Sbjct: 78  YGRDFFVDESVLIPRNETEELVHMII-----KQNPSAGLKVLDIGTGSGCIPISLALELN 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +    D+S +ALE+A+ NA   G    F  L  D       L   D++VSNPPY+   
Sbjct: 133 KPEIYTADVSEEALEVAEENAEHLGAQVTFFHL--DILKDTPALSELDIVVSNPPYVPEA 190

Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             D L   VRDF+P ++L     D L  YR IA+   + L   G    EI  N     V+
Sbjct: 191 EWDELHSNVRDFEPGLALFVPDHDPLLFYRVIAEKALKLLKPGGKLYYEIHNNFGPQTVK 250

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           + ES     ++  +D  G DR++
Sbjct: 251 LLESLGYKNIDLVQDLNGKDRMV 273


>gi|332535244|ref|ZP_08411048.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035325|gb|EGI71828.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 311

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 2/136 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E + V RILDL TG+G + +AL +     +   VDIS +ALE+   N     ++ER   +
Sbjct: 136 EPQSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLTERVLPI 195

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           QSD FS V G  +D+IV+NPPY+++  +  L  E    +P + L  G DGL   RTI   
Sbjct: 196 QSDVFSGVPGQKYDLIVANPPYVDAEDMADLPREFH-HEPELGLASGHDGLDVTRTILSE 254

Query: 213 VSRHLNKDGLCSVEIG 228
            S HL  +GL  VE+G
Sbjct: 255 ASEHLTDNGLLFVEVG 270


>gi|330444668|ref|YP_004377654.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58]
 gi|328807778|gb|AEB41951.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58]
          Length = 288

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 111/260 (42%), Gaps = 10/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++ S L  + GLSS+  + D   V +     +     +R  K        G   F  + 
Sbjct: 33  REAASILMDLLGLSSYSQLSDVPYVSEKIIEAYQKRLKLRGEKRCPTAYFHGSVSFLGLS 92

Query: 65  LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           L + S    PR ETELL +  + +  S P I+      + D+  G+G + LA+    P  
Sbjct: 93  LNIDSRVLIPRMETELLAERVITYISSHPEIQV-----VYDVCCGSGCIGLAIKNACPQV 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  DIS KA+ +AK NA    +    +    D F       D  V NPPY+    V  
Sbjct: 148 QVVLSDISPKAVAVAKENARNTRLD--VEVYLGDLFEPYSSPGDAFVCNPPYLSYKEVIR 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EV   +P  +L GG  G+  Y+ IA  + + L   G+  +EIGY Q   V  IF  R
Sbjct: 206 TDPEVHCHEPWQALVGGATGVEFYKRIAQELPKVLKPRGVGWLEIGYTQGSQVKDIF-LR 264

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
           +       +D+ G DR    
Sbjct: 265 QGISGEIQQDFAGWDRFFFL 284


>gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Krokinobacter diaphorus 4H-3-7-5]
          Length = 288

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 14/236 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIE 94
           L +   R  + E I  I+G  +FY +   ++  T  PRPETE LVD  +   A S  + E
Sbjct: 58  LNDVTGRLSRSEPIQYIVGTTEFYGIEFQVNPATLIPRPETEELVDWIITDKAESFVKSE 117

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            ++ ++ILD+GTG+G + ++L K         +DIS  AL  A  NA  N V   F    
Sbjct: 118 TQEKLKILDIGTGSGCIAISLAKYMSKAHVEAIDISQDALATAYQNAKRNEVDVTFYNQD 177

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213
                 +E  +D+IVSNPPY+  +    +   V   +P  +L     D L  YR I +  
Sbjct: 178 VLAVEELEHKYDIIVSNPPYVRMLEKKEMRDNVLSNEPDSALFVSDDDPLIFYRKIGELA 237

Query: 214 SRHLNKDGLCSVEIGY---NQKVDVVRI--FESRKLFLVNAFKDYGGNDRVLLFCR 264
              L+ +G    EI      + +D++++  FE+     V   +D  G DR++   R
Sbjct: 238 FESLSVNGFLYFEINEYLGKEMIDLLKVIGFEN-----VELREDMFGKDRMIKASR 288


>gi|304311242|ref|YP_003810840.1| Adenine-specific methylase [gamma proteobacterium HdN1]
 gi|301796975|emb|CBL45188.1| Adenine-specific methylase [gamma proteobacterium HdN1]
          Length = 319

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 2/139 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P I    V  ILDL TG+G + +A     P      VDIS  AL+IA+ N    G+  + 
Sbjct: 138 PWIAAERVESILDLCTGSGCIGIACAHHFPDVIVDCVDISEAALDIAEENLQNLGLESQV 197

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + + SD F +++G  +D+IVSNPPY++   +  L  E R  +P + L+ G DGL   R I
Sbjct: 198 NLIFSDLFEALDGRTYDIIVSNPPYVDERDMAELPTEYR-HEPELGLEAGGDGLDIVRRI 256

Query: 210 ADGVSRHLNKDGLCSVEIG 228
              +SRHLN +G+  +E+G
Sbjct: 257 LPELSRHLNPEGIAVIEVG 275


>gi|307213045|gb|EFN88576.1| HemK methyltransferase family member 1 [Harpegnathos saltator]
          Length = 366

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 28/236 (11%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILD 103
           L    +  I+G  DF ++ + L    F PRPETE+LVD    F L R+    +    IL+
Sbjct: 128 LSRMPVQYIIGEWDFRDITVKLVPPVFIPRPETEILVD----FVLKRLNSSPLENCEILE 183

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFS 159
           +G G+GA+ LAL       K   +D S  A ++  +N     + + ++    TL+ D   
Sbjct: 184 IGCGSGAISLALAHACKKIKCTAIDASPHACDLTMTNRSQLNLMDQIAVIHATLKPDATV 243

Query: 160 SVEGL-------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            V  +             FD +VSNPPY+ +  +  L  E++ ++   +LDGG DGL   
Sbjct: 244 EVTSMSNGAGKMDLNSKQFDFVVSNPPYVPTKKILDLEPEIKIYEDLRALDGGDDGLKVI 303

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDR 258
           + +    ++ L   G   VE+      + ++ F ++    KL   + +KD+  NDR
Sbjct: 304 KPLLRYSAKALKPGGRLLVEVDSTHP-EYIKFFTNKYSDLKLHYEHTYKDFCNNDR 358


>gi|297626233|ref|YP_003687996.1| methylase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921998|emb|CBL56560.1| Methylase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 292

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 101/226 (44%), Gaps = 4/226 (1%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVR 100
           I R    E +  + G   F  + + +    F PRPETE +V  AL   L  R +      
Sbjct: 62  IRRRAAGEPVQYLTGRAWFRKIDVQVGPGVFIPRPETEAVVHFALDQLLNLRADTGPSPV 121

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           I+DLGTG+G +  ++L E P    +  V+ S +ALE A+ N      +     + +D   
Sbjct: 122 IVDLGTGSGVIAKSILSEYPGTPRMYAVERSPQALEWARRNLADTPATVVAGDM-ADALP 180

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +EG  D+++SNPPY+ +   D L  +V D+DP  +L GG DGL   R I    +R L  
Sbjct: 181 QLEGKVDLVISNPPYLPAAHADELPADVLDYDPHEALFGGDDGLETIRGIVPVATRLLRP 240

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
            G   VE    Q      I  +   F  V    D  G  R +   R
Sbjct: 241 GGWLIVEHDDTQGHSAAGIISAAGRFEHVEDHPDLTGRPRFVTAIR 286


>gi|256380140|ref|YP_003103800.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
 gi|255924443|gb|ACU39954.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
          Length = 288

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 111/264 (42%), Gaps = 22/264 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+H     + G+   ++++ P     VLD+        A    L+H     + G    + 
Sbjct: 28  DAHLLAAHLLGVPPGKLVLTPMVEPRVLDELGALVAKRATRVPLQH-----LTGEAHLWG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETELLV+ AL     R   R VV  +DL TG+GA+ L++    P  
Sbjct: 83  VDLAVGPGVFIPRPETELLVEWALNAV--RGAARPVV--VDLCTGSGALALSIAHHRPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               V+    AL  A+ NA     +          D       S ++G  D++V NPPY+
Sbjct: 139 VVHAVEKDPTALSWARRNADARSAAGDTPIRLHHGDVTAPGVLSDLDGAVDLVVCNPPYV 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  +  EV D DPR ++ GG DGL   R +    +R L   G  ++E        V
Sbjct: 199 PDATE--VQPEVADHDPRAAVFGGADGLDVIRHVVTLAARLLKPGGHVAIEHDDTHGEAV 256

Query: 236 VRIFESRKLFL-VNAFKDYGGNDR 258
             +  +RK+       +D  G  R
Sbjct: 257 PALLATRKVLADATPHRDLAGRPR 280


>gi|242371608|ref|ZP_04817182.1| HemK family methyltransferase [Staphylococcus epidermidis
           M23864:W1]
 gi|242350675|gb|EES42276.1| HemK family methyltransferase [Staphylococcus epidermidis
           M23864:W1]
          Length = 278

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 18/227 (7%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R LK E I  I+G++ FY  +  + ++   PRPETE ++   L         R+   
Sbjct: 59  ALHRMLKGEPIQYIVGFQSFYGYKFKVDANCLIPRPETEEVMLHFLKLC------RNKDG 112

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+GTG+GA+ + L    P       D+    L +A++NA T+     F  LQ +    
Sbjct: 113 VVDIGTGSGAIAVTLKLLRPDLDVYATDLYEDTLNVARNNADTHQQDIHF--LQGNALKP 170

Query: 161 V--EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  +G+  D ++SNPPYI+      +   V  F+P  +L     G + Y  I   + + +
Sbjct: 171 LIEKGIKVDGLISNPPYIDEAESKDMDDTVLQFEPHHALFAENKGYAIYEDILKDLPQVM 230

Query: 218 NKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           N++G    EIGYNQ    K  V  ++ +++   V   +D  G+ R++
Sbjct: 231 NENGHVVFEIGYNQGEKLKSIVTTMYPNKE---VEVIRDINGHQRIV 274


>gi|158604957|gb|ABW74773.1| bifunctional methyltransferase [Campylobacter concisus 13826]
          Length = 270

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 118/263 (44%), Gaps = 32/263 (12%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R +   L     +S   + ++  S  D+   F L   + R   +E +  I G   FY + 
Sbjct: 23  RVAKILLMSYLDVSIEWIFLNQKSECDESGYFAL---VKRFENYEPLEYITGKAGFYGLE 79

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFK 123
             + S    PRPETE+LVD  L  +          +I ++GTG+G + + L LK +   K
Sbjct: 80  FEVESGVLIPRPETEILVDKVLEIA----SSYKAPKIAEIGTGSGIISVMLALKTNA--K 133

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  DI+ KAL +AK NA+   VS++ + ++  +   + G  D++VSNPPYI        
Sbjct: 134 IVATDINEKALNLAKKNALKFNVSDKIEFIKCSYIDEISGDIDILVSNPPYI-------- 185

Query: 184 GLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               RD+        +P  +L GG  G    + I         K+  C  E+GY+Q+V +
Sbjct: 186 ---ARDYKLDKFVINEPHEALFGGEIGDEILKNIILIARNRDIKNIAC--EMGYDQRVSM 240

Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258
               +    F    +KD  G DR
Sbjct: 241 EMALKFNG-FKSAFYKDLAGFDR 262


>gi|295692624|ref|YP_003601234.1| protoporphyrinogen oxidase [Lactobacillus crispatus ST1]
 gi|295030730|emb|CBL50209.1| Protoporphyrinogen oxidase [Lactobacillus crispatus ST1]
          Length = 281

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 19/219 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  F   ++ +      PR ETE LV+    ++L  ++  D  ++LDLGTG+G
Sbjct: 68  SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVE----WALQTLKSGD--QVLDLGTGSG 121

Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
            + +AL KE+   KG+        D++  AL  ++ N +T  +     T +++    +E 
Sbjct: 122 CITVALAKEAQK-KGITDLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE 178

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD I+SNPPYI++   + +   V   +P+ +L  G DGL  Y+  A  V  HLN  G  
Sbjct: 179 -FDKIISNPPYIKTSEKNAMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEF 237

Query: 224 SVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVL 260
            +E G++++  +  +F +++L  F +   KD  G  R++
Sbjct: 238 FLEFGFSEEEQLKELF-AKELPDFEIEFRKDMAGKPRMV 275


>gi|226939724|ref|YP_002794797.1| adenine-specific methylase [Laribacter hongkongensis HLHK9]
 gi|226714650|gb|ACO73788.1| Probable adenine-specific methylase [Laribacter hongkongensis
           HLHK9]
          Length = 303

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 11/178 (6%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           P IE  ++V   LDL TG+G  CLA+L     P      +D+S  ALE+A  N    G+ 
Sbjct: 123 PWIEHPELVHSALDLCTGSG--CLAILTALYYPDADVDAIDLSPDALEVAGINVGRYGMQ 180

Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD ++ V GL +D+IVSNPPY+++  V  L  E    +P ++L  G DGL   
Sbjct: 181 DRIRLVESDLWAGVAGLSYDLIVSNPPYVDAESVAALPDEYLK-EPELALGSGDDGLEAT 239

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I +  + HLN  G+  VEIG+N+  DV+ +   +  F     +  GG+  V L  R
Sbjct: 240 RRILEEAAAHLNPFGVLVVEIGHNR--DVLEMQYPQLPF--TWLETSGGDGFVFLLTR 293


>gi|83645219|ref|YP_433654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hahella chejuensis KCTC 2396]
 gi|83633262|gb|ABC29229.1| Methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
          Length = 301

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 6/208 (2%)

Query: 27  DSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L D ++  L  AI  R L+      ILG   F  +   ++ D   PR     L++  
Sbjct: 62  DARLVDHEKLALAEAIGKRVLQRIPTPYILGEAWFMGLPFHITQDVLIPRSPIAELLEHE 121

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L    P +E+  + RILDL  G+G + +A     P  + V  DIS  AL++A+ N   + 
Sbjct: 122 LQ---PWLEQPPL-RILDLCCGSGCIGIAAAHVFPEAEVVLADISPLALDVARRNVARHH 177

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +R   ++SD F +++G FDVI++NPPY++   +D L  E    +P + L  G+DGL  
Sbjct: 178 LGDRCKVVESDMFDALQGEFDVILTNPPYVDKPDMDSLPPEYL-HEPELGLASGVDGLDA 236

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            R I    +  L+  G    E+G + + 
Sbjct: 237 ARIILARAADFLSDGGFMVCEVGNSMEA 264


>gi|119898299|ref|YP_933512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Azoarcus sp. BH72]
 gi|119670712|emb|CAL94625.1| site-specific DNA-methyltransferase (adenine-specific) [Azoarcus
           sp. BH72]
          Length = 320

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P +E    V   LDL TG+G + + +    P  + VGVD+S  AL++A  N    G+ +R
Sbjct: 145 PWVEDPEQVSSALDLCTGSGCLAILMAHAFPNAQIVGVDLSDDALDVAAENVADYGLEDR 204

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + ++SD F +++G  FD I+SNPPY+ +  +  L  E    +PR++L  G DGL   R 
Sbjct: 205 VELVKSDVFDALDGRRFDFILSNPPYVTADAMASLPPEYL-HEPRMALAAGDDGLDVVRR 263

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      HL   G  +VE+G+N+ + V   F       ++     GG+D + L  R
Sbjct: 264 LLAQARDHLTPKGFLAVEVGHNRDI-VEAAFPELSFTWLSC---RGGDDMIFLLHR 315


>gi|148377996|ref|YP_001256872.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2]
 gi|148292042|emb|CAL59434.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2]
          Length = 240

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 14/209 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHR------ILGWRDFYNVRLTLSSDTFEPRPETEL 80
           D +L +++R+ L    V SL+ E +++      I+G+ ++ NVR+ L+     PR ETE 
Sbjct: 5   DDLLLEKKRYGLE-LKVSSLELEKLNQGYPIQYIMGYVEYVNVRINLNHKVLIPRYETEE 63

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV   L   L     +  +++LDL TG+G + +AL K          DI  +A+  A  N
Sbjct: 64  LVYILLNEHL-----KPGMKVLDLCTGSGFIGIALKKNLDSINVTLSDIDNEAIMQANEN 118

Query: 141 AVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N   +E    +QSD F  ++G FD+IVSNPPY++    D +   V+ F+P I+L   
Sbjct: 119 VALNFKDTEGIKVVQSDCFKDIKGKFDLIVSNPPYLDYDDKD-VDESVKKFEPEIALFAK 177

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             G   Y  I +    +LN  G+ + EI 
Sbjct: 178 DSGWYFYEKILNEAKIYLNVGGVLAFEIN 206


>gi|313837662|gb|EFS75376.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA2]
 gi|314927457|gb|EFS91288.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL044PA1]
 gi|314972602|gb|EFT16699.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA3]
 gi|328907543|gb|EGG27309.1| putative methylase [Propionibacterium sp. P08]
          Length = 291

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC   G+   Q+I       DD  RF     + R    E    I+G   F  +R+
Sbjct: 28  DARMLLCEALGIQPSQLIRVASVHADDEDRF--NEMVDRRRAGEPAQFIVGHAWFRGLRV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + A+  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQAVQEAQRLVMASACPSVVDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL  A+ N   +GV    + L  D     +    FDV+V+NPPY+  +    +
Sbjct: 146 AVEMDEAALTWARRNLCDSGV----EILAGDALRVPDDGRRFDVVVTNPPYLRRIDASSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV   +P ++L  G DGL   R +    +  L   GL  +E    Q+ +++    +  
Sbjct: 202 PDEVTGHEPDLALFSGDDGLDLPRQLVGRAAELLTAGGLFIMEHDETQRDELMTAMATSH 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|291514584|emb|CBK63794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alistipes shahii WAL 8301]
          Length = 279

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 26/262 (9%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
           + +  ++GLS   ++ DP++ L       L  A  R    E +  ++G  +FY  R  + 
Sbjct: 29  AAVAELSGLSPSALLTDPEAELAVEG---LEEAAARLAAGEPLQYVVGHTEFYGRRFAVR 85

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LVD+ L        +R+  R+LD+GTG+G +  +L    P  +    D
Sbjct: 86  EGVLIPRPETEELVDAILHG------EREARRLLDVGTGSGCIAASLALGMPGTEVFAAD 139

Query: 129 ISCKALEIAKSN------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           IS  AL +A  N      AVT   ++  + L+  +       FD IVSNPPY+       
Sbjct: 140 ISDDALTVAAENFQQLGAAVTLRKADALNGLEEAFPER----FDAIVSNPPYVPESDRAA 195

Query: 183 LGLEVRDFDPRISL----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +   VRD +P ++L    D   D +  YR IA    + L   G    EI      ++VR+
Sbjct: 196 MHPNVRDHEPGLALFVPDD---DAIRFYRAIARAGRQMLTPGGRLWFEIYERAAAEIVRM 252

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
             +         +D  G  R++
Sbjct: 253 LGAEGYTDTEVREDLFGKPRMV 274


>gi|33596609|ref|NP_884252.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella parapertussis 12822]
 gi|33601164|ref|NP_888724.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella bronchiseptica RB50]
 gi|33573310|emb|CAE37293.1| putative adenine-specific methylase [Bordetella parapertussis]
 gi|33575599|emb|CAE32677.1| putative adenine-specific methylase [Bordetella bronchiseptica
           RB50]
          Length = 298

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 10/162 (6%)

Query: 74  PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130
           PR     L+D  LA   P + +   V R LD+ TG+G  CLA+L     P  +   VD+S
Sbjct: 109 PRSPIAELLDEGLA---PWVRDPLQVERALDMCTGSG--CLAILAALAFPVAQVDAVDVS 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A  N    G+ +R    Q + F ++    +DVIV NPPY+    +D L  E R 
Sbjct: 164 SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMDALPQEYR- 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            +P ++L GG DG+   R I      +L+ DG+  +EIG+ +
Sbjct: 223 HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHER 264


>gi|31615726|pdb|1NV8|A Chain A, N5-Glutamine Methyltransferase, Hemk
 gi|31615727|pdb|1NV8|B Chain B, N5-Glutamine Methyltransferase, Hemk
 gi|31615728|pdb|1NV9|A Chain A, Hemk, Apo Structure
          Length = 284

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  +   +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 81  LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 136

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++
Sbjct: 137 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 195

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 196 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 246

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +EIG +Q  ++ +I  S  +FL    KD  G  R LL  R
Sbjct: 247 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 281


>gi|300361413|ref|ZP_07057590.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|300354032|gb|EFJ69903.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri
           JV-V03]
          Length = 280

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 14/197 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  FY  ++ ++     PR ETE LV  AL  ++   EK     ILDLGTG+G
Sbjct: 67  SPQYILGYAWFYGYKILVNRGVLIPRFETEELVKWALE-NIKSGEK-----ILDLGTGSG 120

Query: 110 AVCLALLKESPFFKGVGV-----DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+ +AL+K++   K   +     DI+  AL  ++ N +   +  +  T +++    +E  
Sbjct: 121 AIMVALVKQAQDQKIENLILYASDITDAALRESEENFLKYDLDVK--TRKANVLVGLEK- 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD IVSNPPYI++   + +   V   +P  +L GG DGL  YR  A  +  HL   G   
Sbjct: 178 FDTIVSNPPYIKTSEKNLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFF 237

Query: 225 VEIGYNQKVDVVRIFES 241
           +E  +++K  +  +FE+
Sbjct: 238 LEFSFSEKDQLKDLFET 254


>gi|170288248|ref|YP_001738486.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotoga sp. RQ2]
 gi|170175751|gb|ACB08803.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotoga sp. RQ2]
          Length = 282

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  + L +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 79  LHYILGEKEFMGLSLLVEEGVFVPRPETEELVELALE----LIRKYGIKAVADIGTGSGA 134

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+E+A+ NA  +GVS+RF   + ++    +  F   ++
Sbjct: 135 IGVSVAKFSDVVV-FATDVSSKAVEVARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 193

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPAEALFGGEDGLDFYREF---FGRYNTSGKIVL 244

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +EIG +Q  ++ +I  S  +FL    KD  G  R L   R
Sbjct: 245 MEIGEDQVEELKKIV-SDAVFL----KDSAGKYRFLFLNR 279


>gi|220904892|ref|YP_002480204.1| modification methylase, HemK family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869191|gb|ACL49526.1| modification methylase, HemK family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 305

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 103/240 (42%), Gaps = 19/240 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R    E +  I G ++FY     ++  T  PRPETELLVD A+  +   I+  D
Sbjct: 57  LNTLLARRAAGEPLAHITGSKEFYGRDFAVTPHTLIPRPETELLVDKAIEAARKIIDAAD 116

Query: 98  VVRI----------------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
              +                 DLG G+G + + L  E P ++GV VDIS +A++ A+ NA
Sbjct: 117 RQGLRHAKTEGTPAGCGPCFADLGCGSGCIGITLALELPHWQGVLVDISPEAVQTARHNA 176

Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            + G   R   L  D        G + ++VSNPPYI       +  EV + +P  +L   
Sbjct: 177 ASLGAQNRVWCLPGDMTRPPLARGAYTMLVSNPPYIAESERSMVMGEVLEHEPHSALFSP 236

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDR 258
             GL+H        +  L   G+  +E G  Q     R+     LF      +D  G +R
Sbjct: 237 RQGLAHLAAAIQAAAWALVPGGVLLLEHGAAQGAATRRLLREHDLFEAPVTHRDMAGLER 296


>gi|194368828|pdb|1SG9|A Chain A, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
 gi|194368829|pdb|1SG9|B Chain B, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
 gi|194368830|pdb|1SG9|C Chain C, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
          Length = 276

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  +   +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 72  LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 127

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++
Sbjct: 128 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 186

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 187 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 237

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +EIG +Q  ++ +I  S  +FL    KD  G  R LL  R
Sbjct: 238 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 272


>gi|227877272|ref|ZP_03995345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256842835|ref|ZP_05548323.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 125-2-CHN]
 gi|256848801|ref|ZP_05554235.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US]
 gi|262045801|ref|ZP_06018765.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus MV-3A-US]
 gi|293381670|ref|ZP_06627651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 214-1]
 gi|312977645|ref|ZP_07789392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus CTV-05]
 gi|227863128|gb|EEJ70574.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256614255|gb|EEU19456.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 125-2-CHN]
 gi|256714340|gb|EEU29327.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US]
 gi|260573760|gb|EEX30316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus MV-3A-US]
 gi|290921717|gb|EFD98738.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 214-1]
 gi|310895384|gb|EFQ44451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus CTV-05]
          Length = 281

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 19/219 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           S   ILG+  F   ++ +      PR ETE LV+    ++L  ++  D  ++LDLGTG+G
Sbjct: 68  SPQYILGYAWFLGYKIMVQRGVLIPRFETEELVE----WALQTLKSGD--QVLDLGTGSG 121

Query: 110 AVCLALLKESPFFKGV------GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
            + +AL KE+   KG+        D++  AL  ++ N +T  +     T +++    +E 
Sbjct: 122 CITVALAKEAQK-KGITDLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE 178

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD I+SNPPYI++   + +   V   +P+ +L  G DGL  Y+  A  V  HLN  G  
Sbjct: 179 -FDKIISNPPYIKTSEKNVMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEF 237

Query: 224 SVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVL 260
            +E G++++  +  +F +++L  F +   KD  G  R++
Sbjct: 238 FLEFGFSEEEQLKELF-AKELPDFEIEFRKDMAGKPRMV 275


>gi|284032944|ref|YP_003382875.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
 gi|283812237|gb|ADB34076.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
          Length = 277

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 8/240 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G+S  Q+ +   +     Q   L +   R  + E +  + G   F    L
Sbjct: 25  DAAELLAFVCGVSRLQLGLVDVTTAQQTQYDVLVD---RRAQREPLQHLTGTAAFRYREL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE+LV     + L R++  +   ++DL +G+GA+  A+  E P     
Sbjct: 82  VVGPGVFVPRPETEVLV----GWMLDRLKDVEAPLVVDLCSGSGAIAGAVATERPDSTVH 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            V++S +A   A+ N    G +     +       ++G  D +++NPPYI     + +  
Sbjct: 138 AVELSPEACGWARRNLEGTGATLHEGDIDG-CLPELDGQVDAVIANPPYIPLTAWESVTA 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DP ++L  G DGL   + +A    R L   G    E    Q      +F +  LF
Sbjct: 197 EVRDHDPALALWSGDDGLDEIKVVAATAGRLLKPGGWFGCEHADVQGESAPAVFAATGLF 256


>gi|330502852|ref|YP_004379721.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina NK-01]
 gi|328917138|gb|AEB57969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina NK-01]
          Length = 306

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 8/215 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +   L   + R ++       +LG   F  +   +      PR     L+D  
Sbjct: 60  DCRLEDDEHAHLQALLQRRIEERVPTAYLLGEAWFCGLPFVVDERVLVPRSPIAELIDRH 119

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            +  LP IE     RILDL TG+G + +A   E P  + V  D+S +ALE+A  N   +G
Sbjct: 120 FSPWLP-IEP---ARILDLCTGSGCIGIACAYEFPEAEVVLGDLSFEALEVANLNIERHG 175

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER   +Q D F+ + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL 
Sbjct: 176 LEERVYCVQGDGFAELPGQRFDLIVSNPPYVDAEDFADMPAEYQH-EPEMGLACGADGLD 234

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +    + HL + G+  VE+G N +V V  ++
Sbjct: 235 LVRRMLAEAADHLTERGVLIVEVG-NSQVHVEALY 268


>gi|15643254|ref|NP_228298.1| hemK protein [Thermotoga maritima MSB8]
 gi|4980999|gb|AAD35573.1|AE001726_7 hemK protein [Thermotoga maritima MSB8]
          Length = 282

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 115/220 (52%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  +   +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 79  LHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 134

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++
Sbjct: 135 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEM 193

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 244

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +EIG +Q  ++ +I  S  +FL    KD  G  R LL  R
Sbjct: 245 MEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 279


>gi|160933138|ref|ZP_02080527.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753]
 gi|156868212|gb|EDO61584.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753]
          Length = 206

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 10/205 (4%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +      PR +T  LV      ++ R++      ILDL  GTGAV L + +E P
Sbjct: 1   MDMELAVGPGVLIPREDTIPLVLE----TVQRLKNFSAPVILDLCAGTGAVGLGVARELP 56

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             K + V++S  AL   + N    G   R   ++ D  +  +GL     D +VSNPPYI 
Sbjct: 57  DAKVICVELSPLALPYLERNLSRYG-EGRVRAVKGDVLNGPDGLSLPLVDAVVSNPPYIC 115

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  EVR  +PR++LDGG DGLS YR I +     L   G+ +VEIG  Q+  V 
Sbjct: 116 TGELPGLQKEVRQ-EPRLALDGGPDGLSFYRAITNNWLGLLKPGGVAAVEIGNGQENAVA 174

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            + ++  +  +   +D  G  RV++
Sbjct: 175 DLLKTAGVSQITFSQDITGAIRVVI 199


>gi|254786508|ref|YP_003073937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Teredinibacter turnerae T7901]
 gi|237684513|gb|ACR11777.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Teredinibacter turnerae T7901]
          Length = 305

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 19/216 (8%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPR-PET 78
           ++I D    +D+++R F  +AI R +K +     I G   F  +R  ++ +   PR P  
Sbjct: 57  ELIYDTRLTVDEKKRVF--HAIGRRIKEKVPAAYITGEAIFGGLRFEVNENVLVPRSPIA 114

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALE 135
           ELL++    +      + D   +LDL TG+G  C+ +L  S  F+G  VDIS     AL 
Sbjct: 115 ELLLNGMHPWF-----QEDPASVLDLCTGSG--CIGILAAS-VFQGSEVDISDISASALA 166

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A  N   + + +R   ++SD F++   +   +D+I+SNPPY+++  +  +  E    +P
Sbjct: 167 VAARNIRNHELVDRVTAIESDLFNAPHFIGRKYDLILSNPPYVDAHDLSSMPAEYHA-EP 225

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGLS  R I    S+HL ++GL  VE+G
Sbjct: 226 VLGLAAGNDGLSLARRILRDASKHLTRNGLLVVEVG 261


>gi|269793493|ref|YP_003312948.1| methylase of HemK family [Sanguibacter keddieii DSM 10542]
 gi|269095678|gb|ACZ20114.1| putative methylase of HemK family [Sanguibacter keddieii DSM 10542]
          Length = 275

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 14/202 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L+  + R +  E +  +LGW +   VR+ L+   F PR  T LLV+ A A + P      
Sbjct: 44  LSTLLARRVAGEPLELVLGWAELAGVRVALAPGVFVPRQRTRLLVEQAAARARPGSV--- 100

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFD---TL 153
              +LDL  GTGAV LA+    P  +    D+   A+  A+ N   T+ V+ R       
Sbjct: 101 ---VLDLCCGTGAVGLAVALAVPGVELHASDLDPDAVACARLNVEDTSSVAPRHPQGTVY 157

Query: 154 QSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + D F     S+ G  DV+V N PY+ +  V  +  E R  +  ++LDGG DGL   R +
Sbjct: 158 EGDLFDALPDSLRGRVDVLVVNAPYVPTAAVPLMPAEARVHEHLLALDGGSDGLEVQRRV 217

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231
           A      L + G   +E    Q
Sbjct: 218 AQRAGEWLARRGYLVIETSERQ 239


>gi|264678482|ref|YP_003278389.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
 gi|262208995|gb|ACY33093.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
          Length = 315

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 7/168 (4%)

Query: 98  VVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V++LDL TG G++ CLA +   P  +  G DIS  AL +A+ N   +G+ +R   L+S+
Sbjct: 138 TVQVLDLCTGNGSLACLAAMA-YPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESN 196

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S V G +D+++ NPPY+ S  +  L  E +  +P ++L GG DG+   R + + +   
Sbjct: 197 GMSQVPGPWDLVLCNPPYVNSDSMGKLPAEYQ-AEPELALAGGADGMDFIRRLLEDLPAR 255

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L+KD +  +EIG N+K      F    +F ++      G+++VLL   
Sbjct: 256 LSKDAVVVLEIG-NEKPYFEAAFPDLPVFWLDTSS---GDEQVLLITE 299


>gi|50365448|ref|YP_053873.1| polypeptide chain release factor methylase [Mesoplasma florum L1]
 gi|50364004|gb|AAT75989.1| polypeptide chain release factor methylase [Mesoplasma florum L1]
          Length = 300

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 134/269 (49%), Gaps = 15/269 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +T +   +V+   + VL+ +Q   +     +  K + +  ILG++ F   ++
Sbjct: 37  DAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGKPLAYILGYKIFRTHKI 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++ +T  PR ETEL+VD    F   + EK   + +LDL  G+G   + +A+  +     
Sbjct: 97  LVNKNTLIPRMETELIVDYVNEFINSQNEK---ISVLDLCCGSGCIGISIAIENKDKMEN 153

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
               DIS KAL I   N   N +      ++SD+ +S+   +  F+++V NPPYI+   V
Sbjct: 154 VTFSDISKKALNITSKNIENNNLVNWTKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN--KDGLCSVEIGYNQKVDVVRI 238
           D   +  + ++P+++L    +GL  Y+     + + ++  K+ L   EIG+ Q+ + + +
Sbjct: 214 DVDKM-TKKYEPKLALFAKDNGLFFYKEAIKNIDKFMDITKNILIVFEIGWKQEKE-LDV 271

Query: 239 FESRKLFLVNAF---KDYGGNDRVLLFCR 264
           F  ++L L   +   KDY  N R L+  +
Sbjct: 272 FLKQELGLKYKWKFEKDYFNNLRYLILTK 300


>gi|115763476|ref|XP_001201549.1| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus
           purpuratus]
 gi|115953212|ref|XP_791896.2| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus
           purpuratus]
          Length = 390

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 107/225 (47%), Gaps = 29/225 (12%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           +D   +L   +R  +     + L    +  ILG  DF ++ L + +  F PRPETE+LVD
Sbjct: 117 IDQSRILSTEERSRVMELASQKLARVPMQYILGEWDFRDLTLKMKAPVFIPRPETEMLVD 176

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-------------GVDIS 130
             +++     E+ D + IL++G G+GA+ L+LL E  F K V              +D S
Sbjct: 177 LLVSY----YEEDDELDILEVGCGSGAIGLSLLHE--FQKNVLSMFNFHLLAHVTAIDAS 230

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPYIESVIVDC 182
             A+ + + NA   GVS R     +           S     +DVIVSNPPY+ +  +D 
Sbjct: 231 RDAVMLTQDNASRLGVSNRLSVHHTALTDESPLRIHSKYGTRYDVIVSNPPYLFTRDMDD 290

Query: 183 LGLEV-RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           LG E+ R+ DP ++LD G +G+   + I       L   G   +E
Sbjct: 291 LGPEILRNEDP-MALDAGAEGMDVIKAIVKHARFLLKPRGFIWLE 334


>gi|28869244|ref|NP_791863.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28852485|gb|AAO55558.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 302

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 6/179 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+++     +  E +  +P ++L  G DGLS  R +    + HLN+ GL  VE+G +Q
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLSLVRRMLAQAADHLNEKGLLIVEVGNSQ 259


>gi|157821261|ref|NP_001100323.1| hemK methyltransferase family member 1 [Rattus norvegicus]
 gi|149018619|gb|EDL77260.1| HemK methyltransferase family member 1 (predicted) [Rattus
           norvegicus]
 gi|171847399|gb|AAI61944.1| HemK methyltransferase family member 1 [Rattus norvegicus]
          Length = 340

 Score = 83.6 bits (205), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 112/231 (48%), Gaps = 19/231 (8%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRIL 102
           L+   +  ILG  DF  + L ++   F PRPETE LV+  L   A   P +  +D   IL
Sbjct: 106 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPPAVRAQDGPLIL 165

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-- 160
           ++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D  S   
Sbjct: 166 EVGCGSGAIALSLLSQLPKTQVIAVDKEEAAVSLTLENAQRLQLQDRIRIIHLDITSEGC 225

Query: 161 -----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADG 212
                  G  D++VSNPPYI    ++ L  E+R ++  ++LDGG +G+   +H  T+A  
Sbjct: 226 CTHLLPWGPMDLVVSNPPYIFRKDMEQLAPEIRSYEDLVALDGGDEGMDIITHILTLAPW 285

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           +   LN  G   +E+       V    +S+    L LV   +D+ G  R L
Sbjct: 286 L---LNASGSIFLEVDPRHPELVSSWLQSQPDLHLSLVGVREDFCGRPRFL 333


>gi|311109117|ref|YP_003981970.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310763806|gb|ADP19255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Achromobacter xylosoxidans A8]
          Length = 274

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 112/221 (50%), Gaps = 15/221 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R L  E +  +LG R+F   R  ++ D   PRP+TE+LV++AL      +       +LD
Sbjct: 57  RRLAGEPMAYLLGHREFMGHRFRVTPDVLIPRPDTEVLVETALEC----LAGLAAPAVLD 112

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           LGTG+GA+ +++       + +  D+S  AL +A +NA     S R   ++  W+ +V  
Sbjct: 113 LGTGSGAIAISIALARRDARVMASDLSAAALAVAAANAWDLAASVRL--VEGSWYQAVPA 170

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            EG FD+IVSNPPY   V  D   L+  D  F+PR +L  G  GL     I  G  RHL 
Sbjct: 171 GEG-FDLIVSNPPY---VACDDPHLDQGDVRFEPRGALTDGAGGLEDLARIVQGAGRHLK 226

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           + G   +E G++Q   V     +     V++ +D  G +R+
Sbjct: 227 RGGALWLEHGWDQAQAVRDQLAAAGFQDVHSRRDLAGIERI 267


>gi|145222896|ref|YP_001133574.1| HemK family modification methylase [Mycobacterium gilvum PYR-GCK]
 gi|315443361|ref|YP_004076240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycobacterium sp. Spyr1]
 gi|145215382|gb|ABP44786.1| modification methylase, HemK family [Mycobacterium gilvum PYR-GCK]
 gi|315261664|gb|ADT98405.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycobacterium sp. Spyr1]
          Length = 289

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 106/243 (43%), Gaps = 13/243 (5%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           V+PD+    R R    +   R      +  + G   F  V + +    F PRPETE L++
Sbjct: 51  VEPDAAFLSRYR----DLTARRAARVPLQHLTGTAAFGPVVVDVGPGVFIPRPETESLLE 106

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            ALA  L         RI+DL TG+GA+ LAL +  P      VD S  AL   + N   
Sbjct: 107 WALAQPL-----SGSARIVDLCTGSGALALALAQGFPGATVFAVDDSDDALVYTRRNTAG 161

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             V   R D   +   + ++   D++VSNPPYI       L  EV + DP  +L GG DG
Sbjct: 162 TAVHVVRADVTDAGLLTELDRSVDLLVSNPPYIPDAAE--LEPEVAEHDPAHALYGGADG 219

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
           ++    +A   +R L   G C+VE   +     V +F     F  V A  D  G  R + 
Sbjct: 220 MAVIEHLAGVAARLLRPGGRCAVEHDDSTSQATVEVFVRAGGFTEVTARHDLTGRPRFVT 279

Query: 262 FCR 264
             R
Sbjct: 280 AVR 282


>gi|296128916|ref|YP_003636166.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas flavigena DSM 20109]
 gi|296020731|gb|ADG73967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas flavigena DSM 20109]
          Length = 304

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 105/229 (45%), Gaps = 11/229 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  I+G   F  V L +    F PRPETE +   A+  +     +     ++D
Sbjct: 68  RRRSREPLQHIVGHTVFRYVTLRVEPGVFVPRPETETVAQLAVDEAAAVAARGGSPLVVD 127

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD-----W 157
           L TGTGA+ +++  E    + V VD+S +A+ +A+ NA    V+ R    +Q D      
Sbjct: 128 LCTGTGAIAVSVDTEVAASRVVAVDLSDEAVGLARHNA--GAVASRALRVVQGDVRDPAL 185

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRH 216
            + ++G  DV+VSNPPYI    V  L  EVRD DP ++L  GG DGL   R +    +R 
Sbjct: 186 LAELDGTVDVVVSNPPYIPPDAV-PLDPEVRDHDPDLALYGGGSDGLDVPRAVIAAAARL 244

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           L   GL  +E    Q         +   F  V    D  G  R L+  R
Sbjct: 245 LAPGGLLVMEHAEVQDAQARAAAAATGAFEDVRTVPDLTGRPRTLVARR 293


>gi|206896464|ref|YP_002247174.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206739081|gb|ACI18159.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 266

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 16/257 (6%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           ++ +  V G+S   V +D D ++D+ +       I    ++     I G+  FY     +
Sbjct: 24  YNLISYVFGVSKIDVALDKDIIVDEGE---FRRVIYLLGENVPFAYITGYEAFYGRDFYV 80

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               F PR ETELLV+ AL        K      LD GTG+GA+ ++LL E+P  +GV V
Sbjct: 81  LPGVFIPRNETELLVELAL--------KEPFNSFLDFGTGSGAIAISLLLENPKSQGVAV 132

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +IS       K NA    V  R   + +       G+FD+I+SNPPY+   + + +   V
Sbjct: 133 EISHVGQLCTKYNAEKFEVQNRLAIVST---LPENGMFDLIISNPPYVAYELFEEVDYSV 189

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + F+P  ++    D +  +R I      HL+  G   +EI    + D+ ++  S   F  
Sbjct: 190 KAFEPLQAVFPE-DPVLVFRDILTYSLSHLSDAGRVILEIDSYVESDLQKLASSLG-FYY 247

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD    DR+ +  R
Sbjct: 248 QVTKDLSQFDRICILSR 264


>gi|189462017|ref|ZP_03010802.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136]
 gi|189431231|gb|EDV00216.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136]
          Length = 280

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 9/226 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R  ++E +  ILG  DF  +   ++     PRPET  L+D  ++        + 
Sbjct: 56  LEDILSRLKRYEPLQYILGKVDFCGLPFEVAPGALIPRPETAELIDWIIS----DYTDKA 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            VRILD+GTG+G + + L K+    K    D+S KAL+IA+ N + N V       Q D 
Sbjct: 112 GVRILDVGTGSGCIPIVLGKKLKQSKITSWDVSEKALDIARRNKLLNQVD--ITLAQVDI 169

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVS 214
           F +   +   DV+VSNPPYI       +   V D++P ++L     D L  YR IA+   
Sbjct: 170 FDTALPDIHVDVLVSNPPYITEKERSGMERNVLDWEPELALFVPDSDPLLFYRRIAEVGC 229

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             L   G    EI      + V++ E      V   KD  GNDR++
Sbjct: 230 DILVSGGTLYYEINRAYGKETVQLLEGMGYQSVELRKDMFGNDRMI 275


>gi|314934186|ref|ZP_07841547.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus caprae C87]
 gi|313653091|gb|EFS16852.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus caprae C87]
          Length = 278

 Score = 83.6 bits (205), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY     + ++   PRPETE      +   L +   +D V 
Sbjct: 59  ALHRMLSGEPIQYIVGFQSFYGYTFEVDNNCLIPRPETE----EVMLHFLNQCHHQDTVA 114

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             D+GTG+GA+ + L    P    +  D+    L +A++NA  +    +F  LQ D    
Sbjct: 115 --DIGTGSGAIAITLKLLKPDLNVLATDLYEDTLNVARNNATLHQQEIQF--LQGDALKP 170

Query: 161 V---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +       D ++SNPPYI+      +   V  ++P  +L    +G + Y  I   + + +
Sbjct: 171 LIDNNIKVDGLISNPPYIDECEARDMDDTVLKYEPHHALFAENEGYAIYEGILKDLPQVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262
            + G    EIGYNQ   +  +  S     LV   +D  GN+R++ F
Sbjct: 231 KEQGHVVFEIGYNQGNQLKALINSMYPDKLVKVIRDINGNERIVSF 276


>gi|226944463|ref|YP_002799536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Azotobacter vinelandii DJ]
 gi|226719390|gb|ACO78561.1| Modification methylase [Azotobacter vinelandii DJ]
          Length = 306

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 7/187 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L+    A  LP     +  RILDL TG+G + +
Sbjct: 88  LLGEAWFCGLPFLVDERVLVPRSPIAELIGQRFAPWLPH----EPTRILDLCTGSGCIGI 143

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E P  + V  D+S  ALE+A  N   + + ER  T+Q D F+ + G  FD+IVSNP
Sbjct: 144 ACAHEFPGAEVVLADLSFDALEVANRNIERHALDERVYTVQGDGFAGLPGQRFDLIVSNP 203

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E R  +P + L  G DGL   R +    + HL + G+  VE+G N +
Sbjct: 204 PYVDAEDFADMPEEYR-HEPAMGLACGEDGLDLVRRMLAEAADHLTERGVLIVEVG-NSQ 261

Query: 233 VDVVRIF 239
           V V  ++
Sbjct: 262 VHVETLY 268


>gi|124002114|ref|ZP_01686968.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134]
 gi|123992580|gb|EAY31925.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134]
          Length = 288

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 9/227 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L NA+ R  ++E I  I    +FY +   +      PRPETE LV    A+ +   + + 
Sbjct: 60  LDNALRRLQQYEPIQYITKQAEFYGLPFRVKPGVLIPRPETEELV----AWIIQDFQSQP 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154
           +  +LD+GTG+G + + L K  P  +   +D+S +AL IA+ NA  N V+ ++   + L 
Sbjct: 116 LT-LLDIGTGSGCIAVTLAKNMPQAQVNALDVSNEALTIAQQNAALNKVNIQWIAHNILA 174

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGV 213
             +    +   DVIVSNPPY+       +   V   +P ++L     + L  Y  I    
Sbjct: 175 PSFTHFADQSLDVIVSNPPYVTPAEQAQMHENVLKHEPALALFVPQNEPLLFYEAITQVA 234

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            + L   G    EI         ++ E +    V   KD  G DR++
Sbjct: 235 RQKLKPQGALYFEINEQFGAITKKMIEQQGFQEVEVRKDLFGKDRMV 281


>gi|329943004|ref|ZP_08291778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlamydophila psittaci Cal10]
 gi|332287586|ref|YP_004422487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|313848160|emb|CBY17161.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506596|gb|ADZ18234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|328814551|gb|EGF84541.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlamydophila psittaci Cal10]
 gi|328914837|gb|AEB55670.1| HemK protein [Chlamydophila psittaci 6BC]
          Length = 283

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 96/209 (45%), Gaps = 6/209 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F  + L + S    PR ETELL +  + +     +   +    D+  G+G + L
Sbjct: 71  IHGSVRFLELDLEVDSRVLIPRMETELLAEKIIQY---LTQHSHIQTFYDVCCGSGCLGL 127

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           ++ K  P  K V  DI  KA+ +AK NA  N +  + D L+ D F+      D  V NPP
Sbjct: 128 SIKKYCPNVKVVLSDICPKAVAVAKINASKNNL--KVDVLEGDLFAPFSCPADAFVCNPP 185

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+    +     EVR  +P  +L GG  GL  Y  IA  +   L+  G+  +EIGY Q  
Sbjct: 186 YLSFDEIMRTDPEVRCHEPWKALVGGSSGLEFYERIARDLDAVLHPGGVGWLEIGYRQGE 245

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            V RIF +  +   +  +D    DR+   
Sbjct: 246 AVKRIFANHGV-CGSIHQDLSACDRIFFL 273


>gi|289663510|ref|ZP_06485091.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 281

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 7/222 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           ++ R    E +  + G R F+ + L +S  T  PR +TELLV+     +L R + R   R
Sbjct: 60  SVQRREAGEPVAYLTGSRGFWTLDLAVSPATLIPRADTELLVE----LALERFDTRPGRR 115

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA  + +    D     WF  
Sbjct: 116 AADLGTGSGAIALAISSERPQAQVIATDASAAALAMARRNAHKHDL-RNVDFRLGHWFGP 174

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + G  FD+I SNPPYI +        ++R ++P  +L  G DGL   R I      HL  
Sbjct: 175 LAGEAFDLIASNPPYIAAHDPHLQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLP 233

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G   +E G++Q   V  +  +     V  ++D    DRV L
Sbjct: 234 SGWLLLEHGWDQGAVVRALLAAAGFDTVATYRDLEARDRVTL 275


>gi|148269572|ref|YP_001244032.1| HemK family modification methylase [Thermotoga petrophila RKU-1]
 gi|147735116|gb|ABQ46456.1| modification methylase, HemK family [Thermotoga petrophila RKU-1]
          Length = 282

 Score = 83.2 bits (204), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 114/220 (51%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  + L +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 79  LHYILGEKEFMGLSLLVEEGVFVPRPETEELVELALE----LIRKYGIKAVADIGTGSGA 134

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+E+A+ NA  +GVS+RF   + +     +  F   ++
Sbjct: 135 IGVSVAKFSDVVV-FATDVSSKAVEVARKNAERHGVSDRFFVRKGELLEPFKEKFASIEM 193

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 194 ILSNPPYVKSSAHLPKDVL------FEPAEALFGGEDGLDFYREF---FGRYNTSGKIVL 244

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +EIG +Q  ++ +I  S  +FL    KD  G  R L   R
Sbjct: 245 MEIGEDQVEELKKIV-SDAVFL----KDSAGKYRFLFLNR 279


>gi|27382585|ref|NP_774114.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium japonicum USDA 110]
 gi|27355757|dbj|BAC52739.1| hypothetical adenine-specific methylase [Bradyrhizobium japonicum
           USDA 110]
          Length = 319

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 6/139 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F       VDIS  ALE+A  N   +G+ ER    + 
Sbjct: 153 VERVLDLCTGSG--CLAILAAYHFPNATVDAVDISKGALEVAARNVGEHGLDERVTLHRG 210

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F+ + +  +D+I++NPPY+++  +  L  E R  +P+++ DGG+DGL   R I     
Sbjct: 211 DLFAPLGDNRYDLIITNPPYVDAEGMAALPPECR-AEPKLAFDGGVDGLDVVRRILRDAP 269

Query: 215 RHLNKDGLCSVEIGYNQKV 233
            HL  DG    EIG  +++
Sbjct: 270 EHLTPDGGLICEIGRGREL 288


>gi|120611152|ref|YP_970830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acidovorax citrulli AAC00-1]
 gi|120589616|gb|ABM33056.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Acidovorax citrulli AAC00-1]
          Length = 309

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG G++ +      P  +  G D+S  AL++A+ N   +G+  R     SD  S+
Sbjct: 139 VLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSA 198

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +D+I+ NPPY+ +  +  L  E R  +P ++L GG DG+   R +       L +D
Sbjct: 199 VPGPWDLILCNPPYVNAASMAALPQEYR-AEPELALAGGADGMDFVRRLLADAPAALRED 257

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G+  +EIG N++      F     F     +   G D+VLL  R
Sbjct: 258 GVLILEIG-NERAHFEAAFPHLPAFW---LETSAGEDQVLLLTR 297


>gi|254821299|ref|ZP_05226300.1| modification methylase, HemK family protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 308

 Score = 83.2 bits (204), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 107/231 (46%), Gaps = 13/231 (5%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           +A+    +   +  +LG   F  V+L +    F PRPETE L++ A A    R+  R V 
Sbjct: 64  DAVAVRSRRVPLQHLLGTAAFGPVQLRVGPGVFIPRPETEALLEWARAQ---RLAPRPV- 119

Query: 100 RILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154
            I+DL TG+GA+ +AL  +        + V +D S  ALE A+ NA    +   R D  +
Sbjct: 120 -IVDLCTGSGALAVALAHQRAELGQEARIVALDNSDAALEYARGNAEGTAIEIVRADVTE 178

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                 ++G  D+IV+NPPY+    V  L  EV   DP  ++ GG DGL+    I     
Sbjct: 179 PGVLPQLDGRVDLIVANPPYVPDGAV--LDPEVAQHDPYQAVFGGPDGLAVIAPIVRLAG 236

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           R L   GL  +E       + + +F    LF  V A +D  G  R +   R
Sbjct: 237 RWLRPGGLIGIEHDDTTSRETMELFVRTGLFEDVQARQDLTGRPRFVTARR 287


>gi|223043926|ref|ZP_03613967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus capitis SK14]
 gi|222442641|gb|EEE48745.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus capitis SK14]
          Length = 278

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 105/226 (46%), Gaps = 12/226 (5%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           A+ R L  E I  I+G++ FY     + ++   PRPETE      +   L +   +D V 
Sbjct: 59  ALHRMLSGEPIQYIVGFQSFYGYTFEVDNNCLIPRPETE----EVMLHFLNQCHHQDTVA 114

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             D+GTG+GA+ + L    P    +  D+    L +A++NA  +    +F  LQ D    
Sbjct: 115 --DIGTGSGAIAITLKLLKPDLNVLATDLYEDTLNVARNNATLHQQEIQF--LQGDALKP 170

Query: 161 V---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +   +   D ++SNPPYI+      +   V  ++P  +L    +G + Y  I   + + +
Sbjct: 171 LIDNDIKVDGLISNPPYIDEGEARDMDDTVLKYEPHHALFAENEGYAIYEGILKDLPQVM 230

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262
            + G    EIGYNQ   +  +  S     LV   +D  GN+R++ F
Sbjct: 231 KEQGHVVFEIGYNQGNQLKALINSMYPDKLVKVIRDINGNERIVSF 276


>gi|110003949|emb|CAK98289.1| putative s-adenosyl-methionine-dependent methyltransferase protein
           [Spiroplasma citri]
          Length = 291

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETE-------LLVDSALAFSLPRIEKRDVVRI 101
           + I  I   ++FY     +  +   PR ETE       +++D     +  +      + +
Sbjct: 67  KPIQHITNLQNFYGYDFYVDYNVLIPRYETEELVDNINIIIDEMFLNNCNKRNCNKRLTL 126

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---F 158
           +D+GTG+GA+ ++L  E+P       DIS +AL++AK N +     +    L+ D    F
Sbjct: 127 IDIGTGSGAIAISLGLENPNLTIYASDISIEALKVAKRN-IKQLNCKNVKLLEGDMLEPF 185

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +   D++V NPPYI +     +   V++++P ++L G  DGL  YR I     + + 
Sbjct: 186 IKNKIKADLLVCNPPYIPNN--QKISHHVKNYEPHVALFGDADGLYFYREIFQNWQKVVK 243

Query: 219 KDGLCSVEIGYNQKVDVVRI 238
           K+G+   E GY+QK D+ ++
Sbjct: 244 KNGILCFEHGYDQKKDLEKL 263


>gi|294340107|emb|CAZ88478.1| putative S-adenosyl-L-methionine-dependent methyltransferases
           /Modification methylase HemK [Thiomonas sp. 3As]
          Length = 324

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 19/241 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +S H     P   L   Q   L   I R +  E I  + GW+ F  + L  S +   PR 
Sbjct: 65  MSLHAAAETPLVALSAAQLEALDGLIERRVAGEPIAYLTGWQRFMGLELRASPEALIPRA 124

Query: 77  ETELLVDSAL--------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           E+ELL   A         A + P I       ++D+  G+G + LAL    P  +  G D
Sbjct: 125 ESELLGQIAAQKLRSMAEAAATPPI-------VIDVCCGSGNLALALAHAVPQAQVHGAD 177

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184
           IS  A+++A++N     + +R      D  +      +G  D++VS PPYI +  +D + 
Sbjct: 178 ISQTAIDLARANTQNLDLGQRVSLHTGDLLAPFGAEFQGKVDLVVSLPPYISTAKLDTMP 237

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E+   +P ++ DGG  G+     +       L   G   +E+G  Q   ++++ E    
Sbjct: 238 HEIVGHEPHLAFDGGPFGVRILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQLLEKHPA 297

Query: 245 F 245
           +
Sbjct: 298 Y 298


>gi|330876113|gb|EGH10262.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 302

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G N +
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259

Query: 233 VDVVRIFESRKLFLVNAFKDYG 254
           V V  ++       +N FK  G
Sbjct: 260 VHVQALYPEVDFAWLN-FKRGG 280


>gi|119714686|ref|YP_921651.1| HemK family modification methylase [Nocardioides sp. JS614]
 gi|119535347|gb|ABL79964.1| modification methylase, HemK family [Nocardioides sp. JS614]
          Length = 299

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 12/197 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +  E + ++LG+ +F  +R+ +    F PR  T LL   A+      +E  D
Sbjct: 50  LAAMVARRVAGEPLEQVLGFAEFLGLRVAVEPGVFVPRLRTTLLARRAIRA----LEPGD 105

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQS 155
           +   +DL  GTGA+ +ALL   P  +    DI   A+  A+ N   + V E   +D L  
Sbjct: 106 LA--VDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDALPG 163

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    + G   V+V+N PY+ +  +  +  E RD + R++LDGG DGL   R +  G   
Sbjct: 164 E----LRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARP 219

Query: 216 HLNKDGLCSVEIGYNQK 232
            L   G   VE    Q+
Sbjct: 220 WLAPGGRVLVETSAAQR 236


>gi|92118609|ref|YP_578338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrobacter hamburgensis X14]
 gi|91801503|gb|ABE63878.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 343

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F        D+S  AL +A+ N   + + +R    Q 
Sbjct: 165 VTRVLDLCTGSG--CLAILAARAFPNATVDAADLSADALTVAERNVQEHRLEDRIQLAQG 222

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F++V G  +D+I+SNPPY+++  +  L  E    +PR++ DGG DG+   R I DG  
Sbjct: 223 DLFAAVSGKRYDLIISNPPYVDAQGMASLPHECL-AEPRMAFDGGADGIDLVRRIIDGAK 281

Query: 215 RHLNKDGLCSVEIG 228
            HL   G    E+G
Sbjct: 282 THLASGGGLLCEVG 295


>gi|33241450|ref|NP_876391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae TW-183]
 gi|33235958|gb|AAP98048.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae TW-183]
          Length = 296

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G   F  +RL + S    PR ETELL +  + + L   E   +    D+  G+G + LA+
Sbjct: 82  GAVSFLGLRLRVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAI 138

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K  P  + V  D+  +A+ +A  NA +NG+  +   L  D  +      D  V NPPY+
Sbjct: 139 KKSCPHVEVVLSDVCPQAVAVANENAKSNGLDVKI--LLGDLSAPYTRPADAFVCNPPYL 196

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  +  EVR ++P  +L GG  GL  Y+ IA  + + +   G+  +EIG +Q   +
Sbjct: 197 SFNEIIHIDPEVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESI 256

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262
             IF    ++     +D  G DR+   
Sbjct: 257 KNIFSKHGIY-GRLHQDLSGRDRIFFL 282


>gi|115522953|ref|YP_779864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisA53]
 gi|115516900|gb|ABJ04884.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisA53]
          Length = 340

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 6/139 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V  +LDL TG+G  CLA+L    F       VD+S  AL +A  N   +G+ +R      
Sbjct: 175 VENVLDLCTGSG--CLAILASRHFHNAHVDAVDLSKDALAVAARNVAEHGLDDRIALHHG 232

Query: 156 DWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F+ ++G++ D+I+SNPPY+++  +  L  E R  +P+++ DGG DGL   R I DG  
Sbjct: 233 DLFAPLQGMYYDLIISNPPYVDAEGMAGLPPECR-AEPKMAFDGGEDGLDIVRRILDGAR 291

Query: 215 RHLNKDGLCSVEIGYNQKV 233
            HL   G    EIG  ++ 
Sbjct: 292 MHLQPHGGLLCEIGRGREA 310


>gi|212635903|ref|YP_002312428.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella piezotolerans WP3]
 gi|212557387|gb|ACJ29841.1| Modification methylase HemK [Shewanella piezotolerans WP3]
          Length = 314

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 12/194 (6%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+ +    FS P +  + V R++DL TG+G + +A   E    +   +DIS  
Sbjct: 113 PRSPIAELIANR---FS-PWLYNKQVNRVMDLCTGSGCIAIACAYEFEDAEVDALDISDD 168

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           ALE+A+ N  T GV +R   ++SD FS++     +D+IVSNPPY+++  +  +  E    
Sbjct: 169 ALEVAQINIETLGVMDRVFPMESDLFSAIPKGPQYDLIVSNPPYVDAEDIGDMPDEYH-H 227

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P I L  G DGL   + I    + +L +DGL  VE+G N  V ++  F     F   +F
Sbjct: 228 EPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHIIEQFPDVP-FTWASF 285

Query: 251 KDYGGNDRVLLFCR 264
           ++  G D V +  R
Sbjct: 286 EN--GGDGVFILSR 297


>gi|326317535|ref|YP_004235207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374371|gb|ADX46640.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 309

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG G++ +      P  +  G D+S  AL++A+ N   +G+  R     SD  S+
Sbjct: 139 VLDLCTGNGSLAVLAAMAYPDVRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSA 198

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +D+I+ NPPY+ +  +  L  E R  +P ++L GG DG+   R +       L +D
Sbjct: 199 VPGPWDLILCNPPYVNAASMAALPQEYR-AEPELALAGGADGMDFVRRLLADAPAALRED 257

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G+  +EIG N++      F     F     +   G D+VLL  R
Sbjct: 258 GVLILEIG-NERAHFEAAFPHLPAFW---LETSAGEDQVLLLTR 297


>gi|88860367|ref|ZP_01135005.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas tunicata D2]
 gi|88817565|gb|EAR27382.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas tunicata D2]
          Length = 311

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 3/156 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E + V RILD+ TG+  + +AL ++    +   VDIS  AL++A  N     V +R   +
Sbjct: 136 EDQAVHRILDMCTGSACIAIALAEKFDDAQVDAVDISTDALDVADINISDYQVEDRVFPI 195

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           QSD FS V G  +D+I++NPPY+++  +  L  E    +P + L  G+DGL   R I  G
Sbjct: 196 QSDVFSGVIGQKYDLIIANPPYVDAEDMADLPNEFH-HEPELGLASGVDGLDVTRRILAG 254

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            + HLN +GL  VE+G N  V +  I+ + +   ++
Sbjct: 255 AAEHLNDNGLLFVEVG-NSMVHMEDIYPNAEFEWID 289


>gi|320538354|ref|ZP_08038232.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis
           F0421]
 gi|320144798|gb|EFW36536.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis
           F0421]
          Length = 300

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 22/270 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS   L  + G     ++  PD+ +   Q  F  N I +      +  + G +DF+    
Sbjct: 33  DSDVLLSSLLGKERSWLLAHPDADVSAIQSSF-KNLIEKRCSGIPVAYLTGKKDFFQSSF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     P+P+TELLV+  L     R      + +L+  TG+G V +++LKE    + +
Sbjct: 92  YVTPAVLIPKPDTELLVEQTLEAIRER-SNSSPLSLLEPCTGSGCVVISVLKE---LEKI 147

Query: 126 GV--------DISCKALEIAKSNAVTNGVSERFDTLQS-------DWFSSVEGLFDVIVS 170
           G+        DIS +AL +AK NA  N +S +   L S       + FS +   +D+I S
Sbjct: 148 GITNITTSAFDISNEALAVAKKNA-ENLLSPKMRDLLSFFRFNLQESFSRLGTAYDIIFS 206

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPY+ + +   L  + R  +P I+LDGG +GL   + +A+     L ++G+   E+   
Sbjct: 207 NPPYVPTEMARLLLQDGRK-EPFIALDGGAEGLDFIQALANNSYVVLKRNGMLLSEVDEY 265

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                  I        V   KD+   DR++
Sbjct: 266 HANQAADILIKAGFSSVTIHKDFNLQDRLV 295


>gi|224073134|ref|XP_002303988.1| predicted protein [Populus trichocarpa]
 gi|222841420|gb|EEE78967.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 22/211 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L++      PRPETEL+VD  ++ ++   ++       D+GTG+GA+ + + 
Sbjct: 148 WRDLV---LSVQEGVLIPRPETELIVD-LVSDAVSNNQELGQGLWADVGTGSGAIAIGIS 203

Query: 117 K-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP 172
           K    + + +  D+S  A+ +A  N    G+    +  Q  WF     VEG    IVSNP
Sbjct: 204 KILRSYGRVIATDLSPVAVSVAMFNVQRYGLQHVTEVRQGSWFEPLKDVEGQLVGIVSNP 263

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  EV   +PR++LDGG  G+ +   + +G +  L   G  + E    ++
Sbjct: 264 PYIPSDNISGLQAEVGRHEPRLALDGGASGIDYLLHLCNGAAAMLKPGGFFAFETNGEKQ 323

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
                       FLV    DY  ND    FC
Sbjct: 324 CK----------FLV----DYMQNDIAGSFC 340


>gi|15618038|ref|NP_224322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae CWL029]
 gi|15835650|ref|NP_300174.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae J138]
 gi|16752930|ref|NP_445201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae AR39]
 gi|4376377|gb|AAD18267.1| A/G specific methylase [Chlamydophila pneumoniae CWL029]
 gi|8163474|gb|AAF73693.1| modification methylase, HemK family [Chlamydophila pneumoniae AR39]
 gi|8978488|dbj|BAA98325.1| A/G specific methylase [Chlamydophila pneumoniae J138]
 gi|269302995|gb|ACZ33095.1| methyltransferase, HemK family [Chlamydophila pneumoniae LPCoLN]
          Length = 288

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G   F  +RL + S    PR ETELL +  + + L   E   +    D+  G+G + LA+
Sbjct: 74  GAVSFLGLRLRVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAI 130

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K  P  + V  D+  +A+ +A  NA +NG+  +   L  D  +      D  V NPPY+
Sbjct: 131 KKSCPHVEVVLSDVCPQAVAVANENAKSNGLDVKI--LLGDLSAPYTRPADAFVCNPPYL 188

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  +  EVR ++P  +L GG  GL  Y+ IA  + + +   G+  +EIG +Q   +
Sbjct: 189 SFNEIIHIDPEVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESI 248

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262
             IF    ++     +D  G DR+   
Sbjct: 249 KNIFSKHGIY-GRLHQDLSGRDRIFFL 274


>gi|291294531|ref|YP_003505929.1| modification methylase HemK family [Meiothermus ruber DSM 1279]
 gi|290469490|gb|ADD26909.1| modification methylase, HemK family [Meiothermus ruber DSM 1279]
          Length = 307

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 8/183 (4%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L    +  +LG  +FY +RL ++     PRPETE LV+ AL      +       +LD+G
Sbjct: 67  LSGHPLQLLLGESEFYGLRLKVARGVLIPRPETEGLVERALT----HLPLDAPAWVLDVG 122

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+ LA+    P       DI+ KALE+AK NA+  G+   F  L++ + +++ GL 
Sbjct: 123 TGSGAIALAIKAMRPQATVWATDINPKALELAKENALHLGLEVSF--LEAPFTANLTGL- 179

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+++SNPPY+     +    E+   D R +L  G +GL   R +       L   G   +
Sbjct: 180 DLVISNPPYLPESYREEAPPELAYEDER-ALYAGPEGLDVARALLPQAWDALQPGGWLWL 238

Query: 226 EIG 228
           E+ 
Sbjct: 239 ELA 241


>gi|71280281|ref|YP_269848.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Colwellia psychrerythraea 34H]
 gi|71146021|gb|AAZ26494.1| modification methylase, HemK family [Colwellia psychrerythraea 34H]
          Length = 314

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 2/139 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+    RILDL TG+G + +A     P  +   VD+S  AL +A+ N   +G+SE+   +
Sbjct: 131 EQNPPQRILDLCTGSGCIAIACASYFPDAEVDAVDLSLDALNVAEINIENHGLSEQVIPI 190

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           QSD FS V    +D+IV+NPPY++   +D L  E    +P + L  G DGL   R I   
Sbjct: 191 QSDVFSGVTAQKYDLIVTNPPYVDQEDIDSLPAEFT-HEPEMGLGCGEDGLDIVRIILAE 249

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
            + +LN DG+   E+G +Q
Sbjct: 250 SALYLNDDGVLICEVGNSQ 268


>gi|254458489|ref|ZP_05071914.1| modification methylase HemK [Campylobacterales bacterium GD 1]
 gi|207084797|gb|EDZ62084.1| modification methylase HemK [Campylobacterales bacterium GD 1]
          Length = 276

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 10/222 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R  K+E +  I     FY+    ++     PRPETELL+D  L  + P  + + 
Sbjct: 58  LYEWVERRAKNEPLEYITNSVSFYSQEFFIAPGALIPRPETELLIDDVLK-NFPDTDAK- 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +  +++G G+G + + L +     K + VDIS  AL IAK+N     +  R +      
Sbjct: 116 -MTFIEVGIGSGIISIVLAQHYKNAKFIAVDISPAALIIAKANIEKFEMQNRIELRLGSL 174

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV-SRH 216
              V+   D +VSNPPYI + I+    L    ++P+ +L GG  G    + + D V  R+
Sbjct: 175 LEPVDEHIDYLVSNPPYIANEILLESNL---SYEPQNALFGGNIGDEIIQNLLDEVLKRN 231

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +N     + EIGY+QK  +    ++     +  +KDY   DR
Sbjct: 232 IN---FFTCEIGYDQKDRIRDYLKNTDFDSLEFYKDYSDFDR 270


>gi|203287655|ref|YP_002222670.1| HemK family methylase [Borrelia recurrentis A1]
 gi|201084875|gb|ACH94449.1| HemK family methylase [Borrelia recurrentis A1]
          Length = 277

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 20/219 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH ILG ++F  ++  ++     PR +TE LV+ AL     +I+K ++ +ILDL  G+G 
Sbjct: 64  IHYILGTKEFMGIKFYINKHVLIPRDDTECLVEEALI----QIKKNNLSKILDLCCGSGC 119

Query: 111 VCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L +   LK+    K    DIS +AL+++  N     ++   +  +S+    +   F++
Sbjct: 120 IGLTIAYYLKQ----KVTLADISAQALKVSLKNTQRLNLTNHIEIKRSNLLKYIGKKFEL 175

Query: 168 IVSNPPYI---ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+   E  I + L  E     PRI+L G G DGL   + I       L K+GL 
Sbjct: 176 IITNPPYLTKDELRIKEKLAKE-----PRIALLGFGQDGLKIAKKIIKQAKYKLTKNGLL 230

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +E+   QK  + +         +    D    +R LL 
Sbjct: 231 ILEMAPWQKKSLEKFAIQEGFTYLKTIYDIENRERALLL 269


>gi|295839269|ref|ZP_06826202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
 gi|295827385|gb|EDY42652.2| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
          Length = 261

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 5/204 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  ++G   F  +R+ +    F PR  +E LV    A +L  +  R  V +
Sbjct: 39  VERRVAGEPLEYVVGHAVFRGLRIEVGPGVFVPRGRSEFLV----ARALDGVRARGAVTL 94

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL  G+GA+ LAL     P       D+   AL  A+ N    G       L +    +
Sbjct: 95  LDLCCGSGALGLALRTALGPRATLHAADLDPGALRWARRNLAPVGAHVYEGDLYAPLPPA 154

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+ +N PY+ S  V  L  E R  +P ++LDGG DGL   R +A   +  L  +
Sbjct: 155 LRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLLALDGGADGLDLVRRVAREATAWLAPN 214

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G   +E G  Q  +V  IF +  L
Sbjct: 215 GRLLIESGDRQAPEVAAIFTTAGL 238


>gi|296135886|ref|YP_003643128.1| modification methylase, HemK family [Thiomonas intermedia K12]
 gi|295796008|gb|ADG30798.1| modification methylase, HemK family [Thiomonas intermedia K12]
          Length = 324

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 19/241 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +S H     P   L   Q   L   I R +  E I  + GW+ F  + L  S +   PR 
Sbjct: 65  MSLHAAAETPLVALSAAQLETLDRLIERRVAGEPIAYLTGWQRFMGLELRASPEALIPRA 124

Query: 77  ETELLVDSAL--------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           E+ELL   A         A + P I       ++D+  G+G + LAL    P  +  G D
Sbjct: 125 ESELLGQIAAQKLRSMAEATATPPI-------VIDVCCGSGNLALALAHAVPQAQVHGAD 177

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184
           IS  A+++A++N     + +R      D  +      +G  D++VS PPYI +  +D + 
Sbjct: 178 ISQTAIDLARANTQNLDLGQRVSLHTGDLLAPFGAEFQGKVDLVVSLPPYISTAKMDTMP 237

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E+   +P ++ DGG  G+     +       L   G   +E+G  Q   ++++ E    
Sbjct: 238 HEIVGHEPHLAFDGGPFGVRILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQLLEKHPA 297

Query: 245 F 245
           +
Sbjct: 298 Y 298


>gi|295103956|emb|CBL01500.1| HemK family putative methylases [Faecalibacterium prausnitzii
           SL3/3]
          Length = 323

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 110/277 (39%), Gaps = 47/277 (16%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L   Q   L     R    E +  + G   F +  L +      PR +TE++  +A 
Sbjct: 47  DCPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFLDFELAVGPGVLCPRADTEVVAQAA- 105

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141
           A +L  IE     R+LDL  GTG + L + +  P  +   V+ S  A    + NA     
Sbjct: 106 AETLAGIES---PRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPAAFTYLEKNARCALT 162

Query: 142 ----VTNGVSERFDTLQSD---------------------------------WFSSVEGL 164
                T  V E     Q+D                                 W +  EG 
Sbjct: 163 GQGRQTENVLEPSALEQADAPALDWGPALNALRAGKKPVYAVQPVQGDLFTYWETLPEGQ 222

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            ++IVSNPPY+ +  ++ L  EV   +P ++L+ G DGL  YR +A      L   G   
Sbjct: 223 LELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAGEDGLVFYRALAQHYQNALCPGGALV 281

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +EIG+ Q+  V  +        +   +D+GGNDR ++
Sbjct: 282 LEIGWQQREAVSALLAENGWADIRCIQDFGGNDRCVI 318


>gi|212712228|ref|ZP_03320356.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
           30120]
 gi|212684974|gb|EEB44502.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
           30120]
          Length = 310

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A   E P  +   VDIS   L + + N   +G+  R   ++SD F  
Sbjct: 136 ILDLCTGSGCIAIACAYEFPEAEVDAVDISTDVLAVTEQNIANHGLEHRVIPIRSDLFRD 195

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E  +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R I     R LN+
Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPQEFR-VEPELALAAGSDGLKLVRRILANAPRFLNE 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           DG+   E+G N  V ++  +       ++   ++GG D V +  R
Sbjct: 255 DGILVCEVG-NSMVHLIEQYPDIPFIWLDF--EFGG-DGVFMLTR 295


>gi|148272338|ref|YP_001221899.1| putative methylase of peptide chain release factors [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830268|emb|CAN01202.1| putative methylase of peptide chain release factors [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 291

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 95/202 (47%), Gaps = 13/202 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  + E +  I G   F ++ L +    F PRPETE +  + LA         +    +
Sbjct: 72  ARRARREPLQHITGVAHFRSLELLVGPGVFVPRPETEHV--AQLAIDALTAAPGEAPVAV 129

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFS 159
           DLGTG+GA+ LAL  E P  +   +++S +A      N     ++   D +    +D F 
Sbjct: 130 DLGTGSGALALALATEVPHARVHAIEVSPEAHAWTARN--VERLAPHVDLVLGDLADAFP 187

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++G   V+VSNPPYI +   D +    EVR  DP ++L GG DGL   R ++    R L
Sbjct: 188 GLDGTVSVVVSNPPYIPA---DAIPRDPEVRLHDPALALYGGADGLDVVRLVSTTARRLL 244

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
           +  G   +E G  Q  D +R  
Sbjct: 245 HPGGALVIEHGELQG-DAIRAL 265


>gi|330964612|gb|EGH64872.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 302

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ 259


>gi|153808976|ref|ZP_01961644.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185]
 gi|149128309|gb|EDM19528.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185]
          Length = 278

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 10/252 (3%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F   +  ++   
Sbjct: 30  CDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRKFKVAPGV 89

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPET  LV+  +       E      +LD+GTG+G + ++L +  P  +    D+S 
Sbjct: 90  LIPRPETAELVELIVK------ENPGARHLLDIGTGSGCIAISLDQNLPDAEVEAWDVSE 143

Query: 132 KALEIAKSN--AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +AL IA  N   +   V  R   + SD   +    +DVIVSNPPYI       +   V D
Sbjct: 144 EALAIASENNKELDARVMFRRRDVLSDELGAT-SCYDVIVSNPPYITEAEKQDMEANVLD 202

Query: 190 FDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L     D L  YR IA      L   G    EI      +   I E  +   V 
Sbjct: 203 WEPGLALFVPDDDPLRFYRRIARLGCDLLLPGGKLYFEINQAYGRETAHILEMNQYRDVR 262

Query: 249 AFKDYGGNDRVL 260
             KD  G DR++
Sbjct: 263 VIKDIFGKDRIV 274


>gi|324999417|ref|ZP_08120529.1| modification methylase, HemK family protein [Pseudonocardia sp. P1]
          Length = 251

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 16/211 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +  E +  +LGW  F   R+ ++   F PR  TE LV +A+A   P      
Sbjct: 32  LDDLVRRRVAGEPLEHVLGWAAFDGARVRVAPGVFVPRRRTEALVHAAVAGLGPG----- 86

Query: 98  VVRILDLGTGTGAVCLALLKESPF-FKGVGVD---ISCKALEIAKSNAVTNGVSERFDTL 153
              ++DL  G GAV  A+ +  P       VD    +C A  +     V  G  + F  L
Sbjct: 87  -AVVVDLCCGCGAVGAAIARRVPVELHAADVDPVATACAATNLDGLGTVHTG--DLFAAL 143

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +    ++ G   V+V+N PY+ +  +  +  E RD +PR++LDGG DGL   R IA G 
Sbjct: 144 PA----TLRGRVAVLVANTPYVPAGAIAGMPPEARDHEPRVALDGGGDGLDPARRIAAGA 199

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L   G   +E    Q   +  +F    L
Sbjct: 200 PGWLAPGGTLLIETSAAQAPLLADVFAGHGL 230


>gi|260219431|emb|CBA26276.1| Uncharacterized adenine-specific methylase NMA1912 [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 300

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            ELLVD ++ + L    K     +LDL TG G++ +      P  +  G DIS  AL +A
Sbjct: 109 AELLVDGSIDYWL----KESTHHVLDLCTGNGSLGILATMVYPDVEVTGADISADALAVA 164

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N   + +  R   L+SD   ++ G+FD+++ NPPY+ +  +  L  E    +P I+LD
Sbjct: 165 RVNVDKHRLQNRMKLLESDGLKAIPGVFDLVLCNPPYVNAKSMAALPAEYL-AEPFIALD 223

Query: 198 GGI-----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           G       DG+   RT+  G+   L+ DG+  +EIG  ++       E   ++L    + 
Sbjct: 224 GNQAGGSGDGMDFIRTLLAGLPPKLSDDGVLVLEIGNEREYFEAAFPELEVVWL----ET 279

Query: 253 YGGNDRVLLFCR 264
             G D+VLL  R
Sbjct: 280 SAGEDQVLLLTR 291


>gi|296139487|ref|YP_003646730.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
 gi|296027621|gb|ADG78391.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
          Length = 245

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 22/208 (10%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R    E +  +LGW +F   RL++    F PR  TELL + A        E R 
Sbjct: 31  LEDLVRRRCSGEPLEHLLGWAEFRGTRLSVGPGAFVPRRRTELLAELA-------DEARP 83

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            V +++L  G   +      +  +     VDI    L  A+ NA +  V      L  D 
Sbjct: 84  SV-LVELCCGVAPIASTCTADEVY----AVDIDPVPLVYARENAPSATV------LAGDL 132

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F+ +     G  DVI +N PY+ S  +  +  E RD +PR +LDGG DGL+ +R IA   
Sbjct: 133 FAPLPRDLCGRTDVIAANAPYVPSAAIATMPAEARDHEPRAALDGGPDGLALHRRIAAEA 192

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241
              L + G+  +E G  Q     R+  +
Sbjct: 193 RMWLAEGGVVLIETGRYQAEYTERLLRA 220


>gi|213967483|ref|ZP_03395631.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato T1]
 gi|301386444|ref|ZP_07234862.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato Max13]
 gi|302058664|ref|ZP_07250205.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato K40]
 gi|302131200|ref|ZP_07257190.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927784|gb|EEB61331.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato T1]
 gi|331016925|gb|EGH96981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 302

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 91/179 (50%), Gaps = 6/179 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACADEFPDAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ 259


>gi|167762047|ref|ZP_02434174.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
           43183]
 gi|167700139|gb|EDS16718.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
           43183]
          Length = 303

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 16/259 (6%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C + G ++    +  D +L  ++   L   + R    E I  + G   F      ++   
Sbjct: 55  CEMLGQTAVDYYLGKDMILSPKEMQDLDTILARLRNFEPIQYVQGTARFLERSYYVAPGV 114

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LV+  L       E     RILD+GTG+G + ++L K  P  K    DIS 
Sbjct: 115 LIPRPETEELVEVMLK------EVPSGARILDIGTGSGCIAISLSKMLPDAKVTAWDISD 168

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVR 188
            AL IA+ N      S  F  +Q D  + V G    +DVIVSNPPY+       +   V 
Sbjct: 169 TALRIARRNNEALQASVCF--VQRDVLAYVPGSGERYDVIVSNPPYVTESEKQEMERNVL 226

Query: 189 DFDPRISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           D++P  +L   D   D L  YR IA+     L   G    EI          +  ++   
Sbjct: 227 DWEPFSALFVPDN--DPLLFYRRIAELGKGMLASGGRLYFEINRAFGEATATMLRAQGYT 284

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR+++  R
Sbjct: 285 NLRVLKDISGNDRIVIAER 303


>gi|224532130|ref|ZP_03672762.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116]
 gi|224511595|gb|EEF82001.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116]
          Length = 273

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 14/201 (6%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L  R++    + I R  K   IH IL  ++F  +  +L+     PR +TE LV+ AL   
Sbjct: 43  LTKREKKLFFDQIDRIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLVEEALI-- 100

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +I++ D  +ILDL  G+G + L++   +   K +  DIS KAL+IA  N     + + 
Sbjct: 101 --QIQQNDFKKILDLCCGSGCIGLSIAYCTKK-KVILSDISIKALQIASKNTKKLKLEKF 157

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSH 205
            + + S+    ++   D+I++NPPY+         LE+++    +P  +L G G DGL+ 
Sbjct: 158 VEIIHSNLLKCIKVKLDIIITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNI 212

Query: 206 YRTIADGVSRHLNKDGLCSVE 226
            R I       LN +GL  +E
Sbjct: 213 SRKILSQAKEKLNPNGLIIIE 233


>gi|325273576|ref|ZP_08139802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
 gi|324101293|gb|EGB98913.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
          Length = 302

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D +L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCMLEDDERVRLQHLLKRRIEERVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RILDL TG+G + +      P  + V  D+S +ALE+A  N   +G
Sbjct: 118 FEPWL----ANEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R  T+Q D F+ + G  FD+I+SNPPY+++   D +  E    +P + L  G DGL 
Sbjct: 174 LDARVYTVQGDGFAGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL + GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|294790652|ref|ZP_06755810.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Scardovia inopinata F0304]
 gi|294458549|gb|EFG26902.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Scardovia inopinata F0304]
          Length = 333

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 119/253 (47%), Gaps = 26/253 (10%)

Query: 32  DRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           DRQ +  T A  ++R   HE +  I+G   F  + + L    F PRPETE LV   L + 
Sbjct: 86  DRQAYADTFAATVIRRSHHEPLQYIVGHAPFRYIDVALGPGVFIPRPETETLVSLGLDY- 144

Query: 90  LPRIEKRD---VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141
           L  +E+++      ++DL  G+G + L+LL E+   +   V+    AL   + NA     
Sbjct: 145 LAGLEQKNGELPFFVIDLCAGSGVIGLSLLTENKQTQVYAVEKDQAALVWTEKNARRICQ 204

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195
            +     R+  LQ+D      F+ V G  D++V+NPPY+ ES I +   +EVRD+DP  +
Sbjct: 205 SSMTDPSRYRLLQADATDPSAFTDVNGTMDLVVTNPPYVPESEIPE--QVEVRDYDPPQA 262

Query: 196 LDGG-IDGLSHYRTIADGVSRHLN--KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFK 251
           L GG  DGL   R     + R  N  K G C +      +   +R F S   F      K
Sbjct: 263 LYGGSSDGL---RIPEQIILRSFNLLKPGGCLILEHDPSQGSALRSFASDHGFCRAETVK 319

Query: 252 DYGGNDRVLLFCR 264
           D  G +R L   R
Sbjct: 320 DLNGRERFLTAFR 332


>gi|60593723|pdb|1VQ1|A Chain A, Crystal Structure Of N5-Glutamine Methyltransferase,
           Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At
           2.80 A Resolution
 gi|60593724|pdb|1VQ1|B Chain B, Crystal Structure Of N5-Glutamine Methyltransferase,
           Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At
           2.80 A Resolution
          Length = 294

 Score = 82.4 bits (202), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 25/220 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +H ILG ++F  +   +    F PRPETE LV+ AL      I K  +  + D+GTG+GA
Sbjct: 91  LHYILGEKEFXGLSFLVEEGVFVPRPETEELVELALE----LIRKYGIKTVADIGTGSGA 146

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DV 167
           + +++ K S        D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   + 
Sbjct: 147 IGVSVAKFSDAIV-FATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEX 205

Query: 168 IVSNPPYIES---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           I+SNPPY++S   +  D L      F+P  +L GG DGL  YR       R+     +  
Sbjct: 206 ILSNPPYVKSSAHLPKDVL------FEPPEALFGGEDGLDFYREF---FGRYDTSGKIVL 256

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            EIG +Q  ++ +I  S  +FL    KD  G  R LL  R
Sbjct: 257 XEIGEDQVEELKKIV-SDTVFL----KDSAGKYRFLLLNR 291


>gi|196003016|ref|XP_002111375.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens]
 gi|190585274|gb|EDV25342.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens]
          Length = 347

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 105/233 (45%), Gaps = 12/233 (5%)

Query: 34  QRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           Q+  L N +  + L    +  I+   DF  + L +    F PRPETE LVD         
Sbjct: 69  QQIQLFNKLCSKRLDRMPVQYIIREWDFRYITLKMQPPVFIPRPETEELVDLINLHEFHH 128

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD-----ISCKALEIAKSNAVTNGVS 147
             + + +  LD+  G+GA+ L+LL E+P    + +D     IS   L   + N  +  + 
Sbjct: 129 KRENESITFLDICCGSGAIGLSLLCENPQATCIAIDKDPNAISLTELNSQRLNLGSRMIV 188

Query: 148 ERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           E  D +++++   F   E + D IVSNPPYI S  +  L  E+  F+  ++LDGG DGL 
Sbjct: 189 EHLDVMKTEFHHGFGHDEAV-DFIVSNPPYIPSKQLASLQEEIISFESSLALDGGCDGLD 247

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNA-FKDYGG 255
             + I       L   G   +E+  N    +     +    F  +A FKDY  
Sbjct: 248 IVKQILHFARLCLKDKGKIWLEVDINHPEMIEHYLNTHDTDFTYDATFKDYTN 300


>gi|47459024|ref|YP_015886.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K]
 gi|47458352|gb|AAT27675.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K]
          Length = 236

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 17/238 (7%)

Query: 27  DSVLDDRQRFFLTNAIV-RSLK----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           + +L +++R+ L   I  + LK    +  I +I+G+ +  NV + ++     PR ETE L
Sbjct: 5   EDLLKEKRRYKLKEEISEKELKMLNLNFPIQKIMGFIEMQNVIVHVNHFVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +  A  +    +E  + + +LDL +G+G + LA+ K  P    +  DIS +++   + N 
Sbjct: 65  ILEAYKY----LENNNNLDVLDLCSGSGFIALAIKKHFPKINVMASDISEESIRQIQENV 120

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N +   F  L+SD F  +E  FD+IVSNPPY+     + L   V  ++P ++L    +
Sbjct: 121 AINNLDIFF--LKSDLFEKIEKKFDLIVSNPPYLSH--KNVLDESVSKYEPHLALFAKKE 176

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G      I     + L  +G+  +EI      D V+         V+  KD     R+
Sbjct: 177 GFEIIEKIIFSAKKFLKSNGVLLLEID----TDKVKFINKIDFIQVSYLKDINNKTRI 230


>gi|329726153|gb|EGG62625.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU144]
          Length = 278

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A+ R +  E I  I+G + FY  +  ++     PRPETE   +  L F L   +K D
Sbjct: 56  LDKALDRMVAGEPIQYIVGLQSFYGYQYKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154
              I D+GTG+GA+ + L    P    +  D+   AL +AK NA     + +F   + L+
Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALNVAKQNASHYHQNIQFLRGNALK 169

Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               + ++   D ++SNPPYI  S I+D +   V +++P  +L    +G + Y +I + +
Sbjct: 170 PLIENDIK--LDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESILEDL 226

Query: 214 SRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              + + G    EIGY+Q    K+ +  ++  ++   V  FKD  GN R +
Sbjct: 227 PFVMKQGGYVVFEIGYSQGDILKIMIQDLYPEKE---VEIFKDINGNQRTI 274


>gi|257484475|ref|ZP_05638516.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289626422|ref|ZP_06459376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289649576|ref|ZP_06480919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298486374|ref|ZP_07004436.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159102|gb|EFI00161.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330866346|gb|EGH01055.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|331013259|gb|EGH93315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 302

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 7/187 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G N +
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259

Query: 233 VDVVRIF 239
           V V  ++
Sbjct: 260 VHVQALY 266


>gi|284992527|ref|YP_003411081.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geodermatophilus obscurus DSM 43160]
 gi|284065772|gb|ADB76710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geodermatophilus obscurus DSM 43160]
          Length = 286

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 89/189 (47%), Gaps = 13/189 (6%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  + G   F ++ L +    F PRPETE LV+ ALA    R+       ++DLG+G+G
Sbjct: 67  PLQHLTGRAPFRSLELAVGPGVFVPRPETEQLVEWALA----RLAGLAEPVVVDLGSGSG 122

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW-----FSSVE 162
           A+ L++  E P  +   V+    A+E  + NA +   +     D L  D         ++
Sbjct: 123 AIALSIAHEHPGARVTAVERDPGAIEWTRHNAASRAAAGDTPVDVLSGDMTDPGLLRELD 182

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++VSNPPY+       +  EV D DP ++L GG DGL   R +    +R L   G 
Sbjct: 183 GTVDLVVSNPPYVPDGA--TVPREVADHDPPLALWGGPDGLDVVRGLLRTAARLLRPGGG 240

Query: 223 CSVEIGYNQ 231
             +E    Q
Sbjct: 241 LGIEHADQQ 249


>gi|184200615|ref|YP_001854822.1| protein methyltransferase HemK [Kocuria rhizophila DC2201]
 gi|183580845|dbj|BAG29316.1| protein methyltransferase HemK [Kocuria rhizophila DC2201]
          Length = 289

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 92/216 (42%), Gaps = 10/216 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VR 100
           + R    E +  I G   F  + L +    F PRPETELLV  AL  +    E  +V   
Sbjct: 61  VHRRAAREPLQHITGTAPFRQLELAVGPGVFVPRPETELLVQLALDHARAWREAGEVHPA 120

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ++DLGTG+GA+ LA+  E P  +   V+    AL   + N        R   L+ D+   
Sbjct: 121 VIDLGTGSGAIALAVASEDPACRVTAVEREPAALAWTRRNLAGT----RVRLLECDYRDV 176

Query: 160 --SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRH 216
                G F V+V+NPPY+    V     EVR+ DP  +L GG   G+ H     D   R 
Sbjct: 177 SVPTAGRFCVVVTNPPYVPETDVP-RDPEVREHDPATALYGGDATGMRHPLAAMDTAVRV 235

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L   G   +E   +Q   V      R    V   +D
Sbjct: 236 LRPGGSFIMEHAESQVEAVAHALRERSFRNVELHRD 271


>gi|111115019|ref|YP_709637.1| HemK family methylase [Borrelia afzelii PKo]
 gi|110890293|gb|ABH01461.1| HemK family methylase, putative [Borrelia afzelii PKo]
          Length = 273

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  +++    + I +  K   IH IL  ++F  +  TL+     PR +TE L
Sbjct: 35  IIANIKKSLTKKEKNLFFDHIYKIEKGTPIHYILKKKEFMGIEFTLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           V+ AL     +I++    +ILDL  G+G + +++     ++    V   DIS KAL+I +
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGISI----AYYMKKKVMLSDISIKALQIVE 146

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195
            N     + +  + + S+    ++G  D+I++NPPY+         LE+++    +P  +
Sbjct: 147 KNTKKLKLEKFVEIIHSNLLKCIKGRIDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201

Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           L G G DGL+  R I       LN +GL  +E
Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233


>gi|111021210|ref|YP_704182.1| site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus
           jostii RHA1]
 gi|110820740|gb|ABG96024.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Rhodococcus jostii RHA1]
          Length = 262

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 90/208 (43%), Gaps = 7/208 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +    +  +LGW +F  +R+ +    F PR  T  LV+ A A + P      
Sbjct: 42  LASMLDRRVAGVPLEHVLGWAEFCGLRIAVDPRVFVPRRRTAFLVEQAAALAGPH----- 96

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              + DL  G+GAV  AL +     +   VDI   A+  A+ N    G     D L    
Sbjct: 97  -AVVADLCCGSGAVGAALAETGDGIELYAVDIDPAAVRCARRNVPDPGRVFEGD-LYEPL 154

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +++ G  DV+V+N PY+ +  +  +  E R  +PR+SLDGG DGL   R +  G    L
Sbjct: 155 PTALRGGIDVLVANAPYVPTDAIRLMPPEARFHEPRVSLDGGADGLDIQRRMTLGARDWL 214

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              G   +E    Q       F    L 
Sbjct: 215 APGGHLLIETSAGQAPLTAEAFADAGLI 242


>gi|238810251|dbj|BAH70041.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 241

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%)

Query: 25  DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 7   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 66

Query: 80  LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +VD  L  F+    E      +LDL  G+G + LA+ K     K   VDIS +A++   
Sbjct: 67  EMVDIYLKEFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 120

Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193
            N++ N G +      QSD F++V+G FDVI+SNPPY+     +C    L  +   F+P+
Sbjct: 121 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           I+L    DG   Y  I      +L K+G   +EI 
Sbjct: 176 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 210


>gi|332671312|ref|YP_004454320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas fimi ATCC 484]
 gi|332340350|gb|AEE46933.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas fimi ATCC 484]
          Length = 306

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 87/187 (46%), Gaps = 5/187 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  I+G   F  + L +    F PRPETE++   A+  +   +       ++D
Sbjct: 64  RRRRREPLQHIVGRTTFRWLTLHVEPGVFVPRPETEVVAQVAVDEAARLVAAGTSPVVVD 123

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           L  G G + LA+  E P  +   VD S  A+ + + NA   G   R    D   +   + 
Sbjct: 124 LCCGAGGLGLAVATEVPGSRVAAVDASPAAVALTRRNAADAGADVRVLPGDVRDTGLLAD 183

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219
           + G  DV+VSNPPYI     + +  EVRD DP ++L  GG DGL   R +     R L  
Sbjct: 184 LAGRVDVVVSNPPYIPP-DAEPVDPEVRDHDPDLALYGGGADGLDVPRAVLAAAVRLLRP 242

Query: 220 DGLCSVE 226
            GL  +E
Sbjct: 243 GGLLVME 249


>gi|167555081|ref|NP_001107891.1| hemK methyltransferase family member 1 [Danio rerio]
 gi|161611486|gb|AAI55790.1| Hemk1 protein [Danio rerio]
          Length = 342

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
            L D++R  +     + L    +  ++   DF ++ L +    F PRPETE LV   L  
Sbjct: 97  TLTDKERETVWKLCSKRLTRMPVQYVIEEWDFRDLTLKMKPPVFIPRPETEELVGLVL-- 154

Query: 89  SLPRIEKRDVVRI----LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                E  + +R     L++G G+GA+ L+LL+  P  +   +D S  A+ +   NA   
Sbjct: 155 -----EDFESIRGDFHGLEVGCGSGAISLSLLRSLPQLRVFALDQSQDAVCLTMENANRL 209

Query: 145 GVSERFDTLQSDWFSSVEGLF------DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           G+ +R +    D     + +       D IVSNPPYI S  ++ L  E+  F+   +LDG
Sbjct: 210 GLQDRLEVHHLDVVKDADVILSKCNPVDFIVSNPPYILSQDMEALQTEILGFEDHAALDG 269

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           G DGL   R I    S+ L K G   +E+ 
Sbjct: 270 GSDGLFVIRPILALASKLLTKQGRVYLEVS 299


>gi|308190291|ref|YP_003923222.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
 gi|307625033|gb|ADN69338.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
          Length = 237

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%)

Query: 25  DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 3   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62

Query: 80  LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +VD  L  F+    E      +LDL  G+G + LA+ K     K   VDIS +A++   
Sbjct: 63  EMVDIYLKKFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 116

Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193
            N++ N G +      QSD F++V+G FDVI+SNPPY+     +C    L  +   F+P+
Sbjct: 117 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 171

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           I+L    DG   Y  I      +L K+G   +EI 
Sbjct: 172 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 206


>gi|66045094|ref|YP_234935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae B728a]
 gi|63255801|gb|AAY36897.1| Modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
 gi|330973273|gb|EGH73339.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 302

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81
           DS LD R      + + R +K     R+     LG   F  +   +      PR     L
Sbjct: 54  DSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWFCGMSFIVDDRVLIPRSPIAEL 113

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++   A  L      +  RILDL TG+G + +A  +  P  +    D+S  ALE+A  N 
Sbjct: 114 IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNI 169

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +G+ +R  T+Q D F  + G  FD+IVSNPPY+++     +  E +  +P ++L  G 
Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGS 228

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           DGL+  R +    + HLN+ GL  VE+G N +V V  ++
Sbjct: 229 DGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQVHVQALY 266


>gi|319777685|ref|YP_004137336.1| protoporphyrinogen oxidase [Mycoplasma fermentans M64]
 gi|318038760|gb|ADV34959.1| Protoporphyrinogen oxidase [Mycoplasma fermentans M64]
          Length = 237

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%)

Query: 25  DPDSVLDDRQRFFLTNAIVRS-----LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 3   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62

Query: 80  LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +VD  L  F+    E      +LDL  G+G + LA+ K     K   VDIS +A++   
Sbjct: 63  EMVDIYLKEFAAENQE------VLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTI 116

Query: 139 SNAVTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC----LGLEVRDFDPR 193
            N++ N G +      QSD F++V+G FDVI+SNPPY+     +C    L  +   F+P+
Sbjct: 117 ENSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYL-----NCNDKSLDWKALSFEPK 171

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           I+L    DG   Y  I      +L K+G   +EI 
Sbjct: 172 IALCAPEDGWYFYDKILKKYKNYLKKNGWLIMEIN 206


>gi|217967195|ref|YP_002352701.1| modification methylase, HemK family [Dictyoglomus turgidum DSM
           6724]
 gi|217336294|gb|ACK42087.1| modification methylase, HemK family [Dictyoglomus turgidum DSM
           6724]
          Length = 282

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 118/219 (53%), Gaps = 20/219 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           ++ I+  + FY++ L +      PR ETE+L++ A       I K    +I+++G G+G 
Sbjct: 70  LNYIIEKKQFYDIELFVERGVLIPRSETEILIEVAKD----TILKEGYKKIVEIGVGSGN 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFSSVEGLF 165
           + + L KE    K    DIS +A+++A+ NA  + VS++ +      L      +V+  F
Sbjct: 126 ISITLAKEFKDIKIYACDISPEAIKVARFNAKKHKVSDKIEFFFGFLLYPMVHRNVD--F 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++I+SNPPYI S     L  EV+  +P  +L GG DG   YR +   + +   K+    +
Sbjct: 184 ELIISNPPYIASWEFPFLQKEVKK-EPWKALYGGWDGCEFYRKLFTLLKKR-GKNFTAIL 241

Query: 226 EIG---YNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVL 260
           EI    Y++ +++++  F+S    ++ +F+DY G++RV+
Sbjct: 242 EISPYIYHKVLNILKNFFDS---VIIESFRDYLGHERVI 277


>gi|121604711|ref|YP_982040.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polaromonas naphthalenivorans CJ2]
 gi|120593680|gb|ABM37119.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 298

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P       DIS  AL +A+ N   + ++ R   ++SD  +
Sbjct: 135 RVLDLCTGNGSLAILAAMTYPEVVVDAADISPDALAVARINVDRHQLASRITLIESDGLA 194

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  G +D+I+ NPPY+ +  +  L  E R  +P ++L GG DG+   R++    +  +N+
Sbjct: 195 NCPGGYDLILCNPPYVNAASMAALPAEFR-AEPGLALAGGADGMDFIRSLFLNAAAQMNE 253

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + +  +EIG N++ +  R F   K F    F+   G+D+VLL  
Sbjct: 254 NAVLVLEIG-NERENFERAFPHLKPFW---FETSAGSDQVLLLT 293


>gi|54025403|ref|YP_119645.1| putative methyltransferase [Nocardia farcinica IFM 10152]
 gi|54016911|dbj|BAD58281.1| putative methyltransferase [Nocardia farcinica IFM 10152]
          Length = 263

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + + +    +  ++GW +F  +R+ +    F PR  T  LVD+ALA +    E+  
Sbjct: 38  LAELVRQRVSGTPLEYVVGWAEFRGLRVAVRPGVFVPRRRTAFLVDTALAVAR---ERPG 94

Query: 98  VVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKALEIAKSNAVTNGV---SERF 150
            + ++DL  G GA+ LA   E        +    D+   A+  A+ N   +G     + F
Sbjct: 95  TLCVVDLCCGCGALGLAFATEMRAHGRTVELTAADVDPTAVCCARGNLAGHGTVHEGDLF 154

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           D L +D    + G  D++++N PY+ +  +  +  E RD +PR +LDGG DGL  +R +A
Sbjct: 155 DALPTD----LRGRIDILLANVPYVPTAGIAGMPPEARDHEPRAALDGGADGLDVFRRVA 210

Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233
                 L   G    E    Q  
Sbjct: 211 AAAPDWLAPGGTVFFESSREQAT 233


>gi|329964683|ref|ZP_08301737.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
           12057]
 gi|328525083|gb|EGF52135.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
           12057]
          Length = 247

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 8/251 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S+    +  D +L  ++   L   + R    E I  + G  +F   R  ++     PR
Sbjct: 3   GQSTVDYYLGKDIILSSKEEQELEGILSRLRDFEPIQYVQGGVNFMGHRFRVAPGVLIPR 62

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L       E     RILD+GTG+G + ++L K  P  + V  D+S +AL 
Sbjct: 63  PETEELVEIMLK------EIPAEARILDVGTGSGCIAVSLSKGLPDARVVAWDVSEEALA 116

Query: 136 IAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           IA+ N      S RF          S E  +DVIVSNPPY+       +   V D++P +
Sbjct: 117 IARGNNEALQASVRFALCNVLTCRPSREDRYDVIVSNPPYVLEKERREMERNVLDWEPSL 176

Query: 195 SL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +L     D L  YR IA+     L   G    EI        V +   +        KD 
Sbjct: 177 ALFVPDTDPLRFYRRIAELGREMLVAGGRLYFEINRAFGEATVAMLCEQGYANARILKDI 236

Query: 254 GGNDRVLLFCR 264
            GNDR +L  R
Sbjct: 237 SGNDRFVLAER 247


>gi|120598374|ref|YP_962948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. W3-18-1]
 gi|120558467|gb|ABM24394.1| modification methylase, HemK family [Shewanella sp. W3-18-1]
 gi|319426848|gb|ADV54922.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella putrefaciens 200]
          Length = 314

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYNKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   GL  VE+G N  V ++  F       +N F++  G D V +  R
Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297


>gi|219557201|ref|ZP_03536277.1| hypothetical protein MtubT1_07810 [Mycobacterium tuberculosis T17]
          Length = 267

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 95/202 (47%), Gaps = 12/202 (5%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+G
Sbjct: 67  PLQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSG 121

Query: 110 AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL 164
           A+ +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G 
Sbjct: 122 ALAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQ 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +
Sbjct: 182 VDLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFA 239

Query: 225 VEIGYNQKVDVVRIFESRKLFL 246
           VE         V +  S KLF+
Sbjct: 240 VEHDDTTSSSTVDLVSSTKLFV 261


>gi|255029751|ref|ZP_05301702.1| hypothetical protein LmonL_13024 [Listeria monocytogenes LO28]
          Length = 209

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 78/161 (48%), Gaps = 5/161 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++ ++    L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV  A AF    ++K  V  +LD+ TG+G + +AL K  P       DIS  AL 
Sbjct: 94  PETEELVACAEAF----LKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDISAPALV 149

Query: 136 IAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYI 175
           +A+ NA+      RF +T   + F   E  FD+IV+NPPYI
Sbjct: 150 VARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYI 190


>gi|254385550|ref|ZP_05000876.1| methylase [Streptomyces sp. Mg1]
 gi|194344421|gb|EDX25387.1| methylase [Streptomyces sp. Mg1]
          Length = 257

 Score = 82.0 bits (201), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           R    L+  + R +  E +  ++GW  F  +R+ +    F PR  +E L   A A +   
Sbjct: 29  RDDGHLSQMLARRVAGEPLEIVVGWAGFCGLRMEVGEGVFVPRRRSEFLASEAAALT--- 85

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER 149
              R    ++DL  G GA+  A+        GV     DI   AL  A+ N    G    
Sbjct: 86  --PRAGAVVVDLCCGVGALGAAVADR--VGGGVQLHAADIDPVALAYARRNVAPYGGRVH 141

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              L +    ++ G  DV+V N PY+ +  +  L  E RD +P +SLDGG DGL  +R +
Sbjct: 142 EGDLYAALPEALRGRVDVLVVNAPYVPTGELGLLPAEARDHEPLVSLDGGADGLDIHRRV 201

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
           A   +  L   G   +E G +Q 
Sbjct: 202 AAQAAHWLAPGGHLLIETGEHQH 224


>gi|329734115|gb|EGG70433.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU045]
          Length = 277

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  ++     
Sbjct: 31  VFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLI 90

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE   +  L F L   +K D   I D+GTG+GA+ + L    P    +  D+   A
Sbjct: 91  PRPETE---EVMLHF-LELCKKTDT--IADIGTGSGAIAITLKLLQPELNVIATDLYEDA 144

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRD 189
           L +AK NA     + +F   + L+    + ++   D ++SNPPYI  S I+D +   V +
Sbjct: 145 LNVAKQNASHYHQNIQFLRGNALKPLIENDIK--LDGLISNPPYIGHSEIID-MESRVLN 201

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLF 245
           ++P  +L    +G + Y +I + +   + + G    EIGY+Q    K  +  ++  ++  
Sbjct: 202 YEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE-- 259

Query: 246 LVNAFKDYGGNDRVL 260
            V  FKD  GN R++
Sbjct: 260 -VEIFKDINGNQRII 273


>gi|329735678|gb|EGG71961.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU028]
          Length = 277

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  ++     
Sbjct: 31  VFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLI 90

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE   +  L F L   +K D   I D+GTG+GA+ + L    P    +  D+   A
Sbjct: 91  PRPETE---EVMLHF-LELCKKTDT--IADIGTGSGAIAITLKLLQPELNVIATDLYEDA 144

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRD 189
           L +AK NA     + +F   + L+    + ++   D ++SNPPYI  S I+D +   V +
Sbjct: 145 LNVAKQNASHYHQNIQFLRGNALKPLIENDIK--LDGLISNPPYIGHSEIID-MESTVLN 201

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLF 245
           ++P  +L    +G + Y +I + +   + + G    EIGY+Q    K  +  ++  ++  
Sbjct: 202 YEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE-- 259

Query: 246 LVNAFKDYGGNDRVL 260
            V  FKD  GN R++
Sbjct: 260 -VEIFKDINGNQRII 273


>gi|242086244|ref|XP_002443547.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor]
 gi|241944240|gb|EES17385.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor]
          Length = 336

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 12/169 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     + ++     PRPETE +VD   A     +E        DLGTG+GA+ +A+ 
Sbjct: 166 WRDLV---VAVAEGVLIPRPETEAVVDMVRA-----VEGFADGWWADLGTGSGAIAVAVA 217

Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172
           +E     +    D+S  A+++A+ N    GV ++ +     WF  ++   G    ++SNP
Sbjct: 218 RELGAHGRVFATDVSEVAIDVARLNVQRYGVQDKVEIRHGSWFEPLQDLKGKLMGVISNP 277

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           PYI +  +  L  EV   +P+++LDGG DGL H   + +G+S  L   G
Sbjct: 278 PYIPTDDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLEPGG 326


>gi|317478585|ref|ZP_07937742.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36]
 gi|316905226|gb|EFV27023.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36]
          Length = 278

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 111/267 (41%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S     +  D +L  +    L + + R    E I  + G   F 
Sbjct: 20  EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L    P        RILD+GTG+G + + L KE P 
Sbjct: 80  GRTFRVAPGVLIPRPETEELVERMLEEVAP------ASRILDIGTGSGCIAVTLSKELPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESV 178
            +    DIS +AL IA  N      S +F  +Q D   +  + +  FDVIVSNPPY+   
Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTET 191

Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V +++P  +L     D L  YR I +     L   G    EI       V  
Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +    V   KD  GNDR ++  R
Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278


>gi|284993169|ref|YP_003411724.1| modification methylase, HemK family [Geodermatophilus obscurus DSM
           43160]
 gi|284066415|gb|ADB77353.1| modification methylase, HemK family [Geodermatophilus obscurus DSM
           43160]
          Length = 287

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 87/207 (42%), Gaps = 9/207 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--- 100
           R +  E +  +LGW  F  +R+ +    F PR  T LLV+ A+A        RD  R   
Sbjct: 49  RRVAGEPLELVLGWTAFCGLRVAVEPGVFVPRQRTALLVERAVAL------LRDAPRTPL 102

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DL  G+GAV LA+       +    D+   A+  A+ N    G       L +   + 
Sbjct: 103 VVDLCCGSGAVGLAVATALGPVELHAADVDPAAVRCARRNLAGVGGRVHQGDLYAALPAG 162

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  D++  N PY+ S  +  +  E RD +PR +LDGG DG    R +A      L   
Sbjct: 163 LRGRVDLLAVNAPYVPSAALALMPPEARDHEPRTALDGGPDGTGLQRRVAAEARDWLAPG 222

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLV 247
           G   VE    Q        E   L  V
Sbjct: 223 GSLIVETSVRQAPHTAAAVEGAGLRAV 249


>gi|203284117|ref|YP_002221857.1| HemK family methylase [Borrelia duttonii Ly]
 gi|201083560|gb|ACH93151.1| HemK family methylase [Borrelia duttonii Ly]
          Length = 277

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%), Gaps = 20/219 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH ILG ++F  ++  ++     PR +TE LV+ AL     +I+K ++ +ILDL  G+G 
Sbjct: 64  IHYILGTKEFMGIKFYINKHVLIPRDDTECLVEEALI----QIKKNNLSKILDLCCGSGC 119

Query: 111 VCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L +   LK+    K    DIS +AL+++  N     ++   +  +S+    +   F++
Sbjct: 120 IGLTIAYYLKQ----KVTLADISAQALKVSLKNTQRLNLTNHIEIKRSNLLKYIGKKFEL 175

Query: 168 IVSNPPYI---ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+   E  I + L  E     PRI+L G G DGL   + I       L K+GL 
Sbjct: 176 IITNPPYLTKDELRIKEKLAKE-----PRIALLGFGQDGLKIAKKIIKQAKYKLTKNGLL 230

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +E+   QK  + +         +    D    +R LL 
Sbjct: 231 ILEMAPWQKKSLEKFAIQEGFTSLKTIYDIENRERALLL 269


>gi|330889872|gb|EGH22533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 302

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 7/187 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G N +
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259

Query: 233 VDVVRIF 239
           V V  ++
Sbjct: 260 VHVQALY 266


>gi|270295601|ref|ZP_06201802.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274848|gb|EFA20709.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 278

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 111/267 (41%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S     +  D +L  +    L + + R    E I  + G   F 
Sbjct: 20  EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILSRLCNFEPIQYVQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L    P        RILD+GTG+G + + L KE P 
Sbjct: 80  GRTFRVAPGVLIPRPETEELVERMLEEVAP------ASRILDIGTGSGCIAVTLSKELPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESV 178
            +    DIS +AL IA  N      S +F  +Q D   +  + +  FDVIVSNPPY+   
Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPTEDEYFDVIVSNPPYVTET 191

Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V +++P  +L     D L  YR I +     L   G    EI       V  
Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +    V   KD  GNDR ++  R
Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278


>gi|170720621|ref|YP_001748309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida W619]
 gi|169758624|gb|ACA71940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas putida W619]
          Length = 302

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCQLEDDERVRLQHLLKRRIEDRVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RILDL TG+G + +   +  P  + V  D+S +ALE+A  N   +G
Sbjct: 118 FEPWL----ANEPARILDLCTGSGCIGIVAAEVFPEAEVVLADLSFEALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER  T+Q D F+ + G  FD+I+SNPPY+++     +  E    +P + L  G DGL 
Sbjct: 174 LDERVYTVQGDGFAGLPGQRFDLILSNPPYVDAEDFGDMPAEYH-HEPEMGLACGNDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL++ GL  VE+G +Q
Sbjct: 233 LVRRMLAEAAEHLSEKGLLIVEVGNSQ 259


>gi|27468633|ref|NP_765270.1| protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
 gi|57867592|ref|YP_189288.1| HemK family modification methylase [Staphylococcus epidermidis
           RP62A]
 gi|251812172|ref|ZP_04826645.1| HemK family methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876475|ref|ZP_06285341.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis SK135]
 gi|293366081|ref|ZP_06612769.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27316180|gb|AAO05314.1|AE016749_260 protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
 gi|57638250|gb|AAW55038.1| modification methylase, HemK family [Staphylococcus epidermidis
           RP62A]
 gi|251804269|gb|EES56926.1| HemK family methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294727|gb|EFA87255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis SK135]
 gi|291319804|gb|EFE60162.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
          Length = 278

 Score = 81.6 bits (200), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 20/231 (8%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A+ R +  E I  I+G++ FY  +  ++     PRPETE   +  L F L   +K D
Sbjct: 56  LDKALDRMITGEPIQYIVGFQSFYGYQYKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQ 154
              I D+GTG+GA+ + L    P    +  D+   AL +AK NA     + +F   + L+
Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALNVAKQNASHYHQNIQFLRGNALK 169

Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               + ++   D ++SNPPYI  S I+D +   V +++P  +L    +G + Y +I + +
Sbjct: 170 PLIENDIK--LDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESILEDL 226

Query: 214 SRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              + + G    EIGY+Q    K  +  ++  ++   V  FKD  GN R++
Sbjct: 227 PFVMKQGGHVVFEIGYSQGDILKRMIQDLYPEKE---VEIFKDINGNQRII 274


>gi|289569312|ref|ZP_06449539.1| hypothetical protein hemK [Mycobacterium tuberculosis T17]
 gi|289543066|gb|EFD46714.1| hypothetical protein hemK [Mycobacterium tuberculosis T17]
          Length = 288

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 95/201 (47%), Gaps = 12/201 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G   F  V L +    F PRPETE ++  A A SLP    R +  I+D  TG+GA
Sbjct: 89  LQHLIGTVSFGPVVLHVGPGVFVPRPETEAILAWATAQSLP---ARPL--IVDACTGSGA 143

Query: 111 VCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165
           + +AL +         + +G+D S  AL+ A+ NA    V   R D         ++G  
Sbjct: 144 LAVALAQHRANLGLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQV 203

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D++VSNPPYI    V  L  EV   DP  +L GG DG++    +     R L   GL +V
Sbjct: 204 DLMVSNPPYIPDAAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAV 261

Query: 226 EIGYNQKVDVVRIFESRKLFL 246
           E         V +  S KLF+
Sbjct: 262 EHDDTTSSSTVDLVSSTKLFV 282


>gi|242241524|ref|ZP_04795969.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
 gi|242235067|gb|EES37378.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
          Length = 278

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 26/234 (11%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L  A+ R +  E I  I+G++ FY  +  ++     PRPETE   +  L F L   +K D
Sbjct: 56  LDKALDRMVTGEPIQYIVGFQSFYGYQFKVNQHCLIPRPETE---EVMLHF-LELCKKTD 111

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I D+GTG+GA+ + L    P    +  D+   AL +AK NA     S     +Q   
Sbjct: 112 T--IADIGTGSGAIAITLKLLQPELNVIATDLYEDALSVAKQNA-----SHYHQNIQFLR 164

Query: 158 FSSVEGL------FDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            ++++ L       D ++SNPPYI  S I+D +   V +++P  +L    +G + Y +I 
Sbjct: 165 GNALKPLIEKDIKLDGLISNPPYIGHSEIID-MESTVLNYEPHHALFAEKNGFAIYESIL 223

Query: 211 DGVSRHLNKDGLCSVEIGYNQ----KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + +   + + G    EIGY Q    K  +  ++  ++   V  FKD  GN R++
Sbjct: 224 EDLPFVMKQGGHVVFEIGYQQGDILKRMIQDLYPEKE---VEIFKDINGNQRII 274


>gi|219684666|ref|ZP_03539609.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr]
 gi|219672028|gb|EED29082.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr]
          Length = 273

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 20/212 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           V+ AL     +I++    +ILDL  G+G + L++     ++    V   DIS KAL+I +
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195
            N     + +  + ++S+    ++  FD+I++NPPY+         LE+++    +P  +
Sbjct: 147 KNTKKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201

Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           L G G DGL+  R I       LN +GL  +E
Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233


>gi|330961304|gb|EGH61564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 302

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+G + +A   E P  +    D+S  ALE+A  N   +G+ +R  T+Q D F 
Sbjct: 128 RILDLCTGSGCIGIACADEFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFD 187

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + G  FD+IVSNPPY+++     +  E +  +P ++L  G DGL+  R +    + HL 
Sbjct: 188 GLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLT 246

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           + GL  VE+G N +V V  ++
Sbjct: 247 EKGLLIVEVG-NSQVHVQALY 266


>gi|288957889|ref|YP_003448230.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510]
 gi|288910197|dbj|BAI71686.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510]
          Length = 310

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 6/139 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F +     VD+S  ALE+AK N   +G  +R    Q 
Sbjct: 141 VERVLDLCTGSG--CLAILAARIFPEAQVDAVDLSPDALEVAKRNVADSGFEDRITLHQG 198

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F+ ++   +DVI++NPPY+++  +  L  E R  +P ++L GG DGL   R I     
Sbjct: 199 DLFAPLKTRKYDVIITNPPYVDAEAMGALPPEFR-AEPEMALAGGDDGLDIVRRILKEAP 257

Query: 215 RHLNKDGLCSVEIGYNQKV 233
           +HL  +G    E G  +++
Sbjct: 258 KHLTPEGGLLCEFGTGREI 276


>gi|153001286|ref|YP_001366967.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS185]
 gi|160875957|ref|YP_001555273.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS195]
 gi|217972783|ref|YP_002357534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS223]
 gi|304411862|ref|ZP_07393473.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS183]
 gi|307303370|ref|ZP_07583125.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica BA175]
 gi|151365904|gb|ABS08904.1| modification methylase, HemK family [Shewanella baltica OS185]
 gi|160861479|gb|ABX50013.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS195]
 gi|217497918|gb|ACK46111.1| modification methylase, HemK family [Shewanella baltica OS223]
 gi|304349722|gb|EFM14129.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS183]
 gi|306913730|gb|EFN44152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica BA175]
 gi|315268152|gb|ADT95005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS678]
          Length = 314

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYGKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   GL  VE+G N  V ++  F       +N F++  G D V +  R
Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297


>gi|51598457|ref|YP_072645.1| HemK family methylase [Borrelia garinii PBi]
 gi|51573028|gb|AAU07053.1| HemK family methylase, putative [Borrelia garinii PBi]
          Length = 273

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 20/212 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKMKKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           V+ AL     +I++    +ILDL  G+G + L++     ++    V   DIS KAL+I +
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195
            N     + +  + + S+    ++  FD+I++NPPY+         LE+++    +P  +
Sbjct: 147 KNTKKLKLEKFIEIIHSNLLKFIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201

Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           L G G DGL+  R I       LN +GL  +E
Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233


>gi|33592830|ref|NP_880474.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella pertussis Tohama I]
 gi|33572478|emb|CAE42049.1| putative adenine-specific methylase [Bordetella pertussis Tohama I]
 gi|332382243|gb|AEE67090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella pertussis CS]
          Length = 298

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 10/162 (6%)

Query: 74  PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDIS 130
           PR     L+D  LA   P + +   V R LD+ TG+G  CLA+L     P  +   VD+S
Sbjct: 109 PRSPIAELLDEGLA---PWVRDPLQVERALDMCTGSG--CLAILAALAFPVAQVDAVDVS 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A  N    G+ +R    Q + F ++    +DVIV NPPY+    +  L  E R 
Sbjct: 164 SDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQASMGALPQEYR- 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            +P ++L GG DG+   R I      +L+ DG+  +EIG+ +
Sbjct: 223 HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHER 264


>gi|21243453|ref|NP_643035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109008|gb|AAM37571.1| adenine-specific methylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 308

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD FS + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNITLLKSDLFSGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            + L  G DGL     I     +HL++DGL   E+G +++  +VR+     L  V 
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLLPEVDLAWVE 278


>gi|319893068|ref|YP_004149943.1| Methylase of polypeptide chain release factors [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162764|gb|ADV06307.1| Methylase of polypeptide chain release factors [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323463877|gb|ADX76030.1| methyltransferase, HemK family protein [Staphylococcus
           pseudintermedius ED99]
          Length = 280

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 14/230 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + + L    +  ++G  +FY  +  ++SD   PRPETE +V     + L ++    
Sbjct: 55  LNDGLSQLLTGMPVQYVVGQSEFYGRQFKVNSDVLIPRPETEEVVH----YFLTQLAAAK 110

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VV   D+G G+GA+ + L  E P  + +  DIS +AL +A+ NA    +      LQ + 
Sbjct: 111 VVA--DIGVGSGAIAITLKAERPELRVIATDISFQALAVARENA--QRLQRDITFLQGNA 166

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
              +   +   D ++SNPPYI       +   V  ++P ++L    +G   Y  I   + 
Sbjct: 167 LQPLIDQDVRLDGLISNPPYIGEHERTLMDNSVIQYEPHVALFAAQEGYQVYAAILRDLP 226

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLF 262
            H+ +DG   V EIG+ Q   + R+ +     +      D  G+ R+  F
Sbjct: 227 -HVMQDGAPVVFEIGFQQGAQLTRMMQQLYPHITPEVINDINGHARIFHF 275


>gi|219685801|ref|ZP_03540610.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04]
 gi|219672634|gb|EED29664.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04]
          Length = 273

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 20/212 (9%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           V+ AL     +I++    +ILDL  G+G + L++     ++    V   DIS KAL+I +
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSI----AYYTKKKVTLSDISIKALKIVE 146

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRIS 195
            N     + +  + ++S+    ++  FD+I++NPPY+         LE+++    +P  +
Sbjct: 147 KNTKKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKE-----ELEIKNKIKKEPAKA 201

Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           L G G DGL+  R I       LN +GL  +E
Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIE 233


>gi|330897669|gb|EGH29088.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330940028|gb|EGH43220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 302

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 2/134 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDL TG+G + +A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F
Sbjct: 127 ARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 186

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + G  FD+IVSNPPY+++     +  E +  +P ++L  G DGL+  R +    + HL
Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 245

Query: 218 NKDGLCSVEIGYNQ 231
           N+ GL  VE+G +Q
Sbjct: 246 NEKGLLIVEVGNSQ 259


>gi|148549090|ref|YP_001269192.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida F1]
 gi|148513148|gb|ABQ80008.1| modification methylase, HemK family [Pseudomonas putida F1]
 gi|313500007|gb|ADR61373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida BIRD-1]
          Length = 302

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D +L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGQLIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RILDL TG+G + +      P  + V  D+S +ALE+A  N   +G
Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R  T+Q D F  + G  FD+I+SNPPY+++   D +  E    +P + L  G DGL 
Sbjct: 174 LDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGSDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL + GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|126174960|ref|YP_001051109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS155]
 gi|125998165|gb|ABN62240.1| modification methylase, HemK family [Shewanella baltica OS155]
          Length = 314

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYGKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   GL  VE+G N  V ++  F       +N F++  G D V +  R
Sbjct: 246 ILANTAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297


>gi|15596875|ref|NP_250369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PAO1]
 gi|107101109|ref|ZP_01365027.1| hypothetical protein PaerPA_01002141 [Pseudomonas aeruginosa PACS2]
 gi|116049627|ref|YP_791568.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892367|ref|YP_002441234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa LESB58]
 gi|254234778|ref|ZP_04928101.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719]
 gi|296389941|ref|ZP_06879416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PAb1]
 gi|313110363|ref|ZP_07796252.1| putative DNA methylase [Pseudomonas aeruginosa 39016]
 gi|18203013|sp|Q9I347|Y1678_PSEAE RecName: Full=Uncharacterized adenine-specific methylase PA1678
 gi|9947650|gb|AAG05067.1|AE004595_6 probable DNA methylase [Pseudomonas aeruginosa PAO1]
 gi|115584848|gb|ABJ10863.1| putative DNA methylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126166709|gb|EAZ52220.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719]
 gi|218772593|emb|CAW28376.1| probable DNA methylase [Pseudomonas aeruginosa LESB58]
 gi|310882754|gb|EFQ41348.1| putative DNA methylase [Pseudomonas aeruginosa 39016]
          Length = 304

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +R  L   + R ++       +LG   F  +  ++      PR     L++  
Sbjct: 58  DCRLEDDERAELAEILRRRIEERIPAAYLLGEAWFCGIPFSVDERVLVPRSPIAELIEQR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  LP     +  RILDL TG+G + +A        + V  D+S  ALE+A  N   + 
Sbjct: 118 FAPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERHD 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER  T+Q D F+ + G  FD+IVSNPPY+++     +  E    +P + L  G DGL 
Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +    + HL++ GL  VE+G N +V V  ++
Sbjct: 233 LVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266


>gi|260906197|ref|ZP_05914519.1| methyltransferase [Brevibacterium linens BL2]
          Length = 295

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 102/236 (43%), Gaps = 20/236 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R  +   +  I+G   F ++ L +    F PRPETELLV   L   L R +   V  I
Sbjct: 61  IDRRRQRTPLQHIIGVAAFRHLELQVGPGVFVPRPETELLVTEVLE-ELERQQNTHVPFI 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--AVTNG------VSERFDTL 153
           +DL +G+GA+ L+L  E    + +GV+   +AL  +  N  AV  G      VS    T 
Sbjct: 120 IDLCSGSGAITLSLATEHRRLRAIGVERETQALNWSLMNLAAVDLGESSVDLVSGDATTF 179

Query: 154 QSD----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             D    W S+     DV+V+NPPY+    V     EVR+ DP  +L GG  GL     I
Sbjct: 180 AEDSPQLWASA-----DVVVTNPPYVPDTAV-PRDAEVREHDPEAALYGGATGLEIPGLI 233

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNAFKDYGGNDRVLLFCR 264
                + L   G   +E    Q       I  +  L     + DY G DR  +  R
Sbjct: 234 IIQAEKLLRPGGFFIMEHSEEQGPAARELIMSTASLRQAATYPDYTGRDRYTVAHR 289


>gi|146293548|ref|YP_001183972.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella putrefaciens CN-32]
 gi|145565238|gb|ABP76173.1| modification methylase, HemK family [Shewanella putrefaciens CN-32]
          Length = 314

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYNKPVTRILDLCTGSACIAIACAYEFEDAEVDALDISEDALDVAQINIETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS + EG  +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSGIPEGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   GL  VE+G N  V ++  F       +N F++  G D V +  R
Sbjct: 246 ILANAAQYLTPTGLLVVEVG-NSMVHLIEQFPEVPFTWIN-FEN--GGDGVFVLTR 297


>gi|24374600|ref|NP_718643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella oneidensis MR-1]
 gi|24349214|gb|AAN56087.1|AE015744_8 hemK family protein [Shewanella oneidensis MR-1]
          Length = 305

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+G + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 118 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQVNVETLGVMDRV 177

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY++   +  +  E    +P I L  G DGL   + 
Sbjct: 178 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 236

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   G+  VE+G N  V ++  F       VN F++  G D V +  R
Sbjct: 237 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVN-FEN--GGDGVFVLTR 288


>gi|16265092|ref|NP_437884.1| putative modification methylase protein [Sinorhizobium meliloti
           1021]
 gi|15141231|emb|CAC49744.1| putative modification methylase protein [Sinorhizobium meliloti
           1021]
          Length = 275

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  V L L+ D   PR ETELL  +A A      E+     ++D+  G+G + L + +E 
Sbjct: 53  FMGVDLELAPDVLVPREETELLGRNAAAIL---TERAGPATVIDMCCGSGNLALGIAEEV 109

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPY 174
           P  +  G D++   + +A+ N     + +R    Q D F++     +EG  D+IV NPPY
Sbjct: 110 PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFTALAGEDLEGAVDMIVCNPPY 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I +  ++     +   +PR + DGG  G+S H R I + V+  L   G    E G  Q  
Sbjct: 170 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 228

Query: 234 DVVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264
               +    K +    F +D  G  RV L  R
Sbjct: 229 QATALLARTKAYEAVTFAEDSAGKPRVALARR 260


>gi|221124898|ref|XP_002156820.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Hydra magnipapillata]
          Length = 551

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 18/190 (9%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R L  E +  ++   DF  + L++    F PRPETE           P ++K    + L
Sbjct: 333 TRRLNREPLQYLIEEWDFRLMTLSMKKPVFIPRPETE-----------PYLKKDS--KFL 379

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DWFSS 160
           ++G G+GA+ LA L E    + + +D +  A+ + + NA   GV++R + L    D  + 
Sbjct: 380 EVGCGSGAISLAFLTELSTVRCIALDKNQDAVSLTQENAQKLGVADRINVLHKTLDELTL 439

Query: 161 VEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           ++     FD+++SNPPYI    +  L  EV+ ++   +LDGG DGL   R+I     + +
Sbjct: 440 LDAGGEKFDMLISNPPYIPHKEMAFLQEEVKIYEHHDALDGGYDGLEVIRSILRSAHKFV 499

Query: 218 NKDGLCSVEI 227
              G   +E+
Sbjct: 500 CSQGYVWLEV 509


>gi|167032417|ref|YP_001667648.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida GB-1]
 gi|166858905|gb|ABY97312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas putida GB-1]
          Length = 302

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D +L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RILDL TG+G + +   +  P  + V  D+S +ALE+A  N   +G
Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAAEVFPEAEVVLADLSFQALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R  T+Q D F  + G  FD+I+SNPPY+++   D +  E    +P + L  G DGL 
Sbjct: 174 LDTRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL   GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTDKGLLIVEVGNSQ 259


>gi|307309486|ref|ZP_07589142.1| methyltransferase small [Sinorhizobium meliloti BL225C]
 gi|307320603|ref|ZP_07600017.1| methyltransferase small [Sinorhizobium meliloti AK83]
 gi|306893753|gb|EFN24525.1| methyltransferase small [Sinorhizobium meliloti AK83]
 gi|306900071|gb|EFN30691.1| methyltransferase small [Sinorhizobium meliloti BL225C]
          Length = 244

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  V L L+ D   PR ETELL  +A A      E+     ++D+  G+G + L + +E 
Sbjct: 22  FMGVDLELAPDVLVPREETELLGRNAAAIL---TERAGPATVIDMCCGSGNLALGIAEEV 78

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPY 174
           P  +  G D++   + +A+ N     + +R    Q D F++     +EG  D+IV NPPY
Sbjct: 79  PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFAALAGEDLEGAVDMIVCNPPY 138

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I +  ++     +   +PR + DGG  G+S H R I + V+  L   G    E G  Q  
Sbjct: 139 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 197

Query: 234 DVVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264
               +    K +    F +D  G  RV L  R
Sbjct: 198 QATALLARTKAYEAVTFAEDSAGKPRVALARR 229


>gi|319762955|ref|YP_004126892.1| protein-(glutamine-n5) methyltransferase, ribosomal protein
           l3-specific [Alicycliphilus denitrificans BC]
 gi|330825035|ref|YP_004388338.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans K601]
 gi|317117516|gb|ADV00005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans BC]
 gi|329310407|gb|AEB84822.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans K601]
          Length = 307

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 5/164 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG G++ +      P  +  G D+S  AL +A+ N   +G+ ER   +QSD  ++
Sbjct: 137 VLDLCTGNGSLAVLAAMAWPEVRVTGADLSPDALAVARINVERHGLQERIRLVQSDGLAA 196

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +D+I+ NPPY+ +  +  L  E R  +P ++L GG DG+     +       + +D
Sbjct: 197 VPGPWDLILCNPPYVNAQSMSELPAEYR-AEPELALAGGGDGMDFIHRLLREAPACMTED 255

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +  +EIG N++      F    +F     +   G D+VLL  R
Sbjct: 256 AVLVLEIG-NERAHFEAAFPQLPVFW---LQTSAGEDQVLLVTR 295


>gi|329941816|ref|ZP_08291081.1| methylase [Streptomyces griseoaurantiacus M045]
 gi|329299533|gb|EGG43433.1| methylase [Streptomyces griseoaurantiacus M045]
          Length = 254

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 8/208 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +T  + R +  E +  ++G  +F+ + +T+    F PR  TE LVD ALA +       D
Sbjct: 34  ITAMVDRRVAGEPLEIVVGRAEFHGLLITVEPGVFVPRRRTEFLVDQALALT------PD 87

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSD 156
              ++DL  G+GAV  AL       +    DI   A+  A+ N A   G     D L + 
Sbjct: 88  AGLVVDLCCGSGAVGAALAASPAAPRLHAADIDPVAVRCARRNLAPYEGHVHEGD-LYAA 146

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              ++ G  DV+ +N PY+ S  V  L  E R+ +P  +LDGG DGL   R +A G  R 
Sbjct: 147 LPDALRGRIDVLTANVPYVPSDEVRLLPAEAREHEPPAALDGGTDGLDLLRRVAAGAPRW 206

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G   VE    Q    +  F    L
Sbjct: 207 LAPGGALLVETSERQAPAALAAFTGAGL 234


>gi|192359208|ref|YP_001982421.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
 gi|190685373|gb|ACE83051.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
          Length = 302

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+G + +A     P  +    DIS  AL +A+ N   +G+ +R   LQSD F 
Sbjct: 130 RILDLCTGSGCIGIACAYMFPEAEVQLSDISYDALAVAEQNIQMHGLEDRVFALQSDGFE 189

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            ++G +FD+IVSNPPY+++  +  L  E R  +P + L  G+DGL   R +      HL 
Sbjct: 190 HMQGQVFDLIVSNPPYVDAEDMAGLPDEYRA-EPELGLASGVDGLDFTRQLLTCALDHLT 248

Query: 219 KDGLCSVEIG 228
           + GL  VE+G
Sbjct: 249 EAGLLVVEVG 258


>gi|120554489|ref|YP_958840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Marinobacter aquaeolei VT8]
 gi|120324338|gb|ABM18653.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Marinobacter aquaeolei VT8]
          Length = 301

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 10/181 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  +LG   F  +   +      PR     L+++ L    P +    V RILDL TG+G 
Sbjct: 85  IAYLLGEAWFMGMPFNVDERVLVPRSPIGELLENGLQ---PWLGATQVQRILDLCTGSGC 141

Query: 111 VCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + +     +  F    VD   +S  AL +A+SN   +G+  R   +QSD F ++EG +DV
Sbjct: 142 IGIG---AATVFDEAEVDLSDVSADALAVAESNIELHGLEGRVRAIQSDVFDNIEGRYDV 198

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPY+++  +  +  E    +P + L  G DGL     I    + +L  DGL  VE+
Sbjct: 199 IVSNPPYVDAEDLADMPAEYH-HEPELGLAAGDDGLDIAHRIVAQAADYLTDDGLLIVEV 257

Query: 228 G 228
           G
Sbjct: 258 G 258


>gi|257459362|ref|ZP_05624473.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
 gi|257443215|gb|EEV18347.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
          Length = 256

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 15/201 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F   +  +      PR ETE+LV   LA +    E R    I ++GTG+G + + L K 
Sbjct: 60  EFMGFKFYVDERVLIPRCETEILVKKTLALAQSLGEPR----ICEIGTGSGIIAICLKKL 115

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ES 177
            P  +    DIS  ALE+A++NA ++G    F  +   +   + G FD+IVSNPPYI  S
Sbjct: 116 LPSCRIAASDISADALEVARANAASSGADVEF--VHCAYADEIAGEFDLIVSNPPYIANS 173

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +D   L+    +P+ +L GG  G    + I    +R        + E+GY+QK   + 
Sbjct: 174 YTLDARVLQ----EPKQALFGGERGDEILKRIVLIAARRAK---FLACEMGYDQK-QSLS 225

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
            F   + F    +KD    DR
Sbjct: 226 AFLREQGFRAEFYKDLAQFDR 246


>gi|21231984|ref|NP_637901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66767889|ref|YP_242651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|188991005|ref|YP_001903015.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. B100]
 gi|21113717|gb|AAM41825.1| adenine-specific methylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573221|gb|AAY48631.1| adenine-specific methylase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732765|emb|CAP50959.1| Putative HemK-family S-adenosyl-methionine-dependent
           methyltransferase [Xanthomonas campestris pv.
           campestris]
          Length = 308

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|109039399|ref|XP_001098011.1| PREDICTED: hemK methyltransferase family member 1 isoform 2 [Macaca
           mulatta]
          Length = 338

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 104/233 (44%), Gaps = 12/233 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSYAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLQLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D+++SNPPYI    ++ L  E+R ++   +LDGG +G+     I     
Sbjct: 223 RSWTHLPWGPVDLVISNPPYIFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           R L   G   +E+       V    +SR    L LV   KD+ G  R L   R
Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPELYLNLVAVRKDFCGRSRFLHIQR 335


>gi|268590455|ref|ZP_06124676.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rettgeri DSM 1131]
 gi|291314135|gb|EFE54588.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rettgeri DSM 1131]
          Length = 310

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A   E P  +   VDIS   L +A+ N   +G+  R   ++SD F  
Sbjct: 136 ILDLCTGSGCIAIACAYEFPDAEVDAVDISSDVLAVAEQNIANHGLEHRVIPIRSDLFRD 195

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E  +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R I     R L +
Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLTE 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +G+   E+G N  V ++  +       ++   +YGG D V +  R
Sbjct: 255 EGVLVCEVG-NSMVHLIEQYPEIPFIWLDF--EYGG-DGVFMLTR 295


>gi|294155814|ref|YP_003560198.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
 gi|291600378|gb|ADE19874.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
          Length = 241

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   + +I+G+ ++ NV++ +  +   PR ETE L+  AL         ++  ++LDL  
Sbjct: 30  KQVPVQKIIGYIEYANVKINIQKNVLIPRYETEELIFLALK------NIKNDSKVLDLCC 83

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +AL   +   +    DI   A+E +K N + N V  +   ++SD F +++  FD
Sbjct: 84  GSGFIGIALKFNNKNLQVTLSDIDDNAIEQSKINTLENNV--KVKIIKSDLFENIDEKFD 141

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I+SNPPY+  +  + +   V + +P  +L    +GL  Y+ I     ++LNK+G    E
Sbjct: 142 CIISNPPYL--MKSENISNNVLNHEPHHALFADDNGLFFYKEIMKQSKKYLNKNGKLIFE 199

Query: 227 IG 228
           I 
Sbjct: 200 IN 201


>gi|255321586|ref|ZP_05362744.1| bifunctional methyltransferase [Campylobacter showae RM3277]
 gi|255301442|gb|EET80701.1| bifunctional methyltransferase [Campylobacter showae RM3277]
          Length = 277

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 30/264 (11%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R +   L     +S   + ++     D+   F L   + R   +E +  I G   FY + 
Sbjct: 23  RVAKILLMNYLDVSIEWIFLNQKKEFDESGYFAL---VKRYENYEPLEYITGEAGFYGLT 79

Query: 65  LTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             +      PRPETE+LV+ +L    +LP   +  +V  +  G+G  ++CLAL   +   
Sbjct: 80  FNVKKGVLIPRPETEILVEKSLEILSNLPARNEPPLVAEIGTGSGIISICLALNSNA--- 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K +  DIS  AL +A+ NA   GV  R   ++  +   + G FD++VSNPPYI       
Sbjct: 137 KIIASDISDDALNLARENAAKFGVEGRIKFVKCAYLDQIYGRFDLLVSNPPYI------- 189

Query: 183 LGLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                RD+        +P  +L GG  G    + I         K   C  E+GY+Q+  
Sbjct: 190 ----ARDYELDKFVLNEPHEALFGGAAGDEILKNIVLVAKNRGVKYLAC--EMGYDQRES 243

Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258
           +    +    F    ++D  G DR
Sbjct: 244 MQNALKFNG-FEAEFYRDLAGFDR 266


>gi|126667394|ref|ZP_01738366.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17]
 gi|126628150|gb|EAZ98775.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17]
          Length = 300

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 13/207 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L   +R  +   I R ++ +  +  +LG   F  +   +      PR     L+++ 
Sbjct: 60  DARLVREERELILERIERRVEEQVPLAYLLGEAWFMGLPFNVDPRVLVPRSPLAELLENG 119

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAV 142
           L    P +    V RILDL TG+G + +A    +  F G  VD   IS  AL +A SN  
Sbjct: 120 LQ---PWLGDVYVERILDLCTGSGCIGIA---AATVFDGAEVDLADISTDALAVADSNIA 173

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGID 201
            + + ER  T+QSD FS++   +DVI+SNPPY+ +   D  G+      +P + L  G D
Sbjct: 174 MHQLGERVRTVQSDVFSNLNERYDVILSNPPYVNA--RDLAGMPAEFGHEPVLGLAAGED 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIG 228
           GL     I  G +  L  +GL  VE+G
Sbjct: 232 GLEIAHRILAGAAERLTDNGLLIVEVG 258


>gi|126336076|ref|XP_001378754.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Monodelphis domestica]
          Length = 358

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 22/252 (8%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           + D Q+  +     R L+   +  ++G  DF  + L ++   F PRPETE LV+  L   
Sbjct: 92  ITDLQQEQIGELCTRRLQRMPVQYVIGEWDFQGLTLKMTPPVFIPRPETEELVNLVLHEQ 151

Query: 90  LPRIE----KRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             R +    KR +         ILD+  G+GA+ L+LL +    + V VD   +A+++ +
Sbjct: 152 SQRCQEFRRKRTLAHQSHSWPLILDVCCGSGAIALSLLSKLTQSRVVAVDKGEEAVQLTR 211

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            NA    + +R   ++ D  +SV        G  D +VSNPPYI    +  L  E+  ++
Sbjct: 212 ENAQRLHLEDRIQIVRHD-ITSVNREQLLPWGPVDFVVSNPPYIFHCDMAQLAPEILSYE 270

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVN 248
              SLDGG +G+S  R I       L   G   +E+       V +  +S     L L+ 
Sbjct: 271 DTDSLDGGENGMSVIREILSQAPMLLKDSGSIFLEVDPRHPELVEKWLQSHPDLGLSLLA 330

Query: 249 AFKDYGGNDRVL 260
              D+ G  R L
Sbjct: 331 THVDFCGKPRFL 342


>gi|294625088|ref|ZP_06703734.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666799|ref|ZP_06732033.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600597|gb|EFF44688.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603460|gb|EFF46877.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 308

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD FS + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFSGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            + L  G DGL     I     +HL++DGL   E+G +++  +VR+     L  V 
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLLPEVDLAWVE 278


>gi|330981968|gb|EGH80071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 189

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 3/142 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDL TG+G + +A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F
Sbjct: 14  ARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 73

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + G  FD+IVSNPPY+++     +  E +  +P ++L  G DGL+  R +    + HL
Sbjct: 74  DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 132

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
           N+ GL  VE+G N +V V  ++
Sbjct: 133 NEKGLLIVEVG-NSQVHVQALY 153


>gi|269957242|ref|YP_003327031.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305923|gb|ACZ31473.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 282

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 14/228 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  + G   F +V L +    F PRPETE +   A+  +   +++R    ++D
Sbjct: 55  RRARREPLQHLTGVAPFRHVELAVGPGVFVPRPETEQVAQVAIDEARRVVDERGSAVVVD 114

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
           L TG+GA+ LA+  E P  +   V++   A   A  N   +GV+     ++ D  ++   
Sbjct: 115 LCTGSGAIALAVATEVPGARVHAVELDAAAHAWAARNLAGSGVT----LVKGDARTTLRE 170

Query: 161 VEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHL 217
           ++G  DV+VSNPPY+  ++V  D    EV + DP ++L G G DGL   R I    +R L
Sbjct: 171 LDGAVDVVVSNPPYVPPDAVPRDP---EVAEHDPAVALYGLGADGLEVPRGITAAAARLL 227

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
              GL  +E    Q      + ++  L+       D  G  R+++  R
Sbjct: 228 RPGGLYVMEHAEVQDAAARAMVDATGLYAPATTADDLTGRPRMVVARR 275


>gi|297585439|ref|YP_003701219.1| protein-(glutamine-N5) methyltransferase [Bacillus selenitireducens
           MLS10]
 gi|297143896|gb|ADI00654.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus selenitireducens MLS10]
          Length = 307

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 22/229 (9%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPR---IEKRDVVRILDL 104
           +  + G   FY  R  ++ D   PRPETE LV++    L+  L      + ++ + I+D+
Sbjct: 76  VQHLTGEEVFYGRRFRVNRDVLIPRPETEELVEAVKERLSTGLSTSWDADSQEELGIVDI 135

Query: 105 GTGTGAVCLALLKESP-FFKG------VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           GTG+G + + L  E P + KG      +  DIS  ALE+A+ NA  +     F  L   +
Sbjct: 136 GTGSGILAITLALEIPGWLKGNQATRVIATDISRAALEMARINAEAHEAPVTF--LAGSY 193

Query: 158 FSSV--EGLFD-VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
              +   G+   +IVSNPPYI       +   V++ +P  +L    +GL+ YRT+ + + 
Sbjct: 194 LDPIIESGIRPRLIVSNPPYIPESDQAMMKDNVKNHEPHTALFAEENGLAAYRTMIEDLH 253

Query: 215 RHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGNDRVL 260
           R L+ +G     EIG+NQ  D VR   + +    +    +D  GN+R++
Sbjct: 254 RVLHPEGTWLFFEIGWNQG-DAVRTMITDRFPESSPEVIRDINGNERIV 301


>gi|127513345|ref|YP_001094542.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella loihica PV-4]
 gi|126638640|gb|ABO24283.1| modification methylase, HemK family [Shewanella loihica PV-4]
          Length = 314

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A   E    +   +DIS  ALE+A+ N  + GV +R 
Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYEFEDAEVDAIDISSDALEVAQINIESLGVMDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             ++SD F+++     +D+IVSNPPY+++  +  +  E    +P + L  G DGL   + 
Sbjct: 187 FPIESDMFAAIPKGPQYDLIVSNPPYVDAEDIGDMPEEYH-HEPELGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + +L +DGL  VE+G N  V ++  F       VN   ++GG D V +  R
Sbjct: 246 ILANAADYLTQDGLLVVEVG-NSMVHLMEQFPEVPFTWVNF--EHGG-DGVFVLTR 297


>gi|330954447|gb|EGH54707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae Cit 7]
          Length = 302

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 2/134 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDL TG+G + +A     P  +    D+S  ALE+A  N   +G+ +R  T+Q D F
Sbjct: 127 ARILDLCTGSGCIGIACADVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGF 186

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + G  FD+IVSNPPY+++     +  E +  +P ++L  G DGL+  R +    + HL
Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHL 245

Query: 218 NKDGLCSVEIGYNQ 231
           N+ GL  VE+G +Q
Sbjct: 246 NEKGLLIVEVGNSQ 259


>gi|227820142|ref|YP_002824113.1| methyl transferase [Sinorhizobium fredii NGR234]
 gi|227339141|gb|ACP23360.1| probable methyl transferase [Sinorhizobium fredii NGR234]
          Length = 275

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 106/225 (47%), Gaps = 16/225 (7%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILD 103
           SL +  + R++    F ++ + L+ D   PR ETELL  +A+     R+  R   V ++D
Sbjct: 47  SLANSPLPRLV---RFMDIEIELAPDVLVPREETELLGRNAVQ----RLRDRTGPVMVID 99

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +  G+G + L +    P  + +G D++   + +A+ N     + +R    Q D F+++EG
Sbjct: 100 MCCGSGNLALGIAAALPLAQVLGADLTDSTVALARRNVGLLSLQQRVSIRQGDLFAALEG 159

Query: 164 -----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHL 217
                  D+IV NPPYI +  ++     + D +PR + DGG  G+S H R I D V+  L
Sbjct: 160 DGLEGEIDMIVCNPPYISTSRLEGDSAHLLDSEPREAFDGGPYGISIHQRLIRDAVA-FL 218

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGNDRVLL 261
              G    E G  Q      +    K +   +F  D  G  RV +
Sbjct: 219 KPGGWLLFEFGEGQDRQAAALLSRAKAYEPVSFAHDAQGKPRVAI 263


>gi|26988557|ref|NP_743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida KT2440]
 gi|24983329|gb|AAN67446.1|AE016372_1 modification methylase, HemK family [Pseudomonas putida KT2440]
          Length = 302

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D +L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RILDL TG+G + +      P  + V  D+S +ALE+A  N   +G
Sbjct: 118 FEPWL----ASEPARILDLCTGSGCIGIVAADVFPEAEVVLADLSFQALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R  T+Q D F  + G  FD+I+SNPPY+++   D +  E    +P + L  G DGL 
Sbjct: 174 LDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGSDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL + GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|121607280|ref|YP_995087.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verminephrobacter eiseniae EF01-2]
 gi|121551920|gb|ABM56069.1| modification methylase, HemK family [Verminephrobacter eiseniae
           EF01-2]
          Length = 318

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 5/165 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL TG G++ +      P  +  G DIS +AL +A+ N   +G+ +R     SD  S
Sbjct: 150 QVLDLCTGNGSLAVLAALAWPEVQVTGADISPEALAVARINVERHGLQQRIALQLSDGLS 209

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++ G +D+I+ NPPY+ +  +  L  E R  +PR++L GG DG+   R +    +  ++ 
Sbjct: 210 ALPGPWDLILCNPPYVNAASMAALPAEYRA-EPRLALAGGADGMDFIRPLLRTAAACMSD 268

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +  +EIG N++      F       V+      G D+VLL  R
Sbjct: 269 NAVLVLEIG-NERPGFEAAFAQHP---VHWLATSAGPDQVLLLTR 309


>gi|77457946|ref|YP_347451.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens Pf0-1]
 gi|77381949|gb|ABA73462.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudomonas fluorescens Pf0-1]
          Length = 302

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 7/207 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +   L   + R ++       +LG   F  +   +      PR     L+++ 
Sbjct: 58  DCALEDDELVNLQRLLKRRIEERIPTAYLLGEAWFCGMSFIVDERVLIPRSPIGELIENR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A   P I   +  RILDL TG+G + +A   E    + V  D+S +ALE+A  N   +G
Sbjct: 118 FA---PWI-GDEPARILDLCTGSGCIGIACAYEFQNAEVVLADLSFEALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V ER  T+Q D F  + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL+
Sbjct: 174 VDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGDDGLN 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL + GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|288941148|ref|YP_003443388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Allochromatium vinosum DSM 180]
 gi|288896520|gb|ADC62356.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Allochromatium vinosum DSM 180]
          Length = 310

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 5/176 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++G   F  +   +      PR     LV+       P I+   V R+LDL TG+G + +
Sbjct: 91  LIGRAWFAGLEFRVDEQVLVPRSPIAELVEVGFD---PWIDADRVGRVLDLCTGSGCIGI 147

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNP 172
           A     P      VDIS +AL IA+ N   +GV +R    +SD F+++ +  +DVIVSNP
Sbjct: 148 AAAVYLPDADVDLVDISPEALVIARDNVERHGVGDRVHIFESDLFAALGDQRYDVIVSNP 207

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY+     + L  E  + +P + L  G DGL     I D  + HLN+ G+  VE+G
Sbjct: 208 PYVSRAEFEALPTEYHN-EPHLGLLAGEDGLDIVLRILDEAADHLNERGILVVEVG 262


>gi|261346200|ref|ZP_05973844.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rustigianii DSM 4541]
 gi|282565856|gb|EFB71391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rustigianii DSM 4541]
          Length = 310

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A   E P  +   VDIS   L +A+ N   +G+  R   ++SD F  
Sbjct: 136 ILDLCTGSGCIAIACAHEFPEAEVDAVDISADVLAVAEQNIANHGLEHRVIPIRSDLFRD 195

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E  +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R I     R L +
Sbjct: 196 MPEVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLTE 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +G+   E+G N  V ++  +       ++   ++GG D V +  R
Sbjct: 255 EGILVCEVG-NSMVHLIEQYPDIPFIWLDF--EFGG-DGVFMLTR 295


>gi|92114585|ref|YP_574513.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chromohalobacter salexigens DSM 3043]
 gi|91797675|gb|ABE59814.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 317

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 7/161 (4%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+ D   A+     ++    R+LDL  G+G + +A     P  +   VDIS  
Sbjct: 123 PRSPIAELIEDGFAAW----FDQWPPARVLDLCAGSGCIGIATALYLPTAEVDLVDISPD 178

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL +AK+N V + V  R   + SD F+ V G  +DVIVSNPPY+++  +  +  E R  +
Sbjct: 179 ALAVAKANIVRHDVGHRVRAVTSDLFAGVAGQRYDVIVSNPPYVDARDLAGMPAEFR-HE 237

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           P ++L  G DGL   R +      HL  DG+  VE+G + +
Sbjct: 238 PTLALAAGDDGLDIVRRMLREAREHLTDDGVLIVEVGNSAR 278


>gi|239994985|ref|ZP_04715509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii ATCC 27126]
          Length = 324

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG   + +AL    P  +   VDIS  ALE+A  N   +G+S R   +QSD FSS
Sbjct: 154 ILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHGLSHRVYPIQSDLFSS 213

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +EG  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL     +      +LN 
Sbjct: 214 LEGQKYDLIVSNPPYVDAEDMADLPEEYH-HEPELALAAGEDGLELVDIMLKEAPTYLND 272

Query: 220 DGLCSVEIGYNQKVDVVRIF 239
            G   VE+G N +V +   F
Sbjct: 273 GGWLFVEVG-NSEVHMSERF 291


>gi|62185242|ref|YP_220027.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila abortus S26/3]
 gi|62148309|emb|CAH64076.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 283

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAV 111
           I G   F  + L + S    PR ETELL +  + +    P I+        D+  G+G +
Sbjct: 71  IHGSVRFLQLDLEVDSRVLIPRMETELLAEKIIQYLTQHPHIQT-----FYDVCCGSGCL 125

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            L++ K  P  + +  DI  KA+ +AK NA  N +  + D L+ D F+      D  V N
Sbjct: 126 GLSIKKYCPNVQVILSDICPKAVAVAKINASKNHL--QVDVLEGDLFAPFSCPADAFVCN 183

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+    +     EVR  +P  +L GG  GL  Y  IA  +   L   G+  +EIGY+Q
Sbjct: 184 PPYLSFDEIMQTDPEVRCHEPWKALVGGSSGLEFYERIARDLDTILCPGGVGWLEIGYSQ 243

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              V RIF +  +   +  +D    DR+   
Sbjct: 244 GERVKRIFANHGVH-GSIHQDLSACDRIFFL 273


>gi|269792433|ref|YP_003317337.1| modification methylase, HemK family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100068|gb|ACZ19055.1| modification methylase, HemK family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 284

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 9/220 (4%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  K E +  +LG  DF      +      PRPETE+L   A     PR       R L
Sbjct: 60  ARRAKGEPLAYVLGTMDFLQWNFLVGPGCLIPRPETEVLASLAAETLGPR------GRFL 113

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFS 159
           D GTG+G +  +L       +GV +D S  AL+ A  N     +S R   +    + + S
Sbjct: 114 DWGTGSGCIACSLAMMVDGSQGVAMDASPGALKWAWRNVQRYRLSNRVLLVHGSSAHFIS 173

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                FD++V+NPPYI S  +  L   V  F+P ++L+GG  G+        G  R L  
Sbjct: 174 QDLTPFDLVVANPPYIPSEHMGELDGSVSRFEPHLALNGGDGGIQVPVEWLRGAVRLLRA 233

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            G   +E   + ++ ++   E   L  V + +D  G  RV
Sbjct: 234 GGQVLMETAGDWQLSILEALEIEGLSFVGSHQDQFGVRRV 273


>gi|167624580|ref|YP_001674874.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella halifaxensis HAW-EB4]
 gi|167354602|gb|ABZ77215.1| modification methylase, HemK family [Shewanella halifaxensis
           HAW-EB4]
          Length = 314

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 12/194 (6%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+ +    FS P +  + V R+LDL TG+G + +A   E    +   +DIS  
Sbjct: 113 PRSPIAELIANR---FS-PWLYNKPVNRVLDLCTGSGCIAIACAYEFEDAEVDALDISVD 168

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           ALE+A+ N  T  V +R   ++SD FS++     +D+IVSNPPY+++  +  +  E    
Sbjct: 169 ALEVAQINIETLEVMDRVFPMESDLFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYH-H 227

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P I L  G DGL   + I    + +L +DGL  VE+G N  V +   F       VN F
Sbjct: 228 EPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHLSEQFPDVPFTWVN-F 285

Query: 251 KDYGGNDRVLLFCR 264
           ++  G D V +  R
Sbjct: 286 EN--GGDGVFILTR 297


>gi|152985719|ref|YP_001348948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PA7]
 gi|150960877|gb|ABR82902.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas aeruginosa PA7]
          Length = 304

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 8/215 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +R  L   + R ++       +LG   F  +  ++      PR     L++  
Sbjct: 58  DCRLEDDERLELAEVLRRRIEERIPAAYLLGEAWFCGLPFSVDERVLVPRSPIAELIEQR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            +  LP     +  RILDL TG+G + +A        + V  D+S  ALE+A  N   + 
Sbjct: 118 FSPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANMNIERHD 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER  T+Q D F+ + G  FD+IVSNPPY+++     +  E    +P + L  G DGL 
Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +    + HL + GL  VE+G N +V V  ++
Sbjct: 233 LVRRMLAEAADHLGEKGLLIVEVG-NSEVHVQSLY 266


>gi|58582885|ref|YP_201901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624747|ref|YP_452119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577725|ref|YP_001914654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58427479|gb|AAW76516.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368687|dbj|BAE69845.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188522177|gb|ACD60122.1| modification methylase, HemK family [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 308

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+  ++P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHDNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|321253120|ref|XP_003192636.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus
           gattii WM276]
 gi|317459105|gb|ADV20849.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Cryptococcus gattii WM276]
          Length = 343

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 28/247 (11%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKR-- 96
           + R    E +  ILG  DF  + +        PRPET  +   + S +  S+P +     
Sbjct: 93  VKRRSAGEPLQYILGSADFGPLNIRCQKPVLIPRPETAHIFTRLSSTILSSVPSLTSASR 152

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             + + ILDL TGT  + L L   +P    VG+D S  A+ +  +N    G+ ER +   
Sbjct: 153 PLEPLPILDLCTGTACISLLLAHLNPLSTAVGIDNSPAAVSLGGANVKARGMEERVEVRY 212

Query: 155 SDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGID--GLS 204
            + F+        EG   ++VSNPPYI     + L   V+D++   +L  DG  D  GL+
Sbjct: 213 GNVFAEPARLLGREGKVGLVVSNPPYIPLKEWEQLPKSVKDWESPTALLGDGKKDGEGLA 272

Query: 205 HYRTIADGVS------RHLNKDGL-----CSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            Y  IA+ +         + K G       +VE+G  Q   V  IF+S ++     ++D 
Sbjct: 273 FYERIAEMLPDLLLDEGEMEKKGWKGVPRVAVEVGLGQARKVEEIFKSEQIKKTEIWQDQ 332

Query: 254 GGNDRVL 260
            G DR++
Sbjct: 333 FGLDRMV 339


>gi|256393897|ref|YP_003115461.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
 gi|256360123|gb|ACU73620.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
          Length = 257

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 15/206 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R    E +  ++GW +F  +R+ +    F PR  +E LV+ AL         R+
Sbjct: 38  LEALVARRCAGEPLEHVVGWAEFCGLRIGVGPGVFVPRRRSEFLVELALDLG------RE 91

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+      L       +    DI    L  A+ N     +  R  T + D 
Sbjct: 92  ARVVVDLCCGSAPFATVLAARLSGAEVHAADIDPAQLAYAREN-----LGRRGSTHEGDL 146

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + ++     G  D++V N PY+ +  +  L  E R F+P  SLDGG DGL+ +R +ADG 
Sbjct: 147 YEALPERLRGKVDLLVVNAPYVPTDALSTLPAEARVFEPAASLDGGADGLAVHRRVADGA 206

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L   G   +E    Q   ++  F
Sbjct: 207 PQWLAPRGHLLIETSEAQAEAMLEAF 232


>gi|290982847|ref|XP_002674141.1| predicted protein [Naegleria gruberi]
 gi|284087729|gb|EFC41397.1| predicted protein [Naegleria gruberi]
          Length = 250

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 42/249 (16%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----------R 100
           +  I+G  DF+     + S    PR ++E+L+++ L   +P I KR+ V          R
Sbjct: 1   MEYIVGNVDFFGRNFNVDSRVLIPRVDSEVLIETTLNQIVPLILKRNGVTNLSQLDRPLR 60

Query: 101 ILDLGTGTGAVC---------LALLKESPFFKGVGVDISCKALEIAKSNA---------V 142
           I+++G G+G +          + L K   F    G+D S  AL++A  NA         +
Sbjct: 61  IMEIGVGSGCLLITLLLELEKIGLQKVRAF----GIDKSEGALKVATLNAQNLIPKYMEL 116

Query: 143 TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES-VIVDCLGLEVRDFDPRISL 196
                +  + +Q D F   + +      D+I+SNPPYI + V+ + L  +V   +P ++L
Sbjct: 117 AGKDLKELEFIQHDIFKDDDWIHKDLEMDLIISNPPYIPTNVVQNELDKDVSTHEPHMAL 176

Query: 197 DGGIDGLSHYR-TIADGV-SRHLNKDGLCSVEIGYNQKVDV-VRIFESR-KLFLVNAFKD 252
           DGG+DG   Y   + D V S   N +G C +E+GY+Q   +  RI  SR  L  +   KD
Sbjct: 177 DGGLDGFDFYNYLLVDNVLSSKYNLNGHCVMEVGYDQANSLRERIINSRSSLQFLGTAKD 236

Query: 253 YGGNDRVLL 261
             G +RV++
Sbjct: 237 LSGYERVVM 245


>gi|332525856|ref|ZP_08401997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rubrivivax benzoatilyticus JA2]
 gi|332109407|gb|EGJ10330.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rubrivivax benzoatilyticus JA2]
          Length = 289

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P  +    D+S  AL +A  N   +G+  R    Q D  +
Sbjct: 123 RVLDLCTGNGSLAVLAAMAWPEVEVDASDLSADALAVAAINVARHGLQSRIRLRQGDGLA 182

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + +G++D+++ NPPY+ +  +  L  E R  +P ++L GG DG+   R +   + RHL+ 
Sbjct: 183 AADGVYDLVLCNPPYVNAEAMAALPAEYR-AEPELALAGGADGMDFVRLLLAELPRHLSP 241

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            G+  +EIG+ +            ++L    +   G D+VLL 
Sbjct: 242 HGVLVLEIGHERAHFEAAFPRLEAVWL----ETSAGEDQVLLL 280


>gi|167769700|ref|ZP_02441753.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM
           17241]
 gi|167668061|gb|EDS12191.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM
           17241]
          Length = 280

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 8/235 (3%)

Query: 32  DRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  +    NA+    K  E +  +LG  +FY +   +      PRP+TE LV++AL    
Sbjct: 49  DSAKLAAFNALAARYKAGEPLQYLLGMWEFYGLPFEVGPGVLIPRPDTETLVETALRL-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             ++      + DL  G+G +  A+    P      V++S  A      N   N      
Sbjct: 107 --LKGTAAPAVADLCAGSGCIAAAIAHARPDAHVYAVELSDAAFPYLVRNLARNAPGNA- 163

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + +  D F+       D+IVSNPPYI    ++ L  +VR ++P ++L GG DGL  YR +
Sbjct: 164 EAICGDAFAPPPLPPLDLIVSNPPYIARAEMETLSPQVR-WEPEMALLGGEDGLDFYRAL 222

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                  L   G  + E+GY Q   V  +         +  +D  G  RV+   R
Sbjct: 223 PRIWMPLLRPGGYIAFEVGYTQADTVAGLLGRSGYQSCSVERDLAGIRRVVWAQR 277


>gi|291278534|ref|YP_003495369.1| modification methylase HemK family [Deferribacter desulfuricans
           SSM1]
 gi|290753236|dbj|BAI79613.1| modification methylase, HemK family [Deferribacter desulfuricans
           SSM1]
          Length = 278

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 34/267 (12%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSV--LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
              L  + GL+   + +  D +  +DD+ +       ++  +   ++ I   R+FY +  
Sbjct: 31  KELLSYLFGLNYSDLFLHMDDIFLIDDKVK----EVFLKVKRKYPVNYITQNRNFYGLDF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR ETE+LV+ A+     R++K     ILDL TG+G + ++++K S    G+
Sbjct: 87  YINEDVLIPRYETEVLVEEAIK----RVKKG---VILDLCTGSGCIPISVMKNSGIDFGI 139

Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           GVDIS  AL++AK+N     +S++      FD L+ D     +  FD+I  NPPY++   
Sbjct: 140 GVDISFNALKVAKANK-KRLLSDKKLKFVCFDVLEIDKIFKDKIEFDLITCNPPYVD--- 195

Query: 180 VDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  E  D   ++P  +L    +GL  Y+ +   + +   K+G    EI  + K+D++
Sbjct: 196 ---INGEYEDSIMYEPSEALFADDNGLKFYKKLLYKLPKLCKKNGFIIFEIPCD-KLDMI 251

Query: 237 R-IFESRKLFLVNAFKDYGGNDRVLLF 262
           + IF  + + LV   KD  G +RVL++
Sbjct: 252 KNIFYGKDIELV---KDLSGKERVLIW 275


>gi|116625720|ref|YP_827876.1| HemK family modification methylase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228882|gb|ABJ87591.1| modification methylase, HemK family [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 272

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 93/186 (50%), Gaps = 21/186 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++FY+    ++ D   PRPETE +V++AL  +      R   R+LD+GTG+GA+ + L  
Sbjct: 77  QEFYSREFRVTPDVLIPRPETEHVVEAALEVA------RGAKRVLDVGTGSGALAITLRL 130

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSN 171
           E    +    DIS +A  +A  NA   G +  F      D + +D         ++IVSN
Sbjct: 131 EM-GTEAWATDISAEAATVAAGNAARLGANVHFAVCDLMDAIAAD-------SMNLIVSN 182

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+     + L  EVRDF+P ++L GG  G   Y  I     R L   G   +E+G+  
Sbjct: 183 PPYVPLAHREGLQREVRDFEPHVALFGGQTGFELYDRIVADAPRVLRPGGWLIMELGFT- 241

Query: 232 KVDVVR 237
            +D VR
Sbjct: 242 SLDHVR 247


>gi|227495019|ref|ZP_03925335.1| polypeptide chain release factor methyltransferase [Actinomyces
           coleocanis DSM 15436]
 gi|226831471|gb|EEH63854.1| polypeptide chain release factor methyltransferase [Actinomyces
           coleocanis DSM 15436]
          Length = 280

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 14/203 (6%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD  Q+  +   + R    E +  ILG   FY + L      F  RPETE LV++AL + 
Sbjct: 45  LDGDQQQLIEEMVTRRCNREPLAYILGKMWFYGLELKAEPGVFCVRPETETLVETALNWG 104

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
               +  + +  LDL +G+GA+ LAL    P ++  G++ S  AL  A+ NA   G+  R
Sbjct: 105 SSESKTAENLEALDLCSGSGAIALALQANLPNWQVTGLEQSSTALGNAQENAEKLGLPVR 164

Query: 150 FDT-----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGL 203
           F+      +   W S +     ++VSNPPYI    +         ++P  +L G G DG+
Sbjct: 165 FEQGDATVVNPQWRSKM----SLVVSNPPYIPPRTLPA----ETTYEPAAALWGFGEDGM 216

Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226
                I +    +L   GL  +E
Sbjct: 217 EIPAKIIEVAWEYLLPGGLFLME 239


>gi|313112841|ref|ZP_07798488.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624911|gb|EFQ08219.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 324

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 47/277 (16%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D VL   +   L     R  + E +  + G   F +  L +      PR +TE++ ++A 
Sbjct: 47  DRVLTTEEAEKLEALCTRREQREPLQYLCGIWSFLDFDLAVGPGVLCPRADTEVVAEAA- 105

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141
           A +L  I      R+LDL  GTG + L + +  P  +   V+ S +A    + N      
Sbjct: 106 ANTLTGIA---APRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPEAFVYLEKNCRCALK 162

Query: 142 ---------VTNGVSERFDTLQSDWFSSV----------------------------EGL 164
                    +     E+ D    DW  ++                            EG 
Sbjct: 163 GQGGQTEDLLEPTAFEQADAPAFDWGPALNALRAKAKPAYAVQPVEGDLFTYWQGLPEGQ 222

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D+IVSNPPY+ +  +  L  EV   +P ++L+ G DGL  YR +A+     L   G   
Sbjct: 223 LDLIVSNPPYLTAEEMRHLQPEVAQ-EPAMALEAGKDGLVFYRALAEHYQNALRPGGALV 281

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +EIG+ Q+  V  +  +     +   KD+GGNDR ++
Sbjct: 282 LEIGWQQRQAVAALLAANGWADIECRKDFGGNDRCMI 318


>gi|187918070|ref|YP_001883633.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           hermsii DAH]
 gi|119860918|gb|AAX16713.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           hermsii DAH]
          Length = 277

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 12/210 (5%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ + +  L  ++   L + I        I+ ILG ++F  ++  ++     PR +TE L
Sbjct: 35  ILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYINKHVLIPRADTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSN 140
           V+ AL     +I+K ++ RILDL  G+G  C+ L       + V + DIS KAL ++  N
Sbjct: 95  VEEALI----QIKKHNLNRILDLCCGSG--CIGLTIAYYLKRKVTLSDISTKALRVSLRN 148

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDG- 198
                +    +   SD    ++  F++I++NPPY+     D L ++ +   +PRI+L G 
Sbjct: 149 TQRLKLENYIEIQHSDLLKYIDKEFELIITNPPYLNK---DELKIKEKLAKEPRIALLGF 205

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           G DGL   + I       L K+GL  VE+ 
Sbjct: 206 GRDGLKIPKKIIIQAKHKLTKNGLLIVEMA 235


>gi|302185078|ref|ZP_07261751.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae 642]
          Length = 302

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 12/219 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81
           DS LD R      + + R +K     R+     LG   F  +   +      PR     L
Sbjct: 54  DSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWFCGMSFIVDDRVLIPRSPIAEL 113

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++   A  L      +  RILDL TG+G + +A  +  P  +    D+S  ALE+A  N 
Sbjct: 114 IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNI 169

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +G+ +R  T+Q D F  + G  FD+IVSNPPY+++     +  E +  +P ++L  G 
Sbjct: 170 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGS 228

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           DGL+  R +    + HL++ GL  VE+G N +V V  ++
Sbjct: 229 DGLNLVRRMLAQAADHLHEKGLLIVEVG-NSQVHVQALY 266


>gi|291444170|ref|ZP_06583560.1| methytransferase [Streptomyces roseosporus NRRL 15998]
 gi|291347117|gb|EFE74021.1| methytransferase [Streptomyces roseosporus NRRL 15998]
          Length = 266

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 28/231 (12%)

Query: 20  HQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           H+  V P   S+L +R+   L       L+H     +LGW +F+  R+ + +  F PR  
Sbjct: 35  HEAAVSPAELSLLAERRAAGL------PLEH-----VLGWAEFHGRRIAVDAGVFVPRRR 83

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV  A A +     +R VV  +DL  G+GA+ +AL            D+   A+  A
Sbjct: 84  TEFLVAQAAALA----PRRAVV--VDLCCGSGALGVALATALDRVDLHACDVEPAAVRCA 137

Query: 138 KSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + N     V +  +  + D F    + + G  DV+++N PY+ +  V+ L  E R  +PR
Sbjct: 138 RRN-----VGDLGEVYEGDLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPR 192

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++LDGG DGL   R +A      L   G   +E    Q+   V I  +  L
Sbjct: 193 VALDGGGDGLDVMRRVAAEAPAWLAPGGSLLMEASERQRDVAVEILRTAGL 243


>gi|297797429|ref|XP_002866599.1| methylase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312434|gb|EFH42858.1| methylase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 8/184 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WRD     L +      PRPETEL+VD      + R E        DLGTG+GA+ + + 
Sbjct: 152 WRDLV---LCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKGFWADLGTGSGAIAIGIA 207

Query: 117 KE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNP 172
           K      + +  D+S  A+ +A  N    G+    +  +  WF  ++GL      +VSNP
Sbjct: 208 KVLGSRGRVIATDLSPVAVAVAGKNVQRYGLEGMIEVREGSWFEPLKGLEGKLVGLVSNP 267

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  EV   +P+++LDGGIDG      +  G S+ L + G    E    ++
Sbjct: 268 PYIPSDDIPGLQAEVGKHEPKLALDGGIDGTDSLLHLCYGASQMLQRGGFFVFETNGEKQ 327

Query: 233 VDVV 236
             ++
Sbjct: 328 SKMI 331


>gi|296082794|emb|CBI21799.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLA 114
           WRD     L++      PRPETE+ VD          +  D+ + L  DLGTG+GA+ + 
Sbjct: 42  WRDLV---LSVQDGVLIPRPETEVFVDLVGDVV---TQNGDLTQGLWADLGTGSGAIAIG 95

Query: 115 LLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170
           + +   P  + +  D+S  A+ +A  N     + +  +  Q  WF     VEG    +VS
Sbjct: 96  IGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVS 155

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV   +PR++LDGG+DG+     + +G +  L   G    E    
Sbjct: 156 NPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGE 215

Query: 231 QK----VDVVRIFESRKLFLVNAFKDYGGNDR 258
           ++    VD +        + V    D+ G  R
Sbjct: 216 KQCKFLVDYMENESKGNFYDVKIVPDFAGIQR 247


>gi|330986203|gb|EGH84306.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 302

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 7/187 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++   A  L      +  RILDL TG+G + +
Sbjct: 86  LLGEAWFCGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGI 141

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A  +  P  +    D+S  ALE+A  N   +G+ +   T+Q D F  + G  FD+IVSNP
Sbjct: 142 ACAEVFPEAEVALADLSYDALEVANQNIERHGMEDHVYTVQGDGFDGLPGQRFDLIVSNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E +  +P ++L  G DGL+  R +    + HLN+ GL  VE+G N +
Sbjct: 202 PYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVG-NSQ 259

Query: 233 VDVVRIF 239
           V V  ++
Sbjct: 260 VHVQALY 266


>gi|225462209|ref|XP_002269180.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 356

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 16/212 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLA 114
           WRD     L++      PRPETE+ VD          +  D+ + L  DLGTG+GA+ + 
Sbjct: 144 WRDLV---LSVQDGVLIPRPETEVFVDLVGDVV---TQNGDLTQGLWADLGTGSGAIAIG 197

Query: 115 LLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170
           + +   P  + +  D+S  A+ +A  N     + +  +  Q  WF     VEG    +VS
Sbjct: 198 IGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVS 257

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV   +PR++LDGG+DG+     + +G +  L   G    E    
Sbjct: 258 NPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGE 317

Query: 231 QK----VDVVRIFESRKLFLVNAFKDYGGNDR 258
           ++    VD +        + V    D+ G  R
Sbjct: 318 KQCKFLVDYMENESKGNFYDVKIVPDFAGIQR 349


>gi|145596154|ref|YP_001160451.1| HemK family modification methylase [Salinispora tropica CNB-440]
 gi|145305491|gb|ABP56073.1| modification methylase, HemK family [Salinispora tropica CNB-440]
          Length = 309

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D R+RF     + R    E +  + G   F ++ L +    F PRPETELL      + +
Sbjct: 61  DQRRRF--DALVARRADREPLQHLTGSAPFRHLELAVGPGVFVPRPETELLA----GWGV 114

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSER 149
            +  +     ++DL +G+GA+ LA+ +E P  + V V+ S  AL   + NA +   V +R
Sbjct: 115 EQARREAAPLVVDLCSGSGAIALAVAQEVPAARVVAVEGSPAALSWLRRNATSRAAVGDR 174

Query: 150 ------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                  D   SD    + G  DV++ NPPY+ + +V  +  EV   DP  ++  G+DGL
Sbjct: 175 PVEVVAADVTASDLLDDLLGRVDVLLCNPPYVPAGVV--VPPEVSRHDPARAVFAGMDGL 232

Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226
           +  R +    +  L   G   +E
Sbjct: 233 AVIRPVVPRAAVLLRPGGRLGIE 255


>gi|313157194|gb|EFR56624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alistipes sp. HGB5]
          Length = 280

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%), Gaps = 19/230 (8%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           ++GLS+  ++ DP + L+  +   L + + +      +  ++G  +F      +      
Sbjct: 35  LSGLSASALLTDPGAPLEIAE---LDDILGQLAAGRPVQYVVGRTEFCGRTFAVHEGVLI 91

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE L  + +A +     K +   +LD+GTG+G +   L    P  +    DIS  A
Sbjct: 92  PRPETEELA-AWIAQA-----KTEAATLLDVGTGSGCIAATLALALPGAQVYAADISDTA 145

Query: 134 LEIAKSN--AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           LE A  N  A+  GV  R     SD      G FDVIVSNPPY+    +  + + VR+++
Sbjct: 146 LETAARNCRALGAGVILRKADALSDLAEVFPGPFDVIVSNPPYVPQSDLPAMHVNVREYE 205

Query: 192 PRISL----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           P  +L    D   D L  YR IA    R L   G    EI Y +  + +R
Sbjct: 206 PHEALLVPDD---DPLRFYRAIARAGRRTLRPGGRLYFEI-YERFAEAMR 251


>gi|239940731|ref|ZP_04692668.1| putative methylase [Streptomyces roseosporus NRRL 15998]
 gi|239987209|ref|ZP_04707873.1| putative methylase [Streptomyces roseosporus NRRL 11379]
          Length = 263

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 28/231 (12%)

Query: 20  HQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           H+  V P   S+L +R+   L       L+H     +LGW +F+  R+ + +  F PR  
Sbjct: 32  HEAAVSPAELSLLAERRAAGL------PLEH-----VLGWAEFHGRRIAVDAGVFVPRRR 80

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV  A A +     +R VV  +DL  G+GA+ +AL            D+   A+  A
Sbjct: 81  TEFLVAQAAALA----PRRAVV--VDLCCGSGALGVALATALDRVDLHACDVEPAAVRCA 134

Query: 138 KSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + N     V +  +  + D F    + + G  DV+++N PY+ +  V+ L  E R  +PR
Sbjct: 135 RRN-----VGDLGEVYEGDLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPR 189

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++LDGG DGL   R +A      L   G   +E    Q+   V I  +  L
Sbjct: 190 VALDGGGDGLDVMRRVAAEAPAWLAPGGSLLMEASERQRDVAVEILRTAGL 240


>gi|327265759|ref|XP_003217675.1| PREDICTED: hemK methyltransferase family member 1-like [Anolis
           carolinensis]
          Length = 430

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 108/239 (45%), Gaps = 21/239 (8%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDV 98
            + L+   +  +LG  DF ++ L +    F PR ETE    L+VD      LP  + ++ 
Sbjct: 185 AKRLQRMPVQYVLGEWDFQDLTLKMKPPVFIPRRETEELVTLVVDEECRKRLPSSDCKEP 244

Query: 99  --------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     IL++G G+GA+ L+LLK+ P  K + +D    A+ + K NA    + ER 
Sbjct: 245 RLPPETHGPVILEVGCGSGAIALSLLKKLPHSKVIAIDKLEAAVNLTKENAERLNLQERV 304

Query: 151 DTLQSDWFSS------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             L  +  SS        GL D I+SNPPY+    +  L  E+  ++   +LDGG DG++
Sbjct: 305 SVLHHEVSSSSWKYLLPWGLVDTIISNPPYVFHEDMTHLATEIHSYEDLGALDGGSDGMN 364

Query: 205 HYRTIADGVSRHLNKDG--LCSVEIGYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260
             R I       L   G     VE  + + V + +R      L +    KD+ G  R L
Sbjct: 365 IIREILHLACYLLKDYGSVFLEVEPRHPEMVKNWLRGHPDLSLVVCGTHKDFCGKLRFL 423


>gi|325681464|ref|ZP_08160990.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 8]
 gi|324106954|gb|EGC01244.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 8]
          Length = 292

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 9/199 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + +  E +  +LG  +FY + L +      PR +TE L D A+A    + +K D + + D
Sbjct: 66  KRVNGEPLQYLLGEWEFYGLTLKVGKGVLIPRQDTETLADLAVA----KYKKTDNIVVAD 121

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSS 160
           L +G+G + LAL K     +   V+ S  A    K N   N  + +    D L SD  + 
Sbjct: 122 LCSGSGCIALALEKHLKCREVWAVEKSEAAAGYLKDNLALNHSAVKLVMGDVLDSDTANK 181

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +    D+IV NPPY+ +  +  L  EV   +P+ +L GG DGL  YR +       L + 
Sbjct: 182 IPAA-DLIVCNPPYLTADDMAALQTEVT-HEPKEALYGGEDGLDFYRAVTRIWKDRLKQG 239

Query: 221 GLCSVEIGYNQKVDVVRIF 239
           G    EIG  Q+ DV++I 
Sbjct: 240 GTLIYEIGAGQEDDVMQIM 258


>gi|110635204|ref|YP_675412.1| HemK family modification methylase [Mesorhizobium sp. BNC1]
 gi|110286188|gb|ABG64247.1| modification methylase, HemK family [Chelativorans sp. BNC1]
          Length = 234

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 9/211 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L L+ D   PR ETELL  SA+   L  +    +V  +D+  G+G + L +    
Sbjct: 23  FMGIELELAPDVLVPREETELLGRSAVDL-LKGMAGSPIV--IDMCCGSGNLALGIAAAV 79

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174
           P  +    D++   + +A+ NA   G+ +R   +Q D FS +     EG  D +VSNPPY
Sbjct: 80  PAARLWASDLTESTVSLARRNAERLGLLDRVKVVQGDLFSGLADEGLEGRVDFVVSNPPY 139

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++     + + +PR + DGG  GLS ++ +       L + G  + E G  Q+  
Sbjct: 140 ISTSRLETDRAHLLENEPREAFDGGPYGLSIHQRLVREAPTFLKRGGWLAFEFGEGQERQ 199

Query: 235 VVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264
           V  + +   ++    F  D  G  RV +  R
Sbjct: 200 VAILLKRAGMYEEPRFASDQAGKPRVAIARR 230


>gi|302529794|ref|ZP_07282136.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
 gi|302438689|gb|EFL10505.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
          Length = 288

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 16/226 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + +  K   +  + GW    N+ + + +  F PRPETELL++  + F    ++ R+   +
Sbjct: 62  VAQRAKRIPLQYLTGWAALGNITVNVGAGVFVPRPETELLLEWGVKF----LQGREYPVV 117

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTLQ 154
           +DL TG+GA+ LA+  E P      VD+  +AL  A+ NA  +  +          D   
Sbjct: 118 VDLCTGSGALALAVAHERPDAVVYAVDVDPQALAWARHNADVHSAAGNTPIRLYSGDIAD 177

Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F+ ++GL D+++ NPPY+ E   V     EV + DP  ++     GL+  R      
Sbjct: 178 PTMFAELDGLVDLVLCNPPYVPEGTPVPP---EVGEHDPARAVFAEESGLAVIRHAIAAG 234

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           +R L   G  ++E        V  +  +R++   V    DY G  R
Sbjct: 235 ARLLRPGGGLAIEHDDTHGSAVPALVRARRVLTGVEDHPDYTGRAR 280


>gi|70731701|ref|YP_261443.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens Pf-5]
 gi|68346000|gb|AAY93606.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5]
          Length = 302

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 9/147 (6%)

Query: 93  IEKR-------DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           IEKR       +  RILDL TG+G + +A   E    + V  D+S +ALE+A  N   +G
Sbjct: 114 IEKRFEPWLGSEPARILDLCTGSGCIGIACAYEFRDAEVVLADLSFEALEVANQNIERHG 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V ER  T+Q D F  + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL+
Sbjct: 174 VDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGEDGLN 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             R +    + HL + GL  VE+G +Q
Sbjct: 233 LVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|315503944|ref|YP_004082831.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Micromonospora sp. L5]
 gi|315410563|gb|ADU08680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora sp. L5]
          Length = 296

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 13/200 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QR  L   + R +  E +  +LG   F ++ L +    F PRPETELL      + + R 
Sbjct: 46  QRDRLDALVGRRVTREPLQHLLGSAGFRHLELAVGPGVFVPRPETELLA----GWGIERA 101

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----- 148
            +     ++DL +G+GA+ LA+ +E P  + V V+ S  AL   + N      +      
Sbjct: 102 REHAAPLVVDLCSGSGAIALAVAQEVPAARVVAVERSPAALAWLRRNVAGRAAAGDRPVE 161

Query: 149 --RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               D    D  + + G  DV++ NPPY+   +   +  EV   DP  ++ GG DGL   
Sbjct: 162 VVAADVTDPDLLADLAGRVDVLLCNPPYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVI 219

Query: 207 RTIADGVSRHLNKDGLCSVE 226
           R +    +  L   G   +E
Sbjct: 220 RPVVGRAAALLRPGGAIGIE 239


>gi|66547731|ref|XP_393324.2| PREDICTED: hemK methyltransferase family member 1-like isoform 1
           [Apis mellifera]
          Length = 349

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 25/237 (10%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L    I  I+G  DF ++ L L    F PRPETE+LV   L     +    +   IL++G
Sbjct: 111 LSRMPIQYIIGEWDFCDITLKLVPPIFIPRPETEILVHYILKAL--KSSDNNKQEILEIG 168

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVE- 162
            G+GA+ LA+   +     + +D + +A E+ K N     + +R   + +      S+E 
Sbjct: 169 CGSGAISLAIAHANKTVHCIAIDSNPEACELTKKNRDKLNLKDRISVVHATLKDNGSIEI 228

Query: 163 ---------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                           +FD IVSNPPYI +  +  L  E++ ++   + DGG DGL   +
Sbjct: 229 SNESKNESKNLDLNSKIFDFIVSNPPYIPTKQISTLIPEIKIYEDLTAFDGGDDGLKVIK 288

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
            +    +  L   G   +E+      + ++ F  +    KL   + +KD+  NDR +
Sbjct: 289 PLLKYAAIALKPGGRLFLEVDTTHP-EYIQFFTKKYPILKLQYEHTYKDFCNNDRFI 344


>gi|160872888|ref|ZP_02063020.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rickettsiella grylli]
 gi|159121687|gb|EDP47025.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rickettsiella grylli]
          Length = 314

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 6/166 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR     L+ S L    P IE  + +  ILDLGTG+G + +A     P  +   VD S  
Sbjct: 120 PRSPIAELIQSELN---PWIENTKKIHTILDLGTGSGCIAIACAYAFPEARVDAVDHSKD 176

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL++A  N   +    + + + SD+F +++   +D+I+SNPPY+++    CL LE R  +
Sbjct: 177 ALKVAAVNVKIHKRQGQINLIYSDFFQNLKRRRYDIIMSNPPYVDAEDFMCLPLEYRH-E 235

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           PR +L  G DGL     I     ++L + G+  VE+G ++   + R
Sbjct: 236 PRAALAAGKDGLDGVIQILKEAKKYLKEKGILIVEVGNSKNALIKR 281


>gi|254240024|ref|ZP_04933346.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192]
 gi|126193402|gb|EAZ57465.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192]
          Length = 304

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +R  L   + R ++       +LG   F  +  ++      PR     L++  
Sbjct: 58  DCRLEDDERAELAEILRRRIEERIPAAYLLGEAWFCGIPFSVDEGVPVPRSPIAELIEQR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  LP     +  RILDL TG+G + +A        + V  D+S  ALE+A  N   + 
Sbjct: 118 FAPWLPA----EPARILDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERHD 173

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ER  T+Q D F+ + G  FD+IVSNPPY+++     +  E    +P + L  G DGL 
Sbjct: 174 LGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAEDFADMPAEFH-HEPELGLACGDDGLD 232

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             R +    + HL++ GL  VE+G N +V V  ++
Sbjct: 233 LVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266


>gi|331000680|ref|ZP_08324332.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Parasutterella excrementihominis YIT 11859]
 gi|329570833|gb|EGG52548.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Parasutterella excrementihominis YIT 11859]
          Length = 299

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + + L ++ P  +   VDIS  ALE+A+ N        R   +QSD F +
Sbjct: 134 ILDMCTGSGCLAILLAEKFPQAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFEN 193

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++   +D+I+SNPPY+    ++ L  E R ++P ++L  G DG+     +   V  HLN 
Sbjct: 194 LQNTKYDLIISNPPYVTEASMEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLND 252

Query: 220 DGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
           +G+  VE+G     D    F+ R     V      GG D+V +  +
Sbjct: 253 NGVLIVELG-----DGAENFKERFPNIEVTWLPTSGGKDQVFMIKK 293


>gi|171059200|ref|YP_001791549.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leptothrix cholodnii SP-6]
 gi|170776645|gb|ACB34784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Leptothrix cholodnii SP-6]
          Length = 319

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 5/165 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P     G D+S  AL++A+ N   + + ER   L SD   
Sbjct: 155 RVLDLCTGNGSLAVLAAMAYPDVVVDGADLSHDALDVARINVQRHQLGERITLLHSDGLK 214

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           SV G +D+I+ NPPY+ +  +  L  E +  +P ++L GG DG+   R +   + ++L  
Sbjct: 215 SVNGPYDLILCNPPYVNAQSMAALPPEFK-AEPELALAGGADGMDFIRALLADLPKNLTP 273

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G+  +EIG+ +            ++L    +   G+D+VLL  R
Sbjct: 274 HGVLVLEIGHERAHFEAAFPRLPAIWL----ETSAGSDQVLLLPR 314


>gi|71892272|ref|YP_278006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|71796378|gb|AAZ41129.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 304

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 6/170 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  ++  +    F PR     L+ S     LP        RILD+GTG+G + +A+    
Sbjct: 98  FCGLKFYVDKRVFIPRSPIGELITSCFNDLLPYYP----YRILDIGTGSGCIAVAIATVY 153

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  +   VDIS  AL++A+ N     +  R   + SD FS++  L +D+I++NPPY+++ 
Sbjct: 154 PKSEIDAVDISIDALKVAEHNIKLYNLEHRVFPIHSDLFSNLPQLKYDLIITNPPYVKNS 213

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +  L  E   ++P ISL    DGL   + I   V  HLN +G    E+G
Sbjct: 214 DIYKLPKEFH-YEPVISLSADNDGLKIIQKILMNVIHHLNTNGTLICEVG 262


>gi|301165961|emb|CBW25535.1| putative methyltransferase [Bacteriovorax marinus SJ]
          Length = 299

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 9/233 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +TN     +K   +  I G   FY     +S +   PR ETE+LV++A +F    ++  D
Sbjct: 64  ITNYFNSLVKGYPLEYIRGRAHFYKSEFDVSENVLIPRSETEILVETASSFLRDWMKMSD 123

Query: 98  V-VRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154
             +RILD+GTG+GA+ ++LL+E P   +    DIS  ALE+A+ N      +  R  +L+
Sbjct: 124 ERLRILDIGTGSGAIIISLLQEMPRPLEAFATDISKDALEVARRNYFNLRYTIPRESSLR 183

Query: 155 ---SDWFSSV-EGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSH-YRT 208
              +D  + + +  F +IVSNPPYI+     D +  +V +++P ++L    D     +RT
Sbjct: 184 LICTDRMNDLDQEKFHLIVSNPPYIKKREDRDFVHHQVDNYEPHLALYLEDDSYDEWFRT 243

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +   V   L ++G+  +E   +   D+  +        V   KDY   +R L+
Sbjct: 244 LFKQVLNSLYEEGIFIMEGHEDHLEDLCEVCNMIGFSTVKILKDYTNRNRFLV 296


>gi|298292309|ref|YP_003694248.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Starkeya novella DSM 506]
 gi|296928820|gb|ADH89629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Starkeya novella DSM 506]
          Length = 329

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 6/143 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           E   + R+LDL TG+G  CLA+L    F       VD+S  AL +A  N   + + +R  
Sbjct: 146 EPMAITRVLDLCTGSG--CLAILAAMIFPNAEVDAVDLSPDALALAAENVAEHEMGDRVR 203

Query: 152 TLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            ++ D F ++ G ++D+I++NPPY+++  +  L  E R  +P ++ DGG DGL   R I 
Sbjct: 204 LVEGDLFEALAGEVYDLIITNPPYVDAPAMAALPDEYR-HEPSLAFDGGPDGLDIVRRIL 262

Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233
               +HL+  G    EIG  +++
Sbjct: 263 TEAPKHLSAQGSLICEIGTGKEI 285


>gi|327480930|gb|AEA84240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas stutzeri DSM 4166]
          Length = 307

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 91/187 (48%), Gaps = 7/187 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L++      LP   KR    ILDL TG+G + +
Sbjct: 88  LLGQAWFCGLPFIVDERVLIPRSPIGELIEHRFEPWLPGTPKR----ILDLCTGSGCIGI 143

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           A   E    + V  DIS  ALE+A  N   +G+ ER  T+QSD F  +    FD+IVSNP
Sbjct: 144 ACAYEFLEAEVVLADISFDALEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNP 203

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+++     +  E    +P + L  G DGL   R +    + HL  DG+  VE+G N +
Sbjct: 204 PYVDAEDFADMPDEFH-HEPELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVG-NSQ 261

Query: 233 VDVVRIF 239
           V V  ++
Sbjct: 262 VHVQALY 268


>gi|303258045|ref|ZP_07344053.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderiales bacterium 1_1_47]
 gi|302859064|gb|EFL82147.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderiales bacterium 1_1_47]
          Length = 301

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + + L ++ P  +   VDIS  ALE+A+ N        R   +QSD F +
Sbjct: 136 ILDMCTGSGCLAILLAEKFPQAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFEN 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++   +D+I+SNPPY+    ++ L  E R ++P ++L  G DG+     +   V  HLN 
Sbjct: 196 LQNTKYDLIISNPPYVTEASMEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLND 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
           +G+  VE+G     D    F+ R     V      GG D+V +  +
Sbjct: 255 NGVLIVELG-----DGAENFKERFPNIEVTWLPTSGGKDQVFMIKK 295


>gi|323342351|ref|ZP_08082583.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463463|gb|EFY08657.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 283

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DV 98
           N I +    E +  +LG+  FY  +L ++     PR ETE LV   L+     I+   D 
Sbjct: 57  NKINQLTTDEPLGYVLGYEWFYGYKLFVNEGVLIPRSETEELVGHLLS----DIDAHFDT 112

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             I D+  G+GA+ +AL KE    K    DIS +ALE+A+ NA  N      + +Q D  
Sbjct: 113 PVIADVACGSGAIGIALAKELNL-KVYASDISEEALEVARRNADYNQAD--MEIMQGDML 169

Query: 159 SSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +       DV+  NPPYI++   + +   V + +P ++L GG DGL  YR + +    
Sbjct: 170 EPLIEKNIKLDVLACNPPYIKNT--EHIQTSVLNNEPHVALFGGEDGLFFYRKVFEKAHL 227

Query: 216 HLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNAFKDYGGNDRVLLFCR 264
            LN   + + EIG++    VV +    F   K+ L    +D  G DR++   +
Sbjct: 228 VLNDKAVMAFEIGFDIGEAVVALAQEFFSDAKIVLR---QDINGLDRMVFVYK 277


>gi|295111718|emb|CBL28468.1| HemK family putative methylases [Synergistetes bacterium SGP1]
          Length = 290

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 18/270 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           + A++++   LC    L+S +++  ++ + VL +     L   + R    E +  +LG  
Sbjct: 25  VNAVQEARWLLCDGLRLTSAELLAHLEREVVLPE----ALEAGVRRREAGEPLQYVLGTA 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF+     +      PR +TE+LV +AL  S          R     TG  A   +  + 
Sbjct: 81  DFWGRDFRVGPGVLVPRRDTEVLVRAALTSSR-------RTRPSRSWTGARAAPASPRRS 133

Query: 119 S---PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPP 173
           S   P  +G+  + S  AL  A  N     +S R   L +D     +V G  D+++SNPP
Sbjct: 134 SWSAPLARGILAERSPDALRWAAENLARWNLSSRARLLPTDAPEDIAVRGECDLLISNPP 193

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI    +  L  EVRD +P ++LDGG+DG+  YR +       L       +E G + + 
Sbjct: 194 YIPRGAIPRLMREVRDHEPHLALDGGVDGMDCYRALLASAPAWLKPGAFVILETGESDQA 253

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             +R    R      +F     +D  +L C
Sbjct: 254 RAIRDAVERSPDRAFSFLQRIADDSAILRC 283


>gi|269103134|ref|ZP_06155831.1| putative adenine-specific methylase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163032|gb|EEZ41528.1| putative adenine-specific methylase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 310

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 2/135 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K++  RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ ++   L+
Sbjct: 130 KQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISTDALAVAEQNIQDHGLEQQVTPLR 189

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD    V + L+D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I    
Sbjct: 190 SDLLRDVPKDLYDLIVTNPPYVDQEDMDNLPDEFR-HEPELGLAAGSDGLKLVRRILSNA 248

Query: 214 SRHLNKDGLCSVEIG 228
             +L +DG+   E+G
Sbjct: 249 PNYLKEDGVLICEVG 263


>gi|7705409|ref|NP_057257.1| hemK methyltransferase family member 1 [Homo sapiens]
 gi|18203634|sp|Q9Y5R4|HEMK1_HUMAN RecName: Full=HemK methyltransferase family member 1; AltName:
           Full=M.HsaHemKP
 gi|4589248|gb|AAD26417.1|AF131220_1 HEMK homolog [Homo sapiens]
 gi|5764550|gb|AAD51328.1|AF172244_1 HEMK homolog 7kb isoform [Homo sapiens]
 gi|12653971|gb|AAH00781.1| HemK methyltransferase family member 1 [Homo sapiens]
 gi|119585529|gb|EAW65125.1| HemK methyltransferase family member 1, isoform CRA_a [Homo
           sapiens]
 gi|123982676|gb|ABM83079.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|123982686|gb|ABM83084.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|123997355|gb|ABM86279.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|307684470|dbj|BAJ20275.1| HemK methyltransferase family member 1 [synthetic construct]
          Length = 338

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 103/229 (44%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D+IVSNPPY+    ++ L  E+R ++   +LDGG +G+     I     
Sbjct: 223 RSWTHLPWGPMDLIVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           R L   G   +E+       V    +SR    L LV   +D+ G  R L
Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331


>gi|222823580|ref|YP_002575154.1| modification methylase, HemK family [Campylobacter lari RM2100]
 gi|222538802|gb|ACM63903.1| modification methylase, HemK family [Campylobacter lari RM2100]
          Length = 267

 Score = 79.7 bits (195), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 15/251 (5%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC +       + ++P+  +D++  F   + + R L  E    +     FY         
Sbjct: 26  LCELLQKDKAWIFLNPEFQIDEKIFF---DYVDRFLNGEPFEYLFEKTQFYGFDFFTQKG 82

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ++E+L++  L      ++      IL++G G+G + ++L+K    F     DI+
Sbjct: 83  VLIPRFDSEILLERCLEI----LDHNSFNNILEIGFGSGILSISLVKLKQIFIQ-ACDIN 137

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            KAL +AK NA  + VS   +    D F +++G FD I SNPPY+++     L   V++ 
Sbjct: 138 PKALNLAKKNADFHNVSNLINFQLCD-FKNMQGEFDFIFSNPPYVKNDYP--LDKWVQN- 193

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L GG  G      I      H  K   C  E GY+QK  + +I E    F    +
Sbjct: 194 EPYDALFGGDKGWEILEEIIIFAKNHNTKVLAC--EFGYDQKAILNKILEENN-FKATFY 250

Query: 251 KDYGGNDRVLL 261
           +DY G DR  +
Sbjct: 251 QDYNGFDRAFV 261


>gi|74317288|ref|YP_315028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thiobacillus denitrificans ATCC 25259]
 gi|74056783|gb|AAZ97223.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
          Length = 308

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 12/178 (6%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  D V  +LDL TG+G  CLA+L    F       VD+S  AL +A  N     + 
Sbjct: 124 PWVEDADAVEDVLDLCTGSG--CLAVLAALAFPSADVDAVDLSQDALAVAARNVADYDLD 181

Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R   ++SD F+++ G  +D+I+SNPPY+++  V  L  E R  +P ++L  G DGL   
Sbjct: 182 ARIALIESDLFATLGGRRYDLIISNPPYVDAAAVAALPAEYR-AEPALALGSGEDGLDAT 240

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      HL   GL  VEIG+N+        E+    L   + D  G D+ +   R
Sbjct: 241 RKILAAAGDHLKPGGLLVVEIGHNRDA-----LEAAYPALPFTWLDTEGGDQFVFMLR 293


>gi|167751821|ref|ZP_02423948.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
 gi|167660062|gb|EDS04192.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
          Length = 282

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 15/229 (6%)

Query: 16  GLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           GL    ++ +PD  L  ++  R     A  R L++     +LG  +FY +   +      
Sbjct: 37  GLCLTDLVAEPDKELGINELDRIIGELAAGRPLQY-----VLGHTEFYGLDFQVREGVLI 91

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE LV        P     D   +LD+GTG+G + + L +  P  +   VDIS KA
Sbjct: 92  PRPETEELVRWIAESPAP-----DNPAVLDVGTGSGCIAVTLARLIPGARVTAVDISEKA 146

Query: 134 LEIAKSNA--VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           L IA+ NA  +   V  R      + F      FD+IVSNPPYI       + + V  ++
Sbjct: 147 LSIARENARRLDAEVDFRQGDALGELFPGQREQFDLIVSNPPYIPRREKASMRVNVTGYE 206

Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           P  +L     D L  YR IA    R L   G    EI  N   + +R+ 
Sbjct: 207 PAEALFVEDDDPLIFYRAIARNARRLLRPGGRLYFEIHENFADETLRML 255


>gi|91975757|ref|YP_568416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisB5]
 gi|91682213|gb|ABE38515.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB5]
          Length = 330

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 6/139 (4%)

Query: 98  VVRILDLGTGTGAVCLALL--KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L  +  P  +   VD+S  AL +A  N   +GV ER      
Sbjct: 165 VERVLDLCTGSG--CLAILAARNFPHAEIDAVDLSKDALAVAAKNVADHGVGERLTLHHG 222

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + F+ + E  +D+I++NPPY+++  +  L  E R  +P ++ DGG DGL   R I D   
Sbjct: 223 NLFAPLGEARYDLIITNPPYVDAEGMASLPAECRA-EPAMAFDGGDDGLDIIRRILDEAK 281

Query: 215 RHLNKDGLCSVEIGYNQKV 233
            HL  DG    E+G  + +
Sbjct: 282 DHLTPDGGLLCEVGRGRAL 300


>gi|170727358|ref|YP_001761384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella woodyi ATCC 51908]
 gi|169812705|gb|ACA87289.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella woodyi ATCC 51908]
          Length = 314

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R+LDL TG+  + +A   E    +   +DIS  ALE+A+ N  T GV +R 
Sbjct: 127 PWLYNKPVNRVLDLCTGSACIAIACAYEFDEAEVDALDISEDALEVAQINIETLGVMDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             ++S+ FS++     +D+IVSNPPY+++  +D +  E    +P I L  G DGL   + 
Sbjct: 187 FPIESNLFSAIPKGPHYDLIVSNPPYVDAEDIDDMPEEYH-HEPEIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + +L +DGL  VE+G N  V +   F       V+   ++GG D V +  R
Sbjct: 246 ILANAADYLTEDGLLVVEVG-NSMVHLAEQFPDVPFTWVSF--EHGG-DGVFVLTR 297


>gi|312139168|ref|YP_004006504.1| sam dependent methyltransferase [Rhodococcus equi 103S]
 gi|325673527|ref|ZP_08153218.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|311888507|emb|CBH47819.1| SAM dependent methyltransferase [Rhodococcus equi 103S]
 gi|325555548|gb|EGD25219.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 297

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 32/257 (12%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +VDP SV+++ +       + R ++   +  I G     NV L +    F PRPETELL+
Sbjct: 49  LVDP-SVIEEYREL-----VARRVQRIPLQHITGSTAMGNVSLEVGPGVFVPRPETELLL 102

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS--- 139
             ALA       +  VV  LDL TGTGA+ LA+    P      V++  +AL  A+    
Sbjct: 103 AWALAHLEASGLRAPVV--LDLCTGTGALALAIAHARPDAVVHAVELQPQALAWARRNAD 160

Query: 140 ----------NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVR 188
                     N V   V++R         + +EG  D++VSNPPYI E  ++D    EV 
Sbjct: 161 RRRDAGDTPINLVQGDVTDRA------LLTELEGGVDLVVSNPPYIPEGAVLDP---EVA 211

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LV 247
           D DP  +L GG DGLS  + + + ++R L   G   +E        V  +F +R++F  V
Sbjct: 212 DHDPHTALFGGADGLSVIKPMINNIARWLRIGGAVGIEHDDTNGDQVAELFRARRVFDRV 271

Query: 248 NAFKDYGGNDRVLLFCR 264
               D  G  R ++  R
Sbjct: 272 VEHPDLAGRPRFVVAHR 288


>gi|226954021|ref|ZP_03824485.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|226835232|gb|EEH67615.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
          Length = 336

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 89  SLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           SLP   K +   RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +   
Sbjct: 147 SLPENPKPKTPQRILDMCTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQ 206

Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            +   L+SD FS +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL  
Sbjct: 207 YQVALLESDLFSKIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDL 265

Query: 206 YRTIADGVSRHLNKDGLCSVEIG 228
            R +    + +L +DGL  +E+G
Sbjct: 266 VRKMLAQAADYLTEDGLIVIEVG 288


>gi|146282674|ref|YP_001172827.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas stutzeri A1501]
 gi|145570879|gb|ABP79985.1| probable DNA methylase [Pseudomonas stutzeri A1501]
          Length = 307

 Score = 79.7 bits (195), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 85/167 (50%), Gaps = 7/167 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++      LP   KR    ILDL TG+G + +A   E    + V  DIS  A
Sbjct: 108 PRSPIGELIEHRFEPWLPGTPKR----ILDLCTGSGCIGIACAYEFLEAEVVLADISFDA 163

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           LE+A  N   +G+ ER  T+QSD F  +    FD+IVSNPPY+++     +  E    +P
Sbjct: 164 LEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNPPYVDAEDFADMPDEFH-HEP 222

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  G DGL   R +    + HL  DG+  VE+G N +V V  ++
Sbjct: 223 ELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVG-NSQVHVQALY 268


>gi|224534335|ref|ZP_03674913.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S]
 gi|224514437|gb|EEF84753.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S]
          Length = 277

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 12/208 (5%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  +++    + I    K   IH IL  ++F  +  TL+     PR +TE L
Sbjct: 35  IIANIKKSLTKKEKNLFFDHIDNIEKGTPIHYILRKKEFMGIEFTLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAK 138
           V+ AL     +I++    +ILDL  G+G + L++   +K+         DIS KAL+I  
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYMKKKIMLS----DISIKALQIVT 146

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N     +    + + S+    ++G  D+I++NPPY+    ++    +++    R  L  
Sbjct: 147 KNTKKLKLERFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEIKN-KIKKEPSRALLGF 205

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           G DGL+  R I       LN +GL  +E
Sbjct: 206 GKDGLNISRKILSQAKEKLNPNGLIIIE 233


>gi|160942863|ref|ZP_02090102.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445764|gb|EDP22767.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii
           M21/2]
          Length = 323

 Score = 79.3 bits (194), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 112/277 (40%), Gaps = 47/277 (16%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D  L   Q   L     R    E +  + G   F +  L +      PR +TE++  +A 
Sbjct: 47  DRPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFLDFELAVGPGVLCPRADTEVVAQAA- 105

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----- 141
           A +L  I      R+LDL  GTG + L + +  P  +   V+ S  A    + NA     
Sbjct: 106 AETLAGIA---APRVLDLCAGTGCLGLGVKRFCPAAQVTCVEKSPAAFVYLEKNARCALT 162

Query: 142 ----VTNGVSE----------RFD-------------------TLQSD----WFSSVEGL 164
                T  V E           FD                    +Q+D    W +  EG 
Sbjct: 163 GQGRQTENVLEPSALEQEDAPTFDWGPALNALRASKKPAYAVQPVQADLFTYWETLPEGQ 222

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            ++IVSNPPY+ +  ++ L  EV   +P ++L+ G DGL  YR +A      L   G   
Sbjct: 223 LELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAGEDGLVFYRALAQHYKNALCPGGALV 281

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +EIG+ Q+  V  +        +   +D+GGNDR ++
Sbjct: 282 LEIGWQQREAVTALLAENGWADIRCIQDFGGNDRCVI 318


>gi|187477917|ref|YP_785941.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella avium 197N]
 gi|115422503|emb|CAJ49028.1| putative adenine-specific methylase [Bordetella avium 197N]
          Length = 296

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L HE+  R  G R + + R+ +      PR     L+D  LA  +   E   V R LD+ 
Sbjct: 89  LTHEAWLR--GHRFYVDQRVIV------PRSPIAELLDQGLAPWV--AEPESVGRALDMC 138

Query: 106 TGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           TG+G  CLA+L     P+ +   VDIS  AL++A+ N     + +R    +S+ F  +  
Sbjct: 139 TGSG--CLAILAALAFPYAEVDAVDISPDALDVAQRNVDEYRLQDRLRLHRSNLFDDLPA 196

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +DVIV NPPY+ S  +  L  E R  +P ++L GG DG+   R I     R+L+  G+
Sbjct: 197 AAYDVIVCNPPYVNSQSMSELPAEYR-AEPALALAGGADGMDLVRRILQAAPRYLSPQGV 255

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +EIG+ +        E   ++L         +D++LL  R
Sbjct: 256 LVLEIGHERDHFEAAFPELEPIWL----DTEDASDQILLLTR 293


>gi|153842021|ref|ZP_01993463.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio parahaemolyticus AQ3810]
 gi|149745421|gb|EDM56672.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio parahaemolyticus AQ3810]
          Length = 154

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGL-FDVIVS 170
           AL  E P  + +GVD+  +A E+A+ NA    +    FD  Q  WF  + EG  F +IVS
Sbjct: 1   ALASELPNRQVMGVDLKQEAKELAEYNAAQLNIKNVTFD--QGSWFEPIAEGTKFALIVS 58

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI+         +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+
Sbjct: 59  NPPYIDEKDPHLSQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYD 117

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q   V  I        V   KDYGGNDRV L C
Sbjct: 118 QGEAVREIMSGFGYQQVVTEKDYGGNDRVTLGC 150


>gi|255318967|ref|ZP_05360192.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SK82]
 gi|262378297|ref|ZP_06071454.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SH164]
 gi|255303984|gb|EET83176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SK82]
 gi|262299582|gb|EEY87494.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SH164]
          Length = 336

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   + +  +   ++SD FS
Sbjct: 159 RILDMCTGSGCIAIALAYAFPEAEVDATDISKEALEVAAINTEHHNMQYQVALMESDLFS 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLSQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|325922322|ref|ZP_08184099.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
 gi|325547177|gb|EGD18254.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
          Length = 286

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 104/221 (47%), Gaps = 7/221 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G R F+ + L +S+ T  PR +TE LV+     +L R +       
Sbjct: 64  VQRRQAGEPVAYLTGTRGFWTLDLAVSTATLIPRADTEALVE----LALERFDNMQGRCA 119

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+ LA+  E P  + +  D S  AL +A+ NA  + +    +     WF+ +
Sbjct: 120 ADLGTGSGAIALAIASERPHAQVIATDASAAALAVAQQNASRHQL-RNVECRLGYWFAPL 178

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+I SNPPYI +        ++R  +P  +L  G DGL   R I      HL   
Sbjct: 179 AGERFDLIASNPPYIAAHDPHLREGDLR-HEPASALASGPDGLDDIRLIVADAPMHLLPG 237

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   +E G++Q   V  +  +R    V   +D    DRV L
Sbjct: 238 GWLLLEHGWDQGTAVADLLRARGFEAVATHQDLEQRDRVTL 278


>gi|78048434|ref|YP_364609.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325928891|ref|ZP_08190054.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|78036864|emb|CAJ24557.1| putative HemK-family S-adenosyl-methionine-dependent
           methyltransferase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325540752|gb|EGD12331.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
          Length = 308

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFNGLGGRQYDLIVTNPPYVTNEETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|300727428|ref|ZP_07060837.1| modification methylase, HemK family [Prevotella bryantii B14]
 gi|299775308|gb|EFI71907.1| modification methylase, HemK family [Prevotella bryantii B14]
          Length = 275

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R  K E +  +LG  DFY     +      PRPET  L+D      +P++ ++    I
Sbjct: 58  IQRIEKGEPVQYVLGIADFYGRTFHVEPGVLIPRPETAELLDY-----IPKVNQKQT--I 110

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G + +    E    +    DIS KAL+IAK NA     +  F    +      
Sbjct: 111 LDIGTGSGCIAITASLEHTQAEVSAWDISPKALQIAKDNAQRLNATVDFHLQDALNAPDH 170

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKD 220
           +  +DVI+SNPPYI       +   V D++P ++L     D L  Y  IA    R L   
Sbjct: 171 QSCWDVILSNPPYIMDKERQNMEKNVLDYEPELALFVPDQDPLKFYTAIARYSVRALKPK 230

Query: 221 GLCSVEIG 228
           G+   EI 
Sbjct: 231 GILLFEIN 238


>gi|134094545|ref|YP_001099620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Herminiimonas arsenicoxydans]
 gi|133738448|emb|CAL61493.1| Modification methylase HemK [Herminiimonas arsenicoxydans]
          Length = 296

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 86/173 (49%), Gaps = 7/173 (4%)

Query: 91  PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P +   D +  IL+L TG+G + + L    P  +   VDIS  AL +A+ N     + +R
Sbjct: 122 PWVSNPDKITNILELCTGSGCLPIMLADAFPNAQVDAVDISADALAVARRNVDEYELQDR 181

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              ++SD ++ V E  +D+I++NPPY+ S  +  L  E    +P I+L GG DG+   R 
Sbjct: 182 ITLIESDLYTHVPENKYDLIITNPPYVNSTSMGKLPPEYLR-EPHIALAGGDDGMDLVRK 240

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           I  G  + L  +GL  VEIG N++      F    L  +       G+D V L
Sbjct: 241 IVAGAGKRLTPNGLLMVEIG-NERAYAEAAFPKLNLTWLTT---SAGDDMVFL 289


>gi|289669402|ref|ZP_06490477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 308

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|332668240|ref|YP_004451028.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332337054|gb|AEE54155.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 280

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 6/219 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L  + +  ILG  DFY ++  +      PRPETE LV+  L        +++   +LD+G
Sbjct: 60  LAGQPLQYILGQADFYGLKFKVDPRVLIPRPETEELVEWVLETIKTHYPQQNP-SVLDIG 118

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
           TG+G + + + K++P     G+D+S  AL +A+ NA  N V  ++   D L  + ++S+ 
Sbjct: 119 TGSGCIPITIAKKTPRATVWGLDVSAAALALAEENAHLNQVEVQWQEQDILNQEAWTSL- 177

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221
            +FD+I+SNPPYI       +  +V + +P ++L     D L  YR+IA     HL+  G
Sbjct: 178 PIFDLIISNPPYIPQREQVLMPAQVSNHEPHLALFVPDEDPLLFYRSIAAFAQIHLHPTG 237

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               E      ++V ++ E      V   +D  G  R L
Sbjct: 238 HLFFECNEYNALEVKQLLEEMGWSDVLLKEDLSGKLRHL 276


>gi|312149707|gb|ADQ29778.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi N40]
          Length = 286

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     LN +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLNPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|71736054|ref|YP_274042.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556607|gb|AAZ35818.1| modification methylase, HemK family [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320323461|gb|EFW79546.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329496|gb|EFW85488.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330879875|gb|EGH14024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 302

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/140 (36%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  
Sbjct: 129 ILDLCTGSGCIGIACAEVFPEAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDG 188

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + G  FD+IVSNPPY+++     +  E +  +P ++L  G DGL+  R +    + HLN+
Sbjct: 189 LPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELALACGSDGLNLVRRMLAQAADHLNE 247

Query: 220 DGLCSVEIGYNQKVDVVRIF 239
            GL  VE+G N +V V  ++
Sbjct: 248 KGLLIVEVG-NSQVHVQALY 266


>gi|325921318|ref|ZP_08183177.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
 gi|325548203|gb|EGD19198.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
          Length = 308

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|224534065|ref|ZP_03674648.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a]
 gi|224512764|gb|EEF83132.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a]
          Length = 286

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 95/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     LN +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLNPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|21553723|gb|AAM62816.1| unknown [Arabidopsis thaliana]
          Length = 377

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 5/194 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K    H ++G   + ++ L +      PRPETEL+VD      + R E      + +LGT
Sbjct: 151 KRRPFHYVVGCEHWRDLVLCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKGILANLGT 209

Query: 107 GTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---E 162
           G+GA+ + + K      + +  D+S  A+ +A  N     +    +  +  WF  +   E
Sbjct: 210 GSGAIAIGIAKVLGSRGRVIATDLSPVAIAVAGHNVHRYSLEGMIEVREGSWFEPLKDLE 269

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G    +VSNPPYI S  +  L  EV   +P+++LDGGIDG      +  G SR L   G 
Sbjct: 270 GKLVGLVSNPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSLFHLCHGASRMLQPGGF 329

Query: 223 CSVEIGYNQKVDVV 236
              E    ++  ++
Sbjct: 330 FVFETNGEKQSKMI 343


>gi|47229807|emb|CAG07003.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 219

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 16/163 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVC 112
           DF +V L +    F PRPETE LV+  L      +E R  V        L++G G+GA+ 
Sbjct: 11  DFRDVTLKMRPPVFIPRPETEELVELVLG----DLESRSWVGADTQQTCLEVGCGSGAIS 66

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV----- 167
           L+LL+  P  + + VD S  A+E+   NA   G+ +R      D   + E L  +     
Sbjct: 67  LSLLRSRPQLQVLAVDQSRDAVELTAENAGRLGLEDRLQVHHLDVMKAGETLLSLCGSVS 126

Query: 168 -IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            +VSNPPY+ S  ++ L  E+  F+   +LDGG DGL+  + I
Sbjct: 127 ALVSNPPYLFSEDMNSLEPEISRFEDHGALDGGEDGLNTIKQI 169


>gi|89093217|ref|ZP_01166167.1| Modification methylase HemK [Oceanospirillum sp. MED92]
 gi|89082513|gb|EAR61735.1| Modification methylase HemK [Oceanospirillum sp. MED92]
          Length = 309

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 118/236 (50%), Gaps = 9/236 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
            ++D    LD++ +  L+    R+++ + +  I G   F  +   +      PR     L
Sbjct: 64  AVLDGRLTLDEKTKV-LSYIQQRAVERKPLPYITGESWFCQLPFYVDERVLIPRSPIAEL 122

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++     +P + +  V R+LDL TG+G + +A        +    DIS  A+++A  N 
Sbjct: 123 IEAEF---VPWLREGPVERVLDLCTGSGCIGIACAYAFAEAEVDLADISKDAIDVAHMNI 179

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + ++ER   ++SD F +++G  +D+IVSNPPY+++  +  +  E  D +P ++L  G 
Sbjct: 180 EKHEMAERVHAIESDLFCNLKGKKYDLIVSNPPYVDADDLASMPEEY-DHEPELALGSGP 238

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           DGL   R I    + +L  DGL  VE+G N +V ++  F    +  +   +  GGN
Sbjct: 239 DGLDITRRILAEANDYLTDDGLLVVEVG-NSEVHMMEQFPELPIVWIEFQR--GGN 291


>gi|227546610|ref|ZP_03976659.1| HemK family modification methylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212927|gb|EEI80806.1| HemK family modification methylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 302

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + K  ++   +
Sbjct: 74  RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 129

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++    
Sbjct: 130 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 187

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG      
Sbjct: 188 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 246

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I +   R L   G+  +E    Q   +V    +      +  +D+ G DR L
Sbjct: 247 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 298


>gi|227501695|ref|ZP_03931744.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725]
 gi|227077720|gb|EEI15683.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725]
          Length = 277

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 22/213 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  +LG   F  + L +    F PRPETE++ D A       +      R++D
Sbjct: 62  RREQREPLQYVLGTAWFGPLELKVGPGVFIPRPETEVMADWA-------VHHAPGPRMVD 114

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE 162
           L +G+GA+ L L    P  +   V++S  ALE  ++N +  GV   + D   S   +   
Sbjct: 115 LCSGSGALALYLQHYVPQAEVKAVELSDAALEFTRANTLRTGVEVVQADATDSQALADWN 174

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++VSNPPY+       L  EV   DP +++ GG DG+   R +   ++R L   G+
Sbjct: 175 GTVDLVVSNPPYVPE--DPNLQPEVY-HDPHVAVFGGDDGMGVIRGLIPTIARLLRPGGV 231

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            ++E   +   D VR          +A +D+GG
Sbjct: 232 MAIEHD-DTTGDAVR----------DAVRDHGG 253


>gi|160903109|ref|YP_001568690.1| HemK family modification methylase [Petrotoga mobilis SJ95]
 gi|160360753|gb|ABX32367.1| modification methylase, HemK family [Petrotoga mobilis SJ95]
          Length = 268

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 15/183 (8%)

Query: 33  RQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
            Q F+    +V+ LK    I  I     F      ++ +   PR ETE LV   LA +L 
Sbjct: 46  EQTFYF---LVKHLKEGYPIEYITKKVSFLGNEFFVNENVLIPRIETEDLV--ILAINL- 99

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
            I+ +D+  ++D+GTG+G + +++ K+ P  K    DIS  A+++A+ NA   GV+  F 
Sbjct: 100 -IKNKDIKNVIDIGTGSGVIAISIKKQLPKIKVRASDISEDAIKVAQYNAEKLGVNIGFK 158

Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             D L  D F        +I+SNPPY+E+  V+        ++PRISLDGG DG S ++ 
Sbjct: 159 IGDCL--DPFLEEIDEVQLIISNPPYVETSFVE--KNRFLSYEPRISLDGGYDGQSFFKK 214

Query: 209 IAD 211
           I++
Sbjct: 215 ISN 217


>gi|289663180|ref|ZP_06484761.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 308

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPHEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|229591758|ref|YP_002873877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens SBW25]
 gi|229363624|emb|CAY50950.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 302

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 3/142 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDL TG+G + +A   E    + V  D+S +ALE+A  N   +GV ER  T+Q D F
Sbjct: 127 ARILDLCTGSGCIGIACAYEFQDAEVVLGDLSFEALEVANQNIERHGVDERVYTVQGDGF 186

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL+  R +    + HL
Sbjct: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQ-HEPELGLACGDDGLNLVRRMLAEAADHL 245

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
            + GL  VE+G N +V V  ++
Sbjct: 246 TEKGLLIVEVG-NSQVHVEALY 266


>gi|325915515|ref|ZP_08177826.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538231|gb|EGD09916.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 308

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|239621641|ref|ZP_04664672.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515516|gb|EEQ55383.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 302

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + K  ++   +
Sbjct: 74  RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 129

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++    
Sbjct: 130 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 187

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG      
Sbjct: 188 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 246

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I +   R L   G+  +E    Q   +V    +      +  +D+ G DR L
Sbjct: 247 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 298


>gi|213691479|ref|YP_002322065.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522940|gb|ACJ51687.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457552|dbj|BAJ68173.1| putative methylase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 294

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 23/248 (9%)

Query: 30  LDDRQRFF-LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +RF    + + R  K E +  I G   F  + L +    F PRPETE +V + L +
Sbjct: 51  LGTAERFARFQSMLARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW 110

Query: 89  SLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               + +  ++   ++DL  G+GA+ L+++ E P  +   V++S    E  + N   +  
Sbjct: 111 ----LTRNGMIHPCVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSET 164

Query: 147 SERFDTLQSDW------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++++ ++ S++             + ++G  D++++NPPY+    +     EVRD+DP +
Sbjct: 165 AKKYPSIASNYHLEIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPEL 223

Query: 195 SLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +L GG  DG      I +   R L   G+  +E    Q   +V   ++      +  KD+
Sbjct: 224 ALYGGSADGTLIPERIIERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDW 283

Query: 254 GGNDRVLL 261
            G DR L 
Sbjct: 284 TGRDRYLF 291


>gi|23466258|ref|NP_696861.1| methylase protein [Bifidobacterium longum NCC2705]
 gi|46190986|ref|ZP_00120803.2| COG2890: Methylase of polypeptide chain release factors
           [Bifidobacterium longum DJO10A]
 gi|189440752|ref|YP_001955833.1| methylase of polypeptide chain release factor [Bifidobacterium
           longum DJO10A]
 gi|312134005|ref|YP_004001344.1| hemk [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482078|ref|ZP_07941102.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|23327006|gb|AAN25497.1| possible methylase protein [Bifidobacterium longum NCC2705]
 gi|189429187|gb|ACD99335.1| Methylase of polypeptide chain release factor [Bifidobacterium
           longum DJO10A]
 gi|311773308|gb|ADQ02796.1| HemK [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916437|gb|EFV37835.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 294

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + K  ++   +
Sbjct: 66  RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++    
Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG      
Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I +   R L   G+  +E    Q   +V    +      +  +D+ G DR L
Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 290


>gi|322689792|ref|YP_004209526.1| methylase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461128|dbj|BAJ71748.1| putative methylase [Bifidobacterium longum subsp. infantis 157F]
          Length = 294

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + K  ++   +
Sbjct: 66  RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++    
Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG      
Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I +   R L   G+  +E    Q   +V    +      +  +D+ G DR L
Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 290


>gi|312962187|ref|ZP_07776679.1| modification methylase, HemK family [Pseudomonas fluorescens WH6]
 gi|311283524|gb|EFQ62113.1| modification methylase, HemK family [Pseudomonas fluorescens WH6]
          Length = 338

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 12/196 (6%)

Query: 43  VRSLKHESIHR------ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           V+ L H  IH       +LG   F  +   +      PR     L+++     L     +
Sbjct: 105 VQRLLHRRIHERVPTAYLLGEAWFCGMSFIVDKRVLIPRSPIGELIENRFEPWL----AQ 160

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              RILDL TG+G + +A   E    + V  D+S +ALE+A  N   +G  ER  T+Q D
Sbjct: 161 PPARILDLCTGSGCIGIACAYEFQDAEVVLGDLSFEALEVANQNIERHGADERVYTVQGD 220

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            F  + G  FD+IVSNPPY+++     +  E +  +P + L  G DGL+  R +    + 
Sbjct: 221 GFGGLPGQRFDLIVSNPPYVDAEDFADMPDEYQH-EPELGLACGDDGLNLVRRMLAEAAD 279

Query: 216 HLNKDGLCSVEIGYNQ 231
           HL + GL  VE+G +Q
Sbjct: 280 HLTEKGLLIVEVGNSQ 295


>gi|323343507|ref|ZP_08083734.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
           33269]
 gi|323095326|gb|EFZ37900.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
           33269]
          Length = 276

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 111/255 (43%), Gaps = 17/255 (6%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS   VI    + L       L   I R  K E +  ++G  +F N   +++     PR
Sbjct: 32  GLSWADVICGKVTQLGAENALLLQQMIGRLAKGEPVQYVMGRAEFANRIFSVTQGVLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PET  L       +    E  +   +LD+G G+G + + L         V  DIS +AL 
Sbjct: 92  PETAELC------AWITHETPEDATVLDVGCGSGCIAVTLALNIHGAHVVAWDISDEALH 145

Query: 136 IAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           IA+SNA    +  R D ++ D     + VE  +DV+VSNPPYI       +   V D++P
Sbjct: 146 IAESNA--QALHARVDIVRQDALIPPADVEK-WDVVVSNPPYICERERGAMARNVLDYEP 202

Query: 193 RISL---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             +L   D   D L  YR IA+  ++ L + G    E+      +V R+   +    + +
Sbjct: 203 DTALFVPDN--DPLLFYRAIAEYAAKALKRGGTLYFELNPLHADEVKRMLYEQHFAAIES 260

Query: 250 FKDYGGNDRVLLFCR 264
             D  G +R +   R
Sbjct: 261 RHDMFGKERFIKAIR 275


>gi|262368208|ref|ZP_06061537.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii
           SH046]
 gi|262315886|gb|EEY96924.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii
           SH046]
          Length = 336

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A+ N+  +    +   L+SD FS
Sbjct: 159 RILDMCTGSGCIAIALAYAYPDAEVDATDISKEALEVAQINSEHHDKQYQVALLESDLFS 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +      +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFH-HEPELALAAGQDGLDLVRKMLAQAPDYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|15237618|ref|NP_201220.1| methylase family protein [Arabidopsis thaliana]
 gi|10176963|dbj|BAB10283.1| unnamed protein product [Arabidopsis thaliana]
 gi|15451004|gb|AAK96773.1| Unknown protein [Arabidopsis thaliana]
 gi|30725624|gb|AAP37834.1| At5g64156 [Arabidopsis thaliana]
 gi|332010464|gb|AED97847.1| RNA methyltransferase family protein [Arabidopsis thaliana]
          Length = 377

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 12/186 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLA 114
           WRD     L +      PRPETEL+VD      + R E  K+D+    DLGTG+GA+ + 
Sbjct: 164 WRDLV---LCVEEGVLIPRPETELIVDMVEEL-VTRDEWFKKDI--WADLGTGSGAIAIG 217

Query: 115 LLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVS 170
           + K      + +  D+S  A+ +A  N     +    +  +  WF     +EG    +VS
Sbjct: 218 IAKVLGSRGRVIATDLSPVAIAVAGHNVQRYSLEGMIEVREGSWFEPLKDLEGKLVGLVS 277

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +  L  EV   +P+++LDGGIDG      +  G SR L   G    E    
Sbjct: 278 NPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSLFHLCHGASRMLQPGGFFVFETNGE 337

Query: 231 QKVDVV 236
           ++  ++
Sbjct: 338 KQSKMI 343


>gi|322691738|ref|YP_004221308.1| methylase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320456594|dbj|BAJ67216.1| putative methylase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 294

 Score = 79.0 bits (193), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--I 101
           R  K E +  I G   F  + L +    F PRPETE +V + L +    + K  ++   +
Sbjct: 66  RRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDW----LTKNGMIHPCV 121

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++    
Sbjct: 122 VDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHLEI 179

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG      
Sbjct: 180 ADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIPER 238

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I +   R L   G+  +E    Q   +V    +      +  +D+ G DR L
Sbjct: 239 IIERACRLLKPGGVLVMEHDVTQGDRLVAFASATGFAAASTGQDWTGRDRYL 290


>gi|170703465|ref|ZP_02894232.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria IOP40-10]
 gi|170131622|gb|EDT00183.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria IOP40-10]
          Length = 302

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ ER  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYGLDERIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     + L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293


>gi|306835872|ref|ZP_07468867.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens
           ATCC 49726]
 gi|304568237|gb|EFM43807.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens
           ATCC 49726]
          Length = 277

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 22/213 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  +LG   F  + L +    F PRPETE++ D A       +      R++D
Sbjct: 62  RREQREPLQYVLGTAWFGPLDLKVGPGVFIPRPETEVMADWA-------VHHAPGPRMVD 114

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE 162
           L +G+GA+ L L    P  +   V++S  AL+  ++N +  GV   + D   S   +   
Sbjct: 115 LCSGSGALALYLQHYVPQAEVKAVELSDAALDFTRANTLGTGVEVVQADATDSQTLADWN 174

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++VSNPPY+       L  EV   DPR+++ GG DG+   R +   ++R L   G+
Sbjct: 175 GTVDLVVSNPPYVPE--DPNLQPEVY-HDPRVAVFGGDDGMGVIRGLIPTIARLLRPGGV 231

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            ++E   +   D VR          +A +D+GG
Sbjct: 232 MAIEHD-DTTGDAVR----------DAVRDHGG 253


>gi|290561725|gb|ADD38260.1| HemK methyltransferase family member 1 [Lepeophtheirus salmonis]
          Length = 305

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 20/188 (10%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L    +  I+    F  + L +    F PRPETE ++D A+AF+ P+        +L++G
Sbjct: 75  LSRMPLQYIIKEWPFRGLNLQMRPPVFIPRPETEKIIDLAIAFN-PK-------SVLEIG 126

Query: 106 TGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFS-- 159
            G+GA+ + LL E P   + V VD S  A+++ K NA   + N    + + L +   S  
Sbjct: 127 CGSGAIAIGLLSECPSIQRCVAVDRSKMAVDLTKDNAKRLLGNQNQSKLEVLCNPINSGG 186

Query: 160 ----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +EG FD+++SNPPYI    +  +  E+  ++   +LDGG DGL   ++I   +S+
Sbjct: 187 TFEYPIEGPFDLVISNPPYILRKDLHNVEPEIGLYEDLRALDGGPDGLDVIKSIFSWISQ 246

Query: 216 H--LNKDG 221
              LN D 
Sbjct: 247 EGVLNSDS 254


>gi|294650372|ref|ZP_06727739.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823785|gb|EFF82621.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194]
          Length = 336

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 89  SLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           SLP   K +   RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +   
Sbjct: 147 SLPENPKPKTPQRILDMCTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQ 206

Query: 148 ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            +   L+SD F+ +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL  
Sbjct: 207 YQVALLESDLFAKIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDL 265

Query: 206 YRTIADGVSRHLNKDGLCSVEIG 228
            R +    + +L +DGL  +E+G
Sbjct: 266 VRKMLAQAADYLTEDGLIVIEVG 288


>gi|87122381|ref|ZP_01078262.1| probable DNA methylase [Marinomonas sp. MED121]
 gi|86162356|gb|EAQ63640.1| probable DNA methylase [Marinomonas sp. MED121]
          Length = 301

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 108/230 (46%), Gaps = 17/230 (7%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSL 90
           D ++  LT    R  K   +  +LG   F  +   ++ DT  PR P   LL D    +  
Sbjct: 69  DEKKSILTMLNERISKRTPLPYLLGEAWFMGLPFKVTKDTLIPRSPIMALLKDEFQPWL- 127

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVS 147
               K+  + ILD+ TG+G  CL +   +  F+   VDIS     AL++A+ N   + V 
Sbjct: 128 ----KQYPLNILDMCTGSG--CLGI-TAALIFEDAKVDISDISQAALDVARQNIEIHQVE 180

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           E  + +QSD F  + +  +D+I+ NPPY+++       LE    +P ++L  G DGL   
Sbjct: 181 ESVEAIQSDMFEKLLQRQYDLIICNPPYVDADDYQSAPLEFHR-EPELALTSGFDGLDFT 239

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           R   +  + HL+ DG+   E+G N ++ +   F       V    + GGN
Sbjct: 240 RKFLNQAAEHLHDDGIIVYEVG-NSEIALQDAFPDVPFMWVEL--EQGGN 286


>gi|332216070|ref|XP_003257165.1| PREDICTED: hemK methyltransferase family member 1 isoform 1
           [Nomascus leucogenys]
 gi|332216072|ref|XP_003257166.1| PREDICTED: hemK methyltransferase family member 1 isoform 2
           [Nomascus leucogenys]
 gi|332216074|ref|XP_003257167.1| PREDICTED: hemK methyltransferase family member 1 isoform 3
           [Nomascus leucogenys]
          Length = 338

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D++VSNPPY+    ++ L  E+R ++   +LDGG +G+     I     
Sbjct: 223 RSWTYLPWGPVDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           R L   G   +E+       V    +SR    L LV   +D+ G  R L
Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331


>gi|75676706|ref|YP_319127.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrobacter winogradskyi Nb-255]
 gi|74421576|gb|ABA05775.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 340

 Score = 78.6 bits (192), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + R+LDL TG+G  CLA+L    F        D+S  AL +A  N   +G+ +R    Q 
Sbjct: 170 LTRVLDLCTGSG--CLAILAARAFPNATVDATDLSADALAVAARNVREHGLDDRIQLAQG 227

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F++V G  +D+I+SNPPY+++  +  L  E    +PR++ DGG +G+   R I D   
Sbjct: 228 DLFAAVRGRRYDLIISNPPYVDAEGMAGLPRECL-VEPRMAFDGGTEGIDLVRRIIDRAE 286

Query: 215 RHLNKDGLCSVEIG 228
            HL   G    E+G
Sbjct: 287 THLAPGGGLLCEVG 300


>gi|114046986|ref|YP_737536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. MR-7]
 gi|113888428|gb|ABI42479.1| modification methylase, HemK family [Shewanella sp. MR-7]
          Length = 314

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+G + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY++   +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   G+  VE+G N  V ++  F       V+   ++GG D V +  R
Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297


>gi|328947854|ref|YP_004365191.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema succinifaciens DSM 2489]
 gi|328448178|gb|AEB13894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema succinifaciens DSM 2489]
          Length = 310

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 122/266 (45%), Gaps = 30/266 (11%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++   ++ L + Q+    ++I +      +  I G ++F+     +  +   P+P+TELL
Sbjct: 39  ILFHSETELSELQKNIFCSSIEKRKTGLPVAYITGIKEFFGSDFEVDKNVLIPKPDTELL 98

Query: 82  VDSALAFSLPRIEKRDVVRIL---DLGTGTGAVCLALLK---------ESPFFKGVGVDI 129
           V++A+ F   +       +IL   D+ +G+G V +++LK         +S   K +  DI
Sbjct: 99  VENAVNFIEEKFHASSDCKILSVCDMCSGSGCVGISILKFIEEKKIIPKSLLPKIIFADI 158

Query: 130 SCKALEIAKSNA---VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDC 182
           S K L+IAK N+   ++    E+   +QS+ F ++     GLFDVIVSNPPYI       
Sbjct: 159 SKKTLDIAKKNSLRLLSEFAFEKTVFVQSNLFENLGQSRNGLFDVIVSNPPYIPYSQTVE 218

Query: 183 LGLEVRDFDPRISLDGGI----------DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           L  + R  +P ++L G I          DGL   R +       LN  G+  +E G    
Sbjct: 219 LLKDGRS-EPSLALCGDIDLNGNLTNFDDGLEIIRNLIFQSVDFLNPGGILILETGEYNA 277

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDR 258
               +I E  +   V  +KD  G  R
Sbjct: 278 FQTKKIMEDSEFKDVKIYKDLEGQFR 303


>gi|315452642|ref|YP_004072912.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter felis ATCC 49179]
 gi|315131694|emb|CBY82322.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter felis ATCC 49179]
          Length = 277

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 10/184 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY+    +      PRPETELLV  A       I++  +  ++++G G+G V ++L  + 
Sbjct: 80  FYSRLFFVDERVLIPRPETELLVHQASEI----IQEYGIKNVIEVGIGSGVVAISLALQH 135

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
           P    +G DIS  ALE+A  N  T  +  R   + +     VE     ++VSNPPYI   
Sbjct: 136 PKINVMGTDISMDALEVASINITTFSLQSRVSLMHTSLLQGVEVSPRTLVVSNPPYIP-- 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +D    E   ++P I+L GG +G    + + D  +    K  +C  E+G NQK  +   
Sbjct: 194 -LDYPLDESVRYEPEIALYGGEEGDEILKALIDEAASKRVKFLIC--EMGDNQKASLSEH 250

Query: 239 FESR 242
            E R
Sbjct: 251 LEIR 254


>gi|189054214|dbj|BAG36734.1| unnamed protein product [Homo sapiens]
          Length = 338

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+  +LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISPSLLSQLPQSRVIAVDKREAAISLTHENAQRPRLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D+IVSNPPY+    ++ L  E+R ++   +LDGG +G+     I     
Sbjct: 223 RSWTHLPWGPMDLIVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           R L   G   +E+       V    +SR    L LV   +D+ G  R L
Sbjct: 283 RLLKDSGSIFLEVDPRHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFL 331


>gi|166712636|ref|ZP_02243843.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 308

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++      P +  R+V R LDL TG+G + +A+   +P +   GVDIS  A
Sbjct: 109 PRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNPQWDVDGVDISDDA 165

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P
Sbjct: 166 LALAVENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDETDALPQEY-SYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            + L  G DGL     I     +HL++DGL   E+G +++
Sbjct: 224 ELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ 263


>gi|54023022|ref|YP_117264.1| putative methyltransferase [Nocardia farcinica IFM 10152]
 gi|54014530|dbj|BAD55900.1| putative methyltransferase [Nocardia farcinica IFM 10152]
          Length = 290

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 96/197 (48%), Gaps = 20/197 (10%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVV 99
           I R  +   +  + G      + L +    F PRPETELL   ALA   +LP   +  V+
Sbjct: 62  IDRRAERVPLQHLTGVAAMGEIDLAVGPGVFVPRPETELLFAWALAHLETLPHDHQPIVI 121

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSD 156
              DL TG+GA+ LA+    P  +   V++   AL  A+ NA   + +G  +   TL +D
Sbjct: 122 ---DLCTGSGALALAIAHARPDAQVHAVELDPAALRWARRNADERIADG--DTPITLHAD 176

Query: 157 ------WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                   + + G  D++V+NPPYI E  ++D    EV D DP ++L GG DGL   R +
Sbjct: 177 DVTDPSLLTDLNGRVDLVVANPPYIPEGAVLDP---EVVDHDPHLALFGGADGLDVIRGM 233

Query: 210 ADGVSRHLNKDGLCSVE 226
              ++R L   G   +E
Sbjct: 234 VPTIARLLRPGGATGIE 250


>gi|291457339|ref|ZP_06596729.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM
           20213]
 gi|291381174|gb|EFE88692.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM
           20213]
          Length = 305

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 22/234 (9%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99
           + R  K E +  I G   F  + L +    F PRPETE +V   L +    + +  ++  
Sbjct: 75  LARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQVGLDW----LTRNGMIHP 130

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R++DL  G+GA+ L+++ E P  +   V++S    E  + N   +  ++++ ++ S++  
Sbjct: 131 RVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN--LSETAKKYPSIASNYHL 188

Query: 158 ----------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206
                      + ++G  D++++NPPY+    +     EVRD+DP ++L GG +DG    
Sbjct: 189 EIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQP-EVRDWDPELALYGGSMDGTLIP 247

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             I +   R L   G   +E    Q   +V    +      +  +D+ G DR L
Sbjct: 248 ERIIERACRLLKPGGALVMEHDVTQGDRLVAFARATGFAAASTGQDWTGRDRYL 301


>gi|113969757|ref|YP_733550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. MR-4]
 gi|113884441|gb|ABI38493.1| modification methylase, HemK family [Shewanella sp. MR-4]
          Length = 314

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+G + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY++   +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   G+  VE+G N  V ++  F       V+   ++GG D V +  R
Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297


>gi|299134251|ref|ZP_07027444.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Afipia sp. 1NLS2]
 gi|298590998|gb|EFI51200.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Afipia sp. 1NLS2]
          Length = 325

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    FF      VD+S  AL +A  N    G+ +R    + 
Sbjct: 159 VGRVLDLCTGSG--CLAILAAQTFFNATLDAVDLSKDALAVAAKNVADYGLEDRISLHKG 216

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + F+ +    +D+I+SNPPY+++  +  L  E R  +P+++ DGG DG+   R I +  +
Sbjct: 217 NLFAPLGNERYDLIISNPPYVDAEGMASLPPECR-HEPKLAFDGGADGIDIVRRIINEAA 275

Query: 215 RHLNKDGLCSVEIG 228
            HL  +G    E+G
Sbjct: 276 AHLTPNGGLLCEVG 289


>gi|297671241|ref|XP_002813754.1| PREDICTED: hemK methyltransferase family member 1-like [Pongo
           abelii]
          Length = 338

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D++VSNPPY+    ++ L  E+R ++   +LDGG +G+     I     
Sbjct: 223 RSWTHLPWGPVDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           R L   G   +E+       +    +SR    L LV   +D+ G  R L
Sbjct: 283 RLLKDSGSIFLEVDPRHPELISSWLQSRPDLYLNLVAVRRDFCGRPRFL 331


>gi|198273954|ref|ZP_03206486.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135]
 gi|198273032|gb|EDY97301.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135]
          Length = 280

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 103/227 (45%), Gaps = 10/227 (4%)

Query: 42  IVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           I+R LK  E +  IL    F      +      PRPETE LV+    + +    +   VR
Sbjct: 59  ILRRLKQREPLQYILQEASFCGRSFHVEQGVLIPRPETEELVE----WIVSDFREAGQVR 114

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG+G + ++L +  P  +    D+S +AL IA +N    G  ++     +D    
Sbjct: 115 ILDIGTGSGCIPVSLAQLLPEAQVSSCDVSAEALRIAATNVKRYG--DKVTLFCADILKE 172

Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHL 217
              E   DV+VSNPPYI       +   V D++P ++L     D L  YR IA      L
Sbjct: 173 ELPECQVDVLVSNPPYITESERTDMEANVLDWEPELALFVPDSDPLRFYRRIARKGLDWL 232

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++ G    EI      + +R+ E      +   KD  GNDR++   R
Sbjct: 233 SEGGALYFEINRAYGAETMRMLEELGYRQIELRKDLSGNDRMIKAIR 279


>gi|117919916|ref|YP_869108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. ANA-3]
 gi|117612248|gb|ABK47702.1| modification methylase, HemK family [Shewanella sp. ANA-3]
          Length = 314

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+G + +A   E    +   +DIS  AL++A+ N  T GV +R 
Sbjct: 127 PWLYGKPVNRILDLCTGSGCIAIACAYEFDEAEVDALDISEDALDVAQINVETLGVMDRV 186

Query: 151 DTLQSDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++ EG  +D+IVSNPPY++   +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPEGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    +++L   G+  VE+G N  V ++  F       V+   ++GG D V +  R
Sbjct: 246 ILANAAQYLTPTGILVVEVG-NSMVHLMEQFPEVPFTWVSF--EHGG-DGVFVLTR 297


>gi|229494562|ref|ZP_04388325.1| methytransferase [Rhodococcus erythropolis SK121]
 gi|229318924|gb|EEN84782.1| methytransferase [Rhodococcus erythropolis SK121]
          Length = 264

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 94/218 (43%), Gaps = 16/218 (7%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           R R  L   + R +  E +  +LGW +F  +R+ + S  F PR  TE L   A +   P 
Sbjct: 41  RSRDELDAMVDRRVAGEPLEPVLGWAEFCGLRIHIDSGVFVPRRRTEFLARQACSLVTPG 100

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                   ++D+  G+GAV + L           VD+   A+  A+ N     ++     
Sbjct: 101 ------SVVVDMCCGSGAVGVVLQSTLNAVDLYAVDVEPAAVRCARRN-----ITPPERV 149

Query: 153 LQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           L+ D F  +     G  DV+V+N PY+ +  +  +  E R  +P +SLDGG DGL   R 
Sbjct: 150 LEGDLFEPLPTKLLGRVDVVVANAPYVPTESIRLMPPEARLHEPLVSLDGGTDGLDLQRR 209

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           I    +  L   G   VE    Q    V  F +R  FL
Sbjct: 210 IIADAAPWLRPGGCLLVETSTEQVEMTVETF-TRGGFL 246


>gi|190575300|ref|YP_001973145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Stenotrophomonas maltophilia K279a]
 gi|190013222|emb|CAQ46856.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 309

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 13/148 (8%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV R LDL TG+G + +A+    P ++  GVD+S  AL +A+ N       ER 
Sbjct: 123 PWLAGRDVSRALDLCTGSGCIAIAMGHYYPNWEVDGVDLSDDALSLAEEN------KERL 176

Query: 151 DT-----LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                  L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P + L  G DGL 
Sbjct: 177 QAHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDETDALPQEY-SYEPEMGLRAGDDGLD 235

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               I      HL++DGL   E+G +++
Sbjct: 236 LVLKILRDAPLHLSEDGLLICEVGESEQ 263


>gi|303237986|ref|ZP_07324529.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella disiens FB035-09AN]
 gi|302481776|gb|EFL44828.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella disiens FB035-09AN]
          Length = 285

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 6/226 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLP--RIE 94
           L   ++R    E I  +LG   F   +  +      PRPETELL    + +   P   ++
Sbjct: 54  LEKIMLRLETGEPIQYVLGSARFCGRQFGVGKGVLIPRPETELLCQWVMESHDCPFCGLQ 113

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               +R+LD+GTG+G + + L  +         D+S  AL IA++NA+  G +  F    
Sbjct: 114 PPAPLRLLDIGTGSGCIAITLALDMANTVVSAYDLSSDALLIARNNAIRMGAAVNFQLKD 173

Query: 155 SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADG 212
           +   ++ E +FD+IVSNPPYI E+   + L   V +F+P  +L     D L  YR IA  
Sbjct: 174 ALEMTATEEMFDIIVSNPPYICENERTEMLP-NVLNFEPSTALFVPNDDPLRFYRAIAQY 232

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
               L+  G    EI  +   DV  +  +     +    D  G  R
Sbjct: 233 GQTALSHGGELYFEINEHYGEDVSTMLNTLGYVEIEVRNDQFGKQR 278


>gi|160888033|ref|ZP_02069036.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492]
 gi|156862532|gb|EDO55963.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492]
          Length = 247

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 103/242 (42%), Gaps = 12/242 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D +L  +    L + + R    E I  + G   F      ++     PRPETE LV+  L
Sbjct: 14  DMILSPKDEKELESILFRLCNFEPIQYVQGTARFLGRTFRVAPGVLIPRPETEELVERML 73

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P        RILD+GTG+G + + L KE P  +    DIS +AL IA  N      
Sbjct: 74  EEVAP------ASRILDIGTGSGCIAVTLSKELPEAEVTAWDISGEALAIAGDNNRLLQT 127

Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202
           S +F  +Q D   +  + +  FDVIVSNPPY+       +   V +++P  +L     D 
Sbjct: 128 SVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTETEKKDMEPNVLNWEPSGALFVPDSDP 185

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  YR I +     L   G    EI       V  +   +    V   KD  GNDR ++ 
Sbjct: 186 LRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASMLRKQGYTNVRIRKDISGNDRYVIA 245

Query: 263 CR 264
            R
Sbjct: 246 ER 247


>gi|154486887|ref|ZP_02028294.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis
           L2-32]
 gi|154084750|gb|EDN83795.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis
           L2-32]
          Length = 306

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 18/232 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +K E +  I G   F  + L +    F PRPETEL+V   + ++      R   ++
Sbjct: 72  LARRVKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKV 129

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----------- 150
           +DL  G+GA+ LA   E P  +   V+ S    E  + N   +  ++R+           
Sbjct: 130 VDLCAGSGAIGLAFASEVPGSEVWAVEKSATTAEWTRRN--LDETAKRYPAIAGNYHLDI 187

Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
            D  Q    S ++G  D++++NPPY+    +     E RD+DP ++L GG  DG      
Sbjct: 188 ADATQMPTLSQLDGTIDIVLTNPPYVPLADIPEQP-EARDYDPDLALYGGSADGTLIPER 246

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I    ++ L  DGL  +E    Q   +     +     V    DY G  R L
Sbjct: 247 IIARAAKLLRADGLMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYL 298


>gi|307545988|ref|YP_003898467.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
 gi|307218012|emb|CBV43282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
          Length = 355

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)

Query: 24  VDPDSVLDDR-----QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           VDP  VLD R     +R  +  A  R      +  +LG   F  V  ++      PR   
Sbjct: 107 VDP-GVLDARLLPMERRRIVGLARERIGSRRPLPYLLGEAFFAGVPFSVDERVLIPRSPI 165

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             L++       P +E     R+LDL  G+G + +A     P  +    D+S +ALE+++
Sbjct: 166 AELIEHGFGAWFP-VEP--PARVLDLCAGSGCIGIATALHLPTCEVDLADVSAEALEVSR 222

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   + V +R   + SD F  +EG  +++IVSNPPY+++  +  +  E R  +P ++L 
Sbjct: 223 LNITRHDVGDRVRAVASDLFDGLEGRRYELIVSNPPYVDARDLATMPAEFR-HEPGLALG 281

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            G DGL   R I      HL  DG+  VE+G + +
Sbjct: 282 AGADGLDIVRRILREAREHLTDDGVLIVEVGNSDR 316


>gi|54295143|ref|YP_127558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila str. Lens]
 gi|53754975|emb|CAH16463.1| hypothetical protein lpl2223 [Legionella pneumophila str. Lens]
 gi|307611143|emb|CBX00787.1| hypothetical protein LPW_24911 [Legionella pneumophila 130b]
          Length = 310

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P IE   V  +LDL TG+G + +A     P  +   VDIS +AL +A  N   + V ++ 
Sbjct: 133 PWIEAEQVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVATINCERHDVGDQL 192

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             ++SD F+++ G  +D+IVSNPPY+    +  L  E R  +P ++L+ G +GL+    I
Sbjct: 193 ALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EPVLALETGNNGLAIIEKI 251

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
                 +L++ G+  VE+G +++ 
Sbjct: 252 LKNAHAYLSEHGILVVEVGNSEEA 275


>gi|257069074|ref|YP_003155329.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachybacterium faecium DSM 4810]
 gi|256559892|gb|ACU85739.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachybacterium faecium DSM 4810]
          Length = 301

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 118/271 (43%), Gaps = 27/271 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYN 62
           D+ + +    G  + Q +V    +LD+  + F   L    VR  + E +  ILG   F  
Sbjct: 32  DARALIAHAAG--TEQPLV----MLDELPQGFTQRLEQLTVRRERREPLQLILGRAPFRR 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETEL +D     +        +  ++DL  G+GA+  A+L E P  
Sbjct: 86  LMLDVEPGVFIPRPETELALDLLREHT-----TGPLTEVVDLCAGSGALGAAVLDEIPGA 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYI-- 175
           + + V+I   A  + + N    G   R   L++D  + V  L      D ++SNPPYI  
Sbjct: 141 RVLAVEIDPAAAALTRRNLDRAGPG-RGRVLEADLCAEVPELAAAAPVDAVLSNPPYIPP 199

Query: 176 ESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           E+V  D    EVR+ DP  +L  GG DGL   R + D   R L   G+  +E    Q   
Sbjct: 200 EAVPRDA---EVREHDPHRALFGGGPDGLEVPRAVLDWARRLLRPGGVLVMEHADVQGAA 256

Query: 235 VVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
                     F  ++   D  G DR L+  R
Sbjct: 257 AREAAAVNGGFDQLSTLPDLTGRDRFLVARR 287


>gi|170093107|ref|XP_001877775.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647634|gb|EDR11878.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 300

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 96/212 (45%), Gaps = 25/212 (11%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G + F  + L        PRPETE  V + LA SL     ++ + +LDLGTG+G + L L
Sbjct: 72  GSQPFGPLNLLTRPPVLIPRPETEHWVLN-LAESL-SPAAQNPISLLDLGTGSGCIPLLL 129

Query: 116 LKESP--FFKGVGVDISCKALEIAKSNAVTNGVSER-------------FDTLQSDWFSS 160
               P       GVDIS  A+ +A  NA   G+ +              F    +D F  
Sbjct: 130 CHLWPPGSVHACGVDISPHAMRLATDNAALCGIPQNASAISPQNTFKATFANFLADHFP- 188

Query: 161 VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           V GL     FDVI SNPPYI       L   V D++   +L GG  GL  Y  IA  + R
Sbjct: 189 VGGLRTALPFDVITSNPPYIPWEEYINLPRSVSDYEDPKALFGGPTGLEFYHAIARFLCR 248

Query: 216 H--LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              L+ + L ++E+G  Q   V ++  S  LF
Sbjct: 249 KGVLSPNALVALEVGREQAEKVEQVVLSTGLF 280


>gi|62260141|gb|AAX77884.1| unknown protein [synthetic construct]
          Length = 349

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153
           DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + +S+R   +
Sbjct: 161 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 217

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   + I   
Sbjct: 218 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 276

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             +++ ++G+  VE+G +Q
Sbjct: 277 ADKYMTENGVLIVEVGNSQ 295


>gi|331699239|ref|YP_004335478.1| putative protein-(glutamine-N5) methyltransferase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953928|gb|AEA27625.1| putative protein-(glutamine-N5) methyltransferase, unknown
           substrate-specific [Pseudonocardia dioxanivorans CB1190]
          Length = 258

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R    + + +I+GW  F  +R+ ++   F PR  T  L   A+A +      RD
Sbjct: 36  LAAMVARRAAGDPLEQIVGWAGFRGLRVVVAPGVFVPRQRTSFLAGLAVAAT------RD 89

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D+  G GAV LA+  ES   +    D+   A+  A+ N     V       Q D 
Sbjct: 90  GATVVDMCCGAGAVALAVRVESGAAQVHAADVDPAAVACARRNLPPATVH------QGDL 143

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++++     G  DV+V+N PY+ +  V  +  E R  +P ++LDGG DGL   R +  G 
Sbjct: 144 YAALPPDLRGRVDVVVANAPYVPTAAVALMPPEARLHEPMVALDGGGDGLDIARRVVAGA 203

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            + L   G+  VE   +++  V+R   +R  F  +   D
Sbjct: 204 PQWLVAGGVLLVET-SDEQAPVLRDVFARNGFAASVESD 241


>gi|160899050|ref|YP_001564632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Delftia acidovorans SPH-1]
 gi|160364634|gb|ABX36247.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Delftia acidovorans SPH-1]
          Length = 325

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 7/166 (4%)

Query: 100 RILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LDL TG G++ CLA +   P  +  G DIS  AL +A+ N   + ++ER   L+SD  
Sbjct: 144 RVLDLCTGNGSLACLAAMA-WPEVEVTGADISADALAVARINVDRHELAERVQLLESDGL 202

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +++ G +D+++ NPPY+ +  +  L  E +  +P ++L GG DG+   R +   +   L 
Sbjct: 203 AALPGPWDLVLCNPPYVNADSMLRLPAEYQ-AEPELALAGGADGMDFIRRLLLDLPSRLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           K+G+  +EIG N+K      F    +F ++      G+++VLL  +
Sbjct: 262 KEGVVVLEIG-NEKDFFEAAFPDLPVFWLDT---SSGDEQVLLITQ 303


>gi|319787543|ref|YP_004147018.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudoxanthomonas suwonensis 11-1]
 gi|317466055|gb|ADV27787.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudoxanthomonas suwonensis 11-1]
          Length = 310

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  R+V R LDL TG+G + +A+   +P ++  GVDIS  AL +A  N      ++  
Sbjct: 124 PWLGGREVHRALDLCTGSGCIAIAMGHYNPDWQVDGVDISDDALALAAENK-ERLHADNV 182

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  +++IV+NPPY+     D L  E  D++P + L  G DGL     I
Sbjct: 183 ELVKSDLFAGLAGRRYELIVTNPPYVTDEETDALPREY-DYEPELGLRAGPDGLDLVLKI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL++DGL   E+G +++
Sbjct: 242 LRDAPDHLSEDGLLICEVGESEQ 264


>gi|197285660|ref|YP_002151532.1| methylase [Proteus mirabilis HI4320]
 gi|227356165|ref|ZP_03840554.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus
           mirabilis ATCC 29906]
 gi|194683147|emb|CAR43748.1| putative methylase [Proteus mirabilis HI4320]
 gi|227163629|gb|EEI48545.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus
           mirabilis ATCC 29906]
          Length = 310

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  RILDL TG+G + +A   E    +   VDIS  ALE+A+ N   +G+  R   +QS
Sbjct: 131 QEPTRILDLCTGSGCIAIACAHEFQEAEVDAVDISADALEVAEFNIENHGLIHRVYPMQS 190

Query: 156 DWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F + V   +D+IV+NPPY+++  +  L  E    +P ++L  G+DGL   R I     
Sbjct: 191 DLFEAIVPTPYDIIVTNPPYVDAEDMGDLPDEYH-IEPELALASGVDGLDITRQILLKAP 249

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239
            +L++ G+   E+G N  V ++  F
Sbjct: 250 DYLSEKGILVCEVG-NSMVHLIEQF 273


>gi|167571408|ref|ZP_02364282.1| hemK protein [Burkholderia oklahomensis C6786]
          Length = 182

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 7/165 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSD 156
           +LDLGTG+GA+ +++  E P  +   +D S  AL++A+ NA       R       L+SD
Sbjct: 12  VLDLGTGSGAIAVSIASERPDARVWALDRSAAALDVARRNARKLLAPARPGGPLQFLESD 71

Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           W+++++    F VIVSNPPYI          ++R F+PR +L    DGL+  R I  G  
Sbjct: 72  WYAALDSGRRFHVIVSNPPYIARHDPHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAH 130

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
             L   G   +E GY+Q   V    E+     V +  D    +R 
Sbjct: 131 AFLAPGGALWIEHGYDQAAAVRARLEAAGFADVESLADLASIERA 175


>gi|297582016|ref|ZP_06943935.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297533711|gb|EFH72553.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 314

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD F 
Sbjct: 139 RIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRSDLFR 198

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I    S +L 
Sbjct: 199 DLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANASLYLK 257

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 258 ENGVLVCEVG 267


>gi|104780703|ref|YP_607201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas entomophila L48]
 gi|95109690|emb|CAK14391.1| modification methylase [Pseudomonas entomophila L48]
          Length = 302

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 11/209 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+D +R  L + + R ++       +LG   F  +   +      PR     L++  
Sbjct: 58  DCQLEDDERVRLQHLLKRRIEERVPTAYLLGEAWFCGMSFIVDERVLVPRSPIGELIEKR 117

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143
               L      +  RILDL TG+G  C+ ++    F     V  D+S  ALE+A  N   
Sbjct: 118 FEPWL----ATEPARILDLCTGSG--CIGIVAADVFQDAEVVLADLSFAALEVANQNIER 171

Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +G+ +R  T+Q D F  + G  FD+I+SNPPY+++   D +  E    +P + L  G DG
Sbjct: 172 HGLEQRVYTVQGDGFGGLPGQRFDLILSNPPYVDAEDFDDMPAEYH-HEPELGLACGNDG 230

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           L   R +    + HL + GL  VE+G +Q
Sbjct: 231 LDLVRRMLAEAADHLTEKGLLIVEVGNSQ 259


>gi|116668825|ref|YP_829758.1| HemK family modification methylase [Arthrobacter sp. FB24]
 gi|116608934|gb|ABK01658.1| modification methylase, HemK family [Arthrobacter sp. FB24]
          Length = 313

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 1/207 (0%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + I R +    +  ILGW +F  +R+ +++  F PR  T  LV  A    L       
Sbjct: 87  LESMIERRVAGLPLEHILGWAEFCGLRIGVTAGVFVPRRRTGFLVRQA-ELLLRATHDGG 145

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R++DL  G+GAV  AL       +    D+   A+  AK N    G       L    
Sbjct: 146 VPRVVDLCCGSGAVGAALAARVAGIELHAADLDPTAVLCAKGNIEPAGGHVHQGDLFEAL 205

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            + + G   V+V+N PY+ +  +  +  E R  +P +SLDGG DGL   R +  G    L
Sbjct: 206 PARLRGRITVLVANAPYVPTAAIGTMPPEARAHEPLMSLDGGPDGLDIQRRVIAGAPAWL 265

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
              G   +E    Q    + +     L
Sbjct: 266 APGGHVLIETSRRQARRTIGLMRGAGL 292


>gi|237746595|ref|ZP_04577075.1| modification methylase HemK [Oxalobacter formigenes HOxBLS]
 gi|229377946|gb|EEO28037.1| modification methylase HemK [Oxalobacter formigenes HOxBLS]
          Length = 302

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 10/169 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  IL+L TG+G  CLA++    F       V++S  AL IA++N    G+ +R     +
Sbjct: 131 ITDILELCTGSG--CLAIMLADRFANATVDAVELSPAALGIAQTNINRYGMKDRIQLHHA 188

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D +  + E  + +IV+NPPY+    +D L  E    +P+++L GG DG+   R I     
Sbjct: 189 DLYDGIPEKRYQLIVTNPPYVNQSSMDTLPPEYLH-EPQMALAGGFDGMDIVRRIVYTAG 247

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             L  DGL  VEIG N+  + +  F   +L  ++     GG+DRV L  
Sbjct: 248 ERLTDDGLLIVEIG-NEAENAMAAFPELELTWLST---SGGDDRVFLLT 292


>gi|258654968|ref|YP_003204124.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
 gi|258558193|gb|ACV81135.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
          Length = 276

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 4/195 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++GW +F  +R+ ++   F PR  + LLV +A+     R E      +++L  G G
Sbjct: 59  PLEYLVGWVEFDGLRIAVTDGVFVPRQRSRLLVRAAVGHLAGRPEPL----VVELCCGCG 114

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ LA+    P  +    DI   A+  A+SN    G +     L +     + G  DV+V
Sbjct: 115 AIGLAIAAAVPGVRLHAADIDPVAVGCARSNLAPIGAAVYAGDLFAALPGRLRGAVDVLV 174

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ +  +  +  E RD +P I+LDGG DG    R +  G    L  DG+  VE+G 
Sbjct: 175 ANAPYVPTAAIALMPPEARDHEPGIALDGGPDGTRVLRRVIAGAVAWLAPDGVLLVEVGT 234

Query: 230 NQKVDVVRIFESRKL 244
           +Q   +   F +  L
Sbjct: 235 SQIPLITTAFTAAGL 249


>gi|227114798|ref|ZP_03828454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 310

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS +A
Sbjct: 113 PRSPIGELINNYFDEQLPKTPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSEA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+  R   ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263


>gi|89256954|ref|YP_514316.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica LVS]
 gi|115315316|ref|YP_764039.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica OSU18]
 gi|118496921|ref|YP_897971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. novicida U112]
 gi|134301405|ref|YP_001121373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|156503148|ref|YP_001429213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|167010048|ref|ZP_02274979.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. holarctica FSC200]
 gi|194324148|ref|ZP_03057922.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. novicida FTE]
 gi|208780371|ref|ZP_03247712.1| hypothetical adenine-specific methylase YfcB [Francisella novicida
           FTG]
 gi|254368216|ref|ZP_04984236.1| adenine-specific methylase, hemK family [Francisella tularensis
           subsp. holarctica 257]
 gi|254372283|ref|ZP_04987774.1| modification methylase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373762|ref|ZP_04989245.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548]
 gi|290954115|ref|ZP_06558736.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica URFT1]
 gi|295312485|ref|ZP_06803254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica URFT1]
 gi|89144785|emb|CAJ80123.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. holarctica LVS]
 gi|115130215|gb|ABI83402.1| HemK family, adenine-specific methylase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|118422827|gb|ABK89217.1| modification methylase, HemK family [Francisella novicida U112]
 gi|134049182|gb|ABO46253.1| methyltransferase, HemK family [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254026|gb|EBA53120.1| adenine-specific methylase, hemK family [Francisella tularensis
           subsp. holarctica 257]
 gi|151570012|gb|EDN35666.1| modification methylase [Francisella novicida GA99-3549]
 gi|151571483|gb|EDN37137.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548]
 gi|156253751|gb|ABU62257.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|194321595|gb|EDX19079.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. novicida FTE]
 gi|208743739|gb|EDZ90042.1| hypothetical adenine-specific methylase YfcB [Francisella novicida
           FTG]
 gi|328676394|gb|AEB27264.1| Adenine-specific methylase, HemK family [Francisella cf. novicida
           Fx1]
          Length = 314

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153
           DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + +S+R   +
Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 191

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   + I   
Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             +++ ++G+  VE+G +Q
Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269


>gi|254369814|ref|ZP_04985824.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122773|gb|EDO66902.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 314

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 10/207 (4%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  + 
Sbjct: 69  LLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145
            +  I+  DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + 
Sbjct: 129 WINDID--DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S+R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL 
Sbjct: 184 LSDRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLD 242

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             + I     +++ ++G+  VE+G +Q
Sbjct: 243 LAKRIILEADKYMTENGVLIVEVGNSQ 269


>gi|157374776|ref|YP_001473376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sediminis HAW-EB3]
 gi|157317150|gb|ABV36248.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella
           sediminis HAW-EB3]
          Length = 314

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R+LDL TG+  + +A   E    +   +DIS  ALE+A+ N  + GV +R 
Sbjct: 127 PWLYNKSVNRVLDLCTGSACIAIACAYEFDEAEVDALDISTDALEVAQINVESLGVMDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             ++SD FS++     +D+IVSNPPY+++  +  +  E    +P + L  G DGL   + 
Sbjct: 187 FPMESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEFH-HEPEVGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    S +L ++GL  VE+G N  V ++  F       V+   ++GG D V +  R
Sbjct: 246 ILANASDYLTEEGLLVVEVG-NSMVHLIEQFPDVPFTWVSF--EHGG-DGVFVLTR 297


>gi|254520952|ref|ZP_05133007.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas sp. SKA14]
 gi|219718543|gb|EED37068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas sp. SKA14]
          Length = 309

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV R LDL TG+G + +A+    P ++  GVD+S  AL +A+ N      +   
Sbjct: 123 PWLAGRDVYRALDLCTGSGCIAIAMGHYYPNWQVDGVDLSDDALSLAEENR-ERLQAYNV 181

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P + L  G DGL     I
Sbjct: 182 NLLKSDLFNGLSGRHYDLIVTNPPYVTNDETDALPKEY-SYEPDMGLRAGDDGLDLVLKI 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL++DGL   E+G +++
Sbjct: 241 LRDAPLHLSEDGLLICEVGESEQ 263


>gi|56708636|ref|YP_170532.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110671108|ref|YP_667665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis FSC198]
 gi|224457830|ref|ZP_03666303.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|254371269|ref|ZP_04987271.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875502|ref|ZP_05248212.1| hemK, adenine-specific methylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605128|emb|CAG46250.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321441|emb|CAL09633.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569509|gb|EDN35163.1| hypothetical protein FTBG_01043 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841501|gb|EET19937.1| hemK, adenine-specific methylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159874|gb|ADA79265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis NE061598]
          Length = 314

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153
           DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + +S+R   +
Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQLSDRVRAI 191

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   + I   
Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             +++ ++G+  VE+G +Q
Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269


>gi|187931125|ref|YP_001891109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712034|gb|ACD30331.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 314

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153
           DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + +S+R   +
Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALTVANHNIKKHQLSDRVRAI 191

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   + I   
Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEYH-YEPKLALEAGDDGLDLAKRIILE 250

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             +++ ++G+  VE+G +Q
Sbjct: 251 ADKYMTENGVLIVEVGNSQ 269


>gi|157962410|ref|YP_001502444.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella pealeana ATCC 700345]
 gi|157847410|gb|ABV87909.1| modification methylase, HemK family [Shewanella pealeana ATCC
           700345]
          Length = 314

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 12/209 (5%)

Query: 59  DFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +F  +   +      PR P  EL+ +    FS P +  + V R+LDL TG+  + +A   
Sbjct: 98  NFAGLEFYVDERVLVPRSPIAELIANR---FS-PWLYNKPVNRVLDLCTGSACIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T  V +R   ++SD FS++     +D+IVSNPPY+
Sbjct: 154 EFEDAEVDALDISVDALDVAQINIETLEVMDRVFPMESDLFSAIPKGAHYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    + +L +DGL  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEYH-HEPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              F       VN F++  G D V +  R
Sbjct: 272 SEQFPDVPFTWVN-FEN--GGDGVFILTR 297


>gi|240102561|ref|YP_002958870.1| Methylase, putative, hemK and PrmA related [Thermococcus
           gammatolerans EJ3]
 gi|239910115|gb|ACS33006.1| Methylase, putative, hemK and PrmA related [Thermococcus
           gammatolerans EJ3]
          Length = 195

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 28/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +Y ++L L SD +EP  +T LL ++        +E R     LD+GTGTG + L + +++
Sbjct: 6   YYGIKLELHSDVYEPAEDTFLLAET--------LEVRPGEIALDVGTGTGLIALLMARKA 57

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
            +   +GVD++ KA+E+A+ NA  NG+S   +   SD F +V G FDVI  N PY+    
Sbjct: 58  KYV--LGVDVNPKAVELARRNARLNGIS-NVEFRLSDLFENVSGRFDVITFNAPYLPG-- 112

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD----GVSRHLNKDG 221
                      +P  ++D  + G    R + D     V  HLN++G
Sbjct: 113 -----------EPEKAIDLALVGGKTGREVIDRFIAEVPDHLNENG 147


>gi|289767518|ref|ZP_06526896.1| methylase [Streptomyces lividans TK24]
 gi|289697717|gb|EFD65146.1| methylase [Streptomyces lividans TK24]
          Length = 280

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F  +R+ ++   F PR  TE LV  ALA +       +
Sbjct: 60  LTALVGRRVGGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVSEALAHA----PHAN 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153
           VV  L  G+G     LA   + P      VD +  A+  A+ N    G      + FD L
Sbjct: 116 VVVDLCCGSGAVGAALAAALDRPEVHAADVDPA--AVRCARGNLADAGGRVYAGDLFDAL 173

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 ++ G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A   
Sbjct: 174 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGTDGLDVLRRVAAAA 229

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L   G   VE    Q  D V  F    L
Sbjct: 230 PDWLAPGGCLLVETSERQAPDAVGAFTRAGL 260


>gi|126439529|ref|YP_001059484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 668]
 gi|126219022|gb|ABN82528.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 668]
          Length = 307

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N   +G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPARRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L          G+D V
Sbjct: 239 ADGMDIVRRIVGEARRWLQDDGVLVVEIG-NERANVEAAFGGLELVW---LPTSAGDDSV 294

Query: 260 LLF 262
            L 
Sbjct: 295 FLI 297


>gi|319900206|ref|YP_004159934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides helcogenes P 36-108]
 gi|319415237|gb|ADV42348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides helcogenes P 36-108]
          Length = 312

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 110/259 (42%), Gaps = 12/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S    C + G S+    +  D +L  +++  L   + R    E I  + G   F      
Sbjct: 59  SRIICCEMLGQSTVDYYLGKDMILSLKEKQELDGILSRLRDFEPIQYVQGTTSFLGRTFR 118

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P  + V 
Sbjct: 119 VAPGVLIPRPETEELVEIMLK------EIPADARILDIGTGSGCIAVSLSKGLPCAQVVA 172

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            DIS +AL  A  N      S +F   D L        E  +DVIVSNPPY+       +
Sbjct: 173 WDISEEALATAHRNNDALQASVQFALCDVLTC--CPDQEDRYDVIVSNPPYVLEKEKLQM 230

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              V D++P ++L     D L  YR IA+   + L   G    EI        V +   +
Sbjct: 231 ERNVLDWEPSLALFVPDTDPLLFYRRIAELGQKLLVAGGKLYFEINRAFGEATVAMLGGQ 290

Query: 243 KLFLVNAFKDYGGNDRVLL 261
                +  KD  GNDR ++
Sbjct: 291 GYANAHILKDISGNDRFVI 309


>gi|121594426|ref|YP_986322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acidovorax sp. JS42]
 gi|120606506|gb|ABM42246.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Acidovorax sp. JS42]
          Length = 309

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 9/168 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG G++ +      P  +  G D+S  AL +A+ N   +G+ ER   ++SD  ++
Sbjct: 137 VLDLCTGNGSLAVLAAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAA 196

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216
           + G +D+I+ NPPY+ +  +  L  E R  +P ++L     GG DG+   R +       
Sbjct: 197 LRGPWDLILCNPPYVNAASMAQLPPEYR-AEPELALSGNMRGGSDGMDFIRQLLADAPAR 255

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +++D +  +EIG N++      F    +F     +   G+D+VLL  R
Sbjct: 256 MSEDAVLVLEIG-NEREHFEAAFPDLPVFW---LETSAGSDQVLLLTR 299


>gi|210634584|ref|ZP_03298180.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279]
 gi|210158769|gb|EEA89740.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279]
          Length = 397

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 7/171 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFD 151
           V R+L++G GTG + L++  E     + V +DI  +A+++   N    G+S      R  
Sbjct: 224 VARVLEVGCGTGCISLSIAAERRDRVRCVAIDIEPRAVDLTIRNRDALGISPQAVDVRLG 283

Query: 152 TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S      E G FDV+VSNPPYI + ++  L  EV DF+P ++L+GG DGL  +R + 
Sbjct: 284 NLVSPLDRETEWGTFDVLVSNPPYIPTSVLTLLPHEVADFEPDLALNGGEDGLDIFRRLV 343

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +     L   GL + E+          +  + ++  V    D     R++L
Sbjct: 344 NAAPHMLRPGGLLACELYEGHLDQAAALCRAAQMTDVRIVNDLTNRPRMIL 394



 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 39/79 (49%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  VTGLS  ++ +  D  +   +   +  A+VR  K E +  I+G  DF  + +    
Sbjct: 34  LLSGVTGLSRTEIYMSFDKPMSAEELAAMHGAVVRRAKGEPLQYIIGETDFRTITVACEP 93

Query: 70  DTFEPRPETELLVDSALAF 88
               PRPETELLV+  L +
Sbjct: 94  GVLIPRPETELLVEEVLRY 112


>gi|183599681|ref|ZP_02961174.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
 gi|188021935|gb|EDU59975.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
          Length = 310

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A   E P  +   VDIS   L + + N   +G+  R   ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYEFPEAEVDAVDISTDVLAVTEHNIANHGLEHRVIPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R I     R L+ 
Sbjct: 196 MPDVKYDLIVTNPPYVDAEDMDDLPEEFR-VEPELALAAGSDGLKLVRRILANAPRFLSD 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +G+   E+G N  V ++  +       +    +YGG D V +  R
Sbjct: 255 EGVLICEVG-NSMVHLIEQYPEIPFIWLEF--EYGG-DGVFMLTR 295


>gi|21225345|ref|NP_631124.1| methylase [Streptomyces coelicolor A3(2)]
 gi|9716169|emb|CAC01560.1| putative methylase [Streptomyces coelicolor A3(2)]
          Length = 280

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 14/211 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F  +R+ ++   F PR  TE LV  ALA +       +
Sbjct: 60  LTALVGRRVGGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVSEALAHA----PHAN 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153
           VV  L  G+G     LA   + P      VD +  A+  A+ N    G      + FD L
Sbjct: 116 VVVDLCCGSGAVGAALAAALDRPEVHAADVDPA--AVRCARGNLADAGGRVYAGDLFDAL 173

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 ++ G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A   
Sbjct: 174 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGTDGLDVLRRVAAAA 229

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L   G   VE    Q  D V  F    L
Sbjct: 230 PGWLAPGGCLLVETSERQAPDAVGAFTRAGL 260


>gi|54298194|ref|YP_124563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila str. Paris]
 gi|53751979|emb|CAH13405.1| hypothetical protein lpp2252 [Legionella pneumophila str. Paris]
          Length = 310

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 5/161 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++  +   P IE   V  +LDL TG+G + +A     P  +   VDIS +A
Sbjct: 119 PRSPIGELINNQFS---PWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQA 175

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A  N   + V ++   ++SD F+++ G  +D+IVSNPPY+    +  L  E R  +P
Sbjct: 176 LAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EP 234

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            ++L+ G +GL+    I      +L++ G+  VE+G +++ 
Sbjct: 235 VLALETGNNGLAIIEKILKNAHAYLSEHGILVVEVGNSEEA 275


>gi|254247871|ref|ZP_04941192.1| Modification methylase HemK [Burkholderia cenocepacia PC184]
 gi|124872647|gb|EAY64363.1| Modification methylase HemK [Burkholderia cenocepacia PC184]
          Length = 302

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293


>gi|134296042|ref|YP_001119777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia vietnamiensis G4]
 gi|134139199|gb|ABO54942.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 302

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S  ALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNADIDAVDLSDDALEVARINVRDYGLEDRIT 180

Query: 152 TLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +       +G +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDGRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++ +V   F   +L          G+D V L 
Sbjct: 240 IVRRIVGEAHRWLHDDGVLVVEIG-NERENVEAAFGGLEL---TWLPTSAGDDAVFLI 293


>gi|121997613|ref|YP_001002400.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halorhodospira halophila SL1]
 gi|121589018|gb|ABM61598.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Halorhodospira halophila SL1]
          Length = 306

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 8/142 (5%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P ++   V R+L++GTG+G + +A     P       DI   ALE+A  N   + + ER 
Sbjct: 125 PWVDPDAVERVLEIGTGSGCIAVACAYAFPGAAVDATDIDDDALEVAAVNVHRHDLEERI 184

Query: 151 DTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +++D +   EGL    + +IV+NPPY+++  +  L  E R  +PR +L  G DGL   
Sbjct: 185 ALIRADVY---EGLPQRRYQIIVTNPPYVDAAAMAALPPEYR-HEPRHALAAGEDGLDVV 240

Query: 207 RTIADGVSRHLNKDGLCSVEIG 228
           R I  G    L  DGL  VE+G
Sbjct: 241 RRILRGAPERLTDDGLLVVEVG 262


>gi|52842514|ref|YP_096313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|148359841|ref|YP_001251048.1| adenine specific methylase [Legionella pneumophila str. Corby]
 gi|296107891|ref|YP_003619592.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy]
 gi|52629625|gb|AAU28366.1| adenine specific methylase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148281614|gb|ABQ55702.1| adenine specific methylase [Legionella pneumophila str. Corby]
 gi|295649793|gb|ADG25640.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy]
          Length = 310

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P IE   V  +LDL TG+G + +A     P  +   VDIS +AL +A  N   + V ++ 
Sbjct: 133 PWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVATINCERHDVGDQL 192

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             ++SD F+++ G  +D+IVSNPPY+    +  L  E R  +P ++L+ G +GL+    I
Sbjct: 193 ALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYRH-EPVLALETGNNGLAIIEKI 251

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
                 +L++ G+  VE+G +++ 
Sbjct: 252 LKNAHAYLSEHGILVVEVGNSEEA 275


>gi|281338315|gb|EFB13899.1| hypothetical protein PANDA_009308 [Ailuropoda melanoleuca]
          Length = 338

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86
           L  RQ   +     R L+   +  ILG  DF  + L +    F PRPETE LV+  L   
Sbjct: 89  LTPRQLQCVQELSSRRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEV 148

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A S   +  +    IL++G G+GA+ L+LL + P  + + VD    A+ + + NA    +
Sbjct: 149 AQSPCAMGAQGGPLILEVGCGSGAIALSLLSQLPQSRVIAVDKGEAAICLTQENAQRLQL 208

Query: 147 SERFD------TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +R        TL+  W   +  G  D++VSNPPYI    ++ L  E+R ++  ++LDGG
Sbjct: 209 LDRIQIVPLDVTLEGSWAHLLTWGPMDLVVSNPPYIFHRDMEQLAPEIRSYEDPLALDGG 268

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGN 256
            +G+     I       L   G   +E+       V    +SR    L LV   +D+ G 
Sbjct: 269 EEGMDIITYILALAPWLLKDSGSIFLEVDPRHPELVGSWLQSRPDLSLDLVAVRRDFCGR 328

Query: 257 DRVL 260
            R L
Sbjct: 329 SRFL 332


>gi|258652313|ref|YP_003201469.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
 gi|258555538|gb|ACV78480.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
          Length = 298

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 20/243 (8%)

Query: 34  QRFFLTN--AIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++ FLT+  A+V R  +   +  + G        + +    F PRPETE L+  AL  ++
Sbjct: 51  EQSFLTDYQALVERRAQRIPLQHLTGSVQLGRATVAVGPGVFVPRPETESLLVWAL-HAI 109

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +E+  VV   DL TG+G + LA+  E P  + +GV+ S  AL  A+ N VTN  + R 
Sbjct: 110 AAVERPVVV---DLCTGSGVLALAIAAERPDARVIGVERSSAALAWARRN-VTNAGAGRT 165

Query: 151 -------DTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202
                  D         +EGL D++ +NPPY+ E   V+    EV D DP  ++  G DG
Sbjct: 166 KVELRGGDIFDERLLVDLEGLADLVTANPPYVPEGTAVEP---EVADHDPPEAVFAGPDG 222

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLL 261
           L+  R +    +  L   G+ ++E   +    V  +  SR++   V    D  G  R + 
Sbjct: 223 LAVIRPLLSVAASLLKLGGVLAIEHDDSHGETVPALLRSRRVLTDVEDHSDLAGRPRFVT 282

Query: 262 FCR 264
             R
Sbjct: 283 ATR 285


>gi|225551975|ref|ZP_03772915.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1]
 gi|225370973|gb|EEH00403.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1]
          Length = 286

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 94/187 (50%), Gaps = 20/187 (10%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   IH IL  ++F  +  +L+     PR +TE L + AL     +I++    +ILDL  
Sbjct: 60  KGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCC 115

Query: 107 GTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           G+G + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G
Sbjct: 116 GSGCIGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKG 171

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNK 219
             D+I++NPPY+         LE+++    +P  +L G G DGL+  R I       LN 
Sbjct: 172 KLDIIITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILSQAKEKLNP 226

Query: 220 DGLCSVE 226
           +GL  +E
Sbjct: 227 NGLIIIE 233


>gi|256380185|ref|YP_003103845.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
 gi|255924488|gb|ACU39999.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
          Length = 261

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    + +  +LGW +F  +R+ ++   F PR  TE LV  A A +           +
Sbjct: 47  VTRRAAGDPLEHLLGWAEFCGLRIAVAPGVFVPRRRTERLVALAAALAP------PAPVV 100

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWF 158
           LDL  G+GA+  AL    P  +    D+   A E A+ N        R   +D L  D  
Sbjct: 101 LDLCCGSGALGAALAHRLPGARVTAADLDPAAAECARRNLPAPHRVHRGDLYDPLPDD-- 158

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             + G  DV+++N PY+ +  +  +  E RD +PR +LDGG DGL   R +A G    L 
Sbjct: 159 --LRGRVDVLLANAPYVPTGAIGLMPPEARDHEPRTALDGGSDGLDVLRRVAAGAPDWLA 216

Query: 219 KDGLCSVEIG 228
           + G    EIG
Sbjct: 217 ERGALLFEIG 226


>gi|301770295|ref|XP_002920605.1| PREDICTED: hemK methyltransferase family member 1-like [Ailuropoda
           melanoleuca]
          Length = 358

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 112/244 (45%), Gaps = 13/244 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--- 86
           L  RQ   +     R L+   +  ILG  DF  + L +    F PRPETE LV+  L   
Sbjct: 89  LTPRQLQCVQELSSRRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEV 148

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A S   +  +    IL++G G+GA+ L+LL + P  + + VD    A+ + + NA    +
Sbjct: 149 AQSPCAMGAQGGPLILEVGCGSGAIALSLLSQLPQSRVIAVDKGEAAICLTQENAQRLQL 208

Query: 147 SERFD------TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +R        TL+  W   +  G  D++VSNPPYI    ++ L  E+R ++  ++LDGG
Sbjct: 209 LDRIQIVPLDVTLEGSWAHLLTWGPMDLVVSNPPYIFHRDMEQLAPEIRSYEDPLALDGG 268

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGN 256
            +G+     I       L   G   +E+       V    +SR    L LV   +D+ G 
Sbjct: 269 EEGMDIITYILALAPWLLKDSGSIFLEVDPRHPELVGSWLQSRPDLSLDLVAVRRDFCGR 328

Query: 257 DRVL 260
            R L
Sbjct: 329 SRFL 332


>gi|149728859|ref|XP_001493498.1| PREDICTED: similar to HemK methyltransferase family member 1
           (M.HsaHemKP) [Equus caballus]
          Length = 357

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 13/232 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102
           L+   +  ILG  DF  + L ++   F PRPETE LV+  L     R   +  +    IL
Sbjct: 104 LQRMPVQYILGEWDFQGLSLKMAPPVFIPRPETEELVEWVLEEVTQRSHVVGAQGGPLIL 163

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSD 156
           ++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R        TL+  
Sbjct: 164 EVGCGSGAISLSLLSQLPQSRVIAVDKGEAAICLTHENAQRLQLQDRIRIMLLDVTLEGS 223

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W   V  G  D++VSNPPY+    ++ L  E+R ++   +LDGG +G+     I    S 
Sbjct: 224 WAHFVPWGPMDLVVSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDVITHILALASW 283

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
            L   G   +E+       +    +SR    L LV   +D+ G  R L   R
Sbjct: 284 LLKDSGSIFLEVDPRHPELIGSWLQSRPDLSLDLVAVRRDFCGRPRFLHIQR 335


>gi|73985650|ref|XP_533816.2| PREDICTED: similar to HemK methyltransferase family member 1
           (M.HsaHemKP) [Canis familiaris]
          Length = 358

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 116/235 (49%), Gaps = 15/235 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVR 100
           R L+   +  ILG  DF  + L ++   F PRPETE LV+  L   A S   +  +D   
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLKMAPPVFIPRPETEELVEWVLEEVAQSPCAMGTQDGPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQ 154
           IL++G G+GA+ L+LL + P  + + VD    A+ + + NA    + +R        TL+
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGEAAICLTEENAQRLRLLDRIRIVPLDVTLE 222

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             W   +  G  D++VSNPPYI    ++ L  E+R ++  ++LDGG +G+     I   +
Sbjct: 223 GSWAHLLPWGPVDLVVSNPPYIFHQDMEQLAPEIRSYEDPLALDGGEEGMDIIIHIL-AL 281

Query: 214 SRHLNKD-GLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           +R L KD G   +E+       V    +S+    L LV   +D+ G  R L   R
Sbjct: 282 ARWLLKDSGSIFLEVDPRHPELVGNWLQSQPDLSLDLVAMRRDFCGRPRFLHIQR 336


>gi|294141668|ref|YP_003557646.1| hemK family protein [Shewanella violacea DSS12]
 gi|293328137|dbj|BAJ02868.1| hemK family protein [Shewanella violacea DSS12]
          Length = 314

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R+LDL TG+  + +A   E    +   +DIS  AL++A+ N    GV +R 
Sbjct: 127 PWLYNKQVNRVLDLCTGSACIAIACAYEFDEAEVDALDISADALDVAQINIENLGVMDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             ++SD FS++     +D+IVSNPPY+++  +  +  E +  +P I L  G DGL   + 
Sbjct: 187 FPIESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYQ-HEPEIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + ++  DGL  VE+G N  V ++  F       V AF++  G D V +  R
Sbjct: 246 ILANAADYMTTDGLLVVEVG-NSMVHLMEQFPDVPFTWV-AFEN--GGDGVFVLTR 297


>gi|52425320|ref|YP_088457.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mannheimia succiniciproducens MBEL55E]
 gi|52307372|gb|AAU37872.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
          Length = 344

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 75/130 (57%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  ++    +   VD+S  AL +A+ N     +SER   +QSD F 
Sbjct: 172 RILDMCTGSGCIAIACAEQFKEAEVDAVDLSIDALNVAEINIDRYNLSERVFPIQSDLFD 231

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +V    +D+IVSNPPY++   +  +  E   ++P ++L  G+DGL+  + I    + +LN
Sbjct: 232 NVPADKYDLIVSNPPYVDREDLADMPEEFH-YEPEMALGSGVDGLTITKQILANAANYLN 290

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 291 DDGVLVCEVG 300


>gi|117619640|ref|YP_856879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561047|gb|ABK37995.1| adenine-specific methylase YfcB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 311

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 15/176 (8%)

Query: 56  GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           GW  + + R+ +      PR P  E++ +    F      K +  RI+DL TG+G + + 
Sbjct: 101 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 149

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNP 172
           +  E P  +   +DIS  AL +A+ N   +G+ ++   ++SD F    V   +D+IVSNP
Sbjct: 150 MAHEFPEAEVDAIDISVDALNVAERNINDHGLEQQVIPIRSDLFRDLPVGDKYDLIVSNP 209

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY++S  +  L  E R  +P ++L  G DGL   + +    +  L +DG+  VE+G
Sbjct: 210 PYVDSEDMSDLPDEFR-HEPELALASGSDGLKLTKRLLANAADFLKEDGVLVVEVG 264


>gi|222111086|ref|YP_002553350.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase
           [Acidovorax ebreus TPSY]
 gi|221730530|gb|ACM33350.1| methyltransferase small [Acidovorax ebreus TPSY]
          Length = 309

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 9/168 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG G++ +      P  +  G D+S  AL +A+ N   +G+ ER   ++SD  ++
Sbjct: 137 VLDLCTGNGSLAVLAAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAA 196

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216
           + G +D+I+ NPPY+ +  +  L  E R  +P ++L     GG DG+   R +       
Sbjct: 197 LPGPWDLILCNPPYVNAASMAQLPPEYR-AEPELALSGNMRGGRDGMDFIRQLLADAPAR 255

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +++D +  +EIG N++      F    +F     +   G+D+VLL  R
Sbjct: 256 MSEDAVLVLEIG-NEREHFETAFPDLPVFW---LETSAGSDQVLLLTR 299


>gi|320540077|ref|ZP_08039732.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson]
 gi|320029743|gb|EFW11767.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson]
          Length = 310

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++      LP + +R    ILD+ TG+G + +A     P  +   VDIS + 
Sbjct: 113 PRSPIGELINDRFNALLPHLPQR----ILDMCTGSGCIAIACGNAFPEAEVDAVDISNEV 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +GV  +   ++SD F  V  + +D+IV+NPPY+++  +  L  E R F+P
Sbjct: 169 LVVTERNIQAHGVEHQVIPIRSDLFRDVPAIQYDLIVTNPPYVDAQDMSDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++ L  G DGL   R I      +L+ DG+   E+G N  V ++  +     F   AFK+
Sbjct: 228 KLGLAAGDDGLKLVRRILACAPDYLSDDGVLICEVG-NSMVHLMEQYPDIP-FTWLAFKN 285

Query: 253 YGGNDRVLLFCR 264
             G D V +  +
Sbjct: 286 --GGDGVFMLTK 295


>gi|317504377|ref|ZP_07962361.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM
           15606]
 gi|315664499|gb|EFV04182.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM
           15606]
          Length = 291

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLP--RIEKRDVVRILDLGTG 107
           +  + G   F+     ++     PRPETE+L ++ L A++ P   ++    +R+LD+GTG
Sbjct: 70  VQYVTGTARFFGRDYVVNPHVLIPRPETEVLCETILSAYNQPYCALQPPAPLRVLDIGTG 129

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVS-ERFDTLQSDWFSSVEGL 164
           +G + + L  +         D+S +AL  A+ NA  +   V+ E  D L  D  +     
Sbjct: 130 SGCIAVTLALDLWNSSVSAWDVSGEALLTARENAHRLQAQVNFEWHDVLSLDEAALAATP 189

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219
           FD+IVSNPPY+     DC    +  +V   +P  +L     D L  YR IAD    HLN 
Sbjct: 190 FDIIVSNPPYV----CDCERKDMTEQVLAHEPHTALFVPDNDPLLFYRAIADYGVTHLNP 245

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GL + EI      +  ++ E      + + +D  G +R+++
Sbjct: 246 HGLLAFEINPIYAEETCKMLEHMGYEQIESKEDQYGKERIVI 287


>gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116690054|ref|YP_835677.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|170733388|ref|YP_001765335.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia MC0-3]
 gi|105897951|gb|ABF80909.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116648143|gb|ABK08784.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|169816630|gb|ACA91213.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia cenocepacia MC0-3]
          Length = 302

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRIG 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293


>gi|172060980|ref|YP_001808632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ambifaria MC40-6]
 gi|171993497|gb|ACB64416.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MC40-6]
          Length = 302

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYGLDDRIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     + L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293


>gi|297538015|ref|YP_003673784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylotenera sp. 301]
 gi|297257362|gb|ADI29207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylotenera sp. 301]
          Length = 301

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 10/165 (6%)

Query: 103 DLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           D+ TG+G  CL +L  S F       +DIS  A+++A  N     + E+   ++SD F++
Sbjct: 140 DICTGSG--CLGILLASVFPNAEIDVIDISQDAIDVANINIANYSLQEQVTAIKSDMFTA 197

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++G  +D+I+SNPPY+++  +  L  E ++ +P+++L  G  GL H  TI    + +LN 
Sbjct: 198 LKGKKYDLIISNPPYVDAPSMAALPQEYQN-EPQLALGSGDAGLDHTHTILREAANYLND 256

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G+  VEIG+N++     +  +    + N  +   GN+ V L  +
Sbjct: 257 GGILIVEIGHNREA----LEAAYPNIIFNWLEVSSGNEFVFLLTK 297


>gi|224532844|ref|ZP_03673459.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23]
 gi|224512233|gb|EEF82619.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23]
          Length = 286

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 95/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|194366630|ref|YP_002029240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Stenotrophomonas maltophilia R551-3]
 gi|194349434|gb|ACF52557.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas maltophilia R551-3]
          Length = 309

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 13/148 (8%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV R LDL TG+G + +A+    P ++  GVD+S  AL +A  N       ER 
Sbjct: 123 PWLAGRDVSRALDLCTGSGCIAIAMGHYYPNWEVDGVDLSDDALSLATEN------KERL 176

Query: 151 DT-----LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                  L+SD F+ + G  +D+IV+NPPY+ +   D L  E   ++P + L  G DGL 
Sbjct: 177 QAHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDETDALPQEY-SYEPDMGLRAGDDGLD 235

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               I      HL++DGL   E+G +++
Sbjct: 236 LVLKILRDAPLHLSEDGLLICEVGESEQ 263


>gi|293608153|ref|ZP_06690456.1| modification methylase [Acinetobacter sp. SH024]
 gi|292828726|gb|EFF87088.1| modification methylase [Acinetobacter sp. SH024]
 gi|325122117|gb|ADY81640.1| putative adenine-specific methylase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 335

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFA 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|209886321|ref|YP_002290178.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209874517|gb|ACI94313.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 324

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F+      VDIS  AL +A  N    G+ +R    + 
Sbjct: 158 VSRVLDLCTGSG--CLAILAAQTFYNASVEAVDISKDALAVAAKNVADYGLEDRIALHRG 215

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + F+ + +  +D+I+SNPPY+++  +  L  E R  +P+++ DGG DG+   R I     
Sbjct: 216 NLFAPLGDARYDLIISNPPYVDAEGMSSLPPECR-HEPKLAFDGGRDGIDIVRRIVSEAG 274

Query: 215 RHLNKDGLCSVEIG 228
            HL   G    E+G
Sbjct: 275 AHLTPQGGLLCEVG 288


>gi|94676616|ref|YP_588804.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219766|gb|ABF13925.1| protein-(glutamine-N5) methyltransferase [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 311

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 8/203 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F N+   +      PR     L+       LP+      + ILD+ TG+G + +A+    
Sbjct: 99  FCNLEFYVDKRVLIPRSPIGELIQDNFRNLLPQTP----LHILDMCTGSGCIAIAIAYLY 154

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VDIS  ALE+   N   + +  R   + SD FS +  L +D+IV+NPPY++  
Sbjct: 155 PEAKIDAVDISIDALEVTWHNIKQHELENRVYPICSDLFSELSPLCYDLIVANPPYVDEK 214

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L LE    +P ++L  G DGL   R I     R+L+  G+   E+G      ++  
Sbjct: 215 SMKHLPLEFYA-EPVLALIAGKDGLEFIRRILACAPRYLSSHGILICEVGSTTMTTLIEQ 273

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
           + +   F    F   GG    +L
Sbjct: 274 YPTVPFFWFELFN--GGEGIFML 294


>gi|85716035|ref|ZP_01047012.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
 gi|85697233|gb|EAQ35114.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
          Length = 340

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + R+LDL TG+G  CLA+L    F        D+S  AL +A  N   +G+  R    Q 
Sbjct: 170 ITRVLDLCTGSG--CLAILAARAFPNATVDATDLSAGALAVAARNVHEHGLDGRIQLAQG 227

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F++V+   +D+I+SNPPY+++  +  L  E    +PR++ DGG +G+   R I DG  
Sbjct: 228 DLFAAVKNKRYDLIISNPPYVDAKGMAGLPRECL-AEPRMAFDGGAEGIDLVRRIIDGAE 286

Query: 215 RHLNKDGLCSVEIG 228
            +L   G    E+G
Sbjct: 287 SYLAPAGGLLCEVG 300


>gi|261820752|ref|YP_003258858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261604765|gb|ACX87251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pectobacterium wasabiae WPP163]
          Length = 310

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS  A
Sbjct: 113 PRSPIGELINNYFDEQLPKAPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+  R   ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263


>gi|332140707|ref|YP_004426445.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550729|gb|AEA97447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 324

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 3/142 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             ILD+ TG   + +AL    P  +   VDIS  ALE+A  N   +G+S R   +QSD F
Sbjct: 152 ANILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHGLSHRVYPIQSDLF 211

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           SS+ G  +D+IV+NPPY+++  +  L  E    +P ++L  G DGL     +      +L
Sbjct: 212 SSLAGQKYDLIVTNPPYVDAEDMADLPEEYH-HEPELALAAGDDGLDLVDIMLKEAPTYL 270

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
           N  G   VE+G N +V +   F
Sbjct: 271 NDGGWLFVEVG-NSEVHMSERF 291


>gi|261209854|ref|ZP_05924155.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
 gi|260841040|gb|EEX67565.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
          Length = 310

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 250 LYLKENGVLVCEVG 263


>gi|256827313|ref|YP_003151272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cryptobacterium curtum DSM 15641]
 gi|256583456|gb|ACU94590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cryptobacterium curtum DSM 15641]
          Length = 377

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 16/173 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R +D  TGTG +  +L +E P    +  DIS +A  +A  NA    VS+R D +  +  
Sbjct: 200 LRFVDACTGTGCIAASLAREVPSSSIIATDISAEACALAAENAADLSVSDRVDVVSCNVL 259

Query: 159 SSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             V    +G  D+++SNPPYI + ++  +  EV  F+PR++LDGG DGL  +R + D   
Sbjct: 260 DGVDPNWQGTVDLVISNPPYIPTDVLQSIDQEVTAFEPRLALDGGEDGLDVFRRLLDQAP 319

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF------KDYGGNDRVLL 261
             L   G+ +VE+  +       + ++R L     F      +D  G  RVL+
Sbjct: 320 ALLVPGGVLAVELHEDC------LSQARSLAAAAGFDDIRIAQDLAGRPRVLI 366



 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 38/89 (42%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +    G S   +  D D  L   +R  L     R    E +  I G  DF  + + 
Sbjct: 39  AQWLVSEALGCSRIALYADIDRPLSAEERTILREYTRRRAAGEPLQYITGSVDFRFITIK 98

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEK 95
           +      PRPETE+L+  AL+   PRI++
Sbjct: 99  VRPGVLIPRPETEVLMSEALSELKPRIDE 127


>gi|218132000|ref|ZP_03460804.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697]
 gi|217985876|gb|EEC52216.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697]
          Length = 282

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 107/264 (40%), Gaps = 12/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R L  E I  I G   F 
Sbjct: 24  EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 84  ERSYHVAPGVLIPRPETEELVEVMLR------EISSDARILDIGTGSGCIAISLSKAFPN 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            K    D+S  AL IA+ N      S  F   D L   W       +DVIVSNPPYI   
Sbjct: 138 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WGGDGGQCYDVIVSNPPYITES 195

Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR I +     L   G    EI          
Sbjct: 196 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 255

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           +   +    +   KD  GNDR ++
Sbjct: 256 MLCGQGYTGIRILKDISGNDRFVI 279


>gi|206560466|ref|YP_002231230.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia J2315]
 gi|198036507|emb|CAR52404.1| putative DNA methylase [Burkholderia cenocepacia J2315]
          Length = 302

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A  N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAAINVRDYGLEDRIG 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRTDPDSRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDAVFLI 293


>gi|255683365|ref|NP_598745.2| hemK methyltransferase family member 1 [Mus musculus]
 gi|168984587|emb|CAQ12135.1| HemK methyltransferase family member 1 [Mus musculus]
          Length = 340

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 110/235 (46%), Gaps = 23/235 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +  +D   
Sbjct: 104 RRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVAQRPHAVRAQDGPL 163

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           IL++G G+GA+ L+LL + P  + V VD    A+ +   NA    + +R   +  D  S 
Sbjct: 164 ILEVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENAQRLQLQDRIRIIHLDITS- 222

Query: 161 VEGL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRT 208
            EG           D++VSNPPYI    ++ L  E+  ++  ++LDGG +G+   +H  T
Sbjct: 223 -EGCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILT 281

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           +A  +   LN  G   +E+       V    +S     L LV   +D+ G  R L
Sbjct: 282 LAPQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 333


>gi|325518136|gb|EGC97920.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia sp. TJI49]
          Length = 302

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A  N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAAINVQDYGLGDRIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDTRYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++  V   F   +L          G D V L 
Sbjct: 240 IVRRIVADAHRWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGEDSVFLI 293


>gi|293391987|ref|ZP_06636321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952521|gb|EFE02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 316

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+    A  LP+  KR    ILD+ TG+G + +A  ++ P      VD+S  A
Sbjct: 123 PRSPIGALIQDGFAGLLPKAPKR----ILDMCTGSGCIAIACAEQFPEADVDAVDLSLDA 178

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ N     +S R   +QSD FS  +E  +D+IV+NPPY++      +  E   ++P
Sbjct: 179 LNVAEINIERYNLSHRVFPIQSDLFSQLLEEQYDLIVTNPPYVDLDDRSDMPEEFH-YEP 237

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            ++L  G DGL+  + I      +L  DG+   E+G N  V ++  F +
Sbjct: 238 EMALGSGDDGLTITKQILRQAVNYLTDDGVLVCEVG-NSMVHLIEQFPN 285


>gi|109897861|ref|YP_661116.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas atlantica T6c]
 gi|109700142|gb|ABG40062.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudoalteromonas atlantica T6c]
          Length = 309

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             ILDL TG G + +AL           VDIS +ALE+A+ N   + +S+R   +QSD  
Sbjct: 139 THILDLCTGGGCIAIALAYAFESATVDAVDISPEALEVAEMNIHEHQLSDRVYPIQSDLM 198

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +++EG  +D+I+SNPPY+++  +  L  E    +P ++L  G DGL     +      HL
Sbjct: 199 AALEGQKYDLIISNPPYVDAEDMADLPEEFH-HEPELALAAGDDGLDLVHKMLRQAPAHL 257

Query: 218 NKDGLCSVEIGYNQ 231
             DG   VE+G +Q
Sbjct: 258 TDDGWLFVEVGNSQ 271


>gi|262279012|ref|ZP_06056797.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259363|gb|EEY78096.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|299067442|emb|CBJ38641.1| putative adenine-specific methylase [Ralstonia solanacearum CMR15]
          Length = 300

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 11/168 (6%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L   + P      VD+S  AL +A+ N    G+++     + D +
Sbjct: 137 VLELCTGSG--CLAILAALQWPNATLDAVDLSPDALVVAQRNVDNYGLNDSIRLHEGDLY 194

Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +     +DVI++NPPY+    +  L  E R  +PR++L GG DG+   R I     RH
Sbjct: 195 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 253

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G+  VEIG N++ +V   F    L          G+D+V L  R
Sbjct: 254 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGDDQVFLVTR 297


>gi|262404464|ref|ZP_06081019.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
 gi|262349496|gb|EEY98634.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
          Length = 310

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 250 LYLKENGILVCEVG 263


>gi|317474401|ref|ZP_07933675.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909082|gb|EFV30762.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 278

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 107/264 (40%), Gaps = 12/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R L  E I  I G   F 
Sbjct: 20  EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 80  ERSYHVAPGVLIPRPETEELVEVMLR------EIPSDARILDIGTGSGCIAISLSKAFPN 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            K    D+S  AL IA+ N      S  F   D L   W       +DVIVSNPPYI   
Sbjct: 134 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WRGDGGQCYDVIVSNPPYITES 191

Query: 179 IVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR I +     L   G    EI          
Sbjct: 192 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           +   +    +   KD  GNDR ++
Sbjct: 252 MLCGQGYTGIRILKDISGNDRFVI 275


>gi|261868313|ref|YP_003256235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413645|gb|ACX83016.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 316

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 7/169 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+    A  LP+  KR    ILD+ TG+G + +A  ++ P      VD+S  A
Sbjct: 123 PRSPIGALIQDGFAGLLPKAPKR----ILDMCTGSGCIAIACAEQFPEADVDAVDLSLDA 178

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ N     +S R   +QSD FS +    +D+IV+NPPY++      +  E   ++P
Sbjct: 179 LNVAEINIERYNLSRRVFPIQSDLFSQLLAEQYDLIVTNPPYVDLDDRSDMPEEFH-YEP 237

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            ++L  G DGL+  + I    + +L  DG+   E+G N  V ++  F S
Sbjct: 238 EMALGSGDDGLTITKQILRQAANYLTDDGVLVCEVG-NSMVHLIEQFPS 285


>gi|94499014|ref|ZP_01305552.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65]
 gi|94428646|gb|EAT13618.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65]
          Length = 305

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL  G+G + +A L+  P  +    D+S  AL++A+ N   +G+ ++   +QSD F+
Sbjct: 134 RILDLCCGSGCIGIASLQAFPDAQLDLADLSRDALDVAEINIDHHGLWQQVAAIQSDLFN 193

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            ++  +D+IVSNPPY++   +  +  E +  +P + L  G+DGL   R I    + +LN 
Sbjct: 194 ELQPGYDLIVSNPPYVDEEDLSAMPDEYQ-HEPAMGLGSGVDGLDITRKILAQAADYLND 252

Query: 220 DGLCSVEIG 228
            GL  VE+G
Sbjct: 253 GGLLVVEVG 261


>gi|260554187|ref|ZP_05826445.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|260404693|gb|EEW98205.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFA 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|77747543|ref|NP_298657.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa 9a5c]
          Length = 308

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P +   G DIS  AL +A  N V   ++   
Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 181

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 HL+++GL   E+G +++  +VR+ 
Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ-QLVRLL 269


>gi|78066811|ref|YP_369580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia sp. 383]
 gi|77967556|gb|ABB08936.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia sp. 383]
          Length = 302

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVAEINVRDYGLEDRVG 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRTDPGSRYDVILTNPPYVNASSMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     R L+ DG+  VEIG N++ +V   F   +L          G+D V L 
Sbjct: 240 IVRRIVAEAHRWLHDDGVLVVEIG-NERENVEAAFGGLEL---TWLPTSAGDDAVFLI 293


>gi|253689188|ref|YP_003018378.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755766|gb|ACT13842.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 310

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS  A
Sbjct: 113 PRSPIGELINNYFDEQLPKAPNH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+  R   ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263


>gi|308177037|ref|YP_003916443.1| methylase of peptide chain release factors [Arthrobacter
           arilaitensis Re117]
 gi|307744500|emb|CBT75472.1| putative methylase of peptide chain release factors [Arthrobacter
           arilaitensis Re117]
          Length = 285

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 106/257 (41%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   LC V G+S  ++ +        D   R   T  +        +  + G   F  +
Sbjct: 26  DADLLLCHVLGISRSELKLRQMRGDAFDPAYRQQFTELVAARRTRIPLQHLTGVAHFRYL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETE +V   + +     +  D  R +DL +G+GA+  AL  E P   
Sbjct: 86  ELKVGPGVFIPRPETETVVQQGIDYL--HAQGIDNPRCIDLCSGSGAIAAALASEVPGSS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              V++S +A+   ++N   + V+       S   + + G  D+++SNPPYI    +   
Sbjct: 144 VWAVELSEQAIGYTRANCQPHQVN-VLHQDASQLPAELHGTMDLVISNPPYIPPNAIPRE 202

Query: 184 GLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             EVR+ DP+++L G G DGL   R I       L   G   +E    Q+     +    
Sbjct: 203 A-EVREHDPQMALYGLGEDGLQIPRAITAQAMALLRPGGYYVMEHAEVQRESAAAMLREA 261

Query: 243 KLFLVNAFKDYGGNDRV 259
               V   +D  G  R 
Sbjct: 262 GFTHVAGHEDLSGRARA 278


>gi|292490418|ref|YP_003525857.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
 gi|291579013|gb|ADE13470.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
          Length = 312

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 2/165 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +    V  +LDL TG+G + +A     P  +    DIS +AL +A+ N   +G+ ++ 
Sbjct: 128 PFVSPERVHTLLDLCTGSGCIAIAATYAFPQAQVDATDISQEALAVARLNIERHGLQDQV 187

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            TL S+ F  + E  +D+IVSNPPY+    +  L  E    +PR +L+   +GLS    I
Sbjct: 188 HTLPSNLFEGLKERRYDLIVSNPPYVGETELASLPKEYHH-EPRQALEAEDEGLSLVLQI 246

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                 HLN+ G+  VE+G ++     R+ E   L+L      YG
Sbjct: 247 LLQAPDHLNEQGILIVEVGNSEAALTRRLPEVPFLWLEFERGGYG 291


>gi|114320027|ref|YP_741710.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226421|gb|ABI56220.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 309

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 3/140 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +    V R+LD+GTG G + +A     P  +   VDIS  AL++A+ N   + + ER 
Sbjct: 125 PWLSTDHVHRVLDVGTGGGCIAIACAYAFPQARVDAVDISRDALDVAEINVQRHHLEERV 184

Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             + SD F  +  E  +++I+SNPPY+++  +  L  E R  +PR+ L+ G DGL   R 
Sbjct: 185 ALIPSDLFDGLPRENRYELIISNPPYVDARDMSDLAPEFR-HEPRLGLEAGDDGLDLVRR 243

Query: 209 IADGVSRHLNKDGLCSVEIG 228
           +       L ++G+  VE+G
Sbjct: 244 LLARAGDFLTEEGILVVEVG 263


>gi|327402057|ref|YP_004342895.1| protein-(glutamine-N5) methyltransferase [Fluviicola taffensis DSM
           16823]
 gi|327317565|gb|AEA42057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fluviicola taffensis DSM 16823]
          Length = 284

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 17/219 (7%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLG 105
           E    I+G+  F ++++ ++     PRPETE L   +   +    P IE        D  
Sbjct: 70  EPYQYIVGFTYFDDLKINVAPGVLIPRPETEELTAWIQDTMQLKNPIIE--------DWC 121

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVE 162
           TG+G +  AL    P     G DIS +ALEIA+ N   NG++      + D  S   S  
Sbjct: 122 TGSGCIAFALKNRIPNAIVSGFDISEEALEIARKNG--NGLNLNVQFEKRDALSILVSGN 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221
              D+IVSNPPYI  +    +   V  F+P ++L     D L  YR +AD  S  LN DG
Sbjct: 180 EKVDLIVSNPPYIPWIEKMEMHQNVTAFEPDLALFVPNEDPLLFYRKLADYASASLNTDG 239

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               E+  N       + E      V   +D  G  R+L
Sbjct: 240 YLFFELHENFATQTKEMVEKLGFHPVEIREDLQGKSRML 278


>gi|299770295|ref|YP_003732321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. DR1]
 gi|298700383|gb|ADI90948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. DR1]
          Length = 334

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|18203346|sp|Q9PDL1|Y1368_XYLFA RecName: Full=Uncharacterized adenine-specific methylase XF_1368
 gi|9106371|gb|AAF84177.1|AE003968_8 adenine-specific methylase [Xylella fastidiosa 9a5c]
          Length = 312

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P +   G DIS  AL +A  N V   ++   
Sbjct: 127 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 185

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 186 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 244

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 HL+++GL   E+G +++  +VR+ 
Sbjct: 245 LRDAPAHLDEEGLLICEVGESEQ-QLVRLL 273


>gi|225548516|ref|ZP_03769564.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a]
 gi|225370779|gb|EEH00214.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a]
          Length = 286

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +   L+     PR +TE LV+ AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|32130318|sp|Q87DS5|Y606_XYLFT RecName: Full=Uncharacterized adenine-specific methylase PD_0606
 gi|28056599|gb|AAO28478.1| adenine-specific methylase [Xylella fastidiosa Temecula1]
          Length = 312

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P ++  G DIS  AL +A  N V   ++   
Sbjct: 127 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 185

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 186 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 244

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL+++GL   E+G +++
Sbjct: 245 LRDAPAHLDEEGLLICEVGESEQ 267


>gi|221217540|ref|ZP_03589010.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a]
 gi|225549802|ref|ZP_03770766.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a]
 gi|221192603|gb|EEE18820.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a]
 gi|225369610|gb|EEG99059.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a]
          Length = 286

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +   L+     PR +TE LV+ AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|77747651|ref|NP_778829.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa Temecula1]
 gi|182681193|ref|YP_001829353.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa M23]
 gi|182631303|gb|ACB92079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Xylella fastidiosa M23]
 gi|307579639|gb|ADN63608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 308

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P ++  G DIS  AL +A  N V   ++   
Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 181

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL+++GL   E+G +++
Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ 263


>gi|301156164|emb|CBW15635.1| N5-glutamine methyltransferase [Haemophilus parainfluenzae T3T1]
          Length = 314

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 7/181 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +   T  PR     L+    A  L    K +  RILDL TG+G + +A  +  
Sbjct: 108 FCGLEFYVDERTIIPRSPISALIQDKFAPLL----KSEPKRILDLCTGSGCIAIATAEAF 163

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  +   VD+S  AL +A+ N   + +  R   +QSD F ++ G  +D+IV+NPPY++  
Sbjct: 164 PEAEVDAVDLSVDALNVAEINIARHQLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEE 223

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  +  E   ++P ++L  G+DGL   + I      +L ++G+   E+G N  V ++  
Sbjct: 224 DLADMPEEFH-YEPELALGSGVDGLEITKQILKQAPDYLTQNGMLVCEVG-NSMVSLIEQ 281

Query: 239 F 239
           +
Sbjct: 282 Y 282


>gi|71274842|ref|ZP_00651130.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71901443|ref|ZP_00683532.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|170729912|ref|YP_001775345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa M12]
 gi|71164574|gb|EAO14288.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71728782|gb|EAO30924.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|167964705|gb|ACA11715.1| Site-specific DNA-methyltransferase (adenine-specific) [Xylella
           fastidiosa M12]
          Length = 308

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P +   G DIS  AL +A  N V   ++   
Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWSVDGADISEDALSLALENKV-RLLAHNV 181

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL+++GL   E+G +++
Sbjct: 241 LRDAPAHLDEEGLLICEVGESEQ 263


>gi|167846309|ref|ZP_02471817.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei B7210]
          Length = 307

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 VDGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|325961839|ref|YP_004239745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467926|gb|ADX71611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 271

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 9/199 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +    +  ILGW  F   R+++ +  F PR  TELLV  A+   L       
Sbjct: 45  LAGWVDRRVNGVPLEHILGWAGFDGGRISVDAGVFVPRRRTELLVHEAVRL-LHHASSAS 103

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GAV  A+ +  P  +    DI   A+E A+ N    G        Q D 
Sbjct: 104 RGVVVDLCCGSGAVGAAIARRRPDIELHAADIDPAAVECARRNVNAFGA----HVHQGDL 159

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F ++         V+  N PY+ +  +  +  E R F+P  +LDGG DGL  +R I+ G 
Sbjct: 160 FEALPLRLRDRVQVLAVNAPYVPTGAIAAMPPEARVFEPHTALDGGADGLDFHRRISAGA 219

Query: 214 SRHLNKDGLCSVEIGYNQK 232
              +   G   +E   +Q 
Sbjct: 220 LEWIAPVGHLLIETSRHQS 238


>gi|229024782|ref|ZP_04181218.1| Modification methylase, HemK [Bacillus cereus AH1272]
 gi|228736493|gb|EEL87052.1| Modification methylase, HemK [Bacillus cereus AH1272]
          Length = 232

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV    A S      R    I+DL  G+GA
Sbjct: 23  LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 76

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V  AL       +   VDI   A++ A  N VTN     F+  L      S++G  +++V
Sbjct: 77  VGAALASALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 135

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ + I+  L  E R  +P ++LDGG DGL+  R +A+     L  DG   +E   
Sbjct: 136 ANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIEASE 195

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF +  L
Sbjct: 196 VQAPQACEIFAAAGL 210


>gi|209521621|ref|ZP_03270317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. H160]
 gi|209497948|gb|EDZ98107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. H160]
          Length = 294

 Score = 76.6 bits (187), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 11/176 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N +   + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFQNADVDAVDLSAPALEVATRNVMDYHLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DV++SNPPY+ +  +  L  E +  +P ++L GG+DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVVISNPPYVNAASMQELPAEYK-HEPEMALAGGMDGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R I       L +DG+  +EIG N++  V   F    L  ++      G+D V L 
Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NEREHVEAAFGGLDLVWLST---SAGDDNVFLI 287


>gi|229018524|ref|ZP_04175384.1| Modification methylase, HemK [Bacillus cereus AH1273]
 gi|228742765|gb|EEL92905.1| Modification methylase, HemK [Bacillus cereus AH1273]
          Length = 258

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV    A S      R    I+DL  G+GA
Sbjct: 49  LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 102

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V  AL       +   VDI   A++ A  N VTN     F+  L      S++G  +++V
Sbjct: 103 VGAALASALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 161

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ + I+  L  E R  +P ++LDGG DGL+  R +A+     L  DG   +E   
Sbjct: 162 ANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIEASE 221

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF +  L
Sbjct: 222 VQAPQACEIFAAAGL 236


>gi|77166384|ref|YP_344909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|76884698|gb|ABA59379.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
          Length = 299

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 7/162 (4%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+      F+ P      +  +LDL TG+G + +A     P  +    DIS +
Sbjct: 110 PRSPLAELIAQRFAPFAFPE----SIHSLLDLCTGSGCIAIAAAHAFPEAQVDATDISEE 165

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL +A+ N   +G+  +     S  F  + G  +D+IVSNPPY+    +  L  E    +
Sbjct: 166 ALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQTELAALAREYHH-E 224

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           PR +L+   DGLS    I      HLN+ G+  VE+G ++  
Sbjct: 225 PRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEAA 266


>gi|171319301|ref|ZP_02908414.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MEX-5]
 gi|171095483|gb|EDT40450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MEX-5]
          Length = 302

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S  ALE+A+ N    G+ ER  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDNALEVARINVRDYGLDERIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     + L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293


>gi|258626193|ref|ZP_05721041.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262166219|ref|ZP_06033956.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
 gi|262170895|ref|ZP_06038573.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
           MB-451]
 gi|258581548|gb|EEW06449.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|261891971|gb|EEY37957.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
           MB-451]
 gi|262025935|gb|EEY44603.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
          Length = 310

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 250 LYLKENGVLVCEVG 263


>gi|224438090|ref|ZP_03659029.1| DNA methylase HemK [Helicobacter cinaedi CCUG 18818]
          Length = 278

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 12/238 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
            SV   + + FL+    R+ K + I  I     FY     ++     PRPE+E+L+  A 
Sbjct: 52  QSVNPTQAKHFLSLVEERA-KGKPIEYITQSASFYEHTFYVNDSVLIPRPESEILIQKAS 110

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 I + ++  I ++G G+G + + L    P  +    DIS KALE+ + N  +   
Sbjct: 111 EI----ITRHNIESIAEVGIGSGILSITLSLLHPQCRFFATDISQKALEVTQKNIHSLAP 166

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                        S     ++I+SNPPYI       L L    ++P I+L GG DGL   
Sbjct: 167 DSNITLKHCSLLPSSWQDIELIISNPPYICDDYPISLPL---TYEPSIALFGGKDGLDIL 223

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +   +    N+      EIGY+QK  + +I        +  +KD  G DR   +CR
Sbjct: 224 KAL---IVEAKNRKAFLLCEIGYDQKNALEQILTQHNAKDIEFYKDLSGLDRG-FWCR 277


>gi|262372606|ref|ZP_06065885.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter junii SH205]
 gi|262312631|gb|EEY93716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter junii SH205]
          Length = 336

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAFPDSEVDATDISKEALEVASINTEHHNKQYQVALLESDLFA 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|193077327|gb|ABO12120.2| putative adenine-specific methylase [Acinetobacter baumannii ATCC
           17978]
          Length = 334

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F 
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|254435800|ref|ZP_05049307.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
 gi|207088911|gb|EDZ66183.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
          Length = 303

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 7/175 (4%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+      F+ P      +  +LDL TG+G + +A     P  +    DIS +
Sbjct: 114 PRSPLAELIAQRFAPFAFPE----SIHSLLDLCTGSGCIAIAAAHAFPEAQVDATDISEE 169

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL +A+ N   +G+  +     S  F  + G  +D+IVSNPPY+    +  L  E    +
Sbjct: 170 ALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQTELAALAREYHH-E 228

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           PR +L+   DGLS    I      HLN+ G+  VE+G ++   +  + +   L+L
Sbjct: 229 PRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEAALIEHLPQVPFLWL 283


>gi|169633548|ref|YP_001707284.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii SDF]
 gi|169152340|emb|CAP01264.1| putative adenine-specific methylase [Acinetobacter baumannii]
          Length = 334

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F 
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|313144534|ref|ZP_07806727.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313129565|gb|EFR47182.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 280

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 12/238 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
            SV   + + FL+    R+ K + I  I     FY     ++     PRPE+E+L+  A 
Sbjct: 54  QSVNPTQAKHFLSLVEERA-KGKPIEYITQSASFYEHTFYVNDSVLIPRPESEILIQKAS 112

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 I + ++  I ++G G+G + + L    P  +    DIS KALE+ + N  +   
Sbjct: 113 EI----ITRHNIESIAEVGIGSGILSITLSLLHPQCRFFATDISQKALEVTQKNIHSLAP 168

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                        S     ++I+SNPPYI       L L    ++P I+L GG DGL   
Sbjct: 169 DSNITLKHCSLLPSSWQDIELIISNPPYICDDYPISLPL---TYEPSIALFGGKDGLDIL 225

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +   +    N+      EIGY+QK  + +I        +  +KD  G DR   +CR
Sbjct: 226 KAL---IVEAKNRKAFLLCEIGYDQKNALEQILTQHNAKDIEFYKDLSGLDRG-FWCR 279


>gi|169796031|ref|YP_001713824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AYE]
 gi|184158049|ref|YP_001846388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii ACICU]
 gi|213157235|ref|YP_002319280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB0057]
 gi|215483488|ref|YP_002325705.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB307-0294]
 gi|239501832|ref|ZP_04661142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB900]
 gi|260555080|ref|ZP_05827301.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii ATCC 19606]
 gi|301346168|ref|ZP_07226909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB056]
 gi|301513156|ref|ZP_07238393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB058]
 gi|301596746|ref|ZP_07241754.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB059]
 gi|332851680|ref|ZP_08433605.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013150]
 gi|332865945|ref|ZP_08436725.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013113]
 gi|332874509|ref|ZP_08442412.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6014059]
 gi|169148958|emb|CAM86833.1| putative adenine-specific methylase [Acinetobacter baumannii AYE]
 gi|183209643|gb|ACC57041.1| Methylase of polypeptide chain release factors [Acinetobacter
           baumannii ACICU]
 gi|213056395|gb|ACJ41297.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB0057]
 gi|213987164|gb|ACJ57463.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB307-0294]
 gi|260411622|gb|EEX04919.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii ATCC 19606]
 gi|322508368|gb|ADX03822.1| Putative adenine-specific methylase [Acinetobacter baumannii
           1656-2]
 gi|323517990|gb|ADX92371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii TCDC-AB0715]
 gi|332729687|gb|EGJ61022.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013150]
 gi|332734995|gb|EGJ66081.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013113]
 gi|332737353|gb|EGJ68277.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6014059]
          Length = 334

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F 
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 278 TEDGLIVIEVG 288


>gi|258621119|ref|ZP_05716153.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586507|gb|EEW11222.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 314

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLEQQVFPIRS 194

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 254 LYLKENGVLVCEVG 267


>gi|116330130|ref|YP_799848.1| methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116123819|gb|ABJ75090.1| Methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 286

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   ++ V+ + +L + ++      IV   K++    I G + FYN   
Sbjct: 29  DAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYNSVF 88

Query: 66  TLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++     PRPETE LV+  L  F     E+     +LDL TG+G + ++L      +  
Sbjct: 89  FVNEKVLIPRPETEELVEKILLDFKGNNSEQ----NVLDLCTGSGCIGISLKSARKDWNI 144

Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
              DIS  ALEIAK NA+   G       L+S+ F S+  E  FD+IV+NPPYI      
Sbjct: 145 TLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISDKT 204

Query: 182 CLGLEVRDFDPRISL 196
            +  +V D++P ++L
Sbjct: 205 AMMKDVVDYEPHLAL 219


>gi|227327270|ref|ZP_03831294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 310

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS +A
Sbjct: 113 PRSPIGELINNYFDEQLPKTPSH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSEA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+  R   ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMFDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263


>gi|254297194|ref|ZP_04964647.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e]
 gi|157807674|gb|EDO84844.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e]
          Length = 307

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N   +G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|126641738|ref|YP_001084722.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii ATCC 17978]
          Length = 251

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F 
Sbjct: 76  RILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFE 135

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 136 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 194

Query: 218 NKDGLCSVEIG 228
            +DGL  +E+G
Sbjct: 195 TEDGLIVIEVG 205


>gi|53805109|ref|YP_113211.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylococcus capsulatus str. Bath]
 gi|53758870|gb|AAU93161.1| modification methylase, HemK family [Methylococcus capsulatus str.
           Bath]
          Length = 321

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 2/147 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G + +A  +  P  +   VDIS  ALE+A  N   +G+ E    + SD +  
Sbjct: 136 VLDLCTGSGCIAIACAEAFPQARVDAVDISGGALEVAGMNVRAHGLEETVRLVHSDLYQQ 195

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++G  +D+IVSNPPY+       L  E    +PR+ L+ G DGL   R I  G +  L  
Sbjct: 196 LDGSRYDLIVSNPPYVNLQEWRALPPEYHA-EPRLGLESGEDGLDCIRRILAGAADRLKP 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL 246
            G+  VE+G + +       E   L+L
Sbjct: 255 GGVLVVEVGSSAEALAAAFPEVEFLWL 281


>gi|126453622|ref|YP_001066767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|242317080|ref|ZP_04816096.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106b]
 gi|126227264|gb|ABN90804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106a]
 gi|242140319|gb|EES26721.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106b]
          Length = 307

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N   +G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNDGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|258544124|ref|ZP_05704358.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Cardiobacterium hominis ATCC 15826]
 gi|258520632|gb|EEV89491.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Cardiobacterium hominis ATCC 15826]
          Length = 299

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 7/157 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISC 131
           PR     L+   LA   P+ E  +  RILDL  G+G  CL +L +   P  + V  D+  
Sbjct: 104 PRSPIAELIARDLAPWWPQGEAPE--RILDLCCGSG--CLGILAQLQQPQAEVVLADLDT 159

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            AL++A+ N     +S+  +  Q D  ++V G FD I+ NPPY+E+  +D +  E R  +
Sbjct: 160 DALDVARLNLARYNMSDVVEICQGDGLAAVRGQFDWIICNPPYVEAAEMDDIATEYR-HE 218

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PR +L  G DGL   R +      +L + GL  +E+G
Sbjct: 219 PRQALVSGEDGLDFTRRLLHEAPDYLTERGLLVLEVG 255


>gi|152965227|ref|YP_001361011.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
 gi|151359744|gb|ABS02747.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
          Length = 285

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 7/213 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  + G   F  + L +    F PRPETE +   A+  +   +       ++DL TG+G
Sbjct: 69  PLQHLTGRAGFRALELHVGPGVFVPRPETETVAQLAVDEAQRLVAAGRFPTVVDLCTGSG 128

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFD 166
           A+ LA+  E P      V++   A   A+ N   + ++ R D  + D    F+ ++G  D
Sbjct: 129 AIALAVATEVPRAAVHAVELDPMAHAWARRN--VDAIAPRVDLREGDAGTAFADLDGRVD 186

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+VSNPPY+    V  L  EV   DP ++L G G DGL   R +    +R L   G   V
Sbjct: 187 VVVSNPPYVPPGAVP-LDPEVALHDPEVALYGLGDDGLLVPRRVVAAAARLLVPGGYVVV 245

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           E    Q+     +F       V + +D  G  R
Sbjct: 246 EHAEVQERSARALFAGPAWTGVESHRDLTGRPR 278


>gi|328675473|gb|AEB28148.1| Adenine-specific methylase [Francisella cf. novicida 3523]
          Length = 314

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTL 153
           DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + +S+R   +
Sbjct: 135 DVTSVLDLCTGSGCIGIAC---SNVFEEANITLVDISDDALAVANHNIKKHQLSDRVRAI 191

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +SD F ++ G  FD+IVSNPPY++   ++ +  E   ++P+++L+ G DGL   + I   
Sbjct: 192 KSDLFDNLHGQKFDLIVSNPPYVDKEDLNSMPQEYH-YEPKLALEAGDDGLELAKKIILE 250

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             +++ ++G+  VE+G +Q
Sbjct: 251 ADQYMTENGVLIVEVGNSQ 269


>gi|308050332|ref|YP_003913898.1| (50S ribosomal protein L3P)-glutamine N5-methyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307632522|gb|ADN76824.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Ferrimonas balearica DSM 9799]
          Length = 311

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 2/139 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A        +   VDIS  ALE+A+ N   +G+ ER 
Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYAFENAEVDAVDISDDALEVAQINIEQHGMLERV 186

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             +QSD F+++EG  +D+IVSNPPY+++  +  L  E    +P + L  G DGL   + I
Sbjct: 187 FPIQSDGFTALEGQKYDLIVSNPPYVDAEDMGDLPEEFH-HEPELGLASGRDGLDLTKRI 245

Query: 210 ADGVSRHLNKDGLCSVEIG 228
               + HL  DG+  VE+G
Sbjct: 246 LARAADHLTDDGILIVEVG 264


>gi|167837055|ref|ZP_02463938.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 307

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  ALE+AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALEVAKINRDDYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER    + D ++ +           +D I++NPPY+ S  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYRGDLYAPLPQFKWIDPAQRYDAIITNPPYVNSDSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DG+   R I     R L  DG+  VEIG N++ +V   F    L  +       G+D V
Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLDLVWL---PTSAGDDSV 294

Query: 260 LLF 262
            L 
Sbjct: 295 FLI 297


>gi|262376567|ref|ZP_06069796.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter lwoffii SH145]
 gi|262308706|gb|EEY89840.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter lwoffii SH145]
          Length = 336

 Score = 76.3 bits (186), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS +ALE+A+ N   +    +   L+SD F 
Sbjct: 159 RILDMCTGSGCIAIALAYAFPEAEVDATDISKEALEVAQINTEHHDKQYQIALLESDLFE 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFH-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
            ++GL  +E+G
Sbjct: 278 TENGLIVIEVG 288


>gi|289209006|ref|YP_003461072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thioalkalivibrio sp. K90mix]
 gi|288944637|gb|ADC72336.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thioalkalivibrio sp. K90mix]
          Length = 306

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 93/194 (47%), Gaps = 11/194 (5%)

Query: 74  PR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR P  EL+   A+ F  P IE   V R+LDL TG G + +A     P  +    D+S  
Sbjct: 118 PRSPLAELI---AVGFE-PWIEAASVERVLDLCTGGGCIGIATALALPQAQVDLSDVSEP 173

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           AL +A  N   + V +R     SD   ++  E  +D+IVSNPPY+++  +  L  E R  
Sbjct: 174 ALAVAARNIERHDVGDRVQVRHSDVLDALGPEDRYDLIVSNPPYVDARDMAELPQEYR-H 232

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P + L  G DGL   R I     RHL +DG   VE+G +Q   V   F    L  +   
Sbjct: 233 EPELGLAAGEDGLDIVRRILADARRHLTEDGALIVEVGNSQPA-VEEAFPDLPLIWLE-- 289

Query: 251 KDYGGNDRVLLFCR 264
            + GG+   L + R
Sbjct: 290 FESGGHGVFLAYAR 303


>gi|332529216|ref|ZP_08405180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
 gi|332041439|gb|EGI77801.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
          Length = 307

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            EL+ D+    +L      D   +LDL TG G++ +      P  +  G DIS +AL +A
Sbjct: 110 AELIADADGQGTLDAWLGEDTSAVLDLCTGNGSLAVLAALAWPEVRVDGADISDEALAVA 169

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N   +G+ ER   L+SD  + V   +D+I+ NPPY+    +  L  E R  +P ++L 
Sbjct: 170 RINIDKHGLQERVQLLKSDGLAQVARSYDLILCNPPYVNQQSMTALPAEYR-AEPELALA 228

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF---ESRKLFLVNAFKDYG 254
           GG DG+   R +       ++   +  +EIG N++      F    +R ++L  +     
Sbjct: 229 GGADGMDFIRRLLRDAPARMSAHAVLVLEIG-NEREHYEAAFPALAARTVWLDTS----A 283

Query: 255 GNDRVLLFCR 264
           G D+VLL  R
Sbjct: 284 GADQVLLLTR 293


>gi|145298911|ref|YP_001141752.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851683|gb|ABO90004.1| adenine-specific methylase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 313

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 15/176 (8%)

Query: 56  GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           GW  + + R+ +      PR P  E++ +    F      K +  RI+DL TG+G + + 
Sbjct: 103 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 151

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNP 172
           +  E P  +   +DIS  AL +A+ N   +G+ ++   ++SD      V   +D+IVSNP
Sbjct: 152 MAHEFPDAEVDAIDISVDALNVAERNITDHGLEQQVIPIRSDLMRDLPVGDKYDLIVSNP 211

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY++S  +  L  E R  +P ++L  G DGL   + +    +  L  DG+  VE+G
Sbjct: 212 PYVDSEDMSDLPQEFR-HEPELALASGSDGLKLTKRLLANAADFLKDDGVLVVEVG 266


>gi|71899856|ref|ZP_00682005.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71730373|gb|EAO32455.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 308

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  RDV   LDL TG+G + +A+   +P ++  G DIS  AL +A  N V   ++   
Sbjct: 123 PWLAGRDVRHALDLCTGSGCIAIAMGHYNPHWRVDGSDISEDALSLALENKV-RLLAHNV 181

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           + ++SD F+ + G  + +IVSNPPY+     D L  E   ++P + L  G DGL+    I
Sbjct: 182 ELIKSDVFAGLVGRRYQLIVSNPPYVTDAETDALPQEY-GYEPELGLRAGPDGLNLVLKI 240

Query: 210 ADGVSRHLNKDGLCSVEIGYNQK 232
                 HL+++GL   E+G +++
Sbjct: 241 LCDAPAHLDEEGLLICEVGESEQ 263


>gi|260767691|ref|ZP_05876626.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
           102972]
 gi|260617200|gb|EEX42384.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
           102972]
 gi|315179477|gb|ADT86391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio furnissii NCTC 11218]
          Length = 310

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD F
Sbjct: 134 TRIMDLCTGSGCIAIACAHAFPDAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRSDLF 193

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + +  +D+IV+NPPY++   ++ L  E +  +P + L  G DGL   R I      +L
Sbjct: 194 RDLPQAPYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLVRRIMANAPNYL 252

Query: 218 NKDGLCSVEIG 228
             +G+   E+G
Sbjct: 253 TDNGILVCEVG 263


>gi|254497889|ref|ZP_05110654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella drancourtii LLAP12]
 gi|254352887|gb|EET11657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella drancourtii LLAP12]
          Length = 305

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 80/144 (55%), Gaps = 2/144 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P I+  +V R+LDL TG+G + +A     P      VDIS +AL +A  N    GV ++ 
Sbjct: 126 PWIDAGNVHRVLDLCTGSGCIAIACCYAFPDAHVDAVDISSEALAVAAINREELGVEDQL 185

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             + SD F++V  + +D+IVSNPPY+    +  L  E R  +P ++L+   +GL+   TI
Sbjct: 186 TLIDSDCFANVPKVRYDLIVSNPPYVGKEEMQTLPDEFR-HEPVLALETSNNGLAIVETI 244

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKV 233
                 +L++ G+  VE+G +++ 
Sbjct: 245 LKEAHAYLSEQGILVVEVGNSEEA 268


>gi|255645193|gb|ACU23094.1| unknown [Glycine max]
          Length = 364

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 18/185 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLA 114
           WRD     L++      PRPETELLVD          E  D+ R    DLGTG+GA+ + 
Sbjct: 152 WRDLV---LSVQEGVLIPRPETELLVDFVDDVV---SENEDLKRGVWADLGTGSGALAIG 205

Query: 115 ----LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDV 167
               L  E    + +  D+S  A+ +A  N       ++ +  +  WF     +EG+   
Sbjct: 206 IGGVLGSEG---RVIATDLSPVAVAVAAYNVQGYCFQDKIELREGSWFEPLKDMEGMLAG 262

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +VSNPPYI S  +  L  EV   +PR++LDGG DG+     + DG +  L   G  + E 
Sbjct: 263 LVSNPPYIPSKDISGLQAEVGRHEPRVALDGGTDGMDALLHLCDGAALMLKPAGFSAFET 322

Query: 228 GYNQK 232
              Q+
Sbjct: 323 NGEQQ 327


>gi|149195280|ref|ZP_01872368.1| modification methylase, HemK family protein [Caminibacter
           mediatlanticus TB-2]
 gi|149134544|gb|EDM23032.1| modification methylase, HemK family protein [Caminibacter
           mediatlanticus TB-2]
          Length = 273

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 36/230 (15%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA------------FSLP-----RI 93
           I  I    +FY  +  +      PR +TE++V+ AL             F +      + 
Sbjct: 52  IEYIFNEIEFYGKKYYVKEGVLIPRDDTEVIVERALKLLDEELKVKSKKFKINDKLNVKN 111

Query: 94  EKRDV----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           EK ++    ++I+D  +G+G + + + +  P  + V  DIS KA+E+AK NA  + V  +
Sbjct: 112 EKLEINNEKLKIVDCCSGSGVIAITIKQYFPDIEVVATDISDKAIEVAKKNAKLHNVDIK 171

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           F   + + F   +G  D+++SNPPY+E+        +  D++P I+  GG+DGL   R I
Sbjct: 172 FK--KCNLFDE-KG--DILISNPPYVENSYP-----KPNDYEPDIAFYGGVDGLDIVREI 221

Query: 210 ADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              + R  N +     +EIGYNQK ++ +  E  K+     FKD   N R
Sbjct: 222 ---ILRAKNLEYKYAIIEIGYNQKENLSKFLED-KVKEYEFFKDLARNIR 267


>gi|257095184|ref|YP_003168825.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257047708|gb|ACV36896.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 297

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 6/135 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG+   CLA++    F       VD+S  AL +A+ N     ++ R   ++ D F
Sbjct: 134 VLDLCTGSA--CLAIIAAHAFPAARIDAVDVSPDALVVARRNVEDYDLATRIRLVEGDLF 191

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + + +  +D+I++NPPY+++  +  L  E R  +P ++L  G DGL   R I  G  +HL
Sbjct: 192 AGLKQRRYDLIIANPPYVKASSMATLPDEYRR-EPELALASGEDGLDLTRAILAGARKHL 250

Query: 218 NKDGLCSVEIGYNQK 232
             +GL  VEIG+N++
Sbjct: 251 KANGLLVVEIGHNRE 265


>gi|255071039|ref|XP_002507601.1| methyltransferase [Micromonas sp. RCC299]
 gi|226522876|gb|ACO68859.1| methyltransferase [Micromonas sp. RCC299]
          Length = 428

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 47/234 (20%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCL 113
           WRD     L +S     PRPETEL+V+         +  R V+     +DLGTG+GA+ +
Sbjct: 181 WRDLT---LVVSPAVLIPRPETELMVEHVKGA----LTTRPVLCRGPWVDLGTGSGALAI 233

Query: 114 ALLKE-----------------SPFFKGVGVDISCKALEIAKSN-----AVTNGVSERFD 151
           ++  E                  P    V  DIS  +++IA+ N      +  G      
Sbjct: 234 SVAAEILKTRTLNALEIGCSESKPLVHAV--DISSSSVQIARCNISRYDKLAEGGKLGVQ 291

Query: 152 TLQSDWFSSVE---------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             Q  WF  +E         G    I+SNPPYI S  +  L  EVR  +P ++L+ G  G
Sbjct: 292 VHQGSWFEPLELQDIVHDRAGTLAGIISNPPYISSNEMRVLQPEVRYHEPWLALESGKSG 351

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVRIFESRKLFLVNAFKDYGG 255
           +     +  G SR+L   G   +E G   +V  VV++  S   F     ++ GG
Sbjct: 352 VEALEVLCKGASRYLLPGGFLLLETGGGDQVTHVVQLLHS---FKKGNLRENGG 402


>gi|229522071|ref|ZP_04411488.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
 gi|229340996|gb|EEO06001.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
          Length = 314

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++S
Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 194

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 254 LYLKENGILVCEVG 267


>gi|312601124|gb|ADQ90379.1| Protoporphyrinogen oxidase-like protein [Mycoplasma hyopneumoniae
           168]
          Length = 238

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 24/214 (11%)

Query: 28  SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I  + +LK E    I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139
              +      I+K D+V  LDL +G+G + LAL K    F    +   DIS +A+  AK 
Sbjct: 66  -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118

Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  N +    + ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L  
Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
             +  S Y  I + +   L +DG    EI YN +
Sbjct: 174 WPNPFSFYEKILEKIDNFLAEDGWIFFEIDYNSQ 207


>gi|220911261|ref|YP_002486570.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
 gi|219858139|gb|ACL38481.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
          Length = 281

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 96/236 (40%), Gaps = 34/236 (14%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------- 82
           L + + R +    +  ILGW +F   R+ +    F PR  TELLV               
Sbjct: 30  LADCVRRRVAGLPLEYILGWAEFDGHRMAVRPGVFVPRRRTELLVRLAAGLMSGEGNLLK 89

Query: 83  -----DSALAFSLP-----RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
                DS  A +       R    D V ++DL  G+GAV  AL +  P  +   VDI   
Sbjct: 90  GVFPADSTFAGAAAVQGSLRSASFDGV-VVDLCCGSGAVGAALARRFPRAELHAVDIDSV 148

Query: 133 ALEIAKSNAVTNG----VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           A+E A+SN    G      + FD L     S V     ++  N PY+ +  +  +  E R
Sbjct: 149 AVECARSNVEAVGGHVHTGDLFDALPCSLRSRVH----ILAVNAPYVPTEAIKTMPPEAR 204

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             +P +SLDGG DGL  +R +A G    L   G   +E    Q      +  +  L
Sbjct: 205 VHEPLLSLDGGTDGLDFHRRVAAGAKDWLAPHGCVLIETSEQQAGGTAALMAATGL 260


>gi|86742400|ref|YP_482800.1| HemK family modification methylase [Frankia sp. CcI3]
 gi|86569262|gb|ABD13071.1| modification methylase, HemK family [Frankia sp. CcI3]
          Length = 338

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 7/224 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVR 100
           + R  +   +  + G   F ++ LT+    F PRPETE +V+ AL   +     +R    
Sbjct: 101 VARRAQRVPLQHLTGVAGFRHLDLTVGPGVFIPRPETESVVEWALTELTGSAGARRPGPL 160

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQS 155
            +DL  G+GA+ L+L  E P      V++   A+   + N    G+              
Sbjct: 161 CVDLCAGSGAIALSLAAELPGATVHAVEVDPAAVVWLRRNIAGTGLPVTAHAADIAAALP 220

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +  + + G  D+I+SNPPY+       +  EV + DP  +L GG DGL   RT+    +R
Sbjct: 221 ESLTRLAGTVDLIISNPPYLPDADRHTVEPEVGEHDPARALWGGPDGLDVVRTVVGVAAR 280

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFES-RKLFLVNAFKDYGGNDR 258
            L   GL  +E      V    +  +  +   V  ++D  G DR
Sbjct: 281 LLRPGGLLVIEHADGHGVSAPELLRADGRWSHVADYRDLAGRDR 324


>gi|255745143|ref|ZP_05419092.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
           101]
 gi|262153467|ref|ZP_06028597.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
           91/1]
 gi|262167477|ref|ZP_06035183.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
 gi|262191367|ref|ZP_06049557.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
           5369-93]
 gi|255736973|gb|EET92369.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
           101]
 gi|262024049|gb|EEY42744.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
 gi|262030704|gb|EEY49338.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
           91/1]
 gi|262032742|gb|EEY51290.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
           5369-93]
 gi|327484646|gb|AEA79053.1| Ribosomal protein L3 methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 310

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 250 LYLKENGILVCEVG 263


>gi|15594542|ref|NP_212331.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31]
 gi|2688095|gb|AAC66591.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31]
          Length = 286

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE L + AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|91784134|ref|YP_559340.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia xenovorans LB400]
 gi|91688088|gb|ABE31288.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 294

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 11/175 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVATRNVTDYKLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DVI+SNPPY+ +  +  L  E R  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMQELPAEYR-HEPDMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I       L  DG+  VEIG N++  V   F    L  ++      G+D V L
Sbjct: 236 RRIIADARNWLTDDGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286


>gi|15642117|ref|NP_231749.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121586816|ref|ZP_01676598.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
 gi|121727216|ref|ZP_01680383.1| adenine-specific methylase, putative [Vibrio cholerae V52]
 gi|147673603|ref|YP_001217639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae O395]
 gi|153213246|ref|ZP_01948658.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
 gi|153803027|ref|ZP_01957613.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
 gi|153818977|ref|ZP_01971644.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
 gi|153822882|ref|ZP_01975549.1| adenine-specific methylase, putative [Vibrio cholerae B33]
 gi|153825591|ref|ZP_01978258.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
 gi|153828601|ref|ZP_01981268.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
 gi|227082243|ref|YP_002810794.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
 gi|229507797|ref|ZP_04397302.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
 gi|229511966|ref|ZP_04401445.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
 gi|229513769|ref|ZP_04403231.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
 gi|229519102|ref|ZP_04408545.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
 gi|229524120|ref|ZP_04413525.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
           VL426]
 gi|229528870|ref|ZP_04418260.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
 gi|229607342|ref|YP_002877990.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MJ-1236]
 gi|254226355|ref|ZP_04919944.1| adenine-specific methylase, putative [Vibrio cholerae V51]
 gi|254291354|ref|ZP_04962147.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
 gi|254849203|ref|ZP_05238553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MO10]
 gi|298497860|ref|ZP_07007667.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
           L3-specific [Vibrio cholerae MAK 757]
 gi|18203198|sp|Q9KQ83|Y2118_VIBCH RecName: Full=Uncharacterized adenine-specific methylase VC_2118
 gi|9656668|gb|AAF95263.1| adenine-specific methylase, putative [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548983|gb|EAX59022.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
 gi|121630461|gb|EAX62854.1| adenine-specific methylase, putative [Vibrio cholerae V52]
 gi|124116046|gb|EAY34866.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
 gi|124121425|gb|EAY40168.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
 gi|125621105|gb|EAZ49450.1| adenine-specific methylase, putative [Vibrio cholerae V51]
 gi|126510472|gb|EAZ73066.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
 gi|126519578|gb|EAZ76801.1| adenine-specific methylase, putative [Vibrio cholerae B33]
 gi|146315486|gb|ABQ20025.1| putative adenine-specific methylase [Vibrio cholerae O395]
 gi|148875872|gb|EDL74007.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
 gi|149740742|gb|EDM54841.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
 gi|150422684|gb|EDN14638.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
 gi|227010131|gb|ACP06343.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
 gi|227014014|gb|ACP10224.1| putative adenine-specific methylase [Vibrio cholerae O395]
 gi|229332644|gb|EEN98130.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
 gi|229337701|gb|EEO02718.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
           VL426]
 gi|229343791|gb|EEO08766.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
 gi|229348950|gb|EEO13907.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
 gi|229351931|gb|EEO16872.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
 gi|229355302|gb|EEO20223.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
 gi|229369997|gb|ACQ60420.1| hypothetical protein VCD_002253 [Vibrio cholerae MJ-1236]
 gi|254844908|gb|EET23322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MO10]
 gi|297542193|gb|EFH78243.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
           L3-specific [Vibrio cholerae MAK 757]
          Length = 314

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++S
Sbjct: 135 EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLEQQVFPIRS 194

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 195 DLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLARRILANAP 253

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 254 LYLKENGILVCEVG 267


>gi|226321515|ref|ZP_03797041.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26]
 gi|226232704|gb|EEH31457.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26]
          Length = 286

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE L + AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|237748727|ref|ZP_04579207.1| modification methylase HemK [Oxalobacter formigenes OXCC13]
 gi|229380089|gb|EEO30180.1| modification methylase HemK [Oxalobacter formigenes OXCC13]
          Length = 302

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 94/189 (49%), Gaps = 13/189 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135
            EL+V+    FS   I+   V  IL+L TG+G  CLA++    F       V++S  AL 
Sbjct: 114 AELIVEQ---FSPWIIDPEGVTDILELCTGSG--CLAIMLADVFENATVDAVELSPAALG 168

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           IA++N     + +R     +D +  + +  + +IV+NPPY+    +D L  E    +P++
Sbjct: 169 IAQTNINNYQLKDRVKLHHADLYDGIPDKQYQLIVTNPPYVNQSSMDDLPPEYM-HEPQM 227

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L GG DG+   R I       L  DGL  VEIG N+  + +  F   +L  ++     G
Sbjct: 228 ALAGGFDGMDIVRRIVRTAGEKLTDDGLLIVEIG-NEAENAIAAFPELELTWLST---SG 283

Query: 255 GNDRVLLFC 263
           G+DRV L  
Sbjct: 284 GDDRVFLLT 292


>gi|195941928|ref|ZP_03087310.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi 80a]
 gi|216264489|ref|ZP_03436481.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a]
 gi|223889246|ref|ZP_03623834.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b]
 gi|226320938|ref|ZP_03796486.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805]
 gi|215980962|gb|EEC21769.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a]
 gi|223885279|gb|EEF56381.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b]
 gi|226233640|gb|EEH32373.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805]
          Length = 286

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE L + AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|149928199|ref|ZP_01916444.1| N5-glutamine methyltransferase [Limnobacter sp. MED105]
 gi|149823090|gb|EDM82330.1| N5-glutamine methyltransferase [Limnobacter sp. MED105]
          Length = 304

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            ILD+ TG+G  CLA+L    F       VD+S +AL IA+ N   + + +R   ++SD 
Sbjct: 140 EILDMCTGSG--CLAILAAYVFENAQVDAVDLSTEALSIARENIQLHDMKQRVHAIESDL 197

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           FS++ G  +D I++NPPY+    +  L  E    +PR++L GG  G+   + I +   +H
Sbjct: 198 FSNLNGKQYDFILTNPPYVNEASMKKLPPEYL-HEPRMALAGGDSGMDLIQDILEQAPKH 256

Query: 217 LNKDGLCSVEIGYNQKV 233
           L   G   VE+G N+K+
Sbjct: 257 LKDGGFLVVELG-NEKL 272


>gi|297565961|ref|YP_003684933.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946]
 gi|296850410|gb|ADH63425.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946]
          Length = 288

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 16/217 (7%)

Query: 54  ILGWRDFY----------NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           ILG+  FY           +RL +      PRPETE LV+  LA  L   E+    R+LD
Sbjct: 71  ILGYSLFYVPGLKEDEGGYLRLEVRPGVLIPRPETERLVE--LALGLLSAERSFTGRLLD 128

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+GA+ LAL +  P  +    +I   A+ +A+ NA   G+      L + + + ++ 
Sbjct: 129 VGTGSGAIALALKRRCPKAEVWATEIDPAAVALARENARRAGLE--VQVLLAPFTAHLKA 186

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           L D+IVSNPPY+          E+   +P+ +L  G +GL   R +     R L   G  
Sbjct: 187 L-DLIVSNPPYLPESYRQEAPPELSYENPQ-ALYSGPEGLDMPRELLRHAWRALKPGGAL 244

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           ++E+  +    +    +      V   +D  G  R L
Sbjct: 245 ALELAESNVHTLAEEAQRAGWEAVQVHRDLAGRPRYL 281


>gi|308235423|ref|ZP_07666160.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis ATCC 14018]
          Length = 306

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I+G   F  + L +    F PRPETE++V   L +      K  +V  
Sbjct: 70  ISRRASREPLQHIIGCATFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPIV-- 127

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------ 155
           LDL  G+GA+ L++  E    +   V+ S KA E  + N   N ++E+++ L        
Sbjct: 128 LDLCAGSGAIGLSVASEVADAQVWAVEKSPKAFEYLQKN--YNKIAEKYNILNRYHAILG 185

Query: 156 -------DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206
                     ++++   DV+++NPPY+ ES  V+   +E RD+DP+++L GG  DGL   
Sbjct: 186 DATNVNLPEKAAIKEKVDVVITNPPYVPESQPVE--QIEARDYDPKMALYGGSQDGLLIP 243

Query: 207 RTIADGVSRHLNKDGLCSVE 226
           + I      +L + G+  +E
Sbjct: 244 QKIVKASFAYLRRGGIMIME 263


>gi|146329306|ref|YP_001209561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dichelobacter nodosus VCS1703A]
 gi|146232776|gb|ABQ13754.1| modification methylase, HemK family [Dichelobacter nodosus
           VCS1703A]
          Length = 300

 Score = 75.9 bits (185), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 6/205 (2%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN-VRLTLSSDTFEPRPETELLVDSALAF 88
           L D++   L +A  R ++       L  R  Y      +      PR     L+D  LA 
Sbjct: 59  LTDKECALLADAFRRRIEERLPVPYLTQRTLYGGYEFYIDERALIPRSPIAELIDRGLA- 117

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P  +  D  RILDL  G+G + +      P  + V  DI  +AL +A  N     + +
Sbjct: 118 --PYWQGDDPERILDLCCGSGCIGILAKYHYPDAEVVLADIDEQALAVAAINLQRAAMED 175

Query: 149 R-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + +QSD F++V G FD I+ NPPY+E+  +  +  E    +PR +L  G DGL   R
Sbjct: 176 DGVEIVQSDIFTAVTGTFDWILCNPPYVEAEEMATIAAEYC-HEPRQALVSGADGLDLTR 234

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQK 232
            I    + +LN +G+  +E+G + +
Sbjct: 235 RILSQAAHYLNDNGVLILEVGMSWQ 259


>gi|91792893|ref|YP_562544.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella denitrificans OS217]
 gi|91714895|gb|ABE54821.1| modification methylase, HemK family [Shewanella denitrificans
           OS217]
          Length = 314

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R++DL TG+G + +A        +   +DIS  ALE+A+ N  + GV +R 
Sbjct: 127 PWLYNKQVNRVMDLCTGSGCIAIACAYLFEDAEVDALDISEDALEVAQINIESLGVMDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FSS+     +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPIQSDVFSSIPKGPQYDLIVSNPPYVDAEDIGDMPDEYH-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           I    + +L +DG+  VE+G N  V ++  F
Sbjct: 246 ILANAADYLTQDGVLVVEVG-NSMVHLMEQF 275


>gi|119715987|ref|YP_922952.1| HemK family modification methylase [Nocardioides sp. JS614]
 gi|119536648|gb|ABL81265.1| modification methylase, HemK family [Nocardioides sp. JS614]
          Length = 292

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 12/227 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPR----- 92
           + R    E +  + G   F +V + +    F PRPETELL    ++  L +S  R     
Sbjct: 60  VARRAAREPLQHLTGSVGFRHVEVAVGPGVFVPRPETELLAGWAIEQCLRWSSSRRVGGA 119

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
              R+ V ++DL TG+GAV  A+  E P      V++  +A   A  N     V  R   
Sbjct: 120 TAGRNPV-VVDLCTGSGAVAKAIADEVPTADVHAVELDEEAHRWAGRNLARTTVDLRLGD 178

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + +  F  + G  D++  NPPYI     + +  E RD DP ++L  G DGL   R +   
Sbjct: 179 MATA-FDDLLGQVDIVTCNPPYIPLDAWESVAPEARDHDPHLALFSGADGLDAIRALERR 237

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
            +  L   G+   E    Q      +F +   ++ V    D  G  R
Sbjct: 238 AAELLRPGGVVGFEHADVQGESAPAVFTATDRWVDVRDHDDLAGRAR 284


>gi|261416347|ref|YP_003250030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261372803|gb|ACX75548.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 326

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 96/233 (41%), Gaps = 43/233 (18%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R    E +  I+G   F    +        PRPETE LVD A + SL  IEK  
Sbjct: 63  LRTMVARRATREPLQHIIGDTSFRGFIIKCDRRALIPRPETESLVDMA-SDSLKGIEKPF 121

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------- 147
           +V I   GTGTGA+ +A  KE    K +  D+S  AL +A++NA  N ++          
Sbjct: 122 IVEI---GTGTGAISIACAKEIAGAKVLATDVSEDALALARTNAEANDLAGNPDAESAAS 178

Query: 148 -------------------------ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178
                                    +  + + +D  ++V G      D +++N PYI   
Sbjct: 179 STGSTASASSASSANEASSLTFAQGDLLNAITADVIANVAGDSSAKIDCLIANLPYIPDS 238

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             D L  EV  +DP ++L GG DGL   R +       L       +EIG  Q
Sbjct: 239 EKDKLQPEVAKYDPALALFGGEDGLDLVRKLLQQTEGKLKPGASILLEIGSEQ 291


>gi|113461496|ref|YP_719565.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus somnus 129PT]
 gi|170718390|ref|YP_001783613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus somnus 2336]
 gi|112823539|gb|ABI25628.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Haemophilus somnus 129PT]
 gi|168826519|gb|ACA31890.1| modification methylase, HemK family [Haemophilus somnus 2336]
          Length = 317

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 83/146 (56%), Gaps = 3/146 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++D +RILDL TG+G + +A  ++    +   VD+S  AL +A+ N   + ++ R   +Q
Sbjct: 141 QQDPIRILDLCTGSGCIAIACAEQFTHAEVDAVDLSIDALNVAEINIERHNLTHRVFPIQ 200

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD F ++    +D+I++NPPY++   +  + +E    +P ++L  GIDGL+  + I    
Sbjct: 201 SDLFKNLPLDQYDLIITNPPYVDEEDLQDMPIEFHH-EPEMALGSGIDGLTITKEILANS 259

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239
           + +L  +G+   E+G N  V ++  F
Sbjct: 260 ADYLTDNGILICEVG-NSMVHLIEQF 284


>gi|241667313|ref|ZP_04754891.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254875865|ref|ZP_05248575.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841886|gb|EET20300.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 314

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 10/207 (4%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +L + ++  +     R+ + + +  IL    F  +   +      PR     L+ +  + 
Sbjct: 69  LLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145
            +  I+  DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + 
Sbjct: 129 WINDID--DVTNVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S+R   ++SD F +++G  +D+IVSNPPY++   ++ +  E   ++P+++L+ G DGL 
Sbjct: 184 LSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNSMPQEYH-YEPKLALEAGNDGLD 242

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             + I     +++ + G+  VE+G +Q
Sbjct: 243 LAKRIILEADQYMTEKGVLIVEVGNSQ 269


>gi|167626734|ref|YP_001677234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|167596735|gb|ABZ86733.1| modification methylase, HemK family [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 314

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 10/207 (4%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +L + ++  +     R+ + + +  IL    F  +   +      PR     L+ +  + 
Sbjct: 69  LLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFSP 128

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNG 145
            +  I+  DV  +LDL TG+G + +A    S  F+      VDIS  AL +A  N   + 
Sbjct: 129 WINDID--DVTNVLDLCTGSGCIGIAC---SNVFEDANITLVDISDDALAVANHNIKKHQ 183

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S+R   ++SD F +++G  +D+IVSNPPY++   ++ +  E   ++P+++L+ G DGL 
Sbjct: 184 LSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNSMPQEYH-YEPKLALEAGDDGLD 242

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             + I     +++ + G+  VE+G +Q
Sbjct: 243 LAKRIILEADQYMTEKGVLIVEVGNSQ 269


>gi|300115419|ref|YP_003761994.1| ribosomal protein L3-specific protein-(glutamine-N5)
           methyltransferase [Nitrosococcus watsonii C-113]
 gi|299541356|gb|ADJ29673.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Nitrosococcus watsonii C-113]
          Length = 303

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +    V  +LDL TG+G + +A     P  +    DIS +AL +A+ N   +G+  + 
Sbjct: 128 PFVTLESVHTLLDLCTGSGCIAIATAHAFPEAQVDATDISEEALAVARMNIERHGLEAQV 187

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               S  F  + G  +D+IVSNPPY+    +  L  E    +PR +L+   +GLS    I
Sbjct: 188 HAFSSSLFQKLGGRRYDLIVSNPPYVGQAELAALAREYHH-EPRQALETEEEGLSIVLQI 246

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 HLN+ G+  VE+G+++     R+ +   L+L
Sbjct: 247 LQQAPEHLNEKGILVVEVGHSEAALTERLPQVPFLWL 283


>gi|268601733|ref|ZP_06135900.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID18]
 gi|268585864|gb|EEZ50540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID18]
          Length = 243

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 2/114 (1%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P IE  ++V   LDL TG+G + + +    P  +   VD+S  ALE+A  N    G+ ER
Sbjct: 127 PWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAVDVSLDALEVAGINIEDYGLEER 186

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              + +D F  +EG +D+IVSNPPY+++  V  L  E    +P ++L  G DGL
Sbjct: 187 IQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPEEYL-HEPELALGSGADGL 239


>gi|311114830|ref|YP_003986051.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis
           ATCC 14019]
 gi|310946324|gb|ADP39028.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis
           ATCC 14019]
          Length = 302

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 21/200 (10%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I+G   F  + L +    F PRPETE++V   L +      K  +V  
Sbjct: 66  ISRRASREPLQHIIGCATFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPIV-- 123

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------ 155
           LDL  G+GA+ L++  E    +   V+ S KA E  + N   N ++E+++ L        
Sbjct: 124 LDLCAGSGAIGLSVASEVADAQVWAVEKSPKAFEYLQKN--YNKIAEKYNILNRYHAILG 181

Query: 156 -------DWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHY 206
                     ++++   DV+++NPPY+ ES  V+   +E RD+DP+++L GG  DGL   
Sbjct: 182 DATNVNLPEKAAIKEKVDVVITNPPYVPESQPVE--QIEARDYDPKMALYGGSQDGLLIP 239

Query: 207 RTIADGVSRHLNKDGLCSVE 226
           + I      +L + G+  +E
Sbjct: 240 QKIVKASFAYLRRGGIMIME 259


>gi|295676837|ref|YP_003605361.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1002]
 gi|295436680|gb|ADG15850.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1002]
          Length = 294

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 11/176 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N +   + 
Sbjct: 119 PYVEDPEQVAAVLELCTGSG--CLAILAAHAFPNADVDAVDLSAPALEVATRNVLDYHLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DVI+SNPPY+ +  +  L  E +  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAKSMQELPAEYK-HEPEMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R I       L +DG+  +EIG N++  V   F    L  ++      G+D V L 
Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NEREHVEAAFGGLDLVWLST---SAGDDNVFLI 287


>gi|85711980|ref|ZP_01043034.1| Modification methylase, HemK family protein [Idiomarina baltica
           OS145]
 gi|85694166|gb|EAQ32110.1| Modification methylase, HemK family protein [Idiomarina baltica
           OS145]
          Length = 308

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+ TG+G + +A     P  +    DIS  AL +A+ N   +G+ E+   +QSD F+
Sbjct: 135 RVLDMCTGSGCIAVACAYAFPEAEIDATDISADALSVAEFNIGEHGLEEQVFPIQSDIFT 194

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            ++G  +D+IV+NPPY+++  +  L  E R  +P + L  G DGLS   T+    + HL 
Sbjct: 195 GLQGQQYDLIVTNPPYVDAEDMSDLPDEFR-HEPELGLAAGDDGLSLVDTMLLEAADHLT 253

Query: 219 KDGLCSVEIG 228
            +GL   E+G
Sbjct: 254 DNGLLFCEVG 263


>gi|119025460|ref|YP_909305.1| methylase protein [Bifidobacterium adolescentis ATCC 15703]
 gi|118765044|dbj|BAF39223.1| possible methylase protein [Bifidobacterium adolescentis ATCC
           15703]
          Length = 306

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +K E +  I G   F  + L +    F PRPETEL+V   + ++      R   ++
Sbjct: 72  LARRVKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKV 129

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----------- 150
           +DL  G+GA+ LA   E P  +   V+ S    E    N   +  ++R+           
Sbjct: 130 VDLCAGSGAIGLAFASEVPGSEVWAVEKSATTAEWTWRN--LDETAKRYPAIAGNYHLDI 187

Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
            D  Q    S ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      
Sbjct: 188 ADATQMPTLSQLDGTIDIVLTNPPYVPLADIPEQS-EVRDYDPDLALYGGSADGTLIPER 246

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I    ++ L   GL  +E    Q   +     +     V    DY G  R L
Sbjct: 247 IIARAAKLLRAGGLMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYL 298


>gi|139439317|ref|ZP_01772759.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC
           25986]
 gi|133775341|gb|EBA39161.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC
           25986]
          Length = 418

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 7/145 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSN----AVTNG-VSERFD 151
             RIL++G GTG + L+L  E          DI  +A+++A  N     +T+G V+    
Sbjct: 239 TARILEVGCGTGCISLSLAWERRGHVACTATDIEPRAIDLATKNRDALGLTSGEVAFSLT 298

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            L S       G FDV+VSNPPYI + ++  L  EV+DF+P ++L+GG DGL  +R + +
Sbjct: 299 NLVSSIPHDEWGTFDVLVSNPPYIPTDVMRSLPHEVKDFEPDLALEGGADGLDIFRRLLN 358

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVV 236
                L   GL + E+ Y   +D  
Sbjct: 359 AAPYMLRAGGLFACEL-YEGALDAA 382



 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC  TGL+   + +  D  LD  Q   +  A+VR  K E +  I G   F  + +  + 
Sbjct: 34  LLCAATGLARIDLYMRMDETLDAAQLETMHAAVVRRAKGEPLQYITGSTQFRMIDVACAP 93

Query: 70  DTFEPRPETELLVDSALAF 88
               PRPETE+LV+  L +
Sbjct: 94  GVLIPRPETEMLVEEVLNY 112


>gi|325578261|ref|ZP_08148396.1| protein-(glutamine-N5) methyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159997|gb|EGC72126.1| protein-(glutamine-N5) methyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 314

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 7/181 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +   T  PR     L+    A  L    K +  RILDL TG+G + +A  +  
Sbjct: 108 FCGLEFYVDERTIIPRSPISALIQDKFAPLL----KSEPKRILDLCTGSGCIAIATAEAF 163

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  +   VD+S  AL +A+ N   + +  R   +QSD F ++ G  +D+IV+NPPY++  
Sbjct: 164 PEAEVDAVDLSVDALNVAEINIARHQLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEE 223

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  +  E   ++P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  
Sbjct: 224 DLADMPEEFH-YEPELALGSGVDGLEITKQILKQAPDYLTPNGMLICEVG-NSMVSLIEQ 281

Query: 239 F 239
           +
Sbjct: 282 Y 282


>gi|154249579|ref|YP_001410404.1| HemK family modification methylase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153515|gb|ABS60747.1| modification methylase, HemK family [Fervidobacterium nodosum
           Rt17-B1]
          Length = 258

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 35/266 (13%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-----------AIVRSLKHESIHRILGWRD 59
           L +  GL   + ++    VL+  + F +++            + + L    +  ILG  +
Sbjct: 9   LYKEKGLPEREALILISKVLERSKEFVISHDELECPEQAIELLEKRLTGYPLQYILGEVE 68

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+  +  +      PR ETE LV+ A+      I K  + ++L++G G+G + + L  E+
Sbjct: 69  FFGRKFYIEEGVLIPRWETEGLVEIAIDL----IRKNGIKKVLEIGVGSGVILITLALET 124

Query: 120 PFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGLFDVIVSNPPYI 175
               GV   G DI+ KA+E+ + N+    VS      + ++ F      F++IVSNPPY+
Sbjct: 125 ----GVECYGTDINPKAIEVTRKNSQMYDVSCELKLGEYAEPFIEKFDEFELIVSNPPYV 180

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  V  L +EV+ ++P  +L  G DGL  Y+   +   R+  +  +  +EIG +Q   +
Sbjct: 181 RADAV--LPIEVQ-YEPPDALFAGKDGLDFYKKFFE---RYNIQGKIVVMEIGEDQGEAL 234

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLL 261
                 RKL      KD  G DR L+
Sbjct: 235 ------RKLTGGEILKDLAGKDRYLV 254


>gi|323526503|ref|YP_004228656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1001]
 gi|323383505|gb|ADX55596.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1001]
          Length = 294

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 11/175 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + +  +DVI+SNPPY+ +  +  L  E R  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAQRRYDVIISNPPYVNAASMQDLPAEYR-HEPEMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I       L +DG+  +EIG N++  V   F    L  ++      G+D V L
Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286


>gi|159039552|ref|YP_001538805.1| HemK family modification methylase [Salinispora arenicola CNS-205]
 gi|157918387|gb|ABV99814.1| modification methylase, HemK family [Salinispora arenicola CNS-205]
          Length = 304

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QR      + R    E +  + G   F  + L +    F PRPETELL      + + + 
Sbjct: 65  QRHRFDALVTRRAAREPLQYLTGSAPFRYLELAVGPGVFVPRPETELLA----GWGVEQA 120

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----- 148
            +     ++DL +G+GA+ LA+ +E P  + V V+ S  AL   + N  +          
Sbjct: 121 RREAAPLVVDLCSGSGAIALAVAQEVPAARVVAVEGSPAALSWLRRNVASRAAGGDRAVE 180

Query: 149 --RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               D    D  + + G  DV++ NPPY+ + IV  +  EV   DP  ++  G+DGL+  
Sbjct: 181 VVAADVTAPDLLAELLGRVDVLLCNPPYVPADIV--VPPEVGRHDPPGAVFAGVDGLAVV 238

Query: 207 RTIADGVSRHLNKDGLCSVE 226
           R++    +  L   G   +E
Sbjct: 239 RSVVPRAAVLLRPGGRFGIE 258


>gi|290962666|ref|YP_003493848.1| methylase [Streptomyces scabiei 87.22]
 gi|260652192|emb|CBG75324.1| putative methylase [Streptomyces scabiei 87.22]
          Length = 258

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 6/191 (3%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LGW +F  +R+T+    F PR  TE LV+ ALA ++P         ++DL  G+GAV  
Sbjct: 54  VLGWAEFAGLRITVEPGVFVPRRRTEFLVERALA-AVPGASV-----VVDLCCGSGAVGA 107

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL       +    DI   A+  A+ N   +        L +     + G  D++ +N P
Sbjct: 108 ALAVRLVGAELHAADIDPVAVRCARRNIAPHDGHAHEGDLFAALPDRLRGRVDILAANVP 167

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  V  L  E RD +P ++LDGG DGL   R +A      L   G   VE    Q  
Sbjct: 168 YVPTGEVPFLPGEARDHEPLVALDGGADGLDVLRRVAAEAPAWLAPGGCLLVETSERQAP 227

Query: 234 DVVRIFESRKL 244
             +  F+   L
Sbjct: 228 LALDAFQRAGL 238


>gi|296225309|ref|XP_002758436.1| PREDICTED: hemK methyltransferase family member 1-like [Callithrix
           jacchus]
          Length = 338

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVR 100
           R L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +       
Sbjct: 103 RRLQRMPVQYILGEWDFQGLSLKMMPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPL 162

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---- 156
           IL++G G+GA+ L+LL + P  + + VD    A+ +   NA    + +R   +  D    
Sbjct: 163 ILEVGCGSGAISLSLLSQLPQSRVIAVDKGETAISLTHENAQRLRLQDRIWIIHLDMTSE 222

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             W     G  D++VSNPPY+    ++ L  E+  ++   +LDGG +G+     I     
Sbjct: 223 GSWTHLPWGPVDLVVSNPPYVFHQDMEQLAPEIHSYEDPAALDGGEEGMDIITHILALAP 282

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
           R L   G   +E+       V    +SR    L LV   +D+ G  R L
Sbjct: 283 RLLKDCGSIFLEVDPRHLELVSSWLQSRPELYLNLVAVRRDFCGRPRFL 331


>gi|271501315|ref|YP_003334340.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Dickeya dadantii Ech586]
 gi|270344870|gb|ACZ77635.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Dickeya dadantii Ech586]
          Length = 310

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++      LP   +     ILDL TG+G + +A  +  P  +   VDIS  A
Sbjct: 113 PRSPIGELINQRFVSLLPTAPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISADA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+      ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRELPAIHYDLIVTNPPYVDEEDMADLPQEYR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL+  R I      +L +DG+   E+G
Sbjct: 228 ELGLAAGSDGLTLVRRIMACAPDYLAEDGVLICEVG 263


>gi|302869594|ref|YP_003838231.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora aurantiaca ATCC 27029]
 gi|302572453|gb|ADL48655.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora aurantiaca ATCC 27029]
          Length = 296

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 13/200 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QR  L   + R +  E +  +LG   F ++ L +    F PRPETELL +    + + R 
Sbjct: 46  QRDRLDALVGRRVTREPLQHLLGSAGFRHLELAVGPGVFVPRPETELLAE----WGIERA 101

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---- 149
            +     ++DL +G+GA+ LA+ +E P  + V V+ S  AL   + NA     +      
Sbjct: 102 REHAAPLVVDLCSGSGAIALAVAQEVPAARVVAVERSPAALAWLRRNAAGRAAAGDRPVE 161

Query: 150 ---FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               D    D  + + G  DV++ NPPY+   +   +  EV   DP  ++ GG DGL   
Sbjct: 162 VVAADVTDPDLLADLAGRVDVLLCNPPYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVI 219

Query: 207 RTIADGVSRHLNKDGLCSVE 226
           R +    +  L   G   +E
Sbjct: 220 RPVVGRAAALLRPGGAIGIE 239


>gi|149375248|ref|ZP_01893020.1| putative DNA methylase [Marinobacter algicola DG893]
 gi|149360612|gb|EDM49064.1| putative DNA methylase [Marinobacter algicola DG893]
          Length = 294

 Score = 75.5 bits (184), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 10/178 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG   F  +   +      PR     L+   L    P +  + V RILDL TG+G + +
Sbjct: 88  LLGEAWFMGLPFHVDERVLVPRSPLGELIQGGLQ---PWLGNKPVGRILDLCTGSGCIGI 144

Query: 114 ALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           A    +  F+   VD   IS  AL++A  N   + V +R  T+++D F  +EG +DVI+S
Sbjct: 145 A---AASVFEDAEVDLADISTDALDVAAVNIDYHEVGDRVSTVRADVFDGLEGRYDVILS 201

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPY+++  +  +  E    +P + L  G DGL     I    + +LN  GL  VE+G
Sbjct: 202 NPPYVDADDIADMPAEY-GHEPELGLAAGRDGLDIAHRILARAADYLNPGGLLIVEVG 258


>gi|312148044|gb|ADQ30703.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi JD1]
          Length = 286

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 20/183 (10%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IH IL  ++F  +  +L+     PR +TE L + AL     +I++    +ILDL  G+G 
Sbjct: 64  IHYILQKKEFMGIEFSLNRHVLIPRFDTECLAEEALI----QIQQNGFKKILDLCCGSGC 119

Query: 111 VCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           + L++     ++   K +  DIS KAL+I + N     + +  + + S+    ++G  D+
Sbjct: 120 IGLSI----AYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDI 175

Query: 168 IVSNPPYIESVIVDCLGLEVRD---FDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLC 223
           I++NPPY+         LE+++    +P  +L G G DGL+  R I +     L+ +GL 
Sbjct: 176 IITNPPYLNKE-----ELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLI 230

Query: 224 SVE 226
            +E
Sbjct: 231 IIE 233


>gi|254252046|ref|ZP_04945364.1| Methylase [Burkholderia dolosa AUO158]
 gi|124894655|gb|EAY68535.1| Methylase [Burkholderia dolosa AUO158]
          Length = 302

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S  AL++A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSADALQVAEINVRDYGLEDRIS 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +  L       +DVI+SNPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPALRTQPGARYDVILSNPPYVNAASMAALPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I       L+ DG+  VEIG N++  V   F    L          G+D V L 
Sbjct: 240 IVRRIVAEAHNWLHDDGVLVVEIG-NEREHVEAAFGGLAL---TWLPTSAGDDAVFLI 293


>gi|194289807|ref|YP_002005714.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223642|emb|CAQ69649.1| putative Adenine-specific methyase [Cupriavidus taiwanensis LMG
           19424]
          Length = 297

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 85/174 (48%), Gaps = 11/174 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           E   +  +L+L TG+G  CL +L     P  K   VDIS  AL +A+ N     + +R  
Sbjct: 125 ESGSIGPVLELCTGSG--CLPILAAHVWPHAKIDAVDISPDALAVARRNVADYKMDDRIR 182

Query: 152 TLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             + D ++ +     +DVI++NPPY+    +  L  E +  +PRI+L GG DG+   R I
Sbjct: 183 LYEGDLYAPLPHGATYDVILTNPPYVNEASMQALPAEYQ-AEPRIALAGGDDGMDVVRRI 241

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             G    LN  G+  VEIG N+  +V   F   ++  +       G+++V L  
Sbjct: 242 IAGAKARLNPGGVLVVEIG-NEHANVEAAFPELEIVWLPV---SAGDEQVFLLT 291


>gi|300704248|ref|YP_003745851.1| adenine-specific methylase [Ralstonia solanacearum CFBP2957]
 gi|299071912|emb|CBJ43241.1| putative adenine-specific methylase [Ralstonia solanacearum
           CFBP2957]
          Length = 300

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 18/233 (7%)

Query: 41  AIVRSLKHESIHRI----LGWRDF-YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           A++R ++  ++ R+    L    F + VR  +      PR     L++S L   +P   +
Sbjct: 74  AVLRVIERRTVDRVPAAYLTHEAFMHGVRFYVDERVIVPRSFIGELLESGLDPWIPH--E 131

Query: 96  RDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                +L+L TG+G  CLA+L   + P      VD+S  AL +A+ N     +++R    
Sbjct: 132 DGPTDVLELCTGSG--CLAILAALQWPNATLDAVDLSPDALVVAQRNVDDFHLNDRIRLH 189

Query: 154 QSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + D ++ +     +DVI++NPPY+    +  L  E R  +PR++L GG DG+   R I  
Sbjct: 190 EGDLYAPLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILA 248

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              RHL   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 249 DAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297


>gi|167972247|ref|ZP_02554524.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|167974272|ref|ZP_02556549.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|167988936|ref|ZP_02570607.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|225551341|ref|ZP_03772287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|184209290|gb|EDU06333.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018695|gb|EDU56735.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998170|gb|EDU67267.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|225379156|gb|EEH01521.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
          Length = 290

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 11/222 (4%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +  + + RILG+  F   R  +  + F  R ETELLVD  +   + +  K  +  ++D+ 
Sbjct: 65  INEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVD--VINKIIKQSKHQIKSVIDVC 122

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162
            G+G + L++           +DIS  A+  +K NA  +   G++    ++Q  +F   +
Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220
             FD+I+ NPPYI+S     L  +V D+DP  +L      DG+S Y  I + +S   NK 
Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFEHKDGISFYLFIINNISLICNKK 239

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
                EIGY+QK  +  + +  +  +   F  DY    R+L+
Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281


>gi|53719781|ref|YP_108767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei K96243]
 gi|53723897|ref|YP_103209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei ATCC 23344]
 gi|121598261|ref|YP_993388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei SAVP1]
 gi|124383464|ref|YP_001029176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei NCTC 10229]
 gi|126448555|ref|YP_001080895.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei NCTC 10247]
 gi|134277102|ref|ZP_01763817.1| methyltransferase, HemK family protein [Burkholderia pseudomallei
           305]
 gi|166999688|ref|ZP_02265523.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei PRL-20]
 gi|167739188|ref|ZP_02411962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 14]
 gi|167816399|ref|ZP_02448079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 91]
 gi|167824779|ref|ZP_02456250.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 9]
 gi|167894891|ref|ZP_02482293.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 7894]
 gi|167903279|ref|ZP_02490484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911520|ref|ZP_02498611.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 112]
 gi|167919529|ref|ZP_02506620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei BCC215]
 gi|226198944|ref|ZP_03794507.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei Pakistan 9]
 gi|238563761|ref|ZP_00438331.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei GB8 horse 4]
 gi|254178103|ref|ZP_04884758.1| hemK family protein [Burkholderia mallei ATCC 10399]
 gi|254189307|ref|ZP_04895818.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197379|ref|ZP_04903801.1| methyltransferase, HemK family [Burkholderia pseudomallei S13]
 gi|254200162|ref|ZP_04906528.1| methyltransferase, HemK family protein [Burkholderia mallei FMH]
 gi|254206500|ref|ZP_04912852.1| methyltransferase, HemK family protein [Burkholderia mallei JHU]
 gi|52210195|emb|CAH36174.1| putative DNA methylase [Burkholderia pseudomallei K96243]
 gi|52427320|gb|AAU47913.1| hemK family protein [Burkholderia mallei ATCC 23344]
 gi|121227071|gb|ABM49589.1| hemK family protein [Burkholderia mallei SAVP1]
 gi|124291484|gb|ABN00753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei NCTC 10229]
 gi|126241425|gb|ABO04518.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei NCTC 10247]
 gi|134250752|gb|EBA50831.1| methyltransferase, HemK family protein [Burkholderia pseudomallei
           305]
 gi|147749758|gb|EDK56832.1| methyltransferase, HemK family protein [Burkholderia mallei FMH]
 gi|147753943|gb|EDK61008.1| methyltransferase, HemK family protein [Burkholderia mallei JHU]
 gi|157936986|gb|EDO92656.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699142|gb|EDP89112.1| hemK family protein [Burkholderia mallei ATCC 10399]
 gi|169654120|gb|EDS86813.1| methyltransferase, HemK family [Burkholderia pseudomallei S13]
 gi|225929044|gb|EEH25068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei Pakistan 9]
 gi|238520025|gb|EEP83489.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei GB8 horse 4]
 gi|243064338|gb|EES46524.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei PRL-20]
          Length = 307

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|270157806|ref|ZP_06186463.1| adenine-specific methylase [Legionella longbeachae D-4968]
 gi|289163925|ref|YP_003454063.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150]
 gi|269989831|gb|EEZ96085.1| adenine-specific methylase [Legionella longbeachae D-4968]
 gi|288857098|emb|CBJ10913.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150]
          Length = 305

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P I+   V RILDL TG+G + +A     P       DIS +AL +A  N    GV ++ 
Sbjct: 126 PWIDADKVHRILDLCTGSGCIAIACCYAFPEALVDATDISSEALAVAAINREQLGVEDQL 185

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             ++SD F+ V  + +D+IV NPPY+    +  L  E R  +P ++L+ G +GL+   +I
Sbjct: 186 TLIESDCFTKVPQVHYDLIVCNPPYVGKEEMQTLPDEFRH-EPVLALETGNNGLTIVESI 244

Query: 210 ADGVSRHLNKDGLCSVEIG 228
                 +L++ GL  VE+G
Sbjct: 245 LQNAHAYLSEHGLLIVEVG 263


>gi|170696504|ref|ZP_02887629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia graminis C4D1M]
 gi|170138607|gb|EDT06810.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia graminis C4D1M]
          Length = 294

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 11/175 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DVI+SNPPY+ +  +  L  E +  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMRELPAEYK-HEPEMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I       L +DG+  +EIG N++  V   F    L  ++      G+D V L
Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERQHVEAAFGGLNLVWLST---SAGDDNVFL 286


>gi|326559238|gb|EGE09669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 46P47B1]
 gi|326559877|gb|EGE10277.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 7169]
 gi|326560774|gb|EGE11141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 103P14B1]
 gi|326563515|gb|EGE13774.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 12P80B1]
 gi|326569637|gb|EGE19689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC1]
 gi|326570118|gb|EGE20163.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC8]
 gi|326570856|gb|EGE20880.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC7]
 gi|326574405|gb|EGE24347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 101P30B1]
 gi|326576001|gb|EGE25924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis CO72]
 gi|326576413|gb|EGE26322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis O35E]
          Length = 370

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+G + +AL K  P       DI   ALE+A +N   + ++ + + L+S+ F+
Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFA 246

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +++IV+NPPY+++ ++  L  E    +P  +L  G DGL     I      +L
Sbjct: 247 KLPAENQYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYL 305

Query: 218 NKDGLCSVEIG 228
            KDGL   E+G
Sbjct: 306 TKDGLLVCEVG 316


>gi|76809485|ref|YP_333989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 1710b]
 gi|167720185|ref|ZP_02403421.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei DM98]
 gi|217421762|ref|ZP_03453266.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei
           576]
 gi|254179306|ref|ZP_04885905.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1655]
 gi|254259890|ref|ZP_04950944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1710a]
 gi|76578938|gb|ABA48413.1| hemK family protein [Burkholderia pseudomallei 1710b]
 gi|184209846|gb|EDU06889.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1655]
 gi|217395504|gb|EEC35522.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei
           576]
 gi|254218579|gb|EET07963.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1710a]
          Length = 307

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALYHGDLYAPLPQFKWIDPARRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|90579978|ref|ZP_01235786.1| putative adenine-specific methylase [Vibrio angustum S14]
 gi|90438863|gb|EAS64046.1| putative adenine-specific methylase [Vibrio angustum S14]
          Length = 310

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 2/135 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            ++  RI+DL TG+G + +A     P  +   VDIS +AL +A+ N   +G+ ++   L+
Sbjct: 130 NQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPEALAVAEQNIADHGLEQQVIPLR 189

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD    V +  +D IVSNPPY++   +D L  E R  +P + L  G DGL   R I    
Sbjct: 190 SDLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR-HEPELGLAAGFDGLDLVRRILANA 248

Query: 214 SRHLNKDGLCSVEIG 228
             +L  DG    E+G
Sbjct: 249 PDYLKDDGFLICEVG 263


>gi|296113394|ref|YP_003627332.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
           catarrhalis RH4]
 gi|295921088|gb|ADG61439.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
           catarrhalis RH4]
          Length = 370

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 72/131 (54%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+G + +AL K  P       DI   ALE+A +N   + ++ + + L+S+ F+
Sbjct: 187 RILDLCTGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFA 246

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +++IV+NPPY+++ ++  L  E    +P  +L  G DGL     I      +L
Sbjct: 247 KLPAENQYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYL 305

Query: 218 NKDGLCSVEIG 228
            KDGL   E+G
Sbjct: 306 TKDGLLVCEVG 316


>gi|225017548|ref|ZP_03706740.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum
           DSM 5476]
 gi|224949698|gb|EEG30907.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum
           DSM 5476]
          Length = 287

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 12/214 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG  +FY +   +      PRP+TE L D A+     +I +R  V + DL  G+G 
Sbjct: 70  LQYLLGSWEFYGLEFEVGEGVLIPRPDTERLCDIAIE----QIGERPAV-VADLCAGSGC 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLF---D 166
           V  A+       +   V++S  AL   + N   N  + +   ++ D  S    GL    D
Sbjct: 125 VAAAVQCACAQAQMFAVELSELALPYLRRNLARN--APQVTVIEGDVLSGDTPGLLPQLD 182

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I+SNPPY+ +  ++ L  EVR  +P ++L G  DGL  YR I       L   GL + E
Sbjct: 183 AILSNPPYLTAEDMEHLQREVR-HEPALALYGEEDGLGFYRGITQLWKHRLRPGGLLAYE 241

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           IG NQ   V +I        +   +D  G  RV+
Sbjct: 242 IGINQHTAVAKILRENGFSRIQYAEDLHGVIRVV 275


>gi|239815694|ref|YP_002944604.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Variovorax paradoxus S110]
 gi|239802271|gb|ACS19338.1| modification methylase, HemK family [Variovorax paradoxus S110]
          Length = 293

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 7/156 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            EL+ D ++ + L         R+LDL TG G++ +      P       D+S +ALE+A
Sbjct: 106 AELIADGSIDYWL----GEHTQRVLDLCTGNGSLAVLAAMTYPDITVDAADLSAEALEVA 161

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   + +  R   ++SD  +S+ G +D+++ NPPY+ S  +  L  E R  +P ++L 
Sbjct: 162 AINVTRHQLDARIRLVESDGLASLPGPYDLVLCNPPYVNSASMAALPAEYR-AEPELALA 220

Query: 198 GGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQK 232
           GG DG+   R + AD  SR ++++ +  +EIG  ++
Sbjct: 221 GGADGMDFVRQLFADAPSR-MSEEAVLVLEIGNERE 255


>gi|163750169|ref|ZP_02157411.1| hemK family protein [Shewanella benthica KT99]
 gi|161330025|gb|EDQ01009.1| hemK family protein [Shewanella benthica KT99]
          Length = 313

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R+LDL TG+  + +A   E    +   +DIS  AL++A+ N  + GV +R 
Sbjct: 127 PWLYHKQVNRVLDLCTGSACIAIACAYEFDEAEVDALDISADALDVAQINIESLGVLDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             ++SD FS++     +D+IVSNPPY+++  +  +  E +  +P I L  G DGL   + 
Sbjct: 187 FPIESDIFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEYQ-HEPAIGLASGRDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + ++  DGL  VE+G N  V ++  F +     V  F++  G D V +  R
Sbjct: 246 ILANAADYMTTDGLLVVEVG-NSMVHLLEQFPNVPFTWVT-FEN--GGDGVFVLTR 297


>gi|313672262|ref|YP_004050373.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939018|gb|ADR18210.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 275

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 16/207 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R+F+     +      PR ETE+LV+ AL   + +       ++LD+ TG+G +    L 
Sbjct: 75  REFFGYEFYVDERVLIPRHETEILVEEALKIDIKK------PKVLDICTGSGVILATYLL 128

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173
           +     G+GVDIS  ALE+A  N     + +R   +  D  S ++ +    FD+I+ NPP
Sbjct: 129 KKGDATGLGVDISLPALEVAMINLRKYNLLDRACLVCLDAVSDLDSVKISEFDIILCNPP 188

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI     + L   V  ++P  +L    DG   Y+ +   + +   +D +   EIG     
Sbjct: 189 YISK--SEKLSNSVL-YEPHNALFAEDDGYYFYKKLLRILYKSCKEDTIIFFEIGDGMSE 245

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVL 260
           ++ +IF  +++  +   +DY G  RVL
Sbjct: 246 ELKKIFSGKEISFI---EDYAGKKRVL 269


>gi|300311474|ref|YP_003775566.1| adenine-specific methylase/methyltransferase [Herbaspirillum
           seropedicae SmR1]
 gi|300074259|gb|ADJ63658.1| adenine-specific methylase/methyltransferase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 296

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 7/173 (4%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I+  + +   LDL TG+G + + L    P  +   VDIS  AL +A+ N     + ER
Sbjct: 120 PWIQDPEAIENALDLCTGSGCLPILLADAFPNAQIDAVDISADALAVARKNVDEYQLQER 179

Query: 150 FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + ++SD ++ +    +D+I+SNPPY+ S  +  L  E    +P+++L GG DG+   R 
Sbjct: 180 INLVESDLYTQLPLRKYDLIISNPPYVNSGSMAKLPQEYLR-EPQLALAGGEDGMDLVRK 238

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           I  G +  L  +G+  VEIG N++      F   +L  +       G+D V L
Sbjct: 239 IVAGAAERLTPEGVLVVEIG-NERAFAEAAFPELELTWLTT---SAGDDMVFL 287


>gi|332307145|ref|YP_004434996.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174474|gb|AEE23728.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 309

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 85/161 (52%), Gaps = 10/161 (6%)

Query: 74  PR-PETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           PR P  EL+ D   A+ ++P         ILDL TG G + +AL           VDIS 
Sbjct: 118 PRSPFAELIEDKFAAWVTVPP------THILDLCTGGGCIAIALAYAFEDATVDAVDIST 171

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +ALE+A+ N   + +SER   +QSD   +++G  +D+I+SNPPY+++  +  L  E    
Sbjct: 172 EALEVAEMNINEHQLSERVYPIQSDLLDALQGQKYDLIISNPPYVDAEDMADLPDEFH-H 230

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           +P ++L  G DGL     +    + HL  +G   VE+G +Q
Sbjct: 231 EPELALAAGDDGLDLVHKMLRQAAAHLTDEGWLFVEVGNSQ 271


>gi|17546107|ref|NP_519509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia solanacearum GMI1000]
 gi|17428403|emb|CAD15090.1| probable methylase/methyltransferase protein [Ralstonia
           solanacearum GMI1000]
          Length = 304

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-- 117
            + +R  +      PR     L++  LA  LP   +     +L+L TG+G  CLA+L   
Sbjct: 102 MHGMRFYVDERVIVPRSFIGELLEEGLAPWLPH--EDGPTDVLELCTGSG--CLAILAAL 157

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           + P      VD+S  AL +A+ N    G++      + D ++ +     +DVI++NPPY+
Sbjct: 158 QWPNATLDAVDLSPDALVVAQRNVDDYGLNGCIRLHEGDLYAPLPPGVHYDVILTNPPYV 217

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V
Sbjct: 218 NETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENV 275

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              F    L          G+D+V L  R
Sbjct: 276 EAAFPDLDLVW---LPTSAGDDQVFLVTR 301


>gi|156555049|ref|XP_001603796.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Nasonia vitripennis]
          Length = 343

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 28/252 (11%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LDD Q   L     R L    +       DF + +L LS+  F P  +TE+LVD  L   
Sbjct: 93  LDDMQLEKLKLLCNRRLSKMPLEYCTEESDFRDTKLKLSAPIFIPERQTEILVDLLLKHV 152

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                K  +  +L++G G GA+ L+LL+ S     V +D +  A ++   NA   G+ + 
Sbjct: 153 DRSCSK--ICHVLEIGCGAGAISLSLLR-SCKCNIVAIDTNMIACQLTLHNAKNLGLEDC 209

Query: 150 FD----TLQSDW-------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
                 TL+S+              F   E  FD IVSNPP + +  +     E  D+  
Sbjct: 210 LTILHATLESNGEIVCTSNLSNDRVFDLQEETFDFIVSNPPCVPTSELPKWQKEYEDYQA 269

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV----N 248
           R   +GG DGL   R +    S+ L KDG+  +E+   Q+ + +R    ++  L+    +
Sbjct: 270 R---NGGKDGLRVIRPLLMYASKRLKKDGILLMEV-LPQQTEQIRSLTEKQYPLILKFDH 325

Query: 249 AFKDYGGNDRVL 260
            +KD   ++RV+
Sbjct: 326 VYKDLSNDERVV 337


>gi|323356869|ref|YP_004223265.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
 gi|323273240|dbj|BAJ73385.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
          Length = 297

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 19/184 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  + G   F ++ L +    F PRPETE++  + LA              +D
Sbjct: 77  RRCAREPLQHLTGVAPFRSLELAVGPGVFVPRPETEMV--AQLAIDALGAAAAPAPIAVD 134

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSS 160
           LGTG+GA+ LA+  E P  +    + S  A    K N    G   V+  F  L +D F  
Sbjct: 135 LGTGSGAIALAMATEVPHARVFAAENSVDAFIWTKENVARVGATNVTLAFVDL-ADAFPE 193

Query: 161 VEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++G   V+ SNPPY+  +++  D    EVR +DP  +L GG DGL       D V RHL+
Sbjct: 194 LDGTVSVVASNPPYVPDDAIPRDP---EVRLYDPPAALYGGPDGL-------DAV-RHLS 242

Query: 219 KDGL 222
           + GL
Sbjct: 243 RVGL 246


>gi|167581464|ref|ZP_02374338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis TXDOH]
          Length = 307

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDDYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALHHGDLYAPLPQFKWIDSAQRYDVIITNPPYVNAESMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L  +       G+D V
Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLELVWL---PTSAGDDSV 294

Query: 260 LLF 262
            L 
Sbjct: 295 FLI 297


>gi|144227482|gb|AAZ44227.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae J]
 gi|144575293|gb|AAZ53514.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448]
          Length = 238

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%)

Query: 28  SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I  + +LK E    I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139
              +      I+K D+V  LDL +G+G + LAL K    F    +   DIS +A+  AK 
Sbjct: 66  -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118

Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  N +    + ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L  
Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
             +  S Y  I + +   L  DG    EI YN +
Sbjct: 174 WPEPFSFYEKILEKIDNFLADDGWIFFEIDYNSQ 207


>gi|116329264|ref|YP_798984.1| methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116122008|gb|ABJ80051.1| Methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 286

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   ++ V+ + +L + ++      IV   K++    I G + FYN   
Sbjct: 29  DAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYNSVF 88

Query: 66  TLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            ++     PRPETE LV+  L  F     E+     +LDL TG+G + ++L      +  
Sbjct: 89  FVNEKVLIPRPETEELVEKILLDFKGNNSEQ----NVLDLCTGSGCIGISLKSARKDWNI 144

Query: 125 VGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
              DIS  ALEIAK NA+   G       L+S+ F S+  E  FD+IV+NPPYI      
Sbjct: 145 TLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISDKT 204

Query: 182 CLGLEVRDFDPRISL 196
            +  +V D++P ++L
Sbjct: 205 EMMKDVVDYEPHLAL 219


>gi|54020409|ref|YP_115755.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 232]
 gi|53987582|gb|AAV27783.1| protoporphyrinogen oxidase homolog [Mycoplasma hyopneumoniae 232]
          Length = 238

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%)

Query: 28  SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I  + +LK E    I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139
              +      I+K D+V  LDL +G+G + LAL K    F    +   DIS +A+  AK 
Sbjct: 66  -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 118

Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  N +    + ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L  
Sbjct: 119 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 173

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
             +  S Y  I + +   L  DG    EI YN +
Sbjct: 174 WPEPFSFYEKILEKIGNFLADDGWIFFEIDYNSQ 207


>gi|89073464|ref|ZP_01159987.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
 gi|89050728|gb|EAR56209.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
          Length = 310

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  RI+DL TG+G + +A     P  +   VDIS +AL +A+ N   +G+ ++   L+S
Sbjct: 131 QEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPEALAVAEQNIADHGLEQQVIPLRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D    V +  +D IVSNPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR-HEPELGLAAGFDGLDLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG    E+G
Sbjct: 250 DYLKDDGFLICEVG 263


>gi|83721211|ref|YP_442537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis E264]
 gi|167619573|ref|ZP_02388204.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis Bt4]
 gi|257138746|ref|ZP_05587008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis E264]
 gi|83655036|gb|ABC39099.1| hemK family protein [Burkholderia thailandensis E264]
          Length = 307

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDDYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           ER      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 ERIALHHGDLYAPLPQFKWIDSAQRYDVIITNPPYVNAESMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L  +       G+D V
Sbjct: 239 ADGMDIVRRIIGEARRWLKDDGVLVVEIG-NERANVEAAFGGLELVWL---PTSAGDDSV 294

Query: 260 LLF 262
            L 
Sbjct: 295 FLI 297


>gi|304407780|ref|ZP_07389431.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus curdlanolyticus YK9]
 gi|304343263|gb|EFM09106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus curdlanolyticus YK9]
          Length = 377

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            DV+VSNPPYI +  +  L  EVRD++PR++LDGG+DGL  YR +A+ + R      + +
Sbjct: 270 IDVLVSNPPYIPAGDLPDLQTEVRDYEPRLALDGGMDGLDPYRRMAEQLLRLAELPRIVA 329

Query: 225 VEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
            E+G  Q  DV  +  S   +  +    DYGG DR
Sbjct: 330 FELGMGQAEDVAELLRSIGYWDHIRIITDYGGIDR 364



 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 11/158 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            +  V G    +++ D    + +         + R    E +  +LG + FY     +++
Sbjct: 46  LIGHVLGFGKAELLRDWREPMPEEAFARWAKLVARKAAGEPVQYLLGEQWFYGRPFAVTA 105

Query: 70  DTFEPRPETELLVDSALAFS---LPRIEKRDV--------VRILDLGTGTGAVCLALLKE 118
               PRPETELLV++ LA +    PR E            + +LD+GTG+GA+ + L  E
Sbjct: 106 AVLIPRPETELLVEAVLAEADALWPRGEAAAAGQEARVRELTVLDVGTGSGAIAVTLAAE 165

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++    D+S  AL++A  NA  +  + R   ++ D
Sbjct: 166 RSDWRVYASDLSPDALQVALGNAWRHAGAGRIAFVEGD 203


>gi|190150270|ref|YP_001968795.1| adenine-specific methylase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307263609|ref|ZP_07545223.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915401|gb|ACE61653.1| hypothetical adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871072|gb|EFN02802.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 314

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  F S
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283


>gi|32266847|ref|NP_860879.1| DNA methylase HemK [Helicobacter hepaticus ATCC 51449]
 gi|32262899|gb|AAP77945.1| possible DNA methylase HemK [Helicobacter hepaticus ATCC 51449]
          Length = 279

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 13/225 (5%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QRF+    I    K + I  I     FY     +      PRPETE+L+D A       I
Sbjct: 60  QRFY--TLINERAKGKPIEYITRQASFYERSFYVDERVLIPRPETEILIDKANEI----I 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +   V  I ++G G+G +   L    P       DIS +ALE++K N  T   +    TL
Sbjct: 114 KGEKVNFIAEVGVGSGIITTTLAIMHPQCYFFATDISEQALEVSKLNIATYAPNANI-TL 172

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q            +I+SNPPYI+        L    ++P+I+L GG DGL   +++ +  
Sbjct: 173 QCCSLLPAHINPQLIISNPPYIKDDYPISAPLH---YEPKIALFGGKDGLGILKSLINEC 229

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +    +      EIGY+QK  +  I    +   +  +KD  G DR
Sbjct: 230 A---TRKVWLLCEIGYDQKDALEHILLQSRAKNITFYKDLSGWDR 271


>gi|297197619|ref|ZP_06915016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
 gi|297146802|gb|EFH28353.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
          Length = 263

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 6/202 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +    +  ++GW +F  +R+T+S   F PR  TE LVD ALA +        
Sbjct: 43  LADMVDRRVVGHPLELVVGWAEFRGLRVTVSPGVFVPRRRTEFLVDQALALA------PG 96

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GAV  AL       +    DI   A++ A+ N    G       L    
Sbjct: 97  ASVVVDLCCGSGAVGAALAAALGPVELHSADIDPAAVDCARRNTADAGGQVHTGDLFEAL 156

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            + + G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A    + L
Sbjct: 157 PAGLRGRVDILAANVPYVPTEEVALLPTEARDHEPLVALDGGTDGLDVLRRVAAEAPQWL 216

Query: 218 NKDGLCSVEIGYNQKVDVVRIF 239
              G   VE    Q    V  F
Sbjct: 217 APGGRLLVETSERQAPAAVDAF 238


>gi|241765979|ref|ZP_04763903.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
 gi|241364048|gb|EER59288.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
          Length = 309

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 5/165 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P  +  G DIS  ALE+A+ N   +G+  R     SD  +
Sbjct: 141 RVLDLCTGNGSLAVLAAMAWPEVEVTGADISPDALEVARINVDRHGLQARITLQLSDGLA 200

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G +D+I+ NPPY+ +  +  L  E    +P ++L GG DG+   R +       +++
Sbjct: 201 QLPGPWDLIICNPPYVNADSMSRLPAEYL-AEPALALAGGTDGMDFVRRLLQDAPSRMSE 259

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +  +EIG N++      F    ++ V+      G+D+VL+  R
Sbjct: 260 NAVLVLEIG-NERPYFEAAFGQLPVYWVDT---SAGDDQVLVVTR 300


>gi|50085164|ref|YP_046674.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ADP1]
 gi|49531140|emb|CAG68852.1| putative adenine-specific methylase [Acinetobacter sp. ADP1]
          Length = 336

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +AL    P  +    DIS  ALE+A  N   +    +   L+SD F+
Sbjct: 159 RILDMCTGSGCIAVALAYAYPDAEVDATDISKDALEVAALNVEHHNKQYQIALLESDLFT 218

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L
Sbjct: 219 KIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYL 277

Query: 218 NKDGLCSVEIG 228
           +++GL  +E+G
Sbjct: 278 SENGLIVIEVG 288


>gi|307261431|ref|ZP_07543104.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868888|gb|EFN00692.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 314

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  F S
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283


>gi|307131869|ref|YP_003883885.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya
           dadantii 3937]
 gi|306529398|gb|ADM99328.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya
           dadantii 3937]
          Length = 310

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++  A  LP   +     ILDL TG+G + +A  +  P  +   VDIS +A
Sbjct: 113 PRSPIGELINNRFASLLPNAPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISAEA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+      ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I       L ++G+   E+G
Sbjct: 228 ELGLAAGSDGLKLVRRILACAPDFLTEEGVLICEVG 263


>gi|315633950|ref|ZP_07889239.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis
           ATCC 33393]
 gi|315477200|gb|EFU67943.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis
           ATCC 33393]
          Length = 316

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 11/190 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           IHR   W  F  +   +      PR     L++   A  L     R+  RILD+ TG+G 
Sbjct: 104 IHR--AW--FCGLEFYVDERVIVPRSPISALIEQGFAGLL----TREPQRILDMCTGSGC 155

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIV 169
           + +A  +  P      VD+S  AL +A+ N   + ++ R   +QSD FS  +E  +D+IV
Sbjct: 156 IAIACAERFPEADVDAVDLSFDALNVAEINIERHNLTHRVFPIQSDLFSRLLEEQYDLIV 215

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +NPPY++   +  +  E   ++P ++L  G DGL+  + I      +L  DG+   E+G 
Sbjct: 216 TNPPYVDLEDLSDMPEEFH-YEPEMALGSGNDGLTITKEILRLAPNYLADDGVLVCEVG- 273

Query: 230 NQKVDVVRIF 239
           N  V ++  F
Sbjct: 274 NSMVHLIEQF 283


>gi|187924448|ref|YP_001896090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia phytofirmans PsJN]
 gi|187715642|gb|ACD16866.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia phytofirmans PsJN]
          Length = 294

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 11/176 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DVI+SNPPY+ +  +  L  E +  +P ++L GG+DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVIISNPPYVNAASMQDLPAEYK-HEPNMALAGGVDGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R I       L  +G+  VEIG N++  V   F    L  ++      G+D V L 
Sbjct: 236 RRIIADARNWLTDEGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFLI 287


>gi|251788964|ref|YP_003003685.1| modification methylase, HemK family [Dickeya zeae Ech1591]
 gi|247537585|gb|ACT06206.1| modification methylase, HemK family [Dickeya zeae Ech1591]
          Length = 310

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++   A  LP   +     ILDL TG+G + +A  +  P  +   VDIS  A
Sbjct: 113 PRSPIGELINQQFASILPHPPRH----ILDLCTGSGCIAIACAQAFPEAEVDAVDISADA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+      ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHGMEYNVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L ++G+   E+G
Sbjct: 228 ELGLAAGSDGLKLVRRILACAPDYLAEEGVLICEVG 263


>gi|289643791|ref|ZP_06475899.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
 gi|289506397|gb|EFD27388.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
          Length = 281

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 7/203 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-------LPRIEKRDVVRIL 102
            +  ILGW  F  +R+ +    F PR  TE LV  A+A +       + +   R    ++
Sbjct: 58  PLEHILGWAWFCGLRIAVDPGVFVPRRRTEFLVQQAVALAQRLAAGRVGQPPNRPAAVVV 117

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DL  G+GAV +ALL      +    D+   A+  A+ N    G       L      ++ 
Sbjct: 118 DLCCGSGAVGVALLMALDAVELYATDLDPAAVRCARRNLAGAGGQVYEGDLYEPLPVTLR 177

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++ +N PY+ +  +  L  E R  + R++LDGG DGL   R +     + L   G 
Sbjct: 178 GRVDILAANAPYVPTEEMGLLPPEARVHERRMALDGGTDGLDVLRRVTAEAPQWLAPGGR 237

Query: 223 CSVEIGYNQKVDVVRIFESRKLF 245
             VE    Q    V       L 
Sbjct: 238 LLVETSGRQAARTVETVARNGLL 260


>gi|330829720|ref|YP_004392672.1| adenine-specific methylase YfcB [Aeromonas veronii B565]
 gi|328804856|gb|AEB50055.1| adenine-specific methylase YfcB [Aeromonas veronii B565]
          Length = 315

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 15/176 (8%)

Query: 56  GWRDFYNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           GW  + + R+ +      PR P  E++ +    F      K +  RI+DL TG+G + + 
Sbjct: 105 GWEFYVDERVLI------PRSPIAEMVANRFAPFL-----KHEPTRIMDLCTGSGCIAII 153

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172
           +  E P  +   +DIS  AL +A+ N   +G+ ++   ++SD F  +     +D+IVSNP
Sbjct: 154 MAHEFPEAEVDAIDISVDALNVAERNINDHGLEQQVIPIRSDLFRDLPAGDKYDLIVSNP 213

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY++S  +  L  E R  +P ++L  G DGL   + +    +  L  +G+  VE+G
Sbjct: 214 PYVDSEDMSDLPDEFR-HEPELALASGSDGLKLTKRLLAHAADFLKDNGVLVVEVG 268


>gi|165976362|ref|YP_001651955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|303251386|ref|ZP_07337563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307252569|ref|ZP_07534464.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|165876463|gb|ABY69511.1| putative adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302649740|gb|EFL79919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306859974|gb|EFM91992.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 314

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  F S
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283


>gi|90414824|ref|ZP_01222791.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
 gi|90324067|gb|EAS40654.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
          Length = 310

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +++  RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ ++   L+
Sbjct: 130 QQEPTRIMDLCTGSGCIGIACAHAFPDAEVDLVDISIDALAVAEQNINDHGLEQQVIPLR 189

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD    V +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I    
Sbjct: 190 SDLLRDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVRRILANA 248

Query: 214 SRHLNKDGLCSVEIG 228
             +L  DG+   E+G
Sbjct: 249 PDYLKDDGILICEVG 263


>gi|305433239|ref|ZP_07402395.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20]
 gi|304443940|gb|EFM36597.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20]
          Length = 266

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 19/253 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D   D +  F L   I R    E    I    DF+ +   +   
Sbjct: 25  LCEYLKKDRTWIFLNQDLEFDSKPYFEL---IKRFQSGEPFEYIFEKADFWGLEFKVKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ++E+L+   L       +  +   IL++G G+G + + L KE    K    DI+
Sbjct: 82  VLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKELGI-KITACDIN 136

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRD 189
            KAL++A  NA  + V    D    D F  ++  +D I SNPPYI+ S  +D   L V++
Sbjct: 137 PKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYPID---LWVQN 192

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +P+ +L GG  G   Y  + + ++     K    + E GY+QKV + +I   +K F   
Sbjct: 193 -EPKEALFGGEKG---YEILEEIITFSFERKVKFLACEFGYDQKVILKQIL-YQKNFQAE 247

Query: 249 AFKDYGGNDRVLL 261
            F+D  G DR  +
Sbjct: 248 FFQDEQGYDRAFV 260


>gi|152968275|ref|YP_001364059.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
 gi|151362792|gb|ABS05795.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
          Length = 272

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 16/198 (8%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +  E +  +LGW +F   R  ++   F PR  +  LVD   A    R    D
Sbjct: 46  LADLLARRVAGERLEDVLGWAEFAGRRYAVAPGVFVPRHRSAFLVDLVAA----RARAGD 101

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VV  LDLG GTGA+  A+ +  P       D+   A+  A+ N     V E       D 
Sbjct: 102 VV--LDLGCGTGALVGAVRERVPGLVVHAADVDPAAVACARRNLPGAAVHE------GDL 153

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F+++     G  DV+++N PY+ +  +  L  E+R+ + R +LDGG DGL   R +  G 
Sbjct: 154 FAALPPTLRGRLDVVIANVPYVPTAQIAHLPAEMREHEDRRTLDGGGDGLDVLRRVLGGA 213

Query: 214 SRHLNKDGLCSVEIGYNQ 231
              L+  G   VE+  +Q
Sbjct: 214 GDWLSARGRVFVELDEDQ 231


>gi|113868049|ref|YP_726538.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia eutropha H16]
 gi|113526825|emb|CAJ93170.1| predicted methyltransferase [Ralstonia eutropha H16]
          Length = 297

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 7/172 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E   +  +L+L TG+G + +      P  K   VDIS  AL +A+ N     + +R    
Sbjct: 125 ETDSIGPVLELCTGSGCLPIVAAHVWPNAKIDAVDISPDALAVARRNVADYKMDDRIRLY 184

Query: 154 QSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + D ++ +     +DVI++NPPY+    +  L  E    +PRI+L GG DG+   R I  
Sbjct: 185 EGDLYAPLPHGATYDVILTNPPYVNEGSMQALPPEYL-AEPRIALAGGDDGMDVVRRIIA 243

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           G   HLN  G+  VEIG N+  +V   F   ++  +       G+++V L  
Sbjct: 244 GAKAHLNPGGVLVVEIG-NEHANVEAAFPELEIVWLPV---SAGDEQVFLLT 291


>gi|71893492|ref|YP_278938.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae J]
 gi|72080479|ref|YP_287537.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448]
          Length = 236

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%), Gaps = 24/214 (11%)

Query: 28  SVLDDRQRFFLTNAI--VRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I  + +LK E    I +I+G+ +   V++ L    F PR ET+   
Sbjct: 7   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQ--- 63

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKS 139
              +      I+K D+V  LDL +G+G + LAL K    F    +   DIS +A+  AK 
Sbjct: 64  -ELILKIKKVIKKGDLV--LDLCSGSGFIGLALAK----FINAKITLADISDEAILQAKL 116

Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  N +    + ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L  
Sbjct: 117 NAKYNNL--ELNIIKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFA 171

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
             +  S Y  I + +   L  DG    EI YN +
Sbjct: 172 WPEPFSFYEKILEKIDNFLADDGWIFFEIDYNSQ 205


>gi|319793475|ref|YP_004155115.1| protein-(glutamine-n5) methyltransferase, ribosomal protein
           l3-specific [Variovorax paradoxus EPS]
 gi|315595938|gb|ADU37004.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Variovorax paradoxus EPS]
          Length = 292

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 96/189 (50%), Gaps = 13/189 (6%)

Query: 78  TELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            EL+ D ++ + L P  +     R+LDL TG G++ +      P       D+S +ALE+
Sbjct: 106 AELIADGSIDYWLGPHTQ-----RVLDLCTGNGSLAVLAALTYPDVTVDAADLSVEALEV 160

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N   + +  R   ++SD  +++ G +D+++ NPPY+ S  +  L  E R  +P +SL
Sbjct: 161 AAINVTRHELDARVKLVESDGLANLPGPYDLVLCNPPYVNSASMATLPAEYR-AEPELSL 219

Query: 197 DGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            GG DG+   R + AD  SR +++  +  +EIG N++      F   ++      +   G
Sbjct: 220 AGGTDGMDFIRKLFADAPSR-MSEQAVLVLEIG-NERDYFDAAFPQLEVVW---LETSAG 274

Query: 256 NDRVLLFCR 264
            D+VLL  R
Sbjct: 275 EDQVLLVTR 283


>gi|45656171|ref|YP_000257.1| protoporphyrinogen oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599405|gb|AAS68894.1| protoporphyrinogen oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 286

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 6/194 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   ++ V+ + +L++ ++      I+   K++    I   + FYN   
Sbjct: 29  DAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYNSIF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +   PRPETE LV+  L+     I +++V   LDL TG+G + ++L      +   
Sbjct: 89  FVNENVLIPRPETEELVEKVLSDFKGNIGEQNV---LDLCTGSGCIGISLKLARKDWNIT 145

Query: 126 GVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
             DIS +ALE+A  NA+   G  +    L+SD F S+  E  F++IV+NPPYI       
Sbjct: 146 LSDISKEALEVAAKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISDKAE 205

Query: 183 LGLEVRDFDPRISL 196
           +  +V D++P ++L
Sbjct: 206 MMKDVIDYEPHLAL 219


>gi|115352116|ref|YP_773955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ambifaria AMMD]
 gi|115282104|gb|ABI87621.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 302

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N     + +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSDKALEVARINVSDYSLDDRIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAEPDARYDVILTNPPYVNATSMAALPPEYR-HEPEMALAGGEDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I     + L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIISEAHKWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDTVFLI 293


>gi|24213008|ref|NP_710489.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193693|gb|AAN47507.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 286

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 6/194 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  +  L   ++ V+ + +L++ ++      I+   K++    I   + FYN   
Sbjct: 29  DAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYNSIF 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +   PRPETE LV+  L+     I +++V   LDL TG+G + ++L      +   
Sbjct: 89  FVNENVLIPRPETEELVEKVLSDFKGNIGEQNV---LDLCTGSGCIGISLKLARKDWNIT 145

Query: 126 GVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
             DIS +ALE+A  NA+   G  +    L+SD F S+  E  F++IV+NPPYI       
Sbjct: 146 LSDISKEALEVATKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISDKAE 205

Query: 183 LGLEVRDFDPRISL 196
           +  +V D++P ++L
Sbjct: 206 MMKDVIDYEPHLAL 219


>gi|212716436|ref|ZP_03324564.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660689|gb|EEB21264.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM
           16992]
          Length = 326

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 20/247 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           ++V    +RF   + + R  K E +  I G   F  + L +    F PRPETEL+V   +
Sbjct: 79  NTVAAAMERFH--SMVDRRAKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGI 136

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ++      R   +++DL  G+GA+ LA   E P  +   V+ S +  +  + N   +  
Sbjct: 137 EWTTRHGMYR--AKVVDLCAGSGAIGLAFATEVPGSEVWAVEKSERTAQWTRRN--LDET 192

Query: 147 SERF------------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++R+            D  Q    + ++G  D++++NPPY+    +  +  EVRD+DP +
Sbjct: 193 TKRYPAIAGNYHLEIADATQMPTLNQLDGTIDIVLTNPPYVPLSDI-PVQPEVRDYDPDL 251

Query: 195 SLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +L GG  DG      I    S+ L   GL  +E    Q   +     +     V    DY
Sbjct: 252 ALYGGSADGTLIPERIISRASKLLKPGGLMVMEHDVTQGERLAAFARTCDFVDVVVHNDY 311

Query: 254 GGNDRVL 260
            G  R L
Sbjct: 312 TGRPRYL 318


>gi|307729318|ref|YP_003906542.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1003]
 gi|307583853|gb|ADN57251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1003]
          Length = 294

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 11/175 (6%)

Query: 91  PRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  + V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSGVLELCTGSG--CLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLE 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + +  +DVI+SNPPY+ +  +  L  E +  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAQRRYDVIISNPPYVNAASMQELPAEYK-HEPEMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I       L +DG+  +EIG N++  V   F    L  ++      G+D V L
Sbjct: 236 RRIIADARNWLTEDGVLVIEIG-NERHHVEAAFGGLNLVWLST---SAGDDNVFL 286


>gi|186476110|ref|YP_001857580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia phymatum STM815]
 gi|184192569|gb|ACC70534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia phymatum STM815]
          Length = 295

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 11/176 (6%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  + V  +L+L TG+G  CLA+L    F       VD+S  ALE+A  N     + 
Sbjct: 119 PYVEDPEQVGAVLELCTGSG--CLAILAAYAFPNADIDAVDLSPAALEVATRNVQEYELE 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ER    + D ++ + E  +DVI++NPPY+ +  +  L  E +  +P ++L GG DG+   
Sbjct: 177 ERIALFEGDLYAPLPERRYDVIITNPPYVNAESMKALPPEYQ-HEPAMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R I       L  DG+  VEIG N++  V   F    L  ++      G+D V L 
Sbjct: 236 RRIIANARNWLTDDGVLVVEIG-NERAHVEAAFGGLDLVWMST---SAGDDNVFLI 287


>gi|15602255|ref|NP_245327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pasteurella multocida subsp. multocida str. Pm70]
 gi|18202826|sp|Q9CNN7|Y390_PASMU RecName: Full=Uncharacterized adenine-specific methylase PM0390
 gi|12720638|gb|AAK02474.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 338

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 7/167 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+    A  LP+  KR    ILD+ TG+G + +A  +  P  +   VD+S  A
Sbjct: 145 PRSPISALIQEGFAPLLPQEPKR----ILDMCTGSGCIAIACAERFPEAEVDAVDLSSDA 200

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L++A+ N   + + +R   +QSD F  + +  +D+IV+NPPY++   +  +  E    +P
Sbjct: 201 LDVAQINIERHNMLDRVYPIQSDLFHDLAKDQYDLIVANPPYVDLEDLSDMPAEFH-HEP 259

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            ++L  G+DGL   + I      +L + G+   E+G N  V ++  +
Sbjct: 260 EMALGSGVDGLEITKKILYAAPDYLTEQGVLVCEVG-NSMVHLIEQY 305


>gi|302535838|ref|ZP_07288180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
 gi|302444733|gb|EFL16549.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
          Length = 261

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 11/198 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +  E +  ++GW +F  +R+ + +  F PR  TE L   A+  + P      
Sbjct: 36  LAGMVARRVDGEPLEHVVGWAEFCGLRVEVGAGAFVPRRRTEFLAREAVELARPG----- 90

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              +LDL  G GA+  A+  + P   GV     DI   AL  A+ N    G +     L 
Sbjct: 91  -AVVLDLCCGVGALGAAVAAQVP--GGVELHAADIDPAALAYARRNVAPYGGAVWEGDLY 147

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +   + + G  DV++ N PY+ +  +  +  E RD +P +SLDGG DGL  +R +A G  
Sbjct: 148 AALPAGLRGRVDVLMVNAPYVPTGEIGLMPPEARDHEPLVSLDGGADGLDVHRRVAAGAL 207

Query: 215 RHLNKDGLCSVEIGYNQK 232
             L   G   +E    Q 
Sbjct: 208 EWLAPGGHLLMETSARQA 225


>gi|207743262|ref|YP_002259654.1| methylase/methyltransferase protein [Ralstonia solanacearum
           IPO1609]
 gi|206594659|emb|CAQ61586.1| methylase/methyltransferase protein [Ralstonia solanacearum
           IPO1609]
          Length = 304

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L   + P      VD+S  AL +A+ N     +++R    + D +
Sbjct: 141 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 198

Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +     +DVI++NPPY+    +  L  E R  +PR++L GG DG+   R I     RH
Sbjct: 199 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 257

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 258 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 301


>gi|50121993|ref|YP_051160.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49612519|emb|CAG75969.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 310

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++     LP++       ILDL TG+G + +A  +  P  +   VDIS  A
Sbjct: 113 PRSPIGELINNYFDEQLPKVPNL----ILDLCTGSGCIAIACAQAFPEAEVDAVDISSDA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   + +  R   ++SD F  +  + +D+IV+NPPY++   +  L  E R F+P
Sbjct: 169 LAVTEQNIQQHELEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR-FEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 228 ELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG 263


>gi|83748821|ref|ZP_00945834.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum
           UW551]
 gi|83724513|gb|EAP71678.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum
           UW551]
          Length = 300

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L   + P      VD+S  AL +A+ N     +++R    + D +
Sbjct: 137 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 194

Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +     +DVI++NPPY+    +  L  E R  +PR++L GG DG+   R I     RH
Sbjct: 195 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 253

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 254 LKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297


>gi|126348204|emb|CAJ89925.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 273

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L + + R +    +  +LGW +F  +R+ ++   F PR  TE LV  ALA      +  D
Sbjct: 53  LMSLVDRRVTGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVAEALA------QAPD 106

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG----VSERFDTL 153
              ++DL  G+GAV  AL       +    D+   A+  A  N    G      + FD L
Sbjct: 107 AAVVVDLCCGSGAVGAALAAALDRPEVHAADVDPAAVRCALGNLADAGGQVHTGDLFDAL 166

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 ++ G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A   
Sbjct: 167 PD----ALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGADGLDVLRRVAAEA 222

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239
            R L   G   VE    Q    V  F
Sbjct: 223 PRWLAPGGCLLVETSERQAPAAVDAF 248


>gi|307245855|ref|ZP_07527940.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254828|ref|ZP_07536654.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259270|ref|ZP_07540999.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853215|gb|EFM85435.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862199|gb|EFM94167.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866637|gb|EFM98496.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 314

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 VIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  F S
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPS 283


>gi|330469858|ref|YP_004407601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verrucosispora maris AB-18-032]
 gi|328812829|gb|AEB47001.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verrucosispora maris AB-18-032]
          Length = 297

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 12/229 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E +  + G   F ++ L +    F PRPETELL  +       R   R    ++D
Sbjct: 55  RRARREPLQHLTGNAAFRHLELAVGPGVFVPRPETELL--AGWGIEQARRAARPRPLVVD 112

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSD 156
           L +G+GA+ L++ +E P  + V V+ S  AL   + NA     +          D    D
Sbjct: 113 LCSGSGAIALSVAQEVPDARVVAVERSSAALAWLRRNAADRAAAGDRAIEVVEADVTDPD 172

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G  DV++ NPPY+   +   +  EV   DP  ++ GG DGL+  R + +  +  
Sbjct: 173 LLAGLVGQVDVLLCNPPYVPQAV--AVPPEVAGHDPAEAVFGGADGLTVIRPVIERAATL 230

Query: 217 LNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G   VE        V  +  E  +   ++A +D  G  R     R
Sbjct: 231 LRPGGQLGVEHDDTHGAAVPELLAEDGRYTAISAHRDLAGRARFATASR 279


>gi|1575339|gb|AAC44869.1| PapM [Streptomyces pristinaespiralis]
          Length = 292

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 8/230 (3%)

Query: 17  LSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           L++H   V P   D+ L         + + R L  E   RI+G   F   R  L+   F 
Sbjct: 36  LAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMGHRFDLAPGVFV 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           P+PETE +   A+A  L  + +R      ++DL  G G + + L +  P  + +G+++S 
Sbjct: 96  PKPETEEITRDAIA-RLEALVRRGTTAPLVVDLCAGPGTMAVTLARHVPAARVLGIELSQ 154

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            A   A+ NA   G +        D F  + G  D++V+NPPYI  + +     EV + D
Sbjct: 155 AAARAARRNARGTG-ARIVQGDARDAFPELSGTVDLVVTNPPYI-PIGLRTSAPEVLEHD 212

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           P ++L  G +GL   R +    +R L   G+  +E G  Q   V  +F +
Sbjct: 213 PPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262


>gi|111225293|ref|YP_716087.1| N5-glutamine methyltransferase [Frankia alni ACN14a]
 gi|111152825|emb|CAJ64569.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Frankia alni ACN14a]
          Length = 309

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 8/223 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  + G   F  + L +    F PRPETE +V  ALA +LP +     V  
Sbjct: 70  VARRARREPLQHLTGLAGFRYLDLAVGPGVFIPRPETESVVGWALA-ALPSVSGGGPV-C 127

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWF 158
           +DL  G+GA+ L+L  E P  +   V++   AL   + N   +G+       D       
Sbjct: 128 VDLCAGSGAIALSLAGEVPGARVHAVEVDPAALGWLRRNVAASGLPVTVHEADVTAPPIA 187

Query: 159 S--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           S   + G  D++VSNPPY+     D +  EV + DP  +L GG DGL   R +    +R 
Sbjct: 188 SLARLAGSVDLVVSNPPYLPDADRDEVEPEVGEHDPPRALWGGADGLDVVRAVVALAARL 247

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           L   GL +VE      V    +  +   +  V    D  G DR
Sbjct: 248 LRPGGLLAVEHADGHGVAAPGLLRADGRWAEVADHPDLAGRDR 290


>gi|332288130|ref|YP_004418982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330431026|gb|AEC16085.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 320

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 7/164 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A   + P  +   VDIS  AL +A+ N   + +  +   LQSD F+
Sbjct: 146 RILDMCTGSGCIAIACADKFPNAEIDAVDISLDALNVAEINIANHHLEHQVFPLQSDLFN 205

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           ++  EG +D+IVSNPPY+++  +  +  E    +P ++L+ G DGL   + I      +L
Sbjct: 206 NLPKEG-YDLIVSNPPYVDAEDLANMPEEFSH-EPVLALEAGNDGLILAKRIIAAAPEYL 263

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           N +G+   E+G N  V ++  F +     +  FK +GG+   +L
Sbjct: 264 NDNGVLVCEVG-NSMVHLIEQFPTVPFEWIK-FK-HGGDGVFML 304


>gi|89891629|ref|ZP_01203133.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
 gi|89516176|gb|EAS18839.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
          Length = 281

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 12/214 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I G   FY   + ++  T  PR ETE LVD  +       +    + I+D+GTGTG 
Sbjct: 71  IQYITGKAHFYGHEIVVNEHTLIPRQETEELVDMIIKDH----KTESYLNIIDIGTGTGC 126

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVI 168
           + L+L    P      +D+S +AL  A+SNA  N +     T+  D  +   +   +D+I
Sbjct: 127 IGLSLKAAKPDCIVTLMDVSEEALATAQSNA--NHLKTPVKTILQDVLALDELPEKYDII 184

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEI 227
           VSNPPY+ ++    +   V + +P ++L    D  L  YR I +     L  +G+   EI
Sbjct: 185 VSNPPYVRNLEKKEIHDNVLENEPHLALFVEDDNALVFYRKIMELAKIALQPNGILYFEI 244

Query: 228 GYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260
             NQ + + ++   +   F    +KD  GN R++
Sbjct: 245 --NQYLPEEMKALATELGFESEVYKDLNGNYRMM 276


>gi|54308160|ref|YP_129180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photobacterium profundum SS9]
 gi|46912588|emb|CAG19378.1| putative adenine-specific methylase [Photobacterium profundum SS9]
          Length = 310

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ ++   L+SD  
Sbjct: 134 TRIMDLCTGSGCIGIACAHAFPEAEVDLVDISIDALAVAEQNIQDHGLEQQVIPLRSDLL 193

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             V +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R I      +L
Sbjct: 194 RDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVRRILANAPDYL 252

Query: 218 NKDGLCSVEIG 228
             DG+   E+G
Sbjct: 253 KDDGILICEVG 263


>gi|117923619|ref|YP_864236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Magnetococcus sp. MC-1]
 gi|117607375|gb|ABK42830.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Magnetococcus sp. MC-1]
          Length = 340

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 6/197 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           + + ++ I G   F   R  +      PR   E ++D            R + R+LDL T
Sbjct: 117 QRKPVNYITGEAWFAGHRFVVDERVLIPRSRIENVLDDPDGLLGLMEGARPLKRMLDLCT 176

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165
           G+G + +      P+ +   VD+S  AL +A  N   + V+ER   ++S+ F  + G  +
Sbjct: 177 GSGCLAITAALHYPWLQVDAVDLSADALAVAAENVKRHRVTERVRLVRSNLFEKLTGACY 236

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+I++NPPY+ + I   L  E    +P+++L+ G DGL     I    + +L   G+   
Sbjct: 237 DLILTNPPYVPTRIYAGLAAEYHR-EPKMALEAGGDGLDLVIPILQQAAEYLEPGGILLC 295

Query: 226 EIGYNQKVDVVRIFESR 242
           E+G     D   I E R
Sbjct: 296 EVG----DDTQEIMEQR 308


>gi|119775295|ref|YP_928035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella amazonensis SB2B]
 gi|119767795|gb|ABM00366.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella
           amazonensis SB2B]
          Length = 314

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 4/151 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V R+LDL TG+G + +A        +   +DIS  AL++A+ N  ++G+ ER 
Sbjct: 127 PWLYNKPVNRVLDLCTGSGCIAIACAHTFEDAEVDALDISEDALDVAQINVESHGLVERV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++     +D+IVSNPPY++   +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPKGPQYDLIVSNPPYVDEEDIGDMPDEYH-HEPAIGLASGRDGLDITKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           I    + +L   G+  VE+G N  V ++  F
Sbjct: 246 ILANAADYLTPSGILVVEVG-NSMVHLMEQF 275


>gi|319941614|ref|ZP_08015938.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis
           3_1_45B]
 gi|319804844|gb|EFW01698.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis
           3_1_45B]
          Length = 310

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 15/233 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL---GWRD 59
           AL D+   +CR   L      +  D+ L   +   + + I R +  ++    L    W  
Sbjct: 43  ALEDASFLICRALKLPFENFDMFLDAALTHNELVRIVHLIDRRVHDKTPTAYLLKEAW-- 100

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118
               R  +      PR     L++  LA   P     + V+ +LDL TG+G  CLA+L +
Sbjct: 101 LTEHRFYIDERALIPRSYIAELLEEDLA---PWAADPEAVQSVLDLCTGSG--CLAILAQ 155

Query: 119 SPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
             F   K  G DIS  ALE+AK N     + E  + +QSD F +++G  FD+I+SNPPY+
Sbjct: 156 GAFPNAKVTGSDISQAALEVAKINRRDYDMEETLELVQSDLFENLQGRRFDIIISNPPYV 215

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +  ++ L  E R  +P ++L  G DG+   R I    + HL ++G   VE+G
Sbjct: 216 TTDAMERLPSEYR-HEPALALAAGADGMDVVRRILAEAADHLTEEGFIVVEVG 267


>gi|300691621|ref|YP_003752616.1| adenine-specific methylase [Ralstonia solanacearum PSI07]
 gi|299078681|emb|CBJ51339.1| putative adenine-specific methylase [Ralstonia solanacearum PSI07]
          Length = 304

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 13/209 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-- 117
            + +R  +      PR     L++  LA  LP   +     +L+L TG+G  CLA+L   
Sbjct: 102 MHGMRFYVDERVIVPRSFIGELLEDGLAPWLPY--EDGPTDVLELCTGSG--CLAILAAL 157

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           + P      VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+
Sbjct: 158 QWPNATLDAVDLSPDALVVAQRNVDDYHLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYV 217

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V
Sbjct: 218 NETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENV 275

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              F    L          G ++V L  R
Sbjct: 276 EAAFPDLDLVW---LPTSAGEEQVFLVTR 301


>gi|239917333|ref|YP_002956891.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665]
 gi|281414187|ref|ZP_06245929.1| putative methylase of HemK family protein [Micrococcus luteus NCTC
           2665]
 gi|239838540|gb|ACS30337.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665]
          Length = 300

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 117/273 (42%), Gaps = 26/273 (9%)

Query: 6   DSHSFLCRVTGLSSHQVI--VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L  V GL    ++  V   +V +  Q       + R    E +  + G   F+ +
Sbjct: 28  DAELLLGHVLGLDRGALLARVFAGAVAEPAQAAGFEALVGRRAAREPVQHLTGVAHFHGL 87

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETELLV++ +A    R     VV   DL TG+GA+ +A+   + + +
Sbjct: 88  DLAVGPGVFIPRPETELLVEAVVADLAARPAAGVVV---DLCTGSGAIAVAV---AAWGE 141

Query: 124 GVGVDISCKALEI-------AKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPP 173
             G  ++  A+E+       A+ N    GV    D  Q D   +   +EG  DV+VSNPP
Sbjct: 142 ARGRPLAVTAVELDPTAADWARRNLAPRGV----DLRQGDALVACPDLEGRVDVVVSNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           Y+    V     E R  DP  +L GG   GL   R IA   +  L  DGL ++E    Q 
Sbjct: 198 YVPEAEVPAQ-PEAR-LDPARALYGGDAPGLRIPRAIAHRAAELLAPDGLFAMEHHETQG 255

Query: 233 VDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             ++    +   F  V    D    DR L   R
Sbjct: 256 PALLAALGADPRFTGVRVHPDLTARDRFLTARR 288


>gi|53729016|ref|ZP_00134269.2| COG2890: Methylase of polypeptide chain release factors
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208419|ref|YP_001053644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae L20]
 gi|307250187|ref|ZP_07532145.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307256997|ref|ZP_07538773.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|126097211|gb|ABN74039.1| hypothetical adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306857786|gb|EFM89884.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306864481|gb|EFM96388.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 314

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  F S
Sbjct: 262 DNGVLVCEVG-NSMVHLMEQFPS 283


>gi|119952994|ref|YP_945203.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           turicatae 91E135]
 gi|119861765|gb|AAX17533.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           turicatae 91E135]
          Length = 277

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 14/211 (6%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ + +  L  ++   L+  I R      I+ IL  ++F  +   ++     PR +TE L
Sbjct: 35  ILANINKNLTKQEEHKLSCQINRIRSGTPINYILKTKEFMGIEFYINKHVLIPREDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV--DISCKALEIAKS 139
           V+ AL     +I+K ++ +ILDL  G+G + L +   + + K      DIS KAL+++  
Sbjct: 95  VEEALI----QIKKHNLNKILDLCCGSGCIGLTI---AHYLKCKVTLSDISNKALKVSLK 147

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDG 198
           N     +    +   SD    +   F++I++NPPY+     D L ++ +   +PRI+L G
Sbjct: 148 NTQKLKLENYIEIQYSDLLKYINKEFELIITNPPYLNK---DELKIKEKLIKEPRIALLG 204

Query: 199 -GIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            G DGL   + I       L K+GL  +E+ 
Sbjct: 205 FGKDGLEIPKKIIRQAKHKLAKNGLLIIEMA 235


>gi|209554022|ref|YP_002284417.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|209541523|gb|ACI59752.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 290

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 11/222 (4%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +  + + RILG+  F   R  +  + F  R ETELLVD  +   + +     +  ++D+ 
Sbjct: 65  INEKPLERILGYGYFCGRRFCVDENVFAFRVETELLVD--VINKIIKQSTHQIKSVIDVC 122

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162
            G+G + L++           +DIS  A+  +K NA  +   G++    ++Q  +F   +
Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220
             FD+I+ NPPYI+S     L  +V D+DP  +L      DG+S Y  I + +S   NK 
Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFENKDGISFYLFIINNISLICNKK 239

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
                EIGY+QK  +  + +  +  +   F  DY    R+L+
Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281


>gi|207723342|ref|YP_002253741.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2]
 gi|206588540|emb|CAQ35503.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2]
          Length = 304

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 11/168 (6%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L   + P      VD+S  AL +A+ N     +++R    + D +
Sbjct: 141 VLELCTGSG--CLAILAALQWPNATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLY 198

Query: 159 SSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +     +DVI++NPPY+    +  L  E R  +PR++L GG DG+   R I     RH
Sbjct: 199 APLPPGVHYDVILTNPPYVNETSMQALPPEYR-AEPRMALAGGTDGMDIVRRILADAPRH 257

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G+  +EIG N++ +V   F    L          G D+V L  R
Sbjct: 258 LKPHGVLVIEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 301


>gi|317125569|ref|YP_004099681.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Intrasporangium calvum DSM 43043]
 gi|315589657|gb|ADU48954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Intrasporangium calvum DSM 43043]
          Length = 291

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 35/219 (15%)

Query: 6   DSHSFLCRVTGLSSHQV----IVD---PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           D+      V G+++H+V    IV    PDS  +         A    L+H     + G  
Sbjct: 26  DAVELAAHVLGVAAHEVRRRMIVGGSLPDSFDEAYAAVLAERARRVPLQH-----LTGRA 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALL 116
            F  + L +    F PRPETE++V+ ALA  + R+   +   +R++DL +G+GA+ LA+ 
Sbjct: 81  PFRTLTLHVGPGVFVPRPETEVVVELALA-EVDRLLGTRPSGIRLVDLCSGSGAIALAVK 139

Query: 117 KESPFFKGVGVDISCKALEIAKSN--------AVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            E P      +++S  A+  A +N        A+  G  +  +    DW  SV    D++
Sbjct: 140 TERPRVHVRAIELSGDAVAWATANRDRLGLDVAILQG--DATEPAIPDWSGSV----DLV 193

Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGGI-DGLS 204
            +NPPYI S  V VD    EVRD DP ++L GG  DGL+
Sbjct: 194 TANPPYIPSDAVPVDP---EVRDHDPEVALYGGSEDGLA 229


>gi|303252986|ref|ZP_07339141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307247931|ref|ZP_07529965.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648177|gb|EFL78378.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306855581|gb|EFM87750.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 314

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I      +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPQEFH-HEPELALGSGVDGLDITKRILAEAPNYLA 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            +G+   E+G N  V ++  F S     V
Sbjct: 262 DNGVLVCEVG-NSMVHLMEQFPSVPFHWV 289


>gi|260772337|ref|ZP_05881253.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
           CIP 69.14]
 gi|260611476|gb|EEX36679.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
           CIP 69.14]
          Length = 234

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD F
Sbjct: 58  TRIMDLCTGSGCIAIACAYAFPEAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRSDLF 117

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + +  +D+IV+NPPY++   ++ L  E +  +P + L  G DGL   R I      +L
Sbjct: 118 RDLPKEQYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLARRILANAPHYL 176

Query: 218 NKDGLCSVEIG 228
             +G+   E+G
Sbjct: 177 TDNGILVCEVG 187


>gi|149188130|ref|ZP_01866425.1| N5-glutamine methyltransferase [Vibrio shilonii AK1]
 gi|148838118|gb|EDL55060.1| N5-glutamine methyltransferase [Vibrio shilonii AK1]
          Length = 310

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            + VRI+DL TG+G + +A     P  +   +DIS  ALE+A+ N   +G+ ++   ++S
Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALEVAEQNVQDHGLEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILSNAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 250 DYLTDNGILICEVG 263


>gi|124028185|ref|YP_001013505.1| methyltransferase [Hyperthermus butylicus DSM 5456]
 gi|123978879|gb|ABM81160.1| predicted Methyltransferase [Hyperthermus butylicus DSM 5456]
          Length = 198

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 13/130 (10%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            V   +S++ F PR     T LL++ A+          +   +LD+G G GA+ + L K 
Sbjct: 26  TVEFYVSTEVFSPREVDEGTRLLIEHAIV--------PEEGTVLDMGCGYGAIGITLAKA 77

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            P    V VD++ KA+E+A+ NA  NGV  R + LQ D +  V+G  FD I+SNPP    
Sbjct: 78  HPRLHVVMVDVNPKAVELARLNARHNGVENRVEVLQGDLYEPVKGYHFDAIISNPPLAAG 137

Query: 178 V-IVDCLGLE 186
           + I++ L LE
Sbjct: 138 MKIIEKLILE 147


>gi|284009280|emb|CBA76407.1| methylase [Arsenophonus nasoniae]
          Length = 310

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A   E P  +   VDIS  AL + + N   +G ++R   + SD F +
Sbjct: 136 ILDMCTGSGCIAIACAHEFPQAQIDAVDISVDALAVTEQNITAHGFADRIVPICSDLFLN 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + ++V+V+NPPY+++  +  L  E    +P+++L  G DGL   R I    SR L +
Sbjct: 196 MPPIKYNVMVTNPPYVDAEDMSDLPAEYL-VEPKLALAAGSDGLKLVRRILANASRFLTE 254

Query: 220 DGLCSVEIG 228
           +G+   E+G
Sbjct: 255 NGVLICEVG 263


>gi|299142047|ref|ZP_07035181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella oris C735]
 gi|298576509|gb|EFI48381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella oris C735]
          Length = 288

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 7/239 (2%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AF 88
           L D ++  +   I R    E +  ++G   F      ++     PRPETE+L    + A+
Sbjct: 46  LTDEEKVRMETLIERLEAGEPVQYVVGKARFCGRDYMVAPGVLIPRPETEMLCKEVISAY 105

Query: 89  SLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTN 144
           + P   ++    +R+LD+GTG+G + + L  +         DIS  AL IA+ NA  +  
Sbjct: 106 NRPYCTLQPPAPLRVLDIGTGSGCIAVTLALDLWNCTVTAWDISGDALMIARENAHRLQA 165

Query: 145 GVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202
            V+ E  D L  D  +     FD+IVSNPPYI       +   +   +P  +L     D 
Sbjct: 166 HVNLELQDALNPDETALNASPFDIIVSNPPYICIRESKDMAKHILAHEPHTALFVPDDDP 225

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  YR+IA     HL   G+ + EI      +  ++ E      +   +D  G +R+++
Sbjct: 226 LLFYRSIAHYGLSHLKPSGMLAFEINPIYAEETCKMLEHMGYEQIERKEDQYGKERIVI 284


>gi|238898679|ref|YP_002924360.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466438|gb|ACQ68212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 311

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 2/134 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             ILD+ TG+G + +A  +  P  +   VDIS  AL +A+ N    G+  R   + SD F
Sbjct: 138 AHILDMCTGSGCIAIACAEAFPEAEVDAVDISRGALAVAECNIEQYGLENRVTPIYSDLF 197

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + +  + +D+IV+NPPY+++  ++ L  E   F+PR+ L+ G DGL   + I     R L
Sbjct: 198 NDLPRITYDLIVTNPPYVDAKDMNDLPPEFL-FEPRLGLEAGEDGLKLVQRILSSAGRFL 256

Query: 218 NKDGLCSVEIGYNQ 231
            + G+   E+G +Q
Sbjct: 257 KEKGVLICEVGNSQ 270


>gi|285017772|ref|YP_003375483.1| adenine-specific methylase [Xanthomonas albilineans GPE PC73]
 gi|283472990|emb|CBA15495.1| putative adenine-specific methylase protein [Xanthomonas
           albilineans]
          Length = 312

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 3/146 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  R V R LDL TG+G + +A+   +P ++   VDIS +AL +A  N     +++  
Sbjct: 127 PWLAGRAVSRALDLCTGSGCIAIAMGHYNPNWQVDAVDISDEALALAAENK-QRLLADNV 185

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             ++SD F+ + G  +++IV+NPPY+     D L  E    +P + L  G DGL     I
Sbjct: 186 ALVKSDLFAGLGGRRYELIVTNPPYVTHAETDALPPEYA-HEPELGLRAGEDGLDLALKI 244

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV 235
                 HL++DGL   E+G +++  V
Sbjct: 245 LRDAPAHLSEDGLLICEVGESERALV 270


>gi|148272854|ref|YP_001222415.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830784|emb|CAN01724.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 288

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 4/178 (2%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LGW  F   R+ +    F PR  TE L  +A+  +     + D   ++DL  G+GA+  
Sbjct: 74  VLGWAAFAGRRIIVRPGVFVPRRRTERLARAAVDAA----REVDAPTVVDLCCGSGAIAA 129

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +  + P       D+   A+  A +N +  GV+     L     +++ G  DV+V+N P
Sbjct: 130 VVADDVPGAVVHAADVDAVAVACAAANLIPRGVAVHRGDLMEALPTALRGRIDVLVANVP 189

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           Y+ S  +  +  E R  +P  + DGG DGL   R +A G    L  DGL  VE+   Q
Sbjct: 190 YVPSAGLALMPPEARLHEPEATRDGGADGLDVLRRVARGSGSWLAPDGLLLVEVADEQ 247


>gi|297196470|ref|ZP_06913868.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153226|gb|EFH32221.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|302607841|emb|CBW45752.1| N-methylase [Streptomyces pristinaespiralis]
          Length = 292

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 18/235 (7%)

Query: 17  LSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           L++H   V P   D+ L         + + R L  E   RI+G   F   R  L+   F 
Sbjct: 36  LAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMGHRFDLAPGVFV 95

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVG 126
           P+PETE +   A+A    R+E   +VR       ++DL  G G + + L +  P  + +G
Sbjct: 96  PKPETEEITRDAIA----RLEA--LVRRGTPAPLVVDLCAGPGTMAVTLARHVPAARVLG 149

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +++S  A   A+ NA   G +        D F  + G  D++V+NPPYI  + +     E
Sbjct: 150 IELSQAAARAARRNARGTG-ARIVQGDARDAFPELSGTVDLVVTNPPYI-PIGLRTSAPE 207

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           V + DP ++L  G +GL   R +    +R L   G+  +E G  Q   V  +F +
Sbjct: 208 VLEHDPPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262


>gi|237812823|ref|YP_002897274.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei MSHR346]
 gi|237502756|gb|ACQ95074.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei MSHR346]
          Length = 307

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 15/165 (9%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E  ++V  +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ 
Sbjct: 122 PYVEDPELVGSVLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLD 179

Query: 148 ERFDTLQSDWFSSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           E+      D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG
Sbjct: 180 EQIALYHGDLYAPLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGG 238

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DG+   R I     R L  DG+  VEIG N++ +V   F   +L
Sbjct: 239 ADGMDIVRRIIGEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|167563203|ref|ZP_02356119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia oklahomensis EO147]
 gi|167570387|ref|ZP_02363261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia oklahomensis C6786]
          Length = 307

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 17/172 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L    F       VD+S  ALE+AK N    G+ E+      D +
Sbjct: 133 VLELCTGSG--CLAILAALAFPNASVDAVDLSADALEVAKINRGDYGLDEQIALHHGDLY 190

Query: 159 SSV--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           + +        E  +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+   R I 
Sbjct: 191 APLPPSRSLDPEQRYDVIITNPPYVNADSMAELPAEYR-HEPEMALAGGADGMDIVRRII 249

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
               R L  DG+  VEIG N++ +V   F    L  ++      G+D V L 
Sbjct: 250 GEARRWLKDDGVLVVEIG-NERANVEAAFGGLDLVWLST---SAGDDGVFLI 297


>gi|57167734|ref|ZP_00366874.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228]
 gi|57020856|gb|EAL57520.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228]
          Length = 266

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D    F     ++R  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYF----ELIRRFKSGEPFEYIFEKADFWGLEFKVKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ++E+L+   L       +  +   IL++G G+G + + L KE    K    DI
Sbjct: 81  GVLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKELGI-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KAL++A  NA  + V    D    D F  ++  +D I SNPPYI+ S  +D   L V+
Sbjct: 136 NPKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYPID---LWVQ 191

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + +P+ +L GG  G   Y  + + ++     K    + E GY+QKV + +I   +K F  
Sbjct: 192 N-EPKEALFGGEKG---YEILEEIITFSFERKVKFLACEFGYDQKVILKQIL-YQKNFQA 246

Query: 248 NAFKDYGGNDRVLL 261
             F+D  G DR  +
Sbjct: 247 EFFQDEQGYDRAFV 260


>gi|322514692|ref|ZP_08067720.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC
           25976]
 gi|322119390|gb|EFX91499.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC
           25976]
          Length = 314

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 7/151 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIEHHQVAHRVFPISSDLFT 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRH 216
            + +  +D+IV+NPPY++    + LG   ++F  +P ++L  G+DGL   + I      +
Sbjct: 203 DIPQDKYDLIVTNPPYVDQ---EDLGYMPQEFHHEPELALGSGVDGLDITKRILAEAPNY 259

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           L  +G+   E+G N  V ++  F S     V
Sbjct: 260 LADNGVLVCEVG-NSMVHLMEQFPSVPFHWV 289


>gi|29827834|ref|NP_822468.1| methytransferase [Streptomyces avermitilis MA-4680]
 gi|29604935|dbj|BAC69003.1| putative methytransferase [Streptomyces avermitilis MA-4680]
          Length = 272

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 88/189 (46%), Gaps = 6/189 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LGW  F+ +R+T+    F PR  TE LVD A++ +      R+V  ++DL  G+GA
Sbjct: 56  LEHVLGWAGFHGLRITVDPGVFVPRRRTEFLVDLAVSLA------REVSVVVDLCCGSGA 109

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V  AL       +    DI   A+  A+ N    G       L +     + G  D++ +
Sbjct: 110 VAAALAASLDGPELHAADIDPAAVRCARRNLAACGGHVHEGDLFTALPGHLRGRVDILAA 169

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           N PY+ +  V  L  E RD +P ++LDGG DGL   R +    SR L+  G   VE    
Sbjct: 170 NVPYVPTDEVGLLPPEARDHEPLVALDGGSDGLDILRRVTAEASRWLSPGGSLLVETSER 229

Query: 231 QKVDVVRIF 239
           Q    V  F
Sbjct: 230 QASLAVETF 238


>gi|167586839|ref|ZP_02379227.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ubonensis Bu]
          Length = 304

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 17/179 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S KALE+A+ N    G+ +R  
Sbjct: 124 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSGKALEVAEINVRDYGLEDRIS 181

Query: 152 TLQSDWFSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
             + D ++ +           +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+
Sbjct: 182 LHRGDLYAPLPLFRSSEPGARYDVILTNPPYVNAASMAALPPEYR-HEPEMALAGGEDGM 240

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              R I       L+ DG+  VEIG N++  V   F   +L          G D V L 
Sbjct: 241 DVVRRIIGEARNWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGEDSVFLI 295


>gi|328880846|emb|CCA54085.1| Methylase of polypeptide chain release factors [Streptomyces
           venezuelae ATCC 10712]
          Length = 260

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 6/183 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++GW  F  +R+ + +  F PR  TE L++ A+  + P          +DL  G+G
Sbjct: 51  PLEHVVGWAGFAGLRVEVDAGVFVPRRRTEFLMEHAVELARPG------AVCVDLCCGSG 104

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A    LL      +    DI   A+  A+ N    G       L +     + G  +++V
Sbjct: 105 AAGAVLLDRVEGAEVHASDIEPAAVRCARRNVEPRGGRVYEGDLFAPLPPELRGRVEILV 164

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ +  +  L  E RD +P ++LDGG DGL   R +A G    L   G   VE   
Sbjct: 165 ANVPYVPTEDIGLLPPEARDHEPLVTLDGGPDGLDVLRRVAAGAPEWLAPGGHLLVETSE 224

Query: 230 NQK 232
            Q 
Sbjct: 225 RQA 227


>gi|330445416|ref|ZP_08309068.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489607|dbj|GAA03565.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 310

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ ++   L+S
Sbjct: 131 QEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISPDALAVAEQNIADHGLEQQVIPLRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D    V +  +D++V+NPPY++   +D L  E R  +P + L  G DGL   R I     
Sbjct: 191 DLLRDVPKDKYDLLVTNPPYVDQEDMDSLPDEFR-HEPELGLAAGSDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L +DG+   E+G
Sbjct: 250 DYLKEDGILICEVG 263


>gi|182413246|ref|YP_001818312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Opitutus terrae PB90-1]
 gi|177840460|gb|ACB74712.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Opitutus terrae PB90-1]
          Length = 306

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 7/156 (4%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAK 138
           L+  AL   LP   +R + R +D+ TG+G  CLA+L    F + V   +D+S  AL++A 
Sbjct: 123 LIPGALRDWLPDHGRR-LKRAVDVCTGSG--CLAILLAHEFPRAVVDAIDVSTPALDVAV 179

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   + + +R    QSD F  V    +D+I+SNPPY  S  VD    E    +PR++ D
Sbjct: 180 INVREHRLGQRVHLFQSDVFDEVPAARYDIILSNPPYEPSRHVDRQAPEF-AAEPRLAHD 238

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           GG DGL   R +       L   G+  +E+G  +KV
Sbjct: 239 GGPDGLMIIRKLLHQAKGRLAPHGIVVIEVGGLRKV 274


>gi|148689236|gb|EDL21183.1| HemK methyltransferase family member 1, isoform CRA_b [Mus
           musculus]
          Length = 276

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 23/233 (9%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102
           L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +  +D   IL
Sbjct: 42  LQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVARRPHAVRAQDGPLIL 101

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++G G+GA+ L+LL + P  + V VD    A+ +   NA    + +R   +  D  S  E
Sbjct: 102 EVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENARRLQLQDRIRIICLDITS--E 159

Query: 163 GL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIA 210
           G           D++VSNPPYI    ++ L  E+  ++  ++LDGG +G+   +H  T+A
Sbjct: 160 GCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLA 219

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
             +   LN  G   +E+       V    +S     L LV   +D+ G  R L
Sbjct: 220 PQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 269


>gi|326795497|ref|YP_004313317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Marinomonas mediterranea MMB-1]
 gi|326546261|gb|ADZ91481.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Marinomonas mediterranea MMB-1]
          Length = 300

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 18/239 (7%)

Query: 23  IVDPDSVLDDRQRFF-LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++D    +D+R+R   L ++  R  K E +  +LG   F  +   ++ DT  PR     L
Sbjct: 61  MLDSRLTIDERKRIVKLVHS--RISKREPLPYLLGKAWFMGLDFKVTKDTLIPRSPIMTL 118

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAK 138
           +++     LP       + +LD+ TG+G + +A    +  F+   VD   IS  AL++A+
Sbjct: 119 IENEFQPWLPHYP----MNVLDMCTGSGCIGIA---TALAFEDAEVDLSDISSAALDVAR 171

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N     + +R   ++SD F  + G  +D+IV NPPY+++        E  + +P+++L 
Sbjct: 172 YNVSDYDLDDRVSVIESDMFDGLAGNKYDLIVCNPPYVDAQDYSSAPAEFHN-EPQLALT 230

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            G DGL   R      + +L+  G+   E+G N +V +   +   +   V    + GGN
Sbjct: 231 SGDDGLDFTRRFLSQAANYLHDSGIVVYEVG-NSEVALQAAYPDTEFMWVEL--EQGGN 286


>gi|161524417|ref|YP_001579429.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|189350828|ref|YP_001946456.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|221198337|ref|ZP_03571383.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2M]
 gi|221208276|ref|ZP_03581280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2]
 gi|221215443|ref|ZP_03588407.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD1]
 gi|160341846|gb|ABX14932.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans ATCC 17616]
 gi|189334850|dbj|BAG43920.1| putative adenine-specific DNA-methyltransferase [Burkholderia
           multivorans ATCC 17616]
 gi|221164627|gb|EED97109.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD1]
 gi|221171924|gb|EEE04367.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2]
 gi|221182269|gb|EEE14670.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2M]
          Length = 302

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 16/178 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L  S F       VD+S  ALE+A+ N    G+ +R  
Sbjct: 123 DPEQVGAVLELCTGSG--CLAILAASAFPNAEIDAVDLSADALEVAQINVRDYGLEDRIT 180

Query: 152 TLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
             + D ++ +          +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+ 
Sbjct: 181 LHRGDLYAPLPAFRAQPDARYDVILTNPPYVNAASMAKLPPEYR-HEPEMALAGGDDGMD 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             R I       L+ DG+  VEIG N++  V   F   +L          G+D V L 
Sbjct: 240 IVRRIVAEAHNWLHDDGVLVVEIG-NEREHVEAAFGGLEL---TWLPTSAGDDNVFLI 293


>gi|261333113|emb|CBH16108.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 420

 Score = 73.6 bits (179), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 28/156 (17%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGT 106
           H+ +  I+G + FY   +  S     PRPETE+     +   L +I E    +R+LD+  
Sbjct: 160 HKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWLSKIPETTQPLRVLDMCC 219

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV---- 161
           GTG V +A+ K  P  +   VDI  +A+  ++ NA  NG+ + RF TL+SD F S     
Sbjct: 220 GTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEASRFCTLKSDMFESFLVSN 279

Query: 162 ----------------------EGLFDVIVSNPPYI 175
                                  G FD+IVSNPPY+
Sbjct: 280 SGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYV 315


>gi|251792179|ref|YP_003006899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter aphrophilus NJ8700]
 gi|247533566|gb|ACS96812.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Aggregatibacter aphrophilus NJ8700]
          Length = 316

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A  ++ P      VD+S  AL +A+ N   + +S R   +QSD FS
Sbjct: 145 RILDMCTGSGCIAIACAEQFPQADVDAVDLSIDALNVAEMNIERHNLSHRVFPIQSDLFS 204

Query: 160 S-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +E  +D+IV+NPPY++   +  +  E   ++P ++L  G DGL   + I      +L 
Sbjct: 205 HLLEEQYDLIVANPPYVDLEDLSDMPEEFH-YEPEMALGSGNDGLDITKEILRMAPNYLT 263

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            +GL   E+G N  V ++  +
Sbjct: 264 DNGLLICEVG-NSMVHLIEQY 283


>gi|39934242|ref|NP_946518.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris CGA009]
 gi|39648090|emb|CAE26610.1| possible adenine-specific methylase [Rhodopseudomonas palustris
           CGA009]
          Length = 340

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + R+LDL TG+G  CLA+L    F       VD+S  AL +A  N   + + +R      
Sbjct: 175 IERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHG 232

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+I++NPPY+++  +  L  E R  +P ++ DGG DGL+  R I     
Sbjct: 233 DLFGPLGDERYDLIITNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILAEAK 291

Query: 215 RHLNKDGLCSVEIG 228
            HLN DG    E+G
Sbjct: 292 HHLNPDGGLLCEVG 305


>gi|71748306|ref|XP_823208.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832876|gb|EAN78380.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 420

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 28/156 (17%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGT 106
           H+ +  I+G + FY   +  S     PRPETE+     +   L +I E    +R+LD+  
Sbjct: 160 HKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWLSKIPETTQPLRVLDMCC 219

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV---- 161
           GTG V +A+ K  P  +   VDI  +A+  ++ NA  NG+ + RF TL+SD F S     
Sbjct: 220 GTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEASRFCTLKSDMFESFLVSN 279

Query: 162 ----------------------EGLFDVIVSNPPYI 175
                                  G FD+IVSNPPY+
Sbjct: 280 SGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYV 315


>gi|261493622|ref|ZP_05990142.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261495460|ref|ZP_05991908.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308965|gb|EEY10220.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261310804|gb|EEY11987.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 314

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 7/152 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I K +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + VS R   
Sbjct: 136 IIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFP 195

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209
           + SD F+++ +  +D+IV+NPPY++    + LG    +F  +P ++L  G DGL   + I
Sbjct: 196 ICSDLFNNLPQDKYDLIVTNPPYVDE---EDLGDMPEEFHHEPALALGSGKDGLDLTKRI 252

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               + +LN DG+   E+G N  V ++  F S
Sbjct: 253 LAQAADYLNDDGVLVCEVG-NSMVHLIEQFPS 283


>gi|260899980|ref|ZP_05908375.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AQ4037]
 gi|308107260|gb|EFO44800.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AQ4037]
          Length = 310

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILICEVG 263


>gi|294463809|gb|ADE77429.1| unknown [Picea sitchensis]
          Length = 400

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 87/197 (44%), Gaps = 5/197 (2%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  K      I+G   + +V L++      PRP TE L++ A   ++            D
Sbjct: 172 RVEKRRPFQYIVGCSHWRDVVLSVQEGVLIPRPVTEELIEIAQK-AIATDGSLATGVWAD 230

Query: 104 LGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---S 159
           LGTG+GA+ + L +   P    V VD+S  AL IA+ N     +  R +  Q  WF    
Sbjct: 231 LGTGSGALAIGLAQLLDPEGHVVAVDLSHVALSIARYNVQRYELQARVEVRQGSWFLPLQ 290

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G    ++SNPPYI    +  L  EV   +PR++L+GG +G+     +  G    L  
Sbjct: 291 DVNGKLAGVLSNPPYIPEDQIPGLQAEVGKHEPRLALNGGQEGIEDLLHLCRGCISALRS 350

Query: 220 DGLCSVEIGYNQKVDVV 236
            G    E    ++ D +
Sbjct: 351 GGFLGFETNGERQADAL 367


>gi|283956131|ref|ZP_06373618.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792451|gb|EFC31233.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 271

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D +  F     ++R  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIEIDHKPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ++E+L+   L       +K    +IL++G G+G + + L KE    K    DI
Sbjct: 81  GVLIPRYDSEILLFQILNLC----KKNTFNKILEIGFGSGILSIVLAKELGL-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247
             +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+V
Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246

Query: 248 NAFKDYGGNDRVLL 261
           + FKD  G +R  +
Sbjct: 247 DFFKDEQGYNRAFI 260


>gi|281424787|ref|ZP_06255700.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302]
 gi|281401157|gb|EFB31988.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302]
          Length = 288

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 7/239 (2%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-F 88
           L D ++  +   I R    E +  ++G   F      ++     PRPETE+L    ++ +
Sbjct: 46  LTDDEKARMETLIERLEAGEPVQYVVGKARFCGRDYMVAPGVLIPRPETEMLCKEVISTY 105

Query: 89  SLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTN 144
           + P   ++  + +R+LD+GTG+G + + L  +         DIS  +L IA+ NA  +  
Sbjct: 106 NKPYCALQPPEPLRVLDIGTGSGCIAVTLALDLWNCTVTAWDISGDSLIIARENAHRLQA 165

Query: 145 GVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDG 202
            V+ E  D L  D  +     FD+IVSNPPYI +     +   V   +P  +L     D 
Sbjct: 166 HVNLELQDALNPDETALNAPPFDIIVSNPPYICTRESKDMAKHVLAHEPHTALFVPDDDP 225

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  YR+IA     HL   G+ + EI      +  ++ E      + + +D  G +R+++
Sbjct: 226 LLFYRSIAHYGLSHLKPSGMLAFEINPIYAEETCKMLEHMGYEQIESKEDQYGKERIVI 284


>gi|254360980|ref|ZP_04977125.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|153092466|gb|EDN73521.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica PHL213]
          Length = 314

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 7/152 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I K +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + VS R   
Sbjct: 136 IIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFP 195

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTI 209
           + SD F+++ +  +D+IV+NPPY++    + LG    +F  +P ++L  G DGL   + I
Sbjct: 196 ICSDLFNNLPQDKYDLIVTNPPYVDE---EDLGDMPEEFHHEPALALGSGKDGLDLTKRI 252

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               + +LN DG+   E+G N  V ++  F S
Sbjct: 253 LAQAADYLNDDGVLVCEVG-NSMVHLIEQFPS 283


>gi|332283976|ref|YP_004415887.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
 gi|330427929|gb|AEC19263.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
          Length = 298

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 94/195 (48%), Gaps = 14/195 (7%)

Query: 74  PRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDIS 130
           PR     L+D  LA   P + +  DV  +LDL TG+G  CLA+L    F       VD+S
Sbjct: 109 PRSPISELLDDGLA---PWVADADDVDFVLDLCTGSG--CLAVLAALAFPNAQVDAVDLS 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A  N   +G+  R  T  SD F  +    + +I+ NPPY+ +  ++ L  E R 
Sbjct: 164 EHALEVADENIELSGLDGRITTHCSDLFEQLPDCEYKLIICNPPYVNNHSMEHLPQEYR- 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P ++L GG DG+   R +       +  DGL  +EIG+  +  +    E   ++L   
Sbjct: 223 HEPTMALAGGDDGMDLIRRLLQQAPAFMAPDGLLVLEIGHEYQNFLAAFPELDPVWLSTE 282

Query: 250 FKDYGGNDRVLLFCR 264
             D    D++LL  R
Sbjct: 283 NTD----DQILLLTR 293


>gi|28898977|ref|NP_798582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836932|ref|ZP_01989599.1| hypothetical adenine-specific methylase YfcB [Vibrio
           parahaemolyticus AQ3810]
 gi|260365277|ref|ZP_05777834.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus K5030]
 gi|260878827|ref|ZP_05891182.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AN-5034]
 gi|260896251|ref|ZP_05904747.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus Peru-466]
 gi|28807196|dbj|BAC60466.1| putative adenine-specific methylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149749705|gb|EDM60450.1| hypothetical adenine-specific methylase YfcB [Vibrio
           parahaemolyticus AQ3810]
 gi|308088797|gb|EFO38492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus Peru-466]
 gi|308094294|gb|EFO43989.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AN-5034]
 gi|308115430|gb|EFO52970.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus K5030]
 gi|328474485|gb|EGF45290.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus 10329]
          Length = 310

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILICEVG 263


>gi|332298738|ref|YP_004440660.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema brennaborense DSM 12168]
 gi|332181841|gb|AEE17529.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema brennaborense DSM 12168]
          Length = 346

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 119/297 (40%), Gaps = 45/297 (15%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L R+ G+    +   P++VL + Q     +A+        +  I G ++F+ +  
Sbjct: 50  DCDCILSRLLGVPRSYLFSHPETVLTEPQCAAFFDAVRLRRTGLPVAYITGHKEFWALDF 109

Query: 66  TLSSDTFEPRPETELLVDSALA----------------------FSLPRIEKRDVVRILD 103
            ++     P+P+TELLV+ AL                       F+ P       VRI D
Sbjct: 110 LVTRAVLIPKPDTELLVERALETVARIVGANRPAPPAEGDESGDFAAPPCAS---VRIAD 166

Query: 104 LGTGTGAVCLALLKESPF-----FKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQS 155
           + TG+G V +++L   P+     ++    DIS  AL +A+ NA   +    +   D  + 
Sbjct: 167 VCTGSGCVAVSILHTLPYRADIRYEMYATDISPAALSVARENAKRLLKAPAAYTLDFFEG 226

Query: 156 DWFS-----SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL----DGGIDGLS 204
           D        +V G   FD+IVSNPPY+ + +   L  + R  +P ++L    DG  DG  
Sbjct: 227 DLLEPLLSDAVSGKESFDLIVSNPPYVPADVTARLLADGRS-EPELALNGDCDGTTDGTG 285

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R +       L + G   +E G                  +  + D GG  RV L
Sbjct: 286 LLRRLIGQARWALKRGGFFLIETGEYNAAAAASYLAKNGFTDIVTYTDLGGMPRVTL 342


>gi|270262881|ref|ZP_06191152.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13]
 gi|270043565|gb|EFA16658.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13]
          Length = 324

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 74  PR-PETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           PR P  EL+ D  SAL    PR        ILD+ TG+G + +A     P  +   VDIS
Sbjct: 127 PRSPIGELINDHFSALIPHPPR-------HILDMCTGSGCIAIACGYAFPEAEVDAVDIS 179

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
              L + + N   +GV  +   ++SD F  V  + +D+IV+NPPY+++  +  L  E R 
Sbjct: 180 SDVLAVTERNIQAHGVEHQVIPIRSDLFRDVPAIQYDLIVTNPPYVDAEDMSDLPQEFR- 238

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           F+P + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 239 FEPELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVG 277


>gi|150376492|ref|YP_001313088.1| HemK family modification methylase [Sinorhizobium medicae WSM419]
 gi|150031039|gb|ABR63155.1| modification methylase, HemK family [Sinorhizobium medicae WSM419]
          Length = 280

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 11/207 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L L+     PR ETELL  +A A      E      ++D+  G+G + L +  E 
Sbjct: 60  FMDIDLELAPGVLVPREETELLGRTAAAILR---EAARPATVVDMCCGSGNLALGIAAEV 116

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGL---FDVIVSNPPY 174
           P  +  G D++   + +A+ N     + +R    Q D F+++  EGL    D+IV NPPY
Sbjct: 117 PLARVWGADLTDSTVALARRNVERLALGDRVFVRQGDLFAALAGEGLEEAVDMIVCNPPY 176

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I +  ++     +   +PR + DGG  G+S H R I + V+  L   G    E G  Q  
Sbjct: 177 ISTSRLESDSAHLLASEPREAFDGGPYGISIHQRLIREAVA-FLKPGGWLLFEFGEGQDR 235

Query: 234 DVVRIFESRKLFLVNAFK-DYGGNDRV 259
               +    K +   +F  D  G  RV
Sbjct: 236 QTAALLARTKAYDAVSFATDAAGKPRV 262


>gi|254358090|ref|ZP_04974363.1| methyltransferase, HemK family protein [Burkholderia mallei
           2002721280]
 gi|148027217|gb|EDK85238.1| methyltransferase, HemK family protein [Burkholderia mallei
           2002721280]
          Length = 307

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 14/154 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+L TG+G  CLA+L    F       VD+S  AL +AK N    G+ ER      D +
Sbjct: 133 VLELCTGSG--CLAILAALAFPNASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLY 190

Query: 159 SSVEGL--------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           + +           +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+   R I 
Sbjct: 191 APLPQFKWIDPAQRYDVIIANPPYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRII 249

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               R L  DG+  VEIG N++ +V   F   +L
Sbjct: 250 GEARRWLQDDGVLVVEIG-NERANVEAAFGGLEL 282


>gi|152996265|ref|YP_001341100.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Marinomonas sp. MWYL1]
 gi|150837189|gb|ABR71165.1| modification methylase, HemK family [Marinomonas sp. MWYL1]
          Length = 304

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           + ++  L     R  K E +  +LG   F  +   ++ DT  PR     L++S     L 
Sbjct: 69  NEKKHILKLVQTRITKREPLPYLLGEAWFMGLPFKVTKDTLIPRSPIISLLESEFTPWL- 127

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS---CKALEIAKSNAVTNGVSE 148
              K   + ILD+ TG+G + +A    +  F+   VDIS     AL++A  N V + V +
Sbjct: 128 ---KNYPLNILDMCTGSGCLGIA---AALVFEDAEVDISDISEAALDVANENIVRHQVED 181

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F  + G  +D+I+ NPPY+++        E  + +P ++L  G DGL+   
Sbjct: 182 RVHAIHSDMFKGLSGKRYDLIICNPPYVDADDFHNAPAEFHN-EPELALTSGEDGLNFTH 240

Query: 208 TIADGVSRHLNKDGLCSVEIG 228
                V+ +L  DG+   E+G
Sbjct: 241 EFLTQVAHYLQDDGILVYEVG 261


>gi|221632125|ref|YP_002521346.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159]
 gi|221156910|gb|ACM06037.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159]
          Length = 283

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 18/232 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+   LC V G+   ++    P+      +RF+    + R  + E +  + G R+FY + 
Sbjct: 26  DAEVLLCHVLGIDRAELYRRLPEQPPGTLERFW--ELVARRERGEPVAYLTGHREFYGLD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALL----KES 119
             ++ +T  PRPETE LV     ++  R+  R D  R +D+GTG GA+ ++L     K+ 
Sbjct: 84  FLVTPETLIPRPETEFLV----TWAAERLRARHDEPRCVDVGTGCGAIIVSLAVTLGKQH 139

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P    VG D S  AL++A+ N        R   +  D  S   G  D++V+N PY+    
Sbjct: 140 PAVL-VGSDRSLAALQVARVNR-ERLAPGRVHLVCGDLLSWCRGPLDLVVANLPYLRPDQ 197

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
               GL    ++P  +L    +G   Y  +   V+  L   G C VEI   Q
Sbjct: 198 WHP-GLA---WEPAEALFAPDEGFGWYARLLPQVATLLRSGGGCIVEIDPAQ 245


>gi|331004960|ref|ZP_08328371.1| Site-specific DNA-methyltransferase [gamma proteobacterium
           IMCC1989]
 gi|330421236|gb|EGG95491.1| Site-specific DNA-methyltransferase [gamma proteobacterium
           IMCC1989]
          Length = 314

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+ TG G + +A     P       DIS +AL +A+ N   + + +R   +QSD F
Sbjct: 142 LRILDMCTGCGCIGIATALHMPEALVDVSDISTEALLVAQDNIQRHKLQDRVTAIQSDVF 201

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S +    +D+IV+NPPY++   +D +  E +  +P I+L  G DGL   R +    + +L
Sbjct: 202 SGLPNSTYDLIVTNPPYVDKADIDSMPAEYQA-EPAIALGSGDDGLDITRRLLKEAASYL 260

Query: 218 NKDGLCSVEIG 228
           N +G+  VE+G
Sbjct: 261 NGNGVMIVEVG 271


>gi|68052371|sp|Q921L7|HEMK1_MOUSE RecName: Full=HemK methyltransferase family member 1
 gi|15030311|gb|AAH11431.1| HemK methyltransferase family member 1 [Mus musculus]
 gi|19354454|gb|AAH24428.1| HemK methyltransferase family member 1 [Mus musculus]
 gi|148689235|gb|EDL21182.1| HemK methyltransferase family member 1, isoform CRA_a [Mus
           musculus]
          Length = 340

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 23/233 (9%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102
           L+   +  ILG  DF  + L +    F PRPETE LV+  L     R   +  +D   IL
Sbjct: 106 LQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLEEVARRPHAVRAQDGPLIL 165

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++G G+GA+ L+LL + P  + V VD    A+ +   NA    + +R   +  D  S  E
Sbjct: 166 EVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENARRLQLQDRIRIICLDITS--E 223

Query: 163 GL---------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIA 210
           G           D++VSNPPYI    ++ L  E+  ++  ++LDGG +G+   +H  T+A
Sbjct: 224 GCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLA 283

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
             +   LN  G   +E+       V    +S     L LV   +D+ G  R L
Sbjct: 284 PQL---LNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 333


>gi|84387710|ref|ZP_00990726.1| putative adenine-specific methylase [Vibrio splendidus 12B01]
 gi|84377393|gb|EAP94260.1| putative adenine-specific methylase [Vibrio splendidus 12B01]
          Length = 310

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 NYLTDDGILICEVG 263


>gi|256825642|ref|YP_003149602.1| methylase of HemK family [Kytococcus sedentarius DSM 20547]
 gi|256689035|gb|ACV06837.1| putative methylase of HemK family [Kytococcus sedentarius DSM
           20547]
          Length = 308

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 104/251 (41%), Gaps = 28/251 (11%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           DD +R      + R    E +  + G   F  + L +    F PRPETELLV+ A    L
Sbjct: 57  DDPRRERFEAGVQRREAREPLQHVTGTAWFAGLGLEVGPGVFVPRPETELLVELAAERVL 116

Query: 91  -------PRIEKRDVVRILDLGTGTGAVCLALLKE----------SPFFKGVGVDISCKA 133
                  P  +    V ++DL TG+GAV L L +            P      V+   +A
Sbjct: 117 ALAGGAGPEAQ----VEVVDLCTGSGAVVLGLARRLADRAEAGQAVPTATLRAVEQDPRA 172

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            E A+ N    GV+   D   SD    F   EGL DV+VSNPPY+     + L  E R+ 
Sbjct: 173 AEYAERNIEAVGVT--VDLRVSDAREEFVDREGLVDVVVSNPPYVPEG-AEPLEPEAREH 229

Query: 191 DPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           DPR +L GG  DGL     +A      L   G   +E   +Q   + R  E      +  
Sbjct: 230 DPRQALYGGSADGLVLPVELARHARVLLRPGGWLLMEHDDSQGESLPRALEEIGFDQLAD 289

Query: 250 FKDYGGNDRVL 260
             D  G  RV+
Sbjct: 290 HLDLAGRPRVV 300


>gi|157363844|ref|YP_001470611.1| HemK family modification methylase [Thermotoga lettingae TMO]
 gi|157314448|gb|ABV33547.1| modification methylase, HemK family [Thermotoga lettingae TMO]
          Length = 272

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 94/191 (49%), Gaps = 15/191 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I G   FY + L++    F PR ETE+LVD AL      I K  +  +LD+GTG+GA
Sbjct: 69  LQYITGKCYFYGLELSVEEGVFIPRVETEVLVDIALDI----IGKNKLSTVLDIGTGSGA 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---V 167
           + LA+   +   K    DIS KAL  A  NA        F   +  + + V+ + +   +
Sbjct: 125 IALAIALNTN-CKVYASDISKKALLTAMKNAADYAAKIEF--FRGAFLTPVKHIINEIQL 181

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI   +   L  +V   +P  +L  G DGL  YR I       L K+ +  +E 
Sbjct: 182 IVSNPPYIP--VSSKLPKDVMH-EPHEALFAGNDGLDFYRQIFS--EPDLLKNKILIMEF 236

Query: 228 GYNQKVDVVRI 238
             +QK ++ +I
Sbjct: 237 SPDQKEEIQKI 247


>gi|90416051|ref|ZP_01223984.1| probable DNA methylase [marine gamma proteobacterium HTCC2207]
 gi|90332425|gb|EAS47622.1| probable DNA methylase [marine gamma proteobacterium HTCC2207]
          Length = 314

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG+G + +A        + V  DIS +AL++  +N   + +  R   ++SD F 
Sbjct: 144 RVLDLCTGSGCIGIACAYAFEEAEVVLSDISPEALQVTAANIAQHKLGYRVSAVESDLFQ 203

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + G  F +IVSNPPY+++     +  E +  +P I+L  G DGL   R +    + HL 
Sbjct: 204 QMSGEQFQLIVSNPPYVDAEDYASMPDEYQH-EPEIALASGSDGLDFTRRLLREAADHLT 262

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++G+  VE+G N  V + R F S   FL   F +  G+  V L  R
Sbjct: 263 EEGVLVVEVG-NSWVALERDFPSVP-FLWLEFSE--GDGGVFLLTR 304


>gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3]
 gi|90309750|gb|EAS37916.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3]
          Length = 302

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 2/133 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+  + +A     P      VDIS  AL++A+ N   +GV ++   + SD FS
Sbjct: 135 RILDLCTGSACIAIACAYAFPDAYVDAVDISEDALDVAEINIQGHGVEQQVIPMLSDLFS 194

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +E   +D+IVSNPPY+++  +  L  E +  +P + L  G DGL   R +    +  LN
Sbjct: 195 GIENEKYDLIVSNPPYVDNEDMQNLPAEFK-HEPELGLASGFDGLDLVRKMLAQAADMLN 253

Query: 219 KDGLCSVEIGYNQ 231
            +GL  VE+G +Q
Sbjct: 254 DNGLLFVEVGNSQ 266


>gi|316932711|ref|YP_004107693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris DX-1]
 gi|315600425|gb|ADU42960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris DX-1]
          Length = 337

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F       VD+S  AL +A  N   + + +R      
Sbjct: 172 VERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHQLDDRVSLYHG 229

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+I+SNPPY+++  +  L  E R  +P ++ DGG DGL+  R I     
Sbjct: 230 DLFGPLGDERYDLIISNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILTEAK 288

Query: 215 RHLNKDGLCSVEIG 228
            HL  DG    E+G
Sbjct: 289 NHLTPDGGLLCEVG 302


>gi|167975332|ref|ZP_02557609.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|168362409|ref|ZP_02695588.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|195867397|ref|ZP_03079401.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273462|ref|ZP_03205998.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550717|ref|ZP_03771666.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|171903368|gb|EDT49657.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|195659907|gb|EDX53287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660873|gb|EDX54126.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249982|gb|EDY74762.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379871|gb|EEH02233.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 290

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 11/222 (4%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +  + + RILG+  F   R  +  + F  R ETELLVD  +   + +     +  ++D+ 
Sbjct: 65  INEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVD--VINKIIKQSTHQIKSVIDVC 122

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVE 162
            G+G + L++           +DIS  A+  +K NA  +   G++    ++Q  +F   +
Sbjct: 123 CGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIEGINYLHKSMQK-YFLHTK 181

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYRTIADGVSRHLNKD 220
             FD+I+ NPPYI+S     L  +V D+DP  +L      DG+S Y  I + +S   NK 
Sbjct: 182 KRFDLIICNPPYIKSDYQ--LDKQVLDYDPLNALVDFEHKDGISFYLFIINNISLICNKK 239

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
                EIGY+QK  +  + +  +  +   F  DY    R+L+
Sbjct: 240 FTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILV 281


>gi|289178306|gb|ADC85552.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 319

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           + + R    E +  I+G   F  + L +    F PR ETEL+   A+ +    + +  + 
Sbjct: 87  HMVCRRHAREPLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEW----VTRHGIY 142

Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RI+DL  G+GA+ LAL  E P  +  GV++S +A    + N     +S  +  + +++
Sbjct: 143 SPRIVDLCAGSGALGLALATEIPGAQVWGVELSPQAAVWTRRN--ITQISRTYPDITANY 200

Query: 158 ------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                        + ++G  DV+VSNPPY+    V     EVRDFDP ++L GG
Sbjct: 201 HLEIADATCPITLAHLDGTVDVVVSNPPYVPQSQVP-QQPEVRDFDPSLALYGG 253


>gi|156975384|ref|YP_001446291.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio harveyi ATCC BAA-1116]
 gi|156526978|gb|ABU72064.1| hypothetical protein VIBHAR_03115 [Vibrio harveyi ATCC BAA-1116]
          Length = 310

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLSKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILVCEVG 263


>gi|84494538|ref|ZP_00993657.1| putative methylase [Janibacter sp. HTCC2649]
 gi|84384031|gb|EAP99911.1| putative methylase [Janibacter sp. HTCC2649]
          Length = 285

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 22/229 (9%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNA--------IVRSLKHESIHRILGWRDFYNVRLTLS 68
           L++H + VD   V   R+R  L  +        +        +  + G   F  + L + 
Sbjct: 30  LAAHALGVDSSEV---RRRMILGGSEPEGYAALVAERASRVPLQHLTGRAWFRGLELEVG 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              F PRPETE++   A+      +E      VV  +DL TG+GA+ LA+  E P  +  
Sbjct: 87  PGVFVPRPETEVVAGWAIDAVTECVEVGVAEPVV--IDLCTGSGAIALAIKSEVPDARVH 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
            V++S  A+  A+ N    G+    + +  D  ++ E L   DV+VSNPPYI +   + +
Sbjct: 145 AVEVSDLAVAWAQRNRERLGLD--VEIVHGDAVTAFEELAEVDVVVSNPPYIPTT-AEPI 201

Query: 184 GLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             EVRD DP ++L GG  DGL+  R +A   +  L   G+  +E   +Q
Sbjct: 202 DPEVRDHDPHVALYGGSEDGLAIPRLVAGRAAELLRSGGVLVMEHADSQ 250


>gi|153834410|ref|ZP_01987077.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01]
 gi|269961666|ref|ZP_06176028.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|148869181|gb|EDL68209.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01]
 gi|269833707|gb|EEZ87804.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 310

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILVCEVG 263


>gi|289812520|ref|ZP_06543149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 139

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 66/120 (55%), Gaps = 6/120 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E I  + G R+F+++ L +S  T  PRP+TE LV+ ALA  LP        RILD
Sbjct: 22  RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILD 76

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LGTGTGA+ LAL  E P  +   VD    A+ +A  NA    +      LQS WFS++ G
Sbjct: 77  LGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAEHLAI-RNVRILQSCWFSALSG 135


>gi|296158921|ref|ZP_06841749.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. Ch1-1]
 gi|295890796|gb|EFG70586.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. Ch1-1]
          Length = 294

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 11/175 (6%)

Query: 91  PRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P +E    V  +L+L TG+G  CLA+L    F       VD+   ALE+A  N     + 
Sbjct: 119 PYVEDPEQVSAVLELCTGSG--CLAILAAHAFPNADIDAVDLCAPALEVAMRNVTDYKLD 176

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    + D ++ + E  +DVI++NPPY+ +  +  L  E R  +P ++L GG DG+   
Sbjct: 177 DRIALFEGDLYAPLAERRYDVIITNPPYVNAASMQELPAEYR-HEPDMALAGGADGMDIV 235

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           R I       L  DG+  VEIG N++  V   F    L  ++      G+D V L
Sbjct: 236 RRIIADARNWLTDDGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFL 286


>gi|262276348|ref|ZP_06054157.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
           CIP 101886]
 gi|262220156|gb|EEY71472.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
           CIP 101886]
          Length = 310

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DL TG+G + +A     P  +   VDIS  ALE+A+ N   +G+ ++   ++SD F 
Sbjct: 135 RIMDLCTGSGCIGIACAYAFPDAEVDLVDISSDALEVAEMNVQEHGLEQQVFPIRSDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IVSNPPY++   ++ L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 DLPKDKYDLIVSNPPYVDEEDMNALPDEFR-HEPELGLAAGRDGLKLMRRIIANAPDYLT 253

Query: 219 KDGLCSVEIG 228
           + G+   E+G
Sbjct: 254 EQGILICEVG 263


>gi|183602494|ref|ZP_02963859.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683537|ref|YP_002469920.1| methylase protein [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190568|ref|YP_002967962.1| methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195974|ref|YP_002969529.1| methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218135|gb|EDT88781.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621187|gb|ACL29344.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248960|gb|ACS45900.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250528|gb|ACS47467.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793555|gb|ADG33090.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 304

 Score = 72.8 bits (177), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 21/174 (12%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           + + R    E +  I+G   F  + L +    F PR ETEL+   A+ +    + +  + 
Sbjct: 72  HMVCRRHAREPLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEW----VTRHGIY 127

Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RI+DL  G+GA+ LAL  E P  +  GV++S +A    + N     +S  +  + +++
Sbjct: 128 SPRIVDLCAGSGALGLALATEIPGAQVWGVELSPQAAVWTRRN--ITQISRTYPDITANY 185

Query: 158 ------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                        + ++G  DV+VSNPPY+    V     EVRDFDP ++L GG
Sbjct: 186 HLEIADATCPITLAHLDGTVDVVVSNPPYVPQSQVP-QQPEVRDFDPSLALYGG 238


>gi|192289768|ref|YP_001990373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris TIE-1]
 gi|192283517|gb|ACE99897.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris TIE-1]
          Length = 340

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + R+LDL TG+G  CLA+L    F       VD+S  AL +A  N   + + +R      
Sbjct: 175 IERVLDLCTGSG--CLAILAAYAFPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHG 232

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+I++NPPY+++  +  L  E R  +P ++ DGG DGL+  R I     
Sbjct: 233 DLFDPLGDERYDLIITNPPYVDADGMASLPAECR-AEPAMAFDGGDDGLTIIRRILAEAK 291

Query: 215 RHLNKDGLCSVEIG 228
            HLN DG    E+G
Sbjct: 292 DHLNPDGGLLCEVG 305


>gi|322503822|emb|CBZ38908.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 514

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 39/167 (23%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97
           H+ +  I+G + F+   +   +    PRPETE+     +   L R E+R           
Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVS 302

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156
            +RILD+  GTG + +AL K  P      +DI  +A+ +++ NA+ NG+S  R+  ++SD
Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESD 362

Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175
            FS                            +  G +DVIVSNPPY+
Sbjct: 363 MFSCFLEGQVSGQPGDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYV 409


>gi|146104511|ref|XP_001469847.1| hypothetical protein [Leishmania infantum]
 gi|134074217|emb|CAM72959.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 514

 Score = 72.4 bits (176), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 39/167 (23%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97
           H+ +  I+G + F+   +   +    PRPETE+     +   L R E+R           
Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVS 302

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156
            +RILD+  GTG + +AL K  P      +DI  +A+ +++ NA+ NG+S  R+  ++SD
Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESD 362

Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175
            FS                            +  G +DVIVSNPPY+
Sbjct: 363 MFSCFLEGQVSGQPGDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYV 409


>gi|242240012|ref|YP_002988193.1| modification methylase, HemK family [Dickeya dadantii Ech703]
 gi|242132069|gb|ACS86371.1| modification methylase, HemK family [Dickeya dadantii Ech703]
          Length = 310

 Score = 72.4 bits (176), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 10/192 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+D+     LP   +     ILDL TG+G + +A     P  +   VDIS +A
Sbjct: 113 PRSPIGELIDNRFDSLLPHQPQH----ILDLCTGSGCIAIACAHAFPEAEVDAVDISPEA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +GV      + SD F S+  + +D+IV+NPPY++   +  L  E R  +P
Sbjct: 169 LAVTEQNIQQHGVEHSVTPICSDLFRSLPAIKYDLIVTNPPYVDEEDMFDLPQEYR-HEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            + L  G DGL   R I      +L  DG+   E+G +    +V + +      V   + 
Sbjct: 228 ELGLAAGDDGLDLVRRILACAPDYLRDDGVLICEVGNS----MVHMMDQYPDIPVTWLEF 283

Query: 253 YGGNDRVLLFCR 264
             G D V +  R
Sbjct: 284 DNGGDGVFMLTR 295


>gi|254514209|ref|ZP_05126270.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR5-3]
 gi|219676452|gb|EED32817.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR5-3]
          Length = 321

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P   K+   RILDL  G G + +A     P  + V  DI   AL +A+ N     +  R 
Sbjct: 138 PWYSKKTPTRILDLCCGGGCIGIAAAVYQPELQVVLADIDADALSLARENIARYELQSRV 197

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              QSD   ++ +  FDVI+ NPPY+++  + C+  E     PR  L  G DGL   R I
Sbjct: 198 QVRQSDLMDALGDERFDVILCNPPYVDANDLACMPAEYHCEPPR-GLGSGEDGLDLARRI 256

Query: 210 ADGVSRHLNKDGLCSVEIG 228
                +HL  +GL  +E+G
Sbjct: 257 LRNAQQHLTPEGLLFLELG 275


>gi|300789605|ref|YP_003769896.1| HemK protein [Amycolatopsis mediterranei U32]
 gi|299799119|gb|ADJ49494.1| HemK protein [Amycolatopsis mediterranei U32]
          Length = 288

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  + GW    ++ + + +  F PRPETELL++  + F    ++ R+   ++DL T
Sbjct: 67  KRIPLQYLTGWAALGDITVAVGAGVFVPRPETELLLEWGVKF----LQGREFPVVVDLCT 122

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFS 159
           G+GA+ LA+    P      VDI  +AL  A+ NA  +  +          D      F+
Sbjct: 123 GSGALALAVAHARPDAVVYAVDIDPQALAWARHNADVHADAGNTPIRLYSGDIGDPTMFA 182

Query: 160 SVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            ++GL D+++ NPPY+ E   V     EV + DP  ++     GL+  R      +R L 
Sbjct: 183 ELDGLVDLVLCNPPYVPEGTPVPP---EVAEHDPPRAVFAEESGLAVIRHAIAAGARLLR 239

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
             G  ++E        V  +  +R++   V    D  G  R
Sbjct: 240 PGGGLAIEHDDTHGSAVPALVRARRVLTGVEGHTDLTGRAR 280


>gi|323496540|ref|ZP_08101594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
 gi|323318384|gb|EGA71341.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
          Length = 310

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            + VRI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 250 DYLTDNGILICEVG 263


>gi|148976458|ref|ZP_01813164.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3]
 gi|145964281|gb|EDK29537.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3]
          Length = 310

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILICEVG 263


>gi|171463263|ref|YP_001797376.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192801|gb|ACB43762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 298

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 24/258 (9%)

Query: 19  SHQVIVDPDSVLDD--------RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           S Q+ + P   LD         +Q+   T A  R    + +  ILG      V    S  
Sbjct: 45  SKQLDLSPAEALDHLDEAITAVQQQTASTVADTRISTRKPLAYILGEAWLMGVPFFCSEQ 104

Query: 71  TFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +  PR    EL+VD +L   LP   K      LDL TG G++ + L    P       DI
Sbjct: 105 SIVPRSWIAELIVDGSLESWLPADGKA-----LDLCTGNGSLAILLALSCPDIHVSACDI 159

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLG 184
           S  AL +A  N   +G++ + + L  D + ++     + LF++I+ NPPY+ +  ++ L 
Sbjct: 160 SMPALSVAARNLDRHGLNTQVELLDGDLWDALPKPNEDNLFNLIICNPPYVNANSMNALP 219

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L GG DG+   R I      +L++ G   +EIG N+  +  + F     
Sbjct: 220 AEYH-AEPALALAGGGDGMDLIRRILAQAPDYLSERGAILLEIG-NEYENFKKAFPQIPA 277

Query: 245 FLVNAFKDYGGNDRVLLF 262
             +   K   G+++VLL 
Sbjct: 278 IWM---KVSAGDEQVLLI 292


>gi|86748298|ref|YP_484794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris HaA2]
 gi|86571326|gb|ABD05883.1| modification methylase, HemK family [Rhodopseudomonas palustris
           HaA2]
          Length = 354

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 7/135 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V R+LDL TG+G  CLA+L    F       VD+S  AL +A  N   + + +R      
Sbjct: 188 VARVLDLCTGSG--CLAILAARSFPNAAVDAVDLSEDALAVATRNVADHHLGDRLSLHHG 245

Query: 156 DWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           D F+ +  +  +D+I++NPPY+++  +  L  E R  +P ++ DGG DGL   R I    
Sbjct: 246 DLFAPLLQDARYDLIITNPPYVDADGMANLPAECR-AEPAMAFDGGDDGLDIIRRILAEA 304

Query: 214 SRHLNKDGLCSVEIG 228
             HL  DG    E+G
Sbjct: 305 KDHLTPDGGLLCEVG 319


>gi|73541585|ref|YP_296105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia eutropha JMP134]
 gi|72118998|gb|AAZ61261.1| Modification methylase HemK [Ralstonia eutropha JMP134]
          Length = 297

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 7/172 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E   V  +L+L TG+G + +      P  +   VDIS  AL +A+ N     + +R    
Sbjct: 125 ETSQVGPVLELCTGSGCLPIIAAHVWPNAQIDAVDISPDALAVARRNVADYKMQDRIHLF 184

Query: 154 QSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + D ++ +     +DVI++NPPY+    +  L  E    +PR++L GG DG+   R I  
Sbjct: 185 EGDLYAPLPAGATYDVILTNPPYVNESSMQALPPEYLA-EPRVALAGGDDGMDVVRRIIA 243

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           G    LN  G+  VEIG N+  +V   F + ++  +       G+++V L  
Sbjct: 244 GAKARLNPGGVLVVEIG-NEHANVEAAFPNLEIVWLPV---SAGDEQVFLLT 291


>gi|312796230|ref|YP_004029152.1| ribosomal protein L3P methyltransferase [Burkholderia rhizoxinica
           HKI 454]
 gi|312168005|emb|CBW75008.1| Ribosomal protein L3P methyltransferase (EC 2.1.1.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 196

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 11/176 (6%)

Query: 91  PRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVS 147
           P I+  D +  +L+L TG+G  CLA++    F       VD+S  AL++A+ N     ++
Sbjct: 18  PWIDAPDELGAVLELCTGSG--CLAIMAADAFPGAEIDAVDLSAHALQVAQRNVDDYDLN 75

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ER    + D F  + +  +D+I++NPPY+    +  L  E R  +P ++L GG DG+   
Sbjct: 76  ERVTLFEGDLFEPLPQRQYDLILANPPYVNEASMQALPAEYR-HEPAMALAGGSDGMDIV 134

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R I       L  DG+  +EIG N++  V   F    L        + G+D V L 
Sbjct: 135 RRIIGAARDWLTDDGVLVIEIG-NERPHVEAAFGGLPL---TWLPTHAGDDSVFLL 186


>gi|56460001|ref|YP_155282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Idiomarina loihiensis L2TR]
 gi|56179011|gb|AAV81733.1| Modification methylase, HemK family [Idiomarina loihiensis L2TR]
          Length = 309

 Score = 72.0 bits (175), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G + +A     P  +   +DIS +ALE+A+ N   +G++ R   +QSD F 
Sbjct: 135 RVLDLCTGGGCIAIACAYAFPEAEVDALDISTEALEVAEFNIEQHGLTHRVTPIQSDLFD 194

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +V+   +D+IV+NPPY+++  +  L  E    +P + L  G DGL     +    S  LN
Sbjct: 195 AVKAEKYDLIVTNPPYVDAEDMTDLPPEYH-HEPELGLAAGEDGLILVDKMLMQASDLLN 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             GL   E+G +      +  ++  ++L  A     G D V L  +
Sbjct: 254 DGGLFVCEVGNSMPALAEKYPKTPFMWLEFA----NGGDGVFLLTK 295


>gi|257126616|ref|YP_003164730.1| modification methylase, HemK family [Leptotrichia buccalis
           C-1013-b]
 gi|257050555|gb|ACV39739.1| modification methylase, HemK family [Leptotrichia buccalis
           C-1013-b]
          Length = 379

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 12/221 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--------SLPRIEKRDVVRIL 102
           +  +L  ++F+  +  +      PR +TE+LV+ A+          ++     ++  +IL
Sbjct: 153 VQYLLNEQEFFGRKFYVDKGVLIPRQDTEVLVEKAIEILKNDTLKKNISEKNSKNRKKIL 212

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV 161
           D+G G+G + +++  E      +G+DIS KALE ++ N  + N  + +F  L+S+ F ++
Sbjct: 213 DIGAGSGIIGISVALEIKDSYVLGIDISEKALETSEKNKEILNVKNIKF--LKSNLFENI 270

Query: 162 E-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           E   FD+I+SNPPYI    V  +  +    +P  +L    DGL  Y  I      +L   
Sbjct: 271 EFKEFDMIISNPPYISFNEVGIMSDDTLLHEPSDALFAENDGLYFYYEICQNALDYLADS 330

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G    EIGY Q  +V  I  S     V   KD  G DRV++
Sbjct: 331 GYLLFEIGYKQGNNVAEIMTSSGFKNVEVIKDLTGLDRVVV 371


>gi|303273570|ref|XP_003056145.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462229|gb|EEH59521.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 423

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 106/243 (43%), Gaps = 52/243 (21%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVR--ILDLGTGTGAV 111
           WR+     L ++     PRPETELLVD   SA+       EK  +V    +DLGTG+GA+
Sbjct: 174 WRELV---LVVTPAVLIPRPETELLVDIIKSAIH------EKPSLVESPWVDLGTGSGAL 224

Query: 112 CLALLKESPFFKGV---------------GVDISCKALEIAKSNA-----VTNGVSERFD 151
            +++  E    K                  V++  +A  IA+ N      +T G S    
Sbjct: 225 AISIAAEISKVKHSLNPAQSSREEEVIVHAVELCPRAAAIARHNVSRYRNITGGGSGGVS 284

Query: 152 TLQSDWFSSVE----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI- 200
             +  WF  +E          G F  IVSNPPYI S     L  EVR  +P I+L+GG  
Sbjct: 285 VYEGSWFRPLEVRGLTATVGCGTFAGIVSNPPYIPSKDFLSLQPEVRCHEPWIALEGGPG 344

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            GL    ++  G + HL   G  ++E  G  Q  +V  + E   L      +D  G D++
Sbjct: 345 PGLDALISVCTGAAVHLLGGGFLALETNGGRQAHEVAELLEHMSL------QDTSGCDKM 398

Query: 260 LLF 262
            +F
Sbjct: 399 PIF 401


>gi|167856506|ref|ZP_02479219.1| hypothetical adenine-specific methylase [Haemophilus parasuis
           29755]
 gi|167852370|gb|EDS23671.1| hypothetical adenine-specific methylase [Haemophilus parasuis
           29755]
          Length = 314

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 83/156 (53%), Gaps = 4/156 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A   + P  +   VD+S  AL +A+ N   + ++ R    QSD F 
Sbjct: 143 RILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAHRVFPFQSDLFD 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I    +  L+
Sbjct: 203 DLPQDRYDLIVTNPPYVDQEDLDDMPEEFH-HEPEMALGSGVDGLDITKRILAQAADFLS 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            +G+   E+G N  V ++  F S     +  FK+ G
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPSVPFHWLE-FKNGG 295


>gi|300024654|ref|YP_003757265.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526475|gb|ADJ24944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Hyphomicrobium denitrificans ATCC 51888]
          Length = 315

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 8/157 (5%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135
            EL+    L   +P  +   V R+LDL TG+G  C+A+L    F        DIS  AL 
Sbjct: 117 AELIARDGLGSIVP--DAAQVGRVLDLCTGSG--CIAILAAEAFPNAEIHASDISDDALA 172

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A  N    G+ +R  T + D F  +  G +D+I+SNPPY+ +  V+    E +  +P++
Sbjct: 173 VAARNIRDYGLDQRVRTFKVDLFDGLPAGSYDLIISNPPYVAAAEVEAFAPEYQ-AEPKL 231

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           +  GG+DGL   + I DG    L + G   VEIG  Q
Sbjct: 232 AHLGGVDGLDLVKRILDGAGERLEEQGNLIVEIGTGQ 268


>gi|260913869|ref|ZP_05920343.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC
           43325]
 gi|260631956|gb|EEX50133.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC
           43325]
          Length = 313

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A   + P  +   VD+S  ALE+A+ N   + +  R   +QSD F+
Sbjct: 142 RILDMCTGSGCIAIACAVQFPDAEVDAVDLSPDALEVAEINIERHQLLHRVFPMQSDLFN 201

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IVSNPPY++   +  +  E   ++P ++L  G+DGL   + I      +L+
Sbjct: 202 DLAKVEYDLIVSNPPYVDEEDLADMPEEFH-YEPEMALGSGVDGLEITKRILYAAPDYLS 260

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           + G+   E+G N  V ++  +
Sbjct: 261 EKGVLVCEVG-NSMVHLIEQY 280


>gi|297560948|ref|YP_003679922.1| modification methylase, HemK family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296845396|gb|ADH67416.1| modification methylase, HemK family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 258

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 18/199 (9%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +LGW  F  +R+ +    F PRP TE L   A A   P          +DL  G+G
Sbjct: 53  PLEHVLGWALFCGLRVRVDEGVFVPRPRTEFLARQARALLTPGAVA------VDLCCGSG 106

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDV 167
           A+   L            DI   ++  A+ N   + V   + +D L  D    + G   V
Sbjct: 107 ALGAVLAHTRADITLHAADIDAASVACARRNLPGHRVHRGDLYDALPPD----LRGRVQV 162

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +V+N PY+ +  +  L  E R  + R +LDGG DGL   R +A    R L   G   VE+
Sbjct: 163 LVANVPYVPTDRIALLPAEARVHEDRRALDGGQDGLDLLRRVAADAGRWLAPGGRVLVEV 222

Query: 228 GYNQKVDVVRIFESRKLFL 246
           G  Q      +  +R+ F+
Sbjct: 223 GQEQ------VLAAREAFV 235


>gi|293395104|ref|ZP_06639390.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM
           4582]
 gi|291422281|gb|EFE95524.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM
           4582]
          Length = 370

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 12/159 (7%)

Query: 74  PR-PETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           PR P  EL+ D  SAL    PR        ILD+ TG+G + +A     P  +   VDIS
Sbjct: 173 PRSPIGELINDRFSALIPHPPR-------HILDMCTGSGCIAIACGYAFPEAEVDAVDIS 225

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            + L + + N   +GV  +   ++SD F  V  + +D+IV+NPPY+++  +  L  E R 
Sbjct: 226 SEVLAVTERNIQAHGVEHQVIPIRSDLFREVPPIQYDLIVTNPPYVDAEDMSDLPQEFR- 284

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           F+P + L  G DGL   R I       L+ DG+   E+G
Sbjct: 285 FEPELGLAAGSDGLKLVRRILACAPDFLSDDGVLICEVG 323


>gi|238753805|ref|ZP_04615166.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC
           29473]
 gi|238708041|gb|EEQ00398.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC
           29473]
          Length = 314

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +GV  +   ++SD F 
Sbjct: 139 HILDMCTGSGCIAIACAYAFPEAEVDAVDISADVLAVTEHNIQQHGVEHQVTPIRSDLFR 198

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY++   +  L  E R F+P + L  G DGL+  R I       L 
Sbjct: 199 DLPPIKYDLIVTNPPYVDEEDMSDLPQEFR-FEPELGLAAGFDGLTLARRILACAPDFLQ 257

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 258 DDGVLICEVG 267


>gi|210135233|ref|YP_002301672.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori P12]
 gi|210133201|gb|ACJ08192.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori P12]
          Length = 276

 Score = 72.0 bits (175), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +LG  DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEVRFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+G V ++L  E+P       DIS KALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPKLCIYASDISPKALEVALKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDG---LSHY 206
              Q+  +  +  + +++VSNPPY    I     LE     +P  +L GG+ G   L   
Sbjct: 165 FLKQTHLWDHMP-MIEMLVSNPPY----IAKGYPLEKSVLKEPHEALFGGVKGDEILKEI 219

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +A G+     K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 220 VFLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|271966754|ref|YP_003340950.1| HemK family modification methylase [Streptosporangium roseum DSM
           43021]
 gi|270509929|gb|ACZ88207.1| HemK family modification methylase [Streptosporangium roseum DSM
           43021]
          Length = 293

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 11/204 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL---------AF 88
           L   + R +    +  +LGW +F  +R+T+    F PR  TE L   A+         A 
Sbjct: 52  LAAMVDRRVAGLPLEHVLGWAEFCGLRITVDPGVFVPRRRTEFLAHQAVAVARQAADQAD 111

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
              R+  R VV  +DL  G+GAV   L+      +   VDI    +  A  N    G   
Sbjct: 112 RAGRVRPRTVV--VDLCCGSGAVGATLIAALDGVELHAVDIDPAEVRCAHRNVAAAGGQV 169

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               L     +++ G  DV+V+  PY+ +  +  L  E R  +PR++LDGG DGL   R 
Sbjct: 170 YEGDLYEPLPATLRGRVDVLVACAPYVPTEAIGLLPPEARIHEPRVALDGGADGLDVVRR 229

Query: 209 IADGVSRHLNKDGLCSVEIGYNQK 232
           +       L  DG   VE    Q 
Sbjct: 230 VIAEAPLWLAPDGSLLVETSERQA 253


>gi|108800850|ref|YP_641047.1| HemK family modification methylase [Mycobacterium sp. MCS]
 gi|119869990|ref|YP_939942.1| HemK family modification methylase [Mycobacterium sp. KMS]
 gi|126436448|ref|YP_001072139.1| HemK family modification methylase [Mycobacterium sp. JLS]
 gi|108771269|gb|ABG09991.1| modification methylase, HemK family [Mycobacterium sp. MCS]
 gi|119696079|gb|ABL93152.1| modification methylase, HemK family [Mycobacterium sp. KMS]
 gi|126236248|gb|ABN99648.1| modification methylase, HemK family [Mycobacterium sp. JLS]
          Length = 303

 Score = 71.6 bits (174), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 8/181 (4%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K   +  + G   F  V++++    F PRPETE L +  +  +LP     D   I+DL T
Sbjct: 69  KRIPLQHLTGTAAFGPVQVSVGPGVFIPRPETEALFEWVVRQALP-----DEPLIVDLCT 123

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165
           G+GA+ LA+    P  + + V+ S  AL  A+ N   +GV     D   +D    ++G  
Sbjct: 124 GSGALALAIATALPKARVIAVENSADALGYARRNLAGSGVELLDADVTAADLRPDLDGAV 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D++V+NPPYI       L  EV + DP  +L GG DG+     I     R L   G  +V
Sbjct: 184 DLVVANPPYIPEGA--ALDPEVAEHDPPQALFGGPDGMVVIDAIVGLAQRWLRSGGRVAV 241

Query: 226 E 226
           E
Sbjct: 242 E 242


>gi|294675035|ref|YP_003575651.1| modification methylase, HemK family [Prevotella ruminicola 23]
 gi|294472149|gb|ADE81538.1| modification methylase, HemK family [Prevotella ruminicola 23]
          Length = 291

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 95/217 (43%), Gaps = 5/217 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS+  +     + L    +  L   + R  K E +  +LG  DF   +  ++     PR
Sbjct: 37  GLSTADIYCGKVTQLSANDQAELEKIMQRLEKAEPVQYVLGVADFCGRQFYVAPGVLIPR 96

Query: 76  PET-ELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           PET EL       F     E +  ++   +LD+GTG+G + + L  + P  K    DIS 
Sbjct: 97  PETAELCHLIGEEFKGKLAEDKGKLKGCSVLDIGTGSGCIAITLALDIPDSKVTAWDISD 156

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +AL IA+ NA   G   +F+   +    +    +DVIVSNPPYI     D +   V  ++
Sbjct: 157 EALAIARHNAQALGADVKFEKHDALALETEADRWDVIVSNPPYICRKEADEMEENVLKYE 216

Query: 192 PRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           P  +L     D L  YR I       L + G    EI
Sbjct: 217 PDTALFVPDDDPLLFYRHIMHYAKLALKQGGRLYYEI 253


>gi|257465494|ref|ZP_05629865.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor 202]
 gi|257451154|gb|EEV25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor 202]
          Length = 315

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A     P  +   VD+S  AL++A+ N   + +S R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAVAFPEAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFN 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E   F+P ++L  G DGL+  + I    + +L+
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPEEFH-FEPELALGSGEDGLNITKRILAQAADYLS 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  V ++  + S
Sbjct: 262 DNGVLVCEVG-NSMVHLMEQYPS 283


>gi|238751946|ref|ZP_04613431.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC
           43380]
 gi|238709780|gb|EEQ02013.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC
           43380]
          Length = 310

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +D L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMDDLPQEFR-FEPELGLAAGTDGLKLARRILACAPDFLK 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|322815425|gb|EFZ24082.1| hypothetical protein TCSYLVIO_9800 [Trypanosoma cruzi]
          Length = 420

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 32/206 (15%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +  S     PRPETE+     +   L
Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCSPPLLCPRPETEMWTHWFVQRHL 199

Query: 91  PR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            R   +++ ++R+LD+  GTG V +A+    P  + V VD+  +A+++++ NA  NG+  
Sbjct: 200 SRATTDEKSLLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259

Query: 148 ERFDTLQSDWF-------------SSVEGL---------------FDVIVSNPPYIESVI 179
            R+  ++SD F              S EG+               FD+IVSNPPY+    
Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSRGKSKEGMSENKKAQIADLHVGSFDIIVSNPPYVLPEQ 319

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSH 205
              L   ++ ++ +I+L G     +H
Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENH 345


>gi|260776468|ref|ZP_05885363.1| hypothetical adenine-specific methylase yfcB [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607691|gb|EEX33956.1| hypothetical adenine-specific methylase yfcB [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 310

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 73/134 (54%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L ++G+   E+G
Sbjct: 250 DYLTENGILICEVG 263


>gi|37680619|ref|NP_935228.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio vulnificus YJ016]
 gi|320155710|ref|YP_004188089.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|326423914|ref|NP_760853.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio vulnificus CMCP6]
 gi|37199367|dbj|BAC95199.1| putative adenine-specific methylase [Vibrio vulnificus YJ016]
 gi|319931022|gb|ADV85886.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|319999291|gb|AAO10380.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio vulnificus CMCP6]
          Length = 310

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            + VRI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++S
Sbjct: 131 EEPVRIMDLCTGSGCIAIACAHAFPEAEVDAIDISVDALAVAEQNIQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IV+NPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEQYNIIVTNPPYVDEEDMNSLPTEFTH-EPALGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L + G+   E+G
Sbjct: 250 DYLTEKGILVCEVG 263


>gi|269219854|ref|ZP_06163708.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210759|gb|EEZ77099.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 306

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 104/258 (40%), Gaps = 30/258 (11%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D   D+R  F  + A+ R    E +  I G   F  + L      F  RPETE +   A+
Sbjct: 46  DPTPDERAMF--SRAVARRAAREPLQHITGRMYFRWLELVSRPGAFIVRPETEAVAQDAV 103

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +    ++ +  R+LDL TG+GA+ LA+  E P    VGVD S +AL++A+ N    G 
Sbjct: 104 DEARRIADRGERPRVLDLCTGSGAIALAVATEVPGSAVVGVDASAEALQVARENNAAYGG 163

Query: 147 SERFDTLQSDWFS----------------------SVEGLFDVIVSNPPYIESVIVDC-L 183
              F    +  FS                         G FDV+V+NPPY+ +    C L
Sbjct: 164 PVEFVLADALEFSCAHEPDVREDPGASESGALGSGGARGKFDVVVANPPYVPA---RCEL 220

Query: 184 GLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             EV   DP  +L  GG DGL     +    +  L   GL  +E    Q   + R+    
Sbjct: 221 SPEVL-ADPAAALWGGGEDGLDMPNALVKKAAGLLKPGGLLVMEHAEEQAEPLRRLALKT 279

Query: 243 KLFLVNAFKDYGGNDRVL 260
                    D  G  R L
Sbjct: 280 GFVKAETRADLAGRPRWL 297


>gi|254506930|ref|ZP_05119069.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus 16]
 gi|219550215|gb|EED27201.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus 16]
          Length = 310

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD F 
Sbjct: 135 RIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNIQDHGMEQQVFPIRSDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I      +L 
Sbjct: 195 DLPKEQYNLIVSNPPYVDEEDMNSLPEEFT-HEPELGLAAGTDGLKLVRRILANAPDYLT 253

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 254 ENGILICEVG 263


>gi|304390025|ref|ZP_07371979.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326507|gb|EFL93751.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 290

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 16/237 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QRFF    + +      +  ++G   F ++ L      F  RPETE +   A+  +   +
Sbjct: 56  QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLRARPGVFVVRPETEWVAQGAIDAAADWV 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150
            +    R+LDLG G+GA+ L++  E P      VD+S  A+E+   NA   GV+ R    
Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTSVDVSEAAVELTAENARFTGVAARVLHA 173

Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                 TL++    + +   F VI +NPPY    +VD +       DP+++L  GG DGL
Sbjct: 174 DATDPQTLRNALVCAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              R      +          +E   +Q   +V+  E+  L       D  G  R L
Sbjct: 230 ERPRAFLAAAAAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|315077779|gb|EFT49830.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL053PA2]
          Length = 291

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 8/193 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+    V  +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201

Query: 184 GLEVRDFDPRISL 196
             EV + +P ++L
Sbjct: 202 PGEVTEHEPDLAL 214


>gi|294637237|ref|ZP_06715539.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella tarda ATCC 23685]
 gi|291089583|gb|EFE22144.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella tarda ATCC 23685]
          Length = 320

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS + LE+ + N   +G+ ++   ++SD F 
Sbjct: 145 HILDMCTGSGCIAIACAYAFPEAEVDAVDISGEVLEVTEHNIQQHGLEQQVTPIRSDLFR 204

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 205 ELPALRYDLIVTNPPYVDEEDMSDLPDEFR-HEPELGLAAGSDGLKLVRRILACAPDYLS 263

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 264 DDGVLICEVG 273


>gi|195091706|ref|XP_001997556.1| GH23445 [Drosophila grimshawi]
 gi|193905933|gb|EDW04800.1| GH23445 [Drosophila grimshawi]
          Length = 249

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L D +RF         L+H     I+G  DF ++ L  +   F PRPETE  V       
Sbjct: 92  LADFERFLEARCARMPLQH-----IIGEWDFMDITLKTAPTVFIPRPETEEFV----RLV 142

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +   ++ + V +L++G G+GA+ L++L   P  +   ++ S  A  +A  NA   G+ +R
Sbjct: 143 IDNYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIERSKAATALAWENAKLLGLQQR 202

Query: 150 FD----TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           F+    T+++D +   S  +  +D+I+SNPPY+++     L  EV
Sbjct: 203 FEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQYLHPEV 247


>gi|322378890|ref|ZP_08053307.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1]
 gi|322380384|ref|ZP_08054590.1| protoporphyrinogen oxidase [Helicobacter suis HS5]
 gi|321147174|gb|EFX41868.1| protoporphyrinogen oxidase [Helicobacter suis HS5]
 gi|321148700|gb|EFX43183.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1]
          Length = 269

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 17/195 (8%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE+LV  A       I+   +  ++++G G+G + ++L    P    +  DI+ +A
Sbjct: 86  PRPETEILVHQASEL----IQDYGIKNVVEVGIGSGVISVSLAMAHPKISILATDITMEA 141

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD--- 189
           LE+A  N  T  +  R +  Q+     V+     ++VSNPPY+       L   + D   
Sbjct: 142 LEVASVNISTFNLQNRINLFQTSLLEGVDIKARTLVVSNPPYV------ALDYPLEDSVR 195

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++P I+L GG  G    + + D  +    K   C  E+G+N K  +       K +  N 
Sbjct: 196 YEPEIALYGGEYGDEILKALIDQAANKRVKYLAC--EMGHNHKASLSEHL-GLKGYQANF 252

Query: 250 FKDYGGNDRVLLFCR 264
           + DY   DR  +  R
Sbjct: 253 YTDYSDLDRGFVATR 267


>gi|315654796|ref|ZP_07907701.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333]
 gi|315490757|gb|EFU80377.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333]
          Length = 290

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 16/237 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QRFF    + +      +  ++G   F ++ L      F  RPETE +   A+  +   +
Sbjct: 56  QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150
            +    R+LDLG G+GA+ L++  E P      VD+S  A+E+   NA   GV+ R    
Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTCVDVSEAAVELTAENARFTGVATRVLLA 173

Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                 TL++    + +   F VI +NPPY    +VD +       DP+++L  GG DGL
Sbjct: 174 DATDPQTLRNALVRAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGADGL 229

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              R                 +E   +Q   +V+  E+  L       D  G  R L
Sbjct: 230 ERPRAFLAAAVAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|320011146|gb|ADW05996.1| modification methylase, HemK family [Streptomyces flavogriseus ATCC
           33331]
          Length = 262

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 8/189 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R   H   H +LGW +F  +R+ +    F PR  TE LV  A A +       D   ++D
Sbjct: 49  REAGHPLEH-VLGWAEFCGLRIAVDPGVFVPRRRTEFLVRQAAALA------PDRAVVVD 101

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           L  GTGA+  AL       +    D+   A+  A+ N    G     D L +    ++ G
Sbjct: 102 LCCGTGALGRALASTLRDVELHAADVEPAAVRCARRNVGALGTVHEGD-LFTPLPRALRG 160

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             DV+++N PY+ +  V  L  E R  +P ++LDGG DGL   R +    +  L   G  
Sbjct: 161 RVDVLLANVPYVPTGDVGLLPAEARVHEPLVALDGGGDGLDVMRRVVGEAADWLAPGGSL 220

Query: 224 SVEIGYNQK 232
            VE    Q 
Sbjct: 221 LVETSERQA 229


>gi|189501489|ref|YP_001957206.1| HemK family modification methylase [Candidatus Amoebophilus
           asiaticus 5a2]
 gi|189496930|gb|ACE05477.1| modification methylase, HemK family [Candidatus Amoebophilus
           asiaticus 5a2]
          Length = 285

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 10/225 (4%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R  +HE I  ILG   F N    ++     PRPETE LV   +     +   +
Sbjct: 59  ILAEIVQRIHQHEPIQYILGEAPFMNRNFFVNPSVLIPRPETEELVQLII-----KENSK 113

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + ILD+GTG+G + + L K+    +  G+DIS  AL++A+SNA    +    + +Q++
Sbjct: 114 PGLHILDIGTGSGCIAITLAKDLSDAQVDGLDISEPALKVARSNA--QRLQANVNWIQAN 171

Query: 157 WFS-SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGV 213
                + G  +D+IVSNPPY+     + +   V  ++P  ++    +  L  Y  I    
Sbjct: 172 ILQDPLPGRKWDIIVSNPPYVCLSEKEQMQQRVLAYEPAQAIFVSDEAPLIFYEQIIQLA 231

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           S +L   G   +EI     + +      ++   +   +D  G DR
Sbjct: 232 STYLQPTGKLYLEINERFGLALASKLADKQFNNIYIEQDLQGKDR 276


>gi|50842730|ref|YP_055957.1| putative methylase [Propionibacterium acnes KPA171202]
 gi|289428592|ref|ZP_06430276.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J165]
 gi|295130811|ref|YP_003581474.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK137]
 gi|50840332|gb|AAT82999.1| putative methylase [Propionibacterium acnes KPA171202]
 gi|289158286|gb|EFD06505.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J165]
 gi|291377241|gb|ADE01096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK137]
 gi|313772061|gb|EFS38027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL074PA1]
 gi|313791909|gb|EFS40010.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA1]
 gi|313801609|gb|EFS42849.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA2]
 gi|313807752|gb|EFS46239.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA2]
 gi|313810261|gb|EFS47982.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL083PA1]
 gi|313818789|gb|EFS56503.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL046PA2]
 gi|313820561|gb|EFS58275.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA1]
 gi|313822634|gb|EFS60348.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA2]
 gi|313825433|gb|EFS63147.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL063PA1]
 gi|313830591|gb|EFS68305.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL007PA1]
 gi|313833627|gb|EFS71341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL056PA1]
 gi|313838322|gb|EFS76036.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL086PA1]
 gi|314924926|gb|EFS88757.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA3]
 gi|314960549|gb|EFT04651.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA2]
 gi|314962565|gb|EFT06665.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL082PA1]
 gi|314973592|gb|EFT17688.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL053PA1]
 gi|314975814|gb|EFT19909.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL045PA1]
 gi|314978720|gb|EFT22814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL072PA2]
 gi|314983707|gb|EFT27799.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA1]
 gi|314987888|gb|EFT31979.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA2]
 gi|314989699|gb|EFT33790.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA3]
 gi|315080406|gb|EFT52382.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL078PA1]
 gi|315084735|gb|EFT56711.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL027PA2]
 gi|315085419|gb|EFT57395.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA3]
 gi|315088523|gb|EFT60499.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL072PA1]
 gi|315095865|gb|EFT67841.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL038PA1]
 gi|315105833|gb|EFT77809.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL030PA1]
 gi|327326417|gb|EGE68207.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL096PA2]
 gi|327331708|gb|EGE73445.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL096PA3]
 gi|327443484|gb|EGE90138.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL013PA2]
 gi|327445687|gb|EGE92341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL043PA2]
 gi|327448329|gb|EGE94983.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL043PA1]
 gi|327453372|gb|EGF00027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL092PA1]
 gi|328754696|gb|EGF68312.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL020PA1]
 gi|328760892|gb|EGF74457.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL099PA1]
          Length = 291

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+    V  +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    +  
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMATSD 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|307330646|ref|ZP_07609785.1| modification methylase, HemK family [Streptomyces violaceusniger Tu
           4113]
 gi|306883707|gb|EFN14754.1| modification methylase, HemK family [Streptomyces violaceusniger Tu
           4113]
          Length = 272

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 15/217 (6%)

Query: 31  DDRQRFFLTNA---------IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +D  R  L  A         + R      +  +LGW +F  +R+++ +  F PR  TE L
Sbjct: 26  EDEARLILATARTPAGLLAMVDRRAAGLPLEHVLGWAEFRGLRISVDAGVFVPRRRTEFL 85

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ A+A + P         ++DL  G+GA+  AL       +    DI   A+  A+ N 
Sbjct: 86  VEQAVALARPG------AVVVDLCCGSGALGAALASALSEVELYAADIDPVAVACARRNV 139

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G +     L     +++ G  DV+++N PY+ +  V  L  E R  + R++LDGG+D
Sbjct: 140 EPAGGTVYEGDLYEPLPAALRGRVDVLLANVPYVPTEEVGLLPPEARVHEARVALDGGVD 199

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           GL   R +  G  R L   G    E    Q    + I
Sbjct: 200 GLDVLRRVTAGAGRWLTPGGSLLFETSGRQAASAMDI 236


>gi|213964542|ref|ZP_03392742.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium amycolatum SK46]
 gi|213952735|gb|EEB64117.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium amycolatum SK46]
          Length = 314

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 23/244 (9%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D+  R  L   +VR +  E +  ILG     ++ L +    F PRPETELL   A+  + 
Sbjct: 71  DEAGRKHLAEMLVRRVAREPLQHILGTAPMMSLELQVGPGVFVPRPETELLAQWAIDRAR 130

Query: 91  PRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---- 145
             +    V  +I+DL TG+GA+ LA+    P    V V++S +A   A  N  T G    
Sbjct: 131 ELVASGVVKPKIVDLCTGSGALALAIADAVPEADVVAVELSERARAWAAKNIETYGDGRV 190

Query: 146 --VSERFDTLQ--------SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             ++      Q        +DW     G  D++VSNPPY+       +  EVR  DP  +
Sbjct: 191 RLIAGDVTDDQLIDDGGELADWV----GETDIVVSNPPYVPEDT--EVTPEVR-ADPHSA 243

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYG 254
           + GG DGL   R + + V   +   G+  +E   +   DV  + +    +  V   +D+ 
Sbjct: 244 VFGGDDGLDVIRPMMNLVDALVRSGGVIGIEHDDSSGDDVSSLLKDTWDYADVEVRRDFA 303

Query: 255 GNDR 258
           G DR
Sbjct: 304 GRDR 307


>gi|299471450|emb|CBN79402.1| similar to HemK methyltransferase family member 1 isoform 1
           [Ectocarpus siliculosus]
          Length = 332

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 104/235 (44%), Gaps = 55/235 (23%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-- 99
           ++R+++H  +  ++G  DFY + L ++  T  PRPETE LV+  L +  P +     V  
Sbjct: 29  VLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKWLRPDVMNAIAVDR 88

Query: 100 ----------------------RILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEI 136
                                 R LD+G+GTGA+ LALL E P   + V VD    A+ +
Sbjct: 89  AADAPAAGGDGADSSSSDESGMRFLDVGSGTGALGLALLGELPSGARCVAVDTQESAVRL 148

Query: 137 AKSNAVTNGVSERFDTLQS--------------------DWFSSVE----------GLFD 166
           ++ NA   G+  R+    +                       SSVE          G FD
Sbjct: 149 SRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEKGGREDLDLDGSFD 208

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            +VSNPPYI +  ++ L  +V D +  ++LDGG DGL   R I     R L K G
Sbjct: 209 FVVSNPPYIPTRDMEGLPRDVADHEDSVALDGGEDGLDVVRDIVRLCPRLLRKGG 263


>gi|227542609|ref|ZP_03972658.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181807|gb|EEI62779.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 285

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 88/219 (40%), Gaps = 13/219 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  ILG   F  + L +    F PRPETE+L D A+        K+     
Sbjct: 66  IRRRATREPLQWILGTAPFGPLDLHVGPGVFIPRPETEILADWAV--------KQHAATY 117

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSS 160
            DL TG+GA+   +    P  + V  + S +A   A+ N V N    +  DT        
Sbjct: 118 ADLCTGSGAIAAYIAHYVPAARVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALD 177

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            EG  FDV+VSNPPY+         +E    DP  ++  G DG+S    +A      L  
Sbjct: 178 PEGDGFDVVVSNPPYVPEAAEVSPEVEA---DPHDAVFAGEDGMSCIPQLAHTAFALLKP 234

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            G   VE     +  V    +      +   +D+ G  R
Sbjct: 235 GGCFGVEHDDATQPAVCMSLQEAGFTHIEPMQDFAGKPR 273


>gi|86146091|ref|ZP_01064417.1| putative adenine-specific methylase [Vibrio sp. MED222]
 gi|218708869|ref|YP_002416490.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio splendidus LGP32]
 gi|85836038|gb|EAQ54170.1| putative adenine-specific methylase [Vibrio sp. MED222]
 gi|218321888|emb|CAV17875.1| Hypothetical adenine-specific methylase [Vibrio splendidus LGP32]
          Length = 310

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+D+ TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDMCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLTDDGILICEVG 263


>gi|326441030|ref|ZP_08215764.1| putative methylase [Streptomyces clavuligerus ATCC 27064]
          Length = 289

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 5/195 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R    E +  +LGW  F   R  +    F PRP +  LV+ ALA +        
Sbjct: 27  LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERALALA-----PGA 81

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL  E    +    DI   A+  A+ N    G +     L +  
Sbjct: 82  GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 141

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              + G  DV+++N PY+ +  +  L  E R  +  I+LDGG DGL   R +A    R L
Sbjct: 142 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 201

Query: 218 NKDGLCSVEIGYNQK 232
              G    E G  Q 
Sbjct: 202 APGGSLLFETGERQS 216


>gi|260890430|ref|ZP_05901693.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii
           F0254]
 gi|260860050|gb|EEX74550.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii
           F0254]
          Length = 378

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 10/220 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--------RIL 102
           +  +L  ++FY  +  +      PR +TE+LV+  +      I K   +        +IL
Sbjct: 156 VQYLLNEQEFYGRKFYVDRGVLIPRQDTEVLVEKMIEILKNNILKNKNLEKNLKIHPKIL 215

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G G+G + +    E      +GVDIS KALE A+ N     VS     L+S+ F ++E
Sbjct: 216 DIGVGSGIIGITAALEIKDSYVLGVDISEKALETAEKNKELLKVS-NIKFLKSNLFENIE 274

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD+IVSNPPYI       +  +    +P  +L    DGL  Y  I      +L   G
Sbjct: 275 FKQFDMIVSNPPYISLNEAGIMSDDTLLHEPSEALFAENDGLYFYYEICQKALDYLADFG 334

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               EIGY Q  +V  I  S     V   KD  G DRV++
Sbjct: 335 YLLFEIGYKQGKNVAEIMTSSGFKNVEVIKDLAGLDRVVV 374


>gi|119476715|ref|ZP_01617025.1| probable DNA methylase [marine gamma proteobacterium HTCC2143]
 gi|119449971|gb|EAW31207.1| probable DNA methylase [marine gamma proteobacterium HTCC2143]
          Length = 311

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P ++ ++V  ILDL +G G + +A        +   VD+S  AL++A  N     +  R 
Sbjct: 125 PWLQHQEVFEILDLCSGGGCIGIACAHYFEEAQVSLVDLSAPALQVAVENIQRFELPHRV 184

Query: 151 DTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             +QSD F+ + G  + +IV+NPPY++ V +  +  E    +P+++L  G DGL   R I
Sbjct: 185 SVIQSDLFTGLVGRTYQLIVANPPYVDGVDLQTMPAEYHH-EPQLALGSGDDGLDITRRI 243

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               + +L ++G+  VE+G N  V + + F
Sbjct: 244 LQQSADYLTEEGILVVEVG-NSGVALEQAF 272


>gi|323491461|ref|ZP_08096645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
 gi|323314330|gb|EGA67410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 250 DYLTDNGILICEVG 263


>gi|254389027|ref|ZP_05004257.1| modification methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294812516|ref|ZP_06771159.1| Putative methylase [Streptomyces clavuligerus ATCC 27064]
 gi|197702744|gb|EDY48556.1| modification methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294325115|gb|EFG06758.1| Putative methylase [Streptomyces clavuligerus ATCC 27064]
          Length = 314

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 5/195 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R    E +  +LGW  F   R  +    F PRP +  LV+ ALA +        
Sbjct: 52  LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERALALA-----PGA 106

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL  E    +    DI   A+  A+ N    G +     L +  
Sbjct: 107 GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 166

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              + G  DV+++N PY+ +  +  L  E R  +  I+LDGG DGL   R +A    R L
Sbjct: 167 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 226

Query: 218 NKDGLCSVEIGYNQK 232
              G    E G  Q 
Sbjct: 227 APGGSLLFETGERQS 241


>gi|302865840|ref|YP_003834477.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC
           27029]
 gi|302568699|gb|ADL44901.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC
           27029]
          Length = 263

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F   R+ +    F PR  T LLVD+A A +        
Sbjct: 42  LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRTALLVDAAAALAG------P 95

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDL  G+GA  + L +          DI   A+  A+ N    GV       Q D 
Sbjct: 96  APVVLDLCCGSGAAAVVLHERLTPRWLAAADIDPVAVACARRNLEPLGVP----VYQGDL 151

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F ++     G  D++V+N PY+ +  V  L  E R ++  ++LDGG DGL+  R +A G 
Sbjct: 152 FDALPAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASGA 211

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  L   G   VE    Q  ++   F +  L
Sbjct: 212 AEWLAPGGHVVVESSVAQAPELCAAFTAVGL 242


>gi|240949667|ref|ZP_04754002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor NM305]
 gi|240295925|gb|EER46601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor NM305]
          Length = 315

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 81/143 (56%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A     P  +   VD+S  AL++A+ N   + +S R   + SD F+
Sbjct: 143 RILDMCTGSGCIAIACAVAFPDAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFN 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E   F+P ++L  G DGL+  + I    + +L+
Sbjct: 203 DIPQDKYDLIVTNPPYVDQEDLDDMPEEFH-FEPELALGSGEDGLNITKRILAQAADYLS 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  + ++  + S
Sbjct: 262 DNGVLVCEVG-NSMIHLMEQYPS 283


>gi|163801892|ref|ZP_02195789.1| N5-glutamine methyltransferase [Vibrio sp. AND4]
 gi|159174400|gb|EDP59204.1| N5-glutamine methyltransferase [Vibrio sp. AND4]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLAKEQYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 250 DYLTDNGILVCEVG 263


>gi|86149778|ref|ZP_01068007.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85839596|gb|EAQ56856.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni CF93-6]
          Length = 271

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ +   +   
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    DI
Sbjct: 82  ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247
             +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+V
Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246

Query: 248 NAFKDYGGNDRVLL 261
           + FKD  G +R  +
Sbjct: 247 DFFKDEQGYNRAFI 260


>gi|88596994|ref|ZP_01100230.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562361|ref|YP_002344140.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|88190683|gb|EAQ94656.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360067|emb|CAL34859.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 271

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ +   +   
Sbjct: 25  LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    DI
Sbjct: 82  ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 136 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247
             +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+V
Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246

Query: 248 NAFKDYGGNDRVLL 261
           + FKD  G +R  +
Sbjct: 247 DFFKDEQGYNRAFI 260


>gi|57237024|ref|YP_178826.1| HemK family modification methylase [Campylobacter jejuni RM1221]
 gi|57165828|gb|AAW34607.1| modification methylase, HemK family [Campylobacter jejuni RM1221]
 gi|315058185|gb|ADT72514.1| Methylase, HemK [Campylobacter jejuni subsp. jejuni S3]
          Length = 271

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D    F     ++R  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYF----KLIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    D
Sbjct: 81  GILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187
           I+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    + 
Sbjct: 135 INLKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+
Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245

Query: 247 VNAFKDYGGNDRVLL 261
           V+ FKD  G +R  +
Sbjct: 246 VDFFKDEQGYNRAFV 260


>gi|241662926|ref|YP_002981286.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia pickettii 12D]
 gi|240864953|gb|ACS62614.1| modification methylase, HemK family [Ralstonia pickettii 12D]
          Length = 300

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 91  PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I++ D    +L+L TG+G + +    + P      VD+S  AL +A  N     + +R
Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNSTIDAVDLSPDALVVANRNVDEYHLQDR 185

Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               + D ++ +     +DVI++NPPY+    +  L  E R  +P ++L GG DG+   R
Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     RHL   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297


>gi|313665081|ref|YP_004046952.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma leachii PG50]
 gi|312949565|gb|ADR24161.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma leachii PG50]
          Length = 282

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 33/243 (13%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +   +   ++ + D VL  +Q + L        K   +  IL  + FY+   
Sbjct: 23  DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLDQIWKLLEKKYPLAYILKNKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFF 122
            ++ D   PR E+EL++D    F    I+  + + I+DL TG+G +   C  L K++   
Sbjct: 83  FINKDVLIPRSESELIIDYVSEF----IKNNNNLLIVDLCTGSGCLGISCALLNKQN--- 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSN 171
           K +  DIS KAL++A  N       +RF+   +   + + G F           +VI+SN
Sbjct: 136 KVILTDISYKALKVANKNI------KRFNLKNT---TCLSGDFINVLIKDNIKANVIISN 186

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGY 229
           PPYI+ +    L   V +++P I+L     GL  Y  +   + +   +NK  L  +E G+
Sbjct: 187 PPYID-INDQNLDKNVIEYEPSIALFAPNKGLYFYEILIKNIDKIVDVNKKFLIVLEFGW 245

Query: 230 NQK 232
            QK
Sbjct: 246 LQK 248


>gi|304398259|ref|ZP_07380133.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. aB]
 gi|304354125|gb|EFM18498.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. aB]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+  +   +++D F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTGALAVAEQNIEEHGLIHQVTPIRADLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 ELPQLKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           + G+   E+G N  V ++  +
Sbjct: 254 EQGVLVCEVG-NSMVHMIEQY 273


>gi|315930593|gb|EFV09625.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 264

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ +   +   
Sbjct: 18  LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 74

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    DI
Sbjct: 75  ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 128

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 129 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 185

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247
             +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+V
Sbjct: 186 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 239

Query: 248 NAFKDYGGNDRVLL 261
           + FKD  G +R  +
Sbjct: 240 DFFKDEQGYNRAFI 253


>gi|227487968|ref|ZP_03918284.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092059|gb|EEI27371.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 285

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 13/217 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  ILG   F  + L +    F PRPETE+L D A+        K+      D
Sbjct: 68  RRATREPLQWILGTAPFGPLDLHVGPGVFIPRPETEILADWAV--------KQHAATYAD 119

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE 162
           L TG+GA+   +    P  + V  + S +A   A+ N V N    +  DT         E
Sbjct: 120 LCTGSGAIAAYIAHYVPAARVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALDPE 179

Query: 163 G-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  FDV+VSNPPY+         +E    DP  ++  G DG+S    +A      L   G
Sbjct: 180 GDGFDVVVSNPPYVPEAAEVSPEVEA---DPHDAVFAGEDGMSCIPQLAHTAFALLKPGG 236

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              VE     +  V    +      +   +D+ G  R
Sbjct: 237 CFGVEHDDATQPAVCMSLQEAGFTHIEPMQDFAGKPR 273


>gi|226304213|ref|YP_002764171.1| methyltransferase [Rhodococcus erythropolis PR4]
 gi|226183328|dbj|BAH31432.1| methyltransferase [Rhodococcus erythropolis PR4]
          Length = 264

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 16/207 (7%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E +  +LGW +F  +R+ + S  F PR  TE L   A +  +          ++D
Sbjct: 52  RRVAGEPLEPVLGWVEFCGLRIHIDSGVFVPRRRTEFLARQACSLVV------SGSVVVD 105

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           +  G+GAV   L           VD+   A+  A+ N     ++     L+ D F  +  
Sbjct: 106 MCCGSGAVGTVLQSTLDAVDLYAVDVEPAAVRCARRN-----ITPPERVLEGDLFEPLPT 160

Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
              G  DV+V+N PY+ +  +  +  E R  +P +SLDGG DGL   R I    +  L  
Sbjct: 161 ELLGRVDVVVANAPYVPTDSIRLMPPEARLHEPLVSLDGGTDGLDLQRRIIADAAPWLRP 220

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL 246
            G   VE    Q    V  F +R  FL
Sbjct: 221 GGCLLVETSTEQVEMTVETF-TRGGFL 246


>gi|304414084|ref|ZP_07395452.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
 gi|304283298|gb|EFL91694.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
          Length = 357

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 7/167 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++   A  LPR  K     ILDL TG+G + +A            VDIS + 
Sbjct: 160 PRSPIGELINKKFATLLPRTPKH----ILDLCTGSGCIAIACAHAFAQADIDAVDISEEV 215

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   + V ++   + SD F ++  + +D+IV+NPPY+++  +  L  E   F+P
Sbjct: 216 LAVTEYNIQQHAVEQQVTPILSDLFHALPPIQYDLIVTNPPYVDTEDMANLPPEFC-FEP 274

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  G DGL   R I       L  DG+   E+G N  + ++R +
Sbjct: 275 KLGLAAGEDGLELVRRILAWAPDFLQDDGVLICEVG-NSMMHLIRQY 320


>gi|296109428|ref|YP_003616377.1| methylase [Methanocaldococcus infernus ME]
 gi|295434242|gb|ADG13413.1| methylase [Methanocaldococcus infernus ME]
          Length = 191

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 21/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L    D +EP  ++ LL        L  I      R+LD+GTGTG + +A    S   
Sbjct: 1   MKLIYDKDVYEPAEDSYLL--------LKNIVDVKGKRVLDVGTGTGILAIA----SALK 48

Query: 123 KGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            G+  G+DI+ KA+E+AK NA  NGV  +F    S+ F +V+G +DVI+ NPPY+ +   
Sbjct: 49  GGIVEGIDINPKAIELAKKNAKLNGVKVKF--YLSNLFENVKGKYDVILFNPPYLPTEED 106

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D +   +       + DGG +G        D V  +L + G+  +
Sbjct: 107 DKIEGYL-----NYAFDGGKEGREILDRFIDQVPNYLKEGGVVQL 146


>gi|205355564|ref|ZP_03222335.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346798|gb|EDZ33430.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 264

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC     +   + ++ D  +D    F     ++R  K  E    I    DF+ +   +  
Sbjct: 18  LCEYLKKNKAWLFLNQDIKIDHEPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 73

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    D
Sbjct: 74  GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACD 127

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187
           I+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    + 
Sbjct: 128 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 185

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P+ +L GG  G   Y  +   +   L+K     + E GY+QK  + +I      F+
Sbjct: 186 ---EPKEALFGGEKG---YEILEKIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 238

Query: 247 VNAFKDYGGNDRVLL 261
           V+ FKD  G +R  +
Sbjct: 239 VDFFKDEQGYNRAFI 253


>gi|288926890|ref|ZP_06420790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccae D17]
 gi|288336329|gb|EFC74710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccae D17]
          Length = 280

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 12/200 (6%)

Query: 38  LTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           L   IVR L+  E +  +LG   F      +      PRPETE+L+   L     +    
Sbjct: 44  LLEEIVRRLETGEPVQYVLGEAPFCGRNFHVEPGVLIPRPETEMLL--PLICKAAKASPS 101

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----- 151
             V ILD+GTG+G + +    + P  +    DIS KAL IA++NA   G    F+     
Sbjct: 102 SPVTILDIGTGSGCIAITASLKLPEAQVTAWDISDKALHIAQNNAERLGARVTFEKQNAL 161

Query: 152 TLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYR 207
           T   D+  +       +D+IVSNPPYI       +   V D++P ++L       L  Y+
Sbjct: 162 TAAEDYIDNTFPGSRQYDIIVSNPPYIAERERKNMDPNVLDYEPTVALFVPDATPLLFYK 221

Query: 208 TIADGVSRHLNKDGLCSVEI 227
            I+    + L   G    EI
Sbjct: 222 AISHYAVKALKPSGCLLFEI 241


>gi|187928350|ref|YP_001898837.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia pickettii 12J]
 gi|187725240|gb|ACD26405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia pickettii 12J]
          Length = 300

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 91  PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I++ D    +L+L TG+G + +    + P      VD+S  AL +A  N     + +R
Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNATIDAVDLSPDALVVANRNVDEYRLQDR 185

Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               + D ++ +     +DVI++NPPY+    +  L  E R  +P ++L GG DG+   R
Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     RHL   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297


>gi|91223592|ref|ZP_01258857.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01]
 gi|262393635|ref|YP_003285489.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25]
 gi|91191678|gb|EAS77942.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01]
 gi|262337229|gb|ACY51024.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 250 DYLTDNGILICEVG 263


>gi|312884896|ref|ZP_07744586.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367373|gb|EFP94935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 310

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 5/143 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RI+D+ TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD F
Sbjct: 134 IRIMDMCTGSGCIAIACAHAFPEAEVDAIDISADALDVAEENIQDHGMEQQVFPIRSDLF 193

Query: 159 S--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +VE  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I      +
Sbjct: 194 RDLTVEK-YNLIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAPDY 251

Query: 217 LNKDGLCSVEIGYNQKVDVVRIF 239
           L   GL   E+G N  V ++  +
Sbjct: 252 LTDKGLLICEVG-NSMVHMIEQY 273


>gi|308187642|ref|YP_003931773.1| adenine-specific methylase [Pantoea vagans C9-1]
 gi|308058152|gb|ADO10324.1| putative adenine-specific methylase [Pantoea vagans C9-1]
          Length = 340

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+  +   +++D F 
Sbjct: 165 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTGALAVAEQNIEEHGLIHQVTPIRADLFR 224

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R I      +L+
Sbjct: 225 ELPQLKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 283

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           + G+   E+G N  V ++  +
Sbjct: 284 EQGVLVCEVG-NSMVHMIEQY 303


>gi|145635050|ref|ZP_01790756.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA]
 gi|145267658|gb|EDK07656.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA]
          Length = 314

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   N +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRNQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|269837928|ref|YP_003320156.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM
           20745]
 gi|269787191|gb|ACZ39334.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM
           20745]
          Length = 284

 Score = 70.9 bits (172), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 15/226 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I G R+F  +   +      PRPETE LV+ ALA+   R   R VV  
Sbjct: 66  IARRAAGEPVAYITGHREFMGLDFLVDRRVLIPRPETEYLVEWALAWLRERGGDRLVV-- 123

Query: 102 LDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            D+GTG+GA+ ++L   +  P  + VG D S  AL +A  N        R   +  D  S
Sbjct: 124 -DVGTGSGAIAVSLAAHADDPALRVVGSDRSLDALRVAAINR-DRLAPGRVALVAGDLLS 181

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                 D++++N PY+        G+    ++P ++L  G  G   Y  +   V++ L  
Sbjct: 182 WCRPGIDLVLANLPYLRPDQAHA-GIA---WEPAVALYAGETGFGLYEQLLPQVAQRLRP 237

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFL---VNAFKDYGGNDRVLLF 262
            G    EI  +Q+   + +  +R  F    +    D  G DR L+ 
Sbjct: 238 RGAVGCEIDPSQR--AIALATARSHFPTARITVRPDLAGLDRYLII 281


>gi|309782153|ref|ZP_07676883.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia sp. 5_7_47FAA]
 gi|308919219|gb|EFP64886.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia sp. 5_7_47FAA]
          Length = 300

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 8/177 (4%)

Query: 91  PRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           P I++ D    +L+L TG+G + +    + P      VD+S  AL +A  N     + +R
Sbjct: 126 PWIDQEDGPTDVLELCTGSGCLSILAALQWPNSTIDAVDLSPDALVVANRNVDEYHLQDR 185

Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               + D ++ +     +DVI++NPPY+    +  L  E R  +P ++L GG DG+   R
Sbjct: 186 IRLHEGDLYAPLPPGVHYDVILTNPPYVNEASMQALPPEYR-AEPHMALAGGNDGMDIVR 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     RHL   G+  VEIG N++ +V   F    L          G D+V L  R
Sbjct: 245 RILADAPRHLKPHGVLVVEIG-NERENVEAAFPDLDLVW---LPTSAGEDQVFLVTR 297


>gi|254228465|ref|ZP_04921891.1| methyltransferase, HemK family [Vibrio sp. Ex25]
 gi|269965657|ref|ZP_06179770.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|151939053|gb|EDN57885.1| methyltransferase, HemK family [Vibrio sp. Ex25]
 gi|269829725|gb|EEZ83961.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 292

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 113 EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 172

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 173 DLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 231

Query: 215 RHLNKDGLCSVEIG 228
            +L  +G+   E+G
Sbjct: 232 DYLTDNGILICEVG 245


>gi|296119522|ref|ZP_06838080.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967405|gb|EFG80672.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 290

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 11/227 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---SLPRIEKRDV 98
           I R ++ E +  I+G   F  + L +    F PRPETE L D A+ +   + PR ++   
Sbjct: 61  ISRRVEREPLQHIMGTAAFGPLDLEVGPGVFIPRPETESLADWAVNYLQKNHPRHQETPP 120

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           V ++DL TG+GA+   +    P  + + V++S  +L     N     V      + S   
Sbjct: 121 V-VVDLCTGSGALAAYISYYRPDARIIAVELSDASLTFTHRNLAGTSVEIVQADVTSPEL 179

Query: 156 -DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D  S+V G  D++V+NPPY+       L  EV  FDP  ++  G DG+     +   + 
Sbjct: 180 LDKLSAVVGQVDLVVTNPPYVPE--EPNLAPEVY-FDPHDAVFSGDDGMDVIHAMMPNIV 236

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             L       +E      V V        L  V+  KD GG  R +L
Sbjct: 237 ALLRPGARVGIEHDDTTSVAVQETARDAGLVNVSPLKDLGGTARFVL 283


>gi|300786119|ref|YP_003766410.1| HemK protein [Amycolatopsis mediterranei U32]
 gi|299795633|gb|ADJ46008.1| HemK protein [Amycolatopsis mediterranei U32]
          Length = 254

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 12/196 (6%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LGW +F+ +R+T+    F PR  T  LVD A++ + P     D V +LDL  G+GA
Sbjct: 48  LEHLLGWAEFHGLRVTVRPGVFVPRHRTGFLVDVAVSLAPP-----DPV-VLDLCCGSGA 101

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVI 168
           +  A     P  +    D+   A+E A+ N     +   + +D L S    S+ G  D++
Sbjct: 102 LGAAFAAARPPRELHAADVETAAVECARLNLPDAHIYQGDLYDALPS----SLRGGVDIL 157

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           ++N PY+ S  V  +  E R  +P ++LDGG DGL   R +A      L   G   +E  
Sbjct: 158 LANVPYVPSDAVSTMPPEARLHEPLVALDGGADGLDLARRVAADAPGWLAPGGTLLIESS 217

Query: 229 YNQKVDVVRIFESRKL 244
             Q   +  I  +  L
Sbjct: 218 ERQAPVLAEILAAAGL 233


>gi|261252337|ref|ZP_05944910.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP
           102891]
 gi|260935728|gb|EEX91717.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP
           102891]
          Length = 310

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++S
Sbjct: 131 EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHGMEQQVFPIRS 190

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL   R I     
Sbjct: 191 DLFRDLPKEKYNIIVSNPPYVDQEDMNSLPDEFT-HEPELGLAAGTDGLKLVRRILANAP 249

Query: 215 RHLNKDGLCSVEIG 228
            +L   G+   E+G
Sbjct: 250 DYLTDSGILICEVG 263


>gi|225013053|ref|ZP_03703468.1| methyltransferase small [Flavobacteria bacterium MS024-2A]
 gi|225002781|gb|EEG40762.1| methyltransferase small [Flavobacteria bacterium MS024-2A]
          Length = 220

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 5/163 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WF 158
           ++D GTG+G + +AL KE P F+   +D     L +AK NA+ N  S  F  LQ D    
Sbjct: 55  LIDFGTGSGCIAIALAKEQPSFEVTAIDFYSSVLNLAKQNAIKNKTSVSF--LQHDILQL 112

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHL 217
           ++++   D+IVSNPPYI       +   V +++P ++L     D L  Y +I +    +L
Sbjct: 113 NTLKLNVDIIVSNPPYIPPSEQREMKPNVLNYEPHLALFVPENDPLIFYCSILEYGLLYL 172

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             DGL   EI      ++  +  S K++ +   KD  G  R+L
Sbjct: 173 VSDGLIYFEINPRFLSEMKSLILSFKVYSILERKDIFGKLRML 215


>gi|94310361|ref|YP_583571.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cupriavidus metallidurans CH34]
 gi|93354213|gb|ABF08302.1| N5-glutamine methyltransferase [Cupriavidus metallidurans CH34]
          Length = 297

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 7/163 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+L TG+G + +      P  +   VDIS  AL +A+ N     +  R    + D ++ 
Sbjct: 132 VLELCTGSGCLPIIAAHVWPHARIDAVDISSDALAVARRNVADYKMENRITLYEGDLYAP 191

Query: 161 VE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +     +DVI++NPPY+    +  L  E    +PRI+L GG DG+   R I  G  + LN
Sbjct: 192 LPSTATYDVILTNPPYVNEQSMRDLPPEYM-AEPRIALAGGDDGMDVVRRIIAGAKKRLN 250

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             G   VEIG N++ +V   F    +  ++      G+D+V L
Sbjct: 251 PGGALVVEIG-NERENVEAAFPDLDIVWLSV---SAGDDQVFL 289


>gi|152979006|ref|YP_001344635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus succinogenes 130Z]
 gi|150840729|gb|ABR74700.1| modification methylase, HemK family [Actinobacillus succinogenes
           130Z]
          Length = 314

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+ S     L    KR    ILDL TG+G + +A     P  +   VD+S  A
Sbjct: 121 PRSPISALIQSNFNGLLSHTPKR----ILDLCTGSGCIAIACAHVFPQAEVDAVDLSFDA 176

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ N   + +  R   LQSD F ++ +  +D+IV+NPPY++   +  +  E R  +P
Sbjct: 177 LNVAEINIERHNMLHRVFPLQSDLFENLPQDQYDLIVTNPPYVDLEDLSDMPQEFR-HEP 235

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            ++L  G DGL   + I    + +L+ DG+   E+G
Sbjct: 236 ELALGSGADGLDITKRILAQAADYLSDDGILVCEVG 271


>gi|219870756|ref|YP_002475131.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parasuis SH0165]
 gi|219690960|gb|ACL32183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parasuis SH0165]
          Length = 314

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 4/156 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TG+G + +A   + P  +   VD+S  AL +A+ N   + ++ R    QSD F 
Sbjct: 143 RILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAHRVFPFQSDLFD 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   +D +  E    +P ++L  G DGL   + I    +  L+
Sbjct: 203 DLPQDRYDLIVTNPPYVDQEDLDDMPEEFH-HEPEMALGSGADGLDITKRILAQAADFLS 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            +G+   E+G N  V ++  F S     +  FK+ G
Sbjct: 262 DNGVLVCEVG-NSMVHLIEQFPSVPFHWLE-FKNGG 295


>gi|309802546|ref|ZP_07696650.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bifidobacterium dentium JCVIHMP022]
 gi|308220610|gb|EFO76918.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bifidobacterium dentium JCVIHMP022]
          Length = 298

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99
           I R  + E +  I G   F  + L +    F PRPETEL+V   + +    I +      
Sbjct: 67  IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 122

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149
           R++DL  G+GA+ LA++ E P  +   V+ S +  E  + N           + N   E 
Sbjct: 123 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEI 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
            D  Q      ++G  D++++NPPY+  S I +    EVRD+DP ++L GG  DG     
Sbjct: 183 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 240

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I     + L   GL  +E   +Q   +     +          DY G  R L+
Sbjct: 241 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294


>gi|306823421|ref|ZP_07456796.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium
           ATCC 27679]
 gi|304553128|gb|EFM41040.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium
           ATCC 27679]
          Length = 317

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99
           I R  + E +  I G   F  + L +    F PRPETEL+V   + +    I +      
Sbjct: 86  IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 141

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149
           R++DL  G+GA+ LA++ E P  +   V+ S +  E  + N           + N   E 
Sbjct: 142 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEI 201

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
            D  Q      ++G  D++++NPPY+  S I +    EVRD+DP ++L GG  DG     
Sbjct: 202 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 259

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I     + L   GL  +E   +Q   +     +          DY G  R L+
Sbjct: 260 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313


>gi|317048991|ref|YP_004116639.1| ribosomal protein L3-specific protein-(glutamine-N5)
           methyltransferase [Pantoea sp. At-9b]
 gi|316950608|gb|ADU70083.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. At-9b]
          Length = 310

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      +++D F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVAEQNIEEHGLLNHVTPIRADLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + E  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R I     ++L+
Sbjct: 195 GLPEVKYDLIVTNPPYVDAEDMDDLPGEYR-HEPELGLAAGSDGLKLVRRILACAPKYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           + G+   E+G N  V ++  +
Sbjct: 254 EQGVLICEVG-NSMVHMIEQY 273


>gi|209695606|ref|YP_002263535.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aliivibrio salmonicida LFI1238]
 gi|208009558|emb|CAQ79852.1| putative methyltransferase [Aliivibrio salmonicida LFI1238]
          Length = 314

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++SD F
Sbjct: 138 TRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALMVAEQNIQDHGMEQQVFPMRSDLF 197

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + +  ++ IVSNPPY++   ++ L  E  + +P + L  G DGL   R I      +L
Sbjct: 198 RDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLKLVRRILANAPDYL 256

Query: 218 NKDGLCSVEIG 228
             +G    E+G
Sbjct: 257 TDEGFLICEVG 267


>gi|145627817|ref|ZP_01783618.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21]
 gi|144979592|gb|EDJ89251.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21]
          Length = 314

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 3/145 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS
Sbjct: 140 QEPYHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQS 199

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + F+++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I     
Sbjct: 200 NLFTNILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAP 258

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239
            +L ++G+   E+G N  V ++  +
Sbjct: 259 NYLTENGVLVCEVG-NSMVSLIEQY 282


>gi|262201324|ref|YP_003272532.1| modification methylase, HemK family [Gordonia bronchialis DSM
           43247]
 gi|262084671|gb|ACY20639.1| modification methylase, HemK family [Gordonia bronchialis DSM
           43247]
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 12/193 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R +  E +  ILGW  F  +RL +    F PR  + L+ D+A+A  L          +L
Sbjct: 48  ARRVAGEPLEHILGWVGFAGLRLAVGPGVFVPRQRSVLVADAAVAHILTSGANPT---LL 104

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +   G   +   +    P       D    AL  A+ N     V +         FS V 
Sbjct: 105 EAFCGVAPIATVVHHRVPGASIHLTDADPVALRYARRN-----VGDDAGVYVGPGFSGVP 159

Query: 163 ----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
               G  DV+ + PPY+     + L  E R+++PR +L  G DGL H R + D  +  L+
Sbjct: 160 AHLRGYIDVVAAVPPYVPERDFEQLPHEAREYEPRAALIAGPDGLDHVRELIDDAAEWLS 219

Query: 219 KDGLCSVEIGYNQ 231
             G+  VE+ + Q
Sbjct: 220 PHGVLVVEMNHAQ 232


>gi|298346213|ref|YP_003718900.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063]
 gi|298236274|gb|ADI67406.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063]
          Length = 290

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 16/237 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QRFF    + +      +  ++G   F ++ L      F  RPETE +   A+  +   +
Sbjct: 56  QRFF--ELVGQRATRVPLQHVMGVMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150
            +    R+LDLG G+GA+ L++  E P      VD+S  A+E+   NA   GV+ R    
Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVPQSVLTCVDVSEAAVELTAENARFTGVAARVLLA 173

Query: 151 -----DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                 TL++    + +   F VI +NPPY    +VD +       DP+++L  GG DGL
Sbjct: 174 DATDPQTLRNALVRAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              R      +          +E   +Q   +V+  E+  L       D  G  R L
Sbjct: 230 ERPRAFLAAAAAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|317492688|ref|ZP_07951115.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919438|gb|EFV40770.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 310

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+ +    ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISTDVLSVTEQNIQEHGLDQSVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E R F+P + L  G DGL   R I      +L 
Sbjct: 195 ELPPLQYDLIVTNPPYVDEEDMSDLPEEFR-FEPELGLAAGSDGLKLTRRILACAPDYLT 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|283455531|ref|YP_003360095.1| hemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium dentium Bd1]
 gi|283102165|gb|ADB09271.1| hemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium dentium Bd1]
          Length = 298

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99
           I R  + E +  I G   F  + L +    F PRPETEL+V   + +    I +      
Sbjct: 67  IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 122

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149
           R++DL  G+GA+ LA++ E P  +   V+ S +  E  + N           + N   E 
Sbjct: 123 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEI 182

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
            D  Q      ++G  D++++NPPY+  S I +    EVRD+DP ++L GG  DG     
Sbjct: 183 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 240

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I     + L   GL  +E   +Q   +     +          DY G  R L+
Sbjct: 241 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294


>gi|328767396|gb|EGF77446.1| hypothetical protein BATDEDRAFT_91674 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 425

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 38/256 (14%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIEKRDVVR 100
           R + H+ +  ILG + F  + +++   T  PR ETE   L +   +       +    +R
Sbjct: 168 RCIAHKPLQYILGTQPFCGLDISVRRPTLIPRWETEEWTLSLADRIHAKTANQQLPKPLR 227

Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSN-------AVTNGVSERFDT 152
           IL+L +G+G + LAL K+       VGVDIS  A+ +A+ N        V NG S++   
Sbjct: 228 ILELCSGSGCISLALSKKLGIHAHIVGVDISLSAILLARFNQRKLMIGCVGNGSSQQLFF 287

Query: 153 LQSDWFSS-----------------VEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRI 194
            Q D F +                 V+  FD+I+SNPPYI     D L   V+ + D R 
Sbjct: 288 DQGDLFDNEFVGRLLSQMSSRLPNLVDPRFDMIISNPPYISPTEYDSLDSSVKMWEDQRA 347

Query: 195 SLDGGIDGLSHYRTIAD-------GVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLF 245
            L     G+  YR I +        +S    +  L  +  EIG  Q   V     +R+  
Sbjct: 348 LLASDEHGIRFYRRIEELADDLLLPLSHACQQYDLPRIVFEIGNTQGSAVKSQLGNRQWR 407

Query: 246 LVNAFKDYGGNDRVLL 261
             +  +D  G+DRV+L
Sbjct: 408 RTDLVQDMAGHDRVIL 423


>gi|301169942|emb|CBW29546.1| N5-glutamine methyltransferase [Haemophilus influenzae 10810]
          Length = 314

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYTFPNAEVDAVDLSVDALNVAEINISRHKLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I    S +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQASDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|270284379|ref|ZP_05966016.2| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum
           DSM 20093]
 gi|270276760|gb|EFA22614.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum
           DSM 20093]
          Length = 365

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 16/234 (6%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           T  + R    E +  I G   F  + L +    F PRPETE +V +AL +      K   
Sbjct: 130 TAMLARREAREPLQHITGHAPFRYLDLLVGPGVFVPRPETESVVQAALDWMDQHGMKSP- 188

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-----AVTNGVSERFDTL 153
            R++DL  G+GA+ L++  E P      V++   A    + N     A    ++ R+  +
Sbjct: 189 -RVVDLCAGSGAIGLSVATEVPDSCVWAVEMDATAASWTRRNLDRVGATMPDLASRYRLM 247

Query: 154 QSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
           ++D       + ++G  DV++SNPPYI    V     EVR++DP ++L GG  DG+    
Sbjct: 248 RADATCELTLADLDGTVDVVISNPPYIPEHDVP-EQTEVREYDPDMALYGGSADGMMIPE 306

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDYGGNDRVL 260
            I       L   GL  +E   +Q V   R F +   F   A  +D  G  R L
Sbjct: 307 RIISRAWALLKPGGLLVMEHDISQPVR-TRAFATAIGFSQAATHEDLTGRPRFL 359


>gi|171741091|ref|ZP_02916898.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC
           27678]
 gi|171276705|gb|EDT44366.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC
           27678]
          Length = 317

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 20/234 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--V 99
           I R  + E +  I G   F  + L +    F PRPETEL+V   + +    I +      
Sbjct: 86  IDRRARREPLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDW----ITRNGGYHA 141

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149
           R++DL  G+GA+ LA++ E P  +   V+ S +  E  + N           + N   E 
Sbjct: 142 RVVDLCAGSGAIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEI 201

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYR 207
            D  Q      ++G  D++++NPPY+  S I +    EVRD+DP ++L GG  DG     
Sbjct: 202 GDATQMPTLHQLDGTIDIVLTNPPYVPLSEIPEQ--PEVRDYDPDMALYGGSADGTLIPE 259

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            I     + L   GL  +E   +Q   +     +          DY G  R L+
Sbjct: 260 RIILRAGKLLRPGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313


>gi|300724039|ref|YP_003713354.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297630571|emb|CBJ91236.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus nematophila ATCC 19061]
          Length = 311

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A        +   VDIS  AL +A+ N   + +S R   ++SD F  
Sbjct: 136 ILDLCTGSGCIAIACAHAFSEAEVDAVDISPDALAVAEINIENHKLSHRVIPIRSDLFHD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+I +NPPY++   +     E  D +P +++  G+DGL   R I       L +
Sbjct: 196 IPSVKYDIIATNPPYVDEEDMSDFPQEY-DHEPELAMAAGVDGLDLVRRILATAPDFLAE 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           DG+   E+G N  V ++  +       +    DYG
Sbjct: 255 DGILVCEVG-NSMVHLIEQYPDVPFKWLTFEHDYG 288


>gi|255513476|gb|EET89742.1| methylase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 196

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 26/163 (15%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +V++T     + P  ++ +L           +E++   ++LDLGTGTG   +   K  
Sbjct: 16  YESVKITGCRGVYYPAEDSYMLAKI--------VERKAFGKVLDLGTGTGIQGIVAAKAG 67

Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
              +F     DIS  AL+ A+ NA  NGV  RF  L+SD FS V+G F+ I+ NPPY+ES
Sbjct: 68  CEVYFS----DISENALQCAEKNAELNGVHGRF--LRSDLFSKVKGRFNTIIFNPPYLES 121

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                 G E+R  D    LDGG+ G         GV   L  D
Sbjct: 122 ------GKEIRYAD----LDGGVLGRELIDRFLSGVKEFLLPD 154


>gi|270339624|ref|ZP_06005478.2| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM
           17361]
 gi|270334333|gb|EFA45119.1| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM
           17361]
          Length = 301

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 4/222 (1%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVV--R 100
           R  K E +  +LG  DF      +      PRPETE L    ++ ++ P    +  V  +
Sbjct: 77  RLQKGEPVQYVLGRSDFCGRTFHVEPGVLIPRPETEELCQMIVSEYTKPYCALQPPVPLQ 136

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + L       +    D+S +AL IA+ NA   G     +         
Sbjct: 137 VLDVGTGSGCIAVTLALGLHNAEITAWDVSSEALIIARDNAHRLGAKVNLEWQDMLCPPE 196

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNK 219
            +  +D++VSNPPYI +     +   V D++P  +L     D L  YR IA    R L K
Sbjct: 197 DDRQWDIMVSNPPYIANHERKAMSRNVLDYEPEQALFVPDDDPLRFYRAIATYARRTLKK 256

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G    EI      ++  +F  +        KD  G  R+ +
Sbjct: 257 GGKVFFEINPLYAEELQEMFHRQGFESTKLIKDSFGKQRIAI 298


>gi|313812712|gb|EFS50426.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL025PA1]
          Length = 291

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+       +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    +  
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|315502385|ref|YP_004081272.1| modification methylase, hemk family [Micromonospora sp. L5]
 gi|315409004|gb|ADU07121.1| modification methylase, HemK family [Micromonospora sp. L5]
          Length = 263

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 16/212 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F   R+ +    F PR  T LLVD+A A +        
Sbjct: 42  LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRTALLVDAAAALAG------P 95

Query: 98  VVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +LDL  G+GA  + L  + +P +     DI   A+  A+ N    GV       Q D
Sbjct: 96  APVVLDLCCGSGAAAVVLHDRLTPGWLAAA-DIDPVAVACARRNLEPLGVP----VYQGD 150

Query: 157 WFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            F ++     G  D++V+N PY+ +  V  L  E R ++  ++LDGG DGL+  R +A G
Sbjct: 151 LFDALPAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASG 210

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +  L   G   VE    Q  ++   F +  L
Sbjct: 211 AAEWLAPGGHVVVESSVAQAPELCAAFTAVGL 242


>gi|283953911|ref|ZP_06371440.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794516|gb|EFC33256.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414]
          Length = 269

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 17/252 (6%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ ++  +   
Sbjct: 25  LCEYLQKDKAWLFLNQDIKIDHESYFQL---IKRFKSGEPFEYIFEKVDFWGLKFKIKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ++E+L+   L       +K    +IL++G G+G + + L KE    K    DI+
Sbjct: 82  VLIPRYDSEILLFQILNLC----KKNTFNKILEIGFGSGILSIVLAKELGL-KITACDIN 136

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            KALE+A  NA  + V    +    + F  +E  +D I SNPPYI++     + ++    
Sbjct: 137 PKALELALENAKLHKVDHLINFKLCN-FKQIEENYDFIFSNPPYIKNSYPIDIWVQR--- 192

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +P+ +L GG  G   Y  + + +   ++K     + E GY+QK  + +I      F  + 
Sbjct: 193 EPKEALFGGEKG---YEILEEIIHFSIDKKVKFLACEFGYDQKEVLEKILHQNN-FTADF 248

Query: 250 FKDYGGNDRVLL 261
           FKD  G +R  +
Sbjct: 249 FKDEQGYNRAFI 260


>gi|282877096|ref|ZP_06285938.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccalis ATCC 35310]
 gi|281300778|gb|EFA93105.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccalis ATCC 35310]
          Length = 287

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 5/224 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R  + E +  +LG  +F   R  +      PRPETE L   A   S  +    +
Sbjct: 55  LEKIMQRLRQAEPVQYVLGEAEFAGRRFKVVPGVLIPRPETEELC--AWIVSEQKPTDGN 112

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTG+G + + L  + P       DIS  AL IA  NA    V   F  LQ   
Sbjct: 113 PTTILDIGTGSGCLAVTLSLDIPGAAVSAWDISQDALLIANENAKAWKVPVSF-ALQDAL 171

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215
            +  + + +D+I SNPPYI       +   V  F+P  +L     D L  Y+ IA+    
Sbjct: 172 AAPKDSMKWDIIASNPPYICPSEAAEMAQNVLKFEPSTALFVPQSDPLLFYKAIANYAIE 231

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            L  DG   VEI    +  +  + ++     +   KD  G DR+
Sbjct: 232 ALIPDGKLYVEINPLYRNQLEEMLKNVGFIDIEIRKDAFGKDRM 275


>gi|157371612|ref|YP_001479601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia proteamaculans 568]
 gi|157323376|gb|ABV42473.1| modification methylase, HemK family [Serratia proteamaculans 568]
          Length = 324

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N    GV ++   ++SD F 
Sbjct: 149 HILDMCTGSGCIAIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQQVTPIRSDLFR 208

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I      +L+
Sbjct: 209 DLPAIQYDLIVTNPPYVDAEDMSDLPEEFR-FEPELGLAAGSDGLKLVRRILACAPDYLS 267

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 268 DDGVLICEVG 277


>gi|332993999|gb|AEF04054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas sp. SN2]
          Length = 311

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K     ILD+ TG G + +AL    P  +   VDIS  ALE+A  N   + +S R   + 
Sbjct: 135 KEAPSHILDMCTGGGCIAIALAHAYPDSQVDAVDISEDALEVADINIQEHQLSHRVYPIH 194

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD F+++ G  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL     +    
Sbjct: 195 SDLFTNLTGQKYDLIVSNPPYVDAEDMADLPDEYH-HEPELALAAGDDGLELVDIMLREA 253

Query: 214 SRHLNKDGLCSVEIGYNQ 231
            ++L  +G   +E+G ++
Sbjct: 254 PQYLTDNGWLFIEVGNSE 271


>gi|188533296|ref|YP_001907093.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
 gi|188028338|emb|CAO96199.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
          Length = 292

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++SD F 
Sbjct: 117 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRSDLFR 176

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 177 ELPKTQYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 235

Query: 219 KDGLCSVEIG 228
           + G+   E+G
Sbjct: 236 EQGVLVCEVG 245


>gi|322831933|ref|YP_004211960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rahnella sp. Y9602]
 gi|321167134|gb|ADW72833.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rahnella sp. Y9602]
          Length = 310

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N  T+G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPETEVDAVDISADALAVAERNIDTHGIENWVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 ELPPLQYDLIVTNPPYVDEEDMSDLPQEYR-HEPVLGLASGSDGLKLTRRILACAPDYLT 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +G+   E+G +    +V + E          +   G D V +  +
Sbjct: 254 DNGVLICEVGNS----MVHLMEQYPQIPFTWLEFENGGDGVFMLTK 295


>gi|83319283|ref|YP_424136.1| HemK family modification methylase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283169|gb|ABC01101.1| modification methylase, HemK family [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 270

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 31/242 (12%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +   +   ++ + D VL  +Q + L        K   +  IL  + FY+   
Sbjct: 23  DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLEQISKLLEKKYPLAYILKNKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFF 122
            ++ D   PR E+EL++D    F    I+  + + I+DL TG+G +   C  L K++   
Sbjct: 83  FINKDVLIPRNESELIIDYVSEF----IKNNNDLLIVDLCTGSGCLGISCALLNKQN--- 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFS-----SVEGLFDVIVSNP 172
           K +  DIS KAL++A  N       +RF+      L  D+ S     +++   +VI+SNP
Sbjct: 136 KVILTDISYKALKVANKNI------KRFNLKNTACLSGDFISVLIKDNIKA--NVIISNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGYN 230
           PYI+ +    L   V +++P I+L     GL  Y  +   + +   +NK  L  +E G+ 
Sbjct: 188 PYID-INDQNLDKNVIEYEPSIALFAPNKGLYFYEILIKNIDQIVDVNKKFLIVLEFGWL 246

Query: 231 QK 232
           QK
Sbjct: 247 QK 248


>gi|89900828|ref|YP_523299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodoferax ferrireducens T118]
 gi|89345565|gb|ABD69768.1| modification methylase, HemK family [Rhodoferax ferrireducens T118]
          Length = 310

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 9/168 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G G++ +      P       D+S +AL +A+ N   +G+  R   ++SD F+ 
Sbjct: 136 VLDLCCGNGSLAVLAAMAYPDVTVDASDLSKEALAVARINVDKHGLGGRITLIESDGFAR 195

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRH 216
           + G +D+I+ NPPY+    +  L  E    +P ++LD    GG DG+   R +     +H
Sbjct: 196 LPGRYDLILCNPPYVNLQSMAALPPEFH-AEPALALDGNRAGGQDGMDFIRRLLREAPQH 254

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +N+D +  +EIG N++      F   +       +   G D+VLL  R
Sbjct: 255 MNEDAVLVLEIG-NEREHFEAAFPRLEAIW---LETSAGEDQVLLLTR 298


>gi|307111109|gb|EFN59344.1| hypothetical protein CHLNCDRAFT_137784 [Chlorella variabilis]
          Length = 386

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 17/185 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           WRD     L++      PRPETEL++D    A+A + P + +       DLGTG+GA+ +
Sbjct: 148 WRDIV---LSVGPGVLIPRPETELVIDFVQEAVAAA-PELARGAWA---DLGTGSGALAV 200

Query: 114 ALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            + +  P  + V  VD+S   L  A  NA   G S  F+ L++     + G    +VSNP
Sbjct: 201 GVARALPQAQQVYAVDLSPVPLSYAAFNARRLGGS-WFEPLEAAGMPQLAG----VVSNP 255

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PYI S  +  L  EV   +P ++L GG   G+     I  G +R L   G  ++E    +
Sbjct: 256 PYIRSTDMPSLQAEVGRHEPHLALHGGEGLGIDCLLPICMGAARRLQPGGFLALETAGGE 315

Query: 232 KVDVV 236
           +   +
Sbjct: 316 QAHYI 320


>gi|313764217|gb|EFS35581.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL013PA1]
 gi|313816310|gb|EFS54024.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL059PA1]
 gi|313827396|gb|EFS65110.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL063PA2]
 gi|314915695|gb|EFS79526.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA4]
 gi|314917936|gb|EFS81767.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA1]
 gi|314920319|gb|EFS84150.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA3]
 gi|314931539|gb|EFS95370.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL067PA1]
 gi|314957924|gb|EFT02027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA1]
 gi|314967572|gb|EFT11671.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA1]
 gi|315098770|gb|EFT70746.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL059PA2]
 gi|315101460|gb|EFT73436.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL046PA1]
 gi|315108752|gb|EFT80728.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL030PA2]
 gi|327329873|gb|EGE71627.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL097PA1]
 gi|327450546|gb|EGE97200.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA3]
 gi|327454115|gb|EGF00770.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL083PA2]
 gi|328753198|gb|EGF66814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL025PA2]
 gi|328753963|gb|EGF67579.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA1]
          Length = 291

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+       +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    +  
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|284925978|gb|ADC28330.1| HemK family modification methylase [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 271

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 23/255 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D    F     ++R  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYF----KLIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    D
Sbjct: 81  GILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187
           I+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    + 
Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+
Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245

Query: 247 VNAFKDYGGNDRVLL 261
           V+ FKD  G +R  +
Sbjct: 246 VDFFKDEQGYNRAFV 260


>gi|317014457|gb|ADU81893.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Helicobacter pylori Gambia94/24]
          Length = 276

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 35/239 (14%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +LG  DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEARFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+G V ++L  E+P       DIS  ALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVALKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202
              Q+  +  +  + +++VSNPPYI            RD+        +P  +L GG+ G
Sbjct: 165 FLKQTRLWDHMPTI-EMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVKG 212

Query: 203 ---LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              L     +A G+     K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 213 DEILKEIIFLAAGL-----KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|145631251|ref|ZP_01787024.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
 gi|144983178|gb|EDJ90673.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
          Length = 314

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   +D+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I    S +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQASDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|145589641|ref|YP_001156238.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145048047|gb|ABP34674.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 298

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 16/242 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE-TELLVDSA 85
           D +  D+Q      A  R    + +  ILG      V    S  +  PR    EL++D +
Sbjct: 61  DQISADQQLKASAVADTRISTRKPLAYILGEAWLMGVPFFCSEQSIVPRSWIAELIIDGS 120

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP          LDL TG G++ + L    P       DIS  AL +A  N   +G
Sbjct: 121 LEPWLPADGNA-----LDLCTGNGSLAILLALSCPDIHVSACDISMPALSVAARNVDRHG 175

Query: 146 VSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +  + +    D + ++     + +FD+I+ NPPY+ +  ++ L  E    +P ++L GG 
Sbjct: 176 LKSQIELFDGDLWDAIPEPNEDNVFDLIICNPPYVNATSMNALPAEYH-AEPALALAGGE 234

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DG+   R I      +L++ G   +EIG N+  +  + F       +       G ++VL
Sbjct: 235 DGMDLIRRIITQAPDYLSERGAILIEIG-NEYENFKKAFPQIPAIWMEV---SAGEEQVL 290

Query: 261 LF 262
           L 
Sbjct: 291 LI 292


>gi|260905207|ref|ZP_05913529.1| HemK family modification methylase [Brevibacterium linens BL2]
          Length = 267

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 10/193 (5%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R +  E + +I+GW DF   R+ ++   F PR  T LL   ++   L      +  R L
Sbjct: 49  ARRVAGEPLEQIVGWVDFAGQRIAVAPGVFVPRQRTTLLAQQSI---LAVQTAGESARFL 105

Query: 103 DLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +   G GAV   +   S  F G  +   D    AL  A++N          D L      
Sbjct: 106 EAFCGVGAVATTV---SRAFHGTQIHLGDHDETALGAARANVGAQATPHLLDCL-VGLPQ 161

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++ G FDVI + PPY+       L  E  +++P  +L GG DGL   R +       L  
Sbjct: 162 ALTGSFDVISAVPPYVPDSAAQYLPHEAAEYEPATALFGGADGLDLVRRLITESRDWLAP 221

Query: 220 DGLCSVEIGYNQK 232
            G+  +E+G  Q+
Sbjct: 222 GGVLLIELGSQQQ 234


>gi|296128764|ref|YP_003636014.1| modification methylase, HemK family [Cellulomonas flavigena DSM
           20109]
 gi|296020579|gb|ADG73815.1| modification methylase, HemK family [Cellulomonas flavigena DSM
           20109]
          Length = 273

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 81/191 (42%), Gaps = 4/191 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +   LGW  F  +RL +    F PR  TELL  +A+  +    +      +
Sbjct: 55  VARRVAGEPLETALGWVAFAGLRLQVGPGVFVPRRRTELLARTAVDLAR---DAGPAPVV 111

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           ++   G   V   ++ + P  +    D+   A+  A+ N    G     D L +     +
Sbjct: 112 VEACCGVAPVAALVVHDVPGARVHATDLDPAAVAWARRNLAGRGAVREGDLL-TPLPVRL 170

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  DV+V+N PY+    +  +  E RD +PR++LDGG DG+   R +       +   G
Sbjct: 171 RGHVDVLVANAPYVPHDAIATMPPEARDHEPRLALDGGRDGVDVQRRLLTLAPAWVRPGG 230

Query: 222 LCSVEIGYNQK 232
              VE    Q 
Sbjct: 231 YVLVETSTRQA 241


>gi|314955550|gb|EFS99953.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL027PA1]
          Length = 291

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNADDEDRF--NQMVDRRRSGEPAQDIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+       +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDSRRFDVVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    +  
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMATSD 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|330817452|ref|YP_004361157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia gladioli BSR3]
 gi|327369845|gb|AEA61201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia gladioli BSR3]
          Length = 312

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 14/156 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSER-- 149
           +   V  +L+L TG+G  CLA+L    F       VD+S  ALE+A+ N    G+  R  
Sbjct: 132 DPEQVGAVLELCTGSG--CLAVLAAEAFPHAEIDAVDLSEDALEVAEINISDYGLDHRIA 189

Query: 150 ------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                 +  L S+  +  E  +DVI+SNPPY+ +  +  L  E R  +P ++L GG DG+
Sbjct: 190 LHHGDLYAPLPSERLADPELRYDVILSNPPYVNADSMAALPDEYR-HEPEMALAGGDDGM 248

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              R I     + L +DG+  VEIG N++ +V   F
Sbjct: 249 DIVRRILREAKKWLKEDGVLVVEIG-NERHNVEAAF 283


>gi|225022789|ref|ZP_03711981.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944396|gb|EEG25605.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 293

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 9/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  ILG   F  + LT+    F PRPETE L D    +    +       I
Sbjct: 73  ITRRAHREPLQHILGTAPFGPLTLTVGPGVFIPRPETEQLAD----WVATHLGNTPNPLI 128

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160
           +DL TG+GA+   L    P      V++S +AL    +N    GV+    D         
Sbjct: 129 IDLCTGSGAIAGYLAHACPDANIYAVELSPEALTYTHTNLDPLGVTIVAGDATNPTLLEH 188

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G    +V+NPPY+       L  EV   DP +++ GG  G+     +     R L   
Sbjct: 189 LNGKATAVVTNPPYVPHTT--DLQPEVY-ADPPMAVFGGDTGMDVITRLIPTARRLLAPG 245

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR-VLLFC 263
           G+ + E       DVV++     L  V   +D+ G  R V   C
Sbjct: 246 GVFACEHDDTTGPDVVKLVAEAGLRQVTQHQDWAGQPRFVTAIC 289


>gi|319776557|ref|YP_004139045.1| adenine-specific methylase [Haemophilus influenzae F3047]
 gi|317451148|emb|CBY87381.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae F3047]
          Length = 314

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 3/145 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +++  ILDL TG+G + +A     P  +   +D+S  AL +A+ N   + +  R   +QS
Sbjct: 140 QELHHILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQS 199

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           + F+++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I     
Sbjct: 200 NLFTNILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAP 258

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIF 239
            +L ++G+   E+G N  V ++  +
Sbjct: 259 DYLTENGVLVCEVG-NSMVSLIEQY 282


>gi|282859871|ref|ZP_06268959.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Prevotella bivia JCVIHMP010]
 gi|282587274|gb|EFB92491.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Prevotella bivia JCVIHMP010]
          Length = 285

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV-------DSALAFSL 90
           L   + R    E +  +LG  +F      + S    PRPETE+LV       ++ +   L
Sbjct: 54  LAEIVCRLAASEPVQYVLGRENFAGRTFHVESGVLIPRPETEMLVQWIEEDYNTPVCGLL 113

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P       ++ILD+GTG+G + + L  +         DIS  AL IA+ NA+  G    F
Sbjct: 114 PPAP----LQILDIGTGSGCIAITLALDILNSSVAAWDISGDALLIARDNALRLGAKVNF 169

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
               +    + +  +D+IVSNPPYI     + +   V   +P  +L     D L  Y  I
Sbjct: 170 QLQDALSIEATDRCWDIIVSNPPYICEKECEAMAENVLQHEPHTALFVPNDDPLRFYTAI 229

Query: 210 ADGVSRHLNKDG 221
           A    + L K G
Sbjct: 230 AKLGKKTLTKGG 241


>gi|148652735|ref|YP_001279828.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter sp. PRwf-1]
 gi|148571819|gb|ABQ93878.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1]
          Length = 394

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 7/133 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDL TG+G  C+A+   S F   +    DI   ALE+A  N   +G+  + + ++SD 
Sbjct: 214 RILDLCTGSG--CIAIALASRFRDALVDAADIDNSALEVAAVNVEHHGMEHQLNLIESDL 271

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F  +  E  +++IV+NPPY+++  +  L  E    +P  +L  G DGL     I +  + 
Sbjct: 272 FEKIPAENQYELIVTNPPYVDAAAMAELPPEFI-HEPEHALAAGQDGLDLVHKILNEAAD 330

Query: 216 HLNKDGLCSVEIG 228
           +L+ +GL   E+G
Sbjct: 331 YLSPEGLLVCEVG 343


>gi|33519950|ref|NP_878782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Blochmannia floridanus]
 gi|33504296|emb|CAD83188.1| predicted rRNA or tRNA methylase [Candidatus Blochmannia
           floridanus]
          Length = 303

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G + +A+    P  K    DIS  AL++A+ N   + ++ +   + SD F++
Sbjct: 129 VLDLCTGSGCIAIAIATIYPKSKIDASDISIHALKVAEHNIQLHNLAHQILPIHSDLFNN 188

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+I++NPPY+ ++++  L  E    +P ++L    +GL     I   ++ +LN 
Sbjct: 189 IPLIKYDLIITNPPYVSNIVMRKLPKEFLH-EPTLALSANSNGLEIIHRILINITNYLNT 247

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           +G+   E G   K  V++ + +      N     GG
Sbjct: 248 NGILICETGI-SKNSVIQYYPNTPFHWFNFNHKDGG 282


>gi|153951215|ref|YP_001398334.1| HemK family modification methylase [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938661|gb|ABS43402.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 271

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D    F     +VR  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIEIDHEPYF----ELVRRFKSGEPFEYIFEKVDFWGLEFKIKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    D
Sbjct: 81  GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIILAKELGL-KITACD 134

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187
           I+ KALE+A  NA  + V    D    + F  +E  +D I SNPPYI+ S  +D    + 
Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIEENYDFIFSNPPYIKNSYPIDIWVQK- 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+
Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245

Query: 247 VNAFKDYGGNDRVLL 261
           V+ FKD    +R  +
Sbjct: 246 VDFFKDEQDYNRAFI 260


>gi|311278709|ref|YP_003940940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cloacae SCF1]
 gi|308747904|gb|ADO47656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cloacae SCF1]
          Length = 310

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +  GVDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDGVDISPDALAVAERNIEEHGLIHNVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 DLPQVQYDLIVTNPPYVDAEDMADLPGEYR-HEPELGLASGTDGLKLTRRILACAPDYLS 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGILICEVG 263


>gi|260910407|ref|ZP_05917079.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
           472 str. F0295]
 gi|260635483|gb|EEX53501.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
           472 str. F0295]
          Length = 284

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 7/179 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS   V  D  + L       L   + + ++   +  +LG  +F      +      PR
Sbjct: 32  GLSLADVYADKVTQLSQDDARLLHKMMDKLVQGVPVQYVLGRAEFAGRTFEVGQGVLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE L    +     R        +LD+GTG+G +   L  + P ++   +DIS KALE
Sbjct: 92  PETEELCTWIVQVCKDRATTGTSPTLLDIGTGSGCIATTLALDLPTWRVSAIDISQKALE 151

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           IA  NA       +F    +        L+DVIVSNPPY    I+ C   E R   P +
Sbjct: 152 IATRNAQKLDAEVQFALQDALSMPPDTNLWDVIVSNPPY----IMQC---EARQMQPNV 203


>gi|254172001|ref|ZP_04878677.1| methylase, putative [Thermococcus sp. AM4]
 gi|214033897|gb|EEB74723.1| methylase, putative [Thermococcus sp. AM4]
          Length = 193

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 11/116 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +Y +R+ L    +EP  +T LL ++        ++ +     LD+GTGTG + L + +++
Sbjct: 4   YYGLRILLDDSVYEPAEDTFLLAET--------VDVKPGEIALDIGTGTGIIALLMARKA 55

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
                +GVD++ KA+E+A+ NA+ NG+ E      SD F +VEG FDV+  N PY+
Sbjct: 56  KHV--LGVDVNPKAIELARKNALLNGI-ENVKFRLSDLFENVEGEFDVVTFNAPYL 108


>gi|118474800|ref|YP_891733.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414026|gb|ABK82446.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 261

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF +    +      PR ETE+LV   ++ +    +  + + I ++G G+G + ++L K 
Sbjct: 69  DFLDYEFEVGRGVLVPRYETEILVQKVVSIA----KNLENISICEIGIGSGVISISLAKI 124

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-ES 177
               K    DIS  AL+ A+ N    GV  + +   + +   VEG FD+IVSNPPYI + 
Sbjct: 125 LKNCKFTATDISEDALKYARKNISKFGV--QIELFNTSFLDGVEGDFDIIVSNPPYIAKD 182

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +D   +     +P  +L GG  G    + I + +++   K  +C  E+GY+QK  +  
Sbjct: 183 YKLDKWVMS----EPSQALFGGEKGDEILKKIVN-LAKDRTKFLVC--EMGYDQKASLSN 235

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
             E +  F    +KD  G DR
Sbjct: 236 ELE-KAGFKFEFYKDLAGFDR 255


>gi|146312520|ref|YP_001177594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter sp. 638]
 gi|145319396|gb|ABP61543.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Enterobacter sp. 638]
          Length = 310

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAYPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 DLPKLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILACAPDYLT 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGILICEVG 263


>gi|242398027|ref|YP_002993451.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus
           MM 739]
 gi|242264420|gb|ACS89102.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus
           MM 739]
          Length = 199

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 25/173 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +L +RD   +++ L    +EP  +T LL ++ +         +D    LD+GTGTG + L
Sbjct: 1   MLYYRD---LKIKLHPHVYEPAEDTFLLAENLMI--------KDGDFALDMGTGTGIIAL 49

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNP 172
            + K++ F   +GVD++  A+E+AK NA  NG++  +F   QSD F +V G FD+I  N 
Sbjct: 50  LMAKKAKFV--LGVDVNPIAVELAKENARLNGITNVKFK--QSDLFQNVGGKFDIITFNA 105

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PY+     + + L         +L GG +G        + V  +L ++G+  +
Sbjct: 106 PYLPGEPEELIDL---------ALVGGREGREVLDRFIEEVDGYLTENGIIQI 149


>gi|52548592|gb|AAU82441.1| HemK related protein [uncultured archaeon GZfos17F1]
          Length = 205

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 72/126 (57%), Gaps = 11/126 (8%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +  ++ L+   +EP  ++ LL+D+AL   +   ++   +RI+++GTG+G V  A+++
Sbjct: 5   QSHHGYQIHLTGAVYEPAEDSYLLIDAALNEIVGSNQR---LRIIEIGTGSGIVTAAMMR 61

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           ++P  +    DIS  A+  AK+N        R   +++D FS + G FD+IV N PY+ +
Sbjct: 62  DAPEHRYAATDISPHAVACAKAN--------RVPVVRADLFSGIRGRFDLIVFNAPYLPT 113

Query: 178 VIVDCL 183
              +C+
Sbjct: 114 APDECV 119


>gi|315231778|ref|YP_004072214.1| N5-glutamine methyltransferase [Thermococcus barophilus MP]
 gi|315184806|gb|ADT84991.1| N5-glutamine methyltransferase [Thermococcus barophilus MP]
          Length = 200

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 11/116 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  ++L L S  +EP  +T LL ++       +I + D+   LD+GTGTG + L + K++
Sbjct: 6   YKGIKLKLHSQVYEPAEDTFLLAENL------KIREGDIA--LDVGTGTGIIALLMAKKA 57

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            F   +GVDI+  A+E+AK NA  N + +  +   SD F +VEG FD+I  N PY+
Sbjct: 58  KFV--LGVDINPIAVELAKENARINEI-KNVEFRVSDLFENVEGKFDIITFNSPYL 110


>gi|313141021|ref|ZP_07803214.1| methylase of polypeptide chain release factors [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313133531|gb|EFR51148.1| methylase of polypeptide chain release factors [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 321

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 16/249 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+V     RF     I R    E +  I G   F  + L +    F PRPETE +V + +
Sbjct: 77  DAVTTALARFHAM--IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGI 134

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN------ 140
            + L R E+    RI+DL  G+GA+ L+L+ E    +   V+   +  +    N      
Sbjct: 135 DW-LTR-ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISR 192

Query: 141 ----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
               A  N   E  D       +  +G  D++V+NPPYI    +     EVRD DP+ +L
Sbjct: 193 LDPLAADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPEQ-PEVRDHDPKAAL 251

Query: 197 DGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            GG  DG      I    +  L   G+  +E   +Q   +V   ++      +   D+ G
Sbjct: 252 YGGSADGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTG 311

Query: 256 NDRVLLFCR 264
             R L   R
Sbjct: 312 RPRYLFAVR 320


>gi|313675595|ref|YP_004053591.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Marivirga tractuosa DSM 4126]
 gi|312942293|gb|ADR21483.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marivirga tractuosa DSM 4126]
          Length = 281

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 9/211 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  ILG  +FY  +  ++ +   PR ETE LV   L  + P + ++ VV   D+GTG+G 
Sbjct: 71  IQHILGKVEFYGRQFLVNPNVLIPRRETEELVHLILE-NHPDLSEQMVV---DIGTGSGI 126

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVI 168
           + + + KE    +   VDIS  AL  AK NA  N  +  F  +Q+D       L   ++ 
Sbjct: 127 IPITIAKERKHCEVYAVDISSSALATAKRNAQLNHANINF--IQADILEEELELPKSNIW 184

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           VSNPPY+       +  +V + +P  +L     D L  Y  I+    +HL   G    EI
Sbjct: 185 VSNPPYVLEKEKAEMQPKVFEHEPSNALFVPDHDALIFYERISMLAFKHLVSGGELYFEI 244

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                 +V +I E +    V   +D  G +R
Sbjct: 245 NEQFGREVKKIMEDKGFQDVKVMRDMQGKNR 275


>gi|308184812|ref|YP_003928945.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori SJM180]
 gi|308060732|gb|ADO02628.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori SJM180]
          Length = 276

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 31/233 (13%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           RFF    + + L    I  +LG  DFY     ++     PRPETE+LV  AL      I 
Sbjct: 55  RFF--KLVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDV----IS 108

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  +  + ++G G+G V ++L  E+P       DIS KAL++A  N     + ER    Q
Sbjct: 109 QYHLKEVGEIGIGSGCVSVSLALENPNLSIYASDISPKALKVALKNIERFNLKERVFLKQ 168

Query: 155 SDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG---LSH 205
           +  +  +  + +++VSNPPYI      E  ++          +P  +L GG+ G   L  
Sbjct: 169 THLWDHMP-MIEMLVSNPPYIARNYPLEKSVLK---------EPHKALFGGVKGDEILKE 218

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              +A G+     K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 219 IVFLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|114563834|ref|YP_751347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella frigidimarina NCIMB 400]
 gi|114335127|gb|ABI72509.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 314

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 7/176 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P +  + V RILDL TG+  + +A        +   +DIS  ALE+A+ N  + GV +R 
Sbjct: 127 PWLYNKPVNRILDLCTGSACIAIACAYAFEDAEVDALDISEDALEVAQINIESLGVLDRV 186

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +QSD FS++     +D+IVSNPPY+++  +  +  E    +P I L  G DGL   + 
Sbjct: 187 FPMQSDLFSAIPKGQHYDLIVSNPPYVDAQDIGDMPDEYH-HEPAIGLASGNDGLDLTKR 245

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + +L + GL  VE+G N  V ++  +       V+   ++GG D V +  R
Sbjct: 246 ILANAADYLTETGLLVVEVG-NSMVHLIEQYPDMPFTWVDF--EFGG-DGVFVLTR 297


>gi|255324517|ref|ZP_05365634.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium tuberculostearicum SK141]
 gi|255298423|gb|EET77723.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium tuberculostearicum SK141]
          Length = 278

 Score = 69.3 bits (168), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 23/190 (12%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  +LG   F  + L +    F PRPETE++ D A       +   +  R++D
Sbjct: 63  RREAREPLQYVLGSAWFGPLELKVGPGVFIPRPETEVMADWA-------VHNAEGPRLVD 115

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162
           L TGTGA+ L L    P  +   V+++  AL   ++N    GV   + D    D  +   
Sbjct: 116 LCTGTGALALYLAHYLPEAQVRAVELADAALAYTQTNTRNTGVEVIQADATAGDTLADWN 175

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYRTIADGVSRH 216
           G  D++V+NPPY+          E  D +P +  D       G DG+     +   ++R 
Sbjct: 176 GTVDLLVTNPPYVP---------ETPDLEPEVYHDPHNAVFAGADGMGVITGLIPTIARL 226

Query: 217 LNKDGLCSVE 226
           +   G  ++E
Sbjct: 227 VRPGGKVAIE 236


>gi|257453414|ref|ZP_05618709.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enhydrobacter aerosaccus SK60]
 gi|257449166|gb|EEV24114.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enhydrobacter aerosaccus SK60]
          Length = 389

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG+G + +AL    P       DI   ALE+A  N   + ++ + + ++S+ F 
Sbjct: 211 RMLDLCTGSGCIAIALASRFPDAMVDASDIDKNALEVAAVNVDHHHMNHQVNLIESNLFE 270

Query: 160 SV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            V  E  +D+IV+NPPY+++  +  L  E    +P  +L  G DGL     I      +L
Sbjct: 271 KVPAENQYDLIVTNPPYVDAATMADLPPEFL-HEPDHALAAGQDGLDLVHHILYNAPDYL 329

Query: 218 NKDGLCSVEIG 228
            +DGL   E+G
Sbjct: 330 TRDGLLVCEVG 340


>gi|309973336|gb|ADO96537.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus
           influenzae R2846]
          Length = 314

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L+
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLS 262

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           ++G+   E+G N  V ++  +
Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282


>gi|224283866|ref|ZP_03647188.1| modification methylase, HemK family protein [Bifidobacterium
           bifidum NCIMB 41171]
 gi|311064751|ref|YP_003971476.1| peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum PRL2010]
 gi|310867070|gb|ADP36439.1| HemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum PRL2010]
          Length = 329

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 16/249 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+V     RF     I R    E +  I G   F  + L +    F PRPETE +V + +
Sbjct: 85  DAVTTALARFHAM--IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGI 142

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN------ 140
            + L R E+    RI+DL  G+GA+ L+L+ E    +   V+   +  +    N      
Sbjct: 143 DW-LTR-ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISR 200

Query: 141 ----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
               A  N   E  D       +  +G  D++V+NPPYI    +     EVRD DP+ +L
Sbjct: 201 LDPLAADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPEQ-PEVRDHDPKAAL 259

Query: 197 DGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            GG  DG      I    +  L   G+  +E   +Q   +V   ++      +   D+ G
Sbjct: 260 YGGSADGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTG 319

Query: 256 NDRVLLFCR 264
             R L   R
Sbjct: 320 RPRYLFAVR 328


>gi|304373117|ref|YP_003856326.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma hyorhinis HUB-1]
 gi|304309308|gb|ADM21788.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma hyorhinis HUB-1]
          Length = 243

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +I+G+    N++L ++     PR ETE L+  A  +    I  +  V  LDLG G+G 
Sbjct: 42  IQKIIGFVCMQNLQLKINKKVLIPRYETEELILQAYKY----INGQSTV--LDLGCGSGF 95

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + LA+ K +   + V  DI  +A+  +K NA  N +  +   +QSD F +++   FDVI+
Sbjct: 96  IGLAIAKNTKAKQVVLSDIDSQAILQSKINAKLNKL--KVKIIQSDLFDNLKKYKFDVII 153

Query: 170 SNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            NPPY+  E   +D     V D++P  +L     G   Y+ I       L   G+   EI
Sbjct: 154 CNPPYLDFEKSKLDS---SVLDYEPWNALFAKQKGNYFYQKILKQYKNFLKPKGVILFEI 210


>gi|62180957|ref|YP_217374.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62128590|gb|AAX66293.1| putative methylase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715437|gb|EFZ07008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 310

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|283477747|emb|CAY73663.1| putative adenine-specific methylase [Erwinia pyrifoliae DSM 12163]
          Length = 310

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++ D F 
Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G +    +V + E          +   G D V +  R
Sbjct: 254 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 295


>gi|145637044|ref|ZP_01792707.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH]
 gi|145269698|gb|EDK09638.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH]
          Length = 314

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L+
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLS 262

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           ++G+   E+G N  V ++  +
Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282


>gi|220913096|ref|YP_002488405.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
 gi|219859974|gb|ACL40316.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
          Length = 288

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   F  + L +    F PRPETE +V       +  +  +D  RI+DLGTG+G
Sbjct: 71  PLQHITGVAHFRYLELAVGPGVFIPRPETESVVQ----LVIDHVAGKDAPRIVDLGTGSG 126

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+  ++  E P  +   V+ S  A   A  N    GV      L++     + G FDV++
Sbjct: 127 AIAGSIAHEVPGAEVHAVEFSPLAHAWAARNLEPLGVRLVLGDLRTA-LPELNGTFDVVI 185

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
           SNPPYI +  +     EV   DP  +L  GG DG+
Sbjct: 186 SNPPYIPAEAIPNE-PEVALHDPPEALYGGGADGM 219


>gi|161612878|ref|YP_001586844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|161362242|gb|ABX66010.1| hypothetical protein SPAB_00584 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 310

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|16761309|ref|NP_456926.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|16765712|ref|NP_461327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|29140995|ref|NP_804337.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|207857803|ref|YP_002244454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|213160946|ref|ZP_03346656.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213426187|ref|ZP_03358937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213582768|ref|ZP_03364594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213616434|ref|ZP_03372260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213650420|ref|ZP_03380473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|213857263|ref|ZP_03384234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|224583126|ref|YP_002636924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|289826755|ref|ZP_06545700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|61250532|sp|P0A293|YFCB_SALTY RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|61250534|sp|P0A294|YFCB_SALTI RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|25512989|pir||AG0804 conserved hypothetical protein STY2617 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16420929|gb|AAL21286.1| putative methylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16503608|emb|CAD07617.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136620|gb|AAO68186.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|206709606|emb|CAR33951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467653|gb|ACN45483.1| hypothetical protein SPC_1320 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247591|emb|CBG25418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994488|gb|ACY89373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158943|emb|CBW18456.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913376|dbj|BAJ37350.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320086818|emb|CBY96590.1| putative adenine-specific methylase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222913|gb|EFX47984.1| Ribosomal protein L3 methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130718|gb|ADX18148.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|326624209|gb|EGE30554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|332989318|gb|AEF08301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 310

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|310768216|gb|ADP13166.1| putative adenine-specific methylase [Erwinia sp. Ejp617]
          Length = 310

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++ D F 
Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G +    +V + E          +   G D V +  R
Sbjct: 254 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 295


>gi|238912336|ref|ZP_04656173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
          Length = 310

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|110642534|ref|YP_670264.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 536]
 gi|110344126|gb|ABG70363.1| hypothetical adenine-specific methylase YfcB [Escherichia coli 536]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|205353498|ref|YP_002227299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205273279|emb|CAR38244.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628591|gb|EGE34934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 310

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|256833003|ref|YP_003161730.1| modification methylase, HemK family [Jonesia denitrificans DSM
           20603]
 gi|256686534|gb|ACV09427.1| modification methylase, HemK family [Jonesia denitrificans DSM
           20603]
          Length = 318

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 97/233 (41%), Gaps = 13/233 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT    R    E +  + G   F  + L + +  F PRPETELL + A+  +        
Sbjct: 77  LTQLAQRREHREPLQHLTGIAYFRRLSLEVGAGVFIPRPETELLAEHAITEAHRIAANGT 136

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156
              ++DL TG+GA+ LA+  E P  +   V++   A   A  N   +  ++     Q D 
Sbjct: 137 QPVVVDLCTGSGAIALAIATEVPSAQVYAVELDQGAYTWATRN--NHRYADPVHLTQGDA 194

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGV 213
               S +    D++VSNPPYI S  +     EV   DP ++L G G DGL   R +    
Sbjct: 195 RTALSHMAARVDIVVSNPPYIPSDAI-PRDHEVAHHDPAVALYGLGDDGLEVPRGVTMNA 253

Query: 214 SRHLNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +  L   GL  +E   +Q       VD   +       L     D  G  R++
Sbjct: 254 ALLLRPQGLYVMEHADSQADAARAMVDGTTLGGDAAFTLAKTHADLTGRPRMV 306


>gi|296393117|ref|YP_003658001.1| HemK family modification methylase [Segniliparus rotundus DSM
           44985]
 gi|296180264|gb|ADG97170.1| modification methylase, HemK family [Segniliparus rotundus DSM
           44985]
          Length = 286

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 10/215 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +LG   F +V + +    F PRPETE L   ALA    R+ +     +LDL +G+G
Sbjct: 69  PLQHLLGKVFFASVEVFVGPGVFIPRPETEQLHVWALAMLRARLWEIPEPVVLDLCSGSG 128

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGL 164
           ++ L++ +  P  K   V+   +AL   + NA  N      D +  D       +   G 
Sbjct: 129 SLGLSIARSVPEAKVALVENDPEALVWTRRNA--NTPDADVDVVGGDVTDVALLAERNGA 186

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            DVIV+NPPY+ +        EV DFDP  ++  G DGL     +   V+R L   G   
Sbjct: 187 VDVIVANPPYVPAGTPTP--PEVADFDPPQAVFAGPDGLDVITGLVGNVARWLKPGGAFG 244

Query: 225 VEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
           VE        V  +F   + F  V    D  G  R
Sbjct: 245 VEHDEGHADQVRGLFAHDERFCEVKTMNDLSGRPR 279


>gi|56412718|ref|YP_149793.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197361652|ref|YP_002141288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56126975|gb|AAV76481.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093128|emb|CAR58572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 310

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|82777741|ref|YP_404089.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae Sd197]
 gi|81241889|gb|ABB62599.1| putative adenine-specific methylase [Shigella dysenteriae Sd197]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|332344114|gb|AEE57448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific PrmB [Escherichia coli UMNK88]
          Length = 310

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++S
Sbjct: 131 RQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRS 190

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    +
Sbjct: 191 DLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAA 249

Query: 215 RHLNKDGLCSVEIG 228
            +L  DG+   E+G
Sbjct: 250 DYLADDGVLICEVG 263


>gi|259907873|ref|YP_002648229.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96]
 gi|224963495|emb|CAX54983.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96]
          Length = 292

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++ D F 
Sbjct: 117 HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQHVTPIRCDLFR 176

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 177 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTRRILGCAAEYLS 235

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G +    +V + E          +   G D V +  R
Sbjct: 236 EQGVLICEVGNS----MVHLIEQYPDVPFTWLEFENGGDGVFMLTR 277


>gi|157877432|ref|XP_001687033.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68130108|emb|CAJ09416.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 514

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 39/167 (23%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97
           H+ +  I+G + F+   +   +    PRPETE+     +   L R E+            
Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYRHLARAERSTPATGFSPAVS 302

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
            +RILD+  GTG + +AL K  P      +DI  +A+ +++ NA+ NG+S ER+   +SD
Sbjct: 303 PIRILDVCCGTGCIGVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPERYSARESD 362

Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175
            F                             +  G +DVIVSNPPY+
Sbjct: 363 MFGCFLEGRVSGPPGKSANLSEDRPLGTVKDAYAGTYDVIVSNPPYV 409


>gi|332278517|ref|ZP_08390930.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|332100869|gb|EGJ04215.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|110806296|ref|YP_689815.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 5 str. 8401]
 gi|110615844|gb|ABF04511.1| putative adenine-specific methylase [Shigella flexneri 5 str. 8401]
 gi|323944843|gb|EGB40909.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|24113702|ref|NP_708212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 301]
 gi|30063756|ref|NP_837927.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 2457T]
 gi|24052771|gb|AAN43919.1| putative adenine-specific methylase [Shigella flexneri 2a str. 301]
 gi|30042011|gb|AAP17737.1| putative adenine-specific methylase [Shigella flexneri 2a str.
           2457T]
 gi|281601772|gb|ADA74756.1| putative adenine-specific methylase [Shigella flexneri 2002017]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|311740613|ref|ZP_07714440.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304133|gb|EFQ80209.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 278

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 23/190 (12%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E +  +LG   F  + L +    F PRPETE++ D A       +   D  R++D
Sbjct: 63  RREAREPLQYVLGSAWFGPLELKVGPGVFIPRPETEVMADWA-------VRNVDGPRLVD 115

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162
           L TGTGA+ L L    P  +   V+++  AL    +N    GV   + D    D  +   
Sbjct: 116 LCTGTGALALYLAHYLPKAQVRAVELADAALAYTHANTHNTGVEVIQADATADDTLADWN 175

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYRTIADGVSRH 216
           G  D++V+NPPY+          E  D +P +  D       G DG+     +   ++R 
Sbjct: 176 GTVDLLVTNPPYVP---------ETPDLEPEVYHDPHNAVFAGADGMGVITGLIPTIARL 226

Query: 217 LNKDGLCSVE 226
           +   G  ++E
Sbjct: 227 VRPGGKVAIE 236


>gi|26248718|ref|NP_754758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli CFT073]
 gi|26109124|gb|AAN81326.1|AE016764_8 Hypothetical adenine-specific methylase yfcB [Escherichia coli
           CFT073]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYRH-EPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|16273121|ref|NP_439357.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae Rd KW20]
 gi|260581099|ref|ZP_05848920.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae RdAW]
 gi|1175938|sp|P45106|Y1201_HAEIN RecName: Full=Uncharacterized adenine-specific methylase HI_1201
 gi|1574130|gb|AAC22855.1| adenine specific methylase, putative [Haemophilus influenzae Rd
           KW20]
 gi|260092228|gb|EEW76170.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae RdAW]
          Length = 314

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|74312848|ref|YP_311266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sonnei Ss046]
 gi|73856325|gb|AAZ89032.1| putative adenine-specific methylase [Shigella sonnei Ss046]
          Length = 421

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|291298830|ref|YP_003510108.1| modification methylase HemK family [Stackebrandtia nassauensis DSM
           44728]
 gi|290568050|gb|ADD41015.1| modification methylase, HemK family [Stackebrandtia nassauensis DSM
           44728]
          Length = 291

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 12/188 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  +LG   F    L +    F PRPETE L + ALA    R+       +
Sbjct: 61  VERRAAREPLQHVLGTAPFRYAELAVGPGVFVPRPETEQLAEWALA----RLATVAAPLV 116

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWF 158
           +DL  G+GA+  A++ E P    V V+   +A    + N   +GV+ R    D +  +  
Sbjct: 117 VDLCAGSGAIGHAIVSERPDAVVVLVEKYPEAANWLRRN--LDGVAARVVEADAVSPETL 174

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           S ++G  D ++SNPPY+ +     +  EV   DP  ++ GG  GL   R +    +R L 
Sbjct: 175 SDLDGQCDAVLSNPPYVPTST--AVSPEVA-ADPATAVFGGSCGLDVIRPLIPRAARLLR 231

Query: 219 KDGLCSVE 226
             G+ ++E
Sbjct: 232 PGGVVAIE 239


>gi|322617130|gb|EFY14036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322617565|gb|EFY14464.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322624806|gb|EFY21635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322630356|gb|EFY27126.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322634536|gb|EFY31269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322639247|gb|EFY35939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322640110|gb|EFY36777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322645672|gb|EFY42196.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322652034|gb|EFY48397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322656207|gb|EFY52504.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322659359|gb|EFY55606.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322665819|gb|EFY62002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322669943|gb|EFY66084.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322673928|gb|EFY70025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322678687|gb|EFY74743.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322683519|gb|EFY79533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322687594|gb|EFY83564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323193572|gb|EFZ78777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323198479|gb|EFZ83581.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323204591|gb|EFZ89594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323208471|gb|EFZ93410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323213607|gb|EFZ98397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323218357|gb|EGA03067.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219685|gb|EGA04166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225680|gb|EGA09906.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323232351|gb|EGA16454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323235616|gb|EGA19700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323241225|gb|EGA25261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323244967|gb|EGA28969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323250086|gb|EGA33980.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253870|gb|EGA37695.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255339|gb|EGA39111.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262798|gb|EGA46349.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323264173|gb|EGA47680.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270871|gb|EGA54309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
          Length = 310

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDSEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|154346308|ref|XP_001569091.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066433|emb|CAM44225.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 497

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 39/190 (20%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------- 98
           H+ +  I+G + F+   +   +    PRPETE+     +   L R E+            
Sbjct: 226 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYNHLARAERSTTATNVSSAAS 285

Query: 99  -VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD 156
            +RILD+  GTG + +AL K         +DI  +A+ +++ NA  NG+  ER+  ++SD
Sbjct: 286 PIRILDVCCGTGCIGVALAKHLSTATVTALDILSEAVRVSRENAARNGIPPERYSAMESD 345

Query: 157 WFS----------------------------SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            FS                            +  G +DVIVSNPPY+       L   + 
Sbjct: 346 MFSCFLDEQASALPGERANLSDDRPMGTVKDTYAGTYDVIVSNPPYVLPKQYTDLPCTIT 405

Query: 189 DFDPRISLDG 198
            ++ + +L G
Sbjct: 406 HWESKTALVG 415


>gi|91211627|ref|YP_541613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UTI89]
 gi|117624520|ref|YP_853433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli APEC O1]
 gi|237704811|ref|ZP_04535292.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 3_2_53FAA]
 gi|91073201|gb|ABE08082.1| protein-(glutamine-N5) methyltransferase [Escherichia coli UTI89]
 gi|115513644|gb|ABJ01719.1| protein-(glutamine-N5) methyltransferase [Escherichia coli APEC O1]
 gi|226901177|gb|EEH87436.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 3_2_53FAA]
          Length = 421

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|148828351|ref|YP_001293104.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae PittGG]
 gi|148719593|gb|ABR00721.1| N5-glutamine methyltransferase [Haemophilus influenzae PittGG]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLT 262

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           ++G+   E+G N  V ++  +
Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282


>gi|319897333|ref|YP_004135529.1| adenine-specific methylase [Haemophilus influenzae F3031]
 gi|317432838|emb|CBY81203.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae F3031]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|227548001|ref|ZP_03978050.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079907|gb|EEI17870.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium lipophiloflavum DSM 44291]
          Length = 283

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 11/224 (4%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           T A+ R    E +  I G   F  + L +    F PRPETE+L D    +++ ++     
Sbjct: 58  TQALRRRAACEPLQHITGCAPFGPLELAVGPGVFIPRPETEVLAD----WAVRKLTGVAS 113

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQS 155
             ++DLGTG+GA+ + +       +   V+ S  A   A+ NA   GV       D    
Sbjct: 114 PVVVDLGTGSGALAIYIAHALDDARVTAVEASATARRYARGNAERLGVDVTVIAGDMTDP 173

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                + G  D++VSNPPY+   +   +G EV   DP  ++  G DG+   R +    +R
Sbjct: 174 QLLDQMRGQVDLVVSNPPYVP--LGQDVGAEVL-HDPDEAVFSGADGMDAIRGLVPVAAR 230

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
            L   G   +E        V  +  +   F  V A +D  G  R
Sbjct: 231 LLAPGGALGIEHDDTTSQKVQEVVAAHGQFSDVQAREDLTGRAR 274


>gi|256822180|ref|YP_003146143.1| HemK family modification methylase [Kangiella koreensis DSM 16069]
 gi|256795719|gb|ACV26375.1| modification methylase, HemK family [Kangiella koreensis DSM 16069]
          Length = 304

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 2/135 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + D  RILDL  G+G + LA+       + V  DIS  A+ +A  N    G+  +  T+ 
Sbjct: 131 EADNPRILDLCCGSGCIGLAIAAYIDDAEVVLSDISDDAITVADINNERLGLYPKAQTVV 190

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD F S+ +  FD+IVSNPPY++S  +  +  E +  +P I L  G DGL   R I +  
Sbjct: 191 SDLFESLSDEKFDLIVSNPPYVDSEDLSDMPAEYQ-HEPEIGLGSGEDGLDITRRILEQA 249

Query: 214 SRHLNKDGLCSVEIG 228
           + HL + G   VE+G
Sbjct: 250 AEHLTEQGCLIVEVG 264


>gi|329124068|ref|ZP_08252615.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius
           ATCC 11116]
 gi|327467493|gb|EGF12991.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius
           ATCC 11116]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|296104016|ref|YP_003614162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058475|gb|ADF63213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 310

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R    ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++
Sbjct: 130 NRQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIR 189

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           SD F  +  L +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    
Sbjct: 190 SDLFRDLPTLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILACA 248

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +L  DG+   E+G N  V ++  +
Sbjct: 249 PDYLTDDGVLICEVG-NSMVHLIEQY 273


>gi|330723257|gb|AEC45627.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mycoplasma hyorhinis MCLD]
          Length = 243

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 14/180 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I +I+G+    N++L ++     PR ETE L+  A  +    I  +  V  LDLG G+G 
Sbjct: 42  IQKIIGFVCMQNLQLKINKKVLIPRYETEELILQAYKY----INGQSTV--LDLGCGSGF 95

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + LA+ K +   + V  DI  +A+  +K NA  N +  +   +QSD F +++   FDVI+
Sbjct: 96  IGLAIAKNTKAKQVVLSDIDSQAILQSKINAKLNKL--KVKIIQSDLFDNLKKYKFDVII 153

Query: 170 SNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            NPPY+  E   +D     V D++P  +L     G   Y+ I       L   G+   EI
Sbjct: 154 CNPPYLDFEKSKLDS---SVLDYEPWNALFAKQKGNYFYQKILKQYKSFLKPKGVILFEI 210


>gi|260582130|ref|ZP_05849924.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae NT127]
 gi|260094762|gb|EEW78656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae NT127]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|261855214|ref|YP_003262497.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Halothiobacillus neapolitanus c2]
 gi|261835683|gb|ACX95450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Halothiobacillus neapolitanus c2]
          Length = 326

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 7/139 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG+G + +AL +  P       DIS  AL IA  N     + +R +  QSD   +
Sbjct: 154 ILDIGTGSGCLAIALAQYFPEAMISACDISMDALSIAARNVRDYQLEDRVELYQSDLLDN 213

Query: 161 VEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           ++        FD+I+SNPPY++    + +  E    +P ++L     GL+    + D   
Sbjct: 214 LKDETDAPLRFDLIISNPPYVDPAEAEDMPEEYH-HEPAMALYAPNQGLALVERMLDTAG 272

Query: 215 RHLNKDGLCSVEIGYNQKV 233
            HL+ DG   VE+G  +++
Sbjct: 273 EHLSPDGYLFVEVGNGRRL 291


>gi|33152710|ref|NP_874063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus ducreyi 35000HP]
 gi|33148934|gb|AAP96452.1| putative adenine-specific methylase [Haemophilus ducreyi 35000HP]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 3/143 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ +   + S+ FS
Sbjct: 143 RILDLCTGSGCIAIACAQRFPNAEIDAVDLSIDALDVAQINIERHQVAHQVFPISSNLFS 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY++   ++ +  E +  +P+++L  G+DGL   +        +L 
Sbjct: 203 DIPQDKYDLIVTNPPYVDEEDLNEMPYEFQ-HEPKLALGSGVDGLDITKQTLAKAPDYLT 261

Query: 219 KDGLCSVEIGYNQKVDVVRIFES 241
            +G+   E+G N  + ++  F +
Sbjct: 262 DNGVLVCEVG-NSMLHLIEQFPA 283


>gi|293415624|ref|ZP_06658267.1| adenine-specific DNA-methyltransferase [Escherichia coli B185]
 gi|291433272|gb|EFF06251.1| adenine-specific DNA-methyltransferase [Escherichia coli B185]
          Length = 421

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|145641198|ref|ZP_01796778.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
 gi|145274035|gb|EDK13901.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.4-21]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|145639279|ref|ZP_01794885.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII]
 gi|145271582|gb|EDK11493.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII]
 gi|309751156|gb|ADO81140.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus
           influenzae R2866]
          Length = 314

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|82544812|ref|YP_408758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii Sb227]
 gi|81246223|gb|ABB66931.1| putative adenine-specific methylase [Shigella boydii Sb227]
          Length = 421

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|331695520|ref|YP_004331759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950209|gb|AEA23906.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudonocardia dioxanivorans CB1190]
          Length = 291

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 106/255 (41%), Gaps = 19/255 (7%)

Query: 17  LSSHQVIVD----PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDT 71
           L++H V VD    P   L DR        +V R    E +  +LG      V + +    
Sbjct: 32  LAAHVVGVDRGRLPMVPLVDRDVVETYRVLVSRRAAREPLQHVLGTAVLGPVEVAVGPGV 91

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PRPETELL++  LA    RI       ++DL TG+GA+ LA+    P  +   V+   
Sbjct: 92  FTPRPETELLLEWGLA----RIADVAHPLVVDLCTGSGALALAIAAARPDAQVHAVEADP 147

Query: 132 KALEIAKSN-------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            AL  A+ N         T       D   +D    +E   D++V NPPY+       + 
Sbjct: 148 GALVWAQRNIAAQAAAGATPVTLHAADVRWTDLLVELEAKVDLVVCNPPYVPDGT--PVP 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV D+DP  ++ GG DGL   R +    +  L   G  ++E    Q      +   RK+
Sbjct: 206 PEVADWDPPGAVFGGPDGLEIVRAVVSTAAGLLRHGGWLAIEHDDTQGESAPGLLARRKV 265

Query: 245 FL-VNAFKDYGGNDR 258
           F  V    D  G  R
Sbjct: 266 FSDVADHADLAGRPR 280


>gi|145633068|ref|ZP_01788800.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655]
 gi|144986294|gb|EDJ92873.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655]
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLT 262

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           ++G+   E+G N  V ++  +
Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282


>gi|323936620|gb|EGB32907.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520]
 gi|323940973|gb|EGB37160.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482]
          Length = 421

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|68249747|ref|YP_248859.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 86-028NP]
 gi|68057946|gb|AAX88199.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae 86-028NP]
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|148826190|ref|YP_001290943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae PittEE]
 gi|148716350|gb|ABQ98560.1| N5-glutamine methyltransferase [Haemophilus influenzae PittEE]
          Length = 314

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGNDGLNITKQILKQAPDYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|15802877|ref|NP_288904.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 EDL933]
 gi|12516692|gb|AAG57459.1|AE005464_10 putative adenine-specific methylase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 421

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|291283571|ref|YP_003500389.1| putative adenine-specific methylase [Escherichia coli O55:H7 str.
           CB9615]
 gi|13362684|dbj|BAB36637.1| putative adenine-specific methylase [Escherichia coli O157:H7 str.
           Sakai]
 gi|209764668|gb|ACI80646.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764670|gb|ACI80647.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764672|gb|ACI80648.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764674|gb|ACI80649.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764676|gb|ACI80650.1| putative adenine-specific methylase [Escherichia coli]
 gi|290763445|gb|ADD57406.1| Putative adenine-specific methylase [Escherichia coli O55:H7 str.
           CB9615]
          Length = 421

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 246 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 305

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 306 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 364

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 365 DDGVLICEVG 374


>gi|289425387|ref|ZP_06427164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK187]
 gi|289154365|gb|EFD03053.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK187]
          Length = 291

 Score = 68.6 bits (166), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 9/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I        D  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCEALRIQPSQLIRVASVNAADEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FDV+V+NPPY+    V  +
Sbjct: 146 AVEVDDAALTWTRRNLCDSGV----EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    +  
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMATSD 261

Query: 244 LF-LVNAFKDYGGNDR 258
           ++  +    D  G  R
Sbjct: 262 MWEQIEDHDDLAGRPR 277


>gi|319943844|ref|ZP_08018125.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC
           51599]
 gi|319743077|gb|EFV95483.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC
           51599]
          Length = 355

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 8/164 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG G++ +      P  + V  DIS  AL++A  N    G+  R   +Q D F 
Sbjct: 182 RVLDLCTGGGSLAIIAAHYLPDSEVVASDISADALQLAAENIADYGLENRIRLVQGDLFQ 241

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +++G  F +I+ NPPY+ +  +  L  E R  +P  +L  G DG+     +      HL 
Sbjct: 242 NLQGESFKLILCNPPYVNAESMAALPSEYR-AEPEKALGSGPDGMDLITRLLHEAPEHLW 300

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLL 261
             G+ ++EIG+      +  F++R   L   +     G+DR++L
Sbjct: 301 PCGVLALEIGHE-----MPNFQARFPTLTWTSIPVAQGDDRIVL 339


>gi|229844844|ref|ZP_04464982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 6P18H1]
 gi|229812225|gb|EEP47916.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 6P18H1]
          Length = 314

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   VD+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L 
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGSDGLNITKQILKLAPNYLT 262

Query: 219 KDGLCSVEIG 228
           ++G+   E+G
Sbjct: 263 ENGVLVCEVG 272


>gi|329297421|ref|ZP_08254757.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Plautia stali symbiont]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      +++D F 
Sbjct: 135 HILDMCTGSGCIAIACAYVFPEAEVDAVDISTDALAVAEQNIEEHGLLHHVTPIRADLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++  + +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 NLPQVKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVRRILACAPDYLS 253

Query: 219 KDGLCSVEIG 228
           + G+   E+G
Sbjct: 254 EQGVLICEVG 263


>gi|157144728|ref|YP_001452047.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter koseri ATCC BAA-895]
 gi|157081933|gb|ABV11611.1| hypothetical protein CKO_00455 [Citrobacter koseri ATCC BAA-895]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISSDALAVTEHNIEEHGLLNHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            DG+   E+G N  V ++  +
Sbjct: 254 DDGILICEVG-NSMVHLIEQY 273


>gi|38704076|ref|NP_311241.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. Sakai]
 gi|168748186|ref|ZP_02773208.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|168755089|ref|ZP_02780096.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168761225|ref|ZP_02786232.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767963|ref|ZP_02792970.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772937|ref|ZP_02797944.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|168780193|ref|ZP_02805200.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787244|ref|ZP_02812251.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|168798507|ref|ZP_02823514.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|195935710|ref|ZP_03081092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC4024]
 gi|208809728|ref|ZP_03252065.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814004|ref|ZP_03255333.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208821799|ref|ZP_03262119.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400438|ref|YP_002271740.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217327637|ref|ZP_03443720.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254794223|ref|YP_003079060.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|261223215|ref|ZP_05937496.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259235|ref|ZP_05951768.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|187771349|gb|EDU35193.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188017230|gb|EDU55352.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002135|gb|EDU71121.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189357616|gb|EDU76035.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363009|gb|EDU81428.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189368252|gb|EDU86668.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372815|gb|EDU91231.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|189378909|gb|EDU97325.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|208729529|gb|EDZ79130.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735281|gb|EDZ83968.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208741922|gb|EDZ89604.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209161838|gb|ACI39271.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217320004|gb|EEC28429.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254593623|gb|ACT72984.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|320192045|gb|EFW66690.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. EC1212]
 gi|320641158|gb|EFX10637.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320646374|gb|EFX15297.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320651644|gb|EFX20024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320657395|gb|EFX25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662930|gb|EFX30254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667674|gb|EFX34585.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326339683|gb|EGD63494.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. 1125]
 gi|326344145|gb|EGD67906.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. 1044]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|312173062|emb|CBX81317.1| putative adenine-specific methylase [Erwinia amylovora ATCC
           BAA-2158]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++ D F 
Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQHVTPIRCDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPSEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G N  V ++  +     F    F++  G D V +  R
Sbjct: 254 EQGVLICEVG-NSMVHLINQYPDVP-FTWLEFEN--GGDGVFMLTR 295


>gi|222034086|emb|CAP76827.1| Uncharacterized adenine-specific methylase yfcB [Escherichia coli
           LF82]
 gi|312946949|gb|ADR27776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|256384223|gb|ACU78793.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385055|gb|ACU79624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455251|gb|ADH21486.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 282

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDYKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++ D   PR E+EL++D A  F    ++  + + I+DL TG+G   +  ALL +    K
Sbjct: 83  FINKDVLIPRNESELIIDHASEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172
            +  DIS KAL++A  N       ++F+   +   S + G F           ++I+ NP
Sbjct: 137 VILTDISYKALKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230
           PYI+ +    +   V DF+P I+L     GL  Y  +   + + L  NK+ L  +E G+ 
Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKILDTNKNFLIVLEFGWL 246

Query: 231 QK 232
           QK
Sbjct: 247 QK 248


>gi|269139791|ref|YP_003296492.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|267985452|gb|ACY85281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|304559657|gb|ADM42321.1| Ribosomal protein L3 methyltransferase [Edwardsiella tarda FL6-60]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+ ++   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPQAEVDAVDISSDVLAVTEHNIQQHGLEQQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 ELPPLRYDLIVTNPPYVDEEDMSDLPDEFR-HEPTLGLAAGSDGLKLVRRILACAPDYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            DG+   E+G N  V ++  + S   F+   F +  G D V +  R
Sbjct: 254 DDGVLICEVG-NSMVHLMAQYPSIP-FVWLEFDN--GGDGVFMLTR 295


>gi|170019361|ref|YP_001724315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ATCC 8739]
 gi|169754289|gb|ACA76988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli ATCC 8739]
          Length = 310

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|238788717|ref|ZP_04632509.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii
           ATCC 33641]
 gi|238723312|gb|EEQ14960.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii
           ATCC 33641]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|229846231|ref|ZP_04466343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 7P49H1]
 gi|229811235|gb|EEP46952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 7P49H1]
          Length = 314

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   +D+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 144 HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 203

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL+  + I      +L+
Sbjct: 204 NILGQKYDLIVTNPPYVDEEDLADMPEEFH-FEPELALGSGHDGLNITKQILKLAPNYLS 262

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
           ++G+   E+G N  V ++  +
Sbjct: 263 ENGVLVCEVG-NSMVSLIEQY 282


>gi|227887390|ref|ZP_04005195.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia
           coli 83972]
 gi|300983554|ref|ZP_07176648.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 45-1]
 gi|301049089|ref|ZP_07196073.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 185-1]
 gi|227835740|gb|EEJ46206.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia
           coli 83972]
 gi|300299136|gb|EFJ55521.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 185-1]
 gi|300408516|gb|EFJ92054.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 45-1]
 gi|307554392|gb|ADN47167.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli ABU 83972]
 gi|315292263|gb|EFU51615.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 153-1]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|323168496|gb|EFZ54176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella sonnei 53G]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|191169919|ref|ZP_03031473.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli F11]
 gi|300986871|ref|ZP_07177853.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 200-1]
 gi|331647987|ref|ZP_08349079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M605]
 gi|190909435|gb|EDV69020.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli F11]
 gi|281179417|dbj|BAI55747.1| putative adenine-specific methylase [Escherichia coli SE15]
 gi|300306360|gb|EFJ60880.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 200-1]
 gi|324015380|gb|EGB84599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 60-1]
 gi|330912149|gb|EGH40659.1| ribosomal protein L3 methyltransferase [Escherichia coli AA86]
 gi|331043711|gb|EGI15849.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M605]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|15612065|ref|NP_223717.1| protoporphyrinogen oxidase [Helicobacter pylori J99]
 gi|4155582|gb|AAD06575.1| PROTOPORPHYRINOGEN OXIDASE [Helicobacter pylori J99]
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 25/230 (10%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           RFF    + + L    I  +LG  DFY     ++     PRPETE+LV  AL      I 
Sbjct: 55  RFF--ELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALNI----IS 108

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  +  I ++G G+G V ++L  E+P       DIS KALE+A  N     + ER    Q
Sbjct: 109 QYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPKALEVALKNIERFCLKERVFLKQ 168

Query: 155 SDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           +  +  +  + +++VSNPPYI      E  ++          +P  +L GG+ G    + 
Sbjct: 169 TRLWDHMPTI-EMLVSNPPYIARNYPLEKSVLK---------EPHEALFGGVKGDEILKE 218

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           I    ++   K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 219 IVFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B7A]
 gi|194436322|ref|ZP_03068424.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli 101-1]
 gi|209919830|ref|YP_002293914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SE11]
 gi|218695929|ref|YP_002403596.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|253772746|ref|YP_003035577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162339|ref|YP_003045447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|256017512|ref|ZP_05431377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|260856374|ref|YP_003230265.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|260869052|ref|YP_003235454.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300822206|ref|ZP_07102348.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 119-7]
 gi|300903722|ref|ZP_07121637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 84-1]
 gi|300922056|ref|ZP_07138198.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 182-1]
 gi|301304873|ref|ZP_07210977.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 124-1]
 gi|301328836|ref|ZP_07221878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 78-1]
 gi|309793214|ref|ZP_07687642.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 145-7]
 gi|312973409|ref|ZP_07787581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1827-70]
 gi|331669030|ref|ZP_08369878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA271]
 gi|331678277|ref|ZP_08378952.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H591]
 gi|190904402|gb|EDV64110.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B7A]
 gi|194425050|gb|EDX41035.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli 101-1]
 gi|209913089|dbj|BAG78163.1| putative adenine-specific methylase [Escherichia coli SE11]
 gi|218352661|emb|CAU98442.1| N5-glutamine methyltransferase [Escherichia coli 55989]
 gi|242377963|emb|CAQ32732.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323790|gb|ACT28392.1| modification methylase, HemK family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974240|gb|ACT39911.1| N5-glutamine methyltransferase [Escherichia coli B str. REL606]
 gi|253978407|gb|ACT44077.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)]
 gi|257755023|dbj|BAI26525.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|257765408|dbj|BAI36903.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300404304|gb|EFJ87842.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 84-1]
 gi|300421556|gb|EFK04867.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 182-1]
 gi|300525336|gb|EFK46405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 119-7]
 gi|300839802|gb|EFK67562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 124-1]
 gi|300844785|gb|EFK72545.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 78-1]
 gi|308123500|gb|EFO60762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 145-7]
 gi|310332004|gb|EFP99239.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1827-70]
 gi|315255268|gb|EFU35236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 85-1]
 gi|320199921|gb|EFW74510.1| Ribosomal protein L3 methyltransferase [Escherichia coli EC4100B]
 gi|323156482|gb|EFZ42637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli EPECa14]
 gi|323176744|gb|EFZ62334.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1180]
 gi|323961403|gb|EGB57014.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489]
 gi|323970953|gb|EGB66204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007]
 gi|324020853|gb|EGB90072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 117-3]
 gi|324117792|gb|EGC11691.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167]
 gi|331064224|gb|EGI36135.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA271]
 gi|331074737|gb|EGI46057.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H591]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|313651155|gb|EFS15554.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2a str. 2457T]
 gi|332755380|gb|EGJ85744.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-671]
 gi|332756543|gb|EGJ86894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2747-71]
 gi|332766150|gb|EGJ96360.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2930-71]
 gi|333016296|gb|EGK35627.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-304]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|108563436|ref|YP_627752.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori HPAG1]
 gi|107837209|gb|ABF85078.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori HPAG1]
          Length = 274

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 76/160 (47%), Gaps = 24/160 (15%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  +LG  DFY     ++     PRPETE+LV  AL      I +  +  I ++G G+G 
Sbjct: 69  IEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGVGSGC 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V ++L  E+P       DIS KALE+A  N     + ER    Q+  +  +  + +++VS
Sbjct: 125 VSISLALENPKLSIHASDISLKALEVASKNIERFCLKERVFLKQTRLWDRMPTI-EMLVS 183

Query: 171 NPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202
           NPPYI            RD+        +P  +L GG+ G
Sbjct: 184 NPPYI-----------ARDYPLEKSVLKEPHEALFGGVKG 212


>gi|324009251|gb|EGB78470.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 57-2]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|306814558|ref|ZP_07448720.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|305851952|gb|EFM52404.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|300717709|ref|YP_003742512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
 gi|299063545|emb|CAX60665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L++   A  +P   K     ILD+ TG+G + +A     P  +   VDIS  A
Sbjct: 113 PRSPIGELINDRFAALIPDEPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDISTDA 168

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G++     +++D F  + +  +D+IV+NPPY++   +D L  E R  +P
Sbjct: 169 LAVTEQNIEAHGLTHSVTPIRADLFRELPKTPYDLIVTNPPYVDEDDMDDLPNEYR-HEP 227

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G DGL   R I      +L++ G+   E+G
Sbjct: 228 ELGLAAGRDGLKLARRILANAPDYLSEQGVLICEVG 263


>gi|325496630|gb|EGC94489.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ECD227]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|333002700|gb|EGK22260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-272]
 gi|333016583|gb|EGK35913.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-227]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|193062223|ref|ZP_03043318.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E22]
 gi|194429280|ref|ZP_03061807.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B171]
 gi|218548215|ref|YP_002382006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|218559243|ref|YP_002392156.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|260844918|ref|YP_003222696.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|300918497|ref|ZP_07135090.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 115-1]
 gi|331684003|ref|ZP_08384599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H299]
 gi|192931889|gb|EDV84488.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E22]
 gi|194412688|gb|EDX28983.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B171]
 gi|218355756|emb|CAQ88369.1| N5-glutamine methyltransferase [Escherichia fergusonii ATCC 35469]
 gi|218366012|emb|CAR03756.1| N5-glutamine methyltransferase [Escherichia coli S88]
 gi|257760065|dbj|BAI31562.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|294493265|gb|ADE92021.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli IHE3034]
 gi|300414311|gb|EFJ97621.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 115-1]
 gi|307626133|gb|ADN70437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|315288305|gb|EFU47704.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 110-3]
 gi|323162221|gb|EFZ48081.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli E128010]
 gi|323170399|gb|EFZ56052.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli LT-68]
 gi|323952123|gb|EGB47997.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252]
 gi|323955852|gb|EGB51607.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263]
 gi|324112867|gb|EGC06843.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii
           B253]
 gi|331078955|gb|EGI50157.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H299]
 gi|332754980|gb|EGJ85345.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 4343-70]
 gi|333001804|gb|EGK21370.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-218]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|13358170|ref|NP_078454.1| hypothetical protein UU004m [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971168|ref|ZP_02553445.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|168282012|ref|ZP_02689679.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|170761878|ref|YP_001752084.1| HemK family methyltransferase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|168827455|gb|ACA32717.1| methyltransferase, HemK family [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|182676092|gb|EDT87997.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700877|gb|EDU19159.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 290

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 11/215 (5%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RILG+  F   R  +  + F  R ETELL+D  +   + +     +  ++D+  G+G + 
Sbjct: 72  RILGYGYFCAKRFYVDKNVFAFRVETELLID--VVNKVIQQSTYKIKNVIDVCCGSGVLG 129

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVS 170
           L+            +DIS  A+   K NA  + +++         ++F + +  FD+I+ 
Sbjct: 130 LSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLTDVNFIHKSMQEYFLNTKKRFDLIIC 189

Query: 171 NPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           NPPYI+S     L  EV D+DP    I  D   DG+S Y  I + +    N+      EI
Sbjct: 190 NPPYIKSNYE--LNREVLDYDPINALIDFDHK-DGISFYLFIINNIKSIANEKFTIIFEI 246

Query: 228 GYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
           G++QK  + ++ +  +  L   F  DY    R+L+
Sbjct: 247 GFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILI 281


>gi|305681978|ref|ZP_07404782.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium matruchotii ATCC 14266]
 gi|305658451|gb|EFM47954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium matruchotii ATCC 14266]
          Length = 279

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 91/224 (40%), Gaps = 9/224 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  ILG   F  + LT+    F PRPETE L D    +    +       I
Sbjct: 59  ISRRAHREPLQHILGTAPFGPLTLTVGPGVFIPRPETEQLAD----WVATHLGNTPNPLI 114

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160
           +DL TG+GA+   L    P      V++S +AL    +N    GV+    D         
Sbjct: 115 IDLCTGSGAIADYLAHARPDANIYAVELSPEALTYTHTNLDPLGVTIIAGDATNPTLLEH 174

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G    +V+NPPY+       L  EV   DP +++ GG  G+     +     R L   
Sbjct: 175 LNGKATAVVTNPPYVPHTT--DLQPEVY-ADPPMAVFGGDTGMDVITRLIPTARRLLAPG 231

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR-VLLFC 263
           G+ + E       DVV++     L  V   +D+ G  R V   C
Sbjct: 232 GVFACEHDDTTGPDVVKLVAEAGLRQVTQHQDWAGQPRFVTAIC 275


>gi|157155888|ref|YP_001463675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli E24377A]
 gi|218690490|ref|YP_002398702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|218700806|ref|YP_002408435.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|293446667|ref|ZP_06663089.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|307311109|ref|ZP_07590753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli W]
 gi|309784960|ref|ZP_07679593.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 1617]
 gi|331673831|ref|ZP_08374594.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA280]
 gi|157077918|gb|ABV17626.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E24377A]
 gi|218370792|emb|CAR18605.1| N5-glutamine methyltransferase [Escherichia coli IAI39]
 gi|218428054|emb|CAR08973.2| N5-glutamine methyltransferase [Escherichia coli ED1a]
 gi|291323497|gb|EFE62925.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|306908615|gb|EFN39112.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli W]
 gi|308927330|gb|EFP72804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 1617]
 gi|315061623|gb|ADT75950.1| N5-glutamine methyltransferase [Escherichia coli W]
 gi|320196199|gb|EFW70823.1| Ribosomal protein L3 methyltransferase [Escherichia coli WV_060327]
 gi|323184350|gb|EFZ69726.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1357]
 gi|323377796|gb|ADX50064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli KO11]
 gi|331069104|gb|EGI40496.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA280]
 gi|333001475|gb|EGK21043.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri VA-6]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|323967772|gb|EGB63184.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863]
 gi|323977468|gb|EGB72554.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509]
 gi|327252601|gb|EGE64260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli STEC_7v]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|51596952|ref|YP_071143.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590234|emb|CAH21871.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
          Length = 333

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 158 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 217

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 218 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 276

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 277 DDGVLICEVG 286


>gi|22125479|ref|NP_668902.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis KIM 10]
 gi|45442202|ref|NP_993741.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|21958373|gb|AAM85153.1|AE013761_6 putative adenine-specific methylase [Yersinia pestis KIM 10]
 gi|45437066|gb|AAS62618.1| Predicted rRNA or tRNA methylase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 333

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 158 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 217

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 218 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 276

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 277 DDGVLICEVG 286


>gi|123441616|ref|YP_001005601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122088577|emb|CAL11372.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|307637738|gb|ADN80188.1| protoporphyrinogen oxidase [Helicobacter pylori 908]
 gi|325996339|gb|ADZ51744.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori 2018]
 gi|325997928|gb|ADZ50136.1| protoporphyrinogen oxidase [Helicobacter pylori 2017]
          Length = 276

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 102/237 (43%), Gaps = 27/237 (11%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L  ++       + + L    I  +LG  DFY     ++     PRPETE+LV  AL   
Sbjct: 48  LSHKEEVHFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              I +  +  I ++G G+G V ++L  E+P       DIS KALE+A  N     + ER
Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPKLCIHASDISPKALEVALKNIERFCLKER 163

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201
               Q+  +  +  + +++VSNPPYI            RD+        +P  +L GG+ 
Sbjct: 164 VFLKQTCLWDHMP-MIEMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVK 211

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G    + I    ++   K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 212 GDEILKEIIFLAAK--LKIPFLVCEMGYDQLKSLKECLEFCG-YNAEFYKDLSGFDR 265


>gi|310287871|ref|YP_003939129.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum S17]
 gi|309251807|gb|ADO53555.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum S17]
          Length = 329

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 14/234 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I G   F  + L +    F PRPETE +V + + + L R E+    RI
Sbjct: 98  IARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGIDW-LTR-ERLSTPRI 155

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFD 151
           +DL  G+GA+ L+L+ E    +   V+   +  +    N          A  N   E  D
Sbjct: 156 VDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISRLDPLAADNYHLELGD 215

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIA 210
                  +  +G  D++V+NPPYI    +     EVRD DP+ +L GG  DG      I 
Sbjct: 216 ATSGTTLAQFDGTIDMVVTNPPYIPEAQIPEQP-EVRDHDPKAALYGGSADGTLIPERIV 274

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +  L   G+  +E   +Q   +V   ++          D+ G  R L   R
Sbjct: 275 MRAAGLLRPGGVLVMEHDISQGPRLVSFAQANGFGQAYTGDDWTGRPRYLFAVR 328


>gi|297521848|ref|ZP_06940234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
          Length = 287

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|332162448|ref|YP_004299025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606536|emb|CBY28034.1| ribosomal protein L3 methyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325666678|gb|ADZ43322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|330861267|emb|CBX71515.1| uncharacterized adenine-specific methylase yfcB [Yersinia
           enterocolitica W22703]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|254480651|ref|ZP_05093898.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine gamma proteobacterium HTCC2148]
 gi|214039234|gb|EEB79894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine gamma proteobacterium HTCC2148]
          Length = 305

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 3/129 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL  G G + LA          +  D+   +L +AK N     +++R +  QSD F  
Sbjct: 135 ILDLCCGGGCIGLAAAHHGQASVDLA-DLDADSLALAKENRARLQLTDRVEIYQSDLFDE 193

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E  +D+I+SNPPY++S  +  +  E    +P +SL  G DGL+  R I    + +L++
Sbjct: 194 LPEKRYDLILSNPPYVDSADLASMPAEYH-HEPELSLGSGPDGLALTRRILSQAANYLHE 252

Query: 220 DGLCSVEIG 228
           DGL  VE+G
Sbjct: 253 DGLLVVEVG 261


>gi|292488901|ref|YP_003531788.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430]
 gi|292900045|ref|YP_003539414.1| methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291199893|emb|CBJ47017.1| putative methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291554335|emb|CBA21715.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +    ++ D F 
Sbjct: 135 HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQHVTPIRCDLFR 194

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            + +  +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R I    + +L+
Sbjct: 195 ELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLARRILGCAADYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G N  V ++  +     F    F++  G D V +  R
Sbjct: 254 EQGVLICEVG-NSMVHLINQYPDVP-FTWLEFEN--GGDGVFMLTR 295


>gi|289192702|ref|YP_003458643.1| methylase [Methanocaldococcus sp. FS406-22]
 gi|288939152|gb|ADC69907.1| methylase [Methanocaldococcus sp. FS406-22]
          Length = 197

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 16/163 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L L  + +EP  ++ LL+ +     L  ++ ++V   L++G GTG + +A  K+    
Sbjct: 8   IKLKLHPEVYEPAEDSILLLKN-----LVNVKNKEV---LEIGIGTGLISIACAKKGAK- 58

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K VGVDI+  A+++AK NA  N V   F   +SD F +V G FD+I+ NPPY+ +   D 
Sbjct: 59  KVVGVDINPYAVKLAKENAKLNNVDVLF--FESDLFENVNGKFDIILFNPPYLPTSEDDK 116

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +   +       + DGG DG          +  +L K G+  +
Sbjct: 117 INSYL-----NYAFDGGKDGREILDRFIYNLPNYLKKGGVAQI 154


>gi|15669118|ref|NP_247923.1| protoporphyrinogen oxidase HemK [Methanocaldococcus jannaschii DSM
           2661]
 gi|3024936|sp|Q58338|Y928_METJA RecName: Full=Putative protein methyltransferase MJ0928; AltName:
           Full=M.MjaHemkP
 gi|1591599|gb|AAB98930.1| protoporphyrinogen oxidase (hemK) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 197

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 20/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L L  + +EP  ++ LL+ +     L  ++ +DV   L++G GTG + +A  K+    
Sbjct: 8   IKLKLHPEVYEPAEDSILLLKN-----LVDVKNKDV---LEIGVGTGLISIACAKKGAK- 58

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K VGVDI+  A+++AK NA  N V+  F   +SD F +V G FDVI+ NPPY+ +     
Sbjct: 59  KIVGVDINPYAVKLAKENAKLNNVNISF--FESDLFENVTGKFDVILFNPPYLPTS---- 112

Query: 183 LGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              E    D  +  + DGG DG          +  +L K G+  +
Sbjct: 113 ---EDEKIDSYLNFAFDGGKDGREILDRFIYELPNYLKKGGVVQI 154


>gi|325002821|ref|ZP_08123933.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudonocardia sp. P1]
          Length = 291

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 20/263 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V+G S   +++ P  ++D      L   + R    E +  ILG      V +
Sbjct: 28  DAELLAAHVSGRSRSTLLLTP--LVDPGVVEELKVLVKRRAAREPLQHILGTAVLGPVEV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFK 123
            +    F PRPETELL +  L         RDV R  +LDL TG+GA+ LA     P   
Sbjct: 86  AVGPGVFTPRPETELLFEWGLG------ALRDVRRPVVLDLCTGSGALALAFAVSRPDAA 139

Query: 124 GVGVDISCKALEIAKSNAVTN-GVSERFDTLQS------DWFSSVEGLFDVIVSNPPYIE 176
              ++    AL   + N   + G   R  TL +      D    +EG  D++V NPPY+ 
Sbjct: 140 VHALEADPAALVWTRRNLDAHVGRGGRPVTLHAADVRWPDLLVELEGRVDLVVCNPPYVP 199

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 +  EV  +DP  ++ GG DG    + +  G +  L   G  ++E        V 
Sbjct: 200 DGT--PVPPEVERWDPPGAVFGGPDGTEIIQAVVRGATGWLRHGGALAIEHDDTHGDTVP 257

Query: 237 RIFESRK-LFLVNAFKDYGGNDR 258
            +   R+ L  V    D  G  R
Sbjct: 258 ALLRRRRTLAEVTEHTDLTGRPR 280


>gi|319760622|ref|YP_004124560.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia
           vafer str. BVAF]
 gi|318039336|gb|ADV33886.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia
           vafer str. BVAF]
          Length = 298

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 9/185 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKE 118
           F N+   +++  F PR     L+ S     LP   K     ILD+ TG+G + +A+ +  
Sbjct: 89  FCNLEFYVNNQVFIPRSPIGELIMSNFHDILPTPPKH----ILDMCTGSGCIAIAIAMIM 144

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
            P  +   VD+S KAL+IA+ N     +  +   + S+ F ++     +D+IV NPPY+ 
Sbjct: 145 YPHSEIDAVDLSIKALQIAEYNIKLYNLENQIIPIHSNLFKNIPKFKKYDLIVINPPYVN 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              + C   E    +P +SL    +GL     I   ++ +LN +G+   E+G N + ++ 
Sbjct: 205 KADI-CNLPEEYLHEPILSLSANCNGLEIIHQIFIQITDYLNTNGVLVCEVG-NTQNELK 262

Query: 237 RIFES 241
           + +E+
Sbjct: 263 KYYEN 267


>gi|294660261|ref|NP_852920.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)]
 gi|284811918|gb|AAP56488.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)]
 gi|284930382|gb|ADC30321.1| HemK-like methylase [Mycoplasma gallisepticum str. R(high)]
          Length = 284

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 20/192 (10%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR +T  +++  L     R   +D+V +LD+ TGTG + L + K+ P ++  G DIS  A
Sbjct: 94  PRIDTNAVIEKFLEVINSR---KDIVNVLDICTGTGLIALTIKKQFPKYQVFGSDISKSA 150

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           ++IA  NAV N +  RF   D L+   F  V    D ++ NPPY++  +      E+ ++
Sbjct: 151 VKIANFNAVNNLLDARFYVADYLEV--FEQVSEEIDALIINPPYLDEELKSNYIKEI-NY 207

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L     G   Y  I   ++ +  K  +  +E          RI+E      V   
Sbjct: 208 EPFNALFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFS-------ERIYEKT----VQLL 256

Query: 251 KDYGGNDRVLLF 262
           K YG  D+   F
Sbjct: 257 KKYGLYDKTTFF 268


>gi|187731589|ref|YP_001881152.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|194432949|ref|ZP_03065233.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella dysenteriae 1012]
 gi|312967630|ref|ZP_07781845.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 2362-75]
 gi|187428581|gb|ACD07855.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|194418937|gb|EDX35022.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella dysenteriae 1012]
 gi|312287827|gb|EFR15732.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 2362-75]
 gi|320174687|gb|EFW49820.1| Ribosomal protein L3 methyltransferase [Shigella dysenteriae CDC
           74-1112]
 gi|320183787|gb|EFW58621.1| Ribosomal protein L3 methyltransferase [Shigella flexneri CDC
           796-83]
 gi|323187945|gb|EFZ73240.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli RN587/1]
 gi|332090094|gb|EGI95193.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 155-74]
 gi|332093472|gb|EGI98530.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella boydii 3594-74]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|170681331|ref|YP_001744531.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218554885|ref|YP_002387798.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|218705860|ref|YP_002413379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|293405796|ref|ZP_06649788.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298381479|ref|ZP_06991078.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302]
 gi|300817463|ref|ZP_07097680.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 107-1]
 gi|300936910|ref|ZP_07151797.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 21-1]
 gi|301024163|ref|ZP_07187873.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 69-1]
 gi|331653775|ref|ZP_08354776.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M718]
 gi|331663848|ref|ZP_08364758.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA143]
 gi|170519049|gb|ACB17227.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218361653|emb|CAQ99249.1| N5-glutamine methyltransferase [Escherichia coli IAI1]
 gi|218432957|emb|CAR13851.1| N5-glutamine methyltransferase [Escherichia coli UMN026]
 gi|284922318|emb|CBG35403.1| putative methylase [Escherichia coli 042]
 gi|291428004|gb|EFF01031.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298278921|gb|EFI20435.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302]
 gi|300396707|gb|EFJ80245.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 69-1]
 gi|300458021|gb|EFK21514.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 21-1]
 gi|300530089|gb|EFK51151.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 107-1]
 gi|331048624|gb|EGI20700.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M718]
 gi|331059647|gb|EGI31624.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA143]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|289643111|ref|ZP_06475241.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
 gi|289507075|gb|EFD28044.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
          Length = 375

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 81/195 (41%), Gaps = 27/195 (13%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           +R  L   + R      +  ++G   F  + LT+    F PRPETE +V    A    R 
Sbjct: 101 ERELLHGLVARRAARVPLQHLVGTVGFRYLTLTVGPGVFVPRPETETVV--GWAIDTVRA 158

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV----------- 142
              D    +DL TG+GA+ LAL  E P  +   VD    AL  AK N V           
Sbjct: 159 AGWDRPVCVDLCTGSGAIALALADELPGARVYAVDSDPDALLWAKRNVVLTGRAITVHHA 218

Query: 143 ------TNGVSERFD--------TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
                 + G + R             ++  + + G  D++VSNPPY+       L  EV 
Sbjct: 219 DVGIDLSGGAASRHGGTPGAAGVMAATEVLADLLGRVDLVVSNPPYLCDDERGTLEPEVG 278

Query: 189 DFDPRISLDGGIDGL 203
           D DP  +L GG DGL
Sbjct: 279 DHDPPAALWGGPDGL 293


>gi|193069730|ref|ZP_03050681.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E110019]
 gi|192956932|gb|EDV87384.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E110019]
          Length = 310

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPESEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111419|ref|NP_416833.4| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157161819|ref|YP_001459137.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli HS]
 gi|170081946|ref|YP_001731266.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188493483|ref|ZP_03000753.1| methyltransferase, HemK family [Escherichia coli 53638]
 gi|238901505|ref|YP_002927301.1| N5-glutamine methyltransferase [Escherichia coli BW2952]
 gi|256021985|ref|ZP_05435850.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|300948520|ref|ZP_07162614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 116-1]
 gi|300956401|ref|ZP_07168692.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 175-1]
 gi|301023578|ref|ZP_07187342.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 196-1]
 gi|307138995|ref|ZP_07498351.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|331642972|ref|ZP_08344107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H736]
 gi|331658505|ref|ZP_08359449.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA206]
 gi|19859177|sp|P39199|YFCB_ECOLI RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|85675359|dbj|BAA16188.2| N5-glutamine methyltransferase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082085|gb|AAC75390.2| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157067499|gb|ABV06754.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli HS]
 gi|169889781|gb|ACB03488.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188488682|gb|EDU63785.1| methyltransferase, HemK family [Escherichia coli 53638]
 gi|238861843|gb|ACR63841.1| N5-glutamine methyltransferase [Escherichia coli BW2952]
 gi|260448576|gb|ACX38998.1| modification methylase, HemK family [Escherichia coli DH1]
 gi|299880813|gb|EFI89024.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 196-1]
 gi|300316750|gb|EFJ66534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 175-1]
 gi|300451930|gb|EFK15550.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 116-1]
 gi|309702641|emb|CBJ01970.1| putative methylase [Escherichia coli ETEC H10407]
 gi|315136965|dbj|BAJ44124.1| adenine-specific DNA-methyltransferase [Escherichia coli DH1]
 gi|315298134|gb|EFU57398.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 16-3]
 gi|315615599|gb|EFU96231.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 3431]
 gi|331039770|gb|EGI11990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H736]
 gi|331054170|gb|EGI26197.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA206]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|320178695|gb|EFW53658.1| Ribosomal protein L3 methyltransferase [Shigella boydii ATCC 9905]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|301647566|ref|ZP_07247363.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 146-1]
 gi|301074256|gb|EFK89062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 146-1]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|157415009|ref|YP_001482265.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385973|gb|ABV52288.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747647|gb|ADN90917.1| Putative DNA methylase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931924|gb|EFV10879.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 271

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 21/254 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ +   +   
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    DI
Sbjct: 82  VLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 136 NPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFLV 247
             +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+V
Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FIV 246

Query: 248 NAFKDYGGNDRVLL 261
           + FKD    +R  +
Sbjct: 247 DFFKDEQDYNRAFI 260


>gi|261340723|ref|ZP_05968581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cancerogenus ATCC 35316]
 gi|288317140|gb|EFC56078.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cancerogenus ATCC 35316]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 DLPTLQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILACAPDYLT 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            DG+   E+G N  V ++  +
Sbjct: 254 DDGVLICEVG-NSMVHLIEQY 273


>gi|311895758|dbj|BAJ28166.1| putative HemK homolog [Kitasatospora setae KM-6054]
          Length = 272

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            + +++G+ +F  +R+ L+   F PR  +E LV+ A A   P     D V +LDL  G+G
Sbjct: 62  PLEQVVGFAEFAGLRVALAPGVFVPRRRSEFLVERAAALGRP-----DAV-LLDLCCGSG 115

Query: 110 AVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           A+  AL        G GV++        A+  A+ N    G       L +     + G 
Sbjct: 116 AIGAALAAR----LGPGVELHAADVDPAAVACARRNLARYGGRVHLGDLDAPLPPGLLGR 171

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++++N PY+ +  +  L  E RD +P  +LDGG DGL+  R +A    R L   G   
Sbjct: 172 VDLLLANAPYVPTGEIPLLPPEARDHEPATALDGGADGLAVQRRVAAAAPRWLAPGGRLL 231

Query: 225 VEIGYNQ 231
           +E    Q
Sbjct: 232 IETSGRQ 238


>gi|108808088|ref|YP_652004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Antiqua]
 gi|108812358|ref|YP_648125.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|145599288|ref|YP_001163364.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides F]
 gi|149365224|ref|ZP_01887259.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis CA88-4125]
 gi|153947313|ref|YP_001400383.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 31758]
 gi|162420900|ref|YP_001604986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Angola]
 gi|165925296|ref|ZP_02221128.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937109|ref|ZP_02225674.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008087|ref|ZP_02228985.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214242|ref|ZP_02240277.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398823|ref|ZP_02304347.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421362|ref|ZP_02313115.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424480|ref|ZP_02316233.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167469289|ref|ZP_02333993.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis FV-1]
 gi|170023754|ref|YP_001720259.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis YPIII]
 gi|186896033|ref|YP_001873145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis PB1/+]
 gi|218929822|ref|YP_002347697.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis CO92]
 gi|229838317|ref|ZP_04458476.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229895347|ref|ZP_04510520.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Pestoides A]
 gi|229898882|ref|ZP_04514027.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229902717|ref|ZP_04517834.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Nepal516]
 gi|270490110|ref|ZP_06207184.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pestis KIM D27]
 gi|294504663|ref|YP_003568725.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
 gi|108776006|gb|ABG18525.1| hypothetical protein YPN_2196 [Yersinia pestis Nepal516]
 gi|108780001|gb|ABG14059.1| hypothetical protein YPA_2093 [Yersinia pestis Antiqua]
 gi|115348433|emb|CAL21369.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145210984|gb|ABP40391.1| hypothetical protein YPDSF_2010 [Yersinia pestis Pestoides F]
 gi|149291637|gb|EDM41711.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis CA88-4125]
 gi|152958808|gb|ABS46269.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
           31758]
 gi|162353715|gb|ABX87663.1| methyltransferase, HemK family [Yersinia pestis Angola]
 gi|165914972|gb|EDR33584.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922903|gb|EDR40054.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992469|gb|EDR44770.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204598|gb|EDR49078.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960851|gb|EDR56872.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051327|gb|EDR62735.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056362|gb|EDR66131.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750288|gb|ACA67806.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pseudotuberculosis YPIII]
 gi|186699059|gb|ACC89688.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pseudotuberculosis PB1/+]
 gi|229680164|gb|EEO76263.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Nepal516]
 gi|229688430|gb|EEO80501.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229694683|gb|EEO84730.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229701655|gb|EEO89681.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Pestoides A]
 gi|262362725|gb|ACY59446.1| hypothetical protein YPD4_2539 [Yersinia pestis D106004]
 gi|270338614|gb|EFA49391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pestis KIM D27]
 gi|294355122|gb|ADE65463.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
 gi|320014548|gb|ADV98119.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|86151737|ref|ZP_01069951.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|86153286|ref|ZP_01071490.1| methylase of polypeptide chain release factor [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|121613646|ref|YP_001000418.1| HemK family modification methylase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005360|ref|ZP_02271118.1| modification methylase, HemK family protein [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315124222|ref|YP_004066226.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841366|gb|EAQ58614.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85843012|gb|EAQ60223.1| methylase of polypeptide chain release factor [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87249539|gb|EAQ72499.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315017944|gb|ADT66037.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 271

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ D  +D    F     ++R  K  E    I    DF+ +   +  
Sbjct: 25  LCEYLKKDKAWLFLNQDIQIDHEPYF----ELIRRFKSGEPFEYIFEKVDFWGLEFKIKK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVD 128
               PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    D
Sbjct: 81  GVLIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACD 134

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEV 187
           I+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    + 
Sbjct: 135 INPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK- 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P+ +L GG  G   Y  + + +   L+K     + E GY+QK  + +I      F+
Sbjct: 193 ---EPKEALFGGEKG---YEILEEIIHFSLDKKVKFLACEFGYDQKEILEKILYQNN-FI 245

Query: 247 VNAFKDYGGNDRVLL 261
           V+ FKD    +R  +
Sbjct: 246 VDFFKDEQDYNRAFI 260


>gi|206577308|ref|YP_002237272.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Klebsiella pneumoniae 342]
 gi|238895851|ref|YP_002920587.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae NTUH-K2044]
 gi|288934208|ref|YP_003438267.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Klebsiella variicola At-22]
 gi|206566366|gb|ACI08142.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Klebsiella pneumoniae 342]
 gi|238548169|dbj|BAH64520.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|288888937|gb|ADC57255.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Klebsiella variicola At-22]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N  ++G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E  + +P + L  G DGL   R I      +L+
Sbjct: 195 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGILICEVG 263


>gi|290508411|ref|ZP_06547782.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Klebsiella sp. 1_1_55]
 gi|289777805|gb|EFD85802.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Klebsiella sp. 1_1_55]
          Length = 334

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N  ++G+      ++SD F 
Sbjct: 159 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 218

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E  + +P + L  G DGL   R I      +L+
Sbjct: 219 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 277

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 278 DDGILICEVG 287


>gi|152971258|ref|YP_001336367.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|262043379|ref|ZP_06016505.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|329997371|ref|ZP_08302754.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Klebsiella sp. MS 92-3]
 gi|150956107|gb|ABR78137.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259039260|gb|EEW40405.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328539120|gb|EGF65156.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Klebsiella sp. MS 92-3]
          Length = 334

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N  ++G+      ++SD F 
Sbjct: 159 HILDMCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEHNVESHGLIHHVTPIRSDLFR 218

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D+IV+NPPY++   +  L  E  + +P + L  G DGL   R I      +L+
Sbjct: 219 DLPKLQYDLIVTNPPYVDEEDMADLP-EEYEHEPVLGLASGSDGLKLTRRILGNAPDYLS 277

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 278 DDGILICEVG 287


>gi|134100236|ref|YP_001105897.1| HemK family modification methylase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291006541|ref|ZP_06564514.1| HemK family modification methylase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133912859|emb|CAM02972.1| modification methylase, HemK family [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 274

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 85/207 (41%), Gaps = 6/207 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R      +  +LGW +F + R+ +    F PR  T+ L   A   + P      
Sbjct: 42  LDEMVARRAAGLPLEHVLGWAEFCHQRIAVDPGVFVPRRRTQHLARQAADLTRPH----- 96

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  GTGAV  AL    P  +    DI   A+  A+ N    G       L    
Sbjct: 97  -AVVVDLCCGTGAVGAALAAAHPGTELHAADIDPAAVRCARRNLEPAGGQVHHGDLYEPL 155

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +++ G  D++V+N PY+ +  +D L  E R  +PR +LDGG DGL   R +       L
Sbjct: 156 PTALRGRIDILVANTPYVPTDALDLLPPEARIHEPRHALDGGGDGLDVQRRVTAQAPAWL 215

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
              G   +E    Q  +    F    L
Sbjct: 216 APGGHLLIETSTEQAPEAAATFARHGL 242


>gi|168308159|ref|ZP_02690834.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|171902800|gb|EDT49089.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
          Length = 290

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 11/215 (5%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RILG+  F   R  +  + F  R ETELL+D  +   + +     +  ++D+  G+G + 
Sbjct: 72  RILGYGYFCAKRFYVDKNVFAFRVETELLID--VVNKVIQQSTYKIKNVIDVCCGSGVLG 129

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVS 170
           L+            +DIS  A+   K NA  + ++          ++F + +  FD+I+ 
Sbjct: 130 LSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLTNVNFIHKSMQEYFLNTKKRFDLIIC 189

Query: 171 NPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           NPPYI+S     L  EV D+DP    I  D   DG+S Y  I + +    N+      EI
Sbjct: 190 NPPYIKSNYE--LNREVLDYDPINALIDFDHK-DGISFYLFIINNIKSIANEKFTIIFEI 246

Query: 228 GYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLL 261
           G++QK  + ++ +  +  L   F  DY    R+L+
Sbjct: 247 GFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILI 281


>gi|322491043|emb|CBZ26307.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 514

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 39/167 (23%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------D 97
           H+ +  I+G + F+   +   +    PRPETE+     +   L R E+            
Sbjct: 243 HKPLSYIIGSQPFFGCDIHCEAPLLCPRPETEMWTHWMVYSYLARAERSITATDLSPAVS 302

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
            +RILD+  GTG + +AL K         +DI  +A+ +++ NA+ NG+S ER+  ++SD
Sbjct: 303 PMRILDVCCGTGCIGVALAKHLSSAVVTALDILPEAVRVSRENAMRNGISPERYTAMESD 362

Query: 157 WFS----------------------------SVEGLFDVIVSNPPYI 175
            FS                            +  G +DVIVSNPPY+
Sbjct: 363 MFSCFLEEPVPAQQGDSAHLSEDRPLGTVNDAYAGTYDVIVSNPPYV 409


>gi|238920643|ref|YP_002934158.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella ictaluri 93-146]
 gi|238870212|gb|ACR69923.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella ictaluri 93-146]
          Length = 310

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+ ++   ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPQAEVDAVDISSDVLAVTEHNIQQHGLEQQVTPIRSDLFRE 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  L +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPPLRYDLIVTNPPYVDEEDMSDLPDEFR-HEPALGLAAGSDGLKLVRRILACAPDYLSD 254

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 255 DGVLICEVG 263


>gi|93006460|ref|YP_580897.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter cryohalolentis K5]
 gi|92394138|gb|ABE75413.1| modification methylase, HemK family [Psychrobacter cryohalolentis
           K5]
          Length = 391

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDL TG+G  C+A+   + F   +   VDI   ALE+A  N   + +  + + ++SD 
Sbjct: 209 RILDLCTGSG--CIAIALATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDL 266

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F+ +  E  +++IV+NPPY+++ I+  L  E   ++P  +L  G DGL     I      
Sbjct: 267 FAKIPAENQYELIVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPD 325

Query: 216 HLNKDGLCSVEIG 228
           +L+ +GL   E+G
Sbjct: 326 YLSPEGLLVCEVG 338


>gi|237752964|ref|ZP_04583444.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375231|gb|EEO25322.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430]
          Length = 285

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 25/227 (11%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R + +E I  ++    FY   L +S     PRPETE+L++  L      I  +D   I +
Sbjct: 66  RRVNYEPIEYLIEKVSFYGEELYVSYGALIPRPETEILLEKTLEL----IVSKDCKNIAE 121

Query: 104 LGTGTGAVCLAL------LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +G G+GA+ + L      LK          DIS +AL     NA  N    +   L    
Sbjct: 122 IGVGSGAISVLLAYLSKGLKSDSNLSFHASDISPEAL----FNACVNREKFKVKNLSLHL 177

Query: 158 -----FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
                F+   G+ FD++VSNPPYI+   +    L    ++P+ +L GG+ G      I D
Sbjct: 178 SAYLDFNVKLGINFDILVSNPPYIKEGEMLPKSL---SYEPQKALFGGVRGDEMLLNIID 234

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              +      LC  E+GY+QK  V    ++     V  +KD  G DR
Sbjct: 235 LAQKFKIPYLLC--EMGYDQKESVKAHLKNTPHKSVEFYKDLAGLDR 279


>gi|89898159|ref|YP_515269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila felis Fe/C-56]
 gi|89331531|dbj|BAE81124.1| tRNA/rRNA methyltransferase [Chlamydophila felis Fe/C-56]
          Length = 283

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 118/262 (45%), Gaps = 16/262 (6%)

Query: 5   RDSHSFLCRVTGLSSH----QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           R++   L    G+SS      V++D DS+    +R     A V +     IH   G   F
Sbjct: 24  REASDILMDFLGISSRAQLASVVLDADSLETYWKRVQQRAARVPT---SYIH---GSVSF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             + L + S    PR ETELL +  + +     +   +    D+  G+G + L++ K  P
Sbjct: 78  LGLHLDVDSRVLIPRMETELLAERIIKY---LTQHPHIRTFYDVCCGSGCLGLSVKKYCP 134

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  DI  KA+ +AK+NA  N +  + + L  D FS      D  V NPPY+    +
Sbjct: 135 EIQVVLSDICPKAVAVAKANASINNL--KVEILLGDLFSPYSYPADAFVCNPPYLSFSEI 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EVR  +P  +L GG  G+  Y  IA  +   L   G+  +EIGY Q   + +IF 
Sbjct: 193 MYVDPEVRCHEPWKALVGGSSGVEFYERIAQDLDLVLCPGGVGWLEIGYRQGELIKKIFA 252

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
            R +     ++D  G DR+   
Sbjct: 253 GRGVS-GTIYQDLSGCDRIFFL 273


>gi|300897013|ref|ZP_07115492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 198-1]
 gi|300359194|gb|EFJ75064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 198-1]
          Length = 311

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|59712413|ref|YP_205189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio fischeri ES114]
 gi|197335265|ref|YP_002156633.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio fischeri MJ11]
 gi|59480514|gb|AAW86301.1| N5-glutamine methyltransferase [Vibrio fischeri ES114]
 gi|197316755|gb|ACH66202.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio fischeri MJ11]
          Length = 310

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ ++   ++SD  
Sbjct: 134 TRIMDLCTGSGCIAIACAHAFPNAEVDAIDISTDALMVAEQNVQDHGMEQQVFPIRSDLL 193

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             + +  ++ IVSNPPY++   ++ L  E  + +P + L  G DGL   R I      +L
Sbjct: 194 RDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLKLVRRILANAPDYL 252

Query: 218 NKDGLCSVEIG 228
             +G    E+G
Sbjct: 253 MDNGFLICEVG 263


>gi|19115895|ref|NP_594983.1| mitochondrial S-adenosylmethionine-dependent methyltransferase
           (possibly N(5)-glutamine) [Schizosaccharomyces pombe
           972h-]
 gi|74581943|sp|O14028|MTQ1_SCHPO RecName: Full=Probable mitochondrial N(5)-glutamine
           methyltransferase mtq1
 gi|2408047|emb|CAB16250.1| mitochondrial S-adenosylmethionine-dependent methyltransferase
           (possibly N(5)-glutamine) [Schizosaccharomyces pombe]
          Length = 309

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 19/248 (7%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  + NA     ++  +  IL  + F N+++        PR ETE  V+  +   L R+E
Sbjct: 55  RKKIVNACQLRARNYPLQYILKSQPFGNIKIDCQQGVLIPRWETEEWVERVVD-KLNRLE 113

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSN---AVTNGVSERF 150
           +   ++ILDL TG+G +   +L        +  VD+S KAL++A  N   A+ +G   + 
Sbjct: 114 RLKPLKILDLCTGSGCISSFVLANLRVPHTIEAVDVSKKALKLAVKNCDRAIAHGTVGKI 173

Query: 151 DTLQSDWFSS---VEGLFD---VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  Q D  +    VE L     V++ NPPYI +        + VR ++P+++L     G 
Sbjct: 174 NFHQIDVLNEHERVESLLQTSHVLLCNPPYISDDDFAAQTDISVRKYEPKLALLAKNGGN 233

Query: 204 SHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
             Y   +  + R L ++        L   EIG   +  +V+       +  N  +D    
Sbjct: 234 EFYYKFSQYIKRMLQRNAKDFVPLSLIVFEIGSTHQAKIVKSLFDDTNWQANIEQDGAHQ 293

Query: 257 DRVLLFCR 264
           DRV++  R
Sbjct: 294 DRVVIITR 301


>gi|213420560|ref|ZP_03353626.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 191

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 27  ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 86

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 87  LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 145

Query: 220 DGLCSVEIG 228
           DG+   E+G
Sbjct: 146 DGVLICEVG 154


>gi|315657281|ref|ZP_07910163.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491753|gb|EFU81362.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 290

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 16/237 (6%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           QRFF    + +      +  ++G   F ++ L      F  RPETE +   A+  +   +
Sbjct: 56  QRFF--ELVGQRATRVPLQHVMGIMYFRHLTLHARPGVFVVRPETEWVAQGAIDAAADWV 113

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--- 150
            +    R+LDLG G+GA+ L++  E        VD+S  A+E+   NA   GV+ R    
Sbjct: 114 RQGVAPRVLDLGCGSGALGLSIASEVHQSVLTCVDVSEAAVELTAENARFTGVAARVLLT 173

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                 TL++    + +   F VI +NPPY    +VD +       DP+++L  GG DGL
Sbjct: 174 DATDPQTLRNALVQAEIPPQFHVIATNPPY----VVDPVTQPEAAQDPQLALYGGGTDGL 229

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              R                 +E   +Q   +V+  E+  L       D  G  R L
Sbjct: 230 ERPRAFLAAAVAVALPGATIVMEHAESQGEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|307564990|ref|ZP_07627507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella amnii CRIS 21A-A]
 gi|307346303|gb|EFN91623.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella amnii CRIS 21A-A]
          Length = 286

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 8/212 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS   +++   + L   Q   L   I R    E +  +LG   F      + S    PR
Sbjct: 32  NLSFADILIGKVNELSQEQLLKLEELIRRIESFEPVQYVLGKETFLGRSFHVRSGVLIPR 91

Query: 76  PETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PETE+LV+        +   +   + ++ILD+GTG+G + + L  + P       DIS +
Sbjct: 92  PETEVLVEWVKEDCCTTACNLLDSNNIKILDIGTGSGCIAITLSLDIPHSNVTAWDISKE 151

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           AL IAK NA  + +  + +    D F  +  E  ++VI+SNPPYI       +   V   
Sbjct: 152 ALLIAKENA--SALKGKVNFRLQDVFNVNVSERKWNVIISNPPYICCKEHTSMSDNVLKH 209

Query: 191 DPRISL-DGGIDGLSHYRTIADGVSRHLNKDG 221
           +P I+L     D L  YR IA+     L K G
Sbjct: 210 EPHIALFVPDDDPLRFYRAIANIGKSALIKGG 241


>gi|238764945|ref|ZP_04625883.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii
           ATCC 33638]
 gi|238696804|gb|EEP89583.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii
           ATCC 33638]
          Length = 310

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPDEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|146342880|ref|YP_001207928.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium sp. ORS278]
 gi|146195686|emb|CAL79713.1| putative adenine-specific methylase [Bradyrhizobium sp. ORS278]
          Length = 325

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 6/134 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG+G  CLA+L    F   V   VDIS  AL +A  N     + ER    + D F
Sbjct: 162 VLDLCTGSG--CLAILASRHFPNAVIDAVDISKDALAVAARNVADYELGERISLHRGDLF 219

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + + +  +D+I++NPPY+++  +  L  E R  +P ++ DGG DGL     I      HL
Sbjct: 220 APLSQRRYDLIITNPPYVDAEGMAGLPRECR-AEPALAFDGGADGLDIIHRIIGEARDHL 278

Query: 218 NKDGLCSVEIGYNQ 231
             +G    E+G ++
Sbjct: 279 TAEGGLLCEVGRDR 292


>gi|85059606|ref|YP_455308.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Sodalis glossinidius str. 'morsitans']
 gi|84780126|dbj|BAE74903.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 310

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+ TG+G + +A     P  +   VDI+   L +A+ N   +GV +R   + SD F 
Sbjct: 135 HLLDMCTGSGCIAVACAYTYPEAEVDAVDIAPGVLAVAEHNIQAHGVEQRVTPILSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  L +D I++NPPY++   ++ L  E    +P + L  G DGL   R I      +L+
Sbjct: 195 DLPPLAYDAIITNPPYVDEEDMNDLPAEFHA-EPVLGLAAGSDGLKLVRRILAYAPDYLS 253

Query: 219 KDGLCSVEIGYNQKVDVV 236
           +DG+   E+G N  V +V
Sbjct: 254 EDGVLICEVG-NSMVHLV 270


>gi|195343026|ref|XP_002038099.1| GM17937 [Drosophila sechellia]
 gi|194132949|gb|EDW54517.1| GM17937 [Drosophila sechellia]
          Length = 298

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S  Q+ ++P   L D +RF         L+H     I+G  DF ++ L  S   F PRPE
Sbjct: 76  SYDQLQLNPGQ-LADLERFLEARCARMPLQH-----IIGEWDFMDITLKTSPSVFIPRPE 129

Query: 78  TE----LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           TE    L++D          +    V +L++G G+GA+ L++L   P      ++ S  A
Sbjct: 130 TEEFMRLVIDDH--------KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIERSKAA 181

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             +A  NA   G+  RF+            + +  +    Y+  V+ D      ++++  
Sbjct: 182 TVLAAENAKMLGLLNRFE------------VHNHTMEEDKYLPEVLKD------KNYENL 223

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVNA 249
            +LDGG DGL   R + D   RHL   G   +E+G +    V  I    +E R  F+   
Sbjct: 224 NALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLKFIAGY 283

Query: 250 FKDY 253
              Y
Sbjct: 284 SDQY 287


>gi|119963466|ref|YP_948326.1| HemK family modification methylase [Arthrobacter aurescens TC1]
 gi|119950325|gb|ABM09236.1| putative modification methylase, HemK family [Arthrobacter
           aurescens TC1]
          Length = 290

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 16/216 (7%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDVVRILDLG 105
            +  I G   F ++ L +    F PRPETE    L++D       P++        +DLG
Sbjct: 73  PLQHITGVAYFRHLELCVGPGVFIPRPETESVVQLVIDHVAGVPTPKV--------VDLG 124

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+  ++  E P  +   V+ S  A   A  N    GV+     L+ D      G F
Sbjct: 125 TGSGAIAGSIAHEVPGAEVHAVEFSTFAHAWAAKNLEPLGVTLVQGDLR-DALPEHNGTF 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           DV+VSNPPYI S  +     EV   DP  +L  GG DG+      A   +R L   G   
Sbjct: 184 DVVVSNPPYIPSEAIPTE-PEVALHDPPEALYGGGADGMVLPTAAAASAARLLKPGGFFV 242

Query: 225 VEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRV 259
           +E    Q V +  + E + +   V    D  G +R 
Sbjct: 243 MEHAEVQAVWIAGMLERTGRWNNVTTHCDLNGKERA 278


>gi|293410687|ref|ZP_06654263.1| hypothetical protein ECEG_01659 [Escherichia coli B354]
 gi|291471155|gb|EFF13639.1| hypothetical protein ECEG_01659 [Escherichia coli B354]
          Length = 314

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 139 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 198

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 199 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAADYLA 257

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 258 DDGVLICEVG 267


>gi|325963839|ref|YP_004241745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469926|gb|ADX73611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 295

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSLPRIEKRDVVRILDLG 105
            +  I G   F  ++L +    F PRPETE    L++D       PRI        +DLG
Sbjct: 73  PLQHITGVAHFRYLQLAVGPGVFIPRPETESVVQLVIDHVQGLPHPRI--------VDLG 124

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+GA+  +L  E P  +   V+ S  A   A  N    GV      L+ +    + G F
Sbjct: 125 TGSGAIAGSLAHEVPGAEVHAVEFSPFAHAWAAKNLAPLGVHLVQGDLR-NALPELNGTF 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
           DV+VSNPPYI +  +     EV   DP  +L  GG DG+
Sbjct: 184 DVVVSNPPYIPAEAIPHE-PEVALHDPPEALYGGGADGM 221


>gi|215487543|ref|YP_002329974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|215265615|emb|CAS10018.1| N5-glutamine methyltransferase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 310

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLVSGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|229818481|ref|ZP_04448762.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM
           20098]
 gi|229784351|gb|EEP20465.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM
           20098]
          Length = 318

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C ++ +    ++ DP  +  D +RF     + R    E +  I+G   F  + L +    
Sbjct: 59  CELSDVDKAMLMGDP--IDYDAERFGAM--LARRANREPLQYIVGHAPFRYLDLEVGPGV 114

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F PR ETEL+    + +    I +  +   R++DL  G+GA+ L+++ E P     GV+I
Sbjct: 115 FIPRQETELVAQEGIDW----ITRNGLYNPRVVDLCAGSGAIGLSIVTEVPGSHVWGVEI 170

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW------------FSSVEGLFDVIVSNPPYI-E 176
           + +A    + N        R+  L S++             + ++G  D++++NPPY+ +
Sbjct: 171 NQQAAAWTRRNIAA--TMRRWPALASNYELEIGDATNATTLAKLDGSIDMVITNPPYVPQ 228

Query: 177 SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           + I D    EVRD DP ++L GG  DG      I    SR L    L  +E   +Q   +
Sbjct: 229 NNIPDQ--PEVRDHDPELALYGGSADGTLIPERIIRRASRLLRAQALFVMEHDISQGDRL 286

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                      V+   DY    R L+  +
Sbjct: 287 TAFARINGFEQVHVRNDYTNRPRYLVAVK 315


>gi|262341100|ref|YP_003283955.1| putative methyltransferase small domain protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
 gi|262272437|gb|ACY40345.1| putative methyltransferase small domain protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
          Length = 299

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 11/192 (5%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K+  I  ++G   F+ +   ++   F PRPETE LV   L  +  + +    V+I D+GT
Sbjct: 71  KNRPIQYVIGKAYFFGMEFIVNEKVFIPRPETEELVYWILQDN--KNKNTSKVQIFDIGT 128

Query: 107 GTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWF--SS 160
           G+G + +AL K+ P  + V  +D   + L+IA+ NA  + V    ++ D L+   F    
Sbjct: 129 GSGCISIALKKKKPEMEHVYAIDSYQETLDIARKNAELHNVEISFKKVDILKDSIFIPKM 188

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNK 219
            +    +IVSNPPY+       L   +  ++P  +L     D L  Y+ I+  + + L  
Sbjct: 189 NKNSVSIIVSNPPYVRLSEKKLLHPNIIQYEPFQALFVPDEDPLIFYKKISFWIQKKLT- 247

Query: 220 DGLCSVEIGYNQ 231
            G+  V    NQ
Sbjct: 248 -GVVYVYFEINQ 258


>gi|224065793|ref|XP_002189936.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Taeniopygia guttata]
          Length = 305

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 22/150 (14%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV------------DSALAFSLP 91
           + L+   +  +LG  DF ++ L +    F PRPETE LV            +S L F +P
Sbjct: 65  KRLQRMPVQYVLGEWDFQDLTLKMRPPVFIPRPETEDLVSLVVEEEFQKCENSTLCFPVP 124

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    IL++G G+GA+ L+LL + P  + + +D    A+++ + NA    + ER  
Sbjct: 125 VPHPV----ILEIGCGSGAIALSLLCKLPQSRVIAMDKEEAAVDLTRENAHRLQLQERIR 180

Query: 152 TLQSDWFSS------VEGLFDVIVSNPPYI 175
            +  D   S      + G  DVIVSNPPY+
Sbjct: 181 IIHQDVSHSSAKQLLLWGPIDVIVSNPPYV 210


>gi|332978419|gb|EGK15136.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp.
           1501(2011)]
          Length = 402

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 7/133 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDL TG+   C+A+   S F   +    DI   ALE+A  N   +G+  + + ++SD 
Sbjct: 222 RILDLCTGSA--CIAIALASRFRDALVDAADIDTSALEVAAVNVEHHGMEHQLNLIESDL 279

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F  +  E  +++IV+NPPY+++  +  L  E    +P  +L  G DGL     I +  + 
Sbjct: 280 FDKIPAENQYELIVTNPPYVDAAAMAELPPEFI-HEPEHALAAGQDGLDLVHKILNEAAD 338

Query: 216 HLNKDGLCSVEIG 228
           +L+ +GL   E+G
Sbjct: 339 YLSPEGLLVCEVG 351


>gi|225350886|ref|ZP_03741909.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158342|gb|EEG71584.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 307

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 22/232 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRI 101
           R  K E +  I G   F  + L +    F PR ETEL+V   + +    I K  +   ++
Sbjct: 78  RRSKREPLQHITGHAPFRYLDLKVGPGVFIPRQETELVVQEGVDW----ITKHGMYSAKV 133

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---- 157
           +DL  G+GA+ L+ + E P  +   V+ S +  +  + N   N  ++++ ++ S++    
Sbjct: 134 VDLCAGSGAIGLSFVTEVPGSEVWAVEKSEQTAQWTRVN--LNETAKKYPSIASNYHLEI 191

Query: 158 --------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRT 208
                    + ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      
Sbjct: 192 ADATQTPTLNQLDGTIDIVLTNPPYVPLADIPQQP-EVRDYDPDLALYGGSADGTLIPER 250

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           I    ++ L   GL  +E    Q   +     S     V    DY G  R +
Sbjct: 251 IIARAAKLLKNGGLLVMEHDITQGERLSAFALSYGFSNVMVHNDYTGRPRYM 302


>gi|320096083|ref|ZP_08027683.1| HemK family modification methylase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976963|gb|EFW08706.1| HemK family modification methylase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 293

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 15/261 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           + C    L S   ++ P+ V    +R  L  A+    +   +  I G   F ++ L  + 
Sbjct: 37  WACGADSLWSAPPLLAPEEV----ER--LRGAVSARARRVPLQHITGRMHFRSLALRAAP 90

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             F  RPETE +  +A+  +   + +R    ++DL +G+GA+ +A+  E P  +   V+ 
Sbjct: 91  GVFVVRPETECVAQAAIDRARTAVGRRGSATVVDLCSGSGAIAIAVATEVPGCRVWAVEA 150

Query: 130 SCKALEIAKSN--AVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
              A  +A SN  A+  G  E    D       + ++G  DV+VSNPPY+ +   D +  
Sbjct: 151 DEAAARLAASNIGALAPGRVELLLADATDGAALAHLDGSADVVVSNPPYVPA---DEMPD 207

Query: 186 EVRDF-DPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +     DP  +L GG  DG +  R +A      L   G   +E   +Q   + R  ES  
Sbjct: 208 QPEALADPAGALYGGSPDGTAVPRLVARRALGLLAPGGALVMEHSPSQSAAMRRAAESLG 267

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
               +  +D  G DR L+  R
Sbjct: 268 YCCASTHRDLAGRDRYLVAER 288


>gi|88799004|ref|ZP_01114585.1| modification methylase, HemK family protein [Reinekea sp. MED297]
 gi|88778231|gb|EAR09425.1| modification methylase, HemK family protein [Reinekea sp. MED297]
          Length = 313

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 6/170 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +    ++SD   PR     L+++     L    +R    +LDL TG+G + +A+ +  
Sbjct: 104 FCHEPFYVTSDVLIPRSPIAELIEARFEPWLSSAPQR----LLDLCTGSGCIGIAMARVF 159

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
           P       D+S  A+ IA SN     +  + +  Q D F  + +  +D+IVSNPPY+++ 
Sbjct: 160 PEALVDLSDLSDSAVHIATSNVAQKDLEYQVNAYQGDLFDGLPQTRYDLIVSNPPYVDAE 219

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +D +  E    +PR+ L  G DGL   R I       L +DG    E+G
Sbjct: 220 DIDDMPAEF-SHEPRLGLAAGGDGLDIVRRILSQAPDFLTEDGWLVCEVG 268


>gi|325295295|ref|YP_004281809.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065743|gb|ADY73750.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 249

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 8/83 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ----- 154
           +I+DLGTG G + + LLK+ P  K   +D+  + + I+K N   NGVSERF  L      
Sbjct: 47  KIIDLGTGCGVIPILLLKKYPQLKAFAIDVLEENINISKKNGEINGVSERFTALHLNVKE 106

Query: 155 -SDWFSSVEGLFDVIVSNPPYIE 176
               F S  G FD++++NPP+IE
Sbjct: 107 VKKVFKS--GEFDIVITNPPFIE 127


>gi|332675655|gb|AEE72471.1| protein methyltransferase HemK [Propionibacterium acnes 266]
          Length = 245

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 8/168 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           DD  RF     + R    E    I+G   F  +RL +    F PR ETEL+ + ++  + 
Sbjct: 7   DDEDRF--NQMVDRRRSGEPAQYIIGHAWFRGLRLEVGPGVFIPRLETELVAEQSIQEAR 64

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +       ++DL TGTGA+ LA+  E P  +   V++   AL   + N   +GV    
Sbjct: 65  RLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVSAVEVDDAALTWTRRNLCDSGV---- 120

Query: 151 DTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           + L  D     +    FDV+V+NPPY+    V  +  EV + +P ++L
Sbjct: 121 EVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSIPGEVTEHEPDLAL 168


>gi|71665723|ref|XP_819828.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885147|gb|EAN97977.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 420

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 32/206 (15%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +        PRPETE+     +   L
Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCFPPLLCPRPETEMWTHWFVQRHL 199

Query: 91  PRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            R   +++  +R+LD+  GTG V +A+    P  + V VD+  +A+++++ NA  NG+  
Sbjct: 200 SRATADEKSPLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259

Query: 148 ERFDTLQSDWFSS-VE---------------------------GLFDVIVSNPPYIESVI 179
            R+  ++SD F + VE                           G FD+IVSNPPY+    
Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSSGKNKEGISENKKTQIADLHVGSFDIIVSNPPYVLPEQ 319

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSH 205
              L   ++ ++ +I+L G     +H
Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENH 345


>gi|282853791|ref|ZP_06263128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J139]
 gi|282583244|gb|EFB88624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J139]
 gi|314981452|gb|EFT25546.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA3]
 gi|315092116|gb|EFT64092.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA4]
          Length = 291

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FD++V+NPPY+       +
Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISL 196
             EV + +P ++L
Sbjct: 202 PGEVTEHEPDLAL 214


>gi|282880495|ref|ZP_06289202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305598|gb|EFA97651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella timonensis CRIS 5C-B1]
          Length = 283

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 25/257 (9%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G+S   +I    S L   +   L   I+R  + E +  ILG ++F      +S     PR
Sbjct: 33  GMSLTDIICGKVSELSTDECQSLQEIILRLQRFEPVQYILGVKEFAGRTFHVSPGVLIPR 92

Query: 76  PET----ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            ET    + +VD+       +  K     ILD+GTG+G + + L  E    K V  D+S 
Sbjct: 93  DETAELCQWIVDTI------QESKLKSPTILDIGTGSGCIAITLSLEIQKAKVVAWDVST 146

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
            A+++A  NA   G +      Q+   +  + + +D+IVSNPPYI     + +   V  +
Sbjct: 147 TAIQVANQNARDLGATVSI-VCQNALNAPRDAMKWDIIVSNPPYICPTEAEEMEPNVLSY 205

Query: 191 DPRISLDGG-------IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +P+ +L           D ++HY T A      L   G    EI    +  VV + +++ 
Sbjct: 206 EPKEALFVPENHPLLFYDAIAHYATTA------LKPHGKLYFEINPLYRKSVVEMLKNKG 259

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   KD  G +R++
Sbjct: 260 FIGVMIRKDAFGKERMV 276


>gi|323339962|ref|ZP_08080229.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
 gi|323092604|gb|EFZ35209.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
          Length = 120

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 1/107 (0%)

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD F++++G FD+IVSNPPYI       +   V + +P ++L    +GL+ Y+ I   + 
Sbjct: 10  SDVFAAIDGKFDIIVSNPPYIAESEKKYMDKSVLEHEPTLALFAENNGLAIYQKICRQLK 69

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260
            HL  DG   +EIG+ Q   VV +FE +     V   KD  G+DR++
Sbjct: 70  DHLKNDGSLYLEIGFLQGKAVVEMFEKAYPKAEVTLKKDESGHDRMV 116


>gi|317056867|ref|YP_004105334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 7]
 gi|315449136|gb|ADU22700.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 7]
          Length = 283

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 13/219 (5%)

Query: 28  SVLDDRQRFFLTN----AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           S LDD     L+        R    E +  +LG  +F  + L +      PR +TE LV+
Sbjct: 45  SALDDEADGILSKDFEKLCERRRNGEPLQYLLGEWEFCGIPLKVGKGVLIPRQDTETLVE 104

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                ++ + +  D +  +DL +G+G + LA+ +     K   V+ S  A    + N   
Sbjct: 105 ----LAVNKYKNTDGIVAVDLCSGSGCIALAVERFLKCSKVYAVEKSEAAAVHLRENLKM 160

Query: 144 NGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           NG + +    D L+     S+    D+IV NPPY+    ++ L  EV  ++P  +L GG 
Sbjct: 161 NGSAVQLIMGDVLEYGCAESIPEC-DLIVCNPPYLTGEDMERLQKEVT-YEPVEALFGGE 218

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           DGL  YR +       L   G    EIG  Q+ DV++I 
Sbjct: 219 DGLDFYRAVTRIWKNRLKTGGTLIYEIGMGQEDDVMQIM 257


>gi|315092953|gb|EFT64929.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL060PA1]
          Length = 291

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRCRGGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FD++V+NPPY+       +
Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISL 196
             EV + +P ++L
Sbjct: 202 PGEVTEHEPDLAL 214


>gi|314923483|gb|EFS87314.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL001PA1]
 gi|314966527|gb|EFT10626.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL082PA2]
 gi|327327351|gb|EGE69127.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL103PA1]
          Length = 291

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FD++V+NPPY+       +
Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISL 196
             EV + +P ++L
Sbjct: 202 PGEVTEHEPDLAL 214


>gi|294955906|ref|XP_002788739.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983]
 gi|239904280|gb|EER20535.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983]
          Length = 213

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 11/156 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETEL+V   L   LP        RILDL +G+G + +AL       +    D+S +A+ 
Sbjct: 16  PETELMVQRILEGGLPGGR-----RILDLCSGSGVIGIALATAWATMRVDLADLSEQAMG 70

Query: 136 IAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ NA   GV +R   L        F++    +D++VSNPPYI +  V  L   V++ +
Sbjct: 71  LARENAKRFGVYDRLKFLVGPISDQEFTA--NSYDMVVSNPPYIPTESVGNLSRTVKNHE 128

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             ++LDGG +G++  + + +  S  L  +G+  +E+
Sbjct: 129 DILALDGGEEGMNIVQEVLNVSSMVLKPNGMLWMEL 164


>gi|327399627|ref|YP_004340496.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hippea maritima DSM 10411]
 gi|327182256|gb|AEA34437.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hippea maritima DSM 10411]
          Length = 266

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 126/257 (49%), Gaps = 49/257 (19%)

Query: 22  VIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           V+ +P   L+DRQ      LTN   R L++   + I   ++FY +   +      PRPET
Sbjct: 41  VLTNPQKELNDRQIEEIERLTNK--RKLRYPMAY-ITHSKEFYGLEFYVDDRVLIPRPET 97

Query: 79  ELLVDSALAFSLPRIEKRDV--VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKAL 134
           EL+VD  L  +       D+   +I+D+GTG+G  A+ L+ L ++        DIS +AL
Sbjct: 98  ELIVDVTLKIA------SDIKNPKIVDIGTGSGCIAITLSKLLDTHI---TASDISKEAL 148

Query: 135 EIAKSNAVTNGVSERFDT----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +AK NA      +R D     + ++    ++   D+I +NPPY+     + L  +V+ F
Sbjct: 149 NVAKLNA------KRLDADISLINANGLDFLKNGIDIITTNPPYVLENEYELLSEDVK-F 201

Query: 191 DPRISL-----DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +P+I+L     +G I+ L          ++ L K     +EIG +Q    ++I ++ + +
Sbjct: 202 EPKIALIPPSGNGFIEDLIEK-------AKQLTK--WLIMEIGPSQ----LKIIKNSR-Y 247

Query: 246 LVNAFKDYGGNDRVLLF 262
           +    +D+   +RV +F
Sbjct: 248 IYKIIRDFSNKERVAVF 264


>gi|312194250|ref|YP_004014311.1| modification methylase, HemK family [Frankia sp. EuI1c]
 gi|311225586|gb|ADP78441.1| modification methylase, HemK family [Frankia sp. EuI1c]
          Length = 290

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 5/199 (2%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTG 107
           +  +LGW +F+  R+ +    F PR  TE LVD A    L       V R   ++DL  G
Sbjct: 69  LEHVLGWAEFHGQRILVDDGVFVPRRRTEFLVDLAAGRWLADRAAEAVPRAAVVVDLCCG 128

Query: 108 TGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           +GA+   +A L  S   +    DI   A+  A+ N    G       L +     +    
Sbjct: 129 SGALGAVVAGLLRSSGVELHAADIDPAAVRCARRNLAPLGGQLYEGDLYAALPVGLRNRV 188

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+++ N PY+ +  +  +  E R+ +  ++LDGG DGL+  R +  G    L   G   V
Sbjct: 189 DLLLVNAPYVPTAAIGLMPPEAREHESPVALDGGSDGLAVLRRVLAGAGDWLAVGGRLLV 248

Query: 226 EIGYNQKVDVVRIFESRKL 244
           E    Q  +++    +  L
Sbjct: 249 ETSEAQATELIAAVSAAGL 267


>gi|261403419|ref|YP_003247643.1| methylase [Methanocaldococcus vulcanius M7]
 gi|261370412|gb|ACX73161.1| methylase [Methanocaldococcus vulcanius M7]
          Length = 198

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 15/167 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  +++ L S+ +EP  +T LL+ + +      +E ++V   L++G GTG + +A  K 
Sbjct: 4   EFEGIKIKLHSEVYEPAEDTFLLLKNIV-----DVENKEV---LEIGVGTGIISIACAKR 55

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               K VGVDI+  A+ +A  NA  N V+     ++SD F +V G FDVI+ NPPY+ ++
Sbjct: 56  GAK-KVVGVDINPFAVNLALENAKLNNVN-NVSFIKSDLFENVRGEFDVILFNPPYLPTL 113

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D L     + +   + +GG  G        + V  +L + G+  +
Sbjct: 114 DEDKL-----EGNIDYAFNGGKSGREVLNRFLEEVGDYLKEGGVVQI 155


>gi|315103526|gb|EFT75502.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA2]
          Length = 291

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I       DD  RF     + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCGALRIQPSQLIRVTSVNADDEDRF--NQMVDRRRGGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +GV    + L  D     +    FD++V+NPPY+       +
Sbjct: 146 AVEVDDAALMWTRRNLGDSGV----EVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSV 201

Query: 184 GLEVRDFDPRISL 196
             EV + +P ++L
Sbjct: 202 PGEVTEHEPDLAL 214


>gi|254490180|ref|ZP_05103371.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010]
 gi|224464666|gb|EEF80924.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010]
          Length = 308

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 3/134 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DV  ILDL TG+G + +AL           VDIS  AL +A  N   + ++++  ++QSD
Sbjct: 133 DVSAILDLCTGSGCIAIALAMAFENAHVDAVDISHDALAVADININKHQLNDQVRSIQSD 192

Query: 157 WFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            + S+E    +D+I+SNPPY+ +  +  L  E R  +P  +L+   +GL+    I    +
Sbjct: 193 CWQSLEPANQYDLIISNPPYVGADEMAGLPEEYR-HEPVSALEAEDNGLALVEQILLNAA 251

Query: 215 RHLNKDGLCSVEIG 228
            +L  DGL  VE+G
Sbjct: 252 DYLTDDGLLFVEVG 265


>gi|212225058|ref|YP_002308294.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1]
 gi|212010015|gb|ACJ17397.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1]
          Length = 194

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 11/116 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  ++L L    +EP  +T LL ++        ++  DV   LD+GTGTG + L + +++
Sbjct: 5   YKGLKLKLHPQVYEPAEDTFLLAENL------AVKHGDVA--LDMGTGTGIIALLMARKA 56

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +   +GVD++  A+++A+ NA  NG+ E  + +QS+ F  V G FDVI  N PY+
Sbjct: 57  EYV--LGVDVNPLAIKLARENARLNGI-ENVEFIQSNLFEGVNGEFDVITFNAPYL 109


>gi|327394635|dbj|BAK12057.1| methylase HemK family protein YfcB [Pantoea ananatis AJ13355]
          Length = 292

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      +++D F 
Sbjct: 117 HILDMCTGSGCIAIACAYAFPDAEVDAVDISHDALAVAEQNIEEHGLIHHVTPIRADLFR 176

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +D L  E +  +P + L  G DGL   R I      +L+
Sbjct: 177 ELPPVQYDLIVTNPPYVDAEDMDDLPSEYQ-HEPELGLAAGSDGLKLVRRILACAPGYLS 235

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G +    +V + E          +   G D V +  R
Sbjct: 236 EQGVLICEVGNS----MVHMMEQYPDVPFTWLEFDNGGDGVFMLTR 277


>gi|291618242|ref|YP_003520984.1| YfcB [Pantoea ananatis LMG 20103]
 gi|291153272|gb|ADD77856.1| YfcB [Pantoea ananatis LMG 20103]
          Length = 340

 Score = 66.6 bits (161), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      +++D F 
Sbjct: 165 HILDMCTGSGCIAIACAYAFPDAEVDAVDISHDALAVAEQNIEEHGLIHHVTPIRADLFR 224

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +D L  E +  +P + L  G DGL   R I      +L+
Sbjct: 225 ELPPVQYDLIVTNPPYVDAEDMDDLPSEYQ-HEPELGLAAGSDGLKLVRRILACAPGYLS 283

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + G+   E+G +    +V + E          +   G D V +  R
Sbjct: 284 EQGVLICEVGNS----MVHMMEQYPDVPFTWLEFDNGGDGVFMLTR 325


>gi|169838353|ref|ZP_02871541.1| modification methylase, HemK family protein [candidate division TM7
           single-cell isolate TM7a]
          Length = 278

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 19/185 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLG 105
           H  I  IL +++FY  +  ++  T  PRPE+E ++++       +I  +D V    +D+G
Sbjct: 72  HVPIAYILKYKEFYGRKFKVTPATLIPRPESEDIINAI------KILNKDTVSKSAIDIG 125

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA----VTNGVSERFDTLQSDWFSSV 161
           TG+G + +    E P  K    DIS +AL IA  NA        +++ F  L     S  
Sbjct: 126 TGSGILGITTSLECPNIKVDLSDISPEALNIASINASNLKAKVNINKPFSLL-----SET 180

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD I++N PY++    D    ++R  +P ++L     GL     +      HLN+DG
Sbjct: 181 NKKFDYIIANLPYVDKSWQDT-SPDLR-HEPALALYADKSGLELIFKLIKQSPSHLNRDG 238

Query: 222 LCSVE 226
           L  +E
Sbjct: 239 LIFLE 243


>gi|15645009|ref|NP_207179.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695]
 gi|2313486|gb|AAD07450.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695]
          Length = 276

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 29/236 (12%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L +  I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEVRFF--ELVEKRLNNCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+G V ++L  E+P       DIS  ALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIYASDISPNALEVASKNIEHFCLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDG 202
              Q+  +  +  + +++VSNPPYI            R++        +P  +L GG+ G
Sbjct: 165 FLKQTRLWDHMP-MIEMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVKG 212

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
               + I    ++   K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 213 DEILKEIVFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|332637119|ref|ZP_08415982.1| 16S RNA G1207 methylase RsmC [Weissella cibaria KACC 11862]
          Length = 205

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 47/74 (63%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLG G G V +AL    P  + V  +I+ +A E+ K NA  NGVS+R D + SD +S
Sbjct: 61  KILDLGAGYGPVSIALATVMPDREFVAAEINERAAELVKRNAQKNGVSDRIDVVLSDRYS 120

Query: 160 SVEGLFDVIVSNPP 173
            V+G F  I++NPP
Sbjct: 121 GVDGKFAAILTNPP 134


>gi|283786408|ref|YP_003366273.1| methylase [Citrobacter rodentium ICC168]
 gi|282949862|emb|CBG89485.1| putative methylase [Citrobacter rodentium ICC168]
          Length = 310

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLS 253

Query: 219 KDGLCSVEIG 228
            +G+   E+G
Sbjct: 254 DNGILICEVG 263


>gi|238759038|ref|ZP_04620208.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC
           35236]
 gi|238702715|gb|EEP95262.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC
           35236]
          Length = 310

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHAMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|32491158|ref|NP_871412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
 gi|25166365|dbj|BAC24555.1| yfcB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 307

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 96  RDVVR-----ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSE 148
           RD+++     ILD+ TG+G  CL+++    + +      DIS  AL +AK N     +  
Sbjct: 129 RDLIKFKPKNILDVCTGSG--CLSIIAAEVYSEAFIDASDISEGALNVAKFNIKKYNLQN 186

Query: 149 RFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           R + + SD FS++      +D+I+ NPPY+   +++ L  E    +P I L GG DGL  
Sbjct: 187 RINLVLSDLFSNIYFKSKKYDLIIINPPYVNKTVMNSLPKEFLH-EPEIGLFGGNDGLVL 245

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            R I +  +  L+ +G+   E+G N  +
Sbjct: 246 IRKILNESANFLSDNGVLVCEVGENMSI 273


>gi|161502470|ref|YP_001569583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160863817|gb|ABX20440.1| hypothetical protein SARI_00514 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 310

 Score = 66.2 bits (160), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 2/129 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  
Sbjct: 136 ILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+ 
Sbjct: 196 LPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSD 254

Query: 220 DGLCSVEIG 228
            G+   E+G
Sbjct: 255 AGVLICEVG 263


>gi|71066011|ref|YP_264738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter arcticus 273-4]
 gi|71038996|gb|AAZ19304.1| putative modification methylase HemK family protein [Psychrobacter
           arcticus 273-4]
          Length = 391

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 7/133 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDL TG+G  C+A+   + F   +   VDI   ALE+A  N   + +  + + ++SD 
Sbjct: 209 RILDLCTGSG--CIAIGLATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDL 266

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F+ +  E  +++IV+NPPY+++ I+  L  E   ++P  +L  G DGL     I      
Sbjct: 267 FAKIPAEHQYELIVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPD 325

Query: 216 HLNKDGLCSVEIG 228
           +L+ +GL   E+G
Sbjct: 326 YLSPEGLLVCEVG 338


>gi|238785988|ref|ZP_04629950.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri
           ATCC 43970]
 gi|238713092|gb|EEQ05142.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri
           ATCC 43970]
          Length = 314

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  +   ++SD F 
Sbjct: 139 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEHQVTPIRSDLFR 198

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 199 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 257

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 258 DDGVLICEVG 267


>gi|238797449|ref|ZP_04640948.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii
           ATCC 43969]
 gi|238718720|gb|EEQ10537.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii
           ATCC 43969]
          Length = 312

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  +   ++SD F 
Sbjct: 137 HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEHQVTPIRSDLFR 196

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 197 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLDLARRILACAPDFLQ 255

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 256 DDGVLICEVG 265


>gi|293189724|ref|ZP_06608440.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus
           F0309]
 gi|292821314|gb|EFF80257.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus
           F0309]
          Length = 303

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 9/237 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L++ Q   L +A+        +  I G   F  + L      F  RPETE+L   A+  +
Sbjct: 54  LNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTLAARPGVFVVRPETEVLAGLAIDEA 113

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147
           +  + +    R++DL  G+GA+ LA+  E+   +   V+   +   +A  N    GV   
Sbjct: 114 MAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVWAVEKEAEPFALACQNRDAVGVPCL 173

Query: 148 --ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGG-IDGL 203
             ER D       + ++G+ DV+V+NPPY+ +   D +  +     DP ++L GG  DG 
Sbjct: 174 HLERGDATDPATLAHLDGMVDVVVTNPPYVPA---DEMPTQPEASADPHVALYGGSPDGT 230

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                +A      L   G+  +E   +Q+  +V I     +  +    D  G  R L
Sbjct: 231 EIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAAQLGMTDIATLPDLAGRRRFL 287


>gi|290475975|ref|YP_003468870.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus bovienii SS-2004]
 gi|289175303|emb|CBJ82106.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus bovienii SS-2004]
          Length = 312

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 6/156 (3%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     LV++  A  LP+    +   ILDL TG+G + +A   E P  +   VDIS  A
Sbjct: 115 PRSPIGELVNNQFAGLLPQ----EPSTILDLCTGSGCIAIACAHEFPEAEVDAVDISGDA 170

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   +G+  R   + SD F  +  + +D+IV+NPPY++   ++ L  E    +P
Sbjct: 171 LAVTEQNIENHGLLNRVIPILSDLFRDMPPMKYDLIVTNPPYVDEEDMNDLPDEFLR-EP 229

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            + L  G+DGL     I       L ++G+   E+G
Sbjct: 230 ELGLAAGVDGLILACRILANAPDFLTEEGVLICEVG 265


>gi|238026889|ref|YP_002911120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia glumae BGR1]
 gi|237876083|gb|ACR28416.1| Methylase of polypeptide chain release factors [Burkholderia glumae
           BGR1]
          Length = 308

 Score = 65.9 bits (159), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 14/156 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           +   V  +L+L TG+G  CLA+L    F       VD+S  AL +A+ N     +  R  
Sbjct: 128 DPEQVGAVLELCTGSG--CLAVLAAEAFPNAEIDAVDLSEDALAVAEINVADYRLDHRIA 185

Query: 152 TLQSDWFSSV--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
               D ++ +        E  +DVI+SNPPY+ +  +  L  E R  +P ++L GG DG+
Sbjct: 186 LHHGDLYAPLPAERLADPELRYDVILSNPPYVNAASMAALPDEYR-HEPEMALAGGDDGM 244

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              R I     + L +DG+  VEIG N++  V   F
Sbjct: 245 DVVRRILREAKKWLKEDGVLVVEIG-NERPHVEAAF 279


>gi|317506167|ref|ZP_07963988.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255512|gb|EFV14761.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 297

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 101/255 (39%), Gaps = 15/255 (5%)

Query: 17  LSSHQVIVDPDSV-----LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           L++H + V P  V     L + QR      +V+  +   +  +LG   F +V + +    
Sbjct: 38  LAAHVLGVKPGFVWQVDSLSEEQREQFDWLVVQRSRRVPLQYLLGKVFFASVEVLVGPGV 97

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PRPETE L   AL     R+ +     + DL +G+G++ L++    P      V+   
Sbjct: 98  FIPRPETEQLHVWALTALRARLWEIPEPVVFDLCSGSGSLGLSIAHSVPESAVTLVENDP 157

Query: 132 KALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           KAL     N      S R        D           G  D++V+NPPY+ S       
Sbjct: 158 KALVWTHKNVQAGASSGRAPVRVVEGDVTDQALLPDGAGTVDLVVANPPYVPSGTPTP-- 215

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV DFDP  ++  G DGL     +   ++R L   G   VE        V  +F   + 
Sbjct: 216 PEVADFDPPQAVFAGPDGLDVIVGLVGNIARWLKPGGAFGVEHDEGHADQVRALFAKEER 275

Query: 245 FL-VNAFKDYGGNDR 258
           F  V    D  G  R
Sbjct: 276 FREVKTMSDLAGRPR 290


>gi|37527075|ref|NP_930419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786508|emb|CAE15564.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 314

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 10/192 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR     L+++  A  +P         ILDL TG+G + +A     P  +   VDIS   
Sbjct: 117 PRSPIGELINNEFAGLIPE----QPANILDLCTGSGCIAIACAYAFPEAEIDAVDISADV 172

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L + + N   + +  R   ++SD F  +  + +D+IV+NPPY+++  +  L  E R  +P
Sbjct: 173 LAVTEQNIQNHSLDHRVIPIRSDLFRDMPPVKYDLIVTNPPYVDAEDMSDLPEEFRR-EP 231

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            + L  G DGL   R I       L + G+   E+G N  V ++  +       +    +
Sbjct: 232 ELGLAAGSDGLKLARRILATAPNFLTERGVLICEVG-NSMVHLIEQYPDVPFTWLEF--E 288

Query: 253 YGGNDRVLLFCR 264
           YGG D V +  R
Sbjct: 289 YGG-DGVFMLTR 299


>gi|332981031|ref|YP_004462472.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
           BON]
 gi|332698709|gb|AEE95650.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
           BON]
          Length = 201

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  +  L  +  R   R+LD+G G GA+ +++ K     + V VDI+ +A+E+A+ N 
Sbjct: 42  IDTGSSVLLNALPDRLSGRVLDMGCGYGAIGISIAKAYQDVEVVMVDINSRAVELAQGNI 101

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             N ++      QSD F+ VEGLFD+IVSNPP
Sbjct: 102 KLNSINNA-TVYQSDGFAQVEGLFDIIVSNPP 132


>gi|317009682|gb|ADU80262.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori India7]
          Length = 276

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEVRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       D+S KALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKLSIFASDVSLKALEVASKNIERFCLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG-- 202
              Q+  +  +  +  +++SNPPYI      E  ++          +P  +L GG+ G  
Sbjct: 165 FLKQTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214

Query: 203 -LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            L     +A G+     K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 215 ILKEIILLAAGL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|289706368|ref|ZP_06502726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micrococcus luteus SK58]
 gi|289556863|gb|EFD50196.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micrococcus luteus SK58]
          Length = 300

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  + G   F+ + L +    F PRPETELLV++ +A  L      DVV  
Sbjct: 66  VGRRAAREPVQHLTGVAHFHGLDLAVGPGVFIPRPETELLVETVVA-DLAARPTADVV-- 122

Query: 102 LDLGTGTGAVCLAL-----LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +DL TG+GA+  A+      +  P      V++   A + A+ N    GV    D  Q D
Sbjct: 123 VDLCTGSGAIAAAVAAWGEARGRPLAV-AAVELDPTAADWARRNLALRGV----DLRQGD 177

Query: 157 WFSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADG 212
              +   +EG  DV+VSNPPY+    V     E R  DP  +L GG   GL   R IA  
Sbjct: 178 ALVACPDLEGRVDVVVSNPPYVPEAEVPAQ-PEAR-LDPARALYGGDAPGLRVPRAIAHR 235

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            +  L   GL ++E    Q   ++    +   F  V   +D  G DR L   R
Sbjct: 236 AADLLAPGGLFAMEHHETQGPALLAALGADPRFTGVRVHQDLTGRDRFLTARR 288


>gi|169628534|ref|YP_001702183.1| modification methylase HemK [Mycobacterium abscessus ATCC 19977]
 gi|169240501|emb|CAM61529.1| Probable modification methylase HemK [Mycobacterium abscessus]
          Length = 280

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 9/177 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G   F  + + +    F PRPETE L   A     P         +++L  G+ A
Sbjct: 68  LQHLVGSAAFGPIEVRVGPGVFIPRPETESLYAWAAGQLAPH------ATVVELCAGSAA 121

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           + +AL +  P  +   +++   AL   + NA   GV   + D    D  + + G  D+IV
Sbjct: 122 LAIALAQHEPTARVTAIEVDVDALIYTRRNAEGTGVEVVQADVTSPDLLTELNGAVDLIV 181

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +NPPYI       L  EV   DP  +L  G DGL+    I     R L   G   +E
Sbjct: 182 ANPPYIPQDTE--LEPEVARHDPPQALFAGADGLAIIAPIVIAAGRLLAPGGAIGIE 236


>gi|296138964|ref|YP_003646207.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
 gi|296027098|gb|ADG77868.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
          Length = 280

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 99/234 (42%), Gaps = 31/234 (13%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G+   ++++   + +D  Q       + R    E +  ILG   F  + L
Sbjct: 25  DAEVLLAHVLGVDRGRLVI---ADVDAAQAGEYEALVARRADREPLQHILGRAPFGPLDL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPFF 122
            +    F PRPETELL   A          R V R   I+DL  G+GA+ L L    P  
Sbjct: 82  RVGPGVFVPRPETELLAVWA---------ARQVGRGAAIVDLCAGSGALGLYLAATVPAA 132

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---------SSVEGLFDVIVSNPP 173
           +   V+    AL     NA   G++ R   L  D           +++ G  D++V NPP
Sbjct: 133 RVALVERDPHALGYLNDNAA--GLAGRVTVLDRDVTAVGLDAEIEAALGGTVDLVVCNPP 190

Query: 174 YIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           Y+     D   L+V    DP  +L  G DGL   R++A   +R L   G  ++E
Sbjct: 191 YVP----DGAPLDVEAALDPAAALFSGPDGLDLIRSLAPLCTRLLRTGGAVAIE 240


>gi|254000255|ref|YP_003052318.1| methyltransferase small [Methylovorus sp. SIP3-4]
 gi|253986934|gb|ACT51791.1| methyltransferase small [Methylovorus sp. SIP3-4]
          Length = 331

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 67/133 (50%), Gaps = 15/133 (11%)

Query: 55  LGWRD-----FYNVRLTLSS--DTFEPR-----PETELLVDSALAFSLPRIEKRDVVRIL 102
           +GWR        N RL L S   T E       P+T   V +   ++  R  +  V R +
Sbjct: 98  MGWRSKVRVASLNGRLFLHSAYPTLEASSVFFGPDTYRFVRAVQQYAETR--QPTVRRAV 155

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G   +AL    P  +  GVDI+  AL +A+ NA  NG  ER   L SD    V 
Sbjct: 156 DIGTGSGVGAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMLHSDLLRDVA 214

Query: 163 GLFDVIVSNPPYI 175
           G FD+I++NPPY+
Sbjct: 215 GEFDLIIANPPYL 227


>gi|332088462|gb|EGI93580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella boydii 5216-82]
          Length = 310

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +      P  +   VDIS  AL +A+ N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIVCAYVFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L 
Sbjct: 195 DLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLA 253

Query: 219 KDGLCSVEIG 228
            DG+   E+G
Sbjct: 254 DDGVLICEVG 263


>gi|296136206|ref|YP_003643448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thiomonas intermedia K12]
 gi|295796328|gb|ADG31118.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thiomonas intermedia K12]
          Length = 316

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ TG+G  CLA+L    +       VD+S  AL +A+ N     +  R   + SD 
Sbjct: 140 RVLDMCTGSG--CLAILAALVWNDAQVDAVDLSADALAVAEINREAYALQHRLRLIASDL 197

Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++S+       +D+++ NPPY+ +  +  L  E R  +P ++L GG DG+   R      
Sbjct: 198 WASLAAAPSQAYDLVLCNPPYVPAASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDA 256

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             HL+  G+  +E+G N++      F +
Sbjct: 257 PAHLSARGIVVLEVG-NERAAFEAAFPT 283


>gi|238791933|ref|ZP_04635569.1| Uncharacterized adenine-specific methylase [Yersinia intermedia
           ATCC 29909]
 gi|238728564|gb|EEQ20082.1| Uncharacterized adenine-specific methylase [Yersinia intermedia
           ATCC 29909]
          Length = 314

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  +   ++SD F 
Sbjct: 139 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHEMEHQVTPIRSDLFR 198

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I       L 
Sbjct: 199 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRILACAPDFLQ 257

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            DG+   E+G N  V ++ ++
Sbjct: 258 DDGVLICEVG-NSMVHLMDLY 277


>gi|228469583|ref|ZP_04054576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas uenonis 60-3]
 gi|228308933|gb|EEK17608.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas uenonis 60-3]
          Length = 302

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 110/264 (41%), Gaps = 17/264 (6%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  I+G   F +  L
Sbjct: 37  SEMLLQHITKLSQTNYLLDRKVRQLSDTEATWLCQALERLTHDEPIQYIVGVAPFGSFDL 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  LA   P  E     R+LD+G G+  + + +  E P +   
Sbjct: 97  TVGRGVLIPRPETAELCELILARH-PATEAPQ--RLLDVGCGSACIPIYIGSERPQWSLY 153

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177
            +D S +AL  A+ N    GV+ +    + D F+  +G          +++VSNPPYI  
Sbjct: 154 AMDQSEQALGYAEQNVRQTGVAVQL--FRGDLFAWCQGKGIPAKLPPINLLVSNPPYIPE 211

Query: 178 VIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYNQKVD 234
                +   V   +PR +L     D L +YR +   V +  +     ++  E  +    +
Sbjct: 212 CDQATMRPNVLVGEPREALFVPDADPLRYYRALVALVPQIRSPQAPLTLYCETHHQLAHE 271

Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258
           V  + E          KD  G +R
Sbjct: 272 VAALCEQAGAISSEVLKDLTGRER 295


>gi|237732363|ref|ZP_04562844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
 gi|226907902|gb|EEH93820.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
          Length = 310

 Score = 65.1 bits (157), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L+
Sbjct: 195 DLLKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLS 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            +G+   E+G N  V ++  +
Sbjct: 254 DNGILICEVG-NSMVHLIEQY 273


>gi|227832890|ref|YP_002834597.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262182621|ref|ZP_06042042.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453906|gb|ACP32659.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 294

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 27/232 (11%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------ 97
           R    E +  ILG   F  + L      F PRPETE+L D  + F L ++   +      
Sbjct: 64  RREAREPLQHILGVAWFGALELEAGPGVFIPRPETEVLADWGVKF-LTKLNSGETTRFNS 122

Query: 98  -VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTL 153
            V R++DL  G+GA+ L +    P  +   V+++  AL   + N   +    +    D  
Sbjct: 123 QVPRVVDLCAGSGALALYVAHYVPQAEVWAVELADAALAYIRRNVARHAPDLQLVQGDVT 182

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGLSHYR 207
            S+   ++ G  D++++NPPY+          E  D DP +  D      GG+DG+    
Sbjct: 183 DSEILPALHGTVDLVLTNPPYVP---------ETPDLDPEVYQDPHEAVFGGVDGMETIT 233

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
            +   ++  L   G   +E        V     +   F  +   KD  G  R
Sbjct: 234 AMIPTIAALLRPGGRVGIEHDDETSQQVQEALRAHGGFSDIEVLKDLTGTAR 285


>gi|317012846|gb|ADU83454.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori Lithuania75]
          Length = 276

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 39/249 (15%)

Query: 32  DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75
            ++R FL       L HE                 I  +LG  DFY     ++     PR
Sbjct: 34  QKERVFLHAHAYLELNHEEEVHFFELVGKRLNDCPIEYLLGSCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE
Sbjct: 94  PETEILVQKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKLCIHASDISPKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189
           +A  N     + ER    Q+  +  +  + +++VSNPPYI      E  ++         
Sbjct: 150 VALKNIERFNLKERVFLKQTHLWDRMP-IIEMLVSNPPYIARGYPLEKSVLK-------- 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P  +L GG+ G    + I    ++   K      E+GY+Q   +    E    +    
Sbjct: 201 -EPHEALFGGVKGDEILKEIVFLAAK--LKIPFLVCEMGYDQLKSLKECLEFCG-YDAEF 256

Query: 250 FKDYGGNDR 258
           +KD  G DR
Sbjct: 257 YKDLSGFDR 265


>gi|148253253|ref|YP_001237838.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium sp. BTAi1]
 gi|146405426|gb|ABQ33932.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Bradyrhizobium sp. BTAi1]
          Length = 322

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 6/134 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG+G  CLA+L    F   +   VDIS  AL +A  N     + ER    + D F
Sbjct: 159 VLDLCTGSG--CLAILASRHFPNAMIDAVDISKDALAVAAKNVADYDLGERISLHRGDLF 216

Query: 159 SSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + + +  +D+I+SNPPY+++  +  L  E    +P ++ DGG DGL     I      HL
Sbjct: 217 APLSQRRYDLIISNPPYVDAEGMAGLPQEC-GAEPALAFDGGADGLDIIHRILGQARDHL 275

Query: 218 NKDGLCSVEIGYNQ 231
             +G    E+G ++
Sbjct: 276 TAEGGLLCEVGRDR 289


>gi|116671164|ref|YP_832097.1| HemK family modification methylase [Arthrobacter sp. FB24]
 gi|116611273|gb|ABK03997.1| modification methylase, HemK family [Arthrobacter sp. FB24]
          Length = 298

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 6/214 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTG 107
            +  I G   F  ++L +    F PRPETE +V   + +     R++ R   +++DLGTG
Sbjct: 73  PLQHITGVAHFRYLQLAVGPGVFIPRPETESVVQLVIDWLGDRDRLQGRARPKVVDLGTG 132

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +GA+  ++  E P  +   V+ S  A   A+ N    GV+     L+ D      G FDV
Sbjct: 133 SGAIAGSIALEVPGAEVYAVEFSEFAHAWAERNLRPLGVTLLRGDLR-DALPEHNGTFDV 191

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +VSNPPYI +  +     EV   DP  +L  GG DG+      A   +R L   G   +E
Sbjct: 192 VVSNPPYIPAEAIPNE-PEVALHDPPEALYGGGADGMELPTAAAASAARLLVPGGYFVME 250

Query: 227 IGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRV 259
               Q   +  + +   L+  V    D  G +R 
Sbjct: 251 HAEVQATWIAAMMKKSGLWSDVTTHLDLNGRERA 284


>gi|78369416|ref|NP_001030385.1| hemK methyltransferase family member 1 [Bos taurus]
 gi|74354715|gb|AAI02829.1| HemK methyltransferase family member 1 [Bos taurus]
          Length = 321

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 13/223 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDV-VRIL 102
           L+   +  ILG  DF  + L ++   F PRPETE LV+  L      PR+   +    IL
Sbjct: 98  LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLIL 157

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FD-TLQSD 156
           ++G G+GA+ L+LL   P  +   VD    A+ +   NA    + +R     FD TL   
Sbjct: 158 EVGCGSGAISLSLLSRLPQSRVTAVDKGEAAICLTHENAQRLRLQDRIQIVPFDVTLVES 217

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W   +  G  D++VSNPPY+    ++ L  E+  ++  ++LDGG +G+     I     +
Sbjct: 218 WAHLLPWGPVDLVVSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQ 277

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGG 255
            L   G   +E+       V    +S+    L LV   +D+ G
Sbjct: 278 LLKDSGSIFLEVDPRHPELVGSWLQSQPDLPLNLVAVRRDFRG 320


>gi|156933075|ref|YP_001436991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter sakazakii ATCC BAA-894]
 gi|156531329|gb|ABU76155.1| hypothetical protein ESA_00885 [Cronobacter sakazakii ATCC BAA-894]
          Length = 338

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 163 HILDMCTGSGCIAIACAYAFPNAEVDAVDISADALAVTEHNIEEHGLIHHVTPIRSDLFR 222

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 223 DLPKVQYDIIVTNPPYVDEEDMSDLPNEYR-HEPELGLAAGSDGLKLARRILACSPDYLT 281

Query: 219 KDGLCSVEIG 228
            +G+   E+G
Sbjct: 282 DNGILICEVG 291


>gi|288800422|ref|ZP_06405880.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332635|gb|EFC71115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 281

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 96/218 (44%), Gaps = 11/218 (5%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS   ++ + D+ L   Q+  L     + L  E +  +L    F      + S    PR
Sbjct: 33  NLSFTDILCNKDTQLSKEQQHKLQKITEQLLLGEPVQYVLQQAWFAGSWFKVHSGVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKA 133
           PETE L         P +      +ILD+GTG+G  A+ L+LL ++   +    DI+ +A
Sbjct: 93  PETEDLC--YWIAEQPTLSSLSNPKILDIGTGSGCIAITLSLLIKNA--QTTAWDIAPEA 148

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           L +AK NA    VS   + ++ D  ++      +D+IVSNPPYI       +   V  F+
Sbjct: 149 LSLAKENAKAMNVS--IEVVEQDALNAPCDNEKWDIIVSNPPYITPQEQSEMEANVLQFE 206

Query: 192 PRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSVEIG 228
           P  +L    D  L  Y+ I     + L + G    EI 
Sbjct: 207 PNCALFVPEDNPLIFYKAITHYAQKALVQGGTLFFEIN 244


>gi|332673874|gb|AEE70691.1| protoporphyrinogen oxidase [Helicobacter pylori 83]
          Length = 276

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 39/248 (15%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76
           ++R FL       L HE   R   W                 DFY     ++     PRP
Sbjct: 35  KERVFLHTHAYLELNHEEEARFFEWVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE+
Sbjct: 95  ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190
           A  N     + ER    ++  +  +  +  ++VSNPPYI      E  ++          
Sbjct: 151 ASKNIERFCLKERIFLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK--------- 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +    +
Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257

Query: 251 KDYGGNDR 258
           KD+ G DR
Sbjct: 258 KDWSGFDR 265


>gi|291393746|ref|XP_002713409.1| PREDICTED: HemK methyltransferase family member 1-like [Oryctolagus
           cuniculus]
          Length = 350

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 13/228 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRIL 102
           L+   +  ILG  DF  + L ++   F PRPETE LV+  L     R      +    IL
Sbjct: 116 LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPCAAGAQGGPLIL 175

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSD 156
           ++G G+GA+ L+LL +    + + VD    A+ +   NA    + +R        TL+  
Sbjct: 176 EVGCGSGAIALSLLSQLLESRVIAVDREEAAICLTHENAQRLQLQDRIWIVPLDVTLEGS 235

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W   +  G  D++VSNPPY+    ++ L  E+  ++   +LDGG +G+     I     R
Sbjct: 236 WTHLLPWGPVDLVVSNPPYVFHQDMEQLAPEILSYEDAAALDGGKEGMDLITHILSLAPR 295

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
            L   G   +E+       V    +SR    L LV   +D+ G  R L
Sbjct: 296 LLKDSGSIFLEVDPRHPELVSSWLQSRPGLSLSLVAVRRDFCGRPRFL 343


>gi|134102727|ref|YP_001108388.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007816|ref|ZP_06565789.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915350|emb|CAM05463.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
          Length = 291

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 22/245 (8%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +VDP  V +      L   + R  K   +  + G      V L +    F PRPETELL+
Sbjct: 49  LVDPPVVRE------LEELVRRRAKRVPLQHLTGTAHLGGVTLNVGPGVFVPRPETELLL 102

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA- 141
              LA      E  +   ++DL +G+GA+ LA+    P      V++   AL   + NA 
Sbjct: 103 AWGLALL----EGVESPTVVDLCSGSGALALAVAHARPDAAVYAVEVGPAALSWVRRNAD 158

Query: 142 --VTNGVSE----RFDTLQSDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRI 194
             V  G +       D         ++G  D+++ NPPY+ E   V     EVRD DP  
Sbjct: 159 QQVAAGDTPIRLYAGDVTDPTLLMDLDGTVDLVLCNPPYVPEGTPVPP---EVRDHDPHE 215

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDY 253
           ++ GG DGL   R +    +R L   G  ++E        V  +  +R++   V    D 
Sbjct: 216 AVFGGRDGLDVVRHVVGCAARLLRPGGGVAIEHDDTHGGSVPALLSARRVLTDVEDHTDL 275

Query: 254 GGNDR 258
            G  R
Sbjct: 276 AGRPR 280


>gi|297243817|ref|ZP_06927747.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis AMD]
 gi|296888238|gb|EFH26980.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis AMD]
          Length = 332

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 32/224 (14%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA------IVRSLKHESIHRILGWRD 59
           D+   L +  G+S  ++  +   +L D   F L  A      + R    E +  I+G   
Sbjct: 26  DARLLLAKACGISLAEL--NKALILGDLTDFSLDYASEYSDFVSRRASREPLQHIVGRAP 83

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  + L +    F PRPETE++VD+ L +     I K  VV   DL  G+GA+ L++  E
Sbjct: 84  FRYLDLRIGKGVFVPRPETEVVVDAGLDWLRESHISKPTVV---DLCAGSGAIGLSIATE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQSDW-----------FSS 160
               +   V+ S +A +  + N            +S R+  + +D              +
Sbjct: 141 VADAQVWAVEKSPEAFQYLRKNFEETAKNYENMQISSRYHAVLADATKAHISDLTPELHA 200

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGL 203
           + G  D++++NPPY+    V    +EVR++DP ++L GG +DGL
Sbjct: 201 ICGKVDLVITNPPYVPENQVP-EQIEVREYDPPLALYGGSVDGL 243


>gi|154509272|ref|ZP_02044914.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798906|gb|EDN81326.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC
           17982]
          Length = 303

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 9/237 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L++ Q   L +A+        +  I G   F  + L      F  RPETE+L   A+  +
Sbjct: 54  LNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTLAARPGVFVVRPETEVLAGLAIDEA 113

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147
           +  + +    R++DL  G+GA+ LA+  E+   +   V+   +   +A  N    GV   
Sbjct: 114 MAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVWAVEKEAEPFALACQNRDAVGVPCL 173

Query: 148 --ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGG-IDGL 203
             ER D       + ++G+ DV+V+NPPY+ +   D +  +     DP ++L GG  DG 
Sbjct: 174 HLERGDATDPATLAHLDGMVDVVVTNPPYVPA---DEMPTQPEASADPHVALYGGSPDGT 230

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                +A      L   G+  +E   +Q+  +V I     +  +    D  G  R L
Sbjct: 231 EIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAAQLGMTDIATLPDLTGRRRFL 287


>gi|260598751|ref|YP_003211322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter turicensis z3032]
 gi|260217928|emb|CBA32526.1| Uncharacterized adenine-specific methylase yfcB [Cronobacter
           turicensis z3032]
          Length = 310

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPNAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 DLPKVQYDIIVTNPPYVDEEDMSDLPNEYR-HEPELGLAAGSDGLKLARRILACSPDYLT 253

Query: 219 KDGLCSVEIG 228
            +G+   E+G
Sbjct: 254 DNGILICEVG 263


>gi|208434969|ref|YP_002266635.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter
           pylori G27]
 gi|208432898|gb|ACI27769.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter
           pylori G27]
          Length = 274

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 7/145 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKLSIHASDISLKALEVASKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175
              Q+  +  +  + +++VSNPPYI
Sbjct: 165 FLKQTHLWDRMPTI-EMLVSNPPYI 188


>gi|302545563|ref|ZP_07297905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302463181|gb|EFL26274.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces himastatinicus ATCC 53653]
          Length = 270

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 7/172 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LGW +F  +R+++ +  F PR  TE LV+ A A +           ++DL  G+GA
Sbjct: 58  LEHVLGWAEFRGLRISVDAGVFVPRRRTEFLVERAAAVAR------AGAVVVDLCCGSGA 111

Query: 111 VCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           +  AL+ E     +    DI   A+  A+ N    G +     L     +++ G  DV++
Sbjct: 112 LGAALVAELGGRAEWYAADIDPAAVRCARRNVEPAGGAVFEGDLYEPLPAALRGRVDVLL 171

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +N PY+ +  V  L  E R  + R++LDGG DGL   R +  G    L   G
Sbjct: 172 ANVPYVPTEEVGLLPPEARVHEARVALDGGADGLDVLRRVTAGAPGWLAPGG 223


>gi|300858257|ref|YP_003783240.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685711|gb|ADK28633.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205978|gb|ADL10320.1| Putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Corynebacterium pseudotuberculosis
           C231]
 gi|302330531|gb|ADL20725.1| Putative protoporphyrinogen oxidase HemK [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276213|gb|ADO26112.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis I19]
          Length = 272

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 10/218 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R  + E +  I+G   F  + L +    F PRPETE+L D    +++ ++   + V  
Sbjct: 56  VARRAQREPLQHIIGKAWFGPLILKVGPGVFIPRPETEVLAD----WAVQQLSGGETV-- 109

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DL TG+GA+   +    P  K   V++S  A   A+ N   +      D    +    +
Sbjct: 110 VDLCTGSGALAAYVATLVPTTKVTAVELSPSAAHYAQENLPPSVNLIIGDATDPNVLRPL 169

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  DV+VSNPPY+       L  EV  +DP +++  G DG+   + +   +   L   G
Sbjct: 170 MGTVDVLVSNPPYVPE--TPDLTPEVY-YDPAMAVFSGKDGMDMIKLLIPVIHELLAPHG 226

Query: 222 LCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
              +E      + V++ F +   F  +   KD  G +R
Sbjct: 227 RVGIEHDDATSLAVLQEFRAHGGFEEITVVKDLTGRNR 264


>gi|253988907|ref|YP_003040263.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780357|emb|CAQ83518.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 310

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL TG+G + +A     P  +   VDIS   L + + N   + +  R   ++SD F  
Sbjct: 136 ILDLCTGSGCIAIACAYAFPEAEVDAVDISADVLVVTEQNIQNHNLEHRVIPIRSDLFRD 195

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I       L +
Sbjct: 196 MPPVKYDLIVTNPPYVDAEDMSDLPEEFR-CEPELGLAAGSDGLKLARRILATAPDFLTE 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G+   E+G N  V ++  +       +    +YGG D V +  R
Sbjct: 255 QGILICEVG-NSMVHLIEQYPDVPFTWLEF--EYGG-DGVFMLTR 295


>gi|237713238|ref|ZP_04543719.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406622|ref|ZP_06083171.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646172|ref|ZP_06723828.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a]
 gi|294807858|ref|ZP_06766640.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446705|gb|EEO52496.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355325|gb|EEZ04416.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638501|gb|EFF56863.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a]
 gi|294444920|gb|EFG13605.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 236

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 16/162 (9%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P  K V ++I   A E A+ N   +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAEQARENVARSPWQERIEVVQADFK 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     VD L       D + +     D L+ Y  + +GV+R 
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEELLEGVNRL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255
           L  DGL +V I  +    V  I    KL+ +   N     GG
Sbjct: 150 LAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191


>gi|323144315|ref|ZP_08078930.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Succinatimonas hippei YIT 12066]
 gi|322415906|gb|EFY06625.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Succinatimonas hippei YIT 12066]
          Length = 333

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 11/162 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+LD+ TG+G + +A+   +  F G      VDIS +ALE+A+ N    G+      ++S
Sbjct: 157 RVLDMCTGSGCIAIAI---ALHFDGDCEVDAVDISEEALEVAEINIRGYGLENCVFPIKS 213

Query: 156 DWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           D FS++     +D+IV+NPPY+++  +  +  E  + +P ++L  G DGL   R I    
Sbjct: 214 DLFSALPKGDKYDLIVANPPYVDAYDLSTMPKEF-EAEPELALGSGEDGLDCARKILAQA 272

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             +L+ DG+  +E+G N   ++   F       ++  K  GG
Sbjct: 273 VDYLSDDGVLIMEVG-NSAENLNDAFPHVPFHFIDLKKGGGG 313


>gi|283832238|ref|ZP_06351979.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Citrobacter youngae ATCC 29220]
 gi|291071879|gb|EFE09988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Citrobacter youngae ATCC 29220]
          Length = 310

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 3/141 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+      ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIHHVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  + +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I      +L 
Sbjct: 195 DLLKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTRRILGNAPDYLA 253

Query: 219 KDGLCSVEIGYNQKVDVVRIF 239
            +G+   E+G N  V ++  +
Sbjct: 254 DNGILICEVG-NSMVHLIEQY 273


>gi|229168050|ref|ZP_04295779.1| Modification methylase, HemK [Bacillus cereus AH621]
 gi|228615416|gb|EEK72512.1| Modification methylase, HemK [Bacillus cereus AH621]
          Length = 258

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV    A S      R    I+DL  G+GA
Sbjct: 49  LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------RSSDIIVDLCCGSGA 102

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V  AL       +   VDI   A++ A  N VTN     F+  L      S++G  +++V
Sbjct: 103 VGAALAAALGRVELYSVDIDPIAVQCASRN-VTNFGGHAFEGDLYKALPDSLKGHVNILV 161

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ + I+  L  E R ++P ++LDGG DGL+  R +A+     L  DG   +E   
Sbjct: 162 ANVPYVPTEIIKFLPREARLYEPHVTLDGGEDGLNILRRVAEEALLWLALDGHLLIETSE 221

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF    L
Sbjct: 222 VQAPQAFEIFAGAGL 236


>gi|294340442|emb|CAZ88823.1| putative Site-specific DNA-methyltransferase (adenine-specific)
           [Thiomonas sp. 3As]
          Length = 316

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ TG+G  CLA+L    +       VD+S  AL +A+ N     +  R   + SD 
Sbjct: 140 RVLDMCTGSG--CLAILAALVWDDAQVDAVDLSADALAVAEINREAYALQHRLRLVASDL 197

Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++S+       +D+++ NPPY+ +  +  L  E R  +P ++L GG DG+   R      
Sbjct: 198 WASLAAAPSQAYDLVLCNPPYVPTASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDA 256

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             HL+  G+  +E+G N++      F +
Sbjct: 257 PAHLSARGIVVLEVG-NERAAFEAAFPT 283


>gi|237808925|ref|YP_002893365.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
 gi|237501186|gb|ACQ93779.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
          Length = 311

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 4/147 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + +  RI+DL TG+G + +A+    P  +   +D+S  AL + + N   +G+  +   + 
Sbjct: 130 QHEPTRIMDLCTGSGCIAIAMAHTFPAAEVDALDLSEDALAVCEMNIEMHGMLGQVIPIC 189

Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           SD F ++     +D+IVSNPPY++   +  L  E    +P ++L  G DGL   R I   
Sbjct: 190 SDLFDALPAGDKYDLIVSNPPYVDVEDMSDLPEEFH-HEPEMALAAGDDGLDLVRRILAE 248

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               L ++G+  VE+G N  V +  +F
Sbjct: 249 AGELLKENGVLVVEVG-NSMVHLAALF 274


>gi|28493401|ref|NP_787562.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist]
 gi|28572488|ref|NP_789268.1| peptide chain release factor methyltransferase [Tropheryma whipplei
           TW08/27]
 gi|28410620|emb|CAD67006.1| putative peptide chain release factor methyltransferase [Tropheryma
           whipplei TW08/27]
 gi|28476442|gb|AAO44531.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist]
          Length = 285

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 18/207 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118
           FY   + +      PRPETE+LV   L           ++R + DLGTGTG + LAL   
Sbjct: 79  FYEHDILVGPGALVPRPETEILVQRVLT---ELCTTGTLIRSVWDLGTGTGCITLALASR 135

Query: 119 SPFFKGVGVDISCKALEIAKSNA--VTNGVSERFD-TLQSDWFSSVE--GLFDVIVSNPP 173
           +   + + VD S  A++ A+ N   + N    + D T+ SD  + +   G  DV+V+NPP
Sbjct: 136 ATDIEYLAVDKSNSAIQWAEKNLRHLRNVTIRKADFTVDSDLLALLSEFGPPDVVVANPP 195

Query: 174 YIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           Y+   ++         ++P ++L  GG +GL   R +A   S  L   GL  +E   +Q 
Sbjct: 196 YLPQSVMH------EKYEPYMALCGGGPEGLDLLRAVARASSIVLANSGLLFLEHLPDQS 249

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRV 259
             +    E+     + +F D   NDR+
Sbjct: 250 QSLRVSLEAMGFCDIESFCDL--NDRL 274


>gi|313202221|ref|YP_004040879.1| methyltransferase small [Methylovorus sp. MP688]
 gi|312441537|gb|ADQ85643.1| methyltransferase small [Methylovorus sp. MP688]
          Length = 331

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 15/133 (11%)

Query: 55  LGWRD------------FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           +GWR              ++   TL + +    P+T   + +   ++  R  +  V R +
Sbjct: 98  MGWRSKVRVASLNGQLFLHSAYPTLEASSVFFGPDTYRFIRAVQQYAQTR--QPTVRRAV 155

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G   +AL    P  +  GVDI+  AL +A+ NA  NG  ER   + SD    V 
Sbjct: 156 DIGTGSGVGAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMVHSDLLQDVA 214

Query: 163 GLFDVIVSNPPYI 175
           G FD+I++NPPY+
Sbjct: 215 GEFDLIIANPPYL 227


>gi|326771964|ref|ZP_08231249.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces viscosus C505]
 gi|326638097|gb|EGE38998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces viscosus C505]
          Length = 301

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 10/169 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100
           ++R    E +  I+G        L      F  RPETE++  +A+  +   ++    VV 
Sbjct: 75  VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVL 134

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
             DL TG+GA+   + KE P  + V V+IS  A  +A+ N     V  R + + +D    
Sbjct: 135 TADLCTGSGAIAACVAKEVPGARVVAVEISETAASLAREN-CERLVPGRVEVIHADATDP 193

Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                + G  DV+VSNPPY+ +  V+    E    +P ++L  GG DGL
Sbjct: 194 LVLHDLNGQIDVVVSNPPYVPAGAVE--DTETEQHEPTVALYGGGPDGL 240


>gi|296474810|gb|DAA16925.1| HemK methyltransferase family member 1 [Bos taurus]
          Length = 321

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDV-VRIL 102
           L+   +  ILG  DF  + L ++   F PRPETE LV+  L      PR+   +    IL
Sbjct: 98  LQRMPVQYILGEWDFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLIL 157

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FD-TLQSD 156
           ++G G+GA+ L+LL   P  +   VD    A+ +   NA    +  R     FD TL   
Sbjct: 158 EVGCGSGAISLSLLSRLPQSRVTAVDKGEAAICLTHENAQRLRLQARIQIVTFDVTLVES 217

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W   +  G  D++VSNPPY+    ++ L  E+  ++  ++LDGG +G+     I     +
Sbjct: 218 WAHLLPWGPVDLVVSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQ 277

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGG 255
            L   G   +E+       V    +S+    L LV   +D+ G
Sbjct: 278 LLKDSGSIFLEVDPRHPELVGSWLQSQPDLPLNLVAVRRDFRG 320


>gi|207091970|ref|ZP_03239757.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 242

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 25/234 (10%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV   L    
Sbjct: 19  EEEMRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKTLDI-- 74

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER 
Sbjct: 75  --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 132

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              Q+  +  +  + +++VSNPPYI      E  ++          +P  +L GG+ G  
Sbjct: 133 FLKQTHLWDRMPTI-EMLVSNPPYIARGYPLEKSVLK---------EPHKALFGGVKGDE 182

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             + I    +    K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 183 ILKEIILLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 233


>gi|261838406|gb|ACX98172.1| s-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori 51]
          Length = 276

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 39/248 (15%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76
           ++R FL       L HE   R   W                 DFY     ++     PRP
Sbjct: 35  KERVFLHTHAYLELNHEEEARFFEWVGKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       D+S KALE+
Sbjct: 95  ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDVSLKALEV 150

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190
           A  N     + ER    ++  +  +  +  +++SNPPYI      E  ++          
Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK--------- 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +    +
Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAEL--KVPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257

Query: 251 KDYGGNDR 258
           KD+ G DR
Sbjct: 258 KDWSGFDR 265


>gi|329767189|ref|ZP_08258716.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
 gi|328836856|gb|EGF86503.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
          Length = 198

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 50/79 (63%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +++  ++ D+G G G + + L K+ P FK   VD++ + LE++K N   N ++   + L+
Sbjct: 55  EKENAKVADIGCGYGVISIFLAKKYPTFKFTMVDVNNRVLELSKKNIELNKINNEVEVLE 114

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           S  F +VEG FD++++NPP
Sbjct: 115 SSSFDNVEGNFDIVLTNPP 133


>gi|325990138|ref|YP_004249837.1| modification methylase, HemK family [Mycoplasma suis KI3806]
 gi|323575223|emb|CBZ40888.1| Modification methylase, HemK family [Mycoplasma suis]
          Length = 280

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 111/232 (47%), Gaps = 35/232 (15%)

Query: 51  IHRILGWRDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL------- 102
           + R+ G R F+N +   L    F PR E+ELLV         RI K D VR L       
Sbjct: 65  LTRLTG-RVFFNKKKWFLFQGVFSPRIESELLV---------RILK-DWVRELNLYSFSY 113

Query: 103 -DLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
            DL +G+G + L++L+E   +  +GV +D S +A +    N+     + + +   +DW  
Sbjct: 114 IDLCSGSGVIFLSVLEELNNYIKRGVAIDSSFRACKNISKNSELLKDNSKIEIYLTDWVK 173

Query: 158 FSSVEGLFDVIVSNPPYI-ESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + +    +DVI  NPPY+ E  +++    CLG      DP+ +L G I+G SHY+ + + 
Sbjct: 174 YLTKNSEWDVITINPPYLSEEELIESREFCLG------DPKWALQGDINGWSHYQKMLEF 227

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +     +      +++++    I +++ LF +  ++DY    R +   R
Sbjct: 228 AKTNSYWKLIIFECSEFHEQLWDKEIKKNKSLFTIRKYRDYLDKFRAIALIR 279


>gi|254779627|ref|YP_003057733.1| Modification methylase HemK [Helicobacter pylori B38]
 gi|254001539|emb|CAX29557.1| Modification methylase HemK [Helicobacter pylori B38]
          Length = 274

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 21/232 (9%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS +ALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPNLSIYASDISPRALEVALKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDG---LSHY 206
              Q+  +  +  + +++VSNPPY    I     LE     +P  +L GG+ G   L   
Sbjct: 165 FLKQTRLWDRMPTI-EMLVSNPPY----IAKGYPLEKSVLKEPHEALFGGVKGDEILKEI 219

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +A G+     K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 220 VFLAAGL-----KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|315586963|gb|ADU41344.1| protoporphyrinogen oxidase [Helicobacter pylori 35A]
          Length = 276

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 101/248 (40%), Gaps = 39/248 (15%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76
           ++R FL       L HE   R   W                 DFY     ++     PRP
Sbjct: 35  KERVFLHTHAYLELNHEEEVRFFEWVERRLNDCPIEYLLESCDFYGHSFFVNEHVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE+
Sbjct: 95  ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDF 190
           A  N     + ER    ++  +  +  +  +++SNPPYI      E  ++          
Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK--------- 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +    +
Sbjct: 201 EPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFY 257

Query: 251 KDYGGNDR 258
           KD+ G DR
Sbjct: 258 KDWSGFDR 265


>gi|269957405|ref|YP_003327194.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269306086|gb|ACZ31636.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 298

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 91/218 (41%), Gaps = 12/218 (5%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH+  +DP           L   + R +  E +  +LGW  F   R  ++   F PR  +
Sbjct: 57  SHEPSLDPG---------LLEALVARRVGGEPLEHVLGWVAFAGRRWAVAPGVFVPRQRS 107

Query: 79  ELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGV--GVDISCKALE 135
           ELLV  ALA   P   +R    ++ DL  G GA+  A+    P    V   VD+   A  
Sbjct: 108 ELLVAQALAAVRPTTAERTTATVVVDLCCGNGALGGAVAAALPGSGVVLHAVDLDRAATA 167

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A  N    G       L +    ++ G  D+++ + PY+ +  V  +  E R+ +P  +
Sbjct: 168 CAAQNLAPFGGVVHTGDLYAPLPLTLRGRVDLLLCHAPYVPTAAVALMPHEAREHEPLTA 227

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           LDGG DGL   R         L   G    E+G + +V
Sbjct: 228 LDGGPDGLEILRRAIWEAPAWLAPGGSLLFEVGDDTQV 265


>gi|325066843|ref|ZP_08125516.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces oris K20]
          Length = 285

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 10/170 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100
           ++R    E +  I+G        L      F  RPETE++  +A+  +   ++    VV 
Sbjct: 59  VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVL 118

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
             DL TG+GA+   + KE P  + V V+IS  A  +A+ N     V  R + + +D    
Sbjct: 119 TADLCTGSGAIAACVAKEVPGARVVAVEISETAASLAREN-CERLVPGRVEVIHADATDP 177

Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204
                + G  DV+VSNPPY+ +  V+    E    +P ++L  GG DGL 
Sbjct: 178 LVLHDLNGQVDVVVSNPPYVPAGAVE--DTETEQHEPTVALYGGGPDGLE 225


>gi|260944776|ref|XP_002616686.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720]
 gi|238850335|gb|EEQ39799.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720]
          Length = 289

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 113/267 (42%), Gaps = 35/267 (13%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L R TG S  +   +   + ++  R   TNA+ R    E +  ILG + F ++ +     
Sbjct: 22  LLRATG-SLERAHSELKWIENELPRHKWTNAVNRRACLEPLQYILGSQPFGSLDILCGRG 80

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE    +  +     I++ +  RILD  TGTG + L L  E P  K    D S
Sbjct: 81  VLIPRWETEEWATAVASI----IKEFESPRILDACTGTGCIPLLLKHELPHAKVQAFDFS 136

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYI------ES 177
             AL +A  N       E+FD   S  +  V       +  FD++ +NPPYI        
Sbjct: 137 EDALRLAGLN------KEKFDIDVSFHYGDVFDSNMKFDHPFDLVTANPPYIPINDYERP 190

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           +++      VR ++PR +L G    L  Y  + D + R     G+   E+GY ++     
Sbjct: 191 MLLSGPEKSVRLYEPRSALVG---HLEFYHALVDNIVRASQCSGII-FELGYEEQAQAT- 245

Query: 238 IFESRKL---FLVNAFKDYGGNDRVLL 261
              + KL   +L   + D  G  R ++
Sbjct: 246 ---AEKLGTAWLCGRYNDSAGRLRCVV 269


>gi|224372757|ref|YP_002607129.1| modification methylase, HemK family [Nautilia profundicola AmH]
 gi|223588590|gb|ACM92326.1| modification methylase, HemK family [Nautilia profundicola AmH]
          Length = 257

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 16/203 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKE 118
           FY  R  +      PR +TE++++ A+     + + K +  +I+D  TG+G + + + K 
Sbjct: 61  FYGDRFYIKEGVLIPRDDTEVVLERAIKLINEKCKTKSEKCKIVDCCTGSGVIAIEIAKH 120

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +   K +  DIS  A+E+A+ N   + V    ++ D L+ +     E   D++VSNPPY+
Sbjct: 121 TNA-KVIATDISDTAIEVAEKNIALHNVDVEVKKCDLLKCE---GEEIKADILVSNPPYV 176

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           E+        +   ++P ++  GG DGL   + +         K  +  +EIGYNQK ++
Sbjct: 177 ENS-----WQKPNVYEPDLAFYGGDDGLDIVKELILKAKDLKYKAAV--IEIGYNQK-NL 228

Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258
           +  F   K      F D  GN R
Sbjct: 229 LSEFLKDKAESFEFFNDLAGNVR 251


>gi|68536430|ref|YP_251135.1| methylase of peptide chain release factors [Corynebacterium
           jeikeium K411]
 gi|68264029|emb|CAI37517.1| methylase of peptide chain release factors [Corynebacterium
           jeikeium K411]
          Length = 308

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 26/259 (10%)

Query: 18  SSHQVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            + +V VDP ++    DD       + + R +  E +  I+G   F  + L +    F P
Sbjct: 50  PTPRVAVDPGALFMRADDPAPSAYADWVARRVAREPLQHIVGSAPFCGLDLFVEPGCFVP 109

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCK 132
           RPETELL D A  F    +  R    ++DL  G GT  + ++ L ++P     G +IS  
Sbjct: 110 RPETELLADWAAHF----LTGRPTPHVVDLCCGPGTLGLGVSFLYDAPISL-TGFEISPA 164

Query: 133 ALEIAKSNA-VTNGVSERF--------DTLQSDWFSSV-EGLF---DVIVSNPPYIESVI 179
           AL +A+ NA +   V+  F        D L+      V  G F   DV+V NPPY+    
Sbjct: 165 ALRLAEKNARLVPQVNATFVQADLAVDDPLEPPATRDVSPGAFAPADVVVCNPPYVPEST 224

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  EV   DP  ++  G DGL     +           G   +E   +    V  + 
Sbjct: 225 E--ISPEVA-ADPHAAVFSGDDGLDLMPRVLQWAEALGRAGGGVGIEHDDSNGAQVAAMM 281

Query: 240 ESRKLFLVNAFKDYGGNDR 258
           + R    +   +D  G  R
Sbjct: 282 QQRGWRDITQHRDLAGRPR 300


>gi|14591489|ref|NP_143569.1| hypothetical protein PH1731 [Pyrococcus horikoshii OT3]
 gi|3258162|dbj|BAA30845.1| 198aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 198

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 18/184 (9%)

Query: 60  FYN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +YN +++  + + +EP  +T LL +S L      ++  D+V  LD+GTGTG + L   + 
Sbjct: 4   YYNGLKIESNEEVYEPAEDTFLLAESLL----DEVKSDDIV--LDVGTGTGILALLAARR 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   VG+DI+ KA+ +A  NA  NG+      L SD F ++ G FD+IV NPPY+   
Sbjct: 58  ARFV--VGLDINEKAINLAWKNAKINGIKNVVFIL-SDLFENIRGTFDLIVFNPPYLP-- 112

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                G E++D    ++L GG  G          V  +L+  G   +       +DV + 
Sbjct: 113 -----GEEIKD-KVDLALIGGKTGGEVISRFLGSVKDYLSSRGRILLIYSSLTGLDVEKA 166

Query: 239 FESR 242
           F+ R
Sbjct: 167 FKER 170


>gi|284931147|gb|ADC31085.1| HemK-like methylase [Mycoplasma gallisepticum str. F]
          Length = 284

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 20/192 (10%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR +T  +++  L     R   +D+V +LD+ TGTG + L + K+ P ++  G DIS  A
Sbjct: 94  PRIDTNAVIEKFLEVINLR---KDIVNVLDICTGTGLIALTIKKQFPKYQVFGSDISKSA 150

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           ++IA  NAV N +  RF   D L+   F  V    D ++ NPPY++  +      E+ ++
Sbjct: 151 VKIANFNAVNNLLDARFYVADYLEV--FEQVSEEIDALIINPPYLDEELKSNYIKEI-NY 207

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L     G   Y  I   ++ +  K  +  +E           I+E      V   
Sbjct: 208 EPFNALFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFS-------EPIYEKT----VQLL 256

Query: 251 KDYGGNDRVLLF 262
           K YG  D+   F
Sbjct: 257 KKYGLYDKTAFF 268


>gi|90422424|ref|YP_530794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisB18]
 gi|90104438|gb|ABD86475.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB18]
          Length = 367

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 6/134 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           V  +LDL TG+G  CLA+L    F       VD S  ALE+A  N     + +R    Q 
Sbjct: 201 VESVLDLCTGSG--CLAVLASQRFPNARIDAVDASPDALEVAAENIDIYELEDRVTLYQG 258

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + +  +D+I+SNPPY+++  +  L  E R  +P ++  GG DGL   R I     
Sbjct: 259 DLFKPLGDTRYDLIISNPPYVDAQGMADLPEECRA-EPELAFFGGEDGLDIVRRILAEAK 317

Query: 215 RHLNKDGLCSVEIG 228
           +HL   G    EIG
Sbjct: 318 QHLTPTGGLLCEIG 331


>gi|42560703|ref|NP_975154.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|42492199|emb|CAE76796.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
          Length = 282

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 31/242 (12%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G   +  ALL +    K
Sbjct: 83  FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172
            +  DIS K+L++A  N       ++F+ + +   S + G F           ++I+ NP
Sbjct: 137 VILTDISYKSLKVANKNI------KKFNLINT---SCLNGNFIDVLIKNNLKANLIICNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230
           PYI+ +    +   V DF+P I+L     GL  Y  +   + + +  NK+ L  +E G+ 
Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246

Query: 231 QK 232
           QK
Sbjct: 247 QK 248


>gi|288929018|ref|ZP_06422864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330002|gb|EFC68587.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 285

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 4/127 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGT 108
           +  +LG  DF      ++     PRPETE L    +    +LP         +LD+GTG+
Sbjct: 58  VQYVLGRADFAGRTFDVAQGVLIPRPETEELCVWIVQTCSNLPVCGTSPT--LLDVGTGS 115

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G +   L  + P ++   +DIS  AL+IA  NA   G   RF    +        L+DVI
Sbjct: 116 GCIATTLALDLPTWRVSAIDISQTALDIAARNAQKLGAEVRFALQDALCMPPDADLWDVI 175

Query: 169 VSNPPYI 175
           VSNPPYI
Sbjct: 176 VSNPPYI 182


>gi|326779715|ref|ZP_08238980.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf.
           griseus XylebKG-1]
 gi|326660048|gb|EGE44894.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf.
           griseus XylebKG-1]
          Length = 270

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L++ + R      +  +LGW DF+  R  +    F PR  TE LV  A A +        
Sbjct: 41  LSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLVARAAALAP------R 94

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL   S   +    D+   A+  A+ N     + +     + D 
Sbjct: 95  RSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRN-----IGDLGHVYEGDL 149

Query: 158 FS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F+    ++ G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   R +A   
Sbjct: 150 FAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGDDGLDVMRRVAAEA 209

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L   G   VE    Q+   V +  +  L
Sbjct: 210 PAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240


>gi|257054787|ref|YP_003132619.1| methylase of polypeptide chain release factors [Saccharomonospora
           viridis DSM 43017]
 gi|256584659|gb|ACU95792.1| methylase of polypeptide chain release factors [Saccharomonospora
           viridis DSM 43017]
          Length = 227

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 6/77 (7%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+GTG+G  AV  A   ES     + VDI+ KALE A+ NA  N V++R +   SD 
Sbjct: 64  RVLDMGTGSGVNAVLAAAEAESV----LAVDINPKALEAARDNARRNDVADRIEVRHSDV 119

Query: 158 FSSVEGLFDVIVSNPPY 174
           FS V+G FD+IV +PP+
Sbjct: 120 FSDVDGRFDLIVFDPPF 136


>gi|182439064|ref|YP_001826783.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178467580|dbj|BAG22100.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 270

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 15/211 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L++ + R      +  +LGW DF+  R  +    F PR  TE LV  A A +        
Sbjct: 41  LSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLVARAAALAP------R 94

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL   S   +    D+   A+  A+ N     + +     + D 
Sbjct: 95  RSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRN-----IGDLGHVYEGDL 149

Query: 158 FS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F+    ++ G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   R +A   
Sbjct: 150 FAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGGDGLDVMRRVAAEA 209

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L   G   VE    Q+   V +  +  L
Sbjct: 210 PAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240


>gi|260577563|ref|ZP_05845502.1| methylase of peptide chain release factor [Corynebacterium jeikeium
           ATCC 43734]
 gi|258604287|gb|EEW17525.1| methylase of peptide chain release factor [Corynebacterium jeikeium
           ATCC 43734]
          Length = 308

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 105/256 (41%), Gaps = 26/256 (10%)

Query: 21  QVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           +V VDP ++    DD       + + R +  E +  I+G   F  + L +    F PRPE
Sbjct: 53  RVAVDPGALFMRADDPAPSAYADWVARRVAREPLQHIVGSAPFCGLDLFVEPGCFVPRPE 112

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           TELL D A  F    +  R    ++DL  G GT  + ++ L ++P     G +IS  AL 
Sbjct: 113 TELLADWAAHF----LTGRPTPHVVDLCCGPGTLGLGVSFLYDAPISL-TGFEISPAALR 167

Query: 136 IAKSNA-VTNGVSERF--------DTLQSDWFSSV-EGLF---DVIVSNPPYIESVIVDC 182
           +A+ NA +   V+  F        D L+      V  G F   DV+V NPPY+       
Sbjct: 168 LAEKNARLVPQVNATFVQADLAVDDPLEPPATRDVSPGAFAPADVVVCNPPYVPESTE-- 225

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  EV   DP  ++  G DGL     +           G   +E   +    V  + + R
Sbjct: 226 ISPEVA-ADPHAAVFSGDDGLDLMPRVLQWAEALGRAGGGVGIEHDDSNGAQVAAMMQQR 284

Query: 243 KLFLVNAFKDYGGNDR 258
               +   +D  G  R
Sbjct: 285 GWRDITQHRDLAGRPR 300


>gi|327312629|ref|YP_004328066.1| HemK familymethyltransferase [Prevotella denticola F0289]
 gi|326945265|gb|AEA21150.1| methyltransferase, HemK family [Prevotella denticola F0289]
          Length = 275

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 26/234 (11%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   + R  + E +  +LG+  F      ++S    PRPETE+L   ++     S   ++
Sbjct: 42  LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRSYCALQ 101

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               +++LD+GTG+G + ++L  +         D+S  AL IA+ N   +    R +   
Sbjct: 102 PPVPLQVLDVGTGSGCIAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 159

Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
            D      +++E  +DVIVSNPPYI +     +   V +++P  +L     D L  YR +
Sbjct: 160 EDALHPSPAAMEQQWDVIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAV 219

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261
           A+   + L+ +G              V  FE+  L++  V    D  G  +V+L
Sbjct: 220 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 259


>gi|188994132|ref|YP_001928384.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277]
 gi|188593812|dbj|BAG32787.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277]
          Length = 293

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 14/209 (6%)

Query: 10  FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            L   TGLS S  ++ D D++L       L+  + R      +   +G   F+     ++
Sbjct: 31  LLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFFGYEFAVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV+  L    P       + +LD+GTG+G + + L +E    K   +D
Sbjct: 91  PSVLIPRPETEELVELILRKERPAAAP---LCLLDVGTGSGCLAITLAREL-RAKVWAMD 146

Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           IS  AL  A++N    G  +R      D L  D    V    D+IVSNPPYI       +
Sbjct: 147 ISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESADM 203

Query: 184 GLEVRDFDPRISLDGG-IDGLSHYRTIAD 211
              V   +P ++L     D L  Y+ IA+
Sbjct: 204 AYHVLGHEPALALFAPEEDPLLFYKAIAN 232


>gi|150399814|ref|YP_001323581.1| putative methylase [Methanococcus vannielii SB]
 gi|150012517|gb|ABR54969.1| putative methylase [Methanococcus vannielii SB]
          Length = 202

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++      + P  ++ELL+++     L  ++ + V   LD+GTG+G   +  LK    
Sbjct: 9   DVKIKTHPKVYVPAEDSELLIEN-----LVDVKNKTV---LDVGTGSGIQAINALKNGAL 60

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               G+DI+  A+E AK+NA  N    ++     SD F ++ G FDVI+ N PY+ +   
Sbjct: 61  MV-YGIDINPYAIECAKNNAEINKCDLKKISFKTSDLFKNISGKFDVILFNAPYLPTSND 119

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           + L   +       + DGG DG         GVS HLN++G+  +
Sbjct: 120 EKLEKYL-----NYAFDGGKDGREVIDNFLLGVSDHLNENGVVQI 159


>gi|317177824|dbj|BAJ55613.1| protoporphyrinogen oxidase [Helicobacter pylori F16]
          Length = 276

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPR 75
            ++R FL       L HE   R   W                 DFY     ++     PR
Sbjct: 34  QKERVFLHTHAYLELNHEEEVRFFEWVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       +IS KALE
Sbjct: 94  PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASEISLKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189
           +A  N     + ER    ++  +  +  +  +++SNPPYI      E  ++         
Sbjct: 150 VASKNIERFNLKERIFLKKTHLWDRMPTV-QMLISNPPYIARGYPLEKSVLK-------- 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +    
Sbjct: 201 -EPHEALFGGVKGDEILKEIIFLAAEL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256

Query: 250 FKDYGGNDR 258
           +KD+ G DR
Sbjct: 257 YKDWSGFDR 265


>gi|170768477|ref|ZP_02902930.1| ribosomal RNA small subunit methyltransferase C [Escherichia
           albertii TW07627]
 gi|170122581|gb|EDS91512.1| ribosomal RNA small subunit methyltransferase C [Escherichia
           albertii TW07627]
          Length = 343

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G GTG + +A  + SP  +    D+S  A+E +++  V NG+    +   S+ FS
Sbjct: 199 KVLDIGCGTGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLVANGIEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|331703154|ref|YP_004399841.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801709|emb|CBW53862.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 282

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 110/242 (45%), Gaps = 31/242 (12%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +        ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQIFDLLKQNYPLAYILKSKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G   +  ALL +    K
Sbjct: 83  FINKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172
            +  DIS KAL++A  N       ++F+   +   S + G F           ++I+ NP
Sbjct: 137 VILTDISYKALKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230
           PYI+ +    +   V +F+P I+L     GL  Y  +   + + +  NK+ L  +E G+ 
Sbjct: 188 PYID-INDQNIDKNVIEFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246

Query: 231 QK 232
           QK
Sbjct: 247 QK 248


>gi|296417256|ref|XP_002838274.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634202|emb|CAZ82465.1| unnamed protein product [Tuber melanosporum]
          Length = 324

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 29/239 (12%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG + F  + +        PRPETE          L  +     VRI+DL TGTG 
Sbjct: 69  LQYLLGTQPFGALEMICERGVLIPRPETEQSASHLGGHMLKHLHPHSQVRIVDLCTGTG- 127

Query: 111 VCLALLKESPFFKG------VGVDISCKALEIAKSNAVTN----------------GVSE 148
            C+ LL  +           +GVDIS KAL  +K N   N                G   
Sbjct: 128 -CIPLLLHNQLSAAGMSSRILGVDISVKALRSSKRNLEHNEKVLSANAREDIEFFGGDVL 186

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISL-DGGIDGLSHY 206
             D+L       ++G+ D+++SNPPYI     +   G  VR+++P+++L   G +G   Y
Sbjct: 187 AVDSLVETIGGKLQGV-DIVISNPPYISKESFNRSTGRSVRNYEPKLALVPKGGNGDIFY 245

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             I   V+  L    + +   G+ Q   V + +    ++  V  +KD+ G  R ++  R
Sbjct: 246 PAIGR-VAESLGSQAVIAEVEGWEQANRVKQEWAGSGVWEGVGIWKDFAGIGRTVVGWR 303


>gi|18978045|ref|NP_579402.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638]
 gi|18893832|gb|AAL81797.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638]
          Length = 201

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 69/117 (58%), Gaps = 9/117 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  +++ +S + +EP  ++ LL +  L       E RD   +LD+GTG+G + L   K+
Sbjct: 4   EYMGLKIEISEEVYEPAEDSFLLAEVLLK------EVRDEDIVLDMGTGSGILALLAAKK 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           + F   VGVDI+ +A++IA  NAV N V      ++SD F ++ G F +IV NPPY+
Sbjct: 58  AKFV--VGVDINERAVDIAWKNAVNNDVKNVI-FVKSDLFENIRGRFSLIVFNPPYL 111


>gi|237801726|ref|ZP_04590187.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024585|gb|EGI04641.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 314

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E  +  QSD 
Sbjct: 135 ISRAVDIGCGTGAGGLLIAVARPDAQVFAVDINPKALHFAQTNAALAGL-ENVECCQSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S V G FD+IV+NPPY++
Sbjct: 194 LSGVTGTFDLIVANPPYMK 212


>gi|170782046|ref|YP_001710378.1| HemK family methyltransferase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156614|emb|CAQ01766.1| putative HemK-family methyltransferase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 274

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 83/197 (42%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LGW  F   R+ +    F PR  TE L  +A+  +     +     ++D+  G+
Sbjct: 54  EPLETVLGWVAFAGRRIIVRPGVFVPRRRTEQLAGAAVEAAAQATRRTGHAVVVDMCCGS 113

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           GA+   +  E P       D+   A+  A  N V  G +     L +     + G  DV+
Sbjct: 114 GAIGAVVADEVPGAVLHAADVDPAAVACAAENLVPRGAAVHRGDLMAALPPELRGRIDVL 173

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+N PY+  V +  +  E R  +P ++ DGG DGL   R +A      L   G   VE+ 
Sbjct: 174 VANVPYVPRVGLALMPPEARLHEPEVTRDGGEDGLDVLRRVAAEGREWLAPTGTVLVEVA 233

Query: 229 YNQKVDVVRIFESRKLF 245
             Q    ++   +  L 
Sbjct: 234 DAQVTGALQAMRAAGLV 250


>gi|329945389|ref|ZP_08293152.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328529011|gb|EGF55942.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 298

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 10/169 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVR 100
           ++R    E +  I+G        L      F  RPETE++  +A+  +   +     VV 
Sbjct: 72  VLRRECREPLQHIIGRMWLRGAELISRPGVFIVRPETEVVAGAAIEAAREVMAGGGGVVL 131

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
             DL TG+GA+   + KE P  + V V+IS  A  +A+ N     V  R + + +D    
Sbjct: 132 TADLCTGSGAIAACVAKEVPGARVVAVEISETAAALAREN-CERLVPGRVEVIHADATDP 190

Query: 158 --FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                + G  DV+VSNPPY+ +  V+    E    +P ++L  GG DGL
Sbjct: 191 LVLHDLNGQVDVVVSNPPYVPAGAVE--DTETAQHEPTVALYGGGPDGL 237


>gi|320592224|gb|EFX04663.1| mitochondrial n-glutamine methyltransferase mtq1 [Grosmannia
           clavigera kw1407]
          Length = 341

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 24/216 (11%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A RD  S L  +  +  H  +   D      +R  +     R  + E +  +LG + F
Sbjct: 23  LPACRDLPSSLAELRWIRQHVAVSRADG--GQPRRAIVQRLCRRRGRGEPLQYVLGTQPF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LK 117
             + L        PRPE E      LA  L R E   V  ILD+ TGTG + L L   L+
Sbjct: 81  GPLDLLCRRGVLIPRPEPEAY-SLFLADWLMRPEIGPVSTILDVCTGTGCIALLLYERLR 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS-------------ERFDTLQSDWF----SS 160
           +    + VG+D+S  A+ +A++N    G                R D    DW     ++
Sbjct: 140 QQQHLRVVGIDVSPAAVALARANRRRLGFPSDRDGTDSSSVSFHRADVFADDWLHLASNA 199

Query: 161 VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195
            +G  DV+V NPPY+            VR F+P+++
Sbjct: 200 ADGRIDVLVCNPPYVSRDGFAHETARSVRLFEPKLA 235


>gi|222081320|ref|YP_002540683.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
 gi|221725999|gb|ACM29088.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
          Length = 247

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 10/179 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKE 118
           F N+   L  +   PR ETELL        + R+ +  V  I+ D+  G G + +A+   
Sbjct: 39  FMNLDFELGPNVLVPRKETELLG----TVCIDRLSQGTVTPIVVDMCCGCGNLGIAIAMN 94

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPP 173
               +    D++ + +++A  N +  G+ +R   +Q D F ++     EG  D+IV NPP
Sbjct: 95  IADAQVWSCDLTPETVDVAWRNVIRFGLQDRMSVVQGDMFENIRSIGLEGRVDLIVCNPP 154

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           YI +  ++     + + +PR + DGG  G+S  + +       L   G  + E G  Q+
Sbjct: 155 YISTGRLEADRAHLLENEPREAFDGGPYGISIQQRLIREAFEFLKPGGWLAFEFGEGQE 213


>gi|47094310|ref|ZP_00232013.1| HemK protein [Listeria monocytogenes str. 4b H7858]
 gi|47017320|gb|EAL08150.1| HemK protein [Listeria monocytogenes str. 4b H7858]
          Length = 146

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/135 (36%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DIS  AL +AK NA+      RF   D L++  F   E  FD+IV+NPPYI       + 
Sbjct: 5   DISAPALAVAKKNALLLNADVRFVETDLLEA--FKQNEERFDMIVANPPYISEAEKAEMS 62

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRK 243
             V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S  
Sbjct: 63  DYVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYP 122

Query: 244 LFLVNAFKDYGGNDR 258
              V   KD    DR
Sbjct: 123 HSTVIIHKDINSKDR 137


>gi|301321173|gb|ADK69816.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 282

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 31/242 (12%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFK 123
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G   +  ALL +    K
Sbjct: 83  FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQN--K 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----------DVIVSNP 172
            +  DIS K+L++A  N       ++F+   +   S + G F           ++I+ NP
Sbjct: 137 VILTDISYKSLKVANKNI------KKFNLTNT---SCLNGNFIDVLIKNNLKANLIICNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYN 230
           PYI+ +    +   V DF+P I+L     GL  Y  +   + + +  NK+ L  +E G+ 
Sbjct: 188 PYID-INDQNIDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWL 246

Query: 231 QK 232
           QK
Sbjct: 247 QK 248


>gi|281421475|ref|ZP_06252474.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM
           18205]
 gi|281404547|gb|EFB35227.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM
           18205]
          Length = 306

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 108/256 (42%), Gaps = 12/256 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G++   +I    + L   +   L   I R  K E +  +LG  DF      +      PR
Sbjct: 47  GMTLTDIICGKVNELSADEERKLEEIIRRLQKGEPVQYVLGEADFAGRTFHVEPGVLIPR 106

Query: 76  PETELLV-----DSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           PET  L      D+     +   E + + +RILD+ TG+G + + L  +    +  G DI
Sbjct: 107 PETAELCEWIEKDATENKGITEGENEENAIRILDICTGSGCIAITLGLDIGGSEVTGWDI 166

Query: 130 SCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           S  AL+IA+ N       N   E  D L+    S   G +++IVSNPPYI       +  
Sbjct: 167 SEDALKIAQGNVALLDAGNVKIEYQDALKLAETSDA-GRWNIIVSNPPYICEKEKADMEK 225

Query: 186 EVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V + +P I+L     + L  YR IA+  S  L   G    EI    + +   + E    
Sbjct: 226 NVLEHEPGIALFVPDEEPLKFYRAIAEYASSALKSGGALYFEINPIYEKETREMLEGLGF 285

Query: 245 FLVNAFKDYGGNDRVL 260
             ++  +D  G  R++
Sbjct: 286 KAIDTKEDAFGKQRMM 301


>gi|15679329|ref|NP_276446.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622435|gb|AAB85807.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 196

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 19/163 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  +++    + +EP  +T LL D+        ++ R+  R+L++GTGTG V    ++ S
Sbjct: 6   YGEIKIKTCENVYEPAEDTFLLADN--------LDVREGDRVLEIGTGTGLVA---IRAS 54

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                   D++  A++  + NA+ NGV  R   LQ D F  VEG  FDVI+ N PY+ + 
Sbjct: 55  EKGDVTATDVNPAAVKCTQENAIINGVELR--VLQGDLFDPVEGEKFDVILFNTPYLPAT 112

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             D  G +V D    ++ +GG DG        D V  HL   G
Sbjct: 113 GDDATG-DVLD----LAWNGGPDGRMVIDRFLDEVPAHLKPGG 150


>gi|308062349|gb|ADO04237.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Cuz20]
          Length = 276

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 31/237 (13%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEARFF--ELVEKRLNDCPIEYLLESCDFYGHSFFVNEHVLIPRPETEILVKKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDG-- 202
              ++  +  +  +  ++VSNPPYI      E  ++          +P  +L GG+ G  
Sbjct: 165 FLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214

Query: 203 -LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            L     +A  +     K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 215 ILKEIVFLAAAL-----KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|34540018|ref|NP_904497.1| HemK family modification methylase [Porphyromonas gingivalis W83]
 gi|34396329|gb|AAQ65396.1| modification methylase, HemK family [Porphyromonas gingivalis W83]
          Length = 293

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 16/260 (6%)

Query: 10  FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            L   TGLS S  ++ D D++L       L+  + R      +   +G   F+     ++
Sbjct: 31  LLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGIPLQYAVGHAPFFGYEFAVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV+  L    P       + +LD+GTG+G + + L +E    K   +D
Sbjct: 91  PSVLIPRPETEELVELILRKERPAAAS---LCLLDVGTGSGCLAITLAREL-RAKVWAMD 146

Query: 129 ISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           IS  AL  A++N    G  +R      D L  D    V    D+IVSNPPYI       +
Sbjct: 147 ISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESADM 203

Query: 184 GLEVRDFDPRISLDGG-IDGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
              V   +P ++L     D L  Y+ IA+   S  L   G   VE+          +F +
Sbjct: 204 AYHVLGHEPALALFAPEEDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVFSA 263

Query: 242 RKLFL-VNAFKDYGGNDRVL 260
           +  +  V    D  G  R L
Sbjct: 264 KVGWCEVRLHTDLSGKSRFL 283


>gi|109947073|ref|YP_664301.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba]
 gi|109714294|emb|CAJ99302.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba]
          Length = 276

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 22/180 (12%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L+ R+       + + L    I  +L    FY     ++     PRPETE+LV  AL   
Sbjct: 48  LNHREEMRFFELVKKRLNDYPIEYLLESCSFYGRSFFVNEHVLIPRPETEILVQKALDI- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              I +  +  + ++G G+G + ++L  E+P       DIS  ALE+A  N       ER
Sbjct: 107 ---ISQYHLKEVGEIGIGSGCISVSLALENPNLSIYASDISQNALEVASKNI------ER 157

Query: 150 FDTLQSDWFSSVEGLFD------VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202
           FD L+   F     L+D      ++VSNPPYI +   +D   L+    +P  +L GGI G
Sbjct: 158 FD-LKKCLFLKKTHLWDHMPTTPMLVSNPPYIAKGYPLDKSVLK----EPHEALFGGIKG 212


>gi|163940957|ref|YP_001645841.1| HemK family modification methylase [Bacillus weihenstephanensis
           KBAB4]
 gi|229134149|ref|ZP_04262968.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196]
 gi|163863154|gb|ABY44213.1| modification methylase, HemK family [Bacillus weihenstephanensis
           KBAB4]
 gi|228649322|gb|EEL05338.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196]
          Length = 258

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 8/190 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV      S      R    I+DL  G+GA
Sbjct: 49  LEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEVLS------RSSDIIVDLCCGSGA 102

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V  AL       +   VDI   A++ A  N VTN     F+  L      S++G  +++V
Sbjct: 103 VGAALAAALGRVELYSVDIDPIAVQCASRN-VTNFGGRAFEGDLYKALPDSLKGHVNILV 161

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ + I+  L  E R ++P ++LDGG DGL+  R +A+     L  DG   +E   
Sbjct: 162 ANVPYVPTEIIKFLPREARLYEPNVTLDGGEDGLNILRRVAEEALLWLALDGHLLIETSE 221

Query: 230 NQKVDVVRIF 239
            Q      IF
Sbjct: 222 VQAPQAFEIF 231


>gi|222036112|emb|CAP78857.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           LF82]
 gi|312948999|gb|ADR29826.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 343

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++   TNGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|317182326|dbj|BAJ60110.1| protoporphyrinogen oxidase [Helicobacter pylori F57]
          Length = 274

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 101/251 (40%), Gaps = 43/251 (17%)

Query: 32  DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75
            ++R FL       L HE                 I  +L   DFY     ++     PR
Sbjct: 34  QKERVFLHTHAYLELNHEEEVHFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE
Sbjct: 94  PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF----- 190
           +A  N     + ER    ++  +  +  +  +++SNPPYI            RD+     
Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYI-----------ARDYPLEKS 197

Query: 191 ---DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +  
Sbjct: 198 VLKEPHEALFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDA 254

Query: 248 NAFKDYGGNDR 258
             +KD  G DR
Sbjct: 255 KFYKDLSGFDR 265


>gi|213028960|ref|ZP_03343407.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 85

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E I  + G R+F+++ L +S  T  PRP+TE LV+ ALA  LP        RILD
Sbjct: 1   RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALA-RLP----VKTCRILD 55

Query: 104 LGTGTGAVCLALLKESPFFKGVGVD 128
           LGTGTGA+ LAL  E P  +   VD
Sbjct: 56  LGTGTGAIALALACERPDCEVTAVD 80


>gi|317180127|dbj|BAJ57913.1| protoporphyrinogen oxidase [Helicobacter pylori F32]
          Length = 276

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 39/249 (15%)

Query: 32  DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75
            ++R FL       L HE                 I  +L   DFY     ++     PR
Sbjct: 34  QKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLKSCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE
Sbjct: 94  PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189
           +A  N     + ER    ++  +  +  +  +++SNPPYI      E  ++         
Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK-------- 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P  +L GG+ G    + I    +    K    + E+GY+Q   +    E    +    
Sbjct: 201 -EPHEALFGGVKGDEILKEIIFLAAEL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256

Query: 250 FKDYGGNDR 258
           +KD+ G DR
Sbjct: 257 YKDWSGFDR 265


>gi|325268455|ref|ZP_08135085.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis
           DSM 16608]
 gi|324988983|gb|EGC20936.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis
           DSM 16608]
          Length = 287

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 26/234 (11%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   + R  + E +  +LG+  F      ++S    PRPETE+L   ++         ++
Sbjct: 54  LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRPYCALQ 113

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               +++LD+GTG+G V ++L  +         D+S  AL IA+ N   +    R +   
Sbjct: 114 PPVPLQVLDVGTGSGCVAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 171

Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
            D      +++E  +D+IVSNPPYI +     +   V +++P  +L     D L  YR I
Sbjct: 172 EDALHPSPAAMERQWDIIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAI 231

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261
           A+   + L+ +G              V  FE+  L++  V    D  G  +V+L
Sbjct: 232 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 271


>gi|282861510|ref|ZP_06270574.1| modification methylase, HemK family [Streptomyces sp. ACTE]
 gi|282563326|gb|EFB68864.1| modification methylase, HemK family [Streptomyces sp. ACTE]
          Length = 262

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 9/196 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +    +  +LGW +F  +R+ +    F PR  TE LV  A+A +        
Sbjct: 42  LAALVSRRVDGLPLEHVLGWAEFCGIRVAVGPGVFVPRRRTEFLVRQAVAAAP------A 95

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156
              ++DL  G+GA+  AL    P  +    D+   A+  A+ N    G+ E ++  L + 
Sbjct: 96  RPVVVDLCCGSGALGAALATALPAAELHAADVDPAAVRYARRN--LAGLGEVYEGDLFAP 153

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              S+ G  DV+++N PY+ +  V+ L  E R  +PR +LDGG DGL   R +A      
Sbjct: 154 LPGSLRGRVDVLLANVPYVPTHDVELLPAEARVHEPRAALDGGGDGLDVMRRVAAAAPGW 213

Query: 217 LNKDGLCSVEIGYNQK 232
           L   G   VE    Q 
Sbjct: 214 LAPGGSLLVETSERQA 229


>gi|91214024|ref|YP_544010.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UTI89]
 gi|117626683|ref|YP_860006.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli APEC
           O1]
 gi|122421235|sp|Q1R2D5|RSMC_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712946|sp|A1AJP2|RSMC_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91075598|gb|ABE10479.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           UTI89]
 gi|115515807|gb|ABJ03882.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           APEC O1]
 gi|294491814|gb|ADE90570.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           IHE3034]
 gi|307629539|gb|ADN73843.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UM146]
 gi|323950544|gb|EGB46422.1| methyltransferase small domain-containing protein [Escherichia coli
           H252]
          Length = 343

 Score = 62.4 bits (150), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++   TNGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|218692758|ref|YP_002400970.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ED1a]
 gi|226712942|sp|B7MTB6|RSMC_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218430322|emb|CAR11192.1| 16S RNA m2G1207 methylase [Escherichia coli ED1a]
          Length = 343

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++   TNGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|317178623|dbj|BAJ56411.1| protoporphyrinogen oxidase [Helicobacter pylori F30]
          Length = 276

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 99/243 (40%), Gaps = 29/243 (11%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWR----------------DFYNVRLTLSSDTFEPRP 76
           ++R FL       L HE       W                 DFY     ++     PRP
Sbjct: 35  KERVFLHTHTYLELNHEEEVHFFEWVEKRLNDYPIEYLLESCDFYGRSFFVNEHVLIPRP 94

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE+
Sbjct: 95  ETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKALEV 150

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRIS 195
           A  N     + ER    ++  +  +  +  +++SNPPY    I     LE     +P  +
Sbjct: 151 ASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPY----IARGYPLEKSVLKEPHEA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG+ G    + I    +    K    + E+GY+Q   +    E    +    +KD+ G
Sbjct: 206 LFGGVKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDWSG 262

Query: 256 NDR 258
            DR
Sbjct: 263 FDR 265


>gi|313886071|ref|ZP_07819809.1| methyltransferase, HemK family [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924601|gb|EFR35372.1| methyltransferase, HemK family [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 298

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  ILG   F +  L
Sbjct: 33  SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 92

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  L            +R+LD+G G+  + + +    P ++  
Sbjct: 93  TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 149

Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
            +D S +AL  A  N    GV+ +      FD        +     D++VSNPPYI    
Sbjct: 150 AMDQSEQALYYAAQNVRQTGVAVQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPECD 209

Query: 180 VDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215
              +   V + +P+ +L     D L +YR +A  V +
Sbjct: 210 KATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQ 246


>gi|110644807|ref|YP_672537.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 536]
 gi|191174543|ref|ZP_03036040.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           F11]
 gi|300992719|ref|ZP_07179996.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|123147328|sp|Q0T8U3|RSMC_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110346399|gb|ABG72636.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           536]
 gi|190905189|gb|EDV64831.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           F11]
 gi|300305215|gb|EFJ59735.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|323189785|gb|EFZ75063.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           RN587/1]
 gi|324007717|gb|EGB76936.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
 gi|324014050|gb|EGB83269.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
          Length = 343

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++   TNGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|306815434|ref|ZP_07449583.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           NC101]
 gi|305851096|gb|EFM51551.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           NC101]
          Length = 343

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++   TNGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|332299427|ref|YP_004441348.1| modification methylase, HemK family [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176490|gb|AEE12180.1| modification methylase, HemK family [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 302

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 11/217 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  ILG   F +  L
Sbjct: 37  SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  L            +R+LD+G G+  + + +    P ++  
Sbjct: 97  TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 153

Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
            +D S +AL  A  N    GV+ +      FD        +     D++VSNPPYI    
Sbjct: 154 AMDQSEQALYYAAQNVRQTGVAVQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPECD 213

Query: 180 VDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215
              +   V + +P+ +L     D L +YR +A  V +
Sbjct: 214 KATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQ 250


>gi|88703454|ref|ZP_01101170.1| Hypothetical adenine-specific methylase [Congregibacter litoralis
           KT71]
 gi|88702168|gb|EAQ99271.1| Hypothetical adenine-specific methylase [Congregibacter litoralis
           KT71]
          Length = 321

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 5/207 (2%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV DD     L     R L+ + +  + G   F  +          PR     L+ +  A
Sbjct: 78  SVSDDGWATTLAWLQERILERKPLPYVTGRAWFAGLEFLCDERALVPRSPLAELIRNNYA 137

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              P         +LDL  G G + +A     P  + V  DI   AL +A+ N   + V+
Sbjct: 138 ---PWWTGESPQSLLDLCCGGGCIGIAAAVHQPNLEVVIADIDEAALTLARENIGLHKVA 194

Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R    QSD    ++G  FD+I+ NPPY+++  +  +  E    +P ++L  G DGL   
Sbjct: 195 ARVSAAQSDLLDDLQGSRFDIILCNPPYVDAEDLAAMPAEFL-AEPPLALGSGSDGLDIS 253

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKV 233
           R +   V  +L   GL  +E+G + + 
Sbjct: 254 RRLLRNVGDYLTPRGLLFLEVGNSWEA 280


>gi|307825498|ref|ZP_07655716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylobacter tundripaludum SV96]
 gi|307733384|gb|EFO04243.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylobacter tundripaludum SV96]
          Length = 310

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 31/245 (12%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
           ++L  V  L+  Q ++D   ++D R    +  A    L HE+I        F  +   + 
Sbjct: 61  AYLESVLTLTERQAVID---MIDRRINERIPAAY---LTHEAI--------FAGLSFYVD 106

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PR     L++   A   P +++  VVRILDL TG+  + +A            VD
Sbjct: 107 ERVLVPRSPIAELIEQRFA---PWVDEEQVVRILDLCTGSACIAIACAYAFADAYVDAVD 163

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  AL +A+ N   + +++     QSD F  + +  +D+IVSNPPY+     + L  E 
Sbjct: 164 LSADALAVAELNVAKHQLADAVTLYQSDLFKELPDTRYDIIVSNPPYVCLEEWEQLPAEF 223

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R  +P +   GG  GL     I     ++L   G+  VE+G + +             L 
Sbjct: 224 RA-EPDMGFKGGHTGLDIVLRILVDADQYLADQGILVVEVGSSAET------------LQ 270

Query: 248 NAFKD 252
           NAF D
Sbjct: 271 NAFPD 275


>gi|12045114|ref|NP_072925.1| HemK family modification methylase [Mycoplasma genitalium G37]
 gi|255660258|ref|ZP_05405667.1| HemK family modification methylase [Mycoplasma genitalium G37]
 gi|2496352|sp|Q49404|Y259_MYCGE RecName: Full=Uncharacterized protein MG259
 gi|1045951|gb|AAC71479.1| modification methylase, HemK family [Mycoplasma genitalium G37]
 gi|166078831|gb|ABY79449.1| modification methylase, HemK family [synthetic Mycoplasma
           genitalium JCVI-1.0]
          Length = 456

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 22/167 (13%)

Query: 38  LTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           LT+ I + LK   I +I     LG      +        F PR ++  L+ S        
Sbjct: 52  LTDKIKQQLKCYFIEKIPLPYLLGTIQLRKLTFKTKKGVFIPRIDSLALIAS-------- 103

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  + +   LDL  G+G + +AL K+       G DI  +AL++A+ NA+ N VS   + 
Sbjct: 104 VNLKKIKTALDLCCGSGTLAIALKKKCDTLDVYGSDIDIQALKLAQQNALINNVS--INW 161

Query: 153 LQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           +++DW   F+ ++   D+IV+NPPY++   ++    +  +++P+ SL
Sbjct: 162 IEADWFDCFNKIKTPIDLIVTNPPYLKKTQLN----KTLNYEPKHSL 204


>gi|38233636|ref|NP_939403.1| HemK family methytransferase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199896|emb|CAE49562.1| HemK-family methytransferase [Corynebacterium diphtheriae]
          Length = 272

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 9/185 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  IL    F  + L +    F PRPETE+L D A+  +    +  D+V  
Sbjct: 56  VERRKNREPLQHILQVTWFGPLELHVGPGVFIPRPETEVLADWAVRHT----DSEDIV-- 109

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DL TG+GA+   +  E P      V++S  A+  A+ N        + D    +    +
Sbjct: 110 VDLCTGSGALAAYIAHEHPECSVWAVELSDAAMAFARRNLPDRVHLVQGDVTDPEILDHL 169

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  D++VSNPPY+   + + L  EV   DP +++  G  G+     +   + R L   G
Sbjct: 170 SGAVDLLVSNPPYVP--LSNDLEPEVYQ-DPSMAVFSGDSGMDTINAMIPVIYRLLAPGG 226

Query: 222 LCSVE 226
           L  +E
Sbjct: 227 LVGIE 231


>gi|57641608|ref|YP_184086.1| N5-glutamine methyltransferase, HemK family [Thermococcus
           kodakarensis KOD1]
 gi|57159932|dbj|BAD85862.1| N5-glutamine methyltransferase, HemK family [Thermococcus
           kodakarensis KOD1]
          Length = 194

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 11/117 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  +R+ L    +EP  +T LL ++ LA  +  I        LD+GTGTG + L L ++
Sbjct: 4   EYQGLRIKLHPQVYEPAEDTFLLAEN-LAVKVGDIA-------LDMGTGTGIIALLLARK 55

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           + +   +GVDI+  A+E+A+ NA  NG+    +   SD F +V G FDVI  N PY+
Sbjct: 56  ARWV--LGVDINPLAVELARENARINGII-NVEFRLSDLFENVSGEFDVITFNAPYL 109


>gi|323975871|gb|EGB70967.1| methyltransferase small domain-containing protein [Escherichia coli
           TW10509]
          Length = 343

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ E +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHEGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|300928502|ref|ZP_07144028.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 187-1]
 gi|300463497|gb|EFK26990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 187-1]
          Length = 172

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 2/124 (1%)

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164
           TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  +  + 
Sbjct: 3   TGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQ 62

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L  DG+  
Sbjct: 63  YDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLADDGVLI 121

Query: 225 VEIG 228
            E+G
Sbjct: 122 CEVG 125


>gi|294786651|ref|ZP_06751905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parascardovia denticolens F0305]
 gi|315226254|ref|ZP_07868042.1| methyltransferase [Parascardovia denticolens DSM 10105]
 gi|294485484|gb|EFG33118.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parascardovia denticolens F0305]
 gi|315120386|gb|EFT83518.1| methyltransferase [Parascardovia denticolens DSM 10105]
          Length = 327

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 20/239 (8%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR- 96
           L   + R    E +  I+G   F  + + +    F PR ETE LV   L +    ++++ 
Sbjct: 88  LQERVGRRAAREPLQYIIGKAPFRYLTVAVGPGVFIPRQETETLVQIGLDW----VDEQA 143

Query: 97  -DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA-----VTNGVSE 148
            D   ILDL  G+G V LA + E    K     V+I  +A+   + N          +  
Sbjct: 144 IDAPVILDLCAGSGVVGLAAVTELQARKAQVYAVEIDDQAIAWTRKNRDQILWSRPELKS 203

Query: 149 RFDTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DG 202
           R+  +Q+D       + ++   D++++NPPY+    +     EVRD+DP ++L GG  DG
Sbjct: 204 RYQLVQADASSPQTLAQLDDQADLVLTNPPYVPLTQIPQQP-EVRDYDPDVALYGGSDDG 262

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L     I    +  L   GL  +E   +Q   +V    S      +   D  G DR L+
Sbjct: 263 LVIPEKIVRRAAAFLRPGGLLVMEHDSSQSHALVSFATSVGFSQAHTAPDLTGRDRFLV 321


>gi|302345995|ref|YP_003814348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica ATCC 25845]
 gi|302149582|gb|ADK95844.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica ATCC 25845]
          Length = 287

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   I+R  + E +  +LG   F      ++     PRPETE+L   ++         ++
Sbjct: 54  LEKIILRLERSEPVQYVLGRETFCGRTFHVAPGVLIPRPETEVLCRWIEEDNNGCYCALQ 113

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151
               +++LD+GTG+G + + L  +         DIS  AL IA+ N     V       D
Sbjct: 114 PPAPLQVLDVGTGSGCIAVTLAADLRNSAVTAWDISGDALLIARENVHQWQVRVELKMED 173

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIA 210
            L     ++++  FD+IVSNPPYI       +   V  ++P  +L     D L  YR IA
Sbjct: 174 ALHPS-AAAMQQQFDIIVSNPPYICDKERTGMAKNVLAYEPETALFVPDDDPLRFYRAIA 232

Query: 211 DGVSRHLNKDGLCSVE 226
           +   + L+ DG+   E
Sbjct: 233 EYGVQALSADGVLYFE 248


>gi|319779618|ref|YP_004130531.1| Hypothetical adenine-specific methylase yfcB [Taylorella
           equigenitalis MCE9]
 gi|317109642|gb|ADU92388.1| Hypothetical adenine-specific methylase yfcB [Taylorella
           equigenitalis MCE9]
          Length = 313

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 64/105 (60%), Gaps = 3/105 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+ TG+G + + +    PF +  GVDIS  A++IAK N   + V + F  + SD FS
Sbjct: 138 KILDMCTGSGCLGILVALIYPFAEVDGVDISDAAIKIAKLNKDKHNV-QNFHPIVSDLFS 196

Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            + +  +D+I+ NPPY+ SV +  L  E   ++P+++L GG  G+
Sbjct: 197 FNPDYKYDLIICNPPYVNSVSMQNLPPEY-GYEPQLALAGGEKGM 240


>gi|7476090|pir||T09985 protoporphyrinogen oxidase homolog - Mycobacterium leprae
 gi|699335|gb|AAA63096.1| hemK [Mycobacterium leprae]
          Length = 191

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (5%)

Query: 34  QRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           + FF   ++A+    +   +  ++G   F  V L +  D F PRPETE ++   +A  LP
Sbjct: 51  EEFFRRYSDAVAARSRRVPLQHLIGTVSFGPVVLHVGPDVFIPRPETEAILAWVMAQRLP 110

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150
              +R V  I+D  TG+GA+ +AL    P  + +G+D S  AL+ A+ NA    V   R 
Sbjct: 111 ---ERPV--IVDACTGSGALAVALAHHRPAARVIGIDDSDSALDYARRNAEGTAVECVRA 165

Query: 151 DTLQSDWFSSVEGLFDVIVSNP 172
           D         ++G  D+ V+ P
Sbjct: 166 DVTTPALLPELDGCVDLFVAQP 187


>gi|238060789|ref|ZP_04605498.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
 gi|237882600|gb|EEP71428.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
          Length = 329

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 30/207 (14%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRD 97
           + R +  E +  + G   F ++ L +    F PRPETELL    VD A      R+   D
Sbjct: 55  VARRVAREPLQHLTGKAAFRHLELAVGPGVFVPRPETELLAGWGVDQA------RLRACD 108

Query: 98  VVR-----------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                         ++DL +G+GA+ LA+ +E+P  + V V+ S  AL   + NA     
Sbjct: 109 PTAGGGQGATGGPLVVDLCSGSGAIALAVAQEAPAARVVAVERSPAALAWLRRNAADRAA 168

Query: 147 SER-------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +          D         + G  DV++ NPPY+   +   +  EV   DP  ++ GG
Sbjct: 169 AGDRPVEVVAADVTDPGLLGELVGRVDVLLCNPPYVPRAVQ--VPPEVAAHDPDEAVFGG 226

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVE 226
            DGL   R +    ++ L   G+  VE
Sbjct: 227 ADGLDVIRPVLARAAQLLRPGGVLGVE 253


>gi|325973694|ref|YP_004250758.1| hypothetical protein MSU_0868 [Mycoplasma suis str. Illinois]
 gi|323652296|gb|ADX98378.1| conserved hypothetical protein [Mycoplasma suis str. Illinois]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 32/171 (18%)

Query: 58  RDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-------LDLGTGTG 109
           R F+N +   L    F PR E+ELLV         RI K  V  +       +DL +G+G
Sbjct: 71  RVFFNQKKWFLFQGVFSPRIESELLV---------RILKDWVKELNLYSFSYIDLCSGSG 121

Query: 110 AVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLF 165
            + L++L+E  S   +GV +D S +A +    N+  +  + + +   +DW  + +    +
Sbjct: 122 VIFLSVLEELNSYIKRGVAIDSSFRACKNISKNSELSKDNSKIEIYLTDWVKYLTKNSEW 181

Query: 166 DVIVSNPPYIESVIVD-----CLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           DVI  NPPY+    +      CLG      DP+ +L G + G SHY+ + +
Sbjct: 182 DVITINPPYLSEKELKESKEFCLG------DPKWALQGALQGWSHYQKMLE 226


>gi|309390256|gb|ADO78136.1| methyltransferase small [Halanaerobium praevalens DSM 2228]
          Length = 239

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 6/97 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L  +  ++ + D  +++DLGTG+G + L L  ++P  K  GV+I  +A  +A+ N  
Sbjct: 26  DSVLLANFVKLRRGD--QVIDLGTGSGVIPLLLAYKNPEIKVTGVEIQAEAAALAQKNVE 83

Query: 143 TNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYI 175
            N +SE+ + +  D  +       G FDV+VSNPPY+
Sbjct: 84  FNNLSEQIEIVNQDLCTLDSKYKTGSFDVVVSNPPYL 120


>gi|308063857|gb|ADO05744.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Sat464]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L+ ++       + + L    I  +L   DFY     ++     PRPETE+LV  AL   
Sbjct: 48  LNHKEEVCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNKHVLIPRPETEILVKKALDI- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              I +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER
Sbjct: 107 ---ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKER 163

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201
               ++  +  +  +  ++VSNPPYI            RD+        +P  +L GG+ 
Sbjct: 164 VFLKKTRLWDRMPTI-QMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVK 211

Query: 202 G 202
           G
Sbjct: 212 G 212


>gi|262366650|gb|ACY63207.1| hypothetical protein YPD8_2534 [Yersinia pestis D182038]
          Length = 254

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  +   ++SD F 
Sbjct: 135 HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVTPIRSDLFR 194

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            +  + +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R I
Sbjct: 195 DLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLARRI 244


>gi|325860412|ref|ZP_08173524.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A]
 gi|325482070|gb|EGC85091.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A]
          Length = 275

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 105/234 (44%), Gaps = 26/234 (11%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   + R  + E +  +LG+  F      ++S    PRPETE+L   ++         ++
Sbjct: 42  LEKIMSRLERAEPVQYVLGYAMFCGRPFHVASGVLIPRPETEVLCRWIEEDYNRPYCALQ 101

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               +++LD+GTG+G + ++L  +         D+S  AL IA+ N   +    R +   
Sbjct: 102 PPVPLQVLDVGTGSGCIAVSLALDLYNSALTAWDVSGDALLIAREN--IHRWDARVELKM 159

Query: 155 SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
            D      +++E  +D+IVSNPPYI +     +   V +++P  +L     D L  YR +
Sbjct: 160 EDALHPSPAAMEQQWDIIVSNPPYICNRERAAMAANVLEYEPETALFVPDDDPLQFYRAV 219

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLL 261
           A+   + L+ +G              V  FE+  L++  V    D  G  +V+L
Sbjct: 220 AEYGVQTLSDEG--------------VLYFETNPLYINKVKEMLDESGYKQVML 259


>gi|297380251|gb|ADI35138.1| methyltransferase, HemK family [Helicobacter pylori v225d]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 7/145 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEARFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175
              ++  +  +  +  +++SNPPYI
Sbjct: 165 FLKKTHLWDRMPTI-QMLISNPPYI 188


>gi|297570957|ref|YP_003696731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931304|gb|ADH92112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 281

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 14/239 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D +  +  R F    I R    E +  I+G   F  + L      F  RPETE++  + L
Sbjct: 43  DLITPEHAREFAAT-ITRRASFEPVQHIMGKMWFRYLELASRPGVFIVRPETEMVAQAGL 101

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK--GVGVDISCKALEIAKSNAVTN 144
             +L ++   + V ++DL TG+GA+ +A+  E P  +   V  D +  AL  A +    N
Sbjct: 102 D-ALEKMTVENPV-VVDLCTGSGAIAIAIATEKPRTRVWAVERDETAYALATANNERYGN 159

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
            V+      +++  + +E   D++++NPPY+       L  +V   DP ++L  GG DGL
Sbjct: 160 RVTIVHGDARTE-LAHLESAVDLLITNPPYVPR--TQELPADVHR-DPDLALYGGGDDGL 215

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVL 260
              RT+       L   G+  +E G  Q   +V   E+ +    +A+  +D  G DR L
Sbjct: 216 DVPRTLVHRAHTLLRPGGVFVMEHGDEQGPALV--AEAIETGFTHAYTGRDLTGRDRWL 272


>gi|308183178|ref|YP_003927305.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4]
 gi|308065363|gb|ADO07255.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4]
          Length = 276

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 25/234 (10%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  RFF    + + L    I  +L   DFY     ++     PRPETE+LV  AL    
Sbjct: 51  EEEVRFF--ELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVKKALDI-- 106

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I +  +  I ++G G+  V ++L  E+P       DIS K LE+A  N     + ER 
Sbjct: 107 --ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISPKVLEVASKNIERFNLKERV 164

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              ++  +  +  +  ++VSNPPYI      E  ++          +P  +L GG+ G  
Sbjct: 165 FLKKTHLWDRMPTI-QMLVSNPPYIARGYPLEKSVLK---------EPHEALFGGVKGDE 214

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             + I    +R   K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 215 ILKEIVFLSARL--KIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|237729269|ref|ZP_04559750.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
 gi|226908998|gb|EEH94916.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
          Length = 343

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +AL   SP  +    D+S  A+E +++    NG+    D + S+ FS
Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAAAVEASRATLAANGIEG--DVIASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 DVTGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|110808160|ref|YP_691680.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 5
           str. 8401]
 gi|122956950|sp|Q0SX40|RSMC_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110617708|gb|ABF06375.1| putative enzyme [Shigella flexneri 5 str. 8401]
          Length = 343

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVES--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|183220544|ref|YP_001838540.1| modification methylase HemK [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910654|ref|YP_001962209.1| polypeptide chain release factor methylase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775330|gb|ABZ93631.1| Methylase of polypeptide chain release factors [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778966|gb|ABZ97264.1| Modification methylase HemK [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 295

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 6/159 (3%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVR 100
           IV   K + +  I G + F+     +S D   PRPETE LVD         R E  D  +
Sbjct: 66  IVERSKRKPVAYITGKKGFHQFEYLVSEDVLIPRPETEELVDFLFKQKETLRTEFPDGFQ 125

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT---NGVSERFDTLQSDW 157
           I DL +G+G + L+L +       V  DIS +A++ +K+NA      G+      L    
Sbjct: 126 IWDLCSGSGCIGLSLSQLLEPKAVVLSDISEEAIQQSKANAEKYQLTGIQFYVSNLDESL 185

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            + +   FD+IVSNPPYI       +  +V D++P ++L
Sbjct: 186 PNHLR--FDIIVSNPPYIPDSEKKDIMPDVLDYEPHLAL 222


>gi|258647711|ref|ZP_05735180.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC
           51259]
 gi|260852548|gb|EEX72417.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC
           51259]
          Length = 280

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 90/216 (41%), Gaps = 16/216 (7%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +LG   F      +S     PRPETE LV  A        E       LD+GTG+
Sbjct: 80  EPVQYVLGATYFDGRPFYVSPAVLIPRPETEELVRWA-------AEAARGQHFLDVGTGS 132

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + ++L    P       DIS +A+++A  NA   G   +F+    D F++      V+
Sbjct: 133 GCIAISLKLRRPEASVHAWDISPEAIDVACKNAECLGADVQFEV--QDLFTAPPKSATVV 190

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           VSNPPYI       +   V +F+P  +L     D L +Y+ +A   +  +       VEI
Sbjct: 191 VSNPPYICEKERAEMAAHVVNFEPVQALFVPDDDPLRYYKALAQLGAEEV------FVEI 244

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
               +      F +     +   KD  G DR +  C
Sbjct: 245 NAALRQATADAFRAAGYQQIVCRKDEFGKDRFIYAC 280


>gi|159905280|ref|YP_001548942.1| methylase [Methanococcus maripaludis C6]
 gi|159886773|gb|ABX01710.1| methylase [Methanococcus maripaludis C6]
          Length = 202

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+      + P  ++ELL+++     L  ++ + V   LD+GTG+G   +  +K+    
Sbjct: 10  IRIKTHPKVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKQGAS- 60

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           K +G+DI+  A+E AK NA  N + S++     SD F +++  FDVI+ N PY+ +   +
Sbjct: 61  KVIGIDINPYAVECAKINAELNEIDSKKLSFKTSDLFRNIDEKFDVILFNAPYLPTSDEE 120

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L   +       + DGG DG        D V+ +LN++G   +
Sbjct: 121 KLEKYL-----NYAFDGGKDGREVLDKFLDDVANYLNENGTVQI 159


>gi|261839806|gb|ACX99571.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 52]
          Length = 276

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 101/249 (40%), Gaps = 39/249 (15%)

Query: 32  DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75
            ++R FL       L HE                 I  +L   DFY     ++     PR
Sbjct: 34  QKERVFLHTHAYLELNHEEEACFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE
Sbjct: 94  PETEILVKKALDV----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRD 189
           +A  N     + ER    ++  +  +  +  +++SNPPYI      E  ++         
Sbjct: 150 VASKNIERFNLKERVFLKKTHLWDRMPTI-QMLISNPPYIARGYPLEKSVLK-------- 200

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P  +L GGI G    + I    +    K    + E+GY+Q   +    E    +    
Sbjct: 201 -EPHEALFGGIKGDEILKEIIFLAAE--LKIPFLACEMGYDQLKSLKECLEFCG-YDAEF 256

Query: 250 FKDYGGNDR 258
           +KD  G DR
Sbjct: 257 YKDLSGFDR 265


>gi|241895206|ref|ZP_04782502.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
 gi|241871512|gb|EER75263.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
          Length = 212

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLG G G V ++L K  P    V  +I+ +A+E+   NA  N V+++   +QSD + 
Sbjct: 68  KILDLGAGYGPVAISLAKVMPERAFVAAEINARAVELVARNAEQNHVAQQISVIQSDRYE 127

Query: 160 SVEGLFDVIVSNPP 173
            V G F  I++NPP
Sbjct: 128 HVSGKFAAILTNPP 141


>gi|323939813|gb|EGB36015.1| methyltransferase small domain-containing protein [Escherichia coli
           E482]
          Length = 343

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G+G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGSGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|6946701|dbj|BAA90668.1| protoporphyrinogen oxidase [Porphyromonas gingivalis]
          Length = 293

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 20/262 (7%)

Query: 10  FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            L   T LS S  ++ D D++L       L+  + R      +   +G   F      ++
Sbjct: 31  LLTEATSLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFLGHEFAVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVG 126
                PRPETE LV+  L     R E+   V   +LD+GTG+G + + L +E    K   
Sbjct: 91  PSVLIPRPETEELVELIL-----RKERPAAVPLCLLDVGTGSGCLAITLAREL-RAKVWA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERF-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +DIS  AL  A++N    G  +R      D L  D    V    D+IVSNPPYI      
Sbjct: 145 MDISSDALATARANV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESA 201

Query: 182 CLGLEVRDFDPRISLDGGI-DGLSHYRTIAD-GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            +   V   +P ++L     D L  Y+ IA+   S  L   G   VE+          +F
Sbjct: 202 DMAYHVLGHEPALALFAPEDDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVF 261

Query: 240 ESRKLFL-VNAFKDYGGNDRVL 260
            +++ +  V    D  G  R L
Sbjct: 262 SAKEGWCEVRLHADLSGKSRFL 283


>gi|241889584|ref|ZP_04776882.1| methyltransferase small [Gemella haemolysans ATCC 10379]
 gi|241863206|gb|EER67590.1| methyltransferase small [Gemella haemolysans ATCC 10379]
          Length = 198

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 48/78 (61%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  +++D+G G G + + L K+ P +K   VD++ + LE++K N   N +    + L+S
Sbjct: 56  KENAKVVDIGCGYGVISIFLAKKYPTYKFTMVDVNNRVLELSKKNIELNKIENEVEVLES 115

Query: 156 DWFSSVEGLFDVIVSNPP 173
             F +V G FD++++NPP
Sbjct: 116 SSFDNVVGTFDIVLTNPP 133


>gi|227503859|ref|ZP_03933908.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940]
 gi|227199482|gb|EEI79530.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940]
          Length = 296

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 28/203 (13%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD-------------SALAFS 89
            R    E +  ILG   F  + L +    F PRPETE+L D             +  A +
Sbjct: 63  ARRAAREPLQHILGTAWFGPLELEVGPGVFIPRPETEVLADWGVRMLRDVAKHTAPTALT 122

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +P        R++DL TG+GA+   +  E P  +   V++S +A   A+ N ++    E 
Sbjct: 123 VPASPP----RVVDLCTGSGALAGYVKHEMPEAEVYAVELSDEAFSYAQRN-LSRVAGEG 177

Query: 150 FDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGL 203
              +Q D  +      ++G  D++++NPPY+     +   LE   + DP +++ GG DG+
Sbjct: 178 LRLVQGDATAPATLRKLDGSVDLVLTNPPYVP----ETPDLEPEVYHDPHMAVFGGEDGM 233

Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226
           +    +   ++  L   G   +E
Sbjct: 234 AIINRLVPRIAELLKPGGRVGIE 256


>gi|283783534|ref|YP_003374288.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis 409-05]
 gi|283441994|gb|ADB14460.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis 409-05]
          Length = 304

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 24/182 (13%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E +  I+G   F  + L +    F PRPETE++V++ L +   R      + +
Sbjct: 66  ISRRASREPLQHIVGRAPFRYLDLQVGKGVFVPRPETEIVVEAGLDWL--RESGISKLTV 123

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQ 154
           +DL  G+GA+ L++  E    +   V+ S +A +  + N            +  R+  + 
Sbjct: 124 VDLCAGSGAIGLSIAAEVADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVL 183

Query: 155 SDWFSS-----------VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-ID 201
           +D   S           + G  D++++NPPY+ ES + +   +EVR++DP ++L GG  D
Sbjct: 184 ADATKSHISDCTPELHAICGKVDLVITNPPYVPESQVPE--QVEVREYDPPVALYGGSAD 241

Query: 202 GL 203
           GL
Sbjct: 242 GL 243


>gi|158315911|ref|YP_001508419.1| HemK family modification methylase [Frankia sp. EAN1pec]
 gi|158111316|gb|ABW13513.1| modification methylase, HemK family [Frankia sp. EAN1pec]
          Length = 305

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100
           + R      +  +LGW  F  +R+ +    F PR  TE LVD A A         D  R 
Sbjct: 65  VARRASGLPLEHVLGWVSFRGLRVAVDERVFVPRRRTEFLVDRAAAILAAGATVGDRARS 124

Query: 101 -----ILDLGTGTGAVCLALLK--ESPF-FKGVGVD---ISCKALEIAKSNAVTNGVSER 149
                ++DL  G+GAV  AL      P       VD   ++C    +     +T      
Sbjct: 125 AVGWVVVDLCCGSGAVGAALASAVRGPVDLHAADVDPVAVACARRNLTGPARITPAPGRV 184

Query: 150 FDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           +   L +     + G  D++V+N PY+ +  +  L  E R  +PR +LDGG DGL   R 
Sbjct: 185 YTGDLYAPLPPVLRGRVDLLVANVPYVPTGRLGLLPPEARVHEPREALDGGSDGLDMLRR 244

Query: 209 IADGVSRHLNKDGLCSVEIGYNQK 232
           +A   +  L   G   VE    Q 
Sbjct: 245 VAAEATDWLAPGGSLLVETSRAQA 268


>gi|330983270|gb|EGH81373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 187

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRI-----LGWRDFYNVRLTLSSDTFEPRPETELL 81
           DS LD R      + + R +K     R+     LG   F  +   +      PR     L
Sbjct: 13  DSYLDCRLEVDEISDLQRLIKRRIDERVPTPYLLGEAWFCGLSFIVDDRVLIPRSPIAEL 72

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++   A  L      +  RILDL TG+G + +A  +  P  +    D+S  ALE+A  N 
Sbjct: 73  IEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNI 128

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
             +G+ +R  T+Q D F  + G  FD+IVSNPPY+++
Sbjct: 129 ERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDA 165


>gi|288803442|ref|ZP_06408874.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica D18]
 gi|288334052|gb|EFC72495.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica D18]
          Length = 275

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 6/195 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   I+R  + E +  +LG   F      ++     PRPETE+L   ++         ++
Sbjct: 42  LEKIILRLERSEPVQYVLGRETFCGRTFHVAPGVLIPRPETEVLCRWIEEDYNRPYCALQ 101

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDT 152
               +++LD+GTG+G + + L  +         DIS  AL +A+ N     V    + + 
Sbjct: 102 PPMPLQVLDVGTGSGCIAVTLAADLRNSAVTAWDISGDALLVARENVHQWQVRVELKMED 161

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIAD 211
           +     S+++  FDVIVSNPPYI       +   V  ++P  +L     D L  YR IA+
Sbjct: 162 VLHPSASAMQQKFDVIVSNPPYICDKERTEMEGNVLAYEPETALFVPDDDPLRFYRAIAE 221

Query: 212 GVSRHLNKDGLCSVE 226
              + L+ DG+   E
Sbjct: 222 YGVQALSADGVLYFE 236


>gi|217034309|ref|ZP_03439725.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10]
 gi|216943194|gb|EEC22661.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10]
          Length = 276

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 96/222 (43%), Gaps = 39/222 (17%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  +L   DFY     ++     PRPETE+LV  AL      I +  + +I ++G G+  
Sbjct: 69  IEYLLESCDFYGHSFFVNEHVLIPRPETEILVKKALDI----ISQYHLKKIGEIGIGSAC 124

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---- 166
           V ++L  E+P       DIS KALE+A  N       ERF+ L+   F     L+D    
Sbjct: 125 VSVSLALENPKISIHASDISPKALEVASKNI------ERFN-LKDRVFLKKTHLWDRMPT 177

Query: 167 --VIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGIDGLSHYRTIADGVSRH 216
             ++VSNPPYI            RD+        +P  +L GG+ G    + I    +  
Sbjct: 178 IQMLVSNPPYI-----------ARDYPLEKSVLKEPHEALFGGVKGDEILKEIIFLAAE- 225

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             K    + E+GY+Q   +    E    +    +KD  G DR
Sbjct: 226 -LKIPFLACEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|157147620|ref|YP_001454940.1| 16S ribosomal RNA m2G1207 methyltransferase [Citrobacter koseri
           ATCC BAA-895]
 gi|226712936|sp|A8ALZ1|RSMC_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157084825|gb|ABV14503.1| hypothetical protein CKO_03420 [Citrobacter koseri ATCC BAA-895]
          Length = 342

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 DVKGRFDMIISNPPFHDGI--------------QTSLDAA-------QTLIHGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|186939583|dbj|BAG31010.1| putative methylase [Bosea sp. AJ110407]
          Length = 330

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 8/140 (5%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFD 151
           E   V R+LDL TG+   CLA++    F       V++S  AL++A+ N     + +R  
Sbjct: 160 EPEAVDRVLDLCTGSA--CLAIIAAGRFPNAEVDAVELSPDALDVARLNVADYDLDDRVH 217

Query: 152 TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             Q D F  ++G  +D+I++NPPY+ +  V     E    +P+++   G DGL     I 
Sbjct: 218 LFQGDLFVPLDGQRYDLIIANPPYVTAEEVAAFPPEYAS-EPQMAHIAGNDGLDLVHRIL 276

Query: 211 DGVSRHLNKDG--LCSVEIG 228
                HLN  G  LC V  G
Sbjct: 277 AQARNHLNPGGGLLCEVGTG 296


>gi|303243768|ref|ZP_07330109.1| methylase [Methanothermococcus okinawensis IH1]
 gi|302486010|gb|EFL48933.1| methylase [Methanothermococcus okinawensis IH1]
          Length = 210

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 27/183 (14%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           +IL  +D   + +   S  +EP  ++ELL+D+     L  ++ + V   LD+GTGTG   
Sbjct: 2   KILKIKD---ILIKTHSKVYEPAEDSELLLDN-----LVNVKNKTV---LDVGTGTGIQA 50

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL------ 164
           +  +K+      +GVD++  ++EIAK NA+ N +    +    +SD F +++ +      
Sbjct: 51  INAIKKGAKI-VIGVDVNPYSIEIAKENALLNKLELNRNIFFFKSDLFKNMDEIMDKLNI 109

Query: 165 --FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FDVI+ N PY+ +   + L   +       + DGGIDG          VS +L ++G+
Sbjct: 110 KKFDVILFNAPYLPTSEEEKLEKYL-----NYAFDGGIDGRQVLDRFIHKVSHYLEENGI 164

Query: 223 CSV 225
             +
Sbjct: 165 IQI 167


>gi|169838091|ref|ZP_02871279.1| Methyltransferase [candidate division TM7 single-cell isolate TM7a]
          Length = 268

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109
           +  +L  ++FY  +  +      PR +TE+LV+  +     ++ K ++  +ILD+G G+G
Sbjct: 69  VQYLLNEQEFYGRKFYVDKGVLIPRQDTEILVEKMIDILKDKVLKNEIHPKILDIGVGSG 128

Query: 110 AV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFD 166
            +    AL  ES +   +GVDIS KALE A+ N     VS     L+SD F +VE   FD
Sbjct: 129 IIGITAALEIESSYV--LGVDISDKALETAQKNKEILKVS-NIKFLKSDLFENVEFREFD 185

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +IVSNPPYI    V  +  +    +P  +L    DGL     I   V RHL
Sbjct: 186 MIVSNPPYISLNEVGIMSDDTLLHEPSEALFAENDGLYF---IMKFVRRHL 233


>gi|256828516|ref|YP_003157244.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028]
 gi|256577692|gb|ACU88828.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028]
          Length = 268

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 5/79 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LDLGTG G V L L  + P F G+G+D++   L  A+ NA   G +ERF  L++D   
Sbjct: 45  RVLDLGTGCGVVGLGLALDHPDFFGIGLDLNPDMLCHARENACRLGFAERFALLRADACG 104

Query: 157 -WFSSVEGLFDVIVSNPPY 174
            W  + E + D+++SNPPY
Sbjct: 105 PWGFAPESM-DLVLSNPPY 122


>gi|321310998|ref|YP_004193327.1| hypothetical protein HF1_14800 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802842|emb|CBY93488.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford
           1]
          Length = 276

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 12/172 (6%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGTG 107
           +I RI     F+     L  D F PR ETEL+V+  +      P ++K + V   DL  G
Sbjct: 65  TIERICKKVFFHKHEFILHDDVFCPRNETELIVEYLNQEIKEDPALKKSNYV---DLCAG 121

Query: 108 TGAVCLAL-LKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGL 164
           TG + +++ L+   FFK +  VDIS +A++  K N     +  +   ++ DW+  + E  
Sbjct: 122 TGVIGISIALQNEGFFKKIALVDISEEAIKNIKENCAKYNL--KASVVKQDWYEYLQENG 179

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            DVI +N PY+     D +   + + +P  +L    DG  HY  +   + R+
Sbjct: 180 ADVITANFPYVSK--EDDMDEHIMESEPDWALFADNDGWEHYDKVLKFIDRN 229


>gi|225164775|ref|ZP_03727005.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae
           bacterium TAV2]
 gi|224800606|gb|EEG18972.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae
           bacterium TAV2]
          Length = 266

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 89  SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +LPR+    V    + D+ TG+G + + L  + P  +   +D+S  AL++A  N   + +
Sbjct: 81  TLPRLFPSGVTPQNLADVCTGSGCLAVLLAHQFPSARVDALDLSRDALDVAAINIRNHKL 140

Query: 147 SERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           + R     SD   ++        +D+I+SNPPY  S  VD    E +  +PR++ DGG D
Sbjct: 141 TTRVHLHASDVLDALPPPPLGPTYDLILSNPPYEPSAHVDNQAPEFK-AEPRLAHDGGPD 199

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           GL   R +       L   GL  +E+G  +K 
Sbjct: 200 GLIIIRKLLRQARDRLAPHGLVLMEVGALRKA 231


>gi|24115600|ref|NP_710110.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
           str. 301]
 gi|30065609|ref|NP_839780.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
           str. 2457T]
 gi|81837976|sp|Q820Z6|RSMC_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|24054937|gb|AAN45817.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30043873|gb|AAP19592.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|281603708|gb|ADA76692.1| RRNA (Guanine-N(2)-)-methyltransferase [Shigella flexneri 2002017]
 gi|313646274|gb|EFS10736.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           2a str. 2457T]
 gi|332748881|gb|EGJ79305.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           4343-70]
 gi|332749133|gb|EGJ79556.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-671]
 gi|332749660|gb|EGJ80076.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           2747-71]
 gi|332768755|gb|EGJ98934.1| 16S rRNA methyltransferase [Shigella flexneri 2930-71]
 gi|333009463|gb|EGK28919.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-218]
 gi|333022399|gb|EGK41637.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-304]
          Length = 343

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|333010461|gb|EGK29894.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           VA-6]
          Length = 343

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGCFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|237718552|ref|ZP_04549033.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293373068|ref|ZP_06619436.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC
           3f]
 gi|229452012|gb|EEO57803.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631954|gb|EFF50564.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC
           3f]
          Length = 236

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 87/169 (51%), Gaps = 17/169 (10%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L++ S P    V ++I   A+  A+ N + +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLVQRSLPDANIVALEIDEAAVGQARENIIRSPWKERVEVVQADFR 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     VD L       D + +     D L+ Y  + +GVS  
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEDLLEGVSGL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261
           L ++G  +V I  +    V +I   +KL+ V   N     GG   RVL+
Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|262282350|ref|ZP_06060118.1| methyltransferase domain-containing protein [Streptococcus sp.
           2_1_36FAA]
 gi|262261641|gb|EEY80339.1| methyltransferase domain-containing protein [Streptococcus sp.
           2_1_36FAA]
          Length = 197

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDLG G G + L L+K S   K   VDI+ +AL++A+ NA  NGVS   +  QS+ +  
Sbjct: 61  ILDLGCGYGPLGLTLVK-SQAVKATLVDINLRALDLARKNAELNGVSA--EIFQSNIYDQ 117

Query: 161 VEGLFDVIVSNPP 173
           V G+FD I+SNPP
Sbjct: 118 VTGVFDHIISNPP 130


>gi|194434182|ref|ZP_03066450.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1012]
 gi|194417619|gb|EDX33720.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1012]
 gi|320179333|gb|EFW54291.1| Ribosomal RNA small subunit methyltransferase C [Shigella boydii
           ATCC 9905]
 gi|332083687|gb|EGI88905.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 155-74]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDIGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|28872664|ref|NP_795283.1| hypothetical protein PSPTO_5559 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855920|gb|AAO58978.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 324

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R  D+G GTGA  L +    P  +   VDI+ KAL  A++NAV  G+ +  +   SD 
Sbjct: 145 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 203

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 204 LSGLTGNFDLIVANPPYMK 222


>gi|330964404|gb|EGH64664.1| hypothetical protein PSYAC_07090 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 301

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R  D+G GTGA  L +    P  +   VDI+ KAL  A++NAV  G+ +  +   SD 
Sbjct: 122 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 180

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 181 LSGLTGNFDLIVANPPYMK 199


>gi|260858545|ref|YP_003232436.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
           11368]
 gi|257757194|dbj|BAI28696.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
           11368]
 gi|323157742|gb|EFZ43847.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           EPECa14]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNN 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|215489682|ref|YP_002332113.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215267754|emb|CAS12216.1| 16S rRNA m2G1207 methylase [Escherichia coli O127:H6 str. E2348/69]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|188527854|ref|YP_001910541.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470]
 gi|188144094|gb|ACD48511.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470]
          Length = 276

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 32  DRQRFFLTNAIVRSLKHES----------------IHRILGWRDFYNVRLTLSSDTFEPR 75
            ++R FL       L HE                 I  +L   DFY     ++     PR
Sbjct: 34  QKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  AL      I +  +  I ++G G+  V ++L  E+P       DIS KALE
Sbjct: 94  PETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALE 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +A  N     + ER    ++  +  +  +  ++VSNPPYI
Sbjct: 150 VASKNIERFNLKERVFLKKTRLWDRMPTI-QMLVSNPPYI 188


>gi|193070621|ref|ZP_03051559.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E110019]
 gi|192956104|gb|EDV86569.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E110019]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|330878207|gb|EGH12356.1| hypothetical protein PSYMP_20644 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 301

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R  D+G GTGA  L +    P  +   VDI+ KAL  A++NAV  G+ +  +   SD 
Sbjct: 122 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-QNMECCHSDI 180

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 181 LSGLTGNFDLIVANPPYMK 199


>gi|299752052|ref|XP_002911717.1| modification methylase [Coprinopsis cinerea okayama7#130]
 gi|298409656|gb|EFI28223.1| modification methylase [Coprinopsis cinerea okayama7#130]
          Length = 252

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 65/134 (48%), Gaps = 19/134 (14%)

Query: 101 ILDLGTGTGAVCLALLKESP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSD 156
           +LDLGTG+G + L L +  P       GVDIS  AL +A  NA   G+  R D++  ++ 
Sbjct: 29  LLDLGTGSGCIPLLLCRLWPQGSLSATGVDISPHALSLANENAALCGIPPRSDSMTPRNT 88

Query: 157 WFSSVEGLF---------------DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           + +S+                   D+++SNPPYI       L   V +F+   +L GG  
Sbjct: 89  FRTSLANFLANDFPGTHLSSALPIDILISNPPYIPWDEYLELPESVVNFEDPKALFGGPS 148

Query: 202 GLSHYRTIADGVSR 215
           GL HY  IA  ++R
Sbjct: 149 GLEHYEAIARLLTR 162


>gi|309704829|emb|CBJ04180.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           ETEC H10407]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|254037381|ref|ZP_04871458.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           1_1_43]
 gi|226840487|gb|EEH72489.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           1_1_43]
 gi|323935213|gb|EGB31573.1| methyltransferase small domain-containing protein [Escherichia coli
           E1520]
          Length = 343

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|257068137|ref|YP_003154392.1| putative methylase of HemK family [Brachybacterium faecium DSM
           4810]
 gi|256558955|gb|ACU84802.1| putative methylase of HemK family [Brachybacterium faecium DSM
           4810]
          Length = 270

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 5/190 (2%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R    E +  +LG  + +  +L++    F PR  T LL++     +L     R    +
Sbjct: 51  VRRRTAGEFLEHVLGAVEIFGEKLSVGPGVFVPRQRTALLIER----TLDACRGRAAPTV 106

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L+   G   +   + +  P  +   +D    AL  A+ N   +  + R ++L +    ++
Sbjct: 107 LEACCGVAPIAALVARRHPSAQVHAMDRDETALRHAQKNLPASARTHRAESL-AGLPPAL 165

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  DV+ + PPY+    +  +  E RD +PR +L GG DGL+  R +      +L   G
Sbjct: 166 LGRVDVLAAVPPYVPEGELAHMPREARDHEPRAALLGGPDGLAVVRRLLRDAPPYLAAGG 225

Query: 222 LCSVEIGYNQ 231
              +E+  +Q
Sbjct: 226 ELLLEMHRDQ 235


>gi|332346417|gb|AEE59751.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           UMNK88]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|301330281|ref|ZP_07222935.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
 gi|300843740|gb|EFK71500.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|300939355|ref|ZP_07154023.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300455759|gb|EFK19252.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|191167391|ref|ZP_03029206.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           B7A]
 gi|256025289|ref|ZP_05439154.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia sp.
           4_1_40B]
 gi|190902531|gb|EDV62265.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           B7A]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|304315450|ref|YP_003850597.1| methyltransferase [Methanothermobacter marburgensis str. Marburg]
 gi|302588909|gb|ADL59284.1| predicted methyltransferase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 228

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 21/164 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + ++++    D +EP  +T LL D+        +E  +  R+L++GTGTG V +   K S
Sbjct: 4   YGDLKIETCRDVYEPAEDTFLLADN--------LEVGEGERVLEIGTGTGLVAI---KAS 52

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                   DI+  A+E A+ NAV NG   R   LQ D F  V G  FDVI+ N PY+   
Sbjct: 53  EKADVTATDINPAAVECARKNAVLNGSGLR--VLQGDLFDPVRGEKFDVILFNTPYLP-- 108

Query: 179 IVDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               +G E + +    ++ +GG DG        D V+ HL   G
Sbjct: 109 ----VGEEDITEGSIDLAWNGGPDGRRVIDRFLDDVAEHLKPGG 148


>gi|283835035|ref|ZP_06354776.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
           youngae ATCC 29220]
 gi|291069324|gb|EFE07433.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
           youngae ATCC 29220]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +AL   SP  +    D+S  A+E +++    NGV    + + S+ FS
Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAAAVEASRATLAANGVEG--NVIASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+ +       GL+        SLD         +T+  G  RHLN 
Sbjct: 257 DVTGRFDMIISNPPFHD-------GLQT-------SLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|229589292|ref|YP_002871411.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
 gi|229361158|emb|CAY48021.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
          Length = 286

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 35/258 (13%)

Query: 23  IVDPDSVLD----------DRQRFF--LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           + DPD+ LD          D+QR       A+        +  I+G   F  + L + S 
Sbjct: 23  VWDPDNDLDSLVDRFIVRADKQRALDEFRLAVSERCNRIPLGHIVGTVAFDELSLVVGSG 82

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F PRP +     + +   L   E      +LDL  G+GA+ LA+ +  P      +D++
Sbjct: 83  VFIPRPHS-----TVIHKWLDETELATGTCVLDLCAGSGAIGLAIARRRP-----DLDVT 132

Query: 131 CKALEIAKSNAVTNGVSE-----------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           C   E    N +   ++            + D   +  F+       +IV+NPPY+    
Sbjct: 133 CVEREDVAVNYLKRNIARLATKNVQVSAAQADVYDTKAFARFRQQVGLIVANPPYVPQKA 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  E  D  P+ ++  G DGL   R I    +  L  DG   +E G +Q   V  +F
Sbjct: 193 Q--LQPEWGDHHPKAAVYSGTDGLDLTRQIITLATTLLTPDGWLVIEHGEDQASAVRELF 250

Query: 240 ESRKLFLVNAFKDYGGND 257
           E  +L  +    D   +D
Sbjct: 251 EQHQLTEIRTVIDRQASD 268


>gi|218698207|ref|YP_002405874.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           55989]
 gi|237704107|ref|ZP_04534588.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           3_2_53FAA]
 gi|260847187|ref|YP_003224965.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
           12009]
 gi|300905357|ref|ZP_07123127.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301303471|ref|ZP_07209594.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|226712939|sp|B7LEL6|RSMC_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218354939|emb|CAV02161.1| 16S RNA m2G1207 methylase [Escherichia coli 55989]
 gi|226902019|gb|EEH88278.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           3_2_53FAA]
 gi|257762334|dbj|BAI33831.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
           12009]
 gi|281181513|dbj|BAI57843.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           SE15]
 gi|300402766|gb|EFJ86304.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300841198|gb|EFK68958.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|315255771|gb|EFU35739.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
 gi|315284963|gb|EFU44408.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|323163257|gb|EFZ49088.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E128010]
 gi|323955326|gb|EGB51098.1| methyltransferase small domain-containing protein [Escherichia coli
           H263]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|315616262|gb|EFU96881.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           3431]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|218708048|ref|YP_002415567.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UMN026]
 gi|293403039|ref|ZP_06647136.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1412]
 gi|298378566|ref|ZP_06988450.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1302]
 gi|300899328|ref|ZP_07117593.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|301027007|ref|ZP_07190391.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
 gi|226712948|sp|B7NH38|RSMC_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218435145|emb|CAR16103.1| 16S RNA m2G1207 methylase [Escherichia coli UMN026]
 gi|291429954|gb|EFF02968.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1412]
 gi|298280900|gb|EFI22401.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1302]
 gi|300357063|gb|EFJ72933.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|300395231|gb|EFJ78769.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|16132189|ref|NP_418788.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|82779621|ref|YP_405970.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella dysenteriae
           Sd197]
 gi|89111078|ref|AP_004858.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170083756|ref|YP_001733076.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|218561546|ref|YP_002394459.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli S88]
 gi|238903457|ref|YP_002929253.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
 gi|253775000|ref|YP_003037831.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254164296|ref|YP_003047406.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
           str. REL606]
 gi|293417843|ref|ZP_06660465.1| rsmC [Escherichia coli B185]
 gi|309787410|ref|ZP_07682022.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1617]
 gi|312970060|ref|ZP_07784242.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1827-70]
 gi|732118|sp|P39406|RSMC_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123560843|sp|Q327M6|RSMC_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712938|sp|B7MNC1|RSMC_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712944|sp|B1XFI0|RSMC_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|537211|gb|AAA97267.1| ORF_f343b [Escherichia coli str. K-12 substr. MG1655]
 gi|1790830|gb|AAC77324.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|81243769|gb|ABB64479.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|85677109|dbj|BAE78359.1| 16S RNA m2G1207 methylase [Escherichia coli str. K12 substr. W3110]
 gi|169891591|gb|ACB05298.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|218368315|emb|CAR06134.1| 16S RNA m2G1207 methylase [Escherichia coli S88]
 gi|238859733|gb|ACR61731.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
 gi|242379893|emb|CAQ34729.1| 16S rRNA m[2]G1207 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253326044|gb|ACT30646.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253976199|gb|ACT41870.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
           str. REL606]
 gi|253980356|gb|ACT46026.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           BL21(DE3)]
 gi|260450819|gb|ACX41241.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1]
 gi|291430561|gb|EFF03559.1| rsmC [Escherichia coli B185]
 gi|308924988|gb|EFP70483.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1617]
 gi|310337558|gb|EFQ02669.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1827-70]
 gi|315138923|dbj|BAJ46082.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli DH1]
 gi|323171382|gb|EFZ57029.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           LT-68]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|331681354|ref|ZP_08381991.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H299]
 gi|331081575|gb|EGI52736.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H299]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|156551603|ref|XP_001602665.1| PREDICTED: similar to ENSANGP00000004037 [Nasonia vitripennis]
          Length = 215

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 19/203 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVD 128
           +EP  ++ L++D AL   L + E       L++G G+G V  AL   L++  F   +G+D
Sbjct: 17  YEPSEDSFLVID-ALEMDLQQFESSKPAMCLEIGIGSGVVITALAMALQKYCFSYFLGID 75

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLE 186
           I+ +A ++ +     N V    +T+Q D  SS+  + +FD+I+ NPPY+ +       LE
Sbjct: 76  INPQACKVTRKTCAINKVD--IETVQMDLLSSMCRKNIFDIIIFNPPYVVTE-----PLE 128

Query: 187 VRDFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRK 243
           V D D  IS    GG  G      +   + + L+++GL   + I  N+  D++++FES  
Sbjct: 129 VLD-DRFISKTWAGGHKGRQVMDRLFPLIPQLLSENGLFYLLVIKENEPHDIIQLFESLN 187

Query: 244 L--FLVNAFKDYGGNDRVLLFCR 264
           +   +V   K  G +  VL F R
Sbjct: 188 MTGTIVAERKIRGEHLHVLRFKR 210


>gi|333011350|gb|EGK30764.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-272]
 gi|333012245|gb|EGK31627.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-227]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|315638261|ref|ZP_07893442.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis
           JV21]
 gi|315481608|gb|EFU72231.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis
           JV21]
          Length = 265

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 22/258 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC +       + ++ +   D+R+ F     ++R  K  E    +    DFY +   +  
Sbjct: 25  LCELLQKDRTWLFLNENLEFDEREYF----ELIRRFKEGEPYEYLFKKADFYGLEFHIEK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ++E+L++  L  +     K  +   L++G G+G + + L K     K    DI
Sbjct: 81  GVLIPRYDSEILLEKLLELT----HKEKLQNALEIGFGSGILSIILAKNLKL-KIKACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186
           + KAL+IA  NA  + V    D + SD F  +E   G FD+I SNPPYI++     L   
Sbjct: 136 NEKALKIALKNAKKHEVL--IDFVLSD-FEKLELRKGEFDLIFSNPPYIKNSY--PLDKW 190

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V++ +P+ +L GG  G      I   +  +  +    + E GY+QK  + +I ++   F 
Sbjct: 191 VQN-EPKNALLGGEKGYEILEKII--IFAYQKEAKFLACEFGYDQKEILSQILDTYN-FK 246

Query: 247 VNAFKDYGGNDRVLLFCR 264
              FKD  G DR  +  R
Sbjct: 247 AEFFKDENGFDRAFVAKR 264


>gi|331666038|ref|ZP_08366932.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA143]
 gi|331057089|gb|EGI29083.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA143]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|304383731|ref|ZP_07366190.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM
           16973]
 gi|304335255|gb|EFM01526.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM
           16973]
          Length = 280

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 24/168 (14%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           +VT LS+H V               L   ++R  + E +  +LG   FY    T+S    
Sbjct: 42  KVTQLSAHAVAE-------------LRKIMMRLEQAEPVQYVLGKACFYGRSFTVSQGVL 88

Query: 73  EPRPETE----LLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            PRPETE     ++++ L+ FS P         +LD+GTG+G +   L    P       
Sbjct: 89  IPRPETEDLCTWVIETVLSSFSCPE------PCLLDIGTGSGCIAATLALNIPHAHVSAW 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           DIS +AL +A++N      S     + +    S    +++IVSNPPYI
Sbjct: 143 DISPEALVVARANVKALKASVDVAEVDALNLPSDSDRWEIIVSNPPYI 190


>gi|170021670|ref|YP_001726624.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ATCC
           8739]
 gi|188494749|ref|ZP_03002019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           53638]
 gi|291285749|ref|YP_003502567.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
 gi|300918454|ref|ZP_07135051.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300932046|ref|ZP_07147341.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|300946754|ref|ZP_07161002.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300959114|ref|ZP_07171200.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|301646887|ref|ZP_07246733.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|307136569|ref|ZP_07495925.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli H736]
 gi|312966083|ref|ZP_07780309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           2362-75]
 gi|331640412|ref|ZP_08341560.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H736]
 gi|226712947|sp|B1IS49|RSMC_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169756598|gb|ACA79297.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|188489948|gb|EDU65051.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           53638]
 gi|209748988|gb|ACI72801.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748994|gb|ACI72804.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|284924549|emb|CBG37688.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           042]
 gi|290765622|gb|ADD59583.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
 gi|300314262|gb|EFJ64046.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|300414377|gb|EFJ97687.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300453578|gb|EFK17198.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300460191|gb|EFK23684.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|301074940|gb|EFK89746.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|312289326|gb|EFR17220.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           2362-75]
 gi|320644112|gb|EFX13187.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H- str. 493-89]
 gi|320649429|gb|EFX17965.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H- str. H 2687]
 gi|320654830|gb|EFX22799.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320660682|gb|EFX28143.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320665519|gb|EFX32569.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323960144|gb|EGB55788.1| methyltransferase small domain-containing protein [Escherichia coli
           H489]
 gi|323965372|gb|EGB60828.1| methyltransferase small domain-containing protein [Escherichia coli
           M863]
 gi|327250301|gb|EGE62020.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           STEC_7v]
 gi|331040158|gb|EGI12365.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H736]
          Length = 343

 Score = 60.5 bits (145), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|332083363|gb|EGI88594.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           5216-82]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDIGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EIFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|298675524|ref|YP_003727274.1| methylase [Methanohalobium evestigatum Z-7303]
 gi|298288512|gb|ADI74478.1| methylase [Methanohalobium evestigatum Z-7303]
          Length = 200

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 18/159 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R+    + +EP  +T LL DSA  +       +D + IL++GTGTG V  A+LK +   
Sbjct: 9   TRVQFVDNVYEPAEDTFLLTDSAFNYI------KDGMNILEIGTGTGFVS-AVLKNNFEV 61

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V  +I+  A + A+SN V    +  FD L+          FD+I+ NPPY+ +   + 
Sbjct: 62  NIVSTEINPDAAQCARSNDVEVIRTNMFDGLKPIQ------CFDLILFNPPYLPTSDDEK 115

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +   +       + DGG+DG    R   D V  +L  DG
Sbjct: 116 VPGWMN-----YAYDGGVDGCDAIRNFLDNVCNYLKPDG 149


>gi|15804942|ref|NP_290984.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 EDL933]
 gi|15834583|ref|NP_313356.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750994|ref|ZP_02776016.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4113]
 gi|168766650|ref|ZP_02791657.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776653|ref|ZP_02801660.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4196]
 gi|168781658|ref|ZP_02806665.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4076]
 gi|168785012|ref|ZP_02810019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC869]
 gi|168797941|ref|ZP_02822948.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC508]
 gi|195937642|ref|ZP_03083024.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806907|ref|ZP_03249244.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814485|ref|ZP_03255814.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819277|ref|ZP_03259597.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398157|ref|YP_002273891.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326219|ref|ZP_03442303.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. TW14588]
 gi|254796366|ref|YP_003081203.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. TW14359]
 gi|261226727|ref|ZP_05941008.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256889|ref|ZP_05949422.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK966]
 gi|81764381|sp|Q8X510|RSMC_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712940|sp|B5Z4Q2|RSMC_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|12519394|gb|AAG59551.1|AE005668_6 putative enzyme [Escherichia coli O157:H7 str. EDL933]
 gi|13364807|dbj|BAB38752.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           O157:H7 str. Sakai]
 gi|187768028|gb|EDU31872.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014927|gb|EDU53049.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4113]
 gi|189000759|gb|EDU69745.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4076]
 gi|189364171|gb|EDU82590.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4486]
 gi|189375045|gb|EDU93461.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC869]
 gi|189379587|gb|EDU98003.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC508]
 gi|208726708|gb|EDZ76309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735762|gb|EDZ84449.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739400|gb|EDZ87082.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159557|gb|ACI36990.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4115]
 gi|209748990|gb|ACI72802.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748992|gb|ACI72803.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748996|gb|ACI72805.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|217322440|gb|EEC30864.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. TW14588]
 gi|254595766|gb|ACT75127.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. TW14359]
 gi|320190514|gb|EFW65164.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC1212]
 gi|320638709|gb|EFX08370.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. G5101]
 gi|326345317|gb|EGD69060.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. 1125]
 gi|326346829|gb|EGD70563.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. 1044]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|301022273|ref|ZP_07186171.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|299881323|gb|EFI89534.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|326382083|ref|ZP_08203776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326199509|gb|EGD56690.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 310

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 94/182 (51%), Gaps = 10/182 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   + +V G+   ++++  D    DR R  + +A+ R ++   +  I     F  
Sbjct: 28  AAAEAGELVAQVLGVEPGRLLLIDDVSDADRSR--IDDAVSRRVQRVPLQHITSRAHFAG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESP 120
           V LT+    F PRPETEL+V+ A+A  +  + +  +  +R++DL +G+GA+ +A+   +P
Sbjct: 86  VELTVGPGVFVPRPETELIVEWAVA-EIAELRRTGIAPIRVVDLCSGSGALAVAIAAHAP 144

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYI 175
             +   V+++  A E  + N    G++ R   +++D       S +     V+VSNPPY+
Sbjct: 145 DVQVTAVELAETASEYLRRNVHDLGLAGRVSVVRADVTDATAMSPILTGAHVVVSNPPYV 204

Query: 176 ES 177
            +
Sbjct: 205 PA 206


>gi|298735926|ref|YP_003728451.1| protoporphyrinogen oxidase [Helicobacter pylori B8]
 gi|298355115|emb|CBI65987.1| protoporphyrinogen oxidase [Helicobacter pylori B8]
          Length = 276

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 27/237 (11%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L  ++       + + L    I  +L   DFY     ++     PRPETE+LV  AL   
Sbjct: 48  LTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              I +  +  I ++G G+G V ++L  E+P       DIS  ALE+A  N     + ER
Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIHASDISPNALEVALKNIERFNLKER 163

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201
               ++  +  +  + +++VSNPPYI            R++        +P  +L GG+ 
Sbjct: 164 VFLKKTRLWDRMPTI-EMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVK 211

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G    + I    ++   K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 212 GDEILKEIIFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|255691883|ref|ZP_05415558.1| SmtA protein [Bacteroides finegoldii DSM 17565]
 gi|260622436|gb|EEX45307.1| SmtA protein [Bacteroides finegoldii DSM 17565]
          Length = 236

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 6/79 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           R+LD+GTGTG V L L + SP   K V +++   A+E AK N   +   E+ + +Q+D  
Sbjct: 40  RVLDVGTGTGLVALMLAQRSPADVKIVALEVDTAAVEQAKENVARSFWKEQIEVVQADFN 99

Query: 157 -WFSSVEGLFDVIVSNPPY 174
            + SS  G FDVIVSNPPY
Sbjct: 100 QYHSS--GKFDVIVSNPPY 116


>gi|320331548|gb|EFW87488.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330882032|gb|EGH16181.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|320321800|gb|EFW77898.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|293408055|ref|ZP_06651895.1| rsmC [Escherichia coli B354]
 gi|291472306|gb|EFF14788.1| rsmC [Escherichia coli B354]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|294658921|ref|XP_461263.2| DEHA2F21010p [Debaryomyces hansenii CBS767]
 gi|202953487|emb|CAG89652.2| DEHA2F21010p [Debaryomyces hansenii]
          Length = 311

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 36/289 (12%)

Query: 2   QALRDSHSF--LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           QALRDS     L R    +  Q  ++   + ++  +    +AI R  K E +  ILG + 
Sbjct: 11  QALRDSRLLPPLLRANP-NLEQAKLELKWIKNELPKSQWHDAIRRRSKLEPLQYILGSQP 69

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE 118
           F  + +    +   PR ETE  V    A       + D  ++ILD+ TG+G + L L  E
Sbjct: 70  FGALDILCRRNVLIPRWETEEWVMRISALVRKYHSQADGQLKILDVCTGSGCIPLLLNYE 129

Query: 119 SPFFKGV-----GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD------- 166
               + +     G DIS +A++++ +N       E + +   +   S E +FD       
Sbjct: 130 LSEVQNIPLKVHGCDISKEAVDLSMTN--LKKYEENYPSSSHNIEFSKEDIFDENLLQNI 187

Query: 167 -------VIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                  ++ SNPPYI        V+++ +   VR ++P I+L G  +    Y  +   V
Sbjct: 188 LLDKKLSLVTSNPPYIPIHDFNSPVLINGIEKSVRQYEPSIALVGENE---FYEALVRNV 244

Query: 214 SRHLNKDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLL 261
               N +G    E+GY ++V+ V  +   +  +     KD  GN R ++
Sbjct: 245 ILKSNPEGFV-FEVGYIEQVEFVANMLAQKSYWSCGMMKDSSGNVRCVV 292


>gi|71734702|ref|YP_277258.1| HemK family modification methylase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555255|gb|AAZ34466.1| modification methylase, HemK family [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|319790287|ref|YP_004151920.1| methyltransferase small [Thermovibrio ammonificans HB-1]
 gi|317114789|gb|ADU97279.1| methyltransferase small [Thermovibrio ammonificans HB-1]
          Length = 249

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ DLGTG G + + LL + P  + VG+D+  + +++A  NA  N V+ERF  +  +   
Sbjct: 44  RLADLGTGCGVIPILLLLKHPKVEAVGIDVLEENVKLALKNAELNKVAERFQAVTLNVTQ 103

Query: 160 SVEGL----FDVIVSNPPYIE 176
             E      FDV+VSNPP+IE
Sbjct: 104 VKEHFRPSSFDVVVSNPPFIE 124


>gi|289648530|ref|ZP_06479873.1| HemK family modification methylase [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|331650856|ref|ZP_08351884.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M718]
 gi|331051310|gb|EGI23359.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M718]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+                      DG    L   +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPF---------------------HDGMQTNLDAAQTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|257485641|ref|ZP_05639682.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011930|gb|EGH91986.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|229496584|ref|ZP_04390298.1| SmtA protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316481|gb|EEN82400.1| SmtA protein [Porphyromonas endodontalis ATCC 35406]
          Length = 256

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           +RILD+G GTG + L L +  P  +   ++I   A+E A  NA  +  S R   +Q+D+ 
Sbjct: 54  LRILDVGCGTGLIALMLAQRYPRAEVTALEIEPTAVERATYNAAQSPFSSRVRVVQADFS 113

Query: 158 -FSSVEGLFDVIVSNPPYIESVI 179
            + + + L+D+IVSNPPY ++ +
Sbjct: 114 TWQAPQALYDLIVSNPPYYKNTL 136


>gi|170681708|ref|YP_001746825.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           SMS-3-5]
 gi|226712950|sp|B1LEH4|RSMC_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|170519426|gb|ACB17604.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           SMS-3-5]
          Length = 343

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|330986980|gb|EGH85083.1| HemK family modification methylase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|317011269|gb|ADU85016.1| protoporphyrinogen oxidase [Helicobacter pylori SouthAfrica7]
          Length = 278

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 24/178 (13%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           +  RFF    + + L    I  +L    FY     ++     PRPETE+LV  AL     
Sbjct: 52  EEMRFF--ELVEKRLNDYPIEYLLESCSFYGRSFFVNEHVLIPRPETEILVQKALDI--- 106

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            I +  +  I ++G G+  V ++L  E+P       DIS  ALE+A  N       ERFD
Sbjct: 107 -ITQYHLKEIGEIGIGSACVSVSLALENPNLSIHASDISPNALEVASKNI------ERFD 159

Query: 152 TLQSDWFSSVEGLFD------VIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDG 202
            L+   F     L+D      +++SNPPYI ++  +D   L+    +P  +L GG+ G
Sbjct: 160 -LKKRIFLKQTHLWDHMPTTPMLISNPPYIAKNYPLDKSVLK----EPHKALFGGVKG 212


>gi|217032254|ref|ZP_03437751.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128]
 gi|216946020|gb|EEC24633.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128]
          Length = 276

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 27/237 (11%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L  ++       + + L    I  +L   DFY     ++     PRPETE+LV  AL   
Sbjct: 48  LTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRPETEILVQKALDI- 106

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              I +  +  I ++G G+G V ++L  E+P       DIS  ALE+A  N     + ER
Sbjct: 107 ---ISQYHLKEIGEIGIGSGCVSVSLALENPNLSIHASDISPNALEVALKNIERFNLKER 163

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--------DPRISLDGGID 201
               ++  +  +  + +++VSNPPYI            R++        +P  +L GG+ 
Sbjct: 164 CFLKKTRLWDRMPTI-EMLVSNPPYI-----------ARNYPLEKSVLKEPHEALFGGVK 211

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G    + I    ++   K      E+GY+Q   +    E    +    +KD  G DR
Sbjct: 212 GDEILKEIIFLAAKL--KIPFLVCEMGYDQLKSLKECLEFCG-YDAEFYKDLSGFDR 265


>gi|298489513|ref|ZP_07007523.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298155969|gb|EFH97079.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 314

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A++NA   G+ E      SD 
Sbjct: 135 ISRAVDIGCGTGAGALLIAVARPQAQVYAVDINPKALHFAQTNARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|218551620|ref|YP_002385412.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
           ATCC 35469]
 gi|226712954|sp|B7LNK6|RSMC_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218359162|emb|CAQ91825.1| 16S RNA m2G1207 methylase [Escherichia fergusonii ATCC 35469]
          Length = 343

 Score = 60.1 bits (144), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|325499880|gb|EGC97739.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
           ECD227]
          Length = 343

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|324112056|gb|EGC06034.1| methyltransferase small domain-containing protein [Escherichia
           fergusonii B253]
          Length = 343

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|312866013|ref|ZP_07726234.1| methyltransferase small domain protein [Streptococcus downei F0415]
 gi|311098417|gb|EFQ56640.1| methyltransferase small domain protein [Streptococcus downei F0415]
          Length = 196

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +ALE+A+ NA  NGV    DT QS+ +  
Sbjct: 61  LLDLGCGYGPLGISLAKVQNL-KVTMVDINQRALELAQKNAKRNGV--EVDTYQSNIYDQ 117

Query: 161 VEGLFDVIVSNPP 173
           V+G FD I+SNPP
Sbjct: 118 VKGQFDQIISNPP 130


>gi|331017756|gb|EGH97812.1| hypothetical protein PLA106_17069 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 319

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R     + R  D+G GTGA  L +    P  +   VDI+ KAL  A++NAV  G+     
Sbjct: 134 RSTSHPIKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-HNMQ 192

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIE 176
              SD  S + G FD+IV+NPPY++
Sbjct: 193 CCHSDILSGLTGNFDLIVANPPYMK 217


>gi|261885151|ref|ZP_06009190.1| bifunctional methyltransferase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 261

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 21/204 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--- 115
           DF +           PR ETE+LV    + +       D + I ++G G+G + ++L   
Sbjct: 69  DFLDYEFEGRRGVLVPRYETEILVHRVASIAT----HLDNISICEIGIGSGVISISLAQM 124

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           LK   F      DIS  A+  A+++    GV  + +   + +   VEG FD+IVSNPPYI
Sbjct: 125 LKNCIF---TAADISEDAIRYARNHISRFGV--QIELFNTSFLDGVEGDFDIIVSNPPYI 179

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            +   +D   +     +P  +L GG  G    + I + +++   K  +C  E+GY+QK  
Sbjct: 180 AKDYKLDKWVMS----EPSQALFGGEKGDEILKKIVN-LAKDRTKFLVC--EMGYDQKAS 232

Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258
           +    E +  F    +KD  G DR
Sbjct: 233 LSNELE-KAGFKFEFYKDLAGFDR 255


>gi|254561604|ref|YP_003068699.1| hypothetical protein METDI3191 [Methylobacterium extorquens DM4]
 gi|254268882|emb|CAX24843.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 341

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ D+G G+GA  + + K  P  + V VDI+  AL  A+ NA   GV +    + SD  S
Sbjct: 161 RVADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGV-DNVRPVHSDMLS 219

Query: 160 SVEGLFDVIVSNPPYI 175
           SVEG FD+IVSNPP++
Sbjct: 220 SVEGSFDLIVSNPPFM 235


>gi|194439306|ref|ZP_03071385.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           101-1]
 gi|194421788|gb|EDX37796.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           101-1]
 gi|323969515|gb|EGB64807.1| methyltransferase small domain-containing protein [Escherichia coli
           TA007]
          Length = 343

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFSRHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|255280358|ref|ZP_05344913.1| putative N-6 adenine-specific DNA methylase [Bryantella
           formatexigens DSM 14469]
 gi|255268823|gb|EET62028.1| putative N-6 adenine-specific DNA methylase [Bryantella
           formatexigens DSM 14469]
          Length = 245

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+ +R+  R+LDLGTGTG + + L  ++P     G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLSGFVRVRERE--RVLDLGTGTGIIPILLEAKTPGEHFTGLEIQKRSADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             NG+S+R   ++ D   +V       FDV+ SNPPY+
Sbjct: 90  ELNGLSDRISIVEGDIKEAVSIFGRASFDVVTSNPPYM 127


>gi|160884585|ref|ZP_02065588.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483]
 gi|156110324|gb|EDO12069.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483]
          Length = 236

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P    V ++I   A+  A+ N + +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAVGQARENVIRSPWKERVEVVQADFR 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     VD L       D + +     + LS Y  + +GVS  
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRTAARHNNSLS-YEDLLEGVSGL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261
           L ++G  +V I  +    V +I   +KL+ V   N     GG   RVL+
Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|283788394|ref|YP_003368259.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
           rodentium ICC168]
 gi|282951848|emb|CBG91558.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
           rodentium ICC168]
          Length = 342

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +AL   SP  +    D+S  A+E +++    NG+    D   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVALASHSPKVRLTLCDVSAPAVEASRATLAANGIEG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+ +       GL+        S D         +T+  G  RHLN 
Sbjct: 257 EVTGRFDMIISNPPFHD-------GLQT-------SFDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|57242017|ref|ZP_00369957.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis
           RM3195]
 gi|57017209|gb|EAL53990.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis
           RM3195]
          Length = 265

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 22/258 (8%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSS 69
           LC         + ++ +   D+R+ F     ++R  K  E    +    DFY +   +  
Sbjct: 25  LCEFLQKDRTWLFLNENLEFDEREYF----ELIRRFKEGEPYEYLFKKADFYGLEFYIEK 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ++E+L++  L  +     K  +   L++G G+G + + L K     K    DI
Sbjct: 81  GVLIPRYDSEILLEKLLELT----HKEKLQNALEIGFGSGILSIILAKNLGL-KIKACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLE 186
           + KAL+IA  NA  + V    D + SD F  +E   G FD+I SNPPYI++     L   
Sbjct: 136 NEKALKIALKNAKKHEVL--IDFVLSD-FEKLELRKGEFDLIFSNPPYIKNSY--PLDKW 190

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V++ +P+ +L GG  G      I   +  +  +    + E GY+QK  + +I ++   F 
Sbjct: 191 VQN-EPKNALLGGEKGYEILEKII--IFAYQKEAKFLACEFGYDQKEILSQILDTYN-FK 246

Query: 247 VNAFKDYGGNDRVLLFCR 264
              FKD  G DR  +  R
Sbjct: 247 AEFFKDENGFDRAFVAKR 264


>gi|170751295|ref|YP_001757555.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
 gi|170657817|gb|ACB26872.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
          Length = 324

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R V R +D+G G+GA  + + K +P  + V VDI+  A+  A+ NA   G ++  D  +
Sbjct: 139 SRPVRRAVDIGCGSGAAGICVAKRAPGAEVVLVDINPAAMRAARVNARLAG-TDGVDVRR 197

Query: 155 SDWFSSVEGLFDVIVSNPPYI 175
           SD    VEG FD+IVSNPP++
Sbjct: 198 SDMLRDVEGQFDLIVSNPPFM 218


>gi|151567849|pdb|2PJD|A Chain A, Crystal Structure Of 16s Rrna Methyltransferase Rsmc
          Length = 343

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDXIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|257056938|ref|YP_003134770.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Saccharomonospora viridis DSM 43017]
 gi|256586810|gb|ACU97943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Saccharomonospora viridis DSM 43017]
          Length = 287

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 14/195 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PRPETELL++  L         R+   ++DL TG+GA+ LA+ +  P      VD   
Sbjct: 92  FIPRPETELLLEWGLKLLK----GREHPVVVDLCTGSGALALAVAEARPDAVVYAVDNDP 147

Query: 132 KALEIAKSN----AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            AL  A+ N    A       R    D      F+ ++GL D+++ NPPY+       + 
Sbjct: 148 SALAWARHNADLRAEAGDTPIRLYSGDVTDDTVFAELDGLVDLVLCNPPYVPEGT--PVP 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV D+DP  ++    DGL   R +    +R L   G  ++E        V  + E R++
Sbjct: 206 PEVADYDPPHAVFAPEDGLGIIRHVVTMAARLLRPGGGVAIEHDETHAHSVPPLLEVRRV 265

Query: 245 FL-VNAFKDYGGNDR 258
              V   KD  G  R
Sbjct: 266 LTDVTTHKDLAGRPR 280


>gi|295098508|emb|CBK87598.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 342

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG+    D   S+ FS
Sbjct: 199 KVLDVGCGAGVLSTVLASHSPKVRLTLCDVSAPAVEASRATLAANGIEG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+                      DG    L   +T+  G +RHLN 
Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGMETSLEAAQTLIRGATRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|213968468|ref|ZP_03396611.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301386087|ref|ZP_07234505.1| hypothetical protein PsyrptM_25774 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060245|ref|ZP_07251786.1| hypothetical protein PsyrptK_09647 [Pseudomonas syringae pv. tomato
           K40]
 gi|302131987|ref|ZP_07257977.1| hypothetical protein PsyrptN_11384 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926756|gb|EEB60308.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 319

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R  D+G GTGA  L +    P  +   VDI+ KAL  A++NAV  G+        SD 
Sbjct: 140 IKRAADIGCGTGAGALLIAVARPDAQVYAVDINPKALHFAQANAVVAGL-HNMQCCHSDI 198

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 199 LSGLTGNFDLIVANPPYMK 217


>gi|150402974|ref|YP_001330268.1| putative methylase [Methanococcus maripaludis C7]
 gi|150034004|gb|ABR66117.1| putative methylase [Methanococcus maripaludis C7]
          Length = 202

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++      + P  ++ELL+++     L  ++ + V   LD+GTG+G   +  +K+    
Sbjct: 10  IKIKTHPKVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKQGAV- 60

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           K +G+DI+  A++ AK N+  N ++ E+     SD F +++  FDVI+ N PY+ +   +
Sbjct: 61  KVIGIDINPYAVDCAKINSELNEINPEKLSFKTSDLFKNIDEKFDVILFNAPYLPTSDEE 120

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L   +       + DGG DG        D V+ +LN++G   +
Sbjct: 121 KLEKYL-----NYAFDGGTDGREVLDKFLDEVTNYLNENGTVQI 159


>gi|329770374|ref|ZP_08261756.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
 gi|328836497|gb|EGF86157.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
          Length = 198

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 50/79 (63%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +++   + D+G G G + + L K++P +    +D++ ++LE++K N   N +  + + ++
Sbjct: 55  EKEYADVADVGCGYGVISIFLAKKNPNYNFTMIDVNNRSLELSKKNIELNKIDNKIEIIE 114

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           S  F +V+G FD++++NPP
Sbjct: 115 SSSFDNVKGTFDIVLTNPP 133


>gi|150401181|ref|YP_001324947.1| putative methylase [Methanococcus aeolicus Nankai-3]
 gi|150013884|gb|ABR56335.1| putative methylase [Methanococcus aeolicus Nankai-3]
          Length = 208

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 17/157 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  ++ELL+++     L  ++ + V   LD+GTGTG   +   K+    K +G+DI+ 
Sbjct: 21  YEPAEDSELLINN-----LTEVKNKSV---LDVGTGTGIQAINAKKQGAK-KVIGIDINP 71

Query: 132 KALEIAKSNAVTNGV-SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVR 188
            A+E A  N   N + + +   ++SD F+S+  E  FDVI+ N PY+ +   + L   + 
Sbjct: 72  YAIETAIENIKLNKLDANKISFIESDLFNSIKTEYKFDVILFNAPYLPTTEEEKLEKYLN 131

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 + DGGIDG          VS +L ++G+  +
Sbjct: 132 -----YAFDGGIDGRKVLDRFIKEVSNYLKENGVIQI 163


>gi|284046461|ref|YP_003396801.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283950682|gb|ADB53426.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 376

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL TG+G   LA L ++   + V V++      +A+ N + NG+ ER D    D + 
Sbjct: 164 RVLDLCTGSG--LLATLPDA--AQVVAVELDPVTASVARFNVLLNGLGERIDVRDGDLYE 219

Query: 160 SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            V G   FD+IV+NPP + S      G+ V      ++ DGG DG +  R +  GV RHL
Sbjct: 220 PVAGEQPFDLIVANPPIVPS----PEGISV-----PLAGDGGPDGDAALRRVLAGVERHL 270

Query: 218 NKDG 221
              G
Sbjct: 271 APGG 274


>gi|239787480|emb|CAX83951.1| Modification methylase, HemK family [uncultured bacterium]
          Length = 321

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 5/202 (2%)

Query: 30  LDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L  RQR  L   I +R+ +   +  ++G   F      +      PR   E ++D +   
Sbjct: 70  LTGRQRRRLAWLIALRTRRRLPLPYLVGEAFFAGRSFHVDRRVLIPRSLIENILDDSEGL 129

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-S 147
           +L  ++   + RILDLGTG+G + + L    P  +  G DI  +AL +A  N     +  
Sbjct: 130 AL-WMDPERLGRILDLGTGSGCLAITLALAYPGARVDGSDICPRALAVADINRRRFRLGG 188

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++    +D+IV+NPPY+       L  E R  +P  +L  G  GL+  
Sbjct: 189 DRLRLIRSDLFQNLPRECYDLIVANPPYVAPGEYASLPREYR-HEPGRALRAGEGGLALV 247

Query: 207 RTIADGVSRHLNKDGLCSVEIG 228
             I    + HL   G    E+G
Sbjct: 248 AAILRQAADHLAPGGWLICEVG 269


>gi|66048324|ref|YP_238165.1| hypothetical protein Psyr_5100 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63259031|gb|AAY40127.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970293|gb|EGH70359.1| hypothetical protein PSYAR_07359 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 315

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R +D+G GTGA  + +    P  +   VDI+ KAL  A++NA   G+ +  +   SD 
Sbjct: 135 VNRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLSGNFDLIVANPPYMK 212


>gi|297519416|ref|ZP_06937802.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli OP50]
          Length = 144

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 23/121 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS 
Sbjct: 1   MLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSE 58

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN  
Sbjct: 59  VKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNSG 97

Query: 221 G 221
           G
Sbjct: 98  G 98


>gi|168464529|ref|ZP_02698432.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|195632765|gb|EDX51219.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|194444545|ref|YP_002043797.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|226712976|sp|B4T4F9|RSMC_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194403208|gb|ACF63430.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNIFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|731536|sp|P39200|YFCB_VIBAN RecName: Full=Uncharacterized adenine-specific methylase yfcB
          Length = 148

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 2/102 (1%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL++A+ N   +G+ ++   ++SD F  + +  +D+IVSNPPY++   ++ L  E
Sbjct: 1   DISTDALQVAEQNIQDHGMEQQVFPIRSDLFRDLPKEKYDLIVSNPPYVDQEDMNSLPKE 60

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +  +P + L  G DGL   R I    + +L  +G+   E+G
Sbjct: 61  FK-HEPELGLAAGTDGLKLVRRILANAAGYLTDNGILICEVG 101


>gi|134046649|ref|YP_001098134.1| putative methylase [Methanococcus maripaludis C5]
 gi|132664274|gb|ABO35920.1| putative methylase [Methanococcus maripaludis C5]
          Length = 202

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 84/164 (51%), Gaps = 15/164 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++    + + P  ++ELL+++     L  ++ + V   LD+GTG+G   +  +K+    
Sbjct: 10  IKIKTHPNVYVPAEDSELLIEN-----LVDVKNKSV---LDVGTGSGIQAINAVKKGAS- 60

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           K +G+DI+  A+E AK+N+ +N + S++      D F +++  FDVI+ N PY+ +   +
Sbjct: 61  KVIGIDINPYAVECAKTNSKSNEINSKKLSFKTGDLFKNIDEKFDVILFNAPYLPTSDEE 120

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L   +       + DGG +G        D V  HLN+ G   +
Sbjct: 121 KLEKYL-----NYAFDGGKNGREVLDKFLDEVINHLNEKGTVQI 159


>gi|205355276|ref|YP_002229077.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|226712974|sp|B5R9T9|RSMC_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|205275057|emb|CAR40145.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326630441|gb|EGE36784.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|260593449|ref|ZP_05858907.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis
           F0319]
 gi|260534565|gb|EEX17182.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis
           F0319]
          Length = 287

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 10/192 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL---VDSALAFSLPRIE 94
           L   + R    E +  +LG   F      ++     PRPETE+L   +++        ++
Sbjct: 54  LDKIMQRLASSEPVQYVLGMETFCGRSFKVAPGVLIPRPETEVLCHWIEADNNHPYCALQ 113

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGVSERFDT 152
               +++LD+GTG+G + + L  +         DIS  AL IA+ N     + V  + + 
Sbjct: 114 PPVPLQVLDVGTGSGCIAVTLALDLYNSAVTAWDISADALLIARDNVHRWDSSVVLQMED 173

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTI 209
           + S   ++ E  +D+IVSNPPYI       +   V  ++P  +L   D   D +  YR I
Sbjct: 174 ILSISATAKEQKWDIIVSNPPYICDKERSSMAENVLKYEPETALFVPDN--DPIKFYRAI 231

Query: 210 ADGVSRHLNKDG 221
           A+     L  DG
Sbjct: 232 AEYGVTALTDDG 243


>gi|260174909|ref|ZP_05761321.1| putative RNA methyltransferase [Bacteroides sp. D2]
 gi|315923152|ref|ZP_07919392.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697027|gb|EFS33862.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 236

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 85/169 (50%), Gaps = 17/169 (10%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWRERVEVVQADFK 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     VD L       D + +     D L+ Y  + +GVS  
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YDDLLEGVSGL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261
           L ++G  +V I  +    V +I   +KL+ V   N     GG   RVL+
Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|330945099|gb|EGH46833.1| hypothetical protein PSYPI_32873 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 220

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  + +    P  +   VDI+ KAL  A++NA   G+ +  +   SD 
Sbjct: 135 INRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLSGNFDLIVANPPYMK 212


>gi|168244550|ref|ZP_02669482.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|194448966|ref|YP_002048576.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|226712975|sp|B4TGY8|RSMC_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194407270|gb|ACF67489.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|205336629|gb|EDZ23393.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|161617866|ref|YP_001591830.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|226712977|sp|A9N7C4|RSMC_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|161367230|gb|ABX70998.1| hypothetical protein SPAB_05733 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|311268958|ref|XP_003132283.1| PREDICTED: hemK methyltransferase family member 1-like [Sus scrofa]
          Length = 264

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 13/210 (6%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGT 106
            +  I G  DF+ + L +       RPETE LV+  L     R   +       IL++G 
Sbjct: 2   PVQYIPGEWDFHGLSLKMVPPAIILRPETEELVEWVLEEVTQRPHAVGAHGGPLILEVGC 61

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD------TLQSDWFSS 160
           G+GA+ L+LL + P  + + VD    A+ +   NA    + +R        TL+ +W   
Sbjct: 62  GSGAISLSLLSKLPESQVIAVDKGEAAICLTHENAQRLQLQDRIRIIPLDVTLEQNWAHL 121

Query: 161 VE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADGVSRH 216
           +  G  D+++SNPPY+    ++ L  E+  ++   +LDGG +G+   +H   +A  + + 
Sbjct: 122 LPWGPVDLVISNPPYVFHRDMEQLAPEILSYEDPTALDGGEEGMDIITHILALAPRLLKD 181

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              D L  + I +  ++  + +  S  L L
Sbjct: 182 SGSDPLFLMPIPHQLRIFPLPLASSMSLQL 211


>gi|204927148|ref|ZP_03218350.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204323813|gb|EDZ09008.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|299145710|ref|ZP_07038778.1| SmtA protein [Bacteroides sp. 3_1_23]
 gi|298516201|gb|EFI40082.1| SmtA protein [Bacteroides sp. 3_1_23]
          Length = 236

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P    V ++I   A+  A+ N + +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDTNIVALEIDEAAVGQARENVIRSPWKERVEVVQADFR 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     +D L       D + +     D L+ Y  + +GVS  
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FIDSLECP----DRQRAAARHNDSLT-YDDLLEGVSGL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG-NDRVLL 261
           L ++G  +V I  +    V +I   +KL+ V   N     GG   RVL+
Sbjct: 150 LTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|321222476|gb|EFX47548.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|167552222|ref|ZP_02345975.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205323159|gb|EDZ10998.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|16767797|ref|NP_463412.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|197263702|ref|ZP_03163776.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242075|ref|YP_002218430.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|207859682|ref|YP_002246333.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|81853618|sp|Q8ZJW6|RSMC_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712972|sp|B5FTB3|RSMC_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712973|sp|B5R2I6|RSMC_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|16423121|gb|AAL23371.1| 16S ribosomal rRNA [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|197241957|gb|EDY24577.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936591|gb|ACH73924.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|206711485|emb|CAR35870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261249638|emb|CBG27508.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996916|gb|ACY91801.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301161036|emb|CBW20573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312915650|dbj|BAJ39624.1| 16S rRNA methyltransferase C [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323132895|gb|ADX20325.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326626237|gb|EGE32582.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|332991362|gb|AEF10345.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|16763351|ref|NP_458968.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29144829|ref|NP_808171.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|213051998|ref|ZP_03344876.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213419349|ref|ZP_03352415.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213427560|ref|ZP_03360310.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213650120|ref|ZP_03380173.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|289828938|ref|ZP_06546656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|81853154|sp|Q8Z0V2|RSMC_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|25513266|pir||AH1071 conserved hypothetical protein STY4906 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505660|emb|CAD03391.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29140468|gb|AAO72031.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|200387205|ref|ZP_03213817.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199604303|gb|EDZ02848.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|168262394|ref|ZP_02684367.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205348826|gb|EDZ35457.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|56416330|ref|YP_153405.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197365253|ref|YP_002144890.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|81821528|sp|Q5PK16|RSMC_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712978|sp|B5BL07|RSMC_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|56130587|gb|AAV80093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096730|emb|CAR62353.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 342

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|330976371|gb|EGH76428.1| hypothetical protein PSYAP_06959 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 315

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+G GTGA  + +    P  +   VDI+ KAL  A++NA   G+ +  +   SD  S
Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNATVAGL-KNMECCHSDILS 195

Query: 160 SVEGLFDVIVSNPPYIE 176
            + G FD+IV+NPPY++
Sbjct: 196 GLSGSFDLIVANPPYMK 212


>gi|168822095|ref|ZP_02834095.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205341377|gb|EDZ28141.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
          Length = 342

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|238910715|ref|ZP_04654552.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|322615721|gb|EFY12641.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620569|gb|EFY17429.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322621804|gb|EFY18654.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627529|gb|EFY24320.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322630836|gb|EFY27600.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637946|gb|EFY34647.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642216|gb|EFY38824.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644937|gb|EFY41469.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651101|gb|EFY47486.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656643|gb|EFY52931.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658699|gb|EFY54956.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322661859|gb|EFY58075.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666395|gb|EFY62573.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672449|gb|EFY68561.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676243|gb|EFY72314.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322679668|gb|EFY75713.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684378|gb|EFY80382.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323191860|gb|EFZ77109.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196669|gb|EFZ81816.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323200938|gb|EFZ86007.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323209335|gb|EFZ94268.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323212978|gb|EFZ97780.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323216721|gb|EGA01446.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223319|gb|EGA07656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323226154|gb|EGA10371.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323228807|gb|EGA12936.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236582|gb|EGA20658.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239918|gb|EGA23965.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242035|gb|EGA26064.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323247524|gb|EGA31479.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323250626|gb|EGA34508.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323259355|gb|EGA42997.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323263767|gb|EGA47288.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265639|gb|EGA49135.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323270084|gb|EGA53532.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 342

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|168230199|ref|ZP_02655257.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168234688|ref|ZP_02659746.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194471541|ref|ZP_03077525.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194736271|ref|YP_002117470.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251566|ref|YP_002149497.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|226712970|sp|B5F512|RSMC_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712979|sp|B4TU29|RSMC_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194457905|gb|EDX46744.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194711773|gb|ACF90994.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197215269|gb|ACH52666.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197291795|gb|EDY31145.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|205335077|gb|EDZ21841.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 342

 Score = 58.9 bits (141), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|295084254|emb|CBK65777.1| Predicted O-methyltransferase [Bacteroides xylanisolvens XB1A]
          Length = 236

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 74/161 (45%), Gaps = 14/161 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERIEVVQADFK 99

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  FDVIVSNPPY     VD   LE  D   R       +    Y  + +GV+R L
Sbjct: 100 KHRSSDKFDVIVSNPPY----FVD--SLECPD---RQRTAARHNNSLTYEELLEGVNRLL 150

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255
             DGL +  I  +    V  I    KL+ +   N     GG
Sbjct: 151 AADGLFTAVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191


>gi|262274926|ref|ZP_06052737.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886]
 gi|262221489|gb|EEY72803.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886]
          Length = 269

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E +D   ILD+GTGTG + L + +  P  +   +DI   A E A+ NA  +   +R D  
Sbjct: 68  EAKDGHTILDIGTGTGLLALMMAQRFPTARITALDIDAHAAETARFNAEQSAWHDRIDVH 127

Query: 154 QSD---WFSSVEGLFDVIVSNPPYIES 177
             D   W SS +  FD IV NPPY  +
Sbjct: 128 HQDICTWESSAQ--FDTIVCNPPYFTT 152


>gi|289677510|ref|ZP_06498400.1| hypothetical protein PsyrpsF_29771 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 315

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+G GTGA  + +    P  +   VDI+ KAL  A++NA   G+ +  +   SD  S
Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNATVAGL-KNMECCHSDILS 195

Query: 160 SVEGLFDVIVSNPPYIE 176
            + G FD+IV+NPPY++
Sbjct: 196 GLSGNFDLIVANPPYMK 212


>gi|288960113|ref|YP_003450453.1| methyltransferase [Azospirillum sp. B510]
 gi|288912421|dbj|BAI73909.1| methyltransferase [Azospirillum sp. B510]
          Length = 256

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTGA  L L    P    VG++    A   A+ NA   GV+ER   ++ D  +
Sbjct: 54  RVLDVGTGTGAAALCLAVRVPGVAVVGLEQRADACAFARRNAALTGVAERVTVVEGDLLA 113

Query: 160 SVE----GLFDVIVSNPPYIES 177
             E    G FD ++ NPPY+ +
Sbjct: 114 PPETVGGGGFDRVMMNPPYLRA 135


>gi|320088989|emb|CBY98745.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 342

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|302185806|ref|ZP_07262479.1| hypothetical protein Psyrps6_05655 [Pseudomonas syringae pv.
           syringae 642]
          Length = 315

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+G GTGA  + +    P  +   VDI+ KAL  A++NA   G+ +  +   SD  S
Sbjct: 137 RAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAVAGL-KNMECCHSDILS 195

Query: 160 SVEGLFDVIVSNPPYIE 176
            + G FD+IV+NPPY++
Sbjct: 196 GLSGNFDLIVANPPYMK 212


>gi|37527438|ref|NP_930782.1| hypothetical protein plu3566 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786873|emb|CAE15939.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 283

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 12/214 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           DR R     A+        +  I+G  DF  + LT+ +  F PRP ++++      +   
Sbjct: 44  DRARDEFMLAVHERCNRIPLGHIVGTVDFDGLPLTVGTGVFIPRPHSQVI----HKWLEN 99

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERF 150
             +      +LDL +G+GA+ LA+ K  P  K   V+    A +    N       + + 
Sbjct: 100 EYQAPHGAVVLDLCSGSGAIGLAIAKRRPDLKVTCVEYDDVAFQYLTRNIYRLANWAIKA 159

Query: 151 DTLQS---DW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           D L++   DW  FS   G   +IV+NPPY+       +  E  +  P  S+  G DGL  
Sbjct: 160 DALKADLRDWQAFSQFNGSVALIVANPPYVPE--QQEILPEWEEHHPYASVYSGDDGLDL 217

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            R I     + L  +G   +E G +Q   V  +F
Sbjct: 218 ARLIIKQAKQLLQSEGWLVIEHGESQGESVRALF 251


>gi|171779487|ref|ZP_02920451.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282104|gb|EDT47535.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 197

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +A+++AK NA  NGV    D  QSD +  
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-KPTMVDINNRAIDLAKQNAQKNGVEA--DIFQSDIYEK 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VNGTFDYIISNPP 130


>gi|229085996|ref|ZP_04218218.1| Modification methylase, HemK [Bacillus cereus Rock3-44]
 gi|228697307|gb|EEL50070.1| Modification methylase, HemK [Bacillus cereus Rock3-44]
          Length = 260

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F ++R+ +    F PR  TE LV  A   S       D+V  +DL  G+GA
Sbjct: 51  LEYVVGYAEFCSLRIEVDRGVFVPRQRTEFLVHQAETLSC----SGDIV--VDLCCGSGA 104

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V +AL       +   VDI   A+  A  N    G       L      S+ G  +++V+
Sbjct: 105 VGVALAAALGRVELYSVDIDPVAVRCAGRNVTDFGGHVFEGDLYKALPRSLRGHVNILVA 164

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           N PY+ +  +  L  E R  +P+++LDGG DGL   R +A      L   G   +E    
Sbjct: 165 NVPYVPTKAIKLLPQEARLHEPKVALDGGEDGLDIQRRVAAEAFLWLAPGGHLLIETSEM 224

Query: 231 QKVDVVRIFESRKL 244
           Q      IF    L
Sbjct: 225 QAPQTFEIFSGAGL 238


>gi|157377110|ref|YP_001475710.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|226713000|sp|A8G0F9|RSMC_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157319484|gb|ABV38582.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 343

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P  K   VDI+  A+E  K     N  +   DT  SD  +
Sbjct: 204 RVLDFGCGAGVITAALLKAQPELKVECVDINAMAIESCKLTLAANNFTA--DTYPSDGLT 261

Query: 160 SVEGLFDVIVSNPPY 174
             +GLF+ I+SNPP+
Sbjct: 262 QTKGLFNGIISNPPF 276


>gi|62182975|ref|YP_219392.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|81309498|sp|Q57G51|RSMC_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|62130608|gb|AAX68311.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322717481|gb|EFZ09052.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 342

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|153806353|ref|ZP_01959021.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185]
 gi|149131030|gb|EDM22236.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185]
          Length = 236

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 80/161 (49%), Gaps = 16/161 (9%)

Query: 101 ILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           ILD+GTGTG V L L + S P    V ++I   A E AK N V +   ++ + +Q+D+  
Sbjct: 41  ILDVGTGTGLVALMLAQRSLPNTNIVALEIDEAAAEQAKENIVRSPWKKQIEVVQTDFRK 100

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + S E  FDVIVSNPPY     VD LG      D + +     D L+ Y  + +GV+  L
Sbjct: 101 YQSPEK-FDVIVSNPPY----FVDSLGCP----DQQRNSARHNDSLT-YEELLEGVTGLL 150

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255
            ++G  ++ I  +    V  I   +KL  V   N     GG
Sbjct: 151 TENGTFTIVIPMDVADRVKMIASEKKLQAVRQLNVITKPGG 191


>gi|118096741|ref|XP_414261.2| PREDICTED: similar to HEMK homolog [Gallus gallus]
          Length = 352

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 29/240 (12%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------DSALAFS 89
           + L+   +  +LG  DF N+ L +    F PRPETE L+              +SA + +
Sbjct: 112 KRLERMPVQYVLGEWDFQNLTLKMRPPVFIPRPETEDLISLVVEEESRKCEVKNSAFSVA 171

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +P         IL++G G+GA+ L+LL + P  + + VD    A+++ + N     +  R
Sbjct: 172 VPP------PVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQGR 225

Query: 150 FDTLQSD-WFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              L  +  + S +     G  D IVSNPPY+    +  L  E+  ++   +LDGG DG+
Sbjct: 226 IHVLHHNVSYGSAKHLLPWGPMDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGM 285

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLV--NAFKDYGGNDRVL 260
              +TI       L   G   +E+       V     ++  LFL      KD+ G  R L
Sbjct: 286 RVIKTILTLAPTLLKDSGSVFLEVDPRHPAMVEDWLTAQPDLFLTLRAVHKDFCGKPRFL 345


>gi|224586377|ref|YP_002640176.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|224470905|gb|ACN48735.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 342

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|116619370|ref|YP_821526.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
 gi|116222532|gb|ABJ81241.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
          Length = 488

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 16/141 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++ +AF L  + +     +LDLGTG+G   L   K +      G DI+ +++  A+ N 
Sbjct: 129 IENTVAF-LATLPETPCTALLDLGTGSGIAALDGAKYAS--HTWGTDIAARSVHFAEFNR 185

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             NG+ +    LQ D ++ VEGL FD IV++PPY+ +             +  I  DGG 
Sbjct: 186 RLNGI-QNATMLQGDLYAPVEGLTFDRIVAHPPYVPA-----------RQNAMIFRDGGE 233

Query: 201 DGLSHYRTIADGVSRHLNKDG 221
           DG    R I +G+ R L   G
Sbjct: 234 DGEQILRGIVEGLPRFLRPGG 254


>gi|295395537|ref|ZP_06805731.1| methylase of polypeptide chain release factors [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971556|gb|EFG47437.1| methylase of polypeptide chain release factors [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 534

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 15/151 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG G   +AL +       +  DIS +AL   ++NA  NG +   +T +
Sbjct: 169 RTPVHTALDLGTGCGIQAIALARHCDHV--IATDISARALAFTRANATLNG-AHNIETRE 225

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
              F      FD+IVSNPP++ +       LE R        DGG  G    RT+   + 
Sbjct: 226 GSLFEPTPEQFDLIVSNPPFVITPQGHTATLEYR--------DGGHTGDQLMRTLLAQLP 277

Query: 215 RHLNKDG----LCSVEIGYNQKVDVVRIFES 241
            HL   G    L + EI +    D  +  E+
Sbjct: 278 NHLTTSGTACLLGNWEITHATSEDPTQDPET 308


>gi|291276431|ref|YP_003516203.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter mustelae 12198]
 gi|290963625|emb|CBG39457.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter mustelae 12198]
          Length = 281

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 18/215 (8%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I     FY     +      PRPETELL+D A+ F L   ++  V  I ++G G+G 
Sbjct: 70  IEYITKEASFYEHIFYVDHRVLIPRPETELLID-AVDFLL---QEHGVKNIAEVGVGSGI 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAV-----TNGVSERFDTLQSDWFSSVEG-L 164
           + + L  +      +  DIS  AL++A  N        N +  +   + ++    V+   
Sbjct: 126 ISITLALKYKDISLIATDISKDALDVATCNIAHFHTQENNLKNKIKLVHTNLLDGVKKDS 185

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            D++++NPPY    I     LE     +P  +L GG  G      + +  S   NK    
Sbjct: 186 LDLLIANPPY----IARSYPLEPHVLLEPHCALFGGERGDEILLELIEVAST--NKIKFL 239

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           + E+G++QK  +    + +  +  + ++DY G DR
Sbjct: 240 ACEMGFDQKESLQEALK-KAGYRADFYQDYAGLDR 273


>gi|213029544|ref|ZP_03343991.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 229

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 86  KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 143

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 144 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 182

Query: 220 DG 221
            G
Sbjct: 183 GG 184


>gi|188581630|ref|YP_001925075.1| methyltransferase small [Methylobacterium populi BJ001]
 gi|179345128|gb|ACB80540.1| methyltransferase small [Methylobacterium populi BJ001]
          Length = 341

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D+    P+T    ++ LA    R  K      R++D+G G+GA  + + K  P  + 
Sbjct: 126 LAADSVFFGPDTMRFAEAVLAHLEERARKGRPAPRRVVDIGCGSGATGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA   GV      + SD    VEG FD+IVSNPP+    +VD  G
Sbjct: 186 VLVDINPAALRAARINARLAGVPN-VHPVHSDMLQGVEGAFDLIVSNPPF----MVDAGG 240

Query: 185 LEVRD 189
              R+
Sbjct: 241 RAYRN 245


>gi|319948467|ref|ZP_08022603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dietzia cinnamea P4]
 gi|319437887|gb|EFV92871.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dietzia cinnamea P4]
          Length = 322

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG      + L +    F PRPETELLV+  LA +LP         ++DL  G+G + L
Sbjct: 77  LLGRAASGRLDLAVGPGVFIPRPETELLVEWTLA-ALPAPTPEPGPVVVDLCAGSGTIAL 135

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFD 166
            +    P  +   V++   ALE  + NA     +        R D    +  + + G   
Sbjct: 136 EIAHARPDARVHAVELHDAALEWLRRNAHERAAAGDTPVEVHRADATDIETLAHLRGRVA 195

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            +VSNPPYI   + D L  EV   +P  +L
Sbjct: 196 AVVSNPPYIP--VTDDLPAEVLAHEPATAL 223


>gi|256810548|ref|YP_003127917.1| methylase [Methanocaldococcus fervens AG86]
 gi|256793748|gb|ACV24417.1| methylase [Methanocaldococcus fervens AG86]
          Length = 199

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 15/164 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L L  + +EP  ++ LL+ +     L  ++ ++V   L++G GTG + +A  K+    
Sbjct: 8   IKLKLHPEVYEPAEDSILLLKN-----LVDVKGKEV---LEIGVGTGLISIACAKKGAK- 58

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           K VGVDI+  A+++A+ NA  N ++      ++SD F +V G FDVI+ NPPY+ +   D
Sbjct: 59  KVVGVDINPYAVKLAEENAKLNNLNNADISFIRSDLFENVSGTFDVILFNPPYLPTSEDD 118

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     D     + DGG DG        D +  +L K G+  +
Sbjct: 119 LI-----DSYINYAFDGGKDGREILDRFIDNLPNYLKKGGVVQI 157


>gi|149239086|ref|XP_001525419.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450912|gb|EDK45168.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 308

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 32/249 (12%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI R  +   +  IL  + F  + +        PR ETE    + LA  L +   R  ++
Sbjct: 51  AINRRARLVPLQYILKSQPFGGLSIACREGVLVPRWETEEWC-TRLAELLEKNNAR-TLK 108

Query: 101 ILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+D  TGTG + L L  +  +F    + +G D+S +ALE+AK N  T   +    + Q+ 
Sbjct: 109 IVDACTGTGCIPLLLNHQIKYFADKFEAIGFDVSIEALELAKKNLKTYISNHDMSSTQTK 168

Query: 157 W---------------FSSVEGLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRIS 195
                           FS + G  D++ +NPPYI      +S   + +   VR ++PR++
Sbjct: 169 ISFQSANVFDPNLCKNFSEI-GDIDIVTANPPYIPAEDYLKSTQRNGVERSVRLYEPRLA 227

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L G ++    Y  + + V   L+  G    E+GY  +   VR      L+ V    D   
Sbjct: 228 LVGDVE---FYTQLINNVVLPLSAKGFV-FELGYVHQACAVRQALDSNLWGVGTMNDSAT 283

Query: 256 NDRVLLFCR 264
             R ++  R
Sbjct: 284 KLRCVVGWR 292


>gi|163851886|ref|YP_001639929.1| methyltransferase small [Methylobacterium extorquens PA1]
 gi|163663491|gb|ABY30858.1| methyltransferase small [Methylobacterium extorquens PA1]
          Length = 340

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ D+G G+GA  + + K  P  + V VDI+  AL  A+ NA   GV      + SD  S
Sbjct: 161 RVADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGVGN-VRPVHSDMLS 219

Query: 160 SVEGLFDVIVSNPPYI 175
           +VEG FD+IVSNPP++
Sbjct: 220 NVEGSFDLIVSNPPFM 235


>gi|307354001|ref|YP_003895052.1| methylase [Methanoplanus petrolearius DSM 11571]
 gi|307157234|gb|ADN36614.1| methylase [Methanoplanus petrolearius DSM 11571]
          Length = 190

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 29/170 (17%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P  +T LL ++ +       E +   R++++GTG+G +   + + S   + +  DI+ 
Sbjct: 11  YRPEEDTFLLSEAVMH------EIKSTDRVIEIGTGSGFISSGIRERSE--QVIATDINP 62

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLGLEV 187
            A   AK N V        + +++D FS + G FD+++ NPPY+    E  I D L    
Sbjct: 63  YACTTAKKNGV--------EVVRTDLFSGICGTFDLVIFNPPYLPTKAEERIDDWL---- 110

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                  +LDGG DG +  +  A+ +   L+K G C + I      D VR
Sbjct: 111 -----EYALDGGEDGRTTIQKFAEQLGSVLSKTGRCLILISSLTGTDEVR 155


>gi|322388055|ref|ZP_08061661.1| methyltransferase domain protein [Streptococcus infantis ATCC
           700779]
 gi|321141076|gb|EFX36575.1| methyltransferase domain protein [Streptococcus infantis ATCC
           700779]
          Length = 196

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L+L+K +   +   VDI+ +AL++A+ NAV N V       QS+ + 
Sbjct: 60  KILDVGCGYGPIGLSLVK-AYGAQATMVDINNRALDLAQQNAVKNNVQATI--FQSNIYE 116

Query: 160 SVEGLFDVIVSNPP 173
            VEG FD ++SNPP
Sbjct: 117 QVEGQFDHVISNPP 130


>gi|298484042|ref|ZP_07002211.1| SAM-dependent methyltransferase [Bacteroides sp. D22]
 gi|298269823|gb|EFI11415.1| SAM-dependent methyltransferase [Bacteroides sp. D22]
          Length = 236

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 16/162 (9%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER + +Q+D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERIEVVQADFK 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FDVIVSNPPY     VD L       D + +     D L+ Y  + +G +R 
Sbjct: 100 KYRSSDK-FDVIVSNPPY----FVDSLECP----DRQRAAARHNDSLT-YEELLEGGNRL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLV---NAFKDYGG 255
           L  DGL +V I  +    V  I    KL+ +   N     GG
Sbjct: 150 LAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGG 191


>gi|213859939|ref|ZP_03385643.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 245

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 102 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 159

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 160 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 198

Query: 220 DG 221
            G
Sbjct: 199 GG 200


>gi|213622584|ref|ZP_03375367.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 277

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 134 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 191

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 192 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 230

Query: 220 DG 221
            G
Sbjct: 231 GG 232


>gi|322392143|ref|ZP_08065605.1| methyltransferase domain protein [Streptococcus peroris ATCC
           700780]
 gi|321145043|gb|EFX40442.1| methyltransferase domain protein [Streptococcus peroris ATCC
           700780]
          Length = 196

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L+L+K +   +   VDI+ +AL++A+ NAV N V       QS+ + 
Sbjct: 60  KILDVGCGYGPIGLSLVK-AYGVQATMVDINNRALDLAQQNAVKNNVQATI--FQSNIYD 116

Query: 160 SVEGLFDVIVSNPP 173
            VEG FD ++SNPP
Sbjct: 117 QVEGQFDHVISNPP 130


>gi|157150082|ref|YP_001450367.1| methyltransferase domain-containing protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157074876|gb|ABV09559.1| methyltransferase domain protein [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 197

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDLG G G + L L+K S   K   VDI+ +AL++A+ NA  N VS   +  QS+ +  
Sbjct: 61  ILDLGCGYGPLGLTLVK-SQAVKATLVDINLRALDLARKNAELNKVSA--EIFQSNVYDQ 117

Query: 161 VEGLFDVIVSNPP 173
           V G+FD I+SNPP
Sbjct: 118 VTGIFDHIISNPP 130


>gi|254282238|ref|ZP_04957206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR51-B]
 gi|219678441|gb|EED34790.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR51-B]
          Length = 301

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 84/159 (52%), Gaps = 7/159 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+D+  G G++ +    E P  + + +DI  KAL +A+ N   +G+  +  T+++D   
Sbjct: 124 RIVDVCCGGGSLGILAATEFPGAEVLCLDIDEKALALAEENIARHGLQGQISTVRADLLG 183

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHL 217
            +     D+I++NPPY+++  +  L  E   ++PR++L+ G DGL   +R +    SR L
Sbjct: 184 PLSPDSVDIILANPPYVDAQDMADLPAEY-SWEPRLALEAGDDGLDLVHRLLVQAASR-L 241

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            + G   +E+G N    + R F   +   +    ++GG+
Sbjct: 242 RESGYLFLEVG-NSWPAMERAFPRFEFLWLE--PEWGGH 277


>gi|307243788|ref|ZP_07525920.1| methyltransferase small domain protein [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492842|gb|EFM64863.1| methyltransferase small domain protein [Peptostreptococcus stomatis
           DSM 17678]
          Length = 249

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R++K    +++DLGTGTG + + L  +S   K +G++I  +  E+A  + 
Sbjct: 32  IDAVLLANFTRVKKN--AKLVDLGTGTGIIPILLAGKSSASKIIGIEIQDEVAEMASRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
             N + +R + L  D   +V    +G  D++VSNPPY+ S
Sbjct: 90  KLNQLEDRVEILNMDMKDAVGVLGKGQMDLVVSNPPYMHS 129


>gi|116617402|ref|YP_817773.1| 16S RNA G1207 methylase RsmC [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096249|gb|ABJ61400.1| 16S rRNA m(2)G 1207 methyltransferase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 211

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEI 136
           T  ++D+    S+P      + ++LDLGTG G V L + K   + + V  VD++ +AL++
Sbjct: 52  TRTMLDALEKTSIP------IGKVLDLGTGYGPVGLTVAK--AYQRHVDMVDVNERALDL 103

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ NA  NGV++R +  +SD ++S+   + +I+ NPP
Sbjct: 104 ARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPP 140


>gi|298252616|ref|ZP_06976410.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis 5-1]
 gi|297532980|gb|EFH71864.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis 5-1]
          Length = 304

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 26/176 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTG 107
           E +  I+G   F  + L +    F PRPETE++V++ L +     I K  VV   DL  G
Sbjct: 73  EPLQHIVGRAPFRYLDLQVGKGVFVPRPETEIVVEAGLDWLRESGISKPTVV---DLCAG 129

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTLQSDWFSS 160
           +GA+ L++  E    +   V+ S +A +  + N            +  R+  + +D   S
Sbjct: 130 SGAIGLSIAAEVADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVLADATKS 189

Query: 161 -----------VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG-IDGL 203
                      + G  D++++NPPY+ ES + +   +EVR++DP ++L GG  DGL
Sbjct: 190 HISDCTPELHAICGKVDLVITNPPYVPESQVPE--QVEVREYDPPLALYGGSADGL 243


>gi|91775778|ref|YP_545534.1| methyltransferase small [Methylobacillus flagellatus KT]
 gi|91709765|gb|ABE49693.1| methyltransferase small [Methylobacillus flagellatus KT]
          Length = 321

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 5/91 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R +D+G+G+GA  + L +  P  +  GVDI+ +AL +A  N +  G+      L SD 
Sbjct: 142 VYRAVDIGSGSGAGAIMLAQRLPQAEVYGVDINDQALALAAINGIAAGLFN-LHWLHSDL 200

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
             +++G FD+I+SNPP+    +VD  G   R
Sbjct: 201 LQALDGEFDLIISNPPF----LVDAAGRAYR 227


>gi|229070918|ref|ZP_04204146.1| Modification methylase, HemK [Bacillus cereus F65185]
 gi|228712308|gb|EEL64255.1| Modification methylase, HemK [Bacillus cereus F65185]
          Length = 260

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV  A A     +   D+V  +DL  G+GA
Sbjct: 51  LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEAL----LCFGDIV--VDLCCGSGA 104

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V +AL       +   VDI   A+  A  N VTN     F+  L      +++G  + +V
Sbjct: 105 VGVALAAALGRIELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ +  +  L  E R  +P+++LDGG DGL   R +A      L   G   +E   
Sbjct: 164 ANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLASGGHLLIETSE 223

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF    L
Sbjct: 224 MQATQTFEIFAGAGL 238


>gi|331645067|ref|ZP_08346178.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M605]
 gi|330909815|gb|EGH38325.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           AA86]
 gi|331045824|gb|EGI17943.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M605]
          Length = 343

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|228953746|ref|ZP_04115786.1| Modification methylase, HemK [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229080682|ref|ZP_04213201.1| Modification methylase, HemK [Bacillus cereus Rock4-2]
 gi|228702620|gb|EEL55087.1| Modification methylase, HemK [Bacillus cereus Rock4-2]
 gi|228805980|gb|EEM52559.1| Modification methylase, HemK [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 260

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV  A A     +   D+V  +DL  G+GA
Sbjct: 51  LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEAL----LCFGDIV--VDLCCGSGA 104

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V +AL       +   VDI   A+  A  N VTN     F+  L      +++G  + +V
Sbjct: 105 VGVALAAALGRIELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ +  +  L  E R  +P+++LDGG DGL   R +A      L   G   +E   
Sbjct: 164 ANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLASGGHLLIETSE 223

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF    L
Sbjct: 224 MQATQTFEIFAGAGL 238


>gi|218703063|ref|YP_002410692.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           IAI39]
 gi|226712941|sp|B7NVD9|RSMC_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218373049|emb|CAR20939.1| 16S RNA m2G1207 methylase [Escherichia coli IAI39]
          Length = 343

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|320195321|gb|EFW69949.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           WV_060327]
          Length = 343

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|317495084|ref|ZP_07953455.1| methyltransferase small domain-containing protein [Gemella
           moribillum M424]
 gi|316914791|gb|EFV36266.1| methyltransferase small domain-containing protein [Gemella
           moribillum M424]
          Length = 198

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 49/79 (62%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +++V  + D+G G G + + L K++P +    VD++ ++L + K N   N +  + + ++
Sbjct: 55  QKEVANVADIGCGYGVISIVLAKQNPGYSFTMVDVNNRSLVLTKKNIELNRIENKVEIIE 114

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           S  F +V+G FD++++NPP
Sbjct: 115 SSSFDNVKGDFDIVLTNPP 133


>gi|227431251|ref|ZP_03913305.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227353013|gb|EEJ43185.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 211

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 59/97 (60%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEI 136
           T  ++D+    S+P      + ++LDLGTG G V L + K   + + V  VD++ +AL++
Sbjct: 52  TRTMLDALEKTSIP------IGKVLDLGTGYGPVGLTVAK--AYQRHVDMVDVNERALDL 103

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ NA  NGV++R +  +SD ++S+   + +I+ NPP
Sbjct: 104 ARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPP 140


>gi|26251256|ref|NP_757296.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           CFT073]
 gi|227885143|ref|ZP_04002948.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           83972]
 gi|300980808|ref|ZP_07175189.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|301048334|ref|ZP_07195364.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|331661001|ref|ZP_08361933.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA206]
 gi|81472610|sp|Q8FA64|RSMC_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|26111689|gb|AAN83870.1|AE016772_48 Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           CFT073]
 gi|227837972|gb|EEJ48438.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           83972]
 gi|300299794|gb|EFJ56179.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300409125|gb|EFJ92663.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|307556603|gb|ADN49378.1| 16S RNA G1207 methylase RsmC [Escherichia coli ABU 83972]
 gi|315293340|gb|EFU52692.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|315298365|gb|EFU57620.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|331052043|gb|EGI24082.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA206]
          Length = 343

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|282880314|ref|ZP_06289028.1| methyltransferase small domain protein [Prevotella timonensis CRIS
           5C-B1]
 gi|281305816|gb|EFA97862.1| methyltransferase small domain protein [Prevotella timonensis CRIS
           5C-B1]
          Length = 233

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDW 157
           RILD+GTGTG + L + +  P  + V +DI C+A + A  N  T+  ++R   D +    
Sbjct: 38  RILDVGTGTGLIALMMAQRYPQARIVAIDIDCEACKQAAENVATSPFADRIAVDNVPLQQ 97

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +  E  FD IV+NPPY     +D L    R+ D + +L      L  Y+ +  GV   L
Sbjct: 98  LNDTEE-FDAIVTNPPY----FIDSL----RNPDEQKALARHACSLP-YKDLCKGVQLLL 147

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +  G+ SV +  +     V       L+L   +K
Sbjct: 148 SSRGIFSVVLPTDNMEKFVAEAAFAGLYLYKQYK 181


>gi|255721327|ref|XP_002545598.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136087|gb|EER35640.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 308

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 108/247 (43%), Gaps = 26/247 (10%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           +   NA+++  K   +  IL  + F  + +        PR ETE      L  +L +I K
Sbjct: 46  YEWANAVLQRQKLVPLQYILKSQPFGELSIICREGVLIPRWETEEWC-IKLIHALKQIPK 104

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIA-------KSNAVTNGV 146
           +D + ILD+ TGTG + L +  E   +     G D+S KA E+A       K     N V
Sbjct: 105 QDELSILDVCTGTGCIPLLMAHELREYAPQIHGFDVSGKAYELAIENLEAYKKKYPHNKV 164

Query: 147 SERF---DTLQSDWFSSVE-GLFDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISL 196
           +  +   D   ++  S +     D+I SNPPYI       S   D +   VR ++P+++L
Sbjct: 165 TLNYHLGDVFDAEIISKLSIPRIDLITSNPPYIPMEDYVRSARQDGVEKSVRLYEPKLAL 224

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYG 254
            G  DG  +Y  + + V +   +  +   E+GY  + D V     + L  + V   KD  
Sbjct: 225 VG--DGEFYYALLQNIVIQSAAEGFI--FEVGYKDQADFVNTEVQKNLNSWKVGIMKDGA 280

Query: 255 GNDRVLL 261
              R +L
Sbjct: 281 SKVRCVL 287


>gi|330961454|gb|EGH61714.1| hypothetical protein PMA4326_23191 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 314

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P      VDI+ KAL  A++NA   G+    +   SD 
Sbjct: 135 ISRAVDIGCGTGAGGLLIAVACPGAHVYAVDINPKALHFAETNAAVAGL-HNVECCPSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S V G FD+IV+NPPY++
Sbjct: 194 LSGVTGNFDLIVANPPYMK 212


>gi|226713006|sp|A1S321|RSMC_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 341

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T LL+D+     LP++E R    +LD G G G + +AL++++P  +   VDI+  AL   
Sbjct: 190 TALLLDN-----LPKLEGR----VLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSC 240

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + +   NG+  +     SD  +  +GLF+ IVSNPP+
Sbjct: 241 ELSLKANGMEAK--VYASDGLAQTDGLFNAIVSNPPF 275


>gi|119773707|ref|YP_926447.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis
           SB2B]
 gi|119766207|gb|ABL98777.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B]
          Length = 320

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T LL+D+     LP++E R    +LD G G G + +AL++++P  +   VDI+  AL   
Sbjct: 169 TALLLDN-----LPKLEGR----VLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSC 219

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + +   NG+  +     SD  +  +GLF+ IVSNPP+
Sbjct: 220 ELSLKANGMEAK--VYASDGLAQTDGLFNAIVSNPPF 254


>gi|260912922|ref|ZP_05919407.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
           dagmatis ATCC 43325]
 gi|260632912|gb|EEX51078.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
           dagmatis ATCC 43325]
          Length = 328

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I++    ++LDLG G G +   + +++P  + +  DI   AL  AK   
Sbjct: 173 LDAGTDLLLSTIDQSIRGKVLDLGCGAGVIGAYIKQQNPKTQVIMTDIHAMALASAKRTL 232

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +    D L SD FS +EG FD+I+SNPP+ + V
Sbjct: 233 AENKLEA--DVLASDVFSHIEGKFDLIISNPPFHDGV 267


>gi|213024819|ref|ZP_03339266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 120

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            VDIS  AL +A+ N   +G+      ++SD F  +  + +D+IV+NPPY+++  +  L 
Sbjct: 4   AVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLP 63

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            E R  +P + L  G DGL   R I      +L+ DG+   E+G
Sbjct: 64  NEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG 106


>gi|218507715|ref|ZP_03505593.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli Brasil 5]
          Length = 100

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 14  VTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           V GL   SS +++      +   Q   ++ A+ R L HE +HRILG R+FY + L LS++
Sbjct: 32  VAGLLKQSSTELLTRSAEKISPDQIAMISKALERRLGHEPVHRILGEREFYGLPLQLSAE 91

Query: 71  TFEPRPETE 79
           T EPRP+TE
Sbjct: 92  TLEPRPDTE 100


>gi|161504897|ref|YP_001572009.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|226712971|sp|A9MRB9|RSMC_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|160866244|gb|ABX22867.1| hypothetical protein SARI_03023 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 342

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    D   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAVNGLDG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+     RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRSAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|329962821|ref|ZP_08300706.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
 gi|328529378|gb|EGF56291.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
          Length = 235

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +V R+LD+GTGTG + L L + +P  K   ++I   A E AK+N + +  ++R + L  D
Sbjct: 37  NVKRVLDVGTGTGLIALQLAQRNPHAKITAIEIDTVAAEQAKNNVLHSPWADRIEVLCLD 96

Query: 157 WFS-SVEGLFDVIVSNPPY 174
           + +   +  FD+IVSNPPY
Sbjct: 97  FRNYQQDDKFDLIVSNPPY 115


>gi|300933020|ref|ZP_07148276.1| putative transferase [Corynebacterium resistens DSM 45100]
          Length = 534

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK--SNAVTNGVS-ERFDTLQ 154
           V  ILDLG G+G + L L   SP  +  G DIS +AL  A+        GV     + L 
Sbjct: 169 VTEILDLGCGSGVLSLLLESNSPSVRVTGTDISQRALAFARLGRAGTARGVEPNNVEWLH 228

Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175
             WF  V G  FDVIVSNPP++
Sbjct: 229 GSWFEPVRGRTFDVIVSNPPFV 250


>gi|261749389|ref|YP_003257074.1| putative protoporphyrinogen oxidase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497481|gb|ACX83931.1| putative protoporphyrinogen oxidase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 296

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K+  I  ++G   F+ +   ++   F PRPETE LV   +       +  + V++ DLGT
Sbjct: 70  KNRPIQYVIGKTSFFGMDFLVNEKVFIPRPETEELVSWIIQ---NHKKNSENVQVFDLGT 126

Query: 107 GTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVE 162
           G+G + + L K+ P  + +  VD+S ++L IA  N+  +      ++ D LQ+     + 
Sbjct: 127 GSGCIGITLKKKLPKIRHIHAVDLSSESLFIANINSKFHKEKIFFKKVDILQNLISLPIL 186

Query: 163 GLF--DVIVSNPPYIESVIVDCLGLEVRDFDP 192
             +  +++VSNPPYI       L   +  ++P
Sbjct: 187 KKYPVNIVVSNPPYIRISEKKLLHPNIFQYEP 218


>gi|45357617|ref|NP_987174.1| hypothetical protein MMP0054 [Methanococcus maripaludis S2]
 gi|45047177|emb|CAF29610.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 202

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 15/164 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++      + P  ++ELL+++     L  ++ + V   LD+GTG+G   +  +K+    
Sbjct: 10  IKIKTHPKVYVPAEDSELLIEN-----LVDVKNKTV---LDVGTGSGIQAINAVKQGAL- 60

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           K +G+DI+  A++ AK N+  N + S++      D F +++  FDVI+ N PY+ +   +
Sbjct: 61  KVIGIDINPYAVDCAKINSELNEIDSKKLFFKTGDLFKNIDEKFDVILFNAPYLPTSDEE 120

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L   +       + DGG DG        D V+ +L KDG+  +
Sbjct: 121 KLEKYLN-----YAFDGGKDGREVLDKFLDEVANYLKKDGIIQI 159


>gi|13508101|ref|NP_110050.1| HemK family methylase [Mycoplasma pneumoniae M129]
 gi|2496353|sp|P75419|Y362_MYCPN RecName: Full=Uncharacterized protein MG259 homolog
 gi|1674165|gb|AAB96122.1| hemk family protein [Mycoplasma pneumoniae M129]
 gi|301633681|gb|ADK87235.1| methyltransferase, HemK family [Mycoplasma pneumoniae FH]
          Length = 453

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 79/148 (53%), Gaps = 10/148 (6%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L S TF+ +P   +    +LA  L  ++ +++   +DL  G+G + +AL K  P     G
Sbjct: 79  LGSLTFKTQPGVFIPRADSLAL-LKVVKAQNLKTAVDLCCGSGTLAIALKKRFPHLNVYG 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCL 183
            D++ +AL++A  NA  N V  ++  +++D+ ++   V    D+I++NPPY+    +D  
Sbjct: 138 SDLNPQALQLAAQNARLNMVEVQW--IEADFLAALAQVNTPIDLIITNPPYLNESQLD-- 193

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             +  + +PR SL    +G+  Y+ + +
Sbjct: 194 --QTLNHEPRNSLVADGNGILFYQKLYN 219


>gi|332669378|ref|YP_004452386.1| methyltransferase small [Cellulomonas fimi ATCC 484]
 gi|332338416|gb|AEE44999.1| methyltransferase small [Cellulomonas fimi ATCC 484]
          Length = 512

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG G   L   + +     VG DIS +AL  A+ NA   GV++R          
Sbjct: 167 RVLDLGTGCGVQALHATRHAHAV--VGTDISARALAFAQLNAALAGVADRTTWRLGSMLE 224

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  FD++VSNPP+    ++   G +V  ++ R   DGG  G +  R + +GV   L 
Sbjct: 225 PVAGERFDLVVSNPPF----VITPRGADVPAYEYR---DGGRAGDAIVRELVEGVGAVLE 277

Query: 219 KDGLCSV 225
             G+  +
Sbjct: 278 PGGVAQL 284


>gi|146422019|ref|XP_001486952.1| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 323

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 18/177 (10%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD- 97
           T A  R L+   +  ILG + F  + +    +   PR ETE  V   L      +EK   
Sbjct: 82  TWAAKRRLRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNI----LEKNSK 137

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTL 153
           +++++D+ TGTG + LA+  + P  +  G+D+S  A+E+ K N        GVS     L
Sbjct: 138 LLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTISFL 197

Query: 154 QSDWFSS-VEGLF--DVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGID 201
             + F      L+  D++ +NPPYI        V ++ +   V+ ++P+++L G ++
Sbjct: 198 VGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVLKSVKKYEPQLALIGDLE 254


>gi|82546721|ref|YP_410668.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii Sb227]
 gi|123557836|sp|Q31SW8|RSMC_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|81248132|gb|ABB68840.1| putative enzyme [Shigella boydii Sb227]
 gi|332090318|gb|EGI95416.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           3594-74]
          Length = 343

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|229104015|ref|ZP_04234691.1| Modification methylase, HemK [Bacillus cereus Rock3-28]
 gi|228679359|gb|EEL33560.1| Modification methylase, HemK [Bacillus cereus Rock3-28]
          Length = 260

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 8/195 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+ +F  +R+ +    F PR  TE LV  A A     +   D+  I+DL  G+GA
Sbjct: 51  LEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVHQAEAL----LCFGDI--IVDLCCGSGA 104

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIV 169
           V +AL       +   VDI   A+  A  N VTN     F+  L      +++G  + +V
Sbjct: 105 VGVALAAALGRVELYSVDIDPVAVRCASRN-VTNFGGHVFEGDLYKALPHALKGHVNTLV 163

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N PY+ +  +  L  E R  +P+++LDGG DGL   R +A      L   G   +E   
Sbjct: 164 ANVPYVPTEAIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSE 223

Query: 230 NQKVDVVRIFESRKL 244
            Q      IF    L
Sbjct: 224 MQANQTFEIFAGAGL 238


>gi|327405947|ref|YP_004346785.1| methyltransferase small [Fluviicola taffensis DSM 16823]
 gi|327321455|gb|AEA45947.1| methyltransferase small [Fluviicola taffensis DSM 16823]
          Length = 233

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWF 158
           R+LD+GTGTG + L   +  PF + +G++IS +A+  A+ NA  N    +   + Q+   
Sbjct: 38  RLLDIGTGTGVLALMCAQRFPFQEIIGLEISEEAIIDAQINAQNNPFDTKITIVNQAIQD 97

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +  FD I+SNPP+ E+          ++ + + SL    + LS +  +   ++R L 
Sbjct: 98  YKPKEKFDAIISNPPFFEN--------SSKNPNDQKSLARHTESLS-FSELLQSITRLLT 148

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            +G   + I +    +++++  + +LF+ +    +G
Sbjct: 149 AEGKAWIIIPFESTENIIQLANANELFIADLITLFG 184


>gi|290558986|gb|EFD92368.1| methylase [Candidatus Parvarchaeum acidophilus ARMAN-5]
 gi|326422531|gb|EGD71927.1| Methylase [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS']
          Length = 193

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 18/157 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+ TG+G + +   K +       VDI+  A++ A+ N+  NG+ +    ++SD FS 
Sbjct: 31  VLDMFTGSGIIAINAAKTA--HNVTAVDINPFAIDAARKNSKINGI-KNIKFIKSDLFSE 87

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +E   FDVI +NPPY+        G + +D+    +L+GG DG      +   + +HL K
Sbjct: 88  LENKKFDVIYANPPYLP-------GKKAKDW-IDYALNGGKDGNEIILRLIHNLGKHLKK 139

Query: 220 DGLCSVEIGYNQKVDVV------RIFESRKLFLVNAF 250
           +G+  + I      + V        F  RKL+ +N F
Sbjct: 140 EGVAFIIISSLSDTEKVYKEIRRSKFSFRKLYSINFF 176


>gi|25027861|ref|NP_737915.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens
           YS-314]
 gi|259506252|ref|ZP_05749154.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium efficiens YS-314]
 gi|23493144|dbj|BAC18115.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens
           YS-314]
 gi|259166156|gb|EEW50710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium efficiens YS-314]
          Length = 280

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 88/236 (37%), Gaps = 37/236 (15%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            A+ R    E +  ILG      + L +    F PRPETE+L D    +++ R    D  
Sbjct: 56  EAVARRAAREPLQHILGRAPMGPLDLHVGPGVFVPRPETEVLAD----WAVRRGRGVDKP 111

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV---------TNGVSERF 150
            ++DL TG+GA+   +  E        VD S  A+E+    A          T GV    
Sbjct: 112 VVVDLCTGSGALAAYIAHEL-------VDASVTAVELDPGAATWAQRNFDEFTPGVDLVI 164

Query: 151 -DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGIDGL 203
            D         + G  D++VSNPPY+          E  D DP +  D       G  G+
Sbjct: 165 GDVTDPTLLPDLHGRVDIVVSNPPYVP---------ETGDLDPEVYRDPHMAVFSGPTGM 215

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDR 258
                +   +   L   G+  +E        V  +      F+ V   KD  G DR
Sbjct: 216 DVITEMIHLIHALLAPGGVVGIEHDDTTSAAVRDVVTGHGGFVDVAVLKDLTGRDR 271


>gi|262831401|sp|Q8A9H7|TRMN6_BACTN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R + ++ D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 99

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           F      FDVIVSNPPY     VD L       D + S+    D L+ Y  +  GV+  L
Sbjct: 100 FYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150

Query: 218 NKDGLCSVEI 227
            K+G  ++ I
Sbjct: 151 KKEGTFTIVI 160


>gi|29346248|ref|NP_809751.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338143|gb|AAO75945.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 241

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R + ++ D+ 
Sbjct: 44  RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 103

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           F      FDVIVSNPPY     VD L       D + S+    D L+ Y  +  GV+  L
Sbjct: 104 FYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 154

Query: 218 NKDGLCSVEI 227
            K+G  ++ I
Sbjct: 155 KKEGTFTIVI 164


>gi|187730163|ref|YP_001883033.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii CDC
           3083-94]
 gi|226712995|sp|B2TZQ2|RSMC_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|187427155|gb|ACD06429.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           CDC 3083-94]
          Length = 343

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANYVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|322389699|ref|ZP_08063246.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
           903]
 gi|321143538|gb|EFX38969.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
           903]
          Length = 197

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           ++ ++D      L  ++ ++   +LD+G G G + L+L K     +GV V   D++ +AL
Sbjct: 38  SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLAKA----QGVAVTMVDVNERAL 93

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           ++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 94  DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130


>gi|331666196|ref|ZP_08367077.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA271]
 gi|331066407|gb|EGI38284.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA271]
          Length = 343

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|157156493|ref|YP_001465889.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           E24377A]
 gi|157163818|ref|YP_001461136.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli HS]
 gi|209921836|ref|YP_002295920.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli SE11]
 gi|218556905|ref|YP_002389819.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli IAI1]
 gi|256020001|ref|ZP_05433866.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sp. D9]
 gi|300815995|ref|ZP_07096218.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|300824407|ref|ZP_07104520.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|307313695|ref|ZP_07593314.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|309795645|ref|ZP_07690061.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|331680480|ref|ZP_08381139.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H591]
 gi|332281147|ref|ZP_08393560.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
 gi|226712937|sp|A7ZVR0|RSMC_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712943|sp|B7LXT2|RSMC_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712945|sp|A8A899|RSMC_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712949|sp|B6I2Q2|RSMC_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157069498|gb|ABV08753.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           HS]
 gi|157078523|gb|ABV18231.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E24377A]
 gi|209915095|dbj|BAG80169.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           SE11]
 gi|218363674|emb|CAR01333.1| 16S RNA m2G1207 methylase [Escherichia coli IAI1]
 gi|300523049|gb|EFK44118.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300531202|gb|EFK52264.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|306906518|gb|EFN37031.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|308120769|gb|EFO58031.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|315063673|gb|ADT78000.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli W]
 gi|320200514|gb|EFW75100.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           EC4100B]
 gi|323380246|gb|ADX52514.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli KO11]
 gi|323945890|gb|EGB41935.1| methyltransferase small domain-containing protein [Escherichia coli
           H120]
 gi|324016914|gb|EGB86133.1| methyltransferase small domain [Escherichia coli MS 117-3]
 gi|324118324|gb|EGC12218.1| methyltransferase small domain-containing protein [Escherichia coli
           E1167]
 gi|331071943|gb|EGI43279.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H591]
 gi|332103499|gb|EGJ06845.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
          Length = 343

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|323181910|gb|EFZ67322.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1357]
          Length = 333

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 189 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 246

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 247 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 285

Query: 220 DG 221
            G
Sbjct: 286 GG 287


>gi|227833283|ref|YP_002834990.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184268|ref|ZP_06043689.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454299|gb|ACP33052.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
          Length = 525

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 13/153 (8%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P PE  L V SA    L       V  +LDLGTG+G   L  L  +     V  D+  +A
Sbjct: 145 PGPEHVLGVGSASLSLLHSTPTTPVESVLDLGTGSGVQVLGQLDSAQRI--VATDVHERA 202

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           LE+A++  +T    +R +     W+  VE   FD IV+NPP++  V +  +G   RD   
Sbjct: 203 LELARATVLTAEAEDRVELRHGSWYEPVENERFDRIVANPPFV--VGLPEVGHVYRDSG- 259

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            ++LDG  +       +      HLN  G   V
Sbjct: 260 -LNLDGASE------LVVSQAVEHLNPGGTAHV 285


>gi|296876352|ref|ZP_06900404.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432642|gb|EFH18437.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 197

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           ++ ++D      L  ++ ++   +LD+G G G + L+L K     +GV V   D++ +AL
Sbjct: 38  SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLTKA----QGVAVTMVDVNERAL 93

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           ++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 94  DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130


>gi|74314805|ref|YP_313224.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sonnei Ss046]
 gi|260871094|ref|YP_003237496.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
           11128]
 gi|123615410|sp|Q3YU23|RSMC_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|73858282|gb|AAZ90989.1| putative enzyme [Shigella sonnei Ss046]
 gi|257767450|dbj|BAI38945.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
           11128]
 gi|320175421|gb|EFW50523.1| Ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae CDC 74-1112]
 gi|320183349|gb|EFW58203.1| Ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           CDC 796-83]
 gi|323166178|gb|EFZ51956.1| ribosomal RNA small subunit methyltransferase C [Shigella sonnei
           53G]
 gi|323176273|gb|EFZ61865.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1180]
          Length = 343

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|240139009|ref|YP_002963484.1| hypothetical protein MexAM1_META1p2426 [Methylobacterium extorquens
           AM1]
 gi|240008981|gb|ACS40207.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 341

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R  D+G G+GA  + + K  P  + V VDI+  AL  A+ NA   GV      + SD  S
Sbjct: 161 RAADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARLAGVGN-VRPVHSDMLS 219

Query: 160 SVEGLFDVIVSNPPYI 175
           +VEG FD+IVSNPP++
Sbjct: 220 NVEGSFDLIVSNPPFM 235


>gi|206579318|ref|YP_002240577.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
           pneumoniae 342]
 gi|226712957|sp|B5Y286|RSMC_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|206568376|gb|ACI10152.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
           pneumoniae 342]
          Length = 342

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +   L   SP  +    D+S  A+E +++    NG +  
Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFAG- 247

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D   S+ FS V G FD+I+SNPP+                      DG    L   + +
Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285

Query: 210 ADGVSRHLNKDG 221
             G  RHLN  G
Sbjct: 286 IRGAVRHLNSGG 297


>gi|291616166|ref|YP_003518908.1| RsmC [Pantoea ananatis LMG 20103]
 gi|291151196|gb|ADD75780.1| RsmC [Pantoea ananatis LMG 20103]
          Length = 374

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 23/140 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A  L         ++LD+G G G +  +L   SP  +    D+   A+E +K+  
Sbjct: 212 LDAGSALLLSTFTPHTKGKVLDIGCGAGVIAASLPAHSPKVRLWLCDVHAAAIEASKATL 271

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG+    +   S+ FS V G FD+I+SNPP+ E                + SLD    
Sbjct: 272 AANGLEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 313

Query: 202 GLSHYRTIADGVSRHLNKDG 221
                +T+  G  +HLN  G
Sbjct: 314 -----QTLIRGAVKHLNSGG 328


>gi|312866659|ref|ZP_07726873.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
 gi|311097740|gb|EFQ55970.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
          Length = 194

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 9/99 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           ++ ++D      L  ++ ++   +LD+G G G + L+L K     +GV V   D++ +AL
Sbjct: 35  SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGLSLAKA----QGVAVTMVDVNERAL 90

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           ++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 91  DLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 127


>gi|229165089|ref|ZP_04292884.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
 gi|228618352|gb|EEK75382.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
          Length = 213

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NAV N + E    LQS  + +V+G + VI+SNPP
Sbjct: 113 KENAVNNRI-ENIRILQSSVYENVDGKYAVILSNPP 147


>gi|288937273|ref|YP_003441332.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
 gi|290512677|ref|ZP_06552043.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
           1_1_55]
 gi|288891982|gb|ADC60300.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
 gi|289775018|gb|EFD83020.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
           1_1_55]
          Length = 342

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +   L   SP  +    D+S  A+E +++    NG +  
Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFAG- 247

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D   S+ FS V G FD+I+SNPP+                      DG    L   + +
Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285

Query: 210 ADGVSRHLNKDG 221
             G  RHLN  G
Sbjct: 286 IRGAVRHLNSGG 297


>gi|229089232|ref|ZP_04220513.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42]
 gi|228694071|gb|EEL47753.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42]
          Length = 164

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 17  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 72

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 73  G-NVHIFQSSVYENVDGMYAAILSNPP 98


>gi|255607375|ref|XP_002538718.1| methyltransferase, putative [Ricinus communis]
 gi|223510766|gb|EEF23665.1| methyltransferase, putative [Ricinus communis]
          Length = 206

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 22/162 (13%)

Query: 63  VRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + LT+ +  + PR    TE +  +  A  L   E R    +L+LG G+GA  L LL    
Sbjct: 1   MELTVPAGVYAPRAGSSTEFVSRNWWAAHLD--EARG--SLLELGAGSGA--LTLLAARQ 54

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++  G DI   A+  A+ NA  NG+   F   QSD F + +G  FDVI+ N PY     
Sbjct: 55  GWRATGADIDGAAVSSAQENAARNGIEAEFR--QSDLFEAFKGERFDVILFNQPYFHKPD 112

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           V      + D + R++           + + D  +RHLN  G
Sbjct: 113 VQNHERALADLNGRLT-----------QRMLDEAARHLNPGG 143


>gi|229153879|ref|ZP_04282009.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342]
 gi|228629560|gb|EEK86257.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342]
          Length = 199

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N V
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRV 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSIYENVDGMYAAILSNPP 133


>gi|229820159|ref|YP_002881685.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
 gi|229566072|gb|ACQ79923.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
          Length = 257

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 33/214 (15%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E +  ++GW  F   R+ +S   F PR  +ELL   A+  + P            
Sbjct: 44  RRIAGEPLEHVVGWALFAGRRIRVSPGVFVPRSRSELLAREAIRLTRP------------ 91

Query: 104 LGTGTGAVCL------ALLKESPFFKGVGVDISCKALEIAK---SNAVTNGVSERFDTLQ 154
                GAV +        L  +     VG+++    L+ A    +    +GV++     +
Sbjct: 92  -----GAVVVDLCCGAGALAAAIADAVVGLELHAADLDPAAVRDARRTLDGVAQ---VHE 143

Query: 155 SDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            D F+++     G  DV+V+N PY+ +  +  +  E R+ +  ++LDGG DGL   R IA
Sbjct: 144 GDLFAALPQHLRGRVDVLVANTPYVPTDELHLMPREAREHEAPLALDGGGDGLDVQRRIA 203

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              +  L   G   VE+   Q      I  S  L
Sbjct: 204 ADAAGWLTPGGHLLVEVSSRQAPTAAAIMASGGL 237


>gi|322704989|gb|EFY96578.1| hypothetical protein MAA_07861 [Metarhizium anisopliae ARSEF 23]
          Length = 356

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 30/176 (17%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILD 103
           +  ILG + F  + +   S    PRPETE        L+ +              + I+D
Sbjct: 70  LQYILGSQPFGPLDIKCRSGVLIPRPETEAYTYHLVDLIKTGELLGSKSSNDNAELSIVD 129

Query: 104 LGTGTGAVCLALLKE-SPFFKGV---GVDISCKALEIAKSNAVTNG---------VSERF 150
           L TGTG + L L     P F+ +   GVDIS +A+ +AK N   N            ++ 
Sbjct: 130 LCTGTGCIPLLLYTLLQPSFRRLRVRGVDISPQAVGLAKLNVRHNSKLGNIAASQPGQKL 189

Query: 151 DTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISL 196
           D L+ D F         +   D++VSNPPY+     D     LG  VR ++PR++L
Sbjct: 190 DILRGDIFKDQDIALVAQTPCDILVSNPPYVSQRAWDFGQEGLGYSVRKYEPRLAL 245


>gi|127514158|ref|YP_001095355.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella loihica PV-4]
 gi|226712992|sp|A3QHZ8|RSMC_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|126639453|gb|ABO25096.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella loihica PV-4]
          Length = 342

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TELL++      LP ++ R    +LD G G G +  ALLK +P  +   VDI+  AL   
Sbjct: 191 TELLLEH-----LPTLKGR----VLDFGCGAGVITAALLKANPDLELECVDINAMALASC 241

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +     NG+  +     SD  +  +G+FD I+SNPP+
Sbjct: 242 ELTLAANGMQAK--VYASDGLTQTQGMFDAIISNPPF 276


>gi|297196307|ref|ZP_06913705.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722884|gb|EDY66792.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 221

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 23/168 (13%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D   V L L+   + P+ +T LL D+     L R   +    +LD+GTGTGA+ L   + 
Sbjct: 2   DRGAVALVLAPGVYAPQSDTFLLADA-----LEREPLKPGAEVLDVGTGTGALALTAARR 56

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
               +   VD S +A+   + NAV      R   L  D      G  FD+IV NPPY+ +
Sbjct: 57  G--ARVTAVDRSWRAVVATRLNAVL--ARRRVRVLHGDLLDPAMGRRFDLIVCNPPYVPA 112

Query: 178 VIVDCLGLEVRDFDPR----ISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                         PR    ++ D G DG +    I DG +  LN  G
Sbjct: 113 ---------PHAHPPRRGAAVAWDAGHDGRAVLDRICDGAAELLNPSG 151


>gi|49476714|ref|YP_034453.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|196036938|ref|ZP_03104319.1| ybxB protein [Bacillus cereus W]
 gi|196042331|ref|ZP_03109606.1| ybxB protein [Bacillus cereus NVH0597-99]
 gi|218901304|ref|YP_002449138.1| ybxB protein [Bacillus cereus AH820]
 gi|228925354|ref|ZP_04088450.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931603|ref|ZP_04094509.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943907|ref|ZP_04106292.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229119763|ref|ZP_04249024.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201]
 gi|301051838|ref|YP_003790049.1| hypothetical protein BACI_c01280 [Bacillus anthracis CI]
 gi|49328270|gb|AAT58916.1| conserved hypothetical protein, possible methyltransferase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|195990451|gb|EDX54438.1| ybxB protein [Bacillus cereus W]
 gi|196026837|gb|EDX65469.1| ybxB protein [Bacillus cereus NVH0597-99]
 gi|218536109|gb|ACK88507.1| ybxB protein [Bacillus cereus AH820]
 gi|228663664|gb|EEL19243.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201]
 gi|228815740|gb|EEM61976.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828031|gb|EEM73759.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834276|gb|EEM79817.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|300374007|gb|ADK02911.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 199

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133


>gi|300119588|ref|ZP_07057132.1| ybxB protein [Bacillus cereus SJ1]
 gi|298723060|gb|EFI63958.1| ybxB protein [Bacillus cereus SJ1]
          Length = 199

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133


>gi|228912840|ref|ZP_04076487.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846776|gb|EEM91781.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 213

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N +       QS  + +V+G++  I+SNPP
Sbjct: 113 KENAANNKIGN-VHIFQSSVYENVDGMYAAILSNPP 147


>gi|52145117|ref|YP_081712.1| methyltransferase [Bacillus cereus E33L]
 gi|51978586|gb|AAU20136.1| conserved hypothetical protein; possible methyltransferase
           [Bacillus cereus E33L]
          Length = 199

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133


>gi|327396406|dbj|BAK13828.1| ribosomal RNA small subunit methyltransferase C RsmC [Pantoea
           ananatis AJ13355]
          Length = 367

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  +L   SP  +    D+   A+E +K+    NG+    +   S+ FS
Sbjct: 223 KVLDIGCGAGVIAASLPAHSPKVRLWLCDVHAAAIEASKATLAANGLEG--EVFASNVFS 280

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+ E                + SLD         +T+  G  +HLN 
Sbjct: 281 DVTGRFDMIISNPPFHEGT--------------QTSLDAA-------QTLIRGAVKHLNS 319

Query: 220 DG 221
            G
Sbjct: 320 GG 321


>gi|118475870|ref|YP_893021.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415095|gb|ABK83514.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str.
           Al Hakam]
          Length = 213

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 66  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELAKENAANNKI 121

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 122 G-NVHIFQSSVYENVDGMYAAILSNPP 147


>gi|255325130|ref|ZP_05366236.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141]
 gi|255297695|gb|EET77006.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141]
          Length = 523

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L       V  +LDLGTG+G   L  L  +   K    D+  +A
Sbjct: 140 PGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--KITATDVHERA 197

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           LE+A++     G SE+ + LQ  WF  V G  FD +V+NPP++
Sbjct: 198 LELAEATIAATGDSEKVELLQGSWFDPVAGRRFDRLVANPPFV 240


>gi|253568320|ref|ZP_04845731.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842393|gb|EES70473.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 237

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R + ++ D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRIEVVKQDFL 99

Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S      FDVIVSNPPY     VD L       D + S+    D L+ Y  +  GV+  L
Sbjct: 100 SYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150

Query: 218 NKDGLCSVEI 227
            K+G  ++ I
Sbjct: 151 KKEGTFTIVI 160


>gi|282163397|ref|YP_003355782.1| methyltransferase [Methanocella paludicola SANAE]
 gi|282155711|dbj|BAI60799.1| methyltransferase [Methanocella paludicola SANAE]
          Length = 192

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 21/164 (12%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R + N    L  D ++P  ++ LLV++AL       E +   R+L++GTG+G V  +L  
Sbjct: 4   RVYRNKEFELLDDVYDPGEDSYLLVEAALK------EVKPDDRVLEVGTGSGVV--SLFV 55

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +    K V  DIS     IA  NA  NGV      +++D +S +   FD+I+ NPPY+ +
Sbjct: 56  KDIAAKVVATDIS----PIACRNARINGVP----VVRADLYSGICSQFDLIIFNPPYLPT 107

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           V  + LG  +       + DGG+ G          + R L   G
Sbjct: 108 VPEEQLGSWLNR-----AFDGGLTGRREIERFIKDIDRILAPGG 146


>gi|225862153|ref|YP_002747531.1| ybxB protein [Bacillus cereus 03BB102]
 gi|229182495|ref|ZP_04309746.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1]
 gi|225786254|gb|ACO26471.1| ybxB protein [Bacillus cereus 03BB102]
 gi|228600950|gb|EEK58519.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1]
          Length = 199

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133


>gi|298385622|ref|ZP_06995180.1| SmtA protein [Bacteroides sp. 1_1_14]
 gi|298261763|gb|EFI04629.1| SmtA protein [Bacteroides sp. 1_1_14]
          Length = 237

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R + ++ D+ 
Sbjct: 40  RILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAVQAKENVARSPWKDRIEVVKQDFL 99

Query: 159 S-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S      FDVIVSNPPY     VD L       D + S+    D L+ Y  +  GV+  L
Sbjct: 100 SYQSPDKFDVIVSNPPY----FVDSLSCP----DQQRSMARHNDSLT-YEKLLKGVADLL 150

Query: 218 NKDGLCSVEI 227
            K+G  ++ I
Sbjct: 151 KKEGTFTIVI 160


>gi|126465946|ref|YP_001041055.1| methyltransferase small [Staphylothermus marinus F1]
 gi|126014769|gb|ABN70147.1| methyltransferase small [Staphylothermus marinus F1]
          Length = 193

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   T E    T L     VD      L  I+  D   +LD+G G G + L + K 
Sbjct: 16  IPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGCGYGVIGLTIAKL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173
           +P  K   VDI+  A++I K NA  N + ++   LQ D +  V+ L F+ I SNPP
Sbjct: 76  NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVVVLQGDVYEPVKNLRFNAIYSNPP 131


>gi|319744973|gb|EFV97302.1| methyltransferase domain protein [Streptococcus agalactiae ATCC
           13813]
          Length = 196

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + +
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           +   FD I+SNPP
Sbjct: 118 ISKTFDYIISNPP 130


>gi|300926393|ref|ZP_07142190.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
 gi|300417588|gb|EFK00899.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
          Length = 343

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A  + SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAGNCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|258509264|ref|YP_003172015.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG]
 gi|257149191|emb|CAR88164.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG]
 gi|259650546|dbj|BAI42708.1| 16S rRNA methylase [Lactobacillus rhamnosus GG]
          Length = 198

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA +LP         ILD+G G G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  NG++     ++S  + S++  F V+V+NPP
Sbjct: 99  KQNAADNGITN-VSIIESSMYDSIDDQFAVVVTNPP 133


>gi|22537113|ref|NP_687964.1| hypothetical protein SAG0952 [Streptococcus agalactiae 2603V/R]
 gi|25010994|ref|NP_735389.1| hypothetical protein gbs0940 [Streptococcus agalactiae NEM316]
 gi|76788359|ref|YP_329668.1| methyltransferase domain-containing protein [Streptococcus
           agalactiae A909]
 gi|77406474|ref|ZP_00783529.1| Methyltransferase small domain family [Streptococcus agalactiae
           H36B]
 gi|77411028|ref|ZP_00787383.1| Methyltransferase small domain family [Streptococcus agalactiae
           CJB111]
 gi|77413257|ref|ZP_00789454.1| Methyltransferase small domain family [Streptococcus agalactiae
           515]
 gi|22533974|gb|AAM99836.1|AE014235_9 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|23095394|emb|CAD46599.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563416|gb|ABA46000.1| methyltransferase domain protein [Streptococcus agalactiae A909]
 gi|77160717|gb|EAO71831.1| Methyltransferase small domain family [Streptococcus agalactiae
           515]
 gi|77162952|gb|EAO73908.1| Methyltransferase small domain family [Streptococcus agalactiae
           CJB111]
 gi|77174909|gb|EAO77723.1| Methyltransferase small domain family [Streptococcus agalactiae
           H36B]
          Length = 196

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + +
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           +   FD I+SNPP
Sbjct: 118 ISKTFDYIISNPP 130


>gi|218262704|ref|ZP_03477062.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223193|gb|EEC95843.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii
           DSM 18315]
          Length = 238

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 17/152 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQS-- 155
           RILD+GTGTG + + L + S   K V   +DI  +A   A+ NA ++  +ER     S  
Sbjct: 40  RILDIGTGTGLIAMMLAQRS---KAVIDAIDIDAEACLQAQENAESSPFAERIKIQHSAL 96

Query: 156 -DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D+  +  GL+D+IVSNPPY     VD L       D + +     D L+    + D   
Sbjct: 97  SDFAQTDTGLYDLIVSNPPY----FVDSLKCP----DQKRNTARHTDTLTLEDLLQDS-R 147

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           + L   G  ++ + Y+QK  +     ++ LFL
Sbjct: 148 KLLAPQGRIALILPYDQKERLTDCIRTQNLFL 179


>gi|296101149|ref|YP_003611295.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295055608|gb|ADF60346.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 342

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG     D   S+ FS
Sbjct: 199 KVLDVGCGAGVLATVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+                      DG    L   +T+  G  RHLN 
Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGIETSLEAAQTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|315926839|gb|EFV06213.1| methyltransferase small domain protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 222

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 19/211 (9%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LC         + ++ D  +D    F L   I R    E    I    DF+ +   +   
Sbjct: 25  LCEYLKKDKAWLFLNQDIKIDHEPYFEL---IKRFKSGEPFEYIFEKVDFWGLEFKIKKG 81

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              PR ++E+L+     F +  + K++    IL++G G+G + + L KE    K    DI
Sbjct: 82  ILIPRYDSEILL-----FQILNLCKKNTFNGILEIGFGSGILSIVLAKELGL-KITACDI 135

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVR 188
           + KALE+A  NA  + V    D    + F  ++  +D I SNPPYI+ S  +D    +  
Sbjct: 136 NPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYPIDIWVQK-- 192

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             +P+ +L GG  G   Y  + + +   L+K
Sbjct: 193 --EPKEALFGGEKG---YEILEEIIHFSLDK 218


>gi|116515142|ref|YP_802771.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285462|sp|Q057M1|RSMC_BUCCC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|116256996|gb|ABJ90678.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 343

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     +    K+   +ILD+G+GTG + +AL K++P  K    DI   A+  +K+N 
Sbjct: 188 IDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNL 247

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + N +  +   L SD +S ++  +D+I+SNPP
Sbjct: 248 IKNNLIGK--VLFSDIYSHIKKRYDLIISNPP 277


>gi|229552941|ref|ZP_04441666.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
 gi|229313685|gb|EEN79658.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
          Length = 206

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA +LP         ILD+G G G + LAL K  P  +    D++ +AL +A
Sbjct: 53  SRVLIAAVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 106

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  NG++     ++S  + S++  F V+V+NPP
Sbjct: 107 KQNAADNGIT-NVSIIESSMYDSIDDQFAVVVTNPP 141


>gi|30260292|ref|NP_842669.1| ybxB protein [Bacillus anthracis str. Ames]
 gi|47525356|ref|YP_016705.1| methyltransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183135|ref|YP_026387.1| ybxB protein [Bacillus anthracis str. Sterne]
 gi|65317558|ref|ZP_00390517.1| COG2813: 16S RNA G1207 methylase RsmC [Bacillus anthracis str.
           A2012]
 gi|165873340|ref|ZP_02217942.1| ybxB protein [Bacillus anthracis str. A0488]
 gi|167636698|ref|ZP_02394985.1| ybxB protein [Bacillus anthracis str. A0442]
 gi|167642036|ref|ZP_02400265.1| ybxB protein [Bacillus anthracis str. A0193]
 gi|170689708|ref|ZP_02880884.1| ybxB protein [Bacillus anthracis str. A0465]
 gi|170709437|ref|ZP_02899844.1| ybxB protein [Bacillus anthracis str. A0389]
 gi|177656135|ref|ZP_02937162.1| ybxB protein [Bacillus anthracis str. A0174]
 gi|190569398|ref|ZP_03022285.1| ybxB protein [Bacillus anthracis Tsiankovskii-I]
 gi|227812774|ref|YP_002812783.1| ybxB protein [Bacillus anthracis str. CDC 684]
 gi|228983356|ref|ZP_04143569.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229602055|ref|YP_002864752.1| ybxB protein [Bacillus anthracis str. A0248]
 gi|254684395|ref|ZP_05148255.1| ybxB protein [Bacillus anthracis str. CNEVA-9066]
 gi|254720822|ref|ZP_05182614.1| ybxB protein [Bacillus anthracis str. A1055]
 gi|254733744|ref|ZP_05191459.1| ybxB protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254739413|ref|ZP_05197113.1| ybxB protein [Bacillus anthracis str. Kruger B]
 gi|254751214|ref|ZP_05203252.1| ybxB protein [Bacillus anthracis str. Vollum]
 gi|254756813|ref|ZP_05208841.1| ybxB protein [Bacillus anthracis str. Australia 94]
 gi|30253613|gb|AAP24155.1| ybxB protein [Bacillus anthracis str. Ames]
 gi|47500504|gb|AAT29180.1| ybxB protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177062|gb|AAT52438.1| ybxB protein [Bacillus anthracis str. Sterne]
 gi|164710920|gb|EDR16495.1| ybxB protein [Bacillus anthracis str. A0488]
 gi|167510002|gb|EDR85419.1| ybxB protein [Bacillus anthracis str. A0193]
 gi|167527872|gb|EDR90699.1| ybxB protein [Bacillus anthracis str. A0442]
 gi|170125654|gb|EDS94574.1| ybxB protein [Bacillus anthracis str. A0389]
 gi|170666333|gb|EDT17120.1| ybxB protein [Bacillus anthracis str. A0465]
 gi|172079855|gb|EDT64967.1| ybxB protein [Bacillus anthracis str. A0174]
 gi|190559491|gb|EDV13489.1| ybxB protein [Bacillus anthracis Tsiankovskii-I]
 gi|227007229|gb|ACP16972.1| ybxB protein [Bacillus anthracis str. CDC 684]
 gi|228776346|gb|EEM24699.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229266463|gb|ACQ48100.1| ybxB protein [Bacillus anthracis str. A0248]
          Length = 199

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133


>gi|229053947|ref|ZP_04195381.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
 gi|228721365|gb|EEL72886.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
          Length = 199

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +AK NA  N +
Sbjct: 52  AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIYMVDVNERALGLAKENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E    LQS  + +V+G + VI+SNPP
Sbjct: 108 -ENIRILQSSVYENVDGKYAVILSNPP 133


>gi|229170952|ref|ZP_04298553.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3]
 gi|228612492|gb|EEK69713.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3]
          Length = 213

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N +       QS  + +V+G++  I+SNPP
Sbjct: 113 KENAANNRIGN-VHIFQSSVYENVDGMYAAILSNPP 147


>gi|239630123|ref|ZP_04673154.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067273|ref|YP_003789296.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
 gi|239527735|gb|EEQ66736.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439680|gb|ADK19446.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
          Length = 198

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA  LP         ILD+GTG G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATILAEELP------TGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N +S     ++S  +  ++G F VIV+NPP
Sbjct: 99  QRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPP 133


>gi|42779182|ref|NP_976429.1| ybxB protein [Bacillus cereus ATCC 10987]
 gi|42735097|gb|AAS39037.1| ybxB protein [Bacillus cereus ATCC 10987]
 gi|324324091|gb|ADY19351.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 199

 Score = 56.2 bits (134), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133


>gi|293375381|ref|ZP_06621662.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325844450|ref|ZP_08168177.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
 gi|292645934|gb|EFF63963.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325489124|gb|EGC91508.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
          Length = 197

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LLV++   F+ P I       ILD+G G G + L+L K  P      VD++ +ALE+A
Sbjct: 44  SRLLVET---FAEPEISGN----ILDVGCGYGPIGLSLAKSYPNRNVHMVDVNQRALELA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA+ NGV E     +S  +  V+  F  I+SNPP
Sbjct: 97  KKNAMNNGV-ENVMIYESHCYEGVDDRFAAILSNPP 131


>gi|191639206|ref|YP_001988372.1| 16S RNA methylase [Lactobacillus casei BL23]
 gi|190713508|emb|CAQ67514.1| 16S RNA methylase [Lactobacillus casei BL23]
 gi|327383284|gb|AEA54760.1| Hypothetical conserved protein [Lactobacillus casei LC2W]
 gi|327386467|gb|AEA57941.1| Hypothetical conserved protein [Lactobacillus casei BD-II]
          Length = 198

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA  LP         ILD+GTG G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATILAEELP------AGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N +S     ++S  +  ++G F VIV+NPP
Sbjct: 99  QRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPP 133


>gi|217957676|ref|YP_002336220.1| ybxB protein [Bacillus cereus AH187]
 gi|222093871|ref|YP_002527921.1| ybxb protein [Bacillus cereus Q1]
 gi|229136947|ref|ZP_04265574.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26]
 gi|229194491|ref|ZP_04321294.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293]
 gi|217063004|gb|ACJ77254.1| ybxB protein [Bacillus cereus AH187]
 gi|221237919|gb|ACM10629.1| ybxB protein [Bacillus cereus Q1]
 gi|228588957|gb|EEK46972.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293]
 gi|228646485|gb|EEL02692.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26]
          Length = 199

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 GN-VHIFQSSVYENVDGMYAAILSNPP 133


>gi|229197607|ref|ZP_04324330.1| Modification methylase, HemK [Bacillus cereus m1293]
 gi|228585871|gb|EEK43966.1| Modification methylase, HemK [Bacillus cereus m1293]
          Length = 220

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 6/194 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+  F  +R+ +    F PR  TE LV  A A S       D+V  +DL  G+GA
Sbjct: 11  LEYVVGYAKFCGLRIEVDRGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 64

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V  AL       +   VDI   A+  A  N  + G       L      S++G    I++
Sbjct: 65  VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVKTILA 124

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           N PY+ +  +  L  E R ++P+++LDGG DGL   R +A      L   G   +E    
Sbjct: 125 NAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 184

Query: 231 QKVDVVRIFESRKL 244
           Q      IF    L
Sbjct: 185 QANQTFEIFAGAGL 198


>gi|222096949|ref|YP_002531006.1| methyltransferase [Bacillus cereus Q1]
 gi|221241007|gb|ACM13717.1| Methyltransferase [Bacillus cereus Q1]
          Length = 217

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 6/194 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+  F  +R+ +    F PR  TE LV  A A S       D+V  +DL  G+GA
Sbjct: 8   LEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 61

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V  AL       +   VDI   A+  A  N  + G       L      S++G  + I++
Sbjct: 62  VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVNTILA 121

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           N PY+ +  +  L  E R ++P+++LDGG DGL   R +A      L   G   +E    
Sbjct: 122 NAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 181

Query: 231 QKVDVVRIFESRKL 244
           Q      IF    L
Sbjct: 182 QVDQTFEIFAGAGL 195


>gi|322696274|gb|EFY88069.1| hypothetical protein MAC_05933 [Metarhizium acridum CQMa 102]
          Length = 278

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 30/158 (18%)

Query: 69  SDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKES 119
           S    PRPETE        L+ +         +    + I+DL TGTG + L L  L +S
Sbjct: 10  SGVLIPRPETEAYTYHLVDLIKTGELLGSKSSDDNAELSIVDLCTGTGCIPLLLYTLLQS 69

Query: 120 PF--FKGVGVDISCKALEIAK---------SNAVTNGVSERFDTLQSDWFSS------VE 162
            F   +  GVDIS +A+ +AK          N  T+   ++ D L+ D F         +
Sbjct: 70  SFQRLRVRGVDISPQAVGLAKLNVYHNAKLGNIATSQPGQKLDILRGDIFKDQDVAPIAQ 129

Query: 163 GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISL 196
              D++VSNPPY+     D     LG  VR ++PR++L
Sbjct: 130 TPCDILVSNPPYVSQKAWDFGQGLLGCSVRKYEPRLAL 167


>gi|332366610|gb|EGJ44354.1| methyltransferase domain protein [Streptococcus sanguinis SK1059]
          Length = 195

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N +S   D  QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVNGIFDHIISNPP 130


>gi|77409396|ref|ZP_00786095.1| Methyltransferase small domain family [Streptococcus agalactiae
           COH1]
 gi|77172005|gb|EAO75175.1| Methyltransferase small domain family [Streptococcus agalactiae
           COH1]
          Length = 156

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + +
Sbjct: 21  LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 77

Query: 161 VEGLFDVIVSNPP 173
           +   FD I+SNPP
Sbjct: 78  ISKTFDYIISNPP 90


>gi|76800405|ref|ZP_00782027.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
           18RS21]
 gi|76584395|gb|EAO61378.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
           18RS21]
          Length = 177

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + +
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-KATMVDINTRALELAKKNATRNGVV--VEVFQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           +   FD I+SNPP
Sbjct: 118 ISKTFDYIISNPP 130


>gi|295394650|ref|ZP_06804869.1| protein-(glutamine-N5) methyltransferase [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972543|gb|EFG48399.1| protein-(glutamine-N5) methyltransferase [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 300

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 86/223 (38%), Gaps = 28/223 (12%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGT 108
           +  I G   F  + + +    F PRPETEL+V  A+     LP     D    +DL TG+
Sbjct: 73  LQHITGVAPFRYLEMHVGPGVFIPRPETELMVTYAIEHLAGLP----GDNHTAIDLCTGS 128

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFD- 166
           GA+ +AL  E P      V++S  A    + N       ER+  T ++     +  L D 
Sbjct: 129 GAIAIALATEVPRTHVHAVELSPDAALYTERNI------ERYRPTFEAHGSDVIPHLGDA 182

Query: 167 ----------VIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSR 215
                     VI  NPPY+   +     +   + DP ++L  GG DG    + I     R
Sbjct: 183 TEFLGATSAQVITCNPPYVARTVEHAPEV---NSDPDLALYGGGKDGSELPQRIIAHAPR 239

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            L   GL   E        V   F       V    DY G DR
Sbjct: 240 LLAPGGLFMCEHAEYNSRTVENAFHRAGFTNVETVGDYTGRDR 282


>gi|332361388|gb|EGJ39192.1| methyltransferase domain protein [Streptococcus sanguinis SK1056]
          Length = 195

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N +S   + LQS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVAATMVDINQRALDLAQKNAERNQISA--EILQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|329297754|ref|ZP_08255090.1| 16S ribosomal RNA m2G1207 methyltransferase [Plautia stali
           symbiont]
          Length = 343

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G+G +  AL + SP  +    D+   A+E +K+    NG+    +   S+ FS
Sbjct: 199 KVLDIGCGSGVLAAALAQHSPKVRLWLCDVHAAAIEASKATLAANGLEG--EVFVSNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+ + +              + SLD          T+  G  +HLN 
Sbjct: 257 DVSGRFDLIISNPPFHDGL--------------QTSLDAA-------HTLIRGAVKHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|257076094|ref|ZP_05570455.1| methyltransferase [Ferroplasma acidarmanus fer1]
          Length = 180

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 26/159 (16%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +  S D ++P  +T L++D+A               +L++G+G+G + + L ++    
Sbjct: 2   INIDYSDDVYKPSDDTYLILDNAECGK----------SVLEMGSGSGLIAITLARQG--H 49

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS +A+ + K NA  N V    + ++SD F ++ G +D I+ NPPY        
Sbjct: 50  SVTAADISPEAINLIKHNAFINNVD--MEIVRSDLFENIHGKYDTIIFNPPY-------- 99

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             L V    P+ +  GG DG +           +LN  G
Sbjct: 100 --LPVEGESPQWA--GGKDGFAVTGKFLATAHEYLNPGG 134


>gi|255536286|ref|YP_003096657.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10]
 gi|262828309|sp|C6X2D2|TRMN6_FLAB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|255342482|gb|ACU08595.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10]
          Length = 231

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 17/164 (10%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   IL++GTGTG V L   + +P      +D++  A E+A  N + +    R   +  D
Sbjct: 35  DAKNILEVGTGTGLVALMTAQRNPTSNITAIDVNPVAAELAAKNFLESHFGHRMRAMHCD 94

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +   +  FD+I+SNPPY E+     D    + R+                ++T+    
Sbjct: 95  YKTFGTQKKFDLIISNPPYFETNPSEKDATARQQRELS--------------FKTLISKT 140

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           +  L  +G   V I +       +  E  KLFL+     YG  +
Sbjct: 141 AEILATEGRFCVIIPFPAGPTFEKTCEENKLFLLRRITVYGNAN 184


>gi|309800086|ref|ZP_07694280.1| methyltransferase small domain superfamily [Streptococcus infantis
           SK1302]
 gi|308116288|gb|EFO53770.1| methyltransferase small domain superfamily [Streptococcus infantis
           SK1302]
          Length = 196

 Score = 55.8 bits (133), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L+L+K +   +   VDI+ +AL++A+ NAV N V       QS+ + 
Sbjct: 60  KILDVGCGYGPIGLSLVK-AYGAQATMVDINNRALDLAQQNAVKNKVQATI--FQSNIYE 116

Query: 160 SVEGLFDVIVSNPP 173
            VEG F+ ++SNPP
Sbjct: 117 QVEGQFNHVISNPP 130


>gi|153003698|ref|YP_001378023.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
 gi|152027271|gb|ABS25039.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
          Length = 414

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++++GTGTG + L L +     + +  D+   A+  A+ NA   G++ER + +++D F 
Sbjct: 236 RVIEVGTGTGVLALVLARAG--ARVIATDVEPAAVACARENAARLGLAERVEVVRADLFP 293

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              G  D++VSNPP++       L   V  +DP
Sbjct: 294 DGVGPADLVVSNPPWLPGEAASPLERAV--YDP 324


>gi|71024435|ref|XP_762447.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
 gi|46097696|gb|EAK82929.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
          Length = 721

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 90/199 (45%), Gaps = 33/199 (16%)

Query: 31  DDRQRF-FLTNAIVRSLKHESIHRILGWRDFYNVR--LTLSSDTFEPRPETELLVDSALA 87
           D R+R  ++T  + R+  +  +  +LG   F +++  LT+      PRPETE      ++
Sbjct: 122 DQRRRLVWMTRQMTRN--NVPLSYLLGSVPFGSLKNELTVRPPVLLPRPETEDWATQVVS 179

Query: 88  --FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF---------FKGVGVDISCKALEI 136
              +L R E+ D VRI+DL TG+G  C+ALL              +K V  D S  A+EI
Sbjct: 180 VLLNLSR-EQLDKVRIVDLCTGSG--CIALLVADALRTRLGAAGEWKVVACDRSPIAVEI 236

Query: 137 AKSNAVT-----NGVSERFDTLQSDWFSS---------VEGLFDVIVSNPPYIESVIVDC 182
           A+ NA       N        +Q+D F             G F +IVSNPPYI       
Sbjct: 237 AQENAQKLGFEINQKQSNLHIVQADIFEDGDMDRLAVIAGGPFGLIVSNPPYIPRREWAT 296

Query: 183 LGLEVRDFDPRISLDGGID 201
           L  EV+  +   +L G  D
Sbjct: 297 LSNEVKQHEDPAALIGERD 315


>gi|270292559|ref|ZP_06198770.1| methyltransferase domain protein [Streptococcus sp. M143]
 gi|270278538|gb|EFA24384.1| methyltransferase domain protein [Streptococcus sp. M143]
          Length = 196

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD    F L  +E  +   +LD+G G G + L+L+K +   +   VDI+ +AL++A
Sbjct: 38  SKKMVDFGSQFLLKCLEVNEGETVLDVGCGYGPLGLSLVK-AYGVQATMVDINNRALDLA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 97  RQNAERNKVEATI--FQSNIYEQVEGKFDHVISNPP 130


>gi|19552425|ref|NP_600427.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|62390089|ref|YP_225491.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|145295340|ref|YP_001138161.1| hypothetical protein cgR_1280 [Corynebacterium glutamicum R]
 gi|21323968|dbj|BAB98594.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|25246523|gb|AAN72320.1| protoporphyrinogen oxidase [Corynebacterium glutamicum]
 gi|41325425|emb|CAF19905.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|140845260|dbj|BAF54259.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 279

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 89/217 (41%), Gaps = 18/217 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ILG      + L +    F PRPETE+L D A+      +EKR   +I+DL TG+G
Sbjct: 66  PLQHILGTAPMGPLDLHVGPGVFIPRPETEVLADWAVRQVAGDVEKR---KIVDLCTGSG 122

Query: 110 AVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
           A+      AL+  + +     V++   A   A+ N        +    D       + V 
Sbjct: 123 ALAAYIGHALIDATLY----AVELDPGAATWAQRNFDEFAPQVKLIHGDVTDPTLLAEVH 178

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D++VSNPPY+     D L  EV   DP +++  G DG+     +   +   L   G 
Sbjct: 179 GTIDLVVSNPPYVPE--SDDLDPEVYQ-DPHMAVFSGADGMDVINKMVHLIFNLLKSGGA 235

Query: 223 CSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
             +E        V ++F     F  +    D  G  R
Sbjct: 236 VGIEHDDTTSDAVRQVFSQHGGFGTIEVLHDLTGRAR 272


>gi|238756520|ref|ZP_04617824.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
           ATCC 29473]
 gi|238705275|gb|EEP97688.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
           ATCC 29473]
          Length = 346

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G +   L K+SP  K    D+S  A++ +++    N +    + + S+ +S
Sbjct: 199 RVLDVGCGAGVLASVLAKQSPKIKWTLSDVSAAAIDASRATLAANDIEA--EVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPY 174
            ++G FD+I+SNPP+
Sbjct: 257 DIQGRFDMIISNPPF 271


>gi|269123723|ref|YP_003306300.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
 gi|268315049|gb|ACZ01423.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
          Length = 202

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K++  ++LD+G G G V L L K     K V  D++ +ALE+A  N   N V E ++  +
Sbjct: 57  KKEKFKLLDIGCGYGTVTLLLSKFYKHSKYVLTDVNDRALELADINCKNNMV-EDYEIYK 115

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           S+ F ++   FD+I+SNPP
Sbjct: 116 SNSFENIHENFDIIISNPP 134


>gi|119714639|ref|YP_921604.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119535300|gb|ABL79917.1| methyltransferase small [Nocardioides sp. JS614]
          Length = 486

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 13/144 (9%)

Query: 84  SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           SA + SL ++  R+ V R LDLGTG G   L L +     + V  D++ +AL IA+ N  
Sbjct: 141 SAASTSLAQLTLREPVGRALDLGTGCGVQALHLARHC--SEVVATDVNQRALRIARFNLD 198

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N V+   D     +F  V +  FD+IV+NPP+   VI    G  +      +  D G+ 
Sbjct: 199 LNAVTTPVDVRAGSFFEPVADDTFDLIVTNPPF---VISPATGERL------VYRDSGLP 249

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
           G      I    + HLN+ G C V
Sbjct: 250 GDRVVEDIVRQAAAHLNEGGWCQV 273


>gi|222153103|ref|YP_002562280.1| methyltransferase [Streptococcus uberis 0140J]
 gi|222113916|emb|CAR42122.1| putative methyltransferase [Streptococcus uberis 0140J]
          Length = 196

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L K +   +   VDI+ +A+E+AK NAV N VS      QS+ +  
Sbjct: 61  VLDVGCGYGPLGISLAK-AQGVQATLVDINNRAIELAKKNAVINNVSATI--FQSNIYEK 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD ++SNPP
Sbjct: 118 VSGTFDHVISNPP 130


>gi|116495718|ref|YP_807452.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei ATCC 334]
 gi|116105868|gb|ABJ71010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus casei ATCC
           334]
          Length = 198

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA  LP         ILD+GTG G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATILAEELP------TGPILDVGTGYGPIGLALAKHFPDRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N +S     ++S  +  ++G F VIV+NPP
Sbjct: 99  QRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPP 133


>gi|253577170|ref|ZP_04854490.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843414|gb|EES71442.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 201

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 5/85 (5%)

Query: 93  IEKRDV---VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           IE  D+     +LD+G G G + LA  + +       +D++ +A+E+AK NA  NGV+  
Sbjct: 50  IEAMDIPEDAEVLDVGCGYGPIGLAAARLATKGHVTMIDVNSRAVELAKENAAANGVNN- 108

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPP 173
              L+SD FS++E   FDV+++NPP
Sbjct: 109 VTVLESDLFSAIENRKFDVVLTNPP 133


>gi|146310194|ref|YP_001175268.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter sp. 638]
 gi|226712951|sp|A4W687|RSMC_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145317070|gb|ABP59217.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter sp. 638]
          Length = 342

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG+    D   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAVLASHSPKVRLTLSDVSAPAVEASRATLAANGLEG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+                      DG    L   +T+  G  RHL  
Sbjct: 257 EVTGRFDIIISNPPF---------------------HDGMETSLEAAQTLIRGAVRHLGS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|163938109|ref|YP_001642993.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
 gi|163860306|gb|ABY41365.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
          Length = 199

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +AK NA  N +
Sbjct: 52  AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLAKENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E    LQS  + +V+G + VI+SNPP
Sbjct: 108 -ENIRILQSSVYENVDGKYAVILSNPP 133


>gi|332970739|gb|EGK09719.1| methyltransferase domain protein [Desmospora sp. 8437]
          Length = 204

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+D+A    LP     +   ILDLG G G V +A    +P  +   VD++ +ALE+A
Sbjct: 48  SRLLIDTA---ELP-----ERGEILDLGCGYGPVGIACSVFAPHCRVTMVDLNRRALELA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  NGVS   + L+SD  S++ +  FD +++NPP
Sbjct: 100 RRNAELNGVSSHVEILESDGLSALGKRRFDSVLTNPP 136


>gi|89889428|ref|ZP_01200939.1| methyltransferase [Flavobacteria bacterium BBFL7]
 gi|89517701|gb|EAS20357.1| methyltransferase [Flavobacteria bacterium BBFL7]
          Length = 240

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---F 150
           + ++   ILD+GTGTG + L L +     +   +++   A E A +N      S+R   F
Sbjct: 33  QDKNPYSILDIGTGTGVISLMLAQRFHSAQIEAIELDEDAYEQAANNFENAAWSDRMFCF 92

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                ++F  VE  +D+I+SNPP+ + S I +   +E      R       D    +  +
Sbjct: 93  HASFQEFFEEVEDTYDLIISNPPFFDSSSIKNDSSIE------RNREQARFDDALPFEEL 146

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             GV + L+ DG+ S  I Y+++   ++I    KLF
Sbjct: 147 LYGVYKLLDDDGIFSCIIPYDRENHFLKIAAHYKLF 182


>gi|148827172|ref|YP_001291925.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|226712956|sp|A5UFI6|RSMC_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|148718414|gb|ABQ99541.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittGG]
          Length = 330

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 29/168 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +  + +   SD FS +EG FD+I+SNPP+ +
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDG 221
                                 GID  + YRT+ + +++   HLN+ G
Sbjct: 268 ----------------------GID--TAYRTVKELITQAKWHLNQGG 291


>gi|310792351|gb|EFQ27878.1| HemK family methyltransferase [Glomerella graminicola M1.001]
          Length = 342

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 38/223 (17%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGT 106
           +  +LG + F  + +        PR ETE     L +  ++  LP  + R + RI+D  T
Sbjct: 70  LQYVLGSQPFGALDIRCRPGVLAPRAETEAYALHLTEMIVSGRLPHPQDRGL-RIVDFCT 128

Query: 107 GTGAVCLALL----KESPFFKGVGVDISCKALEIAKSN--------AVTNGVSERFDTLQ 154
           GTG + LAL     + +      GVD+S  A+ +++ N        A+     E+  + Q
Sbjct: 129 GTGCIALALYEGLARRAARLSVTGVDVSPTAVRLSRENLRHNAGAGALLRPTEEKNVSFQ 188

Query: 155 -SDWFSSVE----GLFDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGG-----I 200
            +D F           D++VSNPPYI   +       +G  VR ++PR++L  G      
Sbjct: 189 LADVFDEAAMATIPQCDILVSNPPYISRKVWTYGRGQMGYSVRKYEPRLALVPGDTTPTY 248

Query: 201 DGLSH----YRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRI 238
           DG  H    Y  + D V+R L    L   E+G   Q V V R+
Sbjct: 249 DGCDHADVFYARLLD-VARRLRPKVLL-FEVGDQEQAVRVARL 289


>gi|308185569|ref|YP_003929700.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
 gi|308056079|gb|ADO08251.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
          Length = 379

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 27/157 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS  A  L         ++LD+G G G +  +L   SP  +    D+   A+E +K   
Sbjct: 217 LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVRLWLCDVHAAAIEASKLTL 276

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG+    +   S+ FS V G FD+I+SNPP+ E                + SLD    
Sbjct: 277 AANGIEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 318

Query: 202 GLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVD 234
                + +  G  +HLN  G    + +  + Y Q +D
Sbjct: 319 -----QALIRGAVKHLNTGGELRIVANTFLPYPQALD 350


>gi|229009610|ref|ZP_04166836.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
 gi|229131108|ref|ZP_04260020.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
 gi|228652321|gb|EEL08246.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
 gi|228751632|gb|EEM01432.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
          Length = 213

 Score = 55.5 bits (132), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E    LQS  + +V+G + VI+SNPP
Sbjct: 113 KENAANNRI-ENIRILQSSVYENVDGKYAVILSNPP 147


>gi|319441592|ref|ZP_07990748.1| putative transferase [Corynebacterium variabile DSM 44702]
          Length = 552

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 19/129 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA----KSNAVTNGVSERFDTLQS 155
           R+LDLGTG+G + L+L  +    + V  DI  +AL+ A    +S   T+G     D  + 
Sbjct: 192 RLLDLGTGSGVLALSLDAD----EVVATDIHGRALDFARASERSGLRTSGERRPVDWREG 247

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +WF  V+G  FD IVSNPP++  V +  +G   RD    + LDG        R +A G +
Sbjct: 248 NWFGPVDGEYFDRIVSNPPFV--VGIGEVGHVYRDSG--LELDGA------SRLVAAGAA 297

Query: 215 RHLNKDGLC 223
            HL+  G  
Sbjct: 298 GHLSPGGTA 306


>gi|317493748|ref|ZP_07952165.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918075|gb|EFV39417.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 346

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +  A+ K SP  K    D+S  ALE +++    N +  +
Sbjct: 189 LSSLEPHMKGKVLDVGCGAGVLSAAMAKMSPKVKLTLTDVSAAALESSRATLAANDI--Q 246

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            + + S+ +S V G FD+I+SNPP+
Sbjct: 247 GEVIASNVYSDVNGRFDMIISNPPF 271


>gi|253988662|ref|YP_003040018.1| modification methylase hemk [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638014|emb|CAR66642.1| modification methylase hemk precursor [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780112|emb|CAQ83273.1| modification methylase hemk precursor [Photorhabdus asymbiotica]
          Length = 283

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 12/234 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           DR R     A+        +  I+G  DF  + LT+ +  F PRP ++++       S  
Sbjct: 44  DRARDEFMLAVHERCNRIPLGHIVGAVDFDGLPLTIGTGIFIPRPHSQIIHKWLENES-- 101

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--VTNGV--S 147
             +      +LDL +G+GA+ LA+ K  P  K   V+    A +    N   + N    +
Sbjct: 102 --QVPQGATVLDLCSGSGAIGLAIAKYRPDLKVTCVEYDDVAFQYLTRNINRLANWAIKA 159

Query: 148 ERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           E       DW  FS       +IV+NPPY+       +  E  +  P  S+  G DGL  
Sbjct: 160 EALKADLWDWQAFSHFNESVGLIVANPPYVPE--QQTILPEWEEHHPYTSVYSGNDGLDL 217

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            R I     + L  +G   +E G +Q   V  +F      L+    D   +D+ 
Sbjct: 218 TRLIIKQARQLLQLNGWLVIEHGESQGERVRALFSDAGFSLIRTIIDEDISDKT 271


>gi|294791499|ref|ZP_06756656.1| putative methyltransferase small domain protein [Scardovia
           inopinata F0304]
 gi|294457970|gb|EFG26324.1| putative methyltransferase small domain protein [Scardovia
           inopinata F0304]
          Length = 243

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 13/129 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L D     +  + E R V   LDLG G G + LAL +E P  +   +D + +A+E+ 
Sbjct: 69  TQVLFDHVPGSAADQAEGRTVATCLDLGCGWGPISLALAREYPQARVWALDSNERAVELT 128

Query: 138 KSNAVTNGVS--------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           ++NA  NG++        +  D   ++W    +  FD+I SNPP    +  D L   +  
Sbjct: 129 QANANRNGLTTIAAGTRQDLEDRYGAEW---TDASFDLIWSNPPI--RIGKDPLHNLLMT 183

Query: 190 FDPRISLDG 198
           + PR+S +G
Sbjct: 184 YLPRLSSNG 192


>gi|293476634|ref|ZP_06665042.1| rsmC [Escherichia coli B088]
 gi|291321087|gb|EFE60529.1| rsmC [Escherichia coli B088]
          Length = 343

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + +A    SP  +    D+S  A+E +++    N V    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSVAFALHSPKIRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V+G FD+I+SNPP+ + +              + SLD         +T+  G  RHLN 
Sbjct: 257 EVKGRFDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|326202932|ref|ZP_08192799.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782]
 gi|325987009|gb|EGD47838.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782]
          Length = 244

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 8/81 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ++LD+GTGTG + + L  ++   K VG++I  +  E+A  +   N +SER + +Q D   
Sbjct: 47  KVLDIGTGTGIIPVLLAGKTKAAKIVGLEIQEEMAEMASRSVTLNQLSERLEIVQGDIKL 106

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              +F      FDV+VSNPPY
Sbjct: 107 YREYFGKSS--FDVVVSNPPY 125


>gi|229157069|ref|ZP_04285150.1| Modification methylase, HemK [Bacillus cereus ATCC 4342]
 gi|228626559|gb|EEK83305.1| Modification methylase, HemK [Bacillus cereus ATCC 4342]
          Length = 260

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 6/194 (3%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ++G+  F  +R+ +    F PR  TE LV  A A S       D+V  +DL  G+GA
Sbjct: 51  LEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSC----FGDIV--VDLCCGSGA 104

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V  AL       +   VDI   A+  A  N  + G       L      S++G    I++
Sbjct: 105 VGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGNVKTILA 164

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           N PY+ +  +  L  E R  +P+++LDGG DGL   R +A      L   G   +E    
Sbjct: 165 NAPYVPTDAIKLLPQEARLHEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLLIETSEM 224

Query: 231 QKVDVVRIFESRKL 244
           Q      IF   +L
Sbjct: 225 QADQTFEIFAGAEL 238


>gi|317473411|ref|ZP_07932705.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA]
 gi|316899061|gb|EFV21081.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA]
          Length = 240

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  +++K     +LDLGTGTG + + +  ++P     G++I  +  E+A  +A
Sbjct: 22  MDAVLLSSFVKVKKNG--NVLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAEMAARSA 79

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175
             NG+ E+ + ++ D   +        FDVI SNPPY+
Sbjct: 80  ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYM 117


>gi|14520648|ref|NP_126123.1| hypothetical protein PAB0284 [Pyrococcus abyssi GE5]
 gi|5457864|emb|CAB49354.1| Predicted rRNA or tRNA methylase [Pyrococcus abyssi GE5]
          Length = 197

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 10/116 (8%)

Query: 61  YN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           YN +R+ +    +EP  +T LL ++ L      + + D+V  LD+GTG+G + L   K++
Sbjct: 5   YNGLRIEVEESVYEPAEDTFLLAEALLE----EVREDDIV--LDVGTGSGILALLAAKKA 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            F   VG+DI+ KA+++A  NA  NG+      + SD F ++ G F +I+ NPPY+
Sbjct: 59  KFV--VGLDINEKAIDLAWRNAQLNGIKNVVFVV-SDLFRNLRGKFTLILFNPPYL 111


>gi|326927696|ref|XP_003210027.1| PREDICTED: hemK methyltransferase family member 1-like [Meleagris
           gallopavo]
          Length = 360

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 44/165 (26%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV--------------DSALAFS 89
           + L+   +  +LG  DF ++ L +    F PRPETE L+              +SA   +
Sbjct: 112 KRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVA 171

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------A 141
           +P         IL++G G+GA+ L+LL + P  + + VD    A+++ + N        A
Sbjct: 172 VPS------PVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHSLSCNQA 225

Query: 142 VTN-----GVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI 175
           VT+     G+S  F   Q        W     G  D IVSNPPY+
Sbjct: 226 VTSTSFQIGISLLFQECQGSAKHLLPW-----GPVDFIVSNPPYV 265


>gi|281422532|ref|ZP_06253531.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205]
 gi|281403356|gb|EFB34036.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205]
          Length = 247

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 30/164 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--------------- 144
           RILD+G+GTG + L + +  P  + VG+D+   A   A+ N + +               
Sbjct: 36  RILDIGSGTGLISLMMAQRFPEAEVVGIDMDADACGQARENVMASPFRDRVEIECCRLQD 95

Query: 145 --GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G SE  + L++       G+FD IVSNPP+     VD L    ++ D + ++    D 
Sbjct: 96  FGGTSEAAEALETADGLKAAGVFDAIVSNPPF----FVDSL----KNPDSKRTMARHTDS 147

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           L  +R +  GV R L+ DG+ S  +     V+VV  F +    L
Sbjct: 148 LP-FRDLFAGVKRLLSDDGIFSAIV----PVEVVEQFVAESCIL 186


>gi|311281054|ref|YP_003943285.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
 gi|308750249|gb|ADO50001.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
          Length = 342

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG     D   S+ FS
Sbjct: 199 KVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+                      DG    L   + +  G  RHLN 
Sbjct: 257 EVTGRFDMIISNPPF---------------------HDGLQTSLEAAQALIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|328887293|emb|CCA60532.1| Uncharacterized methyltransferase [Streptomyces venezuelae ATCC
           10712]
          Length = 229

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 10/108 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL ++     L R E      +LD+GTG     LAL       + V VD+S 
Sbjct: 23  YSPQADTRLLAEA-----LSREELDATTDVLDIGTG--TGALALCAARTGARVVAVDVSW 75

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           +A+  AK NA+  G  +R   L  D+ + V+G  FD+I++NPPY+ S 
Sbjct: 76  RAVIAAKLNAIRQG--QRLRVLHGDFSTRVQGRRFDLILTNPPYVPSA 121


>gi|260596377|ref|YP_003208948.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter turicensis
           z3032]
 gi|260215554|emb|CBA27754.1| Ribosomal RNA small subunit methyltransferase C [Cronobacter
           turicensis z3032]
          Length = 342

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G GTG +   L   SP  +    D+S  A+E +++    NG     + + S+ FS
Sbjct: 199 KVLDVGCGTGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVIASNVFS 256

Query: 160 SVEGLFDVIVSNPPY 174
            ++G FD+I+SNPP+
Sbjct: 257 EIKGRFDMIISNPPF 271


>gi|319896430|ref|YP_004134623.1| ribosomal RNA small subunit methyltransferase c [Haemophilus
           influenzae F3031]
 gi|317431932|emb|CBY80280.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3031]
          Length = 330

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 29/142 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+     L  I+ +   ++LDLG G G +   + K +P  +    DI   ALE A+    
Sbjct: 176 DTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTLS 235

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  + +   SD FS +EG FD+I+SNPP+ +                      GID 
Sbjct: 236 ENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD----------------------GID- 270

Query: 203 LSHYRTIADGVSR---HLNKDG 221
            + YRT+ + +++   HLN+ G
Sbjct: 271 -TAYRTVKELITQAKWHLNQGG 291


>gi|212637945|ref|YP_002314465.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1]
 gi|212559425|gb|ACJ32480.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1]
          Length = 202

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + LAL K+ P      +D++ +A+E+AK N   N + E      SD F  
Sbjct: 65  ILDVGCGYGPIGLALAKDFPHRMVHMIDVNERAIELAKKNKQQNDI-ENVRIYISDLFQR 123

Query: 161 VEGLFDVIVSNPP 173
           VEG F  IV+NPP
Sbjct: 124 VEGKFAAIVTNPP 136


>gi|320539924|ref|ZP_08039583.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica
           str. Tucson]
 gi|320030110|gb|EFW12130.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica
           str. Tucson]
          Length = 348

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A  L  +E     ++LD+G G G V   L K SP  K    D+S  AL+ +++  
Sbjct: 181 LDTGSALLLSTLENSMQGKVLDVGCGAGVVAAVLAKLSPKVKLTLSDVSAAALDSSRATL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             N +  + + + S+ +S++ G FD+I+SNPP+
Sbjct: 241 AANSI--KGEVIVSNVYSNITGRFDMIISNPPF 271


>gi|218884457|ref|YP_002428839.1| Ribosomal RNA small subunit methyltransferase C (RRNA
           (Guanine-n2-)- methyltransferase) [Desulfurococcus
           kamchatkensis 1221n]
 gi|218766073|gb|ACL11472.1| Ribosomal RNA small subunit methyltransferase C (RRNA
           (Guanine-n2-)- methyltransferase) [Desulfurococcus
           kamchatkensis 1221n]
          Length = 200

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + + + K +P  +    D++  A+++A+ NA  N V +R   LQ D +  
Sbjct: 65  VLDIGCGYGVIGIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVEDRVVVLQGDRYKP 124

Query: 161 VEGL-FDVIVSNPP 173
           VEG+ F+ I SNPP
Sbjct: 125 VEGMKFNAIYSNPP 138


>gi|116493224|ref|YP_804959.1| 16S RNA G1207 methylase RsmC [Pediococcus pentosaceus ATCC 25745]
 gi|116103374|gb|ABJ68517.1| 16S rRNA m(2)G 1207 methyltransferase [Pediococcus pentosaceus ATCC
           25745]
          Length = 201

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + ++L K  P  +    D++ +AL +AK NAV N V ++    +SD + 
Sbjct: 61  KILDVGCGYGPIGISLAKSFPEIQVQMTDVNERALGLAKRNAVANSVEKQTQIYKSDAYE 120

Query: 160 SVEGL-FDVIVSNPP------YIESVIVDC 182
           +++   F  I+SNPP       +E++IV+ 
Sbjct: 121 NIDDTDFTTIISNPPVRAGKSVVETIIVEA 150


>gi|147919486|ref|YP_686774.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured
           methanogenic archaeon RC-I]
 gi|110622170|emb|CAJ37448.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured
           methanogenic archaeon RC-I]
          Length = 193

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 26/166 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R + +    L    ++P  ++ LLV++AL       + R   ++L++GTG+G V      
Sbjct: 4   RIYRDKEFELLEGVYDPGDDSFLLVEAALK------DIRAGEKVLEVGTGSGVV------ 51

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            S F K V   I+     IA  NA  NGV    + +++D FS + G FDVI+ NPPY+ +
Sbjct: 52  -SFFVKDVTRVIATDINPIACQNARLNGV----EVVRTDLFSGICGQFDVIIFNPPYLPT 106

Query: 178 VIVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDG 221
                   E    D  +  + DGG DG    R    GV R L   G
Sbjct: 107 S-------EDEKLDTWLNRAFDGGPDGRDVIRQFLAGVKRILPIGG 145


>gi|229027949|ref|ZP_04184102.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271]
 gi|228733337|gb|EEL84166.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271]
          Length = 213

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +       QS  + +
Sbjct: 76  ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRIGN-VHIFQSSVYEN 134

Query: 161 VEGLFDVIVSNPP 173
           V+G++  I+SNPP
Sbjct: 135 VDGMYAAILSNPP 147


>gi|319774960|ref|YP_004137448.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3047]
 gi|329123138|ref|ZP_08251708.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
           11116]
 gi|317449551|emb|CBY85756.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3047]
 gi|327471693|gb|EGF17135.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
           11116]
          Length = 330

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 29/143 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   +++DLG G G +   + K +P  +    DI   ALE A+   
Sbjct: 175 LDTGTELLLSTIDNKIKGKVIDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N +  + +   SD FS++EG FD+I+SNPP+ +                      GID
Sbjct: 235 SENQL--QGEVYASDVFSNIEGKFDLIISNPPFHD----------------------GID 270

Query: 202 GLSHYRTIADGVSR---HLNKDG 221
             + YRT+ + +++   HLN+ G
Sbjct: 271 --TAYRTVKELITQAKWHLNQGG 291


>gi|304396475|ref|ZP_07378356.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
 gi|304355984|gb|EFM20350.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
          Length = 343

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 59/140 (42%), Gaps = 23/140 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS  A  L         ++LD+G G G +  +L   SP  +    D+   A+E +K   
Sbjct: 181 LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPKVRLWLCDVHAAAIEASKLTL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG+    +   S+ FS V G FD+I+SNPP+ E                + SLD    
Sbjct: 241 AANGIEG--EVFASNVFSDVTGRFDMIISNPPFHEGT--------------QTSLDAA-- 282

Query: 202 GLSHYRTIADGVSRHLNKDG 221
                + +  G  +HLN  G
Sbjct: 283 -----QALIRGAVKHLNTGG 297


>gi|229100900|ref|ZP_04231704.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28]
 gi|228682479|gb|EEL36552.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28]
          Length = 199

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +AK NA  N +
Sbjct: 52  AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E    LQS  + +V+G + VI+SNPP
Sbjct: 108 -ENVRILQSSVYENVDGKYAVILSNPP 133


>gi|229094823|ref|ZP_04225828.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29]
 gi|229113777|ref|ZP_04243212.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3]
 gi|228669648|gb|EEL25055.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3]
 gi|228688566|gb|EEL42439.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29]
          Length = 213

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E    LQS  + +V+G + VI+SNPP
Sbjct: 113 KENAANNKI-ENVRILQSSVYENVDGKYAVILSNPP 147


>gi|159026766|emb|CAO89053.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 396

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  +R+ +RILD G GTGA    LL  +PF   V +DIS KALEIAK     
Sbjct: 41  AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFANIVAIDISEKALEIAKERCNR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+ +      F  L  +  +++ G FD+I
Sbjct: 101 SGVAPKHRGSLDFHHLPLESATNLPGEFDLI 131


>gi|254240607|ref|ZP_04933929.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
 gi|126193985|gb|EAZ58048.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
          Length = 316

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S V G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQVPGRFDLIVANPPYL 213


>gi|219871403|ref|YP_002475778.1| phosphatidylserine synthase [Haemophilus parasuis SH0165]
 gi|262828453|sp|B8F678|TRMN6_HAEPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|219691607|gb|ACL32830.1| phosphatidylserine synthase [Haemophilus parasuis SH0165]
          Length = 235

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
            ILDLGTGTG + + L + +   +   +++   A   A+ NA     + R D LQ+D   
Sbjct: 38  HILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQRCPWNNRIDVLQADIMT 97

Query: 157 WFSSVEGLFDVIVSNPPYIE 176
           W S+ +  FD+IVSNPPY E
Sbjct: 98  WKSTKK--FDLIVSNPPYFE 115


>gi|116619371|ref|YP_821527.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
 gi|116222533|gb|ABJ81242.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
          Length = 519

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 17/123 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD+GTG+G   +A L  + + +   G DI+ ++++ A+ N   NG+ +    LQ D + 
Sbjct: 181 LLDVGTGSG---IAALDGARYARHAWGTDIAARSVQFAEFNRRLNGI-QNATMLQGDLYV 236

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            VEGL FD IV++PPY+           VR  +  I  DGG DG    R I +G+ R L 
Sbjct: 237 PVEGLTFDRIVAHPPYV----------PVRK-NELIFRDGGEDGEQILRRIVEGLPRFLR 285

Query: 219 KDG 221
             G
Sbjct: 286 PGG 288


>gi|227533723|ref|ZP_03963772.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227188707|gb|EEI68774.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 198

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA  LP         ILD+GTG G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATILADELP------AGPILDVGTGYGPIGLALAKRFPDRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N +S     ++S  +  ++G F VIV+NPP
Sbjct: 99  QRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPP 133


>gi|145630697|ref|ZP_01786476.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
 gi|144983823|gb|EDJ91273.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
          Length = 330

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   ++LDLG G G +   + K +P  +    DI   ALE A+   
Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSTIKKRAPNAQITMTDIHAMALESARKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +  + +   SD FS +EG FD+I+SNPP+ + +
Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269


>gi|172040576|ref|YP_001800290.1| putative transferase [Corynebacterium urealyticum DSM 7109]
 gi|171851880|emb|CAQ04856.1| putative transferase [Corynebacterium urealyticum DSM 7109]
          Length = 589

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 13/89 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---------VTNGVSER- 149
           RILDLG G GA+ LAL    P    VG DIS +AL+ A  N          ++ GV+   
Sbjct: 214 RILDLGCGGGALSLALQLAYPEAHVVGTDISGRALDFAAINGTQLAQAQGQLSTGVAAPE 273

Query: 150 --FDTLQSDWFSSVEG-LFDVIVSNPPYI 175
              +  +  WF  V G  FD+IVSNPP++
Sbjct: 274 SCIEWREGSWFEPVAGERFDLIVSNPPFV 302


>gi|327459751|gb|EGF06091.1| methyltransferase domain protein [Streptococcus sanguinis SK1057]
          Length = 195

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVNGIFDHIISNPP 130


>gi|229074162|ref|ZP_04207208.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18]
 gi|228708932|gb|EEL61059.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18]
          Length = 199

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +AK NA  N +
Sbjct: 52  AFEMPDVKGN----VLDVGCGYGPIGLSLAKEFQDREIHMVDVNERALGLAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E    LQS  + +V+G + VI+SNPP
Sbjct: 108 -ENVRILQSSVYENVDGKYAVILSNPP 133


>gi|119873045|ref|YP_931052.1| methyltransferase small [Pyrobaculum islandicum DSM 4184]
 gi|119674453|gb|ABL88709.1| methyltransferase small [Pyrobaculum islandicum DSM 4184]
          Length = 225

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  +  A +R L   S   +  +RD     L +    F P       V +ALA S   I+
Sbjct: 3   RAEIARAALRILHAASPAAVYRFRDMA---LYIPRGVFNP----VFAVSTALAIS--HID 53

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   R+ DLGTG+GA+ +AL K          DIS  AL  A+ NA  N V+ +     
Sbjct: 54  ARG--RVADLGTGSGAIAIALAKSPQVETVCAYDISPLALATARVNAEINRVAHKVAICP 111

Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176
           +         +DV+ +NPPY+ 
Sbjct: 112 TRKALLAAAPYDVVTANPPYLP 133


>gi|199599024|ref|ZP_03212431.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001]
 gi|199590060|gb|EDY98159.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001]
          Length = 198

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA +LP         ILD+G G G + LAL K  P  +    D++ +AL +A
Sbjct: 45  SRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAKHFPNRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  NG++     ++S  +  ++  F V+V+NPP
Sbjct: 99  KQNAADNGITN-VSIIESSMYDGIDDQFAVVVTNPP 133


>gi|190344541|gb|EDK36231.2| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 323

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 18/177 (10%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD- 97
           T A  R  +   +  ILG + F  + +    +   PR ETE  V   L      +EK   
Sbjct: 82  TWAAKRRSRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNI----LEKNSK 137

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFDTL 153
            ++++D+ TGTG + LA+  + P  +  G+D+S  A+E+ K N        GVS     L
Sbjct: 138 SLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTISFL 197

Query: 154 QSDWFSS-VEGLF--DVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDGGID 201
             + F      L+  D++ +NPPYI        V ++ +   V+ ++P+++L G ++
Sbjct: 198 VGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVSKSVKKYEPQLALIGDLE 254


>gi|70732053|ref|YP_261809.1| HemK family modification methylase [Pseudomonas fluorescens Pf-5]
 gi|68346352|gb|AAY93958.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5]
          Length = 326

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R+ D+G GTGA  L + +  P  + + +DI+ +AL     NA   GV        SD 
Sbjct: 147 VRRVADIGCGTGAGALLVARARPEAQVLALDINPRALRYCAINAELAGVGN-VGVYHSDV 205

Query: 158 FSSVEGLFDVIVSNPPYIE 176
              VEG FD+I++NPPY++
Sbjct: 206 LDGVEGNFDLILANPPYMK 224


>gi|16271987|ref|NP_438185.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           Rd KW20]
 gi|260580684|ref|ZP_05848511.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae RdAW]
 gi|1176480|sp|P44453|RSMC_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|1572956|gb|AAC21690.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092746|gb|EEW76682.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae RdAW]
          Length = 330

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K +P  +    DI   ALE A+     N +  + +   SD FS +EG FD+I+SNPP+
Sbjct: 210 KRTPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPF 265


>gi|308048313|ref|YP_003911879.1| methyltransferase small [Ferrimonas balearica DSM 9799]
 gi|307630503|gb|ADN74805.1| methyltransferase small [Ferrimonas balearica DSM 9799]
          Length = 341

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      L  + +  V R+LD G G G +   L + +P  +   VDI+  AL  ++   
Sbjct: 184 LDEGTELLLQHLPEHPVGRVLDFGCGDGVIGAFLARRNPAIELEMVDINAMALAASQQTL 243

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             NG+  +     S+  S VEG FD+IVSNPP+
Sbjct: 244 AQNGLKGK--VYPSNGLSGVEGQFDLIVSNPPF 274


>gi|166366711|ref|YP_001658984.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843]
 gi|166089084|dbj|BAG03792.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843]
          Length = 396

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  +R+ +RILD G GTGA    LL  +PF   V +DIS KALEIAK     
Sbjct: 41  AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFAHVVAIDISEKALEIAKERCNR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+ +      F  L  +  +++ G FD+I
Sbjct: 101 SGVATKHRGSLDFHHLPLESATNLPGEFDLI 131


>gi|325694368|gb|EGD36280.1| methyltransferase domain protein [Streptococcus sanguinis SK150]
          Length = 195

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|283769319|ref|ZP_06342219.1| methyltransferase small domain protein [Bulleidia extructa W1219]
 gi|283104095|gb|EFC05478.1| methyltransferase small domain protein [Bulleidia extructa W1219]
          Length = 197

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G GA+ +++L E    +   VDI+ +AL + +SN V NG+  + +   SD F ++
Sbjct: 64  LDMGCGVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGL--KANVFLSDGFKNI 121

Query: 162 EGLFDVIVSNPP 173
           +  +D IVSNPP
Sbjct: 122 QETYDFIVSNPP 133


>gi|302390844|ref|YP_003826664.1| methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
 gi|302202921|gb|ADL11599.1| Methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
          Length = 256

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 12/118 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  SS+ F         +D+ L      I+ +D  R++DLGTGTG + L L  ++  
Sbjct: 19  NLQIIQSSNHFA------FAIDAVLLADFVEIKPKD--RVIDLGTGTGVIPLLLTGKNDP 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
            + VG++I  K  E+A+ + + N + +  +  ++D     E      FDV+VSNPPY+
Sbjct: 71  DQIVGIEIQVKLAEMAQRSVLYNKLEDVIEIKKADIRQLKEVFAAESFDVVVSNPPYL 128


>gi|324990800|gb|EGC22735.1| methyltransferase domain protein [Streptococcus sanguinis SK353]
          Length = 195

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AHGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|125717866|ref|YP_001034999.1| hypothetical protein SSA_1034 [Streptococcus sanguinis SK36]
 gi|125497783|gb|ABN44449.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
 gi|327489168|gb|EGF20961.1| methyltransferase domain protein [Streptococcus sanguinis SK1058]
          Length = 195

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AHGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|145635202|ref|ZP_01790906.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|229845358|ref|ZP_04465489.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|145267481|gb|EDK07481.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|229811666|gb|EEP47364.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           6P18H1]
          Length = 330

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TEL  D+     L  I+ +   ++LDLG G G +   + K +P  +    DI   ALE A
Sbjct: 173 TEL--DTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESA 230

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +     N +  + +   SD FS +EG FD+I+SNPP+ + +
Sbjct: 231 RKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269


>gi|271499193|ref|YP_003332218.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
 gi|270342748|gb|ACZ75513.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
          Length = 342

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS     L  +E     ++LDL  G G +  +  + SP  +    D+S  ALE +++  
Sbjct: 181 LDSGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVSAAALEASQATL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             NG+  +   + S+ +S ++G FD+I+SNPP+
Sbjct: 241 AANGLEGQ--VIASNAYSDIQGRFDLIISNPPF 271


>gi|114798814|ref|YP_759410.1| hypothetical protein HNE_0681 [Hyphomonas neptunium ATCC 15444]
 gi|114738988|gb|ABI77113.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 247

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+ +LP +EK +   +L+LG G G   L      P     G+++S    ++++  A  NG
Sbjct: 36  LSAALPVLEKGE---MLELGCGCGGALLPAAYRMPGVSFTGLEVSRSVSDMSRKGAALNG 92

Query: 146 VSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL-EVRDFDPRISLDGGID 201
              R    +T  S+W  S E  FD + +NPPY E   +   G  +   +   +SL+G I 
Sbjct: 93  FGPRVTIENTEASEWVKSHENRFDAVFANPPYFEPGKISEPGEGKASAYIETLSLEGWIK 152

Query: 202 GLSH 205
            + H
Sbjct: 153 AMLH 156


>gi|163792422|ref|ZP_02186399.1| Predicted O-methyltransferase [alpha proteobacterium BAL199]
 gi|159182127|gb|EDP66636.1| Predicted O-methyltransferase [alpha proteobacterium BAL199]
          Length = 253

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 16/115 (13%)

Query: 72  FEPRPETELLVDSAL-AFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            +PR    + VD  L A S+P R E+R    +LDLG G GAV L LL   P    V V+ 
Sbjct: 24  LQPRDGYRVAVDPVLLAASVPVRAEQR----VLDLGCGAGAVFLCLLARFPQLSVVAVER 79

Query: 130 SCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                 +A+ N   NGV+ER          L + W  +    FD +V+NPP++ +
Sbjct: 80  DPTMAGLARDNVARNGVAERATVVTADLSALPASWEMAA---FDQVVTNPPFLPA 131


>gi|47570394|ref|ZP_00241034.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241]
 gi|47552936|gb|EAL11347.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241]
          Length = 199

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    K   VD++ +ALE+A+ NA  N +
Sbjct: 52  AFQVPDI-KGD---ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAEENAANNRI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  QS  + +V+G++  I+SNPP
Sbjct: 108 G-NVHIFQSSVYENVDGMYAAILSNPP 133


>gi|218530637|ref|YP_002421453.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
 gi|218522940|gb|ACK83525.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
          Length = 341

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R  D+G G+GA  + + K  P  + V VDI+  AL  A+ NA    V +    + SD  S
Sbjct: 161 RAADIGCGSGAAGILVAKRLPEAEVVLVDINPAALRAARINARL-AVVDNVRPVHSDMLS 219

Query: 160 SVEGLFDVIVSNPPYI 175
           +VEG FD+IVSNPP++
Sbjct: 220 NVEGSFDLIVSNPPFM 235


>gi|260655696|ref|ZP_05861169.1| putative methyltransferase [Jonquetella anthropi E3_33 E1]
 gi|260629613|gb|EEX47807.1| putative methyltransferase [Jonquetella anthropi E3_33 E1]
          Length = 246

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D    +LT+      PR    + +D+ L     R+++R+  R L+LG  TG V + +   
Sbjct: 7   DLLGGQLTIRQPVRGPR----VNMDTILLAGFVRLKRRE--RALELGCATGGVAMLMAWR 60

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
           S      G++I  + +E+A+ NA +NG+S+R   +  D    W     G +DV+ +NPPY
Sbjct: 61  SSAHV-TGLEIDQRFVELARQNAESNGLSDRLSFVCGDLTQLWGRGQGGEYDVVAANPPY 119

Query: 175 IE 176
            E
Sbjct: 120 EE 121


>gi|303240941|ref|ZP_07327452.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
 gi|302591527|gb|EFL61264.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
          Length = 197

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           S+P+I       ILD+G G G + ++L +  P  K   +DI+ +A+++   N   N  + 
Sbjct: 51  SIPQITGE----ILDIGCGYGVIGISLSRLFPSAKVTMIDINERAVDLTTRNIKLNHANN 106

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173
               LQSD F +V G+FDVIVSNPP
Sbjct: 107 A-GALQSDGFINVTGMFDVIVSNPP 130


>gi|270263855|ref|ZP_06192123.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
 gi|270042048|gb|EFA15144.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
          Length = 347

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   +  L  +EK    ++LDLG G G +   L K SP  K    D++  A+E +++  
Sbjct: 181 LDVGSSLLLSTLEKHMKGKVLDLGCGAGVMASVLSKLSPKVKLTLSDVNAAAVESSRATL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             NG+    + + S+ +S + G FD+I+SNPP+
Sbjct: 241 AANGIEG--EVIVSNVYSDITGRFDMIISNPPF 271


>gi|170740785|ref|YP_001769440.1| methyltransferase small [Methylobacterium sp. 4-46]
 gi|168195059|gb|ACA17006.1| methyltransferase small [Methylobacterium sp. 4-46]
          Length = 315

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 5/95 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V R +D+G G+GA  + + K +P  + V VDI+ KAL  A+ NA   GV+       
Sbjct: 133 ERPVRRAVDIGCGSGAAGILIAKRAPGAEVVLVDINEKALRAARLNARAAGVAN-VRARP 191

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S+  S VEG FD+IVSNPP+    +VD  G   RD
Sbjct: 192 SNMLSGVEGAFDLIVSNPPF----MVDAAGRAYRD 222


>gi|332360339|gb|EGJ38151.1| methyltransferase domain protein [Streptococcus sanguinis SK49]
          Length = 195

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N +S   +  QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--EIFQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVNGIFDHIISNPP 130


>gi|258540448|ref|YP_003174947.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
           705]
 gi|257152124|emb|CAR91096.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
           705]
          Length = 198

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+ + LA +LP         ILD+G G G + L L K  P  +    D++ +AL +A
Sbjct: 45  SRVLIAAVLAETLPDGP------ILDVGAGYGPIGLPLAKHFPNRQVTMSDVNERALALA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  NG++     ++S  + S++  F V+V+NPP
Sbjct: 99  KQNAADNGITN-VSIIESSMYDSIDDQFAVVVTNPP 133


>gi|259480051|tpe|CBF70831.1| TPA: hypothetical protein ANIA_10829 [Aspergillus nidulans FGSC A4]
          Length = 359

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 87/204 (42%), Gaps = 41/204 (20%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           R+R   +  + RS +   +  ILG + F  + +  +     PR ETE +          R
Sbjct: 65  RRRLLKSMCLARS-RGVPLQYILGDQPFGELDIKCTKGVLIPRHETEAITIHTAKLIQDR 123

Query: 93  IE--KRD---VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVT 143
           +   +RD    +RILDL TGTG + L L        P    VGVD+S  A+ +AK N   
Sbjct: 124 MTCVERDGAAPLRILDLCTGTGCISLLLHSLLSPCFPRLSIVGVDVSAIAIRLAKENVER 183

Query: 144 NG----VSERFDT-----------LQSDWFSSVEGLF--------------DVIVSNPPY 174
           N     +SER              L S   S +EGLF              DVI+SNPPY
Sbjct: 184 NVRLGLLSERALNEVDFQHGDVLGLSSGPLSQLEGLFDRTTGLSASSGPRCDVIISNPPY 243

Query: 175 --IESVIVDCLGLEVRDFDPRISL 196
             +E          VR F+PR++L
Sbjct: 244 VSVEEYHDGTTSRSVRLFEPRLAL 267


>gi|284041969|ref|YP_003392309.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283946190|gb|ADB48934.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 363

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 20/154 (12%)

Query: 72  FEPRPETELLVD-SALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +EP    ELLVD SA AF + R    +    R L+LGTG+G + ++LL  +   + V V+
Sbjct: 124 YEP---GELLVDISATAFWMARFVANRGPARRALELGTGSG-LLVSLLDAA---EAVAVE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
                 E+A  N + NG+ ER +      F  V +  FD+IV+NPP        CL    
Sbjct: 177 GEPGTAEVATFNVLLNGLDERVEVRAGKLFEPVADEQFDLIVANPP--------CLPAPH 228

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               P  S DGG DG +  R +  GV  HL   G
Sbjct: 229 GVALPPPS-DGGEDGDAVLRQVLAGVGEHLEFGG 261


>gi|261339036|ref|ZP_05966894.1| hypothetical protein ENTCAN_05245 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318871|gb|EFC57809.1| ribosomal RNA small subunit methyltransferase C [Enterobacter
           cancerogenus ATCC 35316]
          Length = 342

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 23/122 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG     + + S+ FS
Sbjct: 199 KVLDVGCGAGVLATVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVIASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD+I+SNPP+                      DG    L   + +  G  RHLN 
Sbjct: 257 DVTGRFDMIISNPPF---------------------HDGMETSLEAAQALIRGAVRHLNS 295

Query: 220 DG 221
            G
Sbjct: 296 GG 297


>gi|297527378|ref|YP_003669402.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
 gi|297256294|gb|ADI32503.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
          Length = 193

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   T E    T L     VD      L  ++  D   +LD+G G G + L + K 
Sbjct: 16  IPLTIRGVTLEFVSYTSLFSGKEVDKGTYLLLKYMDIPDNGEVLDVGCGYGVIGLTIAKL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173
           +P  K   VDI+  A++I K NA  N + ++   LQ D +   + L F+ I SNPP
Sbjct: 76  NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVSVLQGDAYEPFKNLRFNAIYSNPP 131


>gi|326693433|ref|ZP_08230438.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc
           argentinum KCTC 3773]
          Length = 213

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LDLGTG G V +A+ K+  + + V  VD++ +AL +A+ NA  NGV +     QSD +
Sbjct: 70  KVLDLGTGYGPVGVAIAKK--YQRPVDMVDVNERALALAQQNAKQNGVDQLVSVFQSDIY 127

Query: 159 SSVEGLFDVIVSNPP 173
             +   + +I++NPP
Sbjct: 128 QQITDQYALILTNPP 142


>gi|324993041|gb|EGC24961.1| methyltransferase domain protein [Streptococcus sanguinis SK405]
 gi|324995650|gb|EGC27562.1| methyltransferase domain protein [Streptococcus sanguinis SK678]
 gi|327461309|gb|EGF07640.1| methyltransferase domain protein [Streptococcus sanguinis SK1]
 gi|327473947|gb|EGF19360.1| methyltransferase domain protein [Streptococcus sanguinis SK408]
          Length = 195

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + L L K +       VDI+ +AL++A+ NA  N +S   D  QS+ + 
Sbjct: 60  QVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|325696648|gb|EGD38537.1| methyltransferase domain protein [Streptococcus sanguinis SK160]
          Length = 195

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + L L K +       VDI+ +AL++A+ NA  N +S   D  QS+ + 
Sbjct: 60  QVLDVGCGYGPLGLTLAK-AQGVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|306833532|ref|ZP_07466659.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
 gi|304424302|gb|EFM27441.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
          Length = 197

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     +   VDI+ +A+++A+ NA  NGV+   +  QS+ +  
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VSGTFDYIISNPP 130


>gi|167855880|ref|ZP_02478630.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           29755]
 gi|167852968|gb|EDS24232.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           29755]
          Length = 313

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +   L ++ P  K    DI   ALE +K     N +    D + SD FS
Sbjct: 192 KVLDLGCGAGVIGACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            + G FD+IVSNPP+ + V
Sbjct: 250 HIGGRFDLIVSNPPFHDGV 268


>gi|219872063|ref|YP_002476438.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           SH0165]
 gi|219692267|gb|ACL33490.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 313

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +   L ++ P  K    DI   ALE +K     N +    D + SD FS
Sbjct: 192 KVLDLGCGAGVIGACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            + G FD+IVSNPP+ + V
Sbjct: 250 HIGGRFDLIVSNPPFHDGV 268


>gi|325689831|gb|EGD31835.1| methyltransferase domain protein [Streptococcus sanguinis SK115]
          Length = 195

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AYGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVNGIFDHIISNPP 130


>gi|325297717|ref|YP_004257634.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
           DSM 18170]
 gi|324317270|gb|ADY35161.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
           DSM 18170]
          Length = 252

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 22/158 (13%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + L + +     +  G+DI   A+  A  NA+ +  S R    Q+
Sbjct: 53  RQARNVLDIGTGSGLIALMIAQRCQA-QVTGIDIDSDAIGQAGENALASPWSGRIRFCQA 111

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSH-----YRTI 209
           D  +   G++D IVSNPPY               F  R+   DG  +   H     +  +
Sbjct: 112 DAGAFQGGVYDTIVSNPPY---------------FRERVHCPDGQRNAARHTESLTFECL 156

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            D V+R +++DG  SV +        + +   R L+L+
Sbjct: 157 LDAVARLMSEDGSFSVILPAEAGERFITLAAERHLYLL 194


>gi|322373099|ref|ZP_08047635.1| methyltransferase domain protein [Streptococcus sp. C150]
 gi|321278141|gb|EFX55210.1| methyltransferase domain protein [Streptococcus sp. C150]
          Length = 196

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCL 113
            D +++++ L  ++F+   +  +     + F     L  ++  D   +LD+G G G + +
Sbjct: 14  HDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLNSLDLEDGKTLLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +L K     +GV V   DI+ +A+++AK NA  N V    D  QS+ + +V G FD I+S
Sbjct: 74  SLAK----VQGVKVTMIDINSRAIDLAKQNAERNKVD--VDIFQSNIYENVTGNFDYIIS 127

Query: 171 NPP 173
           NPP
Sbjct: 128 NPP 130


>gi|320533183|ref|ZP_08033904.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134615|gb|EFW26842.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 178

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VV   DL TG+GA+   + KE P  + V V+IS  A  +A+ N     V  R + + +D 
Sbjct: 9   VVLTADLCTGSGAIAACVAKEVPGARVVAVEISETAASLARENC-ERLVPGRVEVIHADA 67

Query: 158 -----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGL 203
                   + G  DV+VSNPPY+ +  V+    E    +P ++L  GG DGL
Sbjct: 68  TDPLVLHDLNGQVDVVVSNPPYVPAGAVE--DTETAQHEPTVALYGGGPDGL 117


>gi|296242613|ref|YP_003650100.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM
           11486]
 gi|296095197|gb|ADG91148.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM
           11486]
          Length = 192

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 6/133 (4%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +  T+   TFE    T L     VD      L  ++      +LD+G G G + + L K 
Sbjct: 15  IPFTIHGHTFEFLSYTSLFSGKQVDEGTRLLLENVKTPVEGEVLDVGCGYGVIGIVLAKL 74

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
           +P  +    D++  A++ A+ NA  NGV +R   LQ D +  V+  +F+ I SNPP    
Sbjct: 75  NPRLRVYMTDVNPLAVKTAQHNAELNGVGDRVVILQGDRYEPVKDKVFNAIYSNPPLSAG 134

Query: 178 V-IVDCLGLEVRD 189
           + IV+ + L  RD
Sbjct: 135 MRIVEEIVLGARD 147


>gi|228919051|ref|ZP_04082430.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229041006|ref|ZP_04189769.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
 gi|228727303|gb|EEL78497.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
 gi|228840576|gb|EEM85838.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 213

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|218231310|ref|YP_002364950.1| ybxB protein [Bacillus cereus B4264]
 gi|218159267|gb|ACK59259.1| ybxB protein [Bacillus cereus B4264]
          Length = 199

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 99  KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|229083421|ref|ZP_04215769.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44]
 gi|228699854|gb|EEL52491.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44]
          Length = 213

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K DV   LD+G G G + L+L KE        VD++ +ALE+AK NA  N +
Sbjct: 66  AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALELAKENAANNKI 121

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +     QS  + +V+G +  I+SNPP
Sbjct: 122 -DNVRIFQSSVYENVDGKYAAILSNPP 147


>gi|229148510|ref|ZP_04276766.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
 gi|228634926|gb|EEK91499.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
          Length = 213

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|229142907|ref|ZP_04271348.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
 gi|296500935|ref|YP_003662635.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           BMB171]
 gi|228640528|gb|EEK96917.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
 gi|296321987|gb|ADH04915.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           BMB171]
          Length = 199

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I+      ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 96  GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|254820813|ref|ZP_05225814.1| methylase, putative [Mycobacterium intracellulare ATCC 13950]
          Length = 229

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 9/136 (6%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P+ ++ LLVD      L  I  R   R+LDL TG+G V +A   E         
Sbjct: 13  TQNVYRPQEDSRLLVDVMHETGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCADTTAF 66

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLE 186
           DI  +A+  A+ NA   G+    D  +  W ++VE   FDV+VSNPPY+ +     L   
Sbjct: 67  DICPQAVRCARENAAAAGID--IDVREGSWITAVECAPFDVVVSNPPYVPTPPGAELEEI 124

Query: 187 VRDFDPRISLDGGIDG 202
             +  P  + + G DG
Sbjct: 125 CPEAGPSWAWNAGRDG 140


>gi|228956542|ref|ZP_04118338.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228803107|gb|EEM49929.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 213

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|228963201|ref|ZP_04124370.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228796459|gb|EEM43898.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 199

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I+      ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 96  GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|146280537|ref|YP_001170690.1| HemK family modification methylase [Pseudomonas stutzeri A1501]
 gi|145568742|gb|ABP77848.1| modification methylase, HemK family [Pseudomonas stutzeri A1501]
          Length = 315

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G G+GA  +      P  + + VDI+ +AL +   NA   G ++    L SD 
Sbjct: 135 IRRAVDIGCGSGAGAILTALARPQAEVLAVDINPEALRLTHINAALAG-ADNLRALHSDL 193

Query: 158 FSSVEGLFDVIVSNPPYI 175
            S+V+G FD+I++NPPY+
Sbjct: 194 LSAVDGEFDLILANPPYL 211


>gi|329898826|ref|ZP_08272488.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
           IMCC3088]
 gi|328920726|gb|EGG28195.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
           IMCC3088]
          Length = 300

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 2/130 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LDL  G G++ +         + V  DI   AL +A+ N V + +      +QSD  +
Sbjct: 129 EVLDLCCGGGSLGILAALNHAETQVVLADIDPDALALAQLNVVKHQLESHVQCVQSDVLA 188

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           SV    FD+++ NPPY++S  +  L  E    +P I+L  G DGL   R +   + + L+
Sbjct: 189 SVPPRYFDIVLCNPPYVDSEDMSNLPAEYL-HEPHIALASGRDGLDFTRQLLAQLPKFLH 247

Query: 219 KDGLCSVEIG 228
            + +  +E+G
Sbjct: 248 SNSVVFLELG 257


>gi|218895236|ref|YP_002443647.1| ybxB protein [Bacillus cereus G9842]
 gi|218542476|gb|ACK94870.1| ybxB protein [Bacillus cereus G9842]
          Length = 199

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I+      ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 96  GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|239618399|ref|YP_002941721.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
 gi|239507230|gb|ACR80717.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
          Length = 235

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 10/113 (8%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP+  KR    +L+LGTG+GA+ + L ++    +   +D+  + +EIA  NA  N V+++
Sbjct: 46  LPKATKR----VLELGTGSGAISIYLARKYD-VEITAIDVDEELIEIAHKNARVNNVTDK 100

Query: 150 FDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              +Q     +VE    G FDV+VSNPP+     ++    + R+   R++++G
Sbjct: 101 VKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIESPS-QRRNSSRRLTIEG 152


>gi|228905898|ref|ZP_04069795.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
 gi|228853713|gb|EEM98473.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
          Length = 213

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I+      ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 109

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 110 GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|229107787|ref|ZP_04237423.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
 gi|228675636|gb|EEL30844.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
          Length = 199

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 99  KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|320546792|ref|ZP_08041101.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
 gi|320448564|gb|EFW89298.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
          Length = 196

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 7/120 (5%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D + +++TL   +F    ++ +    +VD      L  +E      +LDLG G G + +
Sbjct: 14  HDIHELKVTLLGQSFTFLTDSGVFSKKMVDYGSQVLLNSLEFNQGETLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +A+++AK NA  NGV    D  QS+ +  V G F+ ++SNPP
Sbjct: 74  SLAKVQGI-KPTMVDINNRAIDLAKQNANKNGVGA--DIYQSNIYEKVIGTFNHVISNPP 130


>gi|288803322|ref|ZP_06408755.1| methyltransferase [Prevotella melaninogenica D18]
 gi|288334142|gb|EFC72584.1| methyltransferase [Prevotella melaninogenica D18]
          Length = 236

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 20/154 (12%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
            RILD+GTGTG + L + +     +   ++I   ALE A  N   +  ++R + L S   
Sbjct: 34  TRILDIGTGTGLIALMMAQRFSIAQIDAIEIDKGALEDAHLNVSASPFNDRINILNSSLQ 93

Query: 156 DWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D+     +  EG++D IV NPPY  + + + L         + +     D LSH   I  
Sbjct: 94  DYIPCSETQEEGIYDAIVCNPPYFINSLKNPL--------QQRTTARHTDTLSHQELIYH 145

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              R L  +G  SV I YN K     I E+  +F
Sbjct: 146 S-KRLLKANGTLSVIIPYNNK----DILEAEAIF 174


>gi|327478774|gb|AEA82084.1| HemK family modification methylase [Pseudomonas stutzeri DSM 4166]
          Length = 315

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G G+GA  +      P  + + VDI+ +AL +   NA   G ++    L SD 
Sbjct: 135 IRRAVDIGCGSGAGAILTALARPQAEVLAVDINPEALRLTHINAALAG-ADNLRALHSDL 193

Query: 158 FSSVEGLFDVIVSNPPYI 175
            S+V+G FD+I++NPPY+
Sbjct: 194 LSAVDGEFDLILANPPYL 211


>gi|323351703|ref|ZP_08087357.1| methyltransferase domain protein [Streptococcus sanguinis VMC66]
 gi|322122189|gb|EFX93915.1| methyltransferase domain protein [Streptococcus sanguinis VMC66]
          Length = 195

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       VDI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AYGVAATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|170695785|ref|ZP_02886927.1| methyltransferase small [Burkholderia graminis C4D1M]
 gi|170139390|gb|EDT07576.1| methyltransferase small [Burkholderia graminis C4D1M]
          Length = 375

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  D+GTGTG V  ALL +    K V  D   +AL  A+ N    G  ++ D +Q+D F 
Sbjct: 198 KAFDVGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLARLGYEQQVDVVQADLFP 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             EG   ++V NPP++ +     +   V D D R+ L G + GLS +
Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEYAVYDPDSRMLL-GFLKGLSEH 300


>gi|291458687|ref|ZP_06598077.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418604|gb|EFE92323.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 243

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++LP +  R+  ++LDLGTGTG + L L  ++   +  G++I   A ++A+ +A  NG  
Sbjct: 34  YALPAV--REGSQLLDLGTGTGVIPLLLSAKTKARRLYGLEIQKSAADLAERSAALNGQE 91

Query: 148 ERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVI 179
            R   L+ D        +    D+++SNPPY++S I
Sbjct: 92  GRIQILRGDIRRIRDFPLSSRMDLVLSNPPYLKSGI 127


>gi|288922983|ref|ZP_06417140.1| modification methylase, HemK family [Frankia sp. EUN1f]
 gi|288345659|gb|EFC80031.1| modification methylase, HemK family [Frankia sp. EUN1f]
          Length = 362

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 27/179 (15%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  + G   F  + + +    F PRPETE +V+ AL         R V   +DL +G+G
Sbjct: 95  PLQHLTGVAGFRRLDIAVGPGVFIPRPETEWVVEGALEALRSLAVARPV--CVDLCSGSG 152

Query: 110 AVCLALLKESPFFKGVGVDISCKALEI------------------------AKSNAVTNG 145
           A+ LAL  E P  +   V++   AL                          A ++A T G
Sbjct: 153 AIALALADELPAAQVHAVEVEPSALGWLRRNVERTGLPVHVHHADVGISADADADAYTGG 212

Query: 146 VSERFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            + R          + + G  D++VSNPPY+       +  EV   DP  +L GG DGL
Sbjct: 213 GAGRPSAPPVRVALADLAGRVDLVVSNPPYLPDRDRALVEPEVGRHDPPAALWGGPDGL 271


>gi|315634703|ref|ZP_07889987.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           segnis ATCC 33393]
 gi|315476651|gb|EFU67399.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           segnis ATCC 33393]
          Length = 334

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   + K  P  K V  DI   ALE A+     N +  +   L SD FS 
Sbjct: 198 VLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQL--QGTVLASDVFSH 255

Query: 161 VEGLFDVIVSNPPYIESV 178
           VEG FD+I+SNPP+ + +
Sbjct: 256 VEGKFDLIISNPPFHDGI 273


>gi|291037415|ref|ZP_06568379.1| HemK family modification methylase [Gluconacetobacter xylinus NBRC
           3288]
          Length = 302

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR +D+G GTG   + + +  P  + V VDI+  AL +A+ NA   GV +     Q D  
Sbjct: 125 VRAVDIGCGTGLGAIMVAQACPGTEVVMVDINPGALRLARINARIAGV-DGIRAWQGDLL 183

Query: 159 SSVEGLFDVIVSNPPYIE 176
           S + G FD+I+SNPPY+ 
Sbjct: 184 SGLAGEFDLILSNPPYLP 201


>gi|13541022|ref|NP_110710.1| RNA methylase [Thermoplasma volcanium GSS1]
 gi|14324405|dbj|BAB59333.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 183

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 24/123 (19%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++++ +R+      +EP  +T LL+  A              R +++G GTG V      
Sbjct: 2   KEYFGIRIEECESVYEPSDDTFLLMQYAECKG----------RAIEIGCGTGLV------ 45

Query: 118 ESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            S +FK  G +I C      A++  K NA  NGVS   +   SD F +  G++D ++ N 
Sbjct: 46  -SIYFKKRGCNIECVDLNQSAVDCTKRNAEINGVS--LNVYASDLFEAARGVYDTVLFNA 102

Query: 173 PYI 175
           PY+
Sbjct: 103 PYL 105


>gi|91794327|ref|YP_563978.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans
           OS217]
 gi|123060654|sp|Q12JX1|RSMC_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91716329|gb|ABE56255.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella denitrificans
           OS217]
          Length = 345

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TELL+       LP++E R    +LD G G G + +ALLK  P  +   +DI+  AL   
Sbjct: 194 TELLLSH-----LPKLEGR----VLDFGCGAGVITVALLKAMPKLELECIDINAMALASC 244

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +     N +  +     SD  + V G FD I+SNPP+
Sbjct: 245 ELTLQANKLQAK--VYPSDGLTQVTGAFDAIISNPPF 279


>gi|222054578|ref|YP_002536940.1| methyltransferase small [Geobacter sp. FRC-32]
 gi|221563867|gb|ACM19839.1| methyltransferase small [Geobacter sp. FRC-32]
          Length = 259

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+  RI DLGTG G + L L K++     VG+D       +A+ N + NG  +R   L  
Sbjct: 39  REGGRIADLGTGCGIIPLLLAKQNKSATIVGIDFQEHMAALARHNVILNGYDDRVSILTE 98

Query: 156 DWFSSVEGL-----FDVIVSNPPY 174
           D  +S++G      FD++VSNPPY
Sbjct: 99  D-IASLKGHFPVSSFDLVVSNPPY 121


>gi|306818472|ref|ZP_07452195.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|304648645|gb|EFM45947.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC
           35239]
          Length = 330

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 111/294 (37%), Gaps = 62/294 (21%)

Query: 21  QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73
           Q +++   + D+R      Q FF   A+V    H   +  ++G   F  ++L      F 
Sbjct: 37  QHVLEHPPLYDERLDAAKYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E        VDIS +A
Sbjct: 94  VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153

Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163
           + + + NA   G+  R               L +D            ++ EG        
Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213

Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                           F VIV+NPPY+   +      E     P+    GG DGL   R 
Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVL 260
             +  ++ L   G   +E G  Q   +V    +R L    A   KD  G  R L
Sbjct: 271 FLENAAKLLVSGGTVVMEHGETQGEALV--VAARDLGFARAHIEKDLAGRPRFL 322


>gi|229159274|ref|ZP_04287298.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
 gi|228624166|gb|EEK80968.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
          Length = 158

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143
           AF +P I K D   ILD+G G G + L+L KE   F+G  V   D++ +AL +AK NA  
Sbjct: 11  AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCNVHMVDVNERALGLAKENAAN 63

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           N + E     QS  + +V+G +  I+SNPP
Sbjct: 64  NRI-ENIRIFQSSVYENVDGKYAAILSNPP 92


>gi|145629135|ref|ZP_01784934.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145639699|ref|ZP_01795302.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittII]
 gi|260582074|ref|ZP_05849869.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
 gi|144978638|gb|EDJ88361.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145271256|gb|EDK11170.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittII]
 gi|260094964|gb|EEW78857.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
 gi|309750669|gb|ADO80653.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2866]
          Length = 330

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   ++LDLG G G +   + K SP  +    DI   ALE A+   
Sbjct: 175 LDTGTGLLLSTIDNKIKGKVLDLGCGAGVIGSMIKKCSPNAQITMTDIHAMALESARKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +  + +   SD FS V+G FD+I+SNPP+ + +
Sbjct: 235 SENQL--QGEVYASDVFSDVQGKFDLIISNPPFHDGI 269


>gi|50310425|ref|XP_455232.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644368|emb|CAG97940.1| KLLA0F03355p [Kluyveromyces lactis]
          Length = 295

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 43/232 (18%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  IL  + F  + L +      PR ETE      +A  LP   ++   ++LDL +G+G 
Sbjct: 63  LQYILKTQPFGPLDLLVRPGVLIPRWETEEWCMDLIA-KLPEKARQGQFKVLDLCSGSGC 121

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL----- 164
           + LA+      +    VD+S KA+ + K N    G+       +Q+D     E +     
Sbjct: 122 IALAIAHTRTEYIVKSVDLSPKAIALLKDNVRKVGLQNTNVQCIQADILRHSEHIYSKDK 181

Query: 165 FDVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG----------------------- 199
           F++I  NPPYI S   + +C    V+ ++PR++L                          
Sbjct: 182 FNLITCNPPYIPSNNFVKEC-TTSVKLYEPRLALVADLEFYDNLLQYWIPRTESFVYEVG 240

Query: 200 --------IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK--VDVVRIFES 241
                   I+GLSH  +   G+    N    C      N +  +D V+IF+S
Sbjct: 241 DMKQCQHVINGLSHNTSWKTGIKYDSNDKPRCVYGYLANPESTIDYVKIFDS 292


>gi|307700840|ref|ZP_07637865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris FB024-16]
 gi|307613835|gb|EFN93079.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris FB024-16]
          Length = 330

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 101/273 (36%), Gaps = 52/273 (19%)

Query: 34  QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           Q FF   A+V    H   +  ++G   F  ++L      F  RPETE + ++ +  +   
Sbjct: 56  QEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFVVRPETEWVAEAGIETAQVW 112

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--- 149
             +    ++LDLG G+GA+ LA+  E      + VDIS +A+ + + NA   G+  R   
Sbjct: 113 GAQGIPPQVLDLGCGSGALGLAVAAEVADTVLISVDISPEAVALTQENADLCGIKARVIL 172

Query: 150 ---------FDTLQSD----------WFSSVEG-----------------------LFDV 167
                       L +D            ++ EG                        F V
Sbjct: 173 ADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAPHESENNGANETKATPKFHV 232

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+NPPY+   +      E     P+    GG DGL   R   +  ++ L   G   +E 
Sbjct: 233 IVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRRFLENAAKLLVAGGTVVMEH 289

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G  Q   +V           +  KD  G  R L
Sbjct: 290 GETQGEALVVAARDLGFGRAHIEKDLAGRPRFL 322


>gi|300781421|ref|ZP_07091275.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC
           33030]
 gi|300533128|gb|EFK54189.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC
           33030]
          Length = 311

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA--------FSLP 91
            A+ R  KHE + RI+G   F    L +    F PRPETE+L + A+A         S  
Sbjct: 65  EAVSRREKHEPLQRIIGTAPFGIHDLKVGPGVFIPRPETEVLAEWAVAAFAEYLDSLSDD 124

Query: 92  RIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-- 148
            I+  D    ++DLGTG+GA+ + + +       +GV+ S  AL  A++NA  +G     
Sbjct: 125 EIDAPDFQPVVVDLGTGSGALAIYIAQRVDADLVIGVEKSPVALAAARANADEHGGRGAE 184

Query: 149 ----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGL 203
                 D           G   ++V+NPPY+     +   L+   + DP  ++  G DG+
Sbjct: 185 IQIISGDMTDPHLLEEYSGKVGLVVANPPYVPFEPEESGALQPEIYHDPPEAVFSGADGM 244

Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226
              R +    +R L   G   +E
Sbjct: 245 DAIRGLIPVAARLLAPGGKLGIE 267


>gi|306831419|ref|ZP_07464577.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426204|gb|EFM29318.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 197

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     +   VDI+ +A+++A+ NA  NGV+   +  QS+ +  
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VTGTFDYIISNPP 130


>gi|187925511|ref|YP_001897153.1| methyltransferase small [Burkholderia phytofirmans PsJN]
 gi|187716705|gb|ACD17929.1| methyltransferase small [Burkholderia phytofirmans PsJN]
          Length = 374

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 9/125 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD   +  LP + K       D+GTGTG V  ALL +    K V  D   +AL  A+ N 
Sbjct: 185 VDLVASTPLPSLNK-----AFDIGTGTG-VLSALLAKRGVKKIVATDQDPRALACARENL 238

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G  ++ D +Q+D F   EG   ++VSNPP++ +     +   + D + R+ L G ++
Sbjct: 239 TRLGYDQQVDVVQADLFP--EGRAPLVVSNPPWVPARPASPIEYAIYDPESRMLL-GFLN 295

Query: 202 GLSHY 206
           GL+ +
Sbjct: 296 GLAEH 300


>gi|153853634|ref|ZP_01995014.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814]
 gi|149753789|gb|EDM63720.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814]
          Length = 248

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R++K +  + LDLGTGTG + + L  + P     G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLSAFARVKKNE--KALDLGTGTGILPILLEAKYPGLHYTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYI 175
             NG+ ER D +  D    +S+ G   F VI +NPPY+
Sbjct: 90  SYNGLEERIDIVTGDIKEAASIFGAASFGVITTNPPYM 127


>gi|145633431|ref|ZP_01789161.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           3655]
 gi|144985994|gb|EDJ92596.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           3655]
          Length = 330

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  I+ +   ++LDLG G G +   + K +P  +    DI   ALE A+     N +  +
Sbjct: 183 LSTIDNKIKGKVLDLGCGAGVIGSMIKKRAPNAQITMTDIHAMALESARKTLSENQL--Q 240

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            +   SD FS++EG FD+I+SNPP+
Sbjct: 241 GEVYASDVFSNIEGKFDLIISNPPF 265


>gi|288905339|ref|YP_003430561.1| hypothetical protein GALLO_1138 [Streptococcus gallolyticus UCN34]
 gi|325978326|ref|YP_004288042.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732065|emb|CBI13630.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|325178254|emb|CBZ48298.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 197

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     +   VDI+ +A+++A+ NA  NGV+   +  QS+ +  
Sbjct: 61  LLDLGCGYGPLGISLAKVQGV-QATMVDINNRAIDLAQKNAEKNGVTA--NIFQSNIYEK 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VTGTFDYIISNPP 130


>gi|15597375|ref|NP_250869.1| hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
 gi|218891868|ref|YP_002440735.1| putative methylase [Pseudomonas aeruginosa LESB58]
 gi|9948200|gb|AAG05567.1|AE004645_1 hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
 gi|218772094|emb|CAW27873.1| putative methylase [Pseudomonas aeruginosa LESB58]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|150387943|ref|YP_001317992.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
 gi|149947805|gb|ABR46333.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
          Length = 255

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K    R++DLGTGTG + + L  +S      G++I  +  E+A+ + 
Sbjct: 32  IDAVLLANFVTLKKN--ARVVDLGTGTGIIPILLAGKSESSHVTGIEIQEEVAEMAQRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             NG+  R D L  D   + + L    FDV+ SNPPY+
Sbjct: 90  KLNGLECRIDILPMDLKEAPQVLPVNSFDVVTSNPPYM 127


>gi|225621207|ref|YP_002722465.1| methyltransferase small domain-containing protein [Brachyspira
           hyodysenteriae WA1]
 gi|225216027|gb|ACN84761.1| methyltransferase small domain protein [Brachyspira hyodysenteriae
           WA1]
          Length = 213

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++ T +   F P+      +D      +  I   D  +ILDLG G G V +   K     
Sbjct: 13  LKFTSNDKLFSPKN-----IDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKIIGED 67

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPY 174
           K V  DI  +A+EI+K NAV N VS   + +QSD   + ++  F +I+SNPPY
Sbjct: 68  KVVMCDIDAEAVEISKHNAVLNNVS-NINIIQSDGLRNIIDNDFSMILSNPPY 119


>gi|170017869|ref|YP_001728788.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20]
 gi|169804726|gb|ACA83344.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20]
          Length = 213

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLGTG G V +A+ K       + VD++ +ALE+A+ NA  NGV++     QS+ + 
Sbjct: 70  KILDLGTGYGPVGIAIAKAMSRQVDM-VDVNERALELAQQNAQKNGVTQLTRIFQSNIYD 128

Query: 160 SVEGLFDVIVSNPP 173
            +   + +I++NPP
Sbjct: 129 KITDKYALILTNPP 142


>gi|49084994|gb|AAT51244.1| PA2179 [synthetic construct]
          Length = 317

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|50547103|ref|XP_501021.1| YALI0B17534p [Yarrowia lipolytica]
 gi|49646887|emb|CAG83274.1| YALI0B17534p [Yarrowia lipolytica]
          Length = 299

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 26/224 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTG 109
           +  ++G + F ++ +    +   PR ETE      L+  L  + +R+  +R++DL TGTG
Sbjct: 64  LQYVIGNQPFGSLNIDCRKNVLIPRSETEEWA-CHLSNLLKTLARRNKDMRLVDLCTGTG 122

Query: 110 AVCLAL-LKESPFFKGVGVDISCKALEIAKSNAVTNGVS--------ERFDTLQSDWFSS 160
             C+AL +   P     G+D+S  AL +A+ N   N  S        E+ D L     + 
Sbjct: 123 --CIALQMATLPLALVAGIDVSSDALNLAEHNEKLNQTSLRADKVIFEQLDILDPKNDAK 180

Query: 161 VEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  L   I++ NPPY+ S  VD     V+  +P++++ GG +         + ++R  N 
Sbjct: 181 IAALHPTIITANPPYV-SHEVDA-AQAVKKHEPKLAVFGGNE-------FYEAIARITNN 231

Query: 220 DGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            G  ++  E+GY  + +  +    +    +  FKD+    R + 
Sbjct: 232 SGAQALVTEVGYLDQANYTQSLLPKDWSSI-VFKDFSDRPRAVF 274


>gi|307129409|ref|YP_003881425.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii
           3937]
 gi|306526938|gb|ADM96868.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii
           3937]
          Length = 342

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  +E     ++LDL  G G +  +  + SP  +    D+   ALE ++S  
Sbjct: 181 LDTGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAALEASRSTL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
             NG+  +   + S+ +S ++G FD+I+SNPP+ + +       EV
Sbjct: 241 AANGLEGQ--VIASNAYSDIQGRFDLIISNPPFHDGMQTSLHAAEV 284


>gi|226323868|ref|ZP_03799386.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758]
 gi|225207417|gb|EEG89771.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758]
          Length = 166

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 8/147 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL--DDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYN 62
           DS   L  VTG+   +  VD    +  ++  RFF    +V   K    +  + G ++F  
Sbjct: 25  DSWILLEHVTGMIRTRYYVDGFERMPKNEEDRFF---ELVSCRKTRIPVQHLTGVQEFMG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PR +TE+LV+ A    L  ++K + V++LD+ TG+G + ++L   +P  
Sbjct: 82  YEFAVNEHVLVPRQDTEILVEEA-EKRLLLMKKENPVKVLDMCTGSGCIPISLKLRNPQI 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER 149
              G DIS +AL++A+ NA   G SER
Sbjct: 141 VIEGADISEEALKVAEKNAKKAG-SER 166


>gi|256833417|ref|YP_003162144.1| methyltransferase small [Jonesia denitrificans DSM 20603]
 gi|256686948|gb|ACV09841.1| methyltransferase small [Jonesia denitrificans DSM 20603]
          Length = 536

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 13/170 (7%)

Query: 87  AFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +F+L ++  R +V R+LD+GTG G   LA  + +   + +  DIS +A+  A+ NA  N 
Sbjct: 173 SFTLAQVTPRTNVGRVLDIGTGCGVQALAATRHA--RQVMATDISPRAVAFARFNAALN- 229

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                +  +  +F  V G  FD++VSNPP+   VI    G ++  ++ R   DGG  G  
Sbjct: 230 -DSDVEIREGSFFEPVHGETFDLVVSNPPF---VITPRTGTDLALYEYR---DGGAAGDR 282

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
               +   V ++L   G C+V +G  +     R  E  + ++  A   +G
Sbjct: 283 VVAQMVTDVPQYLAAGG-CAVMLGNWEVTAGSRWDEGPRAWIEQARALHG 331


>gi|251793049|ref|YP_003007775.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534442|gb|ACS97688.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           aphrophilus NJ8700]
          Length = 334

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   + K  P  K V  DI   ALE A+     N +  +   L SD FS 
Sbjct: 198 VLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQL--QGTVLASDVFSH 255

Query: 161 VEGLFDVIVSNPPYIESV 178
           VEG FD+I+SNPP+ + +
Sbjct: 256 VEGKFDLIISNPPFHDGI 273


>gi|291299303|ref|YP_003510581.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
 gi|290568523|gb|ADD41488.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
          Length = 378

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 20/146 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +  VD   A  LP     +   + D+GTGTG +   L K     + V  DI+ +A+E
Sbjct: 183 PTRDEYVDLVAAAPLP-----EGATVFDIGTGTGVLAALLAKRG--ARVVATDIAPRAVE 235

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A  N    G+ +R + +++D F    G  DV++ NPP++       L   V D   R+ 
Sbjct: 236 CAADNMTRLGLDDRVEVVEADLFPP--GRADVVLCNPPWLPGTPNSTLDAAVFDHGGRM- 292

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG 221
                  LS +    DGV+ HLN  G
Sbjct: 293 -------LSGF---LDGVAAHLNPGG 308


>gi|158312865|ref|YP_001505373.1| HemK family modification methylase [Frankia sp. EAN1pec]
 gi|158108270|gb|ABW10467.1| modification methylase, HemK family [Frankia sp. EAN1pec]
          Length = 334

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 30/184 (16%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-----LDL 104
            +  + G   F ++ + +    F PRPETE + + A+A     +   D V       +DL
Sbjct: 82  PLQHLTGLAGFRHLDIAVGPGVFIPRPETEWVAEWAIAA----LRSPDAVVAGRPICVDL 137

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-------- 156
             G+GA+ L++  E P  +   V++   AL   + N    G+  R    Q+D        
Sbjct: 138 CAGSGAIALSVADEVPNAEVHAVELEPAALGWLRRNVERTGLPVRVH--QADVGIPRSPT 195

Query: 157 -----------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                        + + G  DV++SNPPY+       +  EV   DP  +L GG DGL  
Sbjct: 196 DAGRPVAPVGTVLTDLAGRADVVISNPPYLPDHERPRVEPEVGRHDPPAALWGGPDGLDG 255

Query: 206 YRTI 209
            R +
Sbjct: 256 PRAV 259


>gi|116050122|ref|YP_791063.1| hypothetical protein PA14_36390 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585343|gb|ABJ11358.1| putative methylase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|313110982|ref|ZP_07796822.1| putative methylase [Pseudomonas aeruginosa 39016]
 gi|310883324|gb|EFQ41918.1| putative methylase [Pseudomonas aeruginosa 39016]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|226228550|ref|YP_002762656.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226091741|dbj|BAH40186.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 546

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+L +GTG   L   K         VDI+ +    A  NA  N + E   +LQ D ++
Sbjct: 196 RVLELCSGTGVATLMAAKAG-ATHAWAVDITERCTHFAAFNARLNDL-EHVTSLQGDLYA 253

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +EG  FD IV++PPYI S   +            I  DGG DG    R I   +  +L 
Sbjct: 254 PLEGQQFDCIVAHPPYIPSTSTEI-----------IYRDGGEDGEQITRAIIGKLPEYLA 302

Query: 219 KDGL--CSVEI 227
            DG+  C+ +I
Sbjct: 303 LDGIFHCTCQI 313


>gi|325687971|gb|EGD29991.1| methyltransferase domain protein [Streptococcus sanguinis SK72]
 gi|327469474|gb|EGF14943.1| methyltransferase domain protein [Streptococcus sanguinis SK330]
          Length = 195

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L K +       +DI+ +AL++A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLTLAK-AQGVAATMLDINQRALDLAQKNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVNGIFDHIISNPP 130


>gi|319946685|ref|ZP_08020919.1| methyltransferase domain protein [Streptococcus australis ATCC
           700641]
 gi|319746733|gb|EFV98992.1| methyltransferase domain protein [Streptococcus australis ATCC
           700641]
          Length = 197

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K       + VD++ +AL++A+ NA  N V  +    QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLVKAQGIHATM-VDVNTRALDLAQKNADLNQVEAKI--FQSNVYDQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD I+SNPP
Sbjct: 118 VEGSFDHIISNPP 130


>gi|229067866|ref|ZP_04201183.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185]
 gi|229176701|ref|ZP_04304105.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W]
 gi|228606744|gb|EEK64161.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W]
 gi|228715225|gb|EEL67084.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185]
          Length = 213

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|311744554|ref|ZP_07718354.1| methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311312173|gb|EFQ82090.1| methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 488

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 14/141 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V R LDLGTG G   L L + +   + V  D++ +AL +A+  A  NGV+   D  +
Sbjct: 151 RTPVARALDLGTGCGVQALHLAQHA--DRVVATDVNPRALAMAELTASLNGVT--VDVRR 206

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD++ +NPP++ S           D D  +  + G +G    R I  G 
Sbjct: 207 GSLFEPVATERFDLVATNPPFVVSP---------PDGDRLVYRETGFEGDEVVRRIVQGA 257

Query: 214 SRHLNKDGLCSVEIGYNQKVD 234
             HL + G C V   +    D
Sbjct: 258 PDHLTEHGWCQVLASWIHPAD 278


>gi|289177356|gb|ADC84602.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium animalis
           subsp. lactis BB-12]
          Length = 255

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G GA+ LAL  ESP      VD++ +A+E+A+SNA  NG       + +   + V
Sbjct: 116 LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 171

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 172 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 208


>gi|183602406|ref|ZP_02963772.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|241191240|ref|YP_002968634.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196646|ref|YP_002970201.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218325|gb|EDT88970.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|240249632|gb|ACS46572.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251200|gb|ACS48139.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794233|gb|ADG33768.1| hypothetical protein BalV_1180 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 209

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G GA+ LAL  ESP      VD++ +A+E+A+SNA  NG       + +   + V
Sbjct: 70  LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 125

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 126 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 162


>gi|296389401|ref|ZP_06878876.1| hypothetical protein PaerPAb_14676 [Pseudomonas aeruginosa PAb1]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|107101605|ref|ZP_01365523.1| hypothetical protein PaerPA_01002649 [Pseudomonas aeruginosa PACS2]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|254235205|ref|ZP_04928528.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
 gi|126167136|gb|EAZ52647.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
          Length = 316

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 8/113 (7%)

Query: 66  TLSSDTFEPRPET---ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           TL++D     P+T   + L+ S LA S P      + R  D+G G G   + +    P  
Sbjct: 106 TLAADAVFFGPDTYRFDRLIRSHLASSDPA----RIRRAADIGCGAGPGAIRIAMACPDA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+
Sbjct: 162 EVHGLDINPAALDLARVNAALAGVGN-LTLARSDLLSQAPGRFDLIVANPPYL 213


>gi|309808054|ref|ZP_07701972.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|308168656|gb|EFO70756.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
          Length = 223

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F    + +   
Sbjct: 27  LAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGYSIDVHPG 86

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----- 125
              PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++   K +     
Sbjct: 87  VLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAE-CKNINNIVY 139

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI+  AL  ++ N +   +++   T ++D    +E  FD+I+SNPPYI++   D + 
Sbjct: 140 YASDITDSALRQSEENFLKFNLNDII-TRKADALIGLEK-FDLIISNPPYIKNSEKDLMD 197

Query: 185 LEVRDFDPRISL 196
             V   +P  +L
Sbjct: 198 QNVIKNEPEEAL 209


>gi|219683279|ref|YP_002469662.1| 16S RNA G1207 methylase RsmC precursor [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|219620929|gb|ACL29086.1| putative 16S RNA G1207 methylase RsmC precursor [Bifidobacterium
           animalis subsp. lactis AD011]
          Length = 231

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G GA+ LAL  ESP      VD++ +A+E+A+SNA  NG       + +   + V
Sbjct: 92  LDLGCGWGAIALALALESPEATVYAVDVNERAIELARSNAEANGCG----NIHAGTAAVV 147

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 148 PGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 184


>gi|229188386|ref|ZP_04315434.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
 gi|228595060|gb|EEK52831.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
          Length = 213

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|75763956|ref|ZP_00743584.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74488558|gb|EAO52146.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 213

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|227875210|ref|ZP_03993352.1| possible polypeptide chain release factor methyltransferase
           [Mobiluncus mulieris ATCC 35243]
 gi|227844115|gb|EEJ54282.1| possible polypeptide chain release factor methyltransferase
           [Mobiluncus mulieris ATCC 35243]
          Length = 330

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 108/292 (36%), Gaps = 58/292 (19%)

Query: 21  QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73
           Q +++   + D+R      Q FF   A+V    H   +  ++G   F  ++L      F 
Sbjct: 37  QHVLEHPPLYDERLDAAKYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E        VDIS +A
Sbjct: 94  VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153

Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163
           + + + NA   G+  R               L +D            ++ EG        
Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213

Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                           F VIV+NPPY+   +      E     P+    GG DGL   R 
Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +  ++ L   G   +E G  Q   +V           +  KD  G  R L
Sbjct: 271 FLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHTEKDLAGRPRFL 322


>gi|228898854|ref|ZP_04063136.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
           4222]
 gi|228860754|gb|EEN05132.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
           4222]
          Length = 199

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I K D   ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 46  SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 96  GLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|206972250|ref|ZP_03233197.1| ybxB protein [Bacillus cereus AH1134]
 gi|228950649|ref|ZP_04112783.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077398|ref|ZP_04210055.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2]
 gi|206732824|gb|EDZ49999.1| ybxB protein [Bacillus cereus AH1134]
 gi|228705911|gb|EEL58240.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2]
 gi|228809000|gb|EEM55485.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 199

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 50/87 (57%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K D   ILD+G G G + L+L KE    +   VD++ +AL +AK NA  N +
Sbjct: 52  AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E     QS  + +V+G +  I+SNPP
Sbjct: 108 -ENIRIFQSSVYENVDGKYAAILSNPP 133


>gi|313884753|ref|ZP_07818508.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620014|gb|EFR31448.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 203

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ILDLG G GA+ +AL K  P    VGV+++ +AL +A++N   N V E    LQ+D  S 
Sbjct: 63  ILDLGAGYGAMTIALAKLYPQAHLVGVELNERALNLAQTNQDLNRV-ESISWLQADATSI 121

Query: 160 SVEGLFDVIVSNPP 173
           +++ +FD +++NPP
Sbjct: 122 NLDVMFDFVITNPP 135


>gi|239636940|ref|ZP_04677938.1| methyltransferase small domain protein [Staphylococcus warneri
           L37603]
 gi|239597488|gb|EEQ79987.1| methyltransferase small domain protein [Staphylococcus warneri
           L37603]
          Length = 202

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ S L  + P   K     I D+G G G + L + K SP  +   +D++ +ALE+A
Sbjct: 45  SDLLIQSFLKANPPGPSKT----IADVGCGYGPIGLMIAKVSPHHQITMLDVNRRALELA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           K N   N + E  D  +SD  + V +  FD +++NPP
Sbjct: 101 KKNKKKNHI-ENADIFESDGMTQVDDNQFDFVLTNPP 136


>gi|332360926|gb|EGJ38731.1| methyltransferase domain protein [Streptococcus sanguinis SK355]
          Length = 195

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L+L K +       VDI+ +AL++A+ NA  N +S      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLSLAK-AYGVAATMVDINQRALDLAQKNAERNQISAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD ++SNPP
Sbjct: 117 KVSGIFDHVISNPP 130


>gi|328946007|gb|EGG40153.1| methyltransferase domain protein [Streptococcus sanguinis SK1087]
          Length = 195

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L+L K +       VDI+ +AL +A+ NA  N VS      QS+ + 
Sbjct: 60  RVLDVGCGYGPLGLSLAK-AYGVAATMVDINQRALGLAQQNAERNQVSAHI--FQSNVYE 116

Query: 160 SVEGLFDVIVSNPP 173
            V G+FD I+SNPP
Sbjct: 117 KVSGIFDHIISNPP 130


>gi|219851215|ref|YP_002465647.1| methylase [Methanosphaerula palustris E1-9c]
 gi|219545474|gb|ACL15924.1| methylase [Methanosphaerula palustris E1-9c]
          Length = 188

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 29/203 (14%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L+   ++P  +T LL   A + ++P        R+L++GTG+G V  AL         
Sbjct: 7   LFLNDQVYQPEADTLLLCRVACSTAMPDD------RVLEVGTGSGYVAAALKDCCTV--- 57

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG+DI+  A+  AK+  V        + ++SD  +   G FD+I+ NPPY+ +     L 
Sbjct: 58  VGLDINPHAVMAAKARGV--------EVVRSDLCAGFRGPFDLILFNPPYLPT-----LP 104

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVRIFE 240
            E  D     +LDGG+ G       A  V R L  +G    L S   GY++   V  IF 
Sbjct: 105 EERIDDWLEYALDGGLTGRDVIARFAAEVGRVLAPEGRILLLISSLTGYDE---VAAIFT 161

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                ++ A  +   ++ + + C
Sbjct: 162 GLGFQIIRAADEQVCDELLSVLC 184


>gi|251799654|ref|YP_003014385.1| methyltransferase small [Paenibacillus sp. JDR-2]
 gi|247547280|gb|ACT04299.1| methyltransferase small [Paenibacillus sp. JDR-2]
          Length = 201

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LD+G G G + L   K +P      +DI+ +A+E++K NA  NGVS     +QSD +
Sbjct: 59  AQVLDVGCGYGPIGLTAAKLAPEGHVTMIDINERAVELSKENAKLNGVS-NVTIVQSDIY 117

Query: 159 SSVE-GLFDVIVSNPP 173
            SV+   +DVI++NPP
Sbjct: 118 ESVKNNRYDVILTNPP 133


>gi|320101338|ref|YP_004176930.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM
           2162]
 gi|319753690|gb|ADV65448.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM
           2162]
          Length = 193

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   +FE    T L     +D      L  I   +   +LD+G G G + + + + 
Sbjct: 16  IPLTIHGQSFEFLSYTSLFSGSSIDEGTRLLLENIVIPEEGVVLDIGCGYGVIGIVVARL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173
           +P  K    D++  A++ A+ NA  NGV +R   ++ D +  VEGL F+ I SNPP
Sbjct: 76  NPRLKVYMTDVNPLAVKTARFNARRNGVGDRVVVVEGDGYRPVEGLVFNAIYSNPP 131


>gi|167856203|ref|ZP_02478939.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755]
 gi|167852658|gb|EDS23936.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755]
          Length = 235

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
            ILDLGTGTG + + L + +   +   +++   A   A+ NA     + R D LQ++   
Sbjct: 38  HILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQHCPWNNRIDVLQANIMT 97

Query: 157 WFSSVEGLFDVIVSNPPYIE 176
           W S+ +  FD+IVSNPPY E
Sbjct: 98  WKSTKK--FDLIVSNPPYFE 115


>gi|58265656|ref|XP_569984.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134108951|ref|XP_776590.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259270|gb|EAL21943.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226216|gb|AAW42677.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 362

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 103/248 (41%), Gaps = 28/248 (11%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--- 98
           + R    E +  ILG   F  + +        PRPET  +     +  L  +        
Sbjct: 112 VKRRSAGEPLQYILGSAGFGPINIRCQKPVLIPRPETAHIFTRLSSTILSSVSSLTSSSR 171

Query: 99  ----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               + +LD+ TGT  + L L   +P    VG+D S  A+ +  +NA   G+  R     
Sbjct: 172 PSAHLPVLDICTGTACIPLLLAHLNPLLTAVGIDNSPAAVSLGGANAKILGMEGRVKVRY 231

Query: 155 SDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG----IDGLS 204
            + F+        EG   ++VSNPPYI     + L   V+D++   +L G      +GL+
Sbjct: 232 GNVFAESTRLLGREGKVGLVVSNPPYIPFKEWEQLPKSVKDWESPAALLGDGKNYGEGLA 291

Query: 205 HYRTIADGVSRHLNKDG-----------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            Y  IA+ +   L ++G             +VE+G  Q   V  IF   ++     ++D 
Sbjct: 292 FYERIAEMLPDLLLEEGEMEKKGWKGVPRVAVEVGLGQARKVEEIFRCGQINNTEVWQDQ 351

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 352 FGIERMVV 359


>gi|311739607|ref|ZP_07713442.1| transferase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305423|gb|EFQ81491.1| transferase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 523

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L       V  +LDLGTG+G   L  L  +   K    D+  +A
Sbjct: 140 PGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--KITATDVHERA 197

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           L++A++     G S++ + LQ  WF  V G  FD +V+NPP++
Sbjct: 198 LKLAEATIAATGDSDKVELLQGSWFDPVAGRRFDRLVANPPFV 240


>gi|304385471|ref|ZP_07367816.1| methyltransferase domain protein [Pediococcus acidilactici DSM
           20284]
 gi|304328678|gb|EFL95899.1| methyltransferase domain protein [Pediococcus acidilactici DSM
           20284]
          Length = 201

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + +AL K+ P  +    D++ +AL +A+ NA  NGV+ R     SD + +
Sbjct: 62  ILDVGCGYGPMGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSDAYEA 121

Query: 161 VEGL-FDVIVSNPP 173
           V    F  +VSNPP
Sbjct: 122 VAKTDFTTVVSNPP 135


>gi|210623265|ref|ZP_03293682.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275]
 gi|210153666|gb|EEA84672.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275]
          Length = 251

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  R+  ++  R+ DLGTGTG + L +  ++   K  GV+I  +  E+A     
Sbjct: 33  DAVLLANFARV--KNGARVADLGTGTGIIPLIIYGKNNVEKIYGVEIQEEVFEMASRTVK 90

Query: 143 TNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            N + ++ + + +D     E L    FDV+ SNPPY+ S
Sbjct: 91  MNEIEDKIEIVNADLKEIKEVLPQNTFDVVTSNPPYMHS 129


>gi|198274619|ref|ZP_03207151.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
 gi|198272066|gb|EDY96335.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
          Length = 238

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG+G + L L + +P      VDI    +E A+ N      S+R +  + D   
Sbjct: 40  RMLDIGTGSGLIALMLAQRNPDAFVTAVDIDEAVVEQARENVARTPWSDRMEVERLDIRK 99

Query: 160 SVE---GLFDVIVSNPPY-IESV 178
           + E   G FD IVSNPPY +ESV
Sbjct: 100 APEEWNGCFDAIVSNPPYFVESV 122


>gi|270291186|ref|ZP_06197409.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
 gi|270280582|gb|EFA26417.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
          Length = 201

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + +AL K+ P  +    D++ +AL +A+ NA  NGV+ R     SD + +
Sbjct: 62  ILDVGCGYGPMGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSDAYEA 121

Query: 161 VEGL-FDVIVSNPP 173
           V    F  +VSNPP
Sbjct: 122 VAKTDFTTVVSNPP 135


>gi|170728465|ref|YP_001762491.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|226712994|sp|B1KHR8|RSMC_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169813812|gb|ACA88396.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 345

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR+ +R    +LD G G G +  ALLK  P  +   VDI+  AL+  +     N  + +
Sbjct: 199 LPRLSRR----VLDFGCGAGVIAAALLKAQPELEIECVDINAMALKSCELTLEANNFTAK 254

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
                SD  S  +G FD I+SNPP+
Sbjct: 255 --VYASDGLSQTQGHFDDIISNPPF 277


>gi|154249952|ref|YP_001410777.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
 gi|154153888|gb|ABS61120.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
          Length = 206

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + + L KE+P  +    D++ +A+E AK NA  N +  + D  Q + + 
Sbjct: 66  KVLDIGCGYGVIGITLKKENPSIELFMSDVNKRAVEFAKINAKDNNI--QADIRQGNLYE 123

Query: 160 SVEG-LFDVIVSNPPYI 175
             EG LFD I+SNPP +
Sbjct: 124 PWEGYLFDHIISNPPIV 140


>gi|228989310|ref|ZP_04149301.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
           12442]
 gi|228770388|gb|EEM18961.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
           12442]
          Length = 213

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K DV   LD+G G G + L+L KE        VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N V E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKV-ENVRIFQSSVYENVDGKYAAILSNPP 147


>gi|145636784|ref|ZP_01792450.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|148825706|ref|YP_001290459.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|229846931|ref|ZP_04467037.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|226712955|sp|A5UBC5|RSMC_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145270082|gb|EDK10019.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|148715866|gb|ABQ98076.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|229810015|gb|EEP45735.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           7P49H1]
          Length = 330

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   ++LDLG G G +   + K  P  +    DI   ALE A+   
Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIKKRVPNAQITMTDIHAMALESARKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +  +     SD FS +EG FD+I+SNPP+ + +
Sbjct: 235 SENQLQGK--VYASDVFSDIEGKFDLIISNPPFHDGI 269


>gi|229003116|ref|ZP_04160963.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4]
 gi|228758131|gb|EEM07329.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4]
          Length = 199

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K DV   LD+G G G + L+L KE        VD++ +AL +AK NA  N V
Sbjct: 52  AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLAKENAANNKV 107

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E     QS  + +V+G +  I+SNPP
Sbjct: 108 -ENVRIFQSSVYENVDGKYAAILSNPP 133


>gi|326937895|gb|AEA13791.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 199

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143
           AF +P I K D   ILD+G G G + L+L KE   F+G  V   D++ +AL +AK NA  
Sbjct: 52  AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCEVHMVDVNERALGLAKENAAN 104

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           N + E     QS  + +V+G +  I+SNPP
Sbjct: 105 NRI-ENIRIFQSSVYENVDGEYAAILSNPP 133


>gi|229015503|ref|ZP_04172501.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
 gi|229021712|ref|ZP_04178294.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
 gi|228739580|gb|EEL89994.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
 gi|228745790|gb|EEL95794.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
          Length = 213

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I K D   ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDI-KGD---ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNRI-ENIRIFQSSVYENVDGKYAAILSNPP 147


>gi|228995491|ref|ZP_04155159.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17]
 gi|228764220|gb|EEM13099.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17]
          Length = 213

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I K DV   LD+G G G + L+L KE        VD++ +AL +AK NA  N V
Sbjct: 66  AFQMPDI-KGDV---LDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLAKENAANNKV 121

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E     QS  + +V+G +  I+SNPP
Sbjct: 122 -ENVRIFQSSVYENVDGKYAAILSNPP 147


>gi|332160199|ref|YP_004296776.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318607236|emb|CBY28734.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664429|gb|ADZ41073.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860113|emb|CBX70437.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica W22703]
          Length = 347

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|228937403|ref|ZP_04100049.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970289|ref|ZP_04130948.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976859|ref|ZP_04137271.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
 gi|228782829|gb|EEM30995.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
 gi|228789398|gb|EEM37318.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822236|gb|EEM68218.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 213

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 11/90 (12%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVT 143
           AF +P I K D   ILD+G G G + L+L KE   F+G  V   D++ +AL +AK NA  
Sbjct: 66  AFQMPDI-KGD---ILDVGCGYGPIGLSLAKE---FQGCEVHMVDVNERALGLAKENAAN 118

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           N + E     QS  + +V+G +  I+SNPP
Sbjct: 119 NRI-ENIRIFQSSVYENVDGEYAAILSNPP 147


>gi|220927621|ref|YP_002504530.1| methyltransferase type 11 [Clostridium cellulolyticum H10]
 gi|219997949|gb|ACL74550.1| Methyltransferase type 11 [Clostridium cellulolyticum H10]
          Length = 260

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 8/81 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ++LD+GTG+G + + L  ++   K VG++I  +  E+A  + + N +S+R + +Q D   
Sbjct: 53  KVLDIGTGSGIIPVLLAGKTKAAKIVGIEIQEEMAEMASRSVLMNRLSDRLEIVQGDIKL 112

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              +F      FDV+VSNPPY
Sbjct: 113 YREYFRKSS--FDVVVSNPPY 131


>gi|332140923|ref|YP_004426661.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550945|gb|AEA97663.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 162

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   PD  L   Q     +AI R    E +  I+G RDF+ + L
Sbjct: 23  DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPF 121
             SS T  PRP+TE+LV+  + ++   +      +  + I DLGT      L  +  SPF
Sbjct: 83  FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGT-----VLPFIVTSPF 137


>gi|83589437|ref|YP_429446.1| 50S ribosomal protein L11P methyltransferase [Moorella
           thermoacetica ATCC 39073]
 gi|123524952|sp|Q2RKY6|PRMA_MOOTA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|83572351|gb|ABC18903.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 318

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 29/140 (20%)

Query: 56  GWRDFYN-VRLT------LSSDTFEPRP-ETELLVDSALAF----------SLPRIEK-- 95
           GW+ +Y+ VR+T       + + + P P ET + +D  +AF          SL  +E+  
Sbjct: 113 GWQKYYHPVRVTKGLTIKPTWEEYTPSPGETVIEIDPGMAFGTGTHPTTILSLQALERVL 172

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFD 151
           +   R++D+G GTG + LA  K      G G    +D+   A+ +A+ N   NG +++  
Sbjct: 173 KPGARVVDVGCGTGILALAAAK-----MGAGAVLALDLDPVAVAVARKNIARNGAADKVT 227

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
              +D  + +EG FD++V+N
Sbjct: 228 VRNNDLLAGLEGPFDLVVAN 247


>gi|329116075|ref|ZP_08244792.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
 gi|326906480|gb|EGE53394.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
          Length = 199

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G + ++L K         VDI+ +A+++++ NA  NGV+      QS+ + 
Sbjct: 60  KVLDLGCGYGPLGISLAKVQKV-DATMVDINNRAIDLSQKNAERNGVTATIK--QSNIYG 116

Query: 160 SVEGLFDVIVSNPP 173
           +V+G FD I+SNPP
Sbjct: 117 NVQGTFDHIISNPP 130


>gi|123440930|ref|YP_001004921.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|226723586|sp|A1JJ89|RSMC_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|122087891|emb|CAL10679.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 347

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|207722022|ref|YP_002252460.1| hypothetical protein 1177; methyltransferase small [Ralstonia
           solanacearum MolK2]
 gi|206587196|emb|CAQ17780.1| conserved hypothetical protein 1177; methyltransferase small
           [Ralstonia solanacearum MolK2]
          Length = 406

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + VG D   +AL  A+ N    G+  R + +++D F   E
Sbjct: 233 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALVCARENLACLGLQSRVEVIEADLFP--E 289

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 290 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 332


>gi|238798253|ref|ZP_04641738.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           mollaretii ATCC 43969]
 gi|238717891|gb|EEQ09722.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           mollaretii ATCC 43969]
          Length = 347

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|227504902|ref|ZP_03934951.1| methyltransferase small [Corynebacterium striatum ATCC 6940]
 gi|227198495|gb|EEI78543.1| methyltransferase small [Corynebacterium striatum ATCC 6940]
          Length = 553

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P   L V +A    L       V   LDLGTG+G   L  L  +        D+  +A
Sbjct: 140 PGPGHVLGVGAASLSLLQSTPLTPVESALDLGTGSGVQLLGQLSTAEHV--TATDLHERA 197

Query: 134 LEIAKSNAVTNG--VSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
           LE+A++     G   S++ + LQ  WF  V G+ FD IV+NPP++
Sbjct: 198 LELARATIAAAGTDASDKVELLQGSWFEPVAGMSFDRIVANPPFV 242


>gi|210617097|ref|ZP_03291407.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787]
 gi|210149486|gb|EEA80495.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787]
          Length = 246

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R+++++    LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLANFARVKQKECA--LDLGTGTGIIPILLTAKTEGMHFTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
             N + E+ D +  D   + E      FDVI +NPPY+
Sbjct: 90  AHNHLEEKVDIVTGDIKEAAELFGPASFDVITTNPPYM 127


>gi|298243473|ref|ZP_06967280.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
           DSM 44963]
 gi|297556527|gb|EFH90391.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
           DSM 44963]
          Length = 306

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 25/140 (17%)

Query: 56  GWRDFYNV-----RLTL--SSDTFEPRPETELL-VDSALAFS----------LPRIEKRD 97
            W+++Y+V     RL +  S   + P+PE  +L +D  +AF           L ++EKR 
Sbjct: 103 AWKEYYHVTLIGERLVIRPSWREYTPKPEEVVLTLDPGMAFGTGLHPTTRMCLEQLEKRV 162

Query: 98  V--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151
              +RILD+GTG+G + +A  K    F    +D S  A E A  NA  N ++ER      
Sbjct: 163 TPGMRILDVGTGSGILAIAAAKLGAEFIH-AIDNSSVATESASENAALNELAERVKVELG 221

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
            L  +    ++G +D++V+N
Sbjct: 222 ELTPESAGQMKGQYDIVVAN 241


>gi|156935522|ref|YP_001439438.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter sakazakii
           ATCC BAA-894]
 gi|226712952|sp|A7MGA7|RSMC_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|156533776|gb|ABU78602.1| hypothetical protein ESA_03381 [Cronobacter sakazakii ATCC BAA-894]
          Length = 342

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D+S  A+E +++    NG     + + S+ FS
Sbjct: 199 KVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--EVVASNVFS 256

Query: 160 SVEGLFDVIVSNPPY 174
            ++G FD+I+SNPP+
Sbjct: 257 EIKGRFDMIISNPPF 271


>gi|254572519|ref|XP_002493369.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033167|emb|CAY71190.1| hypothetical protein PAS_chr3_1257 [Pichia pastoris GS115]
 gi|328352616|emb|CCA39014.1| hypothetical protein PP7435_Chr3-0040 [Pichia pastoris CBS 7435]
          Length = 292

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 11/155 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  ILG + F +V +        PR +TE      +          D   +LD+ TG+G 
Sbjct: 58  LQYILGNQPFGSVNIKCRPGVLIPRNDTEEWCSELVDV----FRGSDTFSVLDMCTGSGC 113

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEG--LFD 166
           + L L  E      +G DIS   + +A  N   N   +  +      D F  + G   FD
Sbjct: 114 IALYLATELSNVTVLGGDISQDCISLANENIDVNKDIIKGKIKVDSMDLFQPLAGDKKFD 173

Query: 167 VIVSNPPYIESVIVDC---LGLEVRDFDPRISLDG 198
           V+VSNPPYI +  ++    +   VR ++PR++L+G
Sbjct: 174 VVVSNPPYIPTHELEKQEEVEKSVRLYEPRLALEG 208


>gi|269978101|ref|ZP_06185051.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris 28-1]
 gi|269933610|gb|EEZ90194.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris 28-1]
          Length = 330

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 108/292 (36%), Gaps = 58/292 (19%)

Query: 21  QVIVDPDSVLDDR------QRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFE 73
           Q +++   + D+R      Q FF   A+V    H   +  ++G   F  ++L      F 
Sbjct: 37  QHVLEHPPLYDERLDAAQYQEFF---ALVGQRAHRVPLQHVMGEMYFRGLKLRARPGVFV 93

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E        VDIS +A
Sbjct: 94  VRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVADTVLTSVDISPEA 153

Query: 134 LEIAKSNAVTNGVSER------------FDTLQSD----------WFSSVEG-------- 163
           + + + NA   G+  R               L +D            ++ EG        
Sbjct: 154 VALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAAATEGECQTEAAP 213

Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                           F VIV+NPPY+   +      E     P+    GG DGL   R 
Sbjct: 214 HESENNGANETKATPKFHVIVTNPPYVIETVTQP---EAAADPPQALYGGGTDGLDIPRR 270

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +  ++ L   G   +E G  Q   +V           +  KD  G  R L
Sbjct: 271 FLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHIEKDLAGRPRFL 322


>gi|255009352|ref|ZP_05281478.1| hypothetical protein Bfra3_09443 [Bacteroides fragilis 3_1_12]
 gi|313147109|ref|ZP_07809302.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135876|gb|EFR53236.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 237

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 22/179 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  VRILD+GTGTG V L L + S       ++I   A   A  N   +    R + +Q 
Sbjct: 36  KSSVRILDIGTGTGLVALMLAQRST-ASITALEIDEAAAAQATENINRSPWKNRIEVIQQ 94

Query: 156 DW--FSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D+  +SS  G+  FD IVSNPPY  +         ++  D + +     D L+ Y  +  
Sbjct: 95  DFKHYSSKNGISKFDTIVSNPPYFNA--------SLKCSDEQRNKARHNDSLT-YEELLA 145

Query: 212 GVSRHLNKDGLCSV----EIGYNQKVDVVR--IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           GVS  L+++G  ++    ++G   K    +  ++ SR+LF++   K  G   R L+  R
Sbjct: 146 GVSGLLSQEGAFTIVIPMDVGEQIKTLAHKYGLYPSRQLFIIT--KPGGTPKRTLISFR 202


>gi|197121242|ref|YP_002133193.1| methyltransferase small [Anaeromyxobacter sp. K]
 gi|196171091|gb|ACG72064.1| methyltransferase small [Anaeromyxobacter sp. K]
          Length = 382

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R  D+GTGTG + + L +     + +  D+  +A+  A+ NA   G++ + + +++D
Sbjct: 204 DGQRAFDVGTGTGVLAMVLARAG--ARVIATDLEPRAVACARENAARLGLAGQVEVVEAD 261

Query: 157 WFSSVEGLFDVIVSNPPYI 175
            F   EGL DV+V NPP+I
Sbjct: 262 LFP--EGLADVVVCNPPWI 278


>gi|167769486|ref|ZP_02441539.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM
           17241]
 gi|167668454|gb|EDS12584.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM
           17241]
          Length = 306

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 27/139 (19%)

Query: 56  GWRDFY-----NVRLTL--SSDTFEPRP-ETELLVDSALAFSLPRIEKRDV--------- 98
            W+ +Y       RL +  S +++ P P ET L +D  +AF     E   +         
Sbjct: 108 AWKKYYFPTKIGERLVICPSWESYAPAPGETVLTMDPGMAFGTGTHETTRLCIQLLEEAV 167

Query: 99  ---VRILDLGTGTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
              + +LD+GTG+G + +A L     F     VGVDI   A+ +A+ NA  NGV  R   
Sbjct: 168 TPGMDLLDIGTGSGILAIAAL----LFGARAAVGVDIDEVAVRVARENAKANGVGGRARF 223

Query: 153 LQSDWFSSVEGLFDVIVSN 171
           +  D  + V+G+F V+ +N
Sbjct: 224 IAGDLAAKVDGVFPVVTAN 242


>gi|228475259|ref|ZP_04059984.1| methyltransferase small domain protein [Staphylococcus hominis
           SK119]
 gi|314937154|ref|ZP_07844501.1| YbxB protein [Staphylococcus hominis subsp. hominis C80]
 gi|228270724|gb|EEK12133.1| methyltransferase small domain protein [Staphylococcus hominis
           SK119]
 gi|313655773|gb|EFS19518.1| YbxB protein [Staphylococcus hominis subsp. hominis C80]
          Length = 202

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LLV + L    P   KR    I+D+G G G + L + K SP  +   VD++ +AL +A
Sbjct: 45  SDLLVQTFLNEHPPGPSKR----IIDVGCGYGPIGLMIAKVSPHHQMTMVDVNHRALHLA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           + N   N +     T +SD  S VE   FD +++NPP
Sbjct: 101 EKNKKQNQIDNVIIT-ESDGLSQVENEYFDFVLTNPP 136


>gi|255718321|ref|XP_002555441.1| KLTH0G09416p [Lachancea thermotolerans]
 gi|238936825|emb|CAR25004.1| KLTH0G09416p [Lachancea thermotolerans]
          Length = 293

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H  +  +LG + F  + +T       PR ETE    S LA  LPR    D   I+DL T
Sbjct: 58  RHYPLQYLLGSQPFGPLDVTCQPGVLIPRWETEEWTVS-LAEKLPRDMAFD---IMDLCT 113

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEG 163
           GTG + L L +  P      VD S  A ++A  N+ T  V  +    D L+      V  
Sbjct: 114 GTGCIPLLLKQMCPKCSVFAVDRSPLAYKLATRNSNTLQVPLKIIKKDILERS-SEIVPR 172

Query: 164 LFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG 199
             D+I  NPPYI  +         V+ F+P+++L G 
Sbjct: 173 TVDLITCNPPYIPRTTFARETARSVKLFEPKLALLGN 209


>gi|332304707|ref|YP_004432558.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172036|gb|AEE21290.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 248

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFD----TLQ 154
           + LD+GTG+G + + L ++SP    + G+DI   A+  AK N   +  SE+ D    +LQ
Sbjct: 46  QFLDIGTGSGLLAIMLAQKSPAHTCITGIDIDSDAIGQAKRNMANSPWSEKLDAQQTSLQ 105

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIV 180
           S     V+  + +I+SNPPY  S I+
Sbjct: 106 SFHKREVDQKYRLIISNPPYFNSPIL 131


>gi|304415329|ref|ZP_07396010.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1]
 gi|304282816|gb|EFL91298.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1]
          Length = 250

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 2/81 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  GTG +   L   SP  K    D+S  ALE +++    N +    + + S+ +S
Sbjct: 102 KVLDIACGTGVLACVLAHHSPQIKLTLSDVSAAALEASRATLAINNIDA--EVIASNLYS 159

Query: 160 SVEGLFDVIVSNPPYIESVIV 180
            ++G FD+I++NPP+ + + +
Sbjct: 160 DIKGRFDLIMANPPFHDGLAI 180


>gi|238782738|ref|ZP_04626768.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           bercovieri ATCC 43970]
 gi|238716398|gb|EEQ08380.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           bercovieri ATCC 43970]
          Length = 347

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|325954701|ref|YP_004238361.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922]
 gi|323437319|gb|ADX67783.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922]
          Length = 237

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  +ILD+GTGTG + L L + +P      V+I   A + A+ N   +   ER   + +D
Sbjct: 39  DAKKILDVGTGTGLIALMLAQRNPTAMIDAVEIDASAYKQAERNVQESKFHERVSVIFND 98

Query: 157 WFS-SVEGLFDVIVSNPPYIE 176
           + + S    +D IVSNPPY E
Sbjct: 99  FSAFSPNQKYDCIVSNPPYFE 119


>gi|256273272|gb|EEU08213.1| Mtq1p [Saccharomyces cerevisiae JAY291]
          Length = 314

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGID 201
           S          D++  NPPYI     +  +   V+ F+PR++L G ++
Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRNVKTSVKLFEPRLALVGELE 219


>gi|51594923|ref|YP_069114.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186893923|ref|YP_001871035.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|81640466|sp|Q66EW9|RSMC_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725328|sp|B2K3H9|RSMC_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|51588205|emb|CAH19812.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           pseudotuberculosis IP 32953]
 gi|186696949|gb|ACC87578.1| Methyltransferase small domain protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 347

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|256384417|gb|ACU78987.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385249|gb|ACU79818.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455741|gb|ADH21976.1| methyltransferase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 240

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +I D GT    + L L K +   K +GV+I  KA+EIAK N   NG+ E+ + + +D   
Sbjct: 43  KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVEIAKQNIKLNGLEEQIEIIHADIKE 101

Query: 158 FSSVEGL-FDVIVSNPPYIE 176
           FS +    FD++V NPP+ +
Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121


>gi|224024952|ref|ZP_03643318.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM
           18228]
 gi|224018188|gb|EEF76186.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM
           18228]
          Length = 237

 Score = 52.8 bits (125), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 17/152 (11%)

Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156
           R+LDLGTGTG + L   +  ++P     G+D+   A+E A  N   +  ++R    + D 
Sbjct: 40  RVLDLGTGTGLIALMAAQRCQAPV---CGIDVDEAAVEQALENVAASPWADRIRIWKQDV 96

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
              ++  +G+FD IVSNPPY    ++ C        D + +     DGL  +  + + V 
Sbjct: 97  REMWAETDGVFDAIVSNPPYFTEKVL-CP-------DRQRNAARHTDGLD-FDELLEAVC 147

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           R L + G+ SV +  +   D + +    +L+L
Sbjct: 148 RLLTERGVFSVVLPSDAGRDFIGLALRHRLYL 179


>gi|227495667|ref|ZP_03925983.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
 gi|226830899|gb|EEH63282.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
          Length = 509

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 81/167 (48%), Gaps = 22/167 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCL-ALLKESPFFKGV 125
           SS T +P  +  +L       +L +   RD V R+LDLGTG G + + A L        V
Sbjct: 137 SSVTGKPVEKDHVLGIGGATRTLLQATPRDQVGRVLDLGTGCGIIGMYAALHADEV---V 193

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG- 184
             DIS +A+ +A  NA  N V  +   +Q   F  ++G FD+I+SNPP++  +  D L  
Sbjct: 194 ATDISARAVMLADFNAHLNEV--KMQVVQGSLFEPIKGDFDLILSNPPFV--ITPDSLRE 249

Query: 185 ---LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              LE R        DGG  G S    +  G + HL + GL SV +G
Sbjct: 250 TGILEYR--------DGGQTGDSLVAQVVAGAAAHLREGGL-SVMLG 287


>gi|307296819|ref|ZP_07576637.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
 gi|306877732|gb|EFN08958.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
          Length = 325

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI DLGTG G   + L +  P  + +  D++  AL  A+ NA   G+  R      D   
Sbjct: 150 RIADLGTGAGVGAVTLARLRPDARILMTDVNPAALRFARINAGLAGIEAR--QALGDRLD 207

Query: 160 SVEGLFDVIVSNPPYI 175
             EG FD+IV+NPPYI
Sbjct: 208 PREGRFDLIVANPPYI 223


>gi|238752630|ref|ZP_04614102.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei
           ATCC 43380]
 gi|238709144|gb|EEQ01390.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei
           ATCC 43380]
          Length = 347

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  ALE +++    N +      + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLCDVSAAALEASRATLAANNIEA--PVIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGMQTSLTAAEM 284


>gi|224368758|ref|YP_002602919.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum
           HRM2]
 gi|223691474|gb|ACN14757.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum
           HRM2]
          Length = 218

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI DLGTG G + L L ++ P     G++I    ++IA  N   N ++++   L SD  S
Sbjct: 28  RIADLGTGCGIIPLLLSRKHPETHITGIEIQGALVDIANKNIQKNHLTDQVTILLSDIRS 87

Query: 160 SVE----GLFDVIVSNPPYIES 177
            V     G  D++V+NPPYI+ 
Sbjct: 88  LVPADLGGPVDLVVTNPPYIKQ 109


>gi|238794780|ref|ZP_04638382.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           intermedia ATCC 29909]
 gi|238725860|gb|EEQ17412.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           intermedia ATCC 29909]
          Length = 347

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEL 284


>gi|22127624|ref|NP_671047.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis KIM
           10]
 gi|45443486|ref|NP_995025.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809848|ref|YP_653764.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Antiqua]
 gi|108810463|ref|YP_646230.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Nepal516]
 gi|145600460|ref|YP_001164536.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Pestoides F]
 gi|150260533|ref|ZP_01917261.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CA88-4125]
 gi|153946974|ref|YP_001402462.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419874|ref|YP_001605415.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Angola]
 gi|165927283|ref|ZP_02223115.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165936497|ref|ZP_02225065.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009029|ref|ZP_02229927.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211827|ref|ZP_02237862.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400573|ref|ZP_02306082.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419039|ref|ZP_02310792.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167426101|ref|ZP_02317854.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469141|ref|ZP_02333845.1| methyltransferase family protein [Yersinia pestis FV-1]
 gi|170025851|ref|YP_001722356.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|218927628|ref|YP_002345503.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis CO92]
 gi|229836992|ref|ZP_04457157.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A]
 gi|229840310|ref|ZP_04460469.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842389|ref|ZP_04462544.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900651|ref|ZP_04515775.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516]
 gi|270487989|ref|ZP_06205063.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27]
 gi|294502525|ref|YP_003566587.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Z176003]
 gi|122980358|sp|Q1CN00|RSMC_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123245407|sp|Q1C153|RSMC_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123776538|sp|Q7CG56|RSMC_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725327|sp|A7FMI4|RSMC_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725329|sp|A9R058|RSMC_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725330|sp|A4TQK1|RSMC_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725331|sp|B1JL46|RSMC_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|21960735|gb|AAM87298.1|AE013978_10 putative enzyme [Yersinia pestis KIM 10]
 gi|45438355|gb|AAS63902.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108774111|gb|ABG16630.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Nepal516]
 gi|108781761|gb|ABG15819.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Antiqua]
 gi|115346239|emb|CAL19108.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CO92]
 gi|145212156|gb|ABP41563.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Pestoides F]
 gi|149289941|gb|EDM40018.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CA88-4125]
 gi|152958469|gb|ABS45930.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162352689|gb|ABX86637.1| methyltransferase family protein [Yersinia pestis Angola]
 gi|165915613|gb|EDR34222.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165920745|gb|EDR37993.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992368|gb|EDR44669.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206573|gb|EDR51053.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963033|gb|EDR59054.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049941|gb|EDR61349.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055024|gb|EDR64824.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752385|gb|ACA69903.1| rRNA (guanine-N(2)-)-methyltransferase [Yersinia pseudotuberculosis
           YPIII]
 gi|229681990|gb|EEO78082.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516]
 gi|229690699|gb|EEO82753.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696676|gb|EEO86723.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705935|gb|EEO91944.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A]
 gi|262360555|gb|ACY57276.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           D106004]
 gi|270336493|gb|EFA47270.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27]
 gi|294352984|gb|ADE63325.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Z176003]
          Length = 347

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|154151408|ref|YP_001405026.1| putative methylase [Candidatus Methanoregula boonei 6A8]
 gi|153999960|gb|ABS56383.1| putative methylase [Methanoregula boonei 6A8]
          Length = 185

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 30/187 (16%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +  ++P  +T LL+++A      + E R   R+L++GTG+G +  AL+++    + V  D
Sbjct: 6   TQVYQPEADTFLLLEAA------QEEVRPGDRVLEIGTGSGRIAAALVRDH---EVVATD 56

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLG 184
           I+  A+  A+         E  D ++ D FS + G F++I+ NPPY+    E  I D L 
Sbjct: 57  INPHAVFCARK--------EGLDVIRCDLFSGIRGRFNLILFNPPYLPTRPEERIDDWL- 107

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                     +LDGG  G +     A  V   L+  G   + I     +  V+   SR  
Sbjct: 108 --------EFALDGGATGRATIDRFASSVGDVLSPGGRLLLLISTLTGLPEVQELFSRYG 159

Query: 245 FLVNAFK 251
           F V+  +
Sbjct: 160 FAVSVVR 166


>gi|67922523|ref|ZP_00516031.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol
           methylase [Crocosphaera watsonii WH 8501]
 gi|67855607|gb|EAM50858.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol
           methylase [Crocosphaera watsonii WH 8501]
          Length = 401

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  +R+ +RILD G GTG     L+  +P  + VGVDIS KALEIA+  +  
Sbjct: 41  AAYNFCTGRKPERENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRSQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+        F  L  +    +EG FD+I
Sbjct: 101 SGVATNHNHPISFHHLPLENADQIEGEFDLI 131


>gi|297572232|ref|YP_003698006.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
 gi|296932579|gb|ADH93387.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
          Length = 496

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG G    A++           DIS +AL+ A+ NA  NGV+   +T     F  
Sbjct: 154 VLDLGTGCG--IHAIIAAKAGAHATATDISQRALDYAQFNARLNGVT--INTRIGSLFEP 209

Query: 161 VEG-LFDVIVSNPPYI--ESVIVDCLG-LEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           V G  F V+VSNPP++   S + D +G LE R        DGG  G +   T+  G+  H
Sbjct: 210 VAGETFSVVVSNPPFVITPSDVRDSVGTLEYR--------DGGAPGDTLAATVVAGLDAH 261

Query: 217 LNKDG 221
           +  DG
Sbjct: 262 VAPDG 266


>gi|257125089|ref|YP_003163203.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b]
 gi|257049028|gb|ACV38212.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b]
          Length = 220

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           IL++G G G + L L K   F K   V+I     EI K N   N + E+  ++  D   +
Sbjct: 50  ILEIGAGQGIITLLLSKIEIFEKIFAVEIQKDIFEILKKNIKINNLEEKITSINED-IKT 108

Query: 161 VEGLFDVIVSNPPY 174
           ++G +D I SNPPY
Sbjct: 109 IKGEYDFIFSNPPY 122


>gi|30018371|ref|NP_830002.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
 gi|29893911|gb|AAP07203.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
          Length = 199

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 14/99 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL++   AF +P I+      ILD+G G G + L+L KE   F+G  V   D++ +AL
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKE---FQGREVHMVDVNERAL 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +AK NA  N + +     QS  + +V+G +  I+SNPP
Sbjct: 96  GLAKENAANNKI-KNIRIFQSSVYENVDGKYAAILSNPP 133


>gi|300715160|ref|YP_003739963.1| ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
           Eb661]
 gi|299060996|emb|CAX58103.1| Ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
           Eb661]
          Length = 344

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+E +K+    N +    +   S+ +S
Sbjct: 199 KVLDMGCGAGVLSAMLASFSPKVRLFMTDVNAAAIEASKATLAANDLEG--EVFASNVYS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G +D+I+SNPP+ + +              + SLD         +T+  G  +HLN 
Sbjct: 257 DVNGRYDMIISNPPFHDGM--------------QTSLDAA-------QTLIRGAVKHLNM 295

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 296 GGELRIVANAFLPYPQILD--ETFGSHEVLLQNGRFKVY 332


>gi|229125618|ref|ZP_04254650.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
 gi|228657810|gb|EEL13616.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
          Length = 213

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 8/96 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           K NA  N + +     QS  + +V+G +  I+SNPP
Sbjct: 113 KENAANNKI-KNIRIFQSSVYENVDGKYAAILSNPP 147


>gi|171693673|ref|XP_001911761.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946785|emb|CAP73589.1| unnamed protein product [Podospora anserina S mat+]
          Length = 336

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 27/184 (14%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSL 90
           ++  +  A ++  K   +  ILG + F  + +        PRPETE ++    + L FS 
Sbjct: 53  RKLGIWQACLKREKGIPLQYILGNQPFGPLDILCKPGVLIPRPETESIITHLTTLLPFS- 111

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTN----- 144
                   ++ILDL TGTG + L +    P   + +GVDIS  A+ +++ N   N     
Sbjct: 112 -----SSPLKILDLCTGTGCIPLLIASLLPSTSQTLGVDISPLAISLSRQNLSHNISLSH 166

Query: 145 ---GVSERFDTLQSDWFSSV--------EGLFDVIVSNPPYIESVIVD-CLGLEVRDFDP 192
                S+     +SD FS           G  D++ SNPPYI     +      VR ++P
Sbjct: 167 LPLSASKSITFTKSDIFSPSFLSSLPFSPGELDILTSNPPYISPAGFNKNTERSVRFYEP 226

Query: 193 RISL 196
           +++L
Sbjct: 227 KLAL 230


>gi|6324266|ref|NP_014336.1| Mtq1p [Saccharomyces cerevisiae S288c]
 gi|1730740|sp|P53944|MTQ1_YEAST RecName: Full=Mitochondrial N(5)-glutamine methyltransferase MTQ1
 gi|994824|gb|AAA99648.1| Ynl2420p [Saccharomyces cerevisiae]
 gi|1301939|emb|CAA95936.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|51012621|gb|AAT92604.1| YNL063W [Saccharomyces cerevisiae]
 gi|190409052|gb|EDV12317.1| hypothetical protein SCRG_03198 [Saccharomyces cerevisiae RM11-1a]
 gi|259149297|emb|CAY82539.1| Mtq1p [Saccharomyces cerevisiae EC1118]
 gi|285814589|tpg|DAA10483.1| TPA: Mtq1p [Saccharomyces cerevisiae S288c]
 gi|323303250|gb|EGA57048.1| Mtq1p [Saccharomyces cerevisiae FostersB]
          Length = 314

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201
           S          D++  NPPYI     +  +   V+ F+PR++L G ++
Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219


>gi|209516570|ref|ZP_03265424.1| methyltransferase small [Burkholderia sp. H160]
 gi|209503011|gb|EEA03013.1| methyltransferase small [Burkholderia sp. H160]
          Length = 374

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  ALL +    K V  D   +AL  A+ N    G  E+ + +Q+D F   +
Sbjct: 201 DIGTGTG-VLAALLAKRGVGKIVATDQDSRALACARENLARLGYGEQVEIVQADLFP--D 257

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           G   ++V NPP++ +     L   V D D R+ L G ++GL+ + T
Sbjct: 258 GRAPLVVCNPPWVPARPASPLEYAVYDPDSRMLL-GFLNGLADHLT 302


>gi|157368894|ref|YP_001476883.1| 16S ribosomal RNA m2G1207 methyltransferase [Serratia
           proteamaculans 568]
 gi|226712980|sp|A8G9G5|RSMC_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157320658|gb|ABV39755.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans
           568]
          Length = 347

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  ++K    ++LD+G G G +   L K SP  K    D++  A+E +++    NG+   
Sbjct: 189 LSTLDKHMKGKVLDVGCGAGVMASVLSKLSPKMKLTLSDVNAAAIESSRATLAANGIEG- 247

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            + + S+ +S + G FD+I+SNPP+
Sbjct: 248 -EVIVSNVYSDITGRFDLIISNPPF 271


>gi|188501450|gb|ACD54583.1| HemK-like protein methyltransferase-like protein [Adineta vaga]
          Length = 322

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R++D+G G G   + L K  P  + +GVDI+  AL +   NA    V+       SD 
Sbjct: 143 VRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTSINARLANVN--VIACHSDL 200

Query: 158 FSSVEGLFDVIVSNPPYI 175
              V+G FD+I+SNPPY+
Sbjct: 201 LKDVQGDFDMIISNPPYL 218


>gi|151944471|gb|EDN62749.1| methyltransferase [Saccharomyces cerevisiae YJM789]
          Length = 314

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201
           S          D++  NPPYI     +  +   V+ F+PR++L G ++
Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219


>gi|48477307|ref|YP_023013.1| methyltransferase [Picrophilus torridus DSM 9790]
 gi|48429955|gb|AAT42820.1| methyltransferase [Picrophilus torridus DSM 9790]
          Length = 182

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 36/189 (19%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +  + D + P  +T L++D+               ++L++G GTG + + L   +     
Sbjct: 3   IKYNDDVYRPAEDTYLMMDNIKCGK----------KVLEIGAGTGIISVNLALNN--HDV 50

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI  KA+++ K NA  N V+ +   ++SD F ++   +D I+ NPPY        L 
Sbjct: 51  TATDIDDKAIDLIKENARINHVNIKI--IKSDLFDNIYDKYDTIIFNPPY--------LP 100

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +E  D    I   GG DG +           HLN +G  S+ I  +   D+ +       
Sbjct: 101 VENED----IKWSGGSDGFNVTSRFLKDAYMHLNDNG--SIYIILSDLTDINK------- 147

Query: 245 FLVNAFKDY 253
            L N FK+Y
Sbjct: 148 -LKNDFKNY 155


>gi|330718919|ref|ZP_08313519.1| 16S RNA G1207 methylase RsmC [Leuconostoc fallax KCTC 3537]
          Length = 206

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +ILDLGTG G V +A+ K+  F + V  VD++ +AL++A+ NA  N V++     QSD +
Sbjct: 69  KILDLGTGYGVVGIAVAKK--FKRTVDMVDVNERALQLARVNAKKNNVADVTHIFQSDVY 126

Query: 159 SSVEGLFDVIVSNPP 173
            ++   + +I+ NPP
Sbjct: 127 DNISEQYGLILVNPP 141


>gi|256005297|ref|ZP_05430263.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|255990733|gb|EEU00849.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|316939532|gb|ADU73566.1| methyltransferase small [Clostridium thermocellum DSM 1313]
          Length = 196

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ILD+G G G   + LALL  S F     +DI+ +A+++A  N   NGV+     L SD F
Sbjct: 59  ILDIGCGYGVIGISLALLNPSSFV--TMIDINERAVDLASQNIHLNGVTNA-TALTSDGF 115

Query: 159 SSVEGLFDVIVSNPP 173
           S+V   FD IVSNPP
Sbjct: 116 SNVSDKFDAIVSNPP 130


>gi|307703575|ref|ZP_07640517.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
 gi|307622982|gb|EFO01977.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
          Length = 193

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +E  +   +LD+G G G + L+L K +   +   VDI+ +AL++A+ N
Sbjct: 38  MVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQN 96

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V       QS+ +  +EG FD ++SNPP
Sbjct: 97  AERNKVEATI--FQSNIYEQIEGKFDHVISNPP 127


>gi|152986240|ref|YP_001348482.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
 gi|150961398|gb|ABR83423.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
          Length = 318

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 48  HESIHR-ILGWRD------------FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           H+ IHR   GWR              ++   TL++D     P+T    D  +   L  ++
Sbjct: 75  HDLIHREAEGWRSRVRYSSLGDELLVHSAFPTLAADAVFFGPDTYRF-DRLIRSHLAALD 133

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              + R  D+G G G   + +    P  +  G+DI+  AL++A+ NA   GV +     +
Sbjct: 134 PTGIRRAADIGCGAGPGAIRIALACPDAEVHGLDINPAALDLARVNAALAGV-DNLTLAR 192

Query: 155 SDWFSSVEGLFDVIVSNPPYI 175
           SD      G FD+IV+NPPY+
Sbjct: 193 SDLLCQAPGRFDLIVANPPYL 213


>gi|226713003|sp|A0L0V1|RSMC_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 262 QTSGKFDGIISNPPF 276


>gi|253583730|ref|ZP_04860928.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           varium ATCC 27725]
 gi|251834302|gb|EES62865.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           varium ATCC 27725]
          Length = 225

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+GTG G + + L+ +       G+DI  + +E+AK N   N +++  + +  D   
Sbjct: 43  KILDIGTGNGIIPVLLVSKEKGEDITGIDIQEENVELAKRNVQLNNLNDNIEIVHGDVKE 102

Query: 160 -SVEGLFDVIVSNPPYIE 176
            S+   FD IVSNPPY+E
Sbjct: 103 YSMGNSFDYIVSNPPYME 120


>gi|117921884|ref|YP_871076.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3]
 gi|117614216|gb|ABK49670.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3]
          Length = 353

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 273 QTSGKFDGIISNPPF 287


>gi|125975416|ref|YP_001039326.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
 gi|281419377|ref|ZP_06250392.1| methyltransferase [Clostridium thermocellum JW20]
 gi|125715641|gb|ABN54133.1| 16S rRNA m(2)G 1207 methyltransferase [Clostridium thermocellum
           ATCC 27405]
 gi|281406997|gb|EFB37260.1| methyltransferase [Clostridium thermocellum JW20]
          Length = 196

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ILD+G G G   + LALL  S F     +DI+ +A+++A  N   NGV+     L SD F
Sbjct: 59  ILDIGCGYGVIGISLALLNPSSFV--TMIDINERAVDLASQNIHLNGVTNA-TALTSDGF 115

Query: 159 SSVEGLFDVIVSNPP 173
           S+V   FD IVSNPP
Sbjct: 116 SNVSDKFDAIVSNPP 130


>gi|300689993|ref|YP_003750988.1| methyltransferase, methylase of polypeptide chain release factors
           [Ralstonia solanacearum PSI07]
 gi|299077053|emb|CBJ49669.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum PSI07]
          Length = 420

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + VG D   +AL  A+ N    G+  + + +++D F   E
Sbjct: 247 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACARENLTRLGLQSQVEVIEADLFP--E 303

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 304 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 346


>gi|170288954|ref|YP_001739192.1| methyltransferase small [Thermotoga sp. RQ2]
 gi|170176457|gb|ACB09509.1| methyltransferase small [Thermotoga sp. RQ2]
          Length = 210

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 10/103 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           ++LDLG G G + + L KE P  +    DI+ +A+E AK NA  + V    R+  L   W
Sbjct: 63  KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKNHNVEVDIRWGNLYEPW 122

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               EG+ FD+IVSNPP +    V    +E+    P    +GG
Sbjct: 123 ----EGMKFDMIVSNPPIVAGKKV---WMEIVKSAPEFLEEGG 158


>gi|293365627|ref|ZP_06612336.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
 gi|291315995|gb|EFE56439.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
          Length = 196

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +E  +   +LD+G G G + L+L K +   +   VDI+ +AL++A+ N
Sbjct: 41  MVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQN 99

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V       QS+ +  +EG FD ++SNPP
Sbjct: 100 AERNKVEATI--FQSNIYEQIEGKFDHVISNPP 130


>gi|331266183|ref|YP_004325813.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
 gi|326682855|emb|CBZ00472.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
          Length = 196

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +E  +   +LD+G G G + L+L K +   +   VDI+ +AL++A
Sbjct: 38  SKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 97  RQNAERNKVEATI--FQSNIYEQVEGKFDHVISNPP 130


>gi|323307444|gb|EGA60718.1| Mtq1p [Saccharomyces cerevisiae FostersO]
          Length = 314

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 7/168 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201
           S          D++  NPPYI     +  +   V+ F+PR++L G ++
Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219


>gi|307706395|ref|ZP_07643206.1| methyltransferase domain protein [Streptococcus mitis SK321]
 gi|307618211|gb|EFN97367.1| methyltransferase domain protein [Streptococcus mitis SK321]
          Length = 193

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +E      +LD+G G G + L+L K +   +   VDI+ +AL++A
Sbjct: 35  SKKMVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLA 93

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V+      QS+ +  VEG FD ++SNPP
Sbjct: 94  RQNAERNKVAATI--FQSNIYEQVEGKFDHVISNPP 127


>gi|188501470|gb|ACD54602.1| modification methylase HemK family-like protein [Adineta vaga]
          Length = 322

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R++D+G G G   + L K  P  + +GVDI+  AL +   NA    V+       SD 
Sbjct: 143 VRRVVDIGCGAGPGAIMLAKTYPNAEILGVDINDTALRLTSINARLANVN--VVACHSDL 200

Query: 158 FSSVEGLFDVIVSNPPYI 175
              V+G FD+I+SNPPY+
Sbjct: 201 LKDVQGDFDMIISNPPYL 218


>gi|281412563|ref|YP_003346642.1| methyltransferase small [Thermotoga naphthophila RKU-10]
 gi|281373666|gb|ADA67228.1| methyltransferase small [Thermotoga naphthophila RKU-10]
          Length = 210

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 10/103 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           ++LDLG G G + + L KE P  +    DI+ +A+E AK NA  + V    R+  L   W
Sbjct: 63  KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKNHNVEVDIRWGNLYEPW 122

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               EG+ FD+IVSNPP +    V    +E+    P    +GG
Sbjct: 123 ----EGMKFDMIVSNPPIVAGKKV---WMEIVKRAPEFLEEGG 158


>gi|226713002|sp|Q0HRD8|RSMC_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 262 QTSGKFDGIISNPPF 276


>gi|226713001|sp|Q0HMF0|RSMC_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 261

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 262 QTSGKFDGIISNPPF 276


>gi|114048824|ref|YP_739374.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7]
 gi|113890266|gb|ABI44317.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7]
          Length = 353

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 273 QTSGKFDGIISNPPF 287


>gi|154494856|ref|ZP_02033861.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC
           43184]
 gi|154085406|gb|EDN84451.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC
           43184]
          Length = 238

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 19/153 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILD+GTGTG + L L + S   K     +DI   A   A+ NA ++  + R +   SD 
Sbjct: 40  RILDIGTGTGLIALMLAQRS---KAAIDAIDIEADACLQAQENAESSLFAGRINVFHSDL 96

Query: 158 FSSVEG---LFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               +    L+D+IVSNPPY ++S+    L          ++L+   D L + R +    
Sbjct: 97  VDFAQASTHLYDLIVSNPPYFVDSLKCPNLQRNTARHTDTLTLE---DLLQYSRKL---- 149

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              L   G  ++ + Y+QK  +    +++ LFL
Sbjct: 150 ---LTPQGRIALILPYDQKDRLTDCIQTQNLFL 179


>gi|144898410|emb|CAM75274.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 249

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ R   RILDLG+G G   L LL         G+++  +  ++A++NAV NG+  R+  
Sbjct: 41  VDARAGERILDLGSGVGTAGLCLLARVDGIHVTGLELQSQLADLAQANAVENGLDGRYTV 100

Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176
           +Q    S    L    FD +++NPP+ E
Sbjct: 101 VQGCLTSRPATLRGVTFDHVITNPPWYE 128


>gi|330990855|ref|ZP_08314810.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1]
 gi|329762001|gb|EGG78490.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1]
          Length = 323

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR +D+G GTG   + + +  P  + V VDI+  AL +A+ N    GV       Q D  
Sbjct: 146 VRAVDIGCGTGLGAIMIAQVCPSTEVVMVDINPDALRLARINVGLAGVGG-IMAWQGDLL 204

Query: 159 SSVEGLFDVIVSNPPYIE 176
           S + G FD+I+SNPPY+ 
Sbjct: 205 SGLSGAFDLIISNPPYLP 222


>gi|220915946|ref|YP_002491250.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953800|gb|ACL64184.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 386

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R  D+GTGTG   LAL+      + +  D+  +A+  A+ NA   G++ + + +++D
Sbjct: 204 DGKRAFDVGTGTG--VLALVLARAGARVIATDLEPRAVACARENAARLGLAGQVEVVEAD 261

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            F   EGL DVIV NPP+I       L   V  +DP
Sbjct: 262 LFP--EGLADVIVCNPPWIPGPARGPLERAV--YDP 293


>gi|113969031|ref|YP_732824.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4]
 gi|113883715|gb|ABI37767.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4]
          Length = 353

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 272

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 273 QTSGKFDGIISNPPF 287


>gi|167747821|ref|ZP_02419948.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662]
 gi|167653183|gb|EDR97312.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662]
          Length = 250

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  +++K     +LDLGTGTG + + +  ++P     G++I  +   +A  +A
Sbjct: 32  MDAVLLSSFVKVKKNG--NVLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAGMAARSA 89

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175
             NG+ E+ + ++ D   +        FDVI SNPPY+
Sbjct: 90  ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYM 127


>gi|226309668|ref|YP_002769562.1| hypothetical protein BBR47_00810 [Brevibacillus brevis NBRC 100599]
 gi|226092616|dbj|BAH41058.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 255

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      + KR   ++LD+ TG GA+ L +   +P     G++I  +   +A  N 
Sbjct: 36  MDAVLLARFASVPKRG--KVLDMCTGNGAIPLIMTTRTPEASFDGIEIQERLFSMASRNV 93

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV 178
             NG++ER      D   +V     G FD+I  NPPY+ + 
Sbjct: 94  TLNGLNERITMHHGDVKDAVSLFGHGNFDLITCNPPYMPAT 134


>gi|310825775|ref|YP_003958132.1| Predicted O-methyltransferase [Eubacterium limosum KIST612]
 gi|308737509|gb|ADO35169.1| Predicted O-methyltransferase [Eubacterium limosum KIST612]
          Length = 263

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R++DLGTGTG + L L   +   K   ++I    +E+A  +   NG+ E+ + +  
Sbjct: 46  RKKSRVIDLGTGTGIIPLLLYGRTGAQKIQALEIQENMVEMAGRSIACNGLEEKIEIIHG 105

Query: 156 DWFSSVEGL----FDVIVSNPPYIE 176
           D  +  E +    +DV+VSNPPY++
Sbjct: 106 DIRNPGEQVRPTSYDVVVSNPPYMK 130


>gi|300172663|ref|YP_003771828.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887041|emb|CBL91009.1| Ribosomal RNA small subunit methyltransferase C [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 5/76 (6%)

Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +ILDLGTG G V +A+ K  + P       D++ +AL +A+ NA  NGV    +  QSD 
Sbjct: 70  KILDLGTGYGPVGVAVAKYLQQPVDM---TDVNERALALARKNAEQNGVIGLVNVFQSDI 126

Query: 158 FSSVEGLFDVIVSNPP 173
           +++V   + +I++NPP
Sbjct: 127 YANVSDKYALILANPP 142


>gi|256004046|ref|ZP_05429031.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|281419117|ref|ZP_06250134.1| Methyltransferase type 11 [Clostridium thermocellum JW20]
 gi|255991969|gb|EEU02066.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|281407266|gb|EFB37527.1| Methyltransferase type 11 [Clostridium thermocellum JW20]
 gi|316941710|gb|ADU75744.1| Methyltransferase type 11 [Clostridium thermocellum DSM 1313]
          Length = 254

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   I+K D V  +DLGTGTG + + +  ++     +G++I  +  E+A+ + 
Sbjct: 35  LDAVLLANFADIKKGDTV--IDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSV 92

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N + +R   +  D  +SVE      FDV+V+NPPY+
Sbjct: 93  KLNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYM 130


>gi|52425643|ref|YP_088780.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|81825502|sp|Q65S65|RSMC_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|52307695|gb|AAU38195.1| RsmC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 333

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 4/85 (4%)

Query: 96  RDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +D +R  +LDLG G G +   +  ++P  K    DI   AL  A+   + N +S +   L
Sbjct: 190 KDNIRGDVLDLGCGAGVIGSMIKLKNPPAKVTMTDIHAMALASAERTLLENKLSGQ--VL 247

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESV 178
            SD FS VEG FD+I+SNPP+ + +
Sbjct: 248 ASDVFSHVEGKFDLIISNPPFHDGI 272


>gi|104782146|ref|YP_608644.1| DNA methylase [Pseudomonas entomophila L48]
 gi|95111133|emb|CAK15853.1| putative DNA methylase [Pseudomonas entomophila L48]
          Length = 317

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G GTG   L++ + +P  +   VDI+  AL     NA   GV+       SD  + V
Sbjct: 142 VDIGCGTGVGALSIARAAPQAQVTAVDINPLALRYTAVNAALAGVAN-VSPQASDLLNGV 200

Query: 162 EGLFDVIVSNPPYI 175
            G FD+IV+NPPY+
Sbjct: 201 SGHFDLIVANPPYM 214


>gi|73670682|ref|YP_306697.1| HemK-like protein [Methanosarcina barkeri str. Fusaro]
 gi|72397844|gb|AAZ72117.1| HemK related protein [Methanosarcina barkeri str. Fusaro]
          Length = 202

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 22/170 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  ++ LL D+AL  + P +      RIL++GTG+G V   LL        V  +I+ 
Sbjct: 20  YEPAEDSFLLADAALKDAKPGM------RILEIGTGSGFVSSVLLTNLKEIYLVATEINP 73

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESVIVDCLGLEV 187
            A   AK N V    ++ F  ++S    + E LFD+I+ NPPY+    E  +   L    
Sbjct: 74  HAARCAKMNGVKVIRTDLFKGIKS---KNPENLFDLILFNPPYLPTSEEEKVPGWL---- 126

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                  + DGGI G        D V  +L   G   V I     +D V+
Sbjct: 127 -----NYAFDGGISGRDTLDRFLDEVRDYLKLGGEILVLISSITGLDAVK 171


>gi|258653913|ref|YP_003203069.1| methyltransferase small [Nakamurella multipartita DSM 44233]
 gi|258557138|gb|ACV80080.1| methyltransferase small [Nakamurella multipartita DSM 44233]
          Length = 509

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 69/154 (44%), Gaps = 19/154 (12%)

Query: 75  RPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           RP+  L + SA + +L R   RD V   LDLGTG G   L L   +     V  DIS +A
Sbjct: 142 RPDHVLGLGSA-SITLARAIVRDPVTTALDLGTGCGIQALHLAGHAGSI--VATDISPRA 198

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A + A  N   + +D      F  V G  FD+IVSNPP++           V D   
Sbjct: 199 LALAGATARLN--QQHWDLRAGSLFDPVAGEQFDLIVSNPPFV-----------VGDGTT 245

Query: 193 RISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R +  D G+ G    R I +G   HL   G   +
Sbjct: 246 RFTYRDSGLPGDGVGRAIVEGARTHLRPGGTAQL 279


>gi|168334101|ref|ZP_02692314.1| Methyltransferase type 11 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 248

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDW 157
           +ILD+GTGTG + L L       K VG+DI    +E+A    + N VS   +   L    
Sbjct: 48  KILDIGTGTGIIPLILYAIHKKGKFVGIDIQEAMVEMASRTMMLNQVSNEIEIKCLDIKN 107

Query: 158 FSS--VEGLFDVIVSNPPYIES 177
           F      G FD+IVSNPPY+++
Sbjct: 108 FGQDFKRGSFDIIVSNPPYMKA 129


>gi|320530691|ref|ZP_08031735.1| methyltransferase small domain protein [Selenomonas artemidis
           F0399]
 gi|320136978|gb|EFW28916.1| methyltransferase small domain protein [Selenomonas artemidis
           F0399]
          Length = 215

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 16/101 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR+  R+  R+LDLGTG G + L ++ E    + + V+++     +A  NA
Sbjct: 1   MDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDE--VREVLAVELNSAQAALAVRNA 56

Query: 142 VTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPY 174
             NGVSE+    + D+        F S    FD++ +NPPY
Sbjct: 57  ALNGVSEKITVREGDYRDPPALFVFES----FDLVFANPPY 93


>gi|307704613|ref|ZP_07641515.1| methyltransferase domain protein [Streptococcus mitis SK597]
 gi|307621815|gb|EFO00850.1| methyltransferase domain protein [Streptococcus mitis SK597]
          Length = 193

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGTFDHVISNPP 127


>gi|322376393|ref|ZP_08050886.1| methyltransferase domain protein [Streptococcus sp. M334]
 gi|321282200|gb|EFX59207.1| methyltransferase domain protein [Streptococcus sp. M334]
          Length = 196

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 61  VLDVGCGYGTLGLSLAK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGKFDHVISNPP 130


>gi|296111507|ref|YP_003621889.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154]
 gi|295833039|gb|ADG40920.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154]
          Length = 213

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +ILDLGTG G V +A+ K     + V + D++ +AL++A+ NA  NGV ++    QSD +
Sbjct: 70  KILDLGTGYGPVGVAIAKA--LNRRVDMSDVNERALDLARQNADNNGVGDQVKIFQSDMY 127

Query: 159 SSVEGLFDVIVSNPP 173
            ++   + +I+ NPP
Sbjct: 128 DNISDKYALILVNPP 142


>gi|227112602|ref|ZP_03826258.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 349

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L K+SP  +    D+S  A+E +K+    N +    + + S+ +S
Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAIESSKATLAANALEG--EVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPY 174
            + G FD+IVSNPP+
Sbjct: 257 DINGRFDMIVSNPPF 271


>gi|323439811|gb|EGA97528.1| methyltransferase small subunit [Staphylococcus aureus O11]
          Length = 202

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 22/156 (14%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSD-------- 46

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +LV + L    P   KR    I D+G G G + L + K SP      +D++ +AL + K
Sbjct: 47  -VLVQTFLKTRPPGPSKR----IADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
            N   NG+ +     +SD  S+VE   FD I++NPP
Sbjct: 102 KNQKLNGI-DNVIVKESDALSAVEDKSFDFILTNPP 136


>gi|125974592|ref|YP_001038502.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
 gi|125714817|gb|ABN53309.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
          Length = 251

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   I+K D V  +DLGTGTG + + +  ++     +G++I  +  E+A+ + 
Sbjct: 32  LDAVLLANFADIKKGDTV--IDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N + +R   +  D  +SVE      FDV+V+NPPY+
Sbjct: 90  KLNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYM 127


>gi|218131078|ref|ZP_03459882.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697]
 gi|317477035|ref|ZP_07936277.1| methyltransferase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986782|gb|EEC53115.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697]
 gi|316906828|gb|EFV28540.1| methyltransferase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
          Length = 236

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   ILD+G G+G + L L + +P+     ++I   A   AK N  ++  S+R + + S
Sbjct: 36  QNAKYILDVGAGSGLISLQLAQRNPWASITSIEIDPAAAAQAKENIQSSPWSDRMEVICS 95

Query: 156 DWFS-SVEGLFDVIVSNPPY 174
           D+     E  FD+IVSNPPY
Sbjct: 96  DFRDYHAENKFDLIVSNPPY 115


>gi|222152110|ref|YP_002561270.1| hypothetical protein MCCL_1867 [Macrococcus caseolyticus JCSC5402]
 gi|222121239|dbj|BAH18574.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 198

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 15/130 (11%)

Query: 48  HES-IHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILD 103
           HES I  I+G  D   ++LT  S  F        + LLV + L  + P       +R+LD
Sbjct: 14  HESTISFIMGRHD---LKLTTDSGVFSKGGVDFGSNLLVKTFLEDAHP-------IRVLD 63

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G + L + K  P      VD++ +AL +A+ NA+ N V +      SD  + V  
Sbjct: 64  VGCGYGTMGLMIAKHFPDCTLHMVDVNERALNLARKNAMHNNVKD-VHIYISDGLNEVTE 122

Query: 164 LFDVIVSNPP 173
            FD +++NPP
Sbjct: 123 FFDAVITNPP 132


>gi|160915108|ref|ZP_02077321.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991]
 gi|158432907|gb|EDP11196.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991]
          Length = 221

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+AL     +I K +  R+LD+GT  GA+ LA  +  P +   GV+I  +A E+A+ N 
Sbjct: 28  TDTALLAEFMKINKGE--RVLDVGTNNGALLLAANRYEPSYL-YGVEIQEEAAELARMNM 84

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
             +G+    D L +D+  +     DV+V NPPY +
Sbjct: 85  RHHGIVHA-DILCADYKEASLPAVDVVVCNPPYFK 118


>gi|328958740|ref|YP_004376126.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4]
 gi|328675064|gb|AEB31110.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4]
          Length = 204

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + LAL KE P      VD++ +AL +AK NA  N +S       SD + S
Sbjct: 63  ILDVGCGYGPMGLALAKEDPERNVEMVDVNERALGLAKQNASNNRLSNVL-IHTSDIYES 121

Query: 161 VEGL-FDVIVSNPP 173
           VEG  F  IVSNPP
Sbjct: 122 VEGKEFAAIVSNPP 135


>gi|229492339|ref|ZP_04386146.1| putative methylase [Rhodococcus erythropolis SK121]
 gi|229320748|gb|EEN86562.1| putative methylase [Rhodococcus erythropolis SK121]
          Length = 224

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 9/111 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL D AL F   R+  R   R+LDL TGTGA+ +A          V VDIS 
Sbjct: 10  YPPQHDTSLLAD-ALLFE--RLTARS--RVLDLCTGTGALAVAASAAG-AGHVVAVDISR 63

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +A   A+ N + NG S   D+ + D   +V G LFD+++SNPPY+ ++  D
Sbjct: 64  RACANARLNGILNGTS--IDSRRGDLTEAVHGELFDLVISNPPYVPALADD 112


>gi|255657495|ref|ZP_05402904.1| hypothetical protein CdifQCD-2_17756 [Clostridium difficile
           QCD-23m63]
 gi|296449091|ref|ZP_06890881.1| SAM-dependent methyltransferase [Clostridium difficile NAP08]
 gi|296879914|ref|ZP_06903887.1| SAM-dependent methyltransferase [Clostridium difficile NAP07]
 gi|296262184|gb|EFH08989.1| SAM-dependent methyltransferase [Clostridium difficile NAP08]
 gi|296429203|gb|EFH15077.1| SAM-dependent methyltransferase [Clostridium difficile NAP07]
          Length = 248

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSV 87

Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175
             NG+ ER + +  D  +   V  +  + V+ SNPPY+
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDVNGYHVVTSNPPYM 125


>gi|326328870|ref|ZP_08195204.1| putative transferase [Nocardioidaceae bacterium Broad-1]
 gi|325953355|gb|EGD45361.1| putative transferase [Nocardioidaceae bacterium Broad-1]
          Length = 492

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 84  SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           S  + SL ++  RD V   LDLGTG G   L L   S   + V  D++ +AL I   NA 
Sbjct: 136 SPASTSLAQLTIRDEVGTALDLGTGCGVQALHLATHSD--RVVATDVNQRALWITAFNAA 193

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
            N V++R D     +F  V G  FD+I +NPP++
Sbjct: 194 LNDVADRIDVRDGSFFEPVAGERFDLIATNPPFV 227


>gi|294495697|ref|YP_003542190.1| methylase [Methanohalophilus mahii DSM 5219]
 gi|292666696|gb|ADE36545.1| methylase [Methanohalophilus mahii DSM 5219]
          Length = 197

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 18/162 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N  +++ +D +EP  ++ LL D A+     RI   D +++L++G G+G V  A++  +
Sbjct: 6   YRNAFVSIENDVYEPAEDSFLLADVAI----DRI--SDGMKVLEMGVGSGFVS-AVVAAN 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              +  G DI+  ALE A  N +    S  F  L    +      FDVI+ NPPY+ +  
Sbjct: 59  KNVEPTGCDINPDALECAYKNGIQVFRSNLFGGLTKKAY------FDVILFNPPYLPTSE 112

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            + L   +       + DGG++G     T    VS +L   G
Sbjct: 113 EEKLEGWL-----NYAFDGGVEGRDIIATFFAEVSDYLKPGG 149


>gi|160888233|ref|ZP_02069236.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492]
 gi|156862179|gb|EDO55610.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492]
          Length = 235

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG + L L + +P  +   ++I   A   A  N   +  ++R + +  D+  
Sbjct: 40  RILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVEVICHDFRD 99

Query: 160 -SVEGLFDVIVSNPPY 174
              E  FD+IVSNPPY
Sbjct: 100 YQPENRFDLIVSNPPY 115


>gi|160942758|ref|ZP_02089999.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445923|gb|EDP22926.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103833|emb|CBL01377.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 304

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEK------------RD 97
           GWR +Y+     S     P  +       +L++D  LAF     E             R 
Sbjct: 108 GWRKYYHPMEIGSRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCLEALDEQVRG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A LK        GVDI   A+  A  NA  NGV ++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIAALKLGAA-SAEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGTYDIITAN 240


>gi|304315614|ref|YP_003850759.1| methyltransferase small [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777116|gb|ADL67675.1| methyltransferase small [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG GTG + + +  +S      GV+I     +IAK N V N +++R + +  D  +
Sbjct: 45  KIIDLGCGTGIIPILIAGKSSNTHVTGVEIQRDVADIAKRNVVLNNLTDRIEIINDDIRN 104

Query: 160 SVEGL----FDVIVSNPPYI 175
            V+ L    +D++ +NPPY+
Sbjct: 105 IVDKLGVEKYDIVTTNPPYM 124


>gi|83749844|ref|ZP_00946813.1| Methyltransferase [Ralstonia solanacearum UW551]
 gi|207744704|ref|YP_002261096.1| hypothetical protein 1177; methyltransferase small [Ralstonia
           solanacearum IPO1609]
 gi|83723481|gb|EAP70690.1| Methyltransferase [Ralstonia solanacearum UW551]
 gi|206596111|emb|CAQ63038.1| conserved hypothetical protein 1177; methyltransferase small
           [Ralstonia solanacearum IPO1609]
          Length = 342

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +      VG D   +AL  A+ N    G+  R + +++D F   E
Sbjct: 169 DIGTGTG-VLAAVLAKRGVKHVVGTDQDARALVCARENLARLGLQSRVEVIEADLFP--E 225

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 226 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 268


>gi|306825048|ref|ZP_07458390.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432484|gb|EFM35458.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 196

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLTK-AYGVQATMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGKFDHVISNPP 130


>gi|332798043|ref|YP_004459542.1| methyltransferase small [Tepidanaerobacter sp. Re1]
 gi|332695778|gb|AEE90235.1| methyltransferase small [Tepidanaerobacter sp. Re1]
          Length = 251

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  + +K D  R++D+GTG+G + L L  ++   + VG++I  +A + A  N 
Sbjct: 33  IDSVLLANFIKADKND--RVIDIGTGSGVIALLLSAKTDAKEIVGIEIVGEAFDRAVRNV 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N + ER   +  D   +V+      F V+V+NPPY+
Sbjct: 91  KMNRLEERVKIVHGDLKEAVKIFGRESFSVVVTNPPYM 128


>gi|253687014|ref|YP_003016204.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753592|gb|ACT11668.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 348

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L K+SP  +    D+S  A+E +K+    N +    + + S+ +S
Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLTANALEG--EVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPY 174
            + G FD+IVSNPP+
Sbjct: 257 DINGRFDMIVSNPPF 271


>gi|195978059|ref|YP_002123303.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868610|ref|YP_002744558.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225870431|ref|YP_002746378.1| methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|195974764|gb|ACG62290.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699835|emb|CAW93681.1| putative methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|225701886|emb|CAW99374.1| putative methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 209

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G + L+L K +   +   VDI+ +A+ +AK NA +N V       QS+ + 
Sbjct: 71  RLLDLGCGYGPLGLSLAK-AQGVEATLVDINHRAVGLAKQNAESNQVEATI--FQSNLYD 127

Query: 160 SVEGLFDVIVSNPP 173
            V G F+ I+SNPP
Sbjct: 128 GVTGTFEHIISNPP 141


>gi|238758556|ref|ZP_04619732.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae
           ATCC 35236]
 gi|238703256|gb|EEP95797.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae
           ATCC 35236]
          Length = 347

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++SP  K    D+S  A+E +++    N +  +   + S+ ++ 
Sbjct: 200 VLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQ--VIASNVYTD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|227549121|ref|ZP_03979170.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078818|gb|EEI16781.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291]
          Length = 518

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R+LDLGTG+G   +A  + S   + V  D+  +ALE+A++    N V    +  +  W
Sbjct: 162 VERVLDLGTGSGVQAIA--QSSCAVEVVATDVHPRALELAEATLAANAV-RNVELREGSW 218

Query: 158 FSSVEG-LFDVIVSNPPYI 175
           F  V G  FD IV+NPP++
Sbjct: 219 FEPVAGERFDRIVANPPFV 237


>gi|160935001|ref|ZP_02082387.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753]
 gi|156866454|gb|EDO59826.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753]
          Length = 306

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 44/185 (23%)

Query: 54  ILGWRDFYN---------VRLTLSSDTFEPRPETELLVDSALAFS----------LPRIE 94
           I  W+ +++         +R T   + ++P+  T L ++  LAF           L  +E
Sbjct: 106 INNWKQYFHPIPVGEKLLIRPTWE-EAYDPQGRTVLHLEPGLAFGTGTHETTRLCLELLE 164

Query: 95  K--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           K  +  + +LD+G G+G + +A L      K VGVDI   A++ A  NA TNGV E+F  
Sbjct: 165 KYLKPGMSLLDVGCGSGILSVAGLLLGAE-KAVGVDIDALAVKTAGENAQTNGVEEKFQG 223

Query: 153 LQSDWFSSVEGLFDVIVSN--------------------PPYIESVIVDCLGLEVRD-FD 191
           +  +    V G ++++V+N                      Y+ S I+D    EVRD  +
Sbjct: 224 ICGNLTDQVAGKYELVVANIVADIIILLTKDITRYLNPDSIYLMSGIIDTRVQEVRDALE 283

Query: 192 PRISL 196
           PR ++
Sbjct: 284 PRFTI 288


>gi|188532753|ref|YP_001906550.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia tasmaniensis
           Et1/99]
 gi|226712953|sp|B2VH94|RSMC_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|188027795|emb|CAO95652.1| Ribosomal RNA small subunit methyltransferase C [Erwinia
           tasmaniensis Et1/99]
          Length = 342

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 53/213 (24%)

Query: 64  RLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLG 105
           R T  +DTF +  P  EL V +     LP +  RD +                 ++LD+G
Sbjct: 150 RPTFDADTFWDEYPLGELTVKT-----LPGVFSRDGLDIGSQLLLSTLKPHMKGKVLDVG 204

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S + G F
Sbjct: 205 CGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVYSDISGRF 262

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---- 221
           D+I+SNPP+ + V              + SLD         +T+  G   HLN  G    
Sbjct: 263 DMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNTGGELRI 301

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
           + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 302 VANAFLPYPQVLD--ETFGSHEVLLQNGRFKVY 332


>gi|323335826|gb|EGA77105.1| Mtq1p [Saccharomyces cerevisiae Vin13]
          Length = 314

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+ + K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIXLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGID 201
           S          D++  NPPYI     +  +   V+ F+PR++L G ++
Sbjct: 172 SKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGELE 219


>gi|15902787|ref|NP_358337.1| hypothetical protein spr0743 [Streptococcus pneumoniae R6]
 gi|116516099|ref|YP_816227.1| methyltransferase small subunit [Streptococcus pneumoniae D39]
 gi|15458336|gb|AAK99547.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076675|gb|ABJ54395.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           D39]
          Length = 196

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N    +    QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGHFDHVISNPP 130


>gi|311748643|ref|ZP_07722428.1| putative transferase [Algoriphagus sp. PR1]
 gi|126577169|gb|EAZ81417.1| putative transferase [Algoriphagus sp. PR1]
          Length = 236

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 10/142 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG + L L +         V++  KA E AKSN   +  S R    + ++ S
Sbjct: 40  RILDVGTGTGVIALMLAQRYRESFLTAVELDEKAAEQAKSNFKESPFSNRMKLWKGEFQS 99

Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +  FD+IVSNPPY          L+ +D     +L    D LS ++ +    S  + 
Sbjct: 100 YQSDEKFDMIVSNPPYFPD------HLKAKDSQRNQALH--TDALS-FKDLVSKASSLIT 150

Query: 219 KDGLCSVEIGYNQKVDVVRIFE 240
           +DG   V +   Q  D ++I E
Sbjct: 151 EDGNFWVILPPRQMQDFIQITE 172


>gi|255532860|ref|YP_003093232.1| methyltransferase small [Pedobacter heparinus DSM 2366]
 gi|262828558|sp|C6Y2G0|TRMN6_PEDHD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|255345844|gb|ACU05170.1| methyltransferase small [Pedobacter heparinus DSM 2366]
          Length = 234

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +   ILD+GTGTG + L L +  P      V+I  +A   A  NA+    S R   L 
Sbjct: 34  KNEAANILDIGTGTGVIALMLAQRFPNALVDAVEIDEQAALTATKNALNAPFSGRLKVLH 93

Query: 155 S---DWFSSVEGLFDVIVSNPPY 174
           S   D+    E  +D+IVSNPPY
Sbjct: 94  SAIEDYLP--EKYYDLIVSNPPY 114


>gi|156973272|ref|YP_001444179.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116]
 gi|262828794|sp|A7MXM2|TRMN6_VIBHB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|156524866|gb|ABU69952.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116]
          Length = 239

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+GTGTG + L   +  P  +   +DI   A+E AK N   +  S+R     SD   
Sbjct: 45  KILDIGTGTGLLALMCAQRFPSAQITALDIEITAIEAAKQNFAQSTWSDRLSLHHSDVLQ 104

Query: 160 -SVEGLFDVIVSNPPYIES 177
              E  F+ I+ NPPY  S
Sbjct: 105 FEPEHRFERIICNPPYFNS 123


>gi|255102757|ref|ZP_05331734.1| hypothetical protein CdifQCD-6_18241 [Clostridium difficile
           QCD-63q42]
          Length = 248

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175
             NG+ ER + +  D  +   V  +  + V+ SNPPY+
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125


>gi|148986069|ref|ZP_01819090.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|148992507|ref|ZP_01822202.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|149004045|ref|ZP_01828851.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|149021705|ref|ZP_01835736.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|147757946|gb|EDK64954.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|147921903|gb|EDK73029.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|147928824|gb|EDK79837.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|147930166|gb|EDK81152.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGHFDHVISNPP 130


>gi|322375416|ref|ZP_08049929.1| methyltransferase domain protein [Streptococcus sp. C300]
 gi|321279679|gb|EFX56719.1| methyltransferase domain protein [Streptococcus sp. C300]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLAQQNAERNKVEATI--FQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGKFDHVISNPP 130


>gi|291520312|emb|CBK75533.1| Predicted O-methyltransferase [Butyrivibrio fibrisolvens 16/4]
          Length = 250

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 56/98 (57%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  ++++ +V   LDLGTGTG + + L  ++      G++I  ++ E+A  + 
Sbjct: 32  MDAVLLSSFAKVKEGEVA--LDLGTGTGILPILLEAKTGGAHFTGLEIQPESAEMANRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
           + NG+ ++ D ++ D   + +    G  +V+ SNPPY+
Sbjct: 90  LLNGLEDKIDIIEGDIKEAAQIFGKGSMNVVTSNPPYM 127


>gi|126660340|ref|ZP_01731453.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110]
 gi|126618371|gb|EAZ89127.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110]
          Length = 401

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   R+ +RILD G GTG     L+  +P  + VGVDIS KALEIA+     
Sbjct: 41  AAYNFCTGRKPPRENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAEKRCQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+        F  L  +    +EG FD+I
Sbjct: 101 SGVATNHNYPISFHHLPLEEAEKIEGEFDLI 131


>gi|67590136|ref|XP_665463.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656165|gb|EAL35233.1| hypothetical protein Chro.40428 [Cryptosporidium hominis]
          Length = 254

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 12/144 (8%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-------ESPFF 122
           + +EP  E   L++ AL      I K     I ++G G+G +   LLK       E P  
Sbjct: 14  NVYEPS-EDSFLMEDALILEKNEILKVKPRLICEIGCGSGYLTACLLKIIKESDAEFPLP 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179
               VD++ KALE+++     N ++   + ++   F+ +    GLF++I+ NPPY+ S  
Sbjct: 73  ISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSSN 132

Query: 180 VDCLGLEVRDFDPRISLDGGIDGL 203
            D L   + +     +  GG++GL
Sbjct: 133 KD-LNQSILNCGIDSAWSGGVNGL 155


>gi|270296757|ref|ZP_06202956.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317480115|ref|ZP_07939225.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
 gi|270272744|gb|EFA18607.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903662|gb|EFV25506.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
          Length = 235

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG + L L + +P  +   ++I   A   A  N   +  ++R + +  D+  
Sbjct: 40  RILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVEIICHDFRD 99

Query: 160 -SVEGLFDVIVSNPPY 174
              E  FD+IVSNPPY
Sbjct: 100 YQPENRFDLIVSNPPY 115


>gi|237723643|ref|ZP_04554124.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437991|gb|EEO48068.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 234

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ILD+GTGTG + L ++ +    +   VDI   A+E A+ N   +   +R +  LQ     
Sbjct: 41  ILDVGTGTGLISL-MMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E LFDVIVSNPPY      D L    R  +     D     L  +  +A+  +R L+ 
Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFAKLAESAARLLHS 150

Query: 220 DGLCSVEIGYNQK 232
           +G+ SV I  + K
Sbjct: 151 EGVFSVIIPADGK 163


>gi|237744391|ref|ZP_04574872.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|229431620|gb|EEO41832.1| methyltransferase [Fusobacterium sp. 7_1]
          Length = 243

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F         +DS L     +I+K +  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIVQRSDYFN------FSIDSLLISEFIKIQK-NTKKILDLGTGNAAIPLFLSKKTSA 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            K  G++I   + ++A  N   N + E+    +D +++       G FD+IVSNPP+ +
Sbjct: 68  -KIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFK 125


>gi|322411856|gb|EFY02764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 210

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDLG G G + ++L K     +   VDI+ +A+++AK NA  N V+      QS+ + 
Sbjct: 71  RILDLGCGYGPLGISLAKVQDV-EATLVDINNRAIDLAKKNARQNQVN--VTIFQSNIYE 127

Query: 160 SVEGLFDVIVSNPP 173
           +V G F+ I+SNPP
Sbjct: 128 NVRGSFNHIISNPP 141


>gi|301155995|emb|CBW15465.1| 16S rRNA m2G1207 methylase [Haemophilus parainfluenzae T3T1]
          Length = 330

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   + K  P       DI   A++ A+     N +  R   + SD FS
Sbjct: 193 KVLDVGCGAGVIGSMIKKHHPKADVTMTDIHAMAIQSARQTLAENQLEGR--VIASDVFS 250

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +EG FD+I+SNPP+ + V
Sbjct: 251 HIEGKFDLIISNPPFHDGV 269


>gi|253744678|gb|EET00845.1| DNA methyltransferase [Giardia intestinalis ATCC 50581]
          Length = 228

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 24/174 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+    S   ++ +  V I   G+G+G V + + +  P
Sbjct: 5   YKATLDDCKHVYLPDEDTFLLIDTLTKLS-KELQPQSFVEI---GSGSGVVSVHIFQVFP 60

Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVS---------ERFDTLQSDWFSSVEGLFDVIVS 170
              +G  +DIS  A+++ +  A  N V          E  DT ++D+  +    FD+IV 
Sbjct: 61  KILEGHAIDISPYAVDMTRRTAALNNVPLLVHEGSFFEPLDT-RTDYPETAR--FDLIVF 117

Query: 171 NPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           NPPY+ S+  D       D  P  ++L GG +G        + +  HL  DG C
Sbjct: 118 NPPYVPSLETD------PDLGPLDLALAGGKNGSEIILQFLETLPSHLAVDGCC 165


>gi|227329779|ref|ZP_03833803.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 349

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L K+SP  +    D+S  A+E +K+    N +      + S+ +S
Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLAANALEG--SVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPY 174
            ++G FD+IVSNPP+
Sbjct: 257 DIDGRFDMIVSNPPF 271


>gi|307731153|ref|YP_003908377.1| methyltransferase small [Burkholderia sp. CCGE1003]
 gi|307585688|gb|ADN59086.1| methyltransferase small [Burkholderia sp. CCGE1003]
          Length = 375

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  D+GTGTG V  ALL +    K V  D   +AL  A+ N    G  ++ D +Q+D F 
Sbjct: 198 KAFDVGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLARLGYGQQVDVVQADLFP 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             EG   ++V NPP++ +     +   V D D R+ L G ++GL+ +
Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEHAVFDPDSRMLL-GFLNGLADH 300


>gi|260578867|ref|ZP_05846773.1| transferase [Corynebacterium jeikeium ATCC 43734]
 gi|258603014|gb|EEW16285.1| transferase [Corynebacterium jeikeium ATCC 43734]
          Length = 469

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 19/145 (13%)

Query: 99  VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS 155
            R+LDLGTG+G  A+ LA   E    K  G DI  +AL  A+  A   G+ S   + +Q 
Sbjct: 85  ARVLDLGTGSGVLALVLAANAEVEPPKIFGSDIHARALNYARVAAAAQGLDSPLVNWVQG 144

Query: 156 DWF-----------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            WF           S+    FDVIV+NPP++    VD   LE  +    +  D G+   +
Sbjct: 145 SWFEPFSAESADTESTEAQRFDVIVANPPFVIGPSVD---LEAEEG--HVYRDSGLPLDA 199

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGY 229
             + + +   +HL   G   + IG+
Sbjct: 200 ASQLVVEQSVQHLAPGGHAHLLIGW 224


>gi|149010531|ref|ZP_01831902.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           SP19-BS75]
 gi|147765012|gb|EDK71941.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           SP19-BS75]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGHFDHVISNPP 130


>gi|260494056|ref|ZP_05814187.1| methyltransferase [Fusobacterium sp. 3_1_33]
 gi|260198202|gb|EEW95718.1| methyltransferase [Fusobacterium sp. 3_1_33]
          Length = 243

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 12/119 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F         +DS L     +I+K +  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIVQRSDYFN------FSIDSLLISEFIKIQK-NTKKILDLGTGNAAIPLFLSKKTSA 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            K  G++I   + ++A  N   N + E+    +D +++       G FD+IVSNPP+ +
Sbjct: 68  -KIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFK 125


>gi|330686234|gb|EGG97846.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU121]
          Length = 202

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L  + P   K     I D+G G G + L + K SP      +D++ +ALE+A
Sbjct: 45  SDLLIQTFLKANPPGPSKT----IADVGCGYGPIGLMIAKVSPHHHITMLDVNRRALELA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
           K N   N + E  D  +SD  + V+   FD +++NPP
Sbjct: 101 KKNKKKNHI-ENADIFESDGMTQVDNNQFDFVLTNPP 136


>gi|307127610|ref|YP_003879641.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 670-6B]
 gi|301801668|emb|CBW34371.1| putative methyltransferase [Streptococcus pneumoniae INV200]
 gi|306484672|gb|ADM91541.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 670-6B]
 gi|332077252|gb|EGI87714.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17545]
          Length = 193

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGHFDHVISNPP 127


>gi|254977171|ref|ZP_05273643.1| hypothetical protein CdifQC_17743 [Clostridium difficile QCD-66c26]
 gi|255094501|ref|ZP_05323979.1| hypothetical protein CdifC_17856 [Clostridium difficile CIP 107932]
 gi|255316252|ref|ZP_05357835.1| hypothetical protein CdifQCD-7_17939 [Clostridium difficile
           QCD-76w55]
 gi|255518913|ref|ZP_05386589.1| hypothetical protein CdifQCD-_17478 [Clostridium difficile
           QCD-97b34]
 gi|255652092|ref|ZP_05398994.1| hypothetical protein CdifQCD_18040 [Clostridium difficile
           QCD-37x79]
 gi|260685065|ref|YP_003216350.1| hypothetical protein CD196_3336 [Clostridium difficile CD196]
 gi|260688723|ref|YP_003219857.1| hypothetical protein CDR20291_3382 [Clostridium difficile R20291]
 gi|306521826|ref|ZP_07408173.1| hypothetical protein CdifQ_20455 [Clostridium difficile QCD-32g58]
 gi|260211228|emb|CBA66742.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260214740|emb|CBE07425.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 248

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175
             NG+ ER + +  D  +   V  +  + V+ SNPPY+
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125


>gi|315222903|ref|ZP_07864782.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
 gi|315187853|gb|EFU21589.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
          Length = 197

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L+K     K   VDI+ +AL++A+ NA  N V       QS+ + +
Sbjct: 61  VLDVGCGYGTLGLTLIKAKEV-KATLVDINQRALDLARQNADRNQVLATI--FQSNIYQN 117

Query: 161 VEGLFDVIVSNPP 173
           VEG F  I+SNPP
Sbjct: 118 VEGRFHHIISNPP 130


>gi|311741861|ref|ZP_07715672.1| methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311314867|gb|EFQ84773.1| methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 212

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 15/142 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +L+L  G G + LA  +     +G   V V+I   A + A  NA T G+S+  +   +  
Sbjct: 50  MLELFAGVGHIGLAAARR----RGRILVQVEIDRWAAQFAHLNAETAGLSDLVEVRCAPV 105

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            S++  +  F +I+++PP++++ +V          DPR+ +DGG DGL   R   + +  
Sbjct: 106 ESALAPDEAFPLILADPPWVDAELV-----HQYPADPRLCIDGGADGLQLVRAALEVIGA 160

Query: 216 HLNKDGLCSVEIGYNQKVDVVR 237
           HL   GL  +++G  Q V  VR
Sbjct: 161 HLVTSGLAVLQVGPTQ-VPAVR 181


>gi|225858641|ref|YP_002740151.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 70585]
 gi|225721043|gb|ACO16897.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 70585]
          Length = 193

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGHFDHVISNPP 127


>gi|126701171|ref|YP_001090068.1| hypothetical protein CD3547 [Clostridium difficile 630]
 gi|255308578|ref|ZP_05352749.1| hypothetical protein CdifA_18451 [Clostridium difficile ATCC 43255]
 gi|115252608|emb|CAJ70451.1| putative methyltransferase [Clostridium difficile]
          Length = 248

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175
             NG+ ER + +  D  +   V  +  + V+ SNPPY+
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDINGYHVVTSNPPYM 125


>gi|183603300|ref|ZP_02713985.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae SP195]
 gi|225856507|ref|YP_002738018.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae P1031]
 gi|237650831|ref|ZP_04525083.1| methyltransferase small domain superfamily protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|183571845|gb|EDT92373.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae SP195]
 gi|225724345|gb|ACO20197.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae P1031]
 gi|301799838|emb|CBW32410.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
 gi|332073168|gb|EGI83647.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17570]
 gi|332076119|gb|EGI86585.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41301]
          Length = 193

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGHFDHVISNPP 127


>gi|182683753|ref|YP_001835500.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
 gi|303254023|ref|ZP_07340141.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
           BS455]
 gi|303260303|ref|ZP_07346274.1| hypothetical protein CGSSp9vBS293_03683 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261509|ref|ZP_07347457.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264177|ref|ZP_07350098.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
           BS397]
 gi|303267043|ref|ZP_07352915.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
           BS457]
 gi|303269195|ref|ZP_07354972.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
           BS458]
 gi|182629087|gb|ACB90035.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
 gi|302599003|gb|EFL66031.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
           BS455]
 gi|302637643|gb|EFL68130.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638627|gb|EFL69091.1| hypothetical protein CGSSpBS293_03683 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641259|gb|EFL71629.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
           BS458]
 gi|302643437|gb|EFL73712.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
           BS457]
 gi|302646582|gb|EFL76808.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
           BS397]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGHFDHVISNPP 130


>gi|315613342|ref|ZP_07888251.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
           49296]
 gi|315314577|gb|EFU62620.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
           49296]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +E      +LD+G G G + L+L K +   +   VDI+ +AL++A
Sbjct: 38  SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGLSLAK-AYGVQATMVDINNRALDLA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N +       QS+ +  VEG FD ++SNPP
Sbjct: 97  RQNAERNKIEATI--FQSNIYEQVEGKFDHVISNPP 130


>gi|330923634|ref|XP_003300318.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1]
 gi|311325606|gb|EFQ91583.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1]
          Length = 340

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 15/129 (11%)

Query: 58  RDFYNVRLTL--SSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R  Y V  +   SSD+    P+T L V     +A   P++       I+D+  G+GA  +
Sbjct: 96  RPLYYVHSSFPASSDSVFFGPDTYLFVSFLQNIARYFPQVPSS----IIDVCCGSGAGAI 151

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVI 168
            + +  P  K +G+D++ +AL +   NA   GV   F   +S+ +++V G       D+I
Sbjct: 152 HMARTYPRAKTLGLDLNPRALSMGNFNAQLAGVEISF--AESNLYAAVPGYMKSCGVDLI 209

Query: 169 VSNPPYIES 177
           VSNPPYI S
Sbjct: 210 VSNPPYIAS 218


>gi|306829680|ref|ZP_07462870.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
 gi|304428766|gb|EFM31856.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
          Length = 196

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAK-AYGAQATMVDINNRALDLAQQNAERNKVEATI--FQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 118 VEGKFDHVISNPP 130


>gi|167461259|ref|ZP_02326348.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381135|ref|ZP_08055138.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154711|gb|EFX46982.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 199

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILD+G G G + L   K  P      +DI+ +A+E+AK NA  N +S     LQS+ F
Sbjct: 59  ARILDVGCGYGPIGLTAAKLCPAGHVTLIDINERAVELAKLNARNNHISN-VTILQSNLF 117

Query: 159 SSV-EGLFDVIVSNPP 173
             V +  FDVI++NPP
Sbjct: 118 EHVRDQKFDVILTNPP 133


>gi|323477798|gb|ADX83036.1| methyltransferase small [Sulfolobus islandicus HVE10/4]
          Length = 186

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + L  ++P  K   VD++  A+++AK NA  NGV  R   L+SD F +
Sbjct: 49  VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108

Query: 161 --VEGLFDVIVSNPP 173
             V+  F+ I SNPP
Sbjct: 109 VPVDVKFNAIYSNPP 123


>gi|258626139|ref|ZP_05720987.1| HemK protein [Vibrio mimicus VM603]
 gi|258581494|gb|EEW06395.1| HemK protein [Vibrio mimicus VM603]
          Length = 103

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYIE         +VR F+P+ +L    +GL+  R I+    R L + G    E
Sbjct: 1   MIVSNPPYIEENDPHLNQGDVR-FEPKSALVAEENGLADIRYISTYAPRFLLEGGWLLFE 59

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            GY+Q   V  I        V   +DY GNDRV L
Sbjct: 60  HGYDQGEAVRTILRELGYQSVTTEQDYAGNDRVTL 94


>gi|148643433|ref|YP_001273946.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061]
 gi|222445675|ref|ZP_03608190.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349777|ref|ZP_05975194.1| putative methylase [Methanobrevibacter smithii DSM 2374]
 gi|148552450|gb|ABQ87578.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061]
 gi|222435240|gb|EEE42405.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860561|gb|EFC92859.1| putative methylase [Methanobrevibacter smithii DSM 2374]
          Length = 193

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 9/126 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++GTG+G V +   K +   K    DI+  ALE+AK N   N + E  + L  + F  
Sbjct: 34  VLEIGTGSGIVAMYASKLTK--KVTATDINFDALELAKKNFKLNNI-ENIELLFGNLFEP 90

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V+   FDVI+ N PY+ +        EV D +   + DGG+DG        + V  +LN 
Sbjct: 91  VKDRKFDVILFNTPYLPTE-----NDEVLDDNLNYAFDGGLDGRKVIDLFLNEVKNYLND 145

Query: 220 DGLCSV 225
            G+  +
Sbjct: 146 GGIVQL 151


>gi|89100359|ref|ZP_01173224.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911]
 gi|89084980|gb|EAR64116.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911]
          Length = 200

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LLV+   AF LP +E      ILD+G G G + L++ K  P      VD++ +A+E+A
Sbjct: 46  SRLLVE---AFKLPELEGN----ILDVGCGYGPIGLSIAKSFPERTVHMVDVNLRAIELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           K NA  N VS      +SD  + V  G F  I++NPP
Sbjct: 99  KENAAGNSVSNA-AIYESDRLTGVGGGKFAAILTNPP 134


>gi|300933613|ref|ZP_07148869.1| methylase of peptide chain release factors [Corynebacterium
           resistens DSM 45100]
          Length = 330

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 101/241 (41%), Gaps = 42/241 (17%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRD----------VVR 100
             I+G   F  V        F PRPETELLVD A   +L R +  RD           + 
Sbjct: 90  QHIVGAAVFDGVDFLCRPGGFIPRPETELLVDWAFHEALRRAKIHRDEATNSDDSSHCIS 149

Query: 101 ILDLGTGTGAVCLAL------LKESPFFKGVGVDISCKALEIAKSNA--------VTNGV 146
           ++DL TG G++ LAL        ++     +G+++   AL +A+ N         +++ V
Sbjct: 150 VVDLCTGPGSIALALACRFSDATQNALI--IGIELHEVALHLARDNEAQLRHRGLISDNV 207

Query: 147 SERFDTLQSDWFSSVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             RF  L+ D     E          DVIVSNPPY+ +     +G EV   DP  ++  G
Sbjct: 208 EVRF--LRCDLLDVEEVRKLPMGASPDVIVSNPPYVPTSA--PVGAEVL-HDPSDAVFAG 262

Query: 200 IDGLSHYRTI--ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
            DG+     +  A G+     + G+  +E         VR  E     +V   +D  G D
Sbjct: 263 SDGMDFLPGLLGALGIIAGGEEVGV-GIEHDDANGAATVRALEEAGARVVEQHQDVAGRD 321

Query: 258 R 258
           R
Sbjct: 322 R 322


>gi|302345345|ref|YP_003813698.1| methyltransferase small domain protein [Prevotella melaninogenica
           ATCC 25845]
 gi|302149227|gb|ADK95489.1| methyltransferase small domain protein [Prevotella melaninogenica
           ATCC 25845]
          Length = 236

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 20/154 (12%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
            RILD+GTGTG + L + +     +   ++I   ALE A  N   +  ++R + L S   
Sbjct: 34  TRILDIGTGTGLIALMMAQRFSTAQIDAIEIDKGALEDAHLNVSASPFNDRINILNSSLQ 93

Query: 156 DWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D+     +  EG++D IV NPPY  + + + L         + +     D LSH   I  
Sbjct: 94  DYIPCSETQEEGIYDAIVCNPPYFINSLKNPL--------QQRTTARHTDTLSHQELIYH 145

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              R L  +G  SV I Y+ K     I E+  +F
Sbjct: 146 S-KRLLKANGTLSVIIPYDNK----DILEAEAIF 174


>gi|259907286|ref|YP_002647642.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia pyrifoliae
           Ep1/96]
 gi|224962908|emb|CAX54389.1| Ribosomal RNA small subunit methyltransferase C [Erwinia pyrifoliae
           Ep1/96]
          Length = 342

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 199 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLTANQLEG--DVFASNVYS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 257 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 295

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 296 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 332


>gi|212693330|ref|ZP_03301458.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855]
 gi|237710069|ref|ZP_04540550.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|212664095|gb|EEB24667.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855]
 gi|229456162|gb|EEO61883.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 234

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ILD+GTGTG + L ++ +    +   VDI   A+E A+ N   +   +R +  LQ     
Sbjct: 41  ILDVGTGTGLISL-MMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E LFDVIVSNPPY      D L    R  +     D     L  +  +A+  +R L+ 
Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFDKLAESAARLLHS 150

Query: 220 DGLCSVEIGYNQK 232
           +G+ SV I  + K
Sbjct: 151 EGVFSVIIPADGK 163


>gi|295698693|ref|YP_003603348.1| hypothetical adenine-specific methylase [Candidatus Riesia
           pediculicola USDA]
 gi|291157085|gb|ADD79530.1| hypothetical adenine-specific methylase [Candidatus Riesia
           pediculicola USDA]
          Length = 119

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + SD F+S+    +D+I++NPPY++   +  L  E +  +P ISL  G DGL   + I  
Sbjct: 2   IHSDLFTSIPPKKYDLIITNPPYVDQKTLGMLPKEYQ-MEPVISLRAGEDGLKFIKKILR 60

Query: 212 GVSRHLNKDGLCSVEIGYN 230
             S  LN++GL   E+G N
Sbjct: 61  YSSYFLNENGLLICEVGEN 79


>gi|257437590|ref|ZP_05613345.1| ribosomal protein L11 methyltransferase [Faecalibacterium
           prausnitzii A2-165]
 gi|257199897|gb|EEU98181.1| ribosomal protein L11 methyltransferase [Faecalibacterium
           prausnitzii A2-165]
          Length = 304

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEK------------RD 97
           GWR +Y+      RL +     E   +  +L++D  LAF     E             R 
Sbjct: 108 GWRKYYHPMDIGKRLAIVPSWQEYDTDRVKLILDPGLAFGTGGHETTSLCLEALDERVRG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A LK        GVDI   A+  A  NA  NGV+++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIAALKLGAG-SAEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGRYDIITAN 240


>gi|301168613|emb|CBW28203.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae 10810]
          Length = 330

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K +P  +    DI   ALE A+     N +  + +   SD FS +E  FD+I+SNPP+
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQL--QGEVYASDVFSDIEEKFDLIISNPPF 265


>gi|183603138|ref|ZP_02964308.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571063|gb|EDT91591.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1087-00]
 gi|332202695|gb|EGJ16764.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41317]
          Length = 193

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K +   +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLAK-AYGVQATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGHFDHVISNPP 127


>gi|310765221|gb|ADP10171.1| Ribosomal RNA small subunit methyltransferase [Erwinia sp. Ejp617]
          Length = 384

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 241 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVYS 298

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 299 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 337

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 338 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 374


>gi|254773433|ref|ZP_05214949.1| methylase, putative [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 220

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 15/139 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + ++P+ ++ LLVD      L  I  R   R+LDL TG+G V +A   E         
Sbjct: 4   AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 57

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183
           D    A++ A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +    ++D L
Sbjct: 58  DKCPHAVQCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 115

Query: 184 GLEVRDFDPRISLDGGIDG 202
           G       P  + + G DG
Sbjct: 116 GPVT---GPSWAWNAGRDG 131


>gi|39995743|ref|NP_951694.1| hypothetical protein GSU0637 [Geobacter sulfurreducens PCA]
 gi|39982507|gb|AAR33967.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504754|gb|ADI83477.1| O-methyltransferase, putative [Geobacter sulfurreducens KN400]
          Length = 258

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 12/83 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +DLGTG+G + L L +  P    VGV+   +   +A+ N   NG++ER   L+ D   
Sbjct: 49  RGIDLGTGSGIIPLVLARRCPGSTFVGVEFQERMAHLAERNVHLNGLAERIAILRED--- 105

Query: 160 SVEGL--------FDVIVSNPPY 174
            V GL        FD+++SNPPY
Sbjct: 106 -VLGLRRRFPVSSFDLVLSNPPY 127


>gi|301793981|emb|CBW36379.1| putative methyltransferase [Streptococcus pneumoniae INV104]
          Length = 193

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ +  
Sbjct: 58  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYEQ 114

Query: 161 VEGLFDVIVSNPP 173
           VEG FD ++SNPP
Sbjct: 115 VEGHFDHVISNPP 127


>gi|114561726|ref|YP_749239.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella frigidimarina
           NCIMB 400]
 gi|122300833|sp|Q088B4|RSMC_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|114333019|gb|ABI70401.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella frigidimarina
           NCIMB 400]
          Length = 345

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 16/149 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK +P      +DI+  AL   +     N +  +     SD F+
Sbjct: 208 RVLDFGCGAGVITAALLKANPELTIECIDINAMALLSCELTLAANSMQAK--VYPSDGFN 265

Query: 160 SVEGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            + G FD I+SNPP+ + +    D     V+    R++ +G       ++ +A+   RHL
Sbjct: 266 QITGKFDGIISNPPFHDGLTSTTDIATQFVQQSAIRLTSNGI------WQIVAN---RHL 316

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 +   G   KV+VV      KL+L
Sbjct: 317 PYSETIATHFG---KVNVVAENNKYKLYL 342


>gi|16081280|ref|NP_393592.1| N-methyl-transferase related protein [Thermoplasma acidophilum DSM
           1728]
 gi|10639259|emb|CAC11261.1| N-methyl-transferase related protein [Thermoplasma acidophilum]
          Length = 182

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + +++G GTG V +  LK     + V  DIS  A+E AK NA  NG++ +    +SD FS
Sbjct: 33  KAIEIGCGTGIVSICFLKRGCDIEAV--DISDLAVECAKDNASRNGLTLK--VYRSDLFS 88

Query: 160 SVEGLFDVIVSNPPYI 175
            V G +D I+ N PYI
Sbjct: 89  GVSGTYDTILFNAPYI 104


>gi|227827979|ref|YP_002829759.1| methyltransferase small [Sulfolobus islandicus M.14.25]
 gi|227830702|ref|YP_002832482.1| methyltransferase [Sulfolobus islandicus L.S.2.15]
 gi|229581727|ref|YP_002840126.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51]
 gi|229585246|ref|YP_002843748.1| methyltransferase small [Sulfolobus islandicus M.16.27]
 gi|238620205|ref|YP_002915031.1| methyltransferase small [Sulfolobus islandicus M.16.4]
 gi|284998227|ref|YP_003419994.1| methyltransferase small [Sulfolobus islandicus L.D.8.5]
 gi|227457150|gb|ACP35837.1| methyltransferase small [Sulfolobus islandicus L.S.2.15]
 gi|227459775|gb|ACP38461.1| methyltransferase small [Sulfolobus islandicus M.14.25]
 gi|228012443|gb|ACP48204.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51]
 gi|228020296|gb|ACP55703.1| methyltransferase small [Sulfolobus islandicus M.16.27]
 gi|238381275|gb|ACR42363.1| methyltransferase small [Sulfolobus islandicus M.16.4]
 gi|284446122|gb|ADB87624.1| methyltransferase small [Sulfolobus islandicus L.D.8.5]
          Length = 186

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + L  ++P  K   VD++  A+++AK NA  NGV  R   L+SD F +
Sbjct: 49  VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108

Query: 161 --VEGLFDVIVSNPP 173
             V+  F+ I SNPP
Sbjct: 109 VPVDVKFNAIYSNPP 123


>gi|309972854|gb|ADO96055.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2846]
          Length = 330

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   ++LDLG G G +   + K S   +    DI   ALE A    
Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIKKSSTNAQITMTDIHAMALESAHKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +  + +   SD FS +EG FD+I+SNPP+ + +
Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269


>gi|281424314|ref|ZP_06255227.1| SmtA protein [Prevotella oris F0302]
 gi|281401583|gb|EFB32414.1| SmtA protein [Prevotella oris F0302]
          Length = 231

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LD+GTGTG + L L +  P  K   +DI+ +A   AK N   +  + +    Q+    
Sbjct: 38  RVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQTSLQE 97

Query: 158 FSSVEGLFDVIVSNPPYI 175
           F S E  FD IVSNPP+ 
Sbjct: 98  FESAE-RFDCIVSNPPFF 114


>gi|68248563|ref|YP_247675.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           86-028NP]
 gi|81337010|sp|Q4QPN2|RSMC_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|68056762|gb|AAX87015.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae 86-028NP]
          Length = 330

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  I+ +   ++LDLG G G +   + K S   +    DI   ALE A    
Sbjct: 175 LDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIKKSSTNAQITMTDIHAMALESAHKTL 234

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             N +  + +   SD FS +EG FD+I+SNPP+ + +
Sbjct: 235 SENQL--QGEVYASDVFSDIEGKFDLIISNPPFHDGI 269


>gi|332524054|ref|ZP_08400306.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315318|gb|EGJ28303.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 196

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 9/76 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG---VDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LD+G G G + +AL K     +GV    +DI+ +A+E+AK NA  N V       QS+ 
Sbjct: 61  LLDVGCGYGPLGIALAKT----QGVSATLIDINNRAIELAKKNATYNEV--EVTIYQSNI 114

Query: 158 FSSVEGLFDVIVSNPP 173
           + +V G FD I+SNPP
Sbjct: 115 YENVTGQFDHIISNPP 130


>gi|116333247|ref|YP_794774.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367]
 gi|116098594|gb|ABJ63743.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367]
          Length = 203

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG G + LAL K  P  +   VD++  ALE+A+ NA  N + E  +   SD +  V
Sbjct: 64  LDLGTGYGPIGLALAKRWPDRQVTMVDVNELALELARKNATANQI-ENVEIKTSDIYDQV 122

Query: 162 EGLFDVIVSNPP 173
              +  I++NPP
Sbjct: 123 TQRYAAILTNPP 134


>gi|86157207|ref|YP_463992.1| methyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773718|gb|ABC80555.1| Methyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 382

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R  D+GTGTG   LAL+      + +  D+  +A+  A+ NA   G++ + + +++D F 
Sbjct: 207 RAFDVGTGTG--VLALVLARAGARVIATDLEPRAVACARENAARLGLAGQVEVVEADLFP 264

Query: 160 SVEGLFDVIVSNPPYIES 177
             EG+ DVIV NPP+I +
Sbjct: 265 --EGVADVIVCNPPWIPA 280


>gi|325264822|ref|ZP_08131550.1| SAM-dependent methyltransferase [Clostridium sp. D5]
 gi|324029811|gb|EGB91098.1| SAM-dependent methyltransferase [Clostridium sp. D5]
          Length = 239

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R++K + V  LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  IDAVLLSDFVRVKKDETV--LDLGTGTGILPILLAAKTRGKHFTGLEIQAESADMAERSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
             N + ++ D +  D   + E      FDVIV+NPPY+ S
Sbjct: 90  EHNRLGDQIDIVTGDIKEAAEIFRPAFFDVIVTNPPYMLS 129


>gi|94990567|ref|YP_598667.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10270]
 gi|94544075|gb|ABF34123.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A
Sbjct: 49  SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 107

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 108 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141


>gi|305662621|ref|YP_003858909.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
 gi|304377190|gb|ADM27029.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
          Length = 198

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           R+LDLG G GA+ + +   +P  +   VDI+ +A+ +A+ N + N +  +R    Q + +
Sbjct: 59  RVLDLGCGYGAIGIVVALLNPKLEVYMVDINREAVRLAERNVIRNKIDPQRIKIFQGNLY 118

Query: 159 SSVEG-LFDVIVSNPPY 174
             V+  LF+ I SNPPY
Sbjct: 119 EPVKDILFNAIYSNPPY 135


>gi|117620051|ref|YP_858250.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|226712986|sp|A0KPP9|RSMC_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|117561458|gb|ABK38406.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 342

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           SLP ++      +LD G G G +   L K +P  K   VDI+  ALE ++     NG+  
Sbjct: 198 SLPAMQGS----LLDFGCGAGVIGSVLAKRNPGLKVTMVDINALALESSRRTLAINGL-- 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + +   SD +S ++G F  IVSNPP+
Sbjct: 252 QGEVWASDVYSDIQGKFGRIVSNPPF 277


>gi|311896978|dbj|BAJ29386.1| hypothetical protein KSE_35810 [Kitasatospora setae KM-6054]
          Length = 516

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V  +LDLG+G+G   L   + +   +    D++ +AL   +  A  +G  ER +T +
Sbjct: 175 RRPVREVLDLGSGSGVQALHAARHAQ--RVTATDLNPRALHFTRLTAALSGF-ERVETAE 231

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              +  V +  FD+IVSNPP++ S            F  R   DGG+ G    R++  G 
Sbjct: 232 GSLYEPVGDRRFDLIVSNPPFVIS--------PAGRFTYR---DGGMAGDELCRSVVRGA 280

Query: 214 SRHLNKDGLCSV 225
           + HL   G C +
Sbjct: 281 AAHLEPGGYCQL 292


>gi|256397545|ref|YP_003119109.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
 gi|256363771|gb|ACU77268.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
          Length = 496

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 10/125 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG G   L L   +   + VG D + +AL++A+     +GV   FD  +   F  V
Sbjct: 152 LDVGTGGGVQALHL--STHVERVVGSDRNPRALKLARLTQQLSGVGP-FDLREGSLFEPV 208

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           EG  FD++VSNPP+   VI    G +   F   +  D G+      R +     RHL +D
Sbjct: 209 EGERFDLVVSNPPF---VISPDNGAQGGRF---VYRDSGLPADEVCRRLVSNAHRHLAED 262

Query: 221 GLCSV 225
           G C V
Sbjct: 263 GWCQV 267


>gi|295677830|ref|YP_003606354.1| methyltransferase small [Burkholderia sp. CCGE1002]
 gi|295437673|gb|ADG16843.1| methyltransferase small [Burkholderia sp. CCGE1002]
          Length = 374

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  ALL +    K V  D   +AL  A+ N    G + + + +Q+D F   +
Sbjct: 201 DIGTGTG-VLAALLAKRGVRKIVATDQDARALACARENLARLGYAGQVEVVQADLFP--D 257

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           G   ++V NPP++ +     L   V D D R+ L G ++GL+ + T
Sbjct: 258 GRAPLVVCNPPWVPARPASPLEYAVYDPDSRMLL-GFLNGLADHLT 302


>gi|119503187|ref|ZP_01625271.1| modification methylase, HemK family protein [marine gamma
           proteobacterium HTCC2080]
 gi|119460833|gb|EAW41924.1| modification methylase, HemK family protein [marine gamma
           proteobacterium HTCC2080]
          Length = 314

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGV 146
           P   +   +RI+D+  G G++ L     SP    + +DI   AL +A +N     + N +
Sbjct: 129 PWFNQATPLRIVDVCCGGGSLGLLAAYHSPESHVLLLDIDADALALAGTNRRDQGMGNTL 188

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             + D L++   SSV    D+I++NPPY+++  +  L  E    +PR++L  G DGL   
Sbjct: 189 CVQADLLEALAPSSV----DIILANPPYVDAEDMANLPQEYH-HEPRLALAAGDDGLDLV 243

Query: 207 RTIADGVSRHLNKDGLCSVEIG 228
             +    S  L+  G+  +E+G
Sbjct: 244 HRLLRQASLVLSPHGMLFLEVG 265


>gi|307709017|ref|ZP_07645477.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
 gi|307620353|gb|EFN99469.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
          Length = 193

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +E      +LD+G G G + L+L K +   +   VDI+ +AL++A+ N
Sbjct: 38  MVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGLSLAK-AFGVQATMVDINNRALDLAQQN 96

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V       QS+ +  VEG FD ++SNPP
Sbjct: 97  AERNKVEATI--FQSNIYEQVEGKFDHVISNPP 127


>gi|265753718|ref|ZP_06089073.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235432|gb|EEZ20956.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 234

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 11/133 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ILD+GTGTG + L ++ +    +   VDI   A+E A+ N   +   +R +  LQ     
Sbjct: 41  ILDVGTGTGLISL-IMAQRCNAQIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E LFDVIVSNPPY      D L    R  +     D     L  +  +A+  +R L+ 
Sbjct: 100 TSETLFDVIVSNPPY----FTDSLKCPERQRNIARHTD-----LLDFDKLAESAARLLHS 150

Query: 220 DGLCSVEIGYNQK 232
           +G+ SV I  + K
Sbjct: 151 EGVFSVIIPADGK 163


>gi|120597610|ref|YP_962184.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. W3-18-1]
 gi|146294251|ref|YP_001184675.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|226712993|sp|A1RG35|RSMC_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712998|sp|A4YA93|RSMC_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|120557703|gb|ABM23630.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. W3-18-1]
 gi|145565941|gb|ABP76876.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella putrefaciens
           CN-32]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|319427613|gb|ADV55687.1| methyltransferase small [Shewanella putrefaciens 200]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|71903581|ref|YP_280384.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS6180]
 gi|71802676|gb|AAX72029.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS6180]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A+ N
Sbjct: 52  MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 110

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 111 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141


>gi|71910757|ref|YP_282307.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|71853539|gb|AAZ51562.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS5005]
          Length = 195

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A
Sbjct: 38  SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 97  RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130


>gi|15675194|ref|NP_269368.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes M1
           GAS]
 gi|13622360|gb|AAK34089.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
          Length = 197

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A
Sbjct: 38  SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 96

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 97  RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130


>gi|50914279|ref|YP_060251.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10394]
 gi|94988677|ref|YP_596778.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94992500|ref|YP_600599.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94994489|ref|YP_602587.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|306827290|ref|ZP_07460577.1| methyltransferase domain protein [Streptococcus pyogenes ATCC
           10782]
 gi|50903353|gb|AAT87068.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10394]
 gi|94542185|gb|ABF32234.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94546008|gb|ABF36055.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94547997|gb|ABF38043.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|304430437|gb|EFM33459.1| methyltransferase domain protein [Streptococcus pyogenes ATCC
           10782]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 3/96 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A
Sbjct: 49  SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLA 107

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 108 RKNATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141


>gi|28895982|ref|NP_802332.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           SSI-1]
 gi|28811232|dbj|BAC64165.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 208

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A+ N
Sbjct: 52  MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 110

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 111 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 141


>gi|21910406|ref|NP_664674.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS315]
 gi|21904604|gb|AAM79477.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 197

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A+ N
Sbjct: 41  MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 99

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 100 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130


>gi|126175727|ref|YP_001051876.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS155]
 gi|226712988|sp|A3D8E4|RSMC_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|125998932|gb|ABN63007.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella baltica OS155]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|304411144|ref|ZP_07392759.1| methyltransferase small [Shewanella baltica OS183]
 gi|307306439|ref|ZP_07586182.1| methyltransferase small [Shewanella baltica BA175]
 gi|304350337|gb|EFM14740.1| methyltransferase small [Shewanella baltica OS183]
 gi|306910730|gb|EFN41158.1| methyltransferase small [Shewanella baltica BA175]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|283477104|emb|CAY73004.1| Ribosomal RNA small subunit methyltransferase [Erwinia pyrifoliae
           DSM 12163]
          Length = 447

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 304 KVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLTANQLEG--DVFASNVYS 361

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 362 DISGRFDMIISNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 400

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 401 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 437


>gi|152999345|ref|YP_001365026.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
 gi|217972021|ref|YP_002356772.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
 gi|226712989|sp|A6WJH4|RSMC_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|151363963|gb|ABS06963.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
 gi|217497156|gb|ACK45349.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|261820150|ref|YP_003258256.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           wasabiae WPP163]
 gi|261604163|gb|ACX86649.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium wasabiae
           WPP163]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L K+SP  +    D+S  A+E +K+    N +      + S+ +S
Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSKATLAANELEGA--VIASNVYS 256

Query: 160 SVEGLFDVIVSNPPY 174
            ++G FDVIVSNPP+
Sbjct: 257 DIDGRFDVIVSNPPF 271


>gi|312602239|ref|YP_004022084.1| methyltransferase [Burkholderia rhizoxinica HKI 454]
 gi|312169553|emb|CBW76565.1| Methyltransferase [Burkholderia rhizoxinica HKI 454]
          Length = 365

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           +PE    +D   A      E  +   +LD+G G+G + +  L        VG+D++ +A 
Sbjct: 123 QPEQLFFMDYTSA------EDLEQASVLDIGVGSGVLSIFCLLNGAT-SCVGLDVNPRAK 175

Query: 135 EIAKSNAVTNGVSERFDTL---QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +A  NA+ N + + FD      SD F+SV +  FD I SNPP+  +             
Sbjct: 176 ILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEPT---------PPGI 226

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D  ++   GI G+     I   + +HL  DG+  V
Sbjct: 227 DYYVNSAAGIYGMDFAEKILSNIDQHLTDDGMLQV 261


>gi|19746163|ref|NP_607299.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS8232]
 gi|139473697|ref|YP_001128413.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes str.
           Manfredo]
 gi|209559499|ref|YP_002285971.1| hypothetical protein Spy49_0976c [Streptococcus pyogenes NZ131]
 gi|19748342|gb|AAL97798.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|134271944|emb|CAM30182.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo]
 gi|209540700|gb|ACI61276.1| Conserved hypothetical protein [Streptococcus pyogenes NZ131]
          Length = 197

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VD      L  +  ++  R+LDLG G G + ++L K         VDI+ +AL++A+ N
Sbjct: 41  MVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAKVQRV-DATLVDINNRALDLARKN 99

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A  N V+      QS+ + ++ G F+ I+SNPP
Sbjct: 100 ATNNQVA--VTIFQSNIYENISGHFEHIISNPP 130


>gi|323475067|gb|ADX85673.1| methyltransferase small [Sulfolobus islandicus REY15A]
          Length = 186

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + L  ++P  K   VD++  A+++AK NA  NGV  R   L+SD F +
Sbjct: 49  VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKFNGVENRTIILKSDIFDN 108

Query: 161 --VEGLFDVIVSNPP 173
             V+  F+ I SNPP
Sbjct: 109 VPVDVKFNAIYSNPP 123


>gi|242240726|ref|YP_002988907.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya dadantii
           Ech703]
 gi|242132783|gb|ACS87085.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech703]
          Length = 344

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 23/140 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  +E     ++LD+  G G +     + SP  +    D+S  ALE +++  
Sbjct: 181 LDAGSQLLLSTLEAHRKGKVLDIACGAGVLASVFAQRSPKIRLTLSDVSAAALEASQATL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N +  +   L S+ +S + G FD+I+SNPP+                      DG   
Sbjct: 241 ASNQLEGQ--VLASNVYSDIVGRFDLIISNPPF---------------------HDGMQT 277

Query: 202 GLSHYRTIADGVSRHLNKDG 221
            L     +  G + HLN+DG
Sbjct: 278 SLHAAEMLIRGAASHLNQDG 297


>gi|167763063|ref|ZP_02435190.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
           43183]
 gi|167699403|gb|EDS15982.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
           43183]
          Length = 236

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +DV RILD+G G+G + L L + +P      V+I   A   A+ N  ++  S R + +  
Sbjct: 36  QDVKRILDVGAGSGLISLQLAQRNPEAVITSVEIDPAAAAQAQENIQSSPWSNRMEVVCC 95

Query: 156 DWFS-SVEGLFDVIVSNPPY 174
           D+     E  FD+IVSNPPY
Sbjct: 96  DFRKYHPEDKFDLIVSNPPY 115


>gi|167465651|ref|ZP_02330740.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 171

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILD+G G G + L   K  P      +DI+ +A+E+AK NA  N +S     LQS+ F
Sbjct: 59  ARILDVGCGYGPIGLTAAKLCPAGHVTLIDINERAVELAKLNARNNHISN-VTILQSNLF 117

Query: 159 SSV-EGLFDVIVSNPP 173
             V +  FDVI++NPP
Sbjct: 118 EHVRDQKFDVILTNPP 133


>gi|160873960|ref|YP_001553276.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
 gi|226712990|sp|A9L1V0|RSMC_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|160859482|gb|ABX48016.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
 gi|315266194|gb|ADT93047.1| methyltransferase small [Shewanella baltica OS678]
          Length = 347

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAK--VYPSDGLA 266

Query: 160 SVEGLFDVIVSNPPY 174
              G F+ I+SNPP+
Sbjct: 267 QTTGKFNGIISNPPF 281


>gi|329925612|ref|ZP_08280453.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
 gi|328939741|gb|EGG36083.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
          Length = 201

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LD+G G G + L   + +       +DI+ +A+E+AK NA  NG+      L+SD F
Sbjct: 60  AQVLDVGCGYGPIGLTAARMASQGHVTMIDINSRAVELAKENAKRNGII-NVTILESDLF 118

Query: 159 SSV-EGLFDVIVSNPP 173
            +V + LFDV+++NPP
Sbjct: 119 EAVKDQLFDVVLTNPP 134


>gi|291302530|ref|YP_003513808.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
 gi|290571750|gb|ADD44715.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
          Length = 481

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LD+GTG G +   L   +   +  G DIS +AL  A +NAV NG+   ++ L 
Sbjct: 145 RRPVESALDVGTGGGVLAFDLSGHAK--RVTGTDISRRALLFAATNAVLNGLD--WELLA 200

Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175
            D    V G  FD IVSNPP+I
Sbjct: 201 GDMLEPVAGRRFDQIVSNPPFI 222


>gi|299065279|emb|CBJ36447.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum CMR15]
          Length = 374

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + VG D   +AL  A  N    G+  + + +++D F   E
Sbjct: 201 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--E 257

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 258 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 300


>gi|257866490|ref|ZP_05646143.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257872995|ref|ZP_05652648.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257800448|gb|EEV29476.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257807159|gb|EEV35981.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
          Length = 203

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDLG G G V + L K  P       DIS  A+++   NA  N V+   + + S+ F 
Sbjct: 43  RILDLGCGYGFVGIYLAKRYPEAAVTMTDISANAIDLTTKNAQRNDVAP--EIVLSEGFK 100

Query: 160 SV-EGLFDVIVSNPPY 174
            + +  FDVI+SNPPY
Sbjct: 101 EISDKTFDVILSNPPY 116


>gi|300702626|ref|YP_003744226.1| methyltransferase [Ralstonia solanacearum CFBP2957]
 gi|299070287|emb|CBJ41579.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum CFBP2957]
          Length = 390

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + VG D   +AL  A+ N    G+  + + + +D F   E
Sbjct: 217 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACARENLARLGLQSQVEVIDADLFP--E 273

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 274 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 316


>gi|296109907|ref|YP_003616856.1| methyltransferase small [Methanocaldococcus infernus ME]
 gi|295434721|gb|ADG13892.1| methyltransferase small [Methanocaldococcus infernus ME]
          Length = 196

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      +  +E      ILDLG G GA+ +AL  E    K + VDI+ +AL++AK N 
Sbjct: 40  IDKGTKLLIETVEVNKEDEILDLGCGYGAIGIALADEVK--KVLMVDINRRALKLAKENV 97

Query: 142 VTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPP 173
             N +     RF    SD + +V+  FD I++NPP
Sbjct: 98  KLNNIKNAEVRF----SDLYENVDEKFDKIITNPP 128


>gi|145297572|ref|YP_001140413.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|226712987|sp|A4SIE3|RSMC_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|142850344|gb|ABO88665.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 342

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G G G +   L K +P  +   VDIS  ALE ++     NG+  +     SD +S
Sbjct: 205 ELLDFGCGAGVIGSVLAKRNPGLEVKMVDISALALESSRRTLAINGLQGQVQA--SDVYS 262

Query: 160 SVEGLFDVIVSNPPY 174
            + G FD IVSNPP+
Sbjct: 263 DITGKFDHIVSNPPF 277


>gi|327394850|dbj|BAK12272.1| O-methyltransferase YfiC [Pantoea ananatis AJ13355]
          Length = 311

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +P    V  V++   A + A  N   +  + R    Q D
Sbjct: 110 VKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARMQVHQQD 169

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIV 180
              W  + E  + +IVSNPPY +  + 
Sbjct: 170 IAQWAENCEARYSLIVSNPPYFDPGVA 196


>gi|312961598|ref|ZP_07776097.1| methyltransferase small [Pseudomonas fluorescens WH6]
 gi|311284139|gb|EFQ62721.1| methyltransferase small [Pseudomonas fluorescens WH6]
          Length = 314

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G G G   L + +     + + VDI+ +AL ++  NA   G+S      QSD  +S+
Sbjct: 139 VDIGCGAGVGALVIAQARHDAQVLAVDINPRALRMSAVNAELAGLSN-VRVYQSDLLASL 197

Query: 162 EGLFDVIVSNPPYI 175
           +G FD+IV+NPPY+
Sbjct: 198 DGTFDLIVANPPYM 211


>gi|293392981|ref|ZP_06637298.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424515|gb|EFE97727.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 290

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   +  L  ++K    ++LD+G G G +   + + SP  K    D++  A+E +++  
Sbjct: 123 LDVGSSLLLSTLDKHMKGKVLDVGCGAGVMASVMARMSPKVKLTLSDVNAAAIESSRATL 182

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
             NG+    + + S+ +S + G FD+I+SNPP+ + +       E 
Sbjct: 183 AANGIDG--EVIVSNVYSDISGRFDMIISNPPFHDGLATSLTAAET 226


>gi|260592206|ref|ZP_05857664.1| methyltransferase [Prevotella veroralis F0319]
 gi|260535840|gb|EEX18457.1| methyltransferase [Prevotella veroralis F0319]
          Length = 237

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 8/84 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           +RILD+GTGTG + L + +  P      ++I  KALE A  N  ++   +R   + S   
Sbjct: 34  MRILDIGTGTGLIALMMAQRFPQAHIDAIEIDPKALEDAHVNIESSPFHDRIKLIHSSLQ 93

Query: 157 ------WFSSVEGLFDVIVSNPPY 174
                 +  +V+ ++D I+SNPPY
Sbjct: 94  YYKPSLFPPNVDNVYDAIISNPPY 117


>gi|237809368|ref|YP_002893808.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
 gi|237501629|gb|ACQ94222.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
          Length = 350

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T+LL+DS  A S           ILD+G G G +  A+ + +P    V  D++  AL  A
Sbjct: 201 TQLLLDSLPALS---------GDILDVGCGAGVIGAAICQRTPDANVVMTDVNALALLSA 251

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 N +S +   + SD FS VE  FD I+SNPP+
Sbjct: 252 TKTLEGNNLSAQ--VIASDMFSDVEAKFDFIISNPPF 286


>gi|17547878|ref|NP_521280.1| hypothetical protein RSc3159 [Ralstonia solanacearum GMI1000]
 gi|17430184|emb|CAD16947.1| conserved hypothetical protein 1177;methyltransferase small
           [Ralstonia solanacearum GMI1000]
          Length = 376

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + VG D   +AL  A  N    G+  + + +++D F   E
Sbjct: 203 DIGTGTG-VLAAVLAKRGVKRVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--E 259

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G +DGL+ +
Sbjct: 260 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLDGLAAH 302


>gi|289523383|ref|ZP_06440237.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503075|gb|EFD24239.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 247

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSN 140
           VD+ L     R+  +D  R+++LGT +GAV L L K       + G+DI  + +EIA+ N
Sbjct: 30  VDTVLLSWFVRLRSKD--RVMELGTASGAVALILAKRWQKVSAIKGIDIQEELIEIAREN 87

Query: 141 AVTNGVSERFDTLQSD--WFSSV--EGLFDVIVSNPPYIES 177
           A+ N + ++    + D    S++     FD +V NPPY E+
Sbjct: 88  ALANDLEDKVTFERGDVREISAICPPQTFDAVVVNPPYDEA 128


>gi|218778577|ref|YP_002429895.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
 gi|218759961|gb|ACL02427.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
          Length = 251

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTG G + L L    P  K  GV+I      +A+ N   NG+ +R   ++ D   S
Sbjct: 52  IVDLGTGAGVIPLILTSLYPDIKVYGVEIQDSLAGLAERNVRENGLQDRISVIRHDLKKS 111

Query: 161 -VEGL---FDVIVSNPPY 174
            ++GL    D +VSNPPY
Sbjct: 112 PIQGLPKNIDYVVSNPPY 129


>gi|72160642|ref|YP_288299.1| hypothetical protein Tfu_0238 [Thermobifida fusca YX]
 gi|71914374|gb|AAZ54276.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 494

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 10/140 (7%)

Query: 43  VRSLKHESIHRILGW-----RDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +R  +  ++ +I  W     R +Y V  LT+     +PRP+  +    A A     I   
Sbjct: 94  IRDGQARALVQIKPWELADGRPYYTVSDLTVRPGQGQPRPDHVVGAGGASATLAQLIVDG 153

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V R LDLG+G G   L L + +   +    D++ +AL + + +   +GV +  +T Q  
Sbjct: 154 PVERALDLGSGCGVQSLHLAERA--TRVCATDVNPRALWMTRLSCALSGV-DNVETRQGS 210

Query: 157 WFSSVEG-LFDVIVSNPPYI 175
            +  V+G  FD+IVSNPP++
Sbjct: 211 LYEPVQGERFDLIVSNPPFV 230


>gi|172040386|ref|YP_001800100.1| methylase of peptide chain release factors [Corynebacterium
           urealyticum DSM 7109]
 gi|171851690|emb|CAQ04666.1| methylase of peptide chain release factors [Corynebacterium
           urealyticum DSM 7109]
          Length = 332

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 41/185 (22%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL----- 86
           D +     + ++R    E +  I+G   F+   L   +  F PRPETELL + AL     
Sbjct: 59  DPEPAIFADWVIRRAHREPLQHIVGAAPFFGYDLFSDARGFIPRPETELLTEYALGRIRS 118

Query: 87  ----AFSLPRIEKRD-VVRILDLGTGTGAVCLALLKE-SPFFKG---------------- 124
               A + P +   D +VRI+DL  G G + LAL  + + F +G                
Sbjct: 119 WLERAAAEPDLRPADGIVRIVDLCAGPGTIGLALAAQLTEFLRGQATASSADYRWLRTVE 178

Query: 125 -VGVDISCKALEIAKSNAV----TNGVSERFDT--LQSDWFS-------SVEGLFDVIVS 170
             G+++   A+E+ + N         + E+ D   ++ D           + G   ++V+
Sbjct: 179 ATGIELDPAAVELGQENLAYFRRAGLLGEQLDVRLVEGDVRDLEVLDTLGLAGRAQLVVA 238

Query: 171 NPPYI 175
           NPPY+
Sbjct: 239 NPPYV 243


>gi|291618454|ref|YP_003521196.1| YfiC [Pantoea ananatis LMG 20103]
 gi|291153484|gb|ADD78068.1| YfiC [Pantoea ananatis LMG 20103]
          Length = 311

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +P    V  V++   A + A  N   +  + R    Q D
Sbjct: 110 VKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARMQVHQQD 169

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIV 180
              W  + E  + +IVSNPPY +  + 
Sbjct: 170 IAQWAENCEARYSLIVSNPPYFDPGVA 196


>gi|255094437|ref|ZP_05323915.1| protein methyltransferase [Clostridium difficile CIP 107932]
          Length = 151

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 4/131 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  +  
Sbjct: 24  DTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMGLDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE LV+  +       EK+DV  ILD+GTG+GA+ ++L K     K +
Sbjct: 84  FVKEGVLIPRPDTETLVEEIIEICR---EKKDV-SILDIGTGSGAITISLAKYIENSKIM 139

Query: 126 GVDISCKALEI 136
             DIS  ALEI
Sbjct: 140 SFDISETALEI 150


>gi|295102911|emb|CBL00456.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Faecalibacterium prausnitzii L2-6]
          Length = 304

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEKRDVV---------- 99
           GWR +Y+           P  +       +L++D  LAF     E  ++           
Sbjct: 108 GWRKYYHPMDVGQRLAIVPSWQDYDTDRVKLILDPGLAFGTGGHETTNLCLEVLDERVKG 167

Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A LK        GVDI   A+  A  NA  NGV+++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIAALKLGAAV-AEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGKYDIITAN 240


>gi|282857422|ref|ZP_06266655.1| methyltransferase [Pyramidobacter piscolens W5455]
 gi|282584707|gb|EFB90042.1| methyltransferase [Pyramidobacter piscolens W5455]
          Length = 255

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDT- 152
           R   R+++LG   G V L L K  P  +  G+DI  + +E+A+ NA  NG++   RF+T 
Sbjct: 49  RPGERVIELGCAHGGVSLILAKRFPHSRFEGLDIQPRLIELARENAARNGLTANARFETG 108

Query: 153 -LQSDWFSSVEGLFDVIVSNPPY 174
            L+          FD +V NPPY
Sbjct: 109 DLREHRRLYEHQSFDAVVVNPPY 131


>gi|260584234|ref|ZP_05851982.1| methyltransferase [Granulicatella elegans ATCC 700633]
 gi|260158860|gb|EEW93928.1| methyltransferase [Granulicatella elegans ATCC 700633]
          Length = 202

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 56/97 (57%), Gaps = 7/97 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +ELL++S   + +P  E+     +LD+G G G + LA  K  P      +D++ +A+ +A
Sbjct: 46  SELLIES---YDVP--EQFQKASLLDIGCGYGTMGLAYGKAYPELSVEMIDVNERAILLA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           K NA  NG+    D  +S+ + +V +  +++I+SNPP
Sbjct: 101 KENAQKNGI-HNVDIHESNLYDAVKKSQYEIIISNPP 136


>gi|95930758|ref|ZP_01313491.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
 gi|95133238|gb|EAT14904.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
          Length = 272

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L  D  + R      +D  L     R  +R+  R++DLG G+  + L L +  P    V 
Sbjct: 30  LGVDIVQHRDGYRFSIDPVLLTDFCRPRQRE--RVVDLGCGSAVMALILARAFPSLSVVA 87

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPY 174
           +++    +  A+ + V NG+  R D  Q+D     S+  G FD++V NPP+
Sbjct: 88  LELQAAQVARARKSVVLNGLEGRIDVQQTDVREVPSAWHGDFDLVVCNPPF 138


>gi|25028365|ref|NP_738419.1| hypothetical protein CE1809 [Corynebacterium efficiens YS-314]
 gi|23493650|dbj|BAC18619.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 523

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L         R+LDLGTG+G   L     +        DI  +A
Sbjct: 147 PGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLGQAGSTTSI--TATDIHPRA 204

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A++  V +G+    + L+  WF  V G  FD I++NPP++  V    +G   RD   
Sbjct: 205 LDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFV--VGPPEIGHVYRDSG- 259

Query: 193 RISLDGGIDGLSHY--RTIADGVSRHLNKDGLCSVEIGYNQKV 233
            + LDG    +     R +A G + HL    + S  + + Q+V
Sbjct: 260 -MDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRV 301


>gi|259507422|ref|ZP_05750322.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314]
 gi|259164987|gb|EEW49541.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314]
          Length = 515

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L         R+LDLGTG+G   L     +        DI  +A
Sbjct: 139 PGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLGQAGSTTSI--TATDIHPRA 196

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A++  V +G+    + L+  WF  V G  FD I++NPP++  V    +G   RD   
Sbjct: 197 LDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFV--VGPPEIGHVYRDSG- 251

Query: 193 RISLDGGIDGLSHY--RTIADGVSRHLNKDGLCSVEIGYNQKV 233
            + LDG    +     R +A G + HL    + S  + + Q+V
Sbjct: 252 -MDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRV 293


>gi|261417598|ref|YP_003251280.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|261374055|gb|ACX76798.1| methyltransferase small [Geobacillus sp. Y412MC61]
          Length = 202

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  R T  S  F  R     T LL+++   F  P +       +LD+G G G + LAL K
Sbjct: 28  HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 80

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +V+NPP
Sbjct: 81  SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 136


>gi|193204212|ref|NP_494209.2| hypothetical protein C33C12.9 [Caenorhabditis elegans]
 gi|163644445|gb|AAB66061.3| Hypothetical protein C33C12.9 [Caenorhabditis elegans]
          Length = 221

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 7/121 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           Y ++   + D +EP  +T LL+D A+   +  I  RD   +L++G G+G V   + +   
Sbjct: 8   YRLQAIRAHDVYEPAEDTFLLID-AIEKDIKEIRSRDPKLVLEIGCGSGVVSTFVNQALG 66

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIE 176
                V  D++  AL++    A  N +  + D +++D F+ +E L    DV++ NPPY+ 
Sbjct: 67  GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLLGKVDVLLFNPPYVP 124

Query: 177 S 177
           +
Sbjct: 125 T 125


>gi|323339961|ref|ZP_08080228.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
 gi|323092603|gb|EFZ35208.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
          Length = 159

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 5/79 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+     ++  T  PR ETE LV+  L  + P  +       LD+GTG+GA+ L L  E 
Sbjct: 81  FFKRTFFVNESTLIPRVETEDLVEWILHDN-PGAD----AEFLDIGTGSGAIGLTLKAEK 135

Query: 120 PFFKGVGVDISCKALEIAK 138
           P +KG+  D+S +ALE+AK
Sbjct: 136 PLWKGMLSDVSSEALEVAK 154


>gi|302348250|ref|YP_003815888.1| Putative methyltransferase [Acidilobus saccharovorans 345-15]
 gi|302328662|gb|ADL18857.1| Putative methyltransferase [Acidilobus saccharovorans 345-15]
          Length = 207

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)

Query: 55  LGWRDFYN----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           L W D       +R+ LS   +EP  ++ L +D+ +     +   R    +LDLGTG+G 
Sbjct: 4   LRWADITTAAGRLRVALSRCVYEPSDDSLLAIDAMVKL---KEMGRTYEAVLDLGTGSGV 60

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + LA L      + V VDIS  A+E A++    +        +Q D    + G +D+I+ 
Sbjct: 61  LALASLLLFRPRRLVAVDISPYAVECARATLGPDAA-----VIQCDGARCLSGGWDLIIL 115

Query: 171 NPPYIES 177
           NPPY+ S
Sbjct: 116 NPPYLPS 122


>gi|269796895|ref|YP_003316350.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
 gi|269099080|gb|ACZ23516.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
          Length = 394

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E RD V   DLG GTG +   L +  P  + V  D S  A+    + A  NGV +R   L
Sbjct: 247 EARDAV---DLGCGTGVLATVLARSRPGLRVVASDQSAAAVASTLATAGANGVGDRVTGL 303

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           + D  S++ +   D++V NPP+ E   ++ 
Sbjct: 304 RDDALSTLPDASADLVVCNPPFHEGTTLET 333


>gi|88854950|ref|ZP_01129616.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
 gi|88816111|gb|EAR25967.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
          Length = 378

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP + K D  R +DLG+GTG +  +L    P    V +D S  A+   +  A  NGV  R
Sbjct: 228 LPEM-KSDAARAIDLGSGTGVLATSLAVARPKLSVVAIDQSTAAVASTRETADANGVGAR 286

Query: 150 FDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +  + D  +       D+IV NPP+     V   G+ +R
Sbjct: 287 VEAAREDALTERPTASADLIVCNPPFHTGATVHA-GVALR 325


>gi|307324542|ref|ZP_07603749.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
 gi|306889786|gb|EFN20765.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
          Length = 343

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 14/119 (11%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ NA   G+S+R + +++D +    
Sbjct: 170 DIGTGTG-VLAAVLARRGIRRVVATDQDARALGCARENAARLGLSDRIEVVEADLYPP-- 226

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G   ++V NPP++ +     L   V D   R+            R   +G++ HL  DG
Sbjct: 227 GRAPLVVCNPPWVPARPSSPLEYAVYDPSSRM-----------LRGFLNGLAGHLTPDG 274


>gi|297528473|ref|YP_003669748.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|319765256|ref|YP_004130757.1| methyltransferase small [Geobacillus sp. Y412MC52]
 gi|297251725|gb|ADI25171.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|317110122|gb|ADU92614.1| methyltransferase small [Geobacillus sp. Y412MC52]
          Length = 200

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  R T  S  F  R     T LL+++   F  P +       +LD+G G G + LAL K
Sbjct: 26  HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +V+NPP
Sbjct: 79  SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 134


>gi|56418632|ref|YP_145950.1| hypothetical protein GK0097 [Geobacillus kaustophilus HTA426]
 gi|56378474|dbj|BAD74382.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 261

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  R T  S  F  R     T LL+++   F  P +       +LD+G G G + LAL K
Sbjct: 87  HEFRFTTDSGVFSKREVDFGTRLLIET---FEEPGV----AGDLLDVGCGYGPIGLALAK 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +V+NPP
Sbjct: 140 SFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAVVTNPP 195


>gi|319939041|ref|ZP_08013405.1| methyltransferase domain-containing protein [Streptococcus
           anginosus 1_2_62CV]
 gi|319812091|gb|EFW08357.1| methyltransferase domain-containing protein [Streptococcus
           anginosus 1_2_62CV]
          Length = 197

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L+K     +   VDI+ +AL++A+ NA  N V       QS+ + +
Sbjct: 61  VLDVGCGYGTLGLTLVKAKEV-EATLVDINQRALDLARQNAERNQVLATI--FQSNLYQN 117

Query: 161 VEGLFDVIVSNPP 173
           VEG F  I+SNPP
Sbjct: 118 VEGRFHHIISNPP 130


>gi|251793532|ref|YP_003008261.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700]
 gi|262827860|sp|C6AQR4|TRMN6_AGGAN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|247534928|gb|ACS98174.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 234

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           +ILDLG+G+G + L L + S     +  V+I   A + A+ NA+ +   E+    Q D  
Sbjct: 40  QILDLGSGSGLIALMLAQRSSAESRICAVEIDPAAAQQARENALASPWKEKIQVYQQDID 99

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180
            + +     FD+IV+NPPY E+ I 
Sbjct: 100 SFCTQTAQRFDLIVANPPYFEAGIA 124


>gi|153815173|ref|ZP_01967841.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756]
 gi|317502368|ref|ZP_07960534.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089969|ref|ZP_08338860.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847432|gb|EDK24350.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756]
 gi|316896241|gb|EFV18346.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330403107|gb|EGG82670.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 237

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTG G + + L +++      G++I  +  E+A+ +   NG+ ++ D +  D   
Sbjct: 55  RALDLGTGNGIIPILLSEKTQGRHFTGLEIQPEMAEMARRSVDYNGLEDKVDIVTGDIKE 114

Query: 160 SVE----GLFDVIVSNPPYI 175
           + E      FDVI +NPPY+
Sbjct: 115 AAEIFKPAFFDVITTNPPYM 134


>gi|289167734|ref|YP_003446003.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
 gi|288907301|emb|CBJ22137.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
          Length = 196

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L K     +   VDI+ +AL++A+ NA  N V       QS+ +  
Sbjct: 61  VLDVGCGYGPLGLSLAKAYEV-QSTMVDINNRALDLARQNAERNKVEATI--FQSNIYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 118 VKGTFDHVISNPP 130


>gi|290890963|ref|ZP_06554027.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429]
 gi|290479362|gb|EFD88022.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429]
          Length = 204

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLGTG G V ++L    P  K   VD++ ++L +AK+N   N  S   +  QS+ + 
Sbjct: 67  KILDLGTGYGPVGISLKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSA--NVFQSNIYE 124

Query: 160 SVEGLFDVIVSNPP 173
           +V G +  I+ NPP
Sbjct: 125 NVTGSYAAIIVNPP 138


>gi|116491397|ref|YP_810941.1| 16S RNA G1207 methylase RsmC [Oenococcus oeni PSU-1]
 gi|116092122|gb|ABJ57276.1| 16S rRNA m(2)G 1207 methyltransferase [Oenococcus oeni PSU-1]
          Length = 204

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLGTG G V ++L    P  K   VD++ ++L +AK+N   N  S   +  QS+ + 
Sbjct: 67  KILDLGTGYGPVGISLKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSA--NVFQSNIYE 124

Query: 160 SVEGLFDVIVSNPP 173
           +V G +  I+ NPP
Sbjct: 125 NVTGSYAAIIVNPP 138


>gi|114565621|ref|YP_752775.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336556|gb|ABI67404.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 251

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 6/107 (5%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+ R      +D+ L    P ++   + + +DLGTG G + L L   +P  +  G++I  
Sbjct: 26  FQSREGYRFSLDAILLAHFPVLD--GIKQAVDLGTGNGVIALLLAYRAPSLRVTGIEIQE 83

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
             ++ A+ N   N + ER D +Q+D  +  E L     +++VSNPP+
Sbjct: 84  SMIKRARKNIAFNHLEERIDLIQADIKNIKEYLPPQGAELVVSNPPF 130


>gi|324516415|gb|ADY46524.1| HemK methyltransferase family member 2 [Ascaris suum]
          Length = 208

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 61/114 (53%), Gaps = 12/114 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVD 128
           +EP  +T LL+D AL      +  RDV  ++++G G+G V   C  LL+       +  D
Sbjct: 18  YEPAEDTFLLLD-ALEKDAEVLRDRDVSIVVEVGCGSGVVSAFCAQLLQRPACI--LATD 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           ++  AL+  K+ A+ N +    DT+Q D   ++     G+ D+++ NPPY+ +V
Sbjct: 75  VNFMALKCTKNTAILNAID--LDTVQCDLIVALSDRLRGIVDLLLFNPPYVPTV 126


>gi|255659095|ref|ZP_05404504.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida
           DSM 20544]
 gi|260848539|gb|EEX68546.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida
           DSM 20544]
          Length = 252

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR   R   R+L+LGTGTG + L +  E    +   V+IS    E+A  N 
Sbjct: 33  LDAVLLAHFPRYRSRQ--RVLELGTGTGVIPLLIADEVAHVE--AVEISPVMAELAARNV 88

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174
             N + E+    + D+  ++  L     FDV+++NPPY
Sbjct: 89  HMNELEEKIAVKEGDY-RAIRSLYPAESFDVVLANPPY 125


>gi|227503476|ref|ZP_03933525.1| methyltransferase small [Corynebacterium accolens ATCC 49725]
 gi|227075979|gb|EEI13942.1| methyltransferase small [Corynebacterium accolens ATCC 49725]
          Length = 525

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  +LDLGTG+G   L  L+ +        D+  +AL++A +    +G S   + ++  W
Sbjct: 163 VSTVLDLGTGSGVQLLGQLECARSI--TATDVHRRALDLAGATVAASGTSTEVELVEGSW 220

Query: 158 FSSVEG-LFDVIVSNPPYI 175
           F  V G  FD IV+NPP++
Sbjct: 221 FEPVAGRTFDRIVANPPFV 239


>gi|323527499|ref|YP_004229652.1| methyltransferase small [Burkholderia sp. CCGE1001]
 gi|323384501|gb|ADX56592.1| methyltransferase small [Burkholderia sp. CCGE1001]
          Length = 375

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  D+GTGTG V  ALL +    K V  D   +AL  A+ N    G  ++ + +Q+D F 
Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIVATDQDPRALACARENLTRLGYEQQVEVVQADLFP 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             EG   ++V NPP++ +     +   V D + R+ L G + GL+ +
Sbjct: 257 --EGRAPLVVCNPPWVPARPASPIEYAVYDPESRMLL-GFLKGLAEH 300


>gi|317151857|ref|YP_004119905.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
 gi|316942108|gb|ADU61159.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
          Length = 268

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WF 158
           +DLG G G V LALL   P  +  GVDI  +++ +A  NAV    ++R+    +D   W 
Sbjct: 54  IDLGCGCGVVGLALLLRQPDLRLTGVDIDPESVRVAGLNAVNLHYADRYAATLADVAQWR 113

Query: 159 SSVEGLFDVIVSNPPY 174
           S  E + D +V+NPPY
Sbjct: 114 S--ERVVDFVVANPPY 127


>gi|150005674|ref|YP_001300418.1| hypothetical protein BVU_3164 [Bacteroides vulgatus ATCC 8482]
 gi|254884107|ref|ZP_05256817.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776584|ref|ZP_06742054.1| methyltransferase small domain protein [Bacteroides vulgatus PC510]
 gi|319640872|ref|ZP_07995583.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A]
 gi|262827953|sp|A6L532|TRMN6_BACV8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|149934098|gb|ABR40796.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836900|gb|EET17209.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449572|gb|EFG18102.1| methyltransferase small domain protein [Bacteroides vulgatus PC510]
 gi|317387509|gb|EFV68377.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A]
          Length = 234

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ILD+GTGTG + L ++ +    +   VDI   A+E A+ N   +   +R +  LQ     
Sbjct: 41  ILDIGTGTGLISL-MMAQRCNARIRAVDIDADAVEQARGNVAASPWQDRIEVELQDICHF 99

Query: 160 SVEGLFDVIVSNPPY 174
           + E LFDVIVSNPPY
Sbjct: 100 TSETLFDVIVSNPPY 114


>gi|317126847|ref|YP_004093129.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
 gi|315471795|gb|ADU28398.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
          Length = 200

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++S   F LP +    V  I+D+G G G + ++L K +P    + +DI+ +A+++ 
Sbjct: 46  SRLLIES---FELPNV----VGTIVDVGCGWGPISISLAKRNPNIDFIALDINERAVKLT 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           + N   NGV+     +QS+     EG  +  I++NPP
Sbjct: 99  EENVKLNGVT-NLHVMQSNLLEGHEGKYYSAIITNPP 134


>gi|269137833|ref|YP_003294533.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|267983493|gb|ACY83322.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|304557888|gb|ADM40552.1| Ribosomal RNA small subunit methyltransferase C [Edwardsiella tarda
           FL6-60]
          Length = 378

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           SLP   K +V   LD+G G G +  A+ + SP  +    D++  AL  ++     N +  
Sbjct: 223 SLPHGLKGNV---LDVGCGAGVLSAAIARMSPETRLTLSDVNAAALTASRQTLAQNAIDG 279

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
             + L S+ FS + G FD+I+SNPP+ + V    L  + 
Sbjct: 280 --EVLASNVFSDISGRFDLIISNPPFHDGVQTSLLAAQT 316


>gi|329954889|ref|ZP_08295906.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
 gi|328526993|gb|EGF54004.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
          Length = 236

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  RILD+G G+G + L L + +P      V+I   A   A+ N  ++  S R + +  
Sbjct: 36  QDAKRILDVGAGSGLISLQLAQRNPEAAITSVEIDPAAAAQAQENIQSSPWSHRMEVVCC 95

Query: 156 DWFS-SVEGLFDVIVSNPPYI 175
           D+     E  FD+IVSNPPY 
Sbjct: 96  DFRKYHPEDRFDLIVSNPPYF 116


>gi|183603460|ref|ZP_02964394.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577112|gb|EDT97640.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC3059-06]
          Length = 193

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 58  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYAR 114

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 115 VQGRFDHVISNPP 127


>gi|166033096|ref|ZP_02235925.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC
           27755]
 gi|166027453|gb|EDR46210.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC
           27755]
          Length = 246

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  ++++ +  + LDLGTGTG + + L  ++P     G+++  ++ ++A+ + 
Sbjct: 32  MDAVLLSSYAKVKRGE--QALDLGTGTGILPILLEAKNPGLHYTGLEVQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             NG+  + D +  D   +        ++VIVSNPPY+
Sbjct: 90  AHNGLENKIDIVTGDIKEASHIFGNDSYEVIVSNPPYM 127


>gi|328858365|gb|EGG07478.1| hypothetical protein MELLADRAFT_77592 [Melampsora larici-populina
           98AG31]
          Length = 948

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLV-----------DSALAFSLPRIEKRDVVRILDLGTGT 108
           F N+++ +      PRPETE              D   + + P+  K D+ ++LD+GTG+
Sbjct: 612 FGNIQIAVQPPILIPRPETEQWTCKLSDMIKTWNDPEKSGTKPQFGKHDL-KVLDIGTGS 670

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           G +   L    P    +GVD+  +A+E+AK NA + G++
Sbjct: 671 GCIPTYLAYNHPNIFVMGVDVDHQAIEVAKRNAFSYGLT 709


>gi|323699539|ref|ZP_08111451.1| methyltransferase small [Desulfovibrio sp. ND132]
 gi|323459471|gb|EGB15336.1| methyltransferase small [Desulfovibrio desulfuricans ND132]
          Length = 253

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWF 158
           LDLG G G V L LL   P  +  GV+++  ++  A+ NA +   S++   +Q   +DW 
Sbjct: 49  LDLGCGCGVVALGLLLRQPGLRLAGVELNPLSVRAAEENAASLHFSDKLSIIQGDVADW- 107

Query: 159 SSVEGLFDVIVSNPPY 174
              +G+ D +V+NPPY
Sbjct: 108 -QPDGVVDFVVANPPY 122


>gi|172079624|ref|ZP_02709675.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1873-00]
 gi|172042082|gb|EDT50128.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1873-00]
 gi|332203991|gb|EGJ18058.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47368]
          Length = 193

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 58  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 115 VQGRFDHVISNPP 127


>gi|149007219|ref|ZP_01830883.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761257|gb|EDK68224.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
           SP18-BS74]
          Length = 196

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 61  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLARRNAEKN--NAKATIFQSNIYAR 117

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 118 VQGRFDHVISNPP 130


>gi|41406471|ref|NP_959307.1| hypothetical protein MAP0373 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394820|gb|AAS02690.1| hypothetical protein MAP_0373 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 229

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 19/178 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + ++P+ ++ LLVD      L  I  R   R+LDL TG+G V +A   E         
Sbjct: 13  AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 66

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183
           D    A+  A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +    ++D L
Sbjct: 67  DKCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 124

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVR 237
           G       P  + + G DG      + +   + L   G    + S   G  Q +D ++
Sbjct: 125 GPVT---GPSWAWNAGRDGRLVLDPLCESAPKLLRDGGSLLLVHSALAGVQQSLDCLK 179


>gi|222099697|ref|YP_002534265.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
           4359]
 gi|221572087|gb|ACM22899.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
           4359]
          Length = 211

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDW 157
           ++LDLG G G + + L KE P  +    DI+ +A+E AK NA  +   V  R+  L   W
Sbjct: 64  KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVEVRWGNLYEPW 123

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               EG+ FD+IV NPP +    V    +E+    P    DGG
Sbjct: 124 ----EGMKFDMIVCNPPIVAGKEV---WMEIVRRAPEFLEDGG 159


>gi|326385164|ref|ZP_08206832.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196129|gb|EGD53335.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
          Length = 234

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 18/154 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T +L+DS LA  L     R   R+LDL TG+GAV LA  +         VD   
Sbjct: 21  YRPQTDTRMLIDSLLALDL---SGR---RMLDLCTGSGAVALAGARAGADIT--AVDSCP 72

Query: 132 KALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            A+   +  AV  G    FD   + SD     +  FD++  NPPY+ + I    G E   
Sbjct: 73  HAVASVRRAAVDAG----FDVHAVLSDLADVTDSGFDIVTCNPPYVLTPI----GTESSI 124

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             PR + + G DG +    +   +   L  DG+ 
Sbjct: 125 DGPRHAWNAGPDGRAVLDPLCSALPGLLAADGIA 158


>gi|322385392|ref|ZP_08059037.1| methyltransferase domain protein [Streptococcus cristatus ATCC
           51100]
 gi|321270651|gb|EFX53566.1| methyltransferase domain protein [Streptococcus cristatus ATCC
           51100]
          Length = 195

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K       + VDI+ +AL++A+ NA  N VS   D  QS+ +  
Sbjct: 61  LLDVGCGYGTLGLTLAKAQELEVTL-VDINQRALDLARKNADANQVSA--DIFQSNVYEQ 117

Query: 161 VEGLFDVIVSNPP 173
           V G F  I+SNPP
Sbjct: 118 VAGQFHHIISNPP 130


>gi|256826282|ref|YP_003150242.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
 gi|256689675|gb|ACV07477.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
          Length = 522

 Score = 50.1 bits (118), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 23/167 (13%)

Query: 74  PRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           P PE  +L        LA   PR E   V R LD+GTG G   L L   +   + V  DI
Sbjct: 155 PLPEDHVLGIGGASVTLAAWTPRPE---VARALDIGTGCGVQALHLTHHA--QRVVATDI 209

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188
           S +ALE A+     NGV    D         V G  FD+IVSNPP++  +     G+ V 
Sbjct: 210 SERALEFARFTCALNGVE--LDLRHGSLTEPVAGEEFDLIVSNPPFV--ITPRTKGVPVY 265

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQ 231
           ++      DGG++       +   V+  L   G+  +    EIG ++
Sbjct: 266 EY-----RDGGVEADGITSGLIGQVAARLAPGGMAQMLGNWEIGPDE 307


>gi|50119680|ref|YP_048847.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
 gi|81646158|sp|Q6D984|RSMC_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|49610206|emb|CAG73649.1| ribosomal RNA small subunit methyltransferase C [Pectobacterium
           atrosepticum SCRI1043]
          Length = 348

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L K+SP  +    D+S  A+E   SNA     +     + S+ +S
Sbjct: 199 KVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVE--SSNATLAANALEGSVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            ++G FD+IVSNPP+ + +      +E+
Sbjct: 257 DIDGRFDMIVSNPPFHDGLQTSLQAVEM 284


>gi|254363054|ref|ZP_04979113.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
           PHL213]
 gi|153094719|gb|EDN75509.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
           PHL213]
          Length = 329

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 4/120 (3%)

Query: 82  VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +D+     L   +K D ++  +LDLG G G +   L ++ P  K    DI   ALE  + 
Sbjct: 172 LDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTMSDIHAMALESGRR 231

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               N +    + + SD FS +   FD+IVSNPP+ + V      +E   F  +  L  G
Sbjct: 232 TLAENQLEG--EVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVEELIFQAKNHLTKG 289


>gi|152982224|ref|YP_001353635.1| hypothetical protein mma_1945 [Janthinobacterium sp. Marseille]
 gi|151282301|gb|ABR90711.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 368

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +  ALL +    K V  +   +AL  AK N +   + +R   L++D F +  
Sbjct: 195 DIGTGTGVIA-ALLAQRGVEKVVATEQDVRALACAKENLLRLDLRDRVQVLEADLFPA-- 251

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP+I +     +   + D D R+ L G ++GL+ +
Sbjct: 252 GKAPLIVCNPPWIPARPSSAIEYAIYDPDSRM-LRGFLNGLAAH 294


>gi|15900728|ref|NP_345332.1| hypothetical protein SP_0841 [Streptococcus pneumoniae TIGR4]
 gi|148990349|ref|ZP_01821535.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|148997084|ref|ZP_01824738.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae
           SP11-BS70]
 gi|194398552|ref|YP_002037476.1| methyltransferase small domain [Streptococcus pneumoniae G54]
 gi|298503153|ref|YP_003725093.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|307067437|ref|YP_003876403.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200]
 gi|14972315|gb|AAK74972.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
 gi|147756784|gb|EDK63824.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147924378|gb|EDK75469.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|194358219|gb|ACF56667.1| Methyltransferase small domain [Streptococcus pneumoniae G54]
 gi|298238748|gb|ADI69879.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|306408974|gb|ADM84401.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200]
          Length = 196

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 61  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 117

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 118 VQGRFDHVISNPP 130


>gi|301097822|ref|XP_002898005.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262106450|gb|EEY64502.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 200

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 10/123 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKE 118
           + +    D +EP  +T L VD AL   LP++   +    +++G G+GAV       L K 
Sbjct: 7   IDMAYDCDVYEPAEDTYLFVD-ALQDELPQLVALNPAICVEIGCGSGAVFVYLATQLQKM 65

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
                 +  DI+  A  +A+  A  NG +E FD +++D    +   ++G  DV++ NPPY
Sbjct: 66  GTRAMFLATDINPLAAGVAQQTAKNNG-AEAFDVVRTDLLQCYEPRIQGHVDVLLFNPPY 124

Query: 175 IES 177
           + +
Sbjct: 125 VPT 127


>gi|169832916|ref|YP_001694296.1| methyltransferase small subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168995418|gb|ACA36030.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Hungary19A-6]
 gi|327390192|gb|EGE88535.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA04375]
          Length = 193

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 58  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 115 VQGRFDHVISNPP 127


>gi|315604644|ref|ZP_07879707.1| HemK family modification methylase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313656|gb|EFU61710.1| HemK family modification methylase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 303

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 60  FYNVRLTLSS--DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            Y   LTL S    F  RPETE+L   A+  +   +  R   R++DL TG+GA+  ++  
Sbjct: 82  MYFRSLTLQSIPGVFVVRPETEVLAGLAIDEAAAVVRARGEARVVDLCTGSGAIAFSVAT 141

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPP 173
           E+   +   V+       +A  N    G      ER D       + ++ + DV+V+NPP
Sbjct: 142 EAEHTEVWAVEKEPDPFALACRNRDLLGARGVHLERGDATDPATLAHLDAMVDVVVTNPP 201

Query: 174 YIES 177
           Y+ +
Sbjct: 202 YVPA 205


>gi|325204216|gb|ADY99669.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240355]
          Length = 331

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|325130320|gb|EGC53087.1| methyltransferase domain protein [Neisseria meningitidis
           OX99.30304]
          Length = 331

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|111657488|ref|ZP_01408234.1| hypothetical protein SpneT_02001313 [Streptococcus pneumoniae
           TIGR4]
 gi|183603472|ref|ZP_02715072.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC0288-04]
 gi|183603794|ref|ZP_02721432.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae MLV-016]
 gi|221231625|ref|YP_002510777.1| methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854347|ref|YP_002735859.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae JJA]
 gi|225861263|ref|YP_002742772.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298230687|ref|ZP_06964368.1| methyltransferase small domain [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298254394|ref|ZP_06977980.1| methyltransferase small domain [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|183574719|gb|EDT95247.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC0288-04]
 gi|183578489|gb|EDT99017.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae MLV-016]
 gi|220674085|emb|CAR68602.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225722342|gb|ACO18195.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae JJA]
 gi|225727139|gb|ACO22990.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|332204845|gb|EGJ18910.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47901]
          Length = 193

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L+K     +   VDI+ +AL++A+ NA  N  + +    QS+ ++ 
Sbjct: 58  VLDVGCGYGPLGLSLVKVYGV-QATMVDINTRALDLAQRNAEKN--NAKATIFQSNIYAR 114

Query: 161 VEGLFDVIVSNPP 173
           V+G FD ++SNPP
Sbjct: 115 VQGRFDHVISNPP 127


>gi|226309797|ref|YP_002769691.1| hypothetical protein BBR47_02100 [Brevibacillus brevis NBRC 100599]
 gi|226092745|dbj|BAH41187.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 198

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 13/115 (11%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVV-----------RILDLGTGTGAVCLALLKES 119
           TF+ R      +  A  FS  RI+   V+           R+LD+G G G + L   K +
Sbjct: 20  TFKLRDNEFRFITDAGVFSRDRIDFGSVLLIENMEINSHARVLDVGCGYGPMGLTAAKLA 79

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
              +   +D++ +A+ +A+ NA  NG+ +  +   SD +S V+G  FDVI++NPP
Sbjct: 80  DHGRVTMIDVNERAVNLARRNAEANGI-KNVEVRVSDVYSGVQGEQFDVILTNPP 133


>gi|118463025|ref|YP_879711.1| methylase, putative [Mycobacterium avium 104]
 gi|118164312|gb|ABK65209.1| methylase, putative [Mycobacterium avium 104]
          Length = 229

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + ++P+ ++ LLVD      L  I  R   R+LDL TG+G V +A   E         
Sbjct: 13  AHNVYQPQEDSRLLVDVMHGTGL--IPGR---RVLDLCTGSGFVAIAA-AEMGCASVTAF 66

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES---VIVDCL 183
           D    A+  A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +    ++D L
Sbjct: 67  DKCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDEL 124

Query: 184 GLEVRDFDPRISLDGGIDG 202
           G       P  + + G DG
Sbjct: 125 GPVT---GPSWAWNAGRDG 140


>gi|294101614|ref|YP_003553472.1| methyltransferase small [Aminobacterium colombiense DSM 12261]
 gi|293616594|gb|ADE56748.1| methyltransferase small [Aminobacterium colombiense DSM 12261]
          Length = 246

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 11/113 (9%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDI 129
            ++P     + VD+ L  S  +   +D  RIL+LG  TG + L L    P    + G+DI
Sbjct: 18  AWQPVDGPRVTVDTILLASFVKARGKD--RILELGCATGVISLLLALRLPEATKIEGIDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPYIE 176
               + +AK NA  NG+  R     SD       ++S    FDV+V+NPPY E
Sbjct: 76  QEDLVNLAKRNAQENGLDARVSFFLSDLRNIKDRYASQS--FDVVVTNPPYDE 126


>gi|138893776|ref|YP_001124229.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196251113|ref|ZP_03149792.1| methyltransferase small [Geobacillus sp. G11MC16]
 gi|134265289|gb|ABO65484.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196209354|gb|EDY04134.1| methyltransferase small [Geobacillus sp. G11MC16]
          Length = 200

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           +  R T  S  F  R      VD      +   ++ DV   +LD+G G G + LAL K  
Sbjct: 26  HEFRFTTDSGVFSKRE-----VDFGTRLLIETFQEPDVAGDLLDVGCGYGPIGLALAKSF 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +++NPP
Sbjct: 81  PDRRVQMIDVNERALELAEENKQANGIHNAI-IYKSDLFSEVGEQRFAAVITNPP 134


>gi|261492828|ref|ZP_05989375.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494807|ref|ZP_05991285.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309518|gb|EEY10743.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311510|gb|EEY12666.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 329

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +   L ++ P  K    DI   ALE  +     N +    + + SD FS
Sbjct: 192 KVLDLGCGAGVIGATLKQQFPKIKLTMSDIHAMALESGRRTLAENQLEG--EVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +   FD+IVSNPP+ + V      +E   F  +  L  G
Sbjct: 250 HINERFDLIVSNPPFHDGVDTAYRAVEELIFQAKNHLTKG 289


>gi|238918501|ref|YP_002932015.1| 16S ribosomal RNA m2G1207 methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|238868069|gb|ACR67780.1| ribosomal RNA small subunit methyltransferase C (2) [Edwardsiella
           ictaluri 93-146]
          Length = 346

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G +  A+ + SP       D++  AL  ++     N +    + L S+ FS
Sbjct: 199 RVLDVGCGAGVLSAAITRMSPETTLTLSDVNAAALTASRQTLAQNEIDG--EILASNVFS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            + G FD+I+SNPP+ + V    L  + 
Sbjct: 257 DISGRFDLIISNPPFHDGVQTSLLAAQT 284


>gi|312796796|ref|YP_004029718.1| hypothetical protein RBRH_01509 [Burkholderia rhizoxinica HKI 454]
 gi|312168571|emb|CBW75574.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 326

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 20/155 (12%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           +PE    +D   A  L +        +LD+G G+G + +  L        VG+D++ +A 
Sbjct: 78  QPEQLFFMDYTSAEDLKQ------ASVLDIGVGSGVLSIFCLLNGAT-SCVGLDVNPRAK 130

Query: 135 EIAKSNAVTNGVSERFDT---LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +A  NA+ N + + FD      SD F+SV +  FD I SNPP+  +             
Sbjct: 131 ILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEPT---------PPGI 181

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D  ++   GI G+     I   ++ HL  DG+  V
Sbjct: 182 DYYVNSAAGIYGMDFAEKILSNINPHLTDDGMLQV 216


>gi|319902147|ref|YP_004161875.1| methyltransferase small [Bacteroides helcogenes P 36-108]
 gi|319417178|gb|ADV44289.1| methyltransferase small [Bacteroides helcogenes P 36-108]
          Length = 235

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG + L L + +   K   ++I   A + A+ N + +  ++R + +  D+ +
Sbjct: 40  RVLDVGTGTGLIALQLAQRNSDAKITAIEIDIAAAKQARDNVLHSSWADRIEVVCIDFRN 99

Query: 160 -SVEGLFDVIVSNPPY 174
              E  FD+IVSNPPY
Sbjct: 100 YQSEDKFDLIVSNPPY 115


>gi|237738115|ref|ZP_04568596.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419995|gb|EEO35042.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 245

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I  R    I+DLGTG G + L L K++   K  G++I   +  +AK N 
Sbjct: 31  IDSLLVSEFATIT-RTTKNIIDLGTGNGVIPLFLSKKTK-AKITGIEIQSISSALAKRNI 88

Query: 142 VTNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPY 174
             N + E+ + +  D   W     +G FD++V+NPP+
Sbjct: 89  ELNNLQEQIEIINDDMKNWNKYFRKGYFDLVVTNPPF 125


>gi|220928239|ref|YP_002505148.1| methyltransferase small [Clostridium cellulolyticum H10]
 gi|219998567|gb|ACL75168.1| methyltransferase small [Clostridium cellulolyticum H10]
          Length = 198

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+G G GA+ L +    P      +D++ +AL+  K NA +N +S   + L S+ F
Sbjct: 59  MSVLDIGCGYGAIGLYIKSIFPQQNITMIDVNNRALDYTKKNAASNNLS--VEALNSNLF 116

Query: 159 SSVEG-LFDVIVSNPP 173
           +++EG  FD I+SNPP
Sbjct: 117 TALEGRTFDDIISNPP 132


>gi|308187814|ref|YP_003931945.1| hypothetical protein Pvag_2323 [Pantoea vagans C9-1]
 gi|308058324|gb|ADO10496.1| Uncharacterized protein [Pantoea vagans C9-1]
          Length = 248

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+G+G+G + L L + +P    +  V++  +A + A+ N   +   ER    Q D
Sbjct: 48  VRRILDIGSGSGLIALMLAQRTPSQVQIDAVELEPEAAQQAQENMQQSPWPERIQVHQQD 107

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W    +  + +IVSNPPY
Sbjct: 108 IASWAEQCDKRYSLIVSNPPY 128


>gi|294634635|ref|ZP_06713169.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
           ATCC 23685]
 gi|291091965|gb|EFE24526.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
           ATCC 23685]
          Length = 373

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G +  A+ + SP       D++  AL  ++     N +    + + S+ FS
Sbjct: 225 RVLDVGCGAGVLSAAIARMSPETTLTLCDVNAAALAASRQTLAQNDIPG--EVIASNVFS 282

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            ++G FD+I+SNPP+ + V    L  + 
Sbjct: 283 DIDGRFDLIISNPPFHDGVQTSLLAAQT 310


>gi|323443087|gb|EGB00707.1| methyltransferase small subunit [Staphylococcus aureus O46]
          Length = 202

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 22/156 (14%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSD-------- 46

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +LV + L    P   KR    I D+G G G + L + K SP      +D++ +AL + K
Sbjct: 47  -VLVQTFLKTHPPGPSKR----IADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
            N   NG+ +     +SD  S+ E   FD I++NPP
Sbjct: 102 KNQKLNGI-DNVIVKESDALSAEEDKSFDFILTNPP 136


>gi|294673578|ref|YP_003574194.1| hypothetical protein PRU_0841 [Prevotella ruminicola 23]
 gi|294471995|gb|ADE81384.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 236

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG V L + +  P  +  G+DI   A + A+ N V +  S+R    + D   
Sbjct: 41  RILDIGTGTGLVALMMAQRFPEAQVTGIDIDEDAAQQAQENVVGSPFSDRIMINREDATK 100

Query: 160 -SVEGLFDVIVSNPPY 174
              +  +D IV NPPY
Sbjct: 101 IDDKAGYDAIVCNPPY 116


>gi|293607190|ref|ZP_06689531.1| methyltransferase [Achromobacter piechaudii ATCC 43553]
 gi|292814282|gb|EFF73422.1| methyltransferase [Achromobacter piechaudii ATCC 43553]
          Length = 407

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A++      + +  D+  +AL  A+ N    G+S++ D +++D F   E
Sbjct: 233 DIGTGTG-VLAAVIARRGGKRVIATDLDPRALACARENLEQLGLSKQVDVVEADLFP--E 289

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           G   ++V NPP++ +     L   V D D R+ L G ++GL  + T
Sbjct: 290 GRVSLVVCNPPWLPARPSSPLEQAVYDPDSRM-LRGFLNGLPAHLT 334


>gi|238790071|ref|ZP_04633849.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           frederiksenii ATCC 33641]
 gi|238721884|gb|EEQ13546.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           frederiksenii ATCC 33641]
          Length = 347

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L ++ P  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 VLDVGCGAGVLASVLAQQLPKIKWTLSDVSAAAIESSRATLAANNIEAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEM 284


>gi|304387506|ref|ZP_07369695.1| methyltransferase domain protein [Neisseria meningitidis ATCC
           13091]
 gi|304338393|gb|EFM04514.1| methyltransferase domain protein [Neisseria meningitidis ATCC
           13091]
          Length = 367

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|294787522|ref|ZP_06752775.1| putative methyltransferase small domain protein [Parascardovia
           denticolens F0305]
 gi|315226897|ref|ZP_07868685.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105]
 gi|294484878|gb|EFG32513.1| putative methyltransferase small domain protein [Parascardovia
           denticolens F0305]
 gi|315121029|gb|EFT84161.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105]
          Length = 250

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +L+      +    E   V   LDLG G G + LAL +E P      +D++ +A+E+ 
Sbjct: 46  TRVLLKEVPGRAADEAEGHRVKNCLDLGCGWGPISLALAREYPQATVWALDVNERAVELT 105

Query: 138 KSNAVTNGVSE----RFDTLQSDWFSSV-EGLFDVIVSNPP 173
           K+NA  N V+       ++L +D+  +  E  FD+I SNPP
Sbjct: 106 KANARRNHVASVQAGTAESLAADYGQAWEEARFDLIWSNPP 146


>gi|162446999|ref|YP_001620131.1| methyltransferase [Acholeplasma laidlawii PG-8A]
 gi|161985106|gb|ABX80755.1| methyltransferase [Acholeplasma laidlawii PG-8A]
          Length = 239

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 15/111 (13%)

Query: 78  TELLVDSAL--AFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKG--VG 126
           T+L ++S +  AF++  I   D VR       ILD GTG GA+ L L   S  F G   G
Sbjct: 9   TKLYIESDIGKAFNMDTIILSDFVRVPKDTKSILDFGTGNGAIMLYL---SQRFSGHITG 65

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176
           +++  K  E+A  N   N +  R D +  D  +   +   D+IVSNPP+ +
Sbjct: 66  IELQEKRYELAVHNIKLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPFFK 116


>gi|312173676|emb|CBX81930.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           ATCC BAA-2158]
          Length = 366

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 223 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 280

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 281 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 319

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 320 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 356


>gi|308389325|gb|ADO31645.1| hypothetical protein NMBB_1318 [Neisseria meningitidis alpha710]
          Length = 367

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|148270257|ref|YP_001244717.1| methyltransferase small [Thermotoga petrophila RKU-1]
 gi|147735801|gb|ABQ47141.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga petrophila RKU-1]
          Length = 210

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           ++LDLG G G V + L KE P  +    DI+ +A+E AK NA  + V    R+  L   W
Sbjct: 63  KVLDLGCGYGVVGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVDIRWGNLYEPW 122

Query: 158 FSSVEGL-FDVIVSNPPYI 175
               EG+ FD+IV NPP +
Sbjct: 123 ----EGMKFDMIVCNPPVV 137


>gi|325136282|gb|EGC58890.1| methyltransferase domain protein [Neisseria meningitidis M0579]
          Length = 367

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|292489500|ref|YP_003532388.1| ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           CFBP1430]
 gi|291554935|emb|CBA22900.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           CFBP1430]
          Length = 366

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 223 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 280

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 281 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 319

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 320 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 356


>gi|229916344|ref|YP_002884990.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b]
 gi|259534532|sp|C4L423|PRMA_EXISA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|229467773|gb|ACQ69545.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b]
          Length = 312

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 23/136 (16%)

Query: 57  WRDFY-----NVRLTLSS--DTFEPRPETE-LLVDSALAFS----------LPRIEK--R 96
           W+ +Y     + +LT+    + + P+PE   +L+D  +AF           +  IE   R
Sbjct: 115 WKQYYKPVKISQQLTIVPLWEEYTPQPEENVILLDPGMAFGTGTHPTTMLCIQAIENYIR 174

Query: 97  DVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++D+GTG+G + +A  K  +   K +  D+   A+E A+ N  TNGV E       
Sbjct: 175 EGDHVIDVGTGSGVLSIAAAKLGAASVKAL--DLDSVAVESARQNVETNGVGELVQVDTG 232

Query: 156 DWFSSVEGLFDVIVSN 171
           D    VEG +D++V+N
Sbjct: 233 DLLKGVEGEYDLVVAN 248


>gi|172035682|ref|YP_001802183.1| putative methyltransferase [Cyanothece sp. ATCC 51142]
 gi|171697136|gb|ACB50117.1| putative methyltransferase [Cyanothece sp. ATCC 51142]
          Length = 247

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +L++D+ +A         D  RILDLG GTG + L LLK  P  K + VD S + LE
Sbjct: 34  PHYDLMLDTLVA-----CVSIDAHRILDLGCGTGELSLKLLKHCPNAKVMAVDYSPRMLE 88

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +AKS        ER   +Q D+ +   G
Sbjct: 89  MAKSKLEKTEFLERIRFIQGDFGAWANG 116


>gi|261340876|ref|ZP_05968734.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC
           35316]
 gi|288317307|gb|EFC56245.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC
           35316]
          Length = 245

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  RILD+GTG+G + L L + +     +  V++  +A   A  NA  +  +ER +   +
Sbjct: 44  EATRILDIGTGSGLLALMLAQRTKNHVTIDAVELDAQAAGQASENAAESPWAERINVKCA 103

Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIVDC 182
           D   W       +D+IVSNPPY E   V+C
Sbjct: 104 DVLAWAPEQTARYDLIVSNPPYFEPG-VEC 132


>gi|228477542|ref|ZP_04062175.1| methyltransferase small domain protein [Streptococcus salivarius
           SK126]
 gi|228250686|gb|EEK09884.1| methyltransferase small domain protein [Streptococcus salivarius
           SK126]
          Length = 196

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L K     K   +DI+ +A+++A+ NA  N V       QS+ + +
Sbjct: 61  LLDVGCGYGPLGISLAKVQGV-KATMIDINSRAIDLARQNAQRNKVEATI--FQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VTGSFDYIISNPP 130


>gi|541428|pir||S41759 ribosomal protein L11 methyltransferase (EC 2.1.1.-) - Clostridium
           acetobutylicum
          Length = 300

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 30/194 (15%)

Query: 57  WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95
           W+ +Y       R+ +    + + P+  E  L +D  +AF             +L R   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V+   + L  
Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D+IV+N      +I D + + + D +  +  DG        +  A+ V  
Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286

Query: 216 HLNKDGLCSVEIGY 229
           +L K+    +E+GY
Sbjct: 287 NLKKNKFEIIEVGY 300


>gi|299140951|ref|ZP_07034089.1| SmtA protein [Prevotella oris C735]
 gi|298577917|gb|EFI49785.1| SmtA protein [Prevotella oris C735]
          Length = 231

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LD+GTGTG + L L +  P  K   +DI+ +A   AK N   +  + +    Q     
Sbjct: 38  RVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQISLQE 97

Query: 158 FSSVEGLFDVIVSNPPY 174
           F S E  FD IVSNPP+
Sbjct: 98  FESAE-RFDCIVSNPPF 113


>gi|242129429|gb|ACS83764.1| N-methyl transferase [Nonomuraea sp. WU8817]
          Length = 372

 Score = 49.7 bits (117), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 18/128 (14%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL  G G   L     S   +   V+I+  A  + ++N   NG+ +R +    D + +V
Sbjct: 149 LDLCAGPGVQALTASLRSD--RVTAVEINPVAAALCRTNIAMNGLGDRMEVRLGDLYGAV 206

Query: 162 EG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            G +FD IVSNPP +   E V    +G            DGG DG     TI DG+  HL
Sbjct: 207 PGEVFDDIVSNPPLLPVPEDVQFAFVG------------DGGRDGFDISWTILDGLPEHL 254

Query: 218 NKDGLCSV 225
           +  G C +
Sbjct: 255 SDRGACRI 262


>gi|292898288|ref|YP_003537657.1| ribosomal RNA small subunit methyltransferase C [Erwinia amylovora
           ATCC 49946]
 gi|291198136|emb|CBJ45241.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) [Erwinia amylovora
           ATCC 49946]
          Length = 342

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP  +    D++  A+  +K+    N +    D   S+ +S
Sbjct: 199 KVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLAANQLEG--DVFASNVWS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            + G FD+I+SNPP+ + V              + SLD         +T+  G   HLN 
Sbjct: 257 DISGRFDMIMSNPPFHDGV--------------QTSLDAA-------QTLIRGAVSHLNT 295

Query: 220 DG----LCSVEIGYNQKVDVVRIFESRKLFLVNA-FKDY 253
            G    + +  + Y Q +D    F S ++ L N  FK Y
Sbjct: 296 GGELRIVANAFLPYPQVLD--EAFGSHEVLLQNGRFKVY 332


>gi|257469306|ref|ZP_05633400.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063553|ref|ZP_07928038.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689229|gb|EFS26064.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
          Length = 225

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+GTG G + + L  +       G+DI  + +E+A+ N   N + E    +  D   
Sbjct: 43  KILDIGTGNGVIPILLSSKEKGEDITGIDIQEENIELAEKNIELNCLKENIKIVHGDVKE 102

Query: 160 -SVEGLFDVIVSNPPYIE 176
            S+   FD IVSNPPY+E
Sbjct: 103 YSMGNSFDYIVSNPPYME 120


>gi|331092559|ref|ZP_08341380.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400671|gb|EGG80277.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 246

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 14/114 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R++K +  ++LD+GTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLSNFARVKKGE--KVLDIGTGTGIIPILLEAKTEGEHFTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             N + ++ D +  D       F SV   FDV+ +NPPY    ++   GL+ +D
Sbjct: 90  AYNHLEDKIDIVTGDVKEAVNLFGSV--FFDVVTTNPPY----MIGAHGLQNKD 137


>gi|313897519|ref|ZP_07831062.1| methyltransferase small domain protein [Clostridium sp. HGF2]
 gi|312957889|gb|EFR39514.1| methyltransferase small domain protein [Clostridium sp. HGF2]
          Length = 220

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+AL     +++K +  R+LD+GT  GA+ LA  + +P +   G+DI  +A+ +A+ N  
Sbjct: 28  DTALLAQFMKVKKGE--RVLDIGTNNGALLLAAHRYAPSYL-YGIDIQPEAIAVAEKNME 84

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + ++      Q    +++E + DVIV NPPY +
Sbjct: 85  HHHITNVVLMAQDICDAALEKV-DVIVCNPPYFK 117


>gi|152978607|ref|YP_001344236.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           succinogenes 130Z]
 gi|226712985|sp|A6VMV4|RSMC_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150840330|gb|ABR74301.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus succinogenes
           130Z]
          Length = 333

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 2/78 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G +   + +++P  + +  DI   AL  A+     N ++ +   L SD FS 
Sbjct: 197 VLDLGCGAGVLGAYVKQQNPQARVMLTDIHAMALASAERTLAENRLAGK--VLASDVFSH 254

Query: 161 VEGLFDVIVSNPPYIESV 178
           ++G FD+I+SNPP+ + +
Sbjct: 255 IQGKFDLIISNPPFHDGI 272


>gi|288554716|ref|YP_003426651.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4]
 gi|288545876|gb|ADC49759.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4]
          Length = 201

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+D   AF++P +       +LD+G G G + LA+       +   VD++ +AL++A
Sbjct: 46  SRLLID---AFTMPEVSGA----LLDVGCGYGPIGLAVASIDKEREVHMVDVNVRALDLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           + NA+ NG+S   D  +SD    V+G  +  I++NPP
Sbjct: 99  RKNAMNNGIS-NVDIYESDTLGQVKGDQYAAILTNPP 134


>gi|313664901|ref|YP_004046772.1| methyltransferase small domain protein [Mycoplasma leachii PG50]
 gi|312949410|gb|ADR24006.1| methyltransferase small domain protein [Mycoplasma leachii PG50]
          Length = 240

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +I D GT    + L L K +   K +GV+I  KA+EIAK N   N + E+ + + +D   
Sbjct: 43  KICDFGTNNAVIPLILSKYTRA-KIIGVEIQHKAVEIAKQNIKLNNLEEQIEIVHTDIKE 101

Query: 158 FSSVEGL-FDVIVSNPPYIE 176
           FS +    FD++V NPP+ +
Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121


>gi|307155281|ref|YP_003890665.1| type 12 methyltransferase [Cyanothece sp. PCC 7822]
 gi|306985509|gb|ADN17390.1| Methyltransferase type 12 [Cyanothece sp. PCC 7822]
          Length = 399

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +   R+ +RILD G GTG     L+  +P  + VG+D+S KALEIA+     
Sbjct: 41  AAYNFCCGQKPPRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERCRR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVS 170
           +GVS +      F  L+ +  S + G FD+I S
Sbjct: 101 SGVSAKHGSTVSFHHLKLEEASQLSGEFDLINS 133


>gi|75906230|ref|YP_320526.1| methyltransferase [Anabaena variabilis ATCC 29413]
 gi|75699955|gb|ABA19631.1| probable methyltransferase [Anabaena variabilis ATCC 29413]
          Length = 267

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156
           RILDLG GTG + L +L+  P  + + +D S + LE A+    ++G  ER+  LQ+   D
Sbjct: 72  RILDLGCGTGELSLKILQRCPNAQVIALDYSPRMLEFAQHKIASSGYKERWTGLQADFGD 131

Query: 157 WFSSVEGL-----FDVIVSN 171
           W  + E L     FD  VS+
Sbjct: 132 WAINPETLNIGNEFDACVSS 151


>gi|297560902|ref|YP_003679876.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845350|gb|ADH67370.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 223

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 21/95 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           R+LDLG G G + L +   +P  + +GVD++ +A+ +A+ NA  +G+ + RF  ++ +  
Sbjct: 61  RLLDLGCGYGPIALTMASRAPGARVLGVDVNARAVGLARRNAAEHGLDNARFAVVEPEGG 120

Query: 159 SSVE--------------------GLFDVIVSNPP 173
            SVE                    G FD + SNPP
Sbjct: 121 LSVERGASGEGAPARDDVTAQDLLGPFDAVWSNPP 155


>gi|290960213|ref|YP_003491395.1| methyltransferase [Streptomyces scabiei 87.22]
 gi|260649739|emb|CBG72855.1| putative methyltransferase [Streptomyces scabiei 87.22]
          Length = 260

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELLV      +L R       R+LD+GTGTGAV LA  +         VDIS 
Sbjct: 14  YAPQDDTELLV-----HALGREPLAPRARVLDVGTGTGAVALAAARRGADV--TAVDISR 66

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           +A+   + NA+   +      ++ D    V E  FD+I+SNPPY+  
Sbjct: 67  RAVLNTRVNALLARLP--VTVVRGDLLGPVAERSFDLILSNPPYVPG 111


>gi|268679933|ref|YP_003304364.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
 gi|268617964|gb|ACZ12329.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
          Length = 233

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L ++ P  +   +DI  K  EIA +NA+ N +     T +     
Sbjct: 32  RVLDVGCGCGILGLLLKRDFPTLEVHLLDIQAKNCEIAHANALANHLEMEAFTCKDFLEE 91

Query: 160 SVEGLFDVIVSNPPYIESVIV 180
             E  FD I+SNPP+    +V
Sbjct: 92  RFEFKFDFIISNPPFYHQGVV 112


>gi|158148277|emb|CAP12595.1| ElmF protein [Streptomyces olivaceus]
          Length = 399

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 30/215 (13%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS---LKHE---SIHRILG-- 56
           R + +F  RV  LSS  V VD  +VL  R+   + +A   +   L      S+H +LG  
Sbjct: 96  RQAQAFRSRV--LSSLLVPVDEGAVLALRRAPDIRDACAEAGCPLDRPFVCSLHALLGMT 153

Query: 57  ----WRDFYNVRLTLSSDTFEPR-----PETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
               WR        L      PR     P+    VD     +LP    R +V   D+GTG
Sbjct: 154 GAREWRRKGVEVPALGGARIHPRYGVFAPQRGEYVDLVARATLPDTGARPLV-AFDIGTG 212

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           TG V  A+L      + V  D++ +AL  A+ N    G++ER   +++D F        +
Sbjct: 213 TG-VLAAVLARRGVPEVVATDLNPRALACARENLDRLGLAERVTVMEADLFPPRR-RASL 270

Query: 168 IVSNPPY--------IESVIVDCLGLEVRDFDPRI 194
           +V NPP+        +ES + D  G  +R F  R+
Sbjct: 271 VVCNPPWLPAKPTSELESAVYDPGGRMLRAFLERL 305


>gi|240948233|ref|ZP_04752619.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           NM305]
 gi|240297272|gb|EER47813.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           NM305]
          Length = 328

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 82  VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +D      L    K D ++  +LDLG G G +  +L K  P  K    DI   AL  ++ 
Sbjct: 171 LDGGTKLLLSTFHKADGLKGDVLDLGCGAGVIGASLKKMFPKIKLTMSDIHAMALASSER 230

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               N +  +   + SD FS ++G FD+I+SNPP+ + +
Sbjct: 231 TLAENQLEGK--VIASDVFSHIDGRFDLIISNPPFHDGI 267


>gi|239982473|ref|ZP_04704997.1| putative methylase [Streptomyces albus J1074]
 gi|291454321|ref|ZP_06593711.1| modification methylase [Streptomyces albus J1074]
 gi|291357270|gb|EFE84172.1| modification methylase [Streptomyces albus J1074]
          Length = 132

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%)

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G   V+V+N PY+ +  +  L  E R  +PR++LDGG DGL+  R +A    R L   
Sbjct: 28  LRGRVAVLVANVPYVPTADLPLLPSEARTHEPRVALDGGDDGLAVLRRVAAEAGRWLAPG 87

Query: 221 GLCSVEIGYNQ 231
           G   VE    Q
Sbjct: 88  GTLLVETTGRQ 98


>gi|213401603|ref|XP_002171574.1| mitochondrial N(5)-glutamine methyltransferase MTQ1
           [Schizosaccharomyces japonicus yFS275]
 gi|211999621|gb|EEB05281.1| mitochondrial N(5)-glutamine methyltransferase MTQ1
           [Schizosaccharomyces japonicus yFS275]
          Length = 303

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 18/229 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGT 106
           +  +LG   F  + L      F PR ET   V   L +     E+       + ++D+ T
Sbjct: 62  LQYVLGSESFGPLNLQCRKGVFIPRWETYEWVLRCLPYMKQLYEQAHDDSRPLEVVDMCT 121

Query: 107 GTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           G+G  C+A    S     V    +D+S KAL +A+ N        R   +++D    V+ 
Sbjct: 122 GSG--CIAQFVASALHDRVHVTAIDVSMKALALARHNNREEVCRGRVGFVRADVLKQVDV 179

Query: 164 LF------DVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR- 215
                   DV++ NPPYI    +V      VR ++P ++L     G + YR +   + R 
Sbjct: 180 WLPFVARCDVLLCNPPYISDADLVRVTSSSVRRYEPLLALCADECGDAFYRKVLREIHRA 239

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +    + E+G  ++   V    S   +  + +KD  G +R +   R
Sbjct: 240 AVYRPRYIAFEVGDKEQAKRVVQLASPH-WNASIWKDSAGLERCVFLER 287


>gi|170721831|ref|YP_001749519.1| methyltransferase small [Pseudomonas putida W619]
 gi|169759834|gb|ACA73150.1| methyltransferase small [Pseudomonas putida W619]
          Length = 317

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 95  KRDVVRI---LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +R  VRI   +D+G G+G   L + + +   +   VDI+  AL     NA   GVS    
Sbjct: 132 QRSPVRIERAVDIGCGSGVGALLVARAAQHAQVCAVDINPVALRYTAINAALAGVSN-VS 190

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYI 175
              SD  + + G FD+IV+NPPY+
Sbjct: 191 IAHSDLLAGISGNFDLIVANPPYM 214


>gi|323141894|ref|ZP_08076755.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413641|gb|EFY04499.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp.
           YIT 12067]
          Length = 311

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 35/166 (21%)

Query: 57  WRDFYNVR-------LTLSSDTFEPRP-ETELLVDSALAFS----------LPRIEKRDV 98
           W+ +++V        +  S + + P+  E  + +D  +AF           + R+EK  V
Sbjct: 113 WKQYFHVTHVGKSLVIKPSWEEYAPKEGEHVIEIDPGMAFGTGTHHTTNMMMERLEK--V 170

Query: 99  VR----ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +     + D+GTG+G  A+  A+L          VDI   A+ +AK N   NG+SE+ + 
Sbjct: 171 ITPDSTVFDVGTGSGILAIAAAMLGAKSVK---AVDIDGVAVRVAKENVADNGLSEQIEV 227

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            + D     EG  DVI++N      +I D + + ++D   +++ +G
Sbjct: 228 REGDLLHGTEGKADVIIAN------IIADIVIMLLQDIPQKLNDNG 267


>gi|300786180|ref|YP_003766471.1| methyltransferase [Amycolatopsis mediterranei U32]
 gi|299795694|gb|ADJ46069.1| methyltransferase [Amycolatopsis mediterranei U32]
          Length = 239

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 17/111 (15%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----V 127
           + P+ +T LL  +    ++P        R LDL TGTGA  + L +     +G G    V
Sbjct: 36  YRPQEDTALLASAIAELAIP-----AGARALDLCTGTGAQAITLAR-----RGAGTVLAV 85

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           D+S +AL  A+ NA+   ++ R    +     ++ EG FDV+V+NPPY+ S
Sbjct: 86  DLSRRALASARLNALVRQLAVR--PCRGGLARALREGPFDVVVANPPYVPS 134


>gi|29833736|ref|NP_828370.1| methyltransferas [Streptomyces avermitilis MA-4680]
 gi|29610860|dbj|BAC74905.1| putative methyltransferase [Streptomyces avermitilis MA-4680]
          Length = 221

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T+LL     A +L R +      +LDLGTG+GA  LA+       +   VDIS 
Sbjct: 16  YAPQHDTDLL-----ARALRREDIDTSTEVLDLGTGSGA--LAVHAARLGARVTAVDISR 68

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +A+  A+ NA+  G   R    + D  ++V G  +D++VSNPPY+ S
Sbjct: 69  RAVLTARLNALLAG--RRVTVRRGDLTAAVPGRSYDLVVSNPPYVPS 113


>gi|85859820|ref|YP_462022.1| methyltransferase [Syntrophus aciditrophicus SB]
 gi|85722911|gb|ABC77854.1| methyltransferase [Syntrophus aciditrophicus SB]
          Length = 254

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 6/79 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + L      P  +  G+DI  + +E+A  +A  N + ER  T ++    S
Sbjct: 48  LLDMGTGSGVIALITAMRRPDVRIAGIDIQEEMVEMASRSAALNSLEERL-TFKAGDIHS 106

Query: 161 VEGL-----FDVIVSNPPY 174
           +  +     FD +V NPPY
Sbjct: 107 IRRIFDSESFDAVVVNPPY 125


>gi|313114746|ref|ZP_07800248.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622971|gb|EFQ06424.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 304

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVV---------- 99
           GWR +Y+      RL +     +   +  +L++D  LAF     E   +           
Sbjct: 108 GWRKYYHPLEIGKRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCMEALDERVTG 167

Query: 100 --RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A LK        GVDI   A+  A  NA  NGV ++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIAALKLGAAV-AEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGKYDIITAN 240


>gi|260829457|ref|XP_002609678.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae]
 gi|229295040|gb|EEN65688.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae]
          Length = 1095

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 16/155 (10%)

Query: 105  GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
            G G  A+  A   E    + + +DI    LE A+ NA   GV++R + LQ D+    EGL
Sbjct: 947  GVGGNAIQFAFTCE----RVIAIDIDPVKLECARHNAAIYGVADRIEFLQGDYLHLAEGL 1002

Query: 165  -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS----RHLNK 219
              DV+  +PP+      D L  +V D    I  D G +     + I D ++    R+ + 
Sbjct: 1003 KADVVFLSPPWGGP---DYLTADVFDIKTMIVPD-GYEIFEKTKQITDNIAYFVPRNADV 1058

Query: 220  DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            + L S+  G   KV+V + F +RKL  V A+  YG
Sbjct: 1059 EQLVSLA-GPGGKVEVEQNFLNRKLKTVTAY--YG 1090


>gi|55820852|ref|YP_139294.1| hypothetical protein stu0800 [Streptococcus thermophilus LMG 18311]
 gi|55822767|ref|YP_141208.1| hypothetical protein str0800 [Streptococcus thermophilus CNRZ1066]
 gi|55736837|gb|AAV60479.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738752|gb|AAV62393.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 213

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L K     +   +DI+ +A+++AK NA  NGV       QS+ + +
Sbjct: 78  LLDVGCGYGPLGISLAKVQGV-QSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYEN 134

Query: 161 VEGLFDVIVSNPP 173
           V   FD I+SNPP
Sbjct: 135 VSEKFDYIISNPP 147


>gi|283769526|ref|ZP_06342422.1| conserved hypothetical protein [Bulleidia extructa W1219]
 gi|283103794|gb|EFC05180.1| conserved hypothetical protein [Bulleidia extructa W1219]
          Length = 209

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 3/82 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E  D   +LD+G   GA+ L   KE     G+GVD+  + LE AK NA+ N V+ +F  
Sbjct: 28  LEVYDGETVLDIGCNQGAL-LYYAKEKADIIGIGVDVFSEVLESAKENAIYNRVNFQFVC 86

Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174
            +   + +   L DVIV NPPY
Sbjct: 87  SRIQEYKA--ELVDVIVCNPPY 106


>gi|326334037|ref|ZP_08200266.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Nocardioidaceae bacterium Broad-1]
 gi|325948186|gb|EGD40297.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Nocardioidaceae bacterium Broad-1]
          Length = 231

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 10/167 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+L +G G + L L       + V VD    A   A++NA   G+S   +   S    +
Sbjct: 51  MLELCSGAGQIGL-LAAALVGRRLVCVDADPVACAFARANAERAGLSHLVEVRHSSMDQA 109

Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++    F +++++PP++ +  V          DP +++DGG DG+   RT     +RHL+
Sbjct: 110 LDPDERFHLVIADPPWVPTAQVGRY-----PEDPLLAIDGGADGMQVARTCLATTARHLS 164

Query: 219 KDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             G   +++G   + D V+++ E   L  V   +D  G   ++   R
Sbjct: 165 PGGAAVLQLGTTDQADRVLQLLEGSDLA-VEEVRDSPGEGVLVHIAR 210


>gi|326203864|ref|ZP_08193726.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
 gi|325985962|gb|EGD46796.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
          Length = 198

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 3/76 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+G G GA+ L +    P      +D++ +ALE  K NA +N +S   + L S+ F
Sbjct: 59  LSVLDIGCGYGAIGLFIKSIFPQQTITMIDVNNRALEYTKKNAASNNLS--IEALNSNLF 116

Query: 159 SSV-EGLFDVIVSNPP 173
           SS+ E  FD I+SNPP
Sbjct: 117 SSLNERTFDDIISNPP 132


>gi|226713004|sp|Q8EIL1|RSMC_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   LLK  P      +DI+  AL   +     NG+  +     SD  +
Sbjct: 204 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAK--VYPSDGLA 261

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 262 QTSGKFDGIISNPPF 276


>gi|319937658|ref|ZP_08012061.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
 gi|319807093|gb|EFW03707.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
          Length = 201

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L KE P+     VD++ +A+ +A  +   N V E      S  + +
Sbjct: 61  LLDVGCGYGTLGVSLKKEYPWLHVEMVDVNERAVHLANQSCQYNDV-EDIKAYLSFAYEN 119

Query: 161 VEGLFDVIVSNPP 173
           V G FDVIVSNPP
Sbjct: 120 VVGTFDVIVSNPP 132


>gi|91785360|ref|YP_560566.1| hypothetical protein Bxe_A0419 [Burkholderia xenovorans LB400]
 gi|91689314|gb|ABE32514.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 374

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  D+GTGTG V  ALL +    K +  D   +AL  A+ N    G   + + +Q+D F 
Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIIATDQDPRALACARENLTRLGYDRQVEVVQADLFP 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             EG   ++V NPP++ +     +   + D + R+ L G ++GLS +
Sbjct: 257 --EGRAPLVVCNPPWLPARPASPIEYAIYDPESRMLL-GFLNGLSEH 300


>gi|218439584|ref|YP_002377913.1| methyltransferase type 12 [Cyanothece sp. PCC 7424]
 gi|218172312|gb|ACK71045.1| Methyltransferase type 12 [Cyanothece sp. PCC 7424]
          Length = 399

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +   R+ +RILD G GTG     L+  +P  + VG+D+S KALEIA+  +  
Sbjct: 41  AAYNFCTRQKPSRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERSRR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GVS +      F  L+ +  S + G FD+I
Sbjct: 101 SGVSAKHEASVSFHHLKLEEASQLPGEFDLI 131


>gi|23014220|ref|ZP_00054048.1| COG4123: Predicted O-methyltransferase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 250

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   RILDLG G GA  L LL   P     G++I      +A+ NAV N     F  
Sbjct: 39  VPARPGERILDLGCGVGAAALCLLARCPDVVVEGLEIQGPLAGLARRNAVLNEAERGFAV 98

Query: 153 LQSDWFSSVEGL--FDVIVSNPPYIES 177
              D      GL  F  +++NPP+ ES
Sbjct: 99  HAGDAARPPAGLGGFHHVMTNPPFFES 125


>gi|323486486|ref|ZP_08091809.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163]
 gi|323694373|ref|ZP_08108546.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673]
 gi|323400189|gb|EGA92564.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163]
 gi|323501613|gb|EGB17502.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673]
          Length = 245

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + LDLGTGTG + + L  ++      G++I  +  ++A  +   NG+ +R D ++ D   
Sbjct: 48  KALDLGTGTGIIPILLEAKTKGEHFTGLEIQEEMADMASRSVELNGLKDRIDIIRGDIKE 107

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRD 189
           +  GL      FDV+ +NPPY+     DC GL+  D
Sbjct: 108 A--GLIFGGASFDVVTTNPPYMN----DCHGLKNPD 137


>gi|312863385|ref|ZP_07723623.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
 gi|322516989|ref|ZP_08069879.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
           49124]
 gi|311100921|gb|EFQ59126.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
 gi|322124472|gb|EFX95967.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
           49124]
          Length = 196

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 9/76 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LD+G G G + ++L K     +GV V   DI+ +A+++AK NA  N V       QS+ 
Sbjct: 61  VLDVGCGYGPLGISLAK----VQGVKVTMIDINSRAIDLAKQNAERNKVEATI--FQSNI 114

Query: 158 FSSVEGLFDVIVSNPP 173
           + +V G FD ++SNPP
Sbjct: 115 YKNVTGSFDYVISNPP 130


>gi|269929311|ref|YP_003321632.1| methylase [Sphaerobacter thermophilus DSM 20745]
 gi|269788668|gb|ACZ40810.1| methylase [Sphaerobacter thermophilus DSM 20745]
          Length = 566

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 3/82 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG+G    A++      + V VDI+  A+  A+ NA +NGV++R +  Q D F+ 
Sbjct: 399 VLDLGTGSG--VGAIVAARRAARVVAVDINPAAVRCAQINAASNGVNDRVEVRQGDLFAP 456

Query: 161 VEG-LFDVIVSNPPYIESVIVD 181
           V G  FD+++ NPP+      D
Sbjct: 457 VAGERFDLVLFNPPFYRGTPRD 478


>gi|251782462|ref|YP_002996764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391091|dbj|BAH81550.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 210

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G + ++L K     +   VDI+ +A+++A+ NA  N V       QS+ + 
Sbjct: 71  RVLDLGCGYGPLGISLAKVQEV-EATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYE 127

Query: 160 SVEGLFDVIVSNPP 173
           +V G F+ I+SNPP
Sbjct: 128 NVRGSFNHIISNPP 141


>gi|24372417|ref|NP_716459.1| hypothetical protein SO_0828 [Shewanella oneidensis MR-1]
 gi|24346386|gb|AAN53904.1|AE015527_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 353

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   LLK  P      +DI+  AL   +     NG+  +     SD  +
Sbjct: 215 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAK--VYPSDGLA 272

Query: 160 SVEGLFDVIVSNPPY 174
              G FD I+SNPP+
Sbjct: 273 QTSGKFDGIISNPPF 287


>gi|325578684|ref|ZP_08148760.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159723|gb|EGC71854.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 330

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   + K  P  +    DI   A++ A+     N +    + + SD FS
Sbjct: 193 KVLDVGCGAGVIGSMIKKYHPKTEVTMTDIHAMAIQSARQTLAENQLEG--NVIASDVFS 250

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +EG FD+I+SNPP+ + +
Sbjct: 251 HIEGKFDLIISNPPFHDGI 269


>gi|78358540|ref|YP_389989.1| hypothetical protein Dde_3501 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220945|gb|ABB40294.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 275

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R LD GTG G V LAL       +G G DI  +  + A  NA   G+  RF  +Q+D  
Sbjct: 56  LRFLDAGTGCGVVGLALCLLLDTVQGTGFDIDPQLADAATHNAAMLGLGNRFSAVQADAQ 115

Query: 159 SS------VEGLFDVIVSNPPY 174
                       FD++V+NPPY
Sbjct: 116 QVRAHADITPESFDLVVTNPPY 137


>gi|260775422|ref|ZP_05884319.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608603|gb|EEX34768.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 239

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   + +P      +DI   AL+ +K N  ++  S R   L+ D  S 
Sbjct: 46  LLDIGTGTGLLALMCAQRNPDCVIDAIDIDQHALQASKENFTSSPWSSRLSLLEGDVLSF 105

Query: 160 SVEGLFDVIVSNPPYIES 177
             E  +D IV NPPY  S
Sbjct: 106 PFETSYDAIVCNPPYFNS 123


>gi|159149040|dbj|BAF92588.1| methyltransferase [Streptomyces pactum]
 gi|212379246|gb|ACJ24862.1| HemK family methyltransferase [Streptomyces pactum]
          Length = 358

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 12/128 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +RDV   LDLG GTG + L+  +       V V+  C A   A  NA  NG+ ER   ++
Sbjct: 147 RRDVRTALDLGCGTGILGLSAARNGADVVSVDVNPECTA--AATVNAHINGLGERLTAVE 204

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  S  ++  FD+++SNPP        CL L  R     ++ + G+DGL  +  +   V
Sbjct: 205 GDIMSLDLDRRFDLVISNPP--------CLPLR-RGSLGWLAGEAGLDGLEFFWELLRRV 255

Query: 214 SRHLNKDG 221
              L  +G
Sbjct: 256 PGLLTGEG 263


>gi|300775903|ref|ZP_07085763.1| methyltransferase [Chryseobacterium gleum ATCC 35910]
 gi|300505453|gb|EFK36591.1| methyltransferase [Chryseobacterium gleum ATCC 35910]
          Length = 230

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +L++GTGTG + L L + +P  + +G+DI+  A ++ + N   +    R      D+ + 
Sbjct: 39  VLEVGTGTGLISLMLAQRNPHAEFLGLDINEDAAQLTRLNFENSPFRLRLKNSHQDFKTF 98

Query: 160 SVEGLFDVIVSNPPYIE 176
                FD+IVSNPPY E
Sbjct: 99  ETSDRFDLIVSNPPYFE 115


>gi|309779561|ref|ZP_07674322.1| methyltransferase [Ralstonia sp. 5_7_47FAA]
 gi|308921802|gb|EFP67438.1| methyltransferase [Ralstonia sp. 5_7_47FAA]
          Length = 384

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +    + +G D   +AL  A+ N    G+  + D + +D F   E
Sbjct: 210 DIGTGTG-VLAAVLAKRGVKRVIGTDQDPRALACARENLARLGLQAQVDVVDADLFP--E 266

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D D R+ L G ++GL+ +
Sbjct: 267 GRAPLIVCNPPWLPARPSSPIERAVYDPDSRM-LRGFLEGLAAH 309


>gi|217977297|ref|YP_002361444.1| methyltransferase small [Methylocella silvestris BL2]
 gi|217502673|gb|ACK50082.1| methyltransferase small [Methylocella silvestris BL2]
          Length = 257

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G GA  +AL    P  +   V+I  +A E+A+ N   NG+++R    ++D  S 
Sbjct: 50  VLDIGAGVGAASIALAATRPGARIGLVEIDAEAAELARKNLDLNGIAQRGRVFEADALSP 109

Query: 161 ----VEGL----FDVIVSNPPYIESV 178
                 GL     D+++SNPP+++  
Sbjct: 110 PSRRAAGLADETADLVISNPPFLDPA 135


>gi|315649712|ref|ZP_07902796.1| methyltransferase small [Paenibacillus vortex V453]
 gi|315274900|gb|EFU38276.1| methyltransferase small [Paenibacillus vortex V453]
          Length = 201

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E +    +LD+G G G + L   K         +DI+ +A+E+AK NA  NG+S     
Sbjct: 54  MEFQQNASVLDVGCGYGPIGLTAAKMVVDGHVTMIDINSRAVELAKENARRNGIS-NVTI 112

Query: 153 LQSDWFSSVE-GLFDVIVSNPP 173
           L+SD F+ V+   FDVI++NPP
Sbjct: 113 LESDLFAVVKDQQFDVILTNPP 134


>gi|292558414|gb|ADE31415.1| Methyltransferase [Streptococcus suis GZ1]
          Length = 196

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K     K   +DI+ +AL++A  NA  NGV+ +    QS+ + +
Sbjct: 61  VLDVGCGYGPIGLTLAKVFST-KTTLIDINSRALDLATKNAERNGVTAKI--YQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V+  F+ IVSNPP
Sbjct: 118 VDETFNHIVSNPP 130


>gi|90021563|ref|YP_527390.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans
           2-40]
 gi|89951163|gb|ABD81178.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans
           2-40]
          Length = 361

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 19/134 (14%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           AI   L  +S   + GW+ F                  +L     +AF   R        
Sbjct: 182 AICCDLPMQSKPGVYGWKKF------------------DLATQQLIAFIKQRYNNLKEHT 223

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+G + +A+ K          D +  A+   + N +TN ++E    +  D   S
Sbjct: 224 VLDLGCGSGYLSIAV-KTLHCRSLTATDNNAAAVLATQQNLITNNLAEAAQVVADDCAQS 282

Query: 161 VEGLFDVIVSNPPY 174
           ++G+FD++V NPP+
Sbjct: 283 IQGMFDLVVCNPPF 296


>gi|330503343|ref|YP_004380212.1| methyltransferase small [Pseudomonas mendocina NK-01]
 gi|328917629|gb|AEB58460.1| methyltransferase small [Pseudomonas mendocina NK-01]
          Length = 322

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI D+G G G   +   +  P  + + +DI+ KAL +   NA   G+       +SD   
Sbjct: 140 RIADIGCGAGPGAITAAQLRPGAEVMALDINHKALAMTAVNARQAGIYN-LRVQRSDLLR 198

Query: 160 SVEGLFDVIVSNPPYI 175
            V G FD+I++NPPY+
Sbjct: 199 DVSGQFDLIIANPPYM 214


>gi|313890214|ref|ZP_07823849.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121575|gb|EFR44679.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 196

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L K       + +DI+ +A+E+A+ NA  N V       QS+ + +
Sbjct: 61  LLDVGCGYGPLGISLAKAQGVIATL-IDINNRAIELAQKNATYNKV--EVAIYQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V G FD I+SNPP
Sbjct: 118 VTGQFDHIISNPP 130


>gi|306836276|ref|ZP_07469258.1| transferase [Corynebacterium accolens ATCC 49726]
 gi|304567868|gb|EFM43451.1| transferase [Corynebacterium accolens ATCC 49726]
          Length = 525

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  +LDLGTG+G   L  L+ +        D+  +AL++A +     G S   + ++  W
Sbjct: 163 VSTVLDLGTGSGVQLLGQLECARSI--TATDVHRRALDLAGATVAAAGSSPEVELIEGSW 220

Query: 158 FSSVEG-LFDVIVSNPPYI 175
           F  V G  FD IV+NPP++
Sbjct: 221 FEPVAGRTFDRIVANPPFV 239


>gi|262091715|gb|ACY25305.1| 16S RNA G1207 methylase RsmC [uncultured actinobacterium]
          Length = 225

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+D+A     PR         LDLG G+GA+ +AL   SP  K   +D++ +AL++ 
Sbjct: 71  TQILLDAA-----PRPSTTG--NFLDLGCGSGAIAMALASYSPEAKVWAIDVNARALQLV 123

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             NA  NG+              ++  FD+I SNPP
Sbjct: 124 GENAQRNGLGNITALFPQSVSPDIQ--FDLIWSNPP 157


>gi|257465571|ref|ZP_05629942.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           202]
 gi|257451231|gb|EEV25274.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           202]
          Length = 328

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 82  VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +D      L    K D ++  +LDLG G G +  +L K  P  K    DI   AL  ++ 
Sbjct: 171 LDGGTKLLLSTFHKADGLKGNVLDLGCGAGVIGASLKKMFPKIKLTMSDIHAMALASSER 230

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               N +  +   + SD FS ++G FD+I+SNPP+ + +
Sbjct: 231 TLAENQLEGK--VVASDVFSHIDGRFDLIISNPPFHDGI 267


>gi|239618491|ref|YP_002941813.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
 gi|239507322|gb|ACR80809.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
          Length = 204

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           R+LDLG G G + + L KE+P       D++ +ALE AK NA  N +    R   L   W
Sbjct: 66  RLLDLGCGYGVIGITLKKENPDISLCMSDVNERALEFAKINAKNNNIVADIRLGNLYEPW 125

Query: 158 FSSVEGLFDVIVSNPP 173
              +   FD IV NPP
Sbjct: 126 KDEI---FDNIVCNPP 138


>gi|119718182|ref|YP_925147.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119538843|gb|ABL83460.1| methyltransferase small [Nocardioides sp. JS614]
          Length = 222

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 28/188 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           F  +R++       PRP T    + A   LA + P         +L+L  G G + L  +
Sbjct: 24  FGPLRISFDGRVLRPRPWTAAQSEWAAEILADAPPG-------PVLELCAGAGQIGLLAV 76

Query: 117 KES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSN 171
             S  P    V VD++  A + A++NA   G+++R +  +      V G    F +++++
Sbjct: 77  AGSDRPL---VCVDVNPVACDYARANAQAAGLADRVEVREGS-VHEVLGDSERFALVIAD 132

Query: 172 PPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           PP++          EV  F  DP +++DGG DG++      D    HL +     +++G 
Sbjct: 133 PPWVRRE-------EVARFPEDPVLAIDGGADGMALAWLCIDTARPHLPRGASVLLQLGS 185

Query: 230 NQKVDVVR 237
            ++VD++R
Sbjct: 186 VEQVDLLR 193


>gi|260906701|ref|ZP_05915023.1| hypothetical protein BlinB_15332 [Brevibacterium linens BL2]
          Length = 439

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE      SA   S P+          DLGTGTG +   LL+     + V  DI+ +A+ 
Sbjct: 245 PEASAPQSSAPEPSAPQT-------AFDLGTGTGVLAAVLLRRG-VERVVATDINPRAVA 296

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A+ N    G++   + +++D F S  G  D+IV NPP++ +       LE   +DP   
Sbjct: 297 CAQENLDRLGLASSAEVVEADLFPS--GRADLIVCNPPWLPARPTSA--LEAGIYDPGSD 352

Query: 196 -LDGGIDGLSHY 206
            L   IDGL+ Y
Sbjct: 353 VLHRFIDGLAAY 364


>gi|323706288|ref|ZP_08117854.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534340|gb|EGB24125.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 248

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG GTG + + +  +S   + VGV+I  +   IA  N   N    R D +  D  +
Sbjct: 45  KIVDLGCGTGIIPILIAGKSRDTRIVGVEIQSEVANIAIRNVYLNNFEGRIDIINDDIRN 104

Query: 160 SVEGL----FDVIVSNPPYI 175
            V+ L    +D++ SNPPY+
Sbjct: 105 VVDKLGIEKYDIVTSNPPYM 124


>gi|226360731|ref|YP_002778509.1| hypothetical protein ROP_13170 [Rhodococcus opacus B4]
 gi|226239216|dbj|BAH49564.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 377

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + +  D+GTGTG V  A+L      K +  ++   AL  A++N    G S+R   +++D 
Sbjct: 194 LAKAFDIGTGTG-VLAAVLAHRGVEKVISTELDANALACARANLDRLGYSDRVQVVETDL 252

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           F   EG   ++V NPP+I +     +   + D D R+ L G + GL+ +
Sbjct: 253 FP--EGRAPLVVCNPPWIPARPTSPIEYAIYDPDSRM-LRGFLAGLAEH 298


>gi|284041963|ref|YP_003392303.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283946184|gb|ADB48928.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 372

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 5/81 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R LDL TG+G   LA L ++     V V+I     E A+ NA+ NG+ ER D    D 
Sbjct: 159 VERALDLCTGSG--LLASLLDAR--HTVAVEIDPDVAEAARFNAILNGLEERIDVRAGDL 214

Query: 158 FSSVEG-LFDVIVSNPPYIES 177
           +++V G  F++IV+NPP++ +
Sbjct: 215 YAAVPGERFELIVANPPFLPT 235


>gi|312142729|ref|YP_003994175.1| methyltransferase small [Halanaerobium sp. 'sapolanicus']
 gi|311903380|gb|ADQ13821.1| methyltransferase small [Halanaerobium sp. 'sapolanicus']
          Length = 241

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 6/97 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L  +  ++ + D   ++DLGTG+G + L L  ++   K  GV+I     ++A+ N  
Sbjct: 26  DSVLLANFVKLRRGD--NVIDLGTGSGVIPLLLAYKNQGVKVSGVEIQKPLADLAQRNVE 83

Query: 143 TNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
            N + ++   +  D     +    G FDV+VSNPPY+
Sbjct: 84  LNQMDDKIKIINQDLCPLKQEMEAGSFDVVVSNPPYL 120


>gi|229579608|ref|YP_002838007.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14]
 gi|228010323|gb|ACP46085.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14]
          Length = 186

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + L  ++   K   VD++  A+++AK NA  NGV  R   L+SD F +
Sbjct: 49  VADVGCGYGPIGIYLALKNHNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIILKSDIFDN 108

Query: 161 --VEGLFDVIVSNPP 173
             VE  F+ I SNPP
Sbjct: 109 VPVEVKFNAIYSNPP 123


>gi|238761895|ref|ZP_04622869.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           kristensenii ATCC 33638]
 gi|238700009|gb|EEP92752.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           kristensenii ATCC 33638]
          Length = 347

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G +   L  + P  K    D+S  A+E +++    N +  +   + S+ +S 
Sbjct: 200 ILDVGCGAGVLASVLAPKMPKIKWTLSDVSAAAIESSRATLAANNIDAQ--VIASNVYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++G F++I+SNPP+ + +       E+
Sbjct: 258 IKGRFEMIISNPPFHDGIQTSLTAAEL 284


>gi|209884397|ref|YP_002288255.1| ribosomal protein L11 methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209872593|gb|ACI92389.1| ribosomal protein L11 methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 283

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 16/98 (16%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIA 137
           LL+D  L    PR       R+LDLGTGTG + +A  K    P       DI  +++ +A
Sbjct: 131 LLLDRVLHRRAPR-------RVLDLGTGTGVLAIAAAKALRRPILAS---DIDPQSVLVA 180

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
             NAV NGV +  +T Q+  F S      G FD++++N
Sbjct: 181 HDNAVLNGVGQYVETFQAIGFGSPRFAQAGPFDLVLAN 218


>gi|116627670|ref|YP_820289.1| hypothetical protein STER_0852 [Streptococcus thermophilus LMD-9]
 gi|116100947|gb|ABJ66093.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus thermophilus
           LMD-9]
 gi|312278193|gb|ADQ62850.1| Methyltransferase small domain protein [Streptococcus thermophilus
           ND03]
          Length = 196

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + ++L K     +   +DI+ +A+++AK NA  NGV       QS+ + +
Sbjct: 61  LLDVGCGYGPLGISLAKVQGV-QSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V   FD I+SNPP
Sbjct: 118 VSEKFDYIISNPP 130


>gi|228470842|ref|ZP_04055689.1| methyltransferase small [Porphyromonas uenonis 60-3]
 gi|228307409|gb|EEK16419.1| methyltransferase small [Porphyromonas uenonis 60-3]
          Length = 238

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +  S R   L  D  +
Sbjct: 34  QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRSPYSNRLTALSCDITA 93

Query: 160 SVEGL----FDVIVSNPPYIESV 178
               L    +D+IVSNPPY + +
Sbjct: 94  PELALPLRHYDLIVSNPPYYDGL 116


>gi|313224250|emb|CBY20039.1| unnamed protein product [Oikopleura dioica]
          Length = 427

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  A   E    + + +DI  + +E+AK NA   GV +R + +  D+F  +  L
Sbjct: 233 GVGGNAIQFAFTCE----RVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKIIPSL 288

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADGVSRH 216
             DV+  +PP+     +D    +++D        GG+DGL  YR        IA  V R+
Sbjct: 289 RPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYFVPRN 341

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +   L  +  G +Q+V+V +   + K   + A+
Sbjct: 342 TDSAQLAWL-AGEDQQVEVEQNMLNYKTKTITAY 374


>gi|227522505|ref|ZP_03952554.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227090327|gb|EEI25639.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 202

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + LA+ K  P      VD++  AL +A+ NA  NG+S       S+ +S
Sbjct: 64  NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAKANGISN-VRIFASNSYS 122

Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISL 196
           +++  +  IV+NPP    + V+ D +   V    P  +L
Sbjct: 123 NIKDNYAAIVTNPPVRAGKKVVDDMITGAVSHLKPNATL 161


>gi|227510689|ref|ZP_03940738.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227513705|ref|ZP_03943754.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227083024|gb|EEI18336.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227189810|gb|EEI69877.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 202

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + LA+ K  P      VD++  AL +A+ NA  NG+S       S+ +S
Sbjct: 64  NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAQANGISN-VRIFASNSYS 122

Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISL 196
           +++  +  IV+NPP    + V+ D +   V    P  +L
Sbjct: 123 NIKDNYAAIVTNPPVRAGKKVVDDMITGAVSHLKPNATL 161


>gi|226294709|gb|EEH50129.1| hypothetical protein PADG_06208 [Paracoccidioides brasiliensis
           Pb18]
          Length = 474

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 15/107 (14%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALAFSLPRIEKRDVVRILD 103
           +  ILG + F  + +        PRPETE        L+ S   F     E    +RILD
Sbjct: 105 LQYILGDQPFGELEILCRRGVLIPRPETESYTTRTANLLLSKFKFKSESQEHPPALRILD 164

Query: 104 LGTGTGAVCLALLKES------PFFKGVGVDISCKALEIAKSNAVTN 144
           L TGTG  C+ LL  S      P  +  GVDIS +ALE+A+ N   N
Sbjct: 165 LCTGTG--CIPLLLHSLLAPAFPQLQICGVDISARALELARENLEHN 209


>gi|163749078|ref|ZP_02156328.1| hypothetical protein KT99_19594 [Shewanella benthica KT99]
 gi|161331148|gb|EDQ02037.1| hypothetical protein KT99_19594 [Shewanella benthica KT99]
          Length = 349

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP+++ R    +LD G G G +  ALLKE P  +   VDI+  AL   +     N    
Sbjct: 200 NLPKMKGR----VLDFGCGAGVITAALLKEQPKLQIECVDINAMALASCELTLTANNFIA 255

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
              T  SD     +  FD I+SNPP+
Sbjct: 256 --TTYPSDGLDQTQDKFDGIISNPPF 279


>gi|291521123|emb|CBK79416.1| Predicted O-methyltransferase [Coprococcus catus GD/7]
          Length = 244

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + + +  ++      G++I  ++ ++A  +   NG+ ++ D +  D   
Sbjct: 47  RVLDLGTGTGIIPILMAAKTDGEHFTGLEIQEESADMAARSVACNGLQQKIDIVNGD-IK 105

Query: 160 SVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
              G+     FDV+ +NPPY    + D  GL+  D    I+
Sbjct: 106 EASGIFGAASFDVVTTNPPY----MTDTHGLKNPDMPKAIA 142


>gi|239623106|ref|ZP_04666137.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47_FAA]
 gi|239522473|gb|EEQ62339.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47FAA]
          Length = 253

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + + L  ++      G++I  ++ ++A+ +   N + E+ D +  D   
Sbjct: 56  RMLDLGTGTGIIPILLTAKTEGEHFTGLEIQEESADMARRSVRYNHLEEKVDIVTGDIVE 115

Query: 160 SVE----GLFDVIVSNPPYI 175
           + +      FDV+ SNPPY+
Sbjct: 116 ASQLFALASFDVVTSNPPYM 135


>gi|170078614|ref|YP_001735252.1| hypothetical protein SYNPCC7002_A2010 [Synechococcus sp. PCC 7002]
 gi|164599156|gb|AAC14722.2| CpcM [Synechococcus sp. PCC 7002]
 gi|169886283|gb|ACA99996.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 399

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R    D +RILD G GTG     L+  +P  + VG+D+S  ALE+A+     
Sbjct: 41  AAYNFCTGRKPSTDNIRILDAGCGTGVGTEYLIHLNPAAEIVGIDLSEGALEVAEKRCQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV +R      F  L  +  + +EG FD+I
Sbjct: 101 SGVRDRHTAPVTFKRLPIEQATELEGEFDLI 131


>gi|323357971|ref|YP_004224367.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
 gi|323274342|dbj|BAJ74487.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
          Length = 504

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 12/153 (7%)

Query: 74  PRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P PE  +L     + +L R++        LD+GTG G   L L +  P  + V  DIS +
Sbjct: 135 PLPEDHVLGVGGASQTLARLQLTWRAASALDIGTGCGIQALRLRRLVP--RVVATDISER 192

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL   + NA+ N V +  +T     F  V G  F+ + SNPP++  +     G+   ++ 
Sbjct: 193 ALRFTRLNALLNDV-DGIETRHGSLFDPVAGETFERVASNPPFV--ITPRVAGVPAYEYR 249

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                DGG++G +   ++  GV  HL   G+  
Sbjct: 250 -----DGGLEGDALVASVIRGVGAHLAPGGVAQ 277


>gi|172035902|ref|YP_001802403.1| hypothetical protein cce_0986 [Cyanothece sp. ATCC 51142]
 gi|171697356|gb|ACB50337.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 401

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R    + +RILD G GTG     L+  +P  + VGVDIS KALEIA+     
Sbjct: 41  AAYNFCTGRKPATENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRIQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+        F  L  +    +EG FD+I
Sbjct: 101 SGVAANHNHPISFHHLPLEEADKIEGEFDLI 131


>gi|323490605|ref|ZP_08095810.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2]
 gi|323395697|gb|EGA88538.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2]
          Length = 200

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + + + K SP  +   VD++ +A+E+AK+NA  N +S      +SD  S+
Sbjct: 62  VLDVGCGYGPIGMTVAKISPQKQVHMVDVNTRAIELAKTNAEKNDIS-NVRIYESDGLST 120

Query: 161 VEGL-FDVIVSNPP 173
           VE   F  I++NPP
Sbjct: 121 VEASGFSAILTNPP 134


>gi|158520560|ref|YP_001528430.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
 gi|158509386|gb|ABW66353.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
          Length = 241

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DLGTG G + L L    P     G++I  +  +IA  NA  N +++R   + +D  +
Sbjct: 44  RIVDLGTGCGIIPLILACRHPSVSITGIEIQPQLAQIATENAAANQMTDRVSIVCADIRN 103

Query: 160 SVE----GLFDVIVSNPPY 174
           + +    G  D++V NPP+
Sbjct: 104 ANDHLPAGKADIVVCNPPF 122


>gi|17229505|ref|NP_486053.1| hypothetical protein all2013 [Nostoc sp. PCC 7120]
 gi|17131103|dbj|BAB73712.1| all2013 [Nostoc sp. PCC 7120]
          Length = 239

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 8/80 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156
           RILDLG GTG + L +L+  P  + + +D S + L+ A++  V +G  ER+  LQ+   D
Sbjct: 44  RILDLGCGTGELSLKILQRCPDAQVIALDYSPRMLKFAQNKIVASGYKERWTGLQADFGD 103

Query: 157 WFSSVEGL-----FDVIVSN 171
           W  + E L     FD  VS+
Sbjct: 104 WAINPETLNIGNEFDACVSS 123


>gi|148265792|ref|YP_001232498.1| methyltransferase small [Geobacter uraniireducens Rf4]
 gi|146399292|gb|ABQ27925.1| methyltransferase small [Geobacter uraniireducens Rf4]
          Length = 256

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +DLG+G G + L L +E+      GV+      ++A  N   NG+ +R   L +D  +
Sbjct: 44  RAIDLGSGCGIIPLILAREAEDVTVTGVEFQALLADLALRNVSINGLGDRISILAAD-IT 102

Query: 160 SVEGL-----FDVIVSNPPY 174
           S++G+     FD++VSNPPY
Sbjct: 103 SLKGVFPVSSFDLVVSNPPY 122


>gi|78224072|ref|YP_385819.1| putative RNA methylase:methyltransferase small [Geobacter
           metallireducens GS-15]
 gi|78195327|gb|ABB33094.1| putative RNA methylase:Methyltransferase small [Geobacter
           metallireducens GS-15]
          Length = 255

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF+ P++      R++DLGTG+  + L L + +     VGV++      +A+ N   NG+
Sbjct: 35  AFAAPQVG----ARVIDLGTGSAVIPLVLARRTVQATFVGVELQEGLATLAERNVALNGL 90

Query: 147 SERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            +R   L  D     +      FDV+VSNPPY
Sbjct: 91  VDRISILCDDVLGLRKRFPVSSFDVVVSNPPY 122


>gi|219852672|ref|YP_002467104.1| methyltransferase small [Methanosphaerula palustris E1-9c]
 gi|219546931|gb|ACL17381.1| methyltransferase small [Methanosphaerula palustris E1-9c]
          Length = 204

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 101 ILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWF 158
           ILDLG GTG + C A +  +      G+DI  +A+++A++NA   G+S  F T   SD  
Sbjct: 51  ILDLGCGTGVLTCGAAMMGA--VSVTGIDIDARAIQVAEANARRCGISATFITGDVSDQT 108

Query: 159 SSVEGLFDVIVSNPPY 174
             ++G FD ++ NPP+
Sbjct: 109 LPLDGPFDTVIMNPPF 124


>gi|50311715|ref|XP_455885.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645021|emb|CAG98593.1| KLLA0F17952p [Kluyveromyces lactis]
          Length = 222

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 9/144 (6%)

Query: 102 LDLGTGTGAVCLALLKES-PFFKGV--GVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157
           +++G+G+G V   L++   P   G+    D++  AL+        NG  +  FD LQ+D 
Sbjct: 47  IEIGSGSGIVSTFLMQNGIPNANGLYLATDLNPWALDATLDTCSKNGCKNSHFDVLQTDL 106

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCL---GLEVRDFDPR-ISLDGGIDGLSHYRTIADG 212
            SS+ E   D++V NPPY+ +  V  L      VRD +   ++LDGG DG+   + + +G
Sbjct: 107 TSSIRENEVDLLVFNPPYVPAETVPELPHSNHAVRDDEWLFLALDGGDDGMVVTQRLLNG 166

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVV 236
           + R L+ +G+  +      K + V
Sbjct: 167 LDRILSCNGVAYILFCARNKPETV 190


>gi|329936375|ref|ZP_08286140.1| methyltransferase [Streptomyces griseoaurantiacus M045]
 gi|329304171|gb|EGG48052.1| methyltransferase [Streptomyces griseoaurantiacus M045]
          Length = 220

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G   LAL+      +   VD+S +A+  A+ NA   G+  R   L+ + F+ 
Sbjct: 34  VLDVGTGSG--ALALVAARRGARVTAVDVSRRAVYAARLNAWRAGL--RIRALRGNLFTP 89

Query: 161 VEG-LFDVIVSNPPYIES 177
           V G  FD++++NPPY+ +
Sbjct: 90  VAGETFDLVLANPPYVPT 107


>gi|299144168|ref|ZP_07037248.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518653|gb|EFI42392.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 314

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 24/148 (16%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVDSALAF-------------SLPRIEKR 96
           W+ +Y+       + +  + + +E +    + +D  +AF             +L    K+
Sbjct: 115 WKKYYHPIEIGEKILIKPTWEEYENKDRIVIDIDPGMAFGTGTHETTYMCIEALEEYVKQ 174

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D + + D+G G+G + +A +K     K + VDI  K +E +  NA  N VSE+    + +
Sbjct: 175 DNI-VFDIGCGSGILGIAAIKLGAE-KVIAVDIDQKCIEASLENANMNNVSEKIKVYKGN 232

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLG 184
               V G  D+IVSN   I  +IVD +G
Sbjct: 233 LLDVVSGNADIIVSN--IIAEIIVDMIG 258


>gi|302526687|ref|ZP_07279029.1| predicted protein [Streptomyces sp. AA4]
 gi|302435582|gb|EFL07398.1| predicted protein [Streptomyces sp. AA4]
          Length = 227

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R  DLGTG+GA+ +AL +       V  DIS +AL  A  N V   +      L+    
Sbjct: 47  MRCADLGTGSGALAIALARTGATV--VAADISMRALASAWMNTVLRALP--IGLLRGGLR 102

Query: 159 SSVE-GLFDVIVSNPPYIES 177
            +VE G +DV+V+NPPY+ S
Sbjct: 103 ETVEAGPYDVVVANPPYVPS 122


>gi|326780899|ref|ZP_08240164.1| methylase [Streptomyces cf. griseus XylebKG-1]
 gi|326661232|gb|EGE46078.1| methylase [Streptomyces cf. griseus XylebKG-1]
          Length = 252

 Score = 48.5 bits (114), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+T+ L+   LA ++ R        +LDL TG+GA  LAL       +   VDIS +A+
Sbjct: 47  RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 101

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ N     +       + D   ++ G  FD +VSNPPY+ +      GL +  + P 
Sbjct: 102 ASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAP-----GLSLPRYGPG 154

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            S D G DG      I D  S  L   GL
Sbjct: 155 RSWDAGPDGRVILDRICDDASAALRPGGL 183


>gi|24379557|ref|NP_721512.1| hypothetical protein SMU.1125c [Streptococcus mutans UA159]
 gi|24377502|gb|AAN58818.1|AE014950_1 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 198

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + +AL K       + VDI+ +AL++ + NA  N VS   +  QSD + +
Sbjct: 61  LLDLGCGYGPLGIALAKVQKLDVTM-VDINNRALDLTRQNAENNEVSA--NIFQSDIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V   FD I+SNPP
Sbjct: 118 VFDSFDYIISNPP 130


>gi|169351743|ref|ZP_02868681.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
 gi|169291965|gb|EDS74098.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
          Length = 197

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G   +AL    PF +   +DI+ +AL +A+ N   N V+   +   S+ +  
Sbjct: 61  LLDVGCGYGTFGIALKSVYPFLEIDMIDINDRALNLARENLKLNNVNA--NVYLSNTYEK 118

Query: 161 VEGLFDVIVSNPP 173
           VE  +D+IV+NPP
Sbjct: 119 VENKYDLIVTNPP 131


>gi|328951766|ref|YP_004369100.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
 gi|328452090|gb|AEB07919.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
          Length = 262

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+  +++DLG G G + L L    P    VGV++      +A  N   NG   R + +QS
Sbjct: 47  REPEKVVDLGAGCGILALLLACRFPNSSFVGVELQPSLAALAVRNVRLNGFEGRIEIVQS 106

Query: 156 DWFSSVE----GLFDVIVSNPPY 174
           D  S ++      F+V+VSNPPY
Sbjct: 107 DMQSLLQLYPPSSFEVVVSNPPY 129


>gi|313245968|emb|CBY34942.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 20/154 (12%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  A   E    + + +DI  + +E+AK NA   GV +R + +  D+F  +  L
Sbjct: 200 GVGGNAIQFAFTCE----RVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKIIPSL 255

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADGVSRH 216
             DV+  +PP+     +D    +++D        GG+DGL  YR        IA  V R+
Sbjct: 256 RPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYFVPRN 308

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +   L  +  G +Q+V+V +   + K   + A+
Sbjct: 309 TDSAQLAWL-AGEDQQVEVEQNMLNYKTKTITAY 341


>gi|182440236|ref|YP_001827955.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178468752|dbj|BAG23272.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 252

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+T+ L+   LA ++ R        +LDL TG+GA  LAL       +   VDIS +A+
Sbjct: 47  RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 101

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ N     +       + D   ++ G  FD +VSNPPY+ +      GL +  + P 
Sbjct: 102 ASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAP-----GLSLPRYGPG 154

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            S D G DG      I D  S  L   GL
Sbjct: 155 RSWDAGPDGRVILDRICDDASAALRPGGL 183


>gi|240172926|ref|ZP_04751585.1| methylase, putative [Mycobacterium kansasii ATCC 12478]
          Length = 223

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 17/164 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++P+ ++ LLVD+     L  I +R   R+LDL TG+G V +A   E         DI  
Sbjct: 11  YQPQFDSRLLVDTMRRTGL--IPRR---RVLDLCTGSGFVAIAA-AEMGCASVTAFDICP 64

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            A+  ++ N    GV    D  Q  W  + +   F+VIVSNPPY+ +  VD         
Sbjct: 65  HAVRCSRDNVADAGVD--VDVRQGSWTRAFDCAPFEVIVSNPPYVPAPPVDDSDAISPAA 122

Query: 191 DPRISLDGGIDG--------LSHYRTIADGVSRHLNKDGLCSVE 226
            P  + + G DG         S  + + DG S  L +  L  V+
Sbjct: 123 GPSWAWNAGPDGRLVLDPLCKSAAKLLCDGGSLLLVQSALAGVQ 166


>gi|254489352|ref|ZP_05102555.1| Methyltransferase small domain superfamily protein [Roseobacter sp.
           GAI101]
 gi|214041859|gb|EEB82499.1| Methyltransferase small domain superfamily protein [Roseobacter sp.
           GAI101]
          Length = 229

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G GTG V     +    F+   VDI+  A+ +AK+NA+ N  ++R   L+ D F+ 
Sbjct: 70  MLDMGCGTGIVGAFAARNG--FRVTSVDINPDAVRVAKANALLNDQTDRITVLEGDLFAP 127

Query: 161 VEGL-FDVIVSNPPYIES 177
           V    FD++   PPY + 
Sbjct: 128 VTSQSFDLVCFGPPYFKG 145


>gi|261409530|ref|YP_003245771.1| methyltransferase small [Paenibacillus sp. Y412MC10]
 gi|261285993|gb|ACX67964.1| methyltransferase small [Paenibacillus sp. Y412MC10]
          Length = 201

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LD+G G G + L   + +       +DI+ +A+E+AK NA  NG+      L+SD F
Sbjct: 60  AQVLDVGCGYGPIGLTAARMASQGHVTMIDINSRAVELAKENAKRNGII-NVTILESDLF 118

Query: 159 SSVE-GLFDVIVSNPP 173
            +V+   FDV+++NPP
Sbjct: 119 EAVKDQQFDVVLTNPP 134


>gi|167622638|ref|YP_001672932.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|226712991|sp|B0TSU8|RSMC_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|167352660|gb|ABZ75273.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 341

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T+LL+++     LP++  +    +LD G G G +  ALLK  P      VDI+  AL   
Sbjct: 191 TKLLLEN-----LPKMRGK----VLDFGCGAGVIAAALLKAQPELTLECVDINAMALASC 241

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +     NG + +     SD  +   G +D I+SNPP+
Sbjct: 242 EFTLQANGFNAKI--FASDGLAQAAGRYDGIISNPPF 276


>gi|146312703|ref|YP_001177777.1| methyltransferase small [Enterobacter sp. 638]
 gi|262828272|sp|A4WDE6|TRMN6_ENT38 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|145319579|gb|ABP61726.1| methyltransferase small [Enterobacter sp. 638]
          Length = 245

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+G+G+G + L L + +     +  V++  +A   A  NA  +  +ER     +D
Sbjct: 45  VKRILDIGSGSGLLALMLAQRTEQHVTIDSVELDAQAANQASENAAESPWAERVQVQCAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W       +D+IVSNPPY E   VDC
Sbjct: 105 ILAWAPEQTARYDLIVSNPPYYEPG-VDC 132


>gi|317060713|ref|ZP_07925198.1| methyltransferase [Fusobacterium sp. D12]
 gi|313686389|gb|EFS23224.1| methyltransferase [Fusobacterium sp. D12]
          Length = 242

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 12/102 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           +DS L     +I KR    ILDLGTG  A+ L L LK +   +  G++I   + E+A  N
Sbjct: 19  LDSLLISEFIKINKRSKT-ILDLGTGNAAIPLFLSLKTTA--QIYGLEIQQISYELAIKN 75

Query: 141 AVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176
              N + E+   L  D      +FS  +  FD++VSNPP+ E
Sbjct: 76  IALNHLEEQVHILHGDMKNWECFFS--KNSFDIVVSNPPFFE 115


>gi|238927560|ref|ZP_04659320.1| methyltransferase [Selenomonas flueggei ATCC 43531]
 gi|238884485|gb|EEQ48123.1| methyltransferase [Selenomonas flueggei ATCC 43531]
          Length = 245

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 12/99 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    P +  R+ V  LDLGTGTG + L +   +     V +D   +A E+A  NA
Sbjct: 32  MDAVLLAHFPTLTGRECV--LDLGTGTGIIPLLIADRTAAVTAVELD-PVQA-ELAVRNA 87

Query: 142 VTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPY 174
             NG++E+    + D+      FS   G +D++ +NPPY
Sbjct: 88  ALNGLTEKITVREGDYRDPSALFSC--GAYDLVFANPPY 124


>gi|296108844|ref|YP_003615793.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME]
 gi|295433658|gb|ADG12829.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME]
          Length = 262

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            +  +N+ +        P P +  L   ++   L RI+ +D  ++L++GTG+G   +ALL
Sbjct: 45  LKHLFNLDMDFHESALVPTPISRYLFLDSVTKELKRIKNKDKFKMLEIGTGSG--IIALL 102

Query: 117 KESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-----DWFSSVEG-LFDVIV 169
               F +  V  ++    L++A+ N + N +SE    + S          +EG  FD+I+
Sbjct: 103 AAKIFNYNVVATEVIEDYLKLAEQNILKNSLSENIRLINSRGKIIRGIHELEGEKFDIIL 162

Query: 170 SNPPY 174
           S PP+
Sbjct: 163 SYPPF 167


>gi|146307328|ref|YP_001187793.1| methyltransferase small [Pseudomonas mendocina ymp]
 gi|145575529|gb|ABP85061.1| methyltransferase small [Pseudomonas mendocina ymp]
          Length = 322

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI D+G G G   +   +  P  + + +DI+ +AL +   NA   G+    +  +SD   
Sbjct: 140 RIADIGCGAGPGAITAAQLRPGAQVLALDINERALAMTAVNARLAGIFN-LEVSKSDLLR 198

Query: 160 SVEGLFDVIVSNPPYI 175
            V+G FD+I++NPPY+
Sbjct: 199 DVDGYFDLIIANPPYM 214


>gi|257463117|ref|ZP_05627518.1| methyltransferase [Fusobacterium sp. D12]
          Length = 250

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 12/102 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           +DS L     +I KR    ILDLGTG  A+ L L LK +   +  G++I   + E+A  N
Sbjct: 27  LDSLLISEFIKINKRSKT-ILDLGTGNAAIPLFLSLKTTA--QIYGLEIQQISYELAIKN 83

Query: 141 AVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176
              N + E+   L  D      +FS  +  FD++VSNPP+ E
Sbjct: 84  IALNHLEEQVHILHGDMKNWECFFS--KNSFDIVVSNPPFFE 123


>gi|170023426|ref|YP_001719931.1| methyltransferase small [Yersinia pseudotuberculosis YPIII]
 gi|262828924|sp|B1JRB8|TRMN6_YERPY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|169749960|gb|ACA67478.1| methyltransferase small [Yersinia pseudotuberculosis YPIII]
          Length = 252

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 13/151 (8%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 54  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113

Query: 159 SSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              E     +D+IVSNPPY    I  C   E RD            G   + T+ +   +
Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA-CRD-EARD-------TARYTGSLTHDTLLNCAEK 164

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +DG+  V + +   ++  R+   +  F+
Sbjct: 165 LITEDGMFCVVLPHELGIEFARLAGQQGWFV 195


>gi|66357544|ref|XP_625950.1| Ydr140wp-like HemK family methylase. archaeal-like.  RNA methylase
           [Cryptosporidium parvum Iowa II]
 gi|46226790|gb|EAK87756.1| Ydr140wp-like HemK family methylase. archaeal-like.  RNA methylase
           [Cryptosporidium parvum Iowa II]
          Length = 254

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 20/191 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-----ESPFFKG 124
           + +EP  E   L++ AL      I K     I ++G G+G +   LLK     ++ F   
Sbjct: 14  NVYEPS-EDSFLMEDALILEKNEILKAKPRLICEIGCGSGYLTACLLKIIKESDAEFSLP 72

Query: 125 VG--VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179
           +   VD++ KALE+++     N ++   + ++   F+ +    GLF++I+ NPPY+ S  
Sbjct: 73  ISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSSN 132

Query: 180 VDCLGLEVRDFDPRISLDGGIDGL---SHY-----RTIADGVSRHLNKDGLCSVEIGYNQ 231
            + L   + +     +  GG++GL   S++     R I    S    ++ +  +E  +N 
Sbjct: 133 KE-LNQSILNCGIDSAWSGGVNGLFFVSYFLFGDNRLILSETSHQFQEEEIIRIEDQFNS 191

Query: 232 KVDVVRIFESR 242
              +V +   +
Sbjct: 192 FPSLVDVLAPK 202


>gi|218245562|ref|YP_002370933.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|218166040|gb|ACK64777.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
          Length = 400

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   R  +RILD G GTG     L+  +P  + VG+D+S KALEIA+  +  
Sbjct: 41  AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSQK 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+ +      F  L  +  + + G FD+I
Sbjct: 101 SGVASQHNAPISFQHLNLENAAQLPGQFDLI 131


>gi|313895855|ref|ZP_07829409.1| methyltransferase small domain protein [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975280|gb|EFR40741.1| methyltransferase small domain protein [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 241

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 16/101 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR+  R+  R+LDLGTG G + L ++ E    + + V+++     +A  NA
Sbjct: 27  MDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDE--VREILAVELNSAQAALAVRNA 82

Query: 142 VTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPY 174
             NGVS +    + D+        F S    FD++ +NPPY
Sbjct: 83  ALNGVSGKITVREGDYRDPPALFVFES----FDLVFANPPY 119


>gi|312194811|ref|YP_004014872.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Frankia sp. EuI1c]
 gi|311226147|gb|ADP79002.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Frankia sp. EuI1c]
          Length = 324

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 32/192 (16%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P  VLD   RF+  + + R      +  + G   F ++ L +    F PRPETE +V  A
Sbjct: 66  PADVLD---RFW--DLVGRRAGRAPLQHLTGEAYFRHLTLAVGPGVFVPRPETEAVVGWA 120

Query: 86  L------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +      A S+P   +R     +DL  G+GA+ LAL  E    +   V+    AL   + 
Sbjct: 121 IDTLAAEASSMP--AERPGPVCVDLCAGSGAIALALADEVAGAEVHAVEADPAALTYLRR 178

Query: 140 NAVTNGVSERFDTLQS-------------------DWFSSVEGLFDVIVSNPPYIESVIV 180
           N    G   R                         D  + + G  D +VSNPPY+     
Sbjct: 179 NVAATGPPVRVHAADVLGIPTGYGPVGAWAQVPVLDGLAGLVGRVDAVVSNPPYLPDADR 238

Query: 181 DCLGLEVRDFDP 192
             +  EV   DP
Sbjct: 239 AVVEPEVGRHDP 250


>gi|269955150|ref|YP_003324939.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
 gi|269303831|gb|ACZ29381.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
          Length = 572

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 11/132 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWF 158
           R+LDLGTG G   L   + +     VG DIS +AL  A+ NA  N G ++ FD  +    
Sbjct: 220 RVLDLGTGCGIQALHAHRHAAAV--VGTDISARALAFARFNAGLNLGDADAFDLRRGSML 277

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVR----DFDPRISLDGGIDGLSHYRTIADGV 213
             V G  FD++VSNPP++ +      G  V     DF+ R   DGG  G    R +  GV
Sbjct: 278 EPVAGEQFDLVVSNPPFVITPHSGAAGRAVHDALGDFEYR---DGGRAGDDLVRDLIQGV 334

Query: 214 SRHLNKDGLCSV 225
              L   G   +
Sbjct: 335 GAVLAPGGTAQL 346


>gi|85813537|emb|CAF33043.1| putative oxidase > apramycin biosynthesisN-methyltransferase
           [Streptoalloteichus tenebrarius]
          Length = 262

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 5/76 (6%)

Query: 99  VRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VR +++G G GA VC   L+ +  F  VG D+  +ALE+A  NA  +G   R  T  SD 
Sbjct: 93  VRAVEIGCGAGAAVCTMALELAGEF--VGTDVDPEALELAAENARRHGAPVRLVT--SDL 148

Query: 158 FSSVEGLFDVIVSNPP 173
           F +++G FDVI +N P
Sbjct: 149 FDALDGRFDVIYANLP 164


>gi|330006958|ref|ZP_08305819.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS
           92-3]
 gi|328535616|gb|EGF62069.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS
           92-3]
          Length = 347

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 23/132 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG++  
Sbjct: 194 LSTLEPHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 252

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D   S+ FS V G FD+I+SNPP+                      DG    L   + +
Sbjct: 253 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 290

Query: 210 ADGVSRHLNKDG 221
             G  RHLN  G
Sbjct: 291 IRGAVRHLNSGG 302


>gi|290580442|ref|YP_003484834.1| hypothetical protein SmuNN2025_0916 [Streptococcus mutans NN2025]
 gi|254997341|dbj|BAH87942.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 198

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + +AL K       + VDI+ +AL++ + NA  N VS   +  QSD + +
Sbjct: 61  LLDLGCGYGPLGIALAKVQKLDVTM-VDINNRALDLTRQNAENNEVSA--NIFQSDIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V   FD I+SNPP
Sbjct: 118 VFDSFDYIISNPP 130


>gi|154506312|ref|ZP_02043050.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149]
 gi|153793401|gb|EDN75821.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149]
          Length = 232

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLGTGTG + + L  ++     +G++I  ++ ++A+ +   N + E+ + +Q D   
Sbjct: 48  KVLDLGTGTGILPILLSAKTRGEHFIGLEIQKESADMARRSIEWNHLQEKIEIVQGDIKE 107

Query: 160 SV----EGLFDVIVSNPPYI 175
           +        FDVIV+NPPY+
Sbjct: 108 AAALFKPTFFDVIVTNPPYM 127


>gi|315656848|ref|ZP_07909735.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492803|gb|EFU82407.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 213

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F++
Sbjct: 73  LVDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 132

Query: 161 V-EGLFDVIVSNPP 173
           +     DVI SNPP
Sbjct: 133 LGPNSVDVIWSNPP 146


>gi|261367267|ref|ZP_05980150.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile
           DSM 15176]
 gi|282570869|gb|EFB76404.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile
           DSM 15176]
          Length = 306

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 100 RILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+GTG+G + +A LK  +   +GV +D  C  +  A  NA  NGV++RF  L  D  
Sbjct: 170 RVLDIGTGSGILAIAALKLGAKVAEGVDIDPMC--VRTAGENAERNGVADRFTVLVGDLS 227

Query: 159 SSVEGLFDVIVSN 171
               G +++I +N
Sbjct: 228 DKASGQYNIITAN 240


>gi|167519989|ref|XP_001744334.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777420|gb|EDQ91037.1| predicted protein [Monosiga brevicollis MX1]
          Length = 343

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  + LVD ALA SL    + +   I+D+G GTGA+ LALL   P  +   V+    A  
Sbjct: 140 PPRQWLVDLALA-SL----ESNTRHIVDVGAGTGAIGLALLSTRPGVEVTAVEPHPTAQA 194

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVIVDCLGLEVRDFDP 192
           + + NA   G+++R   L       V   +   D+IV+N PY+ +        E+R  D 
Sbjct: 195 LIRRNAQRLGLADRLHVLCGR-LQDVALAWDQADLIVANLPYVPTTRSSTAAEEIRHED- 252

Query: 193 RISLDGGIDGLS 204
             ++  G DGL+
Sbjct: 253 EGAIYAGEDGLA 264


>gi|298346686|ref|YP_003719373.1| putative 16S rRNA methyltransferase [Mobiluncus curtisii ATCC
           43063]
 gi|298236747|gb|ADI67879.1| possible 16S rRNA methyltransferase [Mobiluncus curtisii ATCC
           43063]
          Length = 167

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F++
Sbjct: 27  LVDVGCGWGPLALTLAAECPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 86

Query: 161 V-EGLFDVIVSNPP 173
           +     DVI SNPP
Sbjct: 87  LGPNSVDVIWSNPP 100


>gi|295669049|ref|XP_002795073.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226285766|gb|EEH41332.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 534

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 15/123 (12%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           R  L   + +  +   +  ILG + F  + +        PRPETE        L+ S   
Sbjct: 153 RLRLREMVRQRARGVPLQYILGDQPFGELEILCQRGVLIPRPETESYTTRTANLLLSKFK 212

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGVGVDISCKALEIAKSNA 141
           F     +    +RILDL TGTG  C+ LL  S      P  +  GVDIS +ALE+A+ N 
Sbjct: 213 FKSESDKHPPTLRILDLCTGTG--CIPLLLHSLLAPAFPQLQICGVDISARALELARENL 270

Query: 142 VTN 144
             N
Sbjct: 271 EHN 273


>gi|304389605|ref|ZP_07371567.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304327158|gb|EFL94394.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 214

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F++
Sbjct: 73  LVDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAA 132

Query: 161 V-EGLFDVIVSNPP 173
           +     DVI SNPP
Sbjct: 133 LGPNSVDVIWSNPP 146


>gi|134094899|ref|YP_001099974.1| hypothetical protein HEAR1692 [Herminiimonas arsenicoxydans]
 gi|133738802|emb|CAL61849.1| Conserved hypothetical protein, putative SAM-dependent
           methyltransferase [Herminiimonas arsenicoxydans]
          Length = 373

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  ALL      K +  D   +AL  A+ N     + +R D +++D F    
Sbjct: 200 DIGTGTG-VIAALLAHRGVAKVIATDQDARALACARENMTRLDMRDRVDVIEADLFPP-- 256

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   + D D R+ L G ++GL+ +
Sbjct: 257 GKAALIVCNPPWLPARPNSSIEHAIYDPDSRM-LRGFLNGLAAH 299


>gi|83311262|ref|YP_421526.1| O-methyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82946103|dbj|BAE50967.1| Predicted O-methyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 255

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +PR      +D  L  +   +  R   R+LDLG G GA  L LL   P  +  G+++  
Sbjct: 20  LQPRDGYRAAIDPVLLAAA--LGARPGERVLDLGCGVGAAALCLLARCPDVEVDGLEVQE 77

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
              E+A+ NAV N V   F     D      GL  +  +++NPP+ E
Sbjct: 78  TLAELARRNAVLNAVEGCFGIHLGDAAKPPAGLGGYHHVMTNPPFFE 124


>gi|94311751|ref|YP_584961.1| methyltransferase small [Cupriavidus metallidurans CH34]
 gi|93355603|gb|ABF09692.1| methylase of polypeptide chain release factors [Cupriavidus
           metallidurans CH34]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTGTG V  ALL +    + VG D   +AL  A++N    G++   + +++D F   
Sbjct: 205 FDIGTGTG-VLAALLAQRGVKRVVGTDQDARALGNARANIERLGLTGDVEIIEADLFP-- 261

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG   ++V NPP++ +     +   V D D R+            R   +G++ HL  DG
Sbjct: 262 EGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRM-----------LRGFLNGLAAHLTPDG 310


>gi|270489799|ref|ZP_06206873.1| methyltransferase small domain protein [Yersinia pestis KIM D27]
 gi|270338303|gb|EFA49080.1| methyltransferase small domain protein [Yersinia pestis KIM D27]
          Length = 226

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 28  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 87

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    I 
Sbjct: 88  QFAENHPHQYDLIVSNPPYFAPAIA 112


>gi|251809958|ref|ZP_04824431.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875008|ref|ZP_06283883.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
 gi|251806501|gb|EES59158.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296336|gb|EFA88855.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
 gi|329734650|gb|EGG70957.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU028]
          Length = 244

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L    P   K     I D+G G G + LA+ K SP  +   +DI+ +AL +A
Sbjct: 87  SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKASPHHQITMLDINNRALALA 142

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + N   N V +    ++SD  S+V    FD I++NPP
Sbjct: 143 EMNKTKNQV-DNVTIMESDCLSAVNHQCFDYILTNPP 178


>gi|83319521|ref|YP_424011.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283407|gb|ABC01339.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 220

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +I D GT    + L L K +   K +GV+I  KA+EIA  N   NG+ ++ + + +D   
Sbjct: 23  KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVEIANENIKLNGLEDQIEIVHADIKE 81

Query: 158 FSSVEGL-FDVIVSNPPYIE 176
           FS +    FD++V NPP+ +
Sbjct: 82  FSKLHNQEFDLVVCNPPFFK 101


>gi|152973291|ref|YP_001338437.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238892958|ref|YP_002917692.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|226712958|sp|A6THY6|RSMC_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150958140|gb|ABR80170.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238545274|dbj|BAH61625.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 342

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 58/132 (43%), Gaps = 23/132 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG++  
Sbjct: 189 LSTLEPHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 247

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D   S+ FS V G FD+I+SNPP+                      DG    L   + +
Sbjct: 248 -DVFASNVFSEVNGRFDMIISNPPF---------------------HDGLQTSLEAAQAL 285

Query: 210 ADGVSRHLNKDG 221
             G  RHLN  G
Sbjct: 286 IRGAVRHLNSGG 297


>gi|311029039|ref|ZP_07707129.1| hypothetical protein Bm3-1_00509 [Bacillus sp. m3-13]
          Length = 96

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF  P +E R    ILD+G G G + L+L K  P      +D++ +A+E+AK N   N V
Sbjct: 5   AFEEPEVEGR----ILDVGCGYGPIGLSLAKFYPHRHVDMIDVNERAVELAKENGSINKV 60

Query: 147 SERFDTLQSDWFSSVEGL-FDVIVSNPP 173
            E      SD + +V    +  I+SNPP
Sbjct: 61  -ENITVFTSDIYENVTSTDYAAILSNPP 87


>gi|312115017|ref|YP_004012613.1| methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220146|gb|ADP71514.1| Methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100]
          Length = 255

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+ G G GA  L LL   P     GV+I      +A+ NA  N ++ +F    +D  +
Sbjct: 46  RVLEAGCGAGAASLCLLARVPGVSVTGVEIDAGLAALARENATENDLAAQFTIANADLTA 105

Query: 160 S-----VEGLF----DVIVSNPPYIE 176
           S       GLF    D +++NPP+ E
Sbjct: 106 SWTELEAAGLFREAYDHVIANPPFFE 131


>gi|187477318|ref|YP_785342.1| hypothetical protein BAV0813 [Bordetella avium 197N]
 gi|115421904|emb|CAJ48424.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 379

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 14/121 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I D+GTGTG V  A+L        +G D+  +AL  A+ N    G+S R    ++D F  
Sbjct: 203 IFDIGTGTG-VLAAVLARRCAQPVIGTDLDPRALACARDNLARLGLSARVSLQRADLFP- 260

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            EG   +IV NPP+I +     +   V D + R+            R    GVS HL   
Sbjct: 261 -EGKAALIVCNPPWIPAKPSSPIEYAVYDPNSRM-----------LRAYLQGVSGHLLPG 308

Query: 221 G 221
           G
Sbjct: 309 G 309


>gi|15897324|ref|NP_341929.1| hypothetical protein SSO0392 [Sulfolobus solfataricus P2]
 gi|284173336|ref|ZP_06387305.1| hypothetical protein Ssol98_01585 [Sulfolobus solfataricus 98/2]
 gi|13813541|gb|AAK40719.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601999|gb|ACX91602.1| methyltransferase small [Sulfolobus solfataricus 98/2]
          Length = 186

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + L  ++P  K   VD++  A+++AK NA  NGV  R   ++SD F +
Sbjct: 49  VADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAKLNGVENRTIIVKSDIFDN 108

Query: 161 --VEGLFDVIVSNPP 173
             ++  F  I SNPP
Sbjct: 109 IPIDVKFTAIYSNPP 123


>gi|42560604|ref|NP_975055.1| methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492100|emb|CAE76697.1| Methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301320502|gb|ADK69145.1| methyltransferase small domain protein [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 240

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +I D GT    + L L K +   K +GV+I  KA+EIA  N   NG+ ++ + + +D   
Sbjct: 43  KICDFGTNNAVIPLILSKYTRA-KIIGVEIQNKAVEIANENIKLNGLEDQIEIIHADIKE 101

Query: 158 FSSVEGL-FDVIVSNPPYIE 176
           FS +    FD++V NPP+ +
Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121


>gi|325138357|gb|EGC60926.1| methyltransferase domain protein [Neisseria meningitidis ES14902]
 gi|325202074|gb|ADY97528.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240149]
          Length = 331

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|294789277|ref|ZP_06754515.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453]
 gi|294482702|gb|EFG30391.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G + + LL +    K +  D + +A++ A +N    G   + D LQ D+F S 
Sbjct: 193 FDIGTGSGILAI-LLAQRGVCKILATDNNPRAVQCAHANVARLGFDLQIDVLQQDYFPS- 250

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            GL ++IV NPP++ +       +E   +DP  ++
Sbjct: 251 -GLANLIVCNPPWLPAKPTS--AIETALYDPNHTM 282


>gi|189461316|ref|ZP_03010101.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136]
 gi|189431845|gb|EDV00830.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136]
          Length = 236

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 13/131 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG + L + + S     VG DI  +A+E A  N   +    R    + D   
Sbjct: 40  RVLDIGTGTGLIALMVAQRSAACV-VGTDIDGEAVEQAMENVNASPWKNRICICRKDVMQ 98

Query: 160 ---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                 G FDVIVSNPPY           EVR  D R         L+ +  +   V + 
Sbjct: 99  MNGEEYGSFDVIVSNPPYFVE--------EVRCPDERRDTARHTGNLT-FGNLLTAVEKL 149

Query: 217 LNKDGLCSVEI 227
           L +DG+ SV I
Sbjct: 150 LTEDGVFSVII 160


>gi|26553518|ref|NP_757452.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma
           penetrans HF-2]
 gi|26453524|dbj|BAC43856.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma
           penetrans HF-2]
          Length = 290

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 17/208 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTG--AVCLAL 115
           FY +   +    F PR ETE ++D A+       +K+  D   ILDL +G+G  A  ++ 
Sbjct: 89  FYGLSFFIKKGCFVPRQETEYMLDWAVK------QKKLIDKKYILDLCSGSGVLANTISY 142

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNP 172
           +K++     +GV+ +    ++   N     +  +F  ++SD F      +   D I+ NP
Sbjct: 143 IKKNKDAIVIGVEKNRTPYKVGVKNQRNLKLKTQF--IKSDIFKIDRSHYEKCDFIICNP 200

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+    D         +P+ +L    +G   Y      +   L        EIG+NQK
Sbjct: 201 PYIDKN--DPNVDPSTKCEPKQALFAPQNGYYFYFRFLSEIYPILANGTEIIFEIGFNQK 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            ++ +      + +    KD    DRVL
Sbjct: 259 EEIEKFLIKNNITVFKFLKDLDDKDRVL 286


>gi|325140538|gb|EGC63059.1| methyltransferase domain protein [Neisseria meningitidis CU385]
 gi|325200137|gb|ADY95592.1| Methyltransferase small domain protein [Neisseria meningitidis
           H44/76]
          Length = 310

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 136 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 192

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 193 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 241


>gi|312069466|ref|XP_003137695.1| methylase [Loa loa]
 gi|307767142|gb|EFO26376.1| methylase [Loa loa]
          Length = 210

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 12/125 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALL 116
            Y +        +EP  +T LL+D AL      +E+ +   ++++G+G+G V   C  LL
Sbjct: 6   LYRITDEQKESVYEPAEDTFLLLD-ALEEDKEALEQLEPNVVVEIGSGSGIVSVFCQQLL 64

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172
           +  P F  +  D++ KAL+  ++ A  N VS   + +Q D  S++     GL DV++ NP
Sbjct: 65  R-VPVFT-LTTDMNFKALQCTRTTAQLNNVS--VEAVQCDLLSALNHRLCGLVDVLLFNP 120

Query: 173 PYIES 177
           PY+ +
Sbjct: 121 PYVPT 125


>gi|161870075|ref|YP_001599245.1| hypothetical protein NMCC_1113 [Neisseria meningitidis 053442]
 gi|161595628|gb|ABX73288.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 306

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237


>gi|254805011|ref|YP_003083232.1| hypothetical protein NMO_1044 [Neisseria meningitidis alpha14]
 gi|254668553|emb|CBA06012.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 367

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFVDLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|15677104|ref|NP_274256.1| hypothetical protein NMB1232 [Neisseria meningitidis MC58]
 gi|7226471|gb|AAF41613.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316985091|gb|EFV64044.1| methyltransferase small domain protein [Neisseria meningitidis
           H44/76]
          Length = 306

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237


>gi|324990377|gb|EGC22315.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus sanguinis SK353]
          Length = 538

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 22/150 (14%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKSNAVTNGVS 147
           E  D  R+ D   G+G++ L + KE P  K        G +++     +A+ N + +GV+
Sbjct: 212 ENDDQFRVYDPTMGSGSLLLTVQKELPEGKREGSVAFYGQELNTTTYNLARMNLMMHGVN 271

Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                 +R DTL +DW F+  +G+     FD +V+NPPY +   +  +    R  D R  
Sbjct: 272 YRNMNLKRGDTLDTDWPFAEKDGIQLPLKFDAVVANPPYSQKWEIKSID---RSKDSRFK 328

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + Y  I  G+  HL   G  ++
Sbjct: 329 FGVAPASKADYAFILHGL-YHLESTGTMAI 357


>gi|262375965|ref|ZP_06069196.1| predicted protein [Acinetobacter lwoffii SH145]
 gi|262309059|gb|EEY90191.1| predicted protein [Acinetobacter lwoffii SH145]
          Length = 317

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 27/158 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDT 152
           + R   R++++  GT A  +++ +  P    + V D++ KAL  ++ N    G++     
Sbjct: 131 QPRPFKRVVEMCCGTSAAAISIARHFPAVNEMMVADLNPKALLYSQINISFAGLN-HIHP 189

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG--IDG--LSHYRT 208
           +QS+ FS+++G FD+I +NPPY+             D + R    GG  +DG  LS +R 
Sbjct: 190 VQSNLFSNLDGKFDLIFANPPYL------------IDPEQRQYRHGGNALDGCDLS-FRI 236

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           I +G+ R LN  G   +  G       V + E   LFL
Sbjct: 237 IKEGLQR-LNSGGHLFLYTG-------VTVTEHGNLFL 266


>gi|297566408|ref|YP_003685380.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946]
 gi|296850857|gb|ADH63872.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946]
          Length = 253

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 21/110 (19%)

Query: 76  PETELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGAVCLALLKESPFFK 123
           PE  +L++  +AF     E             +  +R+LDLGTG+G + +A      +  
Sbjct: 87  PEQRILLEPGMAFGTGHHETTRMALEALAERVKPGMRVLDLGTGSGILAIAAQMLGAW-- 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171
            VGVD     +  A+ NA  NGVS  F   TL+     +  G+FD+IV+N
Sbjct: 145 AVGVDNDPAVIPQARHNAAANGVSPEFFLGTLE-----NAHGVFDLIVAN 189


>gi|117618463|ref|YP_858125.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|262827849|sp|A0KPC4|TRMN6_AERHH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|117559870|gb|ABK36818.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 236

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G+G+G + L L + SP    +  V++   A   A+ NA  +   ER   ++S   
Sbjct: 41  RVLDIGSGSGLIALMLAQRSPADCRIDAVELDSNAARQARENAAASPWHERVTVIESAIQ 100

Query: 159 SSVEGLFDVIVSNPPY 174
           +     +D+IVSNPPY
Sbjct: 101 TYQATPYDLIVSNPPY 116


>gi|319948430|ref|ZP_08022568.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4]
 gi|319437912|gb|EFV92894.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4]
          Length = 474

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG G   +  L  +      G DI+ + LE+A +    N +  R + L+  WF  
Sbjct: 105 VLDVGTGCGVQMVHALGTA--DSATGTDITPRCLELAAATLAINDL--RAELLRGSWFEP 160

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V G  FD IV+NPP++  V     G   R+    ++LDG        RT+  G   HL  
Sbjct: 161 VAGRRFDRIVANPPFV--VGPPETGHSYRESG--LALDGA------SRTVVSGAPEHLAD 210

Query: 220 DGLCSVEIGYNQKVD 234
            G   +   + ++ D
Sbjct: 211 GGTAVMLASWVERED 225


>gi|261392506|emb|CAX50057.1| putative methyltransferase [Neisseria meningitidis 8013]
          Length = 306

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 132 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 188

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 189 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 237


>gi|229542213|ref|ZP_04431273.1| methyltransferase small [Bacillus coagulans 36D1]
 gi|229326633|gb|EEN92308.1| methyltransferase small [Bacillus coagulans 36D1]
          Length = 200

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + LAL    P      VDI+ +A+E+A+ NA  N +S      +S+ F +
Sbjct: 62  VLDMGCGYGPIGLALATSFPGRHVHMVDINTRAVELAEKNAARNHIS-NVSIYESNLFEN 120

Query: 161 VE-GLFDVIVSNPP 173
           V+ G F +I +NPP
Sbjct: 121 VKSGPFALIATNPP 134


>gi|242308816|ref|ZP_04807971.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489]
 gi|239524649|gb|EEQ64515.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489]
          Length = 202

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 17/205 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     +S  T  PRPETE+L+D A    L     +++  I         +   LL++ 
Sbjct: 3   FYGEEFYISHGTLIPRPETEILIDKAKEIILQH-SCKNIAEIGIGSGIISIMLSLLLQDY 61

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           P  K    DIS ++L  A  N     +S  + + +   D+ +  +  FD+++SNPPYI++
Sbjct: 62  P-LKFYASDISPESLFNAYVNLKKFKISNLKLYKSAFLDFNTQNKLSFDLLISNPPYIKN 120

Query: 178 VIVDCLGLEVRDFDPRISLDGGI--DGLSHYRTIADGVSR--HLNKDGLCSVEIGYNQKV 233
              D +      ++P  +L GG   D + H   +    ++  HL    +C  E+GYNQ+ 
Sbjct: 121 ---DEILPHSLSYEPSKALFGGEVGDEILHQIILLAYNAKIPHL----IC--EMGYNQRQ 171

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
            +           +  +KD    DR
Sbjct: 172 SIENFIHKIPHKKIEFYKDLANLDR 196


>gi|227495176|ref|ZP_03925492.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
           15436]
 gi|226831628|gb|EEH64011.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
           15436]
          Length = 218

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
           R LD+G G G +   L K SP  K   VD++ +AL++ K NA  NG +  E +   ++  
Sbjct: 77  RFLDVGCGWGVISTLLGKFSPDAKIWAVDVNGRALDLTKRNANANGCTNVETYYAHEALE 136

Query: 158 FSSVEGL-FDVIVSNPPY------IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI- 209
            +  EGL FD+I SNPP          +++D L L           D G+  L   + + 
Sbjct: 137 KARAEGLQFDLIWSNPPIRVGKAETHQILLDWLSLLA---------DEGVAWLIVAKNLG 187

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           AD ++  LN  G  + +    +   ++R+
Sbjct: 188 ADSLTTWLNDQGFQAEKAASKKGFRLLRV 216


>gi|170783110|ref|YP_001711444.1| putative methyl transferase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157680|emb|CAQ02881.1| putative methyl transferase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 418

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG GTG +  A+    P  + +  D S  A++ A++    NGV+E    ++ D  S+V
Sbjct: 275 VDLGCGTGVIASAVALARPGIRVIATDQSWAAVDSARATVAANGVAEWVTVVRDDAGSTV 334

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +G  D+++ NPP+     V   GL  R F
Sbjct: 335 PDGSADLVLLNPPFHTGATVHA-GLAPRLF 363


>gi|56697367|ref|YP_167735.1| hypothetical protein SPO2520 [Ruegeria pomeroyi DSS-3]
 gi|56679104|gb|AAV95770.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 403

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 27/150 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA+L        + VD S  AL +A+  A+ +G++ RF+T Q D F
Sbjct: 231 TRVLDVFSHVGGFALAMLAGGAG-SALAVDGSAPALALAEQGALASGLAGRFETRQGDAF 289

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIAD 211
             +  L      FDV++ +PP                F P + +LD G+        +A 
Sbjct: 290 DVLTALAEEGETFDVVICDPPA---------------FAPSKQALDAGLRAYERVARLAA 334

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            + R     GLCS     +   D+ R  E+
Sbjct: 335 ALVRPGGYLGLCSC----SHAADLSRFREA 360


>gi|325134521|gb|EGC57166.1| methyltransferase domain protein [Neisseria meningitidis M13399]
          Length = 331

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|108808437|ref|YP_652353.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua]
 gi|108811360|ref|YP_647127.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516]
 gi|145598846|ref|YP_001162922.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F]
 gi|153950132|ref|YP_001400108.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162420057|ref|YP_001607926.1| hypothetical protein YpAngola_A3602 [Yersinia pestis Angola]
 gi|165925329|ref|ZP_02221161.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937024|ref|ZP_02225589.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008289|ref|ZP_02229187.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166212275|ref|ZP_02238310.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167398816|ref|ZP_02304340.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421141|ref|ZP_02312894.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167470538|ref|ZP_02335242.1| hypothetical protein YpesF_22287 [Yersinia pestis FV-1]
 gi|294504500|ref|YP_003568562.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003]
 gi|123072696|sp|Q1C564|TRMN6_YERPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|123373349|sp|Q1CKF3|TRMN6_YERPN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828868|sp|A7FFT0|TRMN6_YERP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828901|sp|A9R3Z3|TRMN6_YERPG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828911|sp|A4TKY7|TRMN6_YERPP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|108775008|gb|ABG17527.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516]
 gi|108780350|gb|ABG14408.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua]
 gi|145210542|gb|ABP39949.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F]
 gi|152961627|gb|ABS49088.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162352872|gb|ABX86820.1| methyltransferase family protein [Yersinia pestis Angola]
 gi|165914887|gb|EDR33499.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922936|gb|EDR40087.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992671|gb|EDR44972.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206206|gb|EDR50686.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960630|gb|EDR56651.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051320|gb|EDR62728.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|262362508|gb|ACY59229.1| hypothetical protein YPD4_2322 [Yersinia pestis D106004]
 gi|262366487|gb|ACY63044.1| hypothetical protein YPD8_2369 [Yersinia pestis D182038]
 gi|294354959|gb|ADE65300.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003]
          Length = 248

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 50  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 109

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    I 
Sbjct: 110 QFAENHPHQYDLIVSNPPYFAPAIA 134


>gi|167423200|ref|ZP_02314953.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167057370|gb|EDR67116.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
          Length = 248

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 50  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 109

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    I 
Sbjct: 110 QFAENHPHQYDLIVSNPPYFAPAIA 134


>gi|325128362|gb|EGC51246.1| methyltransferase domain protein [Neisseria meningitidis N1568]
          Length = 331

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|269959613|ref|ZP_06173994.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835671|gb|EEZ89749.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 239

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           +ILD+GTGTG + L   +  P  +   +DI   A+E A+ N   +  S+R     +D   
Sbjct: 45  KILDIGTGTGLLALMCAQRFPNAQITALDIEISAIEAAQKNFTQSPWSDRLWVRHTDVLQ 104

Query: 158 FSSVEGLFDVIVSNPPYIES 177
           F S E  F+ I+ NPPY  S
Sbjct: 105 FES-EQRFEHIICNPPYFNS 123


>gi|254453056|ref|ZP_05066493.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238]
 gi|198267462|gb|EDY91732.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238]
          Length = 404

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  ALE+AK+ A   GV++RF+T Q D F  +E L      FDV+V +PP
Sbjct: 259 VDGSAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPP 311


>gi|113461439|ref|YP_719508.1| SAM-dependent methyltransferase [Haemophilus somnus 129PT]
 gi|123031428|sp|Q0I4T7|TRMN6_HAES1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|112823482|gb|ABI25571.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 236

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           +LDLGTGTG + L L + SP    +  V++  +A   AK N   +  + +    Q D   
Sbjct: 42  LLDLGTGTGLIALMLAQRSPEHCHISAVELDPQAYLQAKDNIQQSPWANKIKIFQQDIIV 101

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    E  FDVI +NPPY +  I DC
Sbjct: 102 FAQDCEHKFDVITANPPYFKQGI-DC 126


>gi|257452715|ref|ZP_05618014.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059256|ref|ZP_07923741.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684932|gb|EFS21767.1| methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 242

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 8/100 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           +DS L     +I K+   +ILDLGTG  A+ L L LK +   +  G++I   + ++A  N
Sbjct: 27  LDSLLISEFVKINKQSK-KILDLGTGNAAIPLFLSLKTTG--QIYGLEIQKVSYDLAIKN 83

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
            V N + E+   L  D  +  E      FD++VSNPP+ E
Sbjct: 84  IVLNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFE 123


>gi|318058889|ref|ZP_07977612.1| hypothetical protein SSA3_13145 [Streptomyces sp. SA3_actG]
          Length = 213

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+GA  LALL      +    D+S +A+  A+ NA   G  +R   L+ D    
Sbjct: 26  VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 81

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           V G  FD++VSNPPY+            R     ++ D G  G    R + D V  H
Sbjct: 82  VRGQRFDLVVSNPPYVPDPAARTGPRRGRSHAASLAWDAGPGG----RHLVDRVCAH 134


>gi|302544276|ref|ZP_07296618.1| putative transferase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461894|gb|EFL24987.1| putative transferase [Streptomyces himastatinicus ATCC 53653]
          Length = 483

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 11/135 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R LDLGTG+G   L   + +   +    D + +AL++A+     +G  E  D  +   
Sbjct: 136 VKRALDLGTGSGIQALHASRHA--ARVTATDPNPRALDMARLTLALSGAPEP-DLREGSL 192

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V G  +D+IVSNPP++       +     + D  +  DGG+ G    RT+    + H
Sbjct: 193 FEPVGGETYDLIVSNPPFV-------ISPRSAEGDRLVYRDGGMSGDDLCRTLVQQSAAH 245

Query: 217 LNKDGLCSVEIGYNQ 231
           L   G C +   +  
Sbjct: 246 LADGGWCQLLANWQH 260


>gi|289679660|ref|ZP_06500550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae FF5]
          Length = 91

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++
Sbjct: 17  ADLSYDALEVANQNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDA 68


>gi|218768234|ref|YP_002342746.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491]
 gi|121052242|emb|CAM08567.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491]
 gi|325142497|gb|EGC64901.1| methyltransferase domain protein [Neisseria meningitidis 961-5945]
 gi|325198365|gb|ADY93821.1| methyltransferase domain protein [Neisseria meningitidis G2136]
          Length = 331

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|317125286|ref|YP_004099398.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM
           43043]
 gi|315589374|gb|ADU48671.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM
           43043]
          Length = 204

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 13/147 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + L L + SP  +  GVD++ +AL++A  NA   GV        +D    
Sbjct: 65  LLDLGCGWGPISLTLARRSPAARVWGVDVNRRALQLAALNAEAAGVDNVTFCEPAD---- 120

Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           V G   FD I SNPP    V    L   +  + PR++ +G    +      +D + R +N
Sbjct: 121 VPGDLRFDTIWSNPPI--HVGKSALHALLERWLPRLAPEGVAHLVVQKHLGSDSLQRWIN 178

Query: 219 KD--GLCSVEIGYNQKVDVVRIFESRK 243
               GL    +   +     RI E R+
Sbjct: 179 AQDWGLTCTRLSSTK---AFRILEVRR 202


>gi|251791015|ref|YP_003005736.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya zeae Ech1591]
 gi|247539636|gb|ACT08257.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya zeae Ech1591]
          Length = 342

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LDL  G G +  +  + SP  +    D+   ALE +++    N +  +
Sbjct: 189 LSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAALEASRATLAANELEGQ 248

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDG 198
              + S+ +S ++G FD+I+SNPP+ + +       E  +R     ++++G
Sbjct: 249 --VIASNVYSDIQGRFDLIISNPPFHDGMQTSLHAAEMMIRGAAAHLNMEG 297


>gi|261345449|ref|ZP_05973093.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541]
 gi|282566496|gb|EFB72031.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541]
          Length = 244

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R LD+G+G+G + L L + +       V++   A   A+ N   +  +ER   +  D 
Sbjct: 45  VQRALDIGSGSGLIALMLAQRNAHLNIDAVELDSDAAAQAQQNFDESPWAERLQIVNQDI 104

Query: 158 FSSVEGL---FDVIVSNPPYIESVI 179
            S  E     +DVIVSNPPY E  I
Sbjct: 105 ISFSEQTTKQYDVIVSNPPYFEPAI 129


>gi|330466469|ref|YP_004404212.1| methyltransferase small [Verrucosispora maris AB-18-032]
 gi|328809440|gb|AEB43612.1| methyltransferase small [Verrucosispora maris AB-18-032]
          Length = 494

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L L   +   +    D+S +AL  A + A  NG  + ++ L+
Sbjct: 153 RRPVETALDLGTGSGVQALHLSTHA--RQVTATDVSRRALRFAATTAALNG--QDWELLR 208

Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175
            D  + V G  FD++VSNPP++
Sbjct: 209 GDMVAPVAGRRFDLVVSNPPFV 230


>gi|22125188|ref|NP_668611.1| hypothetical protein y1288 [Yersinia pestis KIM 10]
 gi|21958052|gb|AAM84862.1|AE013731_7 putative enzyme [Yersinia pestis KIM 10]
          Length = 252

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 54  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    I 
Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA 138


>gi|84490323|ref|YP_448555.1| hypothetical protein Msp_1545 [Methanosphaera stadtmanae DSM 3091]
 gi|84373642|gb|ABC57912.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 197

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N++     + + P  +T LL+D+ +         ++   +L++G G G V +A    +
Sbjct: 3   YENIKYNECDEVYPPAEDTFLLIDNLIV--------KNNDSVLEVGCGCGIVSIAASLNA 54

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              K   +DI+  A++  K N   N   +  + ++S+ F  ++  +D+I+ N PY+    
Sbjct: 55  E--KVTSIDINPHAIKCTKENIKLNN-RKNIEVIESNLFEKIDDKYDLILFNTPYLP--- 108

Query: 180 VDCLGLEVRDFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDG 221
              +  E  D D   S   DGG+DG        +   ++L +DG
Sbjct: 109 ---VTEEEHDVDDDYSKAWDGGVDGRKVIDAFLEEAPKYLKEDG 149


>gi|54024505|ref|YP_118747.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
 gi|54016013|dbj|BAD57383.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
          Length = 385

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GTGTG V  A+L +         D++ +A+  A+SN    G+ +R    ++D + +
Sbjct: 206 VFDIGTGTG-VLAAVLAQRGAADVRATDLNPRAVRCARSNLRRLGLDDRVHVAEADLWPA 264

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRT 208
           V    D+IV NPP++       L L V  +DP  + LD  + GL+ + T
Sbjct: 265 VPAHADLIVCNPPWLPGHPTSALELGV--YDPGSAVLDRFLTGLADHLT 311


>gi|313906141|ref|ZP_07839490.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
 gi|313469028|gb|EFR64381.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
          Length = 246

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +++K +    LDLGTGTG + + L  ++      G++I   + E+A  + 
Sbjct: 31  IDAVLLSGFAKVKKGE--NALDLGTGTGIIPILLAAKTEGRSFTGLEIQHSSAEMAARSI 88

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
             N + +R   ++ D   +        FDV+VSNPPY+
Sbjct: 89  AVNHLEDRISIVEGDIKEAASLFGPASFDVVVSNPPYM 126


>gi|254437351|ref|ZP_05050845.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus
           307]
 gi|198252797|gb|EDY77111.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus
           307]
          Length = 404

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  ALE+AK+ A   GV++RF+T Q D F  +E L      FDV+V +PP
Sbjct: 259 VDGSAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPP 311


>gi|45442295|ref|NP_993834.1| hypothetical protein YP_2513 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597215|ref|YP_071406.1| hypothetical protein YPTB2899 [Yersinia pseudotuberculosis IP
           32953]
 gi|149365399|ref|ZP_01887434.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125]
 gi|186896312|ref|YP_001873424.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+]
 gi|218929781|ref|YP_002347656.1| hypothetical protein YPO2709 [Yersinia pestis CO92]
 gi|229838272|ref|ZP_04458431.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895532|ref|ZP_04510703.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides A]
 gi|229898836|ref|ZP_04513981.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229901610|ref|ZP_04516732.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|81638822|sp|Q667U2|TRMN6_YERPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|123776977|sp|Q74SR9|TRMN6_YERPE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828876|sp|B2KA56|TRMN6_YERPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|45437159|gb|AAS62711.1| SAM-dependent methyltransferases [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51590497|emb|CAH22137.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115348392|emb|CAL21328.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149291812|gb|EDM41886.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125]
 gi|186699338|gb|ACC89967.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+]
 gi|229681539|gb|EEO77633.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|229688384|gb|EEO80455.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694638|gb|EEO84685.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701338|gb|EEO89366.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides A]
 gi|320016082|gb|ADV99653.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 252

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER    Q D  
Sbjct: 54  RVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERIHIHQQDIH 113

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    I 
Sbjct: 114 QFAENHPHQYDLIVSNPPYFAPAIA 138


>gi|227496765|ref|ZP_03927038.1| methyltransferase [Actinomyces urogenitalis DSM 15434]
 gi|226833718|gb|EEH66101.1| methyltransferase [Actinomyces urogenitalis DSM 15434]
          Length = 425

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALA-----FSLPRIEKRDVVRI-LDLGTGTGAV 111
           +D  ++R  ++SD  E      L  D  L       +L  +  R  VR  LDLG G G  
Sbjct: 29  QDGADLRWWVASDLGELETGRALEPDHVLGIGGAGLTLASLTPRQPVRTALDLGCGCGIQ 88

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FDVIV 169
            L LL+ +     V  DIS +AL     NA   G   ER + +Q  +   V G  FD+I 
Sbjct: 89  TLYLLQHAEHV--VATDISTRALAFTAFNAALAGADPERLELVQGSFLEPVAGRRFDLIA 146

Query: 170 SNPPYI 175
           +NPP++
Sbjct: 147 TNPPFV 152


>gi|297195650|ref|ZP_06913048.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719008|gb|EDY62916.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 245

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LDLG G G   L  L   P  KG GVD+S  AL  A+  A+  GV ER    + D   
Sbjct: 39  RVLDLGCGGGEWLLRALAAQPALKGEGVDVSEDALSRAREAAIKRGVHERLTLHRHDAAD 98

Query: 158 FSSVEGLFDVIVSN 171
           F S    FD+++S+
Sbjct: 99  FDSPHA-FDLVISS 111


>gi|121634925|ref|YP_975170.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18]
 gi|120866631|emb|CAM10382.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18]
          Length = 331

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 157 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 213

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 214 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 262


>gi|160900635|ref|YP_001566217.1| methyltransferase small [Delftia acidovorans SPH-1]
 gi|160366219|gb|ABX37832.1| methyltransferase small [Delftia acidovorans SPH-1]
          Length = 403

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GTGTG V  ALL      + V  D+S +AL  A+ N    G+++R    ++D F  
Sbjct: 228 VWDIGTGTG-VLSALLLHRGVRQVVATDLSDRALACAQDNLQRLGLAQRVSLRKADLFP- 285

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            EG   ++V NPP++       L   V D   R+ L G ++GL+ +
Sbjct: 286 -EGRAALVVCNPPWLPGKASSLLEQAVYDEGSRM-LRGFVEGLAAH 329


>gi|325132584|gb|EGC55277.1| methyltransferase domain protein [Neisseria meningitidis M6190]
 gi|325208172|gb|ADZ03624.1| methyltransferase domain protein [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|322515350|ref|ZP_08068346.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
           25976]
 gi|322118637|gb|EFX90859.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
           25976]
          Length = 329

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KILDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +E  FD+IVSNPP+ + +
Sbjct: 250 HIEERFDLIVSNPPFHDGI 268


>gi|16126353|ref|NP_420917.1| hypothetical protein CC_2114 [Caulobacter crescentus CB15]
 gi|221235136|ref|YP_002517572.1| methyltransferase [Caulobacter crescentus NA1000]
 gi|13423601|gb|AAK24085.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220964308|gb|ACL95664.1| methyltransferase [Caulobacter crescentus NA1000]
          Length = 247

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 20/130 (15%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R+LG R    VRL  + D + P  +  LL  +A   +LP        R+L+ G G G   
Sbjct: 10  RVLGGR----VRLRQAPDGYRPGMDAALL--AATCDALPG------QRVLEPGCGVGGAL 57

Query: 113 LALLKESP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FD 166
           LA     P   F+GV  D +  +L  A  N   NG++ R    Q D  +    L    FD
Sbjct: 58  LAAATRRPEAIFQGVERDETAASL--AAENVALNGLTSRVAIAQGDVEAGFRALGLPVFD 115

Query: 167 VIVSNPPYIE 176
            +++NPPY +
Sbjct: 116 AVMANPPYFD 125


>gi|269986472|gb|EEZ92757.1| methylase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 196

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 20/126 (15%)

Query: 101 ILDLGTGTGAVCLA---LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LD+  G+G + L    L    PF     VDI+ KA++  + NA  NG+S  F+ + SD 
Sbjct: 31  VLDMCAGSGIIGLNAARLANTVPF-----VDINPKAIKAIEYNARKNGISN-FECINSDL 84

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F +++   FD+I +NPPY+   +    +G          +L GG  G      I   +++
Sbjct: 85  FYALDKRKFDIIYANPPYLPKKMEKGWIGY---------ALSGGETGNEITLKIISSLTK 135

Query: 216 HLNKDG 221
           HL ++G
Sbjct: 136 HLKRNG 141


>gi|307264716|ref|ZP_07546296.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870028|gb|EFN01792.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 231

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 94  KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDGT--VVASDVFS 151

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 152 NIEERFDLIVSNPPFHDGI 170


>gi|165977451|ref|YP_001653044.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|226712984|sp|B0BU33|RSMC_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|165877552|gb|ABY70600.1| putative ribosomal RNA small subunit methyltransferase C
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 329

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENALDGT--VVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 250 NIEERFDLIVSNPPFHDGI 268


>gi|304437471|ref|ZP_07397429.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369521|gb|EFM23188.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 245

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    P +  R+  R+LDLGTG G + L +   +       +D   +A E+A  NA
Sbjct: 32  MDAVLLAHFPTLTGRE--RVLDLGTGMGIIPLLIADHAAIVTAAEID-PVQA-ELAARNA 87

Query: 142 VTNGVSERFDTLQSDW-----FSSVEGLFDVIVSNPPY 174
             NG++E+    + D+       S E  +D++ +NPPY
Sbjct: 88  ALNGLTEKITVREGDYRDPAALFSYEA-YDIVFANPPY 124


>gi|270659705|ref|ZP_06222366.1| putative adenine-specific methylase [Haemophilus influenzae HK1212]
 gi|270316958|gb|EFA28641.1| putative adenine-specific methylase [Haemophilus influenzae HK1212]
          Length = 120

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILDL TG+G + +A     P  +   +D+S  AL +A+ N   + +  R   +QS+ F 
Sbjct: 46  HILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFE 105

Query: 160 SVEGL-FDVIVSNPP 173
           ++ G  +D+IV+NPP
Sbjct: 106 NILGQKYDLIVTNPP 120


>gi|257058606|ref|YP_003136494.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|256588772|gb|ACU99658.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 400

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   R  +RILD G GTG     L+  +P  + VG+D+S KALEIA+  +  
Sbjct: 41  AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSHK 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +GV+ +      F  L  +  + + G FD+I
Sbjct: 101 SGVASQHNAPISFHHLNLENAAQLPGQFDLI 131


>gi|190151361|ref|YP_001969886.1| ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|226712983|sp|B3GZF1|RSMC_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|189916492|gb|ACE62744.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 329

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 250 NIEERFDLIVSNPPFHDGI 268


>gi|168703374|ref|ZP_02735651.1| methyltransferase small [Gemmata obscuriglobus UQM 2246]
          Length = 348

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 15/82 (18%)

Query: 101 ILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDT 152
           +LDLG G GAV CLA     P  +   +D S +A+ +A+ NA  NGV+        R   
Sbjct: 211 VLDLGCGNGAVGCLAGAMAGPDARVTFIDSSLRAIALAELNAKANGVTNTRFVNATRLQG 270

Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174
           L+ D        FDVI++NPPY
Sbjct: 271 LEEDK-------FDVILANPPY 285


>gi|325144624|gb|EGC66923.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240013]
 gi|325205992|gb|ADZ01445.1| methyltransferase domain protein [Neisseria meningitidis
           M04-240196]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|254670082|emb|CBA04974.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|254428746|ref|ZP_05042453.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
 gi|196194915|gb|EDX89874.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
          Length = 324

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 4/75 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G + + L ++   ++  GVD+S  A+  +  +   NG+  R   +  D FS
Sbjct: 189 KVIDMGCGAGVISVWLARQG--WQVQGVDVSASAVAASTDSLARNGLQGRI--MGGDLFS 244

Query: 160 SVEGLFDVIVSNPPY 174
            ++G  D++V+NPP+
Sbjct: 245 PIQGRVDMVVTNPPF 259


>gi|284029089|ref|YP_003379020.1| methylase [Kribbella flavida DSM 17836]
 gi|283808382|gb|ADB30221.1| methylase [Kribbella flavida DSM 17836]
          Length = 216

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LD+ TG+G   LAL           +D+S +AL   + NA+ +G+  R  TL+   F 
Sbjct: 33  RALDVCTGSG--VLALTAAQCGATTTAIDVSRRALLTVRLNALRHGL--RVRTLRGQTFG 88

Query: 160 SVEG-LFDVIVSNPPYIESVIVD 181
            V G  FD+IVSNPPY+ S   D
Sbjct: 89  PVAGERFDLIVSNPPYVPSPRAD 111


>gi|15673425|ref|NP_267599.1| hypothetical protein L65498 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724433|gb|AAK05541.1|AE006374_6 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406920|gb|ADZ63991.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. lactis CV56]
          Length = 200

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSE 148
           L   +      +LD+G G G + L L K+  F  GV  VD++ +AL++ + NA+ N VS 
Sbjct: 52  LENYQPESAKSLLDVGCGYGTLGLTLAKK--FDLGVTMVDVNSRALDLCRQNAIDNAVSN 109

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173
               L S+ + SV   +D I+SNPP
Sbjct: 110 SKIEL-SNIYESVSEKYDAIISNPP 133


>gi|254671959|emb|CBA04367.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|319410481|emb|CBY90842.1| Uncharacterized RNA methyltransferase BH0687 [Neisseria
           meningitidis WUE 2594]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + KA+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|258593160|emb|CBE69479.1| SAM-dependent methyltransferase [NC10 bacterium 'Dutch sediment']
          Length = 266

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LDLG G G +   L    P  + VG+++     + A+     NG+  R + ++ 
Sbjct: 53  RSTDRVLDLGCGNGVIAFLLAHRHPELRIVGLEVQPALADRARRGVHLNGLQGRIEIVEG 112

Query: 156 DWFSSVEGL-----FDVIVSNPPYIE 176
           D     +GL     FD+++ NPPY E
Sbjct: 113 D-LRQAKGLLPIAGFDMVLCNPPYRE 137


>gi|15602823|ref|NP_245895.1| 16S ribosomal RNA m2G1207 methyltransferase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|81856739|sp|Q9CM79|RSMC_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|12721282|gb|AAK03042.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 328

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +   + ++ P  +    DI   AL  ++     N +    + + SD FS
Sbjct: 191 KVLDLGCGAGVIGAYIKQQYPQVELTMADIHALALASSQRTLAENQLEA--EVIASDVFS 248

Query: 160 SVEGLFDVIVSNPPYIESV 178
           +V G FD+I+SNPP+ + +
Sbjct: 249 NVAGKFDLIISNPPFHDGI 267


>gi|296810328|ref|XP_002845502.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae
           CBS 113480]
 gi|238842890|gb|EEQ32552.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae
           CBS 113480]
          Length = 366

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 36/177 (20%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP- 91
           RQR  L + + +    + +  ILG + F ++ +        PRP+TE          L  
Sbjct: 57  RQR--LRSLVRQRAAGKPLQYILGDQPFGDLEILCKEGVLIPRPDTESYTTRITQHLLAE 114

Query: 92  -RIEKRDVVRILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVT 143
            R   R  VRI+D+ TGTG + L   +LL  S P    +GVDIS  AL +AK N    + 
Sbjct: 115 HRRYPRQSVRIIDICTGTGCIPLLLHSLLAPSIPALSVIGVDISPTALSLAKKNLEHNIE 174

Query: 144 NG-----VSERFDTLQSDWFS--------SVEGL------------FDVIVSNPPYI 175
           NG       +    +Q+D  +        S  G+            +D+++SNPPYI
Sbjct: 175 NGNLLSRARDEVHFVQADILTPRSLDPDGSELGMLLSRLQQEHRDGWDLLISNPPYI 231


>gi|163858002|ref|YP_001632300.1| putative methylase [Bordetella petrii DSM 12804]
 gi|163261730|emb|CAP44032.1| putative methylase [Bordetella petrii]
          Length = 376

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ N    G+ E  + +Q+D F   +
Sbjct: 202 DIGTGTG-VLAAVLARRGVRRIVATDQDPRALACARENLARLGLHESVELMQADLFP--D 258

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G  D++V NPP++ +     +   + D D R+ L G + GL+ +
Sbjct: 259 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LRGFLQGLAAH 301


>gi|281491999|ref|YP_003353979.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375708|gb|ADA65212.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
          Length = 200

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSE 148
           L   +      +LD+G G G + L L K+  F  GV  VD++ +AL++ + NA+ N VS 
Sbjct: 52  LENYQPESAKSLLDVGCGYGTLGLTLAKK--FDLGVTMVDVNSRALDLCRQNAIDNAVSN 109

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPP 173
               L S+ + SV   +D I+SNPP
Sbjct: 110 SKIEL-SNIYESVSEKYDAIISNPP 133


>gi|303250439|ref|ZP_07336636.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251480|ref|ZP_07533387.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650427|gb|EFL80586.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860944|gb|EFM92950.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 329

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 250 NIEERFDLIVSNPPFHDGI 268


>gi|300717996|ref|YP_003742799.1| S-adenosyl-L-methionine-dependent methyltransferase [Erwinia
           billingiae Eb661]
 gi|299063832|emb|CAX60952.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
          Length = 277

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 16/85 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERFDT 152
           R+LD+GTG+G + L L + +      G D+   A+E+       A+ NA  +  ++R   
Sbjct: 79  RVLDIGTGSGLIALMLAQRT------GQDVEVDAVELDEQAVGQARENAAESPWADRIHV 132

Query: 153 LQSD---WFSSVEGLFDVIVSNPPY 174
            Q D   W  + E  + +IVSNPPY
Sbjct: 133 WQDDIVHWSKNAEQRYSLIVSNPPY 157


>gi|289422828|ref|ZP_06424661.1| methyltransferase small [Peptostreptococcus anaerobius 653-L]
 gi|289156738|gb|EFD05370.1| methyltransferase small [Peptostreptococcus anaerobius 653-L]
          Length = 249

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 6/100 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  ++++    +++DLGTGTG + + +  +S   K +GV+I  +  E+A  + 
Sbjct: 32  IDAVLLANFSKVKRGS--KVVDLGTGTGIIPVLISGKSRADKIIGVEIQEEVAEMATRSV 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIES 177
             N + +R   L  D    +S+ G    DV+VSNPPY+ S
Sbjct: 90  KLNDLEDRVIILNEDLNNITSLIGKNTVDVVVSNPPYMHS 129


>gi|303251779|ref|ZP_07337950.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249080|ref|ZP_07531087.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307251279|ref|ZP_07533199.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|302649209|gb|EFL79394.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854368|gb|EFM86564.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306856677|gb|EFM88813.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 329

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 250 NIEERFDLIVSNPPFHDGI 268


>gi|282866035|ref|ZP_06275083.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
 gi|282559074|gb|EFB64628.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
          Length = 293

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 38/78 (48%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R+    V RI+DLG GTG    ALL+  P  +   VD S   L      A   G++ER
Sbjct: 47  LARLAGDGVTRIVDLGAGTGTGTFALLERFPAARVTAVDSSPDMLARLAGTARLRGLAER 106

Query: 150 FDTLQSDWFSSVEGLFDV 167
             TL +D   ++ GL D 
Sbjct: 107 VHTLHADADEALTGLVDT 124


>gi|317404647|gb|EFV85044.1| methyltransferase small [Achromobacter xylosoxidans C54]
          Length = 376

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + +  D+  +AL  A+ N    G+S++ +  Q+D F   E
Sbjct: 203 DIGTGTG-VLAAVLARRGGKRVIATDMDPRALACARENLERLGLSKQVEVAQADLFP--E 259

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           G   + V NPP++ +     +   V D D R+ L G ++GL+ + T
Sbjct: 260 GRVSLAVCNPPWLPARPSSPVEHAVYDPDSRM-LRGFLNGLAAHLT 304


>gi|282865730|ref|ZP_06274780.1| methylase [Streptomyces sp. ACTE]
 gi|282559374|gb|EFB64926.1| methylase [Streptomyces sp. ACTE]
          Length = 228

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 10/118 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            RL      + P+ +T LL+      ++ R E      +LDLGTG+GA  LAL       
Sbjct: 13  ARLVTLPGVYAPQHDTHLLM-----AAVNREEIGPGTDVLDLGTGSGA--LALHAAQRGA 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           +   VD++ +A+  A+ NA+      R    +SD  S++ G  +D+++ NPPY+ S +
Sbjct: 66  RVTAVDVARRAVMTARLNALIR--RRRISVHRSDLLSALPGRSYDLVICNPPYVPSPL 121


>gi|156842993|ref|XP_001644566.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115212|gb|EDO16708.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 324

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 37/240 (15%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIE 94
           +  A ++   H  +  IL  + F ++ +        PR ETE  V     ++      +E
Sbjct: 57  IKKACIQRFHHIPLQYILKSQPFGSLNIKCQPCVLIPRWETEEWVMDLIQSIKNGKQSLE 116

Query: 95  KRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
            ++ + I+DL TG+G + L L +E     +       VD S  A+++   N + +     
Sbjct: 117 SKNQISIVDLCTGSGCIALLLKRELSKILNSNLNVKAVDCSDSAIDLVNRNKLESSEDPI 176

Query: 149 -----RFDTLQSDWFSSV--EGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGI 200
                +FD LQS+   S+      D++  NPPYI +S     +   V+ F+P+++L G  
Sbjct: 177 DIEVLKFDILQSNNIDSILSNQKIDILTCNPPYIPKSDFQRDVTKSVKLFEPKLALIGDK 236

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +    Y  + +    H+N                   ++E   +  V   KDY  ND  L
Sbjct: 237 E---FYSNLLEKWIPHINS-----------------FVYEVGNIDQVKFVKDYISNDNTL 276


>gi|28209992|ref|NP_780936.1| methyltransferase [Clostridium tetani E88]
 gi|28202427|gb|AAO34873.1| methyltransferase [Clostridium tetani E88]
          Length = 258

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   I++ D   ILDL +GTG V   +  +  F K +G++I    +++AK  A
Sbjct: 41  VDAVLLANFANIKRND--NILDLCSGTGIVPFIISGKRKFNKILGIEIQEDMVDMAKRTA 98

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174
           + N + E+   +  D   +      G FDV+  NPPY
Sbjct: 99  MYNELEEKVKFILGDLKDTKLLKNLGEFDVVTVNPPY 135


>gi|299131911|ref|ZP_07025106.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2]
 gi|298592048|gb|EFI52248.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2]
          Length = 301

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 14/97 (14%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138
           +L+D  L  S PR       R+LDLGTGTG + +A  K     + +   DI  +++ +AK
Sbjct: 149 MLLDRVLCQSTPR-------RVLDLGTGTGVLAIAAAKA--LHRSILASDIDPRSVVVAK 199

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
            NAV NGV    + + +  F S      G FD++++N
Sbjct: 200 ENAVLNGVGRDVEAIHAIGFGSPRFAETGPFDLVLAN 236


>gi|148271333|ref|YP_001220894.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829263|emb|CAN00175.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 407

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG GTG +  A+    P  + +  D S  A++ A++    NG+++R   ++ D  S+V
Sbjct: 264 VDLGCGTGVIASAVALARPDLRLIATDQSWAAVDSARATVAANGLADRVTVVRDDAGSTV 323

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +G  D+++ NPP+     V   GL  R F
Sbjct: 324 PDGSADLVLLNPPFHTGATVHA-GLAPRLF 352


>gi|229829476|ref|ZP_04455545.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM
           14600]
 gi|229791907|gb|EEP28021.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM
           14600]
          Length = 254

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + + +       +   ++I   + ++A+ +A  NG+ +R + ++ D   
Sbjct: 52  RVLDLGTGTGVIPILMEARYGGAEYKALEIQADSCDMARRSARLNGLEDRIEIVEGDLTR 111

Query: 160 SVE----GLFDVIVSNPPYI 175
           + E      FDV+  NPPY+
Sbjct: 112 AHEIFGPASFDVVTCNPPYM 131


>gi|323340128|ref|ZP_08080392.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644]
 gi|323092319|gb|EFZ34927.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644]
          Length = 201

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L+L K++P      VD++  ALE+AK NA  N + +     +S  + 
Sbjct: 62  KILDVGCGYGPIGLSLAKKNPDAMVEMVDVNELALELAKKNAAKNTI-KNVSIHESSIYE 120

Query: 160 SVEGL-FDVIVSNPP 173
           +VE   F  IV+NPP
Sbjct: 121 NVEETNFSTIVTNPP 135


>gi|262044984|ref|ZP_06018026.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037711|gb|EEW38940.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 347

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 2/85 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E     ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG++  
Sbjct: 194 LSTLESHTKGKVLDVGCGAGVLAAALASHSPKVRLTLCDVSAPAVEASRATLAANGLAG- 252

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            D   S+ FS V G FD+I+SNPP+
Sbjct: 253 -DVFASNVFSEVNGRFDMIISNPPF 276


>gi|322834524|ref|YP_004214551.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
 gi|321169725|gb|ADW75424.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
          Length = 348

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+  G G +   L   SP  K    D+S  A+E +++    N +    + + S+ +S
Sbjct: 199 KVLDVACGAGVLASVLAMYSPKMKITLSDVSAAAIEASRATLAANDLPG--EVIASNVYS 256

Query: 160 SVEGLFDVIVSNPPYIESV 178
            + G FD+I+SNPP+ E +
Sbjct: 257 DIAGRFDMIISNPPFHEGL 275


>gi|297159266|gb|ADI08978.1| rRNA or tRNA methyltransferase [Streptomyces bingchenggensis BCW-1]
          Length = 523

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 11/135 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R LDLGTG+G   L   + +        D + +AL IA+     +G +E  D  +   
Sbjct: 170 VARALDLGTGSGIQALHASRHAASV--TATDTNPRALHIARLTLALSGAAEP-DLREGSL 226

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V +  +D+IVSNPP++ S             D  +  DGG+ G    RT+    + H
Sbjct: 227 FEPVADETYDLIVSNPPFVISPPSSA-------GDRLVYRDGGMSGDDLCRTLVQRSAGH 279

Query: 217 LNKDGLCSVEIGYNQ 231
           L   G C +   +  
Sbjct: 280 LTDGGWCQLLANWQH 294


>gi|223932349|ref|ZP_03624352.1| methyltransferase small [Streptococcus suis 89/1591]
 gi|223899030|gb|EEF65388.1| methyltransferase small [Streptococcus suis 89/1591]
          Length = 193

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+G G G + L L K    F  K   +DI+ +AL++A  NA  NGV  +    QS+ +
Sbjct: 58  VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 112

Query: 159 SSVEGLFDVIVSNPP 173
            +V+  F+ IVSNPP
Sbjct: 113 ENVDETFNHIVSNPP 127


>gi|323497775|ref|ZP_08102789.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM
           21326]
 gi|323317122|gb|EGA70119.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM
           21326]
          Length = 237

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   + S       +DI   ALE A+SN  T+  S+R    + +    
Sbjct: 44  VLDIGTGTGLLALMCCQRSSNIAVDAIDIDRHALEAARSNFSTSPWSQRITLHKGNVLQH 103

Query: 160 SVEGLFDVIVSNPPYIES 177
             +  FD I+ NPPY  S
Sbjct: 104 PFDHCFDTIICNPPYFNS 121


>gi|310778320|ref|YP_003966653.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
 gi|309747643|gb|ADO82305.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
          Length = 224

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++L++GTGTG + + L       K   +++  +  E+A+ N   N + +R + +  D   
Sbjct: 45  KLLEIGTGTGIISILLSDREEIEKITALEVQAEMAELAERNVKRNSLEKRIEVVLGDVKE 104

Query: 160 SVEG-LFDVIVSNPPYI 175
              G ++D ++SNPPY+
Sbjct: 105 MKAGNVYDYVISNPPYM 121


>gi|209878063|ref|XP_002140473.1| hypothetical protein [Cryptosporidium muris RN66]
 gi|209556079|gb|EEA06124.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
          Length = 243

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 38/207 (18%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGV 127
           +EP  +T  L D+ L      I K +   I ++G G+G +  ++LKE      +   +  
Sbjct: 16  YEPSDDTFFLEDT-LKQETEIIVKANPAIICEVGCGSGYISSSILKELNKRQIYPLTLLT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNPPYIESV 178
           DI+  A+ +AK     N +S   + +  + F S           G+ D+I+ NPPY    
Sbjct: 75  DINKSAINLAKRTITHNNISSGTEFINMELFDSFRNINRSKLNNGILDLIIFNPPY---- 130

Query: 179 IVDCLGLEVRDFDPRISLD----GGIDGL-----------SHYRTIADGV---SRHLNKD 220
            V CL  E+     + ++D    GG++GL           + ++T  D V      L+  
Sbjct: 131 -VPCLEDELIQLRKQCNIDVAWAGGLNGLEIINRFLFGKDNLHKTKLDEVICLYNILSYG 189

Query: 221 GLCSVEI-GYNQKVDVVRIFESRKLFL 246
           GLC + + G N+ +DV+ +    K ++
Sbjct: 190 GLCYLLLEGRNKPIDVINLLRQNKNYI 216


>gi|88800042|ref|ZP_01115612.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
 gi|88777168|gb|EAR08373.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
          Length = 367

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 68/151 (45%), Gaps = 28/151 (18%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           E RP+   LV  +    LP  +K     +LDLG G G + LA  K  P  + V +D + +
Sbjct: 202 ENRPDPGALVFLSYYEHLPAADK-----VLDLGCGNGILGLAYFKAHPDAQVVLIDENAQ 256

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           AL+ A+ N   N +     T+ S+  +++     FD+I+ NPP+ +              
Sbjct: 257 ALKSAEQNWTLNDLPGNAITVHSNGLNALAADQQFDLILCNPPFHQDN------------ 304

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               +L  GI      + + D   +HL+KDG
Sbjct: 305 ----TLTEGIA-----QKLFDDAKKHLSKDG 326


>gi|83955504|ref|ZP_00964135.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1]
 gi|83840148|gb|EAP79323.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1]
          Length = 391

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+    G   LA L        V VD S  ALE+A+  A   GVS+RF T Q D F 
Sbjct: 220 RVLDVFAHVGGFSLAALANGAS-SAVAVDGSAPALELAQQGAEAMGVSDRFATRQGDAFD 278

Query: 160 SVEGL------FDVIVSNPP 173
            +  L      FDV++ +PP
Sbjct: 279 ILTALRAEGEEFDVVICDPP 298


>gi|328948386|ref|YP_004365723.1| methyltransferase type 11 [Treponema succinifaciens DSM 2489]
 gi|328448710|gb|AEB14426.1| Methyltransferase type 11 [Treponema succinifaciens DSM 2489]
          Length = 244

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  DLGTGTG + L + +++P      ++I  ++ ++A+ N   N + E+     +D   
Sbjct: 46  KACDLGTGTGIIPLLMSEKNPEANFECIEIQEESADMARRNVELNNLQEKIKIFCADIKE 105

Query: 160 SVEGL----FDVIVSNPPYIE 176
             + L    FD +VSNPPYIE
Sbjct: 106 PFKVLQKNSFDAVVSNPPYIE 126


>gi|313159331|gb|EFR58695.1| methyltransferase domain protein [Alistipes sp. HGB5]
          Length = 238

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157
           RILD+GTGTG + L + + +P  +  GVD+  + +  A+ NA  +    R  F+      
Sbjct: 37  RILDVGTGTGLIALMMAQRAPEARITGVDV--EEVSQARENAAASPWGGRVVFEQCPVQE 94

Query: 158 FSSVEGLFDVIVSNPPY 174
           F+  E  FD+IVSNPP+
Sbjct: 95  FAPDEH-FDLIVSNPPF 110


>gi|302023865|ref|ZP_07249076.1| methyltransferase [Streptococcus suis 05HAS68]
          Length = 196

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+G G G + L L K    F  K   +DI+ +AL++A  NA  NGV  +    QS+ +
Sbjct: 61  VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 115

Query: 159 SSVEGLFDVIVSNPP 173
            +V+  F+ IVSNPP
Sbjct: 116 ENVDETFNHIVSNPP 130


>gi|291550588|emb|CBL26850.1| Predicted O-methyltransferase [Ruminococcus torques L2-14]
          Length = 247

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG G + + L  ++      G++I  +  E+A+ +   N + +R   +  D   +
Sbjct: 49  VLDMGTGNGIIPVLLAGKTKGKHFTGLEIQAETAEMARRSVAHNHLEDRISIVTGDIKEA 108

Query: 161 VE----GLFDVIVSNPPYI 175
            E      FDVI +NPPY+
Sbjct: 109 AERFKPAFFDVITTNPPYM 127


>gi|268572659|ref|XP_002649016.1| Hypothetical protein CBG21464 [Caenorhabditis briggsae]
          Length = 209

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           Y ++   + D +EP  +T LL+D A+   +  I  R    +L++G G+G V   + +   
Sbjct: 8   YRLQAIRAHDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALG 66

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176
                V  D++  AL++    A  N +  + D +++D F+ +E L    DV++ NPPY+ 
Sbjct: 67  GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124

Query: 177 S 177
           +
Sbjct: 125 T 125


>gi|312114271|ref|YP_004011867.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
 gi|311219400|gb|ADP70768.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
          Length = 336

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+T   VD+  A+   R  +  V R  D+  G G   +A+ K  P  + + +D++ KA++
Sbjct: 135 PDTYKFVDAINAWLNGRAGQ--VGRAADVCAGAGPGGIAIAKACPGAEVLLLDLNPKAVD 192

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            A  NA   G      T+ S+ FS+  G FD++VS+PPY+
Sbjct: 193 FAAVNAAVAGRPNACATM-SNLFSNAAGSFDLVVSHPPYL 231


>gi|313204259|ref|YP_004042916.1| methyltransferase type 11 [Paludibacter propionicigenes WB4]
 gi|312443575|gb|ADQ79931.1| Methyltransferase type 11 [Paludibacter propionicigenes WB4]
          Length = 237

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 16/160 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L L + S       +DI   A+  A+ N + +   +R     S   ++
Sbjct: 41  ILDVGTGTGLIALMLAQRSSAMI-TAIDIDQDAVFQARENTLNSPWKDRVAVQSSSLQEF 99

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++    FD+IVSNPPY  +         +++ D   +     D L+H   I +G  + L
Sbjct: 100 TANESATFDLIVSNPPYFVN--------SLKNPDKNRATARHTDSLTHEELI-NGSLKLL 150

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYG 254
           +  G   + +  N+ +  V   +S+ LF   LV  F   G
Sbjct: 151 SAGGRLCIILPVNEGMQCVDFAQSKGLFCSKLVKVFPKPG 190


>gi|289803616|ref|ZP_06534245.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 134

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 23/108 (21%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP
Sbjct: 5   ALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPP 62

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +                      DG    L   +T+  G  RHLN  G
Sbjct: 63  F---------------------HDGMQTSLDAAQTLIRGAVRHLNSGG 89


>gi|332830369|gb|EGK02997.1| hypothetical protein HMPREF9455_01247 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 236

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DW 157
           + LD+GTGTG V L L +         +DI   A+E AK N   +  S++    +S    
Sbjct: 40  KALDIGTGTGLVALMLAQRKDKLHIDAIDIDHYAIEQAKENIKQSPFSDQIQAFESSLQH 99

Query: 158 FSSVEGLFDVIVSNPPY 174
           F      +D+IVSNPP+
Sbjct: 100 FRESRQQYDLIVSNPPF 116


>gi|146318741|ref|YP_001198453.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33]
 gi|146320945|ref|YP_001200656.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33]
 gi|253751842|ref|YP_003024983.1| methyltransferase [Streptococcus suis SC84]
 gi|253753665|ref|YP_003026806.1| methyltransferase [Streptococcus suis P1/7]
 gi|253755454|ref|YP_003028594.1| methyltransferase [Streptococcus suis BM407]
 gi|145689547|gb|ABP90053.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33]
 gi|145691751|gb|ABP92256.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33]
 gi|251816131|emb|CAZ51755.1| putative methyltransferase [Streptococcus suis SC84]
 gi|251817918|emb|CAZ55695.1| putative methyltransferase [Streptococcus suis BM407]
 gi|251819911|emb|CAR45978.1| putative methyltransferase [Streptococcus suis P1/7]
 gi|319758197|gb|ADV70139.1| 16S RNA G1207 methylase RsmC [Streptococcus suis JS14]
          Length = 196

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K     K   +DI+ +AL++A  NA  NGV  +    QS+ + +
Sbjct: 61  VLDVGCGYGPIGLTLAKVFST-KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYEN 117

Query: 161 VEGLFDVIVSNPP 173
           V+  F+ IVSNPP
Sbjct: 118 VDETFNHIVSNPP 130


>gi|46143347|ref|ZP_00135433.2| COG2813: 16S RNA G1207 methylase RsmC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209459|ref|YP_001054684.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae L20]
 gi|226712982|sp|A3N3U3|RSMC_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|126098251|gb|ABN75079.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 329

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTFAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
           ++E  FD+IVSNPP+ + +
Sbjct: 250 NIEERFDLIVSNPPFHDGI 268


>gi|308160026|gb|EFO62538.1| DNA methyltransferase [Giardia lamblia P15]
          Length = 228

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 18/171 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+    S   +  R  V I   G+G+G V + +L+  P
Sbjct: 5   YEATLDDCRHVYLPDEDTFLLIDTLTELS-KELHPRSFVEI---GSGSGVVSVHILQVFP 60

Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPP 173
              +G  VDIS  A+++ +  A  N V         F+ L +   SS    FD++V NPP
Sbjct: 61  GILEGHAVDISPYAVDMTRRTASLNSVPLCVHEGSFFEPLNACTNSSKPARFDLVVFNPP 120

Query: 174 YIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           Y+ S   D  LG      D  ++L GG +G        + +  +L  DG C
Sbjct: 121 YVPSSEADPALG----PLD--LALAGGKNGSEVMLRFLELLPSYLAIDGHC 165


>gi|167771786|ref|ZP_02443839.1| hypothetical protein ANACOL_03158 [Anaerotruncus colihominis DSM
           17241]
 gi|167666426|gb|EDS10556.1| hypothetical protein ANACOL_03158 [Anaerotruncus colihominis DSM
           17241]
          Length = 206

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 8/101 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P   ++VD  LA    RI +RD V ++D+G G+G + LALL E   +KG  +DI+  ALE
Sbjct: 20  PIYPVIVDDILA----RIPRRDGV-LIDVGCGSGHLGLALL-ERTRYKGCLIDINQTALE 73

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174
           + +++A   G+++R   ++ D  S    +G  D+I+S   Y
Sbjct: 74  LGRAHARERGLADRAVFMRQDVHSMDFPDGYADLIISRGSY 114


>gi|42518514|ref|NP_964444.1| hypothetical protein LJ0419 [Lactobacillus johnsonii NCC 533]
 gi|41582799|gb|AAS08410.1| hypothetical protein LJ_0419 [Lactobacillus johnsonii NCC 533]
 gi|329666784|gb|AEB92732.1| putative RNA methylase [Lactobacillus johnsonii DPC 6026]
          Length = 203

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 12/142 (8%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           Q +F  N   +  +H   + I    D  +++ T  +  F     ++L VD      +  +
Sbjct: 6   QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56

Query: 94  EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +  D  +  ILD+GTG G + L   K  P  +   VD++ +AL++AK NA  N + +  +
Sbjct: 57  KNVDFPKDGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115

Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173
             QSD +  V+  + +I++NPP
Sbjct: 116 IYQSDIYEQVDKKYGLIITNPP 137


>gi|318079764|ref|ZP_07987096.1| methyltransferase [Streptomyces sp. SA3_actF]
          Length = 115

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+GA  LALL      +    D+S +A+  A+ NA   G  +R   L+ D    
Sbjct: 26  VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 81

Query: 161 VEGL-FDVIVSNPPYIE 176
           V G  FD++VSNPPY+ 
Sbjct: 82  VRGQRFDLVVSNPPYVP 98


>gi|307246943|ref|ZP_07529008.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255925|ref|ZP_07537726.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260378|ref|ZP_07542085.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852228|gb|EFM84468.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861193|gb|EFM93186.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865629|gb|EFM97510.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 329

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEGT--VVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +E  FD+IVSNPP+ + +
Sbjct: 250 HIEERFDLIVSNPPFHDGI 268


>gi|168179782|ref|ZP_02614446.1| type I restriction-modification system, M subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669249|gb|EDT81225.1| type I restriction-modification system, M subunit [Clostridium
           botulinum NCTC 2916]
          Length = 511

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           S +   L  + K+D+  + D   G+G++ L + KE+   K  G +++     +A+ N + 
Sbjct: 207 SKILAKLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRKFYGQELTSTTYNLARMNMLL 266

Query: 144 NGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174
           + VS ERFD    D   + + +   FD +V+NPPY
Sbjct: 267 HDVSYERFDIRNDDTLENPQHIDMKFDAVVANPPY 301


>gi|325957946|ref|YP_004289412.1| methylase [Methanobacterium sp. AL-21]
 gi|325329378|gb|ADZ08440.1| methylase [Methanobacterium sp. AL-21]
          Length = 197

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 17/164 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  + +  + + +EP  +T L  ++     L R  K DV   L++GTGTG + +   + 
Sbjct: 3   EYKGITIYTNEEVYEPAEDTFLFAEN---LELNR--KDDV---LEIGTGTGLIAICASQN 54

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           S   K +  DI+  A++ A  N +T+      +  + + F  V E  FD+++ N PY+ +
Sbjct: 55  SR--KVIATDINEAAIKCALKNVITHRAY-NVELREGNLFEPVAEEKFDLVLFNTPYLPT 111

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              + L  ++       + DGG+DG        DGV   L K+G
Sbjct: 112 SEEEQLEGQIN-----TAFDGGLDGRETIDAFLDGVKDVLKKEG 150


>gi|307262508|ref|ZP_07544153.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306867885|gb|EFM99716.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 329

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +E  FD+IVSNPP+ + +
Sbjct: 250 HIEERFDLIVSNPPFHDGI 268


>gi|163791692|ref|ZP_02186086.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7]
 gi|159873040|gb|EDP67150.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7]
          Length = 201

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + LAL K+ P  K   VD++ +AL +AK NA  N +S       SD + S
Sbjct: 63  LLDVGCGYGPMGLALAKDDPERKVEMVDVNERALGLAKQNASNNRLSNVL-IHTSDIYES 121

Query: 161 VEGL-FDVIVSNPP 173
           V G  F  IVSNPP
Sbjct: 122 VVGKDFAAIVSNPP 135


>gi|294142465|ref|YP_003558443.1| methyltransferase [Shewanella violacea DSS12]
 gi|293328934|dbj|BAJ03665.1| methyltransferase, putative [Shewanella violacea DSS12]
          Length = 343

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LPR++ R    +LD G G G +  ALLK  P  +   VDI+  AL   +     N    
Sbjct: 197 NLPRMKGR----VLDFGCGAGVIAAALLKAQPKLQIECVDINAMALASCELTLKANNFIA 252

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
              T  SD  +  +  FD I+SNPP+
Sbjct: 253 A--TYPSDGLNQTQDKFDGIISNPPF 276


>gi|282860068|ref|ZP_06269149.1| methyltransferase small domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282587156|gb|EFB92380.1| methyltransferase small domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 234

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQ 154
           + ILD+GTGTG + L + +  P  K VG+DI   A++ A  N   +   ER      TLQ
Sbjct: 34  LNILDIGTGTGLIALMMAQRFPNSKVVGIDIDENAIKDALYNVRNSSFIERVSIEQITLQ 93

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
           + +       FD +V NPPY
Sbjct: 94  T-YGKKHANEFDAVVCNPPY 112


>gi|322418198|ref|YP_004197421.1| type 11 methyltransferase [Geobacter sp. M18]
 gi|320124585|gb|ADW12145.1| Methyltransferase type 11 [Geobacter sp. M18]
          Length = 267

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R  DLGTG G + L L + +       ++      +IA  N   NG+SER + ++ 
Sbjct: 51  RQGERCADLGTGCGVIALLLARLTENCSVTAIEFQQVMADIAARNVALNGLSERVEIVEE 110

Query: 156 DWFSSVEG-----LFDVIVSNPPY 174
           D   S++G      FD++VSNPPY
Sbjct: 111 DVI-SLKGHFPVDSFDLVVSNPPY 133


>gi|225387403|ref|ZP_03757167.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
           DSM 15981]
 gi|225046448|gb|EEG56694.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
           DSM 15981]
          Length = 184

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTG + + L  ++P     G++I  ++ ++A+ +   N + E+ + +  D   + 
Sbjct: 65  LDLGTGTGIIPILLEAKTPGRHFTGLEIQQESADMARRSVAYNRLEEKVEIVTGDIKEAG 124

Query: 162 E----GLFDVIVSNPPYIESV 178
                  FDV+ SNPPY+ S 
Sbjct: 125 RLFKLASFDVVTSNPPYMNSA 145


>gi|291541913|emb|CBL15023.1| ribosomal protein L11 methyltransferase [Ruminococcus bromii L2-63]
          Length = 311

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + +A L      + VGVDI   A+  A  NA  NGV++RF  +   +   
Sbjct: 174 VLDVGCGSGILGIATLLLGAD-RAVGVDIDETAVRTAAENAEINGVADRFTAICGSFTDK 232

Query: 161 VEGLFDVIVSN 171
           VEG +D++++N
Sbjct: 233 VEGKYDIVLAN 243


>gi|257056435|ref|YP_003134267.1| methyltransferase family protein [Saccharomonospora viridis DSM
           43017]
 gi|256586307|gb|ACU97440.1| methyltransferase family protein [Saccharomonospora viridis DSM
           43017]
          Length = 498

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V  +LDLGTG G   L   K +        D S +AL +A++    N +    + LQ
Sbjct: 156 RRPVESVLDLGTGNGVQALHASKYAQRI--TATDTSARALRLAQATFALNELD--VELLQ 211

Query: 155 SDWFSSV-EGLFDVIVSNPPYI 175
            DWF+ V    FD IV NPP++
Sbjct: 212 GDWFAPVARRRFDRIVCNPPFV 233


>gi|126179900|ref|YP_001047865.1| putative methylase [Methanoculleus marisnigri JR1]
 gi|125862694|gb|ABN57883.1| putative methylase [Methanoculleus marisnigri JR1]
          Length = 188

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 16/111 (14%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    + P  ++ LL+ +ALA      E R   R+L++GTG+G V   L+  +     V 
Sbjct: 2   LPDQVYPPAEDSFLLLRAALA------EVRATDRVLEVGTGSGYVAAGLIGRAASV--VA 53

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +I+  A   A++  V        + +++D F  V G FD+I+ NPPY+ +
Sbjct: 54  TEINPHAARCARARGV--------EAVRTDLFLGVSGPFDLILFNPPYLPT 96


>gi|73663523|ref|YP_302304.1| hypothetical protein SSP2214 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72496038|dbj|BAE19359.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 202

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LLV + L    P   K+    I+D+G G G + L + K SP  +   VDI+ +AL ++
Sbjct: 45  SDLLVTTFLKAYPPGPTKK----IIDVGCGYGPIGLMIAKVSPHHEVTMVDINQRALSLS 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
           + N   N + +  + ++S+  S VE   +D +++NPP
Sbjct: 101 RKNKKRNRI-DNAEIIESNGLSQVEDNTYDFVLTNPP 136


>gi|27467223|ref|NP_763860.1| hypothetical protein SE0305 [Staphylococcus epidermidis ATCC 12228]
 gi|57866133|ref|YP_187778.1| hypothetical protein SERP0182 [Staphylococcus epidermidis RP62A]
 gi|27314766|gb|AAO03902.1|AE016745_1 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636791|gb|AAW53579.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
          Length = 202

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L    P   K     I D+G G G + LA+ K SP  +   +DI+ +AL +A
Sbjct: 45  SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + N   N V +    ++SD  S+V    FD I++NPP
Sbjct: 101 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 136


>gi|328472044|gb|EGF42921.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio parahaemolyticus
           10329]
          Length = 239

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   +R   
Sbjct: 38  MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97

Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177
             +D  S S    F  IV NPPY  +
Sbjct: 98  KHTDVLSFSPPQRFQRIVCNPPYFNT 123


>gi|294810863|ref|ZP_06769506.1| Putative SAM-dependent methyltransferase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326439500|ref|ZP_08214234.1| hypothetical protein SclaA2_00490 [Streptomyces clavuligerus ATCC
           27064]
 gi|294323462|gb|EFG05105.1| Putative SAM-dependent methyltransferase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 245

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 40/90 (44%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           LS       P    L D ++   + R   R   R+LDLG G+GA  L  L   P  +  G
Sbjct: 6   LSYRAHADHPIAAPLSDDSVRRLIDRTVHRADARVLDLGCGSGAWLLRTLSGRPGVRAEG 65

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           VD+S  AL  A   A   GV +R D  + D
Sbjct: 66  VDLSATALRAADERATAAGVRDRLDLHRRD 95


>gi|325278033|ref|ZP_08143557.1| methyltransferase small [Pseudomonas sp. TJI-51]
 gi|324096832|gb|EGB95154.1| methyltransferase small [Pseudomonas sp. TJI-51]
          Length = 317

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   +D+G GTG   L + + +   +   VDI+  AL     NA   GVS       SD 
Sbjct: 139 VEHAVDIGCGTGIGALLIARAAHHAQVSAVDINPLALRYTAVNAALAGVSN-ISVKHSDL 197

Query: 158 FSSVEGLFDVIVSNPPYI 175
              V G FD+IV+NPPY+
Sbjct: 198 LDDVPGNFDLIVANPPYM 215


>gi|257055191|ref|YP_003133023.1| HemK-like methylase [Saccharomonospora viridis DSM 43017]
 gi|256585063|gb|ACU96196.1| HemK-related putative methylase [Saccharomonospora viridis DSM
           43017]
          Length = 218

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 26/155 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T+LLV++    +L     R   R+LD+GTGTGA+ +A ++ S       VD+S 
Sbjct: 10  YRPQDDTDLLVEALSGLTL-----RSGDRVLDVGTGTGALAVAAVR-SGATDVTAVDVSL 63

Query: 132 KALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +AL     NA  + +     R D  +        G FD++++NPPY     V C G    
Sbjct: 64  RALAATWLNARLHRLPVRVRRADVTE----RPPHGRFDLVLANPPY-----VPCPGKG-- 112

Query: 189 DFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDG 221
               R+S   D G DG +    +   V R L++ G
Sbjct: 113 ----RVSRRWDAGPDGRAVIDPLCVAVPRLLSERG 143


>gi|317503386|ref|ZP_07961430.1| metallothionein SmtA [Prevotella salivae DSM 15606]
 gi|315665481|gb|EFV05104.1| metallothionein SmtA [Prevotella salivae DSM 15606]
          Length = 231

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG + + + +  P  + V +DI  +A   AK N   +  + R   + +    
Sbjct: 38  RLLDIGTGTGLIAMMMAQRFPEAEIVAIDIDEEACLQAKENVANSPFATRVRVMHTSLQQ 97

Query: 160 -SVEGLFDVIVSNPPY 174
              E  FD IVSNPP+
Sbjct: 98  YDGENCFDCIVSNPPF 113


>gi|288799851|ref|ZP_06405310.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333099|gb|EFC71578.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 239

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156
           RILD+GTG+G + L + +  P  + V +DI   A + A SN   +   +R   + +   D
Sbjct: 38  RILDIGTGSGLIALMMAQRCPLAQIVALDIDEGAYKQAVSNVEGSVFCDRISVVHASLQD 97

Query: 157 WFS----SVEGLFDVIVSNPPY 174
           +       +EG FD IVSNPP+
Sbjct: 98  YCKVNKVGLEGSFDAIVSNPPF 119


>gi|262065982|ref|ZP_06025594.1| ribosomal RNA small subunit methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291380339|gb|EFE87857.1| ribosomal RNA small subunit methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D+ L F+     + KR++ ++LD+GTG G + + L   +   + VG+DI  + ++ A   
Sbjct: 29  DTILLFNYLNKSLSKRNI-KLLDIGTGNGVLPILLSDNAMIEEIVGIDIQNENIQRANKA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +   F +L    + +    FDV++SNPPY+E
Sbjct: 88  LELNKIEKNINFTSLDVKEYKNA-NYFDVVISNPPYME 124


>gi|116871639|ref|YP_848420.1| hypothetical protein lwe0219 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740517|emb|CAK19637.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 201

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + KE P  +   VD++ +ALE+AK NA  N +S      +S  + 
Sbjct: 62  KILDVGCGYGPMGLTVAKEFPESQIEMVDVNLRALELAKENAELNKISNT-HIYESSVYD 120

Query: 160 SVEGL-FDVIVSNPP 173
           +V    +  I+SNPP
Sbjct: 121 NVTATDYQAIISNPP 135


>gi|307258110|ref|ZP_07539862.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863473|gb|EFM95404.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENSLEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +E  FD+IVSNPP+ + +
Sbjct: 250 HIEERFDLIVSNPPFHDGI 268


>gi|319949423|ref|ZP_08023485.1| putative methyltransferase [Dietzia cinnamea P4]
 gi|319436920|gb|EFV91978.1| putative methyltransferase [Dietzia cinnamea P4]
          Length = 222

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 19/112 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTGAVCL-ALLKESPFFKGVGV 127
           + P+ ++ LL D+        +E  DVV   R+LD+ TG+G + + A LK +   + V  
Sbjct: 16  YAPQDDSWLLCDA--------LEDCDVVAGKRVLDICTGSGILAIEAALKGA--REVVAY 65

Query: 128 DISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           DIS  A+  A SNA   GV    R  TL    ++   G FDV+VSNPPY+ S
Sbjct: 66  DISPAAVACASSNAERAGVDVDVRLGTLADARYA---GPFDVVVSNPPYVPS 114


>gi|110834447|ref|YP_693306.1| hypothetical protein ABO_1586 [Alcanivorax borkumensis SK2]
 gi|123050454|sp|Q0VP64|RSMC_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110647558|emb|CAL17034.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 325

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G + + L +    ++  GVD+S  A+  +  +   NG+  R   +  D FS
Sbjct: 189 KVIDMGCGAGVISVWLARHG--WQVQGVDVSASAVTASTESLARNGLQGRI--MGGDLFS 244

Query: 160 SVEGLFDVIVSNPPY 174
            ++G  D++V+NPP+
Sbjct: 245 PIQGRVDMVVTNPPF 259


>gi|292669920|ref|ZP_06603346.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541]
 gi|292648717|gb|EFF66689.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541]
          Length = 248

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR+  R+   ILDLGTGTG +   LL      +   V+++     +A  N 
Sbjct: 34  MDAVLLAHFPRLTGRE--HILDLGTGTGVI--PLLAADGAAQITAVELNPVQAALAARNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
             NG+SE+    + D+          +FD++ +NPPY
Sbjct: 90  QLNGLSEKITVREGDYRDPSALFACAVFDLVFANPPY 126


>gi|227888774|ref|ZP_04006579.1| methyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227850611|gb|EEJ60697.1| methyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 203

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           Q +F  N   +  +H   + I    D  +++ T  +  F     ++L VD      +  +
Sbjct: 6   QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56

Query: 94  EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +  D  +  ILD+GTG G   L   K  P  +   VD++ +AL++AK NA  N + +  +
Sbjct: 57  KNVDFPKDGILDVGTGYGPTGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115

Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173
             QSD +  V+  + +I++NPP
Sbjct: 116 IYQSDIYEQVDKKYGLIITNPP 137


>gi|331703060|ref|YP_004399747.1| methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801615|emb|CBW53768.1| Methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 240

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +I D GT    + L L K +   K +GV+I  KA++IA  N   NG+ ++ + + +D   
Sbjct: 43  KICDFGTNNAVIPLILSKYTKA-KIIGVEIQNKAVKIANENIKLNGLEDQIEIIHADIKE 101

Query: 158 FSSVEGL-FDVIVSNPPYIE 176
           FS +    FD++V NPP+ +
Sbjct: 102 FSKLHNQEFDLVVCNPPFFK 121


>gi|114327554|ref|YP_744711.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315728|gb|ABI61788.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
          Length = 250

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I  R   R+L+ GTG GA  L L    P  +G GV+ S     +A+ N  TN +  R   
Sbjct: 39  IPARAEERVLEAGTGPGAGLLCLAHRVPGIQGTGVEKSSDIATLARQNVQTNHLENRLSI 98

Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESV 178
           +  D     + +      +D + +NPP+ E  
Sbjct: 99  ITQDILDFAQEMSGSPSNYDHVFANPPWHEEA 130


>gi|160881502|ref|YP_001560470.1| methyltransferase small [Clostridium phytofermentans ISDg]
 gi|160430168|gb|ABX43731.1| methyltransferase small [Clostridium phytofermentans ISDg]
          Length = 207

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G V +   K     +    DIS KA+E++K NA  N V +    LQSD F +
Sbjct: 44  LLDLGCGYGLVGIYASKVLSPARVTMCDISEKAVELSKKNAEYNQVLDELTILQSDGFRN 103

Query: 161 VE-GLFDVIVSNPPY 174
           +    + +I+SNPPY
Sbjct: 104 LPVDEYSLILSNPPY 118


>gi|88860257|ref|ZP_01134895.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2]
 gi|88817455|gb|EAR27272.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2]
          Length = 230

 Score = 47.0 bits (110), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + L L + SPF     ++I  KA   AKSN + +        ++ D  + 
Sbjct: 38  VLDIGAGSGLISLMLKQRSPFISITAIEIDAKAALQAKSN-IAHSQWPDIKVIEHDILTY 96

Query: 161 VEGL-FDVIVSNPPYIE 176
                FD++VSNPP+ +
Sbjct: 97  TSAQPFDLVVSNPPFFQ 113


>gi|109900269|ref|YP_663524.1| methyltransferase small [Pseudoalteromonas atlantica T6c]
 gi|122971506|sp|Q15NR8|TRMN6_PSEA6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|109702550|gb|ABG42470.1| methyltransferase small [Pseudoalteromonas atlantica T6c]
          Length = 263

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFD 151
           I   +  R LD+GTG+G + + L ++S     + G+DI   A+  A  N   +  S R D
Sbjct: 39  INASETQRFLDIGTGSGLLAIMLAQKSSEQTHISGIDIDKDAIGQATRNMANSPWSHRLD 98

Query: 152 TLQSDWFSSVEGL----FDVIVSNPPYIESVIV 180
             Q+   S  +      F +I+SNPPY  S I+
Sbjct: 99  AQQASVQSFTQNCDNPKFALIISNPPYFNSPIL 131


>gi|242241873|ref|ZP_04796318.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144]
 gi|293367917|ref|ZP_06614555.1| methyltransferase domain protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|242234651|gb|EES36963.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144]
 gi|291317946|gb|EFE58354.1| methyltransferase domain protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737832|gb|EGG74064.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU045]
          Length = 244

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L    P   K     I D+G G G + LA+ K SP  +   +DI+ +AL +A
Sbjct: 87  SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 142

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + N   N V +    ++SD  S+V    FD I++NPP
Sbjct: 143 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 178


>gi|187926843|ref|YP_001893188.1| methyltransferase small [Ralstonia pickettii 12J]
 gi|241665172|ref|YP_002983531.1| methyltransferase small [Ralstonia pickettii 12D]
 gi|187728597|gb|ACD29761.1| methyltransferase small [Ralstonia pickettii 12J]
 gi|240867199|gb|ACS64859.1| methyltransferase small [Ralstonia pickettii 12D]
          Length = 380

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 5/111 (4%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L +      V  D   +AL  A+ N    G+  + + +++D F   E
Sbjct: 207 DIGTGTG-VLAAVLAKRGVKHIVATDQDPRALACARDNLAHLGLQSQVEVIEADLFP--E 263

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-SHYRTIADG 212
           G   +IV NPP++ +     +   V D D R+ L G +DGL +H     +G
Sbjct: 264 GRAPLIVCNPPWLPARPSSPIERAVYDPDNRM-LRGFLDGLAAHLEPAGEG 313


>gi|118586640|ref|ZP_01544080.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163]
 gi|118432955|gb|EAV39681.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163]
          Length = 204

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLGTG G V ++L    P  +   VD++ ++L +AK N   N  S   +  QS+ + 
Sbjct: 67  KILDLGTGYGPVGISLKVLKPDLEIDMVDVNQRSLNLAKDNLELNDFSA--NVFQSNIYE 124

Query: 160 SVEGLFDVIVSNPP 173
           +V G +  I+ NPP
Sbjct: 125 NVAGNYAAIIVNPP 138


>gi|26989970|ref|NP_745395.1| HemK family modification methylase [Pseudomonas putida KT2440]
 gi|24984888|gb|AAN68859.1|AE016518_5 modification methylase, HemK family [Pseudomonas putida KT2440]
          Length = 316

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   +D+G G+G   L + + +   +   VDI+  AL     NA   GVS       SD 
Sbjct: 137 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 195

Query: 158 FSSVEGLFDVIVSNPPYI 175
              + G FD+IV+NPPY+
Sbjct: 196 LDGISGTFDLIVANPPYM 213


>gi|305663451|ref|YP_003859739.1| methylase [Ignisphaera aggregans DSM 17230]
 gi|304378020|gb|ADM27859.1| methylase [Ignisphaera aggregans DSM 17230]
          Length = 197

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 31/153 (20%)

Query: 63  VRLTLSSDTFEPRPETELL------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + L LS   + P  ++ +L      +D+ L+ +L            +LG+G+G V +  +
Sbjct: 4   IALLLSDKVYNPSDDSYILTKTISDIDNCLSIAL------------ELGSGSGYVSIYRM 51

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
           K+      + VDIS  ++  +  +A  NG+ +  D +Q D  + +  +  D I  NPPY 
Sbjct: 52  KKCRKSYTIMVDISPCSVRSSWESAKINGIDDLVDVIQCDAGACIRSMSIDTIYFNPPY- 110

Query: 176 ESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206
                    L V +F+    IS  GGIDG++ +
Sbjct: 111 ---------LPVEEFNDILSISWSGGIDGITVW 134


>gi|315502631|ref|YP_004081518.1| methyltransferase small [Micromonospora sp. L5]
 gi|315409250|gb|ADU07367.1| methyltransferase small [Micromonospora sp. L5]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L L   +   +    D+S +AL  A + AV NG  + ++ L+ D  + V
Sbjct: 155 LDLGTGSGVQALHLGTHA--RRVTATDVSERALRFAATTAVLNG--QDWELLRGDMVAPV 210

Query: 162 EG-LFDVIVSNPPYI 175
            G  FD++VSNPP++
Sbjct: 211 AGRRFDLVVSNPPFV 225


>gi|329729449|gb|EGG65852.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU144]
          Length = 244

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L    P   K     I D+G G G + LA+ K SP  +   +DI+ +AL +A
Sbjct: 87  SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKVSPHHQITMLDINNRALALA 142

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + N   N V +    ++SD  S+V    FD I++NPP
Sbjct: 143 EMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPP 178


>gi|148547726|ref|YP_001267828.1| methyltransferase small [Pseudomonas putida F1]
 gi|148511784|gb|ABQ78644.1| methyltransferase small [Pseudomonas putida F1]
          Length = 317

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   +D+G G+G   L + + +   +   VDI+  AL     NA   GVS       SD 
Sbjct: 138 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 196

Query: 158 FSSVEGLFDVIVSNPPYI 175
              + G FD+IV+NPPY+
Sbjct: 197 LDGISGTFDLIVANPPYM 214


>gi|85714686|ref|ZP_01045673.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
 gi|85698571|gb|EAQ36441.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
          Length = 298

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       RILDLG GTG + +A  K S     +  DI  ++  +A+ 
Sbjct: 146 LLLDQVLRGKMPR-------RILDLGAGTGVLAIAAAKAS-RRNVLASDIDPRSAAVARE 197

Query: 140 NAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171
           NA +NGV     ++++  FS+        FD++++N
Sbjct: 198 NAASNGVGNLVQSIRATGFSAPPFRTRAPFDLVLAN 233


>gi|296159505|ref|ZP_06842329.1| methyltransferase small [Burkholderia sp. Ch1-1]
 gi|295890213|gb|EFG70007.1| methyltransferase small [Burkholderia sp. Ch1-1]
          Length = 374

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 14/122 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +  D+GTGTG V  ALL +    K +  D   +AL  A+ N    G  ++ + +Q+D F 
Sbjct: 198 KAFDIGTGTG-VLAALLAKRGVKKIIATDQDPRALACARENLTRLGYDQQVEVVQADLFP 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             EG   ++V NPP++ +     +   + D + R+ L           +  +G++ HL+ 
Sbjct: 257 --EGRAPLVVCNPPWLPARPASPIEYAIYDPESRMLL-----------SFLNGLADHLSP 303

Query: 220 DG 221
            G
Sbjct: 304 GG 305


>gi|256422388|ref|YP_003123041.1| methyltransferase small [Chitinophaga pinensis DSM 2588]
 gi|256037296|gb|ACU60840.1| methyltransferase small [Chitinophaga pinensis DSM 2588]
          Length = 243

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+  V RILD+GTGTG + L L ++S      G+++   A   A++N   +   ER   +
Sbjct: 39  EQSPVSRILDIGTGTGLLSLMLAQQSE-AAITGIELDPAAAGQARTNFDASPWKERLQVI 97

Query: 154 QSDWFSSVEG-LFDVIVSNPPYIE 176
           ++D      G  +D IV+NPP+ E
Sbjct: 98  ETDAKQLPAGEPYDFIVTNPPFYE 121


>gi|124486387|ref|YP_001031003.1| hypothetical protein Mlab_1572 [Methanocorpusculum labreanum Z]
 gi|124363928|gb|ABN07736.1| putative methylase [Methanocorpusculum labreanum Z]
          Length = 193

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 15/110 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +S  + P  +T LL+ +A      R E +   R+L++GTG+GAV  ++ + +P    + V
Sbjct: 5   TSQIYFPAEDTYLLIKAA------RTEVKQEDRVLEIGTGSGAVAKSVAEITPAV--LAV 56

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +I+  A + A+     NG+    + ++ D F  V G FD+I+ N PY+ +
Sbjct: 57  EINPHAAQYARE---VNGI----EVIRGDLFDPVCGEFDLILFNAPYLPT 99


>gi|257126774|ref|YP_003164888.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
 gi|257050713|gb|ACV39897.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
          Length = 209

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGV----SERFDTL 153
           +LD+G G G V + +     FF+   +   D++ +ALE+ K N + N      +E F+  
Sbjct: 66  VLDIGCGYGVVSVII---KSFFENTKIISSDVNERALELTKENLLKNNAIKNENEEFEIR 122

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
           +S  F ++   FDVI+SNPP
Sbjct: 123 KSFAFDNISEKFDVILSNPP 142


>gi|83645041|ref|YP_433476.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396]
 gi|123533712|sp|Q2SJX3|RSMC_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|83633084|gb|ABC29051.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396]
          Length = 342

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           SLP +  R   R+LD G G G +   L K  P       DI+  AL+ A   A  NGV  
Sbjct: 197 SLPELHGR---RLLDFGCGCGVIGATLKKRYPKASVELTDINLLALKSAARTAEANGVE- 252

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             +   SD  + V+   D I++NPP+ + V  D
Sbjct: 253 -LNVYASDGLAEVQPGVDAIITNPPFHQGVKQD 284


>gi|50365489|ref|YP_053914.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
           [Mesoplasma florum L1]
 gi|50364045|gb|AAT76030.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
           [Mesoplasma florum L1]
          Length = 240

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 4/83 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K  + +I+D GT    + L + K +   K VGV+I  KA E+A  N   N ++E+ + + 
Sbjct: 38  KSSIKKIVDFGTNNAVIPLIVSKYTNA-KIVGVEIQTKAAELAIENIELNKLTEQVEIVN 96

Query: 155 SD---WFSSVEGLFDVIVSNPPY 174
           SD   +   +   FD ++ NPP+
Sbjct: 97  SDIKTYAKEMANKFDAVICNPPF 119


>gi|313498783|gb|ADR60149.1| Methyltransferase small [Pseudomonas putida BIRD-1]
          Length = 317

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   +D+G G+G   L + + +   +   VDI+  AL     NA   GVS       SD 
Sbjct: 138 VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAALAGVSN-LSVEPSDL 196

Query: 158 FSSVEGLFDVIVSNPPYI 175
              + G FD+IV+NPPY+
Sbjct: 197 LDGISGTFDLIVANPPYM 214


>gi|312602204|ref|YP_004022049.1| hypothetical protein RBRH_00450 [Burkholderia rhizoxinica HKI 454]
 gi|312169518|emb|CBW76530.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 320

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 20/151 (13%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           +PE    +D   A      E  +   +LD+G G+G + +  L        VG+D++ +A 
Sbjct: 78  QPEQLFFMDYTCA------EDIEQASVLDIGVGSGVLSIFCLLNGAK-SCVGLDVNPRAK 130

Query: 135 EIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +A  NA+ N + + FD  +   SD F+SV +  FD I SNPP+  +      G+E    
Sbjct: 131 ILAGHNAILNHIDKNFDIREGNTSDIFASVKDKQFDFICSNPPFEPTP----PGIEY--- 183

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              ++    I G+     I   + +HL  DG
Sbjct: 184 --YVNSAADIYGMDFVEKILSNIDQHLTDDG 212


>gi|308472428|ref|XP_003098442.1| hypothetical protein CRE_06900 [Caenorhabditis remanei]
 gi|308269106|gb|EFP13059.1| hypothetical protein CRE_06900 [Caenorhabditis remanei]
          Length = 225

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 7/121 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           Y ++   + D +EP  +T LL+D A+   +  I  R+   +L++G G+G V   + +   
Sbjct: 8   YRLQAIRAHDVYEPAEDTFLLID-AIEKDIKEIRSREPQLVLEIGCGSGVVSTFVNQALG 66

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176
                +  D++  AL++    A  N +  + D +++D F+ +E L    DV++ NPPY+ 
Sbjct: 67  GNVTSMATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124

Query: 177 S 177
           +
Sbjct: 125 T 125


>gi|91772906|ref|YP_565598.1| putative methylase [Methanococcoides burtonii DSM 6242]
 gi|91711921|gb|ABE51848.1| N5-glutamine methyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 202

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 30/185 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +  + L  + ++P  ++ LL D A+  +      +D + +L++G GTG V  A+L+ +
Sbjct: 6   YRDADIELDENVYDPAEDSYLLADVAIDVA------QDGMHVLEVGAGTGFVS-AVLQTN 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                V  +IS  A E AK N+V    ++ F    SD        FD+I+ NPPY+ +  
Sbjct: 59  VDVDLVATEISPFAAECAKRNSVEVIRADMFGCFGSDT------KFDLILFNPPYLPTAE 112

Query: 180 VDCLGLEVRDFDPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                      D +I      + DGGIDG        +    +L+  G+  V I     +
Sbjct: 113 -----------DEKIPGWLNYAFDGGIDGREAVDRFLEEFPPYLSDGGIILVLISSLTGI 161

Query: 234 DVVRI 238
           D V++
Sbjct: 162 DKVKM 166


>gi|15644412|ref|NP_229464.1| hypothetical protein TM1664 [Thermotoga maritima MSB8]
 gi|4982239|gb|AAD36731.1|AE001808_6 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 210

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 8/102 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           ++LDLG G G + + L KE P  +    DI+ +A+E AK NA  + V    R+  L   W
Sbjct: 63  KVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINAKDHNVEVDIRWGNLYEPW 122

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                  FD+IV NPP +    V    +E+    P    +GG
Sbjct: 123 EDM---KFDMIVCNPPIVAGKKV---WMEIVKSAPEFLEEGG 158


>gi|333027280|ref|ZP_08455344.1| putative methyltransferase [Streptomyces sp. Tu6071]
 gi|332747132|gb|EGJ77573.1| putative methyltransferase [Streptomyces sp. Tu6071]
          Length = 232

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 9/117 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+GA  LALL      +    D+S +A+  A+ NA   G  +R   L+ D    
Sbjct: 45  VLDLCTGSGA--LALLAARRGARVCATDLSWRAVVSARINAARAG--QRVRVLRGDLSGP 100

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           V G  FD++VSNPPY+            R     ++ D G  G    R + D V  H
Sbjct: 101 VRGQRFDLVVSNPPYVPDPAARTGPRRGRSHAASLAWDAGPGG----RHLVDRVCAH 153


>gi|315655231|ref|ZP_07908132.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333]
 gi|315490486|gb|EFU80110.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333]
          Length = 214

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F++
Sbjct: 73  LVDVGCGWGPLALTLAVERPSAQVYAVDVNTRALELTRANATANGLHNIQVLSEADAFAT 132

Query: 161 V-EGLFDVIVSNPP 173
           +     DVI SNPP
Sbjct: 133 LGPNSVDVIWSNPP 146


>gi|167898474|ref|ZP_02485875.1| hypothetical protein Bpse7_32366 [Burkholderia pseudomallei 7894]
 gi|167906825|ref|ZP_02494030.1| hypothetical protein BpseN_31645 [Burkholderia pseudomallei NCTC
           13177]
 gi|237507795|ref|ZP_04520510.1| methyltransferase family protein [Burkholderia pseudomallei
           MSHR346]
 gi|254183698|ref|ZP_04890290.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|254193485|ref|ZP_04899919.1| conserved domain protein [Burkholderia pseudomallei S13]
 gi|254301833|ref|ZP_04969276.1| conserved domain protein [Burkholderia pseudomallei 406e]
 gi|157811688|gb|EDO88858.1| conserved domain protein [Burkholderia pseudomallei 406e]
 gi|169650238|gb|EDS82931.1| conserved domain protein [Burkholderia pseudomallei S13]
 gi|184214231|gb|EDU11274.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|235000000|gb|EEP49424.1| methyltransferase family protein [Burkholderia pseudomallei
           MSHR346]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|257466576|ref|ZP_05630887.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917731|ref|ZP_07913971.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691606|gb|EFS28441.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 242

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 8/100 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           +DS L     +I K+   +ILDLGTG  A+ L L LK +   +  G++I   + ++A  N
Sbjct: 27  LDSLLISEFIKINKQSK-KILDLGTGNAAIPLFLSLKTTA--QIYGLEIQKVSYDLAIKN 83

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
              N + E+   L  D  +  E      FD++VSNPP+ E
Sbjct: 84  IALNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFE 123


>gi|167915178|ref|ZP_02502269.1| hypothetical protein Bpse112_32176 [Burkholderia pseudomallei 112]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|53722346|ref|YP_111331.1| hypothetical protein BPSS1321 [Burkholderia pseudomallei K96243]
 gi|52212760|emb|CAH38792.1| hypothetical protein BPSS1321 [Burkholderia pseudomallei K96243]
          Length = 366

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 176 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 222

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 223 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 282

Query: 191 D 191
           D
Sbjct: 283 D 283


>gi|325967616|ref|YP_004243808.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta
           moutnovskia 768-28]
 gi|323706819|gb|ADY00306.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta
           moutnovskia 768-28]
          Length = 198

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + +   K +P  K V VDI+  A+++   N   N VS   +   SD +S+
Sbjct: 60  ILDMGCGYGVLGIVAAKLAPRGKVVMVDINKLAVKLTAINIKINRVSNA-EVRLSDLYSA 118

Query: 161 VEG-LFDVIVSNPP 173
           V+G +F+ I+SNPP
Sbjct: 119 VQGEMFNTIISNPP 132


>gi|319399710|gb|EFV87959.1| uncharacterized protein ybxB [Staphylococcus epidermidis FRI909]
          Length = 202

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+ + L    P   K     I D+G G G + LA+ K SP  +   +DI+ +AL +A
Sbjct: 45  SDLLIKTFLKEHPPGPSKT----IADVGCGYGPIGLAIGKASPHHQITMLDINNRALALA 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + N   N V +    ++S+  S+V    FD I++NPP
Sbjct: 101 EMNKTKNQV-DNVTIMESNCLSAVNHQCFDYILTNPP 136


>gi|284053249|ref|ZP_06383459.1| UbiE/COQ5 methyltransferase [Arthrospira platensis str. Paraca]
          Length = 220

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR E      +LD GTGT  + + + K+ P ++ +G+D+S   L+I + N    GVS +
Sbjct: 39  LPRSEGM----VLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNIKAAGVSSQ 94

Query: 150 FD--TLQSDWFSSVEGLFDVIVSN 171
            +   + +     ++G FD+++SN
Sbjct: 95  VELALVDAKKLPYIDGQFDLVISN 118


>gi|120406733|ref|YP_956562.1| putative methylase [Mycobacterium vanbaalenii PYR-1]
 gi|119959551|gb|ABM16556.1| putative methylase [Mycobacterium vanbaalenii PYR-1]
          Length = 235

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 14/139 (10%)

Query: 67  LSSDTFEPRPETELLVDSALAFS-LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           ++ + + P+ +++LLV++A A   LP        R+ DL TG+G V L         +  
Sbjct: 19  VAVEVYPPQEDSQLLVEAATAAGVLPG------ARVADLCTGSGVVALGAAASG-AAEVT 71

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
             DI  KA++  + +AV  G     D  +  W  +VE G +DV+++NPPY+   + D  G
Sbjct: 72  AFDICPKAVQRTRQDAVAAGAD--VDVHRGSWARAVEFGPYDVVLANPPYVP--VPDADG 127

Query: 185 LEV-RDFDPRISLDGGIDG 202
             +     P  + D G DG
Sbjct: 128 ETIPAAAGPSRAWDAGPDG 146


>gi|187779296|ref|ZP_02995769.1| hypothetical protein CLOSPO_02892 [Clostridium sporogenes ATCC
           15579]
 gi|187772921|gb|EDU36723.1| hypothetical protein CLOSPO_02892 [Clostridium sporogenes ATCC
           15579]
          Length = 529

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 24/152 (15%)

Query: 93  IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D +  + D   G+G++ L + +E P     K  G +++     +A+ N + +G+S 
Sbjct: 221 VEKSDELFNVYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHGISY 280

Query: 148 -----ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                   DTL+SDW      +G+     FD +V+NPPY      D   L+    DPR S
Sbjct: 281 NNMVLSNADTLESDWPDGPDAKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336

Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225
             G +   S   Y  I   +  HLNK G  ++
Sbjct: 337 EYGKLAPASKADYAFILHSI-YHLNKTGTMAI 367


>gi|77919821|ref|YP_357636.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380]
 gi|77545904|gb|ABA89466.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 249

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V RI DLG G+G + L L + S   + VGV+I  ++ + A+ + + NGV +R + ++ D 
Sbjct: 48  VERICDLGCGSGVIPLILSRTSDARRIVGVEIQEESADRARRSVLLNGVQDRVEIVRRDV 107

Query: 158 FSSVEGLF----DVIVSNPPY 174
            S  E L      V+++NPPY
Sbjct: 108 RSVREVLAAESCQVVMTNPPY 128


>gi|307329693|ref|ZP_07608850.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
 gi|306884633|gb|EFN15662.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
          Length = 258

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 36/75 (48%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P    L D ++A  L R    +  R LDLG G GA    LL   P+    GVDI   ALE
Sbjct: 25  PIAAPLADESVARLLDRAVADEADRALDLGCGGGAWLRRLLVRYPWMHAEGVDIHTAALE 84

Query: 136 IAKSNAVTNGVSERF 150
            A+  A   GV++R 
Sbjct: 85  QAREGAEEAGVADRL 99


>gi|217419288|ref|ZP_03450795.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|217398592|gb|EEC38607.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|167828420|ref|ZP_02459891.1| hypothetical protein Bpseu9_32354 [Burkholderia pseudomallei 9]
 gi|167923014|ref|ZP_02510105.1| hypothetical protein BpseBC_30947 [Burkholderia pseudomallei
           BCC215]
 gi|226198487|ref|ZP_03794054.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|225929410|gb|EEH25430.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
          Length = 329

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|159899618|ref|YP_001545865.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892657|gb|ABX05737.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 365

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A A  L  +  +   R+LDLG G G + + L +         +D +  A+E  K N 
Sbjct: 207 LDPASAMLLDAVHIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMVAIEATKRNL 266

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
            TN ++ R   L SD   +V G  FD++VSNPP+
Sbjct: 267 QTNQLTGR--VLASDGIQAVNGEQFDLVVSNPPF 298


>gi|312212448|emb|CBX92531.1| similar to modification methylase [Leptosphaeria maculans]
          Length = 340

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 15/118 (12%)

Query: 68  SSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           S+D+    P+T L V    SAL     R   +    I+D+  G+GA  + L ++ P  + 
Sbjct: 124 SADSVFFGPDTYLFVPFLGSAL-----RHLSQPPTSIIDVCCGSGAGAIHLARQYPQAQV 178

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIES 177
           +G+D++  ALE+   NA    V+   D +QS+ F +V         D+IVSNPPYI S
Sbjct: 179 LGLDLNPCALELGAVNAQLADVN--VDFMQSNLFHAVPHALTSNGIDLIVSNPPYIAS 234


>gi|301058927|ref|ZP_07199896.1| methyltransferase small domain protein [delta proteobacterium
           NaphS2]
 gi|300446923|gb|EFK10719.1| methyltransferase small domain protein [delta proteobacterium
           NaphS2]
          Length = 242

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++ +DVV  +DLGTG G + L LL   P      ++I  + +  A  NA
Sbjct: 41  IDAVLLSQFAAVQPQDVV--IDLGTGCGVIPLILLLTKPLGHVFALEIQPELVRQAWRNA 98

Query: 142 VTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174
             NG+ +  D ++ D+       G  ++++ NPPY
Sbjct: 99  RLNGLEKMMDVVRGDFCRPPLASGSANLVICNPPY 133


>gi|226304757|ref|YP_002764715.1| methyltransferase [Rhodococcus erythropolis PR4]
 gi|226183872|dbj|BAH31976.1| putative methyltransferase [Rhodococcus erythropolis PR4]
          Length = 232

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 9/111 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL D AL F    +  R   R+LDL TGTGA+ +A          V VDIS 
Sbjct: 18  YRPQHDTSLLAD-ALLFE--HLTARS--RVLDLCTGTGALAVAASAAG-AGHVVAVDISR 71

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +A   A+ N + NG     D+ + D   +V G LFD+++SNPPY+ ++  D
Sbjct: 72  RACANARLNGILNGTL--IDSRRGDLTEAVHGELFDLVISNPPYVPALADD 120


>gi|332969350|gb|EGK08375.1| methyltransferase domain protein [Kingella kingae ATCC 23330]
          Length = 367

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+GTG+G + + L K     +    D + +A+E A+ N    G + R + +Q+D F+  
Sbjct: 193 MDVGTGSGVLAVVLAKAG-VAQVWATDNNPRAIECARQNVARLGYAARIEIVQTDLFA-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +   D+IV NPP++ +       +E   +D R ++            + +G + HLN  G
Sbjct: 250 DECVDLIVCNPPWLPARPTS--AIETALYDERHAM---------LHALLNGAAAHLNAGG 298


>gi|67642262|ref|ZP_00441021.1| methyltransferase family protein [Burkholderia mallei GB8 horse 4]
 gi|77358785|ref|YP_338422.1| hypothetical protein BMAA0956 [Burkholderia mallei ATCC 23344]
 gi|66967583|gb|AAY59140.1| conserved domain protein [Burkholderia mallei ATCC 23344]
 gi|238523372|gb|EEP86811.1| methyltransferase family protein [Burkholderia mallei GB8 horse 4]
          Length = 342

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|313886340|ref|ZP_07820065.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924209|gb|EFR34993.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 244

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +   +R   L  D  +
Sbjct: 40  QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFYRSPYGDRLTALSCDITA 99

Query: 160 SVEGL----FDVIVSNPPYIESV 178
               L    +D+I+SNPPY + +
Sbjct: 100 PELALPPRTYDLIISNPPYYDGL 122


>gi|212637183|ref|YP_002313708.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
 gi|226712999|sp|B8CUC9|RSMC_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|212558667|gb|ACJ31121.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
          Length = 342

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T+LL+++     LP+++      +LD G G G +  ALL   P      VDI+  AL   
Sbjct: 191 TKLLLEN-----LPKMQGN----VLDFGCGAGVIAAALLTAQPKLTLDCVDINAMALTSC 241

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 NG+S   +   SD  +   G +D I+SNPP+
Sbjct: 242 DLTMQANGLSA--NIFASDGMAQTSGHYDGIISNPPF 276


>gi|261250314|ref|ZP_05942890.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891]
 gi|260939430|gb|EEX95416.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891]
          Length = 215

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D  L  S  ++E      +LD+GTGTG + L   + +       ++I   AL+ A+SN 
Sbjct: 5   TDGVLLGSWAKLEASK--NLLDIGTGTGLLSLMCAQRNASLTIDAIEIDSNALQAAQSNF 62

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
             +  S+R      D  +    G FD I+ NPPY  S
Sbjct: 63  AQSPWSDRIQLHSGDVLTRPFHGKFDTIICNPPYFNS 99


>gi|268318934|ref|YP_003292590.1| hypothetical protein FI9785_440 [Lactobacillus johnsonii FI9785]
 gi|262397309|emb|CAX66323.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 203

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           Q +F  N   +  +H   + I    D  +++ T  +  F     ++L VD      +  +
Sbjct: 6   QMYFAANPDAKHDEHLVDYHI----DDIDLKFTTDAGVF-----SKLRVDYGSGVLIKAM 56

Query: 94  EKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +  D  +  ILD+GTG G + L   K  P  +   VD++ +AL++AK NA  N + +  +
Sbjct: 57  KNVDFPKDGILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLAKRNAQFNRI-DNVN 115

Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173
             QSD +  V   + +I++NPP
Sbjct: 116 IYQSDIYEQVNKKYGLIITNPP 137


>gi|296108940|ref|YP_003615889.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME]
 gi|295433754|gb|ADG12925.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME]
          Length = 201

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 15/123 (12%)

Query: 62  NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVV--RILDLGTGTG--AVCLA 114
            + + L S    P P+ EL    +  +LA  L  + ++D +   +LDLG GTG  A+   
Sbjct: 5   KLEMLLDSLKPHPNPKVELEQYTISGSLASELLFLAQKDFIGKTVLDLGCGTGRLAIGAK 64

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSN 171
           LL      + VG+DI  +++E+AK NA   GV   F  + +D  +    +FD   V++ N
Sbjct: 65  LLGAK---RAVGIDIDRESIEVAKENAKALGVDVEF--ICNDVRNIKREMFDEEVVVIQN 119

Query: 172 PPY 174
           PP+
Sbjct: 120 PPF 122


>gi|238915995|ref|YP_002929512.1| hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750]
 gi|238871355|gb|ACR71065.1| Hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750]
          Length = 239

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +     K+D  R+LD+GTG G + + +  ++P      ++I   + ++A+ N 
Sbjct: 27  MDAVLLSTYAMAGKKD--RVLDMGTGNGIIPVLMQSKNPGSTYSALEIQEGSAQLARRNV 84

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             N + +R   ++ D   +     E  F+V+ SNPPY+
Sbjct: 85  ELNHLEDRISVVKGDIKEASTIFGEASFNVVTSNPPYM 122


>gi|254381772|ref|ZP_04997136.1| methyltransferase [Streptomyces sp. Mg1]
 gi|194340681|gb|EDX21647.1| methyltransferase [Streptomyces sp. Mg1]
          Length = 218

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 21/135 (15%)

Query: 72  FEPRPETELLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           + P+ +T LL ++     L R +   +RDV   L++GTGTGA  LAL       +   VD
Sbjct: 12  YRPQADTRLLAEA-----LTREDFGSRRDV---LEIGTGTGA--LALHAAGRGARVTAVD 61

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           ++  A+  A+ NA+   V  R   L  D+ +  EG  +D++V+NPPY+ +          
Sbjct: 62  VAWPAVVTARLNALRQRVPLRV--LHGDFAARTEGRRYDLVVANPPYVPAPATRPPA--- 116

Query: 188 RDFDPRISLDGGIDG 202
               P  + D G DG
Sbjct: 117 --HGPERAWDAGPDG 129


>gi|307566089|ref|ZP_07628547.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A]
 gi|307345277|gb|EFN90656.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A]
          Length = 234

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQSD 156
           ILD+GTGTG + L + +  P  K  G+DI   AL+ A  N  ++  ++R      +LQ D
Sbjct: 36  ILDVGTGTGLIALMMAQRFPHSKVTGIDIDENALKDAVQNIKSSKFNDRIRIEPISLQ-D 94

Query: 157 WFSSVEGLFDVIVSNPPY 174
              +    FD IV NPP+
Sbjct: 95  LCKTQNNTFDAIVCNPPF 112


>gi|304398628|ref|ZP_07380500.1| methyltransferase small [Pantoea sp. aB]
 gi|304353839|gb|EFM18214.1| methyltransferase small [Pantoea sp. aB]
          Length = 249

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+G+G+G + L L + +P    +  V++  +A   A+ N   +   ER    Q D
Sbjct: 49  VRRILDIGSGSGLIALMLAQRTPSPVEIDAVELEPEAAGQAQENVQQSPWPERIRVHQQD 108

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W    +  + +IVSNPPY
Sbjct: 109 IAGWAEQCDKRYSLIVSNPPY 129


>gi|302851831|ref|XP_002957438.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f.
           nagariensis]
 gi|300257242|gb|EFJ41493.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f.
           nagariensis]
          Length = 451

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 29/202 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           ++   L++      PRPETE+   LV +A++   P +         DLGTG+GA+ +A  
Sbjct: 187 WHKYVLSVGPGVLVPRPETEIFPELVRTAIS-ERPYLA---AAPWADLGTGSGAIAIAAA 242

Query: 117 KE----SPFFKGVGVDISCKALEIAKSNA--------------VTNGVSERFDTLQSDWF 158
            E    +   +   VD+S +A+  A  NA                 G       +Q  WF
Sbjct: 243 DELRRVTLSVEVWAVDLSPRAVAYATFNAQLCLPSPPSTGAGGSGGGGRPLVRVVQGSWF 302

Query: 159 SSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVS 214
             +    G    +++NPPYI    +  L  EVR  +PR +LDGG   GL     +    +
Sbjct: 303 EPLRHLRGRLGGVLTNPPYIPRAQMSGLQAEVRLHEPRGALDGGEGPGLDSLEILCSDAA 362

Query: 215 RHLNKDGLCSVEIGYNQKVDVV 236
             +   GL ++E     + ++V
Sbjct: 363 AMMLPGGLIALETAGGDQAELV 384


>gi|291570492|dbj|BAI92764.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 220

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR E      +LD GTGT  + + + K+ P ++ +G+D+S   L+I + N    GVS +
Sbjct: 39  LPRSEGM----VLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNIKAAGVSSQ 94

Query: 150 FD--TLQSDWFSSVEGLFDVIVSN 171
            +   + +     ++G FD+++SN
Sbjct: 95  VELALVDAKKLPYIDGQFDLVISN 118


>gi|149197630|ref|ZP_01874680.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
 gi|149139200|gb|EDM27603.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
          Length = 378

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKES----PFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ILDLG G G + LAL K      P   G  V VD + +++E  K N   NG  E  + + 
Sbjct: 241 ILDLGCGAGLIGLALAKRQNDAKPDHGGSVVLVDSNIRSIECCKKNIEINGF-ENCEAIA 299

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
           SD + + E  FD+IV NPPY
Sbjct: 300 SDLYET-EKTFDLIVGNPPY 318


>gi|149202963|ref|ZP_01879934.1| methyltransferase small [Roseovarius sp. TM1035]
 gi|149143509|gb|EDM31545.1| methyltransferase small [Roseovarius sp. TM1035]
          Length = 235

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA S+P    R    +LDLG G+G   L +    P     G++I      +A+ N+ +NG
Sbjct: 17  LAASVP---ARAGQSLLDLGCGSGIAALCVASRVPGVTLAGLEIQAAYAALARQNSASNG 73

Query: 146 VS-ERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
           ++ E F+   +D  +S+    FD +++NPPY E
Sbjct: 74  IALEVFEGDIADMPASLRRRQFDHVIANPPYFE 106


>gi|121597486|ref|YP_990033.1| hypothetical protein BMASAVP1_0423 [Burkholderia mallei SAVP1]
 gi|124381215|ref|YP_001024046.1| hypothetical protein BMA10229_0221 [Burkholderia mallei NCTC 10229]
 gi|126446817|ref|YP_001078565.1| hypothetical protein BMA10247_A1380 [Burkholderia mallei NCTC
           10247]
 gi|126457825|ref|YP_001075825.1| hypothetical protein BURPS1106A_A1791 [Burkholderia pseudomallei
           1106a]
 gi|166999597|ref|ZP_02265434.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|167723893|ref|ZP_02407129.1| hypothetical protein BpseD_33055 [Burkholderia pseudomallei DM98]
 gi|167820039|ref|ZP_02451719.1| hypothetical protein Bpse9_33232 [Burkholderia pseudomallei 91]
 gi|167849873|ref|ZP_02475381.1| hypothetical protein BpseB_31800 [Burkholderia pseudomallei B7210]
 gi|254191177|ref|ZP_04897682.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254262545|ref|ZP_04953410.1| conserved domain protein [Burkholderia pseudomallei 1710a]
 gi|254356686|ref|ZP_04972961.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|121225284|gb|ABM48815.1| conserved domain protein [Burkholderia mallei SAVP1]
 gi|124289235|gb|ABM98504.1| conserved domain protein [Burkholderia mallei NCTC 10229]
 gi|126231593|gb|ABN95006.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|126239671|gb|ABO02783.1| conserved domain protein [Burkholderia mallei NCTC 10247]
 gi|148025713|gb|EDK83836.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|157938850|gb|EDO94520.1| conserved domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|243064426|gb|EES46612.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|254213547|gb|EET02932.1| conserved domain protein [Burkholderia pseudomallei 1710a]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|296313663|ref|ZP_06863604.1| methyltransferase domain protein [Neisseria polysaccharea ATCC
           43768]
 gi|296839805|gb|EFH23743.1| methyltransferase domain protein [Neisseria polysaccharea ATCC
           43768]
          Length = 367

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + +A+  A++N    G  ++ +  ++D F   
Sbjct: 193 FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEICETDLFP-- 249

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 250 EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM------LAAFLRDA---PKHLNPDG 298


>gi|227488744|ref|ZP_03919060.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542260|ref|ZP_03972309.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227091166|gb|EEI26478.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182089|gb|EEI63061.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 525

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I    V R+LDLGTG G + L+ +  +      G DIS +AL++A+      G       
Sbjct: 168 IPTTPVARVLDLGTGAGTLLLSQVGHARELW--GTDISQRALDLAELTLAGAGAH----L 221

Query: 153 LQSDWFSSVEG-LFDVIVSNPPYI 175
           ++  WF  +E   FD I++NPP++
Sbjct: 222 VKGSWFEPIENERFDRIIANPPFV 245


>gi|146278503|ref|YP_001168662.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025]
 gi|145556744|gb|ABP71357.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025]
          Length = 271

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L+LG G G   L L    P  +  G+++     E+A+ NA  NGVS   + 
Sbjct: 57  VPARPGQSVLELGCGAGVASLCLAARVPGLRLAGLEVQPAYAELARVNAARNGVS--LEV 114

Query: 153 LQSDWFSSVEGL---FDVIVSNPPYIES 177
           ++ D  +    L   FD +++NPPY  +
Sbjct: 115 VEGDLAAMPPVLRRSFDHVIANPPYYPA 142


>gi|317153229|ref|YP_004121277.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943480|gb|ADU62531.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2]
          Length = 291

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 28/151 (18%)

Query: 47  KHESIHRILGWRDFYNV-----RLTLSSDTFEPRPE---TELLVDSALAF---------- 88
           + ES +  + W+DF+N        T+     E   E   T ++++  +AF          
Sbjct: 72  ERESENWAMAWKDFFNPVNCGETFTILPPWLEDGSENGTTHIVIEPKMAFGTGHHSTTSL 131

Query: 89  ---SLPRIEKRDVVR----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
              ++  + K  V+      LDLGTG+G + + L K      G+G+DI  +A+E A+ NA
Sbjct: 132 CLATIGTMAKDGVIEPGQSFLDLGTGSGILGIGLCKLG--LTGIGLDIDPQAIECARENA 189

Query: 142 VTNGVSERFD-TLQSDWFSSVEGLFDVIVSN 171
             N V++     + S  F   E +F+++V+N
Sbjct: 190 EANAVAQSMRCAVGSIDFLEPEAVFNIVVAN 220


>gi|255319320|ref|ZP_05360537.1| modification methylase, HemK family [Acinetobacter radioresistens
           SK82]
 gi|262379764|ref|ZP_06072920.1| modification methylase [Acinetobacter radioresistens SH164]
 gi|255303713|gb|EET82913.1| modification methylase, HemK family [Acinetobacter radioresistens
           SK82]
 gi|262299221|gb|EEY87134.1| modification methylase [Acinetobacter radioresistens SH164]
          Length = 319

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           + ++  V  IL++G+GT A  +   K+ +P  +   VDI+  AL +++ +A  +G+ E+F
Sbjct: 131 KQQQFSVSSILEMGSGTAATAILTTKKFNPQPELTLVDINPYALLLSELHAEFSGI-EKF 189

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYI 175
             + S  +  +   +D+I++NPPY+
Sbjct: 190 RAVNSHLYQEIHEQYDLIIANPPYL 214


>gi|332982765|ref|YP_004464206.1| RNA methylase [Mahella australiensis 50-1 BON]
 gi|332700443|gb|AEE97384.1| RNA methylase [Mahella australiensis 50-1 BON]
          Length = 252

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  RI+  D+V   DLGTG+G + L L  ++   K  G++I  +  ++A+ + 
Sbjct: 32  IDAVLLANFARIKPGDIV--ADLGTGSGVIPLLLSCKTAASKIYGLEIQHEMADMAQRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
             N +  R D ++ D   + +     L D ++SNPPY
Sbjct: 90  RLNDLESRVDIIEGDIRKAGDIIGMSLVDAVISNPPY 126


>gi|167742867|ref|ZP_02415641.1| hypothetical protein Bpse14_32632 [Burkholderia pseudomallei 14]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|149909422|ref|ZP_01898077.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36]
 gi|149807532|gb|EDM67481.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36]
          Length = 344

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     L  + K+   R+LDLG G G +   + K  P  K    D+S  A++ ++   
Sbjct: 189 LDTGSKILLNNLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQLTL 248

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             N ++ +     SD +S + G FD I+SNPP+
Sbjct: 249 AANELAGQ--AYLSDVYSDISGKFDYIISNPPF 279


>gi|33151458|ref|NP_872811.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus ducreyi
           35000HP]
 gi|81423896|sp|Q7VP87|RSMC_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|33147678|gb|AAP95200.1| putative ribosomal RNA small subunit methyltransferase C
           [Haemophilus ducreyi 35000HP]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 2/97 (2%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TEL   S L  S    + R    +LDLG G G +   L +  P       DI   A+  A
Sbjct: 170 TELDAGSQLLLSSFTNQDRLTGNVLDLGCGAGVIGAYLKQRFPAISLTMSDIHSMAIHSA 229

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++    N ++     + SD FS +   FD+IVSNPP+
Sbjct: 230 QATLAKNKLTG--TVIASDVFSHINDRFDLIVSNPPF 264


>gi|302669461|ref|YP_003829421.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
 gi|302393934|gb|ADL32839.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
          Length = 214

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG + + +  ++   + +G++I   + E+A  + + N +  R   +Q D   
Sbjct: 17  RCLDLGTGTGIIPILMAAKTNARELIGLEIQEASAEMANRSVLLNDLEARVKIVQGDIKE 76

Query: 160 SVE----GLFDVIVSNPPYI 175
           + +      FDV+ SNPPY+
Sbjct: 77  ADQLFEAASFDVVTSNPPYM 96


>gi|255023945|ref|ZP_05295931.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes FSL J1-208]
          Length = 141

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 4/102 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GLS  ++  + +  L+            R L  E +  IL    FY     ++ D   PR
Sbjct: 34  GLSRSELWTEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPR 93

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           PETE LV  A  F    ++K  V  +LD+ TG+G + +A  K
Sbjct: 94  PETEELVACAEDF----LKKHPVKNVLDVCTGSGIIAIAXQK 131


>gi|307594946|ref|YP_003901263.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550147|gb|ADN50212.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 199

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ + S+ + P  E        L + +        +RI+D+G+GTG + LA L+E    
Sbjct: 1   MRIKVLSNIYPP-AEDSWQTAELLRWVVSNYIGNKALRIIDVGSGTGILTLAALEEVVSR 59

Query: 123 KGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPYI 175
            G      +D    A    + N V NG+ +  D + ++    V+  F  D+IVSNPPY+
Sbjct: 60  GGTAWVLSIDHDINASVSTRMNLVDNGLYQYADVVTANLLDPVKAEFHVDIIVSNPPYL 118


>gi|311278492|ref|YP_003940723.1| methyltransferase small [Enterobacter cloacae SCF1]
 gi|308747687|gb|ADO47439.1| methyltransferase small [Enterobacter cloacae SCF1]
          Length = 245

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +     +  V++   A   A  N   +  ++R    Q+D
Sbjct: 45  VNRILDIGTGSGLLALMLAQRTEASVTLDAVELDVDAAAQAAENVQESPWAQRIAVHQAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     +D+IVSNPPY E   V+C
Sbjct: 105 VRDWIAGQNSRYDLIVSNPPYYEQG-VEC 132


>gi|76818669|ref|YP_335500.1| hypothetical protein BURPS1710b_A0341 [Burkholderia pseudomallei
           1710b]
 gi|76583142|gb|ABA52616.1| hypothetical protein BURPS1710b_A0341 [Burkholderia pseudomallei
           1710b]
          Length = 414

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 224 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 270

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 271 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 330

Query: 191 D 191
           D
Sbjct: 331 D 331


>gi|38605120|sp|O86951|PRMA_THENE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
          Length = 264

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++D+G GTG + +   K    +  + VD+  +A+E+AK N   N V       +SD  S
Sbjct: 132 RVVDVGCGTGILAIVAKKLGASY-VLAVDVDEQAVEVAKENVQKNSVD--VTVKRSDLLS 188

Query: 160 SVEGLFDVIVSN 171
            VEG+FD++VSN
Sbjct: 189 EVEGVFDLVVSN 200


>gi|320006881|gb|ADW01731.1| methylase [Streptomyces flavogriseus ATCC 33331]
          Length = 227

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+GA  LAL       +   VDI+ +A+  A+ NA+ +    R    +SD  S+
Sbjct: 45  VLDVGTGSGA--LALHAARLGARVTAVDIARRAVATARLNALLH--RRRITVQRSDLLSA 100

Query: 161 VEGL-FDVIVSNPPYIESVI 179
           + G  +D+++ NPPY+ S +
Sbjct: 101 LPGRSYDLVICNPPYVPSPL 120


>gi|189465685|ref|ZP_03014470.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM
           17393]
 gi|189433949|gb|EDV02934.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM
           17393]
          Length = 235

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-F 158
           +ILD+GTGTG + L L + +P  +   ++I   A   A+ N   +  + R   + +D+  
Sbjct: 40  QILDIGTGTGLIALMLAQRNPLSQVTAIEIDEAAATQAEENIARSPWANRIKVICNDFSL 99

Query: 159 SSVEGLFDVIVSNPPY 174
              +  + +IVSNPPY
Sbjct: 100 FQTDNKYHLIVSNPPY 115


>gi|330918091|ref|XP_003298081.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1]
 gi|311328908|gb|EFQ93816.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1]
          Length = 441

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 37/133 (27%)

Query: 99  VRILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIA------------- 137
           +R+LDL TGTG  C+ LL +            + +GVDIS KA+ +A             
Sbjct: 124 LRVLDLCTGTG--CIPLLFKHQLSSARNDISLRLLGVDISLKAIRLASHNLQRLQKDGQL 181

Query: 138 ---------KSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIE-SVIVDCL 183
                    ++N +TN   E+ + + S      ++++   +D+++SNPPYI  S      
Sbjct: 182 SVQGNFDFLRANVMTNPFVEQTEGIPSVKAALNYAAMPSFWDILISNPPYISPSEFWKTT 241

Query: 184 GLEVRDFDPRISL 196
              VR F+P+++L
Sbjct: 242 TRSVRGFEPKLAL 254


>gi|262395213|ref|YP_003287067.1| putative O-methyltransferase [Vibrio sp. Ex25]
 gi|262338807|gb|ACY52602.1| predicted O-methyltransferase [Vibrio sp. Ex25]
          Length = 215

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+  +  +ILD+GTGTG + L   +     +   VDI   A+E A+ N V +  S R   
Sbjct: 14  IQSPNNAQILDIGTGTGLLALMCAQRFTEAQITAVDIELTAIEAAQKNVVQSPWSARVCV 73

Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177
             SD    +    F  I+ NPPY  S
Sbjct: 74  HHSDILDFTPTHPFQRIICNPPYFNS 99


>gi|3282093|emb|CAA07516.1| hypothetical protein [Thermotoga neapolitana]
          Length = 258

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++D+G GTG + +   K    +  + VD+  +A+E+AK N   N V       +SD  S
Sbjct: 126 RVVDVGCGTGILAIVAKKLGASY-VLAVDVDEQAVEVAKENVQKNSVD--VTVKRSDLLS 182

Query: 160 SVEGLFDVIVSN 171
            VEG+FD++VSN
Sbjct: 183 EVEGVFDLVVSN 194


>gi|259047254|ref|ZP_05737655.1| methyltransferase domain protein [Granulicatella adiacens ATCC
           49175]
 gi|259036304|gb|EEW37559.1| methyltransferase domain protein [Granulicatella adiacens ATCC
           49175]
          Length = 206

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + L+  K  P      VD++ +ALE+A+ NA  NG+ E     +S  + 
Sbjct: 64  KLLDVGCGYGPMGLSFAKAYPKMHVEMVDVNERALELARRNAKANGI-ENVLIHESSIYD 122

Query: 160 SVEGL-FDVIVSNPP 173
            +    + VI+SNPP
Sbjct: 123 EINAKDYSVIISNPP 137


>gi|294618341|ref|ZP_06697922.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1679]
 gi|291595435|gb|EFF26747.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1679]
          Length = 210

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 55  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144


>gi|330952368|gb|EGH52628.1| hypothetical protein PSYCIT7_13539 [Pseudomonas syringae Cit 7]
          Length = 166

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            VDI+ KAL  A++NA   G+ +  +   SD  S + G FD+IV+NPPY++
Sbjct: 14  AVDINPKALHFAQTNAAVAGL-KNMECCHSDILSGLNGNFDLIVANPPYMK 63


>gi|323127350|gb|ADX24647.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 210

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + ++L K     +   VDI+ +A+++A+ NA  N V       QS+ + +
Sbjct: 72  VLDLGCGYGPLGISLAKVQEV-EATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYEN 128

Query: 161 VEGLFDVIVSNPP 173
           V G F+ I+SNPP
Sbjct: 129 VRGSFNHIISNPP 141


>gi|187933312|ref|YP_001886270.1| type I restriction-modification system, M subunit [Clostridium
           botulinum B str. Eklund 17B]
 gi|187721465|gb|ACD22686.1| type I restriction-modification system, M subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 529

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 24/152 (15%)

Query: 93  IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D +  + D   G+G++ L + +E P     K  G +++     +A+ N + +G+S 
Sbjct: 221 VEKSDELFSVYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHGISY 280

Query: 148 -----ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                   DTL+SDW      +G+     FD +V+NPPY      D   L+    DPR S
Sbjct: 281 NNMVLSNADTLESDWPDGPDAKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336

Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225
             G +   S   Y  I   +  HLNK G  ++
Sbjct: 337 EYGKLAPASKADYAFILHSI-YHLNKTGTMAI 367


>gi|330832907|ref|YP_004401732.1| methyltransferase small [Streptococcus suis ST3]
 gi|329307130|gb|AEB81546.1| methyltransferase small [Streptococcus suis ST3]
          Length = 169

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+G G G + L L K    F  K   +DI+ +AL++A  NA  NGV  +    QS+ +
Sbjct: 34  VLDVGCGYGPIGLTLAK---VFNTKTTLIDINSRALDLATKNAERNGVIAKI--YQSNIY 88

Query: 159 SSVEGLFDVIVSNPP 173
            +V+  F+ IVSNPP
Sbjct: 89  ENVDETFNHIVSNPP 103


>gi|315446631|ref|YP_004079510.1| HemK-related methylase [Mycobacterium sp. Spyr1]
 gi|315264934|gb|ADU01676.1| HemK-related putative methylase [Mycobacterium sp. Spyr1]
          Length = 230

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 67  LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           L+ D + P+ ++ LL+D+ + A  +P        R+ DL TG+G + +A           
Sbjct: 13  LAVDVYPPQEDSHLLIDAMIEAGVVPG------ARVADLCTGSGVIAIAAAAAG-AASVT 65

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
             DI  KA++  +  A+  GV    D  +  W  +VE   FDV+++NPPY+    +D  G
Sbjct: 66  AFDICPKAVQRTREEALAAGV--EVDVHRGSWARAVEFRPFDVVLANPPYVPEAPMDDSG 123

Query: 185 LEVRDFDPRISLDGGIDG 202
           L      P  + D G DG
Sbjct: 124 LISATAGPSRAWDAGPDG 141


>gi|226327941|ref|ZP_03803459.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198]
 gi|225203645|gb|EEG85999.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198]
          Length = 123

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 3/88 (3%)

Query: 153 LQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +QSD F++ V   +D+IV+NPPY++   +  L  E +  +P ++L  GIDGL   R I  
Sbjct: 1   MQSDLFNALVPTPYDIIVTNPPYVDIEDMGDLPDEYQ-VEPELALASGIDGLDITRQILL 59

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               +L++ G+   E+G N  V ++  F
Sbjct: 60  KAPEYLSEKGILVCEVG-NSMVHLIEQF 86


>gi|167839956|ref|ZP_02466640.1| hypothetical protein Bpse38_25004 [Burkholderia thailandensis
           MSMB43]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQ 154
             A E AK  A  NG + R + L 
Sbjct: 186 ATATEQAKQAAEANGFAGRLEFLH 209


>gi|254362226|ref|ZP_04978341.1| possible methyltransferase [Mannheimia haemolytica PHL213]
 gi|153093798|gb|EDN74737.1| possible methyltransferase [Mannheimia haemolytica PHL213]
          Length = 235

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +D   ILDLG G+G V L L + +     +  +++   A + A  NA  +  + R   LQ
Sbjct: 35  KDCQNILDLGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQ 94

Query: 155 SDWFS-SVEGLFDVIVSNPPY 174
            D    + E  FD+IVSNPPY
Sbjct: 95  GDVMQQAFEQKFDLIVSNPPY 115


>gi|289565392|ref|ZP_06445842.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|294615414|ref|ZP_06695287.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1636]
 gi|289162882|gb|EFD10732.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291591788|gb|EFF23424.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1636]
          Length = 210

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 55  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144


>gi|332300278|ref|YP_004442199.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707]
 gi|332177341|gb|AEE13031.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707]
          Length = 244

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +   +R   L  D  +
Sbjct: 40  QVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRSPYGDRLTALSCDITA 99

Query: 160 SVEGL----FDVIVSNPPYIESV 178
               L    +D+I+SNPPY + +
Sbjct: 100 PELALPPRTYDLIISNPPYYDGL 122


>gi|309775480|ref|ZP_07670482.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916776|gb|EFP62514.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 220

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+AL      ++K +  R+LD+GT  GA+ LA  +  P     GVDI  +A+++A  N  
Sbjct: 28  DTALLAQFMTVKKGE--RVLDIGTNNGALLLAAQRYEPKHM-YGVDIQKEAIQVADMNMR 84

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + ++       S   + +E + DVIV NPPY +
Sbjct: 85  HHNITNVTLLTASIHDAQLEKM-DVIVCNPPYFK 117


>gi|111023772|ref|YP_706744.1| rRNA/tRNA methylase [Rhodococcus jostii RHA1]
 gi|110823302|gb|ABG98586.1| probable rRNA/tRNA methylase [Rhodococcus jostii RHA1]
          Length = 492

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG G    AL   S        D++ +A+++A   A  N   ER + L   WF  
Sbjct: 158 LLDVGTGCG--IQALHGASYADSVTATDLNVRAVDLAAVTAALN--EERVELLAGSWFEP 213

Query: 161 VEG-LFDVIVSNPPYIES 177
           VEG  FD +V+NPP++ S
Sbjct: 214 VEGRTFDQVVANPPFVVS 231


>gi|83942269|ref|ZP_00954730.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36]
 gi|83846362|gb|EAP84238.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36]
          Length = 408

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 7/80 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+    G   LA L        V VD S  ALE+A+  A   GV++RF T Q D F 
Sbjct: 237 RVLDVFAHVGGFSLAALAHG-ASSAVAVDGSAPALELAQQGAEAMGVTDRFATRQGDAFD 295

Query: 160 SVEGL------FDVIVSNPP 173
            +  L      FDV++ +PP
Sbjct: 296 ILTALRAEGEEFDVVICDPP 315


>gi|330809678|ref|YP_004354140.1| methyltransferase small domain [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377786|gb|AEA69136.1| Conserved hypothetical protein, containing Methyltransferase small
           domain [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 337

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R +D+G G G   + + +     + + VDI+ +AL ++  NA    V    +  +SD 
Sbjct: 138 VHRAVDIGCGAGVGAIVIARARREAQVLAVDINPQALRLSAVNAALAEVGN-VEVARSDV 196

Query: 158 FSSVEGLFDVIVSNPPYI 175
              V G FD+IV+NPPY+
Sbjct: 197 LQDVPGNFDLIVANPPYM 214


>gi|294085839|ref|YP_003552599.1| putative O-methyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665414|gb|ADE40515.1| Predicted O-methyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 253

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA ++P+  KR    ILD+G G G V L + K  P      V+I    L +A+ N   N 
Sbjct: 37  LAAAVPQRTKR----ILDMGCGVGGVALCIAKRLPDVHVTAVEIDPDMLALAERNIKDNN 92

Query: 146 VSERFDTLQSD--WFSSV-EGLFDVIVSNPPY 174
           ++ +   L  D    S V    FD +VSNPPY
Sbjct: 93  LAAQIRLLTGDIKALSPVLANSFDHVVSNPPY 124


>gi|242313188|ref|ZP_04812205.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|254173998|ref|ZP_04880661.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|160695045|gb|EDP85015.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|242136427|gb|EES22830.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
          Length = 432

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 242 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 288

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A E AK  A  NG + R + L     S V+    +  ++  +   V+ D L  E R  
Sbjct: 289 ATATEQAKQAAEANGFAGRLEFLHRPIQSLVDDPAPLKGADVVHAGFVMHDLLPAEERTL 348

Query: 191 D 191
           D
Sbjct: 349 D 349


>gi|261868483|ref|YP_003256405.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293390498|ref|ZP_06634832.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413815|gb|ACX83186.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951032|gb|EFE01151.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 334

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+G G G +   + + +P  + +  DI   AL  AK     N +  +   + SD FS
Sbjct: 197 EVLDVGCGAGVIGSYIQRHNPNTRLIMTDIHALALASAKRTLQENRL--QGTVVASDVFS 254

Query: 160 SVEGLFDVIVSNPPYIESV 178
            V+G FD+I+SNPP+ + +
Sbjct: 255 HVDGKFDLIISNPPFHDGI 273


>gi|312132197|ref|YP_003999537.1| methyltransferase small [Leadbetterella byssophila DSM 17132]
 gi|311908743|gb|ADQ19184.1| methyltransferase small [Leadbetterella byssophila DSM 17132]
          Length = 229

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R   ++  DS L  +L  IE  D  R LD+GTGTG + L + + +P      V+I   A+
Sbjct: 13  RSAMKVCTDSCLFGAL--IEASDAKRALDIGTGTGLLSLMVAQRNPSLIIDAVEIDSGAV 70

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + A  N + +  + R      D    V +  ++VI  NPP+ E+ +           DP+
Sbjct: 71  QDATENVLDSPFASRIKVFYEDIKDFVPKEKYEVIFCNPPFYENRLSSP--------DPK 122

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            +L      L  ++ +++   R L +DG
Sbjct: 123 KNL-AHHASLLKWKEVSECAKRLLAEDG 149


>gi|311033111|ref|ZP_07711201.1| Type I restriction-modification system methyltransferase subunit
           [Bacillus sp. m3-13]
          Length = 538

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 24/102 (23%)

Query: 97  DVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS 147
           D  R+ D   G+G++ L + KE P         F+   G +++     +A+ N + +GV+
Sbjct: 215 DQFRVYDPTMGSGSLLLTVQKELPNGDKEGSVEFY---GQELNTTTYNLARMNLMMHGVN 271

Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPYIES 177
                 +R DTL +DW F+  +G      FD +VSNPPY ++
Sbjct: 272 YRNMELKRADTLDADWPFAEKDGTQIPLKFDAVVSNPPYSQN 313


>gi|226306292|ref|YP_002766252.1| hypothetical protein RER_28050 [Rhodococcus erythropolis PR4]
 gi|226185409|dbj|BAH33513.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 499

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V  +LDLGTG G   +  L  + +   V   DI+ +A+++  +    NG+    + LQ  
Sbjct: 160 VGSVLDLGTGCG---IQALHANTYADSVTATDINQRAVDLTAATMALNGLD--VELLQGS 214

Query: 157 WFSSVEG-LFDVIVSNPPYI 175
           WF  VEG  FD +V+NPP++
Sbjct: 215 WFEPVEGRTFDQVVANPPFV 234


>gi|309355779|emb|CAP38256.2| hypothetical protein CBG_21464 [Caenorhabditis briggsae AF16]
          Length = 230

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           Y ++   + D +EP  +T LL+D A+   +  I  R    +L++G G+G V   + +   
Sbjct: 8   YRLQAIRAHDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALG 66

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIE 176
                V  D++  AL++    A  N +  + D +++D F+ +E L    DV++ NPPY+ 
Sbjct: 67  GNVTSVATDLNPHALDVTLETAKLNDI--KIDVVRTDLFAGLENLVGKVDVLLFNPPYVP 124

Query: 177 S 177
           +
Sbjct: 125 T 125


>gi|145221632|ref|YP_001132310.1| putative methylase [Mycobacterium gilvum PYR-GCK]
 gi|145214118|gb|ABP43522.1| putative methylase [Mycobacterium gilvum PYR-GCK]
          Length = 230

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 67  LSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           L+ D + P+ ++ LL+D+ + A  +P        R+ DL TG+G + +A           
Sbjct: 13  LAVDVYPPQEDSHLLIDAMIEAGVVPG------ARVADLCTGSGVIAIAAAAAG-AASVT 65

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
             DI  KA++  +  A+  GV    D  +  W  +VE   FDV+++NPPY+    +D  G
Sbjct: 66  AFDICPKAVQRTREEALAAGV--EVDVHRGSWARAVEFRPFDVVLANPPYVPEAPMDDSG 123

Query: 185 LEVRDFDPRISLDGGIDG 202
           L      P  + D G DG
Sbjct: 124 LISATAGPSRAWDAGPDG 141


>gi|164688849|ref|ZP_02212877.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM
           16795]
 gi|164602053|gb|EDQ95518.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM
           16795]
          Length = 249

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  ++  ++  +++DLGTGTG + + +  +S   K +GV+I  +  E+A  + 
Sbjct: 32  IDAVLLANFAKV--KNNAKVVDLGTGTGIIPILIAGKSKASKIIGVEIQEEVYEMATRSV 89

Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYI 175
             N + +R + + +D  +      V G + V  SNPPY+
Sbjct: 90  KLNDLEDRVEIINADIKTIDKELEVHG-YHVATSNPPYM 127


>gi|253681576|ref|ZP_04862373.1| type I restriction-modification system, M subunit [Clostridium
           botulinum D str. 1873]
 gi|253561288|gb|EES90740.1| type I restriction-modification system, M subunit [Clostridium
           botulinum D str. 1873]
          Length = 538

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 18/93 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPF------FKGVGVDISCKALEIAKSNAVTNGVS------ 147
           R+ D   G+G++ L + KE P+       +  G +++     +A+ N + +GV+      
Sbjct: 218 RVYDPTMGSGSLLLTVQKELPYGDEEGSVEFFGQELNTTTYNLARMNLMMHGVNYRNMEL 277

Query: 148 ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174
           +R DTL +DW F+  +G      FD +V+NPPY
Sbjct: 278 KRADTLDADWPFAEKDGTQIPLKFDAVVANPPY 310


>gi|69247085|ref|ZP_00604217.1| Methyltransferase small [Enterococcus faecium DO]
 gi|258615232|ref|ZP_05713002.1| hypothetical protein EfaeD_05923 [Enterococcus faecium DO]
 gi|293562924|ref|ZP_06677391.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1162]
 gi|293567952|ref|ZP_06679293.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1071]
 gi|294623795|ref|ZP_06702623.1| 16S RNA methylase [Enterococcus faecium U0317]
 gi|314937587|ref|ZP_07844913.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|314942914|ref|ZP_07849727.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|314947950|ref|ZP_07851354.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
 gi|314950866|ref|ZP_07853935.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|314991485|ref|ZP_07856962.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|314994995|ref|ZP_07860115.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|68194969|gb|EAN09436.1| Methyltransferase small [Enterococcus faecium DO]
 gi|291589537|gb|EFF21344.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1071]
 gi|291596749|gb|EFF27972.1| 16S RNA methylase [Enterococcus faecium U0317]
 gi|291605050|gb|EFF34517.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1162]
 gi|313590721|gb|EFR69566.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|313593965|gb|EFR72810.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|313596875|gb|EFR75720.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|313598386|gb|EFR77231.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|313642964|gb|EFS07544.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|313645548|gb|EFS10128.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
          Length = 210

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 55  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 109 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 144


>gi|304382913|ref|ZP_07365395.1| metallothionein SmtA [Prevotella marshii DSM 16973]
 gi|304335938|gb|EFM02186.1| metallothionein SmtA [Prevotella marshii DSM 16973]
          Length = 232

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 10/139 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+GTGTG + L + +        G+DI   A   A  N   +  ++R +  ++   
Sbjct: 37  MRILDIGTGTGLIALMMAQRFQQAMVTGIDIDTAACRQAWENVKASPFADRVEIQETSVQ 96

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S +    FD IVSNPP+     V+ L    R+ D + ++    D LS YR +     R L
Sbjct: 97  SYMPSEAFDAIVSNPPF----FVNSL----RNPDKQRAVARHTDTLS-YRELFAHAYRLL 147

Query: 218 NKDGLCSVEIGYNQKVDVV 236
              G+ S+ +      DV+
Sbjct: 148 TAVGIFSIIVPAEMWEDVL 166


>gi|254511958|ref|ZP_05124025.1| methyltransferase small [Rhodobacteraceae bacterium KLH11]
 gi|221535669|gb|EEE38657.1| methyltransferase small [Rhodobacteraceae bacterium KLH11]
          Length = 256

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           DF   R+ L    ++PR      VD  L A ++P    + V   L+LG G GA  L LL 
Sbjct: 13  DFLGGRIRL----WQPRTGYRAGVDPVLLAAAIPANPGQSV---LELGCGAGAAILCLLA 65

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173
             P  +  GV+I      +A+ NA  N        +++D  +  + L    FD +++NPP
Sbjct: 66  RVPDLQATGVEIQPAYAALARRNATRNAAP--LTVVEADLKALPDDLRQKQFDHVIANPP 123

Query: 174 Y 174
           Y
Sbjct: 124 Y 124


>gi|291513726|emb|CBK62936.1| Predicted O-methyltransferase [Alistipes shahii WAL 8301]
          Length = 226

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157
           R+LD+GTGTG + L L + +P     GVDI    +  A+ NA  +  S R  F       
Sbjct: 22  RMLDIGTGTGLIALMLAQRAPEAHVTGVDID--DVGQARENAAASPWSGRVAFAQCPVQE 79

Query: 158 FSSVEGLFDVIVSNPPY 174
           F + E  FD+IVSNPP+
Sbjct: 80  FETPEP-FDLIVSNPPF 95


>gi|239979273|ref|ZP_04701797.1| methyltransferas [Streptomyces albus J1074]
 gi|291451152|ref|ZP_06590542.1| methyltransferase [Streptomyces albus J1074]
 gi|291354101|gb|EFE81003.1| methyltransferase [Streptomyces albus J1074]
          Length = 224

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTGTGAV L   +     +   VDIS  A+  A+ NA       R    + D  + 
Sbjct: 43  VLDLGTGTGAVALHAARTG--ARVTAVDISWTAVLTARLNAAR--ARCRLRVHRGDLTAP 98

Query: 161 VEG-LFDVIVSNPPYIES 177
           V G  FD++VSNPPY+ +
Sbjct: 99  VTGRTFDLVVSNPPYVPA 116


>gi|39972627|ref|XP_367704.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15]
 gi|145016823|gb|EDK01253.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15]
          Length = 242

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           L++G G+G V L +   S   K V GVDI+  A+E   +N   NG+   F    SD F  
Sbjct: 84  LEIGVGSGLVSLCIA--SAGSKTVSGVDINPNAVEFTANNLQANGLKGNFTV--SDIFEK 139

Query: 161 VEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISL-----DGGIDGLSHYRTIADGVS 214
           VEG FD I  N P+  +S I D L  E +  D    L         D L+    I  G S
Sbjct: 140 VEGKFDFIFWNHPWQYDSTIPDQLKSE-KTHDSEYKLLRRFVAEAKDYLTEKGVILLGTS 198

Query: 215 RHLNKDGLCSVEI--GYNQK 232
            + N D + ++    GYN K
Sbjct: 199 AYANLDAIKTIAQSNGYNHK 218


>gi|295660939|ref|XP_002791025.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226280952|gb|EEH36518.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 445

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 21/114 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132
           PE  +   ++  F L     +    ILDLGTG G + LALL++   F+G   VGVD S K
Sbjct: 213 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGGM-LALLRDEGGFEGSRMVGVDYSPK 271

Query: 133 ALEIAK-------SNAVTNGVSE-RFD--------TLQS-DWFSSVEGLFDVIV 169
           ++E+A+       + A ++ +S  RF+         +Q+ DWF + EG FD+++
Sbjct: 272 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRAVQTLDWFPAAEGGFDIVL 325


>gi|304320585|ref|YP_003854228.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis
           HTCC2503]
 gi|303299487|gb|ADM09086.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis
           HTCC2503]
          Length = 248

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG G       +++   + V  D+S  AL  A  N    GV+   +   SD F 
Sbjct: 61  RVLDLGTGCGVGAYFCSEKAD--QIVASDVSATALANAAENCRRFGVTN-VEFRHSDMFD 117

Query: 160 SVEGLFDVIVSNPPYI 175
           +++G FD+I++NPPY+
Sbjct: 118 NIQGRFDLILANPPYL 133


>gi|332158532|ref|YP_004423811.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2]
 gi|331033995|gb|AEC51807.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2]
          Length = 396

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ T TG  A+  A+         +G+D S KA+E AK NA  NGV +R + +  + 
Sbjct: 220 RVLDVFTYTGGFAIHAAIAGAEEV---IGIDKSPKAIETAKENAKLNGVEDRVNFMVGNA 276

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E L      FD+++ +PP
Sbjct: 277 FEEMEKLQKRGEKFDIVILDPP 298


>gi|237739012|ref|ZP_04569493.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           2_1_31]
 gi|229423612|gb|EEO38659.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           2_1_31]
          Length = 222

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 83  DSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D+ L F+  +  + KR++ ++LD+GTG G + + L       + VG+DI  + +E A   
Sbjct: 29  DTILLFNYLKKSLSKRNI-KLLDIGTGNGILPILLSDNDMIEEIVGIDIQNENIERANKA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +   F  L    + +    FDV++SNPPY+E
Sbjct: 88  LELNKIEKNINFTCLDVKEYKNA-NYFDVVISNPPYME 124


>gi|260907290|ref|ZP_05915612.1| putative methyltransferase [Brevibacterium linens BL2]
          Length = 406

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--F 158
           ILDLG G G +  A ++ +    G GVD+S  A+  A+  A  NG+    DT+ +D    
Sbjct: 268 ILDLGCGNGWLLTAAMQVTAAKNGTGVDVSKAAVTSARETAEANGL--EVDTILADATDV 325

Query: 159 SSVEGLFDVIVSNPPYIESVIVDC 182
            ++ G  D+I+ NPP+ +   ++ 
Sbjct: 326 QALSGGHDLILLNPPFHQGTTIET 349


>gi|149376592|ref|ZP_01894352.1| nucleotide methyltransferase [Marinobacter algicola DG893]
 gi|149359110|gb|EDM47574.1| nucleotide methyltransferase [Marinobacter algicola DG893]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 39/82 (47%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R++DLG G G + L  L  +P  +    D+S +A+  A+ N  T           SD  
Sbjct: 234 ARVMDLGCGNGVLGLTALARNPALEVAFADVSSQAVASARHNVQTAFPGAVASFYHSDGI 293

Query: 159 SSVEGLFDVIVSNPPYIESVIV 180
               G +D+++ NPP+ E  +V
Sbjct: 294 PEAAGRYDLVLLNPPFHEGGVV 315


>gi|254520552|ref|ZP_05132608.1| methyltransferase small [Clostridium sp. 7_2_43FAA]
 gi|226914301|gb|EEH99502.1| methyltransferase small [Clostridium sp. 7_2_43FAA]
          Length = 249

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   ++KR   R +DL TGTG V   L  +    + +G++I  + +E+AK ++
Sbjct: 34  VDAVLLSNFANVKKRH--RAIDLCTGTGIVPFLLYGKYKPVEVIGIEIQNEMVEMAKRSS 91

Query: 142 VTNGVSE--RFDT--LQSDWFSSVEGLFDVIVSNPPY 174
             N + +  +F+   L+   F +  G FDV+  NPPY
Sbjct: 92  KYNELEDIIKFENADLKDMKFLNQLGKFDVLTVNPPY 128


>gi|145594015|ref|YP_001158312.1| methyltransferase small [Salinispora tropica CNB-440]
 gi|145303352|gb|ABP53934.1| methyltransferase small [Salinispora tropica CNB-440]
          Length = 494

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++ V   LDLGTG+G   L L   +   +    D+S +AL  A + A  NG  + ++ L+
Sbjct: 153 RQPVETALDLGTGSGIQALHLATHA--RRVTATDLSERALRFAATTAALNG--QDWELLR 208

Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175
            D  + V G  FD++VSNPP++
Sbjct: 209 GDLIAPVAGRRFDLVVSNPPFV 230


>gi|170718455|ref|YP_001783671.1| methyltransferase small [Haemophilus somnus 2336]
 gi|262828510|sp|B0UWL8|TRMN6_HAES2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|168826584|gb|ACA31955.1| methyltransferase small [Haemophilus somnus 2336]
          Length = 236

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           +LDLGTGTG + L L + SP    +  V++   A   AK N   +  + +    Q D   
Sbjct: 42  LLDLGTGTGLIALMLAQRSPEHCQISAVELDQLAYLQAKDNIQQSPWANKIKIFQQDIIV 101

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    E  FDVI +NPPY +   VDC
Sbjct: 102 FAQDCEHKFDVITANPPYFKQG-VDC 126


>gi|257883803|ref|ZP_05663456.1| DNA-methyltransferase [Enterococcus faecium 1,231,501]
 gi|257819641|gb|EEV46789.1| DNA-methyltransferase [Enterococcus faecium 1,231,501]
          Length = 538

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 24/96 (25%)

Query: 100 RILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           R+ D   G+G++ L + KE P         F+   G +++     +A+ N + +G++   
Sbjct: 218 RVYDPTMGSGSLLLTVKKELPAGDKSGSVDFY---GQELNTTTYNLARMNLMMHGINYQN 274

Query: 148 ---ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174
               R DTL +DW F+  EG+     FD +V+NPPY
Sbjct: 275 MNLRRADTLDADWPFAEKEGMQIPLKFDAVVANPPY 310


>gi|242277527|ref|YP_002989656.1| methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
 gi|242120421|gb|ACS78117.1| Methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
          Length = 241

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +R        +P+       DS L  S   +  +   R+LDLGTG+G + L ++   
Sbjct: 2   FEEIRNYFPRGLVQPQSGFRFSTDSLLISSFVSVPSQ--ARVLDLGTGSGVIPLGIMLRH 59

Query: 120 PFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPP 173
           P  KG+   G++I+   +  A+ N    G +E    +Q +  +   +  G +D++VSNPP
Sbjct: 60  P-DKGLNITGLEINSDMVAAAEENVQKLGFAEEIGIVQGNVCTPDFAPAGSYDLVVSNPP 118

Query: 174 Y 174
           Y
Sbjct: 119 Y 119


>gi|172056131|ref|YP_001812591.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
 gi|171988652|gb|ACB59574.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
          Length = 198

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF+ P +       ILD+G G G + ++L K +   + V VD++ +ALE+A  NA  NGV
Sbjct: 52  AFTEPDVSGA----ILDVGCGYGPMGISLAKTTGR-EAVLVDVNERALELAADNARANGV 106

Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           S    T  SD ++ V G  F  IV+NPP
Sbjct: 107 S--VTTGVSDGYAGVVGQTFAAIVTNPP 132


>gi|261206971|ref|ZP_05921660.1| methyltransferase [Enterococcus faecium TC 6]
 gi|260078599|gb|EEW66301.1| methyltransferase [Enterococcus faecium TC 6]
          Length = 201

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 46  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135


>gi|116749298|ref|YP_845985.1| hypothetical protein Sfum_1865 [Syntrophobacter fumaroxidans MPOB]
 gi|116698362|gb|ABK17550.1| SAM-dependent methyltransferase [Syntrophobacter fumaroxidans MPOB]
          Length = 389

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 5/78 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL   TGA  LA  +     + VGVD S +A++ A+SNA  N V++R + ++S+   
Sbjct: 219 RVLDLFCYTGAWGLAAARGGAS-RVVGVDASAEAVDQARSNAAANNVADRCEFIRSEALQ 277

Query: 160 SV----EGLFDVIVSNPP 173
            +    +G FDVIV +PP
Sbjct: 278 YLRTLRKGDFDVIVLDPP 295


>gi|326332231|ref|ZP_08198511.1| putative methyltransferase small domain protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325949937|gb|EGD41997.1| putative methyltransferase small domain protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 202

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 6/144 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + LA    +P  +  GVD++ +A+ +A  NA   G+ +R+         
Sbjct: 64  RILDMGCGYGIIGLACALAAPSAQVTGVDVNERAVLLANENAAKLGLGDRYRAAVPAEID 123

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                +D I SNPP    +    L   +  + PR++ DG    +       D + R L +
Sbjct: 124 PGT-TYDEIWSNPPI--RIGKQALHELLLTWLPRLAPDGRAVMVVGKNLGGDSLQRWLGE 180

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243
            G  +  IG  +     R+ E+R+
Sbjct: 181 QGFPTERIGSAKG---FRVLETRR 201


>gi|148377473|ref|YP_001256349.1| DNA methylase [Mycoplasma agalactiae PG2]
 gi|148291519|emb|CAL58905.1| DNA methylase [Mycoplasma agalactiae PG2]
          Length = 261

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 7/84 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R+L++GT  GA+ + + + S   K   ++I  KA ++A +N + N   E+ + +Q+D+
Sbjct: 47  IKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLAANNVILNNKQEQINVIQADF 106

Query: 158 -------FSSVEGLFDVIVSNPPY 174
                     V+  ++ IV NPP+
Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130


>gi|307200046|gb|EFN80392.1| N(6)-adenine-specific DNA methyltransferase 1 [Harpegnathos
           saltator]
          Length = 217

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVD 128
           +EP  ++ LL+D AL   L  +E    V  L++G+G+G V  AL   LK     + + VD
Sbjct: 17  YEPSEDSYLLID-ALEADLKVLEAMKPVICLEIGSGSGVVITALAMALKRHHSAQFIAVD 75

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
           I+  A    +  ++ N V    + LQ +    ++  G  DVI+ NPPY+ +
Sbjct: 76  INPDACRATRRTSLDNSVI--VNVLQMNLLDCIQIRGQVDVILFNPPYVAT 124


>gi|308273829|emb|CBX30430.1| hypothetical protein N47_Q17530 [uncultured Desulfobacterium sp.]
          Length = 248

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+N ++++  +    R      VDS L  S  +    D  ++LD+GTG G + L L   +
Sbjct: 17  FFNGKISIRQNKLGYR----FSVDSVLLASYVKSAAGD--KVLDIGTGCGIISLILAYRN 70

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
           P  +  G+++     ++A  N   N + E+   + +D      S + G  D+IV NPPY
Sbjct: 71  PGIEIYGIEVQKSLADLAALNVKNNCMEEQIKIVYTDVKNLKKSMLSGSPDIIVCNPPY 129


>gi|253987968|ref|YP_003039324.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253779418|emb|CAQ82579.1| ribosomal rna small subunit methyltransferase c (rrna (guanine-n2-)
           methyltransferase) (16s rrna m2g1207 methyltransferase)
           [Photorhabdus asymbiotica]
          Length = 341

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+HE +     W + Y V  T+ +       + EL V S L  S    +K     +LD+ 
Sbjct: 147 LEHEVLFEQDNWWNSYQVENTIVNTLPGVFSQNELDVGSRLLLS--TFDKPLSGNLLDIA 204

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G G +   L K++P       D++  A+  +K+    N +  +   + S+ +S++E  F
Sbjct: 205 CGAGVLAAVLGKKNPELALTLSDVNSAAIASSKATLKANKLEGK--VVVSNVYSNIEDKF 262

Query: 166 DVIVSNPPYIESVIVDCLG 184
           D I+SNPP+ E +    L 
Sbjct: 263 DWIISNPPFHEGLRTSLLA 281


>gi|271970460|ref|YP_003344656.1| methylase of polypeptide chain release factors-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270513635|gb|ACZ91913.1| Methylase of polypeptide chain release factors- like protein
           [Streptosporangium roseum DSM 43021]
          Length = 480

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V R LDLGTG G   L L   +     V  D++ +ALE+A+ +   +G+ +  D  Q
Sbjct: 138 RRPVERALDLGTGCGVQVLHLADRAREI--VATDVNPRALELARLSWALSGI-KGVDARQ 194

Query: 155 SDWFSSV-EGLFDVIVSNPPYIES 177
              F  V +  FD+IVSNPP++ S
Sbjct: 195 GSLFDPVADDRFDLIVSNPPFVIS 218


>gi|108760593|ref|YP_633081.1| methyltransferase [Myxococcus xanthus DK 1622]
 gi|108464473|gb|ABF89658.1| methyltransferase [Myxococcus xanthus DK 1622]
          Length = 385

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ D+GTGTG +   LL+          D   +A+  ++ NA   G+ +RF   ++D F 
Sbjct: 207 RVFDIGTGTGVLSFILLQRG-AASVQATDCDSRAVACSQENAERLGLGKRFQVAEADLFP 265

Query: 160 SVEGLFDVIVSNPPYI 175
             +G  D++V NPP+I
Sbjct: 266 --KGTADLVVCNPPWI 279


>gi|296131640|ref|YP_003638887.1| Methyltransferase type 11 [Thermincola sp. JR]
 gi|296030218|gb|ADG80986.1| Methyltransferase type 11 [Thermincola potens JR]
          Length = 253

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K D+  I+DLGTG+G + + L         +G+DI  +A++ A  + 
Sbjct: 38  IDAVLLANFASVKKGDL--IVDLGTGSGVIPILLTTRQQVDHIIGIDIQAEAVDRAVRSV 95

Query: 142 VTNGVSERFDTLQSDW-FSSVE---GLFDVIVSNPPYIES 177
             NG+       + D   +S E   G FD++ +NPPY+ +
Sbjct: 96  AGNGLQGLITIREGDIRNASAELGLGKFDLVTANPPYLPA 135


>gi|164660454|ref|XP_001731350.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966]
 gi|159105250|gb|EDP44136.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966]
          Length = 198

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 14/99 (14%)

Query: 107 GTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNG-----------VSERFDT 152
           GTG + L L       K V    VD    ALE+A+ NA  +            VS R+  
Sbjct: 92  GTGCIALTLAHGLRMHKDVHITAVDCDAAALELARENAKAHALDGDDDSDDALVSIRYAD 151

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +  D   ++ G FD++V NPPYI +     L   VRD++
Sbjct: 152 MLDDHSMALLGSFDLVVCNPPYIAADAWQDLDASVRDYE 190


>gi|227356263|ref|ZP_03840652.1| methyltransferase [Proteus mirabilis ATCC 29906]
 gi|227163727|gb|EEI48643.1| methyltransferase [Proteus mirabilis ATCC 29906]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD+GTG+G + L L + +P  + + G+++   A   A+ NA  +  S        D + 
Sbjct: 51  VLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQARENAQQSQWSSLIHIYHHDIYQ 110

Query: 160 SVEGL---FDVIVSNPPYIESVIV 180
             +     +D+IVSNPPY E  + 
Sbjct: 111 YAQQAPTRYDLIVSNPPYFEPAVA 134


>gi|154245322|ref|YP_001416280.1| methyltransferase small [Xanthobacter autotrophicus Py2]
 gi|154159407|gb|ABS66623.1| methyltransferase small [Xanthobacter autotrophicus Py2]
          Length = 256

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTG G+  LA L   P    V V+I+ +  ++A+ NA  N +S R + + +D   
Sbjct: 48  RMVDLGTGVGSCGLAFLTRVPQASSVLVEIAPELADLARENAALNDLSARVEVVTADVTR 107

Query: 160 SVE---------GLFDVIVSNPPY 174
                       G  D++++NPP+
Sbjct: 108 LCRPSGPDVPQVGAADLVLTNPPF 131


>gi|242022790|ref|XP_002431821.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus
           corporis]
 gi|212517153|gb|EEB19083.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus
           corporis]
          Length = 205

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 14/135 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDI 129
           +EP  +T LL+D AL   L  I  +    IL++G+G+G +  AL  L +S +   + +DI
Sbjct: 14  YEPAEDTFLLLD-ALEKDLDYIISKKPATILEIGSGSGTIITALSTLLKSSY--HLAIDI 70

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  A  +   N+  N V    D + +D  S ++    DVI+ NPPY+ +        E+ 
Sbjct: 71  NKYACSVTMQNSHYNKVI--VDVINTDLTSCLKLNCIDVIIFNPPYVVTP-----NDEIY 123

Query: 189 DFDPRI-SLDGGIDG 202
             DP   S  GG++G
Sbjct: 124 KEDPLTKSWAGGVNG 138


>gi|119489742|ref|ZP_01622500.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
 gi|119454316|gb|EAW35466.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
          Length = 219

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDT 152
             ++LD GTGT  + + + ++ P ++ + +D+S   L+I + N   +GV      ER D 
Sbjct: 42  TAQVLDAGTGTARIPILIAQQRPDWQIIAIDLSENMLKIGQQNVERSGVQTQVKLERVDA 101

Query: 153 LQSDWFSSVEGLFDVIVSN 171
            Q      +E  FD+I+SN
Sbjct: 102 KQ---LPYIEAQFDLIISN 117


>gi|257878705|ref|ZP_05658358.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,230,933]
 gi|257881346|ref|ZP_05660999.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,502]
 gi|257890564|ref|ZP_05670217.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,410]
 gi|260558265|ref|ZP_05830461.1| methyltransferase [Enterococcus faecium C68]
 gi|257812933|gb|EEV41691.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,230,933]
 gi|257817004|gb|EEV44332.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,502]
 gi|257826924|gb|EEV53550.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,410]
 gi|260075439|gb|EEW63745.1| methyltransferase [Enterococcus faecium C68]
          Length = 201

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 46  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135


>gi|226328150|ref|ZP_03803668.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
 gi|225203854|gb|EEG86208.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
          Length = 252

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ R LD+GTG+G + L L + +   + + G+++  KA   A  NA  +          S
Sbjct: 48  NIKRALDIGTGSGLIALMLAQRANKVECIDGIELDEKAALQATENAQESQWHSLIHIYHS 107

Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIV 180
           D   +    +  +D+IVSNPPY E  I 
Sbjct: 108 DIHHYAEQAQNKYDLIVSNPPYFEPAIA 135


>gi|156089291|ref|XP_001612052.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154799306|gb|EDO08484.1| conserved hypothetical protein [Babesia bovis]
          Length = 461

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 14/146 (9%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L LS+++ +   ++  L D A    L  I K + V++LD+GTG   +   +      +  
Sbjct: 157 LNLSNNSPDTSADSSELKDDASNMKLQNILKGERVKVLDIGTGANCIYPLIGSAEYGWSF 216

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFSSVEGLF------DVIVSNPPYIES 177
           +  DI   AL +AK N   N +++  +  LQ D      G+        + + NPP+  S
Sbjct: 217 IATDIDINALMLAKQNIQLNNMAKTVELRLQKDTLRMFTGVLMPHEFVHLTMCNPPFHSS 276

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGL 203
                  L+  + +PR+S    I+ L
Sbjct: 277 -------LDQANLNPRVSTCATINEL 295


>gi|297243699|ref|ZP_06927630.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD]
 gi|296888450|gb|EFH27191.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD]
          Length = 233

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + LD+G G G + +A+  ESP  + V VD++ +ALE+ + NA   G+     +L  D   
Sbjct: 85  KFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSLVDDALK 144

Query: 160 SVEGL----FDVIVSNPP 173
               L    FD+I SNPP
Sbjct: 145 ENNTLEFNNFDLIWSNPP 162


>gi|62390757|ref|YP_226159.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|21324687|dbj|BAB99310.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|41326095|emb|CAF20258.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
          Length = 511

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L          +LDLGTG+G   L   +     + +  D+  +A
Sbjct: 134 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 191

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           L+ A++  V +G+  +   ++  WF  V G  FD I++NPP++
Sbjct: 192 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 232


>gi|87120957|ref|ZP_01076849.1| putative ribosomal RNA small subunit methyltransferase C
           [Marinomonas sp. MED121]
 gi|86163795|gb|EAQ65068.1| putative ribosomal RNA small subunit methyltransferase C
           [Marinomonas sp. MED121]
          Length = 352

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD G G G + + L   +   +   +D S  A+   K +   NGVSE+   L S+  
Sbjct: 209 ARMLDFGCGDGIISIWLAMHTNA-RITALDDSALAIAATKMSCEANGVSEKMTFLGSNGL 267

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
           + V+G F+ I SNPP+ +    D
Sbjct: 268 TEVKGRFNYIFSNPPFHKGTDTD 290


>gi|167034013|ref|YP_001669244.1| methyltransferase small [Pseudomonas putida GB-1]
 gi|166860501|gb|ABY98908.1| methyltransferase small [Pseudomonas putida GB-1]
          Length = 317

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   +D+G G+G   L + + +   +   VDI+  AL     NA   GV+      +SD 
Sbjct: 138 VQHAVDIGCGSGVGALLIARAAQHAQVCAVDINPMALRHTAINAALAGVAN-VSVERSDL 196

Query: 158 FSSVEGLFDVIVSNPPYI 175
              + G FD+IV+NPPY+
Sbjct: 197 LDDIAGTFDLIVANPPYM 214


>gi|254169081|ref|ZP_04875918.1| methylase, putative [Aciduliprofundum boonei T469]
 gi|197621920|gb|EDY34498.1| methylase, putative [Aciduliprofundum boonei T469]
          Length = 165

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L++GTG GA+ +   K       + VDI   A+E  +  A    +  + +T  SD F 
Sbjct: 10  RVLEVGTGNGAIAIECAKSGSSV--LAVDIDKDAVEKLREEAKIKNL--KIETRVSDLFE 65

Query: 160 SVEGLFDVIVSNPPYI 175
           +V+G +D ++ NPPY+
Sbjct: 66  NVDGKYDTLIFNPPYL 81


>gi|19553121|ref|NP_601123.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
          Length = 509

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L          +LDLGTG+G   L   +     + +  D+  +A
Sbjct: 132 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 189

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           L+ A++  V +G+  +   ++  WF  V G  FD I++NPP++
Sbjct: 190 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 230


>gi|121604208|ref|YP_981537.1| methyltransferase small [Polaromonas naphthalenivorans CJ2]
 gi|120593177|gb|ABM36616.1| methyltransferase small [Polaromonas naphthalenivorans CJ2]
          Length = 417

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +   L   S   + V  D+  +ALE A+ N     +      +Q+D F   E
Sbjct: 243 DIGTGTGVLSAVLALRSEVDQVVATDLDPRALECARENIYRLRLPNPVKVMQADLFP--E 300

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   VIV NPP++ +     L   V D D R+ L G + GL  +
Sbjct: 301 GQASVIVCNPPWLPARPGSPLEGAVYDEDSRMLL-GFLKGLPAH 343


>gi|67536746|ref|XP_662147.1| hypothetical protein AN4543.2 [Aspergillus nidulans FGSC A4]
 gi|40741696|gb|EAA60886.1| hypothetical protein AN4543.2 [Aspergillus nidulans FGSC A4]
          Length = 423

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143
           A  L  IEK++   ILDLGTG G++ LALL++   F G  VGVD S K++E+A+   +T
Sbjct: 106 AKRLSEIEKKNQPSILDLGTGNGSM-LALLRKRGGFAGDMVGVDYSAKSVELARELQIT 163


>gi|261880672|ref|ZP_06007099.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361]
 gi|270332625|gb|EFA43411.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361]
          Length = 232

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G GTG V L L +  P     G++I  +A E  + N   +  ++R     S +  
Sbjct: 37  RLLDIGAGTGLVSLMLAQRFPSATVEGLEIDAEAAEQCQENMAASPFADRVRVYVSAFQD 96

Query: 160 SV-EGLFDVIVSNPPYIES 177
            V +  +D IVSNPPY  S
Sbjct: 97  FVPDAPYDAIVSNPPYFLS 115


>gi|157960426|ref|YP_001500460.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
 gi|226712997|sp|A8H038|RSMC_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157845426|gb|ABV85925.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
          Length = 341

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++       +LD G G G +  ALLK  P  K   VDI+  AL   +     NG + 
Sbjct: 197 NLPKMSGN----VLDFGCGAGVITAALLKAQPDLKLECVDINAMALASCELTLEANGFTA 252

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +     SD  +     +D I+SNPP+
Sbjct: 253 K--VFASDGLAQTSQRYDGIISNPPF 276


>gi|86261634|emb|CAI47647.1| putative N-methyltransferase [Streptoalloteichus hindustanus]
          Length = 262

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 7/77 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           VR +++G G  A    L KE     G  VG D+  +ALE+A+ NA  +    RF  + SD
Sbjct: 93  VRAVEIGCGAAAAICTLAKE---LTGEFVGTDVVPEALELAEENATRHRAPVRF--VVSD 147

Query: 157 WFSSVEGLFDVIVSNPP 173
            F +++G FDVI +N P
Sbjct: 148 LFDALDGRFDVIYANLP 164


>gi|283783064|ref|YP_003373818.1| methyltransferase small domain protein [Gardnerella vaginalis
           409-05]
 gi|298253512|ref|ZP_06977302.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1]
 gi|283441356|gb|ADB13822.1| methyltransferase small domain protein [Gardnerella vaginalis
           409-05]
 gi|297532279|gb|EFH71167.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1]
          Length = 232

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + LD+G G G + +A+  ESP  + V VD++ +ALE+ + NA   G+     +L  D   
Sbjct: 85  KFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSLVDDALK 144

Query: 160 SVEGL----FDVIVSNPP 173
               L    FD+I SNPP
Sbjct: 145 ENNTLEFNNFDLIWSNPP 162


>gi|262037579|ref|ZP_06011035.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii
           F0264]
 gi|261748401|gb|EEY35784.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii
           F0264]
          Length = 310

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 27/156 (17%)

Query: 57  WRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVV--------- 99
           W+ ++       N+ +  S D +EP    +++ +D  +AF     E   +          
Sbjct: 109 WKKYFHTAKITENIVIKPSWDEYEPVGNEKIIEIDPGMAFGTGTHETTSLCVEFLEKYSG 168

Query: 100 ---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+G G+G + L + K+    K  G+DI  K  E+ K N   N + E F+ +  +
Sbjct: 169 NKDKLLDIGCGSGILML-IGKKLGINKVTGIDIDEKVGEVVKENFAKNDIHENFEVIIGN 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
             + +   +D+IVSN      ++VD L   ++D + 
Sbjct: 228 LVNDINEKYDIIVSN------ILVDVLTELLKDIEK 257


>gi|224498901|ref|ZP_03667250.1| hypothetical protein LmonF1_04038 [Listeria monocytogenes Finland
           1988]
          Length = 201

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++  +    S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTYIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|257464573|ref|ZP_05628944.1| hypothetical protein AM202_04940 [Actinobacillus minor 202]
 gi|257450233|gb|EEV24276.1| hypothetical protein AM202_04940 [Actinobacillus minor 202]
          Length = 233

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V RILD+GTG+G V L L + +    +   +++   A + A  N   +  S R + +  
Sbjct: 38  NVQRILDMGTGSGLVALMLAQRTEERCQITALELEENAYQQAVENVKNSAWSARINVVHG 97

Query: 156 DWFSSV-EGLFDVIVSNPPY 174
           D  ++V    FD+IVSNPPY
Sbjct: 98  DVMNAVFSEKFDLIVSNPPY 117


>gi|283781797|ref|YP_003372552.1| methyltransferase small [Pirellula staleyi DSM 6068]
 gi|283440250|gb|ADB18692.1| methyltransferase small [Pirellula staleyi DSM 6068]
          Length = 336

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 44/93 (47%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+     L  +E R    +LD+G G G V L + K  P    + +D   +A+E  +++A
Sbjct: 182 VDAGARALLSAVEVRAGESVLDIGCGCGVVGLVICKRLPTATVLAIDSHSRAIECTQASA 241

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             N + +    L     S  +  FDV+  NPPY
Sbjct: 242 ERNELPQLTARLDPSHKSVPDASFDVVAMNPPY 274


>gi|238899304|ref|YP_002924987.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259495487|sp|C4K8X0|RSMC_HAMD5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|229467065|gb|ACQ68839.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 336

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G G +   L ++SP  +    D++  ALE +++N   N +  R   + SD +S
Sbjct: 199 KVLDLACGAGVLGTILARQSPQIELTLSDVNAAALESSRANLAVNHIKAR--VVPSDLYS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLE 186
            +   F++I+SN P+ + +  D   +E
Sbjct: 257 DIPERFNLILSNLPFHKGLKTDIKMIE 283


>gi|297561042|ref|YP_003680016.1| methyltransferase type 12 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845490|gb|ADH67510.1| Methyltransferase type 12 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 251

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L   L R+E R   RI+D+G G   + L  L+  P   G G+D+  +A+E  ++NAV 
Sbjct: 25  AGLIRDLGRLEGR---RIVDIGCGWAELLLRALESEPTATGFGIDLDEQAVEHGRANAVA 81

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            G+++R +    D  +      DV+V+N
Sbjct: 82  RGLADRVELAVGDAGAWSGTHADVVVNN 109


>gi|308095311|ref|ZP_05904919.2| methyltransferase small [Vibrio parahaemolyticus Peru-466]
 gi|308125642|ref|ZP_05776410.2| methyltransferase small [Vibrio parahaemolyticus K5030]
 gi|308126588|ref|ZP_05911121.2| methyltransferase small [Vibrio parahaemolyticus AQ4037]
 gi|308088413|gb|EFO38108.1| methyltransferase small [Vibrio parahaemolyticus Peru-466]
 gi|308107655|gb|EFO45195.1| methyltransferase small [Vibrio parahaemolyticus AQ4037]
 gi|308113323|gb|EFO50863.1| methyltransferase small [Vibrio parahaemolyticus K5030]
          Length = 215

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   +R   
Sbjct: 14  MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 73

Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177
             +D    S    F  IV NPPY  +
Sbjct: 74  QHTDVLIFSPPQRFQRIVCNPPYFNT 99


>gi|328886748|emb|CCA59987.1| possible methyltransferase [Streptomyces venezuelae ATCC 10712]
          Length = 240

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL     A  + R E R   R LDL TGTG   LAL+      +   VDIS 
Sbjct: 34  YAPQADTGLL-----AAHVRREELRPGARSLDLCTGTG--VLALVAALRGARATAVDISR 86

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            A+ +A+ NA  +    R  TL  D    V    FD++  NPPY+ S        +    
Sbjct: 87  TAIAVARLNARLHRC--RIRTLCGDLDGPVAHERFDLVTVNPPYVPSADA-----QTPSR 139

Query: 191 DPRISLDGGIDG 202
             R S D G DG
Sbjct: 140 GARRSWDAGTDG 151


>gi|269120318|ref|YP_003308495.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268614196|gb|ACZ08564.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 228

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L     RI  R V +ILD+GTG   + L LL +    +  G++I   + E+A  N 
Sbjct: 28  LDSRLLSDFCRIN-RHVKKILDIGTGNAILPL-LLSQKSKAEITGIEILKISAELAVKNI 85

Query: 142 VTNGVSERFDTLQ------SDWFSSVEGLFDVIVSNPPY 174
             N +S+R   ++      +D+F   E  FD I++NPP+
Sbjct: 86  ELNNLSDRIKIIEGDIRKWADYFRPAE--FDQIITNPPF 122


>gi|302909366|ref|XP_003050057.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI
           77-13-4]
 gi|256730994|gb|EEU44344.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI
           77-13-4]
          Length = 271

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 30/151 (19%)

Query: 76  PETEL-------LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKG 124
           PETE        L+ S         + R  + ++D  +GTG + L    +L +     + 
Sbjct: 8   PETEAYTFHLVDLIKSGELLGKEWKKGRRGLNLIDFCSGTGCIPLGLFSSLWRSVAHLRV 67

Query: 125 VGVDISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSS------VEGLFDVIV 169
            GVDIS  A ++A  N   N            +     + D FS        +  +DV+V
Sbjct: 68  TGVDISPIASKLANENIARNIRLGNLPQPNEKQNLKIARGDVFSDSDMQQLADTRWDVLV 127

Query: 170 SNPPYIESVIVD----CLGLEVRDFDPRISL 196
           SNPPYI + + +     LGL VR ++PR++L
Sbjct: 128 SNPPYISNDVWNHGRGQLGLSVRKYEPRLAL 158


>gi|163803378|ref|ZP_02197254.1| hypothetical protein 1103602000422_AND4_19002 [Vibrio sp. AND4]
 gi|159172840|gb|EDP57682.1| hypothetical protein AND4_19002 [Vibrio sp. AND4]
          Length = 239

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ILD+GTGTG + L   +  P      +DI   A+E A  N   +  S+R     +D    
Sbjct: 46  ILDIGTGTGLLALMCAQRFPSAHVTALDIEMSAIEAAHQNFAQSPWSDRLRLHYTDVLQF 105

Query: 160 SVEGLFDVIVSNPPYIES 177
             E  F+ I+ NPPY  S
Sbjct: 106 EPEQRFERIICNPPYFNS 123


>gi|145295822|ref|YP_001138643.1| hypothetical protein cgR_1747 [Corynebacterium glutamicum R]
 gi|140845742|dbj|BAF54741.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 525

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P P+  L V +A    L          +LDLGTG+G   L   +     + +  D+  +A
Sbjct: 148 PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLG--QAGAAQEIIATDVHPRA 205

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           L+ A++  V +G+  +   ++  WF  V G  FD I++NPP++
Sbjct: 206 LDFAEATLVDSGIPTQL--VEGSWFEPVRGRTFDRIIANPPFV 246


>gi|86139017|ref|ZP_01057588.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193]
 gi|85824248|gb|EAQ44452.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193]
          Length = 268

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   R+ L    ++PR      VD  L  +   I  R   R+L+LG G G   L L + 
Sbjct: 24  DFLGGRVQL----WQPREGYRAGVDPVLLAAA--IPARAGERVLELGCGGGQAFLCLAER 77

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            P     GV++      +A+ NA  NG S   + +++D  +  + L    FD +++NPPY
Sbjct: 78  VPGLAITGVELQSDYAVLARRNAAHNGQS--VEVVEADLAALPKDLRQRQFDQVLANPPY 135

Query: 175 IES 177
             +
Sbjct: 136 YRA 138


>gi|325109882|ref|YP_004270950.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis
           DSM 5305]
 gi|324970150|gb|ADY60928.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis
           DSM 5305]
          Length = 366

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDT 152
           D + +LDLG G GAV LA ++ +       +D   +A++  + NA  N +SE    RF T
Sbjct: 225 DDMTVLDLGCGCGAVGLAAMRAAKNVDVTAIDSHARAIQCTEENAKRN-LSEDQLARFTT 283

Query: 153 -LQSDWFSSVEGLFDVIVSNPPY 174
            L      + E  FD++ +NPPY
Sbjct: 284 KLTHTATLAPEAKFDIVAANPPY 306


>gi|262383338|ref|ZP_06076474.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|301309389|ref|ZP_07215331.1| methyltransferase domain protein [Bacteroides sp. 20_3]
 gi|262294236|gb|EEY82168.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|300832478|gb|EFK63106.1| methyltransferase domain protein [Bacteroides sp. 20_3]
          Length = 258

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 61  RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 119

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 120 YMPDENIKYDLIVSNPPY 137


>gi|304405628|ref|ZP_07387287.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
 gi|304345667|gb|EFM11502.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
          Length = 204

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+  K +       +DI+ +A+ +A+ NA  NG+ +     QSD + S
Sbjct: 61  VLDVGCGYGPIGLSAAKLATKGHVTMIDINERAIALAQENAKLNGI-DNITVKQSDVYQS 119

Query: 161 V-EGLFDVIVSNPP 173
           V E  +D I++NPP
Sbjct: 120 VRENRYDAILTNPP 133


>gi|291320135|ref|YP_003515393.1| DNA methylase [Mycoplasma agalactiae]
 gi|290752464|emb|CBH40436.1| DNA methylase [Mycoplasma agalactiae]
          Length = 261

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R+L++GT  GA+ + + + S   K   ++I  KA ++A  N + N   E+ + +Q+D+
Sbjct: 47  IKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLATDNVIINNKQEQINVIQADF 106

Query: 158 -------FSSVEGLFDVIVSNPPY 174
                     V+  ++ IV NPP+
Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130


>gi|167571407|ref|ZP_02364281.1| protein hemK [Burkholderia oklahomensis C6786]
          Length = 103

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   L    G +  Q+I   D  LD    +R+    A  R    E + ++ G R+F+ +
Sbjct: 24  DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEA--RRAAGEPVAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSA 85
              ++ D   PRPETELLV++A
Sbjct: 82  EFEITPDVLIPRPETELLVETA 103


>gi|308050781|ref|YP_003914347.1| methyltransferase small [Ferrimonas balearica DSM 9799]
 gi|307632971|gb|ADN77273.1| methyltransferase small [Ferrimonas balearica DSM 9799]
          Length = 234

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
           D  R+LDLGTG+G + L   + S       V++   A   A++N   +  +ER   +Q  
Sbjct: 34  DQGRVLDLGTGSGLLALMASQRSQAHI-TAVELDPDACRQAEANFAASPWTERLQLVQCD 92

Query: 156 --DWFSSVEGLFDVIVSNPPYIES 177
             DW  S    FD IV NPPY  S
Sbjct: 93  VRDWHPSAP--FDAIVCNPPYFTS 114


>gi|308070985|ref|YP_003872590.1| hypothetical protein PPE_04288 [Paenibacillus polymyxa E681]
 gi|305860264|gb|ADM72052.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 200

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L      P      VDI+ +A+++A  NA  NGV +     QSD F+ 
Sbjct: 61  VLDVGCGYGPIGLTAAALVPEGHVTMVDINERAVQLAIENAERNGV-KNVTIKQSDLFAE 119

Query: 161 VEG-LFDVIVSNPP 173
           V+   FDVI++NPP
Sbjct: 120 VKNERFDVILTNPP 133


>gi|259482627|tpe|CBF77288.1| TPA: S-adenosylmethionine-dependent methyltransferase, putative
           (AFU_orthologue; AFUA_2G02750) [Aspergillus nidulans
           FGSC A4]
          Length = 327

 Score = 45.8 bits (107), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT 143
           A  L  IEK++   ILDLGTG G++ LALL++   F G  VGVD S K++E+A+   +T
Sbjct: 106 AKRLSEIEKKNQPSILDLGTGNGSM-LALLRKRGGFAGDMVGVDYSAKSVELARELQIT 163


>gi|257885613|ref|ZP_05665266.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,501]
 gi|257821469|gb|EEV48599.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,501]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  ++LD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 46  SRVLIDAFDWEELP-----DEGKVLDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E  D  QS+ + +V E  +  IVSNPP
Sbjct: 100 QGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPP 135


>gi|158321689|ref|YP_001514196.1| methyltransferase small [Alkaliphilus oremlandii OhILAs]
 gi|158141888|gb|ABW20200.1| methyltransferase small [Alkaliphilus oremlandii OhILAs]
          Length = 255

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K    +++DLGTGTG + + L  +S       ++I  +  ++A+ + 
Sbjct: 32  IDAVLLANFVTLKKN--AKVVDLGTGTGIIPILLAGKSQTSHITALEIQKEVADMAQRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N +++R   L  D   + + L    +DV+ SNPPY+
Sbjct: 90  QLNHLADRIHVLNMDLKDAEKNLDVNGYDVVTSNPPYM 127


>gi|302866075|ref|YP_003834712.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
 gi|302568934|gb|ADL45136.1| methyltransferase small [Micromonospora aurantiaca ATCC 27029]
          Length = 489

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L L   +   +    D+S +AL  A + A  NG  + ++ L+ D  + V
Sbjct: 155 LDLGTGSGVQALHLGTHA--RRVTATDVSERALRFAATTAALNG--QDWELLRGDMVAPV 210

Query: 162 EGL-FDVIVSNPPYI 175
            G  FD++VSNPP++
Sbjct: 211 AGRRFDLVVSNPPFV 225


>gi|224475689|ref|YP_002633295.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420296|emb|CAL27110.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+G G G + L + K SP  K + +D++ +AL++AK N+  N +       +SD  + 
Sbjct: 64  IIDVGCGYGPIGLMIAKVSPHHKVILLDVNHRALDLAKENSEKNHIDNAV-IQESDGLAE 122

Query: 161 V-EGLFDVIVSNPP 173
           + +   D+IV+NPP
Sbjct: 123 IPDDSADMIVTNPP 136


>gi|46906485|ref|YP_012874.1| hypothetical protein LMOf2365_0264 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|46879749|gb|AAT03051.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
          Length = 204

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + S
Sbjct: 65  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 124

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 125 VTANDYQAIISNPP 138


>gi|322703569|gb|EFY95176.1| hypothetical protein MAA_09381 [Metarhizium anisopliae ARSEF 23]
          Length = 222

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 15/133 (11%)

Query: 62  NVRLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           N  L +    + P+  PET          +LP I K      L++G G+G V L L    
Sbjct: 32  NFELQIHPSVYSPKYFPETLWY-----GQNLPSIVKGG--SFLEMGVGSGLVSLHLAASG 84

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESV 178
              K +G DI+  A+E AK N   N  +  F  + SD F  ++G FD I  N P+ I+S 
Sbjct: 85  S--KVIGADINPFAVETAKGNFSRNRQAGTF--VVSDIFDQIDGKFDYIFWNHPWQIDSS 140

Query: 179 IVDCLGLEVRDFD 191
           + D L  E + FD
Sbjct: 141 VPDELKTE-KTFD 152


>gi|254825704|ref|ZP_05230705.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254991748|ref|ZP_05273938.1| hypothetical protein LmonocytoFSL_00527 [Listeria monocytogenes FSL
           J2-064]
 gi|255520714|ref|ZP_05387951.1| hypothetical protein LmonocFSL_05726 [Listeria monocytogenes FSL
           J1-175]
 gi|293594948|gb|EFG02709.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|328467861|gb|EGF38901.1| hypothetical protein LM1816_08950 [Listeria monocytogenes 1816]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + S
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|171058807|ref|YP_001791156.1| methyltransferase small [Leptothrix cholodnii SP-6]
 gi|170776252|gb|ACB34391.1| methyltransferase small [Leptothrix cholodnii SP-6]
          Length = 392

 Score = 45.4 bits (106), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  ALL        V  D   +AL  A  N    G + R + L++D F S  
Sbjct: 219 DIGTGTG-VLAALLVRRGVEHVVATDTDPRALACAADNLARLGCTARVELLKTDLFPS-- 275

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++       L   + D D R+ L G + GL+ +
Sbjct: 276 GRAPLVVCNPPWLPGKPSSALEHAIYDPDSRM-LRGFLSGLAAH 318


>gi|293394819|ref|ZP_06639109.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582]
 gi|291422570|gb|EFE95809.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582]
          Length = 251

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           ++LD+G G+G + L L + SP    +  V++   A E A+ N + +  S+R         
Sbjct: 53  KVLDIGCGSGLIALMLAQRSPAEIHIDAVELDTAAAEQAQENVLQSPWSQRIRVYAQNIE 112

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIV 180
           D+     G + +IVSNPPY E  + 
Sbjct: 113 DFAQRHAGRYALIVSNPPYFEPSVA 137


>gi|116747562|ref|YP_844249.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB]
 gi|116696626|gb|ABK15814.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB]
          Length = 211

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R++DLGTG   + L +         VGV++  + + +A+ N   NG  +    L++D+  
Sbjct: 14  RVVDLGTGCAVIPLIVAYRGQGRSVVGVELQPELVRLARKNVEVNGFVDSIRILEADFKE 73

Query: 158 --FSSVEGLFDVIVSNPPY 174
              S   G FD+++SNPPY
Sbjct: 74  ITSSFPPGTFDLVLSNPPY 92


>gi|333030549|ref|ZP_08458610.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
           18011]
 gi|332741146|gb|EGJ71628.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
           18011]
          Length = 235

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FS 159
           ILD+GTGTG + L L + +   +   ++I   A+  AK N   +   +R + +QSD+   
Sbjct: 41  ILDVGTGTGLIALMLAQRTVSAQIKALEIDEDAVIQAKENIERSPWKDRIEVIQSDFNLY 100

Query: 160 SVEGLFDVIVSNPPY 174
                +D+IVSNPPY
Sbjct: 101 EPNEKYDLIVSNPPY 115


>gi|302668597|ref|YP_003833045.1| type I restriction modification system M subunit HsdM [Butyrivibrio
           proteoclasticus B316]
 gi|302397561|gb|ADL36463.1| type I restriction modification system M subunit HsdM [Butyrivibrio
           proteoclasticus B316]
          Length = 531

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           E++  +++ D   G+G++   C+   KE  + K  G ++      +A+ N   +GV    
Sbjct: 214 EEKKGLQVYDPCMGSGSLMLSCMHYSKEPDYIKYYGQELMPSTYNLARMNMFLHGVLPEN 273

Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +  E  FDV+  NPPY
Sbjct: 274 QHLRNGDTLDADWPTDEETEFDVVTMNPPY 303


>gi|282878367|ref|ZP_06287159.1| methyltransferase small domain protein [Prevotella buccalis ATCC
           35310]
 gi|281299553|gb|EFA91930.1| methyltransferase small domain protein [Prevotella buccalis ATCC
           35310]
          Length = 232

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 100 RILDLGTGTGAVCLALLKE--SPFFKGVGVDI-SCKALEI-AKSNAVTNGVSERFDTLQS 155
           RILD+GTGTG + L + +   + F + + +D  +C+  ++  +++   + V  R   LQ 
Sbjct: 38  RILDVGTGTGLIALMMAQRYAASFVEALEIDRDACRQAKVNVEASPFADRVRVREVALQQ 97

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             F SV+  FD IVSNPPY     V+ L    R  D + S+    D LS Y+ +     R
Sbjct: 98  --FESVKQ-FDSIVSNPPY----FVEGL----RSPDAKRSMARHSDTLS-YKALCQSAYR 145

Query: 216 HLNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVN 248
            L  +G  SV      I       V+  F  RK +L+ 
Sbjct: 146 LLTNEGEMSVVLPVESIEQFSSTAVISGFYLRKKYLIK 183


>gi|260891354|ref|ZP_05902617.1| methyltransferase domain protein [Leptotrichia hofstadii F0254]
 gi|260858737|gb|EEX73237.1| methyltransferase domain protein [Leptotrichia hofstadii F0254]
          Length = 208

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SER 149
           +K     +LD+G G G V + +       K V  D++ +ALE+   N + N V    ++ 
Sbjct: 59  KKNQKFEVLDIGCGYGVVSVVMKAFFQKIKTVSSDVNERALELTTENLLKNEVVKDENDD 118

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPP 173
           F+  +S  F ++   FDVI+SNPP
Sbjct: 119 FEVRKSFVFDNISEKFDVILSNPP 142


>gi|15603704|ref|NP_246778.1| hypothetical protein PM1839 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81856689|sp|Q9CJZ9|TRMN6_PASMU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|12722264|gb|AAK03923.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 237

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           RILDLGTGTG + L L + S     +  V++   A   A++N   +  ++R    Q D  
Sbjct: 42  RILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANVHASPWAQRVHVYQQDAA 101

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182
            +  +    FD+IV+NPPY     VDC
Sbjct: 102 EFCRNAVNKFDLIVANPPYFPQG-VDC 127


>gi|170751715|ref|YP_001757975.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
 gi|170658237|gb|ACB27292.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
          Length = 252

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-- 150
           +  R   R+ D+G GTGAV LA    +P  +   V+        A++NA  NG+  R   
Sbjct: 40  LAPRAGDRLCDVGAGTGAVGLACAALAPGLRPTLVERDPALAGQARANATLNGIDARVLV 99

Query: 151 -DTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            D L S       GL    FDV+++NPP+  +
Sbjct: 100 ADVLASAAERRAAGLLPDSFDVVLTNPPFFAA 131


>gi|298376241|ref|ZP_06986197.1| methyltransferase small [Bacteroides sp. 3_1_19]
 gi|298267278|gb|EFI08935.1| methyltransferase small [Bacteroides sp. 3_1_19]
          Length = 218

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 21  RILDVGTGTGLIALMLAQRSTAILD-AIDIDLDACLQARENIAKSPFANRIQVYQTSLSE 79

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 80  YMPDENIKYDLIVSNPPY 97


>gi|260102435|ref|ZP_05752672.1| methyltransferase domain protein [Lactobacillus helveticus DSM
           20075]
 gi|260083755|gb|EEW67875.1| methyltransferase domain protein [Lactobacillus helveticus DSM
           20075]
          Length = 209

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + L   K  P      VD++ + L++AK NA  N +S   +   SD ++
Sbjct: 66  NILDVGTGYGPIGLLAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYT 124

Query: 160 SVEGLFDVIVSNPP 173
            V+  + +I++NPP
Sbjct: 125 QVDKKYGLILTNPP 138


>gi|254853481|ref|ZP_05242829.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932471|ref|ZP_05265830.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300764623|ref|ZP_07074615.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|258606853|gb|EEW19461.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584027|gb|EFF96059.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300514730|gb|EFK41785.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|328476090|gb|EGF46799.1| hypothetical protein LM220_01497 [Listeria monocytogenes 220]
 gi|332310662|gb|EGJ23757.1| Methyltransferase small domain superfamily [Listeria monocytogenes
           str. Scott A]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + S
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|184201225|ref|YP_001855432.1| putative methyltransferase [Kocuria rhizophila DC2201]
 gi|183581455|dbj|BAG29926.1| putative methyltransferase [Kocuria rhizophila DC2201]
          Length = 218

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL  S+P  E R+   +LD+G G G + +AL + +P  +   VD++ ++L +   NA  
Sbjct: 52  AALLRSVPDPEGRE---LLDIGCGWGPLTIALAQAAPEARVTAVDVNERSLRLTAENAAA 108

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            G+S     L  D        FD I SNPP    V  D L   +  + PR+S  G
Sbjct: 109 LGLSGVEALLPGD--VPAGRTFDTIWSNPPI--RVGKDALHEILATWLPRLSPGG 159


>gi|322515341|ref|ZP_08068337.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976]
 gi|322118628|gb|EFX90850.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976]
          Length = 236

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V +ILDLGTGTG V + L + +     +  +++   A + A  N   +  S+R    Q D
Sbjct: 39  VEQILDLGTGTGLVAVMLAQRTAETTQITALELEPNAYQQAVENCQNSVFSDRLHVCQGD 98

Query: 157 WFS-SVEGLFDVIVSNPPY 174
                 E  FD+IVSNPPY
Sbjct: 99  VLQHHFEKKFDLIVSNPPY 117


>gi|256841493|ref|ZP_05547000.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737336|gb|EEU50663.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 237

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 40  RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 98

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 99  YMPDENIKYDLIVSNPPY 116


>gi|84495067|ref|ZP_00994186.1| putative transferase [Janibacter sp. HTCC2649]
 gi|84384560|gb|EAQ00440.1| putative transferase [Janibacter sp. HTCC2649]
          Length = 495

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LD+GTG G   L L   +     V  D+S +AL  A+ NA  N V   +D   
Sbjct: 152 RRPVGAALDVGTGCGVQALHLGAHTDSI--VATDLSERALAFARFNANLNEV--EWDVRA 207

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 V G  FD+IVSNPP+   VI    G EV  F+ R   DGG  G +    +   V
Sbjct: 208 GSMLDPVAGQRFDLIVSNPPF---VITPRSG-EVPLFEYR---DGGASGDAIVANLVRSV 260

Query: 214 SRHLNKDGLCS 224
             HL   G+  
Sbjct: 261 GEHLEPGGVAQ 271


>gi|116670926|ref|YP_831859.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116611035|gb|ABK03759.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Arthrobacter sp. FB24]
          Length = 382

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG GTG +     K  P  K    D S  A++ A++ A  NG+  R   LQ D  SS
Sbjct: 238 VVDLGCGTGILAAMYAKSHPESKVTATDQSAAAVDSARATAEANGLGGRVTVLQDDAMSS 297

Query: 161 V-EGLFDVIVSNPPY 174
           + +    +I+ NPP+
Sbjct: 298 LPDSSAGLILLNPPF 312


>gi|302206342|gb|ADL10684.1| Putative methyltransferase [Corynebacterium pseudotuberculosis
           C231]
 gi|308276584|gb|ADO26483.1| Putative methyltransferase [Corynebacterium pseudotuberculosis I19]
          Length = 508

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  V  +LDLG+G+G   +  L ++P    +   DI  +AL+ A++N+  N V    +  
Sbjct: 154 RTPVHTLLDLGSGSG---IQALGQAPHAHTIIATDIHDRALDFAEANSAANKVP--LEIR 208

Query: 154 QSDWFSSVEG-LFDVIVSNPPYI 175
              WF  V G  FD IV+NPP++
Sbjct: 209 SGSWFDPVAGEKFDRIVANPPFV 231


>gi|85058367|ref|YP_454069.1| 16S ribosomal RNA m2G1207 methyltransferase [Sodalis glossinidius
           str. 'morsitans']
 gi|123520122|sp|Q2NW11|RSMC_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|84778887|dbj|BAE73664.1| ribosomal RNA small subunit methyltransferase C [Sodalis
           glossinidius str. 'morsitans']
          Length = 350

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G GTG +   L K +   +    D    AL  +++    NG+  + + L  D +S+
Sbjct: 201 VADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRATLAVNGL--QGEVLAGDVYSA 258

Query: 161 VEGLFDVIVSNPPY 174
           + G FD+I+SNPP+
Sbjct: 259 ISGRFDMIISNPPF 272


>gi|46124879|ref|XP_386993.1| hypothetical protein FG06817.1 [Gibberella zeae PH-1]
          Length = 288

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 23/121 (19%)

Query: 99  VRILDLGTGTGAVCLAL---LKESPFFKGV-GVDISCKALEIAKSNAVTN---------G 145
           V ++D  TGTG + L     L+ S     V GVDIS  AL +A+ N   N          
Sbjct: 57  VNLIDFCTGTGCIPLGFFSSLQHSVQNMTVRGVDISPVALRLAQENIARNVELQKLIKPT 116

Query: 146 VSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRIS 195
            ++R D   ++ FS  +        +D++VSNPPYI   +       LG  VR ++PR++
Sbjct: 117 RNKRLDITTANVFSDSDMQQLAVTRWDILVSNPPYISEDVWHHGRGQLGYSVRKYEPRLA 176

Query: 196 L 196
           L
Sbjct: 177 L 177


>gi|300858633|ref|YP_003783616.1| hypothetical protein cpfrc_01216 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686087|gb|ADK29009.1| hypothetical protein cpfrc_01216 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302330899|gb|ADL21093.1| Putative methyltransferase [Corynebacterium pseudotuberculosis
           1002]
          Length = 508

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  V  +LDLG+G+G   +  L ++P    +   DI  +AL+ A++N+  N V    +  
Sbjct: 154 RTPVHTLLDLGSGSG---IQALGQAPHAHTIIATDIHDRALDFAEANSAANKVP--LEIR 208

Query: 154 QSDWFSSVEG-LFDVIVSNPPYI 175
              WF  V G  FD IV+NPP++
Sbjct: 209 SGSWFDPVAGEKFDRIVANPPFV 231


>gi|293391527|ref|ZP_06635861.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952061|gb|EFE02180.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 232

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           +ILDLG G+G + L L + S     +  V+I   A + A+ N   +   ++    Q D  
Sbjct: 37  QILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQDIE 96

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182
            + +  + +FD+IV+NPPY ++  VDC
Sbjct: 97  TFCAQSKHVFDLIVANPPYFQTG-VDC 122


>gi|66801729|ref|XP_629789.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4]
 gi|60463187|gb|EAL61380.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4]
          Length = 257

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-----ESPFFKG 124
           D +EP  ++ L +DS L      I++     +L++G+G+G V   L K      S ++  
Sbjct: 28  DVYEPSEDSYLFIDS-LQKDYENIKEMKPFIMLEIGSGSGFVITFLAKLLGNDGSKYY-- 84

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVD 181
           +  DI+ KA   +   ++ N V    D L + + SS+E   G  D+++ NPPY     V 
Sbjct: 85  MSTDINPKAAIASSKTSIENNV--HLDVLNTSFVSSIERLKGSIDILLFNPPY-----VP 137

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               EV +     S  GGI+G      +   +   L+K G   +
Sbjct: 138 TPSEEVNEGGIVASWAGGINGREVIDKLLPQIPSILSKKGFFYI 181


>gi|296333103|ref|ZP_06875557.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672805|ref|YP_003864476.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149719|gb|EFG90614.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411048|gb|ADM36166.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+DS   F  P +E      ILD+G G G + L+L  +        +D++ +A+E++
Sbjct: 46  SRLLIDS---FEEPEVEGS----ILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
             NA  NG++      QSD FS+V+    F  I++NPP
Sbjct: 99  NENAEQNGIT-NVKIYQSDMFSNVDSAQTFASILTNPP 135


>gi|221068627|ref|ZP_03544732.1| methyltransferase small [Comamonas testosteroni KF-1]
 gi|220713650|gb|EED69018.1| methyltransferase small [Comamonas testosteroni KF-1]
          Length = 404

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I    + +  D+G GTG +   LLK       V  D S +AL  A  N    G + R + 
Sbjct: 220 IPAAGLQQAWDIGVGTGVLSALLLKRG-VKSVVATDTSERALACATENLQRLGHASRVEL 278

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            ++D F+  +G   +IV NPP++       L   + D D R+ L G + GLS +
Sbjct: 279 QRADLFA--QGQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLSAH 329


>gi|328462871|gb|EGF34720.1| hypothetical protein AAULH_02188 [Lactobacillus helveticus MTCC
           5463]
          Length = 209

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + L   K  P      VD++ + L++AK NA  N +S   +   SD ++
Sbjct: 66  NILDVGTGYGPIGLLAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYA 124

Query: 160 SVEGLFDVIVSNPP 173
            V+  + +I++NPP
Sbjct: 125 QVDKKYGLILTNPP 138


>gi|269114910|ref|YP_003302673.1| DNA methylase [Mycoplasma hominis]
 gi|268322535|emb|CAX37270.1| DNA methylase [Mycoplasma hominis ATCC 23114]
          Length = 260

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V  IL++GT  GA+ + +           ++I  KA+E+A+ N + N +  + + ++ 
Sbjct: 42  RKVRNILEVGTNNGALSIFIAARDKRLNIDAIEIQSKAVELARKNIILNKLENQINLIEG 101

Query: 156 D---WFSS--------VEGLFDVIVSNPPY 174
           D   W +         +   +D+IV+NPPY
Sbjct: 102 DFRMWANQKAYDCGNKLAKKYDLIVANPPY 131


>gi|189211648|ref|XP_001942153.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|189211670|ref|XP_001942164.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|189212161|ref|XP_001942406.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979352|gb|EDU45978.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979363|gb|EDU45989.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979605|gb|EDU46231.1| methyltransferase MppJ [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 340

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 19/163 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D A   ++  I+ + +  ++DLG+G+G   + +L+  P   G+GVDI+  + E+A+S+A+
Sbjct: 139 DPAFWLAMDGIDYK-IHSVVDLGSGSGERLMEILERYPGTVGLGVDIAKPSTEVARSDAI 197

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G  +R         S V G    +     + +  ++ C  +   DF PR   +  I  
Sbjct: 198 KRGFGDR--------LSFVVGDVRALSYRDEFAQVDLLTCFMMG-HDFWPR---ENCIAT 245

Query: 203 LSHYRTIADGVSRHLNKDGLC------SVEIGYNQKVDVVRIF 239
           L   RT    V R L  DG             Y+  VD V IF
Sbjct: 246 LQKLRTAFPKVRRFLLGDGTRILLNTDKTHCKYSTNVDNVPIF 288


>gi|118463475|ref|YP_882748.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium avium 104]
 gi|118164762|gb|ABK65659.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium avium 104]
          Length = 250

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107
           +T S D  +P    E+  D   +  LP     D      VVR           +LD GTG
Sbjct: 1   MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAVKGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   S  F   G+D S  A+E A++NA T GVS  F+   +      +G FD 
Sbjct: 61  PG--HHAIYYASQGFSATGIDGSAAAIERARANARTAGVSVNFELADATKLDGFDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|262831379|sp|A8AD10|TRMN6_CITK8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +     +  V++  +A   A+ N   +   +R      D
Sbjct: 45  VTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRITVHTED 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W       FD+I+SNPPY E   V+C
Sbjct: 105 VRQWVPRQTARFDLIISNPPYYEQG-VEC 132


>gi|170761794|ref|YP_001787475.1| type I restriction-modification system, M subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408783|gb|ACA57194.1| type I restriction-modification system, M subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 511

 Score = 45.4 bits (106), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           S +   L  + K+D+  + D   G+G++ L + KE+      G +++     +A+ N + 
Sbjct: 207 SKILAKLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRYFYGQELTSTTYNLARMNMLL 266

Query: 144 NGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174
           + +S ERFD    D   + E +   FD +V+NPPY
Sbjct: 267 HDISYERFDIRNDDTLENPEHIDMKFDAVVANPPY 301


>gi|309378625|emb|CBX22803.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 367

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 21/129 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + +A+  A++N    G+ ++ +  ++D F  +
Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251

Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               D+IV NPP+        IES + D     L   +RD    ++ DG I      R I
Sbjct: 252 RA--DLIVCNPPWLPAKPTSAIESALYDPDSAMLAAFLRDAPKHLNPDGEI------RLI 303

Query: 210 ADGVSRHLN 218
              ++ HL 
Sbjct: 304 ISDLAEHLG 312


>gi|46198605|ref|YP_004272.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27]
 gi|46196228|gb|AAS80645.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           A++NA  NGV  RF  L+    +++  G FD++V+N
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191


>gi|159112999|ref|XP_001706727.1| DNA methyltransferase [Giardia lamblia ATCC 50803]
 gi|157434826|gb|EDO79053.1| DNA methyltransferase [Giardia lamblia ATCC 50803]
          Length = 220

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+    S   +  +  V I   G+G+G V + +L+  P
Sbjct: 5   YEATLDDCKHVYLPDEDTFLLIDTLTKLS-GELHPQSFVEI---GSGSGVVSVHILQVFP 60

Query: 121 FFK-GVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPP 173
             + G  VDIS  A+++ +  A  N V         F+ L +   SS    FD+IV NPP
Sbjct: 61  GIREGHAVDISPHAVDMTRRTASLNNVPLCVHEGSFFEPLDAYTNSSKATRFDLIVFNPP 120

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           Y+ S   D   L   D    ++L GG +G        + +  +L  DG C
Sbjct: 121 YVPSSETDP-ALGPLD----LALAGGKNGSEVMLKFFELLPSYLALDGHC 165


>gi|255014290|ref|ZP_05286416.1| hypothetical protein B2_10291 [Bacteroides sp. 2_1_7]
          Length = 237

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 40  RILDVGTGTGLIALMLAQRSTAILD-AIDIDLDACLQARENIAKSPFANRIQVYQTSLSE 98

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 99  YMPDENIKYDLIVSNPPY 116


>gi|157144490|ref|YP_001451809.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895]
 gi|157081695|gb|ABV11373.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895]
          Length = 219

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +     +  V++  +A   A+ N   +   +R      D
Sbjct: 19  VTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRITVHTED 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W       FD+I+SNPPY E   V+C
Sbjct: 79  VRQWVPRQTARFDLIISNPPYYEQG-VEC 106


>gi|239941397|ref|ZP_04693334.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239987862|ref|ZP_04708526.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291444842|ref|ZP_06584232.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|291347789|gb|EFE74693.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
          Length = 306

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DV  I+DLG+GTG    ALL++ P  +   VD S   LE   S A   G+  R  TL++D
Sbjct: 67  DVRHIVDLGSGTGTGTFALLEQFPTARVTAVDSSPAMLERLVSAARERGLGNRVRTLEAD 126

Query: 157 WFSSVEGLFDV 167
             + + G+ D 
Sbjct: 127 AGAGLPGVADA 137


>gi|55980625|ref|YP_143922.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8]
 gi|62297879|sp|Q84BQ9|PRMA_THET8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|39654915|pdb|1UFK|A Chain A, Crystal Structure Of Tt0836
 gi|122921161|pdb|2NXE|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With S-Adenosyl-L-Methionine
 gi|122921162|pdb|2NXE|B Chain B, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With S-Adenosyl-L-Methionine
 gi|122921165|pdb|2NXJ|A Chain A, T.Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Space Group P 21 21 2
 gi|122921166|pdb|2NXJ|B Chain B, T.Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Space Group P 21 21 2
 gi|122921168|pdb|2NXN|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With Ribosomal Protein L11
 gi|134104999|pdb|2NXC|A Chain A, Apo-Form Of T. Thermophilus Ribosomal Protein L11
           Methyltransferase (Prma)
 gi|188596410|pdb|3CJQ|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596412|pdb|3CJQ|D Chain D, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596414|pdb|3CJQ|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596416|pdb|3CJR|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Ribosomal Protein L11 (K39a) And Inhibitor
           Sinefungin.
 gi|188596437|pdb|3CJU|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Trimethylated Ribosomal Protein L11
 gi|206582140|pdb|3EGV|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Trimethylated Ribosomal Protein L11
 gi|212374912|pdb|2ZBP|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-L-Methionine
 gi|212374913|pdb|2ZBQ|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-L-Homocysteine
 gi|212374914|pdb|2ZBR|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-Ornithine
 gi|55772038|dbj|BAD70479.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           A++NA  NGV  RF  L+    +++  G FD++V+N
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191


>gi|218282386|ref|ZP_03488668.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989]
 gi|218216672|gb|EEC90210.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989]
          Length = 217

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L     R++K++  RILD+GT  GA+ L    +    + VGV++  +  ++A+ NA 
Sbjct: 27  DTKLLAQFVRLKKQE--RILDIGTNNGAL-LVYFDQFHIKELVGVEVLEETSKVAQKNAD 83

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              +      +       V+ LFDV+VSNPPY +
Sbjct: 84  C-FIKHPVKIVNQPIQEYVDDLFDVVVSNPPYFK 116


>gi|188596421|pdb|3CJT|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596423|pdb|3CJT|C Chain C, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596425|pdb|3CJT|E Chain E, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596427|pdb|3CJT|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596429|pdb|3CJT|I Chain I, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596431|pdb|3CJT|K Chain K, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596433|pdb|3CJT|M Chain M, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596435|pdb|3CJT|O Chain O, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
          Length = 254

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           A++NA  NGV  RF  L+    +++  G FD++V+N
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191


>gi|302561655|ref|ZP_07313997.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302479273|gb|EFL42366.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 349

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 37/70 (52%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +  R   R LDLG G G + +      P F GVG+D++ +A+  A+  A  NGV++R
Sbjct: 162 LEAMRGRGATRALDLGCGGGQLLVDACLNDPGFSGVGIDLAPEAVAAAQDLARRNGVADR 221

Query: 150 FDTLQSDWFS 159
                +D F+
Sbjct: 222 LSFFVADAFA 231


>gi|289450687|ref|YP_003475049.1| methyltransferase small domain-containing protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185234|gb|ADC91659.1| methyltransferase small domain protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 212

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G + + L    P  K   VDI+ +A+ +AK N   +G+        SD FS
Sbjct: 68  RALDLGCGIGIIAIVLQGYLPQLKFSAVDINERAVSLAKRNVQASGLD--IPVHVSDGFS 125

Query: 160 SV-EGLFDVIVSNPP 173
           ++ E  F +IVSNPP
Sbjct: 126 ALKEEEFSLIVSNPP 140


>gi|167752001|ref|ZP_02424128.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216]
 gi|167660242|gb|EDS04372.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216]
          Length = 232

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSD 156
           R+LD+GTGTG + L L + S  +   V +D+ C     A  N   +  ++R D  ++   
Sbjct: 37  RMLDVGTGTGLIALMLAQRSAAWITAVDIDVECATQ--AAENFAASPWADRLDAVSVAVQ 94

Query: 157 WFSSVEGLFDVIVSNPPY 174
            +  VE  FD+IVSNPPY
Sbjct: 95  RYDPVEK-FDLIVSNPPY 111


>gi|301299984|ref|ZP_07206209.1| putative type I restriction-modification system, M subunit
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852375|gb|EFK80034.1| putative type I restriction-modification system, M subunit
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 463

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 16/89 (17%)

Query: 95  KRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-R 149
           K++ V I D   GT ++ L    A LKE+ ++   G DIS +A++ A  NA+ N ++E +
Sbjct: 169 KKEGVSIYDPALGTASLLLGINQAALKENRYY---GQDISTQAVKTAIMNAIVNDIAEDK 225

Query: 150 FD-----TLQSDWFSSVEGLFDVIVSNPP 173
           F+     TL ++W     G  D++VS+PP
Sbjct: 226 FEFKNENTLANNWEF---GKVDIVVSDPP 251


>gi|262831311|sp|A6LD46|TRMN6_PARD8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 40  RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQAQENIAKSPFANRIQVYQTSLSE 98

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 99  YMPDENIKYDLIVSNPPY 116


>gi|257125478|ref|YP_003163592.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis
           C-1013-b]
 gi|257049417|gb|ACV38601.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis
           C-1013-b]
          Length = 310

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 27/147 (18%)

Query: 57  WRDFY-------NVRLTLSSDTFEPRP-ETELLVDSALAFS----------LPRIEK--R 96
           W+ ++       N+ +  S D +EP   E  + +D  LAF           +  +EK  +
Sbjct: 109 WKKYFHTVNITDNIVIKPSWDEYEPESNEIVIEIDPGLAFGTGTHETTSLCVEFLEKYVK 168

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+G G+G + L + K+    K VG+DI  K  ++   N   NG+++ F+ +  +
Sbjct: 169 GKEKLLDIGCGSGILML-IGKKLGVKKVVGIDIDEKVRDVVLENFSKNGINDDFEVIIGN 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCL 183
               V G +D++VSN      ++VD L
Sbjct: 228 LVDDVNGKYDLVVSN------ILVDVL 248


>gi|256852103|ref|ZP_05557490.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN]
 gi|260661327|ref|ZP_05862240.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN]
 gi|297205022|ref|ZP_06922418.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16]
 gi|256615515|gb|EEU20705.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN]
 gi|260547782|gb|EEX23759.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN]
 gi|297149600|gb|EFH29897.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16]
          Length = 203

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  NGV+   +   S  + +
Sbjct: 67  ILDVGCGYGPIGLFAAKKWPDRQVDMVDVNERAMDLARKNAEVNGVTN-VNIFASSVYEN 125

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 126 VDKQYAMILTNPP 138


>gi|29467707|dbj|BAC67244.1| ribosomal protein L11 methyltransferase [Thermus thermophilus]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSG--VLAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           A++NA  NGV  RF  L+    +++  G FD++V+N
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191


>gi|153839372|ref|ZP_01992039.1| methyltransferase [Vibrio parahaemolyticus AQ3810]
 gi|149747120|gb|EDM58108.1| methyltransferase [Vibrio parahaemolyticus AQ3810]
          Length = 239

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   +R   
Sbjct: 38  MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97

Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177
             +D    S    F  IV NPPY  +
Sbjct: 98  QHTDVLIFSPPQRFQRIVCNPPYFNT 123


>gi|332289730|ref|YP_004420582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330432626|gb|AEC17685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 276

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPF-FKGVGVDIS----CKALEIAKSNAVTNGVSERFDTLQ 154
           RILDLG GTG + L L + S    + VGV+I     C+AL+    +  +  V+    ++Q
Sbjct: 74  RILDLGCGTGLIALMLAQRSAADCQIVGVEIEENAYCQALDNVAISPWSARVTIYHQSMQ 133

Query: 155 SDWFSSVEGLFDVIVSNPPYIESV 178
             +       FD+IV+NPPY ES 
Sbjct: 134 -QFCRETSQRFDLIVANPPYFESA 156


>gi|226366208|ref|YP_002783991.1| hypothetical protein ROP_67990 [Rhodococcus opacus B4]
 gi|226244698|dbj|BAH55046.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 493

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG G    AL   S        D++ +A+++A   A  N   +  + L   WF  
Sbjct: 158 LLDIGTGCG--IQALHGASYAHSITATDLNVRAVDLAAVTAALN--EQEVELLAGSWFEP 213

Query: 161 VEG-LFDVIVSNPPYIES 177
           VEG  FD IV+NPP++ S
Sbjct: 214 VEGRTFDQIVANPPFVVS 231


>gi|218296236|ref|ZP_03496992.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           aquaticus Y51MC23]
 gi|218243308|gb|EED09838.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           aquaticus Y51MC23]
          Length = 219

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 35/69 (50%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TGTG + L L   +P  + VG D +   LEIA+  A   G+S  F    +    
Sbjct: 39  RILDLATGTGDLALLLKASAPEAEVVGADFAPPMLEIARKKASARGLSVAFQEADALALP 98

Query: 160 SVEGLFDVI 168
             +G FD +
Sbjct: 99  FPDGSFDAV 107


>gi|294673744|ref|YP_003574360.1| 50S ribosomal protein L11 methyltransferase [Prevotella ruminicola
           23]
 gi|294472251|gb|ADE81640.1| ribosomal protein L11 methyltransferase [Prevotella ruminicola 23]
          Length = 280

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 13/111 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVV----------RILDLGTGTGAVCLALLKESPFF 122
           E   + ++ +D+ LAF     E   ++          R+LD GTGTG + +  LK     
Sbjct: 108 EVDSKVQIEIDAKLAFGTGTHETTRMICTQLLKLAKGRVLDCGTGTGILSICALKLGAT- 166

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           + VG DI   +++ A+ NAV N V +RF +L  D     +++  FD++++N
Sbjct: 167 EAVGYDIDEWSVDNARHNAVINRVDDRFTSLLGDAKILENIDEKFDIVLAN 217


>gi|182438576|ref|YP_001826295.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467092|dbj|BAG21612.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 294

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DV  ++DLG+GTG    ALL+  P  +   VD S + LE   S A   G+ +R  TL++D
Sbjct: 60  DVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARDRGLGDRVRTLEAD 119

Query: 157 WFSSVEGLFDV 167
             + + G+ D 
Sbjct: 120 AGAGLPGVADA 130


>gi|308048606|ref|YP_003912172.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM
           9799]
 gi|307630796|gb|ADN75098.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM
           9799]
          Length = 366

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLG G G + +ALL+ +P    + VD S  A+   + N  +     RF+ + +D  S 
Sbjct: 226 IVDLGCGNGVLSMALLQANPDAHILAVDESWDAVRSTEENLASVADQSRFEVVWNDCLSG 285

Query: 161 VE-GLFDVIVSNPPYIESVIV 180
           ++ G  D +V NPP+ +   V
Sbjct: 286 MDGGQADWVVCNPPFHQQQAV 306


>gi|260892856|ref|YP_003238953.1| methyltransferase small [Ammonifex degensii KC4]
 gi|260864997|gb|ACX52103.1| methyltransferase small [Ammonifex degensii KC4]
          Length = 392

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LD    TG   +A  K     + V VD+S +ALE+A+ NAV NGV E+    +++ F
Sbjct: 219 MRVLDCFCYTGGFAVAAAK-GEAEEVVAVDVSEQALELARENAVLNGVEEKISWREANCF 277

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      FD+++ +PP
Sbjct: 278 DELRRLEKAGEKFDLVILDPP 298


>gi|28897280|ref|NP_796885.1| hypothetical protein VP0506 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260876245|ref|ZP_05888600.1| methyltransferase small domain protein [Vibrio parahaemolyticus
           AN-5034]
 gi|81839890|sp|Q87SB8|TRMN6_VIBPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|28805489|dbj|BAC58769.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308092858|gb|EFO42553.1| methyltransferase small domain protein [Vibrio parahaemolyticus
           AN-5034]
          Length = 239

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   +R   
Sbjct: 38  MESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWHDRLSV 97

Query: 153 LQSD-WFSSVEGLFDVIVSNPPYIES 177
             +D    S    F  IV NPPY  +
Sbjct: 98  QHTDVLIFSPPQRFQRIVCNPPYFNT 123


>gi|313668347|ref|YP_004048631.1| hypothetical protein NLA_10380 [Neisseria lactamica ST-640]
 gi|313005809|emb|CBN87263.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 331

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 21/128 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + +A+  A++N    G+ ++ +  ++D F  +
Sbjct: 157 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 215

Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               D+IV NPP+        +ES + D     L   +RD    ++ DG I      R I
Sbjct: 216 RA--DLIVCNPPWLPAKPTSAVESALYDPDSAMLAAFLRDAPKHLNPDGEI------RLI 267

Query: 210 ADGVSRHL 217
              ++ HL
Sbjct: 268 ISDLAEHL 275


>gi|183599785|ref|ZP_02961278.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827]
 gi|188022049|gb|EDU60089.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827]
          Length = 242

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           + LD+G+G+G + L L + +       V++   A + A+ N   +   ER    + D   
Sbjct: 44  KALDIGSGSGLIALMLAQRNQQMTVDAVELDKAAAQQAQENFAESKWGERLQIFEQDITQ 103

Query: 158 FS-SVEGLFDVIVSNPPYIESVI 179
           FS S +  +D+IVSNPPY E  +
Sbjct: 104 FSVSRQKAYDLIVSNPPYFEPSV 126


>gi|15897648|ref|NP_342253.1| hypothetical protein SSO0748 [Sulfolobus solfataricus P2]
 gi|284174974|ref|ZP_06388943.1| hypothetical protein Ssol98_10001 [Sulfolobus solfataricus 98/2]
 gi|6015728|emb|CAB57555.1| hypothetical protein [Sulfolobus solfataricus P2]
 gi|13813915|gb|AAK41043.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261602417|gb|ACX92020.1| methylase [Sulfolobus solfataricus 98/2]
          Length = 207

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 26/150 (17%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  +RL L+  T+EP  +T++L+      SL R+ K D  ++LD+G+G+G + +  L  
Sbjct: 8   EFRGIRLCLNDQTYEPSDDTDILL------SLLRVGKGD--KVLDMGSGSGILGIWSLMM 59

Query: 119 SPFFKGVGVDISCKA-LEIAKSNAVTN--GVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
               K V VDI+  A L    S  V N       +  L  D  S +    FDV + NPPY
Sbjct: 60  GG--KVVFVDINPYATLSTLCSLKVNNLYNTPNYYGVLNCDLLSCLRKYDFDVAIFNPPY 117

Query: 175 IESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
                     L V +++  I  S  GG DG
Sbjct: 118 ----------LPVEEYNEWIEYSWSGGNDG 137


>gi|323491503|ref|ZP_08096685.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG
           20546]
 gi|323314257|gb|EGA67339.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG
           20546]
          Length = 235

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   + S       +DI   A+E A++N   +  S+R     +D    
Sbjct: 42  LLDIGTGTGLLALMCAQRSHLLNIEAIDIEQNAIEAAQANFDASAWSDRLTLHHADVLKH 101

Query: 160 SVEGLFDVIVSNPPYIES 177
             +  F+ I+ NPPY  S
Sbjct: 102 PFKHSFEAIICNPPYFNS 119


>gi|297538014|ref|YP_003673783.1| methyltransferase small [Methylotenera sp. 301]
 gi|297257361|gb|ADI29206.1| methyltransferase small [Methylotenera sp. 301]
          Length = 392

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L        +  D S +AL+ A  N    G+      ++++ F S E
Sbjct: 216 DIGTGTG-VLAAILANRGITNIIATDNSHRALDCALKNVNLLGLKNNVKLVEANLFPSAE 274

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-SHYRTIADG 212
            G  D+IV NPP++ +     L   + D   ++ L G ++GL +H  T  +G
Sbjct: 275 YGKADLIVCNPPWLPAHPSSALESAIYDEKSKM-LKGFLNGLNAHLNTNGEG 325


>gi|239833219|ref|ZP_04681548.1| methyltransferase small [Ochrobactrum intermedium LMG 3301]
 gi|239825486|gb|EEQ97054.1| methyltransferase small [Ochrobactrum intermedium LMG 3301]
          Length = 355

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 70  DTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           D F+  P   +  ++D   A  +P +EK     + DLG G G +    LK +   K + +
Sbjct: 182 DVFQTEPGMFSHGVIDKGSALLVPHMEKIVFGNVADLGAGWGYLAAQCLKFADRIKAIDL 241

Query: 128 -DISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
            ++  +ALE A+ N    G S     +  +WF      + G++D +V NPP+ E  + D 
Sbjct: 242 YEVDFEALEAARGNLERLGPSV---PISFNWFDVTSEKLTGIYDTVVMNPPFHEGRVTDV 298


>gi|254226531|ref|ZP_04920114.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620935|gb|EAZ49286.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 240

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSAWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 LPSKR--FAAIICNPPYFNS 123


>gi|307132127|ref|YP_003884143.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Dickeya dadantii 3937]
 gi|306529656|gb|ADM99586.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Dickeya dadantii 3937]
          Length = 254

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 13/130 (10%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R+  RILD+G G+G + L L + S     V GV++   A E A  NA  +  ++     Q
Sbjct: 52  REESRILDIGCGSGLIALMLAQRSGGRIPVDGVELDVAASEQAAGNAAASPWADSIRIHQ 111

Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            D   +  +V   + +IVSNPPY  +  VDC   +        +L         + T+ D
Sbjct: 112 IDILAYARAVASRYSLIVSNPPYF-TPGVDCASAQRAQARYTATLT--------HETLLD 162

Query: 212 GVSRHLNKDG 221
             SR L  DG
Sbjct: 163 CASRLLTPDG 172


>gi|161528888|ref|YP_001582714.1| methylase [Nitrosopumilus maritimus SCM1]
 gi|160340189|gb|ABX13276.1| putative methylase [Nitrosopumilus maritimus SCM1]
          Length = 178

 Score = 45.1 bits (105), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 39/189 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +D + P  +T  + ++        IE  +    LD+G+G+G +   LL E+ F   VG D
Sbjct: 8   NDEYPPSEDTFFIAEN--------IENENGEYALDIGSGSGYLT-KLLSEN-FSLVVGTD 57

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           I+C  L+   S    N +         +   +++  FD IV N PY+ +        E+ 
Sbjct: 58  INCDVLQHQSSYKTQNLIC-------CNGSDALKVKFDFIVCNLPYLATD-------EIL 103

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------LCSVE--IGYNQKVDV-VR 237
           D    I+ DGG +G    + I D    +L K+G        L + E  I Y QK+ +  R
Sbjct: 104 D----IATDGGAEGFEIPKKIFDSAKNNLKKNGKFVFVTSSLSNYEKLIDYAQKLGLKTR 159

Query: 238 IFESRKLFL 246
           I   +KLF 
Sbjct: 160 IMAKKKLFF 168


>gi|300869710|ref|YP_003784581.1| modification methylase BsuBI [Brachyspira pilosicoli 95/1000]
 gi|300687409|gb|ADK30080.1| modification methylase, BsuBI [Brachyspira pilosicoli 95/1000]
          Length = 406

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 13/108 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           F P+   +LL+   +  S    EK+D V+ILD   G+G   L+      +FK     G D
Sbjct: 29  FTPKSIRDLLLKELINIS----EKKDNVKILDPACGSGEFLLSC---REYFKNAHMHGFD 81

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           I    + I+K   + N   +  DTL+ D   S++  +D I+ NPPY E
Sbjct: 82  IDESLVSISKK-LINNADIKCLDTLKFDTDKSIK--YDYIIGNPPYFE 126


>gi|326779224|ref|ZP_08238489.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
 gi|326659557|gb|EGE44403.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
          Length = 302

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DV  ++DLG+GTG    ALL+  P  +   VD S + LE   S A   G+ +R  TL++D
Sbjct: 68  DVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARDRGLGDRVRTLEAD 127

Query: 157 WFSSVEGLFDV 167
             + + G+ D 
Sbjct: 128 AGAGLPGVADA 138


>gi|302540724|ref|ZP_07293066.1| putative methylase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458342|gb|EFL21435.1| putative methylase [Streptomyces himastatinicus ATCC 53653]
          Length = 218

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 11/108 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDIS 130
           + P+ +T LL ++       R       ++LD+GTGTGA  LALL       GV  VD+S
Sbjct: 2   YAPQDDTALLAEAVC-----REPAMPGAQVLDIGTGTGA--LALLAARCGAAGVEAVDVS 54

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            +A+  A  N   +G   R      D  S   G  FDV+++NPPY+ S
Sbjct: 55  ARAVLAAWLNTRRSGQPVRVRL--GDLASVASGRRFDVVLANPPYVPS 100


>gi|161502253|ref|YP_001569365.1| hypothetical protein SARI_00281 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863600|gb|ABX20223.1| hypothetical protein SARI_00281 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 219

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     V  V++  +A   A+ N   +  + R  T+ +
Sbjct: 18  DVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI-TVHT 76

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 77  DDIQRWAPRQTVRFDLIISNPPYYE 101


>gi|85858414|ref|YP_460616.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
           SB]
 gi|85721505|gb|ABC76448.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
           SB]
          Length = 319

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           + + +LD+GTGTG + +A  K     + + VDI  KA EIAK N   N V +R    Q +
Sbjct: 179 EPLNVLDVGTGTGILGIASAKLG-AERVLCVDIDPKATEIAKENIAINHVEDRVSVRQEE 237

Query: 157 WFSSVEGLFDVIVSN 171
             S+++G +++IV+N
Sbjct: 238 -ISTLKGTYNLIVAN 251


>gi|260439407|ref|ZP_05793223.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus
           DSM 2876]
 gi|292808203|gb|EFF67408.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus
           DSM 2876]
          Length = 245

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  ++ + D  ++LDL TG G + + L   +   +  G++I    +++AK + 
Sbjct: 32  IDAVLLCSFTKVNEGD--KVLDLCTGNGVIPILLKGRTKGSRFSGLEIQDINVDMAKRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             NG+ E  D ++ D   +     E  FDV+  NPPY+
Sbjct: 90  EYNGIGEFVDIVKGDVKEASGIFGEASFDVVTCNPPYM 127


>gi|262831280|sp|A9MGW2|TRMN6_SALAR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     V  V++  +A   A+ N   +  + R  T+ +
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI-TVHT 102

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127


>gi|323465895|gb|ADX69582.1| Methyltransferase domain protein [Lactobacillus helveticus H10]
          Length = 209

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + L   K  P      VD++ + L++AK NA  N +S   +   SD ++
Sbjct: 66  NILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYA 124

Query: 160 SVEGLFDVIVSNPP 173
            V+  + +I++NPP
Sbjct: 125 QVDKKYGLILTNPP 138


>gi|323345620|ref|ZP_08085843.1| metallothionein SmtA [Prevotella oralis ATCC 33269]
 gi|323093734|gb|EFZ36312.1| metallothionein SmtA [Prevotella oralis ATCC 33269]
          Length = 234

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           +RILD+GTGTG + L + +     + VGV+I   A   A+ N   +    R + + +   
Sbjct: 37  MRILDVGTGTGLIALMMAQRFAESRVVGVEIDVDACLQAQQNVTESPFVSRVEIINARLQ 96

Query: 156 DWFSSVEGLFDVIVSNPPY 174
           D+   ++  FD IVSNPP+
Sbjct: 97  DYLPDIK--FDSIVSNPPF 113


>gi|329120300|ref|ZP_08248968.1| methyltransferase domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327462641|gb|EGF08964.1| methyltransferase domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 378

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G +  ALL +         D + +AL  A++N    G ++     ++D F   
Sbjct: 201 FDIGTGSG-ILAALLAQRGITCITATDNNPRALACARANIRRLGFADNISVEEADLFP-- 257

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+I+ NPP++ +       +E   +DP         G +  R   +G + HLN +G
Sbjct: 258 EGRADLILCNPPWLPAKPTSA--IETALYDP---------GHAMLRGFLNGAAAHLNPNG 306


>gi|325068357|ref|ZP_08127030.1| DNA methyl transferase [Actinomyces oris K20]
          Length = 541

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            TF P P    +V S L ++  R+      R++D G G+G   LA L+  P   G+  D+
Sbjct: 73  QTFTPAP----IVRSMLEWTKGRVTP---ARVVDPGCGSGRYILAALRAFPHAVGLASDL 125

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI 175
              A  + ++NA   G+  R   +  D+       +EG+  + + NPPY+
Sbjct: 126 DPYATLMTRANARVLGLESRLKVIVGDYRALRLPKIEGV-TLFLGNPPYV 174


>gi|311744775|ref|ZP_07718571.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311311892|gb|EFQ81813.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 199

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 5/138 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G + LA  +  P  +   VD++ +A E+   NA  +G++ R  +       
Sbjct: 61  RLLDLGCGWGPLALAAARTHPSAEVWAVDVNDRARELTALNAERHGLAVRVASPDG---V 117

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  FD I SNPP    V    L   +  + PR++ DG +  +      AD + R L  
Sbjct: 118 PPEVQFDAIWSNPPI--RVGKQALHELLLRWLPRLTPDGELMMVVGRNLGADSLHRWLVD 175

Query: 220 DGLCSVEIGYNQKVDVVR 237
            G  +  +  ++   V+R
Sbjct: 176 QGWPTERVASSRGFRVLR 193


>gi|170595492|ref|XP_001902404.1| methylase family protein [Brugia malayi]
 gi|158589947|gb|EDP28750.1| methylase, putative family protein [Brugia malayi]
          Length = 199

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 12/122 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV---CLALL 116
            Y++        +EP  +T LL+D AL      +E+ +   ++++G+G+G +   C  LL
Sbjct: 6   LYHITDEQKDSVYEPAEDTFLLLD-ALEKDREALEQLEPNVVVEIGSGSGIISVFCQQLL 64

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172
           +  P    V  D++ KAL+  ++ A  N V+   + +Q D  S+++    GL DV++ NP
Sbjct: 65  R-VPVLTLV-TDMNFKALQCTRATAQLNNVA--VEAVQCDLLSALDHRLYGLVDVLLFNP 120

Query: 173 PY 174
           PY
Sbjct: 121 PY 122


>gi|15643837|ref|NP_228885.1| ribosomal protein L11 methyltransferase, putative [Thermotoga
           maritima MSB8]
 gi|38605526|sp|Q9X0G8|PRMA_THEMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|4981624|gb|AAD36156.1|AE001768_5 ribosomal protein L11 methyltransferase, putative [Thermotoga
           maritima MSB8]
          Length = 264

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158
           +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V    D L   SD  
Sbjct: 133 VLDVGCGTGILAIAA-KKLGASRVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187

Query: 159 SSVEGLFDVIVSN 171
           S VEG FD++VSN
Sbjct: 188 SEVEGTFDIVVSN 200


>gi|330831275|ref|YP_004394227.1| ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
           B565]
 gi|328806411|gb|AEB51610.1| Ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
           B565]
          Length = 342

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G G G +   L K +P  +   VDIS  ALE ++     NG+  +     SD +S
Sbjct: 205 ELLDFGCGAGVIGSVLAKRNPELQVNMVDISALALESSRRTLAINGLQGKVTA--SDVYS 262

Query: 160 SVEGLFDVIVSNPPY 174
            +   F  IVSNPP+
Sbjct: 263 DLSTRFQHIVSNPPF 277


>gi|161506946|ref|YP_001576900.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571]
 gi|160347935|gb|ABX26609.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571]
          Length = 209

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P      VD++ + L++AK NA  N +S   +   SD ++ 
Sbjct: 67  ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYAQ 125

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 126 VDKKYGLILTNPP 138


>gi|160882029|ref|YP_001560997.1| methyltransferase type 11 [Clostridium phytofermentans ISDg]
 gi|160430695|gb|ABX44258.1| Methyltransferase type 11 [Clostridium phytofermentans ISDg]
          Length = 256

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +I+  +    LD+GTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 43  MDAVLLSGFAKIKPEEST--LDMGTGTGIIPILLAGKTKGKHFTGLEIQEESADMARRSV 100

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
           + N + +R + ++ D   + +    G FDV+  NPPY+ +
Sbjct: 101 LYNDLQDRIEIVKGDIKETSKIFGGGSFDVVTCNPPYMNN 140


>gi|324998204|ref|ZP_08119316.1| rRNA/tRNA methylase [Pseudonocardia sp. P1]
          Length = 522

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V  +LDLGTG G   L   + +   +    D+  +AL +A+ +   +GV    D  +
Sbjct: 158 RRPVGSLLDLGTGCGVQALHGSRHA--LRVTATDVLPRALALARLSCGLSGVD--VDLRE 213

Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177
             WFS V G  FD +VSNPP++  
Sbjct: 214 GPWFSPVAGERFDQVVSNPPFVPG 237


>gi|150008489|ref|YP_001303232.1| hypothetical protein BDI_1875 [Parabacteroides distasonis ATCC
           8503]
 gi|149936913|gb|ABR43610.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 319

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q   S+
Sbjct: 122 RILDVGTGTGLIALMLAQRSTAILD-AIDIDSDACLQAQENIAKSPFANRIQVYQTSLSE 180

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +       +D+IVSNPPY
Sbjct: 181 YMPDENIKYDLIVSNPPY 198


>gi|50291423|ref|XP_448144.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527455|emb|CAG61095.1| unnamed protein product [Candida glabrata]
          Length = 340

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 33/273 (12%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V G +    IV  ++V  +     L        +   +  +LG + F    L        
Sbjct: 52  VQGNAVQGNIVQGNAVPGNTAARRLLRGCAARFRGVPLQYVLGSQPFGAAELVCRPGVLI 111

Query: 74  PRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLAL---LKESP-FFK 123
           PR ETE      LA ++ R   +  +       ++DL TGTG V + +   L  +P   K
Sbjct: 112 PRWETEEWALK-LARAIARYSSQQPLAQPLKLTLVDLCTGTGCVPIGIHDELARAPSLIK 170

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV--------------EGLFDVI 168
              VD+S +A+++ + N     +  ++ D L+ D  + +                  D++
Sbjct: 171 YTAVDVSPQAIDLCRLNVGRRAIEVKQVDVLRQDSPADIVGGLGPGRGLGLGRGPAIDIL 230

Query: 169 VSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           + NPPYI            VR ++PR++L   I     Y+ + D  S+H N       EI
Sbjct: 231 LCNPPYIPRKAFTRTTARSVRLYEPRLAL---IADKEFYKNLVDVWSQHTNS---FVYEI 284

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G + + + V+      ++ V    D  G  R +
Sbjct: 285 GDSSQYEYVKQALDPSVWSVGLHIDSNGCPRAV 317


>gi|313206496|ref|YP_004045673.1| methyltransferase type 12 [Riemerella anatipestifer DSM 15868]
 gi|312445812|gb|ADQ82167.1| Methyltransferase type 12 [Riemerella anatipestifer DSM 15868]
 gi|315023563|gb|EFT36567.1| Methyltransferase [Riemerella anatipestifer RA-YM]
 gi|325336058|gb|ADZ12332.1| Predicted O-methyltransferase [Riemerella anatipestifer RA-GD]
          Length = 235

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-S 160
           L++G GTG + L + + +P    + +DI   A  +A+ N   +   ER  ++  ++    
Sbjct: 44  LEVGCGTGIISLMIAQRNPNCSIIAIDIDENASNLAQENFDNSVYQERLKSININFMEYQ 103

Query: 161 VEGLFDVIVSNPPYIESVIVD 181
               FD+I SNPPY E+   D
Sbjct: 104 PNQKFDLIFSNPPYFETNTSD 124


>gi|303241042|ref|ZP_07327552.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
 gi|302591467|gb|EFL61205.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
          Length = 251

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLGTGTG + + L  ++     VG++I     E+A  +   N + +R   +  D   S
Sbjct: 49  VIDLGTGTGIISILLAGKTEAKSIVGLEIQEDIAEMADRSVKMNCLEDRVKIVCGDIKES 108

Query: 161 V----EGLFDVIVSNPPYI 175
           V       FDV+VSNPPY+
Sbjct: 109 VGRFGASSFDVVVSNPPYM 127


>gi|288926735|ref|ZP_06420646.1| SAM-dependent methyltransferase [Prevotella buccae D17]
 gi|288336465|gb|EFC74840.1| SAM-dependent methyltransferase [Prevotella buccae D17]
          Length = 228

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTGTG + L + +  P     G+DI   A   A+ NA  +  + R +   S     
Sbjct: 51  ILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFAPRIEVAHSSLAGF 110

Query: 161 VEGL-----FDVIVSNPPY 174
           V        FD IV NPP+
Sbjct: 111 VAAASPPLSFDSIVCNPPF 129


>gi|224541620|ref|ZP_03682159.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525458|gb|EEF94563.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM
           15897]
          Length = 243

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 17/159 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +E I+ +LG+ D   +++    D F         +D+ L  +   I K D+  I+D GT 
Sbjct: 2   NEEINHLLGYND---MKIIQRRDMFT------FSLDTVLLANFCAITK-DMKTIVDFGTN 51

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLF 165
             A+ L +L +    K +GV+I  +A+EIA+ N   N V ++ + +  D    V+     
Sbjct: 52  NAAIPL-ILTQRTHKKIIGVEIQKEAVEIAERNVKLNHVEDQVEIIHDDIKEYVKYAPRT 110

Query: 166 DVIVSNPPYI----ESVIVDCLGLEVRDFDPRISLDGGI 200
             IV NPP+     +S I +   + +   + +I L+G I
Sbjct: 111 KAIVCNPPFFKLGEKSHINESPYMTIARHEIKIDLEGII 149


>gi|213964724|ref|ZP_03392924.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46]
 gi|213952917|gb|EEB64299.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46]
          Length = 521

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V  +LDLG G G   LA     P  K  V  DI  +AL  A++    NG  ++   L+  
Sbjct: 169 VESVLDLGAGCGIQSLA----QPDAKSIVATDIHPRALFFARATFAANGF-DQAQALEGS 223

Query: 157 WFSSVEGL-FDVIVSNPPYI 175
           WF  V G  FD IV+NPP++
Sbjct: 224 WFEPVAGQKFDRIVANPPFV 243


>gi|197285751|ref|YP_002151623.1| hypothetical protein PMI1896 [Proteus mirabilis HI4320]
 gi|262828580|sp|B4F055|TRMN6_PROMH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|194683238|emb|CAR43937.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 252

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD+GTG+G + L L + +P  + + G+++   A   A  NA  +  S        D + 
Sbjct: 51  VLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQASENAQQSQWSSLIHIYHHDIYQ 110

Query: 160 SVEGL---FDVIVSNPPYIESVIV 180
             +     +D+IVSNPPY E  + 
Sbjct: 111 YAQQAPTRYDLIVSNPPYFEPAVA 134


>gi|125623890|ref|YP_001032373.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124492698|emb|CAL97652.1| Ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. cremoris MG1363]
          Length = 198

 Score = 45.1 bits (105), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K+      + VD++ +AL++ + NA+ N VS     L S+ + +
Sbjct: 63  LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 120

Query: 161 VEGLFDVIVSNPP 173
           V   +D I+SNPP
Sbjct: 121 VSEKYDAIISNPP 133


>gi|310644213|ref|YP_003948972.1| methyltransferase small [Paenibacillus polymyxa SC2]
 gi|309249164|gb|ADO58731.1| Methyltransferase small [Paenibacillus polymyxa SC2]
          Length = 204

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L      P      VDI+ +A+++A  NA  NG+ +     QSD F+ 
Sbjct: 61  VLDVGCGYGPIGLTAATLVPDGHVTMVDINERAVQLAIENAERNGI-KNVTIKQSDLFAE 119

Query: 161 VEG-LFDVIVSNPP 173
           V+   FDVI++NPP
Sbjct: 120 VQHERFDVILTNPP 133


>gi|317046810|ref|YP_004114458.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
 gi|316948427|gb|ADU67902.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
          Length = 343

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A  L  +      ++LD+G G+G +   L + SP  +    D+   A+  +K+  
Sbjct: 181 LDAGSALLLSTLTPHTKGKVLDIGCGSGVLATVLAQHSPKVRLWLCDVHAAAVAASKATL 240

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             NG+    +   S+ FS V G FD+I+SNPP+
Sbjct: 241 AANGLEG--EVFASNVFSDVTGRFDLIISNPPF 271


>gi|330447421|ref|ZP_08311070.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491612|dbj|GAA05567.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 236

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LD+GTG+G + L   + +P      ++I  +A   A+ N   +   ER   ++ D   
Sbjct: 39  RLLDIGTGSGLLALIAAQRAPMLSIEAIEIDPQAANAARQNFAASPWHERLHCIEQDITL 98

Query: 157 WF-SSVEGLFDVIVSNPPY 174
           W  S      D I+ NPPY
Sbjct: 99  WLQSQPSNSVDGIICNPPY 117


>gi|224542341|ref|ZP_03682880.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524723|gb|EEF93828.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
           15897]
          Length = 197

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  +LD+G G GA+ ++L    P      VD++ +A+++AK   + +   E     +S+ 
Sbjct: 58  VKSVLDVGCGYGALSISLKMVYPDVTFDMVDVNRRAMDLAK-RTIEDYHLEDMHVYESNA 116

Query: 158 FSSVEGLFDVIVSNPP 173
           +  VE  FD+I+SNPP
Sbjct: 117 YDQVEKTFDMIISNPP 132


>gi|282934788|ref|ZP_06340026.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
 gi|281301151|gb|EFA93457.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
          Length = 199

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  NGV+   +   S  + +
Sbjct: 63  ILDVGCGYGPIGLFAAKKWPDRQVDMVDVNERAMDLARKNAEVNGVT-NVNIFASSVYEN 121

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 122 VDKQYAMILTNPP 134


>gi|328885830|emb|CCA59069.1| HEN1 C-terminal domain; double-stranded RNA 3-methylase
           [Streptomyces venezuelae ATCC 10712]
          Length = 495

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 68  SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S+DT E P P  E   D+ LA +L R E     R+LDLG G G +  ALLK+  F + VG
Sbjct: 272 STDTEERPVPLAEQRRDAILA-ALARAE---ASRVLDLGCGQGQLVQALLKDVRFTEIVG 327

Query: 127 VDISCKALEIAKSNAVTNGVSER 149
           VD+S +AL +A      + + ER
Sbjct: 328 VDVSVRALTVAARRLRLDRLGER 350


>gi|238063487|ref|ZP_04608196.1| methyltransferase [Micromonospora sp. ATCC 39149]
 gi|237885298|gb|EEP74126.1| methyltransferase [Micromonospora sp. ATCC 39149]
          Length = 497

 Score = 44.7 bits (104), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++ V   LDLGTG+G   L L   +   +    D+S +AL  A + A  NG  + ++ L 
Sbjct: 156 RQPVESALDLGTGSGVQALHLSTHA--RRVTATDVSQRALRFAATTAALNG--QDWELLC 211

Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175
            D  + V G  FD++VSNPP++
Sbjct: 212 GDMVAPVAGRRFDLVVSNPPFV 233


>gi|295702341|ref|YP_003595416.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319]
 gi|294800000|gb|ADF37066.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319]
          Length = 200

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + LAL KE        VD++ +AL +A+ NA  N VS      QS  + +
Sbjct: 62  LLDVGCGYGPIGLALAKEDSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYEN 120

Query: 161 V-EGLFDVIVSNPP 173
           V E  F  I+SNPP
Sbjct: 121 VKETNFAAILSNPP 134


>gi|294496974|ref|YP_003560674.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM
           B1551]
 gi|294346911|gb|ADE67240.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM
           B1551]
          Length = 200

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + LAL KE        VD++ +AL +A+ NA  N VS      QS  + +
Sbjct: 62  LLDVGCGYGPIGLALAKEDSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYEN 120

Query: 161 V-EGLFDVIVSNPP 173
           V E  F  I+SNPP
Sbjct: 121 VKETNFAAILSNPP 134


>gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis]
 gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis]
          Length = 366

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + L LL+ +   K V V+I  + +EI +  A   G+ ++ D +  D   +
Sbjct: 83  VLEIGPGTGNLTLRLLEVAR--KVVAVEIDKRMVEILRERASEQGLQDKLDIIHKDALKA 140

Query: 161 VEGLFDVIVSNPPY-IESVIVDCLGLEVRDF 190
               F+++V+N PY I S +V  L   V  F
Sbjct: 141 EFPNFNIVVANIPYGISSPLVTKLVYGVNKF 171


>gi|4104516|gb|AAD02056.1| unknown [Clostridium acetobutylicum DSM 1731]
          Length = 244

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%)

Query: 57  WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95
           W+ +Y       R+ +    + + P+  E  L +D  +AF             +L R   
Sbjct: 49  WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 108

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V+   + L  
Sbjct: 109 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 165

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D+IV+N      +I D + + + D +  +  DG        +  A+ V  
Sbjct: 166 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 219

Query: 216 HLNKDGLCSVEI 227
           +L K+    +E+
Sbjct: 220 NLKKNKFEIIEV 231


>gi|189347631|ref|YP_001944160.1| Mg-protoporphyrin IX methyl transferase [Chlorobium limicola DSM
           245]
 gi|189341778|gb|ACD91181.1| magnesium protoporphyrin O-methyltransferase [Chlorobium limicola
           DSM 245]
          Length = 232

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R    +++D A ++ L ++       ILD G GTG   + L KE   +K   VDI+ + +
Sbjct: 44  RQGHAVMMDKAFSW-LQQLNLPKGATILDAGCGTGLFSIRLAKEG--YKVKAVDIASQMV 100

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           E AK++A   GV+   D  + +   SV+G +D +V
Sbjct: 101 EKAKADATMQGVNNNID-FEVNTIESVKGTYDAVV 134


>gi|302888461|ref|XP_003043117.1| hypothetical protein NECHADRAFT_101990 [Nectria haematococca mpVI
           77-13-4]
 gi|256724032|gb|EEU37404.1| hypothetical protein NECHADRAFT_101990 [Nectria haematococca mpVI
           77-13-4]
          Length = 332

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L  D+ L    P +   +V R+LDLGTGTG   +    E P  + VGVD+S      ++ 
Sbjct: 78  LTFDNKLGLCPPNLPDSNVKRVLDLGTGTGIWAIDFGDEHPEAEVVGVDLSP-----SQP 132

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           N V   V    D +  DW  +    FD I S
Sbjct: 133 NMVPPNVQFLIDDIDEDW--TYTKPFDYIHS 161


>gi|50119218|ref|YP_048385.1| ribosomal protein L11 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
 gi|60390386|sp|Q6DAJ5|PRMA_ERWCT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|49609744|emb|CAG73178.1| ribosomal protein L11 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 295

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS     GG  GLS    T ADGV+ 
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLSTQADGVAE 268


>gi|307595644|ref|YP_003901961.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550845|gb|ADN50910.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 198

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + +   K +P  + V VDI+  A+++A  N   N VS   +   SD +++
Sbjct: 60  ILDMGCGYGVLGIVAAKLAPRGRVVMVDINKLAVKLAAINIKINRVSNA-EVRLSDLYNA 118

Query: 161 VEG-LFDVIVSNPP 173
           V+G  F+ I+SNPP
Sbjct: 119 VQGEKFNTIISNPP 132


>gi|291442928|ref|ZP_06582318.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|291345875|gb|EFE72779.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
          Length = 213

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 66/149 (44%), Gaps = 13/149 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+T+ L+   LA ++ R        +LDL TG+GA  LAL       +   VDIS +A+
Sbjct: 8   RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGA--LALHAARLGARVTAVDISRRAV 62

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ N     +       + D   ++ G  FD +VSNPPY+ +      GL +    P 
Sbjct: 63  ASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAP-----GLALPRHGPG 115

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            S D G DG      I D     L   GL
Sbjct: 116 RSWDAGPDGRVILDRICDDAFAALRPGGL 144


>gi|254168616|ref|ZP_04875459.1| methylase, putative [Aciduliprofundum boonei T469]
 gi|197622450|gb|EDY35022.1| methylase, putative [Aciduliprofundum boonei T469]
          Length = 165

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++L++GTG GA+ +   K       + VDI  +A++  +  A    +  + +T  SD F 
Sbjct: 10  KVLEVGTGNGAIAIECAKSGSSV--LAVDIDKEAVKRLREEAKIKNL--KIETKVSDLFE 65

Query: 160 SVEGLFDVIVSNPPYI 175
           +V+G +D I+ NPPY+
Sbjct: 66  NVDGKYDTIIFNPPYL 81


>gi|116787734|gb|ABK24622.1| unknown [Picea sitchensis]
 gi|224286210|gb|ACN40814.1| unknown [Picea sitchensis]
          Length = 277

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 58  RDFYNVRLT-LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL- 115
           R   ++RL    S+ +EP  ++  LVD+ LA  +  +E+      L+LG G+G V  +L 
Sbjct: 37  RKSADIRLVGCHSEVYEPCDDSFALVDALLADRV-HLEEVQPSLCLELGCGSGYVITSLA 95

Query: 116 --LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIV 169
             L E    + +  DI+  A+E+ K     +GV    + + +D  S ++    G  DV+V
Sbjct: 96  LMLGEGTGIQYLATDINSAAIEVTKKTLEAHGV--HAEVILTDLVSGLDKRLAGTVDVLV 153

Query: 170 SNPPYIES 177
            NPPY+ +
Sbjct: 154 VNPPYVPT 161


>gi|33865682|ref|NP_897241.1| hypothetical protein SYNW1148 [Synechococcus sp. WH 8102]
 gi|33632852|emb|CAE07663.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 222

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 55/121 (45%), Gaps = 29/121 (23%)

Query: 76  PETELLVDSA--LAFS-----------LPRIEK----------RDVVRILDLGTGTGAVC 112
           PE EL+VD A  LA++           L RIE            D   ILDLG G G + 
Sbjct: 5   PEPELMVDPAQVLAYAAADFSGGDQRTLDRIEALLSSASGRAASDPAVILDLGCGPGNIS 64

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVS 170
           L L K  P  + +GVD S   L++A+  A   G+S   R  TLQ      V    D+IVS
Sbjct: 65  LPLAKRFPESQVIGVDGSRAMLQVARDRANQQGLSIDLRCSTLQDLALEPV----DLIVS 120

Query: 171 N 171
           N
Sbjct: 121 N 121


>gi|224282622|ref|ZP_03645944.1| hypothetical protein BbifN4_02239 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287082|ref|YP_003938340.1| methyltransferase domain [Bifidobacterium bifidum S17]
 gi|313139781|ref|ZP_07801974.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171]
 gi|309251018|gb|ADO52766.1| Conserved hypothetical protein with methyltransferase domain
           [Bifidobacterium bifidum S17]
 gi|313132291|gb|EFR49908.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171]
          Length = 217

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   +LDLG G G V LAL   SP      VD++ +AL++ ++NA +NG  E     
Sbjct: 70  EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGC-EHIHAA 128

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             +   + +  FD I SNPP
Sbjct: 129 SPEQVPA-DLTFDAIWSNPP 147


>gi|311063947|ref|YP_003970672.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010]
 gi|310866266|gb|ADP35635.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010]
          Length = 217

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   +LDLG G G V LAL   SP      VD++ +AL++ ++NA +NG  E     
Sbjct: 70  EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGC-EHIHAA 128

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             +   + +  FD I SNPP
Sbjct: 129 SPEQVPA-DLTFDAIWSNPP 147


>gi|154685168|ref|YP_001420329.1| YefA [Bacillus amyloliquefaciens FZB42]
 gi|154351019|gb|ABS73098.1| YefA [Bacillus amyloliquefaciens FZB42]
          Length = 464

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 34/185 (18%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61
           F+ R +       I++     D   +F    +IV+++     + I G      W + Y  
Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIY 273

Query: 62  ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
               +V+  +S+ +F +  PE T++L D AL ++    E +    ++D   G G + L L
Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFL 329

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168
            K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   EG+  D +
Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYK--EGITADTL 385

Query: 169 VSNPP 173
           V +PP
Sbjct: 386 VVDPP 390


>gi|126731920|ref|ZP_01747724.1| putative methyltransferase [Sagittula stellata E-37]
 gi|126707747|gb|EBA06809.1| putative methyltransferase [Sagittula stellata E-37]
          Length = 211

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I  R   R +DLG G G   + L +    +K V VD+S  AL+  + NA T GV+ER   
Sbjct: 38  IAGRPAGRAVDLGCGRGDDAIWLARNG--WKVVAVDVSQAALDTVRRNAETAGVAERVTW 95

Query: 153 LQSDWFSSV-EGLFDVIVS 170
           L+ D   S+ +G FD+++S
Sbjct: 96  LRHDLSKSLPDGPFDLVLS 114


>gi|148270786|ref|YP_001245246.1| ribosomal L11 methyltransferase [Thermotoga petrophila RKU-1]
 gi|281413091|ref|YP_003347170.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
 gi|166223499|sp|A5IN97|PRMA_THEP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|147736330|gb|ABQ47670.1| LSU ribosomal protein L11P methyltransferase [Thermotoga petrophila
           RKU-1]
 gi|281374194|gb|ADA67756.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
          Length = 264

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158
           +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V    D L   SD  
Sbjct: 133 VLDVGCGTGILAIAA-KKLGASQVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187

Query: 159 SSVEGLFDVIVSN 171
           S VEG FD++VSN
Sbjct: 188 SEVEGTFDIVVSN 200


>gi|72162084|ref|YP_289741.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX]
 gi|71915816|gb|AAZ55718.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX]
          Length = 205

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSD 156
           +LDLG G G + LA+   +P    VG+D + +AL +A+ NA  N V      R    +  
Sbjct: 62  LLDLGCGYGPIALAMALRAPKATVVGIDTNQRALALARRNAEANAVPNVSFHRAPGPEDP 121

Query: 157 WFSSVEGLFDVIVSNPP 173
               + G F  + SNPP
Sbjct: 122 VDPLLRGPFAALWSNPP 138


>gi|289595708|ref|YP_003482404.1| methylase [Aciduliprofundum boonei T469]
 gi|289533495|gb|ADD07842.1| methylase [Aciduliprofundum boonei T469]
          Length = 177

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++L++GTG GA+ +   K       + VDI  +A++  +  A    +  + +T  SD F 
Sbjct: 22  KVLEVGTGNGAIAIECAKSGSSV--LAVDIDKEAVKRLREEAKIKNL--KIETKVSDLFE 77

Query: 160 SVEGLFDVIVSNPPYI 175
           +V+G +D I+ NPPY+
Sbjct: 78  NVDGKYDTIIFNPPYL 93


>gi|321313777|ref|YP_004206064.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5]
 gi|320020051|gb|ADV95037.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5]
          Length = 201

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 16/101 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKAL 134
           + LL+DS   F  P +E      ILD+G G G + L+L  +   FK   +   D++ +A+
Sbjct: 46  SRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASD---FKDRSIHMIDVNERAV 95

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
           E++  NA  NG++      QSD FS+V+    F  I++NPP
Sbjct: 96  ELSNENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPP 135


>gi|116512245|ref|YP_809461.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107899|gb|ABJ73039.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 227

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K+      + VD++ +AL++ + NA+ N VS     L S+ + +
Sbjct: 92  LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 149

Query: 161 VEGLFDVIVSNPP 173
           V   +D I+SNPP
Sbjct: 150 VSEKYDAIISNPP 162


>gi|87308463|ref|ZP_01090604.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645]
 gi|87289020|gb|EAQ80913.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645]
          Length = 226

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGT  + +AL ++ P  + + +D+S   L +AK+N   +G+ +R      D   +
Sbjct: 54  VLDVGTGTALIPIALCQKLPMARVMAIDMSTAMLTLAKANVDMDGMLDRIQLAHIDAADT 113

Query: 161 --VEGLFDVIVSN 171
                +FD+++SN
Sbjct: 114 GYENEMFDLVISN 126


>gi|229470502|sp|Q0VPK2|RLMG_ALCBS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 390

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
            ++ DLG G G + +A+LK +P  +    D S  ALE A+ N     VS  F   +S   
Sbjct: 240 AKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDN-----VSRYFSDAESHFH 294

Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180
             D  + +E  FD I+ NPP+ +  +V
Sbjct: 295 LGDGLAGLEQRFDCILLNPPFHDGYVV 321


>gi|300070662|gb|ADJ60062.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 227

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L K+      + VD++ +AL++ + NA+ N VS     L S+ + +
Sbjct: 92  LLDVGCGYGTLGLTLAKKFDLSVTM-VDVNSRALDLCRQNAIDNAVSNTEIEL-SNIYEA 149

Query: 161 VEGLFDVIVSNPP 173
           V   +D I+SNPP
Sbjct: 150 VSEKYDAIISNPP 162


>gi|240102588|ref|YP_002958897.1| SAM-dependent rRNA adenine methyltransferase, putative
           [Thermococcus gammatolerans EJ3]
 gi|239910142|gb|ACS33033.1| SAM-dependent rRNA adenine methyltransferase, putative
           [Thermococcus gammatolerans EJ3]
          Length = 206

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 27/124 (21%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLGTGTG  A+   LL      K   V++  KALE+AK NA  +GV   F  +Q+D  
Sbjct: 51  VADLGTGTGVLAIGAKLLGAE---KVYAVEVDPKALEVAKRNAERSGVEVEF--IQAD-V 104

Query: 159 SSVEGLFDVIVSNPPY-----------------IESVI--VDCLGLEVRDFDPRISLDGG 199
           S      D +V NPP+                 + + +  +    LEVR F  R S D G
Sbjct: 105 SEFSERVDTVVMNPPFGSQKKGADRPFLLKAFEVSNTVYSIHLAKLEVRSFIERFSADNG 164

Query: 200 IDGL 203
               
Sbjct: 165 FTAF 168


>gi|303243574|ref|ZP_07329916.1| methyltransferase small [Methanothermococcus okinawensis IH1]
 gi|302486135|gb|EFL49057.1| methyltransferase small [Methanothermococcus okinawensis IH1]
          Length = 201

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 13/135 (9%)

Query: 45  SLKHESIHRILGWRDFY-NVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           S K ES H+ +       N +LT  +DT  F P+      +D      +  ++      +
Sbjct: 5   SEKPESAHKEITIEGILRNKKLTFKTDTGIFSPKK-----IDKGTKILVEALKLNKNYDV 59

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFS 159
           LD+G G G V +A+  E         DI+ +A+ +AK N   N  S  +    +Q D + 
Sbjct: 60  LDIGCGYGVVGIAIADEVNSI--TMTDINKRAVRLAKENIKLNDTSKDKNIRVVQGDLYE 117

Query: 160 SVEGL-FDVIVSNPP 173
           +V+   +D+I+SNPP
Sbjct: 118 NVKDKNYDMIISNPP 132


>gi|261819598|ref|YP_003257704.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae
           WPP163]
 gi|261603611|gb|ACX86097.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae
           WPP163]
          Length = 295

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS     GG  GLS    T ADGV+ 
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLSTQADGVAE 268


>gi|20090299|ref|NP_616374.1| HemK related protein [Methanosarcina acetivorans C2A]
 gi|19915299|gb|AAM04854.1| HemK related protein [Methanosarcina acetivorans C2A]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 59  DFYNVRLTLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           ++ N R+ L +    +EP  ++ LL D+AL       E +  +R+L++G G+G V   L 
Sbjct: 5   EYKNTRVKLGASDLVYEPAEDSFLLADAALE------EAKPGMRVLEIGAGSGFVSAVLR 58

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 +    +I+  A   AK+N +    ++ F  L+     S +  FD+I+ NPPY+ 
Sbjct: 59  ANVEDIRIFATEINPHAARCAKANGIEVIRTDLFRGLKP---GSSKTSFDLILFNPPYLP 115

Query: 177 S 177
           +
Sbjct: 116 T 116


>gi|300173179|ref|YP_003772345.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887558|emb|CBL91526.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811]
          Length = 253

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +DLG GTGAV L     +P   G+   V+I  +  E+AK +   NG+ +R   LQSD   
Sbjct: 53  VDLGAGTGAVGLFY---APKVAGLIKLVEIQPELAEMAKRSIAMNGLQDRVSVLQSDMKA 109

Query: 158 -FSSVE-GLFDVIVSNPPY 174
            F  ++ G  + ++SNPPY
Sbjct: 110 IFDDIQPGSAETVLSNPPY 128


>gi|257469152|ref|ZP_05633246.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317063399|ref|ZP_07927884.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313689075|gb|EFS25910.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 244

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 15/131 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I K ++  I+DLGTG GA+ L L K++   K  G++I   + ++A+ N 
Sbjct: 30  LDSLLISEFASITK-NINNIVDLGTGNGAIPLFLSKKTK-AKITGIEIQEISSDLARRNI 87

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI-----ESVIVDCLGLEVRDF 190
             N + ++   +  D      +F++     D++VSNPP+      E ++ D   L +   
Sbjct: 88  KLNNLEDQITIINDDMKNWRKYFTT--HTLDMVVSNPPFFKFNGNEELLNDLTQLTLARH 145

Query: 191 DPRISLDGGID 201
           +  I+LD  I+
Sbjct: 146 EISITLDTLIE 156


>gi|283797151|ref|ZP_06346304.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
 gi|291075568|gb|EFE12932.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
          Length = 250

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 8/100 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG + + L  ++      G++I     E+A+ +   NG+  + + +  D   
Sbjct: 53  RALDLGTGTGIIPILLEAKTEGSYFAGLEIQENMAEMARRSVWLNGLEGKIEIVTGDIKE 112

Query: 160 SVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +        FDV+ SNPPY+     D  GL+  D    I+
Sbjct: 113 AGRIFGAASFDVVTSNPPYMN----DSHGLKNPDLPKAIA 148


>gi|330890549|gb|EGH23210.1| HemK family modification methylase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 314

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 1/79 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R +D+G GTGA  L +    P  +   VDI+ KAL  A+ NA   G+ E      SD 
Sbjct: 135 ISRAVDIGGGTGAGALLIAVARPQAQVYAVDINPKALHFAQINARVAGL-ENMQCCHSDI 193

Query: 158 FSSVEGLFDVIVSNPPYIE 176
            S + G FD+IV+NPPY++
Sbjct: 194 LSGLTGNFDLIVANPPYMK 212


>gi|331229677|ref|XP_003327504.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309306494|gb|EFP83085.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 371

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 60/165 (36%), Gaps = 43/165 (26%)

Query: 60  FYNVRLTLSSDTFEPRPETELLV-----------------------DSALAFSLPRIEKR 96
           F ++  T+      PRPETE  V                        ++     P+  + 
Sbjct: 66  FGDLTFTIRPPILIPRPETEQWVTELSRTMNSYFQAIRSSRPSADESTSPHLPAPKQSRP 125

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LDLGTG+G +   L         VGVDI   A     S ++T             
Sbjct: 126 SSFKVLDLGTGSGCISNYLAYHHQDVHAVGVDIDQDANLKQASQSLTG------------ 173

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                   FD+I+SNPPYI       L   V+ ++  I+L G  D
Sbjct: 174 --------FDMIISNPPYIPLPDYHHLPQSVKGWESSIALIGDRD 210


>gi|258648434|ref|ZP_05735903.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259]
 gi|260851184|gb|EEX71053.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259]
          Length = 232

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 6/84 (7%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           RILD+GTG+G + L L + +     G+ +D +  A   A+ N   +  ++R   + +D  
Sbjct: 39  RILDIGTGSGLIALMLAQRTDAMITGIEIDPASAAQ--AQENVAASPWADRLQIVATDIA 96

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
            ++S +  FD+IVSNPP+   +++
Sbjct: 97  GYTSYQA-FDLIVSNPPFFNEMLL 119


>gi|218134398|ref|ZP_03463202.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989783|gb|EEC55794.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC
           43243]
          Length = 254

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   + + DV   +DL TG G + + +  ++      G++I  ++ E+A+ + 
Sbjct: 35  IDAVLLANYAVVNEGDVC--MDLCTGNGIIPVLMEAKTKGKHYTGLEIQKESAELARKSV 92

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             N  ++R D +  D  ++V     G FDV+  NPPY+
Sbjct: 93  ELNNTADRIDIVNDDLKNAVALYKRGRFDVVTVNPPYM 130


>gi|331696189|ref|YP_004332428.1| methylase [Pseudonocardia dioxanivorans CB1190]
 gi|326950878|gb|AEA24575.1| methylase [Pseudonocardia dioxanivorans CB1190]
          Length = 215

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LDLGTGTGA  LAL       + V  VD+S + +   + N + +    R    + D + 
Sbjct: 32  VLDLGTGTGA--LALTGARAGAQSVTAVDLSRRCVATTRLNFLLHRRPVRVH--RGDLYE 87

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  F +IV+NPPY+ S     L    R      S D G  G +    I DG   HL 
Sbjct: 88  PVRGRRFGLIVANPPYVPSE-TSVLPRHTRGR----SWDAGPTGRAILDRICDGAPEHLE 142

Query: 219 KDG 221
            DG
Sbjct: 143 DDG 145


>gi|320539203|ref|ZP_08038874.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia symbiotica str. Tucson]
 gi|320030841|gb|EFW12849.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia symbiotica str. Tucson]
          Length = 248

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G+G+G + L L + S     +  V++   A E A+ N   +   +R      D +
Sbjct: 50  RVLDIGSGSGLIALMLAQRSAAEVMIDAVELDEAAAEQARDNVQKSPWPQRIKVYAQDIY 109

Query: 159 SSVE---GLFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY E  + 
Sbjct: 110 YYAEHHAAQYDLIVSNPPYFEPAVA 134


>gi|296130592|ref|YP_003637842.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
 gi|296022407|gb|ADG75643.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
          Length = 515

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+LDLGTG G   L   + +     V  D+S +AL  A+      G+  +R    +    
Sbjct: 171 RVLDLGTGCGVQALHASRHAAHV--VATDLSPRALAFARFTTALAGLGPDRVSLREGSML 228

Query: 159 SSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             V G  FD++VSNPP+    ++   G +V  +D R   DGG  G    R +  GV   L
Sbjct: 229 EPVAGETFDLVVSNPPF----VITPRGADVPAYDYR---DGGRSGDDLVRDLVTGVGDVL 281

Query: 218 NKDGLCSV 225
              G+  +
Sbjct: 282 APGGVAQL 289


>gi|261401204|ref|ZP_05987329.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970]
 gi|269208782|gb|EEZ75237.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970]
          Length = 367

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + +A+  A++N    G+ ++ +  ++D F  +
Sbjct: 193 LDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               D+IV NPP++ +       +E   +DP  ++      L+ +   A    +HLN DG
Sbjct: 252 RA--DLIVCNPPWLPAKPTSA--VESALYDPDSAM------LAAFLRDA---PKHLNPDG 298


>gi|269796546|ref|YP_003316001.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542]
 gi|269098731|gb|ACZ23167.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542]
          Length = 549

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LDLGTG G   L   + +     V  DIS +AL  A  NA  +GV  R D       
Sbjct: 185 TRVLDLGTGCGIQALHASRHAQTV--VATDISERALRFAAFNAALDGV--RLDLRLGSML 240

Query: 159 SSVEGL-FDVIVSNPPYI 175
             V G  FD++VSNPP++
Sbjct: 241 EPVAGEEFDLVVSNPPFV 258


>gi|219670303|ref|YP_002460738.1| ribosomal protein L11 methyltransferase [Desulfitobacterium
           hafniense DCB-2]
 gi|254783300|sp|B8FUN2|PRMA_DESHD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|219540563|gb|ACL22302.1| ribosomal protein L11 methyltransferase [Desulfitobacterium
           hafniense DCB-2]
          Length = 312

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 30/186 (16%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYN-VRL------TLSSDTFEPRPETELL-VDSA 85
           QRF      V+ L  +       W+ ++  VR+        S +   P PE  +L +D  
Sbjct: 89  QRFPEWVLQVKGLTVQEEDWATSWKAYFKPVRIGRHFLIKPSWEEVTPLPEDIILELDPG 148

Query: 86  LAF-------------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +AF             +L    K D+ RI DLGTG+G + +A  K     + +  D+   
Sbjct: 149 MAFGTGTHATTSLCLETLEETVKPDM-RIFDLGTGSGILAIAAAKLGAQVEAI--DLDSV 205

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+++A+ N   N V++R    Q D  + ++G  D++V+N      +I D + + + D   
Sbjct: 206 AVKVAQENVELNQVADRISVRQGDLGTVLQGQADLVVAN------IIADVILMLIPDLKR 259

Query: 193 RISLDG 198
            +  DG
Sbjct: 260 IMKEDG 265


>gi|317123694|ref|YP_004097806.1| methyltransferase small [Intrasporangium calvum DSM 43043]
 gi|315587782|gb|ADU47079.1| methyltransferase small [Intrasporangium calvum DSM 43043]
          Length = 506

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 59/127 (46%), Gaps = 12/127 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTG G   L L   +     V  DIS +AL  A+ NA   G+    D  + D   
Sbjct: 168 RALDLGTGCGVQALHLAGHTGSI--VATDISERALAFARFNAALAGLD--VDLRRGDLLD 223

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  F +IVSNPP++ +   D    +V  ++ R   DGG  G +  RT+   V   L 
Sbjct: 224 PVAGERFSLIVSNPPFVITPRAD----DVPVYEYR---DGGRSGDAIVRTLVRTVRDALE 276

Query: 219 KDGLCSV 225
             G+  +
Sbjct: 277 PGGVAQL 283


>gi|259415189|ref|ZP_05739111.1| methyltransferase small [Silicibacter sp. TrichCH4B]
 gi|259349099|gb|EEW60853.1| methyltransferase small [Silicibacter sp. TrichCH4B]
          Length = 262

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   R+TL    F+P+      VD  L  +   +  R    +L+LG G G   L L    
Sbjct: 17  FLGGRITL----FQPKSGYRAGVDPVLLAAA--VNARPGQSVLELGCGAGQAFLCLAARV 70

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV-EGLFDVIVSNPPYIES 177
              K  GV++     E+A+ NA  N  +    T   SD  + + +  FD +++NPPY  +
Sbjct: 71  QDLKITGVELQAAYAELARRNAAENATAAHVATANLSDLPADLRQQRFDHVIANPPYYRA 130


>gi|226222880|ref|YP_002756987.1| hypothetical protein Lm4b_00272 [Listeria monocytogenes Clip81459]
 gi|225875342|emb|CAS04039.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 201

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + S
Sbjct: 62  KILDVGCGYGPMGLTVAKVFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDS 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|261378754|ref|ZP_05983327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685]
 gi|269144909|gb|EEZ71327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685]
          Length = 367

 Score = 44.7 bits (104), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G V  A+L +      +G D + +A+  A++N    G+ ++ +  ++D F  +
Sbjct: 193 LDIGTGSG-VLAAILAKQGISSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM 251

Query: 162 EGLFDVIVSNPPY--------IESVIVD----CLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               D+IV NPP+        IES + D     L   +RD    ++ DG I      R I
Sbjct: 252 RA--DLIVCNPPWLPAKPTSAIESALYDPDSAMLTAFLRDAPEHLNPDGEI------RLI 303

Query: 210 ADGVSRHLN 218
              ++ HL+
Sbjct: 304 ISDLAEHLH 312


>gi|308172559|ref|YP_003919264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM
           7]
 gi|307605423|emb|CBI41794.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM
           7]
 gi|328552324|gb|AEB22816.1| RNA methyltransferase, TrmA family protein [Bacillus
           amyloliquefaciens TA208]
 gi|328910668|gb|AEB62264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens LL3]
          Length = 458

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 34/185 (18%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61
           F+ R +       I++     D   +F    +IV+++     + I G      W + Y  
Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETSVIWGEEYIY 273

Query: 62  ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
               +V+  +S+ +F +  PE T++L D AL ++    E +    ++D   G G + L L
Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGKETVIDAYCGIGTISLFL 329

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168
            K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   EG+  D +
Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTL 385

Query: 169 VSNPP 173
           V +PP
Sbjct: 386 VVDPP 390


>gi|253576898|ref|ZP_04854223.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843765|gb|EES71788.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 251

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDL TG G + L LL      K  G++I  +  ++A+ +   NG++ R +  + D   
Sbjct: 49  KILDLCTGNGVIPL-LLSTRTEAKIEGIEIQPRLADMARRSVEMNGLTHRIEIREGDLRE 107

Query: 160 SV----EGLFDVIVSNPPYI 175
            V     G++D I  NPPY+
Sbjct: 108 LVRVTGHGVYDAITVNPPYM 127


>gi|296122425|ref|YP_003630203.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
 gi|296014765|gb|ADG68004.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
          Length = 390

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           IE  +  +I+DLG G+G V +A     P    + VD + +A+E  +  A  NG S     
Sbjct: 218 IEPMEQGQIVDLGCGSGGVAVAAALRHPELDVLAVDSNPRAIECTQWAAKENGTSRVQTR 277

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           L +   S      DV+ +NPPY  +  +  + +E      RI + GG
Sbjct: 278 LDATGKSLESNSVDVVYANPPYFSNYKIAGIFIETAF---RILIPGG 321


>gi|283851152|ref|ZP_06368436.1| methyltransferase small [Desulfovibrio sp. FW1012B]
 gi|283573548|gb|EFC21524.1| methyltransferase small [Desulfovibrio sp. FW1012B]
          Length = 259

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 10/84 (11%)

Query: 100 RILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT----- 152
           R LDLGTG G   L   L ++ P    +G+D     +E A+ NA   G+++RFD      
Sbjct: 41  RALDLGTGCGPAGLGWMLARQDPEATVLGLDKDPAMVEAARENARRLGLADRFDARLLDV 100

Query: 153 --LQSDWFSSVEGLFDVIVSNPPY 174
             L +D    V G  D++++NPPY
Sbjct: 101 RDLGTDA-GLVPGSCDLVLANPPY 123


>gi|253686645|ref|YP_003015835.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259534546|sp|C6DIJ9|PRMA_PECCP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|251753223|gb|ACT11299.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 295

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS     GG  GLS    T ADGV+ 
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLATQADGVAE 268


>gi|218438218|ref|YP_002376547.1| methyltransferase type 12 [Cyanothece sp. PCC 7424]
 gi|218170946|gb|ACK69679.1| Methyltransferase type 12 [Cyanothece sp. PCC 7424]
          Length = 242

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+ E ++D  ++   P +E     +IL+LG GTG + L LL   P  K V +D S + + 
Sbjct: 24  PKYEEVLDVIVSLVPPGVE-----QILELGCGTGELSLKLLNRYPKVKIVALDYSERMIT 78

Query: 136 IAKSNAVTNGVSERFDTLQSD 156
            A++  V  G S+R+  +Q D
Sbjct: 79  YAQTKIVDKGYSDRWKGVQLD 99


>gi|89895874|ref|YP_519361.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51]
 gi|122481887|sp|Q24SS5|PRMA_DESHY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|89335322|dbj|BAE84917.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 30/186 (16%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYN-VRL------TLSSDTFEPRPETELL-VDSA 85
           QRF      V+ L  +       W+ ++  VR+        S +   P PE  +L +D  
Sbjct: 89  QRFPEWVLQVKGLTVQEEDWATSWKAYFKPVRIGRHFLIKPSWEEVTPLPEDIILELDPG 148

Query: 86  LAF-------------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +AF             +L    K D+ RI DLGTG+G + +A  K     + +  D+   
Sbjct: 149 MAFGTGTHATTSLCLETLEETVKPDM-RIFDLGTGSGILAIAAAKLGAQVEAI--DLDSV 205

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+++A+ N   N V++R    Q D  + ++G  D++V+N      +I D + + + D   
Sbjct: 206 AVKVAQENVELNQVADRISVRQGDLGTVLQGQADLVVAN------IIADVILMLIPDLKR 259

Query: 193 RISLDG 198
            +  DG
Sbjct: 260 IMKEDG 265


>gi|313620910|gb|EFR92088.1| methyltransferase [Listeria innocua FSL S4-378]
          Length = 143

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 4   KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 63

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 64  VTANDYQAIISNPP 77


>gi|307299352|ref|ZP_07579153.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915148|gb|EFN45534.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 202

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 3/74 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDLG G GAV + L  E P  K    D++ +AL  +K NA  + +    D  + D FS 
Sbjct: 65  ILDLGCGYGAVGITLKLEHPDLKLHMSDVNTRALTFSKINARDHNILA--DIRKGDLFSP 122

Query: 161 VEGL-FDVIVSNPP 173
            E   FD I+SNPP
Sbjct: 123 WEKTSFDSILSNPP 136


>gi|260664919|ref|ZP_05865770.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US]
 gi|313472534|ref|ZP_07813024.1| methyltransferase domain protein [Lactobacillus jensenii 1153]
 gi|239529969|gb|EEQ68970.1| methyltransferase domain protein [Lactobacillus jensenii 1153]
 gi|260561402|gb|EEX27375.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US]
          Length = 203

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  NGV+   +   S  + +
Sbjct: 67  ILDVGCGYGPIGLFAAKKWPERQVDMVDVNERAMDLARKNAEVNGVTNA-NIFASSVYEN 125

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 126 VDKQYAMILTNPP 138


>gi|302384472|ref|YP_003820294.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
 gi|302195100|gb|ADL02671.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + +DLGTGTG + L L  ++      G++I     E+A+ +   N + E+   +  D   
Sbjct: 48  KAVDLGTGTGIIPLLLEAKNQGIHYTGLEIQEAMAEMARRSVALNHLEEKITIVTGDIKE 107

Query: 160 SVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +        FDV+ SNPPY+     D  GL+  D    I+
Sbjct: 108 ASRLFGAASFDVVTSNPPYMN----DSHGLKNPDLPKAIA 143


>gi|255016895|ref|ZP_05289021.1| hypothetical protein LmonF_01871 [Listeria monocytogenes FSL
           F2-515]
          Length = 184

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|269925374|ref|YP_003321997.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789034|gb|ACZ41175.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798]
          Length = 360

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 7/98 (7%)

Query: 82  VDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ++S +A+ + R+ +    DV  I++LG G+G + +  L+  P    VGVDI  +AL  A+
Sbjct: 190 INSTVAYVMARLSEPSAGDV--IVNLGCGSGTILIERLEMLPAKAVVGVDIDPEALACAR 247

Query: 139 SNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPY 174
            N    G++ + D L+ D  S+    G  DVI ++ P+
Sbjct: 248 RNVYAAGLTGKVDLLRGDMRSTGLNSGFADVIYADLPF 285


>gi|291243854|ref|XP_002741815.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 217

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVGVD 128
           +EP  +T LL+D AL      ++    +  +++G G G V     +LLK        G D
Sbjct: 19  YEPAEDTFLLLD-ALEKEFETLQNLRPLICVEVGCGAGVVITFLASLLKSDTLC--FGTD 75

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLG 184
           I+  A ++++  +  NG++   +T+ SD  ++++    GL DV++ NPPY+ +       
Sbjct: 76  INYNAAQLSQKTSNQNGMT--VNTIVSDLVNALQPRLNGLIDVLIFNPPYVLTP-----S 128

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRK 243
            EV   D   S  GGIDG      I   +   L+  G+  + I    K D +  I  S  
Sbjct: 129 EEVGSRDIVASWAGGIDGRQVIDRILPIIPTVLSPKGVFYLLILKENKQDEIEDIMNSHG 188

Query: 244 LFLVNAFKDYGGNDR--VLLFCR 264
             +    +   G +R  VL F R
Sbjct: 189 FEMAVVLQRRTGPERLSVLKFTR 211


>gi|149278374|ref|ZP_01884511.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
 gi|149230744|gb|EDM36126.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
          Length = 235

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
           D  RILD+GTGTG + L L +  P  +   V+I   A E A  N  ++  S R     + 
Sbjct: 37  DSGRILDIGTGTGVIALMLAQRFPLAQVDAVEIDGVAAERAGLNFRSSDFSSRTTAHHTS 96

Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
             D+ S+    +D+IVSNPP+    + D    EVR    R + +   DGL
Sbjct: 97  IMDYESTHP--YDLIVSNPPFF---VNDLKNPEVRKGIARHADEQFFDGL 141


>gi|169605047|ref|XP_001795944.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15]
 gi|111065483|gb|EAT86603.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15]
          Length = 301

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+  G+GA  + + +  P  + +G+D++ +AL +   NA   G    F   +SD +++
Sbjct: 115 VVDVCCGSGAGAIHMARTYPHAEVIGLDLNPRALSLGGVNARLAGTEVTFH--ESDLYAA 172

Query: 161 VEGLF-----DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVS 214
           V         D+IVSNPPYI S           + D  I  DGG + GL     I +   
Sbjct: 173 VPETLKSSGIDLIVSNPPYIASC-------PKNEEDLPIYADGGAEFGLDISLRIVEEGM 225

Query: 215 RHLNKDGLCSVEIGYNQKVD 234
           + L  +G+  V  G    VD
Sbjct: 226 KILASNGMIIVYTGVAIPVD 245


>gi|110834309|ref|YP_693168.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax
           borkumensis SK2]
 gi|110647420|emb|CAL16896.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax
           borkumensis SK2]
          Length = 416

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
            ++ DLG G G + +A+LK +P  +    D S  ALE A+ N     VS  F   +S   
Sbjct: 266 AKVADLGCGNGVIGMAVLKANPAARVTFCDESWLALESARDN-----VSRYFSDAESHFH 320

Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180
             D  + +E  FD I+ NPP+ +  +V
Sbjct: 321 LGDGLAGLEQRFDCILLNPPFHDGYVV 347


>gi|152973948|ref|YP_001373465.1| methyltransferase small [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022700|gb|ABS20470.1| methyltransferase small [Bacillus cytotoxicus NVH 391-98]
          Length = 199

 Score = 44.7 bits (104), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 5/87 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF +P I+      ILD+G G G + L+L KE    +   VD++ +ALE+AK NA  N  
Sbjct: 52  AFQMPDIDGD----ILDVGCGYGPIGLSLAKEFRGRRVHMVDVNERALELAKENAANN-N 106

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            E     QS+ +  V+G +  I+SNPP
Sbjct: 107 VENIRIFQSNVYEKVDGQYAAILSNPP 133


>gi|332706167|ref|ZP_08426236.1| methyltransferase domain protein [Lyngbya majuscula 3L]
 gi|332355004|gb|EGJ34475.1| methyltransferase domain protein [Lyngbya majuscula 3L]
          Length = 404

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F      +R+ +RILD G GTG     L+  +P    VG+D+S  AL++A+     
Sbjct: 41  AAYSFCTGHTPQREEIRILDAGCGTGVGTEYLVHLNPQASVVGIDLSAGALKVAQERCRR 100

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168
           +G     F  L       +EG FD+I
Sbjct: 101 SGADRVEFHHLSLYDVDQIEGQFDLI 126


>gi|229825148|ref|ZP_04451217.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC
           49176]
 gi|229790520|gb|EEP26634.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC
           49176]
          Length = 244

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTGTG + L L  ++      G++I  ++ ++A+ + V N ++   + +  D   
Sbjct: 48  RVIDLGTGTGILPLLLWAKTEGEHFTGLEIQEESADMARRSVVGNNIT-NIEIVDGD-IK 105

Query: 160 SVEGL-----FDVIVSNPPYI 175
           SV+ L     FDV+ SNPPY+
Sbjct: 106 SVDKLFKRQSFDVVTSNPPYM 126


>gi|218282061|ref|ZP_03488366.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989]
 gi|218216979|gb|EEC90517.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989]
          Length = 189

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 84/194 (43%), Gaps = 27/194 (13%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + +    +  +++D  L+F L ++++   +  L+LGT      + + K  P  + V ++ 
Sbjct: 5   EQYAKEHQVPIMMDDGLSFLLEKLQENQCLSFLELGTAIARTSIEVAKLDPRMRVVTIER 64

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           + + +  AK N   +G+S++   ++ D    +V+G+FD I           +D    + +
Sbjct: 65  NSEMIVQAKKNIEESGLSDQITLIEGDALEVNVDGMFDCI----------FIDAAKAQYQ 114

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKV-DVVRIFESRKLFL 246
            F  +  +    +G+         VS ++N  GL    E+  N+    +VR       +L
Sbjct: 115 RFFEKYCMHLNENGII--------VSDNMNFHGLVQHPELTQNRNTRQLVRKIHDYHTYL 166

Query: 247 VN------AFKDYG 254
            N      AF DYG
Sbjct: 167 ANLSDYETAFYDYG 180


>gi|307591966|ref|YP_003899557.1| methyltransferase type 11 [Cyanothece sp. PCC 7822]
 gi|306985611|gb|ADN17491.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822]
          Length = 208

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P + ++V   L  +  ++   DVV   DLG+G G + ++  K     KGVG+DI  K ++
Sbjct: 55  PSSNVVVQEMLRIA--QVTSSDVV--YDLGSGDGRIVISAAKNY-GAKGVGIDIDPKLIQ 109

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            AK+NA   GVS+R   ++ D+F +
Sbjct: 110 EAKANAREAGVSDRVKFIEQDFFKA 134


>gi|254386203|ref|ZP_05001514.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1]
 gi|194345059|gb|EDX26025.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1]
          Length = 512

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 16/138 (11%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   LDLGTG+G   L     +   +    D++ +ALE  +     +G  E  + L    
Sbjct: 165 VATALDLGTGSGIQALHAAHHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGSL 221

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V +  +D+IVSNPP+   VI     L  R        DGG+ G    RT+      H
Sbjct: 222 FEPVGDATYDLIVSNPPF---VISPGARLTYR--------DGGMSGDDLCRTLVQEAGAH 270

Query: 217 LNKDGLCSVEIGYNQKVD 234
           LN  G     +G  Q V+
Sbjct: 271 LNPGGYAQF-LGNWQHVE 287


>gi|269126609|ref|YP_003299979.1| methyltransferase small [Thermomonospora curvata DSM 43183]
 gi|268311567|gb|ACY97941.1| methyltransferase small [Thermomonospora curvata DSM 43183]
          Length = 228

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 26/122 (21%)

Query: 62  NVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++RLT     F P    P T +L+++  A   P  E      +LD+G G G + LA+   
Sbjct: 44  HLRLTTDRGVFSPDRIDPGTRILLETVPA---PPAEGD----LLDVGCGYGPIALAMALR 96

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSN 171
           SP  +  GVD++ +AL++A+ NA T G+        E+ D             F  + SN
Sbjct: 97  SPRARVYGVDVNERALQLARLNARTAGIGNASFHRPEQIDPAMR---------FAALWSN 147

Query: 172 PP 173
           PP
Sbjct: 148 PP 149


>gi|225570059|ref|ZP_03779084.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM
           15053]
 gi|225161529|gb|EEG74148.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM
           15053]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTGTG + + L  ++   +  G++I  ++ ++A+ + + NG+ ++ D +  D     
Sbjct: 50  LDLGTGTGILPILLEAKNEGSRYAGLEIQEESADMARRSILHNGLEDKIDIVTGD-IREA 108

Query: 162 EGL-----FDVIVSNPPYI 175
            GL     F VI +NPPY+
Sbjct: 109 AGLFGAASFHVITTNPPYM 127


>gi|197301950|ref|ZP_03167014.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC
           29176]
 gi|197299018|gb|EDY33554.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC
           29176]
          Length = 253

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L     ++ + + V  LD+GTG G + + L  ++      G++I     E+A+ + 
Sbjct: 39  VDAVLLSDFAKVRQGETV--LDMGTGNGIIPVLLAGKTEGKHFTGLEIQADTAEMAQRSV 96

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             N + +R + +  D   +        FDVI +NPPY+
Sbjct: 97  RYNHLEDRVEIVTGDIKEAATIFKPAFFDVITTNPPYM 134


>gi|193216593|ref|YP_001999835.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1]
 gi|193001916|gb|ACF07131.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1]
          Length = 263

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 11/90 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+V  IL++GT  GA+ + +   +P      V+I   A+EIA  N   NG+ ++   ++ 
Sbjct: 42  RNVSNILEVGTNNGALAIFVASRNPKITIDAVEIQHDAIEIANENVKMNGLDKQIRVIEG 101

Query: 156 DWF-----------SSVEGLFDVIVSNPPY 174
           D+            + +   +  I++NPPY
Sbjct: 102 DFKKYAKDYAYRCGNQMAKKYSSIIANPPY 131


>gi|16077174|ref|NP_387987.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221307918|ref|ZP_03589765.1| hypothetical protein Bsubs1_00550 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312239|ref|ZP_03594044.1| hypothetical protein BsubsN3_00545 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317173|ref|ZP_03598467.1| hypothetical protein BsubsJ_00550 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321436|ref|ZP_03602730.1| hypothetical protein BsubsS_00550 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|586914|sp|P37872|YBXB_BACSU RecName: Full=Uncharacterized protein ybxB; AltName: Full=ORF23;
           AltName: Full=P23
 gi|402362|gb|AAB00971.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|2632373|emb|CAB11882.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+DS   F  P +E      ILD+G G G + L+L  +        +D++ +A+E++
Sbjct: 46  SRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
             NA  NG++      QSD FS+V+    F  I++NPP
Sbjct: 99  NENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPP 135


>gi|313625354|gb|EFR95147.1| methyltransferase [Listeria innocua FSL J1-023]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|302656356|ref|XP_003019932.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517]
 gi|291183708|gb|EFE39308.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517]
          Length = 371

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 35/162 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106
           + +  ILG + F ++ +        PRP+TE      +    +  R+     +RI+D+ T
Sbjct: 70  KPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLTENRLNPTRSIRIIDICT 129

Query: 107 GTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVTNG--VSERFDT----- 152
           GTG + L   +LL  S P    +GVDIS  AL +AK N    + NG  +S   D      
Sbjct: 130 GTGCIPLLLHSLLAPSIPTISIIGVDISATALSLAKKNLEYNIGNGTLLSRARDEIHFVH 189

Query: 153 --------LQSDWFSSVEGL-----------FDVIVSNPPYI 175
                   L+SD     E L            D+++SNPPYI
Sbjct: 190 ADILDPCYLESDGSELGEMLSRSNQGGHSKGLDLLISNPPYI 231


>gi|296328879|ref|ZP_06871390.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154000|gb|EFG94807.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 223

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    +G+DI  + +E A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIERANK 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
               N + +  +F+ +    +      FDVI+SNPPY++
Sbjct: 87  ALKLNRIEKNIQFECMDVKEYKK-SNYFDVIISNPPYMD 124


>gi|19704242|ref|NP_603804.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714472|gb|AAL95103.1| Ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 223

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    +G+DI  + +E A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIERANK 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
               N + +  +F+ +    +      FDVI+SNPPY++
Sbjct: 87  ALKLNRIEKNIQFECMDVKEYKK-SNYFDVIISNPPYMD 124


>gi|16799361|ref|NP_469629.1| hypothetical protein lin0284 [Listeria innocua Clip11262]
 gi|16412713|emb|CAC95517.1| lin0284 [Listeria innocua Clip11262]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|296330132|ref|ZP_06872614.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673376|ref|YP_003865048.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152721|gb|EFG93588.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411620|gb|ADM36739.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 459

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75
           + D   +F    +IV+++     + I G      W + Y      +V+  +S+ +F +  
Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNDTNVIWGEEYIYDLIGDVKFAISARSFYQVN 292

Query: 76  PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE T++L D AL ++    E +    ++D   G G + L L K++   K  GV+I  +A+
Sbjct: 293 PEQTKVLYDKALEYA----ELKGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346

Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           E AK NA  NG++         +T+   W+   EG+  D +V +PP
Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTLVVDPP 390


>gi|238855365|ref|ZP_04645677.1| methyltransferase small domain protein [Lactobacillus jensenii
           269-3]
 gi|282934595|ref|ZP_06339842.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
 gi|238832026|gb|EEQ24351.1| methyltransferase small domain protein [Lactobacillus jensenii
           269-3]
 gi|281301347|gb|EFA93644.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
          Length = 199

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  NGV+   +   S  + +
Sbjct: 63  ILDVGCGYGPIGLFAAKKWPERQVDMVDVNERAMDLARKNAEVNGVTNA-NIFASSVYEN 121

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 122 VDKQYAMILTNPP 134


>gi|84496250|ref|ZP_00995104.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649]
 gi|84383018|gb|EAP98899.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649]
          Length = 370

 Score = 44.3 bits (103), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E R   R +DL  G+G V  AL    P    +  D S  A+   ++ A  NGVS+R + +
Sbjct: 222 EMRQAERAIDLACGSGVVAAALALARPELHVLATDQSAAAIASTRATAAANGVSDRVEVV 281

Query: 154 QSDWFSSVE-GLFDVIVSNPPY 174
           ++D   +V      +IV NPP+
Sbjct: 282 RADGLETVATASAQLIVLNPPF 303


>gi|332670095|ref|YP_004453103.1| methyltransferase small [Cellulomonas fimi ATCC 484]
 gi|332339133|gb|AEE45716.1| methyltransferase small [Cellulomonas fimi ATCC 484]
          Length = 203

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G V L+L  ESP  +   VD++ +AL++ + NA   G++     L  D    
Sbjct: 64  LLDLGCGWGPVALSLALESPDARVWAVDVNERALDLVRRNAAALGLANVVAALPDDVPDD 123

Query: 161 VEGLFDVIVSNPP 173
           V   F  I SNPP
Sbjct: 124 VR--FATIRSNPP 134


>gi|297156628|gb|ADI06340.1| hypothetical protein SBI_03219 [Streptomyces bingchenggensis BCW-1]
          Length = 499

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 32/53 (60%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           D  R+LDLG G G +  ALLKE+ F + VGVD+S +AL  A      + + ER
Sbjct: 297 DAARVLDLGCGQGQLVGALLKEARFTEIVGVDVSMRALNEAARRLRLDRMGER 349


>gi|326793495|ref|YP_004311315.1| ribosomal RNA small subunit methyltransferase C [Marinomonas
           mediterranea MMB-1]
 gi|326544259|gb|ADZ89479.1| Ribosomal RNA small subunit methyltransferase C [Marinomonas
           mediterranea MMB-1]
          Length = 353

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 13/109 (11%)

Query: 82  VDSALAFSLPRIEKR------DVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCK 132
           +D   A  L ++EK       +  RILD G G G + + L K +    G  V   D S  
Sbjct: 188 LDKGTALLLEQLEKHRFMSGVNQARILDFGCGDGVISMWLHKRT----GANVTSLDDSAL 243

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           AL+  +     N  ++   T+ S+    V+G F+ +V+NPP+   +  D
Sbjct: 244 ALKATELTFAENDATDSLTTIASNGLKHVKGRFNYVVTNPPFHTGINTD 292


>gi|254429347|ref|ZP_05043054.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
 gi|196195516|gb|EDX90475.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
          Length = 388

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G + LA L+ SP  +    D S  ALE A+ N      + +      D   
Sbjct: 246 RVLDLGCGNGVIGLAALQASPGAEMTFCDESWLALESARDNVSRYFPNRQCHFHHGDGLV 305

Query: 160 SVEGLFDVIVSNPPYIESVIV 180
            +E  FD I+ NPP+ +  +V
Sbjct: 306 GLEREFDCILLNPPFHDGHVV 326


>gi|311067148|ref|YP_003972071.1| putative RNA methyltransferase [Bacillus atrophaeus 1942]
 gi|310867665|gb|ADP31140.1| putative RNA methyltransferase [Bacillus atrophaeus 1942]
          Length = 460

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75
           + D   +F    +IV+++     + I G      W + Y      +V+  +S+ +F +  
Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVN 292

Query: 76  PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE T++L D AL ++    E +    ++D   G G + L L K++   K  GV+I  +A+
Sbjct: 293 PEQTKVLYDKALEYA----ELKGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346

Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           E AK NA  NG++         +T+   W+   EG+  D +V +PP
Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGITADTLVVDPP 390


>gi|295097892|emb|CBK86982.1| Predicted O-methyltransferase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G   L L + +     +  V++  +A   A  NA  +  ++R     +D
Sbjct: 45  VKRILDIGTGSGLQALMLAQRTEEHVTIDAVELDPQAARQASENAADSPWADRIRVECAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W S     +D+IVSNPPY
Sbjct: 105 VLTWASEQTARYDLIVSNPPY 125


>gi|262831243|sp|C4LCN4|TRMN6_TOLAT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   RILD+GTGTG + L L + +     +  V++   A++ A+ N   +   ER   ++
Sbjct: 36  RGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRERIRVIR 95

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
            D  +     +D+I+SNPPY
Sbjct: 96  HDIRTFQAPHYDLIISNPPY 115


>gi|237807744|ref|YP_002892184.1| methyltransferase small [Tolumonas auensis DSM 9187]
 gi|237500005|gb|ACQ92598.1| methyltransferase small [Tolumonas auensis DSM 9187]
          Length = 265

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   RILD+GTGTG + L L + +     +  V++   A++ A+ N   +   ER   ++
Sbjct: 64  RGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRERIRVIR 123

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
            D  +     +D+I+SNPPY
Sbjct: 124 HDIRTFQAPHYDLIISNPPY 143


>gi|205372078|ref|ZP_03224895.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus coahuilensis m4-4]
          Length = 200

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F LP ++       LD+G G G + L+L KE    +   VD++ +AL +A+ NAV N V 
Sbjct: 53  FKLPAVDGP----FLDVGCGYGPIGLSLAKEDENRQVHMVDVNERALSLAEENAVLNNV- 107

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           +     +SD   SV E  F  I++NPP
Sbjct: 108 QNVSIYRSDTLHSVKEESFAAILTNPP 134


>gi|108798335|ref|YP_638532.1| methyltransferase small [Mycobacterium sp. MCS]
 gi|119867432|ref|YP_937384.1| methyltransferase small [Mycobacterium sp. KMS]
 gi|108768754|gb|ABG07476.1| methyltransferase small [Mycobacterium sp. MCS]
 gi|119693521|gb|ABL90594.1| methyltransferase small [Mycobacterium sp. KMS]
          Length = 507

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 16/139 (11%)

Query: 89  SLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           SL R   R+ V R LDLGTG G   L L   S  ++ V  D + +AL +A + A  NG+S
Sbjct: 156 SLARAVVREPVGRALDLGTGCGIQALHLDAHS--YQIVATDTNERALALAAATARLNGMS 213

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +D      F  V G  FD+IVSNPP++       +G   RD+   I  D G+ G +  
Sbjct: 214 --WDLRCGSLFEPVAGERFDLIVSNPPFV-------VGAGARDY---IYRDSGMVGDALC 261

Query: 207 RTIADGVSRHLNKDGLCSV 225
           R + + V  HL   G   V
Sbjct: 262 RNLIEQVGDHLEPGGTAHV 280


>gi|1246430|emb|CAA48793.1| orfB [Clostridium acetobutylicum]
          Length = 298

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%)

Query: 57  WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95
           W+ +Y       R+ +    + + P+  E  L +D  +AF             +L R   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V+   + L  
Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D+IV+N      +I D + + + D +  +  DG        +  A+ V  
Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286

Query: 216 HLNKDGLCSVEI 227
           +L K+    +E+
Sbjct: 287 NLKKNKFEIIEV 298


>gi|291547630|emb|CBL20738.1| Predicted O-methyltransferase [Ruminococcus sp. SR1/5]
          Length = 246

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+++ +V   LD+GTGTG + + L   +      G++I  +  E+A  + 
Sbjct: 32  MDAVLLSGFARVKRGEVA--LDMGTGTGIIPILLSDRTDGEHFTGLEIQHECAEMADRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
             NG+ +R   ++ D   +        FDV+  NPPY+
Sbjct: 90  RYNGLEDRVRIVEGDIREAAGIFGAASFDVVTCNPPYM 127


>gi|160936945|ref|ZP_02084309.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440135|gb|EDP17882.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
           BAA-613]
          Length = 260

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLGTGTG + + L  ++      G++I  ++ ++A+ +   N +  + D +  D   
Sbjct: 63  KVLDLGTGTGIIPILLTAKTEGSHFTGLEIQEESADMARRSVAYNHLEGKVDIVTGDIVE 122

Query: 160 SVE----GLFDVIVSNPPYI 175
           +        FDV+ +NPPY+
Sbjct: 123 ASRLFALASFDVVTTNPPYM 142


>gi|262191214|ref|ZP_06049413.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93]
 gi|262032916|gb|EEY51455.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93]
          Length = 240

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 LPSKR--FAAIICNPPYFNS 123


>gi|38233996|ref|NP_939763.1| putative transferase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200258|emb|CAE49942.1| Putative transferase [Corynebacterium diphtheriae]
          Length = 511

 Score = 44.3 bits (103), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 15/135 (11%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L    +  V  +LDLGTG+G   L  L+ +        D+  +AL+ A+  A   G    
Sbjct: 152 LATTPRSPVNSVLDLGTGSGVQALGQLRHARSV--TATDVHPRALDFAE--ATFAGAHFD 207

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + L   WF  ++   FD IV+NPP+    +V    +E    D  + LDG  +      T
Sbjct: 208 VEILDGSWFEPIKNRKFDRIVANPPF----VVGPPEIEHVYRDSGLDLDGATE------T 257

Query: 209 IADGVSRHLNKDGLC 223
           +  G   HL+ +G  
Sbjct: 258 VVRGAVDHLHSNGTA 272


>gi|332559213|ref|ZP_08413535.1| methyltransferase small [Rhodobacter sphaeroides WS8N]
 gi|332276925|gb|EGJ22240.1| methyltransferase small [Rhodobacter sphaeroides WS8N]
          Length = 253

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G+++      +A+ NA  NGV+   + ++ D  + 
Sbjct: 47  VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAM 104

Query: 161 VEGL---FDVIVSNPPYIES 177
              L   FD +++NPPY  +
Sbjct: 105 PAALRQSFDHVIANPPYYPA 124


>gi|328543734|ref|YP_004303843.1| methyltransferase small [polymorphum gilvum SL003B-26A1]
 gi|326413478|gb|ADZ70541.1| Methyltransferase small [Polymorphum gilvum SL003B-26A1]
          Length = 365

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 15/134 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R+  +   R LDL  G G   L L       + V V+I+  A  +A+ NA  NG+ ER  
Sbjct: 131 RLSAKPGDRALDLCAGPGIQALRLAAMG--AEVVAVEINPVAASLAQLNAAANGLGERIS 188

Query: 152 TLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRT 208
                 + +V     FD++ +NPP           L V D  P   +  GG DGLS  R 
Sbjct: 189 VRIGSLYQAVGARERFDLVSANPPL----------LPVPDNVPYPFVGHGGPDGLSITRR 238

Query: 209 IADGVSRHLNKDGL 222
           I DG+   L++ G+
Sbjct: 239 ILDGLPGVLSERGV 252


>gi|110003975|emb|CAK98315.1| hsdm protein typeIrestriction enzyme [Spiroplasma citri]
          Length = 509

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 14/109 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+P ++LL        L    K ++  + D   G+G++ L + KE       G ++  
Sbjct: 198 YTPQPVSKLLA------KLVSQGKTEIKTVYDPTCGSGSLLLRVYKELKIGHLYGQELKT 251

Query: 132 KALEIAKSNAVTNGVS-ERF-----DTLQSDWFSSVEGLFDVIVSNPPY 174
            +  IA+ N + +G+   +F     DTL+ D F   E  F++IV+NPPY
Sbjct: 252 NSYNIARMNMMLHGLKYNKFNIYNGDTLEDDGFKGQE--FEIIVANPPY 298


>gi|15894566|ref|NP_347915.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
           ATCC 824]
 gi|18314338|sp|P45558|PRMA_CLOAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|15024213|gb|AAK79255.1|AE007641_1 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
           824]
 gi|325508698|gb|ADZ20334.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
           EA 2018]
          Length = 311

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 30/192 (15%)

Query: 57  WRDFYN-----VRLTLSS--DTFEPRP-ETELLVDSALAF-------------SLPRIEK 95
           W+ +Y       R+ +    + + P+  E  L +D  +AF             +L R   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V+   + L  
Sbjct: 176 EDA-EVFDIGTGSGILAIAAAKLNA-KKVLGVDLDSVAVKAAKENIQYNNVN-NIEILHG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D+IV+N      +I D + + + D +  +  DG        +  A+ V  
Sbjct: 233 NLMEVVQGKADIIVAN------IIADVINILIPDINKFLKTDGYFISSGIIKDRAEDVIE 286

Query: 216 HLNKDGLCSVEI 227
           +L K+    +E+
Sbjct: 287 NLKKNKFEIIEV 298


>gi|84684942|ref|ZP_01012842.1| hypothetical protein 1099457000245_RB2654_03499 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667277|gb|EAQ13747.1| hypothetical protein RB2654_03499 [Rhodobacterales bacterium
           HTCC2654]
          Length = 402

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA L        + VD S  AL++A   A   GV++RFDT Q D F
Sbjct: 228 ARVLDVFSHVGGFSLAALANG-ATTALAVDGSQPALDLATQGAEATGVADRFDTRQGDAF 286

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      FD+++ +PP
Sbjct: 287 DVLTSLGEAGEVFDMVICDPP 307


>gi|325286600|ref|YP_004262390.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
           7489]
 gi|324322054|gb|ADY29519.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
           7489]
          Length = 245

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 19/155 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------FDTL 153
           ILD+G GTG + L L + S       +++   A E   +N   +  ++R       FD  
Sbjct: 41  ILDIGAGTGIIALMLAQRSAADNIEAIELDADAYEQCTNNFEASDWADRLFCFHAGFDEF 100

Query: 154 QSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             ++    +  + L+D+IVSNPP+    +    G + RD       +   +    +  + 
Sbjct: 101 VDEYATDETEEDELYDLIVSNPPFYAEEVTS--GNKARD-------NARQNTSLPFSELV 151

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            GV++ L  +G  +  I Y ++ + +++ E+ KL+
Sbjct: 152 SGVAKLLTTNGRFATIIPYKEEEEFIKLAENFKLY 186


>gi|296127792|ref|YP_003635044.1| N-6 DNA methylase [Brachyspira murdochii DSM 12563]
 gi|296019608|gb|ADG72845.1| N-6 DNA methylase [Brachyspira murdochii DSM 12563]
          Length = 405

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 11/107 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDI 129
           F P+   ELL+   ++ S    +K+D V+ILD   G+G   L+  +   +P   G  +D 
Sbjct: 28  FTPKSIRELLLKKLISIS----DKKDNVKILDPACGSGEFILSFKEYFNNPHLYGFEIDE 83

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           S   + I+K   + N   +  DTL+ D   S++  +D ++ NPPY E
Sbjct: 84  SL--VSISKK-LINNADIKCIDTLKIDIEKSIK--YDYVIGNPPYFE 125


>gi|315275374|ref|ZP_07869513.1| methyltransferase [Listeria marthii FSL S4-120]
 gi|313615699|gb|EFR88991.1| methyltransferase [Listeria marthii FSL S4-120]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|256544625|ref|ZP_05471997.1| methylase [Anaerococcus vaginalis ATCC 51170]
 gi|256399514|gb|EEU13119.1| methylase [Anaerococcus vaginalis ATCC 51170]
          Length = 376

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176
           +G DIS KA+E+AK+NA+  GV E    L  D+   +++  F + +SNPPY E
Sbjct: 254 LGSDISKKAIELAKNNALNAGVYEDITFLNKDFKDINLKNNFGIFISNPPYGE 306


>gi|170289516|ref|YP_001739754.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
 gi|226710126|sp|B1L841|PRMA_THESQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|170177019|gb|ACB10071.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
          Length = 264

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWF 158
           +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V    D L   SD  
Sbjct: 133 VLDVGCGTGILAIAA-KKLGASQVVAVDVDEQAVEVAEENVRKNDV----DVLVKWSDLL 187

Query: 159 SSVEGLFDVIVSN 171
           S VEG FD++VSN
Sbjct: 188 SDVEGTFDIVVSN 200


>gi|110004783|emb|CAK99117.1| probable adenine-specific dna-methyltransferase hsdm subunit
           transmembrane protein [Spiroplasma citri]
          Length = 517

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 14/109 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+P ++LL        L    K ++  + D   G+G++ L + KE       G ++  
Sbjct: 206 YTPQPVSKLLA------KLVSQGKTEIKTVYDPTCGSGSLLLRVYKELKIGHLYGQELKT 259

Query: 132 KALEIAKSNAVTNGVS-ERF-----DTLQSDWFSSVEGLFDVIVSNPPY 174
            +  IA+ N + +G+   +F     DTL+ D F   E  F++IV+NPPY
Sbjct: 260 NSYNIARMNMMLHGLKYNKFNIYNGDTLEDDGFKGQE--FEIIVANPPY 306


>gi|77464322|ref|YP_353826.1| N-6 adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
 gi|77388740|gb|ABA79925.1| N-6 Adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
          Length = 253

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G+++      +A+ NA  NGV+   + ++ D  + 
Sbjct: 47  VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAM 104

Query: 161 VEGL---FDVIVSNPPYIES 177
              L   FD +++NPPY  +
Sbjct: 105 PAALRQSFDHVIANPPYYPA 124


>gi|169351613|ref|ZP_02868551.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552]
 gi|169291835|gb|EDS73968.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552]
          Length = 249

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +DV +I+D GT   A+ L L + +  P    +GV+I  +A+E+AK N   N +  +   +
Sbjct: 46  KDVKKIVDFGTNNAAIPLILSRRTNKPI---IGVEIQKEAVELAKKNITLNSLDNQIKIV 102

Query: 154 QSDWFSSVEGLFDV--IVSNPPY 174
            SD    V     V  +V NPP+
Sbjct: 103 HSDIKEFVNDSIKVGLVVCNPPF 125


>gi|163787262|ref|ZP_02181709.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1]
 gi|159877150|gb|EDP71207.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1]
          Length = 237

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 14/148 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +   ILDLG GTG + L L + S       ++I   A E    N   +  ++R     
Sbjct: 35  KENPFSILDLGAGTGILSLMLAQRSSAQNIEAIEIDADAYEQCSENFENSPWADRLFCYH 94

Query: 155 S---DWFSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           +   ++   VE  FD+I+ NPP Y E    D    ++  F+  +  +  I     Y T+ 
Sbjct: 95  ASLLEFVKEVEDKFDLIICNPPFYSEDYKTDNKARDLARFNDAMPFEHLI-----YATL- 148

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                 L+ DG+ SV I Y ++  ++ +
Sbjct: 149 ----NLLSDDGIFSVVIPYKEEEKLIEL 172


>gi|111023624|ref|YP_706596.1| anthranilate synthase component II and I/ aminodeoxychorismate
           synthase [Rhodococcus jostii RHA1]
 gi|110823154|gb|ABG98438.1| anthranilate synthase component II and I/ aminodeoxychorismate
           synthase [Rhodococcus jostii RHA1]
          Length = 960

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 20/182 (10%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR  TEL++  ALA     I       ++DL TG+GA+ LA+           VD    A
Sbjct: 729 PRANTELVLAEALA----DISHVTTPVVVDLCTGSGAIALAIAHARADAGVHAVDADPTA 784

Query: 134 LEIAKSN-------AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI---ESVIVDCL 183
           L +A+ N         +  V         +  S ++G  D++++ PP I   E +   C 
Sbjct: 785 LNVARRNIERQIRLGESPIVLHETAVTTPNLLSGLDGTADLVLARPPCIPDDEDLPSQC- 843

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           G   R      +L  G DGL   R      +R L+  G   VE   ++   V+ + E  K
Sbjct: 844 GEYCRR-----ALVSGTDGLKLARQTIVAAARLLHAGGSLVVEHRPDRYTTVLALLEGNK 898

Query: 244 LF 245
           LF
Sbjct: 899 LF 900


>gi|41615032|ref|NP_963530.1| hypothetical protein NEQ238 [Nanoarchaeum equitans Kin4-M]
 gi|40068756|gb|AAR39091.1| NEQ238 [Nanoarchaeum equitans Kin4-M]
          Length = 175

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 21/106 (19%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  +T LL+  A  F+  +I        L++G G+G +   LLK+   F   GV+I  
Sbjct: 4   YEPAEDTFLLLKWAKKFAKGKI--------LEIGVGSGYILENLLKKG--FDAYGVEIDK 53

Query: 132 KALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYI 175
             L+  K         E+F      SD FS+V   +D+I+ NPPY+
Sbjct: 54  DVLKYLK---------EKFKDRVWYSDLFSNVNDKYDLIIFNPPYL 90


>gi|312865348|ref|ZP_07725576.1| type I restriction-modification system, M subunit [Streptococcus
           downei F0415]
 gi|311099459|gb|EFQ57675.1| type I restriction-modification system, M subunit [Streptococcus
           downei F0415]
          Length = 533

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 94/237 (39%), Gaps = 52/237 (21%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+   AL   + R E +    + D   G+G++ L   K S     V   G +
Sbjct: 199 YTPQPVAKLMTQIAL---MGR-EDKQGFSLYDPTMGSGSLLLNAKKYSHKPNTVAYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY      D 
Sbjct: 255 LNTSTFNLARMNMILHGVPIENQKLHNADTLDEDWPTQEPTNFDAVLMNPPYSAKWSADA 314

Query: 183 LGLEVRDFDP--------------------RISLDGGIDG--LSH---YRTIADG-VSRH 216
             L+   F P                     +  DGG+    L H   +R  A+G + +H
Sbjct: 315 GFLQDPRFSPFGKLAPKSKADFAFLLHGYFHLKQDGGVMAIVLPHGVLFRGNAEGAIRKH 374

Query: 217 LNKDGLCSVEIG------YNQKVDVVRIF-----ESRKLFLVNAFKDY--GGNDRVL 260
           L ++G     IG      +N  +    I      + R ++ ++A K++  G N  ++
Sbjct: 375 LLEEGAIDTVIGLPANIFFNTSIPTTVIILKKDRQERDVYFIDASKEFTKGKNQNIM 431


>gi|255025584|ref|ZP_05297570.1| hypothetical protein LmonocytFSL_03220 [Listeria monocytogenes FSL
           J2-003]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|115372133|ref|ZP_01459444.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1]
 gi|310818836|ref|YP_003951194.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|115370835|gb|EAU69759.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1]
 gi|309391908|gb|ADO69367.1| Methyltransferase [Stigmatella aurantiaca DW4/3-1]
          Length = 321

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 37  FLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           +LTN  +RSL +  S+   L   D Y    TL  D+    P+T     +AL   +P   +
Sbjct: 91  YLTNGWLRSLVRFSSLGEGLYLHDAYP---TLGEDSVFFGPDTYRF--AALLARVPGKFQ 145

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V    DLG G+GA  L++         V  D+S +AL  ++ NA  N   +  + L S
Sbjct: 146 RAV----DLGCGSGAGGLSMGARVGSL--VLSDVSTRALRFSRINAALNEAPQ-VEFLAS 198

Query: 156 DWFSSVEGLFDVIVSNPPYI 175
           D    + G  D++++NPPY+
Sbjct: 199 DGLRGIPGGVDLVMANPPYL 218


>gi|284028566|ref|YP_003378497.1| methyltransferase small [Kribbella flavida DSM 17836]
 gi|283807859|gb|ADB29698.1| methyltransferase small [Kribbella flavida DSM 17836]
          Length = 481

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG G   L L   +     V  D++ +AL++ +  A  N +    D      +  V
Sbjct: 159 LDLGTGCGIQALHLADRANHL--VATDVNPRALQLTRWTAALNRIE--LDVRDGSLYEPV 214

Query: 162 EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            G  FD+IVSNPPY+ +   D   L  R+         G  G S    +     +HL + 
Sbjct: 215 AGQRFDLIVSNPPYVIAPPSDG-KLTYRET--------GFAGDSVVEQLVRQAPQHLTEG 265

Query: 221 GLCSV 225
           G C +
Sbjct: 266 GWCQL 270


>gi|16802302|ref|NP_463787.1| hypothetical protein lmo0256 [Listeria monocytogenes EGD-e]
 gi|224502450|ref|ZP_03670757.1| hypothetical protein LmonFR_08004 [Listeria monocytogenes FSL
           R2-561]
 gi|255028588|ref|ZP_05300539.1| hypothetical protein LmonL_04186 [Listeria monocytogenes LO28]
 gi|16409621|emb|CAD00783.1| lmo0256 [Listeria monocytogenes EGD-e]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|227550698|ref|ZP_03980747.1| methyltransferase [Enterococcus faecium TX1330]
 gi|293379424|ref|ZP_06625568.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
 gi|227180159|gb|EEI61131.1| methyltransferase [Enterococcus faecium TX1330]
 gi|292641947|gb|EFF60113.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
          Length = 210

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 55  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E+ D  QS+ +  + E  +  IVSNPP
Sbjct: 109 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 144


>gi|111018616|ref|YP_701588.1| adenine specific DNA-methyltransferase [Rhodococcus jostii RHA1]
 gi|110818146|gb|ABG93430.1| possible adenine specific DNA-methyltransferase [Rhodococcus jostii
           RHA1]
          Length = 377

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            +  D+GTGTG V  A+L      K +  ++   AL  A++N    G   +   +++D F
Sbjct: 195 TQAFDIGTGTG-VLAAVLAHRGVEKVIATELDANALACARANLDRLGYGGQVQVVETDLF 253

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              EG   ++V NPP+I +     +   + D D R+ L G + GL+ +
Sbjct: 254 P--EGRAPLVVCNPPWIPARPTSPIEYAIYDPDSRM-LRGFLGGLAEH 298


>gi|323143361|ref|ZP_08078049.1| methyltransferase small domain protein [Succinatimonas hippei YIT
           12066]
 gi|322416879|gb|EFY07525.1| methyltransferase small domain protein [Succinatimonas hippei YIT
           12066]
          Length = 353

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ LDLG G G + L L K     KG  V   DIS +AL +A+ NA  N + E  +   S
Sbjct: 216 LKALDLGCGCGIIGLYLAK-----KGANVTFSDISAEALFLAELNAKENDLKESCEFKAS 270

Query: 156 DWFSSVEGLFDVIVSNPPYIESV 178
                  G FDVI +NPP+ E +
Sbjct: 271 FMLDDAPG-FDVIATNPPFHEGI 292


>gi|126725275|ref|ZP_01741117.1| Predicted SAM-dependent methyltransferase [Rhodobacterales
           bacterium HTCC2150]
 gi|126704479|gb|EBA03570.1| Predicted SAM-dependent methyltransferase [Rhodobacterales
           bacterium HTCC2150]
          Length = 398

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR+LD+ +  G   LA L        + VD S  AL +A+  A  +GV++RF+T  SD F
Sbjct: 224 VRVLDVFSHVGGFSLAALANGAK-SALAVDGSTAALALAQEGAEASGVADRFETRCSDAF 282

Query: 159 SSVEGL------FDVIVSNPP 173
            ++  L      F+V++ +PP
Sbjct: 283 DALTALAAEGQEFEVVICDPP 303


>gi|121534357|ref|ZP_01666181.1| methyltransferase small [Thermosinus carboxydivorans Nor1]
 gi|121307127|gb|EAX48045.1| methyltransferase small [Thermosinus carboxydivorans Nor1]
          Length = 252

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 5/77 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FS 159
           +DLGTGTG + L L+      + VGV+I   A E A+ +   NG++++   + +D     
Sbjct: 51  VDLGTGTGVIGLLLVARG-AGRVVGVEIDAVAAERAQRSVQLNGLTKQMAVVAADLRRLK 109

Query: 160 SV--EGLFDVIVSNPPY 174
            V   G +D++V+NPPY
Sbjct: 110 GVLPAGAWDLVVANPPY 126


>gi|297204301|ref|ZP_06921698.1| methyltransferase [Streptomyces sviceus ATCC 29083]
 gi|297148631|gb|EDY59878.2| methyltransferase [Streptomyces sviceus ATCC 29083]
          Length = 224

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL  +     LP     DV     L  GTG   LAL       +   VD+S 
Sbjct: 17  YGPQEDTALLAGALSEEPLP--PGADV-----LDVGTGTGALALQAARRGSRVTAVDVSW 69

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +A+  A++NA   G S R    + + F  V G  FD+I+SNPPY+ +
Sbjct: 70  RAVCTARANAWLTGASVRVR--RGNLFHPVRGQSFDLILSNPPYVPA 114


>gi|293556577|ref|ZP_06675145.1| 16S RNA methylase [Enterococcus faecium E1039]
 gi|293571203|ref|ZP_06682238.1| methyltransferase small domain superfamily [Enterococcus faecium
           E980]
 gi|291601253|gb|EFF31537.1| 16S RNA methylase [Enterococcus faecium E1039]
 gi|291608714|gb|EFF38001.1| methyltransferase small domain superfamily [Enterococcus faecium
           E980]
          Length = 210

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 55  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E+ D  QS+ +  + E  +  IVSNPP
Sbjct: 109 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 144


>gi|77359508|ref|YP_339083.1| ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123589605|sp|Q3ILJ2|RSMC_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|76874419|emb|CAI85640.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 341

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+++A     P I++  V   LD G G G +   L  ++P    V  D+S  A+   
Sbjct: 192 TKILLENA-----PLIKQGTV---LDFGCGAGLIATYLGLQNPALSFVCSDVSALAIYAT 243

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 N +  + + L SD  +++ G FD+I+SNPP+   +  D
Sbjct: 244 TQTLKLNNI--KGEALLSDGLTNITGKFDLIISNPPFHTGIATD 285


>gi|30410819|ref|NP_660662.2| hypothetical protein BUsg319 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091200|sp|Q8K9L5|RSMC_BUCAP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 336

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G+G + +++L++SP      +D    ALE +K+    N    + + L S+ +S
Sbjct: 198 KILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATLDANFF--KGEVLSSNIYS 255

Query: 160 SVEGLFDVIVSNPP 173
           ++   F++IVSNPP
Sbjct: 256 NIFKKFNMIVSNPP 269


>gi|6165642|gb|AAF04626.1| DNA methyltransferase [Geobacillus stearothermophilus]
          Length = 579

 Score = 44.3 bits (103), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 27/175 (15%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSER 149
           EK  V+R+LD   G G + LA+ K +       + +GVD    A+ IA      +G  + 
Sbjct: 40  EKNRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDFDIDAINIANERLSRSG-HKN 98

Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195
           F  +  D+   V EG    LF        D+I++NPPY+ + I   LG E  +    + +
Sbjct: 99  FRLINKDFLEMVSEGDNYDLFNIEELEPVDIIIANPPYVRTQI---LGAEKAQKLREKFN 155

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           L G +D    Y+     +++ L  +G+  V I  N+ +   +  ES + FLV+ F
Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIIGV-ITSNRYL-TTKGGESTRKFLVSNF 205


>gi|320450558|ref|YP_004202654.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01]
 gi|320150727|gb|ADW22105.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 12/97 (12%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L  SALA  L     R   R+LDLGTG+G + +A  K     K +GVDI    L  
Sbjct: 105 ETTRLALSALARHL-----RPGERVLDLGTGSGILAIAAAKLG--GKALGVDIDETVLPQ 157

Query: 137 AKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171
           A+ NA  NGV  RF   +L+    +   G F+++V+N
Sbjct: 158 AEENARRNGVGVRFLPGSLEE---ALPYGPFNLMVAN 191


>gi|255024743|ref|ZP_05296729.1| hypothetical protein LmonocyFSL_17011 [Listeria monocytogenes FSL
           J1-208]
          Length = 196

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 57  KILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 116

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 117 VTANDYQAIISNPP 130


>gi|327398976|ref|YP_004339845.1| type 11 methyltransferase [Hippea maritima DSM 10411]
 gi|327181605|gb|AEA33786.1| Methyltransferase type 11 [Hippea maritima DSM 10411]
          Length = 199

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G+G + +A LK     + VG DI   A+     N   NGVS+      +D  S
Sbjct: 64  RILDVGIGSGILSIAALKLGAK-EAVGFDIEESAIRECIENGKLNGVSDGLVCFVADSPS 122

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           S+ G FDV+ +N       I D + L + D   R++ DGG
Sbjct: 123 SISGSFDVVFAN-------IFDDIILAMCDEINRLTKDGG 155


>gi|33594830|ref|NP_882473.1| putative methyltransferase [Bordetella parapertussis 12822]
 gi|33599101|ref|NP_886661.1| putative methyltransferase [Bordetella bronchiseptica RB50]
 gi|33564906|emb|CAE39851.1| Putative methyltransferase [Bordetella parapertussis]
 gi|33575147|emb|CAE30610.1| Putative methyltransferase [Bordetella bronchiseptica RB50]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 12/113 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG+G G + +A +++      +GVDI  + +  A++NA   G+++R   +Q D    
Sbjct: 68  VIDLGSGDGRIAIAAVRDRGARSAMGVDIDPERIAEARANARKAGLADRVTFVQQD---- 123

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIAD 211
              LFD  +S    +   ++  + L++R   PRI  SL  G   +SH  T+ +
Sbjct: 124 ---LFDTDISKATVLTMYLLPDVNLKLR---PRILNSLAPGTRVVSHAFTMGE 170


>gi|297526045|ref|YP_003668069.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
 gi|297254961|gb|ADI31170.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
          Length = 175

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFS 159
           +DLG GTG V L LL ++   K V +DI+  AL     N   N    R    ++ SD  S
Sbjct: 14  IDLGCGTGVVGLYLLSKNICSKTVFIDINPVALLNTVYNLKLNYYQHRGLVASISSD--S 71

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +E  FD++V+NPPY+  +
Sbjct: 72  ILENYFDLVVANPPYLPGI 90


>gi|253582135|ref|ZP_04859359.1| methyltransferase [Fusobacterium varium ATCC 27725]
 gi|251836484|gb|EES65021.1| methyltransferase [Fusobacterium varium ATCC 27725]
          Length = 244

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 15/134 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I K +   I+DLGTG GA+ L L K++   K  G++I   +  +A+ N 
Sbjct: 30  LDSLLISEFASITK-NTNNIVDLGTGNGAIPLFLSKKTK-AKITGIEIQEISSNLARRNV 87

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYI-----ESVIVDCLGLEVRDF 190
             N +  +   +  D      +F++     D++VSNPP+      E ++ D   L +   
Sbjct: 88  KLNNLENQITIINDDMKNWRKYFTT--HTLDMVVSNPPFFKFNGNEELLNDLTQLTLARH 145

Query: 191 DPRISLDGGIDGLS 204
           +  I+LD  I+  S
Sbjct: 146 EISITLDTLIETAS 159


>gi|222100464|ref|YP_002535032.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
           4359]
 gi|254783321|sp|B9K9N3|PRMA_THENN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221572854|gb|ACM23666.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
           4359]
          Length = 264

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++D+G GTG + +   K    +  + VD+  +A+E+AK N   N V       +SD  S
Sbjct: 132 RVVDVGCGTGILAIVAKKLGASY-VMAVDVDEQAVEVAKENVQKNSVD--VIVKRSDLLS 188

Query: 160 SVEGLFDVIVSN 171
            V+G+FD++VSN
Sbjct: 189 EVDGVFDLVVSN 200


>gi|255038863|ref|YP_003089484.1| methyltransferase small [Dyadobacter fermentans DSM 18053]
 gi|262828188|sp|C6VS84|TRMN6_DYAFD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|254951619|gb|ACT96319.1| methyltransferase small [Dyadobacter fermentans DSM 18053]
          Length = 240

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RILD+G GTG + L + + + +     V+I  +A   A  N   +   +R     S 
Sbjct: 38  DADRILDIGAGTGLLSLMVAQRNTYAMIDAVEIDAEAFYQAGENVEQSPFHDRITLFHSA 97

Query: 157 WFSSV-EGLFDVIVSNPPYIES 177
               V E  +DVI++NPP+ +S
Sbjct: 98  VQEFVSEHRYDVIITNPPFFQS 119


>gi|254831922|ref|ZP_05236577.1| hypothetical protein Lmon1_11235 [Listeria monocytogenes 10403S]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|329940125|ref|ZP_08289407.1| methyltransferase type 12 [Streptomyces griseoaurantiacus M045]
 gi|329300951|gb|EGG44847.1| methyltransferase type 12 [Streptomyces griseoaurantiacus M045]
          Length = 509

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           + +    R+LDLG G G +   LL++  F + VGVD+S +AL IA      N + ER
Sbjct: 294 LRRHGAARVLDLGCGEGQLVQTLLRDPAFTEIVGVDVSVRALTIASRRLKLNTMGER 350


>gi|227485311|ref|ZP_03915627.1| site-specific DNA-methyltransferase (adenine-specific)
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227236771|gb|EEI86786.1| site-specific DNA-methyltransferase (adenine-specific)
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 373

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 18/127 (14%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCL 183
           +G DIS +A+ +AK NA+  GV E    +  D+ S ++   + V +SNPPY         
Sbjct: 254 LGSDISGRAISLAKQNAINAGVEEDISFITRDFGSVAISNDYGVFISNPPY--------- 304

Query: 184 GLEVRDFD-----PRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN--QKVDV 235
           GL + D D      +I+    G+D  S Y   AD       K  L      YN  QKVD 
Sbjct: 305 GLRLSDTDLSEIYKKINHKLAGLDTWSLYFITADDKFDRQFKRVLSKKRKLYNGGQKVDF 364

Query: 236 VRIFESR 242
            + F  R
Sbjct: 365 YQYFGKR 371


>gi|326315445|ref|YP_004233117.1| adenine-specific DNA-methyltransferase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372281|gb|ADX44550.1| Site-specific DNA-methyltransferase (adenine-specific) [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 522

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R +++ +VR++D G G+G   LA L+  P  + V  ++      I ++N V  G ++R +
Sbjct: 85  RRQRKSIVRLVDPGAGSGRFTLAALRMYPKAEAVAAEMDPTVALILRANLVAMGFADRTE 144

Query: 152 TLQSDW----FSSVEGLFDVIVSNPPYIESVIVDC 182
               D+      +V+G   + + NPPY+    +D 
Sbjct: 145 VRVGDFRDLKLPAVKGT-TLFIGNPPYVRHHDIDA 178


>gi|111220018|ref|YP_710812.1| putative adenine-specific methylase [Frankia alni ACN14a]
 gi|111147550|emb|CAJ59203.1| Putative adenine-specific methylase (partial) [Frankia alni ACN14a]
          Length = 140

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +  A+ N    G+    D L +    ++ G  D++V N PY+ +  +  +  E R+ +PR
Sbjct: 1   MRCARRNVAGGGLVHEGD-LFAALPRTLRGRVDLLVVNAPYVPTDAIGLMPPEAREHEPR 59

Query: 194 ISLDGGIDGLSHYRTI 209
           ++LDGG DGL   R +
Sbjct: 60  LALDGGTDGLDVLRRV 75


>gi|296166757|ref|ZP_06849181.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897927|gb|EFG77509.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 229

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 15/122 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    ++ +++ + P+ ++ LLV+     SL  I  R   R+LDL TG+G V +A  +  
Sbjct: 5   YPGPAVSAAANVYRPQDDSCLLVEVMRESSL--IPGR---RVLDLCTGSGFVAIAAAE-- 57

Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175
               G  V   DI   A+  ++ NA   GV    D  +  W  +++   FDV+VSNPPY+
Sbjct: 58  --LGGADVTAFDICPHAVGCSRGNAAAAGVD--VDVRRGTWSDALDCAPFDVVVSNPPYV 113

Query: 176 ES 177
            +
Sbjct: 114 PT 115


>gi|119384761|ref|YP_915817.1| methyltransferase small [Paracoccus denitrificans PD1222]
 gi|119374528|gb|ABL70121.1| methyltransferase small [Paracoccus denitrificans PD1222]
          Length = 252

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G+++     E+A+ NA TN ++      Q D    
Sbjct: 44  VLELGCGAGVAMLCLGARVPGLRLAGLELQPSYAELARQNAATNAIAAELH--QGDLARM 101

Query: 161 VEGL----FDVIVSNPPY 174
              L    FD +++NPPY
Sbjct: 102 PAALREQSFDHVIANPPY 119


>gi|56695236|ref|YP_165584.1| hypothetical protein SPO0321 [Ruegeria pomeroyi DSS-3]
 gi|56676973|gb|AAV93639.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 257

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+PR      VD    F    +  +    +L+LG G GA  L+L    P     GV++  
Sbjct: 22  FQPRDGYRAGVDPV--FLAASVAAQTGQSVLELGCGAGAAILSLGARVPDLALTGVELQP 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
              ++A+ NA  N ++   D ++ D  +  + L    FD +++NPPY
Sbjct: 80  GYADLARRNAAANDIA--LDVVEGDIAALPQALRQQSFDHVIANPPY 124


>gi|257893152|ref|ZP_05672805.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,408]
 gi|257829531|gb|EEV56138.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,408]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 46  SRVLIDAFDWKELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E+ D  QS+ +  + E  +  IVSNPP
Sbjct: 100 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 135


>gi|332535482|ref|ZP_08411263.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035092|gb|EGI71607.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 341

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+++A     P I++    ++LD G G G +   L   +P  + V  D+S  A    
Sbjct: 192 TKVLLENA-----PTIKQG---KVLDFGCGAGLIATFLGLHNPALEFVCSDVSALATYAT 243

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +     N ++   + + SD   S+ G FD+I+SNPP+   +  D
Sbjct: 244 QQTLKLNNING--EAILSDGLKSINGKFDLIISNPPFHTGIATD 285


>gi|120405642|ref|YP_955471.1| type 11 methyltransferase [Mycobacterium vanbaalenii PYR-1]
 gi|119958460|gb|ABM15465.1| Methyltransferase type 11 [Mycobacterium vanbaalenii PYR-1]
          Length = 280

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKA 133
           +P  +L+VDS  A + PR +      ILDLG GTGA  LAL +      G  G+DIS   
Sbjct: 33  KPFEDLIVDSVAAAAGPREQ------ILDLGCGTGATTLALAERLGAHGGCTGIDISEPM 86

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +  A++ A    +   F    +  F      FDV+VS
Sbjct: 87  IHAARTRARDRNLPVEFVVGDAQSFPFQPNTFDVMVS 123


>gi|321314402|ref|YP_004206689.1| putative RNA methyltransferase [Bacillus subtilis BSn5]
 gi|320020676|gb|ADV95662.1| putative RNA methyltransferase [Bacillus subtilis BSn5]
          Length = 461

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 29/166 (17%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPR 75
           + D   +F    +IV+++     + I G      W + Y      +V+  +S+ +F +  
Sbjct: 233 IEDITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIYDLIGDVKFAISARSFYQVN 292

Query: 76  PE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE T++L D AL ++    E +    ++D   G G + L L K++   K  GV+I  +A+
Sbjct: 293 PEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAI 346

Query: 135 EIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           E AK NA  NG++         +T+   W+   EG+  D +V +PP
Sbjct: 347 EDAKRNAELNGITNAEFAVGEAETVIPKWYE--EGIAADTLVVDPP 390


>gi|309972420|gb|ADO95621.1| Putative methyltransferase [Haemophilus influenzae R2846]
          Length = 240

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R   +Q+D   
Sbjct: 47  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLIQTDIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130


>gi|126463164|ref|YP_001044278.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029]
 gi|126104828|gb|ABN77506.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029]
          Length = 253

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G+++      +A+ NA  NGV+   + ++ D  + 
Sbjct: 47  VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAALNGVA--LEVVEGDLSAM 104

Query: 161 VEGL---FDVIVSNPPYIES 177
              L   FD +++NPPY  +
Sbjct: 105 PAALRQSFDHVIANPPYYPA 124


>gi|297625830|ref|YP_003687593.1| methyltransferase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921595|emb|CBL56149.1| methyltransferase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 209

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LDLG G G + +AL  E P  +   +D++ +A+E+   NA   GV+ +      D  
Sbjct: 69  ARFLDLGCGFGPIAVALATECPRARVDAIDVNERAVELTAMNAKALGVASQVSASAPDQV 128

Query: 159 SSVEGLFDVIVSNPP 173
            + +  +D I SNPP
Sbjct: 129 PA-DVRYDEIWSNPP 142


>gi|257888043|ref|ZP_05667696.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,141,733]
 gi|257896338|ref|ZP_05675991.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12]
 gi|257899313|ref|ZP_05678966.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15]
 gi|257824097|gb|EEV51029.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,141,733]
 gi|257832903|gb|EEV59324.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12]
 gi|257837225|gb|EEV62299.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 8/97 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D+     LP     D  +ILD+G G G + LAL   +  F  + VDI+ +A+ +A
Sbjct: 46  SRVLIDAFDWEELP-----DEGKILDVGCGYGPIGLALAFATQRFVEM-VDINERAVSLA 99

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           + NA  N + E+ D  QS+ +  + E  +  IVSNPP
Sbjct: 100 QGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPP 135


>gi|217965657|ref|YP_002351335.1| methyltransferase small domain superfamily [Listeria monocytogenes
           HCC23]
 gi|217334927|gb|ACK40721.1| methyltransferase small domain superfamily [Listeria monocytogenes
           HCC23]
 gi|307569795|emb|CAR82974.1| ribosomal RNA small subunit methyltransferase C [Listeria
           monocytogenes L99]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|85814038|emb|CAF31454.1| putative gentamicin methyltransferase [Micromonospora echinospora]
          Length = 321

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L R  G    Q ++D    +DD   F         L+   +H ++   D           
Sbjct: 51  LTREVGADGRQALLDSGMAVDDGTTF------SSPLRGHQLHGVVVLSDPDVEEEVQHRW 104

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +P  E +LL+   L        +R   R LD+G G+G + L L     +   +GVD++
Sbjct: 105 YVDPLWEADLLIRLML--------RRGGARALDMGCGSGVLSLVLADR--YESVLGVDVN 154

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +A+ +++ NA  NG++      + D F   EG F  IV N P  E 
Sbjct: 155 PRAVALSRLNAALNGLTN-VTFREGDMFEPAEGRFSRIVFNSPTNEE 200


>gi|257866503|ref|ZP_05646156.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257872981|ref|ZP_05652634.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257876107|ref|ZP_05655760.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC20]
 gi|257800461|gb|EEV29489.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257807145|gb|EEV35967.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257810273|gb|EEV39093.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC20]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 25/158 (15%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +S+H    +PD+  D  Q  F        L+ ++ H       F       S DT +   
Sbjct: 1   MSNHYYTENPDTAHDFEQWSF-------ELRGKNFH-------FVTDSGVFSRDTVDYG- 45

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            + +L+D+     LP         +LD+G G G V LAL   S     + +DI+ +A+++
Sbjct: 46  -SRVLIDAFEWGELPE------GSLLDVGCGYGPVGLALAYASQRPVEM-IDINQRAVDL 97

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
           AK NA  NG+ E+ D  QS+ ++ + +  +  I+SNPP
Sbjct: 98  AKGNAQRNGI-EQVDIHQSNIYAQLNQPAYAAILSNPP 134


>gi|225682438|gb|EEH20722.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 428

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 21/114 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132
           PE  +   ++  F L     +    ILDLGTG G++ LALL++   F+    VGVD S K
Sbjct: 196 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGSM-LALLRDEGGFEASRMVGVDYSPK 254

Query: 133 ALEIAK-------SNAVTNGVSE-RFD--------TLQS-DWFSSVEGLFDVIV 169
           ++E+A+       + A ++ +S  RF+         +Q+ DWF + EG FD+++
Sbjct: 255 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRPVQTLDWFPAAEGGFDIVL 308


>gi|153008078|ref|YP_001369293.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188]
 gi|151559966|gb|ABS13464.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188]
          Length = 340

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +  ++D   A  +P +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGVIDKGSALLVPHMEKIFFGNVADLGAGWGYLAAQCLKFADRIKSIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D 
Sbjct: 232 EALEAARGNLERLGASV---PISFNWFDVTSEKMAGIYDTVIMNPPFHEGRVTDV 283


>gi|294637766|ref|ZP_06716040.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC
           23685]
 gi|291089058|gb|EFE21619.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC
           23685]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P PE   +++D  LAF           L  ++  D+V   ++D G G+G + +A LK   
Sbjct: 122 PDPEAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLVGKTVIDFGCGSGILAIAALKLG- 180

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +A++ ++ NA  NGVSER +  L  D  +++    DV+V+N
Sbjct: 181 AARAIGIDIDPQAIQASRDNAERNGVSERLELYLPQDQPANLSA--DVVVAN 230


>gi|291296035|ref|YP_003507433.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           ruber DSM 1279]
 gi|290470994|gb|ADD28413.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           ruber DSM 1279]
          Length = 254

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 38/165 (23%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151
           +++  RILDL TGTG + L L K +P  + +G D +   LE+A+  A+  G+   F   D
Sbjct: 48  EKNPSRILDLATGTGDIALLLKKVAPEAEVIGGDFAPPMLELARQKALKAGLEVPFVEAD 107

Query: 152 TLQ--------------------SDWFSSVEGLFDVIVSN--------PPYIESVIVDCL 183
            L+                    +D+  ++  L+ VI           PP   S     L
Sbjct: 108 ALRLPFPDQHFDAVVIAFGFRNFADYHKALVELYRVIAPGGRLCILEFPPPPRS----GL 163

Query: 184 GLEVRDFDPRI-SLDGGI--DGLSHYRTIADGVSRHLNKDGLCSV 225
           G+  R +  RI  + GG+     + YR + D V R  N D L ++
Sbjct: 164 GVLYRFYFTRILPIIGGLVSGSAAAYRYLPDSVERFPNPDTLANM 208


>gi|217076184|ref|YP_002333900.1| ribosomal RNA small subunit methyltransferase C [Thermosipho
           africanus TCF52B]
 gi|217036037|gb|ACJ74559.1| ribosomal RNA small subunit methyltransferase C [Thermosipho
           africanus TCF52B]
          Length = 198

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158
           +LD+G G G + + L KE+P       DI+ +A+E AK N+  N +    R   L   W 
Sbjct: 61  VLDIGCGYGVIGITLKKENPDINLYMSDINQRAVEFAKINSKDNNIEADIRQGYLYEPWN 120

Query: 159 SSVEGLFDVIVSNPPYI 175
           +     FD I+SNPP +
Sbjct: 121 NMS---FDHIISNPPIV 134


>gi|325567403|ref|ZP_08144070.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158836|gb|EGC70982.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 3/74 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G V LAL   S     + +DI+ +A+++AK NA  NG+ E+ D  QS+ ++ 
Sbjct: 63  LLDVGCGYGPVGLALAYASQRPVEM-IDINQRAVDLAKGNAQRNGI-EQVDIHQSNIYAQ 120

Query: 161 V-EGLFDVIVSNPP 173
           + +  +  I+SNPP
Sbjct: 121 LNQPAYAAILSNPP 134


>gi|288927581|ref|ZP_06421428.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330415|gb|EFC68999.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 236

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157
           RILD+GTGTG + L L +  P  +  GV++  +A   A+ N   +  +++   +      
Sbjct: 37  RILDIGTGTGLIALMLAQRYPDAEITGVELDEQAALQAQENVAGSPFAQQVTINNTPIQH 96

Query: 158 FSS---VEGLFDVIVSNPPYIESV 178
           FS    + G F  IVSNPP+  S+
Sbjct: 97  FSHQPDLHGRFTSIVSNPPFYHSL 120


>gi|283456414|ref|YP_003360978.1| 16S RNA methylase [Bifidobacterium dentium Bd1]
 gi|283103048|gb|ADB10154.1| 16S RNA methylase [Bifidobacterium dentium Bd1]
          Length = 207

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+      + +D     
Sbjct: 69  LDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIG-TIHAVTADEIPH- 126

Query: 162 EGLFDVIVSNPP 173
           +  FD+I SNPP
Sbjct: 127 DLTFDLIWSNPP 138


>gi|296420792|ref|XP_002839952.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636160|emb|CAZ84143.1| unnamed protein product [Tuber melanosporum]
          Length = 228

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 72  FEPRPETELLVDSALAFSLP----RIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--- 124
           +EP  +T LL+D+ LA   P    R  +  +   L+LG+G+G +   L   S    G   
Sbjct: 16  YEPSEDTFLLLDT-LALQSPFLRSRFPQTSLPLALELGSGSGVITSFLTTHSATLFGHTS 74

Query: 125 ---VGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
              +  DIS  A +  K     N   E       +++D  + +  G+ D++V NPPY+ +
Sbjct: 75  ITTLSTDISPHAPDATKQTVSANITEESGCFLGAIRTDLATGLRPGVVDMLVFNPPYVPT 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            +V+    E       ++  GG+DG+     +  G+   L++ G+  + +    K + V
Sbjct: 135 EVVEDGNGEEGWIG--VACGGGVDGMEVTIRVLKGLKECLSESGVAYILLCERNKPEAV 191


>gi|227112915|ref|ZP_03826571.1| hypothetical protein PcarbP_08124 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 248

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             R+LD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R      D
Sbjct: 48  ATRVLDIGSGSGLLALMLAQRSEPHVQIDAVELDSAASDQAKENVAASPWADRITVYAED 107

Query: 157 WFSSVE---GLFDVIVSNPPY 174
             S  E     + +I+SNPPY
Sbjct: 108 IVSFAETRAATYSLIISNPPY 128


>gi|300362314|ref|ZP_07058490.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03]
 gi|300353305|gb|EFJ69177.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03]
          Length = 217

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   VD++ +AL++A+ NA  N ++   +  QS+ +  
Sbjct: 80  ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERALDLARRNAKFNQIN-NVNIYQSNIYEQ 138

Query: 161 VEGLFDVIVSNPP 173
           V+  + ++++NPP
Sbjct: 139 VDKKYGLVITNPP 151


>gi|307152516|ref|YP_003887900.1| type 11 methyltransferase [Cyanothece sp. PCC 7822]
 gi|306982744|gb|ADN14625.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822]
          Length = 223

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQ 154
           ++ ++LD GTGT  + + + ++ P ++ V +D++   L+I + N     ++ER   + + 
Sbjct: 41  NIAKVLDAGTGTARIPILICQQRPGWQVVAIDLAQSMLDIGRKNIEQANLTERIQLELVD 100

Query: 155 SDWFSSVEGLFDVIVSN 171
           S      +  FDV++SN
Sbjct: 101 SKQMPYPDHYFDVVLSN 117


>gi|331701736|ref|YP_004398695.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
 gi|329129079|gb|AEB73632.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
          Length = 203

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTG G + +++ K  P  +   +D++  AL +AK NA  N V +     +S+ + 
Sbjct: 64  KLLDMGTGYGPIGISIAKAFPDRQIDMIDVNEVALALAKKNADANRV-DNVHIFESNIYE 122

Query: 160 SVEGLFDVIVSNPP 173
           ++   +  IV+NPP
Sbjct: 123 AITDQYAAIVTNPP 136


>gi|156936955|ref|YP_001434751.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
 gi|156565939|gb|ABU81344.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
          Length = 194

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 6/78 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + + + K +P  +   VD++  A++ AK NA  NGV  R   LQ + + 
Sbjct: 57  KVLDVGCGYGVLGILMAKLNPNLEVYMVDVNPVAVDAAKRNAELNGV--RVTVLQGNLYE 114

Query: 160 SVEGL----FDVIVSNPP 173
             + L    F  IVSNPP
Sbjct: 115 PTDLLGIKDFSTIVSNPP 132


>gi|21228642|ref|NP_634564.1| hypothetical protein MM_2540 [Methanosarcina mazei Go1]
 gi|20907142|gb|AAM32236.1| Conserved hypothetical protein [Methanosarcina mazei Go1]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 22/179 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           VRL  S   +EP  ++ LL D+AL  + P +      RIL++G G+G V   +       
Sbjct: 11  VRLGASDLVYEPAEDSFLLADAALEEAEPGM------RILEIGAGSGFVSAVIRANVKGI 64

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI----ESV 178
           +    +I+  A   AK+N V    ++ F  L+     S    FD+I+ NPPY+    E  
Sbjct: 65  RIFATEINPHAALCAKANGVEVIRTDLFRGLKP---GSKGTPFDLILFNPPYLPTSEEEK 121

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           +   L           + DGG  G        D V  +L   G   V I     ++ V+
Sbjct: 122 VTGWL---------NYAFDGGASGRETLDRFLDEVRNYLKPGGKVLVLISSITGLEAVK 171


>gi|56961923|ref|YP_173645.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16]
 gi|56908157|dbj|BAD62684.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16]
          Length = 219

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDW 157
           ILD+G G G + LAL K  P  + V +D++ +A ++A+ NA  NGV      FD      
Sbjct: 77  ILDVGCGYGPIGLALAKADPSRRVVMIDVNERACQLAEKNAKANGVKNADIHFDERGLAG 136

Query: 158 FSSVEGLFDVIVSNPP 173
           F      +  +V+NPP
Sbjct: 137 FER-SARYAAVVTNPP 151


>gi|55981823|ref|YP_145120.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           thermophilus HB8]
 gi|55773236|dbj|BAD71677.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           thermophilus HB8]
          Length = 220

 Score = 43.9 bits (102), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TGTG + L L + +P  + VG D +   L IA+  A   G+  RF    +    
Sbjct: 39  RILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEADALALP 98

Query: 160 SVEGLFDVI 168
             +G FD +
Sbjct: 99  FPDGAFDAV 107


>gi|269219564|ref|ZP_06163418.1| putative methyltransferase small domain protein [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269210806|gb|EEZ77146.1| putative methyltransferase small domain protein [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 216

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G + LAL +E+P      VD++ +ALE+ + NA   G S +         +  
Sbjct: 66  IDLGCGWGPLTLALCEEAPGADVWAVDVNERALELTRKNAARAGFSPKALAADEALAALG 125

Query: 162 EGLFDVIVSNPP 173
           E    +I SNPP
Sbjct: 126 ERKIQLIWSNPP 137


>gi|264677180|ref|YP_003277086.1| methyltransferase small [Comamonas testosteroni CNB-2]
 gi|262207692|gb|ACY31790.1| methyltransferase small [Comamonas testosteroni CNB-2]
          Length = 404

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I    + +  D+G GTG +   LLK       V  D S +AL  A  N    G + R + 
Sbjct: 220 IPAAGIQQAWDIGVGTGVLSALLLKRG-VKSVVATDTSERALACACENLQRLGHASRVEL 278

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +D F+  +G   +IV NPP++       L   + D D R+ L G + GL+ +
Sbjct: 279 QHADLFA--QGQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLAAH 329


>gi|17230508|ref|NP_487056.1| hypothetical protein all3016 [Nostoc sp. PCC 7120]
 gi|17132110|dbj|BAB74715.1| all3016 [Nostoc sp. PCC 7120]
          Length = 220

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158
           +LD GTGT  + + + ++ P ++ V +D++   L+IA  +   +G+ E  R + + +   
Sbjct: 46  VLDAGTGTARIPVLICQKRPQWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRL 105

Query: 159 SSVEGLFDVIVSN 171
              +G+FD++VSN
Sbjct: 106 PYEDGIFDLVVSN 118


>gi|15612687|ref|NP_240990.1| hypothetical protein BH0124 [Bacillus halodurans C-125]
 gi|10172736|dbj|BAB03843.1| BH0124 [Bacillus halodurans C-125]
          Length = 201

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+++   F  P IE      +LD+G G G + ++L ++        VD++ +A+++A
Sbjct: 46  SRLLIET---FQFPEIEGD----VLDVGCGYGPIGISLARDGGERSVHMVDVNERAIDLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           K NA  N V       +SD F  V+   F  IV+NPP
Sbjct: 99  KRNATANHVKNVV-VYRSDLFQQVQDRQFAAIVTNPP 134


>gi|315608798|ref|ZP_07883774.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574]
 gi|315249492|gb|EFU29505.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574]
          Length = 235

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTGTG + L + +  P     G+DI   A   A+ NA  +    R +   S     
Sbjct: 38  ILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFGPRIEVAHSSLAGF 97

Query: 161 VEGL-----FDVIVSNPPYI 175
           V        FD IV NPP+ 
Sbjct: 98  VAAASPPLSFDSIVCNPPFF 117


>gi|21623225|gb|AAM67873.1| hypothetical 37.6 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 195

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 45/74 (60%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G+G + +++L++SP      +D    ALE +K+    N    + + L S+ +S
Sbjct: 57  KILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATLDANFF--KGEVLSSNIYS 114

Query: 160 SVEGLFDVIVSNPP 173
           ++   F++IVSNPP
Sbjct: 115 NIFKKFNMIVSNPP 128


>gi|209523574|ref|ZP_03272128.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209495979|gb|EDZ96280.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 220

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158
           +LD GTGT  + + + +  P ++ +G+D+S   L+I +SN     VS + +   + +   
Sbjct: 46  VLDAGTGTARIPILIAQHKPGWQIIGIDLSENMLKIGESNIKAAAVSNQVELALVDAKKL 105

Query: 159 SSVEGLFDVIVSN 171
             ++G FD+++SN
Sbjct: 106 PYIDGQFDLVISN 118


>gi|14591657|ref|NP_143744.1| hypothetical protein PH1915 [Pyrococcus horikoshii OT3]
 gi|3258357|dbj|BAA31040.1| 396aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 396

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ T TG  A+  A+         +G+D S +A+E AK NA  NGV +R   +    
Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IGIDKSPRAIETAKENAKLNGVEDRMKFIVGSA 276

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E L      FD++V +PP
Sbjct: 277 FEEMEKLQKKGEKFDIVVLDPP 298


>gi|148259237|ref|YP_001233364.1| ribosomal L11 methyltransferase [Acidiphilium cryptum JF-5]
 gi|146400918|gb|ABQ29445.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Acidiphilium cryptum JF-5]
          Length = 305

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 80  LLVDSALAF-------------SLPRIEKRDVV-RILDLGTGTG--AVCLALLKESPFFK 123
           +L+D+ LAF             +L R+ KR    RILDLGTG+G  A+  A +   P   
Sbjct: 123 ILLDAGLAFGTGEHGSTRGCLLALERLAKRRAPGRILDLGTGSGILAITAAKIWGKPVLA 182

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
               DI  +A+ +A +NA  NGV+     + SD +S+
Sbjct: 183 ---TDIDQRAVRVASANAALNGVAPLLRVIGSDGWSA 216


>gi|194854970|ref|XP_001968456.1| GG24496 [Drosophila erecta]
 gi|190660323|gb|EDV57515.1| GG24496 [Drosophila erecta]
          Length = 224

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +E+      ++LG+G+G +  AL K+ + F   +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLEYLEQLQPHLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            KA    +  A  NG   R D+++     ++     DV++ NPPY   V+     L+ + 
Sbjct: 77  PKACNATRRTATRNGA--RLDSIRCSLADALRPQSVDVLLFNPPY---VVTSDAELQTQH 131

Query: 190 FD 191
           FD
Sbjct: 132 FD 133


>gi|238751412|ref|ZP_04612905.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC
           43380]
 gi|238710470|gb|EEQ02695.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC
           43380]
          Length = 293

 Score = 43.9 bits (102), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 20/136 (14%)

Query: 87  AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  L  ++  D+V   I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  N
Sbjct: 146 ALCLQWLDGLDLVGKTIIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRN 204

Query: 145 GVSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGI 200
           GVSER +  L  D  + +    DV+V+N           L   +R+  P IS   + GG 
Sbjct: 205 GVSERLELYLSKDQPADLSA--DVVVAN----------ILAGPLRELAPLISVLPVTGGH 252

Query: 201 DGLSH-YRTIADGVSR 215
            GLS    T A GV++
Sbjct: 253 LGLSGVLATQAAGVAQ 268


>gi|325983696|ref|YP_004296098.1| methyltransferase small [Nitrosomonas sp. AL212]
 gi|325533215|gb|ADZ27936.1| methyltransferase small [Nitrosomonas sp. AL212]
          Length = 381

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 26/135 (19%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----GVDISC 131
           P  ELLV  + AF              D+GTGTG +  AL       +GV      D   
Sbjct: 195 PIPELLVTESTAF--------------DIGTGTGVLAAALA-----LRGVRHITATDQDA 235

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +AL  A+ N     +  + + +Q+D F   +G   +IV NPP+I +     L   + D D
Sbjct: 236 RALNCARDNLTRLNMLNQVELVQADLFP--QGQAALIVCNPPWIPARPSSPLEHAIFDPD 293

Query: 192 PRISLDGGIDGLSHY 206
            R+ L G + GL+ +
Sbjct: 294 SRM-LRGFLQGLNAH 307


>gi|299821048|ref|ZP_07052936.1| methyltransferase domain protein [Listeria grayi DSM 20601]
 gi|299816713|gb|EFI83949.1| methyltransferase domain protein [Listeria grayi DSM 20601]
          Length = 200

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G + LAL K  P  +   VD++ +A+E+AK NA  N + +     +S  + 
Sbjct: 61  KVLDVGCGYGPIGLALAKAYPAMRIDMVDVNERAIELAKENATLNHI-DNAAIFESSVYE 119

Query: 160 SVE-GLFDVIVSNPP 173
           +V    +  I+SNPP
Sbjct: 120 NVTVDDYRYILSNPP 134


>gi|239939498|ref|ZP_04691435.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239985987|ref|ZP_04706651.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
          Length = 255

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 13/149 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+T+ L+   LA ++ R        +LDL TG+GA+ L   +     +   VDIS +A+
Sbjct: 50  RPQTDTLL---LALAMRREGIGPGTDLLDLCTGSGALALHAARLG--ARVTAVDISRRAV 104

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ N     +       + D   ++ G  FD +VSNPPY+ +      GL +    P 
Sbjct: 105 ASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAP-----GLALPRHGPG 157

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            S D G DG      I D     L   GL
Sbjct: 158 RSWDAGPDGRVILDRICDDAFAALRPGGL 186


>gi|297202991|ref|ZP_06920388.1| methyltransferase type 12 [Streptomyces sviceus ATCC 29083]
 gi|197711984|gb|EDY56018.1| methyltransferase type 12 [Streptomyces sviceus ATCC 29083]
          Length = 492

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 31/52 (59%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             R+LDLG G G +  ALLK+  F + VGVD+S +AL IA      + + ER
Sbjct: 299 AARVLDLGCGQGQLVQALLKDPKFTEIVGVDVSVRALTIASRRLKLDRMGER 350


>gi|186685653|ref|YP_001868849.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102]
 gi|186468105|gb|ACC83906.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102]
          Length = 238

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           +RIL+LG GTG + L +LK  P  + + +D S + L+ A+     +G  +R+   Q+   
Sbjct: 43  LRILELGCGTGELSLKILKRFPNAQVIALDYSPRMLQFAQHKITASGYQKRWVGTQADFG 102

Query: 156 DWFSSVEGL-----FDVIVSN 171
           DW ++ E L     FD  VS+
Sbjct: 103 DWANNPEKLDIGSEFDACVSS 123


>gi|307328253|ref|ZP_07607431.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
 gi|306886087|gb|EFN17095.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
          Length = 527

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R+LDLGTG+G   L   + +   +    D + +AL IA+     +G  E  D  +   
Sbjct: 177 VGRVLDLGTGSGIQALHAGRHA--TRVTATDRNPRALAIARLTLALSGAPEP-DLREGSL 233

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V +  +D+IVSNPP++ S      G E+      +  +GG+ G    RT+    + H
Sbjct: 234 FEPVRDETYDLIVSNPPFVISP-RSPEGSEL------VYREGGMSGDDLCRTLVQQSAGH 286

Query: 217 LNKDGLCSVEIGYNQ 231
           L   G C +   +  
Sbjct: 287 LADGGWCQLLANWQH 301


>gi|302904823|ref|XP_003049144.1| hypothetical protein NECHADRAFT_62422 [Nectria haematococca mpVI
           77-13-4]
 gi|256730079|gb|EEU43431.1| hypothetical protein NECHADRAFT_62422 [Nectria haematococca mpVI
           77-13-4]
          Length = 329

 Score = 43.9 bits (102), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 45/112 (40%), Gaps = 13/112 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D  N RL L    F       L +D  L F+ P      V R+LDLGTGTG   +    E
Sbjct: 56  DAENERLDLQHHIFY------LTLDGKLGFAPPNKPDAKVGRVLDLGTGTGIWAMDFGDE 109

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            P  + +G+D+S    +    N     V    D    +W  S    FD I S
Sbjct: 110 HPEAEVIGIDLSPSQPQFVPPN-----VRFEIDDWDEEWTYSQP--FDYIHS 154


>gi|224038935|gb|ACN38364.1| putative sisomicin methyltransferase [Micromonospora inyonensis]
          Length = 320

 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 5/91 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R   R LD+G G+G + L L     +   +GVD++ +A+ +++ NA  NG++      +
Sbjct: 121 RRGGARALDMGCGSGVLSLVLADR--YESVLGVDVNPRAVALSRLNAALNGLTN-VTFRE 177

Query: 155 SDWFSSVEGLFDVIVSNPPYIE--SVIVDCL 183
            D F   EG F  IV N P  E  S  VD L
Sbjct: 178 GDMFEPAEGRFSRIVFNSPTNEEGSEFVDLL 208


>gi|229823576|ref|ZP_04449645.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271]
 gi|229787020|gb|EEP23134.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L     ++ +R   RILDL +GTG +   LL          +++    +++A+ + 
Sbjct: 35  VDAILLAHFAKVPRRQTARILDLCSGTGVIPF-LLSAKTAGHIDAIELQEALVDMAQRSC 93

Query: 142 VTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPY 174
             N +++R    Q D     +   L+DV+  NPPY
Sbjct: 94  QLNNLTDRLTFRQGDVKTMEAARPLYDVVTCNPPY 128


>gi|312139988|ref|YP_004007324.1| methyltransferase [Rhodococcus equi 103S]
 gi|325674537|ref|ZP_08154225.1| methyltransferase [Rhodococcus equi ATCC 33707]
 gi|311889327|emb|CBH48643.1| putative methyltransferase [Rhodococcus equi 103S]
 gi|325554797|gb|EGD24471.1| methyltransferase [Rhodococcus equi ATCC 33707]
          Length = 242

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 22/156 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDI 129
           + P+ +T LL  + L   +         R+LD+G GTG  +V  AL           VD+
Sbjct: 31  YPPQSDTYLLARTLLGEPI-----EPGTRVLDIGAGTGYLSVSAALAGSRNV---TAVDV 82

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV--IVDCLGLE 186
           + +AL   + NA  NGV  R   +  D  + + E  FD++VSNPPY+ +    +   GL 
Sbjct: 83  AKRALLNTRLNATLNGVQIR--AVHGDLTNPLGENNFDLVVSNPPYVPAADDTLPTGGLA 140

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                     D G DG +H   I     R L   G+
Sbjct: 141 R-------CWDAGRDGRAHLDRICREAPRILAPGGV 169


>gi|296104250|ref|YP_003614396.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058709|gb|ADF63447.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +     +  V++  +A   A  NA+ +  + R     +D
Sbjct: 45  VKRILDIGTGSGLLALMLAQRTDEHVTIDAVELDAQAAGQASENALESPWATRIKVECAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W       +D+IVSNPPY
Sbjct: 105 VLAWAPEQTARYDLIVSNPPY 125


>gi|291166621|gb|EFE28667.1| SAM-dependent methyltransferase [Filifactor alocis ATCC 35896]
          Length = 253

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTGTG + + +L +S   K    +I  +  ++A+ + + NG+ +R   + SD   +  
Sbjct: 54  DLGTGTGIIPILILGKSNLKKIYAFEIQEEVADMAQRSVLLNGLEDRATVICSDLKLANR 113

Query: 163 GL----FDVIVSNPPYIES 177
            +     D +VSNPPY+++
Sbjct: 114 HIEKCSLDFVVSNPPYMKT 132


>gi|262831172|sp|B2VI36|TRMN6_ERWT9 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R+LD+G+G+G + L L + +     +  V++  +A   A+ N   +  + R    Q+D
Sbjct: 45  VKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRVHVQQAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W    E  + +IVSNPPY
Sbjct: 105 VVEWAQRCEHSYSLIVSNPPY 125


>gi|157372654|ref|YP_001480643.1| 50S ribosomal protein L11 methyltransferase [Serratia
           proteamaculans 568]
 gi|166989900|sp|A8GK75|PRMA_SERP5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157324418|gb|ABV43515.1| ribosomal protein L11 methyltransferase [Serratia proteamaculans
           568]
          Length = 293

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKD--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L DV+V+N
Sbjct: 219 PADLLADVVVAN 230


>gi|302883294|ref|XP_003040548.1| hypothetical protein NECHADRAFT_98109 [Nectria haematococca mpVI
           77-13-4]
 gi|256721434|gb|EEU34835.1| hypothetical protein NECHADRAFT_98109 [Nectria haematococca mpVI
           77-13-4]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N RL L  + F       L  DS L+ S P + +    R+LDLGTGTG   +    E P 
Sbjct: 60  NNRLDLQHNLFL------LTFDSKLSLSPPNLPEFKTGRVLDLGTGTGIWAIDFADEHPE 113

Query: 122 FKGVGVDISCKALEIAKSN 140
            + +GVD+S    E    N
Sbjct: 114 TEVIGVDLSPIQPEFVPPN 132


>gi|282852742|ref|ZP_06262084.1| methyltransferase small domain protein [Lactobacillus gasseri
           224-1]
 gi|282556484|gb|EFB62104.1| methyltransferase small domain protein [Lactobacillus gasseri
           224-1]
          Length = 171

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   VD++ +A+++AK NA  N + +  +  +S+ +  
Sbjct: 60  ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 118

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 119 VDNKYGLIITNPP 131


>gi|237740004|ref|ZP_04570485.1| methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422021|gb|EEO37068.1| methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 243

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151
           ++  +ILD+GTG   + L L K +   K  GV+I   + ++A  N   N ++E+    +D
Sbjct: 42  KNTKKILDIGTGNAVIPLFLSKRTSA-KIYGVEIQEISYQLALRNISINNLNEQIYIIYD 100

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
            +++       G FD+++SNPP+
Sbjct: 101 NIKNYLKYFTVGSFDIVLSNPPF 123


>gi|219682246|ref|YP_002468630.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219621979|gb|ACL30135.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS          KR   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSKRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +N  + +   + S+ +S+V   FD+I+SNPP+
Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214


>gi|229824583|ref|ZP_04450652.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271]
 gi|229785954|gb|EEP22068.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271]
          Length = 203

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDW 157
           +I++LG+G G V +AL K  P  +  GV+I+ +A ++A++N+  N V      L     W
Sbjct: 63  QIVELGSGYGPVTIALAKLYPQAQVTGVEINERAYQLAQANSQLNRVENTAYQLADAGQW 122

Query: 158 FSSVEGLFDVIVSNPP 173
            +S     D +V+NPP
Sbjct: 123 QASQAP--DFVVTNPP 136


>gi|224418991|ref|ZP_03656997.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|253827938|ref|ZP_04870823.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|313142503|ref|ZP_07804696.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|253511344|gb|EES90003.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|313131534|gb|EFR49151.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
          Length = 278

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 13/204 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           I R    E I  I+    FY     +      PRPETE+LVD A       I + +   I
Sbjct: 61  IQRRKNLEPIEYIINKVSFYGKEFYVDRGVLIPRPETEILVDKARNI----ITQNNCKNI 116

Query: 102 LD--LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
            +  +G+G  ++ LALL  +        DI  +AL     N     +S  + + +   D+
Sbjct: 117 AEIGIGSGIISIMLALLLPNSNLNFYASDIIPEALFNTHVNLEKFKISNVKLYKSAFLDF 176

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  FD+++SNPPYI+   +    L    F+P+ +L GG  G      I      + 
Sbjct: 177 NKKENITFDLLISNPPYIKKGEILPTPL---SFEPQKALFGGERGDEILHQIIKLAYENK 233

Query: 218 NKDGLCSVEIGYNQKVDVVRIFES 241
               +C  E+GYNQ+  +  + ++
Sbjct: 234 IPHLIC--EMGYNQRESIENLMQN 255


>gi|119470498|ref|ZP_01613201.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7]
 gi|119446199|gb|EAW27476.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7]
          Length = 233

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           +LD+GTGTG + L   +  P      V+I   A   A  N   +    ++ +  T+QS  
Sbjct: 39  LLDIGTGTGLLALMCKQRRPALSITAVEIDENAYNQALQNVANSPWPNIAIKHQTIQS-- 96

Query: 158 FSSVEGLFDVIVSNPPY 174
           F+S +  FDVI+SNPPY
Sbjct: 97  FNS-DAPFDVIISNPPY 112


>gi|297160364|gb|ADI10076.1| methyltransferase small [Streptomyces bingchenggensis BCW-1]
          Length = 350

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 18/130 (13%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  L  DS+LA+              D+GTGTG V  A+L      + V  D   +AL  
Sbjct: 165 EAPLPGDSSLAY--------------DIGTGTG-VLAAVLARRGVGRVVATDQDPRALAC 209

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ N    G++ R D ++ D F    G   ++V NPP++ +     +   V D   R+ L
Sbjct: 210 ARENIARLGLAGRVDVVREDLFPG--GRAPLVVCNPPWVPARPTSPVEYAVYDPGGRM-L 266

Query: 197 DGGIDGLSHY 206
            G +D L+ +
Sbjct: 267 HGFLDSLAGH 276


>gi|289433610|ref|YP_003463482.1| hypothetical protein lse_0241 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169854|emb|CBH26392.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 201

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +N++ T  +  F        +++L++S   FSL  +  +    ILD+G G G + L + K
Sbjct: 27  FNMQFTSDNGVFSKNTVDFGSQVLIES---FSLQEVSGK----ILDVGCGYGPMGLTVAK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           E P  +   VD++ +ALE+A  NA  N ++       S + +  +  +  I+SNPP
Sbjct: 80  EFPESQVDMVDVNLRALELAGENAKLNQITNVRIYESSVYENVADEDYQAIISNPP 135


>gi|206900806|ref|YP_002250671.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
           H-6-12]
 gi|226710073|sp|B5YDR3|PRMA_DICT6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|206739909|gb|ACI18967.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
           H-6-12]
          Length = 301

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + + K+    K  G+DI  KA+E+AK NA  N V   F   Q++    
Sbjct: 169 VLDVGTGSGILSI-VAKKLGAGKVKGIDIDKKAVEVAKENAKRNNVELEFQ--QANLTIG 225

Query: 161 VEGLFDVIVSN 171
           +E  +D++V+N
Sbjct: 226 IEDKYDIVVAN 236


>gi|153829160|ref|ZP_01981827.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875349|gb|EDL73484.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 240

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S +G F  I+ NPPY  S
Sbjct: 106 LPS-KG-FAAIICNPPYFNS 123


>gi|226364323|ref|YP_002782105.1| hypothetical protein ROP_49130 [Rhodococcus opacus B4]
 gi|226242812|dbj|BAH53160.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 215

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 9/104 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  GTGA+ +A        +   VD+S +A    + NA+  G   R   ++ D   
Sbjct: 32  RVLDLCAGTGALSVAAAAAG-AGRVTAVDVSRRAAISIRLNALARG--HRIRVIRGDLTE 88

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            V E  FDV+VSNPPY+ +  VD     V D  P  + D G +G
Sbjct: 89  HVRENRFDVVVSNPPYVPAP-VDT----VPDRGPARAWDAGKNG 127


>gi|117164577|emb|CAJ88123.1| putative trans-aconitate methyltransferase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 302

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           RI+DLG GTG    ALL   P      VD S   L+  ++ A  +G++ER  T+Q+D
Sbjct: 68  RIVDLGCGTGTGTFALLDRFPGAHVTAVDASAALLQHLRAKAGAHGLAERVRTVQAD 124


>gi|75907118|ref|YP_321414.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413]
 gi|75700843|gb|ABA20519.1| UbiE/COQ5 methyltransferase [Anabaena variabilis ATCC 29413]
          Length = 220

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158
           +LD GTGT  + + + ++ P ++ V +D++   L+IA  +   +G+ E  R + + +   
Sbjct: 46  VLDAGTGTARIPVLICQKRPRWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRL 105

Query: 159 SSVEGLFDVIVSN 171
              +G+FD++VSN
Sbjct: 106 PYEDGIFDLVVSN 118


>gi|307708536|ref|ZP_07645001.1| methyltransferase small domain superfamily [Streptococcus mitis
           NCTC 12261]
 gi|307615452|gb|EFN94660.1| methyltransferase small domain superfamily [Streptococcus mitis
           NCTC 12261]
          Length = 126

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 16  VDINNRALDLARQNAERNKVEATI--FQSNIYEQVEGTFDHVISNPP 60


>gi|306822412|ref|ZP_07455790.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679]
 gi|304553957|gb|EFM41866.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679]
          Length = 219

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SERFDTLQSDW 157
           LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+    +   D +  D 
Sbjct: 81  LDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAATADEIPHDL 140

Query: 158 FSSVEGLFDVIVSNPP 173
                  FD+I SNPP
Sbjct: 141 ------TFDLIWSNPP 150


>gi|302562332|ref|ZP_07314674.1| methylase [Streptomyces griseoflavus Tu4000]
 gi|302479950|gb|EFL43043.1| methylase [Streptomyces griseoflavus Tu4000]
          Length = 223

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELL  +     +P         +LD+GTG  +  LA+       +   VD+S 
Sbjct: 16  YAPQEDTELLAGALSDEPVP-----PDAAVLDVGTG--SGALAVAAARRGCRVTAVDVSW 68

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +A+  A+ NA+  GV  R    + D F  V G  FD++++NPPY+ +
Sbjct: 69  RAVGTARLNALRAGVPVRVR--RGDLFGPVRGESFDLVLANPPYVPA 113


>gi|325177054|emb|CCA21009.1| dimethyladenosine transferase putative [Albugo laibachii Nc14]
          Length = 323

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 9/91 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFK--GVGVDIS-CKALEIA-KSNAVTNGVS---ERFD 151
           +R+L++G+GTG +  ALL   P  +  GV  D S  K+LE    S   T+ +     R +
Sbjct: 57  IRVLEIGSGTGNLTAALLDVDPTIQVHGVECDASMVKSLEDRFPSQLRTSQLQLHVNRIE 116

Query: 152 TLQ-SDWFSSVEGLFDVIVSNPPY-IESVIV 180
            L+ SD FSS +GL D +V+N PY + S+I+
Sbjct: 117 KLRLSDLFSSSQGLIDAVVANIPYQLSSLII 147


>gi|46199805|ref|YP_005472.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus
           thermophilus HB27]
 gi|61217295|sp|Q72HI4|UBIE_THET2 RecName: Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|46197432|gb|AAS81845.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus
           thermophilus HB27]
          Length = 220

 Score = 43.5 bits (101), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TGTG + L L + +P  + VG D +   L IA+  A   G+  RF    +    
Sbjct: 39  RILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEADALALP 98

Query: 160 SVEGLFDVI 168
             +G FD +
Sbjct: 99  FPDGAFDAV 107


>gi|312794827|ref|YP_004027749.1| methyltransferase [Burkholderia rhizoxinica HKI 454]
 gi|312166602|emb|CBW73605.1| Methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454]
          Length = 383

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +  ALL      + +  D+  +AL+ A+ N    G+S + + +++D F  + 
Sbjct: 208 DIGTGTGVIA-ALLARRGVRRVIATDVDSRALDCARENVARLGLSAQVEVVRADLF-PLS 265

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               ++V NPP++ +     +   V D D R+ L G + GL  +
Sbjct: 266 RRAPLVVCNPPWVPARPSASIEHAVFDPDSRM-LRGFLAGLPAH 308


>gi|171742499|ref|ZP_02918306.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC
           27678]
 gi|171278113|gb|EDT45774.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC
           27678]
          Length = 216

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+      + +D     
Sbjct: 78  LDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIG-TIHAVTADEIPH- 135

Query: 162 EGLFDVIVSNPP 173
           +  FD+I SNPP
Sbjct: 136 DLTFDLIWSNPP 147


>gi|119719434|ref|YP_919929.1| methyltransferase small [Thermofilum pendens Hrk 5]
 gi|119524554|gb|ABL77926.1| methyltransferase [Thermofilum pendens Hrk 5]
          Length = 210

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 17/115 (14%)

Query: 73  EPRPETEL---LVDSALAFSLPRIEK---RDVV--RILDLGTGTGAVCLALLKESPFFKG 124
            P P+ EL      S LA +L  I +   +D+   ++LDLG GTG + +     +    G
Sbjct: 19  HPSPKIELEQYATPSTLAATLLWIAQEHFQDISGKKVLDLGCGTGRLGIG----AALLGG 74

Query: 125 VGV--DISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEG-LFDVIVSNPPY 174
           + V  D+   A+  AKS A+  GV ER D L +D       EG LFD +V NPP+
Sbjct: 75  IVVMLDLDFSAVSEAKSAAIRLGVYERVDLLVADVRLIPLREGILFDTVVENPPF 129


>gi|90413137|ref|ZP_01221133.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           3TCK]
 gi|90325828|gb|EAS42280.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           3TCK]
          Length = 339

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +  + P  +    DIS  A+E AK     N +  +F    +D +S
Sbjct: 202 KVLDFGCGAGVLGAIMKAKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYS 259

Query: 160 SVEGLFDVIVSNPPY 174
            +EG ++ ++SNPP+
Sbjct: 260 ELEGPYNYLISNPPF 274


>gi|298368399|ref|ZP_06979717.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282402|gb|EFI23889.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 335

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G +  A+L +    +   +D + KA+  A +N    G+ ++      D F   
Sbjct: 160 FDIGTGSGVIA-AILAKRGIPEITAIDTNPKAIACATANLARLGLDKQVAVQAVDLFP-- 216

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++              +GV +HLN  G
Sbjct: 217 EGRADLIVCNPPWLPAKPTSA--VETALYDPDNAM---------LTAFLNGVRQHLNPQG 265


>gi|226289837|gb|EEH45321.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 333

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 21/114 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCK 132
           PE  +   ++  F L     +    ILDLGTG G++ LALL++   F+    VGVD S K
Sbjct: 101 PEKVMKFLTSECFPLAPCNTQSQPIILDLGTGNGSM-LALLRDEGGFEASRMVGVDYSPK 159

Query: 133 ALEIAK-------SNAVTNGVS----ERFDTLQS------DWFSSVEGLFDVIV 169
           ++E+A+       + A ++ +S    E +D   +      DWF + EG FD+++
Sbjct: 160 SIELARRLHDGSTTTAQSSDLSRIRFEVWDVFDNRPVQTLDWFPAAEGGFDIVL 213


>gi|116629036|ref|YP_814208.1| 16S RNA G1207 methylase RsmC [Lactobacillus gasseri ATCC 33323]
 gi|116094618|gb|ABJ59770.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus gasseri ATCC
           33323]
          Length = 217

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   VD++ +A+++AK NA  N + +  +  +S+ +  
Sbjct: 80  ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 138

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 139 VDNKYGLIITNPP 151


>gi|238789815|ref|ZP_04633597.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii
           ATCC 33641]
 gi|238722174|gb|EEQ13832.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii
           ATCC 33641]
          Length = 293

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGYLGLSGVLATQAAGVAQ 268


>gi|332344450|gb|AEE57784.1| methyltransferase small domain protein [Escherichia coli UMNK88]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY E   V+C
Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VEC 132


>gi|302525712|ref|ZP_07278054.1| rRNA/tRNA methylase [Streptomyces sp. AA4]
 gi|302434607|gb|EFL06423.1| rRNA/tRNA methylase [Streptomyces sp. AA4]
          Length = 507

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 76  PETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE  +L     + SL R   +R V  +LDLGTG G   L   + +   +    D+S +AL
Sbjct: 143 PEDHVLGVGHASLSLIRATSRRPVGTLLDLGTGNGVQALHATRHAQ--RVTATDVSARAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
            +A      N +    + L+ +WF+ V    FD IV NPP++
Sbjct: 201 ALAAGTFRLNELE--VELLRGEWFAPVARRRFDQIVCNPPFV 240


>gi|300742198|ref|ZP_07072219.1| putative transferase [Rothia dentocariosa M567]
 gi|300381383|gb|EFJ77945.1| putative transferase [Rothia dentocariosa M567]
          Length = 575

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 12/92 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+  V R LD+GTG G     LL  +        DIS +AL  A+ N + N  + + D  
Sbjct: 187 ERTPVARALDVGTGCGIQTFHLLAHADHV--TATDISPRALAFARFNLLLNAPALKLDPQ 244

Query: 154 ---------QSDWFSSVEG-LFDVIVSNPPYI 175
                    Q      V G  FD++VSNPP++
Sbjct: 245 NLEARVSLRQGSLLEPVAGEQFDLVVSNPPFV 276


>gi|331654038|ref|ZP_08355039.1| hypothetical protein ECJG_02346 [Escherichia coli M718]
 gi|331048887|gb|EGI20963.1| hypothetical protein ECJG_02346 [Escherichia coli M718]
          Length = 285

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+GTG+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 IQQWVTQQTARFDLIISNPPYYQQ 168


>gi|297580787|ref|ZP_06942713.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535203|gb|EFH74038.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 240

 Score = 43.5 bits (101), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQEAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 LPSKR--FAAIICNPPYFNS 123


>gi|282898198|ref|ZP_06306189.1| conserved hypothetical protein (probable Methyltransferase
           activity) [Raphidiopsis brookii D9]
 gi|281196729|gb|EFA71634.1| conserved hypothetical protein (probable Methyltransferase
           activity) [Raphidiopsis brookii D9]
          Length = 393

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P+   VG+DIS   LE+A+    +
Sbjct: 40  AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVS 170
           +G +   F  L       + G FD+I S
Sbjct: 100 SGANRVEFHHLSIYDLDQIPGKFDLINS 127


>gi|237736938|ref|ZP_04567419.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420800|gb|EEO35847.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 226

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTG G + + L  ++     VG+DI  +   +A  N   N + E  + +  D   
Sbjct: 44  KVLDIGTGNGIIPILLYAKNKSRDIVGIDIQEENSSLAIRNIELNKLEEYIEIVNYDVKE 103

Query: 160 SVEG-LFDVIVSNPPYIE 176
              G  FD IVSNPPY++
Sbjct: 104 YPFGNSFDYIVSNPPYMK 121


>gi|115753806|ref|XP_001193617.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115928551|ref|XP_001183726.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 638

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 89  SLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           S+P+IE+R    +RILDLG G G   LA  +  P    VG+D S +A+   K  A   G+
Sbjct: 441 SMPQIEERMKSGIRILDLGCGRGLASLAFAESYPNSTVVGLDFSEEAINYGKERAKEKGL 500

Query: 147 S------ERFDTLQSDWFSSVEGLF 165
           +      E    +  DW ++++ ++
Sbjct: 501 TNVEFIREDAACIPDDWNNTIDYIY 525


>gi|298491945|ref|YP_003722122.1| type 11 methyltransferase ['Nostoc azollae' 0708]
 gi|298233863|gb|ADI64999.1| Methyltransferase type 11 ['Nostoc azollae' 0708]
          Length = 395

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  ++  VRILD G G+G     L+  +P  + VG+D+S   LE+AK    +
Sbjct: 40  AAYNFCTGRKPQKQDVRILDAGCGSGVSTEYLVHLNPHAQIVGIDLSAGTLEVAKKRCQS 99

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168
           +G     F  L       + G FD+I
Sbjct: 100 SGADRVEFHHLSIYDVEQIPGKFDLI 125


>gi|217076536|ref|YP_002334252.1| ribosomal protein L11 methyltransferase [Thermosipho africanus
           TCF52B]
 gi|259534593|sp|B7IFP7|PRMA_THEAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|217036389|gb|ACJ74911.1| ribosomal protein L11 methyltransferase [Thermosipho africanus
           TCF52B]
          Length = 260

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 9/98 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+ A+   L K+    + +GVD    A+E AK N   N V    +  QSD FS+
Sbjct: 136 VLDLGCGS-AILSILAKKLGADRVLGVDNDPLAVEAAKENVERNNVD--VEIRQSDLFSN 192

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           V+G FD+IVSN      +I + L   ++D    +  DG
Sbjct: 193 VDGKFDLIVSN------IIAEILIEALKDLPKFLKKDG 224


>gi|320170209|gb|EFW47108.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 347

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI----SCKALEIAKSN 140
           ALA S PR +  +V ++LD+G G+G   +A+ + +P FKGV ++I     C ALE     
Sbjct: 164 ALAAS-PRFKALNVTKLLDVGGGSGCFPIAMAQANPAFKGVVMEIDTVGKC-ALEFVAEA 221

Query: 141 AVTNGVSERFDTLQSD-WFSSVEGLFDVIVSN 171
            V+  ++     +  D W +  EG   V  SN
Sbjct: 222 KVSEQITTIARNMFKDAWPTPAEGFNGVFFSN 253


>gi|78043617|ref|YP_358926.1| hypothetical protein CHY_0054 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995732|gb|ABB14631.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 249

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R++DLGTG G V L L  +     K  G++I  K  ++A  +   N + E+ + +  D  
Sbjct: 50  RVVDLGTGNGVVPLLLYGRNREIGKIYGIEIQEKLYQLAVKSVALNNLEEKIEIILGDLK 109

Query: 159 SSVEGL---FDVIVSNPPY 174
            +   L   FDV+ +NPPY
Sbjct: 110 DAPAILGKGFDVVTANPPY 128


>gi|162420605|ref|YP_001605751.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola]
 gi|165937513|ref|ZP_02226076.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|270488616|ref|ZP_06205690.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27]
 gi|21956886|gb|AAM83806.1|AE013621_6 methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           KIM 10]
 gi|45438490|gb|AAS64036.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|162353420|gb|ABX87368.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola]
 gi|165914618|gb|EDR33232.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|270337120|gb|EFA47897.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27]
          Length = 306

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 175 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 231

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215
             E   DV+V+N           L   +R+  P IS+    GG  GLS    T A GV++
Sbjct: 232 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 281


>gi|309750161|gb|ADO80145.1| Putative methyltransferase [Haemophilus influenzae R2866]
          Length = 240

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLK---ESPFFKGVGVD-ISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ILD+G+GTG + L L +   E+   + V +D I+ K  +   +N+V     +   T    
Sbjct: 47  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHIQLIQTDIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130


>gi|254467260|ref|ZP_05080671.1| methyltransferase small [Rhodobacterales bacterium Y4I]
 gi|206688168|gb|EDZ48650.1| methyltransferase small [Rhodobacterales bacterium Y4I]
          Length = 255

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 6/81 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P     GV++     ++A+ NA  NG  +  D  ++D  + 
Sbjct: 49  VLELGCGAGQALLCLGARVPGLALAGVELQAPYADLARRNAAANG--QAIDVHEADLSAL 106

Query: 161 VEGL----FDVIVSNPPYIES 177
            E L    F  +++NPPY ++
Sbjct: 107 PEALKLRQFHHVIANPPYYKA 127


>gi|150398939|ref|YP_001322706.1| methyltransferase small [Methanococcus vannielii SB]
 gi|150011642|gb|ABR54094.1| methyltransferase small [Methanococcus vannielii SB]
          Length = 198

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 17/117 (14%)

Query: 64  RLTLSSDT--FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           R +  +D+  F P+     TE+LV+      L  +   DV   LD+G G G V ++++ E
Sbjct: 25  RFSFKTDSGVFSPKKIDKGTEILVNE-----LELLSSDDV---LDIGCGYGVVGISIVAE 76

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIVSNPP 173
                    DI+ +++ +AK N   N +S++  D +Q D + +V+   +D+I+SNPP
Sbjct: 77  VNSI--TMTDINKRSVNLAKHNLKLNNISDKNIDVVQGDVYENVKCKNYDIIISNPP 131


>gi|111021800|ref|YP_704772.1| methyltransferase [Rhodococcus jostii RHA1]
 gi|110821330|gb|ABG96614.1| possible methyltransferase [Rhodococcus jostii RHA1]
          Length = 215

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 16/134 (11%)

Query: 71  TFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            + P+ +T+LL D   A  L P        R+LDL  GTGA+ +         +   VD+
Sbjct: 8   VYRPQHDTQLLADVLAAEHLGPH------SRVLDLCAGTGALSVRAAAAG-AGRVTAVDV 60

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           S +A    + N++  G   R   +  D    V +  FDV+VSNPPY+ ++I D     V 
Sbjct: 61  SRRAAISIRLNSLVGG--HRIRVIHGDLVEQVRDERFDVVVSNPPYVPAMI-DA----VP 113

Query: 189 DFDPRISLDGGIDG 202
           D  P  + D G +G
Sbjct: 114 DRGPARAWDAGKNG 127


>gi|15612610|ref|NP_240913.1| hypothetical protein BH0047 [Bacillus halodurans C-125]
 gi|10172659|dbj|BAB03766.1| BH0047 [Bacillus halodurans C-125]
          Length = 246

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 8/95 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+K D   ILDL TG G V L LL E    + VGV+I  +  E+A  N+  N + ++   
Sbjct: 44  IQKGD---ILDLCTGNGIVPL-LLTERSKARMVGVEIQERLFEMAIRNSQLNDLEQQLTF 99

Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIESVIVDCL 183
           +  D     + +    FDV+  NPPY  ++  D L
Sbjct: 100 MNLDLKDLPKNMPMHSFDVVTCNPPYFANLNEDLL 134


>gi|288957175|ref|YP_003447516.1| SAM-dependent methyltransferase [Azospirillum sp. B510]
 gi|288909483|dbj|BAI70972.1| SAM-dependent methyltransferase [Azospirillum sp. B510]
          Length = 403

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 17/114 (14%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIES 177
           + VD S  ALE A   A  NGV++RF+  ++D F  +E L      F V+V++PP +++S
Sbjct: 255 IAVDRSALALENATRAAEANGVADRFEARKADAFQELERLNAAGETFQVVVADPPAFVKS 314

Query: 178 ---VIVDCLGL-EVRDFDPRISLDGGI---DGLSHY---RTIADGVSRHLNKDG 221
              + V C    ++     RI+  GG       SH     T A+ V+R LN  G
Sbjct: 315 KKDLAVGCRAYRKMARLAARITAPGGYLLCGSCSHNVDPPTFAEQVARGLNDAG 368


>gi|254508234|ref|ZP_05120358.1| SmtA protein [Vibrio parahaemolyticus 16]
 gi|219548851|gb|EED25852.1| SmtA protein [Vibrio parahaemolyticus 16]
          Length = 235

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGTG + L   +  P      +DI   A + A SN   +   +R    Q D  ++
Sbjct: 42  LLDIGTGTGLLALMCAQRKPTLTIDAIDIDQNACDAAISNFSNSPWQDRLTLHQGDILNA 101

Query: 161 -VEGLFDVIVSNPPYIES 177
                FD I+ NPPY  S
Sbjct: 102 EFSHRFDAIICNPPYFNS 119


>gi|167768115|ref|ZP_02440168.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1]
 gi|167709639|gb|EDS20218.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1]
 gi|291559966|emb|CBL38766.1| Predicted O-methyltransferase [butyrate-producing bacterium SSC/2]
          Length = 244

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + + +  ++      G++I  +  E+A  +   N + ++ + ++ D   
Sbjct: 43  RVLDLGTGTGILPILMEAKTKAVHLTGLEIQPEMAEMAARSVKLNHLEDKIEIVEGDIKE 102

Query: 160 S----VEGLFDVIVSNPPYI 175
           +        FD I SNPPY+
Sbjct: 103 ASAIFSHDSFDTITSNPPYM 122


>gi|290559022|gb|EFD92401.1| Methyltransferase type 11 [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 246

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 13/77 (16%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RIL+LG G G V +AL KE     GV  G+DIS K +  A  NA + GV+  F  +    
Sbjct: 53  RILELGCGAGQVSIALAKEG----GVCTGIDISEKQIAKAIKNAKSEGVNVNFVIMP--- 105

Query: 158 FSSVEGL----FDVIVS 170
           FSS++ L    FD+++S
Sbjct: 106 FSSIKKLLKTKFDIVIS 122


>gi|224001076|ref|XP_002290210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973632|gb|EED91962.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 242

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 36/159 (22%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---- 95
           +A + SLKH      L  RD+ +V        +EP  +T LL+D A+   +  IE     
Sbjct: 5   SAEMPSLKH------LRMRDYDSV--------YEPSDDTYLLID-AIGMDIDAIEDDGDD 49

Query: 96  ------RDVVRILDLGTGTGA----VCLALLKESPFF--KGVGVDISCKALEIAKSNAVT 143
                 + + R L++G GTG     + + LL     +  K    DI+  A+ IA++ A  
Sbjct: 50  RNNDGIKRIKRTLEIGCGTGVPSVYLAMRLLAHGKDYDVKHFVTDINPDAIRIAQATADI 109

Query: 144 NGV-SERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
           N + S  F  +Q D  S     +E   DV++ NPPY+ +
Sbjct: 110 NNIPSADFHPIQCDLASQLLPEMENKIDVLIFNPPYVPT 148


>gi|238853614|ref|ZP_04643983.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
 gi|311111169|ref|ZP_07712566.1| 16S RNA methylase [Lactobacillus gasseri MV-22]
 gi|238833758|gb|EEQ26026.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
 gi|311066323|gb|EFQ46663.1| 16S RNA methylase [Lactobacillus gasseri MV-22]
          Length = 203

 Score = 43.5 bits (101), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   VD++ +A+++AK NA  N + +  +  +S+ +  
Sbjct: 66  ILDVGTGYGPMGLFAAKFWPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQ 124

Query: 161 VEGLFDVIVSNPP 173
           V+  + +I++NPP
Sbjct: 125 VDNKYGLIITNPP 137


>gi|189425799|ref|YP_001952976.1| methyltransferase small [Geobacter lovleyi SZ]
 gi|189422058|gb|ACD96456.1| methyltransferase small [Geobacter lovleyi SZ]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DLGTG G + L L + +        +    A  +A+ N   NG++ER   L  D    
Sbjct: 47  IVDLGTGCGVMALVLARMAAAAHITAFEQDDAAASLARQNVGLNGLAERVTVLHDDVLQV 106

Query: 161 VEGL----FDVIVSNPPY 174
              L     D++VSNPPY
Sbjct: 107 RRHLPVSSCDLVVSNPPY 124


>gi|326402390|ref|YP_004282471.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum
           AIU301]
 gi|325049251|dbj|BAJ79589.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum
           AIU301]
          Length = 305

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 80  LLVDSALAF-------------SLPRIEKRDVV-RILDLGTGTG--AVCLALLKESPFFK 123
           +L+D+ LAF             +L R+ KR    RILDLGTG+G  A+  A +   P   
Sbjct: 123 VLLDAGLAFGTGEHGSTRGCLLALERLAKRRAPGRILDLGTGSGILAITAAKIWGKPVLA 182

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
               DI  +A+ +A +NA  NGV+     + SD +S+
Sbjct: 183 ---TDIDQRAVRVASANAALNGVAPLLRVIGSDGWSA 216


>gi|254776010|ref|ZP_05217526.1| hypothetical protein MaviaA2_15260 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 250

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107
           +T S D  +P    E+  D   +  LP     D      VVR           +LD GTG
Sbjct: 1   MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAIKGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   S  F   G+D S  A+E A++NA   GVS  F+   +      +G FD 
Sbjct: 61  PG--HHAIYYASQGFSATGIDGSAAAIERARANAHKAGVSVNFELADATKLDGFDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|108809659|ref|YP_653575.1| ribosomal protein L11 methyltransferase [Yersinia pestis Antiqua]
 gi|108813676|ref|YP_649443.1| ribosomal protein L11 methyltransferase [Yersinia pestis Nepal516]
 gi|145597578|ref|YP_001161654.1| ribosomal protein L11 methyltransferase [Yersinia pestis Pestoides
           F]
 gi|165927551|ref|ZP_02223383.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166214163|ref|ZP_02240198.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167420502|ref|ZP_02312255.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425493|ref|ZP_02317246.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470297|ref|ZP_02335001.1| ribosomal protein L11 methyltransferase [Yersinia pestis FV-1]
 gi|108777324|gb|ABG19843.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Nepal516]
 gi|108781572|gb|ABG15630.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Antiqua]
 gi|145209274|gb|ABP38681.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Pestoides F]
 gi|165920445|gb|EDR37722.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166204650|gb|EDR49130.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961308|gb|EDR57329.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167055507|gb|EDR65300.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 173 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 229

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215
             E   DV+V+N           L   +R+  P IS+    GG  GLS    T A GV++
Sbjct: 230 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 279


>gi|309777091|ref|ZP_07672057.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915161|gb|EFP60935.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 441

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 29/178 (16%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD------------FYNVR 64
           + S Q+  + + V +  +      +I+ +L   + + ILG ++             ++++
Sbjct: 204 VHSFQIPHEKEMVRELSEALPFVKSIIVNLNQRTDNVILGEKEKLLYGERVIVDSIHDLK 263

Query: 65  LTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++SS +F    P+ +TE+L   AL F+  ++  ++ V  LDL  G G + + L +++  
Sbjct: 264 FSISSKSFYQVNPK-QTEVLYGKALEFA--QLTGKETV--LDLYCGVGTISMFLAQQARH 318

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
               G++I  +A++ A+ NA  NG++   + + SD  S  + L       DVIV +PP
Sbjct: 319 V--TGIEIVPQAIQDARKNAALNGIA-NIEFVCSDAASYAKKLCEQGMHLDVIVVDPP 373


>gi|307324372|ref|ZP_07603580.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
 gi|306890103|gb|EFN21081.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
          Length = 267

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 33/57 (57%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           RILDLG+GTGA  LALL+     +   VD S + L+  +  A   GV +R   +Q+D
Sbjct: 34  RILDLGSGTGAGTLALLQRFEDTEATAVDRSPRLLDHIRGKARARGVEDRVRAVQAD 90


>gi|15790238|ref|NP_280062.1| hypothetical protein VNG1163G [Halobacterium sp. NRC-1]
 gi|169235967|ref|YP_001689167.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1]
 gi|10580698|gb|AAG19542.1| protoporphyrinogen oxidase [Halobacterium sp. NRC-1]
 gi|167727033|emb|CAP13819.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1]
          Length = 191

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 23/191 (12%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFF 122
           R    +D ++P  +T LL  +A+       E  D   R+LD+GTG+G V  A +++    
Sbjct: 7   RRGAGADVYQPAEDTHLLATAAVG------ELDDPYARVLDVGTGSGYVA-ATVRDETGA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             VG D++  A+  A    V          ++ D  +   +  FD +V NPPY+      
Sbjct: 60  DVVGTDLNPFAVRQAADRGVP--------VVRGDLVAPFRDDAFDAVVFNPPYLPRED-- 109

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               + RD    ++L GG  G     +  D V R L  DG+  + +     VD V  +  
Sbjct: 110 ----DTRDDWMDVALSGGDTGRRVIESFFDAVGRVLAPDGVVIMLVSTLTGVDEVAAYAG 165

Query: 242 RKLFLVNAFKD 252
            + F   A  +
Sbjct: 166 DRGFSAAAISE 176


>gi|84500215|ref|ZP_00998481.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597]
 gi|84392149|gb|EAQ04417.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597]
          Length = 257

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G GA  L L +     +  G++      E+A+ NA+ NG++  F+ ++ D    
Sbjct: 46  VLDLGCGAGAASLCLGRRVAGLRLTGLERQPVYAELARRNAIENGLA--FEVVEGDLSDM 103

Query: 161 VEGL----FDVIVSNPPY 174
              L    FD +++NPPY
Sbjct: 104 PTHLRQRSFDHVIANPPY 121


>gi|170767237|ref|ZP_02901690.1| putative methyltransferase [Escherichia albertii TW07627]
 gi|170123571|gb|EDS92502.1| putative methyltransferase [Escherichia albertii TW07627]
          Length = 245

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+GTG+G + L L + +     +  V++  +A   A+ N   +  + R +   +D
Sbjct: 45  VKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELDSEAATQAQENVAQSPWAHRVNVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W S     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWISRQTTRFDLIISNPPYYQQG-VEC 132


>gi|77458323|ref|YP_347828.1| methyltransferase small [Pseudomonas fluorescens Pf0-1]
 gi|77382326|gb|ABA73839.1| Putative methyltransferase, small [Pseudomonas fluorescens Pf0-1]
          Length = 317

 Score = 43.5 bits (101), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+G G G   + + +     + + VDI+  AL +   NA    V+   +   SD   
Sbjct: 140 RAVDIGCGAGVGAILIGRARREAQVLAVDINPAALRLTTINAALAEVAN-VEVRASDVLQ 198

Query: 160 SVEGLFDVIVSNPPYI 175
            V+G FD+IV+NPPY+
Sbjct: 199 GVDGEFDLIVANPPYM 214


>gi|225619645|ref|YP_002720902.1| Modification methylase [Brachyspira hyodysenteriae WA1]
 gi|225214464|gb|ACN83198.1| Modification methylase [Brachyspira hyodysenteriae WA1]
          Length = 406

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P+   +LL+   +  S    EK+D V+ILD   G+G   L+  +     K  G DI  
Sbjct: 28  FTPKSIRDLLLKELVYIS----EKKDNVKILDPACGSGEFLLSCNEYFKIPKLYGFDIDE 83

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
             + I+K   + N   +  D+L+ D   S++  +D ++ NPPY E
Sbjct: 84  SLVSISKK-LIKNADIKCLDSLKLDTKKSIK--YDYVIGNPPYFE 125


>gi|330507706|ref|YP_004384134.1| methylase [Methanosaeta concilii GP-6]
 gi|328928514|gb|AEB68316.1| methylase, putative [Methanosaeta concilii GP-6]
          Length = 167

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 15/128 (11%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E R    +L++G G+G V L L ++      V +DI+  A+   +   V        + +
Sbjct: 7   EARPEDHVLEVGCGSGLVSLELARQVESL--VALDINPHAVRATRERGV--------EVI 56

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +SD F  + G FD+I+ NPPY+ +        E  D     +LDGG  G          +
Sbjct: 57  RSDLFEGIRGKFDLIIFNPPYLPTKQA-----ERSDQWINYALDGGESGRETIGRFLLDL 111

Query: 214 SRHLNKDG 221
           + HL   G
Sbjct: 112 AEHLRPGG 119


>gi|309802490|ref|ZP_07696596.1| methyltransferase small domain protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|308220890|gb|EFO77196.1| methyltransferase small domain protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 216

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SERFDTLQSDW 157
           LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+    +   D +  D 
Sbjct: 78  LDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAATADEIPHDL 137

Query: 158 FSSVEGLFDVIVSNPP 173
                  FD+I SNPP
Sbjct: 138 ------TFDLIWSNPP 147


>gi|254410508|ref|ZP_05024287.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
 gi|196182714|gb|EDX77699.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
          Length = 258

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  LA S+ R       RILDLG GTG +   +L+     + VGVD S + +E A +   
Sbjct: 45  DEMLA-SIARCIPSQAKRILDLGCGTGELSFKVLQRCRDVQVVGVDYSPRMIEFATTKLE 103

Query: 143 TNGVSERFDTLQ---SDWFS---SVEGLFDVIVSN 171
           T G  +++  ++    DW +   SV G FD  VS+
Sbjct: 104 TAGYRQQWTGIEGDFGDWANHQLSVGGGFDACVSS 138


>gi|119946653|ref|YP_944333.1| rRNA (guanine-N(2)-)-methyltransferase [Psychromonas ingrahamii 37]
 gi|226712969|sp|A1SZ19|RSMC_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|119865257|gb|ABM04734.1| 16S rRNA m(2)G 1207 methyltransferase [Psychromonas ingrahamii 37]
          Length = 349

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   +LK+ P      VDI+  AL  AK +  +N +    +   S+ FS
Sbjct: 210 RVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFALASAKLSLQSNQLEG--NVFPSNVFS 267

Query: 160 SVEGLFDVIVSNPPY 174
            ++  +++++SNPP+
Sbjct: 268 DIKEKYNILLSNPPF 282


>gi|320527675|ref|ZP_08028849.1| methyltransferase small domain protein [Solobacterium moorei F0204]
 gi|320131996|gb|EFW24552.1| methyltransferase small domain protein [Solobacterium moorei F0204]
          Length = 199

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + +      P  +    DI+ +A+E+A+ N   N V     TL SD ++
Sbjct: 60  RILDMGCGYGTLGIITKSLFPSSEVTMADINPRAVELAQLNCGLNQV--ECTTLVSDGYA 117

Query: 160 SVEGLFDVIVSNPP 173
             +G +  I++NPP
Sbjct: 118 ETKGQYHFIITNPP 131


>gi|289209527|ref|YP_003461593.1| methyltransferase small [Thioalkalivibrio sp. K90mix]
 gi|288945158|gb|ADC72857.1| methyltransferase small [Thioalkalivibrio sp. K90mix]
          Length = 205

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 10/134 (7%)

Query: 44  RSLKHESIHRILGWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
           R ++   + R L + D     ++R   +   F PR      +D      L RIE R    
Sbjct: 11  RRIRQAELKRDLEFDDTLAGESLRFRTTWGLFSPR-----RIDDGTRMLLDRIEVRPSDD 65

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            LDLG G G + L L +++P      VD +  A+E ++ NA  NG++   + + S+  + 
Sbjct: 66  CLDLGCGYGPIGLTLARKAPQGITTLVDTNFLAVEYSRRNAELNGITN-VECVTSNGLAQ 124

Query: 161 V-EGLFDVIVSNPP 173
           + +  FD++ SN P
Sbjct: 125 IRDRRFDLVASNLP 138


>gi|225850601|ref|YP_002730835.1| methyltransferase small [Persephonella marina EX-H1]
 gi|225646244|gb|ACO04430.1| methyltransferase small [Persephonella marina EX-H1]
          Length = 246

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 9/101 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS +  S P I K+   +I+DLGTG+G + + L  + P  +   ++I     ++AK N 
Sbjct: 30  IDSVILSSFPEITKKKG-KIIDLGTGSGIILILLSLKYPDLEFHAIEIQEDLFDMAKRNF 88

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
             N V+   + ++ D    ++ L     FD +++NPPY + 
Sbjct: 89  ELNRVN--VNLIKGD-IKDIKKLYQPQYFDYVITNPPYFKK 126


>gi|149174999|ref|ZP_01853623.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797]
 gi|148846336|gb|EDL60675.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797]
          Length = 191

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 39/78 (50%), Gaps = 2/78 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
           R+LDLG G G V +   K       V  D+   A+ I+K NA  N  +     LQSD F 
Sbjct: 44  RVLDLGCGCGVVGILAAKIVGAENVVMTDVDADAVRISKKNAERNAAAG-VTVLQSDGFR 102

Query: 159 SSVEGLFDVIVSNPPYIE 176
              E  F+ I+SNPPY E
Sbjct: 103 DHQETDFEWILSNPPYHE 120


>gi|47096510|ref|ZP_00234101.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015101|gb|EAL06043.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 204

 Score = 43.5 bits (101), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +A+E+AK NA  N ++       S + +
Sbjct: 65  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNTHIYESSVYDN 124

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 125 VTANDYQAIISNPP 138


>gi|311112122|ref|YP_003983344.1| methyltransferase [Rothia dentocariosa ATCC 17931]
 gi|310943616|gb|ADP39910.1| methyltransferase [Rothia dentocariosa ATCC 17931]
          Length = 578

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 12/92 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+  V R LD+GTG G     LL  +        DIS +AL  A+ N + N  + + D  
Sbjct: 190 ERTPVARALDVGTGCGIQTFHLLAHADHV--TATDISPRALAFARFNLLLNAPALKLDPQ 247

Query: 154 ---------QSDWFSSVEG-LFDVIVSNPPYI 175
                    Q      V G  FD++VSNPP++
Sbjct: 248 NLEARVSLRQGSLLDPVAGEQFDLVVSNPPFV 279


>gi|328880746|emb|CCA53985.1| hypothetical protein SVEN_0698 [Streptomyces venezuelae ATCC 10712]
          Length = 256

 Score = 43.5 bits (101), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 40/69 (57%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L +L  +P  KG+G+DI+ + L   ++ A T G+++R + ++     +
Sbjct: 41  VLDIGCGWGELLLRILDAAPEAKGIGLDINAEDLARGRALAETRGLADRVEFVEESALGT 100

Query: 161 VEGLFDVIV 169
             G  D I+
Sbjct: 101 ERGPVDAIL 109


>gi|302873193|ref|YP_003841826.1| Methyltransferase type 11 [Clostridium cellulovorans 743B]
 gi|307688642|ref|ZP_07631088.1| Methyltransferase type 11 [Clostridium cellulovorans 743B]
 gi|302576050|gb|ADL50062.1| Methyltransferase type 11 [Clostridium cellulovorans 743B]
          Length = 253

 Score = 43.1 bits (100), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 19/43 (44%), Positives = 27/43 (62%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +++DLGTGTG +   L KE+P  + VG+DI   AL+     AV
Sbjct: 48  KLMDLGTGTGYIAFTLAKENPNLQIVGLDIVTNALKANTEKAV 90


>gi|194290563|ref|YP_002006470.1| methyltransferase, methylase of polypeptide chain release factors
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224398|emb|CAQ70409.1| putative methyltransferase, putative Methylase of polypeptide chain
           release factors [Cupriavidus taiwanensis LMG 19424]
          Length = 385

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ N    G + + + +++D F +  
Sbjct: 212 DIGTGTG-VLAAVLARRGVHRVVATDQDARALACARENIARLGYAAQVEVIEADLFPA-- 268

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++ +     +   V D D  + L G + GL+ +
Sbjct: 269 GRAPLVVCNPPWVPARPSSPVERAVYDPDSTM-LRGFLQGLAEH 311


>gi|212224934|ref|YP_002308170.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009891|gb|ACJ17273.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus
           NA1]
          Length = 396

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 11/83 (13%)

Query: 99  VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +++LD+ T TG  A+  A+       K V VD S +A+E+AK NA  NGV++R + +   
Sbjct: 219 MKVLDVFTYTGGFAIHAAVAGAE---KVVAVDKSPRAIEMAKENAKLNGVADRMEFIVGS 275

Query: 157 WFSSVEGL------FDVIVSNPP 173
            F  +E +      FD+++ +PP
Sbjct: 276 AFPVMEEMIKRGEKFDIVILDPP 298


>gi|254415542|ref|ZP_05029302.1| Methyltransferase small domain superfamily [Microcoleus
           chthonoplastes PCC 7420]
 gi|196177723|gb|EDX72727.1| Methyltransferase small domain superfamily [Microcoleus
           chthonoplastes PCC 7420]
          Length = 217

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--- 154
           V  ILD+GTGTG V L L + S       V+I  +A   A+ N   +   +R    Q   
Sbjct: 19  VQSILDIGTGTGLVALMLAQRSQAHID-AVEIDAEAGIQARENVAKSPWRDRIQVYQGSV 77

Query: 155 SDWFSSVEGLFDVIVSNPPYIESV 178
            D+ ++    +D+IVSNPP+ ++ 
Sbjct: 78  QDYATTCSKRYDLIVSNPPFFDNA 101


>gi|119510422|ref|ZP_01629556.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
 gi|119464951|gb|EAW45854.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
          Length = 305

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  E +V  AL  ++ +++ R   RILDLG GTG+  L L +  P  + +G+D+S   L 
Sbjct: 83  PPNETVVRQALIDAI-KVKPR---RILDLGCGTGSTTLKLKQAFPQAEVIGLDLSPYMLV 138

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A+  A   G+   ++   ++  +  E  FD++ ++  + E+  V C  +    F   ++
Sbjct: 139 RAEDKARNAGLDIHWEHGNAETTNFPEAHFDLVTASLLFHETPSVVCQAVLRESFRLLVA 198

Query: 196 ------LDGGIDGLSHYRTIAD 211
                 LDG  + L H   + D
Sbjct: 199 GGQVLILDGNQNTLRHLHWLND 220


>gi|113868957|ref|YP_727446.1| methylase of polypeptide chain release factors [Ralstonia eutropha
           H16]
 gi|113527733|emb|CAJ94078.1| methylase of polypeptide chain release factors [Ralstonia eutropha
           H16]
          Length = 387

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ N    G +   + +Q+D F   E
Sbjct: 214 DIGTGTG-VLAAVLARRGVQRVVATDQDPRALACARENIAQLGYAGEVEIVQADLFP--E 270

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++ +     +   V D D  + L G + GL+ +
Sbjct: 271 GRAPLVVCNPPWVPARPSSPVERAVYDPDSAM-LRGFLQGLAEH 313


>gi|262172262|ref|ZP_06039940.1| predicted O-methyltransferase [Vibrio mimicus MB-451]
 gi|261893338|gb|EEY39324.1| predicted O-methyltransferase [Vibrio mimicus MB-451]
          Length = 239

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 14/149 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +     +   +DI   A +  K N+  +  + R   LQ+D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATKKNSENSPWANRIQCLQTDVRYW 105

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
             +    F  I+ NPPY  S      G   + F    +   G   L H   I + + + L
Sbjct: 106 HPTQR--FSAIICNPPYFNS------GETAQQFARATARHTG--SLKHQELI-ECLPQLL 154

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             DG+ S  +   +    + + E   L+L
Sbjct: 155 ESDGVASFILPKTEGDQFIALAEQAGLYL 183


>gi|262037783|ref|ZP_06011225.1| methyltransferase [Leptotrichia goodfellowii F0264]
 gi|261748255|gb|EEY35652.1| methyltransferase [Leptotrichia goodfellowii F0264]
          Length = 243

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 12/101 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +I  R   ++LD+GTG G + + LL E    + VG+++  +  +IA+ N 
Sbjct: 31  LDTVLLADFTKIN-RKTKKVLDIGTGCGIIPI-LLAEKSKAEIVGIELQKEMADIAERNV 88

Query: 142 VTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPYIE 176
                 ER + +  D       F   E  FD IV+NPPY E
Sbjct: 89  --QNYEERINIINDDIKNYQKIFKKDE--FDCIVTNPPYFE 125


>gi|302191386|ref|ZP_07267640.1| hypothetical protein LineA_05182 [Lactobacillus iners AB-1]
 gi|309803952|ref|ZP_07698035.1| RNA methyltransferase, RsmD family [Lactobacillus iners LactinV
           11V1-d]
 gi|309809287|ref|ZP_07703156.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN
           2503V10-D]
 gi|312871393|ref|ZP_07731488.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           3008A-a]
 gi|312872331|ref|ZP_07732401.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2062A-h1]
 gi|312875499|ref|ZP_07735502.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2053A-b]
 gi|315653469|ref|ZP_07906390.1| methyltransferase [Lactobacillus iners ATCC 55195]
 gi|308163954|gb|EFO66218.1| RNA methyltransferase, RsmD family [Lactobacillus iners LactinV
           11V1-d]
 gi|308170400|gb|EFO72424.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN
           2503V10-D]
 gi|311089010|gb|EFQ47451.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2053A-b]
 gi|311092154|gb|EFQ50528.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2062A-h1]
 gi|311093046|gb|EFQ51395.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           3008A-a]
 gi|315489160|gb|EFU78801.1| methyltransferase [Lactobacillus iners ATCC 55195]
          Length = 182

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+GA+ L  +    +   V VDI+  A EI K N +     ERF+  ++    
Sbjct: 44  RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185
           ++  L      FD++  +PPY +  I+  + +
Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134


>gi|288559415|ref|YP_003422901.1| SAM-dependent methyltransferase HemK-related protein
           [Methanobrevibacter ruminantium M1]
 gi|288542125|gb|ADC46009.1| SAM-dependent methyltransferase HemK-related protein
           [Methanobrevibacter ruminantium M1]
          Length = 194

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 15/138 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
            +E ++   +L++GTG+G V +  +LL +         DI+  ALE+A+ N   N ++  
Sbjct: 25  NLEIKEGQSVLEIGTGSGLVSMYASLLTDDV----TATDINYNALELAEKNFKLNDINTI 80

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R +    D F  V+   FDVI+ N PY+ +   D +  ++       + DGGIDG     
Sbjct: 81  RLEF--GDLFEPVKNEKFDVILFNTPYLPTDTDDIIDDDLN-----YAFDGGIDGRKVID 133

Query: 208 TIADGVSRHLNKDGLCSV 225
              + VS +LN  G+  +
Sbjct: 134 RFINEVSHYLNDGGIVQI 151


>gi|241896317|ref|ZP_04783613.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
 gi|241870297|gb|EER74048.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
          Length = 262

 Score = 43.1 bits (100), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 7/91 (7%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F+ PR   R +   +DLG G GAV L  +      + VGV+I  +  ++A+ + + N ++
Sbjct: 48  FAEPRKNGRGLT--VDLGAGNGAVSL-FMAHKVSGQIVGVEIQERLADMAQRSVMMNDLT 104

Query: 148 ERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174
           ++   + +D    F+ +  G  D++VSNPPY
Sbjct: 105 DKIRIMNADMRDIFNDIRPGSADMVVSNPPY 135


>gi|254787289|ref|YP_003074718.1| RNA methyltransferase [Teredinibacter turnerae T7901]
 gi|237685081|gb|ACR12345.1| putative RNA methyltransferase [Teredinibacter turnerae T7901]
          Length = 399

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
            D S +AL+IA+ NA   G  +RF  L+ D F+S++ L      FDV++ +PP
Sbjct: 251 ADASARALDIAQKNAQLQGGGDRFTALEGDAFASLKALKENDERFDVVIVDPP 303


>gi|195470849|ref|XP_002087719.1| GE15042 [Drosophila yakuba]
 gi|194173820|gb|EDW87431.1| GE15042 [Drosophila yakuba]
          Length = 224

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+ + F   +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLEYLDQLQPRLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            KA    +  A  NG   R D+++     ++     DV++ NPPY   V+     L+ + 
Sbjct: 77  PKACNATRRTATRNGA--RLDSIRCSLADALRSQSVDVLLFNPPY---VVTSDAELQTQQ 131

Query: 190 FD 191
           FD
Sbjct: 132 FD 133


>gi|194098667|ref|YP_002001729.1| hypothetical protein NGK_1104 [Neisseria gonorrhoeae NCCP11945]
 gi|254493768|ref|ZP_05106939.1| methyltransferase [Neisseria gonorrhoeae 1291]
 gi|268599042|ref|ZP_06133209.1| methyltransferase [Neisseria gonorrhoeae MS11]
 gi|268601395|ref|ZP_06135562.1| methyltransferase [Neisseria gonorrhoeae PID18]
 gi|268686667|ref|ZP_06153529.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|291043772|ref|ZP_06569488.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193933957|gb|ACF29781.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512808|gb|EEH62153.1| methyltransferase [Neisseria gonorrhoeae 1291]
 gi|268583173|gb|EEZ47849.1| methyltransferase [Neisseria gonorrhoeae MS11]
 gi|268585526|gb|EEZ50202.1| methyltransferase [Neisseria gonorrhoeae PID18]
 gi|268626951|gb|EEZ59351.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012235|gb|EFE04224.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 135

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + +A+  A++N    G  ++ +  ++D F   
Sbjct: 35  FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP-- 91

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           EG  D+IV NPP++ +       +E   +DP  ++
Sbjct: 92  EGFADLIVCNPPWLPAKPTSA--VESALYDPESAM 124


>gi|145628789|ref|ZP_01784589.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae
           22.1-21]
 gi|145638667|ref|ZP_01794276.1| phosphatidylserine synthase [Haemophilus influenzae PittII]
 gi|144979259|gb|EDJ88945.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae
           22.1-21]
 gi|145272262|gb|EDK12170.1| phosphatidylserine synthase [Haemophilus influenzae PittII]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLK---ESPFFKGVGVD-ISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ILD+G+GTG + L L +   E+   + V +D I+ K  +   +N+V     +   T    
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHIQLIQTDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|256845193|ref|ZP_05550651.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|256718752|gb|EEU32307.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2]
          Length = 223

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 56/99 (56%), Gaps = 8/99 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    VG+DI  + ++ A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANM 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
               N + +  +F+ +    +  +   FDVI+SNPPY++
Sbjct: 87  ALELNKIEKNIQFECMDIREYK-ISNYFDVIISNPPYMD 124


>gi|226506076|ref|NP_001150241.1| LOC100283871 [Zea mays]
 gi|195637752|gb|ACG38344.1| hemK methyltransferase family member 2 [Zea mays]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%)

Query: 70  DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123
           D +EP  ++  LVD+ L+    L  ++ R     +++G+G+G V     + L +     +
Sbjct: 49  DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 105

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            +  DI+  A E  ++    +GV    D + +D  S ++    G+ DV V NPPY+ + +
Sbjct: 106 YLATDINQHAAETTQATLEAHGV--HADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV 163

Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223
             V C G+         S  GG++G      I   V   L++ G              +C
Sbjct: 164 EEVGCRGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 216

Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +  E+GY  +V + R  E   L+++  ++D
Sbjct: 217 HLMSEMGYASRVILKRCTEEESLYVLKFWRD 247


>gi|226530570|ref|NP_001141264.1| hypothetical protein LOC100273353 [Zea mays]
 gi|194703640|gb|ACF85904.1| unknown [Zea mays]
          Length = 278

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%)

Query: 70  DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123
           D +EP  ++  LVD+ L+    L  ++ R     +++G+G+G V     + L +     +
Sbjct: 49  DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 105

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            +  DI+  A E  ++    +GV    D + +D  S ++    G+ DV V NPPY+ + +
Sbjct: 106 YLATDINQHAAETTQATLEAHGV--HADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV 163

Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223
             V C G+         S  GG++G      I   V   L++ G              +C
Sbjct: 164 EEVGCRGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 216

Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +  E+GY  +V + R  E   L+++  ++D
Sbjct: 217 HLMSEMGYASRVILKRCTEEESLYVLKFWRD 247


>gi|297618846|ref|YP_003706951.1| type I restriction-modification system, M subunit [Methanococcus
           voltae A3]
 gi|297377823|gb|ADI35978.1| type I restriction-modification system, M subunit [Methanococcus
           voltae A3]
          Length = 514

 Score = 43.1 bits (100), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K+D+  + D   G+G++ L + KE+   K  G ++      +A+ N + + VS ++FD  
Sbjct: 222 KKDLKSVYDPTCGSGSLLLRISKEADVRKFYGQEVISTTYNLARMNMLLHNVSYDKFDIQ 281

Query: 154 QSDWFSSVEGL---FDVIVSNPPYIES 177
             D   + + L   FD +V+NPPY ++
Sbjct: 282 NDDVLENPKHLGKKFDAVVANPPYSQT 308


>gi|242037567|ref|XP_002466178.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor]
 gi|241920032|gb|EER93176.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 40/211 (18%)

Query: 70  DTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFK 123
           D +EP  ++  LVD+ L+    L  ++ R     +++G+G+G V     + L +     +
Sbjct: 51  DVYEPCDDSFALVDALLSDKAQLLTLQPR---LCMEVGSGSGYVITSLAIMLRQLGSGAQ 107

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            +  DI+  A E  ++    +GV    D + +D  S ++    G+ DV V NPPY+ + +
Sbjct: 108 YLATDINQHAAETTQATLEAHGV--HADVIVTDIVSGLDKRLAGMVDVAVVNPPYVPTPV 165

Query: 180 --VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LC 223
             V C G+         S  GG++G      I   V   L++ G              +C
Sbjct: 166 EEVGCKGIAS-------SWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDIC 218

Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +  E+GY  +V + R  E   L+++  ++D
Sbjct: 219 HLMSEMGYASRVVLKRCTEEESLYVLKFWRD 249


>gi|256394651|ref|YP_003116215.1| methyltransferase type 12 [Catenulispora acidiphila DSM 44928]
 gi|256360877|gb|ACU74374.1| Methyltransferase type 12 [Catenulispora acidiphila DSM 44928]
          Length = 511

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 31/45 (68%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + + +  R+LDLG G GA+   LLK+  F + VG+D+S +AL+IA
Sbjct: 296 LHEAEASRVLDLGCGEGALLRDLLKDKAFTEVVGIDVSARALQIA 340


>gi|205353685|ref|YP_002227486.1| hypothetical protein SG2626 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857996|ref|YP_002244647.1| hypothetical protein SEN2569 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|262828602|sp|B5QTV6|TRMN6_SALEP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828609|sp|B5RD57|TRMN6_SALG2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|205273466|emb|CAR38443.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709799|emb|CAR34151.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085537|emb|CBY95316.1| Uncharacterized adenine-specific methylase PM0390 [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|326628789|gb|EGE35132.1| Methyltransferase small [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF----D 151
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R     D
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRITVHTD 103

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIE 176
            +QS W       FD+I+SNPPY E
Sbjct: 104 DIQS-WAPRQTVRFDLIISNPPYYE 127


>gi|37527224|ref|NP_930568.1| hypothetical protein plu3348 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81833921|sp|Q7N1W7|TRMN6_PHOLL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|36786658|emb|CAE15722.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 244

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           D   ILD+G G+G + L L + +     +  V++  +A   A+ NA  +    + D  Q 
Sbjct: 43  DKKAILDIGCGSGLIALMLAQRTDENTKIDAVELDTEAALQAQDNAEQSPWQRKIDVYQQ 102

Query: 156 D---WFSSVEGLFDVIVSNPPYIESVIV 180
           D   +       +D+IVSNPPY E  + 
Sbjct: 103 DIGDFAEQYSQCYDLIVSNPPYFEPAVA 130


>gi|302529500|ref|ZP_07281842.1| ElmF protein [Streptomyces sp. AA4]
 gi|302438395|gb|EFL10211.1| ElmF protein [Streptomyces sp. AA4]
          Length = 376

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLGTGTG V  A+L      + V  D++  A+  A+ N    G+S+R    ++D + S
Sbjct: 198 VFDLGTGTG-VLAAILARRGAAEVVATDLNPLAVRCARDNLRRLGLSDRVQVRETDLWPS 256

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRT 208
            +   D++V NPP++       L L +  +DP  + L+  +DGL  + T
Sbjct: 257 -DRRADLVVCNPPWLPGNPSSALELGI--YDPSSAMLNRFLDGLPGHLT 302


>gi|266620882|ref|ZP_06113817.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi
           DSM 13479]
 gi|288867462|gb|EFC99760.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi
           DSM 13479]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+++ +  + +DLGTGTG + + L  +       G++I  +  ++A  + 
Sbjct: 32  MDAVLLSGFARVKQGE--KAIDLGTGTGIIPILLEAKYEGEHYTGLEIQDEMADMAARSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             N + E+   ++ D   +        FDV+ SNPPY+     D  GL+  D    IS
Sbjct: 90  ALNHLEEKVSIVKGDIKEASRLFGAASFDVVTSNPPYMN----DAHGLKNPDLPKAIS 143


>gi|15606087|ref|NP_213464.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
 gi|2983274|gb|AAC06868.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
          Length = 239

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 9/108 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+P+ E ++ VD  L  S  +  KR+  RI+DLG G G + + L K+    K V  +   
Sbjct: 20  FQPK-EHKISVDLVLFLSKIKPPKRNY-RIIDLGAGFGFLSITLAKKYG-VKVVAFEYDE 76

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174
           + +++ + N   NGV    + ++ D    +E     G F+++VSNPP+
Sbjct: 77  RMVKLLRKNVKLNGVEHLVEVVEGD-IKEIEKHLSRGSFNLVVSNPPF 123


>gi|168748353|ref|ZP_02773375.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113]
 gi|168757761|ref|ZP_02782768.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401]
 gi|168768680|ref|ZP_02793687.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486]
 gi|168778554|ref|ZP_02803561.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076]
 gi|168801695|ref|ZP_02826702.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508]
 gi|195936723|ref|ZP_03082105.1| hypothetical protein EscherichcoliO157_09715 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208812457|ref|ZP_03253786.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208821308|ref|ZP_03261628.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209400058|ref|YP_002272050.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115]
 gi|254794526|ref|YP_003079363.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|262827974|sp|B5Z149|TRMN6_ECO5E RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828092|sp|C6UQY1|TRMN6_ECO5T RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|188017117|gb|EDU55239.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113]
 gi|189003446|gb|EDU72432.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076]
 gi|189355296|gb|EDU73715.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401]
 gi|189362238|gb|EDU80657.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486]
 gi|189376185|gb|EDU94601.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508]
 gi|208733734|gb|EDZ82421.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208741431|gb|EDZ89113.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209161458|gb|ACI38891.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115]
 gi|254593926|gb|ACT73287.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
              W +     FD+I+SNPPY E   V+C   +        SLD
Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VECATPQREQARYTTSLD 147


>gi|229165871|ref|ZP_04293637.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH621]
 gi|228617576|gb|EEK74635.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH621]
          Length = 538

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 24/99 (24%)

Query: 97  DVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGVS 147
           D  R+ D   G+G++ L +  E P         F+   G +++     +A+ N + +GV+
Sbjct: 215 DQFRVYDPTMGSGSLLLTVQNELPNGDEEGSVEFY---GQELNTTTYNLARMNLMMHGVN 271

Query: 148 ------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174
                 +R DTL +DW F+  +G      FD +V+NPPY
Sbjct: 272 YRNMELKRADTLDADWPFAEKDGTQIPLKFDAVVANPPY 310


>gi|224585023|ref|YP_002638822.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469551|gb|ACN47381.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|255068177|ref|ZP_05320032.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255047604|gb|EET43068.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 372

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G +  A+L +    + +  D + KA+  A +N    G+ ++      D F   
Sbjct: 197 FDIGTGSGVIA-AILAKRGISEIIATDTNPKAIACATANLARLGLDKQVVVQAVDLFP-- 253

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++              +GV +HLN  G
Sbjct: 254 EGRADLIVCNPPWLPAKPTSA--VEAALYDPDNAM---------LTAFLNGVQQHLNPQG 302


>gi|218248299|ref|YP_002373670.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|257060374|ref|YP_003138262.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|218168777|gb|ACK67514.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
 gi|256590540|gb|ACV01427.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 250

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  + + +V + LDLG G G +  A+ +  P  KG  +DIS   +E AK N + +    +
Sbjct: 43  LINLTQPNVDKFLDLGCGNGILGKAIYQNYPTAKGFFIDISDTMIEAAK-NTLNSDYESK 101

Query: 150 F---DTLQSDWFSSV--EGLFDVIVS 170
           F   D  Q+ W + +  E  FDVIVS
Sbjct: 102 FIIEDFSQNTWINCIIQEAPFDVIVS 127


>gi|149192207|ref|ZP_01870424.1| predicted O-methyltransferase [Vibrio shilonii AK1]
 gi|148833965|gb|EDL50985.1| predicted O-methyltransferase [Vibrio shilonii AK1]
          Length = 240

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + RD   ILD+GTGTG + L + +     +   +DI   A++ A+ N   +    R   L
Sbjct: 39  QYRDSTHILDIGTGTGLLSLMIAQRYSDAQITSIDIDAVAIQDAELNVNRSPWHSRVSLL 98

Query: 154 QSDWFSS-VEGLFDVIVSNPPYIES 177
            SD  ++     F  I+ NPPY  S
Sbjct: 99  HSDVLTTPFSESFSGIICNPPYFNS 123


>gi|41408894|ref|NP_961730.1| hypothetical protein MAP2796c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41397253|gb|AAS05113.1| hypothetical protein MAP_2796c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 250

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD------VVR-----------ILDLGTG 107
           +T S D  +P    E+  D   +  LP     D      VVR           +LD GTG
Sbjct: 1   MTASFDPADPARFEEMYRDQRTSHGLPAATPWDIGGPQPVVRQLVALGAVKGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   S  F   G+D S  A+E A++NA   GVS  F+   +      +G FD 
Sbjct: 61  PG--HHAIYYASQGFSATGIDGSAAAIERARANARKAGVSVNFELADATKLDGFDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|325577156|ref|ZP_08147640.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392]
 gi|325160738|gb|EGC72859.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           D  RILD+GTGTG V L L + S  +  +  +++   A + A+ N   +    R      
Sbjct: 35  DCQRILDMGTGTGLVALMLAQRSHEYCQIEAIELDPLAAQQAQENFKASPWHNRLHLTHQ 94

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   +       +D+IV+NPPY
Sbjct: 95  DVQTYCQKTAHQYDLIVANPPY 116


>gi|319441089|ref|ZP_07990245.1| methylase of peptide chain release factors [Corynebacterium
           variabile DSM 44702]
          Length = 348

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 49/259 (18%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR- 100
           + R    E +  ILG      V L +    F PRPET+LL+D A +    RI   +  R 
Sbjct: 76  VERRAAREPLQFILGTAPVVGVDLAVGPGVFIPRPETDLLIDWAAS----RITDWETRRR 131

Query: 101 --------------ILDLGTGTGAVCLAL--------LKESPFFKGVGVDISCKALEIAK 138
                         ++D  +G G + L L        L +    + +G+++S  AL+ A 
Sbjct: 132 STPLRAALVPPRFTVVDFCSGPGTISLGLAHMLTRSRLADRLDLRIIGIELSPTALDYAG 191

Query: 139 SNA--------VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGL 185
            N         +   ++  F    +   + V GL      D+++SNPPY+        G 
Sbjct: 192 RNLSDWQARGDIDPRIAVEFHRGDATDAALVTGLGLVAGADLVLSNPPYVPE---GDHGE 248

Query: 186 EVRDFDPRISLD------GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            V   DP +  D       G DGL   R +A  ++         +VE        V  + 
Sbjct: 249 HVAAADPEVGADPHEAVYSGADGLELMRPLARIIAMTCAPHAEIAVEHDDATGQQVRELL 308

Query: 240 ESRKLFLVNAFKDYGGNDR 258
               +      +D+ G DR
Sbjct: 309 ADAGIADPVQHRDFAGRDR 327


>gi|260576243|ref|ZP_05844235.1| methyltransferase small [Rhodobacter sp. SW2]
 gi|259021511|gb|EEW24815.1| methyltransferase small [Rhodobacter sp. SW2]
          Length = 252

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G   L L    P     G+++     ++A+ NA  NG++   + ++ D  + 
Sbjct: 47  VLDLGCGAGTAVLCLGARVPGLALAGLELQADYADLARRNAARNGLA--LEVVEGD-LAQ 103

Query: 161 VEGL----FDVIVSNPPYIESV 178
           + G+    FD +++NPPY  + 
Sbjct: 104 MPGVLLRDFDHVIANPPYYPTT 125


>gi|300770016|ref|ZP_07079895.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762492|gb|EFK59309.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 21/164 (12%)

Query: 98  VVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              ILD+GTGTG + L L +  E+   + V +D    A + AK N + +  SER    Q 
Sbjct: 37  AAHILDIGTGTGVIALMLAQRFENAILEAVEID--ALAADRAKQNFLNSPFSERM-YAQH 93

Query: 156 DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             F  +  +  +D+I+SNPP+      D L     + D R       D L  +  + D  
Sbjct: 94  VSFEDLHPVSKYDLIISNPPF----YTDSL----HNPDNRKKTARHAD-LPFFERLFDFA 144

Query: 214 SRHLNKDGLCSVEI-----GYNQKVDVVRIFESRKLFLVNAFKD 252
            RHL ++GL  + +     G  Q +   +   +  +  V ++KD
Sbjct: 145 GRHLMEEGLLRLILPPELAGQLQDIATTQELIAEHVIAVQSYKD 188


>gi|254900563|ref|ZP_05260487.1| hypothetical protein LmonJ_12134 [Listeria monocytogenes J0161]
 gi|254913486|ref|ZP_05263498.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937933|ref|ZP_05269630.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|258610542|gb|EEW23150.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293591494|gb|EFF99828.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 201

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +A+E+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|115522664|ref|YP_779575.1| methyltransferase small [Rhodopseudomonas palustris BisA53]
 gi|115516611|gb|ABJ04595.1| methyltransferase small [Rhodopseudomonas palustris BisA53]
          Length = 291

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 7/78 (8%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R++++GTG+G  A+  AL   S     + +DI+  A+  A+ NA  NGV  + +   SD 
Sbjct: 116 RVVEVGTGSGILAISAALAGASHV---LALDINPNAVRAARMNANFNGVGAQSEARVSDL 172

Query: 158 FSSVEG--LFDVIVSNPP 173
           FS++     FDV++S+PP
Sbjct: 173 FSALAADEKFDVVISSPP 190


>gi|213691732|ref|YP_002322318.1| methyltransferase small [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213523193|gb|ACJ51940.1| methyltransferase small [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 218

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153
           LDLG G G + L L  ESP      VD++ +AL++  +NA  NG        V E    L
Sbjct: 63  LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 122

Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173
               Q  +  +V G   FDVI SNPP
Sbjct: 123 PAENQPAFCETVPGDLTFDVIWSNPP 148


>gi|168765032|ref|ZP_02790039.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501]
 gi|168790376|ref|ZP_02815383.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869]
 gi|217327142|ref|ZP_03443225.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588]
 gi|261222989|ref|ZP_05937270.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259461|ref|ZP_05951994.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|262831357|sp|Q8XA22|TRMN6_ECO57 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|189365091|gb|EDU83507.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501]
 gi|189370140|gb|EDU88556.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869]
 gi|217319509|gb|EEC27934.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588]
 gi|320188916|gb|EFW63575.1| putative methyltransferase [Escherichia coli O157:H7 str. EC1212]
 gi|320640824|gb|EFX10318.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320646170|gb|EFX15110.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320651465|gb|EFX19861.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320657067|gb|EFX24886.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320662732|gb|EFX30071.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667552|gb|EFX34472.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326345064|gb|EGD68808.1| putative methyltransferase [Escherichia coli O157:H7 str. 1044]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY E   V+C
Sbjct: 105 IQQWVTQQTARFDLIISNPPYYEQG-VEC 132


>gi|16761501|ref|NP_457118.1| hypothetical protein STY2835 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140802|ref|NP_804144.1| hypothetical protein t0268 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052329|ref|ZP_03345207.1| hypothetical protein Salmoneentericaenterica_04976 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425268|ref|ZP_03358018.1| hypothetical protein SentesTyphi_06008 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213585705|ref|ZP_03367531.1| hypothetical protein SentesTyph_32327 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213646346|ref|ZP_03376399.1| hypothetical protein SentesTy_02809 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865165|ref|ZP_03387284.1| hypothetical protein SentesT_35611 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825493|ref|ZP_06544700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|81853238|sp|Q8Z4J9|TRMN6_SALTI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|25325409|pir||AC0830 conserved hypothetical protein STY2835 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503801|emb|CAD02791.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136427|gb|AAO67993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     V  V++   A   A+ N   +    R  T+ +
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127


>gi|20093502|ref|NP_613349.1| RNA methylase [Methanopyrus kandleri AV19]
 gi|19886334|gb|AAM01279.1| Predicted RNA methylase [Methanopyrus kandleri AV19]
          Length = 204

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LDLG GTG + + A L  +     V VD   KA+E+A+ N    GV +R + +++D  
Sbjct: 50  RVLDLGAGTGRIGIGAALAGACEVTCVEVD--SKAVEVARRNVKRAGVEDRVEVVEADVR 107

Query: 159 S-SVEGLFDVIVSNPPY 174
               E  +DV + NPP+
Sbjct: 108 DFEPEDQYDVTIMNPPF 124


>gi|294505249|ref|YP_003569311.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003]
 gi|262367310|gb|ACY63867.1| ribosomal protein L11 methyltransferase [Yersinia pestis D182038]
 gi|294355708|gb|ADE66049.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003]
          Length = 266

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 135 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 191

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215
             E   DV+V+N           L   +R+  P IS+    GG  GLS    T A GV++
Sbjct: 192 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 241


>gi|260890353|ref|ZP_05901616.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
           F0254]
 gi|260859973|gb|EEX74473.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
           F0254]
          Length = 228

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 10/101 (9%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L     +I  R   +ILD+GTG G + L L + S   +  G+++     EIA  N 
Sbjct: 14  LDSVLLADFVKIN-RKTKKILDIGTGCGIIALLLAQRSK-AQITGIELQETMAEIAIRNI 71

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176
             N    +   +  D       F+  E  FD IV+NPPY E
Sbjct: 72  NGNKFQNQVKIINEDIKNYKNIFNRDE--FDTIVTNPPYFE 110


>gi|229520952|ref|ZP_04410374.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80]
 gi|229342185|gb|EEO07181.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80]
 gi|259156558|gb|ACV96501.1| methyltransferase [Vibrio fluvialis Ind1]
          Length = 240

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSKR--FAAIICNPPYFNS 123


>gi|212545214|ref|XP_002152761.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210065730|gb|EEA19824.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 156

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 10/87 (11%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G++  Y+ + TL++       +     +S  AF LP IEK D  RILD+G G G +    
Sbjct: 9   GYKQGYS-KYTLAT-------QQSRTAESYAAFLLPHIEKGD--RILDVGCGPGTITTGF 58

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAV 142
            K       VG+DIS + L+ AK +A 
Sbjct: 59  AKYVSGGSVVGIDISTEVLQNAKESAA 85


>gi|194446650|ref|YP_002042487.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|229564345|sp|B4T690|RLMG_SALNS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|194405313|gb|ACF65535.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|62181737|ref|YP_218154.1| hypothetical protein SC3167 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197248542|ref|YP_002148150.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|75480702|sp|Q57JN9|RLMG_SALCH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564339|sp|B5F6B6|RLMG_SALA4 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|62129370|gb|AAX67073.1| paral putative methyltransferase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|197212245|gb|ACH49642.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|322716223|gb|EFZ07794.1| Ribosomal RNA large subunit methyltransferase G [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|282901083|ref|ZP_06309016.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505]
 gi|281194174|gb|EFA69138.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505]
          Length = 393

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P+   VG+DIS   LE+A+    +
Sbjct: 40  AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVS 170
           +G +   F  L       + G FD+I S
Sbjct: 100 SGANRVEFHHLSIYDVDQIPGKFDLINS 127


>gi|218547897|ref|YP_002381688.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           fergusonii ATCC 35469]
 gi|262828282|sp|B7LUY9|TRMN6_ESCF3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218355438|emb|CAQ88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|323978395|gb|EGB73480.1| gyfiC [Escherichia coli TW10509]
 gi|324113102|gb|EGC07078.1| hypothetical protein ERIG_02707 [Escherichia fergusonii B253]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINIYPAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTARFDLIISNPPYYQQG-VEC 132


>gi|39998409|ref|NP_954360.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|39985356|gb|AAR36710.1| ribosomal protein L11 methyltransferase, putative [Geobacter
           sulfurreducens PCA]
 gi|298507353|gb|ADI86076.1| methyltransferase, putative [Geobacter sulfurreducens KN400]
          Length = 198

 Score = 43.1 bits (100), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L RI     +R LDLG+GTG + +A ++       V VDI  KA     +N   NGV++R
Sbjct: 54  LERIPGLTGMRGLDLGSGTGILAIAAVRLGAASV-VAVDIDPKAAASCAANVRLNGVADR 112

Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171
             T+  +  S   GL+D++++N
Sbjct: 113 VFTVCGELASVGRGLYDLLMAN 134


>gi|299530724|ref|ZP_07044139.1| methyltransferase small [Comamonas testosteroni S44]
 gi|298721240|gb|EFI62182.1| methyltransferase small [Comamonas testosteroni S44]
          Length = 404

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G GTG +   LLK       V  D S +AL  A  N    G + R +   +D F+  +
Sbjct: 230 DIGVGTGVLSALLLKRG-VKSVVATDTSERALACACENLQRLGHASRVELQHADLFA--Q 286

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++       L   + D D R+ L G + GL+ +
Sbjct: 287 GQAGLIVCNPPWLPGKAASVLDQAIYDEDSRM-LRGFLQGLAAH 329


>gi|227357396|ref|ZP_03841752.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           ATCC 29906]
 gi|227162476|gb|EEI47470.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+  G G +   L K++P  K    D++  A+  + +    N +  R   + S+ +S+
Sbjct: 200 LLDMACGCGVIATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 257

Query: 161 VEGLFDVIVSNPPY 174
           VE  +D IVSNPP+
Sbjct: 258 VEETYDWIVSNPPF 271


>gi|153949340|ref|YP_001399381.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|153997406|ref|ZP_02022506.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125]
 gi|161484913|ref|NP_667555.2| ribosomal protein L11 methyltransferase [Yersinia pestis KIM 10]
 gi|161511288|ref|NP_995159.2| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|166011411|ref|ZP_02232309.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167401975|ref|ZP_02307458.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|170022705|ref|YP_001719210.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|218930666|ref|YP_002348541.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92]
 gi|229836800|ref|ZP_04456965.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Pestoides A]
 gi|229839301|ref|ZP_04459460.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229899863|ref|ZP_04515004.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904174|ref|ZP_04519285.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Nepal516]
 gi|38605410|sp|Q8ZAX6|PRMA_YERPE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166989901|sp|A7FDQ3|PRMA_YERP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710129|sp|B1JKF2|PRMA_YERPY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|115349277|emb|CAL22244.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92]
 gi|149289043|gb|EDM39123.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125]
 gi|152960835|gb|ABS48296.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|165989795|gb|EDR42096.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167048561|gb|EDR59969.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|169749239|gb|ACA66757.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|229678292|gb|EEO74397.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Nepal516]
 gi|229687355|gb|EEO79430.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695667|gb|EEO85714.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705743|gb|EEO91752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Pestoides A]
 gi|262363312|gb|ACY60033.1| ribosomal protein L11 methyltransferase [Yersinia pestis D106004]
 gi|320017180|gb|ADW00752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 293

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 218

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215
             E   DV+V+N           L   +R+  P IS+    GG  GLS    T A GV++
Sbjct: 219 PAELSADVVVAN----------ILAGPLRELAPLISVLPTTGGHLGLSGVLATQAAGVAQ 268


>gi|119026137|ref|YP_909982.1| hypothetical protein BAD_1119 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765721|dbj|BAF39900.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 203

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + LAL   SP      +D++ +ALE+ + NA  NG+        +D   + 
Sbjct: 65  LDLGCGWGPIALALGFASPKADIWALDVNERALELTRRNAELNGMG-NIHAATADGIPA- 122

Query: 162 EGLFDVIVSNPP 173
           E  FD+I SNPP
Sbjct: 123 ETTFDLIWSNPP 134


>gi|312873984|ref|ZP_07734020.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2052A-d]
 gi|325911478|ref|ZP_08173889.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 143-D]
 gi|311090533|gb|EFQ48941.1| RNA methyltransferase, RsmD family [Lactobacillus iners LEAF
           2052A-d]
 gi|325476678|gb|EGC79833.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 143-D]
          Length = 182

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+GA+ L  +    +   V VDI+  A EI K N +     ERF+  ++    
Sbjct: 44  RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185
           ++  L      FD++  +PPY +  I+  + +
Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134


>gi|227114012|ref|ZP_03827668.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 295

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS     GG  GLS    T A+GV+ 
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKAGGHLGLSGVLATQAEGVAE 268


>gi|225570297|ref|ZP_03779322.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
           15053]
 gi|225160829|gb|EEG73448.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
           15053]
          Length = 251

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157
           ++ILDLGTG+G +   + K+ P    +G+DI  KALE+ +  A    V    F T     
Sbjct: 47  MKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVN 106

Query: 158 FSSVEGLFDVIVS 170
           F   +  FD+++S
Sbjct: 107 FPFADNEFDMVIS 119


>gi|50083924|ref|YP_045434.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter sp. ADP1]
 gi|81393695|sp|Q6FE96|RSMC_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|49529900|emb|CAG67612.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter sp. ADP1]
          Length = 338

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  LP + +  + +I D G G G +   L + SP  +   +DI   AL   +   
Sbjct: 179 LDIGTAVLLPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDAFALRSTEFTF 238

Query: 142 VTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG+ SER                DVIVSNPP+ + +  D
Sbjct: 239 QRNGLASERLHLHAVTGIQDAPKALDVIVSNPPFHQGIHTD 279


>gi|121728405|ref|ZP_01681433.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675421|ref|YP_001216155.1| hypothetical protein VC0395_A0192 [Vibrio cholerae O395]
 gi|262169960|ref|ZP_06037650.1| predicted O-methyltransferase [Vibrio cholerae RC27]
 gi|121629339|gb|EAX61771.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146317304|gb|ABQ21843.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227012486|gb|ACP08696.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|262021694|gb|EEY40405.1| predicted O-methyltransferase [Vibrio cholerae RC27]
          Length = 240

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSKR--FAAIICNPPYFNS 123


>gi|325496345|gb|EGC94204.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           fergusonii ECD227]
          Length = 239

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 39  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERINIYPAD 98

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 99  IQQWITQQTARFDLIISNPPYYQQG-VEC 126


>gi|308176885|ref|YP_003916291.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307744348|emb|CBT75320.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 201

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + L   ++SP  +  GVD++ +++++A+ NA   G+S            
Sbjct: 60  RILDIGCGWGPITLTAAEQSPDSEVYGVDVNERSIDLARLNATAFGLSNVVVGSPDSIDP 119

Query: 160 SVEGLFDVIVSNPP 173
           S++  FD I SNPP
Sbjct: 120 SLQ--FDTIWSNPP 131


>gi|270263298|ref|ZP_06191568.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13]
 gi|270042986|gb|EFA16080.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13]
          Length = 293

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 IIDFGCGSGILAIAALKLG-AERAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKD--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L DV+V+N
Sbjct: 219 PADLLADVVVAN 230


>gi|28377564|ref|NP_784456.1| 16S RNA methylase [Lactobacillus plantarum WCFS1]
 gi|300769758|ref|ZP_07079640.1| methyltransferase domain protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179717|ref|YP_003923845.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28270396|emb|CAD63299.1| 16S RNA methylase [Lactobacillus plantarum WCFS1]
 gi|300492666|gb|EFK27852.1| methyltransferase domain protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045208|gb|ADN97751.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 202

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG G + +AL  +SP      VD++  AL +A+ N   N ++   +   SD +  
Sbjct: 63  MLDLGTGYGPIGMALAYQSPERTVDMVDVNELALSLARKNVALNQITNT-NIFTSDVYQQ 121

Query: 161 VEGL-FDVIVSNPP 173
           V    +  IV+NPP
Sbjct: 122 VTATNYAAIVTNPP 135


>gi|326789154|ref|YP_004306975.1| methyltransferase small [Clostridium lentocellum DSM 5427]
 gi|326539918|gb|ADZ81777.1| methyltransferase small [Clostridium lentocellum DSM 5427]
          Length = 253

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 12/86 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIA----KSNAVTNGVSERFDTL 153
           ++LD+GTGTG + + +   + + KG   G+DI  + +E+A    K N +   V+ +   +
Sbjct: 51  KVLDIGTGTGIIPIVM--HAIYGKGHFTGIDIQEEMIEMASRSVKLNEIDTDVTMKVMDI 108

Query: 154 Q--SDWFSSVEGLFDVIVSNPPYIES 177
           +   + FS+  G FD+I  NPPY++ 
Sbjct: 109 KDYKEHFST--GYFDIITCNPPYMKG 132


>gi|302535283|ref|ZP_07287625.1| rRNA or tRNA methyltransferase [Streptomyces sp. C]
 gi|302444178|gb|EFL15994.1| rRNA or tRNA methyltransferase [Streptomyces sp. C]
          Length = 504

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 16/134 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +ALE  +     +G  E  + L    F  V
Sbjct: 165 LDLGTGSGIQALHAAQHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGSLFEPV 221

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +  +D+IVSNPP+   VI     L  R        DGG+ G    RT+      HLN  
Sbjct: 222 GDATYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGDHLNPG 270

Query: 221 GLCSVEIGYNQKVD 234
           G     +G  Q V+
Sbjct: 271 GYAQF-LGNWQHVE 283


>gi|325912855|ref|ZP_08175233.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 60-B]
 gi|329921332|ref|ZP_08277770.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 1401G]
 gi|325477848|gb|EGC80982.1| RNA methyltransferase, RsmD family [Lactobacillus iners UPII 60-B]
 gi|328934624|gb|EGG31128.1| RNA methyltransferase, RsmD family [Lactobacillus iners SPIN 1401G]
          Length = 182

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+GA+ L  +    +   V VDI+  A EI K N +     ERF+  ++    
Sbjct: 44  RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKERERFEIFKNSDLR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185
           ++  L      FD++  +PPY +  I+  + +
Sbjct: 103 AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 134


>gi|321310228|ref|YP_004192557.1| type I restriction-modification system, M subunit [Mycoplasma
           haemofelis str. Langford 1]
 gi|319802072|emb|CBY92718.1| type I restriction-modification system, M subunit [Mycoplasma
           haemofelis str. Langford 1]
          Length = 513

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVS-ER 149
           EK  V ++ D   G+G++ L  +K     KGV   G + +     + + N   +G+S   
Sbjct: 213 EKEKVSKVYDPTCGSGSLLLKFMKMYGRDKGVKVYGQENNVTTYNLCRMNMFIHGMSFND 272

Query: 150 FD-----TLQSDWFSSVEGLFDVIVSNPPY 174
           FD     TL     +  EG+FDV++SNPPY
Sbjct: 273 FDICLGDTLGEPCLTHEEGMFDVVISNPPY 302


>gi|304373128|ref|YP_003856337.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1]
 gi|304309319|gb|ADM21799.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1]
          Length = 257

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----W 157
           L++GT   A+ + + +         +DI  KA+E+AK N + N    + + +  D    W
Sbjct: 50  LEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENVILNKKEAQINLITQDFNDFW 109

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--LDGGIDGLS-HYRTIAD 211
                  +  +D+I +NPPY +        L  ++   +IS  L   I  +S +   I  
Sbjct: 110 KEHTKLQKRKYDLIFTNPPYYK--------LGTKNVKKQISEELKKAIYEISINLEQIIL 161

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNA 249
           G S+ + + G+ S+ +   + VDV+ +     FE +K+  + A
Sbjct: 162 GSSKIIQQKGILSMVLPVERLVDVIELLRKYKFEPKKIQFIFA 204


>gi|254719449|ref|ZP_05181260.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|265984454|ref|ZP_06097189.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|306839226|ref|ZP_07472043.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653]
 gi|264663046|gb|EEZ33307.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|306405773|gb|EFM62035.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653]
          Length = 285

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIAKLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|32034232|ref|ZP_00134443.1| COG4123: Predicted O-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 216

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +ILDLGTGTG V + L + +     +  +++   A   A  N   +  S+R    Q D  
Sbjct: 21  QILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQGDVL 80

Query: 159 S-SVEGLFDVIVSNPPY 174
                  FD+IVSNPPY
Sbjct: 81  DYHFHQKFDLIVSNPPY 97


>gi|310780112|ref|YP_003968444.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
 gi|309749435|gb|ADO84096.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
          Length = 245

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V +ILDLGTG G++ + L   S   +  GV+I   + ++A+ N   N + E+   +  
Sbjct: 44  RGVNKILDLGTGNGSIPMLLSSRSK-ARITGVEIQEVSADLARRNIELNKLQEQVGIIHD 102

Query: 156 D---WFSSVE-GLFDVIVSNPPYIE 176
           D   W    + G  D ++SNPP+ +
Sbjct: 103 DLKNWKKHFKTGSQDAVISNPPFFK 127


>gi|261866895|ref|YP_003254817.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412227|gb|ACX81598.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 232

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           +ILDLG G+G + L L + S     +  V+I   A + A+ N   +   ++    Q +  
Sbjct: 37  QILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKIQVYQQNIE 96

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182
            + +  +  FD+IV+NPPY ++  VDC
Sbjct: 97  TFCAQSKHAFDLIVANPPYFQTG-VDC 122


>gi|229491274|ref|ZP_04385100.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121]
 gi|229321813|gb|EEN87608.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121]
          Length = 499

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 11/79 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDT--LQSDW 157
           +LDLGTG G   +  L  + +   V   DI+ +A+++  +    N    R D   LQ  W
Sbjct: 163 VLDLGTGCG---IQALHANTYADSVTATDINQRAVDLTAATMALN----RLDVELLQGSW 215

Query: 158 FSSVEG-LFDVIVSNPPYI 175
           F  VEG  FD +V+NPP++
Sbjct: 216 FEPVEGRTFDQVVANPPFV 234


>gi|291457545|ref|ZP_06596935.1| putative methyltransferase small domain protein [Bifidobacterium
           breve DSM 20213]
 gi|291380598|gb|EFE88116.1| putative methyltransferase small domain protein [Bifidobacterium
           breve DSM 20213]
          Length = 222

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 14/87 (16%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDT 152
           +LDLG G G + LAL   SP      VD++ +ALE+   NA  NG        V E    
Sbjct: 66  VLDLGCGWGPIALALAFASPEANVWAVDVNERALELTHVNAEANGCRNIHTTQVDETSTP 125

Query: 153 LQSDWFSS----VEG--LFDVIVSNPP 173
           L +D  S+    + G   FD I SNPP
Sbjct: 126 LPADRQSAHCEPIPGDLTFDAIWSNPP 152


>gi|163868701|ref|YP_001609913.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP
           105476]
 gi|161018360|emb|CAK01918.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP
           105476]
          Length = 289

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+  +    LDLGTG+G + +A+ K  P    +  DI   A+++A+ N   NGV +    
Sbjct: 146 IKHENPQNALDLGTGSGVLAIAIAKLKP-IAILATDIDPIAIKVAQHNMALNGVEKYITA 204

Query: 153 LQSDWFSSVE----GLFDVIVSN 171
           + +  F+  E      FD+I++N
Sbjct: 205 ITATGFTHNEITSRAPFDLIIAN 227


>gi|126209360|ref|YP_001054585.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae L20]
 gi|262827737|sp|A3N3J4|TRMN6_ACTP2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|126098152|gb|ABN74980.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +     +  +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPY 174
            D         FD+IVSNPPY
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPY 117


>gi|330723241|gb|AEC45611.1| Methyltransferase small domain protein [Mycoplasma hyorhinis MCLD]
          Length = 257

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 23/163 (14%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----W 157
           L++GT   A+ + + +         +DI  KA+E+AK N + N    + + +  D    W
Sbjct: 50  LEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENVILNKKEAQINLITQDFNDFW 109

Query: 158 FSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--LDGGIDGLS-HYRTIAD 211
                  +  +D+I +NPPY +        L  ++   +IS  L   I  +S +   I  
Sbjct: 110 KEHTKLQKRKYDLIFTNPPYYK--------LGTKNVKKQISEELKKAIYEISINLEQIIL 161

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKLFLVNA 249
           G S+ + + G+ S+ +   + VDV+ +     FE +K+  + A
Sbjct: 162 GSSKIIQQKGILSMVLPVERLVDVIELLRKYKFEPKKIQFIFA 204


>gi|303249672|ref|ZP_07335877.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253812|ref|ZP_07339946.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307246835|ref|ZP_07528901.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307248975|ref|ZP_07530984.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253591|ref|ZP_07535459.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307255819|ref|ZP_07537621.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258007|ref|ZP_07539760.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307260271|ref|ZP_07541979.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262400|ref|ZP_07544046.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302647335|gb|EFL77557.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651484|gb|EFL81635.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306852306|gb|EFM84545.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306854521|gb|EFM86715.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306858971|gb|EFM91016.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861282|gb|EFM93274.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306863554|gb|EFM95484.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865718|gb|EFM97598.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306867948|gb|EFM99778.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 236

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +     +  +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPY 174
            D         FD+IVSNPPY
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPY 117


>gi|115760355|ref|XP_780350.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115949727|ref|XP_001184504.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 292

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 89  SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145
           S+P+IE+  +  +RILDLG G G+  L   +  P    VG+D S +A+   K  A   G 
Sbjct: 95  SMPQIEEQMKSGIRILDLGCGRGSASLVFAESYPNSTVVGLDFSQEAINYGKERAKEKGL 154

Query: 146 -----VSERFDTLQSDWFSSVEGLF--DVI 168
                V E    +  DW ++++ ++  DVI
Sbjct: 155 TNVEFVCEDAACISEDWNNTIDYIYTNDVI 184


>gi|320451402|ref|YP_004203498.1| menaquinone biosynthesis methyltransferase UbiE [Thermus
           scotoductus SA-01]
 gi|320151571|gb|ADW22949.1| menaquinone biosynthesis methyltransferase UbiE [Thermus
           scotoductus SA-01]
          Length = 235

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDL TGTG + L L +++P  + VG D +   L IA+  A   G++  F  L++D  S
Sbjct: 53  RILDLATGTGDLALMLKRKAPTAQVVGADFALPMLGIARRKARAQGLAVEF--LEADALS 110

Query: 160 --SVEGLFDVI 168
               +G F+ I
Sbjct: 111 LPFPQGSFEAI 121


>gi|291085014|ref|ZP_06351774.2| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220]
 gi|291071652|gb|EFE09761.1| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220]
          Length = 268

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+GTG+G + L L + +     +  V+++  A + A+ N   +    R +    D
Sbjct: 68  VKRILDIGTGSGLLALMLAQRTDDNVMIDAVELNVDAAQQAQENIAQSPWMHRVNVHTED 127

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W       FD+I+SNPPY E   V+C
Sbjct: 128 AQLWIPRQTVRFDLIISNPPYYEQG-VEC 155


>gi|262201923|ref|YP_003273131.1| methyltransferase small [Gordonia bronchialis DSM 43247]
 gi|262085270|gb|ACY21238.1| methyltransferase small [Gordonia bronchialis DSM 43247]
          Length = 514

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 16/141 (11%)

Query: 87  AFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           + SL R I +  V R LDLGTG G   L L  +    + V  D + +AL +A + A  NG
Sbjct: 161 SVSLARAIIREPVGRALDLGTGCGIQALHL--DGHCAEIVATDTNDRALRLAAATARING 218

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S  +D      F  VEG  FD+IVSNPP++       +G   RD+   I  D G+ G +
Sbjct: 219 MS--WDLRAGSLFEPVEGERFDLIVSNPPFV-------VGAGDRDY---IYRDSGMAGDA 266

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
              ++  G+  HLN  G   +
Sbjct: 267 LCESLIRGIPDHLNPGGTAQL 287


>gi|260494434|ref|ZP_05814564.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_33]
 gi|260197596|gb|EEW95113.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_33]
          Length = 225

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D+ L F L    + K+++ ++LD+GTG G + + L       + VG+DI  + ++ A   
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPILLSNNEFLSELVGIDIQKENIDRANKA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +  +F+ +    +      FDVI+SNPPY++
Sbjct: 88  LQLNKIEKNIQFECIDIREYRK-SNYFDVIISNPPYMD 124


>gi|158530275|gb|ABW71836.1| methyltransferase [Streptomyces refuineus subsp. thermotolerans]
          Length = 352

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +  R V R+LD+G G G + +      P   G+G+DI   A+ +A   A  +GVS+R
Sbjct: 165 LEAMRGRGVRRMLDIGCGGGQLIVDACLRDPSLTGIGLDIDADAIAVANDLARRHGVSDR 224

Query: 150 FDTLQSDWFS 159
            + + +D F+
Sbjct: 225 VEFVVADAFA 234


>gi|319638153|ref|ZP_07992916.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
 gi|317400426|gb|EFV81084.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
          Length = 371

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++    D+GTG+G +  A+L +      +  D + KA+  A +N    G+ +  +    D
Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACATANLERLGLDKAVNIQSID 250

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   E   D+IV NPP++ +       +E+  +DP  ++              +GVS H
Sbjct: 251 LFP--ETCADLIVCNPPWLPAKPTS--AIEIALYDPNNAM---------LTAFLNGVSHH 297

Query: 217 LNKDG 221
           LN +G
Sbjct: 298 LNPNG 302


>gi|259500696|ref|ZP_05743598.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
 gi|259168080|gb|EEW52575.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
          Length = 147

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+GA+ L  +    +   V VDI+  A EI K N +     ERF+  ++    
Sbjct: 9   RVLDLYAGSGALGLEAVSRG-YDSAVFVDINYAACEIIKKNILLTKEKERFEIFKNSDLR 67

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGL 185
           ++  L      FD++  +PPY +  I+  + +
Sbjct: 68  AISILASRNYHFDLVFLDPPYAKEKIIKVMKI 99


>gi|188582540|ref|YP_001925985.1| methyltransferase small [Methylobacterium populi BJ001]
 gi|179346038|gb|ACB81450.1| methyltransferase small [Methylobacterium populi BJ001]
          Length = 250

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG  TGAV LA  + S   + V V+       +A+ NA  NG++ER   + +D  + 
Sbjct: 44  LYDLGASTGAVGLAAARMSEACRVVLVERDPDLAALARENASANGLAERVAVIAADVLAP 103

Query: 161 ---------VEGLFDVIVSNPPYIE 176
                      G  D++++NPP+ E
Sbjct: 104 GAQRRAAGLQAGCADIVLTNPPFFE 128


>gi|146304657|ref|YP_001191973.1| hypothetical protein Msed_1909 [Metallosphaera sedula DSM 5348]
 gi|145702907|gb|ABP96049.1| hypothetical protein Msed_1909 [Metallosphaera sedula DSM 5348]
          Length = 165

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P PE  +L        + ++   D+V   DLG G G + +A +K     K VGVD+S 
Sbjct: 13  FVPTPEKVVL----KMLEVAKVGPEDIV--YDLGCGDGRIIIAAVKNFGAKKAVGVDLSD 66

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158
           + L+ A+ NA+ NGV ++ +  ++++ 
Sbjct: 67  ERLKEAEQNAIQNGVRDKIELRKNNFL 93


>gi|72175451|ref|XP_798637.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115949725|ref|XP_001184379.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 364

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 89  SLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145
           S+P+IE+R    +RILDLG G G   L   +  P    VG+D S +A+   K  A   G 
Sbjct: 167 SMPQIEERMKSGIRILDLGCGRGLASLVFAENYPNSTVVGLDFSEEAINYGKERAKEKGL 226

Query: 146 -----VSERFDTLQSDWFSSVEGL--FDVI 168
                V E    +  DW ++++ +  FDVI
Sbjct: 227 TNVEFVCEDAACIPDDWNNTIDYIYTFDVI 256


>gi|89093754|ref|ZP_01166700.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92]
 gi|89081884|gb|EAR61110.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92]
          Length = 398

 Score = 43.1 bits (100), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 35/152 (23%)

Query: 100 RILDLGT---GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+LDL +   G GA  LA    +   + + VD S  ALE+A  NA  N   +RF+    D
Sbjct: 223 RVLDLFSYVGGWGAQALA----AGASQAICVDASHFALEVAAENARINNAEDRFEGFHGD 278

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F   + L      FDV+V +PP       D     VR            +G   Y  + 
Sbjct: 279 AFDICKSLIADKEKFDVVVLDPPAFIQKKKD-----VR------------NGERAYSRMN 321

Query: 211 DGVSRHLNKDGL-----CSVEIGYNQKVDVVR 237
           +   R L KDG+     CS+ +   + VD++R
Sbjct: 322 NFAMRLLKKDGILVSASCSMHLQRERLVDIIR 353


>gi|260588968|ref|ZP_05854881.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM
           20583]
 gi|331083310|ref|ZP_08332423.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540747|gb|EEX21316.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM
           20583]
 gi|330404391|gb|EGG83936.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 249

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+LD+GTGTG V + L    P  KG    G++I  ++ E A+ +   N + +       D
Sbjct: 47  RVLDMGTGTGIVPILLKARYP--KGEHFTGLEIQEESAERARRSVAYNHLEQDITITTGD 104

Query: 157 WFSSVE----GLFDVIVSNPPYI 175
              S        FDV+ +NPPY+
Sbjct: 105 IKESASIYGGAFFDVVTTNPPYM 127


>gi|116326897|ref|YP_796617.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116329872|ref|YP_799590.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116119641|gb|ABJ77684.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116123561|gb|ABJ74832.1| tRNA (uracil-5-)-methyltransferase [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 417

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-VSERFDT--LQSD 156
           RIL+L  G+G + +AL  +S   K +G + S  +++ AK NA  NG  S  F T  L+++
Sbjct: 274 RILELYCGSGLIAIAL--QSKTKKWIGYEFSLNSVKQAKKNAQRNGFYSCDFKTLNLETN 331

Query: 157 WFSSVEGLFDVI-VSNPP 173
           W  S E L+    + NPP
Sbjct: 332 WIDSEEALYSSFWIMNPP 349


>gi|269123368|ref|YP_003305945.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
 gi|268314694|gb|ACZ01068.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
          Length = 237

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF----D 151
           R   ++L++G+G G + + +L++    +  GV+I+  A  I+  N   N +   F    D
Sbjct: 37  RKSKKLLEIGSGFGIISM-ILRKRTLAEITGVEINYDAYNISLENLKNNNIDNIFFINED 95

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
            L    F S E  +D+IVSNPPY
Sbjct: 96  ILNYRKFLS-EQTYDIIVSNPPY 117


>gi|197286343|ref|YP_002152215.1| 16S ribosomal RNA m2G1207 methyltransferase [Proteus mirabilis
           HI4320]
 gi|226712960|sp|B4EWW4|RSMC_PROMH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194683830|emb|CAR44934.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           HI4320]
          Length = 337

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+  G G +   L K++P  K    D++  A+  + +    N +  R   + S+ +S+
Sbjct: 200 LLDMACGCGVIATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 257

Query: 161 VEGLFDVIVSNPPY 174
           VE  +D IVSNPP+
Sbjct: 258 VEETYDWIVSNPPF 271


>gi|254828716|ref|ZP_05233403.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258601121|gb|EEW14446.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 201

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N  +       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|317049188|ref|YP_004116836.1| methyltransferase small [Pantoea sp. At-9b]
 gi|316950805|gb|ADU70280.1| methyltransferase small [Pantoea sp. At-9b]
          Length = 249

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R+LD+G+G+G + L + + +     +  V++   A + A+ N   +  + R    Q+D
Sbjct: 49  VRRVLDIGSGSGLIALMIAQRTADEVQIDAVELDADAAQQAQENVQASPWAARVTLHQAD 108

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W  + E  + +IVSNPPY
Sbjct: 109 IAQWADACEQRYSLIVSNPPY 129


>gi|261365025|ref|ZP_05977908.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
 gi|288566614|gb|EFC88174.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
          Length = 372

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G +  A+L +    + +  D + KA+  A +N    G+ ++      D F   
Sbjct: 197 FDIGTGSGVIA-AILAKRGISEIIATDTNPKAITCATANLARLGLDKQVVVQAVDLFP-- 253

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++              +GV +HLN  G
Sbjct: 254 EGCADLIVCNPPWLPAKPTSA--VETALYDPDNAM---------LTAFLNGVRQHLNPQG 302


>gi|220907787|ref|YP_002483098.1| type 12 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219864398|gb|ACL44737.1| Methyltransferase type 12 [Cyanothece sp. PCC 7425]
          Length = 240

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR E  L    A+A  LP     +   IL+LG GTG + L +L+  P  K V VD S + 
Sbjct: 27  PRYEEML---EAIAHCLPS----ETENILELGCGTGELSLKVLQRCPGAKLVAVDYSPRM 79

Query: 134 LEIAKSNAVTNGVSERFDTLQSD 156
           L  A++     G+ ER   +++D
Sbjct: 80  LAYAQTKLTAAGLGERVTWIEAD 102


>gi|187777347|ref|ZP_02993820.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC
           15579]
 gi|187774275|gb|EDU38077.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC
           15579]
          Length = 246

 Score = 43.1 bits (100), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + PRI+  D   ++DL TGTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPRIKNGD--EVVDLCTGTGIIPFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174
             N + E+   ++ D         +E   DV+  NPPY
Sbjct: 90  KYNNLQEKVKFIEGDLKDIKLLKDIEKA-DVVTVNPPY 126


>gi|323699176|ref|ZP_08111088.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfovibrio sp. ND132]
 gi|323459108|gb|EGB14973.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfovibrio desulfuricans ND132]
          Length = 291

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 12/104 (11%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RI GW DF N  L+   D +        LV +A      R E   +V  LDL  GT  V 
Sbjct: 28  RIAGWYDFLNHALSGGQDIYW----RYRLVRAA------RPEPGGMV--LDLAAGTMDVS 75

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           + LL++ P  K   +D +   LE  K+  + NG  ER   +Q+D
Sbjct: 76  VELLRQYPDCKVAALDFTLPMLENGKAKKLKNGREERIFPVQAD 119


>gi|308178263|ref|YP_003917669.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307745726|emb|CBT76698.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 529

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 13/100 (13%)

Query: 87  AFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           + +L +I  R+ V R LDLGTG G     LL  +        D+S +AL   + N + N 
Sbjct: 158 SLTLAQITIREKVERALDLGTGCGIQLFHLLAHAQHV--TATDVSARALGFTRFNLLLNA 215

Query: 146 ---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
                    +  R   LQ   F  V G  F++I SNPP++
Sbjct: 216 QTLNLDPKNLESRVTLLQGSLFEPVAGSTFNLIASNPPFV 255


>gi|33595778|ref|NP_883421.1| hypothetical protein BPP1102 [Bordetella parapertussis 12822]
 gi|33565857|emb|CAE36403.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 372

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +   L +          D+  +AL  A  N    G+  R   LQ+D F    
Sbjct: 200 DIGTGTGVLAAVLARRG--LDVTATDLDPRALACAADNLQRLGLGGRVRLLQADLFPP-- 255

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  D++V NPP++ +     +   + D D R+ L G + GL+           HLN  G
Sbjct: 256 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTGFLAGLAA----------HLNPGG 303


>gi|315127596|ref|YP_004069599.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913]
 gi|315016110|gb|ADT69448.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913]
          Length = 232

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDW 157
           +LD+GTGTG + L   + +P  K   V++   A + A  N   +    +S     +Q   
Sbjct: 39  LLDIGTGTGLLALMCKQRAPHLKVSAVEVDETAYQQALQNCQQSPWRDISIYHQPIQQ-- 96

Query: 158 FSSVEGLFDVIVSNPPYI 175
           F +V GLFD +++NPPY 
Sbjct: 97  FEAV-GLFDCVIANPPYF 113


>gi|187775821|ref|ZP_02992727.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196]
 gi|208807959|ref|ZP_03250296.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206]
 gi|187770611|gb|EDU34455.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196]
 gi|208727760|gb|EDZ77361.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206]
 gi|326340381|gb|EGD64185.1| putative methyltransferase [Escherichia coli O157:H7 str. 1125]
          Length = 257

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER +   +D
Sbjct: 57  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 116

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY E   V+C
Sbjct: 117 IQQWVTQQTARFDLIISNPPYYEQG-VEC 144


>gi|149184033|ref|ZP_01862393.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1]
 gi|148848261|gb|EDL62551.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1]
          Length = 201

 Score = 42.7 bits (99), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G V L++ K  P      VD++ +A+ +A+ NA  NG+S      +S  F +
Sbjct: 62  LLDVGCGYGPVGLSMAKAFPERTVHMVDVNVRAIGLAEENARANGIS-NASIYESSCFKN 120

Query: 161 V-EGLFDVIVSNPP 173
           V E  F  +++NPP
Sbjct: 121 VSEKNFSAVLTNPP 134


>gi|268593258|ref|ZP_06127479.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131]
 gi|291311154|gb|EFE51607.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131]
          Length = 244

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156
           V  +LD+G+G+G + L L + +       V++   A   A+ N + +  ++R   +  D 
Sbjct: 45  VQSVLDIGSGSGLIALMLAQRNAMLCVDAVELDNDAAVQAQENFIESPWADRLHVINQDI 104

Query: 157 ----WFSSVEGLFDVIVSNPPYIESVIV 180
                 SSV+  +D+IVSNPPY E  + 
Sbjct: 105 VSYSQLSSVQ--YDLIVSNPPYFEPAVA 130


>gi|212546153|ref|XP_002153230.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
 gi|210064750|gb|EEA18845.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
          Length = 362

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 37/183 (20%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEK-RDVVRILD 103
           + + +  ILG + F ++ +        PR ETE     A  +    P  +  R  +RILD
Sbjct: 79  RGKPLQYILGDQPFGDLEILCQRGVLIPRAETESYTSHARDIIMKGPYAKDFRKSLRILD 138

Query: 104 LGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTN--------------- 144
           L +G+G + L L             VG+D+  +A+++++ N + N               
Sbjct: 139 LCSGSGCISLLLHSLLASDIKDLTIVGIDVDPQAIKLSQKNKLHNIRRGLLSSRAENEVY 198

Query: 145 ------------GVSERFDTLQSDWFSS-VEGLFDVIVSNPPYI--ESVIVDCLGLEVRD 189
                       G S    TLQS + +S     +DV++SNPPYI   ++I       VR 
Sbjct: 199 FIKFDILHSIQSGNSSLMGTLQSHFHASNTNNTWDVLISNPPYISPSNLINGTTTRSVRR 258

Query: 190 FDP 192
           ++P
Sbjct: 259 YEP 261


>gi|332654231|ref|ZP_08419975.1| putative methyltransferase [Ruminococcaceae bacterium D16]
 gi|332517317|gb|EGJ46922.1| putative methyltransferase [Ruminococcaceae bacterium D16]
          Length = 208

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 3/109 (2%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           L     E RPE   L    LA    R    R   R+ DLGTG+G + L L       +  
Sbjct: 7   LGPYQLEQRPEVFPLGSDTLALG--RFATVRKGWRVCDLGTGSGVLLLLLAARESQLELF 64

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G+D    A  +A+ N   N +  +  T          G FD++VSNPPY
Sbjct: 65  GLDQDPAAAALAQDNLRHNDLEGQIWTGSWSQTPFPPGSFDLVVSNPPY 113


>gi|227498083|ref|ZP_03928256.1| methylase [Actinomyces urogenitalis DSM 15434]
 gi|226832521|gb|EEH64904.1| methylase [Actinomyces urogenitalis DSM 15434]
          Length = 220

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVV 99
           + R    E +  + G   F  + L      F  RPETE++  +A+  +  R+ +R     
Sbjct: 62  VARRTAREPLQHLTGRMWFRGLELVARPGVFIVRPETEVVAGAAIE-AAGRVAERYGRAP 120

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQS 155
            ++DL TG+GA+  A+  E P  +  GV+++  A+  A+ N            + D   +
Sbjct: 121 VVVDLCTGSGAIAAAVAAEVPTARVTGVELADAAVAAARENCERVVPGRVRVVQADATAA 180

Query: 156 DWFSSVEGLFDVIVSNPPYIES 177
              + ++G  DV+VSNPPY+ +
Sbjct: 181 ATLAEMDGSVDVVVSNPPYVPA 202


>gi|170077427|ref|YP_001734065.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
 gi|169885096|gb|ACA98809.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
          Length = 222

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LDLGTGT  + + L ++ P ++  G D++   L + + N V  G++ + + + +
Sbjct: 43  QETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYA 102

Query: 156 DW--FSSVEGLFDVIVSN 171
           D       +  FDVI+SN
Sbjct: 103 DAKNLPWPDQSFDVIISN 120


>gi|268574134|ref|XP_002642044.1| Hypothetical protein CBG17981 [Caenorhabditis briggsae]
          Length = 259

 Score = 42.7 bits (99), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             VG+DI   AL+I   N  T  + E  D LQ D
Sbjct: 82  DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 141

Query: 157 WFSS----VEGLFDVIVSNPPY 174
                    +G FDV V NPP+
Sbjct: 142 VLDPEAKLPQGEFDVAVINPPF 163


>gi|282862452|ref|ZP_06271514.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
 gi|282562791|gb|EFB68331.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
          Length = 508

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             R+LDLG G G +  ALLK++ F + VGVD+S +AL +A      + + ER
Sbjct: 299 AARVLDLGCGQGQLVQALLKDARFTEIVGVDVSMRALTVAARRLKLDRMGER 350


>gi|227894595|ref|ZP_04012400.1| methyltransferase [Lactobacillus ultunensis DSM 16047]
 gi|227863586|gb|EEJ71007.1| methyltransferase [Lactobacillus ultunensis DSM 16047]
          Length = 214

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +  Q +F T+   +  +H   + +    D  +++ T  +  F     +++ VD      +
Sbjct: 12  EKNQMYFATDPNAKHDEHVVDYHV----DNVDLKFTTDAGVF-----SKMRVDYGSGVLI 62

Query: 91  PRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             +++ D  +  ILD+GTG G + L   K  P  K   VD++ + L++AK NA  N + +
Sbjct: 63  KTMKEVDFPKNNILDVGTGYGPIGLFAAKFWPDKKVDMVDVNERGLKLAKQNAKVNHI-K 121

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPP 173
             +   SD ++ V+    F +I++NPP
Sbjct: 122 NVNIYSSDCYAQVDNDKKFGLILTNPP 148


>gi|126659753|ref|ZP_01730881.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110]
 gi|126619001|gb|EAZ89742.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110]
          Length = 241

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +L++D+ +A  +P     D   +LDLG GTG + L LLK  P  K V +D S + ++
Sbjct: 28  PHYDLMLDTLVA-CVPI----DTRHVLDLGCGTGELSLKLLKHCPDAKIVALDYSPRMIK 82

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +A+S       S+R   +++D+ +   G
Sbjct: 83  MAQSKLEKTPFSDRITFIEADFGAWANG 110


>gi|1171043|sp|P43423|MTC1_BACST RecName: Full=Modification methylase BseCI; Short=M.BseCI; AltName:
           Full=Adenine-specific methyltransferase BseCI
 gi|619639|emb|CAA56041.1| methyltransferase [Geobacillus stearothermophilus]
          Length = 579

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 25/150 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSER 149
           EK  V+R+LD   G G + LA+ K +       + +GVD    A+ IA      +G  + 
Sbjct: 40  EKNRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDFDIDAINIANERLSRSG-HKN 98

Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195
           F  +  D+   V EG    LF        D+I++NPPY+ + I   LG E  +    + +
Sbjct: 99  FRLINKDFLEMVSEGDNYDLFNIEELEPVDIIIANPPYVRTQI---LGAEKAQKLREKFN 155

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L G +D    Y+     +++ L  +G+  V
Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIIGV 182


>gi|148257404|ref|YP_001241989.1| 50S ribosomal protein L11P methyltransferase [Bradyrhizobium sp.
           BTAi1]
 gi|146409577|gb|ABQ38083.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Bradyrhizobium sp. BTAi1]
          Length = 298

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       R+LDLGTGTG + +A  K       +  DI   ++ +A+ 
Sbjct: 146 LLLDHILKSRVPR-------RVLDLGTGTGVLAIAAAKAQ-HRSVLASDIDPPSVAVARE 197

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
           NA  NGV      +++  F++ +    G FD++++N
Sbjct: 198 NAWLNGVGPLVRVIRATGFAAEDFAKAGPFDLVLAN 233


>gi|188533128|ref|YP_001906925.1| Putative enzyme [Erwinia tasmaniensis Et1/99]
 gi|188028170|emb|CAO96028.1| Putative enzyme [Erwinia tasmaniensis Et1/99]
          Length = 277

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R+LD+G+G+G + L L + +     +  V++  +A   A+ N   +  + R    Q+D
Sbjct: 77  VKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRVHVQQAD 136

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W    E  + +IVSNPPY
Sbjct: 137 VVEWAQRCEHSYSLIVSNPPY 157


>gi|84515722|ref|ZP_01003083.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53]
 gi|84510164|gb|EAQ06620.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53]
          Length = 255

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +PR      VD  L  +   I  R    +L+LG G G   L L +  P     GV++  
Sbjct: 22  LQPRHGYRAGVDPVLLAA--SIAARAGQSVLELGCGVGTAALCLGRRVPGLALTGVEVQT 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
           +  ++A+ NA  N +    + + +D  +   GL    FD ++ NPPY +
Sbjct: 80  EYADLARRNAAANDLP--LEVITADLRTLPAGLRQRRFDHVIMNPPYFD 126


>gi|319788722|ref|YP_004090037.1| methyltransferase [Ruminococcus albus 7]
 gi|315450589|gb|ADU24151.1| methyltransferase [Ruminococcus albus 7]
          Length = 182

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 15/122 (12%)

Query: 70  DTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGV 125
           DT + RP T+++   V SA+ F +P        ++LDL  G+G + + AL +E+     V
Sbjct: 17  DTLDTRPTTDMVKEAVFSAIQFDVPG------SQVLDLFAGSGQMGIEALSREASHC--V 68

Query: 126 GVDISCKALEIAKSNAVT---NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            VD +  A+++ K N      N  S   +    D+    +G FD+++ +PPY + +I   
Sbjct: 69  FVDNNPAAVQVIKENISDCKFNTESRVLNMDSLDYIKVAKGQFDIVLLDPPYGKGIIEKV 128

Query: 183 LG 184
           LG
Sbjct: 129 LG 130


>gi|161529283|ref|YP_001583109.1| RNA methylase [Nitrosopumilus maritimus SCM1]
 gi|160340584|gb|ABX13671.1| putative RNA methylase [Nitrosopumilus maritimus SCM1]
          Length = 315

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 22/185 (11%)

Query: 2   QALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + L+++ +F+CR+  LSS+Q  I + ++ + D    F +NA V+ L++  I   L + + 
Sbjct: 79  EILKNAKTFVCRIINLSSNQFDIPELENSMGDMISKF-SNAKVK-LENPDITVYLIFTNK 136

Query: 61  YNVRLTLSSDTFEP-RPETELLVDSALAFSLPR-------IEKRDVVRILDLGTGTGAVC 112
            N     S  T E  RP+  +     L + L R       ++K + V   D   GTG   
Sbjct: 137 ENF-FGFSKITKEKKRPKKAISQPHELDWKLTRAMINLVGLKKGETV--CDPFCGTGTTL 193

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIV 169
           L    ES    G+G+D   K +EI K N   NG   R   + SD F  ++ +   FD IV
Sbjct: 194 LEA--ESMGIHGIGLDFDEKMVEITKKNLKENGYKSR--VIHSD-FQEIKNMADEFDGIV 248

Query: 170 SNPPY 174
           ++ PY
Sbjct: 249 TDFPY 253


>gi|126465679|ref|YP_001040788.1| methyltransferase small [Staphylothermus marinus F1]
 gi|126014502|gb|ABN69880.1| methyltransferase small [Staphylothermus marinus F1]
          Length = 186

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 9/105 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +EP  +T LL+++        I   D     +DLG GTG V L LL ++   K + +DI+
Sbjct: 2   YEPSDDTWLLLET--------IRDNDYFNNCVDLGCGTGVVGLYLLSKNICSKTLFIDIN 53

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
             AL     N   N    +      D  S +E  F+++V+NPPY+
Sbjct: 54  PVALLNTVYNLKLNNYQHKGLVASIDNDSILENYFELVVANPPYL 98


>gi|154175164|ref|YP_001408352.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92]
 gi|112803155|gb|EAU00499.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92]
          Length = 237

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LD+G G G + L L ++   FKG  +   D+    LEI++ NA  NG+  +        
Sbjct: 35  VLDVGCGCGVLGLLLKRD---FKGASLSLLDVQDINLEISRQNARANGLEAKILNADFAG 91

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISLDGGIDG 202
           F S E  FD+IVSNPP+    +       L++  +   +SL G I G
Sbjct: 92  FKS-ETKFDLIVSNPPFYHDGVKQSAVEHLKLSRYASALSLCGFIAG 137


>gi|229512922|ref|ZP_04402389.1| predicted O-methyltransferase [Vibrio cholerae TMA 21]
 gi|229350171|gb|EEO15124.1| predicted O-methyltransferase [Vibrio cholerae TMA 21]
          Length = 240

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
              +   F  I+ NPPY  S
Sbjct: 106 --QLSKRFAAIICNPPYFNS 123


>gi|225468789|ref|XP_002262890.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 320

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 12/139 (8%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
           S+ ++  +RI   R     R++   + +EP  ++  LVD+ LA     +E    +  +++
Sbjct: 60  SVSYKMTYRIAQIR-----RVSSHPEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEV 113

Query: 105 GTGTGAV----CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDT-LQSDWF 158
           G G+G V     L L +E+     +  DI+  A+ + +     +GV +E  +T + S   
Sbjct: 114 GCGSGYVITSLALILGQEAQGIHYLATDINPHAVRVTQETLEAHGVHAELINTDIASGLE 173

Query: 159 SSVEGLFDVIVSNPPYIES 177
            S+ G+ DV+V NPPY+ +
Sbjct: 174 KSLAGMVDVMVVNPPYVPT 192


>gi|218710862|ref|YP_002418483.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32]
 gi|254783323|sp|B7VM52|PRMA_VIBSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|218323881|emb|CAV20242.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K VG+DI  +AL  +K NA  NGV+E+ +          EGL  DV+V+N
Sbjct: 182 AAKVVGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231


>gi|119718090|ref|YP_925055.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119538751|gb|ABL83368.1| 16S rRNA m(2)G 1207 methyltransferase [Nocardioides sp. JS614]
          Length = 205

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A A      E     R LDLG G G + LA+    P      +D++ +A+ +A  NA
Sbjct: 43  LDHATAVLFRETEPPVQGRFLDLGCGYGVIGLAIAAAVPLASITAIDVNDRAIALANENA 102

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
               V  RF   + +   + E ++D I SNPP
Sbjct: 103 RAMRVDGRFVACRPEQVPTNE-VYDEIWSNPP 133


>gi|330718871|ref|ZP_08313471.1| O-methyltransferase [Leuconostoc fallax KCTC 3537]
          Length = 254

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 11/93 (11%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVTNG 145
           F+ P+ + R +   +DLG+GTGAV L     +P   G+   V+I  +  E+++ + VTN 
Sbjct: 41  FAQPKGKGRGIT--VDLGSGTGAVGLLY---APKITGIVKLVEIQPELAEMSQRSIVTNH 95

Query: 146 VSERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174
           + ER   +  D    F  ++ G  + ++SNPPY
Sbjct: 96  LQERVSVVNRDMNTIFDDIKPGSVETVLSNPPY 128


>gi|269978122|ref|ZP_06185072.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
 gi|269933631|gb|EEZ90215.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
          Length = 272

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +P++ +  V   +D+G G G + L + ++ P  + V VD++ +AL++   NA  NG+   
Sbjct: 122 VPKLPEGGV--FVDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNL 179

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173
               ++   + + +G  DVI SNPP
Sbjct: 180 EVLAETAALAQLADGSVDVIWSNPP 204


>gi|209762802|gb|ACI79713.1| putative enzyme [Escherichia coli]
 gi|209762806|gb|ACI79715.1| putative enzyme [Escherichia coli]
          Length = 285

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY E   V+C
Sbjct: 145 IQQWVTQQTARFDLIISNPPYYEQG-VEC 172


>gi|227500739|ref|ZP_03930788.1| methylase of polypeptide chain release factor family protein
           [Anaerococcus tetradius ATCC 35098]
 gi|227217146|gb|EEI82499.1| methylase of polypeptide chain release factor family protein
           [Anaerococcus tetradius ATCC 35098]
          Length = 455

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 13/123 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL +GTG   +   K +   K + ++I+ KA+ I + N   N + +  +  + + ++ 
Sbjct: 152 VLDLCSGTGIQGMIAAKSAK--KVISIEINPKAVNICRLNIFLNKLDKIIELRKGNLYNC 209

Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +     FD I +NPP+I            +  +  I  DGG DG    + I +G++ +L 
Sbjct: 210 LNSNEKFDYIYANPPFIPMA---------KYIEYPICGDGGEDGTVILKKITEGLNEYLK 260

Query: 219 KDG 221
            +G
Sbjct: 261 DNG 263


>gi|145495362|ref|XP_001433674.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400793|emb|CAK66277.1| unnamed protein product [Paramecium tetraurelia]
          Length = 256

 Score = 42.7 bits (99), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I K  + +I D+GTG   V + L      +KG+GVD S +A+  A+S A +N +   F  
Sbjct: 92  ISKFPITKIYDVGTGFSGVLIFLAYRLYGWKGIGVDTSEQAINHARSIAQSNHIECEFKV 151

Query: 153 LQSDWFSSVE-GLFDVIVSNPPY 174
              D F  +E G+  V V NPP+
Sbjct: 152 --GDLFQFLEDGM--VTVCNPPF 170


>gi|295688726|ref|YP_003592419.1| putative RNA methylase [Caulobacter segnis ATCC 21756]
 gi|295430629|gb|ADG09801.1| putative RNA methylase [Caulobacter segnis ATCC 21756]
          Length = 219

 Score = 42.7 bits (99), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+ G G G   LA     P     GV+    A  +A  NA  N +SER   L+ D  +
Sbjct: 17  RVLEPGCGVGGALLAAATRRPGVIFQGVERDSLAASLATENAALNDLSERVAILEGDVEA 76

Query: 160 SVEGL----FDVIVSNPPYIE 176
               L    FD +++NPP+ +
Sbjct: 77  GFRALGLPAFDAVMTNPPFFD 97


>gi|227875232|ref|ZP_03993374.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35243]
 gi|227844137|gb|EEJ54304.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35243]
          Length = 282

 Score = 42.7 bits (99), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +P++ +  V   +D+G G G + L + ++ P  + V VD++ +AL++   NA  NG+   
Sbjct: 132 VPKLPEGGV--FVDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNL 189

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173
               ++   + + +G  DVI SNPP
Sbjct: 190 EVLAETAALAQLADGSVDVIWSNPP 214


>gi|320457825|dbj|BAJ68446.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 187

 Score = 42.7 bits (99), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 14/86 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153
           LDLG G G + L L  ESP      VD++ +AL++  +NA  NG        V E    L
Sbjct: 32  LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 91

Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173
               Q  +  +V G   FDVI SNPP
Sbjct: 92  PAENQPAFCETVPGDLTFDVIWSNPP 117


>gi|320539410|ref|ZP_08039079.1| methylase for 50S ribosomal subunit protein L11 [Serratia
           symbiotica str. Tucson]
 gi|320030535|gb|EFW12545.1| methylase for 50S ribosomal subunit protein L11 [Serratia
           symbiotica str. Tucson]
          Length = 293

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER    L +D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AERAIGIDIDPQAIQASRDNAQRNGVSERLALYLPND--Q 218

Query: 160 SVEGLFDVIVSN 171
             E L DV+V+N
Sbjct: 219 PAELLADVVVAN 230


>gi|320006967|gb|ADW01817.1| UbiE/COQ5 methyltransferase [Streptomyces flavogriseus ATCC 33331]
          Length = 244

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+ SA    LPR  +   +R+LDLG GTGA   ALL+ +P+ +   VD S   LE A++ 
Sbjct: 34  LLRSAHRLRLPRGGR--GLRLLDLGCGTGASTRALLRAAPYARITAVDASAGMLERARAK 91


>gi|144899240|emb|CAM76104.1| Ribosomal L11 methyltransferase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 299

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%)

Query: 74  PRPETELLVDSALAFS----------LPRIEK----RDVVRILDLGTGTGAVCLALLKES 119
           P    ELLVD+  AF           L  ++K    R  +  LDLG G+G + + + K  
Sbjct: 122 PTGRIELLVDAGTAFGSGEHATTRGCLTMLDKLGKRRRFLHPLDLGAGSGILGIGMAKMW 181

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGL-FDVIVSN 171
                +  DI   A+++A +NA  NGV  RF ++ SD + +    +G  FD+IV+N
Sbjct: 182 AV-DVLATDIDPSAVKVAANNARMNGVGSRFTSVVSDGYRNRALKQGQPFDIIVAN 236


>gi|91776075|ref|YP_545831.1| methyltransferase small [Methylobacillus flagellatus KT]
 gi|91710062|gb|ABE49990.1| methyltransferase small [Methylobacillus flagellatus KT]
          Length = 368

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D +   D+GTG+G V  A+L +    K +  D   +AL  A+ N    G+  + + L  +
Sbjct: 189 DKMLAFDIGTGSG-VLAAVLAKRGVQKVIATDQDARALACARENMQRLGLEAQVEVLSCN 247

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F    G   +IV NPP+I +       +E   +DP  ++  G  G         GVS H
Sbjct: 248 LFPP--GKAPLIVCNPPWIPAKA--NAPIEYAIYDPASTMLKGFLG---------GVSAH 294

Query: 217 LNKDG 221
           L   G
Sbjct: 295 LTPGG 299


>gi|33600304|ref|NP_887864.1| hypothetical protein BB1318 [Bordetella bronchiseptica RB50]
 gi|33567903|emb|CAE31816.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 372

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +   L +          D+  +AL  A  N    G+  R   LQ+D F    
Sbjct: 200 DIGTGTGVLAAVLARRG--LDVTATDLDPRALACAADNLQRLGLGGRVRLLQADLFPP-- 255

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  D++V NPP++ +     +   + D D R+ L G + GL+           HLN  G
Sbjct: 256 GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTGFLAGLAA----------HLNPGG 303


>gi|304412070|ref|ZP_07393680.1| Methyltransferase type 11 [Shewanella baltica OS183]
 gi|307305965|ref|ZP_07585711.1| Methyltransferase type 11 [Shewanella baltica BA175]
 gi|304349620|gb|EFM14028.1| Methyltransferase type 11 [Shewanella baltica OS183]
 gi|306911458|gb|EFN41884.1| Methyltransferase type 11 [Shewanella baltica BA175]
          Length = 243

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 60  FYN--VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           F+N   ++  S+   E   E + L D+     LP +  +   R+LDLG G G  C     
Sbjct: 11  FFNEYAKMPRSTGGLESAGEWQALRDN-----LPELRGK---RVLDLGCGYGWHC-QYAA 61

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           E      VG+DIS K LE A+     + V  R++    + F S  G FDV++S+
Sbjct: 62  EQGAAAVVGIDISAKMLEKARELTTADNV--RYENTAIEDFESPSGAFDVVLSS 113


>gi|302024399|ref|ZP_07249610.1| type I restriction-modification system, M subunit [Streptococcus
           suis 05HAS68]
 gi|330833400|ref|YP_004402225.1| type I restriction-modification system, M subunit [Streptococcus
           suis ST3]
 gi|329307623|gb|AEB82039.1| type I restriction-modification system, M subunit [Streptococcus
           suis ST3]
          Length = 529

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)

Query: 93  IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D    + D   G+G++ L +  E P     K  G +++     +A+ N + + VS 
Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVSY 280

Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174
                   DTL+SDW   V+ L       FD +V+NPPY
Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319


>gi|121716649|ref|XP_001275870.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL
           1]
 gi|119404027|gb|EAW14444.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL
           1]
          Length = 335

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG   L +  + P  + VG D+S      A  N V N      D  +SDW  
Sbjct: 100 RILDVGTGTGIWALEMADDFPDAEIVGTDLSPIQPSWAPPNCVFN-----VDDAESDWTF 154

Query: 160 SVEGLFDVIVS 170
           + E  FD I S
Sbjct: 155 TPEEAFDYIHS 165


>gi|15803102|ref|NP_289133.1| putative enzyme [Escherichia coli O157:H7 EDL933]
 gi|15832695|ref|NP_311468.1| hypothetical protein ECs3441 [Escherichia coli O157:H7 str. Sakai]
 gi|291283851|ref|YP_003500669.1| hypothetical protein G2583_3157 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12516996|gb|AAG57691.1|AE005488_2 putative enzyme [Escherichia coli O157:H7 str. EDL933]
 gi|13362912|dbj|BAB36864.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
 gi|209762798|gb|ACI79711.1| putative enzyme [Escherichia coli]
 gi|209762800|gb|ACI79712.1| putative enzyme [Escherichia coli]
 gi|209762804|gb|ACI79714.1| putative enzyme [Escherichia coli]
 gi|290763724|gb|ADD57685.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615]
          Length = 285

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY E   V+C
Sbjct: 145 IQQWVTQQTARFDLIISNPPYYEQG-VEC 172


>gi|319440181|ref|ZP_07989337.1| putative RNA methyltransferase [Corynebacterium variabile DSM
           44702]
          Length = 380

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%)

Query: 72  FEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           F P R E   LVD   A  LP ++      +L+LGTGTG V  A+L      +    D++
Sbjct: 163 FSPTRSEYVDLVDDVAAAFLPSLKA--GASVLELGTGTG-VLAAVLARRGAVRVTATDVN 219

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------------GLFDVIVSNPPYIESV 178
            +A+  A++N    GV ER + +++D + +V                D++V NPP++   
Sbjct: 220 PRAVACARANLDRLGVGERCEVVEADLWPAVSETTETTDAADAADAADIVVFNPPWLPGT 279

Query: 179 IVDCLGLEVRD 189
               L L + D
Sbjct: 280 PTSELELGIYD 290


>gi|293194295|ref|ZP_06609981.1| transferase [Actinomyces odontolyticus F0309]
 gi|292819742|gb|EFF78756.1| transferase [Actinomyces odontolyticus F0309]
          Length = 563

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 18/162 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+G G G   L L   +   + V  D+S +A  + + NA  N      D  +
Sbjct: 216 REQVDSALDVGCGCGIQALYLATHAD--RVVATDLSSRACALTQFNAALN--EAVIDVRE 271

Query: 155 SDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              F  VEG  FD+IV+NPP++   +SV      LE R        DGG+D  +  R + 
Sbjct: 272 GSLFEPVEGETFDLIVTNPPFVITPDSVRGASGLLEYR--------DGGMDRDNLIRAVL 323

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            G    +N+ G  ++++  N ++   R  +++  + V+++ D
Sbjct: 324 RGAPACMNEGG--TLQMLANWEIPADRNPDTQWSWRVDSWLD 363


>gi|254392232|ref|ZP_05007418.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|197705905|gb|EDY51717.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
          Length = 229

 Score = 42.7 bits (99), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 21/144 (14%)

Query: 102 LDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           L++G GTG  AV  AL   S       +DI+ KA+    +NA  +GVS+R   L SD ++
Sbjct: 65  LEVGCGTGVIAVTAAL---SGCTSVTALDINEKAIANTVANAERHGVSDRVRALHSDMYT 121

Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           ++     FD I  N P  Y+E        L    FDP      G  G + Y     G   
Sbjct: 122 ALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------GYRGQARYLA---GAHE 172

Query: 216 HLNKDG---LCSVEIGYNQKVDVV 236
           HL   G   L + ++G  +++D V
Sbjct: 173 HLADGGRLLLGTADLGDRERLDAV 196


>gi|325267815|ref|ZP_08134465.1| methyltransferase [Kingella denitrificans ATCC 33394]
 gi|324980696|gb|EGC16358.1| methyltransferase [Kingella denitrificans ATCC 33394]
          Length = 367

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 22/166 (13%)

Query: 57  WRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           W D     + +    F P R E   LV  A A S  R         +D+GTG+G +   L
Sbjct: 154 WMDALQANIHVPFGVFSPIRGEYVELVRQAAAQSQART-------AMDIGTGSGVLAAML 206

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K S        D + +A+  A  N    G+S R      D F++     D+IV NPP++
Sbjct: 207 AKHSAACI-TATDNNPRAVACATDNIARLGLSSRVRVQMQDLFANESA--DLIVCNPPWL 263

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            +       +E   +DP  ++   +  L H         RHLN  G
Sbjct: 264 PARPTS--AIETALYDPDHAM---LHALLH------NAGRHLNDGG 298


>gi|269964516|ref|ZP_06178756.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B]
 gi|269830753|gb|EEZ84972.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B]
          Length = 239

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+  +  +ILD+GTGTG + L   +     +   VDI   A+  A+ N   +  S+R   
Sbjct: 38  IQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWSDRVSV 97

Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177
             +D    +    F  I+ NPPY  S
Sbjct: 98  HHTDILHFTPTHPFQRIICNPPYFNS 123


>gi|239815338|ref|YP_002944248.1| TetR family transcriptional regulator [Variovorax paradoxus S110]
 gi|239801915|gb|ACS18982.1| transcriptional regulator, TetR family [Variovorax paradoxus S110]
          Length = 204

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR 188
           AL  A S      VSE FD  Q  W + VE      FD +  +P  + ++ V+ LGL + 
Sbjct: 70  ALYEAASKLALRAVSEAFDPAQ-PWHAQVERAITAYFDYLAQDPALLRTLFVEILGLGMP 128

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
               R  ++G I G      I +G + HL  +   +V  G N+ V
Sbjct: 129 GLAARRRVNGEIAGFIQ-AAINNGPAAHLTSEMAMTVVGGINELV 172


>gi|327438261|dbj|BAK14626.1| 16S RNA G1207 methylase RsmC [Solibacillus silvestris StLB046]
          Length = 200

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 16/121 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSAL---------AFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           + TL  +TF    +T +   S +          F +P+I+      +LD+G G G + L+
Sbjct: 20  KFTLLGNTFTFETDTGVFSKSEVDFGSRVLIDVFEMPKIDGV----LLDVGCGYGPIGLS 75

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV--IVSNP 172
           + K +P  +   +DI+ +A+ +++ NA  NGV +     +SD  ++VE    V  +++NP
Sbjct: 76  IAKNNPDREIYMMDINSRAVSLSQKNAQLNGV-QNVRIFESDGLAAVEPGTKVAAVLTNP 134

Query: 173 P 173
           P
Sbjct: 135 P 135


>gi|326316088|ref|YP_004233760.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372924|gb|ADX45193.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 388

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 14/119 (11%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ N     V    D LQ+D F    
Sbjct: 215 DIGTGTG-VLAAVLARRGVRRVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP-- 271

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G   ++V NPP++ +     +   V D D R+            R    G++ HL  DG
Sbjct: 272 GRAPLVVCNPPWVPARAAAPVERAVYDEDSRM-----------LRGFLGGLAGHLEPDG 319


>gi|260433423|ref|ZP_05787394.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417251|gb|EEX10510.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 402

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 27/150 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD+ +  G   LA+L        + VD S  AL +A+  AV +G  +RF+T Q D F
Sbjct: 230 AHVLDVFSHVGGFGLAMLAGG-ADHALSVDGSAAALTLAEQGAVASGFGDRFETRQGDAF 288

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIAD 211
             +  L      FDV++ +PP                F P + +LD G+        +A 
Sbjct: 289 DVLTQLGEAGAQFDVVICDPPA---------------FAPSKQALDAGLRAYERIARLAA 333

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            + +     GLCS     +   D+ R  E+
Sbjct: 334 PLVKPGGYLGLCSC----SHAADLARFREA 359


>gi|229525314|ref|ZP_04414719.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426]
 gi|229338895|gb|EEO03912.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426]
          Length = 240

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECKHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSER--FAAIICNPPYFNS 123


>gi|224223723|gb|ACN39738.1| SibO [Streptosporangium sibiricum]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 7/104 (6%)

Query: 98  VVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V  +L++G G G A  L  L   P  +   +DI+  A+  A+ NA  +GV++R   L SD
Sbjct: 59  VHSMLEMGCGCGVAAVLGALAGVP--RVTALDINPAAVRTAQLNAERHGVADRVTALVSD 116

Query: 157 WFSSV--EGLFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISL 196
            FS+V  +  +D+I  N P+I+      L   L    FDP  ++
Sbjct: 117 LFSAVPEDTAYDLIFWNSPFIQVPADHALDSDLAYHFFDPGYTM 160


>gi|332362852|gb|EGJ40645.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK49]
          Length = 182

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +        V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGQ 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           S+E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 SLEILTGAFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|221640206|ref|YP_002526468.1| methyltransferase small [Rhodobacter sphaeroides KD131]
 gi|221160987|gb|ACM01967.1| Methyltransferase small [Rhodobacter sphaeroides KD131]
          Length = 253

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G+++      +A+ NA  NGV+   + ++ D  S+
Sbjct: 47  VLELGCGAGVASLCLAARVPGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGD-LSA 103

Query: 161 VEGL----FDVIVSNPPYIES 177
           +  +    FD +++NPPY  +
Sbjct: 104 MPAVLRRSFDHVIANPPYYPA 124


>gi|154508469|ref|ZP_02044111.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798103|gb|EDN80523.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC
           17982]
          Length = 563

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 18/162 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+G G G   L L   +   + V  D+S +A  + + NA  N      D  +
Sbjct: 216 REQVDSALDVGCGCGIQALYLATHAD--RVVATDLSSRACALTQFNAALN--EAVIDVRE 271

Query: 155 SDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              F  VEG  FD+IV+NPP++   +SV      LE R        DGG+D  +  R + 
Sbjct: 272 GSLFEPVEGETFDLIVTNPPFVITPDSVRGAAGLLEYR--------DGGMDRDNLIRAVL 323

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            G    +N  G  ++++  N ++   R  +++  + V+++ D
Sbjct: 324 RGAPACMNAGG--TLQMLANWEIPADRNPDTQWSWRVDSWLD 363


>gi|145640384|ref|ZP_01795968.1| predicted O-methyltransferase [Haemophilus influenzae R3021]
 gi|145274970|gb|EDK14832.1| predicted O-methyltransferase [Haemophilus influenzae 22.4-21]
          Length = 232

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R   +Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQDNINNSVWKNRIQLIQTDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +    E  FD+IV+NPPY E  I 
Sbjct: 99  FLQPTEQTFDLIVANPPYFEQGIA 122


>gi|146323517|ref|XP_754131.2| TAM domain methyltransferase [Aspergillus fumigatus Af293]
 gi|129558251|gb|EAL92093.2| TAM domain methyltransferase, putative [Aspergillus fumigatus
           Af293]
          Length = 336

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 5/62 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           RDV RILDLGTGTG   + +  E P  K +G D+S       +   V   +S   D  +S
Sbjct: 100 RDVSRILDLGTGTGIWAIEMADEFPTAKVIGNDLSP-----IQPTWVPPNLSFEVDDFES 154

Query: 156 DW 157
           DW
Sbjct: 155 DW 156


>gi|309357303|emb|CAP35511.2| hypothetical protein CBG_17981 [Caenorhabditis briggsae AF16]
          Length = 224

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             VG+DI   AL+I   N  T  + E  D LQ D
Sbjct: 47  DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 106

Query: 157 WFSS----VEGLFDVIVSNPPY 174
                    +G FDV V NPP+
Sbjct: 107 VLDPEAKLPQGEFDVAVINPPF 128


>gi|309778357|ref|ZP_07673282.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308913888|gb|EFP59703.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 203

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G V +   K  P  +   VD++ +A+E+AK NA  N +        SD + 
Sbjct: 62  QLLDMGCGYGVVGIVAKKAWPDKQVEMVDVNPRAVELAKDNAEKNNIEANIHV--SDVYE 119

Query: 160 SVEG-LFDVIVSNPP 173
            V G  F  I++NPP
Sbjct: 120 QVSGNTFTDIITNPP 134


>gi|269217822|ref|ZP_06161676.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212757|gb|EEZ79097.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 242

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 8/83 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDI------SCKALEIAKSNAVTNGVSERF 150
           DV RILDLG G GAV +   +  P  K  G+D+      S    E A +NA  NGV  R 
Sbjct: 82  DVERILDLGCGRGAVIVMAAQRFPEAKLTGIDLWRKSDQSGNGEEAATANAKANGVDSRI 141

Query: 151 DTLQSDW--FSSVEGLFDVIVSN 171
           D +  D       +G FD+I ++
Sbjct: 142 DFVTGDMTKLPFEDGSFDLITAS 164


>gi|265763915|ref|ZP_06092483.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256523|gb|EEZ27869.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 237

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            RILD+GTGTG V L +L +      + ++I  KA + A  N   +    R + +  D+ 
Sbjct: 39  ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGKAAQQAAENITRSPWGSRIEVVCQDFR 97

Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +S+      +D IVSNPPY      D L       D + +     D LS Y  +  GVS
Sbjct: 98  LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             L+ +G  +V I  +       I  S+ L+
Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|223934049|ref|ZP_03626001.1| type I restriction-modification system, M subunit [Streptococcus
           suis 89/1591]
 gi|223897276|gb|EEF63685.1| type I restriction-modification system, M subunit [Streptococcus
           suis 89/1591]
          Length = 529

 Score = 42.7 bits (99), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 17/99 (17%)

Query: 93  IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D    + D   G+G++ L +  E P     K  G +++     +A+ N + + VS 
Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVSY 280

Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174
                   DTL+SDW   V+ L       FD +V+NPPY
Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319


>gi|325680236|ref|ZP_08159798.1| type I restriction-modification system, M subunit [Ruminococcus
           albus 8]
 gi|324108053|gb|EGC02307.1| type I restriction-modification system, M subunit [Ruminococcus
           albus 8]
          Length = 875

 Score = 42.7 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 29/127 (22%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  LL+   +A+ L     R  ++I D  +G+G++ + + K +  + G G +I+  A E+
Sbjct: 213 EVSLLMSEIVAYHL---RDRKEIKIYDPTSGSGSLLINIGKSAARYMGTGNNIAYYAQEL 269

Query: 137 AKS-------NAVTNGVSERF------DTLQSDW--FSS------VEGLF-----DVIVS 170
            ++       N V  G+          DTL+ DW  FS       +EG +     D +VS
Sbjct: 270 KQNTYNLTRMNLVMRGIKANMIETRCGDTLEDDWPYFSEDDKGVKIEGTYDPLYVDAVVS 329

Query: 171 NPPYIES 177
           NPPY ++
Sbjct: 330 NPPYSQN 336


>gi|320010002|gb|ADW04852.1| methyltransferase small [Streptomyces flavogriseus ATCC 33331]
          Length = 528

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++ V   LDLGTG+G    AL   S   +    D++ +ALE  +     +G +   D  +
Sbjct: 184 RKPVTSALDLGTGSG--IQALHAASHAGRVTATDVNPRALEFTRLTLALSGAAP-ADLRE 240

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP+   VI     L  R        DGG+ G    RT+    
Sbjct: 241 GSLFDPVGAETFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQA 289

Query: 214 SRHLNKDGLCS 224
             HL + G   
Sbjct: 290 GEHLAEGGYAQ 300


>gi|290892603|ref|ZP_06555596.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290557912|gb|EFD91433.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 201

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 39/74 (52%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +    D++ +ALE+AK NA  N ++       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMADVNLRALELAKENAEINKITNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|312197025|ref|YP_004017086.1| O-methyltransferase family 2 [Frankia sp. EuI1c]
 gi|311228361|gb|ADP81216.1| O-methyltransferase family 2 [Frankia sp. EuI1c]
          Length = 371

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 33/57 (57%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+ DLG G+G   + ++K +P   GVG+D++  ++E+A       G+++R    Q D
Sbjct: 174 RVADLGCGSGGRLVRIMKRNPGVTGVGIDLAPASVELAGQVIAAEGLADRLSVRQGD 230


>gi|294815596|ref|ZP_06774239.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|326443946|ref|ZP_08218680.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|294328195|gb|EFG09838.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
          Length = 239

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 65/144 (45%), Gaps = 21/144 (14%)

Query: 102 LDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           L++G GTG  AV  AL   S       +DI+ KA+    +NA  +GVS+R   L SD ++
Sbjct: 75  LEVGCGTGVIAVTAAL---SGCTSVTALDINEKAIANTVANAERHGVSDRVRALHSDMYT 131

Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           ++     FD I  N P  Y+E        L    FDP      G  G + Y     G   
Sbjct: 132 ALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------GYRGQARYLA---GAHE 182

Query: 216 HLNKDG---LCSVEIGYNQKVDVV 236
           HL   G   L + ++G  +++D V
Sbjct: 183 HLADGGRLLLGTADLGDRERLDAV 206


>gi|224584496|ref|YP_002638294.1| transferase [Salmonella enterica subsp. enterica serovar Paratyphi
           C strain RKS4594]
 gi|224469023|gb|ACN46853.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|326624412|gb|EGE30757.1| Methyltransferase domain containing protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
          Length = 219

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 18  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 76

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 77  DDIQRWAPRQTVRFDLIISNPPYYE 101


>gi|254450580|ref|ZP_05064017.1| methyltransferase small [Octadecabacter antarcticus 238]
 gi|198264986|gb|EDY89256.1| methyltransferase small [Octadecabacter antarcticus 238]
          Length = 253

 Score = 42.7 bits (99), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 83/211 (39%), Gaps = 21/211 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLTL     +P       VD  L  +  R +    V  LDLG GTGA  L L    
Sbjct: 12  FLGGRLTLE----QPTKGYRAGVDPVLLAAAVRAQAGQSV--LDLGCGTGAALLCLATRV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL-FDVIVSNPPYIES 177
                 GV++  +  ++ + NA  N +     T    D  S +  L FD ++ NPPY + 
Sbjct: 66  SGLALHGVEVQPRYADLCRVNATANNIDTTIWTADLRDLPSDLRALTFDHVMVNPPYFKR 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +   L  RD            G +      D  +R L   G  ++    ++  D++R
Sbjct: 126 SSGNSSPLPDRDI--------AFAGDTATVNWIDTATRRLKPKGTLTMIQKADRLPDLLR 177

Query: 238 IFESRKLFLVNAF----KDYGGNDRVLLFCR 264
             + R L  +N +    +D    DR++L  R
Sbjct: 178 AIDER-LGAINVYPITGRDGRAADRIILRAR 207


>gi|291482478|dbj|BAI83553.1| hypothetical protein BSNT_00207 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 201

 Score = 42.7 bits (99), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+DS   F  P +E       LD+G G G + L+L  +        +D++ +A+E++
Sbjct: 46  SRLLIDS---FEEPEVEGS----FLDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
             NA  NG++      QSD FS+++    F  I++NPP
Sbjct: 99  NENAEQNGIT-NVKIYQSDLFSNIDSAQTFASILTNPP 135


>gi|119358085|ref|YP_912729.1| Mg-protoporphyrin IX methyl transferase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355434|gb|ABL66305.1| magnesium protoporphyrin O-methyltransferase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 231

 Score = 42.7 bits (99), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 3/69 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G GTG   + + KE   +K   VDI+ + ++ AK++A+  GV++  D  + +   S
Sbjct: 69  VLDAGCGTGLFSIRIAKEG--YKVKAVDIASQMVDKAKADAIKKGVAKNID-FEVNTIES 125

Query: 161 VEGLFDVIV 169
           V+G +DV+V
Sbjct: 126 VKGKYDVVV 134


>gi|294785502|ref|ZP_06750790.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_27]
 gi|294487216|gb|EFG34578.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_27]
          Length = 223

 Score = 42.7 bits (99), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D+ L F L    + K+++ ++LD+GTG G + + L       + +G+DI  + ++ A   
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPILLSNNEFLSELIGIDIQKENIDRANMA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +  +F+ +    + +    FDVI+SNPPY++
Sbjct: 88  LELNKIEKNIQFECMDIREYKN-SNYFDVIISNPPYMD 124


>gi|56412535|ref|YP_149610.1| hypothetical protein SPA0276 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361470|ref|YP_002141106.1| hypothetical protein SSPA0261 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81821605|sp|Q5PNB8|TRMN6_SALPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828623|sp|B5BAS2|TRMN6_SALPK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831261|sp|A9N0W9|TRMN6_SALPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|56126792|gb|AAV76298.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092946|emb|CAR58376.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127


>gi|284800547|ref|YP_003412412.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578]
 gi|284993733|ref|YP_003415501.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923]
 gi|284056109|gb|ADB67050.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578]
 gi|284059200|gb|ADB70139.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923]
          Length = 201

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N  +       S + +
Sbjct: 62  KILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNTHIYESSVYDN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|254293447|ref|YP_003059470.1| methyltransferase small [Hirschia baltica ATCC 49814]
 gi|254041978|gb|ACT58773.1| methyltransferase small [Hirschia baltica ATCC 49814]
          Length = 244

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA SL    K+   RIL+ G G GA  L+           G++   + L +A+ N   N 
Sbjct: 32  LAASLEAAPKQ---RILEAGCGAGAALLSCAHRLQGVHVAGLERDERMLALAQQNVAENA 88

Query: 146 VSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLG 184
           + +R +  Q D  +  + L   +D + SNPP+     +  +G
Sbjct: 89  LQDRVEVFQGDVSNRPDSLLNAYDQVFSNPPFFNPSTIQAVG 130


>gi|209964970|ref|YP_002297885.1| methyltransferase small domain protein [Rhodospirillum centenum SW]
 gi|209958436|gb|ACI99072.1| methyltransferase small domain protein [Rhodospirillum centenum SW]
          Length = 254

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L+LG G GA  L L   +P  +   ++    A    +     NG  +R   
Sbjct: 45  VPARAGEAVLELGAGAGAATLCLAARAPGCRLTALERQPAAAAALRQGVALNGWQDRISV 104

Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176
           L+ D  +   GL    FD ++ NPP+ E
Sbjct: 105 LEGDLRAPPPGLPLNGFDRVLMNPPFYE 132


>gi|53713594|ref|YP_099586.1| putative RNA methyltransferase [Bacteroides fragilis YCH46]
 gi|81825000|sp|Q64TX7|TRMN6_BACFR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|52216459|dbj|BAD49052.1| putative RNA methyltransferase [Bacteroides fragilis YCH46]
          Length = 237

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 14/151 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            RILD+GTGTG V L +L +      + ++I  KA + A  N   +    R + +  D+ 
Sbjct: 39  ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGKAAQQAAENITRSPWGSRIEVVCQDFR 97

Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +S+      +D IVSNPPY      D L       D + +     D LS Y  +  GVS
Sbjct: 98  LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             L+ +G  +V I  +       I  S+ L+
Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|332163157|ref|YP_004299734.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318603959|emb|CBY25457.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667387|gb|ADZ44031.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330862842|emb|CBX72983.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           W22703]
          Length = 293

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAQ 268


>gi|307251172|ref|ZP_07533094.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306856838|gb|EFM88972.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 236

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +     +  +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVVIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPY 174
            D         FD+IVSNPPY
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPY 117


>gi|226307504|ref|YP_002767464.1| hypothetical protein RER_40170 [Rhodococcus erythropolis PR4]
 gi|226186621|dbj|BAH34725.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 372

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 33/206 (16%)

Query: 26  PDSVLDDRQRFFLTN-AIVRSLK--------HESIHRILGWRDFYNVRLTLSSDTFEP-R 75
           PD+ +   + F +T    VRSL+        HE  HR   + +  + R+  +   F P R
Sbjct: 121 PDAQVALTEAFGITGEPSVRSLRDILGAIGAHE-WHRKGVFIEALDARVHPAFGVFSPVR 179

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            E   LV SA    LP  E        D+GTGTG V  A+L           D   +AL+
Sbjct: 180 GEYVDLVTSA---PLPSTES-----AFDIGTGTG-VLAAVLARRGVKTVTATDQDPRALQ 230

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A++N    G  ++ + +++D F   EG   ++V NPP+I +     +   V  +DP  +
Sbjct: 231 CARTNLSRLGYGDQVNVVEADLFP--EGTAPLVVCNPPWIPAKATSPIEYAV--YDPAGA 286

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG 221
           +      L  + T   GV+ HL+  G
Sbjct: 287 M------LKGFLT---GVAAHLDDGG 303


>gi|163803827|ref|ZP_02197677.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4]
 gi|159172370|gb|EDP57247.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E +D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESKDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL+ ++ NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVADQLEVYLPQ--NQPEGLLADVVVAN 231


>gi|190151256|ref|YP_001969781.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264607|ref|ZP_07546189.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|262827836|sp|B3H2W9|TRMN6_ACTP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|189916387|gb|ACE62639.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870070|gb|EFN01832.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 236

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +     +  +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTRISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPY 174
            D         FD+IVSNPPY
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPY 117


>gi|313639730|gb|EFS04489.1| methyltransferase [Listeria seeligeri FSL S4-171]
          Length = 201

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 10/116 (8%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +N++ T  +  F        +++L+++   FSL  +  +    ILD+G G G + L + K
Sbjct: 27  FNMQFTSDNGVFSKNTVDFGSQVLIET---FSLQEVSGK----ILDVGCGYGPMGLTVAK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           E P  +   VD++ +ALE+A  NA  N ++       S + +  +  +  I+SNPP
Sbjct: 80  EFPESQVDMVDVNLRALELAGENAKLNQITNVRIYESSVYENVADEDYQAIISNPP 135


>gi|298524048|ref|ZP_07011457.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298493842|gb|EFI29136.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 238

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D+S  
Sbjct: 45  EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 92

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           A+E+A+  A   G++   F+   +  F+  +G FD IV
Sbjct: 93  AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 130


>gi|296188045|ref|ZP_06856437.1| type I restriction-modification system, M subunit [Clostridium
           carboxidivorans P7]
 gi|296047171|gb|EFG86613.1| type I restriction-modification system, M subunit [Clostridium
           carboxidivorans P7]
          Length = 529

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%)

Query: 93  IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D    + D   G+G++ L + +E P     K  G +++     +A+ N + + VS 
Sbjct: 221 VEKSDEFFNLYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHDVSY 280

Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                   DTL+SDW    +G        FD +V+NPPY      D   L+    DPR S
Sbjct: 281 NNMVLNNADTLESDWPDGPDGKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 336

Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225
             G +   S   Y  I   +  HLN  G  ++
Sbjct: 337 DYGKLAPASKADYAFILHSI-YHLNNTGTMAI 367


>gi|170781618|ref|YP_001709950.1| hypothetical protein CMS_1213 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156186|emb|CAQ01328.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 205

 Score = 42.7 bits (99), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 9/145 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G V L L   +P      VD++ +ALE+ ++NA + G+      L  D    
Sbjct: 63  LLDVGCGWGPVALDLAIRAPSATVWAVDVNERALELTRANARSLGLDNVNAVLPGD---V 119

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN- 218
            EGL F  + SNPP    V  + L   + D+ PR++ D     +      +D + R L  
Sbjct: 120 PEGLSFATVWSNPPI--RVGKEVLHQILLDWMPRLAPDADAWLVVQRNLGSDSLQRWLVD 177

Query: 219 --KDGLCSVEIGYNQKVDVVRIFES 241
               GL +     N+   V+R+  S
Sbjct: 178 ALPAGLETTRAASNKGFRVLRVHRS 202


>gi|289705358|ref|ZP_06501754.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
           [Micrococcus luteus SK58]
 gi|289557873|gb|EFD51168.1| putative ubiquinone/menaquinone biosynthesis methyltransferase
           [Micrococcus luteus SK58]
          Length = 247

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)

Query: 91  PRIEKRDVVR--------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           PR+ +R V R        +LDL TGTG +   +LK+ P  + VG DI+ + +E+ ++ A
Sbjct: 48  PRLVRRTVARANIPAQARVLDLATGTGDLAFEVLKQHPDAQVVGADIAAEMMEVGRARA 106


>gi|186477486|ref|YP_001858956.1| methyltransferase small [Burkholderia phymatum STM815]
 gi|184193945|gb|ACC71910.1| methyltransferase small [Burkholderia phymatum STM815]
          Length = 389

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G GTG V  A+L +    + V  D   +AL  A+ N    G  ++ + + +D F   E
Sbjct: 216 DIGVGTG-VLSAVLAKRGVARIVATDQDPRALACARENLTRLGYDKQVELIAADLFP--E 272

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   +IV NPP++ +     +   V D++ R+ L G + GL+ +
Sbjct: 273 GRAPLIVCNPPWLPARPASPIENAVYDYESRMLL-GFLSGLADH 315


>gi|291542118|emb|CBL15228.1| type I restriction system adenine methylase (hsdM) [Ruminococcus
           bromii L2-63]
          Length = 511

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 26/153 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESP------FFKGVGVDISCKALEIAKSNAVTNGVS 147
           E   V  + D   G+G++ L +  E P        K  G +++     +A+ N + +GVS
Sbjct: 201 ESDSVFSVYDPTCGSGSLLLTVQDEVPGGNNTGAVKFYGQELNTTTYNLARMNLMMHGVS 260

Query: 148 ------ERFDTLQSDWFSS--VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
                    DTL+SDW     V+G+     FD +V+NPPY  S   D    +++  DPR 
Sbjct: 261 FQNMSLSNADTLESDWPDGPDVKGIDHPRSFDAVVANPPY--SAHWDNSETKLK--DPRF 316

Query: 195 SLDGGI--DGLSHYRTIADGVSRHLNKDGLCSV 225
              G +     + Y  +  G+  HLN++G  ++
Sbjct: 317 KDYGKLAPKTKADYSFVLHGL-YHLNEEGTMAI 348


>gi|126664960|ref|ZP_01735943.1| 16S RNA G1207 methylase RsmC [Marinobacter sp. ELB17]
 gi|126630330|gb|EBA00945.1| 16S RNA G1207 methylase RsmC [Marinobacter sp. ELB17]
          Length = 364

 Score = 42.7 bits (99), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 7/132 (5%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVD 128
           +T    P T L V +A    +P       +R+LD   G G +   L  E      V  VD
Sbjct: 197 ETLASTPLTTLSVRAAP--GIPPTRAGKALRVLDFACGAGVIGAWLQTEENTDLSVDAVD 254

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE-- 186
           +  +AL  A+  A  + V  R + + SD  + ++G +  +VSNPP+   V  D    E  
Sbjct: 255 VQSQALLSAR--ATYDRVGARGEIIASDGIAGLDGRWQAVVSNPPFHSGVRTDMTMTERF 312

Query: 187 VRDFDPRISLDG 198
           VRD    +   G
Sbjct: 313 VRDLASHLEHGG 324


>gi|256784605|ref|ZP_05523036.1| hypothetical protein SlivT_08953 [Streptomyces lividans TK24]
 gi|289768490|ref|ZP_06527868.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289698689|gb|EFD66118.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 499

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+P T L V    A  L  +      R+LDLG G G +   LL+E  F + VGVD+S +
Sbjct: 276 EPKP-TPLAVHRREAI-LTALRDHAAARVLDLGCGEGHLVRELLREPRFTEIVGVDVSVR 333

Query: 133 ALEIAKSNAVTNGVSER 149
           AL IA      + + ER
Sbjct: 334 ALTIASRRLKLDRMGER 350


>gi|126434000|ref|YP_001069691.1| methyltransferase small [Mycobacterium sp. JLS]
 gi|126233800|gb|ABN97200.1| methyltransferase small [Mycobacterium sp. JLS]
          Length = 507

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 15/131 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTG G   L L   S     V  D + +AL +A + A  NG+S  +D      F 
Sbjct: 168 RALDLGTGCGIQALHLDAHSSEI--VATDTNERALALAAATARLNGMS--WDLRCGSLFE 223

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  FD+IVSNPP++       +G   RD+   I  D G+ G +  R + + VS HL 
Sbjct: 224 PVAGERFDLIVSNPPFV-------VGAGARDY---IYRDSGMVGDALCRNLIERVSDHLE 273

Query: 219 KDGLCSVEIGY 229
             G   V   +
Sbjct: 274 PGGTAHVMANW 284


>gi|16765962|ref|NP_461577.1| transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|238912707|ref|ZP_04656544.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|81853695|sp|Q8ZMX8|TRMN6_SALTY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831275|sp|C0PVY6|TRMN6_SALPC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|16421192|gb|AAL21536.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|261247840|emb|CBG25669.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994782|gb|ACY89667.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159193|emb|CBW18708.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913636|dbj|BAJ37610.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|322613359|gb|EFY10301.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620437|gb|EFY17302.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625095|gb|EFY21924.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629461|gb|EFY26237.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633848|gb|EFY30587.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635454|gb|EFY32165.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639870|gb|EFY36549.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644244|gb|EFY40788.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649936|gb|EFY46356.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654881|gb|EFY51198.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658191|gb|EFY54457.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661737|gb|EFY57955.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669718|gb|EFY65864.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673275|gb|EFY69380.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674936|gb|EFY71023.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682959|gb|EFY78977.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685620|gb|EFY81615.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323130980|gb|ADX18410.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323191952|gb|EFZ77190.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200415|gb|EFZ85496.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201314|gb|EFZ86381.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208385|gb|EFZ93325.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211539|gb|EFZ96377.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215971|gb|EGA00703.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221752|gb|EGA06160.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225640|gb|EGA09867.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229358|gb|EGA13482.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235327|gb|EGA19411.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237487|gb|EGA21550.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245242|gb|EGA29243.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246467|gb|EGA30448.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254002|gb|EGA37824.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323259052|gb|EGA42700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261975|gb|EGA45540.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267758|gb|EGA51239.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269683|gb|EGA53135.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332989571|gb|AEF08554.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 245

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127


>gi|70727465|ref|YP_254381.1| hypothetical protein SH2466 [Staphylococcus haemolyticus JCSC1435]
 gi|68448191|dbj|BAE05775.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 202

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I D+G G G + L + K SP  +   VD++ +AL +A+ N   N + +     +SD  S 
Sbjct: 64  IADVGCGYGPIGLMIAKVSPHHQITMVDVNKRALNLAEKNKKANQI-DNVIIKESDGLSQ 122

Query: 161 V-EGLFDVIVSNPP 173
           + +  FD +++NPP
Sbjct: 123 LKDSHFDYVLTNPP 136


>gi|487713|emb|CAA55769.1| lmbW [Streptomyces lincolnensis]
          Length = 318

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+LD+G G G + +      P   G+G+DI   A+E+A+  A   GV++R + 
Sbjct: 135 MRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRVEF 194

Query: 153 LQSDWFSSVE 162
           +  D F+  +
Sbjct: 195 VVGDAFAPAD 204


>gi|50122208|ref|YP_051375.1| hypothetical protein ECA3286 [Pectobacterium atrosepticum SCRI1043]
 gi|81827048|sp|Q6D211|TRMN6_ERWCT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|49612734|emb|CAG76184.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 248

 Score = 42.7 bits (99), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             R+LD+G+G+G + L L + S P  +   V++   A + AK N+  +  ++R      D
Sbjct: 48  ATRVLDIGSGSGLLALMLAQRSEPHVRIDAVELDSAASQQAKENSAASPWADRITVYAED 107

Query: 157 W--FSSVEGL-FDVIVSNPPY 174
              FS++    + +I+SNPPY
Sbjct: 108 IVSFSAMRTADYSLIISNPPY 128


>gi|302873026|ref|YP_003841659.1| methyltransferase small [Clostridium cellulovorans 743B]
 gi|307688819|ref|ZP_07631265.1| methyltransferase small [Clostridium cellulovorans 743B]
 gi|302575883|gb|ADL49895.1| methyltransferase small [Clostridium cellulovorans 743B]
          Length = 244

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +++    R++DL TGTG +   L  ++     VG++I  + +E+A    
Sbjct: 31  VDAVLLANFANVKRSH--RVIDLCTGTGIIPFILAGKTESNSIVGIEIQDEFVEMADRTV 88

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ER       L+   F    GL DV+  NPPY
Sbjct: 89  EYNKLQERVSFHCRDLKDLAFLKTLGLVDVVTVNPPY 125


>gi|163859173|ref|YP_001633471.1| ribosomal protein L11 methyltransferase [Bordetella petrii DSM
           12804]
 gi|163262901|emb|CAP45204.1| Ribosomal protein L11 methyltransferase [Bordetella petrii]
          Length = 276

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 18/142 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P PE  +     +A+  P+        ++DLG+G G + +A +++    +  GVDI  
Sbjct: 40  FVPTPEDAVAKMLDMAYVGPQDT------VIDLGSGDGRIAIAAVRDRKAARATGVDIDP 93

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           + +  A++NA   GV +R   +Q       + LF+  +S    +   ++  + L++R   
Sbjct: 94  ERIAEARANAKHAGVQDRVRFVQ-------QNLFETDISKATVLTMYLLPDVNLKLR--- 143

Query: 192 PRI--SLDGGIDGLSHYRTIAD 211
           PRI  +L  G   +SH  T+ D
Sbjct: 144 PRILSNLAPGTRVVSHAFTMGD 165


>gi|134098368|ref|YP_001104029.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338]
 gi|291006930|ref|ZP_06564903.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910991|emb|CAM01104.1| probable rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 505

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V  +LDLGTG G    AL   +   +    D+S +AL +A +    N V    +  +
Sbjct: 154 RRPVGSVLDLGTGCG--VQALHASTHAERVTATDVSKRALALADATFRLNRVD--VELAE 209

Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175
            +WF  V G  FD IV NPP++
Sbjct: 210 GEWFEPVRGRRFDQIVCNPPFV 231


>gi|320094007|ref|ZP_08025832.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319979051|gb|EFW10569.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 203

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWF 158
           +LDLG G G + + +  ESP      VD++ +AL++ + NA  NG +     +  ++   
Sbjct: 63  LLDLGCGWGPLAVVMGLESPGATVWAVDVNTRALDLTERNAEANGAANVSAMNAGEALER 122

Query: 159 SSVEGL-FDVIVSNPP 173
           +  EG+ FD I SNPP
Sbjct: 123 ARSEGVRFDAIWSNPP 138


>gi|295397937|ref|ZP_06807994.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563]
 gi|294973822|gb|EFG49592.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563]
          Length = 217

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G V + +    P     GVDIS +A+ +AK NA  N V      + + + + 
Sbjct: 77  LLDLGAGYGPVGVIMGTMLPDRAIYGVDISERAIGLAKDNAAANHVDNVTFQVSNAYEAI 136

Query: 161 VEGLFDVIVSNPP 173
            +  F VI++NPP
Sbjct: 137 AKRDFGVILTNPP 149


>gi|283786192|ref|YP_003366057.1| DNA-binding protein [Citrobacter rodentium ICC168]
 gi|282949646|emb|CBG89265.1| putative DNA-binding protein [Citrobacter rodentium ICC168]
          Length = 245

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           V RILD+GTG+G + L L + +   K V    V++  +A   A+ N   +  ++R     
Sbjct: 45  VKRILDIGTGSGLLALMLAQRTD--KSVIIDAVELDDEAAAQAQENVAGSPWADRVSVYT 102

Query: 155 ---SDWFSSVEGLFDVIVSNPPY 174
                W +   G FD+I+SNPPY
Sbjct: 103 GAIQHWAARQTGKFDLIISNPPY 125


>gi|238764616|ref|ZP_04625562.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC
           33638]
 gi|238697206|gb|EEP89977.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC
           33638]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 167 VIDFGCGSGILAIAALKLG-AKRAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 225

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 226 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVTGGHLGLSGVLATQAAGVAQ 273


>gi|68249024|ref|YP_248136.1| O-methyltransferase [Haemophilus influenzae 86-028NP]
 gi|68057223|gb|AAX87476.1| predicted O-methyltransferase [Haemophilus influenzae 86-028NP]
          Length = 240

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R    Q+D   
Sbjct: 47  ILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130


>gi|170717884|ref|YP_001784939.1| type I restriction-modification system, M subunit [Haemophilus
           somnus 2336]
 gi|168826013|gb|ACA31384.1| type I restriction-modification system, M subunit [Haemophilus
           somnus 2336]
          Length = 537

 Score = 42.4 bits (98), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           + ++   + D   G+G++ L +  E P  K +   G +++     +A+ N + +GVS + 
Sbjct: 222 DNQETFLVYDPTMGSGSLLLTVGNELPQSKPIKYYGQELNTTTYNLARMNLMMHGVSYKN 281

Query: 150 -----FDTLQSDWFSSVEGL--------FDVIVSNPPY 174
                 DTL+SDW   ++          FD +V+NPPY
Sbjct: 282 MTLSNADTLESDWPEGLDAQGIDQPLCRFDAVVANPPY 319


>gi|315633345|ref|ZP_07888636.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393]
 gi|315477845|gb|EFU68586.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393]
          Length = 235

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 5/87 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           +ILDLG+G+G + L L + S     +  V+I   A + A  N + +    +    Q D  
Sbjct: 40  QILDLGSGSGLIALMLAQRSSAESRICAVEIDHAAAQQACENVLISPWKNKIQVYQQDID 99

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDC 182
            + +     FD+IV+NPPY ++  VDC
Sbjct: 100 SFCTQTAERFDLIVANPPYFQTG-VDC 125


>gi|312889325|ref|ZP_07748879.1| methyltransferase small [Mucilaginibacter paludis DSM 18603]
 gi|311298202|gb|EFQ75317.1| methyltransferase small [Mucilaginibacter paludis DSM 18603]
          Length = 235

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 15/128 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157
           ILD+GTGTG + L + ++ P      V++   A + A  N   +  S +         ++
Sbjct: 38  ILDIGTGTGVIALMMAQKFPGAVIDAVELDTAAAQTAGKNFGNSNFSNKLHVHPLGFEEY 97

Query: 158 FS-SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F+   E  +D+IV+NPP YI S  ++  G        +++L    D  + +  +   VS 
Sbjct: 98  FNHHPEKKYDLIVANPPFYINS--LEAAG-------DKMNLAKHTDQ-TFFEVLIKAVSA 147

Query: 216 HLNKDGLC 223
           HL   GLC
Sbjct: 148 HLASKGLC 155


>gi|237732561|ref|ZP_04563042.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908100|gb|EEH94018.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 268

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 9/91 (9%)

Query: 98  VVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           V RILD+GTG+G + L L +   E+     V +D+   A + A+ N   +    R     
Sbjct: 68  VKRILDIGTGSGLLALMLAQRTDENVIIDAVELDVD--AAQQAQENIAQSPWMHRVSVHT 125

Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDC 182
            D   W       FD+I+SNPPY E   V+C
Sbjct: 126 EDAQQWIPRQTVRFDLIISNPPYYEQG-VEC 155


>gi|15607700|ref|NP_215074.1| benzoquinone methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|15839958|ref|NP_334995.1| hypothetical protein MT0586 [Mycobacterium tuberculosis CDC1551]
 gi|31791742|ref|NP_854235.1| benzoquinone methyltransferase [Mycobacterium bovis AF2122/97]
 gi|121636478|ref|YP_976701.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660329|ref|YP_001281852.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis
           H37Ra]
 gi|148821761|ref|YP_001286515.1| benzoquinone methyltransferase [Mycobacterium tuberculosis F11]
 gi|167968367|ref|ZP_02550644.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis H37Ra]
 gi|215402326|ref|ZP_03414507.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|215410097|ref|ZP_03418905.1| benzoquinone methyltransferase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425795|ref|ZP_03423714.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|215429392|ref|ZP_03427311.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|215444670|ref|ZP_03431422.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T85]
 gi|218752198|ref|ZP_03530994.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|219556396|ref|ZP_03535472.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|224988950|ref|YP_002643637.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797492|ref|YP_003030493.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           1435]
 gi|254230903|ref|ZP_04924230.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C]
 gi|254363519|ref|ZP_04979565.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549515|ref|ZP_05139962.1| benzoquinone methyltransferase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185434|ref|ZP_05762908.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|260199563|ref|ZP_05767054.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|260203717|ref|ZP_05771208.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289441945|ref|ZP_06431689.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|289446107|ref|ZP_06435851.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|289552812|ref|ZP_06442022.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|289568488|ref|ZP_06448715.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|289573152|ref|ZP_06453379.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289744273|ref|ZP_06503651.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|289749059|ref|ZP_06508437.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|289752599|ref|ZP_06511977.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289756637|ref|ZP_06516015.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289760679|ref|ZP_06520057.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|294996070|ref|ZP_06801761.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 210]
 gi|297633050|ref|ZP_06950830.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           4207]
 gi|297730027|ref|ZP_06959145.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           R506]
 gi|313657355|ref|ZP_07814235.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           V2475]
 gi|2114022|emb|CAB08971.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880098|gb|AAK44809.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31617328|emb|CAD93437.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121492125|emb|CAL70590.1| POssible benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599962|gb|EAY58972.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C]
 gi|134149033|gb|EBA41078.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504481|gb|ABQ72290.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis
           H37Ra]
 gi|148720288|gb|ABR04913.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis F11]
 gi|224772063|dbj|BAH24869.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318995|gb|ACT23598.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           1435]
 gi|289414864|gb|EFD12104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|289419065|gb|EFD16266.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|289437444|gb|EFD19937.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|289537583|gb|EFD42161.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289542242|gb|EFD45890.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|289684801|gb|EFD52289.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|289689646|gb|EFD57075.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|289693186|gb|EFD60615.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289708185|gb|EFD72201.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|289712201|gb|EFD76213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326902389|gb|EGE49322.1| benzoquinone methyltransferase [Mycobacterium tuberculosis W-148]
 gi|328457277|gb|AEB02700.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           4207]
          Length = 241

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D+S  
Sbjct: 48  EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 95

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           A+E+A+  A   G++   F+   +  F+  +G FD IV
Sbjct: 96  AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 133


>gi|315038269|ref|YP_004031837.1| type I restriction-modification system, M subunit [Lactobacillus
           amylovorus GRL 1112]
 gi|312276402|gb|ADQ59042.1| type I restriction-modification system, M subunit [Lactobacillus
           amylovorus GRL 1112]
          Length = 557

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 18/131 (13%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R+F +     + + + P+  +ELL       +L   +  + + + D   G+G++ L   K
Sbjct: 201 REFASESGKKAGEFYTPQKVSELLT----KLTLVGKKYPEGMTVYDPAMGSGSLLLNFKK 256

Query: 118 ESPFFKG--------VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163
               F G         G +I+     +A+ N + +GV        + DTL +DW    + 
Sbjct: 257 YIKDFAGGDPNKVIYYGQEINISTFNLARMNMILHGVDSGNQHLRQGDTLDADWPPISQT 316

Query: 164 LFDVIVSNPPY 174
           +FD +V NPPY
Sbjct: 317 MFDAVVMNPPY 327


>gi|189204900|ref|XP_001938785.1| hypothetical protein PTRG_08453 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985884|gb|EDU51372.1| hypothetical protein PTRG_08453 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 301

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------AVTNGVS 147
           +D  RILDLG GTG  C+ +  E P  + +GVD+S    +    N         +    S
Sbjct: 154 KDPKRILDLGCGTGIWCMDMADEYPGAEILGVDLSPIQPQFTPPNCKFEIDDVTLPWTYS 213

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +RFD      F ++ GL+  I S P   E +
Sbjct: 214 QRFD------FINIRGLYGSIRSWPALYEQI 238


>gi|19704117|ref|NP_603679.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|296328675|ref|ZP_06871192.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|19714323|gb|AAL94978.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|296154274|gb|EFG95075.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 243

 Score = 42.4 bits (98), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 12/117 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F         +DS L      I K+++ +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFN------FSIDSLLISEFVNI-KKNIKKILDLGTGNAAIPLFLSKKTS- 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174
            K  G++I   +  +A  N   N ++E+    +D +++       G FD+++SNPP+
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFDIGSFDIVISNPPF 123


>gi|237744555|ref|ZP_04575036.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           7_1]
 gi|229431784|gb|EEO41996.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           7_1]
          Length = 202

 Score = 42.4 bits (98), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 8/98 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    VG+DI  + ++ A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANK 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               N + +  +F+ +    +      FD+I+SNPPY+
Sbjct: 87  ALQLNKIEKNIQFECMDIREYKK-SNYFDIIISNPPYM 123


>gi|256821947|ref|YP_003145910.1| methyltransferase small [Kangiella koreensis DSM 16069]
 gi|256795486|gb|ACV26142.1| methyltransferase small [Kangiella koreensis DSM 16069]
          Length = 197

 Score = 42.4 bits (98), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PR      +D      L  ++       LDLG G GA+ + + K++P  + + VD   
Sbjct: 36  FSPRN-----IDDGTIMLLKYMDIETTDNCLDLGCGYGALGITMAKQAPQGQTLMVDKDF 90

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            A++ A  N   NGV+     L + + +  E  F+VI SN P
Sbjct: 91  VAVDYANKNCELNGVTNATARLSNGFSAVTEKNFNVICSNIP 132


>gi|323968023|gb|EGB63435.1| gyfiC [Escherichia coli M863]
 gi|327252285|gb|EGE63957.1| methyltransferase small domain protein [Escherichia coli STEC_7v]
          Length = 245

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELEGEAATQAQENINQSPWAERINIYPAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTARFDLIISNPPYYQQG-VEC 132


>gi|319898056|ref|YP_004136253.1| o-methyltransferase [Haemophilus influenzae F3031]
 gi|317433562|emb|CBY81946.1| predicted O-methyltransferase [Haemophilus influenzae F3031]
          Length = 232

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R    Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|269115260|ref|YP_003303023.1| DNA methylase [Mycoplasma hominis]
 gi|268322885|emb|CAX37620.1| DNA methylase [Mycoplasma hominis ATCC 23114]
          Length = 184

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 8/90 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQS 155
           ++LDL +G+GA CL  L     F  V VD + +A++I K N   N + E     F+    
Sbjct: 45  KVLDLFSGSGAFCLEALSRGAKF-AVCVDKNAEAIKIIKEN--QNSLKEPNLKIFNIDAL 101

Query: 156 DWFSSVEGLFDVIVSNPPYIE-SVIVDCLG 184
           ++ ++   +FD I  +PP++E  ++V+CL 
Sbjct: 102 NFLNNNVEVFDYIYLDPPFVEKKLLVECLN 131


>gi|238896026|ref|YP_002920762.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|238548344|dbj|BAH64695.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 252

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 16/88 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150
           V  +LD+G G+G + L L + +      G D+  +A+E+       A+ NA+ +  + R 
Sbjct: 52  VKHVLDIGAGSGLLALMLAQRT------GDDVHVEAVELDEEAAAQARENALASPWASRI 105

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175
           +  Q+D   W  S    +++I+SNPP+ 
Sbjct: 106 EVWQADIHQWQPSQTRRYELIISNPPFF 133


>gi|146284322|ref|YP_001174475.1| hypothetical protein PST_4010 [Pseudomonas stutzeri A1501]
 gi|145572527|gb|ABP81633.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 398

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCVEGDA 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDV++++PP +I+           R  D +       +G + YR + 
Sbjct: 280 FEAMKELKNAEERFDVVITDPPAFIK-----------RKKDLK-------NGEAAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R LNKDG+     CS+ +
Sbjct: 322 ETAMRLLNKDGILVSASCSMHL 343


>gi|145630402|ref|ZP_01786183.1| phosphatidylserine synthase [Haemophilus influenzae R3021]
 gi|144984137|gb|EDJ91574.1| phosphatidylserine synthase [Haemophilus influenzae R3021]
          Length = 232

 Score = 42.4 bits (98), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R    Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|239832294|ref|ZP_04680623.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium
           LMG 3301]
 gi|239824561|gb|EEQ96129.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium
           LMG 3301]
          Length = 285

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NGV+E   T  ++ F   
Sbjct: 151 LDLGTGSAVLAIAIAKLAP-IPVLATDIDPVAVTVAAENAAKNGVAEHIVTATAEGFGHA 209

Query: 162 ----EGLFDVIVSN---PPYIE 176
                  FD+IV+N    P IE
Sbjct: 210 IFRSYSPFDLIVANILANPLIE 231


>gi|159796251|gb|ABX00619.1| LmbW [Streptomyces lincolnensis]
          Length = 350

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 37/70 (52%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+LD+G G G + +      P   G+G+DI   A+E+A+  A   GV++R + 
Sbjct: 167 MRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRVEF 226

Query: 153 LQSDWFSSVE 162
           +  D F+  +
Sbjct: 227 VVGDAFAPAD 236


>gi|149912231|ref|ZP_01900809.1| hypothetical protein PE36_22685 [Moritella sp. PE36]
 gi|149804690|gb|EDM64742.1| hypothetical protein PE36_22685 [Moritella sp. PE36]
          Length = 247

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 14/100 (14%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
            D   AF+ P       +++LD+GTG+G + L L +      + + +DI   A + AK N
Sbjct: 35  ADVTTAFTAP-------LKVLDIGTGSGLISLMLAQRCQGDMQAIAIDIDVSACQQAKKN 87

Query: 141 ----AVTNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPY 174
                  + ++ +   LQ  +  +      FD++VSNPPY
Sbjct: 88  IDNSPWPSSIAVKHVALQAFTQAYKDEPAKFDLVVSNPPY 127


>gi|152994142|ref|YP_001338977.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1]
 gi|226712959|sp|A6VRG3|RSMC_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150835066|gb|ABR69042.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1]
          Length = 353

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILD G G G + L L  ++   +   +D S  AL+  +     N VS+    + S+  
Sbjct: 210 ARILDFGCGDGIIALWLHNKTGA-RITALDDSVMALKATELTFAANQVSDAVTLIASNGL 268

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
             V+G F+ +V+NPP+   V  D
Sbjct: 269 DEVKGRFNYVVTNPPFHSGVNTD 291


>gi|326802942|ref|YP_004320760.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650229|gb|AEA00412.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 200

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 8/84 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E +   +ILDLG G G V + L    P      VD++ +AL +AK N   N V    D+ 
Sbjct: 56  EGKTYHKILDLGCGYGPVGVVLGDHYPEVHLDLVDVNERALALAKKNLALNQV----DSA 111

Query: 154 QSDWFSSVEGL----FDVIVSNPP 173
                S+ EGL    +D+I++NPP
Sbjct: 112 NFYLSSAYEGLSDHDYDLIITNPP 135


>gi|227499478|ref|ZP_03929589.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC
           35098]
 gi|227218540|gb|EEI83783.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC
           35098]
          Length = 461

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 12/92 (13%)

Query: 87  AFSLPRIEKRDVVRILDL--GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AF L RI+++  + +LDL  GTGT    +AL  +       G++I  +A+E AK NA+ N
Sbjct: 310 AFDLARIDEK--MNVLDLYSGTGTITQLMALKAKH----ATGIEIVEEAVEKAKENALLN 363

Query: 145 GVSERFDTLQSDWFSSVEGL---FDVIVSNPP 173
            + +  D L  D    +E +   +DV++ +PP
Sbjct: 364 KI-DNIDFLCGDVLEEIEKVSNRYDVVILDPP 394


>gi|70606437|ref|YP_255307.1| hypothetical protein Saci_0622 [Sulfolobus acidocaldarius DSM 639]
 gi|68567085|gb|AAY80014.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 200

 Score = 42.4 bits (98), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+  +L L+ D + P  +TEL+++         I+ +D   +LD+G+GTG + L  LK  
Sbjct: 9   FHGYKLCLNDDVYIPAEDTELIME--------MIKIKDGETVLDMGSGTGILSLHALKLG 60

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYI 175
              + + +D++  A +       +NG S    +    D   + +  FDV + NPPY+
Sbjct: 61  A-KRVLSIDVNPNAADATLCTLKSNGFSGNVLNCYLLDCIRNTK--FDVAIFNPPYL 114


>gi|293400626|ref|ZP_06644771.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305652|gb|EFE46896.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 220

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D++L  +  +I++ +  RILD+GT  GA+      + P +   GV+I   A ++A+ N 
Sbjct: 28  TDTSLLAAFMQIKQGE--RILDIGTNNGALLAVAATKQPAYL-YGVEIQEAACKLAEHNL 84

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              GV   F  L  D  +      DV++ NPPY +
Sbjct: 85  KDCGVP--FTILAGDASNMTLPKVDVVICNPPYFK 117


>gi|254822596|ref|ZP_05227597.1| hypothetical protein MintA_21884 [Mycobacterium intracellulare ATCC
           13950]
          Length = 222

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+++                +LD G G  AV L L +    F  VG+D S  
Sbjct: 25  EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 72

Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+E+A+  A   G+ S  FD      F+  +G F  IV      +S +   + +E+RD  
Sbjct: 73  AIELAREKAARRGLTSASFDVADISAFTGYDGRFGTIV------DSTLFHSMPVELRDGY 126

Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFESR 242
            +  +     G S++  +       ADG    + +D L      Y    ++   RI  + 
Sbjct: 127 QQSIVRAAAPGASYFVLVFDRAAMPADGPVNAVTEDELRDAVSKYWVIDEIRPARIHANV 186

Query: 243 KLFLVNAFKDYGGND 257
               +  F+ + G D
Sbjct: 187 PESFLEGFQAFAGAD 201


>gi|288574648|ref|ZP_06393005.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570389|gb|EFC91946.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 248

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +P     + VD+ L     ++ + +  RI +LG   GAV L L K       VG+DI  
Sbjct: 20  LQPLKGPRVNVDTVLLAGFSKVRRGE--RICELGCAHGAVSLILAKRKEV-SVVGLDIQE 76

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
             + +A+ N   N +S+R   +  D     + L    FDV+V+NPPY
Sbjct: 77  NLVHMAEKNRELNELSDRVSFIHGDLREIHKILPPQGFDVVVANPPY 123


>gi|195342065|ref|XP_002037622.1| GM18204 [Drosophila sechellia]
 gi|194132472|gb|EDW54040.1| GM18204 [Drosophila sechellia]
          Length = 224

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+ + F   +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAGFSMCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
            KA    +  A  NG   R D+++     ++     DV++ NPPY+
Sbjct: 77  PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYV 120


>gi|22299496|ref|NP_682743.1| hypothetical protein tlr1953 [Thermosynechococcus elongatus BP-1]
 gi|22295679|dbj|BAC09505.1| tlr1953 [Thermosynechococcus elongatus BP-1]
          Length = 218

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 8/87 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-N 144
           LA  LPR+++   +++LD+GTG G +   L +  P ++  G+D+S   L IA+ ++   N
Sbjct: 37  LAAVLPRVDQ--PLKVLDVGTGNGRILQLLHQRYPHWQLTGIDLSPAMLAIARHHSPQLN 94

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSN 171
            +     TL    F++    FDV++SN
Sbjct: 95  FIEGDAKTLP---FAAAS--FDVVISN 116


>gi|288934044|ref|YP_003438103.1| methyltransferase small [Klebsiella variicola At-22]
 gi|288888773|gb|ADC57091.1| methyltransferase small [Klebsiella variicola At-22]
          Length = 245

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 16/88 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150
           V  +LD+G G+G + L L + +      G D+   A+E+       A+ NA+ +  S R 
Sbjct: 45  VKHVLDIGAGSGLLALMLAQRT------GHDVQVDAVELDEEAAAQARENALASPWSSRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175
           +  Q+D   W  S    +++I+SNPP+ 
Sbjct: 99  EVCQADIHQWQPSQTRRYELIISNPPFF 126


>gi|242241085|ref|YP_002989266.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703]
 gi|242133142|gb|ACS87444.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS     GG  GLS    + A+GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISALPKAGGHLGLSGVLASQAEGVAK 268


>gi|237741850|ref|ZP_04572331.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429498|gb|EEO39710.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13]
          Length = 223

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 83  DSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSN 140
           D+ L F L ++   +  +++LD+GTG G + + LL ++ F    +G+DI  + ++ A   
Sbjct: 29  DTILLFKLFQVSLNKKNIKLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIDRANMA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +  +F  +    + +    FDVI+SNPPY++
Sbjct: 88  LELNKIEKNIQFKCMDIREYKN-SNYFDVIISNPPYMD 124


>gi|226228549|ref|YP_002762655.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226091740|dbj|BAH40185.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 556

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R L+L +GTG   L             +DI+ ++   A  NA  N +      LQ D ++
Sbjct: 206 RYLELCSGTGIAALDAAHRG-AEHAWAIDITARSTHFAAFNARMNALPN-VTALQGDLYA 263

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            VEG  FDVI ++PPY+ +                I  DGG DG    R I   +   L 
Sbjct: 264 PVEGQQFDVISAHPPYVPATSTAL-----------IYRDGGEDGEQISRAIMARLPDFLA 312

Query: 219 KDGL 222
            +G+
Sbjct: 313 PEGI 316


>gi|157691441|ref|YP_001485903.1| TrmA family RNA methyltransferase [Bacillus pumilus SAFR-032]
 gi|157680199|gb|ABV61343.1| TrmA family RNA methyltransferase [Bacillus pumilus SAFR-032]
          Length = 465

 Score = 42.4 bits (98), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 29/160 (18%)

Query: 35  RFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETEL 80
           RF    +IV+++  +  + I G      W + Y      +++  +S+ +F +  P +T++
Sbjct: 240 RFPHIRSIVQNVNSKKTNVIFGDETTVLWGEEYIYDTIGDIKFAISARSFYQVNPAQTKM 299

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L D AL ++    E +    ++D   G G + L L +++   +  GV+I  +A+E AK N
Sbjct: 300 LYDKALEYA----ELQGEETVIDAYCGIGTISLFLAQKAG--RVYGVEIVPEAIEDAKRN 353

Query: 141 AVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           A  NG++         +T+  +W+   EG+  D +V +PP
Sbjct: 354 AALNGINNVEFAVGEAETVIPNWYK--EGIKADTLVVDPP 391


>gi|327482706|gb|AEA86016.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 398

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCVEGDA 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDV++++PP +I+           R  D +       +G + YR + 
Sbjct: 280 FEAMKELKNAEERFDVVITDPPAFIK-----------RKKDLK-------NGEAAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R LNKDG+     CS+ +
Sbjct: 322 ETAMRLLNKDGILVSASCSMHL 343


>gi|296271470|ref|YP_003654102.1| methyltransferase small [Thermobispora bispora DSM 43833]
 gi|296094257|gb|ADG90209.1| methyltransferase small [Thermobispora bispora DSM 43833]
          Length = 490

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R LDLGTG+G   L L   +     V  D++ +AL +A+     +GV E  D  Q   
Sbjct: 150 VGRALDLGTGSGVQVLHLAGRASEI--VATDVNPRALCLARLTWALSGVGE-VDARQGSM 206

Query: 158 FSSV-EGLFDVIVSNPPYI 175
           +  V +  FD+IV+NPP++
Sbjct: 207 YDPVADERFDLIVANPPFV 225


>gi|86147887|ref|ZP_01066192.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222]
 gi|85834314|gb|EAQ52467.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+E+ +          EGL  DV+V+N
Sbjct: 182 AAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231


>gi|293394169|ref|ZP_06638469.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM
           4582]
 gi|291423147|gb|EFE96376.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM
           4582]
          Length = 293

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|330834240|ref|YP_004408968.1| hypothetical protein Mcup_0376 [Metallosphaera cuprina Ar-4]
 gi|329566379|gb|AEB94484.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 165

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P PE  ++        + ++   DVV   DLG G G + +A +K     K VGVD+S 
Sbjct: 13  YVPTPEKVVM----KMLEIAKVGSEDVV--YDLGCGDGRIIIAAVKNFGAKKAVGVDLSD 66

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158
           + L+ A+ NA+ NGV ++ +  ++++ 
Sbjct: 67  ERLKEAEQNAIQNGVRDKIELRKNNFL 93


>gi|308174333|ref|YP_003921038.1| 50S ribosomal protein L11 methyltransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607197|emb|CBI43568.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           DSM 7]
          Length = 311

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93
            W+ +Y+         +  + +T+ P    EL++  D  +AF             +L RI
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172

Query: 94  -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +K D  R++D+GTG+G  ++  A+LK          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLKAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
           +  Q++    + G  DVIV+N
Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248


>gi|84393067|ref|ZP_00991833.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01]
 gi|84376319|gb|EAP93201.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+E+ +          EGL  DV+V+N
Sbjct: 182 AAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231


>gi|189485521|ref|YP_001956462.1| putative RNA methyltransferase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287480|dbj|BAG14001.1| putative RNA methyltransferase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 449

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWF 158
           +LDL  GTGA+ +++       + +GV+   +A++ AK NA+ N V  +E + +   DW 
Sbjct: 309 LLDLYCGTGAIGISMAHNVK--RVIGVECIGQAIDNAKENALANNVFNAEFYASDAEDWI 366

Query: 159 SSVEGLFDVIVSNPP 173
              +  FD +V +PP
Sbjct: 367 KENKSCFDAVVVDPP 381


>gi|156548692|ref|XP_001602591.1| PREDICTED: similar to prip interacting protein. pimt [Nasonia
           vitripennis]
          Length = 577

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 15/155 (9%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  ++  A   E  +     +DI  K +E+A+ NA   GV +R + +  D+F   E L
Sbjct: 429 GAGGNSISFAFTCERVY----AIDIDPKKIEMARHNARIYGVEDRIEFIIGDFFCLAERL 484

Query: 165 F-DVIVSNPPYIESVIVDCLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKD-- 220
           F DV+  +PP+     +     ++ +  DP     GGI      + I+D ++  L K+  
Sbjct: 485 FGDVVFLSPPWGGPSYIQDKSFDIENIMDPH----GGIKLFEVSKRISDNIAYFLPKNIN 540

Query: 221 -GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
               ++  G   K+++ + F   +L  V A+  YG
Sbjct: 541 TLQLAMTAGPGSKIELEQNFLDSQLIAVTAY--YG 573


>gi|145632668|ref|ZP_01788402.1| predicted O-methyltransferase [Haemophilus influenzae 3655]
 gi|229846509|ref|ZP_04466617.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1]
 gi|262831319|sp|Q4QNC1|TRMN6_HAEI8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|144986863|gb|EDJ93415.1| predicted O-methyltransferase [Haemophilus influenzae 3655]
 gi|229810602|gb|EEP46320.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1]
          Length = 232

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R    Q+D   
Sbjct: 39  ILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|16077741|ref|NP_388555.1| RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308510|ref|ZP_03590357.1| hypothetical protein Bsubs1_03798 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312833|ref|ZP_03594638.1| hypothetical protein BsubsN3_03754 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317757|ref|ZP_03599051.1| hypothetical protein BsubsJ_03708 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322036|ref|ZP_03603330.1| hypothetical protein BsubsS_03794 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|50401309|sp|O31503|YEFA_BACSU RecName: Full=Uncharacterized RNA methyltransferase yefA
 gi|2632987|emb|CAB12493.1| putative RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 459

 Score = 42.4 bits (98), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 34/185 (18%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------WRDFY-- 61
           F+ R +       I++     D   +F    +IV+++     + I G      W + Y  
Sbjct: 219 FITRTSDFPHKAKIIE-----DITAQFPHVKSIVQNINPNKTNVIFGNETNVIWGEEYIY 273

Query: 62  ----NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
               +V+  +S+ +F +  PE T++L D AL ++    E +    ++D   G G + L L
Sbjct: 274 DLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCGIGTISLFL 329

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVI 168
            K++   K  GV+I  +A+E AK NA  NG +         +T+   W+   EG+  D +
Sbjct: 330 AKQAK--KVYGVEIVPEAIEDAKRNAELNGNTNAEFAVGEAETVIPKWYE--EGITADTL 385

Query: 169 VSNPP 173
           V +PP
Sbjct: 386 VVDPP 390


>gi|258511961|ref|YP_003185395.1| 50S ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478687|gb|ACV59006.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 316

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 96  RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R  +R++D+GTGTG  A+  AL+      + V +D+   A+  A  N  TNG+ +R D  
Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE---RVVAIDLDPVAVSAATDNVRTNGLEDRVDVR 232

Query: 154 QSDWFSSV--EGLFDVIVSN 171
           Q D  +++  +  FD+ V+N
Sbjct: 233 QGDLLAALRPDETFDLAVAN 252


>gi|225076469|ref|ZP_03719668.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
           NRL30031/H210]
 gi|224952148|gb|EEG33357.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
           NRL30031/H210]
          Length = 371

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++    D+GTG+G +  A+L +      +  D + KA+  A +N    G+++  +    D
Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACATANLERLGLNKAVNIQSID 250

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   E   D+IV NPP++ +       +E   +DP  ++              +GV +H
Sbjct: 251 LFP--ESCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVHKH 297

Query: 217 LNKDG 221
           LN +G
Sbjct: 298 LNPNG 302


>gi|29828866|ref|NP_823500.1| hypothetical protein SAV_2324 [Streptomyces avermitilis MA-4680]
 gi|29605971|dbj|BAC70035.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 495

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 33/57 (57%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           ++     R+LDLG G G +  ALLK+  F + VGVD+S +AL IA      + + ER
Sbjct: 294 LQASGAARVLDLGCGQGQLVQALLKDVRFTEIVGVDVSVRALTIAARRLKLDRLGER 350


>gi|152964456|ref|YP_001360240.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
 gi|151358973|gb|ABS01976.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
          Length = 508

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V R+LD+GTG G   L   + +   +    D S +AL++A  NA  N V+   D  Q
Sbjct: 166 RTPVERVLDIGTGCGIQALHASRHA--RRVTATDTSERALDLAAVNAALNEVA--LDLRQ 221

Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                 VE    F ++VSNPP+    ++      V  ++ R   DGG+ G S  + +  G
Sbjct: 222 GSLLEPVEAGEEFGLVVSNPPF----VITPRTAAVPTYEYR---DGGMPGDSLVQRLVGG 274

Query: 213 VSRHLNKDGLCSV 225
           V   L   G+  +
Sbjct: 275 VGSVLAPGGVAQL 287


>gi|261324107|ref|ZP_05963304.1| methyltransferase [Brucella neotomae 5K33]
 gi|261300087|gb|EEY03584.1| methyltransferase [Brucella neotomae 5K33]
          Length = 295

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 8/115 (6%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK + + K + + +   
Sbjct: 127 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADWIKNIDLYEADY 186

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D 
Sbjct: 187 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDV 238


>gi|167757655|ref|ZP_02429782.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
 gi|237735202|ref|ZP_04565683.1| 16S rRNA m(2)G 1207 methyltransferase [Mollicutes bacterium D7]
 gi|167702652|gb|EDS17231.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
 gi|229381978|gb|EEO32069.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. D7]
          Length = 197

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G   +AL    P  +   +D++ +AL +AK N   N +    +   S  + +
Sbjct: 61  LLDVGCGYGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEA--NVYLSSVYEN 118

Query: 161 VEGLFDVIVSNPP 173
           V   +DVIV+NPP
Sbjct: 119 VTNKYDVIVTNPP 131


>gi|57642070|ref|YP_184548.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis
           KOD1]
 gi|57160394|dbj|BAD86324.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis
           KOD1]
          Length = 417

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESP 120
           +R  L   T+   P +    +S  A +L R   E  +  ++LDL +G G   + L K   
Sbjct: 241 IREKLDDVTYLIHPNSFFQTNSYQAVNLVRKVAELVEGEKVLDLYSGVGTFGIYLAKRG- 299

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            FK  G++I+  A+E+AK NA  NGV   F   +    +S+   +D +V +PP
Sbjct: 300 -FKVEGIEINPFAVEMAKKNAQINGVDAEFRVGEDKDVNSLSE-YDTVVVDPP 350


>gi|21224309|ref|NP_630088.1| hypothetical protein SCO5972 [Streptomyces coelicolor A3(2)]
 gi|15020691|emb|CAC44586.1| hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 531

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 2/77 (2%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+P T L V    A  L  +      R+LDLG G G +   LL+E  F + VGVD+S +
Sbjct: 308 EPKP-TPLAVHRREAI-LTALRDHAAARVLDLGCGEGHLVRELLREPRFTEIVGVDVSVR 365

Query: 133 ALEIAKSNAVTNGVSER 149
           AL IA      + + ER
Sbjct: 366 ALTIASRRLKLDRMGER 382


>gi|23098223|ref|NP_691689.1| RNA methyltransferase [Oceanobacillus iheyensis HTE831]
 gi|50401583|sp|Q8ES75|Y768_OCEIH RecName: Full=Uncharacterized RNA methyltransferase OB0768
 gi|22776448|dbj|BAC12724.1| RNA methyltransferase [Oceanobacillus iheyensis HTE831]
          Length = 459

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 83/161 (51%), Gaps = 29/161 (18%)

Query: 34  QRFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETE 79
           ++F    +IV+++  +  + +LG      W + Y      ++   +S  +F +  P +T+
Sbjct: 236 EQFPQVKSIVQNVNDQRTNVVLGKKTKVLWGENYIYDKIGDLTFAISPKSFFQVNPVQTK 295

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +L D AL ++   I+K DVV  +D   G G++ L L +++   K  G+++  +A+E AK 
Sbjct: 296 VLYDKALEYA--NIDKDDVV--IDAYCGIGSISLFLAQKAK--KVYGIEVVPEAIEDAKM 349

Query: 140 NAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           NA  NG++       + + +   W    +GL  DVIV +PP
Sbjct: 350 NAEINGMNNVEFSVGQAEKVMPKW--KEQGLDPDVIVVDPP 388


>gi|116511952|ref|YP_809168.1| Type I restriction-modification system methyltransferase subunit
           [Lactococcus lactis subsp. cremoris SK11]
 gi|116107606|gb|ABJ72746.1| Type I restriction-modification system methyltransferase subunit
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 462

 Score = 42.4 bits (98), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 24/100 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNGV 146
           ++  R+ D   G+G++ L + KE P         FF   G +++     +A+ N + + V
Sbjct: 139 QEQFRVYDPAMGSGSLLLTVQKELPGGEREGSVEFF---GQELNTTTYNLARMNLMMHDV 195

Query: 147 S------ERFDTLQSDW-FSSVEGL-----FDVIVSNPPY 174
           +       R DTL +DW +   EG      FD +V+NPPY
Sbjct: 196 NYRNMNLRRADTLDADWPYDEKEGTQIPRKFDAVVANPPY 235


>gi|332291489|ref|YP_004430098.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169575|gb|AEE18830.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5]
          Length = 253

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 23/161 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L L + S       V++   A E A  N   +   +R     +   ++
Sbjct: 42  ILDIGTGTGVIALMLAQRSDAMTVDAVELDDSAYEQAADNFENSVWGDRLFCYHAHLYEF 101

Query: 158 FSSVEGLFDVIVSNPP-YIESV------------IVDCLGLEVRDFDPRISLDGGIDGLS 204
            + ++  +D+IV NPP Y+E++            I D   +E R+          ++   
Sbjct: 102 AAEIDDEYDLIVCNPPFYMETLNDESTALQRSRSIKDGAAIEARE-------QARLEESM 154

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            +  +   V++ L++DG  SV I + ++ D + +     LF
Sbjct: 155 PFELLVGAVAKLLSEDGAFSVIIPHEREDDFILLCSRAGLF 195


>gi|261197353|ref|XP_002625079.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           dermatitidis SLH14081]
 gi|239595709|gb|EEQ78290.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           dermatitidis SLH14081]
          Length = 379

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+        S++  +G ++ 
Sbjct: 147 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 205

Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181
                       RF+           + DWF + +G FD+++    +       E V+VD
Sbjct: 206 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 265

Query: 182 CLG 184
             G
Sbjct: 266 VGG 268


>gi|308231588|ref|ZP_07413001.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001]
 gi|308369432|ref|ZP_07417752.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002]
 gi|308370447|ref|ZP_07421523.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003]
 gi|308371706|ref|ZP_07425893.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004]
 gi|308372931|ref|ZP_07430423.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005]
 gi|308374042|ref|ZP_07434610.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006]
 gi|308375194|ref|ZP_07443044.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007]
 gi|308376441|ref|ZP_07438834.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008]
 gi|308377459|ref|ZP_07479236.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009]
 gi|308378671|ref|ZP_07483429.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010]
 gi|308379813|ref|ZP_07487662.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011]
 gi|308395844|ref|ZP_07492167.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012]
 gi|308216770|gb|EFO76169.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001]
 gi|308327629|gb|EFP16480.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002]
 gi|308331984|gb|EFP20835.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003]
 gi|308335771|gb|EFP24622.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004]
 gi|308339377|gb|EFP28228.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005]
 gi|308343253|gb|EFP32104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006]
 gi|308347145|gb|EFP35996.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007]
 gi|308351083|gb|EFP39934.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008]
 gi|308355719|gb|EFP44570.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009]
 gi|308359674|gb|EFP48525.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010]
 gi|308363579|gb|EFP52430.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011]
 gi|308367215|gb|EFP56066.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012]
 gi|323721034|gb|EGB30098.1| benzoquinone methyltransferase [Mycobacterium tuberculosis
           CDC1551A]
          Length = 225

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 13/98 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D+S  
Sbjct: 32  EPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERG--HTTVGLDLSPA 79

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           A+E+A+  A   G++   F+   +  F+  +G FD IV
Sbjct: 80  AVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV 117


>gi|118473287|ref|YP_886258.1| transferase [Mycobacterium smegmatis str. MC2 155]
 gi|118174574|gb|ABK75470.1| transferase [Mycobacterium smegmatis str. MC2 155]
          Length = 499

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 65/137 (47%), Gaps = 15/137 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG G   L L   S     V  D + +AL +A + A  NG+S  +D      F 
Sbjct: 162 RVLDLGTGCGIQALHLDAHSDHI--VATDTNARALALAAATARLNGMS--WDLRHGSLFE 217

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  FD+IVSNPP++       +G   RD+   I  D G+ G +  + + + V  HLN
Sbjct: 218 PVAGERFDLIVSNPPFV-------VGSGARDY---IYRDSGMAGDTVCQKLIEQVGDHLN 267

Query: 219 KDGLCSVEIGYNQKVDV 235
             G   +   +  K D 
Sbjct: 268 PGGTAHIMANWIVKRDT 284


>gi|238793780|ref|ZP_04637401.1| Methyltransferase small [Yersinia intermedia ATCC 29909]
 gi|238726844|gb|EEQ18377.1| Methyltransferase small [Yersinia intermedia ATCC 29909]
          Length = 259

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LD+G G+G + L + + S     + GV++  +A   A SNA  +  +ER    + D  
Sbjct: 61  KVLDIGCGSGLIALMIAQRSTSEVLIDGVELEPEAARQASSNAALSPWAERVCIYEQDVH 120

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    + 
Sbjct: 121 QFAENHSHQYDLIVSNPPYFAPAVA 145


>gi|330828265|ref|YP_004391217.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565]
 gi|328803401|gb|AEB48600.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565]
          Length = 236

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+LD+GTG+G + L L + S        V +DI+  A   A+ NA  +  ++R   ++S 
Sbjct: 41  RVLDIGTGSGLIALMLAQRSRSDCRLDAVELDIN--AASQARENAAASPWADRVTVIESA 98

Query: 157 WFSSVEGLFDVIVSNPPY 174
                   +D++VSNPPY
Sbjct: 99  IQDYQADPYDLVVSNPPY 116


>gi|325697040|gb|EGD38927.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK160]
 gi|328945608|gb|EGG39759.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1087]
          Length = 182

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LDL  G+G++ +  +        V V+   +A  I   N      SERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESERFDLLKMESGR 105

Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
              ++ G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEKRQLLSQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|115760358|ref|XP_001198852.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115949723|ref|XP_001184273.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 620

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)

Query: 89  SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG- 145
           S+P+IE+  +  +RILDLG G G   L   +  P    VG+D S +A+   K  A   G 
Sbjct: 423 SMPQIEEQMKSGIRILDLGCGRGLASLVFAENYPNSTVVGLDFSEEAINYGKERAKEKGL 482

Query: 146 -----VSERFDTLQSDWFSSVEGL--FDVI 168
                V E    +  DW ++++ +  FDVI
Sbjct: 483 TNVEFVCEDAACIPDDWNNTIDYIYTFDVI 512


>gi|108762169|ref|YP_629399.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK
           1622]
 gi|123248086|sp|Q1DD74|PRMA_MYXXD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|108466049|gb|ABF91234.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK
           1622]
          Length = 288

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 8/137 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGTG + +A  K+    + V  D    ++E+A+ N   NG  +    +     + 
Sbjct: 160 VLDVGTGTGVLAIA-AKKLGAGRTVATDNDPISVELAQENQAENGTPDI--EVSGKELTQ 216

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           VEG FD++++N   + + +++   L V     R+ L G    LSH R   +   R+L   
Sbjct: 217 VEGTFDLVLAN--ILANTLIELAPLIVAKTKDRLVLAG---VLSHQRADVEAAYRNLGLT 271

Query: 221 GLCSVEIGYNQKVDVVR 237
            L     G   ++D+ R
Sbjct: 272 VLTGATQGEWVRIDLQR 288


>gi|302556027|ref|ZP_07308369.1| methyltransferase [Streptomyces viridochromogenes DSM 40736]
 gi|302473645|gb|EFL36738.1| methyltransferase [Streptomyces viridochromogenes DSM 40736]
          Length = 217

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELL  +     LP         +LD+GTG     LAL      F    VD+S 
Sbjct: 10  YAPQEDTELLAGALFDEPLP-----TGAAVLDVGTG--TGALALEAARRGFDVTAVDVSR 62

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +A+  A+ NA   G+  R      + F  V G  FD+I++NPPY+ +
Sbjct: 63  RAVWAARLNAARAGLLVRIR--HGNLFDPVLGESFDLILANPPYVPA 107


>gi|170291018|ref|YP_001737834.1| methylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175098|gb|ACB08151.1| methylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 181

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G V + + K       V  DIS ++  +A  NA  NG+     T+Q D     
Sbjct: 33  LDLGTGSGIVAIEMAKRG--CCTVASDISPRSCLLASRNAELNGLE--VHTVQGDMTRHF 88

Query: 162 EGL-FDVIVSNPPYI 175
             L FD+I  NPPY+
Sbjct: 89  RDLAFDLIAFNPPYL 103


>gi|154488912|ref|ZP_02029761.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
           L2-32]
 gi|154083049|gb|EDN82094.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
           L2-32]
          Length = 214

 Score = 42.4 bits (98), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L  ESP      +D++ +ALE+ + NA  NG+      + ++   +V
Sbjct: 76  LDLGCGWGPIALTLGFESPKADIWALDVNERALELTRRNAELNGMG-NIHAVTAEQVPAV 134

Query: 162 EGLFDVIVSNPP 173
              FD+I SNPP
Sbjct: 135 L-TFDLIWSNPP 145


>gi|260911716|ref|ZP_05918292.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634141|gb|EEX52255.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 235

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 15/89 (16%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSER 149
            ILD+GTGTG + L L +     +  GV+++ +A   A+ N           + N   +R
Sbjct: 37  HILDIGTGTGLIALMLAQRCQDAEITGVELNEQAALQAEENVDASPFAHQITIENVPIQR 96

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           F +LQ     S+ G FD IVSNPP+  S+
Sbjct: 97  F-SLQ----PSLHGHFDSIVSNPPFYHSL 120


>gi|182412488|ref|YP_001817554.1| methyltransferase small [Opitutus terrae PB90-1]
 gi|177839702|gb|ACB73954.1| methyltransferase small [Opitutus terrae PB90-1]
          Length = 271

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 33/142 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D G+G G + +   K       +G+++    +  A+ NAV NGV+ER D L SD ++
Sbjct: 54  RGIDWGSGVGCLAIVAAKVPSVEFVLGLELYGPNVRTARDNAVCNGVAERTDFLCSDSYA 113

Query: 160 S-----------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                       + G  + I++NPP  E                      G DG    R 
Sbjct: 114 PRLPDDREKLELLAGRTEFILANPPSSE----------------------GDDGFEFRRI 151

Query: 209 IADGVSRHLNKDGLCSVEIGYN 230
           +  G  R+L   G   + I Y 
Sbjct: 152 VLRGARRYLVPGGAVLLNISYQ 173


>gi|239825614|ref|YP_002948238.1| methyltransferase small [Geobacillus sp. WCH70]
 gi|239805907|gb|ACS22972.1| methyltransferase small [Geobacillus sp. WCH70]
          Length = 249

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DL TG G + L LL      K +G++I  +  ++AK +   NG+ ++ + +  D   
Sbjct: 48  QIVDLCTGNGVIPL-LLSMRTKGKIIGIEIQERLCDMAKRSVQYNGLEKQIEIIHGDIKD 106

Query: 160 SVEGL----FDVIVSNPPYIESV 178
           + + L    +DV+  NPPY  ++
Sbjct: 107 APKQLGYSKYDVVTCNPPYFPTI 129


>gi|54025744|ref|YP_119986.1| hypothetical protein nfa37740 [Nocardia farcinica IFM 10152]
 gi|54017252|dbj|BAD58622.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 523

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V  +LDLGTG G    A+   S      G D++ +AL +A++ A  N +    + +  
Sbjct: 177 RRVGSVLDLGTGCG--VQAVHAASYADHVTGTDVNPRALWLAEATAALNELD--IELVAG 232

Query: 156 DWFSSVEGL-FDVIVSNPPYI 175
            WF  V G  FD +V+NPP++
Sbjct: 233 SWFEPVVGRRFDQVVANPPFV 253


>gi|289551659|ref|YP_003472563.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181190|gb|ADC88435.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 202

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
             IV S +H+ +  +     F   ++   SD         LL+ + L    P   K    
Sbjct: 16  QTIVYSYQHDKLQLVTDAGVFSKDKVDFGSD---------LLIQTFLNEHPPGPSKS--- 63

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I+D+G G G + L + K  P  K   +D++ +AL +A+ N+  N + +     +SD  S
Sbjct: 64  -IVDVGCGYGPIGLTIAKVCPHHKVTMLDVNQRALALAEKNSKHNQI-DNVIIKESDGLS 121

Query: 160 SVE-GLFDVIVSNPP 173
           +V+    D I++NPP
Sbjct: 122 AVKHNACDYILTNPP 136


>gi|126664959|ref|ZP_01735942.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17]
 gi|126630329|gb|EBA00944.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17]
          Length = 419

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G G + LA L  +   +    D+S +A+  A +NA        F    +D  +
Sbjct: 280 QVLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAATNAAREFPQSAFSFRHADSIA 339

Query: 160 SVEGLFDVIVSNPPYIESVIV 180
           +  G FD+I+ NPP+ E  +V
Sbjct: 340 ADGGEFDLILLNPPFHEGGVV 360


>gi|71282296|ref|YP_267461.1| ribosomal RNA small subunit methyltransferase D [Colwellia
           psychrerythraea 34H]
 gi|123633824|sp|Q488Q3|RLMG_COLP3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|71148036|gb|AAZ28509.1| ribosomal RNA small subunit methyltransferase D [Colwellia
           psychrerythraea 34H]
          Length = 392

 Score = 42.4 bits (98), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 6/115 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GV 146
           +LP +     V  +DLG G G + L +L   P      +D S  A+  AK N +TN   V
Sbjct: 240 NLPTVAANSTV--IDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDV 297

Query: 147 SERFDTLQSDWFSSVE-GLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGG 199
            E+ +   +D  + +E G  D+I+ NPP+ + +   D +  ++     R+   GG
Sbjct: 298 IEQCEFTLNDSLTDIEGGSVDLILCNPPFHQNTATTDHIAWQMFKDSHRVLKKGG 352


>gi|325967647|ref|YP_004243839.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
 gi|323706850|gb|ADY00337.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
          Length = 214

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 7/78 (8%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDLG GTG  A+  AL+      + + +DI  +AL IA+ +A   G+S   D + +D 
Sbjct: 59  RVLDLGCGTGRFAIAAALMGVR---QVICIDIDPEALAIARESASKYGLSN-VDFITNDI 114

Query: 158 FS-SVEGLFDVIVSNPPY 174
            + ++ G FDV+  NPP+
Sbjct: 115 RNMAIMGRFDVVFQNPPF 132


>gi|290508240|ref|ZP_06547611.1| O-methyltransferase [Klebsiella sp. 1_1_55]
 gi|289777634|gb|EFD85631.1| O-methyltransferase [Klebsiella sp. 1_1_55]
          Length = 245

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 16/88 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150
           V  +LD+G G+G + L L + +      G D+   A+E+       A+ NA+ +  S R 
Sbjct: 45  VKHVLDIGAGSGLLALMLAQRT------GHDVQVDAVELDEEAAAQARENALASPWSSRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175
           +  Q+D   W  S    +++I+SNPP+ 
Sbjct: 99  EICQADIHQWQPSQTRRYELIISNPPFF 126


>gi|217967343|ref|YP_002352849.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
           6724]
 gi|226710074|sp|B8E1A7|PRMA_DICTD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|217336442|gb|ACK42235.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
           6724]
          Length = 299

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + + K+    K  GVDI  KA+E+AK NA  N V   F   ++D    
Sbjct: 167 VLDVGTGSGILSI-VAKKLGGDKVKGVDIDEKAIEVAKKNAEGNHVEVEFQ--KNDLIDG 223

Query: 161 VEGLFDVIVSN 171
           +   +D++V+N
Sbjct: 224 INEKYDIVVAN 234


>gi|90413380|ref|ZP_01221373.1| ribosomal protein L11 methyltransferase [Photobacterium profundum
           3TCK]
 gi|90325622|gb|EAS42091.1| ribosomal protein L11 methyltransferase [Photobacterium profundum
           3TCK]
          Length = 294

 Score = 42.4 bits (98), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  ++ +D+    I+D G G+G + +A LK   
Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGQTIIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             K +G+DI  +A++ ++ NA  NGVS++ +  L  D  + V+   DV+V+N
Sbjct: 182 AKKVIGIDIDPQAIQASRDNAERNGVSDKLELFLPKDQPTDVQA--DVVVAN 231


>gi|88602617|ref|YP_502795.1| O-methyltransferase family protein [Methanospirillum hungatei JF-1]
 gi|88188079|gb|ABD41076.1| O-methyltransferase, family 2 [Methanospirillum hungatei JF-1]
          Length = 339

 Score = 42.4 bits (98), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I+  R+F  ++ T  S  ++     +++V   L  SLP  E     R+LDLG G G + +
Sbjct: 130 IMSSREFQEMQ-TRGSINYQRSGMAQIVV--KLISSLP--EYNGFSRMLDLGCGPGLLGI 184

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171
           AL+ + P   GV  D    A E+A+  A   GVS+R   +  D+ + S+   +D+I+++
Sbjct: 185 ALILDHPTMNGVLFDQPPVA-EVARRCAAEYGVSDRVTVMSGDYLNDSIGEEYDLILAS 242


>gi|89055180|ref|YP_510631.1| SAM-dependent methyltransferase [Jannaschia sp. CCS1]
 gi|88864729|gb|ABD55606.1| SAM-dependent methyltransferase [Jannaschia sp. CCS1]
          Length = 398

 Score = 42.4 bits (98), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  AL++A   A   G +ERF T Q D F+ +E L      FD+++++PP
Sbjct: 253 VDASDPALQLAGQGAKAMGCAERFATRQGDAFAVMEALAAEGETFDIVIADPP 305


>gi|319951337|ref|ZP_08025167.1| putative RNA methyltransferase [Dietzia cinnamea P4]
 gi|319435000|gb|EFV90290.1| putative RNA methyltransferase [Dietzia cinnamea P4]
          Length = 422

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFS 159
           + D+GTGTG V  A+L        V  DI+ +A++ A+ N    G+ +R   ++ D W  
Sbjct: 228 VWDIGTGTG-VLAAVLARRGARAVVASDINPRAVQCARGNVRRLGLEDRVTVVRGDLWPG 286

Query: 160 SVEGLF------DVIVSNPPYIESVIVDCLGLEVRDFD 191
             +G+       DV+V NPP+I       L   + D D
Sbjct: 287 DDDGVVNRSGRADVVVCNPPWIPGRPTSALEQGIYDPD 324


>gi|294155919|ref|YP_003560303.1| type I restriction-modification system, methyltransferase
           [Mycoplasma crocodyli MP145]
 gi|291600214|gb|ADE19710.1| type I restriction-modification system, methyltransferase
           [Mycoplasma crocodyli MP145]
          Length = 523

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 10/109 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDI 129
           F P+  ++ L +  L +       +D+  + D   G+G++ L   K   +P+    G + 
Sbjct: 207 FTPQEVSKFLANVTLVYK----NSKDIYSVYDPTCGSGSLLLKFKKILNNPYLHFSGQES 262

Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWFSS---VEGLFDVIVSNPPY 174
           +     ++K N + +GV  ++ D    D  +    +E  FDV+VSNPPY
Sbjct: 263 NPTTFSLSKMNLIIHGVEFDKIDLKCGDTLNDPLHLEKKFDVVVSNPPY 311


>gi|91226789|ref|ZP_01261442.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01]
 gi|91188920|gb|EAS75204.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01]
          Length = 239

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++  +  +ILD+GTGTG + L   +     +   VDI   A+  A+ N   +  S+R   
Sbjct: 38  VQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWSDRVSV 97

Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIES 177
             +D    +    F  I+ NPPY  S
Sbjct: 98  HHTDILHFTPTHPFQRIICNPPYFNS 123


>gi|15894164|ref|NP_347513.1| cyclopropane fatty acid synthase [Clostridium acetobutylicum ATCC
           824]
 gi|15023773|gb|AAK78853.1|AE007603_4 Cyclopropane fatty acid synthase [Clostridium acetobutylicum ATCC
           824]
 gi|325508292|gb|ADZ19928.1| Cyclopropane fatty acid synthase [Clostridium acetobutylicum EA
           2018]
          Length = 391

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 7/138 (5%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRL----TLSSDTFE-PRPETELLVDSALAFSLPR 92
           L N I +S K    H  +G  DFY + L    T S   F+ P    E    + +   L +
Sbjct: 103 LPNTIRKSKKDIKFHYDIG-NDFYKLWLDKTMTYSCGYFKSPNDSLEQAQKNKVEHILKK 161

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  +  V +LD+G G G + +   KE    K +GV +S +  ++ K      G+  R D 
Sbjct: 162 LSLKKDVTLLDIGCGWGELIITAAKEYGV-KALGVTLSEEQFKVVKERVKKEGLEGRVDV 220

Query: 153 LQSDWFSSVEGLFDVIVS 170
           +  D+       FD +VS
Sbjct: 221 ILEDYREIKNRTFDRVVS 238


>gi|261820511|ref|YP_003258617.1| methyltransferase small [Pectobacterium wasabiae WPP163]
 gi|261604524|gb|ACX87010.1| methyltransferase small [Pectobacterium wasabiae WPP163]
          Length = 248

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           RILD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R      D  
Sbjct: 50  RILDIGSGSGLLALMLAQRSEPHVRVDAVELDSAASQQAKENMAASPWADRVTVYAEDIV 109

Query: 158 -FSSVEGL-FDVIVSNPPY 174
            F+++    + +IVSNPPY
Sbjct: 110 DFAAMRSTDYSLIVSNPPY 128


>gi|152971431|ref|YP_001336540.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|262040310|ref|ZP_06013561.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330007679|ref|ZP_08306018.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3]
 gi|262828519|sp|A6TCI9|TRMN6_KLEP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|150956280|gb|ABR78310.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|259042419|gb|EEW43439.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328535360|gb|EGF61842.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3]
          Length = 245

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 16/88 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNGVSERF 150
           V  +LD+G G+G + L L + +      G D+  +A+E+       A+ NA+ +  + R 
Sbjct: 45  VKHVLDIGAGSGLLALMLAQRT------GDDVHVEAVELDEEAAAQARENALASPWASRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI 175
           +  Q+D   W  S    +++I+SNPP+ 
Sbjct: 99  EVWQADIHQWQPSQTRRYELIISNPPFF 126


>gi|254291901|ref|ZP_04962683.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422187|gb|EDN14152.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 240

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPQAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSKR--FAAIICNPPYFNS 123


>gi|78101439|pdb|2AS0|A Chain A, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna
           Methyltransferase
 gi|78101440|pdb|2AS0|B Chain B, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna
           Methyltransferase
          Length = 396

 Score = 42.4 bits (98), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ T TG  A+  A+         +G+D S +A+E AK NA  NGV +R   +    
Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IGIDKSPRAIETAKENAKLNGVEDRXKFIVGSA 276

Query: 158 FSSVEGL------FDVIVSNPP 173
           F   E L      FD++V +PP
Sbjct: 277 FEEXEKLQKKGEKFDIVVLDPP 298


>gi|327354985|gb|EGE83842.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 379

 Score = 42.4 bits (98), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+        S++  +G ++ 
Sbjct: 147 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 205

Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181
                       RF+           + DWF + +G FD+++    +       E V+VD
Sbjct: 206 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 265

Query: 182 CLG 184
             G
Sbjct: 266 VGG 268


>gi|34762348|ref|ZP_00143351.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27888002|gb|EAA25066.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 223

 Score = 42.4 bits (98), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 56/99 (56%), Gaps = 8/99 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    +G+DI  + ++ A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELIGIDIQKENIDRANM 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
               N + +  +F+ +    + +    FDVI+SNPPY++
Sbjct: 87  ALELNKIEKNIQFECMDIREYKN-SNYFDVIISNPPYMD 124


>gi|326336150|ref|ZP_08202322.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691659|gb|EGD33626.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 234

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           RILD+G GTG + L + +  P      ++I+ +A +  + N   +   +R    Q D   
Sbjct: 36  RILDIGAGTGILSLMMAQRFPTACIHAIEITPEATQECRENISLSPWKDRISVYQEDIRI 95

Query: 158 FSSVEG-LFDVIVSNPPY 174
           FS V+   +D+I+SNPP+
Sbjct: 96  FSKVDKHKYDLIISNPPF 113


>gi|291533514|emb|CBL06627.1| Predicted O-methyltransferase [Megamonas hypermegale ART12/1]
          Length = 251

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   + LDLGTGTG + L L   +   K   ++I+    EIAK N V N + ++    + 
Sbjct: 48  RKNAKGLDLGTGTGVIPLLLSNRA--MKMDALEINPVTCEIAKRNMVMNKLQDKICVQEG 105

Query: 156 DWFSSVEGL----FDVIVSNPPY 174
           D     E       D +VSNPPY
Sbjct: 106 DLCKIKEYYKPQSMDFVVSNPPY 128


>gi|262831286|sp|Q57L59|TRMN6_SALCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 263

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 44  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 102

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 103 DDIQRWAPRQTVRFDLIISNPPYYE 127


>gi|255525760|ref|ZP_05392691.1| type I restriction-modification system, M subunit [Clostridium
           carboxidivorans P7]
 gi|255510583|gb|EET86892.1| type I restriction-modification system, M subunit [Clostridium
           carboxidivorans P7]
          Length = 412

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%)

Query: 93  IEKRD-VVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS- 147
           +EK D    + D   G+G++ L + +E P     K  G +++     +A+ N + + VS 
Sbjct: 104 VEKSDEFFNLYDPTMGSGSLLLTVGQELPKGTPMKYFGQELNTTTYNLARMNLMMHDVSY 163

Query: 148 -----ERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                   DTL+SDW    +G        FD +V+NPPY      D   L+    DPR S
Sbjct: 164 NNMVLNNADTLESDWPDGPDGKGIDHPRSFDAVVANPPYSAKWDNDETKLK----DPRFS 219

Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225
             G +   S   Y  I   +  HLN  G  ++
Sbjct: 220 DYGKLAPASKADYAFILHSI-YHLNNTGTMAI 250


>gi|254413150|ref|ZP_05026922.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
 gi|196180314|gb|EDX75306.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   +   R  +RILD G GTG     L+  +P    VG+D+S  AL++A+     
Sbjct: 33  AAYSFCTGQKPSRQDIRILDAGCGTGVGTEYLVHLNPQAAVVGIDLSAGALQVAQERCHR 92

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168
           +G +   F  L       +EG FD+I
Sbjct: 93  SGANRVEFHHLSLYDAQELEGEFDLI 118


>gi|229917426|ref|YP_002886072.1| methyltransferase small [Exiguobacterium sp. AT1b]
 gi|229468855|gb|ACQ70627.1| methyltransferase small [Exiguobacterium sp. AT1b]
          Length = 245

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVV-------RILDLGTGTGAVCLALLKESPFFKGV-- 125
           RP   +  D   +FSL  +   + V       +++DL  GTGA+ L L   S   KG   
Sbjct: 16  RPGKIIQSDDVFSFSLDAVLLAEFVWVPIQKGQLVDLCAGTGAIPLFL---SYRTKGTIT 72

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
           GV+I  K +++A  +   N + ER   ++ D  ++   L    +DVI  NPPY
Sbjct: 73  GVEIQSKLVDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPY 125


>gi|295399245|ref|ZP_06809227.1| Methyltransferase type 12 [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294978711|gb|EFG54307.1| Methyltransferase type 12 [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 247

 Score = 42.0 bits (97), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P  + +L V       L +  ++   RILD+G GTG + + L KE   F   GVD+S   
Sbjct: 18  PYEQWQLFVQK----KLKQYGRKGAKRILDIGCGTGELAIRLAKEG--FLVTGVDLSENM 71

Query: 134 LEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
           L IA++ A T  V+  F   +  + + FSSV+
Sbjct: 72  LAIAQAKAETQHVAIEFFQQNMTEIEGFSSVD 103


>gi|256027339|ref|ZP_05441173.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           D11]
 gi|289765308|ref|ZP_06524686.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11]
 gi|289716863|gb|EFD80875.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11]
          Length = 213

 Score = 42.0 bits (97), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)

Query: 83  DSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKS 139
           D+ L F L    + K+++ ++LD+GTG G + + LL ++ F    VG+DI  + ++ A  
Sbjct: 29  DTILLFKLFQASLNKKNI-KLLDIGTGNGILPI-LLSDNEFLSELVGIDIQKENIDRANE 86

Query: 140 NAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
               N + +  +F+ +    +      FDVI+SNPPY++
Sbjct: 87  ALQLNKIEKNIQFECIDIREYRK-SNYFDVIISNPPYMD 124


>gi|167647339|ref|YP_001685002.1| methyltransferase small [Caulobacter sp. K31]
 gi|167349769|gb|ABZ72504.1| methyltransferase small [Caulobacter sp. K31]
          Length = 245

 Score = 42.0 bits (97), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+++ G G G   LA        + VG++    A ++A+ N   NG+++R + +  D   
Sbjct: 42  RVIEAGCGVGGALLAAASRRKGARFVGLERDPAAADLARGNIALNGLADRVEVVTGDIER 101

Query: 160 SVEGL----FDVIVSNPPYIE 176
               L    FD ++SNPP+ +
Sbjct: 102 GFRALDLPVFDAVISNPPFFD 122


>gi|321225997|gb|EFX51050.1| putative O-methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 268

 Score = 42.0 bits (97), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 67  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 125

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 126 DDIQRWAPRQTVRFDLIISNPPYYE 150


>gi|75676552|ref|YP_318973.1| ribosomal L11 methyltransferase [Nitrobacter winogradskyi Nb-255]
 gi|74421422|gb|ABA05621.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 321

 Score = 42.0 bits (97), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138
           LL+D  L   +PR       R+LDLG GTG + +A  K     + V   DI  ++  +A+
Sbjct: 169 LLLDHVLRARMPR-------RVLDLGAGTGVLAIAAAKA--LHRSVLASDIDPRSATVAR 219

Query: 139 SNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171
            NA  NGV     ++++  FS+        FD++++N
Sbjct: 220 ENATLNGVGSLVWSIRATGFSAPLFRARAPFDLVLAN 256


>gi|326693027|ref|ZP_08230032.1| RNA methyltransferase [Leuconostoc argentinum KCTC 3773]
          Length = 254

 Score = 42.0 bits (97), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 23/123 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+  + D F         +D+ L      ++ +     +DLG GTGAV L     +P 
Sbjct: 19  NIRIIQNPDMFA------YSLDAILLAYFAGVKGKGSGLTVDLGAGTGAVGLFY---APK 69

Query: 122 FKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI--------VSN 171
             G    V+I  +  E+A+ + V NG+ +R   +Q+D    ++ +FDVI        +SN
Sbjct: 70  VTGPITLVEIQPELAEMAQRSVVLNGLQDRVSVVQAD----MKAIFDVIQPGSAETVLSN 125

Query: 172 PPY 174
           PPY
Sbjct: 126 PPY 128


>gi|301325561|ref|ZP_07219029.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
 gi|300847612|gb|EFK75372.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
          Length = 378

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL+++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|229530467|ref|ZP_04419855.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)]
 gi|229332240|gb|EEN97728.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)]
 gi|327483460|gb|AEA77867.1| Predicted O-methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 240

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHTDILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 LPSKR--FAAIICNPPYFNS 123


>gi|227327928|ref|ZP_03831952.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 295

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS      G  GLS    T ADGV+ 
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISDLPKASGHLGLSGVLATQADGVAE 268


>gi|167553273|ref|ZP_02347023.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205322239|gb|EDZ10078.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 378

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157
           +I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++ 
Sbjct: 231 KIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
            S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 291 LSGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|161612639|ref|YP_001586604.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362003|gb|ABX65771.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 268

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 67  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 125

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 126 DDIQRWAPRQTVRFDLIISNPPYYE 150


>gi|189346615|ref|YP_001943144.1| hypothetical protein Clim_1096 [Chlorobium limicola DSM 245]
 gi|189340762|gb|ACD90165.1| Protein of unknown function methylase putative [Chlorobium limicola
           DSM 245]
          Length = 393

 Score = 42.0 bits (97), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 15/110 (13%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E +L       F L + E R ++R       +LD+ T  G   L  L+       + VDI
Sbjct: 191 EVDLYEGQKTGFFLDQRENRKIIRSFSEGADVLDVFTNDGGFALNALRGGAR-SAIMVDI 249

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVEGLFDVIVSNPP 173
           S + L+ A+ NAV NG  E F  + SD F         + LFDV+V +PP
Sbjct: 250 SEETLKRAEKNAVLNGF-ENFSLVASDAFDMLGKMVEAKELFDVVVLDPP 298


>gi|239944962|ref|ZP_04696899.1| hypothetical protein SrosN15_28500 [Streptomyces roseosporus NRRL
           15998]
 gi|239991426|ref|ZP_04712090.1| hypothetical protein SrosN1_29252 [Streptomyces roseosporus NRRL
           11379]
 gi|291448423|ref|ZP_06587813.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291351370|gb|EFE78274.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 502

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 31/50 (62%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +  ALLK+  F + VGVD+S +AL IA      + + ER
Sbjct: 301 RVLDLGCGQGQLVQALLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 350


>gi|52424258|ref|YP_087395.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
 gi|81825597|sp|Q65W50|TRMN6_MANSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|52306310|gb|AAU36810.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 242

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           R LDLGTG+G + L L + +     + GV+I   A   A  N   +  +++    Q    
Sbjct: 47  RYLDLGTGSGLIALMLAQRTQTDCHITGVEIDPSAYRQATENVRQSPWADKIQLEQQNIV 106

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDC 182
           D+  +    FD ++SNPPY E   VDC
Sbjct: 107 DFTRTCTKKFDTVLSNPPYFEQG-VDC 132


>gi|322834136|ref|YP_004214163.1| methyltransferase small [Rahnella sp. Y9602]
 gi|321169337|gb|ADW75036.1| methyltransferase small [Rahnella sp. Y9602]
          Length = 248

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           R+LD+G G+G + + L + S     +  V++   A   A+ N + +  ++R      D  
Sbjct: 50  RVLDIGCGSGLIAMMLAQRSNAQTVIDAVELEPSAAAQAEENFLNSVWAQRLAVYAQDIN 109

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180
            +    +  +D+IVSNPPY ES + 
Sbjct: 110 AYAGEHQAEYDLIVSNPPYFESAVA 134


>gi|262831180|sp|Q7MNQ4|TRMN6_VIBVY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 239

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   +         VDI   A+E A+ N   +    R      D    
Sbjct: 46  LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 105

Query: 160 SVEGLFDVIVSNPPYIES 177
           +    FD I+ NPPY  S
Sbjct: 106 NFTHRFDGIICNPPYFNS 123


>gi|239606703|gb|EEQ83690.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           dermatitidis ER-3]
          Length = 373

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 40/123 (32%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK--------SNAVTNGVSE- 148
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+        S++  +G ++ 
Sbjct: 141 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELARRLHHHRHDSSSTRDGGADT 199

Query: 149 ------------RFDTL---------QSDWFSSVEGLFDVIVSNPPY------IESVIVD 181
                       RF+           + DWF + +G FD+++    +       E V+VD
Sbjct: 200 AARTTTSGTPAIRFEVWDVFDKRAVEELDWFPAAQGGFDIVLDKGTFDAISLSAEEVVVD 259

Query: 182 CLG 184
             G
Sbjct: 260 VGG 262


>gi|113953886|ref|YP_731517.1| methyltransferase [Synechococcus sp. CC9311]
 gi|113881237|gb|ABI46195.1| possible methyltransferase [Synechococcus sp. CC9311]
          Length = 406

 Score = 42.0 bits (97), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 83  DSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           DS LA     +E RD     +RILD G GTG     L   +P  + + VDIS  AL++A+
Sbjct: 42  DSVLAVVRGGLESRDSNLGPIRILDAGCGTGVSTDYLCHLNPGAEILAVDISAGALDVAR 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
                +G +E+  +L+ +  S +    EG FD I S
Sbjct: 102 ERLRRSGGAEQVRSLRQEQRSLLDLDDEGCFDYINS 137


>gi|260434959|ref|ZP_05788929.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109]
 gi|260412833|gb|EEX06129.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109]
          Length = 389

 Score = 42.0 bits (97), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +  RILD G GTG     L   +P    +GVDIS  AL +A+     +G +E+  +L+
Sbjct: 56  KMEAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCQRSGAAEQVASLR 115

Query: 155 SDWFS----SVEGLFDVIVS 170
            +  S    S EG FD I S
Sbjct: 116 QEQRSLLDLSDEGSFDYINS 135


>gi|269122208|ref|YP_003310385.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268616086|gb|ACZ10454.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 201

 Score = 42.0 bits (97), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSD 156
           + LD+G G G V +       F  G+ +   D++ +ALE+A+ N   N ++E ++ ++S 
Sbjct: 62  KFLDIGCGYGPVGII---AKSFVPGLDISLSDVNERALELAEKNIKLNNITE-YNIIKSY 117

Query: 157 WFSSVEGLFDVIVSNPP 173
            F ++   FD I+SNPP
Sbjct: 118 IFDNIHENFDCILSNPP 134


>gi|76802473|ref|YP_327481.1| protein methyltransferase [Natronomonas pharaonis DSM 2160]
 gi|76558338|emb|CAI49928.1| protein methyltransferase [Natronomonas pharaonis DSM 2160]
          Length = 191

 Score = 42.0 bits (97), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 28/180 (15%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  ++ LL D+A       +E+ D    L++G G G V  A +  +   + VG DI+ 
Sbjct: 13  YEPAEDSRLLADTA-------VERVDGGVALEVGVGFGYVA-AQVASATETRVVGCDINP 64

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A   A+   +    S   D   +D F       DV++ NPPY+ +        E    D
Sbjct: 65  EACVRAREAGIETVRSNLTDPFAADSF-------DVVLFNPPYLPT------PPEEEWDD 111

Query: 192 P-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRI-----FESRKL 244
           P   +L GG DG    R   D + R L   G C + +     +D VV++     FESR++
Sbjct: 112 PLEHALSGGEDGRRVIRPFLDDLGRVLRPAGRCLLLVSSLTDIDAVVKLAADAGFESREV 171


>gi|302038102|ref|YP_003798424.1| methyltransferase, ubiE family [Candidatus Nitrospira defluvii]
 gi|300606166|emb|CBK42499.1| Methyltransferase, ubiE family [Candidatus Nitrospira defluvii]
          Length = 273

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R++     R+LD+G G+G   LALL      +  GVDI+   +E A++ A   GV+ RF 
Sbjct: 43  RLQIAPGSRLLDVGCGSGQ--LALLAAKDGVEVTGVDIAANWVERAQARARAEGVNARFK 100

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
              ++        FDVIVS    + +   D +  E+     R+   GG  G++++   A+
Sbjct: 101 VADAEALPFEAASFDVIVSLIGAMFAPRPDLVAKELL----RVCTPGGTIGMANW--TAE 154

Query: 212 GVSRHLNKD 220
           G    + K+
Sbjct: 155 GFVGQMFKN 163


>gi|26991803|ref|NP_747228.1| hypothetical protein PP_5127 [Pseudomonas putida KT2440]
 gi|24986915|gb|AAN70692.1|AE016712_10 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 398

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+SE+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R LNKDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343


>gi|161936282|ref|YP_131495.2| ribosomal protein L11 methyltransferase [Photobacterium profundum
           SS9]
 gi|60390454|sp|Q6LLY5|PRMA_PHOPR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
          Length = 294

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P    +L+D  LAF           L  ++ +D+V   I+D G G+G + +A LK   
Sbjct: 123 PEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             K +G+DI  +A++ ++ NA  NGVS++    L  D  + V+   DV+V+N
Sbjct: 182 AEKVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQDQPTDVQA--DVVVAN 231


>gi|315179302|gb|ADT86216.1| hypothetical ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +D    F LP +     +  ++DLG G G + + + + +P      VD S  A+E A+ N
Sbjct: 214 LDQGTRFLLPHLPSDSTLNHVIDLGCGNGVLSVRMGQLNPQVNITCVDESFMAVESARQN 273

Query: 141 AVTNGVSER-FDTLQSDWFSSVEGLF-DVIVSNPPY-IESVIVDCLGLEV 187
            VTN   ER  + + ++     E    D++V NPP+  +  I D +  ++
Sbjct: 274 LVTNLGQERNIECIANNCLDGFEAAHTDMVVCNPPFHQQQAITDHIAWQM 323


>gi|153802010|ref|ZP_01956596.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122469|gb|EAY41212.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 240

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 LPSKR--FAAIICNPPYFNS 123


>gi|104779566|ref|YP_606064.1| hypothetical protein PSEEN0284 [Pseudomonas entomophila L48]
 gi|95108553|emb|CAK13247.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 398

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+SE+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R LNKDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343


>gi|320157376|ref|YP_004189755.1| putative O-methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|319932687|gb|ADV87551.1| predicted O-methyltransferase [Vibrio vulnificus MO6-24/O]
          Length = 239

 Score = 42.0 bits (97), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   +         VDI   A+E A+ N   +    R      D    
Sbjct: 46  LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 105

Query: 160 SVEGLFDVIVSNPPYIES 177
           +    FD I+ NPPY  S
Sbjct: 106 NFTHRFDGIICNPPYFNS 123


>gi|54307732|ref|YP_128752.1| hypothetical protein PBPRA0527 [Photobacterium profundum SS9]
 gi|81828856|sp|Q6LUS5|RSMC_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|46912155|emb|CAG18950.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           SS9]
          Length = 339

 Score = 42.0 bits (97), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +  + P  +    DIS  A+E AK     N +  +F    +D +S
Sbjct: 202 KVLDFGCGAGVLGAIMKAKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYS 259

Query: 160 SVEGLFDVIVSNPPY 174
            ++G ++ ++SNPP+
Sbjct: 260 ELKGPYNYLISNPPF 274


>gi|302391393|ref|YP_003827213.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum
           DSM 5501]
 gi|302203470|gb|ADL12148.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum
           DSM 5501]
          Length = 290

 Score = 42.0 bits (97), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 22/117 (18%)

Query: 72  FEPRPETELL-VDSALAFS----------LPRIEK--RDVVRILDLGTGTGAVCLALLKE 118
           ++P+PE +++ +D  +AF           L  IE+       +LD+GTGTG + +     
Sbjct: 115 YQPKPEEKVIEIDPGMAFGTGSHVTTTMCLEAIEEYSSQYSDLLDIGTGTGILSIG---- 170

Query: 119 SPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             +  G+     +DI   A+ IAK N   NG+S+     Q +    V+  + ++V+N
Sbjct: 171 -AYLLGIEDITAIDIDETAVRIAKENLKLNGISQGVKVEQGNLAEEVDNSYGLVVAN 226


>gi|161507538|ref|YP_001577492.1| Type I restriction-modification system modification subunit
           [Lactobacillus helveticus DPC 4571]
 gi|160348527|gb|ABX27201.1| Type I restriction-modification system modification subunit
           [Lactobacillus helveticus DPC 4571]
          Length = 551

 Score = 42.0 bits (97), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 13/89 (14%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKG-------VGVDISCKALEIAKSNAVTNGVSE--- 148
           + + D   G+G++ L   K      G        G +I+     +A+ N + +GV     
Sbjct: 233 MTVYDPAMGSGSLLLKFKKYIKLANGQADKIFYYGQEINMSTYNLARMNMILHGVDSSNQ 292

Query: 149 ---RFDTLQSDWFSSVEGLFDVIVSNPPY 174
              R DTL  DW    + +FD +V NPPY
Sbjct: 293 ELRRGDTLDEDWPPVSKTMFDAVVMNPPY 321


>gi|78224576|ref|YP_386323.1| 50S ribosomal protein L11P methyltransferase [Geobacter
           metallireducens GS-15]
 gi|123570746|sp|Q39Q76|PRMA_GEOMG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|78195831|gb|ABB33598.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 299

 Score = 42.0 bits (97), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 25/148 (16%)

Query: 43  VRSLKHESIHRILGWRDFYNV----RLTLSSDTFEP-RPETELLV---DSALAFS----- 89
           V +L+ E      GWR  +      R  +   T+EP  PE   LV   D  +AF      
Sbjct: 93  VTTLREEDWAT--GWRQHFAPTRIGRKLVIKPTWEPFSPEPGDLVIELDPGMAFGTGTHP 150

Query: 90  -----LPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                L  +EK      +LD+GTG+G + +A +K     + VG DI   A+ +A+ N   
Sbjct: 151 TTRLCLEALEKLGTAGDVLDVGTGSGILAMAAVKLG-AQRVVGTDIDPDAVAVARENCAM 209

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           NGV+    T      + + G F V+++N
Sbjct: 210 NGVTAELVTTP---LADIPGQFSVVLAN 234


>gi|312115779|ref|YP_004013375.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220908|gb|ADP72276.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 291

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTN 144
            +L R+    V R+LDLGTG+G + +   K     P    V VD+   A+E+A+ N   N
Sbjct: 138 LALERLSPVGVDRVLDLGTGSGVLAIGAAKALGHGPHI--VAVDVDPIAVEVARENVRMN 195

Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSN 171
           G          D +   +      FDVIV+N
Sbjct: 196 GAGADIALFTGDGYKPRDAYALAPFDVIVAN 226


>gi|254510350|ref|ZP_05122417.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11]
 gi|221534061|gb|EEE37049.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11]
          Length = 400

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA+L      + + VD S  ALE+A   A  +G ++RF T Q D F
Sbjct: 228 ARVLDVFSHVGGFGLAMLAGG-AAQALAVDGSAAALELATKGAAASGYADRFQTRQGDAF 286

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      FDV++ +PP
Sbjct: 287 DMLTQLGQEAATFDVVICDPP 307


>gi|253756219|ref|YP_003029359.1| type I restriction-modification system M protein [Streptococcus
           suis BM407]
 gi|251818683|emb|CAZ56518.1| type I restriction-modification system M protein [Streptococcus
           suis BM407]
          Length = 529

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%)

Query: 93  IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSN------AV 142
           +EK D    + D   G+G++ L +  E P     K  G +++     +A+ N        
Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVGY 280

Query: 143 TNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174
           +N +    DTL+SDW   V+ L       FD +V+NPPY
Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319


>gi|153009089|ref|YP_001370304.1| ribosomal protein L11 methyltransferase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560977|gb|ABS14475.1| ribosomal L11 methyltransferase [Ochrobactrum anthropi ATCC 49188]
          Length = 298

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160
           LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NGV+E   T  ++ F   
Sbjct: 164 LDLGTGSAVLAIAIAKLAP-IPVLATDIDPVAVTVAAENAAKNGVAEHIVTATAEGFGHP 222

Query: 161 ---VEGLFDVIVSN 171
                  FD+IV+N
Sbjct: 223 IFRSYSPFDLIVAN 236


>gi|37678845|ref|NP_933454.1| O-methyltransferase [Vibrio vulnificus YJ016]
 gi|37197586|dbj|BAC93425.1| predicted O-methyltransferase [Vibrio vulnificus YJ016]
          Length = 253

 Score = 42.0 bits (97), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   +         VDI   A+E A+ N   +    R      D    
Sbjct: 60  LLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLHLQHGDVLKL 119

Query: 160 SVEGLFDVIVSNPPYIES 177
           +    FD I+ NPPY  S
Sbjct: 120 NFTHRFDGIICNPPYFNS 137


>gi|239943101|ref|ZP_04695038.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239989559|ref|ZP_04710223.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291446578|ref|ZP_06585968.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL
           15998]
 gi|291349525|gb|EFE76429.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL
           15998]
          Length = 511

 Score = 42.0 bits (97), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 15/128 (11%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   LDLGTG+G   L   + +   +    D++ +ALE  +     +G +   D  +   
Sbjct: 162 VASALDLGTGSGIQALHAAQHA--TRVTATDLNPRALEFTRLTLALSGAAP-ADLREGSL 218

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V    FD+IVSNPP+   VI     L  R        DGG+ G    RT+      H
Sbjct: 219 FEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGDH 267

Query: 217 LNKDGLCS 224
           LN+ G   
Sbjct: 268 LNEGGYAQ 275


>gi|281420039|ref|ZP_06251038.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM
           18205]
 gi|281405839|gb|EFB36519.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM
           18205]
          Length = 290

 Score = 42.0 bits (97), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 75  RPET-ELLVDSALAFSLPRIEKRDVV------------RILDLGTGTGAVCLALLKESPF 121
           RP+  E+ +++ LAF     E   ++            RILD GTGTG + L   K    
Sbjct: 118 RPDMIEIGIEAKLAFGTGNHETTRMIISQLLHMPIRTKRILDCGTGTGILALTCSKLGAK 177

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVIVSN 171
              VG DI   ++E AK NAV NGV+   + L   S   + + G+FD++++N
Sbjct: 178 -DVVGYDIDEWSVENAKHNAVLNGVT-NMEVLFGNSQVINHISGVFDLVLAN 227


>gi|212710671|ref|ZP_03318799.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM
           30120]
 gi|212686752|gb|EEB46280.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM
           30120]
          Length = 244

 Score = 42.0 bits (97), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G+G+G + L L + +       V++   A   A  N   +  S+R      D  +  
Sbjct: 49  LDIGSGSGLIALMLAQRNTQLHIDAVELDADAASQAHENFNASPWSDRLQVFHQDIITFS 108

Query: 162 EG---LFDVIVSNPPYIESVIV 180
           E     +D+IVSNPPY E  + 
Sbjct: 109 EQPHRQYDLIVSNPPYFEPAVA 130


>gi|159899504|ref|YP_001545751.1| type 12 methyltransferase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892543|gb|ABX05623.1| Methyltransferase type 12 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 460

 Score = 42.0 bits (97), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           R++     RILDLG G G +   LLKES F   VG+D+S +AL I + 
Sbjct: 275 RLKASGAQRILDLGCGEGKLLRELLKESQFSAVVGMDLSTRALAILQQ 322


>gi|11387075|sp|P57413|RSMC_BUCAI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 338

 Score = 42.0 bits (97), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 182 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 241

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +N  + +   + S+ +S+V   FD+I+SNPP+
Sbjct: 242 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 272


>gi|307595611|ref|YP_003901928.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550812|gb|ADN50877.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 214

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 7/78 (8%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDLG GTG  A+  AL+      + + VDI  +AL IAK +A   G++   D + +D 
Sbjct: 59  RVLDLGCGTGRFAIAAALMGAR---QVICVDIDPEALTIAKESASEYGLNN-VDFVTNDV 114

Query: 158 FS-SVEGLFDVIVSNPPY 174
            + ++ G F+VI  NPP+
Sbjct: 115 RNMAITGKFNVIFQNPPF 132


>gi|146321640|ref|YP_001201351.1| Type I restriction-modification system methyltransferase subunit
           [Streptococcus suis 98HAH33]
 gi|253752459|ref|YP_003025600.1| type I restriction-modification system M protein [Streptococcus
           suis SC84]
 gi|253754285|ref|YP_003027426.1| type I restriction-modification system M protein [Streptococcus
           suis P1/7]
 gi|145692446|gb|ABP92951.1| Type I restriction-modification system methyltransferase subunit
           [Streptococcus suis 98HAH33]
 gi|251816748|emb|CAZ52390.1| type I restriction-modification system M protein [Streptococcus
           suis SC84]
 gi|251820531|emb|CAR47286.1| type I restriction-modification system M protein [Streptococcus
           suis P1/7]
 gi|292559063|gb|ADE32064.1| Type I restriction-modification system M subunit [Streptococcus
           suis GZ1]
 gi|319758863|gb|ADV70805.1| Type I restriction-modification system methyltransferase subunit
           [Streptococcus suis JS14]
          Length = 529

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%)

Query: 93  IEKRDV-VRILDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSN------AV 142
           +EK D    + D   G+G++ L +  E P     K  G +++     +A+ N        
Sbjct: 221 LEKSDTSFSVYDPTMGSGSLLLTVRNELPQGQHIKFYGQEMNTTTYNLARMNLMMHQVGY 280

Query: 143 TNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPY 174
           +N +    DTL+SDW   V+ L       FD +V+NPPY
Sbjct: 281 SNMILNNADTLESDWPDGVDELGIDQPRSFDAVVANPPY 319


>gi|148550203|ref|YP_001270305.1| hypothetical protein Pput_5001 [Pseudomonas putida F1]
 gi|148514261|gb|ABQ81121.1| SAM-dependent methyltransferase [Pseudomonas putida F1]
 gi|313501103|gb|ADR62469.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 398

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+SE+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R LNKDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343


>gi|268323944|emb|CBH37532.1| hypothetical membrane protein, methyltransferase domain family
           [uncultured archaeon]
          Length = 257

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA----LEIAKSNAVTNGVSER--FDTL 153
           + LD+GTG+G   + + K+ P  K +G+D   KA    +E+ ++NA T GV +R  F   
Sbjct: 90  KALDIGTGSGGCAIKVAKKFPNSKVMGIDYWGKAWSYSMEVCENNAATEGVGQRTNFQRA 149

Query: 154 QSDWFSSVEGLFDVIVSN 171
            +      +G FD  VSN
Sbjct: 150 SAADLPFDDGEFDAAVSN 167


>gi|295402000|ref|ZP_06811962.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109181|ref|YP_003987497.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
 gi|294976002|gb|EFG51618.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214282|gb|ADP72886.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
          Length = 249

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DL TG G + L LL      K +GV+I  +  ++AK +   NG+ ++ + +  D   +
Sbjct: 49  IVDLCTGNGVIPL-LLSMRTKGKIIGVEIQERLCDMAKRSVKYNGLEKQIEIIHGDIKDA 107

Query: 161 VEGL----FDVIVSNPPYIESV 178
            + L    +DV+  NPPY  ++
Sbjct: 108 PKQLGYSKYDVVTCNPPYFPTI 129


>gi|222034813|emb|CAP77556.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           LF82]
 gi|312947653|gb|ADR28480.1| putative methyltransferase small domain protein [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 378

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL+++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQAKVVFVDESSMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|254303277|ref|ZP_04970635.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323469|gb|EDK88719.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 223

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 83  DSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D+ L F L +  + K+++ ++LD+GTG G + + L       + +G+DI  + ++ A   
Sbjct: 29  DTILLFKLFQDSLNKKNI-KLLDIGTGNGILPILLSDNKFLTELIGIDIQKENIDRANKA 87

Query: 141 AVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              N + +  +F+ +    + +    FD+I+SNPPY++
Sbjct: 88  LELNKIEKNIQFECIDIREYKN-SNYFDIIISNPPYMD 124


>gi|78706836|ref|NP_001027221.1| CG9960 [Drosophila melanogaster]
 gi|7295917|gb|AAF51216.1| CG9960 [Drosophila melanogaster]
 gi|17861576|gb|AAL39265.1| GH13185p [Drosophila melanogaster]
 gi|220944536|gb|ACL84811.1| CG9960-PA [synthetic construct]
 gi|220954408|gb|ACL89747.1| CG9960-PA [synthetic construct]
          Length = 224

 Score = 42.0 bits (97), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+ + F   +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLEYLDRLQPSLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            KA    +  A  NG   R D+++     ++     DV++ NPPY   V+     L+ + 
Sbjct: 77  PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPY---VVTSDEELQTQQ 131

Query: 190 FD 191
           FD
Sbjct: 132 FD 133


>gi|147677215|ref|YP_001211430.1| ribosomal protein L11 methyltransferase [Pelotomaculum
           thermopropionicum SI]
 gi|189037699|sp|A5D3Y3|PRMA_PELTS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146273312|dbj|BAF59061.1| ribosomal protein L11 methylase [Pelotomaculum thermopropionicum
           SI]
          Length = 308

 Score = 42.0 bits (97), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GTG+G + +A  +     + V VDI   A  +A  NA  NGV+ +   +Q +    
Sbjct: 174 VYDVGTGSGVLAVAAARLG-AGRVVAVDIDPLACRVAAGNAERNGVAGKVQVVQGNLLEK 232

Query: 161 VEGLFDVIVSN 171
           VEG  D++V+N
Sbjct: 233 VEGRADLVVAN 243


>gi|167036166|ref|YP_001671397.1| hypothetical protein PputGB1_5177 [Pseudomonas putida GB-1]
 gi|166862654|gb|ABZ01062.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 398

 Score = 42.0 bits (97), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+SE+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R LNKDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLNKDGILVSASCSMHL 343


>gi|67921842|ref|ZP_00515359.1| probable methyltransferase [Crocosphaera watsonii WH 8501]
 gi|67856434|gb|EAM51676.1| probable methyltransferase [Crocosphaera watsonii WH 8501]
          Length = 241

 Score = 42.0 bits (97), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +L++D+ +A  +P     +  RIL+LG GTG + L LLK  P  + V VD S + +E
Sbjct: 28  PYYDLMLDTLVA-CVPS----NSSRILELGCGTGELSLKLLKHCPNAQIVAVDYSPRMIE 82

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           ++K         ER   +Q D+ +   G
Sbjct: 83  MSKYKLGKTEFLERITFIQGDFGAWANG 110


>gi|326382694|ref|ZP_08204385.1| modification methylase, HemK family protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326198813|gb|EGD55996.1| modification methylase, HemK family protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 258

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D RQ   L    VR    E +  ++G  +F  + L +    F PR  + LL  +A+    
Sbjct: 34  DPRQ---LAAWAVRRAAGEPLEHVVGRVEFAGLDLVVGPGAFVPRQRSALLAATAVDL-- 88

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  R     ++   G   +   +         V  D    AL  A  N   + V  R 
Sbjct: 89  --LAARRSPVFVEAFCGVAPIAAYVADRCRGAYVVATDADPVALAFAAENLSADAVY-RG 145

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTI 209
             L S     + G  DVI + PPY+    V+ L  E  D +PR +L  GG DGL     +
Sbjct: 146 AGL-SGLPEPLRGRVDVIAAVPPYVPESAVELLPHEAVDHEPRAALVGGGDDGLLRAAEL 204

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231
                  L   G   +E+   Q
Sbjct: 205 LQQARSWLLDGGAVVIEMNVAQ 226


>gi|229917367|ref|YP_002886013.1| methyltransferase small [Exiguobacterium sp. AT1b]
 gi|229468796|gb|ACQ70568.1| methyltransferase small [Exiguobacterium sp. AT1b]
          Length = 198

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL+++   F +P +  R    ILD+G G G + ++L   S   + + +D++ +AL ++
Sbjct: 46  SRLLIET---FEMPDVSGR----ILDVGCGYGPMGISLADASGR-EALLIDVNERALALS 97

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           + NA  NGV+   +T  S  + +V G  F  IV+NPP
Sbjct: 98  EQNAARNGVT--VETRLSHAYDAVGGERFAAIVTNPP 132


>gi|318080200|ref|ZP_07987532.1| modification methylase, HemK family protein [Streptomyces sp.
           SA3_actF]
          Length = 129

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + R +  E +  ++G   F+ +R+ +    F PR  +E LV  ALA     +     V +
Sbjct: 50  VARRVAGEPLEHVVGHAVFHGLRIAVGPGVFVPRRRSEFLVARALAG----VRAEGAVTL 105

Query: 102 LDLGTGTGAVCLAL 115
           LDL  G+GA+ LAL
Sbjct: 106 LDLCCGSGALGLAL 119


>gi|300866067|ref|ZP_07110797.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335928|emb|CBN55955.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 259

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 34/57 (59%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           RIL+LG GTG + L LL+  P+ + + VD S + L  AK+     G ++R+  ++ D
Sbjct: 58  RILELGCGTGELSLKLLRCYPYTQIIAVDYSPRMLRFAKAKIEAAGFADRWVGIELD 114


>gi|319763928|ref|YP_004127865.1| methyltransferase small [Alicycliphilus denitrificans BC]
 gi|317118489|gb|ADV00978.1| methyltransferase small [Alicycliphilus denitrificans BC]
          Length = 379

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  +++ +AL  A+ N    G+ +R + L +D F    
Sbjct: 205 DIGTGTG-VLAAVLARRGVRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP-- 261

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++ +     +   V D   R+ L G + GL  +
Sbjct: 262 GRAPLVVCNPPWLPARPSSAIEQAVYDEGSRM-LKGFLAGLREH 304


>gi|256061475|ref|ZP_05451619.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
 gi|261325481|ref|ZP_05964678.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
 gi|261301461|gb|EEY04958.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|308235827|ref|ZP_07666564.1| methyltransferase small domain protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114409|ref|YP_003985630.1| putative 16S rRNA methyltransferase [Gardnerella vaginalis ATCC
           14019]
 gi|310945903|gb|ADP38607.1| possible 16S rRNA methyltransferase [Gardnerella vaginalis ATCC
           14019]
          Length = 233

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-----DTLQ 154
           R  D+G G GA+ LAL  ESP  +   VD++ +AL++   NA   G++        D L+
Sbjct: 90  RFFDIGCGWGAISLALGFESPNAQIYAVDVNERALDLTDINAKNAGLNNIHTYLVEDALK 149

Query: 155 SDWFSSVEGLFDVIVSNPP 173
            D    +    D+I SNPP
Sbjct: 150 EDALKDI----DLIWSNPP 164


>gi|212640060|ref|YP_002316580.1| adenine-specific DNA methyltransferase BseCI [Anoxybacillus
           flavithermus WK1]
 gi|212561540|gb|ACJ34595.1| Adenine-specific DNA methyltransferase BseCI [Anoxybacillus
           flavithermus WK1]
          Length = 577

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 25/150 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSER 149
           E++ V+R+LD   G G + LA+ K +       + +GVD    A+ IA      +G  + 
Sbjct: 40  EEKRVIRVLDPACGDGELLLAINKVAQSMNIQLELIGVDSDIDAINIANERLSRSG-HKN 98

Query: 150 FDTLQSDWFSSV-EG----LF--------DVIVSNPPYIESVIVDCLGLE-VRDFDPRIS 195
           F  +  D+   V EG    LF        D+I++NPPY+ + I   LG E  +    + +
Sbjct: 99  FRLINKDFLEMVSEGDNYDLFNTEELEPADIIIANPPYVRTQI---LGAEKAQQLRKKFN 155

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L G +D    Y+     +++ L  +G+  V
Sbjct: 156 LKGRVD---LYQAFLVAMTQQLKSNGIMGV 182


>gi|149926970|ref|ZP_01915228.1| methyltransferase small [Limnobacter sp. MED105]
 gi|149824191|gb|EDM83411.1| methyltransferase small [Limnobacter sp. MED105]
          Length = 397

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+GTGTG V  A+L +      V  D   +ALE A+ N    G+ ++   +Q+D F   
Sbjct: 223 VDVGTGTG-VLAAVLAQRWLSNIVATDNDPRALECAQFNVQNLGMGKQVKVVQADLFPDS 281

Query: 162 EGLFDVIVSNPPYI 175
           +   D+IV NPP++
Sbjct: 282 KA--DLIVCNPPWL 293


>gi|62290310|ref|YP_222103.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 1
           str. 9-941]
 gi|82700234|ref|YP_414808.1| ribosomal protein L11 methyltransferase [Brucella melitensis biovar
           Abortus 2308]
 gi|189024544|ref|YP_001935312.1| ribosomal protein L11 methyltransferase [Brucella abortus S19]
 gi|237815817|ref|ZP_04594814.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308
           A]
 gi|254697754|ref|ZP_05159582.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254730643|ref|ZP_05189221.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260546853|ref|ZP_05822592.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC
           8038]
 gi|260758358|ref|ZP_05870706.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260762184|ref|ZP_05874527.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|81309399|sp|Q57C92|PRMA_BRUAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|123547003|sp|Q2YPS7|PRMA_BRUA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710055|sp|B2S6P1|PRMA_BRUA1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|62196442|gb|AAX74742.1| ribosomal protein L11 methyltransferase, hypothetical [Brucella
           abortus bv. 1 str. 9-941]
 gi|82616335|emb|CAJ11392.1| SAM (and some other nucleotide) binding motif [Brucella melitensis
           biovar Abortus 2308]
 gi|189020116|gb|ACD72838.1| SAM (and some other nucleotide) binding motif [Brucella abortus
           S19]
 gi|237789115|gb|EEP63326.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308
           A]
 gi|260095903|gb|EEW79780.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC
           8038]
 gi|260668676|gb|EEX55616.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260672616|gb|EEX59437.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|238754657|ref|ZP_04616010.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC
           29473]
 gi|238707116|gb|EEP99480.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC
           29473]
          Length = 317

 Score = 42.0 bits (97), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 186 IIDFGCGSGILAIAALKLG-ASRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSKDQPA 244

Query: 160 SVEGLFDVIVSN 171
            +    DV+V+N
Sbjct: 245 DLSA--DVVVAN 254


>gi|226325840|ref|ZP_03801358.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758]
 gi|225205964|gb|EEG88318.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758]
          Length = 251

 Score = 42.0 bits (97), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +++  + V  LDLGTGTG + + L  ++      G++I  ++ ++A  + 
Sbjct: 32  MDAVLLSAFAKVKAGECV--LDLGTGTGILPILLAAKTKGKHFTGLEIQEESADMACRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
             N + E+ D +  D   + +    G  DVI +NPPY+
Sbjct: 90  RHNRLEEQIDIVTGDIKEASQIFGKGSMDVITTNPPYM 127


>gi|46914918|emb|CAG21693.1| putative ribosomal protein L11 methyltransferase [Photobacterium
           profundum SS9]
          Length = 317

 Score = 42.0 bits (97), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P    +L+D  LAF           L  ++ +D+V   I+D G G+G + +A LK   
Sbjct: 146 PEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGCGSGILAIAALKLG- 204

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             K +G+DI  +A++ ++ NA  NGVS++    L  D  + V+   DV+V+N
Sbjct: 205 AEKVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQDQPTDVQA--DVVVAN 254


>gi|330823808|ref|YP_004387111.1| methyltransferase small [Alicycliphilus denitrificans K601]
 gi|329309180|gb|AEB83595.1| methyltransferase small [Alicycliphilus denitrificans K601]
          Length = 379

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  +++ +AL  A+ N    G+ +R + L +D F    
Sbjct: 205 DIGTGTG-VLAAVLARRGVRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP-- 261

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++ +     +   V D   R+ L G + GL  +
Sbjct: 262 GRAPLVVCNPPWLPARPSSAIEQAVYDEGSRM-LKGFLAGLREH 304


>gi|116073695|ref|ZP_01470957.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916]
 gi|116069000|gb|EAU74752.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916]
          Length = 400

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           S P +     +RILD G GTG     L   +P    + VDIS  AL++A+     +G +E
Sbjct: 52  SKPPLSSAPPLRILDAGCGTGVTTDYLCHSNPGADVLAVDISAGALDVARERLRRSGAAE 111

Query: 149 RFDTLQSDWFS----SVEGLFDVIVS 170
              +L+ +  S    + EG FD I S
Sbjct: 112 VVSSLRQEQRSLLDLAGEGAFDYINS 137


>gi|17986875|ref|NP_539509.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|23502288|ref|NP_698415.1| ribosomal protein L11 methyltransferase [Brucella suis 1330]
 gi|161619365|ref|YP_001593252.1| ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365]
 gi|225627869|ref|ZP_03785906.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo]
 gi|225852899|ref|YP_002733132.1| ribosomal protein L11 methyltransferase [Brucella melitensis ATCC
           23457]
 gi|254689612|ref|ZP_05152866.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|254694102|ref|ZP_05155930.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|254702139|ref|ZP_05163967.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|254704675|ref|ZP_05166503.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|254710459|ref|ZP_05172270.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|254714452|ref|ZP_05176263.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|254717350|ref|ZP_05179161.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|256031953|ref|ZP_05445567.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|256045048|ref|ZP_05447949.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113971|ref|ZP_05454754.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|256160152|ref|ZP_05457846.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|256255358|ref|ZP_05460894.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|256257861|ref|ZP_05463397.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|256263619|ref|ZP_05466151.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2
           str. 63/9]
 gi|256369833|ref|YP_003107344.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915]
 gi|260169090|ref|ZP_05755901.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|260565353|ref|ZP_05835837.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|260566077|ref|ZP_05836547.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str.
           40]
 gi|260755139|ref|ZP_05867487.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260884151|ref|ZP_05895765.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|261214400|ref|ZP_05928681.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|261219180|ref|ZP_05933461.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|261222559|ref|ZP_05936840.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|261318030|ref|ZP_05957227.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261322241|ref|ZP_05961438.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|261752708|ref|ZP_05996417.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|261755368|ref|ZP_05999077.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|261758595|ref|ZP_06002304.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|265989061|ref|ZP_06101618.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|265991474|ref|ZP_06104031.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265995312|ref|ZP_06107869.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|265998524|ref|ZP_06111081.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|297248697|ref|ZP_06932415.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5
           str. B3196]
 gi|38605324|sp|Q8FZQ6|PRMA_BRUSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|38605404|sp|Q8YI53|PRMA_BRUME RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189037691|sp|A9M676|PRMA_BRUC2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254782832|sp|C0RE56|PRMA_BRUMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|17982514|gb|AAL51773.1| ribosomal protein l11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|23348263|gb|AAN30330.1| ribosomal protein L11 methyltransferase, putative [Brucella suis
           1330]
 gi|161336176|gb|ABX62481.1| Ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365]
 gi|225617874|gb|EEH14919.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo]
 gi|225641264|gb|ACO01178.1| ribosomal L11 methyltransferase [Brucella melitensis ATCC 23457]
 gi|255999996|gb|ACU48395.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915]
 gi|260151421|gb|EEW86515.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|260155595|gb|EEW90675.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str.
           40]
 gi|260675247|gb|EEX62068.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260873679|gb|EEX80748.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|260916007|gb|EEX82868.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|260921143|gb|EEX87796.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|260924269|gb|EEX90837.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|261294931|gb|EEX98427.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|261297253|gb|EEY00750.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261738579|gb|EEY26575.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|261742461|gb|EEY30387.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|261745121|gb|EEY33047.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|262553148|gb|EEZ08982.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|262766425|gb|EEZ12214.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|263002258|gb|EEZ14833.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263093671|gb|EEZ17676.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2
           str. 63/9]
 gi|264661258|gb|EEZ31519.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|297175866|gb|EFH35213.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5
           str. B3196]
 gi|326409441|gb|ADZ66506.1| ribosomal protein L11 methyltransferase [Brucella melitensis M28]
 gi|326539147|gb|ADZ87362.1| ribosomal L11 methyltransferase [Brucella melitensis M5-90]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|311695157|gb|ADP98030.1| rRNA (guanine-N(2)-)-methyltransferase [marine bacterium HP15]
          Length = 348

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 101 ILDLGTGTGAVCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +LD   G G +   L +       P     G+D+  +A+  A++    NGVS R   + S
Sbjct: 205 VLDFACGAGVLGAWLHRWQERQGLPRLTIDGIDVQSQAVICARATYERNGVSGRI--MAS 262

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVD 181
           D    VEG + VI+SNPP+   V  D
Sbjct: 263 DGLPGVEGSWPVILSNPPFHSGVRTD 288


>gi|294815643|ref|ZP_06774286.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
 gi|294328242|gb|EFG09885.1| Methyltransferase type 12 [Streptomyces clavuligerus ATCC 27064]
          Length = 535

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 68  SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S+DT E P P  E   ++ LA     + +    R+LDLG G G +  ALLK+  F + VG
Sbjct: 286 STDTEEKPVPLAEQRREAILAA----LREAGAGRVLDLGCGQGQLVQALLKDVRFTEIVG 341

Query: 127 VDISCKALEIAKSNAVTNGVSER 149
           VD+S +AL IA      + + ER
Sbjct: 342 VDVSVRALTIAGRRLRLDRMGER 364


>gi|296825008|ref|XP_002850746.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238838300|gb|EEQ27962.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 288

 Score = 42.0 bits (97), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 22/90 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK---SNAVTNGVS-ERFDTLQ 154
           ILDLGTG G++ L LL+E   F G  VGVD S K++E+A+       + G+  E +D L 
Sbjct: 105 ILDLGTGNGSM-LTLLREEGGFDGPMVGVDYSIKSIELARRLVGETASEGIRFEVWDILD 163

Query: 155 S---------------DWFSSVEGLFDVIV 169
                           DWF   EG FD+++
Sbjct: 164 PKHEADIRDGVFGKDVDWFPFEEGGFDIVL 193


>gi|259419236|ref|ZP_05743153.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B]
 gi|259345458|gb|EEW57312.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B]
          Length = 405

 Score = 42.0 bits (97), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 15/85 (17%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R+LD+ +  G   LA+L       G G    VD S  AL++A + A  +G  +RF+  Q
Sbjct: 232 ARVLDVFSHVGGFGLAMLA-----AGAGHATCVDGSAAALDLATAGAAASGHGDRFEARQ 286

Query: 155 SDWFSSVEGL------FDVIVSNPP 173
            D F  +  L      FDV+V +PP
Sbjct: 287 GDAFDVLTALGAEGAQFDVVVCDPP 311


>gi|325676589|ref|ZP_08156267.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|325552767|gb|EGD22451.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 412

 Score = 42.0 bits (97), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR+  R+    +DLG GTG + ++L K  P  + +  D S  A+  A + A  NGV+ R
Sbjct: 262 LPRM--REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAAR 319

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206
              L+ D  SS+ E   D+I+ NPP+     V   G   + FD   R+   GG       
Sbjct: 320 VRVLRDDALSSLPESSVDLILCNPPFHVGAAVHT-GSAGKMFDAAGRVLRPGG-----EL 373

Query: 207 RTIAD---GVSRHLNKDGLCSVEIGYNQKVDVVR 237
            T+ +   G  R L +    + E+G N K  V R
Sbjct: 374 WTVYNSHLGYKRALERAVGRTEEVGRNPKFTVTR 407


>gi|270265309|ref|ZP_06193570.1| methyltransferase small [Serratia odorifera 4Rx13]
 gi|270040713|gb|EFA13816.1| methyltransferase small [Serratia odorifera 4Rx13]
          Length = 476

 Score = 42.0 bits (97), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           R+LD+G+G+G + L L + S     +  V++   A E A+ N + +   +R      D  
Sbjct: 277 RVLDIGSGSGLIALMLAQRSADNVLIDAVELDEAAAEQARDNVLASPWPQRIRVHAQDIH 336

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180
            +     G +D+IVSNPPY E  + 
Sbjct: 337 HFARHHAGEYDLIVSNPPYFEPAVA 361


>gi|254390561|ref|ZP_05005776.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326443992|ref|ZP_08218726.1| hypothetical protein SclaA2_23139 [Streptomyces clavuligerus ATCC
           27064]
 gi|197704263|gb|EDY50075.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 521

 Score = 42.0 bits (97), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 68  SSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S+DT E P P  E   ++ LA     + +    R+LDLG G G +  ALLK+  F + VG
Sbjct: 272 STDTEEKPVPLAEQRREAILAA----LREAGAGRVLDLGCGQGQLVQALLKDVRFTEIVG 327

Query: 127 VDISCKALEIAKSNAVTNGVSER 149
           VD+S +AL IA      + + ER
Sbjct: 328 VDVSVRALTIAGRRLRLDRMGER 350


>gi|306843236|ref|ZP_07475846.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2]
 gi|306286559|gb|EFM58138.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2]
          Length = 285

 Score = 42.0 bits (97), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|254708090|ref|ZP_05169918.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261315592|ref|ZP_05954789.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261304618|gb|EEY08115.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
          Length = 267

 Score = 42.0 bits (97), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|167038525|ref|YP_001666103.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167038733|ref|YP_001661718.1| methyltransferase small [Thermoanaerobacter sp. X514]
 gi|256751395|ref|ZP_05492274.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913682|ref|ZP_07130999.1| putative RNA methylase [Thermoanaerobacter sp. X561]
 gi|307723303|ref|YP_003903054.1| RNA methylase [Thermoanaerobacter sp. X513]
 gi|320116921|ref|YP_004187080.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166852973|gb|ABY91382.1| methyltransferase small [Thermoanaerobacter sp. X514]
 gi|166857359|gb|ABY95767.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256749777|gb|EEU62802.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890367|gb|EFK85512.1| putative RNA methylase [Thermoanaerobacter sp. X561]
 gi|307580364|gb|ADN53763.1| RNA methylase [Thermoanaerobacter sp. X513]
 gi|319930012|gb|ADV80697.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 248

 Score = 42.0 bits (97), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 12/84 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG GTG + + +  ++      GV+I     ++A  + V N + ER   ++ D   
Sbjct: 45  KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 101

Query: 160 SVEGL--------FDVIVSNPPYI 175
            V GL        FD++ SNPPY+
Sbjct: 102 -VRGLEKILGYEKFDIVTSNPPYM 124


>gi|323352583|gb|EGA85082.1| Mtq1p [Saccharomyces cerevisiae VL3]
          Length = 195

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 6/139 (4%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDV- 98
           A ++  KH  +  IL  + F  + +        PR ETE  V + + A +   + +  + 
Sbjct: 52  ACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRHTIP 111

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + + L 
Sbjct: 112 LHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHNILS 171

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           S          D++  NPP
Sbjct: 172 SKASDEYPSHIDILTGNPP 190


>gi|297560848|ref|YP_003679822.1| methyltransferase type 12 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845296|gb|ADH67316.1| Methyltransferase type 12 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 314

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RI+DLG GTGA   ALL   P  +   VD S   L+   + A   GV ER  T+++D
Sbjct: 78  DPRRIVDLGCGTGAGTFALLDRFPGARVTAVDTSDGHLQRLNAKARALGVEERVRTVRAD 137

Query: 157 WFSS 160
             SS
Sbjct: 138 LDSS 141


>gi|294852744|ref|ZP_06793417.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|294821333|gb|EFG38332.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL
           07-0026]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|294497118|ref|YP_003560818.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM
           B1551]
 gi|294347055|gb|ADE67384.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM
           B1551]
          Length = 457

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 29/154 (18%)

Query: 41  AIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELLVDSAL 86
           +IV+++  +  + ILG      W + Y      +V+  +S+ +F +  PE T++L D AL
Sbjct: 244 SIVQNVNSKRTNVILGNQTNVLWGEEYIYDYIGDVKFAISAKSFYQVNPEQTKVLYDKAL 303

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ++    E+     ++D   G G + L L +++   K  GV+I  +A+E AK NA  NG+
Sbjct: 304 EYADLTGEET----VIDAYCGIGTISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGI 357

Query: 147 -SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173
            +  F+  +++     W+   +G+  DVIV +PP
Sbjct: 358 HNAEFEVGEAEVVIPNWYK--QGIKADVIVVDPP 389


>gi|62181217|ref|YP_217634.1| hypothetical protein SC2647 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128850|gb|AAX66553.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715705|gb|EFZ07276.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 287

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 6/85 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DV RILD+GTG+G + L L + +     +  V++   A   A+ N   +    R  T+ +
Sbjct: 68  DVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI-TVHT 126

Query: 156 D----WFSSVEGLFDVIVSNPPYIE 176
           D    W       FD+I+SNPPY E
Sbjct: 127 DDIQRWAPRQTVRFDLIISNPPYYE 151


>gi|319775650|ref|YP_004138138.1| O-methyltransferase [Haemophilus influenzae F3047]
 gi|329122298|ref|ZP_08250886.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116]
 gi|317450241|emb|CBY86457.1| predicted O-methyltransferase [Haemophilus influenzae F3047]
 gi|327473859|gb|EGF19276.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116]
          Length = 232

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G GTG + L L + +     +  V++   A + A+ N   +    R    Q+D   
Sbjct: 39  ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQADIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|315659118|ref|ZP_07911983.1| methyltransferase domain protein [Staphylococcus lugdunensis
           M23590]
 gi|315495842|gb|EFU84172.1| methyltransferase domain protein [Staphylococcus lugdunensis
           M23590]
          Length = 202

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 40  NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
             IV S +H+ +  +     F   ++   SD         LL+ + L    P   K    
Sbjct: 16  QTIVYSYQHDKLQLVTDAGVFSKDKVDFGSD---------LLIQTFLNEHPPGPSKS--- 63

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I+D+G G G + L + K  P  K   +D++ +AL +A+ N+  N + +     +SD  S
Sbjct: 64  -IVDVGCGYGPIGLTIAKICPHHKVTMLDVNQRALALAEKNSKHNQI-DNVIIKESDGLS 121

Query: 160 SVE-GLFDVIVSNPP 173
           +V+    D I++NPP
Sbjct: 122 AVKHNACDYILTNPP 136


>gi|119487934|ref|ZP_01621431.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106]
 gi|119455510|gb|EAW36648.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106]
          Length = 239

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQ-SD 156
           ILD+GTGTG V L L + S      V +D  C  ++ AK N   +   ER   D L   D
Sbjct: 44  ILDIGTGTGLVALMLAQRSTAQIDAVEID-ECSCIQ-AKENIELSPWKERIKVDNLSVQD 101

Query: 157 WFSSVEGLFDVIVSNPPYIESV 178
           +  S    +++IVSNPP+ E+ 
Sbjct: 102 YTKSCSKRYNLIVSNPPFFENA 123


>gi|15889356|ref|NP_355037.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens
           str. C58]
 gi|38605383|sp|Q8UDP9|PRMA_AGRT5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|15157200|gb|AAK87822.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens
           str. C58]
          Length = 292

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 28/151 (18%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           +  R V   LDLGTG+G + +A+ K  P    +  DI   A+++AK N   NG+      
Sbjct: 147 LRARKVRNALDLGTGSGVLAIAVRKMRP-IPVLATDIDPIAVKVAKENVRLNGIVSGMAL 205

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSN---PPYIE-------------SVIVDCLGLEVRDFD 191
           E      SD F    G FD+I++N    P I+             +VI+  + L  + + 
Sbjct: 206 ETAPGFHSDAFRK-HGPFDLIIANILARPLIKMAPQLVTHLAPGGTVILSGI-LASQRWK 263

Query: 192 PRISLDGGIDGLSHYRTI--ADGVSRHLNKD 220
              + +G    LSH RTI   D V+ HL KD
Sbjct: 264 VLSAYNGA--KLSHIRTIWRNDWVTLHLRKD 292


>gi|226942497|ref|YP_002797570.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ]
 gi|226717424|gb|ACO76595.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ]
          Length = 397

 Score = 42.0 bits (97), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NGV+E+   ++ D F +++ L      FDV++++PP +I+   
Sbjct: 249 VDGSALALDGVERNAALNGVAEKMACVEGDVFEAMKELKAAEERFDVVIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R LNKDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEAAMRLLNKDGILVSASCSMHL 343


>gi|312110153|ref|YP_003988469.1| methyltransferase type 12 [Geobacillus sp. Y4.1MC1]
 gi|311215254|gb|ADP73858.1| Methyltransferase type 12 [Geobacillus sp. Y4.1MC1]
          Length = 247

 Score = 42.0 bits (97), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P  + +L V       L +  ++   RILD+G GTG + + L KE   F   GVD+S   
Sbjct: 18  PYEQWQLFVQK----KLKQYGRKGAKRILDIGCGTGELAIRLAKEG--FLVTGVDLSENM 71

Query: 134 LEIAKSNAVTNGVSERF 150
           L IA++ A T  V+  F
Sbjct: 72  LAIAQAKAETQHVAIEF 88


>gi|238759675|ref|ZP_04620835.1| Methyltransferase small [Yersinia aldovae ATCC 35236]
 gi|238702103|gb|EEP94660.1| Methyltransferase small [Yersinia aldovae ATCC 35236]
          Length = 219

 Score = 42.0 bits (97), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G G+G + L + + S     + GV++   A + A SNA ++  + R    + D  
Sbjct: 21  RVLDIGCGSGLIALMIAQRSASDVLIDGVELEPAAAQQAISNAESSPWAARVHIYEQDVH 80

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    + 
Sbjct: 81  QFAENHPQQYDLIVSNPPYFAPAVA 105


>gi|329297697|ref|ZP_08255033.1| methyltransferase small [Plautia stali symbiont]
          Length = 249

 Score = 42.0 bits (97), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+G G+G + L L + +P    +  V++   A   A+ N   +  + R      D
Sbjct: 49  VRRILDIGCGSGLIALMLAQRTPDDVSIDAVELERSAAAQAQENVAASPWAHRIAVHAQD 108

Query: 157 ---WFSSVEGLFDVIVSNPPY 174
              W    E  + +IVSNPP+
Sbjct: 109 IVSWREQAEKRYSLIVSNPPF 129


>gi|306818494|ref|ZP_07452217.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|307700681|ref|ZP_07637706.1| methyltransferase small domain protein [Mobiluncus mulieris
           FB024-16]
 gi|304648667|gb|EFM45969.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|307613676|gb|EFN92920.1| methyltransferase small domain protein [Mobiluncus mulieris
           FB024-16]
          Length = 268

 Score = 42.0 bits (97), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
           +D+G G G + L + ++ P  + V VD++ +AL++   NA  NG+         +     
Sbjct: 128 VDVGCGWGPLSLVMARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLAEAAALAQL 187

Query: 161 VEGLFDVIVSNPP 173
            +G  DVI SNPP
Sbjct: 188 ADGSVDVIWSNPP 200


>gi|296454450|ref|YP_003661593.1| methyltransferase small [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183881|gb|ADH00763.1| methyltransferase small [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 218

 Score = 42.0 bits (97), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 14/86 (16%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------VSERFDTL 153
           LDLG G G + L L  ESP      VD++ +AL++  +NA  NG        V E    L
Sbjct: 63  LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGRTNIHTAQVDESSTPL 122

Query: 154 ----QSDWFSSVEG--LFDVIVSNPP 173
               Q  +  +V G   FD I SNPP
Sbjct: 123 PAENQPAFCETVPGDLTFDAIWSNPP 148


>gi|118470628|ref|YP_886876.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171915|gb|ABK72811.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score = 42.0 bits (97), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 19/118 (16%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+D+                +LD G G  A  L L  +   F  VG+D S  
Sbjct: 30  EPQPEIRKLIDAGKFHG----------EVLDAGCGEAATALYLAAQG--FTTVGLDQSPT 77

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A+E+A++ A   G++   F+      F+  +G F  IV      +S +   + +E+RD
Sbjct: 78  AIELARAEAARRGLTNATFEVADISSFTGYDGRFGTIV------DSTLFHSMPVELRD 129


>gi|239927102|ref|ZP_04684055.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
          Length = 209

 Score = 41.6 bits (96), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELL  +     +P         +LD+GTG  +  LAL       +   VD+S 
Sbjct: 2   YAPQEDTELLAGALSDEPVP-----PGADVLDMGTG--SGALALEAARRGTRVTAVDVSW 54

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +A+   + NA+  GV  R    + + F  V G  FD+I++NPPY+ +
Sbjct: 55  RAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPA 99


>gi|195576127|ref|XP_002077928.1| GD22808 [Drosophila simulans]
 gi|194189937|gb|EDX03513.1| GD22808 [Drosophila simulans]
          Length = 224

 Score = 41.6 bits (96), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+ + F   +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAGFSLCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
            KA    +  A  NG   R D+++     ++     DV++ NPPY+
Sbjct: 77  PKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYV 120


>gi|148977179|ref|ZP_01813806.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium
           SWAT-3]
 gi|145963461|gb|EDK28724.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium
           SWAT-3]
          Length = 295

 Score = 41.6 bits (96), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+E+ +          EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQ--DQPEGLLADVVVAN 231


>gi|91214962|ref|ZP_01251934.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC
           700755]
 gi|91186567|gb|EAS72938.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC
           700755]
          Length = 238

 Score = 41.6 bits (96), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 14/136 (10%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V  ILD+G GTG + L + + S F + +  V+I   A E    N   +   +R     SD
Sbjct: 38  VQSILDVGAGTGILALQMAQRS-FAETIDAVEIDPDAFEECVDNFENSPWGDRLYCYHSD 96

Query: 157 WFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + S    +E  +D+I+SNPP+ E  +   L  + R    R   D       ++ T+  GV
Sbjct: 97  FHSFAEEMEETYDLIISNPPFFE--VSKNLSTKGRS-TARSQTD------LNFETLVLGV 147

Query: 214 SRHLNKDGLCSVEIGY 229
           +  L+++G  SV + Y
Sbjct: 148 NHLLHQEGNLSVIVPY 163


>gi|15677697|ref|NP_274858.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           MC58]
 gi|38605482|sp|Q9JXW2|PRMA_NEIMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|7227119|gb|AAF42196.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           MC58]
 gi|316985471|gb|EFV64418.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           H44/76]
 gi|325133507|gb|EGC56170.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M13399]
 gi|325139522|gb|EGC62062.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           CU385]
 gi|325143757|gb|EGC66074.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240013]
 gi|325200920|gb|ADY96375.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           H44/76]
 gi|325206774|gb|ADZ02227.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M04-240196]
          Length = 295

 Score = 41.6 bits (96), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK    F  VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAGFA-VGVDIDEQAVRAGKDNAAQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|328883362|emb|CCA56601.1| hypothetical protein SVEN_3315 [Streptomyces venezuelae ATCC 10712]
          Length = 516

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 15/128 (11%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V   LDLGTG+G   L   + +        D++ +AL+  +     +G  E  + L    
Sbjct: 163 VASALDLGTGSGIQALHAAQHATLV--TATDLNPRALDFTRLTLALSGARE-AELLTGSL 219

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  V+G  +D+IVSNPP+   VI     L  R        DGG+ G    RT+       
Sbjct: 220 FEPVDGDTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQAGER 268

Query: 217 LNKDGLCS 224
           LN  G   
Sbjct: 269 LNDGGYAQ 276


>gi|317499444|ref|ZP_07957711.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893316|gb|EFV15531.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 244

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + + +  ++      G++I  +  ++A  +   N + ++ + ++ D   
Sbjct: 43  RVLDLGTGTGILPILMEAKTKAVHLTGLEIQPEMAKMAARSVKLNHLEDKIEIVEGDIKE 102

Query: 160 S----VEGLFDVIVSNPPYI 175
           +        FD I SNPPY+
Sbjct: 103 ASAIFSHDSFDTITSNPPYM 122


>gi|300904241|ref|ZP_07122100.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301302942|ref|ZP_07209070.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|300403774|gb|EFJ87312.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300841877|gb|EFK69637.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|315256603|gb|EFU36571.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
          Length = 219

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWVTQQTARFDLIISNPPYYQQG-VEC 106


>gi|220908170|ref|YP_002483481.1| hypothetical protein Cyan7425_2774 [Cyanothece sp. PCC 7425]
 gi|219864781|gb|ACL45120.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
          Length = 254

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++ G G G+  +  L  SPF   + G D++  A +IA+S      +++++      +FS
Sbjct: 55  VVEFGCGEGSPVINALLRSPFSGTIHGYDLNASACDIAQSTITQYRLNQQYQIYNCSFFS 114

Query: 160 SVEGLFDVIVSNPPYIES 177
                 D +++NPPY+ +
Sbjct: 115 FSHPQADYLIANPPYLPA 132


>gi|167033975|ref|YP_001669206.1| methyltransferase small [Pseudomonas putida GB-1]
 gi|166860463|gb|ABY98870.1| methyltransferase small [Pseudomonas putida GB-1]
          Length = 461

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +A  + S   + + VDI+  AL     N    G +       SD    V G 
Sbjct: 162 GTGIGAIVIATARRSA--RVMAVDINDLALRYTAINVALAGHAN-VSVKHSDVLQDVTGT 218

Query: 165 FDVIVSNPPYI 175
           FD+IV+NPPY+
Sbjct: 219 FDLIVANPPYM 229


>gi|332534744|ref|ZP_08410572.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035831|gb|EGI72315.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 232

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           +LD+GTGTG + L   + S       V+I   A   A  N   +    +S +  T+QS  
Sbjct: 39  LLDIGTGTGLLALMCKQRSNELDITAVEIDESAYTQALQNVANSPWPTISIKHQTIQS-- 96

Query: 158 FSSVEGLFDVIVSNPPY 174
           FSS E  FDV++SNPPY
Sbjct: 97  FSS-EVKFDVVISNPPY 112


>gi|306844316|ref|ZP_07476908.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1]
 gi|306275388|gb|EFM57129.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VETEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|148827622|ref|YP_001292375.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG]
 gi|262828400|sp|A5UGT6|TRMN6_HAEIG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|148718864|gb|ABQ99991.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG]
          Length = 232

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A++ A+ N   +    R   +Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  +    FD+IV+NPPY E  I 
Sbjct: 99  FLQTTAQTFDLIVANPPYFEQGIA 122


>gi|237741752|ref|ZP_04572233.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256845080|ref|ZP_05550538.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294785634|ref|ZP_06750922.1| DNA methylase [Fusobacterium sp. 3_1_27]
 gi|229429400|gb|EEO39612.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256718639|gb|EEU32194.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294487348|gb|EFG34710.1| DNA methylase [Fusobacterium sp. 3_1_27]
          Length = 243

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 16/119 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F         +DS L      I+K +  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFN------FSIDSLLISEFVNIQK-NTKKILDLGTGNAAIPLFLSKKTS- 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQS--DWFSSVEGLFDVIVSNPPY 174
            K  G++I   +  +A  N   N ++E+    +D +++   +F+     FD+I+SNPP+
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFNM--SFFDIIISNPPF 123


>gi|110680008|ref|YP_683015.1| hypothetical protein RD1_2799 [Roseobacter denitrificans OCh 114]
 gi|109456124|gb|ABG32329.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 407

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA L        + VD S  AL +A++ A  +G ++RF T Q D F
Sbjct: 235 ARVLDVFSHVGGFSLAALAGG-AQSALAVDGSAAALTLAEAGAKASGCADRFQTRQGDAF 293

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      FD+++ +PP
Sbjct: 294 EVLAALAQEGAQFDLVICDPP 314


>gi|238794626|ref|ZP_04638232.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC
           29909]
 gi|238726015|gb|EEQ17563.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC
           29909]
          Length = 293

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-ATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQALGVAQ 268


>gi|332366113|gb|EGJ43869.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1059]
          Length = 182

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  RL  + D    RP T+ +  +      P     D  R+LDL  G+G++ +  +    
Sbjct: 11  YGGRLLKTLDGKTTRPTTDKVKGAIFNMIGPYF---DGGRVLDLYAGSGSLAIEAISRG- 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI-E 176
             + V V+   +A  I   N       ERFD L+ +   ++E   G FD+++ +PPY  E
Sbjct: 67  MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGRALEILTGAFDLVLLDPPYAKE 126

Query: 177 SVIVDCLGLE-----------VRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            ++ D   LE           V + D  + L   I GL  ++    G+S+
Sbjct: 127 QIVADLEKLEESRLLSQDVLVVCETDKEVELPEEIAGLGIWKQKIYGISK 176


>gi|297155053|gb|ADI04765.1| hypothetical protein SBI_01644 [Streptomyces bingchenggensis BCW-1]
          Length = 257

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LPR ++R    +LDLG G G   L  L   P     G+DIS  AL  A++ A   G
Sbjct: 41  LEVGLPRGDER----VLDLGCGGGEWLLRALSAQPKVHAEGIDISEPALVDARAAAERLG 96

Query: 146 VSER--FDTLQSDWFSSVEGLFDVIVS 170
           V++R      ++D FSS    FD+++S
Sbjct: 97  VADRLVLHQQEADGFSSRHS-FDLVLS 122


>gi|194017567|ref|ZP_03056178.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC
           7061]
 gi|194010839|gb|EDW20410.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC
           7061]
          Length = 228

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L+L  E        +D++ +A+E++K NA  N V +     QSD FS+
Sbjct: 89  ILDVGCGYGPIGLSLANEMTSRTIHMIDVNERAVELSKENAKHNRV-DNVRIYQSDLFSN 147

Query: 161 VE--GLFDVIVSNPP 173
           V     F  I++NPP
Sbjct: 148 VHSSAAFASILTNPP 162


>gi|123443996|ref|YP_001007966.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|166223501|sp|A1JRL5|PRMA_YERE8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|122090957|emb|CAL13839.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 293

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAQ 268


>gi|313898203|ref|ZP_07831741.1| methyltransferase small domain protein [Clostridium sp. HGF2]
 gi|312956967|gb|EFR38597.1| methyltransferase small domain protein [Clostridium sp. HGF2]
          Length = 203

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G V +   K  P  +   VD++ +A+E+A+ NA  N +        SD + 
Sbjct: 62  QLLDMGCGYGVVGIVTKKAWPDKQVEMVDVNPRAVELARDNAEKNNIEANIHV--SDVYE 119

Query: 160 SVEG-LFDVIVSNPP 173
            V G  F  I++NPP
Sbjct: 120 QVSGNTFTDIITNPP 134


>gi|283457419|ref|YP_003361995.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
 gi|283133410|dbj|BAI64175.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
          Length = 618

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 16/119 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ 147
           E+  V R LD+GTG G     LL  +        DIS +AL  A+ N + N  +      
Sbjct: 215 ERTPVKRALDVGTGCGIQTFHLLAHAEHV--TATDISERALAFARFNLLLNAQALNIDPQ 272

Query: 148 ---ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               R    +      V G LFD++VSNPP++ +  V     E   F  R   DGG+ G
Sbjct: 273 NPQARVSLREGSLLEPVAGELFDLVVSNPPFVITPRVAGESAE-EQFTYR---DGGLPG 327


>gi|71909548|ref|YP_287135.1| ribosomal protein L11 methyltransferase [Dechloromonas aromatica
           RCB]
 gi|123626321|sp|Q478R6|PRMA_DECAR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|71849169|gb|AAZ48665.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 296

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 9/77 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +   +LD G G+G + +A  +      G   GVDI  +A+E A++NA  NGV+  F    
Sbjct: 164 EACTVLDYGCGSGILAIAAAR---LGAGHVAGVDIDPQAVEAARANAERNGVTALF---- 216

Query: 155 SDWFSSVEGLFDVIVSN 171
           +D  + V G +DV+V+N
Sbjct: 217 ADSATPVAGEYDVVVAN 233


>gi|14590965|ref|NP_143040.1| RNA methyltransferase [Pyrococcus horikoshii OT3]
 gi|50401321|sp|O58864|Y1137_PYRHO RecName: Full=Uncharacterized RNA methyltransferase PH1137
 gi|3257554|dbj|BAA30237.1| 407aa long hypothetical RNA methyltransferase [Pyrococcus
           horikoshii OT3]
          Length = 407

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+ +G G   + L K    FK VG D +  A+E+A+ NA  N V   FD + +D   
Sbjct: 274 RVLDMYSGVGTFGIYLAKRG--FKVVGFDSNEFAIEMARKNAKINKVDAVFD-VATDREV 330

Query: 160 SVEGLFDVIVSNPPYI 175
            V G FD ++ +PP +
Sbjct: 331 EVNG-FDTVIVDPPRV 345


>gi|328865954|gb|EGG14340.1| hypothetical protein DFA_12110 [Dictyostelium fasciculatum]
          Length = 707

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 16/139 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126
           D +EP  ++ L ++ AL   L  ++  +   ++++G+G+G V   L   L+ + +F  + 
Sbjct: 26  DVYEPAQDSYLFIN-ALKKDLDDLKLLNPSFVIEIGSGSGFVISYLAKILENNGYF--MS 82

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCL 183
            DI+  A  ++   A  N VS   D + + + + +E   G  DV++ NPPY+ +      
Sbjct: 83  TDINPIAARVSSRTATHNNVS--LDVINTSFLTGIERVKGKVDVLLFNPPYVPTE----- 135

Query: 184 GLEVRDFDPRISLDGGIDG 202
             E+ D     S  GGIDG
Sbjct: 136 SEEIEDGGIAASWAGGIDG 154


>gi|268594824|ref|ZP_06128991.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02]
 gi|268596794|ref|ZP_06130961.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268603724|ref|ZP_06137891.1| methyltransferase [Neisseria gonorrhoeae PID1]
 gi|268682195|ref|ZP_06149057.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684346|ref|ZP_06151208.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268548213|gb|EEZ43631.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02]
 gi|268550582|gb|EEZ45601.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268587855|gb|EEZ52531.1| methyltransferase [Neisseria gonorrhoeae PID1]
 gi|268622479|gb|EEZ54879.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624630|gb|EEZ57030.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|317164270|gb|ADV07811.1| hypothetical protein NGTW08_0843 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 135

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  A+L +      +G D + +A+  A++N    G  ++ +  ++D F   
Sbjct: 35  FDIGTGSG-VLAAILAKQGIPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP-- 91

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           EG  D+IV NPP + +       +E   +DP  ++
Sbjct: 92  EGFADLIVCNPPRLPAKPTSA--VESALYDPESAM 124


>gi|227538469|ref|ZP_03968518.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241655|gb|EEI91670.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 147

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L L +         V+I   A + AK N + +  SER    Q   
Sbjct: 37  AAHILDIGTGTGVIALMLAQRFENATLEAVEIDALAADRAKQNFLNSPFSERM-YAQHVS 95

Query: 158 FSSVEGL--FDVIVSNPPY 174
           F  +  +  +D+I+SNPP+
Sbjct: 96  FEDLHPVSKYDLIISNPPF 114


>gi|227486795|ref|ZP_03917111.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235265|gb|EEI85280.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 456

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 8/90 (8%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF L  I+K   + ILDL +GTG +    L  S      G++I  +A+E AK NA  NG+
Sbjct: 304 AFDLAEIDK--TMDILDLYSGTGTI--TQLMASVAKSATGIEIVEEAVEKAKENARINGL 359

Query: 147 SERFDTLQSDWFSSVEGL---FDVIVSNPP 173
            +  + L  D    +E +   +DV+V +PP
Sbjct: 360 -DNVNFLCGDVLEEIEKVGNKYDVVVLDPP 388


>gi|295702483|ref|YP_003595558.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium
           DSM 319]
 gi|294800142|gb|ADF37208.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium
           DSM 319]
          Length = 457

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 29/154 (18%)

Query: 41  AIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELLVDSAL 86
           +IV+++  +  + ILG      W + Y      +V+  +S+ +F +  PE T++L D AL
Sbjct: 244 SIVQNVNSKRTNVILGNQTNVLWGEEYIYDYIGDVKFAISAKSFYQVNPEQTKVLYDKAL 303

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ++    E+     ++D   G G + L L +++   K  GV+I  +A+E AK NA  NG+
Sbjct: 304 EYADLTGEET----VIDAYCGIGTISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGI 357

Query: 147 -SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173
            +  F+  +++     W+   +G+  DVIV +PP
Sbjct: 358 HNAEFEVGEAEVVIPNWYK--QGIKADVIVVDPP 389


>gi|217966763|ref|YP_002352269.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724]
 gi|217335862|gb|ACK41655.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724]
          Length = 395

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+   TG   L  LK     K V VD S  ALEIAK NA  NG  +R + ++ +
Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGAS-KVVAVDSSGIALEIAKENAKLNGFMDRIEFIEEN 275

Query: 157 WFSSV-----EGL-FDVIVSNPP 173
            F  +     EG  FDV++ +PP
Sbjct: 276 AFDLLRRFHKEGRSFDVVILDPP 298


>gi|154482642|ref|ZP_02025090.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC
           27560]
 gi|149736542|gb|EDM52428.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC
           27560]
          Length = 214

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG + + L  ++       ++I  ++ E+A+ + + N + +R   +  D   
Sbjct: 17  RALDLGTGTGIIPILLEAKTEGQDFEALEIQPESAEMARRSVMLNNLQDRIKIVDGDIKE 76

Query: 160 SVE----GLFDVIVSNPPYI 175
           + +      F+V+ +NPPY+
Sbjct: 77  ASKIFGAASFNVVTTNPPYM 96


>gi|145508435|ref|XP_001440167.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407373|emb|CAK72770.1| unnamed protein product [Paramecium tetraurelia]
          Length = 457

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ V I DLG GTG   + L KE  +   +GV+I  K +E+AK N   + V+   D + +
Sbjct: 143 KEFVIITDLGCGTGGNTVQLAKECHYV--IGVEIDSKFIELAKKNCQNSIVN--VDLINA 198

Query: 156 DWFSSVEGLFDVIVSNP 172
           D F+      DVI  NP
Sbjct: 199 DIFTLNNLQTDVIFVNP 215


>gi|37528084|ref|NP_931429.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|81418259|sp|Q7MZN0|RSMC_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|36787521|emb|CAE16624.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N2-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 338

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 4/139 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+HE       W + Y V   + +       + EL V S L  S    +K     +LD+ 
Sbjct: 147 LEHEVQFEQDNWWNSYQVENVIVNTLPGVFSQDELDVGSRLLLS--TFDKPLSGNLLDIA 204

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G G +   L K++P       D++  A  IA S A           + S+ +S++E  F
Sbjct: 205 CGAGVLAAVLGKKNPELALTLSDVNAAA--IASSKATLKANKLEGHVVVSNVYSNIEDKF 262

Query: 166 DVIVSNPPYIESVIVDCLG 184
           D I+SNPP+ E +    L 
Sbjct: 263 DWIISNPPFHEGLKTSLLA 281


>gi|15616937|ref|NP_240150.1| hypothetical protein BU328 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|25403592|pir||D84968 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039002|dbj|BAB13036.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 280

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +N  + +   + S+ +S+V   FD+I+SNPP+
Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214


>gi|219681691|ref|YP_002468077.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471384|ref|ZP_05635383.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624534|gb|ACL30689.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086639|gb|ADP66720.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087224|gb|ADP67304.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
          Length = 280

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +N  + +   + S+ +S+V   FD+I+SNPP+
Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214


>gi|168701079|ref|ZP_02733356.1| hypothetical protein GobsU_16247 [Gemmata obscuriglobus UQM 2246]
          Length = 466

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 31/156 (19%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL---------KHESIHRILGW---RDF 60
           R+  L SH  ++ P  VLDD + ++++N  V  L          H    RI      R  
Sbjct: 174 RLADLLSHLYVLVP--VLDDEKHYWVSNDEVEKLLRHGEGWLNSHPEKERIAERYLRRQS 231

Query: 61  YNVRLTLSS----DTFEP------------RPETEL-LVDSALAFSLPRIEKRDVVRILD 103
             VR  L++    DT EP            R E+ + L +  LA  L  ++     R+LD
Sbjct: 232 KLVRSVLAALDPNDTEEPAEALAAQDLAEERLESRVSLHEHRLATVLGALQATGATRVLD 291

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LG G G +   L  +  F + VGVD+S ++LEIA+ 
Sbjct: 292 LGCGEGKLLRLLAADPRFTEVVGVDVSVRSLEIARQ 327


>gi|156380522|ref|XP_001631817.1| predicted protein [Nematostella vectensis]
 gi|156218864|gb|EDO39754.1| predicted protein [Nematostella vectensis]
          Length = 215

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 10/192 (5%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDIS 130
           +EP  ++ L++D AL      + +      +++G+G+G +   L     P    +  DI+
Sbjct: 20  YEPAEDSFLMMD-ALEKDAQLLHEISPSVCVEVGSGSGVLITFLASITGPHSLYIATDIN 78

Query: 131 CKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            KA       A  NG  VS     L S  +S ++G  DV++ NPPY+ +        EV 
Sbjct: 79  AKAALCTTRTAKQNGCTVSAVVTDLLSSMYSRLKGKIDVLLFNPPYVATPTD-----EVA 133

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLV 247
               + S  GGI+G      +   VS  L+  G    V +  N+  D++   E   L   
Sbjct: 134 SEGIQASWAGGINGRQVTDRLLPVVSSLLSPKGCFYLVAVAENKPDDIICFLEKYGLHGE 193

Query: 248 NAFKDYGGNDRV 259
              +   G +R+
Sbjct: 194 TVLQRKAGCERL 205


>gi|229542299|ref|ZP_04431359.1| methyltransferase small [Bacillus coagulans 36D1]
 gi|229326719|gb|EEN92394.1| methyltransferase small [Bacillus coagulans 36D1]
          Length = 248

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL TG G + L LL      +  GV+I  +  ++AK +   NG+ +R   +  D   
Sbjct: 48  KVLDLCTGNGVIPL-LLSNRTKAEITGVEIQERLSDMAKRSVAYNGLEDRIRIIHGDLKE 106

Query: 160 SVEGL----FDVIVSNPPYIES 177
             + L    FDV+  NPPY  S
Sbjct: 107 MPDVLGCSKFDVVTCNPPYFPS 128


>gi|121534803|ref|ZP_01666623.1| ribosomal protein L11 methyltransferase [Thermosinus
           carboxydivorans Nor1]
 gi|121306598|gb|EAX47520.1| ribosomal protein L11 methyltransferase [Thermosinus
           carboxydivorans Nor1]
          Length = 312

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 85/211 (40%), Gaps = 49/211 (23%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILG---------------WRDFYNVRLTLSSDT 71
           D  LDD+ R F   A V  L    +++  G               W+++++         
Sbjct: 70  DDELDDKLRLF--EARVNELAQYQLNKGRGHIYWQEVQEEDWASSWKNYFHPVKVGEKIV 127

Query: 72  FEP------RPETELLV--DSALAFSLPRIEK--------RDVVR----ILDLGTGTG-- 109
            +P      + E E++V  D  +AF                DV++    + D+GTG+G  
Sbjct: 128 IKPSWEEYNQAEGEIIVELDPGMAFGTGTHHTTAMCIRILEDVIKPGDVVFDVGTGSGIL 187

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           AV  A L     +    VD+   A+ +A  NA  NGVS      Q D  +   G  DV+V
Sbjct: 188 AVVAAKLGAGAVY---AVDLDPVAVNVAVENASVNGVSHVVKVAQGDLLTGFTGTADVVV 244

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +N      +I D +   V+D  P+   +GG+
Sbjct: 245 AN------IIADVIIRLVKDV-PQKLKEGGV 268


>gi|332701731|ref|ZP_08421819.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay]
 gi|332551880|gb|EGJ48924.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay]
          Length = 320

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 16/91 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG G V L  L  +     VG++++ K+   A  NA   G+  R D  + D   
Sbjct: 38  RLLDLGTGCGPVALGWLLRNSEGSAVGLELNPKSAACAWENAARLGLETRLDVREGDVRD 97

Query: 160 SVEG----------------LFDVIVSNPPY 174
             +G                 FD++  NPPY
Sbjct: 98  VRKGGNKLAASGGSARLEPESFDLVACNPPY 128


>gi|327469054|gb|EGF14526.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK330]
          Length = 182

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYIESVIVDCLG-LEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY +  IV  LG LE R             D  + L   I GL 
Sbjct: 106 ALEMLTGAFDLVLLDPPYAKEQIVADLGKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|289706441|ref|ZP_06502799.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289556936|gb|EFD50269.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 215

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL  ++P    R     LD+G G G + L L   SP  +  GV+++ ++L +A+ NA  
Sbjct: 52  AALLSAVPAPPARGA--FLDVGAGWGPLALTLALASPEAEVTGVEVNERSLALARDNAAA 109

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPP 173
            G S  RF T +       +  FD++ SNPP
Sbjct: 110 VGASNARFLTPEQ---VPDDARFDLVWSNPP 137


>gi|260914552|ref|ZP_05921020.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325]
 gi|260631343|gb|EEX49526.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325]
          Length = 237

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 27/153 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ---S 155
           RILDLGTGTG + L L + S     +  V++   AL  A+ N   +  + +        +
Sbjct: 42  RILDLGTGTGLIALMLAQRSAEDCQISAVELDQAALLQAQENIQQSKWANKIHLYSQNIA 101

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D+ ++    FD+IV+NPPY                        GID  S  R +A     
Sbjct: 102 DFCTNTVDKFDLIVANPPYFPQ---------------------GIDCSSKQRNLARYTEN 140

Query: 216 --HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             HL+   L S  +    K+  V  FE+ ++ L
Sbjct: 141 LTHLDWLDLASQCVSAQGKISFVLPFEAGEILL 173


>gi|212709069|ref|ZP_03317197.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM
           30120]
 gi|212687981|gb|EEB47509.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM
           30120]
          Length = 348

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LDL  G G +   +  ++P       D+S  A++ A +    N ++ +   + SD +S
Sbjct: 210 NVLDLACGNGVLAAVVGTQNPAVTLTLSDVSASAIDSATATLAANNLTGKI--IPSDVYS 267

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGG 199
            ++  FD I+SNPP+ + +      +E   F  P+    GG
Sbjct: 268 DLDDKFDWIISNPPFHDGINTSYNAVETLIFQAPKYLKKGG 308


>gi|126649590|ref|ZP_01721831.1| RNA methyltransferase [Bacillus sp. B14905]
 gi|126593915|gb|EAZ87838.1| RNA methyltransferase [Bacillus sp. B14905]
          Length = 459

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)

Query: 41  AIVRSLKHESIHRILG------W-RDFY-----NVRLTLSSDTF-EPRPE-TELLVDSAL 86
           +I++++ HE  + I G      W +D       +VR  +S+ +F +  PE TE+L   AL
Sbjct: 246 SIMQNVNHEKTNVIFGDDTLNLWGKDVIIDTIGDVRFEISARSFYQVNPEQTEVLYKQAL 305

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ++  + ++R    ++D   G G + L L +++     +GV+I  +A+E AK NAV NG 
Sbjct: 306 DYANLQGDER----VIDAYCGIGTISLFLAQKAKAV--MGVEIVPQAIEDAKRNAVLNGF 359

Query: 147 SERF------DTLQSDWFSSVEGL-FDVIVSNPP 173
           +  +      + +   W+   EG   DV+V +PP
Sbjct: 360 TNTYFEAGPAEEVIPRWYK--EGKEADVLVVDPP 391


>gi|269126682|ref|YP_003300052.1| methylase [Thermomonospora curvata DSM 43183]
 gi|268311640|gb|ACY98014.1| methylase [Thermomonospora curvata DSM 43183]
          Length = 223

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 9/110 (8%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               + P+ +T LL ++     L +   R   R+LDL TGTG V +A  +     + V  
Sbjct: 6   PPGVYRPQGDTALLTEA-----LRQAPIRPGARVLDLCTGTGVVAMAAARAG-ARQVVAT 59

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
           D+S +A+  A+ NA   G+  R   L+ D    V G  FDVI +NPPY+ 
Sbjct: 60  DVSVRAVLAARLNARLRGLPIRV--LRGDLVEPVAGKHFDVITANPPYVP 107


>gi|240948849|ref|ZP_04753205.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305]
 gi|240296664|gb|EER47275.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305]
          Length = 233

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 97  DVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V RILD+GTG+G + L L  +     + + +++   A + A  N   +  + R   +  
Sbjct: 38  NVQRILDMGTGSGLIALMLGQRTEERCQIMALELEENAYQQAVENVKNSAWTARIKVIHG 97

Query: 156 DWF-SSVEGLFDVIVSNPPY 174
           D   +S    FD+IVSNPPY
Sbjct: 98  DVMNTSFLEKFDLIVSNPPY 117


>gi|119472218|ref|ZP_01614397.1| putative ribosomal RNA small subunit methyltransferase C
           [Alteromonadales bacterium TW-7]
 gi|119445036|gb|EAW26331.1| putative ribosomal RNA small subunit methyltransferase C
           [Alteromonadales bacterium TW-7]
          Length = 341

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   L  ++   + V  D+S  A          NGV+   + + SD   
Sbjct: 206 KVLDFGCGAGLIATFLGLKNTALEFVCSDVSALATYATTQTLKLNGVTG--EAILSDGLK 263

Query: 160 SVEGLFDVIVSNPPYIESVIVD 181
           ++ G FD+IVSNPP+   +  D
Sbjct: 264 NISGKFDLIVSNPPFHTGIATD 285


>gi|326381335|ref|ZP_08203029.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199582|gb|EGD56762.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395]
          Length = 231

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 8/98 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS--CKALEIAKSNAVTNGVSER 149
           R+  R   R+LD+GTGTG + L +  E P    +GVD           K++    G S R
Sbjct: 53  RLALRTDDRVLDIGTGTGELALRIAVEHPDVHVIGVDPDPLALRRARRKAHRRGAGDSTR 112

Query: 150 FDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVD 181
           FD    D     +G FD +VS       PP  +  ++D
Sbjct: 113 FDLGYGDRLDYADGSFDCVVSAFAYHHLPPEAQHALLD 150


>gi|312137231|ref|YP_004004568.1| methylase [Methanothermus fervidus DSM 2088]
 gi|311224950|gb|ADP77806.1| methylase [Methanothermus fervidus DSM 2088]
          Length = 195

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 22/143 (15%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V  DI+  A++ AK NA  N V +    L+ + F  +   F+ I+ NPPY+ +     L 
Sbjct: 59  VATDINPYAIQCAKKNAQINSV-KNIKFLEGNLFEPINEKFNTILFNPPYLPTEDFKELK 117

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDV----- 235
            E+      ++ DGG +G          V ++L  DG    + S     N+ +D+     
Sbjct: 118 DEL-----CLAWDGGSNGRKIIDRFLKEVDKYLKPDGKIQLVQSSLSNPNKTIDILERKG 172

Query: 236 --VRIFESRKLF-----LVNAFK 251
             V I  S+KLF     ++ AFK
Sbjct: 173 FEVEITASKKLFFEELLVITAFK 195


>gi|159039802|ref|YP_001539055.1| methyltransferase small [Salinispora arenicola CNS-205]
 gi|157918637|gb|ABW00065.1| methyltransferase small [Salinispora arenicola CNS-205]
          Length = 201

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +   L   +P      VD++ +A E+   NA   G + R   ++ D  +
Sbjct: 64  QLLDLGCGFGPITCVLATSAPSATVWAVDVNARARELTTVNAARVGAAGRVRVVEPDAVA 123

Query: 160 SVEGLFDVIVSNPP 173
           +    FD I SNPP
Sbjct: 124 AAV-TFDQIWSNPP 136


>gi|197120676|ref|YP_002132627.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
 gi|220915388|ref|YP_002490692.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196170525|gb|ACG71498.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
 gi|219953242|gb|ACL63626.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 287

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +LD+GTG+G + +A  K     +  G D    A+ +A+ NA  NGV E    
Sbjct: 144 LAARPGASVLDVGTGSGLLAIAARKLG-AGRVTGNDNDPVAVAVARENAARNGVPEV--A 200

Query: 153 LQSDWFSSVEGLFDVIVSN 171
           L  D   ++ G FDV+V+N
Sbjct: 201 LTEDALPAIGGAFDVVVAN 219


>gi|114326872|ref|YP_744029.1| ribosomal protein L11 methyltransferase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315046|gb|ABI61106.1| ribosomal protein L11 methyltransferase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 308

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 8/79 (10%)

Query: 100 RILDLGTGTGAVCLA---LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R++DLGTG+G + +A   L+K  P  + +  DI   ++  A+ NAV N VS + D L SD
Sbjct: 155 RVIDLGTGSGILAMAAARLIKPHPV-RVMAADIEPWSVRTAQQNAVLNRVSRQLDCLVSD 213

Query: 157 WFS----SVEGLFDVIVSN 171
            +          +D+I +N
Sbjct: 214 GWKRRPIRARAPYDLIFAN 232


>gi|26990482|ref|NP_745907.1| hypothetical protein PP_3777 [Pseudomonas putida KT2440]
 gi|24985456|gb|AAN69371.1|AE016574_3 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 279

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+GTG+G   L LL++         DIS  A++ A++N + N      + +Q D F
Sbjct: 60  ARFLDVGTGSGVHAL-LLRQLGMRHITACDISVDAVQAARANELVNLGESCIEFVQGDLF 118

Query: 159 SSV---EGLFDVIVSNPP 173
            ++   E  +DVI+ NPP
Sbjct: 119 DAMPAAEDGYDVILFNPP 136


>gi|251794055|ref|YP_003008786.1| methyltransferase small [Paenibacillus sp. JDR-2]
 gi|247541681|gb|ACS98699.1| methyltransferase small [Paenibacillus sp. JDR-2]
          Length = 231

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I KR   RILDL TG G + + LL      +   V+I  +  ++A+ + 
Sbjct: 34  LDAVLLSKFATIPKRG--RILDLCTGNGVIPM-LLTTRTDARIDAVEIQPRLADMARRSV 90

Query: 142 VTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYI 175
             N +SE+   ++ D       +  G++D +  NPPY+
Sbjct: 91  AMNNLSEQVSIIEGDLKIFMKEAGNGIYDAVTVNPPYM 128


>gi|238753930|ref|ZP_04615290.1| Methyltransferase small [Yersinia ruckeri ATCC 29473]
 gi|238707918|gb|EEQ00276.1| Methyltransferase small [Yersinia ruckeri ATCC 29473]
          Length = 259

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           R+LD+G G+G + L +  + SP  +  GV++   A   A  NA  +   +R     +D  
Sbjct: 61  RVLDIGCGSGLIALMIAQRSSPQVQIDGVELENDAAAQASENAQASPWRDRIQIYATDVH 120

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180
            +  +    +D+IVSNPPY    + 
Sbjct: 121 EFAKTHVHQYDLIVSNPPYFAPAVA 145


>gi|315641380|ref|ZP_07896455.1| type I restriction-modification system DNA-methyltransferase
           [Enterococcus italicus DSM 15952]
 gi|315482873|gb|EFU73394.1| type I restriction-modification system DNA-methyltransferase
           [Enterococcus italicus DSM 15952]
          Length = 535

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 17/140 (12%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKG 124
           + + + P+P +EL+   A+       E +    + D   G+G++ L + +   E  F   
Sbjct: 194 AGEFYTPQPISELMTRIAIDGK----EDQKGFSVYDPTMGSGSLLLNVRRFSNEKGFINY 249

Query: 125 VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            G +++     +A+ N + +GV          DTL  DW +     FD ++ NPPY    
Sbjct: 250 FGQELNTSTFNLARMNMILHGVDSANQHLRNGDTLDGDWPTEEPTNFDAVLMNPPYSAKW 309

Query: 179 IVDCLGLEVRDFDPRISLDG 198
             +   L+    DPR S+ G
Sbjct: 310 SGEKGFLD----DPRFSMYG 325


>gi|311086067|gb|ADP66149.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
          Length = 280

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +N  + +   + S+ +S+V   FD+I+SNPP+
Sbjct: 184 NSNKFNGK--IVYSNLYSNVFKKFDLIISNPPF 214


>gi|315604446|ref|ZP_07879512.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315314152|gb|EFU62203.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 204

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQS 155
           +LDLG G G +   +  E+P  +   VD++ +A+++   NA  NG S     +  + L  
Sbjct: 63  LLDLGCGWGPLATVMSLEAPRCEVWAVDVNSRAVDLTARNAAANGASGVRALKACEALAE 122

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S+    FDVI SNPP
Sbjct: 123 SVRSAT--FFDVIWSNPP 138


>gi|206577582|ref|YP_002237081.1| putative methyltransferase [Klebsiella pneumoniae 342]
 gi|262828515|sp|B5XNG1|TRMN6_KLEP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|206566640|gb|ACI08416.1| putative methyltransferase [Klebsiella pneumoniae 342]
          Length = 245

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V  +LD+G G+G + L L + +     V  V++  +A   A+ NA+ +  S R +  Q+D
Sbjct: 45  VKHVLDIGAGSGLLALMLAQRTDHDVQVDAVELDEEAAAQARENALASPWSSRIEVCQAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYI 175
              W  S    +++I+SNPP+ 
Sbjct: 105 IHQWQPSQTRRYELIISNPPFF 126


>gi|323492022|ref|ZP_08097187.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
 gi|323313751|gb|EGA66850.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
          Length = 340

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111
           W   Y V    S+ T +  P      E  + S L   +LP ++ +    +LD G G G +
Sbjct: 159 WYKTYQVSYKESTLTIKSLPGVFSHGEFDIGSKLLLDTLPELKGK----VLDFGCGAGVI 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +   +P  +    DIS  A+  +++    NG++ R     SD +S     +D I+SN
Sbjct: 215 GSVMALLNPTIELEMCDISALAVASSQATLAANGLTGR--VFASDVYSDTSKDYDYIISN 272

Query: 172 PPY 174
           PP+
Sbjct: 273 PPF 275


>gi|262831299|sp|B2RK25|TRMN6_PORG3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 255

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160
           LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  S+R      D   SS
Sbjct: 46  LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 105

Query: 161 VEGL-----FDVIVSNPPYIES 177
           +E L     FD+IVSNPP+ +S
Sbjct: 106 LESLIGNQRFDLIVSNPPFFKS 127


>gi|188995065|ref|YP_001929317.1| hypothetical protein PGN_1201 [Porphyromonas gingivalis ATCC 33277]
 gi|188594745|dbj|BAG33720.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 236

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160
           LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  S+R      D   SS
Sbjct: 27  LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 86

Query: 161 VEGL-----FDVIVSNPPYIES 177
           +E L     FD+IVSNPP+ +S
Sbjct: 87  LESLIGNQRFDLIVSNPPFFKS 108


>gi|320174522|gb|EFW49658.1| putative enzyme [Shigella dysenteriae CDC 74-1112]
          Length = 378

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAFSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|320164607|gb|EFW41506.1| cyclopropane-fatty-acyl-phospholipid synthase [Capsaspora
           owczarzaki ATCC 30864]
          Length = 444

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRL------TLSSDTFEPRPETELLVDSALAF 88
           R+ +TN+   SL +   H  LG  DFY + L         +    P+   E    + +  
Sbjct: 134 RWLMTNSPSLSLANVQAHYDLG-NDFYQLWLDKDFMAYTCALYLTPKDTLEKAQANKIHL 192

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            + +++ +   R+LDLG G G + L   ++    + + V++S + +E A+  A   G+S 
Sbjct: 193 IIKKLQLKQTDRLLDLGCGWGGLALEAARKVG-CRVLAVNLSKEQIEFARKQAAKEGLSH 251

Query: 149 RFDTLQSDWFS---SVEGLFDVIVS 170
             +   +D+ +     +GLFD I S
Sbjct: 252 LCEFRHADYRTINPEADGLFDKISS 276


>gi|315179239|gb|ADT86153.1| methyltransferase [Vibrio furnissii NCTC 11218]
          Length = 239

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
            ILD+GTGTG + L   +  P      VDI   A   A  N   +  + R    Q +   
Sbjct: 45  HILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSSWANRIQVAQQNILQ 104

Query: 159 SSVEGLFDVIVSNPPY 174
           + +    D I+ NPPY
Sbjct: 105 TQLNTPVDAIICNPPY 120


>gi|313904109|ref|ZP_07837489.1| type I restriction-modification system, M subunit [Eubacterium
           cellulosolvens 6]
 gi|313471258|gb|EFR66580.1| type I restriction-modification system, M subunit [Eubacterium
           cellulosolvens 6]
          Length = 531

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           E +  +++ D   G+G++   C     E  F K  G ++      +A+ N   +G+    
Sbjct: 214 ENKKGLQVYDPCMGSGSLMLSCKNYSTEPDFIKYYGQELMPSTYNLARMNMFLHGILPEN 273

Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +  E  FDV+  NPPY
Sbjct: 274 QHLRNGDTLDADWPTDEETEFDVVTMNPPY 303


>gi|269468793|gb|EEZ80397.1| 16S RNA G1207 methylase RsmC [uncultured SUP05 cluster bacterium]
          Length = 196

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PR      +D      L  ++ ++  + LDLG G G + LA+ K  P  +   VD   
Sbjct: 34  FSPRA-----IDEGTQLFLKHVDIQESDKCLDLGCGYGPIGLAVAKSCPRGEVHMVDKDF 88

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPP 173
            A+E++ +NA  N  +     L SD FS+V     FD ++SN P
Sbjct: 89  IAVELSNTNAKLNNTNNAQAYL-SDAFSAVGKTDYFDQVLSNVP 131


>gi|268326391|emb|CBH39979.1| conserved hypothetical membrane protein, methyltransferase family
           [uncultured archaeon]
          Length = 257

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA----LEIAKSNAVTNGVSER--FDTL 153
           + LD+GTG+GA  + + K+    K  G+D   KA    L++ ++NA T GV ER  F   
Sbjct: 90  KALDIGTGSGACAIKVAKKFRNSKVTGIDYWGKAWNYSLKVCENNAATEGVGERTNFQKA 149

Query: 154 QSDWFSSVEGLFDVIVSN 171
            +      +G FDV VSN
Sbjct: 150 SAADLPFDDGEFDVAVSN 167


>gi|149190657|ref|ZP_01868925.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1]
 gi|148835540|gb|EDL52509.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1]
          Length = 293

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLAGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AAKVIGIDIDPQALTASKDNAERNGVADQLELFLPQ--NQPEGLIADVVVAN 231


>gi|154250324|ref|YP_001411149.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1]
 gi|154154260|gb|ABS61492.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1]
          Length = 247

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 5/83 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+G + + L K+    + + VD    A+E+A  NA  N V    +   SD FS+
Sbjct: 123 VLDLGCGSGILGI-LAKKLGANRVLAVDNDPLAVEVAMENAERNKVD--IEVRLSDLFSN 179

Query: 161 VEGLFDVIVSNPPYIESVIVDCL 183
           V+G FD+IVSN   I  ++V+ L
Sbjct: 180 VDGKFDIIVSN--IIAEILVEML 200


>gi|284037300|ref|YP_003387230.1| methyltransferase small [Spirosoma linguale DSM 74]
 gi|283816593|gb|ADB38431.1| methyltransferase small [Spirosoma linguale DSM 74]
          Length = 248

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-- 155
           V+ +LD+GTGTG + L + + +P      V++   A   A  N   +  + R   +QS  
Sbjct: 40  VINLLDIGTGTGLLALMVAQRNPMASIDAVEVDDAAYSQAIQNVGASPFANRIQVMQSRI 99

Query: 156 -DWFSSVEGLFDVIVSNPPY 174
            D+  ++   +D I++NPP+
Sbjct: 100 QDYRPAIR--YDRILTNPPF 117


>gi|163753132|ref|ZP_02160256.1| putative RNA methyltransferase [Kordia algicida OT-1]
 gi|161326864|gb|EDP98189.1| putative RNA methyltransferase [Kordia algicida OT-1]
          Length = 237

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 14/149 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+G GTG + L L +         ++I   A E A  N   +  S+R     +   ++
Sbjct: 41  ILDIGAGTGLIALQLAQRCHAEVIDAIEIDAAAYEQAVDNFENSPWSDRLFCYHAGLDEF 100

Query: 158 FSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +E  +D+IVSNPP Y E+   +    +   F          D L  +  +  GV++ 
Sbjct: 101 VDEIEDTYDLIVSNPPFYTENYKTESAQRDTARF---------TDALP-FSALLSGVAKL 150

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L   G     I + +    + + ++ KLF
Sbjct: 151 LAPTGTFHTIIPFKEHEHFINLAKANKLF 179


>gi|119585530|gb|EAW65126.1| HemK methyltransferase family member 1, isoform CRA_b [Homo
           sapiens]
          Length = 129

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGT 106
            +  ILG  DF  + L +    F PRPETE LV+  L     R   +       IL++G 
Sbjct: 2   PVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGC 61

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           G+GA+ L+LL + P  + + VD    A+ +   NA
Sbjct: 62  GSGAISLSLLSQLPQSRVIAVDKREAAISLTHENA 96


>gi|71906159|ref|YP_283746.1| methyltransferase small [Dechloromonas aromatica RCB]
 gi|71845780|gb|AAZ45276.1| Methyltransferase small [Dechloromonas aromatica RCB]
          Length = 384

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G +  A+L      + V  D   +AL  A  N    G++     +++D F   E
Sbjct: 211 DIGTGSG-IIAAVLARRGVAQIVATDQDARALACAGENIEQLGLAAAVRIVKADLFP--E 267

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           G   ++V NPP++ +     +   V D D R+ L G + GL+ +  +ADG
Sbjct: 268 GKAPLVVCNPPWLPAQPTSPVEYAVYDPDSRM-LRGFLAGLAAH--LADG 314


>gi|289577354|ref|YP_003475981.1| methyltransferase small [Thermoanaerobacter italicus Ab9]
 gi|289527067|gb|ADD01419.1| methyltransferase small [Thermoanaerobacter italicus Ab9]
          Length = 248

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG GTG + + +  ++      GV+I     ++A  + V N + +R   +Q D   
Sbjct: 45  KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINNMEKRIKIIQGDVRG 104

Query: 160 SVEGL----FDVIVSNPPYI 175
             + L    FD++ SNPPY+
Sbjct: 105 IEKTLGYEKFDIVTSNPPYM 124


>gi|118581364|ref|YP_902614.1| ribosomal protein L11 methyltransferase [Pelobacter propionicus DSM
           2379]
 gi|166223426|sp|A1AT86|PRMA_PELPD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|118504074|gb|ABL00557.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Pelobacter
           propionicus DSM 2379]
          Length = 309

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG+G + +A ++     + V VDI  +A+E+A+ N   N ++++ +   +    +
Sbjct: 174 VLDLGTGSGILAMAAVRLG-AGRVVAVDIDPQAVEVARENLALNDLTDQVEC-DTTPLEA 231

Query: 161 VEGLFDVIVSN 171
           + G FDVI++N
Sbjct: 232 LPGTFDVILAN 242


>gi|34540837|ref|NP_905316.1| hypothetical protein PG1104 [Porphyromonas gingivalis W83]
 gi|81833778|sp|Q7MVG0|TRMN6_PORGI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|34397151|gb|AAQ66215.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 255

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SS 160
           LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  S+R      D   SS
Sbjct: 46  LDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPFSDRIVIASGDILDSS 105

Query: 161 VEGL-----FDVIVSNPPYIES 177
           +E L     FD+IVSNPP+ +S
Sbjct: 106 LESLIGNQRFDLIVSNPPFFKS 127


>gi|296171937|ref|ZP_06852982.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295893870|gb|EFG73642.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 249

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG G    A+   +  +   G+D S  ALE A+ NA   GVS  F+   +     
Sbjct: 53  VLDPGTGPG--HHAIYYAAKGYSATGIDGSPGALERARENARRAGVSVNFELADATRLEG 110

Query: 161 VEGLFDVIV 169
           +EG FD +V
Sbjct: 111 LEGRFDTVV 119


>gi|227328588|ref|ZP_03832612.1| hypothetical protein PcarcW_15134 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 248

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             RILD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R      D
Sbjct: 48  ATRILDIGSGSGLLALMLAQRSEPRVQIDAVELDRAASDQAKENVAASPWADRITVYAED 107

Query: 157 WFSSVE---GLFDVIVSNPPY 174
             S  E     + +I+SNPPY
Sbjct: 108 IVSFAETRAADYSLIISNPPY 128


>gi|91977843|ref|YP_570502.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB5]
 gi|123357306|sp|Q133Y8|PRMA_RHOPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91684299|gb|ABE40601.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisB5]
          Length = 295

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDLGTGTG + +A  K    P       DI  +++ +AK NA  NGV    + + +  F
Sbjct: 157 VLDLGTGTGVLAIAAAKALRQPVL---ATDIDRQSVAVAKENARLNGVGNLVEAVHATGF 213

Query: 159 S----SVEGLFDVIVSN 171
           S    +  G FD++++N
Sbjct: 214 SAPVFAAWGPFDLVLAN 230


>gi|86141701|ref|ZP_01060225.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831264|gb|EAQ49720.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis
           MED217]
          Length = 222

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           ILD+GTGTG + L L +         +++   A E A  N   +   +R     +  +  
Sbjct: 23  ILDIGTGTGVIALMLAQRCDAELVDALELDEDAYEQAVDNFEASPWGDRLFCYHAHLYEF 82

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT------IAD 211
            + +E  +D+I  NPP+ E               P+    G     + +        +  
Sbjct: 83  ATEIEDTYDLITCNPPFFEGNA------------PQAEQQGSAREQARFEESMPFELLVA 130

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ LN DG+ SV I YN++ + + +     LF
Sbjct: 131 SVNQLLNPDGIFSVVIPYNREQEFIDLAARGNLF 164


>gi|332280097|ref|ZP_08392510.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332102449|gb|EGJ05795.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 414

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 268 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 327

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 328 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 358


>gi|312963653|ref|ZP_07778134.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6]
 gi|311282162|gb|EFQ60762.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCIEGDV 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDVIV++PP +I+           R  D +       +G   YR + 
Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDMK-------NGEGAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R L+KDG+     CS+ +
Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343


>gi|138893706|ref|YP_001124159.1| methyltransferase [Geobacillus thermodenitrificans NG80-2]
 gi|196250749|ref|ZP_03149436.1| methyltransferase small [Geobacillus sp. G11MC16]
 gi|134265219|gb|ABO65414.1| Methyltransferase [Geobacillus thermodenitrificans NG80-2]
 gi|196209699|gb|EDY04471.1| methyltransferase small [Geobacillus sp. G11MC16]
          Length = 249

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +I+DL TG G + L L + +   KG  +G++I  +  ++A+ +   NG+ E+ + +  D 
Sbjct: 48  QIVDLCTGNGVIPLLLSQRT---KGTIIGIEIQERLCDMARRSIQYNGLEEQIEIIHGDI 104

Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183
             + + +    +DV+  NPPY  +   D L
Sbjct: 105 KEAPQQIGYSRYDVVTCNPPYFPTAGQDEL 134


>gi|116753598|ref|YP_842716.1| putative methylase [Methanosaeta thermophila PT]
 gi|116665049|gb|ABK14076.1| putative methylase [Methanosaeta thermophila PT]
          Length = 185

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 23/179 (12%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D + P  +T LL+ +A++      E      ++++G G+G +  +L+ +      +  DI
Sbjct: 3   DVYPPSEDTYLLMRAAIS------EASAGDSVIEIGCGSGVISASLIGKVRSI--LATDI 54

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +  A+  A S  +          +++D F  +   FD+I+ NPPY+ +      GL++  
Sbjct: 55  NPHAVRAAASLGIP--------AVRADLFHGINSKFDLILFNPPYLPTED----GLDLNP 102

Query: 190 FDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            D R    +LDGG DG         GV   ++  G   + I     +D V+    R  F
Sbjct: 103 EDDRWLSTALDGGADGREVIERFLKGVKNIMSPRGRLLLLISSLTGLDEVQELARRSGF 161


>gi|268318254|ref|YP_003291973.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
 gi|262335788|gb|ACY49585.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
          Length = 274

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR+LD GTG G     + +  P  + VGVD+    LE A+       V+ R    Q D  
Sbjct: 55  VRVLDAGTGFGQYAYYIARRYPRAEVVGVDLKTDYLEQARRFVARTPVAGRVRFAQDDLT 114

Query: 159 S-SVEGLFDVIVS 170
               EG FD+I+S
Sbjct: 115 RLQTEGPFDLILS 127


>gi|229593165|ref|YP_002875284.1| hypothetical protein PFLU5795 [Pseudomonas fluorescens SBW25]
 gi|229365031|emb|CAY53198.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGVAEKMTCIEGDV 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDVIV++PP +I+           R  D +       +G   YR + 
Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDMK-------NGEGAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R L+KDG+     CS+ +
Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343


>gi|239918671|ref|YP_002958229.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus
           luteus NCTC 2665]
 gi|281415112|ref|ZP_06246854.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus
           luteus NCTC 2665]
 gi|239839878|gb|ACS31675.1| ubiquinone/menaquinone biosynthesis methyltransferase [Micrococcus
           luteus NCTC 2665]
          Length = 247

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            R+LDL TGTG +   +LK+ P  + VG DI+ + +E+ ++ A
Sbjct: 64  ARVLDLATGTGDLAFEVLKQHPDAQVVGADIAAEMMEVGRARA 106


>gi|313888904|ref|ZP_07822564.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845077|gb|EFR32478.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 301

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 4/92 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R  K+D   I D+G G+G + +A LK     + + VDI  K ++ +  NA  N + ++
Sbjct: 157 LERYVKKDD-EIFDIGCGSGILAIAGLKLGAK-RALAVDIDDKCIDASHENADLNNLEDK 214

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            D  + +    V+G  D+IVSN   I  +IVD
Sbjct: 215 MDIKKGNLLDVVKGRADLIVSN--IIAEIIVD 244


>gi|283781143|ref|YP_003371898.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068]
 gi|283439596|gb|ADB18038.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068]
          Length = 352

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG GTG   +ALL++ P  + + +D   + L+++   A   GV++R + L  D FS+
Sbjct: 187 LLDLGGGTGIYSIALLRKYPQLRAIVLD-RPEVLKVSHEFAEQYGVADRLELLAGDMFSA 245

Query: 161 V--EGLFDVIVSN 171
               G+  V++SN
Sbjct: 246 ALPAGVDRVLLSN 258


>gi|261250290|ref|ZP_05942866.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
 gi|260939406|gb|EEX95392.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
          Length = 340

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111
           W   Y V    +S T +  P      E  + S L   +LP +  +    +LD G G G +
Sbjct: 159 WFKSYQVSYKETSLTIKSLPGVFSHGEFDIGSKLLLDTLPALSGK----VLDFGCGAGVI 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +   +P  +    DIS  A+E +K+    NG+S R     SD +S     +  I+SN
Sbjct: 215 GSVMAILNPEIELEMCDISALAVESSKATLAANGLSGR--VFASDIYSDTSNDYHFIISN 272

Query: 172 PPY 174
           PP+
Sbjct: 273 PPF 275


>gi|311070753|ref|YP_003975676.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942]
 gi|310871270|gb|ADP34745.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942]
          Length = 201

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++S   F  P  E       LD+G G G + L+L  +        +D++ +A+E++
Sbjct: 46  SRLLIES---FEEPEAEGD----FLDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
             NA  NG+ E     QSD FS+V+    F  I++NPP
Sbjct: 99  NENAEHNGI-ENVRIYQSDLFSNVDSAQTFASIITNPP 135


>gi|302036312|ref|YP_003796634.1| hypothetical protein NIDE0946 [Candidatus Nitrospira defluvii]
 gi|300604376|emb|CBK40708.1| conserved protein of unknown function, putative SAM-dependent
           methyltransferase [Candidatus Nitrospira defluvii]
          Length = 373

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           V   D+GTGTG V  A+L        V  D   +AL  A+ N     + +R + +Q+D F
Sbjct: 196 VLAFDIGTGTG-VLAAVLARRGVSHIVATDQDPRALACARENLARLELIDRVEVVQADLF 254

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              EG   +++ NPP++ +     +   + D + R+ L G ++GL+ +
Sbjct: 255 P--EGKAPLVLCNPPWVPARPTSPIEQAIYDPECRM-LTGFLNGLAAH 299


>gi|239983770|ref|ZP_04706294.1| putative methyltransferase [Streptomyces albus J1074]
 gi|291455575|ref|ZP_06594965.1| methyltransferase [Streptomyces albus J1074]
 gi|291358524|gb|EFE85426.1| methyltransferase [Streptomyces albus J1074]
          Length = 293

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 31/58 (53%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            RILDLG GTGA   ALL + P  +   VD S   L      A   G+++R  T+++D
Sbjct: 57  TRILDLGCGTGAGTFALLGQFPEARVTAVDTSAAHLRRLDEKARERGLADRVRTVEAD 114


>gi|84683977|ref|ZP_01011879.1| hypothetical protein 1099457000262_RB2654_16051 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667730|gb|EAQ14198.1| hypothetical protein RB2654_16051 [Rhodobacterales bacterium
           HTCC2654]
          Length = 253

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +PR      VD    F    +   D   +LDLG G GA  L L    P  + VGV+   
Sbjct: 21  MQPRDGYRAGVDPV--FLAASVAAHDGESVLDLGCGAGAAGLCLATRVPGIRLVGVERQA 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPY 174
              ++A+ N+  N +    D ++   SD  S V E  +D ++ NPPY
Sbjct: 79  DYADLARKNSFDNDID--MDVVEADISDLPSEVKEESYDHVIMNPPY 123


>gi|319654859|ref|ZP_08008934.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2]
 gi|317393422|gb|EFV74185.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2]
          Length = 200

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L   K  P      VD++ +AL +AK NA  NG+ +     +SD   +
Sbjct: 62  ILDVGCGYGPIGLTAAKLMPERTVHMVDVNERALGLAKENAELNGI-KNVQIYESDRLEN 120

Query: 161 VEG-LFDVIVSNPP 173
            +G  F  I++NPP
Sbjct: 121 TKGNKFAAILTNPP 134


>gi|315037605|ref|YP_004031173.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112]
 gi|312275738|gb|ADQ58378.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112]
 gi|327182901|gb|AEA31348.1| Methyltransferase small [Lactobacillus amylovorus GRL 1118]
          Length = 206

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P      VD++ + L +A+ NA  N +S   D   SD ++ 
Sbjct: 67  ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQ 125

Query: 161 VEG--LFDVIVSNPP 173
           V+    F +I++NPP
Sbjct: 126 VDNDKKFGLILTNPP 140


>gi|213024661|ref|ZP_03339108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 83

 Score = 41.6 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSH 205
           LQS WFS++ G  FD+IVSNPPYI++        +VR F+PR +L   + G+  L+H
Sbjct: 27  LQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVR-FEPRSALVADENGMADLTH 82


>gi|145636309|ref|ZP_01791978.1| phosphatidylserine synthase [Haemophilus influenzae PittHH]
 gi|145270474|gb|EDK10408.1| phosphatidylserine synthase [Haemophilus influenzae PittHH]
          Length = 232

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A++ A+ N   +    R   +Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  +    FD+IV+NPPY E  I 
Sbjct: 99  FLQTTAQTFDLIVANPPYFEQGIA 122


>gi|18976623|ref|NP_577980.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638]
 gi|18892190|gb|AAL80375.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ T TG  A+  A+         + +D S +A+E AK NA  NGV +R   +    
Sbjct: 221 RVLDVFTYTGGFAIHAAIAGAEEV---IAIDKSPRAIETAKENAKLNGVEDRIKFIVGSA 277

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E L      FD+++ +PP
Sbjct: 278 FEEMEKLQKKGEKFDIVILDPP 299


>gi|51591148|emb|CAH22813.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 173 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 229

Query: 160 SVEGLFDVIVSN 171
             E   DV+V+N
Sbjct: 230 PAELSADVVVAN 241


>gi|325956086|ref|YP_004286696.1| methyltransferase small [Lactobacillus acidophilus 30SC]
 gi|325332651|gb|ADZ06559.1| Methyltransferase small [Lactobacillus acidophilus 30SC]
          Length = 206

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P      VD++ + L +A+ NA  N +S   D   SD ++ 
Sbjct: 67  ILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQ 125

Query: 161 VEG--LFDVIVSNPP 173
           V+    F +I++NPP
Sbjct: 126 VDNDKKFGLILTNPP 140


>gi|308190009|ref|YP_003922940.1| site-specific DNA-methyltransferase (adenine-specific) [Mycoplasma
           fermentans JER]
 gi|307624751|gb|ADN69056.1| site-specific DNA-methyltransferase (adenine-specific) [Mycoplasma
           fermentans JER]
          Length = 540

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 22/144 (15%)

Query: 52  HRILGWRDFYNVRLTLSS--------DTFEPRPETELLVDSALA-FSLPRIE-KRDVVRI 101
           H I  + D Y   +T+ +        + F P+  +ELL    L  FS  + E K++V  +
Sbjct: 188 HNIDAFGDAYEYLMTMYAANAGKSGGEFFTPQEVSELLASLTLVDFSSDKREMKKEVDSV 247

Query: 102 LDLGTGTGAVCLALLK---ESPFFKGV-GVDISCKALEIAKSNAVTNGVS------ERFD 151
            D   G+G++ L   K   +    KG  G +I+     +A+ N   +G++      +  D
Sbjct: 248 YDPACGSGSLLLKFAKILGKDKVTKGFFGQEINLTTYNLARINMFLHGINFADFSIKHGD 307

Query: 152 TL-QSDWFSSVEGLFDVIVSNPPY 174
           TL    +F +V+  F+ IVSNPPY
Sbjct: 308 TLNHPQYFENVKN-FEAIVSNPPY 330


>gi|284006323|emb|CBA71558.1| 16S RNA methyltransferase C [Arsenophonus nasoniae]
          Length = 338

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+ +G G +   + K++P  K    D    A+  +      NG++     L SD +S
Sbjct: 199 KLLDMASGCGVLSTVIGKKNPNIKLTLCDTHAAAIRSSIETLKINGLTGHI--LPSDIYS 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++E  +D I+ NPP+ + +  D    E 
Sbjct: 257 TIEDSYDWIICNPPFHDGLKTDYTAAET 284


>gi|268317875|ref|YP_003291594.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252]
 gi|262335409|gb|ACY49206.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252]
          Length = 285

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD GTGTG + +A LK       +  DI   A E A+ N   NGV++R +  Q    
Sbjct: 149 ARVLDAGTGTGILTIAALKLG-AGSAIAFDIDPWAAENAQENFARNGVADRVEFRQGSIE 207

Query: 159 SSVEGLFDVIVSN 171
              E  FD+I++N
Sbjct: 208 VVPERDFDLILAN 220


>gi|193214995|ref|YP_001996194.1| Mg-protoporphyrin IX methyl transferase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088472|gb|ACF13747.1| magnesium protoporphyrin O-methyltransferase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 233

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 11/116 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G ++  ++R T+     +   + E  +   ++ +LP+        ILD G GTG   +
Sbjct: 30  IYGQKEVSSIRKTVRDGHAQMMAQAESWL---MSHNLPK-----GATILDAGCGTGLFSI 81

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+ K    F    +DI+ + +E AK +A   GV++R +    D   S+ G FD +V
Sbjct: 82  AIAKRG--FNVTAIDIAAQMVEQAKVDAKREGVADRINFNVGD-LESISGSFDAVV 134


>gi|157690889|ref|YP_001485351.1| 16S rRNA methyltransferase [Bacillus pumilus SAFR-032]
 gi|157679647|gb|ABV60791.1| possible 16S rRNA methyltransferase [Bacillus pumilus SAFR-032]
          Length = 201

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L+L  E        +D++ +A+E++K NA  N + +     QSD FS+
Sbjct: 62  VLDVGCGYGPIGLSLANEMTSRTIHMIDVNERAVELSKENAKHNRI-DNVRIYQSDLFSN 120

Query: 161 VE--GLFDVIVSNPP 173
           V     F  I++NPP
Sbjct: 121 VHSSAAFASILTNPP 135


>gi|145634581|ref|ZP_01790290.1| phosphatidylserine synthase [Haemophilus influenzae PittAA]
 gi|148825297|ref|YP_001290050.1| phosphatidylserine synthase [Haemophilus influenzae PittEE]
 gi|229844417|ref|ZP_04464557.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1]
 gi|262828354|sp|A5UA66|TRMN6_HAEIE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|145268126|gb|EDK08121.1| phosphatidylserine synthase [Haemophilus influenzae PittAA]
 gi|148715457|gb|ABQ97667.1| phosphatidylserine synthase [Haemophilus influenzae PittEE]
 gi|229812666|gb|EEP48355.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1]
          Length = 232

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A + A+ N   +    R   +Q+D   
Sbjct: 39  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLIQTDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  +    FD+IV+NPPY E  I 
Sbjct: 99  FLQTTAQTFDLIVANPPYFEQGIA 122


>gi|23097566|ref|NP_691032.1| hypothetical protein OB0111 [Oceanobacillus iheyensis HTE831]
 gi|22775789|dbj|BAC12067.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 204

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 5/76 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFS 159
           ILD+G G G + L+L  E        VDI+ +A+E+AK NA  N ++    T+Q SD +S
Sbjct: 65  ILDVGCGYGPIGLSLAAEFEDRAVSMVDINDRAVELAKRNASVNNITNV--TIQTSDIYS 122

Query: 160 SV-EGL-FDVIVSNPP 173
           ++ E L F  +V+NPP
Sbjct: 123 AIGETLRFAAVVTNPP 138


>gi|325103137|ref|YP_004272791.1| methyltransferase small [Pedobacter saltans DSM 12145]
 gi|324971985|gb|ADY50969.1| methyltransferase small [Pedobacter saltans DSM 12145]
          Length = 237

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I D+GTGTG + L L + +   K   +DI  +A++ A  N   +    R       +  
Sbjct: 38  HICDIGTGTGVIALMLAQRNKNAKIDALDIDYRAVDTATKNFENSLFHARLKCYHHSFVE 97

Query: 160 SVE----GLFDVIVSNPPY 174
             E      +DVIVSNPP+
Sbjct: 98  FFEMNPLKKYDVIVSNPPF 116


>gi|304405871|ref|ZP_07387529.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
 gi|304345114|gb|EFM10950.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
          Length = 277

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++DL TG G + L LL         GV+I  +  ++AK +   N + E+   ++ D  +
Sbjct: 66  KVIDLCTGNGVIPL-LLSTRTRAAIDGVEIQPRLADMAKRSVTLNNLDEQIQIIEGDLRT 124

Query: 160 ----SVEGLFDVIVSNPPYIESVIVD 181
               + +G++D +  NPPY+++   D
Sbjct: 125 FPRTAGQGIYDAVTVNPPYMQTQTGD 150


>gi|126465775|ref|YP_001040884.1| RNA methylase [Staphylothermus marinus F1]
 gi|126014598|gb|ABN69976.1| putative RNA methylase [Staphylothermus marinus F1]
          Length = 160

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DLG G G + +  +KE    K VG+D   + +  A+ NA  NGVS R   +  D+F+
Sbjct: 30  VYDLGCGDGRILIVAVKEFNVKKAVGIDKDPERIREARKNAEKNGVSNRIVLINDDFFN 88


>gi|319442700|ref|ZP_07991856.1| cyclopropane-fatty-acyl-phospholipid synthase [Corynebacterium
           variabile DSM 44702]
          Length = 399

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           F +  L+ SS  F+  PE +L    D+ +  +L R    +  R+L++GTG G + L   +
Sbjct: 144 FLDEGLSYSSAFFDKHPEYDLATAQDAKVERALDRAGVGEGSRVLEIGTGWGELSLHAAR 203

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                +   V +S +  ++A+    + G+++R D    D +    G +D IVS    IE 
Sbjct: 204 RGA--QVTSVTLSTEQADLARERIASEGLADRVDVQLCD-YREATGTYDAIVS----IE- 255

Query: 178 VIVDCLGLEVRD 189
            +++ +G E  D
Sbjct: 256 -MIEAVGAEYWD 266


>gi|260582312|ref|ZP_05850105.1| O-methyltransferase [Haemophilus influenzae NT127]
 gi|260094680|gb|EEW78575.1| O-methyltransferase [Haemophilus influenzae NT127]
          Length = 240

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G+GTG + L L + +     +  V++   A++ A+ N   +    R   +Q+D   
Sbjct: 47  ILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRIQLIQTDIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  +    FD+IV+NPPY E  I 
Sbjct: 107 FLQTTAQTFDLIVANPPYFEQGIA 130


>gi|239825684|ref|YP_002948308.1| methyltransferase small [Geobacillus sp. WCH70]
 gi|239805977|gb|ACS23042.1| methyltransferase small [Geobacillus sp. WCH70]
          Length = 200

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T LL+++   F  P+++       LD+G G G + L++ K  P      +DI+ +ALE+A
Sbjct: 46  TRLLIET---FEEPKVDGD----FLDVGCGYGPIGLSIAKAFPNRHVDMIDINKRALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             N   N ++      +SD F+ V +  F  I++NPP
Sbjct: 99  NENKHANHITNA-SIYESDLFAQVGDKKFAAILTNPP 134


>gi|317494237|ref|ZP_07952653.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316918010|gb|EFV39353.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 293

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSN 171
            +    DV+V+N
Sbjct: 221 DLSA--DVVVAN 230


>gi|91228318|ref|ZP_01262247.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           12G01]
 gi|91188134|gb|EAS74437.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           12G01]
          Length = 341

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  +    +LD G G G +   + K +P       DI+  A+  +++    NG+S 
Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD +S  E  +  IVSNPP+
Sbjct: 252 R--VFASDIYSDTEKDYRFIVSNPPF 275


>gi|77918145|ref|YP_355960.1| putative methylase [Pelobacter carbinolicus DSM 2380]
 gi|77544228|gb|ABA87790.1| putative methylase [Pelobacter carbinolicus DSM 2380]
          Length = 269

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 25/47 (53%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           I K++   ILDLG G G     L K SPF     VD S + L +AK+
Sbjct: 53  ISKKNAASILDLGCGDGLFIYELAKASPFLNATLVDASSEMLSVAKA 99


>gi|297543642|ref|YP_003675944.1| methyltransferase small [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841417|gb|ADH59933.1| methyltransferase small [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 248

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG GTG + + +  ++      GV+I     ++A  + V N + +R   +Q D   
Sbjct: 45  KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSVVINNMEKRIKIIQGDVRG 104

Query: 160 SVEGL----FDVIVSNPPYI 175
             + L    FD++ SNPPY+
Sbjct: 105 IEKTLGYEKFDIVTSNPPYM 124


>gi|241760554|ref|ZP_04758647.1| putative methyltransferase [Neisseria flavescens SK114]
 gi|241319058|gb|EER55560.1| putative methyltransferase [Neisseria flavescens SK114]
          Length = 371

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++    D+GTG+G +  A+L +      +  D + KA+  A +N    G+++  +    D
Sbjct: 192 NIQTAFDIGTGSGVIA-AILTKRGIPNIIATDTNPKAIACATANLKRLGLNKAVNIQSID 250

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   +   D+IV NPP++ +       +E   +DP  ++              +GV +H
Sbjct: 251 LFP--KSCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVRKH 297

Query: 217 LNKDG 221
           LN +G
Sbjct: 298 LNPNG 302


>gi|169629596|ref|YP_001703245.1| putative methyltransferase [Mycobacterium abscessus ATCC 19977]
 gi|169241563|emb|CAM62591.1| Putative methyltransferase [Mycobacterium abscessus]
          Length = 201

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+ DL TG+G + LA  KE        +D+   A+E A+SNA    V      LQ DW 
Sbjct: 10  LRVADLCTGSGYLALAAAKEG-AAAVTALDMCPLAVECAQSNA--QRVGADITALQGDWL 66

Query: 159 SSVE-GLFDVIVSNPPYIES 177
            + E G FD++++NPPY+  
Sbjct: 67  RAKEFGPFDLVLANPPYVPG 86


>gi|223982606|ref|ZP_03632841.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM
           12042]
 gi|223965443|gb|EEF69720.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM
           12042]
          Length = 203

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDLG G G + + + K  P  + + VD++ +A+E+A  NA  N V        SD F +
Sbjct: 66  ILDLGCGYGVIGVTVKKMFPDAEMLMVDVNPRAVELAVLNAQKNSVEAEVRV--SDIFGN 123

Query: 161 VEGLFDVIVSNPP 173
           V      I++NPP
Sbjct: 124 VTETLSDILTNPP 136


>gi|300173281|ref|YP_003772447.1| type I restriction-modification system subunit M [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887660|emb|CBL91628.1| type I restriction-modification system, M subunit [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 531

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L + +     K +   G +++     +A+ N + +GV  ER
Sbjct: 213 EDRTPFHIYDPTMGSGSLMLNIRRYLSNPKQIHYHGQELNTTTYNLARMNLILHGVDQER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL SDW +     FD +V NPPY
Sbjct: 273 MNLNNGDTLDSDWPTEEPYQFDAVVMNPPY 302


>gi|293192305|ref|ZP_06609416.1| putative methyltransferase small domain protein [Actinomyces
           odontolyticus F0309]
 gi|292820220|gb|EFF79214.1| putative methyltransferase small domain protein [Actinomyces
           odontolyticus F0309]
          Length = 204

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
           LDLG G G +   +  ESP      VD++ +A+++ + NA +NG    R    +    SS
Sbjct: 64  LDLGCGWGPIATIMSLESPNADVWAVDVNSRAVDLTQRNAQSNGAKGVRALKAEEALTSS 123

Query: 161 VEG--LFDVIVSNPP 173
            E    FDVI SNPP
Sbjct: 124 QESDTRFDVIWSNPP 138


>gi|296127034|ref|YP_003634286.1| methyltransferase small [Brachyspira murdochii DSM 12563]
 gi|296018850|gb|ADG72087.1| methyltransferase small [Brachyspira murdochii DSM 12563]
          Length = 199

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G V +   K     K V  DI   A+  +K NA+ NG+ +    ++SD   
Sbjct: 43  RVLDLGCGYGIVGILAAKIIGEDKVVMCDIDDNAVNTSKENALLNGL-KNISIIKSDGLK 101

Query: 160 SVEGL-FDVIVSNPPY 174
           ++    F +I+SNPPY
Sbjct: 102 NINYKDFSLILSNPPY 117


>gi|294631977|ref|ZP_06710537.1| methyltransferase type 12 [Streptomyces sp. e14]
 gi|292835310|gb|EFF93659.1| methyltransferase type 12 [Streptomyces sp. e14]
          Length = 516

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 32/50 (64%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +   LLK++ + + VGVD+S +AL IA      + +SER
Sbjct: 301 RVLDLGCGEGQLVQTLLKDARYTEIVGVDVSVRALTIAGRRLKLDRMSER 350


>gi|225571896|ref|ZP_03780766.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM
           15053]
 gi|225159449|gb|EEG72068.1| hypothetical protein CLOHYLEM_07870 [Clostridium hylemonae DSM
           15053]
          Length = 118

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157
           ++ILDLGTG+G +   + K+ P    +G+DI  KALE+ +  A    V    F T     
Sbjct: 47  MKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRFKANEENVQNISFITYDGVN 106

Query: 158 FSSVEGLFDVIV 169
           F   +  FD+++
Sbjct: 107 FPFADNEFDMVI 118


>gi|242279348|ref|YP_002991477.1| methyltransferase type 12 [Desulfovibrio salexigens DSM 2638]
 gi|242122242|gb|ACS79938.1| Methyltransferase type 12 [Desulfovibrio salexigens DSM 2638]
          Length = 345

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           ++L  SLP  E  ++ R+LDLG G G +C+ ++   P  +G   D+    +E+A+     
Sbjct: 163 ASLISSLP--EYSNIQRMLDLGCGPGIMCMEVVSNHPTMEGFLCDMP-PLIEVAQDEIAA 219

Query: 144 NGVSERFDTLQSDW 157
            G+  R  T+  D+
Sbjct: 220 AGLESRIHTIAGDY 233


>gi|119468454|ref|ZP_01611545.1| Putative ribosomal RNA small subunit methyltransferase D
           [Alteromonadales bacterium TW-7]
 gi|119447962|gb|EAW29227.1| Putative ribosomal RNA small subunit methyltransferase D
           [Alteromonadales bacterium TW-7]
          Length = 380

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP+  K    +I+DLG G G V +  L   P      VD S  A+E A+ N V   ++ER
Sbjct: 225 LPQTPK--AKKIIDLGCGNGVVGVMTLARCPKASVTFVDESYMAVESARLN-VEQNMAER 281

Query: 150 FDT---LQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           FD    +++D  +  E    D+++ NPP+ ++  V
Sbjct: 282 FDDCEFIENDCLTGFEKNSVDMVLCNPPFHQAQAV 316


>gi|52078600|ref|YP_077391.1| hypothetical protein BL02799 [Bacillus licheniformis ATCC 14580]
 gi|52783962|ref|YP_089791.1| YbxB [Bacillus licheniformis ATCC 14580]
 gi|52001811|gb|AAU21753.1| hypothetical protein with SAM binding motif [Bacillus licheniformis
           ATCC 14580]
 gi|52346464|gb|AAU39098.1| YbxB [Bacillus licheniformis ATCC 14580]
          Length = 201

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G + L+L  +        +D++ +A+E++K NA+ N + +     QSD F++V
Sbjct: 63  LDVGCGYGPIGLSLAADFEDRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANV 121

Query: 162 EGL--FDVIVSNPP 173
           E    F  I++NPP
Sbjct: 122 EPAKKFASIITNPP 135


>gi|332088087|gb|EGI93212.1| methyltransferase small domain protein [Shigella boydii 5216-82]
          Length = 245

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132


>gi|154509065|ref|ZP_02044707.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798699|gb|EDN81119.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
           17982]
          Length = 204

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSS 160
           LDLG G G +   +  ESP      VD++ +A+++ + NA +NG    R    +    SS
Sbjct: 64  LDLGCGWGPIATIMSLESPNADVWAVDVNSRAVDLTQRNAQSNGAKGVRALKAEEALTSS 123

Query: 161 VEG--LFDVIVSNPP 173
            E    FDVI SNPP
Sbjct: 124 QESDTRFDVIWSNPP 138


>gi|323136701|ref|ZP_08071782.1| methyltransferase small [Methylocystis sp. ATCC 49242]
 gi|322398018|gb|EFY00539.1| methyltransferase small [Methylocystis sp. ATCC 49242]
          Length = 245

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G GAV L     +P      V+I   A  +A+ N   NG+++R    ++D  + 
Sbjct: 43  ILDVGAGAGAVGLMAAVRAPGAAIGLVEIDPGAAALARENVAANGLADRVSVFEADVTAP 102

Query: 161 ----VEGLFD----VIVSNPPYIE 176
                 GL D    ++++NPP+ E
Sbjct: 103 GARRAAGLSDEKAALVLTNPPFYE 126


>gi|291565649|dbj|BAI87921.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 415

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +  ++  +RILD G GTG+    L++ +P  + +G+D+S  A+  A+     
Sbjct: 47  AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 106

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +G+S R      F  +       +EG FD+I
Sbjct: 107 SGISTRGTPEPQFKQMSLYDVGQLEGEFDLI 137


>gi|27363996|ref|NP_759524.1| putative O-methyltransferase [Vibrio vulnificus CMCP6]
 gi|81844774|sp|Q8DEQ3|TRMN6_VIBVU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|27360113|gb|AAO09051.1| Predicted O-methyltransferase [Vibrio vulnificus CMCP6]
          Length = 239

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+GTGTG + L   +         VDI   A+E A+ N   +    R      D    
Sbjct: 46  LLDIGTGTGLLSLMCAQRYVHLSITAVDIDAHAMEAAQENFSHSPWHSRLQLQHGDVLKL 105

Query: 160 SVEGLFDVIVSNPPYIES 177
           +    FD I+ NPPY  S
Sbjct: 106 NFTHRFDGIICNPPYFNS 123


>gi|300818852|ref|ZP_07099058.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|300528637|gb|EFK49699.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|324119690|gb|EGC13571.1| methyltransferase small domain-containing protein [Escherichia coli
           E1167]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|315301184|ref|ZP_07872448.1| methyltransferase [Listeria ivanovii FSL F6-596]
 gi|313630454|gb|EFR98323.1| methyltransferase [Listeria ivanovii FSL F6-596]
          Length = 201

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + K     +   VD++ +ALE+AK NA  N  +       S + +
Sbjct: 62  KILDVGCGYGPMGLTIAKAFADSQMEMVDVNLRALELAKENAEINKTTNTHIYESSVYNN 121

Query: 160 SVEGLFDVIVSNPP 173
                +  I+SNPP
Sbjct: 122 VTANDYQAIISNPP 135


>gi|256019001|ref|ZP_05432866.1| putative methyltransferase small domain [Shigella sp. D9]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|220932865|ref|YP_002509773.1| methyltransferase small [Halothermothrix orenii H 168]
 gi|219994175|gb|ACL70778.1| methyltransferase small [Halothermothrix orenii H 168]
          Length = 246

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 56/98 (57%), Gaps = 8/98 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L  +  ++  +D   ++DLG+G+G + L L  +    + +G++I  + ++++K +A 
Sbjct: 26  DSVLLANFVKV--KDGESVVDLGSGSGVIPLLLAFKQKPGRVIGLEILPELVQLSKKSAR 83

Query: 143 TNGVSERFDTLQSDW-----FSSVEGLFDVIVSNPPYI 175
            NG+ E  + ++ D      +  +E + D++V NPPY+
Sbjct: 84  MNGLEEIIEFIEGDIKEIDDYIELESV-DLVVCNPPYM 120


>gi|322387142|ref|ZP_08060752.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC
           700779]
 gi|321141671|gb|EFX37166.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC
           700779]
          Length = 192

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 28/191 (14%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKAL 134
           P+ + L D   A    ++ +     ILD G GTG + L L K+S   K V  VDI+ K L
Sbjct: 15  PKNQFLADLVNAEIKQQVSELSTKSILDFGGGTGLIALPLAKQS---KSVTLVDIAEKML 71

Query: 135 EIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIV-----SNPPYIESVIVDCLGLEVR 188
           E A+   V N   E    +Q D     +E  FD+I+      + P+ +S      GL + 
Sbjct: 72  EQARIK-VENQKLENLHLIQQDLVLKPLEQTFDLIIVSRVLHHMPHFDS------GLAM- 123

Query: 189 DFDPRISLDGGI--------DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            F   ++L G +        DG +H   I++ +   L   G   ++       D + + +
Sbjct: 124 -FKEHLTLGGQLFIADYTVPDGENHGFIISE-LEETLKNHGFSDIQTQILYSSDTLFLDK 181

Query: 241 SRKLFLVNAFK 251
             +LFL +A +
Sbjct: 182 PSQLFLTSAIR 192


>gi|191166840|ref|ZP_03028665.1| methyltransferase family protein [Escherichia coli B7A]
 gi|193061934|ref|ZP_03043030.1| methyltransferase family protein [Escherichia coli E22]
 gi|193067296|ref|ZP_03048264.1| methyltransferase family protein [Escherichia coli E110019]
 gi|194427684|ref|ZP_03060231.1| methyltransferase family protein [Escherichia coli B171]
 gi|209920555|ref|YP_002294639.1| hypothetical protein ECSE_3364 [Escherichia coli SE11]
 gi|218555652|ref|YP_002388565.1| putative methyltransferase small domain [Escherichia coli IAI1]
 gi|218696788|ref|YP_002404455.1| putative methyltransferase small domain [Escherichia coli 55989]
 gi|260845896|ref|YP_003223674.1| putative methyltransferase small domain [Escherichia coli O103:H2
           str. 12009]
 gi|300821681|ref|ZP_07101827.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300905770|ref|ZP_07123504.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301301870|ref|ZP_07208004.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|307310293|ref|ZP_07589941.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|309793651|ref|ZP_07688077.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|312972651|ref|ZP_07786824.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1827-70]
 gi|331669892|ref|ZP_08370737.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA271]
 gi|331679159|ref|ZP_08379831.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H591]
 gi|190903082|gb|EDV62806.1| methyltransferase family protein [Escherichia coli B7A]
 gi|192932154|gb|EDV84752.1| methyltransferase family protein [Escherichia coli E22]
 gi|192959253|gb|EDV89688.1| methyltransferase family protein [Escherichia coli E110019]
 gi|194414192|gb|EDX30467.1| methyltransferase family protein [Escherichia coli B171]
 gi|209913814|dbj|BAG78888.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218353520|emb|CAU99651.1| putative methyltransferase small domain [Escherichia coli 55989]
 gi|218362420|emb|CAR00044.1| putative methyltransferase small domain [Escherichia coli IAI1]
 gi|257761043|dbj|BAI32540.1| predicted methyltransferase small domain [Escherichia coli O103:H2
           str. 12009]
 gi|300402369|gb|EFJ85907.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300525819|gb|EFK46888.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300842851|gb|EFK70611.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|306909188|gb|EFN39683.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|308122608|gb|EFO59870.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|310332593|gb|EFP99806.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1827-70]
 gi|315062390|gb|ADT76717.1| predicted methyltransferase small domain [Escherichia coli W]
 gi|315257000|gb|EFU36968.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
 gi|320201994|gb|EFW76569.1| putative enzyme [Escherichia coli EC4100B]
 gi|323163134|gb|EFZ48967.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           E128010]
 gi|323183033|gb|EFZ68431.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1357]
 gi|323377022|gb|ADX49290.1| methyltransferase small [Escherichia coli KO11]
 gi|323941819|gb|EGB37998.1| methyltransferase small domain-containing protein [Escherichia coli
           E482]
 gi|323946847|gb|EGB42865.1| methyltransferase small domain-containing protein [Escherichia coli
           H120]
 gi|324018195|gb|EGB87414.1| methyltransferase small domain protein [Escherichia coli MS 117-3]
 gi|331062805|gb|EGI34719.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA271]
 gi|331073224|gb|EGI44547.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H591]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|157162560|ref|YP_001459878.1| methyltransferase family protein [Escherichia coli HS]
 gi|229470494|sp|A8A4P1|RLMG_ECOHS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157068240|gb|ABV07495.1| methyltransferase family protein [Escherichia coli HS]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|330833924|ref|YP_004408652.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
 gi|329566063|gb|AEB94168.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
          Length = 186

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG G G + + L  ++P  +   +D +  A++ +K N     + ER   L+SD  S+
Sbjct: 50  VVDLGCGYGPIGIYLALQNPSLRVYMLDANPLAVKASKENVERYKLKERVTVLRSDVLSA 109

Query: 161 VEGLFDVIVSNPPYIESV-IVDCLGLEVRD 189
           ++     I SNPP  + V I++ L +E  +
Sbjct: 110 LDVKASAIFSNPPLSKGVEILEKLAVEASE 139


>gi|253583475|ref|ZP_04860673.1| methyltransferase [Fusobacterium varium ATCC 27725]
 gi|251834047|gb|EES62610.1| methyltransferase [Fusobacterium varium ATCC 27725]
          Length = 393

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 27/124 (21%)

Query: 76  PETELLVDSALAFSLPRIE---------KRDV-----------VRILDLGTGTGAVCLAL 115
           PE  ++ D+ L +S+  IE         +RD             + LD+ + +G   +A 
Sbjct: 175 PERVIMEDNGLKYSIDIIEGQKTGFFLDQRDSRKFIRKYLTKDTKFLDVFSSSGGFSMAA 234

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           LKE+   K   +D    ALE+ + N + NG    F T++ D F  ++ L      FDVI 
Sbjct: 235 LKENCK-KVTAIDKEPHALELCRENYILNGFDGDFVTMEGDAFLLLKTLVGRNEKFDVIT 293

Query: 170 SNPP 173
            +PP
Sbjct: 294 LDPP 297


>gi|162451006|ref|YP_001613373.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sorangium cellulosum 'So ce 56']
 gi|161161588|emb|CAN92893.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sorangium cellulosum 'So ce 56']
          Length = 499

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 45/173 (26%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW------ 57
           LR S +  CR+  L +H  ++ P  VLDD++ +++ +A V +L    + +  GW      
Sbjct: 164 LRVSLARTCRLRELLAHLYVLVP--VLDDKKHYYVGDAEVENL----LAKGKGWLSEHPE 217

Query: 58  ------------RDFYNVRLT--LSSDTFEP------------RPETELLVDSA----LA 87
                       R  +   L   ++ D   P            R E  + +D A    + 
Sbjct: 218 REAIALRYLKHSRPLFRAALARLVADDEASPEEAEDEKAAPEDRGEARMSLDEARREAVV 277

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
            +L R E R V   LDLG G G +   L+ E  F +  G D+S ++LEIA++ 
Sbjct: 278 AALRRAEARSV---LDLGCGEGKLLKRLVDERVFERVAGADVSVRSLEIARNR 327


>gi|87307197|ref|ZP_01089342.1| hypothetical protein DSM3645_16780 [Blastopirellula marina DSM
           3645]
 gi|87289937|gb|EAQ81826.1| hypothetical protein DSM3645_16780 [Blastopirellula marina DSM
           3645]
          Length = 335

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 17/104 (16%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL------------DLGTGTGAVCLALLK 117
           D     PE+  + D+A+      I  R+   IL            D+G G G+  +ALL 
Sbjct: 133 DYLSQHPESAAIFDAAMT----SIHGRETAAILEAYDFSQFGLIADVGGGNGSKLIALLT 188

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           + P  +G+ VD+    +E A  N V  GV+ER   +  D+F  V
Sbjct: 189 KHPQVRGMLVDLP-HVVERAAPNFVAAGVNERMTLIGGDFFVEV 231


>gi|320182100|gb|EFW57004.1| putative methyltransferase [Shigella boydii ATCC 9905]
          Length = 245

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132


>gi|293449421|ref|ZP_06663842.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B088]
 gi|291322511|gb|EFE61940.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B088]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|116492640|ref|YP_804375.1| O-methyltransferase [Pediococcus pentosaceus ATCC 25745]
 gi|116102790|gb|ABJ67933.1| Predicted O-methyltransferase [Pediococcus pentosaceus ATCC 25745]
          Length = 251

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K    +I+DL +G GAV L L K++     + V+I  +  E+A  + 
Sbjct: 32  LDAVLLANFAEVKKASKTKIVDLCSGNGAVGLFLSKKTAGHVTM-VEIQSRLAEMAMRSI 90

Query: 142 VTNGVSERFDTLQ---SDWFSSVEG-LFDVIVSNPPYIE 176
             N +++R+D       D  + +     D IV NPPY E
Sbjct: 91  QLNDLTDRYDVYNMPLKDALTKINADSIDNIVCNPPYFE 129


>gi|113475847|ref|YP_721908.1| type 12 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110166895|gb|ABG51435.1| Methyltransferase type 12 [Trichodesmium erythraeum IMS101]
          Length = 403

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A +F   +  K+  +RILD G GTG+    L+  +P    VG+D+S  AL +AK     +
Sbjct: 42  AYSFCTGQKPKKQDIRILDAGCGTGSSTDYLVHLNPQASVVGIDLSSGALRVAKERCSRS 101

Query: 145 GVS 147
           G S
Sbjct: 102 GAS 104


>gi|291435449|ref|ZP_06574839.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
 gi|291338344|gb|EFE65300.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
          Length = 228

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELL  +     +P         +LD+GTG  +  LAL       +   VD+S 
Sbjct: 21  YAPQEDTELLAGALSDEPVP-----PGADVLDMGTG--SGALALEAARRGTRVTAVDVSW 73

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +A+   + NA+  GV  R    + + F  V G  FD+I++NPPY+ +
Sbjct: 74  RAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPA 118


>gi|213053185|ref|ZP_03346063.1| hypothetical protein Salmoneentericaenterica_09800 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|168243053|ref|ZP_02667985.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194450232|ref|YP_002047257.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|200387845|ref|ZP_03214457.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|229564344|sp|B4TIU8|RLMG_SALHS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|194408536|gb|ACF68755.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|199604943|gb|EDZ03488.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205337838|gb|EDZ24602.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|161760558|ref|YP_072057.2| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186897061|ref|YP_001874173.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|60390350|sp|Q665E3|PRMA_YERPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710128|sp|B2K467|PRMA_YERPB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|186700087|gb|ACC90716.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
          Length = 293

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 LIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD--Q 218

Query: 160 SVEGLFDVIVSN 171
             E   DV+V+N
Sbjct: 219 PAELSADVVVAN 230


>gi|269125964|ref|YP_003299334.1| type 12 methyltransferase [Thermomonospora curvata DSM 43183]
 gi|268310922|gb|ACY97296.1| Methyltransferase type 12 [Thermomonospora curvata DSM 43183]
          Length = 474

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 73  EPR-PETELLVDSALAFSLPRIEKR-----------DVVRILDLGTGTGAVCLALLKESP 120
           EP+ P      D  L  + P  E+R           D  R++DLG G G +   LL +  
Sbjct: 260 EPQAPPAACEEDGGLPAAAPLAEQRIRAVLQVLRDHDAPRVIDLGCGAGRLLTRLLADPF 319

Query: 121 FFKGVGVDISCKALEIAKSNA--VTNGVSERFDTLQS 155
           F +  GVD+S +AL +A+ NA     G   R++  Q 
Sbjct: 320 FTRVTGVDVSHRALAMARRNAERAAVGRERRWEVFQG 356


>gi|145300504|ref|YP_001143345.1| O-methyltransferase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|262827853|sp|A4SRS5|TRMN6_AERS4 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|142853276|gb|ABO91597.1| predicted O-methyltransferase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 236

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSER 149
           P  E R   R+LD+GTG+G V L L + S     +  VD+   A   A+ N   +    R
Sbjct: 35  PVAETR---RVLDIGTGSGLVALMLAQRSRSDCIIDAVDLDMNAATQARENVAASPWETR 91

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            + ++          +D+IVSNPPY
Sbjct: 92  INIMEGAIQDYQATPYDLIVSNPPY 116


>gi|257126532|ref|YP_003164646.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
 gi|257050471|gb|ACV39655.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
          Length = 242

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L     +I  R   +ILD+GTG G + L L + S   +  G+++     EI   N 
Sbjct: 28  LDSVLLADFVKI-NRKTKKILDIGTGCGIIALLLAQRSK-AQITGIELQETMAEITIRNI 85

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPYIE 176
             N    +   +  D       F+  E  FD IV+NPPY E
Sbjct: 86  NGNKFENQVKIINEDIKNYKNIFNRDE--FDTIVTNPPYFE 124


>gi|198244714|ref|YP_002217201.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207858477|ref|YP_002245128.1| hypothetical protein SEN3062 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|229564341|sp|B5FHV5|RLMG_SALDC RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564342|sp|B5QZ55|RLMG_SALEP RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|197939230|gb|ACH76563.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|206710280|emb|CAR34638.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326624977|gb|EGE31322.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|152965470|ref|YP_001361254.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
 gi|151359987|gb|ABS02990.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
          Length = 202

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 82  VDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   A  LP IE  D    +LDLG G G + L+L    P      VD++ +AL++ + N
Sbjct: 43  VDQGTAVLLPLIEDADAAGDVLDLGCGWGPIALSLALRRPRQVVHAVDVNERALDLLRHN 102

Query: 141 AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173
           A   GV+ R    D +  D        F  I SNPP
Sbjct: 103 AARLGVAVRASLPDEVDEDLR------FTEIWSNPP 132


>gi|107026560|ref|YP_624071.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116692250|ref|YP_837783.1| methyltransferase type 11 [Burkholderia cenocepacia HI2424]
 gi|105895934|gb|ABF79098.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116650250|gb|ABK10890.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 99  VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A   GV  RF
Sbjct: 50  TRVLDVGCGTGAVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102


>gi|302871656|ref|YP_003840292.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574515|gb|ADL42306.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 314

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 15/132 (11%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K+    + + VDI   A+++AK NA  NGV    +  +++  
Sbjct: 170 MNVLDVGTGSGILAIAA-KKLLAKRVLAVDIDEVAVKVAKENANLNGV--EIEIKKNNLV 226

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSR 215
             +E  FD++V+N      ++ D + + +  +  R+  D GI    G+   R   + V +
Sbjct: 227 EGIEEKFDIVVAN------IVADII-IRLSTYVNRVLKDSGIFISSGIIENRL--EDVLK 277

Query: 216 HLNKDGLCSVEI 227
              K+GL  VE+
Sbjct: 278 SFAKNGLKVVEV 289


>gi|226327274|ref|ZP_03802792.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198]
 gi|225204492|gb|EEG86846.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198]
          Length = 169

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+  G G +   L K++P  K    D++  A+  + +    N +  R   + S+ +S+
Sbjct: 31  LLDMACGCGVLATVLGKKNPMLKLTLCDVNAAAISSSIATLNVNELEGR--VIASNVYSA 88

Query: 161 VEGLFDVIVSNPPY 174
           VE  +D I+SNPP+
Sbjct: 89  VEETYDWIISNPPF 102


>gi|16761992|ref|NP_457609.1| hypothetical protein STY3400 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143479|ref|NP_806821.1| hypothetical protein t3140 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213022213|ref|ZP_03336660.1| hypothetical protein Salmonelentericaenterica_05882 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|213417454|ref|ZP_03350596.1| hypothetical protein Salmonentericaenterica_05977 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213427205|ref|ZP_03359955.1| hypothetical protein SentesTyphi_17297 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213583083|ref|ZP_03364909.1| hypothetical protein SentesTyph_18488 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213616324|ref|ZP_03372150.1| hypothetical protein SentesTyp_18364 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646099|ref|ZP_03376152.1| hypothetical protein SentesTy_01329 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852651|ref|ZP_03382183.1| hypothetical protein SentesT_07161 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825888|ref|ZP_06545048.1| hypothetical protein Salmonellentericaenterica_10825 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|81853214|sp|Q8Z3L8|RLMG_SALTI RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|25511898|pir||AB0894 conserved hypothetical protein STY3400 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504295|emb|CAD07744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139113|gb|AAO70681.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|315640769|ref|ZP_07895871.1| methyltransferase [Enterococcus italicus DSM 15952]
 gi|315483524|gb|EFU74018.1| methyltransferase [Enterococcus italicus DSM 15952]
          Length = 187

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 7/88 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL +G+G + +  +      K V VD + +A+ I K N       E+F  L+ D  +
Sbjct: 44  KVLDLFSGSGGLAIEAISRG-MDKAVCVDKNYQAISIIKENIQITKEPEKFVVLKMDANA 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVD 181
           +++ L      FD+I+ +PPY +  IVD
Sbjct: 103 ALKKLSGEEMKFDLILFDPPYAKQEIVD 130


>gi|284051486|ref|ZP_06381696.1| hypothetical protein AplaP_08424 [Arthrospira platensis str.
           Paraca]
          Length = 441

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +  ++  +RILD G GTG+    L++ +P  + +G+D+S  A+  A+     
Sbjct: 73  AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 132

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVI 168
           +G+S R      F  +       +EG FD+I
Sbjct: 133 SGISTRGTPEPQFKQMSLYDVGQLEGEFDLI 163


>gi|261248387|emb|CBG26224.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|205354134|ref|YP_002227935.1| hypothetical protein SG3116 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|229564343|sp|B5REH7|RLMG_SALG2 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|205273915|emb|CAR38917.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629254|gb|EGE35597.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|220910420|ref|YP_002485731.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219867031|gb|ACL47370.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 390

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 34/65 (52%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            +A +F   R   +D VRILD G GTG     L   +P  +   +D+S KAL +A++   
Sbjct: 36  QAAYSFCTGRKPAQDKVRILDAGCGTGVGTEYLCHLNPQAQITAIDLSAKALSVAQTRCQ 95

Query: 143 TNGVS 147
            +G +
Sbjct: 96  KSGAT 100


>gi|312138720|ref|YP_004006056.1| methyltransferase [Rhodococcus equi 103S]
 gi|311888059|emb|CBH47371.1| putative methyltransferase [Rhodococcus equi 103S]
          Length = 377

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 14/154 (9%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR+  R+    +DLG GTG + ++L K  P  + +  D S  A+  A + A  NGV+ R
Sbjct: 227 LPRM--REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAAR 284

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGIDGLSHY 206
              ++ D  SS+ E   D+I+ NPP+     V   G   + FD   R+   GG       
Sbjct: 285 VRVIRDDALSSLPESSVDLILCNPPFHVGAAVHT-GSAGKMFDAAGRVLRPGG-----EL 338

Query: 207 RTIAD---GVSRHLNKDGLCSVEIGYNQKVDVVR 237
            T+ +   G  R L +    + E+G N K  V R
Sbjct: 339 WTVYNSHLGYKRALERAVGRTEEVGRNPKFTVTR 372


>gi|255085917|ref|XP_002508925.1| predicted protein [Micromonas sp. RCC299]
 gi|226524203|gb|ACO70183.1| predicted protein [Micromonas sp. RCC299]
          Length = 174

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 9/113 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG---AVCLALLKESPF--FKGVG 126
           +EP  ++ LLVD+ +A    R+        L++G+GTG   A    L+++S    F+   
Sbjct: 2   YEPAEDSFLLVDTLVAEWDARLANDPPRCALEVGSGTGYVIASAAVLMRDSGLDDFRCHA 61

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
            D++  A+   ++ A  +GV +    +Q D    +     G  D+++ NPPY+
Sbjct: 62  TDVNPDAVACTRATADAHGVGDYVTVIQCDLLGPLRERLRGKVDLLLFNPPYV 114


>gi|194471887|ref|ZP_03077871.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458251|gb|EDX47090.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|161616215|ref|YP_001590180.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|229564346|sp|A9N601|RLMG_SALPB RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|161365579|gb|ABX69347.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|149245584|ref|XP_001527269.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449663|gb|EDK43919.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 220

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 101 ILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSD 156
           +L++GTG+G V   +L+   P    +  DI+  A  I   N +    SER    D L+ D
Sbjct: 47  VLEIGTGSGIVTTFMLQHILPQALYLASDINPSAC-ITARNTIRQNCSERANFVDILRMD 105

Query: 157 WFSSVE-GLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             SS+   + DV+V NPPY+  E + +     E  +    ++L GG DG+     + + +
Sbjct: 106 LASSLRTNIVDVLVFNPPYVPAEEMPIPPANNEEGELWLDLALLGGKDGMVTTWKVLNLL 165

Query: 214 SRHLNKDGLCSVEI-GYNQKVDVVRIFESR 242
              L  DG+  +     N+  +V  I  +R
Sbjct: 166 QEILASDGIAYILFCARNRPDEVAEIMRNR 195


>gi|16766519|ref|NP_462134.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56415159|ref|YP_152234.1| hypothetical protein SPA3088 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|167990223|ref|ZP_02571323.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231825|ref|ZP_02656883.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237920|ref|ZP_02662978.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168262775|ref|ZP_02684748.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168463565|ref|ZP_02697482.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819712|ref|ZP_02831712.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194735079|ref|YP_002116177.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197364089|ref|YP_002143726.1| hypothetical protein SSPA2884 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|204928272|ref|ZP_03219472.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|238910022|ref|ZP_04653859.1| hypothetical protein SentesTe_02650 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|81521597|sp|Q8ZLX5|RLMG_SALTY RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|81821326|sp|Q5PC93|RLMG_SALPA RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470396|sp|B5BG31|RLMG_SALPK RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470397|sp|B4TVV4|RLMG_SALSV RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|16421777|gb|AAL22093.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56129416|gb|AAV78922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194710581|gb|ACF89802.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633487|gb|EDX51901.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197095566|emb|CAR61131.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197289090|gb|EDY28459.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204322594|gb|EDZ07791.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205331276|gb|EDZ18040.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333928|gb|EDZ20692.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205343310|gb|EDZ30074.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348321|gb|EDZ34952.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|267995416|gb|ACY90301.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159772|emb|CBW19291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914247|dbj|BAJ38221.1| hypothetical protein STMDT12_C32780 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087674|emb|CBY97438.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321225903|gb|EFX50957.1| 23S rRNA guanine-N-2- -methyltransferase rlmG [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322613623|gb|EFY10564.1| hypothetical protein SEEM315_07845 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621216|gb|EFY18074.1| hypothetical protein SEEM971_20574 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624279|gb|EFY21113.1| hypothetical protein SEEM973_20690 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627983|gb|EFY24772.1| hypothetical protein SEEM974_20600 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633101|gb|EFY29843.1| hypothetical protein SEEM201_11695 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636322|gb|EFY33030.1| hypothetical protein SEEM202_14378 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643497|gb|EFY40059.1| hypothetical protein SEEM954_04760 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647612|gb|EFY44100.1| hypothetical protein SEEM054_00625 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648594|gb|EFY45041.1| hypothetical protein SEEM675_03756 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653646|gb|EFY49972.1| hypothetical protein SEEM965_21401 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657754|gb|EFY54022.1| hypothetical protein SEEM19N_17526 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663855|gb|EFY60054.1| hypothetical protein SEEM801_03816 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669134|gb|EFY65285.1| hypothetical protein SEEM507_10761 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672873|gb|EFY68980.1| hypothetical protein SEEM877_00025 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678137|gb|EFY74200.1| hypothetical protein SEEM867_02792 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681313|gb|EFY77346.1| hypothetical protein SEEM180_21284 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687757|gb|EFY83724.1| hypothetical protein SEEM600_15101 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323131580|gb|ADX19010.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195569|gb|EFZ80746.1| hypothetical protein SEEM581_10365 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199750|gb|EFZ84840.1| hypothetical protein SEEM501_16925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202502|gb|EFZ87542.1| hypothetical protein SEEM460_17515 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208010|gb|EFZ92956.1| hypothetical protein SEEM020_19120 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212438|gb|EFZ97255.1| hypothetical protein SEEM6152_09418 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215080|gb|EFZ99828.1| hypothetical protein SEEM0077_03979 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222810|gb|EGA07175.1| hypothetical protein SEEM0047_10235 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224109|gb|EGA08402.1| hypothetical protein SEEM0055_22230 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230433|gb|EGA14551.1| hypothetical protein SEEM0052_19234 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235215|gb|EGA19301.1| hypothetical protein SEEM3312_06753 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239256|gb|EGA23306.1| hypothetical protein SEEM5258_06640 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244386|gb|EGA28392.1| hypothetical protein SEEM1156_00567 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247003|gb|EGA30969.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323254064|gb|EGA37884.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323256179|gb|EGA39915.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262645|gb|EGA46201.1| hypothetical protein SEEM8284_02766 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267259|gb|EGA50743.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323269339|gb|EGA52794.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|332990085|gb|AEF09068.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|328950160|ref|YP_004367495.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884]
 gi|328450484|gb|AEB11385.1| Methyltransferase type 11 [Marinithermus hydrothermalis DSM 14884]
          Length = 216

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 8/73 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWF 158
           R+LDLGTGTG +    L      +  GVD+S K L+ AK+   T   V   F+ L     
Sbjct: 49  RVLDLGTGTGNLAGRFLDRG--VEVTGVDLSQKMLQRAKAKYPTLETVEGHFEDL----- 101

Query: 159 SSVEGLFDVIVSN 171
           S V GL+D IVS+
Sbjct: 102 SRVRGLYDAIVSS 114


>gi|259487544|tpe|CBF86301.1| TPA: TAM domain methyltransferase, putative (AFU_orthologue;
           AFUA_2G15860) [Aspergillus nidulans FGSC A4]
          Length = 373

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 24/164 (14%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-DFYNV--------R 64
           V   S    + D DSV D    F  T   VR   +E+  R   +R   Y +        R
Sbjct: 55  VLQTSDEDSLYDADSVADSSLSFAST---VRDYYYENGRRYHAYRYGQYPIPNDEEEQDR 111

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++   F+      LL    L +  P  ++    RILD+GTGTGA  L + ++ P  + 
Sbjct: 112 LNITHHLFK------LLTGGDL-YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEI 164

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           +G D+S      +  N          D  +SDW  S +  FD I
Sbjct: 165 IGTDLSPIQPSFSPPNCTFI-----IDDAESDWAFSKDEPFDYI 203


>gi|254818552|ref|ZP_05223553.1| hypothetical protein MintA_01441 [Mycobacterium intracellulare ATCC
           13950]
          Length = 250

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG G    A+   S  +   G+D S  A+E A++NA   GVS  F+   +     
Sbjct: 54  VLDPGTGPG--HHAIYYASKGYSATGIDGSAGAIERARANAEKAGVSVNFEVADATKLDG 111

Query: 161 VEGLFDVIV 169
            +G FD +V
Sbjct: 112 FDGHFDTVV 120


>gi|300709256|ref|XP_002996794.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01]
 gi|239606119|gb|EEQ83123.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01]
          Length = 196

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 16/82 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNA-VTNGVSERFDTLQS 155
           RILDL  GTG +  A+     FF     VGVDI  +A++I K N    N V    D +++
Sbjct: 51  RILDLCCGTGMLSAAV----SFFNPSTIVGVDIDYEAIKIYKENLDHLNNV----DIVKA 102

Query: 156 DWFSSVE---GLFDVIVSNPPY 174
           D F+++E   G FD ++ NPP+
Sbjct: 103 D-FNNLEFRSGFFDTVIMNPPF 123


>gi|229030573|ref|ZP_04186608.1| Methyltransferase type 11 [Bacillus cereus AH1271]
 gi|228730740|gb|EEL81685.1| Methyltransferase type 11 [Bacillus cereus AH1271]
          Length = 261

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +PFFK  V +D++ K LE AK+  ++N
Sbjct: 30  LQYVVQQVESRHNYRLLDIATGGGHVANLL---APFFKEVVALDLTEKMLESAKNFIMSN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|254173067|ref|ZP_04879741.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
 gi|214033223|gb|EEB74051.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
          Length = 418

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+LDL +G G   + L K    F+  G++I+  A+E+A  NA  NGV+ +F   +++
Sbjct: 280 DGERVLDLYSGVGTFGVYLAKRG--FRVEGIEINPFAVEMANRNAKLNGVNAQFRVGRAE 337

Query: 157 WFSSVEGLFDVIVSNPP 173
              +  G +D ++ +PP
Sbjct: 338 --ETPIGDYDTVIVDPP 352


>gi|150399401|ref|YP_001323168.1| hypothetical protein Mevan_0650 [Methanococcus vannielii SB]
 gi|150012104|gb|ABR54556.1| protein of unknown function DUF890 [Methanococcus vannielii SB]
          Length = 268

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           + I   +  + + +    D   P P     ++  L  +   I+K+ +  +L++GTG+G +
Sbjct: 46  YNIAILKGVFGLDMDFHEDALIPTP-----INRYLFINEVFIKKQGIKSVLEIGTGSGIL 100

Query: 112 CLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----- 164
            + + K   +F       D   + L+IA  N   N +S   D L S     +EG+     
Sbjct: 101 SIMIAK---YFNSRCTATDTLNEYLDIAMENICKNKLSNEIDLLNSKG-KIIEGIAELTG 156

Query: 165 --FDVIVSNPPY 174
             FD+I+S PPY
Sbjct: 157 KKFDLIISYPPY 168


>gi|241761758|ref|ZP_04759844.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|260752518|ref|YP_003225411.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|241373672|gb|EER63232.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|258551881|gb|ACV74827.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
          Length = 415

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + L  L +    + +GV +S + L+IA+  A   G+ +R      D + 
Sbjct: 178 RILDIGCGWGGMAL-FLGQIADVEVLGVTLSEEQLKIARKRAKEAGLDDRVKFQLID-YR 235

Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182
            V+G FD IVS        PPY ++    C
Sbjct: 236 EVKGRFDRIVSVGMFEHVGPPYYKNFFNHC 265


>gi|88802687|ref|ZP_01118214.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P]
 gi|88781545|gb|EAR12723.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P]
          Length = 242

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
           ILD+G GTG + L L + S       V++   A E +  N   +   +R     + +   
Sbjct: 43  ILDIGAGTGVLSLMLAQRSDAMTIDAVELDENAYEQSVENFENSDWGDRLYCYNASFQEF 102

Query: 158 ---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               S  E  +D+IVSNPP+             +  D   +       +S +  +  GVS
Sbjct: 103 VAEISIEEETYDLIVSNPPFYTDTF--------KTLDEARNKARFTSSMS-FEELLLGVS 153

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           + L++ G  SV I + +K + + +    KLFL
Sbjct: 154 KILSETGCFSVIIPFKEKANFIALAGENKLFL 185


>gi|269140490|ref|YP_003297191.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202]
 gi|267986151|gb|ACY85980.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202]
 gi|304560281|gb|ADM42945.1| Ribosomal protein L11 methyltransferase [Edwardsiella tarda FL6-60]
          Length = 293

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAERNGVSERLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSN 171
            +    DV+V+N
Sbjct: 221 DLSA--DVVVAN 230


>gi|189195984|ref|XP_001934330.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980209|gb|EDU46835.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 438

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 41/185 (22%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106
           + +  +LG   F ++ +        PR +T   V   + L  + P +     +R+LDL T
Sbjct: 74  KPLQYLLGSEYFGDLEIRCKPGVLIPRADTAASVTHLAGLLQNAPNLPPE--LRVLDLCT 131

Query: 107 GTGAVCLALL--------KESPFFKGVGVDISCKALEIA--------------------- 137
           GTG  C+ LL        +     + +G+DIS KA+ +A                     
Sbjct: 132 GTG--CIPLLFKYQLSSARNDISLRLLGIDISPKAIGLAAKNLRRLQKHGQLNTQGNFDF 189

Query: 138 -KSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFD 191
            ++N + N   E+ + + S      ++ +   +D+++SNPPYI  S         VR F+
Sbjct: 190 LRANVMINPFVEQTEGIPSVKAALNYALMPSFWDILISNPPYISPSEFWKTTTRSVRGFE 249

Query: 192 PRISL 196
           P+++L
Sbjct: 250 PKLAL 254


>gi|254248615|ref|ZP_04941935.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
 gi|124875116|gb|EAY65106.1| SAM-dependent methyltransferase [Burkholderia cenocepacia PC184]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 99  VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A   GV  RF
Sbjct: 50  TRVLDVGCGTGAVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102


>gi|309792423|ref|ZP_07686889.1| putative RNA methylase [Oscillochloris trichoides DG6]
 gi|308225533|gb|EFO79295.1| putative RNA methylase [Oscillochloris trichoides DG6]
          Length = 352

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           ++ A+A ++ R+   D   R L++G G+G++ +  L   P  + +G DI   AL  +K+N
Sbjct: 183 LNGAVAHAMARLSLPDPTDRFLNIGCGSGSLLIERLLIGPTRRAIGCDIDPAALRCSKAN 242

Query: 141 AVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPY 174
               G+SER     +D  Q    ++     D IV++ P+
Sbjct: 243 VEAAGLSERCQLELWDACQLPLHNAS---MDAIVADLPF 278


>gi|284036603|ref|YP_003386533.1| RNA methyltransferase, TrmA family [Spirosoma linguale DSM 74]
 gi|283815896|gb|ADB37734.1| RNA methyltransferase, TrmA family [Spirosoma linguale DSM 74]
          Length = 476

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 15/147 (10%)

Query: 40  NAIVRSLKHESIH--RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR- 96
           N I+ + K++S     ++ W     +   + + TF   P++    ++  A++L ++ +  
Sbjct: 265 NYILNTKKNDSYQDQEVVNWAGKPYIEEQMEALTFRIGPKSFYQTNAQQAYNLYKVAREF 324

Query: 97  ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--- 149
                  R+ DL TGTG + L + + +     VGV+    ++  A+ NA  NG++     
Sbjct: 325 AGLTGQERVYDLYTGTGTIALFVARLAKHV--VGVEYVEASVADARVNAQVNGIANTTFV 382

Query: 150 ---FDTLQSDWFSSVEGLFDVIVSNPP 173
                 + +D F +  G  DV++++PP
Sbjct: 383 AGDMKAILTDEFFAEHGRPDVVITDPP 409


>gi|255659182|ref|ZP_05404591.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM
           20544]
 gi|260848633|gb|EEX68640.1| putative SAM-dependent methyltransferase [Mitsuokella multacida DSM
           20544]
          Length = 257

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 4/71 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ILD+GTG G   L L   +P   + +GVD+S K ++ A+ N +  GV  RF  + +    
Sbjct: 69  ILDIGTGAGFFPLLL---APLGHEVIGVDLSEKMVQEARKNCLAAGVPARFRKMDAQALD 125

Query: 160 SVEGLFDVIVS 170
             +  FDVI+S
Sbjct: 126 FADESFDVILS 136


>gi|70733157|ref|YP_262930.1| hypothetical protein PFL_5872 [Pseudomonas fluorescens Pf-5]
 gi|68347456|gb|AAY95062.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 398

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NG +E+   ++ D 
Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGFAEKMTCIEGDV 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDVIV++PP +I+           R  D +       +G   YR + 
Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDLK-------NGEGAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R LNKDG+     CS+ +
Sbjct: 322 EQAMRLLNKDGILVSASCSMHL 343


>gi|67523419|ref|XP_659769.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4]
 gi|40745053|gb|EAA64209.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4]
          Length = 371

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 24/164 (14%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-DFYNV--------R 64
           V   S    + D DSV D    F  T   VR   +E+  R   +R   Y +        R
Sbjct: 53  VLQTSDEDSLYDADSVADSSLSFAST---VRDYYYENGRRYHAYRYGQYPIPNDEEEQDR 109

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++   F+      LL    L +  P  ++    RILD+GTGTGA  L + ++ P  + 
Sbjct: 110 LNITHHLFK------LLTGGDL-YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEI 162

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           +G D+S      +  N          D  +SDW  S +  FD I
Sbjct: 163 IGTDLSPIQPSFSPPNCTFI-----IDDAESDWAFSKDEPFDYI 201


>gi|262037227|ref|ZP_06010710.1| methyltransferase small [Leptotrichia goodfellowii F0264]
 gi|261748747|gb|EEY36103.1| methyltransferase small [Leptotrichia goodfellowii F0264]
          Length = 201

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G V + L    P       D++ +ALE+++ N   + +++ +  ++S  F +
Sbjct: 64  VLDIGCGYGIVSVVLKTFYPLSSVTLSDVNERALELSEENLKNHNIND-YKIVKSFAFDN 122

Query: 161 VEGLFDVIVSNPP 173
           +   +D+I+SNPP
Sbjct: 123 ISDKYDIIMSNPP 135


>gi|17552558|ref|NP_497990.1| hypothetical protein C38D4.9 [Caenorhabditis elegans]
 gi|3874828|emb|CAA86320.1| C. elegans protein C38D4.9, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 214

 Score = 41.2 bits (95), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +             +GVDI  +AL+I   N  T  V +R + LQ+D   
Sbjct: 50  KLIDIGCGCGMLMTTAATMYELETVLGVDIDDEALKICSRNLETAEVQDRCELLQADILD 109

Query: 160 S----VEGLFDVIVSNPPY 174
                  G FDV V NPP+
Sbjct: 110 PESDLPRGTFDVAVINPPF 128


>gi|260771155|ref|ZP_05880082.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972]
 gi|260613752|gb|EEX38944.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972]
          Length = 239

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
            ILD+GTGTG + L   +  P      VDI   A   A  N   +  + R    Q +   
Sbjct: 45  HILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSPWANRIQVAQQNILQ 104

Query: 159 SSVEGLFDVIVSNPPY 174
           + +    D I+ NPPY
Sbjct: 105 TQLNTPVDAIICNPPY 120


>gi|300781027|ref|ZP_07090881.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030]
 gi|300532734|gb|EFK53795.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030]
          Length = 505

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 4/125 (3%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           H I G   F    +  S     P P+  L V +A    L       V  +LDLGTG+G  
Sbjct: 106 HIIAGADRFIFSDMDASVTEHVPGPDHVLGVGAASLSLLSATPLTPVGTVLDLGTGSGVQ 165

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVS 170
            LA    +        D+  +AL++A +      ++   +  +  WF  V G  FD IV+
Sbjct: 166 ALAQAGTAQHV--TATDVHPRALDLAAATMAGADIT-NVELREGPWFDLVAGQRFDRIVA 222

Query: 171 NPPYI 175
           NPP++
Sbjct: 223 NPPFV 227


>gi|251791403|ref|YP_003006124.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591]
 gi|247540024|gb|ACT08645.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591]
          Length = 295

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 17/108 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPN 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLS 204
            +    DV+V+N           L   +R+  P IS+    GG  GLS
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPKTGGHLGLS 256


>gi|187731581|ref|YP_001881356.1| putative methyltransferase [Shigella boydii CDC 3083-94]
 gi|262828745|sp|B2TYI8|TRMN6_SHIB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831193|sp|Q31XR1|TRMN6_SHIBS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|187428573|gb|ACD07847.1| putative methyltransferase [Shigella boydii CDC 3083-94]
 gi|320175855|gb|EFW50936.1| putative methyltransferase [Shigella dysenteriae CDC 74-1112]
 gi|320186376|gb|EFW61110.1| putative methyltransferase [Shigella flexneri CDC 796-83]
          Length = 245

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132


>gi|262163924|ref|ZP_06031663.1| predicted O-methyltransferase [Vibrio mimicus VM223]
 gi|262027452|gb|EEY46118.1| predicted O-methyltransferase [Vibrio mimicus VM223]
          Length = 239

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 14/149 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +     +   +DI   A +  + N+  +  + R   LQ+D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATEKNSENSPWANRIQCLQADVRYW 105

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  F  I+ NPPY  S      G   + F    +   G   L H   I + + + L
Sbjct: 106 HPPQR--FSAIICNPPYFNS------GETAQQFARATARHTG--SLKHQELI-ECLPQLL 154

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             DG+ S  +   +    + + E   L+L
Sbjct: 155 EPDGVASFILPKTEGDQFIALAEQAGLYL 183


>gi|239928351|ref|ZP_04685304.1| hypothetical protein SghaA1_09003 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436678|ref|ZP_06576068.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339573|gb|EFE66529.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 489

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             R+LDLG G G +   LL++  F + VGVD+S +AL IA      + V ER
Sbjct: 301 AARVLDLGCGQGQLVQELLRDPSFTEIVGVDVSMRALTIASRRLRLDRVGER 352


>gi|240144623|ref|ZP_04743224.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82]
 gi|257203339|gb|EEV01624.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82]
 gi|291540315|emb|CBL13426.1| Predicted O-methyltransferase [Roseburia intestinalis XB6B4]
          Length = 246

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LDLGTGTG + + +  ++       ++I  ++ ++A+ +   N + ++ + +  D   
Sbjct: 49  RVLDLGTGTGIIPILMEAKTEAEDFKALEIQEESADMARRSVCYNHLEDKIEIVTGDIKE 108

Query: 158 FSSVEGL--FDVIVSNPPYI 175
            S++ G   FDVI +NPPY+
Sbjct: 109 ASAIFGASSFDVITTNPPYM 128


>gi|197262741|ref|ZP_03162815.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197240996|gb|EDY23616.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|73668549|ref|YP_304564.1| type I restriction-modification system methyltransferase subunit
           [Methanosarcina barkeri str. Fusaro]
 gi|72395711|gb|AAZ69984.1| type I restriction-modification system methyltransferase subunit
           [Methanosarcina barkeri str. Fusaro]
          Length = 680

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 14/116 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE--------SPFF 122
           F PR    L+V+  L+    ++ +  +VR + D   GTG + L + KE        +   
Sbjct: 178 FTPREVIRLMVNLLLSQDQEKLAQNHIVRTVYDPACGTGGM-LTIAKEHILDHINPNANI 236

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
           K  G +++ K   I+KS+ +  G  +  D ++ D   S +G     FD I+SNPPY
Sbjct: 237 KLFGQEVNDKTFAISKSDMLIKGDDKDADNIKPDSSFSKDGHAGETFDYILSNPPY 292


>gi|315653117|ref|ZP_07906042.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
 gi|315489482|gb|EFU79119.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
          Length = 204

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +DI+ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDINERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|295694828|ref|YP_003588066.1| methyltransferase small [Bacillus tusciae DSM 2912]
 gi|295410430|gb|ADG04922.1| methyltransferase small [Bacillus tusciae DSM 2912]
          Length = 210

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 93  IEKRDVV---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           IE  DV    R+LDLG G G + +A     P  +    DI+ +A+E+AK NA    + +R
Sbjct: 50  IESMDVPKRGRVLDLGCGYGPIGIAAALLEPGVQVTMADINERAVELAKENARRLRL-QR 108

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPP 173
            +   SD F+ + +  FD +  NPP
Sbjct: 109 VEVYVSDGFAGLGDRRFDRVYCNPP 133


>gi|262193421|ref|YP_003264630.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365]
 gi|262076768|gb|ACY12737.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365]
          Length = 303

 Score = 41.2 bits (95), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R    +V R  D+G G+G + +A     P   GV VDI   A +    N   NG+SER  
Sbjct: 149 RARGVEVQRCFDVGCGSGILFIAAAGMWPACSGVAVDIDPLAADATLENCERNGLSERV- 207

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
            + +     V+G+FD++++N
Sbjct: 208 AVSTTPTEEVDGVFDLVLAN 227


>gi|300868788|ref|ZP_07113397.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333224|emb|CBN58589.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 230

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  ++  DVV   DLG+G G + +A  ++    +G+G+DI+ + +  A  NA   GVS+R
Sbjct: 92  LANVQSNDVV--YDLGSGDGRIVIAAAQKV-GARGIGIDINPERIREANENAQKAGVSDR 148

Query: 150 FDTLQSDWFSS 160
            +  Q+D F +
Sbjct: 149 VEFRQADLFQT 159


>gi|261346502|ref|ZP_05974146.1| ribosomal RNA small subunit methyltransferase [Providencia
           rustigianii DSM 4541]
 gi|282565493|gb|EFB71028.1| ribosomal RNA small subunit methyltransferase [Providencia
           rustigianii DSM 4541]
          Length = 337

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LDL  G G +   +  ++P       D+S  AL+ A +    N ++ +   + SD +S
Sbjct: 199 NVLDLACGNGVLAAVVGSQNPNVTLTLSDVSSAALDSATATLAANKLTGKI--IPSDVYS 256

Query: 160 SVEGLFDVIVSNPPYIESV 178
            +   FD I+SNPP+ + +
Sbjct: 257 EINDKFDWIISNPPFHDGI 275


>gi|2879819|emb|CAA41480.1| hypothetical protein [Pseudoalteromonas haloplanktis]
          Length = 232

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           +LD+GTGTG + L   + S       V+I   A   A  N   +    +S    T+QS  
Sbjct: 39  LLDIGTGTGLLALMCKQRSSELDITAVEIDESAYTQALQNVANSPWPTISITHQTIQS-- 96

Query: 158 FSSVEGLFDVIVSNPPY 174
           FSS E  FDV++SNPPY
Sbjct: 97  FSS-EVKFDVVISNPPY 112


>gi|325969180|ref|YP_004245372.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
 gi|323708383|gb|ADY01870.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
          Length = 200

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++ + S+ + P  E        L + +        +RI+D+G+GTG + L  L E    
Sbjct: 3   MKIIVLSNVYPP-AEDSWQTAELLRWVMSNHANDGYLRIIDVGSGTGILALTALNEIVSK 61

Query: 123 KG----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPYI 175
            G    +  D    A    + N V NG+    D +  +   ++   F  D++VSNPPY+
Sbjct: 62  GGTAWVLAADHDYNASMNTRINLVNNGLYHYADVITMNLLDAIRTRFCLDIVVSNPPYL 120


>gi|307265689|ref|ZP_07547242.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919333|gb|EFN49554.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG G+G + + +  ++      GV+I     ++A  + V N + ER   ++ D   
Sbjct: 45  KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 101

Query: 160 SVEGL--------FDVIVSNPPYI 175
            V GL        FD++ SNPPY+
Sbjct: 102 -VRGLEKILGYEKFDIVTSNPPYM 124


>gi|169825840|ref|YP_001695998.1| putative RNA methyltransferase [Lysinibacillus sphaericus C3-41]
 gi|168990328|gb|ACA37868.1| Hypothetical RNA methyltransferase [Lysinibacillus sphaericus
           C3-41]
          Length = 459

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 29/154 (18%)

Query: 41  AIVRSLKHESIHRILG------W-RDFY-----NVRLTLSSDTF-EPRPE-TELLVDSAL 86
           +I++++ HE  + I G      W +D       +VR  +S+ +F +  PE TE+L   AL
Sbjct: 246 SIMQNVNHEKTNVIFGDDTLNLWGKDVIIDTIGDVRFEISARSFYQVNPEQTEVLYKQAL 305

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ++  + ++R    ++D   G G + L L +++     +GV+I  +A+E AK NAV NG 
Sbjct: 306 DYANLQGDER----VIDAYCGIGTISLFLAQKARAV--MGVEIVPQAIEDAKRNAVLNGF 359

Query: 147 SERF------DTLQSDWFSSVEGL-FDVIVSNPP 173
           +  +      + +   W+   EG   DV+V +PP
Sbjct: 360 TNTYFEAGPAEEVIPRWYK--EGKEADVLVVDPP 391


>gi|309784610|ref|ZP_07679245.1| methyltransferase small domain protein [Shigella dysenteriae 1617]
 gi|262831201|sp|Q32CU6|TRMN6_SHIDS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|308927507|gb|EFP72979.1| methyltransferase small domain protein [Shigella dysenteriae 1617]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|229505717|ref|ZP_04395227.1| predicted O-methyltransferase [Vibrio cholerae BX 330286]
 gi|229357940|gb|EEO22857.1| predicted O-methyltransferase [Vibrio cholerae BX 330286]
          Length = 240

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSKR--FAAIICNPPYFNS 123


>gi|212697151|ref|ZP_03305279.1| hypothetical protein ANHYDRO_01717 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675926|gb|EEB35533.1| hypothetical protein ANHYDRO_01717 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 547

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L  ++K     ILDL +GTG +     K +   K +G++I  +A+E A  NA  N +
Sbjct: 303 AIELANVDKNK--NILDLYSGTGTITQLFAKSAN--KAMGIEIVEEAVEKAFDNAKENQI 358

Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173
            E  D +  D       V+G +D++V +PP
Sbjct: 359 -ENIDFIAGDVLEKINLVKGKYDIVVLDPP 387


>gi|157371913|ref|YP_001479902.1| methyltransferase small [Serratia proteamaculans 568]
 gi|262828677|sp|A8GI34|TRMN6_SERP5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157323677|gb|ABV42774.1| methyltransferase small [Serratia proteamaculans 568]
          Length = 260

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G+G+G + L L + +     +  V++   A   A  N + +  S R      D  
Sbjct: 61  RVLDIGSGSGLIALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESPWSLRIQVHAQDIH 120

Query: 159 SSVE---GLFDVIVSNPPYIESVIV 180
              +   G +D+IVSNPPY E  + 
Sbjct: 121 HFAQHHAGQYDLIVSNPPYFEPAVA 145


>gi|326389210|ref|ZP_08210778.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994573|gb|EGD52997.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 12/84 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+DLG G+G + + +  ++      GV+I     ++A  + V N + ER   ++ D   
Sbjct: 64  KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSVVINKMEERIKIIKGD--- 120

Query: 160 SVEGL--------FDVIVSNPPYI 175
            V GL        FD++ SNPPY+
Sbjct: 121 -VRGLEKILGYEKFDIVTSNPPYM 143


>gi|281602470|gb|ADA75454.1| hypothetical protein SFxv_3432 [Shigella flexneri 2002017]
          Length = 481

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 335 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 394

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193
           S VE   F+ ++ NPP+ +   + D +  E+  +  R
Sbjct: 395 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 431


>gi|110806967|ref|YP_690486.1| hypothetical protein SFV_3126 [Shigella flexneri 5 str. 8401]
 gi|110616515|gb|ABF05182.1| putative enzyme [Shigella flexneri 5 str. 8401]
          Length = 481

 Score = 40.8 bits (94), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 335 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 394

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193
           S VE   F+ ++ NPP+ +   + D +  E+  +  R
Sbjct: 395 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 431


>gi|303310641|ref|XP_003065332.1| hypothetical protein CPC735_045570 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240104994|gb|EER23187.1| hypothetical protein CPC735_045570 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 358

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 33/126 (26%)

Query: 76  PETELLVDSALAFSLP--RIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISC 131
           PE  L   +A  F L       R+  RILDLGTG G++ L LL+E   F G  VGVD S 
Sbjct: 130 PEKVLRFLTAEGFPLAPCNTSGREQPRILDLGTGNGSM-LTLLREEGGFLGDMVGVDYSE 188

Query: 132 KALEIAKSNAVTNGVS-------ERFDTLQS---------------------DWFSSVEG 163
           +++E+A+  A  +G         E +D L +                     +WF + EG
Sbjct: 189 RSVELARRLAGGDGGGQGRRIRFEVWDILAAGEGDDDDNDGSGGGNNGLDGLEWFPAAEG 248

Query: 164 LFDVIV 169
            FD+++
Sbjct: 249 GFDIVL 254


>gi|169344693|ref|ZP_02865656.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169297160|gb|EDS79274.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
          Length = 256

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEAVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    S     FDV+  NPPY
Sbjct: 98  KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY 134


>gi|89109381|ref|AP_003161.1| predicted methyltransferase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111461|ref|NP_417070.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157162055|ref|YP_001459373.1| putative methyltransferase [Escherichia coli HS]
 gi|170019142|ref|YP_001724096.1| methyltransferase small [Escherichia coli ATCC 8739]
 gi|170082184|ref|YP_001731504.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170679700|ref|YP_001744764.1| putative methyltransferase [Escherichia coli SMS-3-5]
 gi|188492006|ref|ZP_02999276.1| putative methyltransferase [Escherichia coli 53638]
 gi|194437703|ref|ZP_03069799.1| putative methyltransferase [Escherichia coli 101-1]
 gi|218706078|ref|YP_002413597.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|238901740|ref|YP_002927536.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BW2952]
 gi|253772525|ref|YP_003035356.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162550|ref|YP_003045658.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|256021738|ref|ZP_05435603.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|297519406|ref|ZP_06937792.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
 gi|307139212|ref|ZP_07498568.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|312973179|ref|ZP_07787351.1| methyltransferase small domain protein [Escherichia coli 1827-70]
 gi|331664143|ref|ZP_08365053.1| hypothetical protein ECMG_01291 [Escherichia coli TA143]
 gi|13638617|sp|P31825|TRMN6_ECOLI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828123|sp|C5W7S9|TRMN6_ECOBB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828135|sp|C6UBI3|TRMN6_ECOBR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828142|sp|C4ZYJ8|TRMN6_ECOBW RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828150|sp|B1XBQ2|TRMN6_ECODH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828154|sp|A8A386|TRMN6_ECOHS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828219|sp|B1IVQ2|TRMN6_ECOLC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828226|sp|B7N6G4|TRMN6_ECOLU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828237|sp|B1LP88|TRMN6_ECOSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|85675466|dbj|BAE76751.1| predicted methyltransferase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082131|gb|AAC75628.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157067735|gb|ABV06990.1| putative methyltransferase [Escherichia coli HS]
 gi|169754070|gb|ACA76769.1| methyltransferase small [Escherichia coli ATCC 8739]
 gi|169890019|gb|ACB03726.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170517418|gb|ACB15596.1| putative methyltransferase [Escherichia coli SMS-3-5]
 gi|188487205|gb|EDU62308.1| putative methyltransferase [Escherichia coli 53638]
 gi|194423509|gb|EDX39500.1| putative methyltransferase [Escherichia coli 101-1]
 gi|218433175|emb|CAR14073.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|238863086|gb|ACR65084.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BW2952]
 gi|242378175|emb|CAQ32950.1| tRNA m[6]A37 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323569|gb|ACT28171.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974451|gb|ACT40122.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|253978618|gb|ACT44288.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|260448345|gb|ACX38767.1| methyltransferase small [Escherichia coli DH1]
 gi|309702961|emb|CBJ02292.1| putative DNA-binding protein [Escherichia coli ETEC H10407]
 gi|310331774|gb|EFP99009.1| methyltransferase small domain protein [Escherichia coli 1827-70]
 gi|315137199|dbj|BAJ44358.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli DH1]
 gi|315615837|gb|EFU96469.1| methyltransferase small domain protein [Escherichia coli 3431]
 gi|323936315|gb|EGB32606.1| yfiC protein [Escherichia coli E1520]
 gi|323941162|gb|EGB37347.1| gyfiC [Escherichia coli E482]
 gi|323961190|gb|EGB56803.1| gyfiC [Escherichia coli H489]
 gi|323971099|gb|EGB66346.1| gyfiC [Escherichia coli TA007]
 gi|331059942|gb|EGI31919.1| hypothetical protein ECMG_01291 [Escherichia coli TA143]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|325672686|ref|ZP_08152382.1| transferase [Rhodococcus equi ATCC 33707]
 gi|325556563|gb|EGD26229.1| transferase [Rhodococcus equi ATCC 33707]
          Length = 492

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153
            R V  +LD+GTG G   +  L+ + +   V   D++ +A ++  + A  NG+   F+ L
Sbjct: 152 SRPVGTVLDVGTGCG---IQALRAADYAGTVTATDVNPRATDLTAATAALNGLD--FEIL 206

Query: 154 QSDWFSSVEG-LFDVIVSNPPYIES 177
           +  WF  V G  FD IV+NPP++ S
Sbjct: 207 EGSWFEPVAGRTFDQIVANPPFVVS 231


>gi|148260435|ref|YP_001234562.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5]
 gi|146402116|gb|ABQ30643.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5]
          Length = 239

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+++ GTG GA  L L    P  +GVG++   +   +A+ N  TNG       
Sbjct: 35  VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174
                   + G FD   +NPP+
Sbjct: 95  AADITGPPLTGPFDHAFANPPW 116


>gi|15640681|ref|NP_230310.1| hypothetical protein VC0661 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587873|ref|ZP_01677630.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153818696|ref|ZP_01971363.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822285|ref|ZP_01974952.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080842|ref|YP_002809393.1| hypothetical protein VCM66_0619 [Vibrio cholerae M66-2]
 gi|229508709|ref|ZP_04398202.1| predicted O-methyltransferase [Vibrio cholerae B33]
 gi|229519542|ref|ZP_04408985.1| predicted O-methyltransferase [Vibrio cholerae RC9]
 gi|229608736|ref|YP_002879384.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236]
 gi|254850992|ref|ZP_05240342.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255743879|ref|ZP_05417835.1| predicted O-methyltransferase [Vibrio cholera CIRS 101]
 gi|262156098|ref|ZP_06029217.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1]
 gi|298500777|ref|ZP_07010580.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|81858152|sp|Q9KU62|TRMN6_VIBCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828776|sp|C3LSR6|TRMN6_VIBCM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|9655099|gb|AAF93827.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547909|gb|EAX57993.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126510776|gb|EAZ73370.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520181|gb|EAZ77404.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227008730|gb|ACP04942.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229344231|gb|EEO09206.1| predicted O-methyltransferase [Vibrio cholerae RC9]
 gi|229354233|gb|EEO19163.1| predicted O-methyltransferase [Vibrio cholerae B33]
 gi|229371391|gb|ACQ61814.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236]
 gi|254846697|gb|EET25111.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738510|gb|EET93899.1| predicted O-methyltransferase [Vibrio cholera CIRS 101]
 gi|262030134|gb|EEY48779.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1]
 gi|297540558|gb|EFH76616.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 240

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 106 QPSKR--FAAIICNPPYFNS 123


>gi|240139856|ref|YP_002964333.1| putative methyltransferase small [Methylobacterium extorquens AM1]
 gi|254562275|ref|YP_003069370.1| methyltransferase small [Methylobacterium extorquens DM4]
 gi|240009830|gb|ACS41056.1| putative methyltransferase small [Methylobacterium extorquens AM1]
 gi|254269553|emb|CAX25519.1| putative methyltransferase small [Methylobacterium extorquens DM4]
          Length = 250

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG  TGAV LA+ + +   + V V+     + +A+ NA  NG+  R   +++D  + 
Sbjct: 44  LYDLGAATGAVGLAVARLTEVGRVVLVERDPDLVALARENAAANGLDGRVAVIEADLLAP 103

Query: 161 -----VEGL----FDVIVSNPPYIE 176
                  GL     D++++NPP+ E
Sbjct: 104 GVQRRAAGLEPDSADIVLTNPPFFE 128


>gi|182626807|ref|ZP_02954545.1| SAM-dependent methyltransferase [Clostridium perfringens D str.
           JGS1721]
 gi|177907853|gb|EDT70451.1| SAM-dependent methyltransferase [Clostridium perfringens D str.
           JGS1721]
          Length = 256

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++    +  L+    S     FDV+  NPPY
Sbjct: 98  KINNIEDKVSFVYGDLKDKELSKSMPKFDVVTVNPPY 134


>gi|18977199|ref|NP_578556.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
 gi|50401623|sp|Q8U2K7|Y827_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF0827
 gi|18892856|gb|AAL80951.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
          Length = 409

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  ++LDL +G G   L L K+   F  VGV+I+  A+E+AK +A  N ++  F   +++
Sbjct: 269 DGSKVLDLYSGIGTFSLYLTKKG--FNVVGVEINKTAVEVAKLSAELNSLNVEFKAKRAE 326

Query: 157 WFSSVEGLFDVIVSNPP 173
              ++EG +D ++ +PP
Sbjct: 327 E-ENIEG-YDALILDPP 341


>gi|332089240|gb|EGI94347.1| hypothetical protein SD15574_3021 [Shigella dysenteriae 155-74]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 79  IQQWLTQQTVRFDLIISNPPYYQQ 102


>gi|319649125|ref|ZP_08003333.1| YbxB protein [Bacillus sp. BT1B_CT2]
 gi|317388825|gb|EFV69644.1| YbxB protein [Bacillus sp. BT1B_CT2]
          Length = 184

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G + L+L  +        +D++ +A+E++K NA+ N + +     QSD F++V
Sbjct: 46  LDVGCGYGPIGLSLAADFEDRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANV 104

Query: 162 EGL--FDVIVSNPP 173
           E    F  I++NPP
Sbjct: 105 EPAKKFASIITNPP 118


>gi|313678696|ref|YP_004056436.1| methyltransferase small domain-containing protein [Mycoplasma bovis
           PG45]
 gi|312950166|gb|ADR24761.1| methyltransferase small domain protein [Mycoplasma bovis PG45]
          Length = 261

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + R+L++GT  GA+ + + + +   K   ++I  KA ++A SN + N   ++   + +D+
Sbjct: 47  IKRMLEIGTNNGALSIFISERNKNLKIDAIEIQEKAAQLASSNVILNNKQDQITVITADF 106

Query: 158 -------FSSVEGLFDVIVSNPPY 174
                     V+  ++ IV NPP+
Sbjct: 107 NDFYKEHTKLVKPKYEAIVCNPPF 130


>gi|225719536|gb|ACO15614.1| Methyltransferase-like protein 5 [Caligus clemensi]
          Length = 210

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALL 116
           +DF + ++ L      P   + LL  +  ++     E      + DLG+GTG + + A L
Sbjct: 14  QDFQHPKILLEQYPTPPHIASRLLYTAQQSY-----EDIQGSIVADLGSGTGMLSIGASL 68

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSN 171
             +    G  +D S  A+ IA  N    G+ E  D +Q D    +E     G+FD ++ N
Sbjct: 69  LGASLVNGFEIDPS--AISIALDNVKEIGLQEPLDFIQMDALRLLESTPRRGIFDTVLMN 126

Query: 172 PPY 174
           PP+
Sbjct: 127 PPF 129


>gi|313835743|gb|EFS73457.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA2]
 gi|314928416|gb|EFS92247.1| methyltransferase, HemK family [Propionibacterium acnes HL044PA1]
 gi|314970113|gb|EFT14211.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA3]
 gi|328906767|gb|EGG26539.1| methyltransferase small domain protein [Propionibacterium sp. P08]
          Length = 505

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 75  RPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           RP+  L V  A + SL +I     V R LD+G G G   L L + + +   V  D++ +A
Sbjct: 143 RPDYVLGVSPA-SVSLTQITIPTHVERALDMGCGCGVQSLHLSRHADYV--VATDVNPRA 199

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           LE+A+            D      +    G  FD+IV+NPPY+       +    RD   
Sbjct: 200 LEMARLTCRL--CHADVDIRDGSLYDPCRGDTFDLIVTNPPYV-------MAPPSRDGQR 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  +GG  G      +  G    LN  G+  V
Sbjct: 251 LVYREGGFAGDGLVEAVVRGAPARLNDGGVLQV 283


>gi|331684225|ref|ZP_08384821.1| hypothetical protein ECOG_00701 [Escherichia coli H299]
 gi|320196411|gb|EFW71035.1| putative methyltransferase [Escherichia coli WV_060327]
 gi|331079177|gb|EGI50379.1| hypothetical protein ECOG_00701 [Escherichia coli H299]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|23335469|ref|ZP_00120705.1| COG2813: 16S RNA G1207 methylase RsmC [Bifidobacterium longum
           DJO10A]
 gi|189439026|ref|YP_001954107.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A]
 gi|312132466|ref|YP_003999805.1| rsmc [Bifidobacterium longum subsp. longum BBMN68]
 gi|189427461|gb|ACD97609.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A]
 gi|291516654|emb|CBK70270.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium longum
           subsp. longum F8]
 gi|311773388|gb|ADQ02876.1| RsmC [Bifidobacterium longum subsp. longum BBMN68]
          Length = 218

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 16/87 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L  ESP      VD++ +AL++  +NA  NG +    T Q D  S+ 
Sbjct: 63  LDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHANAQANGHT-NIHTAQVDESSTP 121

Query: 162 ---------------EGLFDVIVSNPP 173
                          +  FDVI SNPP
Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|262831234|sp|Q3YYU0|TRMN6_SHISS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 40.8 bits (94), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 132


>gi|225351438|ref|ZP_03742461.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157782|gb|EEG71065.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 247

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L   SP      +D++ +AL++ + NA  NGV      + +D   S 
Sbjct: 109 LDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGV-RNVHAVTADEIPS- 166

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           +  FD+I SNPP    V  D L   +  + PR++  G
Sbjct: 167 DMTFDLIWSNPPI--RVGKDVLHELLMTWLPRLNAGG 201


>gi|254424091|ref|ZP_05037809.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
 gi|196191580|gb|EDX86544.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
          Length = 426

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   R  + + VRILD G GTG     L+  +P  + VG+D+S  A+ +AK     
Sbjct: 65  AAYSFCTGRKPETNSVRILDAGCGTGVSTEYLVHLNPEAEVVGIDLSAGAIAVAKERCQR 124

Query: 144 NGV--SERFDTLQSDWFSSVEGLFDVI 168
           +G   +  ++T   D    + G FD+I
Sbjct: 125 SGADRASFYNTSIYD-VEQIPGKFDLI 150


>gi|218767557|ref|YP_002342069.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           Z2491]
 gi|38605480|sp|Q9JW08|PRMA_NEIMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|121051565|emb|CAM07863.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis Z2491]
 gi|319409821|emb|CBY90129.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria
           meningitidis WUE 2594]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK    F  VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAGF-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|218701089|ref|YP_002408718.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|262828101|sp|B7NRM8|TRMN6_ECO7I RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218371075|emb|CAR18902.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|323188310|gb|EFZ73602.1| methyltransferase small domain protein [Escherichia coli RN587/1]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|163852522|ref|YP_001640565.1| methyltransferase small [Methylobacterium extorquens PA1]
 gi|163664127|gb|ABY31494.1| methyltransferase small [Methylobacterium extorquens PA1]
          Length = 250

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 9/85 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG  TGAV LA+ + S   + V V+     + +A+ NA  NG+  R   +++D  + 
Sbjct: 44  LYDLGAATGAVGLAVARLSEAGRVVLVERDTDLVALARENASANGLDGRVAVIEADLLAP 103

Query: 161 -----VEGL----FDVIVSNPPYIE 176
                  GL     D++++NPP+ E
Sbjct: 104 GAQRRAAGLEPDSADIVLTNPPFFE 128


>gi|168334727|ref|ZP_02692859.1| ribosomal protein L11 methyltransferase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 312

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG+G + +   K       +GVDI   ++++A  N   NGV++    +Q D   
Sbjct: 177 RVLDVGTGSGILGIVAAKLGASV--LGVDIDPMSVKVAIENVAINGVADDMAVVQGDLLE 234

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            V    D+++SN   I  VI+  L  +VR
Sbjct: 235 VVAEKADIVISN--IIADVII-VLAAQVR 260


>gi|268611918|ref|ZP_06145645.1| type I restriction-modification system methylation subunit
           [Ruminococcus flavefaciens FD-1]
          Length = 534

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +  + +  G ++S     +A+ N   +GV    
Sbjct: 217 EDKQGLLVYDAAMGSGSLLLNARKFSHKPDYIRYFGQELSTTTYNLARMNMFLHGVDPEN 276

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +  E  FD+++ NPPY
Sbjct: 277 QTLRNADTLDADWPTDEETDFDMVLMNPPY 306


>gi|117164966|emb|CAJ88518.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 220

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             +V   +    + P+ +T LL  +    SLP         +LD+GTG     LA+    
Sbjct: 1   MASVNFMVLPGVYAPQEDTALLTGALSDESLP-----PAASVLDVGTG--TGALAVAAAR 53

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
              +   VD+S +A+  A+ NA  +GV  R      + F+ V G  FD++++NPPY+ +
Sbjct: 54  RGARVTAVDVSWRAVCAARVNAARSGV--RIRVRHGNLFTPVRGETFDLVLANPPYVPA 110


>gi|313679199|ref|YP_004056938.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase;
           demethylmenaquinone methyltransferase [Oceanithermus
           profundus DSM 14977]
 gi|313151914|gb|ADR35765.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase;
           demethylmenaquinone methyltransferase [Oceanithermus
           profundus DSM 14977]
          Length = 234

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+ TGTG V L L +  P  + VG D + + LE+A++ A   G+  RF    +    
Sbjct: 52  RILDVATGTGDVALLLKRARPEAEVVGGDFTPQMLELARAKAERAGLDVRFVEADALALP 111

Query: 160 SVEGLFDVIV 169
             +  FD + 
Sbjct: 112 FADASFDAVT 121


>gi|300922296|ref|ZP_07138421.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
 gi|300421358|gb|EFK04669.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN      R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALNRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|283788330|ref|YP_003368195.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           rodentium ICC168]
 gi|282951784|emb|CBG91493.1| putative ribosomal RNA small subunit methyltransferase D
           [Citrobacter rodentium ICC168]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQAKVVFVDESPMAVASSRLNVETNLPDAVDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|28202126|gb|AAO27746.2| putative methyltransferase [Fusarium sporotrichioides]
          Length = 348

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 80  LLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           LL+  AL A  LP+ + +   RILDLG GTG   + +  E P     G+D+S    +   
Sbjct: 94  LLLGGALHAAPLPKSDDQSDYRILDLGCGTGIWAIEMADEYPNASVAGIDLSPIQPDWVP 153

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           SN V +      D  + +W       FD I
Sbjct: 154 SNCVFH-----VDDYEDEWTYREHERFDYI 178


>gi|307243528|ref|ZP_07525676.1| THUMP domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493084|gb|EFM65089.1| THUMP domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 382

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 3/64 (4%)

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNP 172
           LLK+   F   G DI  +++EIAK+NA   GV +  RF+   +  F+S E  +  I++NP
Sbjct: 249 LLKDDESFTIYGYDIDPESIEIAKNNAEIAGVEKYIRFECRDATKFASNEE-YGFIITNP 307

Query: 173 PYIE 176
           PY E
Sbjct: 308 PYGE 311


>gi|37520580|ref|NP_923957.1| hypothetical protein glr1011 [Gloeobacter violaceus PCC 7421]
 gi|35211574|dbj|BAC88952.1| glr1011 [Gloeobacter violaceus PCC 7421]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +++V + L   L R+ K D   ++DLG G G + +   +E    +G+GVDI+ + +E
Sbjct: 36  PTADVVVAAML--KLARVGKDDY--LIDLGCGDGRIVVTAAREH-GTRGLGVDIAPELVE 90

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
           ++++NA   GV ER    + D F +
Sbjct: 91  LSRTNARRAGVDERVRFAEQDLFQT 115


>gi|299541918|ref|ZP_07052241.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1]
 gi|298725656|gb|EFI66297.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1]
          Length = 200

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D   AF +P I+      I D+G G G + L++ K +P      +DI+ +A+ ++
Sbjct: 46  SRVLID---AFQMPDIDGA----IFDVGCGYGPIGLSIAKTNPDRTVFMMDINERAVALS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173
           + NA  NGV +      SD  S V+   D   I++NPP
Sbjct: 99  QKNAQVNGV-QNVRIFVSDGLSMVDNDVDAAAILTNPP 135


>gi|261337500|ref|ZP_05965384.1| putative methyltransferase small domain protein [Bifidobacterium
           gallicum DSM 20093]
 gi|270277897|gb|EFA23751.1| putative methyltransferase small domain protein [Bifidobacterium
           gallicum DSM 20093]
          Length = 218

 Score = 40.8 bits (94), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG+G G + LA+  ++P  +   VD++ +++++ + NA  NG +        D    V
Sbjct: 78  LDLGSGWGPIALAMALDAPDARVYAVDVNERSIDLTRENAQANGCANIVAGTAQDVPDDV 137

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              F  I SNPP    +  + L   +  + PR+  DG
Sbjct: 138 R--FARIWSNPPI--RIGKEALHELLMTWLPRLEPDG 170


>gi|297565090|ref|YP_003684062.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           silvanus DSM 9946]
 gi|296849539|gb|ADH62554.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           silvanus DSM 9946]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           IEK+   RILDL TGTG + L L + +P  + +G D +   LEIA+  A   G+   F  
Sbjct: 51  IEKKPR-RILDLATGTGDMALLLKRLAPQAEVIGADFALPMLEIARQKARKLGLEIPFQQ 109

Query: 153 LQSDWFSSVEGLFDVIV 169
             +      +  FD + 
Sbjct: 110 ADALALPFPDARFDAVT 126


>gi|294668436|ref|ZP_06733536.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309589|gb|EFE50832.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 370

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTG+G V  ALL +    +    D + +AL  A  N    G+  +     +D F   
Sbjct: 196 FDIGTGSG-VLAALLAKRGLRQITATDNNPRALSCAGDNIRRLGLQRQIGIEAADLFP-- 252

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           EG  D+IV NPP++ +       +E   +DP  ++   + G  H      G   HLN  G
Sbjct: 253 EGCADLIVCNPPWLPAKPTSA--VETALYDPDHAM---LRGFLH------GARSHLNSGG 301


>gi|237706154|ref|ZP_04536635.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226899194|gb|EEH85453.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 414

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 268 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 327

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 328 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 358


>gi|297190845|ref|ZP_06908243.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197722290|gb|EDY66198.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 289

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V R+LD+G+G G +   L +  P+ + V VD +   LE A++ A  +G ++R  T  ++ 
Sbjct: 48  VRRVLDIGSGPGVITGLLAEAFPYAEVVAVDATAPLLERAQARAARHGQADRVRTHHAEL 107

Query: 158 FSSVEGLFDV 167
              +E L + 
Sbjct: 108 PDGIEELGEA 117


>gi|113474212|ref|YP_720273.1| methyltransferase small [Trichodesmium erythraeum IMS101]
 gi|123352776|sp|Q119M4|TRMN6_TRIEI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110165260|gb|ABG49800.1| methyltransferase small [Trichodesmium erythraeum IMS101]
          Length = 239

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFK----GVGVDI--SCKALEIAKSNAVTNGVSERFDTL 153
           +ILD+GTGTG + L L + S   K     V +DI  S +A E  + +  ++ V     ++
Sbjct: 40  KILDIGTGTGLIALMLAQRSSQLKVDIDAVEIDINSSIQARENVERSRWSDRVKVENYSI 99

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESV 178
           Q  +    +  +D+IVSNPP+ E+ 
Sbjct: 100 QK-YIDICQKRYDLIVSNPPFFENA 123


>gi|322371733|ref|ZP_08046276.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus
           paucihalophilus DX253]
 gi|320548618|gb|EFW90289.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus
           paucihalophilus DX253]
          Length = 201

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-S 159
           +LDLGTGTGA+ LAL   +   + +G DIS   L+ A++ A  NG+ E  +  +  +   
Sbjct: 47  VLDLGTGTGAIALALAPGAE--RVIGRDISEGMLDEARTKAEENGI-ENVEFGEGRFRDP 103

Query: 160 SVEGLFDVIVSN 171
           +V+G  D++VSN
Sbjct: 104 NVDGEVDIVVSN 115


>gi|312139425|ref|YP_004006761.1| methyltransferase [Rhodococcus equi 103S]
 gi|311888764|emb|CBH48076.1| putative methyltransferase [Rhodococcus equi 103S]
          Length = 492

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 7/84 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R V  +LD+GTG G   +  L+ + +   V   D++ +A ++  + A  NG+   F+ L+
Sbjct: 153 RPVGTVLDVGTGCG---IQALRAADYAGTVTATDVNPRATDLTAATAALNGLD--FEILE 207

Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177
             WF  V G  FD IV+NPP++ S
Sbjct: 208 GSWFEPVAGRTFDQIVANPPFVVS 231


>gi|307325108|ref|ZP_07604312.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
 gi|306889254|gb|EFN20236.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
          Length = 540

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 27/40 (67%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
             R+LDLG G G +  ALLKE+ F + VGVD+S +AL  A
Sbjct: 323 AARVLDLGCGQGQLLGALLKEARFTEIVGVDVSMRALNEA 362


>gi|257898723|ref|ZP_05678376.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|257836635|gb|EEV61709.1| conserved hypothetical protein [Enterococcus faecium Com15]
          Length = 186

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +     +  V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRGCSY-AVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130


>gi|161506215|ref|YP_001573327.1| hypothetical protein SARI_04407 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|229564340|sp|A9MPU2|RLMG_SALAR RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|160867562|gb|ABX24185.1| hypothetical protein SARI_04407 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L+LL ++P    V VD S  A++ ++ N  TN     ER + + ++  
Sbjct: 232 IVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNMPEAFERCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ +  NPP+ +   + D +  E+
Sbjct: 292 SGVEPYRFNAVFCNPPFHQKHALTDNIAWEM 322


>gi|110642737|ref|YP_670467.1| hypothetical protein ECP_2577 [Escherichia coli 536]
 gi|123048967|sp|Q0TER3|TRMN6_ECOL5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110344329|gb|ABG70566.1| hypothetical protein YfiC [Escherichia coli 536]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|313127040|ref|YP_004037310.1| methyltransferase [Halogeometricum borinquense DSM 11551]
 gi|312293405|gb|ADQ67865.1| methyltransferase [Halogeometricum borinquense DSM 11551]
          Length = 342

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 14/108 (12%)

Query: 79  ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E L+D A  +  PR+  E+  VV       R+ D+  G G   + + K     + VG D+
Sbjct: 162 EFLLDIAEVYFSPRLATERHRVVQQVTEGERVFDMFAGVGPFVIPMAKRGA--EVVGCDL 219

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPY 174
           +  A+E  + NA  NGV ER    Q    D     EG  + IV N P+
Sbjct: 220 NAAAVEYLRENARRNGVEERVTARQGDVRDVADDYEGWANRIVMNLPH 267


>gi|306814361|ref|ZP_07448523.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|222034280|emb|CAP77021.1| Uncharacterized protein yfiC [Escherichia coli LF82]
 gi|305851755|gb|EFM52207.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|312947147|gb|ADR27974.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|254502874|ref|ZP_05115025.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11]
 gi|222438945|gb|EEE45624.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11]
          Length = 347

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R  DLG G G +   +L+++P    + + +   +AL++A+ N       +    + SD  
Sbjct: 201 RGADLGAGFGYLSRQVLEKAPKVAALDLYEAEKRALDLAEQNLAPFKGKKAMTGIWSDVT 260

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
             +EG +D +VSNPP+ +S   D
Sbjct: 261 KGIEGPYDFLVSNPPFHQSGKAD 283


>gi|254446424|ref|ZP_05059900.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235]
 gi|198260732|gb|EDY85040.1| Methyltransferase domain family [Verrucomicrobiae bacterium DG1235]
          Length = 232

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +D+++ R +T    + +L   L  +  E  +  RIL +G GTGA  LAL K  P ++ + 
Sbjct: 15  ADSYDSRWKTLAPFNESLHLQLALVLSELPEHARILCVGAGTGAELLALAKRYPKWRFLA 74

Query: 127 VDISCKALEIAKSNAVTNGVSER 149
           VD S   LE+ +     +G S+R
Sbjct: 75  VDPSQSMLEVCQRKVEESGFSDR 97


>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 33/216 (15%)

Query: 62  NVRLTLS-SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALL 116
            +RL  S ++ +EP  ++  LVD+ LA     +E    +  +++G G+G V     L L 
Sbjct: 726 QIRLVSSHNEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEIGCGSGYVITSLALILG 784

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172
           +E      +  DI+  A+++ +     +GV      + +D  S +E    G+ DV+V NP
Sbjct: 785 QEGSGVNYIATDINPHAVKVTRETIEAHGVDAEL--IITDIASGLENRLAGMIDVMVVNP 842

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLS---HYRTIADG----------VSRHLNK 219
           PY+ +        EV       S  GG +G S       +AD           V+   N 
Sbjct: 843 PYVPTPEA-----EVGSEGITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANN 897

Query: 220 DGLCSVEI---GYNQKVDVVRIFESRKLFLVNAFKD 252
                +E+   GY  K+ V R  E   L ++  ++D
Sbjct: 898 PSEICLEMRKKGYTSKIVVQRSTEEESLHIIKFWRD 933


>gi|195117672|ref|XP_002003371.1| GI22924 [Drosophila mojavensis]
 gi|193913946|gb|EDW12813.1| GI22924 [Drosophila mojavensis]
          Length = 220

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           L++G+G+G +  AL K  +     +  DI+ KA E  K  A+ NG   R D+L+ +   +
Sbjct: 47  LEIGSGSGVIITALAKRLANTTHCLATDINPKACEATKRTAIRNGA--RLDSLRCNLTDA 104

Query: 161 V-EGLFDVIVSNPPYI 175
           +     D+++ NPPY+
Sbjct: 105 LRRRCIDLLLFNPPYV 120


>gi|154684624|ref|YP_001419785.1| YbxB [Bacillus amyloliquefaciens FZB42]
 gi|154350475|gb|ABS72554.1| YbxB [Bacillus amyloliquefaciens FZB42]
          Length = 201

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF  P I+       LD G G G + L+L  E        +D++ +A+E++  NA  NG+
Sbjct: 52  AFEEPEIDGD----FLDAGCGYGPIGLSLAGEFTDRTVHMIDVNERAVELSNENAEKNGI 107

Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173
            +     QSD FS+++    F  I++NPP
Sbjct: 108 -KNVRIYQSDLFSNIDSAQTFASIITNPP 135


>gi|52079174|ref|YP_077965.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC
           14580]
 gi|52784541|ref|YP_090370.1| YefA [Bacillus licheniformis ATCC 14580]
 gi|52002385|gb|AAU22327.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC
           14580]
 gi|52347043|gb|AAU39677.1| YefA [Bacillus licheniformis ATCC 14580]
          Length = 462

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 29/159 (18%)

Query: 36  FFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELL 81
           F    +IV+++  +  + I G      W + Y       ++  +S+ +F +  PE T++L
Sbjct: 240 FPHVKSIVQNINPKKTNVIFGDETTVIWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVL 299

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D AL ++    E+     ++D   G G + L L K++   K  GV+I  +A+E AK NA
Sbjct: 300 YDKALEYAELNGEET----VIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNA 353

Query: 142 VTNGV-SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173
             NG+ +  F+  +++     W+   EG+  D +V +PP
Sbjct: 354 ELNGIENAEFEVGEAEVVIPKWYE--EGIAADTLVVDPP 390


>gi|332092601|gb|EGI97673.1| hypothetical protein SB359474_2998 [Shigella boydii 3594-74]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWLTQQTVRFDLIISNPPYYQQG-VEC 106


>gi|297627202|ref|YP_003688965.1| transferase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922967|emb|CBL57549.1| transferase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 505

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           RP   L V  A + SL ++   D V   LDLG G G   L L + +        DI+ +A
Sbjct: 145 RPNYVLGVSPA-STSLAQLTVPDRVGSALDLGAGCGVQSLHLARHADTV--TLTDINPRA 201

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L++A+     NG+    D     ++  V    FD+IV+NPPY+ S   D         D 
Sbjct: 202 LDMARLTLALNGLD--LDVRAGSFYEPVAHDSFDLIVTNPPYVMSPPTDAA-------DR 252

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  +GG  G    R +    + HL   GL  V
Sbjct: 253 LVYREGGFAGDGLVRHVVREGASHLADGGLLQV 285


>gi|170765846|ref|ZP_02900657.1| methyltransferase family protein [Escherichia albertii TW07627]
 gi|170124992|gb|EDS93923.1| methyltransferase family protein [Escherichia albertii TW07627]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|215487919|ref|YP_002330350.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218559496|ref|YP_002392409.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli S88]
 gi|227887611|ref|ZP_04005416.1| methyltransferase [Escherichia coli 83972]
 gi|312965491|ref|ZP_07779723.1| methyltransferase small domain protein [Escherichia coli 2362-75]
 gi|331658720|ref|ZP_08359664.1| hypothetical protein ECKG_04543 [Escherichia coli TA206]
 gi|262828199|sp|B7UH15|TRMN6_ECO27 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828208|sp|B7MIR0|TRMN6_ECO45 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831334|sp|Q8FF14|TRMN6_ECOL6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831340|sp|Q1R8F7|TRMN6_ECOUT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831362|sp|A1AEA5|TRMN6_ECOK1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|215265991|emb|CAS10400.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218366265|emb|CAR04012.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|227835961|gb|EEJ46427.1| methyltransferase [Escherichia coli 83972]
 gi|281179624|dbj|BAI55954.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294494020|gb|ADE92776.1| putative methyltransferase [Escherichia coli IHE3034]
 gi|307554594|gb|ADN47369.1| putative methyltransferase [Escherichia coli ABU 83972]
 gi|307625876|gb|ADN70180.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|312289911|gb|EFR17799.1| methyltransferase small domain protein [Escherichia coli 2362-75]
 gi|323949229|gb|EGB45120.1| hypothetical protein ERKG_04430 [Escherichia coli H252]
 gi|330912343|gb|EGH40853.1| putative O-methyltransferase [Escherichia coli AA86]
 gi|331054385|gb|EGI26412.1| hypothetical protein ECKG_04543 [Escherichia coli TA206]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 ILQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|13471576|ref|NP_103142.1| hypothetical protein mll1589 [Mesorhizobium loti MAFF303099]
 gi|14022318|dbj|BAB48928.1| mll1589 [Mesorhizobium loti MAFF303099]
          Length = 340

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145
           A  L  + KR    +LDLGTGTG +       SP ++ GVG+D+S + L +A++N    G
Sbjct: 142 AAMLKLVGKRPFQSMLDLGTGTGRLLEIF---SPLYRRGVGIDMSREMLTVARANLDKAG 198

Query: 146 VSERFDTLQSDWFS 159
           VS      Q D FS
Sbjct: 199 VSN-AQVRQGDIFS 211


>gi|300935709|ref|ZP_07150678.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300459098|gb|EFK22591.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 257

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 57  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144


>gi|293406017|ref|ZP_06650009.1| O-methyltransferase [Escherichia coli FVEC1412]
 gi|298381817|ref|ZP_06991416.1| yfiC protein [Escherichia coli FVEC1302]
 gi|291428225|gb|EFF01252.1| O-methyltransferase [Escherichia coli FVEC1412]
 gi|298279259|gb|EFI20773.1| yfiC protein [Escherichia coli FVEC1302]
          Length = 257

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 57  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144


>gi|118475607|ref|YP_892128.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414833|gb|ABK83253.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40]
          Length = 261

 Score = 40.8 bits (94), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           I+D+G GTG V + L  +    K  G+D+S   LE+ +++A T G+     T  SDW S 
Sbjct: 45  IIDIGCGTGTVAIPLASKGA--KVCGIDLSPGMLEVLENDAKTLGIDSLITTFISDWDSY 102

Query: 160 SVEGLFDVIVSN 171
            ++  FD+++++
Sbjct: 103 EIKDKFDIVLTS 114


>gi|323167786|gb|EFZ53481.1| hypothetical protein SS53G_1987 [Shigella sonnei 53G]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWLTQQTVRFDLIISNPPYYQQG-VEC 106


>gi|319647052|ref|ZP_08001278.1| YefA protein [Bacillus sp. BT1B_CT2]
 gi|317390876|gb|EFV71677.1| YefA protein [Bacillus sp. BT1B_CT2]
          Length = 458

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 29/159 (18%)

Query: 36  FFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRPE-TELL 81
           F    +IV+++  +  + I G      W + Y       ++  +S+ +F +  PE T++L
Sbjct: 240 FPHVKSIVQNINPKKTNVIFGDETTVIWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVL 299

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D AL ++    E+     ++D   G G + L L K++   K  GV+I  +A+E AK NA
Sbjct: 300 YDKALEYAELNGEET----VIDAYCGIGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNA 353

Query: 142 VTNGV-SERFDTLQSD-----WFSSVEGL-FDVIVSNPP 173
             NG+ +  F+  +++     W+   EG+  D +V +PP
Sbjct: 354 ELNGIENAEFEVGEAEVVIPKWYE--EGIAADTLVVDPP 390


>gi|315644350|ref|ZP_07897490.1| methyltransferase small [Paenibacillus vortex V453]
 gi|315280227|gb|EFU43519.1| methyltransferase small [Paenibacillus vortex V453]
          Length = 255

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           RILD+ TG G V + LL         G++I  +  ++A+ +   NG+ E+    + D   
Sbjct: 51  RILDMCTGNGVVPI-LLSTRTGAPIEGIEIQPRLADMARRSVTMNGLQEQITIHEGDLRE 109

Query: 157 -WFSSVEGLFDVIVSNPPYI 175
            +     G +D+I  NPPY+
Sbjct: 110 LYKEKGYGAYDLITVNPPYM 129


>gi|260857211|ref|YP_003231102.1| putative methyltransferase small domain [Escherichia coli O26:H11
           str. 11368]
 gi|257755860|dbj|BAI27362.1| predicted methyltransferase small domain [Escherichia coli O26:H11
           str. 11368]
 gi|323154541|gb|EFZ40741.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           EPECa14]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|218551605|ref|YP_002385397.1| methyltransferase small domain [Escherichia fergusonii ATCC 35469]
 gi|218359147|emb|CAQ91810.1| putative methyltransferase small domain [Escherichia fergusonii
           ATCC 35469]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|239917256|ref|YP_002956814.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
 gi|281414266|ref|ZP_06246008.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
 gi|239838463|gb|ACS30260.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
          Length = 211

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LD+G G G + L L   SP  +   V+++ ++L++ + NA   G+         D   
Sbjct: 66  RFLDVGAGWGPIALTLALRSPEAEVTAVEVNDRSLQLTRDNAAALGLGNVVALRPEDVPE 125

Query: 160 SVEGLFDVIVSNPP 173
             E  FD+I SNPP
Sbjct: 126 GAE--FDLIWSNPP 137


>gi|220927646|ref|YP_002504555.1| methyltransferase small [Clostridium cellulolyticum H10]
 gi|219997974|gb|ACL74575.1| methyltransferase small [Clostridium cellulolyticum H10]
          Length = 196

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G V +   K       +  D+   A+++A  NA+ N V +    L+SD F 
Sbjct: 48  KVLDLGCGYGVVGILASKIVGPENVIMTDVDENAIKLAIENALINSV-DSIKILKSDGFK 106

Query: 160 SV-EGLFDVIVSNPPY 174
            + E  F +I+SNPPY
Sbjct: 107 ELKESGFSIILSNPPY 122


>gi|42573814|ref|NP_975003.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana]
 gi|10177517|dbj|BAB10912.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
 gi|332010821|gb|AED98204.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana]
          Length = 380

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL+ +     V V++  + +EI +     +G +++   +Q D   +
Sbjct: 93  VLEIGPGTGNLTMKLLEAAQNV--VAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKT 150

Query: 161 VEGLFDVIVSNPPY 174
               FD++V+N PY
Sbjct: 151 DFPHFDLVVANIPY 164


>gi|92114677|ref|YP_574605.1| rRNA (guanine-N(2)-)-methyltransferase [Chromohalobacter salexigens
           DSM 3043]
 gi|122419455|sp|Q1QUF2|RSMC_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91797767|gb|ABE59906.1| 16S rRNA m(2)G 1207 methyltransferase [Chromohalobacter salexigens
           DSM 3043]
          Length = 333

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G +   L       +   VD+   A+   +     NGV+   +  QSD F 
Sbjct: 195 RVLDVGCGDGILGAWLGVRG--AQVAAVDLDAFAVAATRRTFQANGVAG--EAWQSDVFG 250

Query: 160 SVEGLFDVIVSNPPYIESVIVD 181
            V G +D IVSNPP+ +   +D
Sbjct: 251 DVSGSYDAIVSNPPFHQQRAID 272


>gi|187732632|ref|YP_001881841.1| methyltransferase family protein [Shigella boydii CDC 3083-94]
 gi|229470407|sp|B2U1T3|RLMG_SHIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|187429624|gb|ACD08898.1| methyltransferase family protein [Shigella boydii CDC 3083-94]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|331648887|ref|ZP_08349975.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M605]
 gi|330909150|gb|EGH37664.1| 23S rRNA (guanine-N-2-) -methyltransferase rlmG [Escherichia coli
           AA86]
 gi|331042634|gb|EGI14776.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M605]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|293416522|ref|ZP_06659161.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B185]
 gi|291431878|gb|EFF04861.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B185]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|24114379|ref|NP_708889.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30064427|ref|NP_838598.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|81837977|sp|Q821A5|RLMG_SHIFL RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|24053548|gb|AAN44596.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30042686|gb|AAP18409.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|313648421|gb|EFS12864.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           2a str. 2457T]
 gi|332752763|gb|EGJ83148.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-671]
 gi|332754595|gb|EGJ84961.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           2747-71]
 gi|332765077|gb|EGJ95304.1| 23S rRNA methyltransferase [Shigella flexneri 2930-71]
 gi|333014758|gb|EGK34103.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-304]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193
           S VE   F+ ++ NPP+ +   + D +  E+  +  R
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 328


>gi|328554280|gb|AEB24772.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           TA208]
 gi|328912677|gb|AEB64273.1| Ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           LL3]
          Length = 311

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93
            W+ +Y+         +  + +T+ P    EL++  D  +AF             +L RI
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172

Query: 94  -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +K D  R++D+GTG+G  ++  A+L+          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
           +  Q++    + G  DVIV+N
Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248


>gi|329901539|ref|ZP_08272847.1| modification methylase, HemK family [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549082|gb|EGF33683.1| modification methylase, HemK family [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 319

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           DI+  AL  A  NA   G+  R      D F++V+G FD+I+SNPPY+
Sbjct: 168 DINPTALRYAAINADVAGIPVRLAL--GDTFAAVDGQFDLIISNPPYL 213


>gi|296241975|ref|YP_003649462.1| methyltransferase [Thermosphaera aggregans DSM 11486]
 gi|296094559|gb|ADG90510.1| methyltransferase [Thermosphaera aggregans DSM 11486]
          Length = 287

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 65/157 (41%), Gaps = 19/157 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  S  RI +  +V  LD  TG G   +  + E    K V  +I    L IA+ N  
Sbjct: 121 DATLKASRARIRQGSIV--LDTCTGLGYTAITSI-ERGASKIVSTEIDPTVLWIAERNPW 177

Query: 143 TNGV-SERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + G+  ER   +  D  + V+ L    FD I+ +PP   +   D  GLE      R+   
Sbjct: 178 SRGLRDERITIINDDVLNLVKYLEDSFFDRIIHDPPRFSASTGDLYGLEFYRELFRVLKP 237

Query: 198 GGIDGLSHYR---------TIADGVSRHLNKDGLCSV 225
           GGI  L HY          +I  G+   L K G   V
Sbjct: 238 GGI--LYHYTGLPGFKSNYSILKGIKNRLEKAGFSRV 272


>gi|294101532|ref|YP_003553390.1| (uracil-5)-methyltransferase [Aminobacterium colombiense DSM 12261]
 gi|293616512|gb|ADE56666.1| (uracil-5)-methyltransferase [Aminobacterium colombiense DSM 12261]
          Length = 365

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 14/114 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A AF  P+ EK  V+   DL  G+GA     + +      VGV+ S +A+E A SNA
Sbjct: 207 LDEAEAFLSPK-EKEGVI---DLYCGSGASLKRWIGKG--CHTVGVETSAEAIESAGSNA 260

Query: 142 -----VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY--IESVIVDCLGLEVR 188
                +    S+R   L + W  ++EG   +   NPP   IES +   L L+ R
Sbjct: 261 PGALLLRGTCSQRIPQL-AQWIETIEGYERLAYLNPPRTGIESDVRQWLALKAR 313


>gi|213408367|ref|XP_002174954.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
 gi|212003001|gb|EEB08661.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
          Length = 272

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R  ++  V ++ AF LP +  +D +RILD+G G G + +   +  P  + +G+D+S   +
Sbjct: 16  RSHSKRTVRNSAAFVLPFL--KDGMRILDIGCGPGTITIDFARMLPQAQVIGIDMSKDVI 73

Query: 135 EIAKSNA 141
            IA+ NA
Sbjct: 74  NIAEENA 80


>gi|194432131|ref|ZP_03064420.1| putative methyltransferase [Shigella dysenteriae 1012]
 gi|194419660|gb|EDX35740.1| putative methyltransferase [Shigella dysenteriae 1012]
          Length = 285

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQ 168


>gi|150024451|ref|YP_001295277.1| hypothetical protein FP0346 [Flavobacterium psychrophilum JIP02/86]
 gi|262828321|sp|A6GWI6|TRMN6_FLAPJ RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|149770992|emb|CAL42459.1| Protein of unknown function YfiC [Flavobacterium psychrophilum
           JIP02/86]
          Length = 234

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           + ILD+G GTG + L L + +   +   ++I  +A E A  N   +  S+R     +   
Sbjct: 36  ISILDIGAGTGLIALMLAQRTSAVQIDALEIDEEAYEQATDNFENSPWSDRLFCYHAGLD 95

Query: 156 DWFSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           ++    E  +D+IV NPP Y E+   +    E RD   R S     D +  +  + +   
Sbjct: 96  EFVEEPEDEYDLIVCNPPFYAENYKTNS---EQRDL-ARFS-----DAMP-FEELIEAAD 145

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             L+++G+ SV I Y ++   V +    +L+ +
Sbjct: 146 LLLSENGILSVIIPYKEEEKFVTLANEFELYPI 178


>gi|78213710|ref|YP_382489.1| hypothetical protein Syncc9605_2195 [Synechococcus sp. CC9605]
 gi|78198169|gb|ABB35934.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 400

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  RILD G GTG     L   +P    +GVDIS  AL +A+     +G +E+  +L+ +
Sbjct: 69  EAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCRRSGAAEQVTSLRQE 128

Query: 157 WFS----SVEGLFDVIVS 170
             S    S EG FD I S
Sbjct: 129 QRSLLDLSDEGSFDYINS 146


>gi|26249673|ref|NP_755713.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli CFT073]
 gi|91212513|ref|YP_542499.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli UTI89]
 gi|117625393|ref|YP_858716.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli APEC O1]
 gi|191172240|ref|ZP_03033783.1| methyltransferase family protein [Escherichia coli F11]
 gi|218560168|ref|YP_002393081.1| methyltransferase small domain [Escherichia coli S88]
 gi|227887809|ref|ZP_04005614.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           83972]
 gi|293412462|ref|ZP_06655185.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B354]
 gi|300973026|ref|ZP_07172050.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|300977562|ref|ZP_07173962.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|301048074|ref|ZP_07195114.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|331684737|ref|ZP_08385329.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H299]
 gi|81474337|sp|Q8FDE5|RLMG_ECOL6 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|122422364|sp|Q1R6P6|RLMG_ECOUT RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470495|sp|A1AG02|RLMG_ECOK1 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|26110101|gb|AAN82287.1|AE016767_47 Putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli CFT073]
 gi|91074087|gb|ABE08968.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli UTI89]
 gi|115514517|gb|ABJ02592.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli APEC O1]
 gi|190907550|gb|EDV67146.1| methyltransferase family protein [Escherichia coli F11]
 gi|218366937|emb|CAR04708.1| putative methyltransferase small domain [Escherichia coli S88]
 gi|227835205|gb|EEJ45671.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           83972]
 gi|284923112|emb|CBG36205.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 042]
 gi|291469233|gb|EFF11724.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B354]
 gi|294490632|gb|ADE89388.1| methyltransferase family protein [Escherichia coli IHE3034]
 gi|300300088|gb|EFJ56473.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300308252|gb|EFJ62772.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300410918|gb|EFJ94456.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|307555189|gb|ADN47964.1| methyltransferase family protein [Escherichia coli ABU 83972]
 gi|307625304|gb|ADN69608.1| putative methyltransferase small domain protein [Escherichia coli
           UM146]
 gi|315288871|gb|EFU48269.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|315294960|gb|EFU54297.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|323951385|gb|EGB47260.1| methyltransferase small domain-containing protein [Escherichia coli
           H252]
 gi|323957757|gb|EGB53471.1| methyltransferase small domain-containing protein [Escherichia coli
           H263]
 gi|324012058|gb|EGB81277.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
 gi|331078352|gb|EGI49558.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H299]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|324008432|gb|EGB77651.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  ILQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|323491700|ref|ZP_08096878.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
 gi|323314062|gb|EGA67148.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 14/157 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD 156
           +  +LDLG G G + + + + +P  K   +D S  A+E A+ N ++N  SER  + + ++
Sbjct: 231 IKHVLDLGCGNGVLSIKMGQLNPDIKLTCIDESFMAVESARQNLISNLGSERDIECIANN 290

Query: 157 WFSSVEGL-FDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +     D+++ NPP+  +  I D +  ++     +I   GG       + +  G +
Sbjct: 291 CLDGMPATDVDMVMCNPPFHQQQAITDHIAWQMFCDAKQILSVGG-------QLLVIG-N 342

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           RHL  DG  S   G   K +V  +  ++K  ++ A K
Sbjct: 343 RHLGYDGKLSRLFG---KSNVKVVAANKKFVILQATK 376


>gi|300898310|ref|ZP_07116658.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300927701|ref|ZP_07143269.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300951706|ref|ZP_07165526.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300958784|ref|ZP_07170896.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1]
 gi|301024862|ref|ZP_07188499.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|301648339|ref|ZP_07248079.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|300314532|gb|EFJ64316.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1]
 gi|300357972|gb|EFJ73842.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300396393|gb|EFJ79931.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300449068|gb|EFK12688.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300464254|gb|EFK27747.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|301073615|gb|EFK88421.1| conserved hypothetical protein [Escherichia coli MS 146-1]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|239979327|ref|ZP_04701851.1| methyltransferase small [Streptomyces albus J1074]
 gi|291451202|ref|ZP_06590592.1| predicted protein [Streptomyces albus J1074]
 gi|291354151|gb|EFE81053.1| predicted protein [Streptomyces albus J1074]
          Length = 229

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            L++G+GTG   +   +E        +D+S +A+E  + NA  +G  +R   L+SD FS+
Sbjct: 64  FLEIGSGTGVTAVVAAQEG-CASVTALDLSEEAVENTRRNAARHGAGDRVRVLRSDLFSA 122

Query: 161 V--EGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +  E  FD+I  N  + E     V+   L    FDP      G D  +H R + +  +R 
Sbjct: 123 LGPEERFDLIYWNSNFAEPPEGFVNETDLHHAFFDP------GYD--AHRRFLREAPAR- 173

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           LN  G   +       V+++R   +     +  F+  G
Sbjct: 174 LNPGGRVLLGFSSIGNVELLRALAAESGQKLTLFRSQG 211


>gi|218691387|ref|YP_002399599.1| putative methyltransferase small domain [Escherichia coli ED1a]
 gi|306816563|ref|ZP_07450695.1| putative methyltransferase small domain [Escherichia coli NC101]
 gi|331659376|ref|ZP_08360318.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA206]
 gi|331674628|ref|ZP_08375387.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA280]
 gi|218428951|emb|CAR09755.1| putative methyltransferase small domain [Escherichia coli ED1a]
 gi|281180137|dbj|BAI56467.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|305850128|gb|EFM50587.1| putative methyltransferase small domain [Escherichia coli NC101]
 gi|315297785|gb|EFU57059.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|323188470|gb|EFZ73755.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           RN587/1]
 gi|324008839|gb|EGB78058.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
 gi|331053958|gb|EGI25987.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA206]
 gi|331068067|gb|EGI39463.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA280]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|110643328|ref|YP_671058.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 536]
 gi|170684079|ref|YP_001745354.1| methyltransferase family protein [Escherichia coli SMS-3-5]
 gi|123147664|sp|Q0TD22|RLMG_ECOL5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564327|sp|B1LFI2|RLMG_ECOSM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|110344920|gb|ABG71157.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 536]
 gi|170521797|gb|ACB19975.1| methyltransferase family protein [Escherichia coli SMS-3-5]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|74313522|ref|YP_311941.1| hypothetical protein SSON_3121 [Shigella sonnei Ss046]
 gi|82545340|ref|YP_409287.1| enzyme [Shigella boydii Sb227]
 gi|194431730|ref|ZP_03064021.1| methyltransferase family protein [Shigella dysenteriae 1012]
 gi|260869835|ref|YP_003236237.1| putative methyltransferase small domain [Escherichia coli O111:H-
           str. 11128]
 gi|123558746|sp|Q31WU9|RLMG_SHIBS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|123616196|sp|Q3YXQ6|RLMG_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|73856999|gb|AAZ89706.1| putative enzyme [Shigella sonnei Ss046]
 gi|81246751|gb|ABB67459.1| putative enzyme [Shigella boydii Sb227]
 gi|194420086|gb|EDX36164.1| methyltransferase family protein [Shigella dysenteriae 1012]
 gi|257766191|dbj|BAI37686.1| predicted methyltransferase small domain [Escherichia coli O111:H-
           str. 11128]
 gi|320177708|gb|EFW52697.1| putative enzyme [Shigella boydii ATCC 9905]
 gi|320184634|gb|EFW59431.1| putative enzyme [Shigella flexneri CDC 796-83]
 gi|323165037|gb|EFZ50827.1| ribosomal RNA large subunit methyltransferase G [Shigella sonnei
           53G]
 gi|323173668|gb|EFZ59297.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           LT-68]
 gi|323178790|gb|EFZ64366.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1180]
 gi|332086559|gb|EGI91704.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii
           5216-82]
 gi|332086617|gb|EGI91759.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 155-74]
 gi|332086761|gb|EGI91899.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 155-74]
 gi|332092185|gb|EGI97263.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii
           3594-74]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|15803625|ref|NP_289658.1| putative enzyme [Escherichia coli O157:H7 EDL933]
 gi|12517671|gb|AAG58217.1|AE005538_4 putative enzyme [Escherichia coli O157:H7 str. EDL933]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|89109853|ref|AP_003633.1| predicted methyltransferase small domain [Escherichia coli str.
           K-12 substr. W3110]
 gi|90111535|ref|NP_417555.4| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli
           str. K-12 substr. MG1655]
 gi|170018665|ref|YP_001723619.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|170082626|ref|YP_001731946.1| methyltransferase small subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188495269|ref|ZP_03002539.1| methyltransferase family protein [Escherichia coli 53638]
 gi|194439803|ref|ZP_03071869.1| methyltransferase family protein [Escherichia coli 101-1]
 gi|218701855|ref|YP_002409484.1| putative methyltransferase small domain [Escherichia coli IAI39]
 gi|238902194|ref|YP_002927990.1| putative methyltransferase small domain protein [Escherichia coli
           BW2952]
 gi|253772081|ref|YP_003034912.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163030|ref|YP_003046138.1| putative methyltransferase small domain protein [Escherichia coli B
           str. REL606]
 gi|256024337|ref|ZP_05438202.1| predicted methyltransferase small domain protein [Escherichia sp.
           4_1_40B]
 gi|297518031|ref|ZP_06936417.1| predicted methyltransferase small domain protein [Escherichia coli
           OP50]
 gi|300931972|ref|ZP_07147269.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|300950699|ref|ZP_07164590.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300958475|ref|ZP_07170613.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|301025125|ref|ZP_07188718.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|301644786|ref|ZP_07244761.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|307139771|ref|ZP_07499127.1| predicted methyltransferase small domain protein [Escherichia coli
           H736]
 gi|9911104|sp|P42596|RLMG_ECOLI RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470493|sp|B1XG88|RLMG_ECODH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470496|sp|B1IRN3|RLMG_ECOLC RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|85675884|dbj|BAE77134.1| predicted methyltransferase small domain [Escherichia coli str. K12
           substr. W3110]
 gi|87082206|gb|AAC76119.2| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli
           str. K-12 substr. MG1655]
 gi|169753593|gb|ACA76292.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|169890461|gb|ACB04168.1| predicted methyltransferase small domain [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188490468|gb|EDU65571.1| methyltransferase family protein [Escherichia coli 53638]
 gi|194421251|gb|EDX37272.1| methyltransferase family protein [Escherichia coli 101-1]
 gi|218371841|emb|CAR19696.1| putative methyltransferase small domain [Escherichia coli IAI39]
 gi|238862672|gb|ACR64670.1| predicted methyltransferase small domain protein [Escherichia coli
           BW2952]
 gi|242378632|emb|CAQ33420.1| 23S rRNA m[2]G1835 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323125|gb|ACT27727.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974931|gb|ACT40602.1| predicted methyltransferase small domain protein [Escherichia coli
           B str. REL606]
 gi|253979087|gb|ACT44757.1| predicted methyltransferase small domain protein [Escherichia coli
           BL21(DE3)]
 gi|260447882|gb|ACX38304.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1]
 gi|299880177|gb|EFI88388.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|300314871|gb|EFJ64655.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|300449995|gb|EFK13615.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300460395|gb|EFK23888.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|301076940|gb|EFK91746.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|309703514|emb|CBJ02854.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli ETEC H10407]
 gi|315137676|dbj|BAJ44835.1| putative methyltransferase small domain protein [Escherichia coli
           DH1]
 gi|315617160|gb|EFU97769.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           3431]
 gi|323935916|gb|EGB32211.1| methyltransferase small domain-containing protein [Escherichia coli
           E1520]
 gi|323961047|gb|EGB56663.1| methyltransferase small domain-containing protein [Escherichia coli
           H489]
 gi|323970149|gb|EGB65422.1| methyltransferase small domain-containing protein [Escherichia coli
           TA007]
 gi|332345040|gb|AEE58374.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           UMNK88]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|325663767|ref|ZP_08152171.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331087287|ref|ZP_08336357.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470260|gb|EGC73493.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408973|gb|EGG88434.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 246

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 8/80 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----- 156
           LDLGTGTG + + L  ++      G++I  ++ ++A+ +   N + ++      D     
Sbjct: 50  LDLGTGTGIIPILLEAKTEGEHFTGLEIQKESADMAQRSVAHNHLEQKITIQTGDIKEAG 109

Query: 157 -WFSSVEGLFDVIVSNPPYI 175
             FS     FDVI +NPPY+
Sbjct: 110 TIFSPAS--FDVITTNPPYM 127


>gi|320645454|gb|EFX14463.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320650765|gb|EFX19222.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H- str. H 2687]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|301021894|ref|ZP_07185855.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
 gi|300397810|gb|EFJ81348.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|269962459|ref|ZP_06176808.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3]
 gi|269832755|gb|EEZ86865.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL+ ++ NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AGKVIGIDIDPQALQASRDNAERNGVADQLEVYLPQ--NQPEGLIADVVVAN 231


>gi|238064267|ref|ZP_04608976.1| methyltransferase type 12 [Micromonospora sp. ATCC 39149]
 gi|237886078|gb|EEP74906.1| methyltransferase type 12 [Micromonospora sp. ATCC 39149]
          Length = 328

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  I  R   RI+DLG G GA+ + LL E P   GV +D+S  A E A+       V +R
Sbjct: 144 LSEIINRKPRRIVDLGAGAGALLIRLLTELPTSTGVALDLSSGACEEAERAGRRAQVGDR 203

Query: 150 FDTLQSDWFSSVEGLFD 166
              +      SVE L D
Sbjct: 204 LTVVN----RSVETLVD 216


>gi|163843672|ref|YP_001628076.1| ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445]
 gi|189037692|sp|B0CHK5|PRMA_BRUSI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|163674395|gb|ABY38506.1| Ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445]
          Length = 285

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NGV+E   T
Sbjct: 142 VQTEHPTNALDLGTGSAVLAIAIARLAP-IPILATDIDPIAVTVAAENAAKNGVAEHIVT 200

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             ++ F          FD+IV+N
Sbjct: 201 ATAEGFGHPIFRSYSPFDLIVAN 223


>gi|90406831|ref|ZP_01215023.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
 gi|90312068|gb|EAS40161.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
          Length = 348

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD G G G +   LL +        +D++  AL  AK + + N +    +   SD FS
Sbjct: 210 NILDFGCGAGVIACYLLTKYSDLNVDLIDVNVYALASAKLSLLKNNLEG--EVFPSDVFS 267

Query: 160 SVEGLFDVIVSNPPY 174
            V   +D+++SNPP+
Sbjct: 268 DVNKKYDLLISNPPF 282


>gi|82778409|ref|YP_404758.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|331654686|ref|ZP_08355686.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M718]
 gi|81242557|gb|ABB63267.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|331048068|gb|EGI20145.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M718]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332


>gi|45655997|ref|YP_000083.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|51316692|sp|Q72W54|Y086_LEPIC RecName: Full=Uncharacterized RNA methyltransferase LIC_10086
 gi|45599230|gb|AAS68720.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 415

 Score = 40.8 bits (94), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDT--LQSD 156
           RIL+L  G+G + +AL  +S     +G +IS   ++ AK N + NG+S   F T  L++D
Sbjct: 271 RILELYCGSGLIAIAL--KSKTTSWLGYEISSDCVQQAKRNVLLNGISSCDFKTLNLETD 328

Query: 157 WFSSVEGLFDVI-VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W  S E L     + NPP         L  +V     + S +G +    ++ T+   +S 
Sbjct: 329 WIDSEEVLNSSFWIMNPPRA------GLSKKVLQTLIKTSPNGFLYSSCNHSTLVRDLSL 382

Query: 216 HLNKD 220
            LNKD
Sbjct: 383 FLNKD 387


>gi|327295731|ref|XP_003232560.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892]
 gi|326464871|gb|EGD90324.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892]
          Length = 370

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 36/177 (20%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSL 90
           RQR  L   + +    + +  ILG + F ++ +        PRP+TE      +    + 
Sbjct: 56  RQRLQLL--VRQRAAGKPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLAE 113

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN------ 140
            R+     VRI+D+ TGTG + L L        P    +GVDIS  AL +AK N      
Sbjct: 114 NRLNPTRSVRIIDVCTGTGCIPLLLHSLLASLIPTISIIGVDISAAALSLAKKNLEYNIR 173

Query: 141 --AVTNGVSERFDTLQSDWFS-----------------SVEGL---FDVIVSNPPYI 175
             A+ +   +    + +D                    S +GL    D+++SNPPYI
Sbjct: 174 NGALLSRARDEIHFVHADILDPCYLEPDGSELGKMLSRSNQGLSRGLDLLISNPPYI 230


>gi|319408182|emb|CBI81835.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella
           schoenbuchensis R1]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+G G G +C  + +       +G D S   +E+AK++A+ +G+S  +    ++  
Sbjct: 66  LRILDIGCGGGLLCEPMARLGATI--IGADASQTNIEVAKTHAIQSGLSIDYRATTAETL 123

Query: 159 SSVEGLFDVIVS 170
           +  E  FDVI++
Sbjct: 124 ADEEEQFDVILN 135


>gi|255514009|gb|EET90273.1| methyltransferase small [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 252

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 12/126 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  I +  +G G +  +LL      +   VDI+ +A+E+ +     NG+  + D   SD 
Sbjct: 45  VGTICEFCSGPGLIGFSLLANELCDRLCLVDINPEAIELCRYTIEQNGLEGKVDAFVSDG 104

Query: 158 FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +V    ++D+++SNPP+ +       G E    +  I++D    G   +R     V  
Sbjct: 105 LKNVPANQVWDLVISNPPHFD-------GSEKEYKNDLIAID---PGWRVHREFYADVGA 154

Query: 216 HLNKDG 221
           HLNK G
Sbjct: 155 HLNKGG 160


>gi|309785397|ref|ZP_07680028.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 1617]
 gi|229470428|sp|Q32BN8|RLMG_SHIDS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|308926517|gb|EFP71993.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 1617]
 gi|325499864|gb|EGC97723.1| Ribosomal RNA large subunit methyltransferase G [Escherichia
           fergusonii ECD227]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|218706708|ref|YP_002414227.1| putative methyltransferase small domain [Escherichia coli UMN026]
 gi|293406695|ref|ZP_06650621.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1412]
 gi|298382438|ref|ZP_06992035.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1302]
 gi|331664698|ref|ZP_08365603.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA143]
 gi|218433805|emb|CAR14722.1| putative methyltransferase small domain [Escherichia coli UMN026]
 gi|291426701|gb|EFE99733.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1412]
 gi|298277578|gb|EFI19094.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1302]
 gi|331057946|gb|EGI29928.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA143]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|182416667|ref|ZP_02948072.1| SAM-dependent methyltransferase [Clostridium butyricum 5521]
 gi|237666253|ref|ZP_04526240.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379482|gb|EDT76973.1| SAM-dependent methyltransferase [Clostridium butyricum 5521]
 gi|237658343|gb|EEP55896.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 250

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++ R   R +DL TGTG V   L  +    + VGV+I    +E+A+ + 
Sbjct: 36  IDAVLLSDFANVKTRH--RAIDLCTGTGIVPFLLYGKYSPQEVVGVEIQSDMVEMAERSV 93

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174
             N +  +   +  D    ++GL     FDV+  NPPY
Sbjct: 94  KLNSLESKVSFINLD-LKDIDGLKELGRFDVLTVNPPY 130


>gi|148273201|ref|YP_001222762.1| hypothetical protein CMM_2020 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831131|emb|CAN02083.1| unnamed protein product [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 208

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G V L L   SP      VD++ +AL + ++NA + G+      L  D  + 
Sbjct: 63  LLDVGCGWGPVALDLAMRSPAATVWAVDVNERALALTRANARSLGLENVNAVLPEDVPAD 122

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +E  F  + SNPP    V  + L   + D+ PR+S
Sbjct: 123 LE--FAAVWSNPPI--RVGKEALHGILLDWMPRLS 153


>gi|38704140|ref|NP_311993.2| hypothetical protein ECs3966 [Escherichia coli O157:H7 str. Sakai]
 gi|168749324|ref|ZP_02774346.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754059|ref|ZP_02779066.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762041|ref|ZP_02787048.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769496|ref|ZP_02794503.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773255|ref|ZP_02798262.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781222|ref|ZP_02806229.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785962|ref|ZP_02810969.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168797679|ref|ZP_02822686.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195937230|ref|ZP_03082612.1| hypothetical protein EscherichcoliO157_12376 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809571|ref|ZP_03251908.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208814358|ref|ZP_03255687.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819645|ref|ZP_03259965.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399561|ref|YP_002272557.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217326995|ref|ZP_03443078.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795035|ref|YP_003079872.1| putative methyltransferase small domain-containing protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|261228096|ref|ZP_05942377.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254952|ref|ZP_05947485.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|229470492|sp|B5YRC4|RLMG_ECO5E RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470503|sp|Q8XAK8|RLMG_ECO57 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|187770938|gb|EDU34782.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016428|gb|EDU54550.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189000973|gb|EDU69959.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358404|gb|EDU76823.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361441|gb|EDU79860.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367603|gb|EDU86019.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374118|gb|EDU92534.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379623|gb|EDU98039.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208729372|gb|EDZ78973.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735635|gb|EDZ84322.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739768|gb|EDZ87450.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160961|gb|ACI38394.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319362|gb|EEC27787.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594435|gb|ACT73796.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|320189436|gb|EFW64095.1| putative enzyme [Escherichia coli O157:H7 str. EC1212]
 gi|320640157|gb|EFX09729.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320666985|gb|EFX33961.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326337788|gb|EGD61622.1| putative enzyme [Escherichia coli O157:H7 str. 1125]
 gi|326347353|gb|EGD71078.1| putative enzyme [Escherichia coli O157:H7 str. 1044]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|81299140|ref|YP_399348.1| hypothetical protein Synpcc7942_0329 [Synechococcus elongatus PCC
           7942]
 gi|81168021|gb|ABB56361.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 414

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 6/144 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           DS L  R RF    A+  S+       +    D Y        D   P         SA 
Sbjct: 2   DSTLLGRSRFSFFAAMPDSVTQA----VSALYDAYPFPPEPMQDGPPPGYNWRWHYPSAY 57

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF   R  +    RILD G GTG     L   +P  +   +DIS   L +A+     +GV
Sbjct: 58  AFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRSGV 117

Query: 147 SERFDTLQSDWF--SSVEGLFDVI 168
           ++R    Q   +  + + G FD I
Sbjct: 118 ADRIHFQQLSLYDVAQLPGEFDQI 141


>gi|254038254|ref|ZP_04872312.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|331643782|ref|ZP_08344913.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H736]
 gi|606022|gb|AAA57885.1| ORF_f388 [Escherichia coli str. K-12 substr. MG1655]
 gi|226839878|gb|EEH71899.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|331037253|gb|EGI09477.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H736]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332


>gi|13363439|dbj|BAB37389.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
 gi|209759090|gb|ACI77857.1| putative enzyme [Escherichia coli]
 gi|209759092|gb|ACI77858.1| putative enzyme [Escherichia coli]
 gi|209759096|gb|ACI77860.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332


>gi|67464821|ref|XP_648602.1| dimethyladenosine transferase [Entamoeba histolytica HM-1:IMSS]
 gi|56464806|gb|EAL43214.1| dimethyladenosine transferase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCK-ALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L++G GTG + + +L   PF K  + ++I  + A E+ K  +VT+ V ++ + +Q D+ 
Sbjct: 42  VLEIGPGTGNLTMKML---PFCKKLIAIEIDPRMAAELKKRVSVTDYV-KKLEIIQGDFL 97

Query: 159 SSVEGLFDVIVSNPPY 174
                 FDV VSN PY
Sbjct: 98  KVELPYFDVCVSNTPY 113


>gi|295132390|ref|YP_003583066.1| hypothetical protein ZPR_0512 [Zunongwangia profunda SM-A87]
 gi|294980405|gb|ADF50870.1| protein containing methyltransferase small domain [Zunongwangia
           profunda SM-A87]
          Length = 240

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 14/155 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   ILD+GTGTG + L + + S       ++I   A E A  N   +   +R     +
Sbjct: 37  EDTDSILDVGTGTGVIALMMAQRSSAQLIDAIEIDENAYEQAVENFEHSDWGDRLFCYHA 96

Query: 156 DWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           ++   VE +     +D+I+SNPP+  S        E RD   R       D L  ++ + 
Sbjct: 97  EFGEFVEEMQDEEKYDLIISNPPFYNSDYK--TASEARDM-ARFQ-----DALP-FQLLL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +G +  L++ G  +V I  +Q+ D + +     LF
Sbjct: 148 EGATYLLSEKGRLAVIIPKSQEQDFLELAGDFNLF 182


>gi|119196521|ref|XP_001248864.1| hypothetical protein CIMG_02635 [Coccidioides immitis RS]
          Length = 391

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 86/231 (37%), Gaps = 62/231 (26%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNV 63
           RD  S    +  L  H   +   +  DD  R     ++VR   +   +  ILG + F  +
Sbjct: 27  RDLDSARNELRWLREHVHSLSKANACDDAWRQRQLKSMVRDRARGMPLQYILGDQPFGEL 86

Query: 64  RLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            +        PRPETE         +L +  +  S P       +RILDL TGTG + L 
Sbjct: 87  DILCRKGVLIPRPETESYTFRTARLILSELQMGSSSP-----APIRILDLCTGTGCIPLL 141

Query: 115 LLKES----PFFKGVGVDISCKALEIAKSNAVTN-------------------------- 144
           L        P    VG+DIS KAL +A+ N   N                          
Sbjct: 142 LHSLLASSIPDLALVGIDISRKALSLARKNLEYNISQNHLLPRARQDISFLQANVLRDEK 201

Query: 145 --GVSERFDTLQS------DWFSSVE---------GLFDVIVSNPPYIESV 178
              V    D + S      D+ S+ +         G +DV++SNPPYI  V
Sbjct: 202 AELVKREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPYISPV 252


>gi|16272371|ref|NP_438584.1| hypothetical protein HI0423 [Haemophilus influenzae Rd KW20]
 gi|260580514|ref|ZP_05848342.1| O-methyltransferase [Haemophilus influenzae RdAW]
 gi|1573395|gb|AAC22079.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092856|gb|EEW76791.1| O-methyltransferase [Haemophilus influenzae RdAW]
          Length = 240

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G GTG + L L + +     +  V++   A + A+ N   +    R    Q D   
Sbjct: 47  ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQVDIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 107 FLQTTEQTFDLIVANPPYFEQGIA 130


>gi|291284462|ref|YP_003501280.1| hypothetical protein G2583_3808 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764335|gb|ADD58296.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615]
 gi|320656144|gb|EFX24056.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661834|gb|EFX29242.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|260219477|emb|CBA26322.1| hypothetical protein Csp_E34100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 423

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 8/101 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRIL-----DLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           VD   A  LP    +DV   L     D+GTG+G V  A+L        V  D   +A+  
Sbjct: 219 VDLVAAAPLPAQSGKDVRDALPFVAFDIGTGSG-VLSAVLARRQDMHIVATDQDARAMAC 277

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           A  N    GV+   D  Q+D F +  G  +++V NPP++ +
Sbjct: 278 ATENFARLGVTAGIDLQQTDMFPA--GRANLVVCNPPWLPA 316


>gi|242398949|ref|YP_002994373.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
           sibiricus MM 739]
 gi|242265342|gb|ACS90024.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
           sibiricus MM 739]
          Length = 249

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           KR+V +ILDL  GTG   L L K    ++ VG+D+  + LE+AK  A   G++  F  +Q
Sbjct: 39  KREVKKILDLACGTGIPTLELAKRG--YEVVGMDLHEEMLEVAKRKAKREGLTIEF--IQ 94

Query: 155 SD 156
            D
Sbjct: 95  GD 96


>gi|209759088|gb|ACI77856.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332


>gi|154686805|ref|YP_001421966.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           FZB42]
 gi|166223394|sp|A7Z6V9|PRMA_BACA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|154352656|gb|ABS74735.1| YqeT [Bacillus amyloliquefaciens FZB42]
          Length = 311

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93
            W+ +Y+         +  + +T+ P    EL++  D  +AF             +L RI
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172

Query: 94  -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +K D  R++D+GTG+G  ++  A+L+          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--RVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNVKLNKVSDTA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
           +  Q++    + G  DVIV+N
Sbjct: 228 EVKQNNLLDGITGEHDVIVAN 248


>gi|30698221|ref|NP_201437.2| ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana]
 gi|21539437|gb|AAM53271.1| dimethyladenosine transferase-like protein [Arabidopsis thaliana]
 gi|31711838|gb|AAP68275.1| At5g66360 [Arabidopsis thaliana]
 gi|332010820|gb|AED98203.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
           thaliana]
          Length = 352

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL+ +     V V++  + +EI +     +G +++   +Q D   +
Sbjct: 93  VLEIGPGTGNLTMKLLEAAQNV--VAVELDKRMVEILRKRVSDHGFADKLTIIQKDVLKT 150

Query: 161 VEGLFDVIVSNPPY 174
               FD++V+N PY
Sbjct: 151 DFPHFDLVVANIPY 164


>gi|193064025|ref|ZP_03045110.1| putative methyltransferase [Escherichia coli E22]
 gi|194429278|ref|ZP_03061805.1| putative methyltransferase [Escherichia coli B171]
 gi|209920054|ref|YP_002294138.1| hypothetical protein ECSE_2863 [Escherichia coli SE11]
 gi|218555157|ref|YP_002388070.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|256017275|ref|ZP_05431140.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|260845260|ref|YP_003223038.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|260856669|ref|YP_003230560.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|260869262|ref|YP_003235664.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|307313854|ref|ZP_07593470.1| methyltransferase small [Escherichia coli W]
 gi|331669326|ref|ZP_08370174.1| hypothetical protein ECLG_01088 [Escherichia coli TA271]
 gi|262828119|sp|B7M8I9|TRMN6_ECO8A RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828233|sp|B6I5E9|TRMN6_ECOSE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831209|sp|Q0T1T1|TRMN6_SHIF8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831223|sp|Q83QI2|TRMN6_SHIFL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|192929260|gb|EDV82869.1| putative methyltransferase [Escherichia coli E22]
 gi|194412686|gb|EDX28981.1| putative methyltransferase [Escherichia coli B171]
 gi|209913313|dbj|BAG78387.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218361925|emb|CAQ99525.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|257755318|dbj|BAI26820.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|257760407|dbj|BAI31904.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|257765618|dbj|BAI37113.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|306906355|gb|EFN36870.1| methyltransferase small [Escherichia coli W]
 gi|313648254|gb|EFS12698.1| methyltransferase small domain protein [Shigella flexneri 2a str.
           2457T]
 gi|315061894|gb|ADT76221.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli W]
 gi|323156233|gb|EFZ42392.1| methyltransferase small domain protein [Escherichia coli EPECa14]
 gi|323159232|gb|EFZ45222.1| methyltransferase small domain protein [Escherichia coli E128010]
 gi|323177295|gb|EFZ62883.1| methyltransferase small domain protein [Escherichia coli 1180]
 gi|323184545|gb|EFZ69919.1| methyltransferase small domain protein [Escherichia coli 1357]
 gi|323377525|gb|ADX49793.1| methyltransferase small [Escherichia coli KO11]
 gi|331064520|gb|EGI36431.1| hypothetical protein ECLG_01088 [Escherichia coli TA271]
 gi|332753985|gb|EGJ84359.1| methyltransferase small domain protein [Shigella flexneri 4343-70]
 gi|332755824|gb|EGJ86182.1| methyltransferase small domain protein [Shigella flexneri 2747-71]
 gi|332761969|gb|EGJ92242.1| methyltransferase small domain protein [Shigella flexneri K-671]
 gi|332766577|gb|EGJ96782.1| S-adenosyl-L-methionine-dependent methyltransferase [Shigella
           flexneri 2930-71]
 gi|333000435|gb|EGK20017.1| methyltransferase small domain protein [Shigella flexneri VA-6]
 gi|333000850|gb|EGK20422.1| methyltransferase small domain protein [Shigella flexneri K-218]
 gi|333001668|gb|EGK21235.1| methyltransferase small domain protein [Shigella flexneri K-272]
 gi|333015944|gb|EGK35279.1| methyltransferase small domain protein [Shigella flexneri K-227]
 gi|333016822|gb|EGK36148.1| methyltransferase small domain protein [Shigella flexneri K-304]
          Length = 245

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|325295579|ref|YP_004282093.1| hypothetical protein Dester_1403 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066027|gb|ADY74034.1| protein of unknown function Met10 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 399

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 16/85 (18%)

Query: 100 RILDL-----GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R+LD      G G  A  +   KE      V VD S  AL++AK NA  NGV+++F  ++
Sbjct: 222 RVLDAFCHLGGFGIHAAVIGKAKEV-----VAVDSSQLALDLAKENAKLNGVADKFQFVK 276

Query: 155 SDWFSSVEGL------FDVIVSNPP 173
            D F  ++ +      FD IV +PP
Sbjct: 277 GDAFKVLKRMQQEGEKFDSIVIDPP 301


>gi|324112071|gb|EGC06049.1| methyltransferase small domain-containing protein [Escherichia
           fergusonii B253]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|300974120|ref|ZP_07172470.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300982279|ref|ZP_07175990.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|301047214|ref|ZP_07194306.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300300891|gb|EFJ57276.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300308943|gb|EFJ63463.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300408833|gb|EFJ92371.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|315287991|gb|EFU47393.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|315294532|gb|EFU53880.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|315300544|gb|EFU59773.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|324014380|gb|EGB83599.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  ILQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|290956813|ref|YP_003487995.1| methyltransferase [Streptomyces scabiei 87.22]
 gi|260646339|emb|CBG69434.1| putative methyltransferase [Streptomyces scabiei 87.22]
          Length = 496

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +++    R+LDLG G G +  ALLK+  + + VG D+S +AL IA      + + ER
Sbjct: 298 LQESGAARVLDLGCGQGQLVQALLKDVRYTEIVGTDVSMRALTIAARRLKLDRMGER 354


>gi|242814941|ref|XP_002486472.1| arsenite methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218714811|gb|EED14234.1| arsenite methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 303

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +S  AF LP IEK D  RILD+G G G++     K +     VGVDIS + L+
Sbjct: 27  AESHAAFLLPHIEKGD--RILDVGCGPGSITTGFAKYASEGSIVGVDISAEVLQ 78


>gi|215488413|ref|YP_002330844.1| predicted methyltransferase small domain [Escherichia coli O127:H6
           str. E2348/69]
 gi|215266485|emb|CAS10924.1| predicted methyltransferase small domain [Escherichia coli O127:H6
           str. E2348/69]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPESLDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|126733998|ref|ZP_01749745.1| methyltransferase small [Roseobacter sp. CCS2]
 gi|126716864|gb|EBA13728.1| methyltransferase small [Roseobacter sp. CCS2]
          Length = 251

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 10/110 (9%)

Query: 72  FEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           ++PR      VD   LA S+P    + V   L+LG G G   L L    P     GV++ 
Sbjct: 18  WQPRRGYRAGVDPVILAASVPAKSGQTV---LELGCGVGVASLCLAARVPGLHVTGVEVQ 74

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
                +A+ N V N +   F+ + +D  S   GL    FD ++ NPPY +
Sbjct: 75  DVYSTLAQRNGVANDLP--FEVITADLRSLPAGLRQKRFDHVIMNPPYFD 122


>gi|20092700|ref|NP_618775.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
 gi|19917988|gb|AAM07255.1| ubiE/COQ5 methyltransferase [Methanosarcina acetivorans C2A]
          Length = 251

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 8/115 (6%)

Query: 58  RDFYNVRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           RDF+N R    S TF+  P   T    +      L R +  D  +ILD+G+GTG + L L
Sbjct: 9   RDFWNYR----SQTFDKSPGHYTASKEEEEAWKGLLRSKLDDAEKILDIGSGTGFLSLML 64

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                 ++ VG+D+S + +  A + A   G+S  F    ++        FD IV+
Sbjct: 65  ADMG--YEVVGIDLSEEMIARASAKAKERGLSIDFHQDDAEQLGFENNSFDAIVN 117


>gi|60681874|ref|YP_212018.1| hypothetical protein BF2394 [Bacteroides fragilis NCTC 9343]
 gi|81315061|sp|Q5LCS1|TRMN6_BACFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|60493308|emb|CAH08092.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 237

 Score = 40.8 bits (94), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            RILD+GTGTG V L +L +      + ++I   A + A  N   +    R + +  D+ 
Sbjct: 39  ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGTAAQQAAENITRSPWGSRIEVVCQDFR 97

Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +S+      +D IVSNPPY      D L       D + +     D LS Y  +  GVS
Sbjct: 98  LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             L+ +G  +V I  +       I  S+ L+
Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|325694149|gb|EGD36067.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK150]
          Length = 182

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALEILTGAFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|312968571|ref|ZP_07782780.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           2362-75]
 gi|312286789|gb|EFR14700.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           2362-75]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPESLDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|300916708|ref|ZP_07133424.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300416003|gb|EFJ99313.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
          Length = 409

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 263 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 322

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 323 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 353


>gi|209759094|gb|ACI77859.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 242 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 301

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 302 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 332


>gi|24212798|ref|NP_710279.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar
           Lai str. 56601]
 gi|50401585|sp|Q8F9U1|Y098_LEPIN RecName: Full=Uncharacterized RNA methyltransferase LA_0098
 gi|24193445|gb|AAN47297.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 415

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 12/125 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDT--LQSD 156
           RIL+L  G+G + +AL  +S     +G +IS   ++ AK N + NG+S   F T  L++D
Sbjct: 271 RILELYCGSGLIAIAL--KSKTTSWLGYEISSDCVQQAKRNVLLNGISSCDFKTLNLETD 328

Query: 157 WFSSVEGLFDVI-VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           W  S E L     + NPP         L  +V     + S +G +    ++ T+   +S 
Sbjct: 329 WIDSEEVLNSSFWIMNPPRA------GLSKKVLQTLIKTSPNGFLYSSCNHTTLVRDLSL 382

Query: 216 HLNKD 220
            LNKD
Sbjct: 383 FLNKD 387


>gi|261825063|pdb|3JWH|A Chain A, Crystal Structure Analysis Of The Methyltransferase Domain
           Of Bacterial-Avhen1-C
 gi|261825064|pdb|3JWH|B Chain B, Crystal Structure Analysis Of The Methyltransferase Domain
           Of Bacterial-Avhen1-C
          Length = 217

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 7/70 (10%)

Query: 77  ETELLVDSALAFSLPRI-------EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E E  V+  ++ +  R+       ++ +  R++DLG G G +   LLK+S F +  GVD+
Sbjct: 2   EEEAAVEKPISLNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDV 61

Query: 130 SCKALEIAKS 139
           S ++LEIA+ 
Sbjct: 62  SYRSLEIAQE 71


>gi|229470425|sp|Q0T0I4|RLMG_SHIF8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|332753146|gb|EGJ83530.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           4343-70]
 gi|333000107|gb|EGK19690.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-218]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEVRDFDPR 193
           S VE   F+ ++ NPP+ +   + D +  E+  +  R
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHYARR 328


>gi|156848589|ref|XP_001647176.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117860|gb|EDO19318.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 220

 Score = 40.4 bits (93), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKES-PFFKG---VG 126
           +EP  ++ LL+D+        +EK   +V + + G G+G V   +++   P       + 
Sbjct: 15  YEPSEDSFLLLDALEKEQGYLVEKFNGLVLVCEFGPGSGIVTTFMIQNRIPVGLNSVYLA 74

Query: 127 VDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           VD+S  A    LE AK N    G     DT+Q +  + + +   DV++ NPPY+ +  V 
Sbjct: 75  VDVSPWAVEATLETAKLNNCDKGTV--LDTVQGNLGTGLRKNQVDVLLFNPPYVPAEEVP 132

Query: 182 CLGLEVRDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     D+    ++LDGG DG+   + + D +   L+K+G+  +
Sbjct: 133 EVPESKDDYKWLDLALDGGEDGMVVTQKVLDNLDSILSKNGVAYI 177


>gi|332998693|gb|EGK18289.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           VA-6]
 gi|332999849|gb|EGK19433.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-272]
 gi|333015719|gb|EGK35058.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-227]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRSEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQQHALTDNVAWEM 322


>gi|281201671|gb|EFA75879.1| hypothetical protein PPL_10451 [Polysphondylium pallidum PN500]
          Length = 324

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 25/202 (12%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L +E     LG +D+ NV        +EP  ++ L +D AL   +  ++    +  +++G
Sbjct: 114 LPNEPNMSHLGSKDYQNV--------YEPAQDSFLFID-ALKKDVEYLKGLRPLVAVEIG 164

Query: 106 TGTGAVCL---ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +G+G V      LL    +F  +  DI+  A   +   A  N V  R D + + + S ++
Sbjct: 165 SGSGFVISYLSMLLNNDGYF--LSTDINPIAAMTSTRTATHNNV--RLDVVNTSFLSGID 220

Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
              G  DV++ NPPY+ +        E+       S  GGIDG      +   +S  L++
Sbjct: 221 RLLGNVDVLLFNPPYVPTP-----SEEIEQGGIAASWAGGIDGREVIDKLLPQISNILSE 275

Query: 220 DG-LCSVEIGYNQKVDVVRIFE 240
            G    V +  N+  +VV I +
Sbjct: 276 KGCFYIVLVEENKPAEVVAIMK 297


>gi|320200139|gb|EFW74728.1| putative methyltransferase [Escherichia coli EC4100B]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|308171997|ref|YP_003918702.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|307604861|emb|CBI41232.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|328551807|gb|AEB22299.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens TA208]
 gi|328910068|gb|AEB61664.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens LL3]
          Length = 201

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 7/89 (7%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF  P I+       LD G G G + L+L  E        +D++ +A+E++  NA  NG+
Sbjct: 52  AFEEPEIDGD----FLDAGCGYGPIGLSLAGEFTDRTVHMIDVNERAVELSNENAEKNGI 107

Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173
            +     QSD FS+++    F  I++NPP
Sbjct: 108 -KNVRIYQSDLFSNIDSAQTFASIITNPP 135


>gi|284991436|ref|YP_003409990.1| methylase of polypeptide chain release factors-like protein
           [Geodermatophilus obscurus DSM 43160]
 gi|284064681|gb|ADB75619.1| Methylase of polypeptide chain release factors-like protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 238

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           +++LGTG       ++   P  +    DIS  ++E A+ N    GV++R+     D+F  
Sbjct: 35  VVELGTGDATAIADVVAGLPELRVRSFDISAPSVERARENIAARGVADRYTVEFGDFFDR 94

Query: 159 --SSVEGLFDVIVSNPPYIES 177
             S+       +++NPPYI +
Sbjct: 95  ADSAAGPSASTVIANPPYIPA 115


>gi|186686438|ref|YP_001869634.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186468890|gb|ACC84691.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 35  RFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           RF   + I+ S    ++ H I G    YN  ++    T    P  E +V  AL  ++ ++
Sbjct: 41  RFRRDDVIIPSYYSSQNFHGITGGYLTYNAAVSYDPITQYVVPPNETIVRQALIDAV-KV 99

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   RILDLG GTG+  L L +  P  + +G+D+S   L  A+  A  +G+   +   
Sbjct: 100 KPR---RILDLGCGTGSTTLMLKRAFPEAEVIGLDLSPYMLVRAEDKARNSGLEIVWRHG 156

Query: 154 QSDWFSSVEGLFDVIVSN 171
            ++  S  +  FD++ ++
Sbjct: 157 NAEKTSFRDATFDLVTAS 174


>gi|332304898|ref|YP_004432749.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172227|gb|AEE21481.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 383

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 21/115 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA--------------VTNG 145
           RI+DLG G G + L +L +SP      VD S  A+  AK N               V+N 
Sbjct: 235 RIIDLGCGNGVLGLHVLHQSPDAHVTFVDESFMAIASAKMNIEQNMPDKLKQCEFLVSNC 294

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199
           + E   T  +D  +SV    D+++ NPP+  ++ I D + L++     RI   GG
Sbjct: 295 LDEYLRTPAND--ASV----DIVLCNPPFHQQNTITDHIALQMFKDSKRILKHGG 343


>gi|320353479|ref|YP_004194818.1| methyltransferase small [Desulfobulbus propionicus DSM 2032]
 gi|320121981|gb|ADW17527.1| methyltransferase small [Desulfobulbus propionicus DSM 2032]
          Length = 261

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 82  VDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           VD+ LA  F+ PR  +R    +LDLG G G + L L         V +++  +   + + 
Sbjct: 40  VDAVLAAHFAAPRAGER----LLDLGCGCGVIGLILAHRHAHIAVVSLELQEELAALTEE 95

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
           N+  NG  +R   ++ D  +  E L     D +V NPPY
Sbjct: 96  NSRLNGFGDRLRVVRGDVRTVGEVLPPESVDWVVCNPPY 134


>gi|300864318|ref|ZP_07109195.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300337683|emb|CBN54341.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 334

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDW 157
           +ILD GTGT  + + + +  P ++ +G+D+S   L++ + N    G+    + + + +  
Sbjct: 160 KILDAGTGTARIPIIMRQMRPQWQVIGIDLSANMLKVGQENVEKAGMRSQIQLELIDAKK 219

Query: 158 FSSVEGLFDVIVSN 171
               +  FD++VSN
Sbjct: 220 MPYPDNHFDLVVSN 233


>gi|293374642|ref|ZP_06620957.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325845438|ref|ZP_08168731.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
 gi|292646732|gb|EFF64727.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325488544|gb|EGC90960.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
          Length = 254

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 6/99 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P I K  V  I+DL TG   V L L   S      GV+I   + ++A  N 
Sbjct: 33  LDSTLLGDYPTINK-GVKSIVDLCTGNAPVPLFLSLRSKAHI-TGVEIQDMSYDLATRNV 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             NG+ +R   ++ D     E L     DV+  NPPY +
Sbjct: 91  AVNGLEDRITIVKGDLKGIHEQLGKYAHDVVTCNPPYFK 129


>gi|291562843|emb|CBL41659.1| Predicted O-methyltransferase [butyrate-producing bacterium SS3/4]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + L L  ++       ++I  +   +A+ +   N + E+ + +  D   
Sbjct: 48  RVLDLGTGTGIIPLLLSAKTEGEHFSALEIQDEIARMAERSIKLNHLEEKIEIVHGDIKE 107

Query: 160 SVE----GLFDVIVSNPPYI 175
           +        FDV+ +NPPY+
Sbjct: 108 ASRIFGAASFDVVTTNPPYM 127


>gi|260772190|ref|ZP_05881106.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14]
 gi|260611329|gb|EEX36532.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQS---D 156
           I+DLG G G + + L + +P  K + VD S  A+E AK N   N  S+ RF+ L +   D
Sbjct: 234 IIDLGCGNGVLSVKLGQLNPQAKIISVDESFMAVESAKRNLEKNLSSQHRFECLTNNCLD 293

Query: 157 WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEV 187
            F     +F  IV NPP+  +  I D +  ++
Sbjct: 294 GFPDHSTMF--IVCNPPFHQQQAITDHIAWQM 323


>gi|254303806|ref|ZP_04971164.1| possible O-methyltransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323998|gb|EDK89248.1| possible O-methyltransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 243

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 12/117 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F         +DS L      I K++  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFN------FSIDSLLISEFVSI-KKNTKKILDLGTGNAAIPLFLSKKTS- 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFDVIVSNPPY 174
            K  G++I   +  +A  N   N ++E+    +D +++       G FD ++SNPP+
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKHFNIGSFDTVISNPPF 123


>gi|170735747|ref|YP_001777007.1| methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
 gi|169817935|gb|ACA92517.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 99  VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A   GV  RF
Sbjct: 50  TRVLDVGCGTGAVTLAVARRLGASAQCTGIDISARMIDAARARAERGGVPARF 102


>gi|300937979|ref|ZP_07152761.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300457020|gb|EFK20513.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
            I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ ++ NPP+
Sbjct: 291 LSGVEPFRFNAVLCNPPF 308


>gi|262527564|sp|P44702|TRMN6_HAEIN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 232

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G GTG + L L + +     +  V++   A + A+ N   +    R    Q D   
Sbjct: 39  ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRIQLTQVDIQH 98

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  + E  FD+IV+NPPY E  I 
Sbjct: 99  FLQTTEQTFDLIVANPPYFEQGIA 122


>gi|257463625|ref|ZP_05628016.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           D12]
          Length = 221

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           L++GTG G + + LL +  F       VDI    +++AK NA  NGVS RF       FS
Sbjct: 46  LEIGTGNGILPI-LLSQRGFVSKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFS 104

Query: 160 SVEGLFDVIVSNPPYIE 176
             +  +  I +NPPY++
Sbjct: 105 E-KNAYTQIFANPPYMK 120


>gi|240103955|ref|YP_002960264.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
 gi|239911509|gb|ACS34400.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
          Length = 421

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 8/140 (5%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR-IE 94
           ++  N     + +  I R  G ++F  ++  L    +   P +    +S  A  L R + 
Sbjct: 218 YWSVNRTPSDVSYGEIERFWG-KEF--IKEELDGTVYLIHPNSFFQTNSYGAVELLREVA 274

Query: 95  KR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           KR +  R+LDL +G G   + L ++   F   G++I+  A+E+A  NA  NGV  RF   
Sbjct: 275 KRAEGGRVLDLYSGVGTFGVYLARKG--FSVEGIEINPFAVEMANRNAEINGVEARFRVG 332

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
                 S++  +D ++ +PP
Sbjct: 333 ADKDVGSLQA-YDTVIVDPP 351


>gi|229173546|ref|ZP_04301089.1| Methyltransferase type 11 [Bacillus cereus MM3]
 gi|228609928|gb|EEK67207.1| Methyltransferase type 11 [Bacillus cereus MM3]
          Length = 261

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK+  ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKNFIISN 86

Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169
           G     F    ++     +G FD I 
Sbjct: 87  GYENVSFVAGNAESLPFADGFFDTIT 112


>gi|225619640|ref|YP_002720897.1| adenine/cytosine DNA methyltransferase [Brachyspira hyodysenteriae
           WA1]
 gi|225214459|gb|ACN83193.1| adenine/cytosine DNA methyltransferase [Brachyspira hyodysenteriae
           WA1]
          Length = 812

 Score = 40.4 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 11/113 (9%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK----SNAVTNG 145
           LP    +DV+RIL+   G G+    L+K+   ++G  ++I C  ++I       N   N 
Sbjct: 441 LPEFSNKDVIRILEPSCGIGSFLPQLIKK---YQGKKLEIDCIDIDIENISIAKNIFFND 497

Query: 146 VSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            +  F+ + +D+    ++  +D++V NPP+  ++I D   L  R++  R SL+
Sbjct: 498 NNITFNFINADFLLCDLDKKYDIVVGNPPF-GNIIKDKKLL--REYKKRSSLN 547


>gi|206901995|ref|YP_002249964.1| methyltransferase [Dictyoglomus thermophilum H-6-12]
 gi|206741098|gb|ACI20156.1| methyltransferase [Dictyoglomus thermophilum H-6-12]
          Length = 395

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+   TG   L  LK     K + VD S  ALE+AK NA  NG  ++ + ++ +
Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGAS-KVIAVDSSSTALEMAKENAKINGFIDKIEFIEEN 275

Query: 157 WFSSV-----EG-LFDVIVSNPP 173
            F  +     EG  FDV++ +PP
Sbjct: 276 AFDLLRRFHKEGKTFDVVILDPP 298


>gi|51891645|ref|YP_074336.1| ribosomal protein L11 methyltransferase [Symbiobacterium
           thermophilum IAM 14863]
 gi|60390360|sp|Q67S51|PRMA_SYMTH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|51855334|dbj|BAD39492.1| ribosomal protein L11 methyltransferase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 304

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
           R++D+GTG+G + +A  K     + V +D+   A++ A+ NA  NGV    R  TL    
Sbjct: 172 RVIDVGTGSGILAVA-AKHLGAAEVVAIDVDPVAVDAARENAGRNGVEIDVRLATLD--- 227

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCL 183
               EG  D+IV+N   I SVIVD L
Sbjct: 228 -QVAEGEADLIVAN--IIASVIVDIL 250


>gi|325685704|gb|EGD27783.1| methyltransferase domain protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 200

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90
           +++F  N  V   +H   +R+ G     N+ LT  +  F        + LL++  L   L
Sbjct: 3   EQYFTENPTVDHDEHHVNYRLNG----INLNLTTDAGVFSKNRVDYGSGLLIEQMLDQEL 58

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P         ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  N  +   
Sbjct: 59  PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111

Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173
           +   SD +  V G + +IV+NPP
Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134


>gi|255647950|gb|ACU24432.1| unknown [Glycine max]
          Length = 234

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 32/209 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFKG 124
            + +EP  ++  LVD+ LA     +E    +  +++G G+G V     L L +E      
Sbjct: 20  QEVYEPCDDSFALVDALLADRNNLLEHHPTL-CMEIGCGSGYVITSLALILGQEVCGINY 78

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV 180
           +  DI+  A+ +       +GV      + +D  S +E    GL DV+V NPPY+ +   
Sbjct: 79  IATDINPHAVRVTHETLEAHGVGAEL--IVTDIASGLEDRLAGLVDVMVVNPPYVPTP-E 135

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--------------LCSV- 225
           D +G+E        S  GG +G S    I     R L++ G              +C   
Sbjct: 136 DEVGVE----GITSSWAGGENGRSVINKILPVADRLLSEKGWLYMVTLTENNPFEICHQM 191

Query: 226 -EIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            + GY  K+ V R  E   L ++  ++D+
Sbjct: 192 RKKGYASKIVVQRSTEEESLHIIKFWRDF 220


>gi|168984589|emb|CAQ12137.1| HemK methyltransferase family member 1 [Mus musculus]
          Length = 121

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 9/102 (8%)

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADGVSRHLNKDG 221
            D++VSNPPYI    ++ L  E+  ++  ++LDGG +G+   +H  T+A  +   LN  G
Sbjct: 16  LDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLAPQL---LNASG 72

Query: 222 LCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVL 260
              +E+       V    +S     L LV   +D+ G  R L
Sbjct: 73  SIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFL 114


>gi|55377169|ref|YP_135019.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049]
 gi|55229894|gb|AAV45313.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049]
          Length = 208

 Score = 40.4 bits (93), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 15/106 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++P  +++LL  +A      R+E  D V  LD+GTG+G V   L       + VGVD+S 
Sbjct: 32  YQPAEDSDLLARTARE----RVEAGDTV--LDVGTGSGYVAATLADAG--ARAVGVDVSP 83

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            A   A  N V     +  +  ++D        FD++  NPPY+ +
Sbjct: 84  LACREAAENGVPVVRGDLVEPFRAD-------AFDLVAFNPPYLPT 122


>gi|315172562|gb|EFU16579.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX1346]
          Length = 537

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 219 ETRAPFHIYDPAMGSGSLMLNIRRYLTNPDQVHYHGQELNTTTFNLARMNLILHGVDKER 278

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308


>gi|312872218|ref|ZP_07732291.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092302|gb|EFQ50673.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2062A-h1]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|307946011|ref|ZP_07661346.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp.
           TrichSKD4]
 gi|307769675|gb|EFO28901.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp.
           TrichSKD4]
          Length = 351

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R  DLG G G +   LL+++P    + + +   +AL++A+ N  ++        + SD  
Sbjct: 202 RGADLGAGFGVLSRHLLEKAPKVTALDLYEAEKRALDLAQENLASDRDKVTLTGIWSDVT 261

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
             +EG +D IV NPP+ ++   D
Sbjct: 262 KGIEGPYDFIVMNPPFHQTGKAD 284


>gi|261403492|ref|YP_003247716.1| methyltransferase small [Methanocaldococcus vulcanius M7]
 gi|261370485|gb|ACX73234.1| methyltransferase small [Methanocaldococcus vulcanius M7]
          Length = 196

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157
           ILDLG G G + +AL  E    K V + DI+ +A+++AK N   N + E +D   + SD 
Sbjct: 59  ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-ENYDIRVVHSDL 114

Query: 158 FSSVEG-LFDVIVSNPP 173
           + +V+   +D I++NPP
Sbjct: 115 YENVKDRKYDKIITNPP 131


>gi|284033968|ref|YP_003383899.1| methyltransferase small [Kribbella flavida DSM 17836]
 gi|283813261|gb|ADB35100.1| methyltransferase small [Kribbella flavida DSM 17836]
          Length = 206

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFS 159
           +LDLG G G +   L  E+P      VD++ +ALE+   NA   GV +R    L  D   
Sbjct: 62  VLDLGAGYGPIACGLAVENPDAVVWAVDVNNRALELTAINAAAAGVGDRVHPALPDDVPD 121

Query: 160 SVEGLFDVIVSNP 172
            V   FD I SNP
Sbjct: 122 DVR--FDEIWSNP 132


>gi|153835710|ref|ZP_01988377.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01]
 gi|148867643|gb|EDL66931.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL+ ++ NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVADQLEVFLPQ--NQPEGLIADVVVAN 231


>gi|74313138|ref|YP_311557.1| hypothetical protein SSON_2701 [Shigella sonnei Ss046]
 gi|73856615|gb|AAZ89322.1| putative enzyme [Shigella sonnei Ss046]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQG-VEC 172


>gi|56751193|ref|YP_171894.1| hypothetical protein syc1184_c [Synechococcus elongatus PCC 6301]
 gi|140216|sp|P08442|Y1184_SYNP6 RecName: Full=Uncharacterized protein syc1184_c
 gi|48010|emb|CAA28921.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|56686152|dbj|BAD79374.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 417

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 6/144 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           DS L  R RF    A+  S+       +    D Y        D   P         SA 
Sbjct: 5   DSTLLGRSRFSFFAAMPDSVTQA----VSALYDAYPFPPEPMQDGPPPGYNWRWHYPSAY 60

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF   R  +    RILD G GTG     L   +P  +   +DIS   L +A+     +GV
Sbjct: 61  AFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRSGV 120

Query: 147 SERFDTLQSDWF--SSVEGLFDVI 168
           ++R    Q   +  + + G FD I
Sbjct: 121 ADRIHFQQLSLYDVAQLPGEFDQI 144


>gi|323352768|ref|ZP_08087738.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis VMC66]
 gi|322121804|gb|EFX93550.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis VMC66]
          Length = 182

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLSQDVLVVCETDKEVKLPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|297527555|ref|YP_003669579.1| putative RNA methylase [Staphylothermus hellenicus DSM 12710]
 gi|297256471|gb|ADI32680.1| putative RNA methylase [Staphylothermus hellenicus DSM 12710]
          Length = 160

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DLG G G + +  +KE    K VG+D   + +  A+ NA  NGVS+R   +  D F+
Sbjct: 30  VYDLGCGDGRILIIAVKEFNVKKAVGIDKDPERIREARKNAEKNGVSDRIVLINDDIFN 88


>gi|295401929|ref|ZP_06811892.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109252|ref|YP_003987568.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
 gi|294976059|gb|EFG51674.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214353|gb|ADP72957.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
          Length = 200

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G + LA+ K  P      +DI+ +ALE+A  N   N ++      +SD F  V
Sbjct: 63  LDVGCGYGPIGLAVAKSFPNRHVDMIDINKRALELANENKRVNHIA-NVSIYESDLFEQV 121

Query: 162 -EGLFDVIVSNPP 173
            +  F  I++NPP
Sbjct: 122 GDKKFAAILTNPP 134


>gi|256811406|ref|YP_003128775.1| methyltransferase small [Methanocaldococcus fervens AG86]
 gi|256794606|gb|ACV25275.1| methyltransferase small [Methanocaldococcus fervens AG86]
          Length = 196

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157
           ILDLG G G + +AL  E    K V + DI+ +A+++AK N   N + E +D   + SD 
Sbjct: 59  ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-ENYDIRVVHSDL 114

Query: 158 FSSV-EGLFDVIVSNPP 173
           + +V +  +D I++NPP
Sbjct: 115 YENVKDKKYDKIITNPP 131


>gi|126729900|ref|ZP_01745713.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37]
 gi|126710019|gb|EBA09072.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37]
          Length = 406

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  AL++A++ A   GV++RF T Q D F ++  L      +DV+V +PP
Sbjct: 261 VDGSAPALDLARAGADAMGVADRFATRQGDAFDTLTALQEDDARYDVVVCDPP 313


>gi|119486111|ref|ZP_01620171.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
 gi|119456602|gb|EAW37731.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
          Length = 297

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 10/112 (8%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P TE +V   L   + R++ R   +ILDLG GTG+  L L +  P  + +G+D+S   L 
Sbjct: 84  PPTEPIVRQGLIDRI-RVKPR---QILDLGCGTGSTTLRLKQAFPEAEVIGIDLSPYMLV 139

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVD 181
           +A+  A   G+  +F    ++     +G FD++ ++      PP +   I  
Sbjct: 140 VAELKAKKAGLEIQFHHANAEDTGFPDGSFDLVSASLLFHETPPDVAQTITQ 191


>gi|317061177|ref|ZP_07925662.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12]
 gi|313686853|gb|EFS23688.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12]
          Length = 222

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           L++GTG G + + LL +  F   +   VDI    +++AK NA  NGVS RF       FS
Sbjct: 47  LEIGTGNGILPI-LLSQRGFVSKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFS 105

Query: 160 SVEGLFDVIVSNPPYIE 176
             +  +  I +NPPY++
Sbjct: 106 E-KNAYTQIFANPPYMK 121


>gi|309810081|ref|ZP_07703927.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169580|gb|EFO71627.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDDQEQFGLILTNPP 138


>gi|291542880|emb|CBL15990.1| Predicted N6-adenine-specific DNA methylase [Ruminococcus bromii
           L2-63]
          Length = 371

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
           F+  G DI   AL IAK NA   GV++R      D     +E  F  I++NPPY E ++
Sbjct: 252 FRATGYDIDDSALAIAKKNAEIAGVADRITFANRDIKDFELEDGFQTIITNPPYGERLL 310


>gi|302887024|ref|XP_003042401.1| hypothetical protein NECHADRAFT_72681 [Nectria haematococca mpVI
           77-13-4]
 gi|256723311|gb|EEU36688.1| hypothetical protein NECHADRAFT_72681 [Nectria haematococca mpVI
           77-13-4]
          Length = 340

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D  N RL L    F         +++ L  + P      V R+LDLGTGTG   L    E
Sbjct: 70  DIENERLDLQHHLFL------YTLENKLGLAPPNDHDAKVKRVLDLGTGTGIWALDYADE 123

Query: 119 SPFFKGVGVDISCKALEIAKSN 140
            P  + +G+D+S    E    N
Sbjct: 124 HPEAEVIGIDLSPTQPEFVPPN 145


>gi|269124561|ref|YP_003297931.1| methyltransferase small [Thermomonospora curvata DSM 43183]
 gi|268309519|gb|ACY95893.1| methyltransferase small [Thermomonospora curvata DSM 43183]
          Length = 484

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 15/131 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V   LDLGTG G   L L   +        D++ +AL +A+ +   +G+ +  + L+ 
Sbjct: 148 RPVDNALDLGTGCGVQALHLRDRAARI--TATDLNPRALALARLSFALSGLKD-VELLEG 204

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             +  V+   FD+IVSNPP+   VI    GL  R        + G+ G    R +  G +
Sbjct: 205 SLYEPVKDRRFDLIVSNPPF---VISPGGGLVYR--------ESGLPGDEVCRRLVGGAA 253

Query: 215 RHLNKDGLCSV 225
             L   G C +
Sbjct: 254 ERLTAGGWCQM 264


>gi|191174002|ref|ZP_03035519.1| putative methyltransferase [Escherichia coli F11]
 gi|190905693|gb|EDV65315.1| putative methyltransferase [Escherichia coli F11]
 gi|323955811|gb|EGB51569.1| hypothetical protein ERLG_03075 [Escherichia coli H263]
          Length = 257

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 57  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 116

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 117 ILQWITQQTVRFDLIISNPPYYQQG-VEC 144


>gi|92116762|ref|YP_576491.1| methyltransferase type 11 [Nitrobacter hamburgensis X14]
 gi|91799656|gb|ABE62031.1| Methyltransferase type 11 [Nitrobacter hamburgensis X14]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 17/175 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115
           WRD+ +   T    T        L +D ALA  +  I   D    +L++G G G  C  L
Sbjct: 24  WRDWASKFGTALGATTRTGTAKMLEID-ALARRMSAIGLGDAPAHVLEVGCGNGLNCFGL 82

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGL---FDVIVS 170
             + P  +  G+D + + ++ A+  AV NG  +R  F    +   S+  GL   +DV+ +
Sbjct: 83  AAQFPRMQLDGIDYTAEMIDAAREAAVANGFQDRSSFRIGNALELSAASGLLAQYDVVFT 142

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGI----------DGLSHYRTIADGVSR 215
           +   I    V+     + D   R+   G +          D  +H RT+ D  +R
Sbjct: 143 DRCLINIESVELQMRAITDLAARVREGGHLIMIENSMATYDRQNHCRTLLDMPAR 197


>gi|82545028|ref|YP_408975.1| enzyme [Shigella boydii Sb227]
 gi|81246439|gb|ABB67147.1| putative enzyme [Shigella boydii Sb227]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 IQQWLTQQTVRFDLIISNPPYYQQ 168


>gi|82778001|ref|YP_404350.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|81242149|gb|ABB62859.1| putative enzyme [Shigella dysenteriae Sd197]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQG-VEC 172


>gi|319936707|ref|ZP_08011120.1| methyltransferase [Coprobacillus sp. 29_1]
 gi|319808264|gb|EFW04829.1| methyltransferase [Coprobacillus sp. 29_1]
          Length = 244

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 17/158 (10%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           + +E ++ +L + D   +++    D F         +D+ L  S   I K D+ +I+D G
Sbjct: 1   MSNEVVNYLLAYND---MKIIQRKDMFN------FSLDTVLLSSFCTINK-DLHKIIDFG 50

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-- 163
           T   A+ L L + +   + +G++I   A+++A  N   N +  +   + +D    V+   
Sbjct: 51  TNNAAIPLLLSRRTD-KEIIGIEIQKDAVDLAIKNVKLNHLENQITIIHNDIKDYVQTSE 109

Query: 164 LFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRISLD 197
            F +IV NPP+ +    S I +   L++   + +I+LD
Sbjct: 110 KFKLIVCNPPFFKVGERSHINENEYLQIARHEIKINLD 147


>gi|253565583|ref|ZP_04843038.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945862|gb|EES86269.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 237

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            RILD+GTGTG V L +L +      + ++I   A + A  N   +    R + +  D+ 
Sbjct: 39  ARILDIGTGTGLVAL-MLAQRCSASVIALEIDGTAAQQAAENITRSPWGSRIEVVCQDFR 97

Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +S+      +D IVSNPPY      D L       D + +     D LS Y  +  GVS
Sbjct: 98  LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             L+ +G  +V I  +       I  S+ L+
Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|193068411|ref|ZP_03049374.1| putative methyltransferase [Escherichia coli E110019]
 gi|192958363|gb|EDV88803.1| putative methyltransferase [Escherichia coli E110019]
          Length = 257

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 57  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 116

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 117 IQQWITQQTVRFDLIISNPPYYQQG-VEC 144


>gi|158335166|ref|YP_001516338.1| UbiE/COQ5 family methlytransferase [Acaryochloris marina MBIC11017]
 gi|158305407|gb|ABW27024.1| methyltransferase, UbiE/COQ5 family, putative [Acaryochloris marina
           MBIC11017]
          Length = 280

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 21/148 (14%)

Query: 77  ETELLVDSALAFSLPRIE---KRDVV--------RILDLGTGTGAVCLALLKESPFFKGV 125
           E  +  D+  AF+ P  E   +R+V+        RILDLG GTG++ L L    P  + +
Sbjct: 69  EAAVTYDAVTAFACPPHEMNLRREVLKSIQGQPQRILDLGCGTGSMTLMLKATYPQAEVI 128

Query: 126 GVDIS----CKALEIAKSNAVT----NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           G+D+S    C A   ++   +T    +G++E  D L++  F  +  +  V    PP I  
Sbjct: 129 GLDLSPYMLCHAQHKSQKAQLTIHWLHGLAEATD-LKAHSFDVI-SICMVFHEMPPRISR 186

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++      ++     I LDG  + L H
Sbjct: 187 LVLQECRRLLKSGGQLIILDGNQNRLRH 214


>gi|126733609|ref|ZP_01749356.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2]
 gi|126716475|gb|EBA13339.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2]
          Length = 313

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 20/117 (17%)

Query: 74  PRPETELLVDSALAFSLPR-------IEKRDVV--------RILDLGTGTGAVCLALLKE 118
           P  +  LL+D+A+AF           +E  D +        +ILD+G GT  + +A  K 
Sbjct: 129 PDDKIPLLIDAAMAFGTGHHGTTKGCLEAFDALLSDGFEGEKILDVGCGTAVLGMAAAKV 188

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSN 171
            P    +  DI   A+E+A++N ++NG+ +R   + +  F +      G +D+I +N
Sbjct: 189 LPH-PVLASDIDPVAVEVAQANVISNGLKDRVTCVVAAGFGAPALTENGPYDLIFAN 244


>gi|68536169|ref|YP_250874.1| putative transferase [Corynebacterium jeikeium K411]
 gi|68263768|emb|CAI37256.1| putative transferase [Corynebacterium jeikeium K411]
          Length = 559

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 19/145 (13%)

Query: 99  VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS 155
            R+LDLGTG+G  A+ LA   E    K  G DI  +AL  A++ A   G+ S   + +Q 
Sbjct: 175 ARVLDLGTGSGVLALVLAANAEVEPPKIFGSDIHARALNYARAAAAAQGLDSPLVNWVQG 234

Query: 156 DWF-----------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            WF           S+    FDVIV+NPP++    VD   LE  +    +  D G+   +
Sbjct: 235 SWFEPFSAESADTESTEAQRFDVIVANPPFVIGPSVD---LEAEEG--HVYRDSGLPLDA 289

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGY 229
             + + +   +HL   G   + IG+
Sbjct: 290 ASQLVVEQSVQHLAPGGHAHLLIGW 314


>gi|309806665|ref|ZP_07700661.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
 gi|308166970|gb|EFO69153.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|300820746|ref|ZP_07100896.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300526499|gb|EFK47568.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|323173107|gb|EFZ58738.1| hypothetical protein ECLT68_2521 [Escherichia coli LT-68]
 gi|324020033|gb|EGB89252.1| hypothetical protein HMPREF9542_01309 [Escherichia coli MS 117-3]
          Length = 219

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|295108645|emb|CBL22598.1| Predicted O-methyltransferase [Ruminococcus obeum A2-162]
          Length = 250

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I K + V  LD+GTGTG + + L  +       G++I  +  ++A+ + 
Sbjct: 36  MDAVLLSGFANIRKNETV--LDMGTGTGIIPILLKSKGKGGHLTGLEIQEECADMARRSV 93

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N +    D +  D   +        FDV+ SNPPY+
Sbjct: 94  RYNSLESDIDIICGDIKEAAATFGAASFDVVTSNPPYM 131


>gi|242088363|ref|XP_002440014.1| hypothetical protein SORBIDRAFT_09g024440 [Sorghum bicolor]
 gi|241945299|gb|EES18444.1| hypothetical protein SORBIDRAFT_09g024440 [Sorghum bicolor]
          Length = 401

 Score = 40.4 bits (93), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 14/86 (16%)

Query: 74  PRPE-TELLVDSALAFSL---PRIEK-----RDVV----RILDLGTGTGAVCLALLKESP 120
           P PE T +++D  LAF +   P  +      R+V+    R+LD GTGTG + +A LK   
Sbjct: 203 PDPEATNIIIDPGLAFGMGEHPTTKLCLLFLREVIKGGERVLDYGTGTGVLGIAALKMG- 261

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146
             +  G+DI  +A+  A  N + NG+
Sbjct: 262 ATQSTGIDIDPQAITSASENLLLNGL 287


>gi|330931014|ref|XP_003303237.1| hypothetical protein PTT_15368 [Pyrenophora teres f. teres 0-1]
 gi|311320884|gb|EFQ88665.1| hypothetical protein PTT_15368 [Pyrenophora teres f. teres 0-1]
          Length = 384

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 14/91 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--------AVTNGVS 147
           +D  RILDLG GTG  C+ +  E P  + +GVD+S    +    N         +    S
Sbjct: 150 KDPKRILDLGCGTGIWCMDMADEYPSAEILGVDLSPIQPQFTPPNCKFEIDDVTLPWTYS 209

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + FD      F ++ GL+  I S P   E +
Sbjct: 210 QHFD------FINIRGLYGSIGSWPTLYEQI 234


>gi|309803516|ref|ZP_07697609.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
 gi|309808222|ref|ZP_07702131.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308164400|gb|EFO66654.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308168510|gb|EFO70619.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDDQEQFGLILTNPP 138


>gi|284922525|emb|CBG35612.1| putative DNA-binding protein [Escherichia coli 042]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELENEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|261825067|pdb|3JWJ|A Chain A, Crystal Structure Analysis Of The Methyltransferase Domain
           Of Bacterial-Avhen1-Cn
 gi|261825068|pdb|3JWJ|B Chain B, Crystal Structure Analysis Of The Methyltransferase Domain
           Of Bacterial-Avhen1-Cn
          Length = 202

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +++ +  R++DLG G G +   LLK+S F +  GVD+S ++LEIA+ 
Sbjct: 15  LKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQE 61


>gi|94969003|ref|YP_591051.1| methyltransferase type 12 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551053|gb|ABF40977.1| Methyltransferase type 12 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 465

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 31/46 (67%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++++    R++DLG G G +  ALLKE  F +  G+D+S ++LEIA
Sbjct: 280 KLKEAGAQRVVDLGCGEGKLLRALLKEKQFKEIFGMDVSYRSLEIA 325


>gi|271498832|ref|YP_003331857.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586]
 gi|270342387|gb|ACZ75152.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 17/108 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPKDQPK 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLS 204
            +    DV+V+N           L   +R+  P IS+    GG  GLS
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPKAGGHLGLS 256


>gi|212715539|ref|ZP_03323667.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660906|gb|EEB21481.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
           16992]
          Length = 247

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L   SP      +D++ +AL++ + NA  NGV         +  S V
Sbjct: 109 LDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGVRNVRAVTADEIPSDV 168

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              FD+I SNPP    V  D L   +  + PR++  G
Sbjct: 169 T--FDLIWSNPPI--RVGKDVLHELLMTWLPRLNAGG 201


>gi|218442218|ref|YP_002380547.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
 gi|218174946|gb|ACK73679.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
          Length = 199

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E R    +LDLG GTG +   L  + P  +G G+D+S + L  A+     N   +R
Sbjct: 37  LEYVELRSAANVLDLGCGTGRLLHRLATQFPHLRGTGLDLSKEMLRQARQR---NQYPKR 93

Query: 150 FDTLQ--SDWFSSVEGLFDVIVS 170
              +Q  ++     +G FD + +
Sbjct: 94  LIYIQGNAESLPFAQGQFDAVFN 116


>gi|257870490|ref|ZP_05650143.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum
           EG2]
 gi|257804654|gb|EEV33476.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum
           EG2]
          Length = 200

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 3/74 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L+L   S     + +DI+ +A+++A+ NA  NG+ E  D   S+ + +
Sbjct: 63  ILDVGCGYGPIGLSLAYASQRPVEM-IDINQRAVDLAQGNAKRNGI-ENADIHASNIYET 120

Query: 161 V-EGLFDVIVSNPP 173
           + +G +  I+SNPP
Sbjct: 121 LHQGEYAAILSNPP 134


>gi|300021789|ref|YP_003754400.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523610|gb|ADJ22079.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+G + +A+ K  P  + V  D+  +++++A  N   NGV+ +    ++   + 
Sbjct: 153 VLDLGCGSGVLAIAVAKSLPHARIVAADMDAQSVKVAAENVRINGVARQIKVTEASATTH 212

Query: 161 VE----GLFDVIVSN 171
            +      FD++++N
Sbjct: 213 PDIRSRAPFDLLIAN 227


>gi|17231222|ref|NP_487770.1| hypothetical protein alr3730 [Nostoc sp. PCC 7120]
 gi|17132864|dbj|BAB75429.1| alr3730 [Nostoc sp. PCC 7120]
          Length = 460

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 32/46 (69%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +++ +  R++DLG G G +   LLK+S F +  GVD+S ++LEIA+
Sbjct: 276 LKQSNARRVIDLGCGQGNLLKMLLKDSFFEQITGVDVSYRSLEIAQ 321


>gi|312873656|ref|ZP_07733703.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325911620|ref|ZP_08174028.1| methyltransferase small domain protein [Lactobacillus iners UPII
           143-D]
 gi|311090909|gb|EFQ49306.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325476606|gb|EGC79764.1| methyltransferase small domain protein [Lactobacillus iners UPII
           143-D]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDDQEQFGLILTNPP 138


>gi|260767868|ref|ZP_05876803.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
 gi|260617377|gb|EEX42561.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
          Length = 342

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +D    F LP +     +  ++DLG G G + + + + +P      VD S  A+E A+ N
Sbjct: 179 LDQGTRFLLPHLPSDTTLNHVIDLGCGNGVLSVRMGQLNPQVNITCVDESFMAVESARQN 238

Query: 141 AVTNGVSER-FDTLQSDWFSSVEGLF-DVIVSNPPY-IESVIVDCLGLEV 187
            VTN   ER    + ++     E    D++V NPP+  +  I D +  ++
Sbjct: 239 LVTNLGQERNIACIANNCLDGFEAAHTDMVVCNPPFHQQQAITDHIAWQM 288


>gi|315169213|gb|EFU13230.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX1341]
 gi|315171542|gb|EFU15559.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX1342]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|315148961|gb|EFT92977.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX4244]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|313898104|ref|ZP_07831643.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2]
 gi|312957132|gb|EFR38761.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2]
          Length = 444

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 17/123 (13%)

Query: 60  FYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            ++++ ++SS +F    PR +TE+L   AL F+  ++  ++ V  LDL  G G + + L 
Sbjct: 260 IHDLKFSISSKSFYQVNPR-QTEILYGKALEFA--KLTGKETV--LDLYCGVGTISMFLA 314

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVS 170
           + +      G++I  +A+  A+ NA  NG++   + + SD     + L       DVIV 
Sbjct: 315 QRAKHV--TGIEIVPQAIRDARKNAALNGIAN-IEFVCSDAADYAKKLCEQGAHPDVIVV 371

Query: 171 NPP 173
           +PP
Sbjct: 372 DPP 374


>gi|309805440|ref|ZP_07699487.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           09V1-c]
 gi|312870886|ref|ZP_07730991.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           3008A-a]
 gi|329920991|ref|ZP_08277519.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           1401G]
 gi|308165258|gb|EFO67494.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           09V1-c]
 gi|311093576|gb|EFQ51915.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           3008A-a]
 gi|328935267|gb|EGG31747.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           1401G]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|157130292|ref|XP_001661874.1| prip interacting protein. pimt [Aedes aegypti]
 gi|108871934|gb|EAT36159.1| prip interacting protein. pimt [Aedes aegypti]
          Length = 526

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY-IESVIV 180
           K + +DI  K +E+AK NA   GV++R + +  ++    + L  DVI  +PP+   S + 
Sbjct: 391 KVIAIDIDPKKIEMAKHNAAVYGVADRIEFITGNFLQLADKLRADVIFLSPPWGGPSYLK 450

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKVDVVR 237
           D    EV D +  +      + +   R ++  V+ +L ++      ++  G N  V++ +
Sbjct: 451 D----EVYDLETSLIPVPATELMRKARMVSRNVAMYLPRNSNTQQLTMLAGPNNAVEIEQ 506

Query: 238 IFESRKLFLVNAFKDYG 254
            F  RKL  + A+  YG
Sbjct: 507 NFLDRKLIALTAY--YG 521


>gi|293410991|ref|ZP_06654567.1| O-methyltransferase [Escherichia coli B354]
 gi|293415844|ref|ZP_06658487.1| O-methyltransferase [Escherichia coli B185]
 gi|301021939|ref|ZP_07185898.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|331643199|ref|ZP_08344334.1| hypothetical protein ECHG_02469 [Escherichia coli H736]
 gi|291433492|gb|EFF06471.1| O-methyltransferase [Escherichia coli B185]
 gi|291471459|gb|EFF13943.1| O-methyltransferase [Escherichia coli B354]
 gi|299881406|gb|EFI89617.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|331039997|gb|EGI12217.1| hypothetical protein ECHG_02469 [Escherichia coli H736]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQ 168


>gi|91774271|ref|YP_566963.1| precorrin-8W decarboxylase [Methanococcoides burtonii DSM 6242]
 gi|91713286|gb|ABE53213.1| cobalt-precorrin-6Y C(15)-methyltransferase (decarboxylating)
           [Methanococcoides burtonii DSM 6242]
          Length = 183

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 35/55 (63%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +A SL +++ +D +   D+G GTGAV +   K +  FK V +D   +A+E++++N
Sbjct: 17  IAISLSKLDLKDGITFYDVGCGTGAVSIEASKTARNFKVVAIDAREEAIEVSRTN 71


>gi|56551929|ref|YP_162768.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|56543503|gb|AAV89657.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 415

 Score = 40.4 bits (93), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + L  L +    + +GV +S + L++A+  A   G+ +R      D + 
Sbjct: 178 RILDIGCGWGGMAL-FLGQIADVEVLGVTLSEEQLKVARKRAKEAGLDDRVKFQLID-YR 235

Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182
            V+G FD IVS        PPY ++    C
Sbjct: 236 EVKGRFDRIVSVGMFEHVGPPYYKNFFNHC 265


>gi|320580184|gb|EFW94407.1| Putative S-adenosylmethionine-dependent methyltransferase [Pichia
           angusta DL-1]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 23/135 (17%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPE------------TELLVDSALAFSLPRIEKRDVV 99
           H  LG +++++    L  + F   P+             E +VD   +   P       V
Sbjct: 8   HSKLGTKEYWDNFYKLEKENFAENPDDTGECWFADSGAEEKIVDFVFSNLDPN------V 61

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQ 154
            I DLGTG G +   +L+E    + VGVD S  +++ AK+ A TN ++  F       L+
Sbjct: 62  SICDLGTGNGHLLFEILQEGWKGQLVGVDYSEASVQFAKTIAKTNDLNVEFYQSDILNLE 121

Query: 155 SDWFSSVEGLFDVIV 169
             +  +  G FD+++
Sbjct: 122 DQFLKTNAGNFDLVL 136


>gi|327188145|gb|EGE55365.1| putative methyltransferase protein [Rhizobium etli CNPAF512]
          Length = 259

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LD+G G G       + +P  + VGVD+S + LE+A+  +   G+    F+   + + 
Sbjct: 31  RVLDIGCGAGQTTREAARAAPQGEAVGVDVSAEMLEVARQRSTAEGLRNVVFEQADAQFH 90

Query: 159 SSVEGLFDVIVS 170
           + +   FD+ +S
Sbjct: 91  AFLPASFDLCIS 102


>gi|325912951|ref|ZP_08175325.1| methyltransferase small domain protein [Lactobacillus iners UPII
           60-B]
 gi|325477765|gb|EGC80903.1| methyltransferase small domain protein [Lactobacillus iners UPII
           60-B]
          Length = 204

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|300920743|ref|ZP_07137149.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300412314|gb|EFJ95624.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 219

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVVIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|300725760|ref|ZP_07059230.1| methyltransferase small domain protein [Prevotella bryantii B14]
 gi|299776933|gb|EFI73473.1| methyltransferase small domain protein [Prevotella bryantii B14]
          Length = 247

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157
           ILD+GTGTG + L L +  P  +   ++I   A+  AK N   +  ++R         D+
Sbjct: 47  ILDIGTGTGVLSLMLAQRFPNAQIQAIEIDENAVLDAKDNFFASPFADRIKLEHIAFQDY 106

Query: 158 FSSVE---GLFDVIVSNPPYIESVIVDCLGL 185
              V+    ++D +V NPPY +  + +C  L
Sbjct: 107 IKEVKDTMPIYDSVVCNPPYFDKSL-ECNNL 136


>gi|257417159|ref|ZP_05594153.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis AR01/DG]
 gi|257158987|gb|EEU88947.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis ARO1/DG]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|257078398|ref|ZP_05572759.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis JH1]
 gi|294780143|ref|ZP_06745515.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis PC1.1]
 gi|256986428|gb|EEU73730.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis JH1]
 gi|294452686|gb|EFG21116.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis PC1.1]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|256960372|ref|ZP_05564543.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis Merz96]
 gi|293384345|ref|ZP_06630230.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis R712]
 gi|293388418|ref|ZP_06632926.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis S613]
 gi|312908546|ref|ZP_07767490.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312908984|ref|ZP_07767846.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis DAPTO 516]
 gi|256950868|gb|EEU67500.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis Merz96]
 gi|291078337|gb|EFE15701.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis R712]
 gi|291082193|gb|EFE19156.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis S613]
 gi|310625513|gb|EFQ08796.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis DAPTO 512]
 gi|311290684|gb|EFQ69240.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis DAPTO 516]
 gi|315149120|gb|EFT93136.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0012]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|167760309|ref|ZP_02432436.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704]
 gi|167662192|gb|EDS06322.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704]
          Length = 246

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S   ++K +    LDLG+GTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  MDAILLSSFATVKKNETA--LDLGSGTGILPILLEAKNEGAHYTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYI 175
             N + ++ D +  D    S++ G   F VI +NPPY+
Sbjct: 90  RHNHLQDKVDIITGDIKEASAIFGAASFHVITTNPPYM 127


>gi|301155360|emb|CBW14826.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parainfluenzae T3T1]
          Length = 215

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           D   ILD+GTGTG V L L + S    K   V++   A + A+ N   +    R    + 
Sbjct: 18  DCQHILDMGTGTGLVALMLAQRSHEHCKIEAVELDPLAAQQAQENFKASPWHNRLHLTRQ 77

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   +       FD+IV+NPPY
Sbjct: 78  DVQTYCLQTAHQFDLIVANPPY 99


>gi|298292265|ref|YP_003694204.1| Cyclopropane-fatty-acyl-phospholipid synthase [Starkeya novella DSM
           506]
 gi|296928776|gb|ADH89585.1| Cyclopropane-fatty-acyl-phospholipid synthase [Starkeya novella DSM
           506]
          Length = 405

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 9/160 (5%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL---TLSSDTF 72
           GL+SH V           +R+  +N + R+  +   H      +FY + L    + S  +
Sbjct: 89  GLASHPVQQALRRGWRALRRWHQSNPLKRAASNAQSHYDHP-PEFYALWLDSRMIYSCAY 147

Query: 73  EPRPETEL--LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            P PET L    ++ L     +++    +R+ ++G+G GA+ + L K         ++++
Sbjct: 148 FPTPETSLEDAQEAKLRHIAAKLKLEPGMRVAEIGSGWGALAIYLAKLG--VHVTAINVA 205

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            + L  +K  A   GV++R    + D +  + G FD +VS
Sbjct: 206 TEQLAESKKRAQAAGVADRITFFERD-YRELTGTFDRVVS 244


>gi|229547563|ref|ZP_04436288.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Enterococcus faecalis TX1322]
 gi|229307336|gb|EEN73323.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Enterococcus faecalis TX1322]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|227517373|ref|ZP_03947422.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Enterococcus faecalis TX0104]
 gi|227075243|gb|EEI13206.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Enterococcus faecalis TX0104]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|218288634|ref|ZP_03492911.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241291|gb|EED08466.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 316

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 7/80 (8%)

Query: 96  RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R  +R++D+GTGTG  A+  AL+      + V +D+   A+  A  N   NG+ +R D  
Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE---RVVAIDLDPVAVSAATDNVRKNGLEDRVDVR 232

Query: 154 QSDWFSSV--EGLFDVIVSN 171
           Q D  +++  +  FD+ V+N
Sbjct: 233 QGDLLAALRPDETFDLAVAN 252


>gi|20806632|ref|NP_621803.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515079|gb|AAM23407.1| SAM-dependent methyltransferases [Thermoanaerobacter tengcongensis
           MB4]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DLG G G + + +  ++      GV+I  + +++A  +   N +  R   +  D   
Sbjct: 48  RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSVAINSLENRIKIIHGD-VR 106

Query: 160 SVEGL-----FDVIVSNPPYI 175
            VE L     FDV+ SNPPY+
Sbjct: 107 EVEKLLGYEKFDVVTSNPPYM 127


>gi|319891505|ref|YP_004148380.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161201|gb|ADV04744.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323465323|gb|ADX77476.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 202

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 22/156 (14%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH     PD+  D+++       I  + +   +H       F   ++   SD        
Sbjct: 2   SHYYDAHPDAATDEKE-------ITYAYQQHQLHLTTDAGVFSRDQVDFGSD-------- 46

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            LLV + L    P  +K     I+D+G G G + L L K +P      +D++ +AL +A+
Sbjct: 47  -LLVHTFLNAHPPGQKKT----IVDVGCGYGPIGLMLAKVAPHDHITMLDVNHRALGLAE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
            NA  N +S      +SD  S V       +V+NPP
Sbjct: 102 KNAQRNQLS-NVTIQESDGLSQVANETQHYVVTNPP 136


>gi|315605276|ref|ZP_07880322.1| transferase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313093|gb|EFU61164.1| transferase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 562

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+G G G   L L   +   + V  D+S +A  + + NA  N  +   D  +
Sbjct: 215 RESVESALDVGCGCGIQALYLATHA--SRVVATDLSARACALTQFNAALNEAT--IDVRE 270

Query: 155 SDWFSSVEG-LFDVIVSNPPYI 175
              F  VEG  FD+IV+NPP++
Sbjct: 271 GSLFEPVEGETFDLIVTNPPFV 292


>gi|256783262|ref|ZP_05521693.1| hypothetical protein SlivT_02090 [Streptomyces lividans TK24]
 gi|289767135|ref|ZP_06526513.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697334|gb|EFD64763.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA ++P     D  R+LDLG G     L  L   P     GVD+S  AL+ A+  A   G
Sbjct: 29  LAHAVPG----DGARVLDLGCGGAEWLLRALTGHPRLTAEGVDVSASALDHARGAAARLG 84

Query: 146 VSERFDTLQSDW--FSSVEGLFDVIV 169
           V++R      D   F++  G FD+++
Sbjct: 85  VADRLTLHHEDAARFAAPHG-FDLVL 109


>gi|114705922|ref|ZP_01438825.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi
           HTCC2506]
 gi|114538768|gb|EAU41889.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi
           HTCC2506]
          Length = 288

 Score = 40.4 bits (93), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           I ++    +LDLGTG+   A+  A L   P       DI   A+++A+ NA  NGVS   
Sbjct: 144 IRRKRPKAVLDLGTGSAVLAIGAAKLGRLPVL---ATDIDPVAVDVARQNAGANGVSRLV 200

Query: 151 DTLQSDWFSSVE----GLFDVIVSN 171
           D   +  F S +    G FD+IV+N
Sbjct: 201 DVAIATGFRSPKIRERGPFDLIVAN 225


>gi|332708898|ref|ZP_08428869.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332352440|gb|EGJ32009.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 344

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 14/102 (13%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE------IAKSNAVTNGVSERF 150
           +V  +LD+G G+GA C AL +  P        I C  LE      IAK     +G+S+R 
Sbjct: 175 NVKHLLDVGGGSGAFCFALAQRYP-------QIHCTILELPTICKIAKEYIAESGLSDRV 227

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           DT   D+F       +D ++ +  + +     CL L  + F+
Sbjct: 228 DTCVGDFFKDPFPAGYDAVLFSNIFHDWGWEKCLYLAKQSFE 269


>gi|254479291|ref|ZP_05092632.1| Methyltransferase small domain superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034766|gb|EEB75499.1| Methyltransferase small domain superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 241

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DLG G G + + +  ++      GV+I  + +++A  +   N +  R   +  D   
Sbjct: 38  RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSVAINSLENRIKIIHGD-VR 96

Query: 160 SVEGL-----FDVIVSNPPYI 175
            VE L     FDV+ SNPPY+
Sbjct: 97  EVEKLLGYEKFDVVTSNPPYM 117


>gi|118587631|ref|ZP_01545041.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata
           IAM 12614]
 gi|118439253|gb|EAV45884.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata
           IAM 12614]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 9/107 (8%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISCKAL 134
           P + LL D      LP   K    R  DLG G G +  A+ +++P    + + +   +AL
Sbjct: 185 PASRLLADQ-----LPATLKG---RGADLGAGFGYLTRAVFEKAPKVTSMDLFEAEKRAL 236

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           ++A+ N          + + SD    +EG +D +VSNPP+ ++   D
Sbjct: 237 DLAEQNLAAFKGLRTMNGIWSDVTQGIEGPYDFVVSNPPFHQAGKAD 283


>gi|317502782|ref|ZP_07960888.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM
           15606]
 gi|315666093|gb|EFV05654.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM
           15606]
          Length = 305

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F + +L   +   E    T ++V + L F L         R+LD G GTG + +  LK  
Sbjct: 140 FIDAKLAFGTGNHET---TRMIVSTLLHFDLTD------KRVLDCGCGTGILGIVALKYG 190

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
                VG DI   ++E AK NA  N V E  +  Q D    + + G+FD++++N
Sbjct: 191 A-KSVVGYDIDEWSVENAKHNAEINNV-ENIEIYQGDANVLNHISGVFDIVLAN 242


>gi|302553085|ref|ZP_07305427.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470703|gb|EFL33796.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM
           40736]
          Length = 512

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L   + +   +    D++ +AL I       +G S   D  +
Sbjct: 169 RRPVAAALDLGTGSGVQALHAARHA--TRVTATDLNPRALHITALTLALSG-SPAADLRE 225

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  V  +  +D+IVSNPP+   VI     L  R        DGG+ G    RT+   
Sbjct: 226 GSLFDPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVSE 274

Query: 213 VSRHLNKDGLCS 224
               LN+ G   
Sbjct: 275 AGERLNEGGFAQ 286


>gi|256854686|ref|ZP_05560050.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis T8]
 gi|256710246|gb|EEU25290.1| type I restriction modification system protein HsdMI [Enterococcus
           faecalis T8]
 gi|315030629|gb|EFT42561.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX4000]
          Length = 529

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|254555737|ref|YP_003062154.1| 16S RNA methylase [Lactobacillus plantarum JDM1]
 gi|254044664|gb|ACT61457.1| 16S RNA methylase [Lactobacillus plantarum JDM1]
          Length = 202

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG G + +AL  +SP      VD++  AL +A+ N   N ++   +    D +  
Sbjct: 63  MLDLGTGYGPIGMALAYQSPERTVDMVDVNELALSLARKNVALNQITNT-NIFTFDVYQQ 121

Query: 161 VEGL-FDVIVSNPP 173
           V    +  IV+NPP
Sbjct: 122 VTATNYAAIVTNPP 135


>gi|254502058|ref|ZP_05114209.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11]
 gi|222438129|gb|EEE44808.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11]
          Length = 207

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +L+LG GTG   +A  K  P  +  G+DIS + LE A++N    G+S+R   ++ D
Sbjct: 38  VLELGCGTGRNLIAAAKRYPKARFYGLDISEQMLETARANIEKAGLSDRIILVRGD 93


>gi|153826532|ref|ZP_01979199.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739712|gb|EDM53919.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 240

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D   W
Sbjct: 46  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADILHW 105

Query: 158 FSSVEGLFDVIVSNPPYIES 177
              +   F  I+ NPPY  S
Sbjct: 106 --QLSKRFAAIICNPPYFNS 123


>gi|124512804|ref|XP_001349758.1| methyl transferase-like protein, putative [Plasmodium falciparum
           3D7]
 gi|23615175|emb|CAD52165.1| methyl transferase-like protein, putative [Plasmodium falciparum
           3D7]
          Length = 222

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 10/116 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPF 121
           + +D + P  +T   V+ AL   + +I  +D+  +L++G+G+G + L+L      +    
Sbjct: 20  IRNDVYLPSSDTFTFVE-ALEEEVDKIS-QDINIVLEMGSGSGYIILSLYEMLLSRNKKI 77

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYI 175
                VDI+ KA E  K+    N +    + ++++ F+++    LFD+++ NPPY+
Sbjct: 78  DMLYCVDINKKACECIKNLTYENKIF-NVEIIRNNLFNNIRRCELFDIVLFNPPYV 132


>gi|322795182|gb|EFZ18004.1| hypothetical protein SINV_01677 [Solenopsis invicta]
          Length = 215

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 23/117 (19%)

Query: 71  TFEPRPETELLVDS------ALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESP 120
            +EP  ++ LL+D+       L    PRI        L++G+G+G    A+ +AL K + 
Sbjct: 16  VYEPSEDSYLLIDTLEADLNILHAMKPRI-------CLEIGSGSGIVITALAMALKKHNV 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
            F  + +DI+  A    +  ++ N V    D +Q +    ++    FD+++ NPPY+
Sbjct: 69  HF--IAIDINPDACRATRRTSLLNSVD--VDVVQMNLLDCIQAERTFDIVLFNPPYV 121


>gi|225558081|gb|EEH06366.1| methyltransferase [Ajellomyces capsulatus G186AR]
 gi|325095806|gb|EGC49116.1| methyltransferase [Ajellomyces capsulatus H88]
          Length = 343

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG   L    E P  + +GVD+S       +   V+  V    D ++++W  
Sbjct: 110 RALDLGTGTGLWALDFGDEFPSSQAIGVDLSP-----IQPTWVSPNVKFYVDDIETEWGY 164

Query: 160 SVEGLFDVI 168
           S E  FD+I
Sbjct: 165 SREEAFDII 173


>gi|118465195|ref|YP_879415.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium avium 104]
 gi|118166482|gb|ABK67379.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium avium 104]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 30/196 (15%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+++                +LD G G  AV L L +    F  VG+D S  
Sbjct: 34  EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 81

Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+++A+  A   G+ S  F+      F+  +G F  IV      +S +   + +E+R+  
Sbjct: 82  AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 135

Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVV---RIFES 241
            R  +     G S++  +       A+G    + +D L  V +G    +D +   RI  +
Sbjct: 136 QRSIVQAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIRPARIHAN 194

Query: 242 RKLFLVNAFKDYGGND 257
                + AF+ + G D
Sbjct: 195 VPENFLAAFEAFAGAD 210


>gi|26248940|ref|NP_754980.1| hypothetical protein c3099 [Escherichia coli CFT073]
 gi|91211902|ref|YP_541888.1| hypothetical protein UTI89_C2897 [Escherichia coli UTI89]
 gi|117624796|ref|YP_853709.1| hypothetical protein APECO1_3956 [Escherichia coli APEC O1]
 gi|237705085|ref|ZP_04535566.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331648322|ref|ZP_08349411.1| hypothetical protein ECIG_05212 [Escherichia coli M605]
 gi|26109346|gb|AAN81548.1|AE016764_230 Hypothetical protein yfiC [Escherichia coli CFT073]
 gi|91073476|gb|ABE08357.1| hypothetical protein YfiC [Escherichia coli UTI89]
 gi|115513920|gb|ABJ01995.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226901451|gb|EEH87710.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331042871|gb|EGI15012.1| hypothetical protein ECIG_05212 [Escherichia coli M605]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 ILQWITQQTVRFDLIISNPPYYQQ 168


>gi|262282766|ref|ZP_06060534.1| RsmD family RNA methyltransferase [Streptococcus sp. 2_1_36FAA]
 gi|262262057|gb|EEY80755.1| RsmD family RNA methyltransferase [Streptococcus sp. 2_1_36FAA]
          Length = 179

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +      + V V+   +A  I   N      S RFD L+ +   
Sbjct: 44  RVLDLYAGSGSLAIEAISRG-MEEAVLVEKDRRAQVIISENIQMTKESTRFDLLKMESGR 102

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 103 ALEILTGTFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 162

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 163 IWKQKIYGISK 173


>gi|262163962|ref|ZP_06031701.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
 gi|262027490|gb|EEY46156.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
          Length = 340

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   + N +  R     SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
             +  +D IV+NPP+
Sbjct: 261 DTKHKYDYIVTNPPF 275


>gi|260912576|ref|ZP_05919108.1| TrmA family RNA methyltransferase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633341|gb|EEX51499.1| TrmA family RNA methyltransferase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 502

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 13/113 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           F+  P++    ++  A+ L  + +R         + DL TGTG +   + +++   K VG
Sbjct: 324 FKVGPKSFYQTNTQQAYHLYDVARRFASLSGTETVYDLYTGTGTIANFVARQAK--KVVG 381

Query: 127 VDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173
           V+   +A+E AK N+  NG+S           + +D F +  G  DVI+++PP
Sbjct: 382 VEYVPEAIEDAKVNSELNGISNTTFYAGDMKDILNDEFIANNGQPDVIITDPP 434


>gi|159038496|ref|YP_001537749.1| methyltransferase type 12 [Salinispora arenicola CNS-205]
 gi|157917331|gb|ABV98758.1| Methyltransferase type 12 [Salinispora arenicola CNS-205]
          Length = 246

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 8/132 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  R L+ G G G    A+   +P  + VGVD+S K LE+A+     +    R   +  
Sbjct: 61  QDAGRTLEFGCGPGVYLEAVATHTPVPEIVGVDVSAKTLEVARRRVNDD---SRLRLVNG 117

Query: 156 DWFSSVE-GLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI---A 210
           D+++ +E G  DV++ +N  +    + D +   +    P   L G +  + HY       
Sbjct: 118 DFWADLELGKADVVICANAIHHLGRVRDVIERLMSFVRPGGVLIGNVWTMDHYHEYQRNV 177

Query: 211 DGVSRHLNKDGL 222
            G  RHL +  L
Sbjct: 178 HGEMRHLGRSAL 189


>gi|157158975|ref|YP_001463899.1| putative methyltransferase [Escherichia coli E24377A]
 gi|191167988|ref|ZP_03029790.1| putative methyltransferase [Escherichia coli B7A]
 gi|218696203|ref|YP_002403870.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|262828192|sp|A7ZQ20|TRMN6_ECO24 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828216|sp|B7LDG8|TRMN6_ECO55 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157081005|gb|ABV20713.1| putative methyltransferase [Escherichia coli E24377A]
 gi|190901995|gb|EDV61742.1| putative methyltransferase [Escherichia coli B7A]
 gi|218352935|emb|CAU98734.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|323944575|gb|EGB40644.1| methyltransferase small [Escherichia coli H120]
 gi|324118215|gb|EGC12111.1| methyltransferase small [Escherichia coli E1167]
          Length = 245

 Score = 40.4 bits (93), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 105 IQQWITQQTVRFDLIISNPPYYQQG-VEC 132


>gi|332991616|gb|AEF01671.1| putative RNA methyltransferase [Alteromonas sp. SN2]
          Length = 258

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 99  VRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ILD+GTGTG + L + ++S    K   +DI   A   A +N   +    +   +Q   
Sbjct: 55  AHILDIGTGTGILALMMAQQSLASAKITAIDIDEGAALQASANVGASPWPTKI-VVQHTK 113

Query: 158 FSSV--EGLFDVIVSNPPYIESV 178
            S +  +  FD IVSNPPY E V
Sbjct: 114 LSDLVADNTFDFIVSNPPYFEQV 136


>gi|156972541|ref|YP_001443448.1| ribosomal protein L11 methyltransferase [Vibrio harveyi ATCC
           BAA-1116]
 gi|166223500|sp|A7MXI3|PRMA_VIBHB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|156524135|gb|ABU69221.1| hypothetical protein VIBHAR_00173 [Vibrio harveyi ATCC BAA-1116]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL+ ++ NA  NGV+ + +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALQASRDNAERNGVANQLEVFLPQ--NQPEGLIADVVVAN 231


>gi|154280649|ref|XP_001541137.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150411316|gb|EDN06704.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 343

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG   L    E P  + +GVD+S       +   V+  V    D ++++W  
Sbjct: 110 RALDLGTGTGLWALDFGDEFPSSQAIGVDLSP-----IQPTWVSPNVKFYVDDIETEWGY 164

Query: 160 SVEGLFDVI 168
           S E  FD+I
Sbjct: 165 SREEAFDII 173


>gi|27365037|ref|NP_760565.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
 gi|81844705|sp|Q8DBY0|RSMC_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|27361183|gb|AAO10092.1| Ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
          Length = 340

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P  +    DI+  AL  +++    NG+  R     SD +S
Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPAIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTADDYRFIISNPPF 275


>gi|28899657|ref|NP_799262.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153839616|ref|ZP_01992283.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|260361497|ref|ZP_05774544.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|260878172|ref|ZP_05890527.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AN-5034]
 gi|260895468|ref|ZP_05903964.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|260903324|ref|ZP_05911719.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|38605240|sp|Q87KU2|PRMA_VIBPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|28807909|dbj|BAC61146.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149746855|gb|EDM57843.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|308088059|gb|EFO37754.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|308094108|gb|EFO43803.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AN-5034]
 gi|308109531|gb|EFO47071.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|308112847|gb|EFO50387.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|328472221|gb|EGF43091.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           10329]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLIADVVVAN 231


>gi|313836078|gb|EFS73792.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA2]
 gi|314929614|gb|EFS93445.1| methyltransferase small domain protein [Propionibacterium acnes
           HL044PA1]
 gi|314970610|gb|EFT14708.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA3]
 gi|328906180|gb|EGG25955.1| methyltransferase small domain protein [Propionibacterium sp. P08]
          Length = 206

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G +  AL +  P  + V VD++  A+++   NA   GV +R    + D     
Sbjct: 71  LDLGCGYGPIACALGRACPGSRVVSVDVNDLAIDLTTRNAKALGVGDRVHACRPDEVDP- 129

Query: 162 EGLFDVIVSNPP 173
           +  FD I SNPP
Sbjct: 130 DLRFDEIWSNPP 141


>gi|258511431|ref|YP_003184865.1| hypothetical protein Aaci_1451 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478157|gb|ACV58476.1| Protein of unknown function methylase putative [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 413

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD    TGA  +  L       G  VDIS  A+E+A+ NA  NGV +R D   ++
Sbjct: 235 DGAHVLDCFCHTGAFAVHALHYGAA-HGTAVDISADAVELARQNARRNGVLDRADFAVAN 293

Query: 157 WFSSVE------GLFDVIVSNPP 173
            F  +         +DV++ +PP
Sbjct: 294 AFDYLREQDARGARYDVVILDPP 316


>gi|254773164|ref|ZP_05214680.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 222

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 30/196 (15%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+++                +LD G G  AV L L +    F  VG+D S  
Sbjct: 25  EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 72

Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+++A+  A   G+ S  F+      F+  +G F  IV      +S +   + +E+R+  
Sbjct: 73  AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 126

Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVV---RIFES 241
            R  +     G S++  +       A+G    + +D L  V +G    +D +   RI  +
Sbjct: 127 QRSIVQAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIRPARIHAN 185

Query: 242 RKLFLVNAFKDYGGND 257
                + AF+ + G D
Sbjct: 186 VPENFLAAFEAFAGAD 201


>gi|254302821|ref|ZP_04970179.1| N6-adenine-specific methyltransferase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323013|gb|EDK88263.1| N6-adenine-specific methyltransferase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 182

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P IE  D +  LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYIE--DSI-FLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|24113916|ref|NP_708426.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30063976|ref|NP_838147.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|110806519|ref|YP_690039.1| hypothetical protein SFV_2638 [Shigella flexneri 5 str. 8401]
 gi|331678572|ref|ZP_08379247.1| hypothetical protein ECPG_01247 [Escherichia coli H591]
 gi|332278267|ref|ZP_08390680.1| conserved hypothetical protein [Shigella sp. D9]
 gi|24053019|gb|AAN44133.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30042232|gb|AAP17957.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|110616067|gb|ABF04734.1| putative enzyme [Shigella flexneri 5 str. 8401]
 gi|281601987|gb|ADA74971.1| hypothetical protein SFxv_2894 [Shigella flexneri 2002017]
 gi|331075032|gb|EGI46352.1| hypothetical protein ECPG_01247 [Escherichia coli H591]
 gi|332100619|gb|EGJ03965.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 285

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQG-VEC 172


>gi|330444964|ref|ZP_08308618.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328493082|dbj|GAA03115.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 294

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 26/131 (19%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  ++ +D+    I+D G G+G + +A LK   
Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTIIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171
             K +G+DI  +A+  ++ NA  NGVSE  +  L  D    ++   D++V+N        
Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVSENLELYLPKDQPEGIQA--DIVVANILAGPLRE 239

Query: 172 -PPYIESVIVD 181
             P I+S+I D
Sbjct: 240 LSPVIKSLIKD 250


>gi|229524747|ref|ZP_04414152.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229338328|gb|EEO03345.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv.
           albensis VL426]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ D  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDKIDVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|254172850|ref|ZP_04879524.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp.
           AM4]
 gi|214033006|gb|EEB73834.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp.
           AM4]
          Length = 195

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 35/163 (21%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G GA+ +   +   +   V  D++ +A+ IA+ N   NGV    +      + 
Sbjct: 59  RVLDLGCGYGAIGIVASRFVDYV--VMTDVNRRAVSIARKNLKINGVRNA-EVRWGSLYE 115

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V+G  FD I++NPP          G EV                   R I     RHLN
Sbjct: 116 PVKGEKFDSIITNPPV-------HAGKEV------------------LREIVINAPRHLN 150

Query: 219 KDGLCSVEIGYNQKVDVVRIF------ESRKLFLVNAFKDYGG 255
             GL  + I   Q    ++        E R+L   + ++ Y G
Sbjct: 151 DGGLLQLVIKTKQGAKYIKALMDEHFTEVRELAKGSGYRVYAG 193


>gi|212697534|ref|ZP_03305662.1| hypothetical protein ANHYDRO_02107 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675533|gb|EEB35140.1| hypothetical protein ANHYDRO_02107 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 374

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176
           +G DIS  A+++AK+NA+  GV E    L  D+   +++  F + +SNPPY E
Sbjct: 254 LGSDISKNAIKLAKNNALNAGVYEDITFLNKDFREINLKDNFGIFISNPPYGE 306


>gi|296110374|ref|YP_003620755.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154]
 gi|295831905|gb|ADG39786.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154]
          Length = 253

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 19/165 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +DLG GTGAV L     SP  K +G    V+I  +  E+A+ +   NG+ +R   L SD 
Sbjct: 53  VDLGAGTGAVGLFY---SP--KVIGKIKLVEIQPELAEMAQRSIEMNGLQKRVSVLLSDM 107

Query: 158 ---FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F+ ++ G  + ++SNPPY     +     +      R  L   + GL      A   
Sbjct: 108 KDIFNDIQPGSVETVLSNPPYFPLNEMTKTNHDTHYELARHELTIDLPGL------AQVA 161

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           ++ L  +G   +    ++  DV   FE RKL +      YG +DR
Sbjct: 162 NKLLKNNGKFYMVHRPDRLTDVFSAFEQRKLRIKRMQFVYGKSDR 206


>gi|291556131|emb|CBL33248.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum
           V10Sc8a]
          Length = 493

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  E L  SA  F+ P+ +      +LDL  G G + L++ + +   K +GV+I  +A+E
Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
            AK NA+ NG++   + + +D   +   L       DVI+ +PP
Sbjct: 338 NAKQNALANGIT-NCEFICADAAEAARILHSRSLRPDVIMVDPP 380


>gi|262196150|ref|YP_003267359.1| amino acid adenylation protein [Haliangium ochraceum DSM 14365]
 gi|262079497|gb|ACY15466.1| amino acid adenylation domain protein [Haliangium ochraceum DSM
            14365]
          Length = 2012

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 28/147 (19%)

Query: 54   ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            + GW   Y+ +   S +  E            +  ++ RI +    R+L++G GTG   L
Sbjct: 1026 LAGWTSSYDQQAIPSEEMLE-----------WVENTVERILETKPSRVLEIGCGTG---L 1071

Query: 114  ALLKESPFFKG-VGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWFSSV-EGLFDVIVS 170
             LL+ +P  +  VG+D S +ALE  + + A  + VS   +   +D F+ + +  FD ++ 
Sbjct: 1072 LLLRVAPHVERFVGMDASSQALEYLRPHVAEFDNVS--LEQRTADQFAGLPDDSFDAVIL 1129

Query: 171  N--------PPYIESVIVDCLGLEVRD 189
            N        P Y+E+VI  CL + VRD
Sbjct: 1130 NSVAQYFPSPEYLETVIAGCLSV-VRD 1155


>gi|37680915|ref|NP_935524.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
 gi|81859839|sp|Q7MHY6|RSMC_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|37199665|dbj|BAC95495.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
          Length = 340

 Score = 40.4 bits (93), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P  +    DI+  AL  +++    NG+  R     SD +S
Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTADDYRFIISNPPF 275


>gi|225018720|ref|ZP_03707912.1| hypothetical protein CLOSTMETH_02670 [Clostridium methylpentosum
           DSM 5476]
 gi|224948448|gb|EEG29657.1| hypothetical protein CLOSTMETH_02670 [Clostridium methylpentosum
           DSM 5476]
          Length = 243

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  +++      VG+DIS K L++A+       V  R   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAMEQGA-ASAVGIDISHKMLQVAREKTAFPQVDYRCMPIEEIDFP 103

Query: 160 SVEGLFDVIVSN 171
           S  G FDV++S+
Sbjct: 104 S--GSFDVVISS 113


>gi|323334230|gb|EGA75613.1| Mtq2p [Saccharomyces cerevisiae AWRI796]
          Length = 221

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155
           + ++G+G+G V   L++     +     + VDI+  ALE     A  N     F + +Q+
Sbjct: 46  VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212
           D  SS+ +   DV++ NPPY+ +  V D  G  E  D    ++L GG DG++    +   
Sbjct: 106 DLNSSIRDNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165

Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239
           + + L+ DG+  +     N+  +V++ F
Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193


>gi|302537499|ref|ZP_07289841.1| methyltransferase type 12 [Streptomyces sp. C]
 gi|302446394|gb|EFL18210.1| methyltransferase type 12 [Streptomyces sp. C]
          Length = 504

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +  ALLK+  + + +GVD+S +AL IA        + ER
Sbjct: 311 RVLDLGCGEGHLVQALLKDPAYTEVLGVDVSVRALTIAARRLRLERMGER 360


>gi|320007975|gb|ADW02825.1| Methyltransferase type 12 [Streptomyces flavogriseus ATCC 33331]
          Length = 500

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           R+LDLG G G +  ALLK+  F + VGVD+S +AL +A
Sbjct: 310 RVLDLGCGQGQLLQALLKDVRFTEIVGVDVSMRALTVA 347


>gi|240104027|ref|YP_002960336.1| Ribosomal RNA small subunit methyltransferase C (rsmC)
           [Thermococcus gammatolerans EJ3]
 gi|239911581|gb|ACS34472.1| Ribosomal RNA small subunit methyltransferase C (rsmC)
           [Thermococcus gammatolerans EJ3]
          Length = 195

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 35/163 (21%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G GA+ +   +   +   V  D++ +A+ IA+ N   NGV    +      + 
Sbjct: 59  RVLDLGCGYGAIGIVASRFVDYV--VMTDVNKRAVSIARKNLKINGVRNA-EVRWGSLYE 115

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V+G  FD I++NPP          G EV                   R I     RHLN
Sbjct: 116 PVKGEKFDSIITNPPV-------HAGKEV------------------LREIVINAPRHLN 150

Query: 219 KDGLCSVEIGYNQKVDVVRIF------ESRKLFLVNAFKDYGG 255
             GL  + I   Q    ++        E R+L   + ++ Y G
Sbjct: 151 DGGLLQLVIKTKQGAKYIKALMEETFTEVRELAKGSGYRVYAG 193


>gi|237736824|ref|ZP_04567305.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229420686|gb|EEO35733.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 393

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+ + +G   +A LKE+   K V +D    ALE+ + N   NG    + T++ D F
Sbjct: 218 TRFLDVFSSSGGFSMAALKENCK-KVVAIDKEPHALELCRENYELNGFEGNYTTMEGDAF 276

Query: 159 SSVEGL------FDVIVSNPP 173
             ++ L      +DVI  +PP
Sbjct: 277 LLLKTLVGRGEKYDVITLDPP 297


>gi|218682093|ref|ZP_03529694.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 894]
          Length = 191

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +  R V   LDLGTG+G + +A+  LK  P       DI   A ++A  N   NG++   
Sbjct: 46  VRSRPVRNALDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATKVAAENVRRNGIASGI 102

Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171
            T  +  F S      G FD+I++N
Sbjct: 103 VTRTAPGFHSTAFSEHGPFDLIIAN 127


>gi|169830047|ref|YP_001700205.1| hypothetical protein Bsph_4631 [Lysinibacillus sphaericus C3-41]
 gi|168994535|gb|ACA42075.1| Hypothetical ybxB protein [Lysinibacillus sphaericus C3-41]
          Length = 202

 Score = 40.4 bits (93), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D   AF +P I+      I D+G G G + L++ K +P      +DI+ +A+ ++
Sbjct: 48  SRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAKANPDRTVCMMDINERAVALS 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173
           + NA  NGV +      SD  S V+   +   I++NPP
Sbjct: 101 QKNAQVNGV-QNVRIFVSDGLSMVDKDIEAAAILTNPP 137


>gi|240850051|ref|YP_002971444.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii
           as4aup]
 gi|240267174|gb|ACS50762.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella grahamii
           as4aup]
          Length = 247

 Score = 40.0 bits (92), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D ++ILD+G G G +C  + +       VGVD +   +E+AK++A  N +S  + T+ ++
Sbjct: 64  DNLKILDIGCGGGLLCEPMARLGAMV--VGVDAAQTNIEVAKTHAAQNDLSIDYRTMTAE 121

Query: 157 WFSSVEGLFDVIVS 170
             ++    FD+I++
Sbjct: 122 ALANEGEKFDIILN 135


>gi|167394422|ref|XP_001733536.1| dimethyladenosine transferase [Entamoeba dispar SAW760]
 gi|165894697|gb|EDR22603.1| dimethyladenosine transferase, putative [Entamoeba dispar SAW760]
          Length = 252

 Score = 40.0 bits (92), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 6/76 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG-VGVDISCK-ALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L++G GTG + + +L   PF K  + ++I  + A E+ K  +VT+ V ++ + +Q D+ 
Sbjct: 42  VLEIGPGTGNLTMKML---PFCKKLIAIEIDPRMAAELKKRVSVTDYV-KKLEIIQGDFL 97

Query: 159 SSVEGLFDVIVSNPPY 174
                 FDV VSN PY
Sbjct: 98  KVELPYFDVCVSNTPY 113


>gi|54297147|ref|YP_123516.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris]
 gi|53750932|emb|CAH12343.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris]
          Length = 390

 Score = 40.0 bits (92), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LDL T TG   L   K     +   VD S +A+E AK+NAV N ++   F    +  +
Sbjct: 223 RVLDLYTFTGGFALHAAKAGAL-QVTAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281

Query: 159 SSVEGLFDVIVSNPP 173
             + G +DV++ +PP
Sbjct: 282 LKMAGEYDVVILDPP 296


>gi|315055317|ref|XP_003177033.1| hypothetical protein MGYG_01117 [Arthroderma gypseum CBS 118893]
 gi|311338879|gb|EFQ98081.1| hypothetical protein MGYG_01117 [Arthroderma gypseum CBS 118893]
          Length = 294

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 27/95 (28%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA-VTNGVSE-----RFDT 152
           ILDLGTG G++ L LL+E   F G  VGVD S K++E+A+  A  ++G  E     RF+ 
Sbjct: 109 ILDLGTGNGSM-LTLLREEGGFTGPMVGVDYSIKSIELARQLAGQSDGQKEGDGGIRFEV 167

Query: 153 L------------------QSDWFSSVEGLFDVIV 169
                              + DWF   +G FD+++
Sbjct: 168 WDILDPRHEEDIRGGVFGKEVDWFPFEQGGFDIVL 202


>gi|153938423|ref|YP_001389425.1| hypothetical protein CLI_0117 [Clostridium botulinum F str.
           Langeland]
 gi|152934319|gb|ABS39817.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295317535|gb|ADF97912.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 246

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174
             N + E+   ++ D      ++G+   DV+  NPPY
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPY 126


>gi|320155418|ref|YP_004187797.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
 gi|319930730|gb|ADV85594.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
          Length = 340

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P  +    DI+  AL  +++    NG+  R     SD +S
Sbjct: 203 KVLDFGCGAGVIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTADDYRFIISNPPF 275


>gi|260771799|ref|ZP_05880717.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14]
 gi|260613091|gb|EEX38292.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14]
          Length = 240

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 10/127 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G GTG + L   +     +   VDI  +A   A +N   +  S R + +  D  +
Sbjct: 45  RLLDIGCGTGLLSLMCAQRFTHSQICAVDIDQQAFLAASNNIRRSVWSSRIEVMHGDINT 104

Query: 160 -SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
                 FD I+ NPPY  S      G   +     I+     + LSH + + D  ++HL 
Sbjct: 105 LRFTQPFDAIICNPPYFNS------GQPAQQQTRAIARH--TETLSH-QQLLDCFAQHLP 155

Query: 219 KDGLCSV 225
             G  S+
Sbjct: 156 PQGTASL 162


>gi|222151580|ref|YP_002560736.1| hypothetical protein MCCL_1333 [Macrococcus caseolyticus JCSC5402]
 gi|222120705|dbj|BAH18040.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 22/126 (17%)

Query: 51  IHRILGWRDFYN----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +H I    DF+N    VRL        P    E++    +   LP +  +    ILD+G 
Sbjct: 1   MHNIYDNDDFFNRYKEVRLN-------PTSYNEMIEVPRIKELLPNLYNK---TILDIGC 50

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL 164
           G G +   +L++SP  +  G+DIS   ++ AK N     V+     L +D+  F SV   
Sbjct: 51  GMGQLVQYMLEQSP-IQITGIDISSNMIQKAKENIQDQHVT----FLNNDFMEFDSVAD- 104

Query: 165 FDVIVS 170
           +DVIVS
Sbjct: 105 YDVIVS 110


>gi|315231428|ref|YP_004071864.1| LSU methyltransferase [Thermococcus barophilus MP]
 gi|315184456|gb|ADT84641.1| LSU methyltransferase [Thermococcus barophilus MP]
          Length = 396

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           ++LD+ T TG  A+  A+       K + +D S +A+E AK NA  NGV ++ + +    
Sbjct: 220 KVLDVFTYTGGFAIHAAVAGAE---KVIAIDKSPRAIEQAKENAKLNGVEDKMEFIVGSA 276

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E L      FD+++ +PP
Sbjct: 277 FPEMEKLQKRGEKFDIVILDPP 298


>gi|27364635|ref|NP_760163.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6]
 gi|320155029|ref|YP_004187408.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus
           MO6-24/O]
 gi|38605292|sp|Q8DD03|PRMA_VIBVU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|27360780|gb|AAO09690.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6]
 gi|319930341|gb|ADV85205.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus
           MO6-24/O]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 87  AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  L  +E  D+    ++D G G+G + +A +K     K +G+DI  +AL  +K NA  N
Sbjct: 147 ALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLG-AEKVIGIDIDPQALLASKDNAQRN 205

Query: 145 GVSERFDT-LQSDWFSSVEGLF-DVIVSN 171
           GV+++ D  L  D     EGL  DV+V+N
Sbjct: 206 GVADQLDVYLPQD---QPEGLLADVVVAN 231


>gi|88855439|ref|ZP_01130103.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1]
 gi|88815346|gb|EAR25204.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1]
          Length = 207

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + L L  ESP      VD++ +AL++ ++NA    +      L  D    
Sbjct: 63  LLDLGCGWGPMALTLALESPHATVWAVDVNERALDLVRANAKKLSIPNINAVLPGDVPED 122

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           V   F  I SNPP    V  D L   +  + PR+ LD 
Sbjct: 123 VT--FMSIWSNPPI--RVGKDELHNILETWLPRLELDA 156


>gi|218441230|ref|YP_002379559.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
 gi|218173958|gb|ACK72691.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
          Length = 286

 Score = 40.0 bits (92), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 11/95 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDLG GTG+  L LLK++ F  G  +G+D+S   L +A   A   G+S ++    +  
Sbjct: 102 RILDLGCGTGSTTL-LLKQT-FVDGEIIGIDLSPYMLAMANYKAKQAGLSVQWQQGNALK 159

Query: 158 FSSVEGLFDVIVSN------PPYI-ESVIVDCLGL 185
               +  FDV+ ++      PP + ES++ +C  L
Sbjct: 160 THFPDASFDVVTASLLFHETPPMVAESILKECFRL 194


>gi|262037709|ref|ZP_06011151.1| putative methyltransferase UbiE [Leptotrichia goodfellowii F0264]
 gi|261748181|gb|EEY35578.1| putative methyltransferase UbiE [Leptotrichia goodfellowii F0264]
          Length = 235

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 7/90 (7%)

Query: 82  VDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           V+  + FSL P ++ +   ++LDLG G G  C+  +K     K VG+DIS K L+IA+  
Sbjct: 30  VEKPMLFSLLPDLKNK---KVLDLGCGYGENCVKFIKMGA-EKVVGIDISEKMLDIAQKE 85

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                V   +  L  +  S +   FD+IVS
Sbjct: 86  NSDKKVV--YLNLAMEDISQINEKFDIIVS 113


>gi|261192711|ref|XP_002622762.1| methyltransferase [Ajellomyces dermatitidis SLH14081]
 gi|239589244|gb|EEQ71887.1| methyltransferase [Ajellomyces dermatitidis SLH14081]
 gi|239610220|gb|EEQ87207.1| methyltransferase [Ajellomyces dermatitidis ER-3]
          Length = 342

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG   L    E P  + +GVD+S       +   V   V    D +++DW  
Sbjct: 109 RALDLGTGTGLWALDFGDEYPSAQAIGVDLSP-----IQPTWVAPNVKFYVDDIETDWAY 163

Query: 160 SVEGLFDVIVS 170
           S +  FD+I S
Sbjct: 164 SRDEPFDLIHS 174


>gi|218295159|ref|ZP_03495995.1| methyltransferase small [Thermus aquaticus Y51MC23]
 gi|218244362|gb|EED10887.1| methyltransferase small [Thermus aquaticus Y51MC23]
          Length = 374

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 11/151 (7%)

Query: 53  RILGWR-DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           RILG    FY++    S+   +   +  LL+  AL  ++P ++ R   R+LDLG G GA+
Sbjct: 192 RILGQAYTFYHLPGVFSAGRVD---KASLLLLEALVTAVPSLKGR---RVLDLGAGYGAL 245

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            L L +       V  D+    L + +S    NG+  R      D   + E  FD+IV+N
Sbjct: 246 TLPLARLGAEVTAVEDDL-VSVLSLRRSLE-ENGLEARALHSDVDEALTPEERFDIIVTN 303

Query: 172 PPYI--ESVIVDCLGLEVRDFDPRISLDGGI 200
           PP+    +VI+D     V     R+   GG 
Sbjct: 304 PPFHVGGAVILDVAQAFVEAAAARLKPGGGF 334


>gi|239918289|ref|YP_002957847.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
 gi|239839496|gb|ACS31293.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
          Length = 558

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 12/110 (10%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L V  A        ++R V R LD+G G G   L LL  +        D+S +AL 
Sbjct: 164 PEHVLGVGRASPTLAGATQRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALA 221

Query: 136 IAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
             + N + N          + +R      D  + V G  FD++VSNPP++
Sbjct: 222 FTRFNLLLNADVLGLDRERLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271


>gi|153215832|ref|ZP_01950164.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124114549|gb|EAY33369.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 216

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+G GTG + L   +  P      +DI   A   A+ N   +  +E  +   +D   W
Sbjct: 22  ILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAEHIECQHADILHW 81

Query: 158 FSSVEGLFDVIVSNPPYIES 177
             S    F  I+ NPPY  S
Sbjct: 82  LPSKR--FAAIICNPPYFNS 99


>gi|21225714|ref|NP_631493.1| hypothetical protein SCO7445 [Streptomyces coelicolor A3(2)]
 gi|7160122|emb|CAB76308.1| hypothetical protein SC5C11.02 [Streptomyces coelicolor A3(2)]
          Length = 245

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+LDLG G     L  L   P     GVD+S  AL+ A+  A   GV++R      D
Sbjct: 36  DGARVLDLGCGGAEWLLRALAGHPRLTAEGVDVSASALDHARGAAARLGVADRLTLHHED 95

Query: 157 W--FSSVEGLFDVIV 169
              F++  G FD+++
Sbjct: 96  AARFAAPHG-FDLVL 109


>gi|327355275|gb|EGE84132.1| methyltransferase [Ajellomyces dermatitidis ATCC 18188]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLGTGTG   L    E P  + +GVD+S       +   V   V    D +++DW  
Sbjct: 109 RALDLGTGTGLWALDFGDEYPSAQAIGVDLSP-----IQPTWVAPNVKFYVDDIETDWAY 163

Query: 160 SVEGLFDVIVS 170
           S +  FD+I S
Sbjct: 164 SRDEPFDLIHS 174


>gi|308066857|ref|YP_003868462.1| hypothetical protein PPE_00022 [Paenibacillus polymyxa E681]
 gi|305856136|gb|ADM67924.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 251

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 13/119 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+R+  S + F         +D+ L      I +R   +ILDL TG G V L LL    
Sbjct: 17  HNLRIIQSDEVFS------FSMDAVLLARFAGIPQRG--KILDLCTGNGVVPL-LLTTRT 67

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
                G++I  +  ++A+ +   NG+       + D    V     G++D I  NPPY+
Sbjct: 68  KASIEGIEIQPRLADMARRSVSLNGLESAIQIREGDLRELVHITGHGVYDAITVNPPYM 126


>gi|238762789|ref|ZP_04623758.1| Methyltransferase small [Yersinia kristensenii ATCC 33638]
 gi|238699094|gb|EEP91842.1| Methyltransferase small [Yersinia kristensenii ATCC 33638]
          Length = 248

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LD+G G+G + L + + S     + GV++  +A + A SN   +  ++R    + D  
Sbjct: 50  KVLDIGCGSGLIALMIAQRSASEVIIDGVELEPEAAQQAISNVAQSPWADRVRIYEQDVH 109

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    + 
Sbjct: 110 QFAENHLHQYDLIVSNPPYFAPAVA 134


>gi|218690691|ref|YP_002398903.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|262828117|sp|B7MYK8|TRMN6_ECO81 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218428255|emb|CAR09174.2| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
          Length = 245

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 45  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTAD 104

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+++SNPPY +   V+C
Sbjct: 105 ILQWITQQTVRFDLVISNPPYYQQG-VEC 132


>gi|301163366|emb|CBW22916.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 237

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            RILD+GTGTG V L +L +      + ++I   A + A  N   +    R + +  D+ 
Sbjct: 39  ARILDIGTGTGLVAL-MLAQRCSASVIALEIDETAAQQAAENITRSPWGSRIEVVCQDFR 97

Query: 158 -FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +S+      +D IVSNPPY      D L       D + +     D LS Y  +  GVS
Sbjct: 98  LYSNKNNSLKYDTIVSNPPY----FTDSLKCP----DSQRNTARHNDNLS-YEELLKGVS 148

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             L+ +G  +V I  +       I  S+ L+
Sbjct: 149 NLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|296425053|ref|XP_002842058.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638315|emb|CAZ86249.1| unnamed protein product [Tuber melanosporum]
          Length = 351

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 20/110 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETE------------LLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +Y ++LT S     P  E E            LL+D  L F  P  +  D+ RILD+GTG
Sbjct: 64  WYPIKLTWSRKYLIPNDEAEQDRLDIIHHVFLLLLDGKL-FRAPIGD--DIQRILDVGTG 120

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           TG   +   +  P  + +G D+S       + + V   VS + D  +SDW
Sbjct: 121 TGIWAMDAGEAYPAAEVIGTDLSP-----IQPSWVPPNVSFQIDDAESDW 165


>gi|212637715|ref|YP_002314240.1| putative SAM-dependent methyltransferase [Shewanella piezotolerans
           WP3]
 gi|212559199|gb|ACJ31653.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERF 150
           +I K D + +LD+GTG   +   L  +S  ++ VG D+   +LE A+     N G+S +F
Sbjct: 96  KIPKGDKITVLDIGTGANVIYPLLGVQSYGWQFVGSDVDPASLENAQQIFAKNPGISGKF 155

Query: 151 DT-LQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLG 184
              LQ +      G+      FDV + NPP+  S+     G
Sbjct: 156 SCRLQGNTQHVFNGIINKDDRFDVTLCNPPFHASLAEASAG 196


>gi|126735895|ref|ZP_01751639.1| Predicted SAM-dependent methyltransferase [Roseobacter sp. CCS2]
 gi|126714452|gb|EBA11319.1| Predicted SAM-dependent methyltransferase [Roseobacter sp. CCS2]
          Length = 401

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  ALE+A + A   GVS+RF T + D F  +  L      FDV++ +PP
Sbjct: 256 VDGSAPALELAATGASKMGVSDRFTTRKGDAFDVLAALAEEGETFDVVICDPP 308


>gi|238797913|ref|ZP_04641404.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC
           43969]
 gi|238718218|gb|EEQ10043.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC
           43969]
          Length = 296

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 20/136 (14%)

Query: 87  AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  L  ++  D+V   ++D G G+G + +A LK       +G+DI  +A++ ++ NA  N
Sbjct: 146 ALCLQWLDGLDLVGKTVIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRN 204

Query: 145 GVSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGI 200
           GVSER    L  D  + +    DV+V+N           L   +R+  P IS   + GG 
Sbjct: 205 GVSERLALYLAKDQPADLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGH 252

Query: 201 DGLSH-YRTIADGVSR 215
            GLS    T A GV+ 
Sbjct: 253 LGLSGVLATQAAGVAE 268


>gi|332637903|ref|ZP_08416766.1| hypothetical protein WcibK1_04354 [Weissella cibaria KACC 11862]
          Length = 253

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F+ PR   R +   +DLG G GAV L  +      + VGV+I  +  ++A  +   N ++
Sbjct: 40  FAQPRKNGRGLN--VDLGAGNGAVSL-FMAHKVAGQIVGVEIQERLADMATRSVQMNDLT 96

Query: 148 ERFDTLQSDW---FSSVE-GLFDVIVSNPPY 174
           ++   +  D    F+ +  G  D++VSNPPY
Sbjct: 97  DKITIINKDMRDIFTDIRPGSADMVVSNPPY 127


>gi|284048009|ref|YP_003398348.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731]
 gi|283952230|gb|ADB47033.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+    + P + ++   ++L+LG GTGAV L LL      K +GVD++   +E+ + + 
Sbjct: 28  TDAVFLAAFPHLVRK--AKVLELGCGTGAVSL-LLANRGAEKVLGVDVNPHVVELFQRSI 84

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
             N + +R +    D     +GL     D++ +NPPY
Sbjct: 85  RDNHLEDRVEGRVCDLRDFRDGLPCDALDLVAANPPY 121


>gi|222529538|ref|YP_002573420.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|254782825|sp|B9MJY9|PRMA_ANATD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|222456385|gb|ACM60647.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 304

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 18/107 (16%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G + +A  K   F   + + VDI   A+++A+ NA  NGV    +  ++D  
Sbjct: 172 VLDVGTGSGILAIAAKK---FLARRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-----DPRISLDGGI 200
             +E  FDV+V+N      ++ D +    RD      D RI +  GI
Sbjct: 227 EGIEEKFDVVVAN------IVADIIMRLSRDVKKVLKDDRIFISSGI 267


>gi|254448299|ref|ZP_05061761.1| ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HTCC5015]
 gi|198262166|gb|EDY86449.1| ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HTCC5015]
          Length = 353

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +L+D+    S P   K+D   +LD   G G + L L +         VD+S  AL  A
Sbjct: 195 TRVLLDNL--HSTPLSIKKDAP-LLDFAAGAGPIALWLKRRYADLNITLVDVSAIALFCA 251

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             NA  N +       Q+D    V+G +  IVSNPP+   V  D
Sbjct: 252 WMNAQVNDME--VVCQQADGLQGVDGEWQAIVSNPPFHTGVETD 293


>gi|89071135|ref|ZP_01158333.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola
           granulosus HTCC2516]
 gi|89043320|gb|EAR49543.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola
           granulosus HTCC2516]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 76  PETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           PE ++ +++A       I ++ ++    R+LD+G G G + L L ++    + VGV +S 
Sbjct: 149 PEPDMSLEAAQEAKKRHIARKLLIEPGDRVLDIGCGWGGMALTLARDFG-ARVVGVTLSE 207

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +   IA+       +S+R D    D +  VEG F+ IVS
Sbjct: 208 EQHRIARERVAQAQLSDRIDIRLQD-YREVEGPFERIVS 245


>gi|117925507|ref|YP_866124.1| rRNA (guanine-N(2)-)-methyltransferase [Magnetococcus sp. MC-1]
 gi|229564333|sp|A0L9S5|RLMG_MAGSM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|117609263|gb|ABK44718.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Magnetococcus sp. MC-1]
          Length = 369

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++DLG G G + +A L+ +P    + VD S +A    + N       E F  +     S
Sbjct: 227 QVVDLGCGNGVLSIAALQRNPNSHVLAVDESWQATRSCQINLERVRTPEHFKVVWGHSLS 286

Query: 160 SVEGL-FDVIVSNPPY 174
            +EG+  D+++ NPP+
Sbjct: 287 FIEGMQADLVLCNPPF 302


>gi|296532806|ref|ZP_06895483.1| probable ribosomal protein L11 methyltransferase [Roseomonas
           cervicalis ATCC 49957]
 gi|296266867|gb|EFH12815.1| probable ribosomal protein L11 methyltransferase [Roseomonas
           cervicalis ATCC 49957]
          Length = 304

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   RILDLGTG+G + +A  K     K +  DI   ++ +A+ NA  NG+  +F  
Sbjct: 151 MAHRRPKRILDLGTGSGILAMAAAKRL-HRKVLATDIEPWSVRVAQDNANMNGLRNQFRA 209

Query: 153 LQSDWF---SSVEGLFDVIVSN 171
             +D +   S   G +D++ +N
Sbjct: 210 KLADGWKHRSVRAGTYDLVFAN 231


>gi|291544856|emb|CBL17965.1| RNA methyltransferase, RsmD family [Ruminococcus sp. 18P13]
          Length = 180

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 18/132 (13%)

Query: 75  RPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           RP T+ + +   SA+ F LP        ++LDL  G+G + +  L       GV VD S 
Sbjct: 22  RPTTDKVKEAMFSAIQFQLPG------AQVLDLFAGSGQLGIEALSRGAA-HGVFVDQSS 74

Query: 132 KALEIAKSNAVTNG---VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +++ + + N  T G   VS      Q D+  + +  FD+   +PPY + ++ + L +   
Sbjct: 75  RSIAVVRENLETTGFTDVSAVVLKSQMDFLRTTDQRFDIAFLDPPYGKGILEETLPVLSE 134

Query: 189 DFDPRISLDGGI 200
             +P     GGI
Sbjct: 135 YMNP-----GGI 141


>gi|281415516|ref|ZP_06247258.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
          Length = 558

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------- 145
           ++R V R LD+G G G   L LL  +        D+S +AL   + N + N         
Sbjct: 182 QRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALAFTRFNLLLNADVLGLDRE 239

Query: 146 -VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
            + +R      D  + V G  FD++VSNPP++
Sbjct: 240 RLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271


>gi|254823031|ref|ZP_05228032.1| hypothetical protein MintA_24089 [Mycobacterium intracellulare ATCC
           13950]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 15/82 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155
           +LDLG G GAV LA  K  P  + +GVD+     +  + +   +NAV  GV++R +   +
Sbjct: 93  VLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSRQATLANAVAEGVADRVEVRTA 152

Query: 156 DWFSSVEGL------FDVIVSN 171
           D    V  L       DV+VSN
Sbjct: 153 D----VTALPLADESVDVVVSN 170


>gi|206890120|ref|YP_002248963.1| methyltransferase small domain family [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742058|gb|ACI21115.1| methyltransferase small domain family [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----- 156
           LDL    GA  + L K        G+D S KA+EIAK NA+ N V ++   +++D     
Sbjct: 217 LDLFCYVGAWSIHLAKRGANI--TGIDSSEKAIEIAKQNAMLNNVQDKCRFIKADVFDYL 274

Query: 157 -WFSSVEGLFDVIVSNPP 173
            W +     +D IV +PP
Sbjct: 275 RWEAKKGKKYDFIVVDPP 292


>gi|163844183|ref|YP_001628588.1| methyltransferase small [Brucella suis ATCC 23445]
 gi|163674906|gb|ABY39017.1| methyltransferase small [Brucella suis ATCC 23445]
          Length = 340

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFYEGRVTD 282


>gi|300817648|ref|ZP_07097863.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300927048|ref|ZP_07142800.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1]
 gi|301330323|ref|ZP_07222970.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|309794371|ref|ZP_07688794.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|300416932|gb|EFK00243.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1]
 gi|300529636|gb|EFK50698.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300843657|gb|EFK71417.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|308121827|gb|EFO59089.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 219

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 19  VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 78

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              W +     FD+I+SNPPY +   V+C
Sbjct: 79  IQQWITQQTVRFDLIISNPPYYQQG-VEC 106


>gi|282865460|ref|ZP_06274511.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE]
 gi|282559504|gb|EFB65055.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE]
          Length = 264

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 57/140 (40%), Gaps = 21/140 (15%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   RI DLG G G V   L  + P  +  G D S + LE A+++A       R D  +
Sbjct: 33  PRPTPRIADLGCGAGNVTALLAADRPEARVTGYDNSTRMLEQARTHA-----GPRLDFAE 87

Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI-------SLDGGIDGLS 204
           +D   W    E  +D+IVSN   +   +    GL  R  D  +        + G  D  S
Sbjct: 88  ADVATW--EPEETYDLIVSN--ALLQWVPGHTGLFPRWLDALVPGGVLAFQVPGNFDAPS 143

Query: 205 H--YRTIADGVSRHLNKDGL 222
           H   R +AD    H    GL
Sbjct: 144 HTLLRELADSPRWHGTLGGL 163


>gi|157273446|gb|ABV27345.1| putative methyltransferase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 183

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 10/117 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP ++ + ++      PRI  +     LDL  G+GAV +  L      +   V+ S +AL
Sbjct: 22  RPTSDRMRETLFNILAPRISDKA---FLDLCAGSGAVGIEALSRGAA-RATFVERSRRAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGL 185
                N    G+ E  + +Q D  S+++        FD I  +PPY  S+    L L
Sbjct: 78  MALVENLARCGIGEEAEVIQRDAISAIKQFVQAGRRFDFIFCDPPYASSLYEPLLAL 134


>gi|115378992|ref|ZP_01466123.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|115363996|gb|EAU63100.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
          Length = 228

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTG+G + L L K     +  G+++  +   +A+ N   N   ++   +Q D   
Sbjct: 31  RLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNRCEQQVTLVQGDLRQ 90

Query: 160 S----VEGLFDVIVSNPPY 174
                  G F  ++ NPPY
Sbjct: 91  VSRLFAAGSFCHVLCNPPY 109


>gi|307129032|ref|YP_003881048.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii
           3937]
 gi|306526561|gb|ADM96491.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii
           3937]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLE 211


>gi|300361859|ref|ZP_07058036.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|300354478|gb|EFJ70349.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           JV-V03]
          Length = 315

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K     + +G DIS +A+  AK N   N + +  D  +++  
Sbjct: 179 MSVLDVGTGSGILAIAASKLGA-SQVLGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             ++  +D+IV+N      ++ D L   + D D  ++ +G +
Sbjct: 237 KDIDEKYDLIVAN------ILADILLELIPDLDSHLNENGKV 272


>gi|75910114|ref|YP_324410.1| hypothetical protein Ava_3910 [Anabaena variabilis ATCC 29413]
 gi|75703839|gb|ABA23515.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 219

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +++VD+ L  +  ++ K DV  + DLG+G G +     ++    +G G+DI+ + ++
Sbjct: 68  PTPQVVVDAMLQVA--QVGKNDV--LYDLGSGDGRIVNTAAQKF-GTRGTGIDINPERIQ 122

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            A  NA   GVS+R   +Q D F +
Sbjct: 123 EANENAQKAGVSDRVKFVQQDLFKT 147


>gi|170017258|ref|YP_001728177.1| Type I restriction-modification system, M subunit [Leuconostoc
           citreum KM20]
 gi|169804115|gb|ACA82733.1| Type I restriction-modification system, M subunit [Leuconostoc
           citreum KM20]
          Length = 531

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSE-- 148
           E R    I D   G+G++ L + +     K V   G +++     +A+ N + +GV +  
Sbjct: 213 EDRAPFHIYDPTMGSGSLMLNIRRYLSNPKQVHYHGQELNTTTYNLARMNLILHGVDQDR 272

Query: 149 ----RFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPTEEPHQFDAVVMNPPY 302


>gi|197119799|ref|YP_002140226.1| O-methyltransferase [Geobacter bemidjiensis Bem]
 gi|197089159|gb|ACH40430.1| O-methyltransferase, putative [Geobacter bemidjiensis Bem]
          Length = 258

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +DLGTG G + L L +         ++      +IA  N + NG+S+R + ++ D  S
Sbjct: 57  RCVDLGTGCGVIALLLARLGENASVAAIEFQQVMAQIAARNVMMNGLSDRVEVVEEDVVS 116

Query: 160 SVEGL----FDVIVSNPPY 174
                    FD++VSNPPY
Sbjct: 117 VKSRFLVDSFDLVVSNPPY 135


>gi|37681321|ref|NP_935930.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus YJ016]
 gi|38605128|sp|P60094|PRMA_VIBVY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|37200072|dbj|BAC95901.1| ribosomal protein L11 methylase [Vibrio vulnificus YJ016]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ D  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AEKVIGIDIDPQALLASKDNAQRNGVADQLDVYLPQD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLLADVVVAN 231


>gi|225554311|gb|EEH02611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 500

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 80/218 (36%), Gaps = 59/218 (27%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE--------LLVDSALAFS 89
           L   + R  +   +  ILG + F  + +        PRPETE        LL+       
Sbjct: 88  LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147

Query: 90  LPRIEKRD--------VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137
              +  RD         +RI+DL TGTG + L L        P  +  GVDIS +AL++A
Sbjct: 148 RKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISARALKLA 207

Query: 138 KSN-----------------------AVTNGVSERFDTLQSDWFSS-------------- 160
           + N                        V +G SE  +   S    S              
Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGNVLSGQSELSELYTSSVTPSSKTAAAAAAAAEPE 267

Query: 161 VEGLFDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196
           +  +  +++SNPPYI             VR ++P+++L
Sbjct: 268 INPVITILLSNPPYISPAQFANGTTARSVRRYEPKLAL 305


>gi|14521889|ref|NP_127366.1| hypothetical protein PAB1237 [Pyrococcus abyssi GE5]
 gi|5459109|emb|CAB50595.1| Hypothetical protein, Met-10+ like protein [Pyrococcus abyssi GE5]
          Length = 396

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LD+ T TG  A+  A+         + +D S +A+E AK NA  NGV ++   +    
Sbjct: 220 RVLDVFTYTGGFAIHAAIAGADEV---IAIDKSPRAIETAKENAKLNGVEDKIKFIVGSA 276

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E L      FDV++ +PP
Sbjct: 277 FEEMEKLQKKGEKFDVVILDPP 298


>gi|325688191|gb|EGD30210.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK72]
          Length = 182

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-MEEAVLVERDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE           V + D  + L   I GL 
Sbjct: 106 ALEILTGAFDLVLLDPPYAKEQIVADLEKLEESRLLSQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|322834711|ref|YP_004214738.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602]
 gi|321169912|gb|ADW75611.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602]
          Length = 294

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 28/138 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSD 156
           ++D G G+G + +A LK       VG+DI  +A++ ++ NA  NGVSER        Q D
Sbjct: 162 VIDFGCGSGILAIAALKLGAKHV-VGIDIDPQAIQASRDNAERNGVSERLSLYLPKDQPD 220

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGL-----SHYRT 208
             S+     DV+V+N           L   +R+  P IS   + GG  GL     S  ++
Sbjct: 221 NLSA-----DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLASQAQS 265

Query: 209 IADGVSRHLNKDGLCSVE 226
           +AD        D +   E
Sbjct: 266 VADAYKDQFELDPVAEKE 283


>gi|319782824|ref|YP_004142300.1| methyltransferase type 11 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317168712|gb|ADV12250.1| Methyltransferase type 11 [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 340

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145
           A  L  + KR    +LDLGTGTG +       SP ++ GVG+D+S + L +A++N    G
Sbjct: 142 AAMLKLVGKRPFQSMLDLGTGTGRLLEIF---SPLYRRGVGIDMSREMLTVARANLDKAG 198

Query: 146 VS 147
           VS
Sbjct: 199 VS 200


>gi|291533323|emb|CBL06436.1| RNA methyltransferase, RsmD family [Megamonas hypermegale ART12/1]
          Length = 190

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL +GTG + L  L        + VD S  ++   K NA    + ++   L++D F++
Sbjct: 45  VLDLFSGTGNLSLEALSRGANH-AIMVDCSLDSISTIKFNATHTKLIDKSTILKADVFAT 103

Query: 161 VEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           ++ L      FD+I  +PPY + + +  L + + ++ P ++ DG I
Sbjct: 104 IKKLHLKQTKFDIIFCDPPYHQDLCLKVLQM-LHEY-PLLTEDGII 147


>gi|226365309|ref|YP_002783092.1| hypothetical protein ROP_59000 [Rhodococcus opacus B4]
 gi|226243799|dbj|BAH54147.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 380

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR+  R    + DLG GTG + ++L +  P    +  D S  A+  A + A  NG+  R
Sbjct: 231 LPRVNPRARAAV-DLGCGTGILAVSLARLLPEVSVIATDQSSAAVASAAATARANGLDGR 289

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPY 174
             TL+ D  SS+     DV++ NPP+
Sbjct: 290 ISTLRDDAMSSLATDSQDVVLCNPPF 315


>gi|126654237|ref|ZP_01726031.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905]
 gi|126589295|gb|EAZ83452.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905]
          Length = 200

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 10/98 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +L+D   AF +P I+      I D+G G G + L++ K +P      +DI+ +A+ ++
Sbjct: 46  SRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAKANPDRTVCMMDINERAVALS 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173
           + NA  NGV +      SD  S V+   +   I++NPP
Sbjct: 99  QKNAQVNGV-QNVRIFVSDGLSMVDKDIEAAAILTNPP 135


>gi|85705712|ref|ZP_01036809.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217]
 gi|85669702|gb|EAQ24566.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217]
          Length = 257

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA S+P    R    +LDLG G+G   L +    P     G++I      +A+ N+ TNG
Sbjct: 39  LAASVP---ARAGQTLLDLGCGSGIAALCVAARVPGVSLAGLEIQPAYAVLARRNSATNG 95

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
           ++   D  + D       L    FD ++ NPPY +
Sbjct: 96  LA--LDVTEGDIADLPAELRARQFDHVIVNPPYFD 128


>gi|300901471|ref|ZP_07119554.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|300355109|gb|EFJ70979.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
          Length = 376

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
            I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++ 
Sbjct: 267 EIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNA 326

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ ++ NPP+
Sbjct: 327 LSGVEPFRFNAVLCNPPF 344


>gi|288930622|ref|YP_003434682.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
 gi|288892870|gb|ADC64407.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
          Length = 246

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 6/52 (11%)

Query: 97  DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           D +RILD+GTGTG  AV LA L        VG+DIS + L++A+  AV  GV
Sbjct: 42  DKMRILDVGTGTGFLAVILAELGHEV----VGIDISEEMLKVARRKAVDKGV 89


>gi|223939007|ref|ZP_03630892.1| methyltransferase small [bacterium Ellin514]
 gi|223892303|gb|EEF58779.1| methyltransferase small [bacterium Ellin514]
          Length = 288

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 15/131 (11%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             + LDLG+G G+V +      P  + V ++   +++ +A+ +A  NG+  R++    D+
Sbjct: 78  ACKALDLGSGIGSVGMIAAWRLPGAQFVTIEAQDESVRLARKSARFNGLEARYEIRHGDF 137

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDG-LSHYRTIAD 211
                   + LFD+++ +PPY        LG  +  D   +I+    + G +SHY  +A 
Sbjct: 138 RDPNILRDDELFDLVLGSPPYFP------LGSGIEGDHPQKIACRFEVRGDISHYCAMA- 190

Query: 212 GVSRHLNKDGL 222
             ++HL   G 
Sbjct: 191 --TKHLAPGGF 199


>gi|182435368|ref|YP_001823087.1| hypothetical protein SGR_1575 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463884|dbj|BAG18404.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 497

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +   LLK+  F + VGVD+S +AL IA      + + ER
Sbjct: 301 RVLDLGCGQGQLVQELLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 350


>gi|92118256|ref|YP_577985.1| ribosomal L11 methyltransferase [Nitrobacter hamburgensis X14]
 gi|91801150|gb|ABE63525.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 298

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 14/97 (14%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAK 138
           LL+D  L   +PR       R+LDLG GTG + +A  K     + V   DI  ++  +A+
Sbjct: 146 LLLDHVLRSKMPR-------RVLDLGAGTGVLAIAAAKA--LRRNVLASDIDPRSTIVAR 196

Query: 139 SNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171
            NAV NGV     ++ +  FS+        FD++++N
Sbjct: 197 ENAVLNGVGNLVWSICATGFSAPLFRARAPFDLVLAN 233


>gi|75907816|ref|YP_322112.1| hypothetical protein Ava_1594 [Anabaena variabilis ATCC 29413]
 gi|75701541|gb|ABA21217.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 461

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 32/46 (69%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +++ +  R++DLG G G +   LLK+S F +  GVD+S ++LEIA+
Sbjct: 276 LKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQ 321


>gi|323979005|gb|EGB74084.1| methyltransferase small domain-containing protein [Escherichia coli
           TW10509]
          Length = 378

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           ++DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 VVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|291531341|emb|CBK96926.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum
           70/3]
          Length = 449

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  E L  SA  F+ P+ +      +LDL  G G + L++ + +   K +GV+I  +A+E
Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
            AK NA+ NG++   + + +D   +   L       DVI+ +PP
Sbjct: 338 NAKQNALANGITN-CEFICADAAEAARILHSRNLRPDVIMVDPP 380


>gi|254413900|ref|ZP_05027669.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
 gi|196179497|gb|EDX74492.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
          Length = 292

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILDLG GTG+  L L +  P  + +G+D+S   L +A+  A   GV  ++   +++   
Sbjct: 103 RILDLGCGTGSTTLLLKQAFPEAEVIGLDLSPYMLVMAERKAKAAGVEIQWRHGKAEETG 162

Query: 160 SVEGLFDVIVSN------PPYIESVIV 180
             E  FD++ ++      PP +   I+
Sbjct: 163 LPEASFDLVTASLLFHETPPAVAKSIL 189


>gi|109896410|ref|YP_659665.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica
           T6c]
 gi|123361452|sp|Q15ZS7|RSMC_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|109698691|gb|ABG38611.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudoalteromonas atlantica
           T6c]
          Length = 343

 Score = 40.0 bits (92), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSN 140
           +D+     L  I++    RILD   G G + C A LK +P  + V  D+S  A+  ++ +
Sbjct: 188 LDTGTQLLLDNIDRVVSGRILDFACGAGIIGCFAGLK-NPQAQVVMSDVSALAIYCSQKS 246

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           A  NGV  +   + S+   ++ G F  + +NPP+   +  D
Sbjct: 247 AELNGVKAQ--VIPSNGLGALTGKFAQVFTNPPFHTGIKTD 285


>gi|310657890|ref|YP_003935611.1| hypothetical protein CLOST_0580 [Clostridium sticklandii DSM 519]
 gi|308824668|emb|CBH20706.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 570

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 20/146 (13%)

Query: 97  DVVRILDLGTGTGAVCLALL-----------KESPFFKG--VGVDISCKALEIAKSNAVT 143
           +  +ILD   G  +  +AL            K S F K   +G+DI   A+E+AK N   
Sbjct: 32  EAAKILDPCIGGASFDIALFQALEQEYIKSYKLSEFLKTNFIGIDIEASAIELAKENLKK 91

Query: 144 NGVS--ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGG 199
            G+S  +  +    D+ +   E  FD+I+ NPPYI       +  +VRD +  +   + G
Sbjct: 92  VGISYADNLNLKCKDYLTDFNEQGFDLIIGNPPYIGEKGNRAVFSKVRDTEFGKKYYEKG 151

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
           +D   ++    +     LN+DG+ ++
Sbjct: 152 MD---YFYFFIEKSLEILNEDGILAM 174


>gi|297562502|ref|YP_003681476.1| methyltransferase type 11 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846950|gb|ADH68970.1| Methyltransferase type 11 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 259

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 9/129 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQS 155
           +R+LDLG GTGA   ALL+  P  +   VD S   LE A++      VS    R + L  
Sbjct: 54  LRLLDLGCGTGASTAALLRALPRARIAAVDASPGMLEAARAKRWPESVSFHRARAEDLTP 113

Query: 156 DWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +W    V G  D +     +   +I +C   +      R  L  G   + H  ++AD VS
Sbjct: 114 EWARRHVGGPVDAV-----FGAYLIRNCPDPDALLASVRALLKPGGRVVLHEYSVADSVS 168

Query: 215 RHLNKDGLC 223
                  +C
Sbjct: 169 AQAVWSAVC 177


>gi|167750197|ref|ZP_02422324.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702]
 gi|167656759|gb|EDS00889.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702]
          Length = 493

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 14/104 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  E L  SA  F+ P+ +      +LDL  G G + L++ + +   K +GV+I  +A+E
Sbjct: 285 PCAEQLYSSACDFAEPKGKT-----VLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIE 337

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
            AK NA+ NG++   + + +D   +   L       DVI+ +PP
Sbjct: 338 NAKQNALANGIT-NCEFICADAAEAARILHSRNLRPDVIMVDPP 380


>gi|119498171|ref|XP_001265843.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Neosartorya fischeri NRRL 181]
 gi|119414007|gb|EAW23946.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Neosartorya fischeri NRRL 181]
          Length = 357

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 3/47 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           E+R    ILDLGTG G++ LALL++   F+G  VGVD S +++E+A+
Sbjct: 117 ERRRQPSILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162


>gi|289582957|ref|YP_003481423.1| methyltransferase type 11 [Natrialba magadii ATCC 43099]
 gi|289532510|gb|ADD06861.1| Methyltransferase type 11 [Natrialba magadii ATCC 43099]
          Length = 209

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +LDLGTGTGA+ LAL  ++   + VG DIS   +E A S A   G+ 
Sbjct: 46  VLDLGTGTGAIALALAPDAE--RVVGRDISEGMMEEAASKAADQGIE 90


>gi|56418563|ref|YP_145881.1| hypothetical protein GK0028 [Geobacillus kaustophilus HTA426]
 gi|56378405|dbj|BAD74313.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 248

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +I+DL TG G + L L + +   KG  +G++I  +  ++A+ +   NG+  + + +  D 
Sbjct: 47  QIVDLCTGNGVIPLLLSRRT---KGTIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDI 103

Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183
             + + +    +DV+  NPPY  +V  D L
Sbjct: 104 KEAPQRIGYSRYDVVTCNPPYFPAVGKDEL 133


>gi|260060773|ref|YP_003193853.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
 gi|88784903|gb|EAR16072.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
          Length = 237

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 18/152 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           ++LD+G+G G + L L +  P      V++   A      N   +  ++R       W  
Sbjct: 40  QLLDVGSGNGLLGLMLAQRCPSGDIEAVEVDPGAYVCCVENFEASPWADRLFCYHCSWEE 99

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGV 213
             +   G +D+I+SNPP+           +V   +P   R   +  +     + ++ +GV
Sbjct: 100 FVAESAGPYDMIISNPPFHPE--------QVSSHEPARERARREASLP----FNSLLEGV 147

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            R L + GL SV + +  + D  ++  +  L+
Sbjct: 148 DRLLAEQGLFSVVVPFASEADFTKLAAALGLY 179


>gi|332706038|ref|ZP_08426110.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332355130|gb|EGJ34598.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 111

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 28/50 (56%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L  IE  +   +LDLG GTG +   L +E P  +G GVD+S K L  A+ 
Sbjct: 37  LEYIELTNQPNVLDLGCGTGRLLNRLAQEFPNLRGTGVDLSTKMLAQARQ 86


>gi|322392309|ref|ZP_08065770.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus peroris ATCC 700780]
 gi|321144844|gb|EFX40244.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus peroris ATCC 700780]
          Length = 533

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E ++   I D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-ENQEGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|311900508|dbj|BAJ32916.1| putative methyltransferase [Kitasatospora setae KM-6054]
          Length = 300

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 77  ETELLVD--SALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           + E+L D  +A+ + LP   E R V   LDLG GTGA   ALL   P  +   VD S   
Sbjct: 44  DAEVLADHLAAIIYWLPLDAEPRHV---LDLGAGTGAGTFALLHRFPTARVTAVDASPGH 100

Query: 134 LEIAKSNAVTNGVSERFDTLQSD 156
           L   +  A   G+++R  T+Q+D
Sbjct: 101 LLRLREKAHALGLADRVATVQAD 123


>gi|312902060|ref|ZP_07761321.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0470]
 gi|311290842|gb|EFQ69398.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0470]
          Length = 529

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++     +AK N + +GV    
Sbjct: 215 EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTYNLAKMNLILHGVEAED 274

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|311031619|ref|ZP_07709709.1| ribosomal protein L11 methyltransferase [Bacillus sp. m3-13]
          Length = 313

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 26/139 (18%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAFS----------LPRIEK- 95
            W+ +YN         +  + +T+EP    E ++  D  +AF           +  IE+ 
Sbjct: 113 AWKKYYNPVKISEKFTIVPTWETYEPVSSDEKIIELDPGMAFGTGTHPTTVLCIQAIERT 172

Query: 96  -RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            +   +++D+GTG+G  ++  A+L          +D+   A+E AK N   N V      
Sbjct: 173 VKPQDKVIDVGTGSGVLSIAAAMLDAKEVL---ALDLDDVAVESAKLNIKLNKVHPTVTV 229

Query: 153 LQSDWFSSVEGLFDVIVSN 171
            Q++   +VEG  DV+V+N
Sbjct: 230 KQNNLLKNVEGPVDVVVAN 248


>gi|310821604|ref|YP_003953962.1| ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
           aurantiaca DW4/3-1]
 gi|309394676|gb|ADO72135.1| Ubiquinone/menaquinone biosynthesis methyltransferase [Stigmatella
           aurantiaca DW4/3-1]
          Length = 244

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +E +   R+LDL TGTG + L +LK  P    VG+D S   +EI +      G+S +
Sbjct: 52  LELKPGYRVLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAK 108


>gi|114706082|ref|ZP_01438985.1| hypothetical protein FP2506_16489 [Fulvimarina pelagi HTCC2506]
 gi|114538928|gb|EAU42049.1| hypothetical protein FP2506_16489 [Fulvimarina pelagi HTCC2506]
          Length = 115

 Score = 40.0 bits (92), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            RIL +G GTGA  L+L +  P +  VGVD S + L+I  ++    GVS+R D
Sbjct: 59  ARILCVGAGTGAEILSLARAYPTWSFVGVDPSAEMLKICGASLNDAGVSDRCD 111


>gi|145241390|ref|XP_001393341.1| arsenite methyltransferase [Aspergillus niger CBS 513.88]
 gi|134077878|emb|CAK40104.1| unnamed protein product [Aspergillus niger]
          Length = 290

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            +S  AF LP +   D   ILD+G G G + +   + +   +  G+DIS   L  AKS A
Sbjct: 27  AESEAAFLLPHLRTTDY--ILDVGCGPGTITIGFTRYATKGRTTGIDISPDVLRKAKSMA 84

Query: 142 VTNGVSERFD 151
              G S +++
Sbjct: 85  AEAGCSMKWE 94


>gi|24376235|ref|NP_720343.1| type II DNA modification methyltransferase [Shewanella oneidensis
           MR-1]
 gi|24344700|gb|AAN52943.1| type II DNA modification methyltransferase, subtype gamma
           [Shewanella oneidensis MR-1]
          Length = 570

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 21/140 (15%)

Query: 101 ILDLGTGTGAVCLALLKE---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           I D   G G + L+ L     +   + +G DI+ +++E++K   +    + R + +  D+
Sbjct: 54  IADPAIGDGELILSFLSSLDSTDNIEVIGFDINLESIELSKKRILNFYPNVRINLIHGDY 113

Query: 158 FS-SVEG----------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSH 205
               + G           FD I++NPPY+ + +   LG E   F   +S + G+ G +  
Sbjct: 114 LDYCINGNSDLCEYKLPKFDAIIANPPYVRTQV---LGAEQSQF---LSKNFGLKGRVDI 167

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y+    G+S+ L++DG+  V
Sbjct: 168 YQAFLIGMSKCLSEDGVAGV 187


>gi|113474245|ref|YP_720306.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110165293|gb|ABG49833.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 211

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++ ++ R ++ ++   +   +  +I+ +   +ILD+  GTG     LLK++P  + +G+D
Sbjct: 14  ANIYDWRWQSYIMNTLSFLHTWEQIDPQ--AKILDVACGTGEFERLLLKKNPTQRIIGID 71

Query: 129 ISCKALEIAKSNAVTNGVSE 148
           IS K L IA+    TN   E
Sbjct: 72  ISEKMLNIARKKYQTNSNVE 91


>gi|305681483|ref|ZP_07404290.1| methyltransferase small domain protein [Corynebacterium matruchotii
           ATCC 14266]
 gi|305659688|gb|EFM49188.1| methyltransferase small domain protein [Corynebacterium matruchotii
           ATCC 14266]
          Length = 530

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 84  SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            A + SL R+  R  V   LDLG G+G   LA L  +   +    D+  +AL++A++   
Sbjct: 161 GAASLSLLRMTCRTPVDSALDLGAGSGVQALAQLGCA--SQVTLTDVHPRALDMAEATLA 218

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
             G   + + L+  WF  V G  FD IV+NPP++
Sbjct: 219 AAGALPQAELLEGSWFEPVAGRTFDRIVANPPFV 252


>gi|239982975|ref|ZP_04705499.1| hypothetical protein SalbJ_26314 [Streptomyces albus J1074]
 gi|291454809|ref|ZP_06594199.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291357758|gb|EFE84660.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 512

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 30/45 (66%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + +    R+LDLG G G +  ALLK++ + + VG+D+S +AL +A
Sbjct: 293 LARAGAARVLDLGCGQGQLVQALLKDARYTEIVGLDVSVRALAVA 337


>gi|239926646|ref|ZP_04683599.1| modification methylase, HemK family protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291434962|ref|ZP_06574352.1| modification methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291337857|gb|EFE64813.1| modification methylase [Streptomyces ghanaensis ATCC 14672]
          Length = 114

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + ++G  D++ +NPPY+   +V  +  E     P  ++  G DGL+  R +    +R
Sbjct: 5   DLLAELDGTVDLVTANPPYVPERLV--IPAEWSVHQPAQAIYSGWDGLTVPRAVVATAAR 62

Query: 216 HLNKDGLCSVEIGYNQKVD-VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            L   G+ ++E  Y+  VD +V +  S     V +  D+ G  R ++  R
Sbjct: 63  LLKDGGVLAME-HYDAIVDEIVELVRSAGFESVTSHVDHDGFPRYVIARR 111


>gi|210608457|ref|ZP_03287833.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787]
 gi|210153033|gb|EEA84039.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787]
          Length = 546

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 10/78 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           + DL +GTG +   L   +P  K V GV+I  +A+E AK NA  NG+S  RF  +  D F
Sbjct: 314 VFDLFSGTGTIAQVL---APVAKQVIGVEIVEEAVEAAKENAEHNGLSNCRF--IAGDVF 368

Query: 159 S---SVEGLFDVIVSNPP 173
                +E   DVIV +PP
Sbjct: 369 KVLDEIEEKPDVIVLDPP 386


>gi|160901890|ref|YP_001567471.1| RNA methyltransferase [Petrotoga mobilis SJ95]
 gi|160359534|gb|ABX31148.1| RNA methyltransferase, TrmA family [Petrotoga mobilis SJ95]
          Length = 387

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 8/70 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE+L  +AL+++    E  DVV   D  +GTG + L L  ++   K  G++I  +A+E A
Sbjct: 227 TEVLYQTALSYA----ENSDVV--YDFYSGTGTISLLLANKAK--KVYGIEIIKEAVEAA 278

Query: 138 KSNAVTNGVS 147
           K NA+ N ++
Sbjct: 279 KQNAILNNIN 288


>gi|115380548|ref|ZP_01467510.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Stigmatella aurantiaca DW4/3-1]
 gi|115362449|gb|EAU61722.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Stigmatella aurantiaca DW4/3-1]
          Length = 260

 Score = 40.0 bits (92), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 31/57 (54%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +E +   R+LDL TGTG + L +LK  P    VG+D S   +EI +      G+S +
Sbjct: 68  LELKPGYRVLDLATGTGDLALKVLKHHPEGTVVGLDPSEGMMEIGRKKVAEEGLSAK 124


>gi|229105723|ref|ZP_04236352.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-28]
 gi|228677612|gb|EEL31860.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-28]
          Length = 497

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K ++  + D   G+G++ L + KE+  +K  G +       +A+ N + + +  +RFD  
Sbjct: 204 KSEIRSVYDGTCGSGSLLLRVGKEAKVYKYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 263

Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174
            +D     + L   F+ IV+NPPY
Sbjct: 264 NADTLEEPQHLDERFEAIVANPPY 287


>gi|238854674|ref|ZP_04645004.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           269-3]
 gi|260664383|ref|ZP_05865235.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932935|ref|ZP_06338332.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
 gi|238832464|gb|EEQ24771.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           269-3]
 gi|260561448|gb|EEX27420.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281302970|gb|EFA95175.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
          Length = 314

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 25/152 (16%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136
           T  LV  AL  SL +      V++LD+GTG+G + +A  K     K V   DIS +A+  
Sbjct: 162 TTQLVMMALERSLTK-----PVKVLDVGTGSGILAIAASKLGA--KSVLATDISDEAVTA 214

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N   N ++   + ++++    V+G FD+I++N      ++ + L   + D D  ++ 
Sbjct: 215 ANENIALNKLN-NIEVIKANLLKDVDGKFDLILAN------ILAEILFDLIPDLDKHLAP 267

Query: 197 DG-----GIDGLSHYRTIADGVSRHLNKDGLC 223
           +G     GID L      A+ V + L  +G  
Sbjct: 268 NGKVIFSGIDYLQ-----AEKVKQRLADNGFS 294


>gi|167565996|ref|ZP_02358912.1| hypothetical protein BoklE_25784 [Burkholderia oklahomensis EO147]
          Length = 329

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A   AK  A  NG +ER + L     S +E    +  ++  +   V+ D L  E R  
Sbjct: 186 ETATAQAKQAAEANGFAERLEFLHRPIQSLIEDPTPLKGADVVHAGFVMHDLLPAEERTL 245

Query: 191 D 191
           D
Sbjct: 246 D 246


>gi|315443843|ref|YP_004076722.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium sp. Spyr1]
 gi|315262146|gb|ADT98887.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium sp. Spyr1]
          Length = 206

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G   L L +    ++ VGVDIS  AL  A   A   G+++R    Q+D  +
Sbjct: 38  RALDLGCGEGGDTLWLAEHG--WEVVGVDISDTALRRAAEEADKRGLADRVQLRQTDLSA 95

Query: 160 SV-EGLFDVIVSNPPYIESVI 179
           S  +G+FD++ +   +++S++
Sbjct: 96  SFPDGVFDLVSAQ--FLQSMV 114


>gi|257095671|ref|YP_003169312.1| 50S ribosomal protein L11 methyltransferase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048195|gb|ACV37383.1| ribosomal protein L11 methyltransferase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 296

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 18/111 (16%)

Query: 74  PRPETELLV-DSALAF---SLPRIE------KRDV---VRILDLGTGTGAVCLALLKESP 120
           P PE  +LV D  +AF   S P         +R V   + +LD G G+G + +A  +   
Sbjct: 128 PDPEAMVLVLDPGMAFGTGSHPTTRLCLEWLERSVTPGLSVLDYGCGSGILAIASARLG- 186

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + VGVDI  +A+  ++SNA  NGVS RF     +    + G FD++V+N
Sbjct: 187 AAEVVGVDIDEQAVIASRSNAERNGVSARFQGSGRE----LNGQFDLVVAN 233


>gi|261417528|ref|YP_003251210.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|297528403|ref|YP_003669678.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|319765185|ref|YP_004130686.1| methyltransferase small [Geobacillus sp. Y412MC52]
 gi|261373985|gb|ACX76728.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|297251655|gb|ADI25101.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|317110051|gb|ADU92543.1| methyltransferase small [Geobacillus sp. Y412MC52]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +I+DL TG G + L L + +   KG  +G++I  +  ++A+ +   NG+  + + +  D 
Sbjct: 48  QIVDLCTGNGVIPLLLSRRT---KGTIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDI 104

Query: 158 FSSVEGL----FDVIVSNPPYIESVIVDCL 183
             + + +    +DV+  NPPY  +V  D L
Sbjct: 105 KEAPQRIGYSRYDVVTCNPPYFPAVGKDEL 134


>gi|134293400|ref|YP_001117136.1| methyltransferase type 11 [Burkholderia vietnamiensis G4]
 gi|134136557|gb|ABO57671.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4]
          Length = 283

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD+G GTGAV LA+ +  +   +  GVDIS + +  A+  A  +GV+  F    +    
Sbjct: 53  VLDVGCGTGAVTLAIARRLAKDAQCTGVDISARMIAAARERAERDGVAAEFVHADAQTHP 112

Query: 160 SVEGLFDVIVS 170
                FD+IVS
Sbjct: 113 FARERFDLIVS 123


>gi|282862493|ref|ZP_06271555.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
 gi|282562832|gb|EFB68372.1| Methyltransferase type 11 [Streptomyces sp. ACTE]
          Length = 237

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LDLG GTGA   ALL+ +P  +    D S   LE A++    + V  RF    ++  
Sbjct: 50  LRVLDLGCGTGASTRALLRAAPHARITAADASAGMLERARAKRWPSNV--RFLHRSAEAL 107

Query: 159 SSV--EGLFDVIVS 170
           +S   +G++D + +
Sbjct: 108 ASAGHDGVYDAVFA 121


>gi|261212266|ref|ZP_05926552.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341]
 gi|260838874|gb|EEX65525.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341]
          Length = 340

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   + N +S R     SD  S
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPEIELEMTDISALAIRSSQETLIANQLSGR--VYPSDMLS 260

Query: 160 SVEGLFDVIVSNPPY 174
           +V   +  IV+NPP+
Sbjct: 261 NVGSQYHYIVTNPPF 275


>gi|227508544|ref|ZP_03938593.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227191876|gb|EEI71943.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 532

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            L  + + +V  + D   G+G++ L +   +   +  G +++     +A+ N + +G++ 
Sbjct: 216 QLVTLNREEVRTVYDPTMGSGSLLLRVGDYAKVAEYYGQELNGTTYNLARMNMLMHGINY 275

Query: 148 ERFD-----TLQSDWFSSVEGLFDVIVSNPPY 174
            RFD     TL++D F   E  FD +V+NPPY
Sbjct: 276 SRFDLRQGDTLENDQFP--ERTFDAVVANPPY 305


>gi|302383414|ref|YP_003819237.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264]
 gi|302194042|gb|ADL01614.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264]
          Length = 254

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+ G G GAV   +    P     GV+    A+ +   N   N + +R   +Q+D   
Sbjct: 52  RVLEAGCGVGAVLTQIAARRPGVVVTGVERDPAAVALGACNVGLNALQDRMAVVQADVAG 111

Query: 160 SVEGL----FDVIVSNPPYIE 176
               L    FD  VSNPP+ +
Sbjct: 112 GFAALGRERFDWAVSNPPFFD 132


>gi|227510763|ref|ZP_03940812.1| type I site-specific deoxyribonuclease [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227189765|gb|EEI69832.1| type I site-specific deoxyribonuclease [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 540

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 96  RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           + V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS     
Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPSLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
               DTL  DW      LFD +V NPPY
Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|227523728|ref|ZP_03953777.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Lactobacillus hilgardii ATCC 8290]
 gi|227089043|gb|EEI24355.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Lactobacillus hilgardii ATCC 8290]
          Length = 532

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            L  + + +V  + D   G+G++ L +   +   +  G +++     +A+ N + +G++ 
Sbjct: 216 QLVTLNREEVRTVYDPTMGSGSLLLRVGDYAKVAEYYGQELNGTTYNLARMNMLMHGINY 275

Query: 148 ERFD-----TLQSDWFSSVEGLFDVIVSNPPY 174
            RFD     TL++D F   E  FD +V+NPPY
Sbjct: 276 SRFDLRQGDTLENDQFP--ERTFDAVVANPPY 305


>gi|116671900|ref|YP_832833.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116612009|gb|ABK04733.1| methyltransferase small [Arthrobacter sp. FB24]
          Length = 547

 Score = 40.0 bits (92), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 20/95 (21%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145
           +R V R LDLGTG G     LL  +        DIS +AL   + N + N          
Sbjct: 187 RRQVPRALDLGTGCGIQTFHLLHHADHV--TATDISARALAFTRFNLLLNAGALGIDPAT 244

Query: 146 ----VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
               VS R  +L       V G  FD++VSNPP++
Sbjct: 245 PEDRVSLRLGSL----LEPVAGEAFDLVVSNPPFV 275


>gi|284052982|ref|ZP_06383192.1| methyltransferase type 11 [Arthrospira platensis str. Paraca]
 gi|291571130|dbj|BAI93402.1| putative methyltransferase [Arthrospira platensis NIES-39]
          Length = 289

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           RILDLG GTG+  L L +  P  + +G+D+S   L +A++ A   G+  +F
Sbjct: 102 RILDLGCGTGSTTLLLKQTFPNAEVIGLDLSPYMLAVAETKAKQAGLDIKF 152


>gi|254506473|ref|ZP_05118615.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           16]
 gi|219550647|gb|EED27630.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           16]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +          EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231


>gi|50955207|ref|YP_062495.1| hypothetical protein Lxx15950 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951689|gb|AAT89390.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 203

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + LDLG G G + L L  ESP      VD++ +AL++ + NA   G+ +  + +  D   
Sbjct: 63  QFLDLGCGWGPLALTLALESPHATVWAVDVNTRALDVVRRNAEKLGL-KNVNPVTPD--R 119

Query: 160 SVEGL-FDVIVSNPP 173
             +GL F  I SNPP
Sbjct: 120 VPDGLEFTTIWSNPP 134


>gi|17229012|ref|NP_485560.1| hypothetical protein alr1520 [Nostoc sp. PCC 7120]
 gi|17135340|dbj|BAB77886.1| alr1520 [Nostoc sp. PCC 7120]
          Length = 219

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  + +VD+ L  +  ++ K DV  + DLG+G G +     ++    +G+G+DI+ + ++
Sbjct: 68  PTPQPVVDAMLQVA--QVGKNDV--LYDLGSGDGRIVNTAAQKF-GTRGIGIDINPERIQ 122

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            A  NA   GVS+R   +Q D F +
Sbjct: 123 EANENAQKAGVSDRVKFVQQDLFKT 147


>gi|312622232|ref|YP_004023845.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202699|gb|ADQ46026.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 306

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 26/136 (19%)

Query: 57  WRDFY------NVRLTLSSDTFEPR-PETELLVDSALAFS----------LPRIEK--RD 97
           W+ +Y      N+ +  S + ++    +T + +D  +AF           L  I+K  + 
Sbjct: 109 WKKYYKPVEIGNIVIVPSWEDYKAEDSKTIVWLDPGMAFGTGTHESTILCLEAIQKYVKP 168

Query: 98  VVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            + +LD+GTG+G + +A  K   F   + + VDI   A+++A+ NA  NGV    +  ++
Sbjct: 169 GMDVLDVGTGSGILAIAAKK---FLARRVLAVDIDEVAVKVAEENARLNGV--EIEIKKN 223

Query: 156 DWFSSVEGLFDVIVSN 171
           D    +E  FDV+++N
Sbjct: 224 DLVEGIEEKFDVVIAN 239


>gi|229817998|ref|ZP_04448280.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM
           20098]
 gi|229784602|gb|EEP20716.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM
           20098]
          Length = 211

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 11/106 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDT---- 152
           +LDLG G G + L+L   SP      +D++ +ALE+   NA  NG       R D     
Sbjct: 62  LLDLGCGWGPIALSLAMASPEANVWALDVNERALELTALNAKRNGCGNVRTVRTDADALP 121

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           ++ D  S  +  FD I SNPP    +  + L   + ++ PR+S  G
Sbjct: 122 VEPDAISP-DLTFDAIWSNPPI--RIGKEALHTLLMNWLPRLSDTG 164


>gi|225021251|ref|ZP_03710443.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945984|gb|EEG27193.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 530

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 84  SALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            A + SL R+  R  V   LDLG G+G   LA L  +   +    D+  +AL++A++   
Sbjct: 161 GAASLSLLRMTCRTPVDSALDLGAGSGVQALAQLGCA--SQVTLTDVHPRALDMAEATLA 218

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
             G   + + L+  WF  V G  FD IV+NPP++
Sbjct: 219 AAGALPQTELLEGSWFEPVAGRTFDRIVANPPFV 252


>gi|209526553|ref|ZP_03275079.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209493059|gb|EDZ93388.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 289

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           RILDLG GTG+  L L +  P  + +G+D+S   L +A++ A   G+  +F
Sbjct: 102 RILDLGCGTGSTTLLLKQTFPNAEVIGLDLSPYMLAVAETKAKQAGLDIKF 152


>gi|52081093|ref|YP_079884.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|52786472|ref|YP_092301.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|319644949|ref|ZP_07999182.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2]
 gi|81825250|sp|Q65H56|PRMA_BACLD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52004304|gb|AAU24246.1| Ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|52348974|gb|AAU41608.1| YqeT [Bacillus licheniformis ATCC 14580]
 gi|317392758|gb|EFV73552.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2]
          Length = 311

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 5/73 (6%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++D+GTGTG  ++  A+L+        G D+   A+E A+ N+  N VS+  +  Q++  
Sbjct: 179 VVDVGTGTGILSIASAMLRAKQVE---GYDLDPVAVESARLNSKLNKVSDHIEIKQNNLL 235

Query: 159 SSVEGLFDVIVSN 171
             VEG  D+IV+N
Sbjct: 236 DGVEGEKDIIVAN 248


>gi|297580750|ref|ZP_06942676.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535166|gb|EFH74001.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 340

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|262392969|ref|YP_003284823.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25]
 gi|262336563|gb|ACY50358.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25]
          Length = 295

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLIADVVVAN 231


>gi|258645194|ref|ZP_05732663.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470]
 gi|260402543|gb|EEW96090.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470]
          Length = 249

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 10/123 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS LA     I K+D  RI DLGTGTG + L LL           +I+    ++A+ N 
Sbjct: 33  LDSILAAHYVSIRKKD--RIADLGTGTGVIAL-LLSALGGEDITAFEINPVMADLARRNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
             N  S+    ++ D  +  +    G F+ +V NPPY E     +  C G+    ++  +
Sbjct: 90  NGNNKSDCIKVVEYDCRNVKKIYPTGSFNSVVVNPPYREIGTGRMNHCEGVASASYELNV 149

Query: 195 SLD 197
           +L+
Sbjct: 150 TLE 152


>gi|220908397|ref|YP_002483708.1| Histone methylation DOT1 family protein [Cyanothece sp. PCC 7425]
 gi|219865008|gb|ACL45347.1| Histone methylation DOT1 family protein [Cyanothece sp. PCC 7425]
          Length = 207

 Score = 40.0 bits (92), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG+G G V + +  +    +GVGVDI  + ++ AK NA   GVS+R   +Q D F +
Sbjct: 78  VYDLGSGDGRVVI-IAAQKYGARGVGVDIDPQRIQEAKVNAQRAGVSDRVRFIQQDLFQT 136


>gi|319789216|ref|YP_004150849.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1]
 gi|317113718|gb|ADU96208.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 6/55 (10%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           V VD S  AL++A+ NA  NGV E+F  ++ D F  ++ +      FD IV +PP
Sbjct: 247 VAVDSSQLALDLARENAALNGVEEKFTFVKGDAFKVLKEMSLWGEKFDSIVIDPP 301


>gi|223982933|ref|ZP_03633145.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM
           12042]
 gi|223965094|gb|EEF69394.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM
           12042]
          Length = 402

 Score = 40.0 bits (92), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  + TG   L A L  +     V VD+S  AL+  ++NAV N + +R   +++D F
Sbjct: 230 RVLDCFSHTGGFALNAALGNAQSV--VAVDVSQTALDQGRANAVLNHLEDRIQFVKADVF 287

Query: 159 SSVE----GLFDVIVSNPP 173
             ++    G +D+IV +PP
Sbjct: 288 EYLDRCAMGQYDIIVLDPP 306


>gi|145223482|ref|YP_001134160.1| methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
 gi|145215968|gb|ABP45372.1| Methyltransferase type 11 [Mycobacterium gilvum PYR-GCK]
          Length = 206

 Score = 40.0 bits (92), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G   L L +    ++ VGVDIS  AL  A   A   G+++R    Q+D  +
Sbjct: 38  RALDLGCGEGGDTLWLAEHG--WEVVGVDISDTALRRAAEEADKRGLADRVQLRQTDLSA 95

Query: 160 SV-EGLFDVIVSNPPYIESVI 179
           S  +G+FD++ +   +++S++
Sbjct: 96  SFPDGVFDLVSAQ--FLQSMV 114


>gi|297617814|ref|YP_003702973.1| ribosomal protein L11 methyltransferase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145651|gb|ADI02408.1| ribosomal protein L11 methyltransferase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 308

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)

Query: 57  WRDFYNV-----RLTL--SSDTFEPRP-ETELLVDSALAFS----------LPRIEK--- 95
           W+ +Y+      RL +  S + +   P E  + +D  +AF           L  IEK   
Sbjct: 109 WKSYYHSLKIGKRLVIKPSWEDYRAEPGEVVIEIDPGMAFGTGTHATTRFCLELIEKYVS 168

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D+  ++D+GTG+G + +A  K     + + +D+   A+++AK N   NGV E+ +    
Sbjct: 169 KDMT-LIDIGTGSGILAIAAAKLGAR-RIIALDLDPVAVQVAKENVARNGVEEQVEVWNL 226

Query: 156 DWFSSVEGLFDVIVSN 171
           D+    E   D+IV N
Sbjct: 227 DFREMPETRADLIVGN 242


>gi|284044885|ref|YP_003395225.1| methyltransferase type 11 [Conexibacter woesei DSM 14684]
 gi|283949106|gb|ADB51850.1| Methyltransferase type 11 [Conexibacter woesei DSM 14684]
          Length = 255

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R+E R    +LDLG GTG +  ALL+  P  + V VD S   +E A++     G   R
Sbjct: 26  LDRLELRGEETVLDLGCGTGRITRALLERLPAGRVVAVDGSAAMVERARAELA--GAGTR 83

Query: 150 FDTLQSD 156
              +QSD
Sbjct: 84  ATVIQSD 90


>gi|253581068|ref|ZP_04858328.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847604|gb|EES75574.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39BFAA]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +++K +    LDLGTGTG + + L  ++      G++I  +  ++A  + 
Sbjct: 32  MDAVLLSGFAKVKKGETA--LDLGTGTGIIPILLKTKTNGKHFTGLEIQKECADMAGRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
             N + +  + ++ D   + +      FDV+ SNPPY+
Sbjct: 90  RYNHLEDDVEIVRGDIKEAADIFGAASFDVVTSNPPYM 127


>gi|291326559|ref|ZP_06124994.2| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM
           1131]
 gi|291313550|gb|EFE54003.1| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM
           1131]
          Length = 319

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A+  ++ NA  NGVSER    L  D  +
Sbjct: 187 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAITASRDNAQRNGVSERLSLYLPKDQPN 245

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            ++   DV+V+N           L   +R+  P IS+
Sbjct: 246 DLQA--DVVVAN----------ILAGPLRELAPMISV 270


>gi|224367223|ref|YP_002601386.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family
           protein) [Desulfobacterium autotrophicum HRM2]
 gi|223689939|gb|ACN13222.1| two domain fusion protein (N:methyltransferase, C:TPR-repeat family
           protein) [Desulfobacterium autotrophicum HRM2]
          Length = 450

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTN 144
           L F L R    + + ILD+G GTG   L      PF K + GVD+S K LE A    + N
Sbjct: 278 LLFDLVRPYLTEQLNILDIGCGTG---LGAKLYQPFAKSLTGVDVSSKMLEKAAEKKLYN 334

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSN 171
            + E FD LQ DW  +    FD+I S+
Sbjct: 335 RL-EVFDILQ-DW--TFPKKFDLIYSS 357


>gi|72163488|ref|YP_291145.1| methyltransferase [Thermobifida fusca YX]
 gi|71917220|gb|AAZ57122.1| putative methyltransferase [Thermobifida fusca YX]
          Length = 241

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           SA    LPR  K   +RILDLG GTGA   ALL  +P    + VD S   L +A+     
Sbjct: 39  SAARLRLPR--KGAGLRILDLGCGTGASTAALLHVAPHADILAVDASVGMLAVARRKTWP 96

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + V  +F   +++  + + G FD + +
Sbjct: 97  DNV--QFHHARAETLAGI-GPFDAVFA 120


>gi|229512885|ref|ZP_04402352.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
 gi|229350134|gb|EEO15087.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|212544756|ref|XP_002152532.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210065501|gb|EEA19595.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 339

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 44/205 (21%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV---------RLTLS 68
           S +  IVD  S  DDR       + +++ K+E+  R   +RD   +         RL L 
Sbjct: 28  SDNSDIVDTSSTFDDRTTIV---SSIKNYKYENGRRYHSFRDGEYLLPNDEREQERLDLL 84

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             TF       LL++  L     R    + VR+LD GTGTG   +   +E+P  + +G D
Sbjct: 85  HHTFR------LLLNGELY----RAPLSNPVRVLDFGTGTGVWAIDFAEENPRTEVLGTD 134

Query: 129 ISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI--------VSNPPYIESV 178
           +S        SN        RF  D ++S+W    +  FD I        + +   + + 
Sbjct: 135 LSPIQPSWFPSNC-------RFEVDDVESEWLYGYQS-FDYIHCRGMTGSIRDWQKLFAQ 186

Query: 179 IVDCL----GLEVRDFDPRISLDGG 199
            VD L     +EV++++  IS D G
Sbjct: 187 AVDNLQPGGWMEVQEYEIEISSDDG 211


>gi|157693045|ref|YP_001487507.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032]
 gi|166989894|sp|A8FFD0|PRMA_BACP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157681803|gb|ABV62947.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032]
          Length = 311

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 34/143 (23%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92
            W+ +Y+         +  + + + P    EL++  D  +AF             +L R 
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHSDELIIEMDPGMAFGTGTHPTTVLCIQALERY 172

Query: 93  IEKRDVVRILDLGTGTG----AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +++ D V  +D+GTG+G    A  +   K+   F     D+   A+E AK N   NGVSE
Sbjct: 173 VKENDTV--IDVGTGSGILSVAAAMVGAKDIQAF-----DLDTVAVESAKQNIELNGVSE 225

Query: 149 RFDTLQSDWFSSVEGLFDVIVSN 171
           +    Q++    + G  DVIV+N
Sbjct: 226 QVTVKQNNLLDGISGEHDVIVAN 248


>gi|293446930|ref|ZP_06663352.1| O-methyltransferase [Escherichia coli B088]
 gi|291323760|gb|EFE63188.1| O-methyltransferase [Escherichia coli B088]
          Length = 285

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIES 177
              W +     FD+I+SNPPY + 
Sbjct: 145 IQQWITQQTVRFDLIISNPPYYQQ 168


>gi|153825680|ref|ZP_01978347.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740617|gb|EDM54726.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|170719525|ref|YP_001747213.1| hypothetical protein PputW619_0338 [Pseudomonas putida W619]
 gi|169757528|gb|ACA70844.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 398

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+SE+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGISEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R L KDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLTKDGILVSASCSMHL 343


>gi|262191798|ref|ZP_06049970.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93]
 gi|262032332|gb|EEY50898.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|260598958|ref|YP_003211529.1| hypothetical protein CTU_31660 [Cronobacter turicensis z3032]
 gi|260218135|emb|CBA32941.1| Uncharacterized protein yfiC [Cronobacter turicensis z3032]
          Length = 256

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
           R+LD+G G+G + L L + +     +  V++  +A E A+ N   +  + R     +D  
Sbjct: 58  RVLDIGAGSGLLALMLAQRTDDTVTLDAVELDSQAAEQARENVAASPWAARIQVHDADIQ 117

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIV 180
            W       +++IVSNPPY +  + 
Sbjct: 118 AWAQQQTQRYELIVSNPPYYDKGVA 142


>gi|288930668|ref|YP_003434728.1| methylase [Ferroglobus placidus DSM 10642]
 gi|288892916|gb|ADC64453.1| methylase [Ferroglobus placidus DSM 10642]
          Length = 192

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 21/151 (13%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            +E   ++ELL+++A+      +++ DVV  +++G G+G V   L  +  F   +  DI+
Sbjct: 18  VYEVAEDSELLLEAAM----EEVKEEDVV--IEIGAGSGFVSEKLKGKCKFL--LATDIN 69

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A ++ K   +        + + +D F  ++G F +I+ NPPY+E    + +G    D+
Sbjct: 70  PHAAKMCKEKGL--------EVVIADLFRGIKGKFTLILFNPPYLELEEEEKVG----DW 117

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             + ++DGG  G+             L ++G
Sbjct: 118 LEK-AIDGGRGGIEVSVEFLKQAKEKLKENG 147


>gi|91218041|ref|ZP_01254992.1| putative RNA methyltransferase [Psychroflexus torquis ATCC 700755]
 gi|91183788|gb|EAS70180.1| putative RNA methyltransferase [Psychroflexus torquis ATCC 700755]
          Length = 184

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           + DL TGTG +   + K++     VG++   +A+E AKSNA  NG+            L 
Sbjct: 40  VYDLYTGTGTIAQFVAKKAKHV--VGIESVLEAIEDAKSNAKLNGIENTSFFAGDMKKLF 97

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +  F    G  DVI+++PP
Sbjct: 98  NSEFIEKHGQPDVIITDPP 116


>gi|90961485|ref|YP_535401.1| methyltransferase [Lactobacillus salivarius UCC118]
 gi|227890575|ref|ZP_04008380.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
 gi|301299660|ref|ZP_07205916.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90820679|gb|ABD99318.1| Methyltransferase [Lactobacillus salivarius UCC118]
 gi|227867513|gb|EEJ74934.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
 gi|300852728|gb|EFK80356.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 252

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 13/117 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  SS+ F    +  LL D A +       K+   +I+DL  G GAV L  L +    
Sbjct: 20  IKIIQSSEVFSFSIDAVLLADFADSL------KKKNSKIVDLCAGNGAVGL-FLSQKVNG 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174
           K + V+I  +  ++A+ + + N + ++   L  D  ++++GL      D++V NPPY
Sbjct: 73  KIIQVEIQKRLADMARRSILLNNLEDKITILNED-LNNLQGLISKDSVDMVVCNPPY 128


>gi|332026824|gb|EGI66933.1| N(6)-adenine-specific DNA methyltransferase 1 [Acromyrmex
           echinatior]
          Length = 215

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDI 129
           +EP  ++ LLVD AL   L  +        L++G+G+G V   LA+  +    + + +DI
Sbjct: 17  YEPSEDSYLLVD-ALEADLEILHAMKPRICLEIGSGSGIVITALAMALKRHNVQFIAIDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYI 175
           +  A    +  ++ N V    D LQ +    +  +  FD+I+ NPPY+
Sbjct: 76  NPDACRATRRTSLINSVD--VDILQMNLLDCIRIKYTFDIILFNPPYV 121


>gi|319891440|ref|YP_004148315.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161136|gb|ADV04679.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465390|gb|ADX77543.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 241

 Score = 39.7 bits (91), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+ L      + KRD  RILD+  G G + L LL +       GV+I  + + +A  + 
Sbjct: 29  TDALLLGHFTEVRKRD--RILDMCAGNGVIPL-LLSDKGNNVITGVEIQPQLVNMAVRSV 85

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
             N + +R   ++ D  + ++      FD+I  NPPY ++
Sbjct: 86  QYNHLEDRITMVEMDINALIQAYSPAQFDLITCNPPYFKA 125


>gi|326332390|ref|ZP_08198668.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae
           bacterium Broad-1]
 gi|325949798|gb|EGD41860.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae
           bacterium Broad-1]
          Length = 357

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G   +AL +  P    +G+DI   ++++A +NA   GV +R   L  D  +
Sbjct: 179 RILDVGCGGGWSSIALARAYPEATVLGIDIDQPSVDMAVANAREAGVEDRVRFLCQDAAT 238

Query: 160 SVEGLFDV 167
             EG  D+
Sbjct: 239 VQEGTVDM 246


>gi|312127403|ref|YP_003992277.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777422|gb|ADQ06908.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 304

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G + +A  K   F   + + VDI   A+++A+ NA  NGV    +  ++D  
Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226

Query: 159 SSVEGLFDVIVSN 171
             +E  FDV+++N
Sbjct: 227 EGIEEKFDVVIAN 239


>gi|212224096|ref|YP_002307332.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009053|gb|ACJ16435.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
          Length = 419

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 85  ALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           ALA  L  +E   D  R+LDL +G G   + L K    F   GV+++  A+E+A+ NA  
Sbjct: 267 ALALLLKTVEGFADGERVLDLYSGVGTFGVWLAKRG--FAVEGVELNPFAVEMARKNAEL 324

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           NGV   F   +++   +  G +D ++ +PP
Sbjct: 325 NGVDVVFKVGRAE--ETSIGDYDTVIVDPP 352


>gi|149182883|ref|ZP_01861342.1| methyltransferase [Bacillus sp. SG-1]
 gi|148849386|gb|EDL63577.1| methyltransferase [Bacillus sp. SG-1]
          Length = 380

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +G DI  + +E+AKSNA   G+ E  +F  +Q   F S +  + VIV NPPY E +
Sbjct: 256 MGTDIDHRMVEVAKSNAFEAGLGELIQFKQMQVKDFHS-DKSYGVIVGNPPYGERI 310


>gi|254976148|ref|ZP_05272620.1| hypothetical protein CdifQC_12574 [Clostridium difficile QCD-66c26]
 gi|255093538|ref|ZP_05323016.1| hypothetical protein CdifC_12879 [Clostridium difficile CIP 107932]
 gi|255315281|ref|ZP_05356864.1| hypothetical protein CdifQCD-7_13052 [Clostridium difficile
           QCD-76w55]
 gi|255517949|ref|ZP_05385625.1| hypothetical protein CdifQCD-_12616 [Clostridium difficile
           QCD-97b34]
 gi|255651065|ref|ZP_05397967.1| hypothetical protein CdifQCD_12831 [Clostridium difficile
           QCD-37x79]
 gi|260684131|ref|YP_003215416.1| hypothetical protein CD196_2397 [Clostridium difficile CD196]
 gi|260687790|ref|YP_003218924.1| hypothetical protein CDR20291_2444 [Clostridium difficile R20291]
 gi|306520921|ref|ZP_07407268.1| hypothetical protein CdifQ_14881 [Clostridium difficile QCD-32g58]
 gi|260210294|emb|CBA64593.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260213807|emb|CBE05773.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 184

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 13/93 (13%)

Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +LDL  GTG++   CL+   +S  F    VDIS ++++I KSN     V      L  D
Sbjct: 44  EVLDLFAGTGSLGIECLSRGAKSCTF----VDISKESIDIVKSNVKKARVESESIILNLD 99

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183
           + ++++ L      FD+I  +PPY +++ ++ +
Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132


>gi|329667224|gb|AEB93172.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026]
          Length = 294

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N + +  D  +++  
Sbjct: 158 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 215

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             ++  +D+IV+N      ++ D L   + D D  ++ +G I
Sbjct: 216 KDIDEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 251


>gi|322388270|ref|ZP_08061874.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus infantis ATCC 700779]
 gi|321140942|gb|EFX36443.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus infantis ATCC 700779]
          Length = 533

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E ++   I D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQEGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|258625579|ref|ZP_05720465.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM603]
 gi|258582132|gb|EEW06995.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM603]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   + N +  R     SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
             +  +D +V+NPP+
Sbjct: 261 DTKHKYDYVVTNPPF 275


>gi|303322338|ref|XP_003071162.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110861|gb|EER29017.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735
           delta SOWgp]
 gi|320040653|gb|EFW22586.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 391

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 70/184 (38%), Gaps = 61/184 (33%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEKRDVVRI 101
           +  ILG + F  + +        PRPETE         +L +  +  S P       +RI
Sbjct: 74  LQYILGDQPFGELDILCRKGVLIPRPETESYTFRTARLILSELRMGSSSP-----APIRI 128

Query: 102 LDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN------------- 144
           LDL TGTG + L L        P    VG+DIS KAL +A+ N   N             
Sbjct: 129 LDLCTGTGCIPLLLHSLLASSIPDLALVGIDISRKALSLARENLEYNISQNHLLPRARQD 188

Query: 145 ---------------GVSERFDTLQS------DWFSSVE---------GLFDVIVSNPPY 174
                           V    D + S      D+ S+ +         G +DV++SNPPY
Sbjct: 189 ISFLQANVLRDEKAELVKREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPY 248

Query: 175 IESV 178
           I  V
Sbjct: 249 ISPV 252


>gi|326776007|ref|ZP_08235272.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
 gi|326656340|gb|EGE41186.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
          Length = 511

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 30/50 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +   LLK+  F + VGVD+S +AL IA      + + ER
Sbjct: 315 RVLDLGCGQGQLVQELLKDVRFTEIVGVDVSMRALTIASRRLKLDRMGER 364


>gi|238782960|ref|ZP_04626988.1| Ribosomal protein L11 methyltransferase [Yersinia bercovieri ATCC
           43970]
 gi|238716163|gb|EEQ08147.1| Ribosomal protein L11 methyltransferase [Yersinia bercovieri ATCC
           43970]
          Length = 289

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER    L  D  +
Sbjct: 157 VIDFGCGSGILAIAALKLG-ATHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKDQPA 215

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV+ 
Sbjct: 216 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAAGVAE 263


>gi|254291240|ref|ZP_04962035.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422804|gb|EDN14756.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|32455489|ref|NP_862615.1| hypothetical protein pAH82_p16 [Lactococcus lactis subsp. lactis]
 gi|7767522|gb|AAF69138.1|AF228680_2 HsdM [Lactococcus lactis]
 gi|9789463|gb|AAF98315.1|AF243383_16 HsdM [Lactococcus lactis subsp. lactis]
          Length = 537

 Score = 39.7 bits (91), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 219 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308


>gi|295398035|ref|ZP_06808091.1| site-specific DNA-methyltransferase [Aerococcus viridans ATCC
           11563]
 gi|294973793|gb|EFG49564.1| site-specific DNA-methyltransferase [Aerococcus viridans ATCC
           11563]
          Length = 384

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 5/55 (9%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSER--FDTLQ-SDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK+NA   GV ++  F  +Q SD+ ++ E  + VIV+NPPY E
Sbjct: 256 MGSDIDHRMIEIAKANAEAAGVGDQIEFKQMQLSDFTTNKE--YGVIVANPPYGE 308


>gi|323309835|gb|EGA63039.1| Mtq2p [Saccharomyces cerevisiae FostersO]
          Length = 221

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155
           + ++G+G+G V   L++     +     + VDI+  ALE     A  N     F + +Q+
Sbjct: 46  VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212
           D  SS+     DV++ NPPY+ +  V D  G  E  D    ++L GG DG++    +   
Sbjct: 106 DLNSSIRNNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165

Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239
           + + L+ DG+  +     N+  +V++ F
Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193


>gi|313113033|ref|ZP_07798671.1| type I restriction-modification system, M subunit [Faecalibacterium
           cf. prausnitzii KLE1255]
 gi|310624647|gb|EFQ07964.1| type I restriction-modification system, M subunit [Faecalibacterium
           cf. prausnitzii KLE1255]
          Length = 848

 Score = 39.7 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 25/123 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  LL+   +A+ L   + R+ ++I D  +G+G++ + + + +  + G G +I   A E+
Sbjct: 192 EVSLLMSEIVAYHL---KDREEIKIYDPTSGSGSLLINIGQCAARYMGNGNNIKYYAQEL 248

Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174
            ++       N V  G      V+   DTL+ DW         ++ + LF D +VSNPPY
Sbjct: 249 KENTYNLTRMNLVMRGILPDNIVTRNGDTLEEDWPYFEENDPVNTYDPLFVDAVVSNPPY 308

Query: 175 IES 177
            ++
Sbjct: 309 SQA 311


>gi|229520914|ref|ZP_04410336.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
 gi|229342147|gb|EEO07143.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|212544758|ref|XP_002152533.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210065502|gb|EEA19596.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 335

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 44/205 (21%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV---------RLTLS 68
           S +  IVD  S  DDR       + +++ K+E+  R   +RD   +         RL L 
Sbjct: 24  SDNSDIVDTSSTFDDRTTIV---SSIKNYKYENGRRYHSFRDGEYLLPNDEREQERLDLL 80

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             TF       LL++  L     R    + VR+LD GTGTG   +   +E+P  + +G D
Sbjct: 81  HHTFR------LLLNGELY----RAPLSNPVRVLDFGTGTGVWAIDFAEENPRTEVLGTD 130

Query: 129 ISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVI--------VSNPPYIESV 178
           +S        SN        RF  D ++S+W    +  FD I        + +   + + 
Sbjct: 131 LSPIQPSWFPSNC-------RFEVDDVESEWLYGYQS-FDYIHCRGMTGSIRDWQKLFAQ 182

Query: 179 IVDCL----GLEVRDFDPRISLDGG 199
            VD L     +EV++++  IS D G
Sbjct: 183 AVDNLQPGGWMEVQEYEIEISSDDG 207


>gi|324993433|gb|EGC25353.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK405]
 gi|327461707|gb|EGF08038.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1]
 gi|327489560|gb|EGF21353.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1058]
          Length = 182

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +        V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-MEAAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|296390860|ref|ZP_06880335.1| hypothetical protein PaerPAb_22015 [Pseudomonas aeruginosa PAb1]
          Length = 221

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  + +R   R+LD+G G G +C AL  E    + VG+D S + +E+A+  A   G   R
Sbjct: 39  LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               + D  S + G FD +V N   ++  +  CL
Sbjct: 95  LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127


>gi|261380685|ref|ZP_05985258.1| methyltransferase domain protein [Neisseria subflava NJ9703]
 gi|284796395|gb|EFC51742.1| methyltransferase domain protein [Neisseria subflava NJ9703]
          Length = 371

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++    D+GTG+G +  A+L +      +  D + KA+  A +N    G+ +  +    D
Sbjct: 192 NIQTAFDIGTGSGVIA-AILAKRGIPDIIATDTNPKAIACAIANLERLGLDKAVNIQSID 250

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   E   D+IV NPP++ +       +E   +DP  ++              +GV +H
Sbjct: 251 LFP--ETCADLIVCNPPWLPAKPTS--AIETALYDPNHAM---------LTAFLNGVRQH 297

Query: 217 LNKDG 221
           LN +G
Sbjct: 298 LNPNG 302


>gi|49475201|ref|YP_033242.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella henselae
           str. Houston-1]
 gi|57013201|sp|Q6G5K3|UBIG_BARHE RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|49238006|emb|CAF27211.1| 3-demethylubiquinone-93-methyltransferase [Bartonella henselae str.
           Houston-1]
          Length = 247

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+G G G +C  + +       VG D S   +E+AK +A  NG+S  + T  ++  
Sbjct: 66  LKILDIGCGGGLLCEPMARLGAMV--VGADASQTNIEVAKIHAAQNGLSIDYRTTTAEAL 123

Query: 159 SSVEGLFDVIVS 170
           ++    FD+I++
Sbjct: 124 ATEGEQFDIILN 135


>gi|305665426|ref|YP_003861713.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170]
 gi|88710181|gb|EAR02413.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170]
          Length = 237

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 12/135 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L   + S       +++   A E    N   +   +R     +   ++
Sbjct: 41  ILDIGTGTGLIALMAAQRSEAETIDAIEVEEGAYEQCVDNFEASPWGDRLFCYHAGLDEF 100

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              +E  +D+IVSNPP+    +    G   RD   R +     D L       DGVS+ L
Sbjct: 101 VDEIEDKYDLIVSNPPFYAEDVTS--GNNARD-KARQNQSLPFDEL------IDGVSKLL 151

Query: 218 NKDGLCSVEIGYNQK 232
           +++G+ +V + Y ++
Sbjct: 152 SQNGVFTVIVPYKEE 166


>gi|319941749|ref|ZP_08016071.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis
           3_1_45B]
 gi|319804682|gb|EFW01549.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis
           3_1_45B]
          Length = 298

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 9/74 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G GTG + +   K+    +  G DI  +A+E A+ NA+ N V  +F      W  
Sbjct: 166 RVLDYGCGTGILAIGA-KKLGAAEVCGTDIDPQAVEAARDNAIRNDVEAQF------WLP 218

Query: 160 S--VEGLFDVIVSN 171
           +   EG F ++V+N
Sbjct: 219 ADMPEGTFSIVVAN 232


>gi|315608028|ref|ZP_07883021.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
           33574]
 gi|315250497|gb|EFU30493.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
           33574]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T ++V + L   L      D  RILD G GTG + +A  K     + VG DI   ++E  
Sbjct: 139 TRMMVSTLLNMDL------DGKRILDCGCGTGILGIAAAKMGA-REVVGYDIDEWSVENT 191

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           + NA  N V E F+    D    + V GLFDV+++N
Sbjct: 192 RHNAELNHV-ENFEVYHGDAHVLNHVNGLFDVVLAN 226


>gi|301169123|emb|CBW28720.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 10810]
          Length = 240

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           ILD+G GTG + L L + +     +  V++   A + A+ N   +    R   +Q+D   
Sbjct: 47  ILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINDSVWKNRIQLIQTDIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIV 180
           +  +    FD+IV+NPPY E  I 
Sbjct: 107 FLQTTAQTFDLIVANPPYFEQGIA 130


>gi|295687569|ref|YP_003591262.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis
           ATCC 21756]
 gi|295429472|gb|ADG08644.1| Cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis
           ATCC 21756]
          Length = 393

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 30/192 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114
           +R F +  +  S   FE RP+  L    A   +L   ++  +  ++ LD+G+G G + + 
Sbjct: 126 YRRFLDADMQYSCAYFE-RPDMTLEEAQAAKKALIGRKLLIQPGMKTLDIGSGWGGLSMT 184

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L K+    +  GV +S + L +AK  A T G+ +R D   +D +  +   FD IVS    
Sbjct: 185 LAKDFGA-RMTGVTLSTEQLALAKERAETAGLGDRIDFRLTD-YRDLNEPFDRIVS-VGM 241

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKV 233
           +E V                       G  +++T  D ++R L++DG+  +  IG     
Sbjct: 242 LEHV-----------------------GAPNFQTYFDTIARLLDEDGVALIHSIGKMHGP 278

Query: 234 DVVRIFESRKLF 245
                F  + +F
Sbjct: 279 GATNAFTQKYIF 290


>gi|255326733|ref|ZP_05367809.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
 gi|255295950|gb|EET75291.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
          Length = 583

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 12/92 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ 147
           E+  V R LD+GTG G     LL  +        DIS +AL   + N + N  +      
Sbjct: 180 ERTPVKRALDVGTGCGIQTFHLLAHAEHV--TATDISERALAFTRFNLLLNAQALNIDPQ 237

Query: 148 ---ERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
               R    +      V G LFD++VSNPP++
Sbjct: 238 NPQARVSLREGSLLEPVAGELFDLVVSNPPFV 269


>gi|239621147|ref|ZP_04664178.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515608|gb|EEQ55475.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 218

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L  ESP      VD++ +A+++  +NA  NG +    T Q D  S+ 
Sbjct: 63  LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 121

Query: 162 ---------------EGLFDVIVSNPP 173
                          +  FDVI SNPP
Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|145483771|ref|XP_001427908.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394991|emb|CAK60510.1| unnamed protein product [Paramecium tetraurelia]
          Length = 460

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ V I DLG G G   + L KE  +   +GV+I  K +E+AK N   + V+   D + +
Sbjct: 143 KEFVIITDLGCGVGGNTVQLAKECHYV--IGVEIESKLIELAKKNCHHSRVN--VDLINA 198

Query: 156 DWFSSVEGLFDVIVSNP 172
           D F+      DVI  NP
Sbjct: 199 DIFTLNNLKTDVIFVNP 215


>gi|330835849|ref|YP_004410577.1| putative methylase [Metallosphaera cuprina Ar-4]
 gi|329567988|gb|AEB96093.1| putative methylase [Metallosphaera cuprina Ar-4]
          Length = 199

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 15/123 (12%)

Query: 56  GWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           G+R F     +L L  + +EP  ++ELL       S+  +EK +   +LD+G+G+G   L
Sbjct: 3   GYRYFSYLGYKLCLDDNVYEPAEDSELLA------SILDLEKGE--SVLDVGSGSG--IL 52

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
            ++  S   + + VDI+  A  + + +A  N +    D L  D  + +  + FD ++ NP
Sbjct: 53  GIVAHSLGARVISVDINPFASLVTQCSARLNNID--IDVLNCDLTTCLRDVAFDSVIFNP 110

Query: 173 PYI 175
           PY+
Sbjct: 111 PYL 113


>gi|319940773|ref|ZP_08015113.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805793|gb|EFW02569.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
          Length = 401

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R L+    TG   LALLK     + V VD S +AL +A++NA  NG + R + L  D F
Sbjct: 227 LRALNCFCYTGGFSLALLKGGAE-EVVSVDSSEEALAMARANAERNGFTNRAEWLCEDVF 285

Query: 159 SSVEGL------FDVIVSNPPYIES 177
           + +  L      FD+++ +PP   S
Sbjct: 286 TCLRRLRDAGEKFDLVILDPPKFAS 310


>gi|227533323|ref|ZP_03963372.1| type I site-specific deoxyribonuclease [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227189042|gb|EEI69109.1| type I site-specific deoxyribonuclease [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 538

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 96  RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           + V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS     
Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
               DTL  DW      LFD +V NPPY
Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|56609587|gb|AAW03320.1| hypothetical protein [Cystobacter fuscus]
          Length = 185

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LDL  GTGA+ L  +      KGV  VD   +AL + ++N  T G S R + L     
Sbjct: 46  RVLDLYAGTGALGLEAVSRGA--KGVVLVDSDREALALCRANTDTLGFSARVEVLAQPVA 103

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCL 183
            ++E L      F +I ++PPY   V+   L
Sbjct: 104 RALETLGRRGDRFQLIFADPPYAARVVETVL 134


>gi|6320344|ref|NP_010424.1| Mtq2p [Saccharomyces cerevisiae S288c]
 gi|74676352|sp|Q03920|MTQ2_YEAST RecName: Full=eRF1 methyltransferase catalytic subunit MTQ2;
           Short=eRF1 MTase catalytic subunit MTQ2; AltName:
           Full=N(5)-glutamine methyltransferase MTQ2
 gi|665673|emb|CAA88222.1| unknown [Saccharomyces cerevisiae]
 gi|45269245|gb|AAS56002.1| YDR140W [Saccharomyces cerevisiae]
 gi|151942124|gb|EDN60480.1| methyltransferase [Saccharomyces cerevisiae YJM789]
 gi|190404901|gb|EDV08168.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|207346679|gb|EDZ73106.1| YDR140Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256274421|gb|EEU09324.1| Mtq2p [Saccharomyces cerevisiae JAY291]
 gi|259145381|emb|CAY78645.1| Mtq2p [Saccharomyces cerevisiae EC1118]
 gi|285811159|tpg|DAA11983.1| TPA: Mtq2p [Saccharomyces cerevisiae S288c]
 gi|323305651|gb|EGA59392.1| Mtq2p [Saccharomyces cerevisiae FostersB]
 gi|323338288|gb|EGA79519.1| Mtq2p [Saccharomyces cerevisiae Vin13]
 gi|323349311|gb|EGA83538.1| Mtq2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355726|gb|EGA87542.1| Mtq2p [Saccharomyces cerevisiae VL3]
          Length = 221

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 9/148 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG----VGVDISCKALEIAKSNAVTNGVSERF-DTLQS 155
           + ++G+G+G V   L++     +     + VDI+  ALE     A  N     F + +Q+
Sbjct: 46  VCEIGSGSGIVTTFLMQNKIIPQENSIHLAVDINPWALEATLDTAKLNSCKSSFLEVIQA 105

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIV-DCLG-LEVRDFDPRISLDGGIDGLSHYRTIADG 212
           D  SS+     DV++ NPPY+ +  V D  G  E  D    ++L GG DG++    +   
Sbjct: 106 DLNSSIRNNQVDVLIFNPPYVPAECVPDVPGSREEADQWLDLALLGGKDGMAITDKLLRQ 165

Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIF 239
           + + L+ DG+  +     N+  +V++ F
Sbjct: 166 LEQILSPDGVAYILFCARNKPKEVIKRF 193


>gi|116048706|ref|YP_792494.1| hypothetical protein PA14_54050 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115583927|gb|ABJ09942.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 221

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  + +R   R+LD+G G G +C AL  E    + VG+D S + +E+A+  A   G   R
Sbjct: 39  LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               + D  S + G FD +V N   ++  +  CL
Sbjct: 95  LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127


>gi|315222012|ref|ZP_07863923.1| methylase family protein [Streptococcus anginosus F0211]
 gi|315188978|gb|EFU22682.1| methylase family protein [Streptococcus anginosus F0211]
          Length = 393

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 13/79 (16%)

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVE 162
           A  L  +K+      +G DI  + +EIAK NA   GVSE       R   L +D    + 
Sbjct: 254 ARALGQIKQDIQLDILGTDIDARMVEIAKRNAEEAGVSEQIVFKQMRLQDLHTD---KIN 310

Query: 163 GLFDVIVSNPPYIESVIVD 181
           G   VIVSNPPY E ++ D
Sbjct: 311 G---VIVSNPPYGERLLDD 326


>gi|307288976|ref|ZP_07568944.1| N-6 DNA Methylase [Enterococcus faecalis TX0109]
 gi|306500067|gb|EFM69416.1| N-6 DNA Methylase [Enterococcus faecalis TX0109]
          Length = 343

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 27  KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 86

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                 DTL  DW +     FD +V NPPY  +   D   L+   F+
Sbjct: 87  MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 133


>gi|260557187|ref|ZP_05829403.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 19606]
 gi|260409293|gb|EEX02595.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 19606]
          Length = 337

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D+  A  LP + +    RI D 
Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDAGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|257889088|ref|ZP_05668741.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,141,733]
 gi|257825160|gb|EEV52074.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,141,733]
          Length = 512

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L  +   K  G +++     +AK N + +GV +E 
Sbjct: 196 KERRFFSVFDPTMGSGSLMLNVRNYLTHTDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 255

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 256 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 285


>gi|254496396|ref|ZP_05109277.1| 3-demethylubiquinone-9 3-methyltransferase [Legionella drancourtii
           LLAP12]
 gi|254354387|gb|EET13041.1| 3-demethylubiquinone-9 3-methyltransferase [Legionella drancourtii
           LLAP12]
          Length = 230

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 16/124 (12%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           DT  P      + ++ L F    +   DV  +LD+G G G +C A+ K     K  G+D 
Sbjct: 24  DTEGPLKTLHDINETRLQFIAQHVNLTDV-SVLDIGCGGGILCEAMAKSGA--KVTGIDA 80

Query: 130 SCKALEIAKSNAVTNGVS--------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            C+A++ A+ +A +N ++        E +   Q D  + +E L  V      Y E V+  
Sbjct: 81  ECEAIQAAQEHAKSNDLAIDYFCTPVETYKNKQYDVITCMEMLEHV-----EYPEIVLEH 135

Query: 182 CLGL 185
           C+ L
Sbjct: 136 CIRL 139


>gi|2689699|gb|AAB91416.1| modification subunit [Lactococcus lactis subsp. lactis bv.
           diacetylactis]
          Length = 531

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLLNPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302


>gi|54294134|ref|YP_126549.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens]
 gi|53753966|emb|CAH15437.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens]
 gi|307609945|emb|CBW99473.1| hypothetical protein LPW_12461 [Legionella pneumophila 130b]
          Length = 390

 Score = 39.7 bits (91), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LDL T TG   L   K         VD S +A+E AK+NAV N ++   F    +  +
Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281

Query: 159 SSVEGLFDVIVSNPP 173
             + G +DV++ +PP
Sbjct: 282 LKMAGEYDVVILDPP 296


>gi|313105613|ref|ZP_07791879.1| hypothetical protein PA39016_000080049 [Pseudomonas aeruginosa
           39016]
 gi|310878381|gb|EFQ36975.1| hypothetical protein PA39016_000080049 [Pseudomonas aeruginosa
           39016]
          Length = 221

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  + +R   R+LD+G G G +C AL  E    + VG+D S + +E+A+  A   G   R
Sbjct: 39  LQALRQRAPRRLLDIGCGEGWLCRALAGE--VGECVGIDASPELIELAR--AAGGGSFRR 94

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               + D  S + G FD +V N   ++  +  CL
Sbjct: 95  LAYRELDAASGL-GRFDALVCNFSLLDEDLAGCL 127


>gi|291276853|ref|YP_003516625.1| hypothetical protein HMU06260 [Helicobacter mustelae 12198]
 gi|290964047|emb|CBG39887.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 258

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 8/102 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNA 141
           DS   ++  R   R    +LD+G G+G   L LL    F      V+       +A+ NA
Sbjct: 20  DSLFLYAFARNFLRKKFSLLDVGAGSGI--LGLLCARDFAISATLVEKDAHNAFLAQQNA 77

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVD 181
            TN +    +  Q D+  F S E  +DVI+SNPP+  S I+D
Sbjct: 78  ATNQLEA--EVYQGDFLDFCSSER-YDVILSNPPFYRSEILD 116


>gi|257460669|ref|ZP_05625770.1| methyltransferase small [Campylobacter gracilis RM3268]
 gi|257442000|gb|EEV17142.1| methyltransferase small [Campylobacter gracilis RM3268]
          Length = 413

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 11/84 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LD+G G G + L L ++   FK + +   +I  + LEI K N+  NG++   + L +D+
Sbjct: 215 VLDVGAGCGILGLLLKRD---FKSINLSLLEIQERNLEILKLNSSQNGLAA--EILHADF 269

Query: 158 --FSSVEGLFDVIVSNPPYIESVI 179
             F S E  FD IVSNPP+    I
Sbjct: 270 AEFKS-EKRFDFIVSNPPFYRERI 292


>gi|46019874|emb|CAE52400.1| putative restriction-modification enzyme type I M subunit
           [Streptococcus thermophilus]
          Length = 537

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L + +       V   G +++     +A+ N + +GV  ER
Sbjct: 219 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308


>gi|324990698|gb|EGC22634.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK353]
          Length = 182

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LDL  G+G++ +  +        V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKELERFDLLKMESGR 105

Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
              ++ G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEERQLLSQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|297183728|gb|ADI19852.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium EB000_46D07]
          Length = 71

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 35/51 (68%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +R+LDLGTG+G + LALL E P   GVG+DI+  AL  A+ NA +  + +R
Sbjct: 1   MRLLDLGTGSGCLLLALLSELPEAYGVGIDINSDALATARCNAASLNLGDR 51


>gi|262172301|ref|ZP_06039979.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
 gi|261893377|gb|EEY39363.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   + N +  R     SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANQL--RGTVYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
             +  +D +V+NPP+
Sbjct: 261 DTKHKYDYVVTNPPF 275


>gi|153217439|ref|ZP_01951181.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113552|gb|EAY32372.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 340

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|23465867|ref|NP_696470.1| hypothetical protein BL1306 [Bifidobacterium longum NCC2705]
 gi|227547538|ref|ZP_03977587.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317483527|ref|ZP_07942511.1| methyltransferase small domain-containing protein [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|23326568|gb|AAN25106.1| conserved hypothetical protein possibly in upfoo20 [Bifidobacterium
           longum NCC2705]
 gi|227211948|gb|EEI79844.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915017|gb|EFV36455.1| methyltransferase small domain-containing protein [Bifidobacterium
           sp. 12_1_47BFAA]
          Length = 218

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L  ESP      VD++ +A+++  +NA  NG +    T Q D  S+ 
Sbjct: 63  LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 121

Query: 162 ---------------EGLFDVIVSNPP 173
                          +  FDVI SNPP
Sbjct: 122 LPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|322804332|emb|CBZ01882.1| predicted O-methyltransferase [Clostridium botulinum H04402 065]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174
             N + E+   ++ D         +E + DV+  NPPY
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126


>gi|296106821|ref|YP_003618521.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila
           2300/99 Alcoy]
 gi|295648722|gb|ADG24569.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila
           2300/99 Alcoy]
          Length = 390

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LDL T TG   L   K         VD S +A+E AK+NAV N ++   F    +  +
Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSAQAIEQAKNNAVLNHLNTIEFIKADAREY 281

Query: 159 SSVEGLFDVIVSNPP 173
             + G +DV++ +PP
Sbjct: 282 LKMAGEYDVVILDPP 296


>gi|289706188|ref|ZP_06502552.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289557100|gb|EFD50427.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 528

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------- 145
           ++R V R LD+G G G   L LL  +        D+S +AL   + N + N         
Sbjct: 182 QRRPVARALDVGVGCGIQTLHLLAHADHV--TATDLSERALAFTRFNLLLNADVLGLDRE 239

Query: 146 -VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
            + +R      D  + V G  FD++VSNPP++
Sbjct: 240 RLEDRVRLAAGDLLAPVAGERFDLVVSNPPFV 271


>gi|260102294|ref|ZP_05752531.1| type I restriction-modification system [Lactobacillus helveticus
           DSM 20075]
 gi|260083891|gb|EEW68011.1| type I restriction-modification system [Lactobacillus helveticus
           DSM 20075]
          Length = 540

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 9/88 (10%)

Query: 96  RDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           + V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS     
Sbjct: 230 KQVRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMH 289

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
               DTL  DW      LFD +V NPPY
Sbjct: 290 LRNGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|206563136|ref|YP_002233899.1| putative methyltransferase [Burkholderia cenocepacia J2315]
 gi|198039176|emb|CAR55140.1| putative methyltransferase [Burkholderia cenocepacia J2315]
          Length = 282

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 99  VRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A  +G+  RF
Sbjct: 50  TRVLDVGCGTGAVTLAIARRLGASTQCTGIDISARMIDAARARADRSGLPARF 102


>gi|120434502|ref|YP_860199.1| hypothetical protein GFO_0132 [Gramella forsetii KT0803]
 gi|262828327|sp|A0LXM6|TRMN6_GRAFK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|117576652|emb|CAL65121.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 240

 Score = 39.7 bits (91), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 22/154 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTGTG + L L + S       ++I   A E +  N   +   +R     + +   
Sbjct: 42  ILDIGTGTGLIALMLAQRSDAELIDALEIEENAYEQSVENFENSDWGDRLFCYHAAFDEF 101

Query: 161 VEGL-----FDVIVSNPP-YIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIAD 211
           VE +     +D+I+SNPP Y E+      G E RD   F   + L   I G SH      
Sbjct: 102 VEEMQDEEKYDLIISNPPFYSENYKT---GDEYRDQARFADALPLTELIQGASHL----- 153

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                L+++G   + I ++++   + I  S  LF
Sbjct: 154 -----LSENGHLDLIIPFSEERKALEITSSHNLF 182


>gi|326407943|gb|ADZ65012.1| type I restriction-modification system, M subunit [Lactococcus
           lactis subsp. lactis CV56]
          Length = 531

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302


>gi|319939681|ref|ZP_08014040.1| methyltransferase [Streptococcus anginosus 1_2_62CV]
 gi|319811270|gb|EFW07576.1| methyltransferase [Streptococcus anginosus 1_2_62CV]
          Length = 393

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 13/79 (16%)

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVE 162
           A  L  +K+      +G DI  + +EIAK NA   GVSE       R   L +D    + 
Sbjct: 254 ARALGQIKQDIQLDILGTDIDARMVEIAKRNAEEAGVSEQILFKQMRLQDLHTD---KIN 310

Query: 163 GLFDVIVSNPPYIESVIVD 181
           G   VIVSNPPY E ++ D
Sbjct: 311 G---VIVSNPPYGERLLDD 326


>gi|310821830|ref|YP_003954188.1| hypothetical protein STAUR_4581 [Stigmatella aurantiaca DW4/3-1]
 gi|309394902|gb|ADO72361.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 250

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLGTG+G + L L K     +  G+++  +   +A+ N   N   ++   +Q D   
Sbjct: 53  RLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNRCEQQVTLVQGDLRQ 112

Query: 160 S----VEGLFDVIVSNPPY 174
                  G F  ++ NPPY
Sbjct: 113 VSRLFAAGSFCHVLCNPPY 131


>gi|261250466|ref|ZP_05943041.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP
           102891]
 gi|260939035|gb|EEX95022.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP
           102891]
          Length = 295

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +          EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231


>gi|21228051|ref|NP_633973.1| methyltransferase [Methanosarcina mazei Go1]
 gi|20906485|gb|AAM31645.1| methyltransferase [Methanosarcina mazei Go1]
          Length = 266

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           E E L  S  A +L ++   D V     ++L+ G G GA  + L K +P  +   +DIS 
Sbjct: 10  EREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISP 69

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LE A+ N   NG+ +    LQ++ FS
Sbjct: 70  ESLEKARENTEKNGI-KNVKFLQANIFS 96


>gi|81427947|ref|YP_394946.1| putative nucleotide methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78609588|emb|CAI54634.1| Putative nucleotide methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 201

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + + L K +P  +   VD++ +AL +A+ N   N + +     +S  + +
Sbjct: 63  ILDMGCGYGPIGMTLAKLAPERQIDMVDVNERALGLAQKNCDLNQI-QNVAIFESAEYQN 121

Query: 161 VEGLFDVIVSNPP 173
           V   +  I++NPP
Sbjct: 122 VTAQYAAILTNPP 134


>gi|157157132|ref|YP_001464546.1| methyltransferase family protein [Escherichia coli E24377A]
 gi|229470500|sp|A7ZRW7|RLMG_ECO24 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157079162|gb|ABV18870.1| methyltransferase family protein [Escherichia coli E24377A]
          Length = 378

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P  K V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S V+   F+ ++ NPP+
Sbjct: 292 SGVKPFRFNAVLCNPPF 308


>gi|332796421|ref|YP_004457921.1| methyltransferase small domain-containing protein [Acidianus
           hospitalis W1]
 gi|332694156|gb|AEE93623.1| methyltransferase small domain protein [Acidianus hospitalis W1]
          Length = 184

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 26/141 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG G G + + +  ++   K   +D++  A+  AK N     +  R   ++SD  S+
Sbjct: 49  VVDLGCGYGVIGIFIALKNENLKVYMLDVNPLAIATAKMNVERYNLQNRVVVMKSDVLSA 108

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           ++   D I SNPP                      L  G+D L  +   A+  +  L K 
Sbjct: 109 LQEKVDAIYSNPP----------------------LSKGVDFLQKF---AEQSAEKLKKG 143

Query: 221 GLCSVEIGYNQKVDVVRIFES 241
           G   + + Y  + +V++IF +
Sbjct: 144 GFIQMVV-YKGENNVLKIFSN 163


>gi|283458471|ref|YP_003363097.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
 gi|283134512|dbj|BAI65277.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
          Length = 207

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V +T ++  F P       +D   A  L         R+LD+G G G + L L   +P 
Sbjct: 28  KVTVTTANGIFSPS-----GIDKGTAILLQEAPDPQGTRMLDIGCGWGPITLTLAMLAPQ 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +   VD++ +++ + + NA   G+S    T+ +      E  FD I SNPP
Sbjct: 83  AQVHAVDVNSRSIGLTERNAAALGLSNV--TVGTPESVDPELRFDTIWSNPP 132


>gi|227879343|ref|ZP_03997207.1| methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256844518|ref|ZP_05550004.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849093|ref|ZP_05554526.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262047575|ref|ZP_06020530.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US]
 gi|293381049|ref|ZP_06627070.1| methyltransferase small domain protein [Lactobacillus crispatus
           214-1]
 gi|295692235|ref|YP_003600845.1| methyltransferase small [Lactobacillus crispatus ST1]
 gi|312977928|ref|ZP_07789674.1| 16S RNA methylase [Lactobacillus crispatus CTV-05]
 gi|227861064|gb|EEJ68719.1| methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256613596|gb|EEU18799.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713869|gb|EEU28857.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572151|gb|EEX28716.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US]
 gi|290922349|gb|EFD99330.1| methyltransferase small domain protein [Lactobacillus crispatus
           214-1]
 gi|295030341|emb|CBL49820.1| Methyltransferase small [Lactobacillus crispatus ST1]
 gi|310895235|gb|EFQ44303.1| 16S RNA methylase [Lactobacillus crispatus CTV-05]
          Length = 206

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 18/149 (12%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +  Q +F T+   +  +H   + +    D  +++ T  +  F     +++ VD      +
Sbjct: 4   EKNQMYFATDPTAKHDQHVVDYHV----DNIDLKFTTDAGVF-----SKMRVDYGSGVLI 54

Query: 91  PRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +  +DVV     ILD+GTG G + L   K  P      VD++ + L +AK NA  N +
Sbjct: 55  KAM--KDVVFPKDNILDVGTGYGPIGLFAAKFWPDQTVDMVDVNERGLSLAKQNAQVNHI 112

Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPP 173
            +  +   SD +  V+    F +I++NPP
Sbjct: 113 -DNVNIYSSDCYEHVDNDKKFGLILTNPP 140


>gi|254465429|ref|ZP_05078840.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I]
 gi|206686337|gb|EDZ46819.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I]
          Length = 404

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA+L      +   VD S  ALE+A   A   G  ++F   Q D F
Sbjct: 231 ARVLDVFSHVGGFGLAMLAGG-AGQATCVDGSAAALELAAQGAEAGGFKDKFTARQGDAF 289

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      FDV++ +PP
Sbjct: 290 DVLTALGEEGESFDVVICDPP 310


>gi|118589217|ref|ZP_01546623.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614]
 gi|118437917|gb|EAV44552.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614]
          Length = 218

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           +L+LG GTG   +A  K  P  +  GVDIS   LE A+ N    G+++R   ++ D    
Sbjct: 48  VLELGCGTGRNLIAAAKAYPDVRFFGVDISRNMLETAQKNIDKAGLTDRITLVEGDAANP 107

Query: 159 SSVEGL 164
           ++ EGL
Sbjct: 108 AATEGL 113


>gi|323359328|ref|YP_004225724.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
 gi|323275699|dbj|BAJ75844.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
          Length = 367

 Score = 39.7 bits (91), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160
           +DL  GTG V   L    P  + +  D S  A+  A++ A  NGV++R   ++ D   S 
Sbjct: 228 IDLACGTGIVAATLATRHPSLRVLACDQSAIAVASARATAEANGVADRVTVVRDDMLGSH 287

Query: 161 VEGLFDVIVSNPPYIESVIV 180
            +     I  NPP+     V
Sbjct: 288 ADDSAAFIALNPPFHSGAAV 307


>gi|333023841|ref|ZP_08451905.1| hypothetical protein STTU_1345 [Streptomyces sp. Tu6071]
 gi|332743693|gb|EGJ74134.1| hypothetical protein STTU_1345 [Streptomyces sp. Tu6071]
          Length = 528

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +  R+LDLG G G +   LLK++ F   +G+D+S +AL+IA      + + ER
Sbjct: 330 NATRVLDLGCGEGTLVRELLKDTRFTHVLGMDVSQRALQIAARRLRVDRMPER 382


>gi|300070273|gb|ADJ59673.1| type I restriction-modification system, M subunit [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 539

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302


>gi|297625531|ref|YP_003687294.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921296|emb|CBL55849.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 329

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSDWF 158
           +LDLG G+G +   L + +P     GVD S  A++  +  +  NG  V+  +    +DW 
Sbjct: 191 LLDLGCGSGILATLLARANPEATVHGVDTSLAAVDSTRITSEANGRHVTVHWAWNLNDWP 250

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
           +      DVIV NPP+   V  D
Sbjct: 251 ADS---LDVIVCNPPFHRGVAKD 270


>gi|125623518|ref|YP_001032001.1| putative type I site-specific deoxyribonuclease [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124492326|emb|CAL97260.1| putative type I site-specific deoxyribonuclease [Lactococcus lactis
           subsp. cremoris MG1363]
          Length = 545

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 219 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 278

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 279 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 308


>gi|119510746|ref|ZP_01629873.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414]
 gi|119464610|gb|EAW45520.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414]
          Length = 393

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P  + VG+D+S   LE+AK     
Sbjct: 41  AAYNFCTGRKPPKQDIRILDAGCGSGVSTEYLVHLNPQAQVVGIDLSAGTLEVAKERCKR 100

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168
           +G     F  L       + G FD+I
Sbjct: 101 SGADRVEFHHLSLYDVEQLPGEFDLI 126


>gi|77359469|ref|YP_339044.1| SAM-dependent methyltransferase(yfiC) [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123587949|sp|Q3IG80|TRMN6_PSEHT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|76874380|emb|CAI85601.1| conserved protein of unknown function ; putative SAM-dependent
           methyltransferase(yfiC) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 232

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           +LD+GTGTG + L   + SP      V++   A + A  N   +    +     ++Q+  
Sbjct: 39  LLDIGTGTGLLALMCKQRSPQLTITAVEVDKNAYQQALQNIAASPWPNIEVHQQSIQT-- 96

Query: 158 FSSVEGLFDVIVSNPPY 174
           F+S +  FDV+++NPPY
Sbjct: 97  FNSAQP-FDVVIANPPY 112


>gi|116747965|ref|YP_844652.1| type 12 methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116697029|gb|ABK16217.1| Methyltransferase type 12 [Syntrophobacter fumaroxidans MPOB]
          Length = 338

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R+ +RILD+G G+G    A    +    G G+DI   A+  A +N    G+ +RF  
Sbjct: 162 VSGRNPMRILDVGCGSGVFLHAAHSANRNATGAGLDIDEAAVRQATNNIAQWGLEDRFRI 221

Query: 153 LQSDWF---SSVEGLFDVIV 169
              D       +EG FD+I 
Sbjct: 222 FHGDTRHPPGGLEGPFDLIT 241


>gi|228473017|ref|ZP_04057774.1| 23S rRNA-methyltransferase [Capnocytophaga gingivalis ATCC 33624]
 gi|228275599|gb|EEK14376.1| 23S rRNA-methyltransferase [Capnocytophaga gingivalis ATCC 33624]
          Length = 469

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+  AK NA  N +S           + 
Sbjct: 326 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAIADAKENAQNNQISNVDFFVGDMKNVF 383

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           ++ F +  GL DVI+++PP
Sbjct: 384 NEEFITTHGLPDVIITDPP 402


>gi|257387512|ref|YP_003177285.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
 gi|257169819|gb|ACV47578.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
          Length = 250

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           KR   R+LD+G G G+  L   ++       GVDIS  A+E+ +  A   G+   F T  
Sbjct: 43  KRPTDRVLDVGCGNGSHVLFFAEQG--LSAAGVDISKPAIELGRQRAAETGLDVDFKTGD 100

Query: 155 SDWFSSVEGLFDVIVSN 171
           +   S     FD++VS+
Sbjct: 101 AADLSWGSETFDLVVSD 117


>gi|225023405|ref|ZP_03712597.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC
           23834]
 gi|224943883|gb|EEG25092.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC
           23834]
          Length = 369

 Score = 39.7 bits (91), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 15/119 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G V  ALL           D S +A+  A++N    G+      LQ+D F   E
Sbjct: 193 DIGTGSG-VIAALLARRGLQPVTATDNSPRAVACARANFQRLGLPP-IRLLQTDLFP--E 248

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  D+IV NPP++ +       +E   +DP         G +  ++       HLN  G
Sbjct: 249 GCADLIVCNPPWLPA--KPAADIETALYDP---------GSAMLQSFLQQAPAHLNPGG 296


>gi|332665116|ref|YP_004447904.1| type 12 methyltransferase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333930|gb|AEE51031.1| Methyltransferase type 12 [Haliscomenobacter hydrossis DSM 1100]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 4/59 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +LDLG G G +   LL+E  F + VGVD+S  +L++A        +T    ER + LQS
Sbjct: 286 VLDLGCGEGRLLKMLLREGQFTRIVGVDVSFYSLQVATRRLYLKEMTPKQKERIELLQS 344


>gi|322692228|gb|EFY84166.1| hypothetical protein MAC_09792 [Metarhizium acridum CQMa 102]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 15/131 (11%)

Query: 64  RLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +L +    + P+  PET     +     LP I K      L++G G+G + L L      
Sbjct: 34  QLQIHPSVYSPKYFPETLWYGQN-----LPSIVKGG--SFLEIGVGSGLISLHLAASGS- 85

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESVIV 180
            K VG DI+  A+E  + N   N     F  + SD F  ++G FD I  N P+ I++ + 
Sbjct: 86  -KVVGADINPFAVETTQQNFSRNQQEGTF--IVSDIFDKIDGRFDFIFWNHPWQIDASVP 142

Query: 181 DCLGLEVRDFD 191
           D L  E + FD
Sbjct: 143 DELKTE-KTFD 152


>gi|304414236|ref|ZP_07395604.1| methylase for 50S ribosomal subunit protein L11 [Candidatus
           Regiella insecticola LSR1]
 gi|304283450|gb|EFL91846.1| methylase for 50S ribosomal subunit protein L11 [Candidatus
           Regiella insecticola LSR1]
          Length = 330

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 87  AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  L  ++  D+V   I+D G G+G + +A LK       +G+DI  +A++ ++ N   N
Sbjct: 181 ALCLQWLDSLDLVGKTIIDFGCGSGILAIAALKLGAA-HAIGIDIDAQAIQASRDNVQRN 239

Query: 145 GVSERFD 151
           GVSE  D
Sbjct: 240 GVSENLD 246


>gi|268679452|ref|YP_003303883.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617483|gb|ACZ11848.1| methyltransferase [Sulfurospirillum deleyianum DSM 6946]
          Length = 253

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 7/74 (9%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+G+GTG  ++ LALL          +D S K L I K +A   G+     T QSDW 
Sbjct: 47  LLDIGSGTGTFSIPLALLH----VNVTAIDTSAKMLAILKEDAQNEGIEGFIKTYQSDWD 102

Query: 159 S-SVEGLFDVIVSN 171
           S ++   +D+++++
Sbjct: 103 SFALTTPYDIVLAS 116


>gi|22416339|emb|CAC87150.1| restriction-modification enzyme type I M subunit [Streptococcus
           thermophilus]
          Length = 531

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L + +       V   G +++     +A+ N + +GV  ER
Sbjct: 213 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302


>gi|330830946|ref|YP_004393898.1| ribosomal protein L11 methyltransferase [Aeromonas veronii B565]
 gi|328806082|gb|AEB51281.1| Ribosomal protein L11 methyltransferase [Aeromonas veronii B565]
          Length = 292

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 23/168 (13%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV-----RLTLSSDTFE-PRPE 77
            DP   +   Q+ F  N   +  + E    +  W D ++      RL +     + P P+
Sbjct: 64  TDPAPTIAFFQQIFGENVGYKVEQLEDKDWVREWMDHFHPMQFGERLWICPSWRDVPNPD 123

Query: 78  T-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
              +++D  LAF           L  ++  D+    ++D G G+G + +A LK     + 
Sbjct: 124 AVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVVDFGCGSGILGIAALKLG-AARV 182

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
           +G+DI  +A++ ++ NA  NGV+++ +  L +D    VE   DV+V+N
Sbjct: 183 IGIDIDPQAIQASRDNAARNGVADQIELYLPADQPQDVEA--DVVVAN 228


>gi|150401069|ref|YP_001324835.1| methyltransferase small [Methanococcus aeolicus Nankai-3]
 gi|150013772|gb|ABR56223.1| methyltransferase small [Methanococcus aeolicus Nankai-3]
          Length = 201

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           N + T  +D+  F P+      +D      +  ++      ILD+G G G V +++  E 
Sbjct: 23  NKKFTFKTDSGIFSPKK-----IDKGTKILVEALQLGKNYDILDIGCGYGVVGISIANEV 77

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGV-----SERFDTLQSDWFSSVEG-LFDVIVSNPP 173
                   DI+ +A+ +AK N   N +      ++   +Q + + +V+   +D+I+SNPP
Sbjct: 78  NSI--TMTDINNRAVNLAKKNLKLNNIDKYLEEDKITIVQGNLYQNVKNKKYDLIISNPP 135


>gi|221134002|ref|ZP_03560307.1| hypothetical protein GHTCC_03659 [Glaciecola sp. HTCC2999]
          Length = 388

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP IE   VV   DLG G G +   +L ++P  K   VD S  A+E AK N V +   E+
Sbjct: 233 LPLIEGEHVV---DLGCGNGVIGCTVLADAPNAKVTFVDESYMAIESAKRN-VQDNFPEQ 288

Query: 150 F---DTLQSDWFSSVE-GLFDVIVSNPPY 174
           +   D + ++  S V+    D+++ NPP+
Sbjct: 289 YAQCDFVVANCLSQVDLEHVDLVLCNPPF 317


>gi|332654575|ref|ZP_08420318.1| putative methyltransferase [Ruminococcaceae bacterium D16]
 gi|332516539|gb|EGJ46145.1| putative methyltransferase [Ruminococcaceae bacterium D16]
          Length = 409

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A L  +       VD+S  A+++A+ NAV NG+  R D L +D F
Sbjct: 238 RVLDCFTHTGSFALNAALGGAEHV--TAVDVSQAAVDLARDNAVRNGLEGRMDFLCADVF 295

Query: 159 SSVEGL-----FDVIVSNPP 173
             +  L     +D I+ +PP
Sbjct: 296 DLLPTLEHQPDYDFIILDPP 315


>gi|282863639|ref|ZP_06272697.1| methyltransferase small [Streptomyces sp. ACTE]
 gi|282561340|gb|EFB66884.1| methyltransferase small [Streptomyces sp. ACTE]
          Length = 505

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L   + +   +    D++ +AL+  +     +G +   D  +
Sbjct: 154 RRPVASALDLGTGSGIQALHAAQHA--TQVTATDVNPRALDFTRLTLALSGAAP-ADLRE 210

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V  L +D+IVSNPP+   VI     L  R        DGG+ G    RT+    
Sbjct: 211 GSLFEPVGDLTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQQA 259

Query: 214 SRHLNKDGLCS 224
              LN  G   
Sbjct: 260 GDRLNDGGYAQ 270


>gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + L LL+ +   + V V++  + +EI +     +G+ ++   +  D   +
Sbjct: 78  VLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEHGLEDQLTVICKDALKT 135

Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183
               FD++V+N PY I S +V  L
Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159


>gi|210622471|ref|ZP_03293176.1| hypothetical protein CLOHIR_01124 [Clostridium hiranonis DSM 13275]
 gi|210154184|gb|EEA85190.1| hypothetical protein CLOHIR_01124 [Clostridium hiranonis DSM 13275]
          Length = 189

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 15/109 (13%)

Query: 101 ILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +LDL  G+G++   CL+   E   F     D+S ++++I +SN     V      +  D+
Sbjct: 45  VLDLFAGSGSLGIECLSRGAEHCVFS----DLSKESIKIIQSNIKKARVERESTVINKDY 100

Query: 158 FSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            + +  +      FD+I+ +PPY E + VDC  +E  D +  +S DG I
Sbjct: 101 KNVISDMGIKKQEFDIIMLDPPYYEGLFVDC--IERIDKNQILSEDGVI 147


>gi|163790646|ref|ZP_02185074.1| type I restriction-modification system methyltransferase subunit
           [Carnobacterium sp. AT7]
 gi|159874094|gb|EDP68170.1| type I restriction-modification system methyltransferase subunit
           [Carnobacterium sp. AT7]
          Length = 540

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVD 128
           + P+P  +L+    L       E +    + D   G+G++ L   K   E       G +
Sbjct: 201 YTPQPVAKLMTQIVLQGK----ENQKGFSVYDPTMGSGSLLLNAKKYSNEPGTISYFGQE 256

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GVS         DTL  DW +     FD ++ NPPY
Sbjct: 257 LNTSTYNLARMNMILHGVSTANQDLHNADTLDQDWPTEEPTNFDAVLMNPPY 308


>gi|51245141|ref|YP_065025.1| putative SAM-dependent methyltransferase [Desulfotalea psychrophila
           LSv54]
 gi|81642445|sp|Q6ANQ6|RLMF_DESPS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|50876178|emb|CAG36018.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 309

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA----KSNA 141
           LA  LP   K   +R+LD+GTG   +   +  +S  +  VG DI   A++IA    ++N+
Sbjct: 101 LAEDLPTSAKGKKIRVLDIGTGANCIYPIIGSQSYGWHFVGTDIDPLAIKIAGMIVQANS 160

Query: 142 VTNG---VSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
             NG   + ++ D  +   F  +  E  FD+ + NPP+  S+
Sbjct: 161 CLNGKITLKQQLD--KKLIFKGIINEDKFDLTMCNPPFHASL 200


>gi|313677810|ref|YP_004055806.1| methyltransferase small [Marivirga tractuosa DSM 4126]
 gi|312944508|gb|ADR23698.1| methyltransferase small [Marivirga tractuosa DSM 4126]
          Length = 237

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 1/81 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +V  +L++GTGTG + L L +     K   V+I+  A E A++N   +  + R   +  D
Sbjct: 36  NVRAVLEVGTGTGVLSLMLAQRFSDIKIDAVEINPIAYEEAQNNFKNSKWNARLKVVLED 95

Query: 157 WFS-SVEGLFDVIVSNPPYIE 176
           +     +  +D+I SNPP+ +
Sbjct: 96  FIEFETDHKYDLIFSNPPFFK 116


>gi|302552775|ref|ZP_07305117.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470393|gb|EFL33486.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 258

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 45/89 (50%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L ++  A  + R+ +     +LD+G G G + L +L+ +P  KG+GVD+  + L   +  
Sbjct: 28  LSETRAAQLVARLTRNTPKTVLDIGCGWGELMLRVLEAAPRAKGIGVDLDAEDLSRGRRA 87

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A   G++ R   ++     +  G  D+++
Sbjct: 88  AEQRGLTTRARFVEESATGTTRGPADLVL 116


>gi|300214333|gb|ADJ78749.1| Methyltransferase [Lactobacillus salivarius CECT 5713]
          Length = 252

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 13/117 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  SS+ F    +  LL D A +       K+   +I+DL  G GAV L  L +    
Sbjct: 20  IKIIQSSEVFSFSIDAILLADFADSL------KKKNSKIVDLCAGNGAVGL-FLSQKVNG 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174
           K + V+I  +  ++A+ + + N + ++   L  D  ++++GL      D++V NPPY
Sbjct: 73  KIIQVEIQKRLADMARRSILLNNLEDKITILNED-LNNLQGLISKDSVDMVVCNPPY 128


>gi|294979860|pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
 gi|294979861|pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
          Length = 276

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           E E L  S  A +L ++   D V     ++L+ G G GA  + L K +P  +   +DIS 
Sbjct: 12  EREALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISP 71

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LE A+ N   NG+ +    LQ++ FS
Sbjct: 72  ESLEKARENTEKNGI-KNVKFLQANIFS 98


>gi|42519266|ref|NP_965196.1| methyltransferase [Lactobacillus johnsonii NCC 533]
 gi|81832209|sp|Q74IX0|PRMA_LACJO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|41583554|gb|AAS09162.1| probable methyltransferase [Lactobacillus johnsonii NCC 533]
          Length = 315

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N + +  D  +++  
Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             ++  +D+IV+N      ++ D L   + D D  ++ +G I
Sbjct: 237 KDIDEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272


>gi|10956197|ref|NP_051026.1| type IC modification subunit [Streptococcus thermophilus]
 gi|6137148|gb|AAF04357.1| type IC modification subunit [Streptococcus thermophilus]
          Length = 531

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L + +       V   G +++     +A+ N + +GV  ER
Sbjct: 213 ESRVPFHIYDPAMGSGSLMLNIRRYLIHPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +V NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVVMNPPY 302


>gi|330752034|emb|CBL80546.1| RNA methyltransferase [uncultured Flavobacteria bacterium]
          Length = 484

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 62  NVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           N  +++ S  F+  P++ E L    + ++L + E  D   ++DL  GTG +   L   S 
Sbjct: 300 NFEISMKS-FFQTNPKSAEKLYLKVIEYALEKKEAIDNTIVMDLFCGTGTIGQILASRST 358

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147
             K +GVDI   A+  AK NA  N + 
Sbjct: 359 NAKIIGVDIVASAINDAKKNAKINNIQ 385


>gi|325847814|ref|ZP_08170036.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480832|gb|EGC83885.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 548

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L  ++K     +LDL +GTG +     K +   K VG++I  +A+E A  NA  N +
Sbjct: 303 AIELANVDKNK--NVLDLYSGTGTITQLFAKAAN--KAVGIEIVEEAVEKAFDNAKENQI 358

Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173
            E  + +  D       V+G +D++V +PP
Sbjct: 359 -ENINFIAGDVLEKIDLVKGKYDIVVLDPP 387


>gi|238758367|ref|ZP_04619545.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC
           35236]
 gi|238703490|gb|EEP96029.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC
           35236]
          Length = 293

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 18/120 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVSER    L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKDQPA 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSR 215
            +    DV+V+N           L   +R+  P IS   + GG  GLS    T A GV++
Sbjct: 221 DLSA--DVVVAN----------ILAGPLRELAPLISVLPVAGGHLGLSGVLATQAVGVAQ 268


>gi|209696241|ref|YP_002264171.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida
           LFI1238]
 gi|226706548|sp|B6ENA3|PRMA_ALISL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|208010194|emb|CAQ80521.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida
           LFI1238]
          Length = 294

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 14/90 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAINVMLDPGLAFGTGTHATTALCLEWLESIDLTGKTVIDFGCGSGILAIAAIKLGA 182

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             K VG+DI  +A+  +K NA  NGV+E+ 
Sbjct: 183 A-KVVGIDIDPQAITASKDNATRNGVAEQL 211


>gi|154250010|ref|YP_001410835.1| hypothetical protein Fnod_1331 [Fervidobacterium nodosum Rt17-B1]
 gi|154153946|gb|ABS61178.1| conserved hypothetical protein [Fervidobacterium nodosum Rt17-B1]
          Length = 182

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 4/75 (5%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFS 159
           D+  G+G+V   +L      + V VD+S KA+   K NA   G+ ++    + D   +  
Sbjct: 46  DVCCGSGSVGFEMLSNGAK-EVVFVDVSNKAISTVKENAKNLGLDDKIKIYKEDVRRFLE 104

Query: 160 SVEGLFDVIVSNPPY 174
           S   +FD+I S+PPY
Sbjct: 105 SYGNVFDIIYSDPPY 119


>gi|71282529|ref|YP_271142.1| ribosomal RNA small subunit methyltransferase C [Colwellia
           psychrerythraea 34H]
 gi|123630908|sp|Q47VN0|RSMC_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|71148269|gb|AAZ28742.1| ribosomal RNA small subunit methyltransferase C [Colwellia
           psychrerythraea 34H]
          Length = 357

 Score = 39.7 bits (91), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 35/146 (23%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV---DISCKALEIAK 138
           +D   A  L  +  +   ++LD G G G +   + K+   F G  +   D+S  AL  A+
Sbjct: 201 LDVGTALLLSNLPSKMTGKVLDFGCGAGVISCFIGKK---FSGTNLSLLDVSALALTSAQ 257

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            +   NG+S   +   S+  S V   +  +VSNPP+ + V                    
Sbjct: 258 ESLALNGLSG--NVFPSNSLSDVNEHYQHVVSNPPFHQGV-------------------- 295

Query: 199 GIDGLSHYRTIAD---GVSRHLNKDG 221
                +HY+   D   G+++ LNK G
Sbjct: 296 ----KTHYQASEDFLAGINKKLNKQG 317


>gi|297623439|ref|YP_003704873.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera
           radiovictrix DSM 17093]
 gi|297164619|gb|ADI14330.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera
           radiovictrix DSM 17093]
          Length = 270

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LD+ TGT  + LAL +  P  + VGVD +   L I +  A   G+S R +       
Sbjct: 64  LRVLDVATGTADLALALKRARPQAEVVGVDFAEPMLAIGRRKARARGLSVRLELGDGLAL 123

Query: 159 SSVEGLFDVIV 169
              +  FDV+ 
Sbjct: 124 PYGDAQFDVVT 134


>gi|258509976|ref|YP_003175639.1| Type I restriction modification system protein HsdMI, M subunit
           [Lactobacillus rhamnosus Lc 705]
 gi|257152817|emb|CAR91788.1| Type I restriction-modification system, M subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 540

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 98  VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148
           V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS       
Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPSLVSYHGQELNTTTFNLARMNLMLHGVSYDDMHLR 291

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             DTL  DW      LFD +V NPPY
Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|256395760|ref|YP_003117324.1| methylase [Catenulispora acidiphila DSM 44928]
 gi|256361986|gb|ACU75483.1| methylase [Catenulispora acidiphila DSM 44928]
          Length = 215

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 12/115 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +    ++PR +T+LL+D+     L R       R+LDLGTG+GAV +A  +     + 
Sbjct: 4   LFVPPGVYQPRSDTDLLIDALRNERLGRN-----CRVLDLGTGSGAVAVAAARRG--ARV 56

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV-EGLFDVIVSNPPYIES 177
             VDIS +A+     N V   +  RF  ++  D+  ++  G FDV+VSNPPY+ S
Sbjct: 57  TAVDISRRAVATTWVNGV---LHRRFIRVRRGDFLEALGPGRFDVVVSNPPYVPS 108


>gi|332667668|ref|YP_004450456.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336482|gb|AEE53583.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 264

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+G GTG + + L + +       V++   A E A+ N      + R + +     D
Sbjct: 66  RILDIGAGTGIIAIMLGQRNAEAIIHAVEVDDLAFEQAQENMRNAPWANRLEVIHHSIQD 125

Query: 157 WFSSVEGLFDVIVSNPPY 174
           +  +    +D+IVSNPP+
Sbjct: 126 FAETQPQQYDLIVSNPPF 143


>gi|308188308|ref|YP_003932439.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1]
 gi|308058818|gb|ADO10990.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1]
          Length = 293

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 10/65 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------D 151
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVS+R          D
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAKRNGVSDRLSLYLPHQQPD 220

Query: 152 TLQSD 156
            LQ+D
Sbjct: 221 NLQAD 225


>gi|269103477|ref|ZP_06156174.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163375|gb|EEZ41871.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 339

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +ELL+++     LP++  +    +LD G G G +   +  + P       DIS  A+E A
Sbjct: 189 SELLLNN-----LPQLHGK----VLDFGCGAGVIGAVMKAKYPEIDVELCDISALAIESA 239

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K     N ++  F    +D + ++ G +  ++SNPP+
Sbjct: 240 KETFKVNNLTGSFTA--TDVYKTLTGPYQFLISNPPF 274


>gi|293335775|ref|NP_001170403.1| hypothetical protein LOC100384389 [Zea mays]
 gi|224035659|gb|ACN36905.1| unknown [Zea mays]
          Length = 401

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 14/86 (16%)

Query: 74  PRPE-TELLVDSALAFSL---PRIEK-----RDVVR----ILDLGTGTGAVCLALLKESP 120
           P PE T +++D  LAF +   P  +      R+V++    +LD GTGTG + +A LK   
Sbjct: 203 PDPEATNIIIDPGLAFGMGEHPTTKLCLLFLREVIKGGECVLDYGTGTGVLGIAALKMG- 261

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146
             +  G+DI  +A+  A  N + NG+
Sbjct: 262 ATQSTGIDIDPQAIASASENLLLNGL 287


>gi|210134633|ref|YP_002301072.1| type I R-M system M protein [Helicobacter pylori P12]
 gi|210132601|gb|ACJ07592.1| type I R-M system M protein [Helicobacter pylori P12]
          Length = 543

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D  TGTG + +AL  +  +        DIS K+L + K N + N ++    
Sbjct: 226 EPTQSVKIYDPSTGTGTLLMALAHQIGTTSCTLYAQDISQKSLRMLKLNLILNDLTHSLR 285

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174
                +TL + + S    G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECHGKMDYIVSNPPF 315


>gi|145641855|ref|ZP_01797430.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145273477|gb|EDK13348.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.4-21]
          Length = 112

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 29/98 (29%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DI   ALE A+     N +  + +   SD FS +EG FD+I+SNPP+ +          
Sbjct: 2   TDIHAMALESARKTLSENQL--QGEVYASDVFSDIEGKFDLIISNPPFHD---------- 49

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDG 221
                       GID  + YRT+ + +++   HLN+ G
Sbjct: 50  ------------GID--TAYRTVKELITQAKWHLNQGG 73


>gi|292489102|ref|YP_003531989.1| hypothetical protein EAMY_2634 [Erwinia amylovora CFBP1430]
 gi|292900224|ref|YP_003539593.1| methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291200072|emb|CBJ47198.1| putative methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291554536|emb|CBA22118.1| Uncharacterized protein yfiC [Erwinia amylovora CFBP1430]
 gi|312173259|emb|CBX81514.1| Uncharacterized protein yfiC [Erwinia amylovora ATCC BAA-2158]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V R LD+G+G+G + L L + +     +  V++   A   A+ N   +   ++    Q+
Sbjct: 44  NVQRALDIGSGSGLIALMLAQRTADPVQIDAVELDEAAALQAQENVAASPWPDKVRVQQA 103

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   W    E  + +IVSNPPY
Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125


>gi|218884715|ref|YP_002429097.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis
           1221n]
 gi|218766331|gb|ACL11730.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis
           1221n]
          Length = 193

 Score = 39.7 bits (91), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G+G + L  L +    K + +DI   AL   + N V N  + +   L SD   S+
Sbjct: 26  MDLGCGSGVLGLHALLKGYCEKVIFIDIDEDALNTVRENTVLNNAAGKNIILSSDTGISI 85

Query: 162 -EGLFDVIVSNPPYIES 177
            E   D++++NPPY+ +
Sbjct: 86  KESSIDLVLANPPYLPA 102


>gi|332976078|gb|EGK12947.1| UbiE/COQ5 family methyltransferase [Psychrobacter sp. 1501(2011)]
          Length = 185

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 15/97 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD G GTG    AL   +   K +  +DIS K +EIAK+ A+ + + E  + LQ+D F 
Sbjct: 14  VLDYGCGTGTTACAL---AHHVKQIHAIDISLKMIEIAKAKAIMSKI-ENINFLQTDIFD 69

Query: 160 S--VEGLFDVI--------VSNPPYIESVIVDCLGLE 186
                  FD I        VSNP  +   I D L  E
Sbjct: 70  KRYHNDSFDTILAFNMLHTVSNPHEVTQRIHDLLKPE 106


>gi|307289959|ref|ZP_07569887.1| N-6 DNA Methylase [Enterococcus faecalis TX0411]
 gi|306498983|gb|EFM68473.1| N-6 DNA Methylase [Enterococcus faecalis TX0411]
          Length = 330

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 197 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 256

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                 DTL  DW +     FD +V NPPY  +   D   L+   F+
Sbjct: 257 MNIRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 303


>gi|297797749|ref|XP_002866759.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312594|gb|EFH43018.1| ribosomal RNA adenine dimethylase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 376

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL+ +     V V++  + +EI +     +G + +   +Q D   +
Sbjct: 86  VLEIGPGTGNLTMKLLEAAQDV--VAVELDKRMVEILRKRVSDHGFAHKLTIIQKDVLKT 143

Query: 161 VEGLFDVIVSNPPY 174
               FD++V+N PY
Sbjct: 144 DFPQFDLVVANIPY 157


>gi|295692844|ref|YP_003601454.1| ribosomal protein l11 methyltransferase [Lactobacillus crispatus
           ST1]
 gi|312977234|ref|ZP_07788982.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           CTV-05]
 gi|295030950|emb|CBL50429.1| Ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           ST1]
 gi|310895665|gb|EFQ44731.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           CTV-05]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + ++D+GTG+G + +A  K       +  DIS +++  AK NA  N ++    T ++   
Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235

Query: 159 SSVEGLFDVIVSN 171
           + V+G FD+IV+N
Sbjct: 236 ADVKGKFDIIVAN 248


>gi|256843050|ref|ZP_05548538.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus 125-2-CHN]
 gi|256614470|gb|EEU19671.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus 125-2-CHN]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + ++D+GTG+G + +A  K       +  DIS +++  AK NA  N ++    T ++   
Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235

Query: 159 SSVEGLFDVIVSN 171
           + V+G FD+IV+N
Sbjct: 236 ADVKGKFDIIVAN 248


>gi|227879056|ref|ZP_03996946.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|262046024|ref|ZP_06018988.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus MV-3A-US]
 gi|293381313|ref|ZP_06627316.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           214-1]
 gi|227861351|gb|EEJ68980.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|260573983|gb|EEX30539.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus MV-3A-US]
 gi|290922129|gb|EFD99128.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           214-1]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + ++D+GTG+G + +A  K       +  DIS +++  AK NA  N ++    T ++   
Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235

Query: 159 SSVEGLFDVIVSN 171
           + V+G FD+IV+N
Sbjct: 236 ADVKGKFDIIVAN 248


>gi|294630601|ref|ZP_06709161.1| transferase [Streptomyces sp. e14]
 gi|292833934|gb|EFF92283.1| transferase [Streptomyces sp. e14]
          Length = 506

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LD+GTG+G   L   + +   +    D++ +AL I       +G     D  Q
Sbjct: 163 RRPVGSALDVGTGSGIQALHAGRHA--TRVTATDVNPRALHITALTLALSGAPA-ADLRQ 219

Query: 155 SDWFSSV-EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  + EG  FD+IVSNPP+   VI     L  R        DGG+ G    RTI   
Sbjct: 220 GSLFEPLREGETFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTIVQQ 268

Query: 213 VSRHLNKDGLCS 224
               LN+ G   
Sbjct: 269 SGERLNEGGFAQ 280


>gi|256850298|ref|ZP_05555727.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|256712935|gb|EEU27927.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           MV-1A-US]
          Length = 314

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + ++D+GTG+G + +A  K       +  DIS +++  AK NA  N ++    T ++   
Sbjct: 178 MNVVDVGTGSGILAIAASKLGA-TDVLATDISDESMTAAKQNAALNDIN-NIHTQKTSLL 235

Query: 159 SSVEGLFDVIVSN 171
           + V+G FD+IV+N
Sbjct: 236 ADVKGKFDIIVAN 248


>gi|258404841|ref|YP_003197583.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
 gi|257797068|gb|ACV68005.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
          Length = 249

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LDLG G G V   L    P  +  GVD + + +  A+ NA   G+ +R   +++D  
Sbjct: 39  TQVLDLGAGCGVVGFGLALRQPGIQLTGVDCNPEMVAAARENAARLGLEQRAVFVEADAA 98

Query: 159 ---SSVEGL----FDVIVSNPPY 174
               +   L    F ++V NPPY
Sbjct: 99  LVRDTATPLDPESFPLVVCNPPY 121


>gi|227893571|ref|ZP_04011376.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus ultunensis DSM 16047]
 gi|227864623|gb|EEJ72044.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus ultunensis DSM 16047]
          Length = 565

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 21/140 (15%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------- 124
           + P+  +ELL       +L      + + + D   G+G++ L   K      G       
Sbjct: 224 YTPQKVSELLT----KLTLVNKNYPNGMTVYDPAMGSGSLLLNFRKYIEDVGGKENEVIY 279

Query: 125 VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            G +I+     +AK N + +GV          DTL  DW    + +FD +V NPPY +  
Sbjct: 280 YGQEINMSTFNLAKMNMILHGVDSSNQHLRNGDTLDEDWPPLSQTMFDSVVMNPPYSQHW 339

Query: 179 IVDCLGLEVRDFDPRISLDG 198
             +   L+    DPR S  G
Sbjct: 340 SANKGFLQ----DPRFSPYG 355


>gi|170756863|ref|YP_001779688.1| hypothetical protein CLD_0725 [Clostridium botulinum B1 str. Okra]
 gi|169122075|gb|ACA45911.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174
             N + E+   ++ D      ++G+   DV+  NPPY
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPY 126


>gi|162447040|ref|YP_001620172.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma
           laidlawii PG-8A]
 gi|161985147|gb|ABX80796.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma
           laidlawii PG-8A]
          Length = 197

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G+G G + + L K  P      +DI+ +ALE+   N   N V       +S+ FS 
Sbjct: 61  LLDVGSGIGVIGIILKKVHPNLDVTQIDINTRALELNIKNNKLNQVETT--VYESNLFSH 118

Query: 161 VEGLFDVIVSNPP 173
           V+  FD IVSNPP
Sbjct: 119 VDKTFDCIVSNPP 131


>gi|169596751|ref|XP_001791799.1| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15]
 gi|160707366|gb|EAT90794.2| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15]
          Length = 830

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 52/183 (28%)

Query: 99  VRILDLGTGTGAVCLALL--------KESPFFKGVGVDISCKALEIAKSN-----AVTNG 145
           +R+LDL TGTG  C+ LL        ++    + + VD+S +AL +A+ N     A   G
Sbjct: 124 LRLLDLCTGTG--CIPLLFRHELYSARQDVHLRALAVDVSEEALALARHNLRSVDASRAG 181

Query: 146 VSE------RFDTLQSDWFSSVEG---------------LFDVIVSNPPYI-ESVIVDCL 183
             +      + D L   +   V G                +D+++SNPPYI  S      
Sbjct: 182 TKQDRIHLLKADVLLDPFADQVTGAPSLKAAMNDYRQPPFWDILISNPPYISPSDYWKTT 241

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              VR ++P+++L                 S H+  D + + +  Y++ +D+ R  E++ 
Sbjct: 242 TRSVRGYEPKLAL-------------VPPQSPHI--DDIQTADAFYSRLLDIARDVEAKI 286

Query: 244 LFL 246
           + L
Sbjct: 287 VLL 289


>gi|9280295|dbj|BAB01750.1| N6-DNA-methyltransferase-like protein [Arabidopsis thaliana]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)

Query: 63  VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
           +RL  S  + +EP  ++  LVD+ LA     IE    +  +++G G+G V  +L+     
Sbjct: 8   IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQN 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           E P    + +D +  A  + K     +GV+   D + +D  + +E    G  DVIV NPP
Sbjct: 67  EVPGVHYLAIDTNPIATRVTKETLEAHGVNA--DVICADLATGLEKRLAGSVDVIVVNPP 124

Query: 174 YIES 177
           Y+ +
Sbjct: 125 YVPT 128


>gi|295425584|ref|ZP_06818271.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295064600|gb|EFG55521.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 205

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P      VD++ + L++AK NA  N + +  +   SD ++ 
Sbjct: 67  ILDVGTGYGPLGLFAAKFWPNQTVEMVDVNERGLKLAKRNAQLNHI-DNVEIYSSDVYAQ 125

Query: 161 VE--GLFDVIVSNPP 173
           V+    F +I++NPP
Sbjct: 126 VDKSKKFGLIITNPP 140


>gi|18309261|ref|NP_561195.1| hypothetical protein CPE0279 [Clostridium perfringens str. 13]
 gi|168207833|ref|ZP_02633838.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
 gi|18143937|dbj|BAB79985.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|170660846|gb|EDT13529.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    S     FDV+  NPPY
Sbjct: 98  KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY 134


>gi|304321920|ref|YP_003855563.1| 50S ribosomal protein L11 methyltransferase [Parvularcula
           bermudensis HTCC2503]
 gi|303300822|gb|ADM10421.1| ribosomal protein L11 methyltransferase, putative [Parvularcula
           bermudensis HTCC2503]
          Length = 297

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
           +L  + K +  R+LDLGTG+G + +A  +  P  + V  DI   ++ IA  NA  N    
Sbjct: 144 ALTALAKGEPRRLLDLGTGSGVLAIAARRLFPEARIVATDIDAPSVAIAAENAALNKAPG 203

Query: 148 ----ERFDTLQSDWFSSVEGLFDVIVSN 171
               E     Q     + EG FD+I++N
Sbjct: 204 IVFLEATGVPQE---VAEEGPFDIILAN 228


>gi|312876839|ref|ZP_07736816.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796354|gb|EFR12706.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 304

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G + +A  K   F   + + VDI   A+++A+ NA  NGV    +  ++D  
Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226

Query: 159 SSVEGLFDVIVSN 171
             +E  FDV+++N
Sbjct: 227 EGIEEKFDVVIAN 239


>gi|298250699|ref|ZP_06974503.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
 gi|297548703|gb|EFH82570.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
          Length = 302

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + DV  ILD+GTGTG   + + +  P    VGVDIS  +LE   S++ T
Sbjct: 75  RPDVTTILDVGTGTGIWPVEMARLFPQAHIVGVDISAASLEFTSSSSYT 123


>gi|242785309|ref|XP_002480568.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218720715|gb|EED20134.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 330

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   FKG  VGVD S K++E+A+
Sbjct: 98  ILDLGTGNGSM-LALLRKRGGFKGVMVGVDYSEKSVELAR 136


>gi|197103170|ref|YP_002128548.1| SAM-dependent methyltransferase [Phenylobacterium zucineum HLK1]
 gi|196480446|gb|ACG79973.1| SAM-dependent methyltransferase [Phenylobacterium zucineum HLK1]
          Length = 233

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 35/72 (48%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+L +G GTGA  L+L    P +  VGVD S + L + +      GV +R + LQ    
Sbjct: 50  ARVLSVGVGTGAEILSLAAAFPGWSFVGVDPSPEMLAVGRRRLEQAGVLQRCELLQGYAG 109

Query: 159 SSVEGLFDVIVS 170
            +    FD  VS
Sbjct: 110 DAPREEFDTAVS 121


>gi|284161197|ref|YP_003399820.1| methylase [Archaeoglobus profundus DSM 5631]
 gi|284011194|gb|ADB57147.1| methylase [Archaeoglobus profundus DSM 5631]
          Length = 183

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 16/106 (15%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P  ++ELL++ AL       E R+   +L++G G+G V   + ++  F   +  DI+
Sbjct: 8   VYPPAEDSELLLEVALR------EVREDDEVLEVGVGSGFVAEKIKEKCQFL--LATDIN 59

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
             A ++A+   +        D +++D    +   F +I+ NPPY+E
Sbjct: 60  PFACKMAREKGI--------DVVRTDLVKGIRKKFTLILFNPPYLE 97


>gi|269966803|ref|ZP_06180876.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B]
 gi|269828470|gb|EEZ82731.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLVADVVVAN 231


>gi|302549517|ref|ZP_07301859.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM
           40736]
 gi|302467135|gb|EFL30228.1| methyltransferase type 11 [Streptomyces viridochromogenes DSM
           40736]
          Length = 288

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 10/97 (10%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP  +LLV++        +      R+LD+G GTG +  A+ +       VGVDIS   +
Sbjct: 40  RPFEDLLVEA--------MASERAGRVLDVGCGTGGITRAVARR--VGPCVGVDISGPMI 89

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           E A++ A   GV   F    +   +   G FD ++S 
Sbjct: 90  EAARAWAEREGVPASFVRADAQEHAFEPGTFDAVISR 126


>gi|168026308|ref|XP_001765674.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683100|gb|EDQ69513.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 284

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVG 126
           D +EP  ++  LVD+ LA     +E+R  +  L++G G+G V  +L   L +    +   
Sbjct: 53  DVYEPCDDSFALVDALLADKANLVERRPKL-CLEVGCGSGYVITSLALILADECHAQFFA 111

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            DIS  A ++ +     +G+  + D + +D    +E    G  DV++ NPPY+ +
Sbjct: 112 TDISQTAAQVTRETLSAHGL--QADVVVTDLVHGLEKRLAGSVDVLLFNPPYVPT 164


>gi|91228891|ref|ZP_01262793.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus
           12G01]
 gi|91187556|gb|EAS73886.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus
           12G01]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLVADVVVAN 231


>gi|51012781|gb|AAT92684.1| YIL064W [Saccharomyces cerevisiae]
          Length = 257

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG+G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGSGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWKPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V R L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VERILKKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|304396992|ref|ZP_07378872.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB]
 gi|304355788|gb|EFM20155.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB]
          Length = 293

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 10/65 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------D 151
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVS+R          D
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPHQQPD 220

Query: 152 TLQSD 156
            LQ+D
Sbjct: 221 NLQAD 225


>gi|294851395|ref|ZP_06792068.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL
           07-0026]
 gi|294819984|gb|EFG36983.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL
           07-0026]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|283477517|emb|CAY73433.1| Uncharacterized protein yfiC [Erwinia pyrifoliae DSM 12163]
          Length = 245

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V R LD+G+G+G + L L + +     +  V++   A   A+ N   +   ++    Q+
Sbjct: 44  NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVQQA 103

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   W    E  + +IVSNPPY
Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125


>gi|261381312|ref|ZP_05985885.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703]
 gi|284795802|gb|EFC51149.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|168211815|ref|ZP_02637440.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170710232|gb|EDT22414.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    + +   FDV+  NPPY
Sbjct: 98  KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY 134


>gi|110800155|ref|YP_694735.1| hypothetical protein CPF_0275 [Clostridium perfringens ATCC 13124]
 gi|110674802|gb|ABG83789.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
          Length = 249

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 33  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    + +   FDV+  NPPY
Sbjct: 91  KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY 127


>gi|254718208|ref|ZP_05180019.1| methyltransferase [Brucella sp. 83/13]
 gi|265983165|ref|ZP_06095900.1| methyltransferase small [Brucella sp. 83/13]
 gi|306839948|ref|ZP_07472742.1| methyltransferase small [Brucella sp. NF 2653]
 gi|264661757|gb|EEZ32018.1| methyltransferase small [Brucella sp. 83/13]
 gi|306404912|gb|EFM61197.1| methyltransferase small [Brucella sp. NF 2653]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|225077502|ref|ZP_03720701.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens
           NRL30031/H210]
 gi|224951164|gb|EEG32373.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens
           NRL30031/H210]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|212711053|ref|ZP_03319181.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM
           30120]
 gi|212686221|gb|EEB45749.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM
           30120]
          Length = 306

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A+  ++ NA  NGVSER    L  D   
Sbjct: 174 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAILASRDNAERNGVSERLSLYLPKDQPQ 232

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGL-----SHYRTIAD 211
            ++   DV+V+N           L   +R+  P IS+    GG  GL     S   ++AD
Sbjct: 233 DLQA--DVVVAN----------ILAGPLRELAPMISVLPRVGGHLGLSGVLASQAESVAD 280

Query: 212 GVSRHLNKD 220
                 N D
Sbjct: 281 AYRADFNID 289


>gi|182434921|ref|YP_001822640.1| hypothetical protein SGR_1128 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178463437|dbj|BAG17957.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 310

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP   K  V R+LD+G+G G V   L +  P  + V VD +   L+ AK  A   G+S+
Sbjct: 62  GLPTAPK--VRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRAKDRARRLGLSD 119

Query: 149 RFDTLQSD 156
           RF TL+++
Sbjct: 120 RFRTLEAE 127


>gi|148555871|ref|YP_001263453.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas
           wittichii RW1]
 gi|148501061|gb|ABQ69315.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas
           wittichii RW1]
          Length = 408

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L  L  +     +G+ +S + L++A+  A   GVS+R      D + 
Sbjct: 180 RVLDIGCGWGGMAL-YLNRAADVDVLGITLSEEQLKVARERAAAAGVSDRVRFELID-YR 237

Query: 160 SVEGLFDVIVS-------NPPYIESVIVDC 182
           ++EG FD IVS         P  E+  + C
Sbjct: 238 ALEGKFDRIVSVGMFEHVGVPQYETFFMKC 267


>gi|56750156|ref|YP_170857.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
 gi|56685115|dbj|BAD78337.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
          Length = 211

 Score = 39.3 bits (90), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           + + +  +L RI       +LDLG GTG++   L  + P  K  G+DIS   L IA+   
Sbjct: 27  IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKL 86

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                S +  T +++     E  FD+++S 
Sbjct: 87  PD---SVKLQTGEANELPFPEHHFDLVIST 113


>gi|323498781|ref|ZP_08103767.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM
           21326]
 gi|323316143|gb|EGA69168.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM
           21326]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             K +G+DI  +AL  +K NA  NGV+E+ +  L  D  + +  + DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQDQPAGL--IADVVVAN 231


>gi|237744130|ref|ZP_04574611.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|260494285|ref|ZP_05814416.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_33]
 gi|229431359|gb|EEO41571.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|260198431|gb|EEW95947.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_33]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P IE       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIITPYIEGS---VFLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|297618670|ref|YP_003706775.1| hypothetical protein Mvol_0142 [Methanococcus voltae A3]
 gi|297377647|gb|ADI35802.1| protein of unknown function Met10 [Methanococcus voltae A3]
          Length = 411

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157
           ++LD+ + TG   + A +K +       VD+S KALE AK N   NG+ S++++ +  D 
Sbjct: 239 KVLDICSYTGGFAVHAGIKGAEI---TSVDMSEKALEFAKENMELNGIGSDKYNGICGDA 295

Query: 158 FSSVEGL------FDVIVSNPP 173
           FS ++ +      FDV++ +PP
Sbjct: 296 FSIMKEMINRGEKFDVVILDPP 317


>gi|117164676|emb|CAJ88222.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 243

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LDLG GTGA  LALL+ +P  +   VD S   L  A +      V  RF  L ++  
Sbjct: 50  LRVLDLGCGTGASTLALLRAAPRARITAVDASAGMLRRALAKPWPARV--RFLHLTAEEV 107

Query: 159 SSV-EGLFDVIVS 170
           ++  EG FD + +
Sbjct: 108 ATAGEGPFDAVFA 120


>gi|108760929|ref|YP_634776.1| trans-aconitate methyltransferase [Myxococcus xanthus DK 1622]
 gi|108464809|gb|ABF89994.1| trans-aconitate methyltransferase [Myxococcus xanthus DK 1622]
          Length = 255

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R++     ++ DLG GTG +   L +  P  +  GVD S + +E A+  A    V  R
Sbjct: 22  LSRVDAASPSQVADLGCGTGDLTRVLAERWPSAQVSGVDASSEMIEAARRGAPVGSV--R 79

Query: 150 FDTLQ-SDWFSSVEGLFDVIVSN 171
           F+    +DW  S     DV+VSN
Sbjct: 80  FEVADLADWAPSAP--LDVLVSN 100


>gi|23503017|ref|NP_699144.1| methyltransferase [Brucella suis 1330]
 gi|225626534|ref|ZP_03784573.1| methyltransferase [Brucella ceti str. Cudo]
 gi|254705169|ref|ZP_05166997.1| methyltransferase [Brucella suis bv. 3 str. 686]
 gi|254707315|ref|ZP_05169143.1| methyltransferase [Brucella pinnipedialis M163/99/10]
 gi|254709145|ref|ZP_05170956.1| methyltransferase [Brucella pinnipedialis B2/94]
 gi|254713430|ref|ZP_05175241.1| methyltransferase [Brucella ceti M644/93/1]
 gi|254716213|ref|ZP_05178024.1| methyltransferase [Brucella ceti M13/05/1]
 gi|256030670|ref|ZP_05444284.1| methyltransferase [Brucella pinnipedialis M292/94/1]
 gi|256158671|ref|ZP_05456554.1| methyltransferase [Brucella ceti M490/95/1]
 gi|256254075|ref|ZP_05459611.1| methyltransferase [Brucella ceti B1/94]
 gi|256370565|ref|YP_003108076.1| methyltransferase [Brucella microti CCM 4915]
 gi|260169574|ref|ZP_05756385.1| methyltransferase [Brucella sp. F5/99]
 gi|261217987|ref|ZP_05932268.1| methyltransferase small [Brucella ceti M13/05/1]
 gi|261221216|ref|ZP_05935497.1| methyltransferase [Brucella ceti B1/94]
 gi|261314797|ref|ZP_05953994.1| methyltransferase small [Brucella pinnipedialis M163/99/10]
 gi|261316644|ref|ZP_05955841.1| methyltransferase small [Brucella pinnipedialis B2/94]
 gi|261321163|ref|ZP_05960360.1| methyltransferase small [Brucella ceti M644/93/1]
 gi|261755874|ref|ZP_05999583.1| methyltransferase small [Brucella suis bv. 3 str. 686]
 gi|261759101|ref|ZP_06002810.1| methyltransferase small [Brucella sp. F5/99]
 gi|265987716|ref|ZP_06100273.1| methyltransferase [Brucella pinnipedialis M292/94/1]
 gi|265997177|ref|ZP_06109734.1| methyltransferase [Brucella ceti M490/95/1]
 gi|23349058|gb|AAN31059.1| methyltransferase [Brucella suis 1330]
 gi|225618191|gb|EEH15234.1| methyltransferase [Brucella ceti str. Cudo]
 gi|256000728|gb|ACU49127.1| methyltransferase [Brucella microti CCM 4915]
 gi|260919800|gb|EEX86453.1| methyltransferase [Brucella ceti B1/94]
 gi|260923076|gb|EEX89644.1| methyltransferase small [Brucella ceti M13/05/1]
 gi|261293853|gb|EEX97349.1| methyltransferase small [Brucella ceti M644/93/1]
 gi|261295867|gb|EEX99363.1| methyltransferase small [Brucella pinnipedialis B2/94]
 gi|261303823|gb|EEY07320.1| methyltransferase small [Brucella pinnipedialis M163/99/10]
 gi|261739085|gb|EEY27081.1| methyltransferase small [Brucella sp. F5/99]
 gi|261745627|gb|EEY33553.1| methyltransferase small [Brucella suis bv. 3 str. 686]
 gi|262551645|gb|EEZ07635.1| methyltransferase [Brucella ceti M490/95/1]
 gi|264659913|gb|EEZ30174.1| methyltransferase [Brucella pinnipedialis M292/94/1]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|323489776|ref|ZP_08095001.1| putative RNA methyltransferase [Planococcus donghaensis MPA1U2]
 gi|323396514|gb|EGA89335.1| putative RNA methyltransferase [Planococcus donghaensis MPA1U2]
          Length = 453

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +VR  +S+ +F +  P +TE+L   ALA++    E+     ++D   G G + L L + +
Sbjct: 273 DVRFEISARSFYQINPVQTEVLYGQALAYAQLTGEET----VIDAYCGIGTISLFLAQRA 328

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSNPP 173
            F   +GV+I  +A+E AK NA  NG++         + +   W+   +   DV+V +PP
Sbjct: 329 KFV--MGVEIVPQAIEDAKRNAELNGLTNTLFEAGPAEQVIPRWYKEGKKA-DVLVVDPP 385


>gi|312869028|ref|ZP_07729205.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
 gi|311095454|gb|EFQ53721.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
          Length = 253

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 11/117 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VRL  S + F         +D+ L     R  +R  +R +DL  G  A+ L  L +   
Sbjct: 21  DVRLIQSPNCFA------FSLDAVLLADFVRPNQRQRLRTVDLCAGNAAIGL-FLHDKLG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPY 174
            + + V++  +  ++A+ +   NG++ER+  L    +D FS + +   DV++ NPPY
Sbjct: 74  GQFIEVELQPRIADMARRSIELNGLAERYQVLNLDIADVFSVIPKDSADVVLCNPPY 130


>gi|261253767|ref|ZP_05946340.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
 gi|260937158|gb|EEX93147.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
          Length = 376

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQS 155
           ++  +LDLG G G + + + + +P  K   VD S  A+E A+ N + N G     + + +
Sbjct: 230 NLKHVLDLGCGNGVLSVKMGQLNPAIKLTCVDESFMAVESARQNLIQNLGDDREIECIAN 289

Query: 156 DWFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +   ++E    D+I+ NPP+  +  I D +  ++     +I   GG       + +  G 
Sbjct: 290 NCLENLEQNDVDMIMCNPPFHQQQAITDHIAWQMFCDAKQILRVGG-------QLLVIG- 341

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +RHL  DG  +   G   K +V  +  ++K  ++ A K
Sbjct: 342 NRHLGYDGKLARLFG---KSNVKVVAANKKFVILQATK 376


>gi|254700801|ref|ZP_05162629.1| methyltransferase [Brucella suis bv. 5 str. 513]
 gi|261751309|ref|ZP_05995018.1| methyltransferase small [Brucella suis bv. 5 str. 513]
 gi|261741062|gb|EEY28988.1| methyltransferase small [Brucella suis bv. 5 str. 513]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase [Neisseria flavescens
           SK114]
 gi|319639456|ref|ZP_07994206.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102]
 gi|241320556|gb|EER56833.1| ribosomal protein L11 methyltransferase [Neisseria flavescens
           SK114]
 gi|317399351|gb|EFV80022.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILAIAALKLGAG-SAIGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|154506231|ref|ZP_02042969.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149]
 gi|153793730|gb|EDN76150.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149]
          Length = 559

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 10/78 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           + DL +GTG +   L   +P  K V GV+I  +A+E AK NA  NG+S  +F  +  D F
Sbjct: 314 VFDLFSGTGTIAQVL---APVAKQVIGVEIIEEAVEAAKENAAHNGLSNCKF--IAGDVF 368

Query: 159 S---SVEGLFDVIVSNPP 173
                +E   DVIV +PP
Sbjct: 369 KVLDEIEEKPDVIVLDPP 386


>gi|81300217|ref|YP_400425.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
 gi|81169098|gb|ABB57438.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
          Length = 213

 Score = 39.3 bits (90), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           + + +  +L RI       +LDLG GTG++   L  + P  K  G+DIS   L IA+   
Sbjct: 29  IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVKLSGLDISAAMLAIARQKL 88

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                S +  T +++     E  FD+++S 
Sbjct: 89  PD---SVKLQTGEANELPFPEHHFDLVIST 115


>gi|284997868|ref|YP_003419635.1| putative methylase [Sulfolobus islandicus L.D.8.5]
 gi|284445763|gb|ADB87265.1| putative methylase [Sulfolobus islandicus L.D.8.5]
          Length = 207

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G   
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   ++     F  +    +   L   K N + N  S     L  D  S +    FDV +
Sbjct: 54  IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-SNYLGVLNCDLLSCLRKYDFDVAI 112

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
            NPPY          L V +++  I  S  GG DG
Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|255583924|ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus communis]
 gi|223527556|gb|EEF29677.1| n6-DNA-methyltransferase, putative [Ricinus communis]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 8/123 (6%)

Query: 62  NVRLTLS-SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALL 116
            +RL  S  + +EP  ++  LVD+ LA  +  ++    V   ++G G+G V     L L 
Sbjct: 7   QIRLVSSHPEVYEPCDDSFALVDALLADRINLLDHNPKV-CFEVGCGSGYVITSLALMLR 65

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDT-LQSDWFSSVEGLFDVIVSNPPY 174
           ++ P    +  D++  A+ + +     +GV +E   T + S     ++G+ DV+V NPPY
Sbjct: 66  QQIPGVYYIATDLNPHAVRVTRETLEAHGVHAELISTDIASGLEKRLQGMVDVMVVNPPY 125

Query: 175 IES 177
           + +
Sbjct: 126 VPT 128


>gi|307151735|ref|YP_003887119.1| type 11 methyltransferase [Cyanothece sp. PCC 7822]
 gi|306981963|gb|ADN13844.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822]
          Length = 285

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 92  RIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           R E  D++      ILDLG GTG+  L L +  P  + +G+D+S   L +AK  A T G+
Sbjct: 89  RTEAIDIIGGQPRNILDLGCGTGSTTLILKQRFPDAQVMGIDLSPYMLAMAKYKAATAGL 148

Query: 147 S 147
           +
Sbjct: 149 N 149


>gi|119719784|ref|YP_920279.1| putative methylase [Thermofilum pendens Hrk 5]
 gi|119524904|gb|ABL78276.1| putative methylase [Thermofilum pendens Hrk 5]
          Length = 179

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 33/192 (17%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            +EPR +T LL+D      L R  +  V  ++++G G G V +     + +   VGVDI+
Sbjct: 2   VYEPREDTFLLLDC-----LKRGFRGGV--LVEVGCGKGVVSVYASNRADYV--VGVDIA 52

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +A+ +++  A  +      D +Q+D  +   +   DV+ SNPPY        L  + R+
Sbjct: 53  WEAVRLSRELARASKEC-LVDFVQADMLNPFRDSSADVVASNPPY--------LPCDYRE 103

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVR-------I 238
            DP +   GG DG+     +A    R L + G    + S    + + +DV+R       +
Sbjct: 104 -DPLVC--GGEDGVEFSARLAREAFRVLRRSGELFLVASSISNFERLLDVLRGLYASVEV 160

Query: 239 FESRKLFLVNAF 250
            E R+LF    F
Sbjct: 161 AEERRLFFEKLF 172


>gi|78499686|gb|ABB45840.1| hypothetical protein [Eutrema halophilum]
          Length = 310

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL+ +     V V+I  + +EI       +G+ ++   +Q D   +
Sbjct: 77  VLEIGPGTGNLTMKLLEAAQNV--VAVEIDKRMVEILGKRVADHGLEDKLTIIQKDVLKT 134

Query: 161 VEGLFDVIVSNPPY 174
               FD++V+N PY
Sbjct: 135 DFPQFDLVVANIPY 148


>gi|15231240|ref|NP_187952.1| methyltransferase/ nucleic acid binding [Arabidopsis thaliana]
 gi|18377858|gb|AAL67115.1| AT3g13440/MRP15_7 [Arabidopsis thaliana]
 gi|20453313|gb|AAM19895.1| AT3g13440/MRP15_7 [Arabidopsis thaliana]
 gi|332641833|gb|AEE75354.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 278

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)

Query: 63  VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
           +RL  S  + +EP  ++  LVD+ LA     IE    +  +++G G+G V  +L+     
Sbjct: 40  IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQN 98

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           E P    + +D +  A  + K     +GV+   D + +D  + +E    G  DVIV NPP
Sbjct: 99  EVPGVHYLAIDTNPIATRVTKETLEAHGVNA--DVICADLATGLEKRLAGSVDVIVVNPP 156

Query: 174 YIES 177
           Y+ +
Sbjct: 157 YVPT 160


>gi|325284032|ref|YP_004256573.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus
           MRP]
 gi|324315841|gb|ADY26956.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus
           MRP]
          Length = 275

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 13/83 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFD--TLQS 155
           +LD+GTG+G + +A  K        GVDI  + + +A+ NA  NG+S    +FD  TL  
Sbjct: 129 VLDVGTGSGVLAMAAAKLGADLA-YGVDIDPQTIPVARENAAQNGLSAPQAQFDEGTLAQ 187

Query: 156 DWFSSVEGL-------FDVIVSN 171
             F++  G        +DV+V+N
Sbjct: 188 GSFTAPAGHAALAEQGYDVLVAN 210


>gi|260779560|ref|ZP_05888450.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604369|gb|EEX30673.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSSKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +          EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALIASKDNAERNGVADKLEVFLPQ--DQPEGLIADVVVAN 231


>gi|126700177|ref|YP_001089074.1| hypothetical protein CD2559 [Clostridium difficile 630]
 gi|255101721|ref|ZP_05330698.1| hypothetical protein CdifQCD-6_12989 [Clostridium difficile
           QCD-63q42]
 gi|255307590|ref|ZP_05351761.1| hypothetical protein CdifA_13437 [Clostridium difficile ATCC 43255]
 gi|115251614|emb|CAJ69447.1| conserved hypothetical protein [Clostridium difficile]
          Length = 184

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 13/93 (13%)

Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +LDL  GTG++   CL+   +S  F    VDIS ++++I KSN     V      L  D
Sbjct: 44  EVLDLFAGTGSLGIECLSRGAKSCTF----VDISKESIDIVKSNIKKARVESESIILNLD 99

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183
           + ++++ L      FD+I  +PPY +++ ++ +
Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132


>gi|329113330|ref|ZP_08242111.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001]
 gi|326697155|gb|EGE48815.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001]
          Length = 251

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 10/90 (11%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L++G G GA  L LL  +P  +G GV+       +A+ N V N   ++   
Sbjct: 39  VPARKGQHVLEIGCGAGAGLLCLLHRAPTLQGTGVEKESDTATLAQQNMVAN--HQQNIR 96

Query: 153 LQSDWFSSV--------EGLFDVIVSNPPY 174
           + +  F  V        E  FD  ++NPP+
Sbjct: 97  ILNATFPDVFLEDNPLPEQYFDHCMANPPW 126


>gi|319956549|ref|YP_004167812.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
 gi|319418953|gb|ADV46063.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
          Length = 232

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
           ++LD+G G G + L L ++ P  +    +   K LE A  N   NG+         D+  
Sbjct: 31  KLLDVGCGVGIISLLLGRDYPV-EVYLAEKQPKMLEYALHNFTLNGIEAH--AYPGDFLE 87

Query: 159 SSVEGLFDVIVSNPPYIESVIVD 181
           + +E  FD+IVSNPP+ +  +  
Sbjct: 88  AQIEERFDLIVSNPPFYDPRVTQ 110


>gi|293399720|ref|ZP_06643866.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306120|gb|EFE47363.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 198

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 82  VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           VD      L  + KRD ++  ILD+G G G + + +    P      VD++ +A+ +AK 
Sbjct: 41  VDFGTQVFLNTLLKRDELQDTILDVGCGYGPIGIIIKHTYPDKHVEMVDVNPRAIALAKE 100

Query: 140 NAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           NA  N V  +    +SD ++ V G  +  I++NPP
Sbjct: 101 NAKANHVDVQIH--ESDVYAQVTGNTYTDILTNPP 133


>gi|289192748|ref|YP_003458689.1| methyltransferase small [Methanocaldococcus sp. FS406-22]
 gi|288939198|gb|ADC69953.1| methyltransferase small [Methanocaldococcus sp. FS406-22]
          Length = 197

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFD--TLQSDW 157
           ILDLG G G + +AL  E    K V + DI+ +A+++AK N   N + E +D   + SD 
Sbjct: 59  ILDLGCGYGVIGIALADE---VKSVTMADINRRAIKLAKENIKLNNL-EGYDIRVIHSDL 114

Query: 158 FSSV-EGLFDVIVSNPP 173
           + +V +  +D I++NPP
Sbjct: 115 YENVRDREYDKIITNPP 131


>gi|157151004|ref|YP_001449953.1| methyltransferase, putative [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075798|gb|ABV10481.1| methyltransferase, putative [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 179

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LDL  G+G++ +  +        V V+   +A  I   N      S RFD L+ +   
Sbjct: 44  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESTRFDLLKMESAR 102

Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
              ++ G FD+++ +PPY  E V+ D   LE R             D  + L   I GL 
Sbjct: 103 ALDTLTGTFDLVLLDPPYAKEQVVADLEKLEERQLLSQDVLVVCETDKDVELPEEIAGLG 162

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 163 IWKQKIYGISK 173


>gi|52841423|ref|YP_095222.1| hypothetical protein lpg1190 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148358776|ref|YP_001249983.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby]
 gi|52628534|gb|AAU27275.1| SAM-dependent methyltransferase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148280549|gb|ABQ54637.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby]
          Length = 390

 Score = 39.3 bits (90), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LDL T TG   L   K         VD S +A+E AK+NAV N ++   F    +  +
Sbjct: 223 RVLDLYTFTGGFALHAAKAGALHV-TAVDSSVQAIEQAKNNAVLNHLNTIEFIKADAREY 281

Query: 159 SSVEGLFDVIVSNPP 173
             + G +DV++ +PP
Sbjct: 282 LKMAGEYDVVILDPP 296


>gi|332292761|ref|YP_004431370.1| RNA methyltransferase, TrmA family [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332170847|gb|AEE20102.1| RNA methyltransferase, TrmA family [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 470

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERF-----DTL 153
           + DL TGTG +   + K++   K +GV+    A+E AK NA  NG+  +E F        
Sbjct: 327 VYDLYTGTGTIAQFVAKKAR--KVIGVEAVPDAIEAAKENAKLNGIENTEFFVGDMKKVF 384

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
            +D F +  G+ D+I+++PP
Sbjct: 385 NTD-FINTHGVPDIIITDPP 403


>gi|322689524|ref|YP_004209258.1| hypothetical protein BLIF_1341 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691481|ref|YP_004221051.1| hypothetical protein BLLJ_1292 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456337|dbj|BAJ66959.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460860|dbj|BAJ71480.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 200

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 16/87 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L L  ESP      VD++ +A+++  +NA  NG +    T Q D  S+ 
Sbjct: 45  LDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHANAQANGHT-NIHTAQVDESSTP 103

Query: 162 ---------------EGLFDVIVSNPP 173
                          +  FDVI SNPP
Sbjct: 104 LPAENQPAFCETVPSDLTFDVIWSNPP 130


>gi|312875748|ref|ZP_07735743.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311088740|gb|EFQ47189.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2053A-b]
          Length = 204

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P  +   +D++ +AL +AK NA  N + +  +   SD + +
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSRVTMIDVNERALALAKRNAQLNEI-DNVNIFCSDCYRN 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDDQEQFGLILTNPP 138


>gi|326775438|ref|ZP_08234703.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
 gi|326655771|gb|EGE40617.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
          Length = 310

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP   K  V R+LD+G+G G V   L +  P  + V VD +   L+ AK  A   G+S+
Sbjct: 62  GLPTAPK--VRRVLDIGSGPGVVSCLLAEVFPEAEVVAVDATPALLDRAKDRARRLGLSD 119

Query: 149 RFDTLQSD 156
           RF TL+++
Sbjct: 120 RFRTLEAE 127


>gi|212637878|ref|YP_002314398.1| methyltransferase [Anoxybacillus flavithermus WK1]
 gi|212559358|gb|ACJ32413.1| Methyltransferase (UbiE/COQ5 family) [Anoxybacillus flavithermus
           WK1]
          Length = 244

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DL TG G + L L K +   K VGV+I  K  ++AK +   N + ++ + +  D    
Sbjct: 47  LVDLCTGNGVIPLLLSKRTKG-KIVGVEIQEKIYDMAKRSVQYNELEKQIEIIHGDIKHM 105

Query: 161 VEGL----FDVIVSNPPYIES 177
              L    FDV+  NPPY  +
Sbjct: 106 PAYLGHSKFDVVTCNPPYFPT 126


>gi|19173510|ref|NP_597313.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine
           methyltransferase signature [Encephalitozoon cuniculi
           GB-M1]
 gi|19171099|emb|CAD26489.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine
           methyltransferase signature [Encephalitozoon cuniculi
           GB-M1]
          Length = 199

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 10/93 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDL  GTG +  A    SP +  +GVD+   ALEI + N++   ++        D    
Sbjct: 52  ILDLCCGTGMLSFACSYFSPSYI-LGVDLCPVALEIFRQNSLEFQINADLLRCSIDDLIF 110

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + G FD  + NPP+         G ++R  D R
Sbjct: 111 INGRFDTAIINPPF---------GTKIRHADTR 134


>gi|328697680|ref|XP_003240407.1| PREDICTED: hypothetical protein LOC100163046 isoform 2
           [Acyrthosiphon pisum]
          Length = 508

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D   G G+  +   K       + +DI  K +EIA+ NA   GV++R   +  D+F+ 
Sbjct: 342 LIDPFCGAGSNVIQFAKTCELV--IAIDIDPKKIEIARHNAELYGVADRIQFIIGDYFTL 399

Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLN 218
              L  DV+  +PP+    ++D   LE       +   GGI   +S  R I   ++ HL 
Sbjct: 400 APTLKGDVVFLSPPWGGPDLMD---LEEYKLSYIMPEKGGIKQMMSLTRQITSNIALHLP 456

Query: 219 KD 220
           K+
Sbjct: 457 KN 458


>gi|307287470|ref|ZP_07567522.1| N-6 DNA Methylase [Enterococcus faecalis TX0109]
 gi|306501516|gb|EFM70815.1| N-6 DNA Methylase [Enterococcus faecalis TX0109]
          Length = 343

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 27  KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 86

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                 DTL  DW +     FD +V NPPY  +   D   L+   F+
Sbjct: 87  MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 133


>gi|256820983|ref|YP_003142262.1| RNA methyltransferase, TrmA family [Capnocytophaga ochracea DSM
           7271]
 gi|256582566|gb|ACU93701.1| RNA methyltransferase, TrmA family [Capnocytophaga ochracea DSM
           7271]
          Length = 471

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+  AK NA  NG+            + 
Sbjct: 324 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAIADAKDNAFANGIENVTFYVGDMKNIF 381

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F    G  DVI+++PP
Sbjct: 382 NDTFIEENGTPDVIITDPP 400


>gi|192292397|ref|YP_001993002.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
 gi|192286146|gb|ACF02527.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
          Length = 296

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + +A  K +     +  DI  +++ +A+ NA  NGV    + +Q++W +
Sbjct: 157 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 212

Query: 160 -------SVEGLFDVIVSN 171
                  +    FD++++N
Sbjct: 213 GFASPVFAAHAPFDLVLAN 231


>gi|699324|gb|AAA63085.1| u471f [Mycobacterium leprae]
          Length = 125

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 164 LFDVIVS---NPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           L D  +S   NPPY+  + V+   L  EV  +DPR ++ GG DG++    I     R L 
Sbjct: 13  LMDASISLWPNPPYVPDDPVVQSILEPEVTQYDPRHAVFGGPDGMALTADIVGLAGRWLR 72

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
             GL +VE   +  V  + +     LF  V   +D  G  R
Sbjct: 73  PGGLFAVEHDDSTSVPTLDLVYRTDLFDDVLTHRDLAGRPR 113


>gi|39936576|ref|NP_948852.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris CGA009]
 gi|39650432|emb|CAE28955.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 311

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + +A  K +     +  DI  +++ +A+ NA  NGV    + +Q++W +
Sbjct: 172 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 227

Query: 160 -------SVEGLFDVIVSN 171
                  +    FD++++N
Sbjct: 228 GFASPVFAAHAPFDLVLAN 246


>gi|34763572|ref|ZP_00144507.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|237742322|ref|ZP_04572803.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256845601|ref|ZP_05551059.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294785110|ref|ZP_06750398.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27]
 gi|27886761|gb|EAA23899.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|229429970|gb|EEO40182.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256719160|gb|EEU32715.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294486824|gb|EFG34186.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P IE       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---VFLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|300727618|ref|ZP_07061007.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14]
 gi|299775138|gb|EFI71741.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14]
          Length = 273

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 19/120 (15%)

Query: 69  SDTFEP---RPETELLVDSALAFSLPRIEKRDVV------------RILDLGTGTGAVCL 113
           ++TF P   +   E+ +D+  AF     +   ++            RILD G GTG + L
Sbjct: 93  AETFHPEQSKDHIEIGIDAVQAFGTGTHQTTRMIVSALLHMGVHDKRILDCGCGTGILGL 152

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           A  K       VG DI   ++E AK NA  NGV +  +    D    + + G+FD++++N
Sbjct: 153 AASKLGA-KDIVGYDIDEWSVENAKHNAEINGV-KNMEIYHGDANVLNHISGIFDIVLAN 210


>gi|292655251|ref|YP_003535148.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2]
 gi|291370660|gb|ADE02887.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2]
          Length = 208

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +LDLGTGTGA+ LAL  ++   + VG DIS   LE A++ A   G+ 
Sbjct: 47  VLDLGTGTGAIALALAPDAK--RVVGRDISEGMLEQARTKAAEVGIE 91


>gi|218531357|ref|YP_002422173.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
 gi|218523660|gb|ACK84245.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
          Length = 250

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 9/85 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG  TGAV LA+ +     + V V+     + +A+ NA  NG+  R   +++D  + 
Sbjct: 44  LYDLGAATGAVGLAVARLCEVGRVVLVERDPDLVALARENAAANGLDARVAVIEADILAP 103

Query: 161 -----VEGL----FDVIVSNPPYIE 176
                  G+     D++++NPP+ E
Sbjct: 104 GAQRRAAGMEPDSADIVLTNPPFFE 128


>gi|152967304|ref|YP_001363088.1| methylase [Kineococcus radiotolerans SRS30216]
 gi|151361821|gb|ABS04824.1| putative methylase [Kineococcus radiotolerans SRS30216]
          Length = 236

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
           VD+S +A+  A++NA    V  R    + D F  V +  F ++++NPPY+ +   D L  
Sbjct: 58  VDLSHRAVLTARANARLARV--RVQVRRGDLFEPVRDRRFGLVLANPPYVPAA-TDRLP- 113

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                 P  S DGGIDG +    I +GV+  L   G
Sbjct: 114 ---RHRPGRSWDGGIDGRAVLDRICEGVAGVLTPGG 146


>gi|120609940|ref|YP_969618.1| methyltransferase small [Acidovorax citrulli AAC00-1]
 gi|120588404|gb|ABM31844.1| methyltransferase small [Acidovorax citrulli AAC00-1]
          Length = 388

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG V  A+L      + V  D   +AL  A+ N     V    D LQ+D F    
Sbjct: 215 DIGTGTG-VLAAVLARRGVRRVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP-- 271

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           G   ++V NPP++ +     +   V D D  + L G + GL+ +
Sbjct: 272 GRAPLVVCNPPWVPARAAAPVERAVYDEDSGM-LRGFLGGLAEH 314


>gi|42518924|ref|NP_964854.1| hypothetical protein LJ0998 [Lactobacillus johnsonii NCC 533]
 gi|41583210|gb|AAS08820.1| hypothetical protein LJ_0998 [Lactobacillus johnsonii NCC 533]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G+GA+ +  +    + + V VDIS +A ++ K N       ERF  L+     
Sbjct: 44  QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183
           +++ L      FD+I  +PPY +  IV  +
Sbjct: 103 AIKILQDEGKKFDLIFLDPPYAKQKIVKIM 132


>gi|326798466|ref|YP_004316285.1| methyltransferase type 11 [Sphingobacterium sp. 21]
 gi|326549230|gb|ADZ77615.1| Methyltransferase type 11 [Sphingobacterium sp. 21]
          Length = 196

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             + ++ K D+  I DLG G G + +   KE     GVGVDI    ++ A  NA   GVS
Sbjct: 59  LQIAQVNKNDL--IYDLGCGDGRIVITAAKEY-GATGVGVDIDPNRIKEANRNAQKEGVS 115

Query: 148 ERFDTLQSDWF 158
           ++   LQ D F
Sbjct: 116 DKVQFLQQDLF 126


>gi|325285147|ref|YP_004260937.1| RNA methyltransferase, TrmA family [Cellulophaga lytica DSM 7489]
 gi|324320601|gb|ADY28066.1| RNA methyltransferase, TrmA family [Cellulophaga lytica DSM 7489]
          Length = 470

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 15/114 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A+ L +I  RD         + DL TGTG +   + K++   K V
Sbjct: 292 FKINPKSFYQTNSEQAYELYKI-TRDFAELSGDELVYDLYTGTGTIAQFVSKKAK--KVV 348

Query: 126 GVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK+NA  N +            + +  F +  G  DVI+++PP
Sbjct: 349 GIEAVPEAIEDAKANAKHNKIDNTVFYAGDMKKIFNPEFIAQNGTPDVIITDPP 402


>gi|293552874|ref|ZP_06673532.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1039]
 gi|291603008|gb|EFF33202.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1039]
          Length = 186

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +        V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLAEEEQQFDYLFLDPPYAKQKIID 130


>gi|163839486|ref|YP_001623891.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952962|gb|ABY22477.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC
           33209]
          Length = 205

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 5/142 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L  +SP  +   VD++ ++L +   NA   G+     +   +   S
Sbjct: 66  LLDIGCGWGPIALTLALKSPQARIHAVDVNERSLALTAENAAALGLGNVQVSQPDELDPS 125

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +   F  I SNPP    V  D L   +R + PR++  G    +      +D + R + ++
Sbjct: 126 IR--FQTIWSNPPI--RVGKDVLHHILRTWLPRLTPSGTAYLVVQKNLGSDSLQRWITEE 181

Query: 221 GLCSVEIGYNQKVDVVRIFESR 242
               +E+         RI E R
Sbjct: 182 -FADLEVRRFSTAKSFRILEVR 202


>gi|161620078|ref|YP_001593965.1| methyltransferase small [Brucella canis ATCC 23365]
 gi|260567363|ref|ZP_05837833.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|161336889|gb|ABX63194.1| methyltransferase small [Brucella canis ATCC 23365]
 gi|260156881|gb|EEW91961.1| methyltransferase [Brucella suis bv. 4 str. 40]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A+ N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAARGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|149913260|ref|ZP_01901794.1| methyltransferase small [Roseobacter sp. AzwK-3b]
 gi|149813666|gb|EDM73492.1| methyltransferase small [Roseobacter sp. AzwK-3b]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           DF   RL +S    +PR      VD  L A S+P    R    +LDLG G G   L L  
Sbjct: 14  DFLGGRLRIS----QPREGYRAGVDPVLLAASVP---ARAGDTVLDLGCGVGVAGLCLAS 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173
                   G+++ C    +A+ NA  NG++   + +  D     E      F  ++ NPP
Sbjct: 67  RVDGLALAGLELQCAYAALARQNASVNGIT--MEVVTGDVSDMPEQFRQRQFTHVLVNPP 124

Query: 174 YIE 176
           Y +
Sbjct: 125 YFD 127


>gi|315224184|ref|ZP_07866024.1| 23S rRNA (uracil-5-)-methyltransferase [Capnocytophaga ochracea
           F0287]
 gi|314945917|gb|EFS97926.1| 23S rRNA (uracil-5-)-methyltransferase [Capnocytophaga ochracea
           F0287]
          Length = 471

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+  AK NA  NG+            + 
Sbjct: 324 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPEAITDAKDNAFANGIENVTFYVGDMKNIF 381

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F    G  DVI+++PP
Sbjct: 382 NDTFIEENGTPDVIITDPP 400


>gi|293571943|ref|ZP_06682957.1| RNA methyltransferase, RsmD family [Enterococcus faecium E980]
 gi|291607961|gb|EFF37269.1| RNA methyltransferase, RsmD family [Enterococcus faecium E980]
          Length = 186

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +        V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130


>gi|255066137|ref|ZP_05317992.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255049682|gb|EET45146.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FD++V+N
Sbjct: 223 ----QGQFDIVVAN 232


>gi|242240478|ref|YP_002988659.1| MCP methyltransferase, CheR-type [Dickeya dadantii Ech703]
 gi|242132535|gb|ACS86837.1| MCP methyltransferase, CheR-type [Dickeya dadantii Ech703]
          Length = 4483

 Score = 39.3 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 68   SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            SS T +  P  E+     L  ++ RI +    RIL++G G+G +   LL +S ++  +G 
Sbjct: 1028 SSFTGQALPLAEM--QQWLENTVARISRYPSRRILEIGCGSGLILQHLLADSDYY--LGT 1083

Query: 128  DISCKALEIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSN 171
            DIS   L   K  A   G S R    QS  D  + +  G FD ++ N
Sbjct: 1084 DISANTLAKLKKWAAQQGDSHRLVLQQSPADALADLPLGQFDTVILN 1130


>gi|330997886|ref|ZP_08321720.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329569490|gb|EGG51260.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 236

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ILD+GTG+G + + L ++   +  +G+DI  +A+  A  N      S+R      +
Sbjct: 38  DSKYILDIGTGSGLIAIMLAQKCNAYI-IGIDIDEEAVNQATDNGKKTPWSQRLHFEVEN 96

Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             + + +  FD+I  NPP+  + +  C G E R++
Sbjct: 97  ALTYIPQKKFDLITCNPPFFTNSL-QCPG-EKRNY 129


>gi|284165470|ref|YP_003403749.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
 gi|284015125|gb|ADB61076.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
          Length = 266

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LD+G GTG   L   +       VG+D++   LE+A+ NA   G  +  + T  ++  
Sbjct: 46  RVLDVGCGTGNAALTARRSGADV--VGLDLAHDMLELARENAALAGYDDIGWLTGDAEAL 103

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              +G FDV++SN  ++ +      G E+R    R +  GG
Sbjct: 104 PVSDGAFDVVLSNFGHVFAPDSTAAGAELR----RATKSGG 140


>gi|268608561|ref|ZP_06142288.1| methyltransferase small [Ruminococcus flavefaciens FD-1]
          Length = 240

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---LEIAKSNAVTNGVSERFDTLQSD 156
           +  DLGTG G + L + K+ P      VDI   A   L++    + T G+      L+  
Sbjct: 40  KACDLGTGCGIIPLIMQKKLPPQITYAVDIQQGAIDQLKMGMERSETEGIVPICADLKEL 99

Query: 157 WFSSVEGLFDVIVSNPPY 174
           W  +  G  D++  NPPY
Sbjct: 100 WEGAPLGQLDLVTCNPPY 117


>gi|220935907|ref|YP_002514806.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997217|gb|ACL73819.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 426

 Score = 39.3 bits (90), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 35/168 (20%)

Query: 38  LTNAIVRSLKHESIH-RILGWRDFYNVRLTLSSDTF-EPR----PETELLVDSALAFSLP 91
           + +AI+ +L H+++H + + WR+   VR     D +  P     PET  L +    F  P
Sbjct: 140 MQDAILEAL-HKAVHPKAVLWRNDSPVRELEGLDLYMRPALGEVPETVTLTEHGARFHAP 198

Query: 92  RI---------EKRDV----------VRILDLGTGTGAVCL-ALLKESPFFKGVGVDISC 131
            +         ++RD           +++LDL +  GA  + A L  +       VD S 
Sbjct: 199 LLSGQKTGWFFDQRDNRAWLARVSRGMKVLDLFSYVGAWGVQAALNGAESV--TCVDASG 256

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
            ALE   +NA  NGV +R   ++ D F  ++ L      FDV++++PP
Sbjct: 257 DALESMAANAAENGVGDRVSGVKGDAFEVLKQLREDQARFDVVITDPP 304


>gi|312793762|ref|YP_004026685.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180902|gb|ADQ41072.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 304

 Score = 39.3 bits (90), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 7/73 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G + +A  K   F   + + VDI   A+++A+ NA  NGV    +  ++D  
Sbjct: 172 VLDVGTGSGILAIAAKK---FLAKRVLAVDIDEVAVKVAEENARLNGV--EIEIKKNDLV 226

Query: 159 SSVEGLFDVIVSN 171
             +E  FDV+++N
Sbjct: 227 EGIEEKFDVVIAN 239


>gi|298373691|ref|ZP_06983680.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroidetes oral
           taxon 274 str. F0058]
 gi|298274743|gb|EFI16295.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroidetes oral
           taxon 274 str. F0058]
          Length = 477

 Score = 39.3 bits (90), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 17/104 (16%)

Query: 83  DSALAFSLPRIEKRDVVRI------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +S  A++L ++  RD  RI       DL TGTG +   + +++   K +G++   +A+E 
Sbjct: 306 NSRQAYNLYKV-VRDFARIDDRMLVYDLYTGTGTIANFVARKAK--KVIGIEYVPEAIED 362

Query: 137 AKSNAVTNGV--SERF-----DTLQSDWFSSVEGLFDVIVSNPP 173
           AK N+  NG+  +E F     D L S  F    G  DVI+++PP
Sbjct: 363 AKENSAINGIVNTEFFAGDMKDVL-SQSFVDYHGQPDVIITDPP 405


>gi|227551291|ref|ZP_03981340.1| methyltransferase [Enterococcus faecium TX1330]
 gi|257896087|ref|ZP_05675740.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293377504|ref|ZP_06623700.1| RNA methyltransferase, RsmD family [Enterococcus faecium PC4.1]
 gi|227179571|gb|EEI60543.1| methyltransferase [Enterococcus faecium TX1330]
 gi|257832652|gb|EEV59073.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|292643873|gb|EFF61987.1| RNA methyltransferase, RsmD family [Enterococcus faecium PC4.1]
          Length = 186

 Score = 39.3 bits (90), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +        V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLATEKQQFDYLFLDPPYAKQKIID 130


>gi|302530427|ref|ZP_07282769.1| conserved hypothetical protein [Streptomyces sp. AA4]
 gi|302439322|gb|EFL11138.1| conserved hypothetical protein [Streptomyces sp. AA4]
          Length = 245

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           SLPR    D V +LDLG G     +  L   P  + VGVD S  AL  A+S A+  GV++
Sbjct: 35  SLPR---EDAV-VLDLGCGGAEWLIRALDAYPELRAVGVDTSEFALSRARSAAIERGVAD 90

Query: 149 RFDTLQ 154
           R    Q
Sbjct: 91  RLTLHQ 96


>gi|225431251|ref|XP_002267827.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 383

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + L LL+ +   + V V++  + +EI +     +G+ ++   +  D   +
Sbjct: 78  VLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEHGLEDQLTVICKDALKT 135

Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183
               FD++V+N PY I S +V  L
Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159


>gi|134100436|ref|YP_001106097.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005085|ref|ZP_06563058.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133913059|emb|CAM03172.1| glycine sarcosine N-methyltransferase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 568

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +S  +F + +++ R V  +LD+ TGTG   + LL+E   F+ V  D S + L  A SN +
Sbjct: 67  ESEGSFFIDQLKARGVRSVLDVATGTGFHSVRLLEEG--FEAVSADGSPQMLAKAFSNGL 124

Query: 143 TNGVSERFDTLQSDW---FSSVEGLFDVIV 169
           T G       + +DW      V G +D I+
Sbjct: 125 TYG-GHILRVVHADWRWLNRDVHGEYDAII 153


>gi|19704664|ref|NP_604226.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714972|gb|AAL95525.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P IE       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---IFLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|39995555|ref|NP_951506.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|60390515|sp|Q74G05|PRMA_GEOSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|39982318|gb|AAR33779.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|298504561|gb|ADI83284.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           KN400]
          Length = 299

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 27/137 (19%)

Query: 56  GWRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAF-------------SLPRIE 94
           GWR  +       ++ +  + + F P P  +++ +D  +AF             +L  + 
Sbjct: 104 GWRQHFVPTRIGRHLVIKPTWEPFAPEPGDQVIELDPGMAFGTGTHPTTRLCLEALETLG 163

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + D  R+LD+GTG+G + +A ++     + +G DI   A+ +A  N   NGV     T  
Sbjct: 164 RPD--RVLDVGTGSGILAIAAVRLGA-RQVIGTDIDPDAVIVAGENCALNGVEVELVTTP 220

Query: 155 SDWFSSVEGLFDVIVSN 171
               + + G FDV+++N
Sbjct: 221 ---LALIPGRFDVVLAN 234


>gi|23097497|ref|NP_690963.1| hypothetical protein OB0042 [Oceanobacillus iheyensis HTE831]
 gi|22775720|dbj|BAC11998.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 246

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 12/105 (11%)

Query: 84  SALAFSLPRIEKRDVVRI-------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +A AFSL  +   D   I       LDL TG G + L LL      K  GV+I  +   +
Sbjct: 26  TAFAFSLDAVLLADFASIPKKRGAILDLCTGNGVIPL-LLSRKTTAKITGVEIQDRIYSM 84

Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYIES 177
           A+ N   N +  +   +  D     +V G   FD++  NPPY ++
Sbjct: 85  AERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKT 129


>gi|67516749|ref|XP_658260.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4]
 gi|74681487|sp|Q5BFM4|Y0656_EMENI RecName: Full=Uncharacterized methyltransferase AN0656
 gi|40746276|gb|EAA65432.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4]
 gi|259489076|tpe|CBF89047.1| TPA: Uncharacterized methyltransferase AN0656 (EC 2.1.1.-)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5BFM4] [Aspergillus
           nidulans FGSC A4]
          Length = 286

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 11/130 (8%)

Query: 49  ESIHRILGWRDFYNV--RLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILD 103
           E+I     W + Y+       + DTFE +   P    LV +             V++++D
Sbjct: 30  ETIEAYNKWAEVYDTDGNFLQALDTFEMKDLLPRFLCLVQTQTNGKSNMTPGEQVLKLVD 89

Query: 104 LGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           LG GTG   L L K +P   + +G+D S   LE+A+ N    GV    D  +      V 
Sbjct: 90  LGCGTGRNTLQLAKSAPKEAQIIGLDASPGMLEVAEGNLKAQGVMGTVDERR-----VVL 144

Query: 163 GLFDVIVSNP 172
           G++D++   P
Sbjct: 145 GVYDLLSPRP 154


>gi|260464326|ref|ZP_05812518.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum
           WSM2075]
 gi|259029950|gb|EEW31234.1| transcriptional regulator, ArsR family [Mesorhizobium opportunistum
           WSM2075]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145
           A  L  + +R    +LDLGTGTG +       SP ++ G+G+D+S + L +A++N    G
Sbjct: 142 AAMLKLVGRRPFQSMLDLGTGTGRLLEIF---SPLYRRGIGIDMSREMLTVARANLDKAG 198

Query: 146 VSERFDTLQSDWFS 159
           VS      Q D FS
Sbjct: 199 VSN-AQVRQGDIFS 211


>gi|46580744|ref|YP_011552.1| ribosomal protein L11 methyltransferase [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46450164|gb|AAS96812.1| ribosomal protein L11 methyltransferase, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311234458|gb|ADP87312.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris RCH1]
          Length = 283

 Score = 39.3 bits (90), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 96  RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R  +  LDLGTG+G   +  ALL       G G DI   A+E A  N   NGV+E FD +
Sbjct: 148 RAGMSFLDLGTGSGILGIGCALLG----LSGTGTDIDPLAVENADENRHINGVAEAFDVM 203

Query: 154 QSDWFSSVEG-LFDVIVSN 171
                  V G  FDV+++N
Sbjct: 204 AGS-TEVVRGRTFDVVLAN 221


>gi|327438590|dbj|BAK14955.1| SAM-dependent methyltransferase [Solibacillus silvestris StLB046]
          Length = 454

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 17/121 (14%)

Query: 62  NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           NVR  +S+ +F +  P +TE+L   AL ++    +     R++D   G G++ L L +++
Sbjct: 274 NVRFEISARSFYQVNPVQTEVLYKQALDYA----QLTGNERVIDAYCGIGSISLFLAQKA 329

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGL-FDVIVSNP 172
                +GV+I  +A+E AK NA  NG +  +      + +   W+   EG   DV+V +P
Sbjct: 330 GHV--MGVEIVEQAIEDAKRNAALNGFTNTYFEAGPAEEVIPRWYK--EGKEADVLVVDP 385

Query: 173 P 173
           P
Sbjct: 386 P 386


>gi|259907667|ref|YP_002648023.1| Putative enzyme [Erwinia pyrifoliae Ep1/96]
 gi|224963289|emb|CAX54774.1| Putative enzyme [Erwinia pyrifoliae Ep1/96]
          Length = 256

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V R LD+G+G+G + L L + +     +  V++   A   A+ N   +   ++    Q+
Sbjct: 55  NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVQQA 114

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   W    E  + +IVSNPPY
Sbjct: 115 DIVEWTQRCEHRYSLIVSNPPY 136


>gi|209527492|ref|ZP_03275996.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209492100|gb|EDZ92451.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 441

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 6/91 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +  ++  +RILD G GTG+    L++ +P  + +G+D+S  A+  A+     
Sbjct: 73  AAYGFCTGQKPQKTKIRILDAGCGTGSSTEYLIQLNPEAEVLGIDLSSGAIATAQERCRR 132

Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVI 168
           +G+S       +F  +       +EG FD I
Sbjct: 133 SGISTPGTPEPQFQQMSLYDVGQLEGEFDFI 163


>gi|120601968|ref|YP_966368.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris DP4]
 gi|120562197|gb|ABM27941.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfovibrio vulgaris DP4]
          Length = 283

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 96  RDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R  +  LDLGTG+G   +  ALL       G G DI   A+E A  N   NGV+E FD +
Sbjct: 148 RAGMSFLDLGTGSGILGIGCALLG----LSGTGTDIDPLAVENADENRHINGVAEAFDVM 203

Query: 154 QSDWFSSVEG-LFDVIVSN 171
                  V G  FDV+++N
Sbjct: 204 AGS-TEVVRGRTFDVVLAN 221


>gi|50305189|ref|XP_452553.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641686|emb|CAH01404.1| KLLA0C07931p [Kluyveromyces lactis]
          Length = 232

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 29/99 (29%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE----------------TELLVDSALAFSLPRIEKRDVVR 100
           W DFY    +L    FE  PE                 E L+D+   +++     ++   
Sbjct: 18  WDDFY----SLEKQNFEENPEDTGECWFADNDAEEKMVEFLLDNLGEYNI-----KEDSS 68

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIA 137
           ++DLGTG G +   LL+E   FKG  +GVD S K++E A
Sbjct: 69  MIDLGTGNGHLLFTLLEEG--FKGEMIGVDYSEKSVEFA 105


>gi|56751462|ref|YP_172163.1| hypothetical protein syc1453_c [Synechococcus elongatus PCC 6301]
 gi|81298857|ref|YP_399065.1| ubiquinone/menaquinone biosynthesis methylase-like protein
           [Synechococcus elongatus PCC 7942]
 gi|56686421|dbj|BAD79643.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81167738|gb|ABB56078.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
           [Synechococcus elongatus PCC 7942]
          Length = 447

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           ILD+G G+G   L L   +P  + +GVD+S K++E+A+      G  E +F  L  D   
Sbjct: 61  ILDVGCGSGYKTLMLALANPGAEIIGVDLSLKSVELAQERLKFQGFPEVKFYALGLDEIG 120

Query: 160 SVEGLFDVI 168
            +E  FD I
Sbjct: 121 QLEIAFDYI 129


>gi|261364176|ref|ZP_05977059.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC
           25996]
 gi|288567782|gb|EFC89342.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC
           25996]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAAQNNVDAQFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FD++V+N
Sbjct: 223 ----QGQFDIVVAN 232


>gi|212633321|ref|YP_002309846.1| ribosomal protein L11 methyltransferase [Shewanella piezotolerans
           WP3]
 gi|226710113|sp|B8CHY3|PRMA_SHEPW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|212554805|gb|ACJ27259.1| Ribosomal protein L11 methyltransferase [Shewanella piezotolerans
           WP3]
          Length = 293

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     K  GVDI  +A+E +K+NA  NGV ++      +    
Sbjct: 162 VIDFGCGSGILAVAALKLG-AEKVTGVDIDYQAIEASKANAERNGVEDQLALYLPE--DQ 218

Query: 161 VEGLF-DVIVSN 171
            EGL  D++V+N
Sbjct: 219 PEGLIADILVAN 230


>gi|144575060|gb|AAZ43715.2| putative DNA methylase [Mycoplasma synoviae 53]
          Length = 263

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L++GT  GA+ + +   S   K   ++I  KALE+A+ N   N +  + + +  D+    
Sbjct: 55  LEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINVKLNNLENQINLIHGDFNDFY 114

Query: 162 EG-------LFDVIVSNPPY 174
           +         +DVI  NPP+
Sbjct: 115 KNHCNKTLPKYDVIFCNPPF 134


>gi|153801757|ref|ZP_01956343.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122722|gb|EAY41465.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 340

 Score = 39.3 bits (90), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G     + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVFGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|329116119|ref|ZP_08244836.1| type I restriction-modification system, M subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326906524|gb|EGE53438.1| type I restriction-modification system, M subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 531

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +GV  ER
Sbjct: 213 ESRAPFHIYDPAMGSGSLMLNIRRYLINPNQVHYHGQELNTTTFNLARMNLILHGVDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD ++ NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVIMNPPY 302


>gi|315158691|gb|EFU02708.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0312]
          Length = 531

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNIRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|294788574|ref|ZP_06753816.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC
           29453]
 gi|294483451|gb|EFG31136.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC
           29453]
          Length = 296

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156
            +LD G G+G + +A LK        GVDI  +A+  ++ NA  N V   F   DTL   
Sbjct: 166 NVLDYGCGSGILAIAALKLGA-GSATGVDIDPQAIIASQDNATQNHVQAAFYLPDTLP-- 222

Query: 157 WFSSVEGLFDVIVSN 171
                EG FDV+V+N
Sbjct: 223 -----EGQFDVVVAN 232


>gi|325684219|gb|EGD26395.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 314

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 10/103 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + + D+GTG+G + +A  K     K V   DIS +++  AK NA  NG+ +     ++  
Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIQD-IALQKTSL 234

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            + V+G FD+IV+N   +  +++D     +   D  +S DG +
Sbjct: 235 LAGVDGKFDLIVAN--ILAEILLDL----IPQLDSHLSEDGQV 271


>gi|310764826|gb|ADP09776.1| Putative enzyme [Erwinia sp. Ejp617]
          Length = 245

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V R LD+G+G+G + L L + +     +  V++   A   A+ N   +   ++    Q+
Sbjct: 44  NVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKVRVRQA 103

Query: 156 D---WFSSVEGLFDVIVSNPPY 174
           D   W    E  + +IVSNPPY
Sbjct: 104 DIVEWTQRCEHRYSLIVSNPPY 125


>gi|308177328|ref|YP_003916734.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307744791|emb|CBT75763.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 408

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D+    D+GTGTG V  A+L      + +G DI  +A++ A  N    G+S       + 
Sbjct: 229 DLSLAFDIGTGTG-VLSAVLAHRGVKQVIGTDIHQRAVDCANDNFARLGISAAAHAQLTS 287

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   EG   ++V NPP++       L   + D + ++ +               G+  H
Sbjct: 288 MFP--EGRAPLVVCNPPWLPGSAPSTLDAAIYDPESKMLMQ-----------FLRGLPGH 334

Query: 217 LNKDG 221
           L K+G
Sbjct: 335 LTKNG 339


>gi|254439341|ref|ZP_05052835.1| Methyltransferase small domain family [Octadecabacter antarcticus
           307]
 gi|198254787|gb|EDY79101.1| Methyltransferase small domain family [Octadecabacter antarcticus
           307]
          Length = 253

 Score = 39.3 bits (90), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 8/133 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLTL   T   R   + ++ +A       +  R    +L+LG GTGA  L L    
Sbjct: 12  FLGGRLTLQQPTKGYRAGVDPVLLAAA------VRARVGQSVLELGCGTGAALLCLATRV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL-FDVIVSNPPYIES 177
                  V++     +I ++NAV N +     T    D  + +  L FD ++ NPPY E 
Sbjct: 66  SGLGLHAVEVQPHYADICRANAVANHIDAMIWTADLRDLPADLRALTFDHVIVNPPYFER 125

Query: 178 VIVDCLGLEVRDF 190
              +   L  RD 
Sbjct: 126 ASGNSSPLPDRDI 138


>gi|298292298|ref|YP_003694237.1| ArsR family transcriptional regulator [Starkeya novella DSM 506]
 gi|296928809|gb|ADH89618.1| transcriptional regulator, ArsR family [Starkeya novella DSM 506]
          Length = 338

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE  V+SA+   L     + V  +LDLGTGTG +      E    +GVG+D+S + L 
Sbjct: 139 PETE--VESAIKSIL---SGQRVGALLDLGTGTGRILELFADE--MERGVGIDLSAEMLA 191

Query: 136 IAKSNAVTNGV 146
           +A++N    GV
Sbjct: 192 VARANLERAGV 202


>gi|257887591|ref|ZP_05667244.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257823645|gb|EEV50577.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
          Length = 185

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +        V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLATEKQQFDYLFLDPPYAKQKIID 130


>gi|197302048|ref|ZP_03167109.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC
           29176]
 gi|197298857|gb|EDY33396.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC
           29176]
          Length = 559

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 10/78 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           + DL +GTG +   L   +P  K V GV+I  +A+E AK NA+ NG+S  +F  +  D F
Sbjct: 314 VFDLFSGTGTIGQVL---APVAKKVIGVEIIEEAVEAAKENALRNGLSNCKF--IAGDVF 368

Query: 159 S---SVEGLFDVIVSNPP 173
                +E   DVIV +PP
Sbjct: 369 KVLDEIEEKPDVIVLDPP 386


>gi|170039575|ref|XP_001847606.1| prip interacting protein, pimt [Culex quinquefasciatus]
 gi|167863124|gb|EDS26507.1| prip interacting protein, pimt [Culex quinquefasciatus]
          Length = 1016

 Score = 39.3 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 11/135 (8%)

Query: 125  VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY-IESVIVDC 182
            + +DI  K +E+AK NA   GV++R + +  D+ +  + L  D +  +PP+   S + D 
Sbjct: 883  IAIDIDPKKIEMAKHNAAVYGVADRIEFIVGDFLALADRLQADAVFLSPPWGGPSYLKD- 941

Query: 183  LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIGYNQKVDVVRIF 239
               EV D +  +      + +   R I+  V+ +L ++      ++  G N  V++ + F
Sbjct: 942  ---EVYDLEASLIPVPATELMRKARQISPNVALYLPRNSNTQQLTMLAGPNNAVEIEQNF 998

Query: 240  ESRKLFLVNAFKDYG 254
              RKL  + A+  YG
Sbjct: 999  LDRKLIALTAY--YG 1011


>gi|45358902|ref|NP_988459.1| SAM-binding motif-containing protein [Methanococcus maripaludis S2]
 gi|45047768|emb|CAF30895.1| SAM (and some other nucleotide) binding motif [Methanococcus
           maripaludis S2]
          Length = 264

 Score = 39.3 bits (90), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 12/141 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151
           EK D+  +L++GTG+G + + + K   +F+      D     L+IAK N   N ++ + +
Sbjct: 83  EKDDIKDVLEIGTGSGIISILIAK---YFECNVTATDTVSDYLKIAKDNISKNNLTSKIN 139

Query: 152 TLQS------DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204
            + S      D        FD+I+S PPY     V         F   + L  GG  G  
Sbjct: 140 LIDSKGKIIFDIPELKNKKFDLIISYPPYYADNSVASKRSFGGAFASEVELIGGGAYGEV 199

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
             + I +    HLN  G+ ++
Sbjct: 200 FSQKIIEEGMDHLNNGGIVAI 220


>gi|307823227|ref|ZP_07653457.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96]
 gi|307736002|gb|EFO06849.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96]
          Length = 242

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG + L +  +    K   V+++  A + A  N   +   +R + +  D  S
Sbjct: 38  RVLDIGTGTGVLAL-MAAQLGAAKVTAVELTQVAFKEADINFNNSPWVDRLEAVHQDIQS 96

Query: 160 ---SVEGLFDVIVSNPPYIESVI--VDCLGLEVRDFD 191
              +    +D+I+SNPP+ E+ +  VD L    R  D
Sbjct: 97  FALTASRQYDLIISNPPFFENHLKTVDTLRNSARHTD 133


>gi|160913554|ref|ZP_02076245.1| hypothetical protein EUBDOL_00030 [Eubacterium dolichum DSM 3991]
 gi|158434106|gb|EDP12395.1| hypothetical protein EUBDOL_00030 [Eubacterium dolichum DSM 3991]
          Length = 189

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 12/144 (8%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           ++ E   RI+  +  +  R+  + +    RP T+ + ++  +   P     D   ILDL 
Sbjct: 1   MRSEKNMRIVAGK--FGSRVIQAVEGQTTRPTTDKVKEAIFSRIGPYF---DGGSILDLF 55

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164
            G+GA+ L  +        V VD++ KA+    SN    GV +    L+ D+ +++  L 
Sbjct: 56  AGSGAISLEAISRG-MEHAVLVDMNGKAISTITSNIKALGVRDACTVLKMDYKTALHKLE 114

Query: 165 -----FDVIVSNPPYIESVIVDCL 183
                FDV+  +PPY +  I   L
Sbjct: 115 EQKQSFDVVFLDPPYKKQQISSIL 138


>gi|69247256|ref|ZP_00604274.1| Conserved hypothetical protein 95 [Enterococcus faecium DO]
 gi|257878119|ref|ZP_05657772.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257881095|ref|ZP_05660748.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257884758|ref|ZP_05664411.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257889682|ref|ZP_05669335.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257892381|ref|ZP_05672034.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258616379|ref|ZP_05714149.1| methylase, putative [Enterococcus faecium DO]
 gi|260559168|ref|ZP_05831354.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|261207703|ref|ZP_05922388.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289566279|ref|ZP_06446710.1| RsmD family RNA methyltransferase [Enterococcus faecium D344SRF]
 gi|293563699|ref|ZP_06678139.1| putative methyltransferase [Enterococcus faecium E1162]
 gi|293569401|ref|ZP_06680698.1| putative methyltransferase [Enterococcus faecium E1071]
 gi|294615869|ref|ZP_06695711.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1636]
 gi|294617304|ref|ZP_06696945.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1679]
 gi|294623500|ref|ZP_06702348.1| putative methyltransferase [Enterococcus faecium U0317]
 gi|314938775|ref|ZP_07846049.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a04]
 gi|314941125|ref|ZP_07848022.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133C]
 gi|314947924|ref|ZP_07851329.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0082]
 gi|314953021|ref|ZP_07855981.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133A]
 gi|314993350|ref|ZP_07858720.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133B]
 gi|314997589|ref|ZP_07862520.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a01]
 gi|68194929|gb|EAN09398.1| Conserved hypothetical protein 95 [Enterococcus faecium DO]
 gi|257812347|gb|EEV41105.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257816753|gb|EEV44081.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257820596|gb|EEV47744.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257826042|gb|EEV52668.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257828760|gb|EEV55367.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260074925|gb|EEW63241.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|260078086|gb|EEW65792.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289161919|gb|EFD09788.1| RsmD family RNA methyltransferase [Enterococcus faecium D344SRF]
 gi|291587927|gb|EFF19778.1| putative methyltransferase [Enterococcus faecium E1071]
 gi|291591255|gb|EFF22922.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1636]
 gi|291596461|gb|EFF27713.1| RNA methyltransferase, RsmD family [Enterococcus faecium E1679]
 gi|291597094|gb|EFF28297.1| putative methyltransferase [Enterococcus faecium U0317]
 gi|291604277|gb|EFF33771.1| putative methyltransferase [Enterococcus faecium E1162]
 gi|313588306|gb|EFR67151.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a01]
 gi|313592177|gb|EFR71022.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133B]
 gi|313594896|gb|EFR73741.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133A]
 gi|313599985|gb|EFR78828.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133C]
 gi|313641913|gb|EFS06493.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0133a04]
 gi|313645693|gb|EFS10273.1| RNA methyltransferase, RsmD family [Enterococcus faecium TX0082]
          Length = 186

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D   +LDL  G+G + +  +        V VD + +AL
Sbjct: 22  RPTTDKVKESIFNMIGPYF---DGETVLDLFAGSGGLAIEAVSRG-CSHAVCVDKNYQAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVD 181
           +I K N       E+F T++ D   ++E L      FD +  +PPY +  I+D
Sbjct: 78  KIIKENIEITKEPEKFTTIKLDADKAIERLAAEKQQFDYLFLDPPYAKQKIID 130


>gi|326470899|gb|EGD94908.1| hypothetical protein TESG_02408 [Trichophyton tonsurans CBS 112818]
 gi|326478462|gb|EGE02472.1| hypothetical protein TEQG_01508 [Trichophyton equinum CBS 127.97]
          Length = 296

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 23/91 (25%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVT----NGVS-ERFDTL 153
           ILDLGTG G++ L LL+E   F G  VGVD S K++E+A+  A       G+  E +D L
Sbjct: 107 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARRLAGQGEGDGGIRFEVWDIL 165

Query: 154 ---------------QSDWFSSVEGLFDVIV 169
                          + DWF   +G FD+++
Sbjct: 166 DPRHEGDIRSGVFGKEVDWFPFEQGGFDIVL 196


>gi|313891792|ref|ZP_07825397.1| methyltransferase small domain protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119786|gb|EFR42973.1| methyltransferase small domain protein [Dialister microaerophilus
           UPII 345-E]
          Length = 246

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I+ +D  +I DLGTGTG + L LL           +I+    +IAK N 
Sbjct: 33  IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPVMADIAKRNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
             N  ++    L+ D+    E    G F  +V+NPPY
Sbjct: 90  SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPY 126


>gi|313898494|ref|ZP_07832031.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
 gi|312956876|gb|EFR38507.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
          Length = 400

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 5/78 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++D  + TG   L     +   + V VD+S  AL+ A +NA  N +  R   +++D F 
Sbjct: 230 RVMDCFSHTGGFALNAAYGNAS-QVVAVDVSQTALDQAYANAKLNHLENRISFVKADVFK 288

Query: 160 SV----EGLFDVIVSNPP 173
            +    EG FD+IV +PP
Sbjct: 289 YLDTCKEGQFDIIVLDPP 306


>gi|296327942|ref|ZP_06870477.1| RsmD family RNA methyltransferase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154898|gb|EFG95680.1| RsmD family RNA methyltransferase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 182

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P IE       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYIEGS---IFLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|282165451|ref|YP_003357836.1| putative methyltransferase [Methanocella paludicola SANAE]
 gi|282157765|dbj|BAI62853.1| putative methyltransferase [Methanocella paludicola SANAE]
          Length = 220

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 33/55 (60%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +E+    RILD+GTG G + +A+  ++ +    G+D+S   ++IA + A   GV+
Sbjct: 44  LERLPAGRILDVGTGPGRLPIAIASKNKYVHVTGLDLSADMVKIAPALAAKRGVT 98


>gi|282883270|ref|ZP_06291868.1| protein YpsC [Peptoniphilus lacrimalis 315-B]
 gi|281296900|gb|EFA89398.1| protein YpsC [Peptoniphilus lacrimalis 315-B]
          Length = 378

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
           D+S KA+E+AK+N+   G+ E  +  Q D  +  +E  + V+++NPPY E + V
Sbjct: 259 DVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDLEDNYGVLITNPPYGERLAV 312


>gi|257076612|ref|ZP_05570973.1| ribosomal protein L11 methyltransferase [Ferroplasma acidarmanus
           fer1]
          Length = 204

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 9/76 (11%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++DLGTGTG  A+    L  S      G+DI    +EI++ NA     +E  ++      
Sbjct: 58  VIDLGTGTGIFAIGSCYLGAS---HATGIDIDPAMIEISRRNAEPFPCAEFINS----SI 110

Query: 159 SSVEGLFDVIVSNPPY 174
           S V G +D ++ NPP+
Sbjct: 111 SEVHGNYDTVIMNPPF 126


>gi|281411982|ref|YP_003346061.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           naphthophila RKU-10]
 gi|281373085|gb|ADA66647.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           naphthophila RKU-10]
          Length = 220

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           ++LDL TGTG V   L +++P  K  G+D S K LEIA+ 
Sbjct: 41  KVLDLATGTGDVARLLKRKAPHLKITGLDSSSKMLEIAEK 80


>gi|34557787|ref|NP_907602.1| Type I restriction enzyme modification subunit [Wolinella
           succinogenes DSM 1740]
 gi|34483504|emb|CAE10502.1| TYPE I RESTRICTION ENZYME (MODIFICATION SUBUNIT) [Wolinella
           succinogenes]
          Length = 560

 Score = 39.3 bits (90), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 31/194 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGT---------GTGAVCLALLKESPFFKGVGVDISCK 132
           ++    +S P+     ++ +LD+           G G + L+L K S   +  G ++  +
Sbjct: 108 LNKLYVYSTPQEVNELIISLLDIAPKDEVYNPCYGMGTLFLSLSKRSKTIRLFGEELDGR 167

Query: 133 ALEIAKSNAVTNGVSERF----DTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLE 186
             +IAK  A   G+ E      D L+   F + +G   FD IV NPP+        LG+E
Sbjct: 168 LAKIAKLMARVGGIQEMHLFVNDILKKPVFKNEKGFRQFDKIVCNPPF-----SAHLGIE 222

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
               D R S  G +   S           HL + G           V +VR    +K FL
Sbjct: 223 YLKNDERFSRYGILAKSSPELVFLTHALMHLKQRG-----------VFIVRNQTLQKSFL 271

Query: 247 VNAFKDYGGNDRVL 260
               ++    DRV+
Sbjct: 272 EEKLRERMVEDRVI 285


>gi|300814276|ref|ZP_07094548.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511543|gb|EFK38771.1| conserved hypothetical protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 378

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
           D+S KA+E+AK+N+   G+ E  +  Q D  +  +E  + V+++NPPY E + V
Sbjct: 259 DVSYKAIEVAKNNSAILGLDEDINFFQKDIRNLDLEDNYGVLITNPPYGERLAV 312


>gi|268319353|ref|YP_003293009.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
           FI9785]
 gi|262397728|emb|CAX66742.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
           FI9785]
          Length = 315

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N + +  D  +++  
Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +   +D+IV+N      ++ D L   + D D  ++ +G I
Sbjct: 237 KDINEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272


>gi|219558681|ref|ZP_03537757.1| hypothetical protein MtubT1_15792 [Mycobacterium tuberculosis T17]
 gi|289570849|ref|ZP_06451076.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289544603|gb|EFD48251.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
          Length = 250

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107
           +T   D  +P    E+  D  +A  LP     D+                   +LD GTG
Sbjct: 1   MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   +  +   G+D S  A+E A+ NA   GVS  F    +     ++G FD 
Sbjct: 61  PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|221134702|ref|ZP_03561005.1| methyltransferase small [Glaciecola sp. HTCC2999]
          Length = 247

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 6/81 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS---D 156
           ILD+G+G+G + L + ++S     + GV+   K+ E +  N+++   + +   +QS    
Sbjct: 47  ILDIGSGSGVLSLMMAQQSAEHAHITGVETDKKSFEQSIKNSLSTRFNAKIKFVQSRIQH 106

Query: 157 WFSSVEGLFDVIVSNPPYIES 177
           ++SS    + +I+SNPP+ ++
Sbjct: 107 FYSSQR--YHLIISNPPHFQN 125


>gi|88802991|ref|ZP_01118518.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P]
 gi|88781849|gb|EAR13027.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P]
          Length = 485

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 12/114 (10%)

Query: 72  FEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           F+  P+  E L +  + + L    K D   ++DL  GTG +   +  +S   + +GVDI 
Sbjct: 309 FQTNPKCAEKLYNKVVEYVLEDKTKVDNTVVMDLFCGTGTIGQIVASKSKNAQIIGVDIV 368

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY---IESVIVD 181
             A+E A+ NA  N ++         +F++  G F  + S+P Y   I+++I+D
Sbjct: 369 ASAIEDAEKNAKRNNIT------GVQFFAADVGKF--LTSHPEYENKIKTIILD 414


>gi|315152687|gb|EFT96703.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0031]
          Length = 531

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERPFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|88601597|ref|YP_501775.1| hypothetical protein Mhun_0285 [Methanospirillum hungatei JF-1]
 gi|88187059|gb|ABD40056.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
          Length = 242

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 10/104 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++ F   P  EL   + L+F    I  R +  I++LG+GTG     +L + P ++   +D
Sbjct: 37  TNLFRILPNAELFFSTCLSF----IPHRKI-SIMELGSGTGYFTALMLSQYPEYQITCMD 91

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171
            S + LE+AK      G +     ++ D  + + EG +D I+S 
Sbjct: 92  KSPEMLELAKRKEELTGCT----FIEGDITTGLPEGNYDCIIST 131


>gi|15609812|ref|NP_217191.1| hypothetical protein Rv2675c [Mycobacterium tuberculosis H37Rv]
 gi|15842213|ref|NP_337250.1| hypothetical protein MT2749 [Mycobacterium tuberculosis CDC1551]
 gi|31793847|ref|NP_856340.1| hypothetical protein Mb2694c [Mycobacterium bovis AF2122/97]
 gi|121638550|ref|YP_978774.1| hypothetical protein BCG_2688c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662516|ref|YP_001284039.1| hypothetical protein MRA_2703 [Mycobacterium tuberculosis H37Ra]
 gi|148823865|ref|YP_001288619.1| hypothetical protein TBFG_12690 [Mycobacterium tuberculosis F11]
 gi|167970103|ref|ZP_02552380.1| hypothetical protein MtubH3_19538 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404638|ref|ZP_03416819.1| hypothetical protein Mtub0_13320 [Mycobacterium tuberculosis
           02_1987]
 gi|215412473|ref|ZP_03421213.1| hypothetical protein Mtub9_14035 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215412476|ref|ZP_03421216.1| hypothetical protein Mtub9_14050 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428101|ref|ZP_03426020.1| hypothetical protein MtubT9_17593 [Mycobacterium tuberculosis T92]
 gi|215431615|ref|ZP_03429534.1| hypothetical protein MtubE_13273 [Mycobacterium tuberculosis
           EAS054]
 gi|218754412|ref|ZP_03533208.1| hypothetical protein MtubG1_13709 [Mycobacterium tuberculosis GM
           1503]
 gi|224991042|ref|YP_002645731.1| hypothetical protein JTY_2682 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798243|ref|YP_003031244.1| hypothetical protein TBMG_01298 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232782|ref|ZP_04926109.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254551730|ref|ZP_05142177.1| hypothetical protein Mtube_14947 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260187692|ref|ZP_05765166.1| hypothetical protein MtubCP_16914 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201801|ref|ZP_05769292.1| hypothetical protein MtubT4_17325 [Mycobacterium tuberculosis T46]
 gi|260205985|ref|ZP_05773476.1| hypothetical protein MtubK8_16975 [Mycobacterium tuberculosis K85]
 gi|289444217|ref|ZP_06433961.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448330|ref|ZP_06438074.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553539|ref|ZP_06442749.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289575373|ref|ZP_06455600.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746475|ref|ZP_06505853.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289751327|ref|ZP_06510705.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754777|ref|ZP_06514155.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289762846|ref|ZP_06522224.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294994232|ref|ZP_06799923.1| hypothetical protein Mtub2_06888 [Mycobacterium tuberculosis 210]
 gi|297635283|ref|ZP_06953063.1| hypothetical protein MtubK4_14225 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732279|ref|ZP_06961397.1| hypothetical protein MtubKR_14374 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526145|ref|ZP_07013554.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298526147|ref|ZP_07013556.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776955|ref|ZP_07415292.1| hypothetical protein TMAG_03062 [Mycobacterium tuberculosis
           SUMu001]
 gi|306780857|ref|ZP_07419194.1| hypothetical protein TMBG_02812 [Mycobacterium tuberculosis
           SUMu002]
 gi|306785480|ref|ZP_07423802.1| hypothetical protein TMCG_01921 [Mycobacterium tuberculosis
           SUMu003]
 gi|306790078|ref|ZP_07428400.1| hypothetical protein TMDG_00389 [Mycobacterium tuberculosis
           SUMu004]
 gi|306794161|ref|ZP_07432463.1| hypothetical protein TMEG_03352 [Mycobacterium tuberculosis
           SUMu005]
 gi|306807523|ref|ZP_07444191.1| hypothetical protein TMGG_02194 [Mycobacterium tuberculosis
           SUMu007]
 gi|306968733|ref|ZP_07481394.1| hypothetical protein TMIG_02174 [Mycobacterium tuberculosis
           SUMu009]
 gi|306973068|ref|ZP_07485729.1| hypothetical protein TMJG_01658 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080776|ref|ZP_07489946.1| hypothetical protein TMKG_03104 [Mycobacterium tuberculosis
           SUMu011]
 gi|307085368|ref|ZP_07494481.1| hypothetical protein TMLG_02388 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659612|ref|ZP_07816492.1| hypothetical protein MtubKV_14379 [Mycobacterium tuberculosis KZN
           V2475]
 gi|1550716|emb|CAB02328.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882502|gb|AAK47064.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31619441|emb|CAD94879.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494198|emb|CAL72676.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601841|gb|EAY60851.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148506668|gb|ABQ74477.1| hypothetical protein MRA_2703 [Mycobacterium tuberculosis H37Ra]
 gi|148722392|gb|ABR07017.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774157|dbj|BAH26963.1| hypothetical protein JTY_2682 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319746|gb|ACT24349.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289417136|gb|EFD14376.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421288|gb|EFD18489.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438171|gb|EFD20664.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289539804|gb|EFD44382.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289687003|gb|EFD54491.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289691914|gb|EFD59343.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695364|gb|EFD62793.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710352|gb|EFD74368.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|298495939|gb|EFI31233.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298495941|gb|EFI31235.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214612|gb|EFO74011.1| hypothetical protein TMAG_03062 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326258|gb|EFP15109.1| hypothetical protein TMBG_02812 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329863|gb|EFP18714.1| hypothetical protein TMCG_01921 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333429|gb|EFP22280.1| hypothetical protein TMDG_00389 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337496|gb|EFP26347.1| hypothetical protein TMEG_03352 [Mycobacterium tuberculosis
           SUMu005]
 gi|308346118|gb|EFP34969.1| hypothetical protein TMGG_02194 [Mycobacterium tuberculosis
           SUMu007]
 gi|308353696|gb|EFP42547.1| hypothetical protein TMIG_02174 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357542|gb|EFP46393.1| hypothetical protein TMJG_01658 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361490|gb|EFP50341.1| hypothetical protein TMKG_03104 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365097|gb|EFP53948.1| hypothetical protein TMLG_02388 [Mycobacterium tuberculosis
           SUMu012]
 gi|323718735|gb|EGB27896.1| hypothetical protein TMMG_02682 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904289|gb|EGE51222.1| hypothetical protein TBPG_02187 [Mycobacterium tuberculosis W-148]
 gi|328458015|gb|AEB03438.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 250

 Score = 39.3 bits (90), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107
           +T   D  +P    E+  D  +A  LP     D+                   +LD GTG
Sbjct: 1   MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   +  +   G+D S  A+E A+ NA   GVS  F    +     ++G FD 
Sbjct: 61  PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|328697682|ref|XP_001948506.2| PREDICTED: hypothetical protein LOC100163046 isoform 1
           [Acyrthosiphon pisum]
          Length = 520

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D   G G+  +   K       + +DI  K +EIA+ NA   GV++R   +  D+F+ 
Sbjct: 354 LIDPFCGAGSNVIQFAKTCELV--IAIDIDPKKIEIARHNAELYGVADRIQFIIGDYFTL 411

Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLN 218
              L  DV+  +PP+    ++D   LE       +   GGI   +S  R I   ++ HL 
Sbjct: 412 APTLKGDVVFLSPPWGGPDLMD---LEEYKLSYIMPEKGGIKQMMSLTRQITSNIALHLP 468

Query: 219 KD 220
           K+
Sbjct: 469 KN 470


>gi|323966612|gb|EGB62045.1| methyltransferase small domain-containing protein [Escherichia coli
           M863]
 gi|327251870|gb|EGE63556.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           STEC_7v]
          Length = 378

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           ++DLG G G + L LL ++P  K V VD S  A+  +  N  TN     +R + + ++  
Sbjct: 232 VVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSHLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|284164984|ref|YP_003403263.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
 gi|284014639|gb|ADB60590.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
          Length = 219

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 8/74 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDW 157
           +LDLGTGTGA+ LAL  ++   + VG DIS   +E A+  A   G+      + T +   
Sbjct: 46  VLDLGTGTGAIALALAPDAD--RVVGRDISEGMMEEAEQKADDEGLENLEFEYGTFREPE 103

Query: 158 FSSVEGLFDVIVSN 171
           +   +G  DV+ SN
Sbjct: 104 Y---DGPVDVVTSN 114


>gi|227890128|ref|ZP_04007933.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849303|gb|EEJ59389.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 315

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N + +  D  +++  
Sbjct: 179 MSVLDVGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNNI-DNIDVRKANLL 236

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +   +D+IV+N      ++ D L   + D D  ++ +G I
Sbjct: 237 KDINEKYDLIVAN------ILADILLELIPDLDNHLNENGKI 272


>gi|6322125|ref|NP_012200.1| See1p [Saccharomyces cerevisiae S288c]
 gi|731822|sp|P40516|SEE1_YEAST RecName: Full=N-lysine methyltransferase SEE1; AltName:
           Full=Secretion and early endocytosis protein 1
 gi|557805|emb|CAA86159.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285812587|tpg|DAA08486.1| TPA: See1p [Saccharomyces cerevisiae S288c]
          Length = 257

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWKPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V R L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VERILKKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|307176346|gb|EFN65957.1| N(6)-adenine-specific DNA methyltransferase 1 [Camponotus
           floridanus]
          Length = 233

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLAL-LKESPFFKG--VGV 127
           + P  ++ LL+D AL   L  I       I L++G+G+G V  AL +   PF     + +
Sbjct: 17  YNPSEDSYLLID-ALEEDLQNILYATKPAICLEIGSGSGIVITALAMALKPFHNAHFIAI 75

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYI 175
           DI+  A    K  ++ N V    D L  +      V+  +DVI+ NPPY+
Sbjct: 76  DINPDACRATKRTSLINSVD--VDVLHMNLLDCIQVKNTYDVILFNPPYV 123


>gi|108760564|ref|YP_631581.1| putative methyltransferase [Myxococcus xanthus DK 1622]
 gi|108464444|gb|ABF89629.1| putative methyltransferase [Myxococcus xanthus DK 1622]
          Length = 185

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+LDL  GTGA+ L  +      + V VD   +AL + + NA   G++ + + L + 
Sbjct: 43  DGQRVLDLYAGTGALGLEAVSRGA-GQAVLVDQDREALTLCRENAQAVGLAGQVEVLAAP 101

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183
              ++E L      F++I ++PPY   V+   L
Sbjct: 102 VARALETLKRRGDRFELIFADPPYAARVVETVL 134


>gi|90407141|ref|ZP_01215329.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3]
 gi|90311717|gb|EAS39814.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3]
          Length = 230

 Score = 39.3 bits (90), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 19/117 (16%)

Query: 71  TFEPRPE---TELLVDSALAFS----------LPRIEKRDVVR--ILDLGTGTGAVCLAL 115
           +++P P+     +++D  LAF           L  +E +D+    I+D G G+G + +A 
Sbjct: 52  SWKPVPDENAVNVMLDPGLAFGTGTHPTTALCLTWLEGQDLRDKVIIDFGCGSGILAIAA 111

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
           LK     + +G+DI  +A+  ++ NA  NGVS++ +  L  D  + ++   DV+V+N
Sbjct: 112 LKLG-AKRVIGIDIDPQAITASRDNATRNGVSDQLELYLADDLPNGIQA--DVLVAN 165


>gi|46136379|ref|XP_389881.1| hypothetical protein FG09705.1 [Gibberella zeae PH-1]
          Length = 1026

 Score = 39.3 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%)

Query: 68  SSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + D  EP PE E  V    A       + P+ E +   RILD  + +G   L    E PF
Sbjct: 99  NEDAAEPAPEDEPQVTEEAANPDVADPAQPKKEYKPAFRILDALSASGLRALRYAHELPF 158

Query: 122 FKGVGV-DISCKALEIAKSNAVTNGVSERFDTLQSD 156
              V   D+S  A +  + NA  NG+ ++ +  Q D
Sbjct: 159 VTSVKANDLSDTAADSIRMNAKHNGLDDKINVTQGD 194


>gi|310639494|ref|YP_003944252.1| methyltransferase small [Paenibacillus polymyxa SC2]
 gi|309244444|gb|ADO54011.1| Methyltransferase small [Paenibacillus polymyxa SC2]
          Length = 252

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDL TG G V + LL         G++I  +  ++A+ +   NG+ +  +  + D   
Sbjct: 49  KILDLCTGNGVVPI-LLTTRTKASIEGIEIQPRLADMARRSVSLNGLEDAIEIREGDLRE 107

Query: 160 SVE----GLFDVIVSNPPYI 175
            V+    G +D I  NPPY+
Sbjct: 108 LVQITGHGAYDAITVNPPYM 127


>gi|316933204|ref|YP_004108186.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
 gi|315600918|gb|ADU43453.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
          Length = 327

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 11/79 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTGTG + +A  K +     +  DI  +++ +A+ NA  NGV    + +Q++W +
Sbjct: 188 RVLDLGTGTGVLAIAAAK-ALRHTVLATDIDKQSVAVARENARLNGVG---NLVQAEWAT 243

Query: 160 -------SVEGLFDVIVSN 171
                  +    FD++++N
Sbjct: 244 GFASPVFAAHAPFDLVLAN 262


>gi|269966937|ref|ZP_06181009.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           40B]
 gi|269828420|gb|EEZ82682.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           40B]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  +    +LD G G G +   + K +P       DI+  A+  +++    NG+S 
Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD +S     +  IVSNPP+
Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275


>gi|229530429|ref|ZP_04419817.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
 gi|229332202|gb|EEN97690.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
 gi|327483426|gb|AEA77833.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           LMA3894-4]
          Length = 340

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGGVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|229000793|ref|ZP_04160297.1| Methyltransferase [Bacillus mycoides Rock3-17]
 gi|228758956|gb|EEM07998.1| Methyltransferase [Bacillus mycoides Rock3-17]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           ++ + R  GW DF  ++      T+E   E            + R +  DV  +LD+GTG
Sbjct: 10  YDKVGRSNGW-DFSKLKYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166
            G   L +   + F   +G+D S   +E A+SN     VS  RF  ++SD        FD
Sbjct: 56  GGENVLRIAPAALFM--IGIDNSSGMIEKAQSNLEKASVSNVRFFKMESDGLMFPHSFFD 113

Query: 167 VI-VSNPPYIESVIVDCL 183
           ++   + P++ + I   +
Sbjct: 114 IVSCCHAPFVAAEIAKVI 131


>gi|284988732|ref|YP_003407286.1| methyltransferase small [Geodermatophilus obscurus DSM 43160]
 gi|284061977|gb|ADB72915.1| methyltransferase small [Geodermatophilus obscurus DSM 43160]
          Length = 374

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL  +L R+   D    LDLG GTG +  +L    P    +  D S  A+  A   A  N
Sbjct: 219 ALLAALRRMTP-DARTALDLGCGTGVLATSLALARPGLTVLAGDQSAAAVASAAETAAAN 277

Query: 145 GVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
           GV++R   ++ D  SSV +   D++V NPP+
Sbjct: 278 GVADRVRVVRDDAASSVPDTSVDLVVCNPPF 308


>gi|254171789|ref|ZP_04878465.1| methyltransferase [Thermococcus sp. AM4]
 gi|214033685|gb|EEB74511.1| methyltransferase [Thermococcus sp. AM4]
          Length = 210

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLGTGTG  A+   LL      K   V+I  KALE+A+ NA   GV   F       F
Sbjct: 51  VADLGTGTGVLAIGAKLLGAE---KVYAVEIDEKALEVARRNAERAGVDVEFINADVSEF 107

Query: 159 SSVEGLFDVIVSNPPY 174
           +      D ++ NPP+
Sbjct: 108 NE---RVDTVIMNPPF 120


>gi|193215887|ref|YP_001997086.1| type 12 methyltransferase [Chloroherpeton thalassium ATCC 35110]
 gi|193089364|gb|ACF14639.1| Methyltransferase type 12 [Chloroherpeton thalassium ATCC 35110]
          Length = 273

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  +++R V ++LD+ TGTG   + LLK    F+ V VD S   L  A  NA  +G  
Sbjct: 50  FFISALKERGVKKVLDVSTGTGFHSVRLLKAG--FEVVSVDGSADMLAKAFENARKHGYI 107

Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169
            R  T+ +DW      V G +D I+
Sbjct: 108 LR--TVLADWRFLNRDVHGEYDAII 130


>gi|71894318|ref|YP_278426.1| putative DNA methylase [Mycoplasma synoviae 53]
          Length = 258

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L++GT  GA+ + +   S   K   ++I  KALE+A+ N   N +  + + +  D+    
Sbjct: 50  LEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINVKLNNLENQINLIHGDFNDFY 109

Query: 162 EG-------LFDVIVSNPPY 174
           +         +DVI  NPP+
Sbjct: 110 KNHCNKTLPKYDVIFCNPPF 129


>gi|229089986|ref|ZP_04221238.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-42]
 gi|228693333|gb|EEL47042.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-42]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     F   V   G +++     +AK N + +GV +  
Sbjct: 214 ESKKLFSVFDPTMGSGSLMLNIRNYINFPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 IRLRNADTLNKDWPTEEPYTFDSVLMNPPY 303


>gi|261344929|ref|ZP_05972573.1| ribosomal protein L11 methyltransferase [Providencia rustigianii
           DSM 4541]
 gi|282567070|gb|EFB72605.1| ribosomal protein L11 methyltransferase [Providencia rustigianii
           DSM 4541]
          Length = 294

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A+  ++ NA  NGVSER    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAITASRDNAERNGVSERLSLYLAKDQPQ 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            ++   DV+V+N           L   +R+  P IS+
Sbjct: 221 DLQA--DVVVAN----------ILAGPLRELAPMISV 245


>gi|254365337|ref|ZP_04981382.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|134150850|gb|EBA42895.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 19/122 (15%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------------RILDLGTG 107
           +T   D  +P    E+  D  +A  LP     D+                   +LD GTG
Sbjct: 1   MTAQFDPADPTRFEEMYRDDRVAHGLPAATPWDIGGPQPVVQQLVALGAIRGEVLDPGTG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G    A+   +  +   G+D S  A+E A+ NA   GVS  F    +     ++G FD 
Sbjct: 61  PGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDGLDGRFDT 118

Query: 168 IV 169
           +V
Sbjct: 119 VV 120


>gi|257462584|ref|ZP_05626994.1| methyltransferase [Fusobacterium sp. D12]
 gi|317060236|ref|ZP_07924721.1| methyltransferase [Fusobacterium sp. D12]
 gi|313685912|gb|EFS22747.1| methyltransferase [Fusobacterium sp. D12]
          Length = 393

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+ + +G   +A L++    + + +D    AL + + N V NG    F T++ D F
Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAK-EVIAIDKDAHALALCRENYVLNGFHSPFSTMEGDAF 276

Query: 159 SSVEGL------FDVIVSNPP 173
             +E L      F++I  +PP
Sbjct: 277 LLLETLGNRKERFNIITLDPP 297


>gi|269792808|ref|YP_003317712.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100443|gb|ACZ19430.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-- 119
            +R    ++ F PR    + VD+ L  +  R++    ++ L++G   G + L L++ +  
Sbjct: 12  RLRAEQPAEGFGPR----VTVDTILLGAFVRLKGN--LKALEVGCAHGILSLMLIQRARA 65

Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPP 173
                + VG+DI  + +E+A  N   +G++++   +  D      S  E  FD++V NPP
Sbjct: 66  LGANLRVVGIDIQPQLVEMAMRNRDLHGMTDQVRFIPMDLMELKGSWEEAPFDLVVCNPP 125

Query: 174 Y 174
           Y
Sbjct: 126 Y 126


>gi|228472752|ref|ZP_04057510.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624]
 gi|228275803|gb|EEK14569.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624]
          Length = 237

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           ILD+GTGTG + L + +  P      V+   +S K   +  S +  +   E F+    D+
Sbjct: 40  ILDIGTGTGVLSLMMAQRFPLSHIHAVELHPLSAKECRLNVSLSPWHQAVEVFEMDIRDF 99

Query: 158 FSSVEGLFDVIVSNPPY 174
            S+    +D+I+SNPP+
Sbjct: 100 ASTSATAYDLIISNPPF 116


>gi|145347856|ref|XP_001418376.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578605|gb|ABO96669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 865

 Score = 38.9 bits (89), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 14/116 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T LL+ S L    P IE++  +++LD  +G G +  A+  ++   +   +D    ALE A
Sbjct: 702 TTLLLRSVL----PTIERKSKLKVLDYCSGAGQIAAAVRAKAKKSRLWLLDADACALEAA 757

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           K N     +S+  + + SD + ++E     FD+I+SNPP    + VD   + +R+F
Sbjct: 758 KRN-----LSDDVEFILSDGWRALEKSDRAFDLILSNPPVHLGLAVDF--VPIREF 806


>gi|126642861|ref|YP_001085845.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 17978]
          Length = 246

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 51  KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 110

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 111 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 170

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 171 ELDAIVSNPPFHQGI 185


>gi|58337232|ref|YP_193817.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           NCFM]
 gi|227903815|ref|ZP_04021620.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           ATCC 4796]
 gi|81311476|sp|Q5FKI8|PRMA_LACAC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|58254549|gb|AAV42786.1| methyltransferase [Lactobacillus acidophilus NCFM]
 gi|227868702|gb|EEJ76123.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           ATCC 4796]
          Length = 314

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 34/175 (19%)

Query: 56  GWRDFYNV-------RLTLSSDTFEPRPETELLV--DSALAF----------SLPRIEKR 96
            W+ +Y+V        +    + ++P    + L+  D  LAF          ++  IE+ 
Sbjct: 114 AWQKYYHVIDFSRHLAIVPEWEDYQPAFSDQQLIKLDPGLAFGTGNHKTTQLAMMGIERA 173

Query: 97  DV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            V  + ++D+GTG+G + +A  K       +  DIS +++  AK N+  N ++      +
Sbjct: 174 MVKPMSVVDVGTGSGILAIAASKLGAT-NVLATDISDESMTAAKQNSALNNLT-NIKVQK 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-----GIDGLS 204
           +   + VEG FD+IV+N   +  +++D     +   D  ++ DG     GID L 
Sbjct: 232 TSLLAGVEGKFDIIVAN--ILAEILLDL----IPQMDAHLNKDGQVIFSGIDYLQ 280


>gi|54026812|ref|YP_121054.1| hypothetical protein nfa48380 [Nocardia farcinica IFM 10152]
 gi|54018320|dbj|BAD59690.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 383

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 14/108 (12%)

Query: 81  LVDSALAFSLPRIE-------------KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +V    AFS PR++             K D    +DLG GTG + +AL K  P  + VG 
Sbjct: 203 VVAHGAAFSGPRLDIGTRFLLEHLKLMKPDARDAIDLGCGTGILAVALAKARPGLRVVGT 262

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
           D S  A+  A++ A  N V++R   ++ D  SS  +   D+++ NPP+
Sbjct: 263 DQSAAAVASAEATAAANAVADRVRVVRDDAMSSAPDNSADLVLCNPPF 310


>gi|145220570|ref|YP_001131279.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206734|gb|ABP37777.1| 23S rRNA m(5)U-1939 methyltransferase [Chlorobium phaeovibrioides
           DSM 265]
          Length = 484

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDW 157
           R+ DL  GTG + L L + +   + +G+++   +++ A+SNA +NG+     F T   D 
Sbjct: 330 RVYDLYCGTGTITLWLARHAE--RAIGLEVVESSIQDARSNAESNGIGNAYFFQTDLKDL 387

Query: 158 FSSVE-----GLFDVIVSNPP 173
            + +E     G  DVIV++PP
Sbjct: 388 GAMMERLEEHGRPDVIVTDPP 408


>gi|312881561|ref|ZP_07741342.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370764|gb|EFP98235.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 14/157 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSD 156
           +  ++DLG G G + + + + +P  K   VD S  A+  AK N   N   E   D + ++
Sbjct: 232 IKHVIDLGCGNGVLAIKMARLNPGIKLTCVDESFMAIASAKRNLAQNLTEEHDIDLIANN 291

Query: 157 WFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +     DVI+ NPP+  +  I D +  ++     +I   GG       + +  G +
Sbjct: 292 CLDDLNIKNVDVILCNPPFHQQQTITDHIAWQMFCDAKQILKPGG-------QLLVIG-N 343

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           RHL  DG  S   G   K +V  +  ++K  ++ A K
Sbjct: 344 RHLGYDGKLSRLFG---KRNVSVVASNKKFVILQASK 377


>gi|259501367|ref|ZP_05744269.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
 gi|302190912|ref|ZP_07267166.1| Methyltransferase small [Lactobacillus iners AB-1]
 gi|259167220|gb|EEW51715.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
          Length = 204

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTG G + L   K  P      +D++ +AL +AK NA  N + +  +   S+ + S
Sbjct: 65  ILDVGTGYGPLGLFAAKLWPKSHVTMIDVNERALALAKRNAQLNEI-DNVNIFSSECYRS 123

Query: 161 V--EGLFDVIVSNPP 173
           +  +  F +I++NPP
Sbjct: 124 LDEQEQFGLILTNPP 138


>gi|195927220|pdb|2JJQ|A Chain A, The Crystal Structure Of Pyrococcus Abyssi Trna
           (Uracil-54, C5)-Methyltransferase In Complex With
           S-Adenosyl-L- Homocysteine
          Length = 425

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           DP +  D    ++  N     + +  I R  G ++F  +R  L    +   P +    +S
Sbjct: 219 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 275

Query: 85  ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A +L R   E  +  +ILD+ +G G   + L K    F   G D +  A+E+A+ N  
Sbjct: 276 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 333

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            N V   F+ + SD   SV+G FD ++ +PP
Sbjct: 334 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 362


>gi|169350757|ref|ZP_02867695.1| hypothetical protein CLOSPI_01530 [Clostridium spiroforme DSM 1552]
 gi|169292620|gb|EDS74753.1| hypothetical protein CLOSPI_01530 [Clostridium spiroforme DSM 1552]
          Length = 546

 Score = 38.9 bits (89), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP---FFKGVGVD 128
           + P+  +++L   A+A      E +  + + D   G+G++ L   K S      K  G +
Sbjct: 211 YTPQAVSKILTKIAIAGQ----ENKKGLSVYDPCMGSGSLLLNAKKYSKDPRNIKYYGQE 266

Query: 129 ISCKALEIAKSNAVTNGV---SERF---DTLQSDWFSSVEGLFDVIVSNPPY 174
           +      +A+ N   +GV   +++    DTL +DW +  E  FD+++ NPPY
Sbjct: 267 LMTSTYNLARMNMFLHGVVPENQKLRNGDTLDADWPTDEETNFDMVLMNPPY 318


>gi|317123571|ref|YP_004097683.1| methyltransferase type 11 [Intrasporangium calvum DSM 43043]
 gi|315587659|gb|ADU46956.1| Methyltransferase type 11 [Intrasporangium calvum DSM 43043]
          Length = 251

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 101 ILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LDLG+G G  V ++  + +P  K +G+D++ + LE+A++NA   G+         D   
Sbjct: 84  VLDLGSGAGGDVLISAKRVAPGGKAIGIDMTPEMLELARANAREAGI---------DNAE 134

Query: 160 SVEGLFDVIVSNPPYIESVIVDCL 183
            VEG  + I  +   ++ VI +C+
Sbjct: 135 FVEGYLEHIPLDEDSVDVVISNCV 158


>gi|226306448|ref|YP_002766408.1| hypothetical protein RER_29610 [Rhodococcus erythropolis PR4]
 gi|226185565|dbj|BAH33669.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 474

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 11/89 (12%)

Query: 74  PRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           PRP+  L    VD+ LA +L R+  R +V   D+G G G +  AL+  + F K VGVD+S
Sbjct: 267 PRPDPPLARLRVDAVLA-TLQRLHVRTIV---DIGCGEGKLLEALMPHAQFDKLVGVDVS 322

Query: 131 CKALEIA----KSNAVTNGVSERFDTLQS 155
            + L  A    K   +++   ER   +QS
Sbjct: 323 ARELTRAQRRLKFTEMSDVQRERVSLMQS 351


>gi|323481373|gb|ADX80812.1| Type I restriction-modification system methylation subunit
           [Enterococcus faecalis 62]
          Length = 343

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|294670650|ref|ZP_06735526.1| hypothetical protein NEIELOOT_02373 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307620|gb|EFE48863.1| hypothetical protein NEIELOOT_02373 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 295

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+     NAV N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLG-AASAVGVDIDPQAIAAGTGNAVQNRVETKFYLPDELP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----DGQFDVVVAN 232


>gi|195380820|ref|XP_002049159.1| GJ21427 [Drosophila virilis]
 gi|194143956|gb|EDW60352.1| GJ21427 [Drosophila virilis]
          Length = 215

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +   R+LDLG G G   +AL  E  F +  GVD S KA+E+AK  A    ++  +D
Sbjct: 56  KQTARVLDLGCGNGMFLIALANEG-FTQLTGVDYSPKAIELAKGIAKDQALNISYD 110


>gi|194364414|ref|YP_002027024.1| type 11 methyltransferase [Stenotrophomonas maltophilia R551-3]
 gi|194347218|gb|ACF50341.1| Methyltransferase type 11 [Stenotrophomonas maltophilia R551-3]
          Length = 275

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERF 150
           +I+     R+L++G+G GA    LL+  P     GVD+S   L+ A+ N A T   S+R+
Sbjct: 36  QIDYSGARRLLEVGSGVGAQTEILLRRFPELHVTGVDLSETQLQTARENLARTPWCSDRY 95

Query: 151 DTLQSD 156
              Q+D
Sbjct: 96  TLQQAD 101


>gi|15640643|ref|NP_230272.1| hypothetical protein VC0623 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587955|ref|ZP_01677709.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728278|ref|ZP_01681310.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673438|ref|YP_001216116.1| hypothetical protein VC0395_A0151 [Vibrio cholerae O395]
 gi|153818927|ref|ZP_01971594.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822984|ref|ZP_01975651.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080804|ref|YP_002809355.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           M66-2]
 gi|229505754|ref|ZP_04395264.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229509212|ref|ZP_04398697.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229519578|ref|ZP_04409021.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9]
 gi|229608865|ref|YP_002879513.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
 gi|254850856|ref|ZP_05240206.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744159|ref|ZP_05418112.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262155733|ref|ZP_06028857.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
 gi|262169925|ref|ZP_06037615.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|298500740|ref|ZP_07010543.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|81858155|sp|Q9KUA0|RSMC_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712996|sp|A5F942|RSMC_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|9655057|gb|AAF93789.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547802|gb|EAX57890.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629472|gb|EAX61899.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126510544|gb|EAZ73138.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519491|gb|EAZ76714.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315321|gb|ABQ19860.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008692|gb|ACP04904.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           M66-2]
 gi|227012448|gb|ACP08658.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           O395]
 gi|229344267|gb|EEO09242.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9]
 gi|229353784|gb|EEO18720.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229357977|gb|EEO22894.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229371520|gb|ACQ61943.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
 gi|254846561|gb|EET24975.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738099|gb|EET93491.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262021659|gb|EEY40370.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|262030444|gb|EEY49084.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
 gi|297540521|gb|EFH76579.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 340

 Score = 38.9 bits (89), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G+G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                ++ IV+NPP+
Sbjct: 261 DTGHHYNYIVTNPPF 275


>gi|330835225|ref|YP_004409953.1| methyltransferase [Metallosphaera cuprina Ar-4]
 gi|329567364|gb|AEB95469.1| methyltransferase [Metallosphaera cuprina Ar-4]
          Length = 191

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 28/120 (23%)

Query: 74  PRPETEL---LVDSALAFSL-------PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           P+P+ EL   L  S +A ++         IE +   R+ DLG GTG  CL +        
Sbjct: 8   PKPKWELEQYLTPSYIASTIVWTAYVRGEIENK---RVADLGCGTGRFCLGI-------S 57

Query: 124 GVG-----VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            +G     VDI   +LE+AKS   T      F  +++D  +S  G FD  + NPP+  +V
Sbjct: 58  ALGGHCTCVDIDRDSLEVAKSTLRTIDAEAEF--VEAD-CNSFNGRFDTAIQNPPFGNAV 114


>gi|258615581|ref|ZP_05713351.1| hypothetical protein EfaeD_07707 [Enterococcus faecium DO]
          Length = 411

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 9/107 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 96  KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 155

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                 DTL  DW +     FD +V NPPY  +   D   L+   F+
Sbjct: 156 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 202


>gi|302887342|ref|XP_003042559.1| hypothetical protein NECHADRAFT_81086 [Nectria haematococca mpVI
           77-13-4]
 gi|256723471|gb|EEU36846.1| hypothetical protein NECHADRAFT_81086 [Nectria haematococca mpVI
           77-13-4]
          Length = 333

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L  D+ L  S P +    V R+LD+GTGTG   +    E P    +GVD+S         
Sbjct: 81  LTFDNKLGLSPPNLPGSKVKRVLDVGTGTGIWAIDFGDEHPDATVIGVDLSPIQPSFVPP 140

Query: 140 NAVTN--------GVSERFDTLQS--------DWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           N              SE FD + S        +W S +E +F  +     Y+E   VD +
Sbjct: 141 NVQFEIDDIDEEWTYSEPFDYIHSRFMNFSVQNWQSYLEKIFKNLAPG-GYVELQDVDVI 199


>gi|228991705|ref|ZP_04151645.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
 gi|228997806|ref|ZP_04157410.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
 gi|229005345|ref|ZP_04163059.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
 gi|228755875|gb|EEM05206.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
 gi|228761938|gb|EEM10880.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
 gi|228768028|gb|EEM16651.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
          Length = 264

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + +++ R  +R+LD+ TG G V   L   +P FK  V +D++ K LE AK+   TN
Sbjct: 33  LQYVVQQVKNRKNIRLLDIATGGGHVANLL---APIFKEVVALDLTEKMLEKAKAFIQTN 89

Query: 145 G 145
           G
Sbjct: 90  G 90


>gi|221121476|ref|XP_002156231.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 212

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 6/108 (5%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKGVGVDI 129
           +EP  +T LL+D+ L      ++ +  +  L++G+G+G V   LA + E+  F  +  DI
Sbjct: 19  YEPSEDTFLLIDT-LEKEQHILKSQKPLICLEVGSGSGVVITFLAKITENKSFY-IATDI 76

Query: 130 SCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +  A   +K     N V      D+  S     ++G  D+++ NPPY+
Sbjct: 77  NLNACICSKKTGHENNVYVETHCDSFASSMMQRLQGNIDILLFNPPYV 124


>gi|183597992|ref|ZP_02959485.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827]
 gi|188022766|gb|EDU60806.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827]
          Length = 294

 Score = 38.9 bits (89), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  ++ NA  NGVSER    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIIASRDNAERNGVSERLSLYLPKDQPK 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            ++   DV+V+N           L   +R+  P IS+
Sbjct: 221 ELQA--DVVVAN----------ILAGPLRELAPMISV 245


>gi|296110699|ref|YP_003621080.1| hypothetical protein LKI_02840 [Leuconostoc kimchii IMSNU 11154]
 gi|295832230|gb|ADG40111.1| hypothetical protein LKI_02840 [Leuconostoc kimchii IMSNU 11154]
          Length = 514

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVS------ERFD 151
           + D   G+G++ L +  +    K +   G +++     +A+ N + +GVS         D
Sbjct: 221 VYDPAMGSGSLLLTVAGQVTGNKTIAYHGQELNTTTFNLARMNLMLHGVSFEDIHVRNGD 280

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
           TL +DW +     FD +V NPPY
Sbjct: 281 TLDNDWPAQEPYQFDAVVMNPPY 303


>gi|332969290|gb|EGK08317.1| type 12 methyltransferase [Desmospora sp. 8437]
          Length = 213

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 32/46 (69%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ++K   VR++DLG G G +   L+++  F + +G+D+S +ALEIA+
Sbjct: 8   LKKDGAVRVMDLGCGEGRLLKRLVRDKQFQEVLGMDVSPRALEIAE 53


>gi|323492070|ref|ZP_08097232.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG
           20546]
 gi|323313631|gb|EGA66733.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG
           20546]
          Length = 295

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV+++ +          EGL  DV+V+N
Sbjct: 182 AEKVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIADVVVAN 231


>gi|269956054|ref|YP_003325843.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
 gi|269304735|gb|ACZ30285.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
          Length = 210

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 4/94 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + L L   SP      VD+S +AL++ + NA   G++    T   D    
Sbjct: 68  LLDLGCGWGPIALTLATRSPGATVWAVDVSERALDLTRRNAERLGLAN-VRTATPD-AVP 125

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            +  F  I SNPP    V  D L   +R + PR+
Sbjct: 126 ADVRFSAIWSNPPI--RVGKDVLHGMLRTWLPRL 157


>gi|195927327|pdb|2VS1|A Chain A, The Crystal Structure Of Pyrococcus Abyssi Trna
           (Uracil-54, C5)-Methyltransferase In Complex With
           S-Adenosyl-L- Homocysteine
          Length = 425

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           DP +  D    ++  N     + +  I R  G ++F  +R  L    +   P +    +S
Sbjct: 219 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 275

Query: 85  ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A +L R   E  +  +ILD+ +G G   + L K    F   G D +  A+E+A+ N  
Sbjct: 276 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 333

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            N V   F+ + SD   SV+G FD ++ +PP
Sbjct: 334 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 362


>gi|188587917|ref|YP_001922499.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498198|gb|ACD51334.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 250

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DL TGTG +   L  +    +  G++I  + +++A+ +   N + ++   ++ D   
Sbjct: 52  RVIDLCTGTGIIPFLLYGKYNPKEIYGLEIQEEMVKMAEKSVKLNALEDKITIIKED-LK 110

Query: 160 SVEGL-----FDVIVSNPPY 174
           ++E L     FDV+  NPPY
Sbjct: 111 NIEYLKKMDKFDVVTVNPPY 130


>gi|14521283|ref|NP_126758.1| putative RNA methyltransferase [Pyrococcus abyssi GE5]
 gi|50401701|sp|Q9UZR7|Y1078_PYRAB RecName: Full=Uncharacterized RNA methyltransferase PYRAB10780
 gi|5458501|emb|CAB49989.1| RNA methyltransferase, putative [Pyrococcus abyssi GE5]
          Length = 405

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           DP +  D    ++  N     + +  I R  G ++F  +R  L    +   P +    +S
Sbjct: 199 DPTNYFDFDSIYWSVNRSKSDVSYGDIERFWG-KEF--IRERLDDVDYLIHPNSFFQTNS 255

Query: 85  ALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A +L R   E  +  +ILD+ +G G   + L K    F   G D +  A+E+A+ N  
Sbjct: 256 YQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVE 313

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            N V   F+ + SD   SV+G FD ++ +PP
Sbjct: 314 INNVDAEFE-VASDREVSVKG-FDTVIVDPP 342


>gi|298207515|ref|YP_003715694.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus
           HTCC2559]
 gi|83850151|gb|EAP88019.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus
           HTCC2559]
          Length = 236

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 20/153 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G GTG + L + + S   +   V++   A E    N   +   +R     + +   
Sbjct: 38  ILDVGAGTGVIALQMAQRSNAEQIDAVEVDGDAYEQTVENFENSDWGDRLFCYHASFIQL 97

Query: 161 VEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI---DGLSHYRTIADG 212
           VE L     +D+I+ NPP+              D+    S        D L  ++ +  G
Sbjct: 98  VEELEGDEFYDLIICNPPFFS-----------EDYKSNTSQRDQARFQDALP-FQDLISG 145

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           VS+ L+ +G  SV I ++++   + I +   L+
Sbjct: 146 VSKLLSPNGQFSVIIPFSEEQKFIEIAKEHNLY 178


>gi|119384686|ref|YP_915742.1| SAM-dependent methyltransferase [Paracoccus denitrificans PD1222]
 gi|119374453|gb|ABL70046.1| SAM-dependent methyltransferase [Paracoccus denitrificans PD1222]
          Length = 398

 Score = 38.9 bits (89), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  ALE+A+  A   G   R  T Q D F  +E L      FD+++ +PP
Sbjct: 251 VDGSAAALELARGGARAMGAEARLTTRQGDAFEQMEALAAEGAQFDLVICDPP 303


>gi|88860284|ref|ZP_01134922.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas tunicata D2]
 gi|88817482|gb|EAR27299.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas tunicata D2]
          Length = 343

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  +   D   +LD G G G +   L K++P  + + +D+S  A    +   
Sbjct: 188 LDHGTALLLKTMTTPDAGTVLDFGCGAGIISAYLGKKNPKLEFICIDVSAFATTATELTL 247

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             N +  +  TL S+  S ++   + IV+NPP+
Sbjct: 248 AANNI--KGVTLLSNGLSELKDKVNHIVTNPPF 278


>gi|325001248|ref|ZP_08122360.1| ubiquinone/menaquinone biosynthesis methylase [Pseudonocardia sp.
           P1]
          Length = 130

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L  SA    LPR      +R+LD G GTGA   ALL  +P  + V VD S   LE A++ 
Sbjct: 50  LRASAARMRLPRDGA--GLRLLDAGCGTGASTAALLGVAPRAEIVAVDASAGMLERARTK 107

Query: 141 AVTNGVSERFDTLQSDWFSSVE 162
                V+    T    W S+  
Sbjct: 108 PWPGSVTFVHSTADDHWPSTAS 129


>gi|317061082|ref|ZP_07925567.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
 gi|313686758|gb|EFS23593.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
          Length = 313

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N V  E+++ L  +   
Sbjct: 179 VLDVGTGSGILMIVAEKLGARFV-CGVDIDELAVEVAHENLELNAVPKEKYEVLHGNLIE 237

Query: 160 SVEGL-FDVIVSN 171
            +E   +DV+V+N
Sbjct: 238 KIEAKSYDVVVAN 250


>gi|307941570|ref|ZP_07656925.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
 gi|307775178|gb|EFO34384.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
          Length = 217

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +L+LG GTG   +A  K  P  +  G+DIS + L  A+ N    G S R   +Q D
Sbjct: 48  VLELGCGTGRNLIAAAKRYPSAQFFGLDISDQMLATARKNIEKAGYSNRIKLIQGD 103


>gi|299535232|ref|ZP_07048556.1| putative RNA methyltransferase [Lysinibacillus fusiformis ZC1]
 gi|298729353|gb|EFI69904.1| putative RNA methyltransferase [Lysinibacillus fusiformis ZC1]
          Length = 455

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 62  NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +VR  +S+ +F +  PE TE+L   AL ++    + +   R++D   G G + L L +++
Sbjct: 274 DVRFEISARSFYQVNPEQTEVLYKQALDYA----DLQGDERVIDAYCGIGTISLFLAQKA 329

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGL-FDVIVSNP 172
                +GV+I  +A+E AK NA+ NG +  +      + +   W+   EG   DV+V +P
Sbjct: 330 KTV--MGVEIVPQAIEDAKRNALLNGFTNTYFEAGPAEEVIPRWYK--EGKEADVLVVDP 385

Query: 173 P 173
           P
Sbjct: 386 P 386


>gi|257893689|ref|ZP_05673342.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,408]
 gi|257830068|gb|EEV56675.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,408]
          Length = 512

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 196 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 255

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 256 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 285


>gi|194016025|ref|ZP_03054640.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus pumilus ATCC
           7061]
 gi|194012380|gb|EDW21947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus pumilus ATCC
           7061]
          Length = 460

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 81/160 (50%), Gaps = 29/160 (18%)

Query: 35  RFFLTNAIVRSLKHESIHRILG------WRDFY------NVRLTLSSDTF-EPRP-ETEL 80
           RF    +IV+++  +  + I G      W + Y      +++  +S+ +F +  P +T++
Sbjct: 240 RFPHVRSIVQNVNSKKTNVIFGDETTVLWGEEYIYDTIGDIKFAISARSFYQVNPAQTKV 299

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L D AL ++   ++  ++V  +D   G G + L L +++   +  GV+I  +A+E AK N
Sbjct: 300 LYDKALEYA--ELQGEEIV--IDAYCGIGTISLFLAQKAG--RVYGVEIVPEAIEDAKRN 353

Query: 141 AVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           A  N ++         +T+  +W+   EG+  D +V +PP
Sbjct: 354 AALNEINNVEFAVGEAETVIPNWYK--EGIKADTLVVDPP 391


>gi|209550153|ref|YP_002282070.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226710104|sp|B5ZWH3|PRMA_RHILW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|209535909|gb|ACI55844.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 292

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +  R V   LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++   
Sbjct: 147 VRSRPVRNALDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGI 203

Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171
            T  +  F S      G FD+I++N
Sbjct: 204 VTRTAPGFHSTAFSEHGPFDLIIAN 228


>gi|15896660|ref|NP_350009.1| S-adenosylmethionine-dependent methyltransferase [Clostridium
           acetobutylicum ATCC 824]
 gi|15026507|gb|AAK81349.1|AE007839_3 S-adenosylmethionine-dependent methyltransferase [Clostridium
           acetobutylicum ATCC 824]
 gi|325510824|gb|ADZ22460.1| S-adenosylmethionine-dependent methyltransferase [Clostridium
           acetobutylicum EA 2018]
          Length = 207

 Score = 38.9 bits (89), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           + RI + +   +LD+G GTG V L +L +       G+D+S K +EIAK N       + 
Sbjct: 40  IKRILRANPKTVLDVGCGTGNV-LKILAKDENLSLYGLDLSEKMIEIAKKNLKGRAELKL 98

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY 174
            D+    W S+    FDVIV N  +
Sbjct: 99  GDSENMPWKSNS---FDVIVCNASF 120


>gi|331674025|ref|ZP_08374788.1| hypothetical protein ECNG_00610 [Escherichia coli TA280]
 gi|331069298|gb|EGI40690.1| hypothetical protein ECNG_00610 [Escherichia coli TA280]
          Length = 285

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  ++R +   +D
Sbjct: 85  VKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAKRINVHTAD 144

Query: 157 ---WFSSVEGLFDVIVSNPPYIE 176
              W +     FD+I+SNPPY +
Sbjct: 145 IQQWIAQQTVRFDLIISNPPYYQ 167


>gi|322389141|ref|ZP_08062703.1| methyltransferase [Streptococcus parasanguinis ATCC 903]
 gi|321144151|gb|EFX39567.1| methyltransferase [Streptococcus parasanguinis ATCC 903]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS L    P++ KR +  I+DL  G GAV L     +   + +GV+I  +  ++A  + 
Sbjct: 33  VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQILGVEIQERLADMATRSI 89

Query: 142 VTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIE 176
             NG++++   +  D       ++G   D+I+ NPPY +
Sbjct: 90  ALNGLNQQMSMITDDLKHLPRHIKGSKVDIILCNPPYFK 128


>gi|320095377|ref|ZP_08027057.1| transferase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977682|gb|EFW09345.1| transferase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 434

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G   L L       + V  D+S +A  + + NA  NG     D      F  V
Sbjct: 77  LDLGCGCGTQALYLATHC--GRVVATDLSARAGALTQFNAALNGAP--IDVRVGSLFEPV 132

Query: 162 EG-LFDVIVSNPPYI 175
            G  FD+IVSNPP++
Sbjct: 133 SGESFDLIVSNPPFV 147


>gi|312136784|ref|YP_004004121.1| methyltransferase type 11 [Methanothermus fervidus DSM 2088]
 gi|311224503|gb|ADP77359.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088]
          Length = 260

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKAL 134
           E + L D+        + + D + +LD+GTGTG  A+ LA L  S       +D+S + L
Sbjct: 28  EKKWLFDAWKNLLKKVLPEEDNLSVLDIGTGTGFLAIVLAELGHSV----TAIDVSSRML 83

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVS 170
            IAK  A+  G++  F    +   S V    FDV++S
Sbjct: 84  NIAKKRAIQRGLNINFKLEDAMNLSDVYSEDFDVVIS 120


>gi|307325284|ref|ZP_07604487.1| methylase [Streptomyces violaceusniger Tu 4113]
 gi|306889088|gb|EFN20071.1| methylase [Streptomyces violaceusniger Tu 4113]
          Length = 237

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+GA+ L         +   VD+S  A+      A   G+  R   L  D  + 
Sbjct: 54  VLDVGTGSGALALVAAGRG-AAQVTAVDVSPLAVGATWLRARLKGLPVRV--LHGDLLTP 110

Query: 161 VEGL-FDVIVSNPPYIE 176
           V G  FD+IV+NPPY+ 
Sbjct: 111 VAGRGFDLIVANPPYVP 127


>gi|291326172|ref|ZP_06123484.2| putative methyltransferase [Providencia rettgeri DSM 1131]
 gi|291315282|gb|EFE55735.1| putative methyltransferase [Providencia rettgeri DSM 1131]
          Length = 373

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDLG+G+G +     ++     GVG+D+S    E AK  A   GVS R   + +D  
Sbjct: 163 ARILDLGSGSGEMLCTWARDHAI-TGVGIDMSQLFSEQAKRRAEELGVSSRVQFIHNDAA 221

Query: 159 SSV-EGLFDVIVS-NPPYIESVIVDCLGLEVRDFDP 192
             V E  FDV+      +I       +GL  +   P
Sbjct: 222 GYVAEEKFDVVACIGATWIAGGFAGTVGLLAQSLKP 257


>gi|52079176|ref|YP_077967.1| Type I restriction modification system protein HsdMI [Bacillus
           licheniformis ATCC 14580]
 gi|52784543|ref|YP_090372.1| hypothetical protein BLi00744 [Bacillus licheniformis ATCC 14580]
 gi|52002387|gb|AAU22329.1| Type I restriction modification system protein HsdMI [Bacillus
           licheniformis ATCC 14580]
 gi|52347045|gb|AAU39679.1| putative protein [Bacillus licheniformis ATCC 14580]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     +   V   G +++     +AK N + +GV++  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINYPDSVKYHGQELNTTTFNLAKMNLILHGVNKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDAVLMNPPY 303


>gi|118579841|ref|YP_901091.1| methyltransferase small [Pelobacter propionicus DSM 2379]
 gi|118502551|gb|ABK99033.1| methyltransferase small [Pelobacter propionicus DSM 2379]
          Length = 268

 Score = 38.9 bits (89), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+ DLGTG G + L L +       VG + +     +A  NA  NG+ +R   ++ D
Sbjct: 66  DDARLADLGTGCGVIPLLLCRRFGSATAVGFESNGSMARLAAENARRNGLEQRAAFVERD 125

Query: 157 WFSSVEGL----FDVIVSNPPY 174
                       FD + +NPP+
Sbjct: 126 ILELRRHYPVSSFDGVTANPPF 147


>gi|270293232|ref|ZP_06199443.1| type I restriction-modification system, M subunit [Streptococcus
           sp. M143]
 gi|270279211|gb|EFA25057.1| type I restriction-modification system, M subunit [Streptococcus
           sp. M143]
          Length = 533

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E +    I D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|195977713|ref|YP_002122957.1| putative methylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974418|gb|ACG61944.1| putative methylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 179

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LDL  G+G + +  +      + V V+   KA  I ++N      S++F  L+ D   
Sbjct: 44  RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAER 102

Query: 158 -FSSVEGLFDVIVSNPPYIESVIV 180
            F  + G FDV+  +PPY +  IV
Sbjct: 103 AFDHLSGQFDVVFLDPPYAKETIV 126


>gi|294619904|ref|ZP_06699280.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1679]
 gi|291593841|gb|EFF25339.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1679]
          Length = 531

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|118777359|ref|XP_307877.2| AGAP009458-PA [Anopheles gambiae str. PEST]
 gi|116132913|gb|EAA03648.2| AGAP009458-PA [Anopheles gambiae str. PEST]
          Length = 230

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERF 150
           I+ R     +++G G+G V +AL K  P  +   +G D++  A  + +  A  NG   R 
Sbjct: 37  IKARQPSLCVEIGPGSGVVIVALSKHLPAGQTHCIGFDLNPNACRMTQKTAHLNG--SRV 94

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           D +  D  + +     D++V NPPY+ +
Sbjct: 95  DVVNMDLLAGLRPTSVDLLVFNPPYVPT 122


>gi|15643454|ref|NP_228500.1| hypothetical protein TM0691 [Thermotoga maritima MSB8]
 gi|170288042|ref|YP_001738280.1| methyltransferase type 11 [Thermotoga sp. RQ2]
 gi|281411919|ref|YP_003345998.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
 gi|4981214|gb|AAD35773.1|AE001741_6 conserved hypothetical protein [Thermotoga maritima MSB8]
 gi|170175545|gb|ACB08597.1| Methyltransferase type 11 [Thermotoga sp. RQ2]
 gi|281373022|gb|ADA66584.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
          Length = 216

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 11/85 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++V  +L+LG+G G V  AL K     K VGV+   +  E A      N + ER   +  
Sbjct: 37  KNVRSVLELGSGVGTVSFALAKLY-NVKVVGVEKEKELYEKALEGISLNKLEERVSFVN- 94

Query: 156 DWFSSVEGL------FDVIVSNPPY 174
              SSVE L      FD++VSNPP+
Sbjct: 95  ---SSVEELSFPPESFDMVVSNPPH 116


>gi|186684950|ref|YP_001868146.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186467402|gb|ACC83203.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 393

 Score = 38.9 bits (89), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF 150
           + +K+D+ RILD G GTG     L+  +P    VG+D+S  AL++AK     +G +   F
Sbjct: 50  KPQKQDI-RILDAGCGTGVSTEYLVHLNPQASVVGIDLSTGALDVAKERCQRSGANRVEF 108

Query: 151 DTLQSDWFSSVEGLFDVI 168
             L       + G FD+I
Sbjct: 109 HHLSLFDVEQLPGEFDLI 126


>gi|299136874|ref|ZP_07030057.1| Methyltransferase type 12 [Acidobacterium sp. MP5ACTX8]
 gi|298601389|gb|EFI57544.1| Methyltransferase type 12 [Acidobacterium sp. MP5ACTX8]
          Length = 481

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +   LL +  F   +G+D+S ++LEIAK     + + ER
Sbjct: 290 RVLDLGCGEGKLLRYLLADQQFEAILGMDVSWRSLEIAKDRLKLDQLPER 339


>gi|294616002|ref|ZP_06695828.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1636]
 gi|291591136|gb|EFF22819.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1636]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|281412831|ref|YP_003346910.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
 gi|281373934|gb|ADA67496.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +FY+ R+  + D+    P+ +L   L+ S L   L     ++  R+LDLG GTG   L L
Sbjct: 7   EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168
            +    F+ V VD S + LE+A+   V N V  R + L   S  F +V  L DV+
Sbjct: 61  QERG--FEVVLVDPSKEMLEVAREKGVKNVVEARAEDLPFPSGAFEAVLALGDVL 113


>gi|156975686|ref|YP_001446593.1| 16S rRNA m2G 1207 methyltransferase [Vibrio harveyi ATCC BAA-1116]
 gi|226713152|sp|A7MUT5|RSMC_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|156527280|gb|ABU72366.1| hypothetical protein VIBHAR_03421 [Vibrio harveyi ATCC BAA-1116]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  +    +LD G G G +   + K +P       DI+  A+  +++    NG+S 
Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD +S     +  IVSNPP+
Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275


>gi|325269122|ref|ZP_08135742.1| methyltransferase [Prevotella multiformis DSM 16608]
 gi|324988509|gb|EGC20472.1| methyltransferase [Prevotella multiformis DSM 16608]
          Length = 243

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD----TLQ 154
             ILD+GTGTG + L + +  P      +++   AL  A+ N + +   +R      TLQ
Sbjct: 45  AHILDIGTGTGLIALMMAQRFPSAHIDAIEMDEGALADARLNIMRSPFKDRISVIGVTLQ 104

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
             + +  +  +D IV NPPY
Sbjct: 105 R-YRAQADRPYDAIVCNPPY 123


>gi|311896054|dbj|BAJ28462.1| hypothetical protein KSE_26500 [Kitasatospora setae KM-6054]
          Length = 535

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             R+LDLG G G +  ALLKE    + +GVD+S +AL IA      + + ER
Sbjct: 335 AARVLDLGCGQGELVGALLKEPRVTEVLGVDVSSRALTIAARRLRLDRLPER 386


>gi|291531688|emb|CBK97273.1| Predicted N6-adenine-specific DNA methylase [Eubacterium siraeum
           70/3]
          Length = 376

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           A +++   FK  G DI  +A+ + + NAV  GV E  +  Q D   F+  EG   V++ N
Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDIADFTYPEGC-TVVLCN 302

Query: 172 PPYIESVI 179
           PPY E ++
Sbjct: 303 PPYGERML 310


>gi|229493682|ref|ZP_04387467.1| methyltransferase type 12 [Rhodococcus erythropolis SK121]
 gi|229319643|gb|EEN85479.1| methyltransferase type 12 [Rhodococcus erythropolis SK121]
          Length = 467

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 11/89 (12%)

Query: 74  PRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           PRP+  L    VD+ LA +L R+  R +V   D+G G G +   L+  + F K VGVD+S
Sbjct: 260 PRPDPPLARLRVDAVLA-TLQRLHVRTIV---DIGCGEGKLIEVLMPHAQFDKLVGVDVS 315

Query: 131 CKALEIA----KSNAVTNGVSERFDTLQS 155
            + L  A    K   +++   ER   +QS
Sbjct: 316 ARELTRAQRRLKFTEMSDAQRERVSLMQS 344


>gi|323340835|ref|ZP_08081087.1| methyltransferase [Lactobacillus ruminis ATCC 25644]
 gi|323091958|gb|EFZ34578.1| methyltransferase [Lactobacillus ruminis ATCC 25644]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  SS+ F    +  LL D    F+ P  +K    +I+DL  G GAV L L  +S   
Sbjct: 19  IKIIQSSEVFSFSLDAVLLAD----FANPAKKKEQ--KIVDLCAGNGAVGLFLTPKSS-A 71

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
           +   V+I  +  ++AK +   NG+ ER   +  D  +  + L     D +  NPPY E
Sbjct: 72  QIYEVEIQPRLADMAKRSIDLNGLEERVTVINDDLNNVFDYLAKDSIDTVTCNPPYFE 129


>gi|194017752|ref|ZP_03056362.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC
           7061]
 gi|194010652|gb|EDW20224.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC
           7061]
          Length = 311

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%)

Query: 101 ILDLGTGTG----AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D+GTG+G    A  +   K+   F     D+   A+E AK N   NGVSE+    Q++
Sbjct: 179 VIDVGTGSGILSVAAAMVGAKDIQAF-----DLDTVAVESAKQNIELNGVSEQVTVKQNN 233

Query: 157 WFSSVEGLFDVIVSN 171
               + G  DVIV+N
Sbjct: 234 LLDGISGERDVIVAN 248


>gi|297618925|ref|YP_003707030.1| methyltransferase small [Methanococcus voltae A3]
 gi|297377902|gb|ADI36057.1| methyltransferase small [Methanococcus voltae A3]
          Length = 214

 Score = 38.9 bits (89), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 5/76 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFS 159
           ILD+G G GA+ ++L  +      +  DI+ +++ +AK N   N V  +     Q + + 
Sbjct: 59  ILDMGCGYGAIGISLADDVNSV--IMTDINKRSVSLAKQNIKLNHVKNKNIKIFQGNLYE 116

Query: 160 SV--EGLFDVIVSNPP 173
            V  +  FD I+SNPP
Sbjct: 117 EVPKDAKFDTIISNPP 132


>gi|329121039|ref|ZP_08249670.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM
           19965]
 gi|327471201|gb|EGF16655.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM
           19965]
          Length = 246

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I+ +D  +I DLGTGTG + L LL           +I+    +IAK N 
Sbjct: 33  IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPIMADIAKRNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
             N  ++    L+ D+    E    G F  +V+NPPY
Sbjct: 90  SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPY 126


>gi|312952954|ref|ZP_07771810.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0102]
 gi|310629095|gb|EFQ12378.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0102]
          Length = 531

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|262831373|sp|C6CNL2|TRMN6_DICZE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 253

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +  R+  RILD+G G+G + L L + S   F   GV++   A   A  NA  +  ++   
Sbjct: 42  VPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCIR 101

Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              +D   +  +    + +IVSNPPY  S  VDC
Sbjct: 102 IYPADIVGYAQTATRRYSLIVSNPPYF-SPGVDC 134


>gi|300711088|ref|YP_003736902.1| methylase [Halalkalicoccus jeotgali B3]
 gi|299124771|gb|ADJ15110.1| methylase [Halalkalicoccus jeotgali B3]
          Length = 191

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 14/123 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG+G V + + K     + +  D++  A E A+   +     +  D  +S     
Sbjct: 39  VLDCGTGSGHVGVRMRKAGA--RVIASDLNPHACERAREAGLEAVRGDLLDPFRS----- 91

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G+FD +  NPPY+ +        E  D+   ++L GG  G +      DGV R L  D
Sbjct: 92  --GVFDAVAFNPPYLPTEPE----TEWDDW-MEVALSGGQSGRAVIEPFLDGVGRVLAPD 144

Query: 221 GLC 223
           G+ 
Sbjct: 145 GIA 147


>gi|218895170|ref|YP_002443581.1| hypothetical protein BCG9842_B5277 [Bacillus cereus G9842]
 gi|218542779|gb|ACK95173.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 246

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG   V L LL      K  GV+I  +  ++   +   NG+ ER   +  D    
Sbjct: 48  LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106

Query: 161 VEGL----FDVIVSNPPYIES 177
            E L    +DV+  NPPY ++
Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127


>gi|153835389|ref|ZP_01988056.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
           HY01]
 gi|148868091|gb|EDL67260.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
           HY01]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  +    +LD G G G +   + K +P       DI+  A+  +++    NG+S 
Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD +S     +  IVSNPP+
Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275


>gi|148270523|ref|YP_001244983.1| methyltransferase type 11 [Thermotoga petrophila RKU-1]
 gi|147736067|gb|ABQ47407.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +FY+ R+  + D+    P+ +L   L+ S L   L     ++  R+LDLG GTG   L L
Sbjct: 7   EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168
            +    F+ V VD S + LE+A+   V N V  R + L   S  F +V  L DV+
Sbjct: 61  QERG--FEVVLVDPSKEMLEVAREKGVKNVVEARAEDLPFPSGAFEAVLALGDVL 113


>gi|58336710|ref|YP_193295.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM]
 gi|58254027|gb|AAV42264.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM]
          Length = 206

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +L+ +    S P+        ILD+GTG G + L   K  P  +   +D++ + L +A+ 
Sbjct: 52  VLIKAMKDISFPK------ANILDVGTGYGPIGLFAAKFWPDQEVDMIDVNERGLNLARE 105

Query: 140 NAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
           NA  N + E  +   S+ +  ++    F +I++NPP
Sbjct: 106 NAKVNNI-ENVNIYASNCYEQIDNDKKFGLILTNPP 140


>gi|46578868|ref|YP_009676.1| hypothetical protein DVU0452 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448280|gb|AAS94935.1| hypothetical protein DVU_0452 [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 559

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DLGTG G V LALL  S    GVG++     +  A++NA   G+S RF    +D
Sbjct: 287 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARANAHRLGLSTRFTVHHAD 340


>gi|16262543|ref|NP_435336.1| putative methyltransferase [Sinorhizobium meliloti 1021]
 gi|307300711|ref|ZP_07580486.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
 gi|14523153|gb|AAK64748.1| putative methyltransferase [Sinorhizobium meliloti 1021]
 gi|306904245|gb|EFN34830.1| Methyltransferase type 11 [Sinorhizobium meliloti BL225C]
          Length = 261

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           R+LD+G G G       + +P  + +GVDIS + LE A+  +   G+ +  F+   + + 
Sbjct: 31  RVLDIGCGAGQTTREAARAAPQGEAIGVDISAEMLEEARRRSAAEGLRNAMFEQGDAQFH 90

Query: 159 SSVEGLFDVIVS 170
               G FD+ +S
Sbjct: 91  GFPTGSFDLCIS 102


>gi|332364614|gb|EGJ42383.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus sanguinis SK1059]
          Length = 533

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E +    I D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKYSHKPQTVVYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|300718657|ref|YP_003743460.1| ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661]
 gi|299064493|emb|CAX61613.1| Ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661]
          Length = 293

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 36/151 (23%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P PE   +++D  LAF           L  ++  D+    ++D G G+G + +A LK   
Sbjct: 122 PDPEAVNVMLDPGLAFGTGTHPTTSMCLTWLDGLDLQGKTVIDFGCGSGILAIAALKLG- 180

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNPPYIE 176
               +G+DI  +A++ ++ NA  NGVS+R        Q D  S+     DV+V+N     
Sbjct: 181 AASAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPHEQPDNLSA-----DVVVAN----- 230

Query: 177 SVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204
                 L   +R+  P IS   + GG  GLS
Sbjct: 231 -----ILAGPLRELAPLISVLPVKGGSLGLS 256


>gi|229550755|ref|ZP_04439480.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus rhamnosus LMS2-1]
 gi|229315866|gb|EEN81839.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus rhamnosus LMS2-1]
          Length = 540

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 98  VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148
           V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS       
Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLR 291

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             DTL  DW      LFD +V NPPY
Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|119383374|ref|YP_914430.1| ribosomal L11 methyltransferase [Paracoccus denitrificans PD1222]
 gi|119373141|gb|ABL68734.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Paracoccus
           denitrificans PD1222]
          Length = 289

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 16/97 (16%)

Query: 74  PRPETELLVDSALAF-------------SLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF             +L R+  E  +  RI+D+G GT  + +A  + 
Sbjct: 110 PAGAEALLIEAAMAFGTGHHATTKGCLLALDRLIAEGVEPRRIVDIGCGTAVLAMAAARS 169

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            P     G DI  +A+++A++N + NG+  R + +++
Sbjct: 170 FPVIVLAG-DIDPQAVDVARANVIANGLDGRVECVEA 205


>gi|320533776|ref|ZP_08034375.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134009|gb|EFW26358.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 267

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 26/98 (26%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------------- 147
           +DLG G G   L LL+ + +   V  DIS +AL     NA   GVS              
Sbjct: 1   MDLGCGCGIQTLYLLRHAEYV--VATDISARALAFTAFNAALAGVSVAGALGAGTESVAG 58

Query: 148 ---------ERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
                     R + L+      V G  FD+IVSNPP++
Sbjct: 59  SESGSDSGAGRLELLRGSLLEPVAGRRFDLIVSNPPFV 96


>gi|291556758|emb|CBL33875.1| Predicted N6-adenine-specific DNA methylase [Eubacterium siraeum
           V10Sc8a]
          Length = 376

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           A +++   FK  G DI  +A+ + + NAV  GV E  +  Q D   F+  EG   V++ N
Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDVADFTYPEGC-TVVLCN 302

Query: 172 PPYIESVI 179
           PPY E ++
Sbjct: 303 PPYGERML 310


>gi|256853743|ref|ZP_05559108.1| type I restriction-modification system M subunit [Enterococcus
           faecalis T8]
 gi|256710686|gb|EEU25729.1| type I restriction-modification system M subunit [Enterococcus
           faecalis T8]
 gi|315030240|gb|EFT42172.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX4000]
 gi|315144777|gb|EFT88793.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX2141]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|300867820|ref|ZP_07112462.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506]
 gi|300334151|emb|CBN57634.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506]
          Length = 393

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   +   +  +RILD G G+G     L+  +P    VG+D+S   LE+AK     
Sbjct: 41  AAYSFCTGQKPDKQDIRILDAGCGSGVSTEYLVHLNPEASVVGIDLSSGTLEVAKERCRR 100

Query: 144 NGVSER--FDTLQSDWFSSVEGLFDVI 168
           +G +ER  F  L       +EG FD+I
Sbjct: 101 SG-AERVAFHHLSLYDAGQLEGEFDLI 126


>gi|315497958|ref|YP_004086762.1| ribosomal l11 methyltransferase [Asticcacaulis excentricus CB 48]
 gi|315415970|gb|ADU12611.1| ribosomal L11 methyltransferase [Asticcacaulis excentricus CB 48]
          Length = 289

 Score = 38.9 bits (89), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++K    R+LD+G GTG + +A  K    +  VG DI   ++ I+  NA  N  + RF
Sbjct: 145 LKKHRYERVLDVGAGTGVLAIAAAKTGTKY-AVGTDIDAISVRISNENAKLNAAAARF 201


>gi|293556630|ref|ZP_06675196.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1039]
 gi|291601216|gb|EFF31502.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1039]
          Length = 531

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|257090571|ref|ZP_05584932.1| type I restriction-modification system M subunit [Enterococcus
           faecalis CH188]
 gi|312905100|ref|ZP_07764221.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0635]
 gi|256999383|gb|EEU85903.1| type I restriction-modification system M subunit [Enterococcus
           faecalis CH188]
 gi|310631490|gb|EFQ14773.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0635]
 gi|315579072|gb|EFU91263.1| type I restriction-modification system, M subunit [Enterococcus
           faecalis TX0630]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|237785867|ref|YP_002906572.1| methylase of peptide chain release factor [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758779|gb|ACR18029.1| methylase of peptide chain release factor [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 388

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 17/103 (16%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           VDPD+        F  + I R  + E +  I+G   F  + L +    F PRPETEL+V+
Sbjct: 63  VDPDTA------EFFESCISRREQREPLQHIMGTVRFAGIDLLVGPGAFVPRPETELIVE 116

Query: 84  SA---LAFSLPRIEKRDV--------VRILDLGTGTGAVCLAL 115
            A   L  +L     +D           I+DL TG G + L +
Sbjct: 117 WAGKQLRRALDNRSDKDGSSKPVPTDYTIVDLCTGPGTLALGV 159


>gi|295837555|ref|ZP_06824488.1| methyltransferase [Streptomyces sp. SPB74]
 gi|197698363|gb|EDY45296.1| methyltransferase [Streptomyces sp. SPB74]
          Length = 338

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 29/57 (50%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            I+DLG+GTGA   ALL   P      VD S   L+  +  A   G+  R  T+Q+D
Sbjct: 111 HIVDLGSGTGAGTFALLDRFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVQAD 167


>gi|154496263|ref|ZP_02034959.1| hypothetical protein BACCAP_00548 [Bacteroides capillosus ATCC
           29799]
 gi|150274346|gb|EDN01423.1| hypothetical protein BACCAP_00548 [Bacteroides capillosus ATCC
           29799]
          Length = 399

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           G DI  KA+EIA+SNA   GV +  RF+   +  F   E  +  +V+NPPY E ++
Sbjct: 282 GGDIDPKAVEIARSNAEKAGVDDVVRFEVADATRFHRSEP-YGRVVTNPPYGERIM 336


>gi|119482041|ref|XP_001261049.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
 gi|119409203|gb|EAW19152.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
          Length = 331

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LLV   L +  P +      RILD+GTGTG   L +  + P  + VG D+S      A 
Sbjct: 76  KLLVGGDL-YRAPILNDGPPKRILDVGTGTGIWPLEMADDFPDAEIVGTDLSPIQPNWAP 134

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            N   N      D  +SDW  +    FD I
Sbjct: 135 PNCTFN-----VDDAESDWTFTPAEAFDYI 159


>gi|69245865|ref|ZP_00603682.1| Type I restriction-modification system M subunit [Enterococcus
           faecium DO]
 gi|257879183|ref|ZP_05658836.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,230,933]
 gi|257881998|ref|ZP_05661651.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,502]
 gi|257890013|ref|ZP_05669666.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,410]
 gi|260560170|ref|ZP_05832347.1| type I restriction-modification system M subunit [Enterococcus
           faecium C68]
 gi|293560248|ref|ZP_06676747.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1162]
 gi|294620836|ref|ZP_06700040.1| type I restriction-modification system, M subunit [Enterococcus
           faecium U0317]
 gi|314947719|ref|ZP_07851126.1| type I restriction-modification system, M subunit [Enterococcus
           faecium TX0082]
 gi|68195567|gb|EAN10009.1| Type I restriction-modification system M subunit [Enterococcus
           faecium DO]
 gi|257813411|gb|EEV42169.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,230,933]
 gi|257817656|gb|EEV44984.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,502]
 gi|257826373|gb|EEV52999.1| type I restriction-modification system M subunit [Enterococcus
           faecium 1,231,410]
 gi|260073737|gb|EEW62062.1| type I restriction-modification system M subunit [Enterococcus
           faecium C68]
 gi|291599621|gb|EFF30634.1| type I restriction-modification system, M subunit [Enterococcus
           faecium U0317]
 gi|291605792|gb|EFF35227.1| type I restriction-modification system, M subunit [Enterococcus
           faecium E1162]
 gi|313645699|gb|EFS10279.1| type I restriction-modification system, M subunit [Enterococcus
           faecium TX0082]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|328474212|gb|EGF45017.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 10329]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P       DI+  A+  +++    NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTANDYRFIISNPPF 275


>gi|167751246|ref|ZP_02423373.1| hypothetical protein EUBSIR_02232 [Eubacterium siraeum DSM 15702]
 gi|167655753|gb|EDR99882.1| hypothetical protein EUBSIR_02232 [Eubacterium siraeum DSM 15702]
          Length = 376

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           A +++   FK  G DI  +A+ + + NAV  GV E  +  Q D   F+  EG   V++ N
Sbjct: 244 ANIRKPENFKLYGFDIDPEAVRLTRDNAVKAGVGEYIEVKQRDVADFTYPEGC-TVVLCN 302

Query: 172 PPYIESVI 179
           PPY E ++
Sbjct: 303 PPYGERML 310


>gi|153838411|ref|ZP_01991078.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
 gi|149748218|gb|EDM59077.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P       DI+  A+  +++    NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTANDYRFIISNPPF 275


>gi|90415971|ref|ZP_01223904.1| possible methyltransferase [marine gamma proteobacterium HTCC2207]
 gi|90332345|gb|EAS47542.1| possible methyltransferase [marine gamma proteobacterium HTCC2207]
          Length = 260

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 5/89 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +LP +E +  +RILD+G G G + +AL K     + V  D+S + LE+A+  A+  G
Sbjct: 38  LLAALPDLEIQAPLRILDIGGGLGQLTVALAKLG--HQVVYNDLSQQMLEVAQKLALEEG 95

Query: 146 VSERFDTLQSDWFS-SVEGL--FDVIVSN 171
           V ++    Q  + +   +GL  FD+++S+
Sbjct: 96  VMDKIIWCQQPYQTLKDQGLERFDLVMSH 124


>gi|84617327|emb|CAI94687.1| hypothetical protein [Streptomyces achromogenes subsp. rubradiris]
          Length = 331

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R+LD+G GTG V  AL+  +     VG+D +  A+EIA+  A   G+  RF
Sbjct: 174 RVLDVGCGTGEV--ALMAAALGLPTVGIDPASTAIEIARRKAEERGLQARF 222


>gi|56421054|ref|YP_148372.1| hypothetical protein GK2519 [Geobacillus kaustophilus HTA426]
 gi|56380896|dbj|BAD76804.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 247

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +  +  KR   R++D+G GTG + + L K    ++  GVD+S   L +A++ A   GV  
Sbjct: 29  AFAQYTKRPGRRVIDIGCGTGELAIRLAKAG--WQVSGVDLSEHMLAVAQAKAEAEGVEV 86

Query: 149 RF---DTLQSDWFSSVEGLF 165
            F   +  + D FS ++G F
Sbjct: 87  PFFEQNMAELDGFSDLDGAF 106


>gi|313679089|ref|YP_004056828.1| rRNA (guanine-n(2)-)-methyltransferase [Oceanithermus profundus DSM
           14977]
 gi|313151804|gb|ADR35655.1| rRNA (guanine-N(2)-)-methyltransferase [Oceanithermus profundus DSM
           14977]
          Length = 381

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+L+L    G   +  L     F    VD+S  AL  A+ NA  NG++ER + +++D F
Sbjct: 207 ARVLNLFAYNGGFSVYALAGGAAF-ARSVDVSEGALADARENARLNGLAERHEAVRADVF 265

Query: 159 ---SSVEGLFDVIVSNPPYI 175
              ++ E  +D++V +PP +
Sbjct: 266 EFLNAHEETYDLVVLDPPAL 285


>gi|307298996|ref|ZP_07578798.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915421|gb|EFN45806.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 225

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQ-SD 156
           R L+LG G+G + + L K     +  GV++  +   +A  NA  NGV    RF      D
Sbjct: 46  RALELGAGSGVISIYLAKNFGL-EVTGVEVDRELHAVATKNASLNGVENLTRFVNCDIDD 104

Query: 157 WFSSVEG-LFDVIVSNPPYI 175
           + ++  G +FD++VSNPP+ 
Sbjct: 105 YAANNRGEVFDMVVSNPPHF 124


>gi|257900171|ref|ZP_05679824.1| type I restriction-modification system M subunit [Enterococcus
           faecium Com15]
 gi|293379346|ref|ZP_06625491.1| type I restriction-modification system, M subunit [Enterococcus
           faecium PC4.1]
 gi|257838083|gb|EEV63157.1| type I restriction-modification system M subunit [Enterococcus
           faecium Com15]
 gi|292642038|gb|EFF60203.1| type I restriction-modification system, M subunit [Enterococcus
           faecium PC4.1]
          Length = 531

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           ++R    + D   G+G++ L +   L      K  G +++     +AK N + +GV +E 
Sbjct: 215 KERRFFSVFDPTMGSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEE 274

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MNLRNGDTLNKDWPTDEPYTFDAVVMNPPY 304


>gi|251788690|ref|YP_003003411.1| methyltransferase small [Dickeya zeae Ech1591]
 gi|247537311|gb|ACT05932.1| methyltransferase small [Dickeya zeae Ech1591]
          Length = 265

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +  R+  RILD+G G+G + L L + S   F   GV++   A   A  NA  +  ++   
Sbjct: 54  VPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCIR 113

Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDC 182
              +D   +  +    + +IVSNPPY  S  VDC
Sbjct: 114 IYPADIVGYAQTATRRYSLIVSNPPYF-SPGVDC 146


>gi|238852660|ref|ZP_04643070.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           202-4]
 gi|238834806|gb|EEQ27033.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           202-4]
          Length = 315

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 29/166 (17%)

Query: 56  GWRDFYNV-------RLTLSSDTFEPR-PETELL-VDSALAFS----------LPRIEKR 96
            W+ +Y+V        +    + + P  P+ +L+ +D  LAF           L  +E+ 
Sbjct: 115 AWQKYYHVIDFSRHLAIVPEWEDYHPAFPDQKLIRLDPGLAFGTGGHTTTQLVLLAMERA 174

Query: 97  DV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            V  + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N V+   +  +
Sbjct: 175 LVKPMSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRK 232

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           ++    ++  +D+IV+N      ++ D L   + D D  ++ +G +
Sbjct: 233 ANLLKDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 272


>gi|228905831|ref|ZP_04069729.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200]
 gi|228853771|gb|EEM98530.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200]
          Length = 246

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG   V L LL      K  GV+I  +  ++   +   NG+ ER   +  D    
Sbjct: 48  LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106

Query: 161 VEGL----FDVIVSNPPYIES 177
            E L    +DV+  NPPY ++
Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127


>gi|218296340|ref|ZP_03497083.1| ribosomal L11 methyltransferase [Thermus aquaticus Y51MC23]
 gi|218243134|gb|EED09665.1| ribosomal L11 methyltransferase [Thermus aquaticus Y51MC23]
          Length = 252

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R+LD+GTG+G   LA+  E    K +GVD+    L  A++NA  NGV  +F
Sbjct: 123 RVLDVGTGSG--ILAIAAEKLGGKALGVDVDPSVLPQAEANARRNGVYPQF 171


>gi|146309213|ref|YP_001189678.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp]
 gi|145577414|gb|ABP86946.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp]
          Length = 399

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NG +E+   ++ D 
Sbjct: 224 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNATLNGFAEKITCVEGDV 280

Query: 158 FS------SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F+      S E  FDV++++PP +I+           R  D +       +G + YR + 
Sbjct: 281 FAALRELKSAEERFDVVIADPPAFIK-----------RKKDIK-------NGEAAYRRLN 322

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R LNKDG+     CS+ +
Sbjct: 323 EIAMRLLNKDGILVSASCSMHL 344


>gi|330812398|ref|YP_004356860.1| hypothetical protein PSEBR_a5353 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380506|gb|AEA71856.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 398

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NG +E+   ++ D 
Sbjct: 223 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASAFALDGVERNAALNGFAEKLTCIEGDV 279

Query: 158 FSSVEGL------FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F +++ L      FDVIV++PP +I+           R  D +       +G   YR + 
Sbjct: 280 FEALKELKASEERFDVIVADPPAFIK-----------RKKDLK-------NGEGAYRRLN 321

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R L+KDG+     CS+ +
Sbjct: 322 EQAMRLLSKDGILVSASCSMHL 343


>gi|309791823|ref|ZP_07686310.1| methyltransferase small [Oscillochloris trichoides DG6]
 gi|308226145|gb|EFO79886.1| methyltransferase small [Oscillochloris trichoides DG6]
          Length = 195

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 9/104 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +FE    T+LL+ S      P+       RILDLG G G + + + +  P    V  D  
Sbjct: 32  SFEIDDGTDLLLRSVEPAITPQ-------RILDLGCGCGVIAITMAQRFPEAAVVAADKD 84

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
             A+  A++NA  N V      L S    SV  G +D+I SN P
Sbjct: 85  LLAVRYARANAQLNAVPH-VQILGSVGLESVPAGPYDLIFSNIP 127


>gi|296241773|ref|YP_003649260.1| methyltransferase small [Thermosphaera aggregans DSM 11486]
 gi|296094357|gb|ADG90308.1| methyltransferase small [Thermosphaera aggregans DSM 11486]
          Length = 160

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 21/113 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG+GTG V   LL        V VD+   AL  +K     N +S R  T+     +SV
Sbjct: 3   VDLGSGTGIVGSHLLSNGYCELAVLVDVMEDALTSSKMTLEVNNLSSRGITI-----TSV 57

Query: 162 EGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           E L     D++VSNPPY+ +           + D  I+ +GG+ G   Y TIA
Sbjct: 58  EALGDGSVDMVVSNPPYLPA-------HAPSEID--IATEGGVKG---YETIA 98


>gi|262405018|ref|ZP_06081570.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586]
 gi|262348857|gb|EEY97998.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586]
          Length = 295

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 19/113 (16%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  ++  D+    ++D G G+G + +A +K   
Sbjct: 123 PDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +AL  +K NA  NGV ++ +  L  D     EGL  DV+V+N
Sbjct: 182 AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD---QPEGLLADVVVAN 231


>gi|149202837|ref|ZP_01879809.1| hypothetical protein RTM1035_09469 [Roseovarius sp. TM1035]
 gi|149144119|gb|EDM32153.1| hypothetical protein RTM1035_09469 [Roseovarius sp. TM1035]
          Length = 391

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  AL +A   A   G++ERF+T + D F  +E L      FDV++ +PP
Sbjct: 246 VDGSDPALGLATQGAARMGLAERFETRRGDAFDVMEALAAEGAQFDVVICDPP 298


>gi|153814681|ref|ZP_01967349.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756]
 gi|145848175|gb|EDK25093.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756]
          Length = 458

 Score = 38.9 bits (89), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DL +GTG +  AL   +P  K V GV+I  +A+E AK NA  NG+S   + +  D F 
Sbjct: 317 VFDLFSGTGTISQAL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372

Query: 160 SVEGLF---DVIVSNPP 173
            ++ +    DVI+ +PP
Sbjct: 373 VLDDIKEKPDVIILDPP 389


>gi|327384000|gb|AEA55475.1| type I restriction modification system protein [Lactobacillus casei
           LC2W]
 gi|327387192|gb|AEA58665.1| type I restriction modification system protein [Lactobacillus casei
           BD-II]
          Length = 538

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 98  VVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVS------E 148
           V  I D   G+G++ L +   +++       G +++     +A+ N + +GVS       
Sbjct: 232 VRTIYDPAVGSGSLLLNVGQHVQDPNLVSYHGQELNTTTYNLARMNLMLHGVSYDDMHLR 291

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             DTL  DW      LFD +V NPPY
Sbjct: 292 NGDTLSKDWPVDEPYLFDAVVMNPPY 317


>gi|304311684|ref|YP_003811282.1| Ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HdN1]
 gi|301797417|emb|CBL45637.1| Ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HdN1]
          Length = 329

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 9/124 (7%)

Query: 58  RDFYNVRLTLSSD--TFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           RD++ +RL    D   F  +P     E        LA   P++ ++   R+LDLG G G 
Sbjct: 138 RDYHRLRLIGEEDGLQFYSKPGQFGWEKIDAGSQLLASCFPQLFQQSPGRVLDLGCGYGY 197

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L + +  P  +    D +  AL   + N   + +    + +  D    + GLFD ++ 
Sbjct: 198 LSLQVSRYHPS-QITATDNNSAALLSCRFNFQFHHI-HYGNVIADDCARQITGLFDTVIC 255

Query: 171 NPPY 174
           NPP+
Sbjct: 256 NPPF 259


>gi|257466750|ref|ZP_05631061.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917899|ref|ZP_07914139.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691774|gb|EFS28609.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 393

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+ + +G   +A L++    + + +D    ALE+ + N   N     F T++ D F
Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAR-EVIAIDKDAHALELCRENYELNHFQSNFSTMEGDAF 276

Query: 159 SSVEGL------FDVIVSNPP 173
             +E L      FD+I  +PP
Sbjct: 277 LLLETLGGRKEKFDIITLDPP 297


>gi|255074075|ref|XP_002500712.1| predicted protein [Micromonas sp. RCC299]
 gi|226515975|gb|ACO61970.1| predicted protein [Micromonas sp. RCC299]
          Length = 455

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 22/124 (17%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLG----------TGTGAVCLALLKESPFFKG 124
           R E +L       F + + + R  VR L  G          TG  A+  AL   +     
Sbjct: 246 RYEVDLTKGHKTGFYVDQRDNRAEVRALGAGKKRVLDVCCYTGGFAINAALGGAADV--- 302

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---------GLFDVIVSNPPYI 175
            GVD S  AL+IA+ NA  NGV  R   +QS+ F  ++         G FD+IV +PP +
Sbjct: 303 TGVDSSPLALDIARRNADVNGVGARTTFVQSEAFKYLDDLVADSGNLGTFDMIVLDPPKL 362

Query: 176 ESVI 179
              +
Sbjct: 363 APSV 366


>gi|121710632|ref|XP_001272932.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Aspergillus clavatus NRRL 1]
 gi|119401082|gb|EAW11506.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Aspergillus clavatus NRRL 1]
          Length = 348

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   FKG  VGVD S +++E+A+
Sbjct: 106 ILDLGTGNGSM-LALLRKRGGFKGVMVGVDYSARSVELAR 144


>gi|254786393|ref|YP_003073822.1| type I restriction-modification system, M subunit [Teredinibacter
           turnerae T7901]
 gi|237686117|gb|ACR13381.1| type I restriction-modification system, M subunit [Teredinibacter
           turnerae T7901]
          Length = 535

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 68  SSDTFEPRPETELLVD-SALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKE-SPFFKG 124
           + + + P+P +++L +   L    P   +K+ + ++LD   G+G++ L + K+  P   G
Sbjct: 201 AGEFYTPQPISQILSEIVTLDSQEPATGKKKKIKQVLDFACGSGSLLLNVRKQLGPHGIG 260

Query: 125 --VGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDW------FSSVEGLFDVIVS 170
              G + +     +A+ N + +GV +        DTL++DW        + +  FD +V+
Sbjct: 261 KIYGQEKNITTYNLARMNMLLHGVKDTEFEIHHGDTLENDWDILNEMNPAKKMQFDAVVA 320

Query: 171 NPPY 174
           NPP+
Sbjct: 321 NPPF 324


>gi|108801815|ref|YP_642012.1| putative methylase [Mycobacterium sp. MCS]
 gi|119870968|ref|YP_940920.1| putative methylase [Mycobacterium sp. KMS]
 gi|108772234|gb|ABG10956.1| Putative methylase [Mycobacterium sp. MCS]
 gi|119697057|gb|ABL94130.1| putative methylase [Mycobacterium sp. KMS]
          Length = 231

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 19/110 (17%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTG--AVCLALLKESPFFKGVG 126
           + P+ +++LLVD         +EK  +    R +DL TG+G  AV  AL   S       
Sbjct: 19  YAPQEDSQLLVDI--------MEKTGLAVGRRAVDLCTGSGVVAVNAALQGASSV---TA 67

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175
            DI  +A+  A+ NA+  GV    D     W  +VE   FD++  NPPY+
Sbjct: 68  FDICPRAVRCARGNALGAGVD--VDVHLGSWARAVEFDPFDLVTCNPPYV 115


>gi|28899251|ref|NP_798856.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260362175|ref|ZP_05775165.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus K5030]
 gi|260879053|ref|ZP_05891408.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AN-5034]
 gi|260895928|ref|ZP_05904424.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus Peru-466]
 gi|260903439|ref|ZP_05911834.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AQ4037]
 gi|81726990|sp|Q87LY1|RSMC_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|28807475|dbj|BAC60740.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085366|gb|EFO35061.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus Peru-466]
 gi|308089537|gb|EFO39232.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AN-5034]
 gi|308106585|gb|EFO44125.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AQ4037]
 gi|308111050|gb|EFO48590.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus K5030]
          Length = 341

 Score = 38.9 bits (89), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P       DI+  A+  +++    NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGR--VFASDIYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  I+SNPP+
Sbjct: 261 DTANDYRFIISNPPF 275


>gi|254292788|ref|YP_003058811.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814]
 gi|254041319|gb|ACT58114.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814]
          Length = 313

 Score = 38.9 bits (89), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 5/82 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +KR + ++LD+GTG+  + +A +K       V  DI  +++ IAK NA  N +      L
Sbjct: 141 KKRKLGKVLDIGTGSAVLAIAAMKSGASM-AVASDIDPESIRIAKINAENNKMGRNLHLL 199

Query: 154 ----QSDWFSSVEGLFDVIVSN 171
                ++ F   +G +D +++N
Sbjct: 200 VATGANNAFIRNQGKYDTVMAN 221


>gi|258569605|ref|XP_002543606.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237903876|gb|EEP78277.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 362

 Score = 38.9 bits (89), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 44/123 (35%)

Query: 100 RILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF----- 150
           RILDL TGTG + L   +LL  S P    VG+DIS KAL +A+ N   N   E       
Sbjct: 104 RILDLCTGTGCIPLLLHSLLAPSIPNLTIVGIDISPKALNLARRNLDYNISREHLLPRAK 163

Query: 151 ---DTLQSDWF------------SSVEGL--------------------FDVIVSNPPYI 175
                LQ++              ++V GL                    +DV++SNPPYI
Sbjct: 164 QDVHFLQANVLHDEETQRLNGVATTVPGLPTVLLDFPPAEANSGAKNADWDVLISNPPYI 223

Query: 176 ESV 178
            + 
Sbjct: 224 STA 226


>gi|297619901|ref|YP_003708006.1| methylase [Methanococcus voltae A3]
 gi|297378878|gb|ADI37033.1| methylase [Methanococcus voltae A3]
          Length = 223

 Score = 38.9 bits (89), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 20/155 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L F+  +  K   V  LD+GTG+G   L+  K    +  +GVDI+  A++ +  N  
Sbjct: 26  DSELLFNNLKDVKNKTV--LDVGTGSGIQALSAFKNGADY-VLGVDINPYAIKTSYDNLK 82

Query: 143 TNGVSERFDTLQ--------SDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            N   E  + L+        SD F ++       FDVI+ N PY+ +   + L   +   
Sbjct: 83  LNFNIENSNNLETLKIRFLYSDLFENITKSKIKKFDVILFNAPYLPTSEDEKLEKYL--- 139

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               + DGG DG          + ++L K G+  +
Sbjct: 140 --NYAFDGGSDGRKVLDKFIKELPKYLKKGGVVKI 172


>gi|20807438|ref|NP_622609.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           tengcongensis MB4]
 gi|38605369|sp|Q8RB66|PRMA_THETN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|20515962|gb|AAM24213.1| Ribosomal protein L11 methylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 309

 Score = 38.9 bits (89), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)

Query: 96  RDVVR----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            D+V+    + D+G G+G + +A  K    +   G D+   A++IA+ N   NG+ E  +
Sbjct: 168 EDIVKPGAIVFDVGCGSGILSIAASKLGASYV-YGADVDEMAVKIARENVKLNGL-ENVE 225

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             QSD   +  G  DVIV+N      +I D +   + D  P +  +G
Sbjct: 226 IFQSDLLKNFRGKADVIVAN------IIADAIIRLIPDVLPHLKEEG 266


>gi|87301259|ref|ZP_01084100.1| possible methyltransferase [Synechococcus sp. WH 5701]
 gi|87284227|gb|EAQ76180.1| possible methyltransferase [Synechococcus sp. WH 5701]
          Length = 441

 Score = 38.9 bits (89), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V SA    LP  E    VR+LD G GTG     L   +P  + + VDIS  ALE+A+   
Sbjct: 78  VSSACTGRLP--EAGPPVRLLDAGCGTGVSTDYLAHLNPGAEILAVDISAGALEVARERL 135

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
             +G +    +L+ +  S +    EG FD+I S
Sbjct: 136 RRSGGARHCSSLRLEQRSLLELDGEGPFDLINS 168


>gi|315648620|ref|ZP_07901717.1| type I restriction-modification system, M subunit [Paenibacillus
           vortex V453]
 gi|315275999|gb|EFU39347.1| type I restriction-modification system, M subunit [Paenibacillus
           vortex V453]
          Length = 530

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +   L      K  G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNVRNYLNHPDNVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303


>gi|257452885|ref|ZP_05618184.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059427|ref|ZP_07923912.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313685103|gb|EFS21938.1| methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 393

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+ + +G   +A L++    + + +D    ALE+ + N   N     F T++ D F
Sbjct: 218 TRFLDVFSSSGGFSMAALRDGAR-EVIAIDKDAHALELCRENYELNHFQSNFSTMEGDAF 276

Query: 159 SSVEGL------FDVIVSNPP 173
             +E L      FD+I  +PP
Sbjct: 277 LLLETLGGRKEKFDIITLDPP 297


>gi|271964972|ref|YP_003339168.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum
           DSM 43021]
 gi|270508147|gb|ACZ86425.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum
           DSM 43021]
          Length = 384

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 8/90 (8%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---G 145
           +LPR  +R   R++DLG G G V +A    +P  + + +D S +A+  A++    N   G
Sbjct: 233 NLPR--RRGPERVVDLGCGNGVVGVAAALANPEAEVMFIDESYQAVASAEATFRANAGAG 290

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPY 174
            + RF  +  D  S V  G  D++++NPP+
Sbjct: 291 TTARF--VVGDGLSGVPAGTVDLVLNNPPF 318


>gi|71734107|ref|YP_273308.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|123637922|sp|Q48MR4|RSMC_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|71554660|gb|AAZ33871.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 332

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G GTG +  A+ +  P    + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGTGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|89097040|ref|ZP_01169931.1| YefA [Bacillus sp. NRRL B-14911]
 gi|89088420|gb|EAR67530.1| YefA [Bacillus sp. NRRL B-14911]
          Length = 458

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 62  NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F +  PE T++L + AL ++    E+     ++D   G G + L L +++
Sbjct: 276 DIKFAISARSFYQVNPEQTKVLYEKALEYADLSGEES----VIDAYCGIGTISLFLAQKA 331

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG-LFDVIVSNP 172
              K  GV+I  +A+E AK NA  NG++         + +  DW+   EG   DV+V +P
Sbjct: 332 K--KVFGVEIVPEAIEDAKRNAALNGITNAEFAVGEAEKVIPDWYK--EGNQADVLVVDP 387

Query: 173 P 173
           P
Sbjct: 388 P 388


>gi|327400310|ref|YP_004341149.1| methylase [Archaeoglobus veneficus SNP6]
 gi|327315818|gb|AEA46434.1| methylase [Archaeoglobus veneficus SNP6]
          Length = 180

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 21/155 (13%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+ + P  ++ELL+++A+       E R    +L++G G+G V   +     F   + 
Sbjct: 1   MTSEVYPPSEDSELLLEAAMR------EIRLEDEVLEVGVGSGFVSERIKDLCRFL--IA 52

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  A+  +KS  +        + +++D    +   F +I+ NPPY+E    +  G  
Sbjct: 53  TDISPYAVRESKSKGI--------EVVRTDLCRGIRRKFTLILFNPPYLELSEKEKRG-- 102

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             D+  + ++DGG  G+       D V   L ++G
Sbjct: 103 --DWLEK-AVDGGKGGIEVATRFLDEVKEVLAENG 134


>gi|228898788|ref|ZP_04063071.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL
           4222]
 gi|228860813|gb|EEN05190.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL
           4222]
          Length = 246

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG   V L LL      K  GV+I  +  ++   +   NG+ ER   +  D    
Sbjct: 48  LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLKERIHLIHGDLKDM 106

Query: 161 VEGL----FDVIVSNPPYIES 177
            E L    +DV+  NPPY ++
Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127


>gi|90579648|ref|ZP_01235457.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14]
 gi|90439222|gb|EAS64404.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14]
          Length = 384

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 11/126 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRI-----LDLGTGTGAVCLALLKESPFFKGVGVDI 129
           RP++    +  +A SL    KR V  I      DL  G G   L   +E       G++I
Sbjct: 213 RPKSFFQTNPKVAESLYATAKRWVSEIKPTSMWDLFCGVGGFALHCAEEVEHV--TGIEI 270

Query: 130 SCKALEIAKSNAVTNGVSE-RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
             +A+E AK +A   GV+  RF  L S  FS S E   ++++ NPP     I + L  ++
Sbjct: 271 EPEAIESAKHSAEIMGVTNLRFAALDSTSFSQSNESAPELVLVNPP--RRGIGEQLCQQL 328

Query: 188 RDFDPR 193
            DF P+
Sbjct: 329 NDFAPK 334


>gi|86156674|ref|YP_463459.1| 50S ribosomal protein L11P methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773185|gb|ABC80022.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 287

 Score = 38.9 bits (89), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +LD+GTG+G + +A  K     +  G D    A+ +A+ NA  NGV E    
Sbjct: 144 LAARPGASVLDVGTGSGLLAIAARKLG-AGRVTGNDNDPVAVAVARENAARNGVPEV--A 200

Query: 153 LQSDWFSSVEGLFDVIVSN 171
           L      ++ G FDV+V+N
Sbjct: 201 LTEAALPAIGGAFDVVVAN 219


>gi|310790753|gb|EFQ26286.1| methyltransferase domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 350

 Score = 38.9 bits (89), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L  + P  E   V R+LD+GTGTG   L    E P  +  GVD+S         
Sbjct: 78  LLLDDRLGVAPPCKEGAQVGRVLDVGTGTGIWALNFGDEHPEAEVYGVDLSPTLPGYVPP 137

Query: 140 NAVTNGVSERFDTLQSDW 157
           N     V+   D ++ +W
Sbjct: 138 N-----VTFEIDDVEEEW 150


>gi|295839041|ref|ZP_06825974.1| methylase [Streptomyces sp. SPB74]
 gi|295827299|gb|EFG65338.1| methylase [Streptomyces sp. SPB74]
          Length = 218

 Score = 38.9 bits (89), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LDL TG+GA+ L              D+S +A+   + NA      +R   L+ D  
Sbjct: 33  TRVLDLCTGSGALALLAALRGAHVSAT--DLSWRAVLSTRLNAAR--ARQRVRVLRGDLS 88

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             V G  FD++VSNPPY+ +          RD    ++ D G  G
Sbjct: 89  GPVRGQRFDLVVSNPPYVPAPGAP----RRRDHSAALAWDAGPGG 129


>gi|188527247|ref|YP_001909934.1| type I restriction enzyme M protein [Helicobacter pylori Shi470]
 gi|188143487|gb|ACD47904.1| type I restriction enzyme M protein [Helicobacter pylori Shi470]
          Length = 543

 Score = 38.9 bits (89), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L++ K N + N 
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S  ++G  D IVSNPP+
Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315


>gi|163756357|ref|ZP_02163471.1| hypothetical protein KAOT1_01874 [Kordia algicida OT-1]
 gi|161323709|gb|EDP95044.1| hypothetical protein KAOT1_01874 [Kordia algicida OT-1]
          Length = 430

 Score = 38.9 bits (89), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
             +DIS  ALEIAKSNA  N  S + + +  D F  +  L      FD++V +PP
Sbjct: 284 TSLDISAPALEIAKSNAKLNEFSGKHNIIVGDAFEELNHLAKAKQKFDIVVIDPP 338


>gi|300811169|ref|ZP_07091681.1| methyltransferase small domain protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300497873|gb|EFK32883.1| methyltransferase small domain protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 200

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 14/143 (9%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90
           +++F  N  V   +H   + + G     N+ LT  +  F        + +L++  L   L
Sbjct: 3   EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKNRVDYGSGVLIEQMLDQEL 58

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P         ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  N  ++  
Sbjct: 59  PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GADNV 111

Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173
           +   SD +  V G + +IV+NPP
Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134


>gi|296314313|ref|ZP_06864254.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea
           ATCC 43768]
 gi|296838974|gb|EFH22912.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea
           ATCC 43768]
          Length = 295

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAIRASKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|262068284|ref|ZP_06027896.1| RNA methyltransferase, RsmD family [Fusobacterium periodonticum
           ATCC 33693]
 gi|291378022|gb|EFE85540.1| RNA methyltransferase, RsmD family [Fusobacterium periodonticum
           ATCC 33693]
          Length = 182

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P +E       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G ++R    ++D   +VE L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           +    L
Sbjct: 127 ITTKVL 132


>gi|257463526|ref|ZP_05627919.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
          Length = 309

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N V  E+++ L  +   
Sbjct: 175 VLDVGTGSGILMIVAEKLGARFV-CGVDIDELAVEVAHENLELNAVPKEKYEVLHGNLIE 233

Query: 160 SVEGL-FDVIVSN 171
            +E   +DV+V+N
Sbjct: 234 KIEAKSYDVVVAN 246


>gi|239905363|ref|YP_002952102.1| hypothetical protein DMR_07250 [Desulfovibrio magneticus RS-1]
 gi|239795227|dbj|BAH74216.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 248

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            RILDLG+G+G +     ++    +GVGVD+S    E A+S AV  GV++R   +  D
Sbjct: 38  TRILDLGSGSGEMLCTWARDHGI-RGVGVDMSSLFTEQARSRAVELGVADRVRFVHGD 94


>gi|154344058|ref|XP_001567973.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134065307|emb|CAM40735.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 253

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G+G G VCL +L E+   K VGV+I    +  A+        S+R   L SD FS  E
Sbjct: 110 DIGSGVGNVCLQVLSETKCLKSVGVEIIPSRIRAAEE------ASKRAKLLYSDIFSKKE 163

Query: 163 GLF 165
            ++
Sbjct: 164 AVW 166


>gi|77461575|ref|YP_351082.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1]
 gi|77385578|gb|ABA77091.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1]
          Length = 398

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 33/141 (23%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NG +++   ++ D 
Sbjct: 223 RVLDLYSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNAALNGFADKMTCIEGDV 279

Query: 158 FSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F +++ L      FDVIV++PP       D                   +G   YR + +
Sbjct: 280 FEALKELKASEERFDVIVADPPAFIKRKKDL-----------------KNGEGAYRRLNE 322

Query: 212 GVSRHLNKDGL-----CSVEI 227
              R LNKDG+     CS+ +
Sbjct: 323 QAMRLLNKDGILFSASCSMHL 343


>gi|83854854|ref|ZP_00948384.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1]
 gi|83842697|gb|EAP81864.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1]
          Length = 249

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 10/81 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+LG G GA  L L    P  +  GV+I      +A+ N      +  F+ +++D  +
Sbjct: 48  RVLELGCGVGAASLCLGARVPGLQLTGVEIQPAYAALARRN------NPAFEVVEADIDA 101

Query: 160 SVEGL----FDVIVSNPPYIE 176
               L    FD +++NPPY +
Sbjct: 102 MPLALRQRQFDHVLANPPYFD 122


>gi|71002480|ref|XP_755921.1| TAM domain methyltransferase [Aspergillus fumigatus Af293]
 gi|66853559|gb|EAL93883.1| TAM domain methyltransferase, putative [Aspergillus fumigatus
           Af293]
 gi|159129976|gb|EDP55090.1| TAM domain methyltransferase, putative [Aspergillus fumigatus
           A1163]
          Length = 274

 Score = 38.9 bits (89), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LLV   L +  P +      RILD+GTGTG   L +  + P  + VG D+S      A 
Sbjct: 19  KLLVGGDL-YRAPILNDGRPKRILDVGTGTGIWALEMADDFPDAEIVGTDLSPIQPNWAP 77

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            N   N      D  +SDW  +    FD I
Sbjct: 78  PNCTFN-----VDDAESDWTFTPAEAFDYI 102


>gi|330684125|gb|EGG95874.1| type I restriction-modification system, M subunit [Staphylococcus
           epidermidis VCU121]
          Length = 518

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 96  RDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           +D +R + D   G+G++ L + KE+  ++  G + +     +A+ N + + V  E FD  
Sbjct: 221 KDQLRNVYDPTCGSGSLLLRVGKETKVYRYNGQERNNTTYNLARMNMLLHDVRYENFDIQ 280

Query: 154 QSDWFSS---VEGLFDVIVSNPPY 174
            +D   +   +E  FD +V+NPPY
Sbjct: 281 NADTLENPAFMEEKFDAVVANPPY 304


>gi|300789901|ref|YP_003770192.1| hypothetical protein AMED_8087 [Amycolatopsis mediterranei U32]
 gi|299799415|gb|ADJ49790.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 455

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 26/38 (68%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LDLG G+GA+   L KE  F + VGVD+S  AL IA+
Sbjct: 280 VLDLGCGSGALLRVLEKERSFTEIVGVDVSSSALAIAE 317


>gi|291484992|dbj|BAI86067.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 311

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92
            W+ +Y+         +  + + + P    EL++  D  +AF             +L R 
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERF 172

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++K D  +++D+GTG+G  ++  A+LK          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLKAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
              Q++    +EG  DVIV+N
Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248


>gi|269103647|ref|ZP_06156344.1| ribosomal protein L11 methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163545|gb|EEZ42041.1| ribosomal protein L11 methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 294

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 26/131 (19%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P PE   +L+D  LAF           L  ++ +D+    ++D G G+G + +A LK   
Sbjct: 123 PEPEAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171
             K +G+DI  +A+  ++ NA  NGV++  +  L  D    ++   DV+V+N        
Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVADNLELYLPQDQPEGIQA--DVVVANILAGPLRE 239

Query: 172 -PPYIESVIVD 181
             P I+S++ D
Sbjct: 240 LSPVIKSLVKD 250


>gi|228937337|ref|ZP_04099984.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228963133|ref|ZP_04124303.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228970223|ref|ZP_04130883.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976793|ref|ZP_04137206.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407]
 gi|228782889|gb|EEM31054.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407]
 gi|228789458|gb|EEM37377.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228796518|gb|EEM43956.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228822295|gb|EEM68276.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326937826|gb|AEA13722.1| methyltransferase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 246

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG   V L LL      K  GV+I  +  ++   +   NG+ ER   +  D    
Sbjct: 48  LLDLCTGNAVVPL-LLSTRTKGKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDM 106

Query: 161 VEGL----FDVIVSNPPYIES 177
            E L    +DV+  NPPY ++
Sbjct: 107 PEKLGRHQYDVVTCNPPYFQT 127


>gi|227889783|ref|ZP_04007588.1| possible rRNA (guanine-N(2)-)-methyltransferase [Lactobacillus
           johnsonii ATCC 33200]
 gi|227849647|gb|EEJ59733.1| possible rRNA (guanine-N(2)-)-methyltransferase [Lactobacillus
           johnsonii ATCC 33200]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G+GA+ +  +    + + V VDIS +A ++ K N       ERF  L+     
Sbjct: 44  QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183
           +++ L      FD++  +PPY +  IV  +
Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132


>gi|183982054|ref|YP_001850345.1| methyltransferase [Mycobacterium marinum M]
 gi|183175380|gb|ACC40490.1| methyltransferase [Mycobacterium marinum M]
          Length = 249

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG G    A+   S  +   G+D S  A+E A+ NA   GVS  F    +     
Sbjct: 53  VLDPGTGPG--HHAIYYASKGYSATGIDGSATAIERARDNAAKAGVSVNFQVADATRLEG 110

Query: 161 VEGLFDVIV 169
           ++  FD +V
Sbjct: 111 LDNRFDTVV 119


>gi|157148660|ref|YP_001455979.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895]
 gi|229470499|sp|A8APY0|RLMG_CITK8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157085865|gb|ABV15543.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895]
          Length = 378

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P    V VD S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQASVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ ++ NPP+
Sbjct: 292 SGVEPFRFNAVLCNPPF 308


>gi|332363977|gb|EGJ41756.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK355]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +        V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVR-----------DFDPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R           + D  + L   I GL 
Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDIEKLEERRLLSQDVLVVCETDKDVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|308063301|gb|ADO05188.1| type I restriction enzyme M protein [Helicobacter pylori Sat464]
          Length = 543

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L++ K N + N 
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S  ++G  D IVSNPP+
Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315


>gi|224418458|ref|ZP_03656464.1| SAM dependent methyltransferase [Helicobacter canadensis MIT
           98-5491]
 gi|253827774|ref|ZP_04870659.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313141990|ref|ZP_07804183.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
 gi|253511180|gb|EES89839.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313131021|gb|EFR48638.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
          Length = 230

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 23/112 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC----- 131
           +T  L D AL +  P+       ++L++G+G+G + L   KE      V +D++      
Sbjct: 15  DTLFLYDFALKYFKPK------KQVLEVGSGSGVLGLLCAKE------VEMDLTMIEKNP 62

Query: 132 KALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           K LE+ + N   NGV  +    D L+ ++   ++  FD I+SNPP+  + ++
Sbjct: 63  KMLELCQHNLRINGVEAKLMGGDFLEYNF---LDLKFDYILSNPPFYHNGVI 111


>gi|170017344|ref|YP_001728263.1| O-methyltransferase [Leuconostoc citreum KM20]
 gi|169804201|gb|ACA82819.1| Predicted O-methyltransferase [Leuconostoc citreum KM20]
          Length = 253

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 9/79 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +DLG GTGAV L     +P   G    V+I  +  ++AK +   N +++R   ++SD  +
Sbjct: 53  VDLGAGTGAVGLFY---APKVTGKLALVEIQPELADMAKRSIAMNELTQRVSVIESDMKA 109

Query: 160 SVE----GLFDVIVSNPPY 174
             E    G  + ++SNPPY
Sbjct: 110 IFEDIQPGSVETVLSNPPY 128


>gi|118616599|ref|YP_904931.1| methyltransferase [Mycobacterium ulcerans Agy99]
 gi|118568709|gb|ABL03460.1| methyltransferase [Mycobacterium ulcerans Agy99]
          Length = 226

 Score = 38.5 bits (88), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF 150
           + E  D  RIL++G GTG + +   +  P  + +G D   +AL+ A+    T  V E RF
Sbjct: 51  QAELADCGRILEIGCGTGNLAIKAKRAQPRAEVIGSDPDPRALQRAQRK--TGNVEEVRF 108

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
           D   +      +G FD ++S+
Sbjct: 109 DQGYAQRLPYADGEFDRVLSS 129


>gi|115927295|ref|XP_789127.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115946774|ref|XP_001197252.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 237

 Score = 38.5 bits (88), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI-AKSNAVTNGV 146
           +L R+     VRILD+G GTG V   L  +   ++ + GVD+S   L++  K    +  V
Sbjct: 69  ALTRLVPNRDVRILDVGCGTGLVGQQLYDKG--YRDIHGVDMSAGLLKVLEKKQIYSKLV 126

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDP 192
             RFD   S      +G FDVI+S+  +I S +   CL   +R   P
Sbjct: 127 KARFDP--STPLQYADGYFDVIISSGVFIPSHLTHTCLPEIIRLLKP 171


>gi|116618301|ref|YP_818672.1| O-methyltransferase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097148|gb|ABJ62299.1| Predicted O-methyltransferase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 254

 Score = 38.5 bits (88), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 9/79 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           +DLG+GTGAV L     +P   G    V+I  +  E+A+ +   N + ER   +Q+D   
Sbjct: 53  VDLGSGTGAVGLFY---APKVTGEIKLVEIQPELAEMAQRSIELNNLHERVSVVQADMKD 109

Query: 158 -FSSVE-GLFDVIVSNPPY 174
            F+ ++ G  + I++NPPY
Sbjct: 110 IFNEIKPGSVETILTNPPY 128


>gi|240103925|ref|YP_002960234.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
 gi|239911479|gb|ACS34370.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
          Length = 421

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+LDL +G G   + L K    F   GV+++  A+E+A  N   NGV+ +F   +++
Sbjct: 281 DGERVLDLYSGVGTFGVYLAKRG--FTVEGVEVNPFAVEMANRNTEINGVNAQFRVGRAE 338

Query: 157 WFSSVEGLFDVIVSNPP 173
              +  G +D ++ +PP
Sbjct: 339 --ETPIGDYDTVIVDPP 353


>gi|254459389|ref|ZP_05072810.1| methyltransferase small [Campylobacterales bacterium GD 1]
 gi|207084002|gb|EDZ61293.1| methyltransferase small [Campylobacterales bacterium GD 1]
          Length = 231

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G V L + +++P  K   V+     +E A  N+  N +   +   ++D+  
Sbjct: 31  RVLDVGAGCGIVGLLVARDNPKVKLEAVEKQEAFVEYATINSRVNKID--YKIHKNDFVE 88

Query: 160 SVEGL-FDVIVSNPPY 174
             E + +D I+SNPP+
Sbjct: 89  LDENIKYDYIISNPPF 104


>gi|319956879|ref|YP_004168142.1| methyltransferase type 11 [Nitratifractor salsuginis DSM 16511]
 gi|319419283|gb|ADV46393.1| Methyltransferase type 11 [Nitratifractor salsuginis DSM 16511]
          Length = 194

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A SL R+        LDL  GTG   LAL +    ++   VD+S  AL+I    A  +G+
Sbjct: 26  AKSLERLPAHQPGLALDLACGTGRNTLALARRG--WQVDAVDLSPVALQILTEQAQQSGL 83

Query: 147 SERFDTLQSDW--FSSVEGLFDVIV 169
           ++R  T   D   FS+ E  +D+I+
Sbjct: 84  ADRIRTSMEDLDTFSAPEEHYDLIL 108


>gi|260893156|ref|YP_003239253.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4]
 gi|260865297|gb|ACX52403.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4]
          Length = 436

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTL 153
           R++D   G G + L L +++   + +G++IS +A+ +A  NA  NG+S         + +
Sbjct: 293 RVIDAYCGVGTITLFLARKAA--QVIGIEISPEAVALASVNAAQNGLSHVSFVKGAAEEV 350

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             +  +  EG+FD++V +PP  + V    L   VR   PR+
Sbjct: 351 LPELLAR-EGMFDLVVLDPPR-QGVKQAALESLVRAQVPRV 389


>gi|194770513|ref|XP_001967337.1| GF20002 [Drosophila ananassae]
 gi|190618099|gb|EDV33623.1| GF20002 [Drosophila ananassae]
          Length = 222

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 13/110 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----- 126
           +EP  ++ LL+D AL   L  +EK      +++G+G+G +  AL K+     G G     
Sbjct: 18  YEPAEDSFLLLD-ALEKDLNFLEKLKPSLCVEIGSGSGVIITALAKKI----GTGSICLA 72

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
            DI+ KA +  +  AV NG   R   ++ +   ++     DV++ NPPY+
Sbjct: 73  TDINLKACDATRKTAVRNGA--RVCPIRCNLTDALRSRTVDVLLFNPPYV 120


>gi|189499722|ref|YP_001959192.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1]
 gi|189495163|gb|ACE03711.1| Methyltransferase type 11 [Chlorobium phaeobacteroides BS1]
          Length = 267

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           +LDLG+G G  C LA  K  P    +GVD++   +E A++NA  NGV    F   + +  
Sbjct: 76  VLDLGSGAGFDCFLAAAKVGPQGNVIGVDMTPAMIEKARANAKNNGVENVEFRLGEIENL 135

Query: 159 SSVEGLFDVIVSN 171
              +   DV++SN
Sbjct: 136 PVADNSVDVVISN 148


>gi|297582440|ref|YP_003698220.1| methyltransferase small [Bacillus selenitireducens MLS10]
 gi|297140897|gb|ADH97654.1| methyltransferase small [Bacillus selenitireducens MLS10]
          Length = 201

 Score = 38.5 bits (88), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++S   F+ P  E      +LD+G G G + +AL   +   +   +D++ +++E+A
Sbjct: 46  SRLLIES---FTEPETEGD----LLDIGCGWGPIGIALAMSTDQRRINMIDVNERSVELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD----VIVSNPP 173
           + NA  NGV++     Q D   + EGL       I++NPP
Sbjct: 99  RLNAEANGVADNVHIEQRD---ATEGLPGDGCAAILTNPP 135


>gi|315498624|ref|YP_004087428.1| methyltransferase small [Asticcacaulis excentricus CB 48]
 gi|315416636|gb|ADU13277.1| methyltransferase small [Asticcacaulis excentricus CB 48]
          Length = 244

 Score = 38.5 bits (88), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTL 153
           +  V  L+LG G G V L+L+   P    VG++       + + N    G   R     +
Sbjct: 41  KRAVSALELGCGVGGVILSLVARCPLVHVVGIERDEATFAVTQINLAQAGGDHRAILGDI 100

Query: 154 QSDWFSSVEGLFDVIVSNPPYIE 176
            + + S     FD+++SNPPY +
Sbjct: 101 GAGYRSFDLARFDLVLSNPPYFD 123


>gi|154276818|ref|XP_001539254.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414327|gb|EDN09692.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 508

 Score = 38.5 bits (88), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 84/232 (36%), Gaps = 66/232 (28%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE--------LLVDSALAFS 89
           L   + R  +   +  ILG + F ++ +        PRPETE        LL+       
Sbjct: 88  LREMVRRRARGVPLQYILGDQPFGDLEMLCRRGVLIPRPETESYTARVANLLLSELAPTR 147

Query: 90  LPRIEKRD--------VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137
              +  RD         +RI+DL TGTG + L L        P  +  GVDIS +AL +A
Sbjct: 148 RKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISTRALRLA 207

Query: 138 KSNAVTN----GVSERF---------DTLQSDWFSSVEGLF------------------- 165
           + N   N     +SER          D L     S + GL+                   
Sbjct: 208 RENLKHNIALGTLSERARDEVSFVKGDVLSGQ--SELSGLYTSSVTPASKTAAAAAAAAA 265

Query: 166 ----------DVIVSNPPYIESV--IVDCLGLEVRDFDPRISLDGGIDGLSH 205
                      +++SNPPYI             VR ++P+++L     G  H
Sbjct: 266 AAEPEINPVITILLSNPPYISPAQFANGTTARSVRRYEPKLALVPPARGPIH 317


>gi|329667531|gb|AEB93479.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G+GA+ +  +    + + V VDIS +A ++ K N       ERF  L+     
Sbjct: 44  QVLDLYAGSGALGIEAVSRG-YDEAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183
           +++ L      FD++  +PPY +  IV  +
Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132


>gi|294651383|ref|ZP_06728701.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292822738|gb|EFF81623.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 341

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A  +P + +    +I D G G G +   L K  P      +D+   AL   +   
Sbjct: 179 LDTGTAVLVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTF 238

Query: 142 VTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG++     LQ    F+      D IVSNPP+ + +  D
Sbjct: 239 QRNGLNLAHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD 279


>gi|219110143|ref|XP_002176823.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411358|gb|EEC51286.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 403

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD-- 156
           R+L++  G GA  + L K     K + +++  + +   + N + NG+ SE  D +  D  
Sbjct: 257 RLLEMYCGCGAHTIPLAKTGLLSKILAIELDERLVRACQQNILLNGIDSELIDMVSQDAG 316

Query: 157 -WFSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            W    E  FD+I+ +PP     ESV   C      DF   + +  G D L
Sbjct: 317 KWSQRCESSFDIILVDPPRQGLDESV---CQMATRGDFQHMLYISCGRDAL 364


>gi|213583008|ref|ZP_03364834.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 262

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS
Sbjct: 199 KVLDVGCGAGVLSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFS 256

Query: 160 SVEGLF 165
            V+G F
Sbjct: 257 EVKGRF 262


>gi|167573072|ref|ZP_02365946.1| hypothetical protein BoklC_24763 [Burkholderia oklahomensis C6786]
          Length = 329

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           +F P+PE  +L             K    +I+DLG+G+G   + +L +    +GVGVD+S
Sbjct: 139 SFYPQPERAIL-------------KLRPKKIVDLGSGSGGFLIRMLHQLDGARGVGVDLS 185

Query: 131 CKALEIAKSNAVTNGVSERFDTLQ 154
             A   AK  A  NG +ER + L 
Sbjct: 186 ETATAQAKQAAEANGFAERLEFLH 209


>gi|153868815|ref|ZP_01998555.1| O-methyltransferase, family 2 [Beggiatoa sp. PS]
 gi|152074608|gb|EDN71446.1| O-methyltransferase, family 2 [Beggiatoa sp. PS]
          Length = 332

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++LDLG GTG+  +AL + +P  K V VD   + LEIA+     N +S+R   ++ D
Sbjct: 161 KLLDLGGGTGSYSIALCQANPQLKAVIVD-QKEPLEIAQRLVDENQLSDRITLIEGD 216


>gi|91216322|ref|ZP_01253289.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Psychroflexus torquis ATCC 700755]
 gi|91185460|gb|EAS71836.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Psychroflexus torquis ATCC 700755]
          Length = 243

 Score = 38.5 bits (88), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++K +   ILD+ TGTG + +A+  +S   K VG+DIS   L++ K       +++R + 
Sbjct: 53  VKKTNPKYILDVATGTGDLAIAMA-DSDAEKIVGLDISAGMLQVGKDKIQKKKLNKRIEM 111

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +Q+D              N PY +       +   VR+F+   +LD G+  +  YR ++ 
Sbjct: 112 VQAD------------SENLPYPDHTFDAITVAFGVRNFE---NLDKGLSEI--YRVLSP 154

Query: 212 G 212
           G
Sbjct: 155 G 155


>gi|283779451|ref|YP_003370206.1| hypothetical protein Psta_1671 [Pirellula staleyi DSM 6068]
 gi|283437904|gb|ADB16346.1| protein of unknown function Met10 [Pirellula staleyi DSM 6068]
          Length = 428

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 8/81 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL   TG   +   K     + +GVD+  + L++AK NA  N V  RF  +Q+D F+ 
Sbjct: 242 VLDLCCYTGGFAVQAKKLGGASEVIGVDLDEEPLKLAKENANLNQVRCRF--VQADAFAY 299

Query: 161 VEGL------FDVIVSNPPYI 175
           +  +      FDV+V +PP +
Sbjct: 300 MRDMQSSGRKFDVVVLDPPKL 320


>gi|255527290|ref|ZP_05394170.1| methyltransferase [Clostridium carboxidivorans P7]
 gi|296188353|ref|ZP_06856745.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7]
 gi|255509028|gb|EET85388.1| methyltransferase [Clostridium carboxidivorans P7]
 gi|296047479|gb|EFG86921.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7]
          Length = 246

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +++     ++DL TGTG V   L  ++   K VG++I  + +E+A  + 
Sbjct: 33  VDAVLLANFAVVKRN--AEVIDLCTGTGIVPFILAGKTEASKIVGIEIQEEMVEMADRSC 90

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPY 174
           + N + ++   + +D     F       DV+  NPPY
Sbjct: 91  MFNKLEDKIKFINTDLKDLKFLKNLSKVDVVTVNPPY 127


>gi|118618639|ref|YP_906971.1| methyltransferase [Mycobacterium ulcerans Agy99]
 gi|118570749|gb|ABL05500.1| methyltransferase [Mycobacterium ulcerans Agy99]
          Length = 249

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG G    A+   S  +   G+D S  A+E A+ NA   GVS  F    +     
Sbjct: 53  VLDPGTGPG--HHAIYYASKGYSATGIDGSATAIERARDNAAKAGVSVNFQVADATRLEG 110

Query: 161 VEGLFDVIV 169
           ++  FD +V
Sbjct: 111 LDNRFDTVV 119


>gi|49475843|ref|YP_033884.1| ribosomal protein L11 methyltransferase [Bartonella henselae str.
           Houston-1]
 gi|49238651|emb|CAF27895.1| Ribosomal protein l11 methyltransferase [Bartonella henselae str.
           Houston-1]
          Length = 289

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++  +    LDLGTG+G  A+ +A+LK       +  DI   A+++A+ N   NGV +  
Sbjct: 146 LQNENPQNALDLGTGSGILAIGIAMLKP---ISVLASDIDPVAIQVAQHNIQLNGVKKYI 202

Query: 151 DTLQSDWFSSVE----GLFDVIVSN 171
            T+ +  F+  E      FD+IV+N
Sbjct: 203 TTVTATGFNHDEIASRAPFDLIVAN 227


>gi|86133209|ref|ZP_01051791.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152]
 gi|85820072|gb|EAQ41219.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152]
          Length = 483

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 62  NVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           N  +++ S  F+  P++ E L    + + L    K D   ++DL  GTG +   +  +S 
Sbjct: 300 NFEISMKS-FFQTNPKSAEKLYSKVVDYVLEDKSKVDNTVVMDLFCGTGTIGQIVASKSE 358

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147
             K VGVDI   A+E AK NA  N + 
Sbjct: 359 NAKIVGVDIVASAIEDAKENAKRNNIE 385


>gi|270290327|ref|ZP_06196552.1| methyltransferase [Pediococcus acidilactici 7_4]
 gi|304384854|ref|ZP_07367200.1| methyltransferase [Pediococcus acidilactici DSM 20284]
 gi|270281108|gb|EFA26941.1| methyltransferase [Pediococcus acidilactici 7_4]
 gi|304329048|gb|EFL96268.1| methyltransferase [Pediococcus acidilactici DSM 20284]
          Length = 250

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +RD  N+++  S   F         +D+ L  +   +++    +I+DL  G GAV L L 
Sbjct: 15  YRD--NIQIIQSPSVFS------FSLDAVLLANFAEVKQSSKAQIVDLCAGNGAVGLFLS 66

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG-LFDVIVSNP 172
           K++     + V+I  +  E+A+ + + N + ER+  L    +D   +++    D IV NP
Sbjct: 67  KKTNGHVTM-VEIQSRLAEMAERSILLNDLGERYRVLNLPLADSLGTIKTDSVDSIVCNP 125

Query: 173 PY 174
           PY
Sbjct: 126 PY 127


>gi|237740339|ref|ZP_04570820.1| methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422356|gb|EEO37403.1| methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P +E       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G ++R    ++D   +VE L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           +    L
Sbjct: 127 ITTKVL 132


>gi|301059346|ref|ZP_07200273.1| methyltransferase domain protein [delta proteobacterium NaphS2]
 gi|300446575|gb|EFK10413.1| methyltransferase domain protein [delta proteobacterium NaphS2]
          Length = 248

 Score = 38.5 bits (88), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+GTGTG   + L +    F  +G+DIS K +  A+ NA   G+   F T  ++   
Sbjct: 48  RAIDVGTGTGQFAIYLGRLG--FHVIGIDISEKMVRKARDNAQEYGLRIDFQTQDAEDLL 105

Query: 160 SVEGLFDVIVS 170
             +  FDVIVS
Sbjct: 106 FKDNTFDVIVS 116


>gi|288916265|ref|ZP_06410644.1| Methyltransferase type 11 [Frankia sp. EUN1f]
 gi|288352244|gb|EFC86442.1| Methyltransferase type 11 [Frankia sp. EUN1f]
          Length = 225

 Score = 38.5 bits (88), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G GTG    ALL  S     VGVD S  A+E AK+ A   G+  RF    +   +
Sbjct: 53  RVLDVGCGTGE--HALLAASLGLDVVGVDTSALAIERAKAKAAERGLRARFRVENALRLA 110

Query: 160 SVEGLFDVIV 169
            +   FD ++
Sbjct: 111 DLPERFDTVL 120


>gi|329575569|gb|EGG57106.1| putative type I restriction-modification system, M subunit
           [Enterococcus faecalis TX1467]
          Length = 357

 Score = 38.5 bits (88), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     + K V   G +++      AK N + +GV    
Sbjct: 43  EDKKLFSVFDPTMGSGSLMLNVRNYLNYPKSVKYHGQELNTTTFNHAKMNLILHGVEAED 102

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 103 MNLRNGDTLNKDWPTDEPYTFDSVVMNPPY 132


>gi|325860566|ref|ZP_08173670.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A]
 gi|325481951|gb|EGC84980.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A]
          Length = 232

 Score = 38.5 bits (88), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L + +  P      V++   A+  A  N V +   +R + + +   D+
Sbjct: 36  ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95

Query: 158 FSSVEGLFDVIVSNPPY 174
                  ++ IV NPPY
Sbjct: 96  HPQNGCRYEAIVCNPPY 112


>gi|284107018|ref|ZP_06386331.1| O-methyltransferase, family 2:Generic methyltransferase [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829996|gb|EFC34274.1| O-methyltransferase, family 2:Generic methyltransferase [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 338

 Score = 38.5 bits (88), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +++ +D   +LD+G G G   L  LK +P  +  GV     ALE+AK  A      +R  
Sbjct: 158 QLDLKDAKTLLDVGGGPGTYALEFLKNNPTLQ-AGVWDRAPALEVAKEIAKPLRHGKRLS 216

Query: 152 TLQSDWF-SSVEGLFDVI-VSN 171
               D F + V G FDV+ VSN
Sbjct: 217 CYAGDLFDNPVPGKFDVMWVSN 238


>gi|157364267|ref|YP_001471034.1| methyltransferase small [Thermotoga lettingae TMO]
 gi|157314871|gb|ABV33970.1| methyltransferase small [Thermotoga lettingae TMO]
          Length = 210

 Score = 38.5 bits (88), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++LV+ A+             ++LDLG G G V + +  E P  +    D++ +A+E A
Sbjct: 56  TKILVEHAIVHGK---------KVLDLGCGYGVVGIVVKGEYPDSEVYMSDVNERAVEFA 106

Query: 138 KSNAVTNG--VSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + NA  N   V+ +  +    W    E  FDVI+ NPP
Sbjct: 107 RINAKDNNVDVTIKCGSFYDPW---QEEKFDVILLNPP 141


>gi|194335867|ref|YP_002017661.1| type I restriction-modification system, M subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308344|gb|ACF43044.1| type I restriction-modification system, M subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 544

 Score = 38.5 bits (88), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 16/111 (14%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF---KGVGVDISCKALEIAKSNAVTNGVSE-- 148
           +K+ ++ +LD   G+G++ L + K+   +   K  G + +     +A+ N + +GV +  
Sbjct: 229 KKKYLISVLDFACGSGSLLLNVRKKMGQYGIGKIYGQESNITTYNLARMNMLLHGVKDSE 288

Query: 149 ----RFDTLQSDW------FSSVEGLFDVIVSNPPY-IESVIVDCLGLEVR 188
                 DTL +DW        + +  FD +V+NPP+     + D LG +VR
Sbjct: 289 FEIFHGDTLLNDWEMLREANPAKKKHFDAVVANPPFSYRWELTDALGDDVR 339


>gi|300361484|ref|ZP_07057661.1| probable methyltransferase [Lactobacillus gasseri JV-V03]
 gi|300354103|gb|EFJ69974.1| probable methyltransferase [Lactobacillus gasseri JV-V03]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+GA+ +  +    +   V VDIS +A +I + N       +RF  L+     
Sbjct: 44  RVLDLYAGSGALGIEAVSRG-YDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCSDNR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183
           +++ L      FD+I  +PPY +  IV  +
Sbjct: 103 AIKILNEEGKKFDLIFLDPPYAKQKIVKIM 132


>gi|254494871|ref|ZP_01052104.2| putative RNA methylase family UPF0020 [Polaribacter sp. MED152]
 gi|213690453|gb|EAQ41532.2| putative RNA methylase family UPF0020 [Polaribacter sp. MED152]
          Length = 391

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 114 ALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIV 169
           ALLK+  S  FK +G D +  A++ AK+N ++  + E       ++F+S + +F    I+
Sbjct: 248 ALLKKIRSSHFKIMGFDKAPSAIQKAKANVISANLEEFIGVHHVNFFNSTKEVFGNTTIL 307

Query: 170 SNPPYIESVIVDC 182
            NPPY E + +D 
Sbjct: 308 FNPPYGERLNIDT 320


>gi|260063140|ref|YP_003196220.1| RNA methyltransferase, TrmA family protein [Robiginitalea biformata
           HTCC2501]
 gi|88784709|gb|EAR15879.1| RNA methyltransferase, TrmA family protein [Robiginitalea biformata
           HTCC2501]
          Length = 509

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF-----DTL 153
           R+ DL TG G +   + +++   + +G++    A+E A+ NA  NG+S  RF       L
Sbjct: 362 RVYDLYTGLGTIAQFVARQA--REVIGIEAVADAIEAARVNAAENGISNTRFFAGDMKEL 419

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
            +  F    G  DV++++PP
Sbjct: 420 FTSEFLETHGRPDVVITDPP 439


>gi|324995254|gb|EGC27166.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK678]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           R+LDL  G+G++ +  +        V V+   +A  I   N      SERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEAISRG-METAVLVEKDRRAQAIISENIQMTKESERFDLLKMESGR 105

Query: 157 WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204
              ++ G FD+++ +PPY  E ++ D   LE           V + +  + L   I GL 
Sbjct: 106 ALDTLTGAFDLVLLDPPYAKEQIVADLEKLEEGQLLSQDVLVVCETEKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|296418756|ref|XP_002838991.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634985|emb|CAZ83182.1| unnamed protein product [Tuber melanosporum]
          Length = 372

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+     F+ P  EK    RILD+GTGTG   + + ++ P  + +  D+S       + 
Sbjct: 120 LLMTGGSLFAAPLDEKNPPQRILDIGTGTGIWAVDIAEQFPSAEVIATDLSP-----IQP 174

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           N V   +    D  Q DW    E  FD I
Sbjct: 175 NWVPPNLRFEIDDAQDDWTWGDE-TFDYI 202


>gi|262831253|sp|Q8EI95|TRMN6_SHEON RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 236

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           +ILD+G G+G + L   + S   +   V++  KA      N V +  ++R   +  D   
Sbjct: 37  QILDIGAGSGLLSLMAAQRS-LGRITAVELEEKAAAACLYNMVQSPWADRLSVIHCDIQD 95

Query: 157 --WFSSVEGLFDVIVSNPPYIE 176
               +   G FD I+ NPPY E
Sbjct: 96  FCQQTQYHGFFDHIICNPPYFE 117


>gi|227822632|ref|YP_002826604.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii
           NGR234]
 gi|254783311|sp|C3MEL0|PRMA_RHISN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|227341633|gb|ACP25851.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii
           NGR234]
          Length = 291

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R V  +LDLGTG+G + +A  K      G+  DI   A  +A  NA  NGV +      +
Sbjct: 150 RRVRNVLDLGTGSGVLAIAAWK-LLHVPGLATDIDPVATRVASDNARRNGVVDGLTFATA 208

Query: 156 DWFSS----VEGLFDVIVSN 171
             F S      G FD++++N
Sbjct: 209 PGFHSTAFGTHGPFDLVIAN 228


>gi|160933690|ref|ZP_02081078.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753]
 gi|156867567|gb|EDO60939.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753]
          Length = 460

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 11/94 (11%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     ++K D V  LDL  GTG + + +  ++   K +GV++  +A+E AK+NAV NG
Sbjct: 298 LAGEYASLQKEDTV--LDLYCGTGTIGMTMASKA--GKVIGVEVVPEAIEDAKANAVRNG 353

Query: 146 VSERFDTLQSDWFSSVEGLFD------VIVSNPP 173
           V +  + +  D   +V+ L        V+V +PP
Sbjct: 354 V-KNIEFICGDSAQAVQMLRKRGERPTVVVVDPP 386


>gi|16125773|ref|NP_420337.1| 50S ribosomal protein L11 methyltransferase [Caulobacter crescentus
           CB15]
 gi|221234531|ref|YP_002516967.1| ribosomal protein L11 methyltransferase [Caulobacter crescentus
           NA1000]
 gi|38605457|sp|Q9A838|PRMA_CAUCR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|13422907|gb|AAK23505.1| ribosomal protein L11 methyltransferase, putative [Caulobacter
           crescentus CB15]
 gi|220963703|gb|ACL95059.1| ribosomal protein L11 methyltransferase [Caulobacter crescentus
           NA1000]
          Length = 288

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 10/83 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+ R   ++LD+G GTG + +A  +       VG DI   ++ I+K NA+ N  + R   
Sbjct: 145 IKARRFNKVLDVGAGTGLLAIAAARTGAKL-AVGTDIDKPSVRISKENALVNKANAR--- 200

Query: 153 LQSDWFSSVEGLFDVIVS-NPPY 174
                F    GL + +V+ N PY
Sbjct: 201 -----FVHASGLSNRLVAENAPY 218


>gi|30262853|ref|NP_845230.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Ames]
 gi|47528184|ref|YP_019533.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49185701|ref|YP_028953.1| UbiE/COQ5 family methlytransferase [Bacillus anthracis str. Sterne]
 gi|65320176|ref|ZP_00393135.1| COG0500: SAM-dependent methyltransferases [Bacillus anthracis str.
           A2012]
 gi|227814301|ref|YP_002814310.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC
           684]
 gi|254685448|ref|ZP_05149308.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. CNEVA-9066]
 gi|254722857|ref|ZP_05184645.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. A1055]
 gi|254737906|ref|ZP_05195609.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. Western North America USA6153]
 gi|254742921|ref|ZP_05200606.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. Kruger B]
 gi|254752220|ref|ZP_05204257.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. Vollum]
 gi|254760737|ref|ZP_05212761.1| methyltransferase, UbiE/COQ5 family protein [Bacillus anthracis
           str. Australia 94]
 gi|30257486|gb|AAP26716.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. Ames]
 gi|47503332|gb|AAT32008.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49179628|gb|AAT55004.1| methlytransferase, UbiE/COQ5 family [Bacillus anthracis str.
           Sterne]
 gi|227005462|gb|ACP15205.1| methyltransferase, UbiE/COQ5 family [Bacillus anthracis str. CDC
           684]
          Length = 258

 Score = 38.5 bits (88), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|327313660|ref|YP_004329097.1| methyltransferase domain-containing protein [Prevotella denticola
           F0289]
 gi|326945039|gb|AEA20924.1| methyltransferase domain protein [Prevotella denticola F0289]
          Length = 232

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L + +  P      V++   A+  A  N V +   +R + + +   D+
Sbjct: 36  ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95

Query: 158 FSSVEGLFDVIVSNPPY 174
                  ++ IV NPPY
Sbjct: 96  HPQNGCRYEAIVCNPPY 112


>gi|319938985|ref|ZP_08013349.1| hypothetical protein HMPREF9459_00337 [Streptococcus anginosus
           1_2_62CV]
 gi|319812035|gb|EFW08301.1| hypothetical protein HMPREF9459_00337 [Streptococcus anginosus
           1_2_62CV]
          Length = 107

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +++ ++E+++V  ILD+G G G   L L +  P  K +G+DIS  A+  AK
Sbjct: 48  WAISQLEQQNVKNILDVGIGNGQSTLYLKQYFPNSKVIGIDISKTAITQAK 98


>gi|306820892|ref|ZP_07454512.1| possible SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551006|gb|EFM38977.1| possible SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 249

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +K D+  IL+LG GTG +   LL+    ++ VGVDIS + L IAK   V
Sbjct: 36  DKEDIKNILELGCGTGNITQRLLEYG--YEVVGVDISGEMLSIAKEKLV 82


>gi|311113255|ref|YP_003984477.1| methyltransferase domain-containing protein [Rothia dentocariosa
           ATCC 17931]
 gi|310944749|gb|ADP41043.1| methyltransferase domain protein [Rothia dentocariosa ATCC 17931]
          Length = 248

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V +T ++  F P       +D   A  L ++ +     +LD+G G G + L+L   +P 
Sbjct: 67  QVSVTTANGIFSPSG-----IDKGTAVLLAQVPEPHGKYMLDIGCGWGPITLSLAMLAPQ 121

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +  G+D++ ++L + + NA   G+     +   +   ++   FD I SNPP
Sbjct: 122 SEVYGIDVNSRSLSLTEQNARALGLHNVSVSTPDEIDPTLR--FDTIWSNPP 171


>gi|294782567|ref|ZP_06747893.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 1_1_41FAA]
 gi|294481208|gb|EFG28983.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 1_1_41FAA]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P +E       LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIIAPYVENS---VFLDLFSGSGSISLEAVSRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G ++R    ++D   +VE L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFTDRCRAYKNDVVRAVEILGRKKEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           +    L
Sbjct: 127 ITTKVL 132


>gi|311232731|gb|ADP85585.1| methyltransferase small [Desulfovibrio vulgaris RCH1]
          Length = 478

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DLGTG G V LALL  S    GVG++     +  A++NA   G+S RF    +D
Sbjct: 206 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARANAHRLGLSTRFTVHHAD 259


>gi|226951700|ref|ZP_03822164.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           ATCC 27244]
 gi|226837565|gb|EEH69948.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           ATCC 27244]
          Length = 341

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A  +P + +    +I D G G G +   L K  P      +D+   AL   +   
Sbjct: 179 LDTGTAVLVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTF 238

Query: 142 VTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG++     LQ    F+      D IVSNPP+ + +  D
Sbjct: 239 QRNGLNLAHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD 279


>gi|226713008|sp|A3M8J9|RSMC_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|193078279|gb|ABO13243.2| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 17978]
          Length = 337

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|154322403|ref|XP_001560516.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10]
 gi|150847878|gb|EDN23071.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10]
          Length = 230

 Score = 38.5 bits (88), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 18/87 (20%)

Query: 125 VGVDISCKALEIAKSNAVTNGV------SERF---DTL--QSDWFSSVEGLFDVIVSNPP 173
           VG+DIS KAL+++  N   N +      S RF   D L  +       +G+ DVIVSNPP
Sbjct: 31  VGLDISKKALDLSIQNVRFNDLKRSAQQSVRFEFSDVLGDEEKILDKFQGVCDVIVSNPP 90

Query: 174 YIESVIVDCLGLE----VRDFDPRISL 196
           YI     D    E    VR+++P+++L
Sbjct: 91  YISE---DGFNKETTRSVRNWEPKLAL 114


>gi|319954120|ref|YP_004165387.1| 23S rRNA m(5)u-1939 methyltransferase [Cellulophaga algicola DSM
           14237]
 gi|319422780|gb|ADV49889.1| 23S rRNA m(5)U-1939 methyltransferase [Cellulophaga algicola DSM
           14237]
          Length = 472

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           + DL TGTG +   + K++   K VG++   +A+E AK+NA+ N +            + 
Sbjct: 328 VYDLYTGTGTIAQFVAKKAK--KVVGIEAVPEAIEDAKANAIFNKIENTSFFAGDMKNIF 385

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           ++ F    G  D+I+++PP
Sbjct: 386 NEEFIRENGTPDIIITDPP 404


>gi|303248941|ref|ZP_07335188.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
 gi|302489664|gb|EFL49600.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
          Length = 255

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 31/169 (18%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           RIEK DV R+LD+G G G     L +  P  +  G+D S + +  A+  A +    E  D
Sbjct: 25  RIEKEDVKRVLDVGCGPGNSSEVLARRFPRARVRGIDSSPEMIGSAR-QAHSEIDFELCD 83

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             +     S+EG +DV+ SN                            I  +  ++ +  
Sbjct: 84  AGKE--LESLEGGYDVVFSN--------------------------ACIQWVPDHKALLK 115

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +   L   G+ +V+I  NQ   + +I    +L   +A+KD   N RV 
Sbjct: 116 NMMGLLAPGGVLAVQIPMNQHEPIHKIIG--ELVTSDAWKDAFPNPRVF 162


>gi|300813552|ref|ZP_07093883.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300512300|gb|EFK39469.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 301

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +L +  K+D+  I D+G G+G + +A +K       + VDI  K ++ +K NA  N V +
Sbjct: 157 ALDKYVKKDM-SIFDIGCGSGILGIAAIKLGGKSATL-VDIDDKCIKASKENAKLNEVYD 214

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +    + +    +EG  D+IVSN   I  +IVD
Sbjct: 215 KVKVKKGNLLDVIEGKCDIIVSN--IIAEIIVD 245


>gi|296139974|ref|YP_003647217.1| methyltransferase type 11 [Tsukamurella paurometabola DSM 20162]
 gi|296028108|gb|ADG78878.1| Methyltransferase type 11 [Tsukamurella paurometabola DSM 20162]
          Length = 323

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)

Query: 29  VLDDRQRFFLTNAIVR----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           +L   QR   T  +VR    +  H   H  LG  D+  +   L S+            D+
Sbjct: 16  LLKQHQRLPETRGLVRVDDMTHDHSHAHTELGIHDWAAMAAELESE-----------ADT 64

Query: 85  ALAFSLPRIEKRDV-------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            L + +  ++  D         RILD+G G G     L +  P  + + VD S + LE+A
Sbjct: 65  YLPYVIGALDDFDARRCGPAPSRILDVGAGPGVFTAELARRYPDAEVIAVDGSPELLELA 124

Query: 138 KSNAVTNGVSERFDTLQSD 156
           +  A   G++   +TL++D
Sbjct: 125 RDRAARAGLT--IETLRTD 141


>gi|237753106|ref|ZP_04583586.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375373|gb|EEO25464.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 266

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 90  LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L R+ K  V+  RILD G GTG  C    K    +K VGVD+S   +E AK N
Sbjct: 33  LLRLFKECVIGDRILDFGCGTGIFCEYFAKNG--YKVVGVDVSFDMIEYAKKN 83


>gi|311741682|ref|ZP_07715504.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311303203|gb|EFQ79284.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 227

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDLG GTG +   L  ES + +   VG D+S  A+ IA+  A  +G+  + +   +D
Sbjct: 55  ARVLDLGCGTGWLARTLAAESRYRRANIVGYDLSPNAIRIARERAAADGLGAQTEFHVAD 114

Query: 157 WFSSVEG 163
             + + G
Sbjct: 115 ILTPLAG 121


>gi|184159405|ref|YP_001847744.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU]
 gi|332876245|ref|ZP_08444020.1| methyltransferase small domain protein [Acinetobacter baumannii
           6014059]
 gi|226712933|sp|B2HYF8|RSMC_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|183210999|gb|ACC58397.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU]
 gi|322509317|gb|ADX04771.1| rsmC [Acinetobacter baumannii 1656-2]
 gi|323519344|gb|ADX93725.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii TCDC-AB0715]
 gi|332735517|gb|EGJ66569.1| methyltransferase small domain protein [Acinetobacter baumannii
           6014059]
          Length = 337

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|163794459|ref|ZP_02188430.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199]
 gi|159180183|gb|EDP64706.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199]
          Length = 292

 Score = 38.5 bits (88), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 20/124 (16%)

Query: 68  SSDTFEPRP--ETELLVDSALAF--------SLPRIEKRDVVR------ILDLGTGTGAV 111
           SS   E +P    EL+VD+A AF        +L     +D+VR      +LDLG G+G +
Sbjct: 105 SSHVTETKPAGSIELIVDAARAFGSGSHATTALCLRALQDLVRRRRPRRVLDLGCGSGIL 164

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSV---EGLFDV 167
            +A  K  P  + V VD+   ++  A  NA  NG + R  T  S  W + +      +D+
Sbjct: 165 AMATAKLVPSSRIVAVDLDPPSVTTAAENARLNGTATRIRTAVSRGWRAPLVRRTAPYDL 224

Query: 168 IVSN 171
           +++N
Sbjct: 225 VLAN 228


>gi|319947370|ref|ZP_08021603.1| methyltransferase [Streptococcus australis ATCC 700641]
 gi|319746612|gb|EFV98872.1| methyltransferase [Streptococcus australis ATCC 700641]
          Length = 248

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  R +  I+DL  G GAV L     +     VGV+I  +  ++A+ + 
Sbjct: 33  IDSVLLSRFPKLPNRGL--IVDLCAGNGAVGLFASTRTKA-TIVGVEIQERLADMAERSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             NG+S+R   +  D  +          D+I+ NPPY +
Sbjct: 90  QLNGLSDRMSMITDDLKNLPHHFPGSKIDLILCNPPYFK 128


>gi|315659794|ref|ZP_07912653.1| S-adenosyl-L-methionine-dependent methyltransferase [Staphylococcus
           lugdunensis M23590]
 gi|315495082|gb|EFU83418.1| S-adenosyl-L-methionine-dependent methyltransferase [Staphylococcus
           lugdunensis M23590]
          Length = 227

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 93  IEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           I K D++   ILD G   GA    L ++ PF +GVG+D++ K+L+ A+
Sbjct: 34  IAKEDIIGKTILDFGCNQGAFLRQLYQKVPFKQGVGIDLARKSLQKAE 81


>gi|315918150|ref|ZP_07914390.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692025|gb|EFS28860.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 313

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N VS E++  L  +   
Sbjct: 179 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 237

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            +E   +DV+V+N      ++ D L L ++D    +   G I
Sbjct: 238 KIEKQSYDVVVAN------ILADVLLLLLKDISSVVKTGGKI 273


>gi|308061791|gb|ADO03679.1| type I restriction enzyme M protein [Helicobacter pylori Cuz20]
          Length = 543

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTKSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174
                +TL + + S  ++G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKDLKGKMDYIVSNPPF 315


>gi|125717481|ref|YP_001034614.1| hypothetical protein SSA_0624 [Streptococcus sanguinis SK36]
 gi|125497398|gb|ABN44064.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 179

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD   G+G + +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 44  RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESCR 102

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 103 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 162

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 163 IWKQKIYGISK 173


>gi|119487323|ref|ZP_01621074.1| hypothetical protein L8106_21402 [Lyngbya sp. PCC 8106]
 gi|119455878|gb|EAW37013.1| hypothetical protein L8106_21402 [Lyngbya sp. PCC 8106]
          Length = 413

 Score = 38.5 bits (88), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R    + +RILD G GTG+    L+  +P    +G+D+S  A+ +AK     
Sbjct: 38  AAYNFCTGRTPPTENIRILDAGCGTGSSTEYLIGLNPQATVLGMDLSEGAIRVAKERTQR 97

Query: 144 NGVS 147
           +G+S
Sbjct: 98  SGIS 101


>gi|324326861|gb|ADY22121.1| methyltransferase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 261

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|309811280|ref|ZP_07705069.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
 gi|308434762|gb|EFP58605.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
          Length = 221

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G +   L   SP  +  GVD++ +AL++   N    G S       S     V
Sbjct: 63  LDVGCGWGPITTTLALRSPSAQVWGVDVNRRALDLCADNVAAQGCSNVAVAQPSQVPDHV 122

Query: 162 EGLFDVIVSNPP 173
              FD+I SNPP
Sbjct: 123 R--FDLIWSNPP 132


>gi|52142621|ref|YP_084208.1| methyltransferase [Bacillus cereus E33L]
 gi|51976090|gb|AAU17640.1| methyltransferase [Bacillus cereus E33L]
          Length = 261

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|88810697|ref|ZP_01125954.1| membrane-associated protein [Nitrococcus mobilis Nb-231]
 gi|88792327|gb|EAR23437.1| membrane-associated protein [Nitrococcus mobilis Nb-231]
          Length = 210

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  ++  +L R+  +   R+LD+G GTG +  AL +  P+    G+D S + L +A   A
Sbjct: 28  VSQSVEETLRRVPVQPSDRVLDIGCGTGTLLQALRQRYPYIALTGIDASAEMLAVA---A 84

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              G S R     +         FD++VS 
Sbjct: 85  AKLGPSARLCLASAQRLPLRGEAFDLVVST 114


>gi|326385019|ref|ZP_08206691.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395]
 gi|326196233|gb|EGD53435.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395]
          Length = 502

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 15/127 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LD+GTG G   L +         V  D + +AL +A + A  NG    +D  +   F 
Sbjct: 163 RALDVGTGCGVQALHMASHCDEI--VATDTNRRALALAAATARLNGFD--WDLREGSLFE 218

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  FD+IVSNPP++       +G   +D+   I  D G+ G    R + + +  HLN
Sbjct: 219 PVAGERFDLIVSNPPFV-------VGTGAQDY---IYRDSGMVGDDISRQLVEQIGDHLN 268

Query: 219 KDGLCSV 225
             G+  +
Sbjct: 269 PGGVAQI 275


>gi|319953443|ref|YP_004164710.1| tRNA (adenine-n(6)-)-methyltransferase [Cellulophaga algicola DSM
           14237]
 gi|319422103|gb|ADV49212.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga algicola DSM
           14237]
          Length = 243

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 19/155 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------FDTL 153
           ILD+G GTG + L L + S       +++   A E    N   +   +R       FD  
Sbjct: 40  ILDIGAGTGVISLMLAQRSYAENIEAIELDGDAFEQCTENFEASEWGDRLFCFHAGFDEF 99

Query: 154 QSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             ++         L+DVIVSNPP+    +    G + RD           +    +  + 
Sbjct: 100 VDEYTEEDPEEAELYDVIVSNPPFYSEEVSS--GDDARD-------QARQNSSLPFDELV 150

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            GVS+ L+  G+ +  I Y ++ + + +     LF
Sbjct: 151 SGVSKLLSPKGIFATIIPYKEEENFIALAAQNNLF 185


>gi|237802005|ref|ZP_04590466.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024862|gb|EGI04918.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 237

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)

Query: 63  VRLTLSSDTFEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           V L L  + + P     + LLV++  + +L R        +LDLG G+G + ++L +  P
Sbjct: 50  VELFLPPNVYHPGTGLSSSLLVEALSSENLGR-------AVLDLGCGSGYIGISLYR--P 100

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
               V  DIS  ++  +  N     +  R   L+SD FS+++GL FD I+ NPP ++  I
Sbjct: 101 GMDLVLADISKDSILSSTENLRRMEIPGR--VLESDLFSNLKGLRFDTILFNPPLLDKKI 158


>gi|239616418|ref|YP_002939740.1| methyltransferase [Kosmotoga olearia TBF 19.5.1]
 gi|239505249|gb|ACR78736.1| methyltransferase [Kosmotoga olearia TBF 19.5.1]
          Length = 187

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LDL +G+G +    L  S     V +D S  +    K NA+  G  E+   L +D+ 
Sbjct: 42  LRVLDLFSGSGIIAFEALSRSA-TNAVCIDSSRVSCNTIKKNALKLGCQEKLRILCADFR 100

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCL 183
            ++  L      FD I ++PP+ E+ I + L
Sbjct: 101 RAIPKLEKSGERFDFIFADPPFGENYIPELL 131


>gi|168218269|ref|ZP_02643894.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182379728|gb|EDT77207.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 256

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    +     FDV+  NPPY
Sbjct: 98  KINNIQDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY 134


>gi|16803926|ref|NP_465411.1| hypothetical protein lmo1887 [Listeria monocytogenes EGD-e]
 gi|224500239|ref|ZP_03668588.1| hypothetical protein LmonF1_11379 [Listeria monocytogenes Finland
           1988]
 gi|224501314|ref|ZP_03669621.1| hypothetical protein LmonFR_02125 [Listeria monocytogenes FSL
           R2-561]
 gi|254827229|ref|ZP_05231916.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254831513|ref|ZP_05236168.1| hypothetical protein Lmon1_09168 [Listeria monocytogenes 10403S]
 gi|254899417|ref|ZP_05259341.1| hypothetical protein LmonJ_06374 [Listeria monocytogenes J0161]
 gi|254912444|ref|ZP_05262456.1| methyltransferase [Listeria monocytogenes J2818]
 gi|254936771|ref|ZP_05268468.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255026341|ref|ZP_05298327.1| hypothetical protein LmonocytFSL_08325 [Listeria monocytogenes FSL
           J2-003]
 gi|284802332|ref|YP_003414197.1| hypothetical protein LM5578_2088 [Listeria monocytogenes 08-5578]
 gi|284995474|ref|YP_003417242.1| hypothetical protein LM5923_2039 [Listeria monocytogenes 08-5923]
 gi|315282908|ref|ZP_07871210.1| protein YpsC [Listeria marthii FSL S4-120]
 gi|16411340|emb|CAC99965.1| lmo1887 [Listeria monocytogenes EGD-e]
 gi|258599612|gb|EEW12937.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609367|gb|EEW21975.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|284057894|gb|ADB68835.1| hypothetical protein LM5578_2088 [Listeria monocytogenes 08-5578]
 gi|284060941|gb|ADB71880.1| hypothetical protein LM5923_2039 [Listeria monocytogenes 08-5923]
 gi|293590427|gb|EFF98761.1| methyltransferase [Listeria monocytogenes J2818]
 gi|313613446|gb|EFR87288.1| protein YpsC [Listeria marthii FSL S4-120]
          Length = 382

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|134299906|ref|YP_001113402.1| PUA domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134052606|gb|ABO50577.1| SAM-dependent methyltransferase [Desulfotomaculum reducens MI-1]
          Length = 418

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--------FD 151
           R+LD    TG   +   K     + +G+DI+  ALE+A+ NA  NG  +R        FD
Sbjct: 246 RVLDCFCHTGTFSMYATKYGAK-EVLGLDIAAPALEVARVNAQLNGYGDRCTFKECNSFD 304

Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173
            L++      E  FDV++ +PP
Sbjct: 305 ELRA--MERAEEKFDVVILDPP 324


>gi|84516360|ref|ZP_01003720.1| hypothetical protein SKA53_05478 [Loktanella vestfoldensis SKA53]
 gi|84510056|gb|EAQ06513.1| hypothetical protein SKA53_05478 [Loktanella vestfoldensis SKA53]
          Length = 401

 Score = 38.5 bits (88), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 6/55 (10%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           + +D S  AL++A+  A   GV++RF T + D F  +  L      FDV++ +PP
Sbjct: 254 LAIDGSAPALDLAEQGAAAMGVADRFSTRKGDAFDVLTALAEEGAQFDVVICDPP 308


>gi|295688864|ref|YP_003592557.1| ribosomal L11 methyltransferase [Caulobacter segnis ATCC 21756]
 gi|295430767|gb|ADG09939.1| ribosomal L11 methyltransferase [Caulobacter segnis ATCC 21756]
          Length = 288

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           I+ R   ++LD+G GTG + +A  +       VG DI   ++ IAK NA  N  + RF
Sbjct: 145 IKARKFNKVLDVGAGTGLLAIAAARTGTKL-AVGTDIDKPSVRIAKENAGVNKANARF 201


>gi|253991186|ref|YP_003042542.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782636|emb|CAQ85800.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica]
          Length = 296

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           I+D G G+G + +A LK       +G+DI  +A++ ++ NA  NGV ER    L  D  +
Sbjct: 162 IIDFGCGSGILAIAALKLG-AAHAIGIDIDPQAIQASRDNAERNGVVERLTLYLAKDQPN 220

Query: 160 SVEGLFDVIVSN 171
            +E   DV+++N
Sbjct: 221 DLES--DVVIAN 230


>gi|297563107|ref|YP_003682081.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847555|gb|ADH69575.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 498

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 6/80 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156
           V R LD+GTG G   L L   +   + V  D++ +A+ +A  +   +GV++ R +  Q  
Sbjct: 159 VERALDVGTGCGVQALHLASRA--REVVATDLNPRAVRLAGISLALSGVTDARLE--QGS 214

Query: 157 WFSSVEG-LFDVIVSNPPYI 175
            +  V G  FD+IVSNPP++
Sbjct: 215 LYEPVAGERFDLIVSNPPFV 234


>gi|313127018|ref|YP_004037288.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
 gi|312293383|gb|ADQ67843.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
          Length = 212

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +LDLGTGTGA+ LAL  ++   + VG DIS   LE A+  A   G+
Sbjct: 47  VLDLGTGTGAIALALAPDAK--RVVGRDISEGMLEQAREKAQDAGI 90


>gi|254508212|ref|ZP_05120336.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 16]
 gi|219548829|gb|EED25830.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 16]
          Length = 340

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +   +P  +    DIS  A+E +K+    N +S +     SD +S
Sbjct: 203 KVLDFGCGAGVIGSVMATLNPEIELEMCDISALAVESSKATLAANQLSGK--VFASDVYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  IVSNPP+
Sbjct: 261 DTSDDYQFIVSNPPF 275


>gi|220934355|ref|YP_002513254.1| methyltransferase type 12 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995665|gb|ACL72267.1| methyltransferase type 12 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 268

 Score = 38.5 bits (88), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  +++R   RILD+ TGTG   + L++    F  V  D S + L  A  N    G  
Sbjct: 51  FFIRALKERGARRILDVATGTGFHSVQLVEAG--FDVVSADGSAEMLAKAFENGRRRGHI 108

Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169
            R  T+QSDW      V G FD IV
Sbjct: 109 LR--TIQSDWRWLNRDVHGRFDAIV 131


>gi|331085151|ref|ZP_08334237.1| type I restriction-modification system [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407934|gb|EGG87424.1| type I restriction-modification system [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 531

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E +  +++ D   G+G++   C    +E  + K  G +I      +A+ N   + V    
Sbjct: 214 EGKKGLQVYDPCMGSGSLMLSCKNYSEEPDYIKYYGQEIMPSTYNLARMNMFLHRVHPEN 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +  +  FDV+  NPPY
Sbjct: 274 QHLRNADTLDADWPTDEDTEFDVVTMNPPY 303


>gi|325003102|ref|ZP_08124214.1| glycine sarcosine N-methyltransferase [Pseudonocardia sp. P1]
          Length = 288

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +S   F + ++ KR V  +LD+ TGTG   + LL+E   F  V  D S + L  A  N +
Sbjct: 57  ESEGKFFVEQLRKRGVKSVLDVATGTGFHSVRLLEEG--FDTVSADGSAEMLAKAFDNGM 114

Query: 143 TNGVSERFDTLQSDW---FSSVEGLFDVIV 169
             G       +Q+DW      V G +D I+
Sbjct: 115 KYG-GHILRVVQADWRWLNRDVHGEYDAII 143


>gi|313632701|gb|EFR99675.1| protein YpsC [Listeria seeligeri FSL N1-067]
 gi|313637250|gb|EFS02758.1| protein YpsC [Listeria seeligeri FSL S4-171]
          Length = 382

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLISFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|300312991|ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum
           seropedicae SmR1]
 gi|300075776|gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 241

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 9/74 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +++D+G G G     +L ES   KG    G+D+S KAL++A  +++ +GV  R++ + ++
Sbjct: 59  KVIDIGCGGG-----ILAESMALKGGDVTGIDLSDKALKVADLHSMESGVQVRYEKIAAE 113

Query: 157 WFSSVE-GLFDVIV 169
             ++ E G +DV+ 
Sbjct: 114 DMAAREAGQYDVVT 127


>gi|240171251|ref|ZP_04749910.1| hypothetical protein MkanA1_18201 [Mycobacterium kansasii ATCC
           12478]
          Length = 247

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 12/101 (11%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P+P  E LV    AF   R E      +LD GTG G   +    +   F   GVD S  A
Sbjct: 31  PQPVVEQLV----AFGGIRGE------VLDPGTGPGYHAIHYASQG--FSVTGVDGSPSA 78

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +E A+ NA   GV+  F    +      EG FD +V +  Y
Sbjct: 79  IERARRNADRAGVTVDFRVADATRLDGFEGRFDTVVDSAFY 119


>gi|239907527|ref|YP_002954268.1| hypothetical protein DMR_28910 [Desulfovibrio magneticus RS-1]
 gi|239797393|dbj|BAH76382.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 266

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 100 RILDLGTGTGAVCLALL--KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R  DLGTG GA  L  L     P    +G+D     +  A  NA   G++ERF  L  D 
Sbjct: 51  RTADLGTGCGAAGLGCLLAGADPAATCLGLDRDPDMVRAAGQNAARLGLAERFTALAVDL 110

Query: 158 FSSVEGL------FDVIVSNPPY 174
               E         D+++ NPPY
Sbjct: 111 RGIREDARCLPESCDLVICNPPY 133


>gi|229564351|sp|A4XQA3|RLMG_PSEMY RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 374

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +  D  R+ DLG G G + +A    SP  +   VD S  A++ A+ N     + E
Sbjct: 223 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAA-ALGE 281

Query: 149 RFDTLQS--DWFSSVEGLFDVIVSNPPYIESVIV 180
           R  T+++         G  D+++ NPP+ +  +V
Sbjct: 282 RPATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV 315


>gi|238898007|ref|YP_002923687.1| methylation of 50S ribosomal subunit protein L11 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|259534540|sp|C4K4P6|PRMA_HAMD5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|229465765|gb|ACQ67539.1| methylation of 50S ribosomal subunit protein L11 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 305

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A+E ++ NA  NGVSE  
Sbjct: 169 LIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAIEASRDNAQRNGVSEHL 217


>gi|182437096|ref|YP_001824815.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465612|dbj|BAG20132.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 527

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+GTG+G   L   + +   +    D++ +ALE  +     +G +   D  +
Sbjct: 175 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 231

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP+   VI     L  R        DGG+ G    R +    
Sbjct: 232 GSLFEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRALVQQS 280

Query: 214 SRHLNKDGLCS 224
             HLN+ G   
Sbjct: 281 GAHLNEGGYAQ 291


>gi|169632498|ref|YP_001706234.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii SDF]
 gi|226712934|sp|B0VRJ4|RSMC_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169151290|emb|CAO99988.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii]
          Length = 337

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|196042018|ref|ZP_03109304.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus NVH0597-99]
 gi|229091895|ref|ZP_04223084.1| Methyltransferase type 11 [Bacillus cereus Rock3-42]
 gi|196027152|gb|EDX65773.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus NVH0597-99]
 gi|228691475|gb|EEL45234.1| Methyltransferase type 11 [Bacillus cereus Rock3-42]
          Length = 261

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|116629510|ref|YP_814682.1| ribosomal protein L11 methylase [Lactobacillus gasseri ATCC 33323]
 gi|311110846|ref|ZP_07712243.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           MV-22]
 gi|122273552|sp|Q043X8|PRMA_LACGA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116095092|gb|ABJ60244.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactobacillus gasseri ATCC 33323]
 gi|311066000|gb|EFQ46340.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           MV-22]
          Length = 315

 Score = 38.5 bits (88), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N V+   +  +++  
Sbjct: 179 MSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRKANLL 236

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             ++  +D+IV+N      ++ D L   + D D  ++ +G +
Sbjct: 237 KDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 272


>gi|317058263|ref|ZP_07922748.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313683939|gb|EFS20774.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 313

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N VS E++  L  +   
Sbjct: 179 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 237

Query: 160 SVEGL-FDVIVSN 171
            +E   +DV+V+N
Sbjct: 238 KIEKQSYDVVVAN 250


>gi|289435234|ref|YP_003465106.1| hypothetical protein lse_1871 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171478|emb|CBH28022.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLISFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|220936044|ref|YP_002514943.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997354|gb|ACL73956.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7]
          Length = 195

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 7/103 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F PR      +D+     L  +E  +    LDLG G G + L L + +P  +   VD   
Sbjct: 34  FSPRG-----IDAGTRLLLDHVEVGEADDCLDLGCGYGPIGLTLARLAPKGRTCLVDKDF 88

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
            A++ +  NA  NG+    +   S+ FS+V    F VI SN P
Sbjct: 89  VAVDYSNKNARINGIGNA-EAFLSNGFSAVGNRRFQVITSNLP 130


>gi|189198237|ref|XP_001935456.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981404|gb|EDU48030.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 487

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKS 139
           L+DS         +    +R LD+GTG  A+  L  LK  P +     DI  K+ E A  
Sbjct: 323 LIDSTSPNYTSNYDPNRQIRGLDIGTGASAIYTLLCLKSRPNWSMCATDIDKKSFESAAR 382

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL-------FDVIVSNPPYIESV 178
           N   N +  R   LQ+   + +  L        D  + NPP+   V
Sbjct: 383 NLALNTLMTRTKLLQTTELNPLIPLAALGVDHLDFTICNPPFFNDV 428


>gi|24372535|ref|NP_716577.1| hypothetical protein SO_0948 [Shewanella oneidensis MR-1]
 gi|24346547|gb|AAN54022.1|AE015540_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 220

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           +ILD+G G+G + L   + S   +   V++  KA      N V +  ++R   +  D   
Sbjct: 21  QILDIGAGSGLLSLMAAQRS-LGRITAVELEEKAAAACLYNMVQSPWADRLSVIHCDIQD 79

Query: 157 --WFSSVEGLFDVIVSNPPYIE 176
               +   G FD I+ NPPY E
Sbjct: 80  FCQQTQYHGFFDHIICNPPYFE 101


>gi|121601757|ref|YP_989216.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis
           KC583]
 gi|120613934|gb|ABM44535.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis
           KC583]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 11/87 (12%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++  +    LDLGTG+G  A+ +A+LK  P       DI   A+++A+ N   NGV +  
Sbjct: 146 VQNENPQNALDLGTGSGVLAIAIAMLKPIPVLAS---DIDPIAIQVAQHNIKLNGVEKYV 202

Query: 151 DTLQSDWFSSVE------GLFDVIVSN 171
             + +  F+  +        FD+IV+N
Sbjct: 203 TAVTASGFNYDDKETVPCAPFDLIVAN 229


>gi|329732227|gb|EGG68577.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 243

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R + +D +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIKDGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           ++  +         G FD IV 
Sbjct: 72  QYSDIYQ--LPETMGHFDAIVG 91


>gi|300724436|ref|YP_003713756.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061]
 gi|297630973|emb|CBJ91653.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061]
          Length = 337

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+  G+G +   L K++P       D++  A+  +K+    N +     T  S+ +S+
Sbjct: 200 LLDIACGSGVLATVLGKKNPDLALTLSDVNAAAITSSKATLKANKLEGSVVT--SNVYSA 257

Query: 161 VEGLFDVIVSNPPY 174
           +E  F+ IVSNPP+
Sbjct: 258 IEEKFNWIVSNPPF 271


>gi|290890803|ref|ZP_06553870.1| hypothetical protein AWRIB429_1260 [Oenococcus oeni AWRIB429]
 gi|290479575|gb|EFD88232.1| hypothetical protein AWRIB429_1260 [Oenococcus oeni AWRIB429]
          Length = 186

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP TE + ++  +   P   K  +V  LDL  G+G++ +  +    + K   VD +  A+
Sbjct: 22  RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180
           E+ ++N +     E F+ +++    +++        FD+++ +PPY +  IV
Sbjct: 78  EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129


>gi|290894242|ref|ZP_06557210.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290556181|gb|EFD89727.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|217963961|ref|YP_002349639.1| methyltransferase [Listeria monocytogenes HCC23]
 gi|217333231|gb|ACK39025.1| methyltransferase [Listeria monocytogenes HCC23]
 gi|307571469|emb|CAR84648.1| RNA methylase domain protein [Listeria monocytogenes L99]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|254852790|ref|ZP_05242138.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300763803|ref|ZP_07073800.1| methyltransferase [Listeria monocytogenes FSL N1-017]
 gi|258606117|gb|EEW18725.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300515539|gb|EFK42589.1| methyltransferase [Listeria monocytogenes FSL N1-017]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|323450036|gb|EGB05920.1| hypothetical protein AURANDRAFT_66085 [Aureococcus anophagefferens]
          Length = 1652

 Score = 38.5 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RIL+LG GTGAV L +    P  +    D+  +AL + ++NA  NGV++R         D
Sbjct: 313 RILELGAGTGAVGLWIALRYPTARVTLTDLP-EALPLIRANAALNGVADRVRVAPLAFGD 371

Query: 157 WFSSVEGLFDVIVSN 171
              S +  FDV+V +
Sbjct: 372 PVPSEDDPFDVVVGS 386


>gi|315127803|ref|YP_004069806.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315016317|gb|ADT69655.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 293

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K   
Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N
Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN 229


>gi|313623187|gb|EFR93445.1| protein YpsC [Listeria innocua FSL J1-023]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|291543369|emb|CBL16478.1| Predicted O-methyltransferase [Ruminococcus sp. 18P13]
          Length = 240

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+ L  +  R + RDV    DLGTG G + L + +  P  +  G+DI  +A+ + +   
Sbjct: 23  TDAFLLAAFSRYQARDVA--CDLGTGCGIIPLVMERHMPPRQIYGLDIQPEAIRLLEQTV 80

Query: 142 VTN---GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             N    ++     L++ W  +      ++  NPPY
Sbjct: 81  AENRLTNLTPVLGDLRTLWADAPLEQCTLVTCNPPY 116


>gi|237837693|ref|XP_002368144.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
 gi|211965808|gb|EEB01004.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
 gi|221488591|gb|EEE26805.1| conserved hypothetical protein [Toxoplasma gondii GT1]
 gi|221509090|gb|EEE34659.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 383

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           +++LD+G G   V   L      +  VG DIS ++LE+A+ N   NG+      R     
Sbjct: 128 IKVLDIGVGANCVYPLLGCTEYGWTFVGSDISERSLELARENVNLNGLEPCVHLRHQQDP 187

Query: 155 SDWFSSV---EGLFDVIVSNPPYIESV 178
           + +FS V     LF + + NPP+ ES 
Sbjct: 188 AKFFSGVVENGELFALSMCNPPFHEST 214


>gi|57242392|ref|ZP_00370330.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57016677|gb|EAL53460.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 373

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 26/114 (22%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTG------AVCLALLKESPFFKGVGVDISC 131
            + LV++        I+ +D V +LD   G+G      A+  +   +  F K +G DI  
Sbjct: 21  ADFLVNAVYTMLKMHIDSKDYV-LLDSSCGSGNFLRTEAIIKSGFAKDSFSKIIGTDIDK 79

Query: 132 KALEIAK-----------SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            AL IAK            NA+ N   E F   Q+D          +IV NPPY
Sbjct: 80  MALHIAKRTLDSRVILLHKNALHNVTREHFSITQTDKL--------IIVGNPPY 125


>gi|326777711|ref|ZP_08236976.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1]
 gi|326658044|gb|EGE42890.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1]
          Length = 510

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+GTG+G   L   + +   +    D++ +ALE  +     +G +   D  +
Sbjct: 158 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 214

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP+   VI     L  R        DGG+ G    R +    
Sbjct: 215 GSLFEPVGSDTFDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRALVQRS 263

Query: 214 SRHLNKDGLCS 224
             HLN+ G   
Sbjct: 264 GAHLNEGGYAQ 274


>gi|270004358|gb|EFA00806.1| hypothetical protein TcasGA2_TC003693 [Tribolium castaneum]
          Length = 734

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  A   +    + + +DI  K +E+A++NA   GV+++ D +  D+F    GL
Sbjct: 584 GAGGNAIQFAFTCK----RVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGL 639

Query: 165 F-DVIVSNPPY 174
             DV+  +PP+
Sbjct: 640 MADVVFFSPPW 650


>gi|253689448|ref|YP_003018638.1| methyltransferase small [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|262828548|sp|C6DC08|TRMN6_PECCP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|251756026|gb|ACT14102.1| methyltransferase small [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 248

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 4/87 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
           V RILD+G+G+G + L L + S     +  V++   A + AK N   +  ++R       
Sbjct: 48  VTRILDIGSGSGLLALMLAQRSDTHVRIDAVELDSAASQQAKENISASPWADRIAVYAED 107

Query: 156 --DWFSSVEGLFDVIVSNPPYIESVIV 180
             D+  +    + +I+SNPPY    I 
Sbjct: 108 IIDFADTRSADYSLIISNPPYFPPGIA 134


>gi|238062048|ref|ZP_04606757.1| SAM-dependent methyltransferase [Micromonospora sp. ATCC 39149]
 gi|237883859|gb|EEP72687.1| SAM-dependent methyltransferase [Micromonospora sp. ATCC 39149]
          Length = 494

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +E     R+LDLG G GA+  AL+ +  + + VG D+S +AL +A      + + ER
Sbjct: 289 LEASGATRVLDLGCGPGALLSALVGDRRYTEIVGTDVSTQALTLAARRLRLDRLPER 345


>gi|218297324|ref|ZP_03497949.1| methyltransferase small [Thermus aquaticus Y51MC23]
 gi|218242361|gb|EED08904.1| methyltransferase small [Thermus aquaticus Y51MC23]
          Length = 251

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 15/127 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL +G+G   +  L  S F   V  V+I+  A ++   N + NG  +R        +  
Sbjct: 23  LDLCSGSG---IQALHCSSFAASVDAVEINPLARQVLWCNVLLNGRHDRIQVWGGSLYDE 79

Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +     +D++V+NPP +             + D      GGIDG +  R I  G+  HL+
Sbjct: 80  LPENRQYDLVVANPPLVPFP---------EELDYPFVGHGGIDGFAVTRKIIQGLPEHLS 130

Query: 219 KDGLCSV 225
           + G   +
Sbjct: 131 ETGRAQI 137


>gi|116873322|ref|YP_850103.1| hypothetical protein lwe1906 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742200|emb|CAK21324.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|301054412|ref|YP_003792623.1| methyltransferase [Bacillus anthracis CI]
 gi|300376581|gb|ADK05485.1| methyltransferase [Bacillus cereus biovar anthracis str. CI]
          Length = 261

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|268322271|emb|CBH32793.1| putative O-methyltransferase [Streptomyces sp. C23201NS3]
          Length = 339

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D+  ++D+  G GA+  A+LK +P  +GV  D   + +  A+ N   +GV++R + +  D
Sbjct: 172 DIGTLVDVAGGRGALLSAVLKANPKTRGVLYD-QPEVVSEARQNFARSGVADRVEIIGGD 230

Query: 157 WFSSVEGLFDV-IVSN 171
           +FSSV    D  ++SN
Sbjct: 231 FFSSVPPAGDAYLLSN 246


>gi|220673234|emb|CAX12680.1| novel protein similar to vertebrate trimethylguanosine synthase
           homolog (S. cerevisiae) (TGS1) [Danio rerio]
          Length = 180

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 14/151 (9%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  AL  +    + +G+DI    L +A+ NA   GV +R D LQ D+      L
Sbjct: 33  GVGGNAIQFALTGK----RVIGIDIDPVRLALAQHNAAVYGVEQRIDFLQGDFLQLAPHL 88

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV----SRHLNK 219
             D++  +PP+      + L  +V +    ++ D G +     + I+D +     R+ + 
Sbjct: 89  RGDMVFLSPPWGGP---EYLTADVFNIQTMMTPD-GFEIFRLSKMISDNIVYFLPRNADM 144

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           + + S+  G   KV+V + F + KL  + A+
Sbjct: 145 EQIASLA-GPGGKVEVEQNFLNNKLKTITAY 174


>gi|189235563|ref|XP_969535.2| PREDICTED: similar to prip interacting protein, pimt [Tribolium
           castaneum]
          Length = 797

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  A   +    + + +DI  K +E+A++NA   GV+++ D +  D+F    GL
Sbjct: 647 GAGGNAIQFAFTCK----RVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGL 702

Query: 165 F-DVIVSNPPY 174
             DV+  +PP+
Sbjct: 703 MADVVFFSPPW 713


>gi|196032007|ref|ZP_03099421.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
 gi|218904009|ref|YP_002451843.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820]
 gi|228915486|ref|ZP_04079075.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228934157|ref|ZP_04096996.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228946498|ref|ZP_04108814.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195994758|gb|EDX58712.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus W]
 gi|218539882|gb|ACK92280.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus AH820]
 gi|228813176|gb|EEM59481.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228825325|gb|EEM71119.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228844133|gb|EEM89193.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 261

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|163788804|ref|ZP_02183249.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales
           bacterium ALC-1]
 gi|159876041|gb|EDP70100.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales
           bacterium ALC-1]
          Length = 484

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)

Query: 62  NVRLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           N  +++ S  F+  P+  E L    + ++L   E  D   +LDL  GTG +   +  ++ 
Sbjct: 300 NFEISMKS-FFQTNPKCAEKLYSKVVDYALEIKEAIDNTVVLDLFCGTGTIGQIIASKAN 358

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS 147
             K VGVDI   A+E AK NA  N + 
Sbjct: 359 NTKIVGVDIVASAIEDAKENAKRNNIE 385


>gi|49477893|ref|YP_036968.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|228927937|ref|ZP_04090982.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229122432|ref|ZP_04251645.1| Methyltransferase type 11 [Bacillus cereus 95/8201]
 gi|49329449|gb|AAT60095.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|228660993|gb|EEL16620.1| Methyltransferase type 11 [Bacillus cereus 95/8201]
 gi|228831627|gb|EEM77219.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 261

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKKFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|332361795|gb|EGJ39599.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1056]
          Length = 182

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD   G+G + +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             D  + L   I GL 
Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETDKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|317139487|ref|XP_001817543.2| UMTA methyltransferase family protein [Aspergillus oryzae RIB40]
          Length = 321

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K DV R+LDLGTGTG   +    E P  + +G D+S       +   V    S   D  +
Sbjct: 85  KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 139

Query: 155 SDWFSS 160
            DW  +
Sbjct: 140 CDWLYT 145


>gi|268326444|emb|CBH40032.1| conserved hypothetical protein, SAM-dependent methyltransferase
           type 11 family [uncultured archaeon]
          Length = 260

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 72  FEPRP--ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F+ RP   TE   ++   F L ++ K+ + +ILD+GTGTG + ++L +     + +G+DI
Sbjct: 19  FDKRPGDRTEEQRNAWKQFFLEKLGKKPL-KILDVGTGTGFLSISLAEIG--HEVMGIDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           S   L  A+  A   G++       ++  S  +  FD++VSN
Sbjct: 76  SEGMLSQARKKAEKRGLNFDLRIEDAESLSLEDETFDIVVSN 117


>gi|224539919|ref|ZP_03680458.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518473|gb|EEF87578.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 235

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E     +ILD+GTGTG + + L +     +   ++I   A   AK N   +   +R   +
Sbjct: 34  EAESSQKILDIGTGTGLIAIMLAQRYSLSQITAIEIDEAAAAQAKMNVARSPWIKRIQVI 93

Query: 154 QSDW-FSSVEGLFDVIVSNPPY 174
            +D+     E  +++IVSNPPY
Sbjct: 94  CNDFSLFQTESKYNLIVSNPPY 115


>gi|168215155|ref|ZP_02640780.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|170713428|gb|EDT25610.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
          Length = 256

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N + ++       L+    +     FDV+  NPPY
Sbjct: 98  KINNIEDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY 134


>gi|16801066|ref|NP_471334.1| hypothetical protein lin2000 [Listeria innocua Clip11262]
 gi|16414501|emb|CAC97230.1| lin2000 [Listeria innocua Clip11262]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|46908119|ref|YP_014508.1| hypothetical protein LMOf2365_1916 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47094193|ref|ZP_00231909.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|226224490|ref|YP_002758597.1| hypothetical protein Lm4b_01903 [Listeria monocytogenes Clip81459]
 gi|254826071|ref|ZP_05231072.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254931943|ref|ZP_05265302.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254993929|ref|ZP_05276119.1| hypothetical protein LmonocytoFSL_13825 [Listeria monocytogenes FSL
           J2-064]
 gi|255521246|ref|ZP_05388483.1| hypothetical protein LmonocFSL_08490 [Listeria monocytogenes FSL
           J1-175]
 gi|46881389|gb|AAT04685.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47017438|gb|EAL08255.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|225876952|emb|CAS05661.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|293583495|gb|EFF95527.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293595312|gb|EFG03073.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|328466237|gb|EGF37394.1| putative N6-adenine-specific DNA methylase [Listeria monocytogenes
           1816]
 gi|328473602|gb|EGF44439.1| putative N6-adenine-specific DNA methylase [Listeria monocytogenes
           220]
 gi|332312328|gb|EGJ25423.1| Protein YpsC [Listeria monocytogenes str. Scott A]
          Length = 382

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|327473427|gb|EGF18847.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK408]
          Length = 182

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  L        V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYAGSGSLAIEALSRG-METAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVR-----------DFDPRISLDGGIDGLS 204
            +E   G FD+++ +PPY  E ++ D   LE R           + D  + L   I GL 
Sbjct: 106 VLEMLTGSFDLVLLDPPYAKEQIVEDIEKLEERRLLSQDVLVVCETDKDVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|238921360|ref|YP_002934875.1| ribosomal protein L11 methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|259534519|sp|C5BEW8|PRMA_EDWI9 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|238870929|gb|ACR70640.1| ribosomal protein L11 methyltransferase, putative [Edwardsiella
           ictaluri 93-146]
          Length = 293

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVS R +  L  D  +
Sbjct: 162 VIDFGCGSGILAIAALKLG-AARAIGIDIDPQAIQASRDNAERNGVSGRLELYLPKDQPA 220

Query: 160 SVEGLFDVIVSN 171
            +    DV+V+N
Sbjct: 221 DLSA--DVVVAN 230


>gi|224223734|gb|ACN39749.1| SibZ [Streptosporangium sibiricum]
          Length = 336

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 35/66 (53%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+R +  +LD G G G + +   +      G+G+D S +A+ +A+  A  +GV++R    
Sbjct: 151 ERRGIRTMLDAGCGAGQLLIDACRRDERLTGIGLDNSPEAIAVAEKLAREHGVADRIQFF 210

Query: 154 QSDWFS 159
            +D F 
Sbjct: 211 VADAFE 216


>gi|19115526|ref|NP_594614.1| DUF890 family protein [Schizosaccharomyces pombe 972h-]
 gi|74626664|sp|O42662|MTT16_SCHPO RecName: Full=Putative methyltransferase-like protein C27D7.08c
 gi|4539588|emb|CAA15827.2| DUF890 family protein [Schizosaccharomyces pombe]
          Length = 385

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 8/90 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++D  RI+ L  GTGA C+  L     +    VG +I   + E AKSN + N +  +   
Sbjct: 71  QKDKKRIIGLDIGTGASCIYPLLGCRMYSYDFVGTEIDKFSFETAKSNILQNNMESQIKI 130

Query: 153 L----QSDWFSSVEGL--FDVIVSNPPYIE 176
           +    Q       EG+  F  ++ NPP+ E
Sbjct: 131 VLRSKQDCLLPDTEGMEEFTFVMCNPPFYE 160


>gi|332983461|ref|YP_004464902.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
 gi|332701139|gb|AEE98080.1| methyltransferase GidB [Mahella australiensis 50-1 BON]
          Length = 240

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 35  RFFLTNAIVR---SLKHESIHRILGWRDF---YNVRLTLSSDTFEPRPETELLVDSALAF 88
           R FL N  ++   SL  E+I R + ++D    +N  + L+S T +     +  +DS L +
Sbjct: 5   RAFLNNEALKCGISLDDEAIDRFMAYKDMLIEWNEHINLTSITDDMGIVIKHFIDSLLCY 64

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           S   I  R   RI+D+GTG G   LAL    P  K
Sbjct: 65  STGVI--RPDARIIDIGTGAGFPGLALKIAFPSLK 97


>gi|289449975|ref|YP_003474465.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184522|gb|ADC90947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 458

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           ++D   G G + L L + + F    GV+I   A+E+A+ NA  NG+        + +T+ 
Sbjct: 314 VIDAYCGIGTISLYLARRAKFV--YGVEIVPAAIEMAERNAEVNGIHNASFVCGKAETVI 371

Query: 155 SDWFSSVEGLF-DVIVSNPP 173
             W +  EGL  DV+V +PP
Sbjct: 372 PQWVA--EGLAPDVVVVDPP 389


>gi|261212228|ref|ZP_05926514.1| predicted O-methyltransferase [Vibrio sp. RC341]
 gi|260838836|gb|EEX65487.1| predicted O-methyltransferase [Vibrio sp. RC341]
          Length = 239

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A AF++P         ILD+G+GTG + +   +  P  +   +DI   A +  + N   +
Sbjct: 36  AWAFTIP------PRSILDIGSGTGLLSIMCAQRFPEAEITALDIELSAFQATEHNRKNS 89

Query: 145 GVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIES 177
             ++R      D   W    +  F  I+ NPPY  S
Sbjct: 90  PWADRITCHHHDILHW--QPDRRFAAIICNPPYFNS 123


>gi|255028345|ref|ZP_05300296.1| hypothetical protein LmonL_02296 [Listeria monocytogenes LO28]
          Length = 383

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 256 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 308


>gi|229077255|ref|ZP_04209949.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
 gi|228706086|gb|EEL58381.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
          Length = 175

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 10/79 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +ILD+GTG+G++ + L K  P     GVD      E +KS    NA   GVS+R D L++
Sbjct: 8   KILDIGTGSGSLIIKLAKTFPKSFLTGVDYWGGNWEYSKSQCQQNAKIEGVSDRIDFLKA 67

Query: 156 DW----FSSVEGLFDVIVS 170
                 F+  E  FD IVS
Sbjct: 68  SAAELPFTDNE--FDTIVS 84


>gi|146305786|ref|YP_001186251.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
 gi|145573987|gb|ABP83519.1| 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835
           methyltransferase [Pseudomonas mendocina ymp]
          Length = 377

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +  D  R+ DLG G G + +A    SP  +   VD S  A++ A+ N     + E
Sbjct: 226 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAA-ALGE 284

Query: 149 RFDTLQS--DWFSSVEGLFDVIVSNPPYIESVIV 180
           R  T+++         G  D+++ NPP+ +  +V
Sbjct: 285 RPATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV 318


>gi|116491255|ref|YP_810799.1| N6-adenine-specific methylase [Oenococcus oeni PSU-1]
 gi|116091980|gb|ABJ57134.1| N6-adenine-specific methylase [Oenococcus oeni PSU-1]
          Length = 186

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP TE + ++  +   P   K  +V  LDL  G+G++ +  +    + K   VD +  A+
Sbjct: 22  RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180
           E+ ++N +     E F+ +++    +++        FD+++ +PPY +  IV
Sbjct: 78  EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129


>gi|261278877|pdb|3K0B|A Chain A, Crystal Structure Of A Predicted N6-Adenine-Specific Dna
           Methylase From Listeria Monocytogenes Str. 4b F2365
          Length = 393

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY E
Sbjct: 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDEYGVVVANPPYGE 319


>gi|148271616|ref|YP_001221177.1| putative SAM-dependent methyltransferase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147829546|emb|CAN00459.1| putative SAM-dependant methyltransferase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 249

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           +LDLG G G+  L  L+  P    VGVD S    +  +  A   G+++R + +++D   W
Sbjct: 39  VLDLGCGDGSWLLRALRRDPALIAVGVDHSDAGFDRVREQAEREGLADRLELVRADARSW 98

Query: 158 FSSVEGLFDVIVS 170
            S+    FDV++S
Sbjct: 99  SSNDR--FDVVLS 109


>gi|119473197|ref|ZP_01614894.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Alteromonadales bacterium TW-7]
 gi|119444561|gb|EAW25876.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Alteromonadales bacterium TW-7]
          Length = 293

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K   
Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N
Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN 229


>gi|253733802|ref|ZP_04867967.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253728105|gb|EES96834.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 245

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R + +D +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 14  LDRAQIKDGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 73

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           ++  +         G FD IV 
Sbjct: 74  QYSDIYQ--LPETMGHFDAIVG 93


>gi|167625805|ref|YP_001676099.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|189037703|sp|B0TJ37|PRMA_SHEHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|167355827|gb|ABZ78440.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 293

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFS 159
           ++D G G+G + +A LK     +  G+DI  +A+E +K+NA  NGV ++ +  L  D   
Sbjct: 162 VIDFGCGSGILAVAALKLG-AERVTGIDIDYQAIEASKANAERNGVQDKLELYLPED--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L D++V+N
Sbjct: 219 PADLLADILVAN 230


>gi|160914580|ref|ZP_02076795.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
 gi|158433738|gb|EDP12027.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
          Length = 198

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 13/80 (16%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG------VSERFDTL 153
           R+LDLG G G V + L K  P      +D++ +A+++AK N   N       VS  ++ L
Sbjct: 61  RVLDLGCGYGPVGVVLKKIYPTKAFEMIDVNPRAVQLAKENICRNQLEADVHVSNIYEDL 120

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + +S        I++NPP
Sbjct: 121 HQESYSD-------IITNPP 133


>gi|14521102|ref|NP_126577.1| menaquinone biosynthesis methlytransferase related [Pyrococcus
           abyssi GE5]
 gi|5458319|emb|CAB49808.1| SAM-dependent methyltransferase [Pyrococcus abyssi GE5]
          Length = 248

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R  +R+V RILDL  GTG   L L K    ++ +G+D+  + L++A+  +   G+   F
Sbjct: 36  REAEREVKRILDLACGTGTPTLELAKRG--YEVIGLDLHEEMLQVARRKSEKEGIKVEF 92


>gi|332290180|ref|YP_004421032.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330433076|gb|AEC18135.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 334

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +   L   SP       DI   A+ +A +         +   + SD FS
Sbjct: 196 KVLDVGCGAGVIGAYLKFHSPQIDLTMSDI--HAMALASATQTLQQNQLQGSVIASDVFS 253

Query: 160 SVEGLFDVIVSNPPY 174
            +   FD+I+SNPP+
Sbjct: 254 HINDKFDLIISNPPF 268


>gi|322372660|ref|ZP_08047196.1| type I restriction-modification system, M subunit [Streptococcus
           sp. C150]
 gi|321277702|gb|EFX54771.1| type I restriction-modification system, M subunit [Streptococcus
           sp. C150]
          Length = 534

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    I D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-IYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|225628668|ref|ZP_03786702.1| methyltransferase [Brucella ceti str. Cudo]
 gi|237816713|ref|ZP_04595705.1| methyltransferase [Brucella abortus str. 2308 A]
 gi|260544387|ref|ZP_05820208.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260759651|ref|ZP_05871999.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|261216839|ref|ZP_05931120.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261319067|ref|ZP_05958264.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319706|ref|ZP_05958903.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261753205|ref|ZP_05996914.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|261756374|ref|ZP_06000083.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|294853221|ref|ZP_06793893.1| RsmD family RNA methyltransferase [Brucella sp. NVSL 07-0026]
 gi|297249904|ref|ZP_06933605.1| RsmD family RNA methyltransferase [Brucella abortus bv. 5 str.
           B3196]
 gi|225616514|gb|EEH13562.1| methyltransferase [Brucella ceti str. Cudo]
 gi|237787526|gb|EEP61742.1| methyltransferase [Brucella abortus str. 2308 A]
 gi|260097658|gb|EEW81532.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260669969|gb|EEX56909.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260921928|gb|EEX88496.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261292396|gb|EEX95892.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261298290|gb|EEY01787.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261736358|gb|EEY24354.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261742958|gb|EEY30884.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|294818876|gb|EFG35876.1| RsmD family RNA methyltransferase [Brucella sp. NVSL 07-0026]
 gi|297173773|gb|EFH33137.1| RsmD family RNA methyltransferase [Brucella abortus bv. 5 str.
           B3196]
          Length = 196

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 6   REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 61

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S +   I + N    G+       R D  Q     
Sbjct: 62  FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 120

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 121 TME-PFDLVFADPPY 134


>gi|261856467|ref|YP_003263750.1| biotin biosynthesis protein BioC [Halothiobacillus neapolitanus c2]
 gi|261836936|gb|ACX96703.1| biotin biosynthesis protein BioC [Halothiobacillus neapolitanus c2]
          Length = 266

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F L +IE R   RILDLG GTG +  A+ K  P  + V +D++ + L +      T  + 
Sbjct: 36  FELLKIEPR---RILDLGAGTGQMTRAMQKRYPSAQVVALDLAEQMLAVIPK---TGRIF 89

Query: 148 ERFDTLQSDW--FSSVEGLFDVIVSN 171
           +R   + +D        G FDV++SN
Sbjct: 90  KRRRVVCADMHQLPFKAGSFDVVISN 115


>gi|300744004|ref|ZP_07073024.1| putative methyltransferase small domain protein [Rothia
           dentocariosa M567]
 gi|300380365|gb|EFJ76928.1| putative methyltransferase small domain protein [Rothia
           dentocariosa M567]
          Length = 209

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V +T ++  F P       +D   A  L ++ +     +LD+G G G + L+L   +P 
Sbjct: 28  QVSVTTANGIFSPSG-----IDKGTAVLLEQVPEPHGKYMLDIGCGWGPITLSLAMLAPQ 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +  G+D++ ++L + + NA   G+     +   +   ++   FD I SNPP
Sbjct: 83  SEVYGIDVNSRSLSLTEQNARALGMHNVSVSTPDEIDPTLR--FDTIWSNPP 132


>gi|261215708|ref|ZP_05929989.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|260917315|gb|EEX84176.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
          Length = 196

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 6   REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 61

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S +   I + N    G+       R D  Q     
Sbjct: 62  FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 120

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 121 TME-PFDLVFADPPY 134


>gi|257467012|ref|ZP_05631323.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 309

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N VS E++  L  +   
Sbjct: 175 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 233

Query: 160 SVEGL-FDVIVSN 171
            +E   +DV+V+N
Sbjct: 234 KIEKQSYDVVVAN 246


>gi|257451704|ref|ZP_05617003.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 309

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS 159
           +LD+GTG+G + +   K    F   GVDI   A+E+A  N   N VS E++  L  +   
Sbjct: 175 VLDVGTGSGILMIVAEKLGAGFV-CGVDIDELAVEVANENLELNKVSKEKYKVLHGNLIE 233

Query: 160 SVEGL-FDVIVSN 171
            +E   +DV+V+N
Sbjct: 234 KIEKQSYDVVVAN 246


>gi|254671001|emb|CBA07760.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha153]
          Length = 330

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 257

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 258 ----QGQFDVVVAN 267


>gi|241896131|ref|ZP_04783427.1| site-specific DNA-methyltransferase [Weissella paramesenteroides
           ATCC 33313]
 gi|241870645|gb|EER74396.1| site-specific DNA-methyltransferase [Weissella paramesenteroides
           ATCC 33313]
          Length = 388

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIE 176
            G DI    +EIAK+NA   GV E     Q   +DW  S + +  V+V+NPPY E
Sbjct: 267 TGYDIDENMIEIAKANAEAAGVGEDITFKQLAAADW--STDKINGVLVANPPYGE 319


>gi|303290222|ref|XP_003064398.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453996|gb|EEH51303.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 384

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 8/58 (13%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNPPYI 175
           GVD S  AL++A  NA  NGV++R   +++D F  ++        G +D+IV +PP +
Sbjct: 233 GVDSSRPALDVAAKNASLNGVTDRIRWVKNDAFKHLDACLENGEAGTYDLIVLDPPKL 290


>gi|20094146|ref|NP_613993.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19]
 gi|19887153|gb|AAM01923.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19]
          Length = 199

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T+LL ++        ++   V  +LDLG G G + +   KE      V  D++ +A+ 
Sbjct: 44  PGTQLLAEN--------MDLEGVHSVLDLGCGYGVLGIVAAKELGEGHVVMTDVNRRAIW 95

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           +A  N   N V +  +  +   +  VE   FD IVSNPP  E +
Sbjct: 96  LANENRRLNDVEDITEVREGSLYDPVEDEEFDRIVSNPPIREGL 139


>gi|169762756|ref|XP_001727278.1| UMTA methyltransferase family protein [Aspergillus oryzae RIB40]
 gi|83770306|dbj|BAE60439.1| unnamed protein product [Aspergillus oryzae]
          Length = 342

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 18/161 (11%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V   S    + D  S++D     F  ++ VR  ++E+  R   +R   N +  + +D  E
Sbjct: 11  VVDTSDEDSLCDAQSIIDSN---FSLHSTVRDYEYENGRRYHAYR---NGQYPMPNDEEE 64

Query: 74  P------RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                      +LL+  AL +  P  + +   RILD+GTGTG   + + ++ P  + VG 
Sbjct: 65  QDRLAFMHHLFKLLLGGAL-YRAPIEQAQTPQRILDVGTGTGIWAIDIAEDFPGAEIVGT 123

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           D+S      A  N          D  +S+W  S    FD I
Sbjct: 124 DLSPIQPNWAPPNCTF-----LVDDAESEWAFSPSEAFDYI 159


>gi|16331775|ref|NP_442503.1| hypothetical protein sll0487 [Synechocystis sp. PCC 6803]
 gi|1001736|dbj|BAA10573.1| sll0487 [Synechocystis sp. PCC 6803]
          Length = 402

 Score = 38.5 bits (88), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F L R      VRILD G GTG     L+  +P  +   VDIS  AL +A++    
Sbjct: 41  AAHNFCLGRRPANQKVRILDAGCGTGVGTEYLVHLNPEAEVHAVDISEGALAVAQTRLQK 100

Query: 144 NGV---SERFDTLQSDWFSSVEGLFDVIVS 170
           +GV      F  L  +  + + G FD I S
Sbjct: 101 SGVVCDRVHFHHLSLENLAHLPGQFDYINS 130


>gi|306843587|ref|ZP_07476188.1| methyltransferase small [Brucella sp. BO1]
 gi|306276278|gb|EFM57978.1| methyltransferase small [Brucella sp. BO1]
          Length = 340

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A  N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAAHGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|251779390|ref|ZP_04822310.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083705|gb|EES49595.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 250

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DL TGTG +   L  +    +  G++I  + + +A+ +   N + ++   ++ D   
Sbjct: 52  RVIDLCTGTGIIPFLLYGKYSPREIYGLEIQEEMVNMAEKSVKLNALEDKITFMKED-LK 110

Query: 160 SVEGL-----FDVIVSNPPY 174
           ++E L     FDV+  NPPY
Sbjct: 111 NIEYLKKMDKFDVVTVNPPY 130


>gi|149911097|ref|ZP_01899724.1| Putative ribosomal RNA small subunit methyltransferase D
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           [Moritella sp. PE36]
 gi|149805847|gb|EDM65836.1| Putative ribosomal RNA small subunit methyltransferase D
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           [Moritella sp. PE36]
          Length = 375

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  + K +   I+DLG G G + +   + +P  K   VD S  A+  AK NA  N  S
Sbjct: 221 FFMQYLPKGEYQHIIDLGCGNGVIGITAARLNPQAKITFVDESFMAIASAKENAAANIAS 280

Query: 148 ERFDT---LQSDWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEV 187
              D    + +  +       D+++ NPP+  E  I D +  ++
Sbjct: 281 HEQDVEFLVNNCLYDYEPHSVDLVLCNPPFHQEKAITDHIAWQM 324


>gi|325135641|gb|EGC58258.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M0579]
          Length = 330

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 257

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 258 ----QGQFDVVVAN 267


>gi|255326353|ref|ZP_05367437.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
 gi|255296570|gb|EET75903.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
          Length = 207

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 16/99 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L         R+LD+G G G + L L   +P  +   VD++ +++ + + NA
Sbjct: 43  IDKGTAILLQEAPDPQGERMLDIGCGWGPITLTLAMLAPDAQVHAVDVNSRSISLTERNA 102

Query: 142 -------VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                  VT G  E  D          E  FD I SNPP
Sbjct: 103 AALGLPNVTVGTPESVDP---------ELRFDTIWSNPP 132


>gi|255656537|ref|ZP_05401946.1| hypothetical protein CdifQCD-2_12754 [Clostridium difficile
           QCD-23m63]
 gi|296450012|ref|ZP_06891776.1| RsmD family RNA methyltransferase [Clostridium difficile NAP08]
 gi|296878393|ref|ZP_06902401.1| RsmD family RNA methyltransferase [Clostridium difficile NAP07]
 gi|296261282|gb|EFH08113.1| RsmD family RNA methyltransferase [Clostridium difficile NAP08]
 gi|296430691|gb|EFH16530.1| RsmD family RNA methyltransferase [Clostridium difficile NAP07]
          Length = 184

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 13/93 (13%)

Query: 100 RILDLGTGTGAV---CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +LDL  GTG++   CL+   ++  F    VDIS ++++I KSN     V      L  D
Sbjct: 44  EVLDLFAGTGSLGIECLSRGAKACTF----VDISKESIDIVKSNIKKARVESESIILNLD 99

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCL 183
           + ++++ L      FD+I  +PPY +++ ++ +
Sbjct: 100 FKTAIDKLKLQNSKFDIIFMDPPYYKNMFIEAI 132


>gi|224539551|ref|ZP_03680090.1| hypothetical protein BACCELL_04456 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518832|gb|EEF87937.1| hypothetical protein BACCELL_04456 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 476

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 19/116 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEK-------RDVVRILDLGTGTGAVCLALLKESPFFKG 124
           F+  P++    +S  A++L +I +       +++V   DL TGTG +   + K++   + 
Sbjct: 296 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGKELV--YDLYTGTGTIANFVSKQAR--QV 351

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           +G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 352 IGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 406


>gi|298242107|ref|ZP_06965914.1| Methyltransferase type 12 [Ktedonobacter racemifer DSM 44963]
 gi|297555161|gb|EFH89025.1| Methyltransferase type 12 [Ktedonobacter racemifer DSM 44963]
          Length = 475

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           D  L  +   I +    R+LDLG G G +   LL E  F   +G+D+S ++L IA+
Sbjct: 276 DQRLQAAFETIRQSGAKRVLDLGCGEGKLLRMLLTEKSFEHILGLDVSYRSLAIAR 331


>gi|87125410|ref|ZP_01081256.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917]
 gi|86167179|gb|EAQ68440.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917]
          Length = 407

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LD G GTG     L   +P    + VDIS  ALE+A+     +G  ER   L+ +  
Sbjct: 63  LRLLDAGCGTGVSTDYLCHLNPGADVLAVDISAGALEVARERLRRSGGGERVVALRQEQR 122

Query: 159 S----SVEGLFDVIVS 170
           S    + EG FD I S
Sbjct: 123 SLLDLAGEGPFDYINS 138


>gi|308487672|ref|XP_003106031.1| hypothetical protein CRE_20319 [Caenorhabditis remanei]
 gi|308254605|gb|EFO98557.1| hypothetical protein CRE_20319 [Caenorhabditis remanei]
          Length = 224

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             +G+D+   AL++   N     V ER + LQ+D
Sbjct: 47  DGVKLVDVGCGCGMLMTTAATLYEPESVLGIDLDEDALKVCARNIEFADVQERCEVLQAD 106

Query: 157 WFSS----VEGLFDVIVSNPPY 174
              S      G FDV + NPP+
Sbjct: 107 VLDSETDLPRGTFDVAIINPPF 128


>gi|296168231|ref|ZP_06850204.1| thiopurine S-methyltransferase family protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295896803|gb|EFG76434.1| thiopurine S-methyltransferase family protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 246

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P+P  + LV    A+   R E      +LD GTG G   +    +   +   G+D S  A
Sbjct: 30  PQPAVQQLV----AYGGIRGE------VLDPGTGPGYHAIHFAAQG--YSATGIDDSPSA 77

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +E AK NA   GV   F    +      +G FD +V +  Y
Sbjct: 78  IERAKRNAERAGVEVDFQVADATRLEGFDGRFDTVVDSAFY 118


>gi|291566902|dbj|BAI89174.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 442

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           ILD G G+G   LAL   +P  K VG+DIS K++E +++    +G+ +  F  +  +   
Sbjct: 62  ILDAGCGSGYKALALALANPGAKIVGIDISEKSVEASRNRLKYHGIENAEFHAMYIEELP 121

Query: 160 SVEGLFDVI 168
           S+   FD I
Sbjct: 122 SLGWEFDYI 130


>gi|302508441|ref|XP_003016181.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Arthroderma benhamiae CBS 112371]
 gi|291179750|gb|EFE35536.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Arthroderma benhamiae CBS 112371]
          Length = 319

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA 141
           ILDLGTG G++ L LL+E   F G  VGVD S K++E+A+  A
Sbjct: 119 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARQLA 160


>gi|229159971|ref|ZP_04287976.1| Methyltransferase type 11 [Bacillus cereus R309803]
 gi|228623494|gb|EEK80315.1| Methyltransferase type 11 [Bacillus cereus R309803]
          Length = 212

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 10/79 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +ILD+GTG+G++ + L K  P     G+D      E +KS    NA   GVS R D L++
Sbjct: 45  KILDIGTGSGSLIIKLAKTFPKSFLTGIDYWGGNWEYSKSKCQQNAEIEGVSNRIDFLKA 104

Query: 156 DW----FSSVEGLFDVIVS 170
                 F+  E  FD+IVS
Sbjct: 105 SAAELPFTDNE--FDIIVS 121


>gi|115524232|ref|YP_781143.1| precorrin-6y C5,15-methyltransferase, subunit CbiE
           [Rhodopseudomonas palustris BisA53]
 gi|115518179|gb|ABJ06163.1| precorrin-6Y C5,15-methyltransferase (decarboxylating)
           [Rhodopseudomonas palustris BisA53]
          Length = 407

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 32/60 (53%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +L  +  R    + D+G G+GA+ +  L   P  + +G++     LE A+SNA T GV
Sbjct: 246 AVTLSSLAPRGGELLWDIGAGSGAIGIEWLLADPHNRAIGIEARADRLETARSNASTLGV 305


>gi|85101730|ref|XP_961205.1| hypothetical protein NCU03816 [Neurospora crassa OR74A]
 gi|16944575|emb|CAC18256.2| conserved hypothetical protein [Neurospora crassa]
 gi|28922746|gb|EAA31969.1| predicted protein [Neurospora crassa OR74A]
          Length = 406

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 84/211 (39%), Gaps = 60/211 (28%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKG--------VGVDISCKALEIAKSNAVTNG 145
           ++   + I+DL TGTG  C+ LL  S   +         VGVDIS KA+ +++ N   N 
Sbjct: 122 DQHQPLNIIDLCTGTG--CIPLLLYSQLSRSLPLQSLNIVGVDISQKAINLSRQNLHHNL 179

Query: 146 VSERFDTLQS----------------DWFSSVE--------------------------- 162
            + RF    S                D FS                              
Sbjct: 180 HAHRFPRPSSPRDKSHPQRLLHFHKADIFSPTSLDPILSTPSSSSTSSSSSSSSSSSTGT 239

Query: 163 GLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKD 220
           G +D++ SNPPYI  S         VR+++P+++L   ++ +  H +   D      N+ 
Sbjct: 240 GEWDLLTSNPPYISPSGFALSTSRSVRNWEPKLALVPPVERVDLHQKHFYDHWYYPDNEI 299

Query: 221 GLCSVE-----IGYNQKVDVVRIFESRKLFL 246
            L +VE     + Y + +++ R +  +++ +
Sbjct: 300 LLQTVEYQEEDVFYARLLEIARTYRPKRVLM 330


>gi|325127520|gb|EGC50446.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           N1568]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|317139489|ref|XP_003189172.1| UMTA methyltransferase family protein [Aspergillus oryzae RIB40]
          Length = 258

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K DV R+LDLGTGTG   +    E P  + +G D+S       +   V    S   D  +
Sbjct: 22  KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 76

Query: 155 SDWFSS 160
            DW  +
Sbjct: 77  CDWLYT 82


>gi|307704233|ref|ZP_07641155.1| RNA methylase family UPF0020 family protein [Streptococcus mitis
           SK597]
 gi|307622213|gb|EFO01228.1| RNA methylase family UPF0020 family protein [Streptococcus mitis
           SK597]
          Length = 385

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 13/59 (22%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK+NA   GV+E       R   L+SD    + G   VI+SNPPY E
Sbjct: 260 MGCDIDARMVEIAKANAQAAGVAEDITFKQMRVQDLRSD---KING---VIISNPPYGE 312


>gi|324992013|gb|EGC23935.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus sanguinis SK405]
          Length = 533

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E +    I D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDQQGFTIYDATMGSGSLLLNAKKFSHQPQTVQYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|254520681|ref|ZP_05132737.1| type I restriction-modification system [Clostridium sp. 7_2_43FAA]
 gi|226914430|gb|EEH99631.1| type I restriction-modification system [Clostridium sp. 7_2_43FAA]
          Length = 518

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           ++K+D+  + D   G+G++ L + KE+      G +       +A+ N + +GVS     
Sbjct: 223 MDKKDLKNVYDPTCGSGSLLLRVSKEANVRTFYGQEKVSTTYNLARMNMILHGVSYKDFN 282

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +  DTL++     ++  F+ IV+NPPY
Sbjct: 283 IKNDDTLENPQHKDMK--FEAIVANPPY 308


>gi|212223247|ref|YP_002306483.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           onnurineus NA1]
 gi|212008204|gb|ACJ15586.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           onnurineus NA1]
          Length = 209

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 35/163 (21%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G GA+ +   +   +   V  D++ +A+ IA+ N   N V    +      + 
Sbjct: 73  RVLDLGCGYGAIGIVASRFVEYV--VMTDVNRRAVSIARKNLKINNVRNA-EVRWGSLYE 129

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V G  FD I++NPP                      +  G + L   R I     RHLN
Sbjct: 130 PVRGEKFDTIITNPP----------------------VHAGKEIL---REIVINAPRHLN 164

Query: 219 KDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255
             GL  + I   Q    ++        E R+L   + ++ Y G
Sbjct: 165 DGGLLQLVIKTKQGAKYIKGLMEEHFTEVRELAKGSGYRVYAG 207


>gi|121700134|ref|XP_001268332.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
 gi|119396474|gb|EAW06906.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
          Length = 241

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 29/130 (22%)

Query: 99  VRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +++L+   GTGAV  AL   +PF  K VG+D+S + ++   SNA   G + +      D 
Sbjct: 56  IKVLEYACGTGAVSSAL---APFVDKVVGIDVSEEMIKQYNSNAKETGFAGKMAGYVGDL 112

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSR- 215
           F+                ESV  +  G E +DFD   +S+      L H+      + R 
Sbjct: 113 FA----------------ESVPAEISGPEFQDFDLVAVSM-----ALHHFDKPEFALKRL 151

Query: 216 --HLNKDGLC 223
              L K G+C
Sbjct: 152 GERLKKGGMC 161


>gi|27379183|ref|NP_770712.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
 gi|27352334|dbj|BAC49337.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
          Length = 418

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G+G G + L  L E+      G+ +S + L++A + A   G++     L  D + 
Sbjct: 176 RVLDIGSGWGGLGL-YLAETAGADVTGITLSSEQLQLANARAAEKGLTRSAKFLLQD-YR 233

Query: 160 SVEGLFDVIVS 170
            ++G FD IVS
Sbjct: 234 DIDGPFDRIVS 244


>gi|254226733|ref|ZP_04920309.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620750|gb|EAZ49108.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 340

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                ++ IV+NPP+
Sbjct: 261 DTGHHYNYIVTNPPF 275


>gi|329849998|ref|ZP_08264844.1| methyltransferase domain protein [Asticcacaulis biprosthecum C19]
 gi|328841909|gb|EGF91479.1| methyltransferase domain protein [Asticcacaulis biprosthecum C19]
          Length = 463

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L + L  ++ R+V  ++D+G G G +   L K+  F K  G D+S +ALEIA++
Sbjct: 271 LDWVLATLKAREVKTVVDMGCGEGRLVGMLSKDLAFEKITGCDVSLRALEIARA 324


>gi|325000046|ref|ZP_08121158.1| O-methyltransferase [Pseudonocardia sp. P1]
          Length = 334

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LVD A A  +   +  D   ++DLG GTGA+   +L   P  +G+ +D+   A + A   
Sbjct: 150 LVDEAGAAFVDAYDVPDGSTVVDLGGGTGALLRHVLTARPSCRGMLLDLPDVA-QRAHDE 208

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDV 167
               G++ R D +  D+F +V G  DV
Sbjct: 209 LTAAGLASRCDVMLGDFFEAVPGGADV 235


>gi|256391479|ref|YP_003113043.1| methyltransferase type 12 [Catenulispora acidiphila DSM 44928]
 gi|256357705|gb|ACU71202.1| Methyltransferase type 12 [Catenulispora acidiphila DSM 44928]
          Length = 248

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           + D   G G + L +L  +P  +G GVD+S + LE  ++NA   G+ +R +
Sbjct: 39  VADYACGWGELLLRVLALAPSARGFGVDMSARDLERGRANAAARGLGDRVE 89


>gi|229077311|ref|ZP_04209992.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2]
 gi|228706002|gb|EEL58309.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2]
          Length = 338

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG   V L L   S   KG   GV+I  +  ++   +   NG+ ER   +  D  
Sbjct: 48  LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104

Query: 159 SSVEGL----FDVIVSNPPYIES 177
              E L    +DV+  NPPY ++
Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127


>gi|323697914|ref|ZP_08109826.1| ribosomal L11 methyltransferase [Desulfovibrio sp. ND132]
 gi|323457846|gb|EGB13711.1| ribosomal L11 methyltransferase [Desulfovibrio desulfuricans ND132]
          Length = 287

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 27/129 (20%)

Query: 47  KHESIHRILGWRDFY-NVRLTLSSDTFEP-------RPETELLVDSALAF---------- 88
           + ES +  + W+DF+  V    S   + P          T ++++  +AF          
Sbjct: 72  EQESENWAMAWKDFFVPVNCGESFRIYPPWLNDDEENGTTHIVIEPKMAFGTGHHATTSL 131

Query: 89  ---SLPRIEKRDVV----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
              ++ R+ K   +      LDLGTG+G + + L K      G+G+DI  +A+  A  N 
Sbjct: 132 CLATIGRLAKAGTIAEGKTFLDLGTGSGILGIGLSKLG--LTGIGLDIDPQAVVCAVENV 189

Query: 142 VTNGVSERF 150
             NGV+E  
Sbjct: 190 AANGVTESM 198


>gi|317128302|ref|YP_004094584.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus
           DSM 2522]
 gi|315473250|gb|ADU29853.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus
           DSM 2522]
          Length = 313

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 22/137 (16%)

Query: 56  GWRDFY-------NVRLTLSSDTFEPRPETELLV--DSALAFS----------LPRIEKR 96
            W+ +Y       N+ +T + + +E   E EL++  D  +AF           +  +EK 
Sbjct: 113 AWKKYYKPVKVSENITITPTWEEYEKVHEKELIIELDPGMAFGTGTHPTTVLCIQALEKH 172

Query: 97  DVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +   ++D+GTG+G + +A  K       + +D+   A++ A  N   N V +R D  Q
Sbjct: 173 LKLGDTVVDVGTGSGVLSIAAAKLGAQHI-LALDLDDVAVKAANLNVKLNRVQDRIDVKQ 231

Query: 155 SDWFSSVEGLFDVIVSN 171
           S+    VE    +I++N
Sbjct: 232 SNLLEKVESNPTLIIAN 248


>gi|222149109|ref|YP_002550066.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4]
 gi|254782824|sp|B9JXT0|PRMA_AGRVS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221736094|gb|ACM37057.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4]
          Length = 290

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 16/97 (16%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAK 138
           ++DS +    PR         LDLGTG+G + +A+ K    P       DI   A+ +AK
Sbjct: 142 MIDSVVRARRPR-------NALDLGTGSGVLAIAVRKLVNVPVL---ATDIDPIAVRVAK 191

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
            N   NGV    +   +  F S      G FD+I++N
Sbjct: 192 ENGTRNGVPNGIEWRTAPGFHSTAFGEFGPFDLIIAN 228


>gi|217033265|ref|ZP_03438696.1| hypothetical protein HP9810_9g18 [Helicobacter pylori 98-10]
 gi|216944206|gb|EEC23631.1| hypothetical protein HP9810_9g18 [Helicobacter pylori 98-10]
          Length = 543

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNSYHSKECKGKMDYIVSNPPF 315


>gi|78043572|ref|YP_360269.1| hypothetical protein CHY_1437 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995687|gb|ABB14586.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 390

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 23/133 (17%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESV 178
           +GVDIS +A+  A+ NAV NG  ++   ++++ F  +  L      FD+++ +PP     
Sbjct: 241 IGVDISSEAITRAQENAVLNGFQDKIFFIEANCFDYLRELEKNRANFDIVILDPPAFTKS 300

Query: 179 IVDCLGLEVRDFDP------RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYN 230
             + L   +R +        ++  +GGI        +    S HL +D   +V  E  ++
Sbjct: 301 -KEALPGAIRGYKEINLRALKLLNEGGI-------LVTSSCSYHLTEDLFWNVISEAAFD 352

Query: 231 QKVDVVRIFESRK 243
            K   VRI E+R+
Sbjct: 353 AK-KRVRIIEARR 364


>gi|15640321|ref|NP_229948.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121727069|ref|ZP_01680260.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52]
 gi|153801523|ref|ZP_01956109.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3]
 gi|153822832|ref|ZP_01975499.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|153827379|ref|ZP_01980046.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2]
 gi|229509282|ref|ZP_04398765.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|229512698|ref|ZP_04402166.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21]
 gi|229516226|ref|ZP_04405674.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9]
 gi|229527211|ref|ZP_04416604.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)]
 gi|229606422|ref|YP_002877070.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236]
 gi|254286234|ref|ZP_04961193.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226]
 gi|254851429|ref|ZP_05240779.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10]
 gi|255744094|ref|ZP_05418048.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101]
 gi|258624523|ref|ZP_05719467.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603]
 gi|262161984|ref|ZP_06031001.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|262172603|ref|ZP_06040281.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451]
 gi|38605494|sp|Q9KV64|PRMA_VIBCH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|9654704|gb|AAF93467.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121630580|gb|EAX62970.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52]
 gi|124122928|gb|EAY41671.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3]
 gi|126519650|gb|EAZ76873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|149738709|gb|EDM53051.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2]
 gi|150423649|gb|EDN15591.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226]
 gi|229335219|gb|EEO00703.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)]
 gi|229346652|gb|EEO11622.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9]
 gi|229350208|gb|EEO15160.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21]
 gi|229353597|gb|EEO18534.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|229369077|gb|ACQ59500.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236]
 gi|254847134|gb|EET25548.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10]
 gi|255738359|gb|EET93750.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101]
 gi|258583220|gb|EEW08025.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603]
 gi|261893679|gb|EEY39665.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451]
 gi|262028362|gb|EEY47018.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|327483165|gb|AEA77572.1| Ribosomal protein L11 methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|312880708|ref|ZP_07740508.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260]
 gi|310783999|gb|EFQ24397.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260]
          Length = 218

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 85  ALAFSL-PRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKAL 134
           A AF + PR  +R +        ++ LDLG G G +  AL   SP    + GVD+S   L
Sbjct: 25  ASAFGMGPRFYERALGGLVLAPGMKALDLGCGPGGLSFALGARSPVDTQIHGVDLSVDQL 84

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIVDCLGLEVR 188
           ++A   A     S RF     D     +G FD+++++      PP +    V  +   +R
Sbjct: 85  DLASRRAGRVSCSLRFHRCSMDELPFPDGEFDLVMTSMALHETPPEVRRRTVGEVARVLR 144

Query: 189 D 189
           D
Sbjct: 145 D 145


>gi|294632596|ref|ZP_06711156.1| mucin-2 [Streptomyces sp. e14]
 gi|292835929|gb|EFF94278.1| mucin-2 [Streptomyces sp. e14]
          Length = 337

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           D+G G     + L++  P   G+GVD++ +A ++A+ N    G+ +R   +Q+D    V
Sbjct: 156 DIGCGAATRLIHLVESRPGTTGIGVDVNAEACQLARQNVKRAGLDDRITIVQADMLDVV 214


>gi|229520987|ref|ZP_04410408.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229341872|gb|EEO06873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM
           11079-80]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|238482815|ref|XP_002372646.1| UMTA methyltransferase family protein [Aspergillus flavus NRRL3357]
 gi|220700696|gb|EED57034.1| UMTA methyltransferase family protein [Aspergillus flavus NRRL3357]
          Length = 296

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K DV R+LDLGTGTG   +    E P  + +G D+S       +   V    S   D  +
Sbjct: 60  KNDVQRVLDLGTGTGIWAIDFADEHPSAQVIGTDLSP-----IQPRWVPPTCSFEIDDFE 114

Query: 155 SDWFSS 160
            DW  +
Sbjct: 115 CDWLYT 120


>gi|119961880|ref|YP_947365.1| methyltransferase small subunit [Arthrobacter aurescens TC1]
 gi|119948739|gb|ABM07650.1| putative methyltransferase small domain protein [Arthrobacter
           aurescens TC1]
          Length = 204

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 4/144 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+G G G + L L   +P      VD++ + + +   NA   G++    +L  +   
Sbjct: 62  HLLDIGCGWGPIALTLGLMAPHAHVHAVDVNERCIALTNENATALGLTNVAASLPHEVDP 121

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +VE  FD I SNPP    +  D L   +  + PR++  G    +      +D + R L  
Sbjct: 122 AVE--FDTIWSNPPI--RIGKDELHSLLLTWLPRLAPGGNAWLVVQKNLGSDSLQRWLAA 177

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243
           +   S  +         RI   RK
Sbjct: 178 ELDSSYTVSRESTSKTFRIIRVRK 201


>gi|146302843|ref|YP_001190159.1| methyltransferase small [Metallosphaera sedula DSM 5348]
 gi|145701093|gb|ABP94235.1| 16S rRNA m(2)G 1207 methyltransferase [Metallosphaera sedula DSM
           5348]
          Length = 186

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G G + + +   +P      +D++  A++ ++ N    G+ +R   L+SD  S 
Sbjct: 50  VADVGCGYGPIGIYVAIINPRLSVYMLDVNPLAVKASRENVERYGLGDRVKVLKSDLLSG 109

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            E     I SNPP  +   VD L    RD   R+   G + 
Sbjct: 110 FEFRVKAIYSNPPLSKG--VDVLERLARDAPERLEKGGWVQ 148


>gi|116253028|ref|YP_768866.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|166223435|sp|Q1ME53|PRMA_RHIL3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|115257676|emb|CAK08774.1| putative ribosomal protein L11 methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 292

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +  R V   LDLGTG+G + +A+  L+  P       DI   A ++A  N   NG++   
Sbjct: 147 VRSRPVRNALDLGTGSGVLAIAVRKLRNIPVL---ATDIDPIATKVAAENVRRNGIASGI 203

Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171
            T  +  F S      G FD+I++N
Sbjct: 204 VTRTAPGFHSTAFSEHGPFDLIIAN 228


>gi|14520742|ref|NP_126217.1| hypothetical protein PAB0359 [Pyrococcus abyssi GE5]
 gi|5457958|emb|CAB49448.1| Ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-n2-)-methyltransferase) (16S rRNA M2G1207
           methyltransferase) [Pyrococcus abyssi GE5]
          Length = 195

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TELL+++        I K D  +ILDLG G G + +   +   +   V  DI+ +A++IA
Sbjct: 45  TELLIENM-------ILKPDW-KILDLGCGYGVIGIVASRFVNYV--VMTDINKRAVQIA 94

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           + N   NGV    +    + +  VEG  F  I++NPP
Sbjct: 95  RKNIKINGVKNA-EVRLGNLYEPVEGEKFHSIITNPP 130


>gi|297581756|ref|ZP_06943678.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385]
 gi|297534163|gb|EFH73002.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|330872375|gb|EGH06524.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 366

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|325273728|ref|ZP_08139928.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51]
 gi|324101148|gb|EGB98794.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG+ E+   ++ D F ++  L      FDVI+++PP +I+   
Sbjct: 249 VDASGFALDGVERNAALNGIGEKLTCIEGDVFEALRELKAAEERFDVIIADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G + YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDLK-------NGEAAYRRLNEQAMRMLSKDGILVSASCSMHL 343


>gi|290967768|ref|ZP_06559321.1| methyltransferase small domain protein [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290782127|gb|EFD94702.1| methyltransferase small domain protein [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 252

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 17/87 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV----GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +LDLGTGTGA+ L L       +GV     ++++    +IA  N + N   E       D
Sbjct: 46  VLDLGTGTGAIPLILTA-----RGVRAVTALELNPIMADIAARNVILNHKEESIRIKHGD 100

Query: 157 ------WFSSVEGLFDVIVSNPPYIES 177
                 W  S  G F  + +NPPY E 
Sbjct: 101 YRQPGKWLKS--GSFAAVYANPPYREK 125


>gi|289624668|ref|ZP_06457622.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|330871120|gb|EGH05829.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGKGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|227874251|ref|ZP_03992450.1| O-methyltransferase [Oribacterium sinus F0268]
 gi|227839920|gb|EEJ50351.1| O-methyltransferase [Oribacterium sinus F0268]
          Length = 245

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
           R+ DL TG G V L L  ++      G++I  +A+E+A+ +   N  + R   L+ D   
Sbjct: 42  RVFDLCTGNGIVPLLLAAKTEAESIYGIEIQREAVELARRSVALNEEA-RIHILEGDLCK 100

Query: 159 ---------SSVEGLFDVIVSNPPYIE 176
                     S+   F V+ +NPPY++
Sbjct: 101 IQEQRTAEGKSLASSFTVVTANPPYMQ 127


>gi|227501269|ref|ZP_03931318.1| site-specific DNA-methyltransferase (adenine-specific)
           [Anaerococcus tetradius ATCC 35098]
 gi|227216502|gb|EEI81908.1| site-specific DNA-methyltransferase (adenine-specific)
           [Anaerococcus tetradius ATCC 35098]
          Length = 376

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIV 169
            LA +  S     +G DIS +A+ +AK+NA+  GV E    ++ D    +  +  + V++
Sbjct: 241 ALARIDYSKKLHILGSDISGRAISLAKNNAINAGVGEDIAFVKRDVKSLALAKDDYGVLI 300

Query: 170 SNPPY 174
           SNPPY
Sbjct: 301 SNPPY 305


>gi|254168246|ref|ZP_04875092.1| Putative RNA methylase family UPF0020 [Aciduliprofundum boonei
           T469]
 gi|197622755|gb|EDY35324.1| Putative RNA methylase family UPF0020 [Aciduliprofundum boonei
           T469]
          Length = 310

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 27/144 (18%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF---------SLPR 92
           IVR    +++H  L   DF       +  +FE R    L +   +           +L R
Sbjct: 114 IVRVYAGKNLHIGLELYDF-------AEQSFESRRAKNLPISYPITMHPRLARAMINLAR 166

Query: 93  IEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +++ +  RILD   GTG++ +  A++      K  G DI  + L+ +++N  T G+    
Sbjct: 167 VKRGE--RILDPFCGTGSILIEGAIIG----MKMHGSDIDERMLKASQTNLKTFGLEA-- 218

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPY 174
             L+      +EG +D IV++PPY
Sbjct: 219 -ILEKKDVGEIEGYYDAIVTDPPY 241


>gi|330505434|ref|YP_004382303.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01]
 gi|328919720|gb|AEB60551.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01]
          Length = 399

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 35/142 (24%)

Query: 100 RILDLGT--GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+LDL +  G   V  A    S  F    VD S  AL+  + NA  NG +E+   ++ D 
Sbjct: 224 RVLDLFSYIGGWGVQAAAFGASEVF---CVDASGFALDGVERNANLNGFAEKVTCVEGDV 280

Query: 158 FS------SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F+      S E  FDV++++PP +I+           R  D +       +G + YR + 
Sbjct: 281 FAALRELKSAEERFDVVIADPPAFIK-----------RKKDIK-------NGEAAYRRLN 322

Query: 211 DGVSRHLNKDGL-----CSVEI 227
           +   R LNKDG+     CS+ +
Sbjct: 323 ETAMRLLNKDGILVSASCSMHL 344


>gi|296139549|ref|YP_003646792.1| methyltransferase small [Tsukamurella paurometabola DSM 20162]
 gi|296027683|gb|ADG78453.1| methyltransferase small [Tsukamurella paurometabola DSM 20162]
          Length = 494

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG G       + +   + V  DIS +A   A ++A  NGV    D    DWF+ 
Sbjct: 163 VLDLGTGCGVHACGAARFA--DRVVATDISDRAAGFAAASAALNGVE--VDVRTGDWFAP 218

Query: 161 VEG-LFDVIVSNPPYI 175
           V G  FD++++NPP++
Sbjct: 219 VAGERFDLLLANPPFV 234


>gi|189466070|ref|ZP_03014855.1| hypothetical protein BACINT_02440 [Bacteroides intestinalis DSM
           17393]
 gi|189434334|gb|EDV03319.1| hypothetical protein BACINT_02440 [Bacteroides intestinalis DSM
           17393]
          Length = 476

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 19/116 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEK-------RDVVRILDLGTGTGAVCLALLKESPFFKG 124
           F+  P++    +S  A++L +I +       +++V   DL TGTG +   + K++   + 
Sbjct: 296 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGKELV--YDLYTGTGTIANFVSKQAR--QV 351

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           +G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 352 IGIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 406


>gi|121634223|ref|YP_974468.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           FAM18]
 gi|166223424|sp|A1KS36|PRMA_NEIMF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|120865929|emb|CAM09666.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis FAM18]
 gi|261393202|emb|CAX50821.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria
           meningitidis 8013]
 gi|325131505|gb|EGC54212.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M6190]
 gi|325137551|gb|EGC60133.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ES14902]
 gi|325141598|gb|EGC64063.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           961-5945]
 gi|325197639|gb|ADY93095.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           G2136]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|126437784|ref|YP_001073475.1| putative methylase [Mycobacterium sp. JLS]
 gi|126237584|gb|ABO00985.1| putative methylase [Mycobacterium sp. JLS]
          Length = 231

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 19/110 (17%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---RILDLGTGTG--AVCLALLKESPFFKGVG 126
           + P+ +++LL+D         +EK  +    R +DL TG+G  AV  AL   S       
Sbjct: 19  YAPQEDSQLLIDI--------MEKTGLAVGRRAVDLCTGSGVVAVNAALQGASSV---TA 67

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175
            DI  +A+  A+ NA+  GV    D     W  +VE   FD++  NPPY+
Sbjct: 68  FDICPRAVRCARGNALGAGVD--VDVHLGSWARAVEFDPFDLVTCNPPYV 115


>gi|2865243|gb|AAC15897.1| type IC modification subunit [Lactococcus lactis]
          Length = 531

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
           E R    I D   G+G++ L +   L         G +++     +A+ N + +G+  ER
Sbjct: 213 ETRAPFHIYDPAMGSGSLMLNIRRYLNNPDQVHYHGQELNTTTFNLARMNLILHGIDKER 272

Query: 150 F-----DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW S     FD +  NPPY
Sbjct: 273 MNLNNGDTLDADWPSEEPYQFDSVCMNPPY 302


>gi|330508056|ref|YP_004384484.1| phosphatidylethanolamine N-methyltransferase [Methanosaeta concilii
           GP-6]
 gi|328928864|gb|AEB68666.1| phosphatidylethanolamine N-methyltransferase, putative
           [Methanosaeta concilii GP-6]
          Length = 256

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P ++ R   R+LD+GTG G + L L +        GVDIS   +E A+ NA + G+   F
Sbjct: 39  PFLQGRRYKRVLDVGTGPGFMALILAEMG--LDVTGVDISSGMIEKARQNAQSMGLQVDF 96

Query: 151 DTLQSDWFSSVEGLFDVIVS 170
                +  S     FD++V+
Sbjct: 97  RHADGEQLSFDSESFDLLVN 116


>gi|309776642|ref|ZP_07671618.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915602|gb|EFP61366.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 400

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++D  + TG   L     +   + V VD+S  AL+ A  NA  N +  R   +++D F 
Sbjct: 230 RVMDCFSHTGGFALNAAYGNAQ-QVVAVDVSQTALDQAYENAKLNQLENRISFVKADVFK 288

Query: 160 SV----EGLFDVIVSNPP 173
            +    EG FD+I+ +PP
Sbjct: 289 YLDACEEGQFDIIILDPP 306


>gi|288554640|ref|YP_003426575.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4]
 gi|288545800|gb|ADC49683.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4]
          Length = 246

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           ILDL +G G + L L   +      GV+I  +  ++A+ N   N ++++     +D    
Sbjct: 49  ILDLCSGNGVIPLVLSTRTKA-TITGVEIQERLWDMARRNEELNKLNQQLHFELADLNHL 107

Query: 159 --SSVEGLFDVIVSNPPYIESV 178
             S  +G FDV+  NPPY E+V
Sbjct: 108 PPSIKKGSFDVVTCNPPYFETV 129


>gi|256544972|ref|ZP_05472341.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus vaginalis
           ATCC 51170]
 gi|256399339|gb|EEU12947.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus vaginalis
           ATCC 51170]
          Length = 455

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L  ++K     +LDL +GTG +     K +   K +G++I  +A+E A  NA  N +
Sbjct: 303 AIELANVDKNK--NVLDLYSGTGTITQLFAKSAN--KAMGIEIIEEAVEKAFDNAKENEI 358

Query: 147 SERFDTLQSDWFSS---VEGLFDVIVSNPP 173
            E  + +  D       V+G +D++V +PP
Sbjct: 359 -ENINFIAGDVLEKIDLVKGKYDIVVIDPP 387


>gi|121586350|ref|ZP_01676139.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80]
 gi|153820015|ref|ZP_01972682.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457]
 gi|153831236|ref|ZP_01983903.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39]
 gi|227080507|ref|YP_002809058.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2]
 gi|229506909|ref|ZP_04396417.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286]
 gi|261210421|ref|ZP_05924715.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341]
 gi|298500926|ref|ZP_07010728.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK
           757]
 gi|254783322|sp|C3LQP9|PRMA_VIBCM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|121549470|gb|EAX59498.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80]
 gi|126509437|gb|EAZ72031.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457]
 gi|148873279|gb|EDL71414.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39]
 gi|227008395|gb|ACP04607.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2]
 gi|229356014|gb|EEO20933.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286]
 gi|260840479|gb|EEX67045.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341]
 gi|297540430|gb|EFH76489.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK
           757]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|118478236|ref|YP_895387.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
 gi|196043411|ref|ZP_03110649.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB108]
 gi|225864863|ref|YP_002750241.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB102]
 gi|229185105|ref|ZP_04312293.1| Methyltransferase type 11 [Bacillus cereus BGSC 6E1]
 gi|118417461|gb|ABK85880.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
 gi|196025720|gb|EDX64389.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB108]
 gi|225785811|gb|ACO26028.1| methyltransferase, UbiE/COQ5 family [Bacillus cereus 03BB102]
 gi|228598362|gb|EEK55994.1| Methyltransferase type 11 [Bacillus cereus BGSC 6E1]
          Length = 261

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L + + ++E R   R+LD+ TG G V   L   +P FK  V +D++ K LE AK   ++N
Sbjct: 30  LQYVVQQVESRHNNRLLDIATGGGHVANVL---APLFKEVVALDLTEKMLENAKDFIISN 86

Query: 145 G 145
           G
Sbjct: 87  G 87


>gi|147675659|ref|YP_001218565.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|262167984|ref|ZP_06035683.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27]
 gi|172047477|sp|A5F3S3|PRMA_VIBC3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146317542|gb|ABQ22081.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|227012152|gb|ACP08362.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|262023517|gb|EEY42219.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|325129518|gb|EGC52345.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           OX99.30304]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|265984949|ref|ZP_06097684.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264663541|gb|EEZ33802.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 208

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 18  REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 73

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S +   I + N    G+       R D  Q     
Sbjct: 74  FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 132

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 133 TME-PFDLVFADPPY 146


>gi|262192556|ref|ZP_06050706.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT
           5369-93]
 gi|262031601|gb|EEY50189.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT
           5369-93]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|118586739|ref|ZP_01544176.1| N6-adenine-specific methylase [Oenococcus oeni ATCC BAA-1163]
 gi|118432827|gb|EAV39556.1| N6-adenine-specific methylase [Oenococcus oeni ATCC BAA-1163]
          Length = 209

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 10/112 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP TE + ++  +   P   K  +V  LDL  G+G++ +  +    + K   VD +  A+
Sbjct: 22  RPTTEKVKEALFSIIAP-YNKPGIV--LDLYAGSGSLGIEAVSRG-YRKAYLVDHARPAI 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180
           E+ ++N +     E F+ +++    +++        FD+++ +PPY +  IV
Sbjct: 78  EVIRNNVIATKSPENFEIIKAPASQAIKQFFDNQIRFDLVIFDPPYAKQHIV 129


>gi|302654689|ref|XP_003019145.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Trichophyton verrucosum HKI 0517]
 gi|291182849|gb|EFE38500.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Trichophyton verrucosum HKI 0517]
          Length = 325

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNA 141
           ILDLGTG G++ L LL+E   F G  VGVD S K++E+A+  A
Sbjct: 123 ILDLGTGNGSM-LTLLREEGGFSGPMVGVDYSVKSIELARQLA 164


>gi|262067059|ref|ZP_06026671.1| putative N-6 adenine-specific DNA methylase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379226|gb|EFE86744.1| putative N-6 adenine-specific DNA methylase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 243

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 5/83 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151
           ++  +ILD+GTG   + L L K++   K  GV+I   + ++A  N   N ++E+    +D
Sbjct: 42  KNTKKILDIGTGNAVIPLFLSKKTSA-KIYGVEIQEISYQLALRNININNLNEQIYIIYD 100

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
            +++       G FD+++SNPP+
Sbjct: 101 NIKNYLKHFTIGSFDIVLSNPPF 123


>gi|256833716|ref|YP_003162443.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM
           20603]
 gi|256687247|gb|ACV10140.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM
           20603]
          Length = 394

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RI+D+G G G + + + +  P       D+S +A+  A++    N V +R      D  
Sbjct: 244 ARIVDVGCGNGLLGVWIARHHPHVSVTMTDVSAQAVRSARATVDLNNVGDRVSVRWMDAL 303

Query: 159 SSV-EGLFDVIVSNPPYIESVIV 180
           S + +   D++V NPP+ +   V
Sbjct: 304 SQLPDHSADLVVCNPPFHDGTAV 326


>gi|119513581|ref|ZP_01632595.1| hypothetical protein N9414_10785 [Nodularia spumigena CCY9414]
 gi|119461763|gb|EAW42786.1| hypothetical protein N9414_10785 [Nodularia spumigena CCY9414]
          Length = 460

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +++ +  R++DLG G G +   L+K+  F +  GVD+S +ALEIA+ 
Sbjct: 276 LKQSNAKRVIDLGCGQGNLVKRLVKDGFFDQITGVDVSYRALEIAQE 322


>gi|330944165|gb|EGH46282.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 344

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|325204818|gb|ADZ00272.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240355]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGAG-SAVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|283836357|ref|ZP_06356098.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           youngae ATCC 29220]
 gi|291067724|gb|EFE05833.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           youngae ATCC 29220]
          Length = 378

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL+++P    V VD S  A+  ++ N  +N     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLEKNPQASVVFVDESPMAVASSRLNVESNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
           S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 292 SGVEPFRFNAVLCNPPFHQKHALTDNIAWEM 322


>gi|182418400|ref|ZP_02949694.1| methyltransferase domain family [Clostridium butyricum 5521]
 gi|237666919|ref|ZP_04526904.1| methyltransferase family protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182377782|gb|EDT75326.1| methyltransferase domain family [Clostridium butyricum 5521]
 gi|237658118|gb|EEP55673.1| methyltransferase family protein [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 262

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 4/50 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVS 147
           + I++LG G+G  C  L   SPF  + VG+D S KA+E+AK   + N + 
Sbjct: 56  MNIIELGCGSGRFCKEL---SPFINRYVGIDYSPKAIELAKEMVIRNNIK 102


>gi|156740571|ref|YP_001430700.1| RNA methyltransferase [Roseiflexus castenholzii DSM 13941]
 gi|156231899|gb|ABU56682.1| RNA methyltransferase, TrmA family [Roseiflexus castenholzii DSM
           13941]
          Length = 439

 Score = 38.1 bits (87), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 13/116 (11%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRI-------EKRDVVRILDLGTGTGAVCLALLKES 119
           L+  TF  RP T   V+ A A +L  +       E R   R+LDL  G GA  L L + +
Sbjct: 255 LADLTFLLRPTTFFQVNVAAAATLLNLIRAGLGDEARG--RLLDLYCGAGAFTLPLARNA 312

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW-FSSVEGLFDVIVSNPP 173
              + VGV+    A+  A+ +A  N +S  RF T  ++   ++++G FD +V +PP
Sbjct: 313 --IEIVGVEEYAGAVADAERSAAVNHISNVRFITGSAEAVLANLDGPFDAVVLDPP 366


>gi|309810841|ref|ZP_07704642.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
 gi|308435147|gb|EFP58978.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
          Length = 517

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 13/137 (9%)

Query: 89  SLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L R   R  VR  LDLGTG G     L         V  D++ +AL     NA  N + 
Sbjct: 163 TLARWTPRRTVRTALDLGTGCGVQAAHLAGHVEHI--VASDLATRALAFVCFNAALNDLD 220

Query: 148 ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              + L       V G  FD+IVSNPP++  +     G+   ++      DGG  G +  
Sbjct: 221 --VEVLAGSMLEPVAGRRFDLIVSNPPFV--ITPRRPGMPEYEY-----RDGGAVGDAVV 271

Query: 207 RTIADGVSRHLNKDGLC 223
           R +   V  HL   G+ 
Sbjct: 272 RNLVRDVGAHLEPGGVA 288


>gi|302541969|ref|ZP_07294311.1| methyltransferase type 12 [Streptomyces hygroscopicus ATCC 53653]
 gi|302459587|gb|EFL22680.1| methyltransferase type 12 [Streptomyces himastatinicus ATCC 53653]
          Length = 540

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G G +   LLK++ F + VGVD+S +AL  A      + + ER
Sbjct: 334 RVLDLGCGQGQLLGELLKDARFTEIVGVDVSIRALNEAARRLRLDRMPER 383


>gi|150024827|ref|YP_001295653.1| RNA methyltransferase [Flavobacterium psychrophilum JIP02/86]
 gi|149771368|emb|CAL42837.1| Probable RNA methyltransferase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 471

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+  AK NA  N +S           + 
Sbjct: 327 VYDLYTGTGTIAQFVSKQAK--KVIGVEAVPEAIADAKENAKRNNISNCEFFVGDMKNVF 384

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F +  G  DVI+++PP
Sbjct: 385 NDAFIAQHGHPDVIITDPP 403


>gi|327481744|gb|AEA85054.1| putative methyltransferase [Pseudomonas stutzeri DSM 4166]
          Length = 266

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 34/58 (58%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++DLG+G G + +A +++      +G+D+  + +  AK+NA   GV+++    Q D F
Sbjct: 60  VIDLGSGDGRIAIAAVRDRGADSALGIDLDPERIREAKANAEAAGVADKVSFEQGDLF 117


>gi|315445419|ref|YP_004078298.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium sp. Spyr1]
 gi|315263722|gb|ADU00464.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Mycobacterium sp. Spyr1]
          Length = 212

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R+LD+G GTG   + L      +  +GVD +  A+E A+ NA T G+  RFD
Sbjct: 44  RVLDVGCGTGEHTILLTAAG--YDVLGVDGAPSAVEQARHNAKTRGIDARFD 93


>gi|166159352|gb|ABY83144.1| Azi5 [Streptomyces sahachiroi]
          Length = 345

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V RI+D+G G GA  + L ++ P   G  VD+      +A       G++ R DT  +D+
Sbjct: 175 VRRIMDVGGGAGATLIELCRQHPHLSGTVVDLP-HVCALAGERIAAAGMTGRIDTAAADF 233

Query: 158 FS 159
           F+
Sbjct: 234 FA 235


>gi|194097642|ref|YP_002000680.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|291044650|ref|ZP_06570359.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|193932932|gb|ACF28756.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|291011544|gb|EFE03540.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
          Length = 311

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 238

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 239 ----QGQFDVVVAN 248


>gi|188590813|ref|YP_001795413.1| hypothetical protein RALTA_A0018 [Cupriavidus taiwanensis LMG
           19424]
 gi|170937707|emb|CAP62691.1| conserved hypothetical protein; putative methyltransferase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 297

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ILD+G GTG+  LAL +         GVDIS   L +A++ A   G++  F    +   +
Sbjct: 56  ILDVGCGTGSTTLALARHIGAQGHCTGVDISGPMLAVARTRAQREGINASFIHADAQEHA 115

Query: 160 SVEGLFDVIVS 170
                FD+IVS
Sbjct: 116 FAAASFDMIVS 126


>gi|146283352|ref|YP_001173505.1| putative methyltransferase [Pseudomonas stutzeri A1501]
 gi|145571557|gb|ABP80663.1| putative methyltransferase [Pseudomonas stutzeri A1501]
          Length = 348

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 34/58 (58%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++DLG+G G + +A +++      +G+D+  + +  AK+NA   GV+++    Q D F
Sbjct: 142 VIDLGSGDGRIAIAAVRDRGADSALGIDLDPERIREAKANAEAAGVADKVSFEQGDLF 199


>gi|126656703|ref|ZP_01727917.1| hypothetical protein CY0110_23731 [Cyanothece sp. CCY0110]
 gi|126621923|gb|EAZ92631.1| hypothetical protein CY0110_23731 [Cyanothece sp. CCY0110]
          Length = 210

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +LD+  GTG     LLK+ P  + +GVDIS + L+IAK         E + 
Sbjct: 44  VLDVACGTGIFVEMLLKDYPTLQIIGVDISSEMLKIAKQKCQNYSTVEFYQ 94


>gi|94500339|ref|ZP_01306872.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65]
 gi|94427638|gb|EAT12615.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65]
          Length = 240

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           +LDLG GTG + L +L ++      G+++   A   A +N   +  S R   LQ+D   W
Sbjct: 41  VLDLGMGTGVLGL-MLAQAFDAHITGIELDSDACRDAHTNIEASPFSNRVRVLQADIRQW 99

Query: 158 FSSVEGLFDVIVSNPPYIESVIVD 181
             +     D+IVSNPP+  + + +
Sbjct: 100 RDTRRS--DLIVSNPPFFTAHLAN 121


>gi|152987646|ref|YP_001348611.1| hypothetical protein PSPA7_3251 [Pseudomonas aeruginosa PA7]
 gi|150962804|gb|ABR84829.1| hypothetical protein PSPA7_3251 [Pseudomonas aeruginosa PA7]
          Length = 224

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 15/117 (12%)

Query: 69  SDTFEPR-----PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +D++E R     P  ELL   + A  L R+ +R   R+L +G G G     L  + P ++
Sbjct: 9   ADSYESRIGCLLPGYELLHLLSRAQLLARLPER--ARLLSVGCGAGGELAELAGQRPGWR 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            V +D+S   L +A+      G+ ER D    +    V GL     ++PPY  ++++
Sbjct: 67  FVALDLSADMLALARQRFAMLGLLERIDLHCGE----VAGL----PASPPYDAALLL 115


>gi|260905515|ref|ZP_05913837.1| hypothetical protein BlinB_09305 [Brevibacterium linens BL2]
          Length = 562

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 89  SLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L  +  RD V +  D+GTG G   L L + S   + +  DIS +AL +   +A  NGV 
Sbjct: 172 TLVSLTPRDQVSVSADIGTGCGIQALLLARHSD--RVIATDISERALHLTGLSAELNGVG 229

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
              +         +    D++VSNPP++ +   +    E RD
Sbjct: 230 -NIELRAGSMLEPLHEQVDLLVSNPPFVITPRTNVTTFEYRD 270


>gi|116750684|ref|YP_847371.1| type 11 methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116699748|gb|ABK18936.1| Methyltransferase type 11 [Syntrophobacter fumaroxidans MPOB]
          Length = 229

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWF 158
           ILD+GTG G +   L + +P  +  G+DIS   + +A+ N    G  E    ++  ++  
Sbjct: 54  ILDVGTGPGRLLPELARLNPRLRLTGLDISRAMVSVARENMAQAGFGETISIVEAAANHV 113

Query: 159 SSVEGLFDVIVSN 171
              +G FD +VS 
Sbjct: 114 PFPDGRFDAVVST 126


>gi|194337569|ref|YP_002019363.1| magnesium protoporphyrin O-methyltransferase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194310046|gb|ACF44746.1| magnesium protoporphyrin O-methyltransferase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 232

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD G GTG   + L K    +K   VDI+ + +  AK  A   GV E+  T + +   S
Sbjct: 69  ILDAGCGTGLFSIRLAKAG--YKVTSVDIASQMVNKAKEEATRQGV-EKNITFEVNTLES 125

Query: 161 VEGLFDVIV 169
           V G +D +V
Sbjct: 126 VSGTYDAVV 134


>gi|326802758|ref|YP_004320576.1| N-6 DNA Methylase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650095|gb|AEA00278.1| N-6 DNA Methylase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 287

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           G +I+     +AK N + +GV          DTL +DW +     FD+++ NPPY +   
Sbjct: 9   GQEINTSTYNLAKMNMMLHGVPTDHQKLRNGDTLDADWPTDEPTNFDIVLMNPPYSQKWS 68

Query: 180 VDCLGLEVRDFDPRISLDG 198
            D   L+    DPR +  G
Sbjct: 69  ADKGFLD----DPRFAAYG 83


>gi|314950056|ref|ZP_07853344.1| type I restriction-modification system, M subunit [Enterococcus
           faecium TX0082]
 gi|313643614|gb|EFS08194.1| type I restriction-modification system, M subunit [Enterococcus
           faecium TX0082]
          Length = 492

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 23/139 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGV 125
           + P+P  +L+    L       E +    + D   G+G++ L   K S       +F   
Sbjct: 201 YTPQPVAKLMTQIVLQGK----EDKKGFSVYDATMGSGSLLLNAKKYSHQPGTISYF--- 253

Query: 126 GVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           G +++     +A+ N + +GV          DTL  DW +     FD ++ NPPY     
Sbjct: 254 GQELNTSTYNLARMNMILHGVPIANQHLHNADTLDQDWPTEEPTNFDGVLMNPPYSAKWS 313

Query: 180 VDCLGLEVRDFDPRISLDG 198
            D   L+    DPR S  G
Sbjct: 314 ADKGFLD----DPRFSAYG 328


>gi|289626787|ref|ZP_06459741.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648352|ref|ZP_06479695.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330868460|gb|EGH03169.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 332

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   S     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDSAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|283853586|ref|ZP_06370823.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B]
 gi|283571011|gb|EFC19034.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B]
          Length = 286

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  PETELLVDS-ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           P T L +++ A  F+  RI   +  R LDLGTG+G + + L K      GVG+DI  +A+
Sbjct: 131 PTTALCLEAFADCFAAGRIGPGN--RFLDLGTGSGILGIGLCKLG--LTGVGLDIDPQAV 186

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
             A  N   N V            S  EG +FD++ +N   + + +V   G  VR   P
Sbjct: 187 WCAAENLRRNHVEAAMGLAVGGAGSLAEGAVFDIVAAN--ILAAPLVAMAGRLVRHVAP 243


>gi|229003841|ref|ZP_04161650.1| Methyltransferase [Bacillus mycoides Rock1-4]
 gi|228757442|gb|EEM06678.1| Methyltransferase [Bacillus mycoides Rock1-4]
          Length = 250

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           ++ + R  GW DF  +       T+E   E            + R +  DV  +LD+GTG
Sbjct: 10  YDKVGRSNGW-DFSKLEYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166
            G   L +   + F   +G+D S   +E A+SN     VS  RF  ++SD        FD
Sbjct: 56  GGENVLRIAPAALFM--IGIDNSSGMIEKAQSNLEKASVSNVRFFKMESDGLMFPHSFFD 113

Query: 167 VI-VSNPPYIESVIVDCL 183
           ++   + P++ + I   +
Sbjct: 114 IVSCCHAPFVAAEIAKVI 131


>gi|237809371|ref|YP_002893811.1| RNA methyltransferase, TrmA family [Tolumonas auensis DSM 9187]
 gi|237501632|gb|ACQ94225.1| RNA methyltransferase, TrmA family [Tolumonas auensis DSM 9187]
          Length = 447

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 81/154 (52%), Gaps = 27/154 (17%)

Query: 40  NAIVRSLKHESIHRILGWR------------DFYNVRLTLSSDTF---EPRPETELLVDS 84
           ++++ ++  E ++RILG +            + + +  ++S+ +F    P+ +T+ L  +
Sbjct: 233 DSVIHNINPERVNRILGSQQRVCYGAEAIEDELHGLTFSISAHSFYQVNPQ-QTDQLYAT 291

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL F+    E +    ++D+  G G + L L +E+   K +G+++  +A+E A+SNA  N
Sbjct: 292 ALQFA----ELKGDETVVDIYCGIGTISLYLAQEAS--KVIGIEVVSQAIEDARSNAKRN 345

Query: 145 GV--SERFDTLQSDWFSSV--EGL-FDVIVSNPP 173
            +  +E +     +   ++  +GL  DV+V +PP
Sbjct: 346 QLDNTEFYVGKAEEVVPALYAQGLRADVVVVDPP 379


>gi|297584203|ref|YP_003699983.1| putative RNA methylase [Bacillus selenitireducens MLS10]
 gi|297142660|gb|ADH99417.1| putative RNA methylase [Bacillus selenitireducens MLS10]
          Length = 380

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 11/77 (14%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESV---- 178
           +G D+  K +E+A++NA+  G+ +  +F  +++  F   +  F V+VSNPPY E +    
Sbjct: 256 LGTDLDPKMIELAENNAMEAGLGDIIQFKQMRASDFKPQKD-FGVVVSNPPYGERMQEKK 314

Query: 179 ----IVDCLGLEVRDFD 191
               I   LG  +R FD
Sbjct: 315 EVEQIYRELGQTLRPFD 331


>gi|39936145|ref|NP_948421.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris CGA009]
 gi|39649999|emb|CAE28523.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris CGA009]
          Length = 416

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G+G G + L  L E+      GV +S + L+ A + A   G+++R   L  D + 
Sbjct: 174 RVLDIGSGWGGLGL-YLAETCGADVTGVTLSREQLQAANTRAAERGLADRARFLLQD-YR 231

Query: 160 SVEGLFDVIVS 170
            V G FD IVS
Sbjct: 232 DVPGPFDRIVS 242


>gi|329964803|ref|ZP_08301826.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides fluxus YIT
           12057]
 gi|328524654|gb|EGF51717.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides fluxus YIT
           12057]
          Length = 511

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 15/114 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVG 126
           F+  P++    +S  A++L +I +          + DL TGTG +   + K++   + +G
Sbjct: 331 FKIGPKSFYQTNSEQAYNLYKIARNFAGLTGNELVYDLYTGTGTIANFVSKQAR--QVIG 388

Query: 127 VDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           ++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 389 IEYVPEAIEDAKVNAEINGIHNTLFFAGDMKDMLTQDFINQY-GRPDVIITDPP 441


>gi|242813375|ref|XP_002486154.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218714493|gb|EED13916.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 350

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 20/151 (13%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            VD  S  DDR        IV S+K+        +  F +    L +D  E +   +LL 
Sbjct: 44  FVDAASSFDDR------TTIVSSIKNYKYENGRRYHSFRDGEYLLPNDERE-QERLDLLH 96

Query: 83  DS---ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +    L+  L R    + VR+LD GTGTG   +   +E+P  + +G D+S        S
Sbjct: 97  HTFRLVLSGDLYRAPIHNPVRVLDFGTGTGVWAIDFAEENPSTEVLGTDLSPIQPSWFPS 156

Query: 140 NAVTNGVSERF--DTLQSDWFSSVEGLFDVI 168
           N        RF  D ++S+W    +  FD I
Sbjct: 157 NC-------RFEVDDVESEWLYGYQP-FDYI 179


>gi|154275640|ref|XP_001538671.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150415111|gb|EDN10473.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 357

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 4/42 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKS 139
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+ 
Sbjct: 185 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELARQ 225


>gi|41406223|ref|NP_959059.1| hypothetical protein MAP0125c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394571|gb|AAS02442.1| hypothetical protein MAP_0125c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 231

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 27/173 (15%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+++                +LD G G  AV L L +    F  VG+D S  
Sbjct: 34  EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLYLAERG--FTTVGLDQSPT 81

Query: 133 ALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+++A+  A   G+ S  F+      F+  +G F  IV      +S +   + +E+R+  
Sbjct: 82  AIKLAREKAARRGLTSASFEVADISDFTGYDGRFGTIV------DSTLFHSMPVELREGY 135

Query: 192 PRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            R  +     G S++  +       A+G    + +D L  V +G    +D +R
Sbjct: 136 QRSIVRAAAPGASYFVLVFDRNAMPAEGPVNAVTEDELREV-VGKYWVIDEIR 187


>gi|296273668|ref|YP_003656299.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
 gi|296097842|gb|ADG93792.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
          Length = 236

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWF 158
            +LD+G+G+G + L + +++P       ++  K  E+ K N+  N +  + +     D  
Sbjct: 36  ELLDIGSGSGILGLLVARDNPRLNLNQCEVQEKFQELTKINSKNNKIESKIYKGKYQDI- 94

Query: 159 SSVEGLFDVIVSNPPYIESVIV 180
            + +  FD+ VSNPP+  + +V
Sbjct: 95  -NFDKTFDICVSNPPFYHTNVV 115


>gi|302510681|ref|XP_003017292.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371]
 gi|291180863|gb|EFE36647.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 34/161 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106
           + +  ILG + F  + +        PRP+TE      +    +  R+     ++I+D+ T
Sbjct: 70  KPLQYILGDQPFGELTILCREGVLIPRPDTESYTTRIAQRLLAENRLNPTRSIQIIDICT 129

Query: 107 GTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN---AVTNG--VSERFDT----- 152
           GTG + L L        P    +GVDIS  AL +AK N    + NG  +S   D      
Sbjct: 130 GTGCIPLLLHSLLASSVPTISIIGVDISATALSLAKKNLEYNIGNGSLLSRARDEIHFVH 189

Query: 153 --------LQSDWFSSVEGL----------FDVIVSNPPYI 175
                   L+SD     E L           D+++SNPPYI
Sbjct: 190 ADILDPCYLESDGSELGEMLSRSNQGHSKGLDLLISNPPYI 230


>gi|169599420|ref|XP_001793133.1| hypothetical protein SNOG_02531 [Phaeosphaeria nodorum SN15]
 gi|160704606|gb|EAT90743.2| hypothetical protein SNOG_02531 [Phaeosphaeria nodorum SN15]
          Length = 253

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 13/85 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  RI+DLG GTG  C+ +  E P  + +GVD+S     I  S +  N   E  D + S
Sbjct: 16  KDPKRIIDLGCGTGIWCMDMADEHPGAELIGVDLS----PIQPSFSPPNCKFE-LDDVTS 70

Query: 156 DW--------FSSVEGLFDVIVSNP 172
            W        F ++ GL+  I   P
Sbjct: 71  PWTYPTSHFDFVNIRGLYGSIADWP 95


>gi|90580618|ref|ZP_01236423.1| hypothetical 16S RNA G1207 methylase RsmC [Vibrio angustum S14]
 gi|90438276|gb|EAS63462.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium angustum
           S14]
          Length = 340

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +ELL+++     LP++  +    +LD G G G +   +  + P       DIS  A+E A
Sbjct: 189 SELLLNN-----LPKLHGK----VLDFGCGAGVIGAVMKAKYPTIDLELCDISALAIESA 239

Query: 138 KSN-AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K    V N  + +F    +D + ++ G +  ++SNPP+
Sbjct: 240 KETFKVNNLEASKFTA--TDVYKTLTGPYQFLISNPPF 275


>gi|326403629|ref|YP_004283711.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301]
 gi|325050491|dbj|BAJ80829.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301]
          Length = 239

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 36/82 (43%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+++ GTG GA  L L    P  +GVG++   +   +A+ N  TNG       
Sbjct: 35  VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPY 174
                   + G  D   +NPP+
Sbjct: 95  TADITGPPLTGPVDHAFANPPW 116


>gi|315633698|ref|ZP_07888988.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis
           ATCC 33393]
 gi|315477740|gb|EFU68482.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis
           ATCC 33393]
          Length = 294

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|210622662|ref|ZP_03293302.1| hypothetical protein CLOHIR_01250 [Clostridium hiranonis DSM 13275]
 gi|210154100|gb|EEA85106.1| hypothetical protein CLOHIR_01250 [Clostridium hiranonis DSM 13275]
          Length = 386

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIE 176
           FK  G DI  +++EIAK NA   GV++  D   +D   F S E  +  IV+NPPY E
Sbjct: 255 FKIYGYDIDPESIEIAKENAEIAGVADYIDFAVADATEFKSDEE-YGFIVTNPPYGE 310


>gi|154174576|ref|YP_001407723.1| ribosomal protein L11 methyltransferase [Campylobacter curvus
           525.92]
 gi|153793114|gb|EAU00995.2| ribosomal protein L11 methyltransferase [Campylobacter curvus
           525.92]
          Length = 277

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 32/119 (26%)

Query: 73  EPRPETELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGAVCLALLKESP 120
           E +  T +++D ALAF     E             ++    LD+G G+G + +AL K   
Sbjct: 107 ELKGVTNIIIDPALAFGSGHHESTGSCLLFLQKYAKNADEALDVGCGSGILSIALAK--- 163

Query: 121 FFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSN 171
               +G D+       +A+E +KSNA+ NGV+         W  S+  L   +D++V+N
Sbjct: 164 ----LGCDVEACDTDEQAIESSKSNAMLNGVN-----FSKIWVGSIANLDKKYDIVVAN 213


>gi|108762522|ref|YP_629811.1| hypothetical protein MXAN_1559 [Myxococcus xanthus DK 1622]
 gi|108466402|gb|ABF91587.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 201

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P PE    VD  LA  L  ++  D V   DLG+G G + ++ +++      VGVDI+ 
Sbjct: 47  FVPTPEGA--VDGMLA--LAGVKPGDTV--YDLGSGDGRIVISAVQKHGAKHAVGVDINP 100

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +  A  NA   GV  + +  Q D F
Sbjct: 101 ERIAEANQNASQAGVKNKVEFRQGDLF 127


>gi|330965059|gb|EGH65319.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343


>gi|329939422|ref|ZP_08288758.1| transferase [Streptomyces griseoaurantiacus M045]
 gi|329301651|gb|EGG45545.1| transferase [Streptomyces griseoaurantiacus M045]
          Length = 514

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 18/126 (14%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +AL I       +G +   D  +   F  V
Sbjct: 178 LDLGTGSGIQALHASRHA--TRVTATDVNPRALHITALTLALSG-APAADLREGSLFEPV 234

Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLN 218
             E  +D+IVSNPP++ S             D R++  DGG+ G    RT+       LN
Sbjct: 235 PEEETYDLIVSNPPFVISP------------DARLTYRDGGMAGDDLCRTLVQQAGGRLN 282

Query: 219 KDGLCS 224
             G   
Sbjct: 283 PGGFAQ 288


>gi|320527423|ref|ZP_08028604.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei
           F0204]
 gi|320132136|gb|EFW24685.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei
           F0204]
          Length = 377

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 10/111 (9%)

Query: 67  LSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +SS +F +  PE TE+L  +AL  SL +I+  DVV  LD   G G + L   + +     
Sbjct: 204 ISSKSFYQVNPEQTEVLYRTAL--SLVKIKDTDVV--LDACCGIGTISLLAAQSAKHV-- 257

Query: 125 VGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +GV+I+ +A+  AK+NA  N +  +E +    +++   +    DV++ +PP
Sbjct: 258 IGVEINPQAIRDAKNNAKHNKLLNTEFYAADATEFIQRMNIKTDVVILDPP 308


>gi|306842721|ref|ZP_07475364.1| methyltransferase small [Brucella sp. BO2]
 gi|306287167|gb|EFM58669.1| methyltransferase small [Brucella sp. BO2]
          Length = 340

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV-DISC 131
           EP   +   +D   A     +EK     + DLG G G +    LK +   K + + +   
Sbjct: 172 EPGMFSHGAIDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVD 181
           +ALE A  N    G S     +  +WF      + G++D ++ NPP+ E  + D
Sbjct: 232 EALEAAGGNLERLGAS---IPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTD 282


>gi|159026016|emb|CAO86270.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 262

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           SI    G R+F+NV   LS  T + +  +  L++  L F +P  +      ILD+G G G
Sbjct: 18  SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139
           A    LLK  P    VG++IS    +IA+S
Sbjct: 72  ATTHYLLKYYPLTAIVGINIS--PTQIARS 99


>gi|222823924|ref|YP_002575498.1| methylase [Campylobacter lari RM2100]
 gi|222539146|gb|ACM64247.1| conserved hypothetical protein, possible methylase [Campylobacter
           lari RM2100]
          Length = 230

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQ 154
            ILD+G G G + L + ++ P  K   +DI  + ++++  NA  N     G+ E F   +
Sbjct: 32  NILDIGCGCGILGLLIKQKFPNSKVYLLDIQEQNIKLSYKNAKENKLEIQGICEDFLNYK 91

Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176
           SD        FD ++SNPP+ +
Sbjct: 92  SDI------KFDFLISNPPFYK 107


>gi|300710301|ref|YP_003736115.1| pyridine nucleotide-disulfide oxidoreductase, class II, putative
           [Halalkalicoccus jeotgali B3]
 gi|299123984|gb|ADJ14323.1| pyridine nucleotide-disulfide oxidoreductase, class II, putative
           [Halalkalicoccus jeotgali B3]
          Length = 183

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 8/74 (10%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD- 156
           R LD+ TG G  A+CLA       +    +D S + LEIA+  A   GVSER   ++ D 
Sbjct: 36  RALDVATGGGRNAICLA----EHGYAVDAIDCSEEGLEIARDRASDRGVSERIGFVRDDV 91

Query: 157 -WFSSVEGLFDVIV 169
             +    G +DVIV
Sbjct: 92  ETYDFPAGTYDVIV 105


>gi|297538148|ref|YP_003673917.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera sp. 301]
 gi|297257495|gb|ADI29340.1| ubiquinone biosynthesis O-methyltransferase [Methylotenera sp. 301]
          Length = 246

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+LD+G G G     +L ES +FKG   VG+D+  KAL +AK + + +G    +  +  +
Sbjct: 63  RVLDVGCGGG-----ILSESMYFKGAEVVGIDLGEKALSVAKLHQLESGAKVDYQYIAVE 117

Query: 157 WFSSVE-GLFDVI-----VSNPPYIESVIVDC 182
             ++ +   FDV+     + + P   S++  C
Sbjct: 118 QLAAQQPASFDVVTCMEMLEHVPDPASIVAAC 149


>gi|294339085|emb|CAZ87437.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Thiomonas sp. 3As]
          Length = 194

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG------ 145
           RIE      +L+LG+G+GA+C A        + V VD+  +A +  + +A  NG      
Sbjct: 46  RIEVSKPKVVLELGSGSGALCSAAASRWHDARLVTVDVDRQAPK--RLDAEHNGPSLKHS 103

Query: 146 --VSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
             V +  D   SD      G  DV V NPPYI
Sbjct: 104 HFVHDALDEALSDKIGLRLGTVDVAVCNPPYI 135


>gi|229525277|ref|ZP_04414682.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
 gi|229338858|gb|EEO03875.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
          Length = 244

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P       DIS  A+  ++   V N +        SD FS
Sbjct: 107 KVIDIGCGAGVLGCVMAKLNPNIALEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 164

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 165 DTGHHYDYIVTNPPF 179


>gi|331694923|ref|YP_004331162.1| type 11 methyltransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326949612|gb|AEA23309.1| Methyltransferase type 11 [Pseudonocardia dioxanivorans CB1190]
          Length = 264

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 35/72 (48%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LDLG GTGA   ALL  +P  +   VD S + L  A+      GV      L+    
Sbjct: 52  LRLLDLGCGTGASTAALLDAAPGAQVTAVDASAEMLAQARRKNWPPGVRFVHSRLEDLDR 111

Query: 159 SSVEGLFDVIVS 170
             V G FD I++
Sbjct: 112 VGVTGPFDGILA 123


>gi|288560192|ref|YP_003423678.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
 gi|288542902|gb|ADC46786.1| SAM-dependent methyltransferase [Methanobrevibacter ruminantium M1]
          Length = 271

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ILDLG G G++ + L K++      GVD + K LEI   NA   G+ E   TL+ D
Sbjct: 63  ILDLGCGDGSITIPLAKKAKSV--TGVDSAYKMLEILNENAKKEGI-ENIRTLEED 115


>gi|256377581|ref|YP_003101241.1| methyltransferase type 12 [Actinosynnema mirum DSM 43827]
 gi|255921884|gb|ACU37395.1| Methyltransferase type 12 [Actinosynnema mirum DSM 43827]
          Length = 455

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 12/80 (15%)

Query: 82  VDSALA---FSLPRIEKRDVVRIL---------DLGTGTGAVCLALLKESPFFKGVGVDI 129
           +D+ALA    SL R  +  V+ +L         DLG G GA+   L+ E  F + +GVD+
Sbjct: 243 LDNALAPPRVSLARQRRETVISVLREAGARSVVDLGCGGGALLRPLIAEPQFTRVLGVDV 302

Query: 130 SCKALEIAKSNAVTNGVSER 149
           S  AL +A      + + ER
Sbjct: 303 SAHALRVAARKLHLDTMGER 322


>gi|254422289|ref|ZP_05036007.1| hypothetical protein S7335_2439 [Synechococcus sp. PCC 7335]
 gi|196189778|gb|EDX84742.1| hypothetical protein S7335_2439 [Synechococcus sp. PCC 7335]
          Length = 475

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           ++  +  R++DLG G GA+   L ++  F + +GVD+S +ALE AK 
Sbjct: 280 LKSHNAKRVIDLGCGEGALLKVLWEDRFFERIMGVDVSFRALETAKK 326


>gi|330874682|gb|EGH08831.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343


>gi|332286776|ref|YP_004418687.1| 2-oxoacid ferredoxin oxidoreductase [Pusillimonas sp. T7-7]
 gi|330430729|gb|AEC22063.1| 2-oxoacid ferredoxin oxidoreductase [Pusillimonas sp. T7-7]
          Length = 1176

 Score = 38.1 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 13/115 (11%)

Query: 21   QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
            QV+    +VL  + R  LT A+ ++L     H+++ ++D Y V    +SD F      + 
Sbjct: 969  QVLAAEKAVLP-QGRPRLTMAVAQAL-----HKLMAYKDEYEVARLFTSDAFRQSLREQF 1022

Query: 81   LVDSALAFSL--PRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              D +L F L  P + +RD    + R L LG G   V  +LL      +G  +DI
Sbjct: 1023 EGDFSLRFHLAPPVLARRDPRTGIPRKLTLGPGMEKV-FSLLARGKILRGTWLDI 1076


>gi|325207478|gb|ADZ02930.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           NZ-05/33]
          Length = 330

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 257

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 258 ----QGQFDVVVAN 267


>gi|315303819|ref|ZP_07874310.1| protein YpsC [Listeria ivanovii FSL F6-596]
 gi|313627814|gb|EFR96456.1| protein YpsC [Listeria ivanovii FSL F6-596]
          Length = 424

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + ++IAK NAV  G+ +   F  LQ+  F + E  + V+V+NPPY E
Sbjct: 301 IGGDIDARLIDIAKQNAVEAGLGDLISFRQLQAADFQT-EDEYGVVVANPPYGE 353


>gi|313887799|ref|ZP_07821479.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846142|gb|EFR33523.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 443

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 13/106 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +I+ +D + + DL +GTG +   L + +   K +GV+I  +A+E A+ NA  NG+ +  +
Sbjct: 294 KIDAKDKL-VFDLYSGTGTITQVLAESAK--KVIGVEIVEEAVEAARENAKLNGI-DNVE 349

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPY--IESVIVDCLGLEVRDFDP 192
            + SD    ++ L    D+IV +PP   I    +D    ++ DFDP
Sbjct: 350 FIASDVLKVLDDLDKNPDLIVLDPPREGINPKAID----KIIDFDP 391


>gi|229120553|ref|ZP_04249798.1| Type I restriction-modification system, M subunit [Bacillus cereus
           95/8201]
 gi|228662838|gb|EEL18433.1| Type I restriction-modification system, M subunit [Bacillus cereus
           95/8201]
          Length = 530

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +     +   V   G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINYPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 IRLRNADTLNKDWPTEEPYTFDSVLMNPPY 303


>gi|198274964|ref|ZP_03207496.1| hypothetical protein BACPLE_01123 [Bacteroides plebeius DSM 17135]
 gi|198272411|gb|EDY96680.1| hypothetical protein BACPLE_01123 [Bacteroides plebeius DSM 17135]
          Length = 472

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K VG++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVARQAR--KVVGIEYVPEAIEDAKVNSALNGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
            +D F +  G  DVI+++PP
Sbjct: 387 TND-FIAEHGRPDVIITDPP 405


>gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
          Length = 383

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + L LL+ +   + V V +  + +EI +     +G+ ++   +  D   +
Sbjct: 78  VLEIGPGTGNLTLRLLQAAQ--RVVAVXLDARMVEILRKRVAEHGLEDQLTVICKDALKT 135

Query: 161 VEGLFDVIVSNPPY-IESVIVDCL 183
               FD++V+N PY I S +V  L
Sbjct: 136 DFPQFDLVVANIPYGISSPLVAKL 159


>gi|126347738|emb|CAJ89455.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC
           23877]
          Length = 248

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDL +G+G +     ++   F G GVDIS    E A++ AV  GV++R + + +D
Sbjct: 38  TRVLDLASGSGEMLCTWARDL-GFTGTGVDISTVFTERARARAVELGVADRVEFVHAD 94


>gi|28867642|ref|NP_790261.1| hypothetical protein PSPTO_0412 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28850877|gb|AAO53956.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|331014955|gb|EGH95011.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343


>gi|306845523|ref|ZP_07478092.1| methyltransferase, putative [Brucella sp. BO1]
 gi|306273844|gb|EFM55671.1| methyltransferase, putative [Brucella sp. BO1]
          Length = 211

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 21  REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 76

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S +   I + N    G+       R D  Q     
Sbjct: 77  FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 135

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 136 TME-PFDLVFADPPY 149


>gi|294790580|ref|ZP_06755738.1| type I restriction-modification system, M subunit [Scardovia
           inopinata F0304]
 gi|294458477|gb|EFG26830.1| type I restriction-modification system, M subunit [Scardovia
           inopinata F0304]
          Length = 566

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 30/133 (22%)

Query: 94  EKRDVVR-------ILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKSN 140
           E +DV+        I D   G+G++ L + KE             G +++     +A+ N
Sbjct: 239 ESKDVINNEDSTFTIYDPTMGSGSLLLTVQKELTGLDHRSRVHFYGQELNRTTFNLARMN 298

Query: 141 AVTNGVSER------FDTLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEV 187
            + +GV  +       DTL+SDW   V+         FD +V+NPPY +    +   ++ 
Sbjct: 299 LLMHGVGYQSMFLRNADTLESDWPDGVDAQGINHPLFFDAVVANPPYSQKWDNNATKMK- 357

Query: 188 RDFDPRISLDGGI 200
              DPR    G +
Sbjct: 358 ---DPRFKEYGKL 367


>gi|222085073|ref|YP_002543603.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
 gi|221722521|gb|ACM25677.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
          Length = 419

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 39/71 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L++G+G G + + L + +P     G+ +S + L++++  A   G+S+R      D+  
Sbjct: 176 RVLEIGSGWGGMGMYLAEANPGLDFTGITLSEEQLKVSRERAAKRGLSDRVRFELQDYRY 235

Query: 160 SVEGLFDVIVS 170
             +  FD IVS
Sbjct: 236 LKDRKFDRIVS 246


>gi|218888238|ref|YP_002437559.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759192|gb|ACL10091.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 286

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R LDLGTG+G + +   K      GV  DI   A+E A+ N V N V+   D    
Sbjct: 151 RPGLRFLDLGTGSGILAIGCAKLG--MTGVATDIDMLAVENAEENRVINAVAPAIDVRLG 208

Query: 156 DWFSSVEGLFDVIVSN 171
              ++    +DV+++N
Sbjct: 209 STEAAQGERYDVLLAN 224


>gi|4590509|gb|AAD26590.1|AF136577_6 unknown [Synechococcus sp. PCC 7002]
          Length = 113

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 35/61 (57%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LDLGTGT  + + L ++ P ++  G D++   L + + N V  G++ + + + +
Sbjct: 43  QETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQKNVVAAGLTAQIELVYA 102

Query: 156 D 156
           D
Sbjct: 103 D 103


>gi|330957099|gb|EGH57359.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|306840966|ref|ZP_07473707.1| methyltransferase, putative [Brucella sp. BO2]
 gi|306289023|gb|EFM60288.1| methyltransferase, putative [Brucella sp. BO2]
          Length = 236

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 46  REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 101

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S +   I + N    G+       R D  Q     
Sbjct: 102 FAGTGALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVG 160

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 161 TME-PFDLVFADPPY 174


>gi|187934189|ref|YP_001887561.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722342|gb|ACD23563.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 250

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R++DL TGTG +   L  +    +  G++I  + + +A+ +   N + ++   ++ 
Sbjct: 48  KNKYRVIDLCTGTGIIPFLLYGKYNPKEVYGLEIQEEMVNMAEKSVKLNALEDKITFIKE 107

Query: 156 DWFSSVEGL-----FDVIVSNPPY 174
           D   ++E L     FDV+  NPPY
Sbjct: 108 D-LKNIEYLKKMDKFDVVTVNPPY 130


>gi|33322013|gb|AAQ06725.1|AF496069_1 probable methyltransferase [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 206

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 25/137 (18%)

Query: 57  WRDFYNV-------RLTLSSDTFEP--RPETELLVDSALAF----------SLPRIEKRD 97
           W+ +Y+V        +    + ++P  + +  + +D  LAF          ++  IE+  
Sbjct: 43  WQKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 102

Query: 98  V--VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           V  + + D+GTG+G + +A  K     K V   DIS +++  AK NA  NG+ +     +
Sbjct: 103 VKPLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIHD-IALQK 159

Query: 155 SDWFSSVEGLFDVIVSN 171
           +   + V+G FD+IV+N
Sbjct: 160 TSLLAGVDGKFDLIVAN 176


>gi|37521087|ref|NP_924464.1| hypothetical protein glr1518 [Gloeobacter violaceus PCC 7421]
 gi|35212083|dbj|BAC89459.1| glr1518 [Gloeobacter violaceus PCC 7421]
          Length = 440

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           RILD G G+G   LAL + +P  + VG+D+S +++ +A+     +G  S  F  L  +  
Sbjct: 59  RILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAEFHALPIERV 118

Query: 159 SSVEGLFDVI 168
             +   FD+I
Sbjct: 119 GELGEDFDLI 128


>gi|331091394|ref|ZP_08340233.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330404258|gb|EGG83805.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 454

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 10/82 (12%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQ 154
           D + I DL +GTG +   L   +P  K V GV+I  +A+E AK NA  NG+S  +F  + 
Sbjct: 310 DNMTIYDLFSGTGTIGQIL---APVAKEVIGVEIIEEAVEAAKENAEHNGLSNCKF--IA 364

Query: 155 SDWFS---SVEGLFDVIVSNPP 173
            D F     +E   DVIV +PP
Sbjct: 365 GDVFKVLDEIEEKPDVIVLDPP 386


>gi|328950316|ref|YP_004367651.1| Ribosomal protein L11 methyltransferase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450640|gb|AEB11541.1| Ribosomal protein L11 methyltransferase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 256

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LDLGTG+G + +A        + +GVD+    +  A++NA  N    RF        
Sbjct: 122 ARVLDLGTGSGILAIAAAMRG--AEVLGVDVDASVIPQAEANARRNQAPARFKVGS---L 176

Query: 159 SSVEGLFDVIVSN 171
            + E  +D++V+N
Sbjct: 177 EAAEPPYDLVVAN 189


>gi|238021858|ref|ZP_04602284.1| hypothetical protein GCWU000324_01762 [Kingella oralis ATCC 51147]
 gi|237866472|gb|EEP67514.1| hypothetical protein GCWU000324_01762 [Kingella oralis ATCC 51147]
          Length = 295

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK        GVDI  +A++ +  NAV N V   F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLG-AGSATGVDIDPQAIKASNDNAVQNEVQAAFYLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|223717793|dbj|BAH22767.1| putative methyltransferase [Microcystis aeruginosa K-139]
          Length = 262

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           SI    G R+F+NV   LS  T + +  +  L++  L F +P  +      ILD+G G G
Sbjct: 18  SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139
           A    LLK  P    VG++IS    +IA+S
Sbjct: 72  ATTHYLLKYYPLTAIVGINIS--PTQIARS 99


>gi|210621682|ref|ZP_03292758.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
 gi|210154661|gb|EEA85667.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
          Length = 183

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +L ++E  +    LD+G GTG+VC+    ++P  K V V+    A+E+ ++N    GV
Sbjct: 20  AIALSKLEIENAKSFLDVGAGTGSVCIEAALKNPEMKVVAVERHEHAVELIEANKEKFGV 79

Query: 147 S-----ERFDTLQSD 156
                 E +   ++D
Sbjct: 80  KNLEILEEYAPFETD 94


>gi|166368737|ref|YP_001661010.1| putative methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166091110|dbj|BAG05818.1| putative methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 262

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           SI    G R+F+NV   LS  T + +  +  L++  L F +P  +      ILD+G G G
Sbjct: 18  SIREFYGEREFFNVGYWLSH-TQDQQEASSTLMEKLLEF-IPNKQGT----ILDVGCGLG 71

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKS 139
           A    LLK  P    VG++IS    +IA+S
Sbjct: 72  ATTHYLLKYYPLTAIVGINIS--PTQIARS 99


>gi|161869353|ref|YP_001598520.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           053442]
 gi|161594906|gb|ABX72566.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           053442]
          Length = 330

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F   + L S  
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGKDNAEQNNVDAQFYLPEQLPS-- 258

Query: 158 FSSVEGLFDVIVSN 171
                G FDV+V+N
Sbjct: 259 -----GQFDVVVAN 267


>gi|110803474|ref|YP_697596.1| hypothetical protein CPR_0266 [Clostridium perfringens SM101]
 gi|110683975|gb|ABG87345.1| conserved hypothetical protein [Clostridium perfringens SM101]
          Length = 249

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++  V  LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 33  VDAVLLANFANVNRKHSV--LDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90

Query: 142 VTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
             N V ++       L+    +     FDV+  NPPY
Sbjct: 91  KINDVQDKVSFICGDLKDKELNRSMPKFDVVTVNPPY 127


>gi|16329224|ref|NP_439952.1| hypothetical protein slr1117 [Synechocystis sp. PCC 6803]
 gi|1651704|dbj|BAA16632.1| slr1117 [Synechocystis sp. PCC 6803]
          Length = 253

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P  ETE L     A  L RI+    +++ D+G GTGA  L L  +    +   +DI  + 
Sbjct: 22  PGSETETLR----ALELTRIDPLAKLQVADIGCGTGASTLVLASKLQNAQITAIDIFPEF 77

Query: 134 LEIAKSNAVTNGVSERFDTL 153
           L++  + A   G SE+ +TL
Sbjct: 78  LDVLSTRAKVMGYSEKIETL 97


>gi|303247328|ref|ZP_07333601.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
 gi|302491242|gb|EFL51131.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
          Length = 207

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 34/156 (21%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD--WF 158
           LD+GTG+ AVC+ L K +     V +D   + LE+A+ N   + + +ERF  L++D    
Sbjct: 42  LDVGTGSAAVCIELAKITD-LSMVCLDAKPEVLELARENVTRHALPAERFRFLEADVTAI 100

Query: 159 SSVEGLFDVIVS--NPPYIE-----------------SVIVDCLGL-------EVRDFDP 192
              +G  D++VS  + P+ E                 S ++ C G        EVR   P
Sbjct: 101 PMEDGTVDLLVSRGSIPFWEDHVAAFAELNRVLAPGGSALIGC-GFSRYQPIEEVRAMRP 159

Query: 193 RISLDGGIDGLSHYRTIADG-VSRHLNKDGLCSVEI 227
           + S +G  D  + ++  ADG + R L + G+   E+
Sbjct: 160 KWSGEGEKDSRNDWK--ADGYLPRVLKQAGIADAEV 193


>gi|213967814|ref|ZP_03395961.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301382451|ref|ZP_07230869.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061157|ref|ZP_07252698.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           K40]
 gi|302132050|ref|ZP_07258040.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927590|gb|EEB61138.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILISASCSMHL 343


>gi|218441023|ref|YP_002379352.1| RNA methylase [Cyanothece sp. PCC 7424]
 gi|218173751|gb|ACK72484.1| putative RNA methylase [Cyanothece sp. PCC 7424]
          Length = 211

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 9/87 (10%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKA 133
           P +E +V   L  +  ++ + D+  + DLG+G G + +   K +  +  +GVGV+I  K 
Sbjct: 56  PTSEAVVQEMLRIA--QVSENDI--LYDLGSGDGRIPI---KAAQLYGARGVGVEIDPKL 108

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++ A  NA   GVS+R   ++ D F +
Sbjct: 109 VQEATENAKKAGVSDRVQFIEQDLFQT 135


>gi|145355780|ref|XP_001422128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582368|gb|ABP00445.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 493

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 13/84 (15%)

Query: 100 RILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-------- 149
           R+LD+   TG   L  AL   S     V VD S  AL++AK NA  NG+ ++        
Sbjct: 318 RVLDVCCYTGGFALNAALGGASDV---VAVDSSESALDMAKKNAELNGLQDKVNFVRADA 374

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPP 173
           FD +Q++  +   G +DV+V +PP
Sbjct: 375 FDFMQAEIDAGRAGSYDVVVLDPP 398


>gi|145596403|ref|YP_001160700.1| methyltransferase small [Salinispora tropica CNB-440]
 gi|145305740|gb|ABP56322.1| 16S rRNA m(2)G 1207 methyltransferase [Salinispora tropica CNB-440]
          Length = 201

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G +   L    P      VD++ +A E+  +NA   G + R      D   +
Sbjct: 65  LLDLGCGFGPITCVLATSVPSATVWAVDVNERARELTTANAARVGAAGRVRVAPPDAVPA 124

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FD I SNPP    +  + L   +  + PR++  GG+  L         V+RHL  D
Sbjct: 125 AV-TFDQIWSNPPI--RIGKNELHQLLLRWLPRLA-PGGVAWLV--------VARHLGGD 172

Query: 221 GL 222
            L
Sbjct: 173 SL 174


>gi|59712995|ref|YP_205771.1| ribosomal protein L11 methyltransferase [Vibrio fischeri ES114]
 gi|197335525|ref|YP_002157181.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11]
 gi|81310870|sp|Q5E263|PRMA_VIBF1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710127|sp|B5FC65|PRMA_VIBFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|59481096|gb|AAW86883.1| methylase for 50S ribosomal subunit protein L11 [Vibrio fischeri
           ES114]
 gi|197317015|gb|ACH66462.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11]
          Length = 294

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 19/113 (16%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDV--VRILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTSLCLEWLEGLDLEGKTVVDFGCGSGILAIAAIKLGA 182

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF-DVIVSN 171
             K +G+DI  +A+  +K NA  NGV+++ +  L  D     EGL  DV+V+N
Sbjct: 183 A-KVIGIDIDPQAILASKDNATRNGVADQIELYLPQD---QPEGLIADVVVAN 231


>gi|45200911|ref|NP_986481.1| AGL186Cp [Ashbya gossypii ATCC 10895]
 gi|44985681|gb|AAS54305.1| AGL186Cp [Ashbya gossypii ATCC 10895]
          Length = 219

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 101 ILDLGTGTGAVCLALLKE---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + ++G G+G V   +++     P    +  D+S  AL        + G        ++D 
Sbjct: 45  VCEVGCGSGVVTAFMMQHEMPQPMSVYLATDVSPWALATTAETVQSTGCRGALCAARTDL 104

Query: 158 FSSV-EGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            + + +G  DV+V NPPY+  E V       E  +    ++L+GG DG+     +   + 
Sbjct: 105 VTGLADGQVDVLVFNPPYVPAEGVPQGPAAGEREERWLEVALEGGADGMEVTTRMLGALG 164

Query: 215 RHLNKDGL 222
           R L   G+
Sbjct: 165 RVLASSGV 172


>gi|30022540|ref|NP_834171.1| Type I restriction-modification system methylation subunit
           [Bacillus cereus ATCC 14579]
 gi|29898098|gb|AAP11372.1| Type I restriction-modification system methylation subunit
           [Bacillus cereus ATCC 14579]
          Length = 468

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +   +      K  G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIQNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303


>gi|317177250|dbj|BAJ55039.1| Type I restriction enzyme M protein [Helicobacter pylori F16]
          Length = 543

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315


>gi|320012636|gb|ADW07486.1| Methyltransferase type 11 [Streptomyces flavogriseus ATCC 33331]
          Length = 290

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+DLG GTGA   ALL   P      VD S + L+  +  A  +GV  R  T+++D
Sbjct: 56  IVDLGCGTGAGTFALLARFPEAHVTAVDSSAEHLQRLREKAGADGVEGRVRTVRAD 111


>gi|150866938|ref|XP_001386704.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces
           stipitis CBS 6054]
 gi|149388194|gb|ABN68675.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces
           stipitis CBS 6054]
          Length = 318

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 98/245 (40%), Gaps = 41/245 (16%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS-ALAFSLPRIEKRD-----VVRILDL 104
           +  ILG + F ++ +        PR ETE  V   A AF   +    +      + ++D 
Sbjct: 61  LQYILGSQPFGSLDIHCRPGVLIPRWETEEWVTELADAFGKRKNTTNNGKLSNSLNVIDA 120

Query: 105 GTGTGAVCLALLKESPFF-KGV-----GVDISCKALEIAKSNAVTNGVS----------- 147
            TGTG  C+ LL  S    KGV     G DIS +A +++  N      S           
Sbjct: 121 CTGTG--CIPLLLHSDLLSKGVCSNVTGFDISLEAYKLSCENLAIYESSRDISDNGKVSF 178

Query: 148 ERFDTLQSDWFSSVEGL---FDVIVSNPPYI------ESVIVDCLGLEVRDFDPRISLDG 198
           +  D    D    +E      D+I SNPPYI       SV  +     VR  +P ++L G
Sbjct: 179 KHVDIFSHDLLEQLEVTSRSVDLITSNPPYIPLQDYKSSVDFNGTSRSVRLHEPALALVG 238

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR--IFESRKLFLVNAFKDYGGN 256
             +    Y T+   +            E+GY ++   V+  +F  +K + V  + D  GN
Sbjct: 239 ENE---FYETLITKLVLPTKAKAFV-FELGYEEQAQRVKELLFPFKK-WKVKRYTDSAGN 293

Query: 257 DRVLL 261
            R +L
Sbjct: 294 IRCVL 298


>gi|66044239|ref|YP_234080.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
 gi|75503293|sp|Q4ZXT0|RSMC_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|63254946|gb|AAY36042.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 332

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|56967300|pdb|1XXL|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
           Subitilis At 2.1 A Resolution
 gi|56967301|pdb|1XXL|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
           Subitilis At 2.1 A Resolution
 gi|99032625|pdb|2GLU|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
           Subitilis
 gi|99032626|pdb|2GLU|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
           Subitilis
          Length = 239

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVT 143
           +L   +   E R   R+LD+G G G   LA    SP+ +  +GVD + + +E+A S A  
Sbjct: 9   SLGLXIKTAECRAEHRVLDIGAGAGHTALAF---SPYVQECIGVDATKEXVEVASSFAQE 65

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIV 169
            GV   RF    ++     +  FD+I 
Sbjct: 66  KGVENVRFQQGTAESLPFPDDSFDIIT 92


>gi|330942318|gb|EGH44942.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 332

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|330883391|gb|EGH17540.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 190

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 52  VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 108

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 109 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 146


>gi|329766402|ref|ZP_08257948.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137171|gb|EGG41461.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 181

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 35/158 (22%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L  + + P  +T  + D         IEK + +  LD+G+G+G +   L K   F  G  
Sbjct: 8   LRDEEYSPAEDTFFIAD--------YIEKENGLTALDVGSGSGYLTKLLAKNFIFVVGTD 59

Query: 127 VD-ISCKALEIAKSNAV-TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES-VIVDCL 183
           ++ I  K    +  N V  NG     D L+S+        FD++V N PY+ +  ++D  
Sbjct: 60  INFIVLKNQTYSTKNLVCCNGS----DALKSE--------FDLVVCNLPYLATDQVLDA- 106

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                      + DGGIDG    + I D + +++   G
Sbjct: 107 -----------TTDGGIDGFEIPKKIFDSIYKNIKVGG 133


>gi|317500123|ref|ZP_07958357.1| hypothetical protein HMPREF1026_00299 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087648|ref|ZP_08336576.1| hypothetical protein HMPREF1025_00159 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316898478|gb|EFV20515.1| hypothetical protein HMPREF1026_00299 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330399827|gb|EGG79487.1| hypothetical protein HMPREF1025_00159 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 203

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 63/143 (44%), Gaps = 31/143 (21%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLAL 115
           N+    S  TF+ +    +T +  + A     P IE    +++  ILDLG GTGA+ L  
Sbjct: 2   NITKQKSQKTFDKQAADYDTNIQGEHARKLYKPIIENLKNKNIHSILDLGCGTGAL-LKE 60

Query: 116 LKESPFFKGV-GVDISCKALEIAKSNAVTN------GVSERFDTLQSDWFSSVEGLFDVI 168
           +KE    + + G+DIS   LEIAK N + N      G SER     S         FD I
Sbjct: 61  IKELNIAEQLFGIDISPNMLEIAK-NKLGNDATLILGDSERLPFEDSS--------FDAI 111

Query: 169 VSN--------PPYIESVIVDCL 183
           V N        P  +E  +  CL
Sbjct: 112 VCNDSFHHYPQPDIVEKEVSRCL 134


>gi|315223192|ref|ZP_07865053.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
 gi|315187624|gb|EFU21378.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
          Length = 248

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS L    P + KR +  I+DL  G GAV L     +   + + V+I  +  ++A+ + 
Sbjct: 33  VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGLFASTRTK-AQIIAVEIQERLADMAERSI 89

Query: 142 VTNGVSERFDTLQSD---WFSSVEG-LFDVIVSNPPYIE 176
             NG++ +   +Q D       ++G   D+I+ NPPY +
Sbjct: 90  ELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFK 128


>gi|289580772|ref|YP_003479238.1| methylase [Natrialba magadii ATCC 43099]
 gi|289530325|gb|ADD04676.1| methylase [Natrialba magadii ATCC 43099]
          Length = 202

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 13/177 (7%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + ++ ++P  ++ELL ++A +    R  +     IL++GTG+G V   +  E+   + + 
Sbjct: 1   METEVYQPAEDSELLAEAACSQLSKRGREGPDATILEVGTGSGYVANRVADET-GARVIA 59

Query: 127 VDISCKALEIAKSNAVT------NGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVI 179
            D++  A+  A+S           G S   +T+++D  S   +  FD ++ NPPY+ +  
Sbjct: 60  SDLNPHAVRQARSEGSEESSEKGTGRSGAVETVRADLVSPFADDTFDAVLFNPPYLPTEP 119

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            +    E  D+    +L GG DG +        V R L  DG+  + +     VD V
Sbjct: 120 EN----EWDDWMEH-ALSGGEDGRAVIDPFLASVGRVLAPDGVVYLLVSSLTGVDEV 171


>gi|268612020|ref|ZP_06145747.1| putative RNA methylase [Ruminococcus flavefaciens FD-1]
          Length = 353

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           S  F+G+G DI   A+ +   NA   G+  R    Q+D    V+    +++ NPPY E +
Sbjct: 233 SASFRGIGFDIDDDAVALTLDNAHKAGIKSRLKIEQADITKFVQPEDSIVICNPPYGERM 292

Query: 179 I 179
           +
Sbjct: 293 L 293


>gi|288930665|ref|YP_003434725.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642]
 gi|288892913|gb|ADC64450.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642]
          Length = 197

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 12/117 (10%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + F N ++ L      P    E+++ + +        + D+  + DLG GTG + +A   
Sbjct: 14  KGFKNPKIFLEQYVTPPALVAEIVLFAKM--------QNDLDLVFDLGCGTGIISIASAL 65

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
              F   +GVD+  +AL +A+ N+ T GV   F     + F++ +     ++ NPP+
Sbjct: 66  LGAF--SIGVDVDREALSVARENSKTCGVPVDFVLCDVENFNAKKK--GTVIMNPPF 118


>gi|239501749|ref|ZP_04661059.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB900]
          Length = 337

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KIEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|330954994|gb|EGH55254.1| SAM-dependent methyltransferase [Pseudomonas syringae Cit 7]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|313123576|ref|YP_004033835.1| ribosomal protein l11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280139|gb|ADQ60858.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 314

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + + D+GTG+G + +A  K     K V   DIS +++  AK NA  NG+ +     ++  
Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAKENAALNGIHD-IALQKTSL 234

Query: 158 FSSVEGLFDVIVSN 171
            + V+G FD+IV+N
Sbjct: 235 LAGVDGKFDLIVAN 248


>gi|300853355|ref|YP_003778339.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528]
 gi|300433470|gb|ADK13237.1| predicted methyltransferase [Clostridium ljungdahlii DSM 13528]
          Length = 250

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +  +I+ +  + I+DL +GTG V   +  ++      G++I    +++A  + 
Sbjct: 33  VDAVLLANFAKIKPK--MNIIDLCSGTGIVPFIIAGKTKAQHITGMEIQKDMVDMATRSV 90

Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY 174
           + NG+ ++ + +  D   F  ++ L   DV+  NPPY
Sbjct: 91  IFNGMEKKVEFIHRDLVDFEFLKKLPKADVVTVNPPY 127


>gi|302812046|ref|XP_002987711.1| hypothetical protein SELMODRAFT_126447 [Selaginella moellendorffii]
 gi|300144603|gb|EFJ11286.1| hypothetical protein SELMODRAFT_126447 [Selaginella moellendorffii]
          Length = 188

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTL----- 153
            ILD GTG+G + +A LK       VGVDI   A+  + SNA  N +    F+       
Sbjct: 62  NILDYGTGSGILAIAALKMG-ASHAVGVDIDPMAVSSSASNATLNALDPHAFEVFIAAAD 120

Query: 154 -QSDWFSSVEGLFDVIVSN 171
            + D      G+FDV+V+N
Sbjct: 121 DKDDPVPHGPGVFDVVVAN 139


>gi|297829886|ref|XP_002882825.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328665|gb|EFH59084.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 278

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)

Query: 63  VRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
           +RL  S  + +EP  ++  LVD+ LA     IE    +  +++G G+G V  +L+     
Sbjct: 40  IRLVSSHREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLKN 98

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           E P    +  D +  A  + K     +GV    D + +D  S +E    G  DVIV NPP
Sbjct: 99  EVPGVHYLATDTNPIATRVTKETLQAHGVDA--DVICADIASVLEKRLSGSVDVIVVNPP 156

Query: 174 YIES 177
           Y+ +
Sbjct: 157 YVPT 160


>gi|257482977|ref|ZP_05637018.1| hypothetical protein PsyrptA_06961 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330891351|gb|EGH24012.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985922|gb|EGH84025.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011782|gb|EGH91838.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|220922373|ref|YP_002497675.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium
           nodulans ORS 2060]
 gi|219946980|gb|ACL57372.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium
           nodulans ORS 2060]
          Length = 420

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G++ L L   +      G+ +S K L  A++ A   G+++R      D F 
Sbjct: 180 RVLDIGCGWGSLALYLAAVAGCDDVRGITLSSKQLARARAQAEVQGLADRVRFALED-FR 238

Query: 160 SVEGLFDVIVS 170
             +G FD IVS
Sbjct: 239 RTQGTFDRIVS 249


>gi|150008602|ref|YP_001303345.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Parabacteroides distasonis ATCC 8503]
 gi|255014400|ref|ZP_05286526.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides
           sp. 2_1_7]
 gi|298376132|ref|ZP_06986088.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Bacteroides sp. 3_1_19]
 gi|301309500|ref|ZP_07215442.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Bacteroides sp. 20_3]
 gi|149937026|gb|ABR43723.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Parabacteroides distasonis ATCC 8503]
 gi|298267169|gb|EFI08826.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Bacteroides sp. 3_1_19]
 gi|300832589|gb|EFK63217.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Bacteroides sp. 20_3]
          Length = 247

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122
           F+   ET   ++  L+F + +I +R  +          ILD+ TGTG + +++ K+    
Sbjct: 26  FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170
             VG DIS   +E+ +      G SE     Q D    +  E  FD + +
Sbjct: 86  HIVGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTA 135


>gi|66047988|ref|YP_237829.1| hypothetical protein Psyr_4764 [Pseudomonas syringae pv. syringae
           B728a]
 gi|289672466|ref|ZP_06493356.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae
           FF5]
 gi|302188128|ref|ZP_07264801.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae
           642]
 gi|63258695|gb|AAY39791.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970967|gb|EGH71033.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330980022|gb|EGH78288.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 398

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|77359314|ref|YP_338889.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588623|sp|Q3IIC0|PRMA_PSEHT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|76874225|emb|CAI85446.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 293

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K   
Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N
Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN 229


>gi|53713830|ref|YP_099822.1| RNA methyltransferase [Bacteroides fragilis YCH46]
 gi|60682048|ref|YP_212192.1| putative RNA methyltransferase [Bacteroides fragilis NCTC 9343]
 gi|253565800|ref|ZP_04843255.1| RNA methyltransferase [Bacteroides sp. 3_2_5]
 gi|265764175|ref|ZP_06092743.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           2_1_16]
 gi|52216695|dbj|BAD49288.1| RNA methyltransferase [Bacteroides fragilis YCH46]
 gi|60493482|emb|CAH08268.1| putative RNA methyltransferase [Bacteroides fragilis NCTC 9343]
 gi|251946079|gb|EES86486.1| RNA methyltransferase [Bacteroides sp. 3_2_5]
 gi|263256783|gb|EEZ28129.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           2_1_16]
          Length = 472

 Score = 38.1 bits (87), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 17/115 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A++L ++  RD         + DL TGTG +   + +++   K +
Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGDELVYDLYTGTGTIANFVSRQAR--KVI 351

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405


>gi|330723247|gb|AEC45617.1| Type I restriction-modification system methyltransferase subunit
           [Mycoplasma hyorhinis MCLD]
          Length = 906

 Score = 37.7 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 21/116 (18%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  LL+   +AF L   + +D ++I D  +G+G++ L + +    F      ++  A EI
Sbjct: 222 EISLLMAEIVAFHL---KHKDNIKIYDPTSGSGSLLLNIGEVFQKFNKKKHSVTYYAQEI 278

Query: 137 AKS-------NAVTNGV------SERFDTLQSDW----FSSVEGL-FDVIVSNPPY 174
            +S       N + +GV      +   DTL+ DW     +S E L  D +VSNPPY
Sbjct: 279 NESTYKLTKMNLILHGVNVSEIHARNADTLKQDWPIDKINSTEPLRVDSVVSNPPY 334


>gi|322786157|gb|EFZ12762.1| hypothetical protein SINV_00682 [Solenopsis invicta]
          Length = 280

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++D +R+LDLG G GA  +A    +   K V  DIS  A      NA+ N V      ++
Sbjct: 134 RKDAIRMLDLGAGCGATAIAAKLMNGMCKIVANDISKVACVAIAMNAILNNVD-----IE 188

Query: 155 SDWFS----SVEGLFDVI-VSNPPY---IESVIVDCLGLEVRDFDPRISL-DGGIDGLS 204
             W +     +E L+DVI V +  Y   I + ++  LG E      RI L D G  GLS
Sbjct: 189 VSWENLLQKPLEDLYDVIFVGDLLYDEEIANTLMTWLG-EAHKRGARIYLGDPGRHGLS 246


>gi|289678355|ref|ZP_06499245.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. syringae FF5]
          Length = 207

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 51  LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 110

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 111 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 153


>gi|289648508|ref|ZP_06479851.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. 2250]
          Length = 398

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|260891098|ref|ZP_05902361.1| putative methyltransferase [Leptotrichia hofstadii F0254]
 gi|260859125|gb|EEX73625.1| putative methyltransferase [Leptotrichia hofstadii F0254]
          Length = 236

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           IL++G G G + L + +     + + V++     E  + N   N + ++   L  +   +
Sbjct: 67  ILEIGAGQGIMSLLISEIDMVERIIAVEVQKDVYETLEKNIEINNLRQKITPLNEN-IKN 125

Query: 161 VEGLFDVIVSNPPY 174
           +EG ++ I SNPPY
Sbjct: 126 IEGKYEFIFSNPPY 139


>gi|228984123|ref|ZP_04144309.1| Type I restriction-modification system, M subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228775651|gb|EEM24031.1| Type I restriction-modification system, M subunit [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 530

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L + K        K  G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRKYISHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303


>gi|261380921|ref|ZP_05985494.1| site-specific DNA-methyltransferase, HsdM subunit [Neisseria
           subflava NJ9703]
 gi|284796174|gb|EFC51521.1| site-specific DNA-methyltransferase, HsdM subunit [Neisseria
           subflava NJ9703]
          Length = 871

 Score = 37.7 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129
           E  LL+   +A     ++ R+ + I D  +G+G++ + +       LK +   K    ++
Sbjct: 193 EVSLLMSEIIA---DHLKDREEISIYDPTSGSGSLLINIGHSVAKHLKSADSIKYYAQEL 249

Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDWFSSVEGLF-DVIVSNPPY 174
                 + + N V  G+      +   DTL+ DW    E L+ D +VSNPPY
Sbjct: 250 KENTYNLTRMNLVMRGILPSNIFTRNADTLEDDWPLEGEPLYLDAVVSNPPY 301


>gi|225076051|ref|ZP_03719250.1| hypothetical protein NEIFLAOT_01083 [Neisseria flavescens
           NRL30031/H210]
 gi|224952611|gb|EEG33820.1| hypothetical protein NEIFLAOT_01083 [Neisseria flavescens
           NRL30031/H210]
          Length = 871

 Score = 37.7 bits (86), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129
           E  LL+   +A     ++ R+ + I D  +G+G++ + +       LK +   K    ++
Sbjct: 193 EVSLLMSEIIA---DHLKDREEISIYDPTSGSGSLLINIGHSVAKHLKSADSIKYYAQEL 249

Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDWFSSVEGLF-DVIVSNPPY 174
                 + + N V  G+      +   DTL+ DW    E L+ D +VSNPPY
Sbjct: 250 KENTYNLTRMNLVMRGILPSNIFTRNADTLEDDWPLEGEPLYLDAVVSNPPY 301


>gi|222100803|ref|YP_002535371.1| Menaquinone biosynthesis methyltransferase ubiE [Thermotoga
           neapolitana DSM 4359]
 gi|221573193|gb|ACM24005.1| Menaquinone biosynthesis methyltransferase ubiE [Thermotoga
           neapolitana DSM 4359]
          Length = 223

 Score = 37.7 bits (86), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           ++LDL TGTG V   L +++P  +  G+D+S + +EIAK  
Sbjct: 41  KVLDLATGTGDVIKLLKEKAPHLEVTGLDLSLEMMEIAKKK 81


>gi|301163521|emb|CBW23072.1| putative RNA methyltransferase [Bacteroides fragilis 638R]
          Length = 472

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 17/115 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A++L ++  RD         + DL TGTG +   + +++   K +
Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGDELVYDLYTGTGTIANFVSRQAR--KVI 351

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405


>gi|302802849|ref|XP_002983178.1| hypothetical protein SELMODRAFT_117965 [Selaginella moellendorffii]
 gi|300148863|gb|EFJ15520.1| hypothetical protein SELMODRAFT_117965 [Selaginella moellendorffii]
          Length = 188

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 8/79 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTL----- 153
            ILD GTG+G + +A LK       VGVDI   A+  + SNA  N +    F+       
Sbjct: 62  NILDYGTGSGILAIAALKMG-ASHAVGVDIDPMAVSSSASNATLNALDPHAFEVFIAAAD 120

Query: 154 -QSDWFSSVEGLFDVIVSN 171
            + D      G+FDV+V+N
Sbjct: 121 DKDDPVPHGPGVFDVVVAN 139


>gi|71736452|ref|YP_276895.1| hypothetical protein PSPPH_4795 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557005|gb|AAZ36216.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320326358|gb|EFW82411.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331651|gb|EFW87589.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 398

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|94984726|ref|YP_604090.1| hypothetical protein Dgeo_0619 [Deinococcus geothermalis DSM 11300]
 gi|94555007|gb|ABF44921.1| SAM-dependent methyltransferase [Deinococcus geothermalis DSM
           11300]
          Length = 403

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)

Query: 125 VGVDISCKALEIAKSNAVTN-GVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175
           V +DIS  AL  A+ N   N G+  R +T+Q+D   W S  +  FD+++ +PP +
Sbjct: 259 VSLDISAHALASAQRNFTLNPGLPARHETVQADVFRWLSQTDREFDLVILDPPSL 313


>gi|330975613|gb|EGH75679.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 332

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|319938777|ref|ZP_08013141.1| DNA methyltransferase signature protein [Streptococcus anginosus
           1_2_62CV]
 gi|319811827|gb|EFW08093.1| DNA methyltransferase signature protein [Streptococcus anginosus
           1_2_62CV]
          Length = 248

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS L    P + KR +  I+DL  G GAV L     +   + + V+I  +  ++A+ + 
Sbjct: 33  VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGLFASTRTK-AQIIAVEIQERLADMAERSI 89

Query: 142 VTNGVSERFDTLQSD---WFSSVEG-LFDVIVSNPPYIE 176
             NG++ +   +Q D       ++G   D+I+ NPPY +
Sbjct: 90  ELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFK 128


>gi|317179168|dbj|BAJ56956.1| Type I restriction enzyme M protein [Helicobacter pylori F30]
          Length = 543

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L++ K N + N 
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S   +G  D IVSNPP+
Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315


>gi|312198563|ref|YP_004018624.1| methyltransferase type 11 [Frankia sp. EuI1c]
 gi|311229899|gb|ADP82754.1| Methyltransferase type 11 [Frankia sp. EuI1c]
          Length = 531

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 11/108 (10%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFF 122
           RL   S   EP   TE  + S        +  R   R LD+G G G V + L  +  P  
Sbjct: 269 RLAAQSRVLEP--GTEAFLTS--------LGVRPGWRCLDVGCGHGQVSILLAGRVRPGG 318

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + VG+D S  +L +A+ NA   G    +    + W     G FD+  S
Sbjct: 319 QVVGIDASPASLAVARHNATRVGARIAWMNADASWLPVARGGFDLAYS 366


>gi|258623082|ref|ZP_05718095.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM573]
 gi|258584695|gb|EEW09431.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM573]
          Length = 340

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +P  +    DIS  A+  ++   + N +  R     SD  S
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNPNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMLS 260

Query: 160 SVEGLFDVIVSNPPY 174
             +  +D IV+NPP+
Sbjct: 261 DTKHKYDYIVTNPPF 275


>gi|238917477|ref|YP_002930994.1| hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750]
 gi|238872837|gb|ACR72547.1| Hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750]
          Length = 470

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 10/78 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSE-RF---DTLQS 155
           I DL TGTG +   L   SP   K +GV+I  +A+E AK NA  NG++   F   D L++
Sbjct: 330 IYDLYTGTGTIAQML---SPVASKVIGVEIVAEAVEAAKKNAAQNGLTNCEFIADDVLKA 386

Query: 156 DWFSSVEGLFDVIVSNPP 173
               ++E   D IV +PP
Sbjct: 387 --LDNIEIKPDFIVLDPP 402


>gi|237802338|ref|ZP_04590799.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025195|gb|EGI05251.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 398

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 249 VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAGEERFDVIVADPPAFIK--- 305

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 306 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 343


>gi|228994625|ref|ZP_04154449.1| Type I restriction-modification system, M subunit [Bacillus
           pseudomycoides DSM 12442]
 gi|228765110|gb|EEM13840.1| Type I restriction-modification system, M subunit [Bacillus
           pseudomycoides DSM 12442]
          Length = 517

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K ++  + D   G+G++ L + KE+  +   G +       +A+ N + + +  +RFD  
Sbjct: 224 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 283

Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174
            +D     + L   F+ IV+NPPY
Sbjct: 284 NADTLEEPQHLDKRFEAIVANPPY 307


>gi|209964877|ref|YP_002297792.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           centenum SW]
 gi|209958343|gb|ACI98979.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           centenum SW]
          Length = 427

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L + +   +  GV +S + L IA+  A   G+S+R     +D + 
Sbjct: 193 RVLDIGCGWGGLALHLARAAD-VEVTGVTLSQEQLAIARRRAEEAGLSDRVRFELAD-YR 250

Query: 160 SVEGLFDVIVS 170
            ++G FD IVS
Sbjct: 251 RLKGRFDRIVS 261


>gi|113866085|ref|YP_724574.1| SAM-dependent methyltransferase [Ralstonia eutropha H16]
 gi|113524861|emb|CAJ91206.1| SAM-dependent methyltransferase [Ralstonia eutropha H16]
          Length = 296

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 9/97 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKA 133
           RP    LVD+        + K     +LD+G GTG+  +AL ++     +  G+DIS   
Sbjct: 38  RPLEGRLVDT--------VGKTSAQHVLDVGCGTGSTTIALARKLGAQGRCTGIDISEPM 89

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L  A++ A  NG +  F    +  ++     FD IVS
Sbjct: 90  LAAARARAQHNGSTASFIRADAQDYAFAPASFDSIVS 126


>gi|325087789|gb|EGC41099.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           capsulatus H88]
          Length = 343

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+
Sbjct: 168 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELAR 207


>gi|315045007|ref|XP_003171879.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma
           gypseum CBS 118893]
 gi|311344222|gb|EFR03425.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma
           gypseum CBS 118893]
          Length = 370

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 36/177 (20%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSL 90
           RQR  L + + +    + +  ILG + F  + +        PR +TE      +    + 
Sbjct: 56  RQR--LQSLVCQRAAGKPLQYILGDQPFGELTILCREGVLIPRLDTESYTTRIAQRLLAE 113

Query: 91  PRIEKRDVVRILDLGTGTGAVCL---ALLKES-PFFKGVGVDISCKALEIAKSN---AVT 143
            R      +RI+D+ TGTG + L   +LL  S P    +GVDIS  AL +AK N    + 
Sbjct: 114 NRHNPTRSLRIIDICTGTGCIPLLLHSLLAPSIPTLSIIGVDISSTALSLAKKNLEYNIG 173

Query: 144 NGV-------------------------SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           NG                               TL S          D+++SNPPYI
Sbjct: 174 NGSLLSRARDEVRFVHADILDPCSLKPDGSELGTLLSRSGQDHSDRLDLLISNPPYI 230


>gi|302557272|ref|ZP_07309614.1| methyltransferase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302474890|gb|EFL37983.1| methyltransferase domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 303

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D G+G G +     +  P  + V VD S   LE A+  A   G ++RFDT+  +   S
Sbjct: 63  IVDAGSGPGVIACLFAETFPGARVVAVDASGPLLERARDRAGRQGAADRFDTVTGE-LPS 121

Query: 161 VEGLFD 166
           V G  D
Sbjct: 122 VLGELD 127


>gi|256822586|ref|YP_003146549.1| type 12 methyltransferase [Kangiella koreensis DSM 16069]
 gi|256796125|gb|ACV26781.1| Methyltransferase type 12 [Kangiella koreensis DSM 16069]
          Length = 260

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 30/134 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           R+LDL  G G   ++L K   +  G+GVD+    ++ AK +A++  V  + + ++   +D
Sbjct: 56  RVLDLCCGKGVTLISLAKHYGW-HGIGVDVVEDFIQQAKIDAISQRVKSQAEFVRQNMAD 114

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +      LFDVIV           D LG  V   D                     +S+H
Sbjct: 115 FLKQNTELFDVIVF------PACTDVLGDRVESLDI--------------------LSKH 148

Query: 217 LNKDGLCSVEIGYN 230
           +N DG   VE  Y 
Sbjct: 149 INDDGFILVESDYK 162


>gi|187779697|ref|ZP_02996170.1| hypothetical protein CLOSPO_03293 [Clostridium sporogenes ATCC
           15579]
 gi|187773322|gb|EDU37124.1| hypothetical protein CLOSPO_03293 [Clostridium sporogenes ATCC
           15579]
          Length = 704

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 36/200 (18%)

Query: 24  VDP------DSVLDDRQRF---FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
           VDP      + VLDD        L N  + S+  E IH+      F       + + F P
Sbjct: 142 VDPRINLSVEPVLDDNGEVKLPALENHTMGSIFEELIHK------FNEENNEQAGEHFTP 195

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-------ALLKESPFFKGV-- 125
           R   EL+ D      + +I K     + D   GTG +          L KE+     +  
Sbjct: 196 RHVVELMADITFLPVVDKI-KDGSYLVYDGACGTGGMLTIAEKRLQELAKENNKQISINL 254

Query: 126 -GVDISCKALEIAKSNAVTNGVSERFD------TLQSDWFSSVEGLFDVIVSNPPYIESV 178
            G +I+ +   I K++ +  G  ++ D      TL +D FS+    FD ++SNPPY +S 
Sbjct: 255 YGQEINPETYAITKADMLLKGEGKQADNIAYGSTLSNDKFSTTN--FDFMLSNPPYGKSW 312

Query: 179 IVDC--LGLEVRDFDPRISL 196
             D   LG +    DPR ++
Sbjct: 313 KTDLNKLGGKEHITDPRFAV 332


>gi|159026259|emb|CAO86408.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 219

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            R+LD+GTGT  + + + +  P ++ + +D++   LEI + N ++    E+    + D  
Sbjct: 43  ARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILSANCQEKIKLEKVDGK 102

Query: 158 ---FSSVEGLFDVIVSN 171
              + S +  FD+++SN
Sbjct: 103 NLPYQSEQ--FDLVISN 117


>gi|11497821|ref|NP_069043.1| hypothetical protein AF0205 [Archaeoglobus fulgidus DSM 4304]
 gi|2650438|gb|AAB91027.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 204

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           I+DLG GTG  A+  +LL        VGVD+  +AL+IA+ NA   GV   F   +   F
Sbjct: 49  IIDLGCGTGILAIACSLLGHY----SVGVDLDVEALKIARDNAAELGVEADFVRSEVSKF 104

Query: 159 SSVEGLFDVIVSNPPY 174
                +  V+  NPP+
Sbjct: 105 RCKRKVTTVM--NPPF 118


>gi|119501757|ref|XP_001267635.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181]
 gi|119415801|gb|EAW25738.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181]
          Length = 236

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+L+LGT TG   LA L E+    G   V VD+S K L+IA+     +G ++R   ++ D
Sbjct: 70  RVLELGTFTGVSALA-LHEATRQTGAEIVTVDLSEKYLKIAEDAFKRHGATDRIRVIKGD 128

Query: 157 WFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIA 210
                  +EG FD+I  +    E      L L+ +   PR +L   D  ++GL   R+I+
Sbjct: 129 CLKVLHELEGQFDLIYIDAEEDEYEAYIRLILDHKLLSPRGALIVDDTLLEGLVFDRSIS 188

Query: 211 DGVSRHLNKDGLC 223
                 + +  L 
Sbjct: 189 KNFPAEIQEPYLA 201


>gi|332531769|ref|ZP_08407654.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038745|gb|EGI75187.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 293

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K   
Sbjct: 122 PDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGA 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N
Sbjct: 182 E-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN 229


>gi|330951060|gb|EGH51320.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae Cit 7]
          Length = 198

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 42  LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 101

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 102 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 144


>gi|325095018|gb|EGC48328.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 505

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 59/218 (27%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIE 94
           L   + R  +   +  ILG + F  + +        PRPETE     V + L   L    
Sbjct: 88  LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147

Query: 95  KRDV-------------VRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137
           ++D+             +RI+DL TGTG + L L        P  +   VDIS +AL++A
Sbjct: 148 QKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRALKLA 207

Query: 138 KSN--------AVTNGVSERFDTLQSDWFSSVEGL------------------------- 164
           + N         ++    E    ++ D  S +  L                         
Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGDVLSGLSELSGLCSSSVTPASKTAAAAAAAAEPE 267

Query: 165 ----FDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196
                 +++SNPPYI             VR ++PR++L
Sbjct: 268 INPVITILLSNPPYISPAQFANGTTARSVRGYEPRLAL 305


>gi|312866463|ref|ZP_07726681.1| conserved hypothetical protein [Streptococcus downei F0415]
 gi|311098157|gb|EFQ56383.1| conserved hypothetical protein [Streptococcus downei F0415]
          Length = 384

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 13/64 (20%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +G DI  + +EIAK+NA+  G+++       R   L++D    + G   VIVSNPPY E 
Sbjct: 260 MGSDIDARMIEIAKNNALEAGLADVIKLKQMRLQDLKTD---KING---VIVSNPPYGER 313

Query: 178 VIVD 181
           ++ D
Sbjct: 314 LLDD 317


>gi|304388400|ref|ZP_07370509.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|304337612|gb|EFM03772.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ATCC 13091]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|229088748|ref|ZP_04220305.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-44]
 gi|228694573|gb|EEL47992.1| Type I restriction-modification system, M subunit [Bacillus cereus
           Rock3-44]
          Length = 512

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L   + +      K  G +++     +AK N + +GV +  
Sbjct: 196 EDKKLFSVFDPTMGSGSLMLNIRSYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 255

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 256 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 285


>gi|297582533|ref|YP_003698313.1| type I restriction-modification system, M subunit [Bacillus
           selenitireducens MLS10]
 gi|297140990|gb|ADH97747.1| type I restriction-modification system, M subunit [Bacillus
           selenitireducens MLS10]
          Length = 531

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           E +    + D   G+G++ L +   L      K  G +++     +AK N + +GV    
Sbjct: 215 EDKKWFSVFDPTMGSGSLMLNVRNYLNHPDKVKYHGQELNTTTFNLAKMNLILHGVDPEE 274

Query: 151 ------DTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD +V NPPY
Sbjct: 275 MRVRNGDTLNKDWPTDEPYTFDSVVMNPPY 304


>gi|313669084|ref|YP_004049368.1| ribosomal protein L11 methyltransferase [Neisseria lactamica
           ST-640]
 gi|313006546|emb|CBN88010.1| putative ribosomal protein L11 methyltransferase [Neisseria
           lactamica 020-06]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|282856081|ref|ZP_06265367.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455]
 gi|282586102|gb|EFB91384.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455]
          Length = 409

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           +LD  T TG+  L  ++         VD+S  ALE+A+ NA  NG   + D + +D F  
Sbjct: 237 VLDCFTHTGSFALNAVRGGAAHV-TAVDVSAGALEMARHNAALNGCLGKMDFIAADVFDL 295

Query: 159 -----SSVEGLFDVIVSNPP 173
                S   G + +I+ +PP
Sbjct: 296 LSDMASRGRGEYGMIILDPP 315


>gi|260775445|ref|ZP_05884342.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608626|gb|EEX34791.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 357

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+D+  A S          ++LD G G G +   +   +   K    DIS  A+E +
Sbjct: 207 SQLLLDTLPALS---------GKVLDFGCGAGVIGSVMATLNAEIKLEMCDISALAVESS 257

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K+    NG+  R     SD +S     +  I+SNPP+
Sbjct: 258 KATLEANGLKGR--VFASDIYSDTSQDYQFIISNPPF 292


>gi|257056628|ref|YP_003134460.1| ubiquinone/menaquinone biosynthesis methylase [Saccharomonospora
           viridis DSM 43017]
 gi|256586500|gb|ACU97633.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Saccharomonospora viridis DSM 43017]
          Length = 244

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LD G GTGA   ALL  +P  + V +D S + L  A+     + V  RF     +  
Sbjct: 55  LRLLDAGCGTGASTAALLAVAPRAEIVAIDASARMLAEARRKPWPDSV--RFVHTSVEEL 112

Query: 159 SSVEGLFDVIVS 170
           + V G FD I++
Sbjct: 113 AGVSGPFDGILA 124


>gi|229083613|ref|ZP_04215941.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44]
 gi|228699703|gb|EEL52360.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44]
          Length = 465

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 90/185 (48%), Gaps = 34/185 (18%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG-----------WR 58
           F+ R   L + + I++  +      +F    +IV+++  +  + I G             
Sbjct: 226 FITRTAELPNKEAIIEEIAT-----KFPEVKSIVQNVNTKRTNVIFGDTTTVLYGSEYIY 280

Query: 59  DFY-NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           DF  +++  +S+ +F +  PE T++L D AL ++  +++  + V  +D   G G++ L L
Sbjct: 281 DFIGDIKFAISARSFYQVNPEQTKVLYDKALEYA--KLDGNETV--IDAYCGIGSISLFL 336

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLF-DVI 168
            +++   K  GV+I  +A+E AK NA  N ++         + +  +W+   EG+  D I
Sbjct: 337 AQKAK--KVYGVEIVPEAIEDAKRNAELNNMTNAEFAVGEAEVVIPNWYK--EGIIADTI 392

Query: 169 VSNPP 173
           V +PP
Sbjct: 393 VVDPP 397


>gi|242824194|ref|XP_002488209.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218713130|gb|EED12555.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 361

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 43/186 (23%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV----DSAL-AFSLPRIEKRDVVRI 101
           K + +  ILG + F ++ +        PR ETE       D  L A S   + K   +RI
Sbjct: 78  KGKPLQYILGDQPFGDLDILCRKGVLIPRGETESFTFHTRDVILEAHSAKYLGKS--LRI 135

Query: 102 LDLGTGTGAVCLALLKESPF-FKG---VGVDISCKALEIAKSNAVTN------------- 144
           LDL +G+G + L L       FK    VGVD+  +A+ +++ N + N             
Sbjct: 136 LDLCSGSGCISLLLHSLLASHFKDLTIVGVDVDPRAISLSQKNKLHNIRRGLLSPRAQNE 195

Query: 145 --------------GVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGL---E 186
                         G     DTLQ  +  S+ +  +DV++SNPPYI +    C G     
Sbjct: 196 VCFLKADILDSIESGKRSFLDTLQPHFPGSNTQSTWDVLISNPPYISTSNF-CNGTTSRS 254

Query: 187 VRDFDP 192
           VR ++P
Sbjct: 255 VRKYEP 260


>gi|187736397|ref|YP_001878509.1| type I restriction-modification system, M subunit [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187426449|gb|ACD05728.1| type I restriction-modification system, M subunit [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 853

 Score = 37.7 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 31/171 (18%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  LL+   +A  L   + R  ++I D  +G+G++ + + K    + G G +I   A E+
Sbjct: 192 EVSLLMSEIVAAHL---KDRQQIKIYDPTSGSGSLLINIGKCVARYMGGGDNIKYYAQEL 248

Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174
            ++       N V  G      V+   DTL+ DW         ++ + L+ D +VSNPPY
Sbjct: 249 KENTYNLTRMNLVMRGILPNNIVTRNGDTLEEDWPYFDDNDPVNTYDPLYVDAVVSNPPY 308

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +S          ++ DPR        G + Y  +   +  HL  DG+ ++
Sbjct: 309 SQS-----WNPADKESDPRYRFGLAPKGKADYAFLLHDL-YHLKPDGIMTI 353


>gi|158422529|ref|YP_001523821.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571]
 gi|158329418|dbj|BAF86903.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571]
          Length = 235

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DLG G G   LA+L          V++      +A+ NA  NG+S+R   +++D  +
Sbjct: 28  RIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAIVEADVRT 87

Query: 160 ---------SVEGLFDVIVSNPPY 174
                          D++++NPP+
Sbjct: 88  LGKPAGPAEPAAQAADLVIANPPF 111


>gi|126434842|ref|YP_001070533.1| N-6 DNA methylase [Mycobacterium sp. JLS]
 gi|126234642|gb|ABN98042.1| N-6 DNA methylase [Mycobacterium sp. JLS]
          Length = 316

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 13/128 (10%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLA-- 114
           R F       + D F PR    L+VD         + K   VR I D   GTG +     
Sbjct: 161 RKFAESNNAQAGDHFTPREVIALMVDILFHAQDDALTKPGTVRTIYDPAAGTGGMLSTAH 220

Query: 115 --LLKESPFFKGV--GVDISCKALEIAKSNAVTNG--VSERF--DTLQSDWFSSVEGLFD 166
             L++ +P  + V  G DI+ ++  + KS+ +  G  V   +  DTL  D F +    FD
Sbjct: 221 DHLIEMNPKARPVLYGQDINPRSYAMCKSDMIVKGQDVDNIYLGDTLTDDGFRT--KTFD 278

Query: 167 VIVSNPPY 174
            ++SNPP+
Sbjct: 279 FLLSNPPF 286


>gi|325201498|gb|ADY96952.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240149]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDGLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|325953669|ref|YP_004237329.1| rRNA (guanine-N(2)-)-methyltransferase [Weeksella virosa DSM 16922]
 gi|323436287|gb|ADX66751.1| rRNA (guanine-N(2)-)-methyltransferase [Weeksella virosa DSM 16922]
          Length = 383

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 119 SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV-IVSNPPYIE 176
            PF +K VG D S   ++IA+ N ++  + +  +    D+F+S + LF V +V NPPY E
Sbjct: 250 KPFDYKIVGYDNSPMMVKIAEQNIISADLVDLIEVKHQDFFTSRKELFPVLLVFNPPYDE 309

Query: 177 ------SVIVDCLGLEVRDFDP 192
                  +    +G +++ F P
Sbjct: 310 RIENDNQIFYKQIGDQLKKFYP 331


>gi|290476530|ref|YP_003469435.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004]
 gi|289175868|emb|CBJ82671.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004]
          Length = 337

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+  G G +   L K++P       D++  A   +K+    N +    + + S+ +S+
Sbjct: 200 LLDIACGAGVLAAVLGKKNPELTLTLSDVNAAATISSKATLKANKLEG--NVITSNVYSA 257

Query: 161 VEGLFDVIVSNPPY 174
           +E  FD I+SNPP+
Sbjct: 258 IEEKFDWIISNPPF 271


>gi|282852112|ref|ZP_06261470.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           224-1]
 gi|282556872|gb|EFB62476.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           224-1]
          Length = 226

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+GTG+G + +A  K       +G DIS +A+  AK N   N V+   +  +++  
Sbjct: 90  MSVLDIGTGSGILAIAASKLGASHV-LGTDISDEAVTAAKENIALNDVN-NINVRKANLL 147

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             ++  +D+IV+N      ++ D L   + D D  ++ +G +
Sbjct: 148 KDIDDKYDLIVAN------ILADILLELIPDLDSHLNKEGKV 183


>gi|239981073|ref|ZP_04703597.1| transferase [Streptomyces albus J1074]
 gi|291452940|ref|ZP_06592330.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074]
 gi|291355889|gb|EFE82791.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074]
          Length = 481

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 53/123 (43%), Gaps = 15/123 (12%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G    AL       +    D++ +AL         +G  E  + L+   F  V
Sbjct: 139 LDLGTGSG--IQALHASVDATRVTATDLNPRALSFTALTLALSGAPE-AELLEGSLFEPV 195

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +G  +D+IVSNPP+   VI     L  R        DGG+ G    RT+       LN+ 
Sbjct: 196 DGNRYDLIVSNPPF---VISPGARLTYR--------DGGMSGDDLCRTLVQQAGDRLNEG 244

Query: 221 GLC 223
           G  
Sbjct: 245 GYA 247


>gi|229512706|ref|ZP_04402174.1| type I restriction-modification system DNA-methyltransferase
           subunit M [Vibrio cholerae TMA 21]
 gi|229350216|gb|EEO15168.1| type I restriction-modification system DNA-methyltransferase
           subunit M [Vibrio cholerae TMA 21]
          Length = 523

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNA 141
           S L   L  ++  ++  + D   G+G++ L + KE+  P  K  G + +     +A+ N 
Sbjct: 209 SKLLAKLVTLDNPNIKSVYDPTCGSGSLLLRVAKEANNPDIKYYGQERNPSTYNLARMNM 268

Query: 142 VTNGVS-ERFDTLQSDWFSSVEGL---FDVIVSNPPY 174
           + + V  +RFD    D   + + L   FD +V+NPP+
Sbjct: 269 IMHDVHYKRFDIENDDTLEAPQHLDLRFDAVVANPPF 305


>gi|269124815|ref|YP_003298185.1| type 11 methyltransferase [Thermomonospora curvata DSM 43183]
 gi|268309773|gb|ACY96147.1| Methyltransferase type 11 [Thermomonospora curvata DSM 43183]
          Length = 356

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 36/78 (46%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           RI   D  RI D+G G G   LAL +  P     G+D    ++E A+ +A   G+  R  
Sbjct: 170 RINGADRPRIADVGCGQGWSSLALARAFPNAWVDGIDADAASIEDARRHAAEAGLDGRLR 229

Query: 152 TLQSDWFSSVEGLFDVIV 169
               D     +G +D+IV
Sbjct: 230 FRCEDAAELADGPYDLIV 247


>gi|206972576|ref|ZP_03233519.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|229067799|ref|ZP_04201117.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185]
 gi|229176635|ref|ZP_04304040.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W]
 gi|206732478|gb|EDZ49657.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228606802|gb|EEK64218.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W]
 gi|228715283|gb|EEL67141.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG   V L L   S   KG   GV+I  +  ++   +   NG+ ER   +  D  
Sbjct: 48  LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104

Query: 159 SSVEGL----FDVIVSNPPYIES 177
              E L    +DV+  NPPY ++
Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127


>gi|330902934|gb|EGH33877.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 177

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 30/113 (26%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP-YIESVI 179
           VD S  AL+  + NA  NG +E+   ++ D F +++ L      FDVIV++PP +I+   
Sbjct: 44  VDASSFALDGVERNAALNGFAEKMTCIEGDVFEALKELKAAEERFDVIVADPPAFIK--- 100

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEI 227
                   R  D +       +G   YR + +   R L+KDG+     CS+ +
Sbjct: 101 --------RKKDMK-------NGEGAYRRLNEQAMRLLSKDGILVSASCSMHL 138


>gi|312867208|ref|ZP_07727418.1| RNA methyltransferase, RsmD family [Streptococcus parasanguinis
           F0405]
 gi|311097337|gb|EFQ55571.1| RNA methyltransferase, RsmD family [Streptococcus parasanguinis
           F0405]
          Length = 179

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LDL  G+G + +  +      + V V+   +A EI  +N       ERF  L+ +   
Sbjct: 44  RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 102

Query: 158 -FSSVEGLFDVIVSNPPYIESVIV 180
            F  + G FD++  +PPY +  IV
Sbjct: 103 AFGLLTGTFDLVFLDPPYAKEEIV 126


>gi|237731814|ref|ZP_04562295.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226907353|gb|EEH93271.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 270

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 21/115 (18%)

Query: 59  DFYNVRLTLSSDTFEPRPE------------TELLVDSALAFSLPRIEKRDVVRILDLGT 106
           D Y  +L L++ T E +PE               L DS L   L +I+ +    + D+G 
Sbjct: 10  DLYRKQLQLANRT-EKKPEHWDKRAEKMAENCASLTDSYLLQLLGKIDLKGAESLFDMGC 68

Query: 107 GTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNA-----VTNGVSERFDTL 153
           G G V LAL K+ P   GV      +S  A   A+ NA     V     E +D L
Sbjct: 69  GPGTVSLALAKKMPIIYGVDYSQGMLSVAARRAAQMNARHVQWVQRAWEEHWDDL 123


>gi|240147095|ref|ZP_04745696.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
 gi|257200743|gb|EEU99027.1| conserved hypothetical protein [Roseburia intestinalis L1-82]
          Length = 498

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A+  SL +   ++  +ILD   G G + +      P  +  G+DI   A+E A+ NA  
Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGPAIEGARENASL 395

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173
            G  E+ + +  D+F    + LFD I++N P
Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424


>gi|255936501|ref|XP_002559277.1| Pc13g08520 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583897|emb|CAP91921.1| Pc13g08520 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 290

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 96  RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           R+   ++DLG+G G  V LA  K  P  K +GVD++   LE+A+ NA   G S
Sbjct: 67  REGETVIDLGSGGGIDVLLAAKKVGPRGKAIGVDMTKSMLELARKNAEKAGAS 119


>gi|134045299|ref|YP_001096785.1| hypothetical protein MmarC5_0254 [Methanococcus maripaludis C5]
 gi|132662924|gb|ABO34570.1| protein of unknown function DUF890 [Methanococcus maripaludis C5]
          Length = 264

 Score = 37.7 bits (86), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 11/89 (12%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151
           EK D+  +L++GTG+G + + + K   +F+      D     L+IA+ N   N ++ + +
Sbjct: 83  EKEDIKEVLEIGTGSGIISILIAK---YFECNVTATDTVFDYLKIAEENISKNNLNSKIN 139

Query: 152 TLQS------DWFSSVEGLFDVIVSNPPY 174
            + S      D        FD+I+S PPY
Sbjct: 140 LVDSKGKIIFDIPELKNKKFDLIISYPPY 168


>gi|302189124|ref|ZP_07265797.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. syringae 642]
          Length = 332

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|239827791|ref|YP_002950415.1| MCP methyltransferase, CheR-type [Geobacillus sp. WCH70]
 gi|298351891|sp|C5D4V7|Y2453_GEOSW RecName: Full=Putative methyltransferase GWCH70_2453
 gi|239808084|gb|ACS25149.1| MCP methyltransferase, CheR-type [Geobacillus sp. WCH70]
          Length = 247

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L +  ++   RILD+G GTG + + L KE   F   GVD+S   L IA++ A    V+  
Sbjct: 30  LKQYGRQGAKRILDVGCGTGELAVRLAKEG--FLVTGVDLSENMLAIAQAKAEAQQVTIE 87

Query: 150 F 150
           F
Sbjct: 88  F 88


>gi|241205537|ref|YP_002976633.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240859427|gb|ACS57094.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 292

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +  R V   LDLGTG+G + +A+  L+  P       DI   A ++A  N   NG++   
Sbjct: 147 VRSRLVRNALDLGTGSGVLAIAVRKLRNIPVL---ATDIDPIATKVAAENVRRNGIASGI 203

Query: 151 DTLQSDWFSSV----EGLFDVIVSN 171
            T  +  F S     +G FD+I++N
Sbjct: 204 VTRTAPGFHSTAFSEQGPFDLIIAN 228


>gi|148238697|ref|YP_001224084.1| glycine-sarcosine methyltransferase [Synechococcus sp. WH 7803]
 gi|147847236|emb|CAK22787.1| Glycine-sarcosine methyltransferase [Synechococcus sp. WH 7803]
          Length = 302

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 68/159 (42%), Gaps = 23/159 (14%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +T   SH     P +  DD QRF  T   VR   H     I  + D ++ RL      ++
Sbjct: 23  MTSTKSH-----PSANPDDAQRFGETPESVRETDHYQQEYIEQFADRWD-RLI----DWQ 72

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            R E E        F +  + +     +LD+ TGTG   + LL+E   F+ V VD S   
Sbjct: 73  AREEAEG------DFFVKLLREHGAKSVLDVATGTGFHSVRLLREG--FEVVSVDGSPNM 124

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIV 169
           L  A  NA +  +  R  T+ +DW      + G +D ++
Sbjct: 125 LARAFKNARSRDLLMR--TVHADWRFLNRDIHGEYDAVI 161


>gi|83645197|ref|YP_433632.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase
           [Hahella chejuensis KCTC 2396]
 gi|83633240|gb|ABC29207.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase
           [Hahella chejuensis KCTC 2396]
          Length = 244

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 82  VDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +DSA+    P IEK     R   R+LD G G G +   + + S  +K +GVD+S   +  
Sbjct: 26  MDSAVRDRFPAIEKVWGGLRRPHRVLDFGCGNGVLSYWMYQNSFAYKVLGVDVSKTGVRN 85

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           A       G+  R  T   +      G FD +VS+
Sbjct: 86  AHREFAQPGLDYRVITSPMN--VRQLGAFDAVVSS 118


>gi|30018306|ref|NP_829937.1| methyltransferase [Bacillus cereus ATCC 14579]
 gi|218232737|ref|YP_002364884.1| hypothetical protein BCB4264_A0039 [Bacillus cereus B4264]
 gi|228956476|ref|ZP_04118273.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229039939|ref|ZP_04189704.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676]
 gi|229107721|ref|ZP_04237358.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15]
 gi|229125552|ref|ZP_04254585.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4]
 gi|229142840|ref|ZP_04271283.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24]
 gi|229148444|ref|ZP_04276701.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550]
 gi|229188320|ref|ZP_04315369.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876]
 gi|296500867|ref|YP_003662567.1| methyltransferase [Bacillus thuringiensis BMB171]
 gi|29893846|gb|AAP07138.1| Methyltransferase [Bacillus cereus ATCC 14579]
 gi|218160694|gb|ACK60686.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|228595119|gb|EEK52889.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876]
 gi|228634986|gb|EEK91558.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550]
 gi|228640603|gb|EEK96990.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24]
 gi|228657869|gb|EEL13674.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4]
 gi|228675694|gb|EEL30901.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15]
 gi|228727398|gb|EEL78590.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676]
 gi|228803166|gb|EEM49987.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|296321919|gb|ADH04847.1| methyltransferase [Bacillus thuringiensis BMB171]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG   V L L   S   KG   GV+I  +  ++   +   NG+ ER   +  D  
Sbjct: 48  LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104

Query: 159 SSVEGL----FDVIVSNPPYIES 177
              E L    +DV+  NPPY ++
Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127


>gi|329295748|ref|ZP_08253084.1| ribosomal protein L11 methyltransferase [Plautia stali symbiont]
          Length = 293

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210


>gi|310794663|gb|EFQ30124.1| methyltransferase domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 346

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG   +    E P    +GVD+S       +SN V    S + D ++ DW  
Sbjct: 107 RVLDVGTGTGIWAMDYADEHPEASVIGVDLS-----PIQSNYVPPNCSFQIDDIEEDWTW 161

Query: 160 S 160
           S
Sbjct: 162 S 162


>gi|303247595|ref|ZP_07333866.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ]
 gi|302491075|gb|EFL50969.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ]
          Length = 286

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWF 158
           R LDLGTG+G + + L K      GVG+DI  +A+  A  N   N V E     +     
Sbjct: 154 RFLDLGTGSGILGIGLAKLG--LTGVGLDIDPQAVWCAAENLRLNAVDEAMSLAVGGVGA 211

Query: 159 SSVEGLFDVIVSN 171
            S E +FD++ +N
Sbjct: 212 VSPEAVFDIVAAN 224


>gi|296333297|ref|ZP_06875750.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675198|ref|YP_003866870.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149495|gb|EFG90391.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413442|gb|ADM38561.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 311

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPRI 93
            W+ +Y+         +  + + + P    EL++  D  +AF             +L RI
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERI 172

Query: 94  -EKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +K D  +++D+GTG+G  ++  A+L+          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
              Q++    +EG  DVIV+N
Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248


>gi|240015800|ref|ZP_04722340.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA6140]
 gi|240114890|ref|ZP_04728952.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|260441294|ref|ZP_05795110.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|268600547|ref|ZP_06134714.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|268584678|gb|EEZ49354.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|239787602|emb|CAX84070.1| Ribosomal protein L11 methyltransferase [uncultured bacterium]
          Length = 283

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 29/139 (20%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLV---DSALAFS----------LPRIE---- 94
           W++ Y+      RL +     EP    E LV   D  +AF           L  +E    
Sbjct: 88  WKESYHPLPVGQRLLVVPSWLEPPESGERLVLRMDPEMAFGSGAHATTRGCLELLEEVAG 147

Query: 95  KRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ + R+LDLGTG+G  A+  A+L        V  D+   A+E A+ NA  NGV+ R   
Sbjct: 148 QKGLGRVLDLGTGSGVLAIWAAMLGADGV---VATDLDPVAVETAERNARLNGVAGRVTV 204

Query: 153 LQSDWFSSVEGLFDVIVSN 171
           ++S    +  G +  IV+N
Sbjct: 205 VESALVPA--GRYRTIVAN 221


>gi|229176526|ref|ZP_04303955.1| Type I restriction-modification system, M subunit [Bacillus cereus
           MM3]
 gi|228606963|gb|EEK64356.1| Type I restriction-modification system, M subunit [Bacillus cereus
           MM3]
          Length = 530

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +   +      K  G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303


>gi|91201823|emb|CAJ74883.1| strongly similar to glycine-sarcosine-dimethylglycine
           methyltransferase [Candidatus Kuenenia stuttgartiensis]
          Length = 280

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  + +R   +ILD+ TGTG   + LLK    F+ V  D S + L  A +    +G  
Sbjct: 57  FFIEELRRRGARKILDVATGTGFHSIRLLKAG--FEVVSADGSPEMLAKAFATGREHGFI 114

Query: 148 ERFDTLQSDW---FSSVEGLFDVIV 169
            R  T+Q+DW      V G FD ++
Sbjct: 115 LR--TVQADWRWLNRDVHGKFDAVI 137


>gi|152978325|ref|YP_001343954.1| ribosomal protein L11 methyltransferase [Actinobacillus
           succinogenes 130Z]
 gi|171704236|sp|A6VM22|PRMA_ACTSZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|150840048|gb|ABR74019.1| ribosomal protein L11 methyltransferase [Actinobacillus
           succinogenes 130Z]
          Length = 293

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       +G+DI  +A+  + SNA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASGSNAQANGVADRLQLFLSD-RQP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 ADLKADVVVAN 230


>gi|330969342|gb|EGH69408.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 332

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|315221974|ref|ZP_07863885.1| RNA methyltransferase, RsmD family [Streptococcus anginosus F0211]
 gi|315188940|gb|EFU22644.1| RNA methyltransferase, RsmD family [Streptococcus anginosus F0211]
          Length = 214

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G++ +  +        V V+   +A  I   N +     ERF+ L+ +   
Sbjct: 79  RVLDLYAGSGSLAIEAISRG-MASAVLVEKDRRAQTIISQNIIMTKEKERFELLKMESNR 137

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E +  D   L  R+            D  + L   I GL 
Sbjct: 138 ALELVTGQFDLVLLDPPYAKEQIAADIEKLVERELLSDDVLVVCETDKSVDLPEEIAGLG 197

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 198 IWKQKIYGISK 208


>gi|282850456|ref|ZP_06259835.1| type I restriction-modification system, M subunit [Veillonella
           parvula ATCC 17745]
 gi|282579949|gb|EFB85353.1| type I restriction-modification system, M subunit [Veillonella
           parvula ATCC 17745]
          Length = 533

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 32/155 (20%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESP---------FFKGVGVDISCKALEIAKSNAVTNG 145
           + D   + D   G+G++ L +  E P         F+   G +++     +A+ N + +G
Sbjct: 225 QNDTFTVYDPTMGSGSLLLTVRNELPDGSRQGAVSFY---GQELNTVTYNLARMNLMMHG 281

Query: 146 VS------ERFDTLQSDWFSSVE--GL-----FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           V+         DTL+SDW    +  G+     FD +V+NPPY  S   D    +++  DP
Sbjct: 282 VTYNNMTLNNADTLESDWPDGPDRDGIDRPRSFDAVVANPPY--SAKWDNSESKLK--DP 337

Query: 193 RISLDGGIDGLSH--YRTIADGVSRHLNKDGLCSV 225
           R S  G +   S   Y  I   +  HLN +G  ++
Sbjct: 338 RFSDYGKLAPASKADYAFILHSL-YHLNNEGTMAI 371


>gi|240013355|ref|ZP_04720268.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI18]
 gi|240079937|ref|ZP_04724480.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|240112144|ref|ZP_04726634.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|240117094|ref|ZP_04731156.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|240120428|ref|ZP_04733390.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID24-1]
 gi|240122730|ref|ZP_04735686.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|240124921|ref|ZP_04737807.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268596077|ref|ZP_06130244.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268598202|ref|ZP_06132369.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268602780|ref|ZP_06136947.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268681329|ref|ZP_06148191.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268683500|ref|ZP_06150362.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268549865|gb|EEZ44884.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268582333|gb|EEZ47009.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268586911|gb|EEZ51587.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268621613|gb|EEZ54013.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268623784|gb|EEZ56184.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDSLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|291301387|ref|YP_003512665.1| methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
 gi|290570607|gb|ADD43572.1| Methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
          Length = 243

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 10/99 (10%)

Query: 93  IEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +E    VR  +LD+G G G   L L      ++  GVDIS  ALE A+  A   GV   F
Sbjct: 49  VEAAGQVRGTVLDVGCGLGENALFLAGRG--YRVTGVDISPTALEQARQRAADKGVEVDF 106

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
               +   + ++  FD +      I+S +  CL  E+R+
Sbjct: 107 VVGDATRLAGLDARFDTV------IDSALFHCLKPELRN 139


>gi|228918985|ref|ZP_04082365.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840634|gb|EEM85895.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG   V L L   S   KG   GV+I  +  ++   +   NG+ ER   +  D  
Sbjct: 48  LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104

Query: 159 SSVEGL----FDVIVSNPPYIES 177
              E L    +DV+  NPPY ++
Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127


>gi|16272916|ref|NP_439141.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae Rd
           KW20]
 gi|1172623|sp|P44402|PRMA_HAEIN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|1574006|gb|AAC22638.1| ribosomal protein L11 methyltransferase (prmA) [Haemophilus
           influenzae Rd KW20]
          Length = 296

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 163 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDEKPS 221

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 222 -DLKADVVVAN 231


>gi|116624370|ref|YP_826526.1| type 11 methyltransferase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227532|gb|ABJ86241.1| Methyltransferase type 11 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LPR  +R    +LDLG G G +   L K   F   + +DIS   L IA++      +  
Sbjct: 52  NLPRRRRR----VLDLGCGAGLLAQELSKH--FDSVLAIDISEPMLAIARAKRSAPNIEY 105

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           R     +  F   EG FD +VS+  +    I D  G   R F P ++  G
Sbjct: 106 RLADASTAEF---EGEFDAVVSHTTFHH--IADVAGTITR-FKPMLARQG 149


>gi|323337190|gb|EGA78444.1| YIL064W-like protein [Saccharomyces cerevisiae Vin13]
          Length = 240

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 53  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 107

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 108 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 160

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 161 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 212

Query: 247 VNAFK 251
               K
Sbjct: 213 WKTIK 217


>gi|308374659|ref|ZP_07436882.2| hypothetical protein TMFG_03572 [Mycobacterium tuberculosis
           SUMu006]
 gi|308377091|ref|ZP_07441107.2| hypothetical protein TMHG_01874 [Mycobacterium tuberculosis
           SUMu008]
 gi|308341169|gb|EFP30020.1| hypothetical protein TMFG_03572 [Mycobacterium tuberculosis
           SUMu006]
 gi|308348924|gb|EFP37775.1| hypothetical protein TMHG_01874 [Mycobacterium tuberculosis
           SUMu008]
          Length = 225

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD GTG G    A+   +  +   G+D S  A+E A+ NA   GVS  F    +     
Sbjct: 29  VLDPGTGPGH--HAIYYAAKGYAATGIDGSVAAIERARDNARKAGVSVNFQVGDATTLDG 86

Query: 161 VEGLFDVIV 169
           ++G FD +V
Sbjct: 87  LDGRFDTVV 95


>gi|308180830|ref|YP_003924958.1| methyltransferase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308046321|gb|ADN98864.1| methyltransferase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 252

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 7/100 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSN 140
           +D+ L     ++ K    +I+DL  GTGAV L A  K         V+I  +  E+A+ +
Sbjct: 33  LDAVLLGDFAQVAKGAKSQIVDLCAGTGAVGLFASAKTQGHI--TAVEIQPRLAEMAQRS 90

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
            + N ++++   L  D  +    L     D ++ NPPY +
Sbjct: 91  VILNDLTQQMTVLNEDLLAITHQLPKDSVDTVLCNPPYFK 130


>gi|296392459|ref|YP_003657343.1| cyclopropane-fatty-acyl-phospholipid synthase [Segniliparus
           rotundus DSM 44985]
 gi|296179606|gb|ADG96512.1| Cyclopropane-fatty-acyl-phospholipid synthase [Segniliparus
           rotundus DSM 44985]
          Length = 428

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 23/123 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL------------GTG 107
           F +  +  SS  FE  P T+          LP  ++R V R+LDL            GTG
Sbjct: 167 FLDETMVYSSALFEQLPATQ--------DELPEAQRRKVDRLLDLAGVRAGSRVLEIGTG 218

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G +CL   +     +   V +SC+  E+A       G +++      D + SV+G +D 
Sbjct: 219 WGELCLRAAQRGATVR--SVTLSCEQRELALDRVRRAGFADQVAVDLCD-YRSVDGQYDC 275

Query: 168 IVS 170
           +VS
Sbjct: 276 VVS 278


>gi|260583905|ref|ZP_05851653.1| methyltransferase [Granulicatella elegans ATCC 700633]
 gi|260158531|gb|EEW93599.1| methyltransferase [Granulicatella elegans ATCC 700633]
          Length = 381

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQ-SDWFSSVEGLFDVIVSNPPY 174
           +G DI    +EIAK NA+  GVSE   F  +Q  D+ +  E    V+V+NPPY
Sbjct: 256 LGADIDGSMIEIAKQNAIKAGVSEHIEFKQMQLKDFRTKKEN--GVLVANPPY 306


>gi|209551793|ref|YP_002283710.1| methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537549|gb|ACI57484.1| Methyltransferase type 11 [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 286

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           ++R+LDL  GTG   + L       +G   DIS   + +A+S+A   G+  RF       
Sbjct: 55  LIRVLDLACGTGRHAMELAVRGYVVEGS--DISSGMVAVARSSAAERGLDVRFHECSFQT 112

Query: 158 FSSVEGLFDVIVS 170
             +++G FDV+++
Sbjct: 113 ADAIQGSFDVVLA 125


>gi|9392585|gb|AAF87202.1| glycine-sarcosine methyltransferase [Halorhodospira halochloris]
          Length = 268

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 45/174 (25%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  ++KR   RILD  TGTG   + LL+    F  V  D S + L  A  N    G  
Sbjct: 50  FFIQELKKRGATRILDAATGTGFHSVRLLEAG--FDVVSADGSAEMLAKAFENGRKRGHI 107

Query: 148 ERFDTLQSDW---FSSVEGLFDVIVS-------------------------NPPYIESVI 179
            R  T+Q DW      + G +D I+                          NP   E V+
Sbjct: 108 LR--TVQVDWRWLNRDIHGRYDAIICLGNSFTHLFNEKDRRKTLAEFYSALNP---EGVL 162

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYN 230
           +    L+ R++D    LD G D    Y    +GVS    H++ DGL   +  +N
Sbjct: 163 I----LDQRNYDG--ILDHGYDSSHSYYYCGEGVSVYPEHVD-DGLARFKYEFN 209


>gi|114561846|ref|YP_749359.1| methyltransferase small [Shewanella frigidimarina NCIMB 400]
 gi|122300753|sp|Q087P4|TRMN6_SHEFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|114333139|gb|ABI70521.1| methyltransferase small [Shewanella frigidimarina NCIMB 400]
          Length = 251

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 28/95 (29%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+G G+G + L   + SP    +       A+EI   NA       +F+  QS W  
Sbjct: 37  HILDIGAGSGLLSLMAAQRSPHHTSI------IAVEI--DNAAAKAC--QFNIKQSPWSE 86

Query: 160 SV------------------EGLFDVIVSNPPYIE 176
           +V                  E LFD I+ NPPY E
Sbjct: 87  TVQLFHGAIQDFQQRHNNNDEPLFDHIICNPPYFE 121


>gi|302785964|ref|XP_002974754.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii]
 gi|300157649|gb|EFJ24274.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii]
          Length = 261

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 69  SDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFF 122
           +D +EP  ++  LVD+ LA    L  ++ +     +++G G+G V     L L  E    
Sbjct: 12  ADVYEPCDDSFALVDALLADRSHLAELQPK---LCMEIGCGSGYVISSLALMLRDEVESS 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
           + V  DI+  A E        +GVS   D +++D  S +E    G  D++V NPPY+ +
Sbjct: 69  QYVATDINQAATETTLETLKAHGVSA--DVVRTDLVSGLERRLAGSVDLLVFNPPYVPT 125


>gi|240281637|gb|EER45140.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           capsulatus H143]
          Length = 271

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+
Sbjct: 37  ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSSKSIELAR 76


>gi|228950583|ref|ZP_04112718.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228809058|gb|EEM55542.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDL TG   V L L   S   KG   GV+I  +  ++   +   NG+ ER   +  D  
Sbjct: 48  LLDLCTGNAVVPLLL---STRTKGNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLK 104

Query: 159 SSVEGL----FDVIVSNPPYIES 177
              E L    +DV+  NPPY ++
Sbjct: 105 DMPEKLGRHQYDVVTCNPPYFQT 127


>gi|225556777|gb|EEH05065.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 344

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 4/41 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F G   VGVD S K++E+A+
Sbjct: 172 ILDLGTGNGSM-LALLRDEGGFTGGQMVGVDYSPKSIELAR 211


>gi|163842198|ref|YP_001626603.1| cyclopropane-fatty-acyl-phospholipid synthase [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955674|gb|ABY25189.1| cyclopropane-fatty-acyl-phospholipid synthase [Renibacterium
           salmoninarum ATCC 33209]
          Length = 406

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +R+LD+G G G++ + L   +  F  + VGV IS +    A+  A   GVSE+ +    D
Sbjct: 196 MRVLDIGCGWGSLSIEL---AELFDVQMVGVTISVEQRAFAQERARQRGVSEQVEIRLQD 252

Query: 157 WFSSVEGLFDVIVS 170
           +     G FD +VS
Sbjct: 253 YREITGGPFDAVVS 266


>gi|115695312|ref|XP_001199139.1| PREDICTED: similar to MGC80481 protein [Strongylocentrotus
            purpuratus]
 gi|115740951|ref|XP_791145.2| PREDICTED: similar to MGC80481 protein [Strongylocentrotus
            purpuratus]
          Length = 1449

 Score = 37.7 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 17   LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            +++ +V+ +   V DD Q+        R  K+ S H I G     N         F  R 
Sbjct: 1206 VNAEEVVREKGEVKDDDQKSKPKAKQRRQRKYTSKHDIAGGSKHLNKYWAQRYRLFS-RF 1264

Query: 77   ETELLVDSALAFSLP--RIEKRDVVR-----ILD--LGTGTGAVCLALLKESPFFKGVGV 127
            +  + +D    +S+   RI +    R     I+D   G+G  A+  A   E    + V V
Sbjct: 1265 DEGIKLDEEGWYSVTPERIAEHQAERCRCDLIVDAFCGSGGNAIQFAFTCE----RVVAV 1320

Query: 128  DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
            DI    +E+A+ NA   GV +R + +  D+F   + L  DV+  +PP+
Sbjct: 1321 DIDPAKIELARHNATVYGVEDRIEFIVGDFFKVADYLKADVVFLSPPW 1368


>gi|254495215|ref|ZP_05108139.1| methyltransferase [Polaribacter sp. MED152]
 gi|85819567|gb|EAQ40724.1| methyltransferase [Polaribacter sp. MED152]
          Length = 222

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +V  ILD+G+GTG + L + + S  F    V+I   A E    N   +   +R     
Sbjct: 17  KDEVDSILDIGSGTGILGLMMAQRSEAFTIDAVEIDEAAYEQTVENFEGSDWGDRLFCYH 76

Query: 155 SDWFS------SVEGLFDVIVSNPPY 174
           S++          E  +D+++SNPP+
Sbjct: 77  SNFIDFADEIVEEEESYDLVISNPPF 102


>gi|317180666|dbj|BAJ58452.1| Type I restriction enzyme M protein [Helicobacter pylori F32]
          Length = 543

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTNSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315


>gi|297379660|gb|ADI34547.1| type I restriction enzyme M protein [Helicobacter pylori v225d]
          Length = 543

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTKSVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECKGKMDYIVSNPPF 315


>gi|229129743|ref|ZP_04258710.1| Type I restriction-modification system, M subunit [Bacillus cereus
           BDRD-Cer4]
 gi|228653659|gb|EEL09530.1| Type I restriction-modification system, M subunit [Bacillus cereus
           BDRD-Cer4]
          Length = 512

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +   +      K  G +++     +AK N + +GV +  
Sbjct: 196 EDKKLFSVFDPTMGSGSLMLNIQNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 255

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 256 MRLRNGDTLNKDWPTDEPYTFDSVLMNPPY 285


>gi|224046260|ref|XP_002197924.1| PREDICTED: trimethylguanosine synthase homolog [Taeniopygia
           guttata]
          Length = 892

 Score = 37.7 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  AL  +    + + +DI  + L +A+ NA   GV+E  D L  D+ +   GL
Sbjct: 741 GVGGNAIQFALTSK----RVIAIDIDPEKLRLARHNAEVYGVAEHIDFLCGDFMALAAGL 796

Query: 165 -FDVIVSNPPY 174
             DV+  +PP+
Sbjct: 797 CADVVFLSPPW 807


>gi|224367261|ref|YP_002601424.1| UbiE2 [Desulfobacterium autotrophicum HRM2]
 gi|223689977|gb|ACN13260.1| UbiE2 [Desulfobacterium autotrophicum HRM2]
          Length = 213

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +  FY++ + + S  +      + LVDSA      ++EK+   R+LD+ +GTG+V LA  
Sbjct: 15  FAHFYDLFIKMHSHNYGEETR-KFLVDSA------QLEKKRHPRVLDICSGTGSVVLAFS 67

Query: 117 KESPFFKGVGVDISCKALEIAKSN 140
           +  P    VG D +   L  AK  
Sbjct: 68  RSLPDSTAVGYDFALGMLYKAKEK 91


>gi|220910017|ref|YP_002485328.1| RNA methylase [Cyanothece sp. PCC 7425]
 gi|219866628|gb|ACL46967.1| putative RNA methylase [Cyanothece sp. PCC 7425]
          Length = 224

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P    +V++ L  +  ++ K D+  + DLG+G G + +   ++    +GVG+DI  + +E
Sbjct: 71  PTPPEVVEAMLEVA--KVGKDDI--LYDLGSGDGRIVITAAQKF-GTRGVGIDIDPQRVE 125

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            A  NA   GV++R   +Q D F +
Sbjct: 126 EANQNAKEAGVTDRVKFIQQDIFKA 150


>gi|297582376|ref|YP_003698156.1| methyltransferase small [Bacillus selenitireducens MLS10]
 gi|297140833|gb|ADH97590.1| methyltransferase small [Bacillus selenitireducens MLS10]
          Length = 241

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RI+DL +GTGAV L ++ E        ++I    + +++     NGVSER      D   
Sbjct: 43  RIIDLCSGTGAVPL-VMSERTNAAIDAIEIQEALVTMSRKTMAINGVSERVTIHHGDVSD 101

Query: 160 SVE----GLFDVIVSNPPYIE 176
           +        FD++  NPPY +
Sbjct: 102 AGAVVPWNRFDLVTCNPPYFK 122


>gi|15673633|ref|NP_267807.1| hypothetical protein L100263 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724662|gb|AAK05749.1|AE006395_9 hypothetical protein L100263 [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 384

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 8/74 (10%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPY-----IESV 178
           G DI  K +EIAK NA+  G+S+  ++  ++   F + + L  V+VSNPPY     +E  
Sbjct: 265 GFDIDGKMIEIAKHNALAAGLSDVIKYKQMRLQDFRT-DKLDGVLVSNPPYGVRLEVEEA 323

Query: 179 IVDCLGLEVRDFDP 192
           +    G   + F P
Sbjct: 324 VAALYGEMGKTFAP 337


>gi|46105458|ref|XP_380533.1| hypothetical protein FG00357.1 [Gibberella zeae PH-1]
          Length = 254

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 34/199 (17%)

Query: 72  FEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--- 124
           +EP  ++ LL+D+  + S    L          ++++GTG+G V   +   +    G   
Sbjct: 16  YEPAEDSYLLLDTLSSASETEYLQNAFPDAAPLVVEVGTGSGVVLAFVHAHAQKLFGTRQ 75

Query: 125 ---VGVDISCKALEIAKSNAVTNGVSERFDTLQS-------DWFSSV-EGLFDVIVSNPP 173
               GVD++  A   A    V    S+  DT  S       D  +S+ EG  DV++ NPP
Sbjct: 76  VLTAGVDMNAFACR-ATVGTVAKAESDNPDTHASYLGSCMGDLTTSMREGAIDVLIFNPP 134

Query: 174 YI---------ESVIVDCLGLEVR-DFDP-----RISLDGGIDGLSHYRTIADGVSRHLN 218
           Y+         ++ + D LG+  +  FD       +S  GG+DG+     + + + R L+
Sbjct: 135 YVPTPEMPARPDTFVADDLGVTSKTSFDDDSYLLALSYAGGVDGMETTDRLIEALPRTLS 194

Query: 219 KDGLCSVEIGYNQKVDVVR 237
           + G   + +    K D V+
Sbjct: 195 RRGCAYLLLCAQNKPDQVK 213


>gi|311695156|gb|ADP98029.1| rRNA (guanine-N2-)-methyltransferase, RsmD [marine bacterium HP15]
          Length = 385

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 38/80 (47%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G G + LA L E    + V  D+S +A+  A+ N        +      D   S
Sbjct: 246 VLDLACGNGVLGLAALSERRDLQLVFSDVSSQAVLSARRNVEKAFPDAKAAFSHRDGIES 305

Query: 161 VEGLFDVIVSNPPYIESVIV 180
             G FD+I+ NPP+ E  +V
Sbjct: 306 DLGAFDLILLNPPFHEGGVV 325


>gi|307319122|ref|ZP_07598552.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
 gi|306895229|gb|EFN25985.1| Methyltransferase type 11 [Sinorhizobium meliloti AK83]
          Length = 261

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           R+LD+G G G       + +P  + +GVDIS + LE A   +   G+ +  F+   + + 
Sbjct: 31  RVLDIGCGAGQTTREAARAAPQGEAIGVDISAEMLEEASRRSAAEGLRNAMFEQGDAQFH 90

Query: 159 SSVEGLFDVIVS 170
               G FD+ +S
Sbjct: 91  GFPTGGFDLCIS 102


>gi|257880781|ref|ZP_05660434.1| type I restriction-modification system methyltransferase subunit
           [Enterococcus faecium 1,230,933]
 gi|257891263|ref|ZP_05670916.1| type I restriction-modification system methyltransferase subunit
           [Enterococcus faecium 1,231,410]
 gi|257815009|gb|EEV43767.1| type I restriction-modification system methyltransferase subunit
           [Enterococcus faecium 1,230,933]
 gi|257827623|gb|EEV54249.1| type I restriction-modification system methyltransferase subunit
           [Enterococcus faecium 1,231,410]
          Length = 540

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 23/139 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES------PFFKGV 125
           + P+P  +L+    L       E +    + D   G+G++ L   K S       +F   
Sbjct: 201 YTPQPVAKLMTQIVLQGK----EDKKGFSVYDATMGSGSLLLNAKKYSHQPGTISYF--- 253

Query: 126 GVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           G +++     +A+ N + +GV          DTL  DW +     FD ++ NPPY     
Sbjct: 254 GQELNTSTYNLARMNMILHGVPIANQHLHNADTLDQDWPTEEPTNFDGVLMNPPYSAKWS 313

Query: 180 VDCLGLEVRDFDPRISLDG 198
            D   L+    DPR S  G
Sbjct: 314 ADKGFLD----DPRFSAYG 328


>gi|190894546|ref|YP_001984839.1| putative methyltransferase [Rhizobium etli CIAT 652]
 gi|190700207|gb|ACE94289.1| putative methyltransferase protein [Rhizobium etli CIAT 652]
          Length = 259

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LD+G G G       + +P  + VGVD+  + LE+A+  +   G+    F+   + + 
Sbjct: 31  RVLDIGCGAGQTTREAARAAPQGEAVGVDVLAEMLEVARQRSAAEGLRNVVFEQADAQFH 90

Query: 159 SSVEGLFDVIVS 170
           + +   FD+ +S
Sbjct: 91  AFLPASFDLCIS 102


>gi|151943099|gb|EDN61434.1| conserved protein [Saccharomyces cerevisiae YJM789]
          Length = 257

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILKKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|83769909|dbj|BAE60044.1| unnamed protein product [Aspergillus oryzae]
          Length = 402

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F+G  VGVD S +++E+A+
Sbjct: 175 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 213


>gi|320528569|ref|ZP_08029726.1| type I restriction-modification system, M subunit [Solobacterium
           moorei F0204]
 gi|320131155|gb|EFW23728.1| type I restriction-modification system, M subunit [Solobacterium
           moorei F0204]
          Length = 521

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           S L   L  + K  +  + D   G+G++ L + KE+      G +       +A+ N + 
Sbjct: 213 SKLLAKLVTVGKSKLKNVYDPTCGSGSLLLRVAKETDVVSFYGQEKVSTTYNLARMNMLL 272

Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +GV       E  DTL+      ++  FD +V+NPPY
Sbjct: 273 HGVPFNHFDIENNDTLEHPNEEHMKMRFDAVVANPPY 309


>gi|291536635|emb|CBL09747.1| Putative RNA methylase family UPF0020 [Roseburia intestinalis
           M50/1]
          Length = 498

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A+  SL +   ++  +ILD   G G + +      P  +  G+DI   A+E A+ NA  
Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGPAIEGARENASL 395

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173
            G  E+ + +  D+F    + LFD I++N P
Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424


>gi|260580069|ref|ZP_05847899.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           RdAW]
 gi|260093353|gb|EEW77286.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           RdAW]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|229015568|ref|ZP_04172563.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH1273]
 gi|228745715|gb|EEL95722.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH1273]
          Length = 497

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K ++  + D   G+G++ L + KE+  +   G +       +A+ N + + +  +RFD  
Sbjct: 204 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 263

Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174
            +D     + L   F+ IV+NPPY
Sbjct: 264 NADTLEEPQHLDKRFEAIVANPPY 287


>gi|209527308|ref|ZP_03275817.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209492234|gb|EDZ92580.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 442

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           ILD G G+G   LAL   +P  K VG+DIS K++E ++     +G+ +  F  +  +   
Sbjct: 62  ILDAGCGSGYKALALALANPGAKIVGIDISEKSVEASRDRLKYHGIENAEFHAMYIEELP 121

Query: 160 SVEGLFDVI 168
           S+   FD I
Sbjct: 122 SLGWEFDYI 130


>gi|315230888|ref|YP_004071324.1| TrmA-like RNA methyltransferase [Thermococcus barophilus MP]
 gi|315183916|gb|ADT84101.1| TrmA-like RNA methyltransferase [Thermococcus barophilus MP]
          Length = 420

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDL +G G   + L K    FK  GV+ +  A+E+A  NA  NGV   F   +++   
Sbjct: 283 KILDLYSGLGTFGIWLAKRG--FKVEGVEANPFAVEMANKNAKLNGVDAVFRLGKAE--E 338

Query: 160 SVEGLFDVIVSNPP 173
           +  G +D  V +PP
Sbjct: 339 TAIGDYDTAVVDPP 352


>gi|169794820|ref|YP_001712613.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii AYE]
 gi|215482367|ref|YP_002324549.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB307-0294]
 gi|301345439|ref|ZP_07226180.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB056]
 gi|301510342|ref|ZP_07235579.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB058]
 gi|301595020|ref|ZP_07240028.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB059]
 gi|226712932|sp|B7GWT8|RSMC_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712981|sp|B0V4Z1|RSMC_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169147747|emb|CAM85610.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii AYE]
 gi|213987470|gb|ACJ57769.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB307-0294]
          Length = 337

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KIEKIKPLESWLKTYTVQVNGQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|90581289|ref|ZP_01237086.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14]
 gi|90437528|gb|EAS62722.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14]
          Length = 294

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 26/131 (19%)

Query: 74  PRP-ETELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P    +L+D  LAF           L  ++ +D+    ++D G G+G + +A LK   
Sbjct: 123 PEPGAVNVLLDPGLAFGTGTHPTTSLCLEWLDSQDLTGKTVIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN-------- 171
             K +G+DI  +A+  ++ NA  NGVS+  +  L  D    ++   DV+V+N        
Sbjct: 182 AAKVIGIDIDPQAILASRDNAERNGVSDNLELYLPQDQPQGIQA--DVVVANILAGPLRE 239

Query: 172 -PPYIESVIVD 181
             P I+S++ D
Sbjct: 240 LSPVIKSLVKD 250


>gi|302760487|ref|XP_002963666.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii]
 gi|300168934|gb|EFJ35537.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii]
          Length = 262

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 69  SDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFF 122
           +D +EP  ++  LVD+ LA    L  ++ +     +++G G+G V     L L  E    
Sbjct: 12  ADVYEPCDDSFALVDALLADRSHLAELQPK---LCMEIGCGSGYVISSLALMLRDEVESS 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
           + V  DI+  A E        +GVS   D +++D  S +E    G  D++V NPPY+ +
Sbjct: 69  QYVATDINQAATETTLETLKAHGVSA--DVVRTDLVSGLERRLAGSVDLLVFNPPYVPT 125


>gi|255024124|ref|ZP_05296110.1| hypothetical protein LmonocyFSL_12983 [Listeria monocytogenes FSL
           J1-208]
          Length = 299

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +G DI  + +EIAK NAV  G+ +   F  LQ   F + E  + V+V+NPPY
Sbjct: 248 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-EDKYGVVVANPPY 298


>gi|229021766|ref|ZP_04178344.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH1272]
 gi|228739513|gb|EEL89931.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH1272]
          Length = 402

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K ++  + D   G+G++ L + KE+  +   G +       +A+ N + + +  +RFD  
Sbjct: 109 KTEIKDVYDGTCGSGSLLLRVGKEAKVYNYYGQEKVSTTYNLARMNMLLHDIPYQRFDIK 168

Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174
            +D     + L   F+ IV+NPPY
Sbjct: 169 NADTLEEPQHLDKRFEAIVANPPY 192


>gi|15644141|ref|NP_229190.1| ubiquinone/menaquinone biosynthesis methyltransferase-related
           protein [Thermotoga maritima MSB8]
 gi|4981950|gb|AAD36459.1|AE001791_21 ubiquinone/menaquinone biosynthesis methyltransferase-related
           protein [Thermotoga maritima MSB8]
          Length = 248

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++  W +FY+ R+  + D+    P+ +L   L+ S L   L     ++  R+LDLG GTG
Sbjct: 2   KLRSW-EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTG 54

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDV 167
              L L +    F+ V VD S + LE+A+   V N V  + + L   S  F +V  L DV
Sbjct: 55  KWSLFLQERG--FEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDV 112

Query: 168 I 168
           +
Sbjct: 113 L 113


>gi|121996838|ref|YP_001001625.1| 23S rRNA 5-methyluridine methyltransferase [Halorhodospira
           halophila SL1]
 gi|121588243|gb|ABM60823.1| 23S rRNA m(5)U-1939 methyltransferase [Halorhodospira halophila
           SL1]
          Length = 434

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 9/96 (9%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V+ AL +  P+  +R    ILDL  G G   L L +E     G+  D   + +E A+ N
Sbjct: 277 MVERALEWLQPQSGRR----ILDLFCGVGNFTLPLAREGATVTGIEGDP--RLVERAEEN 330

Query: 141 AVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173
           A  NG+   F   D    +    V G FD ++ +PP
Sbjct: 331 AAANGLHADFAVADLATEEGTRRVAGGFDAVLLDPP 366


>gi|323348128|gb|EGA82382.1| YIL064W-like protein [Saccharomyces cerevisiae Lalvin QA23]
          Length = 249

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 62  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 116

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 117 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 169

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 170 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 221

Query: 247 VNAFK 251
               K
Sbjct: 222 WKTIK 226


>gi|237725460|ref|ZP_04555941.1| RNA methyltransferase [Bacteroides sp. D4]
 gi|229436147|gb|EEO46224.1| RNA methyltransferase [Bacteroides dorei 5_1_36/D4]
          Length = 473

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 83  DSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +S  A++L ++  R+  R      + DL TGTG +   + +++   K +G++   +A+E 
Sbjct: 306 NSGQAYNLYKV-ARNFARLTGNELVYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIED 362

Query: 137 AKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           AK N+  NG+           D L  + F S  G  DVI+++PP
Sbjct: 363 AKVNSAINGIDNTLFYAGDMKDILTQE-FISQHGRPDVIITDPP 405


>gi|170759978|ref|YP_001785391.1| hypothetical protein CLK_3237 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406967|gb|ACA55378.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174
             N + E+   ++ D         +E + DV+  NPPY
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126


>gi|168181163|ref|ZP_02615827.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226947286|ref|YP_002802377.1| hypothetical protein CLM_0103 [Clostridium botulinum A2 str. Kyoto]
 gi|182667993|gb|EDT79972.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226844213|gb|ACO86879.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174
             N + E+   ++ D         +E + DV+  NPPY
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126


>gi|163755043|ref|ZP_02162164.1| hypothetical protein KAOT1_03477 [Kordia algicida OT-1]
 gi|161325110|gb|EDP96438.1| hypothetical protein KAOT1_03477 [Kordia algicida OT-1]
          Length = 470

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+E AK NA  N ++           + 
Sbjct: 326 VYDLYTGTGTIAQFVSKKAK--KVIGVESVPEAIEAAKENAAFNNITNTEFFVGDMKKVF 383

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +  F    G  DVI+++PP
Sbjct: 384 NAEFIETHGTPDVIITDPP 402


>gi|15605998|ref|NP_213375.1| hypothetical protein aq_533 [Aquifex aeolicus VF5]
 gi|2983178|gb|AAC06779.1| hypothetical protein aq_533 [Aquifex aeolicus VF5]
          Length = 380

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWF 158
           R+LDL   +G   +         K VGVDI+ +A+E+A+ NA  N V   F    + D+ 
Sbjct: 213 RVLDLFCYSGGFSVYCANRGA--KVVGVDINKRAVELARENAKLNSVKADFVLGNAFDFI 270

Query: 159 SSVEGLFDVIVSNPPYI 175
              +  +D+I+++PP I
Sbjct: 271 QESKEEWDLIIADPPAI 287


>gi|145628085|ref|ZP_01783886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145630071|ref|ZP_01785853.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145632363|ref|ZP_01788098.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           3655]
 gi|145634154|ref|ZP_01789865.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|145638200|ref|ZP_01793810.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittII]
 gi|148826374|ref|YP_001291127.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|148828153|ref|YP_001292906.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|229843963|ref|ZP_04464104.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|229846036|ref|ZP_04466148.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|260581943|ref|ZP_05849739.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           NT127]
 gi|166223416|sp|A5UD93|PRMA_HAEIE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223417|sp|A5UIB7|PRMA_HAEIG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|144979860|gb|EDJ89519.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|144984352|gb|EDJ91775.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|144987270|gb|EDJ93800.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           3655]
 gi|145268598|gb|EDK08591.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|145272529|gb|EDK12436.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittII]
 gi|148716534|gb|ABQ98744.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|148719395|gb|ABR00523.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|229811040|gb|EEP46757.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|229812957|gb|EEP48645.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|260095136|gb|EEW79028.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           NT127]
 gi|301169703|emb|CBW29304.1| methylase for 50S ribosomal subunit protein L11 [Haemophilus
           influenzae 10810]
 gi|309751356|gb|ADO81340.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R2866]
 gi|309973522|gb|ADO96723.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R2846]
          Length = 295

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|331085068|ref|ZP_08334155.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408768|gb|EGG88233.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 189

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 64  RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           RL L + D  + RP T+ + ++      P +      R LDL  G+G + +  L      
Sbjct: 10  RLQLKTLDGLDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIEALSRGAG- 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174
           + V V+ + KA+   K N     + ER  T+ +D  +++      G FD I  +PPY
Sbjct: 66  EAVFVEQNPKAMACIKENLKKTKLEERAVTMATDVMTALRRMEGSGTFDYIFMDPPY 122


>gi|218674489|ref|ZP_03524158.1| ribosomal protein L11 methyltransferase [Rhizobium etli GR56]
          Length = 288

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++    T  +  F 
Sbjct: 152 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIATRTAPGFH 208

Query: 160 SV----EGLFDVIVSN 171
           S      G FD+I++N
Sbjct: 209 STAFSEHGPFDLIIAN 224


>gi|218281999|ref|ZP_03488311.1| hypothetical protein EUBIFOR_00880 [Eubacterium biforme DSM 3989]
 gi|218216986|gb|EEC90524.1| hypothetical protein EUBIFOR_00880 [Eubacterium biforme DSM 3989]
          Length = 521

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           S L   L  + K  +  + D   G+G++ L + KE+      G +       +A+ N + 
Sbjct: 213 SKLLAKLVTVGKSKLKNVYDPTCGSGSLLLRVAKETDVVSFYGQEKVSTTYNLARMNMLL 272

Query: 144 NGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +GV       E  DTL+      ++  FD +V+NPPY
Sbjct: 273 HGVPFNHFDIENNDTLEHPNEEHMKMRFDAVVANPPY 309


>gi|207092295|ref|ZP_03240082.1| type I restriction enzyme M protein [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 543

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L + K N + N 
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S   +G  D IVSNPP+
Sbjct: 280 LTHSLKNAIEGNTLTNPYHSKDYKGKMDYIVSNPPF 315


>gi|71033081|ref|XP_766182.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68353139|gb|EAN33899.1| hypothetical protein TP01_0661 [Theileria parva]
          Length = 627

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+ +R++D  +G G   +  +    F   +GV+++ K +EI K N ++ GV   +D +  
Sbjct: 279 RNDIRVIDAFSGIGGNLIPFINN--FNYSLGVELNKKRVEICKDNILSYGVKNPYDLIHD 336

Query: 156 DWFS 159
           D+F+
Sbjct: 337 DFFN 340


>gi|315023819|gb|EFT36821.1| Mannose-1-phosphate guanylyltransferase (GDP) [Riemerella
           anatipestifer RA-YM]
          Length = 351

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           P  E + +D   +E  D    I  D G   L  + ++ D   ++  ++ + S  I  YN 
Sbjct: 233 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 292

Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263
           K +V+R+ ES KL +++  +DY     ++ LL C
Sbjct: 293 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 326


>gi|301107107|ref|XP_002902636.1| trans-aconitate 2-methyltransferase, putative [Phytophthora
           infestans T30-4]
 gi|262098510|gb|EEY56562.1| trans-aconitate 2-methyltransferase, putative [Phytophthora
           infestans T30-4]
          Length = 285

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 42/99 (42%), Gaps = 10/99 (10%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP  ELL   A     P  +  D V I+DLG GTG +  +  K  P      VD S   L
Sbjct: 26  RPALELL---ARVSDFPTTDD-DSVEIIDLGAGTGNMAPSFQKRWPSAHVTFVDSSTSML 81

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           E+A+     N      +TL +  F+ V+  F+      P
Sbjct: 82  EVAQQEHDEN------ETLNTQGFAYVQADFETYAPERP 114


>gi|257869714|ref|ZP_05649367.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803878|gb|EEV32700.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 244

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS+ F         +D+ L  + P I KR   RI+DL  G GAV L + +++  
Sbjct: 15  DIKIIQSSEVFS------FSLDAVLLANFPTIPKRG--RIVDLCAGNGAVGLFISRKTSA 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
                +++  +  ++A+ +   NG+ E+      D    F+ ++    D++V NPPY ++
Sbjct: 67  HI-YQIELQDRLADMAQRSVSLNGLEEQITVYPMDLKNIFTKIKPDSVDLLVCNPPYFKN 125

Query: 178 V 178
           V
Sbjct: 126 V 126


>gi|228475400|ref|ZP_04060119.1| type I restriction-modification system, M subunit [Staphylococcus
           hominis SK119]
 gi|228270583|gb|EEK12015.1| type I restriction-modification system, M subunit [Staphylococcus
           hominis SK119]
          Length = 518

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 12/114 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           + K+D+  + D   G+G++ L + +E+   +  G + +     +A+ N + + V+     
Sbjct: 219 VNKKDIKSVYDPTCGSGSLLLRVGREANVRQYYGQEYNSTTYNLARMNMLLHDVNYANFK 278

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            E  DT++    S  +  F+ +V+NPPY      D   LE    DPR S  G +
Sbjct: 279 IENGDTIEDPAIS--DERFEAVVANPPYSAKWSSDPQFLE----DPRFSNYGKL 326


>gi|226365254|ref|YP_002783037.1| hypothetical protein ROP_58450 [Rhodococcus opacus B4]
 gi|226243744|dbj|BAH54092.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 261

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 28/50 (56%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +LD+G G G+V L +    P    VGVD S + +E A+S AV +G    F
Sbjct: 35  VLDVGCGDGSVTLRIADRLPRGSVVGVDASPRMIEKARSRAVPDGARAEF 84


>gi|221195076|ref|ZP_03568132.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Atopobium rimae ATCC
           49626]
 gi|221184979|gb|EEE17370.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Atopobium rimae ATCC
           49626]
          Length = 452

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +RILD   GTG + +   KE+       + +GVD     + +AK NA  N VS RF    
Sbjct: 288 LRILDAYCGTGTIGICAAKEAGSRGIPVELIGVDQVENNIAMAKRNARANAVSARFVCDD 347

Query: 155 SDWFSSVE----GLFDVIVSNPP 173
           +  F + E      +DV+V +PP
Sbjct: 348 ATRFIAQEAKRGAPYDVVVLDPP 370


>gi|160893394|ref|ZP_02074180.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50]
 gi|156864969|gb|EDO58400.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50]
          Length = 251

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%)

Query: 102 LDLGTGTGAVCLALLKESP---FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           +DLGTGTG + + L  + P     + VG++I     E+A  +   N + ++      D  
Sbjct: 49  MDLGTGTGVIPILLAAKEPPDGTCQFVGLEIQDACAEMAGKSVRLNDLEQKVRIDHGDIR 108

Query: 158 ---FSSVEGLFDVIVSNPPYI 175
               +  +  FD++ SNPPYI
Sbjct: 109 EVSCNYRKASFDIVTSNPPYI 129


>gi|28211797|ref|NP_782741.1| methyltransferase, putative 3-demethylubiquinone-9
           3-methyltransferase [Clostridium tetani E88]
 gi|28204239|gb|AAO36678.1| methyltransferase, putative 3-demethylubiquinone-9
           3-methyltransferase [Clostridium tetani E88]
          Length = 207

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           + +++  +   ILD+G GTG++   LL E    K  G+DIS + L +AK
Sbjct: 40  IKKLKNLNFNTILDVGCGTGSILFLLLYEKENIKAYGLDISEEMLNVAK 88


>gi|332852274|ref|ZP_08434079.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013150]
 gi|332870497|ref|ZP_08439261.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013113]
 gi|332729404|gb|EGJ60744.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013150]
 gi|332732234|gb|EGJ63502.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013113]
          Length = 339

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 144 KIEKIKPLESWLKTYTVQVNGQELTICALPGVFSQTHLDVGTAVLLPYLNQVKSGRIADF 203

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL+  +     NG+ S++         +    
Sbjct: 204 GCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGIGSDQLRLQPVTGIADAPT 263

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 264 ELDAIVSNPPFHQGI 278


>gi|288941779|ref|YP_003444019.1| hypothetical protein Alvin_2065 [Allochromatium vinosum DSM 180]
 gi|288897151|gb|ADC62987.1| protein of unknown function Met10 [Allochromatium vinosum DSM 180]
          Length = 398

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           VD S  ALE  +SNA  NG+S R   LQ D F  +  L      FD ++ +PP
Sbjct: 249 VDASADALERLQSNAERNGLSARVRPLQGDAFEVLRQLRDQGRRFDTVLLDPP 301


>gi|167042719|gb|ABZ07439.1| hypothetical protein ALOHA_HF4000ANIW133O4ctg2g17 [uncultured
           marine crenarchaeote HF4000_ANIW133O4]
          Length = 180

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 29/135 (21%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++++ P  +T  L D         I+       LD+GTG+G   LA L E  F   VG D
Sbjct: 8   AESYPPSEDTFFLAD--------YIKNEKGESALDIGTGSGY--LAALLEKSFSLVVGTD 57

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S   L+  K            D L           FD+++ N PY+++        E+ 
Sbjct: 58  LSFNVLKKQKYFTTNTVCCNGADALNQQ--------FDLVICNMPYLKTD-------EIL 102

Query: 189 DFDPRISLDGGIDGL 203
           D    IS DGG DGL
Sbjct: 103 D----ISTDGGRDGL 113


>gi|190406281|gb|EDV09548.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|207344319|gb|EDZ71503.1| YIL064Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259147194|emb|CAY80447.1| EC1118_1I12_1255p [Saccharomyces cerevisiae EC1118]
 gi|323333162|gb|EGA74562.1| YIL064W-like protein [Saccharomyces cerevisiae AWRI796]
          Length = 257

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|332796503|ref|YP_004458003.1| methylase [Acidianus hospitalis W1]
 gi|332694238|gb|AEE93705.1| methylase [Acidianus hospitalis W1]
          Length = 197

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 63/118 (53%), Gaps = 13/118 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  ++L ++ + +EP  +TELL+      S+ +I+K +  +++++G+G+G   L+++  
Sbjct: 8   EFNGIKLCINDEVYEPAEDTELLL------SIVKIKKGE--KVVEIGSGSG--ILSIISA 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
               K   +DI+  A      ++  N +    D +  D  + +  + FDV + NPPY+
Sbjct: 58  KMGGKVYSIDINPFASLATLCSSKLNNL--YIDVINCDMLTCLRNITFDVGIFNPPYL 113


>gi|332286437|ref|YP_004418348.1| putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
           [Pusillimonas sp. T7-7]
 gi|330430390|gb|AEC21724.1| putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
           [Pusillimonas sp. T7-7]
          Length = 226

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RILD G G G     L K  P  +  G D+S ++LEIA     T         L SDW
Sbjct: 48  TTRILDFGCGAGRSLPYLAKHFPGSEIWGYDVSQESLEIASKREPT-------AHLFSDW 100

Query: 158 FSSVEGLFDVIVS 170
               +  FDVIV+
Sbjct: 101 TKIADINFDVIVA 113


>gi|327395458|dbj|BAK12880.1| ribosomal protein L11 methyltransferase PrmA [Pantoea ananatis
           AJ13355]
          Length = 294

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDLQAIQASRDNAERNGVADRL 210


>gi|321460102|gb|EFX71148.1| hypothetical protein DAPPUDRAFT_216956 [Daphnia pulex]
          Length = 218

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D  ++  T   + +EP  ++ L++D AL   +P I+       L++G+G+G V   L K 
Sbjct: 9   DLSHLNSTDYENVYEPAEDSFLMLD-ALESEIPFIKSLKPTICLEIGSGSGIVLTGLAKC 67

Query: 119 ----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGLFDVIVSNP 172
                 +F    +DI+  A ++ +  A  N V        L       ++   D++V NP
Sbjct: 68  LGSCCAYF---SIDINPHAAQVTRKTACKNSVCLEVVNCDLVGPLLPQIQNKVDMLVFNP 124

Query: 173 PYIES 177
           PY+ +
Sbjct: 125 PYVPT 129


>gi|239927778|ref|ZP_04684731.1| hypothetical protein SghaA1_06116 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436121|ref|ZP_06575511.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339016|gb|EFE65972.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 300

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D G+G G +     +  P  + V VD S   LE A   A   GV++RFDTL  +
Sbjct: 60  VVDAGSGPGVISCLFAETFPGARIVAVDGSKPLLERAADRAARQGVADRFDTLAGE 115


>gi|229042277|ref|ZP_04190029.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH676]
 gi|228727068|gb|EEL78273.1| Type I restriction-modification system, M subunit [Bacillus cereus
           AH676]
          Length = 530

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER- 149
           E + +  + D   G+G++ L +   +      K  G +++     +AK N + +GV +  
Sbjct: 214 EDKKLFSVFDPTMGSGSLMLNIRNYINHPDSVKYHGQELNTTTYNLAKMNLILHGVDKED 273

Query: 150 -----FDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL  DW +     FD ++ NPPY
Sbjct: 274 MSLRNGDTLNKDWPTDEPYTFDSVLMNPPY 303


>gi|297201351|ref|ZP_06918748.1| transferase [Streptomyces sviceus ATCC 29083]
 gi|197712785|gb|EDY56819.1| transferase [Streptomyces sviceus ATCC 29083]
          Length = 508

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 16/125 (12%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +AL I       +G +   D  +   F  V
Sbjct: 173 LDLGTGSGIQALHAAQHA--TRVTATDLNPRALHITALTLALSG-APAADLREGSLFEPV 229

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +    +D+IVSNPP+   VI     L  R        DGG+ G    R++  G    LN+
Sbjct: 230 KQGETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRSVVQGAGELLNE 278

Query: 220 DGLCS 224
            G   
Sbjct: 279 GGFAQ 283


>gi|37521085|ref|NP_924462.1| hypothetical protein glr1516 [Gloeobacter violaceus PCC 7421]
 gi|35212081|dbj|BAC89457.1| glr1516 [Gloeobacter violaceus PCC 7421]
          Length = 449

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF 158
           RILD G G+G   LAL + +P  + VG+D+S +++ +A+     +G  S  F  L  +  
Sbjct: 65  RILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAEFHALPIERV 124

Query: 159 SSVEGLFDVI 168
             +   FD+I
Sbjct: 125 GELGEDFDLI 134


>gi|89072497|ref|ZP_01159069.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp.
           SKA34]
 gi|89051601|gb|EAR57054.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp.
           SKA34]
          Length = 340

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +ELL+++     LP++  +    +LD G G G +   +  + P       DIS  A+E A
Sbjct: 189 SELLLNN-----LPKLHGK----VLDFGCGAGVIGAVMKAKYPTIDLELCDISALAIESA 239

Query: 138 KSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K     N + + +F    +D + ++ G +  ++SNPP+
Sbjct: 240 KETFKVNNLDASKFTA--TDVYKTLTGPYQFLISNPPF 275


>gi|82539478|ref|XP_724124.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478663|gb|EAA15689.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 227

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 22/162 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPFF 122
           SSDTF      E L D A   S       +V  +L++GTG+G + L L      K     
Sbjct: 28  SSDTF---VFAEALEDDAETIS------SNVNMVLEMGTGSGYLILFLYELLLKKNKRID 78

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
               +DI+  A    ++    NG+S   + + SD F+++   G FD+I+ NPPY+E+   
Sbjct: 79  LLYCIDINKDACNCVQNAINLNGIS-NVEIINSDLFNNLRKCGQFDIILFNPPYVETE-- 135

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                E+   D   S  GG  G          V  HL+ +G+
Sbjct: 136 ---QDEMNKTDIVASYAGGKHGREVILKFLHTVYDHLSNNGI 174


>gi|332521493|ref|ZP_08397947.1| RNA methyltransferase, TrmA family [Lacinutrix algicola 5H-3-7-4]
 gi|332042892|gb|EGI79091.1| RNA methyltransferase, TrmA family [Lacinutrix algicola 5H-3-7-4]
          Length = 470

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K VGV+    A+  AK NA  NG+            + 
Sbjct: 327 VYDLYTGTGTIAQFVAKQAK--KVVGVEAVPDAITAAKENAQLNGIDNVSFFVGDMKNVF 384

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +  F    G  DVI+++PP
Sbjct: 385 NQEFIETHGQPDVIITDPP 403


>gi|325264034|ref|ZP_08130766.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
 gi|324030518|gb|EGB91801.1| methyltransferase, UbiE/COQ5 family [Clostridium sp. D5]
          Length = 381

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+GT TG   +A++  S   K   VDIS   L+ A+S A  +G S  F  + +   
Sbjct: 51  LKILDIGTATGF--MAIVCASLGHKVTAVDISRHMLKRARSAAAESGFSVTFLQMDAHQL 108

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
               G FDV++        +   C+ +E+
Sbjct: 109 DFPSGSFDVVICRSTIWTILDPRCVYMEI 137


>gi|242398179|ref|YP_002993603.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
           [Thermococcus sibiricus MM 739]
 gi|242264572|gb|ACS89254.1| Cyclopropane-fatty-acyl-phospholipid synthase superfamily
           [Thermococcus sibiricus MM 739]
          Length = 245

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 14/116 (12%)

Query: 57  WRDFYNVRLTL---SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W +F++         + T   + E + L++    F LP     +  +ILD+G G G   L
Sbjct: 6   WEEFFDREADYYLQEAFTKHTKKEIDFLLEE---FKLP-----EGAKILDVGCGVGRHSL 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            L K    ++  GVDIS K LE A+  A   GV   F    +  F+  E  FD  V
Sbjct: 58  ELAKRG--YRVTGVDISQKMLEKAEERAQKEGVEVEFIKADATKFARNEK-FDAAV 110


>gi|237709870|ref|ZP_04540351.1| RNA methyltransferase [Bacteroides sp. 9_1_42FAA]
 gi|229455963|gb|EEO61684.1| RNA methyltransferase [Bacteroides sp. 9_1_42FAA]
          Length = 473

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 17/104 (16%)

Query: 83  DSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +S  A++L ++  R+  R      + DL TGTG +   + +++   K +G++   +A+E 
Sbjct: 306 NSGQAYNLYKV-ARNFARLTGNELVYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIED 362

Query: 137 AKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           AK N+  NG+           D L  + F S  G  DVI+++PP
Sbjct: 363 AKVNSAINGIDNTLFYAGDMKDILTQE-FISQHGRPDVIITDPP 405


>gi|269213887|ref|ZP_06158240.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC
           14685]
 gi|269145275|gb|EEZ71693.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC
           14685]
          Length = 139

 Score = 37.7 bits (86), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F   D L    
Sbjct: 11  VLDYGCGSGILTIASLKLGAG-SAVGVDIDEQAIRASKDNAEQNNVDAQFFLPDGLP--- 66

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 67  ----QGQFDVVVAN 76


>gi|332558075|ref|ZP_08412397.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides WS8N]
 gi|332275787|gb|EGJ21102.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 396

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           + + VD S  AL +A++ A   G+ +RF+T Q+D F ++E L      FD+++
Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297


>gi|325661177|ref|ZP_08149804.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472684|gb|EGC75895.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 189

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 64  RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           RL L + D  + RP T+ + ++      P +      R LDL  G+G + +  L      
Sbjct: 10  RLQLKTLDGLDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIEALSRGAG- 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174
           + V V+ + KA+   K N     + ER  T+ +D  +++      G FD I  +PPY
Sbjct: 66  EAVFVEQNPKAMACIKENLKKTKLEERAVTMTTDVMTALRRMEGSGTFDYIFMDPPY 122


>gi|323345539|ref|ZP_08085762.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC
           33269]
 gi|323093653|gb|EFZ36231.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC
           33269]
          Length = 305

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)

Query: 64  RLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++T+  DT +       ET  ++ SAL  ++   EKR    ILD G GTG + +A LK  
Sbjct: 135 KITIGIDTKQAFGTGTHETTRMIISAL-LTIDIKEKR----ILDCGCGTGILGIAALKLG 189

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSN 171
              + VG DI   ++  +K NA  N    R D +Q         + V G+FD++++N
Sbjct: 190 A-AQAVGYDIDEWSVNNSKHNAQIN----RIDNMQVLHGNVHVLTHVNGIFDIVLAN 241


>gi|253988778|ref|YP_003040134.1| hypothetical protein PAU_01297 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780228|emb|CAQ83389.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 244

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 13/137 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQ- 154
           D   ILD+G G+G + L L + +     +  V++   A   A+ N   +    + +    
Sbjct: 43  DKKAILDIGCGSGLIALMLAQRTDKNTKIDAVELDINAAFQAQENVEQSPWRRKVNVYHQ 102

Query: 155 --SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +D+       +D+IVSNPPY E  I  C   E R+   R +       L+H R + D 
Sbjct: 103 DINDFADRYSQCYDLIVSNPPYFEPAIA-CRN-EARE-QARYT-----GSLTHQRLLQDA 154

Query: 213 VSRHLNKDGLCSVEIGY 229
             + +  DGL  V + Y
Sbjct: 155 -EKLITPDGLFCVVLPY 170


>gi|254172832|ref|ZP_04879506.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
 gi|214032988|gb|EEB73816.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
          Length = 418

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKR-DVVRILDLGTGTGAVCLALLKESP 120
           +R  L    +   P +    +S  A  L R + KR D  R+LDL +G G   + L K   
Sbjct: 242 IREELDGTLYLIHPNSFFQTNSYGAVELLREVAKRVDGERVLDLYSGVGTFGVYLAKRG- 300

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            F+  G++I+  A+++A  NA  NGV+  F         S+   +D ++ +PP
Sbjct: 301 -FRVEGIEINPFAVKMANRNAELNGVNASFRVGADRDVESLRA-YDTVIVDPP 351


>gi|116629813|ref|YP_814985.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323]
 gi|282851681|ref|ZP_06261046.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1]
 gi|116095395|gb|ABJ60547.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323]
 gi|282557649|gb|EFB63246.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1]
          Length = 182

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SD-- 156
           ++LDL  G+GA+ +  +    +   V VDIS +A +I + N       +RF  L+ SD  
Sbjct: 44  QVLDLYAGSGALGIEAVSRG-YDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCSDNR 102

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCL 183
                +  E  FD+I  +PPY +  IV  +
Sbjct: 103 AIKILNEEEKKFDLIFLDPPYAKQKIVKIM 132


>gi|332673287|gb|AEE70104.1| type I restriction enzyme M protein [Helicobacter pylori 83]
          Length = 487

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTNSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFSS-VEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECKGRMDYIVSNPPF 315


>gi|329955143|ref|ZP_08296100.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides clarus YIT
           12056]
 gi|328526142|gb|EGF53161.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides clarus YIT
           12056]
          Length = 475

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + K++   + +G++   +A+E AK NA  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSKQAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D+ +   G  DVI+++PP
Sbjct: 387 TQDFINEY-GRPDVIITDPP 405


>gi|328953121|ref|YP_004370455.1| O-methyltransferase family 2 [Desulfobacca acetoxidans DSM 11109]
 gi|328453445|gb|AEB09274.1| O-methyltransferase family 2 [Desulfobacca acetoxidans DSM 11109]
          Length = 339

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L ++  +D+  +LDLG G  +  +A  ++ P  K    D+    + IA+ N V +G++ R
Sbjct: 161 LEQLNLKDIKHLLDLGGGPASYAIAFAQQYPQLKATVFDLPLP-ISIARENLVRHGLTSR 219

Query: 150 FDTLQSDWF 158
             T+  ++ 
Sbjct: 220 VQTIAGNFL 228


>gi|312069129|ref|XP_003137538.1| hypothetical protein LOAG_01952 [Loa loa]
 gi|307767298|gb|EFO26532.1| hypothetical protein LOAG_01952 [Loa loa]
          Length = 493

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 10/84 (11%)

Query: 102 LDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWF 158
           +D+GTG   V  ALL    F ++ V  D    A+EIA  N   NG++ER + ++  +D  
Sbjct: 105 IDIGTGASCV-YALLGAKQFGWRFVATDADAFAVEIASQNVEKNGMTERIEVVRVPADCM 163

Query: 159 ------SSVEGLFDVIVSNPPYIE 176
                 S  E  F   + NPP+ E
Sbjct: 164 IKNVVRSHPETEFTFCMCNPPFYE 187


>gi|317049792|ref|YP_004117440.1| 50S ribosomal protein L11 methyltransferase [Pantoea sp. At-9b]
 gi|316951409|gb|ADU70884.1| ribosomal protein L11 methyltransferase [Pantoea sp. At-9b]
          Length = 293

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210


>gi|109896776|ref|YP_660031.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica
           T6c]
 gi|122972352|sp|Q15YR1|RLMG_PSEA6 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|109699057|gb|ABG38977.1| 23S rRNA m(2)G-1835 methyltransferase [Pseudoalteromonas atlantica
           T6c]
          Length = 384

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 11/109 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ------ 154
           I+DLG G G + L +L +SP    + VD S  A+  AK N +   + ++ D  +      
Sbjct: 237 IVDLGCGNGVLGLHVLHKSPGAHVIFVDESFMAIASAKMN-IEQNMPDKLDQCKFIVSNC 295

Query: 155 -SDWFSS--VEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199
             +  SS   E   D+++ NPP+  ++ I D + L++     RI    G
Sbjct: 296 LDECLSSGENEATVDIVLCNPPFHQQNTITDHIALQMFKDSKRILKHAG 344


>gi|85096727|ref|XP_960315.1| hypothetical protein NCU07132 [Neurospora crassa OR74A]
 gi|28921802|gb|EAA31079.1| predicted protein [Neurospora crassa OR74A]
          Length = 229

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLG GTG   + +  + PF K VGVD+S     ++  N       +  +  + ++F 
Sbjct: 142 KILDLGCGTGKWTVEIADKFPFAKVVGVDLSPIQAVLSPEN--VEWWVDDIEDEEENFFE 199

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGL 185
           +    +D++ +   Y+ S++VD  GL
Sbjct: 200 TERNDYDLVHAR--YLLSMVVDPAGL 223


>gi|307136455|gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]
          Length = 256

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALLKESPFFKGV 125
           + +EP  ++  LVD+ LA  + ++   +    L+ G G+G V     L L KE+     +
Sbjct: 17  EVYEPCDDSFALVDALLADRV-KLLNHNPTLCLEFGCGSGYVITSLALILGKEASATHYI 75

Query: 126 GVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIES 177
             DI+  A+ + +     +G+        L S     + G  DV+V NPPY+ +
Sbjct: 76  ATDINPHAIRVTQETLEAHGLHAELVCTDLASGLEKRLAGSVDVLVVNPPYVPT 129


>gi|269961960|ref|ZP_06176315.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
           1DA3]
 gi|269833283|gb|EEZ87387.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
           1DA3]
          Length = 341

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  +    +LD G G G +   + + +P       DI+  A+  +++    NG+S 
Sbjct: 196 TLPKLSGK----VLDFGCGAGVLGAFMAQANPEIAIEMCDINAYAITSSQATLEANGLSG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD +S     +  IVSNPP+
Sbjct: 252 R--VFASDIYSDTAKDYRFIVSNPPF 275


>gi|302520733|ref|ZP_07273075.1| methyltransferase [Streptomyces sp. SPB78]
 gi|302429628|gb|EFL01444.1| methyltransferase [Streptomyces sp. SPB78]
          Length = 308

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+DLG+GTGA   ALL   P      VD S   L+  +  A   G+  R  T+ +D
Sbjct: 82  IVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 137


>gi|227546793|ref|ZP_03976842.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|322691575|ref|YP_004221145.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227212755|gb|EEI80636.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|320456431|dbj|BAJ67053.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 258

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142
           LA  LP  +   V R+LD+G G G     L +  P  K +GVD S   +E A+       
Sbjct: 23  LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81

Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                VS R D L +D        FDV+ SN
Sbjct: 82  FQLCDVSARLDELPAD--------FDVVFSN 104


>gi|226360022|ref|YP_002777800.1| hypothetical protein ROP_06080 [Rhodococcus opacus B4]
 gi|226238507|dbj|BAH48855.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 283

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 33/57 (57%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R++D+G GTG   LAL +  P  + + +D S   LE  ++ A+  G+++R   + +D
Sbjct: 55  RVVDVGAGTGVGSLALARRFPAAEVIAIDRSEVMLERVRAAALGQGMADRVSGVHAD 111


>gi|225378659|ref|ZP_03755880.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM
           16841]
 gi|225209496|gb|EEG91850.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM
           16841]
          Length = 247

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           ++LDLGTGTG + + +  ++       ++I  ++ ++A+ +   N + ++   +  D   
Sbjct: 50  KVLDLGTGTGIIPILMEAKTDAADFTALEIQEESADMARRSVAYNHLEDKIKVVTGDIRD 109

Query: 158 FSSVEGL--FDVIVSNPPYI 175
            S++ G   F VI +NPPY+
Sbjct: 110 ASNIFGASSFHVITTNPPYM 129


>gi|148269321|ref|YP_001243781.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           petrophila RKU-1]
 gi|147734865|gb|ABQ46205.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           petrophila RKU-1]
          Length = 220

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           ++LDL TGTG V   L +++P  +  G+D S K LEIA+ 
Sbjct: 41  KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 80


>gi|326799623|ref|YP_004317442.1| methyltransferase type 12 [Sphingobacterium sp. 21]
 gi|326550387|gb|ADZ78772.1| Methyltransferase type 12 [Sphingobacterium sp. 21]
          Length = 224

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)

Query: 89  SLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           SLP I+       +LD+G GTG     + + +P  K   +DIS + L +AK      G+S
Sbjct: 33  SLPLIQNHYHAENLLDIGAGTGLFSYFVYQVNPKLKYTLLDISPEMLAVAKRRFT--GLS 90

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSN 171
             F  L+ D+   S+ G +D+I+S+
Sbjct: 91  H-FSYLEMDYRERSLPGKYDIIISS 114


>gi|297156578|gb|ADI06290.1| O-methyltransferase family 2 [Streptomyces bingchenggensis BCW-1]
          Length = 363

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +K +VV +LD+G GTG     LL+  P +K  G+D + + + +A + A   GV  RF
Sbjct: 181 KKDEVVSVLDVGCGTGLYSQLLLERFPTWKAEGID-APRIIRLATAQAERLGVGSRF 236


>gi|268319679|ref|YP_003293335.1| hypothetical protein FI9785_1207 [Lactobacillus johnsonii FI9785]
 gi|262398054|emb|CAX67068.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 182

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G+GA+ +  +    +   V VDIS +A ++ K N       ERF  L+     
Sbjct: 44  QVLDLYAGSGALGIEAVSRG-YDGAVLVDISGQACQVIKKNVELTKEEERFRVLKCSDNR 102

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCL 183
           +++ L      FD++  +PPY +  IV  +
Sbjct: 103 AIKILQDEGKKFDLVFLDPPYAKQKIVKIM 132


>gi|260587915|ref|ZP_05853828.1| methyltransferase domain protein [Blautia hansenii DSM 20583]
 gi|260541442|gb|EEX22011.1| methyltransferase domain protein [Blautia hansenii DSM 20583]
          Length = 192

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LD+  GTGA+ +AL +++P      +D+S K  EIAK+    N +   FD    
Sbjct: 35  KEHTRVLDVACGTGAMFVALQEKNP-EHITAIDVSEKMAEIAKNKVKDNPL---FDVRCG 90

Query: 156 DWFSSVEGLFDVIVSNPPY 174
           D+F   +  +D I+    Y
Sbjct: 91  DFFEIEDEKYDCIMIYNAY 109


>gi|261855970|ref|YP_003263253.1| ribosomal protein L11 methyltransferase [Halothiobacillus
           neapolitanus c2]
 gi|261836439|gb|ACX96206.1| ribosomal protein L11 methyltransferase [Halothiobacillus
           neapolitanus c2]
          Length = 303

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 16/87 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157
           +R+LD+G G+G + LA L +       G DI  +AL+ ++ NA  N + E RF      W
Sbjct: 168 LRVLDVGCGSGILALAALMKGASV-AYGTDIDPQALKASRDNAALNDIPEDRF------W 220

Query: 158 FS-----SVEGLFDVIVSN---PPYIE 176
                  + E  FDV+++N    P IE
Sbjct: 221 LGLPEELAAEEKFDVLIANILAQPLIE 247


>gi|159128825|gb|EDP53939.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Aspergillus fumigatus A1163]
          Length = 355

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F+G  VGVD S +++E+A+
Sbjct: 124 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162


>gi|70989121|ref|XP_749410.1| S-adenosylmethionine-dependent methyltransferase [Aspergillus
           fumigatus Af293]
 gi|66847041|gb|EAL87372.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Aspergillus fumigatus Af293]
          Length = 355

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F+G  VGVD S +++E+A+
Sbjct: 124 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 162


>gi|308182610|ref|YP_003926737.1| Type I restriction enzyme M protein [Helicobacter pylori PeCan4]
 gi|308064795|gb|ADO06687.1| Type I restriction enzyme M protein [Helicobacter pylori PeCan4]
          Length = 543

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L + K N + N 
Sbjct: 226 EPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S   +G  D IVSNPP+
Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKEFKGKMDFIVSNPPF 315


>gi|148378068|ref|YP_001252609.1| hypothetical protein CBO0060 [Clostridium botulinum A str. ATCC
           3502]
 gi|153931253|ref|YP_001382467.1| hypothetical protein CLB_0096 [Clostridium botulinum A str. ATCC
           19397]
 gi|153935508|ref|YP_001386019.1| hypothetical protein CLC_0108 [Clostridium botulinum A str. Hall]
 gi|148287552|emb|CAL81616.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927297|gb|ABS32797.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931422|gb|ABS36921.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 246

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPY 174
             N + E+   ++ D         +E + DV+  NPPY
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIEKV-DVVTVNPPY 126


>gi|110678101|ref|YP_681108.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
           denitrificans OCh 114]
 gi|109454217|gb|ABG30422.1| 3-demethylubiquinone-9 3-methyltransferase [Roseobacter
           denitrificans OCh 114]
          Length = 206

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V   LAF   +I+ RD  R+LDLG   G +  AL +        G+D + +A++ A+ +
Sbjct: 38  MVPGRLAFFDRKIDWRDK-RVLDLGCAGGFMAEALCERGAIV--TGIDPAAQAIDAAREH 94

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A  +G   R+D  + +     +  FD +V
Sbjct: 95  AELDGHDIRYDVGKGETLPYADDSFDAVV 123


>gi|134298567|ref|YP_001112063.1| type 11 methyltransferase [Desulfotomaculum reducens MI-1]
 gi|134051267|gb|ABO49238.1| Methyltransferase type 11 [Desulfotomaculum reducens MI-1]
          Length = 251

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +S L F     +   V R+LDLG G+G   L   K       VG+D   + + +A+  A 
Sbjct: 17  ESQLKFFRQTFDDLGVSRVLDLGCGSGNYPLEFAKWG--LTVVGLDYEQEMIRLAREKAR 74

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIV 169
             GVS  F T        ++G FD I+
Sbjct: 75  KAGVSVDFMTGDMRNLEDIDGKFDAII 101


>gi|322689614|ref|YP_004209348.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320460950|dbj|BAJ71570.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 258

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142
           LA  LP  +   V R+LD+G G G     L +  P  K +GVD S   +E A+       
Sbjct: 23  LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81

Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                VS R D L +D        FDV+ SN
Sbjct: 82  FQLCDVSARLDELPAD--------FDVVFSN 104


>gi|291619128|ref|YP_003521870.1| PrmA [Pantoea ananatis LMG 20103]
 gi|291154158|gb|ADD78742.1| PrmA [Pantoea ananatis LMG 20103]
          Length = 294

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAQAIGIDIDPQAIQASRDNAERNGVADRL 210


>gi|256269784|gb|EEU05050.1| YIL064W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 257

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMKINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|221639058|ref|YP_002525320.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides KD131]
 gi|221159839|gb|ACM00819.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides KD131]
          Length = 396

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           + + VD S  AL +A++ A   G+ +RF+T Q+D F ++E L      FD+++
Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297


>gi|167762093|ref|ZP_02434220.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC
           43183]
 gi|167700052|gb|EDS16631.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC
           43183]
          Length = 241

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 31/47 (65%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           + +R    I+D+ TGTG V +++ K+ P  + VG+D+S + L++A+ 
Sbjct: 48  VAERKPTNIVDIATGTGDVAISMAKKIPTSQIVGIDLSEEMLKVAQQ 94


>gi|149920793|ref|ZP_01909256.1| type I restriction-modification system methylation subunit
           [Plesiocystis pacifica SIR-1]
 gi|149818311|gb|EDM77763.1| type I restriction-modification system methylation subunit
           [Plesiocystis pacifica SIR-1]
          Length = 591

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 29/142 (20%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--------- 118
           + + + PR    L+VD+        ++ ++   I D   GTG + LA ++          
Sbjct: 262 AGEFYTPRSVVRLMVDT--------LDPQEGETIYDPACGTGGMLLAAVEHVKDAGGDPR 313

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQSDWFSSVEG----LFDVIVS 170
           + F K  G + +     +A+ N   +GV E    R DTL+   F+S E      FD++++
Sbjct: 314 TFFGKLFGQEKNLTTASVARMNLQLHGVEEFDIRRGDTLRRPAFASAEDHSLRQFDIVLA 373

Query: 171 NPPYIESVIVDCLGLEVRDFDP 192
           NPP+     +   G +V + DP
Sbjct: 374 NPPF----SLKNWGRDVWESDP 391


>gi|37521220|ref|NP_924597.1| hypothetical protein gll1651 [Gloeobacter violaceus PCC 7421]
 gi|35212216|dbj|BAC89592.1| gll1651 [Gloeobacter violaceus PCC 7421]
          Length = 224

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  + +VD  L  +  ++ K DV  I DLG+G G + +   K+    +G+G+DI+   + 
Sbjct: 74  PTPQEVVDQMLTVA--KVGKDDV--IYDLGSGDGRIVVTAAKQY-GARGIGIDINPARIV 128

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            A  NA   GV+ +   L+ D F +
Sbjct: 129 EANENARKAGVTNQVRFLEQDLFET 153


>gi|46190628|ref|ZP_00121286.2| COG4106: Trans-aconitate methyltransferase [Bifidobacterium longum
           DJO10A]
 gi|189438940|ref|YP_001954021.1| trans-aconitate methyltransferase [Bifidobacterium longum DJO10A]
 gi|189427375|gb|ACD97523.1| Trans-aconitate methyltransferase [Bifidobacterium longum DJO10A]
          Length = 258

 Score = 37.7 bits (86), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142
           LA  LP  +   V R+LD+G G G     L +  P  K +GVD S   +E A+       
Sbjct: 23  LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81

Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                VS R D L +D        FDV+ SN
Sbjct: 82  FQLCDVSARLDELPAD--------FDVVFSN 104


>gi|326774487|ref|ZP_08233752.1| Methyltransferase type 11 [Streptomyces cf. griseus XylebKG-1]
 gi|326654820|gb|EGE39666.1| Methyltransferase type 11 [Streptomyces cf. griseus XylebKG-1]
          Length = 248

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDL +G+G +     ++  F  G GVDIS    E A++ A   GV++R D L  D
Sbjct: 38  TRVLDLASGSGEMLCTWARDLGF-TGSGVDISTIFTEQAQARAAELGVADRVDFLHGD 94


>gi|291549934|emb|CBL26196.1| 23S rRNA m(5)U-1939 methyltransferase [Ruminococcus torques L2-14]
          Length = 456

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)

Query: 53  RILGWRDFYNVRL------TLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDVVRILDLG 105
           RIL  +DF+  +L            F+P  +  E+L ++   +    I   D   + DL 
Sbjct: 263 RILYGQDFFYEKLLGLEFKITPFSFFQPNSKGAEVLYETVREY----IGDIDNQVVFDLF 318

Query: 106 TGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS---S 160
           +GTG +   L   +P  K V GV+I  +A+E AK NAV NG+   +F  +  D F     
Sbjct: 319 SGTGTIGQVL---APVAKKVIGVEIIEEAVEAAKENAVRNGLYNCKF--IAGDVFKVLDE 373

Query: 161 VEGLFDVIVSNPP 173
           +E   DVIV +PP
Sbjct: 374 IEEKPDVIVLDPP 386


>gi|268685806|ref|ZP_06152668.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626090|gb|EEZ58490.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 311

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 239 ----QGQFDVVVAN 248


>gi|281418183|ref|ZP_06249203.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|281409585|gb|EFB39843.1| putative RNA methylase [Clostridium thermocellum JW20]
          Length = 409

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A L  +       VDIS  A+++AKSNAV NG+  + D +  D F
Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKSNAVRNGLDGKMDFVCEDVF 293

Query: 159 SSVEGL-------FDVIVSNPP 173
             +  L       +D I+ +PP
Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315


>gi|170287980|ref|YP_001738218.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           sp. RQ2]
 gi|170175483|gb|ACB08535.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermotoga
           sp. RQ2]
          Length = 220

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           ++LDL TGTG V   L +++P  +  G+D S K LEIA+ 
Sbjct: 41  KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 80


>gi|163759168|ref|ZP_02166254.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
           phototrophica DFL-43]
 gi|162283572|gb|EDQ33857.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
           phototrophica DFL-43]
          Length = 423

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 12/144 (8%)

Query: 34  QRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +RF   N + RS  +   H  +G   +R F +  +  S   F   PET   ++ A     
Sbjct: 106 RRFQQNNVLSRSRANVKAHYDIGEDLYRLFLDRDMQYSCAYFPDGPET---IEDAQTLKK 162

Query: 91  PRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             I  +    D  R+LD+G G G + L L   +   + VGV +S + L +A+  A   GV
Sbjct: 163 RHIAAKLCLKDGQRVLDIGCGWGGMALYLAHVADV-EVVGVTLSERQLAVARRRAEILGV 221

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
           S+R      D +  V   FD +VS
Sbjct: 222 SDRVRFELID-YREVTEKFDRVVS 244


>gi|126462072|ref|YP_001043186.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103736|gb|ABN76414.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 396

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           + + VD S  AL +A++ A   G+ +RF+T Q+D F ++E L      FD+++
Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297


>gi|322382544|ref|ZP_08056424.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153460|gb|EFX45865.1| hypothetical protein PL1_2270 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 185

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++  +   P     D   +LDL  GTG + +  L      KG+ VDI  K+L
Sbjct: 22  RPTTDKVKEAIFSMIGPYF---DGGSVLDLFAGTGGLGIEALSRG-MEKGIFVDIEKKSL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLG 184
           +  + N     +S+R +  ++D   +++ L      F+++  +PPY   +I + +G
Sbjct: 78  DTIRHNLEAAKLSDRAEVYRNDAKRALKILAKRNQQFNLVFLDPPYRMKMIRELIG 133


>gi|269795602|ref|YP_003315057.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
 gi|269097787|gb|ACZ22223.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
          Length = 217

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G V L +  ++P  +   VD++ +AL++ + NA   G+         D  + 
Sbjct: 65  VLDLGAGWGPVSLTMAMQNPQARVWAVDVNERALDLVRRNAARLGLENVTACTPDDVPAD 124

Query: 161 VEGLFDVIVSNPP 173
           V   F  + SNPP
Sbjct: 125 VR--FAQLWSNPP 135


>gi|254785988|ref|YP_003073417.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901]
 gi|237687034|gb|ACR14298.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901]
          Length = 342

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + + LLK + + + +  D +  A+    +    NG ++ F  + +D  SS+
Sbjct: 208 LDLGCGYGYLGVGLLK-AGWQQIIATDNNAAAVLACNATLTENG-AQNFSVVAADCGSSI 265

Query: 162 EGLFDVIVSNPPYIESVIVD 181
           E   D++V NPP+ +   V+
Sbjct: 266 ERKADLVVCNPPFHQGFGVE 285


>gi|269926088|ref|YP_003322711.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269789748|gb|ACZ41889.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 315

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G +  A+ K     + + VDI   A+  AKS    NG+S++   L+       
Sbjct: 182 LDLGTGSGILAAAMAKLGAK-QVLAVDIDPVAVSAAKSTVERNGISDKVQVLEGS-IEKA 239

Query: 162 EGLFDVIVSNPPYIESVIVD 181
              +D I +N   I SVI++
Sbjct: 240 TAQYDFIAAN--IIASVIIE 257


>gi|182433951|ref|YP_001821670.1| hypothetical protein SGR_158 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462467|dbj|BAG16987.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 255

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDL +G+G +     ++  F  G GVDIS    E A++ A   GV++R D L  D
Sbjct: 45  TRVLDLASGSGEMLCTWARDLGF-TGSGVDISTIFTEQAQARAAELGVADRVDFLHGD 101


>gi|167970986|ref|ZP_02553263.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
 gi|186701152|gb|EDU19434.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
          Length = 367

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 72  FEPRPETELLVDSALA-FSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F P+  +ELLV+  L  F+    + +R + ++ D   G+G++ L   K +   K  G +I
Sbjct: 44  FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 103

Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPY 174
           +     +A+ N   + +  ++FD    D       + +  FD IVSNPPY
Sbjct: 104 NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPY 153


>gi|1045230|emb|CAA63163.1| N-methyl-transferase [Streptomyces alboniger]
          Length = 228

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 20/142 (14%)

Query: 102 LDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           L++G GTG + + A L  S       +DI+ KA+    +NA  +GV +R   L SD +++
Sbjct: 65  LEVGCGTGVISVTAALHGSDV---TALDINEKAVANTLANAERHGVEDRVRVLHSDLYAA 121

Query: 161 VEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +E    FD I  N P  Y+E        L    FDP      G  G S + +   G   H
Sbjct: 122 LEPTDRFDAIFWNVPWTYVEDGFPLSSDLHSAVFDP------GYQGQSRFIS---GARDH 172

Query: 217 LNKDG---LCSVEIGYNQKVDV 235
           L   G   + + ++G  +++D 
Sbjct: 173 LADGGRLLIGTADLGDRERIDA 194


>gi|85374263|ref|YP_458325.1| ribosomal protein L11 methylase [Erythrobacter litoralis HTCC2594]
 gi|84787346|gb|ABC63528.1| ribosomal protein L11 methylase [Erythrobacter litoralis HTCC2594]
          Length = 306

 Score = 37.7 bits (86), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 26/48 (54%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           I D+GTGTG +    L+  P       DI    + + ++NA TNG+++
Sbjct: 157 IADIGTGTGLLAFGALRLWPHATMTATDIDANCVPVIEANAATNGIAQ 204


>gi|331084510|ref|ZP_08333611.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401218|gb|EGG80809.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 192

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LD+  GTGA+ +AL +++P      +D+S K  EIAK+    N +   FD    
Sbjct: 35  KEHTRVLDVACGTGAMFVALQEKNP-EHITAIDVSEKMAEIAKNKVKDNPL---FDVRCG 90

Query: 156 DWFSSVEGLFDVIVSNPPY 174
           D+F   +  +D I+    Y
Sbjct: 91  DFFEIEDEKYDCIMIYNAY 109


>gi|293397759|ref|ZP_06641965.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           F62]
 gi|291611705|gb|EFF40774.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           F62]
          Length = 311

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 239 ----QGQFDVVVAN 248


>gi|296129408|ref|YP_003636658.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
 gi|296021223|gb|ADG74459.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
          Length = 205

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G V L L   SP  +   VD++ +AL++ + NA   G+         D    
Sbjct: 69  LLDLGCGWGPVALTLALLSPDARVWAVDVNERALDLVRRNAARLGLGNVVAATPDD--VP 126

Query: 161 VEGLFDVIVSNPP 173
           V+  F  + SNPP
Sbjct: 127 VDVAFAALWSNPP 139


>gi|148654529|ref|YP_001274734.1| RNA methyltransferase [Roseiflexus sp. RS-1]
 gi|148566639|gb|ABQ88784.1| RNA methyltransferase, TrmA family [Roseiflexus sp. RS-1]
          Length = 434

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 9/110 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVV-----RILDLGTGTGAVCLALLKESPFFKGV 125
           TF  RP T   V+ A A +L  + +  +      R+LDL  G G   L L + +   + V
Sbjct: 260 TFLLRPTTFFQVNVAAATTLLNLIRAGLGDEAGGRLLDLYCGAGTFTLPLARAA--IQVV 317

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW-FSSVEGLFDVIVSNPP 173
           GV+    A+  A+ +A  N VS  RF   +++   SS+EG FD IV +PP
Sbjct: 318 GVEEYPGAVADAERSAAVNHVSNVRFVVGRAEAVLSSLEGDFDAIVLDPP 367


>gi|317163463|gb|ADV07004.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 311

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 183 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 238

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 239 ----QGQFDVVVAN 248


>gi|268610816|ref|ZP_06144543.1| putative methyltransferase type 11 [Ruminococcus flavefaciens FD-1]
          Length = 214

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           L  +EK     +LD G GTG +   L ++ P     G+D++ K +E+AK  A+ N
Sbjct: 40  LAELEKEPFNDLLDCGCGTGPMLTLLHEKYPEKHYTGIDLTPKMIEVAKRKALKN 94


>gi|251793183|ref|YP_003007911.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534578|gb|ACS97824.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 294

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSD 216


>gi|257388001|ref|YP_003177774.1| methyltransferase [Halomicrobium mukohataei DSM 12286]
 gi|257170308|gb|ACV48067.1| methyltransferase [Halomicrobium mukohataei DSM 12286]
          Length = 333

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 11/87 (12%)

Query: 79  ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E LVD    +  PR+  E+  VV       R LD+  G G   +   +       VGVD+
Sbjct: 154 EFLVDLDAVYFSPRLATERHRVVEQVGADERALDMFAGVGPFVVPFAQRG--ATAVGVDV 211

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  A+E  + NA  NGV++R   ++ D
Sbjct: 212 NPTAIEYLRENARRNGVADRVTAIEGD 238


>gi|219126021|ref|XP_002183266.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405541|gb|EEC45484.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 315

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 12/87 (13%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG+GTG   + LL   P      +++       A+ +AV  GV++RF T+++  +   
Sbjct: 95  VDLGSGTGGAAIRLLSAHPSLTATCLNLCEAQNATAQQDAVAAGVADRF-TVRTGSYDQA 153

Query: 162 E-----------GLFDVIVSNPPYIES 177
           +           GLFDV  S   ++ S
Sbjct: 154 QALLLPENNKQPGLFDVCFSQDAFVHS 180


>gi|110639089|ref|YP_679298.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354403|sp|Q11RK8|TRMN6_CYTH3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110281770|gb|ABG59956.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406]
          Length = 238

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDW 157
           ILD+GTGTG + L L + S       V+++  A + A  N   +  +ER         D+
Sbjct: 42  ILDIGTGTGLLALMLAQRSN-ADIDAVELNKDAAQQATDNFFNSPWNERLHVHTCSIQDY 100

Query: 158 FSSVEGLFDVIVSNPPYIES 177
           F      +D+IV NPP+  +
Sbjct: 101 FKFTTKQYDLIVCNPPFFSA 120


>gi|323354593|gb|EGA86429.1| YIL064W-like protein [Saccharomyces cerevisiae VL3]
          Length = 257

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 70  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 124

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 125 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWNPGKYDIV------LDKGTLDAISL- 177

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  +   V + L KDG+  +      + ++V+I E+  L +
Sbjct: 178 -----SGMXINGKLDVVDVYAGV---VEKILEKDGIFLITSCNFTQDELVKIIETDNLKM 229

Query: 247 VNAFK 251
               K
Sbjct: 230 WKTIK 234


>gi|319947512|ref|ZP_08021744.1| methyltransferase [Streptococcus australis ATCC 700641]
 gi|319746452|gb|EFV98713.1| methyltransferase [Streptococcus australis ATCC 700641]
          Length = 179

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LDL  G+G + +  +      + V V+   +A  I  SN      S +F  L+ +   
Sbjct: 44  RVLDLYAGSGGLSIEAVSRG-MEQAVLVEKDRRAQGIIASNIQMTKESHKFQLLKMEAHQ 102

Query: 158 -FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDF 190
             S ++G FD++  +PPY  E ++ D   L  RD 
Sbjct: 103 ALSQLQGTFDLVFLDPPYAKEQIVADIEALAERDL 137


>gi|319775089|ref|YP_004137577.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3047]
 gi|329123000|ref|ZP_08251571.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC
           11116]
 gi|317449680|emb|CBY85886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3047]
 gi|327471931|gb|EGF17371.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC
           11116]
          Length = 294

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|307544298|ref|YP_003896777.1| 16S ribosomal RNA methyltransferase [Halomonas elongata DSM 2581]
 gi|307216322|emb|CBV41592.1| 16S ribosomal RNA m2G1207 methyltransferase [Halomonas elongata DSM
           2581]
          Length = 329

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   L +          D++  A+E  +    TNG+    +   SD ++ 
Sbjct: 193 VLDMGCGDGIIAAWLARRG--LAVTAADVNGFAVEATRRTLATNGLEG--EVFHSDVYAG 248

Query: 161 V-EGLFDVIVSNPPYIESVIVD 181
           + +  FD IVSNPP+ +   VD
Sbjct: 249 LPQTRFDAIVSNPPFHQERAVD 270


>gi|302331844|gb|ADL22037.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 243

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R + ++ +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIKEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           ++  +         G FD IV 
Sbjct: 72  QYSDIYQ--LPETMGYFDAIVG 91


>gi|167574672|ref|ZP_02367546.1| NRPS/PKS hybrid [Burkholderia oklahomensis C6786]
          Length = 282

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 18/121 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++GW D Y+           PR E  +  D  LA    RI +R   R+L++G GTG + L
Sbjct: 37  LVGWADSYD-------GAPIPRDEMRMWRDEVLA----RIRERPSRRVLEIGCGTGMLLL 85

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVS 170
            L      F  VG+D S +A+   +      G+     TL       ++GL   FD I+ 
Sbjct: 86  PLAASCERF--VGLDFSAQAIARLRRVVARRGLDTV--TLVERAADELDGLARDFDTIIV 141

Query: 171 N 171
           N
Sbjct: 142 N 142


>gi|77463198|ref|YP_352702.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides 2.4.1]
 gi|77387616|gb|ABA78801.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides 2.4.1]
          Length = 396

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           + + VD S  AL +A++ A   G+ +RF+T Q+D F ++E L      FD+++
Sbjct: 245 RALAVDASGPALALAEAGAKLAGLGDRFETRQADAFQALEALGAEGARFDLVI 297


>gi|50285219|ref|XP_445038.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524341|emb|CAG57938.1| unnamed protein product [Candida glabrata]
          Length = 223

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 9/134 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG-----VGVDISCKALEIAKSNAVTNGVSERF-DTLQ 154
           + ++G G+G V   +++ +    G       +D++  ALE   + A  N   + + + +Q
Sbjct: 46  VCEIGVGSGIVTTFMMQNTIPSAGHLNLYYAIDVNPWALESTLTTADINNCKKSYLEPVQ 105

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD--GGIDGLSHYRTIAD 211
           +D  SS      D+++ NPPY+ +  V  +  E  D D  + L   GG DG+     + D
Sbjct: 106 ADLTSSFRTREIDLLIFNPPYVPAEDVPTIPEETDDQDKWLDLALLGGEDGMDVTNKVLD 165

Query: 212 GVSRHLNKDGLCSV 225
            +   L+  G+  +
Sbjct: 166 NLEAILSLRGVAYI 179


>gi|325335813|gb|ADZ12087.1| Mannose-1-phosphate guanylyltransferase [Riemerella anatipestifer
           RA-GD]
          Length = 344

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           P  E + +D   +E  D    I  D G   L  + ++ D   ++  ++ + S  I  YN 
Sbjct: 244 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 303

Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263
           K +V+R+ ES KL +++  +DY     ++ LL C
Sbjct: 304 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 337


>gi|306821417|ref|ZP_07455022.1| SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550539|gb|EFM38525.1| SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 248

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  + +K D   + DLGTGTG + + +  +S   K   ++I     ++A+ + 
Sbjct: 29  IDAVLLANFVKFKKNDT--LADLGTGTGIIPILVKAKSNIAKIYAIEIQKHIADMARRSV 86

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
             N   +  + L  +   ++  +     D+I +NPPY+
Sbjct: 87  ELNNFQDDIEILNINLKDTLNFIPKYSIDIITTNPPYM 124


>gi|212223826|ref|YP_002307062.1| SAM-dependent methyltransferase [Thermococcus onnurineus NA1]
 gi|212008783|gb|ACJ16165.1| SAM-dependent methyltransferase [Thermococcus onnurineus NA1]
          Length = 272

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 2/56 (3%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +R+V R+LD+  GTGA  L L++    ++ VG+DI+ + L +A+  A    +S  F
Sbjct: 39  RREVRRVLDIACGTGAPTLELVRRG--YEVVGLDINEEMLTVARGKAQREELSVEF 92


>gi|323476892|gb|ADX82130.1| hypothetical protein SiH_0775 [Sulfolobus islandicus HVE10/4]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 16/88 (18%)

Query: 99  VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            R+LD G G G    A++K       E P  + VGV+I  K  E A+     N +S +  
Sbjct: 13  ARVLDAGCGEGVFIEAIIKWYSERGIELP--EIVGVEIDHKLAERARKK--FNNIS-KVK 67

Query: 152 TLQSDWFSSVE----GLFDVIVSNPPYI 175
            ++ D+ +  E    G FD I+SNPPYI
Sbjct: 68  IIEDDFLTVKEEKLGGEFDYIISNPPYI 95


>gi|256826666|ref|YP_003150625.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum
           DSM 15641]
 gi|256582809|gb|ACU93943.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum
           DSM 15641]
          Length = 543

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +TE+L  +AL  +         + ILD   GTG + L    + P  + +G+D +  ++  
Sbjct: 368 QTEVLYRTALEMAAC-TSSHQALTILDAYCGTGTIGLVAASQVPNSQVIGIDNASSSIRD 426

Query: 137 AKSNAVTNGVS 147
           A+ NAV NG++
Sbjct: 427 ARQNAVHNGIA 437


>gi|225027843|ref|ZP_03717035.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353]
 gi|224954790|gb|EEG35999.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353]
          Length = 560

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 12/122 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +   YN+R  +S  +F        E+L D    +     E +D + I DL TGTG +   
Sbjct: 286 YEYLYNMRFKISPFSFFQTNTLGAEVLYDKVREYVG---ETKDKL-IYDLYTGTGTIAQM 341

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSN 171
           L   S   K VGV+I  +A+E AK NAV N + +  + +  D    V+ L    D++V +
Sbjct: 342 LA--SVASKVVGVEIVEEAVEAAKKNAVDNHL-DNCEFIAGDVLKVVDNLTKKPDILVLD 398

Query: 172 PP 173
           PP
Sbjct: 399 PP 400


>gi|225016200|ref|ZP_03705392.1| hypothetical protein CLOSTMETH_00103 [Clostridium methylpentosum
           DSM 5476]
 gi|224951022|gb|EEG32231.1| hypothetical protein CLOSTMETH_00103 [Clostridium methylpentosum
           DSM 5476]
          Length = 371

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIV 169
            L L++    FK  G DI  +A+E+++ NA   GV  R    Q D  S+ E   +  +++
Sbjct: 242 ALDLIRRDAEFKAFGFDIDMQAVELSRDNAKKAGVLPRIRFAQGD-ISNFEPSEEKGIVI 300

Query: 170 SNPPYIESVI 179
            NPPY E ++
Sbjct: 301 CNPPYGERML 310


>gi|154492216|ref|ZP_02031842.1| hypothetical protein PARMER_01850 [Parabacteroides merdae ATCC
           43184]
 gi|154087441|gb|EDN86486.1| hypothetical protein PARMER_01850 [Parabacteroides merdae ATCC
           43184]
          Length = 194

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           L R   R  +RILD+G GTG +   LL  SP  + VGVDIS   +E A+S   T
Sbjct: 30  LRRTGLRKGLRILDIGCGTGVLESYLLPYSP-LQIVGVDISPGMIEKARSKYAT 82


>gi|11993696|gb|AAG42853.1|AF323753_8 SnogM [Streptomyces nogalater]
          Length = 278

 Score = 37.4 bits (85), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           RIE     R+LD+G GTGA  + L + +   + VG+ IS + + +A ++A   GV+ER
Sbjct: 58  RIEVGPGQRVLDIGCGTGAPAVQLARAT-GAEVVGITISPEQVRLATAHAEREGVAER 114


>gi|328948517|ref|YP_004365854.1| hypothetical protein Tresu_1660 [Treponema succinifaciens DSM 2489]
 gi|328448841|gb|AEB14557.1| protein of unknown function Met10 [Treponema succinifaciens DSM
           2489]
          Length = 415

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD  T TGA  L  +K     + V VDIS +A+++ + N   NG  E+   + +D F 
Sbjct: 243 KVLDTFTHTGAFGLNAVKAGAR-EVVSVDISQEAVDMVEKNISLNGAEEKMKAVCADVFD 301

Query: 160 SVEGL------FDVIVSNPP 173
            ++        FDVI+ +PP
Sbjct: 302 LLKQYEASGEKFDVIILDPP 321


>gi|282883188|ref|ZP_06291787.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis
           315-B]
 gi|281297000|gb|EFA89497.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis
           315-B]
          Length = 301

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +L +  K+D+  I D+G G+G + +A +K         VDI  K ++ ++ NA  N V +
Sbjct: 157 ALDKYVKKDM-NIFDIGCGSGILGIAAIKLGGK-SATLVDIDDKCIKASEENAKLNEVYD 214

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +    + +    +EG  D+IVSN   I  +IVD
Sbjct: 215 KVKVKKGNLLDVIEGKCDIIVSN--IIAEIIVD 245


>gi|256841381|ref|ZP_05546888.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Parabacteroides
           sp. D13]
 gi|256737224|gb|EEU50551.1| 2-heptaprenyl-1,4-naphthoquinone methyltransferase [Parabacteroides
           sp. D13]
          Length = 247

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122
           F+   ET   ++  L+F + +I +R  +          ILD+ TGTG + +++ K+    
Sbjct: 26  FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170
             +G DIS   +E+ +      G SE     Q D    +  E  FD + +
Sbjct: 86  HIIGADISLGMMEVGRKKVAAAGYSEHISFEQQDCTALTYEENSFDAVTA 135


>gi|167042826|gb|ABZ07544.1| putative ribosomal protein L11 methyltransferase (PrmA) [uncultured
           marine microorganism HF4000_ANIW137I15]
          Length = 337

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G+G + +A  K  P  +   +DI   A    + NA  N V+ R  T++     
Sbjct: 201 RVLDIGCGSGILGIAAAKWFPRCRVTSIDIDPGAYHATRDNARKNRVAGRM-TVREGSLE 259

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              G F +I++N  Y+E  + D  GL  R  +
Sbjct: 260 RTRGKFGLILAN-LYLEP-LRDLAGLMARRLE 289


>gi|182412125|ref|YP_001817191.1| methyltransferase type 11 [Opitutus terrae PB90-1]
 gi|177839339|gb|ACB73591.1| Methyltransferase type 11 [Opitutus terrae PB90-1]
          Length = 380

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 3/51 (5%)

Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +LDLG+GTG +C +A     P  + +GVD++ + LE+A+ NA    V+ER 
Sbjct: 60  VLDLGSGTGKICFIAAQVVGPQGRVIGVDMTDEMLEVARRNAPV--VAERL 108


>gi|170289229|ref|YP_001739467.1| methyltransferase type 11 [Thermotoga sp. RQ2]
 gi|170176732|gb|ACB09784.1| Methyltransferase type 11 [Thermotoga sp. RQ2]
          Length = 248

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +FY+ R+  + D+    P+ +L   L+ S L   L     ++  R+LDLG GTG   L L
Sbjct: 7   EFYD-RIARAYDSMYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTGKWSLFL 60

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDVI 168
            +    F+ V VD S + LE+A+   V N V  + + L   S  F +V  L DV+
Sbjct: 61  QERG--FEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVL 113


>gi|146277230|ref|YP_001167389.1| putative RNA methylase [Rhodobacter sphaeroides ATCC 17025]
 gi|145555471|gb|ABP70084.1| SAM-dependent methyltransferase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 427

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIV 169
           + + VD S  AL +A++ A   G+ ERF+T Q D F  +E L      FD+++
Sbjct: 276 RALAVDASGPALALAEAGAKLAGLGERFETRQGDAFQVLEALGADGARFDLVI 328


>gi|319897511|ref|YP_004135708.1| ribosomal protein l11 methyltransferase [Haemophilus influenzae
           F3031]
 gi|317433017|emb|CBY81388.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3031]
          Length = 294

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|297571643|ref|YP_003697417.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931990|gb|ADH92798.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595]
          Length = 187

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 36/142 (25%)

Query: 93  IEKRDVVR---ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +E RD V    +LDL  G+GA+ L  L      + +GVD + +A+    +NA    +   
Sbjct: 36  LEHRDFVDGCDVLDLFAGSGALALEALSRG-ATRAIGVDSAEEAIRAMNANARETQLP-- 92

Query: 150 FDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              ++S   + V     +G FDVI+ +PPY              DF      D  +  + 
Sbjct: 93  LKAIKSQVLTYVSQPGTDGPFDVIILDPPY--------------DFP-----DDSLTAIL 133

Query: 205 HYRTIADGVSRHLNKDGLCSVE 226
           H       + RHL  DGL  VE
Sbjct: 134 HE------LPRHLKSDGLVVVE 149


>gi|256027760|ref|ZP_05441594.1| methyltransferase [Fusobacterium sp. D11]
 gi|289765717|ref|ZP_06525095.1| methyltransferase [Fusobacterium sp. D11]
 gi|289717272|gb|EFD81284.1| methyltransferase [Fusobacterium sp. D11]
          Length = 182

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 10/126 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+  +   F+ RP  E + +S  +   P I K  V   LDL +G+G++ L  +      +
Sbjct: 11  RIIKTRKGFDTRPTLESVKESLFSIITPYI-KGSV--FLDLFSGSGSISLEAISRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            V ++   +AL+    N    G S+R    ++D   ++E L      FD+I  +PPY ++
Sbjct: 67  AVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVVRAIEILGRKNEKFDIIFMDPPYQDN 126

Query: 178 VIVDCL 183
           V    L
Sbjct: 127 VTKKVL 132


>gi|295835991|ref|ZP_06822924.1| methyltransferase type 12 [Streptomyces sp. SPB74]
 gi|197699359|gb|EDY46292.1| methyltransferase type 12 [Streptomyces sp. SPB74]
          Length = 525

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 69  SDTFEPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           ++T EP P     L     A  L  +      R+LDLG G G +   LLK+  F   + +
Sbjct: 293 TETGEPGPSRPATLASHRRAAILEALRAAHAARVLDLGCGEGTLVSELLKDPRFTHVLAM 352

Query: 128 DISCKALEIAKSNAVTNGVSER 149
           D+S +AL+IA      + + ER
Sbjct: 353 DVSQRALQIAARRLHVDRMPER 374


>gi|209548146|ref|YP_002280063.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533902|gb|ACI53837.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 419

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RIL++G+G G + + L + +   +  G+ +S + L++++S A   G++ER      D+ +
Sbjct: 176 RILEIGSGWGGMGMYLTEATEGAEFTGITLSEEQLKVSRSRAEKRGLAERVRFELQDYRT 235

Query: 160 SVEGLFDVIVS 170
                FD IVS
Sbjct: 236 LTGRKFDRIVS 246


>gi|160934888|ref|ZP_02082274.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753]
 gi|156866341|gb|EDO59713.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753]
          Length = 246

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 14/113 (12%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L ++T     +T LL D    F LP   K+ V    +LG G GA+ +  L+E P      
Sbjct: 18  LVNETHHFGTDTILLAD----FCLPVKGKQAV----ELGAGCGAISMIWLREQPPAHITA 69

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174
           V+I  +A+++ +     N   E    L+ D    ++     G  D++  NPPY
Sbjct: 70  VEIQEEAVDLLRRTVKYNEKEELVTVLRED-LRQLQGKLPMGAMDLVACNPPY 121


>gi|330508804|ref|YP_004385232.1| methyltransferase [Methanosaeta concilii GP-6]
 gi|328929612|gb|AEB69414.1| methyltransferase, putative [Methanosaeta concilii GP-6]
          Length = 277

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFFKGVGVDISCKAL 134
           PE+ L +      +L  + + ++V  LD+G+G G  C LA  +  P  K +GVDI+ + +
Sbjct: 59  PESNLGLGCGNPVALASLSEGEIV--LDMGSGAGFDCFLASDRVGPSGKVIGVDITSEMV 116

Query: 135 EIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           E A++N+   G +   D  Q D       +   DV++SN
Sbjct: 117 EKARANSRKGGYA-NIDFRQGDLENMPVADNYVDVVISN 154


>gi|327467251|gb|EGF12755.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus sanguinis SK330]
          Length = 533

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E      + D   G+G++ L   K S   + V   G +
Sbjct: 199 YTPQPVAKLM--TQIAF-LGR-EDEQGFTLYDATMGSGSLLLNAKKYSHQPQTVQYFGQE 254

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 255 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 306


>gi|325690228|gb|EGD32232.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK115]
          Length = 182

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL +G+G + +  +        + V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDLYSGSGGLAIEAISRG-METAILVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLE-----------VRDFDPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE           V + +  + L   I GL 
Sbjct: 106 ALEMLTGAFDLVLLDPPYAKEQIVADLEKLEEGQLLSQDVLVVCETEKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|307353043|ref|YP_003894094.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307156276|gb|ADN35656.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
          Length = 242

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           D++N R T   + F    + E+ V    L+  +P   +   +R  ++GTG G + LAL  
Sbjct: 13  DYWNWRSTTYHEEFSDLIKEEMEVWKKTLSEYIP---EGKTIRAAEIGTGPGVLALALAD 69

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP----- 172
                   GVD+S + ++ A + A   G+  +F    ++  S  +G +D+++S       
Sbjct: 70  LG--HSATGVDLSEEMIKKAANRAEELGIDAKFMQGDAENLSLDDGAYDLVISKYLMWTL 127

Query: 173 PYIESVIVDC 182
           P+ E  + +C
Sbjct: 128 PHPEKFLEEC 137


>gi|170029884|ref|XP_001842821.1| HemK methyltransferase family member 2 [Culex quinquefasciatus]
 gi|167864803|gb|EDS28186.1| HemK methyltransferase family member 2 [Culex quinquefasciatus]
          Length = 222

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 102 LDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           L++G G+G +  AL K       F  +GVDI+ KA  +       N      D +  D  
Sbjct: 46  LEIGPGSGIIISALAKVLANGALF--LGVDINPKACRMTARTREMNECP--VDVVNMDLV 101

Query: 159 SS-VEGLFDVIVSNPPYIESVIVDC---LGLEVRDFDPRI-----SLDGGIDGLSHYRTI 209
              V G+ D++V NPPY+ +   DC   L   +  F   +     S  GG DG++    +
Sbjct: 102 GGFVPGVVDLLVFNPPYVPTSEEDCPKELEEHIGQFGEGLHDLVKSWAGGCDGMAVTNRV 161

Query: 210 ADGVSRHLNKDGL 222
              + R L+ +G+
Sbjct: 162 LATLDRILSPEGV 174


>gi|118463092|ref|YP_883670.1| methyltransferase small domain-containing protein [Mycobacterium
           avium 104]
 gi|254776972|ref|ZP_05218488.1| methyltransferase small domain-containing protein [Mycobacterium
           avium subsp. avium ATCC 25291]
 gi|118164379|gb|ABK65276.1| methyltransferase small domain family protein [Mycobacterium avium
           104]
          Length = 249

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155
           +LDLG G GAV LA  K  P  + +GVD+     +  + +   +NA   GV++R +   +
Sbjct: 93  LLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSEQATLANAAAEGVADRVELHTA 152

Query: 156 DW--FSSVEGLFDVIVSN 171
           D       +   DV+VSN
Sbjct: 153 DMTALPLADESVDVVVSN 170


>gi|86738912|ref|YP_479312.1| N-6 DNA methylase [Frankia sp. CcI3]
 gi|86565774|gb|ABD09583.1| N-6 DNA methylase [Frankia sp. CcI3]
          Length = 583

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 19/131 (14%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALL 116
           R F       S D + PR    LLVD   A     + +  +VR L D   GTG + LAL 
Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAEKEADLSEAGIVRTLYDPTAGTGGM-LALA 216

Query: 117 KESPFFKGVGVDIS-------------CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +E    +    ++S             CK+  +AK +  TN      +TL  D F   + 
Sbjct: 217 EEHLLAQNPDANLSLYGQEYNPQSYAICKSDLLAKGHDATNIAFG--NTLTDDAFKGRK- 273

Query: 164 LFDVIVSNPPY 174
            FD  +SNPPY
Sbjct: 274 -FDFCMSNPPY 283


>gi|41410195|ref|NP_963031.1| hypothetical protein MAP4097 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41399029|gb|AAS06647.1| hypothetical protein MAP_4097 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 257

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQS 155
           +LDLG G GAV LA  K  P  + +GVD+     +  + +   +NA   GV++R +   +
Sbjct: 101 LLDLGCGRGAVLLAAAKRLPRGRAIGVDLWQADQTDNSEQATLANAAAEGVADRVELHTA 160

Query: 156 DW--FSSVEGLFDVIVSN 171
           D       +   DV+VSN
Sbjct: 161 DMTALPLADESVDVVVSN 178


>gi|312883994|ref|ZP_07743711.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368452|gb|EFP95987.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+D+     LP I+ +    +LD G G G +   + K +P  +    DIS  AL +A
Sbjct: 190 SQLLLDN-----LPDIDGK----VLDFGCGAGVIGCVIAKLNPDIELEMCDIS--ALAVA 238

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            S A         +   SD +S     +  IVSNPP+
Sbjct: 239 SSQATLERNQLNGNVFASDVYSDTGSDYHFIVSNPPF 275


>gi|296118142|ref|ZP_06836723.1| pyridine nucleotide-disulfide oxidoreductase domain protein
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968700|gb|EFG81944.1| pyridine nucleotide-disulfide oxidoreductase domain protein
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 583

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           RI++LG+GTG   +AL +  P      VDIS + L+     A   GV ER    Q+D
Sbjct: 51  RIVELGSGTGDNVIALAQRFPHADVHAVDISSELLDTVSVAATQAGVRERVRLHQAD 107


>gi|256375106|ref|YP_003098766.1| N-6 DNA methylase [Actinosynnema mirum DSM 43827]
 gi|255919409|gb|ACU34920.1| N-6 DNA methylase [Actinosynnema mirum DSM 43827]
          Length = 677

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG--VDISCKALEIAKSNAVTNGVSERF-DTLQSDW 157
           + D   GTGA+  A ++  P  + VG  +D S   + IA+        S R  D+L++D 
Sbjct: 160 VFDPACGTGALLRAAVRSEPGIRPVGQELDPSLAQVAIARLAFAAGEASVRSGDSLRNDA 219

Query: 158 FSSVEGLFDVIVSNPPY 174
           F  +  + DV+VSNPP+
Sbjct: 220 FPEL--VADVVVSNPPF 234


>gi|241895464|ref|ZP_04782760.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Weissella paramesenteroides ATCC 33313]
 gi|241871438|gb|EER75189.1| site-specific DNA-methyltransferase (adenine-specific), HsdM
           subunit [Weissella paramesenteroides ATCC 33313]
          Length = 517

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQ 154
           + D   G+G++ L +   +      G +++     + + N + +GVS      ++ DTL+
Sbjct: 228 VYDPTMGSGSLLLRIGDYATVGNYYGQELNRTTYNLGRMNLLMHGVSYNQFSVQQGDTLE 287

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
           +D+F   +  FD +V+NPPY
Sbjct: 288 NDYFEGQQ--FDAVVANPPY 305


>gi|164688031|ref|ZP_02212059.1| hypothetical protein CLOBAR_01676 [Clostridium bartlettii DSM
           16795]
 gi|164602444|gb|EDQ95909.1| hypothetical protein CLOBAR_01676 [Clostridium bartlettii DSM
           16795]
          Length = 524

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERF----- 150
           DV+   D   G+G++ L L K +      G +++     +A+ N + +GV  + F     
Sbjct: 223 DVLSAADPTCGSGSLLLRLNKYANVRTFFGQELTSTTYNLARMNMILHGVPYQNFTIYNG 282

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPY 174
           DTL+ D F   E  F + V+NPPY
Sbjct: 283 DTLEEDHFE--ENKFRIQVANPPY 304


>gi|326498625|dbj|BAK02298.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 403

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 14/86 (16%)

Query: 74  PRPE-TELLVDSALAFS--------LPRIEKRDVVR----ILDLGTGTGAVCLALLKESP 120
           P P+ T +++D  LAF         L  +  RD ++    +LD GTGTG + +A LK   
Sbjct: 205 PDPQATNIIIDPGLAFGTGEHPTTKLCLLFLRDAIKGGEHVLDYGTGTGVLGIAALKMGA 264

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV 146
                G+DI  +A+  A+ N + NG+
Sbjct: 265 ALS-TGIDIDPQAVSSARQNMLLNGM 289


>gi|302880075|ref|YP_003848639.1| 50S ribosomal protein L11 methyltransferase [Gallionella
           capsiferriformans ES-2]
 gi|302582864|gb|ADL56875.1| ribosomal protein L11 methyltransferase [Gallionella
           capsiferriformans ES-2]
          Length = 297

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +A +K       VGVD+  +A+  ++ NA  N V E    L +    
Sbjct: 167 RVLDYGCGSGILAIAAIKLG-AAHAVGVDVDAQAVTASRDNATANDVHEVAFYLPN---Q 222

Query: 160 SVEGLFDVIVSN 171
           +  G +D++V+N
Sbjct: 223 APGGQYDLVVAN 234


>gi|241763998|ref|ZP_04762038.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN]
 gi|241366672|gb|EER61137.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN]
          Length = 220

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 32/71 (45%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D G GTG + L      P  +  GVD     L +A+  A +     RFD   S +   
Sbjct: 50  VSDAGCGTGTLALLAATACPQARVTGVDADPAILSLARRKAASVAAPIRFDEGLSTYLPY 109

Query: 161 VEGLFDVIVSN 171
            +G FD +VS+
Sbjct: 110 GDGSFDRVVSS 120


>gi|227830362|ref|YP_002832142.1| methylase [Sulfolobus islandicus L.S.2.15]
 gi|227456810|gb|ACP35497.1| methylase [Sulfolobus islandicus L.S.2.15]
          Length = 207

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G   
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   ++     F  +    +   L   K N + N        L  D  S +    FDV +
Sbjct: 54  IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
            NPPY          L V +++  I  S  GG DG
Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|261400540|ref|ZP_05986665.1| ribosomal protein L11 methyltransferase [Neisseria lactamica ATCC
           23970]
 gi|269209607|gb|EEZ76062.1| ribosomal protein L11 methyltransferase [Neisseria lactamica ATCC
           23970]
          Length = 245

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   + L S  
Sbjct: 117 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRAGRDNAAQNNVDAQFYLPEQLPS-- 173

Query: 158 FSSVEGLFDVIVSN 171
                G FDV+V+N
Sbjct: 174 -----GQFDVVVAN 182


>gi|169627497|ref|YP_001701146.1| methyltransferase [Mycobacterium abscessus ATCC 19977]
 gi|169239464|emb|CAM60492.1| Possible methyltransferase [Mycobacterium abscessus]
          Length = 232

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 13/98 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE  +L+           E +    +LD G G  A  L L +       VG+D + K
Sbjct: 36  EPQPEIAMLI----------AEGKVRGEVLDAGCGEAATSLYLAEVG--HTTVGLDSAPK 83

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV 169
           A+E+AK  A   G++   F       F+  +G FD I+
Sbjct: 84  AIELAKGYAAERGLTNASFAVADISSFTGYDGRFDTII 121


>gi|67923204|ref|ZP_00516691.1| UbiE/COQ5 methyltransferase [Crocosphaera watsonii WH 8501]
 gi|67854935|gb|EAM50207.1| UbiE/COQ5 methyltransferase [Crocosphaera watsonii WH 8501]
          Length = 199

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LDLG GTG +   L K  P  KG+GVD+S + L+ A+
Sbjct: 48  VLDLGCGTGRLLNRLAKNFPELKGIGVDLSPQMLKEAR 85


>gi|226946159|ref|YP_002801232.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ]
 gi|226721086|gb|ACO80257.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ]
          Length = 333

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L R++      +LD G G G +   L +  P  + + +D+   AL  ++   
Sbjct: 176 LDRGTALLLERLDGLPPGDLLDFGCGAGVLGALLKRRYPQSRVILLDVDAFALASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG+  +  T+  D           IVSNPP+ + V  D
Sbjct: 236 AANGLEAQ--TIAGDGIRDAPDGLAAIVSNPPFHQGVHTD 273


>gi|196231067|ref|ZP_03129927.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428]
 gi|196224897|gb|EDY19407.1| Methyltransferase type 12 [Chthoniobacter flavus Ellin428]
          Length = 258

 Score = 37.4 bits (85), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RIL++G G G +C  + +  P  + VG+DIS +++E A+       +S     L+     
Sbjct: 47  RILEIGCGVGDICWRMRRRWPESEVVGLDISARSIETARRLFGDEKLSFVEGELKP---G 103

Query: 160 SVEGLFDVIV 169
           +V G FD+IV
Sbjct: 104 TVHGPFDLIV 113


>gi|323304494|gb|EGA58260.1| YIL064W-like protein [Saccharomyces cerevisiae FostersB]
          Length = 249

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 22/185 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SD+   +   + LVD+  A+   RI +     ++DLGTG G +   L +     K VG+D
Sbjct: 62  SDSDAEQKMIDFLVDNIGAY---RISEN--ASVVDLGTGNGHMLFELHQTEFQGKLVGID 116

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLE 186
            S +++++A + A   GV       Q+D FS     G +D++      ++   +D + L 
Sbjct: 117 YSEESVKLASNIAEATGVDNFISFQQADIFSGDWXPGKYDIV------LDKGTLDAISL- 169

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                  + ++G +D +  Y  + + +   L KDG+  +      + ++V+I E+  L +
Sbjct: 170 -----SGMKINGKLDVVDVYAGVVEXI---LXKDGIFLITSCNFTQDELVKIIETDNLKM 221

Query: 247 VNAFK 251
               K
Sbjct: 222 WKTIK 226


>gi|318059292|ref|ZP_07978015.1| methyltransferase [Streptomyces sp. SA3_actG]
 gi|318078486|ref|ZP_07985818.1| methyltransferase [Streptomyces sp. SA3_actF]
          Length = 516

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +  R+LDLG G G +   LLK++ F   + +D+S +AL+IA      + + ER
Sbjct: 318 NATRVLDLGCGEGTLVRELLKDTRFTHVLAMDVSQRALQIAARRLRVDRMPER 370


>gi|313206748|ref|YP_004045925.1| mannose-1-phosphate guanylyltransferase (gdp) [Riemerella
           anatipestifer DSM 15868]
 gi|312446064|gb|ADQ82419.1| mannose-1-phosphate guanylyltransferase (GDP) [Riemerella
           anatipestifer DSM 15868]
          Length = 362

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           P  E + +D   +E  D    I  D G   L  + ++ D   ++  ++ + S  I  YN 
Sbjct: 244 PKAEKISIDNGIMEKADNVYVIPADLGWSDLGTWNSVYDNAEKNDEQNSINSKYILTYNS 303

Query: 232 KVDVVRIFESRKLFLVNAFKDY--GGNDRVLLFC 263
           K +V+R+ ES KL +++  +DY     ++ LL C
Sbjct: 304 KGNVIRLKESNKLAIIDGLQDYIVVDTEKALLIC 337


>gi|323343167|ref|ZP_08083398.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463231|gb|EFY08426.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 194

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 17/80 (21%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAV---TNGVSERFDTL 153
           ++ DLG G G V + L   S FF  +   GVD++ +++E+A  N      NG+++  D L
Sbjct: 60  KVADLGCGIGVVGVIL---SHFFSDLEMTGVDVNPRSVELANINYEKYNVNGINKIQDGL 116

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
                   +G++D ++SNPP
Sbjct: 117 --------DGMYDFVISNPP 128


>gi|302522464|ref|ZP_07274806.1| methyltransferase type 12 [Streptomyces sp. SPB78]
 gi|302431359|gb|EFL03175.1| methyltransferase type 12 [Streptomyces sp. SPB78]
          Length = 516

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +  R+LDLG G G +   LLK++ F   + +D+S +AL+IA      + + ER
Sbjct: 318 NATRVLDLGCGEGTLVRELLKDTRFTHVLAMDVSQRALQIAARRLRVDRMPER 370


>gi|315231215|ref|YP_004071651.1| UbiE/COQ5-like methyltransferase [Thermococcus barophilus MP]
 gi|315184243|gb|ADT84428.1| UbiE/COQ5-like methyltransferase [Thermococcus barophilus MP]
          Length = 247

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 57  WRDFYN--VRLTLSSD-TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W DF++   R  L    T   + E E L++    F LP+       +ILD+G G G   +
Sbjct: 6   WEDFFDREARHYLKEPFTKHTKEEVEFLLNE---FQLPK-----GAKILDVGCGVGRHSI 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            L K    ++  G+DIS   LE A+  A   GV   F
Sbjct: 58  ELAKRG--YRVTGIDISQGMLEEARKRAQKEGVEVEF 92


>gi|89052980|ref|YP_508431.1| methyltransferase small [Jannaschia sp. CCS1]
 gi|88862529|gb|ABD53406.1| methyltransferase small [Jannaschia sp. CCS1]
          Length = 247

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 20/120 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F N R+      ++PR       D   LA + P      V   L+LG G G   L L   
Sbjct: 16  FLNGRVM----AWQPRKGYRAATDPVFLAAACPATTGESV---LELGCGVGVAALCLQAR 68

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            P  +  GV+      ++A+ N V        D +Q+D  S    L    FD +++NPPY
Sbjct: 69  VPGVEVTGVERQAAYADLARRNGV--------DVVQADLTSLPTALRQRSFDHVIANPPY 120


>gi|323455833|gb|EGB11701.1| hypothetical protein AURANDRAFT_2373 [Aureococcus anophagefferens]
          Length = 394

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSD 156
           +LDL   +G   L   K     +  GVD S  A+++A+ NA  NG+     E  D   S 
Sbjct: 227 VLDLYCYSGGFALNAAKHGAT-EARGVDSSATAVDLARRNAAANGLDACAFEEADV--SA 283

Query: 157 WFSSVEGLFDVIVSNPPYI 175
           W  + +  +DV+V +PP +
Sbjct: 284 WLKASDARYDVVVCDPPKL 302


>gi|313674919|ref|YP_004052915.1| 23S rRNA m(5)u-1939 methyltransferase [Marivirga tractuosa DSM
           4126]
 gi|312941617|gb|ADR20807.1| 23S rRNA m(5)U-1939 methyltransferase [Marivirga tractuosa DSM
           4126]
          Length = 466

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 15/114 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A+ L ++  RD         + DL TGTG +   L K +   K +
Sbjct: 289 FKIGPKSFYQTNSDQAYELYKV-ARDFANLKGEETVYDLYTGTGTIANFLAKSAK--KVI 345

Query: 126 GVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSS---VE-GLFDVIVSNPP 173
           GV+   +A+E AK N+  N +  +E F     D F+    VE G  DVI+++PP
Sbjct: 346 GVEYVTEAIEDAKVNSKLNEIENTEFFSGDMKDVFNDEFLVEHGKADVIITDPP 399


>gi|288924992|ref|ZP_06418928.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
 gi|288338182|gb|EFC76532.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
          Length = 288

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T ++V + L   L      D  RILD G GTG + +A  K     + VG DI   ++E  
Sbjct: 139 TRMMVSTLLNMDL------DGKRILDCGCGTGILGIAAAKMGA-REVVGYDIDEWSVENT 191

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           + NA  N V E  +    D    + V GLFDV+++N
Sbjct: 192 RHNAELNHV-ENLEVYHGDAHVLNHVNGLFDVVLAN 226


>gi|257388443|ref|YP_003178216.1| methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
 gi|257170750|gb|ACV48509.1| Methyltransferase type 11 [Halomicrobium mukohataei DSM 12286]
          Length = 210

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +LDLGTGTGA+ L L   +   + VG DIS   LE A++ A   G+
Sbjct: 47  VLDLGTGTGAIALPLADAAA--EVVGRDISEGMLEQARTKATERGI 90


>gi|89075352|ref|ZP_01161774.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34]
 gi|89048901|gb|EAR54470.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34]
          Length = 294

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +L+D  LAF           L  ++ +D+    ++D G G+G + +A LK   
Sbjct: 123 PEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGCGSGILAIAALKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             K +G+DI  +A+  ++ NA  NGVS+  +  L  D    ++   D++V+N
Sbjct: 182 AEKVIGIDIDPQAILASRDNAERNGVSDNLELYLPQDQPQGIQA--DIVVAN 231


>gi|315586430|gb|ADU40811.1| type I restriction enzyme M protein [Helicobacter pylori 35A]
          Length = 543

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 21/96 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNG 145
           E    V+I D   GTG + +AL  +      +G D        IS K+L++ K N + N 
Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLKMLKLNLILND 279

Query: 146 VSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           ++         +TL + + S   +G  D IVSNPP+
Sbjct: 280 LTHSLKYAIEGNTLTNPYHSKKCKGEMDYIVSNPPF 315


>gi|229542669|ref|ZP_04431729.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1]
 gi|229327089|gb|EEN92764.1| RNA methyltransferase, TrmA family [Bacillus coagulans 36D1]
          Length = 457

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF-EPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F +  P +T++L + AL ++    E      ++D   G G + L L +++
Sbjct: 276 DIKFAISAPSFYQVNPVQTKVLYEKALEYA----ELTGSETVIDAYCGIGTISLFLAQKA 331

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173
              K  GV+I  +A+E AK NA  NG++         +T+   W+ +     DV+V +PP
Sbjct: 332 --RKVFGVEIVPEAIEDAKRNAALNGITNVEFEAGTAETVIPKWYEAGNKA-DVLVVDPP 388


>gi|333025546|ref|ZP_08453610.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071]
 gi|332745398|gb|EGJ75839.1| putative methyltransferase type 12 [Streptomyces sp. Tu6071]
          Length = 308

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            I+DLG+GTGA   ALL   P      VD S   L+  +  A   G+  R  T+ +D
Sbjct: 81  HIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 137


>gi|323701207|ref|ZP_08112882.1| Eco57I restriction endonuclease [Desulfotomaculum nigrificans DSM
           574]
 gi|323533809|gb|EGB23673.1| Eco57I restriction endonuclease [Desulfotomaculum nigrificans DSM
           574]
          Length = 493

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 29/101 (28%)

Query: 99  VRILDLGTGTGAVCLALL----KESPFFKGVGVDIS--------------------CKAL 134
           + ILD G GTG + LAL+    KES F K + VD+                     C   
Sbjct: 51  ISILDPGAGTGLLTLALIEKIIKES-FVKHISVDLFENDESLLPVLEENLRLIQEFCSQK 109

Query: 135 EIAKSNAVTNGVSERFDTLQSD-WFSSVEGLFDVIVSNPPY 174
           E+     + N   E F +   D W    E  +D+I+ NPPY
Sbjct: 110 EVHLIYKIYN---ENFISYNQDCWTEECEPKYDIIIGNPPY 147


>gi|261403896|ref|YP_003240137.1| methyltransferase small [Paenibacillus sp. Y412MC10]
 gi|261280359|gb|ACX62330.1| methyltransferase small [Paenibacillus sp. Y412MC10]
          Length = 255

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I +R   RILD+ TG G + + LL         G++I  +  ++A+ + 
Sbjct: 35  MDAVLLARFASIPRRG--RILDMCTGNGVIPI-LLSTRTGAPIEGIEIQPRLADMARRSV 91

Query: 142 VTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYI 175
           V N + ++    + D    +     G +D+I  NPPY+
Sbjct: 92  VMNDLQDQITIHEGDLRELYKEKGYGAYDLITVNPPYM 129


>gi|255721473|ref|XP_002545671.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136160|gb|EER35713.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 222

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI---SCKA-LEIAKSNAVTNGVSER 149
           K  +  + ++GTG+G V   + K   P    +  DI   +CK  +E  + N      +  
Sbjct: 41  KESIPFVTEIGTGSGIVTTFIAKNVLPKAMFLATDINPHACKTVIETMRCNKENPQDAYL 100

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSH 205
            D+ Q    S+V     D++V NPPY+ +   +   +  +D DP    ++L GG DG+  
Sbjct: 101 IDSTQMSLTSAVRPHTIDILVFNPPYVPA--SEIPEIPTQDEDPVWLDLALVGGEDGMVV 158

Query: 206 YRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESR 242
              + D + + L+ +G+  +     N+   V  I   R
Sbjct: 159 TWKVLDCLEQTLSSNGIAYILFCARNKPESVAEIMRER 196


>gi|237737638|ref|ZP_04568119.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229419518|gb|EEO34565.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 309

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 13/104 (12%)

Query: 101 ILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDW 157
           ++D+GTG+G + +A   L  S  +   G DI   A+E AK N   N +S E+    + D 
Sbjct: 175 VIDVGTGSGILMIAADRLGASEIY---GTDIDELAVESAKENLELNKISEEKAKVYKGDL 231

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            S VE   FDV+V+N      ++ D L + + D    +  +G I
Sbjct: 232 ISVVENKKFDVVVAN------ILADVLLILLHDISKVVKPNGKI 269


>gi|253702090|ref|YP_003023279.1| methyltransferase small [Geobacter sp. M21]
 gi|251776940|gb|ACT19521.1| methyltransferase small [Geobacter sp. M21]
          Length = 266

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R  DLGTG G + L L +         V+       IA  N + NG+S R + ++ D  S
Sbjct: 63  RCADLGTGCGVIALLLARLGENSSVAAVEFQQVMARIAARNVILNGLSGRVEVVEEDVVS 122

Query: 160 SVEGL----FDVIVSNPPY 174
                    FD++VSNPPY
Sbjct: 123 VKSRFPVDSFDLVVSNPPY 141


>gi|160879469|ref|YP_001558437.1| methyltransferase [Clostridium phytofermentans ISDg]
 gi|160428135|gb|ABX41698.1| methyltransferase [Clostridium phytofermentans ISDg]
          Length = 185

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL +G+GA+ +  L     F  V  D S  A++  K+N  T  +  + +  Q D  S++
Sbjct: 46  LDLFSGSGAIGIEALSRGASF-AVFSDTSKTAVDCIKANIKTTHMEGQAEVFQKDAISTI 104

Query: 162 EGL------FDVIVSNPPY---IESVIVDCL 183
           + +      F +I  +PPY    E +I++ L
Sbjct: 105 KAMEVAGKVFQIIFMDPPYNCDHEKIILEML 135


>gi|15643516|ref|NP_228562.1| ubiquinone/menaquinone biosynthesis methyltransferase, putative
           [Thermotoga maritima MSB8]
 gi|37999908|sp|Q9WZL2|UBIE_THEMA RecName: Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|4981280|gb|AAD35835.1|AE001745_2 ubiquinone/menaquinone biosynthesis methyltransferase, putative
           [Thermotoga maritima MSB8]
          Length = 229

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 26/40 (65%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           ++LDL TGTG V   L +++P  +  G+D S K LEIA+ 
Sbjct: 50  KVLDLATGTGDVARLLKRKAPHLEITGLDSSSKMLEIAEK 89


>gi|116627584|ref|YP_820203.1| type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus LMD-9]
 gi|116100861|gb|ABJ66007.1| Type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus LMD-9]
          Length = 534

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    + D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|323497938|ref|ZP_08102947.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
 gi|323316983|gb|EGA69985.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
          Length = 376

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 18/157 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQS--- 155
           +++DLG G G + + L + +P  +   VD S  ++E A  N     G +  F  + +   
Sbjct: 233 KVIDLGCGNGVLSVKLGQLNPNIQLTCVDESFMSIESASKNLTEALGNNREFRCVANNCL 292

Query: 156 DWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D FS+ +   D++V NPP+  +  I D +  ++      +  +GG       + +  G +
Sbjct: 293 DGFSAAQA--DLVVCNPPFHQQQAITDHIAWQMFCDAKHVLNNGG-------QLLVIG-N 342

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           RHL  DG  +   G   K +V  +  ++K  ++ A K
Sbjct: 343 RHLGYDGKLTRLFG---KTNVKTVAANKKFVILQATK 376


>gi|317147316|ref|XP_001822046.2| S-adenosylmethionine-dependent methyltransferase [Aspergillus
           oryzae RIB40]
          Length = 316

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 3/40 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           ILDLGTG G++ LALL++   F+G  VGVD S +++E+A+
Sbjct: 103 ILDLGTGNGSM-LALLRKRGGFRGVMVGVDYSARSVELAR 141


>gi|313904064|ref|ZP_07837444.1| methyltransferase [Eubacterium cellulosolvens 6]
 gi|313471213|gb|EFR66535.1| methyltransferase [Eubacterium cellulosolvens 6]
          Length = 189

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 12/82 (14%)

Query: 102 LDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           LDL  G+GA+ +  L    +S  F    VD S KA+E+ K N     ++++ +  Q D  
Sbjct: 46  LDLFAGSGAIGIEALSRGAQSCCF----VDQSRKAVEVIKENLAFCRLTDQAEVYQMDAV 101

Query: 159 SSVEGL-----FDVIVSNPPYI 175
           S+V+ L     FDV+  +PPY+
Sbjct: 102 SAVKSLANHEPFDVVFMDPPYL 123


>gi|294496389|ref|YP_003542882.1| methyltransferase [Methanohalophilus mahii DSM 5219]
 gi|292667388|gb|ADE37237.1| methyltransferase [Methanohalophilus mahii DSM 5219]
          Length = 201

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + D+G GTG + + A +  +P  + VG D   KA+ +A+ NAV  GV   F         
Sbjct: 50  VFDMGCGTGILAIGAAILGTP--EVVGYDSDPKAINVARENAVLMGVEVEFVNCP---IE 104

Query: 160 SVEGLFDVIVSNPPY 174
            V G  + +V NPP+
Sbjct: 105 KVSGKANTVVMNPPF 119


>gi|257125253|ref|YP_003163367.1| methyltransferase [Leptotrichia buccalis C-1013-b]
 gi|257049192|gb|ACV38376.1| methyltransferase [Leptotrichia buccalis C-1013-b]
          Length = 184

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R   S +  E RP  E + ++  +    ++      + LDL +GTG V    L      +
Sbjct: 11  RRIKSREGRETRPTLERIKEAIFSIIGEKVAD---AKFLDLYSGTGNVSFEALSRGAK-R 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIES 177
            + ++   +AL I   N    G+ E+    ++D   ++E L      FD+I  +PPY E+
Sbjct: 67  AIMIEEDKEALRIIIENVNHLGIEEKCRAYKNDVSRAIEILARKNEIFDIIFLDPPYKEN 126

Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +      +E    +  +  DG  I   S Y  +AD +   +  D     E  YN+KV
Sbjct: 127 ISTKT--IEKISEENLLERDGIIISEHSTYEKMADKIGNFVKYD-----ERDYNKKV 176


>gi|229579180|ref|YP_002837578.1| methylase [Sulfolobus islandicus Y.G.57.14]
 gi|228009894|gb|ACP45656.1| methylase [Sulfolobus islandicus Y.G.57.14]
          Length = 207

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G   
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   ++     F  +    +   L   K N + N        L  D  S +    FDV +
Sbjct: 54  IWSLIMGGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
            NPPY          L V +++  I  S  GG DG
Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|221236546|ref|YP_002518983.1| methyltransferase [Caulobacter crescentus NA1000]
 gi|220965719|gb|ACL97075.1| methyltransferase [Caulobacter crescentus NA1000]
          Length = 292

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R + R    +LD+G G+GA    A  +  P  + VG DIS   LE+A+  A   G+ E  
Sbjct: 56  RADLRAGEAVLDVGCGSGATTFEAAWRVGPQGRAVGADISGALLELARRRAGEQGL-EGV 114

Query: 151 DTLQSDWFSSVEGL-FDVIVS 170
           D +Q+D  +   G  FD IVS
Sbjct: 115 DFVQADAQTHDFGAGFDAIVS 135


>gi|149182753|ref|ZP_01861217.1| probable methyltransferase [Bacillus sp. SG-1]
 gi|148849519|gb|EDL63705.1| probable methyltransferase [Bacillus sp. SG-1]
          Length = 248

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 83  DSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           DS + F   + E   V    +LD+G GTG + L LLK+   +   G+D+S   L IA+  
Sbjct: 20  DSWVEFVQAQAEHYSVEGKGLLDIGCGTGELSLRLLKQG--YSVTGIDLSEDMLFIAREK 77

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL--FDVIV 169
           A + G+       Q D  S +EGL  FD+I 
Sbjct: 78  AESEGLD--LPLFQQD-MSELEGLGQFDIIT 105


>gi|117620314|ref|YP_857842.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|166223392|sp|A0KNJ1|PRMA_AERHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|117561721|gb|ABK38669.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 292

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGV+++ +  L +D   
Sbjct: 160 VVDFGCGSGILGIAALKLG-AARVIGIDIDPQAIQASRDNAERNGVADQIELYLPADQPQ 218

Query: 160 SVEGLFDVIVSN 171
            VE   DV+V+N
Sbjct: 219 DVEA--DVVVAN 228


>gi|312863190|ref|ZP_07723428.1| type I restriction-modification system, M subunit [Streptococcus
           vestibularis F0396]
 gi|311100726|gb|EFQ58931.1| type I restriction-modification system, M subunit [Streptococcus
           vestibularis F0396]
          Length = 534

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    + D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|170698892|ref|ZP_02889953.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
 gi|170136215|gb|EDT04482.1| Methyltransferase type 11 [Burkholderia ambifaria IOP40-10]
          Length = 282

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LD+G GTGAV LA+ +         GVDIS + +  A++ A  +G+   F    +   + 
Sbjct: 53  LDVGCGTGAVTLAIARRLGTHAHCTGVDISARMIAAAQARAERDGLGASFVDADAQTHAF 112

Query: 161 VEGLFDVIVS 170
               FD+IVS
Sbjct: 113 APDQFDLIVS 122


>gi|167567788|ref|ZP_02360704.1| NRPS/PKS hybrid [Burkholderia oklahomensis EO147]
          Length = 264

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 18/121 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++GW D Y+           PR E  +  D  LA    RI +R   R+L++G GTG + L
Sbjct: 28  LVGWADSYD-------GAPIPRDEMRMWRDEVLA----RIRERPSRRVLEIGCGTGMLLL 76

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVS 170
            L      F  VG+D S +A+   +      G+     TL       ++GL   FD I+ 
Sbjct: 77  PLAASCERF--VGLDFSAQAIARLRRVVARRGLDTV--TLVERAADELDGLARDFDTIIV 132

Query: 171 N 171
           N
Sbjct: 133 N 133


>gi|166363380|ref|YP_001655653.1| methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166085753|dbj|BAG00461.1| methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 219

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSD 156
            R+LD+GTGT  + + + +  P ++ + +D++   LEI + N +     E  + + +   
Sbjct: 43  ARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILNANCQEQIKLEKVDGK 102

Query: 157 WFSSVEGLFDVIVSN 171
                   FD+++SN
Sbjct: 103 NLPYQSEQFDLVISN 117


>gi|166030946|ref|ZP_02233775.1| hypothetical protein DORFOR_00627 [Dorea formicigenerans ATCC
           27755]
 gi|166029213|gb|EDR47970.1| hypothetical protein DORFOR_00627 [Dorea formicigenerans ATCC
           27755]
          Length = 242

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GT  G + + L++++   K + +DI+   LE A+ +    G+S+R +T  SD  ++
Sbjct: 20  VADIGTDHGYIPIHLIEQNLSPKVIAMDINKGPLERARIHIAGYGMSDRIETRLSDGLAA 79

Query: 161 VEGLFDVIVSNPPYIESVIVDCLG 184
           V          P  +E +IV  +G
Sbjct: 80  V---------KPKEVEEIIVAGMG 94


>gi|149920227|ref|ZP_01908699.1| O-methyltransferase, putative [Plesiocystis pacifica SIR-1]
 gi|149818993|gb|EDM78432.1| O-methyltransferase, putative [Plesiocystis pacifica SIR-1]
          Length = 356

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP++   +  R+LD+G  TG   LA     P  +   VD+  + LE+AK+N    GV+ R
Sbjct: 172 LPKVFASEPARVLDVGGNTGKFALACCGHDPKVEITIVDLP-RQLELAKANLREAGVASR 230

Query: 150 FDTLQSDWFS---SVEGLFDVI 168
            + + ++      ++ G  DVI
Sbjct: 231 VEFVAANMLDPEVALPGGHDVI 252


>gi|148240360|ref|YP_001225747.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803]
 gi|147848899|emb|CAK24450.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803]
          Length = 406

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKES 119
           YN R  L S            VD A+  + P R +     RILD G GTG     L   +
Sbjct: 35  YNWRWCLDS------------VDGAVRGATPVRADAGTPPRILDAGCGTGVSTDYLCHLN 82

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
           P  + + VDIS  AL +A+     +G +++  +L+ +  S +    EG FD I S
Sbjct: 83  PGAEILAVDISAGALGLARERLHRSGGAQQVRSLRQEQRSLLDLKDEGPFDYINS 137


>gi|302332146|gb|ADL22339.1| Type I restriction-modification system methyltransferase subunit,
           HsdM_1 [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 518

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 96  RDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           +D +R + D   G+G++ L + KE+  ++  G + +     +A+ N + + V  E FD  
Sbjct: 221 KDKLRHVYDPTCGSGSLLLRVGKETKVYRYFGQERNNTTYNLARMNMLLHDVRYENFDIR 280

Query: 154 QSDWFSSVEGL---FDVIVSNPPYIESVIVDC 182
             D   +   L   FD +++NPPY    I D 
Sbjct: 281 NDDTLENPAFLGNTFDAVIANPPYSAKWIADS 312


>gi|262383452|ref|ZP_06076588.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides
           sp. 2_1_33B]
 gi|262294350|gb|EEY82282.1| ubiquinone/menaquinone biosynthesis methyltransferase [Bacteroides
           sp. 2_1_33B]
          Length = 247

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 11/110 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122
           F+   ET   ++  L+F + +I +R  +          ILD+ TGTG + +++ K+    
Sbjct: 26  FDSIAETYDQLNHTLSFGIDKIWRRKGIAFLRPFSPKTILDIATGTGDLAISMYKKLRPD 85

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170
             VG DIS   +E+ +      G SE     Q D    +  E  FD + +
Sbjct: 86  HIVGADISLGMMEVGRKKVAAAGYSEYISFEQQDCTALTYEENSFDAVTA 135


>gi|152990737|ref|YP_001356459.1| hypothetical protein NIS_0992 [Nitratiruptor sp. SB155-2]
 gi|151422598|dbj|BAF70102.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 233

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + L + ++ P      ++I  + +++A  NA  N   +  +    ++   
Sbjct: 32  VLDVGTGSGILALLIKRDYPKASVNAIEIQERFVKMANINADAN--KKDINIYFGNFLHM 89

Query: 161 V-EGLFDVIVSNPPYIESVIV 180
           V E  FD IVSNPP+  + ++
Sbjct: 90  VFEKRFDWIVSNPPFYHTEVL 110


>gi|124004506|ref|ZP_01689351.1| menaquinone biosynthesis methyltransferase UbiE [Microscilla marina
           ATCC 23134]
 gi|123990078|gb|EAY29592.1| menaquinone biosynthesis methyltransferase UbiE [Microscilla marina
           ATCC 23134]
          Length = 243

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            ILD+ TGTG   +A LK  P  K  GVDIS   LE+ K      G+
Sbjct: 61  HILDVATGTGDFAIAALKAKP-TKVTGVDISAGMLEVGKQKIKKKGL 106


>gi|322494680|emb|CBZ29983.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 253

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G+G G VCL +L E+   K VGV+I    +  A+        S+R   L SD FS  E
Sbjct: 110 DIGSGVGNVCLQVLSETKCPKSVGVEIIPSRIRAAEE------ASKRAKLLYSDVFSKKE 163

Query: 163 GLF 165
            ++
Sbjct: 164 AVW 166


>gi|307637134|gb|ADN79584.1| typeI restriction enzyme-M protein [Helicobacter pylori 908]
 gi|325995725|gb|ADZ51130.1| type I restriction enzyme M protein [Helicobacter pylori 2018]
 gi|325997321|gb|ADZ49529.1| type I restriction enzyme M protein [Helicobacter pylori 2017]
          Length = 381

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 22/112 (19%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD--------I 129
           T L + S +A  L  I+    V+I D   GTG + +AL  +      +G D        I
Sbjct: 211 TPLSIASIIA-KLLVIKPTQSVKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDI 263

Query: 130 SCKALEIAKSNAVTNGVSERF------DTLQSDWFSS-VEGLFDVIVSNPPY 174
           S K+L + K N + N ++         +TL + + S   +G  D IVSNPP+
Sbjct: 264 SQKSLRMLKLNLILNDLTHSLRYAIEGNTLTNPYHSKDHKGKMDFIVSNPPF 315


>gi|300727710|ref|ZP_07061096.1| methyltransferase small domain protein [Prevotella bryantii B14]
 gi|299774998|gb|EFI71604.1| methyltransferase small domain protein [Prevotella bryantii B14]
          Length = 241

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 11/85 (12%)

Query: 100 RILDLGTGTGAVCLALLKESP--FFKGVGV-DISCK-ALEIAKSNAVTNGVSERFDTLQS 155
            +LD+GTGTG + L + +  P  F   + + D +C+ A+E  +++   + +   F  LQ 
Sbjct: 38  HVLDIGTGTGLLALMMAQRYPNAFVDAIDIDDAACRQAVENVRNSIFHDQICVHFMDLQK 97

Query: 156 DWFSSVEG------LFDVIVSNPPY 174
            ++  ++G       +D I+SNPPY
Sbjct: 98  -YYLFLQGNSGDVKKYDSIISNPPY 121


>gi|269218062|ref|ZP_06161916.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212997|gb|EEZ79337.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 538

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
            R++D G G+G   LA  K  P  +  GVD+   A  + ++N    G+++R +   SD+ 
Sbjct: 104 TRVIDPGAGSGRYLLAAAKSFPEARLFGVDVDPLAALMLRANLAACGLADRAEVRVSDFR 163

Query: 158 ---FSSVEGLFDVIVSNPPYI 175
                  +G   + + NPPY+
Sbjct: 164 TLSLPPADG-STLFLGNPPYV 183


>gi|242399746|ref|YP_002995171.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM
           739]
 gi|242266140|gb|ACS90822.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM
           739]
          Length = 393

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LD+ T TG   + A +  +   K + VD S  A+E AK NA  N V  + D L    F
Sbjct: 217 KVLDVFTYTGGFAIHAAVAGAE--KVIAVDKSPAAIEQAKENAKLNDVDGKMDFLVGSAF 274

Query: 159 SSVEGL------FDVIVSNPP 173
           S +E +      FD+++ +PP
Sbjct: 275 SIMEKMQKKGEKFDIVILDPP 295


>gi|239998173|ref|ZP_04718097.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|240127432|ref|ZP_04740093.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268594025|ref|ZP_06128192.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|268547414|gb|EEZ42832.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
          Length = 295

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|227824077|ref|YP_002828050.1| methyltransferase small [Sinorhizobium fredii NGR234]
 gi|227343079|gb|ACP27297.1| methyltransferase small [Sinorhizobium fredii NGR234]
          Length = 338

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 70  DTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           D FE  P   +   VD+       R+ K       D G G G + + L + SP  KG+ +
Sbjct: 165 DVFEAAPGMFSHDRVDAGSELLASRLPKDFTGHAADFGAGWGYLSVMLAQASPGLKGIDL 224

Query: 128 -DISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
            +   +ALE A+ N   N  +        D  S      +D+IV NPP+ E 
Sbjct: 225 FEADHEALEAARRNVKANAPTTPARFYWHDLTSEETRDKYDLIVMNPPFHEG 276


>gi|256851318|ref|ZP_05556707.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 27-2-CHN]
 gi|260660742|ref|ZP_05861657.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 115-3-CHN]
 gi|282933237|ref|ZP_06338624.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 208-1]
 gi|297206188|ref|ZP_06923583.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii JV-V16]
 gi|256616380|gb|EEU21568.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 27-2-CHN]
 gi|260548464|gb|EEX24439.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 115-3-CHN]
 gi|281302741|gb|EFA94956.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 208-1]
 gi|297149314|gb|EFH29612.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii JV-V16]
          Length = 437

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD     G     L +  P  K + +DI  K L + K  A    V ER +TL  D   +
Sbjct: 252 VLDTCAAPGGKTSQLAENLPQGKVISLDIHKKKLNLIKKYAERMHVDERVETLALDARKA 311

Query: 161 VEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV--- 213
            E      FD I+ + P        C GL +    P I  D  +  + +   I  G+   
Sbjct: 312 AEHFSDTKFDKILVDAP--------CSGLGLLRRKPEIRYDKTMKDVHNLARIQLGILNS 363

Query: 214 -SRHLNKDG-----LCSVEIGYNQKV 233
            ++ L K+G      CS+ I  N++V
Sbjct: 364 AAQLLKKNGELVYSTCSITIEENEQV 389


>gi|119509928|ref|ZP_01629070.1| hypothetical protein N9414_05594 [Nodularia spumigena CCY9414]
 gi|119465394|gb|EAW46289.1| hypothetical protein N9414_05594 [Nodularia spumigena CCY9414]
          Length = 238

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--- 156
           RIL+LG GTG + L + +  P  + + +D S + L+ A     + G  +++  +Q+D   
Sbjct: 44  RILELGCGTGELTLKIFQRFPDVEIIALDYSPRMLQCAGKKIKSAGYQQKWTGIQADFGE 103

Query: 157 WFSSVEGL-----FDVIVSN 171
           W  + E       FD  VS+
Sbjct: 104 WADNPEKFDIGSEFDACVSS 123


>gi|312867278|ref|ZP_07727488.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
 gi|311097407|gb|EFQ55641.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
          Length = 248

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS L    P++ KR +  I+DL  G GAV L     +   + +GV+I  +  ++A  + 
Sbjct: 33  VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQIIGVEIQERLADMATRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             N ++++   +  D     + +     D+I+ NPPY +
Sbjct: 90  ALNDLNQQMSMITDDLKHLPQHIGGSKVDIILCNPPYFK 128


>gi|229553103|ref|ZP_04441828.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus rhamnosus LMS2-1]
 gi|258540282|ref|YP_003174781.1| type I restriction-modification system, M subunit [Lactobacillus
           rhamnosus Lc 705]
 gi|229313600|gb|EEN79573.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus rhamnosus LMS2-1]
 gi|257151958|emb|CAR90930.1| Type I restriction-modification system, M subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 549

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 23/148 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPF-FKGV---GVDISCKALEIAKSNAV------TNG 145
           +++  + D   G+G++ L +  E P   K V   G +++     +A+ N +      TN 
Sbjct: 228 QEIFTVYDPTMGSGSLLLTVRDELPATVKAVMFHGQELNTTTFNLARMNLMMHNVPYTNM 287

Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                DTL+ DW   V G       FD +V+NPPY  S+  D    +++  DPR    G 
Sbjct: 288 SLRNADTLEDDWPDGVVGGVDSPRSFDAVVANPPY--SIHWDNSENKLK--DPRFKPFGA 343

Query: 200 IDGLSH--YRTIADGVSRHLNKDGLCSV 225
           +   S   +  +  G+  HLN  G  ++
Sbjct: 344 LAPKSKADFAFVEHGL-YHLNDTGTMAI 370


>gi|158289899|ref|XP_001689406.1| AGAP010425-PA [Anopheles gambiae str. PEST]
 gi|157018380|gb|EDO64279.1| AGAP010425-PA [Anopheles gambiae str. PEST]
          Length = 468

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 27/145 (18%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY------- 174
           K + +DI  + +E+AK NA   GV++R + +  D+   V+ L  DV+  +PP+       
Sbjct: 333 KVIAIDIDPRKIEMAKHNAAVYGVADRIEFIVGDFMQLVDRLQADVVFLSPPWGGPGYLK 392

Query: 175 -----IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
                +E  ++     ++ +   R+S           + IA  + R+ N   L  +  G 
Sbjct: 393 DEVYNLEQSLLPVPATQLMEAAQRVS-----------KNIALYLPRNSNTQQLTML-AGP 440

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYG 254
           N  V++ + F  RKL  + A+  YG
Sbjct: 441 NGAVEIEQNFLDRKLIALTAY--YG 463


>gi|145238274|ref|XP_001391784.1| S-adenosylmethionine-dependent methyltransferase [Aspergillus niger
           CBS 513.88]
 gi|134076267|emb|CAK39552.1| unnamed protein product [Aspergillus niger]
          Length = 348

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 3/44 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAK 138
           D   ILDLGTG G++ LALL++   +KG  VG+D S +++E+A+
Sbjct: 125 DQPSILDLGTGNGSM-LALLRKRGGYKGAMVGIDYSIRSVELAR 167


>gi|126661911|ref|ZP_01732910.1| putative RNA methyltransferase [Flavobacteria bacterium BAL38]
 gi|126625290|gb|EAZ95979.1| putative RNA methyltransferase [Flavobacteria bacterium BAL38]
          Length = 470

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQ 154
           + DL TGTG +   + K++   K +GV+   +A+  AK+NA  N ++           + 
Sbjct: 327 VYDLYTGTGTIAQFVSKQAK--KVIGVEAVPEAIIDAKANATRNNITNCEFYVGDMKNVF 384

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F +  G  DVI+++PP
Sbjct: 385 NDEFINQHGQPDVIITDPP 403


>gi|150397317|ref|YP_001327784.1| type 11 methyltransferase [Sinorhizobium medicae WSM419]
 gi|150028832|gb|ABR60949.1| Methyltransferase type 11 [Sinorhizobium medicae WSM419]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LDLGTGTG +    L E  + +G+GVD S   L +A+SN    G+++
Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205


>gi|125984764|ref|XP_001356146.1| GA21936 [Drosophila pseudoobscura pseudoobscura]
 gi|195161922|ref|XP_002021805.1| GL26704 [Drosophila persimilis]
 gi|54644465|gb|EAL33206.1| GA21936 [Drosophila pseudoobscura pseudoobscura]
 gi|194103605|gb|EDW25648.1| GL26704 [Drosophila persimilis]
          Length = 216

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   R+LDLG G G   +AL  E  + +  GVD S KA+E+A+S A
Sbjct: 58  KQTARVLDLGCGNGMFLVALANEG-YAQLTGVDYSPKAIELARSIA 102


>gi|302023422|ref|ZP_07248633.1| RNA methylase family protein [Streptococcus suis 05HAS68]
          Length = 327

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            G DI  + +EIAK NA   GV +       R   L+SD    + G   VI+SNPPY E 
Sbjct: 199 AGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRSD---KING---VIISNPPYGER 252

Query: 178 VIVD 181
           ++ D
Sbjct: 253 LLDD 256


>gi|294782904|ref|ZP_06748230.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA]
 gi|294481545|gb|EFG29320.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA]
          Length = 243

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151
           ++  +ILD+GTG   + L L K +   K  GV+I   + ++A  N   N ++E+    +D
Sbjct: 42  KNTKKILDIGTGNAVIPLFLSKRTSA-KIYGVEIQEISYQLALRNININNLNEQIYIIYD 100

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
            +++       G FD+++SNPP+
Sbjct: 101 NIKNYLKYFTIGSFDIVLSNPPF 123


>gi|254492950|ref|ZP_05106121.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           1291]
 gi|226511990|gb|EEH61335.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           1291]
          Length = 295

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|221308128|ref|ZP_03589975.1| hypothetical protein Bsubs1_01768 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312452|ref|ZP_03594257.1| hypothetical protein BsubsN3_01781 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317386|ref|ZP_03598680.1| hypothetical protein BsubsJ_01763 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321649|ref|ZP_03602943.1| hypothetical protein BsubsS_01794 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767092|ref|NP_388198.2| methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|229485214|sp|O31474|YCGJ_BACSU RecName: Full=Uncharacterized methyltransferase ycgJ
 gi|225184719|emb|CAB12110.2| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 253

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTN 144
           L   +   E R   R+LD+G G G   LA    SP+ +  +GVD + + +E+A S A   
Sbjct: 26  LGLMIKTAECRAEHRVLDIGAGAGHTALAF---SPYVQECIGVDATKEMVEVASSFAQEK 82

Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169
           GV   RF    ++     +  FD+I 
Sbjct: 83  GVENVRFQQGTAESLPFPDDSFDIIT 108


>gi|195023706|ref|XP_001985735.1| GH20919 [Drosophila grimshawi]
 gi|193901735|gb|EDW00602.1| GH20919 [Drosophila grimshawi]
          Length = 218

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   R+LDLG G G   +AL  E  F +  GVD S KA+E+A+  A
Sbjct: 57  KQSARVLDLGCGNGMFLIALANEG-FIQLTGVDYSPKAIELARGIA 101


>gi|167752427|ref|ZP_02424554.1| hypothetical protein ALIPUT_00671 [Alistipes putredinis DSM 17216]
 gi|167660668|gb|EDS04798.1| hypothetical protein ALIPUT_00671 [Alistipes putredinis DSM 17216]
          Length = 238

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           RILD+ TGTG + LA+ +     + +GVD+S   L  A+  A   G+ ER
Sbjct: 55  RILDVATGTGDLALAMARRMRGVQVLGVDLSENMLAEARRKATACGLDER 104


>gi|325579239|ref|ZP_08149195.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159474|gb|EGC71608.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 295

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       +G+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASRNNAEQNGVADRLQLFLSD-DKP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 ADLKADVVVAN 230


>gi|312135346|ref|YP_004002684.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           owensensis OL]
 gi|311775397|gb|ADQ04884.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           owensensis OL]
          Length = 306

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 5/90 (5%)

Query: 84  SALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            + A  L  I+K  +  + +LD+GTG+G + +A  K+    + + VDI   A+++A  NA
Sbjct: 153 ESTALCLEAIQKYVKPGMDVLDVGTGSGILAIA-AKKLLASRVLAVDIDEVAVKVAMENA 211

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             NGV    +  +++    +E  FD++V+N
Sbjct: 212 KLNGV--EIEIKKNNLVEGIEEKFDIVVAN 239


>gi|295099358|emb|CBK88447.1| 16S RNA G1207 methylase RsmC [Eubacterium cylindroides T2-87]
          Length = 196

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 9/75 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDLG G G + + L   S F+K     +DI+ +A E+AK N   + +     TL++D  
Sbjct: 62  VLDLGCGIGVIGIVL---SSFWKTNMTMIDINARACELAKKNLERHSIQA---TLKND-D 114

Query: 159 SSVEGLFDVIVSNPP 173
              EG F+ I+ NPP
Sbjct: 115 GIKEGNFECILLNPP 129


>gi|261837872|gb|ACX97638.1| type I restriction enzyme M protein [Helicobacter pylori 51]
          Length = 543

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           E    V+I D   GTG + +AL  +  +        DIS K+L++ K N + N ++    
Sbjct: 226 EPTQNVKIYDPSAGTGTLLMALAHQIGTDSCTLYAQDISQKSLKMLKLNLILNDLTHSLK 285

Query: 151 -----DTLQSDWFS-SVEGLFDVIVSNPPY 174
                +TL + + S   +G  D IVSNPP+
Sbjct: 286 YAIEGNTLTNPYHSKECKGEMDYIVSNPPF 315


>gi|164424513|ref|XP_960268.2| hypothetical protein NCU07107 [Neurospora crassa OR74A]
 gi|157070546|gb|EAA31032.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 326

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTGTG   + +  E P    +G DIS      A  N     VS + D  Q DW + 
Sbjct: 88  ILDIGTGTGNWAIDIATEFPSASVIGTDISAVQPTFAPPN-----VSFQIDDAQLDW-TF 141

Query: 161 VEGLFDVI 168
             G FD+I
Sbjct: 142 EPGHFDLI 149


>gi|153812010|ref|ZP_01964678.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174]
 gi|149831909|gb|EDM86995.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174]
          Length = 250

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   ++LD+GTGTG +   L  +       G++I  +  ++A+ +   N +    D +  
Sbjct: 48  RQNEKVLDMGTGTGIIPFLLKAKDKGSHLTGLEIQEECADMARRSVSYNHLEADIDIVCG 107

Query: 156 DWFSSVE----GLFDVIVSNPPYI 175
           D   + E      F  + SNPPY+
Sbjct: 108 DIKEAAEIFGAASFHAVTSNPPYM 131


>gi|152998058|ref|YP_001342893.1| putative SAM-dependent methyltransferase [Marinomonas sp. MWYL1]
 gi|205829563|sp|A6W2M9|RLMF_MARMS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|150838982|gb|ABR72958.1| protein of unknown function DUF890 [Marinomonas sp. MWYL1]
          Length = 327

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE----I 136
           L D   A +L  I +   V++LD+G G   V   +  +   ++ VG D++  A+     I
Sbjct: 100 LADLLAASNLGVIPRGKGVKVLDVGVGANCVYPIIGHQEYGWQFVGSDVNPVAVATCDTI 159

Query: 137 AKSNAVTNG-VSERFDTLQSDWFSSV---EGLFDVIVSNPPY--IESVIVD 181
            KSN    G +S R  T  +  F  V   +  FD+ + NPP+   ES ++D
Sbjct: 160 VKSNPCLKGAISARLQTQSAKLFDGVWKEKDRFDLTLCNPPFHTSESAMID 210


>gi|91774521|ref|YP_544277.1| putative SAM-dependent methyltransferase [Methylobacillus
           flagellatus KT]
 gi|123380658|sp|Q1H501|RLMF_METFK RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|91708508|gb|ABE48436.1| 23S rRNA m(6)A-1618 methyltransferase [Methylobacillus flagellatus
           KT]
          Length = 336

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFDTL 153
           VR+LD+GTG   V   + ++   +  VG DI+ +ALE     +A +  +   +  R    
Sbjct: 113 VRVLDIGTGANLVYPIIGQKEYGWHFVGTDINVEALENAQGIVAANPGLAGAIELRLQRN 172

Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLE 186
               FS V      FD+ + NPP+  S      G E
Sbjct: 173 VGAVFSGVVQESERFDLTMCNPPFHASQAAAMAGTE 208


>gi|15790327|ref|NP_280151.1| hypothetical protein VNG1280C [Halobacterium sp. NRC-1]
 gi|169236060|ref|YP_001689260.1| hypothetical protein OE2833R [Halobacterium salinarum R1]
 gi|10580801|gb|AAG19631.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727126|emb|CAP13912.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 200

 Score = 37.4 bits (85), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           +LDLG GTGA+ L L  ++   + VG DIS   L  A+  A T GV    FDT +     
Sbjct: 46  VLDLGCGTGAIALGLAADA--GRVVGRDISDGMLTQAREKATTRGVDNVAFDTGRFRE-P 102

Query: 160 SVEGLFDVIVSN 171
           + +G  DV+VSN
Sbjct: 103 NYDGDADVVVSN 114


>gi|332883049|gb|EGK03333.1| hypothetical protein HMPREF9456_01970 [Dysgonomonas mossii DSM
           22836]
          Length = 236

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L + + +       +DI   A+  AK N   +    R ++  +   ++
Sbjct: 40  ILDVGTGTGLISLMMAQRNEKTIIDAIDIDSDAVSQAKDNIENSPFGNRINSWNASLQEF 99

Query: 158 FSSVEGLFDVIVSNPPY 174
            S  E  ++VIVSNPP+
Sbjct: 100 SSKAEKRYNVIVSNPPF 116


>gi|318061095|ref|ZP_07979816.1| Methyltransferase type 12 [Streptomyces sp. SA3_actG]
          Length = 322

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            I+DLG+GTGA   ALL   P      VD S   L+  +  A   G+  R  T+ +D
Sbjct: 95  HIVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 151


>gi|225848651|ref|YP_002728814.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644243|gb|ACN99293.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 254

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156
           +++DLGTG+G + + L  +    +  G+++     ++A+ N   N V       D  +  
Sbjct: 53  KLIDLGTGSGIILILLSLKYKNIQFYGLEVQQDLYQLAQKNIKLNNVKADLKLGDVKEVK 112

Query: 157 WFSSVEGLFDVIVSNPPYIES 177
            F   +  FD +V NPPY +S
Sbjct: 113 KFYEHQ-YFDYVVINPPYFKS 132


>gi|156838443|ref|XP_001642927.1| hypothetical protein Kpol_411p14 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113507|gb|EDO15069.1| hypothetical protein Kpol_411p14 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 228

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 38/182 (20%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE-----------TELLVDSALAFSLPRIEKRDVVRILDLG 105
           W DFY    +L  + F+  PE            E+ +   L  ++     +    I+DLG
Sbjct: 18  WDDFY----SLERENFKENPEDVGECWFNDSDAEMRMVDFLNDNIGSYNIKSDSSIIDLG 73

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCK----ALEIAKSNAVTNGVS-ERFDTLQSDWFSS 160
           TG G +   L +       +GVD S +    A EIAK+    + +  E+ D  Q++W   
Sbjct: 74  TGNGHLLFELFENDFDGSMLGVDYSEQSVNFATEIAKNKGYNDSIKFEQADIFQNNW--- 130

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G FD++      ++   +D + L    FD         DG +     +  + + L+KD
Sbjct: 131 NPGKFDIV------LDKGTLDAIALSGIKFD---------DGKTIVDIYSKVIEKLLDKD 175

Query: 221 GL 222
           G+
Sbjct: 176 GV 177


>gi|138893974|ref|YP_001124427.1| RNA methyltransferase-like protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250476|ref|ZP_03149167.1| RNA methyltransferase, TrmA family [Geobacillus sp. G11MC16]
 gi|134265487|gb|ABO65682.1| RNA methyltransferase-like protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196209966|gb|EDY04734.1| RNA methyltransferase, TrmA family [Geobacillus sp. G11MC16]
          Length = 460

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 17/121 (14%)

Query: 62  NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F +  PE T++L D AL ++    E      ++D   G G + L L K++
Sbjct: 277 DIQFAISARSFYQVNPEQTKVLYDKALEYA----ELTGTETVIDAYCGIGTISLFLAKKA 332

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNP 172
                 GV+I  +A+E AK NA  NG++         + +   W+   EG+  D +V +P
Sbjct: 333 KHV--YGVEIVPEAIEDAKRNAALNGITNVTFAVGAAEDVIPRWYE--EGIRADCLVVDP 388

Query: 173 P 173
           P
Sbjct: 389 P 389


>gi|330900061|gb|EGH31480.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 237

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+G + ++L +  P    V  DIS  ++  +  N     +  R   ++SD FS+
Sbjct: 83  VLDLGCGSGYIGISLYR--PGMDLVLADISKDSILSSTENLRRMEIPGR--VIESDLFSN 138

Query: 161 VEGL-FDVIVSNPPYIESVI 179
           ++GL FD I+ NPP ++  I
Sbjct: 139 LKGLRFDTILFNPPLLDKKI 158


>gi|331003128|ref|ZP_08326638.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412959|gb|EGG92336.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 248

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+DL TG+G V + L  ++   +  G++I     ++A  + + N + E+ D +  D  ++
Sbjct: 52  IIDLCTGSGIVPVLLSAKTSAKRITGIEIQKDIADMANRSVLYNSLEEKIDIINDDIANA 111

Query: 161 VEGL----FDVIVSNPPYIE 176
           ++ +     D I  NPPY++
Sbjct: 112 LKYIKPCSVDTISVNPPYMK 131


>gi|313124290|ref|YP_004034549.1| 16S RNA methylase rsmc [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280853|gb|ADQ61572.1| 16S RNA methylase RsmC [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 200

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90
           +++F  N  V   +H   + + G     N+ LT  +  F        + +L++  L   L
Sbjct: 3   EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKNRVDYGSGVLIEQMLDQEL 58

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P         ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  N  +   
Sbjct: 59  PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111

Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173
           +   SD +  V G + +IV+NPP
Sbjct: 112 NIFASDRYQEVSGQYAMIVTNPP 134


>gi|228478347|ref|ZP_04062955.1| type I restriction-modification system, M subunit [Streptococcus
           salivarius SK126]
 gi|228250026|gb|EEK09296.1| type I restriction-modification system, M subunit [Streptococcus
           salivarius SK126]
          Length = 534

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    + D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|91789281|ref|YP_550233.1| methyltransferase small [Polaromonas sp. JS666]
 gi|91698506|gb|ABE45335.1| methyltransferase small [Polaromonas sp. JS666]
          Length = 417

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+GTGTG +   L   S   + V  D   +AL  A+ N    G  +  +  +++ F   
Sbjct: 243 FDIGTGTGVLAAVLALRSGVQRVVATDQDPRALACARDNLKRLGFPQ-VEVREANLFP-- 299

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           EG   +IV NPP++ +     +   V D D R+ L G + GL+ +
Sbjct: 300 EGRAHIIVCNPPWLPARPGSPVEHAVYDEDSRMLL-GFLGGLAAH 343


>gi|75910532|ref|YP_324828.1| trans-aconitate 2-methyltransferase [Anabaena variabilis ATCC
           29413]
 gi|75704257|gb|ABA23933.1| trans-aconitate 2-methyltransferase [Anabaena variabilis ATCC
           29413]
          Length = 254

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ ++ +RILDLG GTG +   L       + +G+D S K L +A   A   G   RF+ 
Sbjct: 28  VQPQENLRILDLGCGTGKLTQYLHDTLAAKETLGIDASEKMLSVASQFA---GNRLRFEQ 84

Query: 153 LQSDWFSSVEGLFDVIVSN 171
            + +  S  EG FDV+ SN
Sbjct: 85  GRIE-DSPGEGKFDVVFSN 102


>gi|157151457|ref|YP_001449876.1| type I restriction-modification system, M subunit [Streptococcus
           gordonii str. Challis substr. CH1]
 gi|157076251|gb|ABV10934.1| type I restriction-modification system, M subunit [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 535

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R E      + D   G+G++ L   K S   + V   G +
Sbjct: 201 YTPQPVAKLM--TQIAF-LGR-EDEQGFTLYDATMGSGSLLLNAKKYSHQPQTVQYFGQE 256

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 257 LNTSTYNLARMNMILHGVPVENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 308


>gi|86358431|ref|YP_470323.1| ribosomal protein L11 methyltransferase [Rhizobium etli CFN 42]
 gi|123511392|sp|Q2K6E0|PRMA_RHIEC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|86282533|gb|ABC91596.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli CFN
           42]
          Length = 292

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++    T  +  F 
Sbjct: 156 LDLGTGSGVLAIAVRKLKNMPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212

Query: 160 SV----EGLFDVIVSN 171
           S      G FD+I++N
Sbjct: 213 STAFSEHGPFDLIIAN 228


>gi|307308264|ref|ZP_07587973.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti
           BL225C]
 gi|307319731|ref|ZP_07599156.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti
           AK83]
 gi|306894662|gb|EFN25423.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti
           AK83]
 gi|306901262|gb|EFN31868.1| transcriptional regulator, ArsR family [Sinorhizobium meliloti
           BL225C]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LDLGTGTG +    L E  + +G+GVD S   L +A+SN    G+++
Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205


>gi|265753522|ref|ZP_06088877.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           3_1_33FAA]
 gi|263235236|gb|EEZ20760.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           3_1_33FAA]
          Length = 473

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + F S  G  DVI+++PP
Sbjct: 387 TQE-FISQHGRPDVIITDPP 405


>gi|257068719|ref|YP_003154974.1| putative N6-adenine-specific DNA methylase [Brachybacterium faecium
           DSM 4810]
 gi|256559537|gb|ACU85384.1| predicted N6-adenine-specific DNA methylase [Brachybacterium
           faecium DSM 4810]
          Length = 339

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G+G   +  L  +   + VGVD+   A++ A+++        R D L  D  ++
Sbjct: 190 LLDLTCGSGTFLVEQLHAAVPARAVGVDLDPAAIDAARAHQRAARRKGRIDWLTGDVLTA 249

Query: 161 -VEGLFDVIVSNPPY 174
            +EG F  +V+NPP+
Sbjct: 250 DLEGGFTKMVTNPPW 264


>gi|312132380|ref|YP_003999719.1| protein [Bifidobacterium longum subsp. longum BBMN68]
 gi|291516180|emb|CBK69796.1| Methyltransferase domain [Bifidobacterium longum subsp. longum F8]
 gi|311772531|gb|ADQ02019.1| Hypothetical protein BBMN68_105 [Bifidobacterium longum subsp.
           longum BBMN68]
          Length = 135

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142
           LA  LP  +   V R+LD+G G G     L +  P  K +GVD S   +E A+       
Sbjct: 23  LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 81

Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                VS R D L +D        FDV+ SN
Sbjct: 82  FQLCDVSARLDELPAD--------FDVVFSN 104


>gi|16127725|ref|NP_422289.1| UbiE/COQ5 family methlytransferase [Caulobacter crescentus CB15]
 gi|13425221|gb|AAK25457.1| methlytransferase, UbiE/COQ5 family [Caulobacter crescentus CB15]
          Length = 276

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R + R    +LD+G G+GA    A  +  P  + VG DIS   LE+A+  A   G+ E  
Sbjct: 40  RADLRAGEAVLDVGCGSGATTFEAAWRVGPQGRAVGADISGALLELARRRAGEQGL-EGV 98

Query: 151 DTLQSDWFSSVEGL-FDVIVS 170
           D +Q+D  +   G  FD IVS
Sbjct: 99  DFVQADAQTHDFGAGFDAIVS 119


>gi|319654336|ref|ZP_08008424.1| YefA protein [Bacillus sp. 2_A_57_CT2]
 gi|317394036|gb|EFV74786.1| YefA protein [Bacillus sp. 2_A_57_CT2]
          Length = 460

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 63/120 (52%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF-EPRPE-TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F +  PE T++L D AL ++    E++    ++D   G G + L L +++
Sbjct: 277 DIKFAISARSFYQVNPEQTKVLYDKALEYANLSGEEQ----VIDAYCGIGTISLFLAQKA 332

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173
                 GV+I  +A+E AK NA  NG++       + + +  DW+       +V+V +PP
Sbjct: 333 KEV--FGVEIVPEAIEDAKRNADLNGMTNASFAVGKAEEVIPDWYKK-GNTAEVLVVDPP 389


>gi|313888247|ref|ZP_07821918.1| methyltransferase small domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845650|gb|EFR33040.1| methyltransferase small domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 131

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 6/79 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G + L +     + +   VDI+   LE  + + + N + ++   ++ D F+
Sbjct: 38  RALDLGCGNGILSLRIADR--YEEIHSVDINKIVLENFRESLIVNRLEDKIKIIEKDVFA 95

Query: 160 SVE----GLFDVIVSNPPY 174
             E      FD IV NPPY
Sbjct: 96  LKEVYETNYFDSIVFNPPY 114


>gi|269103445|ref|ZP_06156142.1| predicted O-methyltransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163343|gb|EEZ41839.1| predicted O-methyltransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 237

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---W 157
           ILD+GTG+G + L   + +       +++   A  +AK N   +  S R   ++++   W
Sbjct: 40  ILDIGTGSGLLALMAAQRTGDASITAIELDPTAALVAKDNFGHSPWSARLSCIEANLIHW 99

Query: 158 FSSV-EGLFDVIVSNPPY 174
           F ++ +  F  IV NPPY
Sbjct: 100 FPTISKQTFGSIVCNPPY 117


>gi|212693125|ref|ZP_03301253.1| hypothetical protein BACDOR_02632 [Bacteroides dorei DSM 17855]
 gi|212664230|gb|EEB24802.1| hypothetical protein BACDOR_02632 [Bacteroides dorei DSM 17855]
          Length = 473

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + F S  G  DVI+++PP
Sbjct: 387 TQE-FISQHGRPDVIITDPP 405


>gi|59800510|ref|YP_207222.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA
           1090]
 gi|81311265|sp|Q5FAH7|PRMA_NEIG1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|59717405|gb|AAW88810.1| putative ribosomal protein L11 methyltransferase [Neisseria
           gonorrhoeae FA 1090]
          Length = 295

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D+L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDSLP--- 222

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 223 ----QGQFDVVVAN 232


>gi|330447453|ref|ZP_08311102.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491644|dbj|GAA05599.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWF 158
           ++LD G G G +   +  + P       DIS  A+E AK    V N  + +F    +D +
Sbjct: 202 KVLDFGCGAGVIGAVMKAKYPAIDLELCDISALAIESAKETFKVNNLEASKFTA--TDVY 259

Query: 159 SSVEGLFDVIVSNPPY 174
            ++ G +  ++SNPP+
Sbjct: 260 KTLTGPYQFLISNPPF 275


>gi|148244517|ref|YP_001219211.1| hypothetical protein COSY_0362 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326344|dbj|BAF61487.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 195

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 16/118 (13%)

Query: 63  VRLTLSS--DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           V LTL +    F PR      +D      +  ++  +  + LDLG G G + LA+ K  P
Sbjct: 23  VNLTLKTRWGVFSPRS-----IDDGTKLFMKYLKIINDDKCLDLGCGYGPIGLAVAKSCP 77

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEG--LFDVIVSNPP 173
             +   VD    A+E++  NA  N    R D +Q   SD F SV     FD ++SN P
Sbjct: 78  KTEVHMVDKDFIAVELSNINAKLN----RIDNIQVYLSDAFLSVNKTDYFDQVLSNVP 131


>gi|108798553|ref|YP_638750.1| methyltransferase type 11 [Mycobacterium sp. MCS]
 gi|108768972|gb|ABG07694.1| Methyltransferase type 11 [Mycobacterium sp. MCS]
          Length = 197

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E+R  +    L  G GA    +L     +  +GVD S +A+E+A++NA   GV+ RF+ 
Sbjct: 21  LERRGAISGAVLDAGCGAGEHTILLTGLGYDVLGVDFSARAVELARANAAARGVNARFEV 80

Query: 153 LQS 155
             +
Sbjct: 81  ADA 83


>gi|57641442|ref|YP_183920.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           kodakarensis KOD1]
 gi|57159766|dbj|BAD85696.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           kodakarensis KOD1]
          Length = 195

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 18/100 (18%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TELL++S +         +   R+LDLG G G + +   +   +   V  D++ +A+ IA
Sbjct: 45  TELLIESMVL--------QPGWRVLDLGCGYGPIGIVASRFVDYV--VMTDVNRRAVSIA 94

Query: 138 KSNAVTNGVSE---RFDTLQSDWFSSVEG-LFDVIVSNPP 173
           K N   NGV     R+ +L    +  V G  FD I++NPP
Sbjct: 95  KKNLKINGVRNAEVRWGSL----YEPVAGEKFDSIITNPP 130


>gi|118580724|ref|YP_901974.1| RNA methyltransferase [Pelobacter propionicus DSM 2379]
 gi|118503434|gb|ABK99916.1| 23S rRNA m(5)U-1939 methyltransferase [Pelobacter propionicus DSM
           2379]
          Length = 493

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 17/83 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----------ERF 150
           +LDL  G G + L L + +   + +GV++   A+E A+ NA  NG+S          E+ 
Sbjct: 342 VLDLYCGIGGIALTLARRA--RRVIGVEVVEAAVEDARRNARMNGISNCVFQAGDVAEQL 399

Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173
           + L  D     EG+ DV+V NPP
Sbjct: 400 EELAEDG----EGV-DVVVLNPP 417


>gi|268611482|ref|ZP_06145209.1| putative methyltransferase [Ruminococcus flavefaciens FD-1]
          Length = 186

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 14/140 (10%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  ++ +  + RP T+ + ++  +    +IE  DV   LDL  G+G + +  +       
Sbjct: 11  RRLVAPEGMDVRPTTDKVKEAIFSAIQFQIEGADV---LDLFAGSGQMGIEAISRGAK-H 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQS----DWFSSVEGLFDVIVSNPPYIESVI 179
            V +D S +AL     N    G  ER+  + S    D+       FD+I+ +PPY  S I
Sbjct: 67  AVFIDSSNRALRCVHENLRNTGF-ERYSEVISRDSYDYIKLTSQHFDIIILDPPYRHSHI 125

Query: 180 VDCLGLEVRDFDPRISLDGG 199
           V+ L    +        DGG
Sbjct: 126 VNILPFAAKKLK-----DGG 140


>gi|238619836|ref|YP_002914662.1| methylase [Sulfolobus islandicus M.16.4]
 gi|238380906|gb|ACR41994.1| methylase [Sulfolobus islandicus M.16.4]
          Length = 207

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G   
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   ++     F  +    +   L   K N + N        L  D  S +    FDV +
Sbjct: 54  IWSLIMGGKVIFVDINPYAATSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
            NPPY          L V +++  I  S  GG DG
Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|219871611|ref|YP_002475986.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis
           SH0165]
 gi|254783305|sp|B8F6T6|PRMA_HAEPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|219691815|gb|ACL33038.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 294

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     K +G+DI  +A+  +++NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-KAIGIDIDPQAILASQNNAEVNGVADRL 210


>gi|218261867|ref|ZP_03476552.1| hypothetical protein PRABACTJOHN_02223 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223715|gb|EEC96365.1| hypothetical protein PRABACTJOHN_02223 [Parabacteroides johnsonii
           DSM 18315]
          Length = 191

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R   R  +RILD+G GTG +   LL  SP  + VGVD+S   +E A+S   T  V  R
Sbjct: 30  LQRTGLRKGLRILDIGCGTGVLESYLLPYSP-RQIVGVDLSPAMIEKARSKYATPVVDFR 88

Query: 150 FDTLQSDWFSSVEGLFDVIVS 170
               Q+ W    E  FD I++
Sbjct: 89  ---CQNVWDIQGES-FDYIIA 105


>gi|124027170|ref|YP_001012490.1| methylase [Hyperthermus butylicus DSM 5456]
 gi|123977864|gb|ABM80145.1| Methylase [Hyperthermus butylicus DSM 5456]
          Length = 192

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 35/59 (59%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DLG+G G V +   ++    K VGV+I    +E++K+ A   GV++R + ++  +F+
Sbjct: 30  VYDLGSGDGRVVVIAARDFCVEKAVGVEIDPALVEVSKAKARMEGVADRVEIIEDSFFN 88


>gi|94991200|ref|YP_599300.1| Type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS10270]
 gi|94544708|gb|ABF34756.1| Type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS10270]
          Length = 526

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|78188211|ref|YP_378549.1| Mg-protoporphyrin IX methyl transferase [Chlorobium chlorochromatii
           CaD3]
 gi|78170410|gb|ABB27506.1| Magnesium protoporphyrin O-methyltransferase [Chlorobium
           chlorochromatii CaD3]
          Length = 232

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R    +++D A  + L ++       +LD G GTG   + L K    +K   VDI+ + +
Sbjct: 44  RQGHAVMMDKAFDW-LEKLRLPKGATVLDAGCGTGLFSIRLAKAG--YKVKSVDIASQMV 100

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           E A++ A   GV+   D  + +   +V G +D +V
Sbjct: 101 EKARAEATKQGVAGNMD-FEVNTIEAVSGTYDAVV 134


>gi|17989383|ref|NP_542016.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|17985256|gb|AAL54280.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
          Length = 221

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 14/135 (10%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDL 104
            E+  RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL
Sbjct: 31  REAAVRIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDL 86

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFS 159
             GTGA+ L  L     +    V+ S     I + N    G+       R D  Q     
Sbjct: 87  FAGTGALGLEALSRGARYATF-VEESADGRGILRQNIEALGLQGHTKILRRDACQLGIVG 145

Query: 160 SVEGLFDVIVSNPPY 174
           ++E  FD++ ++PPY
Sbjct: 146 TME-PFDLVFADPPY 159


>gi|330881583|gb|EGH15732.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 296

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++   
Sbjct: 140 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 199

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 200 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 242


>gi|325297416|ref|YP_004257333.1| RNA methyltransferase, TrmA family [Bacteroides salanitronis DSM
           18170]
 gi|324316969|gb|ADY34860.1| RNA methyltransferase, TrmA family [Bacteroides salanitronis DSM
           18170]
          Length = 474

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 17/115 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A++L ++  RD         + DL TGTG +   + +++   K +
Sbjct: 295 FKVGPKSFYQTNSEQAYNLYKV-ARDFAGLTGNELVYDLYTGTGTIANFVSRQAK--KVI 351

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK N+  NG+           D L  D F    G  DVI+++PP
Sbjct: 352 GIEYVPEAIEDAKVNSELNGIKNTLFYAGDMKDILTED-FIRTHGRPDVIITDPP 405


>gi|219666402|ref|YP_002456837.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
 gi|219536662|gb|ACL18401.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
          Length = 257

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+GTG G    ALL  S  +   G+D S K +E A +NA   G+   F  + S    
Sbjct: 50  KVLDVGTGPG--FFALLMGSMGWDVHGIDCSEKMIETAVANAQKAGIDAEFSVMDSHSLD 107

Query: 160 SVEGLFDVIV 169
             +  FD IV
Sbjct: 108 FPDNTFDYIV 117


>gi|167854908|ref|ZP_02477684.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis
           29755]
 gi|167853975|gb|EDS25213.1| ribosomal protein L11 methyltransferase [Haemophilus parasuis
           29755]
          Length = 294

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     K +G+DI  +A+  +++NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-KAIGIDIDPQAILASQNNAEVNGVADRL 210


>gi|90424781|ref|YP_533151.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB18]
 gi|90106795|gb|ABD88832.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisB18]
          Length = 296

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +++R    +LDLGTGTG + +A  K +   +    DI   ++ +A+ NA  NGV    D 
Sbjct: 150 LKRRSPRNVLDLGTGTGVLAIAAAK-ALQQRVTASDIDPVSVRVARDNARLNGVGHLLDG 208

Query: 153 LQSDWFSSVE----GLFDVIVSN 171
           + +  F+  +      FD++++N
Sbjct: 209 ICAAGFADAQFRQAAPFDLVLAN 231


>gi|262401679|ref|ZP_06078245.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
 gi|262352096|gb|EEZ01226.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP+++ +    ++D+G G G +   +   +P  +    DIS  AL I  S         
Sbjct: 196 TLPKLDGK----VIDIGCGAGVLGCVMATLNPEIELEMTDIS--ALAIRSSQETLQANQL 249

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           R     SD FS     +D IV+NPP+
Sbjct: 250 RGRVYPSDMFSDTGTQYDYIVTNPPF 275


>gi|291615247|ref|YP_003525404.1| methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
 gi|291585359|gb|ADE13017.1| Methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
          Length = 285

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           RD  ++LD+  GTG   L+  K +P  K    D+S + LE+A  NA   G++
Sbjct: 48  RDTSQVLDIAAGTGEPGLSAAKLTPRGKVTLTDLSERMLEVANENAAHRGLA 99


>gi|256810806|ref|YP_003128175.1| methyltransferase small [Methanocaldococcus fervens AG86]
 gi|256794006|gb|ACV24675.1| methyltransferase small [Methanocaldococcus fervens AG86]
          Length = 210

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 19/129 (14%)

Query: 62  NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVR--ILDLGTGTG--AVCLA 114
           ++ + L S    P P+ +L    +D  LA  +      D     ++DLG GTG  A+   
Sbjct: 6   HLEMILDSLKSHPNPKADLEQYTIDGKLASDILFFAVNDFYGNVVIDLGCGTGRLAIGSK 65

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLF 165
           +L      + +G+DI  +++E AK NA    V   F         +   +D     + L 
Sbjct: 66  ILGAK---RAIGIDIDKESIETAKENAKKANVDVDFYCMDIRDVDNEFLNDILGEGKNLK 122

Query: 166 DVIVSNPPY 174
            V++ NPP+
Sbjct: 123 KVVIQNPPF 131


>gi|197334549|ref|YP_002155201.1| methyltransferase [Vibrio fischeri MJ11]
 gi|262828790|sp|B5F9T8|TRMN6_VIBFM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|197316039|gb|ACH65486.1| methyltransferase [Vibrio fischeri MJ11]
          Length = 234

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G GTG + L   + +       +++   A E+A+ N   +   ER   +  D+ S
Sbjct: 39  QILDIGAGTGLLSLMSAQRNSNAHIDAIELMPIAAEVARLNFSQSPWKERLVLIHQDFLS 98

Query: 160 SVEGL-FDVIVSNPPYIES 177
                 +D I+ NPPY  +
Sbjct: 99  YQTAYEYDAIICNPPYFNN 117


>gi|94989256|ref|YP_597357.1| type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS9429]
 gi|94993144|ref|YP_601243.1| Type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS2096]
 gi|94542764|gb|ABF32813.1| type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS9429]
 gi|94546652|gb|ABF36699.1| Type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS2096]
          Length = 526

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSHQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|15965953|ref|NP_386306.1| putative methyltransferase transcription regulator protein
           [Sinorhizobium meliloti 1021]
 gi|15075222|emb|CAC46779.1| Probable transcriptional regulator [Sinorhizobium meliloti 1021]
          Length = 340

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LDLGTGTG +    L E  + +G+GVD S   L +A+SN    G+++
Sbjct: 160 LLDLGTGTGRILQ--LFEGIYRRGIGVDASRDMLAVARSNLDRAGITK 205


>gi|329920434|ref|ZP_08277166.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           SPIN 1401G]
 gi|328936110|gb|EGG32563.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           SPIN 1401G]
          Length = 448

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           V+       + + L   W +  EGL  DVI  +PP
Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|313147266|ref|ZP_07809459.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136033|gb|EFR53393.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 463

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 17/115 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A++L ++  RD         + DL TGTG +   + +++   + +
Sbjct: 286 FKVGPKSFYQTNSGQAYNLYKV-ARDFAGLTGGELVYDLYTGTGTIANFVSRQAR--QVI 342

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 343 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 396


>gi|227827665|ref|YP_002829445.1| methylase [Sulfolobus islandicus M.14.25]
 gi|229584869|ref|YP_002843371.1| methylase [Sulfolobus islandicus M.16.27]
 gi|227459461|gb|ACP38147.1| methylase [Sulfolobus islandicus M.14.25]
 gi|228019919|gb|ACP55326.1| methylase [Sulfolobus islandicus M.16.27]
 gi|323474723|gb|ADX85329.1| methylase [Sulfolobus islandicus REY15A]
 gi|323477451|gb|ADX82689.1| methylase [Sulfolobus islandicus HVE10/4]
          Length = 207

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--A 110
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G   
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           +   ++     F  +    +   L   K N + N        L  D  S +    FDV +
Sbjct: 54  IWSLIMGGKVIFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAI 112

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
            NPPY          L V +++  I  S  GG DG
Sbjct: 113 FNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|149174356|ref|ZP_01852983.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Planctomyces maris DSM 8797]
 gi|148846901|gb|EDL61237.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Planctomyces maris DSM 8797]
          Length = 367

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           SAL+ +    + +D + IL+LG G G++ L L +  P  +   V  S    E  +  AV 
Sbjct: 110 SALSETCQHADIQDGMSILELGCGWGSLTLWLAENYPDSRITAVSNSHSQREYIEQQAVA 169

Query: 144 NGVSERFDTLQSDWFSSV-EGLFDVIVS 170
            GV++R   + +D    + E  +D +VS
Sbjct: 170 RGVADRIQVITADMNEFIPEETYDRVVS 197


>gi|91791810|ref|YP_561461.1| ribosomal protein L11 methyltransferase [Shewanella denitrificans
           OS217]
 gi|123166517|sp|Q12S38|PRMA_SHEDO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91713812|gb|ABE53738.1| LSU ribosomal protein L11P methyltransferase [Shewanella
           denitrificans OS217]
          Length = 293

 Score = 37.4 bits (85), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 4/73 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ++D G G+G + +A LK     K  GVDI  +A++ +++NAV N V ++      +   
Sbjct: 161 EVIDFGCGSGILAIAALKLG-AKKVTGVDIDYQAIDASQANAVRNNVQDQLALYLPE--D 217

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 218 QPEGLIADVLVAN 230


>gi|330508817|ref|YP_004385245.1| methyltransferase [Methanosaeta concilii GP-6]
 gi|328929625|gb|AEB69427.1| methyltransferase, putative [Methanosaeta concilii GP-6]
          Length = 198

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 10/83 (12%)

Query: 95  KRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           + D+  + DLG GTG  A+  AL+      + VGV+I   AL  A+ NA   GV    D 
Sbjct: 43  RNDLGTVCDLGCGTGVLAIGAALMGA----RAVGVEIDKDALATARKNAENLGV--HVDF 96

Query: 153 LQSDWFS-SVEGLFDVIVSNPPY 174
           +++D     +EG+ D ++ NPP+
Sbjct: 97  IRADVRKLELEGI-DTVIMNPPF 118


>gi|254672652|emb|CBA06466.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha275]
          Length = 262

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 134 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 189

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 190 ----QGQFDVVVAN 199


>gi|228990041|ref|ZP_04150014.1| Methyltransferase [Bacillus pseudomycoides DSM 12442]
 gi|228769707|gb|EEM18297.1| Methyltransferase [Bacillus pseudomycoides DSM 12442]
          Length = 250

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 18/138 (13%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           ++ + R  GW DF  ++      T+E   E            + R +  DV  +LD+GTG
Sbjct: 10  YDKVGRSNGW-DFSKLKYVTEGATWEFYEEV-----------IERCKSSDV--LLDIGTG 55

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFD 166
            G   L +   + F   +G+D S   +E A+SN     VS  RF  ++S+        FD
Sbjct: 56  GGENVLRIAPAALFM--IGIDNSSGMIETAQSNLEKASVSNVRFFQMESESLMFPHSFFD 113

Query: 167 VI-VSNPPYIESVIVDCL 183
           ++   + P++ + +   +
Sbjct: 114 IVSCCHAPFVAAEVAKVI 131


>gi|167755129|ref|ZP_02427256.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402]
 gi|237733445|ref|ZP_04563926.1| methyltransferase [Mollicutes bacterium D7]
 gi|167705179|gb|EDS19758.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402]
 gi|229383480|gb|EEO33571.1| methyltransferase [Coprobacillus sp. D7]
          Length = 245

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +DV +I+D GT   A+ L LL +       G++I  +A+++A  N   N +  + + + +
Sbjct: 42  KDVKQIIDFGTNNAAIPL-LLSQRTNRPITGIEIQKEAVDLAIKNIELNNLETQINIVHA 100

Query: 156 DWFSSVEGLFDV--IVSNPPY 174
           D    V+    V  ++ NPP+
Sbjct: 101 DIAEYVKDAKKVGLVICNPPF 121


>gi|55822680|ref|YP_141121.1| type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus CNRZ1066]
 gi|55738665|gb|AAV62306.1| type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus CNRZ1066]
          Length = 534

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    + D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|13357655|ref|NP_077929.1| type I restriction enzyme M protein (fragment) [Ureaplasma parvum
           serovar 3 str. ATCC 700970]
 gi|170762197|ref|YP_001752181.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|183508500|ref|ZP_02689853.2| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
 gi|11357066|pir||E82933 type I restriction enzyme M protein, truncated homolog UU098
           [imported] - Ureaplasma urealyticum
 gi|6899053|gb|AAF30504.1|AE002110_2 type I restriction enzyme M protein (fragment) [Ureaplasma parvum
           serovar 3 str. ATCC 700970]
 gi|168827774|gb|ACA33036.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|182675928|gb|EDT87833.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
          Length = 348

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 72  FEPRPETELLVDSALA-FSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F P+  +ELLV+  L  F+    + +R + ++ D   G+G++ L   K +   K  G +I
Sbjct: 25  FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 84

Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPY 174
           +     +A+ N   + +  ++FD    D       + +  FD IVSNPPY
Sbjct: 85  NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPY 134


>gi|318080044|ref|ZP_07987376.1| Methyltransferase type 12 [Streptomyces sp. SA3_actF]
          Length = 385

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+DLG+GTGA   ALL   P      VD S   L+  +  A   G+  R  T+ +D
Sbjct: 173 IVDLGSGTGAGTFALLARFPEAHVTAVDSSAPHLQRLREKACAAGLDGRVRTVHAD 228


>gi|317486424|ref|ZP_07945251.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6]
 gi|316922334|gb|EFV43593.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6]
          Length = 262

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 9/86 (10%)

Query: 98  VVRILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF------ 150
            +R +DLGTG G V LA LL +    +G G+D + + +  A++N    G S+RF      
Sbjct: 56  TMRFIDLGTGCGVVGLAYLLLKRNICQGFGMDCNPELIAAAQNNTAKLGFSDRFALHTGE 115

Query: 151 --DTLQSDWFSSVEGLFDVIVSNPPY 174
             DT   +          ++++NPP+
Sbjct: 116 LADTRFLENLRMEASPVQLVMANPPW 141


>gi|254519875|ref|ZP_05131931.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA]
 gi|226913624|gb|EEH98825.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA]
          Length = 313

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           SL +  K D   + D+G G+G + +A  K       VGVD+   A+E AK N   N + E
Sbjct: 170 SLEKYVKEDST-VFDVGCGSGILAIAAAKLGSKM-AVGVDLDPVAVESAKENVGYNNL-E 226

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSH 205
               L  +    ++G  D++V+N      +I + + +   D   R+  D G     G+ H
Sbjct: 227 NIQILYGNLVEVIDGKADIVVAN------IIAEVICILTEDV-KRVLKDNGYFITSGIIH 279

Query: 206 YRTIADGVSRHLNKDGLCSVEI 227
            R   D V++ L + G   +EI
Sbjct: 280 DRV--DMVTKKLEETGFEVIEI 299


>gi|212638661|ref|YP_002315181.1| SAM-dependent methyltransferase [Anoxybacillus flavithermus WK1]
 gi|212560141|gb|ACJ33196.1| SAM-dependent methyltransferase [Anoxybacillus flavithermus WK1]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG GTG + + L ++   F   GVD+S + L IA+  A   GV+  F       F 
Sbjct: 38  RLLDLGCGTGELAIRLAEKG--FDVTGVDLSEQMLTIAQMKAEERGVNLSFFQQDMREFG 95

Query: 160 SVEGLFDVIV 169
             E  FD IV
Sbjct: 96  PFEP-FDTIV 104


>gi|182433848|ref|YP_001821567.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|182440875|ref|YP_001828594.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462364|dbj|BAG16884.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178469391|dbj|BAG23911.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 238

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +R+LDLG GTGA   AL+  +P     GVD S   LE A + 
Sbjct: 50  LRVLDLGCGTGASTEALIAAAPLASVTGVDASAGMLERAAAK 91


>gi|119867652|ref|YP_937604.1| methyltransferase type 11 [Mycobacterium sp. KMS]
 gi|126434151|ref|YP_001069842.1| methyltransferase type 11 [Mycobacterium sp. JLS]
 gi|119693741|gb|ABL90814.1| Methyltransferase type 11 [Mycobacterium sp. KMS]
 gi|126233951|gb|ABN97351.1| Methyltransferase type 11 [Mycobacterium sp. JLS]
          Length = 210

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)

Query: 93  IEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +E+R  +   +LD G G G   + L      +  +GVD S +A+E+A++NA   GV+ RF
Sbjct: 34  LERRGAISGAVLDAGCGAGEHTILLTGLG--YDVLGVDFSARAVELARANAAARGVNARF 91

Query: 151 DTLQS 155
           +   +
Sbjct: 92  EVADA 96


>gi|55820777|ref|YP_139219.1| type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus LMG 18311]
 gi|55736762|gb|AAV60404.1| type I restriction-modification system methyltransferase subunit
           [Streptococcus thermophilus LMG 18311]
          Length = 534

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV---GVD 128
           + P+P  +L+  + +AF L R +K+    + D   G+G++ L   + S   + V   G +
Sbjct: 200 YTPQPVAKLM--TQIAF-LGREDKQGFT-LYDATMGSGSLLLNAKRYSRQPQTVVYFGQE 255

Query: 129 ISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++     +A+ N + +GV          DTL  DW +     FD ++ NPPY
Sbjct: 256 LNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPY 307


>gi|19746827|ref|NP_607963.1| type I site-specific deoxyribonuclease [Streptococcus pyogenes
           MGAS8232]
 gi|19749065|gb|AAL98462.1| putative type I site-specific deoxyribonuclease [Streptococcus
           pyogenes MGAS8232]
          Length = 526

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|21911180|ref|NP_665448.1| putative type I site-specific deoxyribonuclease hsdM modification
           subunit [Streptococcus pyogenes MGAS315]
 gi|28896556|ref|NP_802906.1| type I site-specific deoxyribonuclease [Streptococcus pyogenes
           SSI-1]
 gi|21905392|gb|AAM80251.1| putative type I site-specific deoxyribonuclease hsdM modification
           subunit [Streptococcus pyogenes MGAS315]
 gi|28811810|dbj|BAC64739.1| putative type I site-specific deoxyribonuclease [Streptococcus
           pyogenes SSI-1]
          Length = 526

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|198426404|ref|XP_002120567.1| PREDICTED: similar to Williams-Beuren syndrome chromosome region
           27-like [Ciona intestinalis]
          Length = 231

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 6/109 (5%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTN 144
           A +L   E++ V ++LDLG+GTG V ++L K    F+G    +D + + L++AK   + N
Sbjct: 53  AATLLSEEQKKVFKVLDLGSGTGLVGVSLRKFG--FQGEVTALDGAAEMLQLAKKKNIYN 110

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDP 192
              +   TL        +  FD+I+S   +  +++  DCL    R   P
Sbjct: 111 DCHQHILTLNHP-LPYPDDNFDLIISVGGFGNNMMQPDCLQEVFRVLKP 158


>gi|19074311|ref|NP_585817.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY)
           [Encephalitozoon cuniculi GB-M1]
 gi|19068953|emb|CAD25421.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY)
           [Encephalitozoon cuniculi GB-M1]
          Length = 164

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 18/106 (16%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D +EP  +T  L+D+     L R E  ++  +LDLGT TG +   L K +     V  D+
Sbjct: 2   DWYEPGEDTYTLMDA-----LER-EGLEMKIVLDLGTSTGVITEQLRKRNTV---VSTDL 52

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           + +ALE  +   +      R D L S    SV    DV+V NPPY+
Sbjct: 53  NIRALESHRGGNLV-----RADLLCSINQESV----DVVVFNPPYV 89


>gi|95928734|ref|ZP_01311480.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM
           684]
 gi|95135079|gb|EAT16732.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM
           684]
          Length = 198

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +E  +   ILDLG+GTG + +A LK       V +DI   A+   + N+  NGV   
Sbjct: 53  LEDLEGVNGATILDLGSGTGILAIAALKLGA-RSAVCIDIDPAAVATCRLNSQLNGVDAD 111

Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171
            D +     +  E  +D++++N
Sbjct: 112 IDHVCGTLSNLPEAAYDLVLAN 133


>gi|256617125|ref|ZP_05473971.1| type I restriction-modification system M subunit [Enterococcus
           faecalis ATCC 4200]
 gi|256596652|gb|EEU15828.1| type I restriction-modification system M subunit [Enterococcus
           faecalis ATCC 4200]
          Length = 304

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)

Query: 107 GTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERF-----DTLQSDW 157
           G+G++ L +   L      K  G +++     +AK N + +GV +E       DTL  DW
Sbjct: 2   GSGSLMLNVRNYLTHPDNVKYHGQELNTTTYNLAKMNLILHGVDAEEMNLRNGDTLNKDW 61

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            +     FD +V NPPY  +   D   L+   F+
Sbjct: 62  PTDEPYTFDAVVMNPPYSANWSADTTFLDDSRFN 95


>gi|33865023|ref|NP_896582.1| hypothetical protein SYNW0487 [Synechococcus sp. WH 8102]
 gi|33638707|emb|CAE07002.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 389

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD G GTG     L   +P  + +G+DIS  AL +A+     +G + +   L+ +  S
Sbjct: 61  RILDAGCGTGVSTDYLCHLNPGAEVLGIDISEGALAVARERLQRSGAAAQVSQLRQEQRS 120

Query: 160 ----SVEGLFDVIVS 170
                 EG FD I S
Sbjct: 121 LLDLESEGPFDYINS 135


>gi|27904799|ref|NP_777925.1| ribosomal RNA small subunit methyltransferase C [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38503321|sp|Q89AI2|RSMC_BUCBP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|27904197|gb|AAO27030.1| ribosomal RNA small subunit methyltransferase C [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 326

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G +   L    P  K   +D +  ALE +K    +N V    +   S+ +S+
Sbjct: 185 VLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAALESSKLTLTSNNVCG--EIFPSNIYSN 242

Query: 161 VEGL-FDVIVSNPP 173
           V    FD+I+SNPP
Sbjct: 243 VHYQNFDLIISNPP 256


>gi|223932616|ref|ZP_03624616.1| putative RNA methylase [Streptococcus suis 89/1591]
 gi|330832240|ref|YP_004401065.1| putative RNA methylase [Streptococcus suis ST3]
 gi|223898726|gb|EEF65087.1| putative RNA methylase [Streptococcus suis 89/1591]
 gi|329306463|gb|AEB80879.1| putative RNA methylase [Streptococcus suis ST3]
          Length = 388

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            G DI  + +EIAK NA   GV +       R   L+SD    + G   VI+SNPPY E 
Sbjct: 260 AGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRSD---KING---VIISNPPYGER 313

Query: 178 VIVD 181
           ++ D
Sbjct: 314 LLDD 317


>gi|302417188|ref|XP_003006425.1| methyltransferase [Verticillium albo-atrum VaMs.102]
 gi|261354027|gb|EEY16455.1| methyltransferase [Verticillium albo-atrum VaMs.102]
          Length = 282

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF LP I+  D  RILD+G G G +        P  + VG+DIS + L  A+S +V  G+
Sbjct: 36  AFVLPLIDPAD--RILDVGCGPGTITTGFATIVPQGEVVGIDISDEVLATARS-SVPAGL 92

Query: 147 SERF 150
           S  F
Sbjct: 93  SNIF 96


>gi|260583861|ref|ZP_05851609.1| SmtA protein [Granulicatella elegans ATCC 700633]
 gi|260158487|gb|EEW93555.1| SmtA protein [Granulicatella elegans ATCC 700633]
          Length = 258

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +++LD+GTG G   + +L+E  +   +G+D+S K LE+AK N    G
Sbjct: 48  LKVLDIGTGPGFFTI-ILEELGYTNIMGIDVSEKMLEVAKENIQKYG 93


>gi|253571414|ref|ZP_04848820.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838622|gb|EES66707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|239905332|ref|YP_002952071.1| putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Desulfovibrio magneticus RS-1]
 gi|239795196|dbj|BAH74185.1| putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Desulfovibrio magneticus RS-1]
          Length = 242

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 27/47 (57%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +LD  TGTG V LA+ +  P    +G+D S   L++A++ A    V+
Sbjct: 60  VLDAATGTGEVALAIRRRRPGLTVIGLDFSPAMLDVARAKAAKAQVA 106


>gi|228995075|ref|ZP_04154823.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
 gi|228764670|gb|EEM13471.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
          Length = 207

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +ILD+GTG+G++ + L K  P     G+D      E +K+    NA   GVS+R D L++
Sbjct: 40  KILDIGTGSGSLIIKLAKTFPKSFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99

Query: 156 DW----FSSVEGLFDVIVS 170
                 F+  E  FD+IVS
Sbjct: 100 SAAELPFNDDE--FDIIVS 116


>gi|139474406|ref|YP_001129122.1| type I restriction-modification system M protein [Streptococcus
           pyogenes str. Manfredo]
 gi|134272653|emb|CAM30920.1| type I restriction-modification system M protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 526

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|120603527|ref|YP_967927.1| hypothetical protein Dvul_2484 [Desulfovibrio vulgaris DP4]
 gi|120563756|gb|ABM29500.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
          Length = 438

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 29/54 (53%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           DLGTG G V LALL  S    GVG++     +  A+ NA   G+S RF    +D
Sbjct: 166 DLGTGCGVVGLALLLGSSRLSGVGIEQDAALVNAARVNAHRLGLSTRFTVHHAD 219


>gi|15669072|ref|NP_247877.1| hypothetical protein MJ_0882 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2842581|sp|Q58292|Y882_METJA RecName: Full=Putative protein methyltransferase MJ0882
 gi|1499712|gb|AAB98886.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 197

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158
           ILDLG G G + +AL  E         DI+ +A+++AK N   N + + +D   + SD +
Sbjct: 59  ILDLGCGYGVIGIALADEVK--STTMADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLY 115

Query: 159 SSVEG-LFDVIVSNPP 173
            +V+   ++ I++NPP
Sbjct: 116 ENVKDRKYNKIITNPP 131


>gi|85714020|ref|ZP_01045009.1| 2-dehydropantoate 2-reductase [Nitrobacter sp. Nb-311A]
 gi|85699146|gb|EAQ37014.1| 2-dehydropantoate 2-reductase [Nitrobacter sp. Nb-311A]
          Length = 324

 Score = 37.0 bits (84), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           T+Q+D  S   G FD+I+ +    +  + D +    R   PR ++   ++G+ H RT+  
Sbjct: 77  TVQADGLS---GTFDLILLSCKAFD--LEDAIASFARAAGPRTAIIPLLNGMRHLRTLDA 131

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
              R     GLCS+ +  N+K +VV +   + L      +D G ++RV
Sbjct: 132 VFGRERVLGGLCSLAVTLNEKREVVHLAPMQSLRFGE--RDGGMSERV 177


>gi|228995690|ref|ZP_04155353.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17]
 gi|229003319|ref|ZP_04161149.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4]
 gi|228757937|gb|EEM07152.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4]
 gi|228764067|gb|EEM12951.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17]
          Length = 465

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 64/121 (52%), Gaps = 17/121 (14%)

Query: 62  NVRLTLSSDTFEP--RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F    R +T++L D AL ++  +++  + V  +D   G G++ L L +++
Sbjct: 285 DIKFAISARSFYQVNREQTKVLYDKALEYA--KLDGNETV--IDAYCGIGSISLFLAQKA 340

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLF-DVIVSNP 172
              K  GV+I  +A+E A  NA  N ++         + +  +W+   EG+  D IV +P
Sbjct: 341 K--KVYGVEIVPEAIEDANRNAALNNMTNAEFAVGEAEVVIPNWYK--EGVIADTIVVDP 396

Query: 173 P 173
           P
Sbjct: 397 P 397


>gi|223998224|ref|XP_002288785.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975893|gb|EED94221.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 417

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 28/48 (58%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           RI+DLG GTG +   +  E P+ +  GVD+S +  +I++     NG S
Sbjct: 297 RIVDLGCGTGLLGELVANEMPWVEVYGVDLSQRMADISRERKTVNGTS 344


>gi|118388069|ref|XP_001027135.1| dimethyladenosine transferase family protein [Tetrahymena
           thermophila]
 gi|89308905|gb|EAS06893.1| dimethyladenosine transferase family protein [Tetrahymena
           thermophila SB210]
          Length = 345

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG +   LL+++   K + V+I  + +         +  + +F+ +Q D  S+
Sbjct: 39  VLEIGPGTGNLTALLLEKAK--KVIAVEIDPRMVAELNKRFKYSQHAHKFELIQGDAIST 96

Query: 161 VEGLFDVIVSNPPY 174
               FDV V+N PY
Sbjct: 97  EFPFFDVCVANTPY 110


>gi|47459066|ref|YP_015928.1| O-methyltransferase putative nucleic acid modification enzyme
           [Mycoplasma mobile 163K]
 gi|47458395|gb|AAT27717.1| O-methyltransferase putative nucleic acid modification enzyme
           [Mycoplasma mobile 163K]
          Length = 257

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 18/156 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           IL++GT   A+ + + + +   K   +++  KA+ +A  N + N   E+   + +++ S 
Sbjct: 51  ILEIGTNNAALAIFVSERNKNIKIDAIELQKKAIHLANFNVIMNSKEEQISIIHANFNSF 110

Query: 160 ------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 +    +D I+ NPP+ +      +G        +  L    D   ++  +  G 
Sbjct: 111 WKKHNKNQAKKYDSIICNPPFYQ------IGKRQLKNVSKEKLIATYDLKLNFDQLIKGA 164

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRI-----FESRKL 244
           S+ + + G  SV I   + +D   I     FE +K+
Sbjct: 165 SKIIKQKGYFSVVIPTERSIDFFTILRKYDFEPKKV 200


>gi|78062726|ref|YP_372634.1| methylase involved in ubiquinone/menaquinone biosynthesis-like
           [Burkholderia sp. 383]
 gi|77970611|gb|ABB11990.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
           protein [Burkholderia sp. 383]
          Length = 282

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKAL 134
           P  +LLVD+A   S           +LD+G GTGAV LA+ +      +  G+DIS + +
Sbjct: 35  PLEKLLVDAAAPSS--------ARSVLDVGCGTGAVTLAIARRLGADVQCTGIDISARMI 86

Query: 135 EIAKSNAVTNGVSERF 150
           + A++ A  + V  RF
Sbjct: 87  DAAQARAERSSVPVRF 102


>gi|86148148|ref|ZP_01066447.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222]
 gi|85834065|gb|EAQ52224.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222]
          Length = 340

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106
           W   Y V +   S T +  P           ++LL+D+     LP+++ +    +LD G 
Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G +   +    P  +    DIS  A+  +++    NG++   +   SD +S     + 
Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267

Query: 167 VIVSNPPY 174
            I+SNPP+
Sbjct: 268 FIISNPPF 275


>gi|254804314|ref|YP_003082535.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha14]
 gi|254667856|emb|CBA03901.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha14]
          Length = 330

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 257

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 258 ----QGQFDVVVAN 267


>gi|239620771|ref|ZP_04663802.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239516347|gb|EEQ56214.1| trans-aconitate 2-methyltransferase [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 141

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 14/91 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV--- 142
           LA  LP  +   V R+LD+G G G     L +  P  K +GVD S   +E A+       
Sbjct: 29  LAMQLP-PDDGSVTRVLDIGCGPGNSTAVLRERYPHAKILGVDSSPVMIETARKTYPDID 87

Query: 143 --TNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
                VS R D L +D        FDV+ SN
Sbjct: 88  FQLCDVSARLDELPAD--------FDVVFSN 110


>gi|221310470|ref|ZP_03592317.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314793|ref|ZP_03596598.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319716|ref|ZP_03601010.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323993|ref|ZP_03605287.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767585|ref|NP_390423.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321312029|ref|YP_004204316.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5]
 gi|251757309|sp|P54460|PRMA_BACSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225185213|emb|CAB14487.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018303|gb|ADV93289.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5]
          Length = 311

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 30/141 (21%)

Query: 56  GWRDFYN-------VRLTLSSDTFEPRPETELLV--DSALAF-------------SLPR- 92
            W+ +Y+         +  + + + P    EL++  D  +AF             +L R 
Sbjct: 113 AWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALERF 172

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++K D  +++D+GTG+G  ++  A+L+          D+   A+E A+ N   N VS+  
Sbjct: 173 VQKGD--KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIA 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
              Q++    +EG  DVIV+N
Sbjct: 228 QVKQNNLLDGIEGEHDVIVAN 248


>gi|104780129|ref|YP_606627.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           entomophila L48]
 gi|226712963|sp|Q1IEU2|RSMC_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|95109116|emb|CAK13813.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas entomophila L48]
          Length = 332

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 2/100 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  ++      +LD G G G +   + +  P  +   +D+   A+  ++   
Sbjct: 176 LDKGTALLLEHLDGLPSGHVLDFGCGAGVLGATIKRRYPQSQVTLLDVDAFAVAASRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG+  +   +  D   +  G  D+I+SNPP+   V  D
Sbjct: 236 AANGLEGQ--VISGDGIDAAPGELDLILSNPPFHTGVHTD 273


>gi|194467963|ref|ZP_03073949.1| type I restriction-modification system, M subunit [Lactobacillus
           reuteri 100-23]
 gi|194452816|gb|EDX41714.1| type I restriction-modification system, M subunit [Lactobacillus
           reuteri 100-23]
          Length = 549

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 22/143 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVS------ERFD 151
            + D   G+G++ L +  + P    K  G +++     +A+ N + + V       +  D
Sbjct: 228 EVYDFACGSGSLLLTVQDQVPNRRLKYAGQELNTTTYNLARMNLMMHDVRYQNMTLKNAD 287

Query: 152 TLQSDWFSSVE--GL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI--DG 202
           TL+ DW   ++  G+     FD++V+NPPY  S   D    +++  DPR    G +    
Sbjct: 288 TLEMDWPDGIDEHGVDHPHSFDMVVANPPY--SARWDNNDNKLK--DPRFKEYGALAPKT 343

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
            + Y  +  G+  HL +DG  ++
Sbjct: 344 KADYAFLLHGL-YHLKQDGTMAI 365


>gi|20094927|ref|NP_614774.1| rRNA/ tRNA methylase [Methanopyrus kandleri AV19]
 gi|19888169|gb|AAM02704.1| Predicted rRNA/ tRNA methylase [Methanopyrus kandleri AV19]
          Length = 196

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTG G   L+   +    + V  D++  A+  A+ NA  N ++   D    D F 
Sbjct: 43  RVLDVGTGCGIQGLSAAAKG--CEVVATDVNPAAVHCARWNAHLNDLN--IDVRVGDLFE 98

Query: 160 SV-EGLFDVIVSNPPYI 175
            V +  FD+++ NPPY+
Sbjct: 99  PVRDERFDIVLFNPPYL 115


>gi|56808773|ref|ZP_00366489.1| COG0286: Type I restriction-modification system methyltransferase
           subunit [Streptococcus pyogenes M49 591]
 gi|209560056|ref|YP_002286528.1| Putative type I site-specific deoxyribonuclease [Streptococcus
           pyogenes NZ131]
 gi|209541257|gb|ACI61833.1| Putative type I site-specific deoxyribonuclease [Streptococcus
           pyogenes NZ131]
          Length = 526

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|325117932|emb|CBZ53483.1| hypothetical protein NCLIV_032700 [Neospora caninum Liverpool]
          Length = 560

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 7/87 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDTLQ 154
           +++LD+G G   V   L      +  VG DIS ++LE+A+ N   NG+      R     
Sbjct: 305 IKVLDIGVGANCVYPLLGCAEYGWTFVGSDISKRSLELARENVNLNGLGSCVHLRHQQDP 364

Query: 155 SDWFSSV---EGLFDVIVSNPPYIESV 178
             +FS V     +F + + NPP+ ES 
Sbjct: 365 VKFFSGVVENGEMFALSMCNPPFHEST 391


>gi|256830634|ref|YP_003159362.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM
           4028]
 gi|256579810|gb|ACU90946.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM
           4028]
          Length = 284

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G + +A +K      G G+DI   A++ A  NA  N V++ F        + +
Sbjct: 153 LDLGTGSGILGIAAVKLG--LVGQGLDIDPVAVDNAHENAALNAVTDAFRPATGS-VTDI 209

Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  FD I++N   + + ++D       D   R+S  G +      R  AD V +    
Sbjct: 210 PREQHFDCILAN--ILANPLIDM----AEDICARLSRPGVLILSGILREQADRVVQAYTL 263

Query: 220 DGLCSVEIGYN 230
            GL + +I Y+
Sbjct: 264 QGLAAPQIAYS 274


>gi|254409490|ref|ZP_05023271.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
 gi|196183487|gb|EDX78470.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
          Length = 223

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + V RILDLGTG G + LALLK + P+ + + +D S   L+ AK     +   E    + 
Sbjct: 46  KTVKRILDLGTGDGRL-LALLKIDRPYVESIAIDFSPTMLDAAKQRFAGD---ETVKIIA 101

Query: 155 SDWFSSVE--GLFDVIVSN 171
            D    +   G+FD IVS+
Sbjct: 102 HDLDHPLPELGIFDAIVSS 120


>gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
 gi|196178694|gb|EDX73692.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
          Length = 264

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 76  PETELLVDSALAFSLPRIEKR-----------DVVRILDLGTGTGAVCLALLKESPFFKG 124
           P   +  D+  A++ P  E R              RILDLG GTG+  L L +  P    
Sbjct: 55  PIAAITYDTVTAYASPPNETRIREQLITTIENQPSRILDLGCGTGSTTLMLKQAFPEAVV 114

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV------SNPPYIESV 178
           +G+D+S   L +A   A   G+  ++    ++     +  FD++         PP I  +
Sbjct: 115 IGLDLSPYMLIVADYKAEQAGLDIQWQHGLAEAAGFDDASFDLVTVSMVLHETPPQISQL 174

Query: 179 IVD 181
           IV 
Sbjct: 175 IVQ 177


>gi|171057155|ref|YP_001789504.1| cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii
           SP-6]
 gi|170774600|gb|ACB32739.1| Cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii
           SP-6]
          Length = 421

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 18/93 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+L++G G GAV  ++ +E    +G    GV +S + L+ A+      G++ER D    D
Sbjct: 207 RVLEIGCGWGAVAESVARE----RGAHLTGVTLSTEQLDYARQRLADAGLAERADLRLQD 262

Query: 157 WFSSVEGLFDVIVS-----------NPPYIESV 178
           +    +  FD ++S            P Y E+V
Sbjct: 263 YRDIADAPFDAVISIEMFEAVGRSYWPSYFETV 295


>gi|134101248|ref|YP_001106909.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007762|ref|ZP_06565735.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913871|emb|CAM03984.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 348

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 14/99 (14%)

Query: 90  LPRIEKRDV-----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           +P +E  D       R+ DLG G G+  + + +  P    VG D   +++E+A+  A   
Sbjct: 156 IPALEGVDAKLTAGARVADLGCGLGSTSVLIAQAYPRTTVVGSDYHAESIELARKQAARA 215

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           GV++R     S   S   G FD++          + DCL
Sbjct: 216 GVTDRVTFEVSTAQSFTGGDFDLV---------TMFDCL 245


>gi|146313175|ref|YP_001178249.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter sp. 638]
 gi|229564328|sp|A4WER8|RLMG_ENT38 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|145320051|gb|ABP62198.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Enterobacter sp. 638]
          Length = 378

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
            I+DLG G G V L LL+++P    +  D S  A+  ++ N  TN     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVVGLTLLEKNPEASVLFTDESPMAVASSRLNVETNMPEALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ ++ NPP+
Sbjct: 291 LSGVEPFRFNAVLCNPPF 308


>gi|61162125|dbj|BAD91052.1| Fc1-cadherin [Folsomia candida]
          Length = 1565

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 17/97 (17%)

Query: 152  TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS-----HY 206
            +LQ ++ +S  GL   I  N P  +S + D + LE+RD  P + +D G  G+S     H 
Sbjct: 1196 SLQVEFMASKSGL---IFYNGPIYQSSVTDFMSLELRDGKPMLLMDYGT-GVSRLEIEHS 1251

Query: 207  RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              +ADG+S          V I +N     +R+ E RK
Sbjct: 1252 PMLADGLSH--------KVHITWNPSAISMRVDECRK 1280


>gi|9955209|pdb|1DUS|A Chain A, Mj0882-A Hypothetical Protein From M. Jannaschii
          Length = 194

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWF 158
           ILDLG G G + +AL  E         DI+ +A+++AK N   N + + +D   + SD +
Sbjct: 56  ILDLGCGYGVIGIALADEVKST--TXADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLY 112

Query: 159 SSVEG-LFDVIVSNPP 173
            +V+   ++ I++NPP
Sbjct: 113 ENVKDRKYNKIITNPP 128


>gi|327458795|gb|EGF05143.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           sanguinis SK1057]
          Length = 182

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD   G+G + +  +      + V V+   +A  I   N       ERFD L+ +   
Sbjct: 47  RVLDFYAGSGGLAIEAISRG-MEEAVLVEKDRRAQAIISENIQMTKEPERFDLLKMESGR 105

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E ++ D   LE R             +  + L   I GL 
Sbjct: 106 ALEMLTGSFDLVLLDPPYAKEQIVEDLEKLEERQLLGQDVLVVCETEKEVELPEEIAGLG 165

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 166 IWKQKIYGISK 176


>gi|319405993|emb|CBI79625.1| ribosomal protein L11 methyltransferase [Bartonella sp. AR 15-3]
          Length = 289

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           I+  +    LDLGTG+G  A+ + +LK  P       DI   A+++AK N   NGV+E  
Sbjct: 146 IQDENPQNALDLGTGSGVLAIGIVMLKPIPVL---AADIDPIAVQVAKHNIRFNGVTEHV 202

Query: 151 DTL-----QSDWFSSVEGLFDVIVSN 171
             +     + D  +S    FD+IV+N
Sbjct: 203 TAVTITDFRDDKVASC-APFDLIVAN 227


>gi|308389961|gb|ADO32281.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis alpha710]
          Length = 330

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   D L    
Sbjct: 202 VLDYGCGSGILTIAALKLG-AGSAVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDGLP--- 257

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 258 ----QGQFDVVVAN 267


>gi|298370003|ref|ZP_06981319.1| ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298281463|gb|EFI22952.1| ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 295

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+  +  NA  N V   F   D L    
Sbjct: 167 VLDYGCGSGILTIAALKLGA-GSAVGVDIDEQAIRASNDNAAQNDVQAHFYLPDGL---- 221

Query: 158 FSSVEGLFDVIVSN 171
               +G FDV+V+N
Sbjct: 222 ---PQGQFDVVVAN 232


>gi|256822115|ref|YP_003146078.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis
           DSM 16069]
 gi|256795654|gb|ACV26310.1| ubiquinone biosynthesis O-methyltransferase [Kangiella koreensis
           DSM 16069]
          Length = 239

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G +  A+ KE    +  G+D+    LE+AK + + +G+   +  + ++ F+
Sbjct: 58  KVLDIGCGGGILTEAMAKEGA--QATGIDMGDMPLEVAKLHMLESGLDIDYQKITAEEFA 115

Query: 160 SVE-GLFDVI-----VSNPPYIESVIVDCLGL 185
               G FDV+     + + P   S+I  C  L
Sbjct: 116 EQHAGQFDVVTCLEMLEHVPDPSSIIKACRKL 147


>gi|225011827|ref|ZP_03702265.1| RNA methyltransferase, TrmA family [Flavobacteria bacterium
           MS024-2A]
 gi|225004330|gb|EEG42302.1| RNA methyltransferase, TrmA family [Flavobacteria bacterium
           MS024-2A]
          Length = 471

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTL 153
           + DL TGTG + L+L K+    K +GV+   +A+E A  NA  N        V +  D  
Sbjct: 325 VYDLYTGTGTIALSLAKQCA--KIIGVESVPEAIEAANENATFNKIKNATFEVGDMKDCF 382

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D F    G  +V++++PP
Sbjct: 383 NDD-FIKRHGKAEVVITDPP 401


>gi|20429104|emb|CAD24416.1| hypothetical protein [Paracoccus zeaxanthinifaciens]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG G G   L L    P  +  G++       +A  NA   G+    D L  D    
Sbjct: 44  VLELGCGAGVASLCLAARVPGLRCTGLERQADYAALALRNAQECGLP--LDVLTGDLSDP 101

Query: 161 VEGL----FDVIVSNPPY 174
             GL    FD ++ NPPY
Sbjct: 102 PAGLRGRGFDHVIMNPPY 119


>gi|15645091|ref|NP_207261.1| type I restriction enzyme M protein (hsdM) [Helicobacter pylori
           26695]
 gi|2313567|gb|AAD07525.1| type I restriction enzyme M protein (hsdM) [Helicobacter pylori
           26695]
          Length = 487

 Score = 37.0 bits (84), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 21/91 (23%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNGVSERF 150
           V+I D   GTG + +AL  +      +G D        IS K+L + K N + N ++   
Sbjct: 231 VKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSL 284

Query: 151 ------DTLQSDWFSS-VEGLFDVIVSNPPY 174
                 +TL + + S   +G  D IVSNPP+
Sbjct: 285 RNAIEGNTLTNPYHSKDFKGKMDYIVSNPPF 315


>gi|317009085|gb|ADU79665.1| type I restriction enzyme M protein [Helicobacter pylori India7]
          Length = 544

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 21/91 (23%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVD--------ISCKALEIAKSNAVTNGVSERF 150
           V+I D   GTG + +AL  +      +G D        IS K+L + K N + N ++   
Sbjct: 231 VKIYDPSAGTGTLLMALAHQ------IGTDSCTLYAQDISQKSLRMLKLNLILNDLTHSL 284

Query: 151 ------DTLQSDWFSS-VEGLFDVIVSNPPY 174
                 +TL + + S   +G  D IVSNPP+
Sbjct: 285 KNAIEGNTLTNPYHSKDFKGKMDYIVSNPPF 315


>gi|229819569|ref|YP_002881095.1| Methyltransferase type 12 [Beutenbergia cavernae DSM 12333]
 gi|229565482|gb|ACQ79333.1| Methyltransferase type 12 [Beutenbergia cavernae DSM 12333]
          Length = 257

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/69 (23%), Positives = 36/69 (52%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G G + L  L  +P  +G+G+D+  +A+    + A   G+++R + +  D    
Sbjct: 41  VVDIGCGWGELLLRTLAAAPTARGLGLDLDAEAVAHGTATAAARGLADRVELVAGDAKEH 100

Query: 161 VEGLFDVIV 169
           +    D ++
Sbjct: 101 LPDAVDAVI 109


>gi|126663522|ref|ZP_01734519.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
           BAL38]
 gi|126624470|gb|EAZ95161.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
           BAL38]
          Length = 302

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVS 147
           I+ +  +RILD+G G   +   +      ++ VG +I  +A E A+ N  +N      V+
Sbjct: 103 IQTKHKIRILDVGIGANCIYPIIGVSEYDWRFVGSEIDKQAFEAAQENINSNQKLKENVA 162

Query: 148 ERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
            R    + + F ++   E  FD+ + NPP+  S
Sbjct: 163 LRLQNSKRNIFKNIILPEDKFDMTICNPPFHSS 195


>gi|146299059|ref|YP_001193650.1| methyltransferase small [Flavobacterium johnsoniae UW101]
 gi|262828313|sp|A5FKD7|TRMN6_FLAJ1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|146153477|gb|ABQ04331.1| methyltransferase small [Flavobacterium johnsoniae UW101]
          Length = 235

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157
           ILD+G GTG + L L + +   +   ++I   A E A  N   +   +R   F     ++
Sbjct: 38  ILDIGAGTGIIALMLAQRTHAEQIDALEIDEDAYEQAVENFEASPWGDRLFCFHAGLDEF 97

Query: 158 FSSVEGLFDVIVSNPPY 174
               E  +D+IVSNPP+
Sbjct: 98  IEEPEDEYDLIVSNPPF 114


>gi|332711922|ref|ZP_08431852.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332349250|gb|EGJ28860.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 241

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 14/127 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  ++L+LG GTG +    ++  P  +  G+D +   LEIAK       +  +   +++D
Sbjct: 36  DGRQVLELGVGTGLLAQKYIELDPTCEFTGIDFTASMLEIAKQR-----LGNQVKLIEAD 90

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +  +   FDV +SN            G+  +    +    G + GL   R     V+R
Sbjct: 91  AVTMDLNAKFDVGISNG--------GVWGILDQGDQAQWQFGGHVPGLEANRQGLANVAR 142

Query: 216 HLNKDGL 222
           HL + GL
Sbjct: 143 HLKEGGL 149


>gi|330964993|gb|EGH65253.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 332

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|254719941|ref|ZP_05181752.1| methyltransferase [Brucella sp. 83/13]
          Length = 187

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S +   I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|171058002|ref|YP_001790351.1| O-methyltransferase family protein [Leptothrix cholodnii SP-6]
 gi|170775447|gb|ACB33586.1| O-methyltransferase family 2 [Leptothrix cholodnii SP-6]
          Length = 363

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 6/88 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD A + +LP     D   ++DLG G G +   +L+  P  +GV  D+   A++ A+++ 
Sbjct: 169 VDLARSPALP-----DAGVVIDLGGGHGELLAEVLRARPGLRGVLFDLD-HAVDGAQAHL 222

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIV 169
              GV+ER      D+F+++    DV++
Sbjct: 223 REAGVAERVTVTSGDFFAALPRPVDVVL 250


>gi|89890519|ref|ZP_01202029.1| RNA methyltransferase [Flavobacteria bacterium BBFL7]
 gi|89517434|gb|EAS20091.1| RNA methyltransferase [Flavobacteria bacterium BBFL7]
          Length = 485

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 17/105 (16%)

Query: 82  VDSALAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +S  AF L +I  RD         + DL TGTG +   + K++     VG++    A+E
Sbjct: 317 TNSKQAFELYKI-TRDFAGLTGEELVYDLYTGTGTIAQFVAKKANHV--VGIESVPVAIE 373

Query: 136 IAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            AK+NA  NG+        +  D   +D F +  G  DV++++PP
Sbjct: 374 DAKANAAHNGIDNTTFFAGDMRDVFTAD-FIAEHGAPDVVITDPP 417


>gi|327190724|gb|EGE57805.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CNPAF512]
          Length = 419

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RIL++G+G G + + L + +      G+ +S + L+++++ A   G+SER      D+ +
Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRTRAEKRGLSERVRFELQDYRT 235

Query: 160 SVEGLFDVIVS 170
                FD IVS
Sbjct: 236 MTGRKFDRIVS 246


>gi|260771831|ref|ZP_05880749.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           metschnikovii CIP 69.14]
 gi|260613123|gb|EEX38324.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           metschnikovii CIP 69.14]
          Length = 340

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 11/97 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL+DS     LP ++ +    +LD G G G +   +   +P  +    DIS  A+  +
Sbjct: 190 SQLLLDS-----LPSLQGK----VLDFGCGAGVLGCVMSILNPEIQLEMCDISALAIYSS 240

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           ++    NG++ R     SD +S     +  IV+NPP+
Sbjct: 241 QATLAANGLTGR--VFASDVYSDTGQDYQSIVTNPPF 275


>gi|240277076|gb|EER40586.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 454

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 82/220 (37%), Gaps = 63/220 (28%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPRIE 94
           L   + R  +   +  ILG + F  + +        PRPETE     V + L   L    
Sbjct: 88  LREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLAPTR 147

Query: 95  KRDV-------------VRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137
           ++D+             +RI+DL TGTG + L L        P  +   VDIS +AL++A
Sbjct: 148 QKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRALKLA 207

Query: 138 KSNAVTN----GVSERF---------DTLQSDWFSSVEGL-------------------- 164
           + N   N     +SER          D L     S + GL                    
Sbjct: 208 RENLKHNIALGMLSERAREEVSFVKGDVLSG--LSELSGLCSSSVTPASKTAAAAAAAAE 265

Query: 165 ------FDVIVSNPPYIESV--IVDCLGLEVRDFDPRISL 196
                   +++SNPPYI             VR ++PR++L
Sbjct: 266 PEINPVITILLSNPPYISPAQFANGTTARSVRRYEPRLAL 305


>gi|271963286|ref|YP_003337482.1| hypothetical protein Sros_1748 [Streptosporangium roseum DSM 43021]
 gi|270506461|gb|ACZ84739.1| hypothetical protein Sros_1748 [Streptosporangium roseum DSM 43021]
          Length = 247

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 54/140 (38%), Gaps = 25/140 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R +     RILDLG G     L  L+  P     GVDIS  AL  A+  A   G+S+R
Sbjct: 29  LTRAKLAPGARILDLGCGEAPWVLRALELHPEAVADGVDISEHALTAAQKAADQRGLSDR 88

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                        GL  V  +          D  G E  D    +      DGL+   T+
Sbjct: 89  L------------GLHHVPAA----------DFTGTEPYDLVLCVGSTHAFDGLT--ATM 124

Query: 210 ADGVSRHLNKDGLCSVEIGY 229
            D + RHL   GL  V  G+
Sbjct: 125 QD-IRRHLRPGGLALVGEGF 143


>gi|229008418|ref|ZP_04165879.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
 gi|228752855|gb|EEM02423.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
          Length = 211

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 12/80 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +ILD+GTG+G++ + L K  P     G+D      E +K+    NA   GVS+R D L++
Sbjct: 40  KILDIGTGSGSLIIKLAKTFPKPFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99

Query: 156 DWFSSVE-----GLFDVIVS 170
              S+ E       FD+IVS
Sbjct: 100 ---SAAELPFNDDEFDIIVS 116


>gi|255659201|ref|ZP_05404610.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
           20544]
 gi|260848653|gb|EEX68660.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
           20544]
          Length = 314

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+ D+GTG+G + +A  K     + V +D    A  +A+ N   N V +R  T  SD  
Sbjct: 176 MRVFDVGTGSGVLAVAAAKLGA-GEVVAMDYDRTAATVAQENVERNHVEDRVTTGVSDLL 234

Query: 159 SSVEGLFDVIVSN 171
            +  G  D+I++N
Sbjct: 235 KAFTGKADLIIAN 247


>gi|189466913|ref|ZP_03015698.1| hypothetical protein BACINT_03295 [Bacteroides intestinalis DSM
           17393]
 gi|212694247|ref|ZP_03302375.1| hypothetical protein BACDOR_03773 [Bacteroides dorei DSM 17855]
 gi|255690867|ref|ZP_05414542.1| methyltransferase, UbiE/COQ5 family [Bacteroides finegoldii DSM
           17565]
 gi|189435177|gb|EDV04162.1| hypothetical protein BACINT_03295 [Bacteroides intestinalis DSM
           17393]
 gi|212662748|gb|EEB23322.1| hypothetical protein BACDOR_03773 [Bacteroides dorei DSM 17855]
 gi|260623501|gb|EEX46372.1| methyltransferase, UbiE/COQ5 family [Bacteroides finegoldii DSM
           17565]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|84393814|ref|ZP_00992560.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01]
 gi|84375554|gb|EAP92455.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01]
          Length = 340

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106
           W   Y V +   S T +  P           ++LL+D+     LP+++ +    +LD G 
Sbjct: 159 WFKTYTVNIDEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G +   +    P  +    DIS  A+  +++    NG++   +   SD +S     + 
Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267

Query: 167 VIVSNPPY 174
            I+SNPP+
Sbjct: 268 FIISNPPF 275


>gi|329889421|ref|ZP_08267764.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844722|gb|EGF94286.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC
           11568]
          Length = 242

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E R   R+++ G G GAV + +    P     G++    A  +A+ NA  N    R   
Sbjct: 33  VEARPGERLIEAGCGAGAVLMQIAARRPGVLLTGLERDAAAAALARQNAELNNAEARTTI 92

Query: 153 LQSDWFSSVEGL----FDVIVSNPPYIE 176
           ++ D       L    FD  VSNPP+ +
Sbjct: 93  VEGDVARGFRALDLSPFDWAVSNPPFFD 120


>gi|310818989|ref|YP_003951347.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392061|gb|ADO69520.1| Ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 288

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGTG + +A  K     + VG D    ++E+A  NA  N   +    L       
Sbjct: 160 VLDVGTGTGVLAIAAKKLG-AGRVVGTDNDPTSVELAHENAAVNDTPDV--ELSGKGLEQ 216

Query: 161 VEGLFDVIVSN 171
           V G FD++V+N
Sbjct: 217 VPGTFDLVVAN 227


>gi|257482047|ref|ZP_05636088.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 308

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++   
Sbjct: 152 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 211

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 212 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 254


>gi|71904274|ref|YP_281077.1| type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS6180]
 gi|306826650|ref|ZP_07459954.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus pyogenes ATCC 10782]
 gi|71803369|gb|AAX72722.1| type I restriction-modification system methylation subunit
           [Streptococcus pyogenes MGAS6180]
 gi|304431177|gb|EFM34182.1| type I restriction-modification system DNA-methyltransferase
           [Streptococcus pyogenes ATCC 10782]
          Length = 526

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGVS--- 147
           E +  + + D   G+G++ L   K   +S      G +I+     +A+ N + +GV+   
Sbjct: 215 EDQKGMTLYDPAMGSGSLLLNAKKYSNQSDTVSYYGQEINTSTYNLARMNMMLHGVAIEN 274

Query: 148 ---ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                 DTL +DW +     FD ++ NPPY
Sbjct: 275 QHLSNADTLDADWPTDEPTNFDGVLMNPPY 304


>gi|23499967|ref|NP_699407.1| hypothetical protein BRA0207 [Brucella suis 1330]
 gi|62317154|ref|YP_223007.1| hypothetical protein BruAb2_0202 [Brucella abortus bv. 1 str.
           9-941]
 gi|83269137|ref|YP_418428.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar
           Abortus 2308]
 gi|148558154|ref|YP_001257254.1| hypothetical protein BOV_A0186 [Brucella ovis ATCC 25840]
 gi|161620285|ref|YP_001594171.1| methyltransferase [Brucella canis ATCC 23365]
 gi|189022413|ref|YP_001932154.1| conserved hypothetical protein TIGR00095 [Brucella abortus S19]
 gi|254691363|ref|ZP_05154617.1| methyltransferase [Brucella abortus bv. 6 str. 870]
 gi|254698433|ref|ZP_05160261.1| methyltransferase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254702621|ref|ZP_05164449.1| methyltransferase [Brucella suis bv. 3 str. 686]
 gi|254706248|ref|ZP_05168076.1| methyltransferase [Brucella pinnipedialis M163/99/10]
 gi|254711458|ref|ZP_05173269.1| methyltransferase [Brucella pinnipedialis B2/94]
 gi|254712061|ref|ZP_05173872.1| methyltransferase [Brucella ceti M644/93/1]
 gi|254715131|ref|ZP_05176942.1| methyltransferase [Brucella ceti M13/05/1]
 gi|254731880|ref|ZP_05190458.1| methyltransferase [Brucella abortus bv. 4 str. 292]
 gi|256014992|ref|YP_003105001.1| methyltransferase [Brucella microti CCM 4915]
 gi|256029911|ref|ZP_05443525.1| methyltransferase [Brucella pinnipedialis M292/94/1]
 gi|256059560|ref|ZP_05449759.1| methyltransferase [Brucella neotomae 5K33]
 gi|256158080|ref|ZP_05455998.1| methyltransferase [Brucella ceti M490/95/1]
 gi|256252965|ref|ZP_05458501.1| methyltransferase [Brucella ceti B1/94]
 gi|256256548|ref|ZP_05462084.1| methyltransferase [Brucella abortus bv. 9 str. C68]
 gi|260166987|ref|ZP_05753798.1| methyltransferase [Brucella sp. F5/99]
 gi|260568471|ref|ZP_05838940.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260756975|ref|ZP_05869323.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260762894|ref|ZP_05875226.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882786|ref|ZP_05894400.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261220058|ref|ZP_05934339.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261313692|ref|ZP_05952889.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261323528|ref|ZP_05962725.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|265986929|ref|ZP_06099486.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|265996595|ref|ZP_06109152.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|23463548|gb|AAN33412.1| conserved hypothetical protein TIGR00095 [Brucella suis 1330]
 gi|62197347|gb|AAX75646.1| conserved hypothetical protein TIGR00095 [Brucella abortus bv. 1
           str. 9-941]
 gi|82939411|emb|CAJ12365.1| N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA
           methyltransferase, N12 class:Conserved hypothetical
           protein 95 [Brucella melitensis biovar Abortus 2308]
 gi|148369439|gb|ABQ62311.1| conserved hypothetical protein TIGR00095 [Brucella ovis ATCC 25840]
 gi|161337096|gb|ABX63400.1| methyltransferase [Brucella canis ATCC 23365]
 gi|189020987|gb|ACD73708.1| conserved hypothetical protein TIGR00095 [Brucella abortus S19]
 gi|255997652|gb|ACU49339.1| methyltransferase [Brucella microti CCM 4915]
 gi|260155136|gb|EEW90217.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260673315|gb|EEX60136.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677083|gb|EEX63904.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872314|gb|EEX79383.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260918642|gb|EEX85295.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|261299508|gb|EEY03005.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|261302718|gb|EEY06215.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262550892|gb|EEZ07053.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|264659126|gb|EEZ29387.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 187

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S +   I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|330873247|gb|EGH07396.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 332

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|260774377|ref|ZP_05883291.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP
           69.14]
 gi|260610504|gb|EEX35709.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP
           69.14]
          Length = 295

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A +K     K +G+DI  +AL+ ++ NA  NGV+++ +       + 
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALQASRDNAERNGVADKIEVYLPQ--NQ 219

Query: 161 VEGLF-DVIVSN 171
            E L  DV+V+N
Sbjct: 220 PENLVADVLVAN 231


>gi|238924708|ref|YP_002938224.1| hypothetical protein EUBREC_2357 [Eubacterium rectale ATCC 33656]
 gi|238876383|gb|ACR76090.1| hypothetical protein EUBREC_2357 [Eubacterium rectale ATCC 33656]
          Length = 240

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GT  G V +AL++ +   K + VDI+   LE A  +   NG++E+  T  S+   +
Sbjct: 14  LCDVGTDHGYVPIALVQSNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73

Query: 161 V-EGLFDVIV 169
           + +G  D IV
Sbjct: 74  IHDGEVDSIV 83


>gi|213691917|ref|YP_002322503.1| Methylase of polypeptide chain release factors-like protein
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523378|gb|ACJ52125.1| Methylase of polypeptide chain release factors-like protein
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320458019|dbj|BAJ68640.1| hypothetical protein BLIJ_1052 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 378

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           ALA  L     R+   +LD   G G     LL  S       V+++  A E++  NA  N
Sbjct: 133 ALACRLGTAPSRN--NVLDYCAGPGIQ--GLLSASHGAHVTAVEVNPLASELSLCNARLN 188

Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            +   F+ +      S   L    FD I +NPP         L +      P +  DGG 
Sbjct: 189 KLDNLFNVINKSVIESETDLKNLRFDFICANPP--------LLPIPFNLNYPFVG-DGGT 239

Query: 201 DGLSHYRTIADGVSRHLNKDG 221
           DGLS +R I +    HL+++G
Sbjct: 240 DGLSIFRQIMNYGIPHLSRNG 260


>gi|54023589|ref|YP_117831.1| putative DNA metyltransferase [Nocardia farcinica IFM 10152]
 gi|54015097|dbj|BAD56467.1| putative DNA methyltransferase [Nocardia farcinica IFM 10152]
          Length = 558

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 16/134 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD   G G + LAL  E+   +  GV I     ++ +S             + +DW +
Sbjct: 44  RVLDPACGEGELLLALHGEAARVR-PGVPIRMTGYDLDESALARARARAAAAGMVADWHT 102

Query: 160 S---------VEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                       G FD I++NPPY  ++ +  D   L  R+F     L G ID    + T
Sbjct: 103 GDFLSEAARLGPGRFDAIITNPPYVRVQHLGADTARLLSREF----GLHGRIDLTHPFVT 158

Query: 209 IADGVSRHLNKDGL 222
           +A  + R     GL
Sbjct: 159 VAPRLLRPAGVLGL 172


>gi|331090275|ref|ZP_08339162.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|330401894|gb|EGG81469.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 459

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DL +GTG +   L   +P  K V GV+I  +A+E AK NA  NG+S   + +  D F 
Sbjct: 317 VFDLFSGTGTISQVL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372

Query: 160 SVEGLF---DVIVSNPP 173
            ++ +    DVI+ +PP
Sbjct: 373 VLDDIKEKPDVIILDPP 389


>gi|300869811|ref|YP_003784682.1| type-I restriction-modification system HsdM [Brachyspira pilosicoli
           95/1000]
 gi|300687510|gb|ADK30181.1| type-I restriction-modification system, HsdM [Brachyspira
           pilosicoli 95/1000]
          Length = 529

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 15/112 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA----LLKESPFFKGVGV 127
           F P+  +ELL    +        K ++ R+ D   G+G++ L     L  E       G 
Sbjct: 214 FTPQEVSELLTKITIT------GKSEIKRVYDPACGSGSLLLKFKRILKDEEKKIHYFGQ 267

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
           +I+     + + N   + +  E+FD    D  +  + L    FD IVSNPPY
Sbjct: 268 EINITTYNLCRINMFLHDIGFEKFDIAHGDTLTEPKHLSDEPFDAIVSNPPY 319


>gi|300812615|ref|ZP_07093028.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300496396|gb|EFK31505.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 314

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 27/138 (19%)

Query: 57  WRDFYNVRLTLS---------SDTFEPRPETELL-VDSALAF----------SLPRIEKR 96
           W+ +Y+V + LS          D   P  + E++ +D  LAF          ++  IE+ 
Sbjct: 115 WQKYYHV-INLSRHLAIVPEWEDYQPPFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERA 173

Query: 97  DV--VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153
            V  + + D+GTG+G + +A  K     K V   DIS +++  A+ NA  NG+ +     
Sbjct: 174 MVKPLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIHD-IALQ 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
           ++   + V+G FD+IV+N
Sbjct: 231 KTSLLADVDGKFDLIVAN 248


>gi|149918556|ref|ZP_01907045.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
           SIR-1]
 gi|149820632|gb|EDM80044.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
           SIR-1]
          Length = 342

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 23/93 (24%)

Query: 76  PETELLVDSALAF-------------------SLPRIEKRDVVRILDLGTGTGAVCLALL 116
           PE EL++D   AF                   ++P  + R   R+LDLG G+G + L+ L
Sbjct: 153 PEAELVLDPGRAFGTGLHESTRACLQLLVNLAAVPSWQPR---RVLDLGCGSGILGLSAL 209

Query: 117 KESPFFKGVGV-DISCKALEIAKSNAVTNGVSE 148
           +  P   G+ + D   +A++ ++ NA  NG+ E
Sbjct: 210 RLRPDLGGLQLTDHDPEAVDTSRENAALNGLGE 242


>gi|116621453|ref|YP_823609.1| SAM-dependent methyltransferase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224615|gb|ABJ83324.1| SAM-dependent methyltransferase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 387

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 17/102 (16%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LD  T TG   L L  +    + V  D S  ALE A++N+  NG+ +  D  ++D F 
Sbjct: 217 RALDCFTSTGGFALHLAPKCEHVEAV--DSSGPALEAARANSTANGI-DNIDWNEADVFD 273

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            + G       F ++V +PP              R  DP IS
Sbjct: 274 LLSGYANARRQFSMVVLDPP--------AFAKNKRSLDPAIS 307


>gi|327179732|gb|AEA30280.1| O-methyltransferase [Streptomyces sp. Acta 2897]
          Length = 342

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F   P    L D    F  P         +LD+G GTG     LL+  P ++  G++  
Sbjct: 147 NFWAPPIVAALADGFETFEWPTDRP---ASVLDIGCGTGLYSQLLLERFPKWRATGLEAP 203

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
             A  IA++ A   GV++RFD    D+++   G
Sbjct: 204 HIA-PIAEAQAQRLGVADRFDVQVRDFWTESWG 235


>gi|326664911|ref|XP_003197913.1| PREDICTED: trimethylguanosine synthase-like [Danio rerio]
          Length = 809

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  AL  +    + +G+DI    L +A+ NA   GV +R D LQ D+      L
Sbjct: 653 GVGGNAIQFALTGK----RVIGIDIDPVRLALAQHNAAVYGVEQRIDFLQGDFLQLAPHL 708

Query: 165 F-DVIVSNPPY 174
             D++  +PP+
Sbjct: 709 RGDMVFLSPPW 719


>gi|291541026|emb|CBL14137.1| Predicted N6-adenine-specific DNA methylase [Roseburia intestinalis
           XB6B4]
          Length = 498

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A+  SL +   ++  +ILD   G G + +      P  +  G+DI   A+E A+ NA  
Sbjct: 336 AAMLVSLAKPYLKENAQILDPFCGVGTMLIERDIAQPAREKYGIDIFGLAIEGARENASL 395

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173
            G  E+ + +  D+F    + LFD I++N P
Sbjct: 396 AG--EKINFIHRDYFDFKHDYLFDEIITNMP 424


>gi|257054996|ref|YP_003132828.1| putative methyltransferase [Saccharomonospora viridis DSM 43017]
 gi|256584868|gb|ACU96001.1| putative methyltransferase [Saccharomonospora viridis DSM 43017]
          Length = 189

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 14/117 (11%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPFFKGVGVDIS 130
           RP TEL V  AL  SL    + D VR+LDL +G+GA+ L  L    +E+ F     V+  
Sbjct: 22  RPTTEL-VREALFSSLEAAGELDGVRVLDLYSGSGALGLEALSRGAREAMF-----VEAD 75

Query: 131 CKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             A+E+ + N    G+    R   +++         F++++++PPY  +V  + LG+
Sbjct: 76  RTAVEVLRGNIARVGLGGVVRQGKVETVVAEPAPEPFELVLADPPY--AVDAETLGV 130


>gi|224026279|ref|ZP_03644645.1| hypothetical protein BACCOPRO_03035 [Bacteroides coprophilus DSM
           18228]
 gi|224019515|gb|EEF77513.1| hypothetical protein BACCOPRO_03035 [Bacteroides coprophilus DSM
           18228]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|254470255|ref|ZP_05083659.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062]
 gi|211960566|gb|EEA95762.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062]
          Length = 300

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 88  FSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             L R+ KR    R+LDLGTGTG + +AL K +   + +  DI   A+E A  NA  N V
Sbjct: 145 LELQRLLKRHKYHRMLDLGTGTGVLGIALAKLTG-SEVLATDIDPIAIEAAIDNARKNNV 203

Query: 147 SERFDTLQSDWFSSVE-------GLFDVIVSN 171
              F        + VE       G FD++V+N
Sbjct: 204 GPLFKAFTG---AGVEDRRFNEFGPFDLVVAN 232


>gi|71282574|ref|YP_267298.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea
           34H]
 gi|123633940|sp|Q489G6|PRMA_COLP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|71148314|gb|AAZ28787.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea
           34H]
          Length = 293

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + LA LK     K +G+DI  +AL+ + +NA  N VS+R +  L  D   
Sbjct: 163 VVDFGCGSGILSLAALKLG-AKKVIGIDIDPQALQASLANAERNNVSDRLELYLPKD--- 218

Query: 160 SVEGLFDVIVSN 171
             E   DV+V+N
Sbjct: 219 QPEFKADVVVAN 230


>gi|33151297|ref|NP_872650.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi
           35000HP]
 gi|38605187|sp|Q7VPN5|PRMA_HAEDU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|33147517|gb|AAP95039.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi
           35000HP]
          Length = 293

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + ++ LK     + +G+DI  +A+  +++NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAISALKLGAK-QAIGIDIDPQAILASQNNAAANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
           +++   DV+V+N
Sbjct: 221 ALQA--DVVVAN 230


>gi|15669845|ref|NP_248659.1| hypothetical protein MJ_1649 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3334438|sp|Q59043|Y1649_METJA RecName: Full=Putative ribosomal RNA large subunit
           methyltransferase MJ1649
 gi|1592232|gb|AAB99670.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 387

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157
           R+LD+   TG   + A ++ +     VGVD+S KAL++A+ N   N +  +R++ ++ + 
Sbjct: 216 RVLDICCYTGGFSVHAAIRGAEV---VGVDLSKKALKLAEENIELNNIPKDRYEFIEGNA 272

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  ++ +      FDV++ +PP
Sbjct: 273 FEVMKEMIEDKEKFDVVILDPP 294


>gi|116753331|ref|YP_842449.1| methyltransferase small [Methanosaeta thermophila PT]
 gi|116664782|gb|ABK13809.1| methyltransferase [Methanosaeta thermophila PT]
          Length = 209

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 23/150 (15%)

Query: 97  DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DT 152
           ++ +++DLG GTG  A+  ALL    +    GVDI  +AL IA+ NA   GV   F    
Sbjct: 45  ELSQVIDLGCGTGILAIGAALLGAMAY----GVDIDRQALRIARENAEMLGVHVDFILGD 100

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           ++   F  V+     ++ NPP+         G +      R  L   ++      TI + 
Sbjct: 101 IERIAFRRVK----TVIMNPPF---------GAQRASRGDRAFLKKAVEIADVIYTIHNA 147

Query: 213 VSRHLNKDGL--CSVEIGYNQKVDVVRIFE 240
            S +  +  +  C VE  Y  ++ + R FE
Sbjct: 148 GSLNFVRSFVSPCRVEEVYKARIPIKRTFE 177


>gi|305664504|ref|YP_003860791.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter
           sp. HTCC2170]
 gi|88708521|gb|EAR00757.1| ubiquinone/menaquinone biosynthesis methyltransferase [Maribacter
           sp. HTCC2170]
          Length = 242

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++K+  V ILD+ TGTG + + L+K       VG+DIS   LE+ K       + +  + 
Sbjct: 53  LKKKKPVNILDIATGTGDLAINLVKTGA-TNIVGLDISPGMLEVGKKKVAQKNLGQTIEM 111

Query: 153 LQSD 156
           ++ D
Sbjct: 112 VEGD 115


>gi|255009493|ref|ZP_05281619.1| putative RNA methyltransferase [Bacteroides fragilis 3_1_12]
          Length = 472

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 17/115 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALLKESPFFKGV 125
           F+  P++    +S  A++L ++  RD         + DL TGTG +   + +++   + +
Sbjct: 295 FKVGPKSFYQTNSGQAYNLYKV-ARDFAGLTGGELVYDLYTGTGTIANFVSRQAR--QVI 351

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPP 173
           G++   +A+E AK NA  NG+           D L  D+ +   G  DVI+++PP
Sbjct: 352 GIEYVPEAIEDAKVNAEINGIENTLFFAGDMKDILTQDFINQY-GRPDVIITDPP 405


>gi|163814172|ref|ZP_02205564.1| hypothetical protein COPEUT_00326 [Coprococcus eutactus ATCC 27759]
 gi|158450621|gb|EDP27616.1| hypothetical protein COPEUT_00326 [Coprococcus eutactus ATCC 27759]
          Length = 189

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D+ + RP T+ + ++      P I        LDL +G+GA+ +  L      + V 
Sbjct: 15  VTVDSMDTRPTTDRIKETLFNVLSPDIPG---CSFLDLFSGSGAIGIEALSRGAK-RAVF 70

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180
           V+   KALE    N     + +    L +D  S+V  L      FD+I  +PPY  S+  
Sbjct: 71  VENGRKALECINKNLDFTKLRDGAQVLSTDAVSAVNTLERQKDVFDIIFMDPPYGRSLER 130

Query: 181 DCL 183
           D L
Sbjct: 131 DVL 133


>gi|150020095|ref|YP_001305449.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
 gi|259534597|sp|A6LJG3|PRMA_THEM4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|149792616|gb|ABR30064.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
          Length = 258

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 12/128 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136
           T L   + LA +L +   R  + +LDLG G+G   L++L +     GV  VD    A+E 
Sbjct: 111 TGLHTTTKLAATLLKKYLRQGMDVLDLGCGSG--ILSILAKKLGASGVLAVDNDKMAVES 168

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N   N V    +   SD   +V+G +D+IVSN      +I D L   + D  P+   
Sbjct: 169 AIENVEKNNV--EVEIRVSDLLKNVDGKYDLIVSN------IIADVLVKALEDM-PKFLK 219

Query: 197 DGGIDGLS 204
             GI  LS
Sbjct: 220 KNGIVILS 227


>gi|75812663|ref|YP_320280.1| amino acid adenylation [Anabaena variabilis ATCC 29413]
 gi|75705419|gb|ABA25091.1| Amino acid adenylation [Anabaena variabilis ATCC 29413]
          Length = 2867

 Score = 37.0 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 22/145 (15%)

Query: 62   NVRLTLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            ++R  +SSDT +P PE E++   DS     L  ++ +   R+L++G GTG + L +    
Sbjct: 2069 SLRAWISSDTNQPLPEAEVIEYADSTAQRILSVMQPK---RVLEIGCGTGVILLRVAPHC 2125

Query: 120  PFFKGVGVDISCKAL------------EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
              +   G DIS  AL            +I    +  +  +  F  + ++ F ++  + + 
Sbjct: 2126 THY--CGTDISDVALRYTQQQLAIRQPDILTKVSFLHRAAHNFQDIATEQFDTI--ILNE 2181

Query: 168  IVSNPPYIESVIVDCLGLEVRDFDP 192
            +V + P IE   VD L   V+   P
Sbjct: 2182 VVQHFPSIE-YFVDVLQSAVKVVQP 2205


>gi|323143727|ref|ZP_08078395.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT
           12066]
 gi|322416440|gb|EFY07106.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT
           12066]
          Length = 293

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 13/123 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + +A LK     +  GVDI  +ALE ++ NA  NGV ++         SS
Sbjct: 161 VLDYGCGSGILAIAALKLG-AKEAYGVDIDPQALEASEENAKRNGVLDKLTLCDGKKSSS 219

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-----IADGVSR 215
                 V+   P  + +++   L  E+     +++  GG+  LS   T     I D  S+
Sbjct: 220 ------VLTPAPVTVANILCGPLA-ELEPHIAKLTAQGGMLALSGILTEQAPEIIDAYSK 272

Query: 216 HLN 218
             N
Sbjct: 273 DFN 275


>gi|300864070|ref|ZP_07108970.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300337949|emb|CBN54116.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 296

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 16/114 (14%)

Query: 76  PETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P +E +V   L      +PR       RILDLG GTG+  L L +  P  + +G+D+S  
Sbjct: 83  PPSEAIVRQGLIDAVMGVPR-------RILDLGCGTGSTTLMLKQAFPQAEVIGMDLSPY 135

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN------PPYIESVIV 180
            + +A+  A   G++ ++    ++        FD++ ++      PP +   I+
Sbjct: 136 MILVAEMKAQKAGLNIQWRHGNAEQTGFPNASFDLVTASLLFHETPPTVSQNIL 189


>gi|284048077|ref|YP_003398416.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans
           DSM 20731]
 gi|283952298|gb|ADB47101.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans
           DSM 20731]
          Length = 313

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 23/132 (17%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96
           W+ +++       + +  S +T+EP+ E +++ +D  +AF           + R+E+   
Sbjct: 115 WKQYFHTTKVGKKIVIKPSWETYEPQGEEKVIALDPGMAFGTGTHATTSMCIQRLEELVT 174

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               + D+GTG+G   LA+       K +  VDI  KA+E+A+ N   NG+S+R    Q 
Sbjct: 175 PDCEVFDVGTGSG--ILAMAAALLGAKTIHAVDIDEKAVEVARENIAQNGLSDRVTVNQG 232

Query: 156 DWFSSVEGLFDV 167
           +      G  D+
Sbjct: 233 NLLDGTPGQADL 244


>gi|163844394|ref|YP_001622049.1| methyltransferase [Brucella suis ATCC 23445]
 gi|163675117|gb|ABY39227.1| Methyltransferase [Brucella suis ATCC 23445]
          Length = 187

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S +   I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|52222860|gb|AAU34201.1| methyltransferase MppJ [Streptomyces hygroscopicus]
          Length = 337

 Score = 37.0 bits (84), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 9/127 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG+G+G   + + +  P  +G+GVDI+  A+ +A+      G  ++   ++ D    
Sbjct: 162 VADLGSGSGERLIQIARRFPGVRGLGVDIADGAIAMAEKEVAAKGFGDQISFVRGD---- 217

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                D + +   + E  ++ C  +   DF PR   +  +  L   R     V R L  D
Sbjct: 218 -ARTIDQVSARGEFAEVDLLTCF-MMGHDFWPR---ENCVQTLRKLRAAFPNVRRFLLGD 272

Query: 221 GLCSVEI 227
              +V I
Sbjct: 273 ATRTVGI 279


>gi|295398609|ref|ZP_06808640.1| O-methyltransferase [Aerococcus viridans ATCC 11563]
 gi|294973149|gb|EFG48945.1| O-methyltransferase [Aerococcus viridans ATCC 11563]
          Length = 252

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           VD+ L     ++    V +++D  +G G + L L  K S   +  G++I  +  ++AK +
Sbjct: 33  VDAILLAHFAQVSSSRVKQVIDFCSGNGVIPLLLSAKTSDKTQIHGIEIQPQVADMAKRS 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIES 177
              N ++++    Q D   SV   F     DV+  NPPY + 
Sbjct: 93  MAHNDLADKITVHQMD-LKSVRDHFKKDSVDVVTCNPPYFKK 133


>gi|289705498|ref|ZP_06501890.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289557727|gb|EFD51026.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 405

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G + +   +  P    V  D S  A+    + A  N V++R   +
Sbjct: 258 DPRPPGRVVDLGCGNGLLSVGAARLWPHVTVVATDQSAVAVASTLATARANRVADRVRAV 317

Query: 154 QSDWFSS-VEGLFDVIVSNPPYIESVIVD 181
           + D  ++  +G  + ++ NPP+ +   VD
Sbjct: 318 RDDALATWPDGTEECVLLNPPFHDGNAVD 346


>gi|283469338|emb|CAQ48549.1| methyltransferase domain family [Staphylococcus aureus subsp.
           aureus ST398]
          Length = 243

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R + ++ +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIKEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           ++  +         G FD IV 
Sbjct: 72  QYSDIYQ--LPETMGHFDAIVG 91


>gi|253581983|ref|ZP_04859207.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC
           27725]
 gi|251836332|gb|EES64869.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC
           27725]
          Length = 312

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%)

Query: 101 ILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW 157
           ++D+GTG+G + +A   L  S  +   G DI   A+E AK N   N + E +    + D 
Sbjct: 177 VIDVGTGSGILMIAADRLGASEIY---GTDIDELAVESAKENLELNKIDENKAKVFKGDL 233

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            S VE   FDV+V+N      ++ D L + + D    +  DG I
Sbjct: 234 ISVVENKKFDVVVAN------ILADVLLILLNDISKVVKKDGLI 271


>gi|254572646|ref|XP_002493432.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033231|emb|CAY71253.1| Hypothetical protein PAS_chr4_0027 [Pichia pastoris GS115]
          Length = 387

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ +++ L      PR    L     +   + + +  D   ILD+GTG   +   L   
Sbjct: 50  EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSNPP 173
              ++ +G DI  ++LE AK     N VS     L+      D F  +E   DV+++NPP
Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIENC-DVVMTNPP 168

Query: 174 Y 174
           +
Sbjct: 169 F 169


>gi|187734982|ref|YP_001877094.1| methyltransferase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425034|gb|ACD04313.1| methyltransferase [Akkermansia muciniphila ATCC BAA-835]
          Length = 191

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 19/145 (13%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +TLS    E RP T+ + ++  +   P +++ DV   LDL  G+GA  L  L        
Sbjct: 11  ITLSVPKGEVRPTTDRVREAVFSILNPLMDRADV---LDLFAGSGAFGLEALSRGARDAR 67

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGL----FDVIVSNPPYIESV 178
           + VD S  +   A++N V  G+ E    +Q D   F   E L    +D+I ++PPY    
Sbjct: 68  M-VDFSRLSCAAARANLVKTGL-EGGTVIQGDAVQFVRRELLAGRKYDIIFADPPY---- 121

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGL 203
              C G   RDF   ++ + G+ GL
Sbjct: 122 ---CKGPADRDFIVELA-EAGVAGL 142


>gi|82407927|pdb|2AVN|A Chain A, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS
           Methyltransferase-Related Protein (Tm1389) From
           Thermotoga Maritima Msb8 At 2.35 A Resolution
 gi|82407928|pdb|2AVN|B Chain B, Crystal Structure Of A UbiquinoneMENAQUINONE BIOSYNTHESIS
           Methyltransferase-Related Protein (Tm1389) From
           Thermotoga Maritima Msb8 At 2.35 A Resolution
          Length = 260

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++  W +FY+ R+  + D+    P+ +L   L+ S L   L     ++  R+LDLG GTG
Sbjct: 14  KLRSW-EFYD-RIARAYDSXYETPKWKLYHRLIGSFLEEYL-----KNPCRVLDLGGGTG 66

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--QSDWFSSVEGLFDV 167
              L L +    F+ V VD S + LE+A+   V N V  + + L   S  F +V  L DV
Sbjct: 67  KWSLFLQERG--FEVVLVDPSKEXLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDV 124

Query: 168 I 168
           +
Sbjct: 125 L 125


>gi|332532819|ref|ZP_08408692.1| putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037665|gb|EGI74116.1| putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 380

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LP   K     I+DLG G G V L  L   P      VD S  A+E A+ N   N + ++
Sbjct: 225 LPETPK--AKSIIDLGCGNGVVGLMTLARCPNASVTFVDESYMAVESARLNVEIN-LGDK 281

Query: 150 FDT---LQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           FD    +++D  +  E    D+++ NPP+ ++  V
Sbjct: 282 FDNCEFIENDCLTGFERDSVDMVLCNPPFHQAQAV 316


>gi|317480611|ref|ZP_07939699.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
 gi|316903237|gb|EFV25103.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|303248612|ref|ZP_07334867.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfovibrio fructosovorans JJ]
 gi|302489962|gb|EFL49886.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Desulfovibrio fructosovorans JJ]
          Length = 229

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +LD  TGTG V LA+ +  P  + +G+D S   L +A+      GVS
Sbjct: 47  VLDAATGTGEVALAIRRRRPGLRVLGLDFSPAMLAVAREKIRRRGVS 93


>gi|270294142|ref|ZP_06200344.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. D20]
 gi|317478899|ref|ZP_07938047.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           4_1_36]
 gi|270275609|gb|EFA21469.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp. D20]
 gi|316904933|gb|EFV26739.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides sp.
           4_1_36]
          Length = 473

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + K +   + +G++   +A+E AK NA  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSKHAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D+ +   G  DVI+++PP
Sbjct: 387 TQDFINQY-GRPDVIITDPP 405


>gi|302555308|ref|ZP_07307650.1| methyltransferase type 12 [Streptomyces viridochromogenes DSM
           40736]
 gi|302472926|gb|EFL36019.1| methyltransferase type 12 [Streptomyces viridochromogenes DSM
           40736]
          Length = 313

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+D G+G G V     +  P  + V VD S   LE A++ A   GV +RF T+  +
Sbjct: 73  IVDAGSGPGVVSCLFAETFPAARIVAVDGSAPLLERARARAERQGVGDRFSTIAGE 128


>gi|254695337|ref|ZP_05157165.1| methyltransferase [Brucella abortus bv. 3 str. Tulya]
          Length = 187

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S +   I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|268317880|ref|YP_003291599.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus
           marinus DSM 4252]
 gi|262335414|gb|ACY49211.1| ubiquinone/menaquinone biosynthesis methyltransferase [Rhodothermus
           marinus DSM 4252]
          Length = 245

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LD+ TGT  + + + +  P  + VGVDI+   L++ +      G+SER
Sbjct: 62  RVLDVATGTADLAIEVARRLPVERVVGVDIAESMLQVGRQKVDRLGLSER 111


>gi|313126501|ref|YP_004036771.1| methyltransferase [Halogeometricum borinquense DSM 11551]
 gi|312292866|gb|ADQ67326.1| methyltransferase [Halogeometricum borinquense DSM 11551]
          Length = 207

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLGTGTG + L      P  + VGVDI   AL+ A+ N +  G +     +++D   +
Sbjct: 52  VVDLGTGTGMLALGAALRGP-ARVVGVDIDADALDTARENRIRVGTTTPIHWVRADATQA 110

Query: 161 VEGLFD--VIVSNPPY 174
              + +   ++ NPP+
Sbjct: 111 PLCIDEPTTVLMNPPF 126


>gi|220930175|ref|YP_002507084.1| methyltransferase type 11 [Clostridium cellulolyticum H10]
 gi|220000503|gb|ACL77104.1| Methyltransferase type 11 [Clostridium cellulolyticum H10]
          Length = 246

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|158319773|ref|YP_001512280.1| RNA methyltransferase [Alkaliphilus oremlandii OhILAs]
 gi|158139972|gb|ABW18284.1| RNA methyltransferase, TrmA family [Alkaliphilus oremlandii OhILAs]
          Length = 450

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DL +GTG +   +   +P  K V G++I  +A+E+AK NA  NG+ +  + +  D   
Sbjct: 310 VFDLYSGTGTIAQIM---APVAKKVIGIEIVEEAVEMAKENAKMNGL-DNVEFIAGDVLE 365

Query: 160 SVEGLF---DVIVSNPP 173
           +V  L    D+IV +PP
Sbjct: 366 AVNDLKEKPDLIVIDPP 382


>gi|319406074|emb|CBI79704.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. AR 15-3]
          Length = 247

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+G G G +C  + +       +GVD +   +E+AK +A+ +G+S  + T  ++  
Sbjct: 66  LRILDIGCGGGLLCEPMARLGATV--IGVDAAQMNIEVAKIHAIQSGLSIDYRTATAEVL 123

Query: 159 SSVEGLFDVIVS 170
            +    FDVI++
Sbjct: 124 VNKGEQFDVILN 135


>gi|317501056|ref|ZP_07959262.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|316897443|gb|EFV19508.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 8_1_57FAA]
          Length = 460

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 8/77 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DL +GTG +   L   +P  K V GV+I  +A+E AK NA  NG+S   + +  D F 
Sbjct: 317 VFDLFSGTGTISQVL---APVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFE 372

Query: 160 SVEGLF---DVIVSNPP 173
            ++ +    DVI+ +PP
Sbjct: 373 VLDDIKEKPDVIILDPP 389


>gi|225867900|ref|YP_002743848.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225701176|emb|CAW98081.1| putative methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 247

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 81  LVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L D   AFSL  + K RD  ++L+L  GTG   +   +    F+  G+D+S + LE+AK 
Sbjct: 20  LYDKWTAFSLRHLPKSRDQQQLLELACGTGIQSVRFAQAG--FEVTGLDLSQEMLEVAKK 77

Query: 140 NAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-- 196
            A +   +  F  +Q +    S  G FDV+     Y +S+      +EV D    +    
Sbjct: 78  RAQSAKKAITF--VQGNMLDLSQAGSFDVVTC---YSDSICYMQDEIEVGDVFKEVYQVL 132

Query: 197 -DGGI---DGLSHYRT--IADGVSRHLNKDGLCSVEIGYN 230
            DGGI   D  S Y+   +  G S H N +    V   Y 
Sbjct: 133 NDGGIFMFDVHSIYQMDHLFPGYSYHENAEEFAMVWDTYK 172


>gi|125974059|ref|YP_001037969.1| methyltransferase type 12 [Clostridium thermocellum ATCC 27405]
 gi|256004465|ref|ZP_05429445.1| Methyltransferase type 12 [Clostridium thermocellum DSM 2360]
 gi|281418209|ref|ZP_06249229.1| Methyltransferase type 12 [Clostridium thermocellum JW20]
 gi|125714284|gb|ABN52776.1| Methyltransferase type 12 [Clostridium thermocellum ATCC 27405]
 gi|255991606|gb|EEU01708.1| Methyltransferase type 12 [Clostridium thermocellum DSM 2360]
 gi|281409611|gb|EFB39869.1| Methyltransferase type 12 [Clostridium thermocellum JW20]
 gi|316941305|gb|ADU75339.1| Methyltransferase type 12 [Clostridium thermocellum DSM 1313]
          Length = 223

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSDWF 158
           R+LDLG GTG +     KE P  + V VDI+ + LEI++   A  + +  +      D  
Sbjct: 45  RVLDLGAGTGLLTYYWYKECPSAEYVLVDIADEMLEISRKRFAGIDRIQHKILDYSKD-- 102

Query: 159 SSVEGLFDVIVS 170
              EG FD I+S
Sbjct: 103 -LPEGNFDAIIS 113


>gi|325963544|ref|YP_004241450.1| 23S rRNA m(2)G-1835 methyltransferase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469631|gb|ADX73316.1| 23S rRNA m(2)G-1835 methyltransferase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 398

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG GTG +     ++ P       D S  A+  A++ A  NG+SER   LQ D   ++
Sbjct: 252 VDLGCGTGILAAMYARQHPGSAVTATDQSAAAVASARATAGANGLSERITVLQDDALGTM 311

Query: 162 EGL-FDVIVSNPPY 174
                D+++ NPP+
Sbjct: 312 AAASADLVLLNPPF 325


>gi|298485717|ref|ZP_07003796.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159743|gb|EFI00785.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320325729|gb|EFW81790.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327352|gb|EFW83366.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330988565|gb|EGH86668.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331008904|gb|EGH88960.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 332

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|218463249|ref|ZP_03503340.1| ribosomal protein L11 methyltransferase [Rhizobium etli Kim 5]
          Length = 292

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++    T  +  F 
Sbjct: 156 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212

Query: 160 SV----EGLFDVIVSN 171
           S      G FD+I++N
Sbjct: 213 STAFSEHGPFDLIIAN 228


>gi|218710465|ref|YP_002418086.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
 gi|218323484|emb|CAV19661.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
          Length = 340

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE----------TELLVDSALAFSLPRIEKRDVVRILDLGT 106
           W   Y V +   S T +  P           ++LL+D+     LP+++ +    +LD G 
Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGQFDVGSQLLLDT-----LPKLKGK----VLDFGC 209

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G +   +    P  +    DIS  A+  +++    NG++   +   SD +S     + 
Sbjct: 210 GAGVLGAVMASRHPDIELEMCDISAFAVASSQATLEANGLTG--NVFASDVYSDTSKDYQ 267

Query: 167 VIVSNPPY 174
            I+SNPP+
Sbjct: 268 FIISNPPF 275


>gi|218246859|ref|YP_002372230.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|218167337|gb|ACK66074.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
          Length = 441

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           ILD+  G+G   L+L + +P  K +G+DIS  +LE+A++    +G
Sbjct: 62  ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHG 106


>gi|17227508|ref|NP_484056.1| hypothetical protein all0012 [Nostoc sp. PCC 7120]
 gi|17134990|dbj|BAB77536.1| all0012 [Nostoc sp. PCC 7120]
          Length = 399

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 1/86 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   R   +  +RILD G G+G     L+  +P  + VG+D+S   L +AK     
Sbjct: 41  AAHSFCTGRKPAKQDIRILDAGCGSGVGTEYLVHLNPQAQVVGIDLSAGTLAVAKVRCQR 100

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVI 168
           +G +   F  L       + G FD+I
Sbjct: 101 SGANRVEFHHLSLYDVEQLPGEFDLI 126


>gi|331229725|ref|XP_003327528.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309306518|gb|EFP83109.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 225

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 21/107 (19%)

Query: 100 RILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDW 157
           R+LDLG G G + +A  L  S +   +GVD+   AL +A++N  +  +S+   D +Q+D 
Sbjct: 54  RVLDLGCGCGILSIASTLLGSAY--TLGVDLDPDALLVARNNLASLDISDSTIDFIQADL 111

Query: 158 FSSV----------------EGLFDVIVSNPPY-IESVIVDCLGLEV 187
            SS                 E  FD +V NPP+  ++  +D + LE+
Sbjct: 112 SSSSSFRDLFGGHSRNDSEEEPFFDTVVMNPPFGTKNKGIDIVFLEI 158


>gi|291527129|emb|CBK92715.1| Predicted SAM-dependent methyltransferase [Eubacterium rectale
           M104/1]
          Length = 240

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GT  G V +AL++ +   K + VDI+   LE A  +   NG++E+  T  S+   +
Sbjct: 14  LCDVGTDHGYVPIALVQSNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73

Query: 161 V-EGLFDVIV 169
           + +G  D IV
Sbjct: 74  IHDGEVDSIV 83


>gi|302864689|ref|YP_003833326.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
 gi|302567548|gb|ADL43750.1| Methyltransferase type 12 [Micromonospora aurantiaca ATCC 27029]
          Length = 496

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G GA+  AL+ +  F + VGVD+S ++L +A      + + ER
Sbjct: 302 RVLDLGCGGGALLTALVADRRFTEVVGVDVSDRSLGLAARRLRLDRLPER 351


>gi|254699497|ref|ZP_05161325.1| methyltransferase [Brucella suis bv. 5 str. 513]
 gi|261749952|ref|ZP_05993661.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261739705|gb|EEY27631.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 187

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S +   I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTMEP- 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|190890603|ref|YP_001977145.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium etli CIAT
           652]
 gi|190695882|gb|ACE89967.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CIAT 652]
          Length = 419

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RIL++G+G G + + L + +      G+ +S + L+++++ A   G+SER      D+ +
Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRTRAEKRGLSERVRFELQDYRT 235

Query: 160 SVEGLFDVIVS 170
                FD IVS
Sbjct: 236 MTGRKFDRIVS 246


>gi|72004309|ref|XP_781570.1| PREDICTED: similar to MGC80044 protein [Strongylocentrotus
           purpuratus]
 gi|115969573|ref|XP_001176737.1| PREDICTED: similar to MGC80044 protein [Strongylocentrotus
           purpuratus]
          Length = 232

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-AKSNAVTNG 145
           A +L R+     VRILD+G GTG V   L  ++ +    GVD+S  +L++  K    +  
Sbjct: 63  ADALTRLVTNRDVRILDVGCGTGLVGQQLY-DNGYRDIHGVDMSAGSLKVLEKKQIYSKL 121

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           V  RFD   S      +G FDVI+S
Sbjct: 122 VKARFDP--STPLQYADGYFDVIIS 144


>gi|322391010|ref|ZP_08064514.1| site-specific DNA-methyltransferase [Streptococcus parasanguinis
           ATCC 903]
 gi|321142240|gb|EFX37714.1| site-specific DNA-methyltransferase [Streptococcus parasanguinis
           ATCC 903]
          Length = 385

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 13/59 (22%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NA   GVS        R   L SD    + G   VI+SNPPY E
Sbjct: 260 MGTDIDARMVEIAKENAQKAGVSSDITFKQMRVQDLHSD---KING---VIISNPPYGE 312


>gi|315608157|ref|ZP_07883149.1| 23S rRNA (uracil-5-)-methyltransferase [Prevotella buccae ATCC
           33574]
 gi|315250126|gb|EFU30123.1| 23S rRNA (uracil-5-)-methyltransferase [Prevotella buccae ATCC
           33574]
          Length = 490

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           + DL TGTG +   + +E+   + +G++   +A+E AK N+  NG+            + 
Sbjct: 347 VYDLYTGTGTIANFVAREAK--QVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 404

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F    G  DVI+++PP
Sbjct: 405 NDEFIRQHGRPDVIITDPP 423


>gi|268326452|emb|CBH40040.1| conserved hypothetical protein, SAM-dependent methyltransferase
           type 11 family [uncultured archaeon]
          Length = 247

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +LDLGTGTG +   +LK+   FK +G+D+S   L++A+  A
Sbjct: 57  VLDLGTGTGFLARIILKQG--FKVLGLDLSKNMLDVARRKA 95


>gi|254581416|ref|XP_002496693.1| ZYRO0D05940p [Zygosaccharomyces rouxii]
 gi|238939585|emb|CAR27760.1| ZYRO0D05940p [Zygosaccharomyces rouxii]
          Length = 222

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%)

Query: 72  FEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKG--- 124
           +EP  ++ LL+D      +F   R   +  + + +LG G+G V   L++   P   G   
Sbjct: 15  YEPCEDSFLLLDGLEQEQSFLQTRFRNQLAI-VCELGPGSGIVTTFLMQNDIPHGNGSIY 73

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           + +DIS  ALE  +     N    R+   +QSD    + +   D++V NPPY+ +  V  
Sbjct: 74  LALDISPWALEATQDAQRRNDCQNRYLSVIQSDLTKCLRQNSTDLLVFNPPYVPAEQVPD 133

Query: 183 LGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 +   +   ++L GG DG+   R + D +   L++ G+  +
Sbjct: 134 RPSSNENDKSQWLDLALLGGEDGMVITRQVLDQLDTILSQQGVAYI 179


>gi|227513166|ref|ZP_03943215.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227083547|gb|EEI18859.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
          Length = 250

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F         +D+ L     ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            +   V+I  K  ++A  +   N +  +   +  D  ++   +     DVIV NPPY
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127


>gi|190892563|ref|YP_001979105.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 652]
 gi|226710103|sp|B3PTU0|PRMA_RHIE6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|190697842|gb|ACE91927.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli
           CIAT 652]
          Length = 292

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++    T  +  F 
Sbjct: 156 LDLGTGSGVLAIAVRKLKNIPVL---ATDIDPIATRVAAENVRRNGIASGIVTRTAPGFH 212

Query: 160 SV----EGLFDVIVSN 171
           S      G FD+I++N
Sbjct: 213 STAFSEHGPFDLIIAN 228


>gi|189424062|ref|YP_001951239.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ]
 gi|226710087|sp|B3E5Z5|PRMA_GEOLS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189420321|gb|ACD94719.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ]
          Length = 305

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +P  E+ + ++ILDLGTG+G + +A  K     +   VDI  +A+ +A+ N   N V++R
Sbjct: 161 VPPPEQLEQIKILDLGTGSGILAIAAAKLG-ALQIDAVDIDPQAVIVAEENCALNKVADR 219

Query: 150 F 150
            
Sbjct: 220 I 220


>gi|326789431|ref|YP_004307252.1| methyltransferase type 11 [Clostridium lentocellum DSM 5427]
 gi|326540195|gb|ADZ82054.1| Methyltransferase type 11 [Clostridium lentocellum DSM 5427]
          Length = 205

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 5/56 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +LD+G GTG++   +L   P  K VGVD S + L++A+     + + +R + +Q D
Sbjct: 47  VLDVGCGTGSLLYEILDRKPQVKAVGVDFSEEMLKVAR-----DKLPKRVELIQGD 97


>gi|328850496|gb|EGF99660.1| hypothetical protein MELLADRAFT_40156 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 12/174 (6%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVG 126
           D +EP  +T +L+D AL   L  ++    +  +++G+G+G V +    +L   P    + 
Sbjct: 17  DVYEPAEDTFILLD-ALEADLDFLKALRPLICVEIGSGSGCVSVFAQKILSGIPTLH-IC 74

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
            DI+ KAL +  S    N +S   + +++   +S+  +   D+++ NPPY+E+   +   
Sbjct: 75  TDINAKALTVTNSTFQKNSLSTP-NLVRTSLLNSLRLQSSVDLLLFNPPYVETSTEEY-- 131

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVV 236
            +        S  GG +G+     + D +   L  N+  L  V I  N+  ++V
Sbjct: 132 EQATQGHIEASWAGGANGMELTNQLLDSLPSILSPNRGVLYLVAIKQNKPEEIV 185


>gi|322370432|ref|ZP_08044990.1| N-methylhydantoinase (ATP-hydrolyzing) B [Haladaptatus
           paucihalophilus DX253]
 gi|320549849|gb|EFW91505.1| N-methylhydantoinase (ATP-hydrolyzing) B [Haladaptatus
           paucihalophilus DX253]
          Length = 543

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAF 250
           S DGG DG ++Y TIA G      KDG+  V++G    ++  V   E+     V  +
Sbjct: 378 SRDGGDDGFTYYETIAGGFGGRPTKDGMDGVQVGMTNTLNTPVESLEAEYPLFVEEY 434


>gi|312867831|ref|ZP_07728036.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
 gi|311096586|gb|EFQ54825.1| conserved hypothetical protein [Streptococcus parasanguinis F0405]
          Length = 385

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 13/59 (22%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +G DI  + +EIAK NA   GVS        R   L SD    + G   VI+SNPPY E
Sbjct: 260 MGTDIDARMVEIAKENAQKAGVSSDITFKQMRVQDLHSD---KING---VIISNPPYGE 312


>gi|218509181|ref|ZP_03507059.1| ribosomal protein L11 methyltransferase [Rhizobium etli Brasil 5]
          Length = 211

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LDLGTG+G + +A+  LK  P       DI   A  +A  N   NG++    T  +  F 
Sbjct: 75  LDLGTGSGVLAIAVRKLKNIPVLA---TDIDPIATRVAAENIRRNGIASGIVTRTAPGFH 131

Query: 160 SV----EGLFDVIVSN 171
           S      G FD+I++N
Sbjct: 132 STAFSEHGPFDLIIAN 147


>gi|205374266|ref|ZP_03227065.1| hypothetical protein Bcoam_14119 [Bacillus coahuilensis m4-4]
          Length = 245

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 70/163 (42%), Gaps = 31/163 (19%)

Query: 83  DSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D  L+F+  ++E  D+    ILDL  GTG + +   KE       GVD+S   L +AK  
Sbjct: 20  DLWLSFTKSKVENGDLKGKAILDLACGTGEMSIRFAKEG--MNVTGVDLSETMLMVAKDK 77

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             TN  +   D  Q D    +EGL  FD++V        +  D L            L G
Sbjct: 78  --TNEANVSVDYYQQD-MKELEGLSEFDLVV--------LYCDSLNY----------LSG 116

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             D L+ ++ I D    HL   G+   ++    KVD + I +S
Sbjct: 117 PKDVLATFKRIYD----HLKPGGMLLFDVHSPFKVDELFIDQS 155


>gi|257059901|ref|YP_003137789.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|256590067|gb|ACV00954.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 441

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           ILD+  G+G   L+L + +P  K +G+DIS  +LE+A++    +G
Sbjct: 62  ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHG 106


>gi|146281500|ref|YP_001171653.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri A1501]
 gi|226712968|sp|A4VIL0|RSMC_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145569705|gb|ABP78811.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri A1501]
          Length = 332

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   L +  P  + V +D+   A+E ++     NG+    + +  D   
Sbjct: 194 RLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANGLEA--EVIAGDGID 251

Query: 160 SVEGLFDVIVSNPPYIESV 178
           +       I+SNPP+ + V
Sbjct: 252 AAPRQLAAIISNPPFHQGV 270


>gi|75674847|ref|YP_317268.1| hypothetical protein Nwi_0650 [Nitrobacter winogradskyi Nb-255]
 gi|74419717|gb|ABA03916.1| hypothetical protein Nwi_0650 [Nitrobacter winogradskyi Nb-255]
          Length = 272

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115
           WRD+ +   T    T   R    L +D ALA  +      D    +L++G G G  C  L
Sbjct: 10  WRDWASKFGTAIGATTRTRTAKMLEID-ALARRMSMFGLGDAPAHVLEVGCGNGLNCFGL 68

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             + P  +  G+D + + ++ A+  AV +G  +R
Sbjct: 69  AAQFPRMQLDGIDYTAEMIDAAREAAVASGFQDR 102


>gi|125974030|ref|YP_001037940.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC
           27405]
 gi|125714255|gb|ABN52747.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC
           27405]
          Length = 409

 Score = 37.0 bits (84), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A L  +       VDIS  A+++AK+NAV NG+  + D +  D F
Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKANAVRNGLDGKMDFVCEDVF 293

Query: 159 SSVEGL-------FDVIVSNPP 173
             +  L       +D I+ +PP
Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315


>gi|332289602|ref|YP_004420454.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330432498|gb|AEC17557.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 293

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGV +R    L +D  +
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAIQASRENAKRNGVEDRLQLYLSADTPN 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLKA--DVVVAN 230


>gi|261879348|ref|ZP_06005775.1| TrmA family RNA methyltransferase [Prevotella bergensis DSM 17361]
 gi|270333911|gb|EFA44697.1| TrmA family RNA methyltransferase [Prevotella bergensis DSM 17361]
          Length = 489

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           I DL TGTG +   + K++   + +G++   +A+E A+ N+  NG+            + 
Sbjct: 344 IYDLYTGTGTIANFVAKKAS--QVIGIEFVPEAIEDAQVNSRINGIENTQFFAGDMKNVL 401

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F S  G  D+I+++PP
Sbjct: 402 TDDFISEHGCPDIIITDPP 420


>gi|269118833|ref|YP_003307010.1| methyltransferase type 12 [Sebaldella termitidis ATCC 33386]
 gi|268612711|gb|ACZ07079.1| Methyltransferase type 12 [Sebaldella termitidis ATCC 33386]
          Length = 233

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 25/141 (17%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------------ 148
           +LDLG GTG   +  LK+   F  +GVDIS   LEIA+     +   E            
Sbjct: 35  VLDLGCGTGEFLVKFLKDG--FTCIGVDISEVMLEIARDKTKESSDIELYQGDIRKFRTE 92

Query: 149 --------RFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLD 197
                    FDT+   D FS +E   D    N      +I D +  E+ D  F+  + LD
Sbjct: 93  KPAEYIVCNFDTVNYFDKFSDLEDFLDCSYENLTEDGILIFDVVTEEIFDEMFENGVFLD 152

Query: 198 GGIDGLSHYRTIADGVSRHLN 218
              + L+ +R   +G +  +N
Sbjct: 153 EKENYLTIWRYDKEGENYIIN 173


>gi|227822675|ref|YP_002826647.1| transcriptional regulator, ArsR family [Sinorhizobium fredii
           NGR234]
 gi|227341676|gb|ACP25894.1| transcriptional regulator, ArsR family [Sinorhizobium fredii
           NGR234]
          Length = 339

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 2/48 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LDLGTGTG +    L E  + +G+GVD S   L +A+SN    G+++
Sbjct: 160 LLDLGTGTGRILQ--LFEGLYRRGIGVDASRDMLAVARSNLDRAGITK 205


>gi|254518706|ref|ZP_05130762.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226912455|gb|EEH97656.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 385

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIE 176
           K +G DI  + L++A+SNA   GVS+  +  + D+  FS+    +  IVSNPPY E
Sbjct: 252 KLIGYDIDGRILKVARSNAEKAGVSKYIEFQRRDFKDFSN-SNKYGFIVSNPPYGE 306


>gi|167044872|gb|ABZ09539.1| hypothetical protein ALOHA_HF4000APKG8D22ctg14g9 [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 176

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 29/135 (21%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++++ P  +T  L D        + EK +    LD+GTG+G   LA L E  F   VG D
Sbjct: 4   AESYPPSEDTFFLADYI------KNEKGEFA--LDIGTGSGY--LAALLEKSFSLVVGTD 53

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S   L+  K            D L           FD+++ N PY+++        E+ 
Sbjct: 54  LSFNVLKKQKYFTTNTVCCNGADALNQQ--------FDLVICNMPYLKTD-------EIL 98

Query: 189 DFDPRISLDGGIDGL 203
           D    IS DGG DGL
Sbjct: 99  D----ISTDGGRDGL 109


>gi|59711052|ref|YP_203828.1| S-adenosyl-L-methionine-dependent methyltransferase [Vibrio
           fischeri ES114]
 gi|75354570|sp|Q5E7Q6|TRMN6_VIBF1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|59479153|gb|AAW84940.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio fischeri ES114]
          Length = 234

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   +ILD+G GTG + L   + +       +++   A ++A+ N   +   ER   +  
Sbjct: 35  RACSQILDIGAGTGLLSLMSAQRNSDAHIDAIELMPIAADVARLNFYQSPWKERLTLIHH 94

Query: 156 DWFS-SVEGLFDVIVSNPPYIES 177
           D+ +      +D I+ NPPY  +
Sbjct: 95  DFLTYQAPHKYDAIICNPPYFNN 117


>gi|317491009|ref|ZP_07949445.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920556|gb|EFV41879.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 249

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKA 133
           R E ++  DS L  S   I   D  +ILD+GTG+G + L L + +     +  V++   A
Sbjct: 27  RCEMKVGTDSILLGSWTDISNLDG-KILDIGTGSGLLALMLAQRTTDVVQIDAVELDQNA 85

Query: 134 LEIAKSNAVTNGVSERFD----TLQSDWFSSVEGLFDVIVSNPPY 174
              A  N V +  + R      +LQ+ + +     +D+IVSNPPY
Sbjct: 86  ATQAAENFVLSPWANRMRVHTCSLQA-FAAQTSERYDLIVSNPPY 129


>gi|288925116|ref|ZP_06419052.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella buccae D17]
 gi|288338306|gb|EFC76656.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella buccae D17]
          Length = 480

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------FDTLQ 154
           + DL TGTG +   + +E+   + +G++   +A+E AK N+  NG+            + 
Sbjct: 337 VYDLYTGTGTIANFVAREAK--QVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 394

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +D F    G  DVI+++PP
Sbjct: 395 NDEFIRQHGRPDVIITDPP 413


>gi|269123365|ref|YP_003305942.1| Methyltransferase type 11 [Streptobacillus moniliformis DSM 12112]
 gi|268314691|gb|ACZ01065.1| Methyltransferase type 11 [Streptobacillus moniliformis DSM 12112]
          Length = 220

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L+++  L F L    K + +++LDLG GTG +     KE      V VDIS   +EIA+S
Sbjct: 2   LIINHGLNF-LKSFSKGNKLKVLDLGCGTGTIASMFSKEGH--DVVAVDISSDMIEIAQS 58


>gi|227499799|ref|ZP_03929894.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098]
 gi|227218103|gb|EEI83371.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098]
          Length = 233

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 67  LSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRI------LDLGTGTGAVCLALLKES 119
           +S   + PR   +++ VD + +F +  I   D  R+      LD+G G+G +   +    
Sbjct: 1   MSKLDYIPRTNIKMIHVDKSYSFGVDSIILGDFARMKSNKVALDIGAGSGVLSFLINSRY 60

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174
              K   V+I  +  ++ + N   NG+ +  + +  D    +  E   D I++NPPY
Sbjct: 61  KLEKVFAVEIQKEKAKLLEENIKLNGI-KNIELINEDLNKIIIKENSIDYIITNPPY 116


>gi|170783206|ref|YP_001711540.1| hypothetical protein CMS_2907 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157776|emb|CAQ02978.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 249

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WF 158
           +LDLG G G+  L  L+  P    VGVD S       +  A   G+S R + + +D   +
Sbjct: 39  VLDLGCGDGSWLLRALRLEPSLTAVGVDHSDAGFGRVREQAEREGLSNRLELVCADARLW 98

Query: 159 SSVEGLFDVIVS 170
           +S +G FDV++S
Sbjct: 99  TSYDG-FDVVLS 109


>gi|15669849|ref|NP_248663.1| hypothetical protein MJ_1653 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3334439|sp|Q59047|Y1653_METJA RecName: Full=Putative ribosomal RNA large subunit
           methyltransferase MJ1653
 gi|1500554|gb|AAB99674.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 385

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 11/82 (13%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157
           R+LD+   TG   + A ++ +     VGVD+S KAL++A+ N   N +  +R++ ++ + 
Sbjct: 215 RVLDICCYTGGFSVHAAIRGAEV---VGVDLSKKALKLAEENMELNNIPKDRYEFIEGNA 271

Query: 158 FSSVEGL------FDVIVSNPP 173
           F  +E        FDV++ +PP
Sbjct: 272 FKVMEEFIEDGEKFDVVILDPP 293


>gi|227824691|ref|ZP_03989523.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
           D21]
 gi|226905190|gb|EEH91108.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
           D21]
          Length = 313

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 25/137 (18%)

Query: 57  WRDFYNV-----RLTLSSD--TFEPRPETELL-VDSALAFS----------LPRIEK--R 96
           W+ +++      ++ +  D  ++ P  E +++ +D  +AF           + R+E+   
Sbjct: 115 WKQYFHTTKIGSQIVIKPDWESYTPTAEEKVIELDPGMAFGTGTHATTRMCIERLEELVT 174

Query: 97  DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             + + D+GTG+G  A+  AL+          +DI  KA+E+AK N   N +S R    +
Sbjct: 175 PNIDVYDVGTGSGILAMTAALMGARSIH---AIDIDGKAVEVAKENIAKNHLSNRITVKK 231

Query: 155 SDWFSSVEGLFDVIVSN 171
            +     +   D+IV+N
Sbjct: 232 GNLLDDADEKADLIVAN 248


>gi|157960220|ref|YP_001500254.1| ribosomal protein L11 methyltransferase [Shewanella pealeana ATCC
           700345]
 gi|189037704|sp|A8GZI2|PRMA_SHEPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157845220|gb|ABV85719.1| ribosomal protein L11 methyltransferase [Shewanella pealeana ATCC
           700345]
          Length = 293

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     +  G+DI  +A+E +K+NA  NGV ++    L  D   
Sbjct: 162 VIDFGCGSGILAVAALKLG-AERVTGIDIDYQAIEASKANAERNGVEDKLALYLPED--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L D++V+N
Sbjct: 219 PADLLADILVAN 230


>gi|172056821|ref|YP_001813281.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum
           255-15]
 gi|226710085|sp|B1YKT1|PRMA_EXIS2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|171989342|gb|ACB60264.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum
           255-15]
          Length = 315

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 25/137 (18%)

Query: 57  WRDFY-------NVRLTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96
           W+ FY       ++ +    + + P+P+ +++ +D  +AF           +  IE   +
Sbjct: 117 WKQFYKPVKISRHLTVVPMWEEYTPQPDEKIIELDPGMAFGTGTHPTTVLCIQAIENYLQ 176

Query: 97  DVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           D  R++D+GTG+G  A+  A L     F    +D+   A+  A  N   N VS++    Q
Sbjct: 177 DNDRVVDVGTGSGVLAIAAAKLGAKDVF---ALDLDEVAVRSATDNVALNKVSQQVTVRQ 233

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    ++   ++IV+N
Sbjct: 234 GDLMKELKEPVELIVAN 250


>gi|330504880|ref|YP_004381749.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
 gi|328919166|gb|AEB59997.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
          Length = 331

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  +++     ILD G G G +  AL +  P  +   +D+   ALE ++   
Sbjct: 176 LDRGSALLLEHLDELPNGHILDFGCGAGVLGAALKRRYPDSELSLLDVDAFALESSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             NG+S           S+ EGL   IVSNPP+ + V  D
Sbjct: 236 ARNGLSANL-IAGIGIESAPEGL-SAIVSNPPFHQGVHTD 273


>gi|326472306|gb|EGD96315.1| hypothetical protein TESG_03768 [Trichophyton tonsurans CBS 112818]
 gi|326480519|gb|EGE04529.1| S-adenosylmethionine-dependentmethyltransferase [Trichophyton
           equinum CBS 127.97]
          Length = 370

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 36/162 (22%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGT 106
           + +  ILG + F ++ +        PR +TE      +    +  R+     +RI+D+ T
Sbjct: 70  KPLQYILGDQPFGDLTILCKEGVLIPRQDTESYTTRIAQRLLAENRLNPTKSIRIIDVCT 129

Query: 107 GTGAVCLALLKES----PFFKGVGVDISCKALEIAKSN---AVTNGV------------- 146
           GTG + L L        P    +GVDIS  AL +AK N    + NG              
Sbjct: 130 GTGCIPLLLHSLLASSIPTISIIGVDISATALSLAKKNLEYNIRNGTLLSRARDEIHFVH 189

Query: 147 -------------SERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
                        SE    L        +GL D+++SNPPYI
Sbjct: 190 ADILDPRYLESDGSELGKMLSRSNQGHSKGL-DLLISNPPYI 230


>gi|292386151|gb|ADE22330.1| O-methyltransferase [Streptomyces galbus]
          Length = 409

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           D+G   G   LAL++  P   G  +D+   A+E A+  A   G+S+RF  +  D+F+ V
Sbjct: 249 DVGGSNGDFVLALMEADPQLSGQVLDLP-HAVEGARGEAAKRGLSDRFHAVAGDFFAEV 306


>gi|295111256|emb|CBL28006.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Synergistetes bacterium SGP1]
          Length = 217

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R LDLG G G +  AL + SP     VG DIS   LE A+  A        F     D  
Sbjct: 52  RALDLGCGPGGLSYALAETSPASASIVGADISDDQLECARRGAGAFACKVEFLKASMDEL 111

Query: 159 SSVEGLFDVIVSN------PPYIESVIV 180
              +G FD+++++      PP +    +
Sbjct: 112 PFPDGHFDLVMTSMALHETPPAVRRAAI 139


>gi|260888376|ref|ZP_05899639.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185]
 gi|330838309|ref|YP_004412889.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185]
 gi|260861912|gb|EEX76412.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185]
 gi|329746073|gb|AEB99429.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185]
          Length = 285

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 14/110 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSER----F 150
           RILD+G G+GA+ +A  K +P  + +GVD+     +  +  I + NA   GV+       
Sbjct: 120 RILDVGCGSGALTIACAKGNPACQAIGVDLWRGVYASFSQRICEENAAAEGVTNTEFRPG 179

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           D L+ D+       FD + SN  Y+   I    G  + +   R+   GG+
Sbjct: 180 DALKLDFPDES---FDAVTSN--YVYHNIPKISGQTMLEETLRVLKKGGV 224


>gi|227524381|ref|ZP_03954430.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227088612|gb|EEI23924.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 250

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F         +D+ L     ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            +   V+I  K  ++A  +   N +  +   +  D  ++   +     DVIV NPPY
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127


>gi|48477790|ref|YP_023496.1| ribosomal protein L11 methyltransferase [Picrophilus torridus DSM
           9790]
 gi|48430438|gb|AAT43303.1| ribosomal protein L11 methyltransferase [Picrophilus torridus DSM
           9790]
          Length = 204

 Score = 37.0 bits (84), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R+ DLG G G  A+  +L+      +  G DI  + +E++  N    G S RF  +    
Sbjct: 57  RVADLGCGYGVFAIGASLMGA---LESKGFDIDQEMIELSVKNNEIAGASARFFNMD--- 110

Query: 158 FSSVEGLFDVIVSNPPY 174
            S ++  FD ++ NPP+
Sbjct: 111 VSKIDETFDTVIMNPPF 127


>gi|320593845|gb|EFX06248.1| ubiE/COQ5 methyltransferase [Grosmannia clavigera kw1407]
          Length = 264

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF LP + K D   ILD+G G G++     +  P    VGVDIS + L  A   A   G+
Sbjct: 10  AFLLPHLRKTD--HILDVGCGPGSITAGFAQYVPEGTVVGVDISAEVLARATQRAAELGL 67

Query: 147 S 147
           +
Sbjct: 68  A 68


>gi|332162700|ref|YP_004299277.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606805|emb|CBY28303.1| putative O-methyltransferase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666930|gb|ADZ43574.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860493|emb|CBX70797.1| uncharacterized protein yfiC [Yersinia enterocolitica W22703]
          Length = 248

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LD+G G+G + L + + S P     GV++  +A + A SNA  +  +ER    Q D  
Sbjct: 50  KVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERVHIYQQDVH 109

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    + 
Sbjct: 110 QFAENHLHQYDLIVSNPPYFAPAVA 134


>gi|290958521|ref|YP_003489703.1| ribonucleotide methyltransferase [Streptomyces scabiei 87.22]
 gi|260648047|emb|CBG71155.1| putative ribonucleotide methyltransferase [Streptomyces scabiei
           87.22]
          Length = 510

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 16/125 (12%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +AL I       +GV    D  Q   F  V
Sbjct: 172 LDLGTGSGIQALHATRHA--TRVTATDLNPRALHITALTLALSGVPA-ADLRQGSLFEPV 228

Query: 162 EG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                +D++VSNPP+   VI     L  R        DGG+ G    RT+       LN+
Sbjct: 229 RADERYDLVVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVAQSGERLNE 277

Query: 220 DGLCS 224
            G   
Sbjct: 278 GGFAQ 282


>gi|160889893|ref|ZP_02070896.1| hypothetical protein BACUNI_02324 [Bacteroides uniformis ATCC 8492]
 gi|156860885|gb|EDO54316.1| hypothetical protein BACUNI_02324 [Bacteroides uniformis ATCC 8492]
          Length = 473

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + K +   + +G++   +A+E AK NA  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSKHAR--QVIGIEYVPEAIEDAKVNAEINGIKNTLFFAGDMKDML 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D+ +   G  DVI+++PP
Sbjct: 387 TQDFINQY-GRPDVIITDPP 405


>gi|110668385|ref|YP_658196.1| fumarate hydratase [Haloquadratum walsbyi DSM 16790]
 gi|109626132|emb|CAJ52586.1| fumarate hydratase [Haloquadratum walsbyi DSM 16790]
          Length = 484

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+   A+ IA   AVT  +    DTL+S+  S  E   DVI +   +++      LG E 
Sbjct: 142 DVIPTAMHIAADEAVTKDLLPALDTLESELASQAEAFDDVIKTGRTHLQDATPISLGQEF 201

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  +I       G+S   T+ D    HL++  L    +G
Sbjct: 202 DGYKTQIQ-----KGISRVETVTD----HLSELALGGTAVG 233


>gi|332686355|ref|YP_004456129.1| putative O-methyltransferase [Melissococcus plutonius ATCC 35311]
 gi|332370364|dbj|BAK21320.1| predicted O-methyltransferase [Melissococcus plutonius ATCC 35311]
          Length = 243

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 23/173 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKS 139
           +D+ L  + PR+ K+   RI+DL  G GAV L + K++  P    + +++  +  ++ K 
Sbjct: 29  LDAVLLANFPRLPKKG--RIVDLCAGNGAVGLFISKKTKAPI---IQIELQSRLADMGKR 83

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +   N + ++      D  ++   +     D++V NPPY +   +          +P I 
Sbjct: 84  SIQLNHLEQQLTMHTLDLKNATSVIKKDSVDLVVCNPPYFKEQTMS-------QKNPNIH 136

Query: 196 LDGGIDGLSHYRTIADGV---SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L   I     Y T+ + +   S+ L  +G  ++    N+ +D++ IFE   + 
Sbjct: 137 L--AIARHEIYTTLEEVIHVSSQLLKTNGRLAMVHRPNRFLDLLNIFEKENII 187


>gi|288555661|ref|YP_003427596.1| hypothetical protein BpOF4_13265 [Bacillus pseudofirmus OF4]
 gi|288546821|gb|ADC50704.1| hypothetical protein BpOF4_13265 [Bacillus pseudofirmus OF4]
          Length = 250

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++ILD+G GTG + L++L E       GVD+S + L +A+   +  GVS
Sbjct: 38  IQILDVGCGTGELLLSMLDEGA--DVTGVDLSSEMLVVARDKCMKKGVS 84


>gi|116751314|ref|YP_848001.1| 50S ribosomal protein L11 methyltransferase [Syntrophobacter
           fumaroxidans MPOB]
 gi|166223498|sp|A0LQ64|PRMA_SYNFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116700378|gb|ABK19566.1| LSU ribosomal protein L11P methyltransferase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 290

 Score = 37.0 bits (84), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G  AV  ALL   P      VD   +A+E+A  N   NG+    + L     
Sbjct: 158 LLDVGTGSGILAVAAALLGFHPV---QAVDDDPEAVEVAAENIALNGMESAIELLAGT-A 213

Query: 159 SSVEGLFDVIVSN 171
               G FDV+++N
Sbjct: 214 RQASGAFDVVIAN 226


>gi|309379478|emb|CBX21844.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 295

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW 157
           +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F   + L S  
Sbjct: 167 VLDYGCGSGILTIAALKLGAGST-VGVDIDEQAVRAGRDNAAQNNVDAQFYLPEQLPS-- 223

Query: 158 FSSVEGLFDVIVSN 171
                G FDV+V+N
Sbjct: 224 -----GQFDVVVAN 232


>gi|293391551|ref|ZP_06635885.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952085|gb|EFE02204.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 294

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216


>gi|262198876|ref|YP_003270085.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haliangium
           ochraceum DSM 14365]
 gi|262082223|gb|ACY18192.1| ubiquinone/menaquinone biosynthesis methyltransferase [Haliangium
           ochraceum DSM 14365]
          Length = 269

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 81  LVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           L++  ++F + R  +R  V         R+LDL TGT  V +++ +  P  + VGVD S 
Sbjct: 42  LLNRVMSFGMDRRWRRKTVEALELGPGARVLDLATGTADVAMSIARSHPECEVVGVDPSA 101

Query: 132 KALEIAKSNAVTNGVSER 149
             L+I +    +  + +R
Sbjct: 102 GMLDIGREKIASEQLEDR 119


>gi|256004628|ref|ZP_05429605.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|255991363|gb|EEU01468.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|316941278|gb|ADU75312.1| SAM-dependent methyltransferase [Clostridium thermocellum DSM 1313]
          Length = 409

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A L  +       VDIS  A+++AK+NAV NG+  + D +  D F
Sbjct: 236 RVLDCFTHTGSFGLNAALGGAEHV--TCVDISQSAIDMAKANAVRNGLDGKMDFVCEDVF 293

Query: 159 SSVEGL-------FDVIVSNPP 173
             +  L       +D I+ +PP
Sbjct: 294 DLLTKLAEQKCHDYDYIILDPP 315


>gi|209694152|ref|YP_002262080.1| hypothetical protein VSAL_I0559 [Aliivibrio salmonicida LFI1238]
 gi|262827863|sp|B6EMW5|TRMN6_ALISL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|208008103|emb|CAQ78244.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 234

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D  L  +   IE+     ILD+G GTG + L   + +       V++   A E+A  N 
Sbjct: 23  TDGVLLGAWANIEQSK--NILDIGCGTGLLSLMSAQRNENSHVDAVELMPLAAEVALQNF 80

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           V +    R   +  D        L+D I+ NPPY  +
Sbjct: 81  VQSPWKNRLHLIHQDILHYHPAHLYDAIICNPPYFNN 117


>gi|153955234|ref|YP_001395999.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219855660|ref|YP_002472782.1| hypothetical protein CKR_2317 [Clostridium kluyveri NBRC 12016]
 gi|146348092|gb|EDK34628.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219569384|dbj|BAH07368.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 246

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G G  C+  + E      VGVDIS K LE+AK       V  +   ++   F 
Sbjct: 45  RVLDLGCGYGWHCIYAM-EHGASSVVGVDISHKMLEVAKEKTHFPQVEYKCCAIEDVEFP 103

Query: 160 SVEGLFDVIVSN 171
             E  FDVI+S+
Sbjct: 104 --EESFDVILSS 113


>gi|308813696|ref|XP_003084154.1| predicted serine-pyruvate aminotransferase (ISS) [Ostreococcus
           tauri]
 gi|116056037|emb|CAL58570.1| predicted serine-pyruvate aminotransferase (ISS) [Ostreococcus
           tauri]
          Length = 868

 Score = 36.6 bits (83), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--------SSVEGLFDVIVSNPP 173
            VD S  AL +A  NA  NGV+++ + +++D F        S   G +DV++ +PP
Sbjct: 718 AVDSSESALAVAAQNAELNGVADKIEFVRADAFDFMQDALDSGAAGSYDVVILDPP 773


>gi|319404565|emb|CBI78171.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella rochalimae
           ATCC BAA-1498]
          Length = 247

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+G G G +C  + +       +G D +   +E+AK +A+ +G+S  + T  ++  
Sbjct: 66  LKILDIGCGGGLLCEPMARLGATV--IGADAAQTNIEVAKIHAIQSGLSINYRTTTAEAL 123

Query: 159 SSVEGLFDVIVSNPPYIESVI 179
           ++    FDVI+ N   +E V+
Sbjct: 124 ANEGEQFDVIL-NMEVVEHVV 143


>gi|121535706|ref|ZP_01667510.1| protein of unknown function Met10 [Thermosinus carboxydivorans
           Nor1]
 gi|121305737|gb|EAX46675.1| protein of unknown function Met10 [Thermosinus carboxydivorans
           Nor1]
          Length = 393

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
            +DIS  A+E+A+ NA  NGV++R     ++ F ++  L      FD+++ +PP
Sbjct: 246 AIDISEMAIELARKNAALNGVADRCSFEVANAFDALRELSDERRQFDIVILDPP 299


>gi|222055152|ref|YP_002537514.1| methyltransferase type 11 [Geobacter sp. FRC-32]
 gi|221564441|gb|ACM20413.1| Methyltransferase type 11 [Geobacter sp. FRC-32]
          Length = 275

 Score = 36.6 bits (83), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + + ILD+ TGTG + L L +  P  +  GVD S   L  A+  A T
Sbjct: 48  EAIHILDVATGTGNMALTLARRMPRARITGVDFSAAMLAQAREKAQT 94


>gi|323137210|ref|ZP_08072289.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
 gi|322397568|gb|EFY00091.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
          Length = 242

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            ++G GTG   LALL      K + VD + + LE A+ N      + R +  ++D  S++
Sbjct: 52  FEIGCGTGVCTLALLAGRDDLKLIAVDSAARMLEQARENLAGYVAAGRVEFKEADALSAL 111

Query: 162 EGL----FDVIVSN 171
           + L     DV+ SN
Sbjct: 112 QALPDASVDVVASN 125


>gi|306821075|ref|ZP_07454693.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550911|gb|EFM38884.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 319

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 21/135 (15%)

Query: 57  WRDFYNVR-------LTLSSDTFEPRPETELL-VDSALAFS----------LPRIEK--R 96
           W+ ++NV+       +  S + + P+   +++ +D  +AF           +  IEK  +
Sbjct: 120 WKKYFNVQKVSNSIVIKPSWEEYTPKAGEKIIDIDPGMAFGTGTHETTRMCINAIEKYMK 179

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D+G G+G + +A        K V VD+   A++++K N   NG S   D    D
Sbjct: 180 KGDSLIDIGCGSGILSIAAAHLGAQ-KVVAVDLDRLAVKVSKENVELNGFSNTIDVRYGD 238

Query: 157 WFSSVEGLFDVIVSN 171
               ++   DVIV+N
Sbjct: 239 LTDVIDEKADVIVAN 253


>gi|256394948|ref|YP_003116512.1| methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
 gi|256361174|gb|ACU74671.1| Methyltransferase type 11 [Catenulispora acidiphila DSM 44928]
          Length = 258

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           I+D+G GTG+   AL +     + + +D S   L+  +S A + GV+ R  T+Q+D
Sbjct: 34  IVDIGAGTGSGTFALARRFEAAEVIAIDQSPTMLDRLQSAAASRGVAGRLRTVQAD 89


>gi|227510237|ref|ZP_03940286.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189889|gb|EEI69956.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 250

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F         +D+ L     ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFS------FSLDAVLLAEFAQVGSKRVKNIIDLCSGNGAVGLFLSSETS- 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            +   V+I  K  ++A  +   N +  +   +  D  ++   +     DVIV NPPY
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPY 127


>gi|311745306|ref|ZP_07719091.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
 gi|126577839|gb|EAZ82059.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
          Length = 319

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---- 144
            LP  EK   V +LDLGTG   +   L      +  VG +I  KA+  A+ N  +N    
Sbjct: 106 KLPEGEK---VNVLDLGTGANCIYPLLGTRIYNWNFVGSEIDPKAIHSAQQNLNSNPQIL 162

Query: 145 -GVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
             V+ R      +  S +   + +FD+++ NPP+ ES
Sbjct: 163 KKVNLRLQENPKEILSGIIRSDDVFDLVLCNPPFHES 199


>gi|16329773|ref|NP_440501.1| hypothetical protein slr1039 [Synechocystis sp. PCC 6803]
 gi|1652258|dbj|BAA17181.1| slr1039 [Synechocystis sp. PCC 6803]
          Length = 233

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWF 158
           +LD GTGT  + + L +  P ++   +D +   L IAK N +  G   +   + + +   
Sbjct: 46  VLDAGTGTARIPILLAQLRPAWQITAIDFARSMLAIAKENVIAAGCETQICLEFVDAKQL 105

Query: 159 SSVEGLFDVIVSN 171
               G FD +++N
Sbjct: 106 PYANGSFDGVIAN 118


>gi|319407558|emb|CBI81208.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella sp. 1-1C]
          Length = 247

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+G G G +C  + +       +G D +   +E+AK +A+ +G+S  + T  ++  
Sbjct: 66  LKILDIGCGGGLLCEPMARLGATV--IGADAAQTNIEVAKIHAIQSGLSINYRTTTAEAL 123

Query: 159 SSVEGLFDVIVSNPPYIESVI 179
           ++    FDVI+ N   +E V+
Sbjct: 124 ANEGEQFDVIL-NMEVVEHVV 143


>gi|300173616|ref|YP_003772782.1| methyltransferase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887995|emb|CBL91963.1| Methyltransferase [Leuconostoc gasicomitatum LMG 18811]
          Length = 185

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 18/115 (15%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----VDIS 130
           RP T+ + ++  +  +P ++  +V   LDL  GTG + +  +      +G+G    VD  
Sbjct: 22  RPTTDKVKEAMFSMLMPYLDGEEV---LDLYAGTGGLGIEAVS-----RGMGHATLVDRQ 73

Query: 131 CKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSNPPYIESVI 179
            +A+++ ++N       E F  L+         FS  +  FD+I  +PPY +  +
Sbjct: 74  VQAIQVIQNNIEKTHDKEAFTVLKMPSQQALQKFSEEKTQFDLIFLDPPYAKETL 128


>gi|261868733|ref|YP_003256655.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414065|gb|ACX83436.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 294

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216


>gi|156379240|ref|XP_001631366.1| predicted protein [Nematostella vectensis]
 gi|156218405|gb|EDO39303.1| predicted protein [Nematostella vectensis]
          Length = 213

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G  A+  A   E    + + +DI    ++ A+ NA   GV++R + +  D+   V  L
Sbjct: 62  GVGGNAIQFAFTCE----RVIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQIVPQL 117

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-------IADGVSRH 216
             DVI  +PP+       C   +V D    ISL    DG   Y T       IA  + R+
Sbjct: 118 KADVIFLSPPWGGPGYA-C--ADVFDIQTMISL----DGFELYETAKRVTPNIAYFMPRN 170

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +N + L S+  G   KV++ + F ++KL  V A+  YG
Sbjct: 171 VNMEQLTSL-AGPAGKVEIEQNFVNKKLKTVTAY--YG 205


>gi|123441354|ref|YP_001005341.1| hypothetical protein YE1008 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|262828849|sp|A1JKJ4|TRMN6_YERE8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|122088315|emb|CAL11106.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 251

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)

Query: 100 RILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++LD+G G+G + L + + S P     GV++  +A + A SNA  +  +ER    Q D  
Sbjct: 53  KVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERVHIYQQDVH 112

Query: 159 SSVEG---LFDVIVSNPPYIESVIV 180
              E     +D+IVSNPPY    + 
Sbjct: 113 QFAENHLHQYDLIVSNPPYFAPAVA 137


>gi|51246119|ref|YP_066003.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54]
 gi|50877156|emb|CAG36996.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54]
          Length = 265

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 14/103 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC-----KALEI 136
           +D+ LA     +  R   RI+DLG+G+G + L +      ++ +GV I+        + +
Sbjct: 40  LDAVLAAHF--LPPRKQARIIDLGSGSGIIALIMAYR---WRNLGVHITGFERQQSLISL 94

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
           AK N   NG  E     + D    ++ L    F+ +VSNPP+ 
Sbjct: 95  AKGNIELNGYDEICTIKEGDVRHILQHLPPESFEQLVSNPPFF 137


>gi|17231019|ref|NP_487567.1| hypothetical protein alr3527 [Nostoc sp. PCC 7120]
 gi|17132660|dbj|BAB75226.1| alr3527 [Nostoc sp. PCC 7120]
          Length = 299

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 35  RFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           RF  T+ I+ S    ++ H I G     +  +T    T    P  E LV  AL   + ++
Sbjct: 41  RFRRTDVIIPSYYTSQNFHGIEGGYLNSSAAVTYDPITEYVLPPNETLVRQALIDGV-KV 99

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + R   RILDLG GTG+  L L +  P    +G+D+S   L  A+  A T
Sbjct: 100 QPR---RILDLGCGTGSTTLMLKQAFPQADVIGLDLSPYMLVRAEDKART 146


>gi|328354743|emb|CCA41140.1| ribosomal RNA large subunit methyltransferase F [Pichia pastoris
           CBS 7435]
          Length = 333

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ +++ L      PR    L     +   + + +  D   ILD+GTG   +   L   
Sbjct: 50  EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSNPP 173
              ++ +G DI  ++LE AK     N VS     L+      D F  +E   DV+++NPP
Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIENC-DVVMTNPP 168

Query: 174 Y 174
           +
Sbjct: 169 F 169


>gi|225868982|ref|YP_002744930.1| methylase [Streptococcus equi subsp. zooepidemicus]
 gi|225702258|emb|CAX00017.1| putative methylase [Streptococcus equi subsp. zooepidemicus]
          Length = 179

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G + +  +      + V V+   KA  I ++N      S++F  L+ D   
Sbjct: 44  RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAER 102

Query: 160 SVE---GLFDVIVSNPPYIESVIV 180
           +++   G FDV+  +PPY +  IV
Sbjct: 103 ALDHLSGQFDVVFLDPPYAKETIV 126


>gi|138896092|ref|YP_001126545.1| hypothetical protein GTNG_2455 [Geobacillus thermodenitrificans
           NG80-2]
 gi|134267605|gb|ABO67800.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
          Length = 247

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 39/179 (21%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +  R  +R   +++D+G GTG + + L K    ++  GVD+S   L IA+  A   G+  
Sbjct: 29  AFDRYAQRPGRQVIDIGCGTGELAIRLAKAG--WQVSGVDVSEHMLVIAQEKAEAAGIHV 86

Query: 149 RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            F   +  + D FS ++G F            +  D L     + D +            
Sbjct: 87  PFFEQNMAELDGFSDLDGAF------------IFCDALNYLTDEDDVK------------ 122

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            RT +  V R L  DGL   ++    K+DV        LF    F D+G +   +  C 
Sbjct: 123 -RTFS-AVYRALGADGLLLFDVHSVYKMDV--------LFRDAVFADHGEDISYIWICH 171


>gi|119775680|ref|YP_928420.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis
           SB2B]
 gi|229470399|sp|A1S8P4|RLMG_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|119768180|gb|ABM00751.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B]
          Length = 383

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           ++DLG G G + L   +  P  +   VD S  A+E A+ N   N + E R + +  D  S
Sbjct: 242 VIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQNWALNALDEGRAEFIWDDCLS 301

Query: 160 SV--EGLFDVIVSNPPYIES-VIVDCLGLEVRDFDPRISLDGGI 200
            +  E   D+++ NPP+ +   I D +  ++ +   R    GG+
Sbjct: 302 HLPNEVQADLVLCNPPFHQGEAITDHIAWQMFNDAKRALKPGGL 345


>gi|332712019|ref|ZP_08431949.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332349347|gb|EGJ28957.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 440

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 28/48 (58%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           ILD G GTG   L L + +P  K +G+DIS ++L++A+      G  E
Sbjct: 61  ILDAGCGTGYGSLTLAEANPGAKIIGIDISEQSLDLARKRLSHYGFDE 108


>gi|315500982|ref|YP_004079869.1| methyltransferase type 12 [Micromonospora sp. L5]
 gi|315407601|gb|ADU05718.1| Methyltransferase type 12 [Micromonospora sp. L5]
          Length = 496

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G GA+  AL+ +  F + VGVD+S ++L +A      + + ER
Sbjct: 302 RVLDLGCGGGALLTALVADRRFTEVVGVDVSDRSLGLAARRLRLDRLPER 351


>gi|254820322|ref|ZP_05225323.1| putative methyltransferase [Mycobacterium intracellulare ATCC
           13950]
          Length = 257

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           R+LDLG G+G    A+L+  P  +   VD++   L  A++     G+ ER +  + D
Sbjct: 40  RLLDLGVGSGRALSAVLRRRPDVRATAVDLAPNMLSTARALFDAEGIGERVELRRED 96


>gi|166031898|ref|ZP_02234727.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC
           27755]
 gi|166028351|gb|EDR47108.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC
           27755]
          Length = 183

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 10/117 (8%)

Query: 64  RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           RL L + D  + RP T+ + ++   F++   E  D    LDL +G+G + +  L      
Sbjct: 10  RLQLKTLDGMDTRPTTDRIKETL--FNMISAELYDS-NFLDLFSGSGGIGIEALSRGAA- 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174
             V V+ + KA++  + N  +  + +R  T+Q D F+++     E  F+ I  +PPY
Sbjct: 66  NAVFVEKNPKAMKCIQENLESTKLKDRAKTMQMDVFAALSRLNGEWKFEYIFMDPPY 122


>gi|220914767|ref|YP_002490075.1| methyltransferase small [Methylobacterium nodulans ORS 2060]
 gi|219952518|gb|ACL62908.1| methyltransferase small [Methylobacterium nodulans ORS 2060]
          Length = 299

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG+G + L LL+          D+S  A+ +A  N   N  S R      D F 
Sbjct: 81  RLLDLGTGSGILAL-LLRSLGAHDITASDVSTSAVGLALENESLNFRSSRIRFFSGDLFV 139

Query: 160 SV-EG-LFDVIVSNPP 173
            + EG  +D ++ NPP
Sbjct: 140 GLPEGDRYDTVIFNPP 155


>gi|111025328|ref|YP_707748.1| methyltransferase [Rhodococcus jostii RHA1]
 gi|110824307|gb|ABG99590.1| methyltransferase [Rhodococcus jostii RHA1]
          Length = 260

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 9/104 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  GTG + +  +K+    +   VD+S +A      NA  +  S R   ++ D   
Sbjct: 77  RVLDLCAGTGVLSVCAVKQG-AGRVTAVDVSRRAFATTWINARLHRRSVRV--VRGDLTE 133

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            V    FD++VSNPPY+ +   +  GL         S D G DG
Sbjct: 134 PVRSERFDLVVSNPPYVPA---ETAGLPYSGVA--RSWDAGTDG 172


>gi|327479677|gb|AEA82987.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri DSM 4166]
          Length = 332

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   L +  P  + V +D+   A+E ++     NG+    + +  D   
Sbjct: 194 RLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLAANGLEA--EVIAGDGID 251

Query: 160 SVEGLFDVIVSNPPYIESV 178
           +       I+SNPP+ + V
Sbjct: 252 AAPRQLAAIISNPPFHQGV 270


>gi|229002424|ref|ZP_04160533.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
 gi|228758619|gb|EEM07751.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
          Length = 207

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 10/79 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQS 155
           +ILD+GTG+G++ + L K  P     G+D      E +K+    NA   GVS+R D L++
Sbjct: 40  KILDIGTGSGSLIIKLAKTFPKPFLTGIDYWGGNWEYSKAQCQQNAEIEGVSDRVDFLKA 99

Query: 156 DW----FSSVEGLFDVIVS 170
                 F+  E  FD+IVS
Sbjct: 100 SAAELPFNDDE--FDIIVS 116


>gi|118469810|ref|YP_886143.1| methylase [Mycobacterium smegmatis str. MC2 155]
 gi|118171097|gb|ABK71993.1| methylase, putative [Mycobacterium smegmatis str. MC2 155]
          Length = 222

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 9/132 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +++LL+D+     L R  +    R+LDL TG+G V +A            +DI  
Sbjct: 10  YRPQEDSQLLIDA-----LERSGEVPGRRVLDLCTGSGVVAIAAAHLGAEHV-TALDICP 63

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A+E A +NA +   +   D     W  ++    FD++V NPPY+ +      G      
Sbjct: 64  RAVEYATANAASA--AADVDVRLGTWNEALNWEPFDLVVCNPPYVPTSPAVDPGSVAPWA 121

Query: 191 DPRISLDGGIDG 202
            P  + DGG DG
Sbjct: 122 GPATAWDGGADG 133


>gi|134300333|ref|YP_001113829.1| 50S ribosomal protein L11 methyltransferase [Desulfotomaculum
           reducens MI-1]
 gi|172044330|sp|A4J7F1|PRMA_DESRM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|134053033|gb|ABO51004.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfotomaculum reducens MI-1]
          Length = 308

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 13/125 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GTGTG + +   K     + + VD+   A+++++ N   NGV +  +    +    
Sbjct: 174 VADVGTGTGILAITSAKLGAA-RVLAVDLDEVAVKVSQENVERNGVQDIVEVFHGNLLDK 232

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHL 217
           VE   DV+++N   I + ++  L  +V    PRI   GG     G+  +R  A+ V + L
Sbjct: 233 VESKVDVVIAN---IVANVIMILAPDV----PRILKHGGYFITSGIIQFR--AEEVRQKL 283

Query: 218 NKDGL 222
            + G 
Sbjct: 284 EQTGF 288


>gi|57641208|ref|YP_183686.1| SAM-dependent methyltransferase [Thermococcus kodakarensis KOD1]
 gi|57159532|dbj|BAD85462.1| SAM-dependent methyltransferase, UbiE/COQ5 family [Thermococcus
           kodakarensis KOD1]
          Length = 249

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           KR+V R+LDL  GTG   L L +    ++ +G+D+  + L +A+  A   G++ +F
Sbjct: 39  KREVKRVLDLACGTGIPTLELAERG--YEVLGLDLHEEMLRVARRKAEARGLNVKF 92


>gi|186680772|ref|YP_001863968.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102]
 gi|186463224|gb|ACC79025.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102]
          Length = 334

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K + +++LD+    G   +A+ + +P  +  GVD +   LE+AK NA   GV+ R+ T+ 
Sbjct: 162 KIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWAS-VLEVAKENARIQGVASRYHTIA 220

Query: 155 SDWF 158
              F
Sbjct: 221 GSAF 224


>gi|292489659|ref|YP_003532549.1| multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
           [Erwinia amylovora CFBP1430]
 gi|292898127|ref|YP_003537496.1| methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291197975|emb|CBJ45077.1| putative methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291555096|emb|CBA23219.1| Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
           [Erwinia amylovora CFBP1430]
 gi|312173834|emb|CBX82088.1| Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
           [Erwinia amylovora ATCC BAA-2158]
          Length = 351

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +  +    ILDLG G G   +      P   GVG+DIS  A+E A    +   ++ R
Sbjct: 163 LQALSDKSSSHILDLGCGAGQFLIDACLRDPSLTGVGLDISAPAIEEANELCIKYNLTNR 222

Query: 150 F-----DTLQSDWFSSVEGLFDVIVS 170
                 D  Q D +S      DVI +
Sbjct: 223 LTFVVGDAFQPDSWSEECRKADVICA 248


>gi|302560459|ref|ZP_07312801.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus
           Tu4000]
 gi|302478077|gb|EFL41170.1| UbiE/COQ5 family methyltransferase [Streptomyces griseoflavus
           Tu4000]
          Length = 284

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 10/91 (10%)

Query: 87  AFSLPRIEKRDVV---RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           AF+ P  +   +    R+LD+G GTG   L   + +     +GVD+S   LE A+ +AV 
Sbjct: 34  AFNAPLFDAAGIAAGDRVLDVGCGTGQTTLIAARRAYDGSVLGVDLSAPMLERARRDAVA 93

Query: 144 NGVS----ERFDTLQSDWFSSVEGLFDVIVS 170
            GV     E+ D  Q   F   E  FDV++S
Sbjct: 94  EGVGNVGFEQGDA-QVHPFPGQE--FDVVLS 121


>gi|253577952|ref|ZP_04855224.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850270|gb|EES78228.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 837

 Score = 36.6 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FD 151
           + +D ++ILD+GTG G   + L +    +K   VD + + L+ AK NA    + ER  F 
Sbjct: 46  KAKDEIKILDIGTGPGFFPVILAEAG--YKVTAVDYTQEMLDTAKRNA--GNLCERISFY 101

Query: 152 TLQSDWFSSVEGLFDVIVS 170
            + +      +G+FDV++S
Sbjct: 102 KMDAQNLEFEDGVFDVVIS 120


>gi|218290104|ref|ZP_03494266.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
 gi|218239813|gb|EED07002.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
          Length = 413

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 7/83 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD    TGA  +  L          VDIS  A+E+A+ NA  NGV +R D   ++
Sbjct: 235 DGAHVLDCFCHTGAFAVHALHYGAAHV-TAVDISADAVELARQNARRNGVLDRADFAVAN 293

Query: 157 WFSSVE------GLFDVIVSNPP 173
            F  +         +DV++ +PP
Sbjct: 294 AFDYLREQDARGARYDVVILDPP 316


>gi|115374327|ref|ZP_01461611.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368637|gb|EAU67588.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 247

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGTG + +A  K     + VG D    ++E+A  NA  N   +    L       
Sbjct: 119 VLDVGTGTGVLAIAAKKLG-AGRVVGTDNDPTSVELAHENAAVNDTPDV--ELSGKGLEQ 175

Query: 161 VEGLFDVIVSN 171
           V G FD++V+N
Sbjct: 176 VPGTFDLVVAN 186


>gi|28378753|ref|NP_785645.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|28271590|emb|CAD64495.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum
           WCFS1]
          Length = 187

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 17/139 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   RL  +    + RP T+ + ++      P     D  + LDL  G+G + +  +  
Sbjct: 7   DFGGRRLK-AVPGMQTRPTTDKVKEAVFNIIGPYF---DGGQSLDLFAGSGGLSIEAVSR 62

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
               + V +D   +A++  K N     V ERF+ ++ D        +S +  FD +  +P
Sbjct: 63  G-VARAVLIDRQYQAIKTIKDNIAVTKVPERFEVIKGDAERILDRLASQDEHFDWVFLDP 121

Query: 173 PYIESVIV------DCLGL 185
           PY +  IV      D LGL
Sbjct: 122 PYAKQQIVKDIQHCDALGL 140


>gi|87307314|ref|ZP_01089459.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM
           3645]
 gi|87290054|gb|EAQ81943.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM
           3645]
          Length = 389

 Score = 36.6 bits (83), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LD+   TG   LA  K     + +G+D S KA+++A+ NA  NG+S  RF+++  D F
Sbjct: 217 RVLDMFCYTGGFALAAAKLGGASEVIGIDGSDKAIDLARRNAERNGLSNVRFESV--DAF 274

Query: 159 SSVEGL------FDVIVSNPP 173
             ++ L      FD ++ +PP
Sbjct: 275 DHLKALVDAGEKFDAVILDPP 295


>gi|329117152|ref|ZP_08245869.1| hypothetical protein SPB_1152 [Streptococcus parauberis NCFD 2020]
 gi|326907557|gb|EGE54471.1| hypothetical protein SPB_1152 [Streptococcus parauberis NCFD 2020]
          Length = 386

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 13/63 (20%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           G DI  + +EIAK NAV  G+++       R   L++D    V G   V++SNPPY E +
Sbjct: 261 GFDIDARLIEIAKENAVEAGLADVITFKQMRLQDLKTD---KVNG---VLISNPPYGERL 314

Query: 179 IVD 181
           + D
Sbjct: 315 LDD 317


>gi|325913301|ref|ZP_08175669.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           UPII 60-B]
 gi|325477404|gb|EGC80548.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           UPII 60-B]
          Length = 448

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           ++       + + L   W +  EGL  DVI  +PP
Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|288930472|ref|YP_003434532.1| hypothetical protein Ferp_0067 [Ferroglobus placidus DSM 10642]
 gi|288892720|gb|ADC64257.1| protein of unknown function Met10 [Ferroglobus placidus DSM 10642]
          Length = 277

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 21/172 (12%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGW--RDF----YNVRLTLSSDTFEP 74
           +I  PD +L  +    +  AI+   KH ++I R +G    DF    Y V     ++T   
Sbjct: 31  IIEIPDEILHLKDE--IAKAILAKHKHVKTILRKVGEVEGDFRIAKYEVIYGGETETIAK 88

Query: 75  RPETELLVDSALAF-------SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 LVD   A+          RI K  R+  R+L +  G G   + + + S   + +
Sbjct: 89  EHSCRFLVDPTKAYYTVKLSGERERIAKLVREGERVLVMYAGVGPYAIVIARLSKPREVI 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPY 174
           G++++  A+E  K N   N V      ++    D    +EG+FD +V   PY
Sbjct: 149 GIELNPVAVEYFKKNVKLNKVEGIVKVIEGDVRDVVPKLEGVFDRVVMPAPY 200


>gi|239994805|ref|ZP_04715329.1| type I site-specific deoxyribonuclease [Alteromonas macleodii ATCC
           27126]
          Length = 530

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAV 142
           S L   L  + K  +  + D   G+G++ L + KE     K  G + +     +A+ N +
Sbjct: 209 SKLLAKLVTMGKTKLKSVYDPTCGSGSLLLRVAKEVKEVGKYCGQESNPSTYNLARMNMI 268

Query: 143 TNGVSER-FDTLQSDWFSS---VEGLFDVIVSNPPY 174
            +GV  R FD  Q D   +   +E  F+ +V+NPP+
Sbjct: 269 LHGVHYRQFDIQQDDTLETPHHIEERFEAVVANPPF 304


>gi|21328671|gb|AAM48677.1| magnesium-protoporphyrin O-methyltransferase [uncultured marine
           proteobacterium]
          Length = 221

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD G GTGA+   L +       V VDIS K + IAK     + VS     +  D F
Sbjct: 60  ARVLDAGCGTGALAFQLAQAGADV--VAVDISPKLITIAKQRQPAH-VSGTLKLMAGDMF 116

Query: 159 SSVEGLFDVIVS 170
               G FD IV+
Sbjct: 117 DPGLGHFDHIVA 128


>gi|332193981|gb|AEE32102.1| S-adenosylmethionine-dependent methyltransferase domain-containing
           protein [Arabidopsis thaliana]
          Length = 538

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D  TG G   +     S +   + +D+  K L++AK NA   GV+++ D ++ D+F  
Sbjct: 372 VIDCFTGVGGNAIQFASRSHYV--IAIDLDPKKLDLAKHNAAIYGVADKIDFVKGDFFDL 429

Query: 161 VEGL-FDVIVSNPPY 174
              L    +  +PP+
Sbjct: 430 AHNLKAGTVFLSPPW 444


>gi|328886401|emb|CCA59640.1| hypothetical protein SVEN_6354 [Streptomyces venezuelae ATCC 10712]
          Length = 357

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V RILD+G+G G V   L +  P  + V VD + + L  A+  A   G+  R  TL ++
Sbjct: 116 VRRILDVGSGPGVVTSVLARAFPEAEAVAVDGTPELLTRAREYAEARGLGGRVSTLHAE 174


>gi|315652701|ref|ZP_07905675.1| O-methyltransferase [Eubacterium saburreum DSM 3986]
 gi|315484903|gb|EFU75311.1| O-methyltransferase [Eubacterium saburreum DSM 3986]
          Length = 249

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DL TG+G V + L  ++   K  G++I     ++A  +   N + E+ D +  D  +++
Sbjct: 54  VDLCTGSGIVPILLSTKTKAKKITGIEIQSDIADMASRSVSYNKLDEKIDIINDDISNAL 113

Query: 162 EGL----FDVIVSNPPYIESV 178
           + +     D +  NPPY++ +
Sbjct: 114 KYIKHSCVDTVCVNPPYMKDM 134


>gi|261749587|ref|YP_003257273.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
 gi|261497680|gb|ACX84130.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Blattabacterium sp. (Periplaneta americana) str. BPLAN]
          Length = 243

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 37/65 (56%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L +   +++ ++LD+ TGTG + L + K+      +G+D S + L+IA++    N + +R
Sbjct: 47  LTKFSTKNIQKVLDIATGTGDLALLIAKKFHKTSVIGLDPSKEMLKIARNKIKDNFLKKR 106

Query: 150 FDTLQ 154
              +Q
Sbjct: 107 IQFVQ 111


>gi|237799768|ref|ZP_04588229.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331022623|gb|EGI02680.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 332

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A    +   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNEVIMLDVDAFATASVRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLEAQ--VLTGDGIDAAPMDLNTILSNPPFHVGVHTDYMATE 278


>gi|237730016|ref|ZP_04560497.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908622|gb|EEH94540.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 378

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDW 157
            I+DLG G G + + LL ++P    V VD S  A+  ++ N  +N     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVIGMTLLAKNPEASVVFVDESPMAVASSRLNVESNMPEALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPYIES-VIVDCLGLEV 187
            S VE   F+ ++ NPP+ +   + D +  E+
Sbjct: 291 LSGVEPFRFNAVLCNPPFHQKHALTDNIAWEM 322


>gi|172037437|ref|YP_001803938.1| hypothetical protein cce_2524 [Cyanothece sp. ATCC 51142]
 gi|171698891|gb|ACB51872.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 204

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 26/40 (65%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +LDLG GTG +   L +  P  +G+GVD+S + L+ A+ N
Sbjct: 48  VLDLGCGTGRLLNRLARTFPDLQGIGVDLSPQMLKQAREN 87


>gi|104774034|ref|YP_619014.1| Type I restriction-modification system, modification subunit
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103423115|emb|CAI97854.1| Type I restriction-modification system, modification subunit
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 532

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 13/109 (11%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAV------TNGVSER 149
           + + D   G+G++ L   K  P    +   G +I+     +A+ N +       N     
Sbjct: 218 MTVYDPAMGSGSLLLNFKKYVPNSSRITYYGQEINTSTFNLARMNMILHRVDLANQKLRN 277

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            DTL  DW +     FD +V NPPY +    D   L+    DPR S  G
Sbjct: 278 GDTLDEDWPAEEITNFDSVVMNPPYSQKWKADKGFLD----DPRFSKYG 322


>gi|328881226|emb|CCA54465.1| Ribosomal RNA small subunit methyltransferase C [Streptomyces
           venezuelae ATCC 10712]
          Length = 387

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDW 157
            R+ DLG G G V LA+    P  + V  D S +A+  A+ N  T+ G   + + L  D 
Sbjct: 243 ARVADLGCGNGVVGLAIALHEPDAELVFTDESYQAVASAEENFRTHVGDGRKAEFLVGDG 302

Query: 158 FSSV-EGLFDVIVSNPPY 174
            + + +G  D++++NPP+
Sbjct: 303 LADLPDGSVDLVLNNPPF 320


>gi|323140978|ref|ZP_08075888.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium
           sp. YIT 12067]
 gi|322414515|gb|EFY05324.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium
           sp. YIT 12067]
          Length = 407

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L   K         VDIS +A+++A+ NA  N  S+    LQ++ F  
Sbjct: 235 VLDCFTHTGSFALNAAKGGAA-SVTAVDISAEAVQMAEHNAAINNCSDVMHGLQANVFDL 293

Query: 161 VEGLF-------DVIVSNPP 173
           +  LF       D I+ +PP
Sbjct: 294 LSDLFNKHSREYDFIILDPP 313


>gi|257465361|ref|ZP_05629732.1| ribosomal protein L11 methyltransferase [Actinobacillus minor 202]
 gi|257451021|gb|EEV25064.1| ribosomal protein L11 methyltransferase [Actinobacillus minor 202]
          Length = 294

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-RAIGIDIDPQAILASTNNAEANGVADRLELFLAKD--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L DV+V+N
Sbjct: 219 PKDLLADVVVAN 230


>gi|240949870|ref|ZP_04754195.1| ribosomal protein L11 methyltransferase [Actinobacillus minor
           NM305]
 gi|240295687|gb|EER46392.1| ribosomal protein L11 methyltransferase [Actinobacillus minor
           NM305]
          Length = 294

 Score = 36.6 bits (83), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-RAIGIDIDPQAILASTNNAEANGVADRLELFLAKD--Q 218

Query: 160 SVEGLFDVIVSN 171
             + L DV+V+N
Sbjct: 219 PKDLLADVVVAN 230


>gi|189459439|ref|ZP_03008224.1| hypothetical protein BACCOP_00062 [Bacteroides coprocola DSM 17136]
 gi|189433896|gb|EDV02881.1| hypothetical protein BACCOP_00062 [Bacteroides coprocola DSM 17136]
          Length = 1002

 Score = 36.6 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 10/68 (14%)

Query: 119 SPFFKGVGVDISCKALEIAKS-----NAVTNGVSERFDTLQSDWFSSV-----EGLFDVI 168
           S   KG+G +I C    +         A+ + + E  +T   DW SS       G FD +
Sbjct: 478 SQILKGIGANIRCGNTLVGTDIEQHFPAIADNMRELQETNAFDWESSFPTVFENGGFDFV 537

Query: 169 VSNPPYIE 176
           V NPPY+E
Sbjct: 538 VGNPPYVE 545


>gi|225011632|ref|ZP_03702070.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Flavobacteria bacterium MS024-2A]
 gi|225004135|gb|EEG42107.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Flavobacteria bacterium MS024-2A]
          Length = 243

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           ILD+ TGTG + LAL K +   K +G+DIS   LEI K   +   +++R
Sbjct: 61  ILDIATGTGDLVLALAKLNA-KKIIGLDISPGMLEIGKKKVLAQNLTDR 108


>gi|86356538|ref|YP_468430.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CFN 42]
 gi|86280640|gb|ABC89703.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CFN 42]
          Length = 419

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 39/71 (54%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RIL++G+G G + + L + +      G+ +S + L++++S A   G+SER      D+ +
Sbjct: 176 RILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRSRAEKRGLSERVRFELQDYRT 235

Query: 160 SVEGLFDVIVS 170
                FD IVS
Sbjct: 236 MNGRKFDRIVS 246


>gi|327330728|gb|EGE72474.1| type I restriction-modification system, M subunit
           [Propionibacterium acnes HL097PA1]
          Length = 522

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 14/111 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK--ESPFFKG-VGVD 128
           F P+  +E+L   A+       +K+ + ++ D   G+G++ L   K       KG  G +
Sbjct: 205 FTPQEVSEVLARIAVG------DKKRIGKVYDPAVGSGSLLLKFAKLLGPENVKGFYGQE 258

Query: 129 ISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV----EGLFDVIVSNPPY 174
           I+     +A+ N   +G++ E+FD +  D  ++     +  F+ IVSNPPY
Sbjct: 259 INLTTYNLARINMFLHGINYEQFDIVLGDTLTNPMHRDKEPFEAIVSNPPY 309


>gi|227508000|ref|ZP_03938049.1| methyltransferase family protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227192544|gb|EEI72611.1| methyltransferase family protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 241

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDI------SCKALEIAKSNAV 142
           L + +  D   +LDLG G GAV +AL K   PF K VGVD+      S  +LE  K N  
Sbjct: 71  LAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADQSHNSLEETKRNLE 130

Query: 143 TNGVSERFDTLQSD 156
              V++  + + +D
Sbjct: 131 IAKVADHTELVTAD 144


>gi|148979052|ref|ZP_01815297.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3]
 gi|145962025|gb|EDK27313.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3]
          Length = 340

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 11/123 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRP----ETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAV 111
           W   Y V +   S T +  P      E  V S L   +LP ++ +    +LD G G G +
Sbjct: 159 WFKTYTVNIGEQSLTVKSLPGVFSHGEFDVGSQLLLDTLPTLKGK----VLDFGCGAGVL 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +   +P  +    DIS  A+  +++    NG++ +     SD +S     +  I+SN
Sbjct: 215 GAVMASRNPDIELEMCDISAFAVASSQATLEANGLTGK--VFASDVYSDTAQDYQFIISN 272

Query: 172 PPY 174
           PP+
Sbjct: 273 PPF 275


>gi|169344572|ref|ZP_02865538.1| modification methylase BsuBI [Clostridium perfringens C str.
           JGS1495]
 gi|169297182|gb|EDS79294.1| modification methylase BsuBI [Clostridium perfringens C str.
           JGS1495]
          Length = 493

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 26/101 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKE--SPFFKG-----------VGVDISCKALEIAKSNAV 142
           +D + ILD G GTG +  +L+ +     FKG           V +D+  K ++I K+   
Sbjct: 47  KDNLNILDCGAGTGILAFSLVDKLIEEGFKGTLNIDLYENDEVVIDVLLKNIDIYKAKYK 106

Query: 143 TNGVSERFDTLQSDWF---------SSVEGLFDVIVSNPPY 174
              +       QS++           S +G +D+++SNPPY
Sbjct: 107 NLNIK----VFQSNFILENMKLWEDKSFKGKYDIVISNPPY 143


>gi|189424156|ref|YP_001951333.1| hypothetical protein Glov_1090 [Geobacter lovleyi SZ]
 gi|189420415|gb|ACD94813.1| protein of unknown function Met10 [Geobacter lovleyi SZ]
          Length = 391

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           +G+DIS +A+ +A  NA  NG+S+R    + D F  +  L      F V+V +PP
Sbjct: 243 LGLDISERAVALAGRNAALNGLSDRVSFEECDAFDRLRSLKLEGRSFGVVVMDPP 297


>gi|147920880|ref|YP_684471.1| methyltransferase [uncultured methanogenic archaeon RC-I]
 gi|116077947|emb|CAJ35145.2| putative methyltransferase (UbiE/COQ5 family) [uncultured
           methanogenic archaeon RC-I]
          Length = 220

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF 158
           R+LD+G+G G + + L   +P    VG+D+S   ++IA + A   G+    F    +D  
Sbjct: 51  RVLDVGSGPGRLPIMLAARNPRLYVVGLDLSGDMVKIASATAAKKGLHNVEFRQGSADTL 110

Query: 159 SSVEGLFDVIVSN 171
              +  FD+++S 
Sbjct: 111 PFGDREFDLVIST 123


>gi|90407656|ref|ZP_01215836.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
 gi|90311247|gb|EAS39352.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
          Length = 384

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   I+DLG G G V +A L+     K   +D S  A++ A+ N + N   ER D  +  
Sbjct: 237 DFSNIVDLGCGNGIVGMAALEYYADSKVTFIDESYMAVDSARINTLKNFEEERSDNAR-- 294

Query: 157 WFSSVEGL-------FDVIVSNPPYIESVIV 180
            F    GL        D+I+ NPP+ +  ++
Sbjct: 295 -FVVNNGLVGFKAASHDLILCNPPFHQQQVI 324


>gi|87307648|ref|ZP_01089792.1| putative methyltransferase [Blastopirellula marina DSM 3645]
 gi|87289818|gb|EAQ81708.1| putative methyltransferase [Blastopirellula marina DSM 3645]
          Length = 354

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+G GTG    ALL+++P  + +  D   + L+IA       GV++R + +  D
Sbjct: 186 DAKLLLDVGGGTGIYSHALLQKNPHLRAIVFD-RPQVLKIAAQMGEAYGVNDRCEFVSGD 244

Query: 157 WFSS--VEGLFDVIVSN 171
            F+    EG   +++SN
Sbjct: 245 MFADPLPEGADTILLSN 261


>gi|313682871|ref|YP_004060609.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994]
 gi|313155731|gb|ADR34409.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994]
          Length = 233

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---LEIAKSNAVTNGVSERFDTLQSD 156
           ++LD+G G+G V L + ++   FK V ++ S K     E A+ NA  NG+   +   + D
Sbjct: 31  KMLDVGAGSGIVGLLVARD---FKEVVLEGSEKQSLYAEFARRNAQINGIG--YTLHEGD 85

Query: 157 WFS-SVEGLFDVIVSNPPY 174
           +      G +D IVSNPP+
Sbjct: 86  FLELGGHGSYDWIVSNPPF 104


>gi|42571775|ref|NP_973978.1| WW domain-containing protein [Arabidopsis thaliana]
          Length = 538

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D  TG G   +     S +   + +D+  K L++AK NA   GV+++ D ++ D+F  
Sbjct: 370 VIDCFTGVGGNAIQFASRSHYV--IAIDLDPKKLDLAKHNAAIYGVADKIDFVKGDFFDL 427

Query: 161 VEGL-FDVIVSNPPY 174
              L    +  +PP+
Sbjct: 428 AHNLKAGTVFLSPPW 442


>gi|15603175|ref|NP_246248.1| hypothetical protein PM1310 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721672|gb|AAK03394.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 270

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSE 148
           + R++  +V  +LD+G G GA+CLA+   +P  K V G+D S   L + +  A   G  E
Sbjct: 56  VSRMDLNNVESLLDVGCGGGAICLAI---APQVKQVYGLDYSEGMLSVLQQRATKLGF-E 111

Query: 149 RFDTLQSDWFSSVE 162
               +Q  W  S E
Sbjct: 112 HVQAIQKSWDDSWE 125


>gi|95929550|ref|ZP_01312292.1| conserved hypothetical protein 95 [Desulfuromonas acetoxidans DSM
           684]
 gi|95134247|gb|EAT15904.1| conserved hypothetical protein 95 [Desulfuromonas acetoxidans DSM
           684]
          Length = 189

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S    E RP ++ + ++  +    R+   D + +LDL  GTGA+ L  L       G  V
Sbjct: 15  SVQGIEIRPTSDRVREALFSSLTSRLGSFDGMEVLDLFAGTGALGLEALSRGAAH-GCFV 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVI 179
           D   +A ++  +N+    +++R   +          + G FD+I  +PPY + ++
Sbjct: 74  DSGRQAQKLIHTNSAHCAMAQRCQLIALPVERALDKLRGKFDLIFLDPPYRKGLV 128


>gi|331696796|ref|YP_004333035.1| methyltransferase small [Pseudonocardia dioxanivorans CB1190]
 gi|326951485|gb|AEA25182.1| methyltransferase small [Pseudonocardia dioxanivorans CB1190]
          Length = 497

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG G   L   + S     VG D++ +AL +A +    +GV  R +  +
Sbjct: 153 RRPVDATLDLGTGCGVQALHASRHSRTV--VGTDVAPRALALAAATLALSGV--RAELRE 208

Query: 155 SDWFSSVEG-LFDVIVSNPPYIES 177
             W   V G  F  +VSNPP++  
Sbjct: 209 GPWLQPVAGRRFAHVVSNPPFVPG 232


>gi|284097326|ref|ZP_06385459.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3]
 gi|283831164|gb|EFC35141.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3]
          Length = 217

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFS 159
           LD+GTG   + + L +  P  +   +D+S + L+IAK +    G+++R   + + +    
Sbjct: 46  LDVGTGPAQIPILLAQRCPDIRITAIDLSEEMLKIAKRHVADAGLTDRITLELVDAKTLP 105

Query: 160 SVEGLFDVIVSN 171
             +  FD ++SN
Sbjct: 106 YPDNTFDGLISN 117


>gi|18977544|ref|NP_578901.1| RNA methyltransferase [Pyrococcus furiosus DSM 3638]
 gi|50401622|sp|Q8U1N4|Y1172_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF1172
 gi|18893255|gb|AAL81296.1| RNA methyltransferase [Pyrococcus furiosus DSM 3638]
          Length = 411

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+ +G G   + L K+    K VG D +  A+E+A  NA  N V   F  + SD   
Sbjct: 275 KVVDMYSGVGTFGVYLAKKG--MKVVGFDSNAFAIEMANKNAEINNVEAEF-FVASDREV 331

Query: 160 SVEGLFDVIVSNPP 173
            ++G FD ++ +PP
Sbjct: 332 DIKG-FDTVIVDPP 344


>gi|312875412|ref|ZP_07735416.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 2053A-b]
 gi|311089075|gb|EFQ47515.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 2053A-b]
          Length = 450

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTANDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           ++       + + L   W +  EGL  DVI  +PP
Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|225023544|ref|ZP_03712736.1| hypothetical protein EIKCOROL_00403 [Eikenella corrodens ATCC
           23834]
 gi|224943685|gb|EEG24894.1| hypothetical protein EIKCOROL_00403 [Eikenella corrodens ATCC
           23834]
          Length = 297

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 11/75 (14%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSD 156
           R+LD G G+G + +A LK        GVDI  +A+  ++SNA  N  + RF   D L   
Sbjct: 166 RVLDYGCGSGILAIAALKLGAAVAD-GVDIDEQAIVASRSNAEQNEAAARFFLPDDLP-- 222

Query: 157 WFSSVEGLFDVIVSN 171
                E  +DV+V+N
Sbjct: 223 -----EAEYDVVVAN 232


>gi|209524061|ref|ZP_03272612.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209495436|gb|EDZ95740.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 203

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   ILD+G GTG +   L K+ P  +G G+D+S + ++ AK+    N   +R   L
Sbjct: 41  EFPNSANILDIGCGTGRLLQRLAKQFPDLQGTGLDLSPQMIKEAKNQ---NVYGDRLQFL 97

Query: 154 QSD 156
           Q +
Sbjct: 98  QGN 100


>gi|307544769|ref|YP_003897248.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM
           2581]
 gi|307216793|emb|CBV42063.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM
           2581]
          Length = 304

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+G G+G + +A L+        G DI  +AL  ++ NA  NGV E    L+     
Sbjct: 169 EVLDVGCGSGILAIAALRLG-ARHATGTDIDPQALTASRDNAERNGVDETALRLEYPESL 227

Query: 160 SVEGLFDVIVSN 171
             E  F ++V+N
Sbjct: 228 EAEARFPLVVAN 239


>gi|282164174|ref|YP_003356559.1| putative methyltransferase [Methanocella paludicola SANAE]
 gi|282156488|dbj|BAI61576.1| putative methyltransferase [Methanocella paludicola SANAE]
          Length = 197

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLG GTG  A+   LL      K +G+D   +ALEIAK NA    V   +       F
Sbjct: 50  VADLGCGTGVLAIGAGLLGTK---KIIGIDSDIRALEIAKKNASQLDVDIAWVCCDVRDF 106

Query: 159 SSVEGLFDVIVSNPPY 174
               G FD +V NPP+
Sbjct: 107 C---GRFDTVVMNPPF 119


>gi|195437336|ref|XP_002066596.1| GK19357 [Drosophila willistoni]
 gi|194162681|gb|EDW77582.1| GK19357 [Drosophila willistoni]
          Length = 217

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDIS 130
           +EP  ++ LL+D AL   L  +E++     +++G+G+G +  AL K+ S     +  DI+
Sbjct: 18  YEPAEDSFLLLD-ALEKDLQFLEEQQPHLCVEIGSGSGVIITALSKKFSNSALCLATDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
            +A +  KS A+ N    + + L  +    +     D++V NPPY+
Sbjct: 77  PRACKATKSTALKNHA--QVECLNCNLTQPLRKRSVDLLVFNPPYV 120


>gi|167568205|ref|ZP_02361079.1| methyltransferase [Burkholderia oklahomensis C6786]
          Length = 283

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESPFFKGVGVDISCK 132
           P  ELLV++        +   D   +LD+G G GA  LA   LL E    + VGVD+S  
Sbjct: 36  PFAELLVEA--------VRAGDGRHVLDVGCGAGATTLAVARLLGER--GRCVGVDVSEP 85

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            +  A+  A   G   RF    +   +     FD I+S
Sbjct: 86  LIAAARGRAEREGAPARFVRADAQTHAFAPASFDTIIS 123


>gi|163789936|ref|ZP_02184372.1| Putative methyltransferase [Carnobacterium sp. AT7]
 gi|159874876|gb|EDP68944.1| Putative methyltransferase [Carnobacterium sp. AT7]
          Length = 250

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVGVDISCKALEIAKS 139
           +D+ L     +  K D  +++DL  G G V L L ++  SP    +G++I  + +++A  
Sbjct: 32  LDAVLLADFAQPAKHDRAKVVDLCAGNGVVGLLLSQKTNSPI---IGIEIQERLVDMANR 88

Query: 140 NAVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPY 174
               NG+ ++   +  D      W    +   D +  NPPY
Sbjct: 89  TIQVNGLEKQVSIVHGDLSDASKWIK--KDTVDTLTCNPPY 127


>gi|156741118|ref|YP_001431247.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
 gi|156232446|gb|ABU57229.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
          Length = 198

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L  I  +    ILDLG G G + + L +  P  + + VD    A+  A+ NA
Sbjct: 39  VDEGTDLFLRTIAPQTPQTILDLGCGCGVIGIVLARWFPQARVILVDRDLLAVRYARHNA 98

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPP 173
             N  +   + + S  F  V  + FD+IVSN P
Sbjct: 99  ALNQ-TPNVEVIGSVGFEYVPDIPFDLIVSNIP 130


>gi|73661501|ref|YP_300282.1| SAM-dependent methyltransferase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72494016|dbj|BAE17337.1| putative SAM-dependent methyltransferase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 240

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ILD+GTG G   LA+L  +      G+D+S + ++ AK NA ++     F  + ++  
Sbjct: 47  MKILDIGTGAG--FLAILCGNLGSDVTGIDLSPEMIQSAKQNAESHHQDIHFQVMDAESL 104

Query: 159 SSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPR---ISLDG--GIDGLSHYRTIADG 212
              +  FD+++S N  ++           +R   P    I++D   G D  + Y+++   
Sbjct: 105 QFNDETFDMVISRNVTWLLPNTKAAYQEWLRVLKPNGKLINIDANYGNDSFTDYKSLNTE 164

Query: 213 VSRH-LNKDGLCSVE 226
            + H L KD L   E
Sbjct: 165 HAHHTLGKDMLAESE 179


>gi|84998804|ref|XP_954123.1| hypothetical protein [Theileria annulata]
 gi|65305121|emb|CAI73446.1| hypothetical protein TA02905 [Theileria annulata]
          Length = 569

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K   +RI+D  +G G   +  +  + F   +GV+++   +EI K N ++ GV  ++D + 
Sbjct: 280 KNKDIRIIDAFSGIGGSLIPFI--NNFNYSLGVELNKNRVEICKDNILSYGVKNQYDLIH 337

Query: 155 SDWFS 159
            D+F+
Sbjct: 338 DDFFN 342


>gi|88858407|ref|ZP_01133049.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas tunicata D2]
 gi|88820024|gb|EAR29837.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas tunicata D2]
          Length = 292

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 18/112 (16%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P    +L+D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 122 PDPTAVNVLLDPGLAFGTGTHATTALCLEWLESLDLTGKTVVDFGCGSGILGIAAIKLGA 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +ALE +  NA  NGV+ + +  L  D     E + DV+V+N
Sbjct: 182 A-RVIGIDIDPQALEASLDNAQRNGVAHQLEVYLPQD---QPEFMADVMVAN 229


>gi|158430598|pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-Methyltransferase
           (Npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
           Resolution
 gi|158430599|pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-Methyltransferase
           (Npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
           Resolution
          Length = 335

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K + +++LD+    G   +A+ + +P  +  GVD +   LE+AK NA   GV+ R+ T+ 
Sbjct: 163 KIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWAS-VLEVAKENARIQGVASRYHTIA 221

Query: 155 SDWF 158
              F
Sbjct: 222 GSAF 225


>gi|19920612|ref|NP_608733.1| CG9643 [Drosophila melanogaster]
 gi|7295871|gb|AAF51171.1| CG9643 [Drosophila melanogaster]
 gi|19527863|gb|AAL90046.1| AT11165p [Drosophila melanogaster]
 gi|220949650|gb|ACL87368.1| CG9643-PA [synthetic construct]
 gi|220958496|gb|ACL91791.1| CG9643-PA [synthetic construct]
          Length = 219

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LDLG G G   + L  E       GVD S KA+E+A++ A  N +S  +     
Sbjct: 58  KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAEDNKLSITYKVADL 117

Query: 156 DWFSSVEGLFDVIVSNPPY 174
               +  G FDV+     Y
Sbjct: 118 TQPQNELGQFDVVHDKGTY 136


>gi|115524138|ref|YP_781049.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisA53]
 gi|115518085|gb|ABJ06069.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisA53]
          Length = 294

 Score = 36.6 bits (83), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +++R++  +LDLGTGTG + +A  K +  P       DI   ++ +A  NA  NGV   F
Sbjct: 149 LKRRELRCVLDLGTGTGVLGIAAAKATHRPVLAS---DIDPVSVRVACDNAWLNGVGHLF 205

Query: 151 DTLQSDWFSS----VEGLFDVIVSN 171
           + + +  F+      +  FD++++N
Sbjct: 206 EGVCAAGFADARFRAKAPFDLVLAN 230


>gi|330465014|ref|YP_004402757.1| type 12 methyltransferase [Verrucosispora maris AB-18-032]
 gi|328807985|gb|AEB42157.1| methyltransferase type 12 [Verrucosispora maris AB-18-032]
          Length = 473

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           R+LDLG G GA+   L+ +  F + VG D+S +AL +A      + + ER
Sbjct: 295 RVLDLGCGGGALLATLIGDRRFTEIVGTDVSTQALSLAARRIRLDRLPER 344


>gi|220915009|ref|YP_002490317.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060]
 gi|219952760|gb|ACL63150.1| Methyltransferase type 11 [Methylobacterium nodulans ORS 2060]
          Length = 254

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L    AL  SL R    DVV  LDLG G G   LAL+ E    +G+G+D+S   +E
Sbjct: 34  PQRLLEYRLALVRSLARPRPSDVV--LDLGCGNGHHLLALVPE--VARGIGIDVSPGMIE 89

Query: 136 IAKSN 140
           +A + 
Sbjct: 90  LAHAR 94


>gi|152972181|ref|YP_001337327.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|166223420|sp|A6TES6|PRMA_KLEP7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|150957030|gb|ABR79060.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 293

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220

Query: 160 SVEGLFDVIVSN 171
           S++   DV+V+N
Sbjct: 221 SMKA--DVVVAN 230


>gi|86132735|ref|ZP_01051327.1| RNA methyltransferase, TrmA family [Dokdonia donghaensis MED134]
 gi|85816689|gb|EAQ37875.1| RNA methyltransferase, TrmA family [Dokdonia donghaensis MED134]
          Length = 471

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERF----DTLQ 154
           + DL TGTG +   + K++   K +GV+    A+  AK NA  NG+  +E F      + 
Sbjct: 327 VYDLYTGTGTIAQFVAKKAK--KVIGVEAVPDAITAAKENAKLNGIENAEFFVGDMKKVF 384

Query: 155 SDWFSSVEGLFDVIVSNPP 173
           +  F +  G  D+I+++PP
Sbjct: 385 NSEFIATHGEPDIIITDPP 403


>gi|323702402|ref|ZP_08114067.1| ribosomal protein L11 methyltransferase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532708|gb|EGB22582.1| ribosomal protein L11 methyltransferase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 308

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+GTGTG + +   K     K + VD+   A+++A+ N   N V  + + LQ +    V
Sbjct: 175 VDVGTGTGILAITAAKLG-AAKVIAVDLDEVAVQVARENVQRNQVQGQVEVLQGNLLDKV 233

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLN 218
               D++++N   I  VI+  L  +VR    +I   GG     G+  +R  A+ V   L 
Sbjct: 234 TQPVDLVIAN--IIAKVII-ILAPDVR----KILKPGGYFIASGIIRFR--AEEVREKLQ 284

Query: 219 KDGLCSVE 226
           + G   +E
Sbjct: 285 EAGFKVLE 292


>gi|27378697|ref|NP_770226.1| hypothetical protein bll3586 [Bradyrhizobium japonicum USDA 110]
 gi|27351846|dbj|BAC48851.1| bll3586 [Bradyrhizobium japonicum USDA 110]
          Length = 533

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+LG G G   L +  + P  + VGVD+S   +E  + N  T G+S     L  D  +
Sbjct: 58  RVLELGCGVGGNLLPMAFQYPNSEFVGVDLSGVTIERGQRNIATLGLSN-IKLLHCDIMN 116

Query: 160 SVE--GLFDVIVSNPPY 174
             E  G FD I+++  Y
Sbjct: 117 VDESFGQFDYIIAHGVY 133


>gi|239929819|ref|ZP_04686772.1| rRNA or tRNA methyltransferase [Streptomyces ghanaensis ATCC 14672]
 gi|291438151|ref|ZP_06577541.1| transferase [Streptomyces ghanaensis ATCC 14672]
 gi|291341046|gb|EFE68002.1| transferase [Streptomyces ghanaensis ATCC 14672]
          Length = 506

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L   + +   +    D++ +AL I       +G     +  +
Sbjct: 163 RRPVSSALDLGTGSGIQALHATRHA--TRVTATDVNPRALHITALTLALSGAPA-AELRE 219

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F+ V  +  +D+IVSNPP+   VI     L  R        DGG+ G    RT+   
Sbjct: 220 GSLFTPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQE 268

Query: 213 VSRHLNKDGLCS 224
               L++ G   
Sbjct: 269 AGERLSEGGFAQ 280


>gi|238896766|ref|YP_002921511.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262042816|ref|ZP_06015969.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|329997543|ref|ZP_08302821.1| ribosomal protein L11 methyltransferase [Klebsiella sp. MS 92-3]
 gi|238549093|dbj|BAH65444.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259039883|gb|EEW41001.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328539026|gb|EGF65070.1| ribosomal protein L11 methyltransferase [Klebsiella sp. MS 92-3]
          Length = 293

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220

Query: 160 SVEGLFDVIVSN 171
           S++   DV+V+N
Sbjct: 221 SMKA--DVVVAN 230


>gi|50294962|ref|XP_449892.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49529206|emb|CAG62872.1| unnamed protein product [Candida glabrata]
          Length = 228

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 27/131 (20%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE----------------TELLVDSALAFSLPRIEKRDVVR 100
           W DFY     L    FE  PE                 E L+D+    ++ +        
Sbjct: 18  WDDFY----ALERQNFEKNPEDTGECWFNDNDAEEKMVEFLMDACGMHNISQ-----ECT 68

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLGTG G +  AL +E    + +GVD S ++++ A        + E     Q+D F +
Sbjct: 69  MIDLGTGNGHLLFALTEEGFHGQMLGVDYSEQSVKFANEIVANKELGEHLRFAQADIFDN 128

Query: 161 --VEGLFDVIV 169
               G F+V++
Sbjct: 129 NWNPGKFNVVL 139


>gi|261838778|gb|ACX98544.1| hypothetical protein KHP_1356 [Helicobacter pylori 51]
          Length = 238

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++P        DS   +   R   ++   ILD+G+G G + L   +++P      V+   
Sbjct: 9   YQPLNAYSYNSDSLFLYDFSRPFIKNSGAILDIGSGCGVLGLLCARDNPLASVHLVEKDS 68

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K    ++ NA+    ++ F++   D+   +  L+DVIV NPP+
Sbjct: 69  KMAFCSQKNAIKFPNAQVFESDFLDFNPPI--LYDVIVCNPPF 109


>gi|260770654|ref|ZP_05879585.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP
           102972]
 gi|260614380|gb|EEX39568.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP
           102972]
          Length = 295

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV +  +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNASRNGVEDLIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|254360891|ref|ZP_04977037.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           PHL213]
 gi|153092370|gb|EDN73433.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           PHL213]
          Length = 293

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  +++NA  NGV+E+    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQPR 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 ELQA--DVVVAN 230


>gi|125558476|gb|EAZ04012.1| hypothetical protein OsI_26151 [Oryza sativa Indica Group]
          Length = 358

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL ESP  +   V+I  + ++   +     G++ +   +++D   +
Sbjct: 67  VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 125

Query: 161 VEGLFDVIVSNPPY 174
               FDV V+N PY
Sbjct: 126 EFPEFDVCVANIPY 139


>gi|189463386|ref|ZP_03012171.1| hypothetical protein BACCOP_04105 [Bacteroides coprocola DSM 17136]
 gi|189429815|gb|EDU98799.1| hypothetical protein BACCOP_04105 [Bacteroides coprocola DSM 17136]
          Length = 489

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 346 VYDLYTGTGTIANFVSRQAR--KVIGIEYVPEAIEDAKVNSQINGIENTLFYAGDMKDIL 403

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D F +  G  DVI+++PP
Sbjct: 404 TQD-FINEHGRPDVIITDPP 422


>gi|328717362|ref|XP_003246183.1| PREDICTED: hypothetical protein LOC100573105 [Acyrthosiphon pisum]
          Length = 592

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%)

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIES 177
           F K + VDI    + +AK NA   GV ++ + +  D+F   + ++G  DVIV++PP+   
Sbjct: 239 FDKVIAVDIDADKIIMAKQNAAIYGVGDKIEFIVGDYFKLENQIKG--DVIVTSPPW--- 293

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKD 220
                 G E    D    LD  +D  L   +TIA  +  HL K+
Sbjct: 294 -----GGPEYSKMDVIGPLDLYMDKILEVGKTIAPKILLHLPKN 332


>gi|323356746|ref|YP_004223142.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
 gi|323273117|dbj|BAJ73262.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
          Length = 214

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G + L+L   SP      VD++ +AL++ + NA + G++        D    +
Sbjct: 64  LDLGCGWGPISLSLALSSPHATVWAVDVNERALDLVRRNAESLGLTNVNAVRPEDVPDDI 123

Query: 162 EGLFDVIVSNPP 173
              F  I SNPP
Sbjct: 124 A--FRTIRSNPP 133


>gi|323140329|ref|ZP_08075261.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322415187|gb|EFY05974.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 242

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+    + P + ++   ++L+LG GTGA+ + LL+     +   +D + +   + + + 
Sbjct: 31  TDAIFLGNFPHVVRK--AKVLELGCGTGAISM-LLESRGAAEVTALDCNPQVTRLVRQSV 87

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLG 184
             N + ++F  +  D  +  + L     D++ SNPPY  S  V  +G
Sbjct: 88  ADNSLQDKFTVIDGDLRNYKQLLQPESMDLVASNPPYRNSGNVRQVG 134


>gi|268323315|emb|CBH36903.1| conserved hypothetical protein, methyltransferase domain family
           [uncultured archaeon]
          Length = 253

 Score = 36.6 bits (83), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + ILD+GTGTG   LALL      K  G+DIS   LE ++ NA    ++  F    ++  
Sbjct: 52  LNILDVGTGTG--FLALLFAELGHKVTGIDISKSMLEKSRCNAYKQKLAVNFMHGDAENL 109

Query: 159 SSVEGLFDVIVS 170
              +G FD++++
Sbjct: 110 PFDDGSFDIVMN 121


>gi|328863963|gb|EGG13062.1| hypothetical protein MELLADRAFT_32299 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 24/180 (13%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVG 126
           D +EP  +T +L+D AL   L  ++    +  +++G+G+G V +    +L   P    + 
Sbjct: 17  DVYEPAEDTFILLD-ALEADLDFLKALKPLICVEIGSGSGCVSVFAQKILSGIPTLH-IC 74

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
            DI+ KAL +  S    N +S   + +++   +S+  +   D+++ NPPY+E+       
Sbjct: 75  TDINSKALTVTDSTFQKNSLSTP-NLVRTSLLNSLRLQSSVDLLLFNPPYVET------- 126

Query: 185 LEVRDFDP------RISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVV 236
               +F+         S  GG +G+     + D +   L  N+  L  V I  N+  ++V
Sbjct: 127 -STEEFEQATQGHIEASWAGGANGMELTNQLLDSLPSILSPNRGVLYLVAIKQNKPEEIV 185


>gi|224143306|ref|XP_002324910.1| predicted protein [Populus trichocarpa]
 gi|222866344|gb|EEF03475.1| predicted protein [Populus trichocarpa]
          Length = 386

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 14/150 (9%)

Query: 35  RFFLTNAIVR--SLKHESIHRILGWRDFYNVRLT----LSSDTFEPRPETE-LLVDSALA 87
           +F+L  +I+R  SL+         + D Y  R T       D F  + + + LL +  + 
Sbjct: 12  QFYLIQSILRQNSLRQLRTKPTHHYNDKYRTRNTKEDKQQDDLFLYKSKGQHLLTNQRIL 71

Query: 88  FSLPR---IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            S+ R   I   D V  L++G GTG + L LL  +   K V V+I  + + +       +
Sbjct: 72  DSIVRKSSINPTDTV--LEIGPGTGNLTLKLLDVAS--KVVAVEIDKRMVGVLNKRVKEH 127

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G  ++   ++ D   +    FD++V+N PY
Sbjct: 128 GFEDKLSVIREDALKAEFPKFDLVVANIPY 157


>gi|152991152|ref|YP_001356874.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2]
 gi|166223425|sp|A6Q4V8|PRMA_NITSB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|151423013|dbj|BAF70517.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2]
          Length = 280

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 30/145 (20%)

Query: 72  FEPRP-ETELLVDSALAFS----------LPRIEK--RDVVRILDLGTGTGAVCLALLKE 118
           +EP+  +T + +D ALAF           L  I+K  +  + +LD+G G+G + +A  K 
Sbjct: 105 YEPKEGKTNIKIDPALAFGSGHHETTRGCLNAIQKYVQPGMELLDVGCGSGILSIAAAK- 163

Query: 119 SPFFKGVGVDI---SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               KG  VDI      ALE ++ N   NGV  R   + S   ++ +  +D++++N    
Sbjct: 164 ----KGAVVDICDTDALALEESQKNFSLNGVEFREGWVGS--AANAKKKYDIVIAN---- 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGI 200
             ++ D L +  +D     + +GGI
Sbjct: 214 --IVADVLIMIAKDL-QETTKEGGI 235


>gi|148269384|ref|YP_001243844.1| methyltransferase type 11 [Thermotoga petrophila RKU-1]
 gi|147734928|gb|ABQ46268.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1]
          Length = 216

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGV----DISCKALEIAKSNAVTNGVS---E 148
           +DV  +L+LG+G G V  AL K     + VGV    ++  KALE    N +   VS    
Sbjct: 37  KDVRNVLELGSGVGTVSFALAKLY-NVQVVGVEKEKELYEKALEGISLNKLEGKVSFVNS 95

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             + L   W S     FD++VSNPP+
Sbjct: 96  SVEELPFPWES-----FDMVVSNPPH 116


>gi|113460711|ref|YP_718777.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 129PT]
 gi|122945185|sp|Q0I1Y6|PRMA_HAES1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|112822754|gb|ABI24843.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Haemophilus somnus 129PT]
          Length = 296

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  + +NA  NGV+ER     S+    
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASYNNAEQNGVAERLQLFLSE-EKP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+++N
Sbjct: 220 TDLQADVVIAN 230


>gi|312278880|gb|ADQ63537.1| DNA methyltransferase signature protein [Streptococcus thermophilus
           ND03]
          Length = 254

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139
           +DS L    P+I K+ +  I+DL +G GAV L  +   E+P    + V++  +  ++AK 
Sbjct: 33  IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---ILVELQERLADMAKR 87

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           +   N + ++   +  D  + ++       D+I+ NPPY ++ 
Sbjct: 88  SVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130


>gi|307354695|ref|YP_003895746.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307157928|gb|ADN37308.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
          Length = 288

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +  R+LD+G G GA+ + L +         +DIS K LE  K NA   G+S     ++
Sbjct: 66  KPEGARVLDIGCGPGALAIPLARAGADV--TAIDISSKTLEYLKDNAEKEGLS--VHPVK 121

Query: 155 SDWFSS------VEGLFDVIVSN 171
             W+++          FD+++S+
Sbjct: 122 CHWWTADIDELGFRDQFDLVISS 144


>gi|307352202|ref|YP_003893253.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307155435|gb|ADN34815.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
          Length = 188

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +L+ G GTGA    + K SP    + VDIS K+LE+AK+     G +  +  L  D F
Sbjct: 41  VLEAGCGTGAQTPVITKNSPGAVIISVDISQKSLEVAKNRTTAEGRAGEY--LNCDIF 96


>gi|312115804|ref|YP_004013400.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
 gi|311220933|gb|ADP72301.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
          Length = 307

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 17/175 (9%)

Query: 11  LCRVTGLSSHQVIVD---PDSVLDDRQR--FFLTNAIVRSLKHESIHRILGWRDFYNVR- 64
           + +V G +SH  +       S LD R R       A+  +L + S H +L        + 
Sbjct: 1   MDQVLGQASHNPVAAGGASPSALDRRARPQSGFRKALRSTLHYLSYHFVLNHEGTQRAKA 60

Query: 65  ----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               L +    F PR     +     A  +  ++ R  V + D+GTG+G + LA  +   
Sbjct: 61  AGFMLEVPPTVFHPR---YFISSETFAHFIDGLDLRGKV-VADIGTGSGILALAAARAGA 116

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
            F  + +DI+  A + A  NA TNG       L S+   ++    +FDVI S+PP
Sbjct: 117 DFV-LALDINPNAADAAVQNAETNGYGPNVKGLCSNLMDAIPARPIFDVIFSSPP 170


>gi|327481990|gb|AEA85300.1| ribosomal protein L11 methyltransferase [Pseudomonas stutzeri DSM
           4166]
          Length = 293

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%)

Query: 74  PRPET-ELLVDSALAF---SLPRI---------EKRDVVRILDLGTGTGAVCLALLKESP 120
           P P+   LL+D  LAF   + P           +  D   +LD G G+G + +A L    
Sbjct: 121 PEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDAQTLDDRSLLDFGCGSGILAIAGLLLG- 179

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-ERF 150
             + VG DI  +ALE ++ NA  NG++ ERF
Sbjct: 180 AHQAVGTDIDPQALEASRDNAERNGIAPERF 210


>gi|320590842|gb|EFX03285.1| methyltransferase type 12 [Grosmannia clavigera kw1407]
          Length = 434

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F L  I   +   ILD+GTGTG   + + +  P  + VGVDIS       +  AV + V 
Sbjct: 154 FELTSIRLHNPRYILDVGTGTGEWAIGMGEAYPHCEVVGVDISA-----IQPTAVPHNVF 208

Query: 148 ERFDTLQSDWF 158
              D  + DW 
Sbjct: 209 FEVDDCEIDWM 219


>gi|294461690|gb|ADE76404.1| unknown [Picea sitchensis]
          Length = 390

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+   +L++G GTG + L LL+ +   + + V+I  + +E          +++R + ++ 
Sbjct: 96  RETDTVLEIGPGTGNLTLELLQAA--RRVIAVEIDPRMIEAVHKRVQGTEMAQRLELVRG 153

Query: 156 DWFSSVEGLFDVIVSNPPY 174
           D   +    FD+ V+N PY
Sbjct: 154 DILRTDLPSFDICVANIPY 172


>gi|221639995|ref|YP_002526257.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|221160776|gb|ACM01756.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides KD131]
          Length = 291

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  F 
Sbjct: 151 KVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLEGRVACLEAAGFD 210

Query: 160 SVE----GLFDVIVSN 171
             E      FD++ +N
Sbjct: 211 HPEIAAAAPFDLVFAN 226


>gi|125600382|gb|EAZ39958.1| hypothetical protein OsJ_24395 [Oryza sativa Japonica Group]
          Length = 358

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL ESP  +   V+I  + ++   +     G++ +   +++D   +
Sbjct: 67  VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 125

Query: 161 VEGLFDVIVSNPPY 174
               FDV V+N PY
Sbjct: 126 EFPEFDVCVANIPY 139


>gi|147921607|ref|YP_684576.1| N6 adenine-specific DNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|110619972|emb|CAJ35250.1| predicted N6 adenine-specific DNA methyltransferase [uncultured
           methanogenic archaeon RC-I]
          Length = 225

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 29/96 (30%)

Query: 101 ILDLGTGTG--AVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++DLG GTG  A+   LLK+        K +G+D   +ALE+AK+NA + G         
Sbjct: 50  VIDLGCGTGILAIGARLLKDDAGMDSTQKVIGIDSDIRALEVAKANAESLGT-------D 102

Query: 155 SDWFS----------------SVEGLFDVIVSNPPY 174
            DW                  +    FD +V NPP+
Sbjct: 103 VDWVHCDVRDVNNIPEIAVVLNAGSRFDTVVMNPPF 138


>gi|55377789|ref|YP_135639.1| protein-L-isoaspartate O-methyltransferase [Haloarcula marismortui
           ATCC 43049]
 gi|55230514|gb|AAV45933.1| protein-L-isoaspartate O-methyltransferase [Haloarcula marismortui
           ATCC 43049]
          Length = 204

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           E  DVV  LDLGTGTGA+  AL  ++     +G DIS   LE A+  A   GV
Sbjct: 42  ESDDVV--LDLGTGTGAIAFALASDAAEI--IGRDISDGMLEKAREKADGRGV 90


>gi|146277274|ref|YP_001167433.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555515|gb|ABP70128.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 291

 Score = 36.6 bits (83), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G GT  + +A     P    +  DI   A+E+A++N   NG+  R   L++  F 
Sbjct: 151 KVADVGCGTAVLAMAAASVFPEALVIASDIDEVAVEVAEANVAINGLGGRVTCLEAAGFD 210

Query: 160 ----SVEGLFDVIVSN 171
               + E  FD++ +N
Sbjct: 211 HPRLAAEAPFDLVFAN 226


>gi|292659116|gb|ADE34498.1| SsfM2 [Streptomyces sp. SF2575]
          Length = 331

 Score = 36.6 bits (83), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  ++D+G G G +  ALLK  P  KG  VD     +E AK      GV++R  T    +
Sbjct: 165 VKHVVDVGGGNGTLLAALLKGRPHLKGTVVD-RPHPIEGAKRKLAAEGVADRASTSAQSF 223

Query: 158 FSSVEGLFDV 167
           F  +    DV
Sbjct: 224 FDPLPKGGDV 233


>gi|317055875|ref|YP_004104342.1| type 11 methyltransferase [Ruminococcus albus 7]
 gi|315448144|gb|ADU21708.1| Methyltransferase type 11 [Ruminococcus albus 7]
          Length = 436

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           L  IEK     +LD G GTG +   L ++ P  +  G+D++ K +EIAK   +
Sbjct: 40  LAEIEKEPFNDLLDCGCGTGPMLTLLHRKYPDKRYTGIDLTPKMIEIAKRKKM 92


>gi|304394132|ref|ZP_07376055.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130]
 gi|303293572|gb|EFL87949.1| 3-demethylubiquinone-9 3-O-methyltransferase [Ahrensia sp. R2A130]
          Length = 255

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+G G G +C  L +     + VG D     +E+AK +A  +GVS  +    ++  
Sbjct: 73  LRILDIGCGGGLLCEPLARMGA--EVVGADAGETNIEVAKLHAAQSGVSVDYRATTAEAL 130

Query: 159 SSVEGLFDVIVS 170
           ++    FDV+++
Sbjct: 131 AASGETFDVVLN 142


>gi|222480516|ref|YP_002566753.1| methylase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453418|gb|ACM57683.1| methylase [Halorubrum lacusprofundi ATCC 49239]
          Length = 199

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 17/142 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L++GTG+G V   + +E      VG D++  A   A+   V   V++     ++D   
Sbjct: 44  RVLEVGTGSGWVAQQIAEER-GLDTVGSDLNPHAARQARERGVEGVVADLLSPYRAD--- 99

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                FD +  NPPY+ +   +  G  +       +L GG  G        D V R L  
Sbjct: 100 ----AFDTVCFNPPYLPTDPDNEWGDWMEH-----ALSGGESGRELIEPFLDDVGRVLAP 150

Query: 220 DG----LCSVEIGYNQKVDVVR 237
            G    L S   GY++ + +V 
Sbjct: 151 GGVVLLLVSSLTGYDEVLALVE 172


>gi|327470556|gb|EGF16012.1| glycerophosphoryl diester phosphodiesterase [Streptococcus
           sanguinis SK330]
          Length = 326

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 11/107 (10%)

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199
           G+++ FD  ++DW S+   + D  +   PY+E+ I        LG +  +FD ++S D  
Sbjct: 44  GLAQTFDESKADWESNTAAMIDPPMH--PYLENTISSMQAAFDLGADAVEFDVKLSKDKQ 101

Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +    D    ++T  +G  +      L  ++IGY    D  + +  R
Sbjct: 102 LAVFHDATLEFKTGIEGEIQDYTMAELKKMDIGYGYTADGGKTYPFR 148


>gi|223039768|ref|ZP_03610053.1| methyltransferase small domain family [Campylobacter rectus RM3267]
 gi|222878960|gb|EEF14056.1| methyltransferase small domain family [Campylobacter rectus RM3267]
          Length = 231

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + L L ++ P      +DI    + +A +NA  NG+   F T     F S
Sbjct: 32  VLDVGCGSGVLGLLLKRDFPKISLSLLDILEANVNLAAANASQNGLEAEFITADFAKFKS 91

Query: 161 VEGLFDVIVSNPPY 174
            E  FD+IVSNPP+
Sbjct: 92  -EKRFDLIVSNPPF 104


>gi|148377836|ref|YP_001256712.1| modification (methylase) protein of type irestriction-modification
           system HsdM [Mycoplasma agalactiae PG2]
 gi|148291882|emb|CAL59273.1| Modification (Methylase) protein of type Irestriction modification
           system HsdM [Mycoplasma agalactiae PG2]
          Length = 892

 Score = 36.2 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 26/122 (21%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTNG 145
           ++ R V+++ D  +G+G++ L + +E   +      +S  A E+        + N +   
Sbjct: 231 LKDRKVIKVYDPTSGSGSLLLTIGQEFKKYNSGNSPVSYYAQELKAEVFNLTRMNLIMKN 290

Query: 146 VS------ERFDTLQSDW-------FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +S         DTL+ DW       +SS + L  D +VSNPPY +         E    D
Sbjct: 291 ISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVDAVVSNPPYSQK-----WNAEKHTLD 345

Query: 192 PR 193
           PR
Sbjct: 346 PR 347


>gi|305666421|ref|YP_003862708.1| putative RNA methyltransferase [Maribacter sp. HTCC2170]
 gi|88708684|gb|EAR00919.1| putative RNA methyltransferase [Maribacter sp. HTCC2170]
          Length = 469

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-------VSERFDTL 153
           + DL TGTG +   + K++   K +G++   +A+E AK+NA  N        V +  +  
Sbjct: 326 VYDLYTGTGTIAQFVSKKAK--KVIGIESVPEAIEDAKANAANNKIDNVDFFVGDMKNVF 383

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D F +  G  D+I+++PP
Sbjct: 384 NED-FINAHGSPDIIITDPP 402


>gi|170717872|ref|YP_001784928.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 2336]
 gi|189037697|sp|B0UV84|PRMA_HAES2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|168826001|gb|ACA31372.1| ribosomal protein L11 methyltransferase [Haemophilus somnus 2336]
          Length = 296

 Score = 36.2 bits (82), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  + +NA  NGV+ER     S+    
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASYNNAEQNGVAERLQLFLSE-EKP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+++N
Sbjct: 220 TDLQADVVIAN 230


>gi|65317304|ref|ZP_00390263.1| COG2890: Methylase of polypeptide chain release factors [Bacillus
           anthracis str. A2012]
          Length = 81

 Score = 36.2 bits (82), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 15/83 (18%)

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV       K  L
Sbjct: 2   VKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDV-------KGLL 54

Query: 247 VNAFK--------DYGGNDRVLL 261
             AF         D  G DR++ 
Sbjct: 55  QQAFPHAHVEVVFDINGKDRMVF 77


>gi|330887823|gb|EGH20484.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 232

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++   
Sbjct: 76  LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTL 135

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +   L  D   +     + I+SNPP+   V  D +  E
Sbjct: 136 AANGLQAQ--VLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 178


>gi|323340759|ref|ZP_08081011.1| type I restriction-modification system DNA-methyltransferase
           [Lactobacillus ruminis ATCC 25644]
 gi|323091882|gb|EFZ34502.1| type I restriction-modification system DNA-methyltransferase
           [Lactobacillus ruminis ATCC 25644]
          Length = 556

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 34/157 (21%)

Query: 47  KHESIHRILGWRDFYNVRLT--------LSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
           K E+ H ILG  D Y   +            + F P   + +L     A   P IE  +V
Sbjct: 174 KDEAGHDILG--DIYEYLIAEFAGNAGKKGGEFFTPHQVSLVLAKIIAANMDPEIEHPEV 231

Query: 99  VRILDLGTGTGAVCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERF 150
               D   G+G++ L +  E            +  G +++     +A+ N + +GV  + 
Sbjct: 232 Y---DFACGSGSLLLTVEDELQIPGSQKRRRVRYYGQELNTTNYNMARMNLMMHGVDYQM 288

Query: 151 ------DTLQSDWFSSVEG-------LFDVIVSNPPY 174
                 DTL++DW   V          FD +V+NPPY
Sbjct: 289 MDLRNADTLENDWPDGVGNDNIDHPHFFDAVVANPPY 325


>gi|218893724|ref|YP_002442593.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa LESB58]
 gi|226712962|sp|B7V0H2|RSMC_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218773952|emb|CAW29766.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa LESB58]
          Length = 332

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G G +  AL +  P  +   +D+   A+E ++     NG+    + + +D    
Sbjct: 195 LLDFGCGAGVLGAALKRRYPASRLTLLDVDAFAVESSRLTLAANGLDG--EVIAADGIDG 252

Query: 161 VEGLFDVIVSNPPYIESVIVD 181
                  IVSNPP+ + V  D
Sbjct: 253 APRELAAIVSNPPFHQGVHTD 273


>gi|218440731|ref|YP_002379060.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
 gi|218173459|gb|ACK72192.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
          Length = 440

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           ILD+  GTG   L L + +P  K +GVDIS +++++A+     +G +E
Sbjct: 57  ILDVACGTGFTTLCLAEANPGAKIIGVDISEESVKLARERLSYHGFNE 104


>gi|104773938|ref|YP_618918.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|123251925|sp|Q1GAH2|PRMA_LACDA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|103423019|emb|CAI97705.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|325125608|gb|ADY84938.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 314

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + + D+GTG+G + +A  K     K V   DIS +++  A+ NA  NG+ +     ++  
Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIHD-IALQKTSL 234

Query: 158 FSSVEGLFDVIVSN 171
            + V+G FD+IV+N
Sbjct: 235 LADVDGKFDLIVAN 248


>gi|15602953|ref|NP_246025.1| ribosomal protein L11 methyltransferase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|38605464|sp|Q9CLW2|PRMA_PASMU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|12721427|gb|AAK03172.1| PrmA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 293

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     S+    
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSE-DKP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 ADLKADVVVAN 230


>gi|328544944|ref|YP_004305053.1| methyltransferase type 11 [polymorphum gilvum SL003B-26A1]
 gi|326414686|gb|ADZ71749.1| Methyltransferase type 11 [Polymorphum gilvum SL003B-26A1]
          Length = 224

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 33/60 (55%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           + R++  D   +L+LG GTG   +A  +  P     G+DIS + L+ A +N    G+++R
Sbjct: 37  IARLDPGDGDTVLELGCGTGRNLIAAARRYPRTLFYGIDISSEMLDTAAANVARAGLADR 96


>gi|325680739|ref|ZP_08160277.1| hypothetical protein CUS_7776 [Ruminococcus albus 8]
 gi|324107519|gb|EGC01797.1| hypothetical protein CUS_7776 [Ruminococcus albus 8]
          Length = 371

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           FK  G DI   A+E+++ NA   GV  +    Q D    V+    +   NPPY E +   
Sbjct: 253 FKAFGFDIDDIAVELSRDNAKKAGVGSKITVKQQDISKFVQPEECITFCNPPYGERL--- 309

Query: 182 CLGLEVRD 189
              LE+RD
Sbjct: 310 ---LEIRD 314


>gi|237747592|ref|ZP_04578072.1| ubiquinone biosynthesis O-methyltransferase [Oxalobacter formigenes
           OXCC13]
 gi|229378954|gb|EEO29045.1| ubiquinone biosynthesis O-methyltransferase [Oxalobacter formigenes
           OXCC13]
          Length = 231

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E RDV   LD+G G G +  +L KE       G+D++  A+E A+S+++ + +S R+  
Sbjct: 45  LENRDV---LDIGCGGGILSESLAKEKAIV--TGIDLASNAIETARSHSIESNLSIRYLI 99

Query: 153 LQSDWFSSVE-GLFDVIV 169
             ++  + +E   +DV+ 
Sbjct: 100 SSAEELADMEPAKYDVVT 117


>gi|190346296|gb|EDK38346.2| hypothetical protein PGUG_02444 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 223

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 31/179 (17%)

Query: 66  TLSSDTFEPRPETELLVD----------SALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           TL  + +EP  ++ LL+D          S L  S+P +         ++G G+G V +A 
Sbjct: 9   TLDLNVYEPAEDSFLLLDCLEQDQHYLKSHLNTSVPIVS--------EIGAGSGIV-IAF 59

Query: 116 LKESPFFKGVGVDI-----SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           +K   +  G+ +       +C+A+ +A     + GV   +D  Q D  +++     D++V
Sbjct: 60  IKRHLYPWGIYIPTDVNPHACQAV-LATLKKNSGGVPSIYDVCQMDCTTAIRSQCLDLLV 118

Query: 170 SNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            NPPY+ +  V      + D    D  ++L GG DG+     +   +S  L  +G+  +
Sbjct: 119 FNPPYVPAEAVPATPNTLDDETWLD--LALLGGDDGMEVTWRVLKNLSSILAPNGIAYI 175


>gi|218780743|ref|YP_002432061.1| ribosomal protein L11 methyltransferase [Desulfatibacillum
           alkenivorans AK-01]
 gi|226710071|sp|B8FBE9|PRMA_DESAA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|218762127|gb|ACL04593.1| ribosomal protein L11 methyltransferase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 310

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 25/167 (14%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP------RPETELLV 82
            LDD +   LT+  V   K +       W+  ++      S   +P       PE  +L+
Sbjct: 81  ALDDLKGSVLTDYSVHFSKQDDQPWETAWKAHFHPIEIGESLVIKPSWEDYENPEKRMLI 140

Query: 83  --DSALAFS----------LPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
             D  +AF           L  IE    K+   R LD+GTG+G + +   K     K  G
Sbjct: 141 ELDPGMAFGTGTHPTTAVCLEMIETECLKKAPERFLDVGTGSGILMIGAYKLGA-RKVFG 199

Query: 127 VDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSS-VEGLFDVIVSN 171
            D    ALE A  N   N V E  F     D  +  VEG FD++ +N
Sbjct: 200 CDNDMDALEAAAKNLKGNQVHEGDFGLWLGDLLAGIVEGAFDMVAAN 246


>gi|159037065|ref|YP_001536318.1| methyltransferase small [Salinispora arenicola CNS-205]
 gi|157915900|gb|ABV97327.1| methyltransferase small [Salinispora arenicola CNS-205]
          Length = 494

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L L   +   +    D+S +AL  A + A  NG  + ++ L+
Sbjct: 153 RRPVETALDLGTGSGVQALHLSTHA--RRVTATDLSERALRFAATAAALNG--QDWELLR 208

Query: 155 SDWFSSVEGL-FDVIVSNPPYI 175
            D  + V G  FD++VSNPP++
Sbjct: 209 GDLTAPVAGRRFDLVVSNPPFV 230


>gi|315178394|gb|ADT85308.1| ribosomal protein L11 methyltransferase [Vibrio furnissii NCTC
           11218]
          Length = 295

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV +  +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNASRNGVEDLIEVYLPKD--- 218

Query: 160 SVEGLF-DVIVSN 171
             EGL  DV+V+N
Sbjct: 219 QPEGLVADVVVAN 231


>gi|330947951|ref|XP_003307015.1| hypothetical protein PTT_20336 [Pyrenophora teres f. teres 0-1]
 gi|311315194|gb|EFQ84902.1| hypothetical protein PTT_20336 [Pyrenophora teres f. teres 0-1]
          Length = 366

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG   +    E P  + +G D+S       +   V   V    D  +S+W  
Sbjct: 132 RVLDIGTGTGIWAIDFADEHPGAEVIGTDLSP-----IQPTWVPPNVKFYIDDAESEWVY 186

Query: 160 SVEGLFDVI 168
           S +  FD I
Sbjct: 187 SPDEAFDFI 195


>gi|291320525|ref|YP_003515789.1| type I restriction modification system modification (methylase)
           protein [Mycoplasma agalactiae]
 gi|290752860|emb|CBH40835.1| Modification (Methylase) protein of type Irestriction modification
           system [Mycoplasma agalactiae]
          Length = 892

 Score = 36.2 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 30/147 (20%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P   +EL+    +A+ L   + R+ +++ D  +G+G++ L + +E   +     
Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREFIKVYDPTSGSGSLLLTIGQEFKKYNSGNS 265

Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166
            +S  A E+        + N +   +S         DTL+ DW       +SS + L  D
Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVD 325

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +VSNPPY ++        E    DPR
Sbjct: 326 AVVSNPPYSQN-----WNAEKHTLDPR 347


>gi|261493016|ref|ZP_05989558.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495164|ref|ZP_05991627.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309140|gb|EEY10380.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311360|gb|EEY12521.1| ribosomal protein L11 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 293

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  +++NA  NGV+E+    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQPR 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 ELQA--DVVVAN 230


>gi|226311619|ref|YP_002771513.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC
           100599]
 gi|254782831|sp|C0ZB50|PRMA_BREBN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226094567|dbj|BAH43009.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC
           100599]
          Length = 313

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 24/138 (17%)

Query: 56  GWRDFYNV-----RLTLSS--DTFEPRPETELLV--DSALAFS----------LPRIEKR 96
            W+ +Y       R+T+    + + P+   E+++  D  +AF           L  +EK 
Sbjct: 114 AWKKYYKPVHVSDRMTIKPVWEEYVPKHPDEIIIEMDPGMAFGTGTHPTTILCLRALEKY 173

Query: 97  DVV--RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTL 153
                ++ D+GTGT  + +A +K     K V  +D+   A+  A++N   NGV E  +  
Sbjct: 174 MAKGDQVYDVGTGTAILSIAAIKLGA--KDVLAMDLDEVAVRSAQANTELNGVHEHINVR 231

Query: 154 QSDWFSSVEGLFDVIVSN 171
           Q++    +E   +V+V+N
Sbjct: 232 QNNLLDGIEEQVEVVVAN 249


>gi|170782229|ref|YP_001710562.1| putative methyltransferase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156798|emb|CAQ01962.1| putative methyltransferase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 284

 Score = 36.2 bits (82), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++DLG GTG   +AL +     +   VD S   L+     AV +G+++R  T+Q+D
Sbjct: 48  VVDLGAGTGTGTVALARSFGRAEVHAVDASAAMLDRVAERAVVDGLADRIRTVQAD 103


>gi|148377828|ref|YP_001256704.1| modification (methylase) protein of type irestriction-modification
           system [Mycoplasma agalactiae PG2]
 gi|148291874|emb|CAL59265.1| Modification (Methylase) protein of type Irestriction modification
           system [Mycoplasma agalactiae PG2]
          Length = 892

 Score = 36.2 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 30/147 (20%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P   +EL+    +A+ L   + R+ +++ D  +G+G++ L + +E   +     
Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREFIKVYDPTSGSGSLLLTIGQEFKKYNSGNS 265

Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166
            +S  A E+        + N +   +S         DTL+ DW       +SS + L  D
Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDYSSYQHLSVD 325

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +VSNPPY ++        E    DPR
Sbjct: 326 AVVSNPPYSQN-----WNAEKHTLDPR 347


>gi|269121536|ref|YP_003309713.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268615414|gb|ACZ09782.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 222

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157
           +LD+G G G + L LL  +   +   V+I   + +  + N   N +S++   + T  +D+
Sbjct: 49  LLDIGAGNGILPL-LLCNANLTEISAVEIQKNSFDCLEKNIDLNSLSDKIIPYHTDINDF 107

Query: 158 FSSVEGLFDVIVSNPPY 174
           F   E  FD I+SNPPY
Sbjct: 108 FPDFE--FDYIISNPPY 122


>gi|1303810|dbj|BAA12466.1| YqeT [Bacillus subtilis]
 gi|1890059|dbj|BAA12078.1| YqeT [Bacillus subtilis]
          Length = 311

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 100 RILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +++D+GTG+G  ++  A+L+          D+   A+E A+ N   N VS+     Q++ 
Sbjct: 178 KVIDVGTGSGILSIAAAMLEAESVH---AYDLDPVAVESARLNLKLNKVSDIAQVKQNNL 234

Query: 158 FSSVEGLFDVIVSN 171
              +EG  DVIV+N
Sbjct: 235 LDGIEGEHDVIVAN 248


>gi|257051330|ref|YP_003129163.1| methyltransferase [Halorhabdus utahensis DSM 12940]
 gi|256690093|gb|ACV10430.1| methyltransferase [Halorhabdus utahensis DSM 12940]
          Length = 326

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 79  ELLVDSALAFSLPRI--EKRDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E ++D A  +  PR+  E+  VV       +  D+  G G   + + KE      VGVD+
Sbjct: 147 EFVLDLAAVYFSPRLATERHRVVEQVGAGEQAFDMFAGVGPFVIPMAKEG--ATCVGVDV 204

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPY 174
           +  A+E  + NA  N V++R   ++ D   +V       D IV N P+
Sbjct: 205 NPDAIEYLRENARRNDVADRITAIEGDVRETVPAHADWADRIVMNLPH 252


>gi|121712078|ref|XP_001273654.1| UbiE/COQ5 family methyltransferase, putative [Aspergillus clavatus
           NRRL 1]
 gi|119401806|gb|EAW12228.1| UbiE/COQ5 family methyltransferase, putative [Aspergillus clavatus
           NRRL 1]
          Length = 276

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 10/89 (11%)

Query: 96  RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R+   ++DLG+G G  V LA  K  P  K +GVD++ K L +A+ N    G+S       
Sbjct: 67  REGETVVDLGSGGGIDVILAARKVGPKGKAIGVDMTEKMLTLARENVEKAGISNA----- 121

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               S VEG    I       + +I +C+
Sbjct: 122 ----SFVEGFITAIPLEDSTADCIISNCV 146


>gi|315179199|gb|ADT86113.1| 16S RNA G1207 methylase RsmC [Vibrio furnissii NCTC 11218]
          Length = 340

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +    P       DIS  A+  ++     NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGGVMAMLYPNIALEMCDISALAIRSSQETLAANGLSGR--VFASDVYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  IV+NPP+
Sbjct: 261 DTASDYQFIVTNPPF 275


>gi|309803859|ref|ZP_07697944.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 11V1-d]
 gi|308164093|gb|EFO66355.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 11V1-d]
          Length = 450

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTADDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           V+       + + L   W +  EGL  DVI  +PP
Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|237809272|ref|YP_002893712.1| 50S ribosomal protein L11 methyltransferase [Tolumonas auensis DSM
           9187]
 gi|259534600|sp|C4LAF1|PRMA_TOLAT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|237501533|gb|ACQ94126.1| ribosomal protein L11 methyltransferase [Tolumonas auensis DSM
           9187]
          Length = 292

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+E ++ NA  NGVS++ +  L  D   
Sbjct: 160 LVDFGCGSGILAIAALKLG-AERVIGIDIDPQAIEASRDNAQRNGVSDQLELYLPEDQPK 218

Query: 160 SVEGLFDVIVSN 171
           + +   D++V+N
Sbjct: 219 NFQA--DIVVAN 228


>gi|220912236|ref|YP_002487545.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
 gi|219859114|gb|ACL39456.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
          Length = 207

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L +  ++P  +   VD++ + + +   NA   G+S    +       +
Sbjct: 63  LLDIGCGWGPIALTMALKAPHAQVYAVDVNERCIALTNGNAAALGLSNVAASTPDAVDPA 122

Query: 161 VEGLFDVIVSNPP 173
           V+  FD I SNPP
Sbjct: 123 VQ--FDTIWSNPP 133


>gi|170724872|ref|YP_001758898.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|226710114|sp|B1KQE8|PRMA_SHEWM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169810219|gb|ACA84803.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 293

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           D   ++D G G+G + +A LK     K  G+DI  +A++ +K+NA  NGV ++ 
Sbjct: 158 DNKEVIDFGCGSGILAVAALKLGAT-KVTGIDIDYQAIDASKANAERNGVEDQL 210


>gi|110635331|ref|YP_675539.1| 3-demethylubiquinone-9 3-methyltransferase [Mesorhizobium sp. BNC1]
 gi|123353220|sp|Q11E01|UBIG_MESSB RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|110286315|gb|ABG64374.1| 3-demethylubiquinone-9 3-methyltransferase [Chelativorans sp. BNC1]
          Length = 253

 Score = 36.2 bits (82), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 3/81 (3%)

Query: 91  PRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           PR  K  + +RILD+G G G +C  + +       VG D S   +E+A+ +A+ +GVS  
Sbjct: 57  PRAAKPFEGLRILDIGCGGGLLCEPMARLGASV--VGADASATNIEVARLHALESGVSID 114

Query: 150 FDTLQSDWFSSVEGLFDVIVS 170
           +    ++  +     FD+I++
Sbjct: 115 YRAETAEALADQGEKFDIILN 135


>gi|213965465|ref|ZP_03393660.1| putative transferase [Corynebacterium amycolatum SK46]
 gi|213951849|gb|EEB63236.1| putative transferase [Corynebacterium amycolatum SK46]
          Length = 227

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFD 151
            R+LDLG GTG +   L  E  + +   VG D+S  A+ IA+  A   G+  R +
Sbjct: 55  ARVLDLGCGTGWLARMLAAEPRYRRANIVGYDLSPNAIRIARERAAVEGLGARTE 109


>gi|189188670|ref|XP_001930674.1| methyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187972280|gb|EDU39779.1| methyltransferase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 370

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 5/69 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+GTGTG   +    E P  + +G D+S       +   V   V    D  +S+W  
Sbjct: 136 RVLDIGTGTGIWAIDFADEHPGAEVIGTDLSP-----IQPTWVPPNVKFYIDDAESEWVY 190

Query: 160 SVEGLFDVI 168
           S +  FD I
Sbjct: 191 SPDEAFDFI 199


>gi|168703411|ref|ZP_02735688.1| hypothetical protein GobsU_28016 [Gemmata obscuriglobus UQM 2246]
          Length = 249

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 2/44 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           R+LDLG GTG +C+   ++   F  VGVD+S + L  A++NA +
Sbjct: 54  RLLDLGCGTGRLCVHFARKG--FDCVGVDLSEEMLAKARANAAS 95


>gi|115472299|ref|NP_001059748.1| Os07g0509600 [Oryza sativa Japonica Group]
 gi|113611284|dbj|BAF21662.1| Os07g0509600 [Oryza sativa Japonica Group]
          Length = 347

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G GTG + + LL ESP  +   V+I  + ++   +     G++ +   +++D   +
Sbjct: 56  VLEVGPGTGNLTVRLL-ESPAARVSAVEIDPRMVDAVTARVDALGLAHKLTVIRADAVEA 114

Query: 161 VEGLFDVIVSNPPY 174
               FDV V+N PY
Sbjct: 115 EFPEFDVCVANIPY 128


>gi|292655627|ref|YP_003535524.1| putative DNA methylase [Haloferax volcanii DS2]
 gi|291370592|gb|ADE02819.1| predicted DNA methylase [Haloferax volcanii DS2]
          Length = 208

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG+GTG + L     SP  + VGV++   AL  A  NA   G S   D +++D    
Sbjct: 52  VLDLGSGTGMLGLGAALRSP-ARVVGVELDDDALATATDNARRVGASAPIDWIRADATRL 110

Query: 161 VEGLFD----VIVSNPPY 174
              L D     ++ NPP+
Sbjct: 111 PLCLPDDRQVTVLMNPPF 128


>gi|226355221|ref|YP_002784961.1| N6-adenine-specific DNA methylase; RNA methylase [Deinococcus
           deserti VCD115]
 gi|226317211|gb|ACO45207.1| putative N6-adenine-specific DNA methylase; putative RNA methylase
           [Deinococcus deserti VCD115]
          Length = 364

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 82  VDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +++++A++  ++  +RD+ RI +  +G+G + +      P+   VGVDI  KA+E ++SN
Sbjct: 197 LNASIAYATHKLAGQRDIDRIFNPMSGSGTLLVERALMGPYDALVGVDIDPKAVECSRSN 256

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               G       + +         FD++V++ P+ +++
Sbjct: 257 LKAAGREVEVAMVDALHTGLPARSFDLVVADLPWGDAI 294


>gi|220912882|ref|YP_002488191.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
 gi|219859760|gb|ACL40102.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
          Length = 418

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG GTG +     +  P  K    D S  A+  A + A  NG+  R   LQ D  S++
Sbjct: 276 VDLGCGTGILAAMYARTYPEAKVTATDQSAAAVASALATARANGLDGRISALQDDALSTM 335

Query: 162 -EGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGG 199
            +   D+++ NPP+ + + +    GL++ +   R+   GG
Sbjct: 336 ADASADLVLLNPPFHVGAGVHAGAGLKLIEAAGRVLAPGG 375


>gi|194334774|ref|YP_002016634.1| Mg-protoporphyrin IX methyl transferase [Prosthecochloris aestuarii
           DSM 271]
 gi|194312592|gb|ACF46987.1| magnesium protoporphyrin O-methyltransferase [Prosthecochloris
           aestuarii DSM 271]
          Length = 233

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 13/117 (11%)

Query: 57  WRDFY-NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVC 112
           W   Y N +L+    T   R    +++D A A+    IEK ++ +   ILD G GTG   
Sbjct: 28  WASIYGNDKLSTVRSTV--RQGHAVMMDEAFAW----IEKLNLPKGATILDAGCGTGLFS 81

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           + L +    ++   VDI+ + +  AK +A   GV+   D  + +    V+G +D +V
Sbjct: 82  IRLAENG--YRVKAVDIASQMVGKAKEDATAKGVANMID-FEVNTIEEVKGQYDAVV 135


>gi|223937904|ref|ZP_03629804.1| Methyltransferase type 11 [bacterium Ellin514]
 gi|223893510|gb|EEF59971.1| Methyltransferase type 11 [bacterium Ellin514]
          Length = 389

 Score = 36.2 bits (82), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)

Query: 101 ILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +LDLG+GTG +C +A     P  + +GVD++   LE+A+ NA    V+ER 
Sbjct: 66  VLDLGSGTGKICFIAAQVVGPQGRVIGVDMTDDMLEVARRNAPV--VAERL 114


>gi|307102795|gb|EFN51062.1| hypothetical protein CHLNCDRAFT_59324 [Chlorella variabilis]
          Length = 372

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPF 121
           + T   + +EP  ++  LVD ALA       ++     L++G+G+G V   LALL     
Sbjct: 7   KTTFHREVYEPAEDSFALVD-ALAAHREAWRQQPPRMCLEVGSGSGYVITSLALL----- 60

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSS---VEGLFDVIVSNP 172
            + +GV     A +I +  A     +       R D +  D  S+   VEGL DV+V NP
Sbjct: 61  LQQLGVAAQLLATDINQQAAAATAATLAAHQVRRADIVVCDLASALPPVEGLVDVLVFNP 120

Query: 173 PYIES 177
           PY+ +
Sbjct: 121 PYVPT 125


>gi|227523212|ref|ZP_03953261.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
           8290]
 gi|227089599|gb|EEI24911.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
           8290]
          Length = 241

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDI------SCKALEIAKSNAV 142
           L + +  D   +LDLG G GAV +AL K   PF K VGVD+      S  +LE  K N  
Sbjct: 71  LAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADKSHNSLEETKRNLE 130

Query: 143 TNGVSERFDTLQSD 156
              V++  + + +D
Sbjct: 131 IAKVADHTELVTAD 144


>gi|149918120|ref|ZP_01906613.1| modification methylase HemK [Plesiocystis pacifica SIR-1]
 gi|149821125|gb|EDM80531.1| modification methylase HemK [Plesiocystis pacifica SIR-1]
          Length = 259

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 99  VRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +R+LD+G G+GAV  +A L+ +        D+S  A+  A++N   +G+ +R +   SD 
Sbjct: 84  LRVLDMGCGSGAVGVIAALRGAASVH--LADLSPDAVANARANVRRHGLEDRCEVRCSDL 141

Query: 158 FSSV-EGLFDVIVSNPPYI 175
           F++  +  FD+IV N P++
Sbjct: 142 FAAFSDERFDLIVFNVPFL 160


>gi|146308680|ref|YP_001189145.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
 gi|226712964|sp|A4XYJ7|RSMC_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145576881|gb|ABP86413.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
          Length = 331

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  ++      +LD G G G +  AL +  P  +   +D+   AL  ++   
Sbjct: 176 LDRGSALLLEHLDSLPQGHLLDFGCGAGVIGAALKRRYPSSRVSLLDVDAFALASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
             NG+    + +      S  G    IVSNPP+ + V
Sbjct: 236 ARNGLEA--ELIAGTGIESAPGELAAIVSNPPFHQGV 270


>gi|332531630|ref|ZP_08407527.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
 gi|332038993|gb|EGI75422.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
          Length = 410

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 57  WRDFYNVRLTLSSDTFEPRPET-ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           ++ + + R+  S   FE   ET E      +   L +++ R   R+LD+G G GA+ +  
Sbjct: 136 YQTWLDPRMVYSCAYFENGDETLEEAQLKKIDHILNKVQVRPGHRLLDIGCGWGALVIRA 195

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            ++    + VGV +S    ++A       G+ E+ +    D +  VEG FD I S
Sbjct: 196 AQKYG-ARCVGVTLSQNQFDLATERVKAAGLQEQIEIRLQD-YRDVEGQFDRITS 248


>gi|312870826|ref|ZP_07730932.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 3008A-a]
 gi|312873060|ref|ZP_07733119.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 2062A-h1]
 gi|311091293|gb|EFQ49678.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 2062A-h1]
 gi|311093702|gb|EFQ52040.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LEAF 3008A-a]
          Length = 450

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTADDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           V+       + + L   W +  EGL  DVI  +PP
Sbjct: 347 VNNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|296876846|ref|ZP_06900894.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432348|gb|EFH18147.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 248

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS L    P++ KR +  I+DL  G GAV L     +   + +GV+I  +  ++A  + 
Sbjct: 33  VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGLFASTRTE-AQIIGVEIQERLADMATRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             N ++ +   +  D     + +     D+I+ NPPY +
Sbjct: 90  ALNDLNRQMSMITDDLKHLPQHIKGSKVDIILCNPPYFK 128


>gi|288817382|ref|YP_003431729.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus
           TK-6]
 gi|288786781|dbj|BAI68528.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus
           TK-6]
 gi|308750989|gb|ADO44472.1| Methyltransferase type 11 [Hydrogenobacter thermophilus TK-6]
          Length = 391

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +T   +D   A S+ R   +   R LDL   TG   L + K     + + VDIS +ALE+
Sbjct: 197 KTGFYLDQRKARSMIRQLVKPGYRCLDLFCHTGGFALNMRKAGAG-EVLAVDISAQALEV 255

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           AK NA  N + +    ++ + F  +  L      FD+++ +PP
Sbjct: 256 AKRNAELNSL-DNIVWMEENAFDFMRKLHKEGQVFDLVLMDPP 297


>gi|257792982|ref|YP_003186381.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479674|gb|ACV59992.1| Methyltransferase type 11 [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 270

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 19/124 (15%)

Query: 58  RDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           +DFY+           S+D F P   TE +++         +++ +  RILD+G G G  
Sbjct: 25  KDFYDTVAVGSGPYPASTDRFSPAAPTEKILEY--------VKRTNCRRILDVGCGMGTT 76

Query: 112 CLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFD 166
            L + +E     + +GVD S K +E A++++++     R    F    ++    +EG FD
Sbjct: 77  LLRMAQEHVSGVQFIGVDFSEKMIERARTSSLSLHDDLRKKIGFFVANAESLPYMEGQFD 136

Query: 167 VIVS 170
            + S
Sbjct: 137 FVFS 140


>gi|94496889|ref|ZP_01303463.1| ribosomal protein L11 methylase [Sphingomonas sp. SKA58]
 gi|94423565|gb|EAT08592.1| ribosomal protein L11 methylase [Sphingomonas sp. SKA58]
          Length = 333

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           + D+GTGTG +  A L   P    +  DI   A+EI+  NA  NGV
Sbjct: 165 VADIGTGTGLLAFAALNLWPRAHAIASDIDPVAVEISADNARANGV 210


>gi|55821542|ref|YP_139984.1| hypothetical protein stu1566 [Streptococcus thermophilus LMG 18311]
 gi|55823470|ref|YP_141911.1| hypothetical protein str1566 [Streptococcus thermophilus CNRZ1066]
 gi|55737527|gb|AAV61169.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55739455|gb|AAV63096.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 254

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 11/103 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139
           +DS L    P+I K+ +  I+DL +G GAV L  +   E+P    + V++  +  ++AK 
Sbjct: 33  IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---ILVELQERLADMAKR 87

Query: 140 NAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178
           +   N + ++   +  D  +    +     D+I+ NPPY ++ 
Sbjct: 88  SVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130


>gi|330469018|ref|YP_004406761.1| N-6 DNA methylase [Verrucosispora maris AB-18-032]
 gi|328811989|gb|AEB46161.1| N-6 DNA methylase [Verrucosispora maris AB-18-032]
          Length = 581

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 54/131 (41%), Gaps = 19/131 (14%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALL 116
           R F       S D + PR    LLVD   A     + + D+VR L D   GTG + LAL 
Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAERDAELTEADIVRSLYDPTAGTGGM-LALA 216

Query: 117 KESPFFKGVGVDIS-------------CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +E    +  G  +              CK+  +AK +  TN      +TL    F   + 
Sbjct: 217 EEHLLAQNPGAKLRLYGQEYNPQSYAICKSDLLAKGHDTTNIAFG--NTLTDPAFKDRK- 273

Query: 164 LFDVIVSNPPY 174
            FD  +SNPPY
Sbjct: 274 -FDFCMSNPPY 283


>gi|326509621|dbj|BAJ87026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+D     + +      PRPETE +VD   A     +E        DLGTG+GA+ +A+ 
Sbjct: 153 WKDLV---VAVRDGVLIPRPETEAVVDMVGA-----VEGFQDGWWADLGTGSGAIAVAVA 204

Query: 117 KE-SPFFKGVGVDISCKALEIAKSN 140
           +   P  +    D+S  A+E+A+ N
Sbjct: 205 RMLGPAGRVFATDVSEVAVEVARLN 229


>gi|269119307|ref|YP_003307484.1| methyltransferase type 11 [Sebaldella termitidis ATCC 33386]
 gi|268613185|gb|ACZ07553.1| Methyltransferase type 11 [Sebaldella termitidis ATCC 33386]
          Length = 243

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G+G +   L K +     +G+DIS K L  A+   ++N +  R+  L  +   S
Sbjct: 45  ILDIGCGSGDLSSILAKTANSV--LGIDISQKMLNTAREKNISNNI--RYQELSMENIDS 100

Query: 161 VEGLFDVIVSNPPY-----IESVIVDCLGL 185
           +   FD+ VS+  +      E +I+D   L
Sbjct: 101 LSEKFDIAVSSLAFHYVENFEKLILDISKL 130


>gi|193662159|ref|XP_001950779.1| PREDICTED: trimethylguanosine synthase-like [Acyrthosiphon pisum]
          Length = 248

 Score = 36.2 bits (82), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G+ ++  AL  +    K + +DI    +E+A++NA   GVS+R + +  D+++    L
Sbjct: 96  GAGSNSIQFALTSK----KVIAIDIDPIKIELARNNAKVYGVSDRIEFIIGDYYALAPTL 151

Query: 165 -FDVIVSNPPY 174
             DV+   PP+
Sbjct: 152 KADVVFLAPPW 162


>gi|332993180|gb|AEF03235.1| 3-demethylubiquinone-9 3-methyltransferase [Alteromonas sp. SN2]
          Length = 234

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 8/92 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +  ++ K     + VG+D++  +LEIAK + + +G++  +  + ++ F+
Sbjct: 51  KVVDIGCGGGILAESMAKAGA--EVVGLDMASASLEIAKLHGLESGINVDYHCVTAESFA 108

Query: 160 -SVEGLFDVI-----VSNPPYIESVIVDCLGL 185
            S  G FDV+     + + P   SV+  C  L
Sbjct: 109 DSHAGEFDVVTCMEMLEHVPDPASVVRSCAKL 140


>gi|296284180|ref|ZP_06862178.1| SAM-dependent methyltransferase [Citromicrobium bathyomarinum
           JL354]
          Length = 235

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 34/72 (47%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+L +G GTGA   AL  E      VGVD S + LEIA+      G+  R + +     
Sbjct: 50  ARVLCVGVGTGADIFALASERADLTFVGVDPSAQMLEIARHRLDEAGIGARCELVHGYVD 109

Query: 159 SSVEGLFDVIVS 170
           +  E  F  +VS
Sbjct: 110 AVAERDFAAVVS 121


>gi|296133941|ref|YP_003641188.1| ribosomal protein L11 methyltransferase [Thermincola sp. JR]
 gi|296032519|gb|ADG83287.1| ribosomal protein L11 methyltransferase [Thermincola potens JR]
          Length = 311

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+  ++ D+GTG+G   LA+       + V +DI   A+ +A+ NA  NGV+ + +    
Sbjct: 173 REGHKVYDVGTGSG--ILAITGAKLGAEVVSIDIDEVAVRVARENAALNGVAAKVEVKLG 230

Query: 156 DWFSSVEGLFDVIVSN 171
           D  +      D++V+N
Sbjct: 231 DLLAGETEPADIVVAN 246


>gi|219130619|ref|XP_002185459.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403173|gb|EEC43128.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 647

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 29/104 (27%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G   LA L      + V VD++ +AL++ + NA+ N +  +   +  D  S 
Sbjct: 293 LLDLCTGSGVQALAALTMEKANQAVCVDLNPRALQMTRLNAILNDLDTKVQCVLGDLTSD 352

Query: 161 V-------EGL----------------------FDVIVSNPPYI 175
           V       EG                       FD+I +NPP++
Sbjct: 353 VGRIYTNSEGSHDLAIDDKAQPLLDVLRRISPRFDLITANPPFL 396


>gi|14591077|ref|NP_143152.1| hypothetical protein PH1259 [Pyrococcus horikoshii OT3]
 gi|50401322|sp|O58994|Y1259_PYRHO RecName: Full=Uncharacterized RNA methyltransferase PH1259
 gi|3257678|dbj|BAA30361.1| 412aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 412

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 85  ALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           AL   L  +EK  +  ++LDL +G G + L L K    F+  GV+++  ++E+AK +A  
Sbjct: 260 ALPLLLKSVEKFCEGSKVLDLYSGIGTLSLYLAKRG--FEVTGVEVNGTSVEMAKRSAEI 317

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           N ++  F   +++  + +EG ++ ++ +PP
Sbjct: 318 NSINATFIQGKAE-DAELEG-YETLIVDPP 345


>gi|300727266|ref|ZP_07060682.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella bryantii
           B14]
 gi|299775504|gb|EFI72098.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella bryantii
           B14]
          Length = 484

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   +   S   K +G++   +A+E AK N+  NG+           D L
Sbjct: 341 VYDLYTGTGTIANFVAHHSK--KVIGIEYVPEAIEDAKVNSEINGIDNTLFYAGDMKDIL 398

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D F    G  DVI+++PP
Sbjct: 399 TDD-FIKQHGRPDVIITDPP 417


>gi|291531850|emb|CBK97435.1| Predicted O-methyltransferase [Eubacterium siraeum 70/3]
          Length = 245

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 100 RILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++ DL TG G V L +   + + P  +  GV+I  +A+E+   +   N +S+R   +  D
Sbjct: 41  KVCDLCTGCGIVPLIMCRNISKKPPKEIYGVEIMPEAVELFDKSVAENNLSDRIKPVLCD 100

Query: 157 WFSSVEGL----FDVIVSNPPY 174
                +G+    FD++  NPPY
Sbjct: 101 -LKDPQGVPREYFDIVTVNPPY 121


>gi|291526137|emb|CBK91724.1| Predicted SAM-dependent methyltransferase [Eubacterium rectale DSM
           17629]
          Length = 240

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+GT  G V +AL++ +   K + VDI+   LE A  +   NG++E+  T  S+   +
Sbjct: 14  LCDVGTDHGYVPIALVQGNIIPKAIAVDINKGPLERANEHIRANGLTEQITTRLSNGLEA 73

Query: 161 V-EGLFDVIV 169
           + +G  D IV
Sbjct: 74  IHDGEVDSIV 83


>gi|167749302|ref|ZP_02421429.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702]
 gi|167657747|gb|EDS01877.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702]
          Length = 245

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 8/82 (9%)

Query: 100 RILDLGTGTGAVCLAL---LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++ DL TG G V L +   + + P  +  G++I  +A+E+   +   N +S+R   +  D
Sbjct: 41  KVCDLCTGCGIVPLIMCRNISKKPPKEIYGIEIMPEAVELFDKSVAENNLSDRIKPVLCD 100

Query: 157 WFSSVEGL----FDVIVSNPPY 174
                +G+    FD++  NPPY
Sbjct: 101 -LKDPQGIPREYFDIVTVNPPY 121


>gi|84516663|ref|ZP_01004022.1| ribosomal protein L11 methyltransferase, putative [Loktanella
           vestfoldensis SKA53]
 gi|84509699|gb|EAQ06157.1| ribosomal protein L11 methyltransferase, putative [Loktanella
           vestfoldensis SKA53]
          Length = 287

 Score = 36.2 bits (82), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)

Query: 100 RILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           RILDLG GT  + +A  K    P       DI   A+++A++N   N +  + D L +  
Sbjct: 142 RILDLGCGTAVLAMAAAKVLGGPVLAS---DIDPVAIDVARANVTANALDGQVDCLVAAG 198

Query: 158 FSS----VEGLFDVIVSN 171
           F      + G FD+I +N
Sbjct: 199 FGGGDPRMTGPFDLIFAN 216


>gi|224006790|ref|XP_002292355.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971997|gb|EED90330.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 203

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 13/132 (9%)

Query: 47  KH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           KH ESI   L  R F N ++ L     E  P +  L  S +  ++ + +      ILDLG
Sbjct: 4   KHLESILSSLPHRVFPNPKIEL-----EQYPTSFQLTSSIVLTAISKNDAGPNRTILDLG 58

Query: 106 TGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
            GTG + L  A+   S  +    VD   +ALE+A+ N V   V E     + D      G
Sbjct: 59  CGTGMLGLGFAIANCSSVYL---VDCDDEALEMAREN-VEYLVEEELIGTECDGVDGEGG 114

Query: 164 -LFDVIVSNPPY 174
            L D +++NPP+
Sbjct: 115 CLVDTVITNPPF 126


>gi|182418012|ref|ZP_02949318.1| methyltransferase [Clostridium butyricum 5521]
 gi|237667114|ref|ZP_04527098.1| methyltransferase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182378183|gb|EDT75718.1| methyltransferase [Clostridium butyricum 5521]
 gi|237655462|gb|EEP53018.1| methyltransferase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 387

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
            K +G DI  K L++A  NA   GV +     + D+   S    +  IVSNPPY E +
Sbjct: 251 LKIIGYDIDYKTLKVAMENAKKAGVDKYIQFQKRDFMEFSTSRKYGFIVSNPPYGERI 308


>gi|156358208|ref|XP_001624415.1| predicted protein [Nematostella vectensis]
 gi|156211193|gb|EDO32315.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 9/147 (6%)

Query: 36  FFLTNAIVRSLK--HESIHRI-LGWRDFYNVRLTLSSDTFEPRPET---ELLVDSALAFS 89
           FF TNA V  ++   ++  R+ +  RD+           F         E LV  A    
Sbjct: 6   FFDTNAAVEKMRIISQTKKRVTINQRDYVVSPTVFDGSVFGEWKYNFLVEELVSMARGLL 65

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +      ++ L++G G GA+ +    + P  +    DI+  A+E    NA  +GV   
Sbjct: 66  KQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAENACLHGVENS 125

Query: 150 FDTLQSDWF--SSVEGL-FDVIVSNPP 173
              +Q+D F    ++G+ FD+I    P
Sbjct: 126 VTAIQADVFDCDGLKGMKFDMIFFRQP 152


>gi|38233824|ref|NP_939591.1| putative precorrin-6Y C5,15-methyltransferase [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200085|emb|CAE49765.1| Putative precorrin-6Y C5,15-methyltransferase [Corynebacterium
           diphtheriae]
          Length = 415

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 76  PETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           P++E + D  L      A ++  +  +    + D+G G+G++ +  L+ +P    V  +I
Sbjct: 230 PDSEYVTDGQLTKQHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEI 289

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           S +  E   SNA+  GVS+R    Q          FD +  NP
Sbjct: 290 SEERRERILSNAINLGVSDRIAVQQ-----GAPRAFDDVPDNP 327


>gi|121998457|ref|YP_001003244.1| type 12 methyltransferase [Halorhodospira halophila SL1]
 gi|121589862|gb|ABM62442.1| glycine/sarcosine N-methyltransferase [Halorhodospira halophila
           SL1]
          Length = 268

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 31/167 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  ++KR   R+LD+ TGTG   + L +    F+ V  D S + L  A  N    G  
Sbjct: 50  FFIQELKKRGAKRVLDVATGTGFHSVRLREAG--FEVVSADGSAEMLAKAFENGRKRGHI 107

Query: 148 ERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC------------------LGLE 186
            R  T+Q DW      + G +D I+        +  +C                  L L+
Sbjct: 108 LR--TVQVDWRWLNQDIHGRYDAIICLGNSFTHLFNECDRRKTLAEFYSALNHDGVLILD 165

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYN 230
            R++D    LD G D    Y    D VS    H++ DGL   +  ++
Sbjct: 166 QRNYDS--ILDHGYDSSHTYYYCGDDVSVYPEHVD-DGLARFKYAFS 209


>gi|312897474|ref|ZP_07756898.1| methyltransferase small domain protein [Megasphaera micronuciformis
           F0359]
 gi|310621535|gb|EFQ05071.1| methyltransferase small domain protein [Megasphaera micronuciformis
           F0359]
          Length = 244

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 97  DVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           DV++   LDLGTGT A+ L +L      +   ++++    +IA  N V NG        +
Sbjct: 42  DVIKGPTLDLGTGTAAIPL-ILSARGATEITALELNPVMADIAARNVVLNGKESCVVVRR 100

Query: 155 SDWFSSVE----GLFDVIVSNPPYIE 176
            D+    E    G F V+ +NPPY E
Sbjct: 101 GDYRRIEELFPAGSFSVVYANPPYRE 126


>gi|225686061|ref|YP_002734033.1| methyltransferase [Brucella melitensis ATCC 23457]
 gi|256043126|ref|ZP_05446068.1| methyltransferase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256111892|ref|ZP_05452848.1| methyltransferase [Brucella melitensis bv. 3 str. Ether]
 gi|256262818|ref|ZP_05465350.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260564348|ref|ZP_05834833.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265989558|ref|ZP_06102115.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993340|ref|ZP_06105897.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225642166|gb|ACO02079.1| methyltransferase [Brucella melitensis ATCC 23457]
 gi|260151991|gb|EEW87084.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|262764210|gb|EEZ10242.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000227|gb|EEZ12917.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263092639|gb|EEZ16860.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410385|gb|ADZ67449.1| methyltransferase [Brucella melitensis M28]
 gi|326553678|gb|ADZ88317.1| methyltransferase [Brucella melitensis M5-90]
          Length = 187

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 14/130 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDS---ALAFSLPRIEKRDVVRILDLGTGTG 109
           RI+G +  +  R  ++  T   RP T+   +S    LA S P  +K + VR+LDL  GTG
Sbjct: 2   RIVGGK--FRGRALVTPSTNAIRPTTDRTRESLFNILAHSFP--DKVEGVRVLDLFAGTG 57

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-----RFDTLQSDWFSSVEGL 164
           A+ L  L     +    V+ S     I + N    G+       R D  Q     ++E  
Sbjct: 58  ALGLEALSRGARYATF-VEESADGRGILRQNIEALGLQGHTKILRRDACQLGIVGTME-P 115

Query: 165 FDVIVSNPPY 174
           FD++ ++PPY
Sbjct: 116 FDLVFADPPY 125


>gi|151301132|ref|NP_001093089.1| methyltransferase [Bombyx mori]
 gi|87248173|gb|ABD36139.1| S-adenosylmethionine-dependent methyltransferase [Bombyx mori]
 gi|95102706|gb|ABF51291.1| methyltransferase [Bombyx mori]
          Length = 214

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ILD G G G + + A+L  + F   V +D    ALE+ + N +     E  D +Q D+ S
Sbjct: 56  ILDAGCGPGNLSIGAVLLGAGFVTSVEID--ADALEVFQEN-IQEMEIENIDIVQCDFLS 112

Query: 160 SV----EGLFDVIVSNPPY 174
                 E +FD ++ NPP+
Sbjct: 113 ESYFRWENMFDTVIMNPPF 131


>gi|37526150|ref|NP_929494.1| hypothetical protein plu2237 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785580|emb|CAE14530.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 315

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 24/37 (64%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +LDLG GTG   L L    P  + VG+D++ KALE+A
Sbjct: 38  VLDLGCGTGHRLLGLASMYPDTQFVGIDMTDKALEVA 74


>gi|317407433|gb|EFV87394.1| SAM-dependent methyltransferase [Achromobacter xylosoxidans C54]
          Length = 284

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  + LVD  L   + R+  RD  R++DLG+G G   +   +     +  G++ +   + 
Sbjct: 64  PTPQALVDKML--DMARVTPRD--RLMDLGSGDGRTVITAAQRG--LRAKGIEYNPDLVT 117

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           +++SNA   GV++R     +D F +     DVI 
Sbjct: 118 LSRSNAAKAGVADRATFEVADLFETDLSQADVIT 151


>gi|315923962|ref|ZP_07920190.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622802|gb|EFV02755.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 259

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R + ++L+ G GTG + L L K+   F+   VD+S + L +A   A T G+  RF
Sbjct: 47  RPIKKVLEFGCGTGNITLELAKKG--FEVTAVDLSEEMLTVADEKADTAGLPVRF 99


>gi|302850509|ref|XP_002956781.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f.
           nagariensis]
 gi|300257841|gb|EFJ42084.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f.
           nagariensis]
          Length = 322

 Score = 36.2 bits (82), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 18/150 (12%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD-SA 85
           +S+ D+     L +  V  L  +SIH+ +G   ++            PRP+    V  + 
Sbjct: 70  NSLGDEALSALLEDEDVPELTVDSIHKFIGSSRYHTAGGV-------PRPKILAQVSGTG 122

Query: 86  LA-FSLPRIEK--RDVV-------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           LA + + R +K  RD+V       R+LD G G G   L + K  P  K   VD+  + LE
Sbjct: 123 LAPWEIHRPQKFVRDLVLRRCFSGRVLDAGCGIGDNALYVAKACPGAKVTAVDVVPRCLE 182

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            A + A    +  + D + +D   +  G  
Sbjct: 183 FAAAKANLRNMRNQLDLVVADLLENDSGCL 212


>gi|319407489|emb|CBI81138.1| ribosomal protein L11 methyltransferase [Bartonella sp. 1-1C]
          Length = 289

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 9/85 (10%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           I+  +    LDLGTG+G  A+ +A+LK  P    +  DI   A+++A+ N   NGV++  
Sbjct: 146 IQNENPKNALDLGTGSGILAIGIAMLK--PIVV-LAADIDPIAIKVAQQNIRFNGVTDYV 202

Query: 151 DTLQSDWFS----SVEGLFDVIVSN 171
             +    FS    +    FD+IV+N
Sbjct: 203 TAITITGFSDNKVASRAPFDLIVAN 227


>gi|302557047|ref|ZP_07309389.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
 gi|302474665|gb|EFL37758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
          Length = 286

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           ++GW +F+  R+T+    F PR  TE LV+ ALA
Sbjct: 71  VVGWAEFHGRRITVEPGVFVPRRRTEFLVEQALA 104


>gi|302846254|ref|XP_002954664.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f.
           nagariensis]
 gi|300260083|gb|EFJ44305.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f.
           nagariensis]
          Length = 214

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 11/112 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +++++ GTG G   +  L  +     V G +++  +  +A+ NA   G+SER+    S  
Sbjct: 31  LKVVEFGTGDGKPVINALNVTRLGCVVYGFELNPISAGLARDNAAAFGMSERYQVGTSAP 90

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            S   G    +++NPPY+ +   D L  E         L GG+DG    R++
Sbjct: 91  NSPTAGAV-CLIANPPYLPAPNSDILMPE---------LHGGVDGGELTRSL 132


>gi|296876980|ref|ZP_06901024.1| probable methyltransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432015|gb|EFH17818.1| probable methyltransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 182

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G + +  +      + V V+   +A EI  +N       ERF  L+ +   
Sbjct: 47  RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 105

Query: 160 SV---EGLFDVIVSNPPYIESVIV 180
           ++    G FD++  +PPY +  IV
Sbjct: 106 ALGLLTGTFDLVFLDPPYAKEEIV 129


>gi|296167043|ref|ZP_06849455.1| thiopurine S-methyltransferase family protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295897600|gb|EFG77194.1| thiopurine S-methyltransferase family protein [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 222

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 19/118 (16%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           EP+PE   L+++                +LD G G  AV L L +    F  VG+D S  
Sbjct: 25  EPQPEIAALIEAGKFHG----------DVLDAGCGEAAVSLFLAERG--FTTVGLDQSPT 72

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A+++A   A   G++   FD      F   +G F  IV      +S +   + +E+R+
Sbjct: 73  AIKLATEKAARRGLANATFDVADISAFGGYDGRFGTIV------DSTLFHSMPVELRE 124


>gi|163841474|ref|YP_001625879.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162954950|gb|ABY24465.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
          Length = 544

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 16/146 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------ERF 150
           R LDLGTG G     LL+          DIS +AL   + N + N  +          R 
Sbjct: 165 RALDLGTGCGIQTFHLLRHVRHV--TATDISERALAFTRFNLLLNATALAVDPTDLEHRV 222

Query: 151 DTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                     V G  FD+IVSNPP++ +   D   L    F  R   DGG+ G     ++
Sbjct: 223 SLRLGSLLEPVRGQRFDLIVSNPPFVITPRYDG-ELSADQFTYR---DGGLPGDEIVSSL 278

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDV 235
              +   L + G   +   +  +VD 
Sbjct: 279 VRALPDALVEGGTAQLLGNWEVRVDA 304


>gi|153829117|ref|ZP_01981784.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875375|gb|EDL73510.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 340

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++D+G G G +   + K +   +    DIS  A+  ++   V N +        SD FS
Sbjct: 203 KVIDIGCGAGVLGCVMAKLNSHIELEMTDISALAIRSSQETLVANQLHGH--VYPSDMFS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +D IV+NPP+
Sbjct: 261 DTGHHYDYIVTNPPF 275


>gi|28868361|ref|NP_790980.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|81732241|sp|Q887Y4|RSMC_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|28851598|gb|AAO54675.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|331018085|gb|EGH98141.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 332

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +  T   D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLEAQVVT--GDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|308064266|gb|ADO06153.1| hypothetical protein HPSAT_07255 [Helicobacter pylori Sat464]
          Length = 238

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           FS P I+  D   ILD+G+G G + L   +++P      V+   K    ++ NA+    +
Sbjct: 27  FSRPFIKNSDA--ILDIGSGCGVLGLLCARDNPLASVHLVEKDGKMAFCSQKNALKFPNA 84

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + F++   D+   +  L+D IV NPP+
Sbjct: 85  QVFESDFLDFKPPI--LYDAIVCNPPF 109


>gi|282878591|ref|ZP_06287369.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC
           35310]
 gi|281299291|gb|EFA91682.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC
           35310]
          Length = 287

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 20/111 (18%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +++ + L  SL         R+LD G GTG + +A LK       VG DI   ++E  
Sbjct: 136 TRMMIGAMLQLSLKG------KRVLDSGCGTGILGIAALKLGAEAV-VGFDIDEWSVENT 188

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN----------PPYIE 176
           + NA  N V +  +    D    S V G+FDV+++N          P Y+E
Sbjct: 189 QHNAAINEV-DNIEVFHGDAHVLSHVSGVFDVVLANINRNILLNDMPAYLE 238


>gi|260771195|ref|ZP_05880122.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
 gi|260613792|gb|EEX38984.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
          Length = 340

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +    P       DIS  A+  ++     NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGGVMAMLYPNIALEMCDISALAIRSSQETLAANGLSGR--VFASDVYS 260

Query: 160 SVEGLFDVIVSNPPY 174
                +  IV+NPP+
Sbjct: 261 DTASDYQFIVTNPPF 275


>gi|256783490|ref|ZP_05521921.1| hypothetical protein SlivT_03280 [Streptomyces lividans TK24]
 gi|289767368|ref|ZP_06526746.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697567|gb|EFD64996.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 248

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDL +G+G +     ++  F  G GVDI     E A++ A   GV++R D +  D
Sbjct: 38  TRVLDLASGSGEMLCTWARDLGF-TGTGVDIGSLFTEQARARAAELGVADRVDFIHGD 94


>gi|251783101|ref|YP_002997404.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242391731|dbj|BAH82190.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|323127851|gb|ADX25148.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 384

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           G DI  + +EIAKSNA   G+S+   F  ++   F + + +  VI+SNPPY E ++ D
Sbjct: 261 GFDIDSRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKVNGVIISNPPYGERLLDD 317


>gi|119776444|ref|YP_929184.1| hypothetical protein Sama_3312 [Shewanella amazonensis SB2B]
 gi|119768944|gb|ABM01515.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 211

 Score = 36.2 bits (82), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 57/142 (40%), Gaps = 22/142 (15%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LDL  G G + L L    P     G D+S + L +AK+ A+ +G    F  L     
Sbjct: 50  TRLLDLACGPGTLSLHLKSRFPHLAITGTDLSPRMLSLAKA-ALPDG---EFHCLDLRDT 105

Query: 159 SSVEGLFDVIVS--NPPYIES-----VIVDCLGLEVR-----------DFDPRISLDGGI 200
           S + G FDVI      PY++S     ++ DC     +           D  P    +   
Sbjct: 106 SRLAGEFDVIACAFGLPYLDSQSAAQLLQDCAAKLAKGGLMYLSFIECDTTPHSQTNSHG 165

Query: 201 DGLSHYRTIADGVSRHLNKDGL 222
           D +      A+G+   L+  GL
Sbjct: 166 DSVWRQGHTAEGIDSQLSAQGL 187


>gi|154250316|ref|YP_001411141.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
 gi|154154252|gb|ABS61484.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
          Length = 223

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D+  +++LG+GTG V  AL K    +   G++I  +  E+A      N + ++   L  D
Sbjct: 43  DIKNVIELGSGTGIVAFALAKLYNLYV-TGIEIQHELYELAIEGIHVNNLEDKVKFLHCD 101

Query: 157 ------WFSSVEGLFDVIVSNPPY 174
                 +F +    FD++VSN P+
Sbjct: 102 VRDVENYFKAES--FDMVVSNFPF 123


>gi|300771365|ref|ZP_07081241.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300762035|gb|EFK58855.1| UbiE/COQ5 family methyltransferase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 244

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L    P  E ++V   LDLG G G  C+   K+      +GVD+S K +  AK N+    
Sbjct: 34  LKMMFPDFENKNV---LDLGCGYGWHCI-YAKQQGASNVIGVDLSAKMIRKAKENSAGLD 89

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           +  R   ++   F++ E  FD+++S+
Sbjct: 90  IDYRQMAIEHVDFATEE--FDIVISS 113


>gi|20089604|ref|NP_615679.1| hypothetical protein MA0719 [Methanosarcina acetivorans C2A]
 gi|19914523|gb|AAM04159.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 197

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 8/76 (10%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLG GTG  A+   LL      K VG D   KALE+A+ NA   GV   F  + SD  
Sbjct: 50  VQDLGCGTGILAIGAKLLGAR---KVVGYDTDPKALEVARKNAERLGVEVEF--VCSD-I 103

Query: 159 SSVEGLFDVIVSNPPY 174
             V G     + NPP+
Sbjct: 104 KKVSGHVKTTLMNPPF 119


>gi|186685491|ref|YP_001868687.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186467943|gb|ACC83744.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 265

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 20/134 (14%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + +LD G GTG +   L       KG    G+D S + +EIAK  A  N +   F     
Sbjct: 55  LSVLDAGCGTGYLARQLC-----LKGASVTGIDFSPQMIEIAKFRASQNNLDIDFHLDSC 109

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDGGIDGL--SHYRTIA 210
               S+ +  FD+IVSN      V++D L LE  +R F+ R+    GI  L  SH     
Sbjct: 110 TELKSLPDEQFDMIVSN-----YVLMDLLDLEGAIRAFN-RVLKPSGIAILVFSH-PCFP 162

Query: 211 DGVSRHLNKDGLCS 224
            G S  +N+DG  S
Sbjct: 163 QGNSTTVNEDGTVS 176


>gi|114799616|ref|YP_759109.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas
           neptunium ATCC 15444]
 gi|114739790|gb|ABI77915.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas
           neptunium ATCC 15444]
          Length = 285

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R   R+LDLGTG+G + +A LK       VG DI   ++ +A+ NA  N VS  F
Sbjct: 143 RKPGRVLDLGTGSGVLAIAALKVGAEM-AVGTDIDRDSVFVARDNARKNHVSRFF 196


>gi|148657852|ref|YP_001278057.1| methyltransferase small [Roseiflexus sp. RS-1]
 gi|148569962|gb|ABQ92107.1| methyltransferase small [Roseiflexus sp. RS-1]
          Length = 198

 Score = 36.2 bits (82), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILDLG G G + + L +  P  + +  D    A+  A+ NA  N  +   + + S  F  
Sbjct: 58  ILDLGCGCGVIGIVLARWFPQARVILADRDLLAVRYARHNAALNQ-TPNVEVIGSVGFEH 116

Query: 161 VEGL-FDVIVSNPP 173
           +  L FD+IVSN P
Sbjct: 117 IPALPFDLIVSNIP 130


>gi|325681112|ref|ZP_08160642.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8]
 gi|324107034|gb|EGC01320.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8]
          Length = 409

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A +  +       VD+S  A++ AK+NA  NG+S++ D + +D F
Sbjct: 237 RVLDCFTHTGSFALNAAMGGAEHV--TAVDVSQFAVDTAKANAERNGLSDKMDFVCADVF 294

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      +D ++ +PP
Sbjct: 295 DLLPKLAEEKAGYDFVILDPP 315


>gi|317048909|ref|YP_004116557.1| ubiquinone biosynthesis O-methyltransferase [Pantoea sp. At-9b]
 gi|316950526|gb|ADU70001.1| ubiquinone biosynthesis O-methyltransferase [Pantoea sp. At-9b]
          Length = 243

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWF 158
           ++LD+G G G +  ++ +E       G+D+  + LE+A+ +A+ +GVS  +      D  
Sbjct: 59  KVLDVGCGGGILAESMAREGANV--TGLDMGAEPLEVARLHALESGVSVNYVQQTVEDHA 116

Query: 159 SSVEGLFDVI-----VSNPPYIESVIVDCLGL 185
           +S  G +DV+     + + P   SV++ C  L
Sbjct: 117 TSHAGEYDVVTCMEMLEHVPDPRSVVLACAQL 148


>gi|254881958|ref|ZP_05254668.1| RNA methyltransferase [Bacteroides sp. 4_3_47FAA]
 gi|319641039|ref|ZP_07995743.1| RNA methyltransferase [Bacteroides sp. 3_1_40A]
 gi|254834751|gb|EET15060.1| RNA methyltransferase [Bacteroides sp. 4_3_47FAA]
 gi|317387283|gb|EFV68158.1| RNA methyltransferase [Bacteroides sp. 3_1_40A]
          Length = 473

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + F +  G  DVI+++PP
Sbjct: 387 TQE-FINQHGRPDVIITDPP 405


>gi|196248986|ref|ZP_03147686.1| Methyltransferase type 12 [Geobacillus sp. G11MC16]
 gi|196211862|gb|EDY06621.1| Methyltransferase type 12 [Geobacillus sp. G11MC16]
          Length = 247

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 71/179 (39%), Gaps = 39/179 (21%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +  R  +R   +++D+G GTG + + L K    ++  GVD+S   L IA+  A   G+  
Sbjct: 29  AFDRYAQRPGRQVIDIGCGTGELAIRLAKAG--WQVSGVDVSEHMLVIAQEKAEAAGIHV 86

Query: 149 RF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            F   +  + D FS ++G F            +  D L     + D +            
Sbjct: 87  PFFEQNMAELDGFSDLDGAF------------IFCDALNYLTDEDDVK------------ 122

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            RT +  V R L  DGL   ++    K+DV        LF    F D+G +   +  C 
Sbjct: 123 -RTFS-AVYRALGADGLLLFDVHSVYKMDV--------LFRDAVFADHGEDISYIWTCH 171


>gi|170099690|ref|XP_001881063.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643742|gb|EDR07993.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 299

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSERFDTLQ-S 155
           RILD+G G+G V   + K     KG   VGVD S   +E AK+N + +        LQ  
Sbjct: 52  RILDVGCGSGEVTFVIDKVVRRQKGGLVVGVDYSESMIEKAKANGIEHAFIGDAQALQIP 111

Query: 156 DWFSSVEGLFDVIVSN 171
           + F    G FD + SN
Sbjct: 112 EEFQEHVGKFDAVFSN 127


>gi|94499825|ref|ZP_01306361.1| methyltransferase, putative [Oceanobacter sp. RED65]
 gi|94428026|gb|EAT13000.1| methyltransferase, putative [Oceanobacter sp. RED65]
          Length = 189

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++   +  P I       +LD+  G+GA+    L       GV ++ + KA+
Sbjct: 30  RPTTDRVRETLFNWLAPYIP---AAHVLDVFAGSGALGFEALSRGAE-HGVLLEKNAKAV 85

Query: 135 EIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCL 183
           +  K N     +S   D +Q+D   +  + E  FDVI  +PP+ + ++  CL
Sbjct: 86  KQLKENCQV--LSCNADVVQTDALVFLQNCEQAFDVIFLDPPFNKGLLPSCL 135


>gi|325285562|ref|YP_004261352.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Cellulophaga lytica DSM 7489]
 gi|324321016|gb|ADY28481.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Cellulophaga lytica DSM 7489]
          Length = 242

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+ +  V ILD+ TGTG + + L K     K  G+DIS   LE+ K       +S   D 
Sbjct: 53  IKSKKPVTILDIATGTGDLAINLTKTGA-TKITGLDISPGMLEVGKQKVAAKNLSNTIDM 111

Query: 153 LQSD 156
           +  D
Sbjct: 112 IIGD 115


>gi|149414444|ref|XP_001514044.1| PREDICTED: similar to THUMP domain containing 2, partial
           [Ornithorhynchus anatinus]
          Length = 343

 Score = 36.2 bits (82), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 32/159 (20%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG--------WR---------------DFY 61
           D DS    R     + AI R+   + + R++G        W+               D Y
Sbjct: 184 DNDSPFTFRVSCRCSGAIARAFTSQEVGRVIGMTLIKQFAWKADLRNPDLEIFIHLNDMY 243

Query: 62  NV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +V      RL L+S T+         +  A+A SL  I    +V  LD   G G + L  
Sbjct: 244 SVVGIPVFRLPLASRTYIKTAGLRSTIAWAMA-SLAEINAGSLV--LDPMCGLGTILLEA 300

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            KE P    +G DIS   L++A+ N    G+ ++ + L+
Sbjct: 301 AKEWPDANYLGTDISNSQLQVARDNVNAAGLMDKIELLK 339


>gi|307720668|ref|YP_003891808.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
 gi|306978761|gb|ADN08796.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
          Length = 231

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G G G V L + +++   +   V+     +   K+NA  N +S  +   + D+  
Sbjct: 31  KVLDVGAGCGIVGLLVARDNKKVELEAVEKQEAFIHFCKTNARVNNIS--YKLYECDFLE 88

Query: 160 SVE-GLFDVIVSNPPY 174
             E   +D I+SNPP+
Sbjct: 89  LTEKNKYDYIISNPPF 104


>gi|294775567|ref|ZP_06741077.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides vulgatus
           PC510]
 gi|294450617|gb|EFG19107.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacteroides vulgatus
           PC510]
          Length = 473

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + F +  G  DVI+++PP
Sbjct: 387 TQE-FINQHGRPDVIITDPP 405


>gi|157377249|ref|YP_001475849.1| ribosomal protein L11 methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|189037705|sp|A8G0U8|PRMA_SHESH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157319623|gb|ABV38721.1| ribosomal protein L11 methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 293

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++D G G+G + +A LK     K  G+DI  +A++ +K+NA  NGV ++ 
Sbjct: 161 EVIDFGCGSGILAVAALKLGAT-KVTGIDIDYQAIDASKANAERNGVEDQL 210


>gi|146318073|ref|YP_001197785.1| N6-adenine-specific DNA methylase [Streptococcus suis 05ZYH33]
 gi|253751266|ref|YP_003024407.1| RNA methylase family protein [Streptococcus suis SC84]
 gi|253753167|ref|YP_003026307.1| RNA methylase family protein [Streptococcus suis P1/7]
 gi|253754990|ref|YP_003028130.1| RNA methylase family protein [Streptococcus suis BM407]
 gi|145688879|gb|ABP89385.1| Predicted N6-adenine-specific DNA methylase [Streptococcus suis
           05ZYH33]
 gi|251815555|emb|CAZ51138.1| putative RNA methylase family protein [Streptococcus suis SC84]
 gi|251817454|emb|CAZ55195.1| putative RNA methylase family protein [Streptococcus suis BM407]
 gi|251819412|emb|CAR44876.1| putative RNA methylase family protein [Streptococcus suis P1/7]
 gi|292557835|gb|ADE30836.1| Putative RNA methylase [Streptococcus suis GZ1]
 gi|319757546|gb|ADV69488.1| N6-adenine-specific DNA methylase [Streptococcus suis JS14]
          Length = 388

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 13/64 (20%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            G DI  + +EIAK NA   GV +       R   L++D    + G   VI+SNPPY E 
Sbjct: 260 TGSDIDARMIEIAKKNAFAAGVEQDIVFKQMRVQDLRTD---KING---VIISNPPYGER 313

Query: 178 VIVD 181
           ++ D
Sbjct: 314 LLDD 317


>gi|21225490|ref|NP_631269.1| hypothetical protein SCO7213 [Streptomyces coelicolor A3(2)]
 gi|8546924|emb|CAB94636.1| conserved hypothetical protein SC2H12.12 [Streptomyces coelicolor
           A3(2)]
          Length = 248

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            R+LDL +G+G +     ++  F  G GVDI     E A++ A   GV++R D +  D
Sbjct: 38  TRVLDLASGSGEMLCTWARDLGF-TGTGVDIGSLFTEQARARAAELGVADRVDFIHGD 94


>gi|322388990|ref|ZP_08062560.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           parasanguinis ATCC 903]
 gi|321144295|gb|EFX39703.1| ribosomal RNA small subunit methyltransferase D [Streptococcus
           parasanguinis ATCC 903]
          Length = 182

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G + +  +      + V V+   +A EI  +N       ERF  L+ +   
Sbjct: 47  RVLDLYAGSGGLSIEAVSRG-MSEAVLVERDRRAQEIVAANIAMTKEKERFQLLKMEAKQ 105

Query: 160 SV---EGLFDVIVSNPPYIESVIV 180
           ++    G FD++  +PPY +  IV
Sbjct: 106 ALGLLTGTFDLVFLDPPYAKEEIV 129


>gi|224010878|ref|XP_002294396.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969891|gb|EED88230.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 548

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 30/47 (63%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++D+  GTG + L L+KE      VGVDI+  A+  A++NA  NG++
Sbjct: 376 LVDVCCGTGTIGLTLMKEGVVGSLVGVDIAKPAILDARANAEKNGMT 422


>gi|77164110|ref|YP_342635.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
 gi|254435711|ref|ZP_05049218.1| Methyltransferase domain family [Nitrosococcus oceani AFC27]
 gi|76882424|gb|ABA57105.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
 gi|207088822|gb|EDZ66094.1| Methyltransferase domain family [Nitrosococcus oceani AFC27]
          Length = 346

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----- 153
           R+LDLG G+G    AL +   P  K VGVD++ + L +A+S+   +  S  FD +     
Sbjct: 64  RVLDLGCGSGRDVYALAQLVGPEGKVVGVDMTDEQLAVAQSHQGWHTESFGFDNVSFIKG 123

Query: 154 ---QSDWFSSVEGLFDVIVSN 171
              + D      G FDVIVSN
Sbjct: 124 YIEKLDELDLEPGSFDVIVSN 144


>gi|150018307|ref|YP_001310561.1| methyltransferase type 11 [Clostridium beijerinckii NCIMB 8052]
 gi|149904772|gb|ABR35605.1| Methyltransferase type 11 [Clostridium beijerinckii NCIMB 8052]
          Length = 209

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +ILD+G GTG V + L     F  G+ GVDIS   ++IAK N    G         S++ 
Sbjct: 51  KILDVGCGTGNVLIKLSANYKF--GLYGVDISENMIKIAKKNL---GDKAELKVGDSEYI 105

Query: 159 SSVEGLFDVIVSNPPY 174
              +  FDVIV N  +
Sbjct: 106 PWEDNSFDVIVCNASF 121


>gi|116513947|ref|YP_812853.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|122275283|sp|Q04AV7|PRMA_LACDB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116093262|gb|ABJ58415.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 314

 Score = 36.2 bits (82), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + + D+GTG+G + +A  K     K V   DIS +++  A+ NA  NG+ +     ++  
Sbjct: 178 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSL 234

Query: 158 FSSVEGLFDVIVSN 171
            + V+G FD+IV+N
Sbjct: 235 LADVDGKFDLIVAN 248


>gi|213967188|ref|ZP_03395337.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato T1]
 gi|301381077|ref|ZP_07229495.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061548|ref|ZP_07253089.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato K40]
 gi|302133231|ref|ZP_07259221.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928030|gb|EEB61576.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato T1]
          Length = 332

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++   
Sbjct: 176 LDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTL 235

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             NG+  +  T   D   +     + I+SNPP+   V  D +  E
Sbjct: 236 AANGLEAQVVT--GDGIDAAPMGLNTILSNPPFHVGVHTDYMATE 278


>gi|163743145|ref|ZP_02150527.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10]
 gi|161383562|gb|EDQ07949.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10]
          Length = 404

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGL-FDVIVSNPP 173
           VD S  AL++A+  A  N  ++RF   Q D F      + EG+ FDV++ +PP
Sbjct: 258 VDGSAPALDLAREGAAANDFADRFAARQGDAFEVLTQLAEEGVQFDVVICDPP 310


>gi|150005861|ref|YP_001300605.1| RNA methyltransferase [Bacteroides vulgatus ATCC 8482]
 gi|149934285|gb|ABR40983.1| RNA methyltransferase [Bacteroides vulgatus ATCC 8482]
          Length = 473

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   + +++   K +G++   +A+E AK N+  NG+           D L
Sbjct: 329 VYDLYTGTGTIANFVSRQAK--KVIGIEYVPEAIEDAKVNSAINGIDNTLFYAGDMKDIL 386

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             + F +  G  DVI+++PP
Sbjct: 387 TQE-FINQHGRPDVIITDPP 405


>gi|329766688|ref|ZP_08258231.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329136943|gb|EGG41236.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 259

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G GTG    ++ K+      +G+D S +A++IAKS  +   +   F  +     S 
Sbjct: 49  VLDVGCGTGYFAYSVAKKGA--NVLGIDFSIEAIQIAKSQYIHPNL--EFKAID---VSK 101

Query: 161 VEGLFDVIVSN 171
           ++  FDVIVSN
Sbjct: 102 IKEKFDVIVSN 112


>gi|119489671|ref|ZP_01622430.1| hypothetical protein L8106_13140 [Lyngbya sp. PCC 8106]
 gi|119454408|gb|EAW35557.1| hypothetical protein L8106_13140 [Lyngbya sp. PCC 8106]
          Length = 245

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---D 151
           K  V  +LDLG G G +   +L + P  K V +D S   +   K+    +     F   D
Sbjct: 43  KSQVNTVLDLGCGDGILGRTILTQYPHAKVVFLDFSEAMISAVKNKFQNSDYQVNFVLGD 102

Query: 152 TLQSDWFSSVE--GLFDVIVS 170
             Q+ W + V+  G FDVIVS
Sbjct: 103 FAQTSWVNWVQDFGKFDVIVS 123


>gi|89095195|ref|ZP_01168119.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92]
 gi|89080553|gb|EAR59801.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92]
          Length = 378

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTLQSD 156
           RI+DLG G G V L   + +P  +   VD S  A+  A  N   A  N  +  F  L +D
Sbjct: 236 RIIDLGCGNGVVGLMAAERNPSAELTFVDESFMAVASASENFNAAFANTRTGSF--LATD 293

Query: 157 WFSSVE-GLFDVIVSNPPY-IESVIVDCLGLEV 187
               +E    D+I++NPP+  ++V+ D + L++
Sbjct: 294 CLKGIEKNSADLILNNPPFHQQNVVGDFIALQM 326


>gi|309809377|ref|ZP_07703239.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           SPIN 2503V10-D]
 gi|308170288|gb|EFO72319.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           SPIN 2503V10-D]
          Length = 449

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTSDDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           ++       + + L   W +  EGL  DVI  +PP
Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|149597718|ref|XP_001521263.1| PREDICTED: similar to HEMK homolog, partial [Ornithorhynchus
           anatinus]
          Length = 182

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           G  D++VSNPPYI    +  L  E+  ++   +LDGG DG+   R I
Sbjct: 87  GPVDLVVSNPPYIFQSDMAHLAAEILSYEDPDALDGGEDGMKVIRDI 133


>gi|21224237|ref|NP_630016.1| methyltransferase [Streptomyces coelicolor A3(2)]
 gi|256784679|ref|ZP_05523110.1| methyltransferase [Streptomyces lividans TK24]
 gi|289768565|ref|ZP_06527943.1| methyltransferase [Streptomyces lividans TK24]
 gi|2808756|emb|CAA16186.1| putative methyltransferase [Streptomyces coelicolor A3(2)]
 gi|289698764|gb|EFD66193.1| methyltransferase [Streptomyces lividans TK24]
          Length = 362

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV+ A+A +L   ++   VR+L++G G+G       + +P    + VD+     + A +N
Sbjct: 175 LVEEAIARTL---DRNAPVRLLEVGCGSGTYVRYAAELNPRLSALAVDLQQDVADSAAAN 231

Query: 141 AVTNGVSERFDTLQSD 156
               G+++R +T Q+D
Sbjct: 232 MAEWGLTDRVETRQAD 247


>gi|84497365|ref|ZP_00996187.1| hypothetical protein JNB_14263 [Janibacter sp. HTCC2649]
 gi|84382253|gb|EAP98135.1| hypothetical protein JNB_14263 [Janibacter sp. HTCC2649]
          Length = 472

 Score = 36.2 bits (82), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G  TGA+  AL   S     V VD S +AL+IA+    T+G+S     +      
Sbjct: 323 RVLDIGCSTGALTTALAGRSGAV--VAVDASARALDIARCGR-THGIS-WVQGVAPHVLR 378

Query: 160 SVEGLFDVIV 169
            +EG FD++V
Sbjct: 379 DIEGTFDLVV 388


>gi|260426046|ref|ZP_05780025.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260420538|gb|EEX13789.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 366

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
           + VD S  AL +A+  A   G ++RF   Q D FS+++ L      F V++ +PP
Sbjct: 219 LAVDGSAPALALAEEGARRMGAADRFAIRQGDAFSTLDALGQENARFGVVICDPP 273


>gi|195124780|ref|XP_002006865.1| GI18358 [Drosophila mojavensis]
 gi|193911933|gb|EDW10800.1| GI18358 [Drosophila mojavensis]
          Length = 217

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +   R+LDLG G G   +AL  E  F +  GVD S KA+E+A
Sbjct: 56  KKTARVLDLGCGNGMFLIALANEG-FARLTGVDYSPKAIELA 96


>gi|309804713|ref|ZP_07698778.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 09V1-c]
 gi|309808903|ref|ZP_07702784.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 01V1-a]
 gi|325911406|ref|ZP_08173818.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           UPII 143-D]
 gi|308166105|gb|EFO68323.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 09V1-c]
 gi|308167901|gb|EFO70038.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           LactinV 01V1-a]
 gi|325476756|gb|EGC79910.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lactobacillus iners
           UPII 143-D]
          Length = 449

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 13/95 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++   DVV  +D  +G G + L++ K     K +GV+I   A++ AK NA+ NG
Sbjct: 291 LAIQKAQLTSDDVV--IDAYSGIGTIGLSVAKHVK--KVLGVEIVRDAVKDAKKNAILNG 346

Query: 146 VSE------RFDTLQSDWFSSVEGL-FDVIVSNPP 173
           ++       + + L   W +  EGL  DVI  +PP
Sbjct: 347 INNAEYFEGKAEELMPQWAN--EGLKTDVIFVDPP 379


>gi|304404178|ref|ZP_07385840.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9]
 gi|304347156|gb|EFM12988.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9]
          Length = 764

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+L++G G G   LAL    P     G + + +A  IA++  VT   S R D    DW 
Sbjct: 265 LRVLEVGCGCGGTLLALKYRCPSAVLFGAERNEQARGIAEAVGVTMFSSGRPD----DWQ 320

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR---TIADG 212
              +G  DVI+    +  + +   L   +R   P   L  G      YR    +ADG
Sbjct: 321 LIEDGTLDVILIGEAHAYTAVPTQLTRMIRKLRPGGWLVAGFMNAKFYRYANRLADG 377


>gi|284050233|ref|ZP_06380443.1| methyltransferase, UbiE/COQ5 family protein [Arthrospira platensis
           str. Paraca]
 gi|291566565|dbj|BAI88837.1| putative methyltransferase [Arthrospira platensis NIES-39]
          Length = 203

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 17/119 (14%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   ILD+G GTG +   L K+ P  +G G D+S + ++ AK+    N   +R   L
Sbjct: 41  EFPNSANILDIGCGTGRLLQRLAKQFPDLEGTGFDLSPQMIKEAKNK---NIYGDRLQFL 97

Query: 154 QSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           Q +    VE L      FD +     ++     + +  E++    R+   GG+  L+ Y
Sbjct: 98  QGN----VEALPFPESSFDAVFCTISFLHYPHPELVLAEIK----RVLRPGGVFYLADY 148


>gi|226438391|pdb|3GRZ|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methylase From
           Lactobacillus Delbrueckii Subsp. Bulgaricus
 gi|226438392|pdb|3GRZ|B Chain B, Crystal Structure Of Ribosomal Protein L11 Methylase From
           Lactobacillus Delbrueckii Subsp. Bulgaricus
          Length = 205

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           + + D+GTG+G + +A  K     K V   DIS +++  A+ NA  NG+ +     ++  
Sbjct: 62  LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSL 118

Query: 158 FSSVEGLFDVIVSN 171
            + V+G FD+IV+N
Sbjct: 119 LADVDGKFDLIVAN 132


>gi|145637282|ref|ZP_01792943.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|145640648|ref|ZP_01796231.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145269534|gb|EDK09476.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|145274574|gb|EDK14437.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.4-21]
          Length = 295

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     S+   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADRLQLFLSNEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|90019953|ref|YP_525780.1| putative SAM-dependent methyltransferase [Saccharophagus degradans
           2-40]
 gi|123396751|sp|Q21P11|RLMF_SACD2 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|89949553|gb|ABD79568.1| protein of unknown function DUF890 [Saccharophagus degradans 2-40]
          Length = 320

 Score = 36.2 bits (82), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFD 151
           + V++LD+GTG   +   L      ++ VG DI+ ++L      +A +  +   +S R  
Sbjct: 120 NAVKMLDVGTGANGIYTLLACAVYGWRCVGSDINSESLANVKAVLANNPTLNANISLRLQ 179

Query: 152 TLQSDWFSSV---EGLFDVIVSNPPYIES 177
             +  +FS +   +  FDV V NPP+  S
Sbjct: 180 PNKDAFFSQIIQTDDYFDVSVCNPPFHAS 208


>gi|325479656|gb|EGC82748.1| hypothetical protein HMPREF9290_0077 [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 376

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174
           +G DIS +A+ +AK+NA+  GV E    ++ D  S       + +++SNPPY
Sbjct: 254 LGSDISGRAISLAKNNALNAGVEEDIAFVKRDVSSLAISRDDYGILISNPPY 305


>gi|210621882|ref|ZP_03292879.1| hypothetical protein CLOHIR_00824 [Clostridium hiranonis DSM 13275]
 gi|210154513|gb|EEA85519.1| hypothetical protein CLOHIR_00824 [Clostridium hiranonis DSM 13275]
          Length = 248

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           + E  +V  IL+L  GTG + + L K+   +   G+DIS + LE+A   A   GV 
Sbjct: 32  KSEGAEVQNILELACGTGNLTIPLTKKG--YDIAGIDISAEMLEVAMEKAEEEGVQ 85


>gi|113476020|ref|YP_722081.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110167068|gb|ABG51608.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 439

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           ILD   G+G   L L + +P  K VG+DIS K++E+A+     +G  +  F  L  +   
Sbjct: 61  ILDAACGSGYKSLVLAEANPGAKIVGIDISEKSVELARQRLQYHGFDNAEFHVLSIEELP 120

Query: 160 SVEGLFDVI 168
           S+   FD I
Sbjct: 121 SLGLKFDYI 129


>gi|300725122|ref|YP_003714450.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061]
 gi|297631667|emb|CBJ92380.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061]
          Length = 234

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L++G G+G + +         + V +DI+  A+     NA+ +GV  +     SD FS
Sbjct: 69  RMLEVGCGSGVISVTAALNG-VSEVVALDINPNAVTNTLRNAIRHGVETKVSARVSDVFS 127

Query: 160 SVEGL--FDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           ++E    FD+I  N P  Y++        L    FDP           +  R +  G S 
Sbjct: 128 ALEMTEDFDLIFWNVPWTYVDGDFDMASELHAAVFDPE---------YAGQRRLIQGASA 178

Query: 216 HLNKDG 221
           +L K+G
Sbjct: 179 YLRKNG 184


>gi|297156192|gb|ADI05904.1| UbiE family methyltransferase [Streptomyces bingchenggensis BCW-1]
          Length = 280

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +RILD+G G G +   L +  P  + +GVD +   LE A+S A   GVS
Sbjct: 51  MRILDIGCGPGTITADLAELVPQGEVIGVDTAPDVLEQARSVAAERGVS 99


>gi|295698692|ref|YP_003603347.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia
           pediculicola USDA]
 gi|291157413|gb|ADD79858.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia
           pediculicola USDA]
          Length = 188

 Score = 35.8 bits (81), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 10/93 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F    L +    F PR     L+D+    S+  +E +   +ILDL TG+G + ++    +
Sbjct: 101 FCEHELYVDERVFIPRSPISELIDNNFE-SIINVEPK---KILDLCTGSGCIAISC---A 153

Query: 120 PFFKGVGV---DISCKALEIAKSNAVTNGVSER 149
             FK   +   DIS +ALE+A+ N   + +SER
Sbjct: 154 HIFKNSEIEASDISREALEVARKNIELHSLSER 186


>gi|331091196|ref|ZP_08340037.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404643|gb|EGG84182.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 189

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 10/117 (8%)

Query: 64  RLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           RL L + D  E RP T+ + ++      P +        LDL +G+G + +  L      
Sbjct: 10  RLQLKTLDGLETRPTTDRIKETLFNMISPYLCD---CMFLDLFSGSGGIGIEALSRGAK- 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174
           + V V+ + KA++  K N     + ++  T+Q+D  ++++ L     FD I  +PPY
Sbjct: 66  EAVFVENNPKAMQYIKENLAFTKLDKKAVTMQTDVITALKRLEGTTQFDYIFMDPPY 122


>gi|320100238|ref|YP_004175830.1| methyltransferase small [Desulfurococcus mucosus DSM 2162]
 gi|319752590|gb|ADV64348.1| methyltransferase small [Desulfurococcus mucosus DSM 2162]
          Length = 217

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 22/191 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L    D + P        D+ LA  L    K      +DLG G+G + L  L +    
Sbjct: 1   MKLVFVGDVYRPSD------DTWLALKLLDSLKPKAGLCVDLGCGSGILGLYGLIKGYCE 54

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V VDI   AL     N   N    R   + SD  + + G  D++++NPPY+ +     
Sbjct: 55  RTVFVDIDEDALATTLRNIPLNNAQARSIVVSSD-NAVLHGAADLVLANPPYLPAA---- 109

Query: 183 LGLEVRDFDPRISLDGGIDGLS---HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              E +  D   + +GG+ G     H+  +A  V   L   GL  +         VV   
Sbjct: 110 ---EGKVLDA--ATEGGVHGYEAVLHFINVAHEV---LRPGGLLILVYSSLSNQLVVEEH 161

Query: 240 ESRKLFLVNAF 250
            SRK F + AF
Sbjct: 162 LSRKGFTMVAF 172


>gi|308803496|ref|XP_003079061.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri]
 gi|116057515|emb|CAL51942.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri]
          Length = 811

 Score = 35.8 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)

Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++D G G+G + + ALL  +   + VGVD++ +A++ +  NA  NGV  R  T   D   
Sbjct: 670 VVDFGCGSGVLAIGALLLGAE--RAVGVDLARQAVQSSMDNAKLNGVEHRLSTFLGDGTD 727

Query: 160 ----SVEGLFDVIVSN 171
                  G  DV+++N
Sbjct: 728 PGTPGANGQADVVIAN 743


>gi|109946712|ref|YP_663940.1| hypothetical protein Hac_0080 [Helicobacter acinonychis str.
           Sheeba]
 gi|109713933|emb|CAJ98941.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 238

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           FS P I+      ILD+G+G G + L   +++P      V+   K    ++ NA+    +
Sbjct: 27  FSCPLIKNSGA--ILDIGSGCGILGLLCARDNPLASVHLVEKDSKMAFCSQKNALKFPNT 84

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + F++   D+   +  L+DV+V NPP+
Sbjct: 85  QVFESNFLDFNPPI--LYDVVVCNPPF 109


>gi|66356834|ref|XP_625595.1| conserved methylase [Cryptosporidium parvum Iowa II]
 gi|46226592|gb|EAK87580.1| conserved methylase [Cryptosporidium parvum Iowa II]
 gi|323508673|dbj|BAJ77230.1| cgd5_4330 [Cryptosporidium parvum]
 gi|323509801|dbj|BAJ77793.1| cgd5_4330 [Cryptosporidium parvum]
          Length = 227

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 57  WRDFYNVRLTLSSDT-FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           W +FY   L   +D  +      E  +D+ + + +    +    R+LD+G G G   + L
Sbjct: 17  WEEFYENELDSYNDVGYRGEEWFEDYIDAIVDWVMETGCEVQSGRVLDIGCGNGLFLIDL 76

Query: 116 LKESPFFKGVGVDISCKALEIAK 138
           ++   F   VG+D    A+E+AK
Sbjct: 77  IRNINFSSAVGIDYIPSAIELAK 99


>gi|290476761|ref|YP_003469672.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           bovienii SS-2004]
 gi|289176105|emb|CBJ82910.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           bovienii SS-2004]
          Length = 293

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 29/164 (17%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  ++  D+    ++D G G+G + +A LK   
Sbjct: 122 PEPDAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLTGKTVIDFGCGSGILAIAALKLG- 180

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +G+DI  +A++ ++ NA  NGVS +  TL        +   D++++N         
Sbjct: 181 AKQAIGIDIDPQAIQASRDNAERNGVSAQL-TLYLSKNQPADLKCDIVIAN--------- 230

Query: 181 DCLGLEVRDFDPRIS---LDGGIDGLSH-YRTIADGVSRHLNKD 220
             L   +R+  P I      GG  GLS    + A+GV +  N +
Sbjct: 231 -ILAGPLRELAPIIGSLPKSGGFLGLSGVLASQAEGVVQAYNNE 273


>gi|268323570|emb|CBH37158.1| hypothetical protein, containing methyltransferase domain
           [uncultured archaeon]
          Length = 225

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 101 ILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLG G G + +   LL      + VG+D   +A+E+A++N+   GV+  F        
Sbjct: 79  VYDLGCGNGILGIGAKLLGAK---EVVGIDSDLRAIEVARANSERIGVAVEFKRCDV--- 132

Query: 159 SSVEGLFDVIVSNPPY 174
             VEG  D +V NPP+
Sbjct: 133 RDVEGTGDTVVMNPPF 148


>gi|94499206|ref|ZP_01305744.1| hypothetical protein RED65_10469 [Oceanobacter sp. RED65]
 gi|94428838|gb|EAT13810.1| hypothetical protein RED65_10469 [Oceanobacter sp. RED65]
          Length = 315

 Score = 35.8 bits (81), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 8/88 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE-----IAKSNAVTNGVSERFDTL 153
           V  LD+GTG   +   L      +K V  DI  K+++     I  + A++N +  R  T 
Sbjct: 106 VTALDIGTGASCIYSLLGNRIYDWKMVASDIDPKSIDNANAIIKANQALSNQIDCRLQTS 165

Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESV 178
           +   F ++   +  FD+ + NPP+ ES+
Sbjct: 166 EKYIFRNIIHNDEYFDITLCNPPFHESI 193


>gi|288800827|ref|ZP_06406284.1| RNA methyltransferase, RsmD family [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332288|gb|EFC70769.1| RNA methyltransferase, RsmD family [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 181

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 35/180 (19%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDI 129
           TF+ RP T+   ++        I+  D  R LDL  GTG++ + LL +E+ +  G+ +D 
Sbjct: 18  TFKARPTTDFAKENIFNVLNGYIDFEDC-RALDLFAGTGSISIELLSREAQYVVGLELDR 76

Query: 130 -SCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGL 185
             C  +       +    ++ +  ++ D F    S    FD+I ++PPY          L
Sbjct: 77  DHCTFIR----QCIDKLGADNYSLIRGDVFRYLKSCRETFDLIFADPPY---------AL 123

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +  +  P+I LD GI                L++DG+  +E G +   +    F  R+ +
Sbjct: 124 KNLEEIPQIVLDKGI----------------LSEDGIFVLEHGKHNNFEQHPCFLERRAY 167


>gi|163748711|ref|ZP_02155964.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99]
 gi|161331821|gb|EDQ02625.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99]
          Length = 293

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++D G G+G + +A LK     K  G+DI  +A+E +K+NA  N V +R 
Sbjct: 161 EVIDFGCGSGILAVAALKLGAK-KVTGIDIDYQAIEASKANAERNDVQDRL 210


>gi|86749135|ref|YP_485631.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris HaA2]
 gi|86572163|gb|ABD06720.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris HaA2]
          Length = 296

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 9/77 (11%)

Query: 101 ILDLGTGTGAVCLALLK--ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LDLGTGTG + +A  K    P       DI  +++ +A+ NA  NGV        +  F
Sbjct: 158 VLDLGTGTGVLAIAAAKALRQPVLA---TDIDRQSVAVARENARLNGVGNLVHAEWATGF 214

Query: 159 SS----VEGLFDVIVSN 171
           +S        FD++++N
Sbjct: 215 ASPAFAAHAPFDLVLAN 231


>gi|330503669|ref|YP_004380538.1| pcaF-2 [Pseudomonas mendocina NK-01]
 gi|328917955|gb|AEB58786.1| pcaF-2 [Pseudomonas mendocina NK-01]
          Length = 401

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH---------YRTIADGVSR 215
            DVI  N  +    I  C  L ++D DPR++ +GG   + H           T  + + R
Sbjct: 317 MDVIEFNEAFASQAIAVCRRLGLQDDDPRVNPNGGAIAIGHPLGASGARLVTTALNQLER 376

Query: 216 HLNKDGLCSVEIGYNQKVDVV 236
              +  LCS+ +G  Q V ++
Sbjct: 377 QQGRYALCSMCVGVGQGVALI 397


>gi|307103327|gb|EFN51588.1| hypothetical protein CHLNCDRAFT_59200 [Chlorella variabilis]
          Length = 437

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           V ++D G G+G + +A L        VG DI   A++  ++NA  NGV+ER    Q
Sbjct: 236 VSVMDYGAGSGVLAVAALLMG-AAHAVGTDIEPLAVKSTQANAALNGVAERLAAYQ 290


>gi|301616799|ref|XP_002937838.1| PREDICTED: methyltransferase-like protein 10-like [Xenopus
           (Silurana) tropicalis]
          Length = 220

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
              ILD+GTG G + + L K S +    G+D S  A+E+AKS     GVS+
Sbjct: 60  TASILDIGTGNGMLLVELAK-SGYCNLTGIDYSSDAVELAKSICEKEGVSQ 109


>gi|157148837|ref|YP_001456156.1| ribosomal protein L11 methyltransferase [Citrobacter koseri ATCC
           BAA-895]
 gi|166223406|sp|A8AQF7|PRMA_CITK8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157086042|gb|ABV15720.1| hypothetical protein CKO_04670 [Citrobacter koseri ATCC BAA-895]
          Length = 293

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 17/108 (15%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAERNGVSERLELYLPKDQPE 220

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204
           +++   DV+V+N           L   +R+  P IS   ++ G+ GLS
Sbjct: 221 AMKA--DVVVAN----------ILAGPLRELAPLISVLPVESGLLGLS 256


>gi|86130776|ref|ZP_01049375.1| methyltransferase [Dokdonia donghaensis MED134]
 gi|85818187|gb|EAQ39347.1| methyltransferase [Dokdonia donghaensis MED134]
          Length = 272

 Score = 35.8 bits (81), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L L +         V++   A E A  N   +   +R     +   ++
Sbjct: 42  ILDIGTGTGVIALMLAQRCDAQTIDAVELDDNAYEQATENFENSDWGDRLFCYHAHLYEF 101

Query: 158 FSSVEGLFDVIVSNPPY 174
            + V+  +D+IV NPP+
Sbjct: 102 AAEVDDEYDLIVCNPPF 118


>gi|329934279|ref|ZP_08284358.1| O-methyltransferase [Streptomyces griseoaurantiacus M045]
 gi|329305875|gb|EGG49730.1| O-methyltransferase [Streptomyces griseoaurantiacus M045]
          Length = 346

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  ++D+G   G + LAL++  P  +G  +D+   A+E A   A   G+S+RF     D+
Sbjct: 181 VSTVIDVGGADGHLVLALMEARPELRGQVLDLP-HAVEGAVEEAARRGLSDRFSGAAGDF 239

Query: 158 FSSV 161
           F+ V
Sbjct: 240 FAEV 243


>gi|310778972|ref|YP_003967305.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM
           2926]
 gi|309748295|gb|ADO82957.1| 23S rRNA m(6)A-1618 methyltransferase [Ilyobacter polytropus DSM
           2926]
          Length = 299

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-- 152
           KR  V++LD+GTG   +   +  +S  +  V  +I  K++E AK    +N V +   T  
Sbjct: 99  KRKGVKVLDIGTGANCIYPIIGSQSYNWDFVASEIDPKSIENAKKIVNSNKVLKNKITLK 158

Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESV 178
           LQ +  +  EG+      FD+ + NPP+  S+
Sbjct: 159 LQKNRENIFEGIIEKNDKFDLTMCNPPFHASL 190


>gi|195576207|ref|XP_002077968.1| GD22788 [Drosophila simulans]
 gi|194189977|gb|EDX03553.1| GD22788 [Drosophila simulans]
          Length = 219

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 29/52 (55%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++  R+LDLG G G   + L  E       GVD S KA+E+A++ A  N +S
Sbjct: 58  KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAQDNKLS 109


>gi|170291070|ref|YP_001737886.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175150|gb|ACB08203.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 307

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD   G G + L +L  S   + +GVDI+ K +  AK+N +T G  E ++    D  S 
Sbjct: 161 VLDPFLGVGGIALEIL--SVGARLIGVDINEKLVIQAKNNLMTYGFLEGYELRVGDALSL 218

Query: 161 VEGL-FDVIVSNPPY 174
             G+  D IV++PPY
Sbjct: 219 ELGVRVDRIVTDPPY 233


>gi|82749813|ref|YP_415554.1| hypothetical protein SAB0036 [Staphylococcus aureus RF122]
 gi|82655344|emb|CAI79724.1| hypothetical protein SAB0036 [Staphylococcus aureus RF122]
          Length = 243

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R +  + +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIV 169
           ++  +         G FD IV
Sbjct: 72  QYSDIYQ--LPETMGHFDAIV 90


>gi|15807395|ref|NP_296126.1| ubiquinone/menaquinone biosynthesis methyltransferase [Deinococcus
           radiodurans R1]
 gi|41019470|sp|Q9RRT0|UBIE_DEIRA RecName: Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|6460221|gb|AAF11949.1|AE002071_3 ubiquinone/menaquinone biosynthesis methyltransferase [Deinococcus
           radiodurans R1]
          Length = 241

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R+LD+ TGTG   + L + +P  + VG D   + L++A+  A    +S RF+
Sbjct: 60  RVLDVATGTGDFAIELKERAPQVEIVGSDFVPQMLDLARQKAGAKQLSIRFE 111


>gi|329848573|ref|ZP_08263601.1| methyltransferase small domain protein [Asticcacaulis biprosthecum
           C19]
 gi|328843636|gb|EGF93205.1| methyltransferase small domain protein [Asticcacaulis biprosthecum
           C19]
          Length = 229

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + L+LG G G   L+L    P     G++       +A+ NA  NG +E    ++ D  +
Sbjct: 28  KALELGCGAGGAILSLKARCPDLALTGIEREPVYAGLARENAALNGNAE-VTVIEGDIGA 86

Query: 160 SVE--GL--FDVIVSNPPYIE 176
             +  GL  FD++ SNPP+ +
Sbjct: 87  GFKTFGLDRFDLVFSNPPFFD 107


>gi|315225236|ref|ZP_07867053.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287]
 gi|314944919|gb|EFS96951.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287]
          Length = 240

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDW 157
           ILD+G GTG + L L + S       V+I  KA      N   +   +R   +     ++
Sbjct: 38  ILDIGAGTGLLSLMLAQRSDAVVIDAVEIDEKAYIECTENFEESQWGDRLFCYHASFQEF 97

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              ++ ++D+I+SNPP+  +   D    E      R +     D LS +  + +GVS+ L
Sbjct: 98  ALEIDEVYDLIISNPPFYTA---DYKTAEKARNTARFT-----DTLS-FSELLEGVSQLL 148

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           + +G+ SV + Y++    + +     LF
Sbjct: 149 SDEGVFSVILPYSETEGFIALASGYGLF 176


>gi|313678340|ref|YP_004056080.1| type I restriction-modification system, M subunit [Mycoplasma bovis
           PG45]
 gi|312950090|gb|ADR24685.1| type I restriction-modification system, M subunit [Mycoplasma bovis
           PG45]
          Length = 892

 Score = 35.8 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P   +EL+    +A+ L   + R+V+++ D  +G+G++ + +  E   +     
Sbjct: 210 AGEFYTPHKVSELM-SKIIAYHL---KDREVIKVYDPTSGSGSLLITIGHEFKKYNNGDS 265

Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166
            +S  A E+        + N +   +S         DTL+ DW       FSS + L  D
Sbjct: 266 PVSYYAQELKAEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFEDNDFSSYKHLSVD 325

Query: 167 VIVSNPPY 174
            +VSNPPY
Sbjct: 326 AVVSNPPY 333


>gi|68249563|ref|YP_248675.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           86-028NP]
 gi|81336008|sp|Q4QLT2|PRMA_HAEI8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|68057762|gb|AAX88015.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           86-028NP]
          Length = 295

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  ++ NA  NGV +R     SD   S
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRDNAEQNGVVDRLQLFLSDEKPS 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 -DLKADVVVAN 230


>gi|152976525|ref|YP_001376042.1| biotin biosynthesis protein BioC [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025277|gb|ABS23047.1| biotin biosynthesis protein BioC [Bacillus cytotoxicus NVH 391-98]
          Length = 285

 Score = 35.8 bits (81), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 90  LPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L ++EKR      +RIL+LG GTG +   L+   P  +   +D +   + +AK     + 
Sbjct: 33  LSQLEKRYSKAAAIRILELGCGTGYITEKLVHLFPNAQITAIDFAESMIAVAKQRRHVDE 92

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           V+ R + ++      ++  +DVI+SN  +
Sbjct: 93  VTFRCEDIEK---LILDDFYDVIISNATF 118


>gi|323440388|gb|EGA98101.1| hypothetical protein SAO11_0832 [Staphylococcus aureus O11]
          Length = 243

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R +  + +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIV 169
           ++  +         G FD IV
Sbjct: 72  QYSDIYQ--LPETMGHFDAIV 90


>gi|294656777|ref|XP_459095.2| DEHA2D14190p [Debaryomyces hansenii CBS767]
 gi|199431737|emb|CAG87263.2| DEHA2D14190p [Debaryomyces hansenii]
          Length = 278

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALE 135
           E+ L V      SL  +++ +VV  +DLG+G G  V LA  K  P  K +G+D+  + ++
Sbjct: 51  ESNLGVSCGNPLSLANLKEGEVV--VDLGSGGGIDVFLAAKKVGPHGKSIGIDMLKEMIK 108

Query: 136 IAKSNAVTNGVS 147
           +A++NA   G +
Sbjct: 109 VARTNAEKGGYT 120


>gi|152982874|ref|YP_001355335.1| UbiE/COQ5 family methlytransferase [Janthinobacterium sp.
           Marseille]
 gi|151282951|gb|ABR91361.1| methlytransferase, UbiE/COQ5 family [Janthinobacterium sp.
           Marseille]
          Length = 281

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 100 RILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD+G GTG+  LA+ ++  P    VG+DIS + +  A+++A   G++  F    +  +
Sbjct: 52  RVLDVGCGTGSTTLAVSRQLGPQGLCVGIDISQQMIAAAQASAKAQGLASGFICADAQTY 111

Query: 159 SSVEGLFDVIVS 170
           +     FD+I+S
Sbjct: 112 AFAAASFDLIIS 123


>gi|194367355|ref|YP_002029965.1| sun protein [Stenotrophomonas maltophilia R551-3]
 gi|194350159|gb|ACF53282.1| sun protein [Stenotrophomonas maltophilia R551-3]
          Length = 443

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
            R+LD     G     LL+  P  + + +DI  + L  A+   +  GV E   TL +D  
Sbjct: 254 ARVLDACAAPGGKSAHLLERDPSLRLLALDIDARRLARARDTYIRTGVGEHVQTLAADAS 313

Query: 157 ----WFSSVEGLFDVIVSNPP 173
               W+  V   FD I+ + P
Sbjct: 314 DPGSWWDGVP--FDAILLDAP 332


>gi|325662012|ref|ZP_08150631.1| hypothetical protein HMPREF0490_01369 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471675|gb|EGC74894.1| hypothetical protein HMPREF0490_01369 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 238

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D + + D+GT  G + +AL++E    + V +DI+   L+ A+++     +SE+ DT +SD
Sbjct: 17  DGMVVADIGTDHGYIPIALVQEGRCPRAVAMDINIGPLDRARAHIQAAELSEKIDTRRSD 76

Query: 157 WFSSVEG 163
               ++ 
Sbjct: 77  GMKELKA 83


>gi|195342145|ref|XP_002037662.1| GM18180 [Drosophila sechellia]
 gi|194132512|gb|EDW54080.1| GM18180 [Drosophila sechellia]
          Length = 219

 Score = 35.8 bits (81), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 36/79 (45%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LDLG G G   + L  E       GVD S KA+E+A++ A  N +S  +     
Sbjct: 58  KEASRVLDLGCGNGMFLVGLANEGFTGDLTGVDYSPKAVELAQNIAQDNKLSITYKVADL 117

Query: 156 DWFSSVEGLFDVIVSNPPY 174
                  G FDV+     Y
Sbjct: 118 TQPQDELGHFDVVHDKGTY 136


>gi|327401522|ref|YP_004342361.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6]
 gi|327317030|gb|AEA47646.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6]
          Length = 252

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 11/70 (15%)

Query: 89  SLPRIEKRDV--------VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           SLP +  RDV        ++ILD+GTGTG   LAL+      + VG+D+S   LE+AK  
Sbjct: 31  SLPEVW-RDVLASVFERRMQILDVGTGTG--FLALILAELGHEVVGIDLSKGMLEVAKKK 87

Query: 141 AVTNGVSERF 150
           A   GV   F
Sbjct: 88  ARKLGVDVEF 97


>gi|288919872|ref|ZP_06414195.1| O-methyltransferase family 2 [Frankia sp. EUN1f]
 gi|288348704|gb|EFC82958.1| O-methyltransferase family 2 [Frankia sp. EUN1f]
          Length = 361

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G     + +L+  P  +G+ VD+    +  A++ A T+GV++R +     +  +
Sbjct: 185 VLDLGAGAAPWAIGMLQVWPRARGLAVDLPSI-IPFAQAAAATHGVADRLEVRAGSYLDA 243

Query: 161 V 161
           V
Sbjct: 244 V 244


>gi|284048610|ref|YP_003398949.1| methyltransferase small [Acidaminococcus fermentans DSM 20731]
 gi|283952831|gb|ADB47634.1| methyltransferase small [Acidaminococcus fermentans DSM 20731]
          Length = 409

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG   L   K         VDIS +AL+ A+ N   NG+ ++  T++++ F  
Sbjct: 237 VLDCFTHTGPFALNAAKGGAA-SVTAVDISGEALKRARDNFALNGLEDKIQTVEANVFEY 295

Query: 161 VEGL-------FDVIVSNPP 173
           +  L       FD I+ +PP
Sbjct: 296 LTDLENKKQHPFDFIILDPP 315


>gi|237730176|ref|ZP_04560657.1| ribosomal protein L11 methyltransferase [Citrobacter sp. 30_2]
 gi|226908782|gb|EEH94700.1| ribosomal protein L11 methyltransferase [Citrobacter sp. 30_2]
          Length = 293

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +GVDI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAQRNGVSERLELYLPKDQPE 220

Query: 160 SVEGLFDVIVSN 171
           +++   DV+V+N
Sbjct: 221 AMKA--DVVVAN 230


>gi|225405322|ref|ZP_03760511.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme
           DSM 15981]
 gi|225043146|gb|EEG53392.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme
           DSM 15981]
          Length = 428

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R+LD  T TG+  L A L  +   +  GVD S  A++ A  NA  NG+S+R   L +D F
Sbjct: 253 RVLDCFTHTGSFALNAGLAGAG--QVTGVDASQLAVDQAAENAALNGLSDRVSFLCADVF 310

Query: 159 SSVEGL------FDVIVSNPP 173
             +  L      +DV++ +PP
Sbjct: 311 DLLPKLEKDGERYDVVILDPP 331


>gi|310795101|gb|EFQ30562.1| methyltransferase domain-containing protein [Glomerella graminicola
           M1.001]
          Length = 296

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           L +D  L  S  R   +   R+LDLGTGTG   +      P  + +GVD+S    E+  +
Sbjct: 57  LTLDGELGTSPGRHTAK---RVLDLGTGTGIWAIDFADAHPSAEVIGVDLSAIQPELLPA 113

Query: 140 NAVTNGVSERFDTLQSDW 157
           N      S   D L+ DW
Sbjct: 114 N-----CSFEIDDLELDW 126


>gi|296411178|ref|XP_002835311.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629088|emb|CAZ79468.1| unnamed protein product [Tuber melanosporum]
          Length = 281

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 15/171 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLV-----DSALA-FSLPRIEKRDVVRILDLGTGTGAVCLA 114
           ++   TL S  F   P  E  V     D+ L   S  R    +    LD+GTG G +   
Sbjct: 53  WDETYTLESQNFNADPANEGHVWFSESDAELRILSFLRRIAPEARSFLDIGTGNGHLLFE 112

Query: 115 LLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           +++E  +  G  VGVD S  A+ +A+S A   GV E        W + +  L D  V   
Sbjct: 113 IVEEGSWDGGLFVGVDYSDGAVALARSIAKGRGVEEGKVAF---WVADILALGDGEVEAE 169

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGG--IDGLSHYRTIADGVSRHLNKDG 221
            ++     D   L+   FD  ISL  G   DG   Y   A+ V R + + G
Sbjct: 170 EWVPRGGFDVC-LDKGTFDA-ISLGDGRLPDGRRVYEGYAERVVRVMKRGG 218


>gi|262163831|ref|ZP_06031571.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223]
 gi|262027811|gb|EEY46476.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223]
          Length = 295

 Score = 35.8 bits (81), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV  + +  L  D  +
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVENQIEVYLPKDQPA 221

Query: 160 SVEGLFDVIVSN 171
            +  + DV+V+N
Sbjct: 222 GL--VADVVVAN 231


>gi|325688980|gb|EGD30988.1| methyltransferase domain protein [Streptococcus sanguinis SK115]
          Length = 228

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  LD+G G G  C+ L   S +F+ V G+D+S   L+IAK + V     +  + LQ D+
Sbjct: 40  VSALDIGCGGGNTCIFL---SSYFQHVTGIDLSADFLQIAK-DKVEKEDLQNVELLQDDF 95

Query: 158 FSSV-EGLFDVIVS 170
            ++V E  FD I S
Sbjct: 96  LTAVFEKQFDFIFS 109


>gi|307180237|gb|EFN68270.1| Putative methyltransferase METT10D [Camponotus floridanus]
          Length = 763

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 95  KRDVVRILDLGTGTGAVCL-ALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSE--RF 150
           K D+ +I  +  GTGA+C+ ALL    + +  +G ++  K++E A+   + N +    + 
Sbjct: 329 KLDMNKITGIDIGTGAICIYALLLAKIYGYHMIGTEVDKKSIEYAEKCIIKNNLENLIKV 388

Query: 151 DTLQSD--WFSSVE--GLFDVIVSNPPYIES 177
            T+ SD  +  +VE   ++D  + NPP+ E+
Sbjct: 389 VTVNSDRIFKDAVEDDKIYDFSMCNPPFFEN 419


>gi|303240654|ref|ZP_07327168.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2]
 gi|302591722|gb|EFL61456.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2]
          Length = 235

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAV 142
           A+  +LP     D   ++DLG GTG +  A+    P  K   VDIS K L+IA  K N V
Sbjct: 41  AIVNTLPFSRSEDF-EVIDLGCGTGTISRAVKDAYPKAKITCVDISGKMLQIAAGKLNDV 99

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSN 171
            + +      + SD++    G  +DV+VS+
Sbjct: 100 QDAI-----YINSDFYEFNFGRKYDVVVSS 124


>gi|260914497|ref|ZP_05920966.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC
           43325]
 gi|260631598|gb|EEX49780.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC
           43325]
          Length = 293

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV+++    L +D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-SAVGIDIDPQAILASRNNAEQNGVADKLQLFLSAD--K 218

Query: 160 SVEGLFDVIVSN 171
            V+   DV+V+N
Sbjct: 219 PVDLKADVVVAN 230


>gi|171779403|ref|ZP_02920367.1| hypothetical protein STRINF_01248 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282020|gb|EDT47451.1| hypothetical protein STRINF_01248 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 850

 Score = 35.8 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 25/123 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  LL+   +A     ++ R+ ++I D  +G+G++ + + K +  +     +I   A E+
Sbjct: 192 EVSLLMSEIVA---EHLKDRESIKIYDPTSGSGSLLINIGKSASKYISNKDNIKYYAQEL 248

Query: 137 AKS-------NAVTNG------VSERFDTLQSDW--------FSSVEGLF-DVIVSNPPY 174
            ++       N V  G      V+   DTL+ DW         ++ E L+ D +VSNPPY
Sbjct: 249 KQNTYNLTRMNLVMRGILPDNIVTRNGDTLEDDWPYFDDKDPIATYEPLYVDAVVSNPPY 308

Query: 175 IES 177
            +S
Sbjct: 309 SQS 311


>gi|170289748|ref|YP_001736564.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173828|gb|ACB06881.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 193

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)

Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + DLG G G + + ALL  +     +G+D+  +A+EIAK NA   G+  R   L  D   
Sbjct: 42  VADLGCGNGILAIGALLYGAS--SAIGIDLDPEAIEIAKRNADRLGLLGRARFLVMDVRD 99

Query: 160 SVEGLFDVIVSNPPY 174
             E + D ++ NPP+
Sbjct: 100 FSEEV-DTVIQNPPF 113


>gi|167839725|ref|ZP_02466409.1| hypothetical protein Bpse38_23849 [Burkholderia thailandensis
           MSMB43]
          Length = 269

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 13/110 (11%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFF 122
           RL   S+    +P T  L++SA          R  +R+LD+G GTG V  LA     P  
Sbjct: 15  RLDFQSEML--KPVTRRLLESA--------RLRPSMRVLDIGCGTGGVSMLAAEMAGPTG 64

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSN 171
             V +D S  A+E A +NA    +   RF     D      G FDV+V+ 
Sbjct: 65  TVVAIDPSDVAIEAASANAERASLHNIRFRASGLDQVEGAHG-FDVVVAR 113


>gi|146342484|ref|YP_001207532.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium
           sp. ORS278]
 gi|146195290|emb|CAL79315.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium
           sp. ORS278]
          Length = 298

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+LDLGTGTG + +A  K +     +G DI   ++ +A+ NA  NG       +++
Sbjct: 159 RVLDLGTGTGVLAIAAAKAT-RRSVLGSDIDAPSVSVARENARLNGAGPLVQVIRA 213


>gi|114771788|ref|ZP_01449181.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium
           HTCC2255]
 gi|114547604|gb|EAU50495.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium
           HTCC2255]
          Length = 396

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+ +  G   LA L        + VD S  AL++A   A  +G S+ F T + D F  
Sbjct: 225 IIDVFSHVGGFSLAALSAGAT-SAIAVDSSQPALDLAIKGADASGFSKSFSTRKGDAFEV 283

Query: 161 VEGLFD------VIVSNPP 173
           +  LFD      V+V +PP
Sbjct: 284 MAQLFDEGERYQVVVCDPP 302


>gi|323443132|gb|EGB00751.1| hypothetical protein SAO46_0921 [Staphylococcus aureus O46]
          Length = 243

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVS 147
           L R +  + +R+LD+G  TG V + L+ +     G  VGVD++   L+IA  N   N VS
Sbjct: 12  LDRAQIEEGMRVLDIGCATGEV-IQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVS 70

Query: 148 ERFDTLQSDWFSSVEGLFDVIVS 170
            ++  +         G FD IV 
Sbjct: 71  YQYSDIYQ--LPETMGHFDAIVG 91


>gi|322709409|gb|EFZ00985.1| Putative S-adenosylmethionine-dependent methyltransferase of the
           seven beta-strand family [Metarhizium anisopliae ARSEF
           23]
          Length = 226

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D+   R  T+ L   + A +L     RD   +LDLG G G++  AL +E    + +GVD 
Sbjct: 29  DSDAERKTTQFLDSLSAAAAL----DRDTASVLDLGCGNGSMLFALREEGWTGRALGVDY 84

Query: 130 SCKALEIAK 138
           S +++ +A+
Sbjct: 85  SPQSVALAR 93


>gi|219565266|dbj|BAH04163.1| putative SAM-dependent methyltransferase [Streptomyces
           triostinicus]
          Length = 232

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G GTG   L L  +   +   G+D+S +A+ IA+  A   G+   F    +   + 
Sbjct: 56  VLDAGCGTGEDILHLAGKG--YAVTGLDLSSEAVAIARRKAEERGLDATFAVANALELAG 113

Query: 161 VEGLFDVIV 169
            EG FD +V
Sbjct: 114 YEGRFDTVV 122


>gi|118468119|ref|YP_886428.1| methyltransferase type 12 [Mycobacterium smegmatis str. MC2 155]
 gi|118169406|gb|ABK70302.1| methyltransferase type 12 [Mycobacterium smegmatis str. MC2 155]
          Length = 211

 Score = 35.8 bits (81), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           R+LD+G G G   + L +    +  +G+D S +A+E+A+ NA   GV  RF
Sbjct: 42  RVLDVGCGAGEHTILLTRLG--YDVLGIDFSPQAIEMARENARGRGVDARF 90


>gi|296104818|ref|YP_003614964.1| putative ribosomal RNA large subunit methyltransferase G
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059277|gb|ADF64015.1| putative ribosomal RNA large subunit methyltransferase G
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 378

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWF 158
           I+DLG G G + L LL ++P    V  D S  A+  ++ N  TN     +R + + ++  
Sbjct: 232 IVDLGCGNGVIGLTLLAKNPQASVVFSDESPMAVASSRLNVETNMPEALDRCEFMINNAL 291

Query: 159 SSVEGL-FDVIVSNPPY 174
           S VE   F+ +  NPP+
Sbjct: 292 SGVEPFRFNAVFCNPPF 308


>gi|281413892|ref|ZP_06245634.1| 16S RNA G1207 methylase RsmC [Micrococcus luteus NCTC 2665]
          Length = 401

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 1/89 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G + +   +  P    +  D S  A+    + A  N V++R   +
Sbjct: 254 DPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVASTLATARANRVADRVRAV 313

Query: 154 QSDWFSS-VEGLFDVIVSNPPYIESVIVD 181
           + D  ++  +G  + ++ NPP+ +   VD
Sbjct: 314 RDDALATWPDGTEECVLMNPPFHDGNAVD 342


>gi|238916967|ref|YP_002930484.1| hypothetical protein EUBELI_01036 [Eubacterium eligens ATCC 27750]
 gi|238872327|gb|ACR72037.1| Hypothetical protein EUBELI_01036 [Eubacterium eligens ATCC 27750]
          Length = 186

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDL  G+GA+ +  L      + V V+ +  AL + K N     +  +   ++ D  S
Sbjct: 44  RFLDLYAGSGAIGIEALSRGAK-EAVLVENARAALAVIKDNLAFTKLDSKAVIMEQDVLS 102

Query: 160 SV-----EGLFDVIVSNPPYIESVIVDCL 183
           ++     +G+FD+I  +PPY +    D L
Sbjct: 103 AINRLAGKGVFDIIFMDPPYGKDYEYDVL 131


>gi|226359905|ref|YP_002777683.1| hypothetical protein ROP_04910 [Rhodococcus opacus B4]
 gi|226238390|dbj|BAH48738.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 495

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +DT    P   ++   A+  +L  ++ R V+   DLG G+G +  ALL ++ F +    D
Sbjct: 286 NDTVAAAPPLNVIRREAVLGALGELDARTVI---DLGCGSGQLVSALLDDARFTEIAAAD 342

Query: 129 ISCKALEIAKSNAVTNGVSER 149
           +S +AL IA      + + ER
Sbjct: 343 VSTRALSIAARRLQLDRMPER 363


>gi|163803356|ref|ZP_02197233.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4]
 gi|159172869|gb|EDP57709.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4]
          Length = 341

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP++  R    +LD G G G +   + K +P       DI+  A+  +++    N +S 
Sbjct: 196 TLPKLSGR----VLDFGCGAGVLGAFMAKANPEITIDMCDINAYAITSSQATLKANDISG 251

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +     SD +S     +  I+SNPP+
Sbjct: 252 Q--VFASDIYSDTANDYRFIISNPPF 275


>gi|156337258|ref|XP_001619839.1| hypothetical protein NEMVEDRAFT_v1g223766 [Nematostella vectensis]
 gi|156203785|gb|EDO27739.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ L++G G GA+ +    + P  +    DI+  A++    NA  +GV      +Q+D F
Sbjct: 75  LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVF 134

Query: 159 --SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD--PRISLDGGIDGLSHYRTIADG 212
               ++G+ FD+I   PP        C G   +D D   R + D     L  Y   A G
Sbjct: 135 DCDDLKGMKFDMIFFRPP-----AGFCEGCNEKDLDMSSRTAWDPNYSILERYLKGARG 188


>gi|288928551|ref|ZP_06422398.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288331385|gb|EFC69969.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 479

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 15/114 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           F+  P++    ++  A+ L  + +R         + DL TGTG +   + +++   K VG
Sbjct: 301 FKVGPKSFYQTNTQQAYHLYEVARRFANLSGTEIVYDLYTGTGTIANFVARQAK--KVVG 358

Query: 127 VDISCKALEIAKSNAVTNGV-------SERFDTLQSDWFSSVEGLFDVIVSNPP 173
           V+   +A+  AK N+  NG+        +  D L  D+ ++  G  DVI+++PP
Sbjct: 359 VEYVPEAIADAKVNSELNGIGNTTFYAGDMKDILNDDFIAN-NGQPDVIITDPP 411


>gi|283836193|ref|ZP_06355934.1| ribosomal protein L11 methyltransferase [Citrobacter youngae ATCC
           29220]
 gi|291067545|gb|EFE05654.1| ribosomal protein L11 methyltransferase [Citrobacter youngae ATCC
           29220]
          Length = 293

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +GVDI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAQRNGVSERLELYLPKDQPE 220

Query: 160 SVEGLFDVIVSN 171
           +++   DV+V+N
Sbjct: 221 AMKA--DVVVAN 230


>gi|239991928|ref|ZP_04712592.1| hypothetical protein SrosN1_31802 [Streptomyces roseosporus NRRL
           11379]
          Length = 295

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP   K  V R+LD+G+G G V   L +     + V VD +   LE A++ A   GV +
Sbjct: 46  ALPTAPK--VRRVLDIGSGPGVVSCLLAEVFREAEVVAVDATPALLERARNRARRLGVID 103

Query: 149 RFDTLQSD 156
           RF TL+++
Sbjct: 104 RFRTLEAE 111


>gi|225710904|gb|ACO11298.1| methyltransferase METT10D [Caligus rogercresseyi]
          Length = 436

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           ++R  +R LD+G G   +   L      +  +G +   ++L+ A++N   N +S++   L
Sbjct: 94  QRRTDIRGLDIGVGCSCIYPLLAARHFNWSMLGFENHPESLKHAQANITQNQLSDKISVL 153

Query: 154 QSDWFSSVEG--LFDVIVSNPPYIES 177
            S  F    G  + D  + NPP+ +S
Sbjct: 154 SSSSFFRALGDTVLDFTMCNPPFFDS 179


>gi|68075837|ref|XP_679838.1| methyl transferase-like protein [Plasmodium berghei strain ANKA]
 gi|56500670|emb|CAI04376.1| methyl transferase-like protein, putative [Plasmodium berghei]
          Length = 227

 Score = 35.8 bits (81), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 22/162 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPFF 122
           SSDTF      E L D   A S       +V  +L++GTG+G + L L      K     
Sbjct: 28  SSDTF---VFAEALEDDVEAIS------PNVNMVLEMGTGSGYLILFLYELLLKKNKKID 78

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
               +DI+  A    ++    NG+S   + + S+ F+++   G FD+I+ NPPY+E+   
Sbjct: 79  LLYCIDINRDACNCVQNAISLNGIS-NVEIINSNLFNNLRTCGQFDIILFNPPYVETE-- 135

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                E+   D   S  GG  G          V  HL+ +G+
Sbjct: 136 ---QDELNKTDIVASYAGGKQGREVILKFLHTVYDHLSNNGI 174


>gi|291520465|emb|CBK75686.1| 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
           [Butyrivibrio fibrisolvens 16/4]
          Length = 261

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           RD   +LD+GTGTG +   + +     K +G DI+   +  AK  A   G+   F T  +
Sbjct: 43  RDGQHVLDIGTGTGVLPRNMYRYGA--KWIGTDITENQILQAKRLAAEAGMDIDFFTCPA 100

Query: 156 DWFSSVEGLFDVIVS 170
           +     +G FDVI +
Sbjct: 101 ENVDYPDGTFDVITA 115


>gi|302142307|emb|CBI19510.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D  TG G   +   + S     + +DI  K +E A+ NA   GV +R D ++ D F  
Sbjct: 518 IVDCFTGVGGNAIQFAQRSKHV--IAIDIDPKKIEYAQHNAAIYGVDDRIDFIKGDSFLL 575

Query: 161 VEGL-FDVIVSNPPY 174
              L  D +  +PP+
Sbjct: 576 ASTLKADTVFLSPPW 590


>gi|226366125|ref|YP_002783908.1| methyltransferase [Rhodococcus opacus B4]
 gi|226244615|dbj|BAH54963.1| putative methyltransferase [Rhodococcus opacus B4]
          Length = 223

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 17/108 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  GTGA+ +        +    VD+S +A      NA  N  + R   ++ D   
Sbjct: 32  RVLDLCCGTGALSVEACAAGAGWV-TAVDVSRRAAISTWLNATLNRRTIRV--VRGDLVD 88

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP-RI---SLDGGIDG 202
           +V  L FDV+V+NPPY  +           D  P R+   + DGG+DG
Sbjct: 89  AVRTLRFDVVVANPPYAPA---------TDDGRPGRVLARAWDGGVDG 127


>gi|303240394|ref|ZP_07326912.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2]
 gi|302592121|gb|EFL61851.1| Methyltransferase type 11 [Acetivibrio cellulolyticus CD2]
          Length = 216

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 16/81 (19%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ILDLG G G   + A ++  P  K +G+DI+ + +++A SNA   G+S       + WF
Sbjct: 35  NILDLGCGRGNETIQAAIQTGPHGKAIGLDITQEMIDVALSNAEGIGIS-------NIWF 87

Query: 159 --SSVEGL------FDVIVSN 171
               +E L      FD ++SN
Sbjct: 88  VKGDIENLPFDERIFDAVISN 108


>gi|239945464|ref|ZP_04697401.1| hypothetical protein SrosN15_31040 [Streptomyces roseosporus NRRL
           15998]
 gi|291448921|ref|ZP_06588311.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291351868|gb|EFE78772.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 295

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +LP   K  V R+LD+G+G G V   L +     + V VD +   LE A++ A   GV +
Sbjct: 46  ALPTAPK--VRRVLDIGSGPGVVSCLLAEVFREAEVVAVDATPALLERARNRARRLGVID 103

Query: 149 RFDTLQSD 156
           RF TL+++
Sbjct: 104 RFRTLEAE 111


>gi|218708541|ref|YP_002416162.1| hypothetical protein VS_0507 [Vibrio splendidus LGP32]
 gi|262828815|sp|B7VJ58|TRMN6_VIBSL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218321560|emb|CAV17512.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 242

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 11/83 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSNAVTNGVSERF----DTLQ 154
           +LD+GTGTG   LAL+    F   +   +DI   A++ A  N   +   +R     D++ 
Sbjct: 46  VLDIGTGTG--LLALMAAQRFEDALISAIDIDQHAIDAATVNIEQSPWQDRISLHHDSVL 103

Query: 155 SDWFSSVEGLFDVIVSNPPYIES 177
           +  FS     FD I+ NPPY  S
Sbjct: 104 TTDFSQ---RFDAIICNPPYFNS 123


>gi|206890280|ref|YP_002248899.1| hypothetical protein THEYE_A1073 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742218|gb|ACI21275.1| hypothetical protein THEYE_A1073 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 256

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 33/53 (62%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           L +IEK+    I+++G+G G + + L +   F K + VDIS + L+  K+N++
Sbjct: 30  LKKIEKKHYSTIIEIGSGRGFLTIPLSETLSFEKFIHVDISFEFLKRLKTNSI 82


>gi|229582068|ref|YP_002840467.1| methylase [Sulfolobus islandicus Y.N.15.51]
 gi|228012784|gb|ACP48545.1| methylase [Sulfolobus islandicus Y.N.15.51]
          Length = 207

 Score = 35.8 bits (81), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 29/156 (18%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RI+ +R F   +L L+  T+EP  +T++L++      L ++ K +  ++LD+G+G+G + 
Sbjct: 5   RIVEFRGF---KLCLNDQTYEPSDDTDILLN------LLKVGKGE--KVLDMGSGSGILG 53

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---FDTLQSDWFSSVEGL-FDVI 168
           +  L      K + VDI+  A      +   N + +       L  D  S +    FDV 
Sbjct: 54  IWSLIMGG--KVMFVDINPYATTSTLCSLKVNNLYKSPNYLGVLNCDLLSCLRKYDFDVA 111

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
           + NPPY          L V +++  I  S  GG DG
Sbjct: 112 IFNPPY----------LPVEEYNEWIGYSWSGGKDG 137


>gi|256545047|ref|ZP_05472414.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
           51170]
 gi|256399250|gb|EEU12860.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
           51170]
          Length = 233

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  +++K  +  ++D+G+G+G + LA        K   ++I  +   + K N 
Sbjct: 25  IDSILLANFSKMKKNKI--LIDIGSGSGILSLACSSYYNLSKVFSIEIQKEKANLLKENI 82

Query: 142 VTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             NG++      D L    F +     D I++NPPY
Sbjct: 83  KLNGINNIEVVNDDLNKVNFPN--NFCDYIITNPPY 116


>gi|242399935|ref|YP_002995360.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus
           MM 739]
 gi|242266329|gb|ACS91011.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus
           MM 739]
          Length = 365

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 10/99 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           + +++A ++  + + D   +LD   G+G + + L       K +G++   K L+ A  NA
Sbjct: 202 LKASIANAMIELAELDEGSVLDPMCGSGTILIELALRGYEGKIIGIEKYKKHLKGAMMNA 261

Query: 142 VTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPPY 174
           +  GV ++ D +Q D      +  SV    D ++SN PY
Sbjct: 262 LAAGVLDKIDLIQGDATRLSHYLDSV----DFVISNLPY 296


>gi|168186539|ref|ZP_02621174.1| cyclopropane fatty acid synthase family protein [Clostridium
           botulinum C str. Eklund]
 gi|169295425|gb|EDS77558.1| cyclopropane fatty acid synthase family protein [Clostridium
           botulinum C str. Eklund]
          Length = 391

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 38  LTNAIVRSLKHE-SIHRILGWRDFYNVRL--TLSSDTFEPRPETELLVDSAL---AFSLP 91
           +TN  ++  K +   H  LG  DFY++ L  T+S      + + + L D+ L    + L 
Sbjct: 100 ITNHSIKQNKKDIQFHYDLG-NDFYSIWLDDTMSYSCAYFKTKEDTLYDAQLNKVKYILK 158

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           ++  ++  R+LD+G G G + +   KE    K  G+ +S + +E        NG+ +
Sbjct: 159 KLNLKNGDRLLDIGCGWGELIIEAAKEYG-VKATGITLSSEQVEKVNDRIKKNGIED 214


>gi|158520602|ref|YP_001528472.1| methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
 gi|158509428|gb|ABW66395.1| Methyltransferase type 11 [Desulfococcus oleovorans Hxd3]
          Length = 253

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 3/95 (3%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D Y + + L        P  +   + A+  ++P  ++   ++I D+G GTGA  L LL  
Sbjct: 2   DDYQLLIDLHKSADRQGPGGDAETEQAIFLAMP--DRSKPLKIADIGCGTGASAL-LLAR 58

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            P  +   VD     LE+ +  A + G+SE+  TL
Sbjct: 59  LPKAQITAVDFLEDFLEVLEDRAASMGLSEKITTL 93


>gi|332978604|gb|EGK15308.1| methyltransferase domain protein [Psychrobacter sp. 1501(2011)]
          Length = 403

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 13/119 (10%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG + + L K     + +  D++ +AL+ A+ N    G+S      Q+D F +  
Sbjct: 231 DIGTGTGLLAIVLAKRG-VKQIIATDLNPRALDCAQDNFDRLGLSN-VQLQQADLFPNDV 288

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              ++IV NPP++ +     L   V D +  +            R    G  +HL + G
Sbjct: 289 PKANLIVCNPPWLPAKPSSPLEYAVYDANSAM-----------LRGFLMGAKQHLTESG 336


>gi|325290286|ref|YP_004266467.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965687|gb|ADY56466.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 238

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVR---------ILDLGTGTGAVCLALLKE- 118
            DTF        L++S ++  + R  +R  V+         ILDL  GTG + + + K  
Sbjct: 13  QDTFNSIASRYDLMNSLMSMGMDRSWRRKTVQTVKAGPGLNILDLCCGTGKMVMEIGKRV 72

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            P  +  G+D S + LE A+ N +     +R D +Q D
Sbjct: 73  GPSGRVTGLDFSEQMLEKARENLLEYPYRDRVDLIQGD 110


>gi|312884762|ref|ZP_07744463.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367675|gb|EFP95226.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 295

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 17/112 (15%)

Query: 74  PRPET-ELLVDSALAFS----------LPRIEKRDVV--RILDLGTGTGAVCLALLKESP 120
           P P+   +++D  LAF           L  +E  D+    ++D G G+G + +A +K   
Sbjct: 123 PEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGCGSGILAIAAIKLG- 181

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLFDVIVSN 171
             + +G+DI  +AL  ++ NA  NGV+++ +  L  D   ++  L DV+V+N
Sbjct: 182 AKQVIGIDIDPQALLASQDNAQRNGVADKLEVYLPKDQPENL--LADVVVAN 231


>gi|283779327|ref|YP_003370082.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068]
 gi|283437780|gb|ADB16222.1| O-methyltransferase family 2 [Pirellula staleyi DSM 6068]
          Length = 349

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+G G GA+  A+L++    +G+  D +   +E A S   ++G+S+R  T   ++F+S
Sbjct: 186 IIDVGGGHGAILTAILQKHKNVRGIVFD-APSVVEGAASAIQSSGLSDRLSTAAGNFFAS 244

Query: 161 V 161
           V
Sbjct: 245 V 245


>gi|212696291|ref|ZP_03304419.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676920|gb|EEB36527.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 233

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  +++K     ++D+G G G + LA L      K  G++I  K  EI   N 
Sbjct: 25  IDSILLANFSKMKKNKT--LIDIGAGNGILSLACLSYYNLSKVYGIEIQEKKAEIFNENL 82

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPY 174
             N ++      +    ++    F D I++NPPY
Sbjct: 83  KLNSINNIEIINKDLNLTNFPNNFCDYIITNPPY 116


>gi|125718853|ref|YP_001035986.1| hypothetical protein SSA_2065 [Streptococcus sanguinis SK36]
 gi|125498770|gb|ABN45436.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
 gi|327462770|gb|EGF09092.1| methyltransferase domain protein [Streptococcus sanguinis SK1057]
 gi|328944875|gb|EGG39035.1| methyltransferase domain protein [Streptococcus sanguinis SK1087]
 gi|332359304|gb|EGJ37125.1| methyltransferase domain protein [Streptococcus sanguinis SK49]
 gi|332359966|gb|EGJ37780.1| methyltransferase domain protein [Streptococcus sanguinis SK1056]
 gi|332365808|gb|EGJ43565.1| methyltransferase domain protein [Streptococcus sanguinis SK355]
          Length = 230

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  LD+G G G  C+ L   S +F+ V G+D+S   L+IAK + V     +  + LQ D+
Sbjct: 40  VSALDIGCGGGNTCIFL---SSYFQHVTGIDLSVDFLQIAK-DKVEKEDLQNVELLQDDF 95

Query: 158 FSSV-EGLFDVIVS 170
            ++V E  FD I S
Sbjct: 96  LTAVFEKQFDFIFS 109


>gi|150021621|ref|YP_001306975.1| methyltransferase small [Thermosipho melanesiensis BI429]
 gi|149794142|gb|ABR31590.1| methyltransferase small [Thermosipho melanesiensis BI429]
          Length = 198

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 3/76 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + + L KE+P  K    DI+ +A+E AK NA  N ++   D  +   F  
Sbjct: 61  ILDIGCGYGIIGITLKKENPDIKLYMSDINERAVEFAKINAKDNNIAA--DIRKGYLFEV 118

Query: 161 VEG-LFDVIVSNPPYI 175
            E   FD IVSNPP +
Sbjct: 119 WENEKFDHIVSNPPIV 134


>gi|77361168|ref|YP_340743.1| ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588435|sp|Q3IHQ6|RLMG_PSEHT RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|76876079|emb|CAI87301.1| Putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           methyltransferase) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 382

 Score = 35.8 bits (81), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVS 147
           LP   K     I+DLG G G V L  L   P      VD S  A+E A+ N   N     
Sbjct: 227 LPETNKAK--SIIDLGCGNGVVGLMALSRCPNANITFVDESYMAVESARLNVELNMEAKY 284

Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           E+   +++D  S  E    D+++ NPP+ ++  V
Sbjct: 285 EQCSFVENDCLSGFERDSVDMVLCNPPFHQAQAV 318


>gi|322515646|ref|ZP_08068624.1| ribosomal protein L11 methyltransferase [Actinobacillus ureae ATCC
           25976]
 gi|322118297|gb|EFX90580.1| ribosomal protein L11 methyltransferase [Actinobacillus ureae ATCC
           25976]
          Length = 293

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AKQAIGIDIDPQAILASTNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|312889232|ref|ZP_07748787.1| Methyltransferase type 11 [Mucilaginibacter paludis DSM 18603]
 gi|311298284|gb|EFQ75398.1| Methyltransferase type 11 [Mucilaginibacter paludis DSM 18603]
          Length = 267

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136
           T  L D   A  + RI+  +   +L+L +GTG+V   LL+  P    +   D+    LE 
Sbjct: 20  TPFLFDGFSADLMERIDFSNAYNVLELASGTGSVTKQLLRHLPSGAHLTATDLQADMLET 79

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           AK       +S  +D +       ++G +D+IV
Sbjct: 80  AKQQVTATNIS--WDVVDMTNIPYIDGQYDLIV 110


>gi|299136171|ref|ZP_07029355.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX8]
 gi|298602295|gb|EFI58449.1| Methyltransferase type 11 [Acidobacterium sp. MP5ACTX8]
          Length = 242

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 9/93 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RIL+LG G G       KE P     G+D+S + ++ A+         ER   L+  
Sbjct: 55  DGTRILELGCGPGLYACRFAKEYPQITATGIDLSKRLIQRAR---------ERASNLRLH 105

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             + +EG    +   P  +++VIV  L L V D
Sbjct: 106 NCTFIEGDAQALKELPHSVDAVIVSRLFLIVPD 138


>gi|299144415|ref|ZP_07037495.1| putative SAM-dependent methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518900|gb|EFI42639.1| putative SAM-dependent methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 231

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D G+GTG +CL L+ ++  F  +  +I+  A+++   + + N + ++      D  S V+
Sbjct: 41  DFGSGTGILCLRLIDKATKF--INFEINENAVKLLNKSIIENHLDDKIINYNID-ISDVK 97

Query: 163 GL-----FDVIVSNPPYIES 177
                   D IV NPPY  S
Sbjct: 98  NFVLHQSVDTIVINPPYYNS 117


>gi|302887430|ref|XP_003042603.1| hypothetical protein NECHADRAFT_104604 [Nectria haematococca mpVI
           77-13-4]
 gi|256723515|gb|EEU36890.1| hypothetical protein NECHADRAFT_104604 [Nectria haematococca mpVI
           77-13-4]
          Length = 345

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           RD  R+LD+GTGTG+  +     +P  + +GVD+S     I  S    N + E  D L+ 
Sbjct: 107 RDAKRVLDIGTGTGSWAIDYADANPEAEVIGVDLS----PIQPSFVPPNLIFE-IDDLEK 161

Query: 156 DW 157
           +W
Sbjct: 162 EW 163


>gi|152990873|ref|YP_001356595.1| methyltransferase [Nitratiruptor sp. SB155-2]
 gi|166215343|sp|A6Q429|CMOA_NITSB RecName: Full=tRNA (cmo5U34)-methyltransferase
 gi|151422734|dbj|BAF70238.1| methyltransferase [Nitratiruptor sp. SB155-2]
          Length = 239

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 16/114 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEK-----RDVV--------RILDLGTGTGAVCLALLKE 118
           FE   E   + D  +A S+P  ++     RD+V        R+ DLG  TG++ + + K 
Sbjct: 15  FEFDEEVASVFDDMIARSVPFYKENMALVRDIVVKNVVQKDRVYDLGCSTGSLLIDIAKR 74

Query: 119 SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           SPF  + +G+D S   L+ A   A   GVS   D  ++D  S       + +SN
Sbjct: 75  SPFSLELIGLDSSEAMLQRAHHKAKAFGVS--IDFQKADIISYAYKPAKIFISN 126


>gi|257066909|ref|YP_003153165.1| putative RNA methylase [Anaerococcus prevotii DSM 20548]
 gi|256798789|gb|ACV29444.1| putative RNA methylase [Anaerococcus prevotii DSM 20548]
          Length = 375

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 11/69 (15%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDC 182
           +G DIS +A+ +AK+NA+  GV E    ++ D  S       + V+++NPPY        
Sbjct: 254 LGSDISGRAISLAKNNALNAGVEEDIAFVKRDIGSVAVSRDDYGVLIANPPY-------- 305

Query: 183 LGLEVRDFD 191
            GL + D D
Sbjct: 306 -GLRLSDMD 313


>gi|134095752|ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9
           3-methyltransferase/2-octaprenyl-6-hydroxy phenol
           methylase [Herminiimonas arsenicoxydans]
 gi|133739655|emb|CAL62706.1| 3-demethylubiquinone-9 3-methyltransferase
           (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase)
           (DHHB methyltransferase) [Herminiimonas arsenicoxydans]
          Length = 231

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 9/73 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGV---GVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           ++D+G G G     +L ES   KG    G+D+S KAL++A  +++ +GV  R++ + ++ 
Sbjct: 50  VIDIGCGGG-----ILSESMARKGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAED 104

Query: 158 FSSVE-GLFDVIV 169
            ++ E G FD++ 
Sbjct: 105 MAAREAGKFDIVT 117


>gi|186682041|ref|YP_001865237.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186464493|gb|ACC80294.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 131

 Score = 35.8 bits (81), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG+G G +     ++    +GVG+DI+ + ++ A  NA   GV++R   +Q D F++
Sbjct: 2   LYDLGSGDGRIVNTAAQKF-GTRGVGIDINPERIKEANENAQKAGVTDRVKFIQQDLFNT 60


>gi|294010470|ref|YP_003543930.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium
           japonicum UT26S]
 gi|292673800|dbj|BAI95318.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium
           japonicum UT26S]
          Length = 224

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           I+D+G GTG+  L L ++ P  + +G+D   +AL+IA+  A  
Sbjct: 45  IVDIGCGTGSFALLLKRDEPSARVIGLDPDAEALDIARRKAAA 87


>gi|229163055|ref|ZP_04291011.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803]
 gi|228620461|gb|EEK77331.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803]
          Length = 242

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 9/86 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS-NAVTN--GVSE 148
           R      +RIL+LG GTG V   L K  P      VD + + + +AK+ N V N   + E
Sbjct: 12  RYSANSSIRILELGCGTGYVTEQLSKVFPKAHITAVDFAHEMIAVAKTRNNVGNVKFLCE 71

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPY 174
             + L+      +E  +DVI+SN  +
Sbjct: 72  DIEQLK------LEASYDVIISNATF 91


>gi|146098018|ref|XP_001468293.1| hypothetical protein [Leishmania infantum]
 gi|134072660|emb|CAM71377.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|322502248|emb|CBZ37332.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 253

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G+G G VCL +L E+   K VGV+I    +  A+        S+R   L SD FS  E
Sbjct: 110 DIGSGVGNVCLQVLSETKCPKSVGVEIIPSRIRAAEE------ASKRAKLLYSDIFSKKE 163

Query: 163 GLF 165
            ++
Sbjct: 164 VVW 166


>gi|114773258|ref|ZP_01450493.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [alpha proteobacterium HTCC2255]
 gi|114546377|gb|EAU49286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [alpha proteobacterium HTCC2255]
          Length = 292

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++LD G G+G + +A LK       +G+DI  +AL+  ++NA  NGV+++ 
Sbjct: 160 AKVLDFGCGSGILGIAALKLGAA-DMLGIDIDPQALQATEANAQRNGVADKL 210


>gi|328542979|ref|YP_004303088.1| ribosomal protein L11 methyltransferase [polymorphum gilvum
           SL003B-26A1]
 gi|326412725|gb|ADZ69788.1| Ribosomal protein L11 methyltransferase [Polymorphum gilvum
           SL003B-26A1]
          Length = 296

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           + +R    ILDLGTGTG  A+  A L     F     DI   A   A+ NA  NGVS   
Sbjct: 147 LARRRYANILDLGTGTGVLAIAAAKLARQRVF---ATDIDPVATRTARENARLNGVSTLV 203

Query: 151 DT-----LQSDWFSSVEGLFDVIVSN 171
            T     +    F+ + G FD++++N
Sbjct: 204 RTFTVPGVDHRLFAEL-GPFDLVIAN 228


>gi|289193240|ref|YP_003459181.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
 gi|288939690|gb|ADC70445.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
          Length = 277

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +L++GTG G + + L KE    K + ++ S   + + K N   NG+ E  + + +DW S 
Sbjct: 73  VLEIGTGAGTLTIPLAKEVK--KVIAIEKSEMNIRLLKENLRENGI-ENVEIINADWNSI 129

Query: 160 SVEGLFDVIV 169
            ++  FD++V
Sbjct: 130 DIDDKFDLVV 139


>gi|256070796|ref|XP_002571728.1| rna m5u methyltransferase [Schistosoma mansoni]
 gi|238656875|emb|CAZ27958.1| rna m5u methyltransferase, putative [Schistosoma mansoni]
          Length = 607

 Score = 35.8 bits (81), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 13/91 (14%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           EK+ +  +LD+  GTG + L L K   F + +G+D+   A+E AKSNA  N      D  
Sbjct: 444 EKKRI--LLDVCCGTGTIALCLSKH--FDRVIGIDMCNSAIEDAKSNAKLN------DIQ 493

Query: 154 QSDWFS--SVEGLFDVIVSNPPYIE-SVIVD 181
             ++F+  +   L + I S P Y + SVIVD
Sbjct: 494 NVEFFAGKAENMLRNTIDSLPEYCDLSVIVD 524


>gi|163867842|ref|YP_001609046.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum
           CIP 105476]
 gi|189037614|sp|A9IQF4|UBIG_BART1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|161017493|emb|CAK01051.1| 3-demethylubiquinone-9 3-methyltransferase [Bartonella tribocorum
           CIP 105476]
          Length = 247

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D ++ILD+G G G +C  + +       VGVD +   +++AK +A  N +S  + T  ++
Sbjct: 64  DNLKILDIGCGGGLLCEPMARLGATV--VGVDAAQTNIDVAKIHAAQNNLSIDYRTTTAE 121

Query: 157 WFSSVEGLFDVIVS 170
             ++    FD+I++
Sbjct: 122 ALANEGEKFDIILN 135


>gi|157963957|ref|YP_001503991.1| putative SAM-dependent methyltransferase [Shewanella pealeana ATCC
           700345]
 gi|205829609|sp|A8HA69|RLMF_SHEPA RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|157848957|gb|ABV89456.1| protein of unknown function DUF890 [Shewanella pealeana ATCC
           700345]
          Length = 380

 Score = 35.8 bits (81), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 12/97 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSE 148
           RI K   VR+LD+GTG   +   L  +S  +  VG D+    L IA +  +  G   ++ 
Sbjct: 144 RIPKGPKVRVLDIGTGANVIYPLLGIQSYGWDFVGSDVD--PLSIANAQQIFAGNSDIAN 201

Query: 149 RFDT-LQSDWFSSVEGL------FDVIVSNPPYIESV 178
           +F + LQ+D      G+      FD+ + NPP+  S+
Sbjct: 202 KFSSRLQADSKHVFHGVIEANERFDLTLCNPPFHASL 238


>gi|323702677|ref|ZP_08114338.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323532340|gb|EGB22218.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 391

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 7/80 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD    TG   +   K     + +G+DI+  ALE+A+ NA  NG S+     +++ F 
Sbjct: 219 RVLDCFCHTGTFSMYAAKFGAR-EVLGLDIAAPALEVARVNARLNGYSDICTFKETNSFD 277

Query: 160 SVEGL------FDVIVSNPP 173
            +  +      FDV++ +PP
Sbjct: 278 ELRAMEKAGEKFDVVILDPP 297


>gi|322412423|gb|EFY03331.1| methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 384

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           G DI  + +EIAKSNA   G+S+   F  ++   F + + +  VI+SNPPY E ++ D
Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKVNGVIISNPPYGERLLDD 317


>gi|261367521|ref|ZP_05980404.1| RNA methyltransferase, RsmD family [Subdoligranulum variabile DSM
           15176]
 gi|282570303|gb|EFB75838.1| RNA methyltransferase, RsmD family [Subdoligranulum variabile DSM
           15176]
          Length = 182

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-- 156
            R+LDL  G+G + +  L        V VD S +AL I  +N    GV  + D    +  
Sbjct: 44  ARVLDLFAGSGQLGIEALSRGAK-SCVFVDRSPEALGIVTANCKAAGVERQSDIRHGEAL 102

Query: 157 -WFSSVEGLFDVIVSNPPYIESVIVDCL 183
            + +++ G FD+++ +PP+ + +I   L
Sbjct: 103 AFLANIRGPFDLVLLDPPFHQGLIGQVL 130


>gi|160940954|ref|ZP_02088294.1| hypothetical protein CLOBOL_05846 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436198|gb|EDP13965.1| hypothetical protein CLOBOL_05846 [Clostridium bolteae ATCC
           BAA-613]
          Length = 244

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           R+LDLG G G  C+  ++       VGVDIS K LE+A+   
Sbjct: 45  RLLDLGCGYGWHCIYAMEHGAV-SAVGVDISGKMLEVAREKT 85


>gi|18977219|ref|NP_578576.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638]
 gi|18892878|gb|AAL80971.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638]
          Length = 248

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 14/154 (9%)

Query: 102 LDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           L++GTG  A+ +AL+ E  FF  K    ++  +  E A+ N   N  + R          
Sbjct: 85  LEIGTGHTAM-MALMAEK-FFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIK 142

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V EG FDVI S PPY +      LG   R    R ++ GG  G      + +    HLN
Sbjct: 143 GVVEGTFDVIFSAPPYYDK----PLG---RVLTEREAIGGGKYGEEFSVKLLEEAFDHLN 195

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             G  ++ +   +K  ++ + + R + L  + KD
Sbjct: 196 PGGKVALYLPDKEK--LLNVIKERGIKLGYSVKD 227


>gi|323450126|gb|EGB06009.1| hypothetical protein AURANDRAFT_16878 [Aureococcus anophagefferens]
          Length = 101

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           ++D   G G   +AL  E  +   V VD+  + L++A+ NA   GV++R D + +D
Sbjct: 46  VIDAFCGCGGNAIALASEGAWV--VAVDVDARKLDMARHNAAIYGVADRIDFVAAD 99


>gi|257051707|ref|YP_003129540.1| methylase [Halorhabdus utahensis DSM 12940]
 gi|256690470|gb|ACV10807.1| methylase [Halorhabdus utahensis DSM 12940]
          Length = 204

 Score = 35.8 bits (81), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 14/122 (11%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D+GTG+G V  AL +     + VG D++  A + A+   +    +   D   +D   
Sbjct: 50  RAIDVGTGSGYVASALAEAG--VEVVGTDLNPAACQQARDAGIPVARANLLDPFLAD--- 104

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                FD++  NPPY+ S      G  +     + +L GG DG +        V R L  
Sbjct: 105 ----SFDLVTFNPPYLPSTPDTEWGDWM-----QTALSGGEDGRAAVDPFLADVGRVLED 155

Query: 220 DG 221
            G
Sbjct: 156 GG 157


>gi|291320531|ref|YP_003515795.1| type I restriction modification system Hsdm modification
           (methylase) protein [Mycoplasma agalactiae]
 gi|290752866|emb|CBH40841.1| Modification (Methylase) protein of type Irestriction modification
           system HsdM [Mycoplasma agalactiae]
          Length = 892

 Score = 35.8 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P   +EL+    +A+ L   + R+V+++ D  +G+G++ + +  E   +     
Sbjct: 210 AGEFYTPHEVSELM-SKIVAYHL---KDREVIKVYDPTSGSGSLLITIGHEFKKYNNGDS 265

Query: 128 DISCKALEI-------AKSNAVTNGVS------ERFDTLQSDW-------FSSVEGL-FD 166
            +S  A E+        + N +   +S         DTL+ DW       FSS + L  D
Sbjct: 266 PVSYYAQELKTEVFNLTRMNLIMKNISPTEIHARNGDTLEQDWPMFENNDFSSYKHLSVD 325

Query: 167 VIVSNPPY 174
            +VSNPPY
Sbjct: 326 AVVSNPPY 333


>gi|329900834|ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327549362|gb|EGF33932.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 253

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 50/91 (54%), Gaps = 8/91 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +  ++ ++    K  G+D+S KAL++A  +++  G+  R++ + ++  + 
Sbjct: 71  VLDIGCGGGILAQSMARKG--AKVTGIDLSEKALKVADLHSLEAGIDMRYEMISAENMAE 128

Query: 161 VE-GLFDVI-----VSNPPYIESVIVDCLGL 185
            E   FDV+     + + P  E+++  C  L
Sbjct: 129 REPASFDVVTCMEMLEHVPDPEAIVRACATL 159


>gi|222528759|ref|YP_002572641.1| Methyltransferase type 11 [Caldicellulosiruptor bescii DSM 6725]
 gi|222455606|gb|ACM59868.1| Methyltransferase type 11 [Caldicellulosiruptor bescii DSM 6725]
          Length = 243

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +ILD+G     + L LLK   F K  G+DIS K +E+A   AV  G+ 
Sbjct: 42  KILDIGCADAKL-LFLLKRRSFKKLYGIDISAKMIELAFKRAVLKGIK 88


>gi|170077148|ref|YP_001733786.1| SAM-dependent methyltransferase [Synechococcus sp. PCC 7002]
 gi|169884817|gb|ACA98530.1| SAM-dependent methyltransferase [Synechococcus sp. PCC 7002]
          Length = 250

 Score = 35.8 bits (81), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 11/95 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ LA  L  I+K   ++I D+G GTGA  L +L E    +   VD     LE+ ++ A 
Sbjct: 24  ETKLALDLLEIDKTAPLKIADIGCGTGASTL-VLAEQLDAQITAVDFLPDFLEVLETRAK 82

Query: 143 TNGVSERFDTLQSDWFSSVEGL------FDVIVSN 171
              +SE+  TL      S+E L      FDVI S 
Sbjct: 83  QKELSEKISTL----CCSMENLPFNDAEFDVIWSE 113


>gi|184200118|ref|YP_001854325.1| hypothetical protein KRH_04720 [Kocuria rhizophila DC2201]
 gi|183580348|dbj|BAG28819.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 576

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 12/91 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145
           +R V   LDLGTG G     LL  +        DIS +AL   + N + N          
Sbjct: 187 RRPVATALDLGTGCGIQTFHLLAHAEHV--TATDISERALATTRFNLLLNAPALGLDPEH 244

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
           + +R           V G  FD++VSNPP++
Sbjct: 245 LEDRVSLELGSMLEPVAGRSFDMVVSNPPFV 275


>gi|169617526|ref|XP_001802177.1| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15]
 gi|160703427|gb|EAT80357.2| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15]
          Length = 245

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 31/156 (19%)

Query: 72  FEPRPETELLVD-----SALAFSLPRIEKRDVVR--ILDLGTGTGAVC--LALLKESPFF 122
           +EP  ++ LL+D     S  AF   R     +    +L++G G+G V   +A   ES F 
Sbjct: 16  YEPAEDSYLLLDTLSSPSETAFLRDRFNGESLAPPLVLEVGVGSGVVLAFVAANAESIFG 75

Query: 123 K----GVGVDI---SCKALEIAKSNAVT---NGVSERFDTLQSDWFSSV-EGLFDVIVSN 171
           +     +G DI   +CKA      NA+    NG S   D +  D  +++     DV + N
Sbjct: 76  RHDVLTLGTDINSFACKAAAQTARNAIKERDNGRSVFLDVVNGDLATAIRPNSVDVFIFN 135

Query: 172 PPYIESVIVDCLGLEVRDF---DPRISLDGGIDGLS 204
           PPY+ +        E+ DF   D   ++ GG D  S
Sbjct: 136 PPYVPA--------ELPDFTRHDQHNAIPGGKDATS 163


>gi|170571310|ref|XP_001891678.1| hypothetical protein [Brugia malayi]
 gi|158603678|gb|EDP39514.1| conserved hypothetical protein [Brugia malayi]
          Length = 219

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   + DLG G G + L  +K    + G+G++I  +A+ I ++N     +    D +  D
Sbjct: 47  DGCTVADLGCGPGILLLGAVKLGASY-GLGIEIDEEAINICRNNIERCDLGNVVDVICLD 105

Query: 157 W---FSSVEGLFDVIVSNPPY 174
                S+++ +FD ++ NPP+
Sbjct: 106 VTKNISALKPIFDTVIMNPPF 126


>gi|124486498|ref|YP_001031114.1| hypothetical protein Mlab_1686 [Methanocorpusculum labreanum Z]
 gi|124364039|gb|ABN07847.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z]
          Length = 287

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A A  LP +  ++   ILD+G G G + + + +  P     G+D+   ++E +K NA   
Sbjct: 131 AFAEVLPLLSGKN---ILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQSKLNAEVE 187

Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIV 169
           GV+  RF    +      EG FD +V
Sbjct: 188 GVANTRFVVANTYELPFEEGYFDSVV 213


>gi|262273281|ref|ZP_06051096.1| ribosomal protein L11 methyltransferase [Grimontia hollisae CIP
           101886]
 gi|262222654|gb|EEY73964.1| ribosomal protein L11 methyltransferase [Grimontia hollisae CIP
           101886]
          Length = 294

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 26/137 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G +           K +G+DI  +AL+ +K+NA  NGV++R +  L  D   
Sbjct: 163 VIDFGCGSG-ILSLAALLLGAEKVIGIDIDPQALQASKANAERNGVADRLELYLPKDQPE 221

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI----------SLDGGIDGLSHYRTI 209
           +++             E V+ + L   +R+  P I          ++ G +D  S   ++
Sbjct: 222 NLQA------------EVVVANILAGPLRELSPVIKSLIAPQGVLAMSGVLD--SQAESV 267

Query: 210 ADGVSRHLNKDGLCSVE 226
           AD     LN D +   E
Sbjct: 268 ADCYRDELNVDAIVEQE 284


>gi|258654059|ref|YP_003203215.1| S-adenosyl-methyltransferase MraW [Nakamurella multipartita DSM
           44233]
 gi|258557284|gb|ACV80226.1| S-adenosyl-methyltransferase MraW [Nakamurella multipartita DSM
           44233]
          Length = 348

 Score = 35.8 bits (81), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           DVV ++D   G G   LALL+  P  + VG+D   +AL IA+      G+++R + + +
Sbjct: 53  DVV-LVDATLGMGGHTLALLQAHPRLRVVGIDRDPQALSIAEQRITAAGLADRVELVHA 110


>gi|332358767|gb|EGJ36590.1| glycerophosphoryl diester phosphodiesterase [Streptococcus
           sanguinis SK355]
          Length = 326

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199
           G+++ FD  ++DW S+   + D      PY+E+ I        LG +  +FD ++S D  
Sbjct: 44  GLAQTFDESKADWDSNTAAMIDPPTH--PYLENTISSMQAAFDLGADAVEFDVKLSKDKQ 101

Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +    D    ++T  +G  +      L  ++IGY    D  + +  R
Sbjct: 102 LAVFHDATLEFKTGIEGEIQDYTMAELKKMDIGYGYTADGGKTYPFR 148


>gi|325293441|ref|YP_004279305.1| ribosomal protein L11 methyltransferase [Agrobacterium sp. H13-3]
 gi|325061294|gb|ADY64985.1| putative ribosomal protein L11 methyltransferase [Agrobacterium sp.
           H13-3]
          Length = 292

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 7/84 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----- 147
           +  R V   LDLGTG+G + +A+ K       +  DI   A+ +A+ N   NG+      
Sbjct: 147 LRTRTVRNALDLGTGSGVLAIAVRKMR-HIPVLATDIDPIAVRVARENVRLNGIVSGLAL 205

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSN 171
           E      SD F    G FD+I++N
Sbjct: 206 ETAPGFHSDAFRKY-GPFDLIIAN 228


>gi|258620656|ref|ZP_05715693.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573]
 gi|258587171|gb|EEW11883.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573]
          Length = 295

 Score = 35.8 bits (81), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV ++ +  L  D   
Sbjct: 163 VIDFGCGSGILAIAAIKLG-AAKVIGIDIDPQALLASKDNAARNGVEDQIEVYLPKD--Q 219

Query: 160 SVEGLFDVIVSN 171
             + + DV+V+N
Sbjct: 220 PEDLVADVVVAN 231


>gi|227540594|ref|ZP_03970643.1| possible SAM-dependent methyltransferase [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227239533|gb|EEI89548.1| possible SAM-dependent methyltransferase [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 197

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            P  E ++V   LDLG G G  C+  +++      +GVD+S K +  AK N+    +  R
Sbjct: 38  FPDFEHKNV---LDLGCGYGWHCIYAMQQGASHV-IGVDLSAKMIRKAKENSAGLDIDYR 93

Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171
              ++   F++ E  FD+++S+
Sbjct: 94  QMAIEDVNFATEE--FDIVISS 113


>gi|295097604|emb|CBK86694.1| 16S rRNA m(2)G 1207 methyltransferase /23S rRNA m(2)G-1835
           methyltransferase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 378

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157
            I+DLG G G + L LL ++P    V  D S  A+  ++ N  TN     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVETNLPEALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ +  NPP+
Sbjct: 291 LSGVEPFRFNAVFCNPPF 308


>gi|317054356|ref|YP_004118381.1| methyltransferase type 12 [Pantoea sp. At-9b]
 gi|316952351|gb|ADU71825.1| Methyltransferase type 12 [Pantoea sp. At-9b]
          Length = 330

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 56  GWRDFYNVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           GW+D   +    +        + +  L  D+A A +    + +   R+LD+G G G + +
Sbjct: 119 GWQDPLEIETAWADAAMSQIAQEQRALSGDTACAIASELADFQRPARLLDMGGGPGLITV 178

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           AL +  P   GV +D+  K   +A+ N    G+  RF
Sbjct: 179 ALAERFPQLSGVVLDLP-KTASVAQQNIERAGLRGRF 214


>gi|302525418|ref|ZP_07277760.1| methyltransferase-UbiE family protein [Streptomyces sp. AA4]
 gi|302434313|gb|EFL06129.1| methyltransferase-UbiE family protein [Streptomyces sp. AA4]
          Length = 271

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 82  VDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD++ A+  P +   R V   LD+G G G + + L +     + VG+D+S   LE A+++
Sbjct: 24  VDNSAAYLAPELLPGRSV---LDVGCGPGTITVDLARRVAPGEVVGIDVSETVLEQARAH 80

Query: 141 AVTNGVS----ERFDTLQSDWFSSVEGLFDVI 168
           A + GVS    ER D       +   G FDV+
Sbjct: 81  ARSEGVSNVRFERADITA----APAVGRFDVV 108


>gi|229013328|ref|ZP_04170468.1| Biotin biosynthesis protein BioC [Bacillus mycoides DSM 2048]
 gi|228747921|gb|EEL97786.1| Biotin biosynthesis protein BioC [Bacillus mycoides DSM 2048]
          Length = 242

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +  S L+    R  +   +RIL+LG GTG V   L    P      VD + + + +AK+ 
Sbjct: 1   MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                V  R + ++      +E  +DVI+SN  +
Sbjct: 61  KSLENVMFRCEDIEQ---LKLENPYDVIISNATF 91


>gi|284031997|ref|YP_003381928.1| type 11 methyltransferase [Kribbella flavida DSM 17836]
 gi|283811290|gb|ADB33129.1| Methyltransferase type 11 [Kribbella flavida DSM 17836]
          Length = 251

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W++ +  R  L    + P  E  L    +L   + R       R+LDLG G G++     
Sbjct: 7   WQE-WQRRWDLQQGNYLPERERTL----SLMLDIIRRTTGPNPRLLDLGCGPGSLLTRAF 61

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +  P    VGVD+    LEIA++ A   G+  + D  Q  W
Sbjct: 62  QHLPGGDLVGVDLDPLLLEIARNVAGDRGMFLQADFCQEGW 102


>gi|289209404|ref|YP_003461470.1| ribosomal protein L11 methyltransferase [Thioalkalivibrio sp.
           K90mix]
 gi|288945035|gb|ADC72734.1| ribosomal protein L11 methyltransferase [Thioalkalivibrio sp.
           K90mix]
          Length = 293

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
            P T + + S LA + PR ++     +LD G G+G + +A LK       VG DI  +A+
Sbjct: 141 HPTTAMCLKS-LAANPPRDQE-----VLDYGCGSGILAIAALKLG-ARHAVGTDIDRQAV 193

Query: 135 EIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSN 171
           +   SNA  N +SE + +   +D      G FD++++N
Sbjct: 194 QATYSNAAANDISEDQIEAGLTDHPVPDAG-FDLVIAN 230


>gi|84489290|ref|YP_447522.1| putative type I restriction-modification system, methyltransferase
           subunit [Methanosphaera stadtmanae DSM 3091]
 gi|84372609|gb|ABC56879.1| putative type I restriction-modification system, methyltransferase
           subunit [Methanosphaera stadtmanae DSM 3091]
          Length = 508

 Score = 35.4 bits (80), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQ 154
           + D   G+G++ L + KE+   +  G +++     +A+ N + +GV       ++ D+L+
Sbjct: 217 VYDPTCGSGSLLLRVSKEADVSEFYGQELNQTTYNLARMNMILHGVKYNHFNIKQGDSLE 276

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
           +D    ++  FD +V+NPP+
Sbjct: 277 NDRHEELK--FDAVVANPPF 294


>gi|260435757|ref|ZP_05789727.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109]
 gi|260413631|gb|EEX06927.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109]
          Length = 465

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 7/92 (7%)

Query: 60  FYNVRLTLSSDTFEP--RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           F  ++L LSS TF     P+ E +V     + L +       R++D   G G + L L K
Sbjct: 280 FCGIKLALSSTTFVQVNTPQAERIVQRLTDWLLVQCAG---ARVVDAYCGVGTIALPLSK 336

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
               F   G++++  ++E A+ NA+ NG+S R
Sbjct: 337 AG--FNVQGLELNPDSVEQARLNAMHNGLSSR 366


>gi|229168862|ref|ZP_04296580.1| Biotin biosynthesis protein BioC [Bacillus cereus AH621]
 gi|228614592|gb|EEK71699.1| Biotin biosynthesis protein BioC [Bacillus cereus AH621]
          Length = 242

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +  S L+    R  +   +RIL+LG GTG V   L    P      VD + + + +AK+ 
Sbjct: 1   MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                V  R + ++      +E  +DVI+SN  +
Sbjct: 61  KSLENVMFRCEDIEQ---LKLENPYDVIISNATF 91


>gi|323454084|gb|EGB09954.1| hypothetical protein AURANDRAFT_62435 [Aureococcus anophagefferens]
          Length = 539

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 5/58 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAV 142
           LA SLP   KR  V  +D+G GTG +C A L+++ P  + VGVD+S + L+ A+   V
Sbjct: 357 LARSLP---KRPGVVAVDVGAGTG-LCGAALRDALPIEEIVGVDVSPRMLDAAREKGV 410


>gi|254580057|ref|XP_002496014.1| ZYRO0C08470p [Zygosaccharomyces rouxii]
 gi|238938905|emb|CAR27081.1| ZYRO0C08470p [Zygosaccharomyces rouxii]
          Length = 227

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 15/109 (13%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPE-----------TELLVDSALAFSLPRIEKRDVVRILD 103
           LG +++++    L  + FE  PE            E  + S L  ++          I D
Sbjct: 12  LGTKEYWDEFYALEKNNFENNPEDTGECWFDDNDAEAKMVSFLEDNIGMHHIEHGCSICD 71

Query: 104 LGTGTGAVCLALLKESPFFKG--VGVDISCKALEIAKSNAVTNGVSERF 150
           LGTG G +   L++    F G  +GVD S +++E AK  A T G+   F
Sbjct: 72  LGTGNGHLLFELVESG--FNGPMLGVDYSEQSIEFAKEVAQTKGLPVEF 118


>gi|229491934|ref|ZP_04385754.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
 gi|229321147|gb|EEN86948.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
          Length = 378

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG G+G +  A+ ++ P    +  D S  A+  A + A  NGV +R   L+ D  SS
Sbjct: 237 VIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATASANGVGDRVSGLRDDAVSS 296

Query: 161 VEGL-FDVIVSNPPY 174
           +     D+++ NPP+
Sbjct: 297 LPSASADLVLLNPPF 311


>gi|206577246|ref|YP_002236326.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae 342]
 gi|288933314|ref|YP_003437373.1| ribosomal protein L11 methyltransferase [Klebsiella variicola
           At-22]
 gi|290511635|ref|ZP_06551004.1| 50S ribosomal protein L11 methyltransferase [Klebsiella sp. 1_1_55]
 gi|226710090|sp|B5XND9|PRMA_KLEP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|206566304|gb|ACI08080.1| ribosomal protein L11 methyltransferase [Klebsiella pneumoniae 342]
 gi|288888043|gb|ADC56361.1| ribosomal protein L11 methyltransferase [Klebsiella variicola
           At-22]
 gi|289776628|gb|EFD84627.1| 50S ribosomal protein L11 methyltransferase [Klebsiella sp. 1_1_55]
          Length = 293

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     K +G+DI  +A++ ++ NA  NGVSER +  L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGIDIDPQAIQASRDNAQRNGVSERLELYLPQDQPE 220

Query: 160 SVEGLFDVIVSN 171
           +++   DV+V+N
Sbjct: 221 AMKA--DVVVAN 230


>gi|110750216|ref|XP_624562.2| PREDICTED: methyltransferase-like protein 10-like [Apis mellifera]
          Length = 221

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++ K D  +I+D+G G G   + L K+  F K +G+D S KA+++A+  +  N VS
Sbjct: 59  KLNKND--KIIDIGCGNGMTLIELAKQG-FEKLMGIDYSQKAVDLAREVSKENNVS 111


>gi|52424588|ref|YP_087725.1| ribosomal protein L11 methyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|60390343|sp|Q65V70|PRMA_MANSM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52306640|gb|AAU37140.1| PrmA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 293

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 1/50 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++D G G+G + +A LK     + +G+DI  +A+  +++NA  NGV++R 
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-EAIGIDIDPQAILASRNNAEQNGVADRL 210


>gi|313888736|ref|ZP_07822400.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845294|gb|EFR32691.1| conserved hypothetical protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 376

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
           +  D+S KA++IAK+NA   G+ E     Q D     +   + VI++NPPY E +
Sbjct: 256 LASDVSHKAIQIAKANAEILGLDEDISFFQKDIRDLDLPDDYGVIITNPPYGERI 310


>gi|322417812|ref|YP_004197035.1| 50S ribosomal protein L11 methyltransferase [Geobacter sp. M18]
 gi|320124199|gb|ADW11759.1| ribosomal protein L11 methyltransferase [Geobacter sp. M18]
          Length = 306

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +LD+GTG+G  ++  ALL  +       VDI  +A+ + + N   NGV++R     +D  
Sbjct: 175 VLDVGTGSGVLSIAAALLGATEI---TAVDIDPEAVRVTQENLELNGVADRVTASTTDLS 231

Query: 159 SSVEGLFDVIVSN 171
              EG F V+V+N
Sbjct: 232 RLPEG-FAVVVAN 243


>gi|268592183|ref|ZP_06126404.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri
           DSM 1131]
 gi|291312585|gb|EFE53038.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri
           DSM 1131]
          Length = 337

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G G +   L  ++P  K    D+S  AL+ A S    N ++   + + SD +S 
Sbjct: 200 LLDLACGNGVIAAVLGSQNPELKLTLSDVSASALDSAASTLEANKLAG--EIIASDAYSD 257

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADG 212
           +   FD I+SNPP+ + +      +E   +  P+    GG     H R +A+ 
Sbjct: 258 INDKFDWIISNPPFHDGLNTSYRAVENMIYQAPKYLKKGG-----HLRIVANA 305


>gi|198435713|ref|XP_002131256.1| PREDICTED: similar to hepatocellular carcinoma-associated antigen
           137 [Ciona intestinalis]
          Length = 787

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G+G  A+  A   E    K + +DI    LE AK NA   GV +R D +   +F     L
Sbjct: 595 GSGGNAIQFAFTCE----KVLAIDIDPVKLENAKHNAAIYGVEDRIDFICGSFFDIAPTL 650

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS----RHLNK 219
             D++  +PP+      +C    + +       D G    +  + I+D ++    R+ N 
Sbjct: 651 KADIVFLSPPWGGPEYTNCETYSIAEMG-----DFGTKAFTLAKNISDNIAFFLPRNSNV 705

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           D L  +  G   +V++ +   + K+  + A+  YG
Sbjct: 706 DELVCL-AGPGNQVELEQNMLNNKIVTITAY--YG 737


>gi|120402772|ref|YP_952601.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1]
 gi|119955590|gb|ABM12595.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1]
          Length = 505

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 23/198 (11%)

Query: 37  FLTNAIVRSLKHESIHRIL-------GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
            + N +V     +S+   L       G RDF  V    S+    P     +L     + S
Sbjct: 92  LIDNGVVEPAGPDSVRAALDIRPHSDGARDFLVVSDQDSALRSGPVRHDHVLGIGGASVS 151

Query: 90  LPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L   + +  V R LDLGTG G   L L  ++   + V  D + +AL +A + A  NG+S 
Sbjct: 152 LAHAVVRSPVGRALDLGTGCGIQALHL--DAHCDEVVATDTNPRALALAAATARLNGMS- 208

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +D      F  V G  FD+IVSNPP++       +G    D+   I  D G+ G +  +
Sbjct: 209 -WDLRCGSLFEPVAGERFDLIVSNPPFV-------VGTGSLDY---IYRDSGMVGDALCQ 257

Query: 208 TIADGVSRHLNKDGLCSV 225
           ++ + V+ HL   G   +
Sbjct: 258 SMIEQVADHLEPGGTAQI 275


>gi|81428998|ref|YP_395998.1| putative methyltransferase [Lactobacillus sakei subsp. sakei 23K]
 gi|78610640|emb|CAI55691.1| Putative methyltransferase [Lactobacillus sakei subsp. sakei 23K]
          Length = 243

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 5/71 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+L+L  G G   LA+L +      VG+D+S + L IA   A   GVS  F  LQ D   
Sbjct: 35  RVLELACGAGD--LAILLKQAGLDVVGLDLSTEMLTIASEKATEAGVS--FPLLQGDMLD 90

Query: 160 SVE-GLFDVIV 169
             E G FD I 
Sbjct: 91  LSEVGTFDAIT 101


>gi|84496883|ref|ZP_00995737.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649]
 gi|84383651|gb|EAP99532.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649]
          Length = 207

 Score = 35.4 bits (80), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 9/145 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LD+G G G + L L   S   + + VD++ +++++   NA T  +      +  D   
Sbjct: 69  RFLDIGCGWGPIALTLGLLSEHAEVLAVDVNERSVDLTNRNATTLDLPH-VTAVTPDAVD 127

Query: 160 SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           S    +D+I SNPP    ++ + D L L +    PR++ DG    +      +D + R +
Sbjct: 128 S-NATYDLIWSNPPIRIGKAALHDLLHLWL----PRLAPDGTAYLVVQRNLGSDSLQRWI 182

Query: 218 NKD-GLCSVEIGYNQKVDVVRIFES 241
             D G+       N+   V+++ +S
Sbjct: 183 ESDLGMPCARFATNKGFRVLKVDKS 207


>gi|332159341|ref|YP_004424620.1| hypothetical protein PNA2_1702 [Pyrococcus sp. NA2]
 gi|331034804|gb|AEC52616.1| hypothetical protein PNA2_1702 [Pyrococcus sp. NA2]
          Length = 384

 Score = 35.4 bits (80), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
           R++++ V  I D+  G G   +   K     + +GVDI    +E AK NA   GV+  F 
Sbjct: 78  RLKEQGVKSIADVSCGVGIQLIFFAKHG--IRAIGVDIDPLKIEFAKRNAEKYGVNVEFL 135

Query: 151 --DTLQSDWFSSVEGLFDVIVSNP 172
             D+L  +    ++   DVI S+P
Sbjct: 136 VGDSLSEEIVEKIDA--DVIFSDP 157


>gi|330718881|ref|ZP_08313481.1| ribosomal protein L11 methyltransferase [Leuconostoc fallax KCTC
           3537]
          Length = 297

 Score = 35.4 bits (80), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 19/117 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR----ILDLGTGTGAVCLAL 115
           F N  L+  + T    P T+L++ +             VVR    +LD+GTG+G + +A 
Sbjct: 125 FLNPELSFGTGT---HPTTKLMLQAL----------ETVVRGGETMLDIGTGSGVLSIA- 170

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSN 171
            K+    + +  D+   A+++A+ N + N +++    + SD  + V+    D+IV+N
Sbjct: 171 AKQLGVAQILATDVDDDAVQVARDNLLVNPIAQDVKVIVSDLMAGVDSAPVDLIVAN 227


>gi|326202198|ref|ZP_08192068.1| amino acid adenylation domain protein [Clostridium papyrosolvens DSM
            2782]
 gi|325987993|gb|EGD48819.1| amino acid adenylation domain protein [Clostridium papyrosolvens DSM
            2782]
          Length = 3205

 Score = 35.4 bits (80), Expect = 7.5,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 11/118 (9%)

Query: 59   DFYNVRLTLSSDTFEPRPETEL--LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            D +N+   +SS   E   E E+   +D+A+     RI+  +  R+L++G GTG +   L+
Sbjct: 2262 DSFNIAGWMSSYNGEQISELEMREWLDTAIG----RIKALNPKRVLEIGCGTGMLLFRLI 2317

Query: 117  KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG-LFDVIVSN 171
             +   +  +G DIS K LE     A    V  +   L      F  + G  FD ++ N
Sbjct: 2318 DKCESY--MGTDISTKILEYVAKVAKNKEVHHKLTLLNKSAHDFKEISGNKFDTVIIN 2373


>gi|226307758|ref|YP_002767718.1| hypothetical protein RER_42710 [Rhodococcus erythropolis PR4]
 gi|226186875|dbj|BAH34979.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 378

 Score = 35.4 bits (80), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG G+G +  A+ ++ P    +  D S  A+  A + A  NGV +R   L+ D  SS
Sbjct: 237 VIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATATANGVGDRVSGLRDDAVSS 296

Query: 161 VEGL-FDVIVSNPPY 174
           +     D+++ NPP+
Sbjct: 297 LPSASADLVLLNPPF 311


>gi|168207083|ref|ZP_02633088.1| type I restriction-modification system, M subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170661530|gb|EDT14213.1| type I restriction-modification system, M subunit [Clostridium
           perfringens E str. JGS1987]
          Length = 514

 Score = 35.4 bits (80), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           K D+  + D   G+G++ L + +E+      G +++     +A+ N + +GV    FD  
Sbjct: 221 KTDLKNVYDPTCGSGSLLLRVSREANVRTFYGQELTSTTYNLARMNMLLHGVRYSDFDIK 280

Query: 154 QSDWFSSVEGL---FDVIVSNPPY 174
             D   + + +   F+ +V+NPPY
Sbjct: 281 NDDTLENPQHIDLRFEAVVANPPY 304


>gi|315081960|gb|EFT53936.1| precorrin-6Y C5,15-methyltransferase, CbiT subunit
           [Propionibacterium acnes HL078PA1]
          Length = 198

 Score = 35.4 bits (80), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ DLGTG G++ +   +  P  + +G++   +    A++NA    +  +FD + +D   
Sbjct: 47  RLWDLGTGAGSIAVEWCRTDPTCRAIGLERKAERAANARTNASELTLPGQFDVIDADLAK 106

Query: 160 SV-EGLFD 166
            + EGL D
Sbjct: 107 GLPEGLPD 114


>gi|307264218|ref|ZP_07545809.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870464|gb|EFN02217.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 316

 Score = 35.4 bits (80), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 244 DLQA--DVVVAN 253


>gi|156355073|ref|XP_001623499.1| predicted protein [Nematostella vectensis]
 gi|156210207|gb|EDO31399.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 35.4 bits (80), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ L++G G GA+ +    + P  +    DI+  A+E    NA  +GV+     +Q+D F
Sbjct: 75  LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAENACLHGVANSVTAIQADVF 134

Query: 159 --SSVEGL-FDVIVSNPP 173
               ++G+ FD+I    P
Sbjct: 135 DCDGLKGMKFDMIFFRQP 152


>gi|282934675|ref|ZP_06339918.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
 gi|281301250|gb|EFA93551.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
          Length = 315

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LD+GTG+G + +A  K          DIS +A+  A  N   N ++     ++++  
Sbjct: 178 AKVLDVGTGSGILAIAASKLGAESVLATTDISDEAVTAANENIALNKLN-NIKVIKANLL 236

Query: 159 SSVEGLFDVIVSN 171
            ++ G FD+I++N
Sbjct: 237 KNINGKFDLILAN 249


>gi|262281141|ref|ZP_06058923.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257372|gb|EEY76108.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           calcoaceticus RUH2202]
          Length = 337

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 3/135 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDL 104
           K E I  +  W   Y+V++     T    P   ++  +D   A  LP + +    RI D 
Sbjct: 142 KTEKIKPLESWLKTYSVQINEQELTICALPGVFSQNHLDVGTAVLLPYLNQVKSGRIADF 201

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG 163
           G G G +   L K +       +DI   AL   +     NG+ S++         +    
Sbjct: 202 GCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFSRNGIGSDQLRLQPVIGIADAPT 261

Query: 164 LFDVIVSNPPYIESV 178
             D IVSNPP+ + +
Sbjct: 262 ELDAIVSNPPFHQGI 276


>gi|225016608|ref|ZP_03705800.1| hypothetical protein CLOSTMETH_00515 [Clostridium methylpentosum
           DSM 5476]
 gi|224950572|gb|EEG31781.1| hypothetical protein CLOSTMETH_00515 [Clostridium methylpentosum
           DSM 5476]
          Length = 184

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 13/117 (11%)

Query: 75  RPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           RP T+ + +   S + F LP         +LDL  G+G + +  L     F  V VD S 
Sbjct: 27  RPTTDRVKEGIFSIIQFDLPG------ANVLDLFAGSGQLGIEALSRGAKF-CVFVDSSR 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGL 185
            + E+ K N  T G+ ++   + S+  S + G   +FD+++ +PPY +++I   L +
Sbjct: 80  ASHEVEKENLKTVGLFKQSRVVLSEAESFLAGTKEVFDIVLLDPPYNQNLIPPVLEM 136


>gi|30022018|ref|NP_833649.1| methyltransferase [Bacillus cereus ATCC 14579]
 gi|218232815|ref|YP_002368730.1| putative methyltransferase [Bacillus cereus B4264]
 gi|228960191|ref|ZP_04121848.1| Methyltransferase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229047614|ref|ZP_04193204.1| Methyltransferase [Bacillus cereus AH676]
 gi|229111399|ref|ZP_04240952.1| Methyltransferase [Bacillus cereus Rock1-15]
 gi|229129207|ref|ZP_04258180.1| Methyltransferase [Bacillus cereus BDRD-Cer4]
 gi|229146501|ref|ZP_04274872.1| Methyltransferase [Bacillus cereus BDRD-ST24]
 gi|229152128|ref|ZP_04280322.1| Methyltransferase [Bacillus cereus m1550]
 gi|296504424|ref|YP_003666124.1| methyltransferase [Bacillus thuringiensis BMB171]
 gi|29897574|gb|AAP10850.1| Methyltransferase [Bacillus cereus ATCC 14579]
 gi|218160772|gb|ACK60764.1| putative methyltransferase [Bacillus cereus B4264]
 gi|228631320|gb|EEK87955.1| Methyltransferase [Bacillus cereus m1550]
 gi|228637134|gb|EEK93593.1| Methyltransferase [Bacillus cereus BDRD-ST24]
 gi|228654444|gb|EEL10309.1| Methyltransferase [Bacillus cereus BDRD-Cer4]
 gi|228672175|gb|EEL27466.1| Methyltransferase [Bacillus cereus Rock1-15]
 gi|228723861|gb|EEL75216.1| Methyltransferase [Bacillus cereus AH676]
 gi|228799459|gb|EEM46419.1| Methyltransferase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|296325476|gb|ADH08404.1| methyltransferase [Bacillus thuringiensis BMB171]
          Length = 188

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL  G+G + +  L      K + VD   KA+++   N  +  V E+ +  ++D   +V
Sbjct: 46  LDLFGGSGGLGIEALSRG-IDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAV 104

Query: 162 EGL------FDVIVSNPPYIESVIVDCLGL 185
           + L      FD+I+ +PPY E  IV  + +
Sbjct: 105 KALIKREMSFDLILIDPPYKEQKIVSLISI 134


>gi|291520682|emb|CBK75903.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Butyrivibrio fibrisolvens 16/4]
          Length = 263

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCK-----ALEIAKSNAVTNGVSE-RFDTL 153
           + LD+G G+GA+ +A  K++P  + VG+D   K     +  + ++NA   GVS   F   
Sbjct: 98  KCLDVGCGSGALTIACAKKNPNAEFVGIDRWGKEYASFSKNLCENNAKAEGVSNVSFGQG 157

Query: 154 QSDWFSSVEGLFDVIVSNPPY 174
            +   S V+  FD + SN  Y
Sbjct: 158 DATKLSFVDETFDAVTSNYVY 178


>gi|257056486|ref|YP_003134318.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM
           43017]
 gi|256586358|gb|ACU97491.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM
           43017]
          Length = 327

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 6/103 (5%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +LVD  L    P +  RD + ++D   G G    ALL   P  + +G+D   +ALE ++ 
Sbjct: 19  VLVDRVLELFEPAVSDRDAI-LVDTTLGLGGHTEALLSAYPRLRVIGLDRDPEALERSRR 77

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                G   +F     D    V    DV     P +E V++D 
Sbjct: 78  RLARYGSRVQFVHTVYDRIRDVLAELDV-----PAVEGVLMDL 115


>gi|261342547|ref|ZP_05970405.1| ribosomal RNA small subunit methyltransferase D [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315189|gb|EFC54127.1| ribosomal RNA small subunit methyltransferase D [Enterobacter
           cancerogenus ATCC 35316]
          Length = 378

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157
            I+DLG G G + L LL ++P    V  D S  A+  ++ N  TN     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPDASVVFSDESPMAVASSRLNVETNMPDALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ +  NPP+
Sbjct: 291 LSGVEPFRFNAVFCNPPF 308


>gi|78356477|ref|YP_387926.1| 50S ribosomal protein L11P methyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218882|gb|ABB38231.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 283

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 14/79 (17%)

Query: 99  VRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +R LDLGTG+G   +  A+L       GVG DI   A+E    N   N VS++F+     
Sbjct: 151 MRFLDLGTGSGILGIGCAMLG----LSGVGSDIDLLAVENTTENKEINNVSDKFEVR--- 203

Query: 157 WFSSVEGL----FDVIVSN 171
              SVE +    +D++++N
Sbjct: 204 -LGSVEAVQGEQYDLVLAN 221


>gi|85708852|ref|ZP_01039918.1| ribosomal protein L11 methylase [Erythrobacter sp. NAP1]
 gi|85690386|gb|EAQ30389.1| ribosomal protein L11 methylase [Erythrobacter sp. NAP1]
          Length = 306

 Score = 35.4 bits (80), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 90  LPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           L  ++ R +V   I D+GTGTG +  A +K  P  K    DI     E+   NA  NGV+
Sbjct: 141 LSAMKSRGIVARNIADIGTGTGLLGFAAMKLWPGAKATASDIDAICAEVVDVNAGLNGVN 200


>gi|307250814|ref|ZP_07532743.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306857173|gb|EFM89300.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 316

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 244 DLQA--DVVVAN 253


>gi|331085862|ref|ZP_08334945.1| hypothetical protein HMPREF0987_01248 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406785|gb|EGG86290.1| hypothetical protein HMPREF0987_01248 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 238

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 38/67 (56%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D + + D+GT  G + +AL++E    + V +DI+   L+ A+++     +SE+ DT +SD
Sbjct: 17  DGMVVADVGTDHGYIPIALVQEGRCPRAVAMDINIGPLDRARAHIQAAELSEKIDTRRSD 76

Query: 157 WFSSVEG 163
               ++ 
Sbjct: 77  GMKELKA 83


>gi|307257608|ref|ZP_07539368.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863911|gb|EFM95834.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 316

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 185 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 243

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 244 DLQA--DVVVAN 253


>gi|259047392|ref|ZP_05737793.1| methyltransferase [Granulicatella adiacens ATCC 49175]
 gi|259035583|gb|EEW36838.1| methyltransferase [Granulicatella adiacens ATCC 49175]
          Length = 254

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 7/98 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I +R    I+DL +G GAV   LL          V+I  +  ++A    
Sbjct: 35  LDAVLLADFATIAERRKANIVDLCSGNGAVAF-LLSHKTTNPITAVEIQEQLYDMAMRTT 93

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174
             NG+ +R   +  D   +++G+      D I  NPPY
Sbjct: 94  QLNGLEDRITFIHQD-IRNLKGIIPKDSVDFITCNPPY 130


>gi|157363161|ref|YP_001469928.1| methyltransferase small [Thermotoga lettingae TMO]
 gi|157313765|gb|ABV32864.1| methyltransferase small [Thermotoga lettingae TMO]
          Length = 228

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K+D  ++++LG  TG VC  +  +   +  VG+D     + +A+     N +  + D + 
Sbjct: 43  KKDQRKVIELGCATGVVCAYIASKYNRYV-VGIDKDPDLIHLAQRTIQMNNLYGKVDLVN 101

Query: 155 ------SDWFSSVEGLFDVIVSNPPY 174
                 S +F++    FD+++SNPP+
Sbjct: 102 ISCKDVSKFFAAES--FDMVISNPPH 125


>gi|156084978|ref|XP_001609972.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797224|gb|EDO06404.1| conserved hypothetical protein [Babesia bovis]
          Length = 229

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 23/122 (18%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----------------ESP 120
           E   L   AL   +  I  ++++ ++++G G+G +    +K                  P
Sbjct: 29  EDTFLFIEALENDIDYILSKNMLCVMEIGCGSGYISTYFIKLLQRCGKLSPDAGSHRTIP 88

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYI 175
           F   + VDI+  A          N V ER DT+ +D F  +     + + D+++ NPPY+
Sbjct: 89  FV--ITVDINPAATMATVETLERNKVVERADTMTADMFLPLLPQRSQEVLDMVMFNPPYV 146

Query: 176 ES 177
            S
Sbjct: 147 PS 148


>gi|85711852|ref|ZP_01042907.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145]
 gi|85694249|gb|EAQ32192.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145]
          Length = 293

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 3/72 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +I+D G G+G + +A LK       +G+DI  +AL   + NA  N V+++FD    +   
Sbjct: 161 QIVDFGCGSGILGIAALKLG-SAHALGIDIDKQALISTQENAERNHVADKFDVYLPEQHP 219

Query: 160 SVEGLFDVIVSN 171
           +++   D++++N
Sbjct: 220 NLQA--DIVLAN 229


>gi|116747715|ref|YP_844402.1| type 11 methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116696779|gb|ABK15967.1| Methyltransferase type 11 [Syntrophobacter fumaroxidans MPOB]
          Length = 279

 Score = 35.4 bits (80), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 96  RDVVRILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFD 151
           R+   +LDLG+G G  C LA  K  P  + +GVD++ + +  A+ NA+  G +    RF 
Sbjct: 78  REGETVLDLGSGAGFDCFLAAAKVGPSGRVIGVDMTPEMIAKAQENALKGGYANTEFRFG 137

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
            +++      +   DVIVSN
Sbjct: 138 EIEN--LPVEDSSVDVIVSN 155


>gi|228477190|ref|ZP_04061828.1| methyltransferase [Streptococcus salivarius SK126]
 gi|228251209|gb|EEK10380.1| methyltransferase [Streptococcus salivarius SK126]
          Length = 254

 Score = 35.4 bits (80), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKS 139
           +DS L    P+I K+ +  I+DL +G GAV L  +   E+P      V++  +  ++AK 
Sbjct: 33  IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGLFASTRTEAPI---TLVELQERLADMAKR 87

Query: 140 NAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178
           +   N + ++   +  D  +    +     D+I+ NPPY ++ 
Sbjct: 88  SVTLNQLEDQVSVVNDDLKNLLDHAPRSQVDLILCNPPYFKAT 130


>gi|237745481|ref|ZP_04575961.1| 23S rRNA 5-methyluridine methyltransferase [Oxalobacter formigenes
           HOxBLS]
 gi|229376832|gb|EEO26923.1| 23S rRNA 5-methyluridine methyltransferase [Oxalobacter formigenes
           HOxBLS]
          Length = 451

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 14/95 (14%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L  IEK D  RI DL  G G   L + + +   + VG++ S    E AK +A+ NG+
Sbjct: 287 AIRLLEIEKND--RIADLFCGLGNFSLPIARHA--AEVVGIEGSEILTERAKESALLNGL 342

Query: 147 SER--------FDTLQSDWFSSVEGLFDVIVSNPP 173
            E+        F+    DW     G FD ++ +PP
Sbjct: 343 EEKTRFETRNLFEMTVKDWIGL--GPFDKVLIDPP 375


>gi|50914743|ref|YP_060715.1| methyltransferase [Streptococcus pyogenes MGAS10394]
 gi|50903817|gb|AAT87532.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
          Length = 384

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           G DI  + +EIAKSNA   G+S+   F  ++   F + + +  V++SNPPY E ++ D
Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317


>gi|256789367|ref|ZP_05527798.1| hypothetical protein SlivT_33188 [Streptomyces lividans TK24]
          Length = 410

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 269 RVVDLGCGNGVVGTAVALADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 328

Query: 160 SV-EGLFDVIVSNPPY 174
            V +G  D++++NPP+
Sbjct: 329 GVPDGSVDLVLNNPPF 344


>gi|154496468|ref|ZP_02035164.1| hypothetical protein BACCAP_00760 [Bacteroides capillosus ATCC
           29799]
 gi|150274551|gb|EDN01628.1| hypothetical protein BACCAP_00760 [Bacteroides capillosus ATCC
           29799]
          Length = 325

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  ++LDLG G+G + +A L     +   GVDI  KA+ +A  NA  NG+ +   T+++
Sbjct: 180 KDGDQVLDLGCGSGILSIAALCLGAKY-AFGVDIDPKAVGVAYENAEMNGIGKDIYTVRA 238


>gi|114771196|ref|ZP_01448616.1| ribosomal protein L11 methyltransferase, putative [alpha
           proteobacterium HTCC2255]
 gi|114548121|gb|EAU51008.1| ribosomal protein L11 methyltransferase, putative [alpha
           proteobacterium HTCC2255]
          Length = 289

 Score = 35.4 bits (80), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 20/111 (18%)

Query: 80  LLVDSALAF-------------SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           LL+++A+AF             +L ++ K   +   I+D+G GT  + +A     P  K 
Sbjct: 116 LLIEAAMAFGTGHHGTTKGCLTALDKLVKTGFIGKNIVDIGCGTAVLAMAAALCWPG-KV 174

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
           +  DI   A E +K+NA+ N +S+R D +    F   E      +D+I++N
Sbjct: 175 LASDIDEIATETSKANAIANDLSDRIDVITCAGFDHPELRAAAPYDLILAN 225


>gi|332559004|ref|ZP_08413326.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N]
 gi|332276716|gb|EGJ22031.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 291

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  F
Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209

Query: 159 S----SVEGLFDVIVSN 171
                +    FD++ +N
Sbjct: 210 DHPDIAAAAPFDLVFAN 226


>gi|325964616|ref|YP_004242522.1| methyltransferase family protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470703|gb|ADX74388.1| methyltransferase family protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 545

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG--------- 145
           +R   R LDLGTG G     LL           DIS +AL   + N + N          
Sbjct: 183 RRHTERALDLGTGCGVQAFHLLHHCEHV--TATDISERALAFTRFNILLNAEALSVDPAR 240

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           ++ER           V G  F ++VSNPP++
Sbjct: 241 LAERVSLRLGSLLDPVAGEEFGLVVSNPPFV 271


>gi|294506164|ref|YP_003570222.1| RNA methylase family UPF0020 [Salinibacter ruber M8]
 gi|294342492|emb|CBH23270.1| Putative RNA methylase family UPF0020 [Salinibacter ruber M8]
          Length = 247

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG+G G + +A  +     +G+GV+I  + +  A+ NA   GVS+  +  Q D F +
Sbjct: 104 VIDLGSGDGRIPIAAAQRH-GARGIGVEIDPELIAKARENAEAAGVSDLVEFRQGDLFEA 162


>gi|139473312|ref|YP_001128027.1| RNA methylase family protein [Streptococcus pyogenes str. Manfredo]
 gi|134271558|emb|CAM29782.1| putative RNA methylase family protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 384

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           G DI  + +EIAKSNA   G+S+   F  ++   F + + +  V++SNPPY E ++ D
Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317


>gi|77464128|ref|YP_353632.1| 50S ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388546|gb|ABA79731.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 291

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  F
Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209

Query: 159 S----SVEGLFDVIVSN 171
                +    FD++ +N
Sbjct: 210 DHPDIAAAAPFDLVFAN 226


>gi|51246614|ref|YP_066498.1| hypothetical protein DP2762 [Desulfotalea psychrophila LSv54]
 gi|50877651|emb|CAG37491.1| hypothetical protein DP2762 [Desulfotalea psychrophila LSv54]
          Length = 210

 Score = 35.4 bits (80), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-TNGVSERFDTLQSD 156
           ILDLG G G     LLK    ++  GVD+S + +E+AK NA  TN   +   T+ SD
Sbjct: 48  ILDLGCGPGNNANFLLKADRGYQIEGVDLSAQMIELAKKNAPDTNFRVQDIRTITSD 104


>gi|296123150|ref|YP_003630928.1| methyltransferase type 11 [Planctomyces limnophilus DSM 3776]
 gi|296015490|gb|ADG68729.1| Methyltransferase type 11 [Planctomyces limnophilus DSM 3776]
          Length = 240

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR  T  +   AL+ SLP         ILD+GTGT  + L    +  +   + VD+S   
Sbjct: 48  PRDATTPVFTPALSTSLPPT-------ILDVGTGTARIPLEFCLQVDWGHILAVDLSPAM 100

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSN 171
           LEIA+ N   +   +R    Q+      +    F +++SN
Sbjct: 101 LEIAQENVHASSYRDRITLRQTTTTPLLAEAARFQIVMSN 140


>gi|195941222|ref|ZP_03086604.1| hypothetical protein EscherichcoliO157_33337 [Escherichia coli
           O157:H7 str. EC4024]
          Length = 336

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157
            I+DLG G G + L LL ++P    V  D S  A+  ++ N  TN     +R + + ++ 
Sbjct: 231 EIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVETNMPDALDRCEFMINNA 290

Query: 158 FSSVEGL-FDVIVSNPPY 174
            S VE   F+ +  NPP+
Sbjct: 291 LSGVEPFRFNAVFCNPPF 308


>gi|194709257|pdb|3DMF|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adomet
 gi|194709258|pdb|3DMG|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adohcy
 gi|194709259|pdb|3DMH|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adomet And Guanosine
          Length = 381

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108
           WR F + R+  +  TF   P   +   VD A    L  +++R   + VR   +LDLG G 
Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244

Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           GA+ L L +      GV  D++      K LE   +NA+      +   L SD   ++  
Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295

Query: 162 EGLFDVIVSNPPY 174
           E  FD+IV+NPP+
Sbjct: 296 EARFDIIVTNPPF 308


>gi|16579865|gb|AAL26680.1| unknown [Staphylococcus aureus]
          Length = 111

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           L R +  + +R+LD+G  TG V   + K      + VGVD++   L+IA  N   N VS 
Sbjct: 12  LDRAQIEEGMRVLDIGCATGEVTQLIAKRVGANGEVVGVDVNESLLKIANENNQYNNVSY 71

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           ++  +         G FD IV 
Sbjct: 72  QYSDIYH--LPDTMGHFDAIVG 91


>gi|55980502|ref|YP_143799.1| ribosomal RNA small subunit methyltransferase [Thermus thermophilus
           HB8]
 gi|262118483|pdb|2ZUL|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
           Methyltransferase Rsmc (Ttha0533) In Complex With
           Cofactor S-Adenosyl-L-Methionine
 gi|281500681|pdb|2ZWV|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
           Methyltransferase Rsmc (Ttha0533)
 gi|55771915|dbj|BAD70356.1| probable ribosomal RNA small subunit methyltransferase [Thermus
           thermophilus HB8]
          Length = 375

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108
           WR F + R+  +  TF   P   +   VD A    L  +++R   + VR   +LDLG G 
Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244

Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           GA+ L L +      GV  D++      K LE   +NA+      +   L SD   ++  
Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295

Query: 162 EGLFDVIVSNPPY 174
           E  FD+IV+NPP+
Sbjct: 296 EARFDIIVTNPPF 308


>gi|312218222|emb|CBX98168.1| similar to RNA methylase family protein [Leptosphaeria maculans]
          Length = 263

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
           I+D   G G   +AL +   + +  G++   K L+ AK NA   GV  +   L+ D    
Sbjct: 75  IIDAFAGVGGNAIALARSGRWDRVFGIEKDAKTLKCAKHNAEIYGVGGKIFWLEGDCFEV 134

Query: 158 ---FSSVEGLFDVIVSNPPY 174
              F   EGL  V+ ++PP+
Sbjct: 135 MRRFKGTEGL--VVFASPPW 152


>gi|297572137|ref|YP_003697911.1| rRNA (guanine-N(2)-)-methyltransferase [Arcanobacterium
           haemolyticum DSM 20595]
 gi|296932484|gb|ADH93292.1| rRNA (guanine-N(2)-)-methyltransferase [Arcanobacterium
           haemolyticum DSM 20595]
          Length = 368

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G GAV  ALL+    F     DIS  A+E  K   V     E  D +   W +S
Sbjct: 230 VLDFGCGNGAVSRALLEAGIGFV-CATDISADAVESTKLTLV-----EYKDRVDVSWDTS 283

Query: 161 VEGLFD----VIVSNPPYIESVIVD 181
            + + D     ++ NPP+ +   VD
Sbjct: 284 AQCMGDESVGAVLLNPPFHDGFAVD 308


>gi|169350578|ref|ZP_02867516.1| hypothetical protein CLOSPI_01346 [Clostridium spiroforme DSM 1552]
 gi|169292898|gb|EDS75031.1| hypothetical protein CLOSPI_01346 [Clostridium spiroforme DSM 1552]
          Length = 226

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G  C   +     +  +G+DIS K LE+AK+      +  R   ++   FS 
Sbjct: 29  VLDLGCGYGWHCKYAIDNGARY-VLGIDISKKILEVAKNKNNDKKIDYRCIAMEDLSFS- 86

Query: 161 VEGLFDVIVS 170
            + +FD+I+S
Sbjct: 87  -KNIFDIIIS 95


>gi|46198473|ref|YP_004140.1| ribosomal RNA small subunit methyltransferase C [Thermus
           thermophilus HB27]
 gi|46196095|gb|AAS80513.1| ribosomal RNA small subunit methyltransferase C [Thermus
           thermophilus HB27]
          Length = 375

 Score = 35.4 bits (80), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108
           WR F + R+  +  TF   P   +   VD A    L  +++R   + VR   +LDLG G 
Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244

Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           GA+ L L +      GV  D++      K LE   +NA+      +   L SD   ++  
Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295

Query: 162 EGLFDVIVSNPPY 174
           E  FD+IV+NPP+
Sbjct: 296 EARFDIIVTNPPF 308


>gi|325519062|gb|EGC98560.1| ubiquinone/menaquinone biosynthesis methylase-like protein
           [Burkholderia sp. TJI49]
          Length = 209

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 101 ILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +LD+G GTGAV LA+ +      +  GVDIS + ++ A+  A  +G+  RF
Sbjct: 52  VLDVGCGTGAVTLAIAQRLGADAQCTGVDISARMIDAARVRAERSGLPVRF 102


>gi|229061790|ref|ZP_04199123.1| Biotin biosynthesis protein BioC [Bacillus cereus AH603]
 gi|229134926|ref|ZP_04263733.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST196]
 gi|228648601|gb|EEL04629.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST196]
 gi|228717536|gb|EEL69200.1| Biotin biosynthesis protein BioC [Bacillus cereus AH603]
          Length = 242

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +  S L+    R  +   +RIL+LG GTG V   L    P      VD + + + +AK+ 
Sbjct: 1   MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 60

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                V  R + ++      +E  +DVI+SN  +
Sbjct: 61  KSLGNVMFRCEDIEQ---LKLENPYDVIISNATF 91


>gi|124485044|ref|YP_001029660.1| methyltransferase [Methanocorpusculum labreanum Z]
 gi|124362585|gb|ABN06393.1| methyltransferase [Methanocorpusculum labreanum Z]
          Length = 200

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 16/105 (15%)

Query: 74  PRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDIS 130
           P P    LL ++ALA  +      + + ++DLG GTG + +  ALL  S      GVDI 
Sbjct: 29  PAPLAARLLHEAALAGDI------EGMTVVDLGCGTGMLSIGAALLGAS----VTGVDID 78

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
             AL+IA+ NA   GV   +  ++ D   + E L  D ++ NPP+
Sbjct: 79  EAALKIARKNAEKFGVDIEWLRMRID--ETAEPLSADTVLMNPPF 121


>gi|145219132|ref|YP_001129841.1| Mg-protoporphyrin IX methyl transferase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205296|gb|ABP36339.1| magnesium protoporphyrin O-methyltransferase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 232

 Score = 35.4 bits (80), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD G GTG   + + K    ++    DI+ + +E  K++A   GV+++ +  + +   S
Sbjct: 69  ILDAGCGTGLFTIRIAKAG--YRVKAADIASQMVEKTKTDATAAGVADKIE-FEVNSIES 125

Query: 161 VEGLFDVIV 169
           V G FD +V
Sbjct: 126 VSGSFDAVV 134


>gi|284166016|ref|YP_003404295.1| hypothetical protein Htur_2749 [Haloterrigena turkmenica DSM 5511]
 gi|284015671|gb|ADB61622.1| protein of unknown function Met10 [Haloterrigena turkmenica DSM
           5511]
          Length = 326

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 14/108 (12%)

Query: 79  ELLVDSALAFSLPRI--EKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           E L+D A  +  PR+  E+  VV        + D+  G G   +   K     + VGVD+
Sbjct: 147 EFLLDLAEVYFSPRLATERNRVVEQVTADEHVFDMFAGVGPFVIPFAKRG--AECVGVDV 204

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
           + +A++  + NA  NGV +R      D        EG  D IV N P+
Sbjct: 205 NPEAIDYLRENARRNGVEDRVTATCDDVREVAPGYEGWADRIVMNLPH 252


>gi|302559331|ref|ZP_07311673.1| transferase [Streptomyces griseoflavus Tu4000]
 gi|302476949|gb|EFL40042.1| transferase [Streptomyces griseoflavus Tu4000]
          Length = 509

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 16/132 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   +     +    D++ +AL I       +G     +  +
Sbjct: 166 RTPVASALDLGTGSGIQALHATRH--VTRVTATDVNPRALHITALTLALSGAPA-AELRE 222

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F+ V  +  +D+IVSNPP+   VI     L  R        DGG+ G    RT+   
Sbjct: 223 GSLFTPVRDDETYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRTLVQE 271

Query: 213 VSRHLNKDGLCS 224
               LN+ G   
Sbjct: 272 SGERLNEGGFAQ 283


>gi|209559781|ref|YP_002286253.1| hypothetical protein Spy49_1275c [Streptococcus pyogenes NZ131]
 gi|209540982|gb|ACI61558.1| hypothetical protein Spy49_1275c [Streptococcus pyogenes NZ131]
          Length = 384

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           G DI  + +EIAKSNA   G+S+   F  ++   F + + +  V++SNPPY E ++ D
Sbjct: 261 GFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRT-DKINGVVISNPPYGERLLDD 317


>gi|161528965|ref|YP_001582791.1| methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
 gi|160340266|gb|ABX13353.1| Methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
          Length = 344

 Score = 35.4 bits (80), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 90  LPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +P  EK    +++LD+G G+G     + K  P     G D S +A++ AK+ A   G+S 
Sbjct: 154 IPTYEKLHSGLKVLDVGCGSGRAINLMAKSFPNSHFTGYDFSSEAIQNAKNEAQKLGLSN 213

Query: 149 -RFDTLQSDWFSSVEGLFDVIVS 170
             F+   +  F S E  FDVI +
Sbjct: 214 VTFEKQDAANFDS-ENSFDVITA 235


>gi|325269116|ref|ZP_08135736.1| TrmA family RNA methyltransferase [Prevotella multiformis DSM
           16608]
 gi|324988503|gb|EGC20466.1| TrmA family RNA methyltransferase [Prevotella multiformis DSM
           16608]
          Length = 474

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 10/80 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF-------DTL 153
           + DL TGTG +   +  ++   K +G++   +A+E AK N+  N +S          D L
Sbjct: 331 VYDLYTGTGTIANFVAGKAR--KVIGIEYVPEAIEDAKVNSEINNISNTLFYAGDMKDIL 388

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
             D F S +G  DVI+++PP
Sbjct: 389 TED-FISRQGRPDVIITDPP 407


>gi|256375632|ref|YP_003099292.1| methyltransferase small [Actinosynnema mirum DSM 43827]
 gi|255919935|gb|ACU35446.1| methyltransferase small [Actinosynnema mirum DSM 43827]
          Length = 498

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 74  PRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P P   +L     + SL R   +R V  +LDLGTG G   L   + +        D+S +
Sbjct: 132 PVPTDHVLGVGHASISLARATSRRPVKTLLDLGTGCGVQALHAGRHAERI--TATDLSAR 189

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           AL +A +    N V  R    Q +WF  V G  FD IV NPP++
Sbjct: 190 ALALASATFRMNEVDVRLG--QGEWFGPVRGRKFDQIVCNPPFV 231


>gi|190150867|ref|YP_001969392.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|226705030|sp|B3GYL9|PRMA_ACTP7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189915998|gb|ACE62250.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 293

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|145297996|ref|YP_001140837.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|166223393|sp|A4SJL7|PRMA_AERS4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|142850768|gb|ABO89089.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 292

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ +  NA  NGV+ + +  L +D   
Sbjct: 160 VVDFGCGSGILGIAALKLG-AARVIGIDIDPQAIQASHDNAERNGVAGQIELYLPADQPQ 218

Query: 160 SVEGLFDVIVSN 171
            VE   DV+V+N
Sbjct: 219 DVEA--DVVVAN 228


>gi|126462971|ref|YP_001044085.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104635|gb|ABN77313.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 291

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  F
Sbjct: 150 AKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAGF 209

Query: 159 S----SVEGLFDVIVSN 171
                +    FD++ +N
Sbjct: 210 DHPDIAAAAPFDLVFAN 226


>gi|291286905|ref|YP_003503721.1| Methyltransferase type 11 [Denitrovibrio acetiphilus DSM 12809]
 gi|290884065|gb|ADD67765.1| Methyltransferase type 11 [Denitrovibrio acetiphilus DSM 12809]
          Length = 251

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 12/103 (11%)

Query: 83  DSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIA 137
           D+  A  + +I+K+ +    + ILD+G G+G   + L K++   K V G+DIS + L I 
Sbjct: 27  DAFEAEVIYKIQKQGIDLTKMSILDVGCGSGKFTIGLGKKA---KDVHGIDISDEMLRIL 83

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIV-SNPPYIES 177
             ++   GV+    T Q+DW S ++    FD++  S  P + S
Sbjct: 84  TEDSANEGVN-NITTQQTDWESYIKKPESFDIVFCSTTPAVRS 125


>gi|212638680|ref|YP_002315200.1| ribosomal protein L11 methyltransferase [Anoxybacillus flavithermus
           WK1]
 gi|226707856|sp|B7GKD0|PRMA_ANOFW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|212560160|gb|ACJ33215.1| Ribosomal protein L11 methylase [Anoxybacillus flavithermus WK1]
          Length = 312

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 30/141 (21%)

Query: 56  GWRDFYNV-----RLTL--SSDTFEPRPETELLV--DSALAFSL--------------PR 92
            W+ +YN      R T+  + +T+EP    EL++  D  +AF                  
Sbjct: 113 AWKKYYNPVKISERFTIVPTWETYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALEKT 172

Query: 93  IEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           ++K D V  +D+GTG+G  ++  A+L          +D+   A+E AK N   N V +  
Sbjct: 173 VKKGDTV--VDVGTGSGILSIAAAMLGAKRVH---ALDLDPVAVESAKLNVKLNKVHDVV 227

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
              Q++    ++   DVIV+N
Sbjct: 228 TVSQNNLLDRMDEQADVIVAN 248


>gi|157165717|ref|YP_001466729.1| methyltransferase small domain-containing protein [Campylobacter
           concisus 13826]
 gi|112800176|gb|EAT97520.1| methyltransferase small [Campylobacter concisus 13826]
          Length = 235

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 11/80 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----EIAKSNAVTNGVSERFDTLQ 154
           R+LD+G G G + L L ++   FK +  D+S   L     EI+  NA +N +  R  T  
Sbjct: 33  RVLDVGAGCGILGLLLKRD---FKKI--DLSMLDLLELNSEISSFNAKSNCLEARAITAD 87

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
              F   E  FD+I+SNPP+
Sbjct: 88  FANFKDSEK-FDLIISNPPF 106


>gi|85860335|ref|YP_462537.1| methyltransferase [Syntrophus aciditrophicus SB]
 gi|85723426|gb|ABC78369.1| methyltransferase [Syntrophus aciditrophicus SB]
          Length = 207

 Score = 35.4 bits (80), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILDLG GTG + +A L  S   +G G++I+    E A    V  G+S   D ++S   
Sbjct: 25  ARILDLGCGTGDL-MAFLARSRNTRGQGIEIN----ESAVYECVKKGLSVCHDDIESGLL 79

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCL 183
              +  FD ++ N    E    D L
Sbjct: 80  EYPDKSFDYVILNQSMQEVRNADAL 104


>gi|194758481|ref|XP_001961490.1| GF14906 [Drosophila ananassae]
 gi|190615187|gb|EDV30711.1| GF14906 [Drosophila ananassae]
          Length = 214

 Score = 35.4 bits (80), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +I+K+   R+LDLG G G   + L  E  + +  GVD S  A+E+AK+ A  N ++  + 
Sbjct: 54  KIDKQ--ARVLDLGCGNGMFLVGLANEG-YEQLTGVDYSANAVELAKNIAQDNQMNITYK 110

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY 174
                      G FDV+     Y
Sbjct: 111 VADLTQPQDELGAFDVVHDKGTY 133


>gi|156935630|ref|YP_001439546.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894]
 gi|229564329|sp|A7MIS8|RLMG_ENTS8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|156533884|gb|ABU78710.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           ++DLG G G + L LL ++P  K   VD S  A+  ++ N  TN     ER +   ++  
Sbjct: 230 MVDLGCGNGVIGLTLLAQNPQAKVRFVDESYMAVASSRLNVETNLPEAMERCEFQVNNAL 289

Query: 159 SSVEG-LFDVIVSNPPYIES-VIVDCLGLEV 187
           + VE   F  ++ NPP+ +   I D +  ++
Sbjct: 290 TGVEPESFHAVLCNPPFHQQHAITDHIAWQM 320


>gi|156390966|ref|XP_001635540.1| predicted protein [Nematostella vectensis]
 gi|156222635|gb|EDO43477.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 10/113 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++ L++G G GA+ +    + P  +    DI+  A++    NA  +GV      +Q+D F
Sbjct: 75  LKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVAENARLHGVETSVTAIQADVF 134

Query: 159 --SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD--PRISLDGGIDGLSHY 206
               ++G+ FD+I   PP        C G   +D D   R + D     L  Y
Sbjct: 135 DCDDLKGMKFDMIFFRPP-----AGFCEGCNEKDLDMSSRTAWDPNYSILERY 182


>gi|126658081|ref|ZP_01729233.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
 gi|126620719|gb|EAZ91436.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
          Length = 377

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+   P  + R   RILD+G   G   +A+  E P  +  G+DIS   L    + +V   
Sbjct: 190 LSERFPNFKPR---RILDMGCSAGGSTIAMAIEFPDAEVHGIDISSSMLRCGHAVSVALD 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-------SVIVDC 182
           +   +  + +   +  +G FD+IVSN  + E        VI++C
Sbjct: 247 LPIYYHQMDASHTTFGDGSFDLIVSNIVFHELPNGIRRKVILEC 290


>gi|34496439|ref|NP_900654.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum
           ATCC 12472]
 gi|38605125|sp|P60091|PRMA_CHRVO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|34102292|gb|AAQ58658.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum
           ATCC 12472]
          Length = 298

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + +A LK       VG+DI  +A+  ++ NA  NGV   F    ++  + 
Sbjct: 167 VLDYGCGSGILAIAALKLG-AASAVGIDIDQQAVRASQDNAEQNGVKADFFLPNANPAAQ 225

Query: 161 VEGLFDVIVSNP 172
            + +   I++NP
Sbjct: 226 YDVVLANILANP 237


>gi|46143540|ref|ZP_00135031.2| COG2264: Ribosomal protein L11 methylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209001|ref|YP_001054226.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae L20]
 gi|303250992|ref|ZP_07337180.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307253193|ref|ZP_07535069.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|166223391|sp|A3N2I5|PRMA_ACTP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|126097793|gb|ABN74621.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|302650149|gb|EFL80317.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306859337|gb|EFM91374.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 293

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|319939643|ref|ZP_08014002.1| RsmD family RNA methyltransferase [Streptococcus anginosus
           1_2_62CV]
 gi|319811232|gb|EFW07538.1| RsmD family RNA methyltransferase [Streptococcus anginosus
           1_2_62CV]
          Length = 179

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDL  G+G++ +  +        V V+   +A  I   N       ERF+ L+ D   
Sbjct: 44  QVLDLYAGSGSLAIEAISRG-MVSAVLVEKDRRAQAIISQNISITKEKERFELLKMDSNR 102

Query: 160 SVE---GLFDVIVSNPPYI-ESVIVDCLGLEVRDF-----------DPRISLDGGIDGLS 204
           ++E   G FD+++ +PPY  E +  D   L  R+            D  + L   I GL 
Sbjct: 103 ALELVTGQFDLVLLDPPYAKEQIAADIEKLVERELLSDDVLVVCETDKSVDLPEEIAGLG 162

Query: 205 HYRTIADGVSR 215
            ++    G+S+
Sbjct: 163 IWKQKIYGISK 173


>gi|259046669|ref|ZP_05737070.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens
           ATCC 49175]
 gi|259036834|gb|EEW38089.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens
           ATCC 49175]
          Length = 314

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 26/139 (18%)

Query: 56  GWRDFY-NVRLTL------SSDTFEPRPETELLV--DSALAF----------SLPRIEK- 95
            W+ +Y  VR+T       S   +E   + ELL+  D  LAF          SL  +E+ 
Sbjct: 113 AWKQYYFPVRVTRFLTVVPSWVDYEKEQDDELLIELDPGLAFGTGTHPTTQLSLTALEQT 172

Query: 96  -RDVVRILDLGTGTGAVCLA--LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            R    +LD+GTG+G + +A  LL  S   K    DI   A  +AK N   N      + 
Sbjct: 173 IRGNESVLDVGTGSGVLSIASKLLGAS---KVTAFDIDEMATRVAKENIALNPTIGEIEV 229

Query: 153 LQSDWFSSVEGLFDVIVSN 171
            +++    V+   D+IV+N
Sbjct: 230 FENNLLVGVDQKSDLIVAN 248


>gi|163941858|ref|YP_001646742.1| biotin biosynthesis protein BioC [Bacillus weihenstephanensis
           KBAB4]
 gi|163864055|gb|ABY45114.1| biotin biosynthesis protein BioC [Bacillus weihenstephanensis
           KBAB4]
          Length = 269

 Score = 35.4 bits (80), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +  S L+    R  +   +RIL+LG GTG V   L    P      VD + + + +AK+ 
Sbjct: 28  MAHSLLSTLKERYSETSSIRILELGCGTGYVTEQLSNLFPKAHITAVDFADEMIAVAKTR 87

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                V  R + ++      +E  +DVI+SN  +
Sbjct: 88  KSLGNVMFRCEDIEQ---LKLENPYDVIISNATF 118


>gi|327451839|gb|EGE98493.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA2]
          Length = 152

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    + +     
Sbjct: 71  LDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHACRPEEVDP- 129

Query: 162 EGLFDVIVSNPP 173
           +  FD I SNPP
Sbjct: 130 DLRFDEIWSNPP 141


>gi|303253041|ref|ZP_07339193.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307248581|ref|ZP_07530596.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648105|gb|EFL78309.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854931|gb|EFM87119.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 293

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|238854793|ref|ZP_04645123.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 269-3]
 gi|260664024|ref|ZP_05864877.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii SJ-7A-US]
 gi|282933871|ref|ZP_06339219.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 208-1]
 gi|238832583|gb|EEQ24890.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 269-3]
 gi|260561910|gb|EEX27879.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii SJ-7A-US]
 gi|281301960|gb|EFA94214.1| ribosomal RNA small subunit methyltransferase B [Lactobacillus
           jensenii 208-1]
          Length = 437

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+   +LD     G     L +     K   +DI  K L + K  A    V +R +TL  
Sbjct: 247 RENDHVLDTCAAPGGKTTQLAENLSHGKVTSLDIHKKKLNLIKKYAQRMHVDDRVETLAL 306

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLDGGIDGLSHYR----TI 209
           D   + E   D           ++VD  C GL +    P I  D  I  + +       I
Sbjct: 307 DARKAAEHFSDT------KFNKILVDAPCSGLGLLRRKPEIRYDKTIKDVHNLARIQLAI 360

Query: 210 ADGVSRHLNKDG-----LCSVEIGYNQKV 233
            D V++ L K+G      CS+ I  N++V
Sbjct: 361 LDNVAQLLKKNGELVYSTCSITIEENEQV 389


>gi|4239958|dbj|BAA74757.1| Orf375 [Thermus thermophilus]
          Length = 375

 Score = 35.4 bits (80), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 25/133 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKR---DVVR---ILDLGTGT 108
           WR F + R+  +  TF   P   +   VD A    L  +++R   + VR   +LDLG G 
Sbjct: 186 WRAF-SARILGAEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGY 244

Query: 109 GAVCLALLKESPFFKGVGVDISC-----KALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
           GA+ L L +      GV  D++      K LE   +NA+      +   L SD   ++  
Sbjct: 245 GALTLPLARMGAEVVGVEDDLASVLSLQKGLE---ANAL------KAQALHSDVDEALTE 295

Query: 162 EGLFDVIVSNPPY 174
           E  FD+IV+NPP+
Sbjct: 296 EARFDIIVTNPPF 308


>gi|314922383|gb|EFS86214.1| methyltransferase small domain protein [Propionibacterium acnes
           HL001PA1]
          Length = 505

 Score = 35.4 bits (80), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|225458633|ref|XP_002282801.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 780

 Score = 35.4 bits (80), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D  TG G   +   + S     + +DI  K +E A+ NA   GV +R D ++ D F  
Sbjct: 615 IVDCFTGVGGNAIQFAQRSKHV--IAIDIDPKKIEYAQHNAAIYGVDDRIDFIKGDSFLL 672

Query: 161 VEGL-FDVIVSNPPY 174
              L  D +  +PP+
Sbjct: 673 ASTLKADTVFLSPPW 687


>gi|154148405|ref|YP_001406871.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
 gi|153804414|gb|ABS51421.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
          Length = 235

 Score = 35.4 bits (80), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L L ++   FK   ++I  +  +I + N   N +         + F 
Sbjct: 35  KILDVGAGCGILGLLLARDFKNFKISLLEIQSENFQILRKNVTENELDCEILINDFNEFL 94

Query: 160 SVEGLFDVIVSNPPY 174
           + +  FD IVSNPP+
Sbjct: 95  TSQK-FDFIVSNPPF 108


>gi|239625789|ref|ZP_04668820.1| RNA methyltransferase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520019|gb|EEQ59885.1| RNA methyltransferase [Clostridiales bacterium 1_7_47FAA]
          Length = 462

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 12/100 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEI 136
            E+L D+A  F     E +D V + DL +GTG +   L   +P  K V GV+I  +A+E 
Sbjct: 302 AEVLYDTARGFVG---ETKDKV-VFDLYSGTGTIAQIL---APVAKKVVGVEIVEEAVEA 354

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPP 173
           AK NA  NG+ +  + +  D    ++ L    D+IV +PP
Sbjct: 355 AKVNAGLNGL-DNCEFVAGDVLKVIDDLEDKPDLIVVDPP 393


>gi|172035610|ref|YP_001802111.1| hypothetical protein cce_0694 [Cyanothece sp. ATCC 51142]
 gi|171697064|gb|ACB50045.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 359

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 81  LVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ++D A+   +P +  +  D +++LD+G G+G     L +  P  + +GVD S  A+ +A+
Sbjct: 156 VLDEAILPLVPGLTAKLSDGIKVLDVGCGSGRAISKLAQLYPRSQFIGVDFSETAIALAR 215

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           S A   G++     +Q     + E  FD+I +
Sbjct: 216 SQAQGLGLNNLKFEVQDAANLNFEQPFDLITA 247


>gi|156355071|ref|XP_001623498.1| predicted protein [Nematostella vectensis]
 gi|156210206|gb|EDO31398.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV  A      + +    ++ L++G G GA+ +    + P  +    DI+  A+E    N
Sbjct: 57  LVSMARGLLKQKSDTESFLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVAEN 116

Query: 141 AVTNGVSERFDTLQSDWF--SSVEGL-FDVIVSNPP 173
           A  +GV      +Q+D F    ++G+ FD+I    P
Sbjct: 117 ACLHGVENSVTAIQADVFDCDGLKGMKFDMIFFRQP 152


>gi|86143678|ref|ZP_01062054.1| hypothetical protein MED217_00255 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829721|gb|EAQ48183.1| hypothetical protein MED217_00255 [Leeuwenhoekiella blandensis
           MED217]
          Length = 561

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 14/109 (12%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   P  E EL+ D+A   +L +  KR ++    LG   G + +A           G+
Sbjct: 318 TKEAIPPPTEEELMRDAAYREALAKRRKRKLILTSVLGV-FGILVIA----------TGI 366

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            I+ K  +  K N + +      D L+SDW  S  G   VI+S P  +E
Sbjct: 367 LIATKGFDFVKDNFIGHPSK---DLLESDWVRSEYGYPPVIISTPRILE 412


>gi|313815328|gb|EFS53042.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA1]
 gi|315099509|gb|EFT71485.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA2]
          Length = 505

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|297798406|ref|XP_002867087.1| O-methyltransferase family 2 protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312923|gb|EFH43346.1| O-methyltransferase family 2 protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           VV ++D+G GTG     L+KE P+ KG   D+    +E+A+   V +GV    + ++ D 
Sbjct: 197 VVTVIDVGGGTGETMGILVKEFPWIKGFNFDLP-HVIEVAQ---VLDGV----ENVEGDM 248

Query: 158 FSSVEGLFDVIV 169
           F S+     VI+
Sbjct: 249 FDSIPACDAVII 260


>gi|322418261|ref|YP_004197484.1| type 11 methyltransferase [Geobacter sp. M18]
 gi|320124648|gb|ADW12208.1| Methyltransferase type 11 [Geobacter sp. M18]
          Length = 273

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           V++LD+G GTG +   L    P    VGVD++    E A  N     V  R     ++  
Sbjct: 47  VQLLDIGAGTGRLLARLADLYPDVDAVGVDLAPGMCETAARNLAGRRV--RVMNADAESL 104

Query: 159 SSVEGLFDVIVSNPPY 174
               G FDV+VS   Y
Sbjct: 105 PFEAGSFDVVVSTSTY 120


>gi|167752279|ref|ZP_02424406.1| hypothetical protein ALIPUT_00523 [Alistipes putredinis DSM 17216]
 gi|167660520|gb|EDS04650.1| hypothetical protein ALIPUT_00523 [Alistipes putredinis DSM 17216]
          Length = 469

 Score = 35.4 bits (80), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 21/117 (17%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRI------LDLGTGTGAV---CLALLKESPFF 122
           F+  P++    +SA A+ L ++  RD   +       DL TGTG +   C A        
Sbjct: 292 FKVGPKSFYQTNSAQAYELYKV-ARDFAALTGKEILYDLYTGTGTIANFCAARCA----- 345

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173
           K VGV+   +A+E A+ N+  NG+            + SD F    G  DVI+ +PP
Sbjct: 346 KVVGVEYVPEAIEDARINSTLNGIGNTVFYAGDMKAVLSDEFIRRNGRPDVIILDPP 402


>gi|330984157|gb|EGH82260.1| hypothetical protein PLA107_03915 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 182

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG---LEVRDFDPRISLDGGIDGLSHYRT 208
           T+ + W ++    FD + + P  I  V  + +G   ++   FD + S+  G++  S  + 
Sbjct: 18  TIVAVWMATKSQSFDDVFTGPVVINGVPTENIGTVSIKTERFDDKPSITFGVEAPSREKA 77

Query: 209 IADGVSR-HLNKDGLCSVEIGYNQKVD 234
           +A G++  ++  +  CSV  GY+ K D
Sbjct: 78  LAQGINEYYMGSNTSCSV-TGYHDKRD 103


>gi|313840376|gb|EFS78090.1| methyltransferase small domain protein [Propionibacterium acnes
           HL086PA1]
          Length = 505

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|229827912|ref|ZP_04453981.1| hypothetical protein GCWU000182_03304 [Abiotrophia defectiva ATCC
           49176]
 gi|229787847|gb|EEP23961.1| hypothetical protein GCWU000182_03304 [Abiotrophia defectiva ATCC
           49176]
          Length = 327

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 11/99 (11%)

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGG 199
           G+++ FD  ++ W S+   + D  + N  YIE+ I        LG E  + D ++S DG 
Sbjct: 45  GLAQTFDESKAGWDSNTAAMIDKPIHN--YIENTISSMQAAFDLGAEAVELDIKLSKDGQ 102

Query: 200 I----DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +    D    YR   +G  +    + L  +++GY    D
Sbjct: 103 LAVFHDSTLLYRCGVEGEIQDYTMEELKKMDVGYGYTAD 141


>gi|146308558|ref|YP_001189023.1| ribosomal protein L11 methylase-like protein [Pseudomonas mendocina
           ymp]
 gi|145576759|gb|ABP86291.1| Ribosomal protein L11 methylase-like protein [Pseudomonas mendocina
           ymp]
          Length = 265

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 32/58 (55%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           ++DLG+G G + ++ +++       G+D+  + +  A+ NA   GV++R    Q D F
Sbjct: 61  VIDLGSGDGRIAISAVQDHGARAAYGIDLDPERVSEARENAEREGVADRVTFEQGDLF 118


>gi|108763807|ref|YP_635096.1| hypothetical protein MXAN_6982 [Myxococcus xanthus DK 1622]
 gi|108467687|gb|ABF92872.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 287

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKA 133
           +P  +LLV++        ++ R   ++LD+G GTG+  LA+ +        VG+DIS   
Sbjct: 35  KPFEDLLVEA--------VQARGARQVLDVGCGTGSTTLAVARRLGAQGHCVGIDISAPM 86

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L  A++ A    V+  F    ++  +   G FD+++S
Sbjct: 87  LAAARARAEAEHVAASFIEANAEHHAFERGRFDMVIS 123


>gi|127511265|ref|YP_001092462.1| ribosomal protein L11 methyltransferase [Shewanella loihica PV-4]
 gi|166223439|sp|A3Q9Q5|PRMA_SHELP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|126636560|gb|ABO22203.1| LSU ribosomal protein L11P methyltransferase [Shewanella loihica
           PV-4]
          Length = 293

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +D G G+G + +A LK     K  G+DI  +A++ +K+NA  N V+++ D
Sbjct: 163 IDFGCGSGILAVAALKLG-AAKVTGIDIDYQAIDASKANAERNQVADKLD 211


>gi|104774443|ref|YP_619423.1| putative methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514542|ref|YP_813448.1| 16S RNA G1207 methylase RsmC [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103423524|emb|CAI98426.1| Putative methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093857|gb|ABJ59010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325126253|gb|ADY85583.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 200

 Score = 35.4 bits (80), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSL 90
           +++F  N  V   +H   + + G     N+ LT  +  F        + +L++  L   L
Sbjct: 3   EQYFTENPTVDHDEHHVNYHLNG----INLNLTTDAGVFSKTRVDYGSGVLIEQMLDQEL 58

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P         ILD+G G G + L   K+ P  +   VD++ +A+++A+ NA  N  +   
Sbjct: 59  PG------GNILDVGCGYGPIGLFAAKKWPGRQVDMVDVNERAMDLARRNAAAN-GAGNV 111

Query: 151 DTLQSDWFSSVEGLFDVIVSNPP 173
           +   SD +  V G + +IV+NPP
Sbjct: 112 NIFASDRYQEVFGQYAMIVTNPP 134


>gi|307262021|ref|ZP_07543676.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868304|gb|EFN00126.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 293

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|289428864|ref|ZP_06430544.1| methyltransferase, HemK family [Propionibacterium acnes J165]
 gi|289157865|gb|EFD06088.1| methyltransferase, HemK family [Propionibacterium acnes J165]
 gi|313806372|gb|EFS44879.1| methyltransferase, HemK family [Propionibacterium acnes HL087PA2]
 gi|313822013|gb|EFS59727.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA1]
 gi|313824091|gb|EFS61805.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA2]
 gi|313826458|gb|EFS64172.1| methyltransferase, HemK family [Propionibacterium acnes HL063PA1]
 gi|314926590|gb|EFS90421.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA3]
 gi|314961345|gb|EFT05446.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA2]
 gi|314980311|gb|EFT24405.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA2]
 gi|314987396|gb|EFT31487.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA2]
 gi|314989063|gb|EFT33154.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA3]
 gi|315082698|gb|EFT54674.1| methyltransferase, HemK family [Propionibacterium acnes HL027PA2]
 gi|315086057|gb|EFT58033.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA3]
 gi|315087642|gb|EFT59618.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA1]
 gi|327333296|gb|EGE75016.1| putative transferase [Propionibacterium acnes HL096PA3]
 gi|327445227|gb|EGE91881.1| methyltransferase, HemK family [Propionibacterium acnes HL013PA2]
 gi|332674647|gb|AEE71463.1| putative transferase [Propionibacterium acnes 266]
          Length = 505

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|260913627|ref|ZP_05920103.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
 gi|260632166|gb|EEX50341.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
          Length = 495

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E+I RI   ++ YN    +S       PE +  + S L F  P I+     ++L++G G 
Sbjct: 2   ENIERI---KESYNELPYISKSFVHTLPERQKAILSLLGFQTPEIKG---AKVLEIGCGF 55

Query: 109 GAVCLALLKESPFFKGVGVDISCKAL----EIAKSNAVTN 144
           G   ++    +P  +  G+D+S K +    E+ K   +TN
Sbjct: 56  GGNIISYALANPDTQFTGIDLSEKQIEGGREVVKQLGLTN 95


>gi|260596121|ref|YP_003208692.1| ribosomal protein L11 methyltransferase [Cronobacter turicensis
           z3032]
 gi|260215298|emb|CBA27241.1| Ribosomal protein L11 methyltransferase [Cronobacter turicensis
           z3032]
          Length = 293

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 15/107 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     K +GVDI  +A++ ++ NA  NGVSER +    +    
Sbjct: 162 VIDFGCGSGILAIAALKLG-AAKAIGVDIDPQAIQASRDNAERNGVSERLELYLPE-NQP 219

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS---LDGGIDGLS 204
            +   DV+V+N           L   +R+  P IS   + GG  GLS
Sbjct: 220 ADMQADVVVAN----------ILAGPLRELAPLISVLPVQGGRLGLS 256


>gi|228954206|ref|ZP_04116234.1| Methyltransferase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229071429|ref|ZP_04204651.1| Methyltransferase [Bacillus cereus F65185]
 gi|229081182|ref|ZP_04213692.1| Methyltransferase [Bacillus cereus Rock4-2]
 gi|228702226|gb|EEL54702.1| Methyltransferase [Bacillus cereus Rock4-2]
 gi|228711720|gb|EEL63673.1| Methyltransferase [Bacillus cereus F65185]
 gi|228805526|gb|EEM52117.1| Methyltransferase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 188

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL  G+G + +  L      K + VD   KA+++   N  +  V E+ +  ++D   +V
Sbjct: 46  LDLFGGSGGLGIEALSRG-IDKAIFVDRDSKAIKVIHQNLESCRVQEQAEVYRNDAERAV 104

Query: 162 EGL------FDVIVSNPPYIESVIVDCL 183
           + L      FD+I+ +PPY E  IV  +
Sbjct: 105 KALIKREMSFDLILIDPPYKEQKIVSLI 132


>gi|209965323|ref|YP_002298238.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum
           SW]
 gi|209958789|gb|ACI99425.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum
           SW]
          Length = 289

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)

Query: 102 LDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           LD+G G+G +  A+  L   P     GVDI   ++EIA  NAV N V+   D    + + 
Sbjct: 154 LDMGCGSGILGFAIARLWRMPVL---GVDIDDLSVEIAAENAVLNRVAHLVDLRAGNGYD 210

Query: 160 SVE----GLFDVIVSN 171
           + E      FD+IV+N
Sbjct: 211 TPEVRRRAPFDLIVAN 226


>gi|227827841|ref|YP_002829621.1| ribosomal protein L11 methyltransferase [Sulfolobus islandicus
           M.14.25]
 gi|227830551|ref|YP_002832331.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus
           L.S.2.15]
 gi|229579364|ref|YP_002837762.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581876|ref|YP_002840275.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus Y.N.15.51]
 gi|229585111|ref|YP_002843613.1| ribosomal protein L11 methyltransferase [Sulfolobus islandicus
           M.16.27]
 gi|238620014|ref|YP_002914840.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus M.16.4]
 gi|284998046|ref|YP_003419813.1| Ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus L.D.8.5]
 gi|227456999|gb|ACP35686.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus L.S.2.15]
 gi|227459637|gb|ACP38323.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus M.14.25]
 gi|228010078|gb|ACP45840.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012592|gb|ACP48353.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus Y.N.15.51]
 gi|228020161|gb|ACP55568.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus M.16.27]
 gi|238381084|gb|ACR42172.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus M.16.4]
 gi|284445941|gb|ADB87443.1| Ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus L.D.8.5]
 gi|323474909|gb|ADX85515.1| methyltransferase, unknown function [Sulfolobus islandicus REY15A]
 gi|323477650|gb|ADX82888.1| ribosomal protein L11 methyltransferase, putative [Sulfolobus
           islandicus HVE10/4]
          Length = 161

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  E +V   L  +  ++ + D+V   DLG G G + +   K+    K VGV+I+ + + 
Sbjct: 11  PTPEKVVRRMLEIA--KVSQDDIV--YDLGCGDGRIIITAAKDFNVKKAVGVEINDERIR 66

Query: 136 IAKSNAVTNGVSERFDTLQSDWFS 159
            A +N   NGV+ R   ++ ++F 
Sbjct: 67  EALANIEKNGVTGRASIVKGNFFE 90


>gi|78221363|ref|YP_383110.1| ribosomal L11 methyltransferase [Geobacter metallireducens GS-15]
 gi|78192618|gb|ABB30385.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 214

 Score = 35.4 bits (80), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           + RI     +R LDLG+GTG + +A ++       V VDI  KA E   +N   NG+  R
Sbjct: 54  MERIPGIAGMRCLDLGSGTGILAVAAIRLGAASV-VAVDIDPKAAESCAANVRLNGMEGR 112

Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171
             ++  +  S     +D++++N
Sbjct: 113 IFSVCGELASVGREPYDLLLAN 134


>gi|332709554|ref|ZP_08429515.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332351813|gb|EGJ31392.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 336

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G+G+  +A L+ SP  K +  D+  K  +  ++ A  + VSER   +  D+F +
Sbjct: 173 LVDVGGGSGSFAIAALESSPNLKAIVFDLP-KVRQYLENKATQHRVSERIQFISGDFFKN 231


>gi|317055290|ref|YP_004103757.1| methyltransferase small [Ruminococcus albus 7]
 gi|315447559|gb|ADU21123.1| methyltransferase small [Ruminococcus albus 7]
          Length = 409

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 15/83 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +LD  T TG+  L     +  F G      VD+S  A++ AK+NA  NG+S++ D +  D
Sbjct: 238 VLDCFTHTGSFAL-----NAAFGGAAHVTAVDVSQFAVDTAKANAERNGLSDKMDFVCGD 292

Query: 157 WFSSVEGL------FDVIVSNPP 173
            F  +  L      +D I+ +PP
Sbjct: 293 VFDLLPKLTEEKAGYDFIILDPP 315


>gi|282865355|ref|ZP_06274407.1| N-6 DNA methylase [Streptomyces sp. ACTE]
 gi|282559828|gb|EFB65378.1| N-6 DNA methylase [Streptomyces sp. ACTE]
          Length = 581

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAV-CLA- 114
           R F       S D + PR    LLVD   A     + +  ++R L D   GTG +  LA 
Sbjct: 158 RKFNEAANETSGDHYTPRDAIRLLVDLLFAEKDVDLTEGGIIRSLYDPTAGTGGMLSLAE 217

Query: 115 --LLKESPFFK-GV-GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGLFD 166
             LL E+P  K G+ G + + ++  I KS+ +  G         +TL  D F   +  FD
Sbjct: 218 EHLLAENPGAKLGLYGQEYNPQSYAICKSDLLAKGHDATNIAFGNTLTDDAFKGRQ--FD 275

Query: 167 VIVSNPPY 174
             +SNPPY
Sbjct: 276 YCMSNPPY 283


>gi|225461518|ref|XP_002282613.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|302142971|emb|CBI20266.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           R LD GTG+G + +A LK       VG+D+  +A+  A  NA  N +S
Sbjct: 210 RFLDYGTGSGILAIAALKFG-AASSVGIDVDPQAITAATQNAALNKIS 256


>gi|125975563|ref|YP_001039473.1| putative RNA methylase [Clostridium thermocellum ATCC 27405]
 gi|256005933|ref|ZP_05430877.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|281416574|ref|ZP_06247594.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|125715788|gb|ABN54280.1| putative RNA methylase [Clostridium thermocellum ATCC 27405]
 gi|255990104|gb|EEU00242.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|281407976|gb|EFB38234.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|316939680|gb|ADU73714.1| rRNA (guanine-N(2)-)-methyltransferase [Clostridium thermocellum
           DSM 1313]
          Length = 378

 Score = 35.4 bits (80), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SV 161
           D+     A+ L  +      K  G DI+  A+E+AK NA   GV +  +   SD+ + ++
Sbjct: 234 DIWKQERALALRAIDHDIKLKIYGSDINPDAIELAKENACLAGVDDCIEFFVSDFRNVNI 293

Query: 162 EGLFDVIVSNPPYIESV 178
           +  + VI+ NPPY E +
Sbjct: 294 KEDYGVIICNPPYGERI 310


>gi|326802550|ref|YP_004320369.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sphingobacterium sp. 21]
 gi|326553314|gb|ADZ81699.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sphingobacterium sp. 21]
          Length = 244

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 28/57 (49%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +ILD+ TGTG      +      K VGVDIS   L +AK      GV  +F+ +  D
Sbjct: 61  KILDVATGTGDFAFEAINILKPDKIVGVDISEGMLAVAKEKIAKRGVGNKFEVVLGD 117


>gi|307246456|ref|ZP_07528529.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255439|ref|ZP_07537246.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259891|ref|ZP_07541605.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852660|gb|EFM84892.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861623|gb|EFM93610.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866061|gb|EFM97935.1| Ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 293

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|167645559|ref|YP_001683222.1| ribosomal L11 methyltransferase [Caulobacter sp. K31]
 gi|254782837|sp|B0T1G7|PRMA_CAUSK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|167347989|gb|ABZ70724.1| ribosomal L11 methyltransferase [Caulobacter sp. K31]
          Length = 288

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           I+ R   ++LD+G GTG + +A  +       VG DI   ++ I+K NA  N  + +F
Sbjct: 145 IKARKFKKVLDVGAGTGLLAIAAARTGSRI-AVGTDIDRPSVRISKENAKVNRANAKF 201


>gi|16330344|ref|NP_441072.1| hypothetical protein sll1693 [Synechocystis sp. PCC 6803]
 gi|1652833|dbj|BAA17752.1| sll1693 [Synechocystis sp. PCC 6803]
          Length = 440

 Score = 35.0 bits (79), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 26/39 (66%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +LD+  GTGA  L +   +P  K VG+DIS ++++IA+ 
Sbjct: 62  MLDVACGTGATTLTMALANPGAKVVGIDISPESIKIAEE 100


>gi|327334815|gb|EGE76526.1| putative transferase [Propionibacterium acnes HL097PA1]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|330790811|ref|XP_003283489.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
 gi|325086599|gb|EGC39986.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
          Length = 447

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 19/99 (19%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKG---VGVDISCKALEIAKSNAVTNGVSER 149
           I+  +VV+ +D+GTG  A C+  L     FK    +G+DI   +L+ AK N   N +  +
Sbjct: 92  IDVNNVVKGIDIGTG--ASCIFPLLGVKLFKNWSFLGLDIDDSSLKFAKKNIELNSLESK 149

Query: 150 FDTLQSD--------WFSSVEG------LFDVIVSNPPY 174
               +++        +F + +G      +FD  + NPP+
Sbjct: 150 ISLFKNENKEKILFNYFQANQGEEKNEEVFDFCLCNPPF 188


>gi|320527311|ref|ZP_08028496.1| hypothetical protein HMPREF9430_00602 [Solobacterium moorei F0204]
 gi|320132335|gb|EFW24880.1| hypothetical protein HMPREF9430_00602 [Solobacterium moorei F0204]
          Length = 219

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 33/71 (46%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           V + D+GT    + +  +K     K    DI+   LEIAK N     +  + +T+ SD F
Sbjct: 16  VVLADIGTDHAFLPILAIKNKKVQKAYACDIAKGPLEIAKRNIQAENLDGQIETILSDGF 75

Query: 159 SSVEGLFDVIV 169
             V    DV+V
Sbjct: 76  EHVPTDVDVVV 86


>gi|317473462|ref|ZP_07932756.1| methyltransferase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|316899112|gb|EFV21132.1| methyltransferase domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 264

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTGTG +   L      F   G+DIS + +E AK  A    +  RF    ++    
Sbjct: 49  VLDIGTGTGVIPRNLYSHGARF--TGIDISGQQIEQAKKLAAAGHMDIRFLCTPAEDVPF 106

Query: 161 VEGLFDVIVS 170
           + G FD + +
Sbjct: 107 LPGSFDAVTA 116


>gi|295129808|ref|YP_003580471.1| methyltransferase, HemK family [Propionibacterium acnes SK137]
 gi|291375527|gb|ADD99381.1| methyltransferase, HemK family [Propionibacterium acnes SK137]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|195953728|ref|YP_002122018.1| Methyltransferase type 11 [Hydrogenobaculum sp. Y04AAS1]
 gi|195933340|gb|ACG58040.1| Methyltransferase type 11 [Hydrogenobaculum sp. Y04AAS1]
          Length = 220

 Score = 35.0 bits (79), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +LD+GT TG V     +++    G G+D+S K L+IAK 
Sbjct: 45  MLDIGTATGDVIFRAFEQNKIKTGFGIDLSIKMLKIAKQ 83


>gi|314965420|gb|EFT09519.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA2]
 gi|315104888|gb|EFT76864.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA2]
 gi|327329215|gb|EGE70975.1| putative transferase [Propionibacterium acnes HL103PA1]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|313765304|gb|EFS36668.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA1]
 gi|314916043|gb|EFS79874.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA4]
 gi|314917195|gb|EFS81026.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA1]
 gi|314921694|gb|EFS85525.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA3]
 gi|314931099|gb|EFS94930.1| methyltransferase small domain protein [Propionibacterium acnes
           HL067PA1]
 gi|314955032|gb|EFS99438.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA1]
 gi|314959071|gb|EFT03173.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA1]
 gi|314969708|gb|EFT13806.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA1]
 gi|315101984|gb|EFT73960.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA1]
 gi|315110093|gb|EFT82069.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA2]
 gi|327454510|gb|EGF01165.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA3]
 gi|327456580|gb|EGF03235.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA2]
 gi|328755561|gb|EGF69177.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA1]
 gi|328756890|gb|EGF70506.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA2]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|313906027|ref|ZP_07839380.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6]
 gi|313469140|gb|EFR64489.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6]
          Length = 426

 Score = 35.0 bits (79), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 101 ILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD  T TG+  L A L  +     + VD S  A+E A+ NA  NG+ +R D   +D F 
Sbjct: 252 VLDCFTHTGSFGLNAALGGASHV--ISVDASELAIEQARKNAELNGLQDRIDYQCADVFE 309

Query: 160 SVEGL------FDVIVSNPP 173
            +  L      FDV++ +PP
Sbjct: 310 LLPNLERQGRSFDVVILDPP 329


>gi|225870014|ref|YP_002745961.1| methylase [Streptococcus equi subsp. equi 4047]
 gi|225699418|emb|CAW92895.1| putative methylase [Streptococcus equi subsp. equi 4047]
          Length = 179

 Score = 35.0 bits (79), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL  G+G + +  +      + V V+   KA  I ++N      S++F  L+ +   
Sbjct: 44  RVLDLFAGSGGLSIEAISRG-MSEAVLVERDRKAQAIIQANIKMTKASQQFTLLKMNAER 102

Query: 160 SVE---GLFDVIVSNPPYIESVIV 180
           +++   G FDV+  +PPY +  IV
Sbjct: 103 ALDHLSGQFDVVFLDPPYAKETIV 126


>gi|313901576|ref|ZP_07835018.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM
           13965]
 gi|313468165|gb|EFR63637.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM
           13965]
          Length = 354

 Score = 35.0 bits (79), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 101 ILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           +LD+GTG+G + +A  +  +P    + +DI   A+ +A  NA  NGV+ER 
Sbjct: 190 VLDVGTGSGILAIAAARLGAPRV--LAIDIDPVAVRVAGENAAANGVAERI 238


>gi|240138279|ref|YP_002962751.1| putative ubiE/COQ5 methyltransferase family enzyme
           [Methylobacterium extorquens AM1]
 gi|240008248|gb|ACS39474.1| putative ubiE/COQ5 methyltransferase family enzyme
           [Methylobacterium extorquens AM1]
          Length = 269

 Score = 35.0 bits (79), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R++ +   R+LDL TGTG     + +     +  G DIS   L  A   A   G+   + 
Sbjct: 40  RLDPKPGERVLDLATGTGWTSRVVARRGA--QVTGADISADLLSFAAEQARAEGLDINYQ 97

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
              ++     +G FD I+S 
Sbjct: 98  LGDAERLPFADGAFDAIIST 117


>gi|165976967|ref|YP_001652560.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|226705031|sp|B0BRD1|PRMA_ACTPJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|165877068|gb|ABY70116.1| ribosomal protein L11 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 293

 Score = 35.0 bits (79), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A+  + +NA  NGV++R    L  D   
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-QAIGIDIDPQAILASGNNAEANGVADRLQLFLAKDQPQ 220

Query: 160 SVEGLFDVIVSN 171
            ++   DV+V+N
Sbjct: 221 DLQA--DVVVAN 230


>gi|311745184|ref|ZP_07718969.1| methyltransferase [Algoriphagus sp. PR1]
 gi|126577706|gb|EAZ81926.1| methyltransferase [Algoriphagus sp. PR1]
          Length = 264

 Score = 35.0 bits (79), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 74  PRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           P  +  L+  + +  SL  PRI+      +L++G+G GA    L+   P  K   VD   
Sbjct: 10  PEEQERLVEQAGILGSLIYPRIDFEGCKHVLEIGSGVGAQTKVLISLFPDLKITCVDAES 69

Query: 132 KALEIAKSN 140
           K LE AK+N
Sbjct: 70  KQLEKAKAN 78


>gi|50841731|ref|YP_054958.1| putative transferase [Propionibacterium acnes KPA171202]
 gi|289424689|ref|ZP_06426472.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|50839333|gb|AAT82000.1| putative transferase [Propionibacterium acnes KPA171202]
 gi|289155386|gb|EFD04068.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|313793197|gb|EFS41264.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA1]
 gi|313802714|gb|EFS43932.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA2]
 gi|313814581|gb|EFS52295.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA1]
 gi|314964609|gb|EFT08709.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA1]
 gi|315078373|gb|EFT50404.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA2]
 gi|315082159|gb|EFT54135.1| methyltransferase small domain protein [Propionibacterium acnes
           HL078PA1]
 gi|315106317|gb|EFT78293.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA1]
 gi|327457146|gb|EGF03801.1| methyltransferase small domain protein [Propionibacterium acnes
           HL092PA1]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|315094236|gb|EFT66212.1| methyltransferase small domain protein [Propionibacterium acnes
           HL060PA1]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|282853294|ref|ZP_06262631.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|282582747|gb|EFB88127.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|314982831|gb|EFT26923.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA3]
 gi|315091150|gb|EFT63126.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA4]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|326318108|ref|YP_004235780.1| type 12 methyltransferase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374944|gb|ADX47213.1| Methyltransferase type 12 [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 436

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 23/105 (21%)

Query: 84  SALAFSLPRIEKRDVVR--------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           + L + LP+I    ++         +LDLG GTG + + L +   F   +GVDIS K +E
Sbjct: 254 AGLKYKLPKIAAAKILERYPDKRLNVLDLGCGTGLLGVCLGRLDGFL--IGVDISIKMIE 311

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                A  + V +RF T+          L D +   P  I  V+ 
Sbjct: 312 ----QAARHNVYDRFHTVN---------LLDALRDTPSSIYDVVT 343


>gi|288940571|ref|YP_003442811.1| 50S ribosomal protein L11 methyltransferase [Allochromatium vinosum
           DSM 180]
 gi|288895943|gb|ADC61779.1| ribosomal protein L11 methyltransferase [Allochromatium vinosum DSM
           180]
          Length = 291

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + +A LK     + + VD   +AL     NA  NGV +R +    + F+ 
Sbjct: 162 VLDFGCGSGILAIAALKLG-AARAIAVDHDPQALTATHDNAQANGVLDRLEIFAPESFTD 220

Query: 161 VEGLFDVIVSN 171
                D++++N
Sbjct: 221 PS--VDIVLAN 229


>gi|148554236|ref|YP_001261818.1| 50S ribosomal protein L11P methyltransferase [Sphingomonas
           wittichii RW1]
 gi|148499426|gb|ABQ67680.1| LSU ribosomal protein L11P methyltransferase [Sphingomonas
           wittichii RW1]
          Length = 325

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           I D+GTGTG +  A     P  + +  DI   ++E+   NA  NGVS
Sbjct: 180 IADIGTGTGLLAFAARTLWPAARVIASDIDPVSIEVTAENAAVNGVS 226


>gi|87199299|ref|YP_496556.1| putative methyltransferase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134980|gb|ABD25722.1| putative methyltransferase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 275

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVTNGVSERFDTLQSDW 157
           R++D+G G G V LA+ +  P  + +GVD+S   ++ A  ++ A+ N   E  D   S W
Sbjct: 44  RVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDAARGRAGALPNLSFELADA--SSW 101

Query: 158 FSSVEGLFDVIVS 170
            +S +G  D+ VS
Sbjct: 102 -TSPQGAPDLYVS 113


>gi|15920667|ref|NP_376336.1| hypothetical protein ST0455 [Sulfolobus tokodaii str. 7]
 gi|15621450|dbj|BAB65445.1| 201aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 201

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 20/123 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++   ++ L+ +T+EP  +T LL+D      + +I K +  +++D+GTGTG + L  L  
Sbjct: 8   EYNKYKICLNDETYEPSDDTGLLLD------IIKINKGE--KVIDIGTGTGILGLHSL-- 57

Query: 119 SPFFKG----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNP 172
              F+G    + VDI+  A E           +  +  L  D          FDV + NP
Sbjct: 58  ---FQGAKEVIFVDINPFATEATLCTLRMYPFTS-YHILNCDLMECFRHNVNFDVAIFNP 113

Query: 173 PYI 175
           PY+
Sbjct: 114 PYL 116


>gi|328758427|gb|EGF72043.1| methyltransferase, HemK family [Propionibacterium acnes HL020PA1]
          Length = 505

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-----SNA---VTNGVSERFDTL 153
           LD+G G G   L L + +     V  D++ +ALE+A+     S+A   + +G    +D  
Sbjct: 170 LDMGCGCGVQSLHLSRHADHV--VATDVNPRALEMAQLTCRLSHADVDIRDG--SLYDPC 225

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D        FD+IV+NPPY+       +    RD    I  +GG  G      +  G 
Sbjct: 226 GHD-------TFDLIVTNPPYV-------MAPPSRDGQRLIYREGGFCGDGLVEAVVRGA 271

Query: 214 SRHLNKDGLCSV 225
              LN  G+  V
Sbjct: 272 PARLNDGGMLQV 283


>gi|32470475|ref|NP_863160.1| hypothetical protein pRUM_p17 [Enterococcus faecium]
 gi|57854766|ref|YP_187543.1| UbiE/COQ5 family methlytransferase [Staphylococcus epidermidis
           RP62A]
 gi|69244933|ref|ZP_00603123.1| putative methyltransferase [Enterococcus faecium DO]
 gi|146318610|ref|YP_001198322.1| hypothetical protein SSU05_0956 [Streptococcus suis 05ZYH33]
 gi|146320810|ref|YP_001200521.1| hypothetical protein SSU98_0963 [Streptococcus suis 98HAH33]
 gi|227518290|ref|ZP_03948339.1| SAM-dependent methyltransferase [Enterococcus faecalis TX0104]
 gi|253751731|ref|YP_003024872.1| methyltransferase [Streptococcus suis SC84]
 gi|255976298|ref|ZP_05426884.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256963309|ref|ZP_05567480.1| methyltransferase [Enterococcus faecalis HIP11704]
 gi|257080183|ref|ZP_05574544.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257086923|ref|ZP_05581284.1| methyltransferase [Enterococcus faecalis D6]
 gi|257090930|ref|ZP_05585291.1| methyltransferase [Enterococcus faecalis CH188]
 gi|257880797|ref|ZP_05660450.1| methyltransferase [Enterococcus faecium 1,230,933]
 gi|257883440|ref|ZP_05663093.1| methyltransferase [Enterococcus faecium 1,231,502]
 gi|257892141|ref|ZP_05671794.1| methyltransferase [Enterococcus faecium 1,231,410]
 gi|257895028|ref|ZP_05674681.1| methyltransferase [Enterococcus faecium 1,231,408]
 gi|258615889|ref|ZP_05713659.1| putative methyltransferase [Enterococcus faecium DO]
 gi|260558610|ref|ZP_05830800.1| methyltransferase [Enterococcus faecium C68]
 gi|261206731|ref|ZP_05921424.1| methyltransferase [Enterococcus faecium TC 6]
 gi|289168544|ref|YP_003446813.1| methyltransferase [Streptococcus mitis B6]
 gi|289567518|ref|ZP_06447866.1| methyltransferase [Enterococcus faecium D344SRF]
 gi|293384191|ref|ZP_06630083.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis R712]
 gi|293387991|ref|ZP_06632523.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis S613]
 gi|294622856|ref|ZP_06701798.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium U0317]
 gi|296449282|ref|ZP_06891067.1| UbiE/COQ5 family methyltransferase [Clostridium difficile NAP08]
 gi|307269463|ref|ZP_07550803.1| methyltransferase domain protein [Enterococcus faecalis TX4248]
 gi|307283563|ref|ZP_07563746.1| methyltransferase domain protein [Enterococcus faecalis TX0860]
 gi|312907074|ref|ZP_07766068.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 512]
 gi|312909730|ref|ZP_07768580.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 516]
 gi|314940271|ref|ZP_07847443.1| methyltransferase domain protein [Enterococcus faecium TX0133a04]
 gi|314943576|ref|ZP_07850336.1| methyltransferase domain protein [Enterococcus faecium TX0133C]
 gi|314948325|ref|ZP_07851716.1| methyltransferase domain protein [Enterococcus faecium TX0082]
 gi|314953219|ref|ZP_07856162.1| methyltransferase domain protein [Enterococcus faecium TX0133A]
 gi|314994383|ref|ZP_07859674.1| methyltransferase domain protein [Enterococcus faecium TX0133B]
 gi|314996090|ref|ZP_07861165.1| methyltransferase domain protein [Enterococcus faecium TX0133a01]
 gi|320152803|ref|YP_004172626.1| methyltransferase [Enterococcus faecium]
 gi|11991164|gb|AAG42231.1|AF299292_5 ORFY [Staphylococcus intermedius]
 gi|15667878|gb|AAL05548.1|AF408195_4 unknown [Enterococcus faecalis]
 gi|21886752|gb|AAM77895.1|AF516335_15 unknown [Enterococcus faecium]
 gi|28849336|gb|AAO52843.1| hypothetical protein [Enterococcus faecium]
 gi|57635999|gb|AAW52788.1| methyltransferase, UbiE/COQ5 family [Staphylococcus epidermidis
           RP62A]
 gi|68196099|gb|EAN10530.1| putative methyltransferase [Enterococcus faecium DO]
 gi|110556096|dbj|BAE98115.1| hypothetical protein [Enterococcus faecalis]
 gi|145689416|gb|ABP89922.1| hypothetical protein SSU05_0956 [Streptococcus suis 05ZYH33]
 gi|145691616|gb|ABP92121.1| hypothetical protein SSU98_0963 [Streptococcus suis 98HAH33]
 gi|227074276|gb|EEI12239.1| SAM-dependent methyltransferase [Enterococcus faecalis TX0104]
 gi|251816020|emb|CAZ51640.1| putative methyltransferase [Streptococcus suis SC84]
 gi|255969170|gb|EET99792.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256953805|gb|EEU70437.1| methyltransferase [Enterococcus faecalis HIP11704]
 gi|256988213|gb|EEU75515.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256994953|gb|EEU82255.1| methyltransferase [Enterococcus faecalis D6]
 gi|256999742|gb|EEU86262.1| methyltransferase [Enterococcus faecalis CH188]
 gi|257815025|gb|EEV43783.1| methyltransferase [Enterococcus faecium 1,230,933]
 gi|257819098|gb|EEV46426.1| methyltransferase [Enterococcus faecium 1,231,502]
 gi|257828501|gb|EEV55127.1| methyltransferase [Enterococcus faecium 1,231,410]
 gi|257831407|gb|EEV58014.1| methyltransferase [Enterococcus faecium 1,231,408]
 gi|260075348|gb|EEW63660.1| methyltransferase [Enterococcus faecium C68]
 gi|260079032|gb|EEW66730.1| methyltransferase [Enterococcus faecium TC 6]
 gi|281336196|gb|ADA62745.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium]
 gi|288908111|emb|CBJ22951.1| methyltransferase [Streptococcus mitis B6]
 gi|289160689|gb|EFD08641.1| methyltransferase [Enterococcus faecium D344SRF]
 gi|291078476|gb|EFE15840.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis R712]
 gi|291082601|gb|EFE19564.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecalis S613]
 gi|291597690|gb|EFF28840.1| methyltransferase, UbiE/COQ5 family [Enterococcus faecium U0317]
 gi|296261881|gb|EFH08691.1| UbiE/COQ5 family methyltransferase [Clostridium difficile NAP08]
 gi|306503587|gb|EFM72828.1| methyltransferase domain protein [Enterococcus faecalis TX0860]
 gi|306514211|gb|EFM82786.1| methyltransferase domain protein [Enterococcus faecalis TX4248]
 gi|310626908|gb|EFQ10191.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 512]
 gi|311289958|gb|EFQ68514.1| methyltransferase domain protein [Enterococcus faecalis DAPTO 516]
 gi|313589717|gb|EFR68562.1| methyltransferase domain protein [Enterococcus faecium TX0133a01]
 gi|313591215|gb|EFR70060.1| methyltransferase domain protein [Enterococcus faecium TX0133B]
 gi|313594726|gb|EFR73571.1| methyltransferase domain protein [Enterococcus faecium TX0133A]
 gi|313597743|gb|EFR76588.1| methyltransferase domain protein [Enterococcus faecium TX0133C]
 gi|313640515|gb|EFS05095.1| methyltransferase domain protein [Enterococcus faecium TX0133a04]
 gi|313645242|gb|EFS09822.1| methyltransferase domain protein [Enterococcus faecium TX0082]
 gi|315026302|gb|EFT38234.1| methyltransferase domain protein [Enterococcus faecalis TX2137]
 gi|315163445|gb|EFU07462.1| methyltransferase domain protein [Enterococcus faecalis TX0645]
 gi|315163604|gb|EFU07621.1| methyltransferase domain protein [Enterococcus faecalis TX1302]
 gi|319739755|gb|ADV60073.1| methyltransferase [Enterococcus faecium]
 gi|323464895|gb|ADX77048.1| putative methyltransferase [Staphylococcus pseudintermedius ED99]
          Length = 244

 Score = 35.0 bits (79), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           R+LDLG G G  C+  + E+     VGVDIS K LE+AK
Sbjct: 45  RVLDLGCGYGWHCIYAM-ENGASSVVGVDISHKMLEVAK 82


>gi|297193024|ref|ZP_06910422.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719846|gb|EDY63754.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 484

 Score = 35.0 bits (79), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 15/121 (12%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +AL   +     +G  E  D  +   F  V
Sbjct: 148 LDLGTGSGIQALHAAQHA--TRVTATDLNPRALHFTRLTLALSGARE-ADLREGSLFEPV 204

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +D+IVSNPP+   VI     L  R        DGG+ G    R++       LN  
Sbjct: 205 GSDTYDLIVSNPPF---VISPGARLTYR--------DGGMGGDDLCRSLVQQAGDRLNDG 253

Query: 221 G 221
           G
Sbjct: 254 G 254


>gi|51594888|ref|YP_069079.1| type I restriction-modification system, methyltransferase subunit
           (N-6 DNA methylase) [Yersinia pseudotuberculosis IP
           32953]
 gi|51588170|emb|CAH19777.1| putative type I restriction-modification system, methyltransferase
           subunit (N-6 DNA Methylase) [Yersinia pseudotuberculosis
           IP 32953]
          Length = 863

 Score = 35.0 bits (79), Expect = 9.8,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 30/141 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129
           E  +L+ + +A+ L   + +D ++I D  +G+G++ + +        K          ++
Sbjct: 192 EVSVLMSNIIAYEL---KHKDTIKIYDPTSGSGSLLINIGEAFEKYAKNKDSITYYAQEL 248

Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDW----FSSVEGLF-----DVIVSNPPY 174
                 + + N +  G+      +   DTL+ DW     S  +G +     D +VSNPPY
Sbjct: 249 KANTYNLTRMNLIMRGIKASNIKTRNGDTLEDDWPFFDDSDPQGSYYALHVDAVVSNPPY 308

Query: 175 IESVIVDCLGLEVRDFDPRIS 195
            ++          +D DPR S
Sbjct: 309 SQN-----WDPSFKDSDPRYS 324


>gi|21219557|ref|NP_625336.1| hypothetical protein SCO1041 [Streptomyces coelicolor A3(2)]
 gi|8894830|emb|CAB96026.1| conserved hypothetical protein SCG20A.21 [Streptomyces coelicolor
           A3(2)]
          Length = 407

 Score = 35.0 bits (79), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 266 RVVDLGCGNGVVGTAVSLADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 325

Query: 160 SV-EGLFDVIVSNPPY 174
            V +G  D++++NPP+
Sbjct: 326 GVPDGSVDLVLNNPPF 341


>gi|153948702|ref|YP_001402490.1| type I restriction-modification system, M subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960197|gb|ABS47658.1| type I restriction-modification system, M subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 863

 Score = 35.0 bits (79), Expect = 9.8,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 30/141 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------LKESPFFKGVGVDI 129
           E  +L+ + +A+ L   + +D ++I D  +G+G++ + +        K          ++
Sbjct: 192 EVSVLMSNIIAYEL---KHKDTIKIYDPTSGSGSLLINIGEAFEKYAKNKDSITYYAQEL 248

Query: 130 SCKALEIAKSNAVTNGV------SERFDTLQSDW----FSSVEGLF-----DVIVSNPPY 174
                 + + N +  G+      +   DTL+ DW     S  +G +     D +VSNPPY
Sbjct: 249 KANTYNLTRMNLIMRGIKASNIKTRNGDTLEDDWPFFDDSDPQGSYYALHVDAVVSNPPY 308

Query: 175 IESVIVDCLGLEVRDFDPRIS 195
            ++          +D DPR S
Sbjct: 309 SQN-----WDPSFKDSDPRYS 324


>gi|325269725|ref|ZP_08136336.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM
           16608]
 gi|324987926|gb|EGC19898.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM
           16608]
          Length = 288

 Score = 35.0 bits (79), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           R+LD G GTG + +   K     + V  DI   ++  A+ NA  NGV    D L+ D   
Sbjct: 154 RVLDCGCGTGILSIVAAK-CGAKEAVCYDIDEWSVRNAQHNAELNGV--EIDVLEGDKSV 210

Query: 158 FSSVEGLFDVIVSN 171
            S + G+FD+I++N
Sbjct: 211 LSHISGVFDIIMAN 224


>gi|298530216|ref|ZP_07017618.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509590|gb|EFI33494.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 295

 Score = 35.0 bits (79), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           LDLGTG+G + +A  +      G+GVDI   A+E A+ N   N V E F+
Sbjct: 149 LDLGTGSGILGIACSRLG--MSGLGVDIDPVAVENAQENTRINRVGEMFE 196


>gi|171185152|ref|YP_001794071.1| putative RNA methylase [Thermoproteus neutrophilus V24Sta]
 gi|170934364|gb|ACB39625.1| putative RNA methylase [Thermoproteus neutrophilus V24Sta]
          Length = 224

 Score = 35.0 bits (79), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+ +   GTGA+   + +   +   VG D+  KAL+IAK N        R D + SD   
Sbjct: 95  RVWEPFVGTGAIAYEVERAGGYV--VGGDVDEKALKIAKLNI-------RGDVVLSDVLL 145

Query: 160 SVEGLFDVIVSNPPY 174
                FD +V +PPY
Sbjct: 146 PPVSKFDAVVGDPPY 160


>gi|134099157|ref|YP_001104818.1| SAM-dependent O-methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133911780|emb|CAM01893.1| SAM-dependent O-methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 412

 Score = 35.0 bits (79), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 7/72 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVD---ISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           ++D+G G G +  A+L+E+P   G+  D   +SC A+   +  +  +    RF ++  D+
Sbjct: 225 VVDIGGGNGTLLRAILRENPEVSGILFDREHVSCNAVAEHEDASYRS----RFSSVAGDF 280

Query: 158 FSSVEGLFDVIV 169
           F+ V G  D+ +
Sbjct: 281 FAEVPGSGDIYL 292


>gi|154251180|ref|YP_001412004.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1]
 gi|154155130|gb|ABS62347.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1]
          Length = 260

 Score = 35.0 bits (79), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 12/98 (12%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA S+P    R+  R L+ G G G   L L       +  G+++  +   +A  N   NG
Sbjct: 38  LAASVP---AREGERALEAGAGVGVASLCLASRVSGLEVAGIELQPELARLASENIARNG 94

Query: 146 VSERFDTLQSDWFSSVEGLFDV---------IVSNPPY 174
           ++ER   +  D    V  L  +         + +NPP+
Sbjct: 95  LAERVSIVTGDIGHPVRNLAAMGLEPNGWHHVFANPPF 132


Searching..................................................done


Results from round 2




>gi|254780875|ref|YP_003065288.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040552|gb|ACT57348.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 264

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF
Sbjct: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP
Sbjct: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV
Sbjct: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE
Sbjct: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           SRKLFLVNAFKDYGGNDRVLLFCR
Sbjct: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264


>gi|315122703|ref|YP_004063192.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313496105|gb|ADR52704.1| protoporphyrinogen oxidase (methyltransferase) protein [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 293

 Score =  332 bits (852), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 189/264 (71%), Positives = 222/264 (84%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +Q LR+  SFLC VTGLSS QVI  PD++LDD QR  L  A++RSL +ESIHRI GWRDF
Sbjct: 30  LQGLRNPRSFLCGVTGLSSCQVIACPDTILDDEQRLLLKKAVIRSLNYESIHRICGWRDF 89

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           YNVRL LSSDTFEPRPETELLVDS L+F L +  K+   RILDLG G+GA+CLALLKE+ 
Sbjct: 90  YNVRLALSSDTFEPRPETELLVDSILSFFLSQRGKKKDARILDLGMGSGAICLALLKENS 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           FF+G+GVDIS KALEIA+ NAV NG+S+RF  LQS+WFSS+EG FD+IVSNPPYIES +V
Sbjct: 150 FFEGLGVDISSKALEIARKNAVANGLSKRFSALQSNWFSSIEGFFDIIVSNPPYIESAVV 209

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D LG EV++FDP I+LDGG DGLSHYR IADGVSRHL+K+G C +EIGYNQK+DV+RIFE
Sbjct: 210 DKLGPEVKNFDPVIALDGGPDGLSHYRVIADGVSRHLSKNGFCGLEIGYNQKIDVIRIFE 269

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
            +KLFLVN+FKDY  NDR+LLFCR
Sbjct: 270 DKKLFLVNSFKDYEKNDRILLFCR 293


>gi|303240124|ref|ZP_07326645.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetivibrio cellulolyticus CD2]
 gi|302592393|gb|EFL62120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetivibrio cellulolyticus CD2]
          Length = 296

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 144/259 (55%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + + LC V G     +    D +L++ Q      AI R +  E +  I G ++F ++   
Sbjct: 41  AGAILCHVLGCDKAYLYSHDDYILNNSQFNSFLEAIKRRINGEPLQYITGSQEFMSLDFI 100

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S D   PR +TE+LV+S + F+      +  + ILD+GTG+G + ++L       +   
Sbjct: 101 VSPDVLIPRQDTEILVESVIQFA----SGKGNIDILDVGTGSGCIAISLAYFIKNSRVTA 156

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
           VDIS  ALE+A+ NA   GV +R   ++S+ F +V  G FD+IVSNPPYI    ++ L  
Sbjct: 157 VDISKGALEMARKNAQKCGVEDRITFIESNLFDNVTSGDFDIIVSNPPYIPVQDIETLEK 216

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V+DF+PR +LDGG DGL  YR I     R+L  +GL + E+GY+Q  +V++I +     
Sbjct: 217 QVKDFEPRSALDGGCDGLDFYRRITKDSIRYLKPNGLLAFEVGYDQSQEVLKIMKDS-FD 275

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   +D  G +RV++  R
Sbjct: 276 NLKIERDLAGIERVVMGIR 294


>gi|326202287|ref|ZP_08192156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium papyrosolvens DSM 2782]
 gi|325987405|gb|EGD48232.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium papyrosolvens DSM 2782]
          Length = 284

 Score =  312 bits (800), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 141/263 (53%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            ++++   LC+V       +    D  L   +R  L N + +  K+  +  I+G  +F +
Sbjct: 22  PVQEAGVMLCQVLNCGRAYLYAHGDRELSTDERAVLDNMLAQRAKNTPLQYIIGDTEFMS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  ++     PR +TE+LV+  +   L +      +++LD+ TG+G + +++    P  
Sbjct: 82  LKFIVTPAVLIPRQDTEVLVEKVIE--LAKKSSNAGLKVLDMCTGSGCIAVSIAHFCPES 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
             V  DIS +A+++AK+N+  NGV  R +    D F +++G   FD IVSNPPYIE+ I+
Sbjct: 140 SIVACDISEEAIKVAKANSDLNGVQNRVEFFCGDLFEALKGSYKFDFIVSNPPYIETEII 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR ++P ++LDGG DGL  Y+ I      +LN  G  + EIG+NQ   V  + E
Sbjct: 200 IGLQKEVRSYEPELALDGGADGLDFYKIITVKAPEYLNNLGWLAFEIGFNQGERVSALME 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   KDYGGNDRV++  
Sbjct: 260 ES-FINIQVIKDYGGNDRVVIGQ 281


>gi|240147056|ref|ZP_04745657.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis L1-82]
 gi|257200779|gb|EEU99063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis L1-82]
 gi|291538248|emb|CBL11359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis XB6B4]
          Length = 281

 Score =  311 bits (797), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  V  +      +  +  + + Q      A+ +  +H  +  I+G  +F 
Sbjct: 21  DAKIDAWLLLEMVCKIDRSFYYLHMEDEVAEEQLSEYEIALRKRAEHVPLQYIVGEAEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  ++S+   PR +TE LV+ AL    P       +++LDL TG+G + ++++   P 
Sbjct: 81  GLKFKVNSNVLIPRQDTETLVEEALKVVKP------GMKVLDLCTGSGCIIVSIVHNVPE 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G   DIS +AL +AK NA  N VS  F+  +SD F +V G +DVIVSNPPYI +  V 
Sbjct: 135 VEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDNVTGTYDVIVSNPPYIRTGEVV 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++F+P  +LDG  DGL  YR I      +L   G    EIGY+Q   V  + + 
Sbjct: 193 KLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPGGHILFEIGYDQGEAVSGLLKE 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD   NDRV+
Sbjct: 253 AGFKNVTVIKDLAHNDRVV 271


>gi|209551099|ref|YP_002283016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209536855|gb|ACI56790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 286

 Score =  311 bits (797), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 122/262 (46%), Positives = 164/262 (62%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +  +  LS  +++      L   Q   L+ A+ R L HE +HRILG R+FY
Sbjct: 23  DPATDARLLVAGLLKLSPTELLTRSAERLSPEQAEVLSKAVERRLGHEPVHRILGEREFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS++T EPRP+TE+LVD+ LA      +++  + ILD+GTGTGA+CLALL E P 
Sbjct: 83  GLPLALSAETLEPRPDTEILVDTVLACLKDLAKEQSHLHILDVGTGTGAICLALLSECPD 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG DIS  AL  A+SNA  NG+ +RF  +QS WF S++G F  IVSNPPYI S ++ 
Sbjct: 143 ASGVGSDISADALRTARSNAERNGLQDRFQAVQSRWFESIQGSFHAIVSNPPYIASNVIH 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  FDP  +LDGG DGL  YR IA   +R +  DG+  +EIGY+Q+ DV  IFE+
Sbjct: 203 DLAPEVTKFDPVAALDGGPDGLDAYRAIAKDAARFMRPDGVVGLEIGYDQRNDVTAIFEA 262

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    + + KDYG NDRVL+F 
Sbjct: 263 KGFKCLKSVKDYGQNDRVLVFA 284


>gi|291535753|emb|CBL08865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseburia intestinalis M50/1]
          Length = 281

 Score =  311 bits (797), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  V  +      +  +  + + Q      A+ +  +H  +  I+G  +F 
Sbjct: 21  DAKIDAWLLLEMVCKIDRSFYYLHMEDEVAEEQLSEYEIALRKRAEHVPLQYIVGEAEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  ++S+   PR +TE LV+ AL    P       +++LD+ TG+G + ++++   P 
Sbjct: 81  GLKFKVNSNVLIPRQDTETLVEEALKVVKP------GMKVLDMCTGSGCIIVSIVHNIPE 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G   DIS +AL +AK NA  N VS  F+  +SD F +V G +DVIVSNPPYI +  V 
Sbjct: 135 VEGTATDISKQALLVAKENAKLNQVSVTFE--RSDLFDNVTGTYDVIVSNPPYIRTGEVV 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++F+P  +LDG  DGL  YR I      +L   G    EIGY+Q   V  + + 
Sbjct: 193 KLMPEVQEFEPMEALDGKEDGLYFYRKIIKECKAYLKPGGHILFEIGYDQGEAVSGLLKE 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD   NDRV+
Sbjct: 253 AGFKNVTVIKDLAHNDRVV 271


>gi|332716893|ref|YP_004444359.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3]
 gi|325063578|gb|ADY67268.1| protoporphyrinogen oxidase protein [Agrobacterium sp. H13-3]
          Length = 289

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 129/263 (49%), Positives = 167/263 (63%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             L D+   +  VTG S    ++ PD  +   +   +   + R    E +HRILG R+F+
Sbjct: 27  DPLLDARLLVADVTGFSLTDFVMKPDHPVTREESARIAAMVERRAGGEPVHRILGHREFH 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS++T EPRP+TE+LVD+ L      +  +   RILDLGTGTGA+CLALLKE P 
Sbjct: 87  GLDLLLSTETLEPRPDTEVLVDTLLPALKKIVADKGSARILDLGTGTGAICLALLKECPE 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG DIS  ALE A  NA  NG++ RF+T++SDWF  + G FD+IVSNPPYI S IV 
Sbjct: 147 ATGVGSDISADALETAAKNAARNGLASRFETMRSDWFKKISGRFDIIVSNPPYIRSDIVT 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +LDGG DGL+ YR IA    R L ++G+  VEIG++Q++DV  IF S
Sbjct: 207 TLDREVRHHDPMAALDGGQDGLAPYRLIAADAGRFLVENGIVGVEIGFDQRLDVSAIFAS 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
               L++A KDYGGNDRVL F R
Sbjct: 267 HGFSLLDAVKDYGGNDRVLTFRR 289


>gi|15890802|ref|NP_356474.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58]
 gi|15159087|gb|AAK89259.1| protoporphyrinogen oxidase [Agrobacterium tumefaciens str. C58]
          Length = 289

 Score =  310 bits (795), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 125/263 (47%), Positives = 166/263 (63%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             L D+   +  VTG S    ++ P+  +   +   +   I R  + E +HRILG R+F+
Sbjct: 27  DPLVDARLLIADVTGFSLTDFVMKPEHPVTQDESARIAAMIERRAEGEPVHRILGHREFH 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS +T EPRP+TE+LVD+ L      + ++   RILDLGTGTGA+CLALLKE   
Sbjct: 87  GLDLLLSKETLEPRPDTEVLVDTLLPALKEAVSRKGSARILDLGTGTGAICLALLKECAQ 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G DIS  ALE A  NA  NG+  RF+T++S+WF  + G FD+IVSNPPYI + IV 
Sbjct: 147 ASGIGSDISADALETAAKNAARNGLDSRFETIRSNWFEKISGRFDIIVSNPPYIRTDIVA 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+ DP  +LDGG DGL+ YR IA    R L ++G   VEIG++Q++DV  IF S
Sbjct: 207 TLDPEVRNHDPMAALDGGQDGLAPYRLIAADAGRFLVENGTVGVEIGFDQRLDVSAIFAS 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
               L++A KDYGGNDRVL F R
Sbjct: 267 HGFSLLDAVKDYGGNDRVLTFRR 289


>gi|291532655|emb|CBL05768.1| [protein release factor]-glutamine N5-methyltransferase [Megamonas
           hypermegale ART12/1]
          Length = 293

 Score =  308 bits (791), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 1/263 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G     + V  D  ++ ++       + +  +H  +  ILG R+F  
Sbjct: 29  ARLDAEVLLSHVLGQKRIYLYVHFDEPMEAKELAKFREYVAKRARHIPVAYILGQREFMG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ DT  PRP+TE+LV++ +A        +    I+D+GTG+GA+ L+LLK  P  
Sbjct: 89  LDFKVTKDTLIPRPDTEILVENTIAKVNENFGDKQSYDIVDIGTGSGAIILSLLKNLPKA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           KG  VDIS   + +AK NA    V +R +    D F  V+   FDVIVSNPPYI    + 
Sbjct: 149 KGFTVDISANVVAVAKENAQNLQVDDRCEFFVGDLFEPVKDKVFDVIVSNPPYIPQKDIA 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L ++V+D++P  +L    DGLS Y+ +     ++L   G  +VEIG  Q   V ++   
Sbjct: 209 TLEIDVKDYEPLSALTDNKDGLSFYQRLFTQGMKYLKNGGFMAVEIGIYQAEPVKQMAID 268

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KDY G DRV+L  +
Sbjct: 269 NGWQNIEIIKDYAGIDRVVLAWK 291


>gi|28897518|ref|NP_797123.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364111|ref|ZP_05776831.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus K5030]
 gi|260879266|ref|ZP_05891621.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AN-5034]
 gi|260897558|ref|ZP_05906054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus Peru-466]
 gi|260903528|ref|ZP_05911923.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AQ4037]
 gi|28805730|dbj|BAC59007.1| HemK protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308086348|gb|EFO36043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus Peru-466]
 gi|308089666|gb|EFO39361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AN-5034]
 gi|308110852|gb|EFO48392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus AQ4037]
 gi|308114222|gb|EFO51762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus K5030]
          Length = 285

 Score =  308 bits (791), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 91/261 (34%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFNALLARRLAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPTTLIPRPDTERLVEVALDKTY-----GQTGSILDLGTGTGAIALALASELPNRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A E+A+ NA    +       Q  WF  +     F +IVSNPPY++      
Sbjct: 143 MGVDLKQEAKELAEYNAAQLNIK-NVTFDQGSWFEPIAEGTKFALIVSNPPYVDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMRGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281


>gi|291520819|emb|CBK79112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coprococcus catus GD/7]
          Length = 289

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 140/266 (52%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWR 58
            A  D+   L  + G+S    ++  +   D+ Q          I R  +   +  ++G  
Sbjct: 24  NASVDAWYLLEHIYGISRVDFLIRRNDPFDEAQMKQSADYQALIRRRSEGYPVQYLMGST 83

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  +   ++     PR +TE+LV++ALA   P        R+LD+ TG+G + L+L K 
Sbjct: 84  EFMGLPFFVNESVLIPRQDTEVLVETALAMMKPEC------RLLDMCTGSGCILLSLAKL 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +GVGVDIS  AL++A+ N    G+S +   + SD F SVEG+FD+IVSNPPYI + 
Sbjct: 138 GTVAEGVGVDISEGALKVAERNRENLGLS-QVKLVHSDLFGSVEGVFDMIVSNPPYIPTN 196

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  EV+D +P ++LDG  DGL  YR +A+   R+L   G    EIGY+Q   V ++
Sbjct: 197 DIEDLMREVKDHEPHLALDGSRDGLLFYRKLAEESGRYLVPGGSLLFEIGYDQGKAVSQL 256

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            +      ++  KD  G DRV+   +
Sbjct: 257 LDQAGFKDIHVKKDLAGLDRVVYAVK 282


>gi|158321601|ref|YP_001514108.1| HemK family modification methylase [Alkaliphilus oremlandii OhILAs]
 gi|158141800|gb|ABW20112.1| modification methylase, HemK family [Alkaliphilus oremlandii
           OhILAs]
          Length = 289

 Score =  308 bits (789), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 6/267 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V  +    + + P+  +   +       + +   H  +  I+  ++F  
Sbjct: 23  PRLDAEVLLYNVLKVDRLHLHMYPEKEISKEEEALFWTYMAQRKNHMPVQYIIKKQEFMG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LV+ A+     + E +  VRI+D+GTG+GA+ ++L K     
Sbjct: 83  LDFFVEEGVLIPRGDTEILVEKAIEIYKEKFEPQK-VRIMDIGTGSGAIVVSLAKFIENS 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
               +DIS KA E+AK NA  +GV  +        F ++ G      +D IVSNPPYI  
Sbjct: 142 ILTAIDISPKAFEVAKKNAAHHGVDHKIAFYLGSLFEALYGKDEHKEYDFIVSNPPYIPK 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +VD L   V+D++P ++LDGG DGL  YR I  G   +L   G    EIGY+Q   V  
Sbjct: 202 AVVDTLDAGVKDYEPHLALDGGADGLDFYREITLGAKEYLKSGGWLLFEIGYDQGESVSE 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +  L  V   KD  G DRV+L  +
Sbjct: 262 LLIANDLKEVQVRKDLAGLDRVVLGKK 288


>gi|220930733|ref|YP_002507642.1| modification methylase, HemK family [Clostridium cellulolyticum
           H10]
 gi|220001061|gb|ACL77662.1| modification methylase, HemK family [Clostridium cellulolyticum
           H10]
          Length = 285

 Score =  308 bits (789), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 5/266 (1%)

Query: 1   MQA-LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A + ++   LC+V       +    D  L   ++  L + +V+   +  +  I+G  +
Sbjct: 19  IEAPVHEAGVMLCKVLKCGRTYLYSHGDRELSIDEKAVLDHMLVQRTGNIPLQYIVGDTE 78

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++R  ++     PR +TELLV+  +   L + +     ++LD+ TG+G + +++    
Sbjct: 79  FMSLRFLVTPAVLIPRQDTELLVEKTID-LLNQGKTGTNKKVLDMCTGSGCIAVSIAYFC 137

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
           P    V  D+S KAL++AK+N+  NGV  R +    D F +++G   FD+IVSNPPYIE+
Sbjct: 138 PECSIVACDVSQKALDVAKANSELNGVQNRVELCCGDLFDAIKGGQKFDIIVSNPPYIET 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            I+  L  EVR ++P ++LDGG DGL  YR I       LN++G  + EIGYNQ   V  
Sbjct: 198 DIIAGLQKEVRSYEPGLALDGGADGLVFYRRIISSAPERLNRNGWLAFEIGYNQGEKVSA 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           + +      +  FKDYGGNDRV++  
Sbjct: 258 LMKES-FVDIQIFKDYGGNDRVVIGQ 282


>gi|328473484|gb|EGF44332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus 10329]
          Length = 285

 Score =  307 bits (788), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEPEQQAQFDALLARRLAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPTTLIPRPDTERLVEVALDKTY-----GQTGSILDLGTGTGAIALALASELPSRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A E+A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKELAEYNAAQLNIK-NVTFDQGSWFEPIAEGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGEAVREIMSGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVVTEKDYGGNDRVTLGC 281


>gi|163867490|ref|YP_001608689.1| methylase [Bartonella tribocorum CIP 105476]
 gi|161017136|emb|CAK00694.1| Methylase [Bartonella tribocorum CIP 105476]
          Length = 288

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/263 (39%), Positives = 147/263 (55%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++A  D+   +  +TG+++   I  PD  L       +  AI R +  E ++RI+G R+F
Sbjct: 23  LEADLDAKVLVEWITGINAATRISKPDMHLSSEHIRQIEQAIKRRIAGEPVYRIIGAREF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   LS +T EPRP+TE L+D  L F   +++       LD+GTG+GA+ +A+LK+ P
Sbjct: 83  YGISFALSQETLEPRPDTETLIDLVLPFLKKQVKNSKKTTFLDMGTGSGAIAIAILKQIP 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V VDIS  AL+ A  NA    V  RF  L SDWF SV   FD IVSNPPYI    +
Sbjct: 143 QSYAVAVDISEDALKTATKNAKNADVIHRFTPLLSDWFDSVTDRFDFIVSNPPYIPEKDI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR  DP  +L GG DGL  YR +A   + +L ++G  +VEIGY+Q+ +V  +F+
Sbjct: 203 NKLAKEVRLHDPLRALIGGKDGLDFYRKLAHEAANYLKENGTIAVEIGYSQEKEVCDLFK 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   KD  G  R LLF 
Sbjct: 263 KNGFQCLEMRKDLNGIPRALLFA 285


>gi|153814376|ref|ZP_01967044.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756]
 gi|317500090|ref|ZP_07958325.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087686|ref|ZP_08336612.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848772|gb|EDK25690.1| hypothetical protein RUMTOR_00586 [Ruminococcus torques ATCC 27756]
 gi|316898575|gb|EFV20611.1| hypothetical protein HMPREF1026_00267 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409667|gb|EGG89103.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 287

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++  D+   L  VT +S       P+  L + ++      I R  +   +  I G ++F 
Sbjct: 21  ESKIDAWYLLEYVTKISRAVFYAYPEKELTEEEKIQYEECIKRRAERIPLQHITGVQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP- 120
            +   ++     PR +TE+LV+ AL       + +++VRILDL TG+G + L++L     
Sbjct: 81  GLPFLVNEHVLIPRQDTEVLVEQALCLLEKEKKHKEIVRILDLCTGSGCILLSMLHYVRR 140

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                  GVG DIS +AL +A  NA   G+  +F  +Q D F +VEG FD+I+SNPPYI 
Sbjct: 141 KRKIDIYGVGSDISKEALAVAVENAKKLGIEAKF--VQGDLFENVEGSFDMILSNPPYIR 198

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  ++ L  EVR  DP  +LDG  DGL  YR I     ++L + G    EIG +Q   V 
Sbjct: 199 TSEIERLQEEVRFHDPIKALDGKEDGLYFYRIIVKESRQYLKRGGWLIFEIGSDQAEAVK 258

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            + +      +   KD  G DRV+
Sbjct: 259 TLLQEAGYENIEVKKDLAGLDRVV 282


>gi|154502574|ref|ZP_02039634.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149]
 gi|153796766|gb|EDN79186.1| hypothetical protein RUMGNA_00387 [Ruminococcus gnavus ATCC 29149]
          Length = 283

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 137/260 (52%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  VTG++     ++P+  + D++       I +      +  + G ++F  + 
Sbjct: 24  LDAWYLLEHVTGITKASYYMEPEHPMHDQEEREYLELIRKRSTRIPLQHLTGVQEFMGLE 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PR +TE+LV++AL       E+   +R+LD+ TG+G + L+LL E      
Sbjct: 84  FLVNEHVLIPRQDTEVLVETALDVCKQ--EQMGEIRLLDMCTGSGCILLSLLHELKPRTV 141

Query: 125 VGV--DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  D+S +AL +A+ NA    +    + L+SD F +V+G +DV+VSNPPYI + +++ 
Sbjct: 142 TGVGVDLSKEALCVAEKNAEKLKIDA--EFLESDLFENVKGTYDVVVSNPPYIRTSVIET 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV+D DP ++LDG  DGL  YR I +    +L K G    EIG +Q  DV  + E  
Sbjct: 200 LQEEVKDHDPYLALDGKEDGLYFYRRIIEQAPAYLKKKGWLLFEIGSDQGEDVKNLMEQA 259

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V+  KD  G DRV+  
Sbjct: 260 GYTGVSVKKDLAGLDRVVFG 279


>gi|91228928|ref|ZP_01262826.1| HemK protein [Vibrio alginolyticus 12G01]
 gi|91187511|gb|EAS73845.1| HemK protein [Vibrio alginolyticus 12G01]
          Length = 284

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEAEQKSQFDALLERRLTGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S  T  PRP+TE LV+ AL  +  +        +LDLGTGTGA+ +AL  E P  + 
Sbjct: 88  FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----VLDLGTGTGAIAIALASEMPKRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A  +A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281


>gi|116254018|ref|YP_769856.1| protein methyltransferase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258666|emb|CAK09770.1| putative protein methyltransferase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 286

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 118/263 (44%), Positives = 166/263 (63%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   +  +  LS  ++++     L   Q   +  A+ R L HE +HRILG R+F
Sbjct: 22  VDPATDARLLVAGLLKLSPTELLMRSAERLSPEQAKVIFKALERRLGHEPVHRILGEREF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + L LS++T EPRP+TE+LVD+ L +     + ++ + ILD+GTGTGA+CLALL E P
Sbjct: 82  YGLPLRLSAETLEPRPDTEILVDTVLVYLKDLAKVQNRLHILDMGTGTGAICLALLSECP 141

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              GVG DIS  AL  A+SNA  NG+ +RF+ +QS+WF  ++G F  IVSNPPYI S ++
Sbjct: 142 DASGVGSDISADALLTARSNAERNGLQDRFEAVQSNWFEDIQGSFHAIVSNPPYIASNVI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  FDP  +LDGG DGL  Y+ IA   +R +  DG+  +EIGY+Q+ DV  IFE
Sbjct: 202 HDLAPEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFE 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           ++    + + KDYG NDRVL+F 
Sbjct: 262 AKGFRCLKSVKDYGQNDRVLVFA 284


>gi|269965454|ref|ZP_06179573.1| HemK protein [Vibrio alginolyticus 40B]
 gi|269829933|gb|EEZ84163.1| HemK protein [Vibrio alginolyticus 40B]
          Length = 284

 Score =  305 bits (783), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFDALLERRLTGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ +AL  E P  + 
Sbjct: 88  FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIAIALASEMPKRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A  +A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGEAVREIMRGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281


>gi|254230551|ref|ZP_04923919.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio sp. Ex25]
 gi|262394971|ref|YP_003286825.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25]
 gi|151936923|gb|EDN55813.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio sp. Ex25]
 gi|262338565|gb|ACY52360.1| Polypeptide chain release factor methylase [Vibrio sp. Ex25]
          Length = 284

 Score =  305 bits (782), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAKFNALLERRLAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ +AL  E P  + 
Sbjct: 88  FKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIAIALASEMPTRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A  +A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKALAEYNAEQLNIK-NVTFAQGSWFEPITEGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVAKENGLADIRHISDLARQYLEVGGWLAFEHGYDQGDAVREIMRGF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYQQVATEKDYGGNDRVTLGC 281


>gi|240849862|ref|YP_002971250.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup]
 gi|240266985|gb|ACS50573.1| protoporphyrinogen oxidase protein [Bartonella grahamii as4aup]
          Length = 288

 Score =  305 bits (782), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 105/262 (40%), Positives = 150/262 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  +TG+++ + I  PD  L       +  A+ R +  E ++RI+G R+FY
Sbjct: 24  EADLDAKILVEWITGINAAERISKPDMHLSSEHIIQIEQALQRRIAGEPVYRIIGAREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  TLS +T EPRP+TE L+D  L F   ++E       LD+GTG+GA+ + LLK+ P 
Sbjct: 84  GISFTLSQETLEPRPDTETLIDLVLPFLQKQVENSGRTTFLDMGTGSGAIAITLLKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ AK NA    V+ RF  L SDWF +V   FD IVSNPPYI +  + 
Sbjct: 144 SYAVAVDISEDALKTAKKNAKNAEVAHRFTPLLSDWFDAVADRFDFIVSNPPYIPAQDIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR +DP  +L GG DGL  YR +A   + +L ++G  +VEIGY+Q+ +V  +F+ 
Sbjct: 204 KLAKEVRLYDPLRALMGGEDGLYFYRKLAHEAANYLKENGYVAVEIGYSQENEVCNLFKK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   KD  G  R LLF 
Sbjct: 264 NGFQCLEVRKDLSGIPRALLFA 285


>gi|86359339|ref|YP_471231.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CFN 42]
 gi|86283441|gb|ABC92504.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CFN 42]
          Length = 286

 Score =  305 bits (782), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 118/263 (44%), Positives = 162/263 (61%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +  + D+   +  +  LSS +++      L   Q   +  A+ R L HE +HRILG R+F
Sbjct: 22  VDPVTDARLLVAGLLKLSSTELLTRSAEKLSPEQIEVIFKAVERRLGHEPVHRILGEREF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + L LSS T EPRP+TE+LVD+ L +     + +  + ILD+GTG+GA+CLALL E P
Sbjct: 82  YGLPLGLSSGTLEPRPDTEILVDTVLPYLKDLAKAQRHLHILDIGTGSGAICLALLSECP 141

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G+G DIS  AL  AKSNA  NG+ +RF  +QS WF +++G F  IVSNPPYI S ++
Sbjct: 142 AASGIGSDISADALRTAKSNAERNGLQDRFQAVQSKWFENIQGSFHAIVSNPPYIASNVI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  FDP  +LDGG DGL  Y+ IA    R +  DG+  +EIGY+Q+ DV  IFE
Sbjct: 202 HDLAPEVTKFDPVAALDGGPDGLDAYKAIAKDAVRFMRPDGILGLEIGYDQRNDVTAIFE 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           ++    + + KDYG NDR L+F 
Sbjct: 262 AKGFRCLKSVKDYGQNDRALVFA 284


>gi|269961570|ref|ZP_06175932.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833611|gb|EEZ87708.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 285

 Score =  305 bits (781), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+      + R +  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPERALETEQQAQFDALLERRIAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPSTLIPRPDTERLVEVALDKTFGQTGP-----ILDLGTGTGAIALALASEMPNRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182
           +G+D+  +A E+A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGIDLKQEAKELAEHNASQLNIK-NVTFDQGSWFEPIASGTKFALIVSNPPYIDEKDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I    
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLQEGGWLAFEHGYDQGEAVREIMTHF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L C
Sbjct: 261 GFEQVVTEKDYGDNDRVTLGC 281


>gi|319408171|emb|CBI81824.1| Methylase [Bartonella schoenbuchensis R1]
          Length = 288

 Score =  304 bits (780), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 112/261 (42%), Positives = 149/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  VTG +    I+ P+  L  +Q   L  AI R +  E  HRI+G RDFY
Sbjct: 24  EANLDAKLLVEWVTGTTPTDRILQPNMRLSSKQIAQLKKAIQRRIAGEPTHRIIGKRDFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + LTLS DT EPRP+TE LVD  L     ++EK      LD+GTG+GA+ +A+LK+   
Sbjct: 84  GISLTLSQDTLEPRPDTETLVDLVLPILKKQVEKTGKATFLDMGTGSGAIAIAILKQIIQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              + VDIS  AL+ A  NA    +++RF  L SDWF+SV G FD+IVSNPPYI    V 
Sbjct: 144 TYAIAVDISEDALKTATKNAKHADIAQRFTPLLSDWFTSVTGQFDLIVSNPPYIPEKDVQ 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L GG DGL  YR +A   + HL +    +VEIGY+Q+ +V  +F+ 
Sbjct: 204 NLAKEVRLHDPLRALVGGKDGLDFYRKLAHESANHLKEKAYVAVEIGYSQQKEVCDLFKK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   KD  G  R LLF
Sbjct: 264 NGFEYLKMRKDLNGIPRALLF 284


>gi|241206501|ref|YP_002977597.1| modification methylase, HemK family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860391|gb|ACS58058.1| modification methylase, HemK family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 286

 Score =  304 bits (780), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 117/263 (44%), Positives = 163/263 (61%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   +  +  LS  +++      L   Q   +  A+ R L HE +HRILG R+F
Sbjct: 22  VDPATDARLLVAGLLKLSPTELLTRSAERLSAEQAEAIFRALERRLGHEPVHRILGEREF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + L LS++T EPRP+TE+LVD+ L +     + +  + ILD+GTGTGA+CLALL + P
Sbjct: 82  YGLPLRLSAETLEPRPDTEILVDTVLVYLKDLAKVQSRLHILDMGTGTGAICLALLSDCP 141

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              GVG DIS  AL  A+SNA  NG+ +RF  +QS WF +++G F  IVSNPPYI S ++
Sbjct: 142 DASGVGSDISADALLTARSNAERNGLQDRFQVVQSSWFENIQGSFHAIVSNPPYIASNVI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  FDP  +LDGG DGL  Y+ IA   +R +  DG+  +EIGY+Q+ DV  IFE
Sbjct: 202 HDLAPEVTKFDPAAALDGGPDGLDAYKAIAKDAARFIRPDGVVGLEIGYDQRNDVTAIFE 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           ++    + + KDYG NDRVL+F 
Sbjct: 262 AKGFRCLKSVKDYGQNDRVLVFA 284


>gi|332140930|ref|YP_004426668.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550952|gb|AEA97670.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 285

 Score =  304 bits (779), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 97/263 (36%), Positives = 138/263 (52%), Gaps = 7/263 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   PD  L   Q     +AI R    E +  I+G RDF+ + L
Sbjct: 23  DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRI----EKRDVVRILDLGTGTGAVCLALLKESPF 121
             SS T  PRP+TE+LV+  + ++   +      +  + I DLGTGTGA+ LAL  E P 
Sbjct: 83  FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGTGTGAIALALASELPQ 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
              +GVD    A+ +AK NA +N +      +QSDWFS++ G  FD+IVSNPPYI+    
Sbjct: 143 ASVIGVDFLSDAVALAKRNANSNKI-NNARFMQSDWFSALRGHTFDIIVSNPPYIDETSP 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L  G  GLS  + I    S +LN +GL + E G++Q   V  + +
Sbjct: 202 YLNEGDVR-FEPKSALTSGDSGLSDIKHIISHASTYLNSNGLLAFEHGFDQGDAVKALLQ 260

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +     V   KDYG NDRV L  
Sbjct: 261 TSGFVNVKTIKDYGNNDRVTLGQ 283


>gi|167855821|ref|ZP_02478573.1| HemK-like protein [Haemophilus parasuis 29755]
 gi|167853034|gb|EDS24296.1| HemK-like protein [Haemophilus parasuis 29755]
          Length = 416

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 145/264 (54%), Gaps = 4/264 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++ L++ +   L   + R  K E +  ILG ++F
Sbjct: 151 LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 210

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S+ T  PRP+TE LV+ AL ++  R++    ++ILDLGTGTGA+ LAL  E  
Sbjct: 211 WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 270

Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
              + +G+D    A+++A+ N    G  E    LQSDWF +++   FD+IVSNPPYI+  
Sbjct: 271 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 329

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I      +L  +G   +E G+ Q   V  I
Sbjct: 330 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 388

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
           F+  +   V  F+DYGGNDRV + 
Sbjct: 389 FQQNQWNAVTTFQDYGGNDRVTVA 412


>gi|210608517|ref|ZP_03287893.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787]
 gi|210153008|gb|EEA84014.1| hypothetical protein CLONEX_00072 [Clostridium nexile DSM 1787]
          Length = 287

 Score =  302 bits (774), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VTGL      + PD  + D Q       + +  +H  +  I G ++F  +  
Sbjct: 25  DAWYLLEFVTGLDRTAYFLKPDEKITDEQGSLYKAYLEQRAQHIPLQHITGVQEFMGLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE LV+  L++  P++      ++LD+ TG+G + ++L+K     +GV
Sbjct: 85  AVNEHVLVPRQDTETLVECVLSYVQPQM------KVLDMCTGSGCILISLMKLGKIAQGV 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DIS +AL+ AK NA  + V      ++SD F ++   +DVIVSNPPYI + +++ L  
Sbjct: 139 GADISDEALKTAKKNAEKHQVEPL--LIKSDLFENIVDKYDVIVSNPPYIRTAVIEELKE 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DP ++LDG  DGL  YR + +    +L K G+   EIG++Q  DV  + E     
Sbjct: 197 EVRCHDPILALDGKEDGLYFYRKLIEQSPMYLKKGGMLYFEIGHDQGQDVKCLMEKAGFE 256

Query: 246 LVNAFKDYGGNDRVLLF 262
            V   KD  G DRV+  
Sbjct: 257 DVMVKKDLAGLDRVVFG 273


>gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum
           ATCC 51196]
 gi|225794369|gb|ACO34459.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum
           ATCC 51196]
          Length = 294

 Score =  302 bits (773), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  V G +   +IV  D  +   Q     + I+R    E +  I+G ++F+ 
Sbjct: 36  ARRDAELLLQHVLGRNRAWLIVHSDDAMTAEQVTQFESWILRRAAQEPVQYIVGEQEFWG 95

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++ D   PRPETE LV++AL     R+ + + VR+ D+GTG+GA+ +AL    P  
Sbjct: 96  LRLRVTPDVLIPRPETEHLVEAALE----RLPEGETVRVADIGTGSGAIAIALAASRPQA 151

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
               +D+S  AL IA+ NA  +GV+ER   LQSD  ++V G  F +IVSNPPY+      
Sbjct: 152 LVTALDLSEAALRIARENAAAHGVAERMRFLQSDLLAAVRGERFAMIVSNPPYVPGGE-- 209

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VRDF+P  +L  G +GL  YR +    +  L   G   +EIG+ Q+  +  +   
Sbjct: 210 ELEPQVRDFEPHSALFAGAEGLDVYRRLIPEAAEVLEPGGWLLMEIGHGQRAALAELL-- 267

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +    D  G  RV++  +
Sbjct: 268 AGWDDIAFVDDLQGIPRVVMARK 290


>gi|319899229|ref|YP_004159322.1| Methylase [Bartonella clarridgeiae 73]
 gi|319403193|emb|CBI76752.1| Methylase [Bartonella clarridgeiae 73]
          Length = 288

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 103/261 (39%), Positives = 148/261 (56%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   +  +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EADLNAKILVEWITGTNASDRILRPNMCLSSKQLVQLEQAINRRIAGEPVYRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS DT EPRP+TE LVD  +      +EK +   +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GIPFALSKDTLEPRPDTETLVDLVVPILKTHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    + 
Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFAPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L GG DGL  YR +A     +L + G  +VEI Y+Q+  V  +FE 
Sbjct: 204 NLAKEVRQHDPLRALIGGKDGLDFYRKLAHESENYLKEKGHIAVEISYSQEKKVCDLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   +D  G  R LLF
Sbjct: 264 NGFKCLKIREDLNGIPRALLF 284


>gi|156973550|ref|YP_001444457.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116]
 gi|156525144|gb|ABU70230.1| hypothetical protein VIBHAR_01251 [Vibrio harveyi ATCC BAA-1116]
          Length = 285

 Score =  302 bits (773), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 135/261 (51%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+    + +VR +  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEAEQQAQFDDLLVRRIAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPSTLIPRPDTERLVEVALDKTYEQTGP-----ILDLGTGTGAIALALASEMPKRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           +GVD+  +A E+A+ NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKELAEYNASQLNIK-NVTFDQGSWFEPIVSGTKFALIVSNPPYIDEQDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q   V  I  + 
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQGDAVREIMTNF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V    DYGGN+RV L C
Sbjct: 261 GYEQVVTENDYGGNERVTLGC 281


>gi|331090677|ref|ZP_08339526.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400091|gb|EGG79742.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 274

 Score =  301 bits (772), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  +T +S      +P   +   Q+      +    K   +  +   ++F 
Sbjct: 21  DASIDAWILLEYITKISRAMYYANPKREMTGEQKTQYKYFVEERAKRIPLQHLTKEQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV++ L          + +R+LD+ TG+G + ++LLK    
Sbjct: 81  GLSFEVNEHVLIPRQDTEVLVETVLEDL------EENMRVLDICTGSGCILISLLKIMRG 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            KGVGVDIS +ALE+A+ NA  + +   F  +QSD F +VEG +DVIVSNPPYI++  ++
Sbjct: 135 VKGVGVDISEEALEVARRNAQKHDMEAVF--IQSDLFENVEGTYDVIVSNPPYIKTEEIE 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  DP ++LDG  DGL  YR I     ++L ++G    EIG  Q  +V  + E 
Sbjct: 193 KLEEEVKLHDPMLALDGKEDGLYFYRKIIKESRKYLKRNGKLYFEIGNTQGEEVKTLMEE 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD  G DRV+
Sbjct: 253 EGFTNVKIKKDLAGLDRVV 271


>gi|125974913|ref|YP_001038823.1| HemK family modification methylase [Clostridium thermocellum ATCC
           27405]
 gi|256003830|ref|ZP_05428817.1| modification methylase, HemK family [Clostridium thermocellum DSM
           2360]
 gi|281418621|ref|ZP_06249640.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum JW20]
 gi|125715138|gb|ABN53630.1| modification methylase, HemK family [Clostridium thermocellum ATCC
           27405]
 gi|255992168|gb|EEU02263.1| modification methylase, HemK family [Clostridium thermocellum DSM
           2360]
 gi|281407705|gb|EFB37964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum JW20]
 gi|316939124|gb|ADU73158.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium thermocellum DSM 1313]
          Length = 302

 Score =  301 bits (772), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 89/279 (31%), Positives = 140/279 (50%), Gaps = 20/279 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   LCRV  +    +    D  + + +    T  +   +K + +  I G ++F +
Sbjct: 22  PALEAGVLLCRVLNVDRSYLYSHDDYNMTEEEYKKFTLFLEERIKGKPLQYITGHQEFMS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ D   PR +TE LV++ L          +  RILD+GTG+G + ++L       
Sbjct: 82  LDFIVTPDVLIPRQDTETLVEAVLTHVKST--GLENARILDIGTGSGCIAVSLAHFLKDS 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----------------EGLF 165
           + + +DIS KALEIA++NA   GV +R   L+ D    +                 EG F
Sbjct: 140 RVLALDISEKALEIAETNAKRCGVWDRMFFLKGDALEGLAGIIAQSPFAKDFERKGEGFF 199

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI S  +  L  +V+D++PR +LDGGIDGL  YR I    ++ L+ D L + 
Sbjct: 200 DIIVSNPPYIPSEEIKTLHKQVKDYEPRTALDGGIDGLDFYRAITCEAAKLLSTDSLLAF 259

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           E+GYNQ  +V    +      +   KD  G DRV++ CR
Sbjct: 260 EVGYNQAENVSEFMKES-FSAIKVVKDLAGIDRVVMGCR 297


>gi|150388170|ref|YP_001318219.1| HemK family modification methylase [Alkaliphilus metalliredigens
           QYMF]
 gi|149948032|gb|ABR46560.1| modification methylase, HemK family [Alkaliphilus metalliredigens
           QYMF]
          Length = 293

 Score =  301 bits (771), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 6/266 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC +      Q+ + P+  +D+  +      I +  K   +  I+G ++F  
Sbjct: 23  PQLDAEVILCHLLKTERIQLHIYPERKVDEEVQEQFWEGIQKRKKRMPVQYIVGTQEFMG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   + S    PR +TE+LV+S L          + V ++D+GTG+GA+ ++L +     
Sbjct: 83  LDFRVESGVLIPRADTEILVESVLGLYEVHY-NNEAVALMDIGTGSGAIAISLARFIERS 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177
           K   +D+S KALEIA++N  TN V  +        F  +     EG F  ++SNPPYI  
Sbjct: 142 KIYAIDLSEKALEIAENNGRTNEVQHKISFFYGSLFEPLKGYDLEGTFQFVISNPPYIPP 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +V+ L  +V+D++PR++L+GG DGL  YR I +   ++L   G    EIGY+Q   V  
Sbjct: 202 DVVEELSPQVKDYEPRMALEGGADGLDFYREIVEKAPQYLQMKGWLCFEIGYDQGEQVKG 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           + E+R    V   +D  G DRV++  
Sbjct: 262 LMETRGFSRVEVIRDLAGLDRVVIGQ 287


>gi|163803584|ref|ZP_02197451.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4]
 gi|159172626|gb|EDP57483.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Vibrio sp. AND4]
          Length = 285

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 133/261 (50%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V G     ++  P+  L+  Q+    + + R +  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLGKPRTYLLTWPEKALEIEQQAQFDDLLARRIAGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +  +        ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPSTLIPRPDTERLVEIALDKTYAQTGP-----ILDLGTGTGAIALALASEMPKRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182
           +GVD+  +A ++A  NA    +       Q  WF  +     F +IVSNPPYI+      
Sbjct: 143 MGVDLKQEAKDLAHYNASQLNIK-NVTFAQGCWFEPITSGTKFALIVSNPPYIDEQDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  R I+D   ++L   G  + E GY+Q   V  I  + 
Sbjct: 202 SQGDVR-FEPKSALVADENGLADIRHISDLARQYLEAGGWLAFEHGYDQGDAVRTIMTNF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDRV L C
Sbjct: 261 GYEQVVTEKDYGGNDRVTLGC 281


>gi|239996063|ref|ZP_04716587.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii ATCC 27126]
          Length = 279

 Score =  301 bits (771), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   P+  LD  Q+      + +  + E +  I+G RDF+ + L
Sbjct: 23  DAKVMLANILGKSQTYLFTWPNKTLDAAQKAQFEADVAKRKRGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
             S DT  PRP+TE+LV+  L ++         + I DLGTGTGA+ LAL  E P     
Sbjct: 83  FTSPDTLIPRPDTEVLVEHVLNWANQHSSA--SLSICDLGTGTGAIALALASELPEASVT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
           GVD    A+ +A  NA  N ++     +QSDWFS++ G  FD+IVSNPPYIE        
Sbjct: 141 GVDFQAGAVNLATRNAQANSIA-NAHFVQSDWFSALAGQTFDIIVSNPPYIEESSPYLNE 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P+ +L  G DGL   + I +   ++LNK  L + E G++Q   V  +      
Sbjct: 200 GDVR-FEPKTALTSGSDGLDDIKQIINNAPQYLNKGALLAFEHGFDQGAAVNALLVDAGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   KDYG NDRV L  
Sbjct: 259 VEVKTVKDYGDNDRVTLGQ 277


>gi|331085531|ref|ZP_08334615.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330407418|gb|EGG86920.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 277

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG+S     +      +++      + I R  +   +  I G ++F 
Sbjct: 21  EAELDAWYLLEYVTGISRTMYYLKQAEPAEEQAAERYFDCISRRAQRIPLQHITGEQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+ AL+            ++LD+ TG+G + ++L      
Sbjct: 81  GLPFIVNEHVLIPRQDTEILVEEALSHL------SGNEQVLDMCTGSGCILISLEHYRKG 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VG DIS +AL++AK NA +         L+SD F  V   +D+IVSNPPYI +  ++
Sbjct: 135 IRAVGADISDEALQVAKRNAESLNAD--VTFLKSDLFEQVAERYDLIVSNPPYIRTKTIE 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP I+LDG  DGL  YR I +    HL + G    EIGY+Q  DV ++ E 
Sbjct: 193 ELEEEVRLHDPMIALDGKEDGLYFYRKITEKSREHLKQGGWLLFEIGYDQGEDVAKMMEK 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD  G DRV+
Sbjct: 253 AGFTEVTVKKDLAGLDRVV 271


>gi|319406094|emb|CBI79724.1| Methylase [Bartonella sp. AR 15-3]
          Length = 288

 Score =  300 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 149/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   +  VTG ++   I+ P+  L   Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EADLNAKILVEWVTGTTASDRILQPNMCLSSEQLVQLEQAINRRIAGEPVYRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  TLS DT EPRP+TE +VD  L      +EK +   +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GIPFTLSKDTLEPRPDTETVVDLVLPILKTYLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ A  NA    V+ RF  L S+WF SV+G FD+I+SNPPYI    + 
Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFTPLLSNWFDSVKGQFDLIISNPPYIPEKEIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L GG DGL  YR +A   + +L +    +VEIGY+Q+ +V  +F+ 
Sbjct: 204 NLAKEVRQHDPLRALIGGKDGLDFYRKLAHESANYLKEKSYIAVEIGYSQEKEVCDLFKK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   +D     R LLF
Sbjct: 264 NGFKCLKIREDLNRIPRALLF 284


>gi|291520550|emb|CBK75771.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Butyrivibrio fibrisolvens 16/4]
          Length = 276

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 7/260 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D+   L  V+G++  Q  +     + +   +     ++R   H  +  I G +DF
Sbjct: 20  LDAKIDAWLLLSFVSGITKAQYFLKQSEEIPENTLYKYKEVLLRRASHVPLQHITGEQDF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   ++     PR +TE LV+ AL              +LDL TG+G V ++L+    
Sbjct: 80  MGLTFWVNEHVLIPRQDTETLVEEALKVI------PSGSHVLDLCTGSGCVIISLVALGQ 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G+GVDIS  AL +A+ N     V ++    + D F+ V+G F+ IVSNPPYI + +V
Sbjct: 134 GLSGIGVDISEDALVVARENGTR-IVGKKVAFEKGDLFTGVQGRFNAIVSNPPYIPTAVV 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L +EV+D +PR++LDG  DGL  YR I      +LN+ G   VEIGY+Q  DV ++F 
Sbjct: 193 EGLAVEVKDHEPRLALDGTEDGLLFYRRITASAQDYLNEGGWLLVEIGYDQGQDVSKLFT 252

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 V   +D  GNDRV+
Sbjct: 253 DAGFKDVEVVQDLAGNDRVV 272


>gi|291547176|emb|CBL20284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus sp. SR1/5]
          Length = 295

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 88/272 (32%), Positives = 126/272 (46%), Gaps = 13/272 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L   TG +        D  + D         I R   H  + ++     F 
Sbjct: 22  EAGLDAWLLLEFKTGKNRAYYFAHGDEPVSDETAAEYLTLIDRRAGHIPVQQLTHQAFFM 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ +   PR +TE LV+ AL      +   +   ILD+ TG+G + L+LL E   
Sbjct: 82  GYEFYVNENVLIPRQDTETLVEEALK----HLGNVEKPEILDMCTGSGCILLSLLLERQD 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNP 172
             G GVD+S +ALE+AK NA    V  R D ++SD FS+           G +D+++SNP
Sbjct: 138 ACGTGVDVSPEALEVAKKNAGILKVENRADFVESDLFSAPYFCEKGGKDSGKYDILISNP 197

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +  ++ L  EVR  DPR +LDG  DGL  YR I     R+L   G    EIG  Q 
Sbjct: 198 PYIATEEIETLMEEVRLHDPRKALDGMEDGLYFYRKITAEAGRYLKPGGWLLYEIGCTQG 257

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             V  + ++     V   KD  G DRV+L  +
Sbjct: 258 EAVSTMMKAAGFTGVQIVKDLPGLDRVVLGQK 289


>gi|319407579|emb|CBI81229.1| Methylase [Bartonella sp. 1-1C]
          Length = 288

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 150/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   +  +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EADLNAKILVEWITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  TLS DT EPRP+TE LVD  L      +EK +   +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GIPFTLSKDTLEPRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    + 
Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFTPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L+GG DGL  YR +A   + +L +    +VEIGY+Q+  V  +FE 
Sbjct: 204 NLAKEVRQHDPWCALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   +D     R LLF
Sbjct: 264 NGFKCLKIREDLNRIPRALLF 284


>gi|300723055|ref|YP_003712353.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297629570|emb|CBJ90173.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus nematophila ATCC 19061]
          Length = 286

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 90/265 (33%), Positives = 138/265 (52%), Gaps = 10/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   ++++   +   L + + R ++ E I  I+G R+F++
Sbjct: 20  PKRDAEILLQYVTGCSRTYLIAFSETLISPEEAHQLDSMLARRIRGEPIAYIVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL      +      +ILDLGTGTGA+ LAL  E    
Sbjct: 80  LSLAVSPATLIPRPDTECLVEKALE-----LLPDSPAQILDLGTGTGAIALALASERHDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              GVDI+  A+ +AK NA  N         + LQS+WF+ V    FD+IVSNPPYI+  
Sbjct: 135 HVTGVDINPDAVALAKRNAERNTEKLPFHYVNFLQSEWFAEVGHRQFDMIVSNPPYIDEA 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  +VR F+P  +L    +G++  +TI +     L  +G   +E G+ Q   V  +
Sbjct: 195 DPHLREGDVR-FEPATALIAAQNGMADLQTIVEQARHFLLPNGWLLLEHGWKQGTVVRNL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F  +    +  F+DYGGN+R+ +  
Sbjct: 254 FLEKGYQRIATFQDYGGNERITVGR 278


>gi|260589192|ref|ZP_05855105.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM
           20583]
 gi|331082608|ref|ZP_08331731.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540273|gb|EEX20842.1| protein-(glutamine-N5) methyltransferase [Blautia hansenii DSM
           20583]
 gi|330400227|gb|EGG79869.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 285

 Score =  300 bits (769), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  V+G+S     V  D  + +         I +  KH  + ++     FY
Sbjct: 22  DANLDAWLLLEYVSGISRSWYFVHEDEEISENDIEEYQILIEQRGKHIPLQQLTKEAYFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  ++ +   PR +TE+LV+  L+ S    ++++ +++LD+ TG+G + LALL     
Sbjct: 82  GMKFFVNENVLIPRQDTEVLVEQVLSLS----KEKENLKLLDMCTGSGCILLALLANLKQ 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G GVD+S KALE+A+ N+   G+      +QSD F  V G +D+IVSNPPYIE+ +++
Sbjct: 138 ASGTGVDLSEKALEVAQRNSKELGIE--VSWVQSDLFDKVSGSYDIIVSNPPYIETSVIE 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+ ++PR++LDG  DGL  YR I     ++L  +G+ + EIGYNQ   V    + 
Sbjct: 196 GLMDEVKLYEPRMALDGTEDGLFFYREITMQAGKYLKNNGILAFEIGYNQGKAVSEFMKE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D  G DRV+   
Sbjct: 256 NGYKEVQVLQDLAGLDRVVTGR 277


>gi|78484733|ref|YP_390658.1| HemK family modification methylase [Thiomicrospira crunogena XCL-2]
 gi|78363019|gb|ABB40984.1| modification methylase, HemK family [Thiomicrospira crunogena
           XCL-2]
          Length = 279

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 6/262 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L  V   +   +   P+  L + +     +   R ++   I  ++G R+F+ +
Sbjct: 23  ALDAELLLSFVLQKNRTYLYTWPEKPLSEAEHTQYFDLTSRRVEGHPIAHLIGHREFWGM 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ DT  PRP+TE+LV++AL   +   +       LDLGTG+GA+  A+    P  +
Sbjct: 83  DFQVTPDTLIPRPDTEILVETALE--IMASKNNQAWSFLDLGTGSGAIACAIKASHPACE 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VD    AL +A+ NA  + ++      Q  WF  V+G  FD+IVSNPPYIE      
Sbjct: 141 ATAVDFQASALAVAQQNANQHHLT--IHFKQGSWFDPVKGQTFDLIVSNPPYIEEHDPHL 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L  G DGL   R I +    +L   G   +E GYNQ   V R+F+++
Sbjct: 199 KEGDVR-FEPLTALTSGEDGLDDIRFIIEHAPTYLKPKGWLLIEHGYNQHEAVQRLFKAQ 257

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V +  DYG N RV L  R
Sbjct: 258 GFTAVESRLDYGQNPRVTLGQR 279


>gi|77920282|ref|YP_358097.1| putative protoporphyrinogen oxidase [Pelobacter carbinolicus DSM
           2380]
 gi|77546365|gb|ABA89927.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter
           carbinolicus DSM 2380]
          Length = 287

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/261 (36%), Positives = 141/261 (54%), Gaps = 7/261 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            RD+   L    G+    + ++ D  L++ +       +V+  + E +  ILG  +F+++
Sbjct: 27  RRDAELLLGASLGMDRVGLYLNFDRPLEESELTAYRALVVKRARREPLQYILGETEFWSL 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L++S     PRP+TE+LV+ AL  +       +  R+LD+GTG+GA+ +AL  E    +
Sbjct: 87  PLSVSPAVLIPRPDTEVLVEEALRVA-------NGSRVLDVGTGSGAIAIALAHELADAQ 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V +DI  +AL +A  NA  NGV +R   L+ D     EG FD+IVSNPPYI +  +D L
Sbjct: 140 VVALDICPQALAVAADNARRNGVDDRVRFLERDLAQLPEGPFDLIVSNPPYIPAADLDGL 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRDF+PR +L+GG DGL  YR +A      L   G   VE+G +Q   V ++F+   
Sbjct: 200 MPEVRDFEPRQALNGGQDGLDPYRLLAAQADTCLVPGGWLLVEVGIDQAAAVRQLFDDAG 259

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
           L       DYGG  RV+   R
Sbjct: 260 LVDGFVRDDYGGVPRVVGARR 280


>gi|330863232|emb|CBX73358.1| protein methyltransferase hemK [Yersinia enterocolitica W22703]
          Length = 279

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 95/261 (36%), Positives = 134/261 (51%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   +S L   Q   L     R  + E I  ++G R+F++
Sbjct: 15  PKRDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 74

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P F
Sbjct: 75  LPLSVSSATLIPRPDTECLVEQALAHL-----PATPCRILDLGTGTGAIALALASERPDF 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +GVDI   A+ +A+ NA    +    D LQS WF SV G F +IVSNPPYI++     
Sbjct: 130 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  + 
Sbjct: 189 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNS 247

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  +KDYG NDRV L  
Sbjct: 248 GFSAVMTYKDYGNNDRVTLGQ 268


>gi|253990003|ref|YP_003041359.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253781453|emb|CAQ84616.1| protein methyltranferase hemk (protein-glutamine n
           methyltransferase) [Photorhabdus asymbiotica]
          Length = 283

 Score =  299 bits (767), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT  S   ++   ++ +   Q   L   + R  K E I  I G R+F++
Sbjct: 21  PKRDAEILLGFVTRHSRTYILAFGETQISPEQFSQLETLLARRAKGEPIAYITGEREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LA+  E    
Sbjct: 81  LSLTVSPATLIPRPDTECLVEKALECL-----SLTPCRILDLGTGTGAIALAIASERSDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +  GVDI+  A+ +A+ NA    +    D L S+WFSS+    FD+IVSNPPYI+     
Sbjct: 136 QVTGVDINPDAVMLAQGNAEKLKIQ-NVDFLNSNWFSSLNNQQFDMIVSNPPYIDEADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +  +TI D     L  DG   +E G+ Q   V  +F  
Sbjct: 195 LFQGDVR-FEPDSALIAAEQGTADLKTIIDLSRNFLLPDGWLLLEHGWKQGDVVRSLFSE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V  F+DYGGN+R+ L  
Sbjct: 254 SGYQQVATFQDYGGNERITLGQ 275


>gi|226329847|ref|ZP_03805365.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198]
 gi|225200642|gb|EEG82996.1| hypothetical protein PROPEN_03759 [Proteus penneri ATCC 35198]
          Length = 282

 Score =  299 bits (767), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT  +   ++   +++L   +   L+  + R +K E I  ++G R+F++
Sbjct: 20  PKRDAEILLGHVTQRARTYLMAFNETLLSQDELTQLSQLLTRRIKGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL          + + ILDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLKVSPATLIPRPDTECLVEQALEKL-----PTEPITILDLGTGTGAIALAMASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
             +GVD   +A+ +A+ NA    ++   + ++S WFSS+ G  F +I+SNPPYI+     
Sbjct: 135 HIIGVDFQAEAVALAQENATRLALNNT-EFMESCWFSSLSGYQFGMIISNPPYIDENDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G +G +    I +   + L   G   +E G+ Q   V +IF  
Sbjct: 194 IHQGDVR-FEPLTALVAGNNGFADIEIIIETARQFLTDKGWVLLEHGWQQGEGVRKIFTD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V  F+DYGGN+RV +  
Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274


>gi|153854178|ref|ZP_01995486.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814]
 gi|149753227|gb|EDM63158.1| hypothetical protein DORLON_01477 [Dorea longicatena DSM 13814]
          Length = 287

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 137/266 (51%), Gaps = 12/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L   TG+S    + DPD  +++ +       I    +   +  I G ++F 
Sbjct: 26  EAKLDAWYLLEYKTGISRAVFLADPDREVEEEKAESYQKDICTRARRIPLQHITGEQEFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---- 117
            +   ++ +   PR +TE+LV+ AL    P ++      ILD+ TG+G +  ++LK    
Sbjct: 86  GLNFKVNENVLVPRQDTEILVEEALKRIRPDMQ------ILDMCTGSGCILESILKFGEK 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +    KG G DIS +AL++A+ N    G   RF  ++SD F SV   +D+IVSNPPYI +
Sbjct: 140 KQMHLKGTGCDISEEALKVARENNSRLGTDARF--IKSDLFESVTEKYDMIVSNPPYIRT 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV+  DP I+LDG  DGL  YR I     R+LNK G    EIG++Q  DV  
Sbjct: 198 EEISRLDEEVKLHDPWIALDGKEDGLYFYRLIVKDSIRYLNKGGYILFEIGFDQGKDVSE 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           + ++     +   KD  G DRV++  
Sbjct: 258 LLKNEGYEEIEIKKDLAGLDRVVMGR 283


>gi|126701108|ref|YP_001090005.1| protein methyltransferase [Clostridium difficile 630]
 gi|254977109|ref|ZP_05273581.1| protein methyltransferase [Clostridium difficile QCD-66c26]
 gi|255102694|ref|ZP_05331671.1| protein methyltransferase [Clostridium difficile QCD-63q42]
 gi|255308515|ref|ZP_05352686.1| protein methyltransferase [Clostridium difficile ATCC 43255]
 gi|255316189|ref|ZP_05357772.1| protein methyltransferase [Clostridium difficile QCD-76w55]
 gi|255518850|ref|ZP_05386526.1| protein methyltransferase [Clostridium difficile QCD-97b34]
 gi|255652029|ref|ZP_05398931.1| protein methyltransferase [Clostridium difficile QCD-37x79]
 gi|260685004|ref|YP_003216289.1| protein methyltransferase [Clostridium difficile CD196]
 gi|260688662|ref|YP_003219796.1| protein methyltransferase [Clostridium difficile R20291]
 gi|306521771|ref|ZP_07408118.1| protein methyltransferase [Clostridium difficile QCD-32g58]
 gi|115252545|emb|CAJ70388.1| Modification methylase HemK [Clostridium difficile]
 gi|260211167|emb|CBA66623.1| protein methyltransferase [Clostridium difficile CD196]
 gi|260214679|emb|CBE07316.1| protein methyltransferase [Clostridium difficile R20291]
          Length = 282

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  
Sbjct: 21  PRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRP+TE LV+  +        ++  V ILD+GTG+GA+ ++L K     
Sbjct: 81  LDFFVKEGVLIPRPDTETLVEEIIEICR----EKKDVSILDIGTGSGAITISLAKYIENS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
           K +  DIS  ALEIAK NA+ N V E+   + SD F+++      FD+IVSNPPYI+   
Sbjct: 137 KIMSFDISETALEIAKKNAIINEVGEKIKYINSDLFTAISDSNIKFDIIVSNPPYIKKQD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V+D++P  +L+GG DGL  YR I +   ++LNK G+ + E+G+NQ  DV+ I 
Sbjct: 197 IETLHKQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKCGILAYEVGHNQAEDVINIM 256

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           +S     +   KD  G DRV++ 
Sbjct: 257 KSNGYKKIYTKKDIQGIDRVVIG 279


>gi|319404589|emb|CBI78195.1| Methylase [Bartonella rochalimae ATCC BAA-1498]
          Length = 288

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 150/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   +  +TG ++   I+ P+  L  +Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EADLNAKILVEWITGTTASDRILQPNMYLSSQQLVQLEQAINRRIAGEPVYRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  TLS DT EPRP+TE LVD  L      +EK +   +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GIPFTLSKDTLEPRPDTETLVDLVLPILKSHLEKSEQATLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ A  NA    V+ RF  L S+WF S++G FD+I+SNPPYI    + 
Sbjct: 144 TYAVAVDISEDALKTATKNAQHANVAHRFIPLLSNWFDSIKGQFDLIISNPPYIPEKEIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L+GG DGL  YR +A   + +L +    +VEIGY+Q+  V  +FE 
Sbjct: 204 NLAKEVRQHDPWRALNGGEDGLYFYRKLAYESANYLKEKSYIAVEIGYSQEKKVRDLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   +D     R LLF
Sbjct: 264 NGFKCLKIREDLNKIPRALLF 284


>gi|190893590|ref|YP_001980132.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CIAT 652]
 gi|190698869|gb|ACE92954.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CIAT 652]
          Length = 286

 Score =  299 bits (766), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 116/262 (44%), Positives = 160/262 (61%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +  +   SS +++      L   Q   ++ A+ R L HE +HRILG R+FY
Sbjct: 23  DPATDARLLVAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS++T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P 
Sbjct: 83  GLPLQLSAETLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPE 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G DIS  AL  A+SNA  +G+ +RF  +QS WF ++ G F  IVSNPPYI S ++ 
Sbjct: 143 ASGIGSDISADALGTARSNAERHGLQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIH 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  FDP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE+
Sbjct: 203 DLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEA 262

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    + + KDYG NDR L+F 
Sbjct: 263 KGFRCLKSVKDYGQNDRALMFA 284


>gi|323142097|ref|ZP_08076945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413484|gb|EFY04355.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Phascolarctobacterium sp. YIT 12067]
          Length = 307

 Score =  298 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 100/263 (38%), Positives = 140/263 (53%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   LC V      ++  + D  L + +R  + + + R  KHE +  I+G R F 
Sbjct: 26  NPRLDAEVLLCAVLKCERIKLYTEFDKPLSEEERDKMRSYVERRAKHEPLAYIIGERAFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++  T  PRPETELLV+S L  + P +     V+ LD+GTG+GA+ ++LL   P 
Sbjct: 86  RNNFKVTPATLVPRPETELLVES-LVKAAPMLRADGAVKALDIGTGSGAIIVSLLDYLPA 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVI 179
             GVGVDIS +AL +AK NA   GV +R    QSD FS   VE  FD+IVSNPPYI +  
Sbjct: 145 AVGVGVDISNEALAVAKENAAAIGVDKRVAFRQSDLFSNVPVEKKFDIIVSNPPYIPAAD 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +V+  +PR +LDGG DGL  YR I    + HL +DGL + EIG +Q   V ++ 
Sbjct: 205 IATLAQDVQQ-EPRTALDGGADGLDFYRRICAEAAEHLAEDGLLAFEIGIDQSEAVQKLC 263

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                       DY G  R++  
Sbjct: 264 LEHGFAKTAVRMDYAGIPRMIFA 286


>gi|291524541|emb|CBK90128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium rectale DSM 17629]
          Length = 283

 Score =  298 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D+   L     ++     V  D  +   Q       + +  +   +  I+G ++F
Sbjct: 20  VDAKNDAWLLLAMACRINHTYYYVHMDEEMSQEQIREYQALLSKRAERIPLQYIVGEQEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  ++S+   PR +TE LV+ AL    P       +R+LD+ TG+G + +++LK + 
Sbjct: 80  MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G   DIS +AL +AK NA  NGV    D  +SD F  V+ ++DVIVSNPPYI S  +
Sbjct: 134 NVDGAACDISKQALNVAKENARLNGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +Q   V  + +
Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCDQGRQVSEMMQ 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 V+  KD  GNDRV+
Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271


>gi|49475008|ref|YP_033049.1| protoporphyrinogen oxidase protein [Bartonella henselae str.
           Houston-1]
 gi|49237813|emb|CAF27008.1| Protoporphyrinogen oxidase protein [Bartonella henselae str.
           Houston-1]
          Length = 288

 Score =  298 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 105/261 (40%), Positives = 146/261 (55%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  +T  +    ++ PD  L   Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EANLDAKILVEWITDTNISDRVLQPDLCLSFEQILQLEKAIQRRIAGEPVYRIIGKREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS +T EPR +TE LVD  L       EK + + +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GISFALSQETLEPRSDTETLVDLVLPPLKKYGEKSEKITLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  AL+ A  NA +  V  RF  L SDWF SV G FD+I+SNPPYI    + 
Sbjct: 144 SYAVAVDISENALKTATKNAKSAKVINRFTPLLSDWFDSVTGQFDLIISNPPYIPETDIT 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP  +L GG DGL  YR ++D  + +L + G  +VEIGY+Q+ +V  +FE 
Sbjct: 204 KLAKEVHLHDPLRALIGGKDGLDFYRKLSDKAANYLKEKGSIAVEIGYSQEKEVCDLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   KD  G  R LLF
Sbjct: 264 NGFKCLEMRKDLNGIPRALLF 284


>gi|291527967|emb|CBK93553.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium rectale M104/1]
          Length = 283

 Score =  298 bits (765), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D+   L     +      V  D  +   Q       + +  +   +  I+G ++F
Sbjct: 20  VDAKNDAWLLLAMACRIDHTYYYVHMDEEMSQEQIREYQALLSKRAERIPLQYIVGEQEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  ++S+   PR +TE LV+ AL    P       +R+LD+ TG+G + +++LK + 
Sbjct: 80  MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G   DIS +AL +AK NA  NGV    D  +SD F  V+ ++DVIVSNPPYI S  +
Sbjct: 134 NVDGAACDISKQALNVAKENARLNGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +Q   V ++ +
Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPHGRLLFEIGCDQGRQVSQMMQ 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 V+  KD  GNDRV+
Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271


>gi|332161452|ref|YP_004298029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|318605429|emb|CBY26927.1| methylase of polypeptide chain release factors [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665682|gb|ADZ42326.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
          Length = 284

 Score =  298 bits (764), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 95/261 (36%), Positives = 134/261 (51%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   +S L   Q   L     R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLSFVTGRARTYLLAFGESQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P F
Sbjct: 80  LPLSVSSATLIPRPDTECLVEQALAHL-----PATPCRILDLGTGTGAIALALASERPDF 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +GVDI   A+ +A+ NA    +    D LQS WF SV G F +IVSNPPYI++     
Sbjct: 135 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  + 
Sbjct: 194 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLILEHGWQQATAVQKLLNNS 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  +KDYG NDRV L  
Sbjct: 253 GFSAVMTYKDYGNNDRVTLGQ 273


>gi|14517939|gb|AAK64442.1|AF377339_3 protoporphyrinogen oxidase HemK [Myxococcus xanthus]
          Length = 293

 Score =  298 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  LS  ++ VD D  L   +       I R +  E    + G R+FYN    
Sbjct: 31  AEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFK 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETELLV++AL      + K    R LDL TG+G + ++L  E P    + 
Sbjct: 91  VDARVLIPRPETELLVEAALRM----LPKDAPGRALDLCTGSGCIAISLAAERPQATVIA 146

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
            D+S  A  +A+ NA   GV++R   LQ D F+ V     F V+VSNPPYI S  +  L 
Sbjct: 147 TDLSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLS 206

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +P ++LDGG DGL   R +  G  + L   GL ++EIG +Q   V+ +  +   
Sbjct: 207 AEVRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGY 265

Query: 245 FLVNAFKDYGGNDRVLLFC 263
                 KD    +R+    
Sbjct: 266 ADARVEKDLERRERMAFGT 284


>gi|123442666|ref|YP_001006643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122089627|emb|CAL12477.1| putative protoporphyrinogen oxidase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 284

 Score =  298 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q   L     R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLSFVTGRARSYLLAFGETQLTAEQLAVLEPLAARREQGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLSVSSATLIPRPDTECLVEQALAHL-----PVTPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +GVDI   A+ +A+ NA    +    D LQS WF SV G F +IVSNPPYI++     
Sbjct: 135 AVMGVDIKADAVALARHNAKKLAI-NNVDFLQSSWFDSVSGRFTLIVSNPPYIDANDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V ++  + 
Sbjct: 194 NEGDVR-YEPHSALVAEAEGIADLAEIIRQSPAYLEVGGWLMLEHGWQQATAVQKLLNNS 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  +KDYG NDRV L  
Sbjct: 253 GFSAVMTYKDYGNNDRVTLAQ 273


>gi|157826325|ref|YP_001494045.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia akari str. Hartford]
 gi|157800283|gb|ABV75537.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia akari str. Hartford]
          Length = 522

 Score =  298 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 88/278 (31%), Positives = 135/278 (48%), Gaps = 19/278 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L  V       ++++ D  L + +       + R LKHE I  I G ++FY
Sbjct: 23  PPQLEARILLQHVIHKPIEYLLINLDEQLSEAEIKAFEKLLERRLKHEPITYITGVKEFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAF------------------SLPRIEKRDVVRILD 103
           +    ++     PR +TE+LVD  L                     L  +       IL+
Sbjct: 83  SREFIVNKHVLIPRSDTEILVDVVLQRYSHSTQGHSTESGKPETKKLDSVVNPRNDSILE 142

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162
           LGTG+G V ++LL E P    +  DIS +A+E+AKSNA+ + V++R   + SDWF ++ +
Sbjct: 143 LGTGSGCVAISLLCELPNANIIATDISIEAIEVAKSNAIKHHVTDRIQIIHSDWFENLGK 202

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FDVIVSNPPYI       + LE  + +P  +L    DGL  YR IA      L  +G 
Sbjct: 203 QKFDVIVSNPPYISHSEKSEMALETLNHEPHFALFAEEDGLQAYRIIAKNAKPFLKPNGK 262

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +EIG+NQ   V +IF +    + N +KD   ++RV+
Sbjct: 263 IILEIGFNQAEKVSKIFLNYGYNIDNIYKDLQSHNRVI 300


>gi|166032747|ref|ZP_02235576.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC
           27755]
 gi|166027104|gb|EDR45861.1| hypothetical protein DORFOR_02462 [Dorea formicigenerans ATCC
           27755]
          Length = 299

 Score =  298 bits (764), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 87/265 (32%), Positives = 129/265 (48%), Gaps = 14/265 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  VTG+S      +P+  + + +       + +  +   +  I G ++F 
Sbjct: 26  DAQIDAWYLLEYVTGISRASYYGNPEKNISEEEAKRYWEYLEKRARRIPLQHITGSQEFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PR +TE LV+ AL    P +       +LD+ TG+G + ++LLK +  
Sbjct: 86  GYEFLVNEHVLIPRQDTENLVEEALKVIRPDM------HVLDMCTGSGCILISLLKYAAE 139

Query: 122 FK------GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K       VG DIS  ALE+AK NA    V      +QSD F +V   FD+IVSNPPYI
Sbjct: 140 RKHITGGKAVGADISADALEVAKKNAQRLKVP--VIWVQSDIFENVSESFDLIVSNPPYI 197

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            + ++  L  EV+  DP I+LDG  DGL  YR I      HLN       EIG++Q  DV
Sbjct: 198 RTEVIQGLEDEVKLHDPWIALDGHEDGLYFYRRIVSESISHLNDGAWLMFEIGHDQAEDV 257

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260
            ++ ++     +   KD  G DRV+
Sbjct: 258 SKLMKNAGFCNIYVKKDLAGLDRVV 282


>gi|39998193|ref|NP_954144.1| HemK family modification methylase [Geobacter sulfurreducens PCA]
 gi|39985139|gb|AAR36494.1| modification methylase, HemK family [Geobacter sulfurreducens PCA]
 gi|298507131|gb|ADI85854.1| peptide chain release factor methyltransferase [Geobacter
           sulfurreducens KN400]
          Length = 284

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L    GL    + V+ D  L+  +       + R  K E +  ILG ++F 
Sbjct: 28  NARLETEWLLSAALGLDRVGLYVNFDKPLNPEELAACRGLVARRAKREPLQYILGTQEFC 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE++V+ AL  +           +LD+G G+G + +AL K+ P 
Sbjct: 88  GLDFVVTPSVLIPRHDTEVIVEEALRRA------PHAAAVLDIGVGSGCIAVALAKQLPH 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            + VGV+ S  A+ +A+ NA  +G   R    +   F  + +  FD+IVSNPPYI +  +
Sbjct: 142 AQVVGVEQSPGAIALAQRNAERHGA--RVTLFEGSLFEPLGDQRFDLIVSNPPYIPTADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR+++PR +LDGG DGL  YR I      +LN  G   VE+G  Q   V+ +F 
Sbjct: 200 EALQPEVREYEPRAALDGGSDGLDFYRLIVPAAPEYLNPGGWLMVELGIGQAETVLGMFS 259

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                     +D  G DRV+
Sbjct: 260 RTGFCDCFTAQDPNGIDRVV 279


>gi|327193409|gb|EGE60309.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli CNPAF512]
          Length = 279

 Score =  298 bits (763), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 116/262 (44%), Positives = 160/262 (61%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +  +   SS +++      L   Q   ++ A+ R L HE +HRILG R+FY
Sbjct: 16  DPATDARLLVAGLLKQSSTELLTRSAEKLSPDQIAMISKALERRLGHEPVHRILGEREFY 75

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS++T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P 
Sbjct: 76  GLPLQLSAETLEPRPDTEILVDTVLAYLKDLAKAHGDLHILDIGTGTGAICLALLSECPE 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G DIS  AL  A+SNA  +G+ +RF  +QS WF ++ G F  IVSNPPYI S ++ 
Sbjct: 136 ASGIGSDISADALGTARSNAERHGLQDRFQAVQSSWFENIRGSFHAIVSNPPYIASNVIH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  FDP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE+
Sbjct: 196 DLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEA 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    + + KDYG NDR L+F 
Sbjct: 256 KGFRCLKSVKDYGQNDRALMFA 277


>gi|238923859|ref|YP_002937375.1| putative rRNA or tRNA methylase [Eubacterium rectale ATCC 33656]
 gi|238875534|gb|ACR75241.1| predicted rRNA or tRNA methylase [Eubacterium rectale ATCC 33656]
          Length = 283

 Score =  298 bits (763), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D+   L     ++     V  D  +   Q       + +  +   +  I+G ++F
Sbjct: 20  VDAKNDAWLLLAMACRINHTYYYVHMDEEMSQEQIGEYQALLSKRAERIPLQYIVGEQEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  ++S+   PR +TE LV+ AL    P       +R+LD+ TG+G + +++LK + 
Sbjct: 80  MGLKFRVNSNVLIPRQDTETLVEEALKVIEP------GMRVLDMCTGSGCIIISILKNTT 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              G   DIS +AL +AK NA  NGV    D  +SD F  V+ ++DVIVSNPPYI S  +
Sbjct: 134 NVDGAACDISKQALNVAKENARINGVF--VDFERSDLFEHVDEMYDVIVSNPPYIRSDEI 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  F+P  +LDG  DGL  YR I      +L   G    EIG +Q   V  + +
Sbjct: 192 PHLMPEVSVFEPHEALDGSEDGLLFYRRIIKDCRANLKPQGRLLFEIGCDQGRQVSEMMQ 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 V+  KD  GNDRV+
Sbjct: 252 FAGFSDVHVIKDLAGNDRVV 271


>gi|108759552|ref|YP_633065.1| putative protein methyltransferase HemK [Myxococcus xanthus DK
           1622]
 gi|108463432|gb|ABF88617.1| putative protein methyltransferase HemK [Myxococcus xanthus DK
           1622]
          Length = 293

 Score =  297 bits (762), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  LS  ++ VD D  L   +       I R +  E    + G R+FYN    
Sbjct: 31  AEILLSHVLKLSRVRLYVDLDRPLSKDELGAYRALIERRMAGEPTQYLTGVREFYNRPFK 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETELLV++AL      + K    R LD+ TG+G + ++L  E P    + 
Sbjct: 91  VDARVLIPRPETELLVEAALRM----LPKDAPGRALDVCTGSGCIAISLAAERPQATVIA 146

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
            D+S  A  +A+ NA   GV++R   LQ D F+ V     F V+VSNPPYI S  +  L 
Sbjct: 147 TDLSPDACALARENAQALGVADRVTVLQGDLFTPVPAGERFQVVVSNPPYIASGEIPGLS 206

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +P ++LDGG DGL   R +  G  + L   GL ++EIG +Q   V+ +  +   
Sbjct: 207 AEVRR-EPTLALDGGPDGLVAVRRVVTGARQWLEPGGLLALEIGEDQGPAVLELLRAAGY 265

Query: 245 FLVNAFKDYGGNDRVLLFC 263
                 KD    +R+    
Sbjct: 266 ADARVEKDLERRERMAFGT 284


>gi|325578169|ref|ZP_08148304.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159905|gb|EGC72034.1| protein methyltransferase HemK [Haemophilus parainfluenzae ATCC
           33392]
          Length = 292

 Score =  297 bits (762), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 101/266 (37%), Positives = 149/266 (56%), Gaps = 12/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   ++ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E      
Sbjct: 86  NVSEGTLIPRPDTEILVEKALHIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+  + +++A+SNA  N +  +   LQS WF +VEG FD+IVSNPPYI+
Sbjct: 146 KKHIQLDVIGVDLMPEVVKLAQSNAEKNQL--KVQFLQSRWFENVEGQFDIIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+PR +L  G +GL+  R + +    HL  +G   +E G+ Q  +V 
Sbjct: 204 EADEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLKDNGYLLLEHGWKQGEEVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
            IF       V   +DYG N+RV L 
Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTLG 288


>gi|168704925|ref|ZP_02737202.1| modification methylase, HemK family protein [Gemmata obscuriglobus
           UQM 2246]
          Length = 291

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 125/265 (47%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  V       + +  D    D +R      I R L    +  ++G R FY 
Sbjct: 30  AKLEAELLLAHVLQTDRTYLTMRFDEEPTDAERAKYKELITRRLAGWPVAYLVGSRGFYL 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE LV  AL     R++      +LD+GTG+G + ++L  +    
Sbjct: 90  LNFDVDPAVLIPRSDTETLVGEALK----RLKPLTAPAVLDIGTGSGCIAVSLAHQKKDS 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
                D+S  AL +AK NA+ N V++R   LQ D F+ +     FD++VSNPPYI     
Sbjct: 146 HVTATDVSPDALAVAKRNAIKNNVADRMTFLQGDLFAPLPAGVTFDLVVSNPPYIAQSEF 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +VRD +PR++LDGG DGL+ YR IA  V   L   G   +EIG+ Q   V  +  
Sbjct: 206 AELAPDVRDHEPRVALDGGPDGLAFYRRIAAAVGPFLKPGGSLLLEIGWKQDAAVRALIA 265

Query: 241 SRKLFLVN-AFKDYGGNDRVLLFCR 264
            +    +    KD G N RV+   +
Sbjct: 266 EQPELELGPTIKDMGKNPRVVTAKK 290


>gi|118581410|ref|YP_902660.1| HemK family modification methylase [Pelobacter propionicus DSM
           2379]
 gi|118504120|gb|ABL00603.1| [protein release factor]-glutamine N5-methyltransferase [Pelobacter
           propionicus DSM 2379]
          Length = 288

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/265 (34%), Positives = 133/265 (50%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   LC  TGL    + ++ D  L+  +       + R  + E +  ILG ++F 
Sbjct: 27  NARLEAEWLLCAATGLDRVGLYLNYDKPLNREELSAFRQMVARRARREPLQHILGSQEFC 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S D   PR +TE LV+ AL  +           +LD+GTG+G + ++L +  P 
Sbjct: 87  GLEFAVSPDVLIPRHDTETLVEEALRRA------PLARTVLDIGTGSGCIAVSLARRLPG 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            + V  DIS  ALE+A++NA  NGV    + L       V G  FD+IVSNPPYI S  +
Sbjct: 141 ARIVASDISAVALEMARANARANGVD--VEFLHGSLLEPVAGRCFDLIVSNPPYIPSADI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD DPR++LDGG DGL  YR +      HL   G   +E+G  Q  DV  +F 
Sbjct: 199 QLLEPEVRDGDPRLALDGGPDGLDIYRRLIPASLEHLEPGGWLLLEVGMGQAQDVAEMFP 258

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFCR 264
            +     V +  D GG +RV+   R
Sbjct: 259 LADGYGQVVSSPDPGGIERVVGAAR 283


>gi|67459736|ref|YP_247360.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia felis URRWXCal2]
 gi|75535874|sp|Q4UJU4|HEMK_RICFE RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|67005269|gb|AAY62195.1| Methylase of polypeptide chain release factors, tRNA
           (guanine-N(7)-)-methyltransferase [Rickettsia felis
           URRWXCal2]
          Length = 527

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 91/284 (32%), Positives = 147/284 (51%), Gaps = 24/284 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  ++   L  V       ++++ D  L++ +       + R LKHE I  I+G ++FY+
Sbjct: 24  SQLEARILLRYVINKPIEYLLINLDEQLNEVEIEAFEKLLERRLKHEPIAYIIGIKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----------------------- 99
               ++     PR +TE+LVD  +  S  R  KR V                        
Sbjct: 84  REFIVNKHVLIPRADTEVLVDVCVHKSSLRATKRSVAISGILSKIASSTPMASSRNDEYT 143

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +IL+LGTG+G + ++LL E P  + V  DIS  A+E+A++NA+   V++R   + S+WF 
Sbjct: 144 KILELGTGSGCIAISLLCELPNARVVATDISLDAIEVARNNALKYHVTDRIQIIHSNWFE 203

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ +  FDVIVSNPPYI +     + LE  + +P I+L    DGL  YR IA+   + L 
Sbjct: 204 NLGKQKFDVIVSNPPYISTDEKPEMALETLNHEPYIALFAEEDGLQAYRIIAENAKKFLK 263

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +G   +EIG+ Q+  V +IF S    + + +KD  G+ RV+LF
Sbjct: 264 PNGKIVLEIGFKQEEAVTQIFLSNGYNIESVYKDLQGHSRVILF 307


>gi|85860526|ref|YP_462728.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus
           aciditrophicus SB]
 gi|85723617|gb|ABC78560.1| peptide release factor-glutamine N5-methyltransferase [Syntrophus
           aciditrophicus SB]
          Length = 316

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 84/259 (32%), Positives = 126/259 (48%), Gaps = 3/259 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L          +   P   +  R+    +  + R  K E +  I+G ++F++
Sbjct: 50  PRLDAEVLLASFLKKDRTWLYTHPGQDVSAREMDGFSFWVARRQKGEPVAYIIGRKEFWS 109

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRP+TE+LV+  +         R    ILDLGTG+GA+ +AL  E P  
Sbjct: 110 LDFAVDPRVLIPRPDTEVLVEEVIKVLGSGRASRP--EILDLGTGSGAIAVALAHECPHA 167

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS KAL ++  NA  +GV+ R   L+ +    V G FDVIVSNPPYI+S     
Sbjct: 168 RITATDISRKALAVSAGNAERHGVASRITFLEGNLLDPVMGKFDVIVSNPPYIDSGDYAR 227

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+F+PR +L  G  G+  Y  I    +  L   G   +EIG +QK ++ R+F+  
Sbjct: 228 LSAEVRNFEPREALLAGEQGMDFYSAIIPQAACRLKPGGWLLLEIGDSQKENLNRLFQQS 287

Query: 243 K-LFLVNAFKDYGGNDRVL 260
                +   KDY G  RV+
Sbjct: 288 DAYQDLAFRKDYAGRWRVV 306


>gi|325660745|ref|ZP_08149373.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472819|gb|EGC76029.1| hypothetical protein HMPREF0490_00105 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 277

 Score =  297 bits (760), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG+S     +      +++      + I R  +   +  I G ++F 
Sbjct: 21  EAELDAWYLLEYVTGISRTMYYLKQAEPAEEQAAERYFDCISRRAQRIPLQHITGEQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+ AL+            ++LD+ TG+G + ++L      
Sbjct: 81  GLPFIVNEHVLIPRQDTEILVEEALSHL------SGNEQVLDMCTGSGCILISLEHYRKG 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VG DIS +AL++AK NA +         L+SD F  V   +D+IVSNPPYI +  ++
Sbjct: 135 IRAVGADISDEALQVAKRNAESLNAD--VTFLKSDLFEQVAERYDLIVSNPPYIRTKAIE 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP I+LDG  DGL  YR I +    HL + G    EIGY+Q  DV ++ E 
Sbjct: 193 ELEEEVRLHDPMIALDGKEDGLYFYRKITEKSREHLKQGGCLLFEIGYDQGEDVAKMMEK 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   KD  G DRV+
Sbjct: 253 AGFTEVTVKKDLAGLDRVV 271


>gi|27363733|ref|NP_759261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio vulnificus CMCP6]
 gi|320157138|ref|YP_004189517.1| methylase of polypeptide chain release factors [Vibrio vulnificus
           MO6-24/O]
 gi|27359849|gb|AAO08788.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio vulnificus CMCP6]
 gi|319932450|gb|ADV87314.1| methylase of polypeptide chain release factors [Vibrio vulnificus
           MO6-24/O]
          Length = 291

 Score =  297 bits (760), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V       +   PD +L ++++      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P    
Sbjct: 88  FKVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +GVD+  +A  +A+SNA+   +       Q  WF  V     F +IVSNPPYI+      
Sbjct: 143 MGVDLQQEAKLLAESNALALNIK-NVTFKQGSWFEPVAQGTKFALIVSNPPYIDENDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L     GL+  R IA     +L   G    E GY+Q + V  I ++ 
Sbjct: 202 NQGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTL 260

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KDYGGNDRV L 
Sbjct: 261 GYQEVATEKDYGGNDRVTLG 280


>gi|255657439|ref|ZP_05402848.1| protein methyltransferase [Clostridium difficile QCD-23m63]
 gi|296449036|ref|ZP_06890826.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP08]
 gi|296879859|ref|ZP_06903832.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP07]
 gi|296262129|gb|EFH08934.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP08]
 gi|296429148|gb|EFH15022.1| protein-(glutamine-N5) methyltransferase [Clostridium difficile
           NAP07]
          Length = 282

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 140/263 (53%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  
Sbjct: 21  PRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTEFIGFAEERLNGRPIAYIVENREFMG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRP+TE LV+  +        ++  V ILD+GTG+GA+ ++L K     
Sbjct: 81  LDFFVKEGVLIPRPDTETLVEEIIEICR----EKKDVSILDIGTGSGAITISLAKYIENS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
           K +  DIS  ALEIAK NA+TN V E+   + SD F+++      FD+IVSNPPYI+   
Sbjct: 137 KIMSFDISEIALEIAKKNAITNEVDEKIKYINSDLFTAISNSNIKFDIIVSNPPYIKKQD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V+D++P  +L+GG DGL  YR I +   ++LNK G+ + E+G+NQ  DV+ I 
Sbjct: 197 IETLHTQVKDYEPYNALEGGEDGLDFYRRITEQGKKYLNKFGILAYEVGHNQAEDVINIM 256

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           +S     +   KD  G DRV++ 
Sbjct: 257 KSNGYKKIYTKKDIQGIDRVVIG 279


>gi|167759399|ref|ZP_02431526.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704]
 gi|167662956|gb|EDS07086.1| hypothetical protein CLOSCI_01746 [Clostridium scindens ATCC 35704]
          Length = 283

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L   TG+S      DPD  + + +       I        +  I   + F 
Sbjct: 26  EAALDAWYLLEFATGISKASYYGDPDKEIKEEEAARYLGYIEIRKSRIPLQHITKEQAFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PR +TE LV+ AL    P ++      +LDL TG+G + ++L+K    
Sbjct: 86  GYPFYVDEHVLIPRQDTETLVEEALKVLKPGMQ------VLDLCTGSGCILISLMKMCKG 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G G DIS  ALE+A+ NA    +      ++S  F  + G +D+IVSNPPYI + +++
Sbjct: 140 LYGTGSDISEDALEVARKNACR--LEVNAAFIRSSLFEHISGRYDLIVSNPPYIPTSVIE 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR +DP I+LDG  DGL  YR I     R+L  +G    EIGY+Q  +V  + E 
Sbjct: 198 GLQEEVRLYDPFIALDGKEDGLYFYREIIKAGIRYLRPEGYLMFEIGYDQGNEVACLMEK 257

Query: 242 RKLFLVNAFKDYGGNDRVL 260
           +    +   KD  G DRV+
Sbjct: 258 QGYRNILVKKDLAGLDRVV 276


>gi|301156076|emb|CBW15547.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus parainfluenzae T3T1]
          Length = 292

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 102/266 (38%), Positives = 147/266 (55%), Gaps = 12/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG S  Q++   ++ +D++ R  LT  + R LK E I  ILG ++F+++ L
Sbjct: 26  DALVLLQHATGKSRTQILAFDETEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLSL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP---- 120
            +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E      
Sbjct: 86  NVSEGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELSPICQ 145

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +GVD+  + +E+A+SNA  N +  +   LQS WF  VE  FD+IVSNPPYI+
Sbjct: 146 KKNIQLDVIGVDLMPEVVELAQSNAEKNQL--KVQFLQSRWFEHVEVQFDIIVSNPPYID 203

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+PR +L  G +GL+  R + +    HLN  G   +E G+ Q  +V 
Sbjct: 204 ETDEHLFQGDVR-FEPRSALVAGENGLADLRHLIEYAPGHLNDGGYLLLEHGWKQGEEVR 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
            IF       V   +DYG N+RV L 
Sbjct: 263 SIFWQNHWQGVATIRDYGDNERVTLG 288


>gi|189424096|ref|YP_001951273.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter lovleyi SZ]
 gi|189420355|gb|ACD94753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter lovleyi SZ]
          Length = 286

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 131/260 (50%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A R++   LC  TGL    + ++ D  L D +     + + R  K E +  ILG ++F 
Sbjct: 28  NARREAEWLLCEATGLDRMGLYLNFDKPLQDDELAAYRSMVARRGKREPLQHILGSQEFD 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PR +TE L++ A+  +           +LD+GTG+G + ++L    P 
Sbjct: 88  GLEFIVTRDVLIPRFDTETLLEEAVRQA------PTARTVLDIGTGSGCIAISLFHRLPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
                VD+S  AL IA+ NA  N    + + L   +F  V E  FD+IVSNPPYI S  +
Sbjct: 142 AAITAVDLSPDALSIARRNAERNNA--QIEFLLGSFFQPVSERRFDLIVSNPPYITSADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRDF+PR++LDGG DGL  YR +A    R+L  +G   +EIG  Q  DV  +  
Sbjct: 200 ADLQPEVRDFEPRLALDGGTDGLDAYRVLAAEAPRYLEPNGWLLLEIGAGQDKDVATLLA 259

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 + +  D  G  RV+
Sbjct: 260 DAGFDAIVSVPDNAGIIRVV 279


>gi|37679116|ref|NP_933725.1| methylase of polypeptide chain release factor [Vibrio vulnificus
           YJ016]
 gi|37197858|dbj|BAC93696.1| methylase of polypeptide chain release factor [Vibrio vulnificus
           YJ016]
          Length = 291

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V       +   PD +L ++++      + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHVLDKPRSYLFTWPDKILTEQEQQQFEALVARRLSGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ +AL  E P    
Sbjct: 88  FKVAPSTLIPRPDTERLVELALEKT-----ATQTGSILDLGTGTGAIAIALASELPHRTV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           +GVD+  +A  +A+SNA+   +       Q  WF  V     F +IVSNPPYI+      
Sbjct: 143 MGVDLQQEAKLLAESNALALNIK-NVTFKQGSWFEPVVQGTKFALIVSNPPYIDENDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L     GL+  R IA     +L   G    E GY+Q + V  I ++ 
Sbjct: 202 NQGDVR-FEPKSALVAEESGLADIRYIAQQARDYLEPHGWLMFEHGYDQGIAVREILDTL 260

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KDYGGNDRV L 
Sbjct: 261 GYQEVATEKDYGGNDRVTLG 280


>gi|222053789|ref|YP_002536151.1| modification methylase, HemK family [Geobacter sp. FRC-32]
 gi|221563078|gb|ACM19050.1| modification methylase, HemK family [Geobacter sp. FRC-32]
          Length = 284

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  +S   LC V GL    + V+ D  L  ++       I R  + E +  ILG ++F 
Sbjct: 27  NARLESEWMLCAVLGLDRMGLYVNFDKPLTPKELADYRGMIARRGRREPLQYILGSQEFM 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+ A+  +           ILD+GTG+G + ++L K  P 
Sbjct: 87  GLDFAVAPAVLIPRHDTEVLVNEAVKRA------GKTSSILDVGTGSGCISISLAKALPG 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
               GVD S  AL +A+ N  T+GV+     L    F  V+G  F ++VSNPPYI S  +
Sbjct: 141 AIITGVDTSVDALAVAEKNCNTHGVA--VKLLHGSLFEPVQGQQFHMVVSNPPYIPSDDL 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD++P  +LDGG DGL  YR I    + +L   G   +E+G  Q   V ++F 
Sbjct: 199 KTLQPEVRDYEPAGALDGGKDGLDFYRQIVAAATDYLVCGGWLLLEVGIGQAEQVRKLFF 258

Query: 241 SRK-LFLVNAFKDYGGNDRVL 260
                  V A KD    +RV+
Sbjct: 259 DNGKFAEVFAAKDTADIERVV 279


>gi|49473851|ref|YP_031893.1| protoporphyrinogen oxidase protein [Bartonella quintana str.
           Toulouse]
 gi|49239354|emb|CAF25687.1| Protoporphyrinogen oxidase protein [Bartonella quintana str.
           Toulouse]
          Length = 288

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 103/262 (39%), Positives = 144/262 (54%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  +TG ++   I+ PD  L   Q   L  AI R +  E ++RI+G R+FY
Sbjct: 24  EANLDAKILVEWITGTNASVRILHPDLCLSFEQITQLEQAIQRRINGEPVYRIIGKREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS +T EPRP+TE LVD  L      ++K     +LD+GTG+GA+ +A+LK+ P 
Sbjct: 84  GISFALSQETLEPRPDTETLVDLVLPLLKKYVDKLGKTTLLDMGTGSGAIAIAILKQIPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VDIS  AL+ A  NA    V  RF  L S+WF SV   FD+I+SNPPYI    + 
Sbjct: 144 SYATAVDISKDALKTAIKNAKNAKVIHRFTPLLSNWFDSVTDRFDLIISNPPYIPETDIK 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +L GG DGL  YR +A   + +L   G  +VEIG++Q+ +V  +FE 
Sbjct: 204 NLAKEVRLHDPLRALIGGKDGLHFYRKLAHEATNYLKTKGSLAVEIGHSQEKEVCDLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   +D  G  R LLF 
Sbjct: 264 NGFQFLEMRRDLSGIPRALLFT 285


>gi|219870998|ref|YP_002475373.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Haemophilus parasuis SH0165]
 gi|219691202|gb|ACL32425.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Haemophilus parasuis SH0165]
          Length = 289

 Score =  296 bits (759), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 145/264 (54%), Gaps = 4/264 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++ L++ +   L   + R  K E +  ILG ++F
Sbjct: 24  LNAKADANILLQAVTKRSKSAIFAFAETELNESELRQLAELLARRAKGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S+ T  PRP+TE LV+ AL ++  R++    ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLAVSTATLIPRPDTERLVEVALEWAYKRLDSSKNLQILDLGTGTGAIALALASELG 143

Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
              + +G+D    A+++A+ N    G  E    LQSDWF +++   FD+IVSNPPYI+  
Sbjct: 144 TKAEIIGIDKQPDAVQLAEKNRQKLGF-ENVRFLQSDWFEALKNQRFDLIVSNPPYIDKD 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I      +L  +G   +E G+ Q   V  I
Sbjct: 203 DENLTQGDVR-FEPLTALVAEQNGLSDLQKIIQNAPLYLTPNGALMLEHGWQQAASVQDI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
           F+  +   V  F+DYGGNDRV + 
Sbjct: 262 FQQNQWNAVTTFQDYGGNDRVTVA 285


>gi|289577388|ref|YP_003476015.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter italicus Ab9]
 gi|289527101|gb|ADD01453.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter italicus Ab9]
          Length = 279

 Score =  296 bits (758), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L     ++   + +  +  +   Q       I     H     I+  + F 
Sbjct: 20  NPRLEAELLLAHCFKINRTALFLRREEEVSKEQLERFLEFINMRKSHIPYQYIVKKQCFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRPETE+LV+ AL     R+++ DV  +LD+GTG+GA+ +++ K  P 
Sbjct: 80  GLEFFVDENVLIPRPETEILVEEALK----RLKRGDV--VLDIGTGSGAIAVSIAKYFPD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VDIS KA+EIAK NA   GV +R   ++SD F ++     FD IVSNPPYI+   
Sbjct: 134 CTVYAVDISKKAIEIAKHNAEKQGVLDRIFFIESDLFCNLPPNLKFDFIVSNPPYIKKRE 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    EIGY+QK +V  + 
Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGFEIGYSQKEEVTTLL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      V   KD  G DRV++ 
Sbjct: 253 EESGFKDVEIIKDLAGIDRVIIA 275


>gi|255280025|ref|ZP_05344580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bryantella formatexigens DSM 14469]
 gi|255269116|gb|EET62321.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bryantella formatexigens DSM 14469]
          Length = 307

 Score =  296 bits (758), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 119/263 (45%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG+      +         +       I R  +H  +  + G ++F 
Sbjct: 53  EADVDAWILLEYVTGIDRTHYFLKMQEPCPQEEDKRYRELIGRRAQHVPVQYLTGVQEFM 112

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++S    PR +TELLV  A              R+LD+ TG+G + ++L K +  
Sbjct: 113 GYPFRVNSQVLIPRQDTELLVLEAEKRI------HPGARVLDMCTGSGCIIISLAKRN-H 165

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  AL +A+ NA    V    + ++SD F ++ G +D IVSNPPYI S  + 
Sbjct: 166 ICAAAADISEGALAVARENAGALQVEA--EFIKSDLFENIAGTYDCIVSNPPYIASGEIP 223

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRD++PR +LDG  DGL  YR I     + L   G    EIG +Q   V  +FE 
Sbjct: 224 GLMPEVRDYEPRTALDGKADGLYFYRRIVAQAKQFLKPQGWLLCEIGCDQGAAVAALFEQ 283

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KD  G  RV+   R
Sbjct: 284 EGYREIEVKKDLAGLFRVVSGRR 306


>gi|88861345|ref|ZP_01135975.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas tunicata D2]
 gi|88816611|gb|EAR26436.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas tunicata D2]
          Length = 281

 Score =  295 bits (757), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G S   +   PD  L  +Q+     A+ R L  E I  I+G+R+F++
Sbjct: 24  AKLDAQVLLLDVIGQSRSYLFTWPDKALTAQQQTQFEQAVARRLAGEPIAHIIGYREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L +S  T  PRP+TE LV+ AL+ +LP     +  ++LDLGTGTGA+ LAL  E   +
Sbjct: 84  LKLKVSPATLIPRPDTETLVEHALSLALP-----EHAKVLDLGTGTGAIALALASEQFNW 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G D    A+ +A++N     +      +QS+WFS+     FD+IVSNPPYIE     
Sbjct: 139 QVTGCDRIEDAVVLAQTNQAALEIK-NCRFVQSNWFSAFSTEQFDLIVSNPPYIEQDDPH 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  RTI +     L   G   +E GY Q   V  IF  
Sbjct: 198 LSQGDVR-FEPLSALVAPDNGLADIRTIVNQARTFLTSGGYLLLEHGYQQAEQVSAIFLQ 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   KD  GNDRV L  
Sbjct: 257 MAYKDIRTIKDLAGNDRVTLAR 278


>gi|296101960|ref|YP_003612106.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056419|gb|ADF61157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 276

 Score =  295 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q   L+  + R    E +  ++G R+F++
Sbjct: 20  PKRDAEILLEYVTGKARTYLLAFGETELTVEQEAQLSALLARRKTGEPVAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSAATLIPRPDTECLVEQALARL-----PAAASRILDLGTGTGAIALALATERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD+   A+ +A+ N    GV+     LQS WFS++E   F +IVSNPPYI+     
Sbjct: 135 AVTAVDVMPDAVALAQRNVERLGVT-NVTVLQSSWFSALEKQTFAMIVSNPPYIDEHDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I     +HL   G   VE G+ Q   V  +F  
Sbjct: 194 LAQGDVR-FEPLTALVAGNAGLADLEHIVTTSRQHLLPGGWLLVEHGWTQGEAVRGLFRQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 TGYAAVETCRDYGGNERLTLGQ 274


>gi|78221602|ref|YP_383349.1| modification methylase HemK [Geobacter metallireducens GS-15]
 gi|78192857|gb|ABB30624.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 284

 Score =  295 bits (756), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L    GL    + V+ D  L+  +   +   + R  K E +  +LG ++F 
Sbjct: 28  NARLETEWLLSAALGLDRVGLYVNFDKPLNAEELSAVRGLVARRAKREPLQYVLGTQEFC 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+ AL  +           +LD+G G+G + +AL K  P 
Sbjct: 88  GLDFAVTPAVLIPRHDTEVLVEEALRRA------PHAATVLDIGVGSGCIAVALAKNLPD 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            +  GV+ S  A+ +A+ N   +GV  R        F    +  FD+IVSNPPYI +  +
Sbjct: 142 AQVWGVEQSAGAITLARQNVERHGV--RVILCAGSLFEPFADQRFDLIVSNPPYIPTADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR+++PR +LDGG DGL  YR I      HLN  G   VE+G  Q   V+ +F+
Sbjct: 200 DTLQPEVREYEPRAALDGGADGLDFYRIIVPAALEHLNAGGWLMVELGIGQAEAVLGMFK 259

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                     KD  G DRV+
Sbjct: 260 QAGFTGCFTAKDLNGIDRVV 279


>gi|323496830|ref|ZP_08101867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
 gi|323318089|gb|EGA71063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
          Length = 286

 Score =  295 bits (756), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 131/261 (50%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC   G     ++  PD  L   Q       + R +K E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHSLGKPRSFLLTWPDKELTTEQIERFEQLLSRRIKGEPVAYIIGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L+++  T  PRP+TE LV+ AL  +       +   ILDLGTGTGA+ LAL  E P  K 
Sbjct: 88  LSVAPSTLIPRPDTERLVEVALDKA-----NLNQGDILDLGTGTGAIALALASELPERKV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
            G+D+   A ++A SNA   G++   +     WF  V+    F +IVSNPPYIE      
Sbjct: 143 WGIDLKIDAQQLASSNADKLGIT-NCEFRAGSWFDPVDAGTQFALIVSNPPYIEENDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  + I++   R+L   G    E GY+Q   V  I  S 
Sbjct: 202 TQGDVR-FEPLSALVAEDNGLADIKHISEHARRYLLAGGWLMFEHGYDQGKAVRDILTSL 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
             + V  +KDYG NDRV +  
Sbjct: 261 GYYQVETYKDYGNNDRVTIGQ 281


>gi|297543675|ref|YP_003675977.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|296841450|gb|ADH59966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 279

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L     ++   + +  +  +   Q       I     H     I+  + F 
Sbjct: 20  NPRLEAELLLAHCFEINRTALFLRREEEISKEQLERFLEFINMRKSHIPYQYIVKKQYFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRPETE+LV+     +L R+++ DV  +LD+GTG+GA+ +++ K  P 
Sbjct: 80  GLEFFVDENVLIPRPETEILVEE----TLKRLKRGDV--VLDIGTGSGAIAVSIAKYFPD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VDIS KA+EIAK NA   GV +R   ++SD F ++     FD IVSNPPYI+   
Sbjct: 134 CTVYAVDISKKAIEIAKHNAKKQGVLDRIFFIESDLFCNLPPNLKFDFIVSNPPYIKKRE 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    EIGY+QK +V  + 
Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIREAPFYIKSGGKIGFEIGYSQKEEVTTLL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      V   KD  G DRV++ 
Sbjct: 253 EESGFKDVEIIKDLAGIDRVIIA 275


>gi|254420535|ref|ZP_05034259.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3]
 gi|196186712|gb|EDX81688.1| ribosomal protein L11 methyltransferase [Brevundimonas sp. BAL3]
          Length = 304

 Score =  295 bits (755), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 99/256 (38%), Positives = 143/256 (55%), Gaps = 5/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S   ++ DP  V+   Q       I R LK E + RI+G + F+ + L
Sbjct: 39  DARLLLEAAAGASRMDILTDPYRVVTPEQHTAYEAMIDRRLKREPVSRIVGKKGFWKIML 98

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TE L+D A+        +      +DLGTG+GA+ LALL E P   GV
Sbjct: 99  NVTPDVLSPRPDTETLMDVAML----AFARTQAFSAIDLGTGSGAILLALLAERPAAHGV 154

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G DIS +AL +AK NA    +++R   L+++W +   +  FD+++SNPPYI +  +  L 
Sbjct: 155 GTDISTEALAVAKENAANLDLNDRAAFLRTEWAAGFGDASFDLVLSNPPYIPTDHIPTLD 214

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP ++LDGG DGL  YR +A  V R L   G+ +VEIG++Q   V  +FE++  
Sbjct: 215 PEVRDHDPHLALDGGPDGLQAYRDLAPEVKRILKPGGVFAVEIGWDQGPQVKALFEAQGF 274

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD G  DRV+
Sbjct: 275 ADVKVVKDLGERDRVV 290


>gi|300716407|ref|YP_003741210.1| protein methyltransferase [Erwinia billingiae Eb661]
 gi|299062243|emb|CAX59360.1| Protein methyltransferase [Erwinia billingiae Eb661]
          Length = 276

 Score =  294 bits (754), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 96/263 (36%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DS L   Q   L + + R    E +  + G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRSWIIAFDDSELSAEQLSQLDDLLARRANGEPVAYLTGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S DT  PRP+TELLV+ ALA             +LDLGTGTGA+ LA+  E P  
Sbjct: 80  LSLSVSPDTLIPRPDTELLVEQALAHL-----PETASTVLDLGTGTGAIALAIASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD    A+ +A+SNA   G++       S+WFS+V G  F +IVSNPPYI++    
Sbjct: 135 QVTGVDRIAAAVSLAESNAQRLGIT-NARFRLSNWFSAVSGEQFTLIVSNPPYIDAEDQH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  + IA     +L   G   +E G+ Q   V  I + 
Sbjct: 194 LQQGDVR-FEPDSALIAADNGLADIKQIAAEAGHYLLPGGWLLLEHGWQQAEAVRAILQQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   KDYGGNDRV    +
Sbjct: 253 NHFVSVATAKDYGGNDRVTYAQK 275


>gi|197301353|ref|ZP_03166434.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC
           29176]
 gi|197299510|gb|EDY34029.1| hypothetical protein RUMLAC_00080 [Ruminococcus lactaris ATCC
           29176]
          Length = 306

 Score =  294 bits (753), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 136/268 (50%), Gaps = 9/268 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG+      ++PD  ++          +    +H  +  I G ++F 
Sbjct: 33  EAGLDAWYLLEFVTGVDKAHYYMNPDRRMEQSVAQEYEKVVKLRTEHIPLQHITGVQEFM 92

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLAL---- 115
            +   +S D   PR +TE+LV+ AL         ++++ VR+LDL TG+G + +++    
Sbjct: 93  GLEFQVSGDVLIPRQDTEVLVEEALKLLEQEKVPKEKETVRMLDLCTGSGCILISILYYA 152

Query: 116 LKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            KE    +G G DIS  AL IA+ N      NG     + L+SD F  V+G F +IVSNP
Sbjct: 153 AKEKIQIQGTGADISEAALRIAEENLDLLEKNGNKGMAELLESDLFEQVDGTFGMIVSNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++ ++  L  EVR  DP ++LDG  DGL  YR I +    +L K+G+   EIGY+Q 
Sbjct: 213 PYIKTSVISGLQEEVRLHDPFLALDGKEDGLFFYRKIIEESRAYLQKNGVLLFEIGYDQG 272

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             V  +        V   KD  G DR++
Sbjct: 273 EAVSELMTKEGYGQVVVKKDLAGLDRIV 300


>gi|22126174|ref|NP_669597.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis KIM 10]
 gi|45441670|ref|NP_993209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|108807398|ref|YP_651314.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Antiqua]
 gi|108811663|ref|YP_647430.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|145598395|ref|YP_001162471.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides F]
 gi|149366050|ref|ZP_01888085.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162418925|ref|YP_001606877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Angola]
 gi|165926407|ref|ZP_02222239.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938832|ref|ZP_02227386.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009186|ref|ZP_02230084.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211074|ref|ZP_02237109.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401386|ref|ZP_02306883.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419945|ref|ZP_02311698.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424706|ref|ZP_02316459.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|218929129|ref|YP_002347004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis CO92]
 gi|229894729|ref|ZP_04509909.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Pestoides A]
 gi|229897429|ref|ZP_04512585.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898072|ref|ZP_04513223.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229901941|ref|ZP_04517062.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Nepal516]
 gi|270490876|ref|ZP_06207950.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pestis KIM D27]
 gi|294503911|ref|YP_003567973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Z176003]
 gi|21959138|gb|AAM85848.1|AE013831_11 possible protoporphyrinogen oxidase [Yersinia pestis KIM 10]
 gi|45436532|gb|AAS62086.1| putative protoporphyrinogen oxidase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108775311|gb|ABG17830.1| protoporphyrinogen oxidase [Yersinia pestis Nepal516]
 gi|108779311|gb|ABG13369.1| putative protoporphyrinogen oxidase [Yersinia pestis Antiqua]
 gi|115347740|emb|CAL20655.1| putative protoporphyrinogen oxidase [Yersinia pestis CO92]
 gi|145210091|gb|ABP39498.1| protoporphyrinogen oxidase [Yersinia pestis Pestoides F]
 gi|149292463|gb|EDM42537.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis CA88-4125]
 gi|162351740|gb|ABX85688.1| methyltransferase, HemK family [Yersinia pestis Angola]
 gi|165913195|gb|EDR31818.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921628|gb|EDR38825.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991741|gb|EDR44042.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208254|gb|EDR52734.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961640|gb|EDR57661.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049082|gb|EDR60490.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056588|gb|EDR66357.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229680837|gb|EEO76932.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Nepal516]
 gi|229689113|gb|EEO81178.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229693766|gb|EEO83815.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702202|gb|EEO90221.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis Pestoides A]
 gi|262361968|gb|ACY58689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis D106004]
 gi|262365893|gb|ACY62450.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis D182038]
 gi|270339380|gb|EFA50157.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pestis KIM D27]
 gi|294354370|gb|ADE64711.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Z176003]
 gi|320015304|gb|ADV98875.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 276

 Score =  294 bits (753), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 130/261 (49%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSSATLIPRPDTECLVEQALARL-----PAMPCRILDLGTGTGAIALALATERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++     
Sbjct: 135 AVIAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L+  G   +E G+ Q   V  + ++ 
Sbjct: 194 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNS 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L  
Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273


>gi|161503113|ref|YP_001570225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160864460|gb|ABX21083.1| hypothetical protein SARI_01178 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 277

 Score =  294 bits (753), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L   Q+  L   + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTYIMAFGETPLAATQQQQLAELLRRRKQGEPIAHLTGIREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 DVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALPGQQFDMIVSNPPYIDARDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +G++    I D   + L   G   +E G+ Q   V   F  
Sbjct: 194 LSEGDVR-FEPLSALVADENGMADITHIIDHARQVLTPGGWLLLEHGWQQGEAVRATFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 ADYTDVETCRDYGGNERVT 271


>gi|183598964|ref|ZP_02960457.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827]
 gi|188021180|gb|EDU59220.1| hypothetical protein PROSTU_02408 [Providencia stuartii ATCC 25827]
          Length = 281

 Score =  294 bits (753), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  +TG S   +    ++ L   +   L + + R  + E I  I+G R+F++
Sbjct: 20  AKRDAEILLQHITGRSRTFIFAFAETELTQPEYEALESLLCRREQGEPIAYIIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            +ILDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PAQRCQILDLGTGTGAIALAIASERPDS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             +G+D +  A+ +A+ N     +      LQSDWF+S+    FD+IVSNPPYI+     
Sbjct: 135 VIIGIDFNLDAVSLAQRNQQRLAL-NNVQFLQSDWFTSLSCQHFDMIVSNPPYIDGNDDH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GLS    I      +LN  G   VE G+ Q   V  +F+ 
Sbjct: 194 LQQGDVR-FEPLTALVADNHGLSDLDHIVSTSRSYLNPQGWLLVEHGWQQGAAVRELFKQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +    DYGG DR+ L  
Sbjct: 253 YGYSNIETCLDYGGRDRISLGQ 274


>gi|157964997|ref|YP_001499821.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia massiliae MTU5]
 gi|157844773|gb|ABV85274.1| Methylase of polypeptide chain release factors [Rickettsia
           massiliae MTU5]
          Length = 511

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 10/270 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLQHVINKPIEYLLINLDEQLNEAEIEAFEKLLERRLKHEPIVYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLA 114
               ++     PR +TE+LVD       PR    D+        + IL+LGTG+G + ++
Sbjct: 84  REFIVNKHVLIPRSDTEVLVDVVFQCH-PRFRGDDISENCNDKFLNILELGTGSGCIAIS 142

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
           LL E P    +  DIS  A+EI KSNA    V++R   + S+WF ++E   FD IVSNPP
Sbjct: 143 LLCELPNANVIATDISLDAIEIIKSNAAKYSVTDRIQIIHSNWFENIETQKFDFIVSNPP 202

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI       + +E  +++P I+L    DGL  Y  IA+   + L  +G   +EIG+ Q+ 
Sbjct: 203 YIAHSEKSEMAIETINYEPSIALFAEKDGLHAYFLIAENAKQFLKPNGKIILEIGFKQEE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V +IF      + + +KD  G+ RV+LF 
Sbjct: 263 AVTQIFLDHGYNIESVYKDLQGHSRVILFT 292


>gi|90581728|ref|ZP_01237515.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Vibrio angustum S14]
 gi|90437082|gb|EAS62286.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Vibrio angustum S14]
          Length = 284

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              DS   LC V       ++  P+  LDD Q       + R L  E I  I+G R+F++
Sbjct: 24  PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQLLARRLNGEPIAYIVGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             ++LDLGTGTGA+ LA+  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKITSA-----TTKVLDLGTGTGAIALAIASECPSV 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A  N+    +      L   W+S ++   +F++IVSNPPYI+    
Sbjct: 139 QVTGIDLRQEAAELAHENSQRLSILNT-RFLAGSWYSPLQNNDVFELIVSNPPYIDHADP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +VR F+P+ +L    +GL+  R I+    +HL   G   +E G+ Q + V  I E
Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILE 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V+  +DY G DRV + C
Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279


>gi|262274707|ref|ZP_06052518.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP
           101886]
 gi|262221270|gb|EEY72584.1| Polypeptide chain release factor methylase [Grimontia hollisae CIP
           101886]
          Length = 281

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 89/264 (33%), Positives = 128/264 (48%), Gaps = 8/264 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   LC V    S  +    D  L + +       + R    E +  I+G+RDF
Sbjct: 22  LSPRIDASVLLCHVLDKPSSYLYTWSDKALTEDEEAAFNTLLARRKTGEPVAYIIGYRDF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++RL +   T  PRP+TE LV+ AL     R+ + D   +LDLGTGTGA+ LA+  E  
Sbjct: 82  WSLRLNVEPSTLIPRPDTERLVELALE----RLPQGDGA-VLDLGTGTGAIALAIASERK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                GVD+  +A+ +A  N + NG+      +QS WFS+V    F +IVSNPPYI+   
Sbjct: 137 DIAVTGVDLRAEAVALAMKNGLENGI-NNAQFMQSSWFSNVPAQRFSMIVSNPPYIDPED 195

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P+ +L  G  GL+  R I      +L   G   +E GY+Q   V  +F
Sbjct: 196 PHLSQGDVR-FEPKSALVSGEHGLADIRVICQQSPEYLVDGGWLLIEHGYDQGEAVRTLF 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  V    DY G DRV L  
Sbjct: 255 CGAGFIDVETQHDYAGLDRVTLGR 278


>gi|290475216|ref|YP_003468102.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus bovienii SS-2004]
 gi|289174535|emb|CBJ81329.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Xenorhabdus bovienii SS-2004]
          Length = 286

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 86/265 (32%), Positives = 138/265 (52%), Gaps = 10/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   ++++   +   L + + R ++ E +  I+G R+F++
Sbjct: 20  PKRDAEILLGYVTGRSRTYLIAFDETLISSEELHQLDSLLGRRIQGEPVAYIIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S  T  PRP+TE LV+ AL      +      RILDLGTGTGA+ LAL  E    
Sbjct: 80  LPFAVSPATLIPRPDTECLVEKALE-----LLPDSPARILDLGTGTGAIALALASERNDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
              GVDI+  A+ +A+ NA  N         + LQS+WF++V    FD+IVSNPPYI+  
Sbjct: 135 YVTGVDINSDAVMLAQYNAEKNAGKLAIHNVNFLQSEWFAAVGNQQFDMIVSNPPYIDEC 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L    +G++  + I       L+ +G   +E G+ Q + V  +
Sbjct: 195 DPHLQEGDIR-FEPATALIAAQNGMADLQAIVGQARHFLSPNGWLLLEHGWKQGIVVRNL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F  +    +  F+DYGGN+R+ +  
Sbjct: 254 FLEKGYQQIATFQDYGGNERITIGR 278


>gi|332306090|ref|YP_004433941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173419|gb|AEE22673.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 287

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   +C+V   ++  ++  P+  LD  Q     + + +  +   +  +LG+RDF++
Sbjct: 30  AATDSRLLMCQVLQCNTVYLMTWPEKPLDAAQLRAFEHLVEKRKQGHPVAYLLGYRDFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +S  T  PRPETELLV++AL      +   +   +LDLGTGTGA+ LAL  E P +
Sbjct: 90  LRLQVSPATLIPRPETELLVETALD-----LPLNNEANVLDLGTGTGAIALALASEKPDW 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  G+D +  A+ +AK N   N +       QSDWFS++    FD+IVSNPPY+E   V 
Sbjct: 145 QVAGIDKNADAVALAKQNGQANKLPH-VRFTQSDWFSNLSAASFDLIVSNPPYVEQSSVY 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I      +L  +     E G+ Q   V  +   
Sbjct: 204 LQQGDVR-FEPASALTSGEDGLDDIRFIIPNAIEYLAPNAWLVFEHGHLQAQGVQALLRE 262

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V +  D  G+ RV L C
Sbjct: 263 NSFEQVRSVSDLNGHPRVTLGC 284


>gi|51596332|ref|YP_070523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 32953]
 gi|170024409|ref|YP_001720914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis YPIII]
 gi|186895375|ref|YP_001872487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis PB1/+]
 gi|51589614|emb|CAH21244.1| putative protoporphyrinogen oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|169750943|gb|ACA68461.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pseudotuberculosis YPIII]
 gi|186698401|gb|ACC89030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Yersinia pseudotuberculosis PB1/+]
          Length = 276

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 128/261 (49%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSSATLIPRPDTECLVEQALARL-----PSMPCRILDLGTGTGAIALALASERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++     
Sbjct: 135 AVIAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L   G   +E G+ Q   V    ++ 
Sbjct: 194 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNS 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L  
Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273


>gi|268592709|ref|ZP_06126930.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM
           1131]
 gi|291311852|gb|EFE52305.1| protein-(glutamine-N5) methyltransferase [Providencia rettgeri DSM
           1131]
          Length = 277

 Score =  293 bits (752), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG S   +    ++ L   +       + R  K E I  I+G R+F++
Sbjct: 20  AKRDAEILLEHVTGRSRTYLFAFGETELKAEEFQQAELLLQRREKGEPIAYIIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE +V+ AL+    +  +     ILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLYVSPATLIPRPDTECIVEQALSRLTEQKNQ-----ILDLGTGTGAIALALASEMQQS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           + +GVD +  A+ +A+ N     +S     +QS+WFSS+    FD+I+SNPPYI+   + 
Sbjct: 135 QVIGVDFNPDAVALAQRNQQRLNIS-NVKFIQSNWFSSLSIQQFDMIISNPPYIDENDMH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+    I     ++L   G   +E G+ Q + V  +F+ 
Sbjct: 194 LSEGDVR-FEPLTALVAKDEGLADLMHIIKESKKYLKNQGWLLLEHGWTQGLAVRDLFKV 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +    DYGG +R+ L  
Sbjct: 253 HGYTKIETCLDYGGRERISLGQ 274


>gi|256821857|ref|YP_003145820.1| HemK family modification methylase [Kangiella koreensis DSM 16069]
 gi|256795396|gb|ACV26052.1| modification methylase, HemK family [Kangiella koreensis DSM 16069]
          Length = 286

 Score =  293 bits (751), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L      +   +   P+ +L + Q+    + I R  + E    I+G ++F+
Sbjct: 28  EAALDAEILLAFAIDKNRTWLKTWPEYLLSEDQKSCFEDFISRRRQGEPTAYIIGEQEFW 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++ DT  PRPETE+LV+ AL     RI   +   I+DLGTG+GA+ LA+  E P 
Sbjct: 88  SLTLNVTRDTLIPRPETEMLVEQALL----RIPSDESYSIVDLGTGSGAIALAIASERPQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIV 180
                +D+S  AL++A++NA +N + +     Q  W S+ + G  D+IVSNPPY+     
Sbjct: 144 ATVWALDMSELALKVAQANAESNQI-DNVTFEQGSWLSNWLHGKLDMIVSNPPYVAPNDP 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                    ++P  +L     GLS  R I    + HL  DG    E GY+Q   V  I +
Sbjct: 203 HLAD---LVYEPVTALVAEDKGLSDIRQITQQATEHLKPDGYLLFEHGYDQGQAVREILQ 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                 +   KDY G DRV L 
Sbjct: 260 QTGFEQIETIKDYAGLDRVTLG 281


>gi|319897177|ref|YP_004135372.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Haemophilus influenzae F3031]
 gi|317432681|emb|CBY81044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3031]
          Length = 292

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  L   + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLIALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELS 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+IVSNP
Sbjct: 142 SICQKRLISLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSCWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|77360002|ref|YP_339577.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas haloplanktis TAC125]
 gi|76874913|emb|CAI86134.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas haloplanktis TAC125]
          Length = 279

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +       +   P+S L   Q+        R L  E +  I+G R+F++
Sbjct: 23  AKLDAQVLLLHILQKPHSYLFTWPESTLSTEQQQQFDTFCQRRLNGEPVAHIIGQREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE LV+ AL  ++P        ++LDLGTGTGA+ LAL  E P +
Sbjct: 83  LSLEVNATTLIPRPDTETLVEQALEMAVP-----SNAKVLDLGTGTGAIALALGSEMPTW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  N     +       QS+WFS++ G  F +IVSNPPYIE+  + 
Sbjct: 138 QITAVDRVADAVALATRNQQRLAI-NNVQVKQSNWFSALNGEKFHLIVSNPPYIETTDIH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    DGL+  + I      +L+  G   +E G+ Q   V + F  
Sbjct: 197 LKQGDVR-FEPLSALVADDDGLADIKQIITQSRDYLHAKGYLLIEHGFEQSGAVSQFFAQ 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   KD G NDRV L  
Sbjct: 256 MGFINIKTVKDLGNNDRVTLAQ 277


>gi|167471071|ref|ZP_02335775.1| methyltransferase, HemK family protein [Yersinia pestis FV-1]
          Length = 267

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 130/261 (49%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F++
Sbjct: 11  PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 70

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E    
Sbjct: 71  LPLSVSSATLIPRPDTECLVEQALARL-----PAMPCRILDLGTGTGAIALALATERRDC 125

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++     
Sbjct: 126 AVIAVDINADAVALARHNAEKLTI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 184

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P  +L    +G++    I      +L+  G   +E G+ Q   V  + ++ 
Sbjct: 185 NEGDVR-YEPHSALVAAAEGMADLAAIVSQAPGYLDPGGWLMLEHGWQQANAVQELLKNS 243

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L  
Sbjct: 244 GFSAVMTCKDYGNNDRVTLGQ 264


>gi|330445231|ref|ZP_08308883.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489422|dbj|GAA03380.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 284

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              DS   LC V       ++  P+  LDD Q       + R +  E +  I+G R+F++
Sbjct: 24  PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDAQYEAFQALLTRRINGEPVAYIIGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             ++LDLGTGTGA+ LA+  E P  
Sbjct: 84  LSLKVSPSTLIPRPDTERLVELALEKI-----SASATKVLDLGTGTGAIALAIASECPML 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A ++A  N+    +S     L   W+S ++    FDVIVSNPPYI+    
Sbjct: 139 QVTGIDLRQEAADLALENSQRLSISNT-RFLAGSWYSPLQQNETFDVIVSNPPYIDEADP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +VR F+P+ +L    +GL+  R I+D   +HL   G   +E G+ Q   V  I  
Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISDQGRQHLAIGGWLLMEHGFEQGSAVREILA 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V+  +DY G DRV + C
Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279


>gi|197335225|ref|YP_002155530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio fischeri MJ11]
 gi|197316715|gb|ACH66162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio fischeri MJ11]
          Length = 284

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ D +       + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  +      ILDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+E+AK NA  N +    +  Q  WF    +   FD+IVSNPPYI+       
Sbjct: 142 GVDYQDDAVELAKENAKINHI-NNVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G S    I      +L   G   +E G+ Q   +   FE   
Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   +DY GNDRV L  
Sbjct: 260 YINVKTEQDYTGNDRVTLGQ 279


>gi|148266071|ref|YP_001232777.1| HemK family modification methylase [Geobacter uraniireducens Rf4]
 gi|146399571|gb|ABQ28204.1| [protein release factor]-glutamine N5-methyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 284

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  +S   LC V GL    + V+ D  L + +       + R  K E +  ILG ++F 
Sbjct: 28  NARLESEWMLCAVLGLDRVGLYVNFDKPLTEAELSGYRGMVTRRSKREPLQYILGSQEFM 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV  A A         +  RILD+G G+G V +AL K  P 
Sbjct: 88  GLEFEVSPAVLIPRHDTEVLVAEAAA------RCGEHCRILDIGVGSGCVSVALAKALPT 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
              +GVD S +AL +A+ NA   GV+      +   F    +  FD+IVSNPPYI +  +
Sbjct: 142 ATILGVDSSPQALVLAQKNADKQGVT--VSLFEGSLFEPFQDQRFDLIVSNPPYIPTDDL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD++P  +LDGG DGL  YR I    S +LN  G    E+G  Q   V+ + +
Sbjct: 200 KTLQPEVRDYEPIQALDGGADGLDFYRLIVPAASDYLNPGGWLLFEVGVGQAEAVLGLLD 259

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   KD  G +RV+
Sbjct: 260 KTGFGELFTAKDPNGIERVV 279


>gi|271500558|ref|YP_003333583.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dickeya dadantii Ech586]
 gi|270344113|gb|ACZ76878.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dickeya dadantii Ech586]
          Length = 282

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT      ++   ++ L D +   L + + R +  E I  ++G+R+F++
Sbjct: 20  PKRDAEILLEHVTDKRRTFLLAFGETELTDDEVLALESLLARRVNGEPIAYLVGYREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA             +LDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALAVL-----PDGASSVLDLGTGTGAIALAIAHERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + VG+D    A+ +A  NA   G+      L  DWFS + G  F VIVSNPPYI+     
Sbjct: 135 QVVGIDRQPDAVALASQNARRLGI-HNARFLPGDWFSPLAGQRFAVIVSNPPYIDEHDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR F+P  +L  G  GL+  + I       L  DG   +E G+ Q   V  +   
Sbjct: 194 LLRGDVR-FEPASALVAGAQGLADLQHIIRQAGDFLLDDGWLLLEHGWQQGEAVRGLLSQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V  ++DYG N+RV L  
Sbjct: 253 QGFVQVKTYRDYGDNERVTLGQ 274


>gi|121601994|ref|YP_988677.1| HemK family methyltransferase [Bartonella bacilliformis KC583]
 gi|120614171|gb|ABM44772.1| methyltransferase, HemK family [Bartonella bacilliformis KC583]
          Length = 288

 Score =  293 bits (750), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/261 (40%), Positives = 150/261 (57%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   +  VT  S+   I+ PD  L  +Q   L  AI R +  E  HRI+G R+FY
Sbjct: 24  EANLDTKLLVEWVTSTSTIDRILQPDMCLSSQQIAQLEEAIKRRISGEPTHRIIGTREFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS +T EPRP+TE+L+D  L     +++K     +LD+GTGTGA+ +A+LK+   
Sbjct: 84  GISFALSKETLEPRPDTEILIDLVLPILKKKVKKSGKATLLDMGTGTGAIAIAILKQVVQ 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDI+  AL+ A  NA    V  RF  L S+WF++V G FD+I+SNPPYI    + 
Sbjct: 144 TCAVAVDIAEDALKTATQNAKNADVLHRFTPLLSNWFNTVTGQFDLIISNPPYIPEKDIP 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR +DP  +L GG DGL  YR +AD  + +L ++G  +VEIGY+QK +V  +FE 
Sbjct: 204 NLAKEVRQYDPLRALIGGKDGLDFYRKLADESATYLKEEGYIAVEIGYSQKKEVCNLFEK 263

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +    D  G  R +LF
Sbjct: 264 NGFKCLKIRDDLSGIPRAILF 284


>gi|212711978|ref|ZP_03320106.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
           30120]
 gi|212685500|gb|EEB45028.1| hypothetical protein PROVALCAL_03054 [Providencia alcalifaciens DSM
           30120]
          Length = 277

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L   TG S   ++   ++ L   ++  L   ++R  + E I  I+G R+F++
Sbjct: 20  AKRDAQILLQYTTGRSRTYILAFDETELTSDEQTQLDALLMRREQGEPIAYIVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL   LP  E     RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSPATLIPRPDTECLVEQAL-VRLPNAEC----RILDLGTGTGAIGLALASELPNS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
             VGVD + +A+ +A+ N     +       QSDWF+S+   LFD+IVSNPPYI+   + 
Sbjct: 135 CVVGVDFNPEAVALAQRNQQRLALP-NIQFSQSDWFASLPNELFDMIVSNPPYIDEGDIH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G S    I     ++L + G   +E G+ Q   V ++F  
Sbjct: 194 LSQGDVR-FEPSTALIADNHGFSDLEHIIATSKQYLKQQGWLLLEHGWQQGSTVRKLFNE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V    DYGG +RV L  
Sbjct: 253 NGYTNVETCLDYGGKERVSLGQ 274


>gi|197284959|ref|YP_002150831.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Proteus mirabilis HI4320]
 gi|194682446|emb|CAR42348.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis HI4320]
          Length = 282

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT  +   +I   ++VL + ++  L++ + R +K E I  ++G R+F++
Sbjct: 20  PKRDAEILLGHVTKRARTYLIAFSETVLLEDEQVQLSSLLARRIKGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL     +       RILDLGTGTGA+ LA+  E    
Sbjct: 80  LPLKVSPATLIPRPDTECLVEKALEKLSAQAS-----RILDLGTGTGAIALAIASERSDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +GVD   +A+ +A  NA    +S   +  +S WFSS+ G  FD+I+SNPPYI+     
Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    I     + L  +G   +E G+ Q   V  IF  
Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V  F+DYGGN+RV +  
Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274


>gi|295109134|emb|CBL23087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus obeum A2-162]
          Length = 290

 Score =  292 bits (749), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 13/272 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  V  ++        D  +D +          +  +H  +  I G   F 
Sbjct: 22  EAGLDAWLLLEYVADINRAWYYAHMDETVDGKTEARYLEMCKKRAQHIPLQHITGRAFFM 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PR +TE+LV++AL      +++    +ILD+ TG+G + L+ L E   
Sbjct: 82  GYEFFVDERVLVPRQDTEVLVETALT----HLKECRAPKILDMCTGSGCILLSFLMERTD 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNP 172
             G GVDIS  AL +AK N V   + +R + +QSD FS              +D+++SNP
Sbjct: 138 AVGTGVDISEGALAVAKQNRVHLQLEDRAEFVQSDLFSGDYFKKNSGNTVTEYDMLISNP 197

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  +  L  EVR  DP ++LDG  DGL  YR I     ++L   G    EIG +Q 
Sbjct: 198 PYIPSGEIPGLMEEVRSHDPVLALDGKEDGLFFYREITAQADKYLRAGGWLMYEIGCDQG 257

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             V +I ++     V   +D  G DRV++  +
Sbjct: 258 ESVSKIMKTDNFINVEVIQDLAGLDRVVIGQK 289


>gi|253580115|ref|ZP_04857382.1| modification methylase [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848634|gb|EES76597.1| modification methylase [Ruminococcus sp. 5_1_39BFAA]
          Length = 321

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 35/294 (11%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG S        +  + +         I R   H  +  +     F 
Sbjct: 24  EAGLDAWLLLEYVTGKSRAYYFAYGEESVTESVAERYLELISRRAGHIPLQHLTHQAFFM 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +  +   PR +TE LV+SAL      ++      ILD+ TG+G + +++LKE   
Sbjct: 84  GHEFYVDKNVLVPRQDTETLVESALEC----MKAVKNPYILDMCTGSGCILISILKERAD 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----------------- 164
             G GVD+S +AL++A  NA T  V+E  + +QS+ FS ++ +                 
Sbjct: 140 AHGTGVDLSDEALKVAVRNARTLEVAEHAEFVQSNLFSEMQNIVYGTEYMKRTAVKDTVK 199

Query: 165 --------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                         +D+I+SNPPYI +  ++ L  EV+  DPR++LDG  DGL  YR I 
Sbjct: 200 MTECENSNRNYSRAYDMIISNPPYIPTAEIEDLMDEVKLHDPRMALDGMEDGLYFYRAIT 259

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                HL   G    EIG +Q  DV  +    K   +   +D  G DRV+L  +
Sbjct: 260 KQAQDHLVPGGWLLYEIGCSQGEDVAALLRKYKFEDIEIRQDLAGLDRVVLGRK 313


>gi|269138758|ref|YP_003295459.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|267984419|gb|ACY84248.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|304558751|gb|ADM41415.1| hypothetical protein ETAF_1303 [Edwardsiella tarda FL6-60]
          Length = 279

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L   Q   LT+ + R  + E +  ++G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRSFLLAFGETRLTAAQLTQLTSLLARREQGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             +I+DLGTGTGA+ LAL  E P  
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALMRL-----PAAPAQIVDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   V+ +  A+ +A+ NA   G+S R + LQ  WF+ + G  F +IVSNPPYI++    
Sbjct: 135 RVSAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R IA     HL   G   +E G+ Q   V  +   
Sbjct: 194 LSQGDVR-FEPASALVAAEQGLADLRAIARQAPDHLEPGGWLLLEHGWQQGAAVRALLTE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V + +DYG N+RV L  
Sbjct: 253 YGFCCVESVRDYGDNERVTLGQ 274


>gi|148826081|ref|YP_001290834.1| hypothetical protein CGSHiEE_05375 [Haemophilus influenzae PittEE]
 gi|229847125|ref|ZP_04467230.1| HemK [Haemophilus influenzae 7P49H1]
 gi|148716241|gb|ABQ98451.1| HemK [Haemophilus influenzae PittEE]
 gi|229809954|gb|EEP45675.1| HemK [Haemophilus influenzae 7P49H1]
 gi|309973232|gb|ADO96433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae R2846]
          Length = 292

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 100/270 (37%), Positives = 147/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHVTGKSRTQILTFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALARSNAERNQL--NVQFLQSSWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+         +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDVQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288


>gi|238919471|ref|YP_002932986.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Edwardsiella ictaluri 93-146]
 gi|238869040|gb|ACR68751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Edwardsiella ictaluri 93-146]
          Length = 279

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   +++L   Q   LT+ + R ++ E +  ++G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRSFLLAFGETLLTAAQLAQLTSLLARRVQGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL            V+I+DLGTGTGA+ LAL  E P  
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALLRL-----PATPVQIVDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   V+ +  A+ +A+ NA   G+S R + LQ  WF+ + G  F +IVSNPPYI++    
Sbjct: 135 QVSAVEFNPDAVALAQHNAARLGLS-RVEILQGSWFTPLAGRRFTLIVSNPPYIDAADGH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R IA     +L   G   +E G+ Q   V  +   
Sbjct: 194 LSQGDVR-FEPASALVAAEQGLADLRAIARQAPDYLALGGWLLLEHGWQQGAAVRALLTE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V + +DYG N+RV L  
Sbjct: 253 YGFCRVESVRDYGNNERVTLGQ 274


>gi|268317361|ref|YP_003291080.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252]
 gi|262334895|gb|ACY48692.1| modification methylase, HemK family [Rhodothermus marinus DSM 4252]
          Length = 304

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 87/266 (32%), Positives = 129/266 (48%), Gaps = 7/266 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A R++   LC V G S  Q+   P+  +D  +R      + R L+ E +  +LG+ +F 
Sbjct: 36  DARRNAEWMLCEVLGCSRAQLYAYPERPVDAARRARFAELLARRLRREPLQYVLGYVEFL 95

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL +      PRPETE L +  L      ++     R+LD+GTG+G + LA+      
Sbjct: 96  GLRLEVGPGVLVPRPETEWLTERVL----QELQSTPGPRVLDVGTGSGCIALAIKHHRSD 151

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                 DIS +AL IA+ NA   G+   +   D L   +  +V G FD+IVSNPPY+   
Sbjct: 152 ADVWACDISPEALSIARRNAERLGLQVHWVEADVLADSFPENVPGPFDLIVSNPPYLALH 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D L  EVRD++P ++L  G D L  YR +A      L   G  + E+  +   DVV +
Sbjct: 212 EADELPPEVRDYEPPVALYAGEDPLRFYRALARHGHVLLKPGGRLACEVHAHYGTDVVAL 271

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           FE+     V    D  GN R++   R
Sbjct: 272 FEACGYEAVRLECDLAGNPRLVWARR 297


>gi|59711376|ref|YP_204152.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Vibrio fischeri ES114]
 gi|59479477|gb|AAW85264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Vibrio fischeri ES114]
          Length = 284

 Score =  292 bits (748), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ D +       + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKIVSDEELGNFNALLERRLAGEPIAYIVGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  +      ILDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALDHLTPNAQS-----ILDLGTGTGAIALAIASEMPTLNVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+E+AK NA  N +    +  Q  WF    +   FD+IVSNPPYI+       
Sbjct: 142 GVDYQDDAVELAKGNAKINHI-NNVEFRQGSWFEPISLSDKFDIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G S    I      +L   G   +E G+ Q   +   FE   
Sbjct: 201 EGDVR-FEPQTALVAEQNGFSDLIHIMQHGREYLLNGGWLMMEHGFEQGEQLRHFFEEHG 259

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   +DY GNDRV L  
Sbjct: 260 YINVKTEQDYAGNDRVTLGQ 279


>gi|311693604|gb|ADP96477.1| modification methylase, HemK family [marine bacterium HP15]
          Length = 283

 Score =  292 bits (747), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +TGLS       P+  + D         +   +    +  +LG ++F++
Sbjct: 25  PRLDAELLLSHITGLSRTSFRAWPEREVTDTHAEAFERLVQDRVAGRPVAHLLGHQEFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA  LPR        +LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPLKVSASTLIPRPDTECLVEVALALPLPR-----QASVLDLGTGTGAIALALASEHGGW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +    D   +A+ +A+ NAV  G+      +QS WFS +E   FD+IVSNPPYI      
Sbjct: 140 RISACDAVPEAVALARENAVALGL--NLSVVQSSWFSGLEPERFDLIVSNPPYIPDSDRH 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I       L + G   VE G++Q   V ++F +
Sbjct: 198 LEEGDVR-FEPASALVSGSDGLDDLRLIISQAPDWLFEGGWLLVEHGFDQAEAVAQLFHA 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V   +DYG  DR+ L  
Sbjct: 257 RGFKAVETRQDYGNRDRMTLGQ 278


>gi|310767483|gb|ADP12433.1| Protein methyltransferase [Erwinia sp. Ejp617]
          Length = 281

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DS LD      L   + R    E I  + G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRAWLIGFDDSELDAVALAQLDALLKRRTAGEPIAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L+++ DT  PRP++E+LV+ ALA             ILDLGTG+GA+ LAL  E P  
Sbjct: 80  LSLSVTPDTLIPRPDSEVLVEQALAHL-----PVAAGSILDLGTGSGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + +G+D    A+ +A+ NA   G++     +  DWFS+++   F VIVSNPPYI++    
Sbjct: 135 QVIGIDRIPAAVALAQHNAARLGLT-NATFMPGDWFSALKQQQFAVIVSNPPYIDATDKH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I   
Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +DYGGNDRV    +
Sbjct: 253 HHFCQIATCQDYGGNDRVTFGQK 275


>gi|283832856|ref|ZP_06352597.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC
           29220]
 gi|291071456|gb|EFE09565.1| protein-(glutamine-N5) methyltransferase [Citrobacter youngae ATCC
           29220]
          Length = 277

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++VL + QR  L   + R  + E +  + G R+F++
Sbjct: 20  PRRDAEILLEFVTGKGRTFILAFGETVLTEAQREQLATLVARRQRGEPVAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PASACRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD    A+ +A  N   +   +    LQSDWFS++ G  FD+IVSNPPYI+     
Sbjct: 135 AVTAVDRMPDAVALAMRN-TRHLAIDNVQVLQSDWFSALSGQQFDMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G +GL+    I D     L   G   +E G+ Q   V   F  
Sbjct: 194 LAQGDVR-FEPLSALVAGENGLADIVHIIDSSRSVLTPGGYLLLEHGWQQGAAVREAFIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYLAVETCRDYGGNERITLGR 274


>gi|89073092|ref|ZP_01159631.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium sp. SKA34]
 gi|89051045|gb|EAR56502.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium sp. SKA34]
          Length = 284

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              DS   LC V       ++  P+  LDD Q       + R L  E I  I+G R+F++
Sbjct: 24  PQLDSAVLLCHVLDKPRSYLLTWPEKQLDDEQYNIFQQVLARRLNGEPIAYIVGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL        K     +LDLGTGTGA+ LA+  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKITSATSK-----VLDLGTGTGAIALAIASEYPSL 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A  N+    +      L   W+S ++   +F++IVSNPPYI+    
Sbjct: 139 QVTGIDLRQEAAELAHENSQRLSILNT-RFLAGSWYSPLQHNDVFELIVSNPPYIDHADP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +VR F+P+ +L    +GL+  R I+    +HL   G   +E G+ Q + V  I E
Sbjct: 198 HLVQGDVR-FEPKSALVADDNGLADIRIISAQGRKHLTVGGWLLMEHGFEQGLAVRTILE 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V+  +DY G DRV + C
Sbjct: 257 QLGYQQVSTSQDYAGLDRVTMGC 279


>gi|120555271|ref|YP_959622.1| HemK family modification methylase [Marinobacter aquaeolei VT8]
 gi|120325120|gb|ABM19435.1| [protein release factor]-glutamine N5-methyltransferase
           [Marinobacter aquaeolei VT8]
          Length = 285

 Score =  292 bits (747), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +TGL+       P+  +   Q       +      + +  +LG ++F++
Sbjct: 26  PRLDAELLLSHITGLTRTSFRAWPERDVPVEQAERFFELVGERASGQPVAYLLGEQEFWS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP TE +V++AL+  LP         +LDLGTGTGA+ LAL  E P +
Sbjct: 86  LPLKVSPSTLIPRPGTECVVEAALSLELPA-----RASVLDLGTGTGAIALALASEQPGW 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           + +  D    A+ +A+ N+ + G+      ++S WF  +  G FD+++SNPPYI +    
Sbjct: 141 QVMASDRVEDAVALARENSQSLGLP--ITVVKSHWFDQIPAGTFDLLISNPPYIPASDRH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R +       LN +G   +E GY+Q   V  +F  
Sbjct: 199 LREGDVR-FEPESALVAGDDGLDDIRLLVTEGLNWLNPNGWMLLEHGYDQGSAVRDLFAK 257

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KDYGGNDR+ L  +
Sbjct: 258 AGWRNMETRKDYGGNDRMTLARK 280


>gi|167038491|ref|YP_001666069.1| HemK family modification methylase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167038766|ref|YP_001661751.1| HemK family modification methylase [Thermoanaerobacter sp. X514]
 gi|256751360|ref|ZP_05492239.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300913649|ref|ZP_07130966.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X561]
 gi|307723336|ref|YP_003903087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X513]
 gi|320116887|ref|YP_004187046.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166853006|gb|ABY91415.1| modification methylase, HemK family [Thermoanaerobacter sp. X514]
 gi|166857325|gb|ABY95733.1| modification methylase, HemK family [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256749742|gb|EEU62767.1| modification methylase, HemK family [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|300890334|gb|EFK85479.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X561]
 gi|307580397|gb|ADN53796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter sp. X513]
 gi|319929978|gb|ADV80663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 279

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L    G+    +I+  +  +++ +       +     H     I+    F 
Sbjct: 20  NPKLEAELLLAYCLGMDRINLIIKREDEVEEGELAKFLGLLNMRKSHIPYQYIVKKHYFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRPETE+LV+  L         +    ++D+GTG+GA+ ++++K  P 
Sbjct: 80  GLEFFVDENVLIPRPETEILVEEVLKRL------KKGNTLIDIGTGSGAIAVSVVKYFPD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VDIS KALE+AK NA  + V ++   ++SD FS V     FD IVSNPPYI+   
Sbjct: 134 CFVYAVDISRKALEVAKYNAKKHNVLDKIVFIESDVFSQVPKNIKFDFIVSNPPYIKRGE 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P I+LDGG DGL  Y+ I +G   +LN +G    E+GY+QK +V  + 
Sbjct: 194 LETLQEEVKK-EPIIALDGGEDGLFFYKKIIEGAPFYLNPEGAICFEMGYDQKEEVTDLL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  +   KD  G DRV++  
Sbjct: 253 TKGGFKNIEVIKDLSGIDRVVIAR 276


>gi|225027776|ref|ZP_03716968.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353]
 gi|224954922|gb|EEG36131.1| hypothetical protein EUBHAL_02035 [Eubacterium hallii DSM 3353]
          Length = 297

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 15/268 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S +FL     +   +  ++P+  + +     L + + +  +   +  ++G  +F     
Sbjct: 25  ESWAFLDWKLHIDRAEFYMNPNGEVKEELLAELESVLKQREQRVPLQYLMGECEFMGYDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRI-------------EKRDVVRILDLGTGTGAVC 112
            +      PR +TE LV+ A+     R              +    V++LDL TG+G + 
Sbjct: 85  YVDERVLIPRQDTECLVELAVEDIRNRKTQNRCESNNTADQKNEQKVKVLDLCTGSGCIG 144

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           +++ K  P  +    DIS  AL +AK NA           ++ + F ++EG FD I+SNP
Sbjct: 145 ISVAKLCPDTEVTLADISEGALSVAKKNAQNLDAG--VTLIKGNLFENIEGRFDYILSNP 202

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S +++ L  EV++ +PR++LDG  DGLS YR I +    +LN DG    EIG  Q 
Sbjct: 203 PYIPSEVIEGLMPEVKEHEPRLALDGEADGLSFYREIINEAPDYLNPDGRIYFEIGAEQG 262

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            D+  +   R    V   KD  G DR++
Sbjct: 263 EDLTHLMNERGFSEVKVHKDLAGLDRIV 290


>gi|227355361|ref|ZP_03839762.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis ATCC 29906]
 gi|227164585|gb|EEI49456.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Proteus mirabilis ATCC 29906]
          Length = 282

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT  +   +I   ++VL + +   L++ + R +K E I  ++G R+F++
Sbjct: 20  PKRDAEILLGHVTKRARTYLIAFSETVLLEDELVQLSSLLARRIKGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL     +       RILDLGTGTGA+ LA+  E    
Sbjct: 80  LPLKVSPATLIPRPDTECLVEKALEKLSAQAS-----RILDLGTGTGAIALAIASERSDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +GVD   +A+ +A  NA    +S   +  +S WFSS+ G  FD+I+SNPPYI+     
Sbjct: 135 RVLGVDFQPEAVALAIENAQHLALS-NVEFTESCWFSSLSGYQFDMIISNPPYIDEEDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    I     + L  +G   +E G+ Q   V  IF  
Sbjct: 194 LYQGDVR-FEPLTALVAADHGFADIELIITNARQFLANNGWVLIEHGWQQGERVRNIFID 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V  F+DYGGN+RV +  
Sbjct: 253 KGYCCVETFRDYGGNERVTVGR 274


>gi|170742858|ref|YP_001771513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium sp. 4-46]
 gi|168197132|gb|ACA19079.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium sp. 4-46]
          Length = 295

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 107/262 (40%), Positives = 152/262 (58%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G+S   +++  D  LD+ Q   L+ A+ R    E + RILG  +F+ 
Sbjct: 30  AALDARLILTETLGVSRVDLLLGADGPLDEAQARSLSAALRRRASGEPVARILGAWEFWG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS DT  PRP+TE LV++AL    PR      +R+LDLGTG+G + +ALL E P  
Sbjct: 90  LPFRLSPDTLVPRPDTETLVEAALDLGHPR---DAALRLLDLGTGSGCLLVALLSEWPRA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GVG+D+S +AL  A++NA  NGV  R   L+ DW +++ G FDV V+NPPYI + ++  
Sbjct: 147 EGVGIDLSLEALRTARANAARNGVGARAAWLRGDWAAALAGRFDVAVANPPYIAANLIPG 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR++LDGG DGL  YR I    +  L   G   VEIGY+Q+  +  + E+ 
Sbjct: 207 LAPEVRDHDPRLALDGGADGLDCYRVILAQAADFLAPGGHLVVEIGYDQEEALRHLAEAA 266

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L +V   +D  G+ R  L  R
Sbjct: 267 GLRVVVVRRDLAGHPRAALLAR 288


>gi|94500022|ref|ZP_01306557.1| modification methylase, HemK family protein [Oceanobacter sp.
           RED65]
 gi|94427880|gb|EAT12855.1| modification methylase, HemK family protein [Oceanobacter sp.
           RED65]
          Length = 281

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 10/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V   +   +    D+ L   Q    T  + R  + E +  I+G   F++
Sbjct: 23  AKLDAELLLLHVLKQTRTFLFTHSDTELSQEQYLQFTQLLERRKQGEPVAYIIGQTGFWD 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +S  T  PR +TE L+D  +    P+        +LDLGTGTGA+ LA  KE P  
Sbjct: 83  LTIKVSPATLIPRGDTESLMDYIVEHFNPK-------NVLDLGTGTGALALATAKEYPQA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             V VD+  +A+ +AK NA  N V+   + LQSDWF+ V    FD+IVSNPPYI++    
Sbjct: 136 SVVAVDVIEEAVALAKENAKLNKVT-NVEILQSDWFALVPKRRFDLIVSNPPYIDANDHH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR ++P+ +L     GL+    I +     L +DG   VE GY+Q   V  IF  
Sbjct: 195 LGEGDVR-YEPKSALVAERHGLADIEKICNQALSFLTEDGCLMVEHGYDQGPHVRAIFSQ 253

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   +D  G DR  L 
Sbjct: 254 SGFSNIETHQDLAGRDRFTLG 274


>gi|291550092|emb|CBL26354.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus torques L2-14]
          Length = 312

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 133/269 (49%), Gaps = 10/269 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG++  +  +DPD  +D          + +   H  +  I G ++F 
Sbjct: 39  EADLDAWYLLEFVTGITKARYYMDPDQSMDPEAWKKYKEYLEKRRNHIPLQHITGSQEFM 98

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESP 120
            +   ++     PR +TE+LV+ AL      I   +  +++LD+ TG+G + L+++  + 
Sbjct: 99  GLEFLVNEHVLIPRQDTEVLVEEALEMMKQEIFRSKGCLQLLDMCTGSGCILLSVMHYAE 158

Query: 121 F----FKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSVEGLFDVIVSN 171
                 +G GVD S +AL +A+ N           + + + + SD F +V   +D+I+SN
Sbjct: 159 QKGIFIEGTGVDFSEQALMVAQKNEKHLRSTKKDENGKVNWILSDLFENVSETYDMILSN 218

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI +  ++ L  EV+  DP  +LDG  DGL  YR I     + L   G+ + EIGY+Q
Sbjct: 219 PPYIRTAEIEKLQDEVKLHDPFSALDGKEDGLYFYRKIVTDAKQFLKTGGILAFEIGYDQ 278

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +V  + +      V   KD  G DR++
Sbjct: 279 GKEVSDLMKKAGYDKVFVKKDLAGLDRIV 307


>gi|295095635|emb|CBK84725.1| [protein release factor]-glutamine N5-methyltransferase
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 276

 Score =  291 bits (746), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q+  L   + R    E +  ++  R+F++
Sbjct: 20  PKRDAEILLEHVTGKARTYLLAFGETALTAEQQSQLEALLARRKTGEPVAHLVCEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA            +ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSAATLIPRPDTECLVEQALARL-----PAQPCQILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD+   A+ +A+ N    G+      LQS WF+++E   F++IVSNPPYI+     
Sbjct: 135 TVTAVDVMPDAVALARRNVERLGL-NNVSVLQSSWFAALESRMFEMIVSNPPYIDEDDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     +HL   G   VE G+ Q   V  +F  
Sbjct: 194 LAQGDVR-FEPLTALVAANQGLADLDHIVTTSRQHLLPGGWLLVEHGWTQGEAVRALFTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYAAVETCRDYGGNERLTLGQ 274


>gi|261340149|ref|ZP_05968007.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317664|gb|EFC56602.1| protein-(glutamine-N5) methyltransferase [Enterobacter cancerogenus
           ATCC 35316]
          Length = 276

 Score =  291 bits (746), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q   L+  + R    E +  ++G R+F++
Sbjct: 20  PKRDAEILLEHVTGKTRTWLLAFGETALTAEQEAALSALLARRKTGEPVAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA             ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSAATLIPRPDTECLVEQALARL-----PEQSTAILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD+   A+ +A+ N    G+      LQS WFS++E   F +IVSNPPYI+     
Sbjct: 135 SVTAVDLMPDAVALAQRNVQRLGLC-NVTVLQSRWFSALEARSFGMIVSNPPYIDENDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +GL+    I     +HL   G   VE G+ Q   V  +F  
Sbjct: 194 LAQGDVR-FEPRTALVASGEGLADLDHIVTTSRQHLLHGGWLLVEHGWTQGEAVRDLFTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYTGVETCRDYGGNERLTLGQ 274


>gi|229844231|ref|ZP_04464372.1| HemK [Haemophilus influenzae 6P18H1]
 gi|229813225|gb|EEP48913.1| HemK [Haemophilus influenzae 6P18H1]
          Length = 292

 Score =  291 bits (745), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 99/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGQFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|254509163|ref|ZP_05121262.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus 16]
 gi|219547914|gb|EED24940.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio parahaemolyticus 16]
          Length = 286

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +LD  Q     + + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHALDKPRSFLLTWPDKLLDAEQLAQFASLLERRLGGEPVAYIVGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LDVAPSTLIPRPDTERLVEIALDKA-----SDSEGDILDLGTGTGAIALALASELPNRRV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182
            GVD+   A ++A SNA    +    +     WF  +E    F +IVSNPPYIE      
Sbjct: 143 WGVDLKEDARQLASSNAKKLNIP-NCEFRSGSWFDPIESGTQFALIVSNPPYIEKSDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  + I++    HL   G    E GY+Q + V  +  S 
Sbjct: 202 SQGDVR-FEPLSALVAEDNGLADIKYISEVARSHLQPGGWLMFEHGYDQGIAVRDLLASL 260

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V  FKDYG NDRV + 
Sbjct: 261 GYDQVETFKDYGNNDRVTIG 280


>gi|145642041|ref|ZP_01797612.1| HemK [Haemophilus influenzae R3021]
 gi|145273221|gb|EDK13096.1| HemK [Haemophilus influenzae 22.4-21]
          Length = 292

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 100/270 (37%), Positives = 150/270 (55%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELE 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288


>gi|313905738|ref|ZP_07839098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium cellulosolvens 6]
 gi|313469445|gb|EFR64787.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eubacterium cellulosolvens 6]
          Length = 282

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 90/264 (34%), Positives = 131/264 (49%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L    G++     +  +  +D+         + R L H  +  I G   F 
Sbjct: 26  DAKTDAWLLLEYAAGITRSFYTLHMNDPMDNSVAEAYEQYLQRRLGHLPVQHITGEAWFC 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D   PR +TE+LV+ AL    P       +RILD+ TG+G + L+LLK    
Sbjct: 86  GYSFYVTEDVLIPRQDTEVLVEEALRVLRP------GMRILDMCTGSGCILLSLLKGR-E 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             G  VD+S  AL +A+ N    G++ ++   L SD F  VEG +D+IV+NPPYI + + 
Sbjct: 139 VTGTAVDLSPAALAVAEENRKRLGIAEDQVKFLHSDLFEKVEGCYDMIVTNPPYIPTEVC 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD +P ++LDG  DGL   R IA+    +L KD +  +EIGY+Q   +  I  
Sbjct: 199 QELDPEVRDHEPMMALDGREDGLYFERKIAEDAKAYLKKDAMIFMEIGYDQGDAMREILL 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           S     V   +D GGNDRV    R
Sbjct: 259 SLGYKDVRIVRDLGGNDRVACGRR 282


>gi|206891037|ref|YP_002248217.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206742975|gb|ACI22032.1| HemK family protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 279

 Score =  291 bits (745), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 135/262 (51%), Gaps = 5/262 (1%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           +R++   +C V  +   Q+  + +  +   Q   + + I R LK E +  I+G   FYN+
Sbjct: 18  IREAQEIICHVLKIDKIQLYTE-NPEITSEQAHTIKSLIERRLKKEPLQYIIGECYFYNI 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           ++ +      PRPETE+LV+  L     ++      RILDL TG+G + LA+ K +P F+
Sbjct: 77  KIKVGRGVLIPRPETEILVEQVLE--RQKLISNTGNRILDLCTGSGCIALAIGKNAPEFQ 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
             G+D S KA++ A  N   N +      L  D F+  +   F  I +NPPY+++  +  
Sbjct: 135 IFGIDKSEKAVKYATENKALNNIK-NVIFLVGDMFNPFKEKIFACITANPPYVKTDEISK 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E+++++P  +L+GG DGL+ YR I +   ++L   GL  +EIG  Q   V  I    
Sbjct: 194 LQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQAKAVQNIALMS 253

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
              ++   KD  G DRV++  +
Sbjct: 254 GFNVIEVVKDIAGIDRVMILQK 275


>gi|146311982|ref|YP_001177056.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter sp. 638]
 gi|145318858|gb|ABP61005.1| [protein release factor]-glutamine N5-methyltransferase
           [Enterobacter sp. 638]
          Length = 276

 Score =  291 bits (745), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q   L++ + R    E +  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKARTYLLAFGETELTADQHAQLSDLLSRRKAGEPVAHLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSAATLIPRPDTECLVEHALARL-----PATACRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  N    G        QS WF ++ G  F++IVSNPPYI+     
Sbjct: 135 QITAVDVMPDAVALALRNVARLGF-NNVKIQQSSWFDALVGQQFEMIVSNPPYIDERDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+    I     +HL   G   +E G+ Q   V  +F  
Sbjct: 194 LSQGDVR-FEPLTALVAAEEGLADIAHIVTVSRQHLTAGGWLLIEHGWTQGEAVRALFTH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGNDR+ L  
Sbjct: 253 AGYERVETCQDYGGNDRLTLGR 274


>gi|13472969|ref|NP_104536.1| protoporphyrinogen oxidase, hemK protein [Mesorhizobium loti
           MAFF303099]
 gi|18202648|sp|Q98G94|HEMK_RHILO RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MloHemKP
 gi|14023717|dbj|BAB50322.1| protoporphyrinogen oxidase; HemK [Mesorhizobium loti MAFF303099]
          Length = 290

 Score =  290 bits (744), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 118/262 (45%), Positives = 157/262 (59%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +   +G +  Q I DP+  +D      +  A+ R    E +HRILG+R+FY
Sbjct: 27  DPALDARLIVEHFSGTTRTQAIADPERTIDSNAIAAIDAALGRRAGGEPVHRILGYREFY 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL+LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P 
Sbjct: 87  GLRLSLSPETLEPRPDTETLVEAVLPFVKAMAAREGTCRILDLGTGTGAIALALLSAVPA 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               GVDIS  AL  A  NA   G+  RF T+QSDWF  V G + VI +NPPYI +  + 
Sbjct: 147 ATATGVDISAGALATAARNAGELGLGGRFTTVQSDWFEKVSGRYHVIAANPPYIPTRDIG 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRDFDPR++LDGG+DGL+ YR IA   +R L  +   +VEIG+ Q+ +V  IF++
Sbjct: 207 NLQDEVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAESRIAVEIGHTQRDEVTDIFKA 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V A +D GGNDRVL+F 
Sbjct: 267 AGYASVAALRDLGGNDRVLVFQ 288


>gi|319781346|ref|YP_004140822.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167234|gb|ADV10772.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 290

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 117/263 (44%), Positives = 157/263 (59%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +   +G +  Q I DP+  +       +  A+ R    E +HRILG+R+FY
Sbjct: 25  DPALDARLIVEHFSGTTRTQAIADPERRVGAGAVAEIDAALRRRAGGEPVHRILGYREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL+LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P 
Sbjct: 85  GLRLSLSPETLEPRPDTETLVEAILPFVKAVATQEGECRILDLGTGTGAIALALLSVVPT 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               GVD+S  AL  A  NA   G++ RF  LQSDWF  V G + VIV+NPPYI S  + 
Sbjct: 145 ANATGVDLSAGALATAARNAGQLGLAGRFTALQSDWFEKVSGRYHVIVANPPYISSEDIG 204

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV +FDPR++LDGG DGL+ YRTIA   +R L  +G  +VEIG+ Q+ +V  IF +
Sbjct: 205 NLQDEVLNFDPRLALDGGADGLNPYRTIAAEAARFLEIEGRIAVEIGHTQRNEVCEIFTA 264

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                 + F+D GGNDRV++F R
Sbjct: 265 AGYVPGSVFRDLGGNDRVIVFER 287


>gi|90022890|ref|YP_528717.1| protein methyltransferase hemK [Saccharophagus degradans 2-40]
 gi|89952490|gb|ABD82505.1| modification methylase, HemK family [Saccharophagus degradans 2-40]
          Length = 288

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 131/263 (49%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L  V   +   +    D +    Q       + +  +   I  + G ++F++
Sbjct: 25  SRLDAEVLLAFVMQKNRTWLYTWSDKIPSPDQLQQFNQLVSQRQQGTPIAYLTGEKEFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSA--LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + L +S  T  PR +TE+LV+ A  LA +L +   ++ +RILDLGTGTGA+ LAL  E P
Sbjct: 85  LPLQVSPATLIPRGDTEILVEVALELAQTLQQKNPQEHIRILDLGTGTGAIALALASELP 144

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                 VD   +A+E+A+ N    G       L SDWFS++    F VIVSNPPYI+   
Sbjct: 145 TANITAVDKMPQAVELAEKNRAALGFK-NVTVLHSDWFSAITLQKFHVIVSNPPYIDEQD 203

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P  +L     GL+  + IA+   +HL  +G   VE G+ Q   V  +F
Sbjct: 204 PHLKQGDVR-FEPLTALVAPNQGLADIQHIAEHAKQHLLPNGFLCVEHGWQQAEAVRGVF 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      V + KD GGNDRV L 
Sbjct: 263 EKNGYVGVRSEKDNGGNDRVTLG 285


>gi|56413304|ref|YP_150379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197362229|ref|YP_002141866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56127561|gb|AAV77067.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093706|emb|CAR59178.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 277

 Score =  290 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRRQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIQ-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYTDVETCRDYGGNERVT 271


>gi|229826187|ref|ZP_04452256.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC
           49176]
 gi|229789057|gb|EEP25171.1| hypothetical protein GCWU000182_01559 [Abiotrophia defectiva ATCC
           49176]
          Length = 283

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L +V+GL+  +  +  D  +D+ +       I R  +   +  ++G RDF 
Sbjct: 26  EAELDARYILEKVSGLNRAEYFLHSDDKIDNDKTEEFLRLIERRSERIPLSYVIGTRDFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ +   P  ETELL +  +              +LD+ TG+G + +++      
Sbjct: 86  GLTFKVNENVLIPEQETELLAEEVIKHC-------KGKTVLDMCTGSGCIAISVSLLGEP 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    DIS KALE+AK NA     S     ++ D F ++ G FD+IVSNPPYIE+ +++
Sbjct: 139 SEVTASDISDKALEVAKENAEFLNAS-TVKFIKGDLFENITGSFDIIVSNPPYIETRVIE 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRD+ PR++LDG  DGL  Y+ I     ++LNK+     EIGYNQ   V  I   
Sbjct: 198 ELEPEVRDYIPRLALDGDEDGLKFYKNITKKAIKYLNKNARIFYEIGYNQSEAVTDILLE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   KDY G DR++  
Sbjct: 258 NGFEEIKIIKDYSGLDRIVTA 278


>gi|237731779|ref|ZP_04562260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
 gi|226907318|gb|EEH93236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
          Length = 277

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L + QR  L   + R  + E +  + G R+F++
Sbjct: 20  PRRDAEILLEFVTGKGRTFILAFGETELTEAQRQQLDTLLERRQRGEPVAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PASACRILDLGTGTGAIALALATERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD    A+ +A  N    G+      LQS+WFS+++G  FD+IVSNPPYI+     
Sbjct: 135 AVTAVDRMPDAVALAIRNKQQLGI-NNVCVLQSNWFSALQGQQFDMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I D   R L   G   +E G+ Q   V   F  
Sbjct: 194 LAQGDVR-FEPLSALVAGDQGLADIVHIIDQSLRMLTPGGYLLLEHGWQQGEAVRDAFTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYLAVETCRDYGGNERITLGR 274


>gi|16273459|ref|NP_439708.1| hypothetical protein HI1559 [Haemophilus influenzae Rd KW20]
 gi|260580340|ref|ZP_05848169.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae RdAW]
 gi|1170230|sp|P45253|HEMK_HAEIN RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.HindHemKP
 gi|1574403|gb|AAC23208.1| hemK protein (hemK) [Haemophilus influenzae Rd KW20]
 gi|260093017|gb|EEW76951.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae RdAW]
          Length = 292

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 149/270 (55%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DY  N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYSDNERVTLG 288


>gi|253688499|ref|YP_003017689.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755077|gb|ACT13153.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 281

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L   ++  L   + R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKRRTFLLAFGETALSAAEQQQLAELLARREQGEPIAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ AL         +    +LDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSPATLIPRPDTECLVEQALLRL-----PQKPCAVLDLGTGTGAIALALASERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD+   A+ +A  NA   G+ +    L   W+S ++   F +I SNPPYI++  + 
Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGL-DNAHFLSGSWYSPLDQTRFALIASNPPYIDADDMH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  RTI +    +L   G   +E G+ Q   V ++ ++
Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLAAGGWLLLEHGWQQADAVRQLLQA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    +   +DYGGNDRV L  
Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274


>gi|167553920|ref|ZP_02347663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|168462749|ref|ZP_02696680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633874|gb|EDX52226.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|205321752|gb|EDZ09591.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 277

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYTDVETCRDYGGNERVT 271


>gi|227111331|ref|ZP_03824987.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 281

 Score =  290 bits (743), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   ++ L+  ++  LT  ++R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRTFLLAFGETELNTAEQQQLTELLLRREQGEPIAYLIGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL         +    +LDLGTGTGA+ LAL  E    
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCAVLDLGTGTGAIALALASERHDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD+   A+ +A  NA   G+      L   W+S ++   F +I SNPPYI++  V 
Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGLG-NVHFLSGSWYSPLDHTRFALIASNPPYIDADDVH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  RTI +    +L+ DG   +E G+ Q   V ++  +
Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDDGWLLLEHGWQQADAVRQLLHA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    +   +DYGGNDRV L  
Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274


>gi|16765116|ref|NP_460731.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|62180339|ref|YP_216756.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|161613729|ref|YP_001587694.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|167993218|ref|ZP_02574313.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168237829|ref|ZP_02662887.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168820513|ref|ZP_02832513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|194443667|ref|YP_002041025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194735200|ref|YP_002114805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197265643|ref|ZP_03165717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|198245434|ref|YP_002215370.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|207856718|ref|YP_002243369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|224583735|ref|YP_002637533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|17865746|sp|P40816|HEMK_SALTY RecName: Full=Protein methyltransferase hemK; AltName:
           Full=M.StyLTHemKP; AltName:
           Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
           Full=Protein-glutamine N-methyltransferase hemK
 gi|16420305|gb|AAL20690.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|62127972|gb|AAX65675.1| putative protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161363093|gb|ABX66861.1| hypothetical protein SPAB_01454 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402330|gb|ACF62552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194710702|gb|ACF89923.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197243898|gb|EDY26518.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197289229|gb|EDY28596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|197939950|gb|ACH77283.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205328672|gb|EDZ15436.1| protein methyltransferase HemK [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205342641|gb|EDZ29405.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|206708521|emb|CAR32842.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224468262|gb|ACN46092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|261246961|emb|CBG24778.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267993723|gb|ACY88608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158299|emb|CBW17798.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312912764|dbj|BAJ36738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320085724|emb|CBY95502.1| possible protoporphyrinogen oxidase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321224403|gb|EFX49466.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322616771|gb|EFY13679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322620419|gb|EFY17285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322625679|gb|EFY22498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322626129|gb|EFY22939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322633736|gb|EFY30476.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322638890|gb|EFY35583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322640873|gb|EFY37522.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322644094|gb|EFY40639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322649165|gb|EFY45603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322655324|gb|EFY51632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322660918|gb|EFY57149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322662785|gb|EFY58992.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322667969|gb|EFY64128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322674269|gb|EFY70363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322678550|gb|EFY74608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322683209|gb|EFY79225.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322686903|gb|EFY82881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|322714813|gb|EFZ06384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323130045|gb|ADX17475.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|323195207|gb|EFZ80387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323200202|gb|EFZ85288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323204530|gb|EFZ89534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323207353|gb|EFZ92301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323213948|gb|EFZ98717.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323217338|gb|EGA02057.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323228021|gb|EGA12166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323231360|gb|EGA15473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323235800|gb|EGA19879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323240369|gb|EGA24412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323245261|gb|EGA29261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323249066|gb|EGA32986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323252823|gb|EGA36659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323254892|gb|EGA38686.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323266734|gb|EGA50220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323268941|gb|EGA52397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|326623116|gb|EGE29461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|332988662|gb|AEF07645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 277

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|109898877|ref|YP_662132.1| HemK family modification methylase [Pseudoalteromonas atlantica
           T6c]
 gi|109701158|gb|ABG41078.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudoalteromonas atlantica T6c]
          Length = 298

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/272 (33%), Positives = 134/272 (49%), Gaps = 18/272 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   +C V    +  ++  P+  LD+ Q       + +      I  +LG+RDF++
Sbjct: 30  AALDSRLLMCHVLQCETAYLMTWPEKPLDELQLRTYQQLVAKRKTGYPIAYLLGYRDFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +S  T  PRPETELLV++ L      +   +   +LDLGTGTGA+ LAL  E P +
Sbjct: 90  LRLRVSPATLIPRPETELLVETVL-----NLPIAEDAHVLDLGTGTGAIALALASEKPNW 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----------FDVIVSN 171
           + +G+D S  A+ +AK NA  N +  +   +QSDWFS++E             F +IVSN
Sbjct: 145 QVLGIDKSADAVALAKQNAELNSLP-QVRFMQSDWFSALEQTQLDQQNNQHNVFSLIVSN 203

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+E   V     +VR F+P  +L  G DGL   R I       L   G  + E GY Q
Sbjct: 204 PPYVEDDSVYLQQGDVR-FEPASALTSGKDGLDDIRIIISKAITFLPSGGWLAFEHGYQQ 262

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              V  +  +     V++  D     R+ L C
Sbjct: 263 AQGVQALLVNNGFEQVHSVNDLNDLPRITLGC 294


>gi|283785499|ref|YP_003365364.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Citrobacter rodentium ICC168]
 gi|282948953|emb|CBG88556.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Citrobacter rodentium ICC168]
          Length = 278

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L D Q+  L   + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEFVTGKTRTWILAFGETALTDTQQQQLATLLARRRRGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PASPCRILDLGTGTGAIALALATERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
               VD    A+ +A+ NA    +      LQSDWFS+V+G  FD+IVSNPPYI+     
Sbjct: 135 VITAVDRMPDAVALAQRNAAHLAIG-NVRILQSDWFSAVKGEQFDMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  G++    I       L+  G   +E G+ Q   V   F  
Sbjct: 194 LAEGDVR-FEPLSALVAGDHGMADIVQIIAQARDFLSAGGFLLLEHGWQQGAAVREAFSR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYQAVATCRDYGDNERITLGR 274


>gi|149192360|ref|ZP_01870563.1| HemK protein [Vibrio shilonii AK1]
 gi|148833799|gb|EDL50833.1| HemK protein [Vibrio shilonii AK1]
          Length = 284

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V       ++  P+  L   +       + R +  E +  ILG R+F+++ 
Sbjct: 28  LDAAVLLCHVLEKPRSYLLTWPEKALTSNEAEQFEALLNRRIAGEPVAYILGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE LV+ AL  +L      +   ILDLGTGTGA+ LAL  E      
Sbjct: 88  LNVAPSTLIPRPDTERLVELALDKALV-----NDGDILDLGTGTGAIALALASELKTRSV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDC 182
           +GVD   +A+E+A+SNA    ++      Q  WF  V+    F VIVSNPPYI+      
Sbjct: 143 MGVDFQTEAVELARSNATKLNIT-NCQFAQGSWFEPVDLVHKFSVIVSNPPYIDENDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+   TI      HL + G    E G+ Q   V  I  + 
Sbjct: 202 SQGDVR-FEPSTALVAENNGLADIETITAKAPTHLLEGGWLLFEHGFEQGQAVREILVNN 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   +DY GNDRV L  
Sbjct: 261 GFCHVVTEQDYAGNDRVTLGQ 281


>gi|153948102|ref|YP_001401038.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 31758]
 gi|152959597|gb|ABS47058.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
           31758]
          Length = 276

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ +   Q  +L     R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLSFVTGKARTYLLAFGETEITAEQLLWLETLANRREQGEPIAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSSATLIPRPDTECLVEQALARL-----PSMPCRILDLGTGTGAIALALASERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + VDI+  A+ +A+ NA    + +    LQ  WF  V G F +I SNPPYI++     
Sbjct: 135 AVIAVDINADAVALARHNAKKLAI-DNVCFLQGSWFEPVSGRFALIASNPPYIDANDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR ++P   L    +G++    I      +L   G   +E G+ Q   V    ++ 
Sbjct: 194 NEGDVR-YEPHSVLVAAAEGMADLAAIVSQAPGYLEPGGWLMLEHGWQQANAVQERLKNS 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYG NDRV L  
Sbjct: 253 GFSAVMTCKDYGNNDRVTLGQ 273


>gi|260914190|ref|ZP_05920663.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325]
 gi|260631823|gb|EEX50001.1| protein methyltransferase HemK [Pasteurella dagmatis ATCC 43325]
          Length = 308

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 91/272 (33%), Positives = 132/272 (48%), Gaps = 16/272 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  VT  +   ++  P++ L   +   L   + R  K E I  ILG ++F+
Sbjct: 34  DAKIDAMVLLSEVTQKTRAYILAFPETHLSADKLKQLEKYLTRRAKGEPIAYILGEKEFW 93

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLALLKE 118
           ++ L +S  T  PRP+TE+LV+ AL  +  R+        + ILDLGTGTGA+ LAL  E
Sbjct: 94  SLPLKVSKHTLIPRPDTEILVEQALEIAKQRLNSSYFSGELTILDLGTGTGAIALALASE 153

Query: 119 SP--------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVI 168
                         + VD   +A+E+A+ NA  N +      LQS WF +++    FDVI
Sbjct: 154 LKMLTQKCGANLNILAVDRIAEAVELARENAKYNHLE--VTFLQSSWFDALDPSIKFDVI 211

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI+         +VR F+P  +L    +G +  R I +   + L   G   +E G
Sbjct: 212 VSNPPYIDEKDSHLTQGDVR-FEPLSALVAEEEGYADLRHIIEQAPQFLKPQGYLLLEHG 270

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + Q   V  IF       V   KDYG N+RV 
Sbjct: 271 WLQGEKVRSIFTENNWQQVQTLKDYGNNERVT 302


>gi|319776410|ref|YP_004138898.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3047]
 gi|329123574|ref|ZP_08252136.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116]
 gi|317451001|emb|CBY87231.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae F3047]
 gi|327470316|gb|EGF15776.1| protein methyltransferase HemK [Haemophilus aegyptius ATCC 11116]
          Length = 292

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 95/270 (35%), Positives = 145/270 (53%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+      ILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFCILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SN   N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKQHIPLEIIGVDLMPDVVALAQSNTERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +V  F+P  +L    +G +  R I +    +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDV-SFEPLSALVANDEGYADLRHIIELAPSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|168233806|ref|ZP_02658864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194470184|ref|ZP_03076168.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194456548|gb|EDX45387.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205332122|gb|EDZ18886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 277

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PLKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|323261019|gb|EGA44614.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
          Length = 292

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|168260000|ref|ZP_02681973.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|205350947|gb|EDZ37578.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
          Length = 277

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 FGYTDVETCRDYGGNERVT 271


>gi|197249709|ref|YP_002146254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197213412|gb|ACH50809.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 277

 Score =  290 bits (742), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALAQL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYMDVETCRDYGGNERVT 271


>gi|204927633|ref|ZP_03218834.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|204322975|gb|EDZ08171.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
          Length = 277

 Score =  289 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLAELLQRRRQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWQQGEAVRAFFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|258621066|ref|ZP_05716100.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586454|gb|EEW11169.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 286

 Score =  289 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 128/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L++     L   + R +  E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPVAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A+E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 RVTGIDLRPEAVELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY GNDRV L  
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279


>gi|262404523|ref|ZP_06081078.1| Polypeptide chain release factor methylase [Vibrio sp. RC586]
 gi|262349555|gb|EEY98693.1| Polypeptide chain release factor methylase [Vibrio sp. RC586]
          Length = 286

 Score =  289 bits (741), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 127/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L++     L   + R +  E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEESALVSLNALLARRITGEPVAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS + G   F +IVSNPPYIE    
Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLAGGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPHFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY GNDRV L  
Sbjct: 257 DLGYQSVTTEQDYAGNDRVTLGQ 279


>gi|68249926|ref|YP_249038.1| hypothetical protein NTHI1574 [Haemophilus influenzae 86-028NP]
 gi|145631801|ref|ZP_01787561.1| HemK [Haemophilus influenzae R3021]
 gi|68058125|gb|AAX88378.1| HemK [Haemophilus influenzae 86-028NP]
 gi|144982591|gb|EDJ90141.1| HemK [Haemophilus influenzae R3021]
          Length = 292

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELE 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L     G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DY  N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYSDNERVTLG 288


>gi|218708756|ref|YP_002416377.1| hypothetical protein VS_0753 [Vibrio splendidus LGP32]
 gi|218321775|emb|CAV17731.1| Protein hemK homolog [Vibrio splendidus LGP32]
          Length = 290

 Score =  289 bits (741), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 87/266 (32%), Positives = 124/266 (46%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DATVLLCHALDKPRSYLLTWPEKHLTSEQESEFNTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177
           G+D+  +A ++A  NA    ++     L   WF  +           F +IVSNPPYIE 
Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEK 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q + V  
Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGLAVRE 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           I ++     V   KDYGGNDRV L  
Sbjct: 262 IMQALGYLDVVTEKDYGGNDRVTLGR 287


>gi|284047801|ref|YP_003398140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidaminococcus fermentans DSM 20731]
 gi|283952022|gb|ADB46825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidaminococcus fermentans DSM 20731]
          Length = 302

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 98/265 (36%), Positives = 140/265 (52%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   LC V   S  Q+  + D  L++++       + R    E +  ILG + F 
Sbjct: 28  NPRLDAEVLLCAVLDKSRIQLYTNFDEPLEEQELKQYRGYVARRAAREPVAYILGHKGFL 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ DT  PRPETELLV+  ++ +  R      VRILDLG G+GA+  +LL E P 
Sbjct: 88  QYDFKVTKDTLIPRPETELLVEQLVSLNRDR----GPVRILDLGCGSGAIIDSLLAELPE 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +G+GVDIS  A  + + NA + GV +R +T+ SD +  V  E  F V+VSNPPYI    
Sbjct: 144 ARGMGVDISPGAAAVTRENAQSLGVGDRLETVVSDLYEKVPREEKFQVLVSNPPYIPEGD 203

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EV   +PR +LDGG DGL  YR I   +  +L+ +G+ + EIG  Q  DV R+ 
Sbjct: 204 LAGLQAEVHR-EPRRALDGGRDGLDFYRRILRDLWSYLDPEGMAAFEIGQGQGEDVARLC 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               L  V   KDYG  DR++   +
Sbjct: 263 REAGLDCVKVRKDYGDMDRMVFAAK 287


>gi|84394466|ref|ZP_00993180.1| HemK protein [Vibrio splendidus 12B01]
 gi|84374907|gb|EAP91840.1| HemK protein [Vibrio splendidus 12B01]
          Length = 290

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 87/266 (32%), Positives = 123/266 (46%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177
           G+D+  +A ++A  NA    ++     L   WF  +           F +IVSNPPYIE 
Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSASSEEEAVKFSLIVSNPPYIEK 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q + V  
Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARDFLENEGWLAFEHGYDQGLAVRE 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           I +      V   KDYGGNDRV L  
Sbjct: 262 IMQQLGYLDVVTEKDYGGNDRVTLGR 287


>gi|320102130|ref|YP_004177721.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Isosphaera pallida ATCC 43644]
 gi|319749412|gb|ADV61172.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Isosphaera pallida ATCC 43644]
          Length = 319

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 145/264 (54%), Gaps = 3/264 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V   + +Q+ +  D V+ D  R    + + R  + E    ++G ++FY 
Sbjct: 53  PRLEAEVLLAHVLDHARYQLYMHIDDVVSDAARSAFRDLVKRRSEGEPSAYLVGRKEFYA 112

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP++E LV  AL  +L ++  R+  R+ D+GTG+G + +A+ + SP  
Sbjct: 113 LSFKVTPAVLIPRPDSEFLVIEALE-ALGKMVGRETPRLADVGTGSGCLAVAVARRSPQV 171

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           + V +D S +AL +A+ NA  +GV++R D  + D F  +  E  FD+IVSNPPY+ + + 
Sbjct: 172 RIVAIDRSAEALAVARENAQAHGVADRIDFCEGDLFEPLDPEDRFDLIVSNPPYVATPVW 231

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L   +++F+PR++LDGGIDGL   R + D  +  L+  G  ++EIG +Q   V R+F 
Sbjct: 232 ETLEPTIKNFEPRLALDGGIDGLDVIRRLVDQAAVRLHPGGTLAMEIGSDQGEAVTRLFA 291

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                     +D+ G DRV+   R
Sbjct: 292 GDLWSPPTIRRDHAGLDRVVTTRR 315


>gi|200389878|ref|ZP_03216489.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|199602323|gb|EDZ00869.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
          Length = 277

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|302671178|ref|YP_003831138.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316]
 gi|302395651|gb|ADL34556.1| methyltransferase HemK [Butyrivibrio proteoclasticus B316]
          Length = 287

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 91/244 (37%), Positives = 133/244 (54%), Gaps = 7/244 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  V G     ++  PD  + D +R    + I R   HE +  ILG  +F 
Sbjct: 23  EAKLDARLLLEYVCGTDHSTLLAHPDKEVTDEERDKYLSMIDRRAAHEPVAYILGTWNFM 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++SD   P  +TE+LV+ AL          D +R+LDL TG+G + L+LL  +  
Sbjct: 83  GLDFKVNSDVLIPEQDTEILVEEALRNL------EDGMRVLDLCTGSGCIALSLLNYTNE 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
            + V  DIS KAL +A  NA   G+S+R + +++D F     G FD+IVSNPPYI S ++
Sbjct: 137 TRAVCTDISDKALAVAGMNAERLGLSDRTEFVRTDLFPEESVGKFDLIVSNPPYIASKVI 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVRD++PR++LDG  DGL  YR I +   + L   G   +EIGY+Q   V  + E
Sbjct: 197 DTLAPEVRDYEPRLALDGSEDGLVFYRRIIEETPKFLYSSGYLLLEIGYDQGQAVKEMLE 256

Query: 241 SRKL 244
            +K 
Sbjct: 257 DKKY 260


>gi|302381613|ref|YP_003817436.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302192241|gb|ADK99812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 294

 Score =  289 bits (740), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 97/256 (37%), Positives = 144/256 (56%), Gaps = 5/256 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   +G S   ++ DP   L   Q+  L   + R L+ E + RILG + F+ + L
Sbjct: 29  DARLLLEAASGASRLDILTDPHRPLTPDQQAALAGYLERRLRREPVSRILGRKGFWKIML 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+T    ++ L  ++   E      ++DLGTG+GA+ LA+L E P   GV
Sbjct: 89  NVTPDVLSPRPDT----ETILDVAMLAFEPAQAFNVIDLGTGSGAILLAVLSERPGSHGV 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G DIS +AL +A+ NA   G+  R   L+++W +   +  FD++VSNPPYI S  +  L 
Sbjct: 145 GTDISSEALAVARENAANLGLDGRATFLRTEWAAGFGDASFDLVVSNPPYIPSGDIPGLD 204

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP ++LDGG DGL  YR +A  ++R L   G+ +VEIG++Q   V  +FE+  L
Sbjct: 205 PEVRDHDPVLALDGGPDGLQAYRDLAPEIARILKPGGVFAVEIGWDQGPQVKALFEAAGL 264

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD G   RV+
Sbjct: 265 TDVKVVKDLGDRHRVV 280


>gi|50121118|ref|YP_050285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49611644|emb|CAG75093.1| protein methyltransferase [Pectobacterium atrosepticum SCRI1043]
          Length = 281

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   ++ L   ++  LT  + R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRTFLLAFGETELSAAEQQPLTELLARREQGEPIAYLIGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL         +    +LDLGTGTGA+ LAL  E    
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCSVLDLGTGTGAIALALASERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +GVD+   A+ +A  NA    + +    L   W+S +E   F +IVSNPPYI+   V 
Sbjct: 135 RVIGVDLQPDAVALATKNAQQLKL-DNARFLPGSWYSPLEHMRFALIVSNPPYIDVDDVH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  R I +    +L+  G   +E G+ Q   V R+ + 
Sbjct: 194 LAQGDVR-FEPASALIAADNGLADLRAIIESAPHYLDAGGWLLLEHGWQQGDAVRRLLQV 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    +  ++DYGGNDRV L  
Sbjct: 253 RGFTQIETYQDYGGNDRVSLGR 274


>gi|260467161|ref|ZP_05813339.1| modification methylase, HemK family [Mesorhizobium opportunistum
           WSM2075]
 gi|259029085|gb|EEW30383.1| modification methylase, HemK family [Mesorhizobium opportunistum
           WSM2075]
          Length = 292

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 123/263 (46%), Positives = 158/263 (60%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +   +G +  Q I DP+  +  R    +  A+ R    E +HRILG+R+FY
Sbjct: 27  DPTLDARLIVEHFSGTTRTQAIADPEFKVHGRAIETIDAALRRRAGGEPVHRILGYREFY 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL+LS +T EPRP+TE LV++ L F      +    RILDLGTGTGA+ LALL   P 
Sbjct: 87  GLRLSLSPETLEPRPDTETLVEAILPFVKAIAAREGACRILDLGTGTGAIALALLSAEPA 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               GVDI+  AL  A  NA   G+  RF  LQSDWF  V G + VI +NPPYI S  + 
Sbjct: 147 ATATGVDIAPGALATATGNAGQLGLGGRFTALQSDWFEKVSGRYHVIAANPPYIPSQDIG 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRDFDPR++LDGG+DGL+ YR IA   +R L  +G  +VEIG  Q+ +V  IF S
Sbjct: 207 NLQDEVRDFDPRLALDGGVDGLNPYRIIAAEAARFLEAEGRVAVEIGRTQQDEVTDIFRS 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
               LV AF+D GGNDRVL+F R
Sbjct: 267 AGYGLVGAFRDLGGNDRVLVFQR 289


>gi|262166265|ref|ZP_06034002.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223]
 gi|262025981|gb|EEY44649.1| Polypeptide chain release factor methylase [Vibrio mimicus VM223]
          Length = 286

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 128/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L++     L + + R +  E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNSLLTRRMAGEPVAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNQGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY GNDRV L  
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279


>gi|157145533|ref|YP_001452852.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter koseri ATCC BAA-895]
 gi|157082738|gb|ABV12416.1| hypothetical protein CKO_01276 [Citrobacter koseri ATCC BAA-895]
          Length = 277

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L D QR  L   + R  + E +  + G R+F++
Sbjct: 20  PRRDAEILLGHVTGKARTFILAFGETALTDTQREQLAQLLARRQRGEPVAHLTGIREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PDSPCRILDLGTGTGAIALALATERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQSDWF+++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAGRNAQHLAI-HNVRILQSDWFAALPGQQFDMIVSNPPYIDAHDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +G++    I       L   G   +E G+ Q V V      
Sbjct: 194 LAQGDVR-FEPLSALVADDNGMADITHIIAQARHALAPGGYLLLEHGWQQGVAVRTALAQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYVQVETCRDYGDNERITLGR 274


>gi|242239291|ref|YP_002987472.1| modification methylase, HemK family [Dickeya dadantii Ech703]
 gi|242131348|gb|ACS85650.1| modification methylase, HemK family [Dickeya dadantii Ech703]
          Length = 279

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 91/261 (34%), Positives = 130/261 (49%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     +I   +++L D Q+  L   + R    E I  + G ++F++
Sbjct: 20  PRRDAEILLGHVTGKRRTFLIAFGETLLSDDQQQMLEGLLTRRSAGEPIAYLTGEKEFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL    P+      + +LDLGTGTGA+ LA+  E P  
Sbjct: 80  LALEVSPATLIPRPDTECLVEQALQRLPPQ-----ALSVLDLGTGTGAIALAIASERPAC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             +GVD    A+ +A  NA   G+      L  DWFSS+ E  F +IVSNPPYI++    
Sbjct: 135 DVLGVDCQPDAVTLATHNARRLGI-HNVRFLLGDWFSSLNEQRFSMIVSNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR ++P  +L  G  GL+  R I       L   G   +E G+ Q   V  +F  
Sbjct: 194 LNCGDVR-YEPASALVAGEHGLADLRHIVQYSRHFLLDGGWLLLEHGWLQGESVRELFWQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +DYGGN+RV L 
Sbjct: 253 YGFSQVETCRDYGGNERVSLG 273


>gi|238913675|ref|ZP_04657512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
          Length = 277

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 92/257 (35%), Positives = 131/257 (50%), Gaps = 8/257 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F+++ 
Sbjct: 22  RDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWSLP 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  + 
Sbjct: 82  LFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDCEV 136

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++      
Sbjct: 137 TAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLS 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F    
Sbjct: 196 EGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRRSG 254

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   +DYGGN+RV 
Sbjct: 255 YSDVETCRDYGGNERVT 271


>gi|148826785|ref|YP_001291538.1| hypothetical protein CGSHiGG_00160 [Haemophilus influenzae PittGG]
 gi|148718027|gb|ABQ99154.1| HemK [Haemophilus influenzae PittGG]
          Length = 292

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 99/270 (36%), Positives = 148/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288


>gi|312172220|emb|CBX80477.1| K02493 methyltransferase [Erwinia amylovora ATCC BAA-2158]
          Length = 295

 Score =  288 bits (739), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DSVLD      L   + R    E I  + G R+F++
Sbjct: 20  PKRDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ DT  PRP++E+LV+ ALA             ILDLGTG+GA+ LAL  E P  
Sbjct: 80  LSLNVTPDTLIPRPDSEVLVEQALAHL-----PDAACSILDLGTGSGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G+D    A+ +A+ NA   G++     +  +WFS+++   F VIVSNPPYI++    
Sbjct: 135 QISGIDRIPAAVALAQHNAARLGLA-NATFMPGNWFSALKPQQFAVIVSNPPYIDAADKH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I   
Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +DYGGNDRV    +
Sbjct: 253 NHYCRIETCQDYGGNDRVTFGQK 275


>gi|15893237|ref|NP_360951.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia conorii str. Malish 7]
 gi|229587214|ref|YP_002845715.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia africae ESF-5]
 gi|32129602|sp|Q92G13|HEMK_RICCN RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; AltName: Full=M.RcoHemKP;
           Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|15620455|gb|AAL03852.1| possible protoporphyrinogen oxidase [Rickettsia conorii str. Malish
           7]
 gi|228022264|gb|ACP53972.1| Methylase of polypeptide chain release factors [Rickettsia africae
           ESF-5]
          Length = 524

 Score =  288 bits (739), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 21/281 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------------------VRIL 102
               ++     PR +TE+LVD             +                     + IL
Sbjct: 84  REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPNPCFRGNDISENCNDKFLNIL 143

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +LGTG+G + ++LL E P    +  DIS  A++I KSNA    V++R   + S+WF ++E
Sbjct: 144 ELGTGSGCIAISLLCELPNANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD IVSNPPYI       + +E  +++P I+L    DGL  Y  IA+   + L  +G
Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +EIG+ Q+  V +IF      + + +KD  G+ RV+LF
Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILF 304


>gi|237807597|ref|YP_002892037.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
 gi|237499858|gb|ACQ92451.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
          Length = 282

 Score =  288 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 127/258 (49%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V   +   +   P+  L   Q   +    VR  + E +  ILG R+F++
Sbjct: 20  AALDADCLLCAVLSCTRTYLRTWPEQELTPEQVAQVEQFAVRREQGEPVAYILGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL       E+    + LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLQVSPATLIPRPDTEALVEWALTLL---SEQGQGQKALDLGTGTGAIALALKSEFPAL 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               ++    AL++A+ NA   G S  F  L S+WFS++    F +IVSNPPYI++    
Sbjct: 137 AMWALEREPAALDLARRNAARLGFSVNF--LASNWFSALNERNFQLIVSNPPYIDAADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    DGL+  R I D    +L   G   +E G+ Q   V  +  S
Sbjct: 195 LAQGDVR-FEPHSALVADEDGLADIRQIIDQAPEYLAAGGWLLLEHGWQQAEAVRDLLSS 253

Query: 242 RKLFLVNAFKDYGGNDRV 259
           R    V    D GG DRV
Sbjct: 254 RGFQAVTTKSDLGGQDRV 271


>gi|168241357|ref|ZP_02666289.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
 gi|194447419|ref|YP_002045818.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|194405723|gb|ACF65942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL476]
 gi|205339433|gb|EDZ26197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Salmonella enterica subsp. enterica serovar Heidelberg
           str. SL486]
          Length = 277

 Score =  288 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 FGYTDVETCRDYGGNERVT 271


>gi|270261429|ref|ZP_06189702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia odorifera 4Rx13]
 gi|270044913|gb|EFA18004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia odorifera 4Rx13]
          Length = 277

 Score =  288 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG +   ++   ++VL  +++  L   + R  + E +  ++G R+F++
Sbjct: 20  ARRDAEILLGFVTGRARTFLMAFGETVLTPQEQEQLERLLARRERGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ AL    P         ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLSVSPATLIPRPDTECLVELALERLPP-----SPCTILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
              GVD+  +A+ +A+ NA    +      LQ  WF  + G  F +I SNPPYI++    
Sbjct: 135 AVTGVDLQPEAVALAQHNAQKLAIG-NAQFLQGSWFEPLAGQTFVLIASNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I      +L   G   +E G+ Q   V  + ++
Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLAAIVQQAPHYLQPQGWLLLEHGWQQGESVRALLQA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG NDRV    
Sbjct: 253 AGFISVATRRDYGDNDRVTFGQ 274


>gi|20806671|ref|NP_621842.1| rRNA or tRNA methylase [Thermoanaerobacter tengcongensis MB4]
 gi|20515121|gb|AAM23446.1| predicted rRNA or tRNA methylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 285

 Score =  288 bits (738), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               +S   L     +   ++ +  D VL + +       I +         I+  + F 
Sbjct: 26  NPRLESELLLSHSLRIDRVKLAIKRDEVLKEEELERFLKYIEKRKSRIPYQYIVKKQHFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE+LV+ AL         +    ILD+GTG+GA+ +++ K  P 
Sbjct: 86  GFEFYVDERVLIPRPETEILVEEALKRM------KSGDLILDIGTGSGAIAISIAKLFPD 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            K   VD+S +ALE+AK NA   GV+E+   ++SD FS++     FD+IVSNPPYI+   
Sbjct: 140 CKVYAVDVSEEALEVAKYNAEKLGVAEKIIFIKSDIFSNIPQDVKFDLIVSNPPYIKKAE 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P ++LDGG DGL  Y+ I      +L K G    EIGY Q+ +V +IF
Sbjct: 200 LENLQEEVKK-EPILALDGGEDGLFFYKRIIPDCKFYLKKGGRGLFEIGYGQREEVEKIF 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  +   KD    DRV++  
Sbjct: 259 LENGFDEIEVIKDLAHIDRVIIGR 282


>gi|332532478|ref|ZP_08408356.1| methylase of polypeptide chain release factors [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038121|gb|EGI74568.1| methylase of polypeptide chain release factors [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 279

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +       +   P+  L D Q+      I R LK E +  I G R+F++
Sbjct: 23  AKLDAQVLLLHILQKPRSYLFTWPEHALSDEQQSQFNVFIQRRLKGEPVAHITGLREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE LV+ AL  +LP        ++LDLGTGTGA+ LAL  E P +
Sbjct: 83  LSLEVNATTLIPRPDTETLVEQALEIALPA-----TAKVLDLGTGTGAIALALGSEMPSW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  N     +       QS+WFS + G  F++IV+NPPYIES  + 
Sbjct: 138 QITAVDRVSDAVALATRNQQRLAI-NNVHVKQSNWFSELHGEKFNLIVTNPPYIESSDIH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G+S  + I      +L+ +G   +E G+ Q   V   FE 
Sbjct: 197 LNQGDVR-FEPLSALVADDCGMSDIKQIITQSRDYLSSNGYLLIEHGFEQGEAVRHFFEK 255

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +   KD G NDRV L 
Sbjct: 256 MAFVNIKTVKDLGNNDRVTLA 276


>gi|324113972|gb|EGC07946.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii
           B253]
          Length = 276

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPIAHLTGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  G++    I +     L K G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGTAVRQAFIQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYSNVETCRDYGGNERITLGR 274


>gi|261493249|ref|ZP_05989776.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261311099|gb|EEY12275.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 417

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++VL +R+   L   + R  K E +  ILG+R+F
Sbjct: 153 LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 212

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S  T  PRP+TE LV+ AL ++  R+E + +++ILDLGTGTGA+ LAL  E  
Sbjct: 213 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 272

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
              + +GVD   +A+++A+ N    G+  +   LQSDWFSS+    FD+IVSNPPYI+  
Sbjct: 273 EKAQIIGVDFQNEAVQLAEENRQHLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDEA 331

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I      +L   G   +E  + Q   V  +
Sbjct: 332 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 390

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F+      V   +DY GNDRV 
Sbjct: 391 FDLNLWEQVETAQDYAGNDRVT 412


>gi|218549097|ref|YP_002382888.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|218356638|emb|CAQ89264.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia fergusonii ATCC 35469]
 gi|325497512|gb|EGC95371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ECD227]
          Length = 276

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E +  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFILAFGETQLTDEQLQQLDALLARRRAGEPVAHLTGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  G++    I +     L K G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAGDHGMADIVHIIEHSRAALAKGGYLLLEHGWQQGAAVRQAFIQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYSNVETCRDYGGNERITLGR 274


>gi|323492376|ref|ZP_08097529.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
 gi|323313423|gb|EGA66534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
          Length = 286

 Score =  288 bits (737), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 126/261 (48%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +L   Q       + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHALDKPRSFLLTWPDKILPSSQLDAFQALLERRLSGEPVAYIVGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +L      +   ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPSTLIPRPDTERLVEIALDKAL-----NNQGDILDLGTGTGAIALALASELPQRQI 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
            GVD+  +A ++A+SNA    +      L   WF  ++    F +IVSNPPYIE      
Sbjct: 143 WGVDLKSEAQQLAQSNAKALKL-HNTRFLAGSWFEPIDDGTEFALIVSNPPYIEKEDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+  + IA     +L K G    E GY Q   V  +  S 
Sbjct: 202 TRGDVR-FEPLSALVADEKGLADIKHIATQARSYLAKQGWLMFEHGYEQGEAVRELLISL 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  +KDYG NDRV +  
Sbjct: 261 GYDQVATYKDYGDNDRVTIGQ 281


>gi|192359316|ref|YP_001981173.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107]
 gi|190685481|gb|ACE83159.1| methyltransferase, HemK family [Cellvibrio japonicus Ueda107]
          Length = 265

 Score =  288 bits (737), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    LC +   +   +   PD +L D         + R    E I  I+G R+F++
Sbjct: 5   PRLDIELILCHLLQKNRTWLYTWPDHLLADESLRQFETCLARRETGEPIAHIIGEREFWS 64

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE++V+  LA S        V R LDLGTGTGA+ LAL  E   +
Sbjct: 65  LPLLVNNSTLIPRPDTEVVVEQVLA-SFAEDAPTQVRRCLDLGTGTGAIALALANEKKHW 123

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + + VD S  A+ +A++N     +      L SDWFS++    FDVIVSNPPYI+     
Sbjct: 124 QVLAVDRSADAVALARTNVARLRLP-NVQVLCSDWFSAIPAQTFDVIVSNPPYIDPQDPH 182

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L  G  GL+    I +    +L   G   +E GY+Q   V  +F +
Sbjct: 183 LEQGDVR-FEPRSALVAGNAGLADIEAILEQAPAYLAVGGWLLIEHGYDQGRAVRNLFCA 241

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V+  +DY GN+RV    
Sbjct: 242 SGLVQVSTRRDYAGNERVTFGQ 263


>gi|34581095|ref|ZP_00142575.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246]
 gi|28262480|gb|EAA25984.1| possible protoporphyrinogen oxidase [Rickettsia sibirica 246]
          Length = 524

 Score =  288 bits (737), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 21/281 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------------------VRIL 102
               ++     PR +TE+LVD             +                     + IL
Sbjct: 84  REFIVNKHVLIPRSDTEVLVDVVFQCHSHESGNPEKKQPNPCFRGNDISENCNDKFLNIL 143

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +LGTG+G + ++LL E P    +  DIS  A++I KSNA    V++R   + S+WF ++E
Sbjct: 144 ELGTGSGCIAISLLCELPHANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD IVSNPPYI       + +E  +++P I+L    DGL  Y  IA+   + L  +G
Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +EIG+ Q+  V +IF      + + +KD  G+ RV+LF
Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILF 304


>gi|157829147|ref|YP_001495389.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933876|ref|YP_001650665.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. Iowa]
 gi|157801628|gb|ABV76881.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908963|gb|ABY73259.1| peptide release factor-glutamine N5-methyltransferase [Rickettsia
           rickettsii str. Iowa]
          Length = 524

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 21/281 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFS-----LPRIEKRDV---------------VRIL 102
               ++     PR +TE+LVD            P  ++ D                + IL
Sbjct: 84  REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPDPCFRGNDISKNCNDKFLNIL 143

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +LGTG+G + ++LL E P    V  DIS  A++I KSNA    V++R   + S+WF ++E
Sbjct: 144 ELGTGSGCIAISLLCELPNANVVATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD IVSNPPYI       + +E  +++P I+L    DGL  Y  IA+   + L  +G
Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +EIG+ Q+  V +IF      + + +KD  G+ RV+L 
Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILL 304


>gi|115375811|ref|ZP_01463063.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1]
 gi|310822928|ref|YP_003955286.1| hypothetical protein STAUR_5696 [Stigmatella aurantiaca DW4/3-1]
 gi|115367199|gb|EAU66182.1| methyltransferase, HemK family [Stigmatella aurantiaca DW4/3-1]
 gi|309396000|gb|ADO73459.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 292

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 83/259 (32%), Positives = 122/259 (47%), Gaps = 7/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +      ++ VD D  L   +       I R +  E    + G ++FYN    
Sbjct: 30  AEVLLAHLLKTGRVRLYVDLDRPLSKEELAAYRALIERRMAGEPTQYLTGAKEFYNRPFK 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETELLV++AL      + K      LD+  G+G + ++L  E P    + 
Sbjct: 90  VDARVLIPRPETELLVEAALR----ALPKDAPSHALDVCAGSGCIAISLAAERPQTSVLA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
            D+S  A  +A+ NA T GVS R   LQ D F+ V  +  F ++VSNPPYI S  +  L 
Sbjct: 146 TDLSPGACALARENAETLGVSSRVTFLQGDLFAPVPADARFALVVSNPPYIASGEIPGLS 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +EVR  +P ++LDGG DGL   R +  G  R+L   GL ++EIG  Q   V  +  +   
Sbjct: 206 VEVRR-EPHLALDGGRDGLDLIRRVIQGARRYLAPGGLLAMEIGETQGAAVKELLHAAGY 264

Query: 245 FLVNAFKDYGGNDRVLLFC 263
                 KD    DR+    
Sbjct: 265 SDARVEKDLERRDRLAFGT 283


>gi|205352557|ref|YP_002226358.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205272338|emb|CAR37218.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326627617|gb|EGE33960.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 277

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V  +F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPSGFLLLEHGWQQGEAVRAVFRR 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +DYGGN+RV 
Sbjct: 253 SGYSDVETCRDYGGNERVT 271


>gi|292488089|ref|YP_003530966.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia amylovora CFBP1430]
 gi|292899300|ref|YP_003538669.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291199148|emb|CBJ46262.1| protein methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291553513|emb|CBA20558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia amylovora CFBP1430]
          Length = 281

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DSVLD      L   + R    E I  + G R+F++
Sbjct: 20  PKRDAEILLQLVTGKSRAWLIGFDDSVLDAAALEQLHALLTRRAAGEPIAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ DT  PRP++E+LV+ ALA             ILDLGTG+GA+ LAL  E P  
Sbjct: 80  LSLNVTPDTLIPRPDSEVLVEQALAHL-----PDAACSILDLGTGSGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G+D    A+ +A+ NA   G++     +  +WFS+++   F VIVSNPPYI++    
Sbjct: 135 QISGIDRIPAAVALAQHNAARLGLA-NATFMPGNWFSALKPQQFAVIVSNPPYIDAADKH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I   
Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +DYGGNDRV    +
Sbjct: 253 NHYCRIETCQDYGGNDRVTFGQK 275


>gi|238917366|ref|YP_002930883.1| HemK protein [Eubacterium eligens ATCC 27750]
 gi|238872726|gb|ACR72436.1| HemK protein [Eubacterium eligens ATCC 27750]
          Length = 279

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 89/265 (33%), Positives = 131/265 (49%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  DS   L  + G++    +++ DS+L +         I +   H  +  ILG   FY
Sbjct: 22  NAEHDSFELLSAINGMTRTFYLINGDSLLSEENFLMFEEYIEQRASHIPLQHILGKTWFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++SD   PR +TE+LV   +  +      R    ILD+ TG+G + + L K+ P 
Sbjct: 82  GYEYMVNSDVLIPRQDTEILVGEVIKVT------RSGDYILDMCTGSGCIGITLAKKFPE 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            + +GVD+S KAL +A+SN   N  +E  D ++SD F  +     F+ IVSNPPYI + +
Sbjct: 136 CRVLGVDVSEKALNVAQSN-KHNLEAENIDFMRSDLFEELNHDITFNTIVSNPPYIPTKV 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EVR  DP ++LDG  DGL  YR I       L  DG    EIG  Q  DV  I 
Sbjct: 195 IEGLQEEVRLHDPILALDGMEDGLMFYRKITAQAGDFLETDGYLCYEIGAEQAADVSDIM 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      +   KD  G DRV++  +
Sbjct: 255 KKAGFKDITVVKDLAGFDRVVMGRK 279


>gi|254429562|ref|ZP_05043269.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
 gi|196195731|gb|EDX90690.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
          Length = 275

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V G     +   P+  L   Q+   T+ +   +  E +  ++G R+F+ 
Sbjct: 20  AALDAELLLCHVLGKPRSYLFTWPERELSTAQQADFTSLLGHRVAGEPVAHLIGEREFFG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++DT  PRP+TE LV+ AL+  +P        R++DLGTGTGA+ ++L    P +
Sbjct: 80  HLFRVTADTLIPRPDTETLVEKALSLDVPA-----EARVVDLGTGTGAIGVSLALARPDW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VD+S  AL++A  NA   G +     LQ  W S   G FD+IVSNPPYIE      
Sbjct: 135 HVTLVDLSEAALQVAADNAHRLGAA--VTCLQGSWLSPCPGPFDLIVSNPPYIEESDHHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L    +GL+    I    +  L   G   +E G+ Q   V  +    
Sbjct: 193 DEGDVR-FEPRSALVAPNNGLADLAAITQQAAGKLVAGGWLLLEHGFEQGEAVRTLLTQA 251

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   +D GGNDRV    
Sbjct: 252 GFVQVGTAQDLGGNDRVTFGQ 272


>gi|148981992|ref|ZP_01816580.1| HemK protein [Vibrionales bacterium SWAT-3]
 gi|145960680|gb|EDK26024.1| HemK protein [Vibrionales bacterium SWAT-3]
          Length = 290

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 87/266 (32%), Positives = 124/266 (46%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P++ L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPETHLTSEQESEFQALLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E P     
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMPNRPVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177
           G+D+  +A  +A  NA    ++     L   WF  + G         F +IVSNPPYIE 
Sbjct: 144 GIDLRPEAQALATENAKRLNIT-NATFLHGSWFDPLSGLASDGDEVKFSLIVSNPPYIEK 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q + V  
Sbjct: 203 DDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARGFLEDEGWLAFEHGYDQGLAVRE 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           I ++     V   KDY GNDRV L  
Sbjct: 262 IMQTLGYLDVVTEKDYCGNDRVTLGR 287


>gi|152984205|ref|YP_001350645.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas aeruginosa PA7]
 gi|150959363|gb|ABR81388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas aeruginosa PA7]
          Length = 276

 Score =  288 bits (737), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANELFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVETALATL-----AADSATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +   S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVCHSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I +   R+L  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGNDGLDDIRQIVEQAPRYLLAEGWLLLEHGYDQGAAVRDLLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V   +D GGN+R+ L  
Sbjct: 252 RGFAGVRTLRDLGGNERITLGQ 273


>gi|251789677|ref|YP_003004398.1| modification methylase, HemK family [Dickeya zeae Ech1591]
 gi|247538298|gb|ACT06919.1| modification methylase, HemK family [Dickeya zeae Ech1591]
          Length = 283

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  +TG     ++   ++ L D +   L + + R +  E I  ++G+R+F++
Sbjct: 20  PKRDAEILLEHITGKGRTFLLAFGETELMDSEYQTLESLLARRVTGEPIAYLIGYREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA             ++DLGTGTGA+ LA+  E P  
Sbjct: 80  LPLAVSPVTLIPRPDTECLVEHALAHL-----PAGASSVVDLGTGTGAIALAIAHERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + VGVD    A+ +A  NA    +      L  DWFS + G  F +IVSNPPYI+     
Sbjct: 135 RVVGVDRQHDAVVLASHNARRLEI-NNAQFLPGDWFSPLAGQRFSLIVSNPPYIDEHDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    DGL+  R I       L  DG   +E G+ Q   V  +   
Sbjct: 194 LSRGDVR-FEPASALVAAEDGLADLRQIIRQAGTFLLDDGWLLLEHGWQQGQAVRALLSQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V  ++DYG N+RV L  
Sbjct: 253 YGFAQVKTYRDYGDNERVTLGQ 274


>gi|158520490|ref|YP_001528360.1| HemK family modification methylase [Desulfococcus oleovorans Hxd3]
 gi|158509316|gb|ABW66283.1| modification methylase, HemK family [Desulfococcus oleovorans Hxd3]
          Length = 297

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 95/271 (35%), Positives = 139/271 (51%), Gaps = 8/271 (2%)

Query: 1   MQALRD-SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A R  +   L  V G+    + +  D  L   +     + I R    E +  ILG + 
Sbjct: 26  VEAPRVSAELLLAHVLGIKRLDLYLRYDQPLTPDELAAFRSLISRRKAGEPVAYILGEKA 85

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118
           F+++ L ++ D   PRP+TE LV++AL+F           R +L+  TG+GAV LAL K 
Sbjct: 86  FWSMDLVVTPDVLIPRPDTECLVETALSFLAGPGSDTPAERWVLEPATGSGAVVLALAKS 145

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174
            P  +    D S  AL +A+ NAV    + R     SDWFS++     G FD+IV+NPPY
Sbjct: 146 HPGCRFFAFDRSTAALAVARKNAVRYDPAHRVVFFASDWFSALGNSASGRFDMIVANPPY 205

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           + S  +D L  E+  F+PR++LDGG DGL   R I     R L   G   +EIG++QK  
Sbjct: 206 VASGDIDHLAPEI-GFEPRMALDGGADGLDPVRHILQAAGRFLKPGGRLLIEIGWDQKER 264

Query: 235 VVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           V ++ E   L+  V   KD  G+ RV+   R
Sbjct: 265 VAQVTEQAGLYTAVGFAKDLAGHHRVVHMQR 295


>gi|117926779|ref|YP_867396.1| HemK family modification methylase [Magnetococcus sp. MC-1]
 gi|117610535|gb|ABK45990.1| [protein release factor]-glutamine N5-methyltransferase
           [Magnetococcus sp. MC-1]
          Length = 289

 Score =  287 bits (736), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 94/264 (35%), Positives = 135/264 (51%), Gaps = 4/264 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L     L    + +DPD  L   +       I R    E +  I+G + F +
Sbjct: 28  PRLDGELLLAHTLTLRRLDLFLDPDRPLSPDELQRYKAFIKRRAAREPVAYIVGKKPFLH 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             LT+++    PRPETE LV +A  F     ++R    ILD+GTG+GA+ LALL      
Sbjct: 88  WELTVTAGVLIPRPETEHLVQAAQDFFNQ--QQRAPHTILDIGTGSGAILLALLDHFNEA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +G+G+DIS  AL  A+ N     ++ R   L S +   +  E  FD+I+SNPPYI S ++
Sbjct: 146 QGIGIDISKAALACAQHNGEQLNLNNRAQWLYSHFCDDLPHESRFDLILSNPPYINSDVI 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  ++PR++LDGG+DG+  Y+ I       LN  GL  VEIG++Q   V  + +
Sbjct: 206 PTLEAEVNQWEPRLALDGGVDGMQAYQQIIPAAVARLNPGGLLGVEIGHDQGPRVAALMQ 265

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
              L  V   KDY  +DRV+L  R
Sbjct: 266 QHGLQQVVVHKDYAQHDRVVLGHR 289


>gi|188534014|ref|YP_001907811.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99]
 gi|188029056|emb|CAO96924.1| Protein methyltransferase [Erwinia tasmaniensis Et1/99]
          Length = 281

 Score =  287 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 91/263 (34%), Positives = 137/263 (52%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   D  LD      L   +VR    E I  + G R+F++
Sbjct: 20  PKRDAEILLGLVTGKSRAWLIGFDDHELDAATLKRLDALLVRRAAGEPIAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ DT  PRP++E+LV+ ALA             +LDLGTG+GA+ LAL  E    
Sbjct: 80  LSLCVTPDTLIPRPDSEVLVEQALAHL-----PGGPCSVLDLGTGSGAIALALASERADC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           + +GVD    A+ +A+ NA   G++     +Q DWFS++ +  F +IVSNPPYI++    
Sbjct: 135 RVLGVDRIPAAVALAQHNAARLGLA-NATFMQGDWFSALNQQRFAMIVSNPPYIDAADEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+  + IA    R+L   G   +E G+ Q  D+ +I   
Sbjct: 194 LAQGDVR-FEPASALVAGDSGLADIKIIAAQAGRYLVNQGWLLLEHGWQQGEDIRQILAD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    ++  +DYGGNDRV    +
Sbjct: 253 KGFCQISTRQDYGGNDRVTFGQK 275


>gi|254244444|ref|ZP_04937766.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192]
 gi|126197822|gb|EAZ61885.1| hypothetical protein PA2G_05302 [Pseudomonas aeruginosa 2192]
          Length = 276

 Score =  287 bits (736), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV++ALA         D   +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVETALATLTA-----DTATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I     +HL  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V+  +D GGN+R+ L  
Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273


>gi|145639101|ref|ZP_01794709.1| HemK [Haemophilus influenzae PittII]
 gi|145272073|gb|EDK11982.1| HemK [Haemophilus influenzae PittII]
 gi|309751052|gb|ADO81036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae R2866]
          Length = 292

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 144/270 (53%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALL---- 116
           ++ L +S  T  PRP+TE+LV+ AL  SL ++E+     RILDLGTGTGA+ LAL     
Sbjct: 82  SLPLNVSKGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELF 141

Query: 117 ----KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
               K     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 SICQKRQISLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+         +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q 
Sbjct: 200 PYIDVQDEHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|156933677|ref|YP_001437593.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter sakazakii ATCC BAA-894]
 gi|156531931|gb|ABU76757.1| hypothetical protein ESA_01499 [Cronobacter sakazakii ATCC BAA-894]
          Length = 285

 Score =  287 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L D +   L   + R    E +  ++G R+F++
Sbjct: 20  PRRDAEILLAFVTGRTRTFILAFGETALTDDEHERLDALLARRAAGEPVAYLIGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA             ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLEVSPATLIPRPDTECLVEQALARL-----PATPCCILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               +D+  +A+ +AK NA   G+ +    LQS WFS++ +  F +IVSNPPYI+     
Sbjct: 135 HVTALDVIPEAVALAKRNAQRLGI-DNVTILQSHWFSALTDVRFSLIVSNPPYIDGDDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     GL+   T+     R L  +G   +E G+ Q   V  +F  
Sbjct: 194 LSQGDVR-FEPKSALVADDAGLADLETLVTEARRFLEDNGWLMLEHGWQQGEAVRELFTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +DYGGN+R+ L 
Sbjct: 253 AGYQAVETCRDYGGNERLTLG 273


>gi|291560727|emb|CBL39527.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SSC/2]
          Length = 283

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 6/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60
            A  D+         +S    +      ++D++        I +  +H  +  ILG ++F
Sbjct: 21  NASGDAWYLFSECFHISREDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 ++ D   PR +TE +++  L         +    ILD+ TG+G + ++L     
Sbjct: 81  MGYTFKVTPDVLIPRADTETVLEEVLDQLKQ---SKKPDTILDICTGSGCIAISLALILK 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               VG DIS KAL+IAK+N     ++     +QSD F +V G +D+I+SNPPYI +   
Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV+D++P ++LDG  DGL  Y+ I      +LN  G+ + EIGY+Q   V  + E
Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
           ++    V   KD  G DR++  
Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277


>gi|16760668|ref|NP_456285.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|29141573|ref|NP_804915.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|213051785|ref|ZP_03344663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213419807|ref|ZP_03352873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
 gi|213426496|ref|ZP_03359246.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213581390|ref|ZP_03363216.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213859592|ref|ZP_03385296.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|289827377|ref|ZP_06545997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|25513362|pir||AI0719 HemK protein, probable protoporphyrinogen oxidase hemK [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502964|emb|CAD02130.1| HemK protein, putative protoporphyrinogen oxidase [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29137200|gb|AAO68764.1| HemK protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
          Length = 277

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 129/258 (50%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRR 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V   +DYGGN+RV
Sbjct: 253 SGYTDVETCRDYGGNERV 270


>gi|301170296|emb|CBW29902.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Haemophilus influenzae 10810]
          Length = 292

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYINAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|149174662|ref|ZP_01853287.1| hemK protein [Planctomyces maris DSM 8797]
 gi|148846356|gb|EDL60694.1| hemK protein [Planctomyces maris DSM 8797]
          Length = 309

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L         ++  + + V+ +++R  +   + R    E +  ++G R+F+ 
Sbjct: 44  PRLDTEVLLAHARNCERIRLYTNYEDVVTEQERALMRQLVQRRANSEPVAYLVGNREFFG 103

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +  +   PRP+TE LV       +   +K     ILDL TG+G + ++        
Sbjct: 104 LDFYVDKNVLVPRPDTETLV----IELVDEAQKLTNPFILDLCTGSGCIAISAAANCHNA 159

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           K    DIS  AL IA+ NA +N +S +   L SD F  +    LFD+IVSNPPYI    +
Sbjct: 160 KFQATDISEPALAIAQKNAASNELSNQIQFLLSDCFEQIPPGTLFDIIVSNPPYIPDAEI 219

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +VR  +PR++L GG DGL  YR I     R+L   GL  +E    Q+ D++ +F+
Sbjct: 220 EQLEKDVRQHEPRLALSGGKDGLDFYRKIIQEAGRYLKDQGLLMLEFSPEQEADLLALFK 279

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      V    D  G  RV++  +
Sbjct: 280 ATGEYTNVRVKADLAGRARVIIGQK 304


>gi|119945324|ref|YP_943004.1| modification methylase, HemK family protein [Psychromonas
           ingrahamii 37]
 gi|119863928|gb|ABM03405.1| modification methylase, HemK family protein [Psychromonas
           ingrahamii 37]
          Length = 279

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   L  V    +  ++  P+  L   Q+      I + +K   +  + G R+F++
Sbjct: 20  ALLDAQVLLAFVLEKETVYLMTWPERELSQAQKSAFEGLISQRVKGVPVAHLTGAREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TELLV++AL +           RILDLGTG+GA+ LAL  E P  
Sbjct: 80  LPLKVNNSTLIPRPDTELLVEAALDY------CSADARILDLGTGSGAIILALASELPDA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +GVD++  A+++A  N     +       QS+WF ++ GLFDV+VSNPPYIE      
Sbjct: 134 YCLGVDVNESAVQLAIENGKNLKL-NNVHFQQSNWFDNINGLFDVVVSNPPYIEKNDHHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  R IA     +L K G   VE G+NQ   V  +F   
Sbjct: 193 KLGDVR-FEPLSALVADENGLADIRKIAQKTPEYLKKGGYLLVEHGFNQGSTVRELFTDL 251

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KDYG NDRV + 
Sbjct: 252 GYSEVITIKDYGDNDRVTMG 271


>gi|153868970|ref|ZP_01998684.1| hemK protein [Beggiatoa sp. PS]
 gi|152074464|gb|EDN71316.1| hemK protein [Beggiatoa sp. PS]
          Length = 280

 Score =  287 bits (735), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 136/262 (51%), Gaps = 7/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC +  ++   ++  P+ +L + Q       + R ++   I  ++G + F++
Sbjct: 22  PRLDAEILLCHILNVTRSYLLAWPEKILTENQYAQFQALLTRRVQGVPIAYLIGSKAFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L ++ +T  PRPETELLV+  LA    R+      +++DLGTG+GA+ LA+ KE P+ 
Sbjct: 82  FDLQVTKNTLIPRPETELLVEQVLA----RLPPDSDAQVIDLGTGSGAIALAIAKERPYC 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           + +  D + +AL++A++NA   G       L SDW+S++ +    ++VSNPPY+      
Sbjct: 138 RLLATDNATEALQVAQANAQHLGF-HPIKFLLSDWWSALGDIKATIVVSNPPYVAENDCH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +V   +PR +L  G+DGL+  R +      HL  +G   +E GY+Q   V ++FE 
Sbjct: 197 LTQGDV-HHEPRNALVAGVDGLTDIRALVKESLSHLEINGWLLLEHGYDQGEAVQQLFEQ 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    +  + D  G  RV +  
Sbjct: 256 QGYQAIETYYDLAGLPRVTVGQ 277


>gi|254515299|ref|ZP_05127360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium NOR5-3]
 gi|219677542|gb|EED33907.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium NOR5-3]
          Length = 278

 Score =  286 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 7/258 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   LC          +  P++ + +         + +  +   +  +LG RDF+
Sbjct: 18  EARREAEVLLCAALNKPRSYFMAWPEADVAEAIARRYRQWLQQRAEGVPVAYLLGTRDFW 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + LT++  T  PRP+TELLV+ ALA  LP     +   +LDLGTG+GA+ LAL  E P 
Sbjct: 78  TLSLTVNEATLIPRPDTELLVEQALALELP-----ESATVLDLGTGSGAIALALATERPQ 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           ++ +GV+ S +AL +A  NA   G+ +    L SDWFS V G FD+IVSNPPYI      
Sbjct: 133 WRVLGVERSPEALAVAIDNARQLGL-DSVQWLSSDWFSQVVGRFDLIVSNPPYIADQDAH 191

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+PR +L  G DGL   R I      HL   G   +E G+ Q   V  +  +
Sbjct: 192 LATGDLR-FEPRSALASGSDGLDDIRKIIARSPDHLEPGGHLLLEHGFEQAPAVRALLTA 250

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V ++ D  G++RV
Sbjct: 251 TGFANVASYDDLAGHERV 268


>gi|315179417|gb|ADT86331.1| hemK protein [Vibrio furnissii NCTC 11218]
          Length = 278

 Score =  286 bits (734), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +LDD         + R L  E +  I+G R+F+++ 
Sbjct: 13  LDAAVLLCHALDKPRSYLLTWPDKLLDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLP 72

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +     +     ILDLGTGTGA+ LAL  E P  + 
Sbjct: 73  LKVSPSTLIPRPDTERLVEVALEKA-----QTLTGDILDLGTGTGAIALALASELPQRRV 127

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           VG+D+  +A ++A  NA    ++     LQ  WF  +     F +IVSNPPYIE      
Sbjct: 128 VGIDLRDEAQQLASDNANRLHLT-NVTFLQGSWFEPLSHGTKFALIVSNPPYIEENDPHL 186

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  + I+D    +L   G  + E GY+Q   V  I ++ 
Sbjct: 187 AQGDVR-FEPKSALVAADNGLADIKHISDAGRDYLQSGGWLAFEHGYDQGASVRTIMQAL 245

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   +DY G+DRV L  
Sbjct: 246 GYQHVITEQDYAGHDRVTLGQ 266


>gi|304317930|ref|YP_003853075.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302779432|gb|ADL69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 277

 Score =  286 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 88/265 (33%), Positives = 134/265 (50%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   +S + L    G S   ++++ D  L D         +           I+G + F 
Sbjct: 20  EPRIESEALLSFTLGASKEYLLINRDKELTDDSFNKYMEVLDLRKSGMPYQYIVGEKHFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV+  L         +    +LD+GTG+GA+ +++ K    
Sbjct: 80  GLIFNVSPSVLIPRNDTEILVEEVLKRL------KSGDTVLDIGTGSGAIAVSIAK-YKD 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            K   VDIS  ALE+AK NA  NGVS++   ++SD FSS+     FD+IVSNPPYI S  
Sbjct: 133 VKVYAVDISDGALEVAKENADINGVSDKVIFIKSDLFSSIPDGIRFDLIVSNPPYIRSNE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P+I+LDGG DGL+ YR I      ++   G+ + E+G++Q  DV  I 
Sbjct: 193 INELQEEVKR-EPKIALDGGEDGLTFYRRIVKDSVNYIKFGGIIAFEVGFDQAWDVKDIL 251

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +   KD  G DRV+L  R
Sbjct: 252 VDGGYSDIEVVKDLQGIDRVVLGKR 276


>gi|170683182|ref|YP_001743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218699919|ref|YP_002407548.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|170520900|gb|ACB19078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli SMS-3-5]
 gi|218369905|emb|CAR17680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli IAI39]
          Length = 277

 Score =  286 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLAHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDCMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|317491753|ref|ZP_07950188.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920187|gb|EFV41511.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 280

 Score =  286 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  V G S   ++   ++ L   Q   L   + R  + E +  +LG R+F++
Sbjct: 20  PKRDAEILLGFVAGKSRSSILAFGETELTPEQVQQLELLLARRERGEPVAYLLGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA     +       +LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLEVSPATLIPRPDTECLVEKALA-----LLPVAACSVLDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           + VGVD S  A  +A  NA    ++     +   W+  V    F +I SNPPYI+     
Sbjct: 135 QFVGVDYSADATALASRNASRLNIT-NVTFVTGSWYDPVGAQQFALIASNPPYIDESDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  R I +    HL + G   +E G+ Q   V ++ ++
Sbjct: 194 LSQGDVR-FEPASALVAPENGLADLRHIVEYAPDHLIEGGWLIMEHGWQQGEAVRQLLKA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V   KDYG NDR+ L  
Sbjct: 253 RGFTDVVTEKDYGNNDRITLGQ 274


>gi|322434295|ref|YP_004216507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX9]
 gi|321162022|gb|ADW67727.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX9]
          Length = 282

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 130/264 (49%), Gaps = 8/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   L    G+ S  +   P+  +D  Q+     AI R L  E I  ILG ++FY 
Sbjct: 24  ALADAAILLTHTLGIDSTTLRAHPERPIDRDQQAVYQRAIERRLTFEPIQYILGTQEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETE LV++  A    R+     VRILD+GTG+GA+ +AL    P  
Sbjct: 84  LPFRVTPAVLIPRPETEHLVEAVAA----RVPHNRPVRILDVGTGSGAIAIALAHLLPHA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
               +DIS +A+EIA+ NA TN ++ R D  QSD F++V     F  IVSNPPYI     
Sbjct: 140 HITALDISPEAIEIAQENARTNHLAARIDFQQSDLFTAVTKGPPFAAIVSNPPYIPLSDS 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +VRD++P  +L  G  G   Y  +       L  +GL ++EIG  Q+  +  +  
Sbjct: 200 ESLHPQVRDYEPHQALFSGPTGFEVYERLIIQAPSLLLPNGLIALEIGQGQQPRMAELLR 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V    D     RV L  R
Sbjct: 260 F--WRSVEFLPDLQQIPRVALARR 281


>gi|209694373|ref|YP_002262301.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238]
 gi|208008324|emb|CAQ78476.1| protein methyltransferase HemK [Aliivibrio salmonicida LFI1238]
          Length = 288

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 130/260 (50%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC V       ++  P+ ++ + +     + + R L  E I  I+G+R+F+++ L
Sbjct: 27  DAAVLLCHVLDKPRSYLLTWPEKLVAETEYNAFESLLSRRLSGEPIAYIIGYREFWSLPL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL    P  EK     +LDLGTGTGA+ LA+  E P    +
Sbjct: 87  KVSPTTLIPRPDTERLVEVALEHLSPSSEK-----VLDLGTGTGAIALAIASEMPDMCVI 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
           GVD    A+ +AK NA  N +    +  Q  WF  +  +  F +IVSNPPYI+       
Sbjct: 142 GVDYQYDAVALAKDNAKDNNILNT-EFRQGSWFDPIRMDEQFSIIVSNPPYIDGNDPHLS 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P+ +L    +G +    I +    HL ++G   +E G+ Q   +   FE   
Sbjct: 201 QGDVR-FEPQTALVAEKEGFADLIHIMEHSRTHLVENGWLLMEHGFEQGKQLRDYFEEYG 259

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   +DY GNDRV L  
Sbjct: 260 FINVKTEQDYAGNDRVTLGQ 279


>gi|218704734|ref|YP_002412253.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|293404755|ref|ZP_06648747.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298380398|ref|ZP_06989997.1| HemK protein [Escherichia coli FVEC1302]
 gi|300896600|ref|ZP_07115119.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           198-1]
 gi|218431831|emb|CAR12716.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli UMN026]
 gi|291426963|gb|EFE99989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298277840|gb|EFI19354.1| HemK protein [Escherichia coli FVEC1302]
 gi|300359543|gb|EFJ75413.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           198-1]
          Length = 277

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|37525988|ref|NP_929332.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785418|emb|CAE14364.1| Protein methyltranferase HemK (Protein-glutamine
           N-methyltransferase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 282

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VT  S   ++   ++ L   Q   L   + R +K E I  I G R+F++
Sbjct: 20  PKRDAEILLGFVTHHSRTYLLAFGETQLAPEQFSQLEALLARRVKGEPIAYITGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLNVSPATLIPRPDTECLVEKALERL-----SLTPCRILDLGTGTGAIALAIASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +  GVDI+  A+ +A+ NA    +    D L S+WF S+    F +IVSNPPYI+     
Sbjct: 135 RVTGVDINPDAVMLAQGNAEKLKIQ-NVDFLLSNWFFSLNNQQFGMIVSNPPYIDETDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++   TI D     L   G   +E G+ Q   +  +F  
Sbjct: 194 LSQGDVR-FEPDSALIAAKQGIADLNTIIDLSRHFLLPGGWLLLEHGWKQGNVIRSLFSE 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V  F+DYGGN+R+ 
Sbjct: 253 SGYRQVATFQDYGGNERIT 271


>gi|293395775|ref|ZP_06640057.1| protein methyltransferase HemK [Serratia odorifera DSM 4582]
 gi|291421712|gb|EFE94959.1| protein methyltransferase HemK [Serratia odorifera DSM 4582]
          Length = 276

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG +   ++   +++L  ++   L   ++R  + E +  ++G R+F++
Sbjct: 20  AKRDAEILLGFVTGRARTFLLAFGETLLTTQESAQLEQLLMRRERGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ ALA             ILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSPATLIPRPDTECLVEQALARLPAH-----RCEILDLGTGTGAIALALASERADC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
              GVD+  +A+ +A+ NA    +       Q DWF+ V G  FD+I SNPPYI+   V 
Sbjct: 135 MVTGVDLQPQAVALAQHNAQKLAIG-NVQFHQGDWFTPVAGRRFDLIASNPPYIDGDDVH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R I     R+L   G   +E G+ Q   V  +  +
Sbjct: 194 LSQGDVR-FEPGSALVAQEHGLADLRAIVQQAPRYLQPQGWLLLEHGWQQAESVRAMLAA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                + + +DYGGN RV L  
Sbjct: 253 AGFSAIESCRDYGGNLRVTLGQ 274


>gi|323977217|gb|EGB72304.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509]
          Length = 277

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|167766741|ref|ZP_02438794.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1]
 gi|167711495|gb|EDS22074.1| hypothetical protein CLOSS21_01247 [Clostridium sp. SS2/1]
          Length = 283

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 6/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60
            A  D+         +S    +      ++D++        I +  +H  +  ILG ++F
Sbjct: 21  NASGDAWYLFSECFHISREDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 ++ D   PR +TE +++  L      ++    ++ILDL TG+G + ++L     
Sbjct: 81  MGYTFKVTPDVLIPRADTETVLEEVLLKVPQTLKN---LKILDLCTGSGCIAISLALILK 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               VG DIS KAL+IAK+N     ++     +QSD F +V G +D+I+SNPPYI +   
Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV+D++P ++LDG  DGL  Y+ I      +LN  G+ + EIGY+Q   V  + E
Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
           ++    V   KD  G DR++  
Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277


>gi|284921024|emb|CBG34089.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Escherichia coli 042]
          Length = 277

 Score =  286 bits (733), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|157804238|ref|YP_001492787.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str.
           McKiel]
 gi|157785501|gb|ABV74002.1| tRNA (guanine-N(7)-)-methyltransferase [Rickettsia canadensis str.
           McKiel]
          Length = 323

 Score =  286 bits (732), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 85/283 (30%), Positives = 146/283 (51%), Gaps = 23/283 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  ++   L  V       +++  D  L+  +       + R LKHE I  I+G ++FY+
Sbjct: 24  SQLEARILLQHVINTPLQYLLIKLDEQLNQSEIEAFEKLLERRLKHEPIAYIIGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALA----------------------FSLPRIEKRDVVR 100
               ++     PR +TELLVD  +A                             + + ++
Sbjct: 84  REFIVNKHVLIPRGDTELLVDIVVALVKRCHYRESRNPVNHYMDTCLRGYDTRLQTNNIK 143

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           IL+LGTG+G + ++LL E P    +  DIS  A+E+A++NA+ + V++    + S+WF +
Sbjct: 144 ILELGTGSGCIAISLLCELPNANVIATDISLDAIEVARNNALKHHVTDHIQIIHSNWFEN 203

Query: 161 VE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +E   FD IVSNPPYI +     + +E  +++P ++L    +GL  Y+TIA+   + L +
Sbjct: 204 IENQKFDFIVSNPPYISNTEKSEMAIETINYEPHLALFAEENGLQSYKTIAENAKKFLKQ 263

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +G  ++EIG+ QK  V++IF  +   L N +KD  G  RV+LF
Sbjct: 264 NGKLALEIGFKQKETVIQIFLDQGYNLENVYKDLQGYSRVILF 306


>gi|315127041|ref|YP_004069044.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas sp. SM9913]
 gi|315015555|gb|ADT68893.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Pseudoalteromonas sp. SM9913]
          Length = 279

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +       +   P+  L D Q      A  R L  E +  I G+R+F++
Sbjct: 23  AKLDAQVLLLNILQKPRSYLFTWPEKQLTDEQSQAFERACERRLNGEPVSHITGYREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L ++  T  PRP+TE LV+ AL+ ++P     +  ++LDLGTGTGA+ LAL  E P +
Sbjct: 83  LQLEVNPTTLIPRPDTETLVELALSCNVP-----NDAKVLDLGTGTGAIALALGSEMPTW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             + VD    A+ +AK N     +       QS+WFS++    FD+IV+NPPYIE     
Sbjct: 138 DIIAVDRIDDAVALAKRNQKRLAI-NNVCVEQSNWFSALNNKKFDLIVTNPPYIEYNDKH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  + I      +L+ +G   +E G+ Q   V  IF  
Sbjct: 197 LHQGDVR-FEPLSALVADDAGLADIKQIITQSRDYLHSNGYLLIEHGFEQSAAVRHIFNQ 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V+  KD G NDRV    
Sbjct: 256 MAFINVSTVKDLGNNDRVTFGQ 277


>gi|293409599|ref|ZP_06653175.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
 gi|331672744|ref|ZP_08373530.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA280]
 gi|291470067|gb|EFF12551.1| hypothetical protein ECEG_00538 [Escherichia coli B354]
 gi|331069965|gb|EGI41334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA280]
          Length = 277

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGHQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|91206058|ref|YP_538413.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii RML369-C]
 gi|122425238|sp|Q1RH40|HEMK_RICBR RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|91069602|gb|ABE05324.1| Methylase of polypeptide chain release factors [Rickettsia bellii
           RML369-C]
          Length = 556

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 23/282 (8%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L          ++ +P+  L+  +   +   + R LKHE I  ILG ++FY
Sbjct: 23  NPKLEARILLQHAINKPYEYLLANPEKQLNQLEIEAVEKVLERRLKHEPIAYILGTKEFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPR-------------------IEKRDVVR-- 100
           +    ++     PR +TE+L+D  L +                       ++ R+ ++  
Sbjct: 83  SREFIVNKHVLIPRNDTEILIDVVLQYHSQHSLCHSSNGGNPDKKQLDSVVKPRNNIKSS 142

Query: 101 -ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            IL+LGTG+G + ++LL E P  +    DIS  A+E+AKSNA+ + V++R   + S+WF 
Sbjct: 143 NILELGTGSGCISISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQIIHSNWFE 202

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++ +  FD+IVSNPPYI       + +E  +++P I+L    DGL  Y+ IA+   + L 
Sbjct: 203 NIGKQKFDLIVSNPPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAENAKKFLK 262

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           ++G   +EIGY Q   V +IF      + N  +D   ++RV+
Sbjct: 263 QNGKIILEIGYKQADQVSQIFLDHGYVIDNIHQDLQSHNRVI 304


>gi|238019081|ref|ZP_04599507.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748]
 gi|237864336|gb|EEP65626.1| hypothetical protein VEIDISOL_00943 [Veillonella dispar ATCC 17748]
          Length = 289

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 126/264 (47%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       +    K   +  I+G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQEELDAFRPLVQERAKGHCVAAIIGEKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        K   VRILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTETLIEHVLG----AYPKDSKVRILDVCTGPGTILLSLLHYLPNA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG++IS  AL +A+ N     +++R   L+SD FS+++G    FD+IVSNPPYI +  
Sbjct: 143 CGVGLEISTDALTVAEENRERFNLNDRVQLLESDMFSALDGKAEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V + +P I+L GG DGL  YR +A     +L   G  + EIGY+Q  +V  + 
Sbjct: 203 AKLLSQDVLN-EPHIALFGGEDGLEFYRILAKACGTYLKPQGRIAFEIGYDQAEEVKSLL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           +       +    D GGN+RV+  
Sbjct: 262 KEAGHYSNIQCIADLGGNNRVVTA 285


>gi|307265647|ref|ZP_07547200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389250|ref|ZP_08210818.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter ethanolicus JW 200]
 gi|306919291|gb|EFN49512.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994613|gb|EGD53037.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 279

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 130/263 (49%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L    G+    +I+  +  +++ +       +     H     I+  + F 
Sbjct: 20  NPKLEAELLLAYCLGMDRINLIIKREDEVEEGELAKFLGLLNMRKSHIPYQYIVKKQHFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRPETE+LV+  L     R+E+ +V  ILD+GTG+GA+ +++ K    
Sbjct: 80  GLEFFVDENVLIPRPETEILVEEVLK----RVERGNV--ILDIGTGSGAIAVSISKYFAD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VDIS KA+E+AK NA   GV +R   ++SD F ++     FD IVSNPPYI+   
Sbjct: 134 CTVYAVDISKKAIEVAKYNAEKQGVLDRIFFIESDLFRNLPPNLKFDFIVSNPPYIKRNE 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EV+  +P ++LDGG DGL  Y+ I      ++   G    EIGY QK ++    
Sbjct: 194 IELLQEEVKK-EPIVALDGGEDGLFFYKKIIKEAPFYMKSGGKIGFEIGYGQKEEITNFL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      +   KD  G DRV++ 
Sbjct: 253 EKDGFKDIEIIKDLAGIDRVIIA 275


>gi|145632950|ref|ZP_01788683.1| HemK [Haemophilus influenzae 3655]
 gi|144986606|gb|EDJ93172.1| HemK [Haemophilus influenzae 3655]
          Length = 292

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTESLVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGQFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANDEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF+     +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFQENHWEMVETVRDYGDNERVTLG 288


>gi|222149910|ref|YP_002550867.1| protoporphyrinogen oxidase [Agrobacterium vitis S4]
 gi|221736892|gb|ACM37855.1| protoporphyrinogen oxidase [Agrobacterium vitis S4]
          Length = 293

 Score =  285 bits (731), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/262 (45%), Positives = 166/262 (63%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+ + +  + GL+S  +IV  + VL   +   +  A+ R L  E +HRILG R FY
Sbjct: 26  DAPRDARTLIAGLLGLTSTDLIVQDNRVLSAEETSLIETAVERRLLFEPVHRILGRRAFY 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L LS  T EPRP+TE+L++  L      + K   VR+LD+GTGTGA+ LALL+E P 
Sbjct: 86  GLELALSPATLEPRPDTEILIERVLPHLHAMVAKNGSVRLLDMGTGTGAIALALLQECPG 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +  DIS +AL +A+ NA  N +S+RF+TLQS W+ ++ G FD+I+SNPPYI S ++ 
Sbjct: 146 TTALATDISAEALAMARQNAAANSLSDRFETLQSHWYEALSGRFDIILSNPPYIVSDVIK 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR +DP ++LDGG DGL  YR IA G +  L   GL  VEIGY+Q + V ++F +
Sbjct: 206 DLAPDVRLYDPAVALDGGDDGLDAYRAIAAGAADFLKPGGLVGVEIGYDQAMAVTQLFAN 265

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
               LV + KD+G NDR+LLF 
Sbjct: 266 NSFVLVESAKDHGDNDRILLFA 287


>gi|121534883|ref|ZP_01666702.1| modification methylase, HemK family [Thermosinus carboxydivorans
           Nor1]
 gi|121306482|gb|EAX47405.1| modification methylase, HemK family [Thermosinus carboxydivorans
           Nor1]
          Length = 289

 Score =  285 bits (731), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 134/263 (50%), Gaps = 6/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  + G     + ++ D  L+  +      A+ + +    +  I G ++F  
Sbjct: 30  PRLDAEVLLSHILGRDRLYLYLNYDQPLEPAELAAFREAVKKRVLRVPVAYITGHKEFMG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++SD   PRP+TE+LV++ALA    R+       +LDLGTG+GA+ ++LL      
Sbjct: 90  LDFIVTSDVLVPRPDTEVLVEAALA----RLAGVSTPVVLDLGTGSGAIIVSLLHRLQAA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
            G+GVDIS  AL +A++NA  +GV+ R    Q D F+ V G  FD IV+NPPYI    + 
Sbjct: 146 TGIGVDISPGALAVARANAQKHGVAARLALKQGDLFAPVAGQAFDAIVANPPYIPDGDIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +PR +L GG DGL  YR I      HL      +VE+G  Q   V  +   
Sbjct: 206 GLEPEVR-HEPRTALAGGADGLDFYRRIVAMAPGHLKDGAFLAVEVGCGQAAAVAGLAAV 264

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L +    +DY G +RV++  R
Sbjct: 265 SGLGVEAVIRDYAGIERVVVMRR 287


>gi|262170843|ref|ZP_06038521.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451]
 gi|261891919|gb|EEY37905.1| Polypeptide chain release factor methylase [Vibrio mimicus MB-451]
          Length = 286

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 91/263 (34%), Positives = 127/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L++     L   + R +  E I  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALVSLNALLARRMAGEPIAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 RVTGIDLRPEAAELAQENATRLSILNT-QFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L + G    E GY+Q   V  I  
Sbjct: 198 HLNLGDVR-FEPKSALVAEENGLADIRYISTHAPRFLLEGGWLLFEHGYDQGEAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY GNDRV L  
Sbjct: 257 ELGYQSVTTEQDYAGNDRVTLGQ 279


>gi|194436964|ref|ZP_03069063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 101-1]
 gi|253773789|ref|YP_003036620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161294|ref|YP_003044402.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|297517276|ref|ZP_06935662.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
 gi|300920410|ref|ZP_07136844.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           115-1]
 gi|300928242|ref|ZP_07143779.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           187-1]
 gi|301648135|ref|ZP_07247888.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           146-1]
 gi|307137827|ref|ZP_07497183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|331641742|ref|ZP_08342877.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H736]
 gi|194423947|gb|EDX39935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 101-1]
 gi|242376991|emb|CAQ31714.1| protein-(glutamine-N5) methyltransferase [Escherichia coli
           BL21(DE3)]
 gi|253324833|gb|ACT29435.1| modification methylase, HemK family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973195|gb|ACT38866.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|253977409|gb|ACT43079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|300412543|gb|EFJ95853.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           115-1]
 gi|300463711|gb|EFK27204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           187-1]
 gi|301073721|gb|EFK88527.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           146-1]
 gi|309701511|emb|CBJ00818.1| protein methyltransferase hemk (protein-glutamine N
           methyltransferase) [Escherichia coli ETEC H10407]
 gi|315615946|gb|EFU96572.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 3431]
 gi|323937933|gb|EGB34197.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520]
 gi|323962790|gb|EGB58368.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489]
 gi|323973390|gb|EGB68577.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007]
 gi|331038540|gb|EGI10760.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H736]
 gi|332342794|gb|AEE56128.1| protein-(glutamine-N5) methyltransferase HemK [Escherichia coli
           UMNK88]
          Length = 277

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIRILQSDWFSALAGQQFTMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|308271576|emb|CBX28184.1| Protein methyltransferase hemK [uncultured Desulfobacterium sp.]
          Length = 307

 Score =  285 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 5/262 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    G     + +  D  L+  +R    + I R +  E +  I+G ++F+++ L 
Sbjct: 44  AEILLAHTLGFKRIDLYLRHDQPLNVGERNLFKSLIRRRISKEPVAYIVGSKEFWSLELV 103

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S D   PRPETE LV+ AL   L + +     RIL+LGTG+GA+ LA+  ++P  +   
Sbjct: 104 VSKDVLIPRPETECLVEEAL-LVLDKDKVSAPKRILELGTGSGAIILAMATQNPDQQYFA 162

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL +A +NA   G+ E+ D     W S ++    LFD+I+SNPPYI    +  L
Sbjct: 163 SDISINALAVALNNARHLGLDEKIDLFCGSWVSPLKENNNLFDIIISNPPYIRRGDIKTL 222

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E+  F+P  +LDGG DGL+  + I     + LNK G   +EIGY+QK  V  I +   
Sbjct: 223 QPEINRFEPINALDGGEDGLACIKHIIKNAHKFLNKSGTLLLEIGYDQKKAVDEIIKETG 282

Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264
                +  KDY G DRV+   +
Sbjct: 283 RYAQASFRKDYSGFDRVVCAKK 304


>gi|323964711|gb|EGB60182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863]
 gi|327253902|gb|EGE65531.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli STEC_7v]
          Length = 277

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQS+WFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAIALAQRNAQ-NLAIKNIHILQSNWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V ++F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQVFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|215486444|ref|YP_002328875.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312966452|ref|ZP_07780674.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 2362-75]
 gi|215264516|emb|CAS08883.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli O127:H6 str. E2348/69]
 gi|312288905|gb|EFR16803.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 2362-75]
          Length = 277

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLTIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|302875889|ref|YP_003844522.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
 gi|307689322|ref|ZP_07631768.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
 gi|302578746|gb|ADL52758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cellulovorans 743B]
          Length = 283

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 86/263 (32%), Positives = 128/263 (48%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L  +       +I++    +D        N I    +   +  ILG   F  +
Sbjct: 23  REDALDLLSNILKKDRLYLIINGLDEVDKESEDIFFNFIEERGRKRPLQYILGNATFMEL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE+LV+  L +    I+K +   I D+ TGTGA+ +A+    P   
Sbjct: 83  SFKVKEGVLIPRADTEILVEEVLNY----IDKNNYKDICDVCTGTGAIGIAIGYHRPTTT 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIV 180
               DIS  A EIAK N     V +  +  +SD  S  EG    +DVIVSNPPYI + ++
Sbjct: 139 IDICDISEIAEEIAKENIFKLKVEKNVEFYRSDLLSFAEGLHKKYDVIVSNPPYIRTSVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V++++P ++LDGG DGL  YR I     + LNK GL + EIGY+Q  +V  + +
Sbjct: 199 EALMEDVKNYEPHLALDGGEDGLIFYRKITKDSCKFLNKGGLLAFEIGYDQGEEVSELLK 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   KD G NDRV+L  
Sbjct: 259 EYGFIDVIVKKDLGNNDRVVLGR 281


>gi|89054298|ref|YP_509749.1| HemK family modification methylase [Jannaschia sp. CCS1]
 gi|88863847|gb|ABD54724.1| [protein release factor]-glutamine N5-methyltransferase [Jannaschia
           sp. CCS1]
          Length = 276

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 96/260 (36%), Positives = 134/260 (51%), Gaps = 9/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVL-DDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A R++   +C    +SS Q+    D              A       + + +I+G  +F
Sbjct: 20  EAEREARLLMCHALKISSAQLYARLDETWPTGPPFQLFVEACEARKSRQPLSQIIGEVEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  R  ++SD   PRP+TE LVD AL+            R+LDLGTG+G V   LL E P
Sbjct: 80  YGRRFFVNSDVLTPRPDTETLVDQALSGGFE--------RVLDLGTGSGCVLATLLAERP 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              GVG D+S  ALE+A  N    GV +R   + SDWF +V+G FD+I+SNPPYI +  +
Sbjct: 132 GSNGVGTDLSQPALEVAARNVARQGVQDRAVLVHSDWFEAVQGQFDLILSNPPYIAAAEM 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRD++P ++L  G DGL+ YR I      HL   G   VEIG +Q   V  +F 
Sbjct: 192 RGLAPEVRDWEPHVALTPGGDGLTAYRIITAAGPMHLRAGGRLMVEIGLDQGAAVAELFR 251

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V   +D  G+DRV+
Sbjct: 252 AAGFGDVRITQDLSGHDRVV 271


>gi|152979100|ref|YP_001344729.1| HemK family modification methylase [Actinobacillus succinogenes
           130Z]
 gi|150840823|gb|ABR74794.1| modification methylase, HemK family [Actinobacillus succinogenes
           130Z]
          Length = 286

 Score =  285 bits (730), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 10/266 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  +  Q+I   D+VLD++    LT  + R    E +  ILG  +F
Sbjct: 24  LNAKFDANLLLQSVTQKTKSQIIAFSDTVLDEKTLQNLTALLNRRATGEPVAYILGETEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L +S  T  PRP+TE+LV+ AL     RI  +D V +LDLGTGTGA+ L+L KE  
Sbjct: 84  WTLSLKVSPHTLIPRPDTEILVERALE----RIPLKDGVSVLDLGTGTGAIALSLAKELK 139

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                +  +GVD+  +A+ +A+ NA  N + +  +  +S WF+++   FD++VSNPPYI+
Sbjct: 140 KRGQKYWVLGVDLMPEAVVLAQRNAERNQLDD-VEFRRSSWFNNIHETFDLVVSNPPYID 198

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        +VR F+P  +L     G +  R I +   R+LN  G   +E G+ Q   V 
Sbjct: 199 ADDAHLTQGDVR-FEPLSALIAEEQGYADLRHIIEQTPRYLNPQGWLLLEHGWRQGEKVR 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
             F+      V   KDYG N+RV L 
Sbjct: 258 SFFDENLWEKVATVKDYGDNERVTLA 283


>gi|322513488|ref|ZP_08066598.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976]
 gi|322120707|gb|EFX92591.1| protein methyltransferase HemK [Actinobacillus ureae ATCC 25976]
          Length = 290

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 93/266 (34%), Positives = 146/266 (54%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  S   +    ++ L   +   L   +   L+ E +  ILG ++F
Sbjct: 24  LHPKTDANILLQAVTKRSKSAIFAFSETELSQTEMSQLETLLTCRLQGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL ++  R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPHTLIPRPDTERLVEVALEWAYKRLEIQKTLQILDLGTGTGAIALALASELG 143

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G       LQSDWFS++E   F++IVSNPPYI+  
Sbjct: 144 DQAQIIGVDFKPEAVVLAETNRQNLGFQ-NVTFLQSDWFSALENQQFELIVSNPPYIDKQ 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    DGLS  + I     R+L  +G   +E G+ Q   V +I
Sbjct: 203 DENLKYGDVR-FEPLSALVAEQDGLSDLQKIIKNAPRYLANNGALMLEHGWQQAQAVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 262 FQQYQWDEIASFQDYGGNDRMTKAVR 287


>gi|323187442|gb|EFZ72751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli RN587/1]
          Length = 277

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|302879737|ref|YP_003848301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gallionella capsiferriformans ES-2]
 gi|302582526|gb|ADL56537.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gallionella capsiferriformans ES-2]
          Length = 288

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 130/259 (50%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +    L  V G++   ++  P+ +L  R+         R L  E I  +LG R+F+ 
Sbjct: 34  ARIEVQCLLQSVLGVNRAYLLTHPERILTVRETARYVELFARRLAGEPIAYLLGEREFFG 93

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TELLV+ AL              +LD+GTG+GA+ L++ +E P  
Sbjct: 94  LNFKVTPATLIPRPDTELLVEMALQHI------PAGGAVLDMGTGSGAIALSIARERPDA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + V VD S  AL +A  NA    +  R   L+SDWFS++ G  FD+I SNPPYIE+  V 
Sbjct: 148 RVVAVDASEAALIVAAENAQRLNLG-RVRLLRSDWFSALSGERFDLIASNPPYIENGDVH 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I      +LN  G    E GYNQ   V  + + 
Sbjct: 207 LSLGDVR-FEPLSALASGADGLDDIRRIIVEAKAYLNAGGWLMFEHGYNQAERVRGLLQD 265

Query: 242 RKLFLVNAFKDYGGNDRVL 260
              F V++  D  G +RV 
Sbjct: 266 AGFFGVSSVLDLSGIERVT 284


>gi|261253597|ref|ZP_05946170.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP
           102891]
 gi|260936988|gb|EEX92977.1| Polypeptide chain release factor methylase [Vibrio orientalis CIP
           102891]
          Length = 286

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 126/261 (48%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +LD +Q     + + R L  E +  I+G R+F+++ 
Sbjct: 28  LDAAVLLCHALDKPRSFLLTWPDKILDAQQLAAFDDLLQRRLTGEPVAYIVGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  ++          ILDLGTGTGA+ LAL  E P  + 
Sbjct: 88  LKVSPTTLIPRPDTERLVEIALDKAMQMDGD-----ILDLGTGTGAIALALASELPQRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
            G+D+   A ++A+SNA    +S     L   WF  +     F +IVSNPPYIE      
Sbjct: 143 TGIDLKQDAQQLAQSNASALNLSNT-QFLAGSWFEPLAAGTEFALIVSNPPYIEKEDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+  + IA     +L   G    E G+ Q   V  +  S 
Sbjct: 202 TQGDVR-FEPLSALVADEKGLADIKHIATQARDYLMDSGWLMFEHGFEQGEPVRELLRSL 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  +KDYG NDRV +  
Sbjct: 261 GYDQVATYKDYGDNDRVTIGQ 281


>gi|301017244|ref|ZP_07182025.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
 gi|300400375|gb|EFJ83913.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 69-1]
          Length = 277

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|315634082|ref|ZP_07889371.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393]
 gi|315477332|gb|EFU68075.1| protein methyltransferase HemK [Aggregatibacter segnis ATCC 33393]
          Length = 299

 Score =  285 bits (730), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++ +  LT  + R L+ E I  +LG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTQEKLTALLSRRLQGEPIAYLLGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESP- 120
            +S+ T  PRP+TE+LV+ A+A S   ++K        RILDLGTGTGA+ LAL  E   
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAISAEALQKCGQNSQCFRILDLGTGTGAIALALASELKP 145

Query: 121 -------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                    + +GVD+    + +A SNA  N +      LQS WF  + G FD+IVSNPP
Sbjct: 146 IAQKQQIQLEVIGVDVMPNVVALATSNAEKNQLG--VSFLQSHWFDKMTGTFDLIVSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L    +G +  R I     + +   G   VE G+ Q  
Sbjct: 204 YIDAKDEHLTQGDVR-FEPLSALVAEEEGYADLRHIIANAPKFMRTGGYLLVEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      +   +DYG N+RV L C
Sbjct: 263 KVRSIFQENFWTSIETLRDYGNNERVTLGC 292


>gi|86148711|ref|ZP_01066988.1| HemK protein [Vibrio sp. MED222]
 gi|85833504|gb|EAQ51685.1| HemK protein [Vibrio sp. MED222]
          Length = 290

 Score =  285 bits (729), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 86/266 (32%), Positives = 122/266 (45%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC         ++  P+  L   Q       + R L  E +  I+G R+F+++ L
Sbjct: 29  DAAVLLCHALDKPRSYLLTWPEKHLTSEQESEFHTLLKRRLTGEPVAYIVGEREFWSLPL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PRP+TE LV+ AL  +           ILDLGTGTGA+ LAL  E       
Sbjct: 89  KVSPSTLIPRPDTERLVEVALDKTY-----GKQGAILDLGTGTGAIALALASEMSNRPVT 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYIES 177
           G+D+  +A ++A  NA    ++     L   WF  +           F +IVSNPPYIE 
Sbjct: 144 GIDLRPEAQQLATENAQRLNIT-NATFLHGSWFEPLNSVNSEEKAVKFSLIVSNPPYIEK 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L     GL+  R I++     L  +G  + E GY+Q + V  
Sbjct: 203 NDPHLSQGDVR-FEPITALVAEEKGLADIRYISENARSFLENEGWLAFEHGYDQGLAVRE 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           I  +     V   KDYGGNDRV L  
Sbjct: 262 IMLALGYLDVVTEKDYGGNDRVTLGR 287


>gi|300939552|ref|ZP_07154209.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
 gi|300455556|gb|EFK19049.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 21-1]
          Length = 277

 Score =  285 bits (729), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDCMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIH 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|261496508|ref|ZP_05992888.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307711|gb|EEY09034.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
          Length = 363

 Score =  285 bits (729), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    ++VL +R+   L   + R  K E +  ILG+R+F
Sbjct: 99  LNAKFDANLLLQAVTKRSKSAIFAFSETVLSERELVELAEKLARRAKGEPMAYILGYREF 158

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S  T  PRP+TE LV+ AL ++  R+E + +++ILDLGTGTGA+ LAL  E  
Sbjct: 159 WSLPLKVSPATLIPRPDTERLVELALEYANKRLENQKMLQILDLGTGTGAIALALASELG 218

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
              + +GVD   +A+++A+ N    G+  +   LQSDWFSS+    FD+IVSNPPYI+  
Sbjct: 219 EKAQIIGVDFQNEAVQLAEENRQHLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDEA 277

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I      +L   G   +E  + Q   V  +
Sbjct: 278 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIQNAPLYLKPQGALMLEHSWQQGNAVRDL 336

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F+      V   +DY GNDRV 
Sbjct: 337 FDLNLWEQVETAQDYAGNDRVT 358


>gi|156741368|ref|YP_001431497.1| HemK family modification methylase [Roseiflexus castenholzii DSM
           13941]
 gi|156232696|gb|ABU57479.1| modification methylase, HemK family [Roseiflexus castenholzii DSM
           13941]
          Length = 289

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 4/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G S  +V+      + D         + R    E +  + G ++FY 
Sbjct: 28  PRLDAEILLAHTLGWSRARVLARLQETIPDDALQTFRALVERRAAREPVAYLTGRKEFYG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRPETE LVD+AL ++       D + I D+GTG+G + + L +  P  
Sbjct: 88  LEFVVDRRVLVPRPETEALVDAALEWARQHYSPHDTLLIADIGTGSGCIAIVLARHLPNA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                D+S  AL +A+ NA  +GV+ER   L  D  + +    D+ VSNPPY    I++ 
Sbjct: 148 VVYATDLSPDALAVARQNAELHGVAERITLLCGDLLAPLPQAVDLAVSNPPY---TILNE 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   VR  +P ++LDGG DGL+ YR +     + L   G   +EIG  Q   V  +    
Sbjct: 205 IDAGVRLHEPHLALDGGSDGLAVYRRLLATAPQALRPGGALMLEIGATQAEAVTALARQA 264

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                V+  +D  G DRV++
Sbjct: 265 FPAAAVHMLRDLAGWDRVVV 284


>gi|149907579|ref|ZP_01896326.1| peptide release factor-glutamine N5-methyltransferase [Moritella
           sp. PE36]
 gi|149809249|gb|EDM69178.1| peptide release factor-glutamine N5-methyltransferase [Moritella
           sp. PE36]
          Length = 279

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 90/264 (34%), Positives = 129/264 (48%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC +       +    D V+DD      T  I+R    E +  ILG+R+F++
Sbjct: 21  PKLDAEVILCFLLEKDRSYLFTWDDKVMDDDIIRRFTALIMRRQAGEPVAHILGYREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+DT  PRP+TE+LV+ ALA            ++LDLGTGTGA+ LAL  ESP  
Sbjct: 81  LELEVSADTLIPRPDTEILVEQALACM-----PTHACQVLDLGTGTGAIALALASESPQA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
               ++    A  +A+ N    G       LQ  WF  ++    FDVIVSNPPYI++   
Sbjct: 136 TVTAIEYQQGAAALARRNVKRCGFD--VTVLQGSWFEPLKASQRFDVIVSNPPYIDAHDP 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    +GL+  + I     + L  DG   VE G+ Q   V  +F 
Sbjct: 194 HLAMGDVR-FEPLTALVAADNGLADLKHIISQGYQFLTVDGWLLVEHGFEQGAAVRALFT 252

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V   KDYG NDR+ +  R
Sbjct: 253 ASNYHQVVTHKDYGNNDRITVGQR 276


>gi|145634874|ref|ZP_01790581.1| HemK [Haemophilus influenzae PittAA]
 gi|145267740|gb|EDK07737.1| HemK [Haemophilus influenzae PittAA]
          Length = 292

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 95/270 (35%), Positives = 143/270 (52%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG    Q++   D+ +D++ R  LT  + R L  E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLNGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKGTLIPRPDTEILVEKALQIALVKLEENPPHFRILDLGTGTGAIALALASELS 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +    + LQS WF ++ G FD+I SNP
Sbjct: 142 SICQKRQISLEIIGVDLMPDVVALAQSNAERNQL--NVEFLQSRWFENITGQFDLIASNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q 
Sbjct: 200 PYIDAQDEHLRQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNSNGALLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFLENHWEIVETVRDYGDNERVTLG 288


>gi|71278012|ref|YP_270225.1| HemK family modification methylase [Colwellia psychrerythraea 34H]
 gi|71143752|gb|AAZ24225.1| modification methylase, HemK family [Colwellia psychrerythraea 34H]
          Length = 285

 Score =  285 bits (729), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 83/259 (32%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V       ++  P+  + ++        + R +  E I  I+G ++F++
Sbjct: 24  AKLDAQILLCFVLDKERSYLLTWPEKEVTEQSEQQYLALLQRRIMGEPIAYIVGVQEFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S  T  PRP+TE+LV+  L        + D +  LDLGTGTGA+ LAL  E P +
Sbjct: 84  LPFRVSPATLIPRPDTEVLVELVLE----HFGELDTLHCLDLGTGTGAIALALASEQPNW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +   +D S  A+++AK NA    +S   +  QSDWF++V E  FDVIVSNPPYI+++   
Sbjct: 140 QIDAIDFSLDAVKLAKQNAQDLHLSH-VNIFQSDWFNAVNERKFDVIVSNPPYIDALDKH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR  +P  +L     GL   + IA    + LN  G    E G+ Q   V  I  +
Sbjct: 199 LSQGDVRC-EPESALVADEQGLGDIKHIAQQALKFLNTHGSLFFEHGFEQGQAVRNILTA 257

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +D+ G++R+ 
Sbjct: 258 LGYDNVQTVRDFNGHERIT 276


>gi|300906881|ref|ZP_07124555.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
 gi|301305582|ref|ZP_07211673.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           124-1]
 gi|300401314|gb|EFJ84852.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 84-1]
 gi|300839171|gb|EFK66931.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           124-1]
 gi|315254828|gb|EFU34796.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli MS 85-1]
          Length = 277

 Score =  284 bits (728), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL +E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|260767752|ref|ZP_05876687.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP
           102972]
 gi|260617261|gb|EEX42445.1| Polypeptide chain release factor methylase [Vibrio furnissii CIP
           102972]
          Length = 278

 Score =  284 bits (728), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +LDD         + R L  E +  I+G R+F+++ 
Sbjct: 13  LDAAVLLCHALDKPRSYLLTWPDKILDDTTHAAFDALLARRLTGEPVAYIIGEREFWSLP 72

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL  +     +     ILDLGTGTGA+ LAL  E P  + 
Sbjct: 73  LKVSPSTLIPRPDTERLVEVALEKA-----QTLDGDILDLGTGTGAIALALASELPQRRV 127

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           VG+D+  +A ++A  NA    ++     LQ  WF  +     F +IVSNPPYIE      
Sbjct: 128 VGIDLRDEAQQLASDNANRLHLT-NVTFLQGSWFEPLSHGTKFALIVSNPPYIEENDPHL 186

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P+ +L    +GL+  + I+D    +L   G  + E GY+Q   V  I ++ 
Sbjct: 187 AQGDVR-FEPKSALVAADNGLADIKYISDAGRDYLQSGGWLAFEHGYDQGASVRTIMQAL 245

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   +DY G+DRV L  
Sbjct: 246 GYQHVITEQDYAGHDRVTLGQ 266


>gi|82776552|ref|YP_402901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae Sd197]
 gi|309789160|ref|ZP_07683753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1617]
 gi|81240700|gb|ABB61410.1| possible protoporphyrinogen oxidase [Shigella dysenteriae Sd197]
 gi|308922914|gb|EFP68428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1617]
          Length = 277

 Score =  284 bits (728), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL +E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS + G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSELAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|330009866|ref|ZP_08306622.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3]
 gi|328534692|gb|EGF61257.1| protein-(glutamine-N5) methyltransferase [Klebsiella sp. MS 92-3]
          Length = 283

 Score =  284 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F++
Sbjct: 21  PRRDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRQRGEPIAHLVGQREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 81  LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA   G++      QSDWFS ++G  F  IVSNPPYI++    
Sbjct: 136 EVTAVDVMPDAVALALRNAEHLGIA-NVTISQSDWFSELDGQRFATIVSNPPYIDAADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275


>gi|262041833|ref|ZP_06015018.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259040825|gb|EEW41911.1| protein methyltransferase HemK [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 283

 Score =  284 bits (728), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F++
Sbjct: 21  PRRDAEILLGHVTGRARTWILAFGETTLSADEAARLEALLVRRHRGEPIAHLVGQREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 81  LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA   G++      QSDWFS+++G  F  IVSNPPYI++    
Sbjct: 136 EVTAVDVMPDAVALALRNAEHLGIA-NVTISQSDWFSALDGQRFATIVSNPPYIDAADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275


>gi|238651092|ref|YP_002916950.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia peacockii str. Rustic]
 gi|238625190|gb|ACR47896.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia peacockii str. Rustic]
          Length = 524

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 21/281 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLQHVINKPIEYLLINLDEQLNEAKIEAFEKLLARRLKHEPIVYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFS-----LPRIEKRDV---------------VRIL 102
               ++     PR +TE+LVD            P  ++ D                + IL
Sbjct: 84  REFIVNKHVLIPRSDTEVLVDVVFQCHSRESGNPEKKQPDPCFRGNDISENCNDKFLNIL 143

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           +LGTG+G + ++LL E      +  DIS  A++I KSNA    V++R   + S+WF ++E
Sbjct: 144 ELGTGSGCIAISLLCELQNANVIATDISLDAIDIIKSNAAKYEVTDRIQIIHSNWFENIE 203

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD IVSNPPYI       + +E  +++P I+L    DGL  Y  IA+   + L  +G
Sbjct: 204 TQKFDFIVSNPPYIAHSEKSEMAIETINYEPSIALFAEKDGLQAYFLIAENAKQFLKPNG 263

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +EIG+ Q+  V +IF      + + +KD  G+ RV+L 
Sbjct: 264 KIILEIGFKQEEAVTQIFLDHGYNIESVYKDLQGHSRVILL 304


>gi|26247535|ref|NP_753575.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli CFT073]
 gi|91210433|ref|YP_540419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UTI89]
 gi|110641442|ref|YP_669172.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 536]
 gi|117623430|ref|YP_852343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli APEC O1]
 gi|191170952|ref|ZP_03032503.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli F11]
 gi|218558141|ref|YP_002391054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|218689159|ref|YP_002397371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|227886366|ref|ZP_04004171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 83972]
 gi|237705174|ref|ZP_04535655.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
 gi|300971919|ref|ZP_07171707.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
 gi|300995965|ref|ZP_07181327.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           200-1]
 gi|301046861|ref|ZP_07193978.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           185-1]
 gi|331657263|ref|ZP_08358225.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA206]
 gi|26107936|gb|AAN80135.1|AE016759_409 Protein methyltransferase hemK [Escherichia coli CFT073]
 gi|91072007|gb|ABE06888.1| protein methyltransferase HemK [Escherichia coli UTI89]
 gi|110343034|gb|ABG69271.1| protein methyltransferase HemK [Escherichia coli 536]
 gi|115512554|gb|ABJ00629.1| protein methyltransferase HemK [Escherichia coli APEC O1]
 gi|190908684|gb|EDV68272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli F11]
 gi|218364910|emb|CAR02606.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli S88]
 gi|218426723|emb|CAR07560.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli ED1a]
 gi|226899931|gb|EEH86190.1| methyltransferase HemK [Escherichia sp. 3_2_53FAA]
 gi|227836570|gb|EEJ47036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 83972]
 gi|294492037|gb|ADE90793.1| protein methyltransferase HemK [Escherichia coli IHE3034]
 gi|300301229|gb|EFJ57614.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           185-1]
 gi|300304662|gb|EFJ59182.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           200-1]
 gi|300411044|gb|EFJ94582.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 45-1]
 gi|307553267|gb|ADN46042.1| protein methyltransferase HemK [Escherichia coli ABU 83972]
 gi|307627265|gb|ADN71569.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|315288567|gb|EFU47965.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           110-3]
 gi|315290790|gb|EFU50162.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           153-1]
 gi|315297346|gb|EFU56626.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 16-3]
 gi|323949671|gb|EGB45557.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252]
 gi|323953933|gb|EGB49732.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263]
 gi|324015638|gb|EGB84857.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 60-1]
 gi|331055511|gb|EGI27520.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA206]
          Length = 277

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIF 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|134301000|ref|YP_001114496.1| HemK family modification methylase [Desulfotomaculum reducens MI-1]
 gi|134053700|gb|ABO51671.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfotomaculum reducens MI-1]
          Length = 289

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 7/264 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L +VTG+    + +  +  L  +Q+      + R  + E +  ++G ++F    
Sbjct: 24  LDAQVLLSQVTGIDRTGLFMRQEQPLTPQQQEKYQILLERRAQGEPVAYLIGRKEFMGRD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++ D   PRP+TEL+V++A+ F         V   +D+GTG+GA+ ++L       + 
Sbjct: 84  FVVTPDVLIPRPDTELMVETAVKFFHKNSSCPPVA--VDVGTGSGAIAVSLASLVQELQV 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIESVIV 180
             +D+S  AL++A+ NA   G+ ER    Q +    +         +I +N PY+ S  +
Sbjct: 142 YAIDLSEAALKVARQNAERLGMKERVHFQQGNLLEPLLKTMGEEVSIITANLPYVPSGDI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V++F+P ++LDGG DGL  YR +     R L   GL  +EIG  Q     +I  
Sbjct: 202 PTLMRDVKEFEPHLALDGGPDGLDLYRLLIPQAYRLLQPGGLLLMEIGPGQGTGAKKILP 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +     KD  G +R++L  +
Sbjct: 262 A-GQWQGTVLKDLAGRERLVLAEK 284


>gi|317473031|ref|ZP_07932331.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp.
           3_2_56FAA]
 gi|316899460|gb|EFV21474.1| protein-(glutamine-N5) methyltransferase [Anaerostipes sp.
           3_2_56FAA]
          Length = 291

 Score =  284 bits (727), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 10/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           ++         LS  + +    + +++  +       + R + +   +  ++G +DF   
Sbjct: 38  EAWYLFSHCFSLSREEYLFSMTTPVEEGEELEQYKALLDRRISERIPLQYLIGTQDFMGY 97

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PR +TE ++++ +  + P         ILD+ TG+G + ++L        
Sbjct: 98  TFRVTPDVLIPRQDTESVIEAVVEGNYPHES------ILDVCTGSGCIAISLCLMLKPDV 151

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +G DI  KAL+IAK N        +F   +SD FS V+G FD+I+SNPPYI +     L
Sbjct: 152 CIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIISNPPYIPTKDCMEL 209

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV+D +P ++LDG  DGL  YR +A    +HLN  G    EIGY+Q   V  + E   
Sbjct: 210 MPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIGYDQGAAVKTMMEEAG 269

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KD  G DR+++  
Sbjct: 270 FSSVEIKKDLAGLDRMVIGT 289


>gi|227328866|ref|ZP_03832890.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 281

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L+  ++  LT  + R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKARTFLLAFGETELNAAEQQQLTELLARREQGEPIAYLIGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL         +    +LDLGTGTGA+ LAL  E    
Sbjct: 80  LPLAVSPATLIPRPDTECLVEQALLRL-----PQTPCAVLDLGTGTGAIALALASERRDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD+   A+ +A  NA   G+ +    L   W+S ++   F +I SNPPYI++  V 
Sbjct: 135 RVTGVDVQPDAVALATKNAQQLGL-DNASFLSGSWYSPLDHTRFALIASNPPYIDADDVH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  RTI +    +L+      +E G+ Q   V ++ ++
Sbjct: 194 LSQGDVR-FEPASALIAADNGLADLRTIIESAPHYLDDGAWLLLEHGWQQADMVRQLLQA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    +   +DYGGNDRV L  
Sbjct: 253 RGFTQIETCQDYGGNDRVSLGR 274


>gi|260583302|ref|ZP_05851077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae NT127]
 gi|260093662|gb|EEW77575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haemophilus influenzae NT127]
          Length = 292

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 147/270 (54%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDALVLLQHATGKLRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE+LV+ AL  +L ++E+     RILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTEILVEKALQIALEKLEENPPHFRILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMSDVVALAQSNAERNQL--NVQFLQSCWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L    +G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDVR-FEPLSALVANGEGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V   +DYG N+RV L 
Sbjct: 259 EKVRSIFLENYWEMVETVRDYGDNERVTLG 288


>gi|218783032|ref|YP_002434350.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
           AK-01]
 gi|218764416|gb|ACL06882.1| modification methylase, HemK family [Desulfatibacillum alkenivorans
           AK-01]
          Length = 289

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A R  +   L          +    D  L+  +       + R    E +  I+G RD
Sbjct: 24  VEAPRLSAEILLSHCLDYPRIHLYTRHDQPLNPEELGRFRELVKRRAAREPVAYIVGNRD 83

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L ++     PRPETE LV++AL         +  +R+LDLGTG+GA+ LAL  E 
Sbjct: 84  FWTLELDVNPSVLIPRPETETLVETALEVLNA---AQAPMRVLDLGTGSGAIILALASEK 140

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
           P    + VD S +ALE AK+NA  + +    D  +  WF +V     FD++VSNPPYI S
Sbjct: 141 PEHHYMAVDYSPQALETAKANAQKHNL--NVDFYKGSWFEAVRCLDRFDLVVSNPPYIPS 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV  ++P  +LDGG  G+ H   I +    HL   G   +E+G++QK  V +
Sbjct: 199 RDIPGLMPEVARYEPMSALDGGPQGMDHLALIIERAPEHLKPGGWLMLEMGFDQKELVEQ 258

Query: 238 I-FESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  E++    V   +D  G+ R  +  R
Sbjct: 259 VALETQAYENVRFVRDLAGHFRTAVMQR 286


>gi|331646530|ref|ZP_08347633.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M605]
 gi|281178398|dbj|BAI54728.1| putative methyltransferase [Escherichia coli SE15]
 gi|330911077|gb|EGH39587.1| methylase of polypeptide chain release factor [Escherichia coli
           AA86]
 gi|331045282|gb|EGI17409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M605]
          Length = 277

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|210623299|ref|ZP_03293716.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275]
 gi|210153700|gb|EEA84706.1| hypothetical protein CLOHIR_01666 [Clostridium hiranonis DSM 13275]
          Length = 293

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 5/267 (1%)

Query: 3   ALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              D    L +V G +    + ++ +  L   +   +            I  I+G R+F 
Sbjct: 26  PRLDIEVMLMKVLGDVDKLYLHMNLNKDLSQEKLDEIEKMAEERKSGRPIAYIVGNREFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +      PRP+TE LVD  +  +S    +++D + ILD+GTG+GA+ ++L     
Sbjct: 86  GLDFYVQEGVLIPRPDTETLVDEIIRIYSEEEYKQKDRIDILDIGTGSGAITVSLAYYIK 145

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIES 177
                  DIS  ALEI   NA TN V +R + ++SD FS++EG   + D+IVSNPPYI  
Sbjct: 146 NSFVKSFDISDIALEIGAKNAATNSVEDRTEFIKSDVFSALEGEGEILDIIVSNPPYIRK 205

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++  L  +V+D++P  +L+GG DGL  YR+I +G  ++L K G+ + E+G++Q  DV  
Sbjct: 206 DVIPTLHTQVKDYEPYNALEGGEDGLDFYRSITEGSVKYLKKGGILAYEVGHDQAEDVSN 265

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I ++     +   KD  G DRV++  +
Sbjct: 266 IMKNCGYEKIYTKKDLPGIDRVVIGTK 292


>gi|170768219|ref|ZP_02902672.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia albertii TW07627]
 gi|170122985|gb|EDS91916.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia albertii TW07627]
          Length = 277

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D QR  L   + R    E +  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTWILAFGETQLTDAQREQLDVLLARRRVGEPVAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +SS T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E    
Sbjct: 80  LRLFVSSATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERTDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD    A+E+AK NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 DITAVDRMPDAVELAKRNARHLAIK-NIHILQSDWFSALVGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLSALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+RV L  
Sbjct: 253 AGYCEVETCRDYGGNERVTLGR 274


>gi|239948111|ref|ZP_04699864.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922387|gb|EER22411.1| bifunctional methyltransferase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 420

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 86/286 (30%), Positives = 137/286 (47%), Gaps = 26/286 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++++ D  L++ +       + R LKHE I  I G ++FY+
Sbjct: 24  PQLEARILLRHVINKPIEYLLINLDEQLNEAEIEAFEKLLKRRLKHEPIAYITGVKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIE-------------------------KRD 97
               ++     PR +TE+LV   L    P +                            +
Sbjct: 84  REFIVNKHVLIPRSDTEVLVRIVLGLLKPSLRATERSVAISGILPEIASSTPMASSRNDE 143

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             +IL+LGTG+G + ++LL E P    +  DIS  A+EI KSNA    V +R   + SDW
Sbjct: 144 YTKILELGTGSGCIAISLLCELPNANVIATDISLDAIEIIKSNAAKYEVMDRLQVIHSDW 203

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F ++ +  FD+IVSNPPYI       + +E  +++P I+L    DGL  Y+TIA    + 
Sbjct: 204 FENLGKQKFDLIVSNPPYISHSEKSEMAIETINYEPSIALFAEEDGLQCYKTIAGNAKQF 263

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  +G   +EIG+ Q+  V +IF  +   + N ++D  G  RV+LF
Sbjct: 264 LKPNGKIILEIGFKQEEAVTQIFLDQSYNIENVYRDLQGYSRVILF 309


>gi|325263709|ref|ZP_08130442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. D5]
 gi|324030747|gb|EGB92029.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. D5]
          Length = 306

 Score =  283 bits (726), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 90/282 (31%), Positives = 132/282 (46%), Gaps = 25/282 (8%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  V+G+        PD +L + Q    T+ I R  +   +  + G ++F 
Sbjct: 21  DARLDAWYLLEYVSGVGRAMYYAMPDKLLTEAQEKQYTDYIERRAQRIPLQHLTGTQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------------RDVVRILD 103
            +   ++     PR +TE+LV+ AL  +   +E                   R   R+LD
Sbjct: 81  GLEFQVNEHVLIPRQDTEVLVEEALGAAEKYMEHMSCSFAGNRGAGDGCEDARKTFRLLD 140

Query: 104 LGTGTGAVCLALLKESP-----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + TG+G + L++L           KG+GVD+S KALE A++NA    +    D L SD F
Sbjct: 141 MCTGSGCILLSMLHYISKNKQMQSKGLGVDVSEKALETARANADALHIDA--DFLHSDLF 198

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             VEG F +IVSNPPYI + +++ L  EV+  DP ++LDG  DGL  YR I       L 
Sbjct: 199 EQVEGSFQMIVSNPPYIRTDVIETLQEEVKGHDPVLALDGRADGLYFYRKIVREAKHCLV 258

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             G    EIG +Q   V  +        V+  KD  G DRV+
Sbjct: 259 SGGSLLFEIGADQGEAVSAMMWEAGYSRVSVKKDLAGLDRVV 300


>gi|160878571|ref|YP_001557539.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium phytofermentans ISDg]
 gi|160427237|gb|ABX40800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium phytofermentans ISDg]
          Length = 279

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  VTGL     ++     +           + +   H  +  + G ++F 
Sbjct: 24  DAELDAWYLLEHVTGLRRIDYMIRAKEDMSIEVYERYQQLLKKRALHIPLQYLTGSQEFM 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE LV+  L  S  +        +L+L TG+G + ++L K    
Sbjct: 84  GLSFRVNESVLIPRQDTERLVEEVLKVSKDKD-------VLELCTGSGCIIISLAKLGNI 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS  A+++AK NA  N V      L SD FS+V G +DVIVSNPPYIES +++
Sbjct: 137 KNAVAVDISSDAIKVAKENAKDNEVL--VTYLLSDMFSNVSGTYDVIVSNPPYIESEVIE 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+D +PRI+LDG  DGL  YR +A    R LNK+G   +EIG NQ   +  +   
Sbjct: 195 GLMPEVKDHEPRIALDGDADGLKFYRILAKESGRFLNKNGRLYLEIGCNQAAFIGELLSQ 254

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +   KDY G DRV+
Sbjct: 255 NGFAQIKVVKDYAGLDRVV 273


>gi|282850387|ref|ZP_06259766.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella parvula ATCC 17745]
 gi|282579880|gb|EFB85284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella parvula ATCC 17745]
          Length = 289

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       + +  K   +  I+G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        K   VRILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG+DIS  AL +A+ N  +  +S+R   ++SD F ++ G    FD+IVSNPPYI +  
Sbjct: 143 SGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +V + +P I+L GG DGL  YR +A     +LN +G  + E+G++Q  +V  + 
Sbjct: 203 LKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRVAFEVGFDQAEEVGALL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           +       +    D GG++RV+  
Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285


>gi|317499019|ref|ZP_07957300.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893669|gb|EFV15870.1| (glutamine-N5) methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 283

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 130/262 (49%), Gaps = 6/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDF 60
            A  D+         +S    +      ++D++        I +  +H  +  ILG ++F
Sbjct: 21  NASGDAWYLFSECFHISMEDYLFGMTDEINDKEAEERYKELIQKRKEHVPLQYILGTQEF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 ++ D   PR +TE +++  L      ++    ++ILDL TG+G + ++L     
Sbjct: 81  MGYTFKVTPDVLIPRADTETVLEEVLLKVPQTLKN---LKILDLCTGSGCIAISLALILK 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               VG DIS KAL+IAK+N     ++     +QSD F +V G +D+I+SNPPYI +   
Sbjct: 138 PEVCVGTDISEKALKIAKANGE--NLAPMVKFIQSDLFENVTGSYDLIISNPPYITTEEC 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV+D++P ++LDG  DGL  Y+ I      +LN  G+ + EIGY+Q   V  + E
Sbjct: 196 GKLMPEVKDYEPMLALDGKEDGLYFYKKIIKEAKNYLNPQGMLAFEIGYDQGEAVKNLME 255

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
           ++    V   KD  G DR++  
Sbjct: 256 AQDFACVEIKKDLAGLDRLVFG 277


>gi|331662615|ref|ZP_08363538.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA143]
 gi|331061037|gb|EGI33001.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA143]
          Length = 277

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA  N   +    LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQ-NLAIKNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|269102027|ref|ZP_06154724.1| Polypeptide chain release factor methylase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268161925|gb|EEZ40421.1| Polypeptide chain release factor methylase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 282

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 128/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC         ++  P+  LD+ Q    ++ + R L  E +  I+G R+F++
Sbjct: 24  PQLDAAVLLCHALDKPRSYLLTWPEKELDESQFSLFSHCVSRRLAGEPVAYIIGVREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TE LV+ AL             ++LDLGTGTGA+ LA+  E P  
Sbjct: 84  LPLKVAPSTLIPRPDTERLVELALDKI-----PAQPCQVLDLGTGTGAIALAIASERPDI 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
              G+D+  +A ++A  N  T G       L   W+S +     F VIVSNPPYI+    
Sbjct: 139 TVTGIDLRQEAAQLATENGATLGF-NNVQFLAGSWYSPLAEIQQFAVIVSNPPYIDEQDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  + IA+   +HL  +G   +E G+ Q + V  I  
Sbjct: 198 HLDQGDVR-FEPKSALVAADNGLADIKIIAEQGRQHLQTNGWLLLEHGFEQGLAVREILT 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY G DRV L C
Sbjct: 257 KLGYQAVVTEQDYAGLDRVTLGC 279


>gi|293414489|ref|ZP_06657138.1| methyltransferase [Escherichia coli B185]
 gi|291434547|gb|EFF07520.1| methyltransferase [Escherichia coli B185]
          Length = 277

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGKGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|145298194|ref|YP_001141035.1| protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142850966|gb|ABO89287.1| Protein-glutamine N-methyltransferase HemK [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 289

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 88/270 (32%), Positives = 127/270 (47%), Gaps = 12/270 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC +       ++  P+  LD  Q+  L   + R L  E I  ++G R+F++
Sbjct: 20  PRADADVLLCHLLDCRRSYLMTWPERELDAAQQDRLQGWLTRRLAGEPIAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP 120
           + L +S  T  PRP+TE+LV+ ALA   P+    D     +LDLGTGTGA+ LAL  E P
Sbjct: 80  LPLKVSPATLIPRPDTEVLVEQALARLPPKPASPDQAPCALLDLGTGTGAIALALKSERP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPP 173
                 VD   +A  +A+ N+   G+          WF  +          F +IVSNPP
Sbjct: 140 DADVWAVDRMPEAAALARDNSAALGLP--ITVRDGSWFEPLCDPLLSQAPRFAMIVSNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI+         +VR F+PR +L     GL+  R I  G   HL   G   +E G+ Q  
Sbjct: 198 YIDGADPHLNKGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLCPGGWLLLEHGWQQGE 256

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V ++   +    V   +DYG N+RV L C
Sbjct: 257 AVRQLLLQQGFSRVETVRDYGDNERVTLGC 286


>gi|145637545|ref|ZP_01793202.1| HemK [Haemophilus influenzae PittHH]
 gi|145269231|gb|EDK09177.1| HemK [Haemophilus influenzae PittHH]
          Length = 292

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 98/270 (36%), Positives = 143/270 (52%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D    L  VTG S  Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+
Sbjct: 22  NSKIDVLVLLQHVTGKSRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L +S  T  PRP+TE LV+ AL  +L ++E+      ILDLGTGTGA+ LAL  E  
Sbjct: 82  SLPLNVSKSTLIPRPDTESLVEKALQIALEKLEENPPHFHILDLGTGTGAIALALASELA 141

Query: 121 FF--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
                     + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNP
Sbjct: 142 PICQKRHIPLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSSWFDNITGKFDLIVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +V  F+P  +L     G +  R I +  S +LN +G+  +E G+ Q 
Sbjct: 200 PYIDAQDEHLHQGDV-SFEPLSALVANDAGYADLRHIIELASSYLNSNGVLLLEHGWQQG 258

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V  IF      +V    DYG N+RV L 
Sbjct: 259 EKVRSIFLENYWEMVETVCDYGDNERVTLG 288


>gi|323704814|ref|ZP_08116391.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535740|gb|EGB25514.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 279

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 92/263 (34%), Positives = 137/263 (52%), Gaps = 10/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  + G+    +IV+ D  L +         +           I+G + F 
Sbjct: 20  EPRLEAEGLLSFLLGVGREYIIVNRDKELSENIFERYKGLLDLRKDGMPYQYIVGKKHFM 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S +   PR +TE+LV+  L     R++K DV  +LD+GTG+GA+ +++ K    
Sbjct: 80  GLIFKVSPNVLIPRNDTEVLVEEVLK----RLQKNDV--VLDIGTGSGAIAVSIAK-YKD 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            K   VDIS  AL +A+ NA  NGV ++   L+SD FSSV     FDVIVSNPPYI S  
Sbjct: 133 VKVYAVDISDDALSVARDNAYENGVLDKIVFLKSDLFSSVPKDVKFDVIVSNPPYIRSGD 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  EV+  +P+I+LDGG DGL  YR I      ++   G+ + E+GY++  DV RI 
Sbjct: 193 IDKLQEEVKK-EPKIALDGGEDGLLFYRKIVRDSKEYIKSSGIIAFEVGYDEAGDVSRIL 251

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  +   KD  G DRV+L 
Sbjct: 252 LDGGYGNIEIVKDLQGIDRVVLG 274


>gi|320181781|gb|EFW56691.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii ATCC 9905]
          Length = 277

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     V+   ++ L D Q   L   + R    E +  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|15801441|ref|NP_287458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 EDL933]
 gi|15830971|ref|NP_309744.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. Sakai]
 gi|168750772|ref|ZP_02775794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4113]
 gi|168758137|ref|ZP_02783144.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764381|ref|ZP_02789388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4501]
 gi|168771101|ref|ZP_02796108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4486]
 gi|168776895|ref|ZP_02801902.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4196]
 gi|168782568|ref|ZP_02807575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787716|ref|ZP_02812723.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC869]
 gi|168801525|ref|ZP_02826532.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC508]
 gi|195939100|ref|ZP_03084482.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC4024]
 gi|208806533|ref|ZP_03248870.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4206]
 gi|208815524|ref|ZP_03256703.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822687|ref|ZP_03263006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4042]
 gi|209396125|ref|YP_002270146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4115]
 gi|217328046|ref|ZP_03444128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. TW14588]
 gi|254792682|ref|YP_003077519.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|261224944|ref|ZP_05939225.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257199|ref|ZP_05949732.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291282237|ref|YP_003499055.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O55:H7 str. CB9615]
 gi|12514925|gb|AAG56070.1|AE005338_10 possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
           EDL933]
 gi|13361182|dbj|BAB35140.1| possible protoporphyrinogen oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187767812|gb|EDU31656.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4196]
 gi|188015064|gb|EDU53186.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4113]
 gi|189000050|gb|EDU69036.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354975|gb|EDU73394.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4401]
 gi|189360088|gb|EDU78507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365629|gb|EDU84045.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372472|gb|EDU90888.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC869]
 gi|189376321|gb|EDU94737.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC508]
 gi|208726334|gb|EDZ75935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4206]
 gi|208732172|gb|EDZ80860.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738172|gb|EDZ85855.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4042]
 gi|209157525|gb|ACI34958.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. EC4115]
 gi|209772518|gb|ACI84571.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772520|gb|ACI84572.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772522|gb|ACI84573.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772524|gb|ACI84574.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|209772526|gb|ACI84575.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|217318473|gb|EEC26899.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O157:H7 str. TW14588]
 gi|254592082|gb|ACT71443.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290762110|gb|ADD56071.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli O55:H7 str. CB9615]
 gi|320188004|gb|EFW62671.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC1212]
 gi|320643226|gb|EFX12427.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320648163|gb|EFX16839.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320653997|gb|EFX22071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659476|gb|EFX27045.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664613|gb|EFX31764.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326342760|gb|EGD66530.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. 1044]
 gi|326346387|gb|EGD70124.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. 1125]
          Length = 277

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL +E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|167745422|ref|ZP_02417549.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662]
 gi|167655143|gb|EDR99272.1| hypothetical protein ANACAC_00113 [Anaerostipes caccae DSM 14662]
          Length = 278

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 10/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           ++         LS  + +    + +++  +       + R + +   +  ++G +DF   
Sbjct: 25  EAWYLFSHCFSLSREEYLFSMTTPVEEGEELEQYKALLDRRISERIPLQYLIGTQDFMGY 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PR +TE ++++ +  + P         ILD+ TG+G + ++L        
Sbjct: 85  TFRVTPDVLIPRQDTESVIEAVVEGNYPHES------ILDVCTGSGCIAISLCLMLKPDV 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +G DI  KAL+IAK N        +F   +SD FS V+G FD+I+SNPPYI +     L
Sbjct: 139 CIGTDIDEKALKIAKENGRRLAPMVKFK--KSDLFSGVDGCFDLIISNPPYIPTKDCMEL 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV+D +P ++LDG  DGL  YR +A    +HLN  G    EIGY+Q   V  + E   
Sbjct: 197 MPEVKDHEPMLALDGREDGLYFYRKLAGTAPKHLNAGGTLVFEIGYDQGAAVKTMMEEAG 256

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
              V   KD  G DR+++  
Sbjct: 257 FSSVEIKKDLAGLDRMVIGT 276


>gi|260598214|ref|YP_003210785.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter turicensis z3032]
 gi|260217391|emb|CBA31447.1| Protein methyltransferase hemK [Cronobacter turicensis z3032]
          Length = 280

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 137/261 (52%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L D +   L   + R    E +  ++G R+F++
Sbjct: 20  PRRDAEILLGFVTGRTRTFILAFGETALTDDELARLETLLARRAAGEPVAYLIGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE LV+ ALA            RILDLGTGTGA+ LA+  E P  
Sbjct: 80  LPLEVSTATLIPRPDTECLVEQALARL-----PATACRILDLGTGTGAIALAIASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               +D+  +A+E+AK NA   G+ +    LQS WFS++ +  F +IVSNPPYI+     
Sbjct: 135 HVTALDVIPEAVELAKRNAQRLGI-DNVTVLQSHWFSALTDVRFSLIVSNPPYIDGDDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     GL+  +T+  G    L  +G   +E G+ Q   V  +FE 
Sbjct: 194 LTQGDVR-FEPKSALVAENAGLADLKTLIVGARHFLEDNGGLLLEHGWQQGGAVRELFER 252

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +DYGGN+R+ L 
Sbjct: 253 AGYQGVETCRDYGGNERLTLG 273


>gi|306813890|ref|ZP_07448063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|222033011|emb|CAP75751.1| Protein methyltransferase hemK [Escherichia coli LF82]
 gi|305852527|gb|EFM52975.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|312945842|gb|ADR26669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
 gi|320195778|gb|EFW70403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli WV_060327]
 gi|324005999|gb|EGB75218.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 57-2]
          Length = 277

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|261209905|ref|ZP_05924206.1| Polypeptide chain release factor methylase [Vibrio sp. RC341]
 gi|260841091|gb|EEX67616.1| Polypeptide chain release factor methylase [Vibrio sp. RC341]
          Length = 286

 Score =  283 bits (724), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L++     L   + R +  E I  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEEPALASLDALLARRMAGEPIAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALV-----DGELLDLGTGTGAIALALASELPQR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A  +A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 RVTGIDLRPEAAALAQENATRLAI-HNTQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q   V  +  
Sbjct: 198 HLSQGDVR-FEPQSALVAKENGLADIRYISTHAPHFLLDGGWLLFEHGYDQGAAVQMMLR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +DY GNDRV L  
Sbjct: 257 ELGYQNVTTEQDYAGNDRVTLGQ 279


>gi|329296265|ref|ZP_08253601.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Plautia stali symbiont]
          Length = 276

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DS L+D Q   L   + R ++ E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRSGLIAFDDSPLNDAQLAQLETLLARRVRGEPIAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE+LV+ AL              +LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLRVSDATLIPRPDTEVLVEQALLRL-----PATPSAVLDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G D    A+ +A+ NA    ++     + S WF  +    FD+IVSNPPYI++    
Sbjct: 135 QITGCDRIAAAVALAQDNAQRLHLT-NAGFVLSHWFDDLPAQRFDLIVSNPPYIDAADEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R I +     L   G   +E G+ Q   V  +   
Sbjct: 194 LQQGDVR-FEPLSALVAEEAGLADLRLIIERAPHWLQPQGWLLLEHGWQQGEAVRTLLTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN RV L  
Sbjct: 253 NGFLAVTTVEDYGGNPRVTLGQ 274


>gi|260779384|ref|ZP_05888276.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260605548|gb|EEX31843.1| Polypeptide chain release factor methylase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 289

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC         ++  PD +LD          + R +  E +  I G R+F+++ 
Sbjct: 28  LDAAVLLCHTLNKPRSFLLTWPDKILDSEAILAFEANLQRRINGEPVAYITGEREFWSLP 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE LV+ AL  ++      +   ILDLGTGTGA+ LA+  E P  + 
Sbjct: 88  LKVAPSTLIPRPDTERLVEIALEKAVE-----NQGDILDLGTGTGAIALAIASELPNRQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
            GVD+  +A ++A+SNA   G+      L   WF  V     F +IVSNPPYIE      
Sbjct: 143 WGVDLKQEAKQLAESNAEHLGIRNT-QFLSGSWFEPVGTGTKFALIVSNPPYIEEHDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L    +GL+  + I+      L  DG    E GY+Q + V  I  S 
Sbjct: 202 AQGDVR-FEPLSALVAKDNGLADIKHISSQALSFLQCDGWLMFEHGYDQGMAVREILGSL 260

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               +  +KDYG NDRV +  
Sbjct: 261 GYQNITTYKDYGENDRVTIGQ 281


>gi|297539751|ref|YP_003675520.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylotenera sp. 301]
 gi|297259098|gb|ADI30943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylotenera sp. 301]
          Length = 320

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 92/290 (31%), Positives = 130/290 (44%), Gaps = 31/290 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L  V  ++   +I   +  L           + R L  E +  ILG R+FY
Sbjct: 22  EAKLEAQLLLQHVLNVNRAWLIAHANDALQPNIHAAFEAQLKRRLAGEPMAYILGNREFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSL----------------------------PRI 93
            + L ++ DT  PRP+TE LV++ALA                                  
Sbjct: 82  GLDLLVTPDTLIPRPDTETLVEAALAKIPLSESTKNLSFRRKSESSGVEQHDYETLDSDF 141

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            + D +++LDLGTGTGA+ LA+ K  P      VD S  ALEIAK N+    +    +  
Sbjct: 142 RRNDDLKVLDLGTGTGAIALAIAKNRPKASITAVDASDAALEIAKQNSQQLSI-INVEFT 200

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            S+WF ++    FDVIVSNPPYIE         ++R F+P  +L  G+DGL   R I   
Sbjct: 201 LSNWFENLSNQRFDVIVSNPPYIEEHDAHLTQGDLR-FEPLSALASGMDGLDDIRQIIGD 259

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
              +L   G   +E GYNQ   V  +     L  +   KD G NDRV + 
Sbjct: 260 CLIYLKPQGWLMLEHGYNQAEQVADLMADAGLTNIETIKDLGNNDRVTIG 309


>gi|54309993|ref|YP_131013.1| putative HemK protein, methylase of polypeptide chain release
           factors [Photobacterium profundum SS9]
 gi|46914432|emb|CAG21211.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum SS9]
          Length = 282

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 9/261 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V       ++  P+    D Q       + R +  E +  ILG R+F+++ 
Sbjct: 26  LDAAVLLCHVLDKPRSYLLTWPEKAPSDEQFTLFEALLARRITGEPVAYILGEREFWSLP 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S  T  PRP+TE LV+ AL              +LDLGTGTGA+ LA+  E    + 
Sbjct: 86  LKVSPFTLIPRPDTERLVELALEKI-----PTQACTVLDLGTGTGAIALAIASERNDAQV 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
            G+D+  +A E+A  N     +      L   W++ +  + LF VIVSNPPYI++     
Sbjct: 141 TGIDLRPEAAELAAENGQRLNIQ-NVRFLAGSWYTPLASDELFSVIVSNPPYIDAADPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  +VR F+P+ +L    +GL+  + I++   +HL   G   +E G+ Q   V  I +  
Sbjct: 200 VLGDVR-FEPKTALVADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQEL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
              LV+  +DY G DRV L C
Sbjct: 259 GYHLVSTAQDYAGLDRVTLGC 279


>gi|220932632|ref|YP_002509540.1| modification methylase, HemK family [Halothermothrix orenii H 168]
 gi|219993942|gb|ACL70545.1| modification methylase, HemK family [Halothermothrix orenii H 168]
          Length = 285

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 134/267 (50%), Gaps = 7/267 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  +  +   Q+ V  D  L +++       ++   +   +  + G ++F 
Sbjct: 21  NPRLDAEVLLAHLLDMERIQLYVKYDLPLKNKEVEAYREMVINRARGIPVAYLTGHKEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++     PRPETE+LV+  +  SL + +  D   I+D+GTG+G + ++L    P 
Sbjct: 81  SLDFKVNRSVLIPRPETEILVEEII--SLCQAKNIDNPNIVDVGTGSGVIAVSLAHYLPG 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + +G+DIS KALE+A++N   + + ER   ++ +    +    +   +++VSNPPY+  
Sbjct: 139 ARVLGIDISDKALEVARTNIKRHNLGERVKVIKGNLLDPLIKMEKDNVNIVVSNPPYLTG 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L LEV  ++P  +LDGG DGL  YR +     + L   G+  +EIGY+Q   +  
Sbjct: 199 NEMKKLPLEV-TYEPSQALDGGADGLKIYRELIPRALKVLVPGGILGLEIGYHQADSIRD 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I        +   +DY G DRV++  +
Sbjct: 258 ILSGLPWGDIRVLQDYSGLDRVVIARK 284


>gi|153809901|ref|ZP_01962569.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174]
 gi|149834079|gb|EDM89159.1| hypothetical protein RUMOBE_00282 [Ruminococcus obeum ATCC 29174]
          Length = 300

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 13/272 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L     ++        D  LD +          +  +H  +  I G   F 
Sbjct: 26  EARLDAWLLLEYTADITRAWYYAHMDDGLDAKTEERYRTLCTKRAQHIPLQHITGRAYFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PR +TE+LV+ A+     R+   +  +ILD+ TG+G + L+LL E P 
Sbjct: 86  GYEFCVDERVLVPRQDTEVLVEEAI----SRMRNLEKPQILDMCTGSGCILLSLLLELPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNP 172
             G GVD+S  AL +AK N    G+ +R + +QSD FS+             +D+++SNP
Sbjct: 142 ALGTGVDVSEGALCVAKENRKRLGLEQRAELIQSDLFSADYFRKNSGNDHMEYDMLISNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +  ++ L  EVR  DP ++LDG  +GL  Y  I +    +L   G    EIG +Q 
Sbjct: 202 PYIRTEDIEGLMEEVRFHDPVLALDGKENGLYFYEKITEQAGTYLKPGGWLMYEIGCDQG 261

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +DV  I +      +   KD  G DRV+   +
Sbjct: 262 MDVSEIMKKNGFEQIEIKKDLAGLDRVVTGRK 293


>gi|88704042|ref|ZP_01101757.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71]
 gi|88701869|gb|EAQ98973.1| protoporphyrinogen oxidase [Congregibacter litoralis KT71]
          Length = 280

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   LC         ++  PD+ ++        + + +      +  +LG R+F+
Sbjct: 18  EAQREAQVLLCAALKKPRSYLVAWPDAEVEASAAEHYRHLLAQRASGIPVAYLLGEREFW 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++  T  PRP+TELLV+ AL   L          +LDLGTG+GA+ LAL  E P 
Sbjct: 78  SLTLRVNDATLIPRPDTELLVEQALKLDLS-----PGASVLDLGTGSGAIALALASERPR 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
           ++  GV+ S +ALEIA++N    G+ +     +SDWF++V G  FD+IVSNPPYI     
Sbjct: 133 WQITGVEHSPEALEIARTNGKRLGLKD-VAFHRSDWFTAVRGQRFDLIVSNPPYIAESDG 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L  G DGL   R I       L   G   +E G+ Q   V  +  
Sbjct: 192 HLSSGDLR-FEPRSALVSGADGLDDIRHIIAEAPTWLEPRGRLLLEHGFEQGSTVRALLS 250

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +R    V + +D  G++RV
Sbjct: 251 TRGFTAVASAEDLAGHERV 269


>gi|54298227|ref|YP_124596.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris]
 gi|53752012|emb|CAH13438.1| hypothetical protein lpp2285 [Legionella pneumophila str. Paris]
          Length = 287

 Score =  282 bits (722), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC V   +   +   PD+++   Q       I +  +   I  I G R+F+
Sbjct: 21  ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++ +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P 
Sbjct: 81  SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           +     D S +ALE+A+ NA T G+    +   S WF+++    +  IVSNPPYI     
Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFYHSCWFNNLPLKQYHAIVSNPPYIAENDP 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I  
Sbjct: 196 HLKQGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 ++ ++D  G+DRV    R
Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278


>gi|194434244|ref|ZP_03066510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1012]
 gi|194417475|gb|EDX33578.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 1012]
 gi|332092252|gb|EGI97329.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii 5216-82]
 gi|332098227|gb|EGJ03200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella dysenteriae 155-74]
          Length = 277

 Score =  282 bits (722), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     V+   ++ L D Q   L   + R    E +  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFVLAFGETQLTDEQLQQLDALLARRRTGEPVAHLTGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALERL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|331006966|ref|ZP_08330209.1| Methylase of polypeptide chain release factors [gamma
           proteobacterium IMCC1989]
 gi|330419228|gb|EGG93651.1| Methylase of polypeptide chain release factors [gamma
           proteobacterium IMCC1989]
          Length = 289

 Score =  282 bits (722), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      +   +   P+ +L   Q+      + R L  E I  I+G ++F++
Sbjct: 28  ARLDTEILLAHALEKNRTYLYTWPEKLLTVEQQTIFNQLMQRRLNGEPIAYIVGEKEFWS 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TE++V++AL+      E      ++DLGTGTGA+ LAL  E P +
Sbjct: 88  LALFVNESTLIPRPDTEVMVETALS-LFVDDEPEKQRSVVDLGTGTGAIALALASEKPCW 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
             +  D S  A E+AK N   + +      L SDW  +V+    D+IVSNPPYI      
Sbjct: 147 DIIAADNSVAACELAKKNQQRHQL-HNVTVLCSDWLVAVDVADVDLIVSNPPYIHENDPH 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+   TI       L   G   +E GY Q  +V  I + 
Sbjct: 206 LFQGDVR-FEPHSALTAKNNGLADIETIVLQAKHVLRPSGWLLIEHGYQQSAEVKEILQK 264

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
            +  L     D  G  R+ +  
Sbjct: 265 NQYTLCRTINDMAGQSRMTMGQ 286


>gi|327481906|gb|AEA85216.1| methyl transferase [Pseudomonas stutzeri DSM 4166]
          Length = 275

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G S+  +   P+  +           + R  + E +  ILG + F++
Sbjct: 19  ARLDAEWLLAAALGKSTSYLRTWPEREVPGDLAERFAADLARRRRGEPVAYILGRQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ DT  PRP+TELLV++AL     ++      R+LDLGTGTGA+ LAL  E P +
Sbjct: 79  LELEVAPDTLIPRPDTELLVETAL-----QLLPATPARVLDLGTGTGAIALALAAERPQW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD    A+ +A+ N +  G+       +SDWF+ V G  F +IVSNPPYI +    
Sbjct: 134 QVSGVDRIEAAVVLAERNRLRLGLG-NAHFARSDWFAEVTGERFQLIVSNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G+DGL   RTI      HL   G   +E G++Q   V  +  +
Sbjct: 193 LQQGDVR-FEPQSALVAGVDGLDDIRTIIAQAPAHLTAGGWLLLEHGFDQAPAVRSLMAA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                  + +D GG++RV L  
Sbjct: 252 HGFEACESRRDLGGHERVSLGR 273


>gi|327393651|dbj|BAK11073.1| protein methyltransferase HemK [Pantoea ananatis AJ13355]
          Length = 280

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   +++L + Q   L   + R  + E +  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TE+LV+ ALA            R+LD+GTG+GA+ LA+  E P  
Sbjct: 80  LPLQVNDATLIPRPDTEILVEQALAHL-----PESPARVLDMGTGSGAIALAIASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             +GVD    A+ +A+ NA    +      +QS WF+ +    FD+IVSNPPYI++    
Sbjct: 135 DVIGVDRIPAAVALAQRNAAHLAIP-NATFIQSHWFAQITPARFDLIVSNPPYIDANDRH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  R + +     L   G   +E G+ Q   V  + + 
Sbjct: 194 LNEGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V    DYGGN RV    
Sbjct: 253 HHYLSVATANDYGGNPRVTFGQ 274


>gi|259908617|ref|YP_002648973.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
 gi|224964239|emb|CAX55746.1| Protein methyltransferase [Erwinia pyrifoliae Ep1/96]
 gi|283478590|emb|CAY74506.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia pyrifoliae DSM 12163]
          Length = 281

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   DS LD      L   + R    E I  + G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRAWLIGFDDSELDAAALAQLDALLKRRTAGEPIAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L+++ DT  PRP++E+LV+ ALA             ILDLGTG+GA+ LAL  E P  
Sbjct: 80  LSLSVTPDTLIPRPDSEVLVEQALAHL-----PVAAGSILDLGTGSGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           + +G+D    A+ +A+ NA   G++     +  DWFS+++   F VIVSNPPYI++    
Sbjct: 135 QVIGIDRIPAAVALAQHNAARLGLT-NATFMPGDWFSALKQQQFAVIVSNPPYIDATDKH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+  + IA    ++L   G   +E G+ Q   + +I   
Sbjct: 194 LSQGDVR-FEPASALVAGDGGLADIKIIAAQAGQYLANGGWLLLEHGWQQGAQIRQILSD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +DYGGNDRV    +
Sbjct: 253 HHFCQIATCQDYGGNDRVTYGQK 275


>gi|332980840|ref|YP_004462281.1| protein-(glutamine-N5) methyltransferase [Mahella australiensis
           50-1 BON]
 gi|332698518|gb|AEE95459.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mahella australiensis 50-1 BON]
          Length = 281

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 6/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD    L  +  +    + +D    L   Q+      I +      +  +L    F +
Sbjct: 22  ARRDVEILLQELLDVDRSALYLDRSRALLPEQKIMFEQWIKQRCARMPLQYVLHKAWFMD 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETELLV+  +  +    E    +++LD+GTG+GA+ +AL +     
Sbjct: 82  MELYVDERVLIPRPETELLVEVVIKEAKGMSE---PLQVLDIGTGSGAIAIALARHMSGC 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VDIS  AL +A+ N     + +R   L+ + F  V+G+ FD+IVSNPPYI    + 
Sbjct: 139 RVWAVDISPDALAVARINVGKYSLQQRVTLLEGNLFEPVKGMAFDIIVSNPPYIVRDDLI 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P  +L+GG DGL  YR +       L   G  ++EIGY+Q   V  I ++
Sbjct: 199 ELEPEVRS-EPEPALNGGDDGLDFYRKLCH-AGELLKPHGFLALEIGYDQGQAVSDILKA 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KD+   DR++L  +
Sbjct: 257 CGFKDIQVLKDFANMDRIVLAHK 279


>gi|54295178|ref|YP_127593.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens]
 gi|53755010|emb|CAH16498.1| hypothetical protein lpl2258 [Legionella pneumophila str. Lens]
          Length = 287

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC V   +   +   PD+++   Q       I +  +   I  I G R+F+
Sbjct: 21  ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++ +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P 
Sbjct: 81  SLSLKVTPNVLIPRHETEHLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           ++    D S +ALE+A  NA T G+    +   S WF+++    +  IVSNPPYI     
Sbjct: 137 WRIDACDFSKEALELACYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I  
Sbjct: 196 HLKQGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISTILN 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 ++ ++D  G+DRV    R
Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278


>gi|257466435|ref|ZP_05630746.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917591|ref|ZP_07913831.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691466|gb|EFS28301.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium gonidiaformans ATCC 25563]
          Length = 368

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  D+      V  ++ + + +     + + Q+  L   +++  K  + +  ILG  +F
Sbjct: 105 NAKLDAEYIFADVLKVNRNMLSLYLHREISEEQKQELREKLIQRGKFRKPLQYILGKWEF 164

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y            PR +TE+LV+ A   SL    +++  +ILD+GTGTGA+ + L KE P
Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAITLAKEVP 220

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             + +G+DIS +AL +AK N            LQS+ F  +EG  FD+IVSNPPYI    
Sbjct: 221 EAEVLGIDISERALSLAKEN-KEYQFVRNVSFLQSNLFEKLEGKSFDIIVSNPPYIPQEE 279

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DG S Y+ I    + +LN+ G    E+GY Q   V +  
Sbjct: 280 YEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANGYLNEKGYLLFEVGYQQAEQVKQWM 339

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E  K   +   +DY G+ RV+L  +
Sbjct: 340 EEEKFEDLYIAEDYAGHQRVVLGRK 364


>gi|223935327|ref|ZP_03627245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [bacterium Ellin514]
 gi|223896211|gb|EEF62654.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [bacterium Ellin514]
          Length = 289

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 2/258 (0%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  V  +    + ++ +  L  ++   +   + R    E +  ILG   F  +   +
Sbjct: 29  ELMLAHVLKMKRMALYLNFEKPLGSKELDEVREMVRRRGGREPLQHILGSTCFCGLEFEV 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETELL +    F             LD GTG+G + + +  +SP  +   +
Sbjct: 89  NPKVLIPRPETELLAELGWQFLNSLPSSPTPPVALDYGTGSGCLAVTVAAKSPTAQLHAL 148

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185
           DIS  AL  A+ NA T+ +  R      D F++V     F++I+SNPPYI S  +  L  
Sbjct: 149 DISPDALATAQKNAATHQMGSRIQFHLGDGFAAVPPGLQFNLIISNPPYIASDEIATLQP 208

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DPR++LDGG DGL  YR +A   +  L  +G   +E G  Q   + ++FE  K  
Sbjct: 209 EVRDHDPRLALDGGRDGLDFYRRLAKEAAPRLLPNGKIMLEFGEGQAEAIQKLFEDEKWV 268

Query: 246 LVNAFKDYGGNDRVLLFC 263
           +     DY G  R+L+  
Sbjct: 269 VEGVKADYSGRLRILIAR 286


>gi|85711947|ref|ZP_01043001.1| HemK [Idiomarina baltica OS145]
 gi|85694133|gb|EAQ32077.1| HemK [Idiomarina baltica OS145]
          Length = 282

 Score =  282 bits (722), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  DS   L  +        +  P+  L D Q   L N + R  + E +  I+G R+F+
Sbjct: 24  DAQVDSRVLLSYLLDKPLSYFMTWPERRLTDAQFQQLQNWVARRCRGEPVAYIVGEREFW 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +   T  PRP+TE LV++AL+ SLP        R+LDLGTGTGA+ LAL  E P 
Sbjct: 84  SLSLAVDKSTLIPRPDTECLVETALSLSLPA-----DARVLDLGTGTGAIALALKSERPD 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
           ++   VD S  A+ +A+ NA   G++   + L S WF S+     +D+IVSNPPYI    
Sbjct: 139 WQVTAVDWSASAVSLAQRNARRLGLA--VEVLHSHWFDSLADRSVYDLIVSNPPYIAEDD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+PR +L     G++    IA+    +L  +G   +E G+ Q   V+ + 
Sbjct: 197 AHLAQGDVR-FEPRSALVAERAGIADLHHIAEQGHAYLKPNGWLLMEHGWQQAQAVITLL 255

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  VN ++DYG  +R+ 
Sbjct: 256 REFGYKNVNIWRDYGNVERIT 276


>gi|257482008|ref|ZP_05636049.1| hemK protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 277

 Score =  281 bits (721), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|153828622|ref|ZP_01981289.1| hemK protein [Vibrio cholerae 623-39]
 gi|148875893|gb|EDL74028.1| hemK protein [Vibrio cholerae 623-39]
          Length = 286

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|289647288|ref|ZP_06478631.1| hemK protein [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 277

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|257464823|ref|ZP_05629194.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor 202]
 gi|257450483|gb|EEV24526.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor 202]
          Length = 289

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  S   +    ++VL + +   L   + R  K E I  ILG ++F
Sbjct: 24  LNVKVDANVLLQAVTKRSKSAIFAFSETVLSEAELTELNALLARRAKGEPIAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S+ T  PRP+TE LV+ AL ++  R+  ++ ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLAVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELG 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
              + +GVD   +A+++A+ N    G  E+   LQSDWFS +E   FD+IVSNPPYI+  
Sbjct: 144 EKAQIIGVDKQAEAVQLAEQNRQNLGF-EQVRFLQSDWFSVLENHCFDLIVSNPPYIDKD 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I +    +L K G   +E G+ Q  DV +I
Sbjct: 203 DENLTKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAADVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   +  FKDYG  DR+    R
Sbjct: 262 FKQNQWDKIETFKDYGNQDRITKAER 287


>gi|238895294|ref|YP_002920029.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238547611|dbj|BAH63962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 282

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F++
Sbjct: 20  PRRDAEILLGHVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA    ++      QSDWFS++ G  F  IVSNPPYI++    
Sbjct: 135 EVTAVDVMPDAVALALRNAEHLSIA-NVTISQSDWFSALAGQRFATIVSNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 194 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274


>gi|157826556|ref|YP_001495620.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii OSU 85-389]
 gi|157801860|gb|ABV78583.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia bellii OSU 85-389]
          Length = 563

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 30/289 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L          ++ +P+  L+  +   +   + R LKH+ I  ILG ++FY
Sbjct: 23  NPKLEARILLQHAINKPYEYLLANPEKQLNQLEIEAVEKVLERRLKHKPIAYILGTKEFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------------------- 96
           +    ++     PR +TE+L+D  L +     +                           
Sbjct: 83  SREFIVNKHVLIPRNDTEILIDVVLQYHSQHFQYHSQHSLCHSSNGGNPDKKQLDSVVKP 142

Query: 97  ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                   IL+LGTG+G + ++LL E P  +    DIS  A+E+AKSNA+ + V++R   
Sbjct: 143 RNNIKSSNILELGTGSGCISISLLLELPNSQITATDISIDAIEVAKSNAIKHDVTDRLQI 202

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + S+WF ++ +  FD+IVSNPPYI       + +E  +++P I+L    DGL  Y+ IA+
Sbjct: 203 IHSNWFENIGKQKFDLIVSNPPYISINEKPEMAIETINYEPSIALFAEEDGLLSYKIIAE 262

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              + L ++G   +EIGY Q   V +IF      + N  +D   ++RV+
Sbjct: 263 NAKKFLKQNGKIILEIGYKQADQVSQIFLDHGYVIDNIHQDLQSHNRVI 311


>gi|229528815|ref|ZP_04418205.1| methylase of polypeptide chain release factors [Vibrio cholerae
           12129(1)]
 gi|229332589|gb|EEN98075.1| methylase of polypeptide chain release factors [Vibrio cholerae
           12129(1)]
          Length = 286

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|331682701|ref|ZP_08383320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H299]
 gi|331080332|gb|EGI51511.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H299]
          Length = 277

 Score =  281 bits (721), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDDQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|15677887|ref|NP_275055.1| hemK protein [Neisseria meningitidis MC58]
 gi|7227327|gb|AAF42384.1| hemK protein [Neisseria meningitidis MC58]
          Length = 423

 Score =  281 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 335 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416


>gi|254497856|ref|ZP_05110622.1| protein methyltransferase HemK [Legionella drancourtii LLAP12]
 gi|254352934|gb|EET11703.1| protein methyltransferase HemK [Legionella drancourtii LLAP12]
          Length = 261

 Score =  281 bits (721), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 132/264 (50%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   LC +   +   +   P+ +L D Q     N +    +   I  I G R+F+
Sbjct: 4   NPELEAEILLCYLLKKNRAYLFAHPEELLSDEQFATYQNLLAERAQGVPIAYITGEREFW 63

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++  T  PR ETELLV+ AL     ++       IL+LGTG+GA+ LAL KE P 
Sbjct: 64  SLNLKVNRHTLIPRHETELLVELALE----KLPNSPNTCILELGTGSGAIALALAKERPQ 119

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           +  V  D+S +AL IAK NA+ + +S       SDW+S++    +  I+SNPPYI     
Sbjct: 120 WHIVACDVSEEALLIAKENALHHQLS-NVTFYHSDWYSNIPQQQYHAIISNPPYIAEQDP 178

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L  G  GL+    I      +L  +G+  +E GY+QK++V  I  
Sbjct: 179 HLNEGDLR-FEPYNALASGQQGLADLLLIIKQGYDYLLPNGVLLLEHGYDQKLNVQAILI 237

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V ++KD  G+DRV    R
Sbjct: 238 ELGYKNVQSWKDIQGHDRVSGGWR 261


>gi|51474015|ref|YP_067772.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia typhi str. Wilmington]
 gi|81389917|sp|Q68VR6|HEMK_RICTY RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|51460327|gb|AAU04290.1| bifunctional methyltransferase [Rickettsia typhi str. Wilmington]
          Length = 518

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 15/273 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  VT      +++  +  L + +       + R L+HE I  I G ++FY+
Sbjct: 24  PELEARILLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLEHEPIAYITGIKEFYS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALA--------------FSLPRIEKRDVVRILDLGTGT 108
               ++     PR +TE+L+D  +                SL  ++      IL+LGTG+
Sbjct: 84  REFIVNKHVLIPRIDTEILIDVVIGLVVSRNDLNTCSKLKSLDSVKTIQHYNILELGTGS 143

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + ++LL E P    +  DIS  A+++AKSN + + V++R   + S+WF  + +  FD+
Sbjct: 144 GCIAISLLCELPNTSVIATDISVDAIKVAKSNTIKHNVTDRIQIIHSNWFEKLNKQKFDL 203

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI       + +E  +++P I+L    DGL  Y  IA    + L  +G   +EI
Sbjct: 204 IVSNPPYISHSEKLEMAIETINYEPHIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEI 263

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           G++Q   V +IF +    + + ++D   ++RV+
Sbjct: 264 GFSQAEKVCQIFLNYGYNIDHIYQDLQSHNRVI 296


>gi|145629733|ref|ZP_01785529.1| HemK [Haemophilus influenzae 22.1-21]
 gi|144978070|gb|EDJ87849.1| HemK [Haemophilus influenzae 22.1-21]
          Length = 264

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 97/263 (36%), Positives = 141/263 (53%), Gaps = 12/263 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L   TG    Q++   D+ +D++ R  LT  + R LK E I  ILG ++F+++ L +S
Sbjct: 1   MLLQYATGKPRTQILAFDDTEIDEKVRLKLTALLDRRLKGEPIAYILGEKEFWSLPLNVS 60

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALL--------KES 119
             T  PRP+TE+LV+ AL  SL ++E+     RILDLGTGTGA+ LAL         K  
Sbjct: 61  KGTLIPRPDTEVLVEKALQISLEKLEQNPPHFRILDLGTGTGAIALALASELFSICQKRQ 120

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              + +GVD+    + +A+SNA  N +      LQS WF ++ G FD+IVSNPPYI+   
Sbjct: 121 ISLEIIGVDLMPDVVALAQSNAERNQL--NVQFLQSRWFDNITGKFDLIVSNPPYIDVQD 178

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P  +L     G +  R I +    +LN +G   +E G+ Q   V  IF
Sbjct: 179 EHLHQGDVR-FEPLSALVANDAGYADLRYIIESAPNYLNFNGTLLLEHGWQQGEKVRSIF 237

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           +     +V   +DYG N+RV L 
Sbjct: 238 QENHWEMVETVRDYGDNERVTLG 260


>gi|328952116|ref|YP_004369450.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobacca acetoxidans DSM 11109]
 gi|328452440|gb|AEB08269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobacca acetoxidans DSM 11109]
          Length = 296

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 3/261 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    G S   + +  D  L + +       + R L HE    I G ++F+++   
Sbjct: 34  AEVLLAHCLGGSRLDLYLHYDQPLGENELSCYKKLLKRRLAHEPTQYITGRQEFWSLDFL 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETELLV+ A A+   +  +   VR++D+GTG+G + + L KE P  +   
Sbjct: 94  VTPAVLIPRPETELLVEVAAAYLQGQRAEETSVRLIDVGTGSGVLAVVLAKEHPQAQVTA 153

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +D S +AL +A+ NA  +GV ER   +  D  +++  E  FD+IVSN PY+ +     L 
Sbjct: 154 LDQSWEALCLARQNARRHGVEERIRFIMGDLLAALRPEAQFDLIVSNAPYVPTAEWLRLP 213

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            +++D++PR++LDGG DGL   R +      +L   GL ++E+G  Q   V ++      
Sbjct: 214 SDIKDYEPRLALDGGGDGLDVIRRLVQAAPGYLKAGGLLALEVGQGQSAAVEQLLAHGGA 273

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                  +D+    RV+   R
Sbjct: 274 FTPAEIRRDFQYIPRVVSARR 294


>gi|320637364|gb|EFX07171.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
          Length = 277

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL +E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALARERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A+ NA    +      LQSDWF ++ G  F +IVSNPPYI+     
Sbjct: 135 EITAVDRMPDAVALAQRNAQHLAIK-NIHILQSDWFRALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|330887863|gb|EGH20524.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 277

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++        T  + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFTGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|153213281|ref|ZP_01948693.1| hemK protein [Vibrio cholerae 1587]
 gi|124116081|gb|EAY34901.1| hemK protein [Vibrio cholerae 1587]
          Length = 286

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLDLLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPMR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|307256017|ref|ZP_07537805.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
 gi|306865439|gb|EFM97334.1| Protein hemK [Actinobacillus pleuropneumoniae serovar 10 str.
           D13039]
          Length = 296

 Score =  281 bits (720), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 96/266 (36%), Positives = 149/266 (56%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F
Sbjct: 24  LNPKTDTNLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S  T  PRP+TE LV+ AL ++  R++ +  +RILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPHTLIPRPDTECLVEVALDWAYKRLKIQQTLRILDLGTGTGAIALALASELG 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
              + +GVD   +A+++A++N    G S     LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 144 NNVQILGVDFKAEAVQLAETNRQNLGFS-NVSFLQSDWFSALENQQFDLIVSNPPYIDQQ 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    DGLS  + I      HLN +G   +E G+ Q   V +I
Sbjct: 203 DENLQYGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 262 FQQYQWDEIASFQDYGGNDRLTKAIR 287


>gi|16129175|ref|NP_415730.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. MG1655]
 gi|24112611|ref|NP_707121.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 301]
 gi|30062736|ref|NP_836907.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 2457T]
 gi|89108057|ref|AP_001837.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. W3110]
 gi|157160717|ref|YP_001458035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli HS]
 gi|170020421|ref|YP_001725375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ATCC 8739]
 gi|170080840|ref|YP_001730160.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187731012|ref|YP_001879995.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|188492205|ref|ZP_02999475.1| protein methyltransferase HemK [Escherichia coli 53638]
 gi|218553766|ref|YP_002386679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|238900443|ref|YP_002926239.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli BW2952]
 gi|256018538|ref|ZP_05432403.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|256023111|ref|ZP_05436976.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|260854873|ref|YP_003228764.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|260867617|ref|YP_003234019.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300816903|ref|ZP_07097123.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           107-1]
 gi|300951679|ref|ZP_07165503.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           116-1]
 gi|300955612|ref|ZP_07167969.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           175-1]
 gi|301029485|ref|ZP_07192567.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           196-1]
 gi|312971399|ref|ZP_07785574.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1827-70]
 gi|331652250|ref|ZP_08353269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M718]
 gi|331667596|ref|ZP_08368460.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA271]
 gi|332279598|ref|ZP_08392011.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
 gi|81170789|sp|P0ACC1|HEMK_ECOLI RecName: Full=Protein methyltransferase hemK; AltName:
           Full=M.EcoKHemKP; AltName: Full=Protein-(glutamine-N(5))
           MTase hemK; AltName: Full=Protein-glutamine
           N-methyltransferase hemK
 gi|81170790|sp|P0ACC2|HEMK_SHIFL RecName: Full=Protein methyltransferase hemK; AltName:
           Full=Protein-(glutamine-N(5)) MTase hemK; AltName:
           Full=Protein-glutamine N-methyltransferase hemK
 gi|50513699|pdb|1T43|A Chain A, Crystal Structure Analysis Of E.Coli Protein
           (N5)-Glutamine Methyltransferase (Hemk)
 gi|968931|gb|AAC43438.1| possible protoporphyrinogen oxidase [Escherichia coli]
 gi|1651602|dbj|BAA36070.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K12 substr. W3110]
 gi|1787463|gb|AAC74296.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli str. K-12 substr. MG1655]
 gi|18376673|dbj|BAB84109.1| protein-(glutamine-N5) methyl transferase [Escherichia coli]
 gi|24051516|gb|AAN42828.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str. 301]
 gi|30040984|gb|AAP16714.1| possible protoporphyrinogen oxidase [Shigella flexneri 2a str.
           2457T]
 gi|157066397|gb|ABV05652.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli HS]
 gi|169755349|gb|ACA78048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli ATCC 8739]
 gi|169888675|gb|ACB02382.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|187428004|gb|ACD07278.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii CDC 3083-94]
 gi|188487404|gb|EDU62507.1| protein methyltransferase HemK [Escherichia coli 53638]
 gi|218360534|emb|CAQ98092.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli IAI1]
 gi|238861844|gb|ACR63842.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli BW2952]
 gi|257753522|dbj|BAI25024.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|257763973|dbj|BAI35468.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|260449653|gb|ACX40075.1| modification methylase, HemK family [Escherichia coli DH1]
 gi|281600636|gb|ADA73620.1| Protein methyltransferase hemK [Shigella flexneri 2002017]
 gi|299877628|gb|EFI85839.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           196-1]
 gi|300317505|gb|EFJ67289.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           175-1]
 gi|300449125|gb|EFK12745.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           116-1]
 gi|300530677|gb|EFK51739.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           107-1]
 gi|310335996|gb|EFQ01196.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1827-70]
 gi|313649401|gb|EFS13832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2a str. 2457T]
 gi|315135848|dbj|BAJ43007.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli DH1]
 gi|320174902|gb|EFW50021.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae CDC 74-1112]
 gi|320185615|gb|EFW60377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri CDC 796-83]
 gi|323153189|gb|EFZ39451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli EPECa14]
 gi|323179273|gb|EFZ64843.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1180]
 gi|323942491|gb|EGB38659.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482]
 gi|323947505|gb|EGB43509.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120]
 gi|324117240|gb|EGC11147.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167]
 gi|331050528|gb|EGI22586.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli M718]
 gi|331065181|gb|EGI37076.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli TA271]
 gi|332101950|gb|EGJ05296.1| protoporphyrinogen oxidase hemK [Shigella sp. D9]
 gi|332757865|gb|EGJ88192.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 4343-70]
 gi|332759447|gb|EGJ89755.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2747-71]
 gi|332760306|gb|EGJ90596.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-671]
 gi|332767446|gb|EGJ97640.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri 2930-71]
 gi|333005051|gb|EGK24571.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri VA-6]
 gi|333005663|gb|EGK25181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-218]
 gi|333007545|gb|EGK27023.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-272]
 gi|333019222|gb|EGK38509.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-304]
 gi|333019925|gb|EGK39197.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella flexneri K-227]
          Length = 277

 Score =  281 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|241759168|ref|ZP_04757276.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria flavescens SK114]
 gi|241320587|gb|EER56864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria flavescens SK114]
          Length = 270

 Score =  281 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 12/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   +G +  Q++      + D  R        R LK E +  +LG R+FY 
Sbjct: 13  PKNEARMLLKYASGYTRVQLLTRGGEEIPDEVRQRADRLAQRRLKGEPMAYLLGEREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++     PRPETE LV++ L    P+       R+ DLGTG+GA+ + +  E    
Sbjct: 73  RRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  AL+ A+ NA   G   + +  Q  WF      EG +DVIVSNPPYIE+  
Sbjct: 127 DVRASDISTGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I 
Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  V   +D  G DRV L  
Sbjct: 244 LKNGFAEVATEQDLAGLDRVTLGR 267


>gi|193213806|ref|YP_001995005.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroherpeton thalassium ATCC 35110]
 gi|193087283|gb|ACF12558.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroherpeton thalassium ATCC 35110]
          Length = 294

 Score =  281 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 6/266 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L     L    + +  D  + +++R        R L+ E +  I+G +DF+
Sbjct: 27  DARLNAELLLAHTLNLKRMDLYLKFDMPVTEQERQTFRELCKRRLEGEPVQYIIGNQDFF 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L + S    PRPETELLV+ AL          + ++ILD+GTG+G + LA   +   
Sbjct: 87  GLTLDVDSRVLIPRPETELLVEEALNSLSQLDFGDEKIKILDIGTGSGCIALAFASQLSN 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176
            + + VD+S +AL +AK N+  N +      L  D  S+     V G + +I+SNPPYI 
Sbjct: 147 AEILAVDVSSEALALAKQNSEKNKLKSEVRFLNIDMLSAHFYDEVPGSYHLIISNPPYIP 206

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               D L +EVR+F+P I+L     G   Y  IA   +R L  +GL   E+  +    V 
Sbjct: 207 IAERDSLQVEVRNFEPAIALFV-QQGFEFYEKIAQEAARLLKPNGLLCFELHADGATKVN 265

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
            I +      +   +DY G  R+ + 
Sbjct: 266 IILKKNGFEQIRFVQDYAGFSRIAIA 291


>gi|296134390|ref|YP_003641637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermincola sp. JR]
 gi|296032968|gb|ADG83736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermincola potens JR]
          Length = 283

 Score =  281 bits (720), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 13/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   D+   L  + G+   ++ ++ ++VL D Q     N + R    E +  + G ++F 
Sbjct: 23  EPRLDAEVLLSYLLGMDRAKLYLNREAVLSDEQIGRFRNLVERRGLREPVAYLTGTKEFM 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++S    PRP+TE+LV+  LA             ++D+GTG+GA+ ++     P 
Sbjct: 83  SLDFKVNSSVLIPRPDTEILVEEILAI--------KPALMVDVGTGSGAIAISAAYYLPE 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            +    DIS +AL +A+ NA+  GVS+R + +Q +  +          D+I +N PYI  
Sbjct: 135 TRVFATDISPEALNLARENAINLGVSDRIEFVQGNLLTPFINRPNFRVDLIAANLPYIPG 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++  L  EVR ++P ++LDGG +GL  Y+++   V R L   G   +EIGYNQ   +  
Sbjct: 195 EVLKELPDEVRKYEPALALDGGCEGLDLYKSLIGQVPRVLKSGGRLLMEIGYNQSGLLAD 254

Query: 238 IFESRK-LFLVNAFKDYGGNDRVL 260
                     +   KD  G DRV+
Sbjct: 255 FLTQIPCFSGIRVIKDLSGRDRVV 278


>gi|222087302|ref|YP_002545839.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
 gi|221724750|gb|ACM27906.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
          Length = 291

 Score =  281 bits (719), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 119/262 (45%), Positives = 165/262 (62%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   +  +  LSS +++      +   +      AI R L HE +HRILG R+FY
Sbjct: 27  DPATEARILVGGLLQLSSTELVTRGAEAVAPDRVEAARAAIARRLNHEPVHRILGEREFY 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + + LS  T EPRP+TE+LVD+ L  +         + +LD+GTGTGA+CLALL E   
Sbjct: 87  GLPMALSPATLEPRPDTEILVDTVLPHARRLATDHGTIHLLDMGTGTGAICLALLHECQQ 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G DIS +ALE A++NA  NG++ RFDT+Q  WF ++ G F VIVSNPPYIES ++ 
Sbjct: 147 AMGIGSDISGEALETARANAARNGLAARFDTVQGSWFEAIHGRFHVIVSNPPYIESSVIS 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++FDP  +LDGG+DGL  YR IA   +R L++DG+  VEIGY+Q+  V  +FE 
Sbjct: 207 TLAPEVKNFDPPAALDGGLDGLDAYRAIAKDAARFLHQDGIVGVEIGYDQRKTVTSVFEG 266

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
              FL+ A +DYG NDRVL+F 
Sbjct: 267 AGFFLIEAARDYGHNDRVLVFQ 288


>gi|82544334|ref|YP_408281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii Sb227]
 gi|157156593|ref|YP_001462465.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli E24377A]
 gi|300921822|ref|ZP_07137979.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           182-1]
 gi|301327072|ref|ZP_07220354.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
 gi|81245745|gb|ABB66453.1| possible protoporphyrinogen oxidase [Shigella boydii Sb227]
 gi|157078623|gb|ABV18331.1| protein methyltransferase HemK [Escherichia coli E24377A]
 gi|300421748|gb|EFK05059.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           182-1]
 gi|300846325|gb|EFK74085.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS 78-1]
 gi|332094776|gb|EGI99820.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella boydii 3594-74]
          Length = 277

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|16125128|ref|NP_419692.1| hemK family protein [Caulobacter crescentus CB15]
 gi|13422136|gb|AAK22860.1| hemK family protein [Caulobacter crescentus CB15]
          Length = 317

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   D+   L    G++  +++ DP   L   Q   L + + R  + E +  I+G + F+
Sbjct: 51  QPSIDARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFW 110

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ +   PRPETE++VD  L        +     +LDLG G+G + LA+L E P 
Sbjct: 111 KILLQVNKNVLTPRPETEVIVDEVLK----AFPEHMAFSMLDLGVGSGTILLAVLAERPA 166

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            KG+G+D S +AL +A+ NA    ++ R   L  DW + +    FD++VSNPPYI + ++
Sbjct: 167 AKGLGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVI 226

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR  +PR++LDGG DGL+ YR +A  + R L   GL +VEIGY+Q   V  +F 
Sbjct: 227 DTLEPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFR 286

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V   KD   +DRV+L  +
Sbjct: 287 AAGATEVRTVKDLSTHDRVVLGVK 310


>gi|313893578|ref|ZP_07827147.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. oral taxon 158 str. F0412]
 gi|313441849|gb|EFR60272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. oral taxon 158 str. F0412]
          Length = 289

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       + +  K  S+  I G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQEELDAFRPLVQQRAKGYSVASITGQKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        +   +RILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTESLIEHVLD----TYSEDCNIRILDICTGPGTILLSLLHYLPNA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG+DIS  AL +A+ NA +  +++R +  +SD FS++ G    FD+IVSNPPYI +  
Sbjct: 143 VGVGLDISTDALPLARENADSFNLTKRVEFKESDMFSALRGTDEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V + +P I+L GG DGL  YR +A     +L   G  + E+GY+Q   V ++ 
Sbjct: 203 AKMLSQDVLN-EPHIALFGGEDGLVFYRILAKTCGAYLATSGRVAFEVGYDQAEAVRKLL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           E+      +    D GG++RV+  
Sbjct: 262 EATGQYSNIQFIADLGGHNRVVTA 285


>gi|294793890|ref|ZP_06759027.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 3_1_44]
 gi|294455460|gb|EFG23832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 3_1_44]
          Length = 289

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       + +  K   +  I+G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        K   VRILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG++IS  AL +A+ N     +++R   L+SD FS++ G    FD+IVSNPPYI +  
Sbjct: 143 CGVGLEISTDALLVAEENGERFNLNDRVQFLESDMFSALAGNAEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V + +P I+L GG DGL  YR +A     +LN +G    E+G++Q  +V  + 
Sbjct: 203 AKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRVVFEVGFDQAEEVGALL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           +       +    D GG++RV+  
Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285


>gi|52842547|ref|YP_096346.1| protein methyltransferase HemK [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629658|gb|AAU28399.1| protein methyltransferase HemK [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 287

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC V   +   +   PD+++   Q       I +  +   I  I G R+F+
Sbjct: 21  ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++ +   PR ETE LV+ AL      I  ++ V +LDLGTG+GA+ LAL KE P 
Sbjct: 81  SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLDLGTGSGAIALALAKERPL 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           +     D S +ALE+A+ NA T G+    +   S WF+++    +  IVSNPPYI     
Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I  
Sbjct: 196 HLKHGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 ++ ++D  G+DRV    R
Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278


>gi|254787711|ref|YP_003075140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Teredinibacter turnerae T7901]
 gi|237685052|gb|ACR12316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Teredinibacter turnerae T7901]
          Length = 277

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G S   +   P+  L + ++        R    E +  ILG R+F++
Sbjct: 21  ARLDTELLLAAVLGKSRTWLFTWPEYNLSEEEQARFAEFFARRRAGEPVAYILGEREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   + + T  PRP+TELLV   +   +P+       R+LDLGTGTGA+ LAL  E    
Sbjct: 81  LPFFVDASTLIPRPDTELLVSCIVDLPIPK------QRVLDLGTGTGAIALALASELSDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V VD S +A+++A  N    G +   + LQSDW+S++ +  FDVIV+NPPYI+     
Sbjct: 135 VIVAVDKSPEAVKLALRNQARLGFT-NVEILQSDWYSALGDQHFDVIVANPPYIDEKDTH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  R I      HLN  G   +E G+ Q   V  I   
Sbjct: 194 LGRGDVR-FEPRSALVAADKGLADIRHIIVHAVEHLNDGGTLLIEHGWQQDERVAEILAG 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    +  F+D GGN+R  L  
Sbjct: 253 KGFLEIRTFQDLGGNNRATLGR 274


>gi|88192213|pdb|2B3T|A Chain A, Molecular Basis For Bacterial Class 1 Release Factor
           Methylation By Prmc
          Length = 276

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|303250477|ref|ZP_07336674.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|307251518|ref|ZP_07533425.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650465|gb|EFL80624.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|306860982|gb|EFM92988.1| hypothetical protein appser6_420 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 290

 Score =  281 bits (719), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 93/266 (34%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F
Sbjct: 24  LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +I
Sbjct: 203 DKNLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 262 FKQYQWDEIESFQDYGGNDRLTKAVR 287


>gi|110805217|ref|YP_688737.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 5 str. 8401]
 gi|110614765|gb|ABF03432.1| possible protoporphyrinogen oxidase [Shigella flexneri 5 str. 8401]
          Length = 277

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I       L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIQQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|260438935|ref|ZP_05792751.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus
           DSM 2876]
 gi|292808586|gb|EFF67791.1| protein-(glutamine-N5) methyltransferase [Butyrivibrio crossotus
           DSM 2876]
          Length = 276

 Score =  281 bits (719), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 139/263 (52%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+        G++    ++D ++  +     F  + I + L H  +  ILG   F 
Sbjct: 21  EAGNDAWLLFSEAFGMTRTDYLIDKNAECNAGHIPFFDSCIEKRLAHIPVQYILGKAYFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++++   PR +TE+LV   L ++      +D  +ILD+ TG+G + ++L      
Sbjct: 81  GYEFEVNNNVLIPRFDTEVLVSEVLKYT------QDDFKILDMCTGSGCIAISLSL-LSG 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  GVDIS KAL +A  N V N  +++   ++S+ F +++G F++IVSNPPYI +  + 
Sbjct: 134 AEVTGVDISEKALAVADYNKVINK-ADKVTFVKSNMFENIDGAFNLIVSNPPYIPTKDIF 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++ +P ++L+G  DGL  YR +A+  +++L  +G   +EIGYNQ  DV  +   
Sbjct: 193 ELEHEVKNEEPMLALNGHDDGLFFYRILAEESAKYLRHNGGIFMEIGYNQAEDVRNLLIK 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                ++  KD  G DRV+   R
Sbjct: 253 NNFTDISVIKDLAGLDRVVCGWR 275


>gi|254226891|ref|ZP_04920459.1| hemK protein [Vibrio cholerae V51]
 gi|125620573|gb|EAZ48939.1| hemK protein [Vibrio cholerae V51]
          Length = 286

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|227824240|ref|ZP_03989072.1| modification methylase [Acidaminococcus sp. D21]
 gi|226904739|gb|EEH90657.1| modification methylase [Acidaminococcus sp. D21]
          Length = 298

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 135/264 (51%), Gaps = 8/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V G+    +    D  L+  +       ++R  K E +  ILG + F +
Sbjct: 27  PRLDAELLLCAVLGMRRIDLYTHFDQPLEKEELAAYRGYVMRRAKREPVAYILGEKGFLD 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++DT  PRPETELLV+  LA     +     + IL+LG G+GA+ ++LL +    
Sbjct: 87  YTFAVTADTLIPRPETELLVEKILA-----VTADGPLDILELGVGSGAILISLLLKRKEA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +G+GVDIS  A+ +A+ NA   GV++R + + SD F  V     FD+IVSNPPYI    +
Sbjct: 142 QGLGVDISEGAVAVARKNAKNLGVTDRSEIIVSDLFEKVPEGRKFDLIVSNPPYIPKKDL 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR  +P  +LDGG DGL  YR I      +L +DGL + E+G  +      +  
Sbjct: 202 AGLSPEVRK-EPLGALDGGEDGLDFYRRIVREGMAYLKEDGLFAFEVGIGEGAAAADLLV 260

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                    F DY G DR++L  +
Sbjct: 261 QNGCGAARVFLDYAGIDRMVLAAK 284


>gi|313107326|ref|ZP_07793521.1| putative methyl transferase [Pseudomonas aeruginosa 39016]
 gi|310880023|gb|EFQ38617.1| putative methyl transferase [Pseudomonas aeruginosa 39016]
          Length = 276

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV+     +           +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVE-----TALATLAAGTATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I     RHL  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V+  +D GGN+R+ L  
Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273


>gi|121727186|ref|ZP_01680353.1| hemK protein [Vibrio cholerae V52]
 gi|147674049|ref|YP_001217694.1| hemK protein [Vibrio cholerae O395]
 gi|262167527|ref|ZP_06035233.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27]
 gi|121630431|gb|EAX62824.1| hemK protein [Vibrio cholerae V52]
 gi|146315932|gb|ABQ20471.1| hemK protein [Vibrio cholerae O395]
 gi|227014074|gb|ACP10284.1| hemK protein [Vibrio cholerae O395]
 gi|262024099|gb|EEY42794.1| Polypeptide chain release factor methylase [Vibrio cholerae RC27]
          Length = 286

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L  DG    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMS 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIMTEQDYAGHDRVTLGQ 279


>gi|15599859|ref|NP_253353.1| methyl transferase [Pseudomonas aeruginosa PAO1]
 gi|116052809|ref|YP_793126.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296391485|ref|ZP_06880960.1| putative methyl transferase [Pseudomonas aeruginosa PAb1]
 gi|9950919|gb|AAG08051.1|AE004880_7 probable methyl transferase [Pseudomonas aeruginosa PAO1]
 gi|115588030|gb|ABJ14045.1| putative methyl transferase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 276

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV+     +       D   +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I     RHL  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPRHLLDEGWLLLEHGYDQGAAVRELLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V+  +D GGN+R+ L  
Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273


>gi|298485682|ref|ZP_07003761.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298159708|gb|EFI00750.1| modification methylase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 277

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAHVLNSHWFSALEGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|330988604|gb|EGH86707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 277

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|229522129|ref|ZP_04411546.1| methylase of polypeptide chain release factors [Vibrio cholerae TM
           11079-80]
 gi|229341054|gb|EEO06059.1| methylase of polypeptide chain release factors [Vibrio cholerae TM
           11079-80]
          Length = 286

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LSLKVSPSTLIPRPDTERLVELALDKA-----ALIDGELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|221233855|ref|YP_002516291.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter
           crescentus NA1000]
 gi|220963027|gb|ACL94383.1| peptide release factor-glutamine N5-methyltransferase [Caulobacter
           crescentus NA1000]
          Length = 289

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   D+   L    G++  +++ DP   L   Q   L + + R  + E +  I+G + F+
Sbjct: 23  QPSIDARLMLEVAAGVTRTEIVTDPYRELSAEQIATLNDYLERRARREPVSHIIGRKGFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ +   PRPETE++VD  L        +     +LDLG G+G + LA+L E P 
Sbjct: 83  KILLQVNKNVLTPRPETEVIVDEVLK----AFPEHMAFSMLDLGVGSGTILLAVLAERPA 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            KG+G+D S +AL +A+ NA    ++ R   L  DW + +    FD++VSNPPYI + ++
Sbjct: 139 AKGLGIDASSEALAVARENAANLDLNTRAALLHGDWTTGLGSDSFDLVVSNPPYIPTEVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR  +PR++LDGG DGL+ YR +A  + R L   GL +VEIGY+Q   V  +F 
Sbjct: 199 DTLEPEVRIHEPRLALDGGPDGLAAYRELAPEILRVLKPGGLFAVEIGYDQSQAVEALFR 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V   KD   +DRV+L  +
Sbjct: 259 AAGATEVRTVKDLSTHDRVVLGVK 282


>gi|254293183|ref|YP_003059206.1| modification methylase, HemK family [Hirschia baltica ATCC 49814]
 gi|254041714|gb|ACT58509.1| modification methylase, HemK family [Hirschia baltica ATCC 49814]
          Length = 288

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 96/260 (36%), Positives = 146/260 (56%), Gaps = 7/260 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            LRD+   +    G+S+  +I + ++ +  +     +  I R L+ E I RI G R+F+ 
Sbjct: 27  PLRDARRLMELAAGMSTTDLIAEENTQIPLQISAKFSAFIQRRLEGEPISRIAGRREFWG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++SD  +PRP+TE LV+  L+       K D   +LDLGTG+G + L++L E    
Sbjct: 87  LEFVITSDVLDPRPDTETLVELVLSEW-----KSDYKNVLDLGTGSGCILLSILSEKLSA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +G+G+D S KAL +A  NA    + +R     S+WF ++  E  FDVIVSNPPYI S  +
Sbjct: 142 QGLGLDQSEKALGVATKNAEKLELKQRARFQNSNWFDALTPEQKFDVIVSNPPYIPSADI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L ++V+ +DP  +LDGG DG   YR I      HLNK+GL + E+G+NQ   V  + E
Sbjct: 202 EVLDIDVKKYDPLSALDGGEDGYDDYRHIISKAKVHLNKNGLIAFEVGFNQAEKVCELLE 261

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           + K   +N  KD  G  R +
Sbjct: 262 NEKFIHINVRKDLSGVKRCV 281


>gi|229513824|ref|ZP_04403286.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA
           21]
 gi|229349005|gb|EEO13962.1| methylase of polypeptide chain release factors [Vibrio cholerae TMA
           21]
          Length = 286

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|193064883|ref|ZP_03045960.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E22]
 gi|194425825|ref|ZP_03058381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B171]
 gi|260843504|ref|YP_003221282.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|192927568|gb|EDV82185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E22]
 gi|194415880|gb|EDX32146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B171]
 gi|257758651|dbj|BAI30148.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|323162263|gb|EFZ48121.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E128010]
          Length = 277

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETHLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|289627917|ref|ZP_06460871.1| hemK protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|320325691|gb|EFW81752.1| hemK protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327390|gb|EFW83404.1| hemK protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330868899|gb|EGH03608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 277

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|32033820|ref|ZP_00134105.1| COG2890: Methylase of polypeptide chain release factors
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126209496|ref|YP_001054721.1| HemK-like protein [Actinobacillus pleuropneumoniae L20]
 gi|303251819|ref|ZP_07337990.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|307244798|ref|ZP_07526897.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307249119|ref|ZP_07531126.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307249195|ref|ZP_07531192.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253752|ref|ZP_07535606.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258209|ref|ZP_07539952.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260447|ref|ZP_07542142.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|126098288|gb|ABN75116.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|302649249|gb|EFL79434.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|306854243|gb|EFM86449.1| hypothetical protein appser1_120 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854407|gb|EFM86603.1| hypothetical protein appser2_20810 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306858719|gb|EFM90778.1| hypothetical protein appser4_120 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306863236|gb|EFM95176.1| hypothetical protein appser9_120 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867669|gb|EFM99514.1| hypothetical protein appser11_120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869850|gb|EFN01632.1| hypothetical protein appser12_230 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 290

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 93/266 (34%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F
Sbjct: 24  LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +I
Sbjct: 203 DKNLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 262 FKQYQWDEIESFQDYGGNDRLTKAVR 287


>gi|330873306|gb|EGH07455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 277

 Score =  280 bits (718), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++S T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +
Sbjct: 79  LDLEVASHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HLN DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPAHLNADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|193069963|ref|ZP_03050911.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E110019]
 gi|192956716|gb|EDV87171.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli E110019]
          Length = 277

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+  A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSQAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|218893761|ref|YP_002442630.1| putative methyl transferase [Pseudomonas aeruginosa LESB58]
 gi|254238596|ref|ZP_04931919.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719]
 gi|126170527|gb|EAZ56038.1| hypothetical protein PACG_04751 [Pseudomonas aeruginosa C3719]
 gi|218773989|emb|CAW29804.1| probable methyl transferase [Pseudomonas aeruginosa LESB58]
          Length = 276

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV+     +       D   +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I     +HL  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V+  +D GGN+R+ L  
Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273


>gi|316983955|gb|EFV62934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis H44/76]
          Length = 410

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 150 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 209

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 210 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 263

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 264 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 321

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 322 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 380

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 381 AENGFSGVETLPDLAGLDRVTLG 403


>gi|251792739|ref|YP_003007465.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534132|gb|ACS97378.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aggregatibacter aphrophilus NJ8700]
          Length = 299

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 94/270 (34%), Positives = 143/270 (52%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   T  S   ++   ++VL+ +    LT  + R LK E I  +LG ++F+++ L
Sbjct: 26  DALVLLQSATQKSRAFILAFGETVLEKKTLEKLTALLSRRLKGEPIAYLLGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESPF 121
            +S  T  PRP+TE+LV+ A+  ++ +++K        RILDLGTGTGA+ LAL  E  F
Sbjct: 86  AVSEKTLIPRPDTEVLVEKAVEIAIEKLQKCDQHSPSFRILDLGTGTGAIALALASELKF 145

Query: 122 F--------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                      +GVD   + +E+A++NA  N +      LQS WF +V G FDVIVSNPP
Sbjct: 146 VAQKQQIQLDIIGVDFLPEIVELARTNAKKNQL--NVHFLQSHWFDNVRGQFDVIVSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L     G +  R I +   ++L ++G   +E G+ Q  
Sbjct: 204 YIDNNDEHLNQGDVR-FEPLSALVAEEGGYTDLRHIIEHAPQYLTENGYLLLEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      V   +DYG N+RV L  
Sbjct: 263 KVRSIFQMNLWQDVETCRDYGNNERVTLGR 292


>gi|304388692|ref|ZP_07370752.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|254672055|emb|CBA04658.1| heme biosynthesis protein [Neisseria meningitidis alpha275]
 gi|304337359|gb|EFM03533.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
          Length = 423

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416


>gi|153801641|ref|ZP_01956227.1| hemK protein [Vibrio cholerae MZO-3]
 gi|124122818|gb|EAY41561.1| hemK protein [Vibrio cholerae MZO-3]
          Length = 286

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L  DG    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLFEHGYDQGVAVRTIMR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|209918453|ref|YP_002292537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SE11]
 gi|209911712|dbj|BAG76786.1| putative methyltransferase [Escherichia coli SE11]
 gi|324017538|gb|EGB86757.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           117-3]
          Length = 277

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ + + NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLTQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|297582071|ref|ZP_06943990.1| hemK protein [Vibrio cholerae RC385]
 gi|297533766|gb|EFH72608.1| hemK protein [Vibrio cholerae RC385]
          Length = 286

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAIHNAL-FLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAEENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|297618445|ref|YP_003703604.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297146282|gb|ADI03039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 296

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 137/266 (51%), Gaps = 7/266 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  V G+    + V+    ++  +R      I R ++ E +  + G ++F+
Sbjct: 25  EPRLEAELLLAYVLGIDRVGLYVNYYQPVNQDERSCYREIIKRRVQGEPVAYLTGKKEFF 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   +S +   PR ETE++V+ A+A           + + D+GTG GA+ +AL    P 
Sbjct: 85  SLEFDVSPEVLIPRAETEVMVEKAIAIGRGM---GGSLWVADVGTGCGAIAIALAVYLPN 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
            + V +DIS  A+E+A+ NA    V +R D +  D  + +       D++V+N PY+ + 
Sbjct: 142 ARIVAIDISSAAVELARKNARRYQVHDRIDFMVGDLLTPLGQDNAGLDIVVANLPYVPTN 201

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             + L LEV++F+PRI+LDGG DGL++YR +     + L + G   VEI +NQ   ++ +
Sbjct: 202 EWENLALEVKEFEPRIALDGGADGLAYYRRLMPQARQCLREGGYILVEIAWNQGPAMLSL 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   V   +D  G DRV++  +
Sbjct: 262 M-QHFFDEVEVGQDLAGRDRVVVGRK 286


>gi|152980147|ref|YP_001351901.1| methylase of polypeptide chain release factors [Janthinobacterium
           sp. Marseille]
 gi|151280224|gb|ABR88634.1| methylase of polypeptide chain release factors [Janthinobacterium
           sp. Marseille]
          Length = 280

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 10/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  VT LS  Q+I   +  L   +   L+    R L  E I  + G R+F+ 
Sbjct: 24  AQLEARILLGYVTRLSRVQLITQAERALTAEEAQQLSQLFARRLAGEPIAYLTGEREFFG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S     PRP+TELLV+ AL +  P+       R+LD+GTG+GA+ +A+    P  
Sbjct: 84  LSFDVSPAVLIPRPDTELLVELALHYLPPQ------GRVLDMGTGSGAIAVAIAHARPDA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               +D+S +AL IA+ NA  N    + + L+SDWFS+V E  FD+IVSNPPYI +    
Sbjct: 138 FVTALDVSAEALAIAEGNARKN--QVQVNFLRSDWFSAVKEQRFDLIVSNPPYIVAGDPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L    +GLS  +TI    +R+L       +E GY+Q   V  +  +
Sbjct: 196 LSEGDLR-FEPVDALTDHANGLSDLQTITRDAARYLAPAAWLLMEHGYDQAAAVRDVLAT 254

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V +++D  G +RV
Sbjct: 255 HGFTEVQSWRDLAGIERV 272


>gi|107099669|ref|ZP_01363587.1| hypothetical protein PaerPA_01000687 [Pseudomonas aeruginosa PACS2]
          Length = 276

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +   P+ ++         + I R    E +  ILG + F++
Sbjct: 19  ARLDTELLLAAAMGKPRSFLRTWPERIVPREANERFDDWIARRRNGEPVAYILGHQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV+     +       D   +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLEVAPHTLIPRPDTELLVE-----TALATLAADTATVLDLGTGTGAIALALASERPLW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD   +A+ +A+ N     + E  +  +S WFS+++G  F +IV NPPYI +    
Sbjct: 134 TVTAVDRVEEAVALAERNRQRL-LLENVEVRRSHWFSALDGRRFRMIVGNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G DGL   R I     +HL  +G   +E GY+Q   V  +  +
Sbjct: 193 LSEGDVR-FEPKSALVAGSDGLDDIRQIVAQAPQHLLDEGWLLLEHGYDQGAAVRELLGA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V+  +D GGN+R+ L  
Sbjct: 252 RGFAGVHTLRDLGGNERITLGQ 273


>gi|150397699|ref|YP_001328166.1| HemK family modification methylase [Sinorhizobium medicae WSM419]
 gi|150029214|gb|ABR61331.1| modification methylase, HemK family [Sinorhizobium medicae WSM419]
          Length = 292

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 112/260 (43%), Positives = 158/260 (60%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  +  L+   ++      + D     +  A+ R   HE ++RILG R+F  
Sbjct: 24  AALDARHLVSGLLELALAALVTRGREPVSDEDAARIRAAVERRAAHEPVYRILGEREFSG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L LS +T EPRP+TE +V+  +  +     K+   RI+DLGTGTGA+CLALL      
Sbjct: 84  LKLKLSKETLEPRPDTETMVECLIPHARRIALKKGSCRIVDLGTGTGAICLALLDAVLDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G DIS  AL  A  NA  NG++ RF+TL+S+W  +V G FD+IVSNPPYI S ++  
Sbjct: 144 RGLGTDISEDALATACENARRNGLAGRFETLRSNWLEAVNGRFDIIVSNPPYIRSNVIPD 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV+  DP  +LDGG DGL+ YR IA    RHL  DG+  +EIG++QK  V  +FE+ 
Sbjct: 204 LEPEVKFHDPAAALDGGEDGLNAYRAIASDAGRHLEPDGVIGLEIGFDQKQAVTALFEAH 263

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
              ++ A KD GGNDRVL+F
Sbjct: 264 GFHMLYAAKDLGGNDRVLVF 283


>gi|240950072|ref|ZP_04754374.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor NM305]
 gi|240295447|gb|EER46202.1| HemK-like protein/protein-glutamine N-methyl transferase
           [Actinobacillus minor NM305]
          Length = 289

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  S   +    ++VL + +   L   + R  K E I  ILG ++F
Sbjct: 24  LNVKVDANILLQAVTKRSKSAIFAFSETVLSEAELIELNALLARRAKGEPIAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S+ T  PRP+TE LV+ AL ++  R+  ++ ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLAVSTATLIPRPDTECLVEVALEWAYKRLNSQETLQILDLGTGTGAIALALASELG 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
                +G+D   +A+E+A+ N    G       LQSDWFS +E   FD+IVSNPPYI+  
Sbjct: 144 KKADIIGLDKQSEAVELAEKNRQKLGFK-NVRFLQSDWFSVLENHCFDLIVSNPPYIDKD 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I +    +L K G   +E G+ Q  +V +I
Sbjct: 203 DENLTKGDVR-FEPLTALVAEQHGLSDLQKIIENAPLYLAKQGALMLEHGWQQAAEVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F   +   +  FKDYG  DR+    R
Sbjct: 262 FRQNQWDKIETFKDYGNQDRITKAER 287


>gi|213967223|ref|ZP_03395372.1| hemK protein [Pseudomonas syringae pv. tomato T1]
 gi|301381041|ref|ZP_07229459.1| hemK protein [Pseudomonas syringae pv. tomato Max13]
 gi|302060377|ref|ZP_07251918.1| hemK protein [Pseudomonas syringae pv. tomato K40]
 gi|302134867|ref|ZP_07260857.1| hemK protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928065|gb|EEB61611.1| hemK protein [Pseudomonas syringae pv. tomato T1]
 gi|331018121|gb|EGH98177.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 277

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HLN DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGADGLDDLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|254291409|ref|ZP_04962202.1| hemK protein [Vibrio cholerae AM-19226]
 gi|150422739|gb|EDN14693.1| hemK protein [Vibrio cholerae AM-19226]
          Length = 286

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAALLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LSLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|254362306|ref|ZP_04978418.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           PHL213]
 gi|153093886|gb|EDN74814.1| protein-glutamine N-methyltransferase [Mannheimia haemolytica
           PHL213]
          Length = 288

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 143/262 (54%), Gaps = 4/262 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   +    +++L + +   L   + R  K E +  ILG+R+F
Sbjct: 24  LNAKFDANLLLQAVTKRSKSAIFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +++ L +S  T  PRP+TE LV+ AL ++  R+  + +++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPATLIPRPDTERLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELG 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
              + +GVD   +A+++A+ N    G+  +   LQSDWFSS+    FD+IVSNPPYI+  
Sbjct: 144 EKAQIIGVDFQNEAVQLAEENRRNLGL-NQVTFLQSDWFSSLANQQFDLIVSNPPYIDES 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS  + I +    HL   G   +E G+ Q   V  +
Sbjct: 203 DENLTVGDVR-FEPLTALVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDL 261

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F+      V   +DY GNDRV 
Sbjct: 262 FDLHLWEQVETAQDYAGNDRVT 283


>gi|152970780|ref|YP_001335889.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|150955629|gb|ABR77659.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 283

 Score =  280 bits (717), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   +VR  + E I  ++G R+F++
Sbjct: 21  PRRDAEILLGYVTGRARTWILAFGETTLSADEAAKLEALLVRRQRGEPIAHLVGQREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 81  LPLFVSPATLIPRPDTECLVEQALARL-----PTAPCRILDLGTGTGAIALALASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA    ++      QSDWFS++ G  F  IVSNPPYI++    
Sbjct: 136 EVTAVDVMPDAVALALRNAEHLSIA-NVTISQSDWFSALAGQRFATIVSNPPYIDAADPH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 195 LAEGDVR-FEPLTALVAGDQGLADLAHIIREGRQYLQPGGWMLLEHGWTQGEAVRALFRE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 254 AGYLDVATCRDYGDNERLTLGR 275


>gi|325133243|gb|EGC55909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M13399]
 gi|325139388|gb|EGC61928.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis CU385]
 gi|325201113|gb|ADY96568.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis H44/76]
          Length = 273

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|110803251|ref|YP_699477.1| HemK family modification methylase [Clostridium perfringens SM101]
 gi|110683752|gb|ABG87122.1| modification methylase, HemK family [Clostridium perfringens SM101]
          Length = 587

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L ++       +I + +  +         N + +      +  ILG  +F  +
Sbjct: 324 ILDTQLLLGKILEKDKIWLITNKNEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 500 NTLMKDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582


>gi|254671226|emb|CBA08440.1| heme biosynthesis protein [Neisseria meningitidis alpha153]
          Length = 423

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 277 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416


>gi|90412791|ref|ZP_01220791.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum 3TCK]
 gi|90326150|gb|EAS42577.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Photobacterium profundum 3TCK]
          Length = 282

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  P+    D Q       + R +  E +  ILG R+F++
Sbjct: 24  PQLDAAVLLCHVLDKPRSYLLTWPEKEPSDEQFTLFEALLARRITGEPVAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL              +LDLGTGTGA+ LA+  E    
Sbjct: 84  LPLKVSPFTLIPRPDTERLVEVALEKI-----PTQACTVLDLGTGTGAIALAIASERNDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A  N     +      L   W++ +  + LF VIVSNPPYI++   
Sbjct: 139 QVTGIDLRPEAAELAAENGQRLNIQ-NARFLAGSWYTPLASDELFAVIVSNPPYIDAADP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +VR F+P+ +L    +GL+  + I++   +HL   G   +E G+ Q   V  I +
Sbjct: 198 HLVLGDVR-FEPKTALIADDNGLADIQIISEQGRQHLQTGGWLLMEHGFEQGEAVRHILQ 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                LV+  +DY G DRV L C
Sbjct: 257 ELGYHLVSTAQDYAGLDRVTLGC 279


>gi|71735390|ref|YP_273269.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71555943|gb|AAZ35154.1| hemK protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 277

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WF+++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFNALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|168213693|ref|ZP_02639318.1| protein- methyltransferase, release factor-specific [Clostridium
           perfringens CPE str. F4969]
 gi|170714843|gb|EDT27025.1| protein- methyltransferase, release factor-specific [Clostridium
           perfringens CPE str. F4969]
          Length = 587

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I +    +         N + +      +  ILG  +F  +
Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582


>gi|269798158|ref|YP_003312058.1| modification methylase, HemK family [Veillonella parvula DSM 2008]
 gi|269094787|gb|ACZ24778.1| modification methylase, HemK family [Veillonella parvula DSM 2008]
          Length = 289

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       + +  K   +  I+G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        K   +RILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNLRILDVCTGPGTILLSLLHYLPNS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG+DIS  AL +A+ N  +  +S+R   ++SD F ++ G    FD+IVSNPPYI +  
Sbjct: 143 SGVGLDISTDALPVARENGESFNLSDRVQFMESDMFHTLYGKKEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +V + +P I+L GG DGL  YR +A     +LN +G  + E+G++Q  +V  + 
Sbjct: 203 LKMLSPDVLN-EPHIALFGGEDGLQFYRILAKECRNYLNANGRVAFEVGFDQAEEVGALL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           +       ++   D GG +RV+  
Sbjct: 262 QETGQYSNIHFIADLGGYNRVVTA 285


>gi|15642177|ref|NP_231809.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121586800|ref|ZP_01676582.1| hemK protein [Vibrio cholerae 2740-80]
 gi|153818816|ref|ZP_01971483.1| hemK protein [Vibrio cholerae NCTC 8457]
 gi|153823574|ref|ZP_01976241.1| hemK protein [Vibrio cholerae B33]
 gi|227082303|ref|YP_002810854.1| hemK protein [Vibrio cholerae M66-2]
 gi|229507744|ref|ZP_04397249.1| methylase of polypeptide chain release factors [Vibrio cholerae BX
           330286]
 gi|229512020|ref|ZP_04401499.1| methylase of polypeptide chain release factors [Vibrio cholerae
           B33]
 gi|229607289|ref|YP_002877937.1| methylase of polypeptide chain release factor [Vibrio cholerae
           MJ-1236]
 gi|254849257|ref|ZP_05238607.1| hemK protein [Vibrio cholerae MO10]
 gi|255745093|ref|ZP_05419042.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS
           101]
 gi|298497807|ref|ZP_07007614.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio cholerae MAK 757]
 gi|18203196|sp|Q9KQ26|HEMK_VIBCH RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.VchAHemK2P
 gi|9656732|gb|AAF95323.1| hemK protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548967|gb|EAX59006.1| hemK protein [Vibrio cholerae 2740-80]
 gi|126510659|gb|EAZ73253.1| hemK protein [Vibrio cholerae NCTC 8457]
 gi|126518909|gb|EAZ76132.1| hemK protein [Vibrio cholerae B33]
 gi|227010191|gb|ACP06403.1| hemK protein [Vibrio cholerae M66-2]
 gi|229351985|gb|EEO16926.1| methylase of polypeptide chain release factors [Vibrio cholerae
           B33]
 gi|229355249|gb|EEO20170.1| methylase of polypeptide chain release factors [Vibrio cholerae BX
           330286]
 gi|229369944|gb|ACQ60367.1| methylase of polypeptide chain release factor [Vibrio cholerae
           MJ-1236]
 gi|254844962|gb|EET23376.1| hemK protein [Vibrio cholerae MO10]
 gi|255736923|gb|EET92319.1| methylase of polypeptide chain release factors [Vibrio cholera CIRS
           101]
 gi|297542140|gb|EFH78190.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Vibrio cholerae MAK 757]
          Length = 286

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|221135299|ref|ZP_03561602.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Glaciecola sp. HTCC2999]
          Length = 286

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 8/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   LC V   +   +   PD VL   Q+    + I +    + I  ILG+++FY
Sbjct: 25  DAKIDAQCLLCAVLDCNRAYLHTWPDKVLSSTQQTEFLHFIEQRQTGKPIAYILGYQNFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S  T  PRPETE  VD  +A       K  + R+LDLGTGTGA+ L+++ + P 
Sbjct: 85  GYDFAVSPVTLIPRPETEQCVDLVIA-------KPYIKRVLDLGTGTGAIALSIILQRPE 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + +GVD   +A+ +A+ NA            QSDWFS V+G FDVIVSNPPY+E     
Sbjct: 138 LEVLGVDFVPEAVMLAQQNAQNLAPKSNISFKQSDWFSHVDGRFDVIVSNPPYVEPDSPY 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L    +GL+    I      +LN++GL  +E G+ Q  ++ ++   
Sbjct: 198 LAKGDIR-FEPNSALTAAENGLADIIRIVSEAKHYLNENGLVILEHGHTQGTEIRQLMTQ 256

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V    DY G  R+ L 
Sbjct: 257 NGFTNVTTLCDYAGQHRITLG 277


>gi|330881881|gb|EGH16030.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 277

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|225568387|ref|ZP_03777412.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM
           15053]
 gi|225162615|gb|EEG75234.1| hypothetical protein CLOHYLEM_04464 [Clostridium hylemonae DSM
           15053]
          Length = 303

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 90/275 (32%), Positives = 129/275 (46%), Gaps = 25/275 (9%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  VTG++       P++ LD  +       I R  + E +  I G ++F 
Sbjct: 26  EAGIDAWYLLEYVTGITRAAYYAHPETELDADKEDAYFAHIGRRARREPLQHITGEQEFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S     PR +TE+LV+ AL    P       +RILD+ TG+G V +++LK    
Sbjct: 86  GYSFRVSGHVLIPRQDTEILVEEALKVLAP------GMRILDMCTGSGCVLISILKAGRE 139

Query: 122 ------FKGVGVDISCKALEIAKSNAVT-----------NGVSERFDTLQSDWFSSVEGL 164
                  +G G DIS +A+ +A+ NA             NG   RF     D F   E  
Sbjct: 140 RLRMERLEGTGSDISPEAVAVAEYNAARLLGRTETGRGNNGCCARF--CTGDLFEKAEER 197

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+IVSNPPYI +  +  L  EVR  DP I+LDG  DGL  YR I    + ++ + G   
Sbjct: 198 YDLIVSNPPYIRTEEIRKLQREVRLHDPYIALDGKKDGLYFYRRITAESAAYIAEGGYLM 257

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            EIG++Q  DV  + E      V   KD  G DR+
Sbjct: 258 FEIGHDQAEDVCALLEQSGYADVFVKKDLAGLDRI 292


>gi|187932826|ref|YP_001884695.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B str. Eklund 17B]
 gi|187720979|gb|ACD22200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B str. Eklund 17B]
          Length = 287

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L +V       +I   +  +D          I +  +   +  IL   +F N
Sbjct: 25  SRLDAELLLGKVLNKEKIYLITHREEKIDKTNEEKYMELINKRKEKMPVKYILNECEFMN 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LV+  L      I++ D  +I DL  G+GA+ +AL       
Sbjct: 85  INFYVEPGVLIPRADTEILVEEVLK----HIDENDSKKICDLCCGSGAIGIALANLRKNI 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               +D      ++   N   + + +R   ++SD  +   +    +D+IVSNPPYIE   
Sbjct: 141 NVDLIDYYETPEKVTLINIEKSNILDRASFMKSDLLNKSINDAKRYDIIVSNPPYIEECE 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V++++P  +L GG DGL  Y+ I +     LNK+G+ + EIGYNQ  DV  + 
Sbjct: 201 INDLMEDVKNYEPHTALSGGKDGLDFYKRIINESINVLNKNGILAFEIGYNQGTDVKELM 260

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E +    V   KD  G DRV++ 
Sbjct: 261 EEKNFIEVKIVKDLAGLDRVVIG 283


>gi|190151398|ref|YP_001969923.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|189916529|gb|ACE62781.1| HemK-like protein [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
          Length = 314

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG +DF
Sbjct: 48  LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDF 107

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 108 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 167

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 168 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 226

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +I
Sbjct: 227 DENLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 285

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 286 FQQYQWDEIESFQDYGGNDRLTKAVR 311


>gi|331008867|gb|EGH88923.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 277

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLQRRCTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL  +          ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALELA----PAFAPAKVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L   WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNRHWFSALEGQQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HL+ DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADAPVHLSADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|170717667|ref|YP_001784743.1| HemK family modification methylase [Haemophilus somnus 2336]
 gi|168825796|gb|ACA31167.1| modification methylase, HemK family [Haemophilus somnus 2336]
          Length = 301

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   ++   +++L + +   LT  +VR  K E +  +LG  +F
Sbjct: 24  LDAKVDANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALL 116
           + + L ++  T  PRP+TE+LV+ AL       + +D     +RILDLGTGTGA+ LAL 
Sbjct: 84  WTLNLQVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSPIRILDLGTGTGAIALALA 143

Query: 117 KESP----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            E       F+  G+D+   A+++AK+NAV N ++E    LQS+WF  V G FD+IVSNP
Sbjct: 144 DELKKSGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNP 202

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L     G +  + I +    +L K G   VE G+ Q 
Sbjct: 203 PYIDAEDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQG 261

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             V   F  +    V    DYGGN+R+ L  
Sbjct: 262 QKVRSFFAEKLWKQVETINDYGGNERITLAQ 292


>gi|152997600|ref|YP_001342435.1| HemK family modification methylase [Marinomonas sp. MWYL1]
 gi|150838524|gb|ABR72500.1| modification methylase, HemK family [Marinomonas sp. MWYL1]
          Length = 282

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 136/263 (51%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V  +S+      P+ ++           + R    E +  +LG + F+N
Sbjct: 21  AQLDAQLLLAHVLAVSTSYFYTWPEKLVSTSDVERFNGLLARRELGEPVAYLLGQQAFWN 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PR +TE LV+ AL+     ++   V RILDLGTGTGA+ L+L  E P  
Sbjct: 81  LDLEVAPCTLIPRADTERLVEVALSV----LDISKVNRILDLGTGTGAIALSLASEQPKS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
             +GVD+   A+ +AK NA+ N +S   D LQS WF ++EG   FD+IVSNPPYI+    
Sbjct: 137 TVMGVDLVEDAVALAKRNALRNKLS-NVDFLQSSWFDALEGCEPFDLIVSNPPYIDPDDE 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L     G++    I +   + + ++     E GY+Q   V + F 
Sbjct: 196 HLSQGDVR-FEPKSALVADNHGMADIEHIIEVAPKFMQQNAYLMFEHGYDQAASVRKCFI 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V +F+D+GGNDRV +  
Sbjct: 255 EAGFAAVESFQDFGGNDRVTIGQ 277


>gi|330967415|gb|EGH67675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 277

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DNAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI    S HLN DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGSDGLDDLRTIIADASAHLNADGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|74312448|ref|YP_310867.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sonnei Ss046]
 gi|191166624|ref|ZP_03028452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B7A]
 gi|218694726|ref|YP_002402393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|300821018|ref|ZP_07101167.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           119-7]
 gi|307310033|ref|ZP_07589683.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli W]
 gi|309794303|ref|ZP_07688727.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           145-7]
 gi|331676992|ref|ZP_08377688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H591]
 gi|73855925|gb|AAZ88632.1| possible protoporphyrinogen oxidase [Shigella sonnei Ss046]
 gi|190903273|gb|EDV62994.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli B7A]
 gi|218351458|emb|CAU97166.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli 55989]
 gi|300526317|gb|EFK47386.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           119-7]
 gi|306909751|gb|EFN40245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli W]
 gi|308122208|gb|EFO59470.1| protein-(glutamine-N5) methyltransferase [Escherichia coli MS
           145-7]
 gi|315060463|gb|ADT74790.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Escherichia coli W]
 gi|320199251|gb|EFW73842.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli EC4100B]
 gi|323168382|gb|EFZ54063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shigella sonnei 53G]
 gi|323172434|gb|EFZ58071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli LT-68]
 gi|323185626|gb|EFZ70987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli 1357]
 gi|323378973|gb|ADX51241.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli KO11]
 gi|331075681|gb|EGI46979.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Escherichia coli H591]
          Length = 277

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|307262577|ref|ZP_07544208.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306872075|gb|EFN03788.1| hypothetical protein appser13_70 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 290

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG +DF
Sbjct: 24  LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKDF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 143

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 144 DKAQIIGVDFKPEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDKQ 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    +GLS  + I +    +L  +G   +E G+ Q   V +I
Sbjct: 203 DENLQYGDVR-FEPLSALVAEQNGLSDLQKIIENAPLYLLDNGALMLEHGWQQAQAVQQI 261

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 262 FQQYQWDEIESFQDYGGNDRLTKAVR 287


>gi|165977489|ref|YP_001653082.1| protein-glutamine N-methyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165877590|gb|ABY70638.1| protein-glutamine N-methyl transferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 320

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  +   +    ++ L   +   L   + R L+ E +  ILG ++F
Sbjct: 48  LNPKTDANLLLQAVTKRTKSAIFAFGETALHQTELAELAQLLARRLQGEPMAYILGEKEF 107

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE LV+ AL +   R+E +  ++ILDLGTGTGA+ LAL  E  
Sbjct: 108 WSLPLKVSPHTLIPRPDTERLVEVALDWVYKRLESQQTLQILDLGTGTGAIALALASELG 167

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +GVD   +A+ +A++N    G  E    LQSDWFS++E   FD+IVSNPPYI+  
Sbjct: 168 DKAQIIGVDFKLEAVTLAETNRQNLGF-ENVRFLQSDWFSALENRQFDLIVSNPPYIDQQ 226

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L    DGLS  + I      HLN +G   +E G+ Q   V +I
Sbjct: 227 DENLQYGDVR-FEPLSALVAEQDGLSDLQKIIQNAPLHLNDNGALILEHGWQQAQAVQQI 285

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F+  +   + +F+DYGGNDR+    R
Sbjct: 286 FQQYQWDEIASFQDYGGNDRLTKAIR 311


>gi|260772291|ref|ZP_05881207.1| Polypeptide chain release factor methylase [Vibrio metschnikovii
           CIP 69.14]
 gi|260611430|gb|EEX36633.1| Polypeptide chain release factor methylase [Vibrio metschnikovii
           CIP 69.14]
          Length = 280

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 91/263 (34%), Positives = 127/263 (48%), Gaps = 10/263 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V       ++  PD  LD          + R +  E I  I+G R+F+++ 
Sbjct: 24  LDAALLLCHVLQKPRSYLLTWPDKRLDADAISAFEVLLARRIAGEPIAYIIGEREFWSLP 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++  T  PRP+TE LV+ AL  ++          ILDLGTGTGA+ LAL  E P    
Sbjct: 84  LKVAPSTLIPRPDTERLVELALDKAVLIDGD-----ILDLGTGTGAIALALASELPQRHV 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           +G+D+  +A+E+A+ N     +S     LQ  WF+ +     F +I SNPPYIE      
Sbjct: 139 LGIDLRSEAVELAEDNRKRLQLS-NVTFLQGSWFTPLANGIKFALIASNPPYIEEHDPHL 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L  G +GL+  + IA     +L   G    E GY Q   V  I    
Sbjct: 198 QQGDVR-FEPRSALVAGDNGLADIKHIATSAREYLLDRGWLLFEHGYQQGKAVRAILSEL 256

Query: 243 KLFLVNAFKDYGGNDRVLLF-CR 264
               V   +DY GNDRV L  CR
Sbjct: 257 GYQQVVTEQDYAGNDRVTLGQCR 279


>gi|219849414|ref|YP_002463847.1| modification methylase, HemK family [Chloroflexus aggregans DSM
           9485]
 gi|219543673|gb|ACL25411.1| modification methylase, HemK family [Chloroflexus aggregans DSM
           9485]
          Length = 293

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  + G S  +V+ + + VL   Q+      + R    E +  ++G   F+ 
Sbjct: 31  ARLDAELLLAHILGWSRARVVAEREVVLTPAQQEAFGALVERRAAREPVAYLIGHWPFFG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETELLV+ AL  +    + +  + I D+G G+GA+ +AL    P  
Sbjct: 91  LDLVVDRRVLIPRPETELLVELALTEARRYADTQ--ITIADIGVGSGAIAIALAIHVPHA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              GVD S  AL +A  N     +S+R   L+ D  + V G  D+IVSNPPY    I+  
Sbjct: 149 TVYGVDRSADALAVAARNVARYNLSDRVVLLEGDLLTPVPGPVDLIVSNPPY---TILAE 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +   V  ++P ++LDGG DGL  YR +      +L   G   +EIG  Q   V  +  ++
Sbjct: 206 VDESVYRYEPHLALDGGPDGLDCYRRLIAAAPAYLKPGGAILLEIGAWQAEAVAHLLNQA 265

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D  G DRV+   
Sbjct: 266 LPHAEVGVQRDLAGRDRVVWAR 287


>gi|261343908|ref|ZP_05971553.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii
           DSM 4541]
 gi|282568294|gb|EFB73829.1| protein-(glutamine-N5) methyltransferase [Providencia rustigianii
           DSM 4541]
          Length = 277

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L   TG S   ++   ++ L   +   L   + R    E I  I+G R+F++
Sbjct: 20  AKRDAQILLQHATGRSRTYILAFDETELSAHELQQLEELLQRREFGEPIAYIVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL             RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLYVSPATLIPRPDTECLVEQALIRL-----PSTDCRILDLGTGTGAIALALASERPNS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             +GVD + +A+ +A+ N     +       QSDWF+S+   LFD+IVSNPPYI+   + 
Sbjct: 135 TVIGVDFNPEAVVLAERNQQRLSIF-NVRFSQSDWFTSLSNELFDMIVSNPPYIDEGDIH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GLS    I     R+L + G   +E G+ Q + V  +F  
Sbjct: 194 LNQGDVR-FEPATALIAEEHGLSDLAHIIAESKRYLKQQGWLLLEHGWQQGLAVRELFSE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +    DYGG DRV L  
Sbjct: 253 NGYTNIETCLDYGGKDRVSLGQ 274


>gi|237737786|ref|ZP_04568267.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419666|gb|EEO34713.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 378

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60
            A  D+      +  +S   + ++ +  +++  +  +    + R  + + +  +LG  +F
Sbjct: 110 NARLDAEYIFAHILKVSRVTLTLNLNKKIEEEDKNRIREMLVARGKERKPLQYLLGEWEF 169

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +      PR +TE+LV+         + +    +I+D+GTG+GA+ ++L KE P
Sbjct: 170 YGYPFKVDERVLIPRADTEILVEQ----CKYLVNELPSPKIMDIGTGSGAIAISLAKELP 225

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPY 174
               +G+DIS  ALE+A  N   N  +     L+SD FS +         F++IVSNPPY
Sbjct: 226 NTHVLGLDISEGALEVATQNRDINEAT-NVKFLKSDVFSILRDEKYKNVKFNLIVSNPPY 284

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +     L  EV  ++P+ +L    DG   Y  I+      L KDG    E+GYNQ   
Sbjct: 285 IPTEEYVELMPEVLKYEPKNALTDNGDGYYFYEKISKEAKEFLTKDGYLVFEVGYNQAEK 344

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V          +++  KDYGG DRV++  R
Sbjct: 345 VADFMRENGFDVLSIVKDYGGIDRVVIGKR 374



 Score = 36.6 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 6/47 (12%), Positives = 13/47 (27%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49
             +S   +  V  L    +    D  L   Q+  +   +    +  
Sbjct: 22 PRLESEKLIAAVLKLDRITLYAYFDMELTTEQKDTIKKYLREMARGR 68


>gi|229524174|ref|ZP_04413579.1| methylase of polypeptide chain release factors [Vibrio cholerae bv.
           albensis VL426]
 gi|229337755|gb|EEO02772.1| methylase of polypeptide chain release factors [Vibrio cholerae bv.
           albensis VL426]
          Length = 286

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLVSLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILC 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|254804125|ref|YP_003082346.1| heme biosynthesis protein [Neisseria meningitidis alpha14]
 gi|254667667|emb|CBA03497.1| heme biosynthesis protein [Neisseria meningitidis alpha14]
          Length = 273

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|294792025|ref|ZP_06757173.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 6_1_27]
 gi|294457255|gb|EFG25617.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella sp. 6_1_27]
          Length = 289

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G     +    D  L   +       + +  K   +  I+G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKDRIYLYTHYDQPLIQDELDAFRPLVQQRAKGHCVAAIIGEKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE L++  L        K   VRILD+ TG G + L+LL   P  
Sbjct: 87  LTFKVNDKVLIPRPDTETLIEHVLG----TYPKDSNVRILDVCTGPGTILLSLLHYLPNA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            GVG++IS  AL +A+ N     +++R   L+SD FS++ G    FD+IVSNPPYI +  
Sbjct: 143 CGVGLEISIDALLVAEENGERFNLNDRVQFLESDMFSALAGNAEKFDLIVSNPPYIRTGD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  +V + +P I+L GG DGL  YR +A     +LN +G  + E+G++Q  +V  + 
Sbjct: 203 VKLLSQDVLN-EPHIALFGGEDGLEFYRILAKECRNYLNANGRVAFEVGFDQAKEVGALL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           +       +    D GG++RV+  
Sbjct: 262 QETGQYSNIQFIADLGGHNRVVTA 285


>gi|113461091|ref|YP_719159.1| peptide release factor glutamine N(5)-methylase [Haemophilus somnus
           129PT]
 gi|112823134|gb|ABI25223.1| [protein release factor]-glutamine N5-methyltransferase
           [Haemophilus somnus 129PT]
          Length = 301

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 10/271 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  D++  L  VT  S   ++   +++L + +   LT  +VR  K E +  +LG  +F
Sbjct: 24  LDAKVDANLLLQTVTKRSKSAILAFSETLLTEDELKQLTELLVRRAKGEPMAYVLGETEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALL 116
           + + L ++  T  PRP+TE+LV+ AL       + +D     +RILDLGTGTGA+ LAL 
Sbjct: 84  WTLNLQVAPYTLIPRPDTEILVEQALVCIQLLKKSKDFTQSSIRILDLGTGTGAIALALA 143

Query: 117 KESP----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            E       F+  G+D+   A+++AK+NAV N ++E    LQS+WF  V G FD+IVSNP
Sbjct: 144 DELKKSGQHFEIFGLDVIADAVKLAKTNAVRNHLTE-VQFLQSNWFEQVTGQFDLIVSNP 202

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI++        +VR F+P  +L     G +  + I +    +L K G   VE G+ Q 
Sbjct: 203 PYIDAEDQHLNQGDVR-FEPLTALVAEKKGYADLQYIIEQAPNYLKKQGFLLVEHGWQQG 261

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             V   F  +    V    DYGGN+R+ L  
Sbjct: 262 QKVRSFFAEKLWKQVETINDYGGNERITLAQ 292


>gi|153825564|ref|ZP_01978231.1| hemK protein [Vibrio cholerae MZO-2]
 gi|149740715|gb|EDM54814.1| hemK protein [Vibrio cholerae MZO-2]
          Length = 286

 Score =  279 bits (715), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKA-----ALIDGELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDLR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   +DY G+DRV L  
Sbjct: 257 DLGYQNIITEQDYAGHDRVTLGQ 279


>gi|312884084|ref|ZP_07743797.1| methylase of polypeptide chain release factor [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368254|gb|EFP95793.1| methylase of polypeptide chain release factor [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 286

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 122/263 (46%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V       ++  PD  ++          + R    E +  I+G R+F++
Sbjct: 26  ATLDASVLLCHVLDRPRSYLMTWPDRTVESEVVNKFNELVKRRESGEPVAYIVGEREFWS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +SS T  PRP+TE LV+ AL  S           ILDLGTGTGA+ LAL  E P  
Sbjct: 86  LNLKVSSSTLIPRPDTERLVELALEKSTLV-----KGDILDLGTGTGAIALALASELPDR 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
              GVD+  +A  IA+ NA    +      L   WF  ++    F +IVSNPPYIES   
Sbjct: 141 NVWGVDLKQEAQHIAQDNAERLSIK-NAQFLFGSWFEPLDHDAKFALIVSNPPYIESDDP 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L     GL+    IA     HL + G    E G +Q   V  + E
Sbjct: 200 HLSEGDVR-FEPLSALVSEKQGLADIEVIAKQAPEHLLEGGWLLFEHGLDQGEPVRTLLE 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +     V  F+DYG  DRV +  
Sbjct: 259 TLGYDQVETFQDYGHRDRVTVGR 281


>gi|225076162|ref|ZP_03719361.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens
           NRL30031/H210]
 gi|224952505|gb|EEG33714.1| hypothetical protein NEIFLAOT_01194 [Neisseria flavescens
           NRL30031/H210]
          Length = 270

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 119/264 (45%), Gaps = 12/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   +G +  Q++      + D  R  +     R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYASGYTRVQLLTRGGEEIPDEVRQRVDRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRPETE LV++ LA         +  R+ DLGTG+GA+ + +  E    
Sbjct: 73  RCFAVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAIAVTVALERVDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  AL+ A+ NA   G   + +  Q  WF      EG +DVIVSNPPYIE   
Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIEDGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I 
Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  V   +D  G DR+ L  
Sbjct: 244 LENGFAEVATEQDLAGLDRITLGR 267


>gi|182420442|ref|ZP_02641457.2| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens NCTC 8239]
 gi|182382208|gb|EDT79687.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens NCTC 8239]
          Length = 572

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I +    +         N + +      +  ILG  +F  +
Sbjct: 309 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 368

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 369 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 424

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 425 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 484

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 485 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 544

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 545 EKGYYDVKVIKDLAGLDRCVIGR 567


>gi|310659437|ref|YP_003937158.1| methyltransferase [Clostridium sticklandii DSM 519]
 gi|308826215|emb|CBH22253.1| Methyltransferase [Clostridium sticklandii]
          Length = 283

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +    + +V       ++++ +  +D+ +   +   I +      +  ILG R+F+ + 
Sbjct: 22  LEIQMMIAKVIEKDRLYIMLNLEEDIDESKVEIIKTMIEKRKNSYPLQYILGEREFWGMD 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S     PR +TE+L++  L        K + ++  ++G G+G + + LLKE      
Sbjct: 82  FNVSEGVLIPRQDTEILIEETLKKLKNHKHKSN-LKGFEIGVGSGIISITLLKEIETLIM 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           +GVDI+ KA+E+ K+NA  + VS+R   L S+ F  +  E  FD I+SNPPYIE+ ++D 
Sbjct: 141 IGVDINDKAIELTKANASKHQVSDRLCILNSNLFEKINKENQFDFIISNPPYIETKVIDS 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +++  +P+++LDGG DGL  YR I +    +++ +G  + EIGYNQ   V +IF   
Sbjct: 201 LQEDIKQHEPKLALDGGADGLDFYRDIIEQSKHYISPEGFIAFEIGYNQAEAVKKIFVEN 260

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KD  G DRV++ 
Sbjct: 261 GYQNVTIAKDLAGFDRVVIG 280


>gi|90416953|ref|ZP_01224882.1| hemK protein [marine gamma proteobacterium HTCC2207]
 gi|90331300|gb|EAS46544.1| hemK protein [marine gamma proteobacterium HTCC2207]
          Length = 277

 Score =  279 bits (715), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    LC V G++   +   P+  +           + R +  E +  ++G + F++
Sbjct: 20  PQLDCELLLCFVLGVAPSYLKTWPERQVSGDHWAQFDALLQRRIAGEPVAYLIGSQGFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRPETELLV+ AL  +LP     +   +LDLGTGTGA+ LAL  E   +
Sbjct: 80  LDLEVSPATLIPRPETELLVEVALDLALP-----EQAAVLDLGTGTGAIALALASERNGW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +   VD+   A+++A+ N     +        SDWF+++    FD+IVSNPPYIE+    
Sbjct: 135 QICAVDLQQSAVDLAERNRQRYQL-NNVRLFASDWFAAIPVQRFDLIVSNPPYIEANDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R +      +L   G   +E G++Q   V  + E 
Sbjct: 194 LTQGDVR-FEPASALVSGDDGLDDLRLVCSQSVDYLADGGWLLLEHGFDQGAAVRELLER 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
               LV    D  G +R+ L C
Sbjct: 253 AGFTLVETRSDLNGCERITLGC 274


>gi|330961729|gb|EGH61989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 277

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R  K E +  ILG + F+ 
Sbjct: 19  ARLDVELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLERRRKGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFASAQVLDLGTGTGAIGLALANERKQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     +    +  +S WFS ++G  FD+I+SNPPY+      
Sbjct: 135 KVTAVDRVAEAVALAERNRQRLHL-NNAEIFESHWFSGLQGRQFDLIISNPPYVPDDDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I +    HLN +G   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALIAGADGLDDLRAITEQAPAHLNAEGWLLLEHGYDQGAAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    +   +D G ++R+   C+
Sbjct: 253 QGFERIQTRRDLGEHERITFGCK 275


>gi|323698088|ref|ZP_08110000.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. ND132]
 gi|323458020|gb|EGB13885.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio desulfuricans ND132]
          Length = 283

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 128/261 (49%), Gaps = 7/261 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +        G S   + +D   VL D +   +   + R    E +  ILG R+FY +   
Sbjct: 26  AELLAAHALGCSRPALNLDRGRVLTDEELAAVETLVARREAGEPVAYILGNREFYGLDFA 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETE +V++       R  K    R  DLGTG+G + + +    P  +GV 
Sbjct: 86  VSPAVLIPRPETEHIVEAV----EERFSKDQPFRFADLGTGSGILAVTIAVLFPQARGVA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGL 185
           VDIS  AL++A++NA T+ V++R D LQ+D+ S   EG +D++VSNPPY+     +    
Sbjct: 142 VDISPDALDVARANARTHNVADRLDFLQADFTSQTPEGPYDLVVSNPPYVTEAEFEAASR 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR--K 243
           EV  F+P  +L  G DGL H R +   V+  L   G   +EIG+ Q   V+ I       
Sbjct: 202 EVTGFEPTGALVSGPDGLDHIRAMLPRVADMLRPGGWMFMEIGWEQGCAVMNILAGEYPS 261

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KD  G DRV+   R
Sbjct: 262 FEAVGVRKDLAGLDRVVCARR 282


>gi|146306095|ref|YP_001186560.1| HemK family modification methylase [Pseudomonas mendocina ymp]
 gi|145574296|gb|ABP83828.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudomonas mendocina ymp]
          Length = 294

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L    G     +   P+  LD++Q+      ++R  + E +  ILG + F++
Sbjct: 36  PRLDVELLLAAALGKPRSYLRTWPERELDEQQQALFQANLMRRRQGEPVAYILGHQGFWS 95

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV++AL      +     + +LDLGTGTGA+ LAL  E P +
Sbjct: 96  LELEVAPHTLIPRPDTELLVETALE-----LLPATPLTVLDLGTGTGAIALALASERPAW 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD    A+ +A+ N     + +    + S WFS++ G  + +I+SNPPYI +    
Sbjct: 151 RVTGVDRVEDAVALAERNRQRLQL-DNAAFVHSHWFSALSGQRYGLILSNPPYIRADDRH 209

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +
Sbjct: 210 LNEGDVR-FEPSSALVAGSDGLDDIRAIIQAAPAHLLAGGWLLLEHGFDQAEAVRGLLAA 268

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V++ +D GG++R+ L  
Sbjct: 269 AGFAEVHSRRDLGGHERISLGR 290


>gi|167629002|ref|YP_001679501.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1]
 gi|167591742|gb|ABZ83490.1| methyltransferase, putative [Heliobacterium modesticaldum Ice1]
          Length = 297

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 6/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G+S   ++      L D Q+  L   I R L    +  I G ++F+ 
Sbjct: 30  PRLEAEVLLAYGLGVSRAGLLAMLRDQLTDAQQARLGELIQRRLTGCPLQYITGRQEFWG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETELLV++ALA       +     I D+G G+GA+ +A+ +E P  
Sbjct: 90  LDFAVTPAVLIPRPETELLVETALALL---GRQDRTAWIADVGVGSGAIAVAMARERPRL 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
           + +  D+S  AL +A+ NA  +GV+ +    + D              ++SNPPYI S  
Sbjct: 147 QVLATDLSEAALAVARQNAKRHGVAGQIRFARGDLLDPAIDAAIRLKAVLSNPPYIPSGH 206

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EV  F+P+++LDGG DGL  YR +A      L   G  ++EIGYNQ   V  +F
Sbjct: 207 IPSLQREVAGFEPKLALDGGEDGLDLYRRLAFKAGLVLEPGGFVALEIGYNQGEAVSSLF 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
            ++    +   +D  G+DRV+  
Sbjct: 267 AAQGFRDIGLIRDGQGHDRVVTA 289


>gi|167644952|ref|YP_001682615.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter sp. K31]
 gi|167347382|gb|ABZ70117.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter sp. K31]
          Length = 285

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 94/264 (35%), Positives = 145/264 (54%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   D+   L     ++   +I DP  VL + Q   L + + R    E +  I+G + F+
Sbjct: 23  QPAIDARLLLEVAADVTRTDIITDPYRVLTETQMATLNDFLERRAAREPVSHIIGRKGFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ +   PRPETE++VD  L        ++    +LDLG G+G + LA+L E P 
Sbjct: 83  KILLQVNKNVLTPRPETEVIVDEVLK----AFPEQMSFNMLDLGVGSGTILLAVLAERPA 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            KG+G+D+S  AL +A+ NA +  +S R   L+ DW + + +  FD++VSNPPYI + ++
Sbjct: 139 AKGLGIDVSEDALAVARENAASLDLSGRVALLRGDWTNGLGDNGFDLVVSNPPYIATHVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVRD +PR++LDGG DGL  YR +A  + R L    + +VEIGY+Q   V  +F 
Sbjct: 199 ETLEPEVRDHEPRLALDGGPDGLDAYRLLAGEILRVLKPGAMFAVEIGYDQSAAVEALFR 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V   KD   NDRV+   +
Sbjct: 259 EAGAQNVRTIKDLSVNDRVVTGTK 282


>gi|163815256|ref|ZP_02206633.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759]
 gi|158449451|gb|EDP26446.1| hypothetical protein COPEUT_01416 [Coprococcus eutactus ATCC 27759]
          Length = 284

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+       +G++   +  + D  +           I R    E +  I G ++F 
Sbjct: 21  DAEIDAALLWEHASGMNRTDMFFERDRDISTELETGYLELIRRRCTREPLQYITGVQNFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                 S +   PR +TE+LV++AL  +      +  + +LD+  GTG + ++     P 
Sbjct: 81  GYDFCTSENVLIPRQDTEILVETALNLTK---SSQKTLDVLDMCCGTGCIGISYGLLRPD 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K    DIS  A+ + + N        ERFD + +D F  V+G FD+I+SNPPYI+S ++
Sbjct: 138 SKVTLADISGDAIRVTRKNVTKLCDEPERFDVINTDLFGDVDGQFDLILSNPPYIKSDVI 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVRD +PR++LDG  DGL  YR I     +++  +G    EIG +Q  DV  +F 
Sbjct: 198 EALMPEVRDNEPRLALDGKADGLYFYRIIVSQAIKYIKDEGYVVFEIGNDQAEDVQHLFV 257

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V+  +D   NDRV+   
Sbjct: 258 DTGYDDVHVVQDLCRNDRVVYGR 280


>gi|239628685|ref|ZP_04671716.1| modification methylase [Clostridiales bacterium 1_7_47_FAA]
 gi|239518831|gb|EEQ58697.1| modification methylase [Clostridiales bacterium 1_7_47FAA]
          Length = 328

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 130/268 (48%), Gaps = 14/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF-----LTNAIVRSLKHESIHRILG 56
            A  D+   L    G S    +   D  L + +  F         I R  +   +  + G
Sbjct: 54  DAGLDARYLLLEAFGQSLASFLAVKDKALPEDEETFSKCRKYEEMIDRRAERIPLQHLTG 113

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            ++F      ++     PR +TE LV+  L       +K     +LD+ TG+G + ++L 
Sbjct: 114 VQEFMGFEFYVNEHVLIPRQDTETLVELVLKE-----QKGKDAALLDVCTGSGCIAISLA 168

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEG--LFDVIVSNP 172
               +     +D+S +AL +A  NA          F+ ++SD F  +E    +D+IVSNP
Sbjct: 169 LMGGYRDVTALDVSREALAVAARNAQRLLKEHEGEFNLIESDMFERLEPDRRYDIIVSNP 228

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S  ++ L  EVRD++PR++LDG  DGL+ YR +A+G  +HL   G   +EIG++Q 
Sbjct: 229 PYIPSHDIEGLEPEVRDYEPRMALDGTADGLAFYRILAEGCRKHLCPGGCVYMEIGFDQG 288

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             V R+FE +    V   KD  G DRV+
Sbjct: 289 QAVSRMFEMQGYVQVEVMKDMAGLDRVV 316


>gi|238899146|ref|YP_002924828.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466906|gb|ACQ68680.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 285

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L   ++  L   + R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLGYVTGKPRSVLLGFGETKLTVEEQASLEIIVQRRAQGEPIAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +++S  T  PRP+TE LV+ AL         R   R+LDLGTGTG + LAL  E    
Sbjct: 80  LPISVSPVTLIPRPDTECLVEQALKHI-----PRGASRVLDLGTGTGCIALALGHERSDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +G DI  + +++A  NA   G+       Q +WFS+V G F VIVSNPPYI++     
Sbjct: 135 TIIGTDIKEETIKLASHNAKKLGLPH-LSFFQGNWFSAVNGYFSVIVSNPPYIDAEDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R ++P  +L    +GL+  + I      +L   G   +E G+ Q   +  +F   
Sbjct: 194 NKGDLR-YEPLSALVSADEGLADVKHIIRESPHYLTSCGWLLLEHGWQQSDKIQTLFYQT 252

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V+ ++D GG+ RV 
Sbjct: 253 GFSSVSTYRDDGGHPRVT 270


>gi|294635784|ref|ZP_06714244.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC
           23685]
 gi|291090884|gb|EFE23445.1| protein-(glutamine-N5) methyltransferase [Edwardsiella tarda ATCC
           23685]
          Length = 278

 Score =  279 bits (714), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  V+G     ++   ++ L   Q   L   + R  + E +  ++G R+F++
Sbjct: 21  PRRDAEILLEHVSGKGRSFILAFGETRLTAAQLERLAALLARREQGEPVAYLIGQREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL     R       +I+DLGTGTGA+ LAL  E P  
Sbjct: 81  LALEVSPATLIPRPDTECLVEQALQRLPAR-----PAQIVDLGTGTGAIALALASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   V+ + +A+ +A+ NA   G++ R + LQ  WF+ + G  FD+IV+NPPYI++    
Sbjct: 136 RVSAVEFNPEAVALARRNAERLGLA-RVEILQGSWFAPLAGRRFDMIVANPPYIDADDAH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R IA     +L  +G   +E G+ Q   V  +   
Sbjct: 195 LSLGDVR-FEPASALVAAEQGLADLRIIASQAPHYLAAEGWLLLEHGWQQGAAVRALLND 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V + +DYG N+RV L  
Sbjct: 254 VGFSRVESVRDYGDNERVTLGQ 275


>gi|115522191|ref|YP_779102.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisA53]
 gi|115516138|gb|ABJ04122.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisA53]
          Length = 313

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 101/260 (38%), Positives = 146/260 (56%), Gaps = 1/260 (0%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +  V GL   Q+++  + VL   Q   L +   R +  E + RILG ++F+ + 
Sbjct: 52  LDARLLVGEVAGLDLTQLVLAAERVLTPEQAIRLEDFARRRIAGEPVARILGHQEFWGLT 111

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L LS DT  PRP+TE +V++AL  +    + R  +RI DLGTGTGA+ LALL E P  +G
Sbjct: 112 LQLSPDTLVPRPDTETMVEAALDLARDWTD-RAALRIADLGTGTGAILLALLSEWPNARG 170

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V  D+SC+AL  A+ NA   G+  R   +  D+ ++++G FD+IVSNPPYI +  +  L 
Sbjct: 171 VATDLSCEALRTARGNADRLGLGARTRFVACDYAAALKGPFDLIVSNPPYIPAAEIATLA 230

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +EV D DPR +LDGG DGL  YR IA   +  L+  G   VE+G  Q   V  +  +  L
Sbjct: 231 VEVSDHDPRRALDGGDDGLDAYRAIAPQAAALLSPGGALIVEVGQGQSEPVAGLMAASGL 290

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
            L     D GG  R ++  +
Sbjct: 291 TLDAPRPDLGGIFRAVIGRK 310


>gi|325199156|gb|ADY94612.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis G2136]
          Length = 273

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|119472533|ref|ZP_01614581.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Alteromonadales bacterium TW-7]
 gi|119444857|gb|EAW26157.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Alteromonadales bacterium TW-7]
          Length = 279

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V       +   P+ +L   Q+        R L  E +  I G R+F++
Sbjct: 23  AKLDAQVLLLHVLDKPRSYLFTWPERLLSTEQQHSFDTLCARRLSGEPVAHITGQREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE LV++AL   +      +  ++LDLGTGTGA+ LAL  E P +
Sbjct: 83  LTLEVNATTLIPRPDTETLVEAALGLGIS-----ENAKVLDLGTGTGAIALALGSEMPLW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
               VD    A+ +A  N    G+S      QS+WFSS++   FD+IV+NPPYIES    
Sbjct: 138 NITAVDKVTDAVTLATRNQQRLGLS-NVRVKQSNWFSSLDNEYFDLIVTNPPYIESSDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G+S  + I      +L   G   +E GY+Q   V   F++
Sbjct: 197 LAQGDVR-FEPLSALVAEDSGMSDIKQIITHSRDYLLSSGYLLIEHGYDQGFAVREFFKT 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   KD G NDRV L  
Sbjct: 256 MAFVNIKTIKDLGENDRVTLAQ 277


>gi|154482490|ref|ZP_02024938.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC
           27560]
 gi|149736691|gb|EDM52577.1| hypothetical protein EUBVEN_00157 [Eubacterium ventriosum ATCC
           27560]
          Length = 237

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 78/239 (32%), Positives = 121/239 (50%), Gaps = 5/239 (2%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           +DP   +   +       +        +  I G ++F  +   ++ D   PR +TELLV+
Sbjct: 1   MDPMMTVSKERADKYMELVGIRASKIPLQHITGSQEFMGLDFKVNEDVLIPRQDTELLVE 60

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A+ +       +  V +LD+ TG+G + +++ +     K   VD S KAL +AK N   
Sbjct: 61  NAITYIK---SVKGDVDVLDMCTGSGCIAISIDRLCENAKVTAVDFSEKALVVAKENNAL 117

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           N         QSD F +VE  +DVIVSNPPYI++  ++ L  EVR  +P ++LDG  DGL
Sbjct: 118 NKAD--VTFFQSDLFENVEKQYDVIVSNPPYIKTEEIESLMDEVRIHEPMMALDGDCDGL 175

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Y+ IA    ++L  +G+   EIGY+Q   V  I E      +  +KD  GNDRV+  
Sbjct: 176 KFYKKIAKEGRQYLRSNGIIFFEIGYDQGQTVPAILEENGYKDIKVYKDLSGNDRVVTA 234


>gi|28868325|ref|NP_790944.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28851562|gb|AAO54639.1| hemK protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 277

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAAVAFAGYLQRRRTGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +    L S WFS++EG  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRQRLQL-DYAQVLNSHWFSALEGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   RTI      HLN DG   +E GY+Q   V  +   
Sbjct: 194 LSAGDVR-FEPSSALTAGADGLDDLRTIIADAQAHLNADGWLLLEHGYDQGPAVRELLTR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D G ++R+   C+
Sbjct: 253 HGFERIQTRRDLGEHERITFGCK 275


>gi|293433528|ref|ZP_06661956.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|291324347|gb|EFE63769.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
          Length = 277

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + + VD    A+ + + NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLTQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G++    I +     L   G   +E G+ Q   V + F  
Sbjct: 194 LQQGDVR-FEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFIL 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+RV L  
Sbjct: 253 AGYHDVETCRDYGDNERVTLGR 274


>gi|295690768|ref|YP_003594461.1| protein-(glutamine-N5) methyltransferase [Caulobacter segnis ATCC
           21756]
 gi|295432671|gb|ADG11843.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caulobacter segnis ATCC 21756]
          Length = 289

 Score =  278 bits (713), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 93/264 (35%), Positives = 143/264 (54%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   D+   L    G++  +++ DP   L   Q   L   + R  + E +  I+G + F+
Sbjct: 23  QPSIDARLMLEVAAGVTRTEIVTDPYRELTAEQAAMLDEFLTRRARREPVSHIIGRKGFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ +   PRPETE++VD  L        +     +LDLG G+G + LA+L E P 
Sbjct: 83  KILLQVNKNVLTPRPETEVIVDEVLK----AFPEAMPFSMLDLGVGSGTILLAVLAERPA 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            KG+GVD S +AL +A+ NA    ++ R   L  DW + + +  FD++ SNPPYI S ++
Sbjct: 139 AKGLGVDASSEALAVARDNAANLDLNNRATFLHGDWTAGLADASFDLVASNPPYIPSAVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVRD +PR++LDGG DGL  YR +A  + R L   G+ +VEIGY+Q   V  +F 
Sbjct: 199 ETLEPEVRDHEPRLALDGGADGLDAYRLLAPEILRVLKPGGMFAVEIGYDQSKAVESLFN 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V   KD   +DRV+   +
Sbjct: 259 AAGAQQVRTTKDLSTHDRVVTGVK 282


>gi|229519156|ref|ZP_04408599.1| methylase of polypeptide chain release factors [Vibrio cholerae
           RC9]
 gi|229343845|gb|EEO08820.1| methylase of polypeptide chain release factors [Vibrio cholerae
           RC9]
          Length = 286

 Score =  278 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD +L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +       Q  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+      L   G    E GY+Q V V  I  
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPHFLLDGGWLLFEHGYDQGVAVRTILR 256

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   +DY G+DRV 
Sbjct: 257 DLGYQNIITEQDYAGHDRVT 276


>gi|110798817|ref|YP_696881.1| HemK family methyltransferase [Clostridium perfringens ATCC 13124]
 gi|168210132|ref|ZP_02635757.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC
           3626]
 gi|110673464|gb|ABG82451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium perfringens ATCC 13124]
 gi|170711816|gb|EDT23998.1| methyltransferase, HemK family [Clostridium perfringens B str. ATCC
           3626]
          Length = 587

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I +    +         N + +      +  ILG  +F  +
Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKSKMPMQYILGTCEFMGL 383

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEILKENGILAFEIGHDQGEDVKNLMI 559

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582


>gi|114561907|ref|YP_749420.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333200|gb|ABI70582.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 284

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+ + L      +   +   P+  L   Q    +  I +      +  I+G R+F++
Sbjct: 27  AHVDAEALLLHCMNKNRSFLYTWPERQLTSEQFKAYSQMIAKRQSGTPVAHIIGEREFWS 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +  R   ++LDLGTGTGA+ LAL  E P +
Sbjct: 87  LPFIVNESTLIPRPDTEILVETAL-----NLSVRHNAKVLDLGTGTGAIALALASERPKW 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +D   +A+E+AK+N     ++E  + +QSDWFS+VE   FD+IVSNPPYI+     
Sbjct: 142 RITAIDKVPEAVELAKANRGNLNLTE-VEIIQSDWFSAVEQRDFDLIVSNPPYIDEADEH 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G +G +    IA+    HL   G   +E GY Q + V      
Sbjct: 201 LHLGDVR-FEPQSALTAGNEGYADLYYIAEQARAHLLPGGYLLLEHGYEQAIKVREKLIE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 260 LGYQNVATVRDFGSNDRCTLGQ 281


>gi|146283508|ref|YP_001173661.1| methyl transferase [Pseudomonas stutzeri A1501]
 gi|145571713|gb|ABP80819.1| methyl transferase [Pseudomonas stutzeri A1501]
          Length = 275

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      S+  +    +  +           + R  + E +  ILG + F++
Sbjct: 19  ARLDAEWLLAAALNKSTSYLRTWSEREVPAECAERFAADLARRRQGEPVAYILGRQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++DT  PRP+TELLV++AL     ++      R+LDLGTGTGA+ LAL  E P +
Sbjct: 79  LELEVAADTLIPRPDTELLVETAL-----QLLSAAPARVLDLGTGTGAIALALATERPAW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD    A+ +A+ N +  G+        SDWF+ + G  F +IVSNPPYI +    
Sbjct: 134 QVCGVDRVEAAVRLAERNRLRLGL-HNAAFTLSDWFAGLNGERFQMIVSNPPYIPASDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR F+P+ +L  G DGL   RTI    + HL   G   +E GY+Q   V  +  S
Sbjct: 193 LLQGDVR-FEPQSALIAGADGLDDIRTIIAQAAAHLQSGGWLLLEHGYDQAEAVRMLLLS 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V +  D GG++R+ L  
Sbjct: 252 RGFEDVQSRLDLGGHERISLGR 273


>gi|160893850|ref|ZP_02074633.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50]
 gi|156864502|gb|EDO57933.1| hypothetical protein CLOL250_01404 [Clostridium sp. L2-50]
          Length = 292

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 3/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+      V+       I++    + +  R      I +  K   +  I G + F 
Sbjct: 32  DADIDAELLWLFVSKQDKMAYIMNRQEDVTETIRSSYEALIDKRSKRIPLQYITGIQCFM 91

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                 + D   PR +TE+LV+ A    L +    D + +LD+  G+G + L++   +  
Sbjct: 92  GYDFETAPDVLIPRFDTEVLVEQA--NRLIQDIHSDKMSVLDMCCGSGCIGLSVALMNQD 149

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  A+ +   NA    VS+ +  ++SD F  ++  +D+I+SNPPYIES ++D
Sbjct: 150 IHIDLCDISDSAIALTTKNAKRLEVSD-YTVIKSDLFDKIDKRYDMILSNPPYIESKVID 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRD++PR++LDG  DGL  YR I +    +LN+ G    EIG +Q  DV ++   
Sbjct: 209 GLMPEVRDYEPRLALDGDADGLKFYRAIIENAESYLNEKGYILFEIGNHQAHDVQQLLVD 268

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    V   KD   NDRV++  +
Sbjct: 269 KHFEDVRVVKDLAENDRVVIGRK 291


>gi|15896139|ref|NP_349488.1| S-adenosylmethionine-dependent methyltransferase, HEMK ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|15025933|gb|AAK80828.1|AE007786_1 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog
           [Clostridium acetobutylicum ATCC 824]
 gi|325510293|gb|ADZ21929.1| S-adenosylmethionine-dependent methyltransferase [Clostridium
           acetobutylicum EA 2018]
          Length = 285

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + DS   L  V       +I + +  +++       + I    K   I  I    +F  +
Sbjct: 23  MEDSQILLSYVLKKDRIFLITNREYEIEENSLKQYFDYINMRKKKMPIRYITEKCEFMGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRP+TE+LV++ L +    IE  +  ++ D+ TG+GA+ L++ K +   +
Sbjct: 83  DFHVEKGVLIPRPDTEILVEAVLEY----IELNNYKKVCDVCTGSGAIGLSIAKYAKDVE 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
            +  DIS  A+ ++K N     + +R      D           FD++VSNPPYI    +
Sbjct: 139 VLCSDISPDAIRVSKINRQGLNLEDRVKIENGDLLEKPIERGEKFDIVVSNPPYIREDEI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+D++P I+L GG DGL  YR I     + L   GL + EIG ++  +V  I E
Sbjct: 199 PKLMDDVKDYEPIIALVGGEDGLDFYRRITSMSKKVLKPGGLIAYEIGSDEANEVSNILE 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     +   KD+   DRV+L  R
Sbjct: 259 NEGFVSIETRKDFARMDRVVLAVR 282


>gi|261400801|ref|ZP_05986926.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC
           23970]
 gi|269209402|gb|EEZ75857.1| protein-(glutamine-N5) methyltransferase [Neisseria lactamica ATCC
           23970]
          Length = 273

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+G V + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGTVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|165924032|ref|ZP_02219864.1| protein methyltransferase HemK [Coxiella burnetii RSA 334]
 gi|212219473|ref|YP_002306260.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuK_Q154]
 gi|165916517|gb|EDR35121.1| protein methyltransferase HemK [Coxiella burnetii RSA 334]
 gi|212013735|gb|ACJ21115.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuK_Q154]
          Length = 277

 Score =  278 bits (712), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   S   +   P+  L+  Q+  L+  + R LK E I  ILG ++F++
Sbjct: 22  PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRPETE+LV+  L      + K + +RI DLGTG+GAV LA+  E P +
Sbjct: 82  LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D S  AL+IA+ NA  + +    +  Q +W  ++    +  IV NPPYI      
Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYQGEWCQALPRRDYHAIVGNPPYIPDKDQH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +PR +L  G DGLS  + I      +L   G   +E GY+Q   ++ + ++
Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D  G  R+++  R
Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276


>gi|261393389|emb|CAX51025.1| putative protein methyltransferase HemK (protein-glutamine
           N-methyltransferase HemK; protein-(glutamine-N5) MTase
           HemK; M.StyLTHemKP) [Neisseria meningitidis 8013]
          Length = 423

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 163 PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 222

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 223 RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+I SNPPYIE+  
Sbjct: 277 FVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIASNPPYIENGD 334

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 335 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416


>gi|148359877|ref|YP_001251084.1| protein methyltransferase HemK [Legionella pneumophila str. Corby]
 gi|296107927|ref|YP_003619628.1| HemK protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148281650|gb|ABQ55738.1| protein methyltransferase HemK [Legionella pneumophila str. Corby]
 gi|295649829|gb|ADG25676.1| HemK protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 287

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC V   +   +   PD+++   Q       I +  +   I  I G R+F+
Sbjct: 21  ETKLEAELLLCHVLNKNRAYLFAHPDALVSPEQIETYLQMIKQRAEGLPIAYITGQREFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++ +   PR ETE LV+ AL      I  ++ V +L+LGTG+GA+ LAL KE P 
Sbjct: 81  SLSLKVTPNVLIPRHETERLVELALEL----IPDKENVSVLELGTGSGAIALALAKERPL 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           +     D S +ALE+A+ NA T G+    +   S WF+++    +  IVSNPPYI     
Sbjct: 137 WHIDACDFSKEALELARYNAKTLGL-NNINFCHSYWFNNLPLKQYHAIVSNPPYIAENDP 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    DGL+  + I      +L  DGL  VE G+ QK ++  I  
Sbjct: 196 HLKKGDVR-FEPTSALVSSQDGLADLQYIIQHSYEYLLPDGLLLVEHGFEQKNEISAILN 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 ++ ++D  G+DRV    R
Sbjct: 255 QLGYKNIHCWQDLQGHDRVSGGQR 278


>gi|294670647|ref|ZP_06735523.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307617|gb|EFE48860.1| hypothetical protein NEIELOOT_02370 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 271

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  VTG +  Q+I     +LD+ Q   L     R L  E +  ILGWR+FY  R 
Sbjct: 16  EARMLLQAVTGWTRAQLITRDGEMLDEGQTADLQAMQQRRLNGEPMAYILGWREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
             +  T  PRPETE LV++AL    P+        + DLGTG+GAV + L  E P    +
Sbjct: 76  RTTPATLIPRPETEHLVEAALQHLPPQ------GLVWDLGTGSGAVAVTLACERPDASVL 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVD 181
             DIS  AL +A+ NA  NG           WF     S +  FD++VSNPPYIE+    
Sbjct: 130 ASDISPAALAVARQNAADNGAD--VSFACGSWFDIDRPSEKHGFDLLVSNPPYIEADDGH 187

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L    DGLS  R +A   + +L   G   +E G+NQ   V +I  +
Sbjct: 188 LQQGDLR-FEPANALTDFSDGLSCIRELAAHGAEYLKPGGRLIMEHGWNQGAAVRQILAA 246

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +    D  G +R+    +
Sbjct: 247 AGWTEIETQTDLAGLERITQGRK 269


>gi|261381287|ref|ZP_05985860.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava
           NJ9703]
 gi|284795767|gb|EFC51114.1| protein-(glutamine-N5) methyltransferase [Neisseria subflava
           NJ9703]
          Length = 270

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G +  Q++      L +     L     R LK E +  +LG R+FY 
Sbjct: 13  PKNEARMLLQYALGYTRAQLVTRGTDDLAESDLQILEALAQRRLKGEPMAYLLGEREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PR ETE LV++ L             R+ DLGTG+GA+ + +  E    
Sbjct: 73  RRFTVNPHVLIPRHETEHLVEAVLKRL------PSQGRVWDLGTGSGAIAVTIALERGDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  AL+ A+ NA   G   + +  Q  WF      EG +DVIVSNPPYIE   
Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDKPSEGRYDVIVSNPPYIEDGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I 
Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGKAVRNIM 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  V   +D  G DRV L  
Sbjct: 244 LENGFAEVATEQDLAGLDRVTLGR 267


>gi|323143930|ref|ZP_08078588.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Succinatimonas hippei YIT 12066]
 gi|322416294|gb|EFY06970.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Succinatimonas hippei YIT 12066]
          Length = 273

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 129/259 (49%), Gaps = 13/259 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V       +I   +  L +R      + I R  + E I  ILG+++F+ 
Sbjct: 22  ARLDADLLLMEVLHCPRSYLITHDNEELKERAIVRFRDLISRRSRGEPIAYILGYKEFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ +   PRP+TELLV++AL F       + V  +LDLGTG+GA+ L++  E P  
Sbjct: 82  LPFKVNRNVLIPRPDTELLVETALKF-------KQVKSVLDLGTGSGAIILSIKYERPDI 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
             +  DIS  AL++AK NA++ G+       +S WFS ++   FD+IVSNPPYIE     
Sbjct: 135 NALACDISDAALQVAKENALSLGLD--VTFFKSSWFSDIKNAKFDLIVSNPPYIEENDEH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +   F+P  +L  G DGL   R IA       N  G   +E GYNQ  DV  I E 
Sbjct: 193 L---KALSFEPVGALISGKDGLDDIRIIAKDSRHFFNPGGALLLEHGYNQGKDVRNILEE 249

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +   +D G N+RV 
Sbjct: 250 CGFNEIKTLRDLGSNERVT 268


>gi|237799728|ref|ZP_04588189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331022583|gb|EGI02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 277

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    L    G     +   P+ ++           + R    E +  ILG + F+ 
Sbjct: 19  ARLDIELLLAAALGKPRSFLHTWPERIVSTEAALAFAGYLERRRAGEPVAYILGQQGFWK 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 79  LDLEVAPHTLIPRPETEMLVEAALEL----VPAFASAQVLDLGTGTGAIALALANERQQW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   VD   +A+ +A+ N     + +  + L S+WFS+++G  FD+I+SNPPYI      
Sbjct: 135 KVTAVDRVPEAVALAERNRKRLHL-DNAEVLDSNWFSALQGRQFDLIISNPPYIADADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I      HLN +G   +E GY+Q   V  +   
Sbjct: 194 LAAGDVR-FEPSSALVAGSDGLDDLREIIRQAPTHLNAEGWLLLEHGYDQGPAVRELLIR 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    +   +D G ++R+   C+
Sbjct: 253 QGFERIQTRRDLGEHERITFGCK 275


>gi|261821676|ref|YP_003259782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261605689|gb|ACX88175.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pectobacterium wasabiae WPP163]
          Length = 281

 Score =  278 bits (712), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   V+   ++ L   ++  LT  + R    E I  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRTFVLAFGETELRAAEQQQLTELLARRELGEPIAYLIGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL         +    +LDLGTGTGA+ LA+  E    
Sbjct: 80  LPLVVSPATLIPRPDTECLVEQALLRL-----PKKPCDVLDLGTGTGAIALAIASERHDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             VGVD+  +A+ +A  NA    + +    L   W+S +E   F +I SNPPYI++  V 
Sbjct: 135 LVVGVDLQPEAVALATKNAQQLRL-DNARFLPGSWYSPLEHRRFALIASNPPYIDADDVH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L    +GL+  R I +    +L   G   +E G+ Q   V ++ ++
Sbjct: 194 LSQGDVR-FEPASALVAADNGLADLRIIIESAPHYLEVGGWLLLEHGWQQGDAVRQLLQA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    +   +DYGGNDRV L  
Sbjct: 253 RGFTQLETCQDYGGNDRVSLGR 274


>gi|121635723|ref|YP_975968.1| hemk protein [Neisseria meningitidis FAM18]
 gi|120867429|emb|CAM11201.1| hemk protein [Neisseria meningitidis FAM18]
          Length = 423

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   +  +  Q++      + D  R        R L  E +  +LGWR+FY 
Sbjct: 163 PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYG 222

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 223 RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 276

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  +LE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 277 FVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 334

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 335 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 393

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 394 AENGFSGVETLPDLAGLDRVTLG 416


>gi|94971497|ref|YP_593545.1| HemK family modification methylase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553547|gb|ABF43471.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 280

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 10/260 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L          +   P+  L   ++     AI R    E    I G ++FY     
Sbjct: 26  AELLLMFSLNCDRAYLFTYPERELTADEQARYDEAIARRCHGEPAQYITGHQEFYGRDFL 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETE L+++ L  +   +       +LD+GTG+G +   L KE P  K   
Sbjct: 86  VSPAVLIPRPETEHLIEAVLELAPREVRW----EVLDVGTGSGCIAATLAKEFPRMKVTA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +AL+IA++NA    +  + +   SD  S++E    FD+IVSNPPY+     D + 
Sbjct: 142 VDISPEALQIAQANAAR--LEAQVEFRVSDLLSAIEPGRQFDMIVSNPPYVGECEADKVQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +V+DF+P  ++ GG  G+   + +A  V  HL   G   +EIGY+    V  I      
Sbjct: 200 RQVKDFEPHCAVFGGERGMDIIKRLAPQVWEHLKPGGWFLMEIGYSIADPVHEIMRD--W 257

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  RV++  +
Sbjct: 258 TNFKVVPDLRGIPRVVVGRK 277


>gi|169335809|ref|ZP_02863002.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258547|gb|EDS72513.1| hypothetical protein ANASTE_02235 [Anaerofustis stercorihominis DSM
           17244]
          Length = 279

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 5/242 (2%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
             I D +  L D +       + +   H     I G ++F  +   +  +T  PRPETE+
Sbjct: 40  FFITDLNYELTDEEINEYEQLVNKRCAHVPFGYITGIKEFMGLDFHVDRETLIPRPETEI 99

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V+  +        K   + IL++G G+G + ++  K       +GVDI+ KAL IA  N
Sbjct: 100 IVEYMIEHF-----KGITLDILEIGVGSGCISISTAKYLENVNILGVDINEKALSIANKN 154

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              + V +R   ++SD + +VEG FDVI+SNPPYI   I++ L  +V+ ++P ++LDGG 
Sbjct: 155 IEYHNVDDRVKFIRSDIYENVEGKFDVIISNPPYIRKDIIETLEDDVKKYEPILALDGGE 214

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL  YR I    S++LN+ G    EIGY+Q   V  +        +    D  G DR +
Sbjct: 215 DGLYFYREIIKNASKYLNESGHIIFEIGYDQGEQVKDLLIQNNFTNIEIINDLAGFDRTV 274

Query: 261 LF 262
           + 
Sbjct: 275 VG 276


>gi|296313419|ref|ZP_06863360.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea
           ATCC 43768]
 gi|296840050|gb|EFH23988.1| protein-(glutamine-N5) methyltransferase [Neisseria polysaccharea
           ATCC 43768]
          Length = 273

 Score =  278 bits (711), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 123/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q+++     + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLMRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAYGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|241763795|ref|ZP_04761841.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
 gi|241366927|gb|EER61332.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
          Length = 284

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 118/258 (45%), Gaps = 8/258 (3%)

Query: 6   DSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L             ++      L    +        R    E +  + G ++FY 
Sbjct: 24  DAQMLLLHALARPEAGRAWLLAHDTDALAPEVQAQFLGLCQRRAAGEPVAYLTGRKEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + +   +PRP+TE LVD AL    P  + +   RI+DLGTG+GA+ LAL  + P  
Sbjct: 84  LPLCVDARVLDPRPDTETLVDWALEVIAPLSDPQHPPRIVDLGTGSGAIALALQHQRPTA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +GVD S  AL +A++NA    +  +F  +QS W + V+G+FD IVSNPPYI +     
Sbjct: 144 EVLGVDASPDALAVAQANAQRLVLPVQF--VQSHWLTGVDGVFDAIVSNPPYIPAHDPHL 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P  +L  G DGL   R I     RHL   G   +E G++Q   V  +  ++
Sbjct: 202 ---AALTHEPLQALASGADGLQDIRQIVVQAPRHLKPGGWLLLEHGHDQAGAVSALLRAQ 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V +  D  G  R  
Sbjct: 259 GFAQVQSRNDLAGIARCT 276


>gi|254520298|ref|ZP_05132354.1| modification methylase [Clostridium sp. 7_2_43FAA]
 gi|226914047|gb|EEH99248.1| modification methylase [Clostridium sp. 7_2_43FAA]
          Length = 587

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 123/262 (46%), Gaps = 7/262 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L  V       +I + D  +  +        I +      I  ILG  +F  +
Sbjct: 326 ILDAQLLLGNVLAKDKLYIITNRDKNVSLKDEKEYFELIEKRKNKMPIKYILGETEFMGL 385

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE+LV+  L+     I + D + + DL +G+GA+ +++        
Sbjct: 386 DFNVEEGVLIPRGDTEILVEEVLSI----INEEDELNVCDLCSGSGAIGISIANYRKKIN 441

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180
              +D      ++ K N + +G+  R   ++SD      +    +DVIVSNPPYI++  +
Sbjct: 442 VEEIDFYEVPEKVTKKNIIKHGLESRVKFIKSDLLKEPINQGKKYDVIVSNPPYIKADEI 501

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+ ++P  +LDGG DGL  Y+ I +     LN +G+ + EIGY+Q  +V  + +
Sbjct: 502 SNLMDDVKKYEPHTALDGGDDGLVFYKRIIEESKTTLNNEGVLAFEIGYDQGEEVSNLMK 561

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
               + +   KD  G DRV+L 
Sbjct: 562 EAGFYNIKLVKDLAGLDRVVLG 583


>gi|309379284|emb|CBX22057.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 273

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  +LGWR+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  AVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVC 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G +   +     WF      EG +D+IVSNPPYIE+     
Sbjct: 130 ASDISPSALETARKNAADLGAA--VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDEHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266


>gi|258513429|ref|YP_003189651.1| modification methylase, HemK family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777134|gb|ACV61028.1| modification methylase, HemK family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 289

 Score =  278 bits (711), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 9/270 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  + G+    + +  D VL   +       I R +K E +  + G ++F 
Sbjct: 21  NASLDAEVLLMHLLGIERAGLYMRFDYVLTLEEAKAYRCLIERRVKGEPVAYLTGHKEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PRPETE+LV+ AL F     +  + + +LD+GTG+GA+ +++ + +  
Sbjct: 81  GMDFIVNPAVLVPRPETEILVERALKFL--EGKPGEELLVLDIGTGSGAIAVSMARMNSR 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176
            +   VD S  AL +A+ NA  +GV+ R      D         +EG  D+I +N PY+ 
Sbjct: 139 LRVYAVDCSRDALVLAQHNAAIHGVAGRIHFFHGDLLYPLSNLALEGKADLIAANLPYVP 198

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +  L ++VR ++P+I+L+GG+DGL  YR +  G    L   GL  +EIG  Q   +V
Sbjct: 199 SGDISGLPVDVRSYEPQIALNGGLDGLDIYRRLLPGAGDLLKSGGLLMLEIGPGQADVLV 258

Query: 237 RIFESRKLFLV--NAFKDYGGNDRVLLFCR 264
           +      +         DY G +RV+L  +
Sbjct: 259 QEMTGMGMVWCCSEIVFDYAGRERVVLAEK 288


>gi|182623922|ref|ZP_02951710.1| methyltransferase, HemK family [Clostridium perfringens D str.
           JGS1721]
 gi|177910815|gb|EDT73169.1| methyltransferase, HemK family [Clostridium perfringens D str.
           JGS1721]
          Length = 587

 Score =  277 bits (710), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I +    +         N + +      +  ILG  +F  +
Sbjct: 324 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKLKMPMQYILGTCEFMGL 383

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 384 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 439

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 440 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 499

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 500 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 559

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 560 EKGYYDVKVIKDLAGLDRCVIGR 582


>gi|29655247|ref|NP_820939.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii RSA 493]
 gi|161830961|ref|YP_001596009.1| protein methyltransferase HemK [Coxiella burnetii RSA 331]
 gi|29542519|gb|AAO91453.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii RSA 493]
 gi|161762828|gb|ABX78470.1| protein methyltransferase HemK [Coxiella burnetii RSA 331]
          Length = 277

 Score =  277 bits (710), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   S   +   P+  L+  Q+  L+  + R LK E I  ILG ++F++
Sbjct: 22  PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRPETE+LV+  L      + K + +RI DLGTG+GAV LA+  E P +
Sbjct: 82  LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D S  AL+IA+ NA  + +    +    +W  ++    +  IV NPPYI      
Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +PR +L  G DGLS  + I      +L   G   +E GY+Q   ++ + ++
Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D  G  R+++  R
Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276


>gi|325205014|gb|ADZ00468.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240355]
          Length = 273

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+     
Sbjct: 130 ASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266


>gi|255658856|ref|ZP_05404265.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM
           20544]
 gi|260849259|gb|EEX69266.1| protein-(glutamine-N5) methyltransferase [Mitsuokella multacida DSM
           20544]
          Length = 291

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 3/264 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V       + V  D  L   +       I + +    + +ILG ++F  
Sbjct: 27  PRLDAEVLLAHVLEKQRIYLYVHFDEPLQPGELAAYREMIKKRVLRVPVAQILGEKEFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +++DT  PRP+TE+LV +A+   L  +   + +R  D+GTG+GA+CL++L      
Sbjct: 87  LTFKVTADTLVPRPDTEILVQAAVDR-LRAMAGEEPLRFADIGTGSGAICLSVLHYLSGT 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VDIS  A  +A+ NA + G+++R      D    + G+ F  I+SNPPYI    + 
Sbjct: 146 VADTVDISPAARAVAEENAASLGLADRITFHTGDLLQPLSGISFAAILSNPPYIPEADIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P  +L GG DGL  YR +A+     L   G  + E+G +Q  DV  + ++
Sbjct: 206 KLAPEVRLKEPHTALSGGQDGLDFYRRLANEAPAMLVPGGFTAFEVGIHQAGDVADLLKA 265

Query: 242 RKLFL-VNAFKDYGGNDRVLLFCR 264
             L        DY G DRV++  R
Sbjct: 266 NPLIDRTEILPDYAGIDRVVVGWR 289


>gi|308390164|gb|ADO32484.1| hemk protein [Neisseria meningitidis alpha710]
          Length = 273

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|18311185|ref|NP_563119.1| hypothetical protein CPE2203 [Clostridium perfringens str. 13]
 gi|18145868|dbj|BAB81909.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 569

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I +    +         N + +      +  ILG  +F  +
Sbjct: 306 ILDTQLLLGKVLEKDKIWLITNKSEEVKKSDEIHFLNLLEKRKLKMPMQYILGTCEFMGL 365

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE++V+  L      I++   + + DL  G+GA+ L+L        
Sbjct: 366 DFYVEEGVLIPRGDTEIIVEEVLN----NIDEDAEINVCDLCCGSGAIGLSLANYRKNII 421

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VDI     ++ + N     +S+R   ++SD  S V      +D++VSNPPYI + ++
Sbjct: 422 VDLVDIDDIPEKVTRKNIRELELSKRCGFIKSDLLSEVIKKGNKYDILVSNPPYIRTEVI 481

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+D++P ++LDGG DGL  YR I D     L ++G+ + EIG++Q  DV  +  
Sbjct: 482 NTLMEDVKDYEPHLALDGGEDGLIFYRRIIDESLEVLKENGILAFEIGHDQGEDVKNLMI 541

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
            +  + V   KD  G DR ++  
Sbjct: 542 EKGYYDVKVIKDLAGLDRCVIGR 564


>gi|262372380|ref|ZP_06065659.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter junii SH205]
 gi|262312405|gb|EEY93490.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter junii SH205]
          Length = 272

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 10/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            +++   L  + G++S ++ +  +  L + Q     N + R    E +  + G + F+ +
Sbjct: 18  RQEAAWLLEHILGINSLELKLRLEQELTEIQEQAYLNGLARIDHGEPLAYVTGSQPFWTL 77

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ DT  PRP+TE+L+++ L   L          ++DLGTGTGA+ LAL  E P +K
Sbjct: 78  DLKVTHDTLVPRPDTEILIETVLKLELDSTSN-----VVDLGTGTGAIALALASERPQWK 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDC 182
               DI    LE+A+ NA+ +G++         WF ++E  F D+IVSNPPYI+   V  
Sbjct: 133 VTATDIYQPTLEVAQENAIRHGLTH-VKFACGAWFDALEKQFFDLIVSNPPYIDPEDVHM 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P  +L     GL+   TI       LN +G   +E GY+Q   V  +FE  
Sbjct: 192 QM---LKSEPERALIADKQGLADLETIIVQGKSWLNPNGWIVLEHGYDQGEAVRTMFEKE 248

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +   KDYGGNDRV L  +
Sbjct: 249 GFSQIQTIKDYGGNDRVSLGQK 270


>gi|291334338|gb|ADD93997.1| hemK protein [uncultured marine bacterium MedDCM-OCT-S11-C310]
          Length = 289

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 5/259 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L R    +   ++  P+ V  +         + R    E +  ILG ++FY 
Sbjct: 26  PKLDAEILLARALDKNRSYLMTWPEKVPSNAVVSEFQRWLSRRADCEPVAYILGDQEFYG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PRPETE LV+ AL +   R    D  +ILDL TG+G V L L  E P  
Sbjct: 86  HLFQVSPAVLIPRPETEHLVEKALGWCRDR--GTDSPKILDLCTGSGCVGLTLALELPKA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
                D+S +AL +A+ NA T+ V ER    + D F S+     FD++++NPPY+E    
Sbjct: 144 SVTLTDLSPEALAVARHNADTHDVDERVRFFEGDLFESLPEGERFDLVLANPPYVEESFR 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  +V D++P ++L    DGL+  R I     ++LN+ GL ++E+G  Q   V  +  
Sbjct: 204 GEMQKDVLDYEPHLALFAQDDGLNLIREIVTQSPKYLNQPGLLAMEMGSGQSARVRSLL- 262

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                     +D GG+DR+
Sbjct: 263 GPSWKNPGIIQDLGGHDRI 281


>gi|325129314|gb|EGC52151.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis OX99.30304]
 gi|325135296|gb|EGC57917.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M0579]
 gi|325201297|gb|ADY96751.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240149]
 gi|325208917|gb|ADZ04369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis NZ-05/33]
          Length = 273

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+     
Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 LQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266


>gi|325107094|ref|YP_004268162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Planctomyces brasiliensis DSM 5305]
 gi|324967362|gb|ADY58140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Planctomyces brasiliensis DSM 5305]
          Length = 309

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +S   L         Q+  +  +V+ +  R  +   + R ++ E +  ++G ++FY+
Sbjct: 45  PRLESEILLAHAQKCPRIQLYANYHTVVSEETRAQMRELVKRRVRREPVAYLVGHKEFYS 104

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +    F PRPETE L++  L    P     +   IL+L TG+G + + L K  P  
Sbjct: 105 LEFAVEPGVFIPRPETETLINQGLEKLTPV----ERPHILELCTGSGCIAVTLAKRLPKA 160

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179
           + + V+ +   L +++SNA  + V +R   L+ D F+ V      FD+IVSNPPYI S  
Sbjct: 161 RVIAVEKNPIPLRVSRSNAEKHQVDDRVQILEGDLFAPVPTDGPRFDLIVSNPPYIRSDE 220

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +VR+ +P  +LDGG DGL   R I     ++L   G   +E+   Q      I 
Sbjct: 221 IPGLVADVREHEPHAALDGGADGLDMIRVIIAQAPKYLKPGGWLMLEMDPAQIEATHDIA 280

Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260
              R+     A++D   ++R +
Sbjct: 281 RQSRQWTTQQAYRDLFEDERCI 302


>gi|319639481|ref|ZP_07994230.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102]
 gi|317399247|gb|EFV79919.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa C102]
          Length = 270

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 118/264 (44%), Gaps = 12/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L      +  Q++      L +     L     R LK E +  +LG R+FY 
Sbjct: 13  PKNEARMLLQYALSYTRAQLVTRGTDDLAESALQTLETLAQRRLKGEPMAYLLGEREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++     PRPETE LV++ L    P+       R+ DLGTG+GA+ + +  E    
Sbjct: 73  RRFAVNPHVLIPRPETEHLVEAVLKRLPPQ------GRVWDLGTGSGAIAVTVALERVDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  AL+ A+ NA   G   + +  Q  WF      EG +DVIVSNPPYIE   
Sbjct: 127 DVRASDISVGALDTARQNAAELGA--KVEFAQGSWFDTDRPSEGRYDVIVSNPPYIEDGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+ +L    DGLSH R I     ++L  +G    E GY+Q   V  I 
Sbjct: 185 EHLSQGDLR-FEPQNALTDFSDGLSHIRHITQEAPKYLKANGWLLFEHGYDQGEAVRNIM 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  V   +D  G DRV L  
Sbjct: 244 LENGFAEVATEQDLAGLDRVTLGR 267


>gi|320538899|ref|ZP_08038575.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Serratia symbiotica str. Tucson]
 gi|320031059|gb|EFW13062.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Serratia symbiotica str. Tucson]
          Length = 282

 Score =  277 bits (709), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q+  L   +VR  + E +  ++G R+F++
Sbjct: 20  PRRDAEILLGFVTGRARTFLLAFDETRLTPHQQQQLEALLVRREQGEPVAYLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP++E LV  AL              ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLSVSPATLIPRPDSECLVALALERL-----PIASCHILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             +GVD+   AL +A+ NA    +S     LQ +WFSS+    F +I SNPPYI++    
Sbjct: 135 TVIGVDVQPDALALAQHNARKLTIS-NVQFLQGNWFSSLAPQHFALIASNPPYIDADDAH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     +HL   G   +E G+ Q   V  +  +
Sbjct: 194 LTQGDVR-FEPASALVAAQQGLADLDAIVRQAPQHLQPQGWLLLEHGWQQGRSVRALMLA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V  ++DYG N+RV L  
Sbjct: 253 AGFMAVATYRDYGNNERVTLGQ 274


>gi|153956300|ref|YP_001397065.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219856617|ref|YP_002473739.1| hypothetical protein CKR_3274 [Clostridium kluyveri NBRC 12016]
 gi|146349158|gb|EDK35694.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219570341|dbj|BAH08325.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 288

 Score =  276 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 8/261 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + DS   L +        ++++ D  +   +       +    +   +  ILG  +F  +
Sbjct: 27  ILDSQLLLGKAINKDRLFIVINADHKVTREEAEKYYYYLKLREEKMPVKYILGQCEFMGM 86

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRP+TE LV++AL      I+  +   I DL  GTGA+ ++L K      
Sbjct: 87  DFIVKPGVLIPRPDTETLVENALE----EIDNNEFYNICDLCCGTGAIGISLAKFVEHIN 142

Query: 124 GVGVDISCKALEIAKSNAVTNG-VSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
            V  DIS  A E+A+ N      +++R   ++SD        +  F++IV NPPYI+  +
Sbjct: 143 VVCCDISDTACEVAEQNVRRYYSLNKRISIVKSDLMEYFILNKIKFNMIVCNPPYIKESV 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  +V++++P  +L GG DGL  YR I     + L K+G+   EIGY+QK DV  I 
Sbjct: 203 IDTLMEDVKNYEPHEALSGGEDGLEFYRKIVKQSLKVLTKNGMLMFEIGYDQKKDVTSIL 262

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                      KD  G DRV+
Sbjct: 263 MKYGFKNTTCIKDLAGKDRVI 283


>gi|95929012|ref|ZP_01311757.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM
           684]
 gi|95134913|gb|EAT16567.1| modification methylase, HemK family [Desulfuromonas acetoxidans DSM
           684]
          Length = 293

 Score =  276 bits (708), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 2/258 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +          + +  D  L  ++   +   + R  K E +  I+G  +F++
Sbjct: 26  PRLDAELLIGDALNKDRVGLYLCYDQPLQPQELTKIRQLVARRAKREPLQYIVGHTEFWS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PR +TE+LV+ AL         +    +LD+GTG+GA+ +AL    P  
Sbjct: 86  LPFKVAPGVLIPRGDTEILVEEALRLLEDNTTSQQP--VLDVGTGSGAIAVALAHSCPDL 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD+  +AL  A++NA  NGV+ER    Q D      G + ++VSNPPYI    +D 
Sbjct: 144 QVEAVDLQPEALAQAQANAELNGVAERLSFRQQDMAVLSGGPYRLVVSNPPYIREDEMDG 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ +P ++L  G DGL  YR + +     L   G   VE+G  Q  DV  +    
Sbjct: 204 LMPEVREHEPAVALQAGSDGLDCYRLLCEQALNLLIPGGWLLVEVGAGQADDVAALMVRH 263

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L      +DY G  RV+
Sbjct: 264 GLPETFQREDYNGIVRVV 281


>gi|255525834|ref|ZP_05392763.1| modification methylase, HemK family [Clostridium carboxidivorans
           P7]
 gi|255510477|gb|EET86788.1| modification methylase, HemK family [Clostridium carboxidivorans
           P7]
          Length = 290

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 16/275 (5%)

Query: 2   QALR---------DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52
           +ALR         D    L +V       ++++ D  +   +     N I    +   I 
Sbjct: 17  EALRSVGIDSYQIDCELLLGKVIKKDRLFILLNRDYKVTVNEEQEYCNFINLRKQKMPIK 76

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            ILG  +F  +   +      PRP+TE+LV+ A+      I+++ +    D+  G+GA+ 
Sbjct: 77  YILGECEFMGLDFYIKEGVLIPRPDTEVLVELAIKC----IKEQKLKNACDVCCGSGAIG 132

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIV 169
           +++ K     K    DIS  A E+   N     +  + + ++SD    F + +  FD+I+
Sbjct: 133 ISIAKFVEDIKVKCSDISNIAYEVTLENIKRFELEHKVEVIKSDLLNYFINNKEKFDIII 192

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI   ++  L  +V++++P  +L GG DGL  YR I     + LN +G    EIGY
Sbjct: 193 SNPPYIREDVIPTLMEDVKNYEPYEALSGGQDGLDFYRKITLQSLKLLNNNGFLLFEIGY 252

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +QK  V  I E      ++  KD  G DRV+   R
Sbjct: 253 DQKDSVSSILEQNGFTDISCIKDLAGKDRVIKGKR 287


>gi|163847181|ref|YP_001635225.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus aurantiacus J-10-fl]
 gi|222525022|ref|YP_002569493.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus sp. Y-400-fl]
 gi|163668470|gb|ABY34836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus aurantiacus J-10-fl]
 gi|222448901|gb|ACM53167.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chloroflexus sp. Y-400-fl]
          Length = 283

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  + G S  +V+ + D VL   Q       I R    E +  ++G R+F+ 
Sbjct: 21  ARLDAELLLAHILGWSRAKVVAERDHVLTPEQEMAFNALIERRANREPVAYLIGHREFFG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETELLV+  L  +  +      + I D+GTG+GA+ +AL    P  
Sbjct: 81  LDLFVDRRVLIPRPETELLVELTLKEA--QRFNHTPLIIADIGTGSGAIAIALAMHLPHA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              GVDIS  AL +A  N     + +R   L+ D  + +    D++VSNPPY     +D 
Sbjct: 139 LIYGVDISPDALAVAAINVTRYRLDDRIRLLEGDLCTPLPAPVDILVSNPPYTILTEIDE 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
               V   +P ++LDGG DGL  YR +      +L  +G   +EIG  Q   VV +    
Sbjct: 199 ---GVYRHEPHLALDGGSDGLDCYRRLIAAAPTYLKPNGAILLEIGSTQAASVVHLLRQA 255

Query: 243 -KLFLVNAFKDYGGNDRVLLFC 263
             +      +D  G+DR++   
Sbjct: 256 LPMAETGIERDLAGHDRIVWAR 277


>gi|325143479|gb|EGC65800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M01-240013]
 gi|325206969|gb|ADZ02422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M04-240196]
          Length = 273

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+I SNPPYIE+  
Sbjct: 127 FVRTSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIASNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLLQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|206578511|ref|YP_002237909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella pneumoniae 342]
 gi|206567569|gb|ACI09345.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella pneumoniae 342]
          Length = 282

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F++
Sbjct: 20  PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLIGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALAR-LPAVPC----RILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++    
Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274


>gi|260426432|ref|ZP_05780411.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Citreicella sp. SE45]
 gi|260420924|gb|EEX14175.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Citreicella sp. SE45]
          Length = 282

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 123/262 (46%), Gaps = 11/262 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+   L  V G++  ++ +     +           I R    E +  + G R+FY
Sbjct: 22  DAARDARRLLAHVLGVAPGRLTLVLPDPVGAGAAGRYETLIARRAAREPVSHLTGRREFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++SD  +PRPETE LV  AL+            R+LDLGTGTG + L LL E   
Sbjct: 82  GRAFHVTSDVLDPRPETETLVAEALS--------APFARVLDLGTGTGCILLTLLAERAT 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
             G+G D+S  AL +A  N    G+  R    Q  WF ++    G FD+IVSNPPYI   
Sbjct: 134 ATGIGTDLSEAALAVATRNRDALGLDGRATLGQGSWFEALPEGSGPFDLIVSNPPYIALD 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  EVRD +P ++L  G DGL+ YR I      HL   G   VEIG  Q   V  +
Sbjct: 194 EMAGLSPEVRDHEPHMALTDGGDGLAAYRAITRDAPAHLAPGGRLMVEIGPTQGPAVAAL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                L  V   +D  G DRV+
Sbjct: 254 MTGAGLADVTVLQDLDGRDRVV 275


>gi|288934822|ref|YP_003438881.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella variicola At-22]
 gi|288889531|gb|ADC57849.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella variicola At-22]
          Length = 282

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F++
Sbjct: 20  PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA  LP +      RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALAR-LPAVPC----RILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++    
Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274


>gi|291612729|ref|YP_003522886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sideroxydans lithotrophicus ES-1]
 gi|291582841|gb|ADE10499.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sideroxydans lithotrophicus ES-1]
          Length = 286

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +    L     +    ++  P+ VLD  Q+    N + R L+ E +  ILG R+F+ 
Sbjct: 26  ARIEVQCLLQNALKVPRSYLLAHPEQVLDATQQASYANLLQRRLQGEPVAHILGEREFFG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRPETELLV+ AL     RI      R+LD+GTG+GA+ L++    P  
Sbjct: 86  LNFKVTPATLIPRPETELLVELAL----QRIPAHGHFRVLDMGTGSGAIALSIAHARPEA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + V VD S  ALE+A+ NAV  G+      ++SDW+++++   + +IVSNPPYIE+    
Sbjct: 142 EVVAVDASGAALEVARENAVRLGIR-NATFIRSDWYAALDDKRYGLIVSNPPYIETGDAH 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L  G DG+   R I     R L       +E GY Q   V  +   
Sbjct: 201 LTQGDLR-FEPPSALASGADGMDDIRRIVGQAHRFLELGSWLLLEHGYEQAETVRLLLGQ 259

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V + KD  G +RV
Sbjct: 260 NGFANVFSVKDIAGIERV 277


>gi|296124206|ref|YP_003631984.1| modification methylase, HemK family [Planctomyces limnophilus DSM
           3776]
 gi|296016546|gb|ADG69785.1| modification methylase, HemK family [Planctomyces limnophilus DSM
           3776]
          Length = 307

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 131/271 (48%), Gaps = 9/271 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L         Q+    D  L +  R  + + + R  + E +  ++G R+F++
Sbjct: 35  PRLDAEVLLAHARQCHRIQLYTHYDEELTEEVRASMRDLVQRRARQEPVAYLVGEREFFS 94

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV------RILDLGTGTGAVCLALL 116
           +  ++++D   PRP++E L+  A++   P              RI+DL TG+G + + L 
Sbjct: 95  LSFSVNADVLIPRPDSETLIVEAISCLKPTPADDTASVASRSWRIVDLCTGSGCLAITLA 154

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPY 174
           ++ P  + +  D+S KAL +A+ N   + +++R +  Q      +E    FD+IVSNPPY
Sbjct: 155 RQLPTAQLIATDLSDKALAVARQNLARHSLADRVELRQGSLLEPLENEPPFDLIVSNPPY 214

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++ L  +VR  +PR++LDGG DG+   R +    ++HL   G   +E    Q   
Sbjct: 215 IPTADIESLEEDVRRHEPRLALDGGADGMDLLRPLIAEGAKHLLPGGWMLLEFTSEQAPA 274

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           ++   +++    LV   KD     RVL   +
Sbjct: 275 LMNYAQAQPDWSLVQVVKDLSQLPRVLKLQK 305


>gi|56460032|ref|YP_155313.1| hypothetical protein IL0924 [Idiomarina loihiensis L2TR]
 gi|56179042|gb|AAV81764.1| Protoporphyrinogen oxidase [Idiomarina loihiensis L2TR]
          Length = 281

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/261 (33%), Positives = 134/261 (51%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D  + LC V       ++  P+  L   Q+      I+   K + +  I G R+F+
Sbjct: 19  DAAADVSALLCFVLDKEKTYLMTWPEKPLTQEQQRHYEECILARQKGKPVAHITGRREFW 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +++ T  PRP+TE LV++AL+  LP     +  R+LDLGTGTGAV LAL  E P 
Sbjct: 79  SLMLEVNASTLIPRPDTETLVEAALSLELP-----ENARVLDLGTGTGAVALALKSERPG 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
           ++    D S  A+E+A+ N+   G+    + L S+WF SV     FD+I+SNPPYI++  
Sbjct: 134 WQVWACDKSGDAVELARRNSQALGL--NVEILCSNWFQSVPKSLKFDLILSNPPYIDAGD 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +VR F+P+ +L    +GL+   TI    + HL   G   +E G+ Q   V  + 
Sbjct: 192 PHLSMGDVR-FEPQTALIAENNGLADIETIIKEANNHLADQGWLLLEQGWQQADSVAELL 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  VN ++DY   DRV 
Sbjct: 251 FKSGYKKVNRWQDYARVDRVT 271


>gi|332800046|ref|YP_004461545.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Tepidanaerobacter sp. Re1]
 gi|332697781|gb|AEE92238.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Tepidanaerobacter sp. Re1]
          Length = 285

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 11/268 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               DS   L  V G    +++V  +  +  +Q     + +    +   I  I+G ++FY
Sbjct: 21  NPALDSELILGYVLGKDRLKLLVYDEMSITKQQLECFNDLLALRCQSTPIAYIIGRKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE LV+  L      I   +   I DL  G+GA+ +A+   +  
Sbjct: 81  GLDFYIKPGVLIPRPETEFLVEETLNV----IYSIENPLIADLCCGSGAISVAVAVNNNR 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            +    DIS  A E+A +N   +GV +R   +Q D +   E      FDV+VSNPPYI  
Sbjct: 137 VRVYASDISDVACEVASTNIKLHGVQDRVSLMQGDLWMPFEEKNIRGFDVVVSNPPYIPK 196

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  +V++ +P+I+L+GG  GL  YR I       L   G    EIG+NQ  DV  
Sbjct: 197 EELSTLPDDVKN-EPQIALNGGTGGLEFYRRIVLRAPEFLKIGGRIIFEIGWNQARDVEI 255

Query: 238 IFESRKLFLVNAFKDYGGNDRVL--LFC 263
           + +      +   KDY G DRV+  +FC
Sbjct: 256 MLKETGFQDIKIIKDYAGFDRVISGVFC 283


>gi|257452576|ref|ZP_05617875.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059116|ref|ZP_07923601.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684792|gb|EFS21627.1| methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 368

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  D+      V  ++ + + +     + + Q+  L   +++  K  + +  IL   +F
Sbjct: 105 NAKLDAEYIFADVLKVNRNMLSLYLHREISEEQKQELREKLIQRGKFRKPLQYILVKWEF 164

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y            PR +TE+LV+ A   SL    +++  +ILD+GTGTGA+ + L KE P
Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPKILDIGTGTGAIAITLAKEVP 220

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             + +G+DIS +AL +AK N            LQS+ F  +EG  FD+IVSNPPYI    
Sbjct: 221 EAEVLGIDISERALSLAKEN-KEYQFVRNVSFLQSNLFEKLEGKSFDIIVSNPPYIPQEE 279

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DG S Y+ I    + +LN+ G    E+GY Q   V +  
Sbjct: 280 YEDLMPEVKNYEPKNALTDAGDGYSFYQRIIQEANDYLNEKGYLLFEVGYQQAKQVKQWM 339

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E  K   +   +DY G+ RV+L  +
Sbjct: 340 EEEKFEDLYIAEDYAGHQRVVLGRK 364


>gi|330811718|ref|YP_004356180.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379826|gb|AEA71176.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 276

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++        +  + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSFLHTWPERIVPSEAALLFSEYLRRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++ALA     +      R+LDLGTG+GA+ LAL  E P +K   VD   +A+ 
Sbjct: 92  PDTELLVETALA-----LLPATPARVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +      L S WFS++E   F++I+SNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLDL-HNVTVLSSHWFSALEDTRFELIISNPPYIAASDPHLIEGDVR-FEPAS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HL+  G   +E GY+Q   V  +  ++    V++ KD G
Sbjct: 205 ALVAGPDGLDDLRQIVAQAPAHLDPGGWLMLEHGYDQAEAVRDLLRTQGFVEVHSRKDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L C
Sbjct: 265 GHERISLGC 273


>gi|257462415|ref|ZP_05626829.1| methyltransferase [Fusobacterium sp. D12]
 gi|317060079|ref|ZP_07924564.1| methyltransferase [Fusobacterium sp. D12]
 gi|313685755|gb|EFS22590.1| methyltransferase [Fusobacterium sp. D12]
          Length = 368

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  D+      V  ++ + + +     + ++++  L   +++  K  + +  ILG  +F
Sbjct: 105 NAKLDAEYIFAEVLQVNRNMLKLYLHREIAEKEKQNLREKLIQRGKFRKPLQYILGKWEF 164

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y            PR +TE+LV+ A   SL    +++   ILD+GTG+GA+ + L KE P
Sbjct: 165 YGYEFITDERALIPRADTEILVEQAKILSL----EKENPSILDIGTGSGAIAITLAKEVP 220

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + +G+D S KAL +AK N     +      LQSD F +++G  FD+IVSNPPYI    
Sbjct: 221 EAEVLGIDKSEKALSLAKEN-KEYQLVRNVSFLQSDLFEALQGQRFDIIVSNPPYISQEE 279

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV+ ++P+ +L    DG S Y+ I    + HL K G    E+GY Q   V    
Sbjct: 280 YEDLMPEVKKYEPKNALTDEGDGYSFYQKIIQQANSHLQKKGYLLFEVGYQQAQQVKEWM 339

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E      +   +DYGG+ RV+L  +
Sbjct: 340 EEENFEGIYIAEDYGGHQRVVLGRK 364



 Score = 38.5 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 19/45 (42%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
          +  +S   +  V  L    + V+ D +L + ++  +   + +  K
Sbjct: 22 SRLESEMLIADVLHLDRLSLYVNYDRMLQEEEKLEIKRYLYQMAK 66


>gi|325131308|gb|EGC54019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis M6190]
 gi|325137337|gb|EGC59925.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis ES14902]
          Length = 273

 Score =  276 bits (707), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   +  +  Q++      + D  R        R L  E +  +LGWR+FY 
Sbjct: 13  PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYLLGWREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  +LE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPSLETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|322832985|ref|YP_004213012.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rahnella sp. Y9602]
 gi|321168186|gb|ADW73885.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rahnella sp. Y9602]
          Length = 289

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   +++L   Q   L   + R  + E +  + G R+F++
Sbjct: 20  PKRDAEILLGFVTGRARTFIMAFGETLLTAGQLQQLEILLARREQGEPVAYLTGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ AL            V ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLSVSPATLIPRPDTECLVEQALIRL-----PSQPVSILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           K  GVD+   A+ +A+ NA    +      L   WFS V G  F +I SNPPYI++    
Sbjct: 135 KVTGVDLQPDAVRLAQHNAQKLNIL-NARFLPGSWFSPVAGERFALIASNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I      +L+K G   +E G+ Q  DV  +   
Sbjct: 194 LAKGDVR-FEPASALVAENAGLADLAHIIQAAPAYLHKGGWLLLEHGWQQATDVQALLRD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   KDYG NDRV L  
Sbjct: 253 AGYQHIATVKDYGDNDRVSLGQ 274


>gi|284007354|emb|CBA72731.1| protein methyltransferase (protein-glutamine N-methyltransferase)
           [Arsenophonus nasoniae]
          Length = 256

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 89/254 (35%), Positives = 142/254 (55%), Gaps = 7/254 (2%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +  +TG +   +I   ++ L  +Q+  L + +VR  + E I  ++  ++F+++ + +SS 
Sbjct: 1   MQYITGKTRTFLIAFGETELSVKQQQQLEHLLVRRARGEPIAYLVEEKEFWSLPIKVSSV 60

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PRP+TE LV+ AL      +  +  V+ILDLGTGTGAV LAL  E P  + VGVDIS
Sbjct: 61  TLIPRPDTECLVERAL----QLLSDKRAVKILDLGTGTGAVALALASECPQAQIVGVDIS 116

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             A+ +A+ NA  N +       +S+WF+S+    FD+IVSNPPYI+         +VR 
Sbjct: 117 DAAITLAQLNA-DNLLINNVKFCKSNWFTSLPIQQFDMIVSNPPYIDECDPHLQQGDVR- 174

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P+ +L     GL+  + I +  + +L  +G   +E G+ Q   V ++F       V  
Sbjct: 175 FEPKTALISANHGLADIQLIIEQSANYLANNGWLLLEHGWLQGRQVRQLFSCHHYQQVVT 234

Query: 250 FKDYGGNDRVLLFC 263
           F+DYGGNDR+ +  
Sbjct: 235 FQDYGGNDRITVGQ 248


>gi|325127342|gb|EGC50277.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis N1568]
          Length = 273

 Score =  276 bits (706), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+     
Sbjct: 130 TSDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVETLPDLAGLDRVTLG 266


>gi|331270452|ref|YP_004396944.1| methyltransferase [Clostridium botulinum BKT015925]
 gi|329127002|gb|AEB76947.1| Methyltransferase [Clostridium botulinum BKT015925]
          Length = 282

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + DS   + +V       +I++ D  +    +      I        +  ILG  +F  +
Sbjct: 23  MLDSQLLIQKVLKKDKLFIILNRDMEISSENQEEFFKLIKLRKDKMPVKYILGECEFMGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE+LV+  +      I +     I D+  G+GA+ +++ K     +
Sbjct: 83  NFNVKKGVLIPRADTEILVEEVIK----EIRENGYNNICDVCCGSGAIGISIAKYINKTR 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIV 180
               DIS  A+E+ KSN     ++++    +SD     +     +DVIVSNPPYI+  ++
Sbjct: 139 VDCYDISDIAIEVTKSNINKLELNDKVYVYKSDLLDEAKKQNKMYDVIVSNPPYIKEDVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V++++P I+L GG DGL  Y  I       LN+ GL + EIGY+Q  DV  I  
Sbjct: 199 PTLMKDVKEYEPYIALCGGKDGLYFYNKITKDSVVFLNRGGLLAFEIGYDQGKDVEEILI 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   KD  G DRV++  
Sbjct: 259 QNGFSNIRVIKDLAGLDRVVVGR 281


>gi|290508965|ref|ZP_06548336.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella sp. 1_1_55]
 gi|289778359|gb|EFD86356.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Klebsiella sp. 1_1_55]
          Length = 282

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   +   L   + R  + E I  ++G R+F++
Sbjct: 20  PRRDAEILLGHVTGRARTWILAFGETTLSADEATTLEALLQRRQRGEPIAHLVGQREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA             ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PAAPCHILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A  NA    ++      QSDWFS++ G  F +IVSNPPYI++    
Sbjct: 135 EVTAVDVMPDAVALALRNAAHLDIA-NVTIRQSDWFSALAGQRFAMIVSNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  +F  
Sbjct: 194 LAEGDVR-FEPLTALVAADQGLADLAQIIREGRQYLLPGGWMLLEHGWTQGEAVRALFRE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYG N+R+ L  
Sbjct: 253 AGYLDVATCRDYGDNERLTLGR 274


>gi|168334107|ref|ZP_02692320.1| modification methylase, HemK family protein [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 281

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 125/263 (47%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+   L  +       +I++ D ++++         I R   HE +  I  +++F 
Sbjct: 22  DATRDARLLLMHLLSCDRATLIINNDKLVEEEIVATYFKYIDRRKNHEPLQYITHYQEFM 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PR +TELLV+  +A     +        L++G G+G + ++LL     
Sbjct: 82  GLPFYVDQNVLIPRQDTELLVEKLIA-----LPWNHHPIGLEIGVGSGCISVSLLHYISN 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
              V  DIS  AL+IA  NA  N    R   + SD F ++    FD IVSNPPYI    +
Sbjct: 137 LTMVCSDISQAALDIAAKNASINACIPRIKFVHSDLFXNIPQQKFDFIVSNPPYIPKCEM 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV DF+P  +L    DGL+ YR IA    ++  + G+ + EIGYNQ  DV +I E
Sbjct: 197 NQLQPEVLDFEPAAALTDSGDGLAFYRAIATEAKKY--EIGILAFEIGYNQGPDVTKILE 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +  F DY    RV++  
Sbjct: 255 IEGYQNIQLFYDYNNKHRVIIAQ 277


>gi|261409697|ref|YP_003245938.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. Y412MC10]
 gi|261286160|gb|ACX68131.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. Y412MC10]
          Length = 296

 Score =  276 bits (706), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 130/265 (49%), Gaps = 5/265 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+  R++   L  V GLS     +       + +R  L  AI R  +      I+G ++F
Sbjct: 31  MEPQRNAQLLLEHVLGLSGTSYYMALTDPFPEGRRLALEEAITRKAEGVPAQYIIGEQEF 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKES 119
           Y     ++     PRPETELLV++ L +      + D  ++++D+GTG+GA+ + L  +S
Sbjct: 91  YGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPQPDGGLKVVDIGTGSGAIAITLALQS 150

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
             +     DIS  ALE+A  NA   G   + +  Q +      G+  D++VSNPPYI + 
Sbjct: 151 KGWDVFASDISPDALEVAARNAKKLGA--QVEFRQGNLLEPFAGMGPDILVSNPPYIPAE 208

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  EVRD++PR +LDGG DGL+ YR +   +        L + E+G  Q  DV  +
Sbjct: 209 DIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLPFLSAPPRLIAFELGMGQAGDVAEL 268

Query: 239 FESRKLF-LVNAFKDYGGNDRVLLF 262
                 +  +    D  G DR +L 
Sbjct: 269 LRKAGYWEEIVTVPDLAGIDRHVLG 293


>gi|91776826|ref|YP_546582.1| HemK family modification methylase [Methylobacillus flagellatus KT]
 gi|91710813|gb|ABE50741.1| [protein release factor]-glutamine N5-methyltransferase
           [Methylobacillus flagellatus KT]
          Length = 284

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A  +  + +    G +    +I   D  + D  R    + + R ++ E +  ILG R+F
Sbjct: 25  EARIEIRALMQHSLGDVDHAWLIAHGDEAVTDALRARFESLLARRIEGEPVAHILGRREF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++ DT  PR +TE LV++AL     RI       ILD+GTGTGA+ + L  E P
Sbjct: 85  YGRDFIVTPDTLIPRSDTETLVEAALD----RIPVGQTCEILDMGTGTGAIGITLALERP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             K   VD S  AL IA+ NA     +     L+SDWFS++ G  FD+IVSNPPYIE+  
Sbjct: 141 QAKVTIVDYSEAALAIARENARQLS-AHNVTALRSDWFSALGGRCFDLIVSNPPYIEAAD 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P  +L  G DGL   R ++   + HL  +G   +E GY Q   V  + 
Sbjct: 200 PHLQQGDLR-FEPIAALASGADGLDDIRILSAQAADHLITNGWLMLEHGYQQGAAVRSLL 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +      +    D  G++RV L  
Sbjct: 259 QQHGFANIGTATDLAGHERVTLGQ 282


>gi|224824643|ref|ZP_03697750.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lutiella nitroferrum 2002]
 gi|224603136|gb|EEG09312.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lutiella nitroferrum 2002]
          Length = 270

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 127/264 (48%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +S   L +VTG +  +++  P+  L   Q         R L  E I  +LG R+FY 
Sbjct: 13  PRLESRLLLMQVTGFTPAKLVGYPELELSPVQEAAFAALAERRLSGEPIAYLLGEREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PRPETE LV++ALA        R   +++DLG G+GA+ + L  E+P +
Sbjct: 73  RLFLVSPAVLIPRPETEHLVEAALARV-----GRSPAQVVDLGCGSGAIAVTLALEAPHW 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +   VD+S  AL IA+ NA            Q  W++ +    +FD+IVSNPPYI +   
Sbjct: 128 QVSAVDVSDAALAIARQNAARLMAP--VTFFQGSWYAPLPPAAVFDLIVSNPPYIAAADR 185

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+PR +L    DGLS  R IA G    L   G   VE GY+Q   V  +F 
Sbjct: 186 HLEQGDVR-FEPRRALTDEDDGLSCLREIAAGAPERLLPGGWLMVEHGYDQGDAVRALFH 244

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +  L  V    D  G DRV L  R
Sbjct: 245 AVGLAEVETLPDLAGLDRVTLGRR 268


>gi|170723616|ref|YP_001751304.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida W619]
 gi|169761619|gb|ACA74935.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas putida W619]
          Length = 276

 Score =  275 bits (705), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 81/249 (32%), Positives = 125/249 (50%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAQTYAGYLHRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     ++LDLGTGTGA+ LAL  E P ++   +D   +A+ 
Sbjct: 92  PDTELLVETALE-----LQPATPAKVLDLGTGTGAIALALASECPAWQVTALDRVEEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G+      L S WFS+++G  FD+I+SNPPYI +        +VR F+P  
Sbjct: 147 LAERNRQRLGLG-NVKVLASHWFSALDGERFDLILSNPPYIAAEDPHLAAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HL   G   +E GY+Q   V  +   +    V + KD G
Sbjct: 205 ALVAGADGLDDLRLIVGQAPAHLLPGGWLLLEHGYDQAPAVRALLTGQGFIEVASRKDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERISLGR 273


>gi|312897942|ref|ZP_07757355.1| protein-(glutamine-N5) methyltransferase [Megasphaera
           micronuciformis F0359]
 gi|310620976|gb|EFQ04523.1| protein-(glutamine-N5) methyltransferase [Megasphaera
           micronuciformis F0359]
          Length = 284

 Score =  275 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 86/263 (32%), Positives = 127/263 (48%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V       +    D  +   +       I +      +  ILG + F  
Sbjct: 26  PRLDAEILLAHVLEKERIYLYAHFDEPMTSTELSAYKEMIKKRAARYPVAHILGIKPFMG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETELLV++ L        K   VR+LD+GTG+GA+ L+LL   P  
Sbjct: 86  LDFIVNEHVLVPRPETELLVEAVLEIC----PKEVPVRVLDMGTGSGAILLSLLSYLPQA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
            G GVDIS  AL+IA  N+    + +R   + SD F++VE   +D +VSNPPY+ +  + 
Sbjct: 142 TGTGVDISSDALKIAAENSEALHI-DRAQWVNSDLFTNVEAHEYDWLVSNPPYLTAPDMQ 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+ +DP+ +L GG DGL  YR +A     +L   G C VE+G  Q   V  +F  
Sbjct: 201 NLEKEVK-YDPKTALYGGTDGLDIYRRLASEGGAYLKVGGHCIVEVGAGQARQVAELFTE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +   LV    DY   +R +L  +
Sbjct: 260 QDFELVRIINDYADTERHVLLRK 282


>gi|260888150|ref|ZP_05899413.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena
           ATCC 35185]
 gi|330840017|ref|YP_004414597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sputigena ATCC 35185]
 gi|260862179|gb|EEX76679.1| protein-(glutamine-N5) methyltransferase [Selenomonas sputigena
           ATCC 35185]
 gi|329747781|gb|AEC01138.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sputigena ATCC 35185]
          Length = 292

 Score =  275 bits (705), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 4/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G     + V  D  L+  +      A+    +      I G R+F  
Sbjct: 28  PRLDAEVLLSHVLGKERIYLYVHFDEPLEKEELAAFRKAVAERARRVPTAYITGRREFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLK-ESP 120
           +   +S  T  PRP+TE+LV++A+       E  R  +R  D+GTGTGA+ L++LK  S 
Sbjct: 88  LDFAVSRATLIPRPDTEILVEAAIERLGRLAENGRKPLRFADIGTGTGAIALSVLKYASE 147

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VDIS  AL IA+ NA   G+S      + D  + +    +D I+SNPPYI    
Sbjct: 148 DVAADAVDISGAALAIARENAERLGLSACVHFHEGDLLAPLSHAAYDAILSNPPYIPDAD 207

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EVR ++P  +L GG DG+  Y  +A+   ++L   G  +VE G  Q   +  + 
Sbjct: 208 FERLAPEVRSYEPMTALKGGADGMDFYARLAEAAPQYLRAGGFLAVEAGIGQAQKIRALA 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      V    D  G +RV++  R
Sbjct: 268 KE-PWGDVEILPDLAGIERVVVLWR 291


>gi|71909296|ref|YP_286883.1| modification methylase HemK [Dechloromonas aromatica RCB]
 gi|71848917|gb|AAZ48413.1| [protein release factor]-glutamine N5-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 270

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 8/257 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L   TG S   ++  P+  +         + + R    E +  ++G  +F   
Sbjct: 16  RLDARLLLQYATGCSHADLLARPEMPVIGPAYEQFQDWVARRAAGEPLAYLVGEAEFRGR 75

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +S     PRPETE+L++ ALA    ++      +++DLGTG+G V ++L  ESP   
Sbjct: 76  VFQVSPAVLIPRPETEVLIELALA----KLPGLAAPKVVDLGTGSGIVAISLALESPAAT 131

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            V VD+S +A+ +A++NA   G   R D  Q DWFS + G  FD+IVSNPPY+       
Sbjct: 132 VVAVDLSAEAISVARNNAGRLGA--RIDFRQGDWFSPLAGERFDLIVSNPPYVADGDPH- 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L L    F+P+++L  G DGLS  R I    + HL   G    E GY+Q      +  + 
Sbjct: 189 LALNGLPFEPQMALTDGADGLSCIRHIVADAADHLAPGGWLLFEHGYDQGEASRNLLTAA 248

Query: 243 KLFLVNAFKDYGGNDRV 259
                  F D  G DRV
Sbjct: 249 GFKAAFTFPDLAGIDRV 265


>gi|220920162|ref|YP_002495463.1| modification methylase, HemK family [Methylobacterium nodulans ORS
           2060]
 gi|219944768|gb|ACL55160.1| modification methylase, HemK family [Methylobacterium nodulans ORS
           2060]
          Length = 299

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/262 (40%), Positives = 154/262 (58%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+RD+   L     L S  +++  D  L+ R+   L+ A++R  + E + RILG  +F+ 
Sbjct: 30  AMRDARLLLIETLNLRSIDLVLAGDRELEAREAARLSAALLRRAEGEPVARILGAWEFWG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS  T  PRP+TE +V++ALA  L R      +R+LDLGTG+G + +ALL E P  
Sbjct: 90  LPFRLSPATLVPRPDTETVVEAALALGLERT---APIRLLDLGTGSGCLLVALLSEWPCA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D + +AL  A+ NA  NGV  R   +Q DW  S+ G FDVIV+NPPYI S ++D 
Sbjct: 147 TGLGIDRAREALVTARDNADQNGVGARALWVQGDWAGSLRGPFDVIVANPPYIASRMIDG 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR  DPR++LDGG DGL  YR I    +  L   G   VEIGY+Q+  +  + E+ 
Sbjct: 207 LADEVRVHDPRMALDGGSDGLDAYRVILGQAAVLLAPGGRLIVEIGYDQEEALRHLAEAA 266

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
           +L +V   +D  G+ R ++  R
Sbjct: 267 RLQVVVVRRDLAGHPRAVVMAR 288


>gi|39933684|ref|NP_945960.1| modification methylase HemK family [Rhodopseudomonas palustris
           CGA009]
 gi|39647530|emb|CAE26051.1| putative protoporphyrinogen oxidase, hemK protein [Rhodopseudomonas
           palustris CGA009]
          Length = 289

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 103/262 (39%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  V GL    +++  + +L   +   L +   R L  E + RILG R+F+ 
Sbjct: 26  AALDARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSLAARRLGGEPVARILGMREFWG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS+DT  PRP+TE +V++ALA    R       RILD+GTGTGA+ LALL E P  
Sbjct: 86  LPFELSADTLVPRPDTETIVEAALAILAERSSLAP--RILDIGTGTGAILLALLHECPDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A+ NA   G+++R   +  D+ S++ G FD+IVSNPPYI    +  
Sbjct: 144 VGVATDISLGALRTARGNAQRLGLADRACFVACDYASALCGPFDLIVSNPPYIPGNEIAA 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR +LDGG DGL  YR I     R L   G+  VEIG  Q+ DV  + ++ 
Sbjct: 204 LDREVRDHDPRRALDGGDDGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQAS 263

Query: 243 KLFLVN-AFKDYGGNDRVLLFC 263
            L + +    D  G  R +   
Sbjct: 264 GLTVSDPFRPDLSGIFRAVTGR 285


>gi|291617196|ref|YP_003519938.1| HemK [Pantoea ananatis LMG 20103]
 gi|291152226|gb|ADD76810.1| HemK [Pantoea ananatis LMG 20103]
          Length = 344

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 8/256 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   +++L + Q   L   + R  + E +  ++G R+F++
Sbjct: 21  PKRDAEILLGFVTGKSRSWLVAFDETLLTEAQLQQLDVLLARRARGEPVAHLIGEREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TE+LV+ ALA            R+LD+GTG+GA+ LA+  E P  
Sbjct: 81  LPLQVNDATLIPRPDTEILVEQALAHL-----PESPARVLDMGTGSGAIALAIASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             +GVD    A+ +A+ NA    +      +QS WF+ +     D+IVSNPPYI++    
Sbjct: 136 DVIGVDRIPAAVALAQRNAAHLAIP-NATFIQSHWFAQITPARLDLIVSNPPYIDANDRH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  R + +     L   G   +E G+ Q   V  + + 
Sbjct: 195 LNEGDVR-FEPRSALVAEEAGLADLRLLIEQAINWLQPGGWLLLEHGWQQDEAVRHLMQQ 253

Query: 242 RKLFLVNAFKDYGGND 257
                V    DYGGN 
Sbjct: 254 HHYLSVATANDYGGNP 269


>gi|82700641|ref|YP_415215.1| N-6 adenine-specific DNA methylase [Brucella melitensis biovar
           Abortus 2308]
 gi|148560045|ref|YP_001259696.1| protein-(glutamine-N5) methyltransferase [Brucella ovis ATCC 25840]
 gi|256370268|ref|YP_003107779.1| hemK protein [Brucella microti CCM 4915]
 gi|82616742|emb|CAJ11827.1| SAM (and some other nucleotide) binding motif:N-6 Adenine-specific
           DNA methylase:N6 adenine-specific DNA methyltransferase,
           N [Brucella melitensis biovar Abortus 2308]
 gi|148371302|gb|ABQ61281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella ovis ATCC 25840]
 gi|256000431|gb|ACU48830.1| hemK protein [Brucella microti CCM 4915]
          Length = 283

 Score =  275 bits (704), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 18  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 77

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 78  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 138 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 198 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 257

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 258 SLAGEANDLGGHRRAMLF 275


>gi|225575053|ref|ZP_03783663.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037723|gb|EEG47969.1| hypothetical protein RUMHYD_03142 [Blautia hydrogenotrophica DSM
           10507]
          Length = 283

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +  V  +      +  +S     Q       I        +  +     F  + 
Sbjct: 25  LDAWYLMEYVFEMDRAHYFLR-ESEEAGSQEEEYRRLISLRCGRIPLQHLTHQAWFMGLE 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR +TE+LV+ A+          D  R+LD+ TG+G + L++L + P  KG
Sbjct: 84  FYVDGRVLVPRQDTEILVEEAVRRL------EDGQRLLDMCTGSGCILLSILSQKPCCKG 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            GVD+S  ALE+A+ N     ++   D  QSD F+ + G +++IVSNPPYI + ++  L 
Sbjct: 138 TGVDLSADALEVARLNGRRLNITA--DFRQSDLFTDIGGRYEMIVSNPPYIPTGVIPTLE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR +DP ++LDGG DGLS YR I +  S  L   G    EIG++Q   V  + E+   
Sbjct: 196 EEVRSYDPNLALDGGEDGLSFYRRIVEQASTRLEDGGWLLFEIGHDQGRCVRDMMENAGY 255

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +   KD  G DRV+L  R
Sbjct: 256 GELQVVKDLAGRDRVVLGRR 275


>gi|299139886|ref|ZP_07033058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX8]
 gi|298598240|gb|EFI54406.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidobacterium sp. MP5ACTX8]
          Length = 280

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 9/267 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            RD+ + L  V G     ++  P+  LD  Q         R    E +  + G ++FY +
Sbjct: 16  RRDAETLLAHVLGHPRAWLLAHPEEELDAAQAETFLGLAARRAAGEPLQYLTGVQEFYGL 75

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ +   PRPETE LV++ + ++    + R ++RI D+GTG+GA+ +AL        
Sbjct: 76  SLRVTPEVLIPRPETEHLVEAVILWATQFHDGR-ILRIADVGTGSGAIAIALATHLAGVA 134

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIES 177
            V +D S  AL +A+ NA   G  ER   L++D    +         FD IVSNPPYI  
Sbjct: 135 LVAIDQSEGALAVAEENAHALGCRERITFLRNDLLKDLSSALPHYPPFDAIVSNPPYIPL 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                + +EV   +P  +L  G DGL+ Y+ +       L+  GL ++EIG+ Q+  +  
Sbjct: 195 GDAATMQVEVVQHEPHSALFAGDDGLAIYQRLIPQAHAALHPCGLLAMEIGFGQRPALEE 254

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +        V    DY G  R++L  R
Sbjct: 255 LLVD--WSNVRFVDDYAGIPRIVLAER 279


>gi|237745911|ref|ZP_04576391.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
 gi|229377262|gb|EEO27353.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes HOxBLS]
          Length = 287

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 94/257 (36%), Positives = 134/257 (52%), Gaps = 14/257 (5%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    G S  ++I   D VL D +   +++ + R L+ E +  I G R+FY +   +
Sbjct: 33  RILLEHALGFSRVKLITHSDHVLTDAEANAVSDVLARRLRGEPVAYITGIREFYGLPFAV 92

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PRPETELLVD ALA         +  R++DLGTG+GA+ +A+    P  +    
Sbjct: 93  TPDVLIPRPETELLVDLALARL------PEGGRVVDLGTGSGAIAVAIAAMRPDAQVWAT 146

Query: 128 DISCKALEIAKSNAV---TNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
           DIS KAL+IA+ NA     NG S RF   Q +W+ ++E    FD+IVSNPPYI S     
Sbjct: 147 DISGKALDIARKNAASCLKNGQSVRFR--QGNWYEALEPGSRFDLIVSNPPYIHSADEHL 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P  +L    DGLS    + D    +L K G   +E GYNQ   V +    +
Sbjct: 205 RKGDLR-FEPLSALTDYTDGLSAMDILIDQAPAYLKKGGELLMEHGYNQSGAVRKKLVDK 263

Query: 243 KLFLVNAFKDYGGNDRV 259
           K   V ++KD  G +RV
Sbjct: 264 KYLQVQSWKDLAGIERV 280


>gi|148657628|ref|YP_001277833.1| HemK family modification methylase [Roseiflexus sp. RS-1]
 gi|148569738|gb|ABQ91883.1| modification methylase, HemK family [Roseiflexus sp. RS-1]
          Length = 285

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G S  +V+   +    D         I+R    E +  ++G ++FY 
Sbjct: 28  PRLDAEVLLAHTLGWSRARVLSRLEEPFTDESLHQFRTLILRRAAREPVAYLVGRKEFYG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRPETE LVD+AL ++  R      + I D+GTG+G + +AL    P  
Sbjct: 88  LEFVVDRRVLVPRPETETLVDAALEWAKHR---PAPLVIADIGTGSGCIAVALAVHLPQA 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +D+S  AL +A+ N + + V      L  D  + +    D++VSNPPY    +++ 
Sbjct: 145 HIYAIDLSRDALAVARQNVIRHHVDASVTLLNGDLLAPLPQPVDLLVSNPPY---TVLNE 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   VR  +P ++LDGG DGL+ YR +       L   G   +EIG  Q   VV +    
Sbjct: 202 VDPGVRMHEPHLALDGGSDGLAVYRRLFAAAPSALRPGGALMLEIGATQARAVVDLARQA 261

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
               ++   +D  G DRV++
Sbjct: 262 FPEAVIRVRQDLAGRDRVVI 281


>gi|329121080|ref|ZP_08249711.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus
           DSM 19965]
 gi|327471242|gb|EGF16696.1| protein-(glutamine-N5) methyltransferase [Dialister micraerophilus
           DSM 19965]
          Length = 288

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   +   +  D + +++  +       I   +   S+  ++G +DF  
Sbjct: 28  PRLDAELLLSYVLKKTRIYLYTDFEQIVNKNELKEFKKLIQNRINGFSVATLIGEKDFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++     PRP+TE  V+  +      IE    + + D+G G+GA+  + LK     
Sbjct: 88  FKFFVNDKVLIPRPDTETWVEKVIQIHKNDIE----LFVADIGCGSGAIICSFLKYCKNA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           KGVG+DIS  A+EI+K N     +  R +  + D+F++++    FD I SNPPYI +  +
Sbjct: 144 KGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFDGIFSNPPYIPTDDI 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV++ +P I+LDGG DGL+ YR IA+   + LN  G  +VE+G +Q + V  +FE
Sbjct: 204 EFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVEVGIHQSLIVKEMFE 262

Query: 241 SRKLF-LVNAFKDYGGNDRVLLFCR 264
           S   F      KDYG  +R +   R
Sbjct: 263 STGYFTDFEIIKDYGNIERAVYCIR 287


>gi|192289041|ref|YP_001989646.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris TIE-1]
 gi|192282790|gb|ACE99170.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris TIE-1]
          Length = 289

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 102/259 (39%), Positives = 143/259 (55%), Gaps = 3/259 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  V GL    +++  + +L   +   L +   R L+ E + RILG R+F+ 
Sbjct: 26  AALDARLLVGEVAGLDLTGLLIQAERILTAEENEQLQSFAARRLRGEPVARILGMREFWG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS+DT  PRP+TE +V++ALA    R       RILD+GTG+GA+ LALL E P  
Sbjct: 86  LPFELSADTLVPRPDTETIVEAALAILAERSSLAP--RILDIGTGSGAILLALLHECPDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A+ NA   G+++R   +  D+ S++ G FD+IVSNPPYI    +  
Sbjct: 144 VGVATDISLGALRTARGNAQRLGLADRACFVACDYASALRGPFDLIVSNPPYIPGNEIAA 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR +LDGG DGL  YR I     R L   G+  VEIG  Q+ DV  + ++ 
Sbjct: 204 LDREVRDHDPRRALDGGADGLDAYRKIIPESVRLLQPGGVLVVEIGQGQEGDVSALMQAS 263

Query: 243 KLFLVN-AFKDYGGNDRVL 260
            L + +    D  G  R +
Sbjct: 264 GLTVSDPFRPDLSGIFRAV 282


>gi|254302819|ref|ZP_04970177.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323011|gb|EDK88261.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 383

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60
            +L D+      V  +S + +       + +  +  +    ++R+ K + +  ILG  +F
Sbjct: 103 NSLLDAEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEF 162

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   +S     PR +TE+LV+  +       E      ILD+GTG+GA+ +A+  E  
Sbjct: 163 YGLPFKVSEGVLIPRADTEILVEQCIQLMRDIEEPN----ILDIGTGSGAISIAIANELK 218

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                G+DI+ KAL++A  N + N + E  + ++S+ F  ++    +D+IVSNPPYI   
Sbjct: 219 SSSVTGIDINEKALKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKE 277

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +I
Sbjct: 278 EYEILMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVSKI 337

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     +++  KDYGGNDRV++  +
Sbjct: 338 LQDNNFAILSIVKDYGGNDRVIIAKK 363



 Score = 39.7 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 3/42 (7%), Positives = 15/42 (35%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR 44
             ++   +  V  L    + +  +  L + ++  +   + +
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKK 63


>gi|15604677|ref|NP_221195.1| bifunctional N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase/tRNA (m7G46) methyltransferase
           [Rickettsia prowazekii str. Madrid E]
 gi|6225501|sp|Q9ZCB3|HEMK_RICPR RecName: Full=Bifunctional methyltransferase; Includes: RecName:
           Full=HemK protein homolog; AltName: Full=M.RprHemKP;
           Includes: RecName: Full=tRNA
           (guanine-N(7)-)-methyltransferase; AltName:
           Full=tRNA(m7G46)-methyltransferase
 gi|3861372|emb|CAA15271.1| POSSIBLE PROTOPORPHYRINOGEN OXIDASE (hemK) [Rickettsia prowazekii]
 gi|292572508|gb|ADE30423.1| Methylase of polypeptide chain release factors [Rickettsia
           prowazekii Rp22]
          Length = 518

 Score =  275 bits (704), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 15/271 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  VT      +++  +  L + +       + R L HE I  I+G ++FY+  
Sbjct: 26  LEARILLQHVTNKPIEHLLIKLNEQLSEAEIEAFEKLLERRLAHEPIAYIIGVKEFYSRE 85

Query: 65  LTLSSDTFEPRPETELLVDSALA--------------FSLPRIEKRDVVRILDLGTGTGA 110
             ++     PR +TE+LVD  +                SL  +       IL+LGTG+G 
Sbjct: 86  FIVNKHVLIPRIDTEVLVDVVIGLVVSRNNLHMFSKLKSLDSVLTTQSYNILELGTGSGC 145

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + ++LL E P    +  DIS  A+++AKSN++   V++R   + S+WF  ++   FD IV
Sbjct: 146 IAISLLCELPNTNIIATDISVDAIKVAKSNSIKYNVTDRIQIIHSNWFEKLDKQKFDFIV 205

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI       + +E  +++P I+L    DGL  Y  IA    + L  +G   +EIG+
Sbjct: 206 SNPPYISHTEKLKMAIETINYEPSIALFAEEDGLEAYSIIAKNAKQFLKPNGKIILEIGF 265

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +Q   V +IF +    +   ++D   ++RV+
Sbjct: 266 SQAAKVSKIFLNYGYNIDYIYRDLQSHNRVI 296


>gi|300853433|ref|YP_003778417.1| putative modification methylase [Clostridium ljungdahlii DSM 13528]
 gi|300433548|gb|ADK13315.1| predicted modification methylase [Clostridium ljungdahlii DSM
           13528]
          Length = 287

 Score =  275 bits (703), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 117/260 (45%), Gaps = 7/260 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L +V       ++++ D  + +++       +        +  ILG  +F  +
Sbjct: 28  ALDAQLLLGKVLNKDRLFMLINGDYKVPEKETEEYYKYLKLREDKMPVKYILGHCEFMGI 87

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRP+TE LV+ AL     +I+  +   I D+  GTG + +++ K      
Sbjct: 88  DFIVKPGVLIPRPDTETLVEQALI----QIKHNNFHNICDVCCGTGIIGISIAKLIEGMN 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180
               DIS  A E+   N     + E+   ++S+        E  F +IVSNPPYI+   +
Sbjct: 144 VKCCDISSTACEVTAENIRRFSLEEKVQVVKSNLMEYYIQNEVKFHMIVSNPPYIKESSI 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V++++PR +L GG DGL  YR I     R L  +G+   EIGY+Q+  V  I  
Sbjct: 204 PTLMEDVKNYEPREALSGGKDGLEFYRKITKESLRVLESNGIIMFEIGYDQRESVSDILA 263

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   KD  G DRV+
Sbjct: 264 QNGFKNIMCIKDLAGKDRVI 283


>gi|194364468|ref|YP_002027078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas maltophilia R551-3]
 gi|194347272|gb|ACF50395.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas maltophilia R551-3]
          Length = 285

 Score =  275 bits (703), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 129/266 (48%), Gaps = 7/266 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++A  ++   L  V       +       LD   +      + R +  E +  + G R F
Sbjct: 23  VEARHEAELLLLHVLDCPRSWLFAHATDPLDANDQAAFEALLARRVAGEPVAYLTGRRGF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L +   T  PRPETELLV+ AL     R+ +   +++ DLGTG+GA+ LAL  E P
Sbjct: 83  WTLDLEVDPATLIPRPETELLVELALE----RLPQDRALQLADLGTGSGAIALALASERP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             + +  D S  AL +A  NA  + + + RF     DW++ ++G  FD+I SNPPYI S 
Sbjct: 139 QAQVLATDASPGALTVAARNAARHELGNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L  G+DGL   R I DG   HL   G   +E G++Q   +  +
Sbjct: 199 DPHLEQGDLR-FEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGAAIRAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F++     V   +D    DR+ L  R
Sbjct: 258 FDAAGFAEVQTVQDLEQRDRITLGRR 283


>gi|163843894|ref|YP_001628298.1| HemK family methyltransferase [Brucella suis ATCC 23445]
 gi|189024939|ref|YP_001935707.1| methyltransferase [Brucella abortus S19]
 gi|225628072|ref|ZP_03786107.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo]
 gi|225853307|ref|YP_002733540.1| methyltransferase, HemK family protein [Brucella melitensis ATCC
           23457]
 gi|237816234|ref|ZP_04595227.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus str. 2308 A]
 gi|254690016|ref|ZP_05153270.1| methyltransferase, HemK family protein [Brucella abortus bv. 6 str.
           870]
 gi|254694506|ref|ZP_05156334.1| methyltransferase, HemK family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254696131|ref|ZP_05157959.1| methyltransferase, HemK family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254700515|ref|ZP_05162343.1| methyltransferase, HemK family protein [Brucella suis bv. 5 str.
           513]
 gi|254707599|ref|ZP_05169427.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254708864|ref|ZP_05170675.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           B2/94]
 gi|254713713|ref|ZP_05175524.1| methyltransferase, HemK family protein [Brucella ceti M644/93/1]
 gi|254715937|ref|ZP_05177748.1| methyltransferase, HemK family protein [Brucella ceti M13/05/1]
 gi|254717938|ref|ZP_05179749.1| methyltransferase, HemK family protein [Brucella sp. 83/13]
 gi|254731049|ref|ZP_05189627.1| methyltransferase, HemK family protein [Brucella abortus bv. 4 str.
           292]
 gi|256030390|ref|ZP_05444004.1| methyltransferase, HemK family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256045466|ref|ZP_05448353.1| methyltransferase, HemK family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256158373|ref|ZP_05456271.1| methyltransferase, HemK family protein [Brucella ceti M490/95/1]
 gi|256253792|ref|ZP_05459328.1| methyltransferase, HemK family protein [Brucella ceti B1/94]
 gi|256258271|ref|ZP_05463807.1| methyltransferase, HemK family protein [Brucella abortus bv. 9 str.
           C68]
 gi|256263205|ref|ZP_05465737.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9]
 gi|260169299|ref|ZP_05756110.1| methyltransferase, HemK family protein [Brucella sp. F5/99]
 gi|260545991|ref|ZP_05821731.1| methyltransferase [Brucella abortus NCTC 8038]
 gi|260755552|ref|ZP_05867900.1| modification methylase [Brucella abortus bv. 6 str. 870]
 gi|260758775|ref|ZP_05871123.1| modification methylase [Brucella abortus bv. 4 str. 292]
 gi|260760499|ref|ZP_05872842.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884576|ref|ZP_05896190.1| modification methylase [Brucella abortus bv. 9 str. C68]
 gi|261214823|ref|ZP_05929104.1| modification methylase [Brucella abortus bv. 3 str. Tulya]
 gi|261217700|ref|ZP_05931981.1| modification methylase [Brucella ceti M13/05/1]
 gi|261315086|ref|ZP_05954283.1| modification methylase [Brucella pinnipedialis M163/99/10]
 gi|261316357|ref|ZP_05955554.1| modification methylase [Brucella pinnipedialis B2/94]
 gi|261321453|ref|ZP_05960650.1| modification methylase [Brucella ceti M644/93/1]
 gi|261751019|ref|ZP_05994728.1| modification methylase [Brucella suis bv. 5 str. 513]
 gi|261758812|ref|ZP_06002521.1| methyltransferase [Brucella sp. F5/99]
 gi|265982881|ref|ZP_06095616.1| modification methylase [Brucella sp. 83/13]
 gi|265987429|ref|ZP_06099986.1| modification methylase [Brucella pinnipedialis M292/94/1]
 gi|265991892|ref|ZP_06104449.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265996885|ref|ZP_06109442.1| modification methylase [Brucella ceti M490/95/1]
 gi|294851111|ref|ZP_06791784.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297247115|ref|ZP_06930833.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus bv. 5 str. B3196]
 gi|306838262|ref|ZP_07471112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella sp. NF 2653]
 gi|163674617|gb|ABY38728.1| methyltransferase, HemK family [Brucella suis ATCC 23445]
 gi|189020511|gb|ACD73233.1| Methyltransferase [Brucella abortus S19]
 gi|225616897|gb|EEH13944.1| methyltransferase, HemK family protein [Brucella ceti str. Cudo]
 gi|225641672|gb|ACO01586.1| methyltransferase, HemK family protein [Brucella melitensis ATCC
           23457]
 gi|237788301|gb|EEP62516.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus str. 2308 A]
 gi|260096098|gb|EEW79974.1| methyltransferase [Brucella abortus NCTC 8038]
 gi|260669093|gb|EEX56033.1| modification methylase [Brucella abortus bv. 4 str. 292]
 gi|260670931|gb|EEX57752.1| modification methylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675660|gb|EEX62481.1| modification methylase [Brucella abortus bv. 6 str. 870]
 gi|260874104|gb|EEX81173.1| modification methylase [Brucella abortus bv. 9 str. C68]
 gi|260916430|gb|EEX83291.1| modification methylase [Brucella abortus bv. 3 str. Tulya]
 gi|260922789|gb|EEX89357.1| modification methylase [Brucella ceti M13/05/1]
 gi|261294143|gb|EEX97639.1| modification methylase [Brucella ceti M644/93/1]
 gi|261295580|gb|EEX99076.1| modification methylase [Brucella pinnipedialis B2/94]
 gi|261304112|gb|EEY07609.1| modification methylase [Brucella pinnipedialis M163/99/10]
 gi|261738796|gb|EEY26792.1| methyltransferase [Brucella sp. F5/99]
 gi|261740772|gb|EEY28698.1| modification methylase [Brucella suis bv. 5 str. 513]
 gi|262551353|gb|EEZ07343.1| modification methylase [Brucella ceti M490/95/1]
 gi|263002900|gb|EEZ15251.1| modification methylase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093127|gb|EEZ17262.1| methyltransferase [Brucella melitensis bv. 2 str. 63/9]
 gi|264659626|gb|EEZ29887.1| modification methylase [Brucella pinnipedialis M292/94/1]
 gi|264661473|gb|EEZ31734.1| modification methylase [Brucella sp. 83/13]
 gi|294819700|gb|EFG36699.1| protein-(glutamine-N5) methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|297174284|gb|EFH33631.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella abortus bv. 5 str. B3196]
 gi|306406665|gb|EFM62894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brucella sp. NF 2653]
 gi|326409871|gb|ADZ66936.1| Methyltransferase [Brucella melitensis M28]
 gi|326539584|gb|ADZ87799.1| methyltransferase, HemK family protein [Brucella melitensis M5-90]
          Length = 295

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|313891849|ref|ZP_07825454.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dialister microaerophilus UPII 345-E]
 gi|313119843|gb|EFR43030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dialister microaerophilus UPII 345-E]
          Length = 288

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   +   +  D + +++  +       I   +   S+  ++G +DF  
Sbjct: 28  PRLDAELLLSYVLKKTRIYLYTDFEQIVNKDELKEFKKLIQNRINGFSVATLIGEKDFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++     PRP+TE  V+  +      IE    + + D+G G+GA+  + LK     
Sbjct: 88  FKFFVNDKVLIPRPDTETWVEKVIQIHKNDIE----LFVADIGCGSGAIICSFLKYCKNA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           KGVG+DIS  A+EI+K N     +  R +  + D+F++++    FD I SNPPYI +  +
Sbjct: 144 KGVGIDISDDAIEISKKNIKNLSLENRIELRKGDFFNALKKGEKFDGIFSNPPYIPTDDI 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV++ +P I+LDGG DGL+ YR IA+   + LN  G  +VE+G +Q + V  +FE
Sbjct: 204 KFLQKEVKN-EPLIALDGGKDGLNFYRKIAENAEKFLNSGGFLAVEVGIHQSLIVKEMFE 262

Query: 241 SRKLF-LVNAFKDYGGNDRVLLFCR 264
           S   F      KDYG  +R +   R
Sbjct: 263 STGYFTDFEIIKDYGNIERAVYCIR 287


>gi|226952753|ref|ZP_03823217.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|226836502|gb|EEH68885.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
          Length = 270

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 132/262 (50%), Gaps = 10/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            +++   L  + G++S ++ +  +  L + Q     + + R  + E +  + G + F+ +
Sbjct: 18  RQEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTL 77

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ DT  PRP+TE+LV++ L  SL          I+DLGTGTGA+ LAL  E P + 
Sbjct: 78  DLKVTHDTLVPRPDTEILVETVLKLSLD-----PQANIVDLGTGTGAIALALASERPQWS 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
               DI    LE+A+ NA+ +G+S +       WF ++E   FD+IVSNPPYI+   V  
Sbjct: 133 VTATDIYQPTLEVAQENALKHGLS-QVKFACGAWFEALEQQQFDLIVSNPPYIDPDDVHM 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P  +L     GL+   TI       L  +G  ++E GY+Q   V  IFE  
Sbjct: 192 QK---LKSEPERALIAANHGLADIETIIAQGKDWLKAEGWIALEHGYDQGQVVREIFEQH 248

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +   KDYGGNDRV L  +
Sbjct: 249 GFNQIQTIKDYGGNDRVSLAQK 270


>gi|110635327|ref|YP_675535.1| HemK family modification methylase [Mesorhizobium sp. BNC1]
 gi|110286311|gb|ABG64370.1| [protein release factor]-glutamine N5-methyltransferase
           [Chelativorans sp. BNC1]
          Length = 288

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 115/262 (43%), Positives = 155/262 (59%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   +   +  +  Q I  P+  ++      +  A+ R +  E +HRILG RDFY
Sbjct: 24  DAALEARLIVEHFSETTQTQAITHPECAVEAAVAEKVARAVERRIAGEPVHRILGHRDFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L LS +T EPRP+TE LVD  L  +      +   RILDLGTGTGA+ LALL   P 
Sbjct: 84  GLKLALSPETLEPRPDTETLVDLVLPEARRIANVKKHCRILDLGTGTGAIALALLSVVPE 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VG DIS  ALE A+ NA  + V+ERF  L+SDWF +V+G FD+IVSNPPYI +  ++
Sbjct: 144 AEAVGTDISEGALETARHNADMSFVAERFTPLRSDWFRNVDGRFDLIVSNPPYIATAEME 203

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+ DP+ +LDGG DGL  YR IA G   HL ++GL +VE G  QK  V  IF +
Sbjct: 204 TLPREVREHDPKAALDGGPDGLMPYRAIASGARDHLTREGLIAVETGAEQKAAVAAIFAA 263

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
               +    +D GG DR +LF 
Sbjct: 264 EGYAVSRTARDLGGRDRAMLFA 285


>gi|294782569|ref|ZP_06747895.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
 gi|294481210|gb|EFG28985.1| methyltransferase [Fusobacterium sp. 1_1_41FAA]
          Length = 382

 Score =  275 bits (703), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 83/265 (31%), Positives = 137/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
           AL D+         +S + +       + +  +  +   ++   K  + +  ILG  +FY
Sbjct: 104 ALVDTEYIFSEALKVSRNTLKYSMSREIKEEDKNKIREMLMLRAKNRKPLQYILGEWEFY 163

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRP+TE+LV+  +      + + +   ILD+G+G+GA+ +A+  E   
Sbjct: 164 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 219

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               GVDI+  A+E+A  N V N V E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 220 SSVTGVDINEDAIELANENKVLNKV-ENVNFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 278

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++F+P+ +L    DGL  YR I+     +L   G  + EIGY Q  DV +I 
Sbjct: 279 YESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKDTGYLAFEIGYKQAKDVSKIL 338

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E     +++  KDYGGNDRV+L  +
Sbjct: 339 EDNNFAILSVVKDYGGNDRVVLAKK 363



 Score = 39.7 bits (92), Expect = 0.41,   Method: Composition-based stats.
 Identities = 4/47 (8%), Positives = 18/47 (38%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49
             +S   +  V  L    + +  +  L + ++  +   + + ++ +
Sbjct: 22 PRLESEKLVSYVLNLDRIALYIHHERELTEEEKTSIKQFLKQMVEEK 68


>gi|91792281|ref|YP_561932.1| HemK family modification methylase [Shewanella denitrificans OS217]
 gi|91714283|gb|ABE54209.1| modification methylase, HemK family [Shewanella denitrificans
           OS217]
          Length = 284

 Score =  274 bits (702), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 133/261 (50%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L          +   P+  L  +Q     N +++  +   +  I+G R+F++
Sbjct: 27  AHVDAEVLLLHCLNKPKSFIYTWPEKALSVQQFRAFNNMVLKRQQGVPVAHIIGEREFWS 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL  +L         ++LDLGTGTGA+ L+L  E P +
Sbjct: 87  LPFIVNESTLIPRPDTEILVETALNLTLS-----PHAKVLDLGTGTGAIALSLASERPDW 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           K   +D   +A+E+AK+N     +  + + LQSDWFS+V+   FD+IVSNPPYI++    
Sbjct: 142 KVTAIDKVDEAVELAKANRQNLNLP-QVEILQSDWFSAVKDRDFDLIVSNPPYIDAEDEH 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G  G +    IA+    HL   G   +E G+ Q + V      
Sbjct: 201 LNLGDVR-FEPQSALTAGEHGYADLFHIAEHAREHLVHGGYLLLEHGFEQAIKVREKLIE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  L 
Sbjct: 260 LGYQQVATVRDFGSNDRCTLG 280


>gi|154707092|ref|YP_001425369.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii Dugway 5J108-111]
 gi|154356378|gb|ABS77840.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii Dugway 5J108-111]
          Length = 277

 Score =  274 bits (702), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   S   +   P+  L+  Q+  L+  + R LK E I  ILG ++F++
Sbjct: 22  PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRLKGEPIAYILGQKEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRPETE+LV   L      + K + +RI DLGTG+GAV LA+  E P +
Sbjct: 82  LNLKVTPDVLIPRPETEMLVGWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D S  AL+IA+ NA  + +    +    +W  ++    +  IV NPPYI      
Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +PR +L  G DGLS  + I      +L   G   +E GY+Q   ++ + ++
Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGWLLLEHGYDQAEKIMTLMQA 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D  G  R+++  R
Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276


>gi|319779046|ref|YP_004129959.1| Methylase of polypeptide chain release factor [Taylorella
           equigenitalis MCE9]
 gi|317109070|gb|ADU91816.1| Methylase of polypeptide chain release factor [Taylorella
           equigenitalis MCE9]
          Length = 275

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 9/260 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             +S   L  V G+    + V  D ++ + Q+      + R L+ E I  ++G R+F  +
Sbjct: 17  RLESQIILAHVLGVDRVWLFVHDDVLICEEQKLEFDTLVQRRLEGEPIAYLVGSREFMGL 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L + +    PRP+TELLV+ AL F           RILDLGTG+GA+ +++    P  +
Sbjct: 77  ELNVDNSVLIPRPDTELLVECALDFLK---TTPTGARILDLGTGSGAIAISIANFMPKCE 133

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              VDIS +AL++A  NA  +GV       +  WF ++    G FD+IVSNPPYI S  +
Sbjct: 134 VYAVDISKEALKVAYLNAKNHGV--HIKFFEGSWFDALPYDVGTFDLIVSNPPYIASDDI 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR ++P  +L GG DGLS Y  I   V   ++       E G+ Q  ++ RI E
Sbjct: 192 HLQLGDVR-YEPITALVGGNDGLSEYIKIMKQVHDFIHSGSAIMFEHGWTQGAELRRILE 250

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +N  KD  G++RV 
Sbjct: 251 QGHCHKINTHKDLAGHERVT 270


>gi|313202187|ref|YP_004040845.1| HemK family modification methylase [Methylovorus sp. MP688]
 gi|312441503|gb|ADQ85609.1| modification methylase, HemK family [Methylovorus sp. MP688]
          Length = 297

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 126/275 (45%), Gaps = 18/275 (6%)

Query: 2   QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A  ++   + +  G +    +I      L         + + R L  E +  ILG R+F
Sbjct: 25  EARNEARMLMSQALGNVEHAWLIAHESDALPSAVASTFHDLLHRRLAGEPVAYILGNREF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +RL +S  T  PRP+TE LV++ALA     I   +  ++LDLGTGTGA+ LA+    P
Sbjct: 85  FGLRLAVSPATLIPRPDTETLVEAALA----HIPSEETRQVLDLGTGTGAIALAIAAHRP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG-LFDVI 168
             + + VD S  AL++A+ NA   G++              +     WF+ + G  FDVI
Sbjct: 141 QSRVIAVDASAAALQVARHNAEALGLATPEAGDQDTTKGNVEFRLGSWFTPLAGLKFDVI 200

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI          ++R  +P  +L  G+DGL   R I      HL   G   +E G
Sbjct: 201 VSNPPYIRKDDPHLQQGDLR-HEPLSALASGVDGLDDIRIIVQHAPAHLQPSGWLLLEHG 259

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Y+Q   V  +  +     V    D  G  RV L  
Sbjct: 260 YDQADAVATLMRNTGFSDVQHAHDLAGIARVTLGQ 294


>gi|306842977|ref|ZP_07475611.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Brucella sp. BO2]
 gi|306286905|gb|EFM58430.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Brucella sp. BO2]
          Length = 295

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 151/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +  +  +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGMAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|253997607|ref|YP_003049671.1| HemK family modification methylase [Methylotenera mobilis JLW8]
 gi|253984286|gb|ACT49144.1| modification methylase, HemK family [Methylotenera mobilis JLW8]
          Length = 292

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 129/262 (49%), Gaps = 7/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L     +    ++     VL           + R L  E +  ILG+R+FY
Sbjct: 26  DAKFEAQLLLQSALKVKRSWLLAHEQDVLPASVSADFETLLTRRLAGEPVAYILGYREFY 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +S DT  PRP+TE LV++ALA    +I       ILDLGTGTGAV LA+ +  P 
Sbjct: 86  GLNLKVSPDTLIPRPDTETLVEAALA----KIPTDTDYTILDLGTGTGAVALAIAQHRPH 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
            +   VD S  AL IA+ NA   G++ +     S WFS+VE   F++I+SNPPYIE    
Sbjct: 142 TQVTAVDASQGALHIAEHNAQQLGLT-QVRFSLSHWFSAVESERFNLIISNPPYIEQHDP 200

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L  G+DGL   R I      HL   G   +E GYNQ   V  +  
Sbjct: 201 HLGQGDLR-FEPISALASGVDGLDDIREIIAHSLIHLQPQGWLMLEHGYNQAHLVADLMA 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
              L  +   KD G NDRV + 
Sbjct: 260 ESGLVDIETIKDLGANDRVTIG 281


>gi|326796199|ref|YP_004314019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinomonas mediterranea MMB-1]
 gi|326546963|gb|ADZ92183.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinomonas mediterranea MMB-1]
          Length = 278

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 90/264 (34%), Positives = 126/264 (47%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L     +S   +    +  ++          + R L  E I  ++G +DF+ 
Sbjct: 21  AKLDAELLLAHCMQVSRTYLFTWSEKDIEPVCLTRFYRLLERRLVGEPIAYLIGKQDFWT 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL      I   +   ILDLGTGTGA+ LAL  E    
Sbjct: 81  LELDVSPTTLIPRPDTERLVEVALDL----IAGVEKPNILDLGTGTGAIALALAYERKDA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
              G D   +A+E+A  NA  N +S  F  + SDWFS V  +  F +IVSNPPYI+    
Sbjct: 137 LVSGADCVKQAVELATRNAEKNALSVNF--IHSDWFSEVPSDNQFHLIVSNPPYIDPNDK 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P  +L    +G+     I      +L+  G  + E GY+Q   V   F 
Sbjct: 195 HLSQGDVR-FEPDSALTADQEGMGDINRILSEAPHYLHDTGWLAFEHGYDQGEKVRLAFA 253

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           SR    V  F DYGGNDRV +  +
Sbjct: 254 SRGFLSVETFADYGGNDRVTIGQK 277


>gi|315500227|ref|YP_004089030.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Asticcacaulis excentricus CB 48]
 gi|315418239|gb|ADU14879.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Asticcacaulis excentricus CB 48]
          Length = 289

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   TG +   ++ DP  +L   Q+  L + + R  K   + RILG + F+ + L
Sbjct: 30  DARLLLEAATGYTRTDILTDPYKLLTAEQKATLDDYLTRREKRVPVARILGRKGFWKLLL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L+     PRPETE +VD  L  +    E+     + DLG G+GA+ L++L E P  KG+
Sbjct: 90  DLTPAVLVPRPETECIVDMILKTT----EEGQAFTLADLGVGSGAILLSVLSERPAAKGL 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G D+S +AL +A+ NA   G+  R   L++ W + + +  FD + SNPPYI S ++  L 
Sbjct: 146 GTDVSEEALAVARDNAANLGLDGRAAFLRTSWGAGLADASFDFVASNPPYIRSEVIPTLD 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP ++LDGG  GL  Y  +     R L   G   +EIGY+Q   V  + +    
Sbjct: 206 PEVRDHDPHLALDGGESGLDAYIEMIPEAFRILKAGGTAWMEIGYDQSAAVEDLMKKAGF 265

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
           F V  FKD     R+++  +
Sbjct: 266 FNVVTFKDLSDLPRIVIGQK 285


>gi|240015595|ref|ZP_04722135.1| HemK [Neisseria gonorrhoeae FA6140]
 gi|240114685|ref|ZP_04728747.1| HemK [Neisseria gonorrhoeae PID18]
 gi|268600328|ref|ZP_06134495.1| hemK protein [Neisseria gonorrhoeae PID18]
 gi|268584459|gb|EEZ49135.1| hemK protein [Neisseria gonorrhoeae PID18]
          Length = 301

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 44  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 103

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 104 TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 157

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 158 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 215

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 216 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 274

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 275 GFSGVEILPDLAGLDRVTLG 294


>gi|212213423|ref|YP_002304359.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuG_Q212]
 gi|212011833|gb|ACJ19214.1| peptide release factor-glutamine N5-methyltransferase [Coxiella
           burnetii CbuG_Q212]
          Length = 277

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   S   +   P+  L+  Q+  L+  + R +K E I  ILG ++F++
Sbjct: 22  PRLDAELLLECVLKKSRADLFAYPEIQLNSSQQKTLSAYVKRRVKGEPIAYILGQKEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRPETE+LV+  L      + K + +RI DLGTG+GAV LA+  E P +
Sbjct: 82  LNLKVTPDVLIPRPETEMLVEWILK----NLPKDEKLRIADLGTGSGAVALAIAVERPHW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D S  AL+IA+ NA  + +    +    +W  ++    +  IV NPPYI      
Sbjct: 138 TIDATDNSQAALKIAEINAKQHEIK-NCNFYHGEWCQALPRRDYHAIVGNPPYIPDKDQH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +PR +L  G DGLS  + I      +L   G   +E GY+Q   ++ + ++
Sbjct: 197 LQQ---LKHEPREALAAGSDGLSAIKIIIHEAKSYLVNGGRLLLEHGYDQAEKIMTLMQA 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   +D  G  R+++  R
Sbjct: 254 DGYREITDRRDLAGLSRMMVARR 276


>gi|258645289|ref|ZP_05732758.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM
           15470]
 gi|260402639|gb|EEW96186.1| protein-(glutamine-N5) methyltransferase [Dialister invisus DSM
           15470]
          Length = 288

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   L  V G S   +  + + +L  ++       I + ++  S   I+G ++F  
Sbjct: 28  ARLDSEILLSHVLGKSRIYLYTEFERILAAKELALFKKYIQKRIEGFSAAAIIGKKEFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++     PRP+TE  ++  + +          +++ DLGTG+GA+ +  L      
Sbjct: 88  LTLKVNEQVLIPRPDTETWLEKVIQY----YRNETGLKVADLGTGSGAILVGFLYYCRDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
            GVGVDIS +AL+IA+ N     +++R +  Q D+  +   E +FD I SNPPYI +  +
Sbjct: 144 VGVGVDISTEALKIAEENGQNLKLTDRVEWRQGDYLKAFDEEDIFDGIFSNPPYIPTKDI 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV+  +PR++LDGG DGL  Y  +A G + HL   G  +VE G  Q  D++ +F 
Sbjct: 204 GGLPGEVK-HEPRLALDGGTDGLYFYHLLAKGAAEHLKPGGFLAVEFGIGQATDILEMFR 262

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFCR 264
            S +       KDYGG +R  L+CR
Sbjct: 263 KSAQYEDFEVIKDYGGIERA-LYCR 286


>gi|253583343|ref|ZP_04860541.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium varium ATCC 27725]
 gi|251833915|gb|EES62478.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium varium ATCC 27725]
          Length = 369

 Score =  274 bits (702), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
              D+      + G++   + ++ +  ++++ +  +    I+R    + +  +LG  +FY
Sbjct: 107 PKLDAEYIFAYILGVNRLTLTLNFNKKIEEKDKEKIREYLILRGKNRKPLQYLLGEWEFY 166

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PR +TE+LV+    F L  +E     ++LD+GTG+GA+ + L KE P 
Sbjct: 167 GYPFKVDERVLIPRSDTEILVEQ-CKFILNELEN---PKVLDIGTGSGAIAVTLGKECPN 222

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
              +G DIS  ALE+A++N   N  +E    ++SD FSS +   FD I+SNPPYI     
Sbjct: 223 SVIIGADISEGALEVAEANREMNK-AENVKFMKSDVFSSFKDMKFDFIISNPPYIPLEEY 281

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV  ++P  +L    +G   Y  I+   S +LNK G  + E+GYNQ   V  + E
Sbjct: 282 NKLMPEVLKYEPSSALTDNGNGYYFYSKISKEASDYLNKGGFLAFEVGYNQAETVKELME 341

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                +    KDYGG DRV++  +
Sbjct: 342 ENGFDIFAIVKDYGGIDRVVIGKK 365


>gi|256059848|ref|ZP_05450035.1| methyltransferase, HemK family protein [Brucella neotomae 5K33]
 gi|261323818|ref|ZP_05963015.1| modification methylase [Brucella neotomae 5K33]
 gi|261299798|gb|EEY03295.1| modification methylase [Brucella neotomae 5K33]
          Length = 295

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLACEANDLGGHRRAMLF 287


>gi|194099711|ref|YP_002002846.1| HemK [Neisseria gonorrhoeae NCCP11945]
 gi|254492740|ref|ZP_05105911.1| hemK protein [Neisseria gonorrhoeae 1291]
 gi|268597897|ref|ZP_06132064.1| hemK protein [Neisseria gonorrhoeae FA19]
 gi|268600147|ref|ZP_06134314.1| hemK protein [Neisseria gonorrhoeae MS11]
 gi|268602560|ref|ZP_06136727.1| hemK protein [Neisseria gonorrhoeae PID1]
 gi|268681109|ref|ZP_06147971.1| hemK protein [Neisseria gonorrhoeae PID332]
 gi|268685212|ref|ZP_06152074.1| hemK protein [Neisseria gonorrhoeae SK-92-679]
 gi|268685589|ref|ZP_06152451.1| hemK protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291044872|ref|ZP_06570581.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2]
 gi|293397950|ref|ZP_06642156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria gonorrhoeae F62]
 gi|193935001|gb|ACF30825.1| HemK [Neisseria gonorrhoeae NCCP11945]
 gi|226511780|gb|EEH61125.1| hemK protein [Neisseria gonorrhoeae 1291]
 gi|268551685|gb|EEZ46704.1| hemK protein [Neisseria gonorrhoeae FA19]
 gi|268584278|gb|EEZ48954.1| hemK protein [Neisseria gonorrhoeae MS11]
 gi|268586691|gb|EEZ51367.1| hemK protein [Neisseria gonorrhoeae PID1]
 gi|268621393|gb|EEZ53793.1| hemK protein [Neisseria gonorrhoeae PID332]
 gi|268625496|gb|EEZ57896.1| hemK protein [Neisseria gonorrhoeae SK-92-679]
 gi|268625873|gb|EEZ58273.1| hemK protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291011766|gb|EFE03762.1| protein methyltransferase hemK [Neisseria gonorrhoeae DGI2]
 gi|291611896|gb|EFF40965.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria gonorrhoeae F62]
          Length = 295

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 38  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 98  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 151

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 152 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 209

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 210 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 268

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 269 GFSGVEILPDLAGLDRVTLG 288


>gi|307131077|ref|YP_003883093.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Dickeya dadantii 3937]
 gi|306528606|gb|ADM98536.1| release factors RF-1 and RF-2 N5-glutamine methyltransferase
           [Dickeya dadantii 3937]
          Length = 283

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D +   L   + R    E I  ++G R+F++
Sbjct: 20  PKRDAEILLEHVTGKGRTFLLAFGETELTDGEGSALAALLARRATGEPIAYLVGHREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA             +LDLGTGTGA+ LA+  E P  
Sbjct: 80  LSLAVSPATLIPRPDTECLVEHALAHL-----PAGASSVLDLGTGTGAIALAIAHERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + VG+D    A+ +A  NA   G++     L  DWFS ++G  F +IVSNPPYI+     
Sbjct: 135 QVVGIDRQPDAVALASHNASQLGIA-NARFLPGDWFSPLDGQRFSLIVSNPPYIDEHDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R I       L   G   +E G+ Q   V  +   
Sbjct: 194 LSRGDVR-FEPASALVAREAGLADLRQIIRQAGGFLLDSGWLLLEHGWQQGDAVRSLLTQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V  ++DYG N+RV L  
Sbjct: 253 YGFVQVKTYRDYGDNERVTLGQ 274


>gi|84686943|ref|ZP_01014827.1| Putative methylase [Maritimibacter alkaliphilus HTCC2654]
 gi|84665140|gb|EAQ11620.1| Putative methylase [Rhodobacterales bacterium HTCC2654]
          Length = 279

 Score =  274 bits (702), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 97/258 (37%), Positives = 136/258 (52%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L +V  +   ++ ++ D  +         + + R +  E + +I+G R F+ 
Sbjct: 22  AARDAQLLLAQVLRIEVMRLSLERDMQVSPADMLAYEDMLDRRIAREPVSKIIGRRQFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T++ D  +PRPETE L+  AL  +          RILDLGTG+G + + LL E    
Sbjct: 82  RDFTVTRDVLDPRPETETLIAEALTGA-------PPSRILDLGTGSGILAITLLAEWREA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V  D+S  AL++A  NA  NGV  R   L SDWF+ V+G FD+IVSNPPYI +  +  
Sbjct: 135 FAVATDLSDPALKVAARNATLNGVDNRLTFLASDWFARVQGRFDLIVSNPPYIAADEMPS 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  FDP+++L  G DGL  YR IA G   H++  G   VEIG+ Q   V  IF + 
Sbjct: 195 LAPEVLGFDPQMALTPGGDGLDPYRKIAAGALAHMDPGGRLLVEIGFRQGRAVSDIFAAA 254

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L  V    D  G DRV+
Sbjct: 255 GLDDVRIHPDMDGRDRVI 272


>gi|87309296|ref|ZP_01091432.1| hemK protein [Blastopirellula marina DSM 3645]
 gi|87287935|gb|EAQ79833.1| hemK protein [Blastopirellula marina DSM 3645]
          Length = 294

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 4/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L +  G    ++    D V+ +  R      + +      +  +LG R+FY+
Sbjct: 28  PRLDAELLLAQALGCKRIELYTRFDEVVAEEPRGKFRQLVKQRAAGMPVAYLLGRREFYS 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRPETE LV +AL        K +  RI D+G G+G + + L K+ P  
Sbjct: 88  RDFRVTPDVLIPRPETEHLVIAALDRLRETA-KTETARICDVGAGSGCIAITLAKDLPKL 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   +DIS  AL++A+ NA  +GV+E+   ++SD  +++    +FD+IVSNPPYI  V  
Sbjct: 147 QVTAIDISAAALQVAQQNAEEHGVAEQIKFVKSDLLTALPENAVFDLIVSNPPYIGLVEK 206

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V  ++P ++L  G DGL   R +      HL   G   +E G       V I  
Sbjct: 207 PSLPKDVLQYEPHVALFSGEDGLDAIRELVRQAPSHLKPGGWLLIEFGPVVAEAAVAIVT 266

Query: 241 SRKLFLV-NAFKDYGGNDRVLLFCR 264
           +   F      KD     RVL+  R
Sbjct: 267 ASDQFEAPTVEKDLAKLPRVLIARR 291


>gi|332967821|gb|EGK06920.1| protein methyltransferase HemK [Kingella kingae ATCC 23330]
          Length = 269

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 113/263 (42%), Gaps = 11/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  +TGLS  Q+I      L       L     R  + E I  +LG R+FY 
Sbjct: 14  PRNETRMLLQYITGLSRSQLITHDSETLSPEHESSLHALCQRREQGEPIAYLLGEREFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T+S     PRPETE L+++AL     R        + D+GTG+G + ++   E    
Sbjct: 74  RSFTVSPAVLIPRPETEHLLEAALCRLPAR------GFLWDMGTGSGIIAISAKLERTDA 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
                DIS  AL IA+ NA   G +      Q  WF        FDVI SNPPYI S   
Sbjct: 128 NVFASDISPDALNIAQHNAQRLGAA--VAFAQGSWFDCAVSAHKFDVIASNPPYINSHDT 185

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGL+H R I      +L   G   +E GY+Q   +  +F 
Sbjct: 186 HLQQGDLR-FEPAHALTDFADGLAHIRHIVARAPDYLQPQGWLLLEHGYDQGAAIRDLFA 244

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V   +D  G +RV L  
Sbjct: 245 QHGYTQVETLRDLAGLERVTLGQ 267


>gi|270157831|ref|ZP_06186488.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae
           D-4968]
 gi|289163903|ref|YP_003454041.1| methyltransferase HemK [Legionella longbeachae NSW150]
 gi|269989856|gb|EEZ96110.1| protein-(glutamine-N5) methyltransferase [Legionella longbeachae
           D-4968]
 gi|288857076|emb|CBJ10891.1| putative methyltransferase HemK [Legionella longbeachae NSW150]
          Length = 268

 Score =  274 bits (701), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 135/264 (51%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R++   L  V   +   +   P+++L  +Q     + + +  K   I  ++G R+F+
Sbjct: 11  NPQREAEILLGHVLDKTRAYLFAHPETLLTPKQLAAFEHLMAQRAKGIPIAYLMGQREFW 70

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++  T  PR ETELLV  AL F    I  +    IL+LGTG+GA+ LAL KE P 
Sbjct: 71  SLDLKVNEHTLIPRHETELLVALALEF----IPDQPDTHILELGTGSGAIALALAKERPS 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
           ++ V  DIS  AL++AK NA  N + E  +   SDWFS +    +  IV+NPPYI     
Sbjct: 127 WRIVACDISEDALKVAKENAQNNKI-ENINFFLSDWFSGIPQRQYHAIVTNPPYIAEDDP 185

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L    +GL+  + I +    +L   G+  +E G++QK  V  I  
Sbjct: 186 HLQQGDLR-FEPRNALVSSQEGLADLQCIIEHGYEYLLPQGMLLLEHGFDQKSKVQAILN 244

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
             +   +  ++D  G+DRV    R
Sbjct: 245 RLRYKSIRCWQDIQGHDRVSGGWR 268


>gi|62290729|ref|YP_222522.1| hypothetical protein BruAb1_1847 [Brucella abortus bv. 1 str.
           9-941]
 gi|261220925|ref|ZP_05935206.1| modification methylase [Brucella ceti B1/94]
 gi|62196861|gb|AAX75161.1| HemK [Brucella abortus bv. 1 str. 9-941]
 gi|260919509|gb|EEX86162.1| modification methylase [Brucella ceti B1/94]
          Length = 290

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 25  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 85  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 145 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 204

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 205 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 264

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 265 SLAGEANDLGGHRRAMLF 282


>gi|220933706|ref|YP_002512605.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
 gi|219995016|gb|ACL71618.1| HemK protein, putative protoporphyrinogen oxidase [Thioalkalivibrio
           sp. HL-EbGR7]
          Length = 274

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 7/260 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ R++   L  V G     ++      L             R    E +  +   R F+
Sbjct: 15  ESRREAEILLGHVLGRDRAWLMSHDTDPLPPEPVARYRALWARRQAGEPVAYLTRRRGFW 74

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +  +   PRPETELLV++AL      I       + DLGTG+GA+ LAL  E P 
Sbjct: 75  TLDLAVGPEVLIPRPETELLVETALGL----IPTDAAWDLADLGTGSGAIALALASERPA 130

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            + V  D S  AL +A++NA  +G++     +Q +W++ + G  F ++VSNPPY+     
Sbjct: 131 CRVVATDKSPGALAVAEANARDHGLA-NLRFVQGEWWAPLAGERFHLVVSNPPYVAEADP 189

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L  G DGL   R I      HL+  G   +E GY+Q   V  +  
Sbjct: 190 HLARGDLR-FEPPTALASGPDGLDDLRRIIKAAPTHLHPGGHLLLEHGYDQGEAVRALLR 248

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V  ++D GGN+RV 
Sbjct: 249 TAGFSEVQTWRDLGGNERVT 268


>gi|313667605|ref|YP_004047889.1| Hemk protein [Neisseria lactamica ST-640]
 gi|313005067|emb|CBN86499.1| putative Hemk protein [Neisseria lactamica 020-06]
          Length = 273

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   +  +  Q++      + D  R          L  E +  +LGWR+FY 
Sbjct: 13  PKNEARMLLQYASEYTRVQLLTRGGEEMPDEVRQRADRLAQSRLNGEPVAYLLGWREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFAVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G +   +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVCASDISPPALETARKNAADLGAA--VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 EHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DRV L 
Sbjct: 244 AENGFSGVETLPDLAGLDRVTLG 266


>gi|303228389|ref|ZP_07315222.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-134-V-Col7a]
 gi|302516891|gb|EFL58800.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-134-V-Col7a]
          Length = 289

 Score =  274 bits (701), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G +   +  + D  L+  +       ++   K  S+  + G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGYSVASLTGTKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE LV+  L        ++D +RILD+ TG G + L+LL   P  
Sbjct: 87  LTFAVNDKVLIPRPDTETLVEYVL----STYHQQDAIRILDMCTGPGTILLSLLHYLPTA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            G+G+DIS  ALEIA  N     +  R +  +SD FS +E    LFDVIVSNPPYI    
Sbjct: 143 TGMGLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLED 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V + +P I+L GG DGL  YR +A     +L   GL + E+GY+Q  DV  + 
Sbjct: 203 KKILSPDVLN-EPHIALFGGEDGLDFYRQLAMECVTYLKPYGLVAFEVGYDQAEDVKSLL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLFC 263
           ES      ++   D  G +RV+   
Sbjct: 262 ESVGSYVDISFAADLAGINRVVTAR 286


>gi|149377993|ref|ZP_01895718.1| hemK protein [Marinobacter algicola DG893]
 gi|149357702|gb|EDM46199.1| hemK protein [Marinobacter algicola DG893]
          Length = 282

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 124/263 (47%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  VTG S       P+  LD       +  + +  +   +  +LG ++F++
Sbjct: 24  PRLDAELLLGFVTGWSRTTFRAWPERELDATLIARFSTLVEQRCEGHPVAHLLGEQEFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TE LV++ALA  LP         +LDLGTGTGA+ LAL  E   +
Sbjct: 84  LPLKVNPSTLIPRPDTECLVEAALALDLPA-----NASVLDLGTGTGAIALALASERSGW 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +    D    A+++A  NA   G+       QS+WFS +   +FD+IVSNPPYI    V 
Sbjct: 139 QVSACDAILAAVDLAIDNAARLGLP--VTVQQSNWFSDLPPAVFDLIVSNPPYIAGDDVH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I       L   G   +E GY Q   V R+   
Sbjct: 197 LGQGDVR-FEPASALVAGRDGLDDIRLIVAEAPDWLVGGGWLILEHGYEQGAAVRRLLIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   +DYG  DR  L  +
Sbjct: 256 AGFASVETGQDYGQRDRFTLGRK 278


>gi|33152003|ref|NP_873356.1| protein-glutamine N-methyl transferase [Haemophilus ducreyi
           35000HP]
 gi|33148225|gb|AAP95745.1| Protein-glutamine N-methyl transferase [Haemophilus ducreyi
           35000HP]
          Length = 290

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 137/262 (52%), Gaps = 4/262 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D++  L  VT  S   +    ++ L   Q   LT  + R  K E I  ILG ++F
Sbjct: 24  LNPKIDANLLLQAVTKKSKAMLFAFGETHLSHDQLAELTLLLQRRQKGEPIAYILGEKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  T  PRP+TE +V+ AL ++  R+E++  + ILDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVSKHTLIPRPDTERVVEIALDWAYKRLEQQTNLHILDLGTGTGAIALALASELG 143

Query: 121 F-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
                  VDI  +A+ +A+ N    G   +   LQSDWF++++   FD+IVSNPPYI+  
Sbjct: 144 DKAVITAVDIKAEAVSLAEENRQHLGFK-QVTFLQSDWFNALQSQQFDLIVSNPPYIDKT 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +    +VR F+P  +L     GLS    I +    +L   G   +E G+ Q   V + 
Sbjct: 203 DENLKLGDVR-FEPLSALVSAQQGLSDLYKIIENAPLYLTAKGALILEHGWQQATAVQQF 261

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F+      + +++DY G DRV 
Sbjct: 262 FQHYDWDEIQSWQDYAGLDRVT 283


>gi|251780834|ref|ZP_04823754.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243085149|gb|EES51039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 287

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L +V       +I   +  +D          I +  +   +  IL   +F N
Sbjct: 25  SRLDAELLLGKVLNKEKIYLITHREEKIDKIDEEKYMKLINKRKEKMPVKYILNECEFMN 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LV+  L      I++ D  +I DL  G+GA+ ++L       
Sbjct: 85  MNFYVEPGVLIPRADTEILVEEVLE----NIDENDSKKICDLCCGSGAIGISLANLRKNI 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               +D      ++   N     V +R + ++SD  +   +    +D+IVSNPPYIE   
Sbjct: 141 NVDLIDYYEIPEKVTLINIKKYDVLDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEECE 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V++++P  +L GG DGL  Y+ I +     LN+ G+ + EIGYNQ   V  + 
Sbjct: 201 INDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKELM 260

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E +    V   KD  G DRV++ 
Sbjct: 261 EDKNFIEVKIVKDLAGLDRVVIG 283


>gi|89094906|ref|ZP_01167838.1| Methylase of polypeptide chain release factor [Oceanospirillum sp.
           MED92]
 gi|89080863|gb|EAR60103.1| Methylase of polypeptide chain release factor [Oceanospirillum sp.
           MED92]
          Length = 283

 Score =  273 bits (700), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 125/258 (48%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    LC V       +   P+  L   ++  L   + R LK E +  I+G R F++
Sbjct: 20  PQLDMQYLLCHVLDKPESYLFTWPERELQPGEQESLEQLLQRRLKGEPVAHIIGKRGFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +S  T  PRP+TE+LV+ AL             R++DLGTGTGAV LAL KE+P +
Sbjct: 80  FELEVSPHTLIPRPDTEVLVEKALELC-----SLPAARVVDLGTGTGAVALALAKENPGW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D   +A E+A+ N     ++     LQ  W+    G FD+IVSNPPYI+      
Sbjct: 135 EVFASDYVKEAAELAERNRQRLHIT-NMQVLQGSWYEPHSGRFDMIVSNPPYIDPEDPHL 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     G++    IA      LNK+G+ + E G++Q      + ++ 
Sbjct: 194 DQGDVR-FEPLSALTAENQGMADIELIAKQGRNFLNKNGVLAFEHGFDQGPICRNLLQTL 252

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   +DYG N+RV 
Sbjct: 253 GYLEVGTQRDYGQNERVT 270


>gi|309390219|gb|ADO78099.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium praevalens DSM 2228]
          Length = 289

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   +  +  +    + V  D  L  R+       I +  +   +  I+  ++F +
Sbjct: 22  SRLDAEVLMADLLDMERINLYVKYDYPLKSREIDKYREMIKKRAQRIPVAYIIQKKEFMS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRP+TE LV+  + +   +  K    +I+D+ TG+GA+ ++L       
Sbjct: 82  LEFKVEPGVLIPRPDTENLVEKVIKYCRQQGLKTP--QIIDVCTGSGAIAVSLAHYLQKA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
           K VG DIS  AL+IA+ N   + ++ER   L+SD             D++VSNPPYI   
Sbjct: 140 KVVGTDISNSALKIARQNMKKHDLTERMSILKSDLLKEFIKREIKGIDILVSNPPYITEA 199

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  EV+  +P+ +L  G DGL  YR +     + L   G   +EIGY Q   V  I
Sbjct: 200 EMETLAPEVKK-EPKKALVAGKDGLDFYRRLIPEAEKVLKNGGKLFLEIGYQQAAAVREI 258

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F       +   KDY  NDR++
Sbjct: 259 F-GANWSEIEVEKDYSENDRIV 279


>gi|23502721|ref|NP_698848.1| hemK protein [Brucella suis 1330]
 gi|23348736|gb|AAN30763.1| hemK protein [Brucella suis 1330]
          Length = 283

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/258 (40%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 18  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 77

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE L++  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 78  FRLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 138 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 198 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 257

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 258 SLAGEANDLGGHRRAMLF 275


>gi|294678209|ref|YP_003578824.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003]
 gi|294477029|gb|ADE86417.1| protein methyltransferase HemK [Rhodobacter capsulatus SB 1003]
          Length = 252

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 92/251 (36%), Positives = 129/251 (51%), Gaps = 8/251 (3%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V  +   ++ +   S L + +       +      + + +I G R F+     ++  T +
Sbjct: 9   VMEVPPERLYLSIHSELSEDRHKQFLKCLAAREARQPVAQITGHRAFWKHEFRVTRATLD 68

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETELLV+ AL  +          R+LDLGTGTG + L+LL E P  +GV  DIS  A
Sbjct: 69  PRPETELLVEVALETAFE--------RVLDLGTGTGCILLSLLAERPAARGVATDISEAA 120

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L +A+ NA    + ER   +Q DWF  VEG FD+IVSNPPYI    +  L  +VRD++P 
Sbjct: 121 LAVAQENAERLSLYERAHFVQGDWFHGVEGRFDLIVSNPPYITEAEMAELAPDVRDWEPH 180

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L  G DGL  YR IA G    L   G  ++EIG  Q   V  +  ++    V   +D 
Sbjct: 181 TALTPGGDGLGAYRAIAFGAFARLKPGGRIALEIGPTQAAAVSAMLTAQGFADVEVRQDL 240

Query: 254 GGNDRVLLFCR 264
           G  DRV+L  R
Sbjct: 241 GHRDRVVLAHR 251


>gi|256112205|ref|ZP_05453126.1| methyltransferase, HemK family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|265993633|ref|ZP_06106190.1| modification methylase [Brucella melitensis bv. 3 str. Ether]
 gi|262764614|gb|EEZ10535.1| modification methylase [Brucella melitensis bv. 3 str. Ether]
          Length = 295

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVGALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|59802323|ref|YP_209035.1| hypothetical protein NGO2015 [Neisseria gonorrhoeae FA 1090]
 gi|59719218|gb|AAW90623.1| putative protoporphyrinogen oxidase [Neisseria gonorrhoeae FA 1090]
          Length = 285

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 28  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 88  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 142 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 200 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 258

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 259 GFSGVEILPDLAGLDRVTLG 278


>gi|86138686|ref|ZP_01057259.1| modification methylase, HemK family protein [Roseobacter sp.
           MED193]
 gi|85824746|gb|EAQ44948.1| modification methylase, HemK family protein [Roseobacter sp.
           MED193]
          Length = 284

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L+          I        +  +LG R+FY
Sbjct: 28  DPARDARILLAHAARIEASRVTLIAPEDLEPEVAERYEQLIALRAIRVPVSHLLGEREFY 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++ALA            R+LDLG G+G + + LL ESP 
Sbjct: 88  GRRFKVSKDVLDPRPETETLIEAALA--------EPFERVLDLGLGSGCILVTLLAESPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  A   A +NA+ + V  R D  QSDWFS+V G FD+IVSNPPYI    + 
Sbjct: 140 ATGLGVDLSEAACLQASANAILHRVESRIDIQQSDWFSNVTGRFDLIVSNPPYIALDEMA 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL+ YR +A GV  HL   G   +EIG  Q   V  + + 
Sbjct: 200 DLSPEVRQHEPDMALTDGGDGLAAYRALAAGVRAHLRSGGRLCLEIGPTQGQAVAAMMQE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  +    D  G DRV+   
Sbjct: 260 AGLTNIAVLPDLDGRDRVVFAR 281


>gi|301060380|ref|ZP_07201243.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [delta proteobacterium NaphS2]
 gi|300445576|gb|EFK09478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [delta proteobacterium NaphS2]
          Length = 299

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 132/263 (50%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L     +    + ++ +  L +++       I R L+HE +  I G ++F+
Sbjct: 26  NARLNAEVLLAYQLQVQRISLYLNFEQPLTEKEVSGFRRLIKRRLEHEPLQYITGKQEFW 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++     PRPETE+LV+ A+  +    E+   +R LDLGTG+G + +A+ K+ P 
Sbjct: 86  SLSFQVNPHVLIPRPETEILVEQAMDLATALTEEGTQLRFLDLGTGSGVIAVAMAKQIPE 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
                 DIS KAL++A++NA  +GVS     +Q D F  +   +  F +I SNPPY+ + 
Sbjct: 146 SLVFATDISGKALDVARANAQAHGVSSSITFIQGDLFEPLMLEKPAFHLIASNPPYVCTH 205

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237
            +  L  E+  ++PR +LDGG DG+ + + I     R L   G   +E+   Q    +  
Sbjct: 206 EISGLQSEIALYEPRAALDGGKDGMDYLKEIIKQAPRFLLPGGWLLLEMSPFQVEKALFA 265

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           + E+         +DY  + RV+
Sbjct: 266 LAETDVYQNTKPVQDYSHHQRVI 288


>gi|119775697|ref|YP_928437.1| hemK family protein [Shewanella amazonensis SB2B]
 gi|119768197|gb|ABM00768.1| hemK family protein [Shewanella amazonensis SB2B]
          Length = 285

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L    G +   +   P+  L   Q       I R  K   +  ILG R+F++++
Sbjct: 27  LDAEVLLQHCLGKNRTFLYTWPERPLTSEQWKHFEQLINRRAKGVPVAHILGEREFWSLK 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRP+TE+LV++AL   LP     D  R+LD+GTGTGA+ LAL  E P ++ 
Sbjct: 87  FLVNETTLIPRPDTEMLVETALNLPLP-----DNARVLDMGTGTGAIALALASERPNWRI 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             +D    A+ +AK+N    G+S + + LQSDWFS+V +  FD+IVSNPPYI+       
Sbjct: 142 TALDKVDDAVALAKANREQLGLS-QVEILQSDWFSAVRDADFDLIVSNPPYIDEHDEHLA 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VR F+P  +L    +G +    IA     HL   G   +E G+ Q + +     S  
Sbjct: 201 MGDVR-FEPLSALTAADEGYADLNHIAMHAREHLKVGGYLLLEHGFAQALKLRETLVSLG 259

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V   +D+G NDR  L 
Sbjct: 260 YDKVATVRDFGSNDRCTLG 278


>gi|332993698|gb|AEF03753.1| peptide release factor-glutamine N5-methyltransferase [Alteromonas
           sp. SN2]
          Length = 288

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V       +   PD  L           + +  +   +  + G RDF+ 
Sbjct: 20  PAVDAKVLLSHVLDKPQVYLFTWPDKTLSVDAISQYKTLVAKRAQGIPVAYLTGSRDFWT 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRI----EKRDVVRILDLGTGTGAVCLALLKE 118
           +RL  S  T  PRP+TE+LV+  L+           + + + I DLGTGTGA+ LAL  E
Sbjct: 80  LRLATSPHTLIPRPDTEVLVEQTLSCIASAEFALEVEDNKLAICDLGTGTGAIALALASE 139

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P     GVD+  +A+++A SNA  N ++      QS WF ++    F VIVSNPPYIE 
Sbjct: 140 LPTANITGVDLLHEAVQLATSNAALNSIT-NAQFKQSSWFDNLANEKFHVIVSNPPYIEI 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +VR F+P  +L  G DGL   + I      HL + GL + E G++Q   V  
Sbjct: 199 SSPFLQQGDVR-FEPASALTSGADGLDDIKHIIALAPAHLLEGGLLAFEHGFDQAKAVGD 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           +  +     V   KDYGGNDRV 
Sbjct: 258 LLNAHGFVNVCTEKDYGGNDRVT 280


>gi|332184656|gb|AEE26910.1| modification methylase, HemK family [Francisella cf. novicida 3523]
          Length = 284

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V  +    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLDVDKTYLCINSDRRLDKNTLKEIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE+LV + L      ++K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTEVLVSTVLDDI---VDKNAKLKILDLGTGTGAIGLALAAELVNSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK+NA  N ++     +QS W++S++ G FD+IVSNPPYI+      
Sbjct: 142 IVAVDLYQQSLDVAKNNAQANNIT-NVKFIQSSWYTSLDTGKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V++++P  +L    +GL+  + I       LN  GL  +E G+ Q   V  +F   
Sbjct: 200 IEQSVKEYEPARALFAADNGLADIKEIISQAKNFLNPGGLVYIEHGFTQADAVTALFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKTVKDLNNNDRCT 277


>gi|329847925|ref|ZP_08262953.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Asticcacaulis biprosthecum C19]
 gi|328842988|gb|EGF92557.1| protein-glutamine-N5 methyltransferase, release factor-specific
           [Asticcacaulis biprosthecum C19]
          Length = 284

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L   T  +   +I DP   L   Q   L + + R  K E + RILG + F+ + L
Sbjct: 27  DARLLLEAATDATRTDIITDPYRELTAEQEDTLNSYLDRRTKREPVARILGRKGFWKLLL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS     PRPETE++VD  L  S P     D   I DLG G+GA+ L++L E P  KG+
Sbjct: 87  NLSDHVLIPRPETEVIVDMILKQSQP----SDAFTIADLGIGSGAILLSVLAERPAAKGL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G DIS +AL +A+ NA   G+  R   L++ W S + +  FD++ SNPPYI S ++  L 
Sbjct: 143 GTDISEEALAVARDNAANLGLDGRAAFLRTSWGSGLADASFDIVASNPPYIRSDVIPTLD 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV++ DP ++LDGG  GL+ Y  +A  + R L   G   +EIG++Q  DV ++      
Sbjct: 203 PEVKNHDPHLALDGGPTGLAAYEELAPEIFRLLKPGGRAWLEIGFDQSQDVEKLMNDAGF 262

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V  + D     RV+   +
Sbjct: 263 LNVATWLDLSNLPRVVTATK 282


>gi|161619786|ref|YP_001593673.1| HemK family methyltransferase [Brucella canis ATCC 23365]
 gi|254704886|ref|ZP_05166714.1| HemK family methyltransferase [Brucella suis bv. 3 str. 686]
 gi|260567640|ref|ZP_05838110.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|261755580|ref|ZP_05999289.1| modification methylase [Brucella suis bv. 3 str. 686]
 gi|161336597|gb|ABX62902.1| methyltransferase, HemK family [Brucella canis ATCC 23365]
 gi|260157158|gb|EEW92238.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|261745333|gb|EEY33259.1| modification methylase [Brucella suis bv. 3 str. 686]
          Length = 295

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 105/258 (40%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE L++  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALMELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|17986476|ref|NP_539110.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|260562789|ref|ZP_05833275.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|17982075|gb|AAL51374.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
 gi|260152805|gb|EEW87897.1| methyltransferase [Brucella melitensis bv. 1 str. 16M]
          Length = 295

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATRLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQLIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALAKARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|323702618|ref|ZP_08114280.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532437|gb|EGB22314.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfotomaculum nigrificans DSM 574]
          Length = 285

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 7/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            DS   L  +TGL    +I   D  L   Q       + R    E +  + G ++F  + 
Sbjct: 24  LDSQVLLSHITGLDRTGLITRGDQPLTPAQLQQYEKLLERRAGGEPVAYLTGHKEFMGLD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S     PRP+TEL+V+ A+  SL R      +  +D+GTG+GA+ + L    P  + 
Sbjct: 84  FIVSPAVLIPRPDTELMVERAV--SLLRQSGARPLPAVDVGTGSGAIAVTLAHLVPGLQV 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIV 180
             +DIS  AL +A+ NA  +GV++R    Q +        ++G   VI +N PYI S  +
Sbjct: 142 YAIDISPDALAVARQNAARHGVADRVKFCQGNLLEPIPADLQGKVSVITANLPYIPSGDI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+DF+PR++LDGG DGL+ YR +     R L+  G   +EIG  Q      +  
Sbjct: 202 SGLMTDVKDFEPRLALDGGPDGLALYRKLIPRAHRLLHPGGHLLMEIGPGQGAAAKALLP 261

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +          D  G +R++
Sbjct: 262 AASWT-ARLELDLAGRERLV 280


>gi|197104293|ref|YP_002129670.1| modification methylase HemK [Phenylobacterium zucineum HLK1]
 gi|196477713|gb|ACG77241.1| modification methylase HemK [Phenylobacterium zucineum HLK1]
          Length = 287

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 93/260 (35%), Positives = 144/260 (55%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +      +   ++ DP   L   Q   L + + R  K E +  ILG + F+ + L
Sbjct: 27  DARLLVEAAADATRADIVTDPYRPLTPEQEARLQDYLARREKREPVSHILGRKGFWKIML 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TE +VD AL        +     +LDLG G+GA+ LA+L E P  KG+
Sbjct: 87  RVTPDVLTPRPDTETVVDVALK----AFPEHAPWSVLDLGVGSGAILLAILAERPAAKGL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
           G+D S +AL +A+ NA   G++ R   L+ DW + + +  FD++VSNPPYI S +++ L 
Sbjct: 143 GIDASEEALAVARDNAAALGLAGRTALLRGDWTAGLGDSAFDLVVSNPPYIASDVLETLE 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+D++PR++L+GG DGL  YR +A  + R L   G  +VEIGY+QK  V  +F +   
Sbjct: 203 PEVKDYEPRLALEGGADGLDAYRILAPEIVRVLKPGGRFAVEIGYDQKDAVEALFRAAGA 262

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   +D    DRV+   +
Sbjct: 263 EDVRTIRDLADRDRVVAGAK 282


>gi|310779237|ref|YP_003967570.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ilyobacter polytropus DSM 2926]
 gi|309748560|gb|ADO83222.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ilyobacter polytropus DSM 2926]
          Length = 376

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
               ++      V   +   + +D    + + ++  +   I++  +  + +  ILG  +F
Sbjct: 116 NPKLEAEYIFSHVLKTNRLTLTLDFTRKISEEEKKLIKEMIIKRARDKKPLQYILGEEEF 175

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  +  +      PRPETELLV+  +      +       ILD+G G+GA+ + L K+ P
Sbjct: 176 FGYKFKVDERVLIPRPETELLVEQCIVL----MSDVKTPFILDIGVGSGAISVTLGKKIP 231

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             K +GVDIS  ALE+A  N   N V      ++SD F +V    FD+IVSNPPYI    
Sbjct: 232 TSKVLGVDISDGALEVANQNKELNNVK-NVKFIKSDVFENVSYKEFDMIVSNPPYIPEKE 290

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  EV+ ++P+++L    +GL  Y+ I    S +L   G+ + E+GYNQ   V  + 
Sbjct: 291 YKILMHEVKKYEPKLALTAEDEGLYFYKLITKKASDYLKNGGVLAFEVGYNQAQKVKNMM 350

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E  +   +   KDY   +R+++  +
Sbjct: 351 EDNEFENIVIVKDYHQIERIVIGKK 375


>gi|90422035|ref|YP_530405.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisB18]
 gi|90104049|gb|ABD86086.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB18]
          Length = 291

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 102/263 (38%), Positives = 138/263 (52%), Gaps = 4/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  V GL    ++V    +L   Q   L   + R L  E + RI+G ++F+ 
Sbjct: 29  AELDARLLIGAVLGLDLTGLMVGAARLLTPEQASQLDALVTRRLAGEPVARIVGIKEFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L L  DT  PRP+TE +V++AL     R       RI DLGTG+GA+ LALL E P  
Sbjct: 89  LPLALCGDTLVPRPDTETIVEAALQLFAGR---PAPQRIADLGTGSGAILLALLSEWPQA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A++NA   G+ +R   +  D+ S++ G FD+IVSNPPYI S  +  
Sbjct: 146 CGVASDISVAALHTARANAARLGLGDRAAFVACDYASALRGPFDLIVSNPPYIRSADIAA 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR +LDGG DGL+ YRTI    +  L+  G   VEIG  Q  +V  +  + 
Sbjct: 206 LDREVRDHDPRRALDGGADGLAAYRTITTQAAGLLSPGGALIVEIGQGQGDEVSALMRAA 265

Query: 243 KLFLVN-AFKDYGGNDRVLLFCR 264
            L        D  G  R +   R
Sbjct: 266 GLTTDRPPTPDLAGIGRAVTGRR 288


>gi|188992911|ref|YP_001904921.1| Protein methyltransferase HemK [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734671|emb|CAP52881.1| Protein methyltransferase HemK [Xanthomonas campestris pv.
           campestris]
          Length = 283

 Score =  273 bits (698), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +       +   Q       + R  + E +  + G R F+ 
Sbjct: 22  ARSDAEPLLLHALGRDRAWLFAHGRDPVPAEQAQRFGALVERRHQGEPVAYLTGSRGFWT 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PR +TE LV+ AL     R+++   +R+ DLGTG+GA+ LA+  E P  
Sbjct: 82  LDLAVSTATLIPRADTETLVELALE----RLQQTASIRVADLGTGSGAIALAIASERPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +  D S  AL IA+ NA  +G+    +     W   + G  FD+I SNPPYI +    
Sbjct: 138 QLIATDASADALAIARHNAHAHGL-HNVECRLGHWLQPLAGERFDLIASNPPYIAATDPH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +
Sbjct: 197 LQQGDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGEAVAALLTA 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V   +D    DRV L  
Sbjct: 256 RGFAAVATHQDLEQRDRVTLGQ 277


>gi|167625122|ref|YP_001675416.1| HemK family modification methylase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355144|gb|ABZ77757.1| modification methylase, HemK family [Shewanella halifaxensis
           HAW-EB4]
          Length = 280

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V       +   PD  L+  Q F     + + L+   I  I+G R+F++
Sbjct: 23  ASLDAEVMLLHVINKPRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFRVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAHERNEW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +D    A+ +AK N     + E+ D  QSDWF +VE   F++IVSNPPYI+     
Sbjct: 138 QVCAIDKVEDAVALAKVNRANLKL-EQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L   + G +    IA+    +L   G   +E GY Q +++      
Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIAESARDYLAPGGYLLLEHGYQQAIELREKLIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277


>gi|302390588|ref|YP_003826409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermosediminibacter oceani DSM 16646]
 gi|302201216|gb|ADL08786.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermosediminibacter oceani DSM 16646]
          Length = 290

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  V G+    + + P+  L   +       + +      +  I G ++F+ + 
Sbjct: 24  LDAEVILANVLGVRRIDLFIHPERRLCAEEIRTYRALVEKRSSRVPVAYITGSKEFFTLD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PRPETE LV+  L     RI      ++++L  G+GAV +++         
Sbjct: 84  FHVREGVLIPRPETEFLVEEILR----RISWVTKPKVVELCCGSGAVAVSVAFFKKDAVV 139

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV 180
              DIS  A ++   NAV +GV +R   L+ D +   E    G FDV+ +NPPYI S  +
Sbjct: 140 YASDISETAGDVTLLNAVKHGVEDRVLFLKGDLWEPFEAEGLGDFDVVAANPPYIPSGEI 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  +V+ ++PR++LDGG DGL  YR I  G  R L   G   +E G +Q   +  + +
Sbjct: 200 ENLPEDVK-YEPRVALDGGPDGLKFYRRIIAGAPRFLKPGGSIVLEFGKDQAGQIADLLK 258

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   KDY G +RV+
Sbjct: 259 RAGFGGIKILKDYAGLERVI 278


>gi|188589649|ref|YP_001919882.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E3 str. Alaska E43]
 gi|188499930|gb|ACD53066.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum E3 str. Alaska E43]
          Length = 288

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L +V       +I   +  +D          I +  +   +  IL   +F N
Sbjct: 26  SRLDAELLLGKVLNKEKIYLITHREEKIDKVNEEKYMKLISKRKEKMPVKYILNECEFMN 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LV+  L      I++ D  +I DL  G+GA+ ++L       
Sbjct: 86  MNFYVEPGVLIPRADTEILVEEVLK----NIDENDSKKICDLCCGSGAIGISLANLRKNI 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               +D      ++   N     + +R + ++SD  +   +    +D+IVSNPPYIE   
Sbjct: 142 NVDLIDYYEIPEKVTLINIKKYDILDRTNFIKSDLLNKSINDAKKYDIIVSNPPYIEECE 201

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V++++P  +L GG DGL  Y+ I +     LN+ G+ + EIGYNQ   V  + 
Sbjct: 202 INDLMDDVKNYEPHTALSGGRDGLDFYKRITEQSINVLNESGILAFEIGYNQGTAVKELM 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E +    V   KD  G DRV++ 
Sbjct: 262 EEKNFIEVKIVKDLAGLDRVVIG 284


>gi|78189388|ref|YP_379726.1| modification methylase HemK [Chlorobium chlorochromatii CaD3]
 gi|78171587|gb|ABB28683.1| Modification methylase HemK [Chlorobium chlorochromatii CaD3]
          Length = 297

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 8/264 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V   S  ++ +  D+ +   +     +   + L+   +  I G + FY     
Sbjct: 32  AERLLGHVLQKSRLELYLHHDAPISPSELEQFRSFCRQRLQGRPVQYITGEQYFYGAPFF 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETELLV+ AL  S       +V  +LD+GTG+G + + L   +P  + V 
Sbjct: 92  VDERVLIPRPETELLVERALEVSGVSALAGEVA-VLDVGTGSGCIAVTLATLAPNLRIVA 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIV 180
           VD+S  AL++A+ NA  +GV+ R   +Q+D  S           + +I+SNPPYI     
Sbjct: 151 VDLSPAALDVARLNAERHGVTNRMTFVQADMTSPYFAQQLPFATYQLIISNPPYIPKAEW 210

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRDF+P ++L     G+  Y+ +       L   G  ++E+  +    V  + E
Sbjct: 211 ATLEREVRDFEPELALTT-PSGMECYQALISAAPTLLADGGTLALELHADGARAVATMLE 269

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           S  L  V   KDYGG +R++   +
Sbjct: 270 SAGLQEVALMKDYGGFERIITARK 293


>gi|257467858|ref|ZP_05631954.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317062147|ref|ZP_07926632.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313687823|gb|EFS24658.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 372

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
              D+      +  ++   + ++ +  +++ ++  +   +    K  + +  +LG  +FY
Sbjct: 110 PKLDAEYIFAHILDVNRLTLTLNFNKKIEEEKKEKIREYLKLRGKNRKPLQYLLGEWEFY 169

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PR +TE+LV+         + + +  ++LD+GTG+GA+ ++L KE   
Sbjct: 170 GYPFKVDERVLIPRSDTEILVEQCKII----LNELEAPKVLDIGTGSGAIAISLGKECAH 225

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
               G DIS  ALE+AK+N   N + E    ++SD FSS  +  FD+IVSNPPYI     
Sbjct: 226 SDITGADISEGALEVAKANGELNKI-ENVKFIKSDVFSSFKDMKFDLIVSNPPYIPLEEY 284

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV +++P  +L    +G   Y  I+     +LN+ G  + E+GYNQ   V  + E
Sbjct: 285 NELMPEVLNYEPSSALTDNGNGYYFYSKISKEACDYLNEGGFLAFEVGYNQAEVVKELME 344

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                +++  KDYGG DRV++  +
Sbjct: 345 ENGFDVLSIVKDYGGIDRVVIGKK 368


>gi|229828876|ref|ZP_04454945.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM
           14600]
 gi|229792039|gb|EEP28153.1| hypothetical protein GCWU000342_00961 [Shuttleworthia satelles DSM
           14600]
          Length = 284

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 15/270 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L   +G     +I+     + D       + I R  +   + +I G + F  +
Sbjct: 10  ALDAGYLLEFASGRRHVDLILSDGEQMPDALLGKYRSCIERRAQRIPLQQITGSQAFMGL 69

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLP---------RIEKRDVVRILDLGTGTGAVCLA 114
              ++     PR +TE LV+  L              +      +R+LDL TG+G + ++
Sbjct: 70  DFMVNEHVLCPRQDTETLVEEGLTILASLQSGSVKNRQANADREIRLLDLCTGSGCILIS 129

Query: 115 LLKESPF----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           LL  +        G+  D+S +AL +A+ NA  NGVS  F  + SD F+ +EG FD+I +
Sbjct: 130 LLALARGQETPIHGLAADLSPEALAVARENAKRNGVSAAF--VLSDLFAEIEGSFDLITA 187

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  ++ L  EVRD +PR++LDG  DGL+ YR IA     +L + G   +EI ++
Sbjct: 188 NPPYIPSGQLEDLMPEVRDHEPRMALDGDEDGLAFYRRIAGQAPDYLREGGWLLMEIAFD 247

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           Q   V ++        +   +D  G DRVL
Sbjct: 248 QGQAVRQMLADGPFEEIEIIQDLSGRDRVL 277


>gi|319942225|ref|ZP_08016541.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
 gi|319804278|gb|EFW01170.1| N5-glutamine methyltransferase [Sutterella wadsworthensis 3_1_45B]
          Length = 276

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 13/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V G     +I   ++ L + Q       +        +  + G ++F+    
Sbjct: 25  EAMILLGFVIGKPREYLIAHDEAELTEDQILQFDMLVDMRAAGTPVPYLTGSQEFFGRHF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TE+LV+ AL      +      ++LDLGTG+G + + L  E    +  
Sbjct: 85  HVTDAVLIPRPDTEVLVEQAL------LVVAGNPKVLDLGTGSGCIGITLALEISGAQVT 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
             D S  ALEIA+ NA    ++ + +  +  W+ ++     FD+IVSNPPYI        
Sbjct: 139 ATDASEAALEIARGNAAE--LAAKVEFREGFWWDALVPNSQFDLIVSNPPYIRPDDDHLR 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            LE   ++P  +L  GI+GL   + IADG   HL   G   +E GY+Q  +V  + E   
Sbjct: 197 NLE---YEPLQALTDGINGLECLQAIADGAIAHLTPGGWLLLEHGYDQGAEVRAMLEQAG 253

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KDYGGNDRV +  R
Sbjct: 254 FAAVRTKKDYGGNDRVTMGRR 274


>gi|254482780|ref|ZP_05096017.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [marine gamma proteobacterium HTCC2148]
 gi|214036861|gb|EEB77531.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [marine gamma proteobacterium HTCC2148]
          Length = 277

 Score =  272 bits (697), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L          +   P++ +           + R  + E +  + G R+F++
Sbjct: 19  PARDAEILLGHCLDKPRSWLYTWPEAEVSGEALTCFQQLLQRRYRGEPVAYLTGHREFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRPETE LV+ AL   LP     D    LDLGTGTGA+ LAL  E P +
Sbjct: 79  LDLAVAPSTLIPRPETETLVEWALELPLP-----DDTVALDLGTGTGAIALALANEKPGW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +  G D++  A+++A +NA+ N ++ R + +QSDWF  VE   F+++VSNPPY+E     
Sbjct: 134 RVCGADVNIDAVQLASNNALANNLA-RVEFIQSDWFDGVEDKLFNLLVSNPPYVEEGDAH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I      +L   G   +E G++Q   V  +   
Sbjct: 193 LSEGDVR-FEPLEALVAADRGLADLDHIVKSSPNYLQTRGWLLLEHGFDQAPAVRELLVR 251

Query: 242 RKLFLVNAFKDYGGNDRVL 260
           R    V   +D  G +R+ 
Sbjct: 252 RGFKGVETRQDLAGQERIT 270


>gi|149925824|ref|ZP_01914088.1| modification methylase, HemK family protein [Limnobacter sp.
           MED105]
 gi|149825941|gb|EDM85149.1| modification methylase, HemK family protein [Limnobacter sp.
           MED105]
          Length = 307

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 121/266 (45%), Gaps = 7/266 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +    +  +TG     ++   +  L   Q     +   +  + E I  ++  ++FY+
Sbjct: 23  APSELRILMTHITGFDRVGLVTKGNRELPMDQLSAFKSLAAKRQQGEPIAYLVQQKEFYS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETE LV+ AL F   +  +  + R+LD+G G+GA+ ++L  E+P  
Sbjct: 83  RPFFVDPRVLIPRPETEELVEHALGFLQSKSTENLLTRVLDIGCGSGAIAVSLALENPIL 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    DIS  AL +A+ NA   G ++    LQSD F ++        FD+I SNPPYIE 
Sbjct: 143 EVTATDISADALWVAQFNANELG-AKNIRFLQSDLFENLLNQTPPLAFDLICSNPPYIEL 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P+ +L  G DGL  YR IA      L   G   VE G+ Q+  V  
Sbjct: 202 GDEHLSQGDLR-FEPQQALTDGGDGLHFYREIAQHSPSLLRAGGGVLVEHGHTQQEAVKA 260

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           +F       V    D  G  R +   
Sbjct: 261 LFSKAPYVDVQGLPDLAGTPRFVFAR 286


>gi|126739407|ref|ZP_01755100.1| modification methylase, HemK family protein [Roseobacter sp.
           SK209-2-6]
 gi|126719507|gb|EBA16216.1| modification methylase, HemK family protein [Roseobacter sp.
           SK209-2-6]
          Length = 287

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L+          I        +  ++G R+FY
Sbjct: 31  DPARDARILLAHAARIEASRVTLIAPEELEPEVAERYEQLISLRAIRVPVSHLIGEREFY 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++ALA        +   R+LDLG G+G + + LL E P 
Sbjct: 91  GRRFKVSGDVLDPRPETECLIEAALA--------QPFERVLDLGLGSGCILVTLLAEQPK 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G GVD+S  A   A +NAV + V ER D  QSDWFS+V G FD++VSNPPYI    + 
Sbjct: 143 ASGFGVDLSEAACLQASANAVLHRVEERIDIQQSDWFSNVTGQFDLVVSNPPYIALPEMQ 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA  V  HL   G   +EIG +Q  DV  +   
Sbjct: 203 DLSPEVRSHEPEMALTDGGDGLGAYRQIAASVREHLLPGGRLLLEIGPSQGRDVTALLAE 262

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  +    D  G DRV++  
Sbjct: 263 AGLLEIRVLPDLDGRDRVVVAQ 284


>gi|254492179|ref|ZP_05105353.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010]
 gi|224462504|gb|EEF78779.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010]
          Length = 278

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 84/259 (32%), Positives = 130/259 (50%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    LC V   +  ++ V P+  L+ +Q       + R  + E +  + G R F+++ L
Sbjct: 25  DVQILLCHVLDCTPTRLHVSPEHELEAQQWQLFNQLVERRKQGEPVAHLTGSRGFWSLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + + T  PRP+TELLV  AL+   P +       ++DLGTGTGA+ L+L  E      +
Sbjct: 85  LVDNSTLIPRPDTELLVSLALSKIKPNM------TVVDLGTGTGAIALSLAAEKADIDVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
             D S  AL++A+ NA  + + E+   +   W    +   FD++VSNPPYIE        
Sbjct: 139 ATDFSFAALQLAQKNANRHAL-EQVRFINMSWLVGFKSASFDLVVSNPPYIEMRDPHLNQ 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+P  +L  G DGL   R I    ++ L KDG   VE GY Q   V ++F     
Sbjct: 198 GDVR-FEPLSALVSGPDGLEDIRQIVVQAAKCLKKDGWLLVEHGYQQSAAVQQLFTDAGF 256

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             ++A +D+GG DR ++  
Sbjct: 257 EHISAHQDFGGQDRAVMGQ 275


>gi|51891212|ref|YP_073903.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum
           IAM 14863]
 gi|51854901|dbj|BAD39059.1| putative protoporphyrinogen oxidase [Symbiobacterium thermophilum
           IAM 14863]
          Length = 305

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 126/265 (47%), Gaps = 4/265 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A R++   L  V G  +  ++      L           + R    E +  ILG  +F 
Sbjct: 37  DAEREAAWLLAHVLGCRAGALVARRSEPLAPEASDEYAALVARRAAREPLQYILGTEEFM 96

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   ++     PR +T  LV+ A+A       E R V+R+ D+GTG+GA+ +A+    P
Sbjct: 97  GLTFRVTPAVLIPRLDTAALVEQAVARLTGGAAEARGVLRVADIGTGSGAIAVAVAHLLP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177
             + V VD+S +AL +A  NA  NGV++R    Q D  + +    G F  I+SNPPYI  
Sbjct: 157 HAQVVAVDLSPEALAVAAENARLNGVADRVRFRQGDLLAPLAEEGGRFAAILSNPPYIRE 216

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EVRD++PR++L  G DGL+ YR +A      L   G   VE+G  Q   V  
Sbjct: 217 DEIAGLMPEVRDWEPRLALVAGDDGLAFYRRLAREAPAFLEPGGFLGVEVGIGQAPAVAA 276

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLF 262
           +F    L  V   +D  G DR +L 
Sbjct: 277 LFREAGLKDVAVCRDTAGVDRAVLG 301


>gi|330951101|gb|EGH51361.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae Cit 7]
          Length = 277

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 80/250 (32%), Positives = 123/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +        +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIREGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|261378642|ref|ZP_05983215.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC
           14685]
 gi|269144979|gb|EEZ71397.1| protein-(glutamine-N5) methyltransferase [Neisseria cinerea ATCC
           14685]
          Length = 273

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 12/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G S  +++      + D  R      + R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQHAGGYSRIELVTRGGDEMPDSVRQHADMLVQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++A+          +   I DLGTG+GAV L +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAAIGRL------PECGSIWDLGTGSGAVALTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G +   +     WF      E  +DVIVSNPPYIE+  
Sbjct: 127 FVRASDISLSALETARKNAADLGAA--VEFAHGSWFDTDMPSERQWDVIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +     ++R F+P+ +L    DG+S  R +A+G  ++L   G   +E G+NQ   V  + 
Sbjct: 185 IHLSQGDLR-FEPKNALTDFSDGMSCIRALAEGAPKYLADGGFLLLEHGFNQGGAVRGVL 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
            +     V    D  G DRV   
Sbjct: 244 AAHGFTEVETLTDLAGLDRVTFG 266


>gi|240013153|ref|ZP_04720066.1| HemK [Neisseria gonorrhoeae DGI18]
 gi|240081797|ref|ZP_04726340.1| HemK [Neisseria gonorrhoeae FA19]
 gi|240114077|ref|ZP_04728567.1| HemK [Neisseria gonorrhoeae MS11]
 gi|240116887|ref|ZP_04730949.1| HemK [Neisseria gonorrhoeae PID1]
 gi|240120224|ref|ZP_04733186.1| HemK [Neisseria gonorrhoeae PID24-1]
 gi|240122522|ref|ZP_04735478.1| HemK [Neisseria gonorrhoeae PID332]
 gi|240126630|ref|ZP_04739516.1| HemK [Neisseria gonorrhoeae SK-92-679]
 gi|240127232|ref|ZP_04739893.1| HemK [Neisseria gonorrhoeae SK-93-1035]
 gi|260441507|ref|ZP_05795323.1| HemK [Neisseria gonorrhoeae DGI2]
          Length = 273

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVEILPDLAGLDRVTLG 266


>gi|56476055|ref|YP_157644.1| protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1]
 gi|56312098|emb|CAI06743.1| Protein-glutamine N-methyltransferase [Aromatoleum aromaticum EbN1]
          Length = 280

 Score =  272 bits (696), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D+   L  V   S+ ++   P++ L+  +     + + R    E +  + G R+F+ 
Sbjct: 22  AVVDARILLRHVLQCSAARLAAYPEARLEAPEWAEFRSLVERREAGEPVAYLTGEREFFG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ ALA        +   R+LDLGTG+GA+ ++L  E P  
Sbjct: 82  HPFIVTPAVLIPRPDTELLVELALA----HFGDKPHTRVLDLGTGSGALAISLALELPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V VD S +AL +A +NA     S     +  DWFSS+ +  + +IV+NPPYI +    
Sbjct: 138 DVVAVDRSREALWVAMANAARLRAS--ISFVLGDWFSSLGDDHYQLIVANPPYIAAADPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL     IA    RHL   G   +E G++Q   V  +   
Sbjct: 196 LDEGDVR-FEPSTALVAGPDGLDDLAAIAAQAPRHLEPGGWLFMEHGFDQAAAVRGLLTD 254

Query: 242 RKLFLVNAFKDYGGNDRV 259
                + ++KD  G +RV
Sbjct: 255 GGFSSIASWKDLAGIERV 272


>gi|237740337|ref|ZP_04570818.1| methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422354|gb|EEO37401.1| methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 369

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
           AL D+         +S + +       + +  +  +   ++   K  + +  ILG  +FY
Sbjct: 91  ALVDTEYIFSEALKVSRNTLKYSMSREIKEEDKNKIREMLMLRAKSRKPLQYILGEWEFY 150

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRP+TE+LV+  +      + + +   ILD+G+G+GA+ +A+  E   
Sbjct: 151 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 206

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+  A+ +A  N V N V E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 207 SSVTGLDINEDAIRLANENKVLNKV-ENVNFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 265

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++F+P+ +L    DGL  YR I+     +L   G  + EIGY Q  +V +I 
Sbjct: 266 YETLMPEVKNFEPKNALTDLGDGLHFYREISKKAESYLKDTGYLAFEIGYKQAKEVSKIL 325

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E     +++  KDYGGNDRV+L  +
Sbjct: 326 EDNNFAILSVVKDYGGNDRVVLAKK 350



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 3/47 (6%), Positives = 18/47 (38%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49
             ++   +  V  L    + +  +  L + ++  +   + + ++ +
Sbjct: 9  PRLEAEKLVSYVLNLDRIALYIHYERELTEEEKTSIKQFLKQMVEEK 55


>gi|114330835|ref|YP_747057.1| modification methylase, HemK family protein [Nitrosomonas eutropha
           C91]
 gi|114307849|gb|ABI59092.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosomonas eutropha C91]
          Length = 293

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 7/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  + +  +I   + +L   Q       + R +  E +  + G R FY++  
Sbjct: 35  DARWLLQSVLNVDAAFLITHAELLLGMEQIVHFQQLLARRMAGEPVAYLTGERGFYDLVF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV+ AL     +I       ILDLGTG+GA+ + + +  P     
Sbjct: 95  DVTPDVLIPRPETELLVEMAL----SKIPPDRCCNILDLGTGSGAIAITIARHRPDIYVT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL +A+ NA    V E    +++DWFS  +   FDVIV+NPPYI       L 
Sbjct: 151 AVDLSPLALAVARRNAKRCSV-ENVVFIKADWFSGFISEKFDVIVANPPYIVEGDPH-LE 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +   F+P I+L    +GL   R I D    +L   G   +E GY+Q     R+ +    
Sbjct: 209 ADGLRFEPTIALVAQNNGLDCIRRIVDQAPDYLEHSGWLMLEHGYDQADVCRRLLDKTGF 268

Query: 245 FLVNAFKDYGGNDRVL 260
             +    D  G DRV 
Sbjct: 269 SHIFTRSDLAGIDRVT 284


>gi|313203843|ref|YP_004042500.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific
           [Paludibacter propionicigenes WB4]
 gi|312443159|gb|ADQ79515.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paludibacter propionicigenes WB4]
          Length = 282

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 118/255 (46%), Gaps = 5/255 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S+  + ++TG S  ++IV+ +++  D Q   +   I +  K+  I  ILG  +F+ +   
Sbjct: 25  SYLIIEKLTGFSRTEIIVNKNTLFSDEQHHVIETFIEKLKKNVPIQYILGETEFFGLTFN 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+           +   + ILD+GTG+G + ++L  E P      
Sbjct: 85  VNESVLIPRPETEELVEWI----RSENNRSADLNILDIGTGSGCIAISLKHEFPNASVHA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS +AL  A+SN   N +   F           E  +D+IVSNPPY+       +   
Sbjct: 141 FDISEQALNTARSNVERNKLDVTFSRTNILNAPKTEQRWDIIVSNPPYVTEQEKSSILPN 200

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V + +P ++L     D L  YR+IA     HL   G    EI  +  V+ V +       
Sbjct: 201 VLEHEPHLALFVPDNDPLLFYRSIALFAKHHLKPQGKLYFEINRSFGVETVELLTDLGFC 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GNDR++
Sbjct: 261 NVELRKDISGNDRMV 275


>gi|302342175|ref|YP_003806704.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfarculus baarsii DSM 2075]
 gi|301638788|gb|ADK84110.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfarculus baarsii DSM 2075]
          Length = 291

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V GL    + +D D  L   +       ++R   HE +  I G R+F+ + L 
Sbjct: 30  AELLLSQVLGLERIGLYLDFDRPLTKDELAGFKALLLRRRAHEPVAYIRGKREFFGLELA 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETELLV+  +A     + + +  +ILDL TG GAV LAL  + P  + + 
Sbjct: 90  VGPGVLIPRPETELLVERGVAL----LAQAERPKILDLCTGGGAVALALASQLPTARVLA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCL 183
            DIS +AL  A+ NA   G+ ER   LQ   +  V    G FD+I +NPPY+ S    CL
Sbjct: 146 CDISAQALAYARQNAQALGLEERVSFLQGPLWEPVAATGGFFDLITANPPYVTSGEWPCL 205

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +VRD +PR++L+ G +GL     I  G    L       VEIG  Q   V+ + ++  
Sbjct: 206 PPDVRDHEPRLALEAGPEGLDVIGPIIVGSRAFLRPLAWLLVEIGAGQGPAVMALAQAAG 265

Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264
               +   +D  G DRVL   R
Sbjct: 266 IFSRIELLRDLAGMDRVLACER 287


>gi|34763569|ref|ZP_00144504.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|27886758|gb|EAA23896.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
          Length = 370

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  +S + +       + +  +  +    ++R+ K + +  ILG  +FY
Sbjct: 91  PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 150

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E   
Sbjct: 151 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 206

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N + E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 207 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 265

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +I 
Sbjct: 266 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 325

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGNDRV++  +
Sbjct: 326 QNNNFDILSVIKDYGGNDRVVIAKK 350



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 18/45 (40%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  + + + + ++
Sbjct: 9  PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 53


>gi|118445015|ref|YP_879015.1| methyltransferase [Clostridium novyi NT]
 gi|118135471|gb|ABK62515.1| Methyltransferase [Clostridium novyi NT]
          Length = 284

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 7/262 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I++ + +L   +       I        +  ILG  +F  +
Sbjct: 23  MLDAQLLLQKVLKKDKLFIILNRNEILSKDEEEEFLKLINLRKDKMPVKYILGECEFMGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE+LV+  +      I++ +  RI D+  G+GA+ +++ K      
Sbjct: 83  NFYVKEGVLIPRADTEILVEEVIK----EIKENNYNRICDVCCGSGAIGVSIGKYMENST 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180
               DIS  A+E+   N     + +R    +SD  +        FDVIVSNPPYI+  ++
Sbjct: 139 VDCYDISDIAIEVTGKNIERFLLKDRLTVEKSDLLTVAIKQNKKFDVIVSNPPYIKEEVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+D++P I+L GGIDGL  YR I       L  +GL + EIGY+Q   V  +  
Sbjct: 199 PTLMEDVKDYEPYIALCGGIDGLDFYRKITVQSLEILENNGLLAFEIGYDQAEAVKELLM 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                 V    D  G +RV++ 
Sbjct: 259 ESGFTDVKVINDLEGLNRVVIG 280


>gi|320109110|ref|YP_004184700.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Terriglobus saanensis SP1PR4]
 gi|319927631|gb|ADV84706.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Terriglobus saanensis SP1PR4]
          Length = 286

 Score =  271 bits (695), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 8/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+RDSH  L    G+S  Q++  P+ +L  RQ     + +   L+   I  + G ++FY 
Sbjct: 30  AVRDSHLLLQHALGVSREQIMAWPERMLTPRQSAAFEHLVSERLRAVPIQYLRGQQEFYG 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRPETEL++D    +    I+   +V I D+G+G+GA+ + L  E    
Sbjct: 90  RNFLVTPDVLIPRPETELIIDEVKRY----IDPSALVMIADIGSGSGAIGVTLAAEFEMA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +    D+S  AL + + NA+ + VS+R  T +SD FS++    FD +VSNPPYI +   D
Sbjct: 146 RITAADLSPAALAVTEQNAIRHHVSDRVRTFESDLFSALGERIFDYVVSNPPYIAASERD 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VRD +P ++L GG DG   Y  +     +HL   G+  +EIG      +    ++
Sbjct: 206 SLHPQVRDHEPELALYGGEDGFEIYTRLIPQAWKHLRPGGMLFLEIGKP-GQALSANLKA 264

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   KD  G  R+++  +
Sbjct: 265 --WSDVYTVKDLQGLPRLIVARK 285


>gi|66044203|ref|YP_234044.1| modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
 gi|63254910|gb|AAY36006.1| Modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
          Length = 277

 Score =  271 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|302384869|ref|YP_003820691.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium saccharolyticum WM1]
 gi|302195497|gb|ADL03068.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium saccharolyticum WM1]
          Length = 288

 Score =  271 bits (695), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 12/270 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIHRILG 56
           +A  DS   L           ++D +  L +            + I +      +H+I G
Sbjct: 23  EASLDSRYLLLEAFHTDMTHFLLDRNKRLPEEDSILESLSVYRSMIGKRSLRIPLHQITG 82

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            R+F  +   ++     PR +TE LV+  L        K  + +ILDL TG+G + ++L 
Sbjct: 83  SREFMGLDFEVNEHVLIPRQDTETLVELVLKDY-----KGKMPKILDLCTGSGCIAISLA 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPY 174
           K   F +    DIS +AL +A+ NA  +    R   ++SD F + +    FDVIVSNPPY
Sbjct: 138 KLGGFDRVTAADISEEALLVAERNAGKHLGEGRITLVKSDLFEAFKNQRTFDVIVSNPPY 197

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I + I++ L  EVRD +P ++LDG  DGL  YR +A     H+   G    EIGY+Q   
Sbjct: 198 IPTKIIEGLQPEVRDHEPMLALDGKEDGLYFYRILALESRSHMVLGGAVYFEIGYDQGEA 257

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V  + +      +    D  G DRV+   +
Sbjct: 258 VSGLLKDAGFGQIRVVPDAAGLDRVVCARK 287


>gi|114768931|ref|ZP_01446557.1| HemK [alpha proteobacterium HTCC2255]
 gi|114549848|gb|EAU52729.1| HemK [alpha proteobacterium HTCC2255]
          Length = 277

 Score =  271 bits (694), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 9/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A R++   L     L     I+  D  + D    +    I + L+ + I +I+G R F+
Sbjct: 22  NAKREAKILLEFTLNLKGK--ILQLDHEISDDIYNYFKTLINKRLEFQPISQIIGERYFW 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  +S +  +PRP+TE L++  L        +     ILDLGTG+G + L+LL E   
Sbjct: 80  KNKFIVSPNVLDPRPDTETLIEHTL-------SQGKFYNILDLGTGSGCIILSLLDEYKD 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG+D S  AL +AK NA    +S+R      +W   ++  FD+I+SNPPYI    + 
Sbjct: 133 AIGVGIDKSEDALNVAKQNANLLSLSQRVSFNLGNWCEGIKEKFDLIISNPPYISENDMK 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V +++PRI+L    DGL  YR I DG    L  +G   +EIGY+Q   V  + ++
Sbjct: 193 ILSKSVLNWEPRIALTPEGDGLGAYRHILDGAKNLLIPNGKLILEIGYDQGKKVTHLLKN 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +   KD    DRVL
Sbjct: 253 HGYKDIKLVKDINNKDRVL 271


>gi|262068282|ref|ZP_06027894.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378020|gb|EFE85538.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 382

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
            L D+         +S + +       + +  +  +   ++   K  + +  ILG  +FY
Sbjct: 104 PLVDTEYIFSEALKVSRNTLKYSMSREIKEEDKDKIREMLMLRAKSRKPLQYILGEWEFY 163

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +  +   PRP+TE+LV+  +      + + +   ILD+G+G+GA+ +A+  E   
Sbjct: 164 GLPFKVRENVLIPRPDTEILVEQCI----QLMREIEEPNILDIGSGSGAISIAIANELKS 219

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               GVDI+ +A+++A  N + N V E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 220 SSVTGVDINEEAIKLANENKILNKV-ENINFMKSDLFEKLDEDFKYDLIVSNPPYITKEE 278

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++F+P+ +L    DGL  YR I+     +L + G  + EIGY Q  DV +I 
Sbjct: 279 YESLMPEVKNFEPKNALTDLGDGLHFYREISKKAGSYLKESGYLAFEIGYKQAKDVSKIL 338

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E     +++  KDYGGN+RV+L  +
Sbjct: 339 EDNGFAILSVVKDYGGNNRVVLAKK 363



 Score = 39.3 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 4/47 (8%), Positives = 18/47 (38%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE 49
             +S   +  V  L    + +  +  L + ++  +   + + ++ +
Sbjct: 22 PRLESEKLVSYVLNLDRIALYIHYERELTEEEKSSIKQFLKQMVEEK 68


>gi|268595711|ref|ZP_06129878.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268549100|gb|EEZ44518.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|317165196|gb|ADV08737.1| HemK [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 295

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 38  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 98  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 151

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 152 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 209

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 210 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 268

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 269 GFSGVEILPDLVGLDRVTLG 288


>gi|15966363|ref|NP_386716.1| putative methyltransferase protein [Sinorhizobium meliloti 1021]
 gi|307313050|ref|ZP_07592677.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti BL225C]
 gi|307321057|ref|ZP_07600463.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti AK83]
 gi|15075634|emb|CAC47189.1| Putative methyltransferase [Sinorhizobium meliloti 1021]
 gi|306893332|gb|EFN24112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti AK83]
 gi|306899369|gb|EFN30003.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sinorhizobium meliloti BL225C]
          Length = 293

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 116/261 (44%), Positives = 161/261 (61%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  +  L+   ++      + D     +  A+ R   HE ++RILG R+F+ 
Sbjct: 24  AGLDARHLISGLLDLALAALLTRGREPISDEDAARIRAAVERRAAHEPVYRILGEREFFG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L LS +T EPRP+TE+LVD  +  +      +   RI+DLGTGTGA+CLALL      
Sbjct: 84  LKLKLSKETLEPRPDTEILVDCLIPHARRIASSKGSCRIVDLGTGTGAICLALLAAVLDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G DIS  AL  A  NA  NG++ERF T++S WF +V+G FD+IVSNPPYI S ++  
Sbjct: 144 RGLGTDISEDALATALENARRNGLAERFGTVRSKWFEAVDGRFDIIVSNPPYIRSNVIPE 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR  DP  +LDGG DGL  YR IA    RHL  DG+  +EIG++QK  V  +FE++
Sbjct: 204 LEPEVRYHDPVAALDGGEDGLDAYRAIASHAGRHLETDGVIGLEIGFDQKRAVTALFEAQ 263

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
              L++A KD GGNDRVL+F 
Sbjct: 264 GFRLLSAAKDLGGNDRVLVFQ 284


>gi|226315062|ref|YP_002774958.1| hypothetical protein BBR47_54770 [Brevibacillus brevis NBRC 100599]
 gi|226098012|dbj|BAH46454.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 296

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 6/267 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             L ++   +         + ++     +D      L    VR   +E +  + G ++FY
Sbjct: 31  DPLFEAELMIRHCLDWDRTRFLMAMPDSIDAETLVKLDGLCVRRANNEPLQYMFGEQEFY 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               T+      PRPETE+LV+  +A +     + + + ++D+GTG+GA+C+ L  E P 
Sbjct: 91  GRPFTVRPGVLIPRPETEILVEQVMAAATMLWPESEELAVVDIGTGSGAICITLALEKPQ 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
           ++   VD+S +A  IA+ NA   G   RF  LQ D    +       DV+VSNPPYI S 
Sbjct: 151 WRVTTVDLSLEATAIARENASRLGADVRF--LQGDLVQPLLEAGEKVDVLVSNPPYIPSR 208

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V+ L  EVR  +PR++LDGG DGL  YR + + +   L    + + E+G  Q  DV  +
Sbjct: 209 DVEELDDEVRVHEPRLALDGGEDGLDCYRRLCEALPNLLKDRAVVAFEVGIYQARDVAAL 268

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +   +  V    D  G +RV++  R
Sbjct: 269 MRASGVMDEVEIVPDLAGIERVVIGVR 295


>gi|160876840|ref|YP_001556156.1| HemK family modification methylase [Shewanella baltica OS195]
 gi|217974699|ref|YP_002359450.1| HemK family modification methylase [Shewanella baltica OS223]
 gi|304410656|ref|ZP_07392274.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS183]
 gi|307304753|ref|ZP_07584503.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica BA175]
 gi|160862362|gb|ABX50896.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS195]
 gi|217499834|gb|ACK48027.1| modification methylase, HemK family [Shewanella baltica OS223]
 gi|304351140|gb|EFM15540.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS183]
 gi|306912155|gb|EFN42579.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica BA175]
 gi|315269043|gb|ADT95896.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella baltica OS678]
          Length = 282

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      S   +   P+  L   Q       + +  K   +  I+G R+F++
Sbjct: 25  AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL   L         ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETALNMPLSTY-----AKVLDLGTGTGAIALALASERESW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A +N     +  + D LQSDWFS+V+   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA+    +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278


>gi|126665162|ref|ZP_01736145.1| Modification methylase HemK [Marinobacter sp. ELB17]
 gi|126630532|gb|EBA01147.1| Modification methylase HemK [Marinobacter sp. ELB17]
          Length = 314

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 87/286 (30%), Positives = 131/286 (45%), Gaps = 33/286 (11%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L +VTG S  +    P+  +   Q       + +    E +  +LGW++F++
Sbjct: 35  PQLDAELLLVQVTGWSRTRFRAFPEQHVSLVQAAAFEQLVDKRAAGEPVAYVLGWQEFWS 94

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PRP+TE +V+ AL   LP        R+LDLGTGTGA+ LAL  E P +
Sbjct: 95  LPLQVSAATLIPRPDTECVVEQALTLDLPA-----QARVLDLGTGTGAIALALASERPDW 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--------------------- 161
                D    A+ +A+SNA    +  +   ++S WF  +                     
Sbjct: 150 DITASDFVDAAVALAQSNAAALNLPIQV--VKSHWFDQLTAVCFDQRLDESGDPRRDLRG 207

Query: 162 ----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
               +  FD+IVSNPPYI +        +VR F+P  +L  G DGL   R I       L
Sbjct: 208 DLNRDQGFDLIVSNPPYIANTDHHLSEGDVR-FEPASALVSGADGLDDIRHIVAAAPSWL 266

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           N  G   +E GY+Q   V  +   +    V++ +DYG NDR+ L  
Sbjct: 267 NAGGWLLLEHGYDQAQAVQGLLHQQGFDQVHSRQDYGRNDRMTLGQ 312


>gi|330975578|gb|EGH75644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 277

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|330828703|ref|YP_004391655.1| protein-(glutamine-N5) methyltransferase [Aeromonas veronii B565]
 gi|328803839|gb|AEB49038.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Aeromonas veronii B565]
          Length = 283

 Score =  271 bits (694), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 87/267 (32%), Positives = 125/267 (46%), Gaps = 15/267 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC + G     ++  P+  LD  Q+  L   + R L  E I  ++G R+F++
Sbjct: 20  PRADADVLLCHLLGCRRSYLMTWPEHELDAAQQATLQGWLARRLNGEPIAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE+LV+ AL         +    +LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLKVSPATLIPRPDTEVLVEQALTRI-----PQGPCAVLDLGTGTGAIALALKSERPEI 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYI 175
               VD    A  +A+ N+V  G+    +     WF  +          F VIVSNPPYI
Sbjct: 135 DVWAVDRMADAAALARENSVALGLP--IEVRDGSWFEPLGEPDRDETPRFAVIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +         +VR F+PR +L     GL+  R I      +L  DG   +E G++Q   V
Sbjct: 193 DGADPHLEQGDVR-FEPRSALVADDAGLADIRHIVAHAPAYLLADGWLLLEHGWDQGEAV 251

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLF 262
            ++        V   +DYG NDRV L 
Sbjct: 252 RQLLRDGGYREVATVRDYGDNDRVTLG 278


>gi|306844841|ref|ZP_07477424.1| glutamine-N5 methyltransferase, release factor-specific [Brucella
           sp. BO1]
 gi|306274773|gb|EFM56554.1| glutamine-N5 methyltransferase, release factor-specific [Brucella
           sp. BO1]
          Length = 295

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 150/258 (58%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   ++  P+ ++   +   L  A+ R    E +HRI+G R+FY + 
Sbjct: 30  LDARLLIEWATGATCLDLVSQPEKLIGSAEAEKLRAALERRAGGEPVHRIMGQREFYGLP 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE LV+  +      I +     +LD+GTGTGA+ ++LL       G
Sbjct: 90  FRLSAQTLEPRPDTEALVELVIPVLEQIIARHGTAEVLDMGTGTGAIIISLLHRFEHMHG 149

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD++  AL  A+ NA+ NGV ERF  L+SDWFS+V G F +IVSNPPYI    +  L 
Sbjct: 150 IGVDVAEGALATARINAIDNGVGERFAGLKSDWFSNVSGKFHLIVSNPPYIPHAEIAGLS 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL  Y+ +A GV  +L KDG+ +VEIG  Q  DV  +F+S   
Sbjct: 210 REVREHDPLAALDGGPDGLDFYKALAQGVGAYLYKDGMVAVEIGAGQFQDVEALFKSTGF 269

Query: 245 FLVNAFKDYGGNDRVLLF 262
            L     D GG+ R +LF
Sbjct: 270 SLAGEANDLGGHRRAMLF 287


>gi|312958851|ref|ZP_07773370.1| modification methylase [Pseudomonas fluorescens WH6]
 gi|311286621|gb|EFQ65183.1| modification methylase [Pseudomonas fluorescens WH6]
          Length = 276

 Score =  271 bits (693), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 8/250 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPEKIVSSEDALTFAGYLQRRRAGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLVD+AL      +      R+LDLGTG+GA+ LAL  E P +    VD   +A+ 
Sbjct: 92  PDTELLVDAALE-----LLPATPTRVLDLGTGSGAIALALASERPAWHVTAVDRVLEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +      L S WFS+++G  +D+I+SNPPYI       +  +VR F+P  
Sbjct: 147 LAERNRQRLHL-HNAMVLNSHWFSALQGHRYDLIISNPPYIAENDPHLVAGDVR-FEPAS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I +    HLN  G   +E GY+Q   V  +  ++    V++  D G
Sbjct: 205 ALVAGRDGLDDLRLIINEAPAHLNAGGWLLLEHGYDQAEAVRDLLLTQGFEDVHSRIDLG 264

Query: 255 GNDRVLLFCR 264
           G++R+ L  R
Sbjct: 265 GHERITLGRR 274


>gi|303230838|ref|ZP_07317585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-049-V-Sch6]
 gi|302514598|gb|EFL56593.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Veillonella atypica ACS-049-V-Sch6]
          Length = 289

 Score =  271 bits (693), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 86/265 (32%), Positives = 130/265 (49%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G +   +  + D  L+  +       ++   K  S+  + G +DF  
Sbjct: 27  PRLDGEVLLSHVLGKNRIYLYTNYDQPLEQEELDRFRPLVIERAKGHSVASLTGTKDFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRP+TE LV+  L        ++D +RILD+ TG G + L+LL   P  
Sbjct: 87  LTFAVNDKVLIPRPDTETLVEYVL----SSYHQQDSIRILDMCTGPGTILLSLLHYLPTA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
            G+G+DIS  ALEIA  N     +  R +  +SD FS +E    LFDVIVSNPPYI    
Sbjct: 143 TGMGLDISRDALEIATKNQEAFKLENRSEFHESDMFSYLEHHNELFDVIVSNPPYIRLED 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  +V + +P I+L GG DGL  YR +A    ++L   GL + E+GY+Q  DV  + 
Sbjct: 203 KEILSPDVLN-EPHIALFGGEDGLDFYRHLAMECVKYLKPYGLVAFEVGYDQAEDVKSLL 261

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLFC 263
           E+      ++   D    +RV+   
Sbjct: 262 EAVGSYVDISFAADLASINRVVKAR 286


>gi|330972815|gb|EGH72881.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 277

 Score =  271 bits (693), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  +   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANDRQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|150015293|ref|YP_001307547.1| HemK family modification methylase [Clostridium beijerinckii NCIMB
           8052]
 gi|149901758|gb|ABR32591.1| modification methylase, HemK family [Clostridium beijerinckii NCIMB
           8052]
          Length = 586

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +       +I   +  +         + I +      +  IL   +F  
Sbjct: 325 ARLDAELLLGNIIEKDRVYLITHKEDEVSKEDAEKYFDLIEKRRNKMPVKYILNKCEFMG 384

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PR +TE+LVD  L      IE+   ++I DL +G+GAV ++L       
Sbjct: 385 IEFYVEEGVLIPRGDTEILVDEVLKI----IEENQEMQICDLCSGSGAVGISLAHFRQNI 440

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVI 179
           K   +D      +++  N   N + +R   ++SD          ++D+IVSNPPYIE   
Sbjct: 441 KVDLIDYYPIPEKVSLINIEKNKLEDRVFFIKSDLLEESIKNNKIYDIIVSNPPYIEECE 500

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  +V++++P  +L+GG DGL  YR I D     L + G+ + EIGYNQ   V  + 
Sbjct: 501 IGKLMEDVKNYEPHTALNGGNDGLDFYRKIIDQSQYTLRESGILAFEIGYNQGEAVKLLM 560

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E+     V   KD+   DRV++  +
Sbjct: 561 ENNGFTNVKIVKDFASLDRVVVGIK 585


>gi|89900073|ref|YP_522544.1| HemK family modification methylase [Rhodoferax ferrireducens T118]
 gi|89344810|gb|ABD69013.1| modification methylase, HemK family [Rhodoferax ferrireducens T118]
          Length = 280

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 4   LRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             D+   L    G S      ++      L    +  L   + R    E +  I G ++F
Sbjct: 18  RLDAQLLLLHALGKSAQERAWLLAHDTDELPPSAQATLDAWVQRRAASEPLAYITGHQEF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L + +    PRP+TE LV+ AL     +        +LDLGTG+GA+ LAL    P
Sbjct: 78  FGLDLAVDARVLVPRPDTETLVEWALDVL--QAPTGTAPAVLDLGTGSGAIALALKATRP 135

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
             +   VD S  AL +A++NA   G++ +F   Q  W + +   +  FD IVSNPPY+ +
Sbjct: 136 ELRVSAVDYSADALAVARANAQRLGLAVQFS--QGAWLAGLAQPDARFDAIVSNPPYVAA 193

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +   F+P  +L  G DGL   R I      HLN  G   +E GY+Q   V  
Sbjct: 194 QDKHL---DALTFEPLQALASGADGLDDIRQIITQAPAHLNPGGWLLLEHGYDQAAAVRA 250

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +     L  V + +D  G +R 
Sbjct: 251 LLLDAGLHDVQSRRDLSGIERC 272


>gi|293609439|ref|ZP_06691741.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827891|gb|EFF86254.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 271

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGTGA+ LAL  E P ++   +D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLP-----NTANIVDLGTGTGAIALALASERPDWQVTAID 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA  + +  R       WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLEVAKENAQAHDLQ-RVKFACGAWFDALEPQKFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRDIFTEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
              +DYG NDRV L C
Sbjct: 254 KTIQDYGQNDRVTLAC 269


>gi|157962942|ref|YP_001502976.1| HemK family modification methylase [Shewanella pealeana ATCC
           700345]
 gi|157847942|gb|ABV88441.1| modification methylase, HemK family [Shewanella pealeana ATCC
           700345]
          Length = 280

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V       +   PD  L+  Q F     + + L+   I  I+G R+F++
Sbjct: 23  ASLDAEVMLLHVINKQRSYLYTWPDRSLEPEQVFEFKQMLAKRLRGNPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFRVNPTTLIPRPDTEILVETAL-----NLPLAESAKVLDLGTGTGAIALSLAHERSEW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +D    A+ +AK N  TN   E+ D  QSDWF +VE   F++IVSNPPYI+     
Sbjct: 138 QVCAIDKVDDAVALAKEN-RTNLKLEQVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    IA+    +L   G   +E GY Q +++      
Sbjct: 197 LSQGDVR-FEPASALTAPQRGFADLFYIAESARDYLAPGGYLLLEHGYQQAIELREKLIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277


>gi|330899754|gb|EGH31173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 277

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFASAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|329929004|ref|ZP_08282806.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. HGF5]
 gi|328936993|gb|EGG33422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus sp. HGF5]
          Length = 296

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 130/265 (49%), Gaps = 5/265 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+  R++   L  V GLS     +       + +R  L  AI R  +      I+G ++F
Sbjct: 31  MEPQRNAQLLLEHVLGLSGTSYYMALTDPFPEGRRLALEEAITRKAEGVPAQYIIGEQEF 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKES 119
           Y     ++     PRPETELLV++ L +      + D  ++++D+GTG+GA+ + L  +S
Sbjct: 91  YGRPFDVTPAVLIPRPETELLVEAVLKYGQELTPRPDGGLKVVDIGTGSGAIAITLALQS 150

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
             +     DIS  ALE+A  NA   G   R +  Q +      G+  D++VSNPPYI + 
Sbjct: 151 KGWDVFASDISSDALEVAARNAKKLGA--RVEFRQGNLLEPFAGMGPDILVSNPPYIPAE 208

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  EVRD++PR +LDGG DGL+ YR +   +S       L + E+G  Q  DV  +
Sbjct: 209 DIEELQPEVRDYEPRTALDGGPDGLNPYRIMMAQLSLLSAPPRLIAFELGMGQAGDVAEL 268

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262
                    +    D  G DR +L 
Sbjct: 269 LRKAGHWEEIVTVPDLAGIDRHVLG 293


>gi|90407673|ref|ZP_01215853.1| Methylase of polypeptide chain release factor [Psychromonas sp.
           CNPT3]
 gi|90311264|gb|EAS39369.1| Methylase of polypeptide chain release factor [Psychromonas sp.
           CNPT3]
          Length = 277

 Score =  271 bits (693), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   LC V    S  ++  P+ +L D Q+      I   +K   +  + G R+F++
Sbjct: 20  ALLDAQVLLCFVLQKESVYLMTWPERLLTDMQKEAYKALIDERIKGVPVAYLTGTREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +++ T  PR +TE LV+ AL    P         ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPFKVNASTLIPRADTETLVEYALQVCSPN------SHILDLGTGTGAIILALASELPHA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD +  A+++A  N     + +  +  QSDWFS V G FD+IVSNPPYI+      
Sbjct: 134 QCSAVDFNADAVQLAIENRQALKL-DNVNIYQSDWFSQVHGRFDLIVSNPPYIDKEDHHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+    I      +L  +G   +E G+ Q   V  IF   
Sbjct: 193 AEGDVR-FEPLSALVADDKGLADIHLIVSQARLYLKTNGTLMIEHGFEQGEAVRNIFRLF 251

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
           +   +    D   N+R+ + 
Sbjct: 252 EFDEIRTECDLARNERISIA 271


>gi|83591212|ref|YP_431221.1| HemK family modification methylase [Moorella thermoacetica ATCC
           39073]
 gi|83574126|gb|ABC20678.1| [protein release factor]-glutamine N5-methyltransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 283

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L     L+  +++   +  L          AI R      +  + G ++F 
Sbjct: 21  RPRLEAEVLLGWACSLTRPRLLARLEEELAPAAAGRFWQAIDRRAAGYPLQYLTGHQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++     PR +TE++V++ L     R++  +   I D GTG+GA+ L+L    P 
Sbjct: 81  SLDFKVTPAVLIPRQDTEVVVEAVLE----RLDPCESYTIADCGTGSGAIALSLAHYLPR 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +    DIS  AL +A+ NA   G++ R   LQ D+ + + G   D +V+NPPYI +  +
Sbjct: 137 ARVYATDISPAALTVAQENARKLGLAARVTLLQGDFLAPLRGLKLDALVANPPYIPTAAL 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +VR  +PR++LDGG DGL  YR +  G +  L   GL ++EIG +Q   V  +  
Sbjct: 197 PGLPADVRS-EPRLALDGGPDGLDAYRFLLPGAAGLLRPGGLLALEIGSDQGQAVKDLAR 255

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +           DY G DR  L  R
Sbjct: 256 AVGAYRNEQVLPDYAGRDRCFLAYR 280


>gi|168185913|ref|ZP_02620548.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum C str. Eklund]
 gi|169296020|gb|EDS78153.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum C str. Eklund]
          Length = 292

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L +V       +I++    + +  +      I        +  ILG  +F  +
Sbjct: 23  MLDAQLLLQKVLKKDKLFIILNRSETISNNDKEEFIKLINLRKDKMPVKYILGECEFMGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
             T+      PR +TE+LV+  +      I+     +I D+  G+GA+ +++ K      
Sbjct: 83  NFTIKEGVLIPRADTEILVEEVIK----EIKNNGYTKICDVCCGSGAIGVSIGKYIENSI 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180
               DIS  A+E+   N     + +R    +SD  +        F++IVSNPPYI+  ++
Sbjct: 139 VDCYDISDIAIEVTNKNINRFLLEDRVKVRKSDLLTVAKEENKKFNIIVSNPPYIKEKVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+ F+P I+L GG DGL  Y+ I +   + L +DGL + EIGY+Q  +V  +  
Sbjct: 199 PTLMDDVKKFEPYIALCGGADGLDFYKKIINQSLQLLEEDGLLAFEIGYDQGEEVKELLI 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                 V    D  G +RV + 
Sbjct: 259 KNGFSCVRVINDLAGLNRVAIG 280


>gi|113971502|ref|YP_735295.1| HemK family modification methylase [Shewanella sp. MR-4]
 gi|113886186|gb|ABI40238.1| modification methylase, HemK family [Shewanella sp. MR-4]
          Length = 286

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+  FL      S   +   P+  L   Q       + R  +   +  I+G R+F++
Sbjct: 25  AHLDAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +AK+N  TN   E+ + LQSDWFS+++   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278


>gi|196229475|ref|ZP_03128340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chthoniobacter flavus Ellin428]
 gi|196226707|gb|EDY21212.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chthoniobacter flavus Ellin428]
          Length = 275

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 118/256 (46%), Gaps = 10/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  V G    ++ ++ D  L + +   L   + R    E +  +LG  +F+      
Sbjct: 28  EHLLAHVLGKKRMELYLEFDRPLSEPELEPLRALVKRRAAGEPLQHLLGTAEFHGRSFLC 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PRPETE L +  LA            R+LD+GTG+G + L L    P  +   V
Sbjct: 88  DKRGLVPRPETEQLCELVLA-------GGAAKRVLDIGTGSGVIALTLATAWPEAQVEAV 140

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S  AL +A+ NA    ++ R   L SD  +SV G +D+IV+N PYI    +  L  EV
Sbjct: 141 DLSPDALALARENAARLELAGRVQFLASDLLASVTGEYDLIVANLPYIARDEIATLTREV 200

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R  DP  +LDGG DGL  +R      ++HL   G  ++EIG++Q   +  +  +     +
Sbjct: 201 R-HDPLSALDGGPDGLEVFRRFIPQAAQHLR--GRLALEIGHDQADPLTELLAAHNFQDI 257

Query: 248 NAFKDYGGNDRVLLFC 263
               DY G DR +   
Sbjct: 258 RPQTDYQGKDRFIFAT 273


>gi|289678405|ref|ZP_06499295.1| modification methylase HemK [Pseudomonas syringae pv. syringae FF5]
          Length = 277

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 123/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WF  ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWFGGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGAAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|254246466|ref|ZP_04939787.1| Methylase [Burkholderia cenocepacia PC184]
 gi|124871242|gb|EAY62958.1| Methylase [Burkholderia cenocepacia PC184]
          Length = 280

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LDD           R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDDAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L  G DGLS  RTI  G   +L   G   +E GY+Q   V  I 
Sbjct: 195 PHLAQGDLR-FEPRGALTDGADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRAIL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFVAVESLADLTAIERTT 274


>gi|332971800|gb|EGK10748.1| protein-(glutamine-N5) methyltransferase [Desmospora sp. 8437]
          Length = 314

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 5/261 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S   L    G     +       L           + +  +   +  ++G ++FY     
Sbjct: 51  SELLLRTALGWDRTGLFTRFHEPLPFEAAQRFITWLKQRAEGIPVQYLIGEQEFYGRSFR 110

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE+LV++ L  +   I K   V  +D+GTG+GA+ + L  E P ++ V 
Sbjct: 111 VEPSVLIPRPETEILVETVLREA-DGIWKGKAVTAVDMGTGSGAIAVTLAAERPAWEVVA 169

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
           VD S  AL++A+ N   NG  +R   +Q DW   +   +   DV+VSNPPYI +  +  L
Sbjct: 170 VDRSPAALKVARQNGAKNGSGDRIRWMQGDWLEPLLKRDLRVDVVVSNPPYIPAGEIPRL 229

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
            +EVRD +PR++LDGG DGL  YR +  G+   L   GL   E+G +Q   V  + E   
Sbjct: 230 DVEVRDHEPRMALDGGPDGLDPYRILVRGIPAVLKNPGLVVFEVGEDQSETVGEMLEESL 289

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V    D  G  RV+   
Sbjct: 290 AGAQVFFVSDLAGRPRVVAAR 310


>gi|254000221|ref|YP_003052284.1| HemK family modification methylase [Methylovorus sp. SIP3-4]
 gi|253986900|gb|ACT51757.1| modification methylase, HemK family [Methylovorus sp. SIP3-4]
          Length = 297

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/274 (32%), Positives = 124/274 (45%), Gaps = 18/274 (6%)

Query: 2   QALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A  ++   + +  G +    +I      L         + + R L  E I  ILG R+F
Sbjct: 25  EARNEARMLMSQALGNVEHAWLIAHESDALPSAVASAFHDLLHRRLAGEPIAYILGNREF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +RL +S  T  PRP+TE LV++ALA    RI   D   +LDLGTGTGA+ LA+    P
Sbjct: 85  FGLRLAVSPATLIPRPDTETLVEAALA----RIPSEDTREVLDLGTGTGAIALAIAAHRP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-----------RFDTLQSDWFSSVEG-LFDVI 168
             + +GVD S  AL++A+ NA   G++              +     WF+ + G  FDVI
Sbjct: 141 KSRVIGVDASAAALQVARQNAEALGLAITEPDTHGITKGNVEFRLGSWFTPLAGLKFDVI 200

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI          ++R  +P  +L  G DGL   R I      H    G   +E G
Sbjct: 201 VSNPPYIRKDDPHLQQGDLR-HEPFSALASGADGLDDIRIIVQHAPAHFQPSGWLLLEHG 259

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           Y+Q   V  +        V    D  G  RV L 
Sbjct: 260 YDQADAVATLMRDTGFSDVQHAHDLAGIARVTLG 293


>gi|308186586|ref|YP_003930717.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
 gi|308057096|gb|ADO09268.1| possible protoporphyrinogen oxidase [Pantoea vagans C9-1]
          Length = 277

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   ++ L D Q   L + + R  + E +  ++G R+F++
Sbjct: 20  PKRDAEILLGFVTGKSRSWLIAFDETALSDAQLAQLDSLLARRARGEPVAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TELLV+ ALA             ILD+GTGTGA+ LAL  E P  
Sbjct: 80  LPLRVSDATLIPRPDTELLVEQALAHL-----PATPSTILDMGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +  GVD    A+E+A SNA    +S     L S WF ++    F +IVSNPPYI++    
Sbjct: 135 QVTGVDRIEAAVELAGSNAEQLNLSNT-TFLLSHWFQALTPQHFTLIVSNPPYIDASDTH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  RT+ +     L   G   +E G+ Q   V  + ++
Sbjct: 194 LEQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMQN 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN RV L  
Sbjct: 253 NGYHAVETVRDYGGNPRVTLGQ 274


>gi|114046305|ref|YP_736855.1| HemK family modification methylase [Shewanella sp. MR-7]
 gi|113887747|gb|ABI41798.1| modification methylase, HemK family [Shewanella sp. MR-7]
          Length = 286

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+  FL      S   +   P+  L   Q       + R  +   +  I+G R+F++
Sbjct: 25  AHLDAEVFLLYCLNKSRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N  TN   E+ + LQSDWFS+++   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVEEAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278


>gi|126172945|ref|YP_001049094.1| HemK family modification methylase [Shewanella baltica OS155]
 gi|125996150|gb|ABN60225.1| modification methylase, HemK family [Shewanella baltica OS155]
          Length = 282

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      S   +   P+  L   Q       + +  K   +  I+G R+F++
Sbjct: 25  AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL   L          +LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETALNMPLSTYAN-----VLDLGTGTGAIALALASERESW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A +N     +  + D LQSDWFS+V+   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA+    +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278


>gi|218133362|ref|ZP_03462166.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992235|gb|EEC58239.1| hypothetical protein BACPEC_01227 [Bacteroides pectinophilus ATCC
           43243]
          Length = 289

 Score =  270 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 123/267 (46%), Gaps = 11/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  DS + L  +TG+     I++    + +         I R   H  +  I G   FY
Sbjct: 29  DAEYDSFALLEYITGMDRTAYILNGSKSVPEDIAERYDAVIDRRSSHIPLQHITGQAWFY 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++SD   PR +TE+LV  AL     +        +LD+ TG+G + + L  E   
Sbjct: 89  GRGFNVNSDVLVPRQDTEVLVSEALKVINAKDS------VLDMCTGSGCIIITLALEKKL 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + +G DIS  AL++A  N    G  +    ++S+ FS +    + LFDVIVSNPPYI +
Sbjct: 143 GRALGADISEAALKVASGNREKLGADD-VTFVKSNIFSDINVNDDELFDVIVSNPPYIAT 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             ++ L  EVR  DP I+LDG  DGL  YR I      ++   G    EIG  Q  DV  
Sbjct: 202 GEIETLTEEVRIHDPYIALDGLEDGLHFYREITQQSMNYIKSGGWLLYEIGCTQAHDVSD 261

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I        +   KD  G DRV++  R
Sbjct: 262 IMSEYGYSNIKVIKDLAGLDRVVMGQR 288


>gi|302186443|ref|ZP_07263116.1| modification methylase HemK [Pseudomonas syringae pv. syringae 642]
          Length = 277

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEMLVEAALEL----VPAFASAQLLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S WFS ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRKRLQL-NNAEVFESHWFSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNADGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|126736398|ref|ZP_01752140.1| modification methylase, HemK family protein [Roseobacter sp. CCS2]
 gi|126714219|gb|EBA11088.1| modification methylase, HemK family protein [Roseobacter sp. CCS2]
          Length = 288

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+       +G+++ ++ +     ++D  +      I R  + E +  + G R FY
Sbjct: 25  DAARDARKLFAFASGVAAGRLTLILPEPVNDAVKTRFDALIARRSRFEPVSHLTGTRAFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE L+++AL        +    R+LDLGTG+G + + LL E+P 
Sbjct: 85  GRDFEVTKDVLDPRPETETLIEAAL--------RDPFARVLDLGTGSGCILVTLLAENPK 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG D S  AL +A  NA  +GV +R   +QSDW ++++  FD+IV+NPPYI +  + 
Sbjct: 137 AVGVGGDASAVALTVALRNAQRHGVDDRATFVQSDWMAAIKRRFDLIVANPPYIAADEMA 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR+++PR++L    DGLS YRTI       L   G    EIG  Q   V  +   
Sbjct: 197 GLSRDVREWEPRMALTDEADGLSAYRTIIKQAGDALIPGGRLMCEIGSTQGHAVAELMIR 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V    D  G DRV+
Sbjct: 257 AGLRHVGVIPDLDGRDRVV 275


>gi|254474677|ref|ZP_05088063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruegeria sp. R11]
 gi|214028920|gb|EEB69755.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruegeria sp. R11]
          Length = 285

 Score =  270 bits (691), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 96/262 (36%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     LD          I        +  ++G R+FY
Sbjct: 25  DPARDARVLLAHAARIEASRVTLIAPEDLDPDVAERYEQLISLRAIRVPVSHLVGEREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +SSD  +PRPETE L+++ALA            R+LDLG G+G + + LL E P 
Sbjct: 85  GRRFKVSSDVLDPRPETECLIEAALA--------EPFARVLDLGLGSGCILVTLLAEQPK 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  A   A +NAV + V  R D  QSDWF+ VEG FD+IVSNPPYI    ++
Sbjct: 137 ATGLGVDLSEAACLQASANAVLHRVEPRADVRQSDWFAQVEGQFDLIVSNPPYIALDEME 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGLS YR I+  V+ +L   G   +EIG  Q   V  +  +
Sbjct: 197 GLSAEVRGHEPEMALTDGADGLSAYRAISQQVAEYLAPGGRVLLEIGPTQGAQVAEMLRT 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V    D  G DRV+   
Sbjct: 257 AGLVDVRVLPDLDGRDRVVFGR 278


>gi|28210062|ref|NP_781006.1| methyltransferase [Clostridium tetani E88]
 gi|28202497|gb|AAO34943.1| methyltransferase [Clostridium tetani E88]
          Length = 292

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + +S   L +V       ++++ D  +   ++      I    +   I  ILG  +F  +
Sbjct: 29  ILESQLLLGKVINKDRLFIMINKDYKVSKEEKDQYLKLIDIRKEKMPIKYILGICEFMGL 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRP+TE+LV+ ++      I K     I D+  G+G + +++        
Sbjct: 89  SFKIREGVLIPRPDTEILVEKSIEI----IRKNHYKNISDVCCGSGIIGISIATFVDKVN 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIV 180
               D+    L++ + N   N +  +    +S+           +D+IVSNPPYI+   +
Sbjct: 145 VECFDVEEIPLKVTEENIKLNRLEGKVKVFKSNLLEYAIKNSIKYDMIVSNPPYIKKREI 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V++++P I+LDGG DGL  Y+ I       LN  G  + EIGY+QK +V  I E
Sbjct: 205 TNLMEDVKNYEPHIALDGGEDGLYFYKNIVKQSKHLLNSGGTIAFEIGYDQKEEVSCILE 264

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           S     +  +KD  G DRV++  
Sbjct: 265 SNGFVNIECYKDLAGLDRVVIGT 287


>gi|325294566|ref|YP_004281080.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065014|gb|ADY73021.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 288

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 8/264 (3%)

Query: 3   ALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A  D+   L    G     ++  + +  L + +       I R  K E +  + G ++F+
Sbjct: 30  ARLDAELLLAHSLGFKDRIKLYTEFERPLTEEEVENYRQLIKRRAKGEPVAYLTGEKEFF 89

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETELLV+    +    ++ ++   I+D+GTG+G + L L K    
Sbjct: 90  GFTFKVQKGVLIPRPETELLVEVVYDY----LKDKEDKTIVDVGTGSGCIILTLYKLLGD 145

Query: 122 -FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +G DIS  AL++A  N    G     + ++ D    +    DVIVSNPPYI     
Sbjct: 146 KHRYIGTDISSIALKVANENKELLGC-NNVEIVKMDLLKEINYPVDVIVSNPPYIPFGDK 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV  ++P ++L GG  GL     +    ++ L+ +G  ++EIG  Q   V ++ E
Sbjct: 205 K-LDKEVLKYEPAVALFGGKSGLEIVERLIGESAKKLSSNGFFAIEIGKGQSKGVKKLLE 263

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   KD  G +RV+   R
Sbjct: 264 KAGFRNIKLHKDLAGVERVISAER 287


>gi|304397560|ref|ZP_07379437.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. aB]
 gi|304354732|gb|EFM19102.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. aB]
          Length = 276

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   +I   ++VL D Q   L + + R  + E +  ++G R+F++
Sbjct: 20  PKRDAEILLGYVTGKSRSWLIAFDETVLSDEQLAQLNSLLARRARGEPVAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV+ ALA             ILD+GTGTGA+ LAL  E P  
Sbjct: 80  LPLRVTDATLIPRPDTELLVEQALAHL-----PATPSTILDMGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +  GVD    A+E+A SNA    +S     L S WF ++    F +IVSNPPYI++    
Sbjct: 135 QVTGVDRIQAAVELAGSNAQQLSLSNT-RFLLSHWFQALTPQRFSLIVSNPPYIDASDSH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  RT+ +     L   G   +E G+ Q   V  +   
Sbjct: 194 LEQGDVR-FEPRSALVADEAGLADLRTLIEQAPAWLLPGGWLLLEHGWQQGEAVATLMRQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V    DYGGN RV L  
Sbjct: 253 NGYHAVETVNDYGGNPRVTLGQ 274


>gi|110833385|ref|YP_692244.1| methyltransferase [Alcanivorax borkumensis SK2]
 gi|110646496|emb|CAL15972.1| methyltransferase [Alcanivorax borkumensis SK2]
          Length = 280

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 92/260 (35%), Positives = 133/260 (51%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V   S   +   P+  L   Q+      + R  + E +  ++G R+F+ 
Sbjct: 20  AALDAQVLLCHVLEQSRTWLFTWPERELTRAQQAEFEALLARREQGEPVAHLIGEREFFG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R ++++DT  PRP+TE LV+  LA +LP        R++DLGTGTGA+ + L  E P +
Sbjct: 80  RRFSVTADTLIPRPDTETLVEQVLALALPA-----NARVVDLGTGTGAIGITLALEQPAW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD S  AL++A +NA   G + R   LQ  W +  +G FD++VSNPPYIE   V  
Sbjct: 135 QVTLVDNSAAALQVAAANARQLGATVR--CLQGSWLTPCDGFFDLVVSNPPYIEDGDVHL 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+PR +L  G  GL+   TIA   +  L   G   +E G+ Q   V  +    
Sbjct: 193 AQGDVR-FEPRSALVAGDQGLADLITIAQQAAGKLVAGGWLLLEHGFEQGDAVRALLADI 251

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   +D GGNDRV L 
Sbjct: 252 GFEDVRTEQDLGGNDRVTLG 271


>gi|328542098|ref|YP_004302207.1| Protein-(glutamine-N5) methyltransferase, release factor-specific
           [polymorphum gilvum SL003B-26A1]
 gi|326411848|gb|ADZ68911.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Polymorphum gilvum SL003B-26A1]
          Length = 281

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+        GLS   +++  D+ +D  +       +        + RILG R+F+ 
Sbjct: 22  PELDARMLTADAAGLSPGDIVLREDAEVDPAREALARAHVAARCGGTPVGRILGRREFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L+LS  T EPRP+TE LV++ LA    R        + D+GTG+GA+ +A+L   P  
Sbjct: 82  LELSLSPATLEPRPDTETLVEAVLA----RAGGEAAPVLADIGTGSGAIAIAVLTALPEA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V  DIS +AL  A++NA+ +GV  R   +Q  + + +   FD IVSNPPYI S  VD 
Sbjct: 138 CAVATDISLEALATARANALRHGVDGRMLFVQGSYGAPLGAGFDWIVSNPPYIASAEVDR 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ DPR +LDGG DGL  YR I       L   G  +VEIG +Q  +V  +    
Sbjct: 198 LAREVREHDPRRALDGGADGLDAYRAIVPAARHSLRPGGRLAVEIGADQGAEVAELMAEN 257

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
             F V   +D  G  RV+  CR
Sbjct: 258 GFFDVEIIRDLAGRPRVVSGCR 279


>gi|316932076|ref|YP_004107058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris DX-1]
 gi|315599790|gb|ADU42325.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodopseudomonas palustris DX-1]
          Length = 289

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 105/262 (40%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  VTGL    ++V  +  L   +   L     R L  E + RILG R+F+ 
Sbjct: 26  AALDARLLVGEVTGLDLTGLLVQAERPLTKDESERLRTFAARRLAGEPVARILGVREFWG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS+DT  PRP+TE +VD+ALA    R       RILD+GTG+GA+ LALL E P  
Sbjct: 86  LPFELSADTLVPRPDTETVVDAALAVLGER--DAPAPRILDIGTGSGAILLALLSELPGA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A+ NA   G++ R   +  D+ S++ G FD+IVSNPPYI    +  
Sbjct: 144 GGVATDISLGALRTARRNAERLGLARRARFVACDYASALSGPFDLIVSNPPYIPVNEIAE 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ DPR +LDGG DGL  YR I    +  L  DG   VEIG  Q+ DV  + ++ 
Sbjct: 204 LDREVREHDPRRALDGGADGLDAYRKIIPESAGLLQPDGALVVEIGQGQETDVSALMQAA 263

Query: 243 KLFLVNAFK-DYGGNDRVLLFC 263
            L + + F+ D  G  R +   
Sbjct: 264 GLTVSDPFRADLSGIFRAVTGR 285


>gi|295094044|emb|CBK83135.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coprococcus sp. ART55/1]
          Length = 287

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 129/263 (49%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+      ++G++   +I+  +  +DD +       I +      +  I G ++F 
Sbjct: 21  DADIDADILWQYLSGMNRMDMIMAREDDVDDDKSEAYMKLIEKRSTRIPLQYITGEQNFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                 + D   PR +TE LV++AL       +    V +LD+  G+G + ++    +  
Sbjct: 81  GYDFDTAEDVLIPRMDTETLVETALKLVK---DADHNVDVLDMCCGSGCIGVSFGLWNKN 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            + V  D+S  A+ +A+ N        +RF+ +++D F  + G +D+I+SNPPYI S ++
Sbjct: 138 SRIVLADVSEAAIGLARRNVAKLCAGDDRFEVVRTDLFEQISGKYDLILSNPPYIRSDVI 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR+ +P ++LDG  DGL  YR IAD    ++  +G    EIG +Q  DV  +  
Sbjct: 198 ETLMPEVREHEPHLALDGTADGLYFYRIIADKAREYIKDEGYVVFEIGNDQAEDVQYLLV 257

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 ++  +D  GNDRV+   
Sbjct: 258 DSGYDDIHVVQDLSGNDRVVYGR 280


>gi|78187349|ref|YP_375392.1| modification methylase HemK [Chlorobium luteolum DSM 273]
 gi|78167251|gb|ABB24349.1| Modification methylase HemK [Chlorobium luteolum DSM 273]
          Length = 296

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 6/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  V  ++   + +  +  +   +         + L    +  I G + FY
Sbjct: 28  EARLGAELLLAHVLKMARLDLYLQHERPVYPDELERFRELCRQRLGGRPLQYITGEQWFY 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +      PRPETELLV+ AL            V RILD GTG+G + L +    P
Sbjct: 88  GLPFHVDRRVLIPRPETELLVEFALELLESDGASASGVPRILDAGTGSGCIALTMAIRMP 147

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIE 176
             + VG+D+S +ALE+A++NA  +G  +R      D     FS     FD++VSNPPYI 
Sbjct: 148 TLQAVGIDVSLEALEVARTNAERHGAGDRVSFAVGDMTDPLFSPPGAPFDMLVSNPPYIP 207

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 L  EVRD +P+++L   + G+  YR +A    R L   G  ++EI  +    VV
Sbjct: 208 ESEWAGLQPEVRDHEPKLALTVPV-GMECYRALAAMAGRLLRPGGRIALEIHADGAGGVV 266

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            + E   +  +   KDY G +R++
Sbjct: 267 ELLEEAGMLDIVVKKDYAGLNRIV 290


>gi|89897679|ref|YP_521166.1| hypothetical protein DSY4933 [Desulfitobacterium hafniense Y51]
 gi|89337127|dbj|BAE86722.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 285

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 11/269 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  +  L   Q+ ++ +  L   Q       I R  + E +  I+  ++F 
Sbjct: 21  NPRWDADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            +   +      PR +TE+LV+  L        S  R    +   I DL TG+GA+ +++
Sbjct: 81  GLDFYVDERVLIPRADTEILVEKVLELKKEWQHSADRAGGGESPHIADLCTGSGALAISI 140

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
               P  + VG D+S  AL++A+ N    GV  R    Q D+   + G  +D+IVSNPPY
Sbjct: 141 AHFWPQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPY 198

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +       L  E+   +PR++  GG DGL  YR +A      L + G+  VEIG+ Q   
Sbjct: 199 VTQAEYGELAPELAK-EPRMAFLGGADGLDFYRELAREARSLLREKGIILVEIGWQQGNS 257

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           V  +F+ +        +D GG DRV+   
Sbjct: 258 VAELFQQQGFQT-QIVQDLGGRDRVVFAR 285


>gi|293392124|ref|ZP_06636458.1| protein methyltransferase HemK [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952658|gb|EFE02777.1| protein methyltransferase HemK [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 299

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 91/270 (33%), Positives = 146/270 (54%), Gaps = 15/270 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++    LT  + R L+ E I  ILG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTGAVCL-------A 114
            +S+ T  PRP+TE+LV+ A+A ++ +++K        RILDLGTGTGA+ L       +
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKS 145

Query: 115 LL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +  K +     +GVD++ + + +AKSN   N +      +QS WF +V G FD+I+SNPP
Sbjct: 146 IAQKHAVQLDIIGVDLTPEVVALAKSNGAKNQL--NVTFVQSRWFENVTGTFDLILSNPP 203

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI++        +VR F+P  +L    +G +  R I     + + ++G   VE G+ Q  
Sbjct: 204 YIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQQGE 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V  IF+      V   +DYG N+RV L C
Sbjct: 263 KVRSIFQGNFWSAVETLRDYGNNERVTLGC 292


>gi|254253377|ref|ZP_04946695.1| Methylase [Burkholderia dolosa AUO158]
 gi|124895986|gb|EAY69866.1| Methylase [Burkholderia dolosa AUO158]
          Length = 280

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 122/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDEPLDAAAIERYRALEARRAAGEPVAQLVGVREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPYPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA       R       LQSDW+++++   +FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVARRNADKLLDPHRPGGPLHWLQSDWYTALDAAPVFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+    V  + 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDHAEAVRTLL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 TSHGFVAVESLADLAAIERTT 274


>gi|115350467|ref|YP_772306.1| HemK family modification methylase [Burkholderia ambifaria AMMD]
 gi|115280455|gb|ABI85972.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 280

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 11/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ L+            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLEPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G    L   G   +E GY+Q   V  + 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAFLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            SR    V +  D    +R     R
Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278


>gi|237748572|ref|ZP_04579052.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
 gi|229379934|gb|EEO30025.1| methyltransferase HemK MTase hemK [Oxalobacter formigenes OXCC13]
          Length = 279

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 11/264 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +    L    G S  ++I   D  L   Q   L++ + R +  E +  I G R+F+ + 
Sbjct: 22  LELRILLEYAIGFSRVKLITHSDHPLTTEQAKALSDVVSRRVCGEPVAYITGKREFFGLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +  D   PRPETELLV+ AL             +I+D+GTG+GA+ +A+  E P    
Sbjct: 82  FAVCPDVLIPRPETELLVELALERL------PHGGKIVDMGTGSGAIAIAIASERPDAHV 135

Query: 125 VGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              D+S KAL +A  NA       +       +WF +++     FD+IVSNPPYI+S   
Sbjct: 136 FATDVSEKALNMATHNALALLKGKQTVHFSAGNWFYALKNVNETFDLIVSNPPYIDSKDD 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGLS  + +  G   +L + G   +E GY+Q V V  +  
Sbjct: 196 HLQKGDLR-FEPVGALTDHADGLSALKILVSGAQAYLKRGGWLLMEHGYDQAVAVRALLA 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V ++KD  G  RV    R
Sbjct: 255 RAGFEEVQSWKDLAGIGRVSGGKR 278


>gi|307823418|ref|ZP_07653647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacter tundripaludum SV96]
 gi|307735403|gb|EFO06251.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacter tundripaludum SV96]
          Length = 284

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+   LC+        +   PD  L           + +  +   I  I G R+F++
Sbjct: 22  ALLDAEILLCQALNQPRSHLRAWPDKPLLPEHLAAFRALLEQRQQGIPIAYITGNREFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S D   PRP+TELL++     SL  I   D V+I+DLGTG+G + + L  E P  
Sbjct: 82  RDFQVSPDVLIPRPDTELLIEL----SLKLIPADDPVKIIDLGTGSGIIAITLAAERPHA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +    D S  AL IA+ NA  + +       QS+WF+ V    F++++SNPPYI      
Sbjct: 138 QISATDFSLAALRIARLNADKHHI-NTIQFYQSNWFADVPATQFNLVISNPPYIAEDDSH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     GL   + IAD    +L   G   +E GY+Q+  V  +F+ 
Sbjct: 197 LQQGDVR-FEPQTALCAAEQGLGDIKIIADAARNYLEPRGHLLIEHGYDQQQQVQTLFKD 255

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V  + D  G  RV 
Sbjct: 256 LHYDNVQTYTDLSGQPRVT 274


>gi|21672455|ref|NP_660522.1| hypothetical protein BUsg166 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25090515|sp|Q8K9W9|HEMK_BUCAP RecName: Full=Protein methyltransferase hemK homolog
 gi|21623069|gb|AAM67733.1| HemK [Buchnera aphidicola str. Sg (Schizaphis graminum)]
          Length = 275

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 7/263 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L  V   +   +I++ +  L   Q   L N I R    E I  I+G ++F+
Sbjct: 19  NPRYEAEILLSHVLKCTRIAIIINQEIDLSKEQYQKLNNFIYRRSIGEPIAYIIGKKEFW 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +S  T  PRP+TE+LV+  L+        ++   ILDLGTG+GA+ LAL      
Sbjct: 79  SLSLCVSYKTLIPRPDTEILVEKILSKV-----NKNFRSILDLGTGSGAIALALASVCSH 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +  +GVD S  AL+IAK N +   +    +   S+WFS +   F +IVSNPPYI    + 
Sbjct: 134 WNIIGVDNSYSALKIAKINGLKLNLK-NVEFFYSNWFSHINEKFHIIVSNPPYIGIKEIQ 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  ++  ++P  +L    DGL     I    S++L   G   +E G+ QK+ V   F+ 
Sbjct: 193 SLKKDIF-YEPFNALISKKDGLLDIELIIQKASQYLFDKGWLFIEHGWKQKLKVQYFFKK 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F + +FKDYGGNDR+    +
Sbjct: 252 YNFFCIQSFKDYGGNDRITFGQK 274


>gi|260433481|ref|ZP_05787452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417309|gb|EEX10568.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 281

 Score =  270 bits (690), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 133/259 (51%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           +        +  +LG R+FY
Sbjct: 25  DPARDARVLLAHAARIEASRVTLIAPEELSPEIAERYEQLVSLRAIRVPVSHLLGEREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++AL+        +   R+LDLG G+G + + LL E   
Sbjct: 85  GRRFRVSRDVLDPRPETEALIEAALS--------QPFDRVLDLGVGSGCILVTLLAERTS 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  A   A +NAVT+GV +R +  +SDWF ++ G FD+IVSNPPYI    +D
Sbjct: 137 ATGLGVDLSEAACLQASANAVTHGVQDRAEIQRSDWFENIGGYFDLIVSNPPYIALDEMD 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+ +PR++L    DGL  YR IA G   HL   G   VEIG  Q   V  +F++
Sbjct: 197 GLSPEVREHEPRLALTDEADGLDAYRRIAAGAPDHLMPGGRILVEIGPTQAKAVSALFDA 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  +    D  G DRV+
Sbjct: 257 AGLSDIRIIPDLDGRDRVV 275


>gi|134294602|ref|YP_001118337.1| HemK family modification methylase [Burkholderia vietnamiensis G4]
 gi|134137759|gb|ABO53502.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 280

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ L+            R +  E + +++G R+F+    
Sbjct: 19  DARVLLSHALGWTRTQLITRGDAPLEPAAIARYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  ALE+A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALEVAQRNAAKLLDARRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  + 
Sbjct: 195 PHLEQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFVAVESLADLAAIERTT 274


>gi|27262484|gb|AAN87523.1| methyltransferase [Heliobacillus mobilis]
          Length = 319

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 23/282 (8%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             ++          S   ++      L       L   ++   K   +  I G ++F+ +
Sbjct: 31  RLEAEVLFAYGMEKSRAGLLASLRDPLTVEMAEKLERLVMERSKGCPLQYITGRQEFWGM 90

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--------------------ILD 103
            L ++     PR +TELLV++AL     ++      +                    + D
Sbjct: 91  ELQVNPAVLIPRADTELLVEAALTSLKEKMAGFPKRQDKGCDDSPPAQGSVAGKEIWLAD 150

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+GA+ LA+ KE      +  D+S +AL  A+ NA  NG+  R    + D    V  
Sbjct: 151 VGTGSGAIALAMAKELRCVNVIATDLSPEALATARGNAERNGLGHRITFWEGDLLEPVIA 210

Query: 164 ---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                  ++SNPPYI +  +  L  EV  F+PR++LDGG DGL  YR +     + L   
Sbjct: 211 AGLPLQAVLSNPPYIPTEDIGGLQREVAQFEPRLALDGGGDGLHLYRRLIPQARKVLVPG 270

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           GL ++EIG++Q   V  +        V    D+ G+DRV++ 
Sbjct: 271 GLIALEIGFDQGSSVAELMVQHGFVEVRVLPDFQGHDRVVMG 312


>gi|170731834|ref|YP_001763781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia cenocepacia MC0-3]
 gi|169815076|gb|ACA89659.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia cenocepacia MC0-3]
          Length = 280

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LD            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAIERYRALEARRVAGEPVAQLVGTREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVAQRNADKLLDARRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G S +L   G   +E GY+Q   V  I 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGASAYLKPGGTLWIEHGYDQAEAVRAIL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFVAVESLADLAAIERTT 274


>gi|114704326|ref|ZP_01437234.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506]
 gi|114539111|gb|EAU42231.1| protoporphyrinogen oxidase [Fulvimarina pelagi HTCC2506]
          Length = 298

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 104/259 (40%), Positives = 145/259 (55%), Gaps = 1/259 (0%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  V G+ +  ++   +  ++       T  I R    E +HRILG R FY    
Sbjct: 32  DTRVLMADVLGIETSSLLARRERPIEPDAEERFTAYISRRRSGEPVHRILGKRGFYGHDF 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS+ T EPRP+TE++V+  +AF L  +++   +R+LD+GTG+G + L++L   P     
Sbjct: 92  ELSAGTLEPRPDTEIVVEMGIAF-LRTVDRDRPLRVLDIGTGSGVIALSILVALPHTHAF 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DIS  AL  A+ NA    V  RF+T  +D+ + + G  D+ +SNPPYI +  +  L  
Sbjct: 151 GTDISEDALATARRNAKRLKVDARFETSVTDYAAGITGPLDLAISNPPYIATRDIAGLSS 210

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRDFDP+ +LDGG DGL  YR IA  V   L  DG   VEIG +QK  V RIFE+    
Sbjct: 211 EVRDFDPKSALDGGEDGLKAYRAIAAQVRSVLADDGSVVVEIGIDQKDPVTRIFEACGFT 270

Query: 246 LVNAFKDYGGNDRVLLFCR 264
           L +  KDYGG  R L F R
Sbjct: 271 LSDWRKDYGGIVRALRFSR 289


>gi|117919222|ref|YP_868414.1| HemK family modification methylase [Shewanella sp. ANA-3]
 gi|117611554|gb|ABK47008.1| modification methylase, HemK family [Shewanella sp. ANA-3]
          Length = 286

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+  FL      +   +   P+  L   Q       + R  +   +  I+G R+F++
Sbjct: 25  AHLDAEVFLLYCLNKNRAFLYTWPEKALTVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETAL-----NLPLESNAKVLDLGTGTGAIALALASERATW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +AK+N  TN   E+ + LQSDWFS+++   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAIKAHDFDLIVSNPPYIDEADEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLREKLTE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278


>gi|293365353|ref|ZP_06612070.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307703895|ref|ZP_07640836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus oralis ATCC 35037]
 gi|291316803|gb|EFE57239.1| protein-(glutamine-N5) methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307622730|gb|EFO01726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus oralis ATCC 35037]
          Length = 278

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 76/247 (30%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      +   +  F+     + + H+    I+G  +F+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTKEEENFVEEIYQQLVAHKPAQYIIGHAEFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L  +       + +++LD+GTG+GA+ LAL K  P +     DIS +AL+
Sbjct: 93  PETEELVELILTEN-----PEENLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALQ 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENAKNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|224368816|ref|YP_002602977.1| HemK [Desulfobacterium autotrophicum HRM2]
 gi|223691532|gb|ACN14815.1| HemK [Desulfobacterium autotrophicum HRM2]
          Length = 295

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 81/257 (31%), Positives = 118/257 (45%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     +    + +  D  L+  +       I R    E +  I G + F+    T
Sbjct: 33  AEILLSHALSIKRLDLYLQHDRPLNRDELAAFRQLIERRGDREPVAYITGTKGFWESEFT 92

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRP+TE+LV+ AL F     +   + R+L+LG G+GAV +++ K +P      
Sbjct: 93  VAPGVLIPRPDTEVLVEQALEFL--ARKNISMGRVLELGVGSGAVIISIAKANPGLYCFA 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLG 184
            DIS   LE+A  N            +   WFS   G   FD+IVSNPPYI +  +  L 
Sbjct: 151 TDISLIPLEVAAFNVKQELELPNLSFVAGSWFSPFNGRAKFDLIVSNPPYIPTGDIQGLQ 210

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
            EV  F+P ++LDGG DGL   R I      HL   G+  +E G  Q+  V +IF+    
Sbjct: 211 PEVSRFEPSLALDGGEDGLDCIRLIMAKACDHLVPGGVLLMETGSGQRRGVEKIFKECPG 270

Query: 244 LFLVNAFKDYGGNDRVL 260
              V  F DY G  RV+
Sbjct: 271 FSTVEFFNDYAGLHRVV 287


>gi|219682102|ref|YP_002468486.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219621835|gb|ACL29991.1| HemK protein [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|311085915|gb|ADP65997.1| HemK protein [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086486|gb|ADP66567.1| HemK protein [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087069|gb|ADP67149.1| HemK protein [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)]
 gi|311087621|gb|ADP67700.1| HemK protein [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 277

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 136/259 (52%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  VT  +   +I+  +  L ++Q  +L + I R    E I  I+  ++F+++ L
Sbjct: 23  ESELLLSYVTKHTRSFIIISDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S DT  PRP+TE+LV+ AL+       K +   ILDLGTG GA+ LAL   +  +  +
Sbjct: 83  CVSYDTLIPRPDTEILVERALSKI-----KSNSACILDLGTGCGAIALALASINSNWNII 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL IA+ NA             SDWFS+++  F++IVSNPPY+    +     
Sbjct: 138 GIDKSENALAIARINASKLNFK-NVTFFFSDWFSNIKKKFNIIVSNPPYVSKKEIKFFKK 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++  F+P  +L    +GLS    I      +L   G   +E G+ QKV V  +F+     
Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            + +++DYGGNDRV +  +
Sbjct: 256 EIESYQDYGGNDRVTIGKK 274


>gi|119357671|ref|YP_912315.1| HemK family modification methylase [Chlorobium phaeobacteroides DSM
           266]
 gi|119355020|gb|ABL65891.1| modification methylase, HemK family [Chlorobium phaeobacteroides
           DSM 266]
          Length = 301

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 11/268 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  V GL    + ++ +  +   +         + L+ + +  I G + FY
Sbjct: 31  EARISAELLLASVLGLDRLGLYLNHNRPVYPGELEAFRALCRQRLEGKPVQYITGEQFFY 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----VRILDLGTGTGAVCLALLK 117
            +   +      PRPETELLV+ AL F L  +   DV    + +LD+GTG+G + + L  
Sbjct: 91  GLPFFVDKRVLIPRPETELLVEHALEF-LGHVSAADVSEAALHLLDIGTGSGCIAVTLAS 149

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNP 172
             P      +DIS +AL +A++NA  +GV++R   L +D FS      +   FDVIVSNP
Sbjct: 150 RLPCLMVTAIDISTEALVVARNNAERHGVADRIRFLHADLFSLPDERGLSAPFDVIVSNP 209

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI       L  EVR F+P+++L    DG+  Y  +A+     L   G+   E   +  
Sbjct: 210 PYIAEDEWAGLQPEVRLFEPQLALTT-RDGIECYHAVAEVAPSLLKSGGMLCFESHADAA 268

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + V  I E      V   KDY G DRV+
Sbjct: 269 LKVAGIMERWGFSSVAVMKDYSGLDRVV 296


>gi|307731137|ref|YP_003908361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1003]
 gi|307585672|gb|ADN59070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1003]
          Length = 289

 Score =  269 bits (689), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 132/261 (50%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   D  L+            R +  E + +++G R+F+ + 
Sbjct: 27  LEARILLTHVLGWRQTQLITRADEALESACVERYLALQARRVAGEPVAQLVGVREFFGLE 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  + 
Sbjct: 87  FEVTPHVLIPRPETELLVETALA----AMENLARPRVLDLGTGTGAIAVAIAAMRPDAQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S +AL++A+ NA     ++R       +QSDW+ S+E    FDVIVSNPPYI S 
Sbjct: 143 SALDRSTEALKVAERNAARLLDAKRPGGAVTFMQSDWYGSLESTLRFDVIVSNPPYIASG 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R ++PR +L    DGLS  R I  G    L   G+  +E GY+Q   V  +
Sbjct: 203 DPHLTQGDLR-YEPRGALTDEADGLSAIRKIVAGAPARLAPQGVLWMEHGYDQAQAVRAL 261

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             ++    V + +D  G +R+
Sbjct: 262 LTAQGFADVRSERDLAGIERI 282


>gi|212636629|ref|YP_002313154.1| Modification methylase HemK [Shewanella piezotolerans WP3]
 gi|212558113|gb|ACJ30567.1| Modification methylase HemK [Shewanella piezotolerans WP3]
          Length = 280

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D+   L  +       +   P+  LD  Q       + + L+   I  I+G R+F++
Sbjct: 23  AMLDAEVMLLHIINKPRSYLYTWPERDLDSAQVSEFKQMLAKRLRGNPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  R+LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFRVNPTTLIPRPDTEILVETAL-----NLPLAENARVLDLGTGTGAIALSLAHERNEW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +D   +A+ +A  N V   + E  D  QSDWF +VE   F++IVSNPPYI+     
Sbjct: 138 QVCAIDKVEEAVALAIENRVNLKL-EHVDVFQSDWFDAVECYDFNLIVSNPPYIDEEDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L   + G +    IA+    +L   G   +E GY Q +++      
Sbjct: 197 LSQGDVR-FEPQSALTAPLKGFADLFHIANCARDYLAPGGYLLLEHGYQQAIELREKLIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  +  
Sbjct: 256 LGFENVATVRDFGSNDRCTIGR 277


>gi|153002120|ref|YP_001367801.1| HemK family modification methylase [Shewanella baltica OS185]
 gi|151366738|gb|ABS09738.1| modification methylase, HemK family [Shewanella baltica OS185]
          Length = 282

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      S   +   P+  L   Q       + +  K   +  I+G R+F++
Sbjct: 25  AHLDAEVLLLYCLNKSRSYLYTWPEKSLTVEQWKRFQQMVQKRQKGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL   L         ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETALNLPLSTY-----AKVLDLGTGTGAIALALASERESW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A +N     +  + D LQSDWFS+V+   FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVDDAVALAIANRENLKLP-QVDILQSDWFSAVKSRDFDLIVSNPPYIDETDEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA+    +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIANTARDYLKPNGYILLEHGFEQAVRLRAKLIE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278


>gi|153008372|ref|YP_001369587.1| HemK family modification methylase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560260|gb|ABS13758.1| modification methylase, HemK family [Ochrobactrum anthropi ATCC
           49188]
          Length = 287

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 105/259 (40%), Positives = 155/259 (59%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   +I  P+ ++D      L++A+ R  K E +HRI+G R+F+ + 
Sbjct: 24  LDARLLVEWATGKTRLDLISAPEQLVDSAVIETLSDALDRREKGEPVHRIMGVREFFGLP 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS+ T EPRP+TE+LV+  +        +++ + +LD+GTGTGA+ ++LL       G
Sbjct: 84  FRLSAATLEPRPDTEVLVELVIPALEALAVQKNTLELLDMGTGTGAIIISLLHRFERTHG 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+D++  AL +A+ NAV NGV +RF  L+SDWF +V G F +IVSNPPYI    +  L 
Sbjct: 144 IGLDMAEGALAMARINAVANGVGDRFAALKSDWFENVSGRFHLIVSNPPYIPHEDIAGLS 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG DGL+ YR +A   + HL K G+ +VEIG  Q  DV  +FES   
Sbjct: 204 REVREHDPLAALDGGSDGLNFYRALAQKAADHLYKQGMVAVEIGAGQFQDVEALFESAGF 263

Query: 245 FLVNAFKDYGGNDRVLLFC 263
            L     D GG+ R +LF 
Sbjct: 264 SLAGHASDLGGHRRAMLFA 282


>gi|222109994|ref|YP_002552258.1| type 12 methyltransferase [Acidovorax ebreus TPSY]
 gi|221729438|gb|ACM32258.1| Methyltransferase type 12 [Acidovorax ebreus TPSY]
          Length = 280

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 12/257 (4%)

Query: 6   DSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L  V G        ++      L             R  K E +  +LG ++F+ 
Sbjct: 22  DAQMLLLHVLGRAPTDRAWLLAHDGDTLPAAAMEQYAALCARRAKGEPVAYLLGRKEFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++ +   +PRP+TE LV  AL      +  R   R+ DLGTG+GA+ LAL  E P  
Sbjct: 82  LPLSVDARVLDPRPDTETLVAWALEV----LATRAAPRVADLGTGSGAIALALQHERPDA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + + VD S  AL +A++NA   G+  RF  +Q +W   V+G FD IVSNPPYI +     
Sbjct: 138 QVLAVDASADALAVARANAGQLGLPVRF--IQGNWLHGVDGSFDAIVSNPPYIAAQDPHL 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P  +L  G DGL   RTI       L   G   +E G++Q   V  +    
Sbjct: 196 ---AALTHEPLSALASGADGLEDIRTIVAQAPARLAPGGWLLLEHGWDQAEAVQALLRDA 252

Query: 243 KLFLVNAFKDYGGNDRV 259
               V +  D  G  R 
Sbjct: 253 GFDQVQSRHDLAGIARC 269


>gi|262375290|ref|ZP_06068523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter lwoffii SH145]
 gi|262309544|gb|EEY90674.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter lwoffii SH145]
          Length = 272

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L  +T + S  +++  D  L   Q     + + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHITKIDSFDLLMKKDQELTPEQEQAYKDGLARIAAGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PRP+TE+LV++ L   LP     +  R++DLGTGTGA+ L+L  E   +     D
Sbjct: 83  KDTLVPRPDTEVLVETVLKLDLP-----EDARVVDLGTGTGAIALSLASERSNWTVTASD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA  + + E  + +   W       F D IVSNPPYI++  V    L  
Sbjct: 138 IYEPTLEVAKYNAEQHDI-ENVEFVLGSWLKPFGRQFFDAIVSNPPYIDADDVHMQNLAT 196

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +P  +L     GL+    I     +HL  +G   +E GYNQ   V  +F+      V
Sbjct: 197 ---EPERALVADKKGLADIEMIILQAKKHLTVNGWVVLEHGYNQADAVQHLFKQAGYKQV 253

Query: 248 NAFKDYGGNDRVLLFC 263
              KDYGGNDRV L  
Sbjct: 254 RTVKDYGGNDRVTLGQ 269


>gi|104780101|ref|YP_606599.1| methylase of polypeptide chain release factors [Pseudomonas
           entomophila L48]
 gi|95109088|emb|CAK13785.1| Methylase of polypeptide chain release factors [Pseudomonas
           entomophila L48]
          Length = 276

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/249 (32%), Positives = 123/249 (49%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEAAELFAGYLERRRAGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      +      R+LDLGTGTGA+ LAL  E P ++   VD   +A+ 
Sbjct: 92  PDTELLVETALE-----LVPAKPARVLDLGTGTGAIALALASECPAWQVTAVDRIEEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G+        S W+ ++EG  FD+I+SNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLGLG-NVQVRASHWYDALEGEHFDLILSNPPYIRAADPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I     +HL   G   +E GY+Q   V  +  +     V +  D G
Sbjct: 205 ALVAGEDGLDDLRVIVAQAPQHLLPGGWLLLEHGYDQAPAVRELLSAGGFVDVASRVDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERISLGR 273


>gi|319789798|ref|YP_004151431.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermovibrio ammonificans HB-1]
 gi|317114300|gb|ADU96790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermovibrio ammonificans HB-1]
          Length = 283

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              D+   L    GL    ++    D  L D +       IVR  K E +  I G ++FY
Sbjct: 24  PRLDAELLLVHSLGLKGRVELYTQFDRPLTDDEVERYRQLIVRRAKGEPVAYITGKKEFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETELLVD AL++    ++ +    ++D+GTG+G V L L K    
Sbjct: 84  GFEFLVDRGVLVPRPETELLVDVALSY----LKGKQGKTVVDVGTGSGCVILTLCKLLGD 139

Query: 122 F-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +  GVD+S KALE+A+ N    G S     L+S+   +V+   D +V+N PY+     
Sbjct: 140 ANRYYGVDLSPKALEVAEKNRERLGCS--VTFLRSNLLEAVDFPVDAVVANLPYVPVGDK 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V  ++P ++L GG DGL     +       +N  G  ++E+G  Q   V  + E
Sbjct: 198 -RLHKWVLKYEPAMALFGGKDGLELIERLIVQAKEKINPKGFIALEVGEGQADRVKSLLE 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V +F+D  G +RV++  +
Sbjct: 257 TAGFLNVKSFRDLSGIERVVVGEK 280


>gi|261867617|ref|YP_003255539.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412949|gb|ACX82320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 299

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 21/273 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  VT  S   ++   ++ LD++    LT  + R L+ E I  ILG ++F+++ L
Sbjct: 26  DAQVLLQFVTQKSRAFILAFGETALDEKTLEKLTALLARRLQGEPIAYILGEKEFWSLPL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEK----RDVVRILDLGTGTG-----------A 110
            +S+ T  PRP+TE+LV+ A+A ++ +++K        RILDLGTGTG            
Sbjct: 86  NVSAGTLIPRPDTEILVEKAVAIAIEKLQKCGQNSQRFRILDLGTGTGAIALALASALKP 145

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +     K +     +GVD++ + + +AKSN   N +      +QS WF +V G FD+I+S
Sbjct: 146 IA---QKHTVQLDIIGVDLTPEVVALAKSNGEKNQL--NVAFVQSCWFENVTGTFDLILS 200

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI++        +VR F+P  +L    +G +  R I     + + ++G   VE G+ 
Sbjct: 201 NPPYIDAHDEHLTQGDVR-FEPLSALVAAEEGYADLRHIIANAPKFMRENGYLLVEHGWQ 259

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q   V  IF+      V   +DYG N+RV L C
Sbjct: 260 QGEKVRSIFQENFWSAVETLRDYGNNERVTLGC 292


>gi|260220344|emb|CBA27787.1| Protein hemK homolog [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 292

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/257 (33%), Positives = 120/257 (46%), Gaps = 12/257 (4%)

Query: 6   DSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           DS   L    G +      ++     +L ++    LT    R L  E +  ++G ++FY 
Sbjct: 35  DSRLLLLHAVGQARAGRAWLLAHDSDLLSEQALITLTRLANRRLAGEPVAYLVGHKEFYG 94

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+D   PRP+TE LV+ AL      +E     R++DLGTG+GA+ LAL    P  
Sbjct: 95  LNLQVSADVLVPRPDTETLVEWALE----TLEPTPHARVVDLGTGSGAIALALKATRPEL 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD S  AL +A+ NA   G+   F   Q  W  S EG F +IVSNPPYI       
Sbjct: 151 QVEAVDFSHAALAVAQGNAQRLGLEVAFG--QGSWLGSAEGKFQLIVSNPPYIREDDEHL 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                  F+PR +L  G DGL   RTI      HL   G    E GY+Q  DV  +  + 
Sbjct: 209 P---ALRFEPRQALTAGTDGLDDIRTIIRQAPEHLLAGGWLLFEHGYDQAGDVRGLLAAA 265

Query: 243 KLFLVNAFKDYGGNDRV 259
               V + +D  G +R 
Sbjct: 266 GFSEVQSRRDLAGIERC 282


>gi|167031790|ref|YP_001667021.1| protein-(glutamine-N5) methyltransferase [Pseudomonas putida GB-1]
 gi|166858278|gb|ABY96685.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudomonas putida GB-1]
          Length = 276

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/249 (32%), Positives = 123/249 (49%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAETYAGYLQRRRGGEPVAYILGQQGFWKIDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     ++LDLGTGTGA+ LAL  + P ++   VD   +A  
Sbjct: 92  PDTELLVETALE-----LQPAAPAKVLDLGTGTGAIALALASDRPAWQVTAVDRVEEAAA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G+ +      S WF S+ G  FD+IVSNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLGL-DNAQVRVSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R IA     HL   G   +E GY+Q   V  +   +    V +  D G
Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEQGFVEVASRTDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERITLGR 273


>gi|300025030|ref|YP_003757641.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526851|gb|ADJ25320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 295

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 2/258 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  + G+    ++  P+  L D+    + +A+ R L HE + RILG R+FY 
Sbjct: 34  APRDARLLLQGLLGIDGTALLTRPEQPLGDKA-ALIGDAVRRRLAHEPVTRILGVREFYG 92

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D  +PRP+TE +V+ AL            ++I D+GTG+G +   LL E P  
Sbjct: 93  REFIVTPDVLDPRPDTETVVELALEIVRANGLTSAPLQIADIGTGSGILIATLLLELPNA 152

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GV  DIS  AL +A+ NA   G+++R   + +       G FD+IVSNPPYI    +  
Sbjct: 153 RGVATDISTAALAVAERNAKRLGLADRTSFVATHSLDGCAGPFDLIVSNPPYIREADIPG 212

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD+DP+++LDGG DGL  YR IA      L       +E+G  Q  DV  IF + 
Sbjct: 213 LEPEVRDYDPQLALDGGADGLDVYREIAKVARNPLRPM-RLVLEVGAGQASDVTDIFRAA 271

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD GG+DR +
Sbjct: 272 GWRPLGRQKDLGGHDRAV 289


>gi|262279541|ref|ZP_06057326.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
 gi|262259892|gb|EEY78625.1| methyl transferase [Acinetobacter calcoaceticus RUH2202]
          Length = 270

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 81/255 (31%), Positives = 124/255 (48%), Gaps = 10/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTTQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L+ +LP+        I+DLGTGTGA+ LAL  E P ++    D
Sbjct: 83  SDTLVPRPDTEVLVETVLSLNLPK-----NANIVDLGTGTGAIALALASEHPDWQVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA T+G+  +       WF +++   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLEVAKENAQTHGLQ-QVKFACGAWFDALDKQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHKGLADIEIIIAQGKNWLKPQGWIALEHGYDQGHAVRNIFAEHGFSQI 253

Query: 248 NAFKDYGGNDRVLLF 262
              +DYG NDRV L 
Sbjct: 254 KTIQDYGQNDRVTLA 268


>gi|149204049|ref|ZP_01881017.1| Putative methylase [Roseovarius sp. TM1035]
 gi|149142491|gb|EDM30536.1| Putative methylase [Roseovarius sp. TM1035]
          Length = 285

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/258 (37%), Positives = 134/258 (51%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+ + L    GL+  ++ +     LD          I R    E + +ILG R F+ 
Sbjct: 22  AAGDARALLAGAVGLARDRLTLHLGEDLDAAALARFEAMIARRAAREPVAKILGRRVFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++D  +PRPETE L+  ALA           + +LDLGTG+G + + LL E P  
Sbjct: 82  REFEVTADVLDPRPETECLIFEALA-------GPKPLTLLDLGTGSGILAVTLLAEWPDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  D+S  AL++A  NA  +GV+ R    +SDWF+ V G+FD+IVSNPPYI +  +  
Sbjct: 135 GGVATDVSDAALDVATRNAARHGVAGRLTLSRSDWFARVAGVFDLIVSNPPYIAAAEMAG 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ DPR +L    DGL+ YR IA G   HL+  G   VEIG+ Q   V  +  + 
Sbjct: 195 LMPEVREHDPRGALTDEADGLTAYRAIAAGAGAHLSPGGRLMVEIGWKQGPAVADLLCAE 254

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V    D  G DRV+
Sbjct: 255 GFDAVTIRPDLEGRDRVV 272


>gi|326790731|ref|YP_004308552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium lentocellum DSM 5427]
 gi|326541495|gb|ADZ83354.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium lentocellum DSM 5427]
          Length = 290

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 6/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  D+   +  V   +  Q++++    LD+  +    + I +      + ++ G ++F 
Sbjct: 27  DSAIDAKLLMKYVLAFNETQLLLERQKRLDEGMQQIYKSLIEKRSSGIPLQQLTGTQEFM 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE L++  L  +    +     R +D+GTG+G + + L      
Sbjct: 87  GLEFQVNEHVLIPRQDTETLIEELLEQN----KNFSFKRGIDIGTGSGCISITLAYYIKE 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                +DIS +AL++A+ N   + + +R  TL+SD   +   E   D+IVSNPPYI    
Sbjct: 143 LTMCAIDISEEALKVARHNIQKHDLEKRIYTLKSDVLENYAEEEKVDLIVSNPPYISKEE 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L +EV   +PR +L    DGLS Y+ I+     +L K G+ + EIGYNQ   V  I 
Sbjct: 203 VETLMIEVIGHEPREALTDEGDGLSFYKRISKAAKSYLKKGGVIAYEIGYNQGKAVTTIL 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +      V    D  GNDRV+   
Sbjct: 263 KEEGYSDVKLLPDLSGNDRVITAR 286


>gi|239999900|ref|ZP_04719824.1| HemK [Neisseria gonorrhoeae 35/02]
          Length = 273

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY  R 
Sbjct: 16  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGRRF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 76  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 130 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  +    
Sbjct: 188 SQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAEN 246

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V    D  G DRV L 
Sbjct: 247 GFSGVEILPDLVGLDRVTLG 266


>gi|213617487|ref|ZP_03372313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
          Length = 262

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/250 (34%), Positives = 121/250 (48%), Gaps = 8/250 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L   + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKRRTYIMAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L    +G++    I D   + L   G   +E G+ Q   V   F  
Sbjct: 194 LSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRR 252

Query: 242 RKLFLVNAFK 251
                V   +
Sbjct: 253 SGYTDVETCR 262


>gi|331266423|ref|YP_004326053.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5]
 gi|326683095|emb|CBZ00713.1| protoporphyrinogen oxidase [Streptococcus oralis Uo5]
          Length = 278

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + +  F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEEENQFVEEIYQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PET+ LV+  LA +      ++ ++ILD+GTG+GA+ L L K  P +     DIS  ALE
Sbjct: 93  PETKELVELILAEN-----AKESLKILDIGTGSGAIALGLAKNRPDWSVTAADISQDALE 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPDLFRKNLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|302334926|ref|YP_003800133.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Olsenella uli DSM 7084]
 gi|301318766|gb|ADK67253.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Olsenella uli DSM 7084]
          Length = 524

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 5/263 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  VTGLS  Q+    D  L   +   + +A+VR    E +  + G   F ++ L 
Sbjct: 33  AEWMLSNVTGLSRVQLYTSFDRPLSADELARMHDAVVRRGAGEPLQYVTGEMPFRHIVLH 92

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
                  PRPETE+LVD+ LA            ++L++GTGTG +  ++  E P    V 
Sbjct: 93  CEGGVLIPRPETEVLVDAVLAHVDVAAAAGHDAQVLEVGTGTGCIACSIASERPGSHVVA 152

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDC 182
            D+S  A  +A  N    G++   D +  D  S    +++G FDV+VSNPPYI S +V  
Sbjct: 153 TDLSPAAAALAMRNRDALGLARAVDVITCDLASGVDPALKGTFDVLVSNPPYIPSDVVPT 212

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  F+P ++LDGG DGL  +R + +     L   G+ + E+          +   +
Sbjct: 213 LPREVVGFEPHLALDGGADGLDVFRRLLEVAPDMLRPGGMLACELFETNAEVAAELCRRQ 272

Query: 243 -KLFLVNAFKDYGGNDRVLLFCR 264
                V   +D     RVL+  R
Sbjct: 273 GGWARVEVREDLTHRPRVLVAVR 295


>gi|171319080|ref|ZP_02908204.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MEX-5]
 gi|171095719|gb|EDT40675.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MEX-5]
          Length = 280

 Score =  269 bits (688), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 11/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ L+            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHAFGWTRTQLITRGDAPLEPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGALHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+Q   V  + 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAYLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            SR    V +  D    +R     R
Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278


>gi|288905237|ref|YP_003430459.1| methyltransferase [Streptococcus gallolyticus UCN34]
 gi|306831308|ref|ZP_07464468.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325978213|ref|YP_004287929.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
 gi|288731963|emb|CBI13528.1| putative methyltransferase [Streptococcus gallolyticus UCN34]
 gi|304426544|gb|EFM29656.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|325178141|emb|CBZ48185.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           ATCC BAA-2069]
          Length = 276

 Score =  269 bits (688), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 125/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G +    I+  +  + ++ +  L   + +  +H S   I G   F ++ L++      PR
Sbjct: 33  GWTLLDFILHQNQAITEKDQMLLEQIMAQLTEHRSPQYITGKAYFRDLELSVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +      R  +R+LD+GTG+GA+ ++L    P ++    DIS  AL+
Sbjct: 93  PETEELVDLVLKEN-----SRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQ 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +AK NA+ N V      +QSD FS +   FD+I+SNPPYI     D +G+ V   +P ++
Sbjct: 148 LAKENALKNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG + YR I +  S HL ++G    EIGY Q   +  +         V   KD  
Sbjct: 206 LFADEDGFAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKRVRVIKDMF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVM 273


>gi|319787973|ref|YP_004147448.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466485|gb|ADV28217.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 279

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 116/263 (44%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L          +    D  +D  +       + R L  E +  + G R F+ 
Sbjct: 21  PREDAEPLLLHALQQDRAWLFAHGDDPVDPAKAEAYRALLGRRLAGEPVAYLTGHRGFWT 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L  + +T  PRPETELLV+ AL     R+   + VR+ DLGTGTGA+ LA+  E P  
Sbjct: 81  LDLETTPETLIPRPETELLVELALG----RLPVDEPVRVADLGTGTGAIALAIASERPLA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V  D++   L +A  NA  NGV       + DW  ++    FD++ SNPPYI      
Sbjct: 137 AVVATDVAKATLAVAVRNAQANGVG-NVWFRRGDWCQALGRDRFDLVASNPPYIAEGDRH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R  +P  +L  G DGL   RTI      HL   G   +E GY+Q   V  + E 
Sbjct: 196 LSEGDLR-HEPARALSSGADGLDAIRTIVATAPDHLVPGGWLLLEHGYDQGAAVRALLEQ 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   +D    DRV L  R
Sbjct: 255 AGFVEVATAQDLEQRDRVSLGRR 277


>gi|206558778|ref|YP_002229538.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315]
 gi|198034815|emb|CAR50683.1| protein methyltransferase HemK [Burkholderia cenocepacia J2315]
          Length = 280

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LD            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     ++R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVAQRNADKLLDAQRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  I 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGAHLKPGGTLWIEHGYDQAEAVRAIL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 VSHGFVAVESLTDLAAIERTT 274


>gi|330941683|gb|EGH44458.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 277

 Score =  268 bits (687), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 79/250 (31%), Positives = 122/250 (48%), Gaps = 7/250 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++           + R  K E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVSTEAAVAFAGYMERRRKGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV++AL      +      ++LDLGTGTGA+ LAL  E   +K   VD   +A+ 
Sbjct: 92  PETEKLVEAALEL----VPAFAPAQVLDLGTGTGAIALALANERQQWKVTAVDRVPEAVA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +    +  +S W S ++G  FD+I+SNPPYI          +VR F+P  
Sbjct: 148 LAERNRQRLQL-NNAEVFESHWLSGLQGRQFDLIISNPPYISDADPHLSAGDVR-FEPSS 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   RTI +    HLN DG   +E GY+Q   V  +   +    +   +D G
Sbjct: 206 ALVAGSDGLDDLRTIIEQAPAHLNVDGWLLLEHGYDQGPAVRELLIRQGFERIQTRRDLG 265

Query: 255 GNDRVLLFCR 264
            ++R+   C+
Sbjct: 266 EHERITFGCK 275


>gi|299769518|ref|YP_003731544.1| methylase of polypeptide chain release factor [Acinetobacter sp.
           DR1]
 gi|298699606|gb|ADI90171.1| methylase of polypeptide chain release factor [Acinetobacter sp.
           DR1]
          Length = 271

 Score =  268 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 122/256 (47%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEILVETVLNLTLP-----NTANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA+ + +  R       WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLEVAKENALAHNLQ-RVKFACGAWFEALEPQKFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNIFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
              +DYG NDRV L C
Sbjct: 254 KTIQDYGQNDRVTLAC 269


>gi|226940812|ref|YP_002795886.1| HemK1 [Laribacter hongkongensis HLHK9]
 gi|226715739|gb|ACO74877.1| HemK1 [Laribacter hongkongensis HLHK9]
          Length = 276

 Score =  268 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 125/262 (47%), Gaps = 11/262 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+H  L + +GLS  + I  P+  + +           R L  E +  +LG R+F+  
Sbjct: 17  RLDAHLLLEQASGLSRTRQITWPEQEVPEETAQRFLALAARRLAGEPVAYLLGVREFFGR 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ DT  PRPETE LV+ AL             R+LDLGTG+GA+ + +  E P  +
Sbjct: 77  DFRVTPDTLIPRPETEHLVEFALTHL------PPAGRMLDLGTGSGAIAVTVACERPDAR 130

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
              +D+S  AL +A+SN        R   L+SDWFS++  E  F++IVSNPPYI +    
Sbjct: 131 VTALDVSAAALAVARSNGQHLQAQVR--WLESDWFSALPAEERFELIVSNPPYIAAGDPH 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P  +L    DGL   + +A      +   G  +VE GY+Q      +F  
Sbjct: 189 LEQGDLR-FEPASALTDFADGLEALQVLATQACHFVTPGGWLAVEHGYDQGKACRALFAG 247

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V+   D  G DRV +  
Sbjct: 248 AGWLSVSTLPDLAGLDRVTVGQ 269


>gi|270292698|ref|ZP_06198909.1| N5 glutamine methyltransferase, release factor-specific protein
           [Streptococcus sp. M143]
 gi|270278677|gb|EFA24523.1| N5 glutamine methyltransferase, release factor-specific protein
           [Streptococcus sp. M143]
          Length = 278

 Score =  268 bits (687), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + ++ F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEEEKQFVEEIFQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +       + +++LD+GTG+GA+ LAL K  P +    VDIS  AL+
Sbjct: 93  PETEELVELILAEN-----SDENLKVLDIGTGSGAIALALAKNRPDWSVTAVDISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA     + +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LATENAK--VQNFQIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+     L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDFLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|148546008|ref|YP_001266110.1| HemK family modification methylase [Pseudomonas putida F1]
 gi|148510066|gb|ABQ76926.1| modification methylase, HemK family [Pseudomonas putida F1]
          Length = 276

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAETYAGYLQRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     ++LDLGTGTGA+ LAL  E P ++   VD   +A  
Sbjct: 92  PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G++       S WF S+ G  FD+IVSNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R IA     HL   G   +E GY+Q   V  +        V +  D G
Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERITLGR 273


>gi|107024141|ref|YP_622468.1| HemK family modification methylase [Burkholderia cenocepacia AU
           1054]
 gi|116688533|ref|YP_834156.1| HemK family modification methylase [Burkholderia cenocepacia
           HI2424]
 gi|105894330|gb|ABF77495.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116646622|gb|ABK07263.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia HI2424]
          Length = 280

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LD            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDAPLDAAAVERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPHAAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVAQRNADKLLDAHRPGGPLHWLQSDWYAALDPALGFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  R I  G   +L   G   +E GY+Q   V  I 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRAIVAGAGAYLKPGGTLWIEHGYDQAEAVRAIL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFVAVESLADLAAIERTT 274


>gi|313497100|gb|ADR58466.1| HemK family modification methylase [Pseudomonas putida BIRD-1]
          Length = 276

 Score =  268 bits (686), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAETYAGYLKRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     ++LDLGTGTGA+ LAL  E P ++   VD   +A  
Sbjct: 92  PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G++       S WF S+ G  FD+IVSNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAGERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R IA     HL   G   +E GY+Q   V  +        V +  D G
Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERITLGR 273


>gi|302392965|ref|YP_003828785.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetohalobium arabaticum DSM 5501]
 gi|302205042|gb|ADL13720.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acetohalobium arabaticum DSM 5501]
          Length = 307

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 8/269 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  +   ++ V+ D  L + +       +++  K   +  I+G+++F +
Sbjct: 26  ARLDAEVLLADLLDMERIKLYVNFDRPLTEVEINQYRQRVIQRAKRMPVAYIIGYQEFMS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  ++ D   PRPETE LV++ +       +KR+ + ++DL TG+GA+ ++L KE    
Sbjct: 86  LKFKVNEDVLIPRPETEHLVEAVIQRVNKLADKREKLTVIDLCTGSGAIIISLAKELADV 145

Query: 123 ----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175
                 +G D+S +AL +AK NA  + V  +   L  D  + V+      D+I+SNPPYI
Sbjct: 146 PLEINYIGTDVSQEALAVAKDNAKLHQVQNQIQFLVGDLLNPVKELNLKPDIIISNPPYI 205

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L  E   ++P I+L  G +G+  YR I     + L   G+   E+G  Q   V
Sbjct: 206 ADKELQELEPE-LQYEPEIALKAGENGIDFYRQIISETEQLLTDGGIIGFEVGNQQSKSV 264

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++ E      +    DY    RV+L  +
Sbjct: 265 YQLLEENNFINLTVIDDYAEVPRVILGEK 293


>gi|53804791|ref|YP_113525.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
 gi|53758552|gb|AAU92843.1| protein methyltransferase HemK [Methylococcus capsulatus str. Bath]
          Length = 284

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 8/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G +   +   P+ +L   +      +I    +   +  + G R+F++
Sbjct: 23  ARLDAEVLLAHVIGKNRAYLRAWPERLLQADEERRFLASIAARARGVPVAYLTGVREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +  D   PRPETELLV+ A+  +     +R+  RILDLGTG+G + + L  E P  
Sbjct: 83  RSFKVCPDVLIPRPETELLVELAVEAAC----RRNRPRILDLGTGSGVIAVTLALECPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   VD+S  AL +A+ NA   G ++    L+ DWF+ +     FD+IVSNPPY+     
Sbjct: 139 EVWAVDVSESALAVARHNAAALG-AKTVRFLRGDWFAPLPADIRFDLIVSNPPYVSPSDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  ++R ++PR +L    DGL     IAD     L  DG   +E G++Q   V RI  
Sbjct: 198 HLLRGDLR-YEPRQALVSVKDGLHDIALIADNAGPRLLPDGGLMIEHGFDQADAVARILG 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V   +D  G++RV    R
Sbjct: 257 KAGYRDVRHHRDLQGHERVTSALR 280


>gi|172059500|ref|YP_001807152.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MC40-6]
 gi|171992017|gb|ACB62936.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia ambifaria MC40-6]
          Length = 280

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 127/265 (47%), Gaps = 11/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LD            R +  E + +++G R+F+    
Sbjct: 19  DARVLLAYALGWTRTQLITRGDAPLDPASIERYRALEARRVAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+ R    +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGRPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALDVARRNADKLLDARRPGGPLHWLQSDWYAALDPALAFDTIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI       L   G   +E GY+Q   V  + 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVASAGAFLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            SR    V +  D    +R     R
Sbjct: 254 VSRGFVAVESLADLAAIERTTGGRR 278


>gi|167627297|ref|YP_001677797.1| HemK family modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597298|gb|ABZ87296.1| modification methylase, HemK family [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 285

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 134/261 (51%), Gaps = 6/261 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD+     +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYLNSDKHLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L       +K   ++ILDLGTG+GA+ LAL +E P  +
Sbjct: 85  KLYVTKDTLIPRADTEAVVAAVLDDIQ---DKNAQLKILDLGTGSGAIALALAEELPKSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            V VD+  K L++AK NA+ N +    + +QS W+ +++   FD+IVSNPPYI+ V    
Sbjct: 142 VVAVDLYSKTLDVAKKNALANKI-VNVEFMQSSWYENLDATKFDIIVSNPPYID-VDDAN 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   VR+ +P  +L    +GL+  R I    S  L + G   +E G+ Q  D+  IF   
Sbjct: 200 IDDSVREHEPSKALFAADNGLADIRIIISQASGFLKQGGYLYIEHGFTQANDIANIFSHY 259

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               +   KD    DR     
Sbjct: 260 SFGDIQTIKDLNHKDRCTKAR 280


>gi|24375322|ref|NP_719365.1| hemK family protein [Shewanella oneidensis MR-1]
 gi|24350135|gb|AAN56809.1|AE015816_6 hemK family protein [Shewanella oneidensis MR-1]
          Length = 286

 Score =  268 bits (686), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L      +   +   P+  L   Q       + R  +   +  I+G R+F++
Sbjct: 25  AHLDAEVLLLYCLNKNRAYLYTWPEKALSVEQWKRFQQMVQRRQQGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV+SAL      +      ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVESAL-----NLPLESNAKVLDLGTGTGAIALALASERAAW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +AK+N  TN   E+ + LQSDWFS+V    FD+IVSNPPYI+     
Sbjct: 140 QITAVDKVEDAVALAKAN-RTNLKLEQVEILQSDWFSAVTSHDFDLIVSNPPYIDEADEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAADEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRAKLIE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYQNVATVRDFGSNDRCTMG 278


>gi|120612309|ref|YP_971987.1| HemK family modification methylase [Acidovorax citrulli AAC00-1]
 gi|120590773|gb|ABM34213.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax
           citrulli AAC00-1]
          Length = 311

 Score =  268 bits (685), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L    G        ++   +  L   ++        R    E +  + G ++
Sbjct: 27  ARIDAQLLLLHTLGRPDAGRAWLLAHDEDRLSAEEQQGFDALCARRQAGEPVAYLTGRKE 86

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE LVD AL    P      + R+ DLGTG+GA+ LAL    
Sbjct: 87  FYGLPLQVDARVLDPRPDTETLVDWALEVLRPL----PLPRVADLGTGSGAIALALRHGL 142

Query: 120 PFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           P  + V  VD S  AL +A++NA    +S   D ++++W   + G FD IVSNPPYIE  
Sbjct: 143 PGAQVVLAVDASADALAVARANARRLHLS--VDFVRTNWLDGISGPFDAIVSNPPYIEED 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                       +PR +L  G DGL   RTI    S  L   G   +E G+NQ   V  +
Sbjct: 201 DPHL---AALVHEPRQALASGPDGLDDIRTIVVQSSSRLAPGGWLLLEHGWNQAQAVQAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
             +     V +  D  G+ R  
Sbjct: 258 LRNAGYAEVQSRADLAGHARCT 279


>gi|299132854|ref|ZP_07026049.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Afipia sp. 1NLS2]
 gi|298592991|gb|EFI53191.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Afipia sp. 1NLS2]
          Length = 292

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 96/263 (36%), Positives = 140/263 (53%), Gaps = 1/263 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V  L    +I      L+  +   L + + R +  E I RILG ++F+ 
Sbjct: 27  PELDARLLLGDVLQLDLTGLIAAAARTLNANETAALESRVQRRIDGEPIARILGHKEFWG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +  TLS  T  PRP+TE +V++AL          D + I D+GTG+GA+ LALL E P  
Sbjct: 87  LSFTLSPATLVPRPDTETIVEAALDILKQDGRLNDALHISDIGTGSGAILLALLSELPNA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G DI+  A+  A  NA   G++ R   ++ ++  ++ G FD+IVSNPPYI S  +D 
Sbjct: 147 QGIGTDINPDAIHTATRNAAALGLNGRARFIECNYADALRGPFDLIVSNPPYIPSRDIDD 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L +EVR  DPR++LDGG DGL  YR IA      L   G+  +EIG  Q+ DV R+    
Sbjct: 207 LAIEVRAHDPRLALDGGPDGLDAYRVIAPAAFELLVPGGVVILEIGQGQERDVARLTAGA 266

Query: 243 KL-FLVNAFKDYGGNDRVLLFCR 264
            L   V+   D G   R ++  +
Sbjct: 267 GLDAEVSVKADLGRIPRAVIGRK 289


>gi|332360426|gb|EGJ38237.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK355]
          Length = 276

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +  ++R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNELSFTDFVLKLRTEVSQKERDQLKVIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA   G++     +QSD   +++G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSEDALSLAAENAQNCGLNP--TFVQSDCLDTIQGKFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPNMALFAEEDGYAVYRKIAEQAGGYLTEKGKIYLEIGYKQGEGVAELL 249

Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKFFPHKRIRVLKDQFGKDRMV 271


>gi|221068958|ref|ZP_03545063.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
 gi|220713981|gb|EED69349.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
          Length = 291

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 114/267 (42%), Gaps = 14/267 (5%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L  +          +I      L   Q+           +   +  + G ++
Sbjct: 30  ARVDAQMLLLHLMRQPAHARAWLITHDSDALSQEQQQRWGQLCALRQQGMPVAYLTGSKE 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + S   +PRP+TE LVD AL      I +   VR++DLGTG+GA+ LAL  + 
Sbjct: 90  FYGLDLAVDSRVLDPRPDTETLVDWALEL----IPEGQPVRVVDLGTGSGAIALALQSQR 145

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
           P  + + VD S  AL +A+SNA    +          W   ++G    D+IVSNPPYI +
Sbjct: 146 PSARVIAVDASADALAVARSNAARLQLP--VQLAHGSWLEPLDGLEPVDLIVSNPPYIRA 203

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                        +P  +L  G DGL   R+I D     L   G    E G++Q  DV R
Sbjct: 204 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAR 260

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + ++     V    D  G  R    CR
Sbjct: 261 LMQAAGFEQVQHRHDLAGIARCTGACR 287


>gi|332366922|gb|EGJ44663.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1059]
          Length = 276

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         V +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIGTGSGAIALALANNR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+      ++SD   +++  FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSEDALALATENAQSCGL--NLTFVRSDCLDAIQEKFDIIVSNPPYISEED 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPKKRIRVLKDQFGKDRMV 271


>gi|30249864|ref|NP_841934.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718]
 gi|30180901|emb|CAD85823.1| hemK_fam: modification methylase [Nitrosomonas europaea ATCC 19718]
          Length = 289

 Score =  268 bits (685), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 7/256 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V    +  +I   + +L   Q       + R +  E +  + G R FY++  
Sbjct: 35  DARWILQSVLNTDAAFLIAHAEQLLSTDQVAHFRQMLARRIAGEPVAYLTGERGFYDLVF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV+ AL     +I       +LDLGTG+GA+ + L +        
Sbjct: 95  EVTPDVLIPRPETELLVEMAL----SKIPSDRKCNVLDLGTGSGAIAITLARHRASTCVT 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            VD S  A+ +A+ NA  + V      +++DWFSS     FDVIV+NPPY+ +       
Sbjct: 151 AVDFSPGAMAVARRNARMHAVK-NVVFIEADWFSSFTSEKFDVIVANPPYVAAGDPHLEE 209

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L    +GL   RTI      +L   G   +E GY+Q      +      
Sbjct: 210 GDLR-FEPLTALVAQDNGLDCIRTIIAQAPGYLEPSGWLMLEHGYDQADVCRELLAKAGF 268

Query: 245 FLVNAFKDYGGNDRVL 260
             +    D  G DRV 
Sbjct: 269 THLFTRPDIAGTDRVT 284


>gi|332200608|gb|EGJ14680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA41317]
          Length = 279

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|322374350|ref|ZP_08048864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C300]
 gi|321279850|gb|EFX56889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C300]
          Length = 278

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + ++ F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEAEKQFVEEIFQQLASHKPAQYIIGQADFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +       D +++LD+GTG+GA+ L L K  P +     DIS  ALE
Sbjct: 93  PETEELVELILAEN-----PEDKLKVLDIGTGSGAIALGLAKNRPDWSVTAADISQDALE 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|219670828|ref|YP_002461263.1| modification methylase, HemK family [Desulfitobacterium hafniense
           DCB-2]
 gi|219541088|gb|ACL22827.1| modification methylase, HemK family [Desulfitobacterium hafniense
           DCB-2]
          Length = 285

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 76/269 (28%), Positives = 122/269 (45%), Gaps = 11/269 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  +  L   Q+ ++ +  L   Q       I R  + E +  I+  ++F 
Sbjct: 21  NPRWDADLLLGHILSLRREQLYLEREQTLGPEQEAAYQQMISRRARREPLQYIVKHQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA------FSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            +   +      PR +TE+LV+  L        S  R    +   I DL TG+GA+ +++
Sbjct: 81  GLDFYVDERVLIPRADTEILVEKVLELKKEWQHSADRGGSEESPHIADLCTGSGALAISI 140

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
               P  + VG D+S  AL++A+ N    GV  R    Q D+   + G  +D+IVSNPPY
Sbjct: 141 AHFWPQAEVVGTDLSRDALDVARFNGERLGV--RIQWRQGDFLEPLRGDSWDLIVSNPPY 198

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +       L  E+   +PR++  GG DGL  YR +A      L + G+  +EIG+ Q   
Sbjct: 199 VTQAEYGELAPELAK-EPRMAFLGGADGLDFYRELAREGRSLLREKGIILMEIGWQQGNS 257

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           V  +F+ +        +D GG DRV+   
Sbjct: 258 VAELFQQQGFQT-QILQDLGGRDRVVFAR 285


>gi|322376709|ref|ZP_08051202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. M334]
 gi|321282516|gb|EFX59523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. M334]
          Length = 278

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + ++ F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEEEKQFVKEIYQQLAAHKPAQYIIGHADFFGMQLIVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L  +       + + +LD+GTG+GA+ LAL K  P +     DIS +ALE
Sbjct: 93  PETEELVEIILDEN-----HEENLSVLDIGTGSGAIALALSKNRPDWSVTAADISQEALE 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|294785108|ref|ZP_06750396.1| methyltransferase [Fusobacterium sp. 3_1_27]
 gi|294486822|gb|EFG34184.1| methyltransferase [Fusobacterium sp. 3_1_27]
          Length = 383

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  +S + +       + +  +  +    ++R+ K + +  ILG  +FY
Sbjct: 104 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E   
Sbjct: 164 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N +    + ++S+ F  ++    +D+IVSNPPYI    
Sbjct: 220 SSVTGIDINEKAIELANENKTLNKIK-NINFVKSNLFEKIDKDFKYDLIVSNPPYISKNE 278

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +I 
Sbjct: 279 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 338

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGNDRV++  +
Sbjct: 339 QNNNFDVLSVIKDYGGNDRVIIAKK 363



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 18/45 (40%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  + + + + ++
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 66


>gi|260494287|ref|ZP_05814418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_33]
 gi|260198433|gb|EEW95949.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_33]
          Length = 383

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 138/265 (52%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  ++ + +       + +  +  +    ++R+ K + +  ILG  +FY
Sbjct: 104 PLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E   
Sbjct: 164 GLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N + E  + ++S+ F  ++    +D+IVSNPPYI    
Sbjct: 220 SSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKEE 278

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +I 
Sbjct: 279 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 338

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGNDRV++  +
Sbjct: 339 QNNNFDILSVIKDYGGNDRVVIAKK 363



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 17/45 (37%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  +   + + ++
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66


>gi|332075635|gb|EGI86103.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA17545]
          Length = 279

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY ++L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQEDFYGMQLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  LA +         + +LD+GTG+GA+ LAL K  P +     DIS  AL
Sbjct: 93  RPETEELVELILAEN-----SETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DVANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR I +    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIVEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKHVRTLKDQ 265

Query: 254 GGNDRVLLF 262
            G DR+++ 
Sbjct: 266 FGQDRMVVI 274


>gi|327538346|gb|EGF25019.1| modification methylase, HemK family [Rhodopirellula baltica WH47]
          Length = 296

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 127/265 (47%), Gaps = 3/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G    ++    D V ++ QR      + R  +   + +++G+R+FY+
Sbjct: 31  PRLDAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYS 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +  +   PRPETE LV  A+     R+  R    +LD+GTG+GA+ +A+ K  P  
Sbjct: 91  ISIRVDENVLVPRPETEHLVIEAIDQIKGRMSDRPSPTVLDIGTGSGAIAVAIAKSLPKT 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +   VDIS  AL+IAK N     +S+R   LQSD F  +E    FDVI SNPPYI     
Sbjct: 151 QVTAVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEY 210

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L   VR+F+PR +L  G DG      +     + LN  G   +E+          + E
Sbjct: 211 DELPTTVREFEPRGALLSGPDGTEIIARLLTDSVQRLNDGGQLIIELSPMIAGVCKTLAE 270

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
                  ++  KD  G++R+L   +
Sbjct: 271 QNGGYQEIHLIKDLAGHERILSMQK 295


>gi|194336187|ref|YP_002017981.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308664|gb|ACF43364.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pelodictyon phaeoclathratiforme BU-1]
          Length = 299

 Score =  268 bits (685), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 119/261 (45%), Gaps = 8/261 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V G S  ++ +  +  +   +         + ++   +  + G + FY ++  
Sbjct: 35  AELLLGHVLGKSRLELYLHHNRPVYQDELDRFRRLCRQRIEGRPVQYLTGEQYFYGLQFF 94

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGV 125
           +      PRPETELLV+  L              +ILD+GTG+G + + L K  P     
Sbjct: 95  VDERVLIPRPETELLVEQVLDALGMTGRGGSRKAKILDIGTGSGCIAVTLAKLFPELTVS 154

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI 179
            +D S +ALE+A+ N + +GV  +   + +D+F         E  +D+IVSNPPYI    
Sbjct: 155 AIDCSLEALEVARINVLKHGVESQVSCIHADFFDEFFATRLPETSYDLIVSNPPYIPVCE 214

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV+ ++P+I+L     G+  Y  IA   ++ L   G    E+  +    V  + 
Sbjct: 215 WEGLQREVKQYEPKIALTT-PQGVECYHAIAAQAAKLLVPGGRLCFELHADAAAVVSELL 273

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+     +   KDY G DR+L
Sbjct: 274 EANGFGGITVTKDYSGLDRIL 294


>gi|262369774|ref|ZP_06063102.1| methyl transferase [Acinetobacter johnsonii SH046]
 gi|262315842|gb|EEY96881.1| methyl transferase [Acinetobacter johnsonii SH046]
          Length = 272

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 88/256 (34%), Positives = 128/256 (50%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L  +T + S  +++  D VL D Q      A+ R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHITKIDSFDLVMKKDQVLTDEQEQAYVAALARIEAGEPLAYVTGSQPFWTLDLIVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PRP+TE+LV++ L   LP     +  RI+DLGTGTGAV L+L  E   +     D
Sbjct: 83  PDTLVPRPDTEVLVETVLRLDLP-----EDARIVDLGTGTGAVALSLACERDTWDITATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEV 187
           I    L +A+ NA  + +++    +   WF+ +   F DVIVSNPPYI++       L  
Sbjct: 138 IYEPTLAVAQQNAEKHDLND-VTFVCGSWFAPLNRKFFDVIVSNPPYIDADDAHMQDLAT 196

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +P  +L     GL+  R I     +HL  DG   +E GY+Q   V +IF+      V
Sbjct: 197 ---EPERALVAADHGLADLRVIIQQGKKHLTLDGWVVLEHGYDQADAVQKIFKEAGYKQV 253

Query: 248 NAFKDYGGNDRVLLFC 263
              KDYGGNDRV L  
Sbjct: 254 RTVKDYGGNDRVTLGQ 269


>gi|323351594|ref|ZP_08087248.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           VMC66]
 gi|322122080|gb|EFX93806.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           VMC66]
          Length = 276

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 128/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA ++G+      +QSD   +++G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSGDALALAAENAQSSGL--NLVFVQSDCLDAIQGKFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKIGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           E       +   KD  G DR++
Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271


>gi|148984975|ref|ZP_01818218.1| HemK protein [Streptococcus pneumoniae SP3-BS71]
 gi|147922673|gb|EDK73790.1| HemK protein [Streptococcus pneumoniae SP3-BS71]
 gi|301799987|emb|CBW32577.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
          Length = 279

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLANENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|146277161|ref|YP_001167320.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555402|gb|ABP70015.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC
           17025]
          Length = 278

 Score =  267 bits (684), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 93/263 (35%), Positives = 138/263 (52%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+   +    G++  ++ +     L          A+      + + +I+G R F+
Sbjct: 21  DAPRDARRLMAHALGIAPDRITLHLPDPLLPEADARFEAALAARTARQPVAQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRPFRVTRDTLDPRPETECLIEAALA--------APFATLLDLGTGTGCIAITLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GV  D+S  AL +A+ NA+  GV++R D  +SDWF++V   FD+I+SNPPYI +  + 
Sbjct: 133 ARGVATDLSPAALAVAEGNALALGVADRLDCRRSDWFAAVPERFDLILSNPPYIAAHEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+++PR++L    DGL  YR I  G S HL   G   +EIG  Q  DV  +  S
Sbjct: 193 ELAPEVREWEPRMALTPEGDGLDAYRAITAGASAHLAPGGRLLLEIGAGQGADVAGLCAS 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V    D  G DR++   R
Sbjct: 253 AGLTEVRILPDLDGRDRLVAARR 275


>gi|322373125|ref|ZP_08047661.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C150]
 gi|321278167|gb|EFX55236.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus sp. C150]
          Length = 277

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
               Q I+     + +     L++   +   H+    ILG+ DF+ +R  +      PRP
Sbjct: 34  WDLTQFILHLRQEVSEEDEKLLSSIFNQLKAHKPAQYILGFEDFHGLRFQVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LV+  LA +      +  +++LD+GTG+GA+ ++L +  P ++    D+S  ALE+
Sbjct: 94  ETEELVELILAEN-----PKTELKVLDIGTGSGAIAVSLKESCPLWQVTASDLSVDALEL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA  N V      +QSD F ++ G FD+IVSNPPYI     + +GL V   +P+++L
Sbjct: 149 ARENAKLNRVD--ISFIQSDVFENISGSFDIIVSNPPYISENDKNEVGLNVLTSEPKLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DGL+ YR I +  ++HL+  G    EIGY Q  D+ ++         V   KD  G
Sbjct: 207 FADEDGLAIYRQIIERAAKHLSPQGKLYFEIGYKQGSDLKKLLSLHFPDKCVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVI 273


>gi|121593272|ref|YP_985168.1| HemK family modification methylase [Acidovorax sp. JS42]
 gi|120605352|gb|ABM41092.1| [protein release factor]-glutamine N5-methyltransferase [Acidovorax
           sp. JS42]
          Length = 280

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 12/257 (4%)

Query: 6   DSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L  V G        ++      L             R  K E +  +LG ++F+ 
Sbjct: 22  DAQMLLLHVLGRAPTDRAWLLAHDGDTLPAAAMEQYAALRARRAKGEPVAYLLGRKEFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++ +   +PRP+TE LV  AL      +  R   R+ DLGTG+GA+ LAL  E P  
Sbjct: 82  LPLSVDARVLDPRPDTETLVAWALEV----LATRAAPRVADLGTGSGAIALALQHERPDA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + + VD S  AL +A++NA   G+  RF  +Q +W   V+G FD IVSNPPYI +     
Sbjct: 138 QVLAVDASAGALAVARANAGQLGLPVRF--IQGNWLHGVDGPFDAIVSNPPYIPAQDPHL 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P  +L  G DGL   RTI       L   G   +E G++Q   V  +    
Sbjct: 196 ---AALTHEPLSALASGADGLEDIRTIVAQAPARLAPGGWLLLEHGWDQAEAVQALLRDA 252

Query: 243 KLFLVNAFKDYGGNDRV 259
               V +  D  G  R 
Sbjct: 253 GFDQVQSRHDLAGIARC 269


>gi|32475816|ref|NP_868810.1| hemK protein [Rhodopirellula baltica SH 1]
 gi|32446359|emb|CAD76187.1| hemK protein [Rhodopirellula baltica SH 1]
          Length = 296

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 3/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G    ++    D V ++ QR      + R  +   + +++G+R+FY+
Sbjct: 31  PRLDAEILLAHARGCQRIELYTSFDKVPEEEQRVAFRELVRRRGEGAPVAQLVGYREFYS 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +  +   PRPETE LV  A+     R+  R    +LD+GTG+GA+ +A+ K  P  
Sbjct: 91  ISIRVDENVLVPRPETEHLVIEAIDQIKGRLSDRPSPTVLDIGTGSGAIAVAIAKSLPKT 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +   VDIS  AL+IAK N     +S+R   LQSD F  +E    FDVI SNPPYI     
Sbjct: 151 QVTAVDISLTALDIAKWNVENLKLSDRVTLLQSDLFDGLEPDQTFDVICSNPPYISQSEY 210

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L   VR+F+PR +L  G DG      + +   + LN  G   +E+          + E
Sbjct: 211 DELPTTVREFEPRGALLSGPDGTEIIARLLNDSVQRLNDGGQLIIELSPMIAGVSKTLAE 270

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
                  ++  KD  G++R+L   +
Sbjct: 271 QNGGYKEIHLIKDLAGHERILSMQK 295


>gi|306829485|ref|ZP_07462675.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC
           6249]
 gi|304428571|gb|EFM31661.1| protein-(glutamine-N5) methyltransferase [Streptococcus mitis ATCC
           6249]
          Length = 278

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      +   +  F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFTLQQEVTKEEENFVEEIYQQLAAHKPAQYIIGQADFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +       + ++ILD+GTG+GA+ LAL K  P +     DIS  ALE
Sbjct: 93  PETEELVDLILTEN-----PEESLKILDIGTGSGAIALALAKNRPDWSVTAADISQVALE 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|157376590|ref|YP_001475190.1| HemK family modification methylase [Shewanella sediminis HAW-EB3]
 gi|157318964|gb|ABV38062.1| modification methylase, HemK family [Shewanella sediminis HAW-EB3]
          Length = 280

 Score =  267 bits (684), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +       +   PD  L   Q       + R L    I  I+G R+F++
Sbjct: 23  PKLDAEVILLHIIHQQRGYLYTWPDERLTSDQVTAFGEMVARRLLGTPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   D  R+LDLGTGTGA+ L+L  E P +
Sbjct: 83  LPFMVNPTTLIPRPDTEILVETAL-----NLPLADSARVLDLGTGTGAIALSLAYEKPEW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N     +  + + +QSDWF SV    F++IVSNPPYI+     
Sbjct: 138 QITAVDKIIEAVALAKANRAHLKLP-QVEIVQSDWFDSVACYDFNLIVSNPPYIDETDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G +G +    IA     +L   G   +E GY Q + + +    
Sbjct: 197 LSQGDVR-FEPQSALTAGEEGFADLYHIASCARDYLAPGGYLLLEHGYQQAIQLRKKMIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277


>gi|253702391|ref|YP_003023580.1| modification methylase, HemK family [Geobacter sp. M21]
 gi|251777241|gb|ACT19822.1| modification methylase, HemK family [Geobacter sp. M21]
          Length = 285

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 127/261 (48%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   LC    L    + ++ D  L D +       + R  + E +  ILG ++F 
Sbjct: 28  NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFM 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV  A+              ILD+GTG+G V +A+ K  P 
Sbjct: 88  GLEFRVTPAVLIPRHDTEVLVTEAVK------RGGACRSILDIGTGSGCVAIAVAKALPE 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VD+S +A+E+A+ NA  NGVS +F   Q   F    G  FD++VSNPPYI S  +
Sbjct: 142 AEVCTVDVSGEAIEVARGNAERNGVSVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRDF+P  +LDGG DGL  YR I  G   HLN  G    E+G  Q  +V+ +  
Sbjct: 200 ASLQQEVRDFEPAGALDGGGDGLDFYRRITAGAPAHLNPGGWLLFEVGAGQAGEVLELLN 259

Query: 241 SRKLFLVNAFK-DYGGNDRVL 260
           S         + D  G +RV+
Sbjct: 260 SGGFTNERFSQTDPAGIERVV 280


>gi|325122702|gb|ADY82225.1| methyl transferase [Acinetobacter calcoaceticus PHEA-2]
          Length = 271

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 121/256 (47%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTVQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEILVETVLNLNLP-----NTANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA  + +  R       WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYVPTLEVAKENAQVHNLQ-RVKFACGAWFDALEPQKFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKDWLKPQGWIALEHGYDQGQAVRNIFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
              +DYG NDRV L C
Sbjct: 254 RTIQDYGQNDRVTLAC 269


>gi|253681154|ref|ZP_04861957.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum D str. 1873]
 gi|253563003|gb|EES92449.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum D str. 1873]
          Length = 282

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 7/263 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + DS   + +V       +I++ +  +  + +      I        +  ILG  +F  +
Sbjct: 23  ILDSQLLIQKVLKKDKLFIILNRNLEISLKDQEEFFKLIKLRKDKMPVKYILGECEFMGL 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +TE+LV+  +      I++     + D+  G+GA+ +++ K      
Sbjct: 83  NFNVKEGVLIPRADTEVLVEEVIK----EIKENGYNNVCDVCCGSGAIGISIGKYIKETI 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
               DIS  A+E+ K+N     ++ +    +SD     +    ++DVIVSNPPYI+  ++
Sbjct: 139 IDCYDISDIAIEVTKNNINKFQLNNKVYVYKSDLLDEAKRQNKMYDVIVSNPPYIKEEVI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V++++P I+L GG DGL  Y  I       LN+ GL + EIGY+Q  +V  I  
Sbjct: 199 PTLMKDVKEYEPYIALCGGKDGLYFYNKITKNSVDFLNRGGLLAFEIGYDQGKEVKDILI 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 +   KD  G DRV++  
Sbjct: 259 ENGFSNIKVIKDLAGLDRVVMGR 281


>gi|255264803|ref|ZP_05344145.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thalassiobium sp. R2A62]
 gi|255107138|gb|EET49812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thalassiobium sp. R2A62]
          Length = 277

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 132/262 (50%), Gaps = 7/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A+RD       V  +S  ++ +     +   Q+  L   I R   HE + +++G R F+
Sbjct: 21  DAVRDIRRLAAHVLQVSPDRMTLHMGDDVTAGQKAQLHVLIARRAAHEPVSKLIGQRAFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE L+++ L             R+LDLGTG+GA+ + L  E   
Sbjct: 81  GRDFAVTPDVLDPRPETECLIEACLG-------AGPAARVLDLGTGSGAIAVTLAAEWDA 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 D+S  AL++A+ NAV + V  R + + SDWF +V+G +D+IVSNPPYI    + 
Sbjct: 134 AAVTATDLSHAALDVARQNAVRHDVGARIEFVGSDWFDAVDGCYDLIVSNPPYIALAEMT 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DPR++L    DGL+ YR I DG    +   G  +VEIG  Q   V  + + 
Sbjct: 194 GLAPEVRGHDPRMALTDEADGLTCYRIICDGALAKMVSGGRLAVEIGPTQGDAVALMMQE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  +    D  G +RV+L  
Sbjct: 254 AGLVEIEIRPDLDGRNRVVLGR 275


>gi|264676910|ref|YP_003276816.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
 gi|262207422|gb|ACY31520.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
          Length = 291

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 14/267 (5%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L  +          +I      L   Q+           +   +  + G ++
Sbjct: 30  ARVDAQMLLLHLMQQPAHARAWLITHDCDALSQEQQQRWDQLCTLRQQGTPVAYLTGNKE 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + S   +PRP+TE LVD AL      + +R  VR++DLGTG+GA+ LAL  + 
Sbjct: 90  FYGLDLAVDSRVLDPRPDTETLVDWALEL----MPERQPVRVIDLGTGSGAIALALQSQR 145

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
           P  + + VD S  AL +A+SNA    +  +F      W   ++G    D+IVSNPPYI +
Sbjct: 146 PSARVIAVDASADALAVARSNAARLQLPVQFA--HGSWLEPLDGLEPVDLIVSNPPYIRA 203

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                        +P  +L  G DGL   R+I D     L   G    E G++Q  DV R
Sbjct: 204 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAR 260

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + ++     V    D  G  R    CR
Sbjct: 261 LMQAAGFEQVQHRHDLAGIARCTGGCR 287


>gi|237742324|ref|ZP_04572805.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429972|gb|EEO40184.1| methyltransferase [Fusobacterium sp. 4_1_13]
          Length = 370

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  +S + +       + +  +  +    ++R+ K + +  ILG  +FY
Sbjct: 91  PLLDTEYIFSDVLKVSRNTLKYSMSREIKEENKDKIREMLVLRAKKRKPLQYILGEWEFY 150

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV+  +       E      ILD+G+GTGA+ +A+  E   
Sbjct: 151 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGTGAISIAIANELKS 206

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N + E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 207 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 265

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DGL  YR I+     HL      + EIGYNQ  DV +I 
Sbjct: 266 YETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEHLKDTAYLAYEIGYNQAKDVTKIL 325

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGNDRV++  +
Sbjct: 326 QNNNFDILSVIKDYGGNDRVVIAKK 350



 Score = 41.2 bits (96), Expect = 0.14,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 18/45 (40%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  + + + + ++
Sbjct: 9  PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNLIKHYLKKMVE 53


>gi|184158673|ref|YP_001847012.1| methylase of polypeptide chain release factor [Acinetobacter
           baumannii ACICU]
 gi|332874368|ref|ZP_08442279.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6014059]
 gi|183210267|gb|ACC57665.1| Methylase of polypeptide chain release factor [Acinetobacter
           baumannii ACICU]
 gi|322507516|gb|ADX02970.1| Methyl transferase [Acinetobacter baumannii 1656-2]
 gi|323518588|gb|ADX92969.1| methylase of polypeptide chain release factor [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332737447|gb|EGJ68363.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6014059]
          Length = 271

 Score =  267 bits (683), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTVQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L++AK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  +F       +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
              +DYG NDRV L C
Sbjct: 254 KTIQDYGQNDRVTLAC 269


>gi|157370233|ref|YP_001478222.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia proteamaculans 568]
 gi|157321997|gb|ABV41094.1| modification methylase, HemK family [Serratia proteamaculans 568]
          Length = 276

 Score =  266 bits (682), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L  VTG +   ++   +++L  +Q+  L   +VR  + E +  ++G R+F++
Sbjct: 20  ARRDAEILLGFVTGRARTFLMAFGETLLTQQQQEQLERLLVRRERGEPVAYLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++S  T  PRP+TE LV+ AL              ILDLGTGTGA+ LAL  E    
Sbjct: 80  LPLSVSPATLIPRPDTECLVELALERL-----PSSSCNILDLGTGTGAIALALASERQDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +  GVD+  +A+ +A+ NA    +      LQ  WF+ + G  F +I SNPPYI++    
Sbjct: 135 RVTGVDLQPEAVALAQHNAQKLAIG-NAQFLQGSWFAPLAGQTFALIASNPPYIDAADPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I     ++L   G   +E G+ Q   V  + ++
Sbjct: 194 LAQGDVR-FEPSSALVAQQHGLADLSAIVQQAPQYLQPQGWLLLEHGWQQGESVRALLQA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   +DYG NDRV    
Sbjct: 253 AGFISIATRRDYGDNDRVTFGQ 274


>gi|83644570|ref|YP_433005.1| methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
 gi|83632613|gb|ABC28580.1| Methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
          Length = 276

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G     +I   DSVLD+         I        +  ++G R+F++
Sbjct: 19  PRLDAEVLLAHVLGKGRTYLISHNDSVLDEPALQAYQRLIAERETGRPVAHLIGKREFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S  T  PRPET       L   +         ++LDLGTGTGA+  AL  E P +
Sbjct: 79  LEFQVSPATLIPRPET-----ELLVELVLEEAAPAGAKVLDLGTGTGAIACALAHERPDW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +   VD+S +A+E+A +N ++ G++     L+S+W+ +V +  F VIVSNPPYI+++ + 
Sbjct: 134 RFTAVDVSQEAVELATTNVLSLGLT-NVRCLRSNWYDAVGDEQFHVIVSNPPYIDALDIH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R IA G  RHL   GL +VE GY+Q      IF +
Sbjct: 193 LTQGDVR-FEPASALVAADHGLADIRMIAAGAGRHLLAGGLLAVEHGYDQGAAAREIFST 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D  G+DR+ L  
Sbjct: 252 AGYVDVRTHQDLAGHDRITLGR 273


>gi|225175857|ref|ZP_03729850.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dethiobacter alkaliphilus AHT 1]
 gi|225168781|gb|EEG77582.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dethiobacter alkaliphilus AHT 1]
          Length = 283

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 5/262 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  R++   L  + G  +  +       L   Q       + R    E    + G ++F 
Sbjct: 23  RPRREAQFLLTALLGCDAAWLYAHDQEKLTAPQWAEFQAWLARRATGEPFAYLAGQKEFM 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PRPETE LV++        ++     RIL++G G+GAV ++L K  P 
Sbjct: 83  GLCFAVTPDVLIPRPETEFLVEAV----AEELQAHTSPRILEIGAGSGAVAVSLAKLLPK 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            + V VD+S  ALEIA+ NA  +GV+ R + L  D ++ V +  FD +VSNPPYI +  +
Sbjct: 139 ARVVAVDVSQAALEIAQKNAARHGVAGRVEFLAGDLYAPVADEYFDAVVSNPPYISAADI 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+DF+PR++L GG DGL  YR +   +    N+  + + E+G  Q   V  +  
Sbjct: 199 LKLQCDVKDFEPRLALCGGEDGLDFYRRLTGELDVLSNRPKMLAFEVGMGQAQAVAALCL 258

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                     KD  G DR++  
Sbjct: 259 KAGYENTRQIKDLAGIDRIITA 280


>gi|189347186|ref|YP_001943715.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium limicola DSM 245]
 gi|189341333|gb|ACD90736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium limicola DSM 245]
          Length = 296

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 6/262 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  + G     + ++ +  +   +           L    +  I+G + FY     
Sbjct: 34  AELLLAHLFGEDRLWLYLNHNRPVSGSELDEFRGLCRDRLDGRPVQYIIGEQFFYGKPFV 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETELLV+ A  F   R       R+LD+GTG+G + + L    P+ +   
Sbjct: 94  VDERVLIPRPETELLVEHAAEFLTTRKPVNPECRLLDIGTGSGCIAVTLAGLFPYLEVTA 153

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVD 181
           +D S  AL++A+ NA   GV +R    Q+D F           FDVIVSNPPYI     D
Sbjct: 154 LDRSEDALDVARGNARKQGVLDRILFFQADMFDPDLVSRFSSPFDVIVSNPPYIPECEWD 213

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR F+P+ +L    DG   Y  I    +  L   G   +EI       V  I  S
Sbjct: 214 GLQKEVRGFEPKDALIT-PDGSDAYLAICRTAALILKPGGALCLEIHAEGAEMVRSIMAS 272

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                ++  KDY G DR++   
Sbjct: 273 EHFGSISVLKDYSGFDRIVSGT 294


>gi|324994441|gb|EGC26354.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK678]
          Length = 276

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 126/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+      +QSD   ++ G FD+IVSNPPYI    
Sbjct: 132 PNWQITASDLSDDALALAAENAQSCGL--NLAFVQSDCLDAISGNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   +  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           E       +   KD  G DR++
Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271


>gi|15616791|ref|NP_240003.1| HemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681546|ref|YP_002467931.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|257471229|ref|ZP_05635228.1| HemK protein [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11132929|sp|P57269|HEMK_BUCAI RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.BusHemKP
 gi|25403559|pir||A84950 hemK protein [imported] - Buchnera sp. (strain APS)
 gi|10038854|dbj|BAB12889.1| hemK protein [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219624389|gb|ACL30544.1| HemK protein [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)]
          Length = 277

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  VT  +   +I   +  L ++Q  +L + I R    E I  I+  ++F+++ L
Sbjct: 23  ESELLLSYVTKHTRSFIISSDEIQLTEKQYKYLNHLIHRRSLGEPIAYIIKEKEFWSLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S DT  PRP+TE+LV+ AL+       K +   ILDLGTG GA+ LAL   +  +  +
Sbjct: 83  CVSYDTLIPRPDTEILVERALSKI-----KSNSACILDLGTGCGAIALALASINSNWNII 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL IA+ NA             SDWF +++  F++IVSNPPY+    +     
Sbjct: 138 GIDKSENALAIARINASKLNFK-NVTFFFSDWFLNIKKKFNIIVSNPPYVSKKEIKFFKK 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++  F+P  +L    +GLS    I      +L   G   +E G+ QKV V  +F+     
Sbjct: 197 DIF-FEPLSALISDNNGLSDIENIIKNSKHYLFYGGWLMIEHGWRQKVKVQYLFKKYNFH 255

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            + +++DYGGNDRV +  +
Sbjct: 256 EIESYQDYGGNDRVTIGKK 274


>gi|197120069|ref|YP_002140496.1| peptide chain release factor methyltransferase [Geobacter
           bemidjiensis Bem]
 gi|197089429|gb|ACH40700.1| peptide chain release factor methyltransferase [Geobacter
           bemidjiensis Bem]
          Length = 285

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   LC    L    + ++ D  L D +       + R  + E +  ILG ++F 
Sbjct: 28  NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELALYRGMVARRGRREPLQYILGSQEFM 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV  A+              ILD+GTG+G V +A+ K  P 
Sbjct: 88  GLEFRVTPAVLIPRHDTEVLVTEAVK------RGEACRSILDIGTGSGCVAVAVAKALPE 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VD+S  A+E+A+ NA  NGV+ +F   Q   F    G  FD++VSNPPYI S  +
Sbjct: 142 AEVFTVDVSADAIEVARGNAERNGVTVQF--FQGSLFEPFAGKRFDMLVSNPPYITSADL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVRDF+P  +LDGG DGL  YR I      +LN  G    E+G  Q  +V+ +  
Sbjct: 200 ATLQQEVRDFEPAGALDGGGDGLDFYRRITADAPAYLNPGGWLLFEVGAGQAGEVLELLN 259

Query: 241 SRKLFLVNAFK-DYGGNDRVL 260
           S         + D  G +RV+
Sbjct: 260 SGGFSNERFSQTDPAGIERVV 280


>gi|325273243|ref|ZP_08139523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
 gi|324101620|gb|EGB99186.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
          Length = 276

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 82/249 (32%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAQTYAGYLQRRRGGEPVAYILGQQGFWKIDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     R+LDLGTGTGA+ LAL  E P ++   VD   +A  
Sbjct: 92  PDTELLVETALE-----LQPAAPARVLDLGTGTGAIALALASERPAWQVTAVDRVAEAAA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +S       S WF S+ G  FD+IVSNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLSLSNT-QVRLSHWFDSLAGERFDLIVSNPPYIAAADPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HL   G   +E GY+Q   V  +   +    V +  D G
Sbjct: 205 ALVAGPDGLDDLRVIVTQAPGHLVPGGWLLLEHGYDQAAAVRALLVEQGFNEVASRTDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERISLGR 273


>gi|317048555|ref|YP_004116203.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Pantoea sp. At-9b]
 gi|316950172|gb|ADU69647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pantoea sp. At-9b]
          Length = 276

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   D++LDD Q   L   + R  + E I  ++G R+F++
Sbjct: 20  PKRDAEILLAFVTGKSRSWLVAFDDALLDDVQLQQLATLLARRAQGEPIAHLVGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE+LV+ ALA             ILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLRVSDATLIPRPDTEVLVEQALAHL-----PATAATILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G D    A+ +A+ NA    ++       S WF+++    FD+I SNPPYI++    
Sbjct: 135 QVTGCDRVEAAVALAQDNAQRLHIT-NVQFFLSHWFAALPSQRFDLIASNPPYIDAADHH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+  R I       L   G   +E G+ Q   V  +   
Sbjct: 194 LQQGDVR-FEPLSALVAEEAGLADLREIITTAPAWLLPGGWLLLEHGWQQGEAVRTLMTQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    VN   DYGGN RV L  
Sbjct: 253 QGYQQVNTVDDYGGNPRVTLGQ 274


>gi|26987470|ref|NP_742895.1| methyl transferase [Pseudomonas putida KT2440]
 gi|24982134|gb|AAN66359.1|AE016264_3 methyl transferase [Pseudomonas putida KT2440]
          Length = 276

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 81/249 (32%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSYLHTWPERIVSSEDAETYAGYLKRRRGGEPVAYILGLQGFWKIDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      ++     ++LDLGTGTGA+ LAL  E P ++   VD   +A  
Sbjct: 92  PDTELLVETALE-----LQPASPAKVLDLGTGTGAIALALASERPAWQVTAVDRVEEAAA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N    G++       S WF S+    FD+IVSNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLGLA-NARVRLSHWFDSLAAERFDLIVSNPPYIAAEDPHLVAGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R IA     HL   G   +E GY+Q   V  +        V +  D G
Sbjct: 205 ALVAGADGLDDLRVIAAQAPAHLLPGGWLLLEHGYDQAAAVRALLAEHGFIEVASRTDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERITLGR 273


>gi|168576250|ref|ZP_02722144.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae MLV-016]
 gi|183577963|gb|EDT98491.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae MLV-016]
          Length = 279

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+G + LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGTIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|91785344|ref|YP_560550.1| modification methylase HemK [Burkholderia xenovorans LB400]
 gi|91689298|gb|ABE32498.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 286

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 128/260 (49%), Gaps = 11/260 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V G    Q+I   D  L             R    E + +++G R+F+ +  
Sbjct: 25  EARILLTHVLGWRPTQLITRSDEPLGAELVERYRALEARRAAGEPVAQLVGAREFFGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  +  
Sbjct: 85  EVTPHVLIPRPETELLVETALA----ALENLSRPRVLDLGTGTGAIAVAIASMRPDAQVW 140

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S +AL +A  NA     ++R        QSDW+ S++    FDVIVSNPPYI S  
Sbjct: 141 ALDHSAEALAVATRNAARLLDAKRPGGAVALTQSDWYDSLDAALRFDVIVSNPPYIASGD 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  R I  G    L   G+  +E GY+Q   V ++ 
Sbjct: 201 PHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVLWIEHGYDQAEAVRKLL 259

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +R    V + +D  G +R+
Sbjct: 260 TARGFTQVRSERDLAGIERI 279


>gi|254448386|ref|ZP_05061847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium HTCC5015]
 gi|198261999|gb|EDY86283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [gamma proteobacterium HTCC5015]
          Length = 275

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 7/257 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC  T  S   +I   +  L+  Q  +  + + R    E I  +LG ++F++
Sbjct: 19  AALDAQLLLCHATNKSRSFLIAHGEEALNAEQAQYFESLVKRRADGEPIAYLLGQQEFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PR +TE L++     SL        + I DLG G+G + L L    P  
Sbjct: 79  LPFEVNPHTLIPRADTESLIEH----SLQLFGPDSTIDIADLGAGSGCIGLTLAHCLPKA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             + V+ S  AL + + N     +      ++S+W   + E  FD+I+SNPPY+      
Sbjct: 135 NVLCVERSRDALAMIEKNRQQLNI-NNAKAIESNWCQDLGEQHFDLIISNPPYVRENDEH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R +A  V +HL   G   VE GY+Q   V RI  +
Sbjct: 194 LDQGDVR-FEPITALTAGADGLDDIRQLATQVPKHLKPQGHFIVEFGYDQSEAVKRILSA 252

Query: 242 RKLFLVNAFKDYGGNDR 258
                +    D GG+ R
Sbjct: 253 AGFQSLTDITDLGGHIR 269


>gi|327474248|gb|EGF19655.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK408]
          Length = 276

 Score =  266 bits (681), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLQTEVSLEDREQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + ILD+GTG+GA+ L L    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    HL K G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271


>gi|258592987|emb|CBE69298.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [NC10 bacterium 'Dutch sediment']
          Length = 297

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 86/279 (30%), Positives = 128/279 (45%), Gaps = 17/279 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +   +G+   Q I+DP+  +   +   L + + R    E +  ILG ++F++
Sbjct: 13  APLDAAYLMEAASGIPRWQFILDPEQPIPLDRSGLLESMVSRREAREPVAYILGVKEFWS 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-----------ILDLGTGTGAV 111
           + L +S D   PRP+TE LV++AL     + +  +              I+DLGTG GAV
Sbjct: 73  LLLAVSPDVLIPRPDTETLVETALDKISVKCQGSETQHSTLNTRHSQLVIVDLGTGCGAV 132

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFD 166
            LAL  E P      +D S  A  IA  N  T G++ R   +Q D           G  D
Sbjct: 133 ALALAVELPRALIYAIDRSPGACRIAGRNIDTLGLTNRVRCVQGDLLEPFRTIDAGGGCD 192

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYI S     L  E+  ++P  ++DGG DGL +YR I +    +L   G    E
Sbjct: 193 LIVSNPPYIPSAACRVLAPEITAYEPVEAIDGGPDGLRYYRRIIEAAPAYLRDGGWLVFE 252

Query: 227 IGYNQKVDVVRIFES-RKLFLVNAFKDYGGNDRVLLFCR 264
           +G  Q   V+ +             +D  G DRV+   R
Sbjct: 253 VGDGQASAVMELIRKTEGFGPAEVRQDMAGRDRVVCAPR 291


>gi|239832946|ref|ZP_04681275.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ochrobactrum intermedium LMG 3301]
 gi|239825213|gb|EEQ96781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ochrobactrum intermedium LMG 3301]
          Length = 290

 Score =  266 bits (680), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 104/259 (40%), Positives = 154/259 (59%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +   TG +   +I  P+ ++D      L +A+ R  K E +HRI+G R+F+ + 
Sbjct: 27  LDARLLVEWATGRTRLDLISAPEQLVDGAAIQTLCDALERRAKGEPVHRIMGVREFFGLP 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS++T EPRP+TE LV+  +       ++ + + +LD+GTGTGA+ ++LL       G
Sbjct: 87  FRLSTETLEPRPDTEALVELVIPALDVLAQQENTLELLDMGTGTGAIIISLLHRFERAHG 146

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG+D++  AL +A+ NA+ NGV +RF  L+SDWF  V G F +IVSNPPYI    +  L 
Sbjct: 147 VGLDMAEGALVMARINAIANGVGDRFAALKSDWFQHVSGRFHLIVSNPPYIPHEDIAGLS 206

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+ DP  +LDGG+DGL+ YR +A   + HL + G+ +VEIG  Q  DV  +FES   
Sbjct: 207 REVREHDPLAALDGGVDGLNFYRALAQKAADHLYRKGMVAVEIGAGQFQDVEALFESAGF 266

Query: 245 FLVNAFKDYGGNDRVLLFC 263
            L     D GG+ R +LF 
Sbjct: 267 SLAGHASDLGGHRRAMLFA 285


>gi|257785107|ref|YP_003180324.1| modification methylase, HemK family [Atopobium parvulum DSM 20469]
 gi|257473614|gb|ACV51733.1| modification methylase, HemK family [Atopobium parvulum DSM 20469]
          Length = 297

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 130/262 (49%), Gaps = 7/262 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  VTGLS  Q+  + D  L   +R  +  AI R  + E +  + G   F ++ LT
Sbjct: 31  AEWLLSAVTGLSRVQLYTNFDKPLSADERARMREAIKRRAEGEPLQYVTGEMPFRHLVLT 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGV 125
                  PRPETE+LVD AL          D  VR+L++G GTG + L++  E P  +  
Sbjct: 91  CEPGVLIPRPETEVLVDVALEGVDASTPNADGEVRVLEVGVGTGCISLSIATERPQTRVY 150

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVD 181
             D+S KA+ +A  N     + +R + ++ D      + +   F V+VSNPPYI + +++
Sbjct: 151 ATDLSPKAIALATRNRDALDLQDRVELIECDLVEGVPAELAQSFSVLVSNPPYIPTSVLE 210

Query: 182 -CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV+ F+P+++LDGG DGL  YR + +   R L   G+  VE+          + E
Sbjct: 211 QEVPAEVKGFEPKLALDGGEDGLDVYRRLLEVAPRMLLPGGMLCVELYEGHLDKAAHLAE 270

Query: 241 SRKLFL-VNAFKDYGGNDRVLL 261
            + ++  V   +D     R+L+
Sbjct: 271 EQGIWESVEVKEDLTHRPRILV 292


>gi|294055590|ref|YP_003549248.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coraliomargarita akajimensis DSM 45221]
 gi|293614923|gb|ADE55078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coraliomargarita akajimensis DSM 45221]
          Length = 280

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 122/262 (46%), Gaps = 7/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   +    G+    + +D +  L D Q   L   + R    E +  ILG  +F 
Sbjct: 22  NAKLDTDLLIAHSLGIKRLDIYLDLERPLTDAQLDDLRPLVKRRASREPLQYILGSVEFA 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L        PRPETE LV+      L +  +R    ILDLGTGTGA+ LAL K    
Sbjct: 82  GLELKTDVRALIPRPETEELVE-----LLVQRLQRAPTCILDLGTGTGALALALAKRYSD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VD+S +AL +A  NA     S+R   L+  WF  +     FD+IVSNPPY+    
Sbjct: 137 AAVTAVDLSAEALTLAAENAEALDFSDRVRLLEGSWFVPLPESERFDLIVSNPPYLTEEE 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +     EV  ++P  +L  G+DGL   RTI       LN+ GL +VE G +Q  +++++ 
Sbjct: 197 MTTAEPEVVGYEPHSALVSGVDGLDDLRTIFAEAKERLNEGGLFAVETGISQHDELLKMA 256

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
           +        + +D  G  R + 
Sbjct: 257 KQGGFEHAESVEDLSGRSRFVF 278


>gi|315613126|ref|ZP_07888036.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           ATCC 49296]
 gi|315314688|gb|EFU62730.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           ATCC 49296]
          Length = 278

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      +   +  F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTKEEENFVEEIYQQLAAHKPAQYIVGHADFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +       + +++LD+GTG+GA+ L L K  P +     DIS  AL+
Sbjct: 93  PETEELVELILAEN-----PEENLKVLDIGTGSGAIALGLAKNRPDWSVTAADISKDALQ 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        +   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKYLPEKRIRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|306825266|ref|ZP_07458608.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432702|gb|EFM35676.1| protein-(glutamine-N5) methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 278

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 78/247 (31%), Positives = 119/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + ++ F+     +   H+    I+G  DF+ ++L +      PR
Sbjct: 33  KLSFTDFVFALQQEVTEEEKQFVEEIFQQLAVHKPAQYIIGHVDFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L  +       + ++ILD+GTG+GA+ L L K  P +     DIS  ALE
Sbjct: 93  PETEELVELILTEN-----PEENLKILDIGTGSGAIALGLAKNRPDWSVTAADISQAALE 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENARNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLTDGGKIYLEIGYKQGQSVPALFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|221201721|ref|ZP_03574759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2M]
 gi|221207204|ref|ZP_03580214.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2]
 gi|221172792|gb|EEE05229.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2]
 gi|221178537|gb|EEE10946.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD2M]
          Length = 280

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRSDRPLDAEAVERYRALEARRAAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  + 
Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFDAVESLADLAAIERTT 274


>gi|218235275|ref|YP_002370105.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus B4264]
 gi|218163232|gb|ACK63224.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus B4264]
          Length = 283

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAV--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV ++ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKKLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|319939133|ref|ZP_08013497.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV]
 gi|319812183|gb|EFW08449.1| protoporphyrinogen oxidase [Streptococcus anginosus 1_2_62CV]
          Length = 276

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS  Q ++   +   +     L     + L H     I+G  +F+     +      PR
Sbjct: 33  NLSFTQFVLKMQAEATEDDIELLKKIQSQLLVHRPAQYIIGNAEFHGHSFKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L+ +     +   +++LD+GTG+GA+ L+L  E   ++    DIS  AL+
Sbjct: 93  PETEELVNLILSEN-----QNSSLKVLDIGTGSGAIALSLAAERANWQVTASDISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA    +    D +QSD F ++ G +D+IVSNPPYI     + +GL V   +P ++
Sbjct: 148 LAQENAEA--IDVAIDFVQSDCFQAITGKYDIIVSNPPYISETDREEVGLNVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG + YR IA+   +HL + G   +EIGY Q   V +IFES      +   +D  
Sbjct: 206 LFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKKIFESAFPKMRIRILQDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GKDRMVV 272


>gi|85713813|ref|ZP_01044803.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
 gi|85699717|gb|EAQ37584.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
          Length = 298

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 104/263 (39%), Positives = 142/263 (53%), Gaps = 1/263 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++      V GL    ++      LD+     L     R L  E + RILG ++F+ 
Sbjct: 29  AALEARMLTGAVLGLDLTGLVAQGLRQLDEDDAARLDAFARRRLAGEPLARILGTKEFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LSSDT  PR +TE +V++AL         +  +RI DLGTG+GA+ LALL E P  
Sbjct: 89  LPLKLSSDTLVPRADTETVVETALDILRAEGRMQAALRIADLGTGSGAILLALLTELPAA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG D+S  AL+ AK+NA   G++ R   L SD+ + + G FD+IVSNPPYI S  +  
Sbjct: 149 TGVGTDLSAAALDTAKTNAQDVGLATRAQFLVSDYGNGLSGPFDLIVSNPPYIRSADIAT 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DP ++LDGG DGL  YR IA      L   GL  +EIG  Q   V R+  + 
Sbjct: 209 LAPEVRDHDPPLALDGGRDGLDAYRRIAPQALSLLADGGLLVLEIGQGQDSAVSRLMAAA 268

Query: 243 KLFLV-NAFKDYGGNDRVLLFCR 264
            L ++ +A  D  G  R ++  R
Sbjct: 269 GLTVMGSARTDLAGIGRAVVARR 291


>gi|110597726|ref|ZP_01386010.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM
           13031]
 gi|110340633|gb|EAT59113.1| modification methylase, HemK family [Chlorobium ferrooxidans DSM
           13031]
          Length = 297

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +    +   L  V G S  ++ +     +   +         + L+   +  ILG + FY
Sbjct: 27  EPRLSAELLLGSVIGKSRLELYLQYSRPVYQDELDRFRALCRQRLEGRPVQYILGEQCFY 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
            +  ++      PRPETELLV+ AL               ILD+GTG+G + + + K  P
Sbjct: 87  GLEYSVDERVLIPRPETELLVEQALESLGYSSRGGPGEANILDIGTGSGCIAVTMAKLCP 146

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPY 174
                 VD S  AL +A+ NA  +GV  R   + +D            G F +I+SNPPY
Sbjct: 147 ALTATAVDCSLDALAVARRNAGRHGVESRISFVTADMLDDHFSEKISTGPFTLILSNPPY 206

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I     D L  EVRD++P+++L    +G   YR++A   ++ L   G    E+  +  V 
Sbjct: 207 IPEGEWDSLQKEVRDYEPKLALTT-PNGFECYRSVAGQAAKLLTAGGKLFFELHADGAVL 265

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           V  I +S     +   KDY G DRV+
Sbjct: 266 VSEIMKSHGFSALTVTKDYSGLDRVI 291


>gi|114319434|ref|YP_741117.1| HemK family modification methylase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225828|gb|ABI55627.1| [protein release factor]-glutamine N5-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 295

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 84/249 (33%), Positives = 126/249 (50%), Gaps = 6/249 (2%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G      +  P+              + R L  E +  + G R F+++ L ++++T  PR
Sbjct: 50  GRDRAFFLAHPEHRPPASSLARFRQLLARRLAGEPVAHLTGRRGFWSLELKVTAETLIPR 109

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETELLV++ALA    R++    +R+ DLGTGTGA+ LAL  E P ++   V+ S  AL 
Sbjct: 110 PETELLVEAALA----RVDGDRQLRVADLGTGTGAIALALADECPAWRVTAVEASAGALV 165

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ NA   G+++R   +   WF  + G  FD++VSNPPY+     +    +VR F+PR 
Sbjct: 166 VARENARRLGLADRVQVVAGSWFGPLAGERFDLVVSNPPYVGVHEPELYEGDVR-FEPRS 224

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HL   G   VE G+ Q   V R+F       V   +D  
Sbjct: 225 ALAAGRDGLGDLRRIVGEAPGHLVAGGWLMVEHGFQQGEAVRRLFLEAGFGGVETLRDLA 284

Query: 255 GNDRVLLFC 263
           G++RV +  
Sbjct: 285 GHERVTVGR 293


>gi|299531472|ref|ZP_07044878.1| modification methylase, HemK family protein [Comamonas testosteroni
           S44]
 gi|298720435|gb|EFI61386.1| modification methylase, HemK family protein [Comamonas testosteroni
           S44]
          Length = 285

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 115/267 (43%), Gaps = 14/267 (5%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L  +          +I      L   Q+        +  +   +  + G ++
Sbjct: 24  ARVDAQMLLLHLMQQPAHARAWLITHDGDGLSAEQQARWAQLCAQRQQGAPVAYLTGSKE 83

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + S   +PRP+TE LVD AL      + +    R++DLGTG+GA+ LAL  + 
Sbjct: 84  FYGLDLAVDSRVLDPRPDTETLVDWALEL----LPEGAAHRVVDLGTGSGAIALALQSQR 139

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
           P  + + VD S  AL +A SNA    +  +F      W   ++G    D+IVSNPPYI +
Sbjct: 140 PSARVIAVDASADALAVASSNAARLQLPVQFA--HGSWLQPLDGQEPVDLIVSNPPYIRA 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                        +P  +L  G DGL   R+I D     L   G    E G++Q  DV +
Sbjct: 198 DDPHL---AALTHEPLSALASGADGLEDIRSIIDQAPARLKDGGWLLFEHGWDQAEDVAQ 254

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + ++     V    D  G  R    CR
Sbjct: 255 LMQAAGFEQVQHRHDLAGIARCTGGCR 281


>gi|289765719|ref|ZP_06525097.1| methyltransferase [Fusobacterium sp. D11]
 gi|289717274|gb|EFD81286.1| methyltransferase [Fusobacterium sp. D11]
          Length = 370

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 8/267 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRD 59
           +  L D+      V  ++ + +       +    +  +    ++R+ K + +  ILG  +
Sbjct: 89  LSPLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWE 148

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY +   ++     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E 
Sbjct: 149 FYGLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANEL 204

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
                 G+DI+ KA+++A  N + N + E  + ++S+ F  ++    +D+IVSNPPYI  
Sbjct: 205 KSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISK 263

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +
Sbjct: 264 EEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTK 323

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I ++    +++  KDYGGNDRV++  +
Sbjct: 324 ILQNNNFDILSVIKDYGGNDRVVIAKK 350



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 17/45 (37%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  +   + + ++
Sbjct: 9  PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 53


>gi|256027763|ref|ZP_05441597.1| methyltransferase [Fusobacterium sp. D11]
          Length = 383

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 139/267 (52%), Gaps = 8/267 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRD 59
           +  L D+      V  ++ + +       +    +  +    ++R+ K + +  ILG  +
Sbjct: 102 LSPLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWE 161

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY +   ++     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E 
Sbjct: 162 FYGLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANEL 217

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
                 G+DI+ KA+++A  N + N + E  + ++S+ F  ++    +D+IVSNPPYI  
Sbjct: 218 KSSSITGIDINEKAIKLANENKILNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISK 276

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              + L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +
Sbjct: 277 EEYETLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTK 336

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I ++    +++  KDYGGNDRV++  +
Sbjct: 337 ILQNNNFDILSVIKDYGGNDRVVIAKK 363



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 17/45 (37%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  +   + + ++
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66


>gi|15900892|ref|NP_345496.1| HemK protein [Streptococcus pneumoniae TIGR4]
 gi|111658250|ref|ZP_01408942.1| hypothetical protein SpneT_02000564 [Streptococcus pneumoniae
           TIGR4]
 gi|14972494|gb|AAK75136.1| HemK protein [Streptococcus pneumoniae TIGR4]
          Length = 279

 Score =  266 bits (680), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  LA +         + +LD+GTG+GA+ LAL K  P +     DIS  AL
Sbjct: 93  RPETEELVELILAEN-----PVKNLMVLDIGTGSGAIALALAKNRPDWSVTAADISQDAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DVASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|229153492|ref|ZP_04281670.1| Protein hemK [Bacillus cereus m1550]
 gi|228630096|gb|EEK86747.1| Protein hemK [Bacillus cereus m1550]
          Length = 283

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|83953607|ref|ZP_00962328.1| modification methylase, HemK family protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841552|gb|EAP80721.1| modification methylase, HemK family protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 280

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     +           I        +  ++G R FY
Sbjct: 24  DPARDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSHLVGQRAFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S D  +PRPETE L++ AL+            R+LDLGTG+G + + LL E   
Sbjct: 84  GRDFKVSRDVLDPRPETESLIELALS--------EPFERVLDLGTGSGCILVTLLAEQQD 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GVG+D+S  A   A +NAV +GV  R +  QSDWFS+ EG FD+IVSNPPY+    + 
Sbjct: 136 ARGVGLDLSEAACLQASANAVLHGVQARAEITQSDWFSAAEGRFDLIVSNPPYLAQSEMA 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  E+R  +P ++L  G DGLS YR IA     +L   G    EIG+ Q  DV  IFE+
Sbjct: 196 DVSPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLAPTGRVLAEIGWQQGADVKAIFEA 255

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    D GG DRVL
Sbjct: 256 AGWGRVRILPDLGGRDRVL 274


>gi|262282282|ref|ZP_06060050.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
 gi|262261573|gb|EEY80271.1| protoporphyrinogen oxidase [Streptococcus sp. 2_1_36FAA]
          Length = 276

 Score =  265 bits (679), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +   +R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNQLSFTDFVLKLRAEVSQEEREELKVIKKQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         V +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLNLKVDERVLIPRPETEELVELILSEN-----PESSVSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A+ NA + G+S     +QSD   +++G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSEDALSLARENARSCGLS--LTFVQSDCLDAIQGNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG   YR I +    +L + G   +EIGY Q   VV + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYEVYRKITEQAGDYLTEKGKIYLEIGYKQGDGVVDLL 249

Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KQFFPQKRIRVLKDQFGKDRMV 271


>gi|161526058|ref|YP_001581070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans ATCC 17616]
 gi|189349227|ref|YP_001944855.1| HemK protein [Burkholderia multivorans ATCC 17616]
 gi|160343487|gb|ABX16573.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans ATCC 17616]
 gi|189333249|dbj|BAG42319.1| HemK protein [Burkholderia multivorans ATCC 17616]
          Length = 280

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRALEARRAAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  + 
Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFDAVESLADLAAIERTT 274


>gi|92116090|ref|YP_575819.1| HemK family modification methylase [Nitrobacter hamburgensis X14]
 gi|91798984|gb|ABE61359.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 317

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 103/263 (39%), Positives = 136/263 (51%), Gaps = 1/263 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+         L    +I      L       L     R L  E + RILG +DF+ 
Sbjct: 52  PALDARMLTGAALHLDLTGLIAQGPRQLTADDAACLDAFARRRLAGEPVARILGTKDFWG 111

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS+DT  PRP+TE +V++AL         R  +RI DLGTG+GA+ LALL E P  
Sbjct: 112 LPLKLSADTLVPRPDTETVVEAALEILRAEGRTRTPLRIADLGTGSGAILLALLSELPDA 171

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG D+S  AL+ AK+NA   G++ R D   SD+   +   FD+IVSNPPYI S  +  
Sbjct: 172 TGVGTDLSAAALDTAKANAQRLGLAPRADFTVSDYAGGLSDPFDLIVSNPPYIRSADIAS 231

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DP ++LDGG DGL  YR IA   +  L   GL  +E+G  Q  DVVR+  + 
Sbjct: 232 LAPEVRDHDPHLALDGGSDGLEAYRRIAPQAAGLLAPGGLLVLEVGQGQDGDVVRLVAAA 291

Query: 243 KLFLVN-AFKDYGGNDRVLLFCR 264
            L +   A  D  G  R +   +
Sbjct: 292 GLTVAGPARADLAGIGRAVAARK 314


>gi|322391879|ref|ZP_08065344.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris
           ATCC 700780]
 gi|321145359|gb|EFX40755.1| protein-(glutamine-N5) methyltransferase [Streptococcus peroris
           ATCC 700780]
          Length = 276

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 11/260 (4%)

Query: 6   DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ S   + R+   LS    I      +   ++ F+ +   + + H     I+G  +FY 
Sbjct: 20  EAESLSFVYRILKNLSFTDFIFAIQQEITPEEKEFVESIYKQLVAHVPAQYIIGHAEFYG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETE LV+  L  +         + +LD+GTG+GA+ LAL K  P +
Sbjct: 80  MELKVDERVLIPRPETEELVELILTEN-----PNPNLSVLDIGTGSGAIALALAKNRPDW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS  AL +A  NA    +  +    +SD F  +   +D+IVSNPPYI       
Sbjct: 135 CVTASDISPDALNLASENAKLQDL--KISFKKSDCFEEITENYDIIVSNPPYISRADESE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +GL V   +P ++L    DGL+ YR IA     HL + G   +EIGY Q   V  +F   
Sbjct: 193 VGLNVLHSEPHLALFAEEDGLAIYRKIAQEAKHHLREGGEIYLEIGYKQGHSVPALFRKY 252

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 LPEKRVRTLKDQFGQDRMVV 272


>gi|307706537|ref|ZP_07643344.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus mitis SK321]
 gi|307617992|gb|EFN97152.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus mitis SK321]
          Length = 278

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      ++  ++ F+     +   H+    I+G  DFY ++LT+      PR
Sbjct: 33  NLSFTDFVFALQQEVNKEEKQFVKGIFQQLAAHKPAQYIIGQTDFYGMQLTVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV   LA +         + +LD+GTG+GA+ LAL K  P +     DIS  AL+
Sbjct: 93  PETEELVGLILAEN-----PETNLSVLDIGTGSGAIALALAKNRPDWSVTAADISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LANENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|21230309|ref|NP_636226.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769697|ref|YP_244459.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111859|gb|AAM40150.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575029|gb|AAY50439.1| protoporphyrinogen oxidase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 283

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +       +   Q       + R  + E +  + G R F+ 
Sbjct: 22  ARSDAEPLLLHALGRDRAWLFAHGRDPVPAEQAQRFGALVERRHQGEPVAYLTGSRGFWT 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+ T  PR +TE LV+ AL     R+E    VR++DLGTG+GA+ LA+  E P  
Sbjct: 82  LDLAVSTATLIPRADTETLVELALE----RLELTAGVRVVDLGTGSGAIALAIASERPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +  D S  AL IA+ NA  +G+    +     W   + G  FD+I SNPPYI +    
Sbjct: 138 QLIATDASADALAIARHNAHAHGL-HNVECRLGHWLQPLAGERFDLIASNPPYIAAADPH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +
Sbjct: 197 LQQGDLR-YEPASALASGSDGLDDIRLIVADTPAHLLAGGWLLLEHGWDQGEAVAALLIA 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V   +D    DRV L  
Sbjct: 256 RGFAAVATHQDLEQRDRVTLGQ 277


>gi|193077722|gb|ABO12580.2| methyl transferase [Acinetobacter baumannii ATCC 17978]
          Length = 273

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 121/255 (47%), Gaps = 10/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+L+++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGTGAIALALASERPNWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L++AK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLF 262
              +DYG NDRV L 
Sbjct: 254 KTIQDYGQNDRVTLA 268


>gi|187925495|ref|YP_001897137.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phytofirmans PsJN]
 gi|187716689|gb|ACD17913.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phytofirmans PsJN]
          Length = 286

 Score =  265 bits (679), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   D  LD +          R +  E + +++G R+F+ + 
Sbjct: 24  LEARILLTHVLGWRPTQLITRSDEALDGKLVERYQTLEARRVAGEPVAQLVGAREFFGLD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLVD+AL      +E     R+LDLGTGTGA+ +A+    P  + 
Sbjct: 84  FEVTPHVLIPRPETELLVDTAL----SALENLVRPRVLDLGTGTGAIAVAIASMRPDARV 139

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S +AL +A  NA     ++R        QSDW+ S++    FDVIVSNPPYI S 
Sbjct: 140 WALDRSAEALAVATRNAARLLDAQRPGGAVVLTQSDWYDSLDAALRFDVIVSNPPYIASG 199

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+PR +L    DGLS  R I  G    L  DG+  +E GY+Q   V  +
Sbjct: 200 DPHLYEGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAADGVLWIEHGYDQAEAVRAL 258

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             ++    V + +D  G +R+
Sbjct: 259 LTAQGFAQVRSERDLAGIERI 279


>gi|254465042|ref|ZP_05078453.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium Y4I]
 gi|206685950|gb|EDZ46432.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium Y4I]
          Length = 283

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/259 (37%), Positives = 130/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G R+FY
Sbjct: 23  DPARDARVLLAHAARIEASRVTLIAPEELAPEVAERYEQLIALRAVRVPVSHLIGEREFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE+L+++ALA            R+LDLG G+G + + LL E   
Sbjct: 83  GRRFKVSRDVLDPRPETEILIEAALA--------EPYSRVLDLGVGSGCILVTLLAERQE 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVDIS  A   A +NAV + V  R D  QSDWF  VEG FD+IVSNPPYI    ++
Sbjct: 135 ATGLGVDISEAACLQASANAVLHRVQARADIRQSDWFEGVEGQFDLIVSNPPYIALDEME 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P I+L  G DGL  YR IA  V+ HL   G   +EIG +Q   V  + E 
Sbjct: 195 GLSAEVRGHEPGIALTDGGDGLGAYRRIAAQVTGHLAPGGRVLLEIGPSQGRAVSALLEE 254

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  +   +D  G DRV+
Sbjct: 255 AGLSGIAVLQDLDGRDRVV 273


>gi|260554586|ref|ZP_05826807.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Acinetobacter baumannii ATCC 19606]
 gi|260411128|gb|EEX04425.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Acinetobacter baumannii ATCC 19606]
          Length = 273

 Score =  265 bits (678), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 122/255 (47%), Gaps = 10/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L++AK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  +F +     +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAAHGFSEI 253

Query: 248 NAFKDYGGNDRVLLF 262
              +DYG NDRV L 
Sbjct: 254 KTIQDYGQNDRVTLA 268


>gi|325267515|ref|ZP_08134168.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394]
 gi|324981040|gb|EGC16699.1| protein methyltransferase HemK [Kingella denitrificans ATCC 33394]
          Length = 311

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  +TGLS  Q+I     +L   Q         R  + E +  +LG R+FY 
Sbjct: 56  PRLETRLLLQHITGLSHSQLITRDGDLLPPEQEAQWRQLCRRREQGEPVAYLLGSREFYG 115

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRPETE L+++AL              + D+GTG+G + ++   E P  
Sbjct: 116 RTFAVNRHVLIPRPETEHLLEAALCRL------PAGGALWDMGTGSGIIAVSAKLERPDA 169

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVI 179
                DIS  AL +A+ NA T   +  F   Q  WF + +     +DVIVSNPPYI +  
Sbjct: 170 DVFASDISADALAVAQYNAQTLKAACTFA--QGSWFEAQKQPARQWDVIVSNPPYIRADD 227

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P  +L    DGL H R I     +HL   G   +E GY+Q  D+ R+F
Sbjct: 228 PHLAQGDLR-FEPEGALTDFADGLQHIRHIVAQAPQHLKTGGYLLLEHGYDQAADIRRLF 286

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                       D  G DRV L  
Sbjct: 287 AQHGYRHCETLLDLAGLDRVTLAQ 310


>gi|83942387|ref|ZP_00954848.1| modification methylase, HemK family protein [Sulfitobacter sp.
           EE-36]
 gi|83846480|gb|EAP84356.1| modification methylase, HemK family protein [Sulfitobacter sp.
           EE-36]
          Length = 280

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     +           I        +  ++G R FY
Sbjct: 24  DPARDARILLAHAASVDAARVTLIAPEEIAPDIAERYEKLIALRAVRVPVSHLVGQRAFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S D  +PRPETE L++ AL+            R+LDLGTG+G + + LL E   
Sbjct: 84  GRDFKVSRDVLDPRPETESLIELALSERFE--------RVLDLGTGSGCILVTLLAEQQD 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GVG+D+S  A   A +NAV +GV  R +  QSDWFS+ EG FD+IVSNPPY+    + 
Sbjct: 136 ARGVGLDLSEAACLQASANAVLHGVQARAEIKQSDWFSAAEGRFDLIVSNPPYLAQSEMA 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  E+R  +P ++L  G DGLS YR IA     +L   G    EIG+ Q  DV  IFE+
Sbjct: 196 DVSPELRLHEPEMALTDGQDGLSVYRIIAAQAQGYLTPTGRVLAEIGWQQGADVKAIFEA 255

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    D GG DRVL
Sbjct: 256 AGWGRVRILPDLGGRDRVL 274


>gi|317153067|ref|YP_004121115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943318|gb|ADU62369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 284

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 14/265 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V GL+   + ++ D  L   +   + +   R    E +  +LG R+FY +  +
Sbjct: 26  AQVLVAEVLGLTRLGLSLERDRALTPEETDRIRSLAARRASGEPLAYLLGRREFYGLDFS 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE ++++ L            VR  DLGTG+G + + L    P   G+ 
Sbjct: 86  VTPDVLIPRPETEHVIEAVLN----AFSPDTPVRFADLGTGSGILAVTLAHCFPHATGLA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           VD+S  AL +A+ NA  +GV +R   +Q D+   +  +G FD+IVSNPPY+     +   
Sbjct: 142 VDLSGPALAVARRNARAHGVHDRIAFVQGDFTGPILGKGRFDLIVSNPPYVTDEEFERAS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-----VRIF 239
            EV  F+PR +L  G DGL H R +       L   GL  +EIG  Q   V      +  
Sbjct: 202 REVTGFEPRTALVSGPDGLDHIRAMLPRALEALRPGGLLLMEIGCGQVEGVNIITSNQCL 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ESR    V   KD  G+DRV+   R
Sbjct: 262 ESR---DVGVIKDLAGHDRVVSMRR 283


>gi|241664383|ref|YP_002982743.1| modification methylase, HemK family [Ralstonia pickettii 12D]
 gi|240866410|gb|ACS64071.1| modification methylase, HemK family [Ralstonia pickettii 12D]
          Length = 300

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+ 
Sbjct: 28  PALEARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TE+LV+ AL     R+E+RD   +LD+GTG+G + +++       
Sbjct: 88  RTFKVTPAVLIPRPDTEVLVEQALD----RLEERDAPAVLDMGTGSGIIAISIALARRDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +        DW+ ++ G      FD+I SNPPYI +
Sbjct: 144 RVWATDASADALAVAIDNAKALGAT-NVQAALGDWYGALAGTDAPPAFDLIASNPPYIAA 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H R+I  G    L   G   VE GY+Q   V  
Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +        V   +D  G+DR 
Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283


>gi|254510882|ref|ZP_05122949.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium KLH11]
 gi|221534593|gb|EEE37581.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium KLH11]
          Length = 285

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  +LG R+FY
Sbjct: 25  DPARDARVLLAHAARIEASRVTLIAPEELPVDIAERYDQLISLRAIRVPVSHLLGEREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++AL+             +LDLG G+G + + LL E   
Sbjct: 85  GRRFKVSRDVLDPRPETEALIEAALS--------EPFDHVLDLGVGSGCILITLLAERAS 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  A   A +NAV + V  R +  QSDWF ++EG FD+IVSNPPYI +  + 
Sbjct: 137 AAGVGVDLSESACLQASANAVQHQVQGRVEIRQSDWFENIEGQFDLIVSNPPYISADEMQ 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+ +PRI+L    DGL  YR IA      L   G   VEIG  Q   V  +F++
Sbjct: 197 ELSPEVREHEPRIALTDEGDGLDAYRRIAAAAPDFLTPGGRILVEIGPTQGAYVSALFDA 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L       D  G DRV+
Sbjct: 257 AGLTGTQVIPDLDGRDRVV 275


>gi|311279354|ref|YP_003941585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterobacter cloacae SCF1]
 gi|308748549|gb|ADO48301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterobacter cloacae SCF1]
          Length = 278

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG S   ++   ++ L   Q   L   + R  + E +  ++G R+F++
Sbjct: 20  PRRDAEILLGHVTGKSRTFILAFDETPLSAEQLDALAGLLARRARGEPVAHLVGMREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----GDAPGRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+   A+ +A+ N    GV      LQS WFS+++G  FD+IVSNPPYI+     
Sbjct: 135 QLTAVDVVADAVALARRNVAHLGV-NNVQVLQSSWFSALDGQRFDMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L     GL+    I      +L+  G   +E G+ Q   V  +F  
Sbjct: 194 LAQGDVR-FEPKTALVAADAGLADLAHIIAQGRCYLSAGGWMLLEHGWQQGAAVRALFAD 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +DYGGN+R+ L  
Sbjct: 253 AGYREVETCRDYGGNERLTLGR 274


>gi|83592090|ref|YP_425842.1| modification methylase HemK [Rhodospirillum rubrum ATCC 11170]
 gi|83575004|gb|ABC21555.1| Modification methylase HemK [Rhodospirillum rubrum ATCC 11170]
          Length = 325

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 105/262 (40%), Positives = 137/262 (52%), Gaps = 5/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+      V GLS   V++  D V+   +   L   I R    E + RILG R F+ 
Sbjct: 44  PRRDARLLAGHVLGLSPGAVLLADDRVVTPEEAQALEAVIARRETREPVSRILGHRGFWR 103

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L L +DT +PRP+TE LV++ LA       +    RILDLGTG+G + LALL + P  
Sbjct: 104 FDLALGADTLDPRPDTETLVEAGLAVL-----EGCGGRILDLGTGSGCILLALLADRPGA 158

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+DI+  A+ +A  NA   G+  R      DW ++V G FD+IVSNPPYI S  +  
Sbjct: 159 IGLGIDIAPGAVRVALRNARALGLERRALFAVGDWAAAVAGPFDLIVSNPPYIPSADIAA 218

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  FDP  +LDGG DGL  YR +A  V   L   G+ +VE G  Q  DV  + E  
Sbjct: 219 LEPEVARFDPSRALDGGADGLDPYRILAAQVPALLAPAGVLAVEFGQGQARDVAGLLEVG 278

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L      KD  G +R LL  R
Sbjct: 279 GLCPYEIKKDLSGEERCLLARR 300


>gi|189485188|ref|YP_001956129.1| methylase of polypeptide chain release factors [uncultured Termite
           group 1 bacterium phylotype Rs-D17]
 gi|170287147|dbj|BAG13668.1| methylase of polypeptide chain release factors [uncultured Termite
           group 1 bacterium phylotype Rs-D17]
          Length = 288

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 7/260 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   D    L  V      ++ +     L D Q       I+R  K E +  I+G   F 
Sbjct: 25  EPESDVEVLLSFVLQTKRSKLPLMRSQKLTDIQVLQYERYILRRSKREPVAYIMGLAGFM 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++ +   PRPETE+LV++AL  +    +K +   +LDL TG+G + ++L K   F
Sbjct: 85  DFEFKVNKNVLIPRPETEILVETALKIA----KKENKNSVLDLCTGSGCIAVSLAKLGKF 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              +  D+S  ALEIA+ NA +N V +  + ++S+ FS + G  FD+I+SNPPY+     
Sbjct: 141 KDIMASDVSGSALEIARENARSNNVLD-INFVKSNVFSGISGKNFDIIISNPPYVSHEEY 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  E++ ++P I+L     GL  Y+ IA    R+LN +G   +E+   +  ++ +IF 
Sbjct: 200 DALEPELK-YEPEIALAADDSGLFFYKKIAGKAGRYLNDNGFILIELNAYKAGEIKQIFS 258

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     +   KDY G  R+L
Sbjct: 259 TCSYKNIEIVKDYAGLPRML 278


>gi|83859677|ref|ZP_00953197.1| hemK family protein [Oceanicaulis alexandrii HTCC2633]
 gi|83852036|gb|EAP89890.1| hemK family protein [Oceanicaulis alexandrii HTCC2633]
          Length = 285

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 135/262 (51%), Gaps = 3/262 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L      S  +++ +  S + D +       I R  + E +  ILG + F+
Sbjct: 24  EAADDARRLLLAAFEGSPARLLTEMASEMPDAELERFDALIGRREQREPLSHILGTQPFW 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++ D   PR +TE L+++ALA      ++R  +RILD+ TG+GA+ LALL E P 
Sbjct: 84  TLELKVTRDVLTPRADTETLIEAALA---AYPDRRAPLRILDIATGSGAIILALLSEFPN 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G   DIS  AL +A+ NA   G+++R       W   +EG FD++VSNPPYI + ++D
Sbjct: 141 ATGAATDISEAALAVAQENADLTGLADRVSFQHQSWADGLEGPFDLLVSNPPYIATAVID 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++PR++L+GG  G   Y  +    SR L   GL   EIGY+Q V        
Sbjct: 201 ELEPEVRAYEPRMALEGGRTGFEPYPHLFAEASRLLVPGGLALFEIGYDQGVRAREAASE 260

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                    KD  G+DRV+   
Sbjct: 261 AGAKETRILKDLAGHDRVVSLR 282


>gi|296159489|ref|ZP_06842313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. Ch1-1]
 gi|295890197|gb|EFG69991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. Ch1-1]
          Length = 281

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   D  L             R    E + +++G R+F+ + 
Sbjct: 19  LEARILLTHVLGWRPTQLITRSDEPLQAEVVERYRALEARRAAGEPVAQLVGAREFFGLN 78

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++ALA     +E     R+LDLGTGTGA+ +A+    P  + 
Sbjct: 79  FEVTPHVLIPRPETELLVETALA----ALENLARPRVLDLGTGTGAIAVAIASMRPDAQV 134

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S +AL +A  NA     ++R        QSDW+ S++    F VIVSNPPYI S 
Sbjct: 135 WALDRSAEALAVATRNAARLLDAKRPGGAVVLTQSDWYGSLDAALRFHVIVSNPPYIASG 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+PR +L    DGLS  R I  G    L   G+  +E GY+Q   V  +
Sbjct: 195 DPHLAQGDLR-FEPRGALTDEADGLSAIRAIIAGAPTRLAAGGVVWIEHGYDQAEAVREL 253

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             ++    V + +D  G +R+
Sbjct: 254 LTAQGFMQVRSERDLAGIERI 274


>gi|325981710|ref|YP_004294112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosomonas sp. AL212]
 gi|325531229|gb|ADZ25950.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosomonas sp. AL212]
          Length = 278

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/255 (27%), Positives = 132/255 (51%), Gaps = 7/255 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  ++   ++  PD  L  +Q    ++ + + ++   +  ++G R F+++  
Sbjct: 21  DAILLLRHVLSVNHAFLLTHPDQALPGQQFEKFSSLVQQRIEGLPVAYLIGKRAFFDLTF 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV+ AL      I  +   ++LDLGTG+GA+ +++ K  P  + +
Sbjct: 81  KVTEAVLIPRPETELLVEWALEL----IPSQKFCKVLDLGTGSGAIGISIAKHRPQSQVI 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            VD+S  A+++ +SN     V+   + ++ +WF  + G  FD+IVSNPPY+         
Sbjct: 137 AVDLSPAAIDVCQSNVEILEVA-NLNVIRGNWFDELSGEKFDLIVSNPPYVAEDDPHLQQ 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P ++L  G  G++    I +    +L K+G   +E GYNQ     ++  ++  
Sbjct: 196 GDLR-FEPEMALSAGEHGMACITHIINAAPGYLGKEGWLLLEHGYNQAEACRQLLRNKDF 254

Query: 245 FLVNAFKDYGGNDRV 259
             + ++ D  G  RV
Sbjct: 255 SNICSYPDLAGIMRV 269


>gi|315222985|ref|ZP_07864864.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus
           F0211]
 gi|315187935|gb|EFU21671.1| protein-(glutamine-N5) methyltransferase [Streptococcus anginosus
           F0211]
          Length = 276

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS  Q ++   +         L     + L H     I+G  +F+     +      PR
Sbjct: 33  NLSFTQFVLKMQAEATADDIELLKKIQSQLLVHRPAQYIIGNAEFHGHSFKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L+ +         +++LD+GTG+GA+ L+L  E   ++    DIS  AL+
Sbjct: 93  PETEELVNLILSEN-----PNTNIKVLDIGTGSGAIALSLATERSNWQVTASDISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA    +    D +QSD F ++ G +D+IVSNPPYI     + +GL V   +P ++
Sbjct: 148 LAQENAEA--IDVAIDFVQSDCFQAITGKYDIIVSNPPYISETDREEVGLNVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG + YR IA+   +HL + G   +EIGY Q   V  +F+S      +   +D  
Sbjct: 206 LFAEEDGYAVYRKIAENAQKHLTEKGKIYLEIGYKQGEHVKELFQSAFPKMRIRVLQDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GKDRMVV 272


>gi|40062726|gb|AAR37631.1| modification methylase, HemK family [uncultured marine bacterium
           438]
          Length = 280

 Score =  265 bits (678), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 144/263 (54%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               DS   L          VI++P  VL+  Q     + I R  K E I  ++  ++F+
Sbjct: 21  NPQLDSEILLSNSIKRDKKHVILNPKEVLNSEQLGKFKSLIERRKKGEPIAYLINKKEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D   PRP++EL+++  L        K D ++ILD+GTG+G + L++LKE   
Sbjct: 81  KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDQLQILDIGTGSGCILLSILKERSN 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           F G G+DIS K+++++K NA    ++ R     S   +   G +D+IVSNPPYIE + + 
Sbjct: 137 FYGTGIDISKKSIDVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIIVSNPPYIEQLCLK 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V +F+P+++L GG DG S  R + +  S  + K+G   +EIG+NQK  V++I + 
Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKTSNLIKKNGKFILEIGFNQKNKVIKILKE 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              ++  A KDYG NDR ++  +
Sbjct: 257 EGFYVNKAIKDYGNNDRCIISTK 279


>gi|315924272|ref|ZP_07920496.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622433|gb|EFV02390.1| protein-(glutamine-N5) methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 283

 Score =  265 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 131/262 (50%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q+  ++   L  +        ++ P+  L   Q     NAI R   HE    I G R+F 
Sbjct: 27  QSRFEAEVLLAAMMHQERLYFLMHPEIPLSSEQIRAFANAIKRRSAHEPSAMITGHREFM 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +++    PRP+TE +V++ALA+    I KR    +LDL  G+GA+ +AL    P 
Sbjct: 87  GLDFDVNAHVLIPRPDTENIVETALAW----ISKRSRPEVLDLCCGSGAIGIALKNCCPN 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +    DIS +AL IAKSNA  + +  +   +  D F  +     FD+IV+NPPYI +  
Sbjct: 143 IQLWLSDISKEALAIAKSNAQKHHIEAQ--LILGDLFEGLLPGQRFDMIVTNPPYIPTDE 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  ++++++PR++LDGG DG   Y+ +   V  HL + G   +E G+NQ   ++ + 
Sbjct: 201 IADLSPDIKNYEPRVALDGGEDGYDFYKRLFASVHDHLKEQGYLVLECGWNQADTLIDM- 259

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            +     +    D  G  R L+
Sbjct: 260 -AHSFSHIERIYDLAGFARGLV 280


>gi|75762681|ref|ZP_00742520.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228903803|ref|ZP_04067919.1| Protein hemK [Bacillus thuringiensis IBL 4222]
 gi|228942475|ref|ZP_04105012.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228975407|ref|ZP_04135963.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228982044|ref|ZP_04142337.1| Protein hemK [Bacillus thuringiensis Bt407]
 gi|74489827|gb|EAO53204.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228777708|gb|EEM25982.1| Protein hemK [Bacillus thuringiensis Bt407]
 gi|228784389|gb|EEM32412.1| Protein hemK [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228817217|gb|EEM63305.1| Protein hemK [Bacillus thuringiensis serovar berliner ATCC 10792]
 gi|228855830|gb|EEN00374.1| Protein hemK [Bacillus thuringiensis IBL 4222]
 gi|326943126|gb|AEA19022.1| modification methylase, HemK family [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 283

 Score =  265 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S  +      DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFDKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|22537234|ref|NP_688085.1| HemK family modification methylase [Streptococcus agalactiae
           2603V/R]
 gi|25011159|ref|NP_735554.1| modification methylase, HemK family [Streptococcus agalactiae
           NEM316]
 gi|76798428|ref|ZP_00780668.1| HemK protein [Streptococcus agalactiae 18RS21]
 gi|77410474|ref|ZP_00786835.1| modification methylase, HemK family [Streptococcus agalactiae
           CJB111]
 gi|77413281|ref|ZP_00789477.1| modification methylase, HemK family [Streptococcus agalactiae 515]
 gi|22534101|gb|AAM99957.1|AE014241_8 modification methylase, HemK family [Streptococcus agalactiae
           2603V/R]
 gi|23095558|emb|CAD46767.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76586223|gb|EAO62741.1| HemK protein [Streptococcus agalactiae 18RS21]
 gi|77160668|gb|EAO71783.1| modification methylase, HemK family [Streptococcus agalactiae 515]
 gi|77163422|gb|EAO74372.1| modification methylase, HemK family [Streptococcus agalactiae
           CJB111]
 gi|319745080|gb|EFV97406.1| protein-(glutamine-N5) methyltransferase [Streptococcus agalactiae
           ATCC 13813]
          Length = 276

 Score =  265 bits (677), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +   
Sbjct: 28  LKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LVD  L+ +     K +   +LD+GTG+GA+ ++L KE P +  +  DIS
Sbjct: 88  VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL++AK NA  N        ++SD FS++ G FD+IVSNPPYI     D +G  V   
Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISGKFDIIVSNPPYISYNDKDEVGKNVLAS 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249
           +P  +L    +GL+ YR I +    +L   G    EIGY Q  D+  + +          
Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260

Query: 250 FKDYGGNDRVLLF 262
            KD  G DR+++ 
Sbjct: 261 LKDIFGKDRMVVL 273


>gi|260549388|ref|ZP_05823607.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|260407497|gb|EEX00971.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
          Length = 271

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 119/256 (46%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP     +   I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLP-----NKANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L IAK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLNIAKENAQTHGLYH-VKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G   +E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHQGLADIEIIIAQGKNWLKPQGWIVLEHGYDQGQAVRGIFTEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
              +DYG NDRV L  
Sbjct: 254 KTIQDYGQNDRVTLAR 269


>gi|91201017|emb|CAJ74074.1| similar to protein methyltransferase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 323

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 118/268 (44%), Gaps = 7/268 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +      Q    PD  +          A+ R  K   +  I    +F +
Sbjct: 48  PRLDAEVILSHLLNCDRIQFHTHPDKPVQRIIASRYKKAVQRRAKRVPLQYITNHAEFMS 107

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLV++ +  +   I + ++V I+D+G G+G + ++L K     
Sbjct: 108 SDFYVDERVLIPRPETELLVEAVIKKAKSFIHENEIV-IIDIGVGSGNIAISLAKNISTA 166

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177
             + +DIS +AL++AK N   + + E+   L  + +  +     +     IVSNPPYI S
Sbjct: 167 GIMAIDISPEALDVAKMNTQKHHLQEKITFLCGNVYEPLQSCSIKTKAHFIVSNPPYIAS 226

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EVRD++P  +L  G  GL  +  I    +  L   G   +E+   Q   V++
Sbjct: 227 TELSELQQEVRDYEPYTALISGNSGLEMFERILAEANSWLRPAGFLLLEVAEKQARQVIK 286

Query: 238 IFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           + ++      +   KDY    R+++  R
Sbjct: 287 MIKNTNIFTSIQRIKDYQNISRIIIAQR 314


>gi|30023359|ref|NP_834990.1| modification methylase, HemK family [Bacillus cereus ATCC 14579]
 gi|228961592|ref|ZP_04123201.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|229112742|ref|ZP_04242275.1| Protein hemK [Bacillus cereus Rock1-15]
 gi|229130578|ref|ZP_04259534.1| Protein hemK [Bacillus cereus BDRD-Cer4]
 gi|229147869|ref|ZP_04276210.1| Protein hemK [Bacillus cereus BDRD-ST24]
 gi|296505753|ref|YP_003667453.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
 gi|29898920|gb|AAP12191.1| Methyltransferase [Bacillus cereus ATCC 14579]
 gi|228635519|gb|EEK92008.1| Protein hemK [Bacillus cereus BDRD-ST24]
 gi|228652917|gb|EEL08799.1| Protein hemK [Bacillus cereus BDRD-Cer4]
 gi|228670723|gb|EEL26034.1| Protein hemK [Bacillus cereus Rock1-15]
 gi|228798074|gb|EEM45078.1| Protein hemK [Bacillus thuringiensis serovar pakistani str. T13001]
 gi|296326805|gb|ADH09733.1| modification methylase, HemK family [Bacillus thuringiensis BMB171]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEIFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|127513839|ref|YP_001095036.1| HemK family modification methylase [Shewanella loihica PV-4]
 gi|126639134|gb|ABO24777.1| modification methylase, HemK family [Shewanella loihica PV-4]
          Length = 280

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +       +   PD  L   Q       + R      I  I+G R+F++
Sbjct: 23  AKLDAEVMLLHIIHKQRSYLYTWPDERLTSEQVTEYKQMVGRRELGTPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAFERSNW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N     +  + + LQSDWF ++    F++IVSNPPYI+     
Sbjct: 138 QITAVDKVLEAVALAKANRDNLKLP-QVEVLQSDWFDAINRYDFNLIVSNPPYIDEEDEH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G  G +    IA+    +L   G   +E G+ Q + V      
Sbjct: 197 LSQGDVR-FEPHSALTAGEHGYADLFYIAEAARDYLAPGGYLLLEHGFGQALTVRDKMIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYEAVATVRDFGSNDRCTLGR 277


>gi|167464537|ref|ZP_02329626.1| modification methylase, HemK family protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322383118|ref|ZP_08056945.1| glutamine methylase of release factor 1-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152780|gb|EFX45406.1| glutamine methylase of release factor 1-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 293

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 5/259 (1%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  + G     +++    V            + R    E +  ILG +DFY +   +
Sbjct: 32  ELLLQHLFGWERSTLLLRWGEVFPASYENQWEELVNRKAGGEPVQYILGEQDFYGLPFEV 91

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETELLV+  +        +   + + D+GTG+GA+ + L    P ++    
Sbjct: 92  NKAVLIPRPETELLVERIIYEGKRLFPQGSPL-LGDIGTGSGAIPVTLAHACPEWRVYSS 150

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLG 184
           D+S  ALE+A+ NAV NGV +R   LQ D            D++VSNPPYI +  +  L 
Sbjct: 151 DLSPLALEVARRNAVRNGVGDRVTLLQGDLLLPYVERGLPIDILVSNPPYIPTGDLPALQ 210

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EVR F+P  +L GG DGL  YR + D +     +  L  +E+G  Q  DV  +      
Sbjct: 211 PEVRQFEPHTALFGGPDGLDLYRRMMDQLGSLPKQPALVGLEVGIGQADDVANLLRGAGD 270

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V   KD  G DR ++ 
Sbjct: 271 WSSVEYVKDLAGIDRHVIA 289


>gi|315649891|ref|ZP_07902973.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus vortex V453]
 gi|315274690|gb|EFU38072.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus vortex V453]
          Length = 296

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 131/268 (48%), Gaps = 6/268 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+  R++   L  V GLS     +          R  L  AI R  +      I+G ++F
Sbjct: 31  MEPQRNAQLLLEHVLGLSGSSYYMALPEPFPAECRHALEEAIRRKAEGVPAQYIIGEQEF 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119
           Y     ++     PRPETELLV++ L +      + +  ++ +D+GTG+GA+ + L  ++
Sbjct: 91  YGRPFEVTPAVLIPRPETELLVEAVLKYGQELAPRSEARLKAIDIGTGSGAIAVTLALQA 150

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESV 178
           P ++ +  DIS +ALE+A  NA    +    +  Q +      GL  D++VSNPPYI + 
Sbjct: 151 PSWELLASDISPEALEVATRNAK--QLHANVEFRQGNLLEPFAGLAPDILVSNPPYIPAE 208

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            ++ L  EVRD++PR +LDGG DGL+ YR +   +        L + E+G  Q  DV  +
Sbjct: 209 DIEGLQPEVRDYEPRTALDGGRDGLNPYRIMMAQLPLLSAPPRLIAFELGMGQAGDVAEL 268

Query: 239 FESRK-LFLVNAFKDYGGNDRVLL-FCR 264
                    +    D  G DR +L  CR
Sbjct: 269 LRQAGHWQEIVTVPDLAGIDRHVLGICR 296


>gi|324992932|gb|EGC24852.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK405]
 gi|325687438|gb|EGD29459.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK72]
          Length = 276

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDREQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + ILD+GTG+GA+ L L    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    HL K G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDRFGKDRMV 271


>gi|330502034|ref|YP_004378903.1| HemK family modification methylase [Pseudomonas mendocina NK-01]
 gi|328916320|gb|AEB57151.1| HemK family modification methylase [Pseudomonas mendocina NK-01]
          Length = 277

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
                 +   P+  LD  Q+      + R    E +  ILG + F+++ L ++  T  PR
Sbjct: 32  NKPRSYLRTWPERDLDSAQQAQFNAFMQRRRSGEPVAYILGHQGFWSLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TELLV++AL      +     +  LDLGTGTGA+ LAL  E P ++  GVD   +A+ 
Sbjct: 92  PDTELLVETALD-----LLPATPLVALDLGTGTGAIALALASERPAWQVTGVDRIEEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +      + S WFS++ G  + +I+SNPPYI +        +VR F+P  
Sbjct: 147 LAERNRQRLQLG-NARFVHSHWFSALPGQRYGLILSNPPYIRADDQHLEQGDVR-FEPSS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HL   G   +E G++Q VDV R+        V + +D G
Sbjct: 205 ALVAGNDGLDDIRAIIQAAPDHLLSGGWLLLEHGFDQAVDVRRLLADGGFVEVESRRDLG 264

Query: 255 GNDRVLLFC 263
           G++R+ L  
Sbjct: 265 GHERISLGR 273


>gi|228911167|ref|ZP_04074973.1| Protein hemK [Bacillus thuringiensis IBL 200]
 gi|228848530|gb|EEM93378.1| Protein hemK [Bacillus thuringiensis IBL 200]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G          D  S  +      DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKSLGAE--VTFYHGDLLSPFDKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|229087818|ref|ZP_04219934.1| Protein hemK [Bacillus cereus Rock3-44]
 gi|228695493|gb|EEL48362.1| Protein hemK [Bacillus cereus Rock3-44]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    + + Q    T  I + +    +  ++G+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGLMMNMREEISEEQEKTFTEFIHKHVDGIPVQYMMGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L   + R+  +  + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLDR-VQRMFGKQELHVADIGTGSGAISITLALENQNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+A+ NA  N +         D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAKESIEVAQENA--NALGANVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + E+G  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEVGIGQGEDVKGLLQKTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 YAHVEVVFDINGKDRMVFA 280


>gi|78065072|ref|YP_367841.1| modification methylase HemK [Burkholderia sp. 383]
 gi|77965817|gb|ABB07197.1| [protein release factor]-glutamine N5-methyltransferase
           [Burkholderia sp. 383]
          Length = 280

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 125/261 (47%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D+ LD            R L  E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDATLDAAAVERYRALEARRLAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       L+SDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSPAALAVAQRNAGKLLDARRPGGPLHWLESDWYAALDPALAFDTIVSNPPYIAQHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   +L   G   +E GY+Q   V  + 
Sbjct: 195 PHLAQGDLR-FEPRGALTDDADGLSAIRTIVAGAGTYLKPGGTLWIEHGYDQAEAVRAVL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFVAVESLADLAAIERTT 274


>gi|229050999|ref|ZP_04194548.1| Protein hemK [Bacillus cereus AH676]
 gi|228722376|gb|EEL73772.1| Protein hemK [Bacillus cereus AH676]
          Length = 283

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEEQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R  +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRFLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|261365336|ref|ZP_05978219.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC
           25996]
 gi|288566276|gb|EFC87836.1| protein-(glutamine-N5) methyltransferase [Neisseria mucosa ATCC
           25996]
          Length = 287

 Score =  265 bits (677), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 119/265 (44%), Gaps = 15/265 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L +  G S  Q+I      +       L +   R L  E I  I+G R+FY    
Sbjct: 28  EARMLLQKAGGYSRVQLITQGVEAIPADIFARLDSLAERRLNGEPIAYIIGGREFYGRWF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +  D   PRPETE LV++ +             R+ DLGTG+GAV + +  E    +  
Sbjct: 88  EVCPDVLIPRPETEHLVEAVIEHL------PKNGRVWDLGTGSGAVAVTVALERKDAEVR 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF------SSVEGLFDVIVSNPPYIESVI 179
             DIS +AL +A+ NA   G +   +     WF      S  +  FDVIVSNPPYIE+  
Sbjct: 142 ASDISRQALVVARRNAENLGAA--VEFASGSWFDTDKTSSEDKYRFDVIVSNPPYIEADD 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+ +L    DGL+  R +A      L + G   +E GYNQ   V +I 
Sbjct: 200 SHLNQGDLR-FEPQTALTDFADGLTCIRELAQRAPEFLKEGGWLLLEHGYNQGGAVRQIL 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +   +D  G DR+ L  R
Sbjct: 259 SENGFTEIETRQDLAGLDRLTLGVR 283


>gi|186477470|ref|YP_001858940.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phymatum STM815]
 gi|184193929|gb|ACC71894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia phymatum STM815]
          Length = 283

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G    ++I   D  LD  Q     N   R    E + +++G R+F+ 
Sbjct: 18  PALEARILLGHALGWRRTELITRADHPLDSAQVAAFRNLETRRAAGEPVAQLIGSREFFG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ D   PRPETELLV++A+       E     R+LDLGTGTGA+ +++    P  
Sbjct: 78  LDFDVTRDVLIPRPETELLVETAVQAL---EEHGARSRVLDLGTGTGAIAVSIAWSRPDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
           +   VD S +AL +A+ NAV     +R         SDW+S+++    F+VIVSNPPYI 
Sbjct: 135 RVWAVDRSEEALSVARRNAVRLLEPKRPGGDLRFALSDWYSALDASLVFEVIVSNPPYIA 194

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S        ++R F+PR +L    DGLS  R I       L  +G+  +E GY+Q   V 
Sbjct: 195 SGDPHLSQGDLR-FEPRGALTDEADGLSAIRAIVASAPARLVPNGVLWMEHGYDQAQAVR 253

Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259
            +  ++    + +  D  G +R+
Sbjct: 254 AMLAAQGFADIRSECDLAGIERI 276


>gi|218900454|ref|YP_002448865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus G9842]
 gi|218544940|gb|ACK97334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus G9842]
          Length = 283

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|75674574|ref|YP_316995.1| modification methylase HemK [Nitrobacter winogradskyi Nb-255]
 gi|74419444|gb|ABA03643.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 298

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 101/261 (38%), Positives = 141/261 (54%), Gaps = 1/261 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      V  L    +I      LD+     L     R L  E I RILG ++F+ 
Sbjct: 29  AALDARMLTGAVLDLDLTGLIAQGLRQLDEDDAARLDAFARRRLAGEPIARILGTKEFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS+DT  PR +TE +V++AL         ++ +RI DLGTG+GA+ LALL E P  
Sbjct: 89  LPLKLSADTLVPRADTETVVEAALGVLRAEGRTQEPLRIADLGTGSGAILLALLTELPKA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG D+S  AL+ A++NA   G++ R   L SD+   + G FD+IVSNPPYI S  +  
Sbjct: 149 TGVGTDLSAAALDTARANAQGVGLAARSRFLVSDYADGLSGQFDLIVSNPPYIRSADIPT 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DP ++LDGG+DGL  YR IA   +  L   GL  +EIG  Q   V  +  + 
Sbjct: 209 LAPEVRDHDPHLALDGGLDGLDAYRRIAPRAAALLADGGLLVLEIGQGQGGAVTPLVSAA 268

Query: 243 KLFLVNAFK-DYGGNDRVLLF 262
            L ++ + + D  G  R ++ 
Sbjct: 269 GLTVMGSVRADLAGIGRAVVA 289


>gi|148258773|ref|YP_001243358.1| putative methyltransferase hemK [Bradyrhizobium sp. BTAi1]
 gi|146410946|gb|ABQ39452.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [Bradyrhizobium sp. BTAi1]
          Length = 295

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 92/260 (35%), Positives = 136/260 (52%), Gaps = 2/260 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +     L    +++     L      +L   + R L  E + RILG ++F+ 
Sbjct: 29  PELDARLLVGHALQLDLTGLVMHGQRALSAADITWLEALMQRRLAGEPVARILGTKEFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS+DT  PRP+TE +V+ AL       + +  +RI DLGTG+GA+ LALL E P  
Sbjct: 89  LELHLSADTLVPRPDTETVVELALEHLAAGGDLKRPLRIADLGTGSGAILLALLSELPAA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG DIS  AL+ A+ NA   G+ +R   +   + S++   FD+IVSNPPYI S  +D 
Sbjct: 149 YGVGTDISHAALQTARDNARILGLGDRAGFIAGSYASALSPPFDLIVSNPPYIPSREIDD 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L ++VR +DP  +LDGG DGL  YR +    ++ L   G   VE+G  Q  DV  +  + 
Sbjct: 209 LAIDVRAYDPLRALDGGADGLDAYRALIPQAAQLLQPGGTLVVEVGQGQSEDVAELMRAA 268

Query: 243 KLFL--VNAFKDYGGNDRVL 260
           +L +       D  G  R +
Sbjct: 269 RLAIDSSAIKADLAGIPRAV 288


>gi|182420255|ref|ZP_02951484.1| methyltransferase, HemK family [Clostridium butyricum 5521]
 gi|237666626|ref|ZP_04526611.1| modification methylase, HemK family [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182375850|gb|EDT73442.1| methyltransferase, HemK family [Clostridium butyricum 5521]
 gi|237657825|gb|EEP55380.1| modification methylase, HemK family [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 585

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V       +I   +  +   Q       I +  K   +  IL   +F  
Sbjct: 325 ARLDTELLLGNVIEKERLYLITHKEETIGKDQCDEFFELIEKRRKKMPVKYILNKCEFMG 384

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PR +TELLVD  L      I + D  +I DL  G+GA+ ++L       
Sbjct: 385 IDLHVEEGVLIPRDDTELLVDEVLK----NISEDDEKQICDLCCGSGAIGISLACLRKNI 440

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
           K   +D      ++   N   + + ER    +SD           +D+IVSNPPYIE   
Sbjct: 441 KVDLLDYYPIPEKVTLINIEKHNLQERVSFSKSDLLDVSIKASKKYDIIVSNPPYIEEEE 500

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  +V+ ++P  +L GGIDGL  Y+ I +     LN++G+ + EIGYNQ   V  + 
Sbjct: 501 IEKLMDDVQKYEPHTALSGGIDGLDFYKKIVNQSIEVLNENGILAFEIGYNQGKAVKSLM 560

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      V   KD+   DR+++ 
Sbjct: 561 EENNFKDVRVIKDFASLDRIVIG 583


>gi|99080783|ref|YP_612937.1| HemK family modification methylase [Ruegeria sp. TM1040]
 gi|99037063|gb|ABF63675.1| modification methylase HemK family [Ruegeria sp. TM1040]
          Length = 278

 Score =  264 bits (676), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 135/262 (51%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G RDFY
Sbjct: 23  DPARDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSHLVGERDFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++ALA            R+LDLG G+G + + LL E   
Sbjct: 83  GRRFKVSGDVLDPRPETETLIEAALA--------EPFERVLDLGVGSGCILVTLLAEQQR 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G+GVD+S  A   A +NAV + V  R D  QS+WFS+VEG FD+IVSNPPYI    +D
Sbjct: 135 ARGLGVDLSEAACLQASANAVLHRVEARADIRQSNWFSAVEGQFDLIVSNPPYIALEEMD 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRD +P+++L  G DGLS YR I  G++ HL  +G   VEIG  Q   V ++   
Sbjct: 195 GLSAEVRDHEPQMALTDGADGLSAYRQICAGLAPHLAANGRVMVEIGPTQGPAVAQMMRE 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V+   D  G DRV+   
Sbjct: 255 TGLRDVSVLPDLDGRDRVVFGR 276


>gi|294650078|ref|ZP_06727462.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292824029|gb|EFF82848.1| protein-glutamine N-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 273

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 11/263 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            +++   L  + G++S ++ +  +  L + Q     + + R  + E +  + G + F+ +
Sbjct: 18  RQEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTL 77

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ DT  PRP+TE+LV++ L  SL          I+DLGTGTGA+ LAL  E P + 
Sbjct: 78  DLKVTHDTLVPRPDTEILVETVLKLSLD-----PQANIVDLGTGTGAIALALASERPQWS 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVD 181
               DI    L++A+ NA+ +G+S         WF ++  +  FD+IVSNPPYI+   V 
Sbjct: 133 VTATDIYQPTLDVAQDNALKHGLSL-VKFACGAWFEALVEQQQFDLIVSNPPYIDPDDVH 191

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +P  +L     GL+    I       L   G  ++E GY+Q+  V  IFE 
Sbjct: 192 MQK---LKSEPERALIAANHGLADIEIIIAQGKAWLKAKGWIALEHGYDQRQAVREIFEL 248

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                +   KDYGGNDRV L  +
Sbjct: 249 HGFEQIQTIKDYGGNDRVSLAQK 271


>gi|71083225|ref|YP_265944.1| hypothetical protein SAR11_0519 [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062338|gb|AAZ21341.1| HemK [Candidatus Pelagibacter ubique HTCC1062]
          Length = 280

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               DS   L          +I++P  VL+  Q     + I R  K E I  ++  ++F+
Sbjct: 21  NPQLDSEILLSNSIKRDKKYIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D   PRP++EL+++  L        K D +++LD+GTG+G + L++LKE   
Sbjct: 81  KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSN 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           F G G+DIS K++ ++K NA    ++ R     S   +   G +D++VSNPPYIE + + 
Sbjct: 137 FYGTGIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLK 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V +F+P+++L GG DG S  R + +  +  + K+G   +EIG+NQK  V++I + 
Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKTNNLIKKNGKFILEIGFNQKNKVIKILKE 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              ++  A KDYG NDR ++  +
Sbjct: 257 EGFYVNKAIKDYGNNDRCVISTK 279


>gi|296113366|ref|YP_003627304.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
 gi|295921060|gb|ADG61411.1| protein methyltransferase HemK [Moraxella catarrhalis RH4]
 gi|326559851|gb|EGE10251.1| protein methyltransferase HemK [Moraxella catarrhalis 7169]
 gi|326560801|gb|EGE11168.1| protein methyltransferase HemK [Moraxella catarrhalis 103P14B1]
 gi|326563538|gb|EGE13797.1| protein methyltransferase HemK [Moraxella catarrhalis 12P80B1]
 gi|326569661|gb|EGE19713.1| protein methyltransferase HemK [Moraxella catarrhalis BC1]
 gi|326570144|gb|EGE20189.1| protein methyltransferase HemK [Moraxella catarrhalis BC8]
 gi|326570883|gb|EGE20907.1| protein methyltransferase HemK [Moraxella catarrhalis BC7]
 gi|326574432|gb|EGE24374.1| protein methyltransferase HemK [Moraxella catarrhalis 101P30B1]
 gi|326575975|gb|EGE25898.1| protein methyltransferase HemK [Moraxella catarrhalis CO72]
          Length = 295

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 10/259 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  V       ++ D D      +   +T  I++    + +  + G + F+     +++
Sbjct: 37  WLMHVLDKPFIFLMTDEDYQPTLEESSKITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNA 96

Query: 70  DTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            T  PR +TE+LV++ L ++  +      + +++V ILDLGTGTG + + L  E  F + 
Sbjct: 97  HTLIPRADTEILVETILNYAKAQQKIRQTDNKNLVNILDLGTGTGCIGITLALELEFAQV 156

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDIS +AL++A+ N   + ++ R   LQS W   V G FD+IVSNPPYI+      + 
Sbjct: 157 VLVDISSEALKVAEQN--NHRLNARCQLLQSHWLQKVSGQFDIIVSNPPYIKENDEHLVN 214

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                 +P  +L    DGL+  R I +    +L   GL ++E G++Q   V  ++ S   
Sbjct: 215 ---LKHEPITALVAAEDGLTDIRHIIETGRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGY 271

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +DYGGNDRV L  
Sbjct: 272 LDVYTIQDYGGNDRVTLGR 290


>gi|322517016|ref|ZP_08069905.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           vestibularis ATCC 49124]
 gi|322124433|gb|EFX95930.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           vestibularis ATCC 49124]
          Length = 277

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +   +   H+    ILG+ DF+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDAELLAHVFSQLKNHKPAQYILGYEDFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET+ LVD  LA +         ++ILD+GTG+GA+ ++L K  PF++    D+S  AL +
Sbjct: 94  ETKELVDLILAEN-----PSSELKILDIGTGSGAISVSLKKSCPFWQVTASDLSADALVL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA  N V      +QSD F ++ G FD+IVSNPPYI     D +GL V   +P+++L
Sbjct: 149 AKENAKLNQVD--ISFVQSDVFENISGSFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +GL+ YR I +  +++L   G    EIGY Q +D+ R+         V   KD  G
Sbjct: 207 FADEEGLAIYRQIIEDATKYLTPKGKLYFEIGYKQGLDLKRLLSLHFPDKHVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|163739712|ref|ZP_02147120.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis BS107]
 gi|161386942|gb|EDQ11303.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis BS107]
          Length = 285

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G R+FY
Sbjct: 25  DPARDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSHLIGEREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++ALA            R+LDLG G+G + + LL E   
Sbjct: 85  GRRFKVSGDVLDPRPETECLIEAALA--------EPFSRVLDLGLGSGCILVTLLAEQAD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  A   A +NAV + V  R + LQSDWFS+V+G FD+IVSNPPYI    + 
Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEVLQSDWFSAVDGQFDLIVSNPPYIALDEMS 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA  +  +L   G   +EIG  Q   V  +  S
Sbjct: 197 GLSDEVRGHEPEMALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V   +D  G DRV+
Sbjct: 257 AGLKEVRVIQDLDGRDRVV 275


>gi|83951818|ref|ZP_00960550.1| modification methylase, HemK family protein [Roseovarius
           nubinhibens ISM]
 gi|83836824|gb|EAP76121.1| modification methylase, HemK family protein [Roseovarius
           nubinhibens ISM]
          Length = 275

 Score =  264 bits (676), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  R++   +    GL   ++ +     L           + R    E +  ILG R FY
Sbjct: 21  EGAREARLLMAAALGLDPSRMTLHLHDDLGPEGAARFEALLARRAAREPMSHILGQRQFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE LV +AL             R+LDLGTG+G + L+LL E   
Sbjct: 81  GRAFKVTGDVLDPRPETECLVAAALEEGFE--------RVLDLGTGSGCILLSLLAEREG 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G+G D+S  AL++A+ NA   G++ R    ++DWF  V G +D+IVSNPPYI    + 
Sbjct: 133 AQGLGADVSAAALDVARENAARLGLASRAAFQEADWFKGVAGQYDLIVSNPPYIGIAEMP 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E    +PR +L    DGLS YR IA GV  HL   G   VEIG  Q  DV RIF  
Sbjct: 193 ELAPE-LAHEPRAALTDEGDGLSAYRAIAAGVLAHLVPGGRILVEIGRTQGADVARIFAE 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V   +D  G DRV++  
Sbjct: 252 AGLQAVELRQDLDGRDRVVMAR 273


>gi|320160373|ref|YP_004173597.1| putative modification methylase HemK [Anaerolinea thermophila
           UNI-1]
 gi|319994226|dbj|BAJ62997.1| putative modification methylase HemK [Anaerolinea thermophila
           UNI-1]
          Length = 287

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +       V       +   P+++L D Q   L   + R L+   +  + G ++F+ 
Sbjct: 25  AGIEVQVLAAHVLKRPRAWIAAHPETLLSDEQASHLNTLLGRLLEGVPLPYLTGKQEFFG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S     PRPETE LV++AL + L R  +R+  R+ D+GTG+G + +++    P  
Sbjct: 85  LEFEVSPAVLIPRPETETLVEAALQW-LKRFPERN--RVADVGTGSGCIAVSIAYHMPNV 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +  D S +AL++A+ N   +GVS+R   +Q D  S+  G+FD++ +N PYI +  +D 
Sbjct: 142 RVLATDFSHEALKVAQRNVNRHGVSDRVQLIQCDLLSACAGMFDLVCANLPYIPTSALDE 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES- 241
                  F+P  +LDGG  G    + +     R L   G   +EI ++Q   V  I    
Sbjct: 202 TPP--ARFEPIAALDGGESGWEKIKALLQDAPRWLVPGGCILLEIQWDQGQTVSEIARGI 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +   +D    DRV+L  
Sbjct: 260 FPAAEIQILQDLAHLDRVVLIQ 281


>gi|91762345|ref|ZP_01264310.1| HemK [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718147|gb|EAS84797.1| HemK [Candidatus Pelagibacter ubique HTCC1002]
          Length = 280

 Score =  264 bits (675), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 143/263 (54%), Gaps = 4/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               DS   L          +I++P  VL+  Q     + I R  K E I  ++  ++F+
Sbjct: 21  NPQLDSEILLSNSIKRDKKHIILNPKEVLNSEQLRKFKSLIERRKKGEPIAYLINKKEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D   PRP++EL+++  L        K D +++LD+GTG+G + L++LKE   
Sbjct: 81  KDEFFVNKDVLIPRPDSELIIEQVLKI----YSKDDHLQLLDIGTGSGCILLSILKERSN 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           F G G+DIS K++ ++K NA    ++ R     S   +   G +D++VSNPPYIE + + 
Sbjct: 137 FYGTGIDISKKSINVSKFNAKQLNLTNRVKFFHSSVDNFNNGKYDIVVSNPPYIEQLSLK 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +V +F+P+++L GG DG S  R + +  S  + K+G   +EIG+NQK  V++I + 
Sbjct: 197 YLEKDVVNFEPKLALSGGFDGFSKIRKVINKASILIKKNGKFILEIGFNQKNKVIKILKE 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              ++  A KDYG NDR ++  +
Sbjct: 257 EGFYVNKAIKDYGNNDRCIISTK 279


>gi|221213332|ref|ZP_03586307.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD1]
 gi|221166784|gb|EED99255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia multivorans CGD1]
          Length = 280

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + +++G R+F+    
Sbjct: 19  DARVLLAHALGWTRTQLITRGDRPLDAEAVERYRVLEARRAAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGLAHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSAAALAVAQRNADKLLDARRPGGPLQWLQSDWYAALDPALAFDAIVSNPPYIARHD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGLS  RTI  G   HL   G   +E GY+Q   V  + 
Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLSAIRTIVAGARAHLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            S     V +  D    +R  
Sbjct: 254 ASHGFDAVESLADLAAIERTT 274


>gi|239501458|ref|ZP_04660768.1| methyl transferase [Acinetobacter baumannii AB900]
          Length = 273

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/255 (30%), Positives = 121/255 (47%), Gaps = 10/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q      ++ R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLASLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L++AK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  +F       +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRNVFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLF 262
              +DYG NDRV   
Sbjct: 254 RTIQDYGRNDRVTFA 268


>gi|169795524|ref|YP_001713317.1| methyl transferase [Acinetobacter baumannii AYE]
 gi|213158535|ref|YP_002319833.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
 gi|215483011|ref|YP_002325216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB307-0294]
 gi|301344981|ref|ZP_07225722.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB056]
 gi|301513509|ref|ZP_07238746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB058]
 gi|301597422|ref|ZP_07242430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB059]
 gi|332850712|ref|ZP_08432959.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332866987|ref|ZP_08437304.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013113]
 gi|169148451|emb|CAM86317.1| methyl transferase [Acinetobacter baumannii AYE]
 gi|213057695|gb|ACJ42597.1| protein methylase, HemK family [Acinetobacter baumannii AB0057]
 gi|213988463|gb|ACJ58762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter baumannii AB307-0294]
 gi|332730549|gb|EGJ61865.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332734316|gb|EGJ65444.1| protein-(glutamine-N5) methyltransferase [Acinetobacter baumannii
           6013113]
          Length = 271

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 10/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEYFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    L++AK NA T+G+          WF ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLFC 263
            + +DYG NDRV L C
Sbjct: 254 KSIQDYGRNDRVTLAC 269


>gi|332285703|ref|YP_004417614.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
 gi|330429656|gb|AEC20990.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
          Length = 285

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              + H    +V  +S   +I      L         +   R L  E +  ILG+++F  
Sbjct: 26  PRLEVHMLWQQVLQVSRAWLIAHDRDPLAPEAIARFHDLQARRLAGEPMAYILGYKEFMG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PRPETELLV++AL +    +++    R+LDLGTG GA+ +++   +   
Sbjct: 86  RDFRVSPGVLIPRPETELLVETALDY----LQRCRAPRVLDLGTGAGAIAISIALNASGA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIV 180
                D+S  AL +A+ NA   G   R + L   W+ ++ G   FD+IVSNPPYI +   
Sbjct: 142 SIAATDVSMDALAVARQNAQALGA--RVEFLSGSWYDALVGHSGFDLIVSNPPYIAACDP 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L  G DGLS  RTI  G    L       +E G++Q   V ++ +
Sbjct: 200 HLAQGDLR-FEPVQALTDGSDGLSALRTIVQGAGARLKPGAALFLEHGWDQAKAVRQLLQ 258

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                 V + +D  G +RV
Sbjct: 259 QAGFTQVASLQDLAGIERV 277


>gi|301299953|ref|ZP_07206180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852435|gb|EFK80092.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 279

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 7/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D    +C   G    Q++++  + +DD+    L   I    +   +  ++G++DFY +
Sbjct: 24  LEDVDYLICGQMGWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      + 
Sbjct: 84  RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       +
Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF+   
Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDNF 257

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD  GNDR++
Sbjct: 258 PNSEITLKKDINGNDRMI 275


>gi|50085502|ref|YP_047012.1| methyl transferase [Acinetobacter sp. ADP1]
 gi|49531478|emb|CAG69190.1| methyl transferase [Acinetobacter sp. ADP1]
          Length = 274

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 136/261 (52%), Gaps = 10/261 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            +++   L  +  L+S ++ +    +L   Q     + ++R  K E +  I G + F+++
Sbjct: 18  RQEAMWLLEHILELNSLELKMRQMQILTQEQEQQYLDGLMRLSKGEPLAYITGSQPFWSL 77

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ DT  PRP+TE+L+++ L+  LP     +   ++DLGTGTGA+ L+L KE P++K
Sbjct: 78  DLNVTPDTLVPRPDTEILIETVLSLDLP-----EHCSMVDLGTGTGAIALSLAKERPYWK 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            +  DI    LE+A+SNA  + +  +   L S WF ++    FD+IVSNPPYI++     
Sbjct: 133 ILATDIYFPTLEVAQSNAKKHAL-NQVKFLCSAWFEAIPSQKFDLIVSNPPYIDANDEHM 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L       +PR +L     GL+    I       LN  G  +VE GY+Q   V ++    
Sbjct: 192 LN---LGTEPRRALVADKHGLADLEQIIGQAVLWLNTHGWIAVEHGYDQGQAVCQLLMDH 248

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KDYGGNDR+ L  
Sbjct: 249 NFAKVQTCKDYGGNDRISLGQ 269


>gi|260576768|ref|ZP_05844753.1| modification methylase, HemK family [Rhodobacter sp. SW2]
 gi|259021020|gb|EEW24331.1| modification methylase, HemK family [Rhodobacter sp. SW2]
          Length = 284

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+   L    GL   ++ +     L       L   +    + + + +I G R F+
Sbjct: 23  DAARDARHLLAHAMGLPPDRLTLHLADPLTPDAAALLAANLAARSQRQPVSQITGNRLFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE L+ +ALA        +   R+LDLGTG+G + L LL E P 
Sbjct: 83  GRNFRVTQDVLDPRPETESLIAAALA--------QPFQRVLDLGTGSGVLLLTLLAERPA 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D+S  AL +A++NA T  ++ R     SDW ++V G +D++V+NPPYI    + 
Sbjct: 135 ASGLGIDLSPAALNVAQANAETLSLANRATFALSDWLTAVPGQYDLVVANPPYIAEAEMA 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA GV+ HL   G   VEIG  Q   V  +F +
Sbjct: 195 ALAPEVRLWEPHLALTPGGDGLDAYRAIAAGVAPHLAPGGRLLVEIGPTQAQAVSGLFRA 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  +    D  G DRV+   
Sbjct: 255 CGLPDIRVLPDLDGRDRVISAQ 276


>gi|312863896|ref|ZP_07724134.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus vestibularis F0396]
 gi|311101432|gb|EFQ59637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus vestibularis F0396]
          Length = 277

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +   +   H+    ILG+ DF+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDAELLAHVFSQLKNHKPAQYILGYEDFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET+ LVD  LA +         ++ILD+GTG+GA+ ++L K  PF++    D+S  AL +
Sbjct: 94  ETKELVDLILAEN-----PSSELKILDIGTGSGAISVSLKKSCPFWQVTASDLSADALVL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA  N V      +QSD F ++ G FD+IVSNPPYI     D +GL V   +P+++L
Sbjct: 149 AKENAKLNQVD--ISFVQSDVFENISGSFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +GL+ YR I +  +++L   G    EIGY Q +D+ R+         V   KD  G
Sbjct: 207 FADEEGLAIYRQIIEDATKYLTPKGKLYFEIGYKQGLDLKRLLSLHFPDKHVRILKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|255994692|ref|ZP_05427827.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC
           49989]
 gi|255993405|gb|EEU03494.1| protein-(glutamine-N5) methyltransferase [Eubacterium saphenum ATCC
           49989]
          Length = 307

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/271 (35%), Positives = 134/271 (49%), Gaps = 14/271 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ---------RFFLTNAIVRSLKHESIH 52
            A  ++    C   G+S  ++++     L  RQ              + I R LK + + 
Sbjct: 33  DAQGEAVCLFCFAAGISKSELLLRQSRALSPRQGRSAFGEDVYRKYDSIIARRLKRKPLQ 92

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGA 110
            ILG  +F+     +      PR ETELLV+  L     L    +   +++LDL TGTG 
Sbjct: 93  HILGSVNFFGFDFKVDERALIPRFETELLVEKTLEKIEVLQNETREKSIKVLDLCTGTGV 152

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIV 169
           + + + K  P  +    DIS  ALE+A  N+ +     R   +QSD F    +  FD+IV
Sbjct: 153 IGITVKKTIPDVECTLSDISSDALELAADNSKSLKADVRI--VQSDLFEEFADEKFDIIV 210

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI    +D L LEVR+FDP ++LDGG DGL  YR IAD V  +L + G    EIG 
Sbjct: 211 SNPPYIRRADIDKLQLEVREFDPHLALDGGEDGLELYRNIADEVQNYLKRSGYLICEIGA 270

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +Q  DVV+IF+          KD+   DR+L
Sbjct: 271 DQGDDVVKIFKEAGAVNARIIKDFTDKDRIL 301


>gi|21674307|ref|NP_662372.1| HemK protein [Chlorobium tepidum TLS]
 gi|21647480|gb|AAM72714.1| hemK protein [Chlorobium tepidum TLS]
          Length = 294

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +    +   L  V GL   Q+ +D +  L  ++      A    L+   +  I G   FY
Sbjct: 27  EPRLSAELLLGHVLGLQRLQLYLDHERPLTLKELEAFRAACRERLQGRPVQYIAGEAFFY 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +  +      PRPETEL+++ A+   +   ++  D   ILD+GTG+G + + L    P
Sbjct: 87  GYQFFVDERVLIPRPETELVLEHAMERLAASGLDSADSPSILDVGTGSGCIAITLALRLP 146

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYI 175
             +    D+S  AL++A+ NA  +GVSER   +++D  S     +V G FD++VSNPPYI
Sbjct: 147 GARVTAADVSADALDVARRNADAHGVSERIRFVEADALSASFADAVGGPFDLLVSNPPYI 206

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  L  EVR ++PR++L     G  +Y++IA      L K G+   E+  +   +V
Sbjct: 207 PEAEWATLQEEVRRYEPRLALVA-PTGFEYYQSIAVAAPSLLRKGGVLCFELHADGAAEV 265

Query: 236 VRIFESRKLFLVNAFKDYGGNDR 258
             +  S     V   +DY   DR
Sbjct: 266 RNLLGSS-FADVQVMQDYNKLDR 287


>gi|327462228|gb|EGF08555.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1]
 gi|327489583|gb|EGF21375.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1058]
          Length = 276

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 127/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLQTEVSLEDREQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + ILD+GTG+GA+ L L    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSENRE-----SSLSILDIGTGSGAIALTLANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSGDALSLATENAQSCGLS--LTFIQSDCFEAISGNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    HL K G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDHLTKKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDRFGKDRMV 271


>gi|332970820|gb|EGK09799.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp.
           1501(2011)]
          Length = 300

 Score =  264 bits (675), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 26/283 (9%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A   S   L  +   S   +I D    L + ++      I +      +  + G + F
Sbjct: 20  LPAHWVSDWLL-HILQKSPSFLITDGGYQLTEAEQAQFNTGIAQMQASTPLAYLTGKQAF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR---------ILDLGTGTGAV 111
           +++   ++  T  PRP+TE+LV+  L +         V+          +LDLGTG+G +
Sbjct: 79  WSLEFEVNEYTLIPRPDTEVLVEQVLDWITQHKNSLSVLNDEPILAPYQLLDLGTGSGCI 138

Query: 112 CLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---- 162
            ++L  E        ++   +D S +AL +AK NA  N VS     LQSDWFS+++    
Sbjct: 139 AISLAHELATIYPKQWQVTALDFSTEALAVAKRNAQLNAVS-NIQFLQSDWFSALKRSED 197

Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
               LFD+IVSNPPYI          +    +P  +L    +GL   + I +    +L +
Sbjct: 198 TDQPLFDIIVSNPPYIVDNDQHL---DKLKAEPLSALVAPDNGLGDIKQIVEQARDYLVR 254

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            GL +VE GY+Q   V ++F       V   KDYGGNDRV L 
Sbjct: 255 GGLLAVEHGYDQGELVCQMFTDFGYAQVKTLKDYGGNDRVTLG 297


>gi|228968457|ref|ZP_04129446.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228791237|gb|EEM38850.1| Protein hemK [Bacillus thuringiensis serovar sotto str. T04001]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    +++ Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKMNRTGLLMNMREEINEEQEASFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKAGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQEKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|169633251|ref|YP_001706987.1| methyl transferase [Acinetobacter baumannii SDF]
 gi|169152043|emb|CAP00927.1| methyl transferase [Acinetobacter baumannii]
          Length = 273

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/255 (31%), Positives = 121/255 (47%), Gaps = 10/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     ++S ++    +  L  +Q       + R    E +  + G + F+ + L ++
Sbjct: 23  WLLEHFLKINSLELKFRLEQELTAQQEQDYLAGLERIQNGEPLAYVTGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           SDT  PRP+TE+LV++ L  +LP+        I+DLGTGTGA+ LAL  E P +     D
Sbjct: 83  SDTLVPRPDTEVLVETVLNLNLPK-----NANIVDLGTGTGAIALALASERPDWFVTATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I    LE+AK NA T+G+          W+ ++E   FD+IVSNPPYI+         + 
Sbjct: 138 IYAPTLEVAKENAQTHGL-HHVKFACGVWYEALEPQQFDLIVSNPPYIDPEDEHM---QA 193

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              +PR +L     GL+    I       L   G  ++E GY+Q   V  IF       +
Sbjct: 194 LATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQAVRGIFAEHGFSEI 253

Query: 248 NAFKDYGGNDRVLLF 262
              +DYG NDRV L 
Sbjct: 254 RTIQDYGRNDRVTLA 268


>gi|256845603|ref|ZP_05551061.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_36A2]
 gi|256719162|gb|EEU32717.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fusobacterium sp. 3_1_36A2]
          Length = 383

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  +S + +       + +  +  +    ++R+ K + +  ILG  +FY
Sbjct: 104 PLLDTEYIFSDVLKVSRNTLKYSMSREIKEEDKDKIREMLVLRAKKRKPLQYILGEWEFY 163

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E   
Sbjct: 164 GLPFKVSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 219

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N + E  + ++SD F  ++    +D+IVSNPPYI    
Sbjct: 220 SSVTGIDINEKAIELANENKTLNKI-ENVNFIKSDLFEKIDKDFKYDLIVSNPPYISKNE 278

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++++P+ +L    DGL  YR ++     +L      + EIGYNQ  DV +I 
Sbjct: 279 YETLMSEVKNYEPQNALTDLGDGLYFYREMSKLAGEYLKDTAYLAYEIGYNQAKDVTKIL 338

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGNDRV++  +
Sbjct: 339 QNNNFDILSVIKDYGGNDRVVIAKK 363



 Score = 40.9 bits (95), Expect = 0.19,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 18/45 (40%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  + + + + ++
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEEEKNSIKHYLKKMVE 66


>gi|308050534|ref|YP_003914100.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
           balearica DSM 9799]
 gi|307632724|gb|ADN77026.1| (protein release factor)-glutamine N5-methyltransferase [Ferrimonas
           balearica DSM 9799]
          Length = 279

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G     +   P+  L +     L   + R    E +  + G R+F++
Sbjct: 21  PRLDAELLLLSRLGKPRSFLFTWPEHELPEPLVANLAGLLARRQAGEPVAHLTGQREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TE LV++AL   LP     D   ++DLGTGTGA+ LAL  E P +
Sbjct: 81  LPLKVNATTLIPRPDTESLVEAALELGLP-----DDAEVVDLGTGTGAIALALKSEQPGW 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A++N+    +          WF  + G  FD+IVSNPPYI+     
Sbjct: 136 RISAVDRIADAVALARANSEALDLP--ITVHHGSWFEPLSGQRFDLIVSNPPYIDPQDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+  R +A+  + HL   G+  VE G++Q   V  IF  
Sbjct: 194 LGQGDVR-FEPRSALTADDHGLADIRHLAEAAANHLRAGGVLMVEHGWDQGEAVREIFRQ 252

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L  V   +D G  +R  L 
Sbjct: 253 AGLTSVRTGRDLGNRERFTLG 273


>gi|229099761|ref|ZP_04230686.1| Protein hemK [Bacillus cereus Rock3-29]
 gi|228683650|gb|EEL37603.1| Protein hemK [Bacillus cereus Rock3-29]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G          D  S    ++   DV+VSNPPYI       L 
Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RK 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQVFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 YAHVEVVFDINGKDRMVFA 280


>gi|312134917|ref|YP_004002255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor owensensis OL]
 gi|311774968|gb|ADQ04455.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor owensensis OL]
          Length = 288

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +  +   +VI++ D  ++  +   + NAI + L+   +        F  +   
Sbjct: 34  ALMMVSHILDIDKTEVILNKDLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL +     K + 
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCRFL-DCKVLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  R   ++S+ F ++     FD I+SNPPYI       L 
Sbjct: 149 VDISERALEVARKNAKLNGVENRVSFVRSNLFENIPKNLRFDAILSNPPYISESERFKLE 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +V   +P I+L    DGL  ++ IA+    +L   G    E+G++Q  +V RI E    
Sbjct: 209 KQVLK-EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             + + KD    +R +  
Sbjct: 268 ENIKSRKDLNNIERCIFA 285


>gi|229072795|ref|ZP_04205994.1| Protein hemK [Bacillus cereus F65185]
 gi|228710286|gb|EEL62261.1| Protein hemK [Bacillus cereus F65185]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGTPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|146318503|ref|YP_001198215.1| methylase of polypeptide chain release factors [Streptococcus suis
           05ZYH33]
 gi|146320694|ref|YP_001200405.1| methylase of polypeptide chain release factors [Streptococcus suis
           98HAH33]
 gi|253751629|ref|YP_003024770.1| methyltransferase [Streptococcus suis SC84]
 gi|253753531|ref|YP_003026672.1| methyltransferase [Streptococcus suis P1/7]
 gi|253755644|ref|YP_003028784.1| methyltransferase [Streptococcus suis BM407]
 gi|145689309|gb|ABP89815.1| Methylase of polypeptide chain release factors [Streptococcus suis
           05ZYH33]
 gi|145691500|gb|ABP92005.1| Methylase of polypeptide chain release factors [Streptococcus suis
           98HAH33]
 gi|251815918|emb|CAZ51532.1| putative methyltransferase [Streptococcus suis SC84]
 gi|251818108|emb|CAZ55902.1| putative methyltransferase [Streptococcus suis BM407]
 gi|251819777|emb|CAR45684.1| putative methyltransferase [Streptococcus suis P1/7]
 gi|292558284|gb|ADE31285.1| Modification methylase HemK [Streptococcus suis GZ1]
 gi|319758067|gb|ADV70009.1| methylase of polypeptide chain release factors [Streptococcus suis
           JS14]
          Length = 277

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  + ++     +    +  +     +  +H     I+G  DF+ +   +      PR
Sbjct: 33  GLNFTEFLLLLRQEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +         +RILD+GTG+GA+ ++L K  P ++ V VDIS  AL 
Sbjct: 93  PETEELVDLILQEN-----SGASLRILDIGTGSGAIAISLAKARPDWEVVAVDISNDALA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA TN VS     L+SD   +V G FD+IVSNPPYI     D +GL V   +P ++
Sbjct: 148 VAQENARTNQVS--VHFLESDVLQAVTGKFDIIVSNPPYISPDDTDEVGLNVLTSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG++ YR IA+     L ++G    EIGY Q  D+  +         +   KD  
Sbjct: 206 LFAEEDGMAIYRQIAEQAGAFLKENGKLYFEIGYKQGQDLTDLLALHFPQKQIRVLKDQF 265

Query: 255 GNDRVLLF 262
           G DR ++ 
Sbjct: 266 GQDRKVVA 273


>gi|309782947|ref|ZP_07677667.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia sp. 5_7_47FAA]
 gi|308918371|gb|EFP64048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia sp. 5_7_47FAA]
          Length = 300

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+ 
Sbjct: 28  PALEARMLVSHVTGLSRVQLITQDACAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL      +E+ D   +LD+GTG+G + + +       
Sbjct: 88  RTFKVTPAVLIPRPDTELLVEQALD----HLEECDAPAVLDMGTGSGIIAITIALARRDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +        DW+ ++ G      FD+I SNPPYI +
Sbjct: 144 RVWATDASTDALAVAIDNAKALGAT-NVQAALGDWYGALAGTEAPPAFDLIASNPPYIAA 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H R+I  G    L   G   VE GY+Q   V  
Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLRSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +        V   +D  G+DR 
Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283


>gi|310829055|ref|YP_003961412.1| hemK protein [Eubacterium limosum KIST612]
 gi|308740789|gb|ADO38449.1| hemK protein [Eubacterium limosum KIST612]
          Length = 304

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 4/267 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   L  V   +      DP   +         + I R    E +  I G ++F
Sbjct: 38  VSPRLDAEVLLASVLNCARITFYSDPQKAVSFEDAEEYRSRIDRRALLEPVAYITGEKEF 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119
             +   +S D   PRP+TE LV++ L   +P+I++     R+LDL TG+GA+ L+L    
Sbjct: 98  MGLVFHVSPDVLIPRPDTESLVEAILERVIPQIKQDTGKPRVLDLCTGSGAIGLSLKFFD 157

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
           P       DIS +AL++A  NA   G S     ++SD F  +     FD+IVSNPPYI  
Sbjct: 158 PSAVVTLTDISGRALKVAAENARNLGFS-NITMVESDLFKGLSKTEPFDLIVSNPPYIPD 216

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            I+  L  ++ D++P ++L GG+ G   Y  IA     +L K G   +E+G  Q+V V  
Sbjct: 217 GIIPTLQRDIVDYEPMLALSGGVTGYDLYERIAGETGPYLRKGGAIVLEVGNAQEVRVAE 276

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + E++    +    D  G  R ++  +
Sbjct: 277 LLEAQGFGAITMVPDLTGAVRGVVAWK 303


>gi|228924064|ref|ZP_04087340.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|228835554|gb|EEM80919.1| Protein hemK [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S     +   DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|163743156|ref|ZP_02150538.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383573|gb|EDQ07960.1| modification methylase, HemK family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 285

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 95/259 (36%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G R+FY
Sbjct: 25  DPARDARVLLAHAARIEASRVTLIAPEDLAPEIAERYEQLIALRAIRVPVSHLIGEREFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S D  +PRPETE L+++ALA            R+LDLG G+G + + LL E   
Sbjct: 85  GRRFKVSGDVLDPRPETECLIEAALA--------EPFSRVLDLGLGSGCILVTLLAEQAD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  A   A +NAV + V  R + LQSDWFS+VEG FD+IVSNPPYI    + 
Sbjct: 137 ATGVGVDLSEAACLQASANAVLHRVEPRAEILQSDWFSAVEGQFDLIVSNPPYIALDEMS 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA  +  +L   G   +EIG  Q   V  +  S
Sbjct: 197 DLSDEVRGHEPELALTDGGDGLGAYRVIAAELGGYLAPQGRVFLEIGPTQGAAVSDLLLS 256

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V   +D  G DRV+
Sbjct: 257 AGLKEVRIIQDLDGRDRVV 275


>gi|228955576|ref|ZP_04117578.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
 gi|229181576|ref|ZP_04308902.1| Protein hemK [Bacillus cereus 172560W]
 gi|229193580|ref|ZP_04320524.1| Protein hemK [Bacillus cereus ATCC 10876]
 gi|228589885|gb|EEK47760.1| Protein hemK [Bacillus cereus ATCC 10876]
 gi|228601944|gb|EEK59439.1| Protein hemK [Bacillus cereus 172560W]
 gi|228804104|gb|EEM50721.1| Protein hemK [Bacillus thuringiensis serovar kurstaki str. T03a001]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|206970195|ref|ZP_03231148.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH1134]
 gi|206734772|gb|EDZ51941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH1134]
          Length = 283

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKYVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|113869290|ref|YP_727779.1| methylase of polypeptide chain release factor [Ralstonia eutropha
           H16]
 gi|113528066|emb|CAJ94411.1| methylase of polypeptide chain release factor [Ralstonia eutropha
           H16]
          Length = 274

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +    L  VTGLS  Q+I      L   QR      + R L  E +  ++G R+F+ 
Sbjct: 5   PALEVRMLLTHVTGLSRTQLITRDTDTLTIAQRDAFATLLARRLAGEPMAYLIGEREFFG 64

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++ D   PRP+T    + A   SL R+ +     +LDLGTG+G + + L +E    
Sbjct: 65  RKFRVTPDVLIPRPDT----EVAAEASLARLAEVPQPTVLDLGTGSGILAVTLARERRDA 120

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +    DIS  AL +A+ NA   G ++R   L SDW++++     F +IVSNPPYI +   
Sbjct: 121 QVWATDISPGALMVAQDNASALG-ADRIHFLVSDWYAALPPGLRFHLIVSNPPYIAAGDP 179

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  ++R F+P  +L    DGLS  R I  G    L  DG   +E GY+Q     ++ E
Sbjct: 180 HLVEGDLR-FEPIDALTDHDDGLSDLRAIVSGAGARLLPDGWLLMEHGYDQAQATRQLLE 238

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   +D  G +R  
Sbjct: 239 DTGFTEIFTARDLAGLERCT 258


>gi|91974578|ref|YP_567237.1| HemK family modification methylase [Rhodopseudomonas palustris
           BisB5]
 gi|91681034|gb|ABE37336.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB5]
          Length = 292

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 107/262 (40%), Positives = 142/262 (54%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  VTGL    +IV  + +L   Q   L   + R L  E + RILG R+F+ 
Sbjct: 29  AELDARLLIGEVTGLDLTGLIVQAERLLAPDQAELLDGFVARRLAGEPVARILGAREFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LTLS+DT  PRP+TE +V+ AL +       R +  ILD+G G+GA+ LALL E P  
Sbjct: 89  LPLTLSADTLVPRPDTETVVEVALEYLRAEAPARPL--ILDIGAGSGAILLALLSECPAA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A+SNA+  G+S R      D+ S++ G FD+IVSNPPYI +  +  
Sbjct: 147 FGVATDISLGALRAAQSNAIRLGLSNRAGFAVCDYASALIGPFDLIVSNPPYIPARDIAA 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR +LDGG DGL  YR I     R L   G   VE G  Q  +V  +  + 
Sbjct: 207 LDREVRDHDPRRALDGGDDGLDAYRRIVPESMRLLRPGGALVVEFGQGQSDEVAALMRAA 266

Query: 243 KLFLVN-AFKDYGGNDRVLLFC 263
            L +     +D GG  R L+  
Sbjct: 267 GLTVSGPPRRDLGGIFRALMGR 288


>gi|322385290|ref|ZP_08058935.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
           ATCC 51100]
 gi|321270549|gb|EFX53464.1| protein-(glutamine-N5) methyltransferase [Streptococcus cristatus
           ATCC 51100]
          Length = 276

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + ++   R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNELSFTDFVLKLQAEVNQEDRDQLKAIHEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PEKSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+      +QSD   ++ G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSEDALALAAENAQSCGLD--LAFVQSDCMEAISGTFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271


>gi|85705323|ref|ZP_01036422.1| Putative methylase [Roseovarius sp. 217]
 gi|85670196|gb|EAQ25058.1| Putative methylase [Roseovarius sp. 217]
          Length = 285

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 133/258 (51%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+ + L     ++  ++ +     ++          I R +    + +ILG R F+ 
Sbjct: 22  AAGDARALLAGAVEIARDRLTLHLGDEVEPGAEARFEAMIARRMARAPVAKILGRRVFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +++D  +PRPETE L+  ALA           + +LDLGTG+G + + LL E P  
Sbjct: 82  REFEVTADVLDPRPETECLIAEALA-------GPKPLTLLDLGTGSGILAVTLLAEWPGV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GV +D+S +AL++A  NA  +GV +R     SDWF+ + G FD+IVSNPPYI    +  
Sbjct: 135 RGVALDLSAEALDVAARNAARHGVRDRLSLCHSDWFAQITGAFDLIVSNPPYIGRDEMVG 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DPR++L    DGL+ YR IA     HLN  G   VEIG+ Q   V  +  + 
Sbjct: 195 LMPEVRDHDPRMALTDEGDGLTAYRVIAGAAGAHLNPGGRLMVEIGWTQGAAVADLLRAA 254

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V    D  G DRV+
Sbjct: 255 GFEAVAVLPDLEGRDRVV 272


>gi|73542730|ref|YP_297250.1| modification methylase HemK [Ralstonia eutropha JMP134]
 gi|72120143|gb|AAZ62406.1| Modification methylase HemK [Ralstonia eutropha JMP134]
          Length = 289

 Score =  263 bits (674), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 119/262 (45%), Gaps = 8/262 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  VTGL+  Q+I      L   QR      + R L  E +  ++G R+F+  +
Sbjct: 30  LEARMLLTHVTGLTRTQLITRDGDTLTLPQRDAFATLLARRLAGEPMAYLIGEREFFGRK 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++ D   PRP+T    + A   SL R+      R+LDLGTG+G + + + +E    + 
Sbjct: 90  FRVTPDVLIPRPDT----EIAAESSLARLAGVPHPRVLDLGTGSGILAVTIARERTDAEV 145

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDC 182
              DIS  AL +A+ NA   G + R   L SDW++++     F +IVSNPPYI       
Sbjct: 146 WATDISPGALMVAQDNASALG-ANRIHFLVSDWYAALPAELHFHLIVSNPPYIAEGDPHL 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  ++R F+P  +L    DGLS    I  G    L   G   +E GY+Q      + E  
Sbjct: 205 IEGDLR-FEPIDALTDHKDGLSDLAAIVAGAHGRLLPGGWLLMEHGYDQAEATQGLLERA 263

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   +D  G  R     R
Sbjct: 264 GFTEVFTARDLAGQQRCTGGRR 285


>gi|306833420|ref|ZP_07466547.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
           700338]
 gi|304424190|gb|EFM27329.1| protein-(glutamine-N5) methyltransferase [Streptococcus bovis ATCC
           700338]
          Length = 276

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G +    I+  +  + ++ +  L   +V+   H S   I G   F ++ L++      PR
Sbjct: 33  GWTLLDFILHQNQAITEKDQMLLEQIMVQLTAHRSPQYITGKAYFRDLELSVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +      R  +R+LD+GTG+GA+ ++L    P ++    DIS  AL+
Sbjct: 93  PETEELVDLVLKEN-----SRADLRVLDIGTGSGAIAISLKAARPNWQVTASDISADALQ 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           + K NA+ N V      +QSD FS +   FD+I+SNPPYI     D +G+ V   +P ++
Sbjct: 148 LVKENALKNQVE--LTLIQSDVFSQITERFDMIISNPPYIAYDDEDEVGINVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    +G + YR I +  S HL ++G    EIGY Q   +  +         V   KD  
Sbjct: 206 LFADENGFAIYRQIIENASEHLTENGKLYFEIGYKQGEGLRALLSKHFPAKRVRVIKDMF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVM 273


>gi|299065548|emb|CBJ36719.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum CMR15]
          Length = 306

 Score =  263 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 123/262 (46%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+ 
Sbjct: 39  PALEARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFG 98

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL     RI+ RDV  +LDLGTG+G + + +       
Sbjct: 99  RMFQVTPAVLIPRPDTELLVEQALD----RIDDRDVPAVLDLGTGSGIIAVTIALARRDA 154

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +     L  DW++++        FD+IVSNPPYI S
Sbjct: 155 RVWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAS 213

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  
Sbjct: 214 TDAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 272

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +        V   +D  G+DR 
Sbjct: 273 LLADAGFADVFTAQDLAGHDRC 294


>gi|319795451|ref|YP_004157091.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Variovorax paradoxus EPS]
 gi|315597914|gb|ADU38980.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Variovorax paradoxus EPS]
          Length = 282

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 112/259 (43%), Gaps = 12/259 (4%)

Query: 4   LRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             D+   L    G        ++      + D     L   + R L  E +  +LG ++F
Sbjct: 24  RLDAQLLLLHALGRAPHDRAWLLAHDTDAMSDAAWVALAAQLSRRLTGEPVAYLLGTKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L + +    PRP+TE LVD AL      +E R+  R+LDLGTG+GA+ LAL    P
Sbjct: 84  HGLDLQVDARVLVPRPDTETLVDWALQC----LEDRNAPRVLDLGTGSGAIALALQHARP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD S  AL +A++NA   G+  RF      W       +  I SNPPYI +   
Sbjct: 140 DAQVDAVDASADALAVAEANARRLGLPVRFALAH--WLDGAADGYTAIASNPPYIAANDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                     +P  +L  G DGL   R I      HL + G   +E G++Q   V ++ E
Sbjct: 198 HLP---ALRHEPSSALVAGADGLDDIRQIVQNAPDHLAEGGWLLLEHGHDQAAAVRQLLE 254

Query: 241 SRKLFLVNAFKDYGGNDRV 259
            R    V +  D  G  R 
Sbjct: 255 YRGFAEVQSRDDLAGIQRC 273


>gi|326318377|ref|YP_004236049.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375213|gb|ADX47482.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 311

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L  + G        ++      L    +        R    E +  + G ++
Sbjct: 27  ARIDAQMLLLHLLGRPDAGRAWLLAHDGDRLSTAGQEGFQALCARRQAGEPVAYLTGRKE 86

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE LVD AL    P        R+ DLGTG+GA+ LAL    
Sbjct: 87  FYGLPLQVDARVLDPRPDTETLVDWALEVLQPL----PAPRVADLGTGSGAIALALRHGL 142

Query: 120 PFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           P  + V  VD S  AL +A++NA    +    D +++ W   + G FD +VSNPPYIE  
Sbjct: 143 PGAQVVLAVDASADALAVARANAQRLHLP--VDFVRTSWLDGISGPFDAVVSNPPYIEED 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                       +PR +L  G DGL   RTI    +  L   G   +E G+NQ   V  +
Sbjct: 201 DPHL---AALVHEPRQALASGPDGLDDIRTIVVQSASRLAPGGWLLLEHGWNQAQAVQAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
             S     V +  D  G+ R  
Sbjct: 258 LRSAGYAEVQSRADLAGHARCT 279


>gi|119383646|ref|YP_914702.1| HemK family modification methylase [Paracoccus denitrificans
           PD1222]
 gi|119373413|gb|ABL69006.1| [protein release factor]-glutamine N5-methyltransferase [Paracoccus
           denitrificans PD1222]
          Length = 275

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 98/261 (37%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L     L  H +       L          ++      + + +ILG R F+ 
Sbjct: 22  AAEDARQLLAHALELPRHHLTAALAMPLPPEALRRFDASLAARAARQPVSQILGRRAFWK 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ DT +PRPETE LV++AL              +LDLGTGTGA+ ++LL E P  
Sbjct: 82  HEFRVTRDTLDPRPETETLVEAALT--------EPFASVLDLGTGTGAILISLLAERPAA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G DIS  ALE+A+ NA   GV    D L+S+WF+SV G FD+IVSNPPYI    +  
Sbjct: 134 RGLGTDISPAALEVARENATRIGVCA--DFLESNWFASVAGQFDLIVSNPPYIALEEMAG 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+++PR +L    DGLS YR IA G   HL   G   VEIG  Q   V  +  + 
Sbjct: 192 LSPEVREWEPRAALTDEADGLSAYRAIAAGAPAHLLPGGRLMVEIGPTQGAAVAALMRAV 251

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L       D  G DRV+   
Sbjct: 252 GLAEPRILPDLDGRDRVVSAR 272


>gi|125717978|ref|YP_001035111.1| HemK protein [Streptococcus sanguinis SK36]
 gi|125497895|gb|ABN44561.1| HemK protein, putative [Streptococcus sanguinis SK36]
 gi|324991175|gb|EGC23109.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK353]
          Length = 276

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 127/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +  + R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRAEVSQKDRDQLKAIQEQLLVHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA +  +      +QSD   S++G FD+IVSNPPYI    
Sbjct: 132 PNWQITASDLSDDALALAAENAQSCEL--NLAFVQSDCLDSIQGKFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   +  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           E       +   KD  G DR++
Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271


>gi|298243250|ref|ZP_06967057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ktedonobacter racemifer DSM 44963]
 gi|297556304|gb|EFH90168.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ktedonobacter racemifer DSM 44963]
          Length = 299

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 128/266 (48%), Gaps = 4/266 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  +  +    +   P+  L   Q       I R  ++E +  ++G ++FY
Sbjct: 26  NPRLDAQVLLGHILQVPRATLYAYPERELSVEQEKRFRELIERRARNEPVAYLVGEKEFY 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                + +    PRPETELLV++AL  +  R++  ++  + D+GTG+G + + L  E P 
Sbjct: 86  GRDFQVDARVLIPRPETELLVEAALKEARRRLDAGEMPVVADVGTGSGVIPITLALEEPR 145

Query: 122 F-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D+S +ALE+A++N    GV ER   LQS    ++    D++++N PY+ +  +
Sbjct: 146 LPVIYACDVSAEALEVARTNCQRYGVEERVILLQSYLLQALPQPVDMLLANLPYVGTDEL 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRI 238
             +  +V +++P ++L  G DGL     +     ++  L   G C +E+GY  +  + R+
Sbjct: 206 PQMAPDVWNYEPHLALFSGPDGLGLLTRLCREARQYGMLRPGGWCVLEMGYLHQEPLTRL 265

Query: 239 FESR-KLFLVNAFKDYGGNDRVLLFC 263
            +S      V    DY G DR L+  
Sbjct: 266 VKSLWPKADVACISDYAGLDRHLVVR 291


>gi|194334390|ref|YP_002016250.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prosthecochloris aestuarii DSM 271]
 gi|194312208|gb|ACF46603.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prosthecochloris aestuarii DSM 271]
          Length = 297

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 6/268 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   LC V   +  Q+ +     +   +         + L+   +  + G + FY
Sbjct: 28  EARLSAELLLCHVLKANRLQLYLQHSRPVYPDELDAYRALCRKRLQGWPVQYLTGEQYFY 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETEL+V+ A+        +   + ILD+GTG+G + +    + P 
Sbjct: 88  GRVFKVDPRVLIPRPETELVVEHAIERLRGCGGEGSQLSILDIGTGSGCIAVTAALQLPG 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIE 176
            +   +D S +AL++A+ NA + GV  R   LQ+D  +       E  +D+I++NPPYI 
Sbjct: 148 ARITAIDCSAEALDVARENARSYGVETRIRFLQADMLAPEFLEDDEAAYDLIIANPPYIP 207

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               D L  EVR+ +PR++L     GL  YR +A      L + G+   E+       V 
Sbjct: 208 DSEWDDLQAEVREHEPRVALTT-ASGLECYRAVAARAPSLLCQSGILCFELHAEGAGAVS 266

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +      +   KDYGG DR+L   R
Sbjct: 267 VLMKENGFGDILLHKDYGGYDRILSAIR 294


>gi|326559213|gb|EGE09644.1| protein methyltransferase HemK [Moraxella catarrhalis 46P47B1]
 gi|326576387|gb|EGE26296.1| protein methyltransferase HemK [Moraxella catarrhalis O35E]
          Length = 295

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  V       ++ D D      +   +T  I++    + +  + G + F+     +++
Sbjct: 37  WLMHVLDKPFIFLMTDEDYQPTLEESSKITAGIMQLSAGKPLAYLTGQQSFWGRHFLVNA 96

Query: 70  DTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            T  PR +TE+LV+  L ++  +      + +++V ILDLGTGTG + + L  E  F + 
Sbjct: 97  HTLIPRADTEILVEIILNYAKAQQKIRQTDNKNLVNILDLGTGTGCIGITLALELEFAQV 156

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDIS +AL++A+ N   + ++ R   LQS W   V G FD+IVSNPPYI+      + 
Sbjct: 157 VLVDISSEALKVAEQN--NHRLNARCQLLQSHWLQKVSGQFDIIVSNPPYIKENDEHLVN 214

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                 +P  +L    DGL+  R I +    +L   GL ++E G++Q   V  ++ S   
Sbjct: 215 ---LKHEPITALVAAEDGLTDIRHIIETGRAYLKDGGLMAIEHGFDQAEAVRNLYLSSGY 271

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +DYGGNDRV L  
Sbjct: 272 LDVYTIQDYGGNDRVTLGR 290


>gi|300115231|ref|YP_003761806.1| release factor-specific protein-(glutamine-N5) methyltransferase
           [Nitrosococcus watsonii C-113]
 gi|299541168|gb|ADJ29485.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitrosococcus watsonii C-113]
          Length = 283

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 7/261 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             ++   L  +  +    +    D  L   Q       + R  + E +  I GW++F+++
Sbjct: 25  RLEAERLLAYLLKVERSYLYTWSDKRLTPTQWACFQQLLQRRARGEPLAYIRGWQEFWSL 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++  T  PRPETE LV+ AL     R++      + DLGTG+GA+ LA+  E P  +
Sbjct: 85  NLQVTEATLIPRPETEQLVELAL----QRLDLERAFNVADLGTGSGAIALAMGSERPRTR 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            +  DIS  ALE+A+SN    G+ +       DWF+ + G  F +I SNPPYI       
Sbjct: 141 VIATDISAAALEVARSNGYRLGL-DNVTFRLGDWFAPLAGERFHLIASNPPYIAEGDPH- 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +   F+P I+L     GL   R IA     +L   G   +E GY+Q   ++ +F   
Sbjct: 199 LTQDGLAFEPDIALIAKDKGLGAMRHIARAAREYLVDGGWLLLEHGYDQGPSLLALFTQL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  F D  G  RV++  
Sbjct: 259 GYQQVTDFCDLAGLPRVVIGQ 279


>gi|149006295|ref|ZP_01830007.1| serine hydroxymethyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|307127430|ref|YP_003879461.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 670-6B]
 gi|147762072|gb|EDK69034.1| serine hydroxymethyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|306484492|gb|ADM91361.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 670-6B]
          Length = 279

 Score =  263 bits (673), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|295677814|ref|YP_003606338.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1002]
 gi|295437657|gb|ADG16827.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1002]
          Length = 295

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   +  L+            R +  E + +++G R+F+ + 
Sbjct: 30  LEARILLTHVLGWRRTQLITRSEEPLERASVECYRALEARRMAGEPVAQLVGAREFFGLE 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++ALA     IE R   R+LDLGTGTGA+ +A+    P    
Sbjct: 90  FEVTPHVLIPRPETELLVETALA----AIEARPRPRVLDLGTGTGAIAVAIASMRPEAHV 145

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S  AL +A  N      ++R       L SDW+ S++    FD IVSNPPYI S 
Sbjct: 146 WALDRSADALAVAARNGARLLDAKRPGGAVTFLHSDWYGSLDTALRFDAIVSNPPYIASG 205

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+PR +L    DGLS  R I  G    L  DG+  +E GY+Q   V  +
Sbjct: 206 DPHLAEGDLR-FEPRGALTDEADGLSAIRAIIAGAPERLAADGVLWIEHGYDQAEAVRAL 264

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             +R    V + +D  G +R+
Sbjct: 265 LGARGFAEVRSERDLAGIERI 285


>gi|229076543|ref|ZP_04209503.1| Protein hemK [Bacillus cereus Rock4-18]
 gi|228706576|gb|EEL58789.1| Protein hemK [Bacillus cereus Rock4-18]
          Length = 283

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L     R+   + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERI-ERLFGNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G          D  S    ++   DV+VSNPPYI       L 
Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|312142773|ref|YP_003994219.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium sp. 'sapolanicus']
 gi|311903424|gb|ADQ13865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halanaerobium sp. 'sapolanicus']
          Length = 286

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   +  +  +    + V  D  L +++       + +  K   +  I G ++F +
Sbjct: 22  SRLDAEVLMAELLDMERINLYVKYDYPLKEKEIKNYREMVKKRAKRIPLAYITGKKEFMS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS     PRP+TE LV+  +++   R  + +  +I+D+G G+GA+ ++L       
Sbjct: 82  LEFDLSEAVLIPRPDTENLVEEVISYC--RENELEKPQIIDVGCGSGAISVSLGYYLEDA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
           + VG DIS  AL+IA+ N     + ER   +QSD             D++VSNPPYI   
Sbjct: 140 RVVGSDISKAALKIARHNLKKFELEERVSVVQSDLLREFIKRDIAEIDIVVSNPPYISEK 199

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  EV+  +PR +L+ G  GL  Y+ +     + L K+G+  +EIG  Q   V+ I
Sbjct: 200 EMAELAPEVKK-EPRTALEAGKKGLDFYKKLIPQAEKVLKKEGMLFLEIGSRQAEAVLDI 258

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F+      +   KDY  +DR++
Sbjct: 259 FDEN-WSELEIIKDYADHDRIV 279


>gi|283850913|ref|ZP_06368199.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B]
 gi|283573836|gb|EFC21810.1| modification methylase, HemK family [Desulfovibrio sp. FW1012B]
          Length = 303

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 124/260 (47%), Gaps = 6/260 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL    +I+  D  L   +       + R  + E +  +LG R+FY +   
Sbjct: 47  AQLLLAHSLGLDRLGLILAMDRPLTPDELDAFRPLVARRGRGEPVAYLLGEREFYGLDFR 106

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ DT  PRPETEL+VD ALA         +V    DLGTG+G + + L  + P   G+ 
Sbjct: 107 VTPDTLIPRPETELIVDRALAL----FPAGNVAAFADLGTGSGCLAVTLASKFPAAVGLA 162

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +D S  AL +A+ NA  +GV++R   +++D+    + +G + ++VSNPPY+         
Sbjct: 163 LDRSPNALAVARENAARHGVADRLAFVEADFAALPARDGGYGLVVSNPPYVSQAEYGECS 222

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRDF+P  +L  G  GL     +A      L   G   VEIG+ Q  +   I  +   
Sbjct: 223 REVRDFEPLAALVPGETGLEAVPVVAQAAFDALAPGGWLLVEIGWKQGGEAADILAASGF 282

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   +D  G DRV+   R
Sbjct: 283 ADVAVRRDLAGCDRVVEGRR 302


>gi|255065352|ref|ZP_05317207.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sicca ATCC 29256]
 gi|255050177|gb|EET45641.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sicca ATCC 29256]
          Length = 275

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 85/266 (31%), Positives = 118/266 (44%), Gaps = 15/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G S  Q++      L +     L     R LK E +  ILG R+FY 
Sbjct: 13  PRLEARMLLQHAGGYSRVQLVTQGADPLPEAVAAQLDILQARRLKGEPMAYILGGREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +  D   PRPETE LV++ +             ++ DLGTG+GAV + +  E    
Sbjct: 73  RWFEVGPDVLIPRPETEHLVEAVIGHL------PANGQVWDLGTGSGAVAVTVALERKDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVEGLFDVIVSNPPYIE 176
                DIS  AL IA+ NA T G   R +     WF         +  FDVIVSNPPYIE
Sbjct: 127 AVRASDISGGALAIARKNAETLGA--RVEFALGSWFETDKTSSEDKHRFDVIVSNPPYIE 184

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        ++R F+P+ +L    DGLS  R +A      L + G   +E GYNQ   V 
Sbjct: 185 AGDEHLSQGDLR-FEPQTALTDFADGLSCIRELAQRAPEFLKEGGWLLLEHGYNQGTAVR 243

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
           +I  +     V+  +D  G DR+ L 
Sbjct: 244 QILTANGFAEVSTQQDLAGLDRLTLG 269


>gi|167587637|ref|ZP_02380025.1| modification methylase, HemK family protein [Burkholderia ubonensis
           Bu]
          Length = 280

 Score =  263 bits (672), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 123/265 (46%), Gaps = 11/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + +++G R+F+    
Sbjct: 19  DARVLLAYALGWTRTQLITRGDEPLDAAAVERYLVLEARRAAGEPVAQLVGMREFFGRPF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 79  DVTPDVLIPRPETELLVEAALD----AIDGIPHPAVLDLGTGSGAIAVSIAAERPDARVW 134

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S +AL +A+ NA     + R       LQSDW+++++    FD IVSNPPYI    
Sbjct: 135 ALDRSGEALAVARRNADKLLDAHRPGGPLHWLQSDWYAALDPALAFDAIVSNPPYIAQYD 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V  + 
Sbjct: 195 PHLSQGDLR-FEPRGALTDDADGLAAIRAIVAGAGARLKPGGTLWIEHGYDQAEAVRALL 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     V +  D    +R     R
Sbjct: 254 AAHGFVSVESLADLAAIERTTGGRR 278


>gi|300690279|ref|YP_003751274.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum PSI07]
 gi|299077339|emb|CBJ49964.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum PSI07]
          Length = 295

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 122/264 (46%), Gaps = 11/264 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+    
Sbjct: 31  EARMLVSHVTGLSRVQLITQDTCSIDDGARARLAELATRRLAGEPMAYLLGEREFFGRMF 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TELLV+ AL     RI+ RD   +LDLGTG+G + + +       +  
Sbjct: 91  RVTPAVLIPRPDTELLVEQALD----RIDDRDAPDVLDLGTGSGIIAVTIALARRDARVW 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180
             D S  AL +A  NA   G +        DW++++       +FD+I SNPPYI S   
Sbjct: 147 ATDTSADALTVAVRNAQALGAA-NVHVALGDWYAALPENDAPPVFDLIASNPPYIASTDT 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  +  
Sbjct: 206 HLDQGDLR-FEPAGALTDHGDGLRHLRTIVTGAPARLAADGWLLLEHGYDQGPAVRALLA 264

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V   +D  G+DR     R
Sbjct: 265 EAGFADVFTAQDLAGHDRCSGGRR 288


>gi|76786890|ref|YP_329783.1| HemK family modification methylase [Streptococcus agalactiae A909]
 gi|77408686|ref|ZP_00785419.1| modification methylase, HemK family [Streptococcus agalactiae COH1]
 gi|76561947|gb|ABA44531.1| modification methylase, HemK family [Streptococcus agalactiae A909]
 gi|77172734|gb|EAO75870.1| modification methylase, HemK family [Streptococcus agalactiae COH1]
          Length = 276

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +   
Sbjct: 28  LKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LVD  L+ +     K +   +LD+GTG+GA+ ++L KE P +  +  DIS
Sbjct: 88  VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL++AK NA  N        ++SD FS++   FD+IVSNPPYI     D +G  V   
Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLAS 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249
           +P  +L    +GL+ YR I +    +L   G    EIGY Q  D+  + +          
Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260

Query: 250 FKDYGGNDRVLLF 262
            KD  G DR+++ 
Sbjct: 261 LKDIFGKDRMVVL 273


>gi|229033961|ref|ZP_04188915.1| Protein hemK [Bacillus cereus AH1271]
 gi|228728387|gb|EEL79409.1| Protein hemK [Bacillus cereus AH1271]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|229118824|ref|ZP_04248173.1| Protein hemK [Bacillus cereus Rock1-3]
 gi|228664625|gb|EEL20118.1| Protein hemK [Bacillus cereus Rock1-3]
          Length = 283

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G          D  S    ++   DV+VSNPPYI       L 
Sbjct: 144 DIARESIEVAKENAKSLGAE--VTFYHGDLLSPFYKIDQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|194290878|ref|YP_002006785.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Cupriavidus taiwanensis LMG 19424]
 gi|193224713|emb|CAQ70724.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Cupriavidus taiwanensis LMG 19424]
          Length = 298

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  VTGLS  Q+I     VL   QR  L   + R L  E +  ++G R+F+ 
Sbjct: 29  PALEARMLLTHVTGLSRTQLITRDTDVLTIAQRDALATLLARRLAGEPMAYLIGEREFFG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++ D   PRP+T    + A   +L R+       +LDLGTG+G + + L +E    
Sbjct: 89  RKFRVTPDVLIPRPDT----EVAAEAALARLAPVPHPNVLDLGTGSGILAVTLARERRDA 144

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +    DIS  AL +A+ NA   G +E  + L SDW+S++     F +IVSNPPYI +   
Sbjct: 145 RVWATDISPGALMVAQDNARALG-AEHIEFLVSDWYSALPPDLRFHLIVSNPPYIAAGDP 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+P  +L    DGLS  R I  G    L   G   +E GY+Q     ++ E
Sbjct: 204 HLAEGDLR-FEPIDALTDHDDGLSDLRAIVSGAGMRLLPGGWLLMEHGYDQAAATRQLLE 262

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V   +D  G +R  
Sbjct: 263 ASGFADVFTARDLAGLERCT 282


>gi|225856676|ref|YP_002738187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae P1031]
 gi|225724378|gb|ACO20230.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae P1031]
          Length = 279

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|15838113|ref|NP_298801.1| protoporphyrinogen oxidase [Xylella fastidiosa 9a5c]
 gi|18203344|sp|Q9PD67|HEMK_XYLFA RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.XfaHemK2P
 gi|9106546|gb|AAF84321.1|AE003981_3 protoporphyrinogen oxidase [Xylella fastidiosa 9a5c]
          Length = 275

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L          +    D  L           + +  +   +  ++G R F+ + +
Sbjct: 19  DAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 79  MVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL+IA  NA  +G++      + DW+ ++ G  FD+IVSNPPYI         
Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGDWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L  G DGL   R +  G   +L   G   +E G++Q   +  +  +  L
Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILTAGAPAYLRPGGWLVMEHGWDQGAAMRTLLHTAGL 252

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV +  
Sbjct: 253 VAVATVQDLEARDRVTVGR 271


>gi|170728013|ref|YP_001762039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella woodyi ATCC 51908]
 gi|169813360|gb|ACA87944.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella woodyi ATCC 51908]
          Length = 280

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +       +   PD  L   Q    T  + R +    I  I+G R+F++
Sbjct: 23  PKLDAEVMLLHIIHKQRGYLYTWPDERLTSEQIDDYTKMVGRRVIGTPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E P +
Sbjct: 83  LPFMVNPTTLIPRPDTEILVETAL-----NLPLAEAAKVLDLGTGTGAIALSLAYEKPSW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N     +  + D +QSDWF SV    F++IVSNPPYI+     
Sbjct: 138 QITAVDKIIEAVALAKANRSHLKLP-QVDIIQSDWFDSVNCYDFNLIVSNPPYIDEEDSH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     G +    IAD    +L   G   +E G+ Q + +      
Sbjct: 197 LEEGDVR-FEPHSALTAPEHGFADLYHIADCARDYLAPGGYLLLEHGFGQALQLRDKMIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277


>gi|294787799|ref|ZP_06753043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Simonsiella muelleri ATCC 29453]
 gi|294484092|gb|EFG31775.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Simonsiella muelleri ATCC 29453]
          Length = 276

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 124/267 (46%), Gaps = 15/267 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +S   L  +TG +  Q+I     +L ++Q   L     R  + E +  +LG R+FY 
Sbjct: 15  PRNESRMLLQHITGYTRAQLITHDQEILTEQQINQLNTLAKRREQGEPMAYLLGTREFYG 74

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T+S     PRPETE L+++AL      +   +   + DLGTG+G + ++   E    
Sbjct: 75  REFTVSPAVLIPRPETEHLLEAAL------LRLPENGVLWDLGTGSGILGISTKLERKDS 128

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIE 176
                D+S  AL++A+ NA   G        Q  WF +       E   DV+VSNPPYI+
Sbjct: 129 LVFASDLSADALQVAQQNAQHLGAD--VAFAQGSWFDAARVFRLPENSVDVLVSNPPYIK 186

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +     ++R F+P+ +L    DGL+H R +      +L  +G   +E GYNQ V + 
Sbjct: 187 NNDLHLNQGDLR-FEPQTALTDFSDGLAHIRILIKNGKIYLKPNGWLLLEHGYNQAVAIR 245

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++F      ++    D  G DR+    
Sbjct: 246 QLFTQHGYQMIETQPDLAGLDRITFGQ 272


>gi|148653569|ref|YP_001280662.1| HemK family modification methylase [Psychrobacter sp. PRwf-1]
 gi|148572653|gb|ABQ94712.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1]
          Length = 314

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 38/289 (13%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V    +  +I D +  L D ++    + I +      +  + G + F+++   
Sbjct: 26  ADWLL-YVLQKPASFLITDAEYKLTDAEQAHFESGIEQMRSGTPLAYLTGKQAFWSLDFF 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIE----------------KRDVVRILDLGTGTGA 110
           ++  T  PRP+TE+LV+  LA+                       +   R+LDLGTG+G 
Sbjct: 85  VNEHTLIPRPDTEVLVEQVLAWIDTHYAQVQNDDADDINDFNDANKLPKRLLDLGTGSGC 144

Query: 111 VCLALLKES---------PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           + ++L  E            ++   +D S  ALE+A+ NA  N V+   + +QSDWFS++
Sbjct: 145 IAISLAHELQMLAPNHTASQWQVTAIDYSNPALEVARRNAALNKVT-NIEFIQSDWFSAL 203

Query: 162 EG--------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           E          FD+IVSNPPYI          +    +P  +L    +GL   + IA   
Sbjct: 204 EAANTNKESPRFDIIVSNPPYIVDDDEHL---DKLKAEPLSALVAPDNGLGDIKQIAGQA 260

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             +L   GL +VE GY+Q   V +IF       V   +DYGGNDRV + 
Sbjct: 261 RGYLVSGGLLAVEHGYDQGAAVRQIFTDFGYTQVKTVQDYGGNDRVTMG 309


>gi|241667854|ref|ZP_04755432.1| HemK family modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876396|ref|ZP_05249106.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842417|gb|EET20831.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 285

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V  +    + ++ D  LD+     +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLSVDKTYLYLNSDKQLDNAILTKINGKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE++V + L       +K   ++ILDLG G+GA+ LAL  E P  +
Sbjct: 85  KLYVTKDTLIPRADTEVIVAAVLDDIQ---DKNAQLKILDLGAGSGAIALALADELPRSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            V VD+  K L++AK NA+ N +    + +QS W+ +++G  FD+IVSNPPYI+ V    
Sbjct: 142 VVAVDLYSKTLDVAKKNALANKI-VNVEFMQSSWYENLDGTKFDIIVSNPPYID-VDDAN 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   VR+ +P  +L    +GL+  R I       L + G   +E G+ Q  D+  IF   
Sbjct: 200 IDDSVREHEPSRALFAADNGLADIRIIISQAGGFLKQGGYLYIEHGFTQANDIANIFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               +   KD    DR     
Sbjct: 260 SFGDIQTIKDLNYKDRCTKAR 280


>gi|238927405|ref|ZP_04659165.1| polypeptide chain release factor methyltransferase HemK
           [Selenomonas flueggei ATCC 43531]
 gi|238884687|gb|EEQ48325.1| polypeptide chain release factor methyltransferase HemK
           [Selenomonas flueggei ATCC 43531]
          Length = 292

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 5/264 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L          + V  D  L+  +       +    +H  I  ILG R+F  
Sbjct: 27  PRLDAEVLLAEALHRDRMYLYVHFDEPLEPAELAAFRGYVKERGRHVPIAYILGRREFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
           +   ++ DT  PRP+TE+L   A+     R     + +R  D+GTGTGA+ L++L  +  
Sbjct: 87  LPFRVTRDTLIPRPDTEILAQFAVDTLRARASAGMEELRFADIGTGTGAIALSVLNYTEG 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   VDIS +A  +   NA+  G+  R + L  D    + G  +D+I+SNPPYI +  V
Sbjct: 147 TRADAVDISPEAAAVTAENAMALGLMSRIEILIGDLAVPLLGRSYDMILSNPPYIPTAEV 206

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EVR  +P ++LDGG DGLS YR +       L + G+ +VE+G ++  DV  +  
Sbjct: 207 DTLMEEVRSHEPHLALDGGADGLSVYRQLMADAPDLLKEGGIIAVEVGIHEAADVASLMA 266

Query: 241 SRKLFLVNA--FKDYGGNDRVLLF 262
           +    +V     +D  G +RV++ 
Sbjct: 267 AHP-RIVRTAMRRDLAGIERVVIG 289


>gi|322387785|ref|ZP_08061394.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis
           ATCC 700779]
 gi|321141652|gb|EFX37148.1| protein-(glutamine-N5) methyltransferase [Streptococcus infantis
           ATCC 700779]
          Length = 278

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/248 (32%), Positives = 126/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +        + ++ F+     +   H     I+G  +F+ ++L +      PR
Sbjct: 33  NLSFTDFVFTLQQEATEEEKQFVEEIYKKLAAHIPAQYIIGHAEFFGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            ETE LV+  LA +L     +D +++LD+GTG+GA+ LAL K  P +     DIS +AL+
Sbjct: 93  LETEELVELILAENL-----KDNLKVLDIGTGSGAIALALAKNRPDWSVTAADISQEALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           ++  NA  N  +     ++SD FS +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LSLENA--NAQNLNLSFIKSDCFSEISAKYDIIVSNPPYISRADEVEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYG 254
           L    DGL+ YR IA+    +LN  G   +EIGY Q   V  +F E+     V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDSKDYLNDGGKIYLEIGYKQGQSVPALFMENFPEKRVRTLKDQF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GQDRMVVI 273


>gi|289167969|ref|YP_003446238.1| protoporphyrinogen oxidase [Streptococcus mitis B6]
 gi|288907536|emb|CBJ22373.1| protoporphyrinogen oxidase [Streptococcus mitis B6]
          Length = 278

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 77/247 (31%), Positives = 117/247 (47%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      +   +  F+     +   H+    I+G  DFY ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTKEEEVFVKGIFQQLAAHKPAQYIIGQTDFYGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +       + +++LD+GTG+GA+ L L K    +     DIS +AL+
Sbjct: 93  PETEELVELILAEN-----SEESLKVLDIGTGSGAIALVLAKNRAAWSVTAADISQEALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA            +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENAK--NQKFNIFFKKSDCFAEIFEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|259418842|ref|ZP_05742759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter sp. TrichCH4B]
 gi|259345064|gb|EEW56918.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Silicibacter sp. TrichCH4B]
          Length = 278

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G RDFY
Sbjct: 23  DPARDARVLLAHAARIEAARVTLIAPEELSHEVAERYDQLISLRAIRVPVSHLIGERDFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S+D  +PRPETE L+++AL+            R+LDLG G+G + + LL E   
Sbjct: 83  GRRFKVSADVLDPRPETETLIEAALS--------EPFERVLDLGVGSGCILVTLLAEQQG 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  A   A +NAV + V  R D  QSDWFS+V+G FD+IVSNPPYI    +D
Sbjct: 135 ALGLGVDLSEAACLQACANAVLHRVEARADIRQSDWFSAVKGQFDLIVSNPPYIALNEMD 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR+ +P+++L  G DGLS YR I  G+  HL + G   VEIG  Q   V  +  +
Sbjct: 195 DLSEEVREHEPQMALTDGADGLSAYRLICAGLGCHLAQGGRVLVEIGPTQGAAVAEMMRA 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V    D  G DRV+L  
Sbjct: 255 AGLVEVTVLPDLDGRDRVVLGR 276


>gi|307296978|ref|ZP_07576794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobium chlorophenolicum L-1]
 gi|306877504|gb|EFN08732.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobium chlorophenolicum L-1]
          Length = 289

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 89/261 (34%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L     +  + +++      D          + R L  E I  I G RDF+ 
Sbjct: 35  PRLDAELLLAHALRIDRNDLLLRQR---DLSIPPDFDALLQRRLTGEPIAYITGTRDFWT 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRP++E L+++AL         R   RILDLGTG+GA+ LA L + P  
Sbjct: 92  ISLHVTPDVLIPRPDSETLIEAALD----HFGARSPARILDLGTGSGALLLAALSQWPQA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G GVDIS  AL +A+ NA   G  ER      +W   +EG FD+I+ NPPYI   +   
Sbjct: 148 RGTGVDISPAALAVAQDNADRLGFGERAAFRLGNWAEGIEGPFDLILINPPYIARDV--A 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V   +P  +L  G DGL  YR IA  + R L  DG+ ++EIGY+Q++ V  +   +
Sbjct: 206 LAGDVL-HEPESALFAGADGLDDYRRIAPTLPRLLAPDGMAAIEIGYDQRLSVSALLADQ 264

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L  V + +D  G++R L+  
Sbjct: 265 GLS-VASRRDLAGHERCLMAT 284


>gi|300313562|ref|YP_003777654.1| polypeptide chain release factors methylase [Herbaspirillum
           seropedicae SmR1]
 gi|300076347|gb|ADJ65746.1| polypeptide chain release factors methylase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 277

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 87/257 (33%), Positives = 130/257 (50%), Gaps = 11/257 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   LC    L+  Q+I   +  L   +   L   + R L+ E I  I+G R+FY + 
Sbjct: 24  LENRILLCHALRLTRVQLITQSERQLSAAEAETLAALLARRLRGEPIAYIVGQREFYGLD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +S D   PRP+TELLV+ AL               LD+GTG+GA+ +A+    P  + 
Sbjct: 84  LRVSPDVLIPRPDTELLVELALERL------PQGGSALDMGTGSGAIAVAIAHTRPDAQV 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
             +D S  AL IA+ NA T+    R   L+SDW+ ++  +  FD+IVSNPPYI +  +  
Sbjct: 138 TALDASPAALAIARENASTH--QVRVRLLESDWYGALDADQAFDLIVSNPPYIVAGDIHL 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++R F+P  +L    DGLS  RTI +G   HL   G   +E GY+Q   V  +    
Sbjct: 196 SQGDLR-FEPVDALTDHADGLSDLRTIIEGAPAHLKAGGWLLMEHGYDQAAAVRALLTGG 254

Query: 243 KLFLVNAFKDYGGNDRV 259
               V +++D  G +RV
Sbjct: 255 GWREVQSWRDLAGIERV 271


>gi|194398713|ref|YP_002037656.1| methyltransferase, HemK family protein [Streptococcus pneumoniae
           G54]
 gi|194358380|gb|ACF56828.1| methyltransferase, HemK family protein [Streptococcus pneumoniae
           G54]
          Length = 279

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA  +  +      +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENA--SDQNFNIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|257064122|ref|YP_003143794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Slackia heliotrinireducens DSM 20476]
 gi|256791775|gb|ACV22445.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Slackia heliotrinireducens DSM 20476]
          Length = 314

 Score =  262 bits (671), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 27/283 (9%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +   TGLS  ++  + +  L   +R  L +A+ R    E +  I G   F  + + 
Sbjct: 30  AQWLMSHATGLSRVEIYTNYERPLSTEERDVLRDALRRRGSGEPLQYIQGSAPFRFIEVK 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIE-------------------------KRDVVRI 101
           +      PRPETE+LVD A+      +                          K     +
Sbjct: 90  VRPGVLIPRPETEVLVDEAMRELKSIMPDAFTHRTARDSMSVDGEEPVPAEAFKIPTFNV 149

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D  TG+G +  A+  E    + V  D+S  A+E+A+ NA   G+ +R +    D  +  
Sbjct: 150 VDACTGSGCIACAIASEHANAQVVATDVSETAVELARENAADLGLGDRIEVRLCDLLADA 209

Query: 162 EGLF-DVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           E  + D+IVSNPPY+ + +VD  +  EV DF+PR++LDGG DGL  YR +     R L  
Sbjct: 210 EDSWADLIVSNPPYVPTAVVDSEIPAEVADFEPRLALDGGEDGLDIYRRLLADGKRVLKA 269

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           DG+ + E+      +  R+ E      V   KD  G  R+++ 
Sbjct: 270 DGILACELHETCLEEAARLAEEAHYTQVRIAKDLAGRPRIIVA 312


>gi|228988554|ref|ZP_04148641.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228771171|gb|EEM19650.1| Protein hemK [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETSQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|289423625|ref|ZP_06425425.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus anaerobius 653-L]
 gi|289155993|gb|EFD04658.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus anaerobius 653-L]
          Length = 302

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 132/266 (49%), Gaps = 8/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    LC+V      ++++  D  +   +       + +    + I  I+  ++F  
Sbjct: 29  PRLDVDLMLCKVMDFDRMKLMMSYDKPMHPEEIKEFERMLEQRSMRKPIAYIINEKEFMG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   ++ +   PRP+TE++V+  L      P+  +   ++I+D+  G+GA+ L++ K S 
Sbjct: 89  LNFYVNENVLIPRPDTEIIVEEVLDIIDRAPKEGENGPIKIMDMCLGSGAIALSIAKLSS 148

Query: 121 -FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPY 174
              +  GVDIS +A+++A+ N    G+    D ++SD FSS +        D++VSNPPY
Sbjct: 149 VDLQICGVDISKEAIDVARVNRRRLGLGACVDFVESDLFSSSDLEVYLDSLDILVSNPPY 208

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           IE  +++ L  +V+D++P ++L GG DG+  Y++I     + L   G    E G++Q   
Sbjct: 209 IEDHVIEGLEPDVKDYEPILALAGGDDGMDFYKSIIKSSPKFLKIGGWLVFESGHDQAEK 268

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           +    E      +   KD  G +R++
Sbjct: 269 IKNEMEKVGFDCLYFKKDLQGYNRMV 294


>gi|152977514|ref|YP_001377031.1| HemK family modification methylase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026266|gb|ABS24036.1| modification methylase, HemK family [Bacillus cytotoxicus NVH
           391-98]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    + + Q       I + +    +  ++G+  FY     +
Sbjct: 25  EIVLCHVLNTNRTGLMMNMREEISNEQEKRFKELIHKHIDGMPVQYLMGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIQRNFGNQE-LHVADIGTGSGAISITLALENQNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA + G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKQNATSLGA--NVTFYHGDLLSPFYETGKKLDVVVSNPPYIPEEDWKGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + + R L K  L + E+G  Q  DV  + E    
Sbjct: 202 SVVKEHEPKRALVGGADGLDFYRRFMEELPRVLQKKALVAFEVGVGQGEDVKGLLEDTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|221195021|ref|ZP_03568077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium rimae ATCC 49626]
 gi|221184924|gb|EEE17315.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium rimae ATCC 49626]
          Length = 304

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 12/270 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + D  L   +   +  A+ +      +  + G   F ++ L 
Sbjct: 31  AEWLLSATTGLSRVELYTNFDKPLMQDELNRMHQAVEQRASGRPLQYVTGEMPFRHIVLK 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEK------RDVVRILDLGTGTGAVCLALLKESP 120
                  PRPETE+LVD AL     +          + +R+L++G GTG + L++  E P
Sbjct: 91  CEPGVLIPRPETEVLVDIALEGIDQKCAAGEKDGTPEPLRVLEVGVGTGCIALSIASERP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE 176
               V  D+S +A+ +A+ N    G+S+R   ++ D  S V       F V+VSNPPYI 
Sbjct: 151 DTDVVATDVSPEAISLAQRNCDALGLSDRVHLIECDLVSGVPKEDVERFCVLVSNPPYIP 210

Query: 177 SVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           + I    +  EV++F+P+++LDGG DGL  YR +       L   G+  +E+        
Sbjct: 211 TEILKKSVPAEVKEFEPKLALDGGNDGLDVYRRLLQEAPHMLAPGGMLCIELYEGHLDRA 270

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +         ++  +D     R+L+  R
Sbjct: 271 AELARQAGVWRDISIKEDLTHRPRILVAYR 300


>gi|28198634|ref|NP_778948.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1]
 gi|182681318|ref|YP_001829478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa M23]
 gi|32129592|sp|Q87DF7|HEMK_XYLFT RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.XfaHemK2P
 gi|28056718|gb|AAO28597.1| protoporphyrinogen oxidase [Xylella fastidiosa Temecula1]
 gi|182631428|gb|ACB92204.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa M23]
 gi|307579768|gb|ADN63737.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 275

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L          +    D  L           + +  +   +  ++G R F+ + +
Sbjct: 19  DAEALLLHALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 79  IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL+IA  NA  +G++      + +W+ ++ G  FD+IVSNPPYI         
Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q   V  +  +  L
Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAVRTLLHTAGL 252

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV +  
Sbjct: 253 VAVATMQDLEARDRVTVGR 271


>gi|163858861|ref|YP_001633159.1| heme biosynthesis protein [Bordetella petrii DSM 12804]
 gi|163262589|emb|CAP44892.1| heme biosynthesis protein [Bordetella petrii]
          Length = 275

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V       ++      ++  Q         R L  E +  ++G R+F  
Sbjct: 19  PRLEARMLLEHVLQKPRAWMLAHDTDPIEAWQAQQYQALATRRLAGEPMAYLVGHREFMG 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRPETELLV++ALA+    +  R    +LDLGTG+G + +++   +P  
Sbjct: 79  HDFAVTPDVLIPRPETELLVETALAW----LADRPEAAVLDLGTGSGVIAVSIALGAPRA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
                D S  AL++A  NA   G   R D  Q  W+ ++     +D+IVSNPPYI     
Sbjct: 135 AVTATDASAAALQVAVRNAARLGA--RVDFAQGSWYDALPARARYDLIVSNPPYIARDDQ 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L  G DGL     I  G +  L   G   VE G++Q   V ++  
Sbjct: 193 HLDQGDLR-FEPRNALTDGADGLRDLAVIVAGAAARLRPGGALWVEHGWDQAAAVRQLLA 251

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +     + + +D  G +R+
Sbjct: 252 AAGFDQITSRRDLSGIERI 270


>gi|296327944|ref|ZP_06870479.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
 gi|296154900|gb|EFG95682.1| polypeptide chain release factor methyltransferase HemK
           [Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
          Length = 383

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 138/266 (51%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60
             L D+      V  ++ + +       + +  +  +    ++R+ K + +  ILG  +F
Sbjct: 103 NPLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKNKIREMLVLRAKKRKPLQYILGEWEF 162

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   +S     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E  
Sbjct: 163 YGLPFKMSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAVANELK 218

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                G+DI+ KA+++A  N + N + E  + ++S+ F  ++    +D+IVSNPPYI   
Sbjct: 219 SSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKLDKDFKYDLIVSNPPYISKE 277

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             + L  EV++++P+ +L    DGL  Y+ I+     +L   G  + EIGYNQ  DV +I
Sbjct: 278 EYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKDTGYLAFEIGYNQAKDVSKI 337

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     +++  KDYGGNDRV++  +
Sbjct: 338 LQDNNFAILSIVKDYGGNDRVIIAKK 363



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 17/45 (37%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  +   + + ++
Sbjct: 22 PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 66


>gi|169833726|ref|YP_001694465.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Hungary19A-6]
 gi|168996228|gb|ACA36840.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Hungary19A-6]
          Length = 279

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 78/249 (31%), Positives = 119/249 (47%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLLF 262
            G +R+++ 
Sbjct: 266 FGQNRMVVI 274


>gi|118480363|ref|YP_897514.1| HemK family modification methylase [Bacillus thuringiensis str. Al
           Hakam]
 gi|118419588|gb|ABK88007.1| modification methylase, HemK family [Bacillus thuringiensis str. Al
           Hakam]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKMNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|227486770|ref|ZP_03917086.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus lactolyticus ATCC 51172]
 gi|227235240|gb|EEI85255.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus lactolyticus ATCC 51172]
          Length = 264

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 8/254 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  + G S   ++++ +  L+  Q   L + I +      +   +G  +FY++RL +   
Sbjct: 18  LTYILGKSKSYILMNQNLELNSEQNQRLNDIINKRKVSYPLQYAIGQWEFYDLRLKVDER 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD  +             +ILD+GTGTGA+ LAL K       +G DI 
Sbjct: 78  ALIPRFETEIIVDYLIK------SPMKKEKILDIGTGTGAIALALAKNIENSFVIGSDIE 131

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +AL +A+ N V  G ++  D ++SD F  + G +D+I+SNPPYI+    + L  E+  F
Sbjct: 132 DRALSLARENKVFTG-TKNVDFIKSDLFKDISGAYDLIISNPPYIDKKDYESLEKELY-F 189

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L GG DGL  YR I      +L + G    EIGYNQK  + ++  ++    +   
Sbjct: 190 EPKSALYGGEDGLDFYREIIKNAGAYLCEGGHLVFEIGYNQKDILNKLLVNQGFVNIENI 249

Query: 251 KDYGGNDRVLLFCR 264
           KD+   DR ++  +
Sbjct: 250 KDFNDFDRFIIAQK 263


>gi|17547622|ref|NP_521024.1| methyltransferase [Ralstonia solanacearum GMI1000]
 gi|17429926|emb|CAD16610.1| probable methylase of polypeptide chain release factors protein
           [Ralstonia solanacearum GMI1000]
          Length = 306

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 122/262 (46%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +DD  R  L     R L  E +  +LG R+F+ 
Sbjct: 39  PALEARMLVSHVTGLSRVQLITQDTCGIDDGTRTRLAELATRRLAGEPMAYLLGEREFFG 98

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL     RI+ RD   +LDLGTG+G + + +       
Sbjct: 99  RMFQVTPAVLIPRPDTELLVEQALD----RIDDRDAPAVLDLGTGSGIIAVTIALARRDA 154

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +     L  DW++++        FD+IVSNPPYI S
Sbjct: 155 RVWATDTSADALAVAVRNAQALGAANMHAAL-GDWYAALPESDAPPVFDLIVSNPPYIAS 213

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  
Sbjct: 214 TDAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 272

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +        V   +D  G+DR 
Sbjct: 273 LLADAGFADVFTAQDLTGHDRC 294


>gi|121603685|ref|YP_981014.1| HemK family modification methylase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592654|gb|ABM36093.1| [protein release factor]-glutamine N5-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 283

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 4   LRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             D+   L    G        ++      L            +R    E +  I+G ++F
Sbjct: 20  RLDAQLLLLHALGKPASARSWLLAHDTDALAQEVAEAFRALSLRRASGEPLAYIVGGKEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L + +    PRP+TE LV+ +LA  L        +++LDLGTG+GA+ LA+     
Sbjct: 80  FGLALQVDARVLVPRPDTETLVEWSLA-VLKAPGLMPPLKVLDLGTGSGAIALAIAHSLK 138

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 +   VD S  AL++A+ NA   G++     ++S W   V G F +I SNPPYI 
Sbjct: 139 ATGREAQVTAVDASADALDVARENARRLGLA--VAFIESSWLQGVNGRFHLIASNPPYIA 196

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S             +P  +L  G+DGL   R I      HL   G   +E GY+Q   V 
Sbjct: 197 SADPHL---AALAHEPLQALTAGMDGLDDIRDIIQQAPDHLLPGGWLLLEHGYDQAGRVR 253

Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259
            +   R    V   +D  G +R 
Sbjct: 254 ELLVQRGFLQVQGRQDLAGIERC 276


>gi|19704666|ref|NP_604228.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714974|gb|AAL95527.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 354

 Score =  262 bits (670), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 138/266 (51%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDF 60
             L D+      V  ++ + +       + +  +  +    ++R+ K + +  ILG  +F
Sbjct: 74  NPLLDTEYIFSDVLKVNKNTLKYSMSREIKEEDKNKIREMLVLRAKKRKPLQYILGEWEF 133

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   +S     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E  
Sbjct: 134 YGLPFKMSEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAVANELK 189

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                G+DI+ KA+++A  N + N + E  + ++S+ F  ++    +D+IVSNPPYI   
Sbjct: 190 SSSVTGIDINEKAIKLAIENKILNKI-ENVNFIESNLFGKLDKDFKYDLIVSNPPYISKD 248

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             + L  EV++++P+ +L    DGL  Y+ I+     +L   G  + EIGYNQ  DV +I
Sbjct: 249 EYETLMPEVKNYEPQNALTDLGDGLHFYKEISKLAGEYLKDTGYLAFEIGYNQAKDVSKI 308

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     +++  KDYGGNDRV++  +
Sbjct: 309 LQDNNFAILSIVKDYGGNDRVIIAKK 334


>gi|324329277|gb|ADY24537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 283

 Score =  262 bits (670), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKIHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|239817176|ref|YP_002946086.1| modification methylase, HemK family [Variovorax paradoxus S110]
 gi|239803753|gb|ACS20820.1| modification methylase, HemK family [Variovorax paradoxus S110]
          Length = 283

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 116/259 (44%), Gaps = 12/259 (4%)

Query: 4   LRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             D+   L    G        ++      L D     L+  + R L  E +  +LG ++F
Sbjct: 25  RLDAQLLLLHALGRAPHDRAWLLAHDTDTLSDAAWSALSAQLPRRLAGEPVAYLLGEKEF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L + +    PRP+TE LVD AL      +E RD  R+LDLGTG+GA+ LAL    P
Sbjct: 85  HGLGLQVDARVLVPRPDTETLVDWALQC----LEGRDAPRVLDLGTGSGAIALALQHARP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VD S  AL +A++NA   G+  RF   Q+ W     G + VI SNPPYI +   
Sbjct: 141 DALVDAVDASADALAVAEANAQRLGLPVRFR--QAHWLDGAAGGYAVIASNPPYIAAGDP 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                     +P  +L  G DGL+  R I      HL   G   +E G++Q   V ++  
Sbjct: 199 HL---AALQHEPLAALVAGPDGLADIRQIVQQAPAHLADGGWLLLEHGHDQAAAVRQLLG 255

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +R    V +  D  G  R 
Sbjct: 256 ARGFAEVQSRDDLAGIQRC 274


>gi|120600165|ref|YP_964739.1| HemK family modification methylase [Shewanella sp. W3-18-1]
 gi|146291907|ref|YP_001182331.1| HemK family modification methylase [Shewanella putrefaciens CN-32]
 gi|120560258|gb|ABM26185.1| modification methylase, HemK family [Shewanella sp. W3-18-1]
 gi|145563597|gb|ABP74532.1| modification methylase, HemK family [Shewanella putrefaciens CN-32]
 gi|319425198|gb|ADV53272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Shewanella putrefaciens 200]
          Length = 282

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+  FL      +   +   P+  L   Q       +++  K   +  I+G R+F++
Sbjct: 25  AHLDAEVFLLYCLNKNRAYLYTWPEKALTIDQWKRFQQMVLKRQKGVPVAHIVGEREFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL   L         ++LDLGTGTGA+ LAL  E   +
Sbjct: 85  LPFIVNDTTLIPRPDTEILVETALNLPLSTY-----AKVLDLGTGTGAIALALASERESW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD    A+ +A +N     +  + + LQSDWFS+V+   FD+IVSNPPYI+     
Sbjct: 140 EITAVDKVDDAVALAIANRENLKLP-QVEILQSDWFSAVKSRDFDLIVSNPPYIDEADEH 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L    +G +    IA     +L  +G   +E G+ Q V +      
Sbjct: 199 LHQGDVR-FEPQSALTAAEEGFADLYYIAKTARDYLKPNGYILLEHGFEQAVKLRGKLIE 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V   +D+G NDR  + 
Sbjct: 258 LGYENVATVRDFGSNDRCTMG 278


>gi|332878223|ref|ZP_08445951.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683835|gb|EGJ56704.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 281

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 124/256 (48%), Gaps = 8/256 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L      S    +      L ++    +  AI     H+ I  ILG   F++ R  + 
Sbjct: 29  MLLEHYAKCSKATALACAKESLPEKVVTPIKEAIRELQNHKPIQYILGETVFFSYRFLVD 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE LVD  L    P  +    ++I+D+GTG+G + ++L K  P  +   VD
Sbjct: 89  ENVLIPRPETEELVDWVLTTVTPTSK---PLKIIDIGTGSGCIAISLAKSLPNAEVTAVD 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S KAL++A+ NA  NGV+  F  LQ D    S++   +D+I+SNPPY+ S+    +   
Sbjct: 146 VSAKALQVARRNAELNGVTINF--LQQDILQTSTLPDTYDIIISNPPYVRSLEKAEMQAN 203

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L     D L  Y  IA    + L+  G    EI      + + + +++   
Sbjct: 204 VLEYEPHLALFVSDTDPLLFYDRIATLARKALSPQGSLFFEINQYLGDETIALLKAKGFE 263

Query: 246 LVNAFKDYGGNDRVLL 261
            V   +D  GNDR+++
Sbjct: 264 KVVLRQDLSGNDRMIM 279


>gi|229082543|ref|ZP_04215006.1| Protein hemK [Bacillus cereus Rock4-2]
 gi|228700975|gb|EEL53498.1| Protein hemK [Bacillus cereus Rock4-2]
          Length = 283

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V  ++   ++++    + + Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKVNRTGLLMNMREEITEDQEKSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENENLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFHKTGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGGDVKRLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|237744128|ref|ZP_04574609.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|229431357|gb|EEO41569.1| methyltransferase [Fusobacterium sp. 7_1]
          Length = 370

 Score =  261 bits (669), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 136/265 (51%), Gaps = 8/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFY 61
            L D+      V  ++ + +       +    +  +    ++R+ K + +  ILG  +FY
Sbjct: 91  PLLDTEYIFSDVLKVNKNTLKYSMSREIKKEDKDKIREMLVLRAKKRKPLQYILGEWEFY 150

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV+  +       E      ILD+G+G+GA+ +A+  E   
Sbjct: 151 GLPFKVNEGVLIPRADTEILVEQCIQLMREVEEPN----ILDIGSGSGAISIAIANELKS 206

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
               G+DI+ KA+E+A  N   N + E  + ++S+ F  ++    +D+IVSNPPYI    
Sbjct: 207 SSVTGIDINEKAIELAIENKTLNKI-ENVNFIESNLFEKLDKDFKYDLIVSNPPYISKEE 265

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  EV++++P+ +L    DGL  YR I+     +L   G  + EIGYNQ  DV +I 
Sbjct: 266 YRTLMPEVKNYEPQNALTDLGDGLYFYREISKLAGEYLKDTGYLAYEIGYNQAKDVTKIL 325

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++    +++  KDYGGN+RV++  +
Sbjct: 326 QNNNFDVLSVIKDYGGNNRVVIAKK 350



 Score = 40.1 bits (93), Expect = 0.36,   Method: Composition-based stats.
 Identities = 3/45 (6%), Positives = 17/45 (37%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK 47
             ++   +  V  L    + +  +  L + ++  +   + + ++
Sbjct: 9  PRLEAEKLVSYVLNLDRIALYIHYERELSEDEKTSIKQYLKKMVE 53


>gi|229105921|ref|ZP_04236545.1| Protein hemK [Bacillus cereus Rock3-28]
 gi|228677495|gb|EEL31748.1| Protein hemK [Bacillus cereus Rock3-28]
          Length = 283

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GNEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S    +    DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFYKIHQKLDVVVSNPPYITEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++++P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKELLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|78043637|ref|YP_361355.1| HemK family modification methylase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995752|gb|ABB14651.1| modification methylase, HemK family [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 285

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 134/267 (50%), Gaps = 11/267 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G+S   +   P+ VL + +     + + R      +  ++G ++FY 
Sbjct: 24  PALDAELLLAHVLGISRVAIYTRPERVLSEYEWERFVDHVERRASRIPLAYLIGKKEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ +   PRPETEL+V+  + F       R +  + D+GTG+GAV +AL    P  
Sbjct: 84  LDFFVTPEVLIPRPETELMVEEGINFLRQY---RGLKLVADVGTGSGAVGVALACHIPLG 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177
               +DIS +AL++A+ NA  +GV ER      D    +      G F +I +N PYI +
Sbjct: 141 LFFLLDISEEALKVARVNAHHHGVDERVILGHGDLLEPLSKLDFSGKFSLITANLPYIPT 200

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV+  +P+I+LDGG DGL  YR +     + L +DG+  +EI   Q   +  
Sbjct: 201 EELSTLMPEVQK-EPQIALDGGEDGLMLYRRLLPEAHKLLAEDGVMLLEIAPYQGKAITA 259

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
             E+ KL+ V   KD  G+DR+++  +
Sbjct: 260 --EAEKLYRVEIKKDLAGHDRLVILRK 284


>gi|160900909|ref|YP_001566491.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Delftia acidovorans SPH-1]
 gi|160366493|gb|ABX38106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Delftia acidovorans SPH-1]
          Length = 289

 Score =  261 bits (669), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 112/263 (42%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L  V G        ++   + +L   Q         R L  E +  +LG ++
Sbjct: 20  ARIDAQMLLLHVLGRQSGGRAWLLTHDEDMLTAPQAEAYATLCARRLGTEPVAYLLGHKE 79

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE LVD AL     + +     R++DLGTG+GA+ LAL  + 
Sbjct: 80  FYGLDLAVDARVLDPRPDTETLVDWALELMPAQSQAARACRVVDLGTGSGAIALALQSQR 139

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
           P      VD S  AL +A +NA    +  +F      W   + G   FD+IVSNPPYI  
Sbjct: 140 PGATVWAVDASADALAVASANATRLQLGVQFA--HGSWLQPLAGQAPFDLIVSNPPYIRD 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   +    +P  +L  G DGL   R I       L + G   +E G++Q   V  
Sbjct: 198 DDPHL---QALAHEPLSALASGADGLVDIRAIITQAPALLVRGGWLLMEHGWDQADAVAA 254

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           +        V    D GG  R  
Sbjct: 255 LLRHAGFGDVQHRHDLGGIARCT 277


>gi|15902969|ref|NP_358519.1| HemK protein [Streptococcus pneumoniae R6]
 gi|116517180|ref|YP_816385.1| HemK protein [Streptococcus pneumoniae D39]
 gi|15458533|gb|AAK99729.1| HemK protein homolog; possible protoporphyrinogen oxidase
           [Streptococcus pneumoniae R6]
 gi|116077756|gb|ABJ55476.1| HemK protein [Streptococcus pneumoniae D39]
          Length = 279

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     DIS +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADISQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A+ NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+  + +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|294142152|ref|YP_003558130.1| hemK family protein [Shewanella violacea DSS12]
 gi|293328621|dbj|BAJ03352.1| hemK family protein [Shewanella violacea DSS12]
          Length = 280

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +       +   PD  L   Q    T  + R +    I  I+G R+F++
Sbjct: 23  PKLDAEVMLLHIIHKQRGYLYTWPDERLASEQVVDYTKMVHRRVLGTPIAHIVGEREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E   +
Sbjct: 83  LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAKVLDLGTGTGAIALSLAYEKSQW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N     +  + + ++SDWF SV    F++IVSNPPYI+     
Sbjct: 138 QITAVDKIIEAVALAKANRAHLKLQ-QVEIIKSDWFDSVTCYDFNLIVSNPPYIDETDAH 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G  G +    IA     +L   G   +E GY Q + + +    
Sbjct: 197 LDQGDVR-FEPQSALTAGEAGFADLYHIASSARDYLAPGGYLLLEHGYEQAIQLRKKMIE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 256 LGYENVATVRDFGSNDRCTLGR 277


>gi|168487486|ref|ZP_02711994.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1087-00]
 gi|183569705|gb|EDT90233.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1087-00]
          Length = 279

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFIEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|297620932|ref|YP_003709069.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Waddlia chondrophila WSU 86-1044]
 gi|297376233|gb|ADI38063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Waddlia chondrophila WSU 86-1044]
          Length = 283

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 123/263 (46%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             +++ + +    G+   ++ +  D  L D +      AI R +K E    I G  DF++
Sbjct: 22  PRKEAATIIGDALGMKPLELYMQHDRPLTDSELKRCREAIARRVKGEPNQYIRGIVDFFD 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             LT+      PR ETE+LVD  +       E      + D+ TG+G + +A+ K+ P  
Sbjct: 82  CVLTVDKRVLIPRMETEILVDKIVKEL--ENEDLKGKTLWDVCTGSGCIGIAIKKKFPEL 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +    D+S  ALE A  NAV NGV  R   ++ D     +G   D IVSNPPYI      
Sbjct: 140 EVALSDLSADALEAASENAVKNGVDVRI--VKGDLLEPFKGERADFIVSNPPYIREEEFS 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L +EV++F+P+++L  G  GL  YR   + +   L   G   +EIG  Q  D+V+IF  
Sbjct: 198 TLAVEVKNFEPKMALVSGETGLEIYRRFNEELPGFLKAGGRIWMEIGMGQGEDIVKIFSG 257

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V   +D+   DR     R
Sbjct: 258 ENWENVWFEQDWSQLDRFFYATR 280


>gi|225858812|ref|YP_002740322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 70585]
 gi|225720454|gb|ACO16308.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae 70585]
          Length = 279

 Score =  261 bits (668), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 14/262 (5%)

Query: 6   DSHSFLCRV----TGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++      V      LS    I      +  + ++ F+ +   +   H+    I+G  DF
Sbjct: 20  EAEIL-SFVYRSLKNLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + L +      PRPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P
Sbjct: 79  YGMHLKVDERVLIPRPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRP 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            +     DIS +AL++A+ NA    +  +    +SD F+ +   +D+IVSNPPYI     
Sbjct: 134 DWSVTAADISQEALDLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDE 191

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +GL V   +P ++L    DGL+ YR IA+  + +L   G   +EIGY Q   V  +F 
Sbjct: 192 SEVGLNVLYSEPHLALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFR 251

Query: 241 SR-KLFLVNAFKDYGGNDRVLL 261
                  V   KD  G +R+++
Sbjct: 252 KHLPEKRVRTLKDQFGQNRMVV 273


>gi|226946180|ref|YP_002801253.1| Modification methylase HemK [Azotobacter vinelandii DJ]
 gi|226721107|gb|ACO80278.1| Modification methylase HemK [Azotobacter vinelandii DJ]
          Length = 276

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G  +  +   P+  + +         + R    E +  ILG + F++
Sbjct: 19  PRLDAEWLLAAALGKPASYLRAWPEREVPEAPAVRFAADLARRRAGEPVAYILGRQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++  T  PRP+TELLV++ALA     +       +LDLGTG+GA+ LAL  E P +
Sbjct: 79  LDLEVAPATLIPRPDTELLVETALA-----LLPATPAEVLDLGTGSGAIALALAAERPAW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +  GVD   +A+ +A+ N    G+      L SDWFS+++G  F +I  NPPYI +    
Sbjct: 134 RLTGVDRVMEAVALAERNRRRLGLG-NATFLPSDWFSALDGRRFALIAGNPPYIAADDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L  G DGL   R I      HL   G   +E G+ Q   V  +  +
Sbjct: 193 LALGDVR-FEPASALVAGADGLDDIRRIVVEAPGHLQAGGWLLLEHGFEQAGAVRGLLTT 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           R    V++ +D GG++R+ L  
Sbjct: 252 RGFVEVHSRRDLGGHERISLGR 273


>gi|47570470|ref|ZP_00241103.1| hemK protein [Bacillus cereus G9241]
 gi|47552866|gb|EAL11284.1| hemK protein [Bacillus cereus G9241]
          Length = 283

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFKEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L       +  + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFD-DEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEIVFDINGKDRMVFA 280


>gi|228949049|ref|ZP_04111321.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228810622|gb|EEM56971.1| Protein hemK [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 283

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + +K   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLYVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++++P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEYEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|217962817|ref|YP_002341395.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH187]
 gi|217067117|gb|ACJ81367.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH187]
          Length = 283

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFS-DEKIHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+  ++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQGSIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|325291371|ref|YP_004267552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324966772|gb|ADY57551.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 287

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 5/261 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L     +S  ++ ++ +  L   Q       + +  K E +  ++  R+F 
Sbjct: 28  DPRTEADLLLAHSLRISRDRLYLEREGTLTSIQADRFMELLEQRGKREPLAYLVKTREFM 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE+L++  +  +  R  K     +LDLGTG+G + +A  +    
Sbjct: 88  GLDFYVDRRVLIPRPETEMLIEKLIELAEKRAGKDKEYSLLDLGTGSGVMAIAAARYIAG 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            K   VDIS  AL +A+ NAV +GV    D  Q D F+ V    FD I++NPPY+    +
Sbjct: 148 VKITAVDISEDALTVARQNAVKHGVE--IDFRQGDLFTPVANQKFDWILTNPPYVSLPEM 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +    EV   +P ++L GG DGL  YR +A      L+  G    EIG  Q   V ++F 
Sbjct: 206 EDCSPEVLR-EPHLALCGGEDGLEIYRRLAAQAGDFLHPGGKLLAEIGSAQAPAVCKLFA 264

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
            +       F D  G +R++L
Sbjct: 265 EKGYST-KVFNDLAGLNRMIL 284


>gi|229000114|ref|ZP_04159684.1| Protein hemK [Bacillus mycoides Rock3-17]
 gi|229007634|ref|ZP_04165228.1| Protein hemK [Bacillus mycoides Rock1-4]
 gi|228753645|gb|EEM03089.1| Protein hemK [Bacillus mycoides Rock1-4]
 gi|228759651|gb|EEM08627.1| Protein hemK [Bacillus mycoides Rock3-17]
          Length = 283

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    + + Q+   TN I + +    +  ++G+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L     R+  +  + I D+GTG+GA+ + L  E+   +   V
Sbjct: 85  NEEVLIPRPETEELIVGVLDRI-QRMFGKQELHIADIGTGSGAISITLALENQNLRMYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGA--NVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + E+G  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|295697769|ref|YP_003591007.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus tusciae DSM 2912]
 gi|295413371|gb|ADG07863.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus tusciae DSM 2912]
          Length = 296

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 20/278 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A   +   + RV G+    +   PD VL   +   +   + R  + E +  I G  +FY
Sbjct: 21  DARLSAEVLIQRVLGVGKAHLYAHPDRVLTQEEERRIAEGVSRRARREPLQYITGVVEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +  D   PRPETE LV+  L +        +   I D+GTG+GA+ +AL    P 
Sbjct: 81  GLELEVGPDVLIPRPETEGLVERVLGWRSMW----ERPLIADVGTGSGALAVALAHHWPG 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
            + VG+D+S  A ++A  N   +G+++R   +Q D    +       D++VSNPPYI S 
Sbjct: 137 ARIVGIDVSPGAFQVASRNIRRHGLADRVSLVQGDLLFPLLDHGQRADIVVSNPPYIPSG 196

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +D L  EV  F+PR +LDGG DGL  YR +   +   L++ G  +VE+G  Q   V R+
Sbjct: 197 DIDGLQPEVARFEPRAALDGGGDGLDVYRRLFFQLPEVLSRPGAVAVEVGAGQAGAVRRL 256

Query: 239 FES-------------RKLFLVNAFKDYGGNDRVLLFC 263
            E                       +D  G +RV+   
Sbjct: 257 LEQSCGVVAGGAGGAAAVQMETGTDRDLAGIERVVWAR 294


>gi|332361224|gb|EGJ39028.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1056]
          Length = 276

 Score =  261 bits (668), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H     I G  D
Sbjct: 17  AGEEAESLSFVYRALKNLSFTDFVLKLRTEVSQEDRDQLKTIQEQLLAHRPAQYINGRSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
             ++    D+S  AL +A+ NA +  +S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 SDWQITASDLSGDALALAEENAQSCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           E       +   KD  G DR++
Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271


>gi|300117842|ref|ZP_07055609.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus SJ1]
 gi|298724706|gb|EFI65381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus SJ1]
          Length = 283

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L       +  + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFD-DEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|228994047|ref|ZP_04153948.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
 gi|228765695|gb|EEM14348.1| Protein hemK [Bacillus pseudomycoides DSM 12442]
          Length = 283

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    + + Q+   TN I + +    +  ++G+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGLMMNMREEMSEEQQKTFTNFIHKHVGGIPVQYMMGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L     R+  +  + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLDRI-QRMFGKQELHIADIGTGSGAISITLALENQNLHMYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGA--NVTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L +  + + E+G  Q  DV R+ +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQRKAIVAFEVGIGQGEDVKRLLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|304440461|ref|ZP_07400350.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371213|gb|EFM24830.1| protein-(glutamine-N5) methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 267

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 15/258 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  V  +S   +I++ +  L+  +   + + + R    E +  ILG  +FY + +
Sbjct: 25  ESRRILMEVLDVSMTYLILNEEQELNKEKEEEIIDILNRRKHGEPLQYILGHSEFYGLDI 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L      PRP+TE+ V++ L         +   + L+LG G+GAV  ++ K S   K  
Sbjct: 85  LLKGKVLIPRPDTEVSVENILKRL------KSGDKFLELGVGSGAVICSVAKNS-DAKCY 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDIS  ALE  K N     +    +   SD F +VEG +D+I SNPPYI+S  +  L +
Sbjct: 138 GVDISEDALECTKLNIENLNLK-NVEVKYSDLFENVEGKYDIIYSNPPYIKSHEILNLQV 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           E+ D++PR++LDGG DGL  Y+ I      +LN+ G    EIG++Q       FE     
Sbjct: 197 EITDYEPRLALDGGEDGLDFYKKIISEYRDYLNEGGYLIFEIGHDQGE----FFEKLG-- 250

Query: 246 LVNAFKDYGGNDRVLLFC 263
                KD  G  RV++  
Sbjct: 251 -AEIIKDLNGLPRVVIMR 267


>gi|229164276|ref|ZP_04292209.1| Protein hemK [Bacillus cereus R309803]
 gi|228619216|gb|EEK76109.1| Protein hemK [Bacillus cereus R309803]
          Length = 283

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITVEQEKSFTEFIHKHVEGIPIQYMMGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L         ++ + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERVERHFGDKE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         D++VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VKFYHGDLLSPFYETGQKLDIVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|78358025|ref|YP_389474.1| HemK family modification methylase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78220430|gb|ABB39779.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 297

 Score =  261 bits (668), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 11/265 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V      Q++V    +L +++       I+R  + E +  + G R+FY     
Sbjct: 35  AELLLAHVLRTDRLQLLVRRGHMLTEKEYAQAEKLILRRAEGEPVAYLTGSREFYGREFA 94

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S+DT  PRP+TELL+D+              +R  DLGTG+G + +++  E P   G  
Sbjct: 95  VSTDTLIPRPDTELLIDT----LKKEYPPHAALRFADLGTGSGCIAVSVAAEMPSAHGTA 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           VDIS  AL  A+ NA  + V++R   +Q+D+ S +     FDV++SNPPY+ +   + L 
Sbjct: 151 VDISSGALHTARENAARHRVADRVAFVQADFTSPLFRPASFDVVLSNPPYVSATEYETLS 210

Query: 185 LEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            EVR  +P+ +L        GL H   +       L   GL  +E G+ Q  D++ + ++
Sbjct: 211 PEVRCHEPQRALVPDTPASTGLEHAAALLPLAFGWLKPGGLFLMEFGWKQGPDIMAMVKA 270

Query: 242 -RKLFLVNAF-KDYGGNDRVLLFCR 264
               + V    +D  G DR L   R
Sbjct: 271 QHGQWTVAVILQDLAGRDRALYARR 295


>gi|88800297|ref|ZP_01115864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Reinekea sp. MED297]
 gi|88777012|gb|EAR08220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Reinekea sp. MED297]
          Length = 275

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 9/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L  V       +   P+  L + Q     +   R L  E +  I+G R+F+++
Sbjct: 19  ALDVDVLLATVLEKPRSFLYAWPEHELSEAQHHRFQDGCQRRLSGEPVAYIVGEREFWSL 78

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L  +  T  PRP+TE+LV+  LA +          R +DLGTGTGA+ LAL  E P ++
Sbjct: 79  PLKTAPHTLIPRPDTEVLVEQVLADA-----PDGEYRCVDLGTGTGAIALALKSERPKWQ 133

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
             G+D   +A+ +A  NA   G+   F     +W + + +   D++VSNPPYI++     
Sbjct: 134 VEGIDRVPEAVALATENAQRLGLDVTFRV--GNWCADLADDSIDILVSNPPYIDADDEHL 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +VR F+P  +L     GL+    I D   R L   G   +E G+ Q   V  + +  
Sbjct: 192 SQGDVR-FEPESALVADQHGLADISIIVDQAQRCLRPGGGVFIEHGWQQGDAVRALLQDA 250

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V+  +DYG  +RV    +
Sbjct: 251 GFLRVDTRRDYGNQERVTFGWK 272


>gi|325696482|gb|EGD38372.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK160]
          Length = 276

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P +K    D+S  AL +A  NA    +S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 PDWKITASDLSNDALALAAENAQFCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA     +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYLEIGYKQGDGVAELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KQSFPHKRIRILKDQFGKDRMV 271


>gi|227890653|ref|ZP_04008458.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
 gi|227867591|gb|EEJ75012.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius ATCC 11741]
 gi|300214392|gb|ADJ78808.1| Peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius CECT 5713]
          Length = 279

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 86/258 (33%), Positives = 131/258 (50%), Gaps = 7/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D    +C   G +  Q++++  + +DD+    L   I    +   +  ++G++DFY +
Sbjct: 24  LEDVDYLICGQMGWNKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      + 
Sbjct: 84  RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       +
Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF+   
Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGKAVKKIFKDSF 257

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD  GNDR++
Sbjct: 258 PNSEITLKKDINGNDRMI 275


>gi|332202883|gb|EGJ16951.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA47901]
          Length = 279

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ N   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVENIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|229176004|ref|ZP_04303500.1| Protein hemK [Bacillus cereus MM3]
 gi|228607497|gb|EEK64823.1| Protein hemK [Bacillus cereus MM3]
          Length = 283

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYKTSQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|94312134|ref|YP_585344.1| HemK family modification methylase [Cupriavidus metallidurans CH34]
 gi|93355986|gb|ABF10075.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Cupriavidus metallidurans CH34]
          Length = 310

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            + ++   L  VTG +  Q+I   +  LD  +R      + R L  E +  ++G R+F+ 
Sbjct: 51  PVLEARMLLSHVTGFTRTQLITRDNDHLDAPKRDAFATLLARRLTGEPMAYLIGEREFFG 110

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRP+T    + A   SL RI      R+LD+GTG+G + + + +E P  
Sbjct: 111 RTFRVTPDVLIPRPDT----EVAAEASLARIADVKAPRVLDMGTGSGILAVTIARERPDA 166

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +    DIS  AL +A+ NA     +E    L SDW+  +     F++IVSNPPYI     
Sbjct: 167 EVWATDISRGALMVAEDNARALQ-AENIRFLVSDWYEDLPVGLCFNLIVSNPPYIAEGDP 225

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  ++R F+P  +L    DGLS   TI  G +  L   G   +E GY+Q   +     
Sbjct: 226 HLVEGDLR-FEPIDALTDHEDGLSDLATIVAGATARLLPGGWLLMEHGYDQGAAMRAQLA 284

Query: 241 SRKLFLVNAFKDYGGNDRV 259
                 V   +D  G +R 
Sbjct: 285 EAGFVEVFTTRDLAGLERC 303


>gi|149019617|ref|ZP_01834936.1| HemK protein [Streptococcus pneumoniae SP23-BS72]
 gi|147930992|gb|EDK81972.1| HemK protein [Streptococcus pneumoniae SP23-BS72]
          Length = 279

 Score =  261 bits (667), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLASENAKNQNL--QIFFKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|168483092|ref|ZP_02708044.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1873-00]
 gi|182683969|ref|YP_001835716.1| hemK protein [Streptococcus pneumoniae CGSP14]
 gi|172043511|gb|EDT51557.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC1873-00]
 gi|182629303|gb|ACB90251.1| hemK protein [Streptococcus pneumoniae CGSP14]
          Length = 279

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|30265351|ref|NP_847728.1| HemK family modification methylase [Bacillus anthracis str. Ames]
 gi|47530890|ref|YP_022239.1| HemK family modification methylase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49188163|ref|YP_031416.1| HemK family modification methylase [Bacillus anthracis str. Sterne]
 gi|165871296|ref|ZP_02215945.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
 gi|167636691|ref|ZP_02394979.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
 gi|170688140|ref|ZP_02879351.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0465]
 gi|170709377|ref|ZP_02899790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0389]
 gi|177651883|ref|ZP_02934466.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0174]
 gi|196042385|ref|ZP_03109650.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus NVH0597-99]
 gi|227818091|ref|YP_002818100.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CDC 684]
 gi|228930336|ref|ZP_04093340.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|228936613|ref|ZP_04099407.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|229094440|ref|ZP_04225512.1| Protein hemK [Bacillus cereus Rock3-42]
 gi|229602075|ref|YP_002869543.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0248]
 gi|254686249|ref|ZP_05150108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CNEVA-9066]
 gi|254724244|ref|ZP_05186028.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A1055]
 gi|254735256|ref|ZP_05192965.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Western North America USA6153]
 gi|254744459|ref|ZP_05202139.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Kruger B]
 gi|254755797|ref|ZP_05207829.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Vollum]
 gi|254762137|ref|ZP_05213983.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Australia 94]
 gi|301056796|ref|YP_003795007.1| HemK family modification methylase [Bacillus anthracis CI]
 gi|30260029|gb|AAP29214.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. Ames]
 gi|47506038|gb|AAT34714.1| modification methylase, HemK family [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49182090|gb|AAT57466.1| modification methylase, HemK family [Bacillus anthracis str.
           Sterne]
 gi|164712963|gb|EDR18491.1| modification methylase, HemK family [Bacillus anthracis str. A0488]
 gi|167527891|gb|EDR90713.1| modification methylase, HemK family [Bacillus anthracis str. A0442]
 gi|170125725|gb|EDS94639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0389]
 gi|170667833|gb|EDT18585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0465]
 gi|172082587|gb|EDT67651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0174]
 gi|196026777|gb|EDX65419.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus NVH0597-99]
 gi|227005279|gb|ACP15022.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. CDC 684]
 gi|228688977|gb|EEL42804.1| Protein hemK [Bacillus cereus Rock3-42]
 gi|228823048|gb|EEM68886.1| Protein hemK [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228829322|gb|EEM74955.1| Protein hemK [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|229266483|gb|ACQ48120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus anthracis str. A0248]
 gi|300378965|gb|ADK07869.1| modification methylase, HemK family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 283

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|266621434|ref|ZP_06114369.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM
           13479]
 gi|288866873|gb|EFC99171.1| protein-(glutamine-N5) methyltransferase [Clostridium hathewayi DSM
           13479]
          Length = 326

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 80/303 (26%), Positives = 125/303 (41%), Gaps = 49/303 (16%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIHRILG 56
           +A  D+   L           ++  +  + D              I +  +   + +I G
Sbjct: 23  EAELDAKYLLFEAFQTDMVHFLMHRNEEVKDEDSVKRTVADYRRMIEKRSERIPLQQITG 82

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            R+F  +  +++     PR +TE LV+  L        +     +LDL TG+G + ++L 
Sbjct: 83  SREFMGLEFSVNEYVLIPRQDTETLVEQVLKDF-----QGKNPEVLDLCTGSGCIGISLS 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS----------------------------- 147
               + +    DIS KAL +AK NA     +                             
Sbjct: 138 ILGGWQEVTLADISLKALLVAKKNAEDLMTAKLHPIRLSSEGQKESPWRWRLTSELPGME 197

Query: 148 ------ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
                 +    ++SD FSS+ G     FDVIVSNPPYI + +++ L  EVRD +PR++LD
Sbjct: 198 DKTAGVQNITLVESDLFSSLSGDGKRKFDVIVSNPPYIPTNVIEELEPEVRDHEPRLALD 257

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           G  DGL  YR +A     +L   G    EIGY+Q   V  +        V  ++D  G D
Sbjct: 258 GMEDGLYFYRRLAAECGSYLKPGGTVYFEIGYDQGQAVSGLLREAGFQNVLVYQDAPGLD 317

Query: 258 RVL 260
           RV+
Sbjct: 318 RVV 320


>gi|218906506|ref|YP_002454340.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH820]
 gi|229124832|ref|ZP_04254010.1| Protein hemK [Bacillus cereus 95/8201]
 gi|218534962|gb|ACK87360.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus AH820]
 gi|228658623|gb|EEL14285.1| Protein hemK [Bacillus cereus 95/8201]
          Length = 283

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + +K   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVKGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLYVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|167564256|ref|ZP_02357172.1| protein hemK [Burkholderia oklahomensis EO147]
          Length = 288

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + ++ G R+F+ +  
Sbjct: 27  DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEARRAAGEPVAQLTGAREFFGLEF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +  
Sbjct: 87  EITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDARVW 142

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA       R       L+SDW+++++    F VIVSNPPYI    
Sbjct: 143 ALDRSAAALDVARRNARKLLAPARPGGPLQFLESDWYAALDSGRRFHVIVSNPPYIARHD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V    
Sbjct: 203 PHLAEGDLR-FEPRGALTDDDDGLAAIRAIVAGAHAFLAPGGALWIEHGYDQAAAVRARL 261

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+     V +  D    +R  
Sbjct: 262 EAAGFADVESLADLASIERAT 282


>gi|70732475|ref|YP_262237.1| hemK protein [Pseudomonas fluorescens Pf-5]
 gi|68346774|gb|AAY94380.1| hemK protein [Pseudomonas fluorescens Pf-5]
          Length = 276

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 8/250 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +   P+ ++        T+ + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKPRSFLHTWPERIVPSEAALVFTDYLQRRRSGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TE      L  +   +       +LDLGTG+GA+ LAL  E P ++   VD   +A+ 
Sbjct: 92  PDTE-----LLVEAALELLPATPATVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     + +    L S WFSS+E   FD+I+SNPPYI       +  +VR F+P  
Sbjct: 147 LAERNRQRLQL-DNVSVLSSHWFSSIESRRFDLIISNPPYIAEADPHLVAGDVR-FEPES 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I     +HL   G   +E GY+Q   V  +  ++    V++  D G
Sbjct: 205 ALVAGKDGLDDLRLIVTQAPQHLEAGGWLMLEHGYDQAAAVRELLAAQGFIEVHSRVDLG 264

Query: 255 GNDRVLLFCR 264
           G++R+ L CR
Sbjct: 265 GHERISLGCR 274


>gi|225867309|ref|YP_002752687.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus 03BB102]
 gi|225789080|gb|ACO29297.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus 03BB102]
          Length = 283

 Score =  261 bits (667), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T +I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTESIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|52140234|ref|YP_086597.1| HemK family modification methylase [Bacillus cereus E33L]
 gi|51973703|gb|AAU15253.1| modification methylase, HemK family [Bacillus cereus E33L]
          Length = 283

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITVEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + + + L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPKVLQKKAIVAFEIGVGQGEDVKGLLQKAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|229020547|ref|ZP_04177292.1| Protein hemK [Bacillus cereus AH1273]
 gi|229026768|ref|ZP_04183100.1| Protein hemK [Bacillus cereus AH1272]
 gi|228734491|gb|EEL85153.1| Protein hemK [Bacillus cereus AH1272]
 gi|228740767|gb|EEL91020.1| Protein hemK [Bacillus cereus AH1273]
          Length = 283

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G+  FY     +
Sbjct: 25  ELVLCHVLKTNRTGMLMNMREEITAEQETSFTEFIHKHVEGIPIQYMMGYEIFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA   G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKALGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLKKKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|148994242|ref|ZP_01823535.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68]
 gi|148998843|ref|ZP_01826279.1| HemK protein [Streptococcus pneumoniae SP11-BS70]
 gi|168488842|ref|ZP_02713041.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae SP195]
 gi|168494450|ref|ZP_02718593.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC3059-06]
 gi|221231774|ref|YP_002510926.1| methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854522|ref|YP_002736034.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae JJA]
 gi|225861004|ref|YP_002742513.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230459|ref|ZP_06964140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255329|ref|ZP_06978915.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502959|ref|YP_003724899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|307067802|ref|YP_003876768.1| methylase of polypeptide chain release factors [Streptococcus
           pneumoniae AP200]
 gi|147755270|gb|EDK62321.1| HemK protein [Streptococcus pneumoniae SP11-BS70]
 gi|147927383|gb|EDK78414.1| serine hydroxymethyltransferase [Streptococcus pneumoniae SP9-BS68]
 gi|183572386|gb|EDT92914.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae SP195]
 gi|183575598|gb|EDT96126.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC3059-06]
 gi|220674234|emb|CAR68769.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225724246|gb|ACO20099.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae JJA]
 gi|225727908|gb|ACO23759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238554|gb|ADI69685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus pneumoniae TCH8431/19A]
 gi|301794157|emb|CBW36567.1| putative methyltransferase [Streptococcus pneumoniae INV104]
 gi|306409339|gb|ADM84766.1| Methylase of polypeptide chain release factors [Streptococcus
           pneumoniae AP200]
 gi|327389395|gb|EGE87740.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA04375]
 gi|332073353|gb|EGI83832.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA17570]
 gi|332075369|gb|EGI85838.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA41301]
 gi|332201492|gb|EGJ15562.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae GA47368]
          Length = 279

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKKVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|209516554|ref|ZP_03265408.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. H160]
 gi|209502995|gb|EEA02997.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. H160]
          Length = 295

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   +  L             R +  E + +++G R+F+ + 
Sbjct: 30  LEARILLTHVLGWRRTQLITRGEEPLLLADVERYRALEARRVAGEPVAQLVGAREFFGLE 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++ALA     IE R   R+LDLGTGTGA+ +A+    P  + 
Sbjct: 90  FEVTPHVLIPRPETELLVETALA----AIEHRSRPRVLDLGTGTGAIAVAIASMRPDAQV 145

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S  AL +A  N      ++R       L SDW+ S++    FD IVSNPPYI S 
Sbjct: 146 WALDRSADALVVAARNGARLLDAKRPGGAVAFLHSDWYGSLDAALRFDAIVSNPPYIASG 205

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+PR +L    DGLS  R I  G    L  DG   +E GY+Q   V  +
Sbjct: 206 DPHLSEGDLR-FEPRSALTDEADGLSAIRAIVAGAPERLATDGALWIEHGYDQAEAVRAL 264

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             +R    V + +D  G +R+
Sbjct: 265 LSARGFAEVRSERDLAGIERI 285


>gi|42784500|ref|NP_981747.1| HemK family modification methylase [Bacillus cereus ATCC 10987]
 gi|42740432|gb|AAS44355.1| modification methylase, HemK family [Bacillus cereus ATCC 10987]
          Length = 283

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGILMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+A+ NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAQENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|327460377|gb|EGF06714.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1057]
          Length = 276

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + +    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYQALNKLSFTDFVLKLRTEVSQEDRKQLKAIQEQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P +K    D+S  AL +A  NA    +S     +QSD F ++ G FD+IVSNPPYI    
Sbjct: 132 PDWKITASDLSNDALALAAENAQFCNLS--LTFVQSDCFEAISGSFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA     +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAGQAEDYLTEKGKIYLEIGYKQGDGVAELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KQSFPHKRIRILKDQFGKDRMV 271


>gi|187930215|ref|YP_001900702.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia pickettii 12J]
 gi|187727105|gb|ACD28270.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ralstonia pickettii 12J]
          Length = 300

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 118/262 (45%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D   R  ++    R L  E +  +LG R+F+ 
Sbjct: 28  PALEARMLVSHVTGLSRVQLITQDTCAIDVAARARISELAARRLAGEPMAYLLGEREFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL      +E+ D   +LD+GTG+G + + +       
Sbjct: 88  RTFKVTPAVLIPRPDTELLVEQALD----HLEECDAPAVLDMGTGSGIIAITIALARRDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +    T   DW+ ++ G      FD+I SNPPYI +
Sbjct: 144 RVWATDASADALAVAIDNAKALGAT-NVQTALGDWYGALAGTDAPPAFDLIASNPPYIAA 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H  +I  G    L   G   VE GY+Q   V  
Sbjct: 203 TDAHLDQGDLR-FEPASALTDHDDGLRHLCSIVAGAPARLVSGGWLLVEHGYDQGEPVRA 261

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
           +        V   +D  G+DR 
Sbjct: 262 LLGGAGFANVFTAQDLAGHDRC 283


>gi|228477567|ref|ZP_04062200.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus salivarius SK126]
 gi|228250711|gb|EEK09909.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus salivarius SK126]
          Length = 277

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 78/247 (31%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +A  +  KH+    ILG+ DF+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDAELLAHAFSQLKKHKPAQYILGYEDFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         +++LD+GTG+GA+ ++L K  P ++    D+S  A+E+
Sbjct: 94  ETEELVDLILAEN-----PSTELKVLDIGTGSGAISVSLKKSRPLWQVTASDLSVDAIEL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA  N V+     +QSD F ++ G FD+IVSNPPYI     + +G+ V   +P+++L
Sbjct: 149 AQENAKLNQVA--ISFVQSDVFENISGSFDIIVSNPPYISENDKNEVGINVLASEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +GL+ YR I +   ++L   G    EIGY Q  D+  +         V   KD  G
Sbjct: 207 FADEEGLAIYRQIIEEADKYLTPSGKLYFEIGYKQGQDLKGLLSLHFPDKRVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|171911848|ref|ZP_02927318.1| modification methylase, HemK family protein [Verrucomicrobium
           spinosum DSM 4136]
          Length = 307

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  +    L  V G     + +  D  L + +   L   + R  + E +  +LG  +F+
Sbjct: 22  DARLNMEHLLAHVLGCRRLDLYLRFDQTLAEPELQPLRVLLKRRGEGEPLQHLLGTVEFH 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +           PRPETE LV   +    P+ E     R+LD+GTG+G + L+L K  P 
Sbjct: 82  DSEFVCDHRALIPRPETEHLVHLLVDKWFPKSE--PPHRLLDVGTGSGCIGLSLAKAWPA 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            + + VDIS  ALE+A+ NA   G++ +    ++SD     +G FD+IV+N PYI +  +
Sbjct: 140 AEVLLVDISEDALELARLNAGRLGLNGQKVRLVRSDLLEHADGAFDLIVANLPYIPTAEL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV   DP ++LDGG DGL     + +    HL ++GL ++E+ Y+Q   V    +
Sbjct: 200 KEISREVA-HDPNLALDGGPDGLVIVDRLLETAPEHLTENGLLALELHYDQASAVSERLQ 258

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
                 + + +D  G  R + 
Sbjct: 259 KLGFQAIQSAEDLAGIPRFVF 279


>gi|149012960|ref|ZP_01833849.1| HemK protein [Streptococcus pneumoniae SP19-BS75]
 gi|303255577|ref|ZP_07341628.1| hemK protein [Streptococcus pneumoniae BS455]
 gi|303260465|ref|ZP_07346433.1| hemK protein [Streptococcus pneumoniae SP-BS293]
 gi|303262822|ref|ZP_07348759.1| hemK protein [Streptococcus pneumoniae SP14-BS292]
 gi|303265292|ref|ZP_07351202.1| hemK protein [Streptococcus pneumoniae BS397]
 gi|303266499|ref|ZP_07352386.1| hemK protein [Streptococcus pneumoniae BS457]
 gi|303268382|ref|ZP_07354178.1| hemK protein [Streptococcus pneumoniae BS458]
 gi|147763113|gb|EDK70054.1| HemK protein [Streptococcus pneumoniae SP19-BS75]
 gi|301801855|emb|CBW34573.1| putative methyltransferase [Streptococcus pneumoniae INV200]
 gi|302597433|gb|EFL64528.1| hemK protein [Streptococcus pneumoniae BS455]
 gi|302636020|gb|EFL66518.1| hemK protein [Streptococcus pneumoniae SP14-BS292]
 gi|302638377|gb|EFL68844.1| hemK protein [Streptococcus pneumoniae SP-BS293]
 gi|302642103|gb|EFL72454.1| hemK protein [Streptococcus pneumoniae BS458]
 gi|302643950|gb|EFL74210.1| hemK protein [Streptococcus pneumoniae BS457]
 gi|302645157|gb|EFL75394.1| hemK protein [Streptococcus pneumoniae BS397]
          Length = 279

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|163750756|ref|ZP_02157991.1| hemK family protein [Shewanella benthica KT99]
 gi|161329451|gb|EDQ00445.1| hemK family protein [Shewanella benthica KT99]
          Length = 278

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +       +   PD  L   Q    T  + R +    I  I+G R+F++
Sbjct: 21  PKLDAEVMLLHIIHQQRGYLYTWPDERLTSDQVVDYTKMVQRRVLGTPIAHIVGEREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++  T  PRP+TE+LV++AL      +   +  ++LDLGTGTGA+ L+L  E   +
Sbjct: 81  LPFMVNPTTLIPRPDTEILVETAL-----NLPLAENAQVLDLGTGTGAIALSLAYEKKEW 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD   +A+ +AK+N     +  + + +QSDWF SV    F++IVSNPPYI+     
Sbjct: 136 QITAVDKIIEAVALAKANREHLKLQ-QVEIIQSDWFDSVTCYDFNLIVSNPPYIDETDAH 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P+ +L  G  G +    IA     +L   G   +E GY Q + + +    
Sbjct: 195 LDQGDVR-FEPQSALTAGEAGFADLYYIAASARDYLAPGGYLLLEHGYQQAMPLRKKMIE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V   +D+G NDR  L  
Sbjct: 254 LGYENVATVRDFGSNDRCTLGR 275


>gi|228917937|ref|ZP_04081473.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228841734|gb|EEM86845.1| Protein hemK [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
          Length = 283

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLDRIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRALS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|77405502|ref|ZP_00782594.1| modification methylase, HemK family [Streptococcus agalactiae H36B]
 gi|77175899|gb|EAO78676.1| modification methylase, HemK family [Streptococcus agalactiae H36B]
          Length = 276

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 80/253 (31%), Positives = 124/253 (49%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   S+   +++ +S + D  +  + N   +  KH S   I G   F ++   +   
Sbjct: 28  LKDLKQWSTTDCLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDER 87

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LVD  L+ +     K +   +LD+GTG+GA+ ++L KE P +  +  DIS
Sbjct: 88  VLIPRPETEELVDLILSEN-----KVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDIS 142

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL++AK NA  N        ++SD FS++   FD+IVSNPPYI     D +G  V   
Sbjct: 143 VSALDLAKENA--NNCDAEVTFIESDVFSNISDKFDIIVSNPPYISYNDKDEVGKNVLAS 200

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNA 249
           +P  +L    +GL+ YR I +    +L   G    EIGY Q  D+  + +          
Sbjct: 201 EPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRV 260

Query: 250 FKDYGGNDRVLLF 262
            KD  G DR+++ 
Sbjct: 261 LKDIFGKDRMVVL 273


>gi|327470058|gb|EGF15522.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK330]
          Length = 276

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRTEVSLEDREQLKAIQGQVLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL+   
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALVNSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+S     +QSD   S++G FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSKDALSLAADNAQSCGLS--LTFVQSDCLDSIQGKFDIIVSNPPYISEAN 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q   V  + 
Sbjct: 190 KNEVGLNVLTSEPHMALFAEEDGCAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDSVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKQIRVLKDQFGKDRMV 271


>gi|229158890|ref|ZP_04286947.1| Protein hemK [Bacillus cereus ATCC 4342]
 gi|228624501|gb|EEK81271.1| Protein hemK [Bacillus cereus ATCC 4342]
          Length = 283

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITVEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   D +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMDELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|149003881|ref|ZP_01828704.1| HemK protein [Streptococcus pneumoniae SP14-BS69]
 gi|237650078|ref|ZP_04524330.1| HemK protein [Streptococcus pneumoniae CCRI 1974]
 gi|237822153|ref|ZP_04597998.1| HemK protein [Streptococcus pneumoniae CCRI 1974M2]
 gi|147758111|gb|EDK65115.1| HemK protein [Streptococcus pneumoniae SP14-BS69]
          Length = 279

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLATHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     DIS +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPAWSVTAADISQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A+ NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 DLARENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLYSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ YR IA+  + +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYRRIAEDATDYLKDSGKIYLEIGYKQGQCVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|126725347|ref|ZP_01741189.1| Putative methylase [Rhodobacterales bacterium HTCC2150]
 gi|126704551|gb|EBA03642.1| Putative methylase [Rhodobacterales bacterium HTCC2150]
          Length = 277

 Score =  260 bits (666), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A RD+   +     ++  ++ +     +  +Q      ++        + +I+G R FY
Sbjct: 21  DAARDARRLMAFALDVAPDRLTLVSGDEISLKQAIRFEESVASRALGRPVSQIIGRRHFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ D  +PRPETE+L+ +AL         +   ++LDLGTG+GA+ + LL E   
Sbjct: 81  GRDFIVTPDVLDPRPETEILISAALE--------QPFQKVLDLGTGSGAILVTLLAEQMG 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G G DIS  AL +A  NAV   VSER D ++SDWF +V+G FD+IVSNPPY+ +    
Sbjct: 133 ANGQGADISDAALNVASRNAVALNVSERADFVKSDWFENVDGDFDLIVSNPPYVTADEYS 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   VR+F+P+++L  G DGL  YR I + +   L   G   VEIG  Q   V  +F+ 
Sbjct: 193 ALDKGVREFEPKLALTPGGDGLMPYRLITERIQSFLRPFGRLLVEIGPTQGAAVKAMFKE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V   KD+   DRV++  
Sbjct: 253 SGLSEVQVLKDFDARDRVVIGR 274


>gi|154498436|ref|ZP_02036814.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC
           29799]
 gi|150272504|gb|EDM99689.1| hypothetical protein BACCAP_02425 [Bacteroides capillosus ATCC
           29799]
          Length = 287

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 132/261 (50%), Gaps = 6/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   +C   G +  Q + D      D     +   + R L+ E +  ++G  +FY 
Sbjct: 24  AQLEARELVCFAAGKNREQFLRDMSLYASDEVEAKVAELMNRRLEGEPVAYLIGEWEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S D   PR +TE+L + A+   L      +  R+LDL  G+G V LA+   +P  
Sbjct: 84  LPLDISRDVLIPRADTEVLAEQAI---LAARAAGEGARVLDLCAGSGCVGLAVAANAPQC 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
           + V  D+S +AL+I + N   N ++ R   +Q+D     SSV   FDVI SNPPYI +  
Sbjct: 141 RTVLADVSEEALKICRQNIRRNDLNARVTCVQADARQAPSSVLWDFDVIASNPPYIPTRD 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L   VRD++P ++LDGG DGL  YR IA+     L   G+   E+G  Q  DV +I 
Sbjct: 201 IDGLDSSVRDYEPHLALDGGDDGLDFYRDIAEKWRTALRLGGVLLFEVGIGQAADVEQIL 260

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  +  F+D GG  RV+
Sbjct: 261 ARCGYEDIETFQDTGGIWRVV 281


>gi|189499813|ref|YP_001959283.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium phaeobacteroides BS1]
 gi|189495254|gb|ACE03802.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobium phaeobacteroides BS1]
          Length = 297

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 117/265 (44%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  V   S   + ++ D  ++  Q           LK   +  I G + FY
Sbjct: 28  EARLHAEILLAHVLQESRMDLYLNYDRPVEQPQLEAFRVLCRDRLKGRPLQYITGEQIFY 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESP 120
               ++      PRPETELL + AL          +    ILD+GTG+G + +      P
Sbjct: 88  GYSFSVDERVLIPRPETELLFEYALERWQAGAPAPESGPEILDIGTGSGCLAVLFAITVP 147

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYI 175
             +   VD+S +ALEIA  NA  +GV+ER   +QSD         + G +D+IVSNPPYI
Sbjct: 148 DARITAVDVSAEALEIAALNAEKHGVTERIRFVQSDALHPGFSEKLAGRYDLIVSNPPYI 207

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  L  EV++++P+I+L    DG + Y  I    S  L   G+   E+  +    V
Sbjct: 208 PESEWSALQKEVKEYEPKIALT-ISDGFAFYHAITRSASALLRAGGVLCFELHADGASVV 266

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260
                      +   KDY G DRV+
Sbjct: 267 SGSMRDGGYEGIAVQKDYAGLDRVI 291


>gi|328946333|gb|EGG40477.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK1087]
          Length = 276

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +    R  L     + L H     I G  D
Sbjct: 17  AGEEAESLSFVYRALKNLSFTDFVLKLRTEVSQEDRDQLKTIQEQLLAHRPAQYINGRSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FLGLSLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
             ++    D+S  AL +A+ NA + G+      +QSD   ++ G FD+IVSNPPYI    
Sbjct: 132 SDWQITASDLSGDALALAEENAQSCGL--NLAFVQSDCLDAISGKFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q  DV R+ 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGNDVARLL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271


>gi|254461332|ref|ZP_05074748.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacterales bacterium HTCC2083]
 gi|206677921|gb|EDZ42408.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 278

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 87/257 (33%), Positives = 133/257 (51%), Gaps = 7/257 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           +RD       V+ + + ++ +     + ++QR      + R + +  I +I+  R F+  
Sbjct: 23  MRDLRILAAHVSQVDASRMTLHMHDEVTEKQREHFKLLVNRRMSNMPISKIIQKRLFWGR 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +  +  +PR +TE L+ + L             ++LDLGTG+GA+ L L  E P   
Sbjct: 83  EFEVDLNVLDPRGDTETLIAACLKL-------GPQDKVLDLGTGSGAIGLTLTAEWPLAD 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DIS +AL++A+ N  +  V++    L+SDWF +VEG FD+IVSNPPYI     D L
Sbjct: 136 VMCTDISDEALDVARLNMKSFDVADGVRLLRSDWFEAVEGRFDLIVSNPPYIALEEWDGL 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR FDPR++L    DGLS YR I      +L KDG   VEIG+ Q  DV  ++ +  
Sbjct: 196 DFEVRGFDPRMALTDEADGLSCYRVIVAQAGAYLEKDGHLMVEIGHAQGRDVQDLYAAAG 255

Query: 244 LFLVNAFKDYGGNDRVL 260
              +    D  G DRV+
Sbjct: 256 FTQITCLPDLAGRDRVV 272


>gi|308233417|ref|ZP_07664154.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae DSM 15829]
 gi|328944391|ref|ZP_08241853.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM
           15829]
 gi|327490975|gb|EGF22752.1| protein-(glutamine-N5) methyltransferase [Atopobium vaginae DSM
           15829]
          Length = 526

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 5/262 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V G S  ++ +  D VLD  Q   +   +    + + +  I G   F ++ + 
Sbjct: 31  AEILLSSVMGFSRVELYLHYDQVLDASQLNAMHQRVEARSQGKPLQYITGEMPFRHIIMQ 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
                  PRPETE+LVD  +A      E     R+L++GTG+G + L+L  E      + 
Sbjct: 91  CKPGVLIPRPETEVLVDIGIAALKEAHEYHRQPRVLEIGTGSGCIALSLASEVDSCTVLA 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDC 182
            D+S  ALE+A+ N     +  R   +       V     G FD+++SNPPY+ +  V  
Sbjct: 151 TDVSQDALELAQRNCQALHLEHRVTFVSCSIAQGVNPSYYGQFDLLISNPPYVPTSAVKT 210

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  F+P ++LDGG DGL  ++ I +     L   G+  VE+  +       +  + 
Sbjct: 211 LPAEVALFEPHLALDGGKDGLDIFQKILETAPHMLRPGGMLCVELFEDNVDKAQALCVAS 270

Query: 243 K-LFLVNAFKDYGGNDRVLLFC 263
                V   +D     R L+  
Sbjct: 271 GVWQKVYIERDLTHRKRFLVAR 292


>gi|237755640|ref|ZP_04584253.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692204|gb|EEP61199.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 291

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 11/269 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   + ++  L  H +I  PD  + +     L     +      +  +   ++F+
Sbjct: 21  NPASEASILISKILDLPKHYIISYPDLEISEEDAKKLVVLSEKRASGYPMAYLTKSKEFF 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESP 120
            +   +      PRPETE+LV+  +     +++      I L++G G+G + ++LLK   
Sbjct: 81  GLDFYIEEGILIPRPETEILVEKVIE----KLQNAKGELIGLEVGIGSGCISVSLLKNIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYI 175
             K +G+DIS KALEI + NA  +GV +R    + D  +           D +VSNPPYI
Sbjct: 137 NLKIIGIDISEKALEITEKNAEIHGVLDRLKLFKFDIMNEKMNSLNLPKLDFVVSNPPYI 196

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +      L  EV+  +P+ +L  G +G   Y  I + +   L +DG  + E+G  Q   V
Sbjct: 197 KEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKV 255

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +I E      +  +KD  G DRV++  +
Sbjct: 256 KQILEDNGYKNIEIYKDLAGIDRVIIASK 284


>gi|157150169|ref|YP_001450440.1| protoporphyrinogen oxidase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157074963|gb|ABV09646.1| possible protoporphyrinogen oxidase [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 276

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    +S    ++     +   +R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNEISFTDFVLKLRIEVSQEEREQLKAIQKQLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FNGLNLKVDERVLIPRPETEELVELILSEN-----PETPLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA + G+      +QSD   +++G FD+I SNPPYI    
Sbjct: 132 PDWQITASDLSRDALSLAAENAQSCGL--NLTLVQSDCLDAIQGKFDIIASNPPYISEED 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L + G   +EIGY Q   V  +F
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTEKGKIYLEIGYKQGDGVADLF 249

Query: 240 ES-RKLFLVNAFKDYGGNDRVL 260
                   +   KD  G DR++
Sbjct: 250 RQFFPQKRIRVLKDQFGKDRMV 271


>gi|313606724|gb|EFR83442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes FSL F2-208]
          Length = 277

 Score =  260 bits (665), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 19  AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 78

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 79  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 134

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 135 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 194

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 195 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 254

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 255 STVIIHKDINSKDRYV 270


>gi|58583267|ref|YP_202283.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625103|ref|YP_452475.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188575429|ref|YP_001912358.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58427861|gb|AAW76898.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369043|dbj|BAE70201.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519881|gb|ACD57826.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 281

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFEALVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TELLV+ AL     R++     R  DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTELLVELALE----RLDTSPGRRAADLGTGSGAIALAIASERPQSQLI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA  + +    D    +WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALGMARRNADRHSLP-NVDFRLGNWFAPLAGEAFDLIASNPPYIAAHDPHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +   
Sbjct: 200 GDLR-YEPASALASGNDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGDAVRALLAASGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                ++D    DRV L  +
Sbjct: 259 DAAATYQDLEARDRVTLGRK 278


>gi|332360649|gb|EGJ38458.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK49]
          Length = 276

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + +  + R  L     + L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNKLSFTDFVLKLRAEVSQKDRDQLKAIQEQLLVHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LVD  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVDLILSEN-----PETSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA ++G+      +QSD   +++  FD+IVSNPPYI    
Sbjct: 132 PDWQITASDLSGDALSLATENAQSSGL--NLVFVQSDCLDAIQRKFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   +  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGIRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           E       +   KD  G DR++
Sbjct: 250 EKNFPQKRIRVLKDQFGKDRMV 271


>gi|71900252|ref|ZP_00682389.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71729965|gb|EAO32059.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 275

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L          +    D  L           + +  +   +  ++G R F+ + +
Sbjct: 19  DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 79  IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL+IA  NA  +G++      + +W+ ++ G  FD+IVSNPPYI         
Sbjct: 135 ATDNSAAALDIAARNASAHGLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q   +  +  +  L
Sbjct: 194 GDLR-FEPPSALISGGDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV +  
Sbjct: 253 VAVATVQDLEARDRVTVGR 271


>gi|229588284|ref|YP_002870403.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
 gi|229360150|emb|CAY47007.1| protein methyltransferase [Pseudomonas fluorescens SBW25]
          Length = 276

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 76/250 (30%), Positives = 120/250 (48%), Gaps = 8/250 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G +   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKTRSYLHTWPEKIVSSEDALTFAGYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+TE      L  +   +      ++LDLGTG+GA+ LAL  E P ++   VD   +A+ 
Sbjct: 92  PDTE-----LLVEAALELLPATPAKVLDLGTGSGAIALALASERPAWQVTAVDRVLEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +      L S WFS++ G  +D+I+SNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLHL-NNVTVLNSHWFSALPGHTYDLIISNPPYIAANDPHLVAGDVR-FEPAS 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL   R I      HLN  G   +E GY+Q   V  +  S     V++  D G
Sbjct: 205 ALVAGHDGLDDLRLIIKEAPAHLNAGGRLLLEHGYDQAPAVRDLLLSEGFEEVHSRIDLG 264

Query: 255 GNDRVLLFCR 264
           G++R+ L  R
Sbjct: 265 GHERITLGRR 274


>gi|49476827|ref|YP_039321.1| HemK family modification methylase [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328383|gb|AAT59029.1| modification methylase, HemK family [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 283

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFIV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKDLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|160940108|ref|ZP_02087453.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436688|gb|EDP14455.1| hypothetical protein CLOBOL_04997 [Clostridium bolteae ATCC
           BAA-613]
          Length = 285

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 83/272 (30%), Positives = 128/272 (47%), Gaps = 14/272 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVL-----DDRQRFFLTNAIVRSLKHESIHRILG 56
               D+   L  V  L+    +      L      + +       I        +  + G
Sbjct: 19  DPQLDARYLLLEVFHLNLASFLALKARELGKDEETEGKCREFMRLIEARAGRTPLQHLTG 78

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            ++F      ++     PR +TE LV+  L     R +     R+LD+ TG+G + ++L 
Sbjct: 79  TQEFMGFEFLVNEHVLIPRQDTETLVELVLEEQNDREK-----RVLDMCTGSGCIAISLA 133

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEG--LFDVIVSNP 172
               +     +D+S +AL++A  N      G    F+  +S+ FS++E    FDVIVSNP
Sbjct: 134 LMGRYRHVAALDVSAEALKVAAGNRDRLLGGYEGGFELFESNMFSALETDRTFDVIVSNP 193

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S +++ L  EVRD +PRI+LDG  DGL+ YR +A+    HL + G   +EIGY+Q 
Sbjct: 194 PYIPSRVIEGLAPEVRDHEPRIALDGSDDGLTFYRILAEEARNHLAEGGSIYMEIGYDQS 253

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             V  +F S     V  F+D  G DRV+   R
Sbjct: 254 EAVEGLFRSGGYRDVRTFQDLAGQDRVVRARR 285


>gi|312622682|ref|YP_004024295.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203149|gb|ADQ46476.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 288

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L ++  +   +VI++    ++  +   + NAI + L+   +        F  + L 
Sbjct: 34  ALMMLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K     K   
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVFA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  R   ++S+ F  +     FD I+SNPPYI    +  L 
Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAIISNPPYISDEEIFELD 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P I+L    DGL  +R IA+    +L   G    E+G++Q   V  I +    
Sbjct: 209 PRVLK-EPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEILKKNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             +++ +D    +R +  
Sbjct: 268 KNISSRRDLNNVERCIFA 285


>gi|306820961|ref|ZP_07454581.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551075|gb|EFM39046.1| protein-(glutamine-N5) methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 279

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V       +  + D  +       +   + +   H+ IH I+G RDFY    
Sbjct: 23  DTELLLSFVLKKDRIYIKTNLDEKIALDDEQQIKLFVQQLKNHKPIHYIIGQRDFYGYDF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE+LV++A+     + +    +   ++G G+G + + LLK+       
Sbjct: 83  LVDEHVLIPRSDTEILVENAVNLLKNKKKDLKGL---EIGVGSGIISITLLKKLKNLSMT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+  A++I+K NA   GVS+R   ++SD F +V G +D I+SNPPYI+   +  L  
Sbjct: 140 AVDINDYAIDISKKNAENLGVSDRLKLIKSDLFENVIGKYDFIISNPPYIDEKDMADLPE 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL- 244
           +V++++P  +LDG  +G+  Y  I       LN       EIGYNQ   +   FE+    
Sbjct: 200 KVKNYEPYSALDGKKNGMYFYNEIIKSGRTFLNDKFHIFFEIGYNQGEMIRHSFENCGYE 259

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +DYG NDRV +
Sbjct: 260 ADVKIIQDYGKNDRVAI 276


>gi|206978498|ref|ZP_03239357.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus H3081.97]
 gi|206743288|gb|EDZ54736.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cereus H3081.97]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIDRHF-NDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++++AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIKVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|147679164|ref|YP_001213379.1| methylase of polypeptide chain release factors [Pelotomaculum
           thermopropionicum SI]
 gi|146275261|dbj|BAF61010.1| methylase of polypeptide chain release factors [Pelotomaculum
           thermopropionicum SI]
          Length = 300

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 12/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  VTGLS   +    + VL + +     + + R L  E +  + G ++F  
Sbjct: 35  PELDAEVLLAYVTGLSRAGLYRKKELVLTEEEEARFIDLVERRLAGEPVAYLTGHKEFMG 94

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETEL+V++AL F            I D+GTG+GAV ++L       
Sbjct: 95  LDFVVNRSVLIPRPETELMVETALKFL------PGAPVIADVGTGSGAVAVSLAFFVKEA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
                DIS +AL +A+ NA  +GV  R      D    + G       D+I +N PYI +
Sbjct: 149 VVYATDISREALAVARLNAARHGVEGRVHFCPGDLLEPLTGRVMPGSLDLIAANLPYIAT 208

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EVR F+P ++LDGG  GL+ YR +    +  L + G+  +EI   Q  ++  
Sbjct: 209 EDLPGLPREVRLFEPPVALDGGPGGLALYRRLIPAAAGFLKQGGIMLMEISPGQWAEMAG 268

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           +      +  +  KD  G DR++L  
Sbjct: 269 LL-QPPQWEASLLKDLAGLDRLVLAR 293


>gi|254853929|ref|ZP_05243277.1| modification methylase [Listeria monocytogenes FSL R2-503]
 gi|300764958|ref|ZP_07074946.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|258607317|gb|EEW19925.1| modification methylase [Listeria monocytogenes FSL R2-503]
 gi|300514258|gb|EFK41317.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|292490386|ref|YP_003525825.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
 gi|291578981|gb|ADE13438.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
          Length = 283

 Score =  260 bits (664), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 7/261 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             ++   L  +  +    +   P+  L   Q       + R  K E +  I G ++F+++
Sbjct: 25  RLEAELLLSYLLEVERSYLHAWPEQELTSVQWSCFEQLLQRRAKGEPLAYIRGRQEFWSL 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++  T  PRPETE LV+     ++ R+     ++I DLGTG+GA+ LA+  E P  +
Sbjct: 85  DLRVTEATLIPRPETEQLVEE----TIKRMALEQSLKIADLGTGSGAIALAIGSERPQAQ 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            +G DIS  AL +A+ N    G+ E     + DWF+ + G  FD++VSNPPYI       
Sbjct: 141 VIGADISAVALAVARENGSRLGL-ENVTFRRGDWFAPLRGERFDLLVSNPPYIAEGDPHL 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                 +F+P  +L  G  GL   R IA G   HL + G   +E GY+Q   ++ +  + 
Sbjct: 200 TQGG-LEFEPDTALIAGDRGLEAIRHIATGAREHLVEGGWLLLEHGYDQGPLLLELLTTL 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V  F D  G  RV++  
Sbjct: 259 GYRQVVDFCDLAGVPRVVVGQ 279


>gi|226525304|gb|ACO70903.1| protein-(glutamine-N5) methyltransferase release factor-specific
           [uncultured Verrucomicrobia bacterium]
          Length = 280

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 130/260 (50%), Gaps = 5/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +    L  V G    ++ ++ D  L D++   L + + +  + E +  +LG  +F  
Sbjct: 23  ARLNIEHLLAHVLGKRRMELYLEFDRPLGDQELNPLRDLVKKRAQGEPLQHLLGTAEFCG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
                      PRPETE L +  +A    R       RILD+GTG+G + L L    P  
Sbjct: 83  RTFGCDRRALVPRPETEQLCELVVAEFKKR--SVSPRRILDVGTGSGVIALTLAMTWPDA 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VD+S +AL +A+ NA   G+++R   ++SD F++VEG FD++V+N PYI+  ++  
Sbjct: 141 AMEAVDVSPEALTLARENAARLGLADRIRLVESDLFAAVEGEFDLVVANLPYIDQGVIPT 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  EV+  DPR +LDGG  G+  +       ++HL   G+ ++EIG++Q   V  +  + 
Sbjct: 201 VTREVQR-DPRTALDGGEGGMRVFERFIPAATQHLR--GMLALEIGHDQSDPVRALLAAH 257

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               +    DY G +R +  
Sbjct: 258 NYQDIRVVSDYQGRNRFVFA 277


>gi|16804580|ref|NP_466065.1| hypothetical protein lmo2542 [Listeria monocytogenes EGD-e]
 gi|224503218|ref|ZP_03671525.1| hypothetical protein LmonFR_11988 [Listeria monocytogenes FSL
           R2-561]
 gi|254831035|ref|ZP_05235690.1| hypothetical protein Lmon1_06733 [Listeria monocytogenes 10403S]
 gi|16412030|emb|CAD00620.1| lmo2542 [Listeria monocytogenes EGD-e]
          Length = 283

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 TTVVIHKDINSKDRYV 276


>gi|154491829|ref|ZP_02031455.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC
           43184]
 gi|154088070|gb|EDN87115.1| hypothetical protein PARMER_01450 [Parabacteroides merdae ATCC
           43184]
          Length = 291

 Score =  259 bits (663), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 14/264 (5%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              + RV  +  H  +   D  L + ++  + + + R  + E I  ILG  DFY+++  +
Sbjct: 35  RLIMERVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEV 94

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PRPETE LV+  +  +  +      ++ILD+GTG+G + + L K       +  
Sbjct: 95  DPSVLIPRPETEELVEQVILDNADQ-----KIKILDIGTGSGCIAVTLRKHLKKASVIAT 149

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD 181
           DIS +AL  A+ NA  N  +     +Q+D          +  + DVIVSNPPYI+     
Sbjct: 150 DISAEALATARRNAKRNNTT--VTFIQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKK 207

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P ++L     D L +Y  IA    + L ++G    EI       VV + E
Sbjct: 208 DMERNVLDYEPHLALFVPDNDPLLYYWHIAHFGKKKLRRNGHLYFEINAACGNMVVEMLE 267

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   +D  G DR++   +
Sbjct: 268 EEGYKNIELIQDLSGKDRIIKARK 291


>gi|24379521|ref|NP_721476.1| putative protoporphyrinogen oxidase [Streptococcus mutans UA159]
 gi|290580478|ref|YP_003484870.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025]
 gi|24377462|gb|AAN58782.1|AE014946_7 putative protoporphyrinogen oxidase [Streptococcus mutans UA159]
 gi|254997377|dbj|BAH87978.1| putative protoporphyrinogen oxidase [Streptococcus mutans NN2025]
          Length = 278

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 11/266 (4%)

Query: 1   MQALRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           ++AL +    L  V     G +    I+     + +     L   + +  +H     I G
Sbjct: 15  LEALGEEKESLAYVFKDCKGWNQTDFILQQPQEIAEADLTKLEEIMQQLRQHIPAQYITG 74

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              F ++ L++      PRPETE LV   L  +    + R   ++LD+GTG+GA+ LAL 
Sbjct: 75  KAYFADLILSVDERVLIPRPETEELVKLILKEN----QHRSSAKLLDIGTGSGAIALALA 130

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K  P ++    DIS  AL +A+ NA  N  +     LQSD FS +   +D+IVSNPPYI 
Sbjct: 131 KAQPDWQVWASDISEDALNLAQENATVNQAA--VTFLQSDIFSHISDKYDIIVSNPPYIS 188

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               D +   V   +P ++L    DGL+ Y+ +A     +L   G   +EIGY Q   V 
Sbjct: 189 LRDQDEVEQNVLAHEPHLALFADNDGLAFYQKLALEAEHYLKLTGKIYLEIGYKQGEAVS 248

Query: 237 RIFE-SRKLFLVNAFKDYGGNDRVLL 261
           ++FE       V   +D  G DR+++
Sbjct: 249 QLFERQFPNKRVRLLQDSFGKDRMVV 274


>gi|329897170|ref|ZP_08271910.1| HemK family modification methylase [gamma proteobacterium IMCC3088]
 gi|328921325|gb|EGG28719.1| HemK family modification methylase [gamma proteobacterium IMCC3088]
          Length = 275

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++H  L +V+GL    +   P+  L  R        + R      +  +LG R+FY 
Sbjct: 19  ANLEAHLLLEQVSGLERTTLFAWPERELAPRVVQQYRALVDRRASGVPVAYLLGRREFYG 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETELLVD AL  +L          +LDLGTG+GA+ LAL  + P +
Sbjct: 79  LDLHVDQRVLIPRPETELLVDVALGLALDV-----KAEVLDLGTGSGAIALALASQRPQW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
               VD S  AL++A +N    G+    D   SDWF+S+    FD+IVSNPPY+E     
Sbjct: 134 SICAVDRSEDALDVATANQENLGIK-NIDFYCSDWFASLPQYQFDLIVSNPPYVEPDSAY 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+P  +L     GL+    I D   ++L   G   +E GY Q   + + F  
Sbjct: 193 LQQGDVR-FEPIKALVAPNAGLADLFAIIDQAPKYLKSGGTLWLEHGYQQAERLRQRFID 251

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                     D  G DRV 
Sbjct: 252 LGYQGAQTHCDLQGLDRVT 270


>gi|229064979|ref|ZP_04200277.1| Protein hemK [Bacillus cereus AH603]
 gi|228716280|gb|EEL67992.1| Protein hemK [Bacillus cereus AH603]
          Length = 283

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 RAQVEVVFDINGKDRMVFA 280


>gi|222098800|ref|YP_002532858.1| modification methylase, hemk family [Bacillus cereus Q1]
 gi|221242859|gb|ACM15569.1| modification methylase, HemK family [Bacillus cereus Q1]
          Length = 283

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIDRHF-NDEKLHVADIGTGSGAISITLSLENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++++AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIKVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|307244043|ref|ZP_07526162.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492567|gb|EFM64601.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptostreptococcus stomatis DSM 17678]
          Length = 300

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 19/280 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D    LC + G    +++++    LD  +     + I + L    I  I+  ++F  
Sbjct: 21  ARLDVEIILCHILGWDRVKLMINYGQDLDSDKMSIFEDMIAKRLDQMPIAYIINKKEFMG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   +      PRP+TELLV+  +     +   ++   + +LD+ TG+GA+ L+      
Sbjct: 81  LDFYVDERVLIPRPDTELLVEDLVESIGEMESTKQARDINVLDMCTGSGAIILSGASLWK 140

Query: 121 F-------------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGL 164
                            +GVDIS  ALE+A  N  + G+ +    ++SD F+++    G 
Sbjct: 141 DRAKEDSGKAKDGTVNFIGVDISKSALEVATINRKSFGL-DTVKLIESDLFTNLGDYRGC 199

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D+IVSNPPYIE  +++ L  +V+D++PR++L GG DG+  Y  I +    +L   G   
Sbjct: 200 LDIIVSNPPYIEDQVIEGLERDVKDYEPRLALAGGNDGMDFYNRIIEDAYDYLKLGGKLV 259

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            E G++Q   +++             KD  G DR++   +
Sbjct: 260 FESGHDQAEKILKKMAQVGYTKAYTKKDIQGFDRLVAAYK 299


>gi|319945453|ref|ZP_08019713.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599]
 gi|319741239|gb|EFV93666.1| protein methyltransferase HemK [Lautropia mirabilis ATCC 51599]
          Length = 297

 Score =  259 bits (663), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 117/261 (44%), Gaps = 6/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  +TG      +   D   D            R    E +  +LG ++FY 
Sbjct: 28  PRAEARRLLACLTGQPLTWFMAHGDDPADPDIAARFQALAERRRAGEPLAYLLGQQEFYG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               +S     PR +TE LV++AL     L +  +   + +L+LGTG+G + + L  E+P
Sbjct: 88  RPFAVSPAVLIPRADTETLVETALEQLTLLRQQRRAVPLSLLELGTGSGIIAITLALEAP 147

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
             +   V+ S +AL +A+ NA   G ++R       W+ ++     FD+IVSNPPYI + 
Sbjct: 148 DTEVHAVERSPEALAMAQQNAKALG-ADRIHWHAGSWWQALASPRHFDLIVSNPPYIAAG 206

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L  G DGL   R I  G   HL+  G   +E GY+Q+  V  +
Sbjct: 207 DHHLQQGDLR-FEPPQALAAGPDGLDDLRIIIGGAPAHLSPGGWLLLEHGYDQEAPVQAL 265

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
                   V   +D  G  RV
Sbjct: 266 LRDAGFAEVFTRRDLAGQPRV 286


>gi|262038063|ref|ZP_06011468.1| methyltransferase [Leptotrichia goodfellowii F0264]
 gi|261747883|gb|EEY35317.1| methyltransferase [Leptotrichia goodfellowii F0264]
          Length = 367

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 5/265 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
           +A   +      V  +    +       LD  +   + N I +  K +  +  +L  ++F
Sbjct: 103 EAKLIAEIIFSHVLEIDRMLLFTKYKENLDKEKTDKIRNFIQKVGKEKFPVQYLLNEQEF 162

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  +  +++    PR +TE+LV+ A+     R EK +  +ILD+GTG+GA+ + L  E P
Sbjct: 163 YGRKFYVNTGVLIPRQDTEVLVEEAIKTL--RSEKTETPKILDIGTGSGAIGITLALEIP 220

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             K +G DIS KALEI++ N  +   +E     +SD F ++E   FD+I+SNPPYI S  
Sbjct: 221 DSKIMGTDISDKALEISEKN-KSLLNAENIKFFKSDLFENIEYKKFDMIISNPPYIASDE 279

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  +    +P  +L    +GL  YR I+     +L   G    E GY Q   V +I 
Sbjct: 280 TKVMSEDTLLHEPDEALFAEDEGLYFYREISFQGKEYLRNGGYMLFETGYKQAETVKKIM 339

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E      VN  KD     RV+   +
Sbjct: 340 EITGYKNVNIIKDMQNIGRVVTGQK 364


>gi|118588513|ref|ZP_01545922.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
 gi|118439219|gb|EAV45851.1| protoporphyrinogen oxidase [Stappia aggregata IAM 12614]
          Length = 282

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 137/262 (52%), Gaps = 6/262 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +    GL    ++                    + L+   + RILG R+FY  R
Sbjct: 24  LDARLLVSAALGLPLSDLVFREHEEAAPEAAGLAEAYAQKRLEGMPVGRILGEREFYGRR 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             L+  T EPRP+TE L+D+ L     R    +   + D+GTGTGA+ + LL E P  + 
Sbjct: 84  FLLNPATLEPRPDTETLIDAVLE----RCTADEAPVMCDIGTGTGAIAVTLLAELPRSRM 139

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDC 182
           + VD+S +ALE A SNA  +GV +R  T+++D+ S++  EG FD +VSNPPYI + ++  
Sbjct: 140 IAVDLSEQALECAASNAALHGVGDRLLTVRADYTSALRPEGGFDWVVSNPPYIRTAVLAE 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   DP+++LDGG DGL+ Y  I     + L   G  ++EIG++Q  D+ +     
Sbjct: 200 LSREVIQHDPKLALDGGEDGLTAYVRILTDAEKLLRPGGRIALEIGFDQGADLKKQLRHH 259

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +   KD  GNDRV+   R
Sbjct: 260 GFVEIEIIKDLSGNDRVVAARR 281


>gi|55822720|ref|YP_141161.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066]
 gi|55738705|gb|AAV62346.1| protoporphyrinogen oxidase [Streptococcus thermophilus CNRZ1066]
          Length = 277

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +   +   H+    ILG+ +F+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDGNLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         +++LD+GTG+GA+ ++L K  P ++    D+S  AL +
Sbjct: 94  ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA  N V      + +D F +V G FD+IVSNPPYI     D +GL V   +P+++L
Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DGL+ YR I +   ++LN  G    EIGY Q  D+ ++         V   KD  G
Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|229199454|ref|ZP_04326117.1| Protein hemK [Bacillus cereus m1293]
 gi|228584030|gb|EEK42185.1| Protein hemK [Bacillus cereus m1293]
          Length = 283

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQEKSFAEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHMYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|116749149|ref|YP_845836.1| HemK family modification methylase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698213|gb|ABK17401.1| modification methylase, HemK family [Syntrophobacter fumaroxidans
           MPOB]
          Length = 288

 Score =  259 bits (662), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 124/266 (46%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           Q   ++   L  V      Q+ +  D  L   +      AI R    E    I G ++F+
Sbjct: 26  QPRANAEVLLAHVLDTERIQLYLRYDQPLGSAELARYREAIRRRASCEPTQYITGRQEFW 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +      PRPETE+LV+ AL      +      R+LD+GTG+GA+ ++L  E   
Sbjct: 86  SLELEVGPAVLIPRPETEVLVEKALE-----LLPGTRARVLDIGTGSGAIAVSLATERKD 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
              V  D S  ALEIA+ NAV + V +R      D FS+      +FD+IV+NPPYI   
Sbjct: 141 LTVVATDRSPGALEIARRNAVRHKVEDRVWLAAMDLFSAFLPAVPVFDLIVANPPYIGDF 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  E+ + +P  +L GG+DGL   R I       L   G   +EIG  Q   +  +
Sbjct: 201 EFAALPREIAEHEPVEALRGGVDGLDVIRKILAEAPFFLKPGGSLLIEIGKGQDEMLPLV 260

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++ ++      +DY G  RV+  CR
Sbjct: 261 PDNSRIDTCGFIRDYSGVLRVMH-CR 285


>gi|116627621|ref|YP_820240.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMD-9]
 gi|116100898|gb|ABJ66044.1| Methylase of polypeptide chain release factor [Streptococcus
           thermophilus LMD-9]
 gi|312278143|gb|ADQ62800.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus thermophilus ND03]
          Length = 277

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +   +   H+    ILG+ +F+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDGNLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         +++LD+GTG+GA+ ++L K  P ++    D+S  AL +
Sbjct: 94  ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA  N V      + +D F +V G FD+IVSNPPYI     D +GL V   +P+++L
Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DGL+ YR I +   ++LN  G    EIGY Q  D+ ++         V   KD  G
Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|47096964|ref|ZP_00234540.1| modification methylase, HemK family [Listeria monocytogenes str.
           1/2a F6854]
 gi|254828118|ref|ZP_05232805.1| modification methylase [Listeria monocytogenes FSL N3-165]
 gi|254900319|ref|ZP_05260243.1| hypothetical protein LmonJ_10912 [Listeria monocytogenes J0161]
 gi|254913442|ref|ZP_05263454.1| modification methylase [Listeria monocytogenes J2818]
 gi|254937823|ref|ZP_05269520.1| modification methylase [Listeria monocytogenes F6900]
 gi|284802980|ref|YP_003414845.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578]
 gi|284996121|ref|YP_003417889.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923]
 gi|47014674|gb|EAL05631.1| modification methylase, HemK family [Listeria monocytogenes str.
           1/2a F6854]
 gi|258600503|gb|EEW13828.1| modification methylase [Listeria monocytogenes FSL N3-165]
 gi|258610427|gb|EEW23035.1| modification methylase [Listeria monocytogenes F6900]
 gi|284058542|gb|ADB69483.1| hypothetical protein LM5578_2737 [Listeria monocytogenes 08-5578]
 gi|284061588|gb|ADB72527.1| hypothetical protein LM5923_2686 [Listeria monocytogenes 08-5923]
 gi|293591449|gb|EFF99783.1| modification methylase [Listeria monocytogenes J2818]
          Length = 283

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 TTVVIHKDINSKDRYV 276


>gi|56697311|ref|YP_167677.1| HemK family modification methylase [Ruegeria pomeroyi DSS-3]
 gi|56679048|gb|AAV95714.1| modification methylase, HemK family [Ruegeria pomeroyi DSS-3]
          Length = 271

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 130/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     L           I        +  ++G RDFY
Sbjct: 15  DPARDARLLLAHAARIEASRVTLIAPEDLAPEIAERYDQLISLRAVRVPVSHLVGERDFY 74

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S +  +PRPETE L+++AL              +LDLG G+GA+ + LL E P 
Sbjct: 75  GRRFKVSGEVLDPRPETETLIEAAL--------NAPFEHVLDLGVGSGAILVTLLAERPS 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  A   A +NAV + V  R D  +SDWF +VEG FD+IVSNPPYI    ++
Sbjct: 127 ATGLGVDLSEAACLQASANAVLHRVEARADIRRSDWFGAVEGRFDLIVSNPPYIALSEME 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGL  YR IA G   +L   G   VEIG  Q   V R+F++
Sbjct: 187 ALAPEVRRHEPELALTDGGDGLGAYRHIAAGAPDYLLPGGRLLVEIGPTQAQAVSRLFQA 246

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  +    D  G DRV+
Sbjct: 247 AGLSGLRVIPDLDGRDRVV 265


>gi|223932123|ref|ZP_03624127.1| modification methylase, HemK family [Streptococcus suis 89/1591]
 gi|302023744|ref|ZP_07248955.1| methyltransferase [Streptococcus suis 05HAS68]
 gi|330832777|ref|YP_004401602.1| modification methylase, HemK family [Streptococcus suis ST3]
 gi|223899104|gb|EEF65461.1| modification methylase, HemK family [Streptococcus suis 89/1591]
 gi|329307000|gb|AEB81416.1| modification methylase, HemK family [Streptococcus suis ST3]
          Length = 277

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+  + ++     +    +  +     +  +H     I+G  DF+ +   +      PR
Sbjct: 33  GLNFTEFLLLLRQEVTPTDKEEIDAIFQQLSQHRPAQYIIGKADFHGLEFAVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L  +         +RILD+GTG+GA+ ++L K    ++ V VDIS  AL 
Sbjct: 93  PETEELVNLILQEN-----SGAGLRILDIGTGSGAIAISLAKARSDWEVVAVDISKDALA 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ NA TN VS     L+SD F +V G FD+IVSNPPYI     D +GL V   +P ++
Sbjct: 148 VAQENARTNQVS--VHFLESDVFQAVTGQFDLIVSNPPYISPDDTDEVGLNVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG++ YR IA+     L + G    EIGY Q  D+  +         +   KD  
Sbjct: 206 LFAEEDGMAIYRQIAEQAGAFLKEKGKLYFEIGYKQGQDLTDLLALHFPKKRIRVLKDQF 265

Query: 255 GNDRVLLF 262
           G DR ++ 
Sbjct: 266 GQDRKVIA 273


>gi|325689727|gb|EGD31731.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK115]
          Length = 276

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 123/264 (46%), Gaps = 11/264 (4%)

Query: 1   MQALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           + A  ++ +   + R    LS    ++   + +       L     + L H+    I+G 
Sbjct: 15  LAAGEEAENLSFVYRALNELSFTDFVLKLRTEVSQEDHKQLKAIQEQLLAHKPAQYIIGS 74

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            DF+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ L L  
Sbjct: 75  SDFHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALTLAN 129

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P ++    D+S  AL +A  NA           +QSD   +++G FD+IVSNPPYI  
Sbjct: 130 SRPDWQITASDLSNDALALAAENAQ--FCRLNLAFVQSDCLDAIQGKFDIIVSNPPYISE 187

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              D +GL V   +P ++L    DG + YR IA+    +L K G   +EIGY Q   V  
Sbjct: 188 ADKDEVGLNVLTSEPHMALFAEEDGYAVYRKIAEQAGDYLTKKGKIYLEIGYKQGDGVAD 247

Query: 238 IFESR-KLFLVNAFKDYGGNDRVL 260
           + +       +   KD  G DR++
Sbjct: 248 LLKKSFPQKRIRVLKDQFGKDRMV 271


>gi|288942096|ref|YP_003444336.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Allochromatium vinosum DSM 180]
 gi|288897468|gb|ADC63304.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Allochromatium vinosum DSM 180]
          Length = 293

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 94/249 (37%), Positives = 129/249 (51%), Gaps = 7/249 (2%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
           TG +   ++  P+    D         + R L  E I  I G ++F+ + L ++ DT  P
Sbjct: 45  TGWTRTSLLAWPERAPPDEAVATFEALLARRLTGEPIAYIRGRQEFWTLELRVTPDTLIP 104

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+ AL     R++ +  +RI DLGTG+GA+  AL  E P +  V  D S  AL
Sbjct: 105 RPETEQLVELALD----RLDAQRPLRIADLGTGSGAIAAALASERPDWSLVATDRSAAAL 160

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A+ N  T G+ ER   L+ DW +++  G  D I+SNPPY+          + R F+PR
Sbjct: 161 AVARDNFRTLGL-ERIGCLRMDWLAALASGSLDAILSNPPYVAGQDPHLDRGDPR-FEPR 218

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L  G DGL   RTIA    R L   GL +VE G++Q   V RIF S  L  V   +D 
Sbjct: 219 SALTPGGDGLDAIRTIAAETGRCLRPGGLLAVEHGFDQGDAVRRIFASAGLHRVETCRDL 278

Query: 254 GGNDRVLLF 262
            G DRV L 
Sbjct: 279 AGLDRVTLG 287


>gi|71274722|ref|ZP_00651010.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71899597|ref|ZP_00681752.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71164454|gb|EAO14168.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71730639|gb|EAO32715.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 275

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L          +    D  L           + +  +   +  ++G R F+ + +
Sbjct: 19  DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 79  IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL+IA  NA  + ++      + +W+ ++ G  FD+IVSNPPYI         
Sbjct: 135 ATDNSAAALDIAARNASAHRLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDPHLTQ 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q   +  +  +  L
Sbjct: 194 GDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV +  
Sbjct: 253 VAVATVQDLEARDRVTVGR 271


>gi|313622329|gb|EFR92816.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria innocua FSL J1-023]
          Length = 283

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL+  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV +A AF    ++K  +  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELVATAEAF----LKKHPLRSLLDVCTGSGIIAIALKKAFPDITVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK NA+      RF   D L+S  F      FD+IV+NPPYI       +
Sbjct: 141 SDISAAALAIAKKNALLLNADVRFIETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S 
Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHATVLIHKDINSKDRYV 276


>gi|254472106|ref|ZP_05085506.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudovibrio sp. JE062]
 gi|211958389|gb|EEA93589.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudovibrio sp. JE062]
          Length = 294

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 135/260 (51%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+        G+    ++++ D  +       +T      L  + + RILG R+F+
Sbjct: 31  EADLDARVLTAEALGIEPRNLVLEYDREISPEVIAVMTRYAEERLAGKPVGRILGKREFW 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  +LS  T EPRP+TE LV++ LAF              D+GTGTGA+ +ALL E P 
Sbjct: 91  GLEFSLSQATLEPRPDTETLVEATLAFCQANGGFDKPWVFADIGTGTGAIAIALLSELPN 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V VDIS +ALE A+ NA  NG   RF  ++  +  ++ G FD +VSNPPYI S +++
Sbjct: 151 AICVAVDISEEALETARQNAANNGFESRFIPVRGSYLDALNGAFDFVVSNPPYIRSAVIE 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  DP ++LDGG DGL+ Y+ +       L ++    +EIG++Q  ++  +   
Sbjct: 211 GLSHEVKQHDPMLALDGGDDGLTAYKELIGNAKLVLKRNSGLLMEIGFDQAEELSTLARE 270

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
                V    D  G  RV++
Sbjct: 271 LVGLEVRCEHDLAGQPRVIV 290


>gi|55820817|ref|YP_139259.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311]
 gi|55736802|gb|AAV60444.1| protoporphyrinogen oxidase [Streptococcus thermophilus LMG 18311]
          Length = 277

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                 ++     + +     L +   +   H+    ILG+ +F+ +R  +      PRP
Sbjct: 34  WDLTHFVLQLRQEVSEEDGDLLAHIFTQLTAHKPAQYILGYEEFHGLRFQVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         +++LD+GTG+GA+ ++L K  P ++    D+S  AL +
Sbjct: 94  ETEELVDLILAEN-----PNTELKVLDIGTGSGAIAVSLKKSRPMWQVTASDLSADALVL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA  N V      + +D F +V G FD+IVSNPPYI     D +GL V   +P+++L
Sbjct: 149 AKDNAKLNRVD--ISFVLADVFENVSGCFDIIVSNPPYISENDKDEVGLNVLTSEPKMAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DGL+ YR I +   ++LN  G    EIGY Q  D+ ++         V   KD  G
Sbjct: 207 FADEDGLAIYRQILEDADKYLNPQGKLYFEIGYKQGEDLRKLLSLHFPDKHVRVLKDQFG 266

Query: 256 NDRVLLF 262
            DR+++ 
Sbjct: 267 QDRMVVM 273


>gi|319760482|ref|YP_004124420.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039196|gb|ADV33746.1| protein methyltransferase HemK [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 281

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 8/262 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   L +VT  S  Q++   ++ L  +Q   L   I R  + E I  I+G ++F
Sbjct: 19  LSPKLDAELLLQKVTRKSKIQLLTFGETNLSFKQIQTLQLLINRRSQGEPIAHIIGVKEF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++   +S   F PRP+TE L++  L  +       D V ILDLGTG G + L L  E P
Sbjct: 79  WSLNFKVSPGVFIPRPDTECLIEQILNLNF----NSDNVEILDLGTGVGTIALTLASERP 134

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
            +   G++   +AL +A  N       +  + +  +WF  ++    FD+IVSNPPYI   
Sbjct: 135 SWNITGIEQQKQALSLAHKN-KLLLDCKNVNFIYGNWFKYLKNSKKFDLIVSNPPYINKK 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  +V  F+PR +L     GLS    I      +L   G   +E G+NQ   V  +
Sbjct: 194 DLHWLSKDVY-FEPRNALISKNSGLSDLMIICQYSKYYLCPSGWIFLEHGWNQGKQVRNL 252

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
              ++   +    DY   +R+ 
Sbjct: 253 LSKQQFINICTKFDYNNCERIT 274


>gi|229187554|ref|ZP_04314694.1| Protein hemK [Bacillus cereus BGSC 6E1]
 gi|228595921|gb|EEK53601.1| Protein hemK [Bacillus cereus BGSC 6E1]
          Length = 283

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q    T  I + ++   I  ++G   FY     +
Sbjct: 25  EIVLCHVLKTNRTGLLMNMREEITAEQETSFTEFIHKHVEGIPIQYMIGHEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + + D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHF-GDEKLHVADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D    F       DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAE--VTFYHGDLLLPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 PVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 HAHVEVVFDINGKDRMVFA 280


>gi|116511388|ref|YP_808604.1| methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116107042|gb|ABJ72182.1| Methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. cremoris SK11]
          Length = 271

 Score =  258 bits (661), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 10/239 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             + D++   LT    R +K+E    I+GW +FY ++  +      PRPETE LV+  L 
Sbjct: 41  EKITDQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILT 100

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +       D ++ILD+GTG+GA+ ++L K    +     DIS  ALE+A  NA  N V 
Sbjct: 101 EN-----NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHV- 154

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+
Sbjct: 155 -NLEFIQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAQNQGLAIYQ 213

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVLLFCR 264
            IAD    HL  DG   +EIGY Q   V  IF+  K     V+  +D  G DR++   R
Sbjct: 214 KIADQAVNHLTDDGKIYLEIGYKQGKAVQAIFQE-KFTDRLVSIHQDIFGKDRMISVKR 271


>gi|227510127|ref|ZP_03940176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
 gi|227190332|gb|EEI70399.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus brevis subsp. gravesensis ATCC 27305]
          Length = 288

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    + +  G S+  +++     +   Q     N + R +  E +  I+G  DFY + L
Sbjct: 30  DIDFLIQKRFGFSTTDMLIHYHDRMSSGQWLQFQNDVKRLISGEPVQYIVGQADFYGLTL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + S+   PR ETE LVD  L  +   +     +++LD+GTG+GA+ +AL    P ++  
Sbjct: 90  NVDSNVLIPRVETEELVDWILDQT--TVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVN 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL++A+ NA  + V+  F  + SD F+ +   FD+IVSNPPYI +  V  +  
Sbjct: 148 ASDISDSALKVAQQNAQLHHVAINF--ILSDIFAHINEAFDLIVSNPPYISASEVGDMDS 205

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244
            V++ +P+I+L    DGL+ Y+++A GV  HLN  G   VEIG++Q+  V +IF E+   
Sbjct: 206 SVKNNEPKIALFAADDGLAIYKSLAKGVDAHLNAGGQLFVEIGFHQEASVRKIFQEALPN 265

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
            +V A  D  G+ R++   +
Sbjct: 266 AIVTAKHDVSGHQRMVQLRK 285


>gi|251799801|ref|YP_003014532.1| modification methylase, HemK family [Paenibacillus sp. JDR-2]
 gi|247547427|gb|ACT04446.1| modification methylase, HemK family [Paenibacillus sp. JDR-2]
          Length = 283

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 16/280 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M+   ++   L  V G+    ++ D                I R    E +  I+G   F
Sbjct: 1   MEPRSNAERLLLHVLGIDRSTMLRDFGEPFPAAHAAEWVELIRRKAAGEPVQYIIGEEWF 60

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y    T++  T  PRPETELLV++ L  +  L   +  +V  ++D+GTGTGA+ + L  +
Sbjct: 61  YGRPFTVTPATLIPRPETELLVEAVLEAADKLWPPDGAEVPTVVDVGTGTGAIGVTLASQ 120

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------EGLF 165
            P ++    D+S  AL +A++NA  +  + R   +Q D  +               +   
Sbjct: 121 RPRWRVSASDLSPDALAVARTNAARHEAAGRMAFVQGDLLAPFAKRGAAGAALDAEDIRI 180

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DV+VSNPPYI +  +  L  EVRD++PR++LDGG DGL  YR +   +        + + 
Sbjct: 181 DVLVSNPPYIPADDLPGLQPEVRDYEPRLALDGGADGLDPYRRMVGQLPSLAQLPRIVAF 240

Query: 226 EIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           E+G  Q  DV  +  +      +    DYGG +R ++  R
Sbjct: 241 ELGMGQARDVAALLRNVGEWDDIRIITDYGGIERHVIAVR 280


>gi|149197696|ref|ZP_01874746.1| Methyltransferase [Lentisphaera araneosa HTCC2155]
 gi|149139266|gb|EDM27669.1| Methyltransferase [Lentisphaera araneosa HTCC2155]
          Length = 282

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 10/261 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +     +    + +  D  L + +   +   + R  +HE +  I G  +FY + ++
Sbjct: 27  AEWIISDSLNIKRLDLYLQHDRPLSESELSSIREKLQRCARHEPVQYICGSTNFYGLEIS 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGV 125
           +      PRPETE LVD A          ++  ++LDL TG+G + +A+ ++       V
Sbjct: 87  VGPGVLIPRPETECLVDLATKHI------KEGQKLLDLCTGSGCIPIAIQEQKKQSLSIV 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCL 183
             DI  KAL  A+ N   N  ++  + LQ D F+ +  +  FD+I SNPPY+       +
Sbjct: 141 ACDIEEKALNYAQENITQNK-TQNIELLQCDLFAKIANDIKFDLITSNPPYVSESERPEM 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           G +V   +P  +L    DG++    IA    +++       +EIG +Q    + +FE+  
Sbjct: 200 GKDVLKHEPPSALFADHDGMAIIERIAQEAPQYMEPKAYILIEIGASQGSRCLELFEASN 259

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KDY   DR+L   R
Sbjct: 260 YRNVEVVKDYSSRDRILKAQR 280


>gi|145220120|ref|YP_001130829.1| HemK family modification methylase [Prosthecochloris vibrioformis
           DSM 265]
 gi|145206284|gb|ABP37327.1| modification methylase, HemK family [Chlorobium phaeovibrioides DSM
           265]
          Length = 294

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L +V GL   ++ ++    +   +         + L+   +  I G + FY
Sbjct: 29  EARIGAEMLLSQVLGLKRIELYLNYQRPVYPDELERFRRLCRQRLEGRPVQYIAGEQFFY 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  +      PRPETELLV+ AL F    +E     R++D+GTG+G + + +   +  
Sbjct: 89  GLQFHVDERVLIPRPETELLVEHALGF----LENTQSARVMDIGTGSGCIAVTMALRNAS 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYI 175
                +D S +AL +A+ NA+ + V +R    ++D F          G + +IVSNPPYI
Sbjct: 145 LVLDALDCSVEALAVARGNALAHKVQDRVRFHEADIFRDSFTAPFSAGTYSLIVSNPPYI 204

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                + L  EVR+++PR++L     G+  YR IA      L  +G+   E+       V
Sbjct: 205 PDAEWELLQREVREYEPRLALTT-PTGMECYRAIAGHAGELLKPEGVLCFEVHAEGAAAV 263

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVL 260
             I +S     +   KDY G DR++
Sbjct: 264 GAIMDSSGFSAITVTKDYSGLDRIV 288


>gi|148988473|ref|ZP_01819920.1| HemK protein [Streptococcus pneumoniae SP6-BS73]
 gi|147926154|gb|EDK77228.1| HemK protein [Streptococcus pneumoniae SP6-BS73]
          Length = 279

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPDWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASNQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           ++    DGL+ Y  IA+    +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 AIFADEDGLAIYCRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G +R+++
Sbjct: 266 FGQNRMVV 273


>gi|304394128|ref|ZP_07376051.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ahrensia sp. R2A130]
 gi|303293568|gb|EFL87945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ahrensia sp. R2A130]
          Length = 283

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 96/257 (37%), Positives = 131/257 (50%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + + +  VTG  +  V+V  D   +        N + +      + R +G R+F+ +   
Sbjct: 30  ARAIMAHVTGDDAGMVMVREDVAFNAADAAVFQNLVQKVASGTPLFRAIGVREFHGLDFA 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           LS DT EPR +TE L+++ L+ S P        R  DLGTG+G V ++LL E      V 
Sbjct: 90  LSKDTLEPRDDTEALIEAVLSQSPPAKS-----RFSDLGTGSGIVAISLLHELSEATAVA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL+ A +NA  NGV ER  T Q  W   +EG FD +VSNPPYI S IVD L   
Sbjct: 145 TDISAGALQTATANAARNGVGERLSTAQGSWCEPLEGAFDFMVSNPPYIASDIVDGLDQS 204

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V D DPR +LDGG  GL  YR I       L   G  ++EIGY+Q   V  + +      
Sbjct: 205 VLDHDPRRALDGGETGLEAYREILSQAGSLLRPGGFLALEIGYDQAEAVTALAQQTGWRR 264

Query: 247 VNAFKDYGGNDRVLLFC 263
           +  + D  G+DR L+F 
Sbjct: 265 LALYHDLQGHDRALVFA 281


>gi|170730036|ref|YP_001775469.1| protoporphyrinogen oxidase [Xylella fastidiosa M12]
 gi|167964829|gb|ACA11839.1| protoporphyrinogen oxidase [Xylella fastidiosa M12]
          Length = 275

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L          +    D  L           + +  +   +  ++G R F+ + +
Sbjct: 19  DAEALLLYALDCDRAWLFTHGDIPLAAAATESFQALVEQRARGIPVAYLIGRRGFWTLDV 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +SS T  PR ETE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 79  IVSSATLIPRAETETLVEQAL----QRLDHASERRVADLGTGSGAIALAIACERPQAQVL 134

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL+IA  NA  + ++      + +W+ ++ G  FD+IVSNPPYI    +    
Sbjct: 135 ATDNSAAALDIAARNASAHRLNH-VVFREGNWYEALLGERFDLIVSNPPYIAVTDLHLTQ 193

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+P  +L  G DGL   R +A G   HL   G   +E G++Q   +  +  +  L
Sbjct: 194 GDLR-FEPPSALISGSDGLDALRILAAGAPAHLRPGGWLVLEHGWDQGAAMRTLLHTAGL 252

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV +  
Sbjct: 253 VAVATVQDLEARDRVTVGR 271


>gi|167582489|ref|ZP_02375363.1| hemK protein [Burkholderia thailandensis TXDOH]
          Length = 285

 Score =  258 bits (661), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD            R    E + ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFGLEF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++    P  +  
Sbjct: 84  DVTPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASVRPDARVW 139

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI    
Sbjct: 140 ALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHD 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  + 
Sbjct: 200 PHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALL 258

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+     V +  D    +R  
Sbjct: 259 EAAGFADVESLADLASIERAT 279


>gi|300172697|ref|YP_003771862.1| protein methyltransferase prmC [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887075|emb|CBL91043.1| Protein methyltransferase prmC [Leuconostoc gasicomitatum LMG
           18811]
          Length = 335

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 129/264 (48%), Gaps = 9/264 (3%)

Query: 3   ALRDSH----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
              D+       L     ++   +  +    +           + + + +E +  ILG  
Sbjct: 70  PKEDAQDNVDFLLSGALNINYAYLRANITRTMPSDLAAIWPKWLAKLMNNEPVQYILGHA 129

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     + S    PRPETE LV+  L  +    +    V +LD+GTGTGA+   L+ E
Sbjct: 130 PFYGREFMVDSRVLIPRPETEQLVEWILKDAGS--KNGKPVSVLDIGTGTGAIIETLMLE 187

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +P  +G   DIS  AL +A+ NA   G+      +QSD +S+VEGL FD+IVSNPPYI +
Sbjct: 188 NPRVRGFAADISSGALAVAEMNAQRFGL-NYLHLVQSDVYSAVEGLEFDIIVSNPPYIAT 246

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              D +   V +++P  +L    DGL+ Y  IA  ++ +L+ +G    EIGY Q   VV 
Sbjct: 247 TDEDEMADNVLEYEPHTALFADHDGLAIYEKIAADLALYLSDNGRAYFEIGYKQGQQVVS 306

Query: 238 IFE-SRKLFLVNAFKDYGGNDRVL 260
           + + +     V   KD+ G DR++
Sbjct: 307 MMQHALPQAEVTLKKDFSGLDRMV 330


>gi|168491916|ref|ZP_02716059.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC0288-04]
 gi|183573762|gb|EDT94290.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pneumoniae CDC0288-04]
          Length = 279

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLD-DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            LS    I      +  + ++ F+ +   +   H+    I+G  DFY + L +      P
Sbjct: 33  NLSFTDFIFALQQEVTTEEEKQFVEDIYQQLAAHKPAQYIIGQADFYGMHLKVDERVLIP 92

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L  +L        + +LD+GTG+GA+ LAL K  P +     D+S +AL
Sbjct: 93  RPETEELVELILTENLET-----NLSVLDIGTGSGAIALALAKNRPAWSVTAADVSQEAL 147

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P +
Sbjct: 148 ELASENASDQNL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHL 205

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    DGL+ Y  IA+  + +L   G   +EIGY Q   V  +F        V   KD 
Sbjct: 206 ALFADEDGLAIYCRIAEDATDYLKDSGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQ 265

Query: 254 GGNDRVLL 261
            G DR+++
Sbjct: 266 FGQDRMVV 273


>gi|229170036|ref|ZP_04297728.1| Protein hemK [Bacillus cereus AH621]
 gi|228613461|gb|EEK70594.1| Protein hemK [Bacillus cereus AH621]
          Length = 283

 Score =  258 bits (660), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITAEQEKSFEEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 RAQVEVVFDINGKDRMVFA 280


>gi|125623425|ref|YP_001031908.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492233|emb|CAL97162.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070172|gb|ADJ59572.1| putative protoporphyrinogen oxidase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 270

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 120/235 (51%), Gaps = 10/235 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             + D++   LT    R +K+E    I+GW +FY ++  +      PRPETE LV+  L 
Sbjct: 41  EKITDQELNLLTELSERLIKNEPPQYIVGWAEFYELKFKVDERVLIPRPETEELVEMILT 100

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +       D ++ILD+GTG+GA+ ++L K    +     DIS  ALE+A  NA  N V 
Sbjct: 101 EN-----NNDSLKILDIGTGSGAIAISLAKARQNWSVKASDISQNALELAAENAKMNHV- 154

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+
Sbjct: 155 -NLEFIQSDVMDELTDRFDIIVSNPPYIAFDETYEMDDSVIKYEPDLALFAKNQGLAIYQ 213

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL--VNAFKDYGGNDRVL 260
            IAD    HL  DG   +EIGY Q   V  IF+  K     V+  +D  G DR++
Sbjct: 214 KIADQAVNHLTDDGKIYLEIGYKQGKAVQAIFQE-KFTDRLVSIHQDIFGKDRMI 267


>gi|290892705|ref|ZP_06555697.1| modification methylase [Listeria monocytogenes FSL J2-071]
 gi|290557765|gb|EFD91287.1| modification methylase [Listeria monocytogenes FSL J2-071]
          Length = 283

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|325971907|ref|YP_004248098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta sp. Buddy]
 gi|324027145|gb|ADY13904.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta sp. Buddy]
          Length = 286

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 7/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L +VTG    + I+  D VL D Q   LT+     L H+ +  ILG R+FY   
Sbjct: 27  LDARLLLQQVTGFDQAKQILFFDKVLTDAQLDSLTSLRKVRLSHKPMAYILGRREFYGRD 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR +TE L+++ LAF+     K D   I+D+ TG+G + + L  E      
Sbjct: 87  FQVDERVLIPRSDTETLIEAVLAFAK---NKTDTPSIIDVCTGSGCIGITLALELGSA-V 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S  AL +A+ NA    VS     L  D  S  +  +D+IVSNPPY+ +   D + 
Sbjct: 143 TLTDLSEGALAVARENARRL-VSRPLTFLHGDLLSPTDKKYDIIVSNPPYLTASWCDEVA 201

Query: 185 LEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            EV  ++PR++L+G   DGL   R +      HL   G   +E  Y Q   V ++  S +
Sbjct: 202 FEV-QWEPRLALEGFSLDGLELIRALVAQSLDHLAAGGALFLECDYRQAETVKQLLVSSR 260

Query: 244 LFLVNAFKDYGGNDRVL 260
              V   KD  G +RV+
Sbjct: 261 FTNVRIEKDLAGRERVV 277


>gi|294010050|ref|YP_003543510.1| methylase of polypeptide chain release factors [Sphingobium
           japonicum UT26S]
 gi|292673380|dbj|BAI94898.1| methylase of polypeptide chain release factors [Sphingobium
           japonicum UT26S]
          Length = 275

 Score =  258 bits (660), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 11/261 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L     +  + +++      D          I R L  E I  I G RDF+ 
Sbjct: 21  PRLDAELLLAHALRIDRNTLLLRQR---DLSVPPGFDALIQRRLTGEPIAYITGTRDFWT 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PRP++E L+++AL    PR       RILDLGTG+GA+ LA L + P  
Sbjct: 78  ISLHVTPDVLIPRPDSETLIEAALDHFGPR----SPARILDLGTGSGALLLAALSQWPQA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G GVDIS  A+ +A+ NA   G+  R +    DW   + G FD+I+ NPPYI       
Sbjct: 134 TGTGVDISPAAVAVAQGNADRLGLGGRANFRLGDWAEGMGGPFDLILVNPPYIARD--AA 191

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V   +P  +L  G +GL  YR IA  + R L   G+ ++EIG++Q++ V  +   +
Sbjct: 192 LAGDVL-HEPETALFAGAEGLDDYRRIAPALPRLLAPGGMAAMEIGHDQRLSVSALLADQ 250

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L  V+  +D  G+DR L+  
Sbjct: 251 GL-GVSPRRDLAGHDRCLVAT 270


>gi|226225090|ref|YP_002759197.1| protoporphyrinogen oxidase [Listeria monocytogenes Clip81459]
 gi|225877552|emb|CAS06266.1| Putative protoporphyrinogen oxidase [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFEKDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPDISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|218660371|ref|ZP_03516301.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli IE4771]
          Length = 215

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 107/213 (50%), Positives = 141/213 (66%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +HRILG R+FY + L LS++T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA
Sbjct: 1   MHRILGEREFYGLPLQLSAETREPRPDTEILVDTVLAYLKDLAKVHGHLHILDIGTGTGA 60

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +CLALL E P   G+G DIS  AL  A+SNA  NG+ +RF  +QS WF  ++G F  IVS
Sbjct: 61  ICLALLSECPEASGIGSDISADALGTARSNAERNGLQDRFQAVQSRWFEDIQGSFHAIVS 120

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S ++  L  EV  FDP  +LDGG DGL  Y  IA   +R +  DG+  +EIGY+
Sbjct: 121 NPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDAYHAIAKDAARFMRPDGVLGLEIGYD 180

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q+ DV  IFE++    + + KDYG NDR L+F 
Sbjct: 181 QRNDVTAIFEAKGFSCLKSVKDYGQNDRALIFA 213


>gi|90961567|ref|YP_535483.1| peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius UCC118]
 gi|90820761|gb|ABD99400.1| Peptide release factor-glutamine N5-methyltransferase
           [Lactobacillus salivarius UCC118]
          Length = 279

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 129/258 (50%), Gaps = 7/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D    +C        Q++++  + +DD+    L   I    +   +  ++G++DFY +
Sbjct: 24  LEDVDYLICGQMVWDKTQLLMNYRTRIDDKNYQELQEKIELYNQDYPLQYLIGYQDFYGL 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL ++ DT  PRPETE LVD  L  +     K +   +LD+GTGTGA+ LAL      + 
Sbjct: 84  RLKVTKDTLIPRPETEELVDWILNDN----SKNENYDVLDVGTGTGAIGLALKSIRSNWN 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DIS  AL++AK NA    +   F T  SD F  +EG  D+IVSNPPYI       +
Sbjct: 140 IFLSDISEPALKVAKENAQNLNLDVSFST--SDLFEKIEGKKDIIVSNPPYISENEKIYM 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V +++P  +L    +GL  Y  IA+   + L +     +EIG+ Q   V +IF+   
Sbjct: 198 DKSVLNYEPHQALFAKNNGLEIYERIANESGKLLKQGSKIYMEIGFLQGEAVKKIFKDSF 257

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD  GNDR++
Sbjct: 258 PNSEITLKKDINGNDRMI 275


>gi|217963354|ref|YP_002349032.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes HCC23]
 gi|217332624|gb|ACK38418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes HCC23]
 gi|307572069|emb|CAR85248.1| modification methylase, HemK family [Listeria monocytogenes L99]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 114/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             +   KD    DR +
Sbjct: 261 STIIIHKDINSKDRYV 276


>gi|322421624|ref|YP_004200847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter sp. M18]
 gi|320128011|gb|ADW15571.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacter sp. M18]
          Length = 286

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 121/261 (46%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   LC    L    + ++ D  L D +     + + R  K E +  ILG ++F 
Sbjct: 28  NPRLEAEWMLCEALSLDRVGLYLNFDKPLSDAELAAYRSMVARRGKREPLQYILGTQEFM 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PR +TE+LV  A+              +LD+G G+G V +AL K  P 
Sbjct: 88  GLEFQVTPAVLIPRHDTEVLVTEAVKRGAVARS------VLDIGAGSGCVAVALAKALPP 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   VD+S +ALE+A+ NA  NG +      Q   F    G  FD++VSNPPYI +  +
Sbjct: 142 AEICSVDVSGEALEVARGNAERNGAT--VHFFQGSLFEPFAGRHFDMVVSNPPYIPNYEL 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR F+P  +LDGG DGL  YR I      +LN  G    E+G  Q   V+ + +
Sbjct: 200 ATLQAEVRGFEPMGALDGGGDGLDFYRRIISDAPGYLNPGGWLIFEVGAGQAPQVLGLLQ 259

Query: 241 SRKLFLVNAFK-DYGGNDRVL 260
           S         + D    +RV+
Sbjct: 260 SGGFTGETFTQTDPAAIERVV 280


>gi|46908714|ref|YP_015103.1| HemK family modification methylase [Listeria monocytogenes serotype
           4b str. F2365]
 gi|46881986|gb|AAT05280.1| modification methylase, HemK family [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 283

 Score =  258 bits (659), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|254825335|ref|ZP_05230336.1| modification methylase [Listeria monocytogenes FSL J1-194]
 gi|254932216|ref|ZP_05265575.1| modification methylase [Listeria monocytogenes HPB2262]
 gi|255519762|ref|ZP_05386999.1| HemK family modification methylase [Listeria monocytogenes FSL
           J1-175]
 gi|293583771|gb|EFF95803.1| modification methylase [Listeria monocytogenes HPB2262]
 gi|293594578|gb|EFG02339.1| modification methylase [Listeria monocytogenes FSL J1-194]
 gi|328465146|gb|EGF36414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Listeria monocytogenes 1816]
 gi|328471150|gb|EGF42054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Listeria monocytogenes 220]
 gi|332312972|gb|EGJ26067.1| Modification methylase [Listeria monocytogenes str. Scott A]
          Length = 283

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|224500714|ref|ZP_03669063.1| hypothetical protein LmonF1_13996 [Listeria monocytogenes Finland
           1988]
          Length = 283

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 TTVVIHKDINSKDRYV 276


>gi|194016564|ref|ZP_03055178.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus pumilus ATCC 7061]
 gi|194012037|gb|EDW21605.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus pumilus ATCC 7061]
          Length = 294

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 115/266 (43%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +   L  V  LS  +++      L + Q    +  + +  K   +  + G  
Sbjct: 21  EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPEEQDRLFSEFVKQHKKGVPVQHLTGIE 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++     PRPETE +V +AL            ++ +D+GTG+GA+ + L  E
Sbjct: 81  FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLQAVDVGTGSGAIAITLALE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175
                    DIS +AL +AK N    G       LQ D    ++      D+ +SNPPYI
Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGAD--VHFLQGDLLEPIKDQGIKVDLFISNPPYI 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +D L   V   +P  +L  G DGL  Y+ +   +   L+K  +   EIG+ Q  DV
Sbjct: 199 SAEEMDSLSEVVTKHEPVNALTDGRDGLWFYKRLIRDLHHVLHKQAVVVFEIGHTQGQDV 258

Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260
              + +S     V   KD  G DR +
Sbjct: 259 KALLLQSFPAADVRIVKDINGKDRAV 284


>gi|170746588|ref|YP_001752848.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653110|gb|ACB22165.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium radiotolerans JCM 2831]
          Length = 299

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 106/263 (40%), Positives = 144/263 (54%), Gaps = 3/263 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  + GL +  +++D    L       L  A+ R L  E + RILG  +F+
Sbjct: 29  EAAGDARFLLLGILGLETRDLLIDGSRRLGPADAASLAAALARRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  DT  PRP+TE+LV+ ALA    R ++   +R LDLGTG+G +  ALL E P 
Sbjct: 89  GLPFRLGPDTLVPRPDTEILVEVALA---ARPDRAAPLRCLDLGTGSGCILTALLSERPR 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG+D S  AL +A+ NAVTNGV +R   +  DW  ++ G FD++VSNPPYI   ++ 
Sbjct: 146 ATGVGLDRSEGALRVARDNAVTNGVGDRARFVAGDWCDALWGCFDLVVSNPPYIARAVIG 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP  +LDGG DGL  YR I  G    L   GL  +EIGY+Q   V  +  +
Sbjct: 206 TLEREVRGHDPAAALDGGADGLEAYRRILGGAGACLATGGLLVLEIGYDQAAAVTDLARA 265

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                    +D  G+DRVL F R
Sbjct: 266 AGYRARGLTRDLAGHDRVLSFDR 288


>gi|53717071|ref|YP_105274.1| hemK protein [Burkholderia mallei ATCC 23344]
 gi|67639916|ref|ZP_00438744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei GB8 horse 4]
 gi|121597316|ref|YP_990283.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1]
 gi|124381896|ref|YP_001024782.1| methyltransferase, HemK family protein [Burkholderia mallei NCTC
           10229]
 gi|126446694|ref|YP_001079121.1| protein hemK [Burkholderia mallei NCTC 10247]
 gi|167003350|ref|ZP_02269136.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei PRL-20]
 gi|254175844|ref|ZP_04882503.1| protein hemK [Burkholderia mallei ATCC 10399]
 gi|254203238|ref|ZP_04909600.1| hemK protein [Burkholderia mallei FMH]
 gi|254208573|ref|ZP_04914922.1| putative protein HemK [Burkholderia mallei JHU]
 gi|254355791|ref|ZP_04972070.1| protein hemK [Burkholderia mallei 2002721280]
 gi|52423041|gb|AAU46611.1| hemK protein [Burkholderia mallei ATCC 23344]
 gi|121225114|gb|ABM48645.1| methyltransferase, HemK family protein [Burkholderia mallei SAVP1]
 gi|124289916|gb|ABM99185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei NCTC 10229]
 gi|126239548|gb|ABO02660.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei NCTC 10247]
 gi|147746283|gb|EDK53361.1| hemK protein [Burkholderia mallei FMH]
 gi|147751260|gb|EDK58328.1| putative protein HemK [Burkholderia mallei JHU]
 gi|148024762|gb|EDK82945.1| protein hemK [Burkholderia mallei 2002721280]
 gi|160696887|gb|EDP86857.1| protein hemK [Burkholderia mallei ATCC 10399]
 gi|238520528|gb|EEP83987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei GB8 horse 4]
 gi|243061103|gb|EES43289.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia mallei PRL-20]
          Length = 285

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 125/261 (47%), Gaps = 11/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +
Sbjct: 22  ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +  ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 82  KFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              ++ S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI  
Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + ++     V +  D    +R
Sbjct: 257 LLDAAGFADVESRADLASIER 277


>gi|220915514|ref|YP_002490818.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219953368|gb|ACL63752.1| modification methylase, HemK family [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 286

 Score =  258 bits (659), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 11/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L         ++ +D D  L + +     + + R  + E    + G RDFY     
Sbjct: 32  AELLLAHALRCERMRLYLDFDKPLGEPELAAFRDLVRRRAEGEPTAYLTGRRDFYGRPFL 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETEL++++A      R    +    LDL TG+GA+ ++L  E P  + V 
Sbjct: 92  VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERPGARVVA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
            D+S  AL +A  NA   G +   D  Q D ++ +     FDVIVSNPPY+    +D L 
Sbjct: 146 TDLSADALAVAAENARALGAA--VDLRQGDLWAPLRAGERFDVIVSNPPYVPRGELDTLP 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +PR++LDGG DGLS  R I +G    L   G   +E+       + R+      
Sbjct: 204 REVRR-EPRLALDGGPDGLSLLRRIVEGAPARLAPGGTLVLEMHEGHLELLPRLCRDAGF 262

Query: 245 FLVNAFKDYGGNDRVLLFC 263
               A +D  G  R+ +  
Sbjct: 263 AQAEARRDLAGLPRLTVAR 281


>gi|257066245|ref|YP_003152501.1| modification methylase, HemK family [Anaerococcus prevotii DSM
           20548]
 gi|256798125|gb|ACV28780.1| modification methylase, HemK family [Anaerococcus prevotii DSM
           20548]
          Length = 262

 Score =  257 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 8/254 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   +   VI+  +  LD      L   + +  +   +   +G  +FY +   +   
Sbjct: 16  LTYLLDTNKSSVILKSEEELDSEISLKLDQILKKYSEGYPLQYAIGEWEFYGLNFKVDER 75

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD  +             RILD+GTG+GA+ ++L +  P  + +G DI 
Sbjct: 76  ALIPRFETEIIVDFIIK------SPYKKNRILDIGTGSGAISISLARNLPTSEIIGSDIE 129

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            KAL +A+ N      S     ++SD F  +   FD+I+SNPPYI     D L  E    
Sbjct: 130 EKALSLARENKKRLKAS-NVSFIKSDLFEEISEKFDIIISNPPYINQTDYDKLD-ERLYH 187

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L    DGL  Y+ I    + +LN  G    EIGY+QK  +  +        +   
Sbjct: 188 EPKSALLASEDGLYFYKRIIKEANSYLNDGGRLVFEIGYDQKQRICELLNESDFKNIKCM 247

Query: 251 KDYGGNDRVLLFCR 264
           KDY   DR ++  +
Sbjct: 248 KDYNDFDRFIIAEK 261


>gi|33595094|ref|NP_882737.1| heme biosynthesis protein [Bordetella parapertussis 12822]
 gi|33565171|emb|CAE35967.1| heme biosynthesis protein [Bordetella parapertussis]
          Length = 270

 Score =  257 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++      V G S   ++      ++            R L  E +  +LG R+F  
Sbjct: 14  PRLEARMLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               L+ D   PRP+TELLV++AL +   R+      R+LDLGTG+GA+ +++    P  
Sbjct: 74  HWFALTPDVLIPRPDTELLVETALHWLQGRV----APRVLDLGTGSGAIAVSVALGCPQA 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +    D+S  AL +A+ NA   G   R   L  DW+ ++     +D+IVSNPPYI     
Sbjct: 130 QVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDA 187

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L    DGL+    IA G    L   G   +E G++Q      +  
Sbjct: 188 HLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLR 246

Query: 241 SRKLFLVNAFKDYGGNDRV 259
              L  V++ +D  G +R+
Sbjct: 247 QAGLREVHSRRDLAGIERI 265


>gi|229014498|ref|ZP_04171616.1| Protein hemK [Bacillus mycoides DSM 2048]
 gi|228746848|gb|EEL96733.1| Protein hemK [Bacillus mycoides DSM 2048]
          Length = 283

 Score =  257 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAQFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 RAQVEVVFDINGKDRMVFA 280


>gi|222529062|ref|YP_002572944.1| HemK family modification methylase [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455909|gb|ACM60171.1| modification methylase, HemK family [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 288

 Score =  257 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L ++  +   +VI++    ++  +   + NAI + L+   +        F  + L 
Sbjct: 34  ALMMLSQILNMEKTEVILNKGLPVEQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLELY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + +  +  LD+GTG+G + +AL K     K   
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKSKKNLYFLDIGTGSGCIAVALCKFL-DCKVFA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A  NA  NGV  R   ++S+ F  +     +D I+SNPPYI    +  L 
Sbjct: 149 VDISERALEVASKNAKLNGVENRISFVRSNLFEDIPKNLRYDAIISNPPYISDEEIFELD 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P I+L    DGL  +R IA+    +L   G    E+G++Q   V  I +    
Sbjct: 209 PRVLK-EPHIALFSKEDGLWFFREIANKAKLYLKDGGYIIFEVGFSQAEKVKEILKKNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             +++ +D    +R +  
Sbjct: 268 KNISSRRDLNNVERCIFA 285


>gi|291561382|emb|CBL40181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SS3/4]
          Length = 387

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 81/336 (24%), Positives = 131/336 (38%), Gaps = 81/336 (24%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLD----------------------------- 31
           ++A  D+     ++ G+S  Q  +     +                              
Sbjct: 48  VEADLDAWYLFGQIFGISRAQYFLCARENIAGSTAQKMAAQEQTGNSLESKNALDCVELW 107

Query: 32  -DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
              +     N + +      + +ILG ++F  +   ++     PR +TE LV+  L    
Sbjct: 108 LKEKLSAYENTLEKRASRIPLQQILGQQEFMGLTFFVNEHVLIPRQDTETLVELVLNE-- 165

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV-------- 142
              +K   + ILD+ TG+G + ++L K   +    G DIS +AL++AK N+         
Sbjct: 166 ---QKDKNISILDMCTGSGCIAVSLKKLGGYACVEGADISEEALKVAKRNSEEILENSDV 222

Query: 143 ------------------------------------TNGVSERFDTLQSDWFSSVEG--L 164
                                                 G         SD FSS      
Sbjct: 223 NNDAVSSRTEQIQNCTNLTNNQNKQDNSEERMVSEVRRGSQTGVTFRHSDMFSSFRETEQ 282

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F+VIVSNPPY+ S +++ L  EVRD +PR +LDG  DGL  YR +A+  ++HL   G   
Sbjct: 283 FNVIVSNPPYVPSAVIEELEPEVRDHEPRGALDGTADGLYFYRILAEECAKHLTPGGHVY 342

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            EIGY+Q + V  + ++         +D  G DRV+
Sbjct: 343 FEIGYDQGMAVKELLDNHGFKDTRVIQDLTGKDRVV 378


>gi|317130772|ref|YP_004097054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cellulosilyticus DSM 2522]
 gi|315475720|gb|ADU32323.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus cellulosilyticus DSM 2522]
          Length = 290

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 7/261 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +   TG S  ++  +  + L           + ++     +  I+G   FY     
Sbjct: 28  AQLLMRHHTGWSRSRLFSEMQTTLPAPIWTRFEADVRQAATGTPVQHIIGHEQFYGRDFK 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGV 125
           ++S+   PRPETE L+++ L         R+  +RI+D+GTG+G + + L  E       
Sbjct: 88  VNSNVLIPRPETEELIEALLGKIKSLFLNREQPIRIVDVGTGSGIIAITLALEVVHSHVH 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            VDIS  AL++A+SNA   G   +    + D           FD+++SNPPYI       
Sbjct: 148 AVDISQAALDVARSNATALGA--KVTFHEGDLLEPFLAESSEFDIVISNPPYIPEGDRAI 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES- 241
           +   V D +P ++L  G DGL+ YR +   +   L+K GL + EIG+ Q   V  +  + 
Sbjct: 206 MKENVLDHEPALALFAGQDGLTIYRKLIKQIPFVLHKKGLVAFEIGHGQGESVKALLAAE 265

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                +    D  G +R+++ 
Sbjct: 266 YPAADIAVLNDINGKERIVIA 286


>gi|229136147|ref|ZP_04264900.1| Protein hemK [Bacillus cereus BDRD-ST196]
 gi|228647306|gb|EEL03388.1| Protein hemK [Bacillus cereus BDRD-ST196]
          Length = 283

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I + ++   I  +LG+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITAEQEESFAEFIHKHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L    + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQNKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 RAQVEVVFDINGKDRMVFA 280


>gi|239828603|ref|YP_002951227.1| modification methylase, HemK family [Geobacillus sp. WCH70]
 gi|239808896|gb|ACS25961.1| modification methylase, HemK family [Geobacillus sp. WCH70]
          Length = 288

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 116/263 (44%), Gaps = 7/263 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC    ++  Q+       +D+  R      + + + +H  +  ++G   FY  
Sbjct: 24  RAAELLLCHHLQITRAQLFARLRDPIDENVRQSFEADVRKHVYEHVPVQHLIGLEQFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ +   PRPETE LV+  L            + ++D+GTG+GA+ + L  E+   +
Sbjct: 84  PFLVNRNVLIPRPETEELVEGVLTRITQLFPGNKTIDVVDVGTGSGAIAITLALENKSLR 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              +DI+ +ALE+AK NA   G       +  D    +       DV+VSNPPYI    +
Sbjct: 144 VAAIDIAPEALEVAKRNAERLGAD--VAFICGDLLQPLVEASRKVDVVVSNPPYIPENEI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D++P  +L GG DGL  YR  A  +   L +  L + E+G  Q   V  I  
Sbjct: 202 ASLSPVVKDYEPLRALSGGKDGLDFYRRFARELPFVLKERALVAFEVGAGQGEAVAAILR 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLF 262
                  V    D  G DR++  
Sbjct: 262 QTFPQAEVEVVFDINGKDRMVYA 284


>gi|116493077|ref|YP_804812.1| methylase of polypeptide chain release factor [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103227|gb|ABJ68370.1| Methylase of polypeptide chain release factor [Pediococcus
           pentosaceus ATCC 25745]
          Length = 283

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 7/255 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L      S  ++I+     L   Q      A+ R  K E +  +     F+     +
Sbjct: 29  ELILMDTMEWSRTELIMHYREKLFPEQWEKFQTAVKRVAKGEPVQYVTNKATFFGREFYV 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PR ETE LV++ L+ +      R  +R+LD+GTG+G + + L  E P +    V
Sbjct: 89  DKRVLIPRVETEELVETILSKTK---RSRQRLRVLDIGTGSGDIAITLKLERPEWLVTAV 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL +A+ NA ++      D      F  V+G  FD+I+SNPPYI       +   
Sbjct: 146 DISKDALTVAQRNAESHEAI--VDFRLGSLFEPVQGERFDLIISNPPYIADNEKHEMDQS 203

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V DF+P  +L     GL  Y+ IAD + ++L + G    EIGY Q  D+ + F  +K   
Sbjct: 204 VIDFEPHQALFADDHGLFWYKRIADQLDQYLVEHGELGCEIGYRQGTDLKKYFLEKKYID 263

Query: 247 -VNAFKDYGGNDRVL 260
                KD   +DR+L
Sbjct: 264 QAEVIKDLSQHDRIL 278


>gi|213962836|ref|ZP_03391096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga sputigena Capno]
 gi|213954493|gb|EEB65815.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga sputigena Capno]
          Length = 287

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 8/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L      ++  V+ + D++L D  +  +  AI      + I  ILG  +F++ R  + 
Sbjct: 29  ILLEHYVNYTTADVLANADTLLTDDIKQSIQQAITELQTAKPIQYILGETEFFSNRFFVD 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE LVD  L       +K   + ILD+GTG+G + ++L K  P      +D
Sbjct: 89  ENVLIPRPETEELVDWVLQT---YPDKNYPLHILDIGTGSGCIPISLAKALPKSVVTAID 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S KA+ +A+ NA  NGV  +   LQ D     ++   +DVI+SNPPY+  +    +   
Sbjct: 146 VSPKAITVAQRNADRNGV--KIQFLQCDILQTKTLPQKYDVIISNPPYVRELEKTEMHSN 203

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V  ++P ++L    +  L  Y  IA    R+L  +G    EI      ++  +   +   
Sbjct: 204 VLSYEPHLALFVPNERPLLFYEQIASLAQRYLKPEGSLFFEINQYLAAEMQAMLTQKNFA 263

Query: 246 LVNAFKDYGGNDRVL 260
            +   +D  GNDR+L
Sbjct: 264 EIILRQDLSGNDRML 278


>gi|312793257|ref|YP_004026180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180397|gb|ADQ40567.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 288

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   + ++ G+   +VI++    +   +   + NAI R L+   +        F      
Sbjct: 34  ALMMVSQILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K     K + 
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  +   ++S+ F ++     FD I+SNPPYI    +  L 
Sbjct: 149 VDISERALEVARKNAKLNGVENKISFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELD 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P I+L    DG   ++ IA+    +L   G    E+G++Q  +V RI E +  
Sbjct: 209 QRVLK-EPHIALFSKEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQKGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             + + KD    +R +  
Sbjct: 268 KNIKSRKDLNNIERCIFA 285


>gi|149914650|ref|ZP_01903180.1| modification methylase, HemK family, putative [Roseobacter sp.
           AzwK-3b]
 gi|149811443|gb|EDM71278.1| modification methylase, HemK family, putative [Roseobacter sp.
           AzwK-3b]
          Length = 278

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 132/259 (50%), Gaps = 9/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R++   L  V  ++  ++ +     L             R    E +  +LG+R+FY
Sbjct: 23  DPAREARLILAHVLDVAPGRMTMLAPEPLQAGALAAAAGLAQRRAAGEPMAHLLGYREFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  + +   +PRPETE LV+ ALA +          R+LDLGTG+G + L+LL E P 
Sbjct: 83  GRRFAVDARVLDPRPETETLVERALAVAFS--------RVLDLGTGSGCILLSLLAERPD 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVGVD+S  ALE+A+ NA    +S R + L SDWF++V G FD+IVSNPPYI +  + 
Sbjct: 135 ATGVGVDLSEDALEVARRNAARLDLSARCEFLVSDWFAAVRGTFDLIVSNPPYIAADEMA 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E   ++PR++L     GLS YR I       L + G   VEIG+ Q  DV  +  +
Sbjct: 195 GLARE-LQYEPRMALTDEGCGLSAYRAIVAEAGACLVEGGRLIVEIGWRQGADVADLMRA 253

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    D  G DRV+
Sbjct: 254 GGFAEVCVRPDLDGRDRVV 272


>gi|83310718|ref|YP_420982.1| methylase of polypeptide chain release factor [Magnetospirillum
           magneticum AMB-1]
 gi|82945559|dbj|BAE50423.1| Methylase of polypeptide chain release factor [Magnetospirillum
           magneticum AMB-1]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 138/262 (52%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  V G+   ++     + L   +   L   + R    E +  ILG R F+ 
Sbjct: 23  AHYDARLLVAEVLGVEMRRLPASHHAELTGDEAARLAALLERRAAREPMSHILGRRGFWT 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +++DT +PRP+TE L+++ L     R   R   R+LD GTGTG + L LL E    
Sbjct: 83  LEFAVTADTLDPRPDTETLIEAVLDALEDRGRPR---RLLDFGTGTGCILLTLLSELGHA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D S  AL +A  NA++ G++ R +    DW   + G FDVIVSNPPYI    +D 
Sbjct: 140 TGLGIDASPAALAVAGRNALSLGLAPRAEFRLGDWGEGLNGQFDVIVSNPPYIPDAEIDG 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  ++PR +L GG DGL  YR +   ++R L   G+ ++E+G  Q VDV  +  + 
Sbjct: 200 LEPEVARYEPRSALAGGSDGLECYRRLIPHMARLLAPGGIAALEVGAGQAVDVCALLAAA 259

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L   +  +D GG +R ++  R
Sbjct: 260 GLAGASVRRDLGGIERCVIVRR 281


>gi|163943016|ref|YP_001647900.1| HemK family modification methylase [Bacillus weihenstephanensis
           KBAB4]
 gi|163865213|gb|ABY46272.1| modification methylase, HemK family [Bacillus weihenstephanensis
           KBAB4]
          Length = 283

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              LC V   +   ++++    +   Q       I   ++   I  +LG+  FY     +
Sbjct: 25  EIVLCHVLKTNRTGMLMNMREEITAEQEKSFAEFIHNHVEGIPIQYMLGYEMFYGRSFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE L+   L          + + I D+GTG+GA+ + L  E+       V
Sbjct: 85  NEEVLIPRPETEELIVGVLERIERHFGNEE-LHIADIGTGSGAISITLALENKNLHVYTV 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+ +++E+AK NA T G          D  S         DV+VSNPPYI       L 
Sbjct: 144 DIAQESIEVAKENAKTLGAD--VTFYHGDLLSPFYETGQKLDVVVSNPPYIPEEDWRGLS 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +    
Sbjct: 202 TVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKALLQQTFP 261

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 262 RAQVEVVFDINGKDRMVFA 280


>gi|126441418|ref|YP_001060596.1| putative protein hemK [Burkholderia pseudomallei 668]
 gi|126452796|ref|YP_001067846.1| protein hemK [Burkholderia pseudomallei 1106a]
 gi|134283321|ref|ZP_01770022.1| HemK-like protein [Burkholderia pseudomallei 305]
 gi|167825995|ref|ZP_02457466.1| protein methyltransferase HemK [Burkholderia pseudomallei 9]
 gi|167847482|ref|ZP_02472990.1| protein methyltransferase HemK [Burkholderia pseudomallei B7210]
 gi|167896070|ref|ZP_02483472.1| protein methyltransferase HemK [Burkholderia pseudomallei 7894]
 gi|167904456|ref|ZP_02491661.1| protein methyltransferase HemK [Burkholderia pseudomallei NCTC
           13177]
 gi|167912717|ref|ZP_02499808.1| protein methyltransferase HemK [Burkholderia pseudomallei 112]
 gi|167920677|ref|ZP_02507768.1| protein methyltransferase HemK [Burkholderia pseudomallei BCC215]
 gi|226198254|ref|ZP_03793825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei Pakistan 9]
 gi|237813981|ref|YP_002898432.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei MSHR346]
 gi|242318052|ref|ZP_04817068.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106b]
 gi|254198427|ref|ZP_04904848.1| putative protein hemK [Burkholderia pseudomallei S13]
 gi|254300724|ref|ZP_04968169.1| protein Hemk [Burkholderia pseudomallei 406e]
 gi|126220911|gb|ABN84417.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 668]
 gi|126226438|gb|ABN89978.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106a]
 gi|134245516|gb|EBA45609.1| HemK-like protein [Burkholderia pseudomallei 305]
 gi|157810623|gb|EDO87793.1| protein Hemk [Burkholderia pseudomallei 406e]
 gi|169655167|gb|EDS87860.1| putative protein hemK [Burkholderia pseudomallei S13]
 gi|225929774|gb|EEH25790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei Pakistan 9]
 gi|237504345|gb|ACQ96663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei MSHR346]
 gi|242141291|gb|EES27693.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1106b]
          Length = 285

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 11/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +
Sbjct: 22  ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 82  EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              ++ S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI  
Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + ++     V +  D    +R
Sbjct: 257 LLDAAGFADVESRADLASIER 277


>gi|312865012|ref|ZP_07725240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus downei F0415]
 gi|311099123|gb|EFQ57339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus downei F0415]
          Length = 276

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL     ++     + +  +  L     R L HE    ILG+  F++++L +      PR
Sbjct: 33  GLDMTGFVLLLRQEVSEEDQALLARIAQRLLAHEPAQYILGYETFHDLKLKVDKRILIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PET  LVD  LA +       + + +LD+GTG+GA+ LAL  E P ++ V  DIS +AL+
Sbjct: 93  PETAELVDLILAEN-----ADEQLDLLDIGTGSGAIALALAHERPTWRIVASDISQEALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +AK NA  N ++   D  QSD FS +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LAKENAQANQIA--VDFCQSDLFSQLSVSYDIIVSNPPYISEADKAEVGLNVLTSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    +GL+ YR +A    +HL  DG   +EIGY Q   V ++F        V    D  
Sbjct: 206 LFADEEGLAIYRKLAQQAGKHLKADGKIYLEIGYKQGQIVSQLFREAFPDKRVRVLPDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|187251501|ref|YP_001875983.1| protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum
           Pei191]
 gi|186971661|gb|ACC98646.1| Protein-(glutamine-N5) methyltransferase [Elusimicrobium minutum
           Pei191]
          Length = 277

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  LS   V+ + +  +         + I + L    +  I G +DF      
Sbjct: 27  AEFLLAHVLNLSRGVVLSNQEREVGAEDAQKYFDFINKRLLGMPLAYITGTQDFCGHTFI 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + SD   PRPETE LV+ + +            RILD+ TG+G +  ++  +    +  G
Sbjct: 87  VDSDVLVPRPETEELVEISSSML------GKPKRILDMCTGSGCIACSMAMKYRSAQVTG 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           VD S  AL  A+ N    G+    + +  D F ++ G FD+I++NPPYI +  +  L  E
Sbjct: 141 VDNSMAALLTAEKNVKKFGLQ-NVELIYGDLFENIYGAFDLIITNPPYIPTGDLAGLSRE 199

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V++ +P+ +LDGG +GL     I       L   GL ++E G N++ ++  +F+      
Sbjct: 200 VKE-EPQAALDGGENGLDIITQIILYAPDFLETGGLLTMEYGINREREIEGLFDKNIWRS 258

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V   KD  G  R +   +
Sbjct: 259 VEVKKDMFGIYRFVFAQK 276


>gi|302036344|ref|YP_003796666.1| protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira
           defluvii]
 gi|300604408|emb|CBK40740.1| Protein-(glutamine-N5) methyltransferase [Candidatus Nitrospira
           defluvii]
          Length = 309

 Score =  257 bits (657), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 10/269 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++  ++   L  V  +S     V  +  +       +   + R    E +  +LG ++F 
Sbjct: 34  ESALEAAWLLEHVLHVSPLMQRVQAERPVTAVDYASMQELVARRANREPLQYLLGTQEFC 93

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++S    PRPE+ LLV      ++ R  +     ++D+GTG+G + +++    P 
Sbjct: 94  DREFRVTSAVLIPRPESALLVQE----TIRRCRQNPSAIVVDVGTGSGCLAVSVASALPD 149

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
            + + +D S  AL +A++N    G   R + +Q D  + +         DVIVSNPPYI 
Sbjct: 150 ARVLAIDASADALAVAQANMEQFGFGARIECVQGDLLAPLAQRGETSQVDVIVSNPPYIA 209

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            + +  L  EVR F+P ++L GG DG+  +R +      +L   G+  +E+G  Q   V 
Sbjct: 210 DLDLVTLQPEVRCFEPHLALAGGPDGMDVHRRLLQQAPVYLKSRGVLLMEVGLGQAELVC 269

Query: 237 RIFESRKLFLV-NAFKDYGGNDRVLLFCR 264
           R  E    F   +  +D GG DRV+ F +
Sbjct: 270 REAEKSGWFRTYDVLRDEGGIDRVVCFEK 298


>gi|296775700|gb|ADH42976.1| polypeptide chain release factor methylase [uncultured SAR11
           cluster alpha proteobacterium H17925_38M03]
          Length = 279

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/259 (31%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + DS   L +    S  +++V+ +  + D++       + R  ++E I  I+  ++F+  
Sbjct: 23  ILDSEILLSKTLNKSREEILVNLNFEIKDKEILVFNEYLNRRSQNEPIAYIVEEKEFWGE 82

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +  ++ DT  PRPETELLVD  L     +I     V ILD+GTG+G + L+LL       
Sbjct: 83  KFYVNKDTLIPRPETELLVDKIL-----KIYNGKKVTILDMGTGSGCIILSLLNNLNKSY 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+GVDIS +A+ IAK NA    +  +       + +     FD+IVSNPPY+    +  L
Sbjct: 138 GIGVDISKRAILIAKKNASRLKILNKVKFFNRPFENIFYKKFDLIVSNPPYVIRKDIKNL 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V+ F+P+I++DGG DGL   + +       L   G+ ++EIG  Q   V +I  +  
Sbjct: 198 SPDVKKFEPKIAIDGGNDGLDLIKKVIYKSKNILKIKGVLALEIGNEQYKKVSKILVNNS 257

Query: 244 LFLVNAFKDYGGNDRVLLF 262
             + N  KDY  N R ++ 
Sbjct: 258 FKIKNTIKDYKNNVRCIIA 276


>gi|53720683|ref|YP_109669.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243]
 gi|76809364|ref|YP_334969.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b]
 gi|217424835|ref|ZP_03456332.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 576]
 gi|254190472|ref|ZP_04896980.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254258481|ref|ZP_04949535.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1710a]
 gi|52211097|emb|CAH37085.1| protein methyltransferase HemK [Burkholderia pseudomallei K96243]
 gi|76578817|gb|ABA48292.1| protein methyltransferase HemK [Burkholderia pseudomallei 1710b]
 gi|157938148|gb|EDO93818.1| putative HemK protein [Burkholderia pseudomallei Pasteur 52237]
 gi|217392291|gb|EEC32316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 576]
 gi|254217170|gb|EET06554.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1710a]
          Length = 285

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 11/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +
Sbjct: 22  ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 82  EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              ++ S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI  
Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRT 256

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + ++     V +  D    +R
Sbjct: 257 LLDAAGFADVESRADLASIER 277


>gi|167740376|ref|ZP_02413150.1| protein methyltransferase HemK [Burkholderia pseudomallei 14]
          Length = 284

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 12/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +
Sbjct: 22  ALDARILLAHALGWSRTQLITRADEPLDAA-RARYLALQARRAAGEPIAQLTGAREFFGL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P  +
Sbjct: 81  EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAR 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              ++ S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI  
Sbjct: 137 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 196

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 197 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 255

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + ++     V +  D    +R
Sbjct: 256 LLDAAGFADVESRADLASIER 276


>gi|94676905|ref|YP_588738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94220055|gb|ABF14214.1| protein methyltranferase HemK [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 281

 Score =  256 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 130/265 (49%), Gaps = 11/265 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L ++   S   ++   +++L+D Q   L N + R L+ E I  I+G  +F++
Sbjct: 21  PRLDAELLLGQIVSTSRAHILAFGNNLLNDNQYKQLENLLERRLRGEPIAYIIGEWEFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +S DT  PRP+TE LV+ AL   LP        ++LDLGTGTGA+ LAL  E P +
Sbjct: 81  LPIRVSPDTIIPRPDTECLVEQALGLLLPI-----HAKVLDLGTGTGAITLALASERPSW 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           +  GVD    A+E+A  NA   G+      L   WF  ++      + +I+SNPPY+++ 
Sbjct: 136 QFTGVDNHPGAVELADINAARLGL-NNVRFLCGSWFEPLQSQVTPRYSLIISNPPYVDAN 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                 L V  F+P+ +L    +G++    I    S +L   G   +E G+ Q  +V  +
Sbjct: 195 DPHLNNLGV-CFEPKSALVADCNGIADLAAICCQASTYLQHKGWIILEHGWLQGKEVRTL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
                   +    DY  ++RV +  
Sbjct: 254 LMKAGFIHIVTTHDYSNHERVTMGQ 278


>gi|254993430|ref|ZP_05275620.1| HemK family modification methylase [Listeria monocytogenes FSL
           J2-064]
          Length = 283

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 113/256 (44%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHSVKNVLDVCTGSGIIAIALKKAFPEISMTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKL 244
            V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S   
Sbjct: 201 YVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPH 260

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD    DR +
Sbjct: 261 STVIIHKDINSKDRYV 276


>gi|312115444|ref|YP_004013040.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311220573|gb|ADP71941.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 306

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 99/264 (37%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+        G SS +++   D+ L             R    E + RI+G R+F+ 
Sbjct: 23  AALDARLLSAYAAGFSSEEIVTKRDTALPPEILDRAIAVAQRRFAGEPVSRIVGTREFWG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS  T +PRP+TE+LVD+ LA+          +RILDLGTGTG +  ALL E P  
Sbjct: 83  MPFGLSPHTLDPRPDTEVLVDAGLAWCRKHDLANAPLRILDLGTGTGCILAALLSELPKA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
            GVGVD S  AL  A++N    G+S R      DW  ++ +  FD+I  NPPYIE+  + 
Sbjct: 143 TGVGVDRSEGALRTARANFARLGLSSRAFFFCGDWGVALADATFDIIACNPPYIETADIA 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVRDFDP ++LDGG DGL  YR I    SR L   GL   E G+ Q   V  +   
Sbjct: 203 GLCAEVRDFDPALALDGGKDGLKAYRDIVPQASRLLRVPGLLIFETGHRQARSVRDMVTE 262

Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264
               F    F D  G +R +   R
Sbjct: 263 LDAGFQTEIFLDLAGIERAVAGVR 286


>gi|303232598|ref|ZP_07319284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae PB189-T1-4]
 gi|302481385|gb|EFL44459.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Atopobium vaginae PB189-T1-4]
          Length = 546

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 122/262 (46%), Gaps = 5/262 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S   +C  T L+  ++ ++ D VL + +   +   +    + + +  I G   F ++ L 
Sbjct: 51  SQWLICAATKLTRVELFLNFDRVLTNDELACMHKLVAARAEGKPLQYITGEMAFRHIVLR 110

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
                  PRPETE+LV+ AL              IL++GTG+G + L++  E        
Sbjct: 111 CEEQVLIPRPETEMLVEYALNKLTILHTAPHTPVILEIGTGSGCIALSIASELEHSHVTA 170

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDC 182
            D S  A  +A+ NA   G+    D +++ +       ++G  D ++SNPPYI S IVD 
Sbjct: 171 TDSSPFACSLAQRNAHALGLDSAVDIIETSYADGVSPQLKGNVDALISNPPYIPSAIVDT 230

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRDF+P  +LDGG DGL  +R + + V  ++   G   VE+  +      ++    
Sbjct: 231 LTSEVRDFEPHAALDGGTDGLRVFRGLLELVPTYVRPGGFFCVELFEDNVQTAAQLCRQS 290

Query: 243 KLF-LVNAFKDYGGNDRVLLFC 263
            LF  V   KD  G  R ++  
Sbjct: 291 NLFSTVEVTKDLAGRSRFIIAT 312


>gi|302872095|ref|YP_003840731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302574954|gb|ADL42745.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 288

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   + ++  +   +VI++    +   +   + NAI + L+   +        F  +   
Sbjct: 34  ALMMVSQILDIDKTEVILNKGLPVGQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K     K + 
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKDRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  R   ++S+ F  +     FD I+SNPPYI       L 
Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRFDAILSNPPYISESERFKLE 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +V   +P I+L    +GL  ++ IA     +L   G    E+G++Q  +V RI E    
Sbjct: 209 KQVLK-EPHIALFSKENGLWFFKEIASKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             + + KD    +R +  
Sbjct: 268 ENIKSRKDLNNIERCIFA 285


>gi|146337702|ref|YP_001202750.1| putative methyltransferase hemK modifies release factors RF-1 and
           RF-2 [Bradyrhizobium sp. ORS278]
 gi|146190508|emb|CAL74507.1| Putative protein methyltransferase hemK modifies release factors
           RF-1 and RF-2 [Bradyrhizobium sp. ORS278]
          Length = 295

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 128/262 (48%), Gaps = 2/262 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +     L    +++     L       L   + R L  E + RILG ++F+ 
Sbjct: 29  PELDARLLVGHALQLDLTGLVMHGKRALSHDDAQRLDALVQRRLAGEPVARILGHKEFWG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS+DT  PRP+TE +V+ AL            +RI DLGTG+GA+ LALL E P  
Sbjct: 89  LELRLSADTLVPRPDTETVVELALDHLSAGGALTRPLRIGDLGTGSGAILLALLSELPRA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GVG DIS  AL  A+ NA   G+++R   +   + +++   FD+IVSNPPYI S  +  
Sbjct: 149 SGVGTDISIAALTTARENARALGLNDRAAFVACSYATALAPPFDLIVSNPPYIPSADIAG 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   DP  +LDGG DGL+ YRT+    +  L   G   VE+G  Q  DV  +    
Sbjct: 209 LATEVHAHDPLRALDGGGDGLAAYRTLIPQAALLLQTGGAVIVEVGQGQSGDVAGLMTEA 268

Query: 243 KLF--LVNAFKDYGGNDRVLLF 262
            L         D  G  R ++ 
Sbjct: 269 GLASDSSAIRADLAGIPRAVMA 290


>gi|197120813|ref|YP_002132764.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaeromyxobacter sp. K]
 gi|196170662|gb|ACG71635.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaeromyxobacter sp. K]
          Length = 286

 Score =  256 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 11/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L         ++ +D D  L + +       + R  + E    + G RDFY     
Sbjct: 32  AELLLAHALRCERMRLYLDFDRPLGEPELAAFRELVRRRAEGEPTAYLTGRRDFYGRPFL 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETEL++++A      R    +    LDL TG+GA+ ++L  E P  + V 
Sbjct: 92  VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERPGARVVA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
            D+S  AL +A  NA   G +   D  Q D ++ +     FDVIVSNPPY+    +D L 
Sbjct: 146 TDLSADALAVAAENARALGAA--VDLRQGDLWAPLREGERFDVIVSNPPYVPRGELDTLP 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +PR++LDGG DGLS  R I +G    L   G   +E+       + R+      
Sbjct: 204 REVRR-EPRLALDGGPDGLSLLRRIVEGAPTRLVPGGTLVLEMHEGHLELLPRLCRDAGF 262

Query: 245 FLVNAFKDYGGNDRVLLFC 263
               A +D  G  R+ +  
Sbjct: 263 ERAEARRDLAGLPRLTVAR 281


>gi|51246577|ref|YP_066461.1| HemK methylase [Desulfotalea psychrophila LSv54]
 gi|50877614|emb|CAG37454.1| related to HemK methylase [Desulfotalea psychrophila LSv54]
          Length = 291

 Score =  256 bits (655), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 137/270 (50%), Gaps = 14/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D    L    G +  ++ + P++ +           + R ++ E +  ILG ++F++
Sbjct: 22  ALVDVQLLLGHCLGKTRTELFLYPENPVSSGSEAAFNLLLARRVQREPLAYILGEQEFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++S    PRPETE +++  LA +    E   V  +LDL TG+G + + L KE    
Sbjct: 82  LDFKVNSHVLIPRPETEFMLEKVLASAGAWRE--SVTPVLDLCTGSGVIAVVLAKELGRP 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
             V VDIS +AL++A+ NA  + V+  F  ++SD F+++E    F +IVSNPPY+    +
Sbjct: 140 -VVAVDISEEALQVARFNAHRHHVAINF--IRSDLFANIEPLHQFGLIVSNPPYVSRGAI 196

Query: 181 -DCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              L  EV  ++P ++LDGG  DGL   R + D + ++L+  G   +E G +Q   +  +
Sbjct: 197 AHELEPEVASYEPHLALDGGAGDGLDFIRRMRDDLPKYLSLGGEVFIEFGADQGAAIADL 256

Query: 239 FESRK-----LFLVNAFKDYGGNDRVLLFC 263
           F            V+  +DY   DRVL   
Sbjct: 257 FAEPGSDGSSFTDVHVLQDYARRDRVLYAR 286


>gi|218264487|ref|ZP_03478320.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221980|gb|EEC94630.1| hypothetical protein PRABACTJOHN_04020 [Parabacteroides johnsonii
           DSM 18315]
          Length = 291

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 14/264 (5%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              + RV  +  H  +   D  L + ++  + + + R  + E I  ILG  DFY+++  +
Sbjct: 35  RLIMERVCNIQPHHFLFCKDKELPESEKSRIHDIVERLKQMEPIQYILGTADFYSLQFEV 94

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PRPETE LV+  +  +  +      ++ILD+GTG+G + + L K       +  
Sbjct: 95  DPSVLIPRPETEELVEQVILDNADK-----KIKILDIGTGSGCIAVTLRKHLKKASVIAT 149

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVD 181
           DIS +AL  A+ NA  N  +     +Q+D          +  + DVIVSNPPYI+     
Sbjct: 150 DISAEALVTARRNAKRNNTT--VTFIQTDILDPEKAEMDIPFILDVIVSNPPYIKEEEKK 207

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P ++L     D L +Y  IA    + L ++G    EI       VV + E
Sbjct: 208 DMERNVLDYEPHLALFVPDNDPLLYYWHIAHFGKKKLRRNGRLYFEINAACSNMVVEMLE 267

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   +D  G DR++   +
Sbjct: 268 EEGYKNIELIQDLSGRDRIIKARK 291


>gi|120601500|ref|YP_965900.1| HemK family modification methylase [Desulfovibrio vulgaris DP4]
 gi|120561729|gb|ABM27473.1| [protein release factor]-glutamine N5-methyltransferase
           [Desulfovibrio vulgaris DP4]
          Length = 295

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   LC    L    +++ PD ++++      +  + R    E +  I+G ++F+     
Sbjct: 34  AEIILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFA 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PRPETE L+++AL             R +D GTG+G + + L  E     G+ 
Sbjct: 94  VNPSTLIPRPETEHLIETALESLRS-----GPARFVDAGTGSGCIAVTLCAERADLSGLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +D+S  AL  A  NA  +GV++R   ++ D+ +S+   G  D+  SNPPYI       L 
Sbjct: 149 LDMSAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISKAEYTGLS 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EVRDF+PR +L  G  GL H   I    +R L   G+  +E G  Q  D+  +F     
Sbjct: 209 REVRDFEPRSALVPGDTGLEHATAIIAEATRVLRPHGILLMEFGCTQGADMASLFTPYST 268

Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264
              +V   +D  G DR +   R
Sbjct: 269 LWEMVEVRRDLAGLDRFIFARR 290


>gi|256820610|ref|YP_003141889.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
           7271]
 gi|256582193|gb|ACU93328.1| modification methylase, HemK family [Capnocytophaga ochracea DSM
           7271]
          Length = 281

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 124/255 (48%), Gaps = 8/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L      S   ++ + D++L +     +  AI      + I  ILG  +F++ R  ++
Sbjct: 29  ILLEHYGKYSKATILANSDTLLTEDIAQPILQAIRELQTAKPIQYILGETEFFSNRFFVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE LVD  L       +K + ++ILD+GTG+G + ++L K  P      +D
Sbjct: 89  ENVLIPRPETEELVDWVLQ---EYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAID 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S +AL++AK NA  N V   F  LQ D     ++   +D+I+SNPPY+  +    +   
Sbjct: 146 VSEEALKVAKRNAELNSVVTHF--LQQDILRIETLSDKYDIIISNPPYVRELEKKEIHHN 203

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L     + L  Y  IA    + LN +G    EI      ++  + E +   
Sbjct: 204 VLEYEPHLALFVPDNNPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMQTLLEQKHFT 263

Query: 246 LVNAFKDYGGNDRVL 260
            +   +D  GNDR++
Sbjct: 264 EITLRQDLFGNDRMI 278


>gi|312112636|ref|YP_003990952.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y4.1MC1]
 gi|311217737|gb|ADP76341.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y4.1MC1]
          Length = 288

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 7/264 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC    ++  Q++      +D+  R      I +   +H  +  + G+  FY  
Sbjct: 24  RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHAYEHVPVQHLTGFEQFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETE LV+  L        +   V ++D+GTG+GA+ + L  E+P   
Sbjct: 84  LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              +DIS +AL++A+ NA   G       +  D    +       DV+VSNPPYI    +
Sbjct: 144 VTAIDISAEALQMAEQNAKRLGAD--VAFICGDLLQPLIEANRKVDVVVSNPPYIPEDEI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D +P  +L GG DGL  YR++   +   L +  L + E+G  Q   V  +  
Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAMLR 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263
                  V    D  G DR++   
Sbjct: 262 KTFPHAKVEVVFDINGKDRMVYAT 285


>gi|15602421|ref|NP_245493.1| hypothetical protein PM0556 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|18202825|sp|Q9CN82|HEMK_PASMU RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.PmuHemKP
 gi|12720822|gb|AAK02640.1| HemK [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 298

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 96/271 (35%), Positives = 138/271 (50%), Gaps = 16/271 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S   L  VT  S   ++   ++VL + +   L   ++R  K E I  ILG + F+++ L
Sbjct: 29  ESVLLLQTVTKRSKASILAFSETVLTEVELQQLAQLLMRRAKGEPIAYILGEKAFWSLSL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALL------ 116
            +S  T  PRP+TE+LV+ AL F+  R+    V   + ILDLGTGTGA+ LAL       
Sbjct: 89  KVSEHTLIPRPDTEVLVEHALDFAKQRVTSAHVSGELSILDLGTGTGAIALALAAELTPL 148

Query: 117 --KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNP 172
             K       +GVD   +A+ +AK NA  N +  + + LQS WF ++  E  FD+IVSNP
Sbjct: 149 TQKCGINLNILGVDRIAEAVALAKDNAKQNEL--KVNFLQSVWFDALNPEIRFDLIVSNP 206

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+         +VR F+P  +L    +G +  R I +     L   G   +E G+ Q 
Sbjct: 207 PYIDKNDPHLTQGDVR-FEPLSALVAAEEGYADIRHIIEQAPLFLKPQGALLLEHGWQQA 265

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             V  IF+      V   KDY GN+RV L C
Sbjct: 266 EKVRSIFQKNLWHNVATLKDYSGNERVTLGC 296


>gi|114567902|ref|YP_755056.1| peptide release factor-glutamine N5-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|114338837|gb|ABI69685.1| peptide release factor-glutamine N5-methyltransferase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 282

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  V   +   +    D  ++  +R      I R +K E +  I+G ++F 
Sbjct: 25  EPRLEAEVLLAHVLLQNRVYLYTHFDKPVNQEERQQYREVIKRRIKGEPLAYIVGHKEFM 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   L+     PRPETELLV+ AL  +    E ++ +RI D+GTG+GA+ ++L    P 
Sbjct: 85  SLEFKLNQAVLIPRPETELLVEEALEIA----EGKEGLRICDVGTGSGAIAVSLAFYVPT 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +    DIS  ALE A+ NA  +GV+      Q D    +  E  FD+IV+N PYI S  
Sbjct: 141 AQVYATDISADALEKARENATRHGVA--ITFYQGDLLFPLLNEEPFDIIVANLPYIGSKE 198

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L   V+D++P ++L    DGL  YR +    +  L  +G   +EIG+ Q      + 
Sbjct: 199 FILLDSGVKDYEPALALLAPGDGLDLYRRLLPQAAALLAPEGCLLLEIGHEQGSRAREMM 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +          KD  G DR+L   R
Sbjct: 259 Q--GWGETEIIKDLAGRDRLLKSRR 281


>gi|269468199|gb|EEZ79892.1| HemK family modification methylase [uncultured SUP05 cluster
           bacterium]
          Length = 262

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/255 (32%), Positives = 123/255 (48%), Gaps = 13/255 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L      S+  +    D  L   +   L   I +  K      + G + FY++   ++ 
Sbjct: 18  LLSLALNKSNTALYTQTDYQLTAIESKQLDTLIQQRKKGIPFAYLSGKKGFYHLDFKVTP 77

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           DT  PRPETELL+D AL       +K +   +LDLGTG+G + + L  ++P +     DI
Sbjct: 78  DTLIPRPETELLIDIALDLFN---DKEEPCHLLDLGTGSGIIAITLADKNPHWTVSATDI 134

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL++AK+N        +    Q  WF +V    FD+I+SNPPYIE         +  
Sbjct: 135 SQAALDVAKTNTTA-----QVSFFQGSWFEAVPSQTFDLIISNPPYIEQDDPYL---DDL 186

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P+ +L  G DGL+  R I      HLNK G   +E G++Q+  +V +  + K   + 
Sbjct: 187 LFEPQTALVSGEDGLNDIRIIISDAPEHLNKGGYLLLEYGFDQQERIVDLL-NEKFHHIK 245

Query: 249 AFKDYGGNDRVLLFC 263
            FKDY  NDR +L  
Sbjct: 246 TFKDYNNNDRAVLAQ 260


>gi|16801747|ref|NP_472015.1| hypothetical protein lin2686 [Listeria innocua Clip11262]
 gi|16415222|emb|CAC97912.1| lin2686 [Listeria innocua Clip11262]
          Length = 283

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL+  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV +A AF    +++  +  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK N++      RF   D L+S  F      FD+IV+NPPYI       +
Sbjct: 141 SDISAAALAIAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S 
Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHATVLIHKDINSKDRYV 276


>gi|313617101|gb|EFR89653.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria innocua FSL S4-378]
          Length = 283

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL+  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLTRSELWMEMSRELEPNHEKQFQEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV +A AF    +++  +  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELVATAEAF----LKQHPLRSLLDVCTGSGIIAIALKKAFPDMTVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK N++      RF   D L+S  F      FD+IV+NPPYI       +
Sbjct: 141 SDISAAALAIAKKNSLLLNADVRFVETDLLES--FKQNNERFDMIVANPPYISEAEKAEM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P I+L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S 
Sbjct: 199 SDYVLKNEPSIALFAENDGLAIYERFVDNLKYVLNPSFWVGVEIGYTQGERVKQLFEKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHATVLIHKDINSKDRYV 276


>gi|269926537|ref|YP_003323160.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790197|gb|ACZ42338.1| modification methylase, HemK family [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 283

 Score =  256 bits (654), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 7/260 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               DS   L  V G+    ++ + +  +    +      + R  +HE I  ILG+++FY
Sbjct: 22  NPSLDSELLLASVLGIDRTSLLANLNQEVSLPDQEKFLGLVERRSRHEPIAYILGYKEFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S     PRPETE+LVD A   +           + D+GTG+GA+ +++  E P 
Sbjct: 82  GRLFCVSRSVLIPRPETEMLVDLAKKLAT------KGAVVADVGTGSGAIAISIAIERPD 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K V  DIS  AL++A+ N   +GV +R   LQ +    V  + D++V+N PYI     D
Sbjct: 136 VKVVATDISHDALDVARRNVQKHGVQDRVFLLQGNLLDPVHEMVDMVVANLPYIPESEAD 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFE 240
            L  +V  ++PR +L GG DGL + R +   + +H +    C +E+       +   I  
Sbjct: 196 SLQPDVILWEPRTALFGGEDGLEYIRELLGQLPKHCSYGAYCLLEVDPRLVDKLKHEIKL 255

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   +D  G  RV+
Sbjct: 256 RFPDASIVVLQDLAGLPRVV 275


>gi|171779353|ref|ZP_02920317.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281970|gb|EDT47401.1| hypothetical protein STRINF_01198 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 276

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 77/247 (31%), Positives = 123/247 (49%), Gaps = 8/247 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            S    I+  +  + +  +  L + + +   H S   I G   F ++ L +      PRP
Sbjct: 34  WSLLDFILHQNKEVTESDQKILESIMAQLEDHRSPQYITGKAYFRDLELAVDERVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  L  +      +  +R+LD+GTG+GA+ ++L    P ++    DIS  AL++
Sbjct: 94  ETEELVDLVLKEN-----SKADLRVLDIGTGSGAIAISLKSARPDWQVTASDISQGALQL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ N+  N VS   D ++SD F  + G FDVI+SNPPYI     D +G+ V   +P ++L
Sbjct: 149 AEENSKLNQVS--LDFVESDVFGQITGTFDVIISNPPYIAYGDKDEVGMNVLASEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DG + YR I +G   HL+++G    EIGY Q   +  +         +   +D  G
Sbjct: 207 FADEDGFAIYRQIIEGAGEHLSENGKLYFEIGYKQGDGLRALLSKHFPQKRIRVLEDIFG 266

Query: 256 NDRVLLF 262
            DR ++ 
Sbjct: 267 KDRKVVM 273


>gi|319648108|ref|ZP_08002325.1| YwkE protein [Bacillus sp. BT1B_CT2]
 gi|317389743|gb|EFV70553.1| YwkE protein [Bacillus sp. BT1B_CT2]
          Length = 288

 Score =  255 bits (653), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 119/268 (44%), Gaps = 13/268 (4%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +   L     +   +++     V+ +        ++    +   +  I G  
Sbjct: 17  EAGRDRNAAEILLTDQLNIDRSKLLASFHDVISESDFARFKKSVELHHQGVPVQYITGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY  + +++     PRPETE +V++ L+ +       D ++ +D+GTG+GA+ + L  E
Sbjct: 77  SFYGRKFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVDVGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
           SP F     DIS +AL  A+ NA   G   + D L  D    +   +   DVIVSNPPYI
Sbjct: 137 SPRFSVTATDISEQALSTARHNADRLGA--KVDFLCGDLLEPLIARQKKADVIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+     +   +    L   EIG+ Q   V
Sbjct: 195 SEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQALVVFEIGWTQGNAV 254

Query: 236 VRIFESRKLF---LVNAFKDYGGNDRVL 260
             +F   + F    V   KD  G DR++
Sbjct: 255 KDMF--HRFFPDADVRVKKDLNGKDRIV 280


>gi|309800292|ref|ZP_07694465.1| HemK protein [Streptococcus infantis SK1302]
 gi|308116076|gb|EFO53579.1| HemK protein [Streptococcus infantis SK1302]
          Length = 278

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            +S    +      + + ++ F+     +   H     I+G  +F+ ++L +      PR
Sbjct: 33  NISFTDFVFALQQEVTEEEKEFVEEIYTKLANHIPAQYIIGHAEFFGMQLEVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +       + +++LD+GTG+GA+ LAL K  P +     DIS  AL+
Sbjct: 93  PETEELVELILAEN-----PEENLKVLDIGTGSGAIALALAKNRPDWTITAADISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA   G++     ++S+ FS +   +D+IVSNPPYI  V    +GL V   +P ++
Sbjct: 148 LAMENADNLGLT--LFFIKSNCFSEISSKYDIIVSNPPYISRVDEAEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +LN  G   +EIGY Q   V  +F+       V   KD  
Sbjct: 206 LFADEDGLAIYRRIAEESKDYLNDGGKIYLEIGYKQGQSVPALFKKNFPEKRVRTLKDQF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GQDRMVVI 273


>gi|162456339|ref|YP_001618706.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56']
 gi|161166921|emb|CAN98226.1| putative methyltransferase HemK [Sorangium cellulosum 'So ce 56']
          Length = 294

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 6/260 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L +V G+    +++D +  LD  +         R    E +  +LG R+FY 
Sbjct: 34  ARLDAELLLGKVLGIDRVGLLIDAERPLDRAELAAYRELHQRRRAGEPVAYLLGVREFYG 93

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRP+TE+LV+ ALA +          R+LDL TG+G V ++L  E P  
Sbjct: 94  RPFRVDPRVLIPRPDTEILVEVALARTRHLALS---ARVLDLCTGSGCVAISLACERPTS 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           + +GVDIS  AL +A+ NA+  G +     L+SD F+ V     +D+I +NPPYI    V
Sbjct: 151 RVLGVDISDGALAVARENALRLG-AVNAGFLRSDLFAGVPSGLRYDLITANPPYIPDEDV 209

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L +++R ++P ++L GG DGL   R I  G    L   G+ ++E+   +   V  +F 
Sbjct: 210 AALQIDIRGYEPHLALAGGPDGLVFTRRIVAGAPALLAAGGVLAMEVEAGKAGAVAELFT 269

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V+   DYGG++RV+
Sbjct: 270 AAGFGGVSRHLDYGGHERVV 289


>gi|254180489|ref|ZP_04887087.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1655]
 gi|184211028|gb|EDU08071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia pseudomallei 1655]
          Length = 285

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 123/261 (47%), Gaps = 11/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S  Q+I   D  LD   R        R    E I ++ G R+F+ +
Sbjct: 22  ALDARILLAHALGWSRTQLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGL 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETELLV++AL      I+      +LDLGTG+GA+ +++  E P   
Sbjct: 82  EFDITPDVLIPRPETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDAC 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
              ++ S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI  
Sbjct: 138 VWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIAR 197

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  
Sbjct: 198 HDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRA 256

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + ++     V +  D    +R
Sbjct: 257 LLDAAGFADVESRADLASIER 277


>gi|312127876|ref|YP_003992750.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311777895|gb|ADQ07381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 288

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   + ++  +   +VI++    +   +   + NAI + L+   +        F  +   
Sbjct: 34  ALMMVSQILDIDKTEVILNKGLPVGQDKYEKIVNAISKYLQDYPLQYCTNKAFFMGLEFY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K     K + 
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCKVLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  R   ++S+ F  +      D I+SNPPYI       L 
Sbjct: 149 VDISERALEVARKNAKLNGVENRISFVRSNLFEDIPKNLRLDAILSNPPYISESERFKLE 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +V   +P I+L    DGL  ++ IA+    +L   G    E+G++Q  +V RI E    
Sbjct: 209 KQVLK-EPHIALFSKEDGLWFFKEIANKAKLYLKDGGYIIFEVGFSQAEEVKRILEQNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             + + KD    +R +  
Sbjct: 268 ENIKSRKDLNNIERCIFA 285


>gi|258406202|ref|YP_003198944.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfohalobium retbaense DSM 5692]
 gi|257798429|gb|ACV69366.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfohalobium retbaense DSM 5692]
          Length = 300

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +     +S  ++ +  D  +   +   +   + R  K E +  I+G ++FY 
Sbjct: 35  ARLDAEILVADALSVSRLELYLQHDRWIQAEELRRIAIRLERRSKFEPVAYIVGCKEFYG 94

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRPETE ++D+   +  P      + R  D  TG+G + + L    P  
Sbjct: 95  LDFHVRPGVLIPRPETETIIDAVREWFTP----ESIFRFADTCTGSGILGVVLATYFPRS 150

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVD 181
           +GV +DIS +AL IA+SN   +G+ +R   +Q D          D++V+NPPY+    V+
Sbjct: 151 QGVLIDISDEALAIARSNVQLHGLKQRLLAVQGDLLHPTARNQLDLVVANPPYLAPREVE 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR  +PR++L+GG  G    + + +   R L   G+  VE+G+ Q+  V   F  
Sbjct: 211 ETMPDVRLHEPRLALEGGDTGCLFLQRLVEQAQRALKPGGMVCVEMGWQQEQWVQGQFHG 270

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                    KD  G+DRV++  R
Sbjct: 271 PAWERTAVLKDLAGHDRVVVAHR 293


>gi|227513056|ref|ZP_03943105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus buchneri ATCC 11577]
 gi|227524271|ref|ZP_03954320.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
 gi|227083631|gb|EEI18943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus buchneri ATCC 11577]
 gi|227088502|gb|EEI23814.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus hilgardii ATCC 8290]
          Length = 288

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    + +  G S+  +++     +   Q     N + R +  E +  I+G  +FY + L
Sbjct: 30  DIDFLIQKRFGFSTTDMLIHYHDKMLSGQWLQFQNDVKRLISGEPVQYIVGQANFYGLTL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + S+   PR ETE LVD  L  +   +     +++LD+GTG+GA+ +AL    P ++  
Sbjct: 90  NVDSNVLIPRVETEELVDWILDQT--TVYTNRPLKVLDIGTGSGAIAIALKANRPEWQVN 147

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  AL++A+ NA  + V+  F  + SD F+ +   FD+IVSNPPYI +  V  +  
Sbjct: 148 ASDISESALKVAQQNAQLHHVAINF--ILSDMFAHINEAFDLIVSNPPYISASEVGDMDS 205

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKL 244
            V++ +PRI+L    DGL+ Y+++A GV  HLN  G   VEIG++Q+  V +IF E+   
Sbjct: 206 SVKNNEPRIALFAADDGLAIYKSLAKGVDAHLNVGGQLFVEIGFHQETSVRKIFQEALPN 265

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
            +V A  D  G+ R++   +
Sbjct: 266 AIVTAKHDVSGHQRMVRLRK 285


>gi|312795902|ref|YP_004028824.1| peptide release factor-glutamine N5-methyltransferase [Burkholderia
           rhizoxinica HKI 454]
 gi|312167677|emb|CBW74680.1| Peptide release factor-glutamine N5-methyltransferase (EC 2.1.1.-)
           [Burkholderia rhizoxinica HKI 454]
          Length = 321

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 36/293 (12%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  V       +I   D  L +           R ++ E I +++G R+F+ 
Sbjct: 34  APLEARILLAHVLDWPRTALITRADDTLPNALSARFLALQARRVEGEPIAQLVGSREFFG 93

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETELLV+ AL      ++     RILDLGTG+GA+ +A+    P  
Sbjct: 94  LDFDVTPHVLIPRPETELLVECALN----AVQTIPSPRILDLGTGSGAIAIAIAHTRPDA 149

Query: 123 KGVGVDISCKALEIAKSNAVTN------------------------GVSERFDTLQSDWF 158
           + V  D    AL++A+ NA                               R       WF
Sbjct: 150 RIVATDRCAGALDVARRNARRLLGDAALAPALPVSAARHDFVTSGTPTQPRLALRHGTWF 209

Query: 159 SSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            ++          FD IVSNPPYI +        ++R F+P  +L    DGLS  R I  
Sbjct: 210 DALSEPHRLAPARFDAIVSNPPYIAASDPHLREGDLR-FEPLDALTDHADGLSAIRAIVT 268

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G    L       +E GY+Q   V  + ++     V + +D  G +RV    R
Sbjct: 269 GSVAWLAPGATLWLEHGYDQAEAVRALLDAHGFDSVRSVRDLAGIERVTCGSR 321


>gi|33591872|ref|NP_879516.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
 gi|33571516|emb|CAE40990.1| heme biosynthesis protein [Bordetella pertussis Tohama I]
 gi|332381289|gb|AEE66136.1| heme biosynthesis protein [Bordetella pertussis CS]
          Length = 270

 Score =  255 bits (653), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++      V G S   ++      ++            R L  E +  +LG R+F  
Sbjct: 14  PRLEARMLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               L+ D   PRP+TELLV++AL +    ++ R   R+LDLGTG+GA+ +++    P  
Sbjct: 74  HWYALTPDVLIPRPDTELLVETALHW----LQGRAAPRVLDLGTGSGAIAVSVALGCPQA 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           +    D+S  AL +A+ NA   G   R   L  DW+ ++     +D+IVSNPPYI     
Sbjct: 130 EVTATDLSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDA 187

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L    DGL+    IA G    L   G   +E G++Q      +  
Sbjct: 188 HLAQGDLR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLR 246

Query: 241 SRKLFLVNAFKDYGGNDRV 259
              L  V++ +D  G +R+
Sbjct: 247 QAGLREVHSRRDLAGIERI 265


>gi|269215989|ref|ZP_06159843.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC
           700122]
 gi|269130248|gb|EEZ61326.1| protein-(glutamine-N5) methyltransferase [Slackia exigua ATCC
           700122]
          Length = 329

 Score =  255 bits (652), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 40/298 (13%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++    D  L   +R  L +A+ R    E +  I G   F  + L 
Sbjct: 30  AQHLLSFATGLSRIELYAHHDRPLSPDERDTLRDAVRRRAAGEPLQYIQGTAPFRFIELE 89

Query: 67  LSSDTFEPRPETELLVDSALAFSL----------------PRIEKRDVV----------- 99
           ++     PRPETE+LVD A                     P +   +             
Sbjct: 90  VAPGVLIPRPETEVLVDEAFRELKNLGAYAVRRPGPHAGEPSLPPSEGAAASGSARPGVA 149

Query: 100 -----------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                       + D+ TG+G +  A+  E P  + V  DIS  A+ +A+ N    G+ +
Sbjct: 150 AEANGTHAGGLVVADVCTGSGCIACAIASEHPDARVVATDISPDAVALARRNVARLGLGD 209

Query: 149 RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R D  + D  + +  +  FD+++SNPPY+ + +++ +  EV  F+P ++LDGG DGL  +
Sbjct: 210 RVDVREGDLCAPLAADAPFDLVISNPPYVPTAVLNDMPREVSVFEPALALDGGCDGLDAF 269

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R + D     L+  G+ + E+  +       +  S  L  V    D  G  RVL+  +
Sbjct: 270 RRLIDEAVPLLSFPGVLACELHEDCLDKAADLARSAGLARVRIASDLAGRSRVLIAAK 327


>gi|298386834|ref|ZP_06996389.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 1_1_14]
 gi|298260508|gb|EFI03377.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 1_1_14]
          Length = 278

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + G+ +  + +  D +L   ++  L N I R  K+E I  I G+ +F      ++
Sbjct: 27  LICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPET  LVD  +       E  D  R+LD+GTG+G + ++L K+ P  K    D
Sbjct: 87  PGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKKLPDAKVDAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N     +  +    + D FS+  ++G  +D+IVSNPPY+       +  
Sbjct: 141 ISEEALAIARKNNEE--LDAQVTFCRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  YR IA+     L   G    EI      D++R+ E  + 
Sbjct: 199 NVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR+L   R
Sbjct: 259 RDVRVIKDIFGKDRILTANR 278


>gi|161869127|ref|YP_001598293.1| HemK protein [Neisseria meningitidis 053442]
 gi|161594680|gb|ABX72340.1| HemK protein [Neisseria meningitidis 053442]
          Length = 234

 Score =  255 bits (652), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 85/236 (36%), Positives = 113/236 (47%), Gaps = 12/236 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           + D  R          L  E +  ILG R+FY  R T++     PRPETE LV++ LA  
Sbjct: 1   MPDEVRQRADRLAQCRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARL 60

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                  +  R+ DLGTG+GAV + +  E P       DIS  ALE A+ NA   G   R
Sbjct: 61  ------PENGRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARENAADLGA--R 112

Query: 150 FDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +     WF      EG +D+IVSNPPYIE+     L  ++R F+P+I+L    DGLS  
Sbjct: 113 VEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLR-FEPQIALTDFSDGLSCI 171

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           RT+A G    L + G   +E G++Q   V  +        V    D  G DRV L 
Sbjct: 172 RTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLG 227


>gi|256545371|ref|ZP_05472734.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398932|gb|EEU12546.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus vaginalis ATCC 51170]
          Length = 263

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 132/253 (52%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   + + + ++ +  LD++    L     +  +   +   +G  +FY + L +   
Sbjct: 18  LTYLLNTNKNLLFLNKEEALDEKIENELKIINDKINEGYPLQYAIGKWNFYGLDLLVDKR 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE+LVD  +       +  +  +ILD+GTG+GA+ LAL K     K +GVDIS
Sbjct: 78  ALIPRYETEILVDLIIN------DNSNNKKILDIGTGSGAISLALSKNLKDSKIIGVDIS 131

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A+++A  N +   +    +  +SD FS++E  FD+IVSNPPYI     + L  ++  +
Sbjct: 132 KNAIDLANENKIKLNI-NNVEFKESDIFSNIEEKFDIIVSNPPYINKEDFEKLDNKLY-Y 189

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L GG DGL  Y+ I       LNK+G   +EIGY+QK  +  + E      + ++
Sbjct: 190 EPQNALYGGEDGLYFYKKIIKNAKNFLNKNGKIYLEIGYDQKDYISNLLEEYGYKQIKSY 249

Query: 251 KDYGGNDRVLLFC 263
           KD+   DR++  C
Sbjct: 250 KDFNDFDRIIKAC 262


>gi|167762047|ref|ZP_02434174.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
           43183]
 gi|167700139|gb|EDS16718.1| hypothetical protein BACSTE_00395 [Bacteroides stercoris ATCC
           43183]
          Length = 303

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 113/267 (42%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R    E I  + G   F 
Sbjct: 45  EAANLSRIVCCEMLGQTAVDYYLGKDMILSPKEMQDLDTILARLRNFEPIQYVQGTARFL 104

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 105 ERSYYVAPGVLIPRPETEELVEVMLK------EVPSGARILDIGTGSGCIAISLSKMLPD 158

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178
            K    DIS  AL IA+ N      S  F  +Q D  + V G    +DVIVSNPPY+   
Sbjct: 159 AKVTAWDISDTALRIARRNNEALQASVCF--VQRDVLAYVPGSGERYDVIVSNPPYVTES 216

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR IA+     L   G    EI          
Sbjct: 217 EKQEMERNVLDWEPFSALFVPDNDPLLFYRRIAELGKGMLASGGRLYFEINRAFGEATAT 276

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  ++    +   KD  GNDR+++  R
Sbjct: 277 MLRAQGYTNLRVLKDISGNDRIVIAER 303


>gi|23015679|ref|ZP_00055448.1| COG2890: Methylase of polypeptide chain release factors
           [Magnetospirillum magnetotacticum MS-1]
          Length = 283

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 3/259 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           DS      V G+   ++     + L       L   + R    E +  ILG R F+    
Sbjct: 26  DSRLMAAEVLGVEMRRLPASHHAELSPEDAARLAAMLDRRAAREPMSHILGRRGFWTHDF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ DT +PRP+TE L+++ L     R      +R++D GTGTG + L LL E     G+
Sbjct: 86  LVTKDTLDPRPDTETLIEAVLGALDDR---GRPLRLVDFGTGTGCILLTLLSELGHATGL 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D S  AL +A  NA   G++ R      DW   ++G+FD+IVSNPPYI    +D L  
Sbjct: 143 GIDASEAALAVAGDNAERLGLASRAQFRLGDWGWGLDGVFDIIVSNPPYIPDGDIDGLEP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV  ++PR +L GG DGL  YR +   ++R L   GL ++E+G  Q  DV  +  +  L 
Sbjct: 203 EVSRYEPRSALAGGADGLDCYRALIPHMARLLVPGGLAALEVGAGQASDVAAMLAAAGLP 262

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                 D GG +R ++  R
Sbjct: 263 GAGFRCDLGGIERCVIVQR 281


>gi|120434996|ref|YP_860682.1| modification methylase HemK [Gramella forsetii KT0803]
 gi|117577146|emb|CAL65615.1| modification methylase HemK [Gramella forsetii KT0803]
          Length = 282

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 116/257 (45%), Gaps = 5/257 (1%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                  G+    + ++P   +   ++    +A+ R  KHE I  I G  +F+  +  ++
Sbjct: 29  ILTEEYLGMQKVDIALNPTQEISKEEQTKFESALNRLKKHEPIQYITGNTEFFTRKFLVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV+  ++           ++ILD+GTG+G + ++L KE    K    D
Sbjct: 89  KSVLIPRPETEELVEWIIS---DHRSTGQELKILDIGTGSGCIPISLAKELEDAKVSSFD 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           IS +AL IAK NA  N     F  L       +EG FD+IVSNPPY+  +    +   V 
Sbjct: 146 ISSEALLIAKRNAKLNAADVLFRKLNILEAEELEGQFDIIVSNPPYVRELEKKEMHQNVL 205

Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D +P+++L     + L  Y+ IA+   + LN  G    EI      +   + +       
Sbjct: 206 DHEPKLALYVEDENALIFYKKIAELAVKSLNPAGCLYFEINQYLAEETKSLVQQFGFET- 264

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G+ R+L   +
Sbjct: 265 ELKKDIFGHYRMLKATK 281


>gi|225849652|ref|YP_002729886.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Persephonella marina EX-H1]
 gi|225646153|gb|ACO04339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Persephonella marina EX-H1]
          Length = 280

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 122/260 (46%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  L   ++I + +  +   +     + I R  + E +  I G + FY +  
Sbjct: 25  DTQILLSYVLKLPRWKLITEREEEIPKEKVMEFFSLIERRAQREPLAYITGEKAFYGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE+LVD  L     RI +   V  L++G G+G + ++LLK        
Sbjct: 85  KIKKGVLIPRPETEILVDEVLK----RIPEDKRVLGLEIGVGSGVISISLLKYRHNLFMY 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
           GVDIS KALE+ + NA  + VS R   L+SD F  V    FD IVSNPPY+ +     L 
Sbjct: 141 GVDISEKALELTRENAKIHRVSSRLKLLKSDLFKDVPHIKFDFIVSNPPYVSAEEYAGLE 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+      +L GG  G+  Y  I      +L + G    EIGY Q   V +I +    
Sbjct: 201 EEVKKEP-VEALIGGKGGIEFYERIVKEGKIYLKEKGFFGFEIGYTQSDRVKKILQDEGF 259

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V  +KD    DRV++  R
Sbjct: 260 -NVKVYKDLQDYDRVVIGER 278


>gi|52082234|ref|YP_081025.1| YwkE protein [Bacillus licheniformis ATCC 14580]
 gi|52787626|ref|YP_093455.1| YwkE [Bacillus licheniformis ATCC 14580]
 gi|52005445|gb|AAU25387.1| YwkE [Bacillus licheniformis ATCC 14580]
 gi|52350128|gb|AAU42762.1| YwkE [Bacillus licheniformis ATCC 14580]
          Length = 288

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 13/268 (4%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +   L     +   +++     V+ +        ++    +   +  I G  
Sbjct: 17  EAGRDRNAAEILLTDQLNIDRSKLLASFHDVISESDFARFKKSVELHHQGVPVQYITGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY    +++     PRPETE +V++ L+ +       D ++ +D+GTG+GA+ + L  E
Sbjct: 77  SFYGREFSVNEHVLIPRPETEEVVEAVLSEAERVFHGTDRLKAVDVGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
           SP F     DIS +AL  A+ NA   G   + D L  D    +   +   DVIVSNPPYI
Sbjct: 137 SPRFSVTATDISEQALSTARHNADRLGA--KVDFLCGDLLEPLIARQKKADVIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+     +   +    L   EIG+ Q   V
Sbjct: 195 SEEDMRTLSDVVRLHEPAGALTDGADGLQFYKRFMKEIPSVIADQALVVFEIGWTQGNAV 254

Query: 236 VRIFESRKLF---LVNAFKDYGGNDRVL 260
             +F   + F    V   KD  G DR++
Sbjct: 255 KDMF--HRFFPDADVRVKKDLNGKDRIV 280


>gi|254450152|ref|ZP_05063589.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Octadecabacter antarcticus 238]
 gi|198264558|gb|EDY88828.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Octadecabacter antarcticus 238]
          Length = 268

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 132/263 (50%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             +RD+   +     +   ++ +      +D         I +      +  +LG+RDFY
Sbjct: 13  DPVRDARVLMAACLDIPFGRLTLHAHDEFEDAPEAAFFADIGQRAARTPVSHLLGYRDFY 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ D  +PR +TE L+++ALA             +LDLGTG+G + + LL E   
Sbjct: 73  GRRFQVTPDVLDPRGDTETLIEAALAV--------PFADVLDLGTGSGCILVTLLAERGA 124

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S +A+ +A+ NA+  GV +R     SDWF  V   FD+IVSNPPYI    + 
Sbjct: 125 VTGIGVDVSPRAVTVAEQNALRLGVQDRCAFAVSDWFKGVGVPFDLIVSNPPYIALDEMA 184

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E   ++PR++L    DGL+ YR I  G + HL + G   VEIG  Q   V+ +FE 
Sbjct: 185 GLAPE-LGYEPRLALTDEGDGLAAYREITAGAAGHLRQGGWLMVEIGPTQGGAVIALFEV 243

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V    D  G DRV++  +
Sbjct: 244 AGLEQVGIRVDLDGRDRVVVGKK 266


>gi|295400674|ref|ZP_06810651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977255|gb|EFG52856.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 288

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 7/264 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC    ++  Q++      +D+  R      I + + +H  +  + G+  FY  
Sbjct: 24  RAAELLLCHHLRITRAQLLARLRDPIDENARQLFEEDICKHVYEHVPVQHLTGFEQFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ D   PRPETE LV+  L        +   V ++D+GTG+GA+ + L  E+P   
Sbjct: 84  LFLVNRDVLIPRPETEELVEGVLTRITQLFPRNTTVDVVDVGTGSGAIAITLALENPALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              +DIS +AL++A+ NA   G       +  D    +       DV+VSNPPYI    +
Sbjct: 144 ITAIDISAEALQMAEQNAKRLGAD--VAFICGDLLQPLIEANRKVDVVVSNPPYIPEDEI 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D +P  +L GG DGL  YR++   +   L +  L + E+G  Q   V  +  
Sbjct: 202 ASLSPVVKDHEPLRALAGGKDGLDFYRSLTRALPFVLRERALVAFEVGAGQGETVAAMLR 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263
                  V    D  G DR++   
Sbjct: 262 KTFPHAKVEVVFDINGKDRMVYAT 285


>gi|289435804|ref|YP_003465676.1| modification methylase, HemK family [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289172048|emb|CBH28594.1| modification methylase, HemK family [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 283

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 114/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  +  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAIALKKAFPKVLVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK NA+      RF  +++D   S +     FD++++NPPYI       +
Sbjct: 141 SDISSPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAAM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S 
Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHSTVVIHKDINSKDRYV 276


>gi|298208448|ref|YP_003716627.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus
           HTCC2559]
 gi|83848371|gb|EAP86240.1| putative protoporphyrinogen oxidase [Croceibacter atlanticus
           HTCC2559]
          Length = 282

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 7/257 (2%)

Query: 9   SFLCRV-TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
             L      +S   ++++PD+V+        T A  R    E I  I+G  +F+++   +
Sbjct: 28  VLLSEAYLKMSRLDIVMNPDTVVSAAILANFTEAFKRLKVFEPIQYIIGETEFFDLNFKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PRPETE LV   +       + +  + +LDL TG+G + ++L K         +
Sbjct: 88  TPDVLIPRPETEDLVRWIIQD-----QHKTNLDVLDLCTGSGCIAISLSKYLKDATVSAL 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL IAK NA  N  +  F         S+   +DVIVSNPPY+ ++  D +   V
Sbjct: 143 DISTSALAIAKENAENNNTNIHFLLKDILASDSLPQHYDVIVSNPPYVRNLEKDLMSNNV 202

Query: 188 RDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +P ++L    D  L  Y  I      HL  +G   +EI          + +S     
Sbjct: 203 LEHEPHLALFVEDDNPLIFYNKIISLSKTHLKPNGTLYLEINEFLGEATQALLDSDSFTN 262

Query: 247 VNAFKDYGGNDRVLLFC 263
           +   KD  G DR+L   
Sbjct: 263 IELKKDIFGKDRMLKAT 279


>gi|328555407|gb|AEB25899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus amyloliquefaciens TA208]
 gi|328913778|gb|AEB65374.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           LL3]
          Length = 286

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A R+   +   L   TG+   +++ +    + + + +     +    +   I  I+G  
Sbjct: 17  EAGREKNAAELLLLNDTGMDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        + + + ++D+GTG+GA+ + L  E
Sbjct: 77  QFYGREFFVNDDVLIPRPETEEVVFHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
              F     DIS +AL++A+ NA   G   RF  LQ D  +         D+IVSNPPYI
Sbjct: 137 CGHFSVAASDISKEALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + +   +    L   EIGYNQ   V
Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAV 254

Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260
             +F  S     V   KD  G DR +
Sbjct: 255 EDLFRHSFPNAEVEVVKDINGKDRTV 280


>gi|317121005|ref|YP_004101008.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter marianensis DSM 12885]
 gi|315590985|gb|ADU50281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter marianensis DSM 12885]
          Length = 295

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 10/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L     L   +V+ +PD  L           I+R  + E +  IL   +FY
Sbjct: 31  EARASARVLLGAALDLPGARVVAEPDLPLPPAAWARFVQWILRRARREPVAYILQQAEFY 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++  T  PRPETE+LV+  L     R        + DLGTGTG V + L  E P 
Sbjct: 91  GRPFRVTPATLIPRPETEVLVEVVL-----RTVPAGPAVVADLGTGTGIVAVTLAAERPA 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIE 176
           +  +  D S  AL++A+ NA  +GV  R      DW   +      G    + SNPPY+ 
Sbjct: 146 WTVLASDCSAAALKVARENAARHGVDGRMRFYVGDWAEPLLAAGWAGKLAAVASNPPYVA 205

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  E+  ++P ++L  G  GL  YR +  G  R L   G   +E+G  Q   V 
Sbjct: 206 AADLPRLQAEIHRYEPHLALTPGATGLEAYRRLIPGAVRLLAPGGWIFLEVGAGQAPAVQ 265

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            +  +     V+ + D  G  RV+
Sbjct: 266 HLLGAVGCRCVSCWPDLAGIPRVV 289


>gi|332655313|ref|ZP_08421053.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcaceae bacterium D16]
 gi|332515818|gb|EGJ45428.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcaceae bacterium D16]
          Length = 287

 Score =  255 bits (651), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 7/264 (2%)

Query: 1   MQA-LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A   ++   +C     S  Q   D    +       +   + R L  E +  I+G  +
Sbjct: 21  IEAGQLEARELICYAADKSREQFYRDMPLYVSGEMERRVEELVQRRLAGEPVAYIVGEWE 80

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L +S+D   PR +TE+L +  +  +       +  R+LDL  G+G V LA+   +
Sbjct: 81  FYGLPLNISNDVLIPRIDTEVLAERGILRARA---AGEGARVLDLCAGSGCVGLAIAANA 137

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176
           P  + V  ++S  AL + K N   N ++ R   L  +           FDVIVSNPPYI 
Sbjct: 138 PDCRVVLGELSEGALRVCKQNVRRNELNARVTCLSVNAMEPPASSLWDFDVIVSNPPYIP 197

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  ++ L   V+D++P ++LDGG DGL  YR IA      +   G    E+G  Q  DV 
Sbjct: 198 TGDIEGLDHSVKDYEPHMALDGGADGLDFYRFIAAKWKNAIRLGGSLIFEVGIGQAPDVE 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            I        +    D  G  RV+
Sbjct: 258 NILAQNGFEQIQTTADTQGIWRVV 281


>gi|83720020|ref|YP_443438.1| hemK protein [Burkholderia thailandensis E264]
 gi|257137780|ref|ZP_05586042.1| hemK protein [Burkholderia thailandensis E264]
 gi|83653845|gb|ABC37908.1| hemK protein [Burkholderia thailandensis E264]
          Length = 285

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 121/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D  LD            R    E + ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWSRTQLITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFGLDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      I+      +LDLG G+GA+ +++    P  +  
Sbjct: 84  DVTPDVLIPRPETELLVETALD----AIDGIASPCVLDLGAGSGAIAVSIASVRPDARVW 139

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +D S  AL++A+ NA       R       L+SDW+++++    F V+VSNPPYI    
Sbjct: 140 ALDRSAAALDVARRNARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHD 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  RTI  G    +   G   +E GY+Q   V  + 
Sbjct: 200 PHLAEGDLR-FEPRGALTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALL 258

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E+     V +  D    +R  
Sbjct: 259 EAAGFADVESLADLASIERAT 279


>gi|307704778|ref|ZP_07641674.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597]
 gi|307621687|gb|EFO00728.1| protein-glutamine-N5 methyltransferase [Streptococcus mitis SK597]
          Length = 278

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 79/247 (31%), Positives = 119/247 (48%), Gaps = 8/247 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + +  F+     +   H+    I+G  DFY ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEEEEVFVKEIFQQLAAHKPAQYIIGQADFYGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +         + +LD+GTG+GA+ LAL K  P +     DIS  AL+
Sbjct: 93  PETEELVELILAEN-----PETNLSVLDIGTGSGAIALALAKNRPDWSVKAADISQDALD 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +  +    +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 VASENAKNQNL--QIFLKKSDCFTEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+    +L   G   +EIGY Q   V  +F        V   KD  
Sbjct: 206 LFAAEDGLAIYRRIAEDAKDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRVRTLKDQF 265

Query: 255 GNDRVLL 261
           G DR+++
Sbjct: 266 GQDRMVV 272


>gi|238023220|ref|ZP_04603646.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147]
 gi|237865603|gb|EEP66743.1| hypothetical protein GCWU000324_03147 [Kingella oralis ATCC 51147]
          Length = 275

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 118/267 (44%), Gaps = 15/267 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  +TG ++ Q+I      L   Q   L   I R    E I  ++G R+FY 
Sbjct: 14  PRNETRLLLQHITGYTASQLITRDREPLPKDQADQLHRLIARRSAGEPIAYLIGTREFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PRPETE L+++AL          +   + DLGTG+G + ++   E P  
Sbjct: 74  RAFVVSPAVLIPRPETEHLLEAALQRL------PENGVLWDLGTGSGIIAVSAKCERPDA 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIE 176
           +    DIS +AL +A+ NA            Q  WF++       +    +I SNPPYIE
Sbjct: 128 RVFASDISAEALAVAQQNAAA--WCAPVSFAQGAWFAANQVFRLPQHSVHIIASNPPYIE 185

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +        ++R ++P  +L    DGL+H R IA     +L + G   +E GY+Q   V 
Sbjct: 186 ADDPHLQQGDLR-YEPPAALTDFADGLAHIRHIAQHAPAYLRRHGWLLLEHGYDQGQAVR 244

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
            I        +   +D+ G DRV L  
Sbjct: 245 DILARFGFCQIETQQDWAGLDRVTLGR 271


>gi|77460968|ref|YP_350475.1| modification methylase HemK [Pseudomonas fluorescens Pf0-1]
 gi|77384971|gb|ABA76484.1| [protein release factor]-glutamine N5-methyltransferase
           [Pseudomonas fluorescens Pf0-1]
          Length = 276

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 8/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S   +   P+ ++           + R    E +  ILG + F+ + L ++  T  PR
Sbjct: 32  GKSRSFLHTWPERIVPSEAALVFAEYLQRRRGGEPVAYILGQQGFWKLDLEVAPHTLIPR 91

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+T       L  +   +      ++LDLGTG+GA+ LAL  E P +K   VD   +A+ 
Sbjct: 92  PDT-----ELLVEAALELLPATPAKVLDLGTGSGAIALALASERPAWKVTAVDRVLEAVA 146

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ N     +      L S WFS++EG  F++I+SNPPYI +     +  +VR F+P  
Sbjct: 147 LAERNRQRLHL-NNATVLSSHWFSALEGKRFELIISNPPYIRAADPHLMEGDVR-FEPES 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  GIDGL   R I      HL   G   +E GY+Q   V  +  ++    V++  D G
Sbjct: 205 ALVAGIDGLDDLRLIIAQAPAHLEAGGWLMLEHGYDQAEAVRDLLLTQGFDEVHSRTDLG 264

Query: 255 GNDRVLLFC 263
           G+ R+ L  
Sbjct: 265 GHQRISLGR 273


>gi|114766146|ref|ZP_01445150.1| modification methylase, HemK family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541606|gb|EAU44648.1| modification methylase, HemK family protein [Roseovarius sp.
           HTCC2601]
          Length = 282

 Score =  255 bits (651), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L  V  +   ++ +     ++          I     H  +  I G R FY
Sbjct: 21  DPGRDARRLLAHVLKVPPGRLTLFLPDPVESEHALLFNAVIESRAAHVPVSHITGRRQFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ +  +PRPETE+L+++ALA            R+LDLGTG+G + L LL E   
Sbjct: 81  GREFLVTPEVLDPRPETEILIEAALA--------GPFSRVLDLGTGSGCILLTLLCEREG 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
             G+G D+S +ALE+A  N     +  R    +  WF ++       FD+IVSNPPYI  
Sbjct: 133 ATGIGTDLSEEALEVAFWNRNALRLEARAALARGSWFGALGEDDRERFDLIVSNPPYIAL 192

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +D L  EVRD +PR++L    DGL+ YR IA G   HL   G   VEIG +Q   V  
Sbjct: 193 DEMDDLSPEVRDHEPRMALTDEGDGLTAYRMIAAGAPSHLLPGGRLMVEIGPSQGAAVAD 252

Query: 238 IFESRKLFLVNAFKDYGGND 257
           +F S  L  V    D  G D
Sbjct: 253 LFRSAGLQEVAVITDLDGRD 272


>gi|332526536|ref|ZP_08402648.1| hemK protein [Rubrivivax benzoatilyticus JA2]
 gi|332110804|gb|EGJ10981.1| hemK protein [Rubrivivax benzoatilyticus JA2]
          Length = 269

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 10/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L    G S   ++   + +L        T  + R         ++G R+F+ +
Sbjct: 17  RLDTQLLLAHRLGRSRAWLLAHDEDLLSAATATAFTADLARRAAGVPFAYLVGEREFHGL 76

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++ D   PRP+TE+LVD AL      +      R+ DLGTG+GA+ LA+    P   
Sbjct: 77  TLRVTPDVLVPRPDTEVLVDWALEL----LPPGAPARVADLGTGSGAIALAVKNARPQAS 132

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
               D S +AL +A  NA   G+    + +  +W+S + G  FD+++SNPPYI       
Sbjct: 133 LTATDRSAEALAVAADNAGRLGLE--IEFVHGEWWSPLAGRRFDLVLSNPPYIAGADPHL 190

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +PR +L    DGL   R I      HL   G   +E GY+Q   V  +    
Sbjct: 191 T---ALQHEPRGALTPEGDGLDALRAIVSAAQAHLEPGGWLLLEHGYDQADAVQALLAGA 247

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V+  +D GG  R     R
Sbjct: 248 GFTQVSTRRDLGGQPRCTGGRR 269


>gi|257870910|ref|ZP_05650563.1| modification methylase HemK [Enterococcus gallinarum EG2]
 gi|257805074|gb|EEV33896.1| modification methylase HemK [Enterococcus gallinarum EG2]
          Length = 278

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 86/254 (33%), Positives = 128/254 (50%), Gaps = 9/254 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            FL R         ++  D  +    +  +   + + L H     +LG+ +FY  R  ++
Sbjct: 29  LFLAR-KNWQKLDWLLHMDQQISPADKVQIEADLQQLLAHRPPQYLLGYEEFYGHRFKVT 87

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PRPETE LV    A  L + E  + +R++D+GTGTGA+ ++L    P ++   VD
Sbjct: 88  EDTLIPRPETEELV----ALCLEQTEPAENLRVVDIGTGTGAIAVSLKLARPHWQIAAVD 143

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  AL +AK NA   G        Q D  + V +  +D+IVSNPPYI     + +   V
Sbjct: 144 LSEAALAVAKENAAQLGAE--VAFYQGDTLTPVGDQSWDIIVSNPPYISEQEWELMDASV 201

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFL 246
           R F+P+++L    +GL  YR IAD   + L  DG   VEIG+ Q   V RIF E+     
Sbjct: 202 RQFEPQMALFAAENGLVMYRKIADQAKKLLTPDGKIFVEIGFQQGKSVQRIFAEAFPDKK 261

Query: 247 VNAFKDYGGNDRVL 260
           V   +D  G DR++
Sbjct: 262 VTVIQDLSGKDRLV 275


>gi|212695384|ref|ZP_03303512.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
 gi|212662019|gb|EEB22593.1| hypothetical protein BACDOR_04933 [Bacteroides dorei DSM 17855]
          Length = 278

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   
Sbjct: 25  AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V 
Sbjct: 85  VNKHVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVS 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   
Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +       
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   +
Sbjct: 260 NIELRKDLFQNDRMIKAKK 278


>gi|126653460|ref|ZP_01725556.1| modification methylase, HemK family protein [Bacillus sp. B14905]
 gi|126589816|gb|EAZ83949.1| modification methylase, HemK family protein [Bacillus sp. B14905]
          Length = 286

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  + G S  +V++     L + Q+      I   +    +   +G  +FY     
Sbjct: 28  ARIVMQHILGTSYSEVMLHLQDKLTEEQQVKFKALIEEHVNGRPVQYCVGSEEFYGRSFI 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE L+       + ++ +   +++ D+GTG+GA+ +++  E P    V 
Sbjct: 88  VDESVLIPRPETEELI-LGTINRMTKLFQHQALKVADIGTGSGAIAISMKLECPALTVVA 146

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            D+S  AL  A+ NA         D    D  + + G  FD+I+SNPPYI     + +  
Sbjct: 147 TDLSEDALATAQKNAQRLEAD--IDFRLGDLTAPLAGEKFDIILSNPPYIAFDEAEAMSD 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P  +L    DGL  YR +A+ +  ++NK  L  +EIGY Q   V + F+     
Sbjct: 205 VVLKHEPHSALFAEEDGLILYRQLAEQLPMYMNKPALIGLEIGYTQGEKVAKFFQDSFPQ 264

Query: 245 FLVNAFKDYGGNDRVLL 261
             ++  KD  G  R++ 
Sbjct: 265 ATISIEKDINGKPRMIF 281


>gi|225156035|ref|ZP_03724518.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutaceae bacterium TAV2]
 gi|224803268|gb|EEG21508.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutaceae bacterium TAV2]
          Length = 338

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 82/316 (25%), Positives = 119/316 (37%), Gaps = 54/316 (17%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +    GL   Q+ +  +  L + +   +   + R    E +  ILG  ++  
Sbjct: 23  PRLDAEWLVGHALGLKRMQLYMQFERPLKESELDLIRPLVRRRGAREPLQHILGTVEWCG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALA--------------------FSLPRIEKRDVVRIL 102
           + L        PRPETE LV+  +A                     S P        RIL
Sbjct: 83  LTLKTDRRALIPRPETEYLVELIIAKLHPSRASISSTASDVGRSAQSAPPPSVAAPSRIL 142

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DLGTGTGA+ LAL    P      +D S  AL +A+ NA    +  R   ++S+WFS++ 
Sbjct: 143 DLGTGTGAIALALATHFPKAAVTALDASDDALALARENAAALALDARVTFVKSNWFSALP 202

Query: 163 ----------------------------------GLFDVIVSNPPYIESVIVDCLGLEVR 188
                                              LFD+IVSNPPY+          EVR
Sbjct: 203 PPPPPAATDTDISSTALDVGRSTLDVGRSAQSAAPLFDLIVSNPPYLTDAEAAAAEPEVR 262

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             DPR +L    DGL+  RT+ D     L   GL ++E G  Q   +  +  +       
Sbjct: 263 LHDPRSALVAPDDGLADLRTLIDQARARLVPGGLLALETGPTQHPALRALATACGYARHE 322

Query: 249 AFKDYGGNDRVLLFCR 264
           +  D  G +R     R
Sbjct: 323 SAPDLAGRERFFFAWR 338


>gi|254373463|ref|ZP_04988951.1| hypothetical protein FTCG_01058 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571189|gb|EDN36843.1| hypothetical protein FTCG_01058 [Francisella novicida GA99-3549]
          Length = 284

 Score =  254 bits (650), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   V  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAVTALFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTHIKTVKDLNNNDRCT 277


>gi|261420782|ref|YP_003254464.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC61]
 gi|319768452|ref|YP_004133953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC52]
 gi|261377239|gb|ACX79982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC61]
 gi|317113318|gb|ADU95810.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. Y412MC52]
          Length = 293

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 7/265 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC   G+    +       +D+         + R    H  I  ++G+  FY  
Sbjct: 24  RAAEWLLCHHLGVDRAGLFARWREPVDEAVYERFAADVRRHAVDHVPIQYLIGYESFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETE LV   L         R  + ++D+GTG+GA+ + L  E+    
Sbjct: 84  PFLVNRHVLIPRPETEELVLGVLKRVPRLFAGRKRIDVVDVGTGSGAIAVTLALENKALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
               DIS  AL +A+ NA   G       L  D    +       DV+VSNPPYI     
Sbjct: 144 VTATDISEAALAVARENARRLGA--NVSFLCGDLLQPIMAMGWTVDVVVSNPPYIPETDA 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V++++P  +L GG DGL  YR  A  +   L    L + E+G  Q   V  + +
Sbjct: 202 AMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAPALAAFEVGAGQGEAVAALLD 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
           +      V    D  G DR++   R
Sbjct: 262 AAFPEAEVEVDFDLNGKDRMVYMTR 286


>gi|193213221|ref|YP_001999174.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobaculum parvum NCIB 8327]
 gi|193086698|gb|ACF11974.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlorobaculum parvum NCIB 8327]
          Length = 294

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 8/248 (3%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
             Q+ +D +  +   +      A    L+   +  I G   FY  R  +      PRPET
Sbjct: 44  RLQLYLDHERPVTPSELGAFRAACRERLQGRPVQYIAGESFFYGYRFFVDERVLIPRPET 103

Query: 79  ELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           EL+++ A+   +   ++  D   ILD+GTG+G + + L    P  +   +D+S  ALE+A
Sbjct: 104 ELVLEHAIERLAASGLDSVDTPSILDIGTGSGCIAITLALRLPGAQVTALDVSADALEVA 163

Query: 138 KSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           + NA  +GVS+R   +Q+D           G FD+++SNPPYI       L  EV+ ++P
Sbjct: 164 RRNAEEHGVSDRIRFVQADALDLAFAQKAGGPFDLVISNPPYIPESEWATLQKEVKGYEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           R++L     G   YR+I       L K G+   E+  +    V ++    +   V   +D
Sbjct: 224 RLALVS-PTGFEFYRSIVATAPALLRKGGVLCFELHADGAEGVKKLL-GHEFRDVQVMQD 281

Query: 253 YGGNDRVL 260
           Y   DR L
Sbjct: 282 YSRLDRAL 289


>gi|329956197|ref|ZP_08296877.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT
           12056]
 gi|328524671|gb|EGF51732.1| protein-(glutamine-N5) methyltransferase [Bacteroides clarus YIT
           12056]
          Length = 282

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 114/267 (42%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R    E I  I G   F 
Sbjct: 24  EAANLSRIVCCEILGQTAVDYYLGKDIILSPKEMQDLDGILARLHNFEPIQYIQGTARFL 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV++ L             R+LD+GTG+G + ++L K  P 
Sbjct: 84  ERSYHVAPGVLIPRPETEELVETMLKEIASD------ARVLDIGTGSGCIAVSLSKAFPD 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178
            K    DIS +AL IA+ N    G + RF  L+ +  +   G    +DVIVSNPPY+   
Sbjct: 138 AKVTAWDISDEALNIARRNNDMLGGNVRF--LRQNVLTYTPGDSECYDVIVSNPPYVTES 195

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR IA+     L   G    EI          
Sbjct: 196 EKQTMERNVLDWEPFSALFVPDNDPLLFYRRIAELGKTMLAPGGRLYFEINRAYGEATAT 255

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +    +   KD  GNDR+++  R
Sbjct: 256 MLCEQGYTNLQVLKDISGNDRIVIAER 282


>gi|171057270|ref|YP_001789619.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leptothrix cholodnii SP-6]
 gi|170774715|gb|ACB32854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leptothrix cholodnii SP-6]
          Length = 280

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 9/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V GLS   ++ + D VL   Q       + R L  E +  + G  +F+ 
Sbjct: 21  ARLDAQLLLGHVCGLSRTGLLTNDDQVLPAAQLARWQQLLARRLAGEPVAYLTGRHEFHG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++SD  +PRP+TE LVD  L             R+LDLGTG+GA+ LA+    P  
Sbjct: 81  LTLHITSDVLDPRPDTETLVDWGLELL---ARLGRPARVLDLGTGSGAIALAIKHRCPSA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD S  AL +A++N     +    D    +WF ++ G  FD+I+SNPPYI      
Sbjct: 138 QVSAVDFSAAALAVARANGARLNLD--VDWQPGNWFENLAGQRFDLILSNPPYIAEDDPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +PR +L  G DGL   R++     +HL   G   +E G++Q V V  +  S
Sbjct: 196 MP---ALRHEPRQALVSGADGLDDIRSLVRQAPQHLVAGGWLLLEHGHDQGVAVQDLLRS 252

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V+   D   + R 
Sbjct: 253 TGYREVDRRLDLADHVRC 270


>gi|77163924|ref|YP_342449.1| modification methylase HemK [Nitrosococcus oceani ATCC 19707]
 gi|254436166|ref|ZP_05049673.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
 gi|76882238|gb|ABA56919.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|207089277|gb|EDZ66549.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
          Length = 283

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 7/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             ++   L  +  +    +    D  L   Q       + R  K E +  I GW++F+++
Sbjct: 25  RLEAERLLAYLLKVERSYLYAWSDRRLTPTQWVSFQRLLQRRAKGEPLAYIRGWQEFWSL 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++  T  PRPETE +V+ AL     R++    + + DLGTG+GA+ LA+  E P  +
Sbjct: 85  NLQVTEATLIPRPETEQVVELAL----QRLDLERALNVADLGTGSGAIALAMGSERPRAR 140

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            +  D+S + LE+A+ N    G+         DWF  + G  F +I SNPPYI       
Sbjct: 141 VIATDVSAETLEVARENGRRLGLC-NVTFRLGDWFVPLVGERFHLIASNPPYIAEGDPH- 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L      F+P I+L     GL   R IA     HL   G   +E GY Q   ++ +F   
Sbjct: 199 LTQNGLAFEPDIALIAKDKGLGAARHIAMTAREHLLDGGWLLLEHGYEQGPSLLALFTQL 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  F D  G  RV+
Sbjct: 259 GYQQVADFCDLAGLPRVV 276


>gi|85059853|ref|YP_455555.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Sodalis glossinidius str. 'morsitans']
 gi|84780373|dbj|BAE75150.1| putative protoporphyrinogen oxidase [Sodalis glossinidius str.
           'morsitans']
          Length = 282

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L + TG++  +++   ++ L D Q   L   + R  + E +  + G R+F++
Sbjct: 22  ARSDAEILLAQQTGVARTRLLAFGETPLTDAQHATLEALLARRERGEPVAYLTGEREFWS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S+DT  PRP+TE LV  AL    P         +LDLGTG+GA+ LAL  E P +
Sbjct: 82  LPLRVSADTLIPRPDTECLVQRALDLLSP-----GRAEVLDLGTGSGAIALALASERPEW 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +  G+D    A+ +A++NA   G+       + DWF  ++   + +IVSNPPYI++    
Sbjct: 137 RITGIDRLPGAVALARANAARLGLR-NVQFHEGDWFKPLQAQRYRLIVSNPPYIKADDPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  +VR F+PR +L  G DGL     I  G   HL   G   +E G+ Q   V  +   
Sbjct: 196 LMQGDVR-FEPRSALVAGEDGLQDLAAICRGAGAHLEPGGWLVLEHGWCQGAAVRGLLAD 254

Query: 242 RKLFLVNAFKDYGGNDRV 259
                +   +DYG N+RV
Sbjct: 255 TGFGQIATLRDYGDNERV 272


>gi|222153024|ref|YP_002562201.1| methyltransferase [Streptococcus uberis 0140J]
 gi|222113837|emb|CAR41935.1| putative methyltransferase [Streptococcus uberis 0140J]
          Length = 274

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 12/265 (4%)

Query: 1   MQALRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           ++A+ +    L  V       S+   I   +  +    +  L + +    +H S   I+G
Sbjct: 14  LEAIGEDRENLVYVLRELKKWSTLDFIQYQNREVTPEDQELLKDIMAELSQHRSPQYIVG 73

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              F ++ L++      PRPETE LVD  LA +         +R+LD+GTG+GA+ ++L 
Sbjct: 74  QAYFRDLVLSVDERVLIPRPETEELVDLILAEN-----STQSLRLLDIGTGSGAIAISLK 128

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           KE P +     DIS +AL +A  NA   G   +   ++SD F S+ G FD+IVSNPPYI 
Sbjct: 129 KERPDWDVFASDISPEALALANYNAEQLGC--QITFVESDIFRSITGSFDIIVSNPPYIA 186

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + +G+ V   +P ++L    +G + YR I +    +L ++G    EIGY Q   + 
Sbjct: 187 FEDKEEVGINVLKSEPHLALFAEENGYAIYRKIIEEAGFYLKENGKLYFEIGYKQGKVIR 246

Query: 237 RIFESR-KLFLVNAFKDYGGNDRVL 260
            + ES      V   +DY G DR++
Sbjct: 247 EMLESSFPHKRVRLLQDYFGKDRMI 271


>gi|329766952|ref|ZP_08258480.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341]
 gi|328837677|gb|EGF87302.1| protein-(glutamine-N5) methyltransferase [Gemella haemolysans M341]
          Length = 280

 Score =  254 bits (650), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
           +   L  +   +S Q   +    +   +     + I + ++ +  +  + G+  FY+ + 
Sbjct: 24  ARFLLMYMLDENSQQFTNNISEQISKEKEELYFSLIDKHIEENMPLSHLAGFEYFYDRKF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFK 123
            ++ D   PR ETE L+   + +       ++ ++ILDL TG+G + + L KE  S   K
Sbjct: 84  KVTKDVLSPRMETEELIYKVIEYIKSI--NKNNIKILDLCTGSGIIGITLRKELESKSLK 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  DIS +AL++AK NA+ N        +QSD F ++   FD+IVSNPPYI       +
Sbjct: 142 VVASDISEEALKVAKENAIMNEAE--VKFIQSDIFENINEKFDIIVSNPPYIAYSDKITM 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V ++DP ++L    DG+  YR I +    +LNKDG+   EIGY+Q+  ++++    +
Sbjct: 200 EDNVLNYDPHLALFAEEDGMYFYREIVENSKEYLNKDGMIFFEIGYDQREKILKLANENE 259

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                 +KD  G DR+ +  R
Sbjct: 260 FK-AEVYKDINGRDRMAILER 279


>gi|149372324|ref|ZP_01891512.1| putative protoporphyrinogen oxidase [unidentified eubacterium
           SCB49]
 gi|149354714|gb|EDM43277.1| putative protoporphyrinogen oxidase [unidentified eubacterium
           SCB49]
          Length = 282

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 79/257 (30%), Positives = 114/257 (44%), Gaps = 4/257 (1%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                  G +  +       V        ++ AI R L HE I  I+G   FY +   + 
Sbjct: 29  LLTEHYFGFNKFETHQKGADVFPVEHEQHISEAIQRLLLHEPIQYIIGETAFYGLPFKVD 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             T  PRPETE LV+  L  +       D   ILD+GTG+G + ++L KE    +    D
Sbjct: 89  RHTLIPRPETEELVEWILVEA---ANNEDDKEILDIGTGSGCIAVSLAKEFDKAQVSAYD 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           IS  AL++A+ NA+TN V  RF  +       +E  FDVIVSNPPY+  +    +   V 
Sbjct: 146 ISEGALKVAQENALTNKVEVRFKNVDILALDELEQSFDVIVSNPPYVRDLEKKMMQANVL 205

Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + +P  +L     D L  YR IA    + L K+GL   EI      ++  + +       
Sbjct: 206 EHEPATALFVSDTDPLIFYRKIAALAFKSLKKNGLLYFEINEYLGEEMKVLMKEMGFNNC 265

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  G DR++   R
Sbjct: 266 IIKKDIYGKDRMMRAER 282


>gi|119505821|ref|ZP_01627887.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080]
 gi|119458319|gb|EAW39428.1| protoporphyrinogen oxidase [marine gamma proteobacterium HTCC2080]
          Length = 271

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             ++S   L +        +    D  + + +       + R    E +  ILG  +F++
Sbjct: 14  PQKESELLLFQTFECDRSWLYAHGDEPVTESRVAHFLGLVERRQAGEPLAYILGQWEFWS 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ D   PR +TELLV  A+A     + ++   R LDLGTG+GAV LA+  E P  
Sbjct: 74  LPLKVTPDVLIPRMDTELLVQWAVAL----LPEQSKQRCLDLGTGSGAVALAVKHEFPTS 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VD+S  AL +A++N     +    + L+  WF  V    FD++V+NPPYI      
Sbjct: 130 EVTAVDLSQPALNVARTNGQQLQLE--VEWLEGSWFEPVAAREFDLVVANPPYIREDDDH 187

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++   +P+++L  GIDGL   R +       L   G   +E G++Q  DV  +  +
Sbjct: 188 LHQGDLPA-EPKMALTSGIDGLHALRQLVADGQSALGPGGWMLLEHGWDQGPDVRDLLVT 246

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V   +D  G +RV 
Sbjct: 247 HGWQAVETRRDLAGRERVT 265


>gi|254485503|ref|ZP_05098708.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseobacter sp. GAI101]
 gi|214042372|gb|EEB83010.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseobacter sp. GAI101]
          Length = 271

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 130/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     +           I        +  ++G R FY
Sbjct: 15  DPARDARILLAHAASVDASRVTLIAPEEIAPEIAERFETLIALRAVRVPVSHLVGQRAFY 74

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S D  +PRPETE L++ AL+ +           ++DLGTG+G + + LL E P 
Sbjct: 75  GRDFKISRDVLDPRPETETLIELALSEAFDT--------VMDLGTGSGCILVTLLAERPE 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +G+G+D+S  A   A +NAV +GV+ R D  QSDWF++ EG FD+IV+NPPY+    + 
Sbjct: 127 ARGLGLDLSEAACLQASANAVLHGVAARADIRQSDWFAAAEGRFDLIVANPPYLAKSEMA 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  E+R  +P ++L  G+DGLS YR IA     +L   G    EIG+ Q  DV +IF  
Sbjct: 187 GVAPELRLHEPEMALTDGLDGLSAYRVIASQAQGYLTATGRVLAEIGWQQGPDVAQIFRD 246

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    D  G DRVL
Sbjct: 247 AGWGRVRILPDLDGRDRVL 265


>gi|285017272|ref|YP_003374983.1| methyltransferase hemk protein [Xanthomonas albilineans GPE PC73]
 gi|283472490|emb|CBA14995.1| probable methyltransferase hemk protein [Xanthomonas albilineans]
          Length = 277

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L          +       L           + R  + E +  + G R F+ 
Sbjct: 18  ARGDAEVLLIHALQRDRAWLFAHAREPLSAETVAVFRGLVARRAQGEPVAYLTGRRGFWT 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +   T  PR +TE LV+ AL     R++ +   R+ DLGTG+GA+ LAL  E P  
Sbjct: 78  LDLAVGPATLIPRADTERLVELALE----RLDMQPGRRVADLGTGSGAIALALASERPRA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + +  D+S  AL +A++N + +G+          W   + G  FD+I SNPPYI +    
Sbjct: 134 QVLATDLSAAALAVAEANMLAHGL-HNVAFAHGAWLVPLAGQRFDLIASNPPYIAAGDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R ++P  +L  G+DGL   R I  G   HL   G   +E G++Q   V  +  +
Sbjct: 193 LTQGDLR-YEPLSALTSGVDGLDDIRQIVAGAPAHLRAGGWLLLEHGWDQGNAVRALLTA 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
            +   V  ++D    DRV L C
Sbjct: 252 ARFIAVETYQDLELRDRVTLGC 273


>gi|329904247|ref|ZP_08273722.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548071|gb|EGF32800.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 278

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 10/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    GL+  ++I   + +L   Q   ++    R +  E I  ++G R+FY +R  +
Sbjct: 25  RILLGHALGLTRIELITGNEQMLTPAQAQRVSALFERRIAGEPIAYLVGTREFYGLRFEV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETELLV+ A+             R+LD+GTG+GA+ +AL           +
Sbjct: 85  TPAVLIPRPETELLVELAIDRL------PRQGRVLDMGTGSGAIAVALANSRRDAAVSAI 138

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D S  AL +A+ NA  +  + +    +SDW++++EG  FD+IV+NPPYI          +
Sbjct: 139 DFSDAALAVARRNAAHH--AVQVHLQRSDWYAALEGQCFDMIVANPPYIVEGDHHLSEGD 196

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +R F+P  +L    DGLS  R I  G +  L   G   +E GY+Q   V  + ++ +   
Sbjct: 197 LR-FEPVDALTDHADGLSALRQIVSGATAALAPAGWLLMEHGYDQAAAVCALLDAAQFTD 255

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V ++ D  G  RV    R
Sbjct: 256 VQSWPDLAGIARVSGGRR 273


>gi|29349137|ref|NP_812640.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253571300|ref|ZP_04848707.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29341045|gb|AAO78834.1| putative protoporphyrinogen oxidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251839253|gb|EES67337.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 278

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 122/260 (46%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + G+ +  + +  D +L   ++  L N I R  K+E I  I G+ +F      ++
Sbjct: 27  LICCDMLGVDALDIYMGKDIILSACKQRELENIIFRLQKNEPIQYIRGYAEFCGRNFRVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPET  LVD  +       E  D  R+LD+GTG+G + ++L K  P  K    D
Sbjct: 87  PGVLIPRPETAELVDLIVK------ENPDARRLLDIGTGSGCIAISLDKNLPDAKVDAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGL-FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N     +  +    + D FS+  ++G  +D+IVSNPPY+       +  
Sbjct: 141 ISEEALAIARKNNEE--LDAQVTFRRQDVFSADGIQGTSYDIIVSNPPYVTETEKTEMEA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  YR IA+     L   G    EI      D++R+ E  + 
Sbjct: 199 NVLDWEPELALFVPDEDPLRFYRRIAELGRELLRPGGKLYFEINQAYGQDMIRMIEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR+L   R
Sbjct: 259 RDVRVIKDIFGKDRILTANR 278


>gi|118498112|ref|YP_899162.1| HemK family modification methylase [Francisella tularensis subsp.
           novicida U112]
 gi|194323338|ref|ZP_03057122.1| methyltransferase, HemK family [Francisella tularensis subsp.
           novicida FTE]
 gi|118424018|gb|ABK90408.1| modification methylase, HemK family [Francisella novicida U112]
 gi|194322702|gb|EDX20182.1| methyltransferase, HemK family [Francisella tularensis subsp.
           novicida FTE]
          Length = 284

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKTVKDLNNNDRCT 277


>gi|265753007|ref|ZP_06088576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_33FAA]
 gi|263236193|gb|EEZ21688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_33FAA]
          Length = 278

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   
Sbjct: 25  AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V 
Sbjct: 85  VNKHVLIPRPETGELVDWII-----REHKYGWVKILDIGTGSGCIAVSLTKNLEEAEVVS 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   
Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +       
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   +
Sbjct: 260 NIELRKDLFQNDRMIKAEK 278


>gi|237711579|ref|ZP_04542060.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725968|ref|ZP_04556449.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229435776|gb|EEO45853.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454274|gb|EEO59995.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 278

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V G+S  ++    D+     ++  L + +VR  K E I  I+G  +FY +   
Sbjct: 25  AKLLLTQVFGMSVVELYAGKDTTFSVNEQKRLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +     R  K   V+ILD+GTG+G + ++L K     + V 
Sbjct: 85  VNKHVLIPRPETGELVDWII-----REHKYGRVKILDIGTGSGCIAVSLTKNLEEAEVVS 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   
Sbjct: 140 WDVSEKALQVAERNCRRNGVRVTLEQRDVLLASPAGEQFDVIVSNPPYITEKEKANMSAN 199

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +       
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLGYK 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   +
Sbjct: 260 NIELRKDLFQNDRMIKAEK 278


>gi|218961885|ref|YP_001741660.1| modification methylase, HemK family [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730542|emb|CAO81454.1| modification methylase, HemK family [Candidatus Cloacamonas
           acidaminovorans]
          Length = 273

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 119/259 (45%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    +     LS  ++I+    +L D +   + NA  R  K E    I G   FY + L
Sbjct: 23  DFWFLISYYLHLSRSEIILSRQRILTDWEGEIIGNAFSRLEKGEPPQYITGTAYFYGLDL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE LV+  +         +   RILD+GTG+GA+ +AL    P     
Sbjct: 83  KVNPAVLIPRPETERLVELTMERL------KGTERILDIGTGSGAIAIALKHNLPSLNVS 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             +IS  ALE AK NA             SD F  V+  ++V++SNPPYI    +  L  
Sbjct: 137 ATEISFSALETAKKNAEIYRAD--IHFYLSDCFPPVKQSYEVLISNPPYISKAEIATLNS 194

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            ++D +P I+L GG DGL  YR +    S +L+++G  ++E    QK  ++ I       
Sbjct: 195 RIKDKEPVIALQGGEDGLDFYRKLLSESSEYLSENGFLALEHSDTQKEAIMNIARKEGWT 254

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD    DR L   R
Sbjct: 255 KIEPLKDLTDKDRYLFIYR 273


>gi|309792621|ref|ZP_07687082.1| modification methylase, HemK family [Oscillochloris trichoides DG6]
 gi|308225343|gb|EFO79110.1| modification methylase, HemK family [Oscillochloris trichoides DG6]
          Length = 274

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  +      +++ +  + +         N + R    E +  ++G ++FY 
Sbjct: 15  PRLDAELLLSHLLAWPRARLLAERAAPIAPPVAEAFMNLVERRATGEPVAYLVGHKEFYG 74

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +      PRPETELLV+ ALA    R   +   RI DLGTG+GA+ +AL  + P  
Sbjct: 75  YELLVDRRVLVPRPETELLVEVALAGLGDR---QAAWRIADLGTGSGAIAVALGLQLPHA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD+S  ALE+A +N   + +SER   +Q D  + + G +D+IVSNPPY    I+  
Sbjct: 132 QIEAVDLSADALEVAAANVQRHALSERVRLMQGDLCAPLAGHYDLIVSNPPY---TILAE 188

Query: 183 LGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           +   V   +P ++L+ GG DG   YR I     +HL   G    EIG  Q   V  + ++
Sbjct: 189 VEPNVLAHEPHLALEGGGADGADFYRRIFATAPQHLRAGGAIVCEIGAWQGEIVSALAQA 248

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
                 V  + D  G+ RV+
Sbjct: 249 AFPTDEVRLYHDLAGHARVV 268


>gi|50914206|ref|YP_060178.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|306827354|ref|ZP_07460641.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes
           ATCC 10782]
 gi|50903280|gb|AAT86995.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10394]
 gi|304430501|gb|EFM33523.1| protein-(glutamine-N5) methyltransferase [Streptococcus pyogenes
           ATCC 10782]
          Length = 279

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 8/251 (3%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
             +   SS  +++  +  +       L +      +H S   I G   F +++L +    
Sbjct: 29  SEIKEWSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRV 88

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PRPETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS 
Sbjct: 89  LIPRPETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISR 143

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            AL++AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +
Sbjct: 144 AALDLAKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSE 201

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAF 250
           P ++L    +G + YR I +    +L K+G    EIGY Q   +  + ++      +   
Sbjct: 202 PHLALFAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVV 261

Query: 251 KDYGGNDRVLL 261
            D  G +R+++
Sbjct: 262 TDIFGKERMVV 272


>gi|227871846|ref|ZP_03990246.1| polypeptide chain release factor methyltransferase [Oribacterium
           sinus F0268]
 gi|227842304|gb|EEJ52534.1| polypeptide chain release factor methyltransferase [Oribacterium
           sinus F0268]
          Length = 346

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 43/295 (14%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDD---RQRFFLTNA------IVRSLKHESIHRILGWR 58
              L     L++   ++     L      Q   L           +  +   + +ILG +
Sbjct: 47  RLLLQESFSLNTAGYLLRKQEPLCKAGIEQTEILQKLHSFYENFEKRRRRIPLAQILGRQ 106

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAF-------------SLPRIEKRDVVR----- 100
            FY +   ++ D   PR +TE LVD  L                   +EK++        
Sbjct: 107 SFYGLDFFVNEDVLIPRADTECLVDLVLEDYADLAKQAGKTYAEKQNLEKQNSEHVSNKH 166

Query: 101 --------------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                         ILDL TG+G + +++ K  P+ + + VD+S KAL +AK NA  + +
Sbjct: 167 EDNVENGAISSSLNILDLCTGSGCIGISVAKHLPYQELLLVDLSEKALAVAKKNAEKH-L 225

Query: 147 SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            E    LQSD  ++V+G  F +++SNPPYI S ++  L  EV +++P+++LDGG DGL  
Sbjct: 226 GENVRLLQSDLLTAVQGKKFSLLLSNPPYIVSRVIPGLEREVSEYEPKMALDGGEDGLLF 285

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           YR IA    + L       +EIGY+Q   V  IF+      V  F D  GN RV+
Sbjct: 286 YRRIAKEAKKVLLPGARLYLEIGYDQGESVKDIFQKEGYEAVEVFPDLSGNPRVV 340


>gi|56707339|ref|YP_169235.1| hemK protein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110669809|ref|YP_666366.1| hemK protein [Francisella tularensis subsp. tularensis FSC198]
 gi|134301376|ref|YP_001121344.1| HemK family methyltransferase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224456402|ref|ZP_03664875.1| HemK family methyltransferase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370016|ref|ZP_04986023.1| modification methylase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874174|ref|ZP_05246884.1| methyltransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603831|emb|CAG44802.1| hemK protein homolog [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320142|emb|CAL08185.1| hemK protein homolog [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049153|gb|ABO46224.1| methyltransferase, hemK family [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|151568261|gb|EDN33915.1| modification methylase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840173|gb|EET18609.1| methyltransferase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158464|gb|ADA77855.1| methyltransferase, hemK family protein [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 284

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINLDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKIVKDLNNNDRCT 277


>gi|115315349|ref|YP_764072.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18]
 gi|254369839|ref|ZP_04985849.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|115130248|gb|ABI83435.1| hemK methylase [Francisella tularensis subsp. holarctica OSU18]
 gi|157122798|gb|EDO66927.1| hypothetical protein FTAG_01187 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 284

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKIVKDLNNNDRCT 277


>gi|225386764|ref|ZP_03756528.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme
           DSM 15981]
 gi|225047126|gb|EEG57372.1| hypothetical protein CLOSTASPAR_00512 [Clostridium asparagiforme
           DSM 15981]
          Length = 342

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 80/315 (25%), Positives = 129/315 (40%), Gaps = 61/315 (19%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD-----DRQRFFLTNAIVRSLKHESIHRILG 56
            A  D+   L    GL     + +    +D       +       I R  +   + ++LG
Sbjct: 21  DAGLDARYLLLDAFGLGLASFLANRGRNVDGMPGGAEKAQVYEALITRRAERIPLQQLLG 80

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            ++F  +   ++     PR +TE LV+  L       +KR  + +LD+ TG+G + ++L 
Sbjct: 81  VQEFMGLEFFVNEHVLIPRQDTETLVELVLEE-----QKRRDLDVLDVCTGSGCIAVSLA 135

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEG----------- 163
           +   +     +D+S +AL++A+ NA          F  +QSD F+ +E            
Sbjct: 136 RLGRYASVTALDVSAEALKVAEKNAAALLGEYDGDFRLVQSDMFAGLETKGLQEQKPVEP 195

Query: 164 --------------------------------------LFDVIVSNPPYIESVIVDCLGL 185
                                                  FD++VSNPPYI S +++ L  
Sbjct: 196 DTSREQTSGEPDAWQGRTAVKPAVAGELPCRLCVPCTLRFDILVSNPPYIPSQVIEGLEP 255

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD +PR++LDG  DGL  YR +A    R L   G    EIG++Q   V  + E     
Sbjct: 256 EVRDHEPRLALDGSPDGLKFYRILASEGKRFLRPGGAVYFEIGWDQAQAVSALLEQEGFA 315

Query: 246 LVNAFKDYGGNDRVL 260
            +   KD  G DRV+
Sbjct: 316 RIRTVKDMAGMDRVV 330


>gi|149918412|ref|ZP_01906902.1| Modification methylase HemK [Plesiocystis pacifica SIR-1]
 gi|149820712|gb|EDM80122.1| Modification methylase HemK [Plesiocystis pacifica SIR-1]
          Length = 304

 Score =  253 bits (648), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 85/270 (31%), Positives = 126/270 (46%), Gaps = 9/270 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L +    S   + +    +LD+ QR      + R L  E +  I G R F+
Sbjct: 31  DARVDAEHLLAQALDCSRMDLYLRHAELLDEAQRAPFRELVRRRLSREPVAYIEGARGFH 90

Query: 62  --NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             ++ L +      PRPETE LVD  L     R     ++ +LD+GTG+GA+ LA+ K  
Sbjct: 91  ALDLELAVDRRVLIPRPETEHLVDWLLEDL--REPPAPLMDVLDVGTGSGAIALAVAKAR 148

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176
                  VD S  AL++A+ NA  +G+ ER    +++    VE   G +  I +N PYI 
Sbjct: 149 YEVTVTAVDASTDALDVARQNAERHGLGERVRLRRANLLDGVEDPPGGWTAIAANLPYIP 208

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS--RHLNKDGLCSVEIGYNQKVD 234
           +     L  EVRDF+PR +L GG DGL   R +   V+  R L   G   +EIG  Q  +
Sbjct: 209 AADWAQLAPEVRDFEPRGALVGGDDGLDLVRRLITQVAERRALAPGGGLYLEIGVGQAAE 268

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V  +  +     V +  DY    R++   R
Sbjct: 269 VEALLRAAGFVGVASRDDYAKIPRIVAGYR 298


>gi|308175428|ref|YP_003922133.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           DSM 7]
 gi|307608292|emb|CBI44663.1| glutamine methylase of release factor 1 [Bacillus amyloliquefaciens
           DSM 7]
          Length = 286

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 119/266 (44%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A R+   +   L   TG+   +++ +    + + + +     +    +   I  I+G  
Sbjct: 17  EAGREKNAAELLLLNDTGMDRSKLLANLQEPVGEDELYRFRRHVEMHKEGVPIQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        + + + ++D+GTG+GA+ + L  E
Sbjct: 77  QFYGREFFVNFDVLIPRPETEEVVFHLLDKQKRVFSEGERLNVIDIGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
              F     DIS +AL++A+ NA   G   RF  LQ D  +         D+IVSNPPYI
Sbjct: 137 CGHFSVAASDISKEALQVAERNAQNLGADVRF--LQGDLLTPFISSGKKADIIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + +   +    L   EIGYNQ   V
Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEDLPLVMKDKALVVFEIGYNQGKAV 254

Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260
             +F  S     V   KD  G DR +
Sbjct: 255 EDLFRHSFPNAEVEVVKDINGKDRTV 280


>gi|320546677|ref|ZP_08040989.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus
           ATCC 9812]
 gi|320448732|gb|EFW89463.1| protein-(glutamine-N5) methyltransferase [Streptococcus equinus
           ATCC 9812]
          Length = 276

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G S    I+  +  +  + +  + + + +  +H S   I G   F ++ L +      PR
Sbjct: 33  GWSLLDFILHQNKDVSTQDQALIEDIMSQLKEHRSPQYITGKAYFRDLELDVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +      +  ++ILD+GTG+GA+ ++L    P +     DIS +AL+
Sbjct: 93  PETEELVDLVLKEN-----SKADLQILDIGTGSGAIAISLKSARPDWHVTASDISSEALQ 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +AK N+         D ++SD F+ + G FDVI+SNPPYI       +G+ V   +P ++
Sbjct: 148 LAKENSER--KQVSLDFIESDVFNQISGKFDVIISNPPYIAYDDEGEVGVNVLASEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DG + YR I +G + HL ++G    EIGY Q   + R+         V   +D  
Sbjct: 206 LFADEDGFAIYRRIIEGANSHLTENGKLYFEIGYKQGDGMRRLLAQHFPEKRVRVLQDVF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVM 273


>gi|15605689|ref|NP_213065.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5]
 gi|6225500|sp|O66506|HEMK_AQUAE RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.AaoHemKP
 gi|2982836|gb|AAC06458.1| protoporphyrinogen oxidase [Aquifex aeolicus VF5]
          Length = 281

 Score =  253 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  RD+   L  +  +S  Q+ +     + +         +    K      ++G  +  
Sbjct: 22  EYRRDAEIILSYLLKVSPSQIPLMYAREIPEEIVKRFFKQMKERKKGIPTAYVIGEWECM 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE+L++     +L  I +   +   +LG+GTG + + LL E P 
Sbjct: 82  GRVFKVKKGVLVPRPETEILIE----RTLELIPQDREMVGFELGSGTGCISINLLIERPK 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
                 D++  A+E+ K NA  + V +R      + F  V+G  FD IVSNPPYI     
Sbjct: 138 LVMYATDVNPDAVELTKENAKLHKVDDRLFVFLGNAFEPVKGMKFDFIVSNPPYIPENFW 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV+  +   SL GG  G   Y  IA+  ++HL ++G  ++EIG++Q   V  + E
Sbjct: 198 EILPEEVKK-EGYTSLIGGKKGWEFYELIAEEGTKHLKENGFIALEIGHDQGKVVKELLE 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
            +K F VN FKDY G DRV++  R
Sbjct: 257 -KKCFKVNIFKDYAGFDRVVIAQR 279


>gi|313636274|gb|EFS02085.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria seeligeri FSL S4-171]
          Length = 283

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 113/258 (43%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  +  +LD+ TG+G + + L K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK NA+      RF  +++D   S +     FD++++NPPYI       +
Sbjct: 141 SDISGPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAEM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S 
Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHSTVVIHKDINSKDRYV 276


>gi|116873907|ref|YP_850688.1| HemK family modification methylase [Listeria welshimeri serovar 6b
           str. SLCC5334]
 gi|116742785|emb|CAK21909.1| modification methylase, HemK family [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 283

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEMSRELEPNHEEQFQADFDRYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V+ +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAETFLKKHPVMNVLDVCTGSGIIAIALKKAFPNITFTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL +AK NA+      RF  +++D   + +     FD+I++NPPYI       +
Sbjct: 141 SDISGPALAVAKKNALLLNADIRF--VETDLLETFKHNGERFDMIIANPPYISEAEKAAM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P ++L    DG++ Y    D +   LN      VEIGY Q   V ++FE S 
Sbjct: 199 SDYVLKNEPSLALFAENDGMAIYERFVDNLKYVLNTSFWVGVEIGYTQGERVKQLFEKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 259 PHSTVLIHKDINSKDRYV 276


>gi|332529975|ref|ZP_08405925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
 gi|332040448|gb|EGI76824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
          Length = 283

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   LRDSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
            R++   L        +    +I      L             R      +  + G  +F
Sbjct: 18  RREAQLLLLHALDKPLIDRAWLIAHDTDSLAGTAELRYIELARRRASGTPLPYLTGKIEF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKES 119
           + + L +      PRP+TE LVD AL       + +    +I+DLGTG+GAV LA+ +  
Sbjct: 78  HGMPLQVDGRVLIPRPDTETLVDWALECLTDIGQAEDPPPQIIDLGTGSGAVALAMARFL 137

Query: 120 PFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
                  +   +D+S  AL +A++NA    +  R   +   W + +   +D+IVSNPPYI
Sbjct: 138 AQTGRTGEVHALDVSPDALALAQANAERLDL--RVQFMLGAWLTGISARYDLIVSNPPYI 195

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                          +PR++L  G DGL   R I      +L   G   +E G++Q + V
Sbjct: 196 AEGDPHL---AALGHEPRLALISGPDGLDAIRIIVRQAPDNLRPGGWLLLEHGWDQALAV 252

Query: 236 VRIFESRKLFLVNAFKDYGGNDRV 259
             +        V + +D  G +R 
Sbjct: 253 RELLTRAGFADVQSRRDLAGIERC 276


>gi|311070219|ref|YP_003975142.1| glutamine methylase [Bacillus atrophaeus 1942]
 gi|310870736|gb|ADP34211.1| glutamine methylase [Bacillus atrophaeus 1942]
          Length = 288

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +   L    G+   ++       + + + +     +    +   +  I+G  
Sbjct: 17  EAGRDRNAAELLLMNDIGMDRSKLFASLQDPISEDELYRFKRHVEMHKEGVPVQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        + + +R++D+GTG+GA+ + L  E
Sbjct: 77  AFYGRVFIVNDDVLIPRPETEEVVLHLLEKQKRVFPEGEPLRVIDVGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
           +  F    +DIS +AL+IA  NA   G   + D  + D            D+IVSNPPYI
Sbjct: 137 NKHFSVSAIDISKEALQIAAENAERLGA--KVDFFEGDLLEPFIKEGKKADIIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + + R +N   L   EIG+ Q   V
Sbjct: 195 SEEEMADLSNVVRFHEPLHALTDGGDGLRFYKRFMEDIPRVMNDKALVVFEIGWKQGDAV 254

Query: 236 VRIF-ESRKLFLVNAFKDYGGNDRVL 260
             +F  +     V   KD  G DR +
Sbjct: 255 KEMFLRTFPNAEVEVLKDINGKDRTV 280


>gi|71903503|ref|YP_280306.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS6180]
 gi|71802598|gb|AAX71951.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS6180]
          Length = 279

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|208779476|ref|ZP_03246821.1| methyltransferase, HemK family [Francisella novicida FTG]
 gi|208744437|gb|EDZ90736.1| methyltransferase, HemK family [Francisella novicida FTG]
          Length = 284

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKAYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LA+  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALAIAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFVYIEHGFTQADAIKALFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTHIKTVKDLNNNDRCT 277


>gi|52425246|ref|YP_088383.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307298|gb|AAU37798.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
          Length = 340

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 94/278 (33%), Positives = 140/278 (50%), Gaps = 19/278 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D++  L  VT  S   +I   D++L + +   L+  +VR  + E I  ILG +DF+
Sbjct: 62  NPKVDANRLLQFVTQKSKGTIIAFSDTLLTENESALLSQYLVRRCEGEPIAYILGEQDFW 121

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTG--------- 109
           ++ L +S DT  PRP+TE+LV+ AL F+  R+        + ILDLGTGTG         
Sbjct: 122 SLNLEVSPDTLIPRPDTEILVEKALEFAKFRLNSPHFSGELAILDLGTGTGAIALALAAE 181

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVI 168
              ++  K     + +GVD++  A+E+AK NA+ N +  + + LQS+WF  +E   FD+I
Sbjct: 182 LAPIS-QKCGAKLRILGVDLTNGAVELAKRNALRNQLP-QVEFLQSNWFEQLENRQFDII 239

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V NPPYI+         +VR F+P  +L     G +  R I +    HL   G   +E G
Sbjct: 240 VGNPPYIDRQDEHLALGDVR-FEPLTALVAEDSGYADLRHIIERAPFHLKHQGWLILEHG 298

Query: 229 YNQKVDVVRI---FESRKLFLVNAFKDYGGNDRVLLFC 263
           + Q   V  I   F       V   KDYG N+R+ L C
Sbjct: 299 WQQGQKVRSIFNEFSQNYWQQVATMKDYGDNERITLGC 336


>gi|254504444|ref|ZP_05116595.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11]
 gi|222440515|gb|EEE47194.1| methyltransferase, HemK family [Labrenzia alexandrii DFL-11]
          Length = 280

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +     +S  ++++     + D           + L  + + RILG R+FY 
Sbjct: 22  PELDAKLLVSAALRISVSELLLRESGEVPDAAAGIALEYAAQRLNGKPVGRILGEREFYG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               L+  T EPRP+TE L+++ L    P       + + D+GTGTGA+ + LL E    
Sbjct: 82  RTFRLNHATLEPRPDTETLIETVLKDCDPT----RPLTMCDIGTGTGAIAVTLLAELQKA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V VDIS  AL  A SNA  +GV  RF  ++SD+ ++++  FD ++SNPPYI + ++  
Sbjct: 138 VMVAVDISEDALGCAVSNAENHGVGARFLPVRSDYAAALQHGFDWVISNPPYIRTPVLRE 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   DP ++LDGG DGL  YR I    +  L   G  ++EIG +Q  ++       
Sbjct: 198 LSKEVLQHDPILALDGGADGLEGYRQIVSQAASVLVPGGRIALEIGRDQGEELKNQLRHH 257

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               ++  +D G  DRV    R
Sbjct: 258 GFEAIDIIQDLGRRDRVATARR 279


>gi|15672580|ref|NP_266754.1| protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281491064|ref|YP_003353044.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactococcus lactis subsp. lactis KF147]
 gi|12723493|gb|AAK04696.1|AE006293_2 protoporphyrinogen oxidase [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281374822|gb|ADA64342.1| Protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactococcus lactis subsp. lactis KF147]
 gi|326406099|gb|ADZ63170.1| methylase of polypeptide chain release factor [Lactococcus lactis
           subsp. lactis CV56]
          Length = 270

 Score =  253 bits (647), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/234 (33%), Positives = 123/234 (52%), Gaps = 8/234 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             + D++   LT    R  ++E    I+GW +F +++L +      PRPETE LV+  LA
Sbjct: 41  EKITDQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILA 100

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +     ++D ++ILD+GTG+GA+ ++L +    +     DIS +AL +A  NA  N   
Sbjct: 101 EN-----EKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEIN--Q 153

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + +QSD    +   FD+IVSNPPYI       +   V  ++P ++L     GL+ Y+
Sbjct: 154 ANLEFIQSDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQ 213

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVL 260
            IAD    HL  +G   +EIGY Q   V  IF+ +    LV+  +D  G DR++
Sbjct: 214 KIADQAVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMI 267


>gi|217969846|ref|YP_002355080.1| modification methylase, HemK family [Thauera sp. MZ1T]
 gi|217507173|gb|ACK54184.1| modification methylase, HemK family [Thauera sp. MZ1T]
          Length = 289

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 78/255 (30%), Positives = 119/255 (46%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V    + +++  P+  L           + R      +  + G R+FY    
Sbjct: 28  DARVLLRHVLQCPAARLVAWPEQKLAAEDWAEYRALVERRAAGVPVAYLTGTREFYGREF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETELLV+ ALA        R  +R+LDLGTG+GA+ + L  E    + V
Sbjct: 88  LVTPAVLIPRPETELLVELALA----HFPGRRGLRVLDLGTGSGALAVTLALELEAAEVV 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            +D S +AL +A +NA   G S     +QSDWF ++ +  F++IVSNPPY+ +       
Sbjct: 144 ALDRSREALWVAMANAARLGAS--VSFVQSDWFGALGDEHFELIVSNPPYVAAGDPHLEQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +VR F+PR +L  G  GL     I  G    L   G   +E GY+Q      +      
Sbjct: 202 GDVR-FEPRGALAAGPQGLDDLAEIVAGAPARLVDGGWLFLEHGYDQAASARGLLADAGF 260

Query: 245 FLVNAFKDYGGNDRV 259
             + ++ D  G +RV
Sbjct: 261 AAIASWADLAGIERV 275


>gi|138896953|ref|YP_001127406.1| HemK family modification methylase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249771|ref|ZP_03148467.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. G11MC16]
 gi|134268466|gb|ABO68661.1| Modification methylase, HemK family [Geobacillus
           thermodenitrificans NG80-2]
 gi|196210647|gb|EDY05410.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. G11MC16]
          Length = 288

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 7/265 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC   G     +       +++         + R    H  I  ++G   FY  
Sbjct: 24  RAAEWLLCHHLGTDRAGLFARWREPVEETVYERFAADVRRHAVDHVPIQYLIGHEWFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  ++     PRPETE LV   L       E R+ + ++D+GTG+GA+ + L  E+    
Sbjct: 84  RFLVNRHVLIPRPETEELVLGVLERLPRLFEGRERIDVVDVGTGSGAIAVTLALENRTLS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIV 180
               DIS +AL +A+ NA   G   R   L+ D    +       DV+VSNPPYI     
Sbjct: 144 VTATDISEEALTVARENAERLGA--RISFLRGDLLQPLIEQGQTVDVVVSNPPYIPETDA 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V+D++P  +L GG DGL  YR  A  +   L    L + E+G  Q   V  +  
Sbjct: 202 ATLSPVVKDYEPHTALFGGRDGLDFYRRFARDLPLVLGTPALAAFEVGAGQGEAVASLLA 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G DR++   R
Sbjct: 262 AAFPEAEIEVAFDLNGKDRMVYMTR 286


>gi|312877229|ref|ZP_07737198.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796038|gb|EFR12398.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 288

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   + ++ G+   +VI++    +   +   + NAI R L+   +        F      
Sbjct: 34  ALMMVSQILGIDKAEVILNKGLPVRQDKYEKIVNAISRYLQGYPLQYCTNKAFFMGFEFY 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PR +TE+LV+ A+       + R  +  LD+GTG+G + +AL K       + 
Sbjct: 94  VDENVLIPRFDTEVLVEVAIEI----FKGRKNLYFLDIGTGSGCIAVALCKFL-DCNVLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
           VDIS +ALE+A+ NA  NGV  +   ++S+ F ++     FD I+SNPPYI    +  L 
Sbjct: 149 VDISERALEVARKNAKLNGVENKILFIRSNLFENIPQNLKFDAILSNPPYISKDEIFELD 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P I+L    DG   ++ IA+    +L   G    E+G++Q  +V RI E    
Sbjct: 209 PRVLK-EPHIALFSEEDGFWFFKEIANKAKLYLKDSGYIIFEVGFSQAKEVKRILEQNGY 267

Query: 245 FLVNAFKDYGGNDRVLLF 262
             + +  D    +R +  
Sbjct: 268 KNIKSRNDLNNIERCIFA 285


>gi|139473767|ref|YP_001128483.1| methyltransferase [Streptococcus pyogenes str. Manfredo]
 gi|134272014|emb|CAM30253.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo]
          Length = 279

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRTALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|121997790|ref|YP_001002577.1| HemK family modification methylase [Halorhodospira halophila SL1]
 gi|121589195|gb|ABM61775.1| [protein release factor]-glutamine N5-methyltransferase
           [Halorhodospira halophila SL1]
          Length = 281

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G+    +   P+  +           I R    E +  ++   +F +
Sbjct: 26  ARLDAELLLAEVLGVGRSHLFAFPERPIPAATIEAYRALIARRRTGEPVAYLMRRCEFRD 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L+++     PRPETE LV+ A+A            ++L+LGTG+GA+ LA+  E P  
Sbjct: 86  LTLSVTPAVLVPRPETEHLVEQAVACL------PAGGQVLELGTGSGAIALAVAHERPDA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
           +    + S  AL +A+ N    G+SE       DW   +  G FDVIVSNPPY+++   +
Sbjct: 140 RITATERSTAALAVAQENRHRLGLSE-VHLTPGDWNEGIPPGPFDVIVSNPPYVQTTAAE 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             G    + +PR +L  G DGL+  R++    +  L + G   +E G  Q   V  + ++
Sbjct: 199 -WGNGALEHEPREALAAGHDGLADIRSLVPPATAELARGGWLILEHGARQGGAVRELLQA 257

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V    D  G +R+ L  R
Sbjct: 258 AGLEAVRTECDLAGLERLTLGRR 280


>gi|171462957|ref|YP_001797070.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Polynucleobacter necessarius subsp. necessarius STIR1]
 gi|171192495|gb|ACB43456.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Polynucleobacter necessarius subsp. necessarius STIR1]
          Length = 280

 Score =  253 bits (646), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 10/268 (3%)

Query: 3   ALRDSHSFLCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  ++   +  +      L    ++   +  L+D       +     LK E I  ++G R
Sbjct: 17  APAEAKILMAYILEKYYELPRSALLSRDELELNDTAFEEWKSLESNRLKGEPIAYLIGKR 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F+N+ L ++     PRPETELLV+  L             RILDLGTG+GA+ LA+  E
Sbjct: 77  GFHNIDLFVAPGVLIPRPETELLVEIGLQEIR---RLNAPTRILDLGTGSGAIALAIAHE 133

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
           +P       D S +AL+IAK+NA    ++ + + LQ  W+ ++EG   FD+I+SNPPYI 
Sbjct: 134 APQAMVTATDQSNQALDIAKTNAKQLMLTNQVEFLQGSWYEAIEGNAPFDIILSNPPYIA 193

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +     ++R F+P  +L    D LS   TI  G  +HL  +GL +VE  ++Q   VV
Sbjct: 194 SQDLHLKQGDLR-FEPLSALTDHKDSLSCLETIISGARQHLQLNGLIAVEHSFDQSDAVV 252

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +      + A  D GG+ RV+   +
Sbjct: 253 ALMKQAGFHNIQAHFDLGGHYRVVSGRK 280


>gi|119897273|ref|YP_932486.1| HemK protein [Azoarcus sp. BH72]
 gi|119669686|emb|CAL93599.1| HemK protein [Azoarcus sp. BH72]
          Length = 278

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 8/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L       + +++  P+  L   +    +  + R ++ E +  ++G R+FY    
Sbjct: 22  DARVLLRYALACPASRLVAWPEQRLSAEEWENFSRLVERRVEGEPVAYLIGEREFYGRSF 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRP+TELLV+ A+A        +  VR+LDLGTG+GA+ + L  E       
Sbjct: 82  AVTPAVLIPRPDTELLVELAVA----HFSAQQRVRVLDLGTGSGALAITLALELDAADVT 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG 184
            +D S +AL +A +NA   G S     +QSDWF ++ E  F +IV+NPPYI +       
Sbjct: 138 ALDRSREALWVAMANAARLGAS--VSFVQSDWFDALGEERFQLIVANPPYIAADDAHLEE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R F+PR +L  G  GL     IA     HL   G   +E GY+Q + V  +      
Sbjct: 196 GDLR-FEPRSALAAGTAGLDDLSEIAAAAPAHLEAGGWLFLEHGYDQAMSVRGLLADAGF 254

Query: 245 FLVNAFKDYGGNDRVL 260
             ++++KD  G +RV 
Sbjct: 255 AAISSWKDLAGIERVT 270


>gi|307544473|ref|YP_003896952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
 gi|307216497|emb|CBV41767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
          Length = 282

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC V G+    +    D       +      I      + +  + G R+F+ 
Sbjct: 22  ARLDAEVLLCHVLGVDRAWLYTWGDREAGGSDQARFEALIAARAAGQPVAYLTGEREFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L     T  PRP+TE LV +AL+    R       R+LDLGTG+GAV LAL  E P +
Sbjct: 82  LSLLTGPSTLIPRPDTETLVAAALSRMPAR-----AGRLLDLGTGSGAVALALASERPDW 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             +G+D++  A+ +A+ NA   G++        DWF++++   FDVIV+NPPY+      
Sbjct: 137 YALGIDLNPGAVALARRNAERLGIA-NVGFRVGDWFAALDESDFDVIVANPPYLADDDPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L  G  GL+    + D     L  DG   +E G  Q   V     +
Sbjct: 196 LELGDVR-FEPRGALVAGDQGLADLHHLVDASRHRLVADGWLLLEHGAEQGAAVREALCA 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V + +D  G++RV L  
Sbjct: 255 KGYQDVASEQDLAGHERVSLGR 276


>gi|89256989|ref|YP_514351.1| modification methylase [Francisella tularensis subsp. holarctica
           LVS]
 gi|156503188|ref|YP_001429254.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|167009370|ref|ZP_02274301.1| modification methylase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368244|ref|ZP_04984264.1| modification methylase hemK [Francisella tularensis subsp.
           holarctica 257]
 gi|290954491|ref|ZP_06559112.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312096|ref|ZP_06802909.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89144820|emb|CAJ80159.1| modification methylase [Francisella tularensis subsp. holarctica
           LVS]
 gi|134254054|gb|EBA53148.1| modification methylase hemK [Francisella tularensis subsp.
           holarctica 257]
 gi|156253791|gb|ABU62297.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 284

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFNDIKIVKDLNNNDRCT 277


>gi|310816144|ref|YP_003964108.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ketogulonicigenium vulgare Y25]
 gi|308754879|gb|ADO42808.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ketogulonicigenium vulgare Y25]
          Length = 276

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 92/260 (35%), Positives = 135/260 (51%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A RD+   L    G++  ++ +    V++  Q      AI +  K + + +I+G R FY 
Sbjct: 23  AARDARLLLAHALGVAPDRLTLVLPDVVNAAQADAFHAAIAQRAKRQPVAQIIGQRMFYG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ DT +PRPETE+L+ +ALA        +   R+LD+GTGTG + L LL E+   
Sbjct: 83  RNFLVTPDTLDPRPETEVLIAAALA--------QPFTRVLDIGTGTGCILLTLLAENQQA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G GVD+S  AL++A+ NAV  G+  R +   SDW  +  G FD+IVSNPPYI    +  
Sbjct: 135 VGQGVDLSPAALDVAQRNAVALGLDTRAEFSLSDWGMAATGRFDLIVSNPPYIALDEMAG 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  ++P ++L  G DGL+ YR I     R L+  G   VE G  Q   +  I ++ 
Sbjct: 195 LSPEVTGWEPAMALTDGGDGLAAYRAILADAPRLLSDAGRVIVEFGPTQADAIRAIGDAA 254

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
                    D  G DR L+F
Sbjct: 255 GFTSAQLHHDLDGRDRCLVF 274


>gi|304321560|ref|YP_003855203.1| modification methylase, HemK family protein [Parvularcula
           bermudensis HTCC2503]
 gi|303300462|gb|ADM10061.1| modification methylase, HemK family protein [Parvularcula
           bermudensis HTCC2503]
          Length = 318

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G     +I      +           + R  + E +  + G ++F+ 
Sbjct: 63  AALDARVLLGHVLGCGPAALIAADQEEVGLEPLTAFAALLDRRRRGEPVAYLTGEQEFFG 122

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRPETELLV++AL             R+LDLGTG+G + + +L E P  
Sbjct: 123 RDFHVTPAVLIPRPETELLVEAALRPL------PHGGRLLDLGTGSGCIAVTILAERPDS 176

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G  +D+S +AL +A+ NA  +GV  R       + ++  G FD+I+SNPPYI       
Sbjct: 177 RGEAIDLSAEALAVARINARRHGVEGRLGLAPVPFEAAPSGPFDLILSNPPYIP--DDQS 234

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           L   V  ++PR +L  G DGL  YR +   +++ L   G   +EIG +Q   V  +   S
Sbjct: 235 LPTSVESYEPRQALRAGADGLDAYRVLGPVIAQRLAPQGTALLEIGADQAAAVTALLRRS 294

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             +  V+  +D  G DR++   
Sbjct: 295 FPVHQVSVKRDLAGLDRMVTIT 316


>gi|257885489|ref|ZP_05665142.1| modification methylase HemK [Enterococcus faecium 1,231,501]
 gi|257821345|gb|EEV48475.1| modification methylase HemK [Enterococcus faecium 1,231,501]
          Length = 290

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 39  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 99  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 153

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 271

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 272 KVKIKKDLFGNERMI 286


>gi|304385308|ref|ZP_07367653.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
           DSM 20284]
 gi|304328515|gb|EFL95736.1| protein-(glutamine-N5) methyltransferase [Pediococcus acidilactici
           DSM 20284]
          Length = 285

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 7/255 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +      +  +++V     L   Q       + R++  E +  I    +FY     +
Sbjct: 28  ELIMMDRMEWNRTELLVHYRQQLRLDQWQQFQKDVQRAVNGEPVQYITNKANFYGREFYV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            S    PR ETE LV+  L       +    +R+LD+GTG+G + + L  E P ++   V
Sbjct: 88  DSRVLIPRVETEELVEHILN---AHPQLNQPLRVLDIGTGSGNIAITLKLERPDWQVTAV 144

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DI+ +AL +A+ NA  +      D  Q   F +V+G  FD+IVSNPPYI     D +   
Sbjct: 145 DIASEALAVAQQNA--HQQEAVVDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQS 202

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V +++P  +L    DGL  Y+ I   ++ HL   G    E GY+Q   + + F     + 
Sbjct: 203 VIEYEPDKALFAPDDGLFWYKQIGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVK 262

Query: 246 LVNAFKDYGGNDRVL 260
            V+  +D  G+DR+L
Sbjct: 263 DVDVLQDLSGHDRIL 277


>gi|94988611|ref|YP_596712.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94990487|ref|YP_598587.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94992435|ref|YP_600534.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|94994409|ref|YP_602507.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|209559424|ref|YP_002285896.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131]
 gi|94542119|gb|ABF32168.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS9429]
 gi|94543995|gb|ABF34043.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10270]
 gi|94545943|gb|ABF35990.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS2096]
 gi|94547917|gb|ABF37963.1| Peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS10750]
 gi|209540625|gb|ACI61201.1| Putative protoporphyrinogen oxidase [Streptococcus pyogenes NZ131]
          Length = 279

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|304311493|ref|YP_003811091.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
 gi|301797226|emb|CBL45446.1| Protein-glutamine N-methyltransferase [gamma proteobacterium HdN1]
          Length = 289

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 9/261 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   LC V       + +     L+  Q     + + R L+ E +  +LG ++F
Sbjct: 24  LSPQLDAELLLCAVLERGRTWLRIHDGECLNAAQARAFDDWLERRLRGEPVAYLLGCQEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L ++  T  PRP+TE LV+ ALA +       +   +LDLGTGTGA+ LAL  E  
Sbjct: 84  WSLPLKVAPCTLIPRPDTERLVEVALARA-----PENCTTVLDLGTGTGAIALALKHERR 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +     D    A  +A  NA   G+S   + L+SDW +++ G  FD+IVSNPPYI+   
Sbjct: 139 HWHVTATDRVEMAAALASENAQQLGLS--LEVLESDWLAALTGRRFDLIVSNPPYIDPHD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
               G  V  ++P  +L     GL   +TI +   +HL  +G+ ++E GY+Q   V R+ 
Sbjct: 197 PHLRGDGV-SYEPLSALVAEHGGLGDLKTIVEHAPQHLCAEGVLALEHGYDQAQAVGRLL 255

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  +    DYGG  RV 
Sbjct: 256 LGAGFDDIQTHHDYGGQVRVT 276


>gi|330837037|ref|YP_004411678.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta coccoides DSM 17374]
 gi|329748940|gb|AEC02296.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta coccoides DSM 17374]
          Length = 287

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 5/257 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC V  +S  Q++    + + +         +   L    +  ILGWR+FY  R
Sbjct: 26  LDARLLLCAVMDVSQEQLLARWHTEVPEEASQRFAAMLSARLAATPMAYILGWREFYGRR 85

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PRP+TE L+++ALA+        +   I D+ TG+GAV + L  E P  + 
Sbjct: 86  FHVDERVLIPRPDTETLIEAALAWIQEH--SLEAPDIADICTGSGAVGITLALELPSSRV 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
              DIS  ALE+A  NA+  G +      Q D    V    FD++VSNPPY+       +
Sbjct: 144 ALTDISASALEVATENAMRLG-AGNIRLYQGDVTEPVASESFDIVVSNPPYLTPHWYSHV 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +V   +PR++L GG DGL+  R +  G    L  +G   +E  + Q  +V RI E   
Sbjct: 203 EAQVLK-EPRLALVGGDDGLTIIRRLVVGARSVLAPEGALFLECDWRQCDEVARIMERCG 261

Query: 244 LFLVNAFKDYGGNDRVL 260
                 + D  G  RV+
Sbjct: 262 FAQTWIYNDLAGRPRVV 278


>gi|227552472|ref|ZP_03982521.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecium TX1330]
 gi|257888290|ref|ZP_05667943.1| modification methylase HemK [Enterococcus faecium 1,141,733]
 gi|257896820|ref|ZP_05676473.1| modification methylase HemK [Enterococcus faecium Com12]
 gi|293378551|ref|ZP_06624714.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium PC4.1]
 gi|227178384|gb|EEI59356.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecium TX1330]
 gi|257824344|gb|EEV51276.1| modification methylase HemK [Enterococcus faecium 1,141,733]
 gi|257833385|gb|EEV59806.1| modification methylase HemK [Enterococcus faecium Com12]
 gi|292642880|gb|EFF61027.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium PC4.1]
          Length = 279

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQQLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      +    V+   FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQHEGT--KISFYHGNTLEPVQDRRFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGKIFLEIGFRQGEAVKKIFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|53711799|ref|YP_097791.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46]
 gi|52214664|dbj|BAD47257.1| putative protoporphyrinogen oxidase [Bacteroides fragilis YCH46]
          Length = 278

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
               C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     +
Sbjct: 26  KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       
Sbjct: 86  APGVLIPRPETEELVDLVVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL IA  N         F+ +       V +  +D+IVSNPPY+     + +   
Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVDDDQYDMIVSNPPYVTESEKNEMEPN 199

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++PR++L     D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|313631913|gb|EFR99058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria seeligeri FSL N1-067]
          Length = 283

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 10/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++ +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEINRELEPNHEKQFQADFERYLSGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  +  +LD+ TG+G + + L K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKNPLPTVLDVCTGSGIIAITLKKAFPEVLVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL IAK NA+      RF  +++D   S +     FD++++NPPYI       +
Sbjct: 141 SDISGPALAIAKKNALLLNADVRF--VETDLLESFKQNGERFDMVLANPPYISEAEKAEM 198

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P ++L    DGL+ Y    + +   LN      VEIGY Q   V  +F+ S 
Sbjct: 199 SDYVLKNEPALALFAENDGLAIYERFVEDLQYVLNPSFWVGVEIGYTQGEKVKDLFQKSY 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
              +V   KD    DR +
Sbjct: 259 PHSMVVIHKDINSKDRYV 276


>gi|254557154|ref|YP_003063571.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           JDM1]
 gi|254046081|gb|ACT62874.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           JDM1]
          Length = 288

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  ++ L   Q+++     L           I R +  E +  +LG   FY + L 
Sbjct: 30  ARFLLLGLSRLDQTQLLIRYREPLPSAVWHAYQQGIDRVVAGEPVQYVLGDAPFYGLTLQ 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PR ETE LVD  L      +     VR+LD+GTG+GA+ LA+  E P ++   
Sbjct: 90  VDPAVLIPRVETEELVDWILTD----VPATAPVRLLDVGTGSGAIALAIKHERPAWEITA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            DIS  AL++AK+NA    +      + SD  +SV    FD+IVSNPPYI +   D +  
Sbjct: 146 SDISTAALQVAKANADRLHLD--VKLVHSDLLTSVSAQPFDIIVSNPPYIAASEKDVMDA 203

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P+ +L    DGL+ Y  +A  V+ HL   G   +E GY+Q   +  +F      
Sbjct: 204 SVLAHEPQTALFADHDGLALYEQLATTVADHLTSTGRLYLEFGYHQGPALQTLFAQSMPD 263

Query: 245 FLVNAFKDYGGNDRVL 260
             V   +D  G+DR+L
Sbjct: 264 ATVTLRQDMAGHDRML 279


>gi|261208267|ref|ZP_05922940.1| modification methylase HemK [Enterococcus faecium TC 6]
 gi|289565644|ref|ZP_06446090.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium D344SRF]
 gi|260077524|gb|EEW65242.1| modification methylase HemK [Enterococcus faecium TC 6]
 gi|289162612|gb|EFD10466.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium D344SRF]
          Length = 290

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 39  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 99  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 153

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHK 271

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 272 KVKIKKDLFGNERMI 286


>gi|313888255|ref|ZP_07821926.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845658|gb|EFR33048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 276

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 9/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  +       ++   + +LD +        + +  K   +  ILG  DFY    
Sbjct: 25  ETRRILSDLLNKDLSYLVSHDEDLLDSKIENKYFEILEKRQKGIPLQYILGEEDFYGRTF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE+ V       L  IE   +  +L++G GTG V +++  ES      
Sbjct: 85  KVIEGVLIPRQDTEISV----KKILNIIENNQINNMLEIGCGTGIVSISVDLES-SVDVT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDIS KA+E  K N     ++ +   ++SD FS++   FD+I SNPPYI+S  ++ L +
Sbjct: 140 AVDISEKAIENTKINKEK--LNSKIKIIKSDLFSNINEKFDLIYSNPPYIKSKEIENLQV 197

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD++PR++LDGG DGL  YR+I       LN  G    EIGY++  D+  + + +  F
Sbjct: 198 EVRDYEPRLALDGGEDGLFFYRSIIKSSPEFLNHKGFLVFEIGYDEAEDICNLMKDK--F 255

Query: 246 LVNAFKDYGGNDRVLLFC 263
            V  +KD    DRV++  
Sbjct: 256 EVEVYKDLNNLDRVVVGQ 273


>gi|153007051|ref|YP_001381376.1| HemK family modification methylase [Anaeromyxobacter sp. Fw109-5]
 gi|152030624|gb|ABS28392.1| modification methylase, HemK family [Anaeromyxobacter sp. Fw109-5]
          Length = 285

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 121/258 (46%), Gaps = 11/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L R       ++ +D D  L D +       + R  + E    ++G R+FY     
Sbjct: 28  AEVLLARALSCDRVRLYLDFDKPLGDPELAVYRELVRRRAEGEPTAYLVGKREFYGRDFA 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETELLV++ALA      E     R+LDL TG+GA+ + +  E P  + + 
Sbjct: 88  VDARVLVPRPETELLVEAALA------ELPRGGRLLDLCTGSGAIGVTVALERPDARVLA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
            D S  AL +A+ NA   G     +    D +++V G   F+VI SNPPY+ +  +  L 
Sbjct: 142 TDASEDALAVARENASRLGAV--VELAHGDLWAAVHGDARFEVIASNPPYVPAGELAGLA 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +P I+LDGG DGL+  R I  G    L   G   +E+      ++ R+      
Sbjct: 200 PEVRR-EPCIALDGGFDGLAVLRRIVSGAPGRLVPGGALLLEMHERHLDELPRLCLQAGF 258

Query: 245 FLVNAFKDYGGNDRVLLF 262
               A +D  G  R+++ 
Sbjct: 259 ERAEARRDLAGLPRLVVA 276


>gi|257899726|ref|ZP_05679379.1| modification methylase HemK [Enterococcus faecium Com15]
 gi|293571481|ref|ZP_06682508.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E980]
 gi|257837638|gb|EEV62712.1| modification methylase HemK [Enterococcus faecium Com15]
 gi|291608486|gb|EFF37781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E980]
          Length = 279

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQQLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      +    V+   FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQHEGT--KISFYHGNTLEPVQDRRFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKMALFAENDGLAVYEKIAVEAPSVLKPNGTIFLEIGFRQGEAVKKIFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|290969300|ref|ZP_06560825.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Megasphaera genomosp. type_1 str. 28L]
 gi|290780806|gb|EFD93409.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Megasphaera genomosp. type_1 str. 28L]
          Length = 290

 Score =  252 bits (645), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 134/264 (50%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G     +    +  L+  +       I +     ++  I G + F+ 
Sbjct: 26  PRLDAEILLAHVLGKERIYLYAHYEEPLNGEELAQYRAFIQKRADAYAVAHITGVKAFFG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S +   PRPETELLV+  +       ++R+ +RILD+GTG+GA+ L+LL   P  
Sbjct: 86  SDFLVSPEVLIPRPETELLVEYVIH----ACKQRESLRILDIGTGSGAILLSLLAHLPQA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
            G GVDIS  AL+IA+ N++  G+  R    +SD    V+G  F VIVSNPPY+ +  + 
Sbjct: 142 VGWGVDISRAALQIAEKNSIVQGLETRAVWRESDLCQQVQGERFSVIVSNPPYLTAADMA 201

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E+R  +P  +L GG DGL  YR +A      L   GLC+VEIG  Q+  V R+F +
Sbjct: 202 QLQPEIRR-EPETALFGGQDGLDIYRRLAVETVPLLEPGGLCAVEIGRGQEEAVQRLFTA 260

Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264
                L +   DYG   R L+F +
Sbjct: 261 DGDYTLQDCVWDYGRILRHLVFKK 284


>gi|187931104|ref|YP_001891088.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712013|gb|ACD30310.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 284

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETIVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  R I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIRIIISQAKDFLNLGGFIYIEHGFTQADAITALFSQC 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKIVKDLNNNDRYT 277


>gi|288554406|ref|YP_003426341.1| modification methylase, HemK family protein [Bacillus pseudofirmus
           OF4]
 gi|288545566|gb|ADC49449.1| modification methylase, HemK family protein [Bacillus pseudofirmus
           OF4]
          Length = 293

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 7/260 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     ++  ++ +     +D          ++       +  ++G+++FY  R  
Sbjct: 32  AEWLLLHHLNINRTKMFMMFQDPIDSGVWEAFKKDVLTHSNGVPVQHLMGYQEFYGRRFQ 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE L++  L      +     V +LD+G G+GA+ + L  E    K   
Sbjct: 92  VNGDVLIPRPETEELIEHVL-HLKQSLWGDASVDVLDVGAGSGAIGVTLALECAEMKVEA 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCL 183
           VDIS +ALEIA+ NA T  +  +    +SD  S    +E  FD+IVSNPPYI     D L
Sbjct: 151 VDISKEALEIARLNAET--LDAKMSFFESDLLSTPIQMEKRFDIIVSNPPYIPLGEHDEL 208

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
            + VR+ +P ++L GG DG   YR +   + + + + GL + E+G  Q   V  + E+  
Sbjct: 209 AVHVREHEPHLALFGGEDGYELYRRLTTELPKVMKEKGLIAFEVGAGQGETVRLMLETAF 268

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
                    D  G DR++  
Sbjct: 269 PNAETEVKLDINGKDRMVFA 288


>gi|255319518|ref|ZP_05360732.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SK82]
 gi|262378459|ref|ZP_06071616.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SH164]
 gi|255303458|gb|EET82661.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SK82]
 gi|262299744|gb|EEY87656.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acinetobacter radioresistens SH164]
          Length = 274

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 82/259 (31%), Positives = 125/259 (48%), Gaps = 13/259 (5%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L  +  +   +     D  L   Q+     A+ R    E +  ILG + F+ + L ++
Sbjct: 23  WLLEHILNIKMFEFRFRQDKELTAEQQHAYLAALARLEAGEPLAYILGSQPFWTLDLKVT 82

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PRP+TE+LV++ L   LP     +  +++DLGTGTGA+ LAL  E P++  +  D
Sbjct: 83  RDTLVPRPDTEVLVETVLTLELP-----EETKMVDLGTGTGAIALALASEKPYWSVLATD 137

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184
           +    L +A+ NA  +G+  + +     WF+++    E +FD+IVSNPPYI++       
Sbjct: 138 VYMPTLTVARENADKHGLQ-QVEFACGAWFAALNQLPEPMFDLIVSNPPYIDAEDRHMKD 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L     +P  +L     GL+   TI +     L   G   +E GY Q   V   FE +  
Sbjct: 197 LAT---EPVRALVALKQGLADLETIIEQGKSWLRPKGWIVLEHGYEQAEAVRSFFEHKGF 253

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   KDY GNDRV L  
Sbjct: 254 QSVRTVKDYNGNDRVTLGQ 272


>gi|33599374|ref|NP_886934.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
 gi|33566970|emb|CAE30883.1| heme biosynthesis protein [Bordetella bronchiseptica RB50]
          Length = 251

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 75/253 (29%), Positives = 118/253 (46%), Gaps = 9/253 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                V G S   ++      ++            R L  E +  +LG R+F      L+
Sbjct: 1   MLAEHVLGRSRAWLLAHDTDPVEPAHEAAWRQLAARRLAGEPMAYLLGGREFMGHWFALT 60

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            D   PRP+TELLV++AL +    ++ R   R+LDLGTG+GA+ +++    P  +    D
Sbjct: 61  PDVLIPRPDTELLVETALHW----LQGRAAPRVLDLGTGSGAIAVSVALGCPQAEVTATD 116

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLE 186
           +S  AL +A+ NA   G   R   L  DW+ ++     +D+IVSNPPYI          +
Sbjct: 117 LSAAALAVAEGNAQRLGA--RVRCLAGDWYEALPAQDRYDLIVSNPPYIAREDAHLAQGD 174

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +R F+PR +L    DGL+    IA G    L   G   +E G++Q      +     L  
Sbjct: 175 LR-FEPRGALTDENDGLAALARIAGGAPGRLLPGGAIWMEHGWDQAEAARALLRQAGLRE 233

Query: 247 VNAFKDYGGNDRV 259
           V++ +D  G +R+
Sbjct: 234 VHSRRDLAGIERI 246


>gi|323693925|ref|ZP_08108112.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum
           WAL-14673]
 gi|323502022|gb|EGB17897.1| hypothetical protein HMPREF9475_02975 [Clostridium symbiosum
           WAL-14673]
          Length = 354

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 69/327 (21%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57
           ++  D+   L    G+     ++D    ++    ++      + + +      I  ILG 
Sbjct: 31  ESGLDAWYLLEASFGIDQVHFLMDRTRRVNRQRLEKSYPVYRDYLEKRASRIPIQHILGN 90

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++F  +  T+  +   PR +TE LV++ L     R  K   + +LD+ TG+G + ++L  
Sbjct: 91  QEFMGLEFTVDENVLIPRQDTEKLVETVL-----RDHKNQALSVLDMCTGSGCIAVSLAV 145

Query: 118 ESPFFKGVGVDISCKAL------------------------------------------- 134
              + K    DIS  AL                                           
Sbjct: 146 LGGYDKVTAADISKAALKVAKKNVRRHFLVQKGTARSESTLISDTPWKLKMCTYVYQGGD 205

Query: 135 ----EIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
               E A  +   NG S           + F  L+SD F ++E    FD+IVSNPPYI S
Sbjct: 206 AQEQETAGESVSDNGYSPGIARIPGVRKKEFVLLESDLFLNLEQDEKFDIIVSNPPYIPS 265

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++D L  EV+D +PR++LDG  DGL  YR +A    R+L + G    EIG +Q   V +
Sbjct: 266 AVIDGLEPEVKDHEPRMALDGAEDGLYFYRILAQQSGRYLKEGGFIYFEIGCDQAEAVGK 325

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +     +   KD  G DRV+  CR
Sbjct: 326 LLTAAGFGEIETIKDEPGLDRVVRACR 352


>gi|270291032|ref|ZP_06197255.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
 gi|270280428|gb|EFA26263.1| conserved hypothetical protein [Pediococcus acidilactici 7_4]
          Length = 285

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 7/255 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +      +  +++V     L   Q       + R++  E +  I    +FY     +
Sbjct: 28  ELIMMDRMEWNRTELLVHYRQQLRLDQWQQFQKDVQRAVNGEPVQYITNKANFYGREFYV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            S    PR ETE LV+  L       +    +R+LD+GTG+G + + L  E P ++   V
Sbjct: 88  DSRVLIPRVETEELVEHILN---AHPQLNQSLRVLDIGTGSGNIAITLKLERPDWQVTAV 144

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DI+ +AL +A+ NA  +      D  Q   F +V+G  FD+IVSNPPYI     D +   
Sbjct: 145 DIASEALAVAQQNA--HQQEAVVDFRQGSLFDAVKGERFDIIVSNPPYIAENERDVMDQS 202

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V +++P  +L    DGL  Y+ I   ++ HL   G    E GY+Q   + + F     + 
Sbjct: 203 VIEYEPDKALFAPDDGLFWYKQIGRQLANHLTNAGQLWCEFGYHQGAKLKQYFSELPGVK 262

Query: 246 LVNAFKDYGGNDRVL 260
            V+  +D  G+DR+L
Sbjct: 263 DVDVLQDLSGHDRIL 277


>gi|150003436|ref|YP_001298180.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
           8482]
 gi|254881265|ref|ZP_05253975.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|149931860|gb|ABR38558.1| putative protoporphyrinogen oxidase [Bacteroides vulgatus ATCC
           8482]
 gi|254834058|gb|EET14367.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 278

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 119/259 (45%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V G+S  ++    D+     +R  L + +VR  K E I  I+G  +FY +   
Sbjct: 25  AKLLLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +     R  K   VRILD+GTG+G + ++L K     + V 
Sbjct: 85  VNKHVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVS 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S KAL++A+ N   NGV    +       S     FDVIVSNPPYI       +   
Sbjct: 140 WDVSEKALQVAERNCRRNGVRVILEQRDVLLASPAGERFDVIVSNPPYITEKERADMSAN 199

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +    +  
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   +
Sbjct: 260 NIKLRKDLFQNDRMIKAEK 278


>gi|169826580|ref|YP_001696738.1| HemK-like protein [Lysinibacillus sphaericus C3-41]
 gi|168991068|gb|ACA38608.1| HemK-like protein [Lysinibacillus sphaericus C3-41]
          Length = 285

 Score =  252 bits (644), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  + G S  +V++     L + Q+      I   +    +   +G  +FY     
Sbjct: 27  ARIVMQHILGTSYSEVMLHLQDKLTEAQQVKFKALIEEHVNGRPVQYCVGSEEFYGRSFI 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE L+       + ++ +   +++ D+GTG+GA+ +++  E P    V 
Sbjct: 87  VDESVLIPRPETEELI-LGTINRMTKLFQHQALKVADIGTGSGAIAISMKLECPTLTVVA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            D+S  AL  A+ NA    +    D    D  + + G  FD+++SNPPYI       +  
Sbjct: 146 TDLSEAALATAQKNAQR--LEANIDFRLGDLTAPLAGEKFDIVLSNPPYIAFEEAQAMSD 203

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P  +L    DGL  YR +A+ +  ++N+  L  +EIGY Q   V + F+     
Sbjct: 204 VVLKHEPHSALFAEEDGLILYRQLAEQLPAYMNRPALIGLEIGYTQGEKVAKFFQDSFPQ 263

Query: 245 FLVNAFKDYGGNDRVLL 261
             ++  KD  G  R++ 
Sbjct: 264 ATISIEKDINGKPRMIF 280


>gi|60680030|ref|YP_210174.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC
           9343]
 gi|60491464|emb|CAH06214.1| putative protoporphyrinogen oxidase [Bacteroides fragilis NCTC
           9343]
          Length = 278

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
               C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     +
Sbjct: 26  KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       
Sbjct: 86  APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL IA  N         F+ +       V +  +D+IVSNPPY+     + +   
Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++PR++L     D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|69249627|ref|ZP_00605025.1| Modification methylase HemK [Enterococcus faecium DO]
 gi|257880057|ref|ZP_05659710.1| modification methylase HemK [Enterococcus faecium 1,230,933]
 gi|257882293|ref|ZP_05661946.1| modification methylase HemK [Enterococcus faecium 1,231,502]
 gi|257891148|ref|ZP_05670801.1| modification methylase HemK [Enterococcus faecium 1,231,410]
 gi|257893962|ref|ZP_05673615.1| modification methylase HemK [Enterococcus faecium 1,231,408]
 gi|68194106|gb|EAN08646.1| Modification methylase HemK [Enterococcus faecium DO]
 gi|257814285|gb|EEV43043.1| modification methylase HemK [Enterococcus faecium 1,230,933]
 gi|257817951|gb|EEV45279.1| modification methylase HemK [Enterococcus faecium 1,231,502]
 gi|257827508|gb|EEV54134.1| modification methylase HemK [Enterococcus faecium 1,231,410]
 gi|257830341|gb|EEV56948.1| modification methylase HemK [Enterococcus faecium 1,231,408]
          Length = 290

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 39  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 98

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 99  TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 153

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 154 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 211

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 212 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 271

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 272 KVAIKKDLFGNERMI 286


>gi|299537973|ref|ZP_07051259.1| HemK-like protein [Lysinibacillus fusiformis ZC1]
 gi|298726555|gb|EFI67144.1| HemK-like protein [Lysinibacillus fusiformis ZC1]
          Length = 285

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 5/257 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V G S  +V++     L   Q+      I        +   +G+ +FY     
Sbjct: 27  ARIVMQHVLGTSYGEVMLHLQDELTAAQQMKFIELIEEHANGRPVQYCVGYEEFYGRSFL 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE LV       LP++  +  +++ D+GTG+GA+ +++  E P    + 
Sbjct: 87  VDESVLIPRPETEELV-LGTINRLPKLFTKQTLKLADIGTGSGAIAISMKLECPALSVIA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            D+S  AL  A+ NA         D    D    + G  FD+++SNPPYI       +  
Sbjct: 146 TDLSEAALATAQKNAKRLEAD--IDFRLGDLADPLAGEKFDIVLSNPPYIAFNEAQAMSS 203

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V + +P  +L    DGL  YR +A+ +  ++N+  L  +EIGY Q   V + F+     
Sbjct: 204 VVLEHEPHSALFAEEDGLMLYRKLAEQLPAYMNRPALIGLEIGYTQGEKVAKFFQDSFPQ 263

Query: 245 FLVNAFKDYGGNDRVLL 261
             V+  KD  G  R++ 
Sbjct: 264 ATVSVEKDINGKPRMIF 280


>gi|91786751|ref|YP_547703.1| HemK family modification methylase [Polaromonas sp. JS666]
 gi|91695976|gb|ABE42805.1| [protein release factor]-glutamine N5-methyltransferase
           [Polaromonas sp. JS666]
          Length = 287

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 4   LRDSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             D+   L    G   +    ++      L D     +    +R  + E +  I+G ++F
Sbjct: 24  RLDAQLLLLHALGKPAIDRAWLLAHDTDQLTDEVAQRMRAFSLRRARGEPLAYIVGSKEF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L + +    PRP+TE LV  +L   L      +  +ILDLGTG+GA+ LA+     
Sbjct: 84  FGLELQVDARVLVPRPDTETLVHWSLE-VLQAPAMTERPQILDLGTGSGAIALAIAHSLQ 142

Query: 121 FF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + V VD S  AL +A+ NA    +    +  QS+W   V G F +I SNPPYI 
Sbjct: 143 AAGRPARVVAVDASAGALAVARENARRLQLE--LEFSQSNWLDEVGGHFHLIASNPPYIA 200

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S     +       +P  SL  G DGL   R I      HL   G   +E GY+Q   V 
Sbjct: 201 SADPHLV---ALAHEPLGSLAAGPDGLGDIRQIVAKAPEHLAPGGWLLLEHGYDQAAAVR 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRV 259
            +   R    V +  D  G  R 
Sbjct: 258 GLLRERGFAQVQSRLDLAGIARC 280


>gi|320354564|ref|YP_004195903.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobulbus propionicus DSM 2032]
 gi|320123066|gb|ADW18612.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfobulbus propionicus DSM 2032]
          Length = 286

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L  +T +S   V++     +D +        I +  +   +  + G ++F+
Sbjct: 21  EAALDARLLLQHLTAMSRSDVVLHGHESVDSQTVARYRQLIEQRCQRVPLQYLTGVQEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++  T+S     PRPETE +++  L           V R LD+ TG+GA+ + L +E   
Sbjct: 81  SLAFTVSPAVLIPRPETEFMLEQVLTTC----AGTTVERALDMCTGSGAIAVVLARELGR 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
              + VDIS  AL +A  N   +GV+     L  D F+++     FD+IVSNPPYI   +
Sbjct: 137 P-VIAVDISEAALAVAADNVRCHGVANLVTLLCGDLFAALNPARTFDLIVSNPPYIAEAV 195

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  EV   +PR++L GG  GL     IA+     L   G   +EIG +QK  V R+F
Sbjct: 196 IDQLEPEVAQAEPRLALSGGASGLESIARIAEAAQDFLCPGGWIFLEIGADQKHAVERLF 255

Query: 240 ESRK--LFLVNAFKDYGGNDRVLLFC 263
            +       V+   D+    RV+   
Sbjct: 256 HAPGLAYREVSVIHDWADRPRVVRAR 281


>gi|19746089|ref|NP_607225.1| protoporphyrinogen oxidase [Streptococcus pyogenes MGAS8232]
 gi|19748261|gb|AAL97724.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS8232]
          Length = 279

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKVNADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|323486284|ref|ZP_08091610.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum
           WAL-14163]
 gi|323400394|gb|EGA92766.1| hypothetical protein HMPREF9474_03361 [Clostridium symbiosum
           WAL-14163]
          Length = 354

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 84/327 (25%), Positives = 134/327 (40%), Gaps = 69/327 (21%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57
           ++  D+   L    G+     ++D    ++    ++      + + +      I  ILG 
Sbjct: 31  ESGLDAWYLLEASFGIDQVHFLMDRTRRVNRQRLEKSYPVYRDYLEKRASRIPIQHILGN 90

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++F  +  T+  +   PR +TE LV++ L     R  K   + +LD+ TG+G + ++L  
Sbjct: 91  QEFMGLEFTVDENVLIPRQDTEKLVETVL-----RDHKNQALSVLDMCTGSGCIAVSLAV 145

Query: 118 ESPFFKGVGVDISCKAL------------------------------------------- 134
              + K    DIS  AL                                           
Sbjct: 146 LGGYDKVTAADISKAALKVAKKNVRRHFLVQKGTARSESTLISDTPWKLKMCTYVYQGGD 205

Query: 135 ----EIAKSNAVTNGVS-----------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
               E A  +   NG S           + F  L+SD F ++E    FD+IVSNPPYI S
Sbjct: 206 AQEQETAGESVSDNGYSPGIARIPGVRKKEFVLLESDLFLNLEQDEKFDIIVSNPPYIPS 265

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++D L  EV+D +PR++LDG  DGL  YR +     R+L + G    EIG +Q   V +
Sbjct: 266 AVIDGLEPEVKDHEPRMALDGAEDGLYFYRILVQQSGRYLKEGGFIYFEIGCDQAEAVGK 325

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +     +   KD  G DRV+  CR
Sbjct: 326 LLTAAGFGEIETIKDEPGLDRVVRACR 352


>gi|56808655|ref|ZP_00366380.1| COG2890: Methylase of polypeptide chain release factors
           [Streptococcus pyogenes M49 591]
          Length = 279

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQPEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|241895237|ref|ZP_04782533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella paramesenteroides ATCC 33313]
 gi|241871543|gb|EER75294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella paramesenteroides ATCC 33313]
          Length = 286

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 124/256 (48%), Gaps = 6/256 (2%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L  +   +  Q+  + ++VL+D +R     A+      + +   LG   FY     + 
Sbjct: 35  YLLTGMMDWNYAQLANNLNTVLEDEKRLRFMVAVRAIKGGQPVQYALGHAAFYGREFQVD 94

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PR ETE LV+  LA      E+     +LD+GTG+GA+ ++L  E   +  VG D
Sbjct: 95  RRVLIPRQETEELVEWVLADHPTNTEQ----HVLDMGTGSGAIAVSLSAERTSWAVVGAD 150

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           IS +AL +AK NA     S     LQSD F+ V G FD+IV+NPPYI       +   V 
Sbjct: 151 ISEEALAVAKENAQLYAPS--VQLLQSDLFTGVTGSFDIIVANPPYISRNEQSLMDESVV 208

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P I+L    DGL+ Y+ +A  +   L   G    EIGY Q   +V +F +    +V 
Sbjct: 209 MFEPDIALYADDDGLALYKKMATDLLTFLKPGGAAYFEIGYQQGEKLVDLFSTLPHVIVT 268

Query: 249 AFKDYGGNDRVLLFCR 264
             +D  G+DR++   R
Sbjct: 269 LRQDLSGHDRMIKVLR 284


>gi|270295601|ref|ZP_06201802.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274848|gb|EFA20709.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 278

 Score =  251 bits (643), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 107/265 (40%), Gaps = 8/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S     +  D +L  +    L + + R    E I  + G   F 
Sbjct: 20  EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILSRLCNFEPIQYVQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + + L KE P 
Sbjct: 80  GRTFRVAPGVLIPRPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +    DIS +AL IA  N      S +F       +   E   FDVIVSNPPY+     
Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQFVQRDVLTYQPTEDEYFDVIVSNPPYVTETEK 193

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V +++P  +L     D L  YR I +     L   G    EI       V  + 
Sbjct: 194 KDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASML 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
             +    V   KD  GNDR ++  R
Sbjct: 254 RKQGYTNVRIRKDISGNDRYVIAER 278


>gi|332678839|gb|AEE87968.1| modification methylase, HemK family [Francisella cf. novicida Fx1]
          Length = 255

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 81/253 (32%), Positives = 129/253 (50%), Gaps = 6/253 (2%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N +L ++
Sbjct: 1   MIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQKLYVT 60

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    + V VD
Sbjct: 61  KDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQVVAVD 117

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           +  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      +   V
Sbjct: 118 LYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-NIDQSV 175

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +D++P  +L    +GL+  + I       LN  G   +E G+ Q   V  +F       +
Sbjct: 176 KDYEPARALFAADNGLADIKIIISQAKDFLNPRGFIYIEHGFTQADAVTALFSQYNFTHI 235

Query: 248 NAFKDYGGNDRVL 260
              KD   NDR  
Sbjct: 236 KTVKDLNNNDRCT 248


>gi|307708640|ref|ZP_07645103.1| HemK protein [Streptococcus mitis NCTC 12261]
 gi|307615214|gb|EFN94424.1| HemK protein [Streptococcus mitis NCTC 12261]
          Length = 278

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            LS    +      + + +  F+     +   H+    I+G  DFY ++L +      PR
Sbjct: 33  NLSFTDFVFALQQEVTEEEEVFVKEIFQQLATHKPAQYIIGQADFYGMQLKVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  LA +           +LD+GTG+GA+ LAL K    +     DIS +AL 
Sbjct: 93  PETEELVELILAEN-----PETNFSVLDIGTGSGAIALALAKNRSAWSVTAADISQEALN 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A  NA    +       +SD F+ +   +D+IVSNPPYI       +GL V   +P ++
Sbjct: 148 LASENAKNQKL--NIFFKKSDCFAEISEKYDIIVSNPPYISREDESEVGLNVLHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    DGL+ YR IA+  + +L   G   +EIGY Q   V  +F        +   KD  
Sbjct: 206 LFADEDGLAIYRRIAEDATDYLKDGGKIYLEIGYKQGQSVPELFRKHLPEKRLRTLKDQF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GQDRMVVI 273


>gi|293567648|ref|ZP_06678991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1071]
 gi|291589583|gb|EFF21388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1071]
          Length = 279

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|190572887|ref|YP_001970732.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas
           maltophilia K279a]
 gi|190010809|emb|CAQ44418.1| HemK protein, putative protoporphyrinogen oxidase [Stenotrophomonas
           maltophilia K279a]
          Length = 285

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++A  ++   L  V       +       L    +      + R +  E +  + G R F
Sbjct: 23  IEARHEAELLLLHVLDRPRSWLFAHATDPLAANDQAAFEALLARRVAGEPVAYLTGRRGF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L +   T  PRPETELLV+ AL     R+     +++ DLGTG+GA+ LAL  E P
Sbjct: 83  WTLDLEVDPATLIPRPETELLVELALE----RLPPDQSLQLADLGTGSGAIALALASERP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             + +  D S  AL +A  NA  + + + RF     DW++ ++G  FD+I SNPPYI S 
Sbjct: 139 QAQVLATDASPGALAVAARNAARHDLRNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L  G DGL   R I DG   HL   G   +E G++Q   +  +
Sbjct: 199 DPHLERGDLR-FEPATALASGPDGLDDIRRIVDGGQAHLLPGGWLLIEHGWDQGEAIRAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F++     V   +D    DR+ L  R
Sbjct: 258 FDAAGFAEVQTVQDLEQRDRITLGRR 283


>gi|163735802|ref|ZP_02143231.1| modification methylase, HemK family, putative [Roseobacter
           litoralis Och 149]
 gi|161390888|gb|EDQ15228.1| modification methylase, HemK family, putative [Roseobacter
           litoralis Och 149]
          Length = 277

 Score =  251 bits (643), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 86/263 (32%), Positives = 138/263 (52%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     +         + +        + +++G R+FY
Sbjct: 21  DPARDARVLLAHAAQVDAARVTLIAPEDMAADIIDRYDHLVSLRAVRVPVSQLIGSREFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ +  +PRPETE L+++AL+              LDLG G+G + + LL E P 
Sbjct: 81  GRRFNITREVLDPRPETESLIEAALS--------APFSDALDLGVGSGCLIVTLLAERPD 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            KGV +DIS  A   A +NAV + V++R   L+SDWF +VEG FD+IVSNPPY+ +  + 
Sbjct: 133 AKGVAIDISEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVSNPPYLAASEMS 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  E+RD +PR++L    DGL+ YR IA     +L+ +G   VE G+ Q   V  IFE+
Sbjct: 193 QVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSAEGRVLVETGWQQASSVRDIFEA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    ++   D GG DR++   +
Sbjct: 253 QGWGELSILPDLGGRDRIVSASK 275


>gi|288956983|ref|YP_003447324.1| HemK protein [Azospirillum sp. B510]
 gi|288909291|dbj|BAI70780.1| HemK protein [Azospirillum sp. B510]
          Length = 282

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L     L+    I   +  + D+    +   + R    E + RILG R+F+ + 
Sbjct: 24  LDARYLLEHALKLTRTDFITKSEQPVPDQDAAHVLTLVERRAAREPVGRILGHREFWTID 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L+ DT EPRP+TE +V++ALA    R   +  +R++D GTGTG + LALL E P   G
Sbjct: 84  LVLNPDTLEPRPDTETVVEAALAAIPDR---KAPLRLIDFGTGTGCILLALLSELPNATG 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VGVD+S  A++ A  NA  NG+++R      DW   +   FD++VSNPPYI S  +  L 
Sbjct: 141 VGVDLSPLAVQAAAGNAERNGLADRARFQIGDWAKDIRDRFDIVVSNPPYIPSADIAALE 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP  +LDGG DGL  YR +A  + R L   GL + E+G+ Q  DV  + E++ +
Sbjct: 201 PEVRDHDPLRALDGGPDGLEPYRILAAELPRLLLPGGLVAFEVGWGQAEDVAALVEAQGM 260

Query: 245 FLVNAFKDYGGNDRVLLFC 263
                  D GG  R +   
Sbjct: 261 GETAILCDLGGVKRCVRAR 279


>gi|110680313|ref|YP_683320.1| HemK family modification methylase [Roseobacter denitrificans OCh
           114]
 gi|109456429|gb|ABG32634.1| modification methylase, HemK family, putative [Roseobacter
           denitrificans OCh 114]
          Length = 271

 Score =  251 bits (642), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 138/263 (52%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   L     + + +V +     +         + +        + +++G R+FY
Sbjct: 15  DPARDARILLAHAAQVDAARVTLIAPEDMASDIIERYNHLVSLRAVRVPVSQLIGGREFY 74

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ +  +PRPETE L++ AL+             +LDLG G+G + + LL E P 
Sbjct: 75  GRRFEITREVLDPRPETESLIEVALS--------APFNTVLDLGVGSGCLIVTLLAERPD 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GV VD+S  A   A +NAV + V++R   L+SDWF +VEG FD+IVSNPPY+ +  + 
Sbjct: 127 ATGVAVDLSEAACLQASANAVLHEVADRVQVLKSDWFDAVEGRFDLIVSNPPYLAASEMA 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  E+RD +PR++L    DGL+ YR IA     +L+ DG   VE G+ Q  DV  IFE+
Sbjct: 187 QVQPELRDHEPRLALTDEADGLTAYRVIAAEAQGYLSADGRVLVETGWRQASDVRDIFEA 246

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +    ++   D GG DR++   +
Sbjct: 247 QGWGELSILPDLGGRDRIVSASK 269


>gi|71892128|ref|YP_277860.1| N5-glutamine methyltransferase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796234|gb|AAZ40985.1| N5-glutamine methyltransferase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 278

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 8/261 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +   RD+   L +VT  S  Q++   +S+L+      L + I R  K E I  ++G ++F
Sbjct: 18  ISPKRDAEIILGQVTKKSRAQLLAFGESLLEYDTIIQLKSLIYRRKKGEPIAYLVGSKEF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +S  TF PRP+TE LV          + K   + +LDLGTG G + LAL  E P
Sbjct: 78  WSLDLKVSPGTFIPRPDTECLVKHVFD-----LLKVSHLNVLDLGTGVGTIALALASERP 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
            +   G+D   KAL +A  N       +    +  DWF  +    F++IVSNPPYI+   
Sbjct: 133 NWNITGIDCQKKALFLAHKN-KLLLNFKNVKFIYGDWFKYLRNKKFNLIVSNPPYIDKND 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             CL      F+P+ +L     GL     I    ++HL ++G   +E G+NQ   +  +F
Sbjct: 192 -SCLQFRDMIFEPKNALVSKQKGLEDLTVICKYSTQHLRQNGWLVLEHGWNQGNYMRALF 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  ++  +DY   +RV 
Sbjct: 251 FKFGFTHIHTIRDYHHYERVT 271


>gi|160871959|ref|ZP_02062091.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rickettsiella grylli]
 gi|159120758|gb|EDP46096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rickettsiella grylli]
          Length = 280

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 9/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A  D+      V  L+  Q+   P D ++   Q   + + I R  K E I  +LG ++F+
Sbjct: 21  AYLDTELLFSEVLKLTRAQLHSQPLDRLITITQEKRIKHVIARRQKGEPIAYLLGRQEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L ++ D   PRPETELLV+  L          +  +I+DLGTG+ A+ +AL  E P 
Sbjct: 81  SFMLEVTPDVLIPRPETELLVEVLLENF-----STEPRKIVDLGTGSAAISVALAWERPT 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179
           ++ +  D S  AL++AK N     +    +  +  W  ++     FD I+SNPPY+    
Sbjct: 136 WQLLATDCSMAALQVAKRNISRYHLQ-TIELRKGYWCEALNVGEKFDGILSNPPYLARND 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                     ++P+ +L  G  GL     I      +L+  G+  +E G  Q   V   F
Sbjct: 195 PHLQSEPGLAYEPKNALISGEKGLDDLERIIIQSREYLHPGGILFLEHGAQQATLVEEFF 254

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +     +  +KD  G+ RV
Sbjct: 255 LNYGYHEIKNYKDLAGHQRV 274


>gi|83816659|ref|YP_446173.1| hemK protein [Salinibacter ruber DSM 13855]
 gi|294508099|ref|YP_003572157.1| protein methyltransferase [Salinibacter ruber M8]
 gi|83758053|gb|ABC46166.1| hemK protein [Salinibacter ruber DSM 13855]
 gi|294344427|emb|CBH25205.1| Protein methyltransferase [Salinibacter ruber M8]
          Length = 303

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 122/261 (46%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R +   L  +       +   PD  +           + R ++ E +  ILG+  FY 
Sbjct: 37  PRRTAEWLLAELLDCDRAHLYAHPDRTVAAAAAEQFHRMVGRRVQGEPLQHILGYASFYG 96

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +S D   PRPETE +VD AL      IE+    R+LD GTG+G + LAL  E P  
Sbjct: 97  LRLRVSPDVMVPRPETETVVDRALTC----IEEVSRPRVLDAGTGSGCIALALKHERPDA 152

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFD--TLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           +    D+S  AL +A++NA   G+  RF    L ++  ++     D++VSNPPYI     
Sbjct: 153 EVHACDVSTDALAVARANAQDLGLDVRFFEGDLCAEVPAATPRDVDLLVSNPPYIPDAEA 212

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L   VR++DP  SL  G D L  YR +   VS      G   +E+      +V R+F 
Sbjct: 213 ESLPPVVREYDPDRSLFAGRDPLRFYRALVRWVSACCVPGGSFVLEVHAEHAAEVERLFR 272

Query: 241 -SRKLFLVNAFKDYGGNDRVL 260
               +  V+  +D  G  R++
Sbjct: 273 GEEGVGAVHTEEDLSGRPRIV 293


>gi|325694523|gb|EGD36432.1| protein-(glutamine-N5) methyltransferase [Streptococcus sanguinis
           SK150]
          Length = 276

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 11/262 (4%)

Query: 3   ALRDSHSF--LCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  ++ S   + R    LS    ++   + ++      L       L H+    I+G  D
Sbjct: 17  AGEEAESLSFVYRALNRLSFTDFVLKLRAEVNQEDHKQLKAIQEHLLAHKPAQYIIGSSD 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +      PRPETE LV+  L+ +         + +LD+GTG+GA+ LAL    
Sbjct: 77  FHGLTLKVDERVLIPRPETEELVELILSEN-----PESSLSVLDIGTGSGAIALALANSR 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P ++    D+S  AL +A  NA +  +S     +QSD   ++   FD+IVSNPPYI    
Sbjct: 132 PNWQITASDLSDDALALAAENAQSCNLS--LTFVQSDCLDAISVNFDIIVSNPPYISEAD 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +GL V   +P ++L    D  + YR IA     +L + G   +EIGY Q   V  + 
Sbjct: 190 KDEVGLNVLTSEPHMALFAEEDSYAVYRKIAGQAGDYLTEKGKIYLEIGYKQGDGVRELL 249

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
           +       +   KD  G DR++
Sbjct: 250 KKSFPQKRIRVLKDQFGKDRMV 271


>gi|292669719|ref|ZP_06603145.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC
           43541]
 gi|292648516|gb|EFF66488.1| protein-(glutamine-N5) methyltransferase [Selenomonas noxia ATCC
           43541]
          Length = 292

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 3/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  V G     + V  D  +    R    +       H  +  +LG R+F 
Sbjct: 26  NPRLDAEVLLSAVLGKDRTYLYVHFDEPIASAARTLFRSYAKERGAHVPLAYLLGRREFM 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   ++ DT  PRP+TE+L   A+ F   R       +   D+GTGTGA+ L++L  + 
Sbjct: 86  GLEFRVTRDTLIPRPDTEILAQFAVDFLRARRAAGASDLTAADIGTGTGAIALSVLHYTE 145

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 VDIS  A + A+ NA   G++ R +    D    + G  +DVI+SNPPYI S  
Sbjct: 146 NTYADAVDISPVAADTARENAERLGLTTRIEIHVGDLLVPLAGRTYDVILSNPPYIPSAD 205

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  EVR ++PR++LDGG DGL  YR +       L   G  +VE+G     D   + 
Sbjct: 206 IEGLMPEVRGYEPRLALDGGADGLVFYRRMMAEAPSMLKNGGAIAVEVGIGAAADAAALV 265

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
            +   +      +D GG DRV++ 
Sbjct: 266 AAHPRIVRTEILRDLGGIDRVVVG 289


>gi|256830554|ref|YP_003159282.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM
           4028]
 gi|256579730|gb|ACU90866.1| modification methylase, HemK family [Desulfomicrobium baculatum DSM
           4028]
          Length = 280

 Score =  251 bits (642), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 129/259 (49%), Gaps = 8/259 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  + G+    +++D  + +D+  R  +    VR +K E +  ++G ++FY     
Sbjct: 27  AQVLLAHILGMERLDMLLDVGAPVDEPCRLRMDELGVRRMKGEPVAYLVGEKEFYGFTFR 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPET    +  L   L  ++    +++LD+GTG+GA+ ++     P+     
Sbjct: 87  VGPGVLIPRPET----ELILDHLLESLDTNARLQVLDIGTGSGALAVSCANLFPYSCVAA 142

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185
           VDIS +AL++A  NA+ + V +R   LQ D   S+    FDV+++N PY+       L  
Sbjct: 143 VDISFEALKVACKNALLHDVQDRIVFLQGDLLESLRIDSFDVVLANLPYVPLTTKKTLSR 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV   +P  +L  G+DGL  YR +A  +S  +    L   EI ++Q + V+ +F      
Sbjct: 203 EVLCHEPHSALFSGLDGLDCYRALARSLSGAMKPGALLLCEIDHSQGLAVIDLFSGI-AQ 261

Query: 246 LVNAFKDYGGNDR--VLLF 262
            V   KDY G DR  +++F
Sbjct: 262 NVRILKDYAGLDRLAIVVF 280


>gi|325847860|ref|ZP_08170082.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480878|gb|EGC83931.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 263

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 80/253 (31%), Positives = 131/253 (51%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   + + + +  +  L+      L     +  K   +   +G  +FY + L +   
Sbjct: 18  LTYLLNTNKNLLYLKKEEKLEKDIEEKLLKIQDKISKGYPLQYAIGKWNFYGLDLLVDKR 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE+LVD  +       +K    +ILD+G+G+GA+ LAL       K +G+DIS
Sbjct: 78  ALIPRYETEILVDMIIN------DKVKKDKILDIGSGSGAISLALSYNLKNSKVLGIDIS 131

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A+ ++K N   N   +  +  +SD FS+VEG FD+IVSNPPYI     + L  +   +
Sbjct: 132 KDAINLSKEN-KKNLSIKNVEFKESDIFSNVEGKFDIIVSNPPYINKEDFENLDKK-LSY 189

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L GG DGL  YR I     + LNK+G   +EIGY+QK  ++ + +      + A+
Sbjct: 190 EPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNPIINLLKEEGYKDIRAY 249

Query: 251 KDYGGNDRVLLFC 263
           KD+   DR+++ C
Sbjct: 250 KDFNDFDRIIIAC 262


>gi|315223720|ref|ZP_07865570.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
           F0287]
 gi|314946295|gb|EFS98294.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga ochracea
           F0287]
          Length = 281

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 8/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L      S   ++ + D++L +     +   I      + I  ILG  +F++ R  ++
Sbjct: 29  ILLKHYGKYSKATILANSDTLLTEDIAQPILQVIRELQTAKPIQYILGETEFFSNRFFVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE LVD  L       +K + ++ILD+GTG+G + ++L K  P      +D
Sbjct: 89  ENVLIPRPETEELVDWVLQ---EYPDKSEKIKILDVGTGSGCIAISLAKALPNAVVTAID 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S  AL++AK NA  N V   F  LQ D     ++   +D+I+SNPPY+  +    +   
Sbjct: 146 VSEGALKVAKRNAELNNVVTHF--LQQDILRIETLPDKYDIIISNPPYVRELEKKEIRHN 203

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L     + L  Y  IA    + LN +G    EI      ++  + E +   
Sbjct: 204 VLEYEPHLALFVRDNNPLLFYDKIATLAQQSLNPNGSLFFEINQYLGQEMKTLLEQKHFT 263

Query: 246 LVNAFKDYGGNDRVL 260
            +   +D  GNDR++
Sbjct: 264 EITLRQDLFGNDRMI 278


>gi|289548685|ref|YP_003473673.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermocrinis albus DSM 14484]
 gi|289182302|gb|ADC89546.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermocrinis albus DSM 14484]
          Length = 270

 Score =  251 bits (642), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 7/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           + R+ H  L  +  ++   + +  D  +   +     + + R  +   +  +LG  +FY 
Sbjct: 14  SKREKHLLLAHILQVTPSDLYLMEDYEVPFNEVERYISMLSRLEEGYPLQYLLGEWEFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLV+  L      + K   ++  ++G GTG + + LL E P  
Sbjct: 74  RTFKVEEGVLIPRPETELLVEKILT----TVNKDRPLKGFEIGVGTGCISVTLLLEIPSL 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
                D++ KAL++A  NA  + V +R   ++   F  V G  F ++VSNPPYI   + D
Sbjct: 130 VMYADDVNPKALQLAYQNACMHQVQDRLYLMEGSLFEPVRGMRFHLVVSNPPYIPEGMWD 189

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V+ ++ + SL GG  G   Y  IA  +   L +DG+  +EIG++Q   V  IFE 
Sbjct: 190 SLPTTVK-WEGKTSLIGGPKGYEFYEKIASEIHHFLEEDGMFFLEIGHDQGSVVRDIFEE 248

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +    V  FKD  G DRV++  
Sbjct: 249 KGFR-VEVFKDLAGQDRVVVGW 269


>gi|325479469|gb|EGC82565.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 264

 Score =  251 bits (641), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 8/254 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   +   +I+     LD      L   I +  K   +   +G  +FY +   +   
Sbjct: 18  LTYLLDTNKSNIILRSGEELDKDISTRLYEIIDKFEKGYPLQYAIGEWEFYGLNFKVDKR 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD  +             +ILD+GTG+GA+ L+L K+    + +  DIS
Sbjct: 78  ALIPRFETEIIVDYLIK------SDWKKDKILDIGTGSGAIALSLGKKLGKSEILASDIS 131

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL++A+ N    GV      ++SD F  + G FD+I+SNPPYI     + L   +   
Sbjct: 132 DDALDLARENKKRIGV-HNVSFIKSDIFEEISGKFDIIISNPPYINKSDYENLDKRLY-H 189

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L    +GL  Y+ I    + +LN  G    EIGY+QK  +  +        +   
Sbjct: 190 EPKSALFAEENGLYFYKKIVSEANNYLNCGGKLVFEIGYDQKQSLFELLNKFDFKNLKCI 249

Query: 251 KDYGGNDRVLLFCR 264
           KDY   DR ++  +
Sbjct: 250 KDYNDFDRFIIAEK 263


>gi|257791637|ref|YP_003182243.1| modification methylase, HemK family [Eggerthella lenta DSM 2243]
 gi|257475534|gb|ACV55854.1| modification methylase, HemK family [Eggerthella lenta DSM 2243]
          Length = 345

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 76/313 (24%), Positives = 123/313 (39%), Gaps = 55/313 (17%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 30  AQWLLSEATGLSRIELYANFEQPLSMEERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92
           +      PRPETE+LV  ALA                                       
Sbjct: 90  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWPEDDLPPVPWPEGEAGEQRPERTAD 149

Query: 93  -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                              +   + + DL TG+G +  ++  E P  + V  DI  +A+ 
Sbjct: 150 QGVAEDESTPAVASGEPAPEPPELLVADLCTGSGCIACSVAYEHPLARVVATDIVPEAVA 209

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F+
Sbjct: 210 LARDNVAALELGDRVEVLSCDLGEGVDPTLMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V    
Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLDEAARLAEEAGFSDVRVTA 329

Query: 252 DYGGNDRVLLFCR 264
           D  G  RVL   +
Sbjct: 330 DLAGRPRVLTARK 342


>gi|71065791|ref|YP_264518.1| HemK family modification methylase [Psychrobacter arcticus 273-4]
 gi|71038776|gb|AAZ19084.1| probable modification methylase, HemK family [Psychrobacter
           arcticus 273-4]
          Length = 305

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 28/284 (9%)

Query: 3   ALRDSHS-------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL 55
           A  D+         +L  V    +  +I D +  L D +       + +  +   +  + 
Sbjct: 21  AATDAAIPQFWITDWLLYVIDKPALFLITDDNYQLSDSETERFNAGMTKMQQGTPLAYLT 80

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR----IEKRDVVRILDLGTGTGAV 111
           G + F+++  T++  T  PRP+TE+LV++ L +   +          +R+LDLGTG+G +
Sbjct: 81  GTQAFWSLDFTVNEHTLIPRPDTEVLVETVLDWIKSQPFSTTPTLKSMRLLDLGTGSGCI 140

Query: 112 CLALLKESP--------FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-- 161
            ++L  E           ++ V VD S +AL+IA+ NAV+N V      + S W+  +  
Sbjct: 141 AISLAHELKLADTLKQVSWQVVAVDFSLEALKIAQHNAVSNAVE--VTFVHSSWYDELPT 198

Query: 162 --EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E LFDVIVSNPPYI+       GL     +P  +L     GL+    I     ++L  
Sbjct: 199 QDEQLFDVIVSNPPYIDEADEHLAGLLA---EPISALSAPNHGLADIEHIVYYAPQYLKV 255

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            GL ++E GY+Q   V ++F       +   KD+GGNDR+ L  
Sbjct: 256 GGLLAIEHGYDQGQAVRQLFADNHFDNIRTIKDFGGNDRMTLGQ 299


>gi|294615326|ref|ZP_06695201.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1636]
 gi|294617195|ref|ZP_06696847.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1679]
 gi|291591829|gb|EFF23463.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1636]
 gi|291596540|gb|EFF27781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1679]
          Length = 279

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKPNGNIFLEIGFRQGKAVKKIFQQAFPHK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVKIKKDLFGNERMI 275


>gi|159896800|ref|YP_001543047.1| HemK family modification methylase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889839|gb|ABX02919.1| modification methylase, HemK family [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 283

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 9/263 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   L  V GL+  Q++   +  L   Q       I R    E I  ++G R+F
Sbjct: 22  LTPQLDARVLLGHVLGLTQTQILAAFNDQLSTEQVEQFQGLIERRSALEPIAYLIGSREF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   +      PRP+TE+LV+ AL +      ++  + + D+GTG+G + +A+ K +P
Sbjct: 82  YGLMFNVDRRVLVPRPDTEILVEQALTWIKQ---QQRPLVVADIGTGSGCIAVAVTKHAP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             K   VD+S  AL +A+SN   +G+ ++ + +  D  S +    D+++SNPPY    ++
Sbjct: 139 TIKMYAVDLSPAALAVAQSNVERHGLQQQIELIHGDGVSQLPEPIDLLLSNPPY---TLL 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVDVVRI 238
           D +   VR  +P ++LDGG DGL  YR +    +  L +        EIG  Q  +V+ +
Sbjct: 196 DEIEPGVRLHEPTLALDGGPDGLDCYRQLLPATAAILRQGLPSAALFEIGAWQGSEVIAL 255

Query: 239 FESR-KLFLVNAFKDYGGNDRVL 260
            ++      +   +D    DRV+
Sbjct: 256 AQASFPQAKIQLVRDLAARDRVV 278


>gi|327484700|gb|AEA79107.1| Methylase of polypeptide chain release factor [Vibrio cholerae
           LMA3894-4]
          Length = 256

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 82/240 (34%), Positives = 115/240 (47%), Gaps = 9/240 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R    E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPTLASLELLLARRRAGEPMAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALDKAALID-----GELLDLGTGTGAIALALASELPTR 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +  G+D+  +A E+A+ NA    +      LQ  WFS +     F +IVSNPPYIE    
Sbjct: 139 QVTGIDLRPEAAELARENATRLAI-HNAQFLQGSWFSPLADGTKFALIVSNPPYIEENDP 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+P+ +L    +GL+  R I+    R L   G    E GY+Q V V   F 
Sbjct: 198 HLSLGDVR-FEPKSALVAAENGLADIRHISTHAPRFLLDGGWLLFEHGYDQGVAVRTDFA 256


>gi|225870518|ref|YP_002746465.1| methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|225699922|emb|CAW93853.1| putative methyltransferase [Streptococcus equi subsp. equi 4047]
          Length = 282

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 123/256 (48%), Gaps = 12/256 (4%)

Query: 11  LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           L  V       +S   ++  +  +    +  L    +   +H S   I G   F ++ L 
Sbjct: 24  LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + S    PRPETE LV+  L  +           +LD+GTG+GA+ +AL K  P ++   
Sbjct: 84  VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL +A SNA+ + V   F+  QSD FS + G FD+IVSNPPYI     D +GL 
Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--QSDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V   +P ++L    +G S YR I +  S +L   G    EIGY Q   + R+   R    
Sbjct: 197 VYQSEPHLALFAAENGFSIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256

Query: 246 LVNAFKDYGGNDRVLL 261
            +   KD  G +R+++
Sbjct: 257 RIRVLKDMLGKERMVV 272


>gi|28378949|ref|NP_785841.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|300766722|ref|ZP_07076639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308181159|ref|YP_003925287.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|28271786|emb|CAD64692.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|300495822|gb|EFK30973.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308046650|gb|ADN99193.1| protoporphyrinogen oxidase (putative) [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 288

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 80/256 (31%), Positives = 122/256 (47%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  ++ L   Q+++     L           I R +  E +  +LG   FY + L 
Sbjct: 30  ARFLLLGLSRLDQTQLLIRYREPLPSAVWHAYQQGIDRVVAGEPVQYVLGDAPFYGLTLQ 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PR ETE LVD  L      +     VR+LD+GTG+GA+ LA+  E P ++   
Sbjct: 90  VDPAVLIPRVETEELVDWILTD----VPATAPVRLLDVGTGSGAIALAIKHERPAWEITA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            DIS  AL++AK+NA    +      + SD  +SV    FD+IVSNPPYI +   D +  
Sbjct: 146 SDISTAALQVAKANADRLHLD--VKLVHSDLLTSVSAQPFDIIVSNPPYIAASEKDVMDA 203

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P+ +L    DGL+ Y  +A  V+ HL   G   +E GY+Q   +  +F      
Sbjct: 204 SVLAHEPQTALFADHDGLALYEQLATTVADHLTSTGRLYLEFGYHQGPALQTLFAQSMPD 263

Query: 245 FLVNAFKDYGGNDRVL 260
             V   +D  G++R+L
Sbjct: 264 ATVTLRQDMAGHNRML 279


>gi|331701219|ref|YP_004398178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128562|gb|AEB73115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus buchneri NRRL B-30929]
          Length = 282

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 130/256 (50%), Gaps = 8/256 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L ++  +S+  +++   + +  +Q     +AI + LK      ++G  DFY + L
Sbjct: 30  DVDFLLEKLFKMSAADLLIHYHTQMPVKQWRVFQDAIGQLLKGVPPQYVVGEADFYGLSL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR ETE LVD  LA +         +++LD+GTG+GA+ +AL    P ++  
Sbjct: 90  KVTPAVLIPRVETEELVDWILADN-----SDSKLKVLDIGTGSGAIAIALKHARPHWQVF 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS  A+++A+ NA+ N  +     + SD F++++  FDVIVSNPPYI       +  
Sbjct: 145 ASDISLPAIKVARQNAIANHTA--IHFMVSDVFAAIDESFDVIVSNPPYIAKDEQSYMDA 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P ++L     GL+ Y+ IA     HL   G   +EIG+ Q+  V  IF++    
Sbjct: 203 SVIKSEPDLALYAKDQGLAIYKQIAADAESHLTSKGRLYLEIGFQQQSAVTEIFQAAMPD 262

Query: 245 FLVNAFKDYGGNDRVL 260
             V A  D  G+ R++
Sbjct: 263 AQVIAKHDVSGHQRMI 278


>gi|157694095|ref|YP_001488557.1| polypeptide chain release factor methyltransferase [Bacillus
           pumilus SAFR-032]
 gi|157682853|gb|ABV63997.1| polypeptide chain release factor methyltransferase [Bacillus
           pumilus SAFR-032]
          Length = 295

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +   L  V  LS  +++      L D Q       + +  K   +  ++G  
Sbjct: 21  EAGRDQNAAELLLMHVLDLSRSELLARFHDQLPDEQDRLFREFVTQHKKGVPVQHLIGIE 80

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++     PRPETE +V +AL            ++ +D+GTG+GA+ + L  E
Sbjct: 81  FFYGRPFEVNKHVLIPRPETEEVVLAALNLMSDIFPHDQPLKAVDVGTGSGAIAITLALE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYI 175
                    DIS +AL +AK N    G       LQ D    ++      D+ +SNPPYI
Sbjct: 141 KETLSVTATDISHEALAVAKRNQQALGAD--VHFLQGDLLEPIKDQGIKVDLFISNPPYI 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +  L   V   +P  +L  G DGL  Y+ +   +   L++  +   EIG+ Q  DV
Sbjct: 199 AADEMGGLSEVVTKHEPVNALTDGRDGLWFYKRLVRDLHHVLHEQAVVVFEIGHKQAQDV 258

Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260
              + +S     V   KD  G DR +
Sbjct: 259 KTLLLQSFPAADVRIVKDINGKDRAV 284


>gi|94271211|ref|ZP_01291906.1| Modification methylase HemK [delta proteobacterium MLMS-1]
 gi|93450531|gb|EAT01681.1| Modification methylase HemK [delta proteobacterium MLMS-1]
          Length = 325

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 2   QALRDSHSFLCRVT---------GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52
           +A +++   L  V                +++  D  L   Q   L  A  R  + E + 
Sbjct: 37  EAGQEAELLLSWVLAAGQKGHQAWDDRAGLVLAADRPLSSAQIEKLRQAAARRGRREPLA 96

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAV 111
            I+G  +F+++   +      PRPETELLV+ AL  +   R      + ILDLGTG+G +
Sbjct: 97  YIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLAPQLRGGAGRPLTILDLGTGSGIL 156

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVI 168
            + L +E    + + VD S  AL +A+ N   + V  R   L +DW S++   + LFD++
Sbjct: 157 AVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKALFDLV 216

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPPY+E V +  L  EVRD++PR +LDGG  G++  R +A  +   L   G   +EIG
Sbjct: 217 VANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGLLMEIG 276

Query: 229 YNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264
           ++Q+  V ++         V    D  G  R LL CR
Sbjct: 277 WDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLRCR 312


>gi|325568364|ref|ZP_08144731.1| protein-(glutamine-N5) methyltransferase [Enterococcus
           casseliflavus ATCC 12755]
 gi|325158133|gb|EGC70286.1| protein-(glutamine-N5) methyltransferase [Enterococcus
           casseliflavus ATCC 12755]
          Length = 285

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                +         ++  D  +       +   + + L+HE    +LG+ +FY  RL +
Sbjct: 27  QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV++ LA    ++     +R++D+GTGTGA+ +AL    P +    V
Sbjct: 87  TPATLIPRPETEELVENCLA----KLPADQPLRVVDIGTGTGAIAIALKLARPQWSVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL +AK NA   G   RF   Q D    V +  +D+IVSNPPYI +     + + 
Sbjct: 143 DLSAEALAVAKENATALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR+ +P+++L     GL+ Y+ +A    + L   G  ++EIG+ Q   V ++F +     
Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPKCLAPSGQMALEIGFQQGQAVQQLFAAAFPNK 260

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD  G DR++ 
Sbjct: 261 EVTVVKDLAGQDRMVF 276


>gi|317478585|ref|ZP_07937742.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36]
 gi|316905226|gb|EFV27023.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 4_1_36]
          Length = 278

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 110/267 (41%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S     +  D +L  +    L + + R    E I  + G   F 
Sbjct: 20  EAANLSRIVCCEMLGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + + L KE P 
Sbjct: 80  GRTFRVAPGVLIPRPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESV 178
            +    DIS +AL IA  N      S +F  +Q D      + +  FDVIVSNPPY+   
Sbjct: 134 AEVTAWDISGEALAIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTET 191

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V +++P  +L     D L  YR I +     L   G    EI       V  
Sbjct: 192 EKKDMEPNVLNWEPSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVAS 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +    V   KD  GNDR ++  R
Sbjct: 252 MLRKQGYTNVRIRKDISGNDRYVIAER 278


>gi|253564133|ref|ZP_04841590.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947909|gb|EES88191.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301161571|emb|CBW21111.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 638R]
          Length = 278

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
               C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     +
Sbjct: 26  KIICCDLLGQDAIDYYLGKDITLSVNEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       
Sbjct: 86  APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL IA  N         F+ +       V +  +D+IVSNPPY+     + +   
Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++PR++L     D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 200 VLDWEPRLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVLQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|126728794|ref|ZP_01744609.1| modification methylase, HemK family protein [Sagittula stellata
           E-37]
 gi|126710724|gb|EBA09775.1| modification methylase, HemK family protein [Sagittula stellata
           E-37]
          Length = 281

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 121/264 (45%), Gaps = 11/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+   +  V  +   ++ +     +D          I R      +  ++G R FY
Sbjct: 21  DPGRDARRLMAHVLKVPPGRLTLFLPEEVDPELEVVYLTLIERRADRVPVSHLVGRRAFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++ +  +PRPETE L++ AL+             +LDLGTG+G + L LL E   
Sbjct: 81  GRDFLVTPEVLDPRPETETLIEVALS--------EPFGTVLDLGTGSGCILLTLLAERDD 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
             G G D+S  AL +A  N     +  R +  +  W+ ++   + LFD+IVSNPPYI   
Sbjct: 133 AVGYGTDVSASALNVAHWNRNALNLEGRAEFCEGSWYGALGQMDELFDLIVSNPPYIAVN 192

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  EVRD +PR++L    DG + Y  I  G +R L   G    EIG  Q + V ++
Sbjct: 193 EMPFLSPEVRDHEPRLALTDEADGQTAYHAILAGHARWLAPGGRLVAEIGATQGMAVSKL 252

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
           F    L  V    D  G DRV++ 
Sbjct: 253 FARAGLRGVRVIPDIDGRDRVVVG 276


>gi|326800778|ref|YP_004318597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobacterium sp. 21]
 gi|326551542|gb|ADZ79927.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingobacterium sp. 21]
          Length = 286

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 10/263 (3%)

Query: 6   DSHSF----LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ S     L  + G S   +++     L+D Q   L +A  R    E +  I+G   F 
Sbjct: 22  EAESIFLVVLEDLLGYSRRDLLLHKSMSLNDEQLDQLEDAASRISAGEPVQYIIGHTPFM 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETE LVD  +     ++      +++D+GTG+G + +A+ K    
Sbjct: 82  GLSLHVNQHVLIPRPETEELVDLIIQDL--KLSNSSESKLIDIGTGSGCIPIAIKKYVNQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            +   +D+S +AL +AK NA  N     F   D L+ D   + E  FDVIVSNPPYI + 
Sbjct: 140 AQVYALDVSVEALAVAKQNAADNQCPVHFMLADILEWDIIFAEEVKFDVIVSNPPYITNS 199

Query: 179 IVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V  F+P ++L       L  Y TIA     HL K G    EI  N   +V  
Sbjct: 200 EQKGMHPNVLQFEPHLALFVEDQAPLLFYETIAAFALAHLEKGGKLYFEINRNFGQEVKD 259

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           +   +    +   +D  G DR++
Sbjct: 260 LLTKKGFKNILLKQDIHGADRMV 282


>gi|262382449|ref|ZP_06075586.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298374644|ref|ZP_06984602.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19]
 gi|262295327|gb|EEY83258.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298269012|gb|EFI10667.1| protein-(glutamine-N5) methyltransferase [Bacteroides sp. 3_1_19]
          Length = 318

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 46/300 (15%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       + RV GLS+HQ+++     L D ++F +   +     ++ I  +LG  DFY
Sbjct: 20  EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PRPET  LV+  +             RILD+GTG+G + ++L K  P 
Sbjct: 80  GMEFKVTPDVLIPRPETAELVERIITDYR-----GQAPRILDIGTGSGCIAISLAKHLPK 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF-----------DTLQSDWFSSVE-------- 162
            +   VDIS +AL +A+ NA  N VS  F             +Q      VE        
Sbjct: 135 AEVAAVDISPEALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKE 194

Query: 163 ---------------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200
                                G F+ IVSNPPYI +     +   V + +P ++L     
Sbjct: 195 NKSFTYMKPKSHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDD 254

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D L  YR IA    RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|212702186|ref|ZP_03310314.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098]
 gi|212674391|gb|EEB34874.1| hypothetical protein DESPIG_00197 [Desulfovibrio piger ATCC 29098]
          Length = 300

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 6/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++      V  L    +++   S + D     +     R    E +  I G R+F+ 
Sbjct: 40  PALEARLLAGHVLHLDRIGLMLAMPSPVADDAAGAIRALTARRCAGEPLAHITGRREFFG 99

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S  T  PRPETELL++  L       E    VR  DLGTGTG + + L  E P  
Sbjct: 100 RDFEVSPQTLIPRPETELLLEIVLRECAGHGE----VRFADLGTGTGCIGITLALELPHS 155

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIV 180
           +G+ ++ S  AL +A  N  +   ++R   ++ D F+   + G  DV+VSNPPYI +   
Sbjct: 156 RGLLLEYSAGALPVAARNIRSLQAADRLALVRGDMFTPPLLPGGLDVLVSNPPYIAAAEE 215

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D +  EV   +P  +L    DGL H   +     R L   GL  +E GY Q   V R+  
Sbjct: 216 DEVMAEVLHHEPHSALFSEQDGLRHLHAVIRAGQRALKPGGLIVMEHGYRQGGAVRRLLA 275

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                     +D  G DR     R
Sbjct: 276 EVGYSEPRTEQDLAGLDRCTWARR 299


>gi|258614611|ref|ZP_05712381.1| hemK protein [Enterococcus faecium DO]
 gi|260560330|ref|ZP_05832506.1| modification methylase HemK [Enterococcus faecium C68]
 gi|293563061|ref|ZP_06677527.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1162]
 gi|294623634|ref|ZP_06702472.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium U0317]
 gi|314947686|ref|ZP_07851095.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0082]
 gi|260073675|gb|EEW62001.1| modification methylase HemK [Enterococcus faecium C68]
 gi|291596960|gb|EFF28173.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium U0317]
 gi|291604975|gb|EFF34443.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1162]
 gi|313645927|gb|EFS10507.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0082]
          Length = 279

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|265765180|ref|ZP_06093455.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_16]
 gi|263254564|gb|EEZ25998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_16]
          Length = 278

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 8/259 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
               C + G  +    +  D  L   ++  L + + R  K+E I  I G   FY     +
Sbjct: 26  KIICCDLLGQDAIDYYLGKDITLSANEQCDLESIVERLKKNEPIQYIQGETCFYGSMFRV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LVD  +       E     R+LD+GTG+G + ++L K  P       
Sbjct: 86  APGVLIPRPETEELVDLIVK------EAATGTRLLDIGTGSGCIAISLAKHIPQAVVTAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL IA  N         F+ +       V +  +D+IVSNPPY+     + +   
Sbjct: 140 DVSEEALAIAGENNRELKAGVHFEKMDVLSAEPVGDDQYDMIVSNPPYVTESEKNEMEPN 199

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++P ++L     D L  YR IA    + L   G    EI      +V+++   +   
Sbjct: 200 VLDWEPGLALFVPDNDPLRFYRRIASLGRKMLRLHGRLYFEINRAYGEEVIQMLHEQGYE 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD  GNDR++   R
Sbjct: 260 ELRLIKDISGNDRIVTAKR 278


>gi|150026062|ref|YP_001296888.1| methylase of polypeptide chain release factors [Flavobacterium
           psychrophilum JIP02/86]
 gi|149772603|emb|CAL44086.1| Methylase of polypeptide chain release factors [Flavobacterium
           psychrophilum JIP02/86]
          Length = 285

 Score =  250 bits (640), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 2/253 (0%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     L    +++ PD  LD+ Q       +++  + + I  ILG   F+ +   ++
Sbjct: 29  IILEAFHQLKRVDLVLSPDLKLDNIQLLQWETVLLQLKEQKPIQYILGETQFFGLPFYVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +T  PRPETE LV+  +  +L +I     ++ILD+GTG+G + ++L K  P      +D
Sbjct: 89  ENTLIPRPETEELVEWIIKENL-KISSLKNLKILDIGTGSGCIAISLAKNLPNASVFAID 147

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S KAL  A+ NAV N V   F          +   FD+IVSNPPY+ ++    +   V 
Sbjct: 148 VSDKALATAQKNAVLNEVDITFIEKNILQTEDLNQEFDIIVSNPPYVRNLEKKEIHKNVL 207

Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +++P ++L     D L  YR I +  +R+L+ +G    EI      + V + E       
Sbjct: 208 EYEPHLALFVEDNDSLLFYRKITELATRNLSNNGQLYFEINQYLGKETVELLEKYNFKNT 267

Query: 248 NAFKDYGGNDRVL 260
              KD  GNDR++
Sbjct: 268 TLKKDIYGNDRMI 280


>gi|254523856|ref|ZP_05135911.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas sp. SKA14]
 gi|219721447|gb|EED39972.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Stenotrophomonas sp. SKA14]
          Length = 285

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++A  ++   L  V       +       L   +       + R +  E +  + G R F
Sbjct: 23  IEARHEAELLLLHVLERPRSWLFAHATDPLPAAELATFETLLARRVAGEPVAYLTGRRGF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L +   T  PRPETELLV+ AL     R+     +++ DLGTG+GA+ LAL  E P
Sbjct: 83  WTLDLEVDPATLIPRPETELLVELALD----RLPLDRALQLADLGTGSGAIALALASERP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             + +  D S  AL +A  NA  + +   RF     DW++ ++G  FD+I SNPPYI S 
Sbjct: 139 QAQVLATDASPGALAVAARNAARHELHNVRFAEGGHDWYAPLQGARFDLIASNPPYIASD 198

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P  +L  G+DGL   R I DG   HL   G   +E G+ Q   +  +
Sbjct: 199 DPHLQQGDLR-FEPATALASGVDGLDDIRRIVDGGQAHLLPGGWLLIEHGWGQGEAIRAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           FE+ +   V   +D    DR+ L  R
Sbjct: 258 FEAARFADVQTVQDLEQRDRITLGRR 283


>gi|294777681|ref|ZP_06743132.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides vulgatus PC510]
 gi|319640267|ref|ZP_07994992.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
 gi|294448749|gb|EFG17298.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides vulgatus PC510]
 gi|317388042|gb|EFV68896.1| protoporphyrinogen oxidase [Bacteroides sp. 3_1_40A]
          Length = 278

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +V G+S  ++    D+     +R  L + +VR  K E I  I+G  +FY +   
Sbjct: 25  AKLLLTQVFGMSVVELYAGKDTTFSVNERKQLDDILVRLQKLEPIQYIIGTEEFYGLTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  LVD  +     R  K   VRILD+GTG+G + ++L K     + V 
Sbjct: 85  VNKHVLIPRPETGELVDWII-----REHKYGRVRILDIGTGSGCIAVSLAKNLEEAEVVS 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S K L++A+ N   NGV    +       S     FDVIVSNPPYI       +   
Sbjct: 140 WDVSEKVLQVAERNCRRNGVRVTLEQRDVLLASPAGERFDVIVSNPPYITEKERADMSAN 199

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V +++P ++L    D  L  YR IA+     L   G    EI      + V +    +  
Sbjct: 200 VLEWEPELALFVPDDSPLLFYRKIAELGRDMLVSGGRLYFEINQEYGRETVDMLAGLEYK 259

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   +
Sbjct: 260 NIELRKDLFQNDRMIKAEK 278


>gi|297183484|gb|ADI19615.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF0770_37D02]
          Length = 282

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  + G S   ++V+    +  +      +AI R +K E I  I G ++F++  
Sbjct: 24  LDAEIILSDIMGTSKEFLMVNNQINISKKTIKKYNSAIKRRIKKEPIAYITGKKEFWSQD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRPETELL+   + F   R      + +LD+GTG+G + L++LKE  F  G
Sbjct: 84  FAVNQATLVPRPETELLIYWVINFFKNR-----KINVLDIGTGSGCILLSILKELNFSTG 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DIS KA++ A+ N+    V  R      D      G +D+IVSNPPYI S  +  L 
Sbjct: 139 TGIDISAKAIKTARVNSKNLNVVYRSKFKVFDLSKFNIGKYDLIVSNPPYIPSKDIKNLS 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++ + +P ++L GG DGL   + +    +  L ++GL ++EIGY Q   V  I +    
Sbjct: 199 KDIINHEPLVALKGGFDGLDLIKKVIYKSNYLLKRNGLLAIEIGYRQYQKVSSILKKHGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +    D+  N R ++  +
Sbjct: 259 REIRKEYDFNHNVRCIISTK 278


>gi|319650893|ref|ZP_08005030.1| modification methylase [Bacillus sp. 2_A_57_CT2]
 gi|317397491|gb|EFV78192.1| modification methylase [Bacillus sp. 2_A_57_CT2]
          Length = 284

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 9/268 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           ++ RD       L     ++    + +    L+         A+      + +  I+G  
Sbjct: 16  ESNRDENAGELLLQHFMKMTRASFLANLREDLNPEVLDEFQKAVQSHAAGQPVQYIIGSE 75

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +FY     ++ D   PRPETE LV +AL          + + + D+GTG+GA+ + +  E
Sbjct: 76  EFYGRAFQVNEDVLIPRPETEELVYNALQKINKLFGSVNGLEMADIGTGSGAIAVTMKLE 135

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
            P       DI    LE+A+ NA  NG     D  Q D    +      FD+I+SNPPYI
Sbjct: 136 KPELNVTATDIYGPTLELAEKNAEQNGAE--IDFYQGDLLQPLISKGKKFDIILSNPPYI 193

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               ++ +   V + +P  +L  G DGL  YR   + +   +    +   E+G  Q   V
Sbjct: 194 PEKDIEWMSDIVTEHEPHRALFAGEDGLDLYRRFMEELPAVIKDRAIIGFEVGAGQSEAV 253

Query: 236 VRIFESR-KLFLVNAFKDYGGNDRVLLF 262
             + +       V    D  G DR++  
Sbjct: 254 SLLLKQAFPQANVETVYDINGKDRMVFA 281


>gi|225868514|ref|YP_002744462.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225701790|emb|CAW99202.1| putative methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 282

 Score =  250 bits (639), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 12/256 (4%)

Query: 11  LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           L  V       +S   ++  +  +    +  L    +   +H S   I G   F ++ L 
Sbjct: 24  LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + S    PRPETE LV+  L  +           +LD+GTG+GA+ +AL K  P ++   
Sbjct: 84  VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL +A SNA+ + V   F+  +SD FS + G FD+IVSNPPYI     D +GL 
Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V   +P ++L    +G + YR I +  S +L   G    EIGY Q   + R+   R    
Sbjct: 197 VYQSEPHLALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256

Query: 246 LVNAFKDYGGNDRVLL 261
            +   KD  G +R+++
Sbjct: 257 RIRVLKDMLGKERMVV 272


>gi|301308352|ref|ZP_07214306.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Bacteroides sp. 20_3]
 gi|300833822|gb|EFK64438.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Bacteroides sp. 20_3]
          Length = 318

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 46/300 (15%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       + RV GLS+HQ+++     L D ++F +   +     ++ I  +LG  DFY
Sbjct: 20  EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PRPET  LV+  +             RILD+GTG+G + ++L K  P 
Sbjct: 80  GIEFKVTPDVLIPRPETAELVERIITDYR-----GQAPRILDIGTGSGCIAISLAKHLPK 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF-----------DTLQSDWFSSVE-------- 162
            +   VDIS +AL +A+ NA  N VS  F             +Q      VE        
Sbjct: 135 AEVAAVDISPEALAVAEENARLNQVSVSFLELDILSEGYPSFMQGKLKFHVEETKVSRKE 194

Query: 163 ---------------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200
                                G F+ IVSNPPYI +     +   V + +P ++L     
Sbjct: 195 NKSFTYMKPKSHTEETAVSPIGNFNCIVSNPPYIMNKEKATMEANVLENEPHLALFVPDD 254

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D L  YR IA    RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|144897746|emb|CAM74610.1| modification methylase, HemK family [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 281

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G+   +++  P+ VL  +Q+  +     R    + I  ILG R F+ 
Sbjct: 23  ARLDARLLVAEALGVEPLRLVTHPEMVLTAQQQTAIEGMAARREDRQPISHILGRRGFWT 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++ DT +PRP+TE LV   L     R      +RI+D GTG+G + LALL E P  
Sbjct: 83  LDLRVTPDTLDPRPDTETLVQGVLDRVADR---HAALRIVDFGTGSGCILLALLAELPNA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D S  AL +A  NA  NG++ R +    DW   ++G FD+IVSNPPYI    +  
Sbjct: 140 HGLGIDQSAAALAVAAENAERNGLAGRAEFRHGDWGRGLDGPFDIIVSNPPYIPEADIAG 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   +PR +L GG DGL  YR +A  ++R L   G+  +E+G  Q  DV  + ++ 
Sbjct: 200 LEPEVARHEPRSALVGGADGLDCYRALAPDIARLLAVGGITGLEVGAGQDSDVAALLKAA 259

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L  +    D  G+ R +   R
Sbjct: 260 GLRDLCVADDLAGHGRSVFAAR 281


>gi|313899751|ref|ZP_07833254.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. HGF2]
 gi|312955366|gb|EFR37031.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium sp. HGF2]
          Length = 286

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 12/261 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  ++  +T   +H + ++ D  +           I R L    +  +LG+  FY  R T
Sbjct: 25  ALLYMLELTNKEAHNLYMEFDEEMQPELEELYEEGIQRLLTGIPLGHVLGFEWFYGYRFT 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV + LA        +D V  +D+GTG+GA+ ++L KE P    + 
Sbjct: 85  VNEDVLIPRPETEELVANILAAYDEHFSSQDNVMAVDIGTGSGAIAVSLKKEEPNLHMMA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +AK NA  N     F   D LQ     ++    D+++SNPPYI       +
Sbjct: 145 TDISEQAVAVAKKNADDNEAIVNFMVGDMLQPLIDRNL--KVDILISNPPYIPREE--EM 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V D++P ++L GG DGL  YR I +  ++ L +  + + E+GYNQK  +    E++K
Sbjct: 201 EHSVVDYEPHVALFGGEDGLKFYRIIFENAAKVLKERAMMAFEMGYNQKEALSE--EAKK 258

Query: 244 LF---LVNAFKDYGGNDRVLL 261
            F    +   KD  G +R+L 
Sbjct: 259 YFPNARIEVLKDMSGKNRMLF 279


>gi|154687815|ref|YP_001422976.1| YwkE [Bacillus amyloliquefaciens FZB42]
 gi|154353666|gb|ABS75745.1| YwkE [Bacillus amyloliquefaciens FZB42]
          Length = 286

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 117/266 (43%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A R+   +   L   TG+   +++      + + + +     +    +   I  I+G  
Sbjct: 17  EAGREKNAAELLLLNDTGMDRSKLLASLQEAVGEDELYRFRRHVEMHKEGIPIQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        + + + ++D+GTG+GA+ + L  E
Sbjct: 77  QFYGREFFVNDDVLIPRPETEEVVFHLLDRQKRAFSEAERLNVIDIGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
              F     DIS +AL++A+ NA   G    F  LQ D  +         D+IVSNPPYI
Sbjct: 137 CGHFSVSASDISKEALQVAERNAQNLGADVCF--LQGDLLTPFISSGKKADIIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + +   +    L   EIGYNQ   V
Sbjct: 195 SEEEMADLSDIVRFHEPLHALTDGGDGLKFYKRFMEELPLVMKDKALVVFEIGYNQGKAV 254

Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVL 260
             +F  S     V   +D  G DR +
Sbjct: 255 KDLFRHSFPNAEVEVVQDINGKDRTV 280


>gi|241761552|ref|ZP_04759639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241373860|gb|EER63393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 295

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 15/268 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           M A  D+   +    G+    +++    + ++ L          AI R  ++E +  ILG
Sbjct: 39  MTARLDAELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 92

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +RDF+ +RLT++ D   PRP++E L+++A+A+   R +      ILDLGTG+GA+ LA L
Sbjct: 93  YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 150

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            E    KG+GVD S +A++IA+ NA   G   R +   S W   ++  FD+++ NPPYI 
Sbjct: 151 DEWKDAKGLGVDASTEAIKIARLNADKCGALPRVEFKISHWGRGIQQKFDLLLCNPPYIA 210

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  +  +V  ++P ++L  G +GL  YR I   +   L + G+  +EIG++Q  +V 
Sbjct: 211 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIGFDQAENVS 268

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I +   L     F D     R +L  R
Sbjct: 269 MIAKETGLRS-RIFYDLEQRPRCVLLSR 295


>gi|34499039|ref|NP_903254.1| HemK protein [Chromobacterium violaceum ATCC 12472]
 gi|34104889|gb|AAQ61246.1| HemK protein [Chromobacterium violaceum ATCC 12472]
          Length = 254

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 9/251 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL+   ++  P+  L +           R L  E I  +LG R+FY     +S     PR
Sbjct: 9   GLTHATILGHPERELPEETASAFDALAARRLAGEPIAYLLGSREFYGRDFRVSPAVLIPR 68

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+ AL     R+++    R +DLGTG+G + + L  E+P +    VD+S +AL 
Sbjct: 69  PETEHLVEQAL----SRVDRTMPARAVDLGTGSGIIAITLALEAPDWSLGAVDVSAEALA 124

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +A+ NA   G   R D     WF  ++    F++IVSNPPYIE         ++R F+PR
Sbjct: 125 VARGNADALGA--RVDFRLGSWFGPLDADARFELIVSNPPYIERGDHHLAEGDLR-FEPR 181

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +L    DGL+  R IA G    L   G   VE GY+Q   V  +F    L  V    D 
Sbjct: 182 GALTDEADGLACLREIAAGAPGRLADGGWLMVEHGYDQGEAVRGLFADAGLLEVETIVDL 241

Query: 254 GGNDRVLLFCR 264
            G DR+ +  +
Sbjct: 242 AGQDRITIGRK 252


>gi|81428745|ref|YP_395745.1| putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78610387|emb|CAI55437.1| Putative protoporphyrinogen oxidase, HemK [Lactobacillus sakei
           subsp. sakei 23K]
          Length = 289

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 7/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      ++ Q+++     +   +       +    + +    ILG+ +FY     
Sbjct: 27  ARFLLLGRHHWTTTQLVLHYRDEMPTTEYEQYQADLAAFAEDQPAQYILGYANFYGRDFK 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PR ETE LV+  L+ +     K   +++LD+GTG+GA+ + L  E P ++   
Sbjct: 87  VTPATLIPRLETEELVEWVLSVAPV---KDRPLKVLDVGTGSGAIAITLACERPDWQVSA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
           VDIS  A+ +A+ NA T G   + D ++ D+ + V G  FDVIVSNPPYI       +  
Sbjct: 144 VDISPAAIAVAQQNAQTLGA--KVDFIEGDFLTPVMGQQFDVIVSNPPYIAEDERSVMDA 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V   +P ++L    +GL+ Y   A  V   L  DG   +E GY QK  +VRIFE +  L
Sbjct: 202 SVLKHEPDLALFAPNNGLAFYERFAQEVPAFLEPDGALFLEFGYQQKEAIVRIFEQKDPL 261

Query: 245 FLVNAFKDYGGNDRVL 260
           F +   KD     R++
Sbjct: 262 FSLEVQKDMANWSRMM 277


>gi|332885937|gb|EGK06181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dysgonomonas mossii DSM 22836]
          Length = 296

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 7/254 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +  +T  S  Q ++   + L + Q   L + + R    E I  I+G  +F+ +   +
Sbjct: 43  RIIIEHITKRSYPQAVI-SGTKLTEEQTILLHSILDRLKTFEPIQYIIGETEFFGLPFHV 101

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PRPETE LV+  L  +     K+  +++LD+GTG+GA+ +AL K          
Sbjct: 102 TKDVLIPRPETEELVELILNEN-----KKSGLKVLDIGTGSGAIAIALAKHLEKADIEAW 156

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS +AL+IA  N+ +N V+  F  +        +  FD+IVSNPPYI       +   V
Sbjct: 157 DISEEALKIATLNSDSNAVNIIFRNVDVLKNYPTDTKFDIIVSNPPYILEKEKSGMDQNV 216

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            D++P  +L     +GL  Y  IAD     L  +G    EI   +  D V++ +S+    
Sbjct: 217 LDYEPHTALFVPDNNGLLFYDRIADIALDLLEPNGKLYFEINQRKGEDTVQLVKSKGFIN 276

Query: 247 VNAFKDYGGNDRVL 260
           V  F+D   NDR++
Sbjct: 277 VCLFQDLNKNDRMV 290


>gi|116618872|ref|YP_819243.1| methylase of polypeptide chain release factor [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097719|gb|ABJ62870.1| Methylase of polypeptide chain release factor [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 330

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 6/253 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     ++   +  +    +         + +   +K++    ILG   FY     +  
Sbjct: 78  LLSGALNVNYGMLRANMSRQMPAALAALWPSWVSELVKNKPPQYILGHAPFYGREFMVDE 137

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV+  L  +      +  V +LD+GTG+GA+   L+ E+   KG   DI
Sbjct: 138 RVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIGTGSGAIIETLMLENDRVKGFAADI 194

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A+ NA    +S     ++SD FS++ G  FD+IVSNPPYI +   + +   V 
Sbjct: 195 SQDALTVAEMNAQRFNLSH-LHFVESDVFSALSGLKFDLIVSNPPYISNSDENEMDDSVL 253

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
            F+P  +L    DGL+ Y+ IA G+  HL + G    EIGY Q   V ++ ++      +
Sbjct: 254 TFEPHTALFAENDGLAIYKKIARGLDAHLTEHGRAYFEIGYKQGKAVQQLLQAALPKAKI 313

Query: 248 NAFKDYGGNDRVL 260
              +D+ G DR++
Sbjct: 314 TLRQDFSGLDRMI 326


>gi|241889800|ref|ZP_04777098.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gemella haemolysans ATCC 10379]
 gi|241863422|gb|EER67806.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gemella haemolysans ATCC 10379]
          Length = 280

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 130/262 (49%), Gaps = 10/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVR 64
           +   L  +   S  Q+  +     +         + I + +K +  +  ++G+  FY+ +
Sbjct: 24  ARFLLMYILDESP-QLFSNSLSEQISKENEEKYFSLIEKHIKEDVPLSHLVGFEYFYDRK 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++ D   PR ETE L+   + +       ++  +ILDL TG+G + + L KE      
Sbjct: 83  YKVTKDVLSPRMETEELIYKVIEYI--NTSNKNKFKILDLCTGSGIIAITLKKELEQVSV 140

Query: 125 --VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  DIS +A+E+AK N+ ++        ++SD F++++  FD+IVSNPPYI+      
Sbjct: 141 DVIASDISKEAIEVAKENSQSH--DATIKFIKSDIFNNIDDKFDIIVSNPPYIDRKDKVT 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V  +DP ++L    +G+  YR I +  + +LN++G+   EIGY+QK  ++++ +  
Sbjct: 199 MQDNVLKYDPHLALFAEEEGMYFYRKIIEQANDYLNENGVIFFEIGYDQKDKIIKLADMN 258

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
                  +KD  G DR+    R
Sbjct: 259 GYS-AEVYKDINGRDRMAFLVR 279


>gi|332637163|ref|ZP_08416026.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Weissella cibaria KACC 11862]
          Length = 287

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 5/256 (1%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L  +   +  Q+  + ++VL+D +R     A+      + +   LG   FY     + 
Sbjct: 35  YLLTGMMDWNYAQLANNLNTVLEDEKRLRFMVAVRAIKGGQPVQYALGHAAFYGREFNVD 94

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PR ETE LV+  L           V R+LD+GTG+GA+ + +  E P +   G D
Sbjct: 95  RRVLIPRQETEELVEWVLN---DHKVTGPVQRVLDIGTGSGAIAVTIGAERPTWDVTGAD 151

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           IS  AL +A++NA     +++ + ++SD FS   G +D+I+SNPPYI     D +   V 
Sbjct: 152 ISADALVVAQTNAD--QFAKQVNFIESDLFSQATGQYDIIISNPPYISEAERDVMDESVI 209

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            ++P ++L    +GL+ Y+ +A  +  +L  +G    EIGY Q   ++ +F       V 
Sbjct: 210 MYEPDLALFADDEGLALYKQMAAQLLTYLAPNGTAYFEIGYQQGPALLAVFGELPGVSVA 269

Query: 249 AFKDYGGNDRVLLFCR 264
             +D  G+DR++   R
Sbjct: 270 LRQDMSGHDRMIKVSR 285


>gi|195978152|ref|YP_002123396.1| methylase of polypeptide chain release factors [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
 gi|195974857|gb|ACG62383.1| methylase of polypeptide chain release factors [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 282

 Score =  250 bits (638), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 12/256 (4%)

Query: 11  LCRVTG----LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           L  V       +S   ++  +  +    +  L    +   +H S   I G   F ++ L 
Sbjct: 24  LAYVFKELKQWTSLDFLLHQNQEVTSEDQALLERIFLALSQHVSPQYITGRAYFRDLVLA 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + S    PRPETE LV+  L  +           +LD+GTG+GA+ +AL K  P ++   
Sbjct: 84  VDSRVLIPRPETEELVELILKEN-----DATRKSVLDIGTGSGAIAIALKKARPNWQVTA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL +A SNA+ + V   F+  +SD FS + G FD+IVSNPPYI     D +GL 
Sbjct: 139 SDISADALSLAYSNALDHHVEIAFE--ESDLFSKLSGQFDIIVSNPPYIAYEDKDEVGLN 196

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V   +P ++L    +G + YR I +  S +L   G    EIGY Q   + R+   R    
Sbjct: 197 VYQSEPHLALFAAENGFAIYRRIIEQASAYLTTSGKLYFEIGYKQGEGLKRLLSKRFPQK 256

Query: 246 LVNAFKDYGGNDRVLL 261
            +   KD  G +R+++
Sbjct: 257 RIRVLKDMLGKERMVV 272


>gi|312887827|ref|ZP_07747414.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mucilaginibacter paludis DSM 18603]
 gi|311299646|gb|EFQ76728.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mucilaginibacter paludis DSM 18603]
          Length = 290

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 9/258 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +  VTGLS  Q+     + +   Q   LT+   +      +  ILG  +FY +   ++  
Sbjct: 37  VSDVTGLSKAQLRAFTGNEITTPQAEKLTDIANQLQTGIPLQYILGHTEFYGLNFQVNPS 96

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV+  +  +  R ++     ILD+GTG+G + + L K  P  +   +DIS
Sbjct: 97  VLIPRPETEELVEWIIQAAQERHQQEA---ILDIGTGSGCIPVKLKKHLPDAEVSAIDIS 153

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI---VSNPPYIESVIVDCLGLEV 187
             AL+ AK NA  NGV      +++D  + VE  F      VSNPPY+       + + V
Sbjct: 154 PAALQTAKQNATLNGVD--VAFIEADILNPVEISFPQYSILVSNPPYVTEREKAHMHVNV 211

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +P ++L     D L  YR IAD   +HL  +GL   EI  N    ++ + + + L  
Sbjct: 212 LNNEPHLALFVSDHDPLVFYRAIADFALQHLTSNGLLFFEINENLGQQMIDLLQDKNLKN 271

Query: 247 VNAFKDYGGNDRVLLFCR 264
           +   +D  G DR++   +
Sbjct: 272 IELRQDMRGKDRMIKAQK 289


>gi|313903649|ref|ZP_07837039.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter subterraneus DSM 13965]
 gi|313466202|gb|EFR61726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermaerobacter subterraneus DSM 13965]
          Length = 331

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 10/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L     +   +++ +P++ L           ++R  + E +  IL   +F+
Sbjct: 67  EARASARVLLGAAMDMPGARLLAEPEAPLPPAAWARFVQWVLRRARREPVAYILQRAEFF 126

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++  T  PRPETE+LV++ L    P     +   + DLGTGTG V + L  E P 
Sbjct: 127 GRPFRVTPATLIPRPETEVLVEAVLRTLSP-----EPAVVADLGTGTGIVGVTLAAERPL 181

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIE 176
           +  +  D S +AL++A+ NA  +GV+ R      DW   +      G    + SNPPY+ 
Sbjct: 182 WTVLVTDCSARALKVARDNAARHGVAARMQFWAGDWAEPLLAGGWAGKLAAVASNPPYVA 241

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +  L  EV  ++P ++L  G  GL  Y  +  G  R L   G   +E+G  Q   V 
Sbjct: 242 SGDLRQLQAEVYRYEPHLALCPGPTGLEAYHRLIPGAVRLLAPGGWIFLEVGAGQAAAVR 301

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            +  +     +  + D  G  RV+
Sbjct: 302 HLLGAVGCRNLCQWPDLAGIPRVV 325


>gi|326692969|ref|ZP_08229974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc argentinum KCTC 3773]
          Length = 335

 Score =  249 bits (637), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 79/253 (31%), Positives = 121/253 (47%), Gaps = 5/253 (1%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     ++   +  +    +           + +  +++    ILG   FY     +  
Sbjct: 81  LLTGALDINYGYLRANLSRQMPAALAAVWPKWVAQLTQNKPPQYILGHAPFYGREFMVDE 140

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV+  L  +     + + V +LD+GTG+GA+   L+ E+P  KG   DI
Sbjct: 141 RVLIPRPETEQLVEWILQDA--SGTQGEPVSVLDIGTGSGAIIETLMLENPRVKGFAADI 198

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A+SNA   G+  +   ++SD F  V    FD+IVSNPPYI       +   V 
Sbjct: 199 SPDALAVAESNAQRFGLY-QLHFVESDVFQGVADLTFDIIVSNPPYIARTDEAEMDASVL 257

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
            F+P+++L    DGL+ Y  IA G+++HL   G    EIGY Q   VV + +       V
Sbjct: 258 AFEPQLALFADQDGLAIYAKIAAGLAQHLTAQGRAYFEIGYKQGPAVVAMMQQALPDATV 317

Query: 248 NAFKDYGGNDRVL 260
              KD+ G DR++
Sbjct: 318 TLKKDFAGLDRMV 330


>gi|319761652|ref|YP_004125589.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans BC]
 gi|317116213|gb|ADU98701.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans BC]
          Length = 281

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 115/261 (44%), Gaps = 12/261 (4%)

Query: 3   ALRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L    G        ++      LD            R    E +  + G ++
Sbjct: 20  ARIDAQMLLLHALGRPTGDRAWLLAHDTDPLDAPALARYQALCARRAAGEPVAYLTGSKE 79

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE+LVD AL    P        R+ DLGTG+GA+ LAL    
Sbjct: 80  FYGLPLRVDARVLDPRPDTEILVDWALELLAPL----PAPRVADLGTGSGAIALALQHAR 135

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  + + +D S  AL +A++NA   G+  RF  +Q+DW + + G FD IVSNPPYI +  
Sbjct: 136 PDARVLAMDASAGALAVARANAERLGLPVRF--VQADWLAGIAGPFDAIVSNPPYIPAQD 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                      +P  +L  G DGL   R IA      L   G   +E G++Q   V  + 
Sbjct: 194 PHL---AALAHEPLSALASGADGLDDIRAIAAQAPALLAPGGWLLLEHGWDQAGAVQALL 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +  L  V +  D  G  R  
Sbjct: 251 RASGLARVQSRDDLAGIARCT 271


>gi|160916054|ref|ZP_02078261.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991]
 gi|158431778|gb|EDP10067.1| hypothetical protein EUBDOL_02081 [Eubacterium dolichum DSM 3991]
          Length = 284

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 12/262 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  +L  +T   +H + ++ D  +   Q       + R ++ E +  +LG+  FY  R  
Sbjct: 25  AFLYLLELTNKEAHNLYMEYDEEMPQAQIDEFEAGVERLVEGEPLGHVLGFEWFYGYRFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV   LA      +    V  +D+GTG+GA+ +AL KE P    + 
Sbjct: 85  VNEDVLIPRPETEELVAYILAAYDEYFKDTLNVTAVDVGTGSGAIAVALKKEEPNIHILA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS KA  IAK NA  N V    + L  D    +       D+++SNPPYI S     +
Sbjct: 145 SDISEKACRIAKQNAQDNDVV--VEVLCGDMLEPLIERNIKVDILISNPPYIPSDE--AM 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V +++P ++L GG DGL  YR I +   + L    + + E+GYNQK  +    E+RK
Sbjct: 201 EDSVVNYEPHVALFGGEDGLKFYRIIFEHAKKVLKDKAMMAFEMGYNQKEALSA--EARK 258

Query: 244 LF---LVNAFKDYGGNDRVLLF 262
            F    +   KD  G +R+L  
Sbjct: 259 YFPDAKIEVIKDMSGKNRMLFI 280


>gi|269121055|ref|YP_003309232.1| modification methylase, HemK family [Sebaldella termitidis ATCC
           33386]
 gi|268614933|gb|ACZ09301.1| modification methylase, HemK family [Sebaldella termitidis ATCC
           33386]
          Length = 361

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 7/259 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
           +A          V  +    +        ++ ++  + N +    K +  +  +L   +F
Sbjct: 98  EARLTVELIFSHVLSIDRMMLFTKYTMQPEEEKKNKIRNLLKLRAKDKIPLQYLLNEEEF 157

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++     PR ETE++V+ AL      ++      ILD+G G+G + + + KE P
Sbjct: 158 YGRPFYINKGVLIPRNETEIVVERAL----QELKDTAAPNILDIGAGSGVISITIAKEKP 213

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             K +G+DIS  ALEIA  N      ++    L+S+ F  V    FD+I+SNPPYI    
Sbjct: 214 DSKILGIDISDNALEIANKN-KGLLKADNVKFLKSNLFQEVNYHSFDMIISNPPYIPKSE 272

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  +VR  +P  +L    +GL  Y  I+   S +L   G    E GYNQ   +  I 
Sbjct: 273 YETLSDDVRMHEPEEALTAENEGLFFYYEISKNASDYLKNGGRLIFECGYNQAEIIESIM 332

Query: 240 ESRKLFLVNAFKDYGGNDR 258
           +      +  FKD  G +R
Sbjct: 333 KETGYKNIEIFKDLNGINR 351



 Score = 37.0 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 6/42 (14%), Positives = 14/42 (33%)

Query: 2  QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV 43
              ++   L +V  L    +    D +L D +   +   + 
Sbjct: 22 NPRIETELILSQVLNLDRIMLYAYFDRILTDDEMSEIRTLLK 63


>gi|330823523|ref|YP_004386826.1| protein-(glutamine-N5) methyltransferase [Alicycliphilus
           denitrificans K601]
 gi|329308895|gb|AEB83310.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicycliphilus denitrificans K601]
          Length = 281

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 115/261 (44%), Gaps = 12/261 (4%)

Query: 3   ALRDSHSFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L    G        ++      LD            R    E +  + G ++
Sbjct: 20  ARIDAQMLLLHALGRPTGDRAWLLAHDTDPLDAPALARYQALCARRAAGEPVAYLTGSKE 79

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE+LVD AL    P        R+ DLGTG+GA+ LAL    
Sbjct: 80  FYGLPLRVDARVLDPRPDTEILVDWALELLAPL----PAPRVADLGTGSGAIALALQHAR 135

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  + + VD S  AL +A++NA   G+  RF  +Q+DW + + G FD IVSNPPYI +  
Sbjct: 136 PDARVLAVDASAGALAVARANAERLGLPVRF--VQADWLAGIAGPFDAIVSNPPYIPAQD 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                      +P  +L  G DGL   R IA      L   G   +E G++Q   V  + 
Sbjct: 194 PHL---AALAHEPLSALASGADGLDDIRAIAAQAPALLAPGGWLLLEHGWDQAGAVQALL 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +  L  V +  D  G  R  
Sbjct: 251 RAAGLARVQSRDDLAGIARCT 271


>gi|298369665|ref|ZP_06980982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282222|gb|EFI23710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 274

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 13/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L R  G +  Q++    S + +           R ++ E +  ILG R+FY 
Sbjct: 14  PRNEARMLLQRALGCTRVQLLTQGGSEMSEHAAATAQELAHRRIQGEPMAYILGEREFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRPETE LV++ L    P+       R+ DLGTG+GAV +++  E P  
Sbjct: 74  RMFRVNPDVLIPRPETEHLVEAVLDRLPPQ------GRVWDLGTGSGAVAVSIALERPDA 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178
           +    DIS  AL  A        +    +     WF     S +  +D+IVSNPPYIE+ 
Sbjct: 128 RVRASDISAAALHTAAQ--NAAALGADIEFALGSWFDTDRPSEKKSYDIIVSNPPYIEAG 185

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P+ +L    DGLS  R +A G   +L   G   +E G  Q   V  +
Sbjct: 186 DAHLEQGDLR-FEPQGALTDFSDGLSCIRALAAGSPAYLKNGGWLLLEHGCGQGAQVRAV 244

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
                   ++   D  G DRV L 
Sbjct: 245 LAEHGFSRIDTLPDLAGLDRVTLG 268


>gi|149183884|ref|ZP_01862275.1| modification methylase, HemK family protein [Bacillus sp. SG-1]
 gi|148848403|gb|EDL62662.1| modification methylase, HemK family protein [Bacillus sp. SG-1]
          Length = 289

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 6/261 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +  +  +   Q++ +   VL+D+ +      I   ++   I  I+G+ +FY  + ++
Sbjct: 29  ELLMKHLLEMDRSQLLANQRLVLEDKVKLEFARGITAHIQGTPIQHIIGFEEFYGRKFSV 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LV   L            +R  D+GTG+GA+ + +  E P    + V
Sbjct: 89  NEHVLIPRPETEELVYYTLEKIRKHFSADGELRFADIGTGSGAIAVTMKLEKPELFVMAV 148

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DIS  AL +A+ NA   GVS   + L+ D    +   +   DV+VSNPPYI    +D L 
Sbjct: 149 DISANALHVARKNADNLGVS--VEFLEGDLLEPLISRDEKLDVLVSNPPYIPLGELDSLS 206

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V+D +P  +L GG  GL  Y+   + +   +    L   EIG  Q   V  +      
Sbjct: 207 EVVKDHEPHSALFGGESGLEFYQRFMEELPLVMKDRCLIGFEIGAGQGEAVAGMLRGAFP 266

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                   D  G DR++   R
Sbjct: 267 EAHTEIIHDINGKDRMVFCTR 287


>gi|256421259|ref|YP_003121912.1| modification methylase, HemK family [Chitinophaga pinensis DSM
           2588]
 gi|256036167|gb|ACU59711.1| modification methylase, HemK family [Chitinophaga pinensis DSM
           2588]
          Length = 286

 Score =  249 bits (637), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 5/262 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +H  +  VTG+S    IV  +  L   Q   LT A+   L HE +  ++G   FY
Sbjct: 22  EAANIAHIVMEYVTGMSKMDRIVYKERELTTEQTSQLTAAVKALLAHEPVQYVIGSSWFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETE LV+  +     R  +    +ILD+GTG+GA+ LA+ KE P 
Sbjct: 82  GMELLVNPHVLIPRPETEELVEWIVQDI--RTAQLSQPQILDIGTGSGAIPLAIKKELPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
                VD+S  AL+ AK NAV   +   F+ +     ++     +FD+IVSNPPYI    
Sbjct: 140 AHVQAVDVSKGALQTAKDNAVKQQLDVTFELVDILNKTAWTHLPMFDIIVSNPPYICQRE 199

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +  +V  ++P ++L     D L  YR I       L   G    EI      +   +
Sbjct: 200 SADMQEQVVSYEPSLALFVPDDDALLFYREIGWMGKEKLKNGGALYFEINEAFGTETAAL 259

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
            E      V   KD  G DR++
Sbjct: 260 LEGMGYLEVEIKKDLFGKDRMV 281


>gi|315651890|ref|ZP_07904893.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM
           3986]
 gi|315485892|gb|EFU76271.1| protein-(glutamine-N5) methyltransferase [Eubacterium saburreum DSM
           3986]
          Length = 281

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 142/264 (53%), Gaps = 12/264 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQR-FFLTNAIVRSLKHESIHRILGWRDF 60
            A  D    +  V      +  +     + DR++   L + + + L++  I  IL    F
Sbjct: 21  DAGSDILLLIYEVFDFDFSKWTMFKYDEIKDREKLDILESYVSKRLENMPIQYILNKAYF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR +TE+LV+  L  +    +     +ILD+ TG+GA+ ++L K   
Sbjct: 81  CGFPFFVDKSVLIPRFDTEVLVEEILRIA----KGDKNKKILDMCTGSGAIAISLKKLGG 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
           F +   VDIS  ALEIAK NAV  G    F   +SD FS +  E  +D+IVSNPPYI+S 
Sbjct: 137 FERVDAVDISNDALEIAKKNAVGLGCDINFS--KSDMFSGLTSENKYDIIVSNPPYIKSH 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +VD L  EV+DF+PR++LDG IDG+  Y+ I +   ++LN +G+ ++EIGY++  D+ ++
Sbjct: 195 MVDSLESEVKDFEPRLALDGDIDGMKFYKIIKENFIKYLNPEGILALEIGYDEAKDIRKL 254

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
           F+    F +N  KD    DRV + 
Sbjct: 255 FDG---FDINIKKDLSNLDRVAII 275


>gi|94264415|ref|ZP_01288205.1| Modification methylase HemK [delta proteobacterium MLMS-1]
 gi|93455172|gb|EAT05390.1| Modification methylase HemK [delta proteobacterium MLMS-1]
          Length = 319

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 2   QALRDSHSFLCRVT---------GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH 52
           +A +++   L  V                +++  D  L   Q   L  A  R  + E + 
Sbjct: 37  EAGQEAELLLSWVLAAGQKGHQAWDERAGLVLAADRPLSSAQIEKLRQAAARRSRREPLA 96

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAV 111
            I+G  +F+++   +      PRPETELLV+ AL  +   R      + ILDLGTG+G +
Sbjct: 97  YIIGEWEFWSLPFAVDPGVLIPRPETELLVEEALRLAPQLRGGAGRPLTILDLGTGSGIL 156

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVI 168
            + L +E    + + VD S  AL +A+ N   + V  R   L +DW S++   + LFD++
Sbjct: 157 AVVLARELAPARVIAVDRSPAALAVARRNVCRHRVESRVSLLAADWLSALAAGKALFDLV 216

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPPY+E V +  L  EVRD++PR +LDGG  G++  R +A  +   L   G   +EIG
Sbjct: 217 VANPPYVEDVALPGLEPEVRDYEPRQALDGGAAGMAQIRRLAAELPPFLRPGGGLLMEIG 276

Query: 229 YNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFCR 264
           ++Q+  V ++         V    D  G  R LL CR
Sbjct: 277 WDQQGVVEQLLAPDNAWREVRILPDLAGLPR-LLCCR 312


>gi|257877102|ref|ZP_05656755.1| modification methylase HemK [Enterococcus casseliflavus EC20]
 gi|257811268|gb|EEV40088.1| modification methylase HemK [Enterococcus casseliflavus EC20]
          Length = 285

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                +         ++  D  +       +   + + L+HE    +LG+ +FY  RL +
Sbjct: 27  QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV++ L     ++     +R++D+GTGTGA+ +AL    P +    V
Sbjct: 87  TPATLIPRPETEELVENCLT----KLPADQPLRVVDIGTGTGAIAIALKLARPQWAVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL +AK NA   G   RF   Q D    V +  +D+IVSNPPYI +     + + 
Sbjct: 143 DLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR+ +P+++L     GL+ Y+ +A      L  +G  ++EIG+ Q + V ++F +     
Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMALEIGFQQGLAVQQLFAAAFPNK 260

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD  G DR++ 
Sbjct: 261 EVTVVKDLAGQDRMVF 276


>gi|255009911|ref|ZP_05282037.1| putative protoporphyrinogen oxidase [Bacteroides fragilis 3_1_12]
 gi|313147699|ref|ZP_07809892.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136466|gb|EFR53826.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 278

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 119/261 (45%), Gaps = 12/261 (4%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
               C + G  +    +  D +L   ++  L + + R  K+E I  I G  +FY     +
Sbjct: 26  KMICCDLLGQDAIDYYLGKDIILSANEQRDLESIVERLKKNEPIQYIQGRANFYGSMFRV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LVD  +       E    VR+LD+GTG+G + ++L K  P  +    
Sbjct: 86  APGVLIPRPETEELVDLIVK------ESATGVRLLDIGTGSGCIAISLSKHIPGAEVTAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLG 184
           D+S  AL IA+ N         F+  + D FS   S +  +D+IVSNPPY+     + + 
Sbjct: 140 DVSEDALAIARQNNQELKTKVNFE--KVDVFSTEFSGDRRYDIIVSNPPYVTESEKNEME 197

Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             V D++P ++L     D L  YR IA      L+  G    EI      +++++   + 
Sbjct: 198 PNVLDWEPGLALFVPDNDPLLFYRRIASLGREMLSLHGKLYFEINRAYGEEILQMLGGKG 257

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   KD  GNDR++   R
Sbjct: 258 YRDLRLIKDISGNDRIVTAKR 278


>gi|313889399|ref|ZP_07823047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122231|gb|EFR45322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus pseudoporcinus SPIN 20026]
          Length = 276

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/254 (33%), Positives = 130/254 (51%), Gaps = 14/254 (5%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
            V   S    ++  +  +    +  L +   +  +  S   I G   F  + LT++    
Sbjct: 30  EVKEWSLLDFLLHQNKQITAEDQVLLKSIFEQLYRGRSPQYITGKAYFRELILTVNESVL 89

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV+  LA +     KR  +++LD+GTG+GA+ ++L KE P +K    DIS +
Sbjct: 90  IPRPETEELVELILAEN-----KRHDLQLLDIGTGSGAIAISLKKERPSWKVTASDISLE 144

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           ALE+A+ NA+ NG    F   QSD FSS+ G FD+IVSNPPYI     + +G  V   +P
Sbjct: 145 ALEVAQINALKNGTDIMFS--QSDLFSSLSGKFDIIVSNPPYIAFADKEEVGRNVLASEP 202

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD----VVRIFESRKLFLVN 248
            ++L    +GL+ YR+I +   ++L+  G    EIGY Q       V   F  ++     
Sbjct: 203 HLALFAEEEGLAIYRSILEQAEQYLSPQGKLYFEIGYKQGQALFDLVKTNFPEKRF---R 259

Query: 249 AFKDYGGNDRVLLF 262
             +D  G DR+++ 
Sbjct: 260 LKQDCYGKDRMVII 273


>gi|72162817|ref|YP_290474.1| modification methylase HemK [Thermobifida fusca YX]
 gi|71916549|gb|AAZ56451.1| modification methylase HemK [Thermobifida fusca YX]
          Length = 285

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 10/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++    DS  D R        + R    E +  I G   F  
Sbjct: 23  PRADAEELAAFVHGVRRGELHTVADSDFDAR----YWECVARRAAREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++V  A+           +  ++DLGTG+GA+ +++ +E P  
Sbjct: 79  LELEVGPGVFIPRPETEMMVSWAIDTLRAMDVADPL--VVDLGTGSGAIAISIAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVI 179
           +   V++   AL  AK N   +G+ ER     +D         G  D++++NPPY+    
Sbjct: 137 RVHAVEVDATALSWAKRNIARSGLGERITAHHADMRTCLPEYHGRVDLVITNPPYVPLDS 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  EVRD+DP I+L  G DGL   R +     R L   G  ++E G  Q +D+  +F
Sbjct: 197 ADEIPPEVRDYDPAIALWAGPDGLDMIRQLEAVGRRLLRPGGYIAIEHGDGQGIDIPPLF 256

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E      V   KD    DR ++  R
Sbjct: 257 PEELGWCEVRNRKDLAHRDRFVVARR 282


>gi|293553328|ref|ZP_06673964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1039]
 gi|291602552|gb|EFF32768.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecium E1039]
          Length = 279

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PDVPLEVIDIGTGTGAIAISLKAARRNWHVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+I+L    DGL+ Y  IA      L  +G   +EIG+ Q   V +IF+      
Sbjct: 201 VRSFEPKIALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKIFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|260753917|ref|YP_003226810.1| modification methylase, HemK family [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553280|gb|ACV76226.1| modification methylase, HemK family [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 286

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 15/268 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           M A  D+   +    G+    +++    + ++ L          AI R  ++E +  ILG
Sbjct: 30  MTARLDAELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 83

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +RDF+ +RLT++ D   PRP++E L+++A+A+   R +      ILDLGTG+GA+ LA L
Sbjct: 84  YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            E    KG+GVD S +A++IA+ NA   G   R +     W   ++  FD+++ NPPYI 
Sbjct: 142 DEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIA 201

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  +  +V  ++P ++L  G +GL  YR I   +   L + G+  +EIG++Q  +V 
Sbjct: 202 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPEIPSLLTERGIACLEIGFDQAENVS 259

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I +   L     F D     R +L  R
Sbjct: 260 MIAKETGLRS-RIFYDLEQRPRCVLLSR 286


>gi|21910336|ref|NP_664604.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS315]
 gi|28895911|ref|NP_802261.1| protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1]
 gi|21904532|gb|AAM79407.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes
           MGAS315]
 gi|28811161|dbj|BAC64094.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes SSI-1]
          Length = 279

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE   ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERSNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS + G FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISGTFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      +    D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLAKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRVVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|163788596|ref|ZP_02183041.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium
           ALC-1]
 gi|159875833|gb|EDP69892.1| putative protoporphyrinogen oxidase [Flavobacteriales bacterium
           ALC-1]
          Length = 492

 Score =  249 bits (636), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 16/274 (5%)

Query: 6   DSHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           DS  FLC      L   Q+ ++P+  L+  +       +    + + I  ILG  +FY +
Sbjct: 24  DSFFFLCTEHYLNLPRFQLSLEPEFTLNKSETGIFFKVLEDLNQQKPIQYILGETEFYGL 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++ +   PRPETE LVD  + +   + E+   +RILD+GTG+G + ++L K  P  +
Sbjct: 84  PFKVNENVLIPRPETEELVDLIIKYHSEQSEESQ-LRILDIGTGSGCIAISLAKNLPSAE 142

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF------------DTLQSDWFSSVEGLFDVIVSN 171
              +D+S  AL+IAK NA  N VS  F               +         +FD+IVSN
Sbjct: 143 VYALDVSEDALKIAKQNADLNNVSINFIETDILKISNDSFFWKDITLQQKRLVFDIIVSN 202

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PPY+ ++    +   V D +P ++L    D  L  Y+ I +    +L   G    EI   
Sbjct: 203 PPYVRNLEKQEIKPNVLDNEPHLALFVEDDNPLLFYKEITNFAIDNLKPKGELYFEINQY 262

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +   +  +     +   KD  GNDR+L   +
Sbjct: 263 LGHETKALLVNANFENMELLKDLNGNDRMLKGRK 296


>gi|86156793|ref|YP_463578.1| HemK family modification methylase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773304|gb|ABC80141.1| [protein release factor]-glutamine N5-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 286

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 11/259 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L         ++ +D D  L   +       + R  + E    + G RDFY     
Sbjct: 32  AELLLAHALRCERMRLYLDFDKPLGAPELAAFRELVRRRGEGEPTAYLTGRRDFYGRPFR 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +    PRPETEL++++A      R    +    LDL TG+GA+ ++L  E    + V 
Sbjct: 92  VDARVLVPRPETELVLEAA------RDALPEGGAALDLCTGSGALGVSLALERAGARVVA 145

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
            D+S  AL +A+ NA   G +   D  Q D ++++     FDVIVSNPPY+    +D L 
Sbjct: 146 TDLSADALVVAEENARALGAA--VDLRQGDLWAALREGERFDVIVSNPPYVPRGELDTLP 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +PR++LDGG DGL   R I +G    L   G   +E+       + R+      
Sbjct: 204 REVRR-EPRLALDGGPDGLDLLRRIVEGAPARLVPGGTLVLEMHERHLDVLPRLCREAGF 262

Query: 245 FLVNAFKDYGGNDRVLLFC 263
               A  D  G  R+ +  
Sbjct: 263 ERAEARPDLAGLPRLTVAR 281


>gi|162147701|ref|YP_001602162.1| HemK protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542325|ref|YP_002274554.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786278|emb|CAP55860.1| putative hemK homolog protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209530002|gb|ACI49939.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 293

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 127/261 (48%), Gaps = 5/261 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   +  V       ++    S +D  +       + R   HE +  I G   F++
Sbjct: 34  PRREARLLMAHVLRTDLAGLLAR--SAMDAAEHRSFVALVARRAAHEPMAYITGRAGFWS 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L  +  T  PR ++E LV++ LA    R ++  V  ILDLGTGTG + LA L E P  
Sbjct: 92  LDLETAPATLIPRADSETLVEALLA---QRPDRGAVRTILDLGTGTGCLLLAALSEYPDA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+GVDI   A  +A  NA   G+ +R   L +DW +++ G FDV+ SNPPYI    +  
Sbjct: 149 WGLGVDIDPDAAHLAARNARRTGLRDRCAMLAADWSTAIAGRFDVVFSNPPYIPRADLAG 208

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VRD +P  +LDGG DGL  YR +   +   L   G+   EIG  Q+  +  +    
Sbjct: 209 LMPDVRDHEPARALDGGTDGLDAYRLLTGALPSLLAHGGIAIFEIGIGQERSMPDLARQA 268

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L +V    D GG  R +L  
Sbjct: 269 GLDIVGIRTDLGGIPRAVLMQ 289


>gi|15675119|ref|NP_269293.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS]
 gi|71910677|ref|YP_282227.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS5005]
 gi|13622278|gb|AAK34014.1| putative protoporphyrinogen oxidase [Streptococcus pyogenes M1 GAS]
 gi|71853459|gb|AAZ51482.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus pyogenes MGAS5005]
          Length = 279

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS  +++  +  +       L +      +H S   I G   F +++L +      PRP
Sbjct: 34  WSSLDMLIHQNQAVTPEDAVLLEHIFCSLSQHLSPQYITGNAYFRDLKLAVDKRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +L        + +LD+GTG+GA+ ++L KE P ++    DIS  AL++
Sbjct: 94  ETEELVDMILAENLDA-----PLNVLDIGTGSGAIAISLKKERPNWQVTASDISRAALDL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK+NA    +      ++SD FS +   FD+IVSNPPYI     + + L V   +P ++L
Sbjct: 149 AKANADAYQLD--ITFIESDVFSLISETFDIIVSNPPYISYEDKEEVSLNVLQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               +G + YR I +    +L K+G    EIGY Q   +  + ++      + A  D  G
Sbjct: 207 FAKENGYAIYRKIIEQADNYLTKEGKLYFEIGYKQAEGIKDMLQAYFPQRHIRAVTDIFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|188996114|ref|YP_001930365.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931181|gb|ACD65811.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 291

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 11/269 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   + ++  L  H +I  PD  + +     L     +      +  +   ++F+
Sbjct: 21  NPANEALILISKILNLPKHHIISYPDLEISEEDAKKLVVLSEKRASGYPMAYLTKNKEFF 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESP 120
            +   +      PRPETE+LV+  +     +++      I L++G G+G + ++LLK   
Sbjct: 81  GLDFYIEEGVLIPRPETEILVEKVIE----KLQNAKGELIGLEVGVGSGCISVSLLKNIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYI 175
             K +G+DIS KALEI + +A  + V +R     F+ +     S      D +VSNPPYI
Sbjct: 137 NLKIIGIDISEKALEITEKSAKIHEVLDRLKLFKFNIMNGKMNSLNLPKLDFVVSNPPYI 196

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +      L  EV+  +P+ +L  G +G   Y  I + +   L +DG  + E+G  Q   V
Sbjct: 197 KEEDYQKLQKEVKK-EPKEALISGKEGTEFYEKIVNSLKDFLKEDGFFAFEVGIGQAEKV 255

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             I E      +  +KD  G DRV++  +
Sbjct: 256 KLILEDNGYKNIEIYKDLAGIDRVIIASK 284


>gi|159044281|ref|YP_001533075.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
 gi|157912041|gb|ABV93474.1| putative protein methyltransferase [Dinoroseobacter shibae DFL 12]
          Length = 274

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 82/232 (35%), Positives = 128/232 (55%), Gaps = 8/232 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +D   + L +A+      + + +I+G R F+     ++ D  +PRP+TE LV+ ALA   
Sbjct: 48  NDWTLYTLEDAVKARAARQPVSQIIGRRAFFKHDFEVTPDVLDPRPDTETLVEVALAH-- 105

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     +LD+G+G+G + L+LL E P   G+G+DIS  AL++A+ NA   G++ R 
Sbjct: 106 ------PFDTVLDIGSGSGCILLSLLAERPEATGLGIDISAPALDVARRNADRLGLAGRA 159

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              +SDW + V+  FD+IVSNPPYI++     L  E+RD++PR +L+ G DGL  YR IA
Sbjct: 160 RFRRSDWLAEVDEQFDLIVSNPPYIDAATYATLAPELRDWEPRGALEAGADGLDAYRVIA 219

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
               R L   G   +EIG++Q   V  +  +     +   +D  G DRV+  
Sbjct: 220 RDAPRVLAPGGTLCLEIGHDQGRSVPALLAASGWRQITVQRDLIGKDRVVTA 271


>gi|296111566|ref|YP_003621948.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU
           11154]
 gi|295833098|gb|ADG40979.1| protoporphyrinogen oxidase (putative) [Leuconostoc kimchii IMSNU
           11154]
          Length = 331

 Score =  249 bits (636), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 9/261 (3%)

Query: 6   DSH----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           D+       L     ++   +  +    +           I + L ++ +  ILG   FY
Sbjct: 70  DAQDNVDFLLSGALNINYAYLRANITRTMPADLATVWPKWIAKLLANQPVQYILGHAPFY 129

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE LV+  L     +I +   + +LD+GTG+GA+   L+ E+  
Sbjct: 130 GREFIVDERVLIPRPETEQLVEWILKDVSSQIAQ--PISVLDIGTGSGAIIETLMLENSD 187

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +G   DIS  AL +A+ NA   G+      ++SD +S+V G  FDVIVSNPPYI S   
Sbjct: 188 IRGFAADISSDALAVAELNAQRLGL-HYLHVIESDVYSAVAGLKFDVIVSNPPYIASTDE 246

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D + + V +F+PR +L    DGL+ Y  +A+ +  HL + G    EIGY Q   VV I +
Sbjct: 247 DEMDISVLNFEPRTALFAEHDGLAIYELLAEKLDAHLTEHGRAYFEIGYKQGQQVVDIMQ 306

Query: 241 SR-KLFLVNAFKDYGGNDRVL 260
                  +   +D+ G DR++
Sbjct: 307 QALPQAKITLRQDFAGLDRMI 327


>gi|147669661|ref|YP_001214479.1| HemK family modification methylase [Dehalococcoides sp. BAV1]
 gi|146270609|gb|ABQ17601.1| modification methylase, HemK family [Dehalococcoides sp. BAV1]
          Length = 277

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 10/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       + R L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQRRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+      
Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L       +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + +  + 
Sbjct: 197 LLNG-----EPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263
                 +    DY G  R++   
Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274


>gi|257092417|ref|YP_003166058.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257044941|gb|ACV34129.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 274

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 11/260 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   +  V   +  ++I +P   L   Q   L + + R    E +  +LG   FY +
Sbjct: 16  RLDARLLVEHVAACTHAELISEPMRRLLAEQAQVLADLVERRAAGEPLAYLLGSAGFYGI 75

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETELLV  A+      +E     RI+DLGTG+G V + +    P  +
Sbjct: 76  EFQITPAVLIPRPETELLVTLAVKC----VESLAEPRIVDLGTGSGVVAVTVGCLCPAAR 131

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
              VD+S  AL++A+ NA  +GV      L  DW++ + +  FD+IV+NPPY+ +     
Sbjct: 132 ITAVDLSPSALDLARINAGRHGVEA--TFLVGDWYTPLGDCGFDLIVANPPYVANDDEH- 188

Query: 183 LGLEVRDFDPRISLDGGI---DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           L  +   F+PR++L  G+   DGL+  R I DG  RHL   G   +E GY+Q   V    
Sbjct: 189 LQRDGLPFEPRMALTDGVPGGDGLACIRRITDGARRHLLPGGWLLIEHGYDQAAAVRNEL 248

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
               L  V +++D    +RV
Sbjct: 249 HKAGLSDVASWQDLARIERV 268


>gi|325141378|gb|EGC63860.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Neisseria meningitidis 961-5945]
          Length = 245

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 81/242 (33%), Positives = 115/242 (47%), Gaps = 12/242 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY 
Sbjct: 13  PKNEARMLLQYVSEYTRVQLLTRGGEEMPDEVRQRADRLAQRRLNGEPVAYILGVREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T++     PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P  
Sbjct: 73  RRFTVNPSVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
                DIS  ALE A+ NA   G   R +     WF      EG +D+IVSNPPYIE+  
Sbjct: 127 FVRASDISPPALETARKNAADLGA--RVEFAHGSWFDTDMPSEGKWDIIVSNPPYIENGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P+I+L    DGLS  RT+A G    L + G   +E G++Q   V  + 
Sbjct: 185 KHLSQGDLR-FEPQIALTDFSDGLSCIRTLAQGAPDRLAEGGFLLLEHGFDQGAAVRGVL 243

Query: 240 ES 241
             
Sbjct: 244 AE 245


>gi|209883258|ref|YP_002287115.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209871454|gb|ACI91250.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 290

 Score =  248 bits (635), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 100/263 (38%), Positives = 139/263 (52%), Gaps = 1/263 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V  L    +I      LD  +   L + I R +  E + RILG R+F+ 
Sbjct: 27  PELDARLLLGDVLQLDLTGLITAATRRLDTSEAQRLEDVIRRRIAGEPVARILGRREFWG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   LS  T  PRP+TE L+++ L            +RILD+GTG+GA+ LALL E P  
Sbjct: 87  LTFALSPATLVPRPDTETLIEAVLDILKREGRTAAPLRILDIGTGSGAILLALLSELPNT 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G DI+  A+  A  NA T G++ R   +  D+  ++ G FD++VSNPPYI +  +D 
Sbjct: 147 TGIGTDINPAAIATAADNAATLGLASRATFVACDYAGALRGPFDIVVSNPPYIPTADIDH 206

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L LEVR  DPR++LDGG DGL+ YRTIA      L   G+ +VEIG  Q   V  +    
Sbjct: 207 LDLEVRAHDPRLALDGGADGLTAYRTIAPLAFALLAPSGIAAVEIGQRQAHGVATLMAEA 266

Query: 243 KLFLVNAFK-DYGGNDRVLLFCR 264
            L +    K D GG  RV+   +
Sbjct: 267 GLAVPAPAKADLGGVPRVVTARK 289


>gi|332687008|ref|YP_004456782.1| methylase of polypeptide chain release factors [Melissococcus
           plutonius ATCC 35311]
 gi|332371017|dbj|BAK21973.1| methylase of polypeptide chain release factors [Melissococcus
           plutonius ATCC 35311]
          Length = 279

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 115/252 (45%), Gaps = 11/252 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
                  +      +   ++  L   + + L       +LG  +FY +   ++  T  PR
Sbjct: 35  NWEKIDWLQHMKETMSKEEKKQLETDLSKLLNDYPPQYLLGETEFYGLPFLVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LVD  L  +           I+D+GTGTGA+ ++L    P ++  G+DIS +AL 
Sbjct: 95  PETEELVDYCLKENEAAYS-----TIVDVGTGTGAIAISLKHARPQWQVTGIDISKQALI 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A+ NA     +   D L  D    +       D+I+SNPPYI     + +   V  ++P
Sbjct: 150 VAQENAKILNTT--IDFLSGDLLEPLMMNGQKVDMIISNPPYISKAEKNWMDRSVIKYEP 207

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFK 251
            ++L    +GL+ Y+ +A+   + L +DG   +EIG+ Q   V  IF+       +   K
Sbjct: 208 ALALFADQNGLAIYQRLAEEAKKVLKEDGKIYLEIGFQQGKAVQEIFQQAFPTKQIIIKK 267

Query: 252 DYGGNDRVLLFC 263
           D   NDR++   
Sbjct: 268 DLAKNDRIVAIT 279


>gi|229542477|ref|ZP_04431537.1| modification methylase, HemK family [Bacillus coagulans 36D1]
 gi|229326897|gb|EEN92572.1| modification methylase, HemK family [Bacillus coagulans 36D1]
          Length = 287

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 8/263 (3%)

Query: 5   RDS---HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           RD+      L     +   +++ +   VL          A     K   +  I G+  FY
Sbjct: 23  RDAQAGEILLGHFLDMDRTRLLSNLRMVLPPDVEAKFRQAAEAHAKGVPVQHITGYETFY 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  ++ D   PRPETE LV  A+        +   +++ D+GTG+G +   +  E P 
Sbjct: 83  GRKFFVNGDVLIPRPETEELVQGAIGRIRRHFGETKGLKLADIGTGSGIIATTIKLELPE 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                 DIS KAL +A+ NA       RF  +  D           D+++SNPPYI    
Sbjct: 143 LLVYASDISEKALAVAEKNAEALHADIRF--VHGDLLQPFIHGEKLDIVLSNPPYIPETD 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L + VRD DP  +L GG DGL+ YR   + +   L+K  L   EIG  Q   V  + 
Sbjct: 201 RSSLSVVVRDHDPETALFGGEDGLAFYRRFMETLPSVLSKRALVGFEIGSGQGERVSCLL 260

Query: 240 ESR-KLFLVNAFKDYGGNDRVLL 261
                  +V   +D  G++R++ 
Sbjct: 261 RDTFPESVVEVVRDINGHERMVF 283


>gi|303247809|ref|ZP_07334078.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio fructosovorans JJ]
 gi|302490893|gb|EFL50792.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio fructosovorans JJ]
          Length = 326

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GL    +I+  D  L + +       + R  + E +  +LG R+FY +   
Sbjct: 69  AQLLLAHALGLDRLGLILAMDRPLIEAELDAYRPLVARRGQGEPVAYLLGEREFYGLSFA 128

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S DT  PRPETE +V+ AL              + DLGTG+G + + L  + P   GV 
Sbjct: 129 VSPDTLIPRPETEGIVEHALEL----FPGDGPGSLADLGTGSGCLAVTLAVKWPLATGVA 184

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +D S  AL +A+ NA  +GV  R D +++D+ +    +G + ++VSNPPY+ +       
Sbjct: 185 LDRSAGALTVARGNAARHGVDGRLDFVEADFAALPVRQGGYGLVVSNPPYVSAAEYRACS 244

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRDF+P+ +L  G  GL     +A      L   G   VEIG+ Q      +      
Sbjct: 245 FEVRDFEPQGALVPGESGLEAVPVVARTAFDRLAPGGWLLVEIGWEQGPAAAAVLAEAGF 304

Query: 245 FLVNAFKDYGGNDRVL 260
             V   +D  G+DRV+
Sbjct: 305 ADVAVRRDLAGHDRVV 320


>gi|319900206|ref|YP_004159934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides helcogenes P 36-108]
 gi|319415237|gb|ADV42348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides helcogenes P 36-108]
          Length = 312

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 8/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S+    +  D +L  +++  L   + R    E I  + G   F 
Sbjct: 54  EAACLSRIICCEMLGQSTVDYYLGKDMILSLKEKQELDGILSRLRDFEPIQYVQGTTSFL 113

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 114 GRTFRVAPGVLIPRPETEELVEIMLK------EIPADARILDIGTGSGCIAVSLSKGLPC 167

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIV 180
            + V  DIS +AL  A  N      S +F            E  +DVIVSNPPY+     
Sbjct: 168 AQVVAWDISEEALATAHRNNDALQASVQFALCDVLTCCPDQEDRYDVIVSNPPYVLEKEK 227

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V D++P ++L     D L  YR IA+   + L   G    EI        V + 
Sbjct: 228 LQMERNVLDWEPSLALFVPDTDPLLFYRRIAELGQKLLVAGGKLYFEINRAFGEATVAML 287

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
             +     +  KD  GNDR ++  R
Sbjct: 288 GGQGYANAHILKDISGNDRFVIAER 312


>gi|227823187|ref|YP_002827159.1| putative modification methylase, HemK family [Sinorhizobium fredii
           NGR234]
 gi|227342188|gb|ACP26406.1| putative modification methylase, HemK family [Sinorhizobium fredii
           NGR234]
          Length = 298

 Score =  248 bits (635), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 105/213 (49%), Positives = 142/213 (66%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            ++RILG R+F+ +   LS +T EPRP+TE LVD  + +      ++   R++D+GTGTG
Sbjct: 71  PVYRILGEREFHGLTFRLSKETLEPRPDTETLVDCLIPYVRRIAARKGCCRLIDMGTGTG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           A+CLALL  +   +G G DIS  AL  A+ NA  NG+++RF TL+SDWF +VEG FD+IV
Sbjct: 131 AICLALLAAALEARGFGTDISEDALATARENAKRNGLADRFQTLRSDWFETVEGRFDIIV 190

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI S +V  L  EVR  DP  +LDGG DGL  YR IA    RHL  DG+  +EIG+
Sbjct: 191 SNPPYIRSSVVGELEPEVRYHDPAAALDGGNDGLDVYRAIAQHAGRHLETDGVVGLEIGF 250

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +QK  V  +F+++   L+ +  D GGNDRVL+F
Sbjct: 251 DQKHAVTALFQAQGFRLLESAMDLGGNDRVLIF 283


>gi|283798431|ref|ZP_06347584.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1]
 gi|291073836|gb|EFE11200.1| protein-(glutamine-N5) methyltransferase [Clostridium sp. M62/1]
          Length = 338

 Score =  248 bits (634), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 78/298 (26%), Positives = 121/298 (40%), Gaps = 44/298 (14%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57
           +A  D+         +     ++D +  +     ++        I +      +  ILG 
Sbjct: 39  EAQLDAWYLFSESFPIDRVHFLMDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G + L+L  
Sbjct: 99  QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143
              +      D+S  AL +A  NA                                    
Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213

Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++LDG  DG
Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L  YR +A+   +HL + G    EIG  Q   V  +   +    +   KD  G DRV+
Sbjct: 274 LHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331


>gi|326386587|ref|ZP_08208209.1| HemK family modification methylase [Novosphingobium nitrogenifigens
           DSM 19370]
 gi|326208902|gb|EGD59697.1| HemK family modification methylase [Novosphingobium nitrogenifigens
           DSM 19370]
          Length = 282

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G+S   +++       D         + R + HE +  I G ++F+ 
Sbjct: 27  ARLDAEVLMAHALGVSRSDLVLRHMR---DSVPATFAPLVARRMTHEPVAYITGHQEFWG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +  +   PR +TE LV++A          R   RI+DLGTG+GA+  A L   P  
Sbjct: 84  LDFLVGPEVLIPRGDTETLVEAA----ETAFTARPPQRIIDLGTGSGALLCAALSIWPGA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           +G+G+D S  AL +A++NA   G+ +R   + +DW +       G FD++++NPPY+E+ 
Sbjct: 140 QGIGIDRSQGALAMARANANRLGLGQRARIIAADWHTPGWARDLGRFDLVLANPPYVETS 199

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L   V D +P  +L  G +GL  YR +   +   L  DG+  +EIG+ Q   V  +
Sbjct: 200 --ADLDRSVVDHEPHSALFAGAEGLDDYRVLVPQLGDLLAPDGIAMIEIGWTQGEAVCAL 257

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                        D GG  R +
Sbjct: 258 ARQGGFA-AQVHTDLGGRPRAV 278


>gi|325830609|ref|ZP_08164030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eggerthella sp. HGA1]
 gi|325487355|gb|EGC89797.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eggerthella sp. HGA1]
          Length = 345

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 55/313 (17%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 30  AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92
           +      PRPETE+LV  ALA                                       
Sbjct: 90  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 149

Query: 93  -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                            + +   + + DL TG+G +  ++  E P  + +  DI+ +A+ 
Sbjct: 150 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 209

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F+
Sbjct: 210 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 269

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V    
Sbjct: 270 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 329

Query: 252 DYGGNDRVLLFCR 264
           D  G  RVL   +
Sbjct: 330 DLAGRPRVLTARK 342


>gi|320120317|gb|ADW16126.1| hypothetical protein HMPREF0389_01680 [Filifactor alocis ATCC
           35896]
          Length = 279

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 5/260 (1%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V  +    +++  +  +   +       +    +   I  ++  + FY    
Sbjct: 24  DAQLLLMYVLQVDKLYLMIHLNEEVPLEKIGIYYELLAERKQSVPIAYLIHKKPFYGRDF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S     PRP+TE+L++  L      I     V  +++G G+GA+ + LL E+     V
Sbjct: 84  FVSPGVLIPRPDTEILIEKTLDV----IPDNKQVSGIEIGCGSGAISITLLLENRLLNMV 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
             DI    +EI   NA  N V  R   +++D F+ +    FD I+SNPPYI       L 
Sbjct: 140 ATDIEAIPIEITSKNANLNNVQNRLRLIKTDLFNGIPSKQFDFIISNPPYIPYDDSTKLM 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +V D++P+++L    +G+  +R I +   + L +DG  + EIG +Q   +  +      
Sbjct: 200 KDVIDYEPKVALFAEENGIFFFRKILEDGKKFLKEDGFVAFEIGCSQAKQIRELCLKEGF 259

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   +D  G DRV++  R
Sbjct: 260 HKVLIHRDLHGLDRVVIAFR 279


>gi|329117399|ref|ZP_08246116.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus parauberis NCFD 2020]
 gi|326907804|gb|EGE54718.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus parauberis NCFD 2020]
          Length = 282

 Score =  248 bits (634), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 78/248 (31%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
             S+   ++  +  +         + + +   H S   I G   F ++ L++      PR
Sbjct: 33  KWSTLDYLLHQNKEVSTGDLELFQSIMTQLKTHRSPQYITGNAYFRDLILSVDERVLIPR 92

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV   L            +R+LD+GTG+GA+ L L KE P ++    DIS  AL 
Sbjct: 93  PETEELVSLILEEH-----SDQSLRVLDIGTGSGAIALGLKKERPNWQIDAADISLDALS 147

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+ N     +    + L SD FS++   +D+IVSNPPYI     D +GL V   +P ++
Sbjct: 148 LAQENGRALDLE--INWLHSDLFSNILDKYDIIVSNPPYIAFEDKDEVGLNVWHSEPHLA 205

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYG 254
           L    +GL+ YR I +  S +L +DG    EIGY Q  D+  + E+      V   +DY 
Sbjct: 206 LFADDNGLAIYRAILEQASHYLTEDGAIYFEIGYKQGQDLKELAEANFPQCRVRLLQDYF 265

Query: 255 GNDRVLLF 262
           G DR+++ 
Sbjct: 266 GKDRMVVI 273


>gi|145588323|ref|YP_001154920.1| HemK family modification methylase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046729|gb|ABP33356.1| [protein release factor]-glutamine N5-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 283

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 130/265 (49%), Gaps = 7/265 (2%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++   +  +      L    ++   D  L+ +          + L  E I  ++G R F+
Sbjct: 20  EARILMAHILEKHYALPRSALLSRDDMALEVQALAHWKELESKRLDGEPIAYLIGKRGFH 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ L ++     PR ETELLVD  L       + + +V++LDLGTG+GA+ LAL  E+  
Sbjct: 80  NIELQVAPGVLIPRAETELLVDIGLKEIARLTDNQKMVKVLDLGTGSGAIALALTHEASN 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                 D S  AL IA+SNA    +  R    Q +W+ ++    +FD+I+SNPPYI +  
Sbjct: 140 ISVTATDQSLDALAIARSNAHYLELENRVCFAQGNWYEAISKNDVFDIILSNPPYIANHD 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P  +L     GL+   TI  G   HLN +GL +VE G++Q   VV + 
Sbjct: 200 PHLTQGDLR-FEPLSALTDHSTGLTCLETIIFGAKAHLNTEGLLAVEHGFDQSEAVVELM 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +L  +    D  G++RV+   +
Sbjct: 259 RTAQLKDIQIHLDLAGHNRVVSGRK 283


>gi|314937738|ref|ZP_07845060.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a04]
 gi|314942364|ref|ZP_07849211.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133C]
 gi|314952117|ref|ZP_07855136.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133A]
 gi|314992372|ref|ZP_07857804.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133B]
 gi|314997441|ref|ZP_07862388.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|313588450|gb|EFR67295.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|313593097|gb|EFR71942.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133B]
 gi|313595736|gb|EFR74581.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133A]
 gi|313598877|gb|EFR77722.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133C]
 gi|313642876|gb|EFS07456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecium
           TX0133a04]
          Length = 279

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 9/255 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                          ++  +  + + ++  +   +   L       +LG+ DFY+ RL +
Sbjct: 28  QFLFLERKQWKKLDWLLHMNEEISEEEQRLIETDLRLLLADHPPQYLLGYADFYDHRLKV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV+  L  +         + ++D+GTGTGA+ ++L      +    V
Sbjct: 88  TEATLIPRPETEELVEWCLDET-----PGVPLEVIDIGTGTGAIAISLKAARKNWHISAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +ALE+AK NA   G   +      D    V +  FDVI+SNPPYI     + +   
Sbjct: 143 DLSEEALEVAKENAQKEGT--KISFYHGDTLGPVMDQQFDVIISNPPYISRNEWELMDES 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR F+P+++L    DGL+ Y  IA      L  +G   +EIG+ Q   V + F+      
Sbjct: 201 VRSFEPKMALFAENDGLAIYEKIAVEAPSVLKSNGKIFLEIGFRQGEAVKKKFQQAFPDK 260

Query: 246 LVNAFKDYGGNDRVL 260
            V   KD  GN+R++
Sbjct: 261 KVAIKKDLFGNERMI 275


>gi|163783633|ref|ZP_02178622.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881126|gb|EDP74641.1| protoporphyrinogen oxidase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 270

 Score =  248 bits (634), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 119/263 (45%), Gaps = 7/263 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  RD    L  +      ++ +  + V  +         +    +      ++G  DFY
Sbjct: 13  ELRRDGEIILAHLLKRRPGELYLLSEEV-PEEVVKKFKRLMKLRERGFPTAYLIGEWDFY 71

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETELLV+     +L  I     +   ++G GTG + + LL E   
Sbjct: 72  GRTFKVKEGVLIPRPETELLVEK----TLELIPADKEMEGFEVGGGTGCISITLLLERGL 127

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +    D++  A+E+ K NA  +GV  R +  + D FS V+G  FD IVSNPPYI     
Sbjct: 128 LRMAVDDVNPTAVELMKENAKIHGVDYRLEVFEGDMFSPVKGRRFDFIVSNPPYIPENFW 187

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR  + R +L GG  G   Y   A  V RHL   G  ++EIG++Q   V  + +
Sbjct: 188 ERLPPEVRR-EGREALIGGEKGYEFYERFAKEVPRHLKGGGFVALEIGHDQGRVVEELLK 246

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V  +KDY G DRV++  
Sbjct: 247 GAGFERVIIYKDYSGQDRVVIAW 269


>gi|295090781|emb|CBK76888.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium cf. saccharolyticum K10]
          Length = 338

 Score =  248 bits (633), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/298 (25%), Positives = 121/298 (40%), Gaps = 44/298 (14%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57
           +A  D+         +     ++D +  +     ++        I +      +  ILG 
Sbjct: 39  EAQLDAWYLFSESFPIDRVHFLMDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G + L+L  
Sbjct: 99  QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143
              +      D+S  AL +A  NA                                    
Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213

Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++LDG  DG
Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L  YR +A+   ++L + G    EIG  Q   V  +   +    +   KD  G DRV+
Sbjct: 274 LHFYRILAEECRKYLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331


>gi|239907763|ref|YP_002954504.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
 gi|239797629|dbj|BAH76618.1| protein methyltransferase hemK [Desulfovibrio magneticus RS-1]
          Length = 301

 Score =  248 bits (633), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 6/256 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L +  GL    +I+  D  L   +   +   + R  K E +  ILG R+FY +   
Sbjct: 45  AQLLLSQALGLDRLGLILAMDRPLTPEELDLVRPLVARRGKGEPVAYILGEREFYGLDFA 104

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PRPETEL++D     SL      ++    DLGTG+G + + L    P   G+ 
Sbjct: 105 VTPATLIPRPETELIID----RSLELFPAGELTSFADLGTGSGCLAVTLAVRFPGATGLA 160

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +D+S +AL +A+ NAV + V++R    ++D+    +    + ++VSNPPY+ +       
Sbjct: 161 LDLSPEALAVARQNAVRHQVAQRLTFFEADFADLPAHGEGYGLVVSNPPYVSAAEYRECS 220

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR+F+P  +L  G  GL    T+A      L   G   VEIG+ Q             
Sbjct: 221 REVREFEPSSALTPGETGLEAVPTVARAALSRLAPGGTLLVEIGWKQGPAAAAFLAEAGF 280

Query: 245 FLVNAFKDYGGNDRVL 260
             V   +D  G +RV+
Sbjct: 281 TDVVVRRDLAGLERVV 296


>gi|33519809|ref|NP_878641.1| putative protoporphyrinogen oxidase [Candidatus Blochmannia
           floridanus]
 gi|33504154|emb|CAD83416.1| methylase of polypeptide chain release factors [Candidatus
           Blochmannia floridanus]
          Length = 281

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 124/261 (47%), Gaps = 7/261 (2%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +   RDS   L  VT  S  Q++   ++ L   Q   L + I R  K E I  ++G ++F
Sbjct: 19  LSPRRDSEIILEIVTKKSREQLLTFEETTLTPEQIKKLQSLIDRRKKSEPIAYLVGSKEF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++   +S   F PR +TE L++  L      I   + +++LDLG+G G++ LAL  E P
Sbjct: 79  WSLSFKISPGVFIPRTDTECLIEEVLNL----IPDCNHLKVLDLGSGVGSIALALASERP 134

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +   G+D   +A+ +A  N   +      +  QS+WF+ ++   F +IVSNPPYI    
Sbjct: 135 TWNITGIDQQQQAVILAIKN-QKSYKFRNVEFKQSNWFTKIKKNKFHLIVSNPPYINEHD 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  ++  F+P+ +L     GL     I      HL   G   +E G+NQ   +  + 
Sbjct: 194 LHFLSQDI-HFEPKSALVSPYYGLKDLIIICKQSINHLYPMGWLCLEHGWNQGKYIRTLL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +     ++   DY   +R+ 
Sbjct: 253 HAIGFNNIHTILDYHQYERIT 273


>gi|317487896|ref|ZP_07946488.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA]
 gi|316913022|gb|EFV34539.1| hypothetical protein HMPREF1023_00186 [Eggerthella sp. 1_3_56FAA]
          Length = 331

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 125/313 (39%), Gaps = 55/313 (17%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGLS  ++  + +  L   +R  L   + R  K E +  I G   F ++ + 
Sbjct: 16  AQWLLSEATGLSRIELYANFEQPLSMGERDVLRAYVTRRGKGEPLQYITGEVGFRHITVK 75

Query: 67  LSSDTFEPRPETELLVDSALAFSLPR---------------------------------- 92
           +      PRPETE+LV  ALA                                       
Sbjct: 76  VRPGVLIPRPETEVLVSEALALLPAAPKRVAQHAWSEDDLPPATWPEGEAGEQRPERTAD 135

Query: 93  -----------------IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                            + +   + + DL TG+G +  ++  E P  + +  DI+ +A+ 
Sbjct: 136 QGVAEDGSTPGVAPGEPVPEPAPLLVADLCTGSGCIACSVAYEHPLARVMATDIAPEAVA 195

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N     + +R + L  D    V+    G FD++VSNPPY+ + ++D +  EV +F+
Sbjct: 196 LARDNVSALDLGDRVEVLSCDLGEGVDPALMGAFDLVVSNPPYVPTAVMDDIPREVAEFE 255

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           P ++LDGG DGL   R +     R L + G  + E+      +  R+ E      V    
Sbjct: 256 PALALDGGADGLDVLRRLLPWCRRALKEGGGFAFELHETCLGEAARLAEEAGFSDVRVTA 315

Query: 252 DYGGNDRVLLFCR 264
           D  G  RVL   +
Sbjct: 316 DLAGRPRVLTARK 328


>gi|256390408|ref|YP_003111972.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
 gi|256356634|gb|ACU70131.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
          Length = 303

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 110/266 (41%), Gaps = 10/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+    +   PD   D R        I R    E +  I G   F  
Sbjct: 43  PRHDAEELAAWVHGVRRTDLHRVPDHDFDAR----YWEVIARRANREPLQHITGAAYFRY 98

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++V  A+           +  I+DL TG+GA+ L++ +E P  
Sbjct: 99  LELAVGPGVFVPRPETEVMVGWAIDKLRALDVAEPL--IVDLCTGSGAIALSIAQEVPRA 156

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
           +   V++S  A   A  N   +   ER     +D       ++G  DV+VSNPPYI    
Sbjct: 157 RVHAVELSEDAYTWASRNIAASEAGERVTLHLADAVTALPELDGRVDVVVSNPPYIPLTE 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP ++L  G DGL   R +     R L   G  + E    Q  +V RIF
Sbjct: 217 WEYVAPEARDHDPELALFSGPDGLDLIRGLERTAQRLLKPGGWSAFEHSDKQGGEVQRIF 276

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R     +  +D     R +   +
Sbjct: 277 LEERGWAEASDHRDLTNRPRFVTARK 302


>gi|126663423|ref|ZP_01734420.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
 gi|126624371|gb|EAZ95062.1| possible protoporphyrinogen oxidase [Flavobacteria bacterium BAL38]
          Length = 293

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 126/263 (47%), Gaps = 13/263 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                +  L    V ++P+  L +       + +    + + I  I G   FY ++  ++
Sbjct: 29  ILTEYLHNLKRVDVALNPNFELSEDDVEKWNSILADLQQEKPIQYITGEAWFYGLQFEVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +T  PRPETE LV+  L   +        + ILD+GTG+G + ++L    P      +D
Sbjct: 89  ENTLIPRPETEELVEWILNSPITHYPL--PITILDIGTGSGCIPISLKANLPQANVSAID 146

Query: 129 ISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-------FDVIVSNPPYIESV 178
           +S KALE+AK NAV+N V   F   + L+ +  S +          F++IVSNPPY+ ++
Sbjct: 147 VSEKALEVAKRNAVSNKVEINFIQTNILEVEDLSQLPSPNFHHPSSFNIIVSNPPYVRNL 206

Query: 179 IVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P ++L     D L  YR IA    ++L+ +GL   EI      + V 
Sbjct: 207 EKQEIKKNVLDYEPHLALFVENTDALLFYRKIAQLALKNLSPNGLLFFEINQYLGKETVE 266

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           + ++     ++  KD  GNDR++
Sbjct: 267 LLKNLGFKNIDLKKDIYGNDRMI 289


>gi|119477465|ref|ZP_01617656.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143]
 gi|119449391|gb|EAW30630.1| Modification methylase HemK [marine gamma proteobacterium HTCC2143]
          Length = 285

 Score =  248 bits (633), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ D    LC         +   P++ +           + R +  E I  I G R F++
Sbjct: 21  AMLDVELLLCFCLEKRRSFLRAWPEAEVSTEHERHFLTLLERRIVGEPIAYITGERGFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRPETELLV+     +L  +       ILDLGTG+GA+ LAL  E   +
Sbjct: 81  LDLQVNASTLIPRPETELLVEK----TLELMSDAASADILDLGTGSGAIALALASEKSGW 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             V  D+   A+ +A+SN     +      L+S+WF ++    FDVIVSNPPYI+     
Sbjct: 137 CIVASDVQPNAVALAESNKAKYSL-NNVTVLESNWFDAIGNQCFDVIVSNPPYIDPQDNH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +V  F+PR +L     GL+    IAD    +L   G   +E GYNQ   V  +   
Sbjct: 196 LEEGDV-SFEPRSALVAENHGLADLEHIADCAGAYLKDRGWLLLEHGYNQADAVQALLLR 254

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                +    D  G  R+ 
Sbjct: 255 AGFTKIFTAVDLSGWGRLT 273


>gi|88803654|ref|ZP_01119178.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P]
 gi|88780387|gb|EAR11568.1| putative protoporphyrinogen oxidase [Polaribacter irgensii 23-P]
          Length = 301

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 11/266 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +     L     +++PD ++ D     L   I R  K E I  ILG  +FY +   ++
Sbjct: 35  ILMEEKLQLKRIDTVLNPDLIIGDVLVTSLKKIIDRLQKEEPIQYILGNTEFYGLPFLVN 94

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRD---------VVRILDLGTGTGAVCLALLKES 119
            +T  PRPETE LV   L        +            + ILD+GTGTG + ++L K S
Sbjct: 95  KNTLIPRPETEELVSWVLHEIKEIHGEHKNKATNAIETPLTILDIGTGTGCISVSLAKNS 154

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   +D S  AL IAK NA+ N V+  F  L     + +   FD+I+SNPPY+  + 
Sbjct: 155 PQSEITAIDNSATALHIAKKNALLNNVAVNFIQLDILKTTELPQKFDIIISNPPYVRELE 214

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V   +P ++L     + L  Y  IAD   + L K+GL   EI      + +++
Sbjct: 215 KVEINKNVLANEPHLALFVSDENPLLFYDKIADLAIQGLTKNGLLFFEINQYLAKETIKM 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
              +    +   KD  GNDR+LL CR
Sbjct: 275 LTKKGFHSIQLKKDLFGNDRMLL-CR 299


>gi|313896051|ref|ZP_07829605.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975476|gb|EFR40937.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 295

 Score =  248 bits (633), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 130/263 (49%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G     + V  D  L+  +     + +     H  +  +LG R+F  
Sbjct: 28  PRLDAEVLLAAVLGKDRMYLYVHFDEPLEPAELSTFRSYVKERGAHTPMAYVLGRREFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES-- 119
           +   ++ DT  PRP+TE+LV +A+ F   R       + I DLGTGTGA+ L++L  +  
Sbjct: 88  LEFCVTRDTLIPRPDTEILVQTAVDFLRARRAAGADAMSIADLGTGTGAIALSVLYHADV 147

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              +   VDIS  A  +A+ NA   G++ER    + D  + + G  +D+IVSNPPYI + 
Sbjct: 148 SDLRADAVDISPGAAAVARENAAQLGLAERCSVREGDLLAPLAGRTYDMIVSNPPYIPAG 207

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  +VR ++P ++LDGG DGL  YR +       L + G  +VE+G  Q  DV  +
Sbjct: 208 DIAELMTDVRAYEPHLALDGGADGLDFYRRMMADAPAMLKEGGAIAVEVGIGQAADVAAL 267

Query: 239 FESRK-LFLVNAFKDYGGNDRVL 260
            E    +      KD  G +RV+
Sbjct: 268 AERHPRIVRTETKKDLAGIERVV 290


>gi|254374924|ref|ZP_04990405.1| modification methylase [Francisella novicida GA99-3548]
 gi|151572643|gb|EDN38297.1| modification methylase [Francisella novicida GA99-3548]
          Length = 284

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 6/258 (2%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    +C V G+    + ++ D  LD      +   I+R L  E +  ILG++ F+N 
Sbjct: 25  KHDLQMIICDVLGVDKTYLYINSDKQLDKNTLKKIDEKILRLLAGEPLAYILGYKYFWNQ 84

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++ DT  PR +TE +V + L        K   ++ILDLGTGTGA+ LAL  E    +
Sbjct: 85  KLYVTKDTLIPRADTETVVATVLDDIQ---NKDAQLKILDLGTGTGAIALALAAELANSQ 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            V VD+  ++L++AK NA  N ++     +QS W+++++   FD+IVSNPPYI+      
Sbjct: 142 VVAVDLYQQSLDVAKKNAQANNIT-NVKFIQSSWYTNLDTDKFDIIVSNPPYIDLADT-N 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +   V+D++P  +L    +GL+  + I       LN  G   +E G+ Q   +  +F   
Sbjct: 200 IDQSVKDYEPARALFAADNGLADIKIIISQSKYFLNPRGFIYIEHGFTQADAITVLFSQY 259

Query: 243 KLFLVNAFKDYGGNDRVL 260
               +   KD   NDR  
Sbjct: 260 NFTDIKTVKDLNNNDRCT 277


>gi|295115023|emb|CBL35870.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [butyrate-producing bacterium SM4/1]
          Length = 338

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/298 (26%), Positives = 121/298 (40%), Gaps = 44/298 (14%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGW 57
           +A  D+         +     ++D +  +     ++        I +      +  ILG 
Sbjct: 39  EAQLDAWYLFSESFPIDRVHFLIDRNRPMHREIFEKGWPLFAERIEKRASRIPLQHILGS 98

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++F  +   ++     PR +TE LV+  L     R        ILD+ TG+G + L+L  
Sbjct: 99  QEFMGLSFRVNEHVLIPRQDTETLVEEVLRDCPDR-----NADILDMCTGSGCIGLSLAV 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVT---------------------------------- 143
              +      D+S  AL +A  NA                                    
Sbjct: 154 LGRYRSVTAADVSEDALRVAAGNAKRLFLIQKDVVRAESKNFPGLPLRTELTVWAGKNRE 213

Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N  + +F  ++SD FS      +DVIVSNPPYI S  V+ L  EVR+ +PR++LDG  DG
Sbjct: 214 NAETRQFRLVRSDLFSEFAAERYDVIVSNPPYIPSGEVEKLEPEVREHEPRLALDGSADG 273

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L  YR +A+   +HL + G    EIG  Q   V  +   +    +   KD  G DRV+
Sbjct: 274 LHFYRILAEECRKHLKEGGRVYFEIGCEQASAVTELLAQQGYTKIQVVKDAPGLDRVV 331


>gi|260891993|ref|YP_003238090.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ammonifex degensii KC4]
 gi|260864134|gb|ACX51240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ammonifex degensii KC4]
          Length = 287

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 11/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L  +T      +    D  +    +      + R L  E +  ++G ++F+
Sbjct: 21  EARLEAEVLLAHLTKRDRLFLYGAADLSVPFLTKLRFWELVGRRLAGEPLAYLIGKKEFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETELLV++ L     +++ +    ++D+GTG+GAV ++     P 
Sbjct: 81  GLELEVTPAVLVPRPETELLVETGLE----KVKGKGSPILVDVGTGSGAVAVSWAVSLPQ 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIE 176
            + + +DIS +AL  A+ NA  +GV ER   +  D  S ++     G  DV+ +N PYI 
Sbjct: 137 ARLLALDISPEALACAQRNARRHGVEERITFMAGDLLSPLKETPVAGKVDVVGANLPYIP 196

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  L  EVR  +PR +LDGG DGL+ YR +     + L   G    EI   Q+   +
Sbjct: 197 RAFLPALSREVRR-EPRQALDGGTDGLAFYRRLVLQAKQVLRPGGYLLCEIAPWQRSGAL 255

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
            +F       +   +D  G  R++L  
Sbjct: 256 ELF-DEDWDELEVKRDLAGRARLVLAR 281


>gi|121608525|ref|YP_996332.1| HemK family modification methylase [Verminephrobacter eiseniae
           EF01-2]
 gi|121553165|gb|ABM57314.1| modification methylase, HemK family [Verminephrobacter eiseniae
           EF01-2]
          Length = 294

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 110/260 (42%), Gaps = 12/260 (4%)

Query: 3   ALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A  D+   L    G +      ++      L             R    E +  + G ++
Sbjct: 28  ARIDAQLLLLHQLGRADAGRAWLLAHDSDALAPALHAQFLALCRRRAAGEPVAYLTGRKE 87

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY + L + +   +PRP+TE LVD AL    P        R+LDLGTG+GA+ LAL +  
Sbjct: 88  FYGLPLAIDARVLDPRPDTETLVDWALEVIAPL----PAPRVLDLGTGSGAIALALQRHC 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P    + +D S  AL +A++NA   G+       Q  W S     FD IVSNPPY+ +  
Sbjct: 144 PGAWILAIDASADALAVARANAGRLGLP--VQLAQGHWLSGAPAGFDAIVSNPPYLGAQD 201

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                      +PR +L  G DGL   R+I      HL   G   +E G++Q   V  + 
Sbjct: 202 PHL---AALAHEPRQALVSGADGLQDIRSIIGQAPGHLAAGGWLLLEHGHDQAAAVHALL 258

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +R    V +  D  G  R 
Sbjct: 259 SARGFARVQSRADLAGIARC 278


>gi|224536351|ref|ZP_03676890.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522048|gb|EEF91153.1| hypothetical protein BACCELL_01225 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 278

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 114/265 (43%), Gaps = 8/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G  +    +  D +L  ++   L + + R    E I  ILG   F 
Sbjct: 20  EAGNLSRIICCEILGQQTVDYYLGKDIILSVKEEQELESILARLHNFEPIQYILGEARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L    P      V R+LD+GTG+G + ++L KE P 
Sbjct: 80  GRTFRVTPGVLIPRPETEELVEMMLKELSP------VSRVLDVGTGSGCIAISLAKELPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIV 180
            +    D+S +AL IA +N+     S RF+      +   V   +DVIVSNPPY+     
Sbjct: 134 SQVTAWDVSGEALSIAAANSKALQASVRFEQRDVLTYEPCVADCYDVIVSNPPYVTEAEK 193

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V D++P ++L     D L  YR IA      L   G    EI      D V + 
Sbjct: 194 QEMEHNVLDWEPSLALFVPDTDPLRFYRRIAVLGLEMLTSGGKLYFEINRAFGKDTVAML 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  V   KD   NDR ++  +
Sbjct: 254 CETGYRAVRLQKDISHNDRFVIAEK 278


>gi|283856489|ref|YP_163245.2| Modification methylase HemK family protein [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|283775493|gb|AAV90134.2| Modification methylase HemK family protein [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 286

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 15/268 (5%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           M A  D+   +    G+    +++    + ++ L          AI R  ++E +  ILG
Sbjct: 30  MTARLDTELLMAHSLGIERDALLLGSWGEKEAPLS------FFEAIKRRKQNEPVAYILG 83

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +RDF+ +RLT++ D   PRP++E L+++A+A+   R +      ILDLGTG+GA+ LA L
Sbjct: 84  YRDFWTLRLTVTPDVLIPRPDSETLIETAIAYF--REQAFLPENILDLGTGSGALLLAAL 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            E    KG+GVD S +A++IA+ NA   G   R +     W   ++  FD+++ NPPYI 
Sbjct: 142 DEWKDAKGLGVDASPEAIKIARLNADKCGALPRVEFKIGHWGRGIQQKFDLLLCNPPYIA 201

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  +  +V  ++P ++L  G +GL  YR I  G+   L + G+  +EIG++Q  +V 
Sbjct: 202 RDAM--MPADVLHYEPHLALFSGDEGLDDYREIIPGIPSLLTERGIACLEIGFDQAENVS 259

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I +   L     F D     R +L  R
Sbjct: 260 MIAKETGLRS-RIFYDLEQRPRCVLLSR 286


>gi|319947034|ref|ZP_08021268.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis
           ATCC 700641]
 gi|319747082|gb|EFV99341.1| protein-(glutamine-N5) methyltransferase [Streptococcus australis
           ATCC 700641]
          Length = 278

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 11/260 (4%)

Query: 6   DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ S     R     +    ++     ++   +  L +   +  +H     I+G  DF  
Sbjct: 20  EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLDSIFEQLKQHIPAQYIIGSADFCG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T+      PRPETE LV   L  +       + +R+LD+GTG+GA+ ++L      +
Sbjct: 80  HVFTVDERVLIPRPETEELVALILEEN-----DGEPLRVLDIGTGSGAIAISLALARLNW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D+S +ALE+A+ NA  N +    D   SD    + G +D+IVSNPPYI    ++ 
Sbjct: 135 QVQASDVSEEALELAQENA--NQLEAVVDFKTSDVLDQIAGSYDLIVSNPPYISRDDLEE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +G  V   +P ++L    DG + Y  IA      L  DG   +EIGY Q   V  +F+  
Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPNVLTPDGKIYLEIGYKQGKKVKELFQEA 252

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 FPNKRVRVLKDQFGQDRMVV 272


>gi|15616336|ref|NP_244641.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
 gi|10176398|dbj|BAB07493.1| protoporphyrinogen oxidase [Bacillus halodurans C-125]
          Length = 289

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     +   + +      LD      L   +        +  ++G   FY  +  
Sbjct: 24  AEMLLRHYLQMDRARFLASFHEELDGELFQRLEEDLAAHASGVPVQHLIGVESFYGRQFQ 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE LV + L     + +K + + ILD+GTG+GA+ + L  E        
Sbjct: 84  VDQHVLIPRPETEELVLAVLKEIRRQFKKEEEITILDIGTGSGAIAVTLALEEERTNVTA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
           VDIS  AL++A  NA   G       +  D           FDVIVSNPPYI +V  D L
Sbjct: 144 VDISRDALQVAADNARRLGA--NVQLIHGDLGEPFLKTGERFDVIVSNPPYIPTVEKDTL 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN-KDGLCSVEIGYNQKVDVVRIFE-S 241
            + VRD +P ++L GG+DGL  YR +   +      + G+ ++EIG  Q +DV ++ + +
Sbjct: 202 AVHVRDHEPALALFGGVDGLDVYRRLMSQLPALTKEEKGMVALEIGAGQGMDVEKLMQTA 261

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                V+   D  G DR++L 
Sbjct: 262 YPKAAVDVLYDLNGKDRIVLA 282


>gi|312131682|ref|YP_003999022.1| proteiN-(glutamine-n5) methyltransferase, release factor-specific
           [Leadbetterella byssophila DSM 17132]
 gi|311908228|gb|ADQ18669.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Leadbetterella byssophila DSM 17132]
          Length = 275

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 15/262 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L ++ G+S   +++     + +     L   I R  + E I  ILG   F 
Sbjct: 22  EAREIAFLLLQKLWGISRTDLLIGETQHVAEE----LDLYIERINQGEPIQYILGEAWFM 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N R  ++     PRPETE LV          +      ++LDLGTG+G + + +  E+P 
Sbjct: 78  NRRFHVNPSVLIPRPETEELV--------THVSALSPKKVLDLGTGSGCIPVNIALENPE 129

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVI 179
            +  G+DIS  ALE AK NA  +  + +F       F +  +   FD+I+SNPPY++   
Sbjct: 130 AEVFGIDISEHALETAKRNAEEHKANVKFALANMLDFQNPFLVQEFDLIISNPPYVKENE 189

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V DF+P ++L    +D L  YR IAD   +HL   G   +EI      +   +
Sbjct: 190 KPEMRKNVLDFEPHLALFVSDLDPLIFYRAIADIAWKHLAPRGALWLEINSYLGKETAEL 249

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
           F  +    V   KD+ G +R L
Sbjct: 250 FSQKGYKHVRLLKDFFGKERFL 271


>gi|237715307|ref|ZP_04545788.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405148|ref|ZP_06081698.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_22]
 gi|294643552|ref|ZP_06721358.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CC 2a]
 gi|294807059|ref|ZP_06765878.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides xylanisolvens SD CC 1b]
 gi|229444616|gb|EEO50407.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356023|gb|EEZ05113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 2_1_22]
 gi|292641127|gb|EFF59339.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CC 2a]
 gi|294445758|gb|EFG14406.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 278

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  +    D
Sbjct: 87  SGVLIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N     +  R   LQ D  +        FDVIVSNPPY+     + +  
Sbjct: 141 ISEEALAIARKNNDA--LEARVRFLQRDVLADDWEKIPSFDVIVSNPPYVTETEKNEMDA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  + 
Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR++   R
Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278


>gi|227431145|ref|ZP_03913201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
 gi|227353097|gb|EEJ43267.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
          Length = 330

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 6/253 (2%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     ++   +  +    +         + +   +K++    ILG   FY     +  
Sbjct: 78  LLSGALNVNYGMLRANMSRQMPATLAALWPSWVSELVKNKPPQYILGHAPFYGREFMVDE 137

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV+  L  +      +  V +LD+GTG+GA+   L+ E+   KG   DI
Sbjct: 138 RVLIPRPETEQLVEWILKDA---GNTKHPVSVLDIGTGSGAIIETLMLENDRVKGFAADI 194

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A+ NA    +S     ++SD FS++ G  FD+IVSNPPYI +   + +   V 
Sbjct: 195 SQDALTVAEMNAQRFNLSH-LHFVESDVFSALSGLKFDLIVSNPPYISNSDENEMDDSVL 253

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
            F+P  +L    DGL+ Y  IA G+  HL + G    EIGY Q   V ++ ++      +
Sbjct: 254 TFEPHTALFAENDGLAIYEKIARGLDAHLTEYGRAYFEIGYKQGKAVQQLLQAALPKAKI 313

Query: 248 NAFKDYGGNDRVL 260
              +D+ G DR++
Sbjct: 314 TLRQDFSGLDRMI 326


>gi|27904664|ref|NP_777790.1| hypothetical protein bbp162 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|32129595|sp|Q89AT0|HEMK_BUCBP RecName: Full=Protein methyltransferase hemK homolog
 gi|27904061|gb|AAO26895.1| HemK [Buchnera aphidicola str. Bp (Baizongia pistaciae)]
          Length = 277

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  V       +I +    L       L   + R +  E I  ++  ++F+++ 
Sbjct: 23  LDAEILLSYVLKKCRTWIISNDFIKLTYDNLIDLNVLLQRRMNSEPISYLIHVKEFWSLP 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S+ T  PRP+TE+LV+ AL +    ++     ++LDLGTG G++ LAL  E    K 
Sbjct: 83  FLVSNSTLIPRPDTEILVEKALIY----LKNLSNAKVLDLGTGCGSIALALASERLDCKI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+D   +++ IA  NA    +      L S WFS V+ +FD+IVSNPPY+    +  + 
Sbjct: 139 IGIDCVKESISIASKNAKILKLK-NVSFLHSIWFSKVDNMFDMIVSNPPYLSFSEMKNVD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV  F+P I+L    +GL   R I     ++L       VE G+ QK  V   F     
Sbjct: 198 KEVL-FEPFIALFSSENGLGAIRHIIKYSKKYLYSKAWLLVEHGWKQKDKVQSFFYKYSF 256

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +N ++DY  +DRV +  +
Sbjct: 257 ININTYRDYCDSDRVTVGQK 276


>gi|333029740|ref|ZP_08457801.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides coprosuis DSM 18011]
 gi|332740337|gb|EGJ70819.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides coprosuis DSM 18011]
          Length = 277

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 7/252 (2%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           +  L    V +  D  L   +R  L  +I R   HE I  + G   FY  R  +      
Sbjct: 32  ILKLDEMDVYLRKDIKLSRSKRDRLKQSIKRLQNHEPIQYVSGSAYFYGSRFRVKQGVLI 91

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE LVD  L       E +    +LD+GTG+G + +++ K +P  K    D+S  A
Sbjct: 92  PRPETEELVDLILR------ENKGRYALLDIGTGSGCIAISIAKNNPEAKVEAWDVSDDA 145

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+IA+SN        RF       + S +  FDVIVSNPPYI +     +   V +++P 
Sbjct: 146 LKIARSNNKKLETHVRFRKQDILTYHSKKRKFDVIVSNPPYITNKEKKLMDKNVLNWEPE 205

Query: 194 ISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++L     + L  Y  I +     L + G    EI     V V ++ E +    V   KD
Sbjct: 206 VALFVEDHNPLLFYNRIGEVGLFLLRRGGRLYFEINQAYGVQVAKLLEQKGYKNVQVLKD 265

Query: 253 YGGNDRVLLFCR 264
             G DR++   R
Sbjct: 266 LFGKDRIVTAER 277


>gi|257867024|ref|ZP_05646677.1| modification methylase HemK [Enterococcus casseliflavus EC30]
 gi|257873359|ref|ZP_05653012.1| modification methylase HemK [Enterococcus casseliflavus EC10]
 gi|257801080|gb|EEV30010.1| modification methylase HemK [Enterococcus casseliflavus EC30]
 gi|257807523|gb|EEV36345.1| modification methylase HemK [Enterococcus casseliflavus EC10]
          Length = 285

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 128/256 (50%), Gaps = 8/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                +         ++  D  +       +   + + L+HE    +LG+ +FY  RL +
Sbjct: 27  QYLFLQRKNWQQLDWLLQMDQPILREDEAQIAADLEQLLQHEPPQYLLGYEEFYGHRLKV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PRPETE LV++ L     ++     +R++D+GTGTGA+ +AL    P +    V
Sbjct: 87  TPATLIPRPETEELVENCLT----KLPADQPLRVVDIGTGTGAIAIALKLARPQWAVSAV 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S +AL +AK NA   G   RF   Q D    V +  +D+IVSNPPYI +     + + 
Sbjct: 143 DLSAEALAVAKENAAALGAEIRF--FQGDTLEPVADQQWDLIVSNPPYISAEEWPLMDIS 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           VR+ +P+++L     GL+ Y+ +A      L  +G  ++EIG+ Q + V ++F +     
Sbjct: 201 VREKEPKMALFAQEQGLAIYKQLAQQAPNCLAPNGQMALEIGFQQGLVVQQLFAAAFPNK 260

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD  G DR++ 
Sbjct: 261 EVTVVKDLAGQDRMVF 276


>gi|332519660|ref|ZP_08396124.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lacinutrix algicola 5H-3-7-4]
 gi|332044219|gb|EGI80413.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lacinutrix algicola 5H-3-7-4]
          Length = 291

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 9/252 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            ++  Q+ +D D  ++  ++  + NA+      + I  I+G  +FY +   ++  T  PR
Sbjct: 38  NVTRLQLALDSDLAINKEEQTVIFNALEDLKNEKPIQYIIGETEFYGLPFKVNKHTLIPR 97

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV   L  +  ++++   +  LD+GTG+G + ++L KE    +   +D+S +A++
Sbjct: 98  PETEELVTLVLKTAKQKLKESKPLTCLDIGTGSGCIAISLAKELKEAQVYAIDVSTEAIK 157

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRD 189
            AK NAV N V+   + ++ D  ++          F+VIVSNPPY+ ++    +   V +
Sbjct: 158 KAKENAVLNNVA--VEFIKCDILNACNETLNKDLKFNVIVSNPPYVRNLEKAEIKNNVLN 215

Query: 190 FDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +P ++L    D  L  Y+ IA+  ++ L+K+G    EI      +   + E+     V 
Sbjct: 216 NEPHLALFVEDDNPLLFYKAIAEFATKKLHKNGKLFFEINEYLGEETKALVENIGFKNVE 275

Query: 249 AFKDYGGNDRVL 260
             KD    DR+L
Sbjct: 276 IIKDIFNKDRML 287


>gi|118602770|ref|YP_903985.1| HemK family modification methylase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567709|gb|ABL02514.1| [protein release factor]-glutamine N5-methyltransferase [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 261

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 80/255 (31%), Positives = 125/255 (49%), Gaps = 14/255 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L      +  Q+I   D   ++ ++  L   I +         + G + FY++   ++ 
Sbjct: 18  LLSLALNKNHVQLITHYDYQPNNEEKTQLNQLIKQRQFGIPFAYLSGTKGFYHLDFKVTP 77

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRPETELL+D AL       +K    ++LDLGTG+G + + L  ++P +     D 
Sbjct: 78  STLIPRPETELLIDIALGL----FDKNQTCKVLDLGTGSGIIIITLGDKNPQWHLTATDS 133

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL+IA+ NA TN      +     WF +     FD+I+SNPPYI+            
Sbjct: 134 SINALDIAQQNAKTN-----INFQLGSWFKATPNQIFDLIISNPPYIKQSDPHLND---L 185

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            F+P+ +L  G DGL   RTI +   +HLNK G   +E G++Q+ +++++  S   F + 
Sbjct: 186 SFEPQSALVSGKDGLDDIRTIINNAPQHLNKKGYILLEHGFDQQQEIIQLL-SNNFFNIQ 244

Query: 249 AFKDYGGNDRVLLFC 263
            FKDY   DR LL  
Sbjct: 245 KFKDYNQQDRALLAQ 259


>gi|114569198|ref|YP_755878.1| HemK family modification methylase [Maricaulis maris MCS10]
 gi|114339660|gb|ABI64940.1| [protein release factor]-glutamine N5-methyltransferase [Maricaulis
           maris MCS10]
          Length = 319

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 97/261 (37%), Positives = 146/261 (55%), Gaps = 8/261 (3%)

Query: 6   DSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +S   +  V   +     + DP ++   +    L     R L    + ++LG + F+ + 
Sbjct: 56  ESRFLINHVLAPVRLADALADP-ALFSWQAADELAALAWRRLARVPLSQVLGSQPFWTLD 114

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +SSD   PR +TE LV++ LA +          R++DLGTG+GA+ LALL E P + G
Sbjct: 115 LAVSSDVLTPRADTEALVEAVLAEA-----GEASARLVDLGTGSGAILLALLSERPGWSG 169

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           +GVD+S  AL IA +NA   G++ R + +Q  W + + +G  D++VSNPPYI S I+  L
Sbjct: 170 LGVDLSAPALAIATANADRCGLANRAEFMQGRWGAGLADGSVDILVSNPPYIVSDILAGL 229

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVRD +P ++LDGG+DGL  YR I   + R L  +GL ++EIG++Q V V  +     
Sbjct: 230 EPEVRDHEPALALDGGVDGLDAYREIIADLPRLLVSNGLFALEIGHDQGVTVSALAREAG 289

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
           L  +    D  GNDRV+L  R
Sbjct: 290 LVDIRVLPDLAGNDRVVLGRR 310


>gi|317401194|gb|EFV81840.1| protein-(glutamine-N5) methyltransferase [Achromobacter
           xylosoxidans C54]
          Length = 275

 Score =  247 bits (631), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +    L  V       ++      L             R L  E +  +LG R+F  
Sbjct: 15  PRLEVRMLLEHVLAKPRAWLLAHDTDPLAPEVAAAYEALAQRRLAGEPMAYLLGQREFMG 74

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PRP+TE+LV++AL      +  +    +LDLGTG+GA+ +++       
Sbjct: 75  HMFRVTPDVLIPRPDTEVLVETALEC----VAGQAAPAVLDLGTGSGAIAISIALARRDA 130

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           + +  D+S  AL +A        ++     ++  W+ +V     FD+IVSNPPY+ S   
Sbjct: 131 RVMASDVSAAALAVAAG--NAWELTASVRFVEGSWYDAVPAGEGFDLIVSNPPYVASDDP 188

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+PR +L  G DGL   R I  G  RHL   G   +E G++Q   V  +  
Sbjct: 189 HLGQGDVR-FEPRGALTDGADGLEDLRRIVAGAHRHLKAGGALWMEHGWDQAEAVRALLA 247

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +     V++ +D  G +R+
Sbjct: 248 ATGFSDVHSRRDLAGIERI 266


>gi|325914285|ref|ZP_08176635.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539540|gb|EGD11186.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 284

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +       +           + R    E +  + G R F+ + L
Sbjct: 25  DAEPLLLHALGRDRAWLFAHGRDPVPPALAQAFDTLVQRRQAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S+ T  PR +TE LV+ AL     R++     R+ DLG G+GA+ LA+  E P  + +
Sbjct: 85  AVSTATLIPRADTEALVELALE----RLDHAPGRRVADLGAGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL IA+ NA ++G+S         WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAIAQRNADSHGLS-NVHCRHGSWFAPLAGERFDLIASNPPYIAAGDPHLAQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R+I      HL   G   +E G++Q   V  +      
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRSIVADAPAHLRAGGWLLLEHGWDQGAAVAELLRRCGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    +RV L  
Sbjct: 259 AQVATHQDLEQRERVTLGR 277


>gi|317132919|ref|YP_004092233.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ethanoligenens harbinense YUAN-3]
 gi|315470898|gb|ADU27502.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ethanoligenens harbinense YUAN-3]
          Length = 287

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +   L   ++ +  D+ + +     L   + R    E +  +LG  +F  +  
Sbjct: 23  DAACLLEKHVRLRREELPLRGDTPVAEDVCTALWADVERRAAGEPLQYLLGEWEFMGLPF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETELLV++A+A+   +       R+L+L  G+G V ++  + +   + V
Sbjct: 83  KVGPGVLIPRPETELLVEAAIAYLNVQPPDAAAPRLLELCAGSGCVAISAARAT-GCEAV 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVD 181
            ++ S  AL   ++N   +G+ +R   ++ D        + G FDV++ NPPYI +  + 
Sbjct: 142 CLEYSADALGYLRANIALHGLEDRVRAVEGDMLLPPRGVLSGSFDVLLCNPPYIRTEELP 201

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++LDGG DGL  YR +   V   L   GL + E+G  Q  DV R+ E 
Sbjct: 202 ALQAEVRR-EPVLALDGGPDGLRFYRALCAWVP-VLRPGGLLACEVGMGQAEDVARLLED 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V    DY G  R++   R
Sbjct: 260 AGLCNVAVRNDYAGIGRMVRGYR 282


>gi|212697118|ref|ZP_03305246.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675893|gb|EEB35500.1| hypothetical protein ANHYDRO_01684 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 263

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 8/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   + + + +  +  L+      L     +  K   +   +G  +FY + L +   
Sbjct: 18  LTYLLNTNKNLLYLKKEEKLEKDIEERLLKIQDKISKGYPLQYAIGKWNFYGLDLLVDKR 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE+LVD  +       +K    +ILD+G+G+GA+ LAL       K +GVDIS
Sbjct: 78  ALIPRYETEILVDLIIN------DKVKKDKILDIGSGSGAISLALSYNLKNSKVLGVDIS 131

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A+ ++  N   N   +  +  +SD FS+VEG FD+IVSNPPYI     + L  +   +
Sbjct: 132 KDAINLSNEN-KKNLSIKNVEFKESDIFSNVEGKFDIIVSNPPYINKEDFENLDKK-LSY 189

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L GG DGL  YR I     + LNK+G   +EIGY+QK  ++++ +      + A+
Sbjct: 190 EPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNPIIKLLKEEGYKDIRAY 249

Query: 251 KDYGGNDRVLLFC 263
           KD+   DR++  C
Sbjct: 250 KDFNDFDRIIKAC 262


>gi|331002271|ref|ZP_08325790.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral
           taxon 107 str. F0167]
 gi|330411365|gb|EGG90781.1| protein-(glutamine-N5) methyltransferase [Lachnospiraceae oral
           taxon 107 str. F0167]
          Length = 275

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 14/263 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSLKHESIHRILGWRDF 60
            A  D    +  +  L   +  +     + D  +   L   + + L +  +  I+    F
Sbjct: 21  DAASDILLLIYEIFDLDFSKWTMYKYETIKDISKLETLKEYVEKRLTNMPVQYIVNKAYF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             + L +  +   PR +TE+LV+  L             +ILD+ TG+GA+ +AL K   
Sbjct: 81  CGLPLYVDENVLIPRFDTEVLVEEVLNL------GDKNKKILDVCTGSGAIAIALKKLGK 134

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
           F +   +DIS +AL+IAK NA        F  L+SD FSS+  E  +D+IVSNPPYI+S 
Sbjct: 135 FERVDALDISEEALKIAKKNAKALECDINF--LKSDMFSSLTSENKYDIIVSNPPYIQSH 192

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           IVD L  +V+DF+PR++LDG IDG+  Y+ I       L+  G+  +EIGY++  D+  +
Sbjct: 193 IVDSLERQVKDFEPRLALDGDIDGMKFYKIIEKNFMNFLSPGGILGLEIGYDEASDIKNL 252

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
           FE +K   V   KD  G DRV +
Sbjct: 253 FEDKK---VIIKKDLAGLDRVAI 272


>gi|42521716|ref|NP_967096.1| HemK protein [Bdellovibrio bacteriovorus HD100]
 gi|39574246|emb|CAE77750.1| HemK protein [Bdellovibrio bacteriovorus HD100]
          Length = 293

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 136/270 (50%), Gaps = 16/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L     L   Q+ +  D  + D +   L   + R    E +  I+G+RDF+N
Sbjct: 22  PRLDAELLLAHGLKLERIQLYLRFDQPMKDEELAVLRELVRRRASGEPVAYIMGYRDFFN 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  +++    PRPETE +V+  LA++    +K   + ++DLG G+G + L+LLKE P  
Sbjct: 82  HRFEVNNQVLIPRPETEHIVEDVLAWA---SDKEASLGLIDLGCGSGCIGLSLLKEYPNA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---------WFSSVEGL--FDVIVSN 171
           K + VD+   A+E+A+ NA +  V++R   L  D          +    G    DV+VSN
Sbjct: 139 KLIAVDLLPGAIEVAQRNAQSLDVADRVQFLNLDAGNVEAIMSAYKDFTGQSSIDVLVSN 198

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI S     +   V+ F+P  +L     GL+  +  +   + +L   GL  +E+G +Q
Sbjct: 199 PPYIASDD-PQVEENVKKFEPNSALYAEDSGLALLKGWSKAFAPYLKTPGLMLMEMGMSQ 257

Query: 232 KVDVVRIFESRKLFL-VNAFKDYGGNDRVL 260
              + + +ES K+F  ++  KD  G+DRV+
Sbjct: 258 GPAMKQAYESLKIFNEISVIKDLSGHDRVI 287


>gi|150010265|ref|YP_001305008.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis
           ATCC 8503]
 gi|255012466|ref|ZP_05284592.1| putative protoporphyrinogen oxidase [Bacteroides sp. 2_1_7]
 gi|149938689|gb|ABR45386.1| putative protoporphyrinogen oxidase [Parabacteroides distasonis
           ATCC 8503]
          Length = 318

 Score =  246 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 46/300 (15%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       + RV GLS+HQ+++     L D ++F +   +     ++ I  +LG  DFY
Sbjct: 20  EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PRPET  LV+  +        +    RILD+GTG+G + ++L K  P 
Sbjct: 80  GMEFKVTPDVLIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPE 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE---------------------------RFDTLQ 154
            +   VDIS +AL +A+ NA  N VS                            RF   +
Sbjct: 135 AEVAAVDISPEALAVAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTR 194

Query: 155 SDWF-------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200
           +  F             +S+ G  + IVSNPPYI       +   V + +P ++L     
Sbjct: 195 NKIFTYVKLKSHTEETEASLIGSLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDD 254

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D L  YR IA    RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 255 DPLLFYRAIARFGQRHLAEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|330815384|ref|YP_004359089.1| HemK protein [Burkholderia gladioli BSR3]
 gi|327367777|gb|AEA59133.1| HemK protein [Burkholderia gladioli BSR3]
          Length = 282

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 120/261 (45%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G S  Q+I   D+ L             R L  E + +++G R+F+ +  
Sbjct: 21  DARILLAHALGWSRTQLITRADAPLAAADAERYLALAARRLAGEPVAQLVGSREFFGLEF 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRP+TELLV+SALA     IE      +LDLGTG+GAV +A+    P  +  
Sbjct: 81  AVTPDVLIPRPDTELLVESALA----AIEGIAAPAVLDLGTGSGAVAVAIASMRPDARVQ 136

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA       R       L+SDW+ +++    F  IVSNPPYI    
Sbjct: 137 ALDRSAAALAVARGNAARLLDPARPGGALRFLESDWYGALDPLQRFHAIVSNPPYIACRD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL   R IA G    L   G   +E GY+Q   V  I 
Sbjct: 197 PHLEQGDLR-FEPRGALTDEADGLEAIRAIAAGAPAFLLPRGALWIEHGYDQAEAVRAIL 255

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +     V +  D    +R  
Sbjct: 256 AAAGFEAVASLTDLAAIERCT 276


>gi|160946321|ref|ZP_02093530.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270]
 gi|158447437|gb|EDP24432.1| hypothetical protein PEPMIC_00281 [Parvimonas micra ATCC 33270]
          Length = 266

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 10/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  +TG  S ++ +D    +D          I +  ++  +  I G  +FY + L +
Sbjct: 17  WLILEYLTGKKSVELKMDLRFCVDS-IYNDFLEIIEKRKQNYPLQYIFGKWEFYGLELFV 75

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PR ETE+LVD  +  +  +       +ILD+G G+GA+ LAL K        GV
Sbjct: 76  DESALIPRFETEILVDEIVKLNCKKD------KILDIGCGSGAISLALAKNLYKSYIYGV 129

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           DIS +A+ ++  N     +       +SD FS V+   FD+IVSNPPYI+   +  L  E
Sbjct: 130 DISKEAINLSNKNKEKLNLQ-NIKFFESDIFSKVDEKHFDIIVSNPPYIDDAEMKTLEKE 188

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              F+P+ +L GG DGL  YR I      +L++ G+ + EIGYNQ   +  +       +
Sbjct: 189 -LSFEPQNALYGGQDGLFFYREIIINSLDYLSEKGVLAFEIGYNQMEIISNLLIENGFEI 247

Query: 247 VNAFKDYGGNDRVLLFCR 264
           + A KD+ G DR+L+  R
Sbjct: 248 LIAKKDFAGFDRILIAKR 265


>gi|227499755|ref|ZP_03929855.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus tetradius ATCC 35098]
 gi|227218141|gb|EEI83407.1| polypeptide chain release factor methyltransferase HemK
           [Anaerococcus tetradius ATCC 35098]
          Length = 272

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 8/254 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  +   +   +I+     L++  R  L   I +  K   +   +G  +F+ +   +   
Sbjct: 26  LTYLLNTNKSSIILRSGEELNNEIRVKLEEIIDKCEKGYPLQYAIGQWEFFGLNFKVDER 85

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE++VD  +     +       +ILD+GTG+GA+ L+L K       +  DI 
Sbjct: 86  ALIPRFETEIIVDYLIKAPFKKD------KILDIGTGSGAIALSLAKNLKASDILASDIE 139

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +AL +A+ N     +S     ++SD F  + G FD+I+SNPPYI S   + L   +  +
Sbjct: 140 DRALSLAEENKKRLKIS-NVSFIKSDLFEEISGKFDIIISNPPYINSKDFEKLDKTLY-Y 197

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P+ +L    +GL  Y+ I    S +LN+      EIGY+QK D+  +        +   
Sbjct: 198 EPKSALLAEENGLYFYKRIIKDASSYLNEGARLVFEIGYDQKSDISSLLNESDFKNIICI 257

Query: 251 KDYGGNDRVLLFCR 264
           KDY   DR ++  +
Sbjct: 258 KDYNDFDRFIIAEK 271


>gi|21241678|ref|NP_641260.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21107043|gb|AAM35796.1| protoporphyrinogen oxidase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 286

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRGWLFMHGRDAVPLSIAQAFDALVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTEALVELALE----RLDTLPGRRVADLGTGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA ++ +    +     WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMAQRNADSHSLR-NVECRLGGWFAPLAGETFDLIASNPPYIAAHDSHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +R  
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGAAVAELLVARGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV L  
Sbjct: 259 AAVATHQDLEQRDRVTLGR 277


>gi|304415272|ref|ZP_07395968.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
 gi|304282878|gb|EFL91345.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
          Length = 273

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 80/247 (32%), Positives = 121/247 (48%), Gaps = 22/247 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG +   ++   ++ L   Q F L   + R  + E I  ++G R+F++
Sbjct: 21  PKRDAEILLSFVTGRARTFLLAFSETELTGEQLFKLAPLVERRQQGEPIAYLVGEREFWS 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+SS +  PRP+TE LV+ AL          D  RILDLG+G+GA+ LAL  E P  
Sbjct: 81  LPLTVSSASLIPRPDTESLVEQALVCL-----PADACRILDLGSGSGAIALALASERPDC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---------------FSSVEGLFDV 167
             +G+DI+  A+ +A+ NA+   +      +Q +W               FSS+   F +
Sbjct: 136 LVIGIDINADAVTLARHNALKLAI-NNLRFVQGNWFNINAFTKQGVERDHFSSLMAGFRL 194

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPPYI S        +VR ++P  +L  G DG+     I      +L  +G   VE 
Sbjct: 195 IVSNPPYIASDDPHLKMGDVR-YEPVEALVAGDDGMDDLVIIVRQAPAYLLSEGWLLVEH 253

Query: 228 GYNQKVD 234
           G+ Q   
Sbjct: 254 GWQQAKK 260


>gi|188587461|ref|YP_001919006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352148|gb|ACB86418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 321

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 136/281 (48%), Gaps = 22/281 (7%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++++   L  +      +++  P+  L   Q   L   +++  +      + G R+F  +
Sbjct: 37  IKEADFLLAFILDWDRSKLLAYPEKHLSSGQYKELKELVIKRSEGTPYAYLTGKREFMGL 96

Query: 64  RLTLSSDTFEPRPETELLVDSALAFS--------------LPRIEKRDVVRILDLGTGTG 109
             T++ +   PRP+TE++V+ AL                 L   E    ++ILD+ TG+G
Sbjct: 97  EFTVTENVLIPRPDTEVVVEFALNCLGKIILKDNPNNKKELQFNELNSPIKILDICTGSG 156

Query: 110 AVCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EG 163
            + L++            +    DIS KALEIA  NA   G+  +   ++SD FS+  + 
Sbjct: 157 NIGLSIAYYFNKMYGQNLELTLSDISDKALEIAHINASNLGLLSQCKFVKSDLFSNTSDD 216

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + +I +NPPYI S     L  EV+  +P  +L  G DGL +Y+ I+  + ++L++DG+ 
Sbjct: 217 NYRLITANPPYISSKHYSTLSKEVKL-EPAHALLAGEDGLYYYKKISQQIKKYLSQDGVL 275

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             EIG +Q+ +V  +  ++ L  V + +D  G  R++   R
Sbjct: 276 IFEIGEDQQEEVENMLSTQNLV-VTSEQDLAGRPRLIAASR 315


>gi|330996374|ref|ZP_08320257.1| protein-(glutamine-N5) methyltransferase [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573232|gb|EGG54846.1| protein-(glutamine-N5) methyltransferase [Paraprevotella
           xylaniphila YIT 11841]
          Length = 284

 Score =  246 bits (629), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 6/263 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L    GL+   + +  +      +R  L N + R  + E +  +LG  DF 
Sbjct: 20  EARAIARLVLETRFGLTQVDICMGRERTFSLEERRDLENIVKRLSQKEPVQYVLGQADFC 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               +++     PRPETE L +  +     +  +     ILD+GTG+G + + L +E P 
Sbjct: 80  GRTFSVAPGVLVPRPETEELAEWIIRD--EKASEFSSPHILDIGTGSGCIAITLSQELPQ 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            +   +DIS +AL IA+ NA   GV+  F   D L S        L+D+IVSNPPYI   
Sbjct: 138 AQVSAIDISPQALAIARENAECLGVAVNFRCQDILDSPSKEQDSPLWDIIVSNPPYICEH 197

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             + +   V  ++P  +L     D L  YR I +   + L + G   +EI      +  R
Sbjct: 198 EREDMEENVLRYEPSQALFVPDHDPLLFYRAIGEYAVKMLKEGGRLYMEINRAYGRETAR 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           +F+   L  +   KD  GN+R++
Sbjct: 258 LFQHLGLRDIIVRKDLYGNERMV 280


>gi|289432896|ref|YP_003462769.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalococcoides sp. GT]
 gi|288946616|gb|ADC74313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalococcoides sp. GT]
          Length = 277

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 10/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       +   L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETAYFETLQHRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+      
Sbjct: 137 AYVYAADISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAE-- 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               E+ + +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + +  + 
Sbjct: 195 ---AELLNGEPRLALDGGKDGLDLYRRLIPFLPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263
                 +    DY G  R++   
Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274


>gi|116329264|ref|YP_798984.1| methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
 gi|116122008|gb|ABJ80051.1| Methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis L550]
          Length = 286

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  L   ++ V+ + +L + ++      IV   K++    I G + FYN
Sbjct: 26  ARLDAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYN 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRPETE LV+  L   L          +LDL TG+G + ++L      +
Sbjct: 86  SVFFVNEKVLIPRPETEELVEKIL---LDFKGNNSEQNVLDLCTGSGCIGISLKSARKDW 142

Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                DIS  ALEIAK NA    G       L+S+ F S+  E  FD+IV+NPPYI    
Sbjct: 143 NITLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  +V D++P ++L    D       + +    HL + G   +E   +     V   
Sbjct: 203 KTEMMKDVVDYEPHLALF-LEDPKEFLSKLIEDARIHLKEGGKFYMETYPSLAWTFVSES 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +         KD  G DR ++  +
Sbjct: 262 TTNGWKEGKVEKDLSGKDRFVVLTK 286


>gi|311898377|dbj|BAJ30785.1| putative protein methyltransferase HemK [Kitasatospora setae
           KM-6054]
          Length = 288

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 13/266 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+   PD   D R       A+ R  + E +  I G   F  + L
Sbjct: 26  DAEELAAHVHGVKRSQLHTVPDGDFDAR----YWEAVSRREQREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V+ A+           +  ++DL TG+GA+ LAL +E P     
Sbjct: 82  EVGPGVFVPRPETESVVEWAIDAVRAMDVAEPL--VVDLCTGSGAIALALAQELPRSTVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVI 179
             ++   AL   + N   +    R    Q D   +       +G FD+++SNPPYI    
Sbjct: 140 AFELDEGALAYTRRNVEASPDRARVHLHQGDATQAFADDRGWDGRFDLVISNPPYIPLTE 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP++SL  G DGL   R I    +R L   G   +E    Q   V  IF
Sbjct: 200 WEYVAPEARDHDPQMSLFSGEDGLDTIRGIERVAARLLRPGGAVVIEHADTQGGQVPWIF 259

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E          +D     R     R
Sbjct: 260 REEGGWTDAADHRDLNNRPRFTTARR 285


>gi|16080753|ref|NP_391581.1| glutamine methylase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311661|ref|ZP_03593508.1| hypothetical protein Bsubs1_20001 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315989|ref|ZP_03597794.1| hypothetical protein BsubsN3_19922 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320900|ref|ZP_03602194.1| hypothetical protein BsubsJ_19865 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325184|ref|ZP_03606478.1| hypothetical protein BsubsS_20026 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313250|ref|YP_004205537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus subtilis BSn5]
 gi|1170229|sp|P45873|HEMK_BACSU RecName: Full=Protein methyltransferase hemK homolog
 gi|853777|emb|CAA89885.1| ywkE [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636225|emb|CAB15717.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. subtilis str. 168]
 gi|291486284|dbj|BAI87359.1| hypothetical protein BSNT_05651 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320019524|gb|ADV94510.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bacillus subtilis BSn5]
          Length = 288

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 117/266 (43%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A R+   +   L   TG+   +++      + + + +     +    +   +  I+G  
Sbjct: 17  EAGREENAAELLLLYDTGMERSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        +   + ++D+GTG+GA+ + L  E
Sbjct: 77  FFYGREFMVNDDVLIPRPETEEVVFHLLEKYRSVFSEDGKLEVVDVGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
           +  F    VDIS +AL++A +NA   G + RF   Q D            D+IVSNPPYI
Sbjct: 137 NQSFSVSAVDISKEALQVASANAEKLGANVRF--YQGDLLEPFIKAGKKADIIVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + +   +        EIG+ Q   V
Sbjct: 195 SEEEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWKQGAAV 254

Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260
              I ++ K   V   KD  G DR +
Sbjct: 255 KDLILKAFKGAEVEVLKDINGKDRTI 280


>gi|240137463|ref|YP_002961934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens AM1]
 gi|240007431|gb|ACS38657.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens AM1]
          Length = 302

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/265 (37%), Positives = 141/265 (53%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L     L+   + +     L       L  A  R L  E + RILG  +F+
Sbjct: 35  NARSDARFLLQHTLSLTPLDLSLRGREPLGAAGAEALRQAAERRLAGEPVARILGAWEFW 94

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  +T  PRP+TE +V++AL       E+   +R++DLGTGTG + +ALL E P 
Sbjct: 95  GLPFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGTGCILVALLHERPG 151

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D S  AL IA+ NA  NGV++R   L   W  ++EG FD+IVSNPPYI + ++ 
Sbjct: 152 AVGIGLDRSAAALAIARRNAAANGVADRAAFLCGSWLDALEGPFDLIVSNPPYIAAPVIA 211

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238
            L  EVR  DP+ +LDGG DGL  YR I   V+R    L+  G   +EIGY+Q   + R+
Sbjct: 212 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 271

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
            +      +   +D  GNDRV+   
Sbjct: 272 AQEAGFEDIGFGRDLAGNDRVVTLR 296


>gi|73748900|ref|YP_308139.1| SAM-dependent methyltransferase HemK family protein
           [Dehalococcoides sp. CBDB1]
 gi|73660616|emb|CAI83223.1| SAM-dependent methyltransferase HemK family [Dehalococcoides sp.
           CBDB1]
          Length = 277

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 10/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  +S   L    G+S  Q+ ++ +  L   +       +   L+ E    I G ++FY
Sbjct: 21  EARLESEILLRHTLGISRVQLHLELERELKPEKETVYFETLQHRLEGEPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+G + + L  E   
Sbjct: 81  GRTFLVDKRVLIPRPETEHLIEKALQIAR----HYECPYIADIGTGSGVIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  ALE+A+ NA    + +R    Q D  SS+  + D++ +N PY+      
Sbjct: 137 AYVYATDISEDALEVARQNAEEYRLEKRLSFYQGDLLSSLPEMVDILAANLPYVPKAEAG 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L       +PR++LDGG DGL  YR +   +   L   G   +EIG +Q   + +  + 
Sbjct: 197 LLNG-----EPRLALDGGKDGLDLYRRLIPILPARLRPGGTALLEIGIHQSELLAKYIKD 251

Query: 242 -RKLFLVNAFKDYGGNDRVLLFC 263
                 +    DY G  R++   
Sbjct: 252 TLPQASLEIISDYAGIPRIVALT 274


>gi|293371695|ref|ZP_06618106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CMC 3f]
 gi|292633392|gb|EFF51962.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides ovatus SD CMC 3f]
          Length = 278

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGVAEFCGRNFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  +    D
Sbjct: 87  SGVLIPRPETAELVELIVE------ESPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N        RF  LQ D  S        FDVIVSNPPY+     + +  
Sbjct: 141 ISEEALAIARKNNDALEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  + 
Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR++   R
Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278


>gi|116330130|ref|YP_799848.1| methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
 gi|116123819|gb|ABJ75090.1| Methylase of polypeptide chain release factors [Leptospira
           borgpetersenii serovar Hardjo-bovis JB197]
          Length = 286

 Score =  246 bits (628), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 114/265 (43%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  L   ++ V+ + +L + ++      IV   K++    I G + FYN
Sbjct: 26  ARLDAEILLADLLNLQRVKLYVNFERLLTETEKNAYRERIVDRSKNKPTAYITGQKAFYN 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRPETE LV+  L   L          +LDL TG+G + ++L      +
Sbjct: 86  SVFFVNEKVLIPRPETEELVEKIL---LDFKGNNSEQNVLDLCTGSGCIGISLKSARKDW 142

Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                DIS  ALEIAK NA    G       L+S+ F S+  E  FD+IV+NPPYI    
Sbjct: 143 NITLSDISKDALEIAKKNAIQIIGEGNNIQFLESNLFLSIPKESEFDLIVTNPPYIPISD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  +V D++P ++L    D       + +    HL + G   +E   +     V   
Sbjct: 203 KTAMMKDVVDYEPHLALF-LEDPKEFLSKLIEDARIHLKEGGKFYMETYPSLAWTFVSES 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +         KD  G DR ++  +
Sbjct: 262 TTNGWKEGKVEKDLSGKDRFVVLTK 286


>gi|304438486|ref|ZP_07398426.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304368569|gb|EFM22254.1| protein-(glutamine-N5) methyltransferase [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 292

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 133/263 (50%), Gaps = 3/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L  V G     + V  D  L+  +     + +     H  I  ILG R+F  
Sbjct: 27  SRLDAEVLLAAVLGRDRMYLYVHFDEPLEPAELATFRSYVKERGAHVPIAYILGRREFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPF 121
           +   ++ DT  PRP+TE+L   A+     R E     +R  D+GTGTGA+ L++L  +  
Sbjct: 87  LAFRVTRDTLIPRPDTEILAQFAVDTLRARAEAGAGELRFADIGTGTGAIALSVLHHTEG 146

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   VDIS  A  +A  NA T G++ER + L  D  + + G  + +I+SNPPYI S  V
Sbjct: 147 TRADAVDISPAAAAVAAENAATLGLTERIEVLTGDLTAPLFGRSYAMILSNPPYIPSADV 206

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  +V+ ++P ++LDGG DGL+ YR +       L + G+ +VE+G ++  DV  +  
Sbjct: 207 KTLMEDVQAYEPHLALDGGADGLAVYRCLLRDAPDLLTEGGVLAVEVGVHEATDVAALMA 266

Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262
           +   +      +D  G +RV++ 
Sbjct: 267 AHPRIVRTKTLRDLAGIERVVVG 289


>gi|254447043|ref|ZP_05060510.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium HTCC5015]
 gi|198263182|gb|EDY87460.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium HTCC5015]
          Length = 285

 Score =  245 bits (627), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 74/249 (29%), Positives = 116/249 (46%), Gaps = 7/249 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +    G S  + I D D VL + Q+    + + R +   +    + G   F
Sbjct: 27  NAWDEAVWLVLHALGRSPAEPIEDADIVLSEDQQQAAFDWLQRRIDTRKPTAYLTGQAWF 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   ++ DT  PR     L+    +  LPR       R+LDL TG G + +A     P
Sbjct: 87  CGLPFEVTEDTLIPRSPIAELIQQQFSPWLPR----PPQRVLDLCTGGGCIAIACAYAFP 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG DIS  AL +A+ N   + +  R   L SD FS+VEG FD+IVSNPPY+++  +
Sbjct: 143 DAQVVGTDISEAALAVARRNVAAHQLQGRVQCLSSDVFSNVEGCFDLIVSNPPYVDAEDM 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P ++L    DGL   R I   V  +L+ DG+  +E+G N +  +V  + 
Sbjct: 203 AALPAEYR-HEPELALASERDGLGITRRILADVGNYLSDDGVLVLEVG-NSETALVEAYP 260

Query: 241 SRKLFLVNA 249
                 +  
Sbjct: 261 DLPFTWLEF 269


>gi|297568590|ref|YP_003689934.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurivibrio alkaliphilus AHT2]
 gi|296924505|gb|ADH85315.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurivibrio alkaliphilus AHT2]
          Length = 299

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L  V       +++  +  L +  R  L  A+ R    E +  I+G  +F+
Sbjct: 28  EAAIEADLLLGWVLNCDRAGLVLAAEQPLAEPLRQRLQAALKRRESREPLAYIMGEWEFW 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD---VVRILDLGTGTGAVCLALLKE 118
           ++   +      PRPETELLV+ ALAF              RILDLGTG+G + + L +E
Sbjct: 88  SLPFAVGPAVLIPRPETELLVEQALAFVRQLQRPPGGRYPWRILDLGTGSGILAVVLARE 147

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
               + V +D S  AL +A++NA  +GV+E+   + SDW S++     FD++V+NPPY+ 
Sbjct: 148 IASAQVVALDRSPAALAMARANARRHGVAEKITFVGSDWLSALAARPAFDLVVANPPYVC 207

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  L  EVR+ +P  +LDGG  GL   + I   +   L  DGL  +EIG++QK    
Sbjct: 208 RSAMLTLQPEVREHEPHTALDGGRQGLDDIKIICRDLPAVLRPDGLLLLEIGWDQKTAAA 267

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVL 260
            +F             D  G  RVL
Sbjct: 268 ELFNRNPAYRQTEIINDLAGLPRVL 292


>gi|323127209|gb|ADX24506.1| putative methyltransferase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 279

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS   ++  +  +       L    +   +H S   + G   F +++L++      PRP
Sbjct: 34  WSSLDFLLHQNQEVSSDDCLLLEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         + +LD+GTG+GA+ ++L KE P ++    DIS  AL +
Sbjct: 94  ETEELVDLILAEN-----PDTPLSVLDIGTGSGAIAISLKKERPAWQLTASDISSDALSL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA    +      + SD FS + G FD+IVSNPPYI     D +GL V   +P ++L
Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DG + YR I +  S +L++ G    EIGY Q   +  +  +      V   +D  G
Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNTHFPQKRVRVLRDVFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|297559305|ref|YP_003678279.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296843753|gb|ADH65773.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 287

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 10/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++    DS  D R        + R    E +  I G   F  
Sbjct: 23  PRADAEELAAFVHGVRRGELHTVADSDFDAR----YWECVSRREAREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++VD A+           +  ++DLGTG+GA+ +++ +E P  
Sbjct: 79  LELRVGPGVFVPRPETEIMVDWAIQTLRAMDVADPL--VVDLGTGSGAIAISIAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
           +   V++   AL  A+ N   +G ++R  +   D       + G  D+++SNPPY+ +  
Sbjct: 137 RVHTVEVDPDALAWARRNIDASGHADRVTSHHGDMRTALPQLNGRVDLLISNPPYVPTRE 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  EVRD+DP  +L  G DGL   R +     R L   G  +VE    Q +D+  +F
Sbjct: 197 AGAIPPEVRDYDPAPALWSGEDGLDMIRALEAVGRRLLRPGGAMAVEHHDGQGIDIPWLF 256

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R    V   KD    DR ++  R
Sbjct: 257 PEDRGWRDVLNRKDLARRDRFVVMRR 282


>gi|307942490|ref|ZP_07657839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseibium sp. TrichSKD4]
 gi|307774311|gb|EFO33523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Roseibium sp. TrichSKD4]
          Length = 280

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 134/261 (51%), Gaps = 4/261 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +  +  L    +++  D ++   +   + +A  +  +   + RILG R+FY 
Sbjct: 22  ADLDARHLVSGLLDLHPSDLVLREDDLVSTDKIKVILDAQEQRQRGVPVGRILGVREFYG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   L++DT EPRP+TE+LVD+ L  +          R LD+GTGTGA+ +AL   S   
Sbjct: 82  LEFQLNADTLEPRPDTEILVDTVLNIA----PTDTAWRFLDVGTGTGAIAIALAANSALA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G   DIS  AL  AK+NA  NGV  R   ++  + +   G FD IVSNPPYI S +V  
Sbjct: 138 EGAASDISEHALLAAKANAAMNGVEGRLSFVRGSYLAPFSGQFDWIVSNPPYIASDVVRQ 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   VR +DP  +LDGG DGL  YR +       L   G  ++EIG++Q   V  +    
Sbjct: 198 LDTGVRAYDPLRALDGGADGLDAYRQLIPSAKELLAPSGHLALEIGFDQGKSVSSLCTDH 257

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   KD  G DRV+L  
Sbjct: 258 GYCGVEIIKDLAGQDRVVLAA 278


>gi|89095601|ref|ZP_01168495.1| modification methylase, HemK family protein [Bacillus sp. NRRL
           B-14911]
 gi|89089347|gb|EAR68454.1| modification methylase, HemK family protein [Bacillus sp. NRRL
           B-14911]
          Length = 292

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 9/267 (3%)

Query: 3   ALRDS---HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           A RDS      L     +S  +++ +    LD R +     A+        +  I+G  +
Sbjct: 22  AGRDSNAGEILLGHFLNMSRSRLLAEMREELDTRMQGAFKEAVQLHADGRPVQYIIGKEE 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     ++ +   PRPETE LV  AL        +       D+GTG+GA+ + L  ES
Sbjct: 82  FYGRTFLVNENVLIPRPETEELVLEALKRKEKLFGREAASAAADIGTGSGAIAVTLKLES 141

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIE 176
           P  +    D+   +L+ AK NA  NG     + +  D           FD+I+SNPPYI 
Sbjct: 142 PDLQVTATDVYGPSLDTAKENADKNGAE--IEFILGDLLQPFIEESRKFDIIISNPPYIP 199

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              ++ +   V + +P  +L  G DGL  YR   + +   L +  L   E+G  Q   V 
Sbjct: 200 LSDMEGMSEVVTENEPHRALFAGQDGLDLYRRFMEELPLVLKEKSLVGFEVGAGQSKAVS 259

Query: 237 RIFESR-KLFLVNAFKDYGGNDRVLLF 262
            +  +      ++   D  G DR++  
Sbjct: 260 ELLRTAFPDANIDIVYDINGKDRMVFA 286


>gi|300871385|ref|YP_003786258.1| protein methyltransferase [Brachyspira pilosicoli 95/1000]
 gi|300689086|gb|ADK31757.1| protein methyltransferase [Brachyspira pilosicoli 95/1000]
          Length = 288

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 130/262 (49%), Gaps = 11/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +S + L  V  ++  ++I D    L  ++   +   I R L +E I  I+  ++FY    
Sbjct: 27  ESQTILMHVLNINKMKLISDSLRELTQKEVNNIEELINRRLNYEPISYIINKKEFYGFNF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESPF 121
            + ++   PRPETE L+D  L +    ++ ++ + I D+G G+G + + L K    ++  
Sbjct: 87  YVDNNVLIPRPETEELIDLVLDY----MKDKNNISICDIGGGSGNIAITLKKLFLEQNKN 142

Query: 122 FKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                ++IS  A ++ K NA+   G  +  + + +D  + + E  +DVIVSN PY+    
Sbjct: 143 IDITAIEISEGAFQVIKKNALNILGDEKLINIVNTDALTFIPENKYDVIVSNAPYVPLRD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  +  +F+P+ +L  G DGL  Y+     + ++L  +G+   EI Y+Q   ++ I 
Sbjct: 203 KDSLQKD-LEFEPQNALYSGYDGLDFYKAFLSIIKKYLKDNGVFFFEISYDQGEALINIC 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            S  +  V   KD  G DR L+
Sbjct: 262 NSLNIKNVLVKKDLNGKDRFLV 283


>gi|146296535|ref|YP_001180306.1| HemK family modification methylase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410111|gb|ABP67115.1| modification methylase, HemK family [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 289

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 8/262 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
            R +   + ++  +   Q I++ +  +++     + +A  +      +        F  +
Sbjct: 32  KRIAILLVSQILNIDKSQAILEKNLTIEEEDYQRIISAAKKYTMDFPLQYCTNKAYFMGL 91

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +  D   PR +TE L++ A+        +++ +  LD+GTG+G + +AL K     K
Sbjct: 92  EFYVDEDVLIPRFDTETLIEVAIEL----FNRKENLNFLDVGTGSGCIAIALCKFL-DCK 146

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVD 181
            + VDIS  AL +A+ NA  NGV ++   ++S+ F ++     FD I SNPPYI    + 
Sbjct: 147 VIAVDISENALRVAEKNAKLNGVFDKIHFVKSNLFENIPPSLKFDAIFSNPPYISENEIS 206

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V   +P+ +L    +GL +++ IA    ++L K G    E+GY Q   V +I + 
Sbjct: 207 MLDKRVLK-EPKQALFSKENGLYYFQEIAKNARQYLKKGGYIIFEVGYRQSQHVKKILKD 265

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                + +  D    +R +   
Sbjct: 266 LGYVDIKSKNDLNNIERCVYAT 287


>gi|84516321|ref|ZP_01003681.1| modification methylase, HemK family [Loktanella vestfoldensis
           SKA53]
 gi|84510017|gb|EAQ06474.1| modification methylase, HemK family [Loktanella vestfoldensis
           SKA53]
          Length = 277

 Score =  245 bits (627), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 92/257 (35%), Positives = 128/257 (49%), Gaps = 25/257 (9%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               +S      VTG S+H                     + R      +  +LG+RDFY
Sbjct: 35  DPGHESRLIWAHVTGDSAH-----------------FAALVARRAARAPLSHLLGYRDFY 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + R  ++ D  +PRP+TE +V +ALA             +LDLGTG+G + L+LL   P 
Sbjct: 78  DHRFIVTPDVLDPRPDTEAIVTAALA--------DPFAHVLDLGTGSGCILLSLLAARPQ 129

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+GVD+S  AL +A  N    G+ +R   ++SDWF++V G FD+IVSNPPYI +  + 
Sbjct: 130 ATGLGVDLSDAALAVAAQNRSALGLDQRATLVRSDWFTAVTGSFDLIVSNPPYIAATEMA 189

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +P ++L  G DGLS+YR IA G   HL   G   VEIG  Q  DV  +  +
Sbjct: 190 GLQPEVRLHEPHLALTDGADGLSYYRIIAAGAGAHLAPGGRLIVEIGPTQASDVSALLRA 249

Query: 242 RKLFLVNAFKDYGGNDR 258
                +    D  G DR
Sbjct: 250 AGFTDLRVIPDLDGRDR 266


>gi|296331339|ref|ZP_06873811.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305676325|ref|YP_003867997.1| glutamine methylase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296151454|gb|EFG92331.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414569|gb|ADM39688.1| glutamine methylase of release factor 1 (and perhaps others) at a
           GGQ site [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 288

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 9/266 (3%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A R+   +   L   TG+   +++      + + + +     +    +   +  I+G  
Sbjct: 17  EAGREENAAELLLLYDTGMDRSKLLASLQEPIGEDELYRFKRHVEMHKEGVPVQYIIGKE 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE +V   L        +   + ++D+GTG+GA+ + L  E
Sbjct: 77  FFYGREFMVNDDVLIPRPETEEVVYHLLEKYRHVFSEDSRLEVVDVGTGSGAIAVTLALE 136

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
           +  F    VDIS +AL++A +NA T G        Q D            D++VSNPPYI
Sbjct: 137 NKNFSVSAVDISKEALQVASANAETLGAD--VHFYQGDLLEPFIKEGKKADIVVSNPPYI 194

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +  L   VR  +P  +L  G DGL  Y+   + +   +        EIG+ Q   V
Sbjct: 195 SEGEMADLSEIVRFHEPLHALTDGGDGLKFYKRFMEDIPLVMKDKVFVVFEIGWQQGAAV 254

Query: 236 VR-IFESRKLFLVNAFKDYGGNDRVL 260
              I ++ K   V   KD  G DR +
Sbjct: 255 KELILKTFKGAEVEVLKDINGKDRTI 280


>gi|260172133|ref|ZP_05758545.1| putative protoporphyrinogen oxidase [Bacteroides sp. D2]
 gi|315920442|ref|ZP_07916682.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694317|gb|EFS31152.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 278

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F      ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRNFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PRPET  LV+  +       E  +   +LD+GTG+G + ++L K+ P       D
Sbjct: 87  SGVLIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N        RF  LQ D  S        FDVIVSNPPY+     + +  
Sbjct: 141 ISEEALAIARKNNEDLEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  + 
Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSDLLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR++   R
Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278


>gi|270308381|ref|YP_003330439.1| modification methylase, HemK family [Dehalococcoides sp. VS]
 gi|270154273|gb|ACZ62111.1| modification methylase, HemK family [Dehalococcoides sp. VS]
          Length = 277

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 10/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L    G+S  Q+ ++ +  L   +       +   L+      I G ++FY
Sbjct: 21  EARLEAEILLRHTLGISRVQLHLELERELHPNKETAYFQTLKHRLEGVPSAYITGEKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+GA+ + L  E   
Sbjct: 81  GRTFQVDKRVLIPRPETEHLIEKALRIARS----YESPYIADIGTGSGAIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS +ALEIA++NA    + +R    + D   S+  + D++ +N PY+ +    
Sbjct: 137 AYVYATDISAEALEIARNNAAEYRLGKRLTFYRGDLLESLPEMVDILTANLPYVPTTETK 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L       +P ++LDGG DGL  YR +   +   L   G   +EIG +Q   + +  + 
Sbjct: 197 LLKG-----EPLLALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLAKYIKE 251

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
                 V    DY G  RV+
Sbjct: 252 YLPQAAVEISPDYAGIPRVV 271


>gi|300702901|ref|YP_003744502.1| n5-glutamine methyltransferase, modifies release factors rf-1 and
           rf-2 [Ralstonia solanacearum CFBP2957]
 gi|299070563|emb|CBJ41858.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Ralstonia solanacearum CFBP2957]
          Length = 281

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 121/267 (45%), Gaps = 11/267 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+ 
Sbjct: 14  PALEARMLVSHVTGLSRVQLITQDTYAIDNGVRTRLAELATRRLAGEPMAYLLGEREFFG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL     RIE RD   +LDLGTG+G + + +       
Sbjct: 74  RLFQVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRDA 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA   G +        DW+ ++        FD+IVSNPPYI S
Sbjct: 130 RVWATDASADALAVAAGNAQALGAA-NVHVAHGDWYGALPESDAPPAFDLIVSNPPYIAS 188

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  
Sbjct: 189 ADAHLGQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 247

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +        V   +D  G+DR     R
Sbjct: 248 LLAEAGFADVFTARDLAGHDRCSGGRR 274


>gi|224025263|ref|ZP_03643629.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM
           18228]
 gi|224018499|gb|EEF76497.1| hypothetical protein BACCOPRO_02000 [Bacteroides coprophilus DSM
           18228]
          Length = 279

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 115/264 (43%), Gaps = 6/264 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  +    +  +    D+     +R  L N + R   +E +  I+G   F 
Sbjct: 20  EAAAMARWILTDLFHFGTLDLYAGKDTDFPTDERARLNNILTRLKSYEPLQYIIGETRFS 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PRPETE LV   +            VRILD+GTG+G + ++L    P 
Sbjct: 80  GLPFEVTPSVLIPRPETEELVSWIVEDH-----PDVPVRILDIGTGSGCIPVSLAHRLPL 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 D+S +ALE+A+ NA+ NGV+  F  + +   S      DV+VSNPPYI      
Sbjct: 135 STVHAWDVSPEALEVARRNAIRNGVTVHFQQVDALQESWPSLNIDVLVSNPPYITEKERT 194

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P ++L     D L  YR IA      L+  G    EI      + V + +
Sbjct: 195 DMERNVLDWEPELALFVPDNDPLLFYRHIARIGLDLLSPSGTLYYEINRAYGAETVSLLQ 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 V   KD  GNDR++   +
Sbjct: 255 QLGYHSVELRKDLSGNDRMVKAVK 278


>gi|163850387|ref|YP_001638430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens PA1]
 gi|163661992|gb|ABY29359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens PA1]
          Length = 296

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  +  L+   + +     L       +  A  R L  E + RILG  +F+
Sbjct: 29  NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEAIRQAAERRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  +T  PRP+TE +V++AL       E+   +R++DLGTG+G + +ALL E P 
Sbjct: 89  GLPFALGPETLVPRPDTESVVETALRLL---PEREQPLRLIDLGTGSGCILVALLHERPG 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D S  AL +A+ NA  NGV++R   L   W  +++G FD+IVSNPPYI + ++ 
Sbjct: 146 ALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLDALKGPFDLIVSNPPYIAAPVIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238
            L  EVR  DP+ +LDGG DGL  YR I   V+R    L+  G   +EIGY+Q   + R+
Sbjct: 206 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 265

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
            +      +   +D  GNDRV+   
Sbjct: 266 AQEAGFEDIGVGRDLAGNDRVVTLR 290


>gi|256839099|ref|ZP_05544609.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parabacteroides sp. D13]
 gi|256740018|gb|EEU53342.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parabacteroides sp. D13]
          Length = 318

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 46/300 (15%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       + RV GLS+HQ+++     L D ++F +   +     ++ I  +LG  DFY
Sbjct: 20  EAQALVRLIMERVCGLSTHQLLLGKGKELSDTEKFKIKEIVEGLRLYKPIQYLLGIADFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ D   PRPET  LV+  +        +    RILD+GTG+G + ++L K  P 
Sbjct: 80  GMEFKVTPDVLIPRPETAELVERIITDY-----QGQAPRILDIGTGSGCIAISLAKHLPK 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE---------------------------RFDTLQ 154
            +   VDIS +AL +A+ NA  N VS                            RF   +
Sbjct: 135 AEVAAVDISPEALAMAEENARMNQVSVSFHELDILSEGYSSFMQEKQNFHVRETRFSCTR 194

Query: 155 SDWF-------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGI 200
           +  F             +S+ G  + IVSNPPYI       +   V + +P ++L     
Sbjct: 195 NKIFTYVKLKSHTEETEASLIGNLNCIVSNPPYIMYREKATMEANVLENEPHLALFVPDD 254

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D L  YR IA    RHL + G    EI      + V +        V   +D  G DR++
Sbjct: 255 DPLLFYRAIARFGQRHLVEGGHLYFEINALCGKETVAMLRQENYTEVELIQDLYGKDRIV 314


>gi|254559641|ref|YP_003066736.1| protein-( glutamine-N5) methyltransferase [Methylobacterium
           extorquens DM4]
 gi|254266919|emb|CAX22718.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium extorquens DM4]
          Length = 302

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  +  L+   + +     L       L  A  R L  E + RILG  +F+
Sbjct: 35  NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEALRQAAERRLAGEPVARILGAWEFW 94

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  +T  PRP+TE +V++AL       E+   +R++DLGTG+G + +ALL E P 
Sbjct: 95  GLSFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGSGCILVALLHERPG 151

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D S  AL IA+ NA  NGV++R   L   W +++EG FD+IVSNPPYI + ++ 
Sbjct: 152 ALGIGLDRSAAALAIARRNAAANGVADRAAFLCGSWLNALEGPFDLIVSNPPYIAAPVIA 211

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238
            L  EVR  DP+ +LDGG DGL  YR I   V+R    L+  G   +EIGY+Q   + R+
Sbjct: 212 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSAQGALVLEIGYDQANALTRL 271

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
            +      +   +D  GNDRV+   
Sbjct: 272 AQEAGFEDIGVGQDLAGNDRVVTLR 296


>gi|298482443|ref|ZP_07000629.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. D22]
 gi|295088114|emb|CBK69637.1| HemK family putative methylases [Bacteroides xylanisolvens XB1A]
 gi|298271422|gb|EFI12997.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. D22]
          Length = 278

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G  +F      ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIHGIAEFCGRNFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PRPET  LV+  +       E  +  R+LD+GTG+G + ++L K+ P  K    D
Sbjct: 87  SGVLIPRPETAELVELIVE------ENPNARRLLDIGTGSGCIAISLDKKLPDAKVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N     +  R   LQ D  +        FDVIVSNPPY+     + +  
Sbjct: 141 ISEEALAIARKNNDA--LEARVRFLQRDVLADDWEKIPSFDVIVSNPPYVTETEKNEMDA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V +++P ++L     D L  Y  IA   S  L   G    EI      +   I E  + 
Sbjct: 199 NVLEWEPGLALFVPDEDPLRFYNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   +D  G DR++   R
Sbjct: 259 RDVRVIRDIFGKDRIVTANR 278


>gi|119509583|ref|ZP_01628730.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414]
 gi|119465772|gb|EAW46662.1| protoporphyrinogen oxidase [Nodularia spumigena CCY9414]
          Length = 304

 Score =  245 bits (626), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 112/265 (42%), Gaps = 11/265 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQ----RFFLTNAIVRSLK-HESIHRILGWRDFYNV 63
             L  V GL    + ++      + Q       L     R L     +  I G   +   
Sbjct: 37  WLLLEVAGLDRLALRLESFKESPEIQMALPLEDLEQLWQRRLNERLPVQYITGVTPWRQF 96

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPF 121
           ++ +S+    PRPETE L+D A+A +         +     DLGTG+GA+ L L    P 
Sbjct: 97  KIAVSNAVLIPRPETEYLIDLAVAAATKSGAAPFLNSGHWADLGTGSGAIALGLADAFPK 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
                VD S +AL+IA+ NA   G   +    Q  W+  +   +G F  +VSNPPYI + 
Sbjct: 157 ATIHAVDYSPEALKIARDNARNLGFDNQIKFYQGSWWEPLAALKGEFSGMVSNPPYIPTS 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V  L  EV   +P ++LDGG DGL   R + +    +L   G+  +E+   Q   V  +
Sbjct: 217 TVATLQPEVVKHEPHLALDGGSDGLDCIRQLIEISPGYLRPGGVWLIEMMAGQADTVRTL 276

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262
              +     +    D  G +R  + 
Sbjct: 277 LAKQGSYCNIQIHADLAGIERFAIA 301


>gi|223983552|ref|ZP_03633735.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM
           12042]
 gi|223964480|gb|EEF68809.1| hypothetical protein HOLDEFILI_01016 [Holdemania filiformis DSM
           12042]
          Length = 284

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 8/259 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  FL  ++   S+ + +  +              + R LK E +  +LG+  FY  R  
Sbjct: 25  AQVFLLELSQKESYDLYLHYEDEAPAELVEQYQAGMKRILKQEPMQYVLGYSWFYGYRFQ 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ +   PRPETE LV + LA       +   +  +D+GTG+GA+ L+L KE P  +   
Sbjct: 85  VNENVLIPRPETEELVANILADLDEYFAEAKTIDAVDIGTGSGAIALSLAKEEPKIRMSA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS +A+E+AK+NA + GV      L  D    V       D+++ NPPYI       L
Sbjct: 145 TDISAEAVEVAKANAASLGVD--VKFLVGDMAQPVIDAGMKVDLLICNPPYIPQEE--TL 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V+D++P ++L GG DGL  YR +     + L    + + EIG+NQK  ++       
Sbjct: 201 EASVKDYEPHVALFGGEDGLKFYRQVFAAAPQVLKDKAMMAFEIGWNQKAALLAEVRKTF 260

Query: 243 KLFLVNAFKDYGGNDRVLL 261
                   KD  G DR+L 
Sbjct: 261 GDVRAEVVKDINGKDRMLF 279


>gi|322389536|ref|ZP_08063087.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           parasanguinis ATCC 903]
 gi|321143811|gb|EFX39238.1| protein-(glutamine-N5) methyltransferase [Streptococcus
           parasanguinis ATCC 903]
          Length = 278

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 11/260 (4%)

Query: 6   DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ S     R     +    ++     ++   +  L +   +   H     I+G  +F  
Sbjct: 20  EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLLSIFEQLKHHVPAQYIIGSAEFCG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T+      PRPETE LV   L  +         +R+LD+GTG+GA+ ++L    P +
Sbjct: 80  HVFTVDERVLIPRPETEELVALILEEN-----DEKALRVLDIGTGSGAIAISLALARPTW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D+S +AL +A+ NA     +   +   SD    +EG +D+IVSNPPYI    V+ 
Sbjct: 135 QVQASDVSEEALALAQENAKQLEAA--LEFKSSDVLDELEGPYDLIVSNPPYISRDDVEE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +G  V   +P ++L    DG + Y  IA      L  DG   +EIGY Q   V  +F+  
Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTPDGKIYLEIGYKQGAKVKELFQEA 252

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 FPDKRVRVLKDQFGQDRMVV 272


>gi|117617744|ref|YP_857648.1| protein methyltransferase HemK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559151|gb|ABK36099.1| protein methyltransferase HemK [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 282

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ + LC +       ++  P+  LD  Q   L   + R L  E I  ++G R+F++
Sbjct: 20  PRADADALLCHLLECRRSYLMTWPERELDAAQLATLQGWLERRLNGEPIAHLIGEREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE+LV+ AL              +LDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLKVSPATLIPRPDTEVLVEQALGRL-----PAGPCAVLDLGTGTGAIALALKSERPDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYI 175
               VD    A  +A++N+   G+    +     WF  +          F +IVSNPPYI
Sbjct: 135 DVWAVDRMPAAAALARANSAALGLP--IEVRDGSWFEPLVEPSSSKAPRFAMIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +         +VR F+PR +L     GL+  R I  G   HL   G   +E G+ Q   V
Sbjct: 193 DGADPHLDEGDVR-FEPRSALVADEQGLADIRLIVAGAPAHLLPGGWLLLEHGWQQGEAV 251

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            ++   +    V   +DYG N+RV L  
Sbjct: 252 RQLLLQQGYLQVETVRDYGDNERVTLGR 279


>gi|45656171|ref|YP_000257.1| protoporphyrinogen oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599405|gb|AAS68894.1| protoporphyrinogen oxidase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 286

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  L   ++ V+ + +L++ ++      I+   K++    I   + FYN
Sbjct: 26  ARLDAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYN 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ +   PRPETE LV+  L+     I +++   +LDL TG+G + ++L      +
Sbjct: 86  SIFFVNENVLIPRPETEELVEKVLSDFKGNIGEQN---VLDLCTGSGCIGISLKLARKDW 142

Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                DIS +ALE+A  NA    G  +    L+SD F S+  E  F++IV+NPPYI    
Sbjct: 143 NITLSDISKEALEVAAKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  +V D++P ++L    +      T+       L + G   +EI  +    ++   
Sbjct: 203 KAEMMKDVIDYEPHLALF-LENPKDFLSTLIAQAHERLVEGGKLYMEILPSLSETIISDS 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++        KD  G +R ++  R
Sbjct: 262 IAKGWENGKIEKDLSGKERFVILTR 286


>gi|189464286|ref|ZP_03013071.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM
           17393]
 gi|189438076|gb|EDV07061.1| hypothetical protein BACINT_00627 [Bacteroides intestinalis DSM
           17393]
          Length = 278

 Score =  245 bits (625), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 115/267 (43%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G S     +  D  L  +    L + + R    E I  ILG   F 
Sbjct: 20  EAGNLSRLICCEILGQSVVDYYLGKDITLSAKAEQELQSLLRRLRNFEPIQYILGEARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++S    PRPETE LV+  L       E     R+LD+GTG+G +   L KE P 
Sbjct: 80  GRTFQVASGVLIPRPETEELVEIMLK------EISSTSRVLDIGTGSGCIAATLAKELPG 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178
            +    D+S +AL IA +N++   V   F+  Q D  + + G    +DVIVSNPPY+   
Sbjct: 134 AQVTAWDVSEEALAIAAANSLALQVPVCFE--QRDVLTYIPGVTERYDVIVSNPPYVTEA 191

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P ++L     D L  YR I+      L  DG    EI      D+V 
Sbjct: 192 EKQDMERNVLDWEPSLALFVPDADPLRFYRRISVLGLEILEPDGKLYFEINRTFGEDIVL 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +        V   KD   NDR ++  +
Sbjct: 252 MMRELGYRFVRLQKDISHNDRFVIAQK 278


>gi|83747501|ref|ZP_00944539.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia
           solanacearum UW551]
 gi|207744460|ref|YP_002260852.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum IPO1609]
 gi|83725815|gb|EAP72955.1| Peptide release factor-glutamine N5-methyltransferase [Ralstonia
           solanacearum UW551]
 gi|206595866|emb|CAQ62793.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum IPO1609]
          Length = 309

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 121/267 (45%), Gaps = 11/267 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+ 
Sbjct: 42  PALEARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFG 101

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL     RIE RD   +LDLGTG+G + + +       
Sbjct: 102 RLFQVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTIALARRDA 157

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA T   +        DW+ ++        FD+IVSNPPYI S
Sbjct: 158 RVWATDASADALAVAAGNAQTLDAA-NVHVALGDWYGALPESDAPPAFDLIVSNPPYIAS 216

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                   ++R F+P  +L    DGL H RTI  G    L  DG   +E GY+Q   V  
Sbjct: 217 ADAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADGWLLLEHGYDQGPAVRA 275

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +        V   +D  G+DR     R
Sbjct: 276 LLAEAGFADVFTAQDLAGHDRCSGGRR 302


>gi|124265715|ref|YP_001019719.1| hemK protein [Methylibium petroleiphilum PM1]
 gi|124258490|gb|ABM93484.1| hemK protein [Methylibium petroleiphilum PM1]
          Length = 275

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 77/257 (29%), Positives = 115/257 (44%), Gaps = 10/257 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D+   L  V       ++   D  LD +        + R    E +  +LG ++F+ +
Sbjct: 21  RLDAQCLLSAVLARPRSWLLAHADEALDPQAARHYDALLARRAAGEPLAYVLGEKEFFGL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL ++ D   PR +TE LV+ AL      +E      + DLGTG+GA+ LAL    P  +
Sbjct: 81  RLEVTPDVLIPRADTETLVEWALELLPCNVE----TAVADLGTGSGAIALALAARRPTCR 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              VD S  AL +A+ N    G++   +   SDWFS++EG  F +IVSNPPYI       
Sbjct: 137 VTAVDASSDALAVAERNGGRLGLA--VEWRLSDWFSALEGRRFALIVSNPPYIADGDCHL 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              +    +P+ +L  G DGL+  R I    +  L   G   +E GY+Q   V  +    
Sbjct: 195 ---DALTHEPQRALTSGPDGLAAIRHIVASAASFLTAGGWLLIEHGYDQAEAVQALLGVA 251

Query: 243 KLFLVNAFKDYGGNDRV 259
               +    D GG  R 
Sbjct: 252 GFEHIATRHDLGGQPRC 268


>gi|88810846|ref|ZP_01126103.1| HemK protein [Nitrococcus mobilis Nb-231]
 gi|88792476|gb|EAR23586.1| HemK protein [Nitrococcus mobilis Nb-231]
          Length = 283

 Score =  244 bits (624), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 7/260 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  +  +    ++  P+  L           + R      +  + G R+F+
Sbjct: 24  NARLDAEVLLAGLLAVERSYLLTWPERRLPPAVLARYRAQVARRASGYPVAYLTGIREFW 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L ++  T  PRPETE LV+ ALA     +       +LDLGTG+GAV LA+  E P 
Sbjct: 84  SLELRVTPATLIPRPETEGLVEVALA----SLTGITQPMVLDLGTGSGAVGLAIATERPD 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
              V VD   +AL +A+ NA   G+  R   L  DW     E  F +IV+NPPY++    
Sbjct: 140 ATVVAVDTCPRALAVARCNARRLGLQ-RVQFLLGDWLEPAGERRFHLIVANPPYVDPAEP 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +     +R F+P  +L     GL+  R I  G   +L+  G+ +VE GY Q   V  +F+
Sbjct: 199 ELRCASLR-FEPPTALLAPEQGLAELRRIVSGALTNLHHGGVLAVEHGYRQGAAVRTLFQ 257

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     ++   D  G+ RV 
Sbjct: 258 TAGFEEIHTELDLQGHPRVT 277


>gi|170759851|ref|YP_001785467.1| HemK family modification methylase [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169406840|gb|ACA55251.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 283

 Score =  244 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIEKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI+  +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIKEDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPLEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGRDRVIKARK 282


>gi|269123394|ref|YP_003305971.1| modification methylase, HemK family [Streptobacillus moniliformis
           DSM 12112]
 gi|268314720|gb|ACZ01094.1| modification methylase, HemK family [Streptobacillus moniliformis
           DSM 12112]
          Length = 359

 Score =  244 bits (624), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 7/258 (2%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTL 67
                +  +    +     + + + Q+  L + + + + K   I  I   + FY     +
Sbjct: 104 IIFSNLLNIDMSLLFTKYSNSITEDQKNRLRDILKKIVDKKIPIQYIFNEQVFYGYSFYV 163

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             +   PR +TE +V+ AL      I K +  ++LD+GTG+GA+ L +  E+   K +  
Sbjct: 164 DKNVLIPRIDTEFVVEKALEL----INKINNPKVLDIGTGSGAIALVIGLENRESKILAT 219

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL+IAK N+    V E    L SD FS V    FD+IVSNPPYI    +  +G  
Sbjct: 220 DISENALKIAKKNSEILNV-ENVKFLHSDLFSEVSYKEFDLIVSNPPYISRDEIGIMGEN 278

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V   +P+ +L     GL  Y  I+     HL  DG    EIGY+Q   V  I E+     
Sbjct: 279 VLLHEPQNALFAEDGGLYFYFEISKNAKNHLKNDGYLLFEIGYSQGNKVKDIMENMGYID 338

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V+  KD  GN+R +   +
Sbjct: 339 VSIGKDLTGNERYVFGRK 356


>gi|160885547|ref|ZP_02066550.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
 gi|299147399|ref|ZP_07040464.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_23]
 gi|156109169|gb|EDO10914.1| hypothetical protein BACOVA_03547 [Bacteroides ovatus ATCC 8483]
 gi|298514677|gb|EFI38561.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides sp. 3_1_23]
          Length = 278

 Score =  244 bits (624), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 116/260 (44%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F      ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFSGRNFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PRPET  LV+  +       E  +   +LD+GTG+G + ++L K+ P       D
Sbjct: 87  SGVLIPRPETAELVELIVK------ENPNARHLLDIGTGSGCIAISLDKKLPDVDVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGL 185
           IS +AL IA+ N        RF  LQ D  S        FDVIVSNPPY+     + +  
Sbjct: 141 ISEEALAIARKNNEDLEAGVRF--LQRDVLSDDWEKVPSFDVIVSNPPYVTETEKNEMDA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  Y  IA   S  L   G    EI      +   I E  + 
Sbjct: 199 NVLDWEPGLALFVPDEDPLRFYNRIACLGSELLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR++   R
Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278


>gi|116333898|ref|YP_795425.1| methylase of polypeptide chain release factor [Lactobacillus brevis
           ATCC 367]
 gi|116099245|gb|ABJ64394.1| Methylase of polypeptide chain release factor [Lactobacillus brevis
           ATCC 367]
          Length = 283

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 9/257 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +         +++      L   Q       + R    E    +LG+  FY     
Sbjct: 27  AQYLMLEGNQWRFTELVQHYREALSPTQTQAFQAQLARVCAGEPAQYVLGYAPFYGREFQ 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PRPETE LV+  L     ++ ++   +++D+GTG+GA+ + L KE P +    
Sbjct: 87  VTPATLIPRPETEELVEWVL-----QVVRQPAAKVIDVGTGSGAIAVTLKKERPMWLVTA 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            DIS  A+ +A+ NA    ++ +      D  + V G  FDVIVSNPPYI+   +  +  
Sbjct: 142 TDISDAAIAVAQKNAQR--LTAQLMWATGDLLAPVTGQRFDVIVSNPPYIDRTEMPEMDT 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V+ ++P  +L     GL+ Y+  A  ++ +L   G    EIGY+Q   V +IF+     
Sbjct: 200 SVKRYEPEQALYAADHGLAFYQRFAQVLTTYLVPTGDFFAEIGYHQGAAVKQIFKQALPD 259

Query: 245 FLVNAFKDYGGNDRVLL 261
             V    D  G+DR++ 
Sbjct: 260 AQVTVKSDINGHDRMIH 276


>gi|258512738|ref|YP_003186172.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257479464|gb|ACV59783.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 313

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 10/269 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   +    G    +++      + D             ++ E +  +LG +DFY 
Sbjct: 37  AEREAEQIVAHALGWDRVKLLQSLGDEVPDEIAERAARLAALRVQGEPLAYVLGKQDFYG 96

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +  D   PRP+TE+LV+ A+ F           R++D+GTG+G + +++    P  
Sbjct: 97  RTFEVGPDCLIPRPDTEVLVEEAIRFLK---RMPSGTRVIDVGTGSGCIAVSIALACPGV 153

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
               VD+S  AL +A+ NA   G    +   D ++     +  G  +  IVSNPPYI + 
Sbjct: 154 SVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTG 213

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKVDVVR 237
            +D L   VRD++PR++LDGG DGL  YR +A      L +      +E+G+NQ  +V R
Sbjct: 214 EIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVAR 273

Query: 238 IFE--SRKLFLVNAFKDYGGNDRVLLFCR 264
           +F     + F V   KD  G DRV+   R
Sbjct: 274 LFAPWRERGFRVRKVKDLRGIDRVIAVTR 302


>gi|297531577|ref|YP_003672852.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. C56-T3]
 gi|297254829|gb|ADI28275.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geobacillus sp. C56-T3]
          Length = 293

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 108/265 (40%), Gaps = 7/265 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC   G+    +       +D+         + R    H  I  ++G+  FY  
Sbjct: 24  RAAEWLLCHHLGVDRAGLFARWREPVDEAVYERFAADVRRHAVDHVPIQYLIGYESFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETE LV   L         R  + ++D+GTG+GA+ + L  E+    
Sbjct: 84  PFLVNRHVLIPRPETEELVLGVLKRVPRLFAGRKRIDVVDVGTGSGAIAVTLALENKALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
               DIS  AL +A+ NA   G       L  D    +       DV+VSNPPYI     
Sbjct: 144 VTATDISEAALAVARENARRLGA--NVSFLCGDLLQPIMAMGWTVDVVVSNPPYIPETDA 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V++++P  +L GG DGL  YR  A  +   L    L + E+G  Q   V  +  
Sbjct: 202 AMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAPALAAFEVGAGQGEAVAALLA 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
           +      V    D  G DR++   R
Sbjct: 262 AAFPEAEVEVDFDLNGKDRMVYMTR 286


>gi|293375559|ref|ZP_06621833.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sanguinis PC909]
 gi|325836756|ref|ZP_08166223.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sp. HGF1]
 gi|292645776|gb|EFF63812.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sanguinis PC909]
 gi|325491134|gb|EGC93423.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Turicibacter sp. HGF1]
          Length = 283

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 10/260 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLT 66
              L  VTG  S++++ D +  +   Q      ++   + ++  +  I+G+  F+  +  
Sbjct: 26  KLLLMHVTGKESYEILADMNMEVPQEQVEEFERSVKTYVEQNIPVQHIMGYETFFGHKFI 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PR ETE LV + L+ +   +     V+++D+GTG+GA+ + L  E P  +   
Sbjct: 86  VNDDVLIPRFETEELVANVLS-TYDDVFDGAAVKLVDVGTGSGAIGVTLAVEEPNMEVTV 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            ++S  ALE+AK NA   G        Q D    +      FD++VSNPPYI   + + +
Sbjct: 145 TELSEAALEVAKKNAANLGA--NVTFYQGDMLQPLIERGLKFDILVSNPPYIP--LTEDV 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V+D +P ++L GG DGL  YR I     + +N+  + + E  YN K  +  + +   
Sbjct: 201 DPLVKDNEPHLALFGGEDGLKFYRQILKDAHKVVNEKNIIAFEHAYNHKEAMAELVKQHF 260

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
                   KD  G DR+ + 
Sbjct: 261 PNAEFETLKDLNGKDRMTII 280


>gi|163746456|ref|ZP_02153814.1| modification methylase, HemK family, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380341|gb|EDQ04752.1| modification methylase, HemK family, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 280

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 89/233 (38%), Positives = 121/233 (51%), Gaps = 8/233 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             +           I        + +++G R FY    ++S D  +PRPETE LVD AL 
Sbjct: 50  EEIAPDVAERFEQLIALRAVRVPVSQLIGRRAFYGRDFSISRDVLDPRPETETLVDLALG 109

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                       RILDLGTG+G + + LL E     G+GVD+S  A   A +NAV +GV+
Sbjct: 110 SHFD--------RILDLGTGSGCILVTLLAERAQATGLGVDLSEAACLQASANAVQHGVA 161

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ER +  QSDWFS+VEG FD+I+SNPPY+ +  +  +  E+R  +P ++L  G DGLS YR
Sbjct: 162 ERAEIRQSDWFSAVEGRFDLILSNPPYLAAEEMADVSPELRQHEPEMALTDGQDGLSIYR 221

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            IA     +L  +G   VEIG+ Q   V  IF       V    D  G  RV+
Sbjct: 222 IIATEAQGYLTPEGRVMVEIGWQQGEAVQDIFTKAGWGRVTLAHDLDGRPRVV 274


>gi|89070965|ref|ZP_01158191.1| modification methylase, HemK family protein [Oceanicola granulosus
           HTCC2516]
 gi|89043472|gb|EAR49686.1| modification methylase, HemK family protein [Oceanicola granulosus
           HTCC2516]
          Length = 289

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 120/275 (43%), Gaps = 20/275 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD+         +   ++ +     +           I R   HE +  + G R FY
Sbjct: 22  DPGRDARRLFAHALKVPPGRLTLILPEPVPADALAIYRQLITRRAAHEPVSHLTGRRMFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--- 118
                ++ D  +PRPETE L+++ALA            ++LDLG G+G + L LL E   
Sbjct: 82  GREFLVTPDVLDPRPETETLIEAALA--------EPFAQVLDLGMGSGCILLTLLAEMEA 133

Query: 119 --SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-------DVIV 169
              P   G GV++S  A E+A  N     + ER   LQ  W++ +   F        +IV
Sbjct: 134 MGHPEVWGAGVELSPAAFEVAWWNRNAFRLEERALLLQGSWYAPLAAEFGADMPGFALIV 193

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+       L   VR+ +PRI+L  G DGL+ YR I      HL   G   VEIG 
Sbjct: 194 SNPPYVTEDEWQALDATVREHEPRIALTDGADGLTAYREIVASAPAHLAPRGRLMVEIGP 253

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            Q + V  +     L  V   +D  G DRV+L  R
Sbjct: 254 AQGMAVAALMLEAGLSDVRIVQDLDGRDRVVLGRR 288


>gi|156326678|ref|XP_001618669.1| hypothetical protein NEMVEDRAFT_v1g224919 [Nematostella vectensis]
 gi|156199778|gb|EDO26569.1| predicted protein [Nematostella vectensis]
          Length = 244

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 80/233 (34%), Positives = 116/233 (49%), Gaps = 8/233 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G S   +   P+  LD  Q      AIVR    E +  ILG + F++
Sbjct: 19  PRLDAELLLAHALGKSRSYLHTWPERELDAPQLERYQAAIVRRQAGEPVAYILGQQGFWS 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +++ T  PRP+TELLV++ LA     +       +LDLGTGTGA+ LAL  E P +
Sbjct: 79  LELEVAAHTLIPRPDTELLVETVLA-----LLPATSAALLDLGTGTGAIALALASERPAW 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  GVD   +A+ +A+ N     +S   +  +S WFS + G  F +IVSNPPYI +    
Sbjct: 134 RLTGVDRVSEAVALAERNRARLKLS-NANFAESHWFSVLVGHRFQLIVSNPPYIAADDRH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
               +VR F+P  +L  G DGL   R I      +L   G   +E G++Q   
Sbjct: 193 LAEGDVR-FEPSSALVAGADGLDDIRLIIQQAPGYLEAGGWLLLEHGFDQAAA 244


>gi|24213008|ref|NP_710489.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24193693|gb|AAN47507.1| protoporphyrinogen oxidase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 286

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  L   ++ V+ + +L++ ++      I+   K++    I   + FYN
Sbjct: 26  ARLDAEILLADLLNLQRVKLYVNFERLLNETEKNAYRERILERSKNKPTAYITSQKAFYN 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ +   PRPETE LV+  L+     I +++   +LDL TG+G + ++L      +
Sbjct: 86  SIFFVNENVLIPRPETEELVEKVLSDFKGNIGEQN---VLDLCTGSGCIGISLKLARKDW 142

Query: 123 KGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
                DIS +ALE+A  NA    G  +    L+SD F S+  E  F++IV+NPPYI    
Sbjct: 143 NITLSDISKEALEVATKNAIQILGEEKHIQFLESDLFLSIPKESKFNLIVTNPPYIPISD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  +V D++P ++L    +      T+       L + G   +EI  +    ++   
Sbjct: 203 KAEMMKDVIDYEPHLALF-LENPKDFLSTLIAQAYERLVEGGKLYMEILPSLSETIISDS 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++        KD  G +R ++  R
Sbjct: 262 IAKGWENGKIEKDLSGKERFVILTR 286


>gi|84503528|ref|ZP_01001579.1| modification methylase, HemK family protein [Oceanicola batsensis
           HTCC2597]
 gi|84388018|gb|EAQ01066.1| modification methylase, HemK family protein [Oceanicola batsensis
           HTCC2597]
          Length = 279

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 130/262 (49%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   +     + + ++ +     +           I R L HE + RI+G R FY 
Sbjct: 24  PERDARRLMAHALEVGADRISLMAQDEIGPGSEEAFDGLIARRLLHEPVSRIVGGRWFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S  T +PRPETE LV  AL             R+LDLGTGTG + ++LL E    
Sbjct: 84  RWFDVSPATLDPRPETETLVQIALERRFD--------RVLDLGTGTGCIVISLLAERADA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +GVG D+S  AL  A  NA T GV++R   ++SDW + V+G FD+IVSNPPYI    +  
Sbjct: 136 RGVGSDLSEGALATAAENAATCGVADRLSLVRSDWMAGVDGTFDLIVSNPPYIAPEEMSG 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V  FDPR +L  G+DGL  YR IA      L   G   VEIG  Q   V  +F   
Sbjct: 196 LAPDVTKFDPRQALTDGVDGLGAYRAIAAQAPARLVPGGRLLVEIGPTQAGAVAGLFRDA 255

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L  +  F D  G DRV+   R
Sbjct: 256 GLTEIRTFPDLDGRDRVVAALR 277


>gi|170696250|ref|ZP_02887382.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia graminis C4D1M]
 gi|170138810|gb|EDT07006.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia graminis C4D1M]
          Length = 288

 Score =  244 bits (623), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   D  LD            R +  E I +I+G R+F+ + 
Sbjct: 27  LEARILLTHVLGWRHTQLITRADEALDSECVERYLALQARRVAGEPIAQIVGVREFFGLE 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++AL      +E     R+LDLGTGTGA+ +A+    P  + 
Sbjct: 87  FEVTPHVLIPRPETELLVETALT----AMENLPRPRVLDLGTGTGAIAVAIASMRPDAQV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             +D S +AL +A  NA     ++R        QSDW+ S++    FDVIVSNPPYI S 
Sbjct: 143 TALDRSAEALAVAARNAARLLDAKRAGGAVTFAQSDWYGSLDTALRFDVIVSNPPYIASG 202

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R ++PR +L    DGLS  R I  G    L   G+  +E GYNQ   V  +
Sbjct: 203 DPHLEQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLAARGVLWMEHGYNQAEAVREL 261

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             ++    V + +D  G +R+
Sbjct: 262 LTAQGFVDVRSERDLAGIERI 282


>gi|158337450|ref|YP_001518625.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017]
 gi|158307691|gb|ABW29308.1| protoporphyrinogen IX oxidase [Acaryochloris marina MBIC11017]
          Length = 312

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 117/271 (43%), Gaps = 12/271 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSV------LDDRQRFFLTNAIVRSLKHESIHRILGW 57
            ++    L  ++ L+   + + P +       +   +   L     R  +++ +  + G 
Sbjct: 43  RQELDWLLLEISNLTPLDLKLTPSAPPIVQMQVSLEELQQLWQ--QRLTENKPVQHLTGT 100

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             +    L +S D   PRPETELL+D  +  +        +    DLGTG+GA+ L L  
Sbjct: 101 THWRQFHLQVSKDVLIPRPETELLIDLVVDAAQNSARLDHLNLWADLGTGSGAIALGLAT 160

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
             P      VD S +AL +A+ N+ T G+  +       WF  +   EG F  IVSNPPY
Sbjct: 161 AFPQGTVHTVDCSREALAVAQRNSQTYGLDPQIHFHWGQWFGPLVGLEGQFSGIVSNPPY 220

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I + I+  L  EV + +P ++LDGG DGL   + I     ++L   G   +E+   Q   
Sbjct: 221 IPTEILPTLQPEVFEHEPHLALDGGEDGLDAIQEIVAIAPQYLQPGGFLLLEMMCGQDAA 280

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           V  +  ++     +    D  G  R     R
Sbjct: 281 VKTLLINQGQYEQIQIHPDLAGIPRFAQAYR 311


>gi|296876521|ref|ZP_06900572.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
 gi|296432514|gb|EFH18310.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptococcus parasanguinis ATCC 15912]
          Length = 276

 Score =  243 bits (622), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 11/260 (4%)

Query: 6   DSHSF--LCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ S     R     +    ++     ++   +  L +   +   H     I+G  +F  
Sbjct: 20  EAESLSFAYRALKNWTFTDFVLALQKEVEVEDQALLDSIFEQLKHHVPAQYIIGSAEFCG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
              T+      PRPETE LV   L  +         +R+LD+GTG+GA+ ++L    P +
Sbjct: 80  HVFTVDERVLIPRPETEELVTLILEEN-----DEKALRVLDIGTGSGAIAISLALAKPTW 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D+S +AL +A+ NA    +    +   SD    + G +D+IVSNPPYI    V+ 
Sbjct: 135 QVQASDVSEEALALAQKNAK--QLEAFLEFKSSDVLEQLAGPYDLIVSNPPYISRDDVEE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +G  V   +P ++L    DG + Y  IA      L  DG   +EIGY Q   V  +F   
Sbjct: 193 VGANVLASEPHLALFADRDGYAIYEKIAQQAPSVLTPDGKIYLEIGYKQGAKVKELFREA 252

Query: 243 -KLFLVNAFKDYGGNDRVLL 261
                V   KD  G DR+++
Sbjct: 253 FPDKRVRVLKDQFGQDRMVV 272


>gi|85709576|ref|ZP_01040641.1| protein chain release factors methylase subunit [Erythrobacter sp.
           NAP1]
 gi|85688286|gb|EAQ28290.1| protein chain release factors methylase subunit [Erythrobacter sp.
           NAP1]
          Length = 274

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 17/265 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G+S   +++     + D +     + + R   HE +  I G ++FY 
Sbjct: 21  ARLDAELLMAHALGVSRSDMLL---RHMSDAEPEGFASLVERRAAHEPVAHITGTQEFYG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PR ++E L+D+ L  +       +  R+LDLGTG+GA+ +  L E    
Sbjct: 78  REFAVSPHVLIPRGDSETLIDTVLESA------PNAKRVLDLGTGSGALLITTLLELEGA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            G+G+D S  ALE+A+SNA   G+   R   L+ DW         G FD+IV NPPY+E 
Sbjct: 132 SGLGIDASEPALELARSNAQALGLIGSRARFLRRDWHEEGWDDDLGTFDLIVCNPPYVEE 191

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L  +VRD++P  +L  G +GL  YR I   + + L+ +G+  +EIG +Q   V +
Sbjct: 192 D--AELDADVRDYEPASALFAGPEGLDDYRVIIPQLRKLLSAEGMAVLEIGASQGEAVSK 249

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLF 262
           I        V   KD     R  + 
Sbjct: 250 IATEHGF-CVKILKDLANRPRCAVL 273


>gi|29829453|ref|NP_824087.1| methyltransferase [Streptomyces avermitilis MA-4680]
 gi|29606561|dbj|BAC70622.1| putative modification methyltransferase [Streptomyces avermitilis
           MA-4680]
          Length = 293

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 108/266 (40%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   Q+ +  D+  D R        I R    E +  I G   F  
Sbjct: 35  PRNDAEELAAFVHGVKRGQLHLVKDADFDAR----YWEMIARREAREPLQHITGLAYFRY 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  I+DL TG+GA+ LAL +E P  
Sbjct: 91  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALALAQEVPRS 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
           +   V++S  AL   + N        R D  Q D    F  ++G  D+++SNPPYI    
Sbjct: 149 RVHAVELSEDALRWTRKNVE----GSRVDLRQGDALEAFPDLDGQVDLVISNPPYIPLTE 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF
Sbjct: 205 WEYVAPEARDHDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIF 264

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     R
Sbjct: 265 TEERGWADAADHPDLNNRPRFATARR 290


>gi|210634611|ref|ZP_03298188.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279]
 gi|210158739|gb|EEA89710.1| hypothetical protein COLSTE_02110 [Collinsella stercoris DSM 13279]
          Length = 357

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/317 (25%), Positives = 130/317 (41%), Gaps = 55/317 (17%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  VTG+S  ++ +  D  +D R+   +  A+VR  K E +  I G   F 
Sbjct: 26  RARLSAEWLLSSVTGMSRTELYMSFDKPMDPRELDAMHAAVVRRAKGEPLQYIAGETTFR 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFS----------------LPRIEK---------- 95
            + +        PRPETELLV+  L +                 LP   +          
Sbjct: 86  MIDVACEEGVLIPRPETELLVEEVLTYIDREVLGGAVASRARIELPWNSEVQAAREAEEK 145

Query: 96  ----------------------RDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCK 132
                                   V R+L++G GTG + L++  E       V  DI  +
Sbjct: 146 EAAADAAASDSVVEEVEGSSGEDAVARVLEVGCGTGCISLSIASERRDRVAVVATDIEPR 205

Query: 133 ALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLE 186
           A+++A  N    G+  +  D    +  S ++     G FDV+VSNPPYI + ++  L  E
Sbjct: 206 AVDLAARNRDALGIDAKTVDIRLGNLVSPLDRETEWGTFDVLVSNPPYIPTDVMATLPHE 265

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V DF+P ++LDGG DGL  +R +       L K+GL + E+          +  +  +  
Sbjct: 266 VADFEPSLALDGGTDGLDIFRRLVSAAPFMLRKNGLLACELYEGHLDAAADLCRAAGMED 325

Query: 247 VNAFKDYGGNDRVLLFC 263
           V    D  G  R++L  
Sbjct: 326 VRIVDDLTGRPRIVLAR 342


>gi|153808976|ref|ZP_01961644.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185]
 gi|149128309|gb|EDM19528.1| hypothetical protein BACCAC_03277 [Bacteroides caccae ATCC 43185]
          Length = 278

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
              C + GL +  + +  D +L + ++  L N I R  K+E I  I G+ +F   +  ++
Sbjct: 27  LICCDMLGLDALDIYMGKDIILSECKQRELENIIFRLQKNEPIQYIRGFAEFCGRKFKVA 86

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPET  LV+  +       E      +LD+GTG+G + ++L +  P  +    D
Sbjct: 87  PGVLIPRPETAELVELIVK------ENPGARHLLDIGTGSGCIAISLDQNLPDAEVEAWD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGL 185
           +S +AL IA  N     +  R    + D  S   G    +DVIVSNPPYI       +  
Sbjct: 141 VSEEALAIASENNKE--LDARVMFRRRDVLSDELGATSCYDVIVSNPPYITEAEKQDMEA 198

Query: 186 EVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V D++P ++L     D L  YR IA      L   G    EI      +   I E  + 
Sbjct: 199 NVLDWEPGLALFVPDDDPLRFYRRIARLGCDLLLPGGKLYFEINQAYGRETAHILEMNQY 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD  G DR++   R
Sbjct: 259 RDVRVIKDIFGKDRIVTANR 278


>gi|218528947|ref|YP_002419763.1| modification methylase, HemK family [Methylobacterium
           chloromethanicum CM4]
 gi|218521250|gb|ACK81835.1| modification methylase, HemK family [Methylobacterium
           chloromethanicum CM4]
          Length = 296

 Score =  243 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 96/265 (36%), Positives = 142/265 (53%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L  +  L+   + +     L       +  A  R L  E + RILG  +F+
Sbjct: 29  NARSDARFLLLHILSLTPLDLTLRGREPLGAAGAEAIRQAAERRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   L  +T  PRP+TE +V++AL       E+   +R++DLGTG+G + +ALL E P 
Sbjct: 89  GLPFALGPETLVPRPDTESVVETALRLL---PERERPLRLIDLGTGSGCILVALLHERPG 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D S  AL +A+ NA  NGV++R   L   W  ++EG FD+IVSNPPYI + ++ 
Sbjct: 146 ALGIGLDRSAAALAVARRNAAANGVADRAAFLCGSWLDALEGPFDLIVSNPPYIAAPVIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238
            L  EVR  DP+ +LDGG DGL  YR I   V+R    L+  G   +EIGY+Q   + R+
Sbjct: 206 TLEPEVRLHDPQAALDGGADGLDAYRAILADVARRPGLLSVQGALVLEIGYDQANALTRL 265

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
            +      +   +D  GNDRV+   
Sbjct: 266 AQEAGFEDIAVGRDLAGNDRVVTLR 290


>gi|332291079|ref|YP_004429688.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169165|gb|AEE18420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Krokinobacter diaphorus 4H-3-7-5]
          Length = 288

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 4/258 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  V  ++  +V +     +       L +   R  + E I  I+G  +FY +   ++  
Sbjct: 31  LEHVLKMNRVEVSLSRKMDISTSALTQLNDVTGRLSRSEPIQYIVGTTEFYGIEFQVNPA 90

Query: 71  TFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           T  PRPETE LVD  +   A S  + E ++ ++ILD+GTG+G + ++L K         +
Sbjct: 91  TLIPRPETEELVDWIITDKAESFVKSETQEKLKILDIGTGSGCIAISLAKYMSKAHVEAI 150

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL  A  NA  N V   F          +E  +D+IVSNPPY+  +    +   V
Sbjct: 151 DISQDALATAYQNAKRNEVDVTFYNQDVLAVEELEHKYDIIVSNPPYVRMLEKKEMRDNV 210

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P  +L     D L  YR I +     L+ +G    EI      +++ + +      
Sbjct: 211 LSNEPDSALFVSDDDPLIFYRKIGELAFESLSVNGFLYFEINEYLGKEMIDLLKVIGFEN 270

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V   +D  G DR++   R
Sbjct: 271 VELREDMFGKDRMIKASR 288


>gi|170017815|ref|YP_001728734.1| methylase of polypeptide chain release factor [Leuconostoc citreum
           KM20]
 gi|169804672|gb|ACA83290.1| Methylase of polypeptide chain release factor [Leuconostoc citreum
           KM20]
          Length = 332

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 5/253 (1%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     ++   +  +    +  +        I   ++ +    ILG   FY     +  
Sbjct: 78  LLSGALNINYAYLRANITRTMPAKLAAVWPKWIAMLIQQQPPQYILGHAPFYGREFIVDE 137

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV   LA +       + V +LD+GTG+GA+   L+ E+P  +G   DI
Sbjct: 138 RVLIPRPETEQLVAWILADA--SGTTGESVSVLDIGTGSGAIIETLMLENPRVRGFAADI 195

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S  AL +A  NA    +  +   ++SD FS +    FD+IVSNPPYI S   D +   V 
Sbjct: 196 SSDALTVAALNAQQLNIK-QLRFVESDVFSGLADLRFDLIVSNPPYIASSDEDEMDASVL 254

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLV 247
            ++P  +L     GL+ Y+ IA+G++ HL   G    EIGY Q   VV I +       V
Sbjct: 255 TYEPHDALFADNQGLAIYQKIAEGLAAHLTPQGRAYFEIGYKQGQQVVDIMQKALPKATV 314

Query: 248 NAFKDYGGNDRVL 260
              +D+ G DR++
Sbjct: 315 TLKQDFAGLDRMV 327


>gi|225848847|ref|YP_002729011.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644266|gb|ACN99316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 282

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 12/268 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               ++   L  +  +  H++  DPD  + D Q     N  ++  K   +  ++  ++F+
Sbjct: 21  NPQLEALIILQEILKIPKHKIFTDPDLEIKDYQEAI--NVALQRSKKVPLGYLIKKKEFF 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE+LV+  L     ++E       L++G G+G + ++LL     
Sbjct: 79  GLEFYIEEGVLIPRPETEVLVEKVLH----QLENLKNPLGLEVGVGSGCISVSLLYNKKD 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            K   +DIS KAL+I K NA    + +R     FD ++ D         D +VSNPPYI 
Sbjct: 135 LKMYALDISEKALKITKINAEKYDLLDRLTLIKFDVMKDDVKDLNLDRLDFVVSNPPYIS 194

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + L  EV+  +P+ +L  G  G   Y  I +    +L + G  + EIG NQ   V 
Sbjct: 195 EDEYESLPEEVKK-EPKEALISGKVGTEFYEKIVEKFKNYLKEYGFFAFEIGINQAEKVK 253

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I E      +  +KD  G DRVL+  +
Sbjct: 254 SILERNGFKNIKIYKDLAGIDRVLIASK 281


>gi|319936942|ref|ZP_08011352.1| modification methylase [Coprobacillus sp. 29_1]
 gi|319807878|gb|EFW04457.1| modification methylase [Coprobacillus sp. 29_1]
          Length = 284

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 14/263 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      +     HQ+ +  D  ++D         I R +  E I  I G   F++    
Sbjct: 24  AKVLFYHLANKEPHQLYLMMDEEVEDELYQAFQAGIKRYMDGEPIQYIKGKETFFSRDFI 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PR ETE LV++ L       E  + + + D+GTG+GA+ ++L  E      V 
Sbjct: 84  VNEDVLIPRYETEELVENILYKIDDYFEDYESIDLCDVGTGSGAIAISLALEESKLNVVA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS +ALE+A+ NA   G     +  Q D    +   E   D+ VSNPPYI       +
Sbjct: 144 TDISKEALEVARLNAQELGA--NIEFYQGDMLEPLIDREMKVDIFVSNPPYIPVE--QDI 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV----DVVRIF 239
              V+D +P ++L GG DGL  YR I   V   +    L + E+G++Q+      V   F
Sbjct: 200 ESVVKDNEPHVALFGGNDGLYFYRKIFSKVQSVIKDRALLAFEMGFDQRELMCQAVEHYF 259

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
            +         KD  G DR+L  
Sbjct: 260 PNIPY---EIIKDINGKDRMLFI 279


>gi|37521324|ref|NP_924701.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421]
 gi|35212321|dbj|BAC89696.1| protoporphyrinogen oxidase [Gloeobacter violaceus PCC 7421]
          Length = 286

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/273 (30%), Positives = 134/273 (49%), Gaps = 18/273 (6%)

Query: 2   QALRDSHS----------FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ES 50
           QAL ++             +  VTGL   +V +     L +  R  L     R ++    
Sbjct: 11  QALAEARVHDIDAAEIDYLIEAVTGLDRLRVRLGGPQAL-EAHREKLAALWRRRIEEAMP 69

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +LG   + +++L ++     PRPE+E LVD A+ F           R++DLGTG+GA
Sbjct: 70  LQYLLGTAHWRDLQLQVNPAVLIPRPESEALVDVAVDFCRSCA----GARVVDLGTGSGA 125

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIV 169
           + +A+ +  P      VD S  AL +A +N    G+SE+   L+ +WF  +    FD ++
Sbjct: 126 IAVAVARALPGATVWAVDASEAALVVAGANIERYGLSEQVHLLRGNWFVPLPTQPFDAVL 185

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI S  +  L  EVR  +P  +LDGG DGL   R I    +RHL   G+ ++E+  
Sbjct: 186 SNPPYIPSAEIAALMPEVRLHEPLSALDGGSDGLDAVRQIIADAARHLRPGGILALEVMA 245

Query: 230 NQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLL 261
            Q   VV++     +   +   +D+ G +R+++
Sbjct: 246 GQGPTVVQLLARDSRYGCIRTVRDWAGIERIVV 278


>gi|198273954|ref|ZP_03206486.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135]
 gi|198273032|gb|EDY97301.1| hypothetical protein BACPLE_00090 [Bacteroides plebeius DSM 17135]
          Length = 280

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 9/261 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      +  LS+ ++    D     ++   L + + R  + E +  IL    F      
Sbjct: 25  AKWISSDILHLSTLELYTGKDMNFSTKEWAELEDILRRLKQREPLQYILQEASFCGRSFH 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE LV+  ++       +   VRILD+GTG+G + ++L +  P  +   
Sbjct: 85  VEQGVLIPRPETEELVEWIVSD----FREAGQVRILDIGTGSGCIPVSLAQLLPEAQVSS 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184
            D+S +AL IA +N    G  ++     +D       E   DV+VSNPPYI       + 
Sbjct: 141 CDVSAEALRIAATNVKRYG--DKVTLFCADILKEELPECQVDVLVSNPPYITESERTDME 198

Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             V D++P ++L     D L  YR IA      L++ G    EI      + +R+ E   
Sbjct: 199 ANVLDWEPELALFVPDSDPLRFYRRIARKGLDWLSEGGALYFEINRAYGAETMRMLEELG 258

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   KD  GNDR++   R
Sbjct: 259 YRQIELRKDLSGNDRMIKAIR 279


>gi|298493041|ref|YP_003723218.1| protein-(glutamine-N5) methyltransferase ['Nostoc azollae' 0708]
 gi|298234959|gb|ADI66095.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           ['Nostoc azollae' 0708]
          Length = 299

 Score =  243 bits (621), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 119/263 (45%), Gaps = 11/263 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQ----RFFLTNAIVRSLK-HESIHRILGWRDFYNV 63
             L  + GL    + ++     D  Q       L     R L     +  I G   +   
Sbjct: 35  WLLQEIAGLDRLSLRLESFKAWDKVQTQISLAELDQLWQRRLHDRLPVQYIAGVTPWRMF 94

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L +SS    PRPETE+L+D A+A ++            DLGTG+GA+ L L +      
Sbjct: 95  KLAVSSAVLIPRPETEMLIDLAVAAAVSG--GVQSGHWADLGTGSGAIALGLAEVLINAT 152

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              VD S +AL +AK+NA   G  E+    QS W+  +E   G F  +VSNPPYI +  V
Sbjct: 153 IHAVDFSPEALAVAKTNAENVGFGEQVKFYQSSWWEPLESLKGQFSGMVSNPPYIPTDTV 212

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV   +P ++LDGG DGL   R + +    +L   G+  +E+   Q   V  + E
Sbjct: 213 LTLQPEVLKHEPHLALDGGADGLDCIRHLIEVSPAYLRPGGVWLIEMMAGQADIVRELLE 272

Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262
           ++     ++  +D  G +R  + 
Sbjct: 273 NKGHYCNISIHRDLAGIERFAVA 295


>gi|322804408|emb|CBZ01958.1| methylase of polypeptide chain release factors [Clostridium
           botulinum H04402 065]
          Length = 283

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|322411679|gb|EFY02587.1| putative methyltransferase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 279

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 77/246 (31%), Positives = 119/246 (48%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS   ++  +  +       L    +   +H S   + G   F +++L++      PRP
Sbjct: 34  WSSLDFLLHQNQEVSSDDCLILEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         +  LD+GTG+GA+ ++L KE P ++    DIS  AL +
Sbjct: 94  ETEELVDLILAEN-----PDTPLSALDIGTGSGAIAISLKKERPAWQLTASDISSDALSL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA    +      + SD FS + G FD+IVSNPPYI     D +GL V   +P ++L
Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGG 255
               DG + YR I +  S +L++ G    EIGY Q   +  +         V   KD  G
Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNIHFPQKRVRVLKDVFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|288817940|ref|YP_003432287.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6]
 gi|288787339|dbj|BAI69086.1| methyltransferase, HemK family [Hydrogenobacter thermophilus TK-6]
 gi|308751537|gb|ADO45020.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hydrogenobacter thermophilus TK-6]
          Length = 271

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +LRD    L  +  +   +V +  D  +          ++    +   +  +LG  DFY 
Sbjct: 14  SLRDRELLLAHLLKVKVGEVYLLLDRHVSKEMEEEYMRSLSLLEEGYPLQYLLGEWDFYG 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLV+  L    P  E        ++G GTG + + LL E P  
Sbjct: 74  RTFRVEEGVLIPRPETELLVEKVLEKVPPNKEAVGF----EIGVGTGCISITLLLERPKL 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
                D+  KA+ +A++NA  + V +R      D F  V+G+ FD ++SNPPYI      
Sbjct: 130 IMYADDLQEKAVHLAETNARLHKVEDRLFLKVGDMFEPVKGMVFDFVISNPPYIPQKEWA 189

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V+  + ++SL GG  G   Y   A  V + L +DG  ++EIG++Q   +  IF  
Sbjct: 190 GLPKGVKL-EGKVSLIGGEKGYEFYERFAKEVGKFLKEDGFFALEIGHDQGKILEDIFSQ 248

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F    +KDY G DRV+L  +
Sbjct: 249 EGFF-AQVYKDYAGQDRVILGWK 270


>gi|103488190|ref|YP_617751.1| HemK family modification methylase [Sphingopyxis alaskensis RB2256]
 gi|98978267|gb|ABF54418.1| modification methylase, HemK family [Sphingopyxis alaskensis
           RB2256]
          Length = 274

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +    G+    +++DP               + R + HE +  ILG+RDF+ 
Sbjct: 22  PRLDAELLMADALGIERQALLLDPARY---DVPADFDALVERRMAHEPVAYILGYRDFWT 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +      PRP++E L+ +A+              ILDLGTG G +  A + E    
Sbjct: 79  IRLAVGPGALIPRPDSETLIAAAV----QHFGAAGPRHILDLGTGPGTLLFAAMSEWADA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+GVD S  AL  A++NA+  G+++R   +Q DW + V G FD+I+ NPPYI       
Sbjct: 135 RGLGVDASDVALGYARANAIALGLADRVGLMQGDWAAGVTGRFDLILCNPPYIAESE--A 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V D +P  +L  G DGL+ YR I   +   L   G+  +EIG+ Q++ V  + ++ 
Sbjct: 193 LMPDVADHEPAGALFAGADGLADYRRIIPDLPHLLAPGGIAILEIGHTQRISVSEMADAA 252

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V   +D  G DR LL  
Sbjct: 253 GFA-VACRQDLAGRDRALLLT 272


>gi|310644399|ref|YP_003949158.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Paenibacillus polymyxa SC2]
 gi|309249350|gb|ADO58917.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus polymyxa SC2]
          Length = 299

 Score =  243 bits (620), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 114/264 (43%), Gaps = 5/264 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   ++   L  V GL   +             +      I R    E    I+G ++F
Sbjct: 36  LEPQHNARLLLEHVLGLEGTRFYAALGDPFPSSVKDTWERIIARKAAGEPAQYIIGQQEF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +S     PRPETELLV++ L     R+        LD+GTG+GA+ + L  E P
Sbjct: 96  YGRPFAVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPHALDIGTGSGAIAVTLAAERP 154

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +     DIS  ALEIA             +  + D  +   G   D++VSNPPYI +  
Sbjct: 155 RWHVAAGDISAAALEIAAQ--NAAANGAVIEFREGDLLAPFAGTAVDILVSNPPYIPAAD 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EVRD +PR++LDGG DGL  YR + + +        L   E+G  Q  DV  + 
Sbjct: 213 IAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLL 272

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           E       +    D  G +R +L 
Sbjct: 273 EQAGHWKNILIIPDLAGIERHVLG 296


>gi|218132000|ref|ZP_03460804.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697]
 gi|217985876|gb|EEC52216.1| hypothetical protein BACEGG_03623 [Bacteroides eggerthii DSM 20697]
          Length = 282

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 108/266 (40%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R L  E I  I G   F 
Sbjct: 24  EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 84  ERSYHVAPGVLIPRPETEELVEVMLR------EISSDARILDIGTGSGCIAISLSKAFPN 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            K    D+S  AL IA+ N      S  F   Q       +G   +DVIVSNPPYI    
Sbjct: 138 AKVTAWDVSEDALCIARRNNDDLQASVCF-VKQDVLAWGGDGGQCYDVIVSNPPYITESE 196

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V D++P  +L     D L  YR I +     L   G    EI          +
Sbjct: 197 KQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAMM 256

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
              +    +   KD  GNDR ++  R
Sbjct: 257 LCGQGYTGIRILKDISGNDRFVIAER 282


>gi|148378144|ref|YP_001252685.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502]
 gi|153933674|ref|YP_001382545.1| HemK family modification methylase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935975|ref|YP_001386097.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. Hall]
 gi|148287628|emb|CAL81693.1| protein methyltransferase [Clostridium botulinum A str. ATCC 3502]
 gi|152929718|gb|ABS35218.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. ATCC 19397]
 gi|152931889|gb|ABS37388.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A str. Hall]
          Length = 283

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLNF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|227514468|ref|ZP_03944517.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260663283|ref|ZP_05864174.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum 28-3-CHN]
 gi|227087154|gb|EEI22466.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus fermentum ATCC 14931]
 gi|260552135|gb|EEX25187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum 28-3-CHN]
          Length = 283

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +   S   ++ +    +   +      AI R    E    ++G   F+  +  
Sbjct: 28  AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   P  ETE LV+  L      +     +++LDLGTG+G + + L  E P ++   
Sbjct: 88  VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL+IA +N   +G     + ++SD F+ + +  FD+IV+NPPY+    +D +  
Sbjct: 144 SDISAAALKIALTNQRLHGT--NLNQVESDLFARLGDQRFDLIVTNPPYVALSEIDEMDP 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKL 244
           EV +++P ++L    +GL+ YR +      HL   G+   E G+ Q+  + ++ +     
Sbjct: 202 EVLEYEPPLALFASENGLAFYRRLFAAAGEHLTPRGVLFGETGHRQEERIQQLLKELAPS 261

Query: 245 FLVNAFKDYGGNDRVL 260
             +    D  G  R++
Sbjct: 262 AKIETRHDIAGRMRMI 277


>gi|297182759|gb|ADI18913.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF0010_09O16]
          Length = 279

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 145/264 (54%), Gaps = 5/264 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  DS   + +    +   +I++    +  R   +  N I      + I +I+  +DF
Sbjct: 20  ISAKLDSEILMSQAIRKNKKFIILNLHKEIKKRDLEYFDNLIQERAGRKPIAQIVKKKDF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     ++++   PRP+TE L++     +L  ++ ++ ++ILD+G G+G + +++LKE  
Sbjct: 80  WKYEFIVNNNVLIPRPDTETLIEQ----TLKLVKNKNRLQILDIGIGSGCILMSILKEKK 135

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            F G G+DIS K+L+I+K N     ++ R    +S+  +   G +D+IVSNPPYI+  I+
Sbjct: 136 NFIGTGIDISSKSLQISKVNGQKLRINNRLRLFKSNIDNFNTGKYDLIVSNPPYIKKSIL 195

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            CL  ++  F+P+ +LDGG+DGLS  R + +  S  + + G   +EIG++QK  V +I  
Sbjct: 196 KCLEKDI-GFEPKQALDGGLDGLSEIRKVINKSSELIKRSGHLIIEIGFDQKNKVKKILR 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
            +  ++    KD   +DR ++  +
Sbjct: 255 DKGFYIKKTVKDLSNHDRCIVGIK 278


>gi|92113654|ref|YP_573582.1| HemK family modification methylase [Chromohalobacter salexigens DSM
           3043]
 gi|91796744|gb|ABE58883.1| [protein release factor]-glutamine N5-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 286

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 113/262 (43%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +     ++   +    D  +           I        +  + G R+F+ 
Sbjct: 22  PRLDAEVLMMHAADVTRAWLYTWGDREIVPPAWARFDALIAARSLGHPVAHLTGEREFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +   T  PRP+TE LV++ LA            R LDLGTG+GA+ LAL  E P +
Sbjct: 82  LVLRVDDTTLIPRPDTECLVEALLARM-----PHATGRALDLGTGSGAIALALASERPAW 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
             VGVD    A+ +A +NA    +S     L SDWFS++    FDVI +NPPYI      
Sbjct: 137 HVVGVDKVPGAVRLATANAERLALS-NATFLVSDWFSALGNETFDVIAANPPYIAEDDPH 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               +VR F+PR +L     GL+    +A     HL   G  ++E G  Q   V  I  S
Sbjct: 196 LAQGDVR-FEPRSALVAEDAGLADLCHLALTARAHLAGGGWLAMEHGMTQAARVREILTS 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                V +  D G  +RV L  
Sbjct: 255 AGYRDVASVADLGARERVTLGR 276


>gi|294101725|ref|YP_003553583.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aminobacterium colombiense DSM 12261]
 gi|293616705|gb|ADE56859.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aminobacterium colombiense DSM 12261]
          Length = 286

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 133/267 (49%), Gaps = 11/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQ-VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +A  ++  FLC +  +S  + +++  +  L + +   L   + R +  E +  I+G+  F
Sbjct: 26  RAESETEWFLCSLKEISRSRFLLIASEVYLTEEEVISLNQMVQRRISGEPLQYIIGYESF 85

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     +      PRPETEL+V+ AL + +           LD GTG+G +   +L E P
Sbjct: 86  WGRDFLVGPGCLIPRPETELVVEEALRYFVK-------GSFLDWGTGSGCIAATILAERP 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177
             +GV +++S +A+E A  N     +  R     S   S +       D+I+SNPPYI +
Sbjct: 139 LSRGVAIEVSPQAIEWAWKNLRRYNLLHRCLLWHSREMSDIPVPSQSLDLIISNPPYIPT 198

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  EV  ++P ++LDGG DGL +Y+ +       L   G+  VE+G + + +V+ 
Sbjct: 199 AAIGRLMKEVAGYEPYVALDGGEDGLLYYKELLHVAPIWLKPGGMLVVELGDSTQGEVLA 258

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +  L L+   KD+ G  R+ ++CR
Sbjct: 259 NYNALGLRLMKLAKDFQGIYRIAVWCR 285


>gi|297182636|gb|ADI18794.1| methylase of polypeptide chain release factors [uncultured SAR11
           cluster bacterium HF4000_37C10]
          Length = 279

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    L  + G++    I +    +         +AI R +  E +  I+G ++F++  
Sbjct: 24  LDVQVILSDIMGVTRDFFIANSHINVSINTIKKFNHAIKRRINREPVAYIIGKKEFWSQD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRPETELL+   + F      K   + ILD+GTG+G + L++LKE  F +G
Sbjct: 84  FAVNHATLVPRPETELLIYKVVDFF-----KNKRINILDIGTGSGCILLSILKELDFSRG 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG+DIS KA++ A+ N+    +  +      D      G +D+IVSNPPYI S  +  L 
Sbjct: 139 VGIDISTKAIKTAQINSKNLNLFHQSKFKVFDISKFNVGKYDLIVSNPPYIPSKDIKNLS 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++ +++P ++L+GG+DGL   R +    +  L ++GL ++EIG+NQ + V  + +    
Sbjct: 199 KDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKRNGLLAIEIGFNQYLKVSSLLKQYGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             ++   DY  N R ++  +
Sbjct: 259 REMSRQCDYNHNVRCIISTK 278


>gi|160888033|ref|ZP_02069036.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492]
 gi|156862532|gb|EDO55963.1| hypothetical protein BACUNI_00441 [Bacteroides uniformis ATCC 8492]
          Length = 247

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 75/254 (29%), Positives = 105/254 (41%), Gaps = 12/254 (4%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            G S     +  D +L  +    L + + R    E I  + G   F      ++     P
Sbjct: 2   LGQSHIDYYLGKDMILSPKDEKELESILFRLCNFEPIQYVQGTARFLGRTFRVAPGVLIP 61

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L       E     RILD+GTG+G + + L KE P  +    DIS +AL
Sbjct: 62  RPETEELVERMLE------EVAPASRILDIGTGSGCIAVTLSKELPEAEVTAWDISGEAL 115

Query: 135 EIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            IA  N      S +F  +Q D      + +  FDVIVSNPPY+       +   V +++
Sbjct: 116 AIAGDNNRLLQTSVQF--VQRDVLTYQPAEDEYFDVIVSNPPYVTETEKKDMEPNVLNWE 173

Query: 192 PRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           P  +L     D L  YR I +     L   G    EI       V  +   +    V   
Sbjct: 174 PSGALFVPDSDPLRFYRRIGELGRSMLTVGGRLYFEINRAFGEAVASMLRKQGYTNVRIR 233

Query: 251 KDYGGNDRVLLFCR 264
           KD  GNDR ++  R
Sbjct: 234 KDISGNDRYVIAER 247


>gi|170756524|ref|YP_001779765.1| HemK family modification methylase [Clostridium botulinum B1 str.
           Okra]
 gi|169121736|gb|ACA45572.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum B1 str. Okra]
          Length = 283

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +V       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKVLKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKDKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLEDRVKVLKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|317487379|ref|ZP_07946169.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia
           3_1_6]
 gi|316921375|gb|EFV42671.1| protein-(glutamine-N5) methyltransferase [Bilophila wadsworthia
           3_1_6]
          Length = 315

 Score =  242 bits (619), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 85/300 (28%), Positives = 130/300 (43%), Gaps = 43/300 (14%)

Query: 2   QALRD-----SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +A  D     +   L  V G+S  ++   P++ L   Q   +T  + R    E    +LG
Sbjct: 19  EAAVDSPRLSAELILQHVCGISRVELATRPETFLTSDQLSRMTGLLRRRADGEPAAYLLG 78

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            R+FY     ++  T  PRPETE L+++AL                DLGTG+G + + L 
Sbjct: 79  QREFYGRDFRVTPATLIPRPETEHLIEAALKG------CDGPASFADLGTGSGCIAVTLC 132

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPY 174
            E P ++G+ VD+S +AL +A  NAV + V +R   +++D+   +      D++VSNPPY
Sbjct: 133 AERPDWRGLMVDLSGRALAVACQNAVRHDVRQRLQPVRADFTRPLLRPESLDLLVSNPPY 192

Query: 175 IESVIVDCLGLEVRDFDPRISLD------------------------------GGIDGLS 204
           +     + L  EVRDF+P  +L                                  +GL 
Sbjct: 193 VGKTEYEGLSAEVRDFEPVTALVPNFVDSDKIPSHDHHHDHGGSHSHVPSTPPDKPEGLE 252

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           H   +A      L   GL  +E GY Q   +  + ES K   V   KD  G+DRV    +
Sbjct: 253 HLIAVAQEAFVALKPGGLLLMEHGYAQGAAIKVLLESHKWENVLILKDLSGHDRVASARK 312


>gi|172058703|ref|YP_001815163.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Exiguobacterium sibiricum 255-15]
 gi|171991224|gb|ACB62146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Exiguobacterium sibiricum 255-15]
          Length = 282

 Score =  242 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  +    +++     L+  Q    +  ++  L    +  ++G++ FY     
Sbjct: 24  AEWLLMHVLQIDRTGLLIRLSDELEPEQDLLFSEYLLAHLNGVPVQHLIGYQPFYGRNFR 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETE L++        + E      I+D+GTG+GA+CL L  E        
Sbjct: 84  VSPAVLIPRPETEELIEFVTGRL--QGETFQPGEIVDIGTGSGAICLTLALELGQP-VTT 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
           VDIS +A+ +AK N  T G       L+ D  + + +    V+VSNPPYIE   +  L  
Sbjct: 141 VDISPEAIAVAKENQQTLG--GEVTFLEGDLLAPLADHSVRVLVSNPPYIEEDEL--LSD 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKL 244
            V D +P ++L GG DGL  YR + +  +R L  D      EIG+NQ  +V ++   ++ 
Sbjct: 197 VVFDHEPHLALFGGKDGLVFYRRLLEDSARVLRDDFRLIAFEIGHNQGQEV-QMMLKKRY 255

Query: 245 FLVNA--FKDYGGNDRVLLFCR 264
             V     KD  G DR++   R
Sbjct: 256 PTVETGILKDINGKDRIVYAER 277


>gi|309812205|ref|ZP_07705963.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dermacoccus sp. Ellin185]
 gi|308433892|gb|EFP57766.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dermacoccus sp. Ellin185]
          Length = 483

 Score =  242 bits (619), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 79/270 (29%), Positives = 118/270 (43%), Gaps = 18/270 (6%)

Query: 3   ALRDSHSFLCRVTGLS-----SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           A RD+   L  V G         +V+      L+D         I    +   +  + G 
Sbjct: 23  ADRDAALLLAHVLGCELGEVRRREVLGH---ELNDEDMARFEALIDERARRVPLQHLTGR 79

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F ++ L +    F PRPETE+LVD+AL  +          RI+DL TG+GA+ LA+  
Sbjct: 80  APFRSLELRVGPGVFVPRPETEMLVDAALEAA------PHGGRIVDLCTGSGAIALAIKA 133

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIE 176
           E P  +   V++S +A   A  N    G++       +      +EG FDV+VSNPPY+ 
Sbjct: 134 ERPDLEVYAVELSEEAAAWAALNCKQIGLTVNLSVEDARQALPELEGSFDVVVSNPPYVP 193

Query: 177 SVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           + +V  +  EV + DP I+L GG  DGL     IA+  +  L   GL  +E    Q   +
Sbjct: 194 TGMVP-IDPEVAEHDPEIALYGGSEDGLRFPLEIAERAAHLLKPGGLLVMEHADAQGESL 252

Query: 236 -VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              + + R         D  G  R+ L  R
Sbjct: 253 PEALLDRRGFEWARDEADLAGKPRMTLARR 282


>gi|299782949|gb|ADJ40947.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus fermentum CECT 5716]
          Length = 283

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +   S   ++ +    +   +      AI R    E    ++G   F+  +  
Sbjct: 28  AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   P  ETE LV+  L      +     +++LDLGTG+G + + L  E P ++   
Sbjct: 88  VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL+IA +N   +G     + ++SD F+ + +  FD+IV+NPPY+    +D +  
Sbjct: 144 SDISAAALKIALTNQRLHGT--NLNQVESDLFARLGDQRFDLIVTNPPYVALSEIDEMDP 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKL 244
           EV +++P ++L    +GL+ YR +      HL   G+   E G+ Q+  + R+ +     
Sbjct: 202 EVLEYEPPLALFASENGLAFYRRLFAAAGEHLTPRGVLFGETGHRQEERIQRLLKELAPS 261

Query: 245 FLVNAFKDYGGNDRVL 260
             +    D  G  R++
Sbjct: 262 AKIETRHDIAGRMRMI 277


>gi|94987068|ref|YP_595001.1| protoporphyrinogen oxidase HemK [Lawsonia intracellularis
           PHE/MN1-00]
 gi|3599925|gb|AAC36501.1| orfx; similar to Escherichia coli possible protoporphyrinogen
           oxidase (hemK) [Lawsonia intracellularis]
 gi|94731317|emb|CAJ54680.1| similar to Escherichia coli possible protoporphyrinogen oxidase
           (hemK) [Lawsonia intracellularis PHE/MN1-00]
          Length = 293

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 14/268 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  ++  Q+I+ P   +       L + ++R L  E I  + G ++F++    
Sbjct: 27  AELILSHVLNITRLQIIMTPFEPIPTNSYSTLNDIMLRRLHGEPIAYLTGKKEFFSREFK 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PRPETELL++  L    P  +    +   DLGTG+G + + L  E   + G+ 
Sbjct: 87  VTQATLIPRPETELLIEFVLNHINPTQQ----IYFADLGTGSGCIAITLAAERKNWLGIA 142

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184
            DIS +AL+IAK N++ N    +   LQSD+     +    D+ +SNPPYI    +  L 
Sbjct: 143 TDISSEALKIAKLNSLKNNTHSQLQFLQSDFTQPLCLPSSLDLYISNPPYISENELTSLP 202

Query: 185 LEVRDFDPRISLDGGIDG--------LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            EV  F+P+I+L              L  Y+ I       L   G+  +E G  Q   ++
Sbjct: 203 HEVISFEPKIALTPHKCIHLDEINTVLHCYKKIITQAEISLKPGGIIILEHGATQAEAIL 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + ++     V +  D    +R +   +
Sbjct: 263 LLLKNNIWTNVISHTDLTNKNRFITAYK 290


>gi|298372803|ref|ZP_06982793.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275707|gb|EFI17258.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroidetes oral taxon 274 str. F0058]
          Length = 283

 Score =  242 bits (618), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 7/253 (2%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L ++ GL++ + ++     L D Q   + +A+ R  ++E I  I+G+ DFY + L   
Sbjct: 29  LLLDKICGLNTTKRLISDKIYLSDEQNGRIDDALERLKRYEPIQYIIGYTDFYGLTLRTD 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LVD  L       E      ++D+ TG+G + + L K     K   +D
Sbjct: 89  RRALIPRPETEELVDWILQ------ECSTAKNVIDICTGSGCIAVCLAKYLKEAKVSALD 142

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           IS +A+ +A+ NA+   +   F         S+   FD+IV+NPPY+       +   V 
Sbjct: 143 ISSEAIGLARENALNQRLDIVFYQKDIMATDSLWQKFDLIVANPPYVTLNEKIDMMPNVL 202

Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  YRTIA    ++L   G+   EI      + V +  S     +
Sbjct: 203 DYEPSLALFVDDEDPLIFYRTIARFARKNLVDGGMLFFEINRKFGKETVDLLASMGFVDI 262

Query: 248 NAFKDYGGNDRVL 260
              KD  GNDR +
Sbjct: 263 VPKKDISGNDRFI 275


>gi|266618886|ref|ZP_06111824.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Bf]
 gi|263528592|gb|EEZ28359.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Bf]
          Length = 283

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   I++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|294631401|ref|ZP_06709961.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. e14]
 gi|292834734|gb|EFF93083.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. e14]
          Length = 279

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 108/266 (40%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   Q+    D+  D R        I R  + E +  I G   F  
Sbjct: 21  PRNDAEELAAFVHGVKRGQLHTVKDADFDAR----YWEVIARREQREPLQHITGRAYFRY 76

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  
Sbjct: 77  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRS 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
           +   V++S  AL   + N        R D  Q D    F  ++G  D+++SNPPYI    
Sbjct: 135 RVHAVELSEDALRWTRKNVE----GSRVDLRQGDALTAFPDLDGQVDLVISNPPYIPLTE 190

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD+DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF
Sbjct: 191 WEYVAPEARDYDPELALFSGEDGLDLIRGIERTAHRLLRPGGVVVIEHADTQGGQVPWIF 250

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     +
Sbjct: 251 TEERGWADAADHPDLNNRPRFATARK 276


>gi|317474401|ref|ZP_07933675.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii
           1_2_48FAA]
 gi|316909082|gb|EFV30762.1| protein-(glutamine-N5) methyltransferase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 278

 Score =  242 bits (618), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 108/267 (40%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S    C + G ++    +  D +L  ++   L   + R L  E I  I G   F 
Sbjct: 20  EAANLSRIVCCEMLGQTTIDYYLGKDIILSSKEMQKLNGILARLLNFEPIQYIQGTARFL 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE LV+  L       E     RILD+GTG+G + ++L K  P 
Sbjct: 80  ERSYHVAPGVLIPRPETEELVEVMLR------EIPSDARILDIGTGSGCIAISLSKAFPN 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            K    D+S  AL IA+ N      S  F   D L   W       +DVIVSNPPYI   
Sbjct: 134 AKVTAWDVSEDALCIARRNNDDLQASVCFVKQDVLA--WRGDGGQCYDVIVSNPPYITES 191

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR I +     L   G    EI          
Sbjct: 192 EKQEMERNVLDWEPFSALFVPNNDPLLFYRRIGELGRMMLVDGGRLYFEINRAYGEATAM 251

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +   +    +   KD  GNDR ++  R
Sbjct: 252 MLCGQGYTGIRILKDISGNDRFVIAER 278


>gi|325299194|ref|YP_004259111.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides salanitronis DSM 18170]
 gi|324318747|gb|ADY36638.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacteroides salanitronis DSM 18170]
          Length = 280

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 118/266 (44%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   + S L  V   S+  +    D    +++   L + + R  + E    I G   F 
Sbjct: 20  EAKALAKSILTEVFRFSALDLYDGKDREFSEKEHAALEDILSRLKRFEPFQYITGEASFC 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++     PRPET  LVD  ++      + +  V I+D+GTG+G + +AL +  P 
Sbjct: 80  GLPFHVAPGVLIPRPETAELVDWIVSD----FQGKAEVSIVDIGTGSGCIAVALARFLPG 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +    DIS  AL IA+ NA  N V  R D  Q D FS +  E    + VSNPPYI    
Sbjct: 136 ARVSAWDISDAALGIARRNAERNRV--RVDFRQVDVFSHIPAEAHAHIFVSNPPYIRERE 193

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V D++P ++L     D L +YR IA     HL   G+  VEI      + V +
Sbjct: 194 KADMERNVLDWEPELALFVPDGDPLRYYRRIAGLGLVHLAPSGVLYVEINQAYGAETVEL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   +   KD  GNDR++   R
Sbjct: 254 LAGIGYRDIVLRKDMSGNDRMIKAVR 279


>gi|303256164|ref|ZP_07342180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderiales bacterium 1_1_47]
 gi|302860893|gb|EFL83968.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderiales bacterium 1_1_47]
          Length = 267

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 13/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L  V G+     ++  D VL   +   L +   +  +   +  +LG ++F+    
Sbjct: 17  DKSFMLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PR +TE LV+  +              + DLGTG+G +   +  E P     
Sbjct: 77  LVNPSVLIPRSDTECLVEWLIEHL------PKNALVCDLGTGSGCIAATVALERPDLTVW 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
             D+S  AL +A++N    G       +Q  W         FD ++SNPPYIE       
Sbjct: 131 ASDLSESALAVAQANCKALGAD--VKLVQGSWLDPYPAELSFDAVISNPPYIERDDKHL- 187

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +   ++PR +L    DGL  YRTI   + R   K  L +VE G+NQ   V  IFE   
Sbjct: 188 --DALRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENG 245

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                 F+DYG N R   + +
Sbjct: 246 FKGSATFRDYGNNPRFTTWIK 266


>gi|301629495|ref|XP_002943875.1| PREDICTED: protein methyltransferase hemK homolog [Xenopus
           (Silurana) tropicalis]
          Length = 269

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 76/255 (29%), Positives = 110/255 (43%), Gaps = 12/255 (4%)

Query: 9   SFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
             L    G        ++   D  L D           R    E +  + G + FY + L
Sbjct: 1   MLLLHSLGRDPHERAWLLAHDDDALPDDALAVYQTLCQRRAAGEPVAYLTGRKAFYGLPL 60

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +   +PRP+TE LVD AL    P +      RI DLGTG+GA+ LAL  +    + +
Sbjct: 61  AVDARVLDPRPDTETLVDWALELLAPHV----APRIADLGTGSGAIALALQSQRADAQVL 116

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VD S  AL +A++NA+  G+  RF  ++  W   V G FD IV+NPPYI +        
Sbjct: 117 AVDASAGALAVARANAMRLGLPVRF--VRCHWLDGVAGPFDAIVANPPYIRADDPHL--- 171

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                +P  +L  G DGL   RTI+      L   G   +E G++Q   V  +  +    
Sbjct: 172 AALRHEPLSALVSGADGLDDIRTISAQAPMRLAPGGWLLLEHGWDQADAVQALLRAAGFA 231

Query: 246 LVNAFKDYGGNDRVL 260
            V +  D  G  R  
Sbjct: 232 AVASRHDLAGIARCT 246


>gi|325928211|ref|ZP_08189419.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325929424|ref|ZP_08190552.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325540199|gb|EGD11813.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|325541427|gb|EGD12961.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
          Length = 286

 Score =  241 bits (617), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFNALVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TE+LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTEVLVELALE----RLDTVPGRRVADLGTGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA ++G+    D  Q  WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMARRNADSHGLR-NVDCRQGSWFAPLAGEAFDLIASNPPYIAAHDPHLKQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +R  
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPGGWLLLEHGWDQGAAVAELLAARGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV L  
Sbjct: 259 AAVATHQDLERRDRVTLGR 277


>gi|237793456|ref|YP_002861008.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Ba4 str. 657]
 gi|229261092|gb|ACQ52125.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum Ba4 str. 657]
          Length = 283

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + D ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKDEEKEKYFQLIELRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   I+  
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRIKVLKSDLLTEAIKEKRKFDLIVSNPPYIRENIIKT 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|27375330|ref|NP_766859.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110]
 gi|27348466|dbj|BAC45484.1| protoporphyrinogen oxidase [Bradyrhizobium japonicum USDA 110]
          Length = 297

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 92/264 (34%), Positives = 137/264 (51%), Gaps = 2/264 (0%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  D+   L    GL    +I     +L + +   +     R +  E + RILG R+F+
Sbjct: 32  EAELDARILLGAALGLDLTGLIAQAARLLTEAEASRIAQHAQRRIAGEPVARILGTREFW 91

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS  T  PRP+TE +V+ AL     + +     RI D+GTG+GA+ LALL + P 
Sbjct: 92  GLPFRLSDATLVPRPDTETVVERALELFREQ-KATQQPRIADIGTGSGAILLALLHDIPG 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             GVG D+S  ALE A+ NAVT G+++R   +   + +++ G FD+IVSNPPYI S  + 
Sbjct: 151 AFGVGTDLSLNALETARGNAVTLGLADRSAFVACSYLAALRGPFDLIVSNPPYIPSAEIP 210

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L LEVR+ DP ++LDGG DG   YR +    +  L   G   VE G  Q  ++  +  +
Sbjct: 211 KLSLEVREHDPHLALDGGNDGYDAYRALIPQAAERLAPGGALIVEAGQGQARNIETLLTA 270

Query: 242 RKLFLVNAFK-DYGGNDRVLLFCR 264
             L +    K D  G  R +   +
Sbjct: 271 AALVVDRPPKADLAGIPRAVSARK 294


>gi|295836497|ref|ZP_06823430.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
 gi|197699009|gb|EDY45942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
          Length = 281

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 108/266 (40%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V  +   ++   PD+  D R       AI R    E +  I G   F  
Sbjct: 23  PRNDAEELAAYVHDVKRGELHTVPDADFDAR----YWEAIARREAREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  ++DL TG+GA+ LAL +E P  
Sbjct: 79  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--VVDLCTGSGAIALALAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
               V++S  AL   + N        R    Q D F+++   +G  D+++SNPPYI    
Sbjct: 137 TVHAVELSEDALVWTRRNVE----GSRVHLHQGDAFAALPELDGQVDLVISNPPYIPLTE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP ++L  G DGL   R I     R L   G+  VE    Q   V  +F
Sbjct: 193 WEYVAPEARDHDPEMALFSGEDGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLF 252

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     +
Sbjct: 253 TEERGWADAADHPDLNNRPRFATARK 278


>gi|74318512|ref|YP_316252.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
 gi|74058007|gb|AAZ98447.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
          Length = 287

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 121/259 (46%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++         ++   +I     V    Q       + R L  E I  I+G R+FY
Sbjct: 29  EARLEARVLAAHAWQVTPAWLIAHDTDVATAPQTAAFDALLARRLGGEPIAYIVGAREFY 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +S     PRPETELLV+ ALA    RI   +   +LDLGTG+G + + L  E   
Sbjct: 89  GRRFEVSPAVLIPRPETELLVELALA----RIPPDETTTVLDLGTGSGCIAITLALERSR 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   V+ S  AL +A+ NA T G S   +    DWFS + G  +D+IV+NPPYI     
Sbjct: 145 ARVTAVERSPAALALARRNAQTLGAS--VEFSAGDWFSDLTGRSYDLIVANPPYIADADP 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R  +P  +L  G DGL   R + DG   HL + G+  +E GY+Q   V  +  
Sbjct: 203 HLARGDLR-HEPVAALASGADGLDELRRLIDGARDHLRRPGMLLLEHGYDQADAVHALLR 261

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           S        + D  GN RV
Sbjct: 262 SGGFARPRCWHDLAGNPRV 280


>gi|15834913|ref|NP_296672.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Nigg]
 gi|270285083|ref|ZP_06194477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Nigg]
 gi|270289106|ref|ZP_06195408.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum Weiss]
 gi|301336479|ref|ZP_07224681.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia muridarum MopnTet14]
 gi|8163189|gb|AAF73543.1| modification methylase, HemK family [Chlamydia muridarum Nigg]
          Length = 290

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   +  +  +SS   +   D  L   +R      + +         I G   F  
Sbjct: 20  PQREAEDIMMDLLEVSSRGAL--HDIKLSSGERVSYWERVQKRGNRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S +   PR ETE+ V+  + +     EK+      D+  G+G + L++ K  P  
Sbjct: 78  IELQVSPEVLIPRQETEIFVEKIIGYLQTHKEKK---IFYDVCCGSGCIGLSVKKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V  DI  +AL +AKSNA  N +    D L  D F       D  V NPPY+       
Sbjct: 135 HVVLSDICSQALAVAKSNAKRNDLI--VDFLCGDLFEPFRIPADAFVCNPPYLSYKEFFK 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  EVR  +P  +L GG+ GL  Y  IA+ + + L   G+  +EIG NQ   V +IF  +
Sbjct: 193 VDPEVRCHEPWKALVGGVSGLEFYHRIAEHIHKILVPGGVGWLEIGSNQGESVKKIFRDK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +     FKDY   DR    
Sbjct: 253 GISGC-VFKDYAQLDRFFFL 271


>gi|330813116|ref|YP_004357355.1| methylase of polypeptide chain release factors [Candidatus
           Pelagibacter sp. IMCC9063]
 gi|327486211|gb|AEA80616.1| methylase of polypeptide chain release factors [Candidatus
           Pelagibacter sp. IMCC9063]
          Length = 284

 Score =  241 bits (617), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 134/263 (50%), Gaps = 4/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   L  V       +    + +L+  Q   ++  I R    E +  IL  +DF+N
Sbjct: 23  AKIDSEIILASVLKTDRINLSTQHNLILNKSQELLMSQLIERRKNKEPVAYILNKKDFWN 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETE+L++  L       +K  V+++LD+G G+G + ++ L+E    
Sbjct: 83  ETYFVDQRALIPRPETEILIEMVLKKIK---DKSKVLQLLDIGCGSGCLLISCLRELKKS 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
            G+G+DIS  AL ++K N     +++R +  +   F  +    FDVI+SNPPY+ S   D
Sbjct: 140 IGIGLDISSDALAVSKINVKNYKLNKRVELHKESIFHFLTLKKFDVILSNPPYLSSAEYD 199

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L ++V++F+P+ +L GG DG SHY+ I    S  L K+GL ++E+G  Q   +  I   
Sbjct: 200 NLEIDVKNFEPKTALKGGHDGTSHYKKIITFASMSLKKNGLLALELGDQQFFKIKEILAE 259

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
               +++ ++   G  R +L  +
Sbjct: 260 NSFRVLDKYRLINGEIRCILASK 282


>gi|313205777|ref|YP_004044954.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Riemerella anatipestifer DSM 15868]
 gi|312445093|gb|ADQ81448.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Riemerella anatipestifer DSM 15868]
          Length = 281

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 121/258 (46%), Gaps = 5/258 (1%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
             F     GL    +    ++ L  +Q    T AI +    +   +ILG  DF+ ++  +
Sbjct: 28  EIFGEHYLGLDKIGLRQSENTELPAQQITQYTKAINQLKSGKPYQQILGEADFFGMKFCV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE L+D A+        K ++ +ILD+GTG+G + + L K  P  +   +
Sbjct: 88  NQHVLIPRPETEELLDYAIKTISKEFSKTEI-KILDIGTGSGVIPIVLKKHFPNARVASI 146

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D S +AL IAK NA  +    +F  L      ++   +DVI+SNPPYI    V  +   V
Sbjct: 147 DFSKEALTIAKKNAERHHTEIKF-ILDDYLNYTLPTHYDVIISNPPYIGIEEVSEISDTV 205

Query: 188 RDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           ++F+P ++L     D L  YR IA     +LN  G   +EI      + + +++      
Sbjct: 206 KNFEPHLALFSPCSDPLVFYRKIATDAKHYLNNGGFLFLEINQKLGAETLALYKD--FSD 263

Query: 247 VNAFKDYGGNDRVLLFCR 264
               KD   NDR+++  +
Sbjct: 264 AQLIKDLSNNDRMIIAKK 281


>gi|153937927|ref|YP_001389501.1| HemK family modification methylase [Clostridium botulinum F str.
           Langeland]
 gi|152933823|gb|ABS39321.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum F str. Langeland]
 gi|295317602|gb|ADF97979.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum F str. 230613]
          Length = 283

 Score =  241 bits (616), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DAQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMGLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|78046500|ref|YP_362675.1| protein methyltransferase HemK [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034930|emb|CAJ22575.1| protein methyltransferase HemK [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 286

 Score =  241 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFDALVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TE+LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTEVLVELALE----RLDTVPGRRVADLGTGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA ++G+    D  Q  WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMARRNADSHGLR-NVDCRQGSWFAPLAGEAFDLIASNPPYIAAHDPHLKQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +R  
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLVPGGWLLLEHGWDQGAAVAELLAARGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV L  
Sbjct: 259 AAVATHQDLERRDRVTLGR 277


>gi|46581320|ref|YP_012128.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450742|gb|AAS97388.1| hemK protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311234982|gb|ADP87836.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris RCH1]
          Length = 295

 Score =  241 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   LC    L    +++ PD ++++      +  + R    E +  I+G ++F+     
Sbjct: 34  AEIILCHALSLRRIDIMLTPDRIVEEADCILFSELVARRATGEPLAYIVGEKEFFGRDFA 93

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++  T  PRPETE L+++AL             R +D GTG+G + + L  E     G+ 
Sbjct: 94  VNPSTLIPRPETEHLIETALESLRS-----GPARFVDAGTGSGCIAVTLCAERADLSGLA 148

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +D+S  AL  A  NA  +GV++R   ++ D+ +S+   G  D+  SNPPYI       L 
Sbjct: 149 LDMSAPALATASHNARRHGVAQRLAFVRGDFTTSLLRSGSLDLYASNPPYISEAEYTGLS 208

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EVRDF+PR +L  G  GL H   I    +R L   G+  +E G  Q  D+  +F     
Sbjct: 209 REVRDFEPRSALVPGDTGLEHAAAIIAEATRVLRPHGILLMEFGCMQGADMASLFTPYST 268

Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264
              +V   +D  G DR +   R
Sbjct: 269 LWEMVEVRRDLAGLDRFIFARR 290


>gi|167041274|gb|ABZ06030.1| putative CheR methyltransferase, SAM binding domain protein
           [uncultured marine microorganism HF4000_005D21]
 gi|167045779|gb|ABZ10425.1| putative methyltransferase small domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 279

 Score =  241 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 134/260 (51%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    L  + G++    I +    +         +AI R +  E +  I+G ++F++  
Sbjct: 24  LDVQVILSDIMGVTKDFFIANSHINVSINTIKKFNHAIQRRINREPVAYIIGKKEFWSQD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PRPETELL+   + F      K   + +LD+GTG+G + L++LKE    +G
Sbjct: 84  FAVNQATLVPRPETELLIYKVVDFF-----KNKRINVLDIGTGSGCILLSILKELDLSRG 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG+DIS KA++ A+ N+    +  +      D      G +D+IVSNPPYI S  +  L 
Sbjct: 139 VGIDISTKAIKTAQINSKNLNLFHQSKFKVFDISKFNVGKYDLIVSNPPYIPSKDIKNLS 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++ +++P ++L+GG+DGL   R +    +  L K+GL ++EIG+NQ + V  +      
Sbjct: 199 KDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKKNGLLAIEIGFNQYLKVSSLLRQYGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             ++   DY  N R ++  +
Sbjct: 259 REMSRQCDYNHNVRCIISTK 278


>gi|260063120|ref|YP_003196200.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
           HTCC2501]
 gi|88784689|gb|EAR15859.1| putative protoporphyrinogen oxidase [Robiginitalea biformata
           HTCC2501]
          Length = 304

 Score =  241 bits (616), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 15/263 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     L    + ++P  +L   +   L NA+ +    + +  I G   F ++ L +  
Sbjct: 30  LLEHYLDLPRFVLGLEPGKMLTREEEAPLFNALSQLAAGQPVQYITGTARFLDMDLRVGP 89

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV   L      + + +   ILD+GTG+G + L L K  P  +   +DI
Sbjct: 90  GALIPRPETEELVRWVLERHAADLREGN---ILDIGTGSGCIALGLAKSLPAARVTALDI 146

Query: 130 SCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSV------EGLFDVIVSNPPYIESV 178
           S +ALE+A+ NA   G+  R         + +W  S+         +D+I+SNPPYI   
Sbjct: 147 SGEALEVARENARHLGLDVRLVRADIRNPEGEWPESILNPEGEWPGYDLIISNPPYIPRG 206

Query: 179 IVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               L + VRD +PR +L     D L +YR IA    RHL   G   VEI  +       
Sbjct: 207 QEGQLAVHVRDHEPREALFAPDSDPLLYYRHIAGFSRRHLRGGGWLYVEIHEDFGAPTAE 266

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           +F    L  V+  KD  G DR L
Sbjct: 267 LFREAGLLEVSLKKDIFGKDRFL 289


>gi|169351466|ref|ZP_02868404.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552]
 gi|169291688|gb|EDS73821.1| hypothetical protein CLOSPI_02246 [Clostridium spiroforme DSM 1552]
          Length = 285

 Score =  241 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 112/262 (42%), Gaps = 8/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      +     H++ +  D  +D          +        I  I G   F+     
Sbjct: 25  AKVLFYHLANKEPHELYLMYDEEVDKELEKQFLMGMEEYYNGRPIQYIKGVETFFGRDFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ +   PR ETE LV++ L            + + D+GTG+GA+ ++L  E P  K   
Sbjct: 85  VNENVLIPRYETEELVENILYRIDDYFSGYKNITLCDVGTGSGAIAISLALEEPKLKVYA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS  AL +AK NA  N +    + L  D    +       D+ VSNPPYI       +
Sbjct: 145 TDISDLALTVAKENA--NNLKADVEFLVGDMLQPLIEKNLKVDIFVSNPPYIPQE--QEI 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V+D +P ++L GG DGL  YR I + V+  LN+  L + E+G++Q+  +    +   
Sbjct: 201 EAVVKDNEPHVALFGGNDGLYFYRKIFERVNELLNERALLAFEMGFDQRELMEEALQKYF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
                   KD  G DR+L   R
Sbjct: 261 PNDPYEIIKDINGKDRMLFIYR 282


>gi|308071168|ref|YP_003872773.1| HemK-like protein [Paenibacillus polymyxa E681]
 gi|305860447|gb|ADM72235.1| HemK-like protein [Paenibacillus polymyxa E681]
          Length = 299

 Score =  241 bits (616), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 5/264 (1%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   ++   L  V GL                 +      I R    E    I+G ++F
Sbjct: 36  LEPQHNARLLLEHVLGLEGTAFYAALGDPFPSTAKEAWERIIARKAAGEPAQYIIGRQEF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +S     PRPETELLV++ L     R+      + LD+G G+GA+ + L  E P
Sbjct: 96  YGRPFMVSPSVLIPRPETELLVEAILQHG-DRLWPSGAPQALDIGAGSGAIAVTLAAERP 154

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++    DIS  AL++A             +  + D  +   G   D++VSNPPYI +  
Sbjct: 155 SWRVAAGDISAAALKVAAH--NAAANGAAVEFREGDLLAPFAGTRVDILVSNPPYIPAAD 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EVRD +PR++LDGG DGL  YR + + +        L   E+G  Q  DV  + 
Sbjct: 213 IAGLQPEVRDHEPRMALDGGPDGLGPYRAMLEQLGLLQAPPRLIGFELGMGQARDVAGLL 272

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLF 262
           E       +    D  G +R +L 
Sbjct: 273 EQAGHWKNIIIVPDLAGIERHVLG 296


>gi|251782312|ref|YP_002996614.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
 gi|242390941|dbj|BAH81400.1| peptide release factor-glutamine N5-methyltransferase
           [Streptococcus dysgalactiae subsp. equisimilis GGS_124]
          Length = 279

 Score =  241 bits (615), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 8/246 (3%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            SS   ++  +  +       L    +   +H S   + G   F +++L++      PRP
Sbjct: 34  WSSLDFLLHQNQEVSSGDCLLLEKIFMDLSQHLSPQYLTGRAYFRDLQLSVDQRVLIPRP 93

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE LVD  LA +         + +LD+GTG+GA+ ++L KE P ++    DIS   L +
Sbjct: 94  ETEELVDLILAEN-----PDTPLSVLDIGTGSGAIAISLKKERPAWQLTASDISSDVLSL 148

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA    +      + SD FS + G FD+IVSNPPYI     D +GL V   +P ++L
Sbjct: 149 AQDNASHYQLD--ITFIVSDVFSQLSGTFDMIVSNPPYIAYEDKDEVGLNVYQSEPHLAL 206

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
               DG + YR I +  S +L++ G    EIGY Q   +  +  +      V   +D  G
Sbjct: 207 FAAEDGYAIYRRIIEEASNYLSEKGKLYFEIGYKQGEGIKALVNTHFPQKRVRVLRDVFG 266

Query: 256 NDRVLL 261
            +R+++
Sbjct: 267 KERMVV 272


>gi|57234022|ref|YP_181924.1| HemK family modification methylase [Dehalococcoides ethenogenes
           195]
 gi|57224470|gb|AAW39527.1| modification methylase, HemK family [Dehalococcoides ethenogenes
           195]
          Length = 277

 Score =  241 bits (615), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 10/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L    G+S  Q+ ++ +  L   +       + R L+ E    I G ++FY
Sbjct: 21  EARLEAEILLRHTLGISRVQLHLELERELHPDKEAAYFQTLKRRLEGEPSAYITGAKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L++ AL  +       +   I D+GTG+GA+ + L  E   
Sbjct: 81  GRAFQVDKRVLIPRPETEHLIEKALRIARS----YESPYIADIGTGSGAIAITLALELKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS +ALE+A++NA    + +R    + D   S+  + D++++N PY+ +    
Sbjct: 137 AYVYATDISAEALEVARNNAAEYRLEKRLMFYRGDLLESLPEMVDILMANLPYVPTAEAG 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L       +P  +LDGG DGL  YR +   +   L   G   +EIG +Q   +    + 
Sbjct: 197 LLKG-----EPVSALDGGADGLDIYRRLIPVLPGKLRPGGTALLEIGIHQSEVLANYIKE 251

Query: 242 R-KLFLVNAFKDYGGNDRV 259
                 V    DY G  RV
Sbjct: 252 YLPQAAVEISPDYAGIPRV 270


>gi|262195717|ref|YP_003266926.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliangium ochraceum DSM 14365]
 gi|262079064|gb|ACY15033.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliangium ochraceum DSM 14365]
          Length = 288

 Score =  241 bits (615), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  V G    ++ +D +  L D +       I R L  E +  ++G ++F++
Sbjct: 26  PRLEAQVLLAHVLGCDRTRLYMDFEKPLGDDELASYRGLIQRRLSGEPVAYLVGHQEFWS 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +  +   PR +TE +++  L     R      +RI D+ TG+GA+ + L  E P  
Sbjct: 86  LSFQVGPEVLIPRRDTETVIEQVLDQIGAR---DAALRIADVATGSGAIAITLAHELPSA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
             +  D+S  A  +A  NA  N V  R +    D  + + G   FDV+VSN PY+ +  +
Sbjct: 143 SVIATDLSQAAAAMATDNAARNQVDARVEVRVGDLLAPLAGEAPFDVLVSNLPYVPAGDI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV+  +PR++LDGG DGL   R +       L+  GL  +E G++Q   V  + +
Sbjct: 203 EGLAPEVQR-EPRLALDGGDDGLHLLRRLIADAPALLSDTGLLVLEHGFDQDAAVRALID 261

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +           D G   RV    R
Sbjct: 262 ATGAFEPAQTRLDLGKQPRVSWARR 286


>gi|46446287|ref|YP_007652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Protochlamydia amoebophila UWE25]
 gi|46399928|emb|CAF23377.1| putative HemK protein [Candidatus Protochlamydia amoebophila UWE25]
          Length = 279

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 4/261 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   L  +       +       L   +     N + R +K E +  I G  DFY 
Sbjct: 19  AKREAQDLLGSILKCDRSTLYTRHSQDLSLEEWQTCQNYLKRRMKGEPLAYIQGSIDFYG 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             + ++     PR ETE+LVD    + L   +K     + DL +G+G + +AL K+ P  
Sbjct: 79  CSIQVNPFVLIPRQETEILVDKISTY-LSHQKKLSGKILWDLCSGSGCIGIALKKKFPQL 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             +  D+S  AL +A+SNA  N V    + LQ D     EG     I+ NPPYI      
Sbjct: 138 HVISSDLSSAALSLARSNAQDNQVE--VEFLQGDLLEPFEGRRAHFIICNPPYISEAEFK 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L LEV++F+P+++L GG  GL  Y+ +A+ +  +L        EIGY Q   + +IF+S
Sbjct: 196 DLDLEVKEFEPKMALVGGETGLEIYQRLAEILPNYLYPHAKIWFEIGYKQGDSLKKIFKS 255

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                     D+ G+ R    
Sbjct: 256 SYWKRAFLENDWAGHHRFFFL 276


>gi|184154904|ref|YP_001843244.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
 gi|183226248|dbj|BAG26764.1| protoporphyrinogen oxidase [Lactobacillus fermentum IFO 3956]
          Length = 283

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +   S   ++ +    +   +      AI R    E    ++G   F+  +  
Sbjct: 28  AQFILEMLHDWSMTDLLANNRQPMPVEEATRYQRAITRVASSEPAQYVVGKAPFFGRKFV 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   P  ETE LV+  L      +     +++LDLGTG+G + + L  E P ++   
Sbjct: 88  VNRDVLIPETETEELVEWVLD----SMPADKELKVLDLGTGSGVIGITLALERPKWQVTL 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL+IA +N   +G     + ++SD F+ + +  F++IV+NPPY+    +D +  
Sbjct: 144 SDISAAALKIALTNQRLHGT--NLNQVESDLFARLGDQRFNLIVTNPPYVALSEIDEMDP 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKL 244
           EV +++P ++L    +GL+ YR +      HL   G+   E G+ Q+  + R+ +     
Sbjct: 202 EVLEYEPPLALFASENGLAFYRRLFAAAGEHLTPRGVLFGETGHRQEERIQRLLKELAPS 261

Query: 245 FLVNAFKDYGGNDRVL 260
             +    D  G  R++
Sbjct: 262 AKIETRHDIAGRMRMI 277


>gi|75907706|ref|YP_322002.1| modification methylase HemK [Anabaena variabilis ATCC 29413]
 gi|75701431|gb|ABA21107.1| Modification methylase HemK [Anabaena variabilis ATCC 29413]
          Length = 308

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 117/265 (44%), Gaps = 11/265 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDD----RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
             L  + GL    + ++      +         L     R L     +  I G   + N 
Sbjct: 37  WLLQEIAGLDRLALRLESFKDCSEVPMGLSLDKLDQLWQRRLGDRLPVQYIAGVTPWRNF 96

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPF 121
           RLT+SS    PRPETE L+D A+A         +      +DLGTG+GA+ L L    P 
Sbjct: 97  RLTVSSAVLIPRPETECLIDLAVAAVANSESALQLQQGHWVDLGTGSGAIALGLADAFPE 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
                VD S +AL IA+ NA   G+ +R    Q  W+  +   +G F  +VSNPPYI S 
Sbjct: 157 ATIHAVDCSLEALAIAQQNAQNTGLVDRMRFYQGRWWEPLTLLKGQFSGMVSNPPYIPSD 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           IV  L  EV + +P ++LDGG DGL   R + +    +L  +G+  +E+   Q   V  +
Sbjct: 217 IVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYLRPEGIWLIEMMAGQAEAVQAL 276

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262
              +     +    D  G +R  L 
Sbjct: 277 LLQQGSYSNIQIHSDLAGIERFALA 301


>gi|118468920|ref|YP_889201.1| modification methylase, HemK family protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170207|gb|ABK71103.1| modification methylase, HemK family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 281

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 112/261 (42%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        G+   +++   D   D        + +    K   +  ++G   F  + L
Sbjct: 26  DAELLAAHSLGVDRGRLMFVDDP--DPEALAAFEHLVAARAKRIPLQHLVGTAAFGPLTL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE L++ A+A  LPR        I+DL TGTGA+ LAL +  P  + +
Sbjct: 84  EVGPGVFIPRPETESLLEWAVAQQLPRD-----AVIVDLCTGTGALALALAQHRPQARVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V+ S  ALE A+ NA    V     D    D    ++G  D++VSNPPYI       L 
Sbjct: 139 AVEDSPAALEYARCNAAGTSVEVLAADVTAPDLLPELDGAVDLVVSNPPYIPEG--AELD 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EV D DP  +L GG DG++  R I    +R L   G C+VE         V  F     
Sbjct: 197 PEVADHDPAHALFGGPDGMAVIRPIVALAARWLRDGGKCAVEHDDTTSARTVEAFTHDGN 256

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V A  D  G  R +   R
Sbjct: 257 FTDVTARHDLTGRPRFVTATR 277


>gi|320529372|ref|ZP_08030460.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis
           F0399]
 gi|320138338|gb|EFW30232.1| protein-(glutamine-N5) methyltransferase [Selenomonas artemidis
           F0399]
          Length = 295

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 5/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G     + V  D  L+  +       +     +     +LG R+F  
Sbjct: 28  PRLDAEVLLAAVLGKDRMYLYVHFDEPLEPAELSTFRGYVKERGAYMPTAYVLGRREFMG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +   ++ DT  PRP+TE+LV SA+ F   R     + + I DLGTGTGA+ L++L  +  
Sbjct: 88  LVFRVTRDTLVPRPDTEILVQSAVDFLCARHAAGAEDMCIADLGTGTGAIALSVLHHADV 147

Query: 122 FKGVG--VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
            +     VDIS  A  +A+ NA   G++E+    + D  + + G  +D+I+SNPPYI + 
Sbjct: 148 AELHADAVDISPGAAAVARENAAQLGLAEKCTVHEGDLLAPLAGRSYDMILSNPPYIPAA 207

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  +VR ++P ++LDGG DGL  YR I       L   G  ++E+G  Q  DV  +
Sbjct: 208 DIAGLMTDVRTYEPHLALDGGADGLDFYRRIMADAPVMLKAGGAIAIEVGIGQAADVAAL 267

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLF 262
            E    +      KD  G +RV++ 
Sbjct: 268 AEQHPRIVRTELKKDLAGVERVVIA 292


>gi|17227611|ref|NP_484159.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120]
 gi|17135093|dbj|BAB77639.1| protoporphyrinogen oxidase [Nostoc sp. PCC 7120]
          Length = 304

 Score =  240 bits (614), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 115/266 (43%), Gaps = 11/266 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDD----RQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
             L  +  L    + ++      +         L     R L     +  I G   +   
Sbjct: 37  WLLQEIADLDRLALRLESFKDWSEVPMGLSLDKLDQLWQRRLGDRLPVQYIAGVTPWRKF 96

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPF 121
           +LT+SS    PRPETE L+D A+A          +     +DLGTG+GA+ L L    P 
Sbjct: 97  KLTVSSAVLIPRPETECLIDLAVAAVANSESAMHLQQGHWVDLGTGSGAIALGLADAFPE 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
                VD S +AL IA+ NA   G+ +R    Q  W+  +   +G F+ +VSNPPYI S 
Sbjct: 157 ATIHAVDCSVEALAIAQQNAWNAGLFDRMRFYQGRWWEPLSLLKGQFNGMVSNPPYIPSD 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           IV  L  EV + +P ++LDGG DGL   R + +    +L   G+  +E+   Q   V  +
Sbjct: 217 IVPTLQPEVVNHEPHLALDGGADGLDAIRHLIEVAPSYLRPGGIWLIEMMAGQADAVQAL 276

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFC 263
              +     +    D  G +R  L  
Sbjct: 277 LLQQGSYSNIQIHSDLAGIERFALAQ 302


>gi|311745454|ref|ZP_07719239.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Algoriphagus sp. PR1]
 gi|126578006|gb|EAZ82226.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Algoriphagus sp. PR1]
          Length = 277

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 71/254 (27%), Positives = 108/254 (42%), Gaps = 9/254 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    GL         + V +D     L   + R    E +  I+G   FY     +
Sbjct: 28  QWLLEYHLGLRKVD---GLNEVKEDSLSEDLFEDLQRLKSGEPVQYIIGKAPFYGRDFFV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 PR ETE LV   +  +         +++LD+GTG+G + ++L  E    +    
Sbjct: 85  DESVLIPRNETEELVHMIIKQN-----PSAGLKVLDIGTGSGCIPISLALELNKPEIYTA 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S +ALE+A+ NA   G    F  L     +      D++VSNPPY+     D L   V
Sbjct: 140 DVSEEALEVAEENAEHLGAQVTFFHLDILKDTPALSELDIVVSNPPYVPEAEWDELHSNV 199

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           RDF+P ++L     D L  YR IA+   + L   G    EI  N     V++ ES     
Sbjct: 200 RDFEPGLALFVPDHDPLLFYRVIAEKALKLLKPGGKLYYEIHNNFGPQTVKLLESLGYKN 259

Query: 247 VNAFKDYGGNDRVL 260
           ++  +D  G DR++
Sbjct: 260 IDLVQDLNGKDRMV 273


>gi|182677818|ref|YP_001831964.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633701|gb|ACB94475.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 306

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 137/258 (53%), Gaps = 3/258 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   LC   G+    +I DP   + D+ +  L     R L  E + RI+G R+F+++ 
Sbjct: 48  LDARLLLCAALGIDHAGLIRDPAEPIGDKAKV-LDAFCRRRLAREPVSRIIGEREFWSLD 106

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L     +PRP+TE L+D  L     R       R+LDLGTG+GA+  ALL E P   G
Sbjct: 107 LKLDPAVLDPRPDTETLIDLVLREVGKR--ACPPQRVLDLGTGSGAILAALLTEWPEAFG 164

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VGVD+S +   IA  N    G+ +R       W +++ G FD+IVSNPPYI    +D L 
Sbjct: 165 VGVDLSPRTCAIAAGNFARLGLGDRAAVFCGRWSAALSGRFDLIVSNPPYIVLDEIDTLA 224

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV  +DPR++LDGG DG   YR +   ++  L + GL ++E G  Q   +  +  + +L
Sbjct: 225 PEVSLYDPRLALDGGPDGFDAYRALLPPLASLLAEGGLVALECGAGQSPILQDLLRAAQL 284

Query: 245 FLVNAFKDYGGNDRVLLF 262
             ++   D  G++RV+L 
Sbjct: 285 EPMSIGLDLSGHERVVLA 302


>gi|58038520|ref|YP_190484.1| HemK family protein [Gluconobacter oxydans 621H]
 gi|58000934|gb|AAW59828.1| HemK family protein [Gluconobacter oxydans 621H]
          Length = 282

 Score =  240 bits (613), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 132/262 (50%), Gaps = 5/262 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A R++   LC  TG     ++      ++  Q      A+ R L+ E +  I G   F+
Sbjct: 23  DARREARLLLCWATGRDLGGLLSLDG--VEPAQELRFAEALKRRLEREPLAFITGETGFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L    DT  PR ++E L+++ L     R      + ILDLGTGTG + LA L E P 
Sbjct: 81  TLDLETGRDTLIPRADSEALIEALLDACPDR---SAPLSILDLGTGTGCLLLAALSEYPQ 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GVGVD+S +A  +AK N+V  G+ +R   L   W  ++ G FDV++SNPPYIES  + 
Sbjct: 138 ARGVGVDLSPQAAALAKRNSVRTGLEKRSAFLAGSWADALTGRFDVVLSNPPYIESGDLA 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  ++P  +LDGG DGL  YR +   +   L + G   +E+G  Q   V  +  +
Sbjct: 198 GLMPEVLQYEPARALDGGADGLDAYRILCAALPGLLVRGGYAILEMGIGQIDAVSALGTA 257

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V    D GG +R L+  
Sbjct: 258 SGLRDVAHKADLGGIERALVLQ 279


>gi|323527483|ref|YP_004229636.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1001]
 gi|323384485|gb|ADX56576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Burkholderia sp. CCGE1001]
          Length = 295

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 85/261 (32%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V G    Q+I   D VLD            R +  E + +I+G R+F+ + 
Sbjct: 33  LEARILLTHVLGWRQTQLITRADEVLDGACVERYLALQARRVAGEPVAQIVGAREFFGLE 92

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETELLV++AL      ++     R+LDLGTGTGA+ +A+    P  + 
Sbjct: 93  FEVTPHVLIPRPETELLVETALT----AMQDLARPRVLDLGTGTGAIAVAIASMRPDAQV 148

Query: 125 VGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             VD S +AL +A  NA     ++R        QSDW+ +++    FDVIVSNPPYI S 
Sbjct: 149 TAVDRSAEALAVAARNAARRLDAKRPGGAVIFAQSDWYGALDRGLCFDVIVSNPPYIASG 208

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R ++PR +L    DGLS  R I  G    L+  G+  +E GY+Q   V  +
Sbjct: 209 DPHLAQGDLR-YEPRGALTDEADGLSAIRAIVAGAPARLSSHGILWMEHGYDQAETVRTL 267

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             ++    V + +D  G +R+
Sbjct: 268 LTAQGFADVRSERDLAGIERI 288


>gi|88607095|ref|YP_505733.1| HemK family modification methylase [Anaplasma phagocytophilum HZ]
 gi|88598158|gb|ABD43628.1| modification methylase, HemK family [Anaplasma phagocytophilum HZ]
          Length = 282

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+      V GLS H+V+++PD V+   +       I R L    +  IL  R+F+++ 
Sbjct: 27  LDARLIAGHVLGLSEHEVLINPDLVVTAAKTKEFFEVIARRLAGVPVSHILRRREFWSID 86

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +  D  +PR +TE ++  A+        +   + I DLGTGT  + +ALL       G
Sbjct: 87  FAVGPDVLDPRQDTETIISEAIKLH----NRNRRITIADLGTGTACIIIALLSHYKNAVG 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V  + S KA  IA  N   +G++ R    ++ W     G FD+IVSNPPYI+   +  L 
Sbjct: 143 VAFEKSTKAYRIAHQNLQQHGMTGRVRLHRASW-EKCNGKFDLIVSNPPYIKRCKISGLQ 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR ++P ++LDGG+ G+  Y  I + + R L  DG   +EIG +Q   +        +
Sbjct: 202 PEVRLYEPMVALDGGVRGMEKYLQIFEILRRCLKPDGKAILEIGEDQ-HAIRTEALRYGM 260

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
              +   D     R ++F R
Sbjct: 261 KFCHYVYDLAAKPRCVVFKR 280


>gi|239928893|ref|ZP_04685846.1| methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291437220|ref|ZP_06576610.1| methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291340115|gb|EFE67071.1| methylase [Streptomyces ghanaensis ATCC 14672]
          Length = 281

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 110/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHTVKDSDFDAR----YWEVIARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V+ A+             RI+DL TG+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVEWAIDAVRAMDVVEP--RIVDLCTGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + N        R +  Q +    F  ++G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALVWTRRN----MDGSRVELRQGNALTAFPDLDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD+DP+++L  G DGL   R +     R L   G+  VE    Q   V  IF E 
Sbjct: 196 VAPEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFAED 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWTDAADHPDLNNRPRFATARK 278


>gi|293602160|ref|ZP_06684611.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC
           43553]
 gi|292819430|gb|EFF78460.1| protein methyltransferase HemK [Achromobacter piechaudii ATCC
           43553]
          Length = 276

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 115/259 (44%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +    L  V       ++      L           + R L  E +  +LG R+F  
Sbjct: 16  PRLEVRMLLEHVLQKPRAWLLAHDTDPLTPDVATAYEALLARRLAGEPMAYLLGHREFVG 75

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++ D   PRP+TE+LV++AL      +       +LDLGTG+GA+ +++       
Sbjct: 76  HRFLVTPDVLIPRPDTEVLVETALEC----VAAIAGPAVLDLGTGSGAIAISIALARRDA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           + +  D+S  AL++A +      ++     ++  WF +V     FD+IVSNPPY+ S   
Sbjct: 132 RVMASDLSAAALKVAAA--NAWELTASVRFVEGSWFDAVPAGEGFDLIVSNPPYVASDDP 189

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L  G  GL     I  G  RHL   G   +E G++Q   V  +  
Sbjct: 190 HLDQGDLR-FEPRGALTDGAGGLEDLARIVAGAGRHLKPGGALWMEHGWDQAQAVRELLT 248

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           S     V++  D  G +R+
Sbjct: 249 SAGFDNVHSRHDLAGIERI 267


>gi|325288194|ref|YP_004263984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga lytica DSM 7489]
 gi|324323648|gb|ADY31113.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga lytica DSM 7489]
          Length = 283

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 9/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +     L    + ++P+ V+   +   L   + +  KH  I  ILG   F  +   ++++
Sbjct: 31  IEHYLKLERFVLALEPNYVVTKDEESTLFLVVDKLKKHIPIQYILGAAHFMGLDFNVNTN 90

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV   L      +     + ILD+GTG+G + + L K  P  K   +DIS
Sbjct: 91  VLIPRPETEELVSWILN----EVNVNQEIAILDIGTGSGCIAITLAKNLPKAKVFALDIS 146

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +A+ +AKSNA  N V+     L+ +     S++  F++IVSNPPY+  +    +   V 
Sbjct: 147 KEAILVAKSNAEANNVT--VTFLEQNILEEPSLKQKFNIIVSNPPYVRDLEKKEMSANVL 204

Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + +P ++L     + L  Y+ I +    HL ++G    EI          +        +
Sbjct: 205 EHEPNLALFVSDNNPLVFYKAITNFSVNHLRENGKLFFEINQYLGEQTKELLVGLNYINI 264

Query: 248 NAFKDYGGNDRVL 260
              KD  GNDR+L
Sbjct: 265 KLKKDMYGNDRML 277


>gi|40062642|gb|AAR37563.1| modification methylase, HemK family [uncultured marine bacterium
           313]
          Length = 279

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 136/260 (52%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  + G++    I +    +         +AI R +K E +  I+  ++F++  
Sbjct: 24  LDAQVILSDIMGVTRDFFITNSHINVSKNTIKKFDHAIKRRVKREPVAYIIRKKEFWSQD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++  T  PR ETELL+   + F      K   + +LD+GTG+G + L++LKE    +G
Sbjct: 84  FLVNQATLVPRAETELLIYKVVDFF-----KNKRINVLDIGTGSGCILLSILKELDLSRG 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG+DIS KA++ A++N+    +  R      D      G +D+IVSNPPYI S  +  L 
Sbjct: 139 VGIDISAKAIKTAQTNSKNLNLFHRSKFKVFDISKFNVGKYDLIVSNPPYIPSKDIKNLS 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++ +++P ++L+GG+DGL   R +    +  L K+GL ++EIG+NQ + V  + +    
Sbjct: 199 QDIINYEPLVALNGGLDGLDLIRKVIYKSNSLLKKNGLFAIEIGFNQYLKVSSLLKKYGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             ++   DY  N R ++  +
Sbjct: 259 REMHRQCDYDHNVRCIISTK 278


>gi|86131745|ref|ZP_01050342.1| methyltransferase, HemK family [Dokdonia donghaensis MED134]
 gi|85817567|gb|EAQ38741.1| methyltransferase, HemK family [Dokdonia donghaensis MED134]
          Length = 291

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 75/257 (29%), Positives = 113/257 (43%), Gaps = 4/257 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  V  ++  ++ +     +   QR  L     R  K E +  I G   FY +   ++  
Sbjct: 31  LEHVLKMNRVEISLSRKQNIHPSQRKELEEITARLSKSEPMQYITGSSSFYGLDFQVNPA 90

Query: 71  TFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           T  PRPETE LV   +   A  L + E +D++R+LD+GTG+G + + L K         V
Sbjct: 91  TLIPRPETEELVAWIIDDVAQGLLKEEAQDMLRLLDIGTGSGCIAITLAKNINKATVEAV 150

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL  A  NA  NGV   F         +++ +++VIVSNPPY+       +   V
Sbjct: 151 DISQNALATAYQNAKANGVKVDFYNQNILETQALDEVYNVIVSNPPYVREQEKAMMRENV 210

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              +P  +L     D L  YR I +   + L   G    EI      + V + ++     
Sbjct: 211 LSNEPDSALFVSDQDPLIFYRKIGELARKSLAPSGALYFEINEYLGRETVALLKNIGFTD 270

Query: 247 VNAFKDYGGNDRVLLFC 263
           V   KD  G DR++  C
Sbjct: 271 VVLRKDMFGKDRMIKAC 287


>gi|254415118|ref|ZP_05028880.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC
           7420]
 gi|196177924|gb|EDX72926.1| methyltransferase, HemK family [Microcoleus chthonoplastes PCC
           7420]
          Length = 309

 Score =  240 bits (613), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 113/266 (42%), Gaps = 10/266 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFF----LTNAIVRSL-KHESIHRILGWRDFYNV 63
             L  V G+    + ++        +  +    LT    R L     +  ++G   +   
Sbjct: 42  WLLQEVAGIDPLSLRLESFKARSHIELRYPLPVLTQLWQRRLCDRLPVQYLVGITPWRRF 101

Query: 64  RLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            L +S     PRPETE L+D A+ A       + D  +  DLGTG+GA+ L L +     
Sbjct: 102 SLKVSPAVLIPRPETEYLIDLAVSATGQSATPQLDAGQWADLGTGSGAIALGLAEAFRSA 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
               VD S  AL IA+ NA   G   R    Q  W S +   +G    IVSNPPYI    
Sbjct: 162 TIHAVDYSHDALAIAQLNAQQLGFESRIQFYQGSWLSPLASLKGQLSGIVSNPPYIPRDE 221

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  EVRD +P ++LDGGIDGL   R +      +L   G+  +E+   Q   V ++ 
Sbjct: 222 LQQLQPEVRDHEPLMALDGGIDGLDCIRHLIRTAPDYLRPGGVWIIEMMAGQGDTVAQLL 281

Query: 240 ESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +     +    D  G DR  L  R
Sbjct: 282 HQQGRYCQIQILPDLAGIDRFALAYR 307


>gi|254443578|ref|ZP_05057054.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235]
 gi|198257886|gb|EDY82194.1| methyltransferase, HemK family [Verrucomicrobiae bacterium DG1235]
          Length = 286

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   +    G+   ++ +  D  L + +   + + + R  K E +  I+G   F+ 
Sbjct: 26  ARLNAEWLIASALGIDRMKLYMQFDRPLKEAELADMRSMVARRAKREPLQYIIGSAPFHE 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + +    PRPETE LV+  L       E     RI+DLGTG+GA+ LAL    P  
Sbjct: 86  LDLKVDARALIPRPETEQLVELVLGSL---GENDAPYRIIDLGTGSGAIALALAFALPRA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +   VD S +ALE+A+ NA+  G+  R + + SDWFS    EG FD+IVSNPPY+    +
Sbjct: 143 EIFAVDASREALELAQENALRCGLQNRVNFVLSDWFSDFDPEGEFDLIVSNPPYLTQEEL 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +    EVR+ +P  +L    +GLS   TI  G    L   G+  +E G   + +++ + E
Sbjct: 203 ESAEPEVREHEPVGALVADREGLSDLETILQGAFGRLKPGGMLWLETGIGHRAELLALCE 262

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +          D+ G  R +
Sbjct: 263 NAGYAESLGIDDWSGRARFV 282


>gi|332188263|ref|ZP_08389991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingomonas sp. S17]
 gi|332011762|gb|EGI53839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sphingomonas sp. S17]
          Length = 269

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 128/260 (49%), Gaps = 11/260 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+        G+  + +++D    + D         + R    E +  I G R F+ 
Sbjct: 20  ARLDAELLFAHALGIERNALLLDLTRTVPD----GFWPLVERREAQEPVAYITGTRGFWT 75

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PR ++E L+ +AL         R    +LDLGTG G + LALL E    
Sbjct: 76  LDLMVGPGALVPRVDSETLIAAAL----QHFGGRRPATLLDLGTGPGTLLLALLDEWRET 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           KG+GVD S +AL  A++NA   G+++R   +  DW +++ G FD IV+NPPYI +     
Sbjct: 132 KGLGVDRSAEALGYARANAAACGLADRARFVLGDWAAALTGPFDCIVTNPPYIGTGE--S 189

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  F+P  +L  G DGL  YR +A  + R +   G C VEIG+ Q   V  + E++
Sbjct: 190 LSHEVHGFEPASALFAGEDGLDDYRKLAPELRRLVAPGGACVVEIGHEQAPAVTGLLEAQ 249

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            L  V   +D GG  R LL 
Sbjct: 250 GLR-VALHRDLGGRPRALLA 268


>gi|261855645|ref|YP_003262928.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halothiobacillus neapolitanus c2]
 gi|261836114|gb|ACX95881.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Halothiobacillus neapolitanus c2]
          Length = 286

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A+ D  S + ++ GL   + +++ + +L       L +A  R    E +  I G++ F+
Sbjct: 25  DAMVDIRSLVSQLAGLDRARQLMELERLLPSATAARLRSAFERRAAGEPVAYITGFKPFW 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++  T  PRPETE L++ AL     +I  +  + + DLGTG+G + ++L  E P 
Sbjct: 85  RHEFLVTPATLIPRPETEHLLEWALE----KIPPQQALTVADLGTGSGVLAISLAIERPQ 140

Query: 122 FKGVGVDISCKALEIAKSN--AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESV 178
            +  G D+S  AL +A+ N   +    +     LQ  W         DVIVSNPPYI   
Sbjct: 141 IQVFGCDLSRDALLVARENESRLRADAALPIRWLQGSWLGMFKPESLDVIVSNPPYIRPD 200

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P+ +L    +G++ YR I +  S  L   G    E GY+Q   V   
Sbjct: 201 DPHLAIGDLR-FEPQSALVAQDEGMADYRQIIEQASTRLKPGGWILFEHGYDQANAVAEC 259

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
              +    ++   D  G  R     R
Sbjct: 260 LAQKGFQTISHRTDLAGQVRNTAAQR 285


>gi|186683987|ref|YP_001867183.1| HemK family modification methylase [Nostoc punctiforme PCC 73102]
 gi|186466439|gb|ACC82240.1| modification methylase, HemK family [Nostoc punctiforme PCC 73102]
          Length = 296

 Score =  239 bits (612), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 117/265 (44%), Gaps = 14/265 (5%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRF----FLTNAIVRSLK-HESIHRILGWRDFYNV 63
             L  V GL    + ++        Q       L     R L     +  I G   + N 
Sbjct: 36  WLLLEVAGLDRLALRLESFKNWPQIQLQLPLEKLDQLWQRRLNDRLPVQYIAGVTPWRNF 95

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           ++ +SS    PRPETE L+D ALA +             DLGTG+GA+ + L    P   
Sbjct: 96  QIAVSSAVLIPRPETECLIDLALAAA-----SGVSGYWADLGTGSGAIAIGLADVLPKAT 150

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
              VD S +AL IA++NA   G ++R    Q  W+  +   +G F  +VSNPPYI +  +
Sbjct: 151 IHAVDYSLEALAIAQANARNLGFADRIKFYQGSWWEPLTFLKGQFSGMVSNPPYIPTSTL 210

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV + +P ++LDGG DGL   R + +    +L   G+  +E+   Q   V  + +
Sbjct: 211 SSLQPEVVNHEPHLALDGGADGLDCIRHLIEISPSYLQPGGVWLIEMMAGQADAVRELLQ 270

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           S+     +    D  G +R  L  +
Sbjct: 271 SQGSYCKIQIHADLAGIERFALAYK 295


>gi|312869610|ref|ZP_07729761.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus oris PB013-T2-3]
 gi|311094896|gb|EFQ53189.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus oris PB013-T2-3]
          Length = 289

 Score =  239 bits (611), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 8/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L +  G  +  +++    V+   +  +   A+ + L H     I+G   FY  +  +
Sbjct: 30  QFLLEQRHGWDTTHLLLHNRDVMPAAEVEWFRTAVDQLLNHVPAQYIVGQTTFYGRQFKV 89

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     P  ET  LVD  L            +R+LDLGTG+G + + L  E P +     
Sbjct: 90  TPAVLVPEAETAELVDWVLT----SQPADHQLRVLDLGTGSGVIGITLALERPRWSVTLS 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL +A+ N   + +S     ++SD F+++ G  +D+IV+NPPYI+      +   
Sbjct: 146 DISSAALAVARENVRQHQLS--LPLVESDLFANLAGQRYDLIVTNPPYIDPADTAVMDQA 203

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V D +P I+L     GL  YR + +    HL   G    E GY+Q+  +  + +   +  
Sbjct: 204 VLDHEPPIALFADEHGLGFYRRLFELAGNHLRPGGQLFGETGYDQEKSIQALLKQCDQQA 263

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +    D  G  R++   
Sbjct: 264 QLAVRHDVAGKMRMIHAW 281


>gi|187777271|ref|ZP_02993744.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC
           15579]
 gi|187774199|gb|EDU38001.1| hypothetical protein CLOSPO_00823 [Clostridium sporogenes ATCC
           15579]
          Length = 292

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L +        ++ +PD  + + ++      I        +  ILG  +F  +  
Sbjct: 34  DTQLLLGKTLKKDRLFILTNPDYHIKEEEKKKYFQLIDLRKNKMPMKYILGTTEFMGLDF 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 94  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGL--FDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD    +++G   FD+IVSNPPYI   +++ 
Sbjct: 150 CYDIEDVPYNTTKENILKHNLQDRIKVLKSDLLTEAIKGKRKFDIIVSNPPYIREDVIET 209

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 210 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILHEY 269

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +   KD  G DRV+   +
Sbjct: 270 GFKDILCIKDLAGKDRVIKARK 291


>gi|187476812|ref|YP_784836.1| protein methyltransferase [Bordetella avium 197N]
 gi|115421398|emb|CAJ47903.1| protein methyltransferase [Bordetella avium 197N]
          Length = 269

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   + +V   S   ++   D                R L  E +  ++G R+F  
Sbjct: 13  PRLEARMLVEQVWRQSRAWLLAHDDDEARPDLVAAYEMLAQRRLAGEPMAYVIGEREFMG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TE LV++ALAF    ++ R   R+LDLGTG+GA+ +++    P  
Sbjct: 73  HVFQVTPAVLIPRPDTETLVEAALAF----LKTRPQARVLDLGTGSGAIAVSIALACPQA 128

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +    D+S +AL +A+ NA   GV  R    Q  WF+++  +  FD+IVSNPPYI     
Sbjct: 129 EVSATDLSAEALAVARGNADRLGV--RLHLAQGSWFAALDADARFDLIVSNPPYIHRNDA 186

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                ++R F+PR +L  G DGL+    IA      L   G   +E G++Q   V  + +
Sbjct: 187 HLAQGDLR-FEPRGALTDGADGLAALAEIALEAPGRLLPGGALWMEHGWDQAAAVRALLQ 245

Query: 241 SRKLFLVNAFKDYGGNDRV 259
              L  V +  D  G +R+
Sbjct: 246 EAGLRDVASQPDLAGIERI 264


>gi|297181090|gb|ADI17289.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0070_17D04]
          Length = 296

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 96/262 (36%), Positives = 141/262 (53%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            + DS   L    GL    +  +  +  DD         + R L  E + RI GWR+F+ 
Sbjct: 27  PVLDSRLLLGTALGLDRAVLPHETLAGFDDTAAAMFEAFLNRRLGGEPVSRIRGWREFWT 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL L+  T +PRP++E +V +ALA + PR       R+LDLG GTGA+ LA L E P  
Sbjct: 87  LRLELTPATLDPRPDSETIVAAALAATDPR----KPCRMLDLGCGTGALLLACLSERPDA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIV 180
            G GVDI+ +A+E A  NA  NG+S R D +  D+       G++D+I+ NPPYI +  +
Sbjct: 143 TGTGVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVAPGIYDLILCNPPYIPAGEI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L +EV  FDP ++LDGG DGL  +R +   ++  L++ G   +EIG  Q+  V+ +  
Sbjct: 203 DGLAVEVACFDPHLALDGGDDGLDCWRAVLPRIAASLSRGGRACLEIGAGQEDAVLGLAA 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
              L  +   KD  G  R L+ 
Sbjct: 263 KVGLCEIGREKDLAGICRCLVL 284


>gi|282889839|ref|ZP_06298378.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500413|gb|EFB42693.1| hypothetical protein pah_c004o249 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 285

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A + +   +  +  +    + +  D  L+D +       + R    E +  I G  +FY
Sbjct: 22  NARQQAVQLISDILHVVPIDLYLQFDRPLEDVELQKCREGLRRRGLREPLQYITGQVEFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++     PR ETE+L D        +     V+   D+  G+G + ++L K+ P 
Sbjct: 82  DCSFKVNPAVLIPRNETEILADLIAQNLRQQDLSGKVL--WDVCCGSGCLGISLKKKFPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            + +  DIS KAL++AK N+  N V    + +Q D+    +G   D +V NPPYI     
Sbjct: 140 LRVILADISDKALQVAKENSFLNRVD--VEFVQGDFLQPFKGTQTDFLVCNPPYIPESDW 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV+ ++P+ +L GG DGL  Y+ +   +   L   G   +EIG+NQ   V  +FE
Sbjct: 198 ESLEDEVK-YEPKEALLGGADGLQFYKRLMTELPFFLKPLGKVWLEIGFNQGTAVQTLFE 256

Query: 241 SR----KLFLVNAFKDYGGNDRVLLF 262
                 +  +    KD+ GNDR    
Sbjct: 257 QNSRGCRWKICRFEKDWSGNDRFFFL 282


>gi|124002114|ref|ZP_01686968.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134]
 gi|123992580|gb|EAY31925.1| protoporphyrinogen oxidase [Microscilla marina ATCC 23134]
          Length = 288

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L  +  L   QV+++       +    L NA+ R  ++E I  I    +FY
Sbjct: 24  EAQSMAFLLLEHLFQLDKMQVLINQPIQTIPQVLQVLDNALRRLQQYEPIQYITKQAEFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE LV   +        +   + +LD+GTG+G + + L K  P 
Sbjct: 84  GLPFRVKPGVLIPRPETEELVAWIIQDF-----QSQPLTLLDIGTGSGCIAVTLAKNMPQ 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            +   +D+S +AL IA+ NA  N V+ ++   + L   +    +   DVIVSNPPY+   
Sbjct: 139 AQVNALDVSNEALTIAQQNAALNKVNIQWIAHNILAPSFTHFADQSLDVIVSNPPYVTPA 198

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V   +P ++L     + L  Y  I     + L   G    EI         +
Sbjct: 199 EQAQMHENVLKHEPALALFVPQNEPLLFYEAITQVARQKLKPQGALYFEINEQFGAITKK 258

Query: 238 IFESRKLFLVNAFKDYGGNDRVL 260
           + E +    V   KD  G DR++
Sbjct: 259 MIEQQGFQEVEVRKDLFGKDRMV 281


>gi|315032690|gb|EFT44622.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0017]
 gi|315143715|gb|EFT87731.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2141]
          Length = 277

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKKNAQVLGAD--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|300769799|ref|ZP_07079679.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300763250|gb|EFK60066.1| protein-(glutamine-N5) methyltransferase [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 285

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 12/269 (4%)

Query: 4   LRDSHSF----LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           L ++ S     L  VTG++  Q  V     + + Q+  L   +   L+ + I  IL   D
Sbjct: 21  LEEAKSLFFLALEEVTGINRMQYAVRNTEAVTEEQKIQLDRILQELLRRKPIQHILKKAD 80

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY     ++     PRPETE LV   +            ++I+D+GTG+G + + L K  
Sbjct: 81  FYGEIFEVNEFVLIPRPETEELVHLIIGH---HRSSAVPLKIIDIGTGSGCIPVILKKHM 137

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIE 176
           P      +DIS +A+ +AK NA   G    F   D L+ ++  + E L+D+IVSNPPYI 
Sbjct: 138 PSAHVSALDISKEAIAVAKRNAKKLGTDIHFVNADILEWEYLFT-EQLYDIIVSNPPYIT 196

Query: 177 SVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               + +   V +F+P ++L       L  Y TIA     HL   G    EI      + 
Sbjct: 197 PKEKEDMHSNVLEFEPHLALFVEESTPLLFYETIASFALVHLKPSGDLYFEINQYYGPET 256

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +   +    V   KD  G DR++   R
Sbjct: 257 ANMLRKKGFSTVELIKDMHGADRMIHARR 285


>gi|114327272|ref|YP_744429.1| peptide release factor-glutamine N5-methyltransferase
           [Granulibacter bethesdensis CGDNIH1]
 gi|114315446|gb|ABI61506.1| peptide release factor-glutamine N5-methyltransferase
           [Granulibacter bethesdensis CGDNIH1]
          Length = 288

 Score =  239 bits (611), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 129/258 (50%), Gaps = 5/258 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L  + GL +  ++ D +  +       L   I R  K E +  ILG R+F+ 
Sbjct: 24  PRAEARLMLGALLGLDATGLLRDSEREVT---LPLLDEWITRRAKREPLAYILGAREFWG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ DT  PRP+TE L++ ALA   P   +  V R+LDLGTGTG + LA L E    
Sbjct: 81  LSFAVTPDTLIPRPDTETLIEYALALRPPT--QGMVRRVLDLGTGTGCLLLAALHEYRQA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D    A  +A+ NAV+ G+++R      DW       FD+++SNPPYI    ++ 
Sbjct: 139 TGLGIDRMQGAAALARRNAVSLGMADRAAFCAGDWAFCCADRFDLVLSNPPYIPDRDMEG 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VRD++P  +L  G  G+  YR I   +   L   G+  +E+G  Q+  V  +    
Sbjct: 199 LMADVRDYEPASALAAGEGGMEAYRRIIPSLPDLLTPAGVAILELGIGQEDGVGALAAPA 258

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L ++    D GG  R L
Sbjct: 259 GLRVIGCRVDLGGIARAL 276


>gi|302339535|ref|YP_003804741.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta smaragdinae DSM 11293]
 gi|301636720|gb|ADK82147.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta smaragdinae DSM 11293]
          Length = 309

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 12/267 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L    G+    V V     L +++       I + L    +  + G R+F+ + 
Sbjct: 35  LDASLLLAHAAGIDRTTVFVRLPDRLSEKEANRFRTLIHKRLTGTPVSYLTGRREFWGLD 94

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALL 116
             +++    PRP+TE LV++AL      +++ +         +RILDL  G+G + +AL 
Sbjct: 95  FLVNNAVLIPRPDTETLVEAALEAIGAGMQEAEPGKGMRGGGLRILDLCCGSGCIGIALA 154

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV--EGLFDVIVSNPP 173
            E P  + V  DIS  A++ A  N       ++    ++SD F  +     FD+IV+NPP
Sbjct: 155 SELPEAEVVLSDISSAAVDTALRNRQRLLPVDQDIVVMRSDLFGGLFAMAPFDLIVTNPP 214

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+     + +       +P  +L GG +GLS  R I       L  +G   +E   +Q  
Sbjct: 215 YLTDDEAEAM-ASAGWEEPDGALRGGKEGLSLIRKIIPASRHVLRSEGYLFIESAPSQSG 273

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVL 260
           ++ R+ +      V+  KD  G DRV 
Sbjct: 274 EISRMLQEEGFLKVSVKKDLAGRDRVT 300


>gi|298529664|ref|ZP_07017067.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511100|gb|EFI35003.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 279

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 122/259 (47%), Gaps = 7/259 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     LS+ ++++       D  R      I R  + E +  ILG ++FY++   
Sbjct: 27  ARVLLAHALDLSTEKLVLVFQDQTSDEIRRHYEELIARRSRGEPVAYILGRKEFYSLDFQ 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETELLV+           ++      DLGTG+G + + +  +   F  + 
Sbjct: 87  VSPQVLIPRPETELLVELV----GNSYSRQQKKIFADLGTGSGILGICIALDFSLFLCLA 142

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            DIS +AL +A+SNA  + VS+R    + D  + ++    D IV NPPYI       L  
Sbjct: 143 CDISKQALAVARSNARRHRVSDRILFFRGDMGAGIKPQSLDFIVCNPPYISVREFAGLEA 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR+F+P  +L  G  GL H + +    +R L   G   +E+G  Q   V RIF   +  
Sbjct: 203 EVRNFEPGQALLSGERGLGHIKRLEQEAARLLRGSGRVFLEMGSTQADHVRRIFS--RWS 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
             + ++D  G DR  + C+
Sbjct: 261 SCHIYQDLAGLDRAAVVCK 279


>gi|284992527|ref|YP_003411081.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geodermatophilus obscurus DSM 43160]
 gi|284065772|gb|ADB76710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Geodermatophilus obscurus DSM 43160]
          Length = 286

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 16/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G+S   ++   +  + D           +      +  + G   F +
Sbjct: 22  PRVDAELLLAHVLGVSRAGLLTLGE--VPDDAVARFEGLAGQRADRVPLQHLTGRAPFRS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE LV+ ALA    R+       ++DLG+G+GA+ L++  E P  
Sbjct: 80  LELAVGPGVFVPRPETEQLVEWALA----RLAGLAEPVVVDLGSGSGAIALSIAHEHPGA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSD-----WFSSVEGLFDVIVSNPPYI 175
           +   V+    A+E  + NA +   +     D L  D         ++G  D++VSNPPY+
Sbjct: 136 RVTAVERDPGAIEWTRHNAASRAAAGDTPVDVLSGDMTDPGLLRELDGTVDLVVSNPPYV 195

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  +  EV D DP ++L GG DGL   R +    +R L   G   +E    Q   +
Sbjct: 196 PDG--ATVPREVADHDPPLALWGGPDGLDVVRGLLRTAARLLRPGGGLGIEHADQQGGAL 253

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +  +      V    D  G  R     R
Sbjct: 254 PALVRASGSWTGVEDHPDLAGRPRYTTAHR 283


>gi|302521936|ref|ZP_07274278.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|318060717|ref|ZP_07979440.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces sp. SA3_actG]
 gi|318075508|ref|ZP_07982840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces sp. SA3_actF]
 gi|333024404|ref|ZP_08452468.1| putative methyltransferase [Streptomyces sp. Tu6071]
 gi|302430831|gb|EFL02647.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|332744256|gb|EGJ74697.1| putative methyltransferase [Streptomyces sp. Tu6071]
          Length = 281

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 106/266 (39%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V  +   ++   PD+  D R        I R    E +  I G   F  
Sbjct: 23  PRNDAEELAAYVHDVKRGELHTVPDADFDAR----YWETIARREAREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  ++DL TG+GA+ LAL +E P  
Sbjct: 79  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--VVDLCTGSGAIALALAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
               V++S  AL   + N        R      D F+++   +G  D+++SNPPYI    
Sbjct: 137 TVHAVELSEDALVWTRKNVE----GSRVHLHHGDAFAALPELDGQVDLVISNPPYIPLTE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP ++L  G DGL   R I     R L   G+  VE    Q   V  +F
Sbjct: 193 WEYVAPEARDHDPEMALFSGEDGLDTIRRIERTAHRLLRPGGVVVVEHADTQGGQVPWLF 252

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     +
Sbjct: 253 TEERGWADAADHPDLNNRPRFATARK 278


>gi|86747199|ref|YP_483695.1| HemK family modification methylase [Rhodopseudomonas palustris
           HaA2]
 gi|86570227|gb|ABD04784.1| modification methylase, HemK family [Rhodopseudomonas palustris
           HaA2]
          Length = 289

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 107/262 (40%), Positives = 145/262 (55%), Gaps = 3/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +   TGL    +IV  + VL   +   L    VR L  E + RILG R+F+ 
Sbjct: 26  AELDARLLIGEATGLDLTGLIVQAERVLTLDEAERLDAFAVRRLAGEPVARILGVREFWG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS DT  PRP+TE +V++AL     R E R    ILDLGTG+GA+ LALL E P  
Sbjct: 86  LALRLSDDTLVPRPDTETVVEAALDHL--RAEARARPLILDLGTGSGAILLALLSECPDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  DIS  AL  A++NA   G+++R   +  D+ +++ G FD+IVSNPPYI +  +  
Sbjct: 144 FGVATDISLGALRAARANAAALGLADRAGFVACDYAAALGGSFDLIVSNPPYIPASAIAA 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L +EVR+ DPR +LDGG DGL  YR I    +R L + G   VEIG  Q  DV  +  + 
Sbjct: 204 LDVEVREHDPRRALDGGEDGLDAYRRIIPEAARLLGRGGALVVEIGQGQGDDVAALMRAS 263

Query: 243 KLFLVN-AFKDYGGNDRVLLFC 263
            L +     +D GG  R +   
Sbjct: 264 GLAVPEPPRRDLGGVFRAVTGR 285


>gi|255348386|ref|ZP_05380393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 70]
 gi|255502927|ref|ZP_05381317.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 70s]
          Length = 290

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 114/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  DV +IF ++
Sbjct: 193 LDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKQIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KDY   DR    
Sbjct: 253 GIRG-RVLKDYAQLDRFFFL 271


>gi|254382316|ref|ZP_04997676.1| methyltransferase [Streptomyces sp. Mg1]
 gi|194341221|gb|EDX22187.1| methyltransferase [Streptomyces sp. Mg1]
          Length = 281

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHHVKDTDFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +VD A+           +  I+DL +G+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVDWAIHAVRAMDVVEPM--IVDLCSGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    Q D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNAE----GSRVTVHQGDALSALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGIVVIEHADTQGGQVPWIFAEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|302536944|ref|ZP_07289286.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
 gi|302445839|gb|EFL17655.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
          Length = 281

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHHVKDADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +VD A+           +  I+DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVDWAIHAVRAMDVVEPL--IVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    Q D  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNAE----GSRVTVHQGDALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-S 241
           +  E RD DP ++L  G DGL   R I     R L   G+  +E    Q   V  IF   
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGIVVIEHADTQGGQVPWIFADE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|315148531|gb|EFT92547.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4244]
          Length = 277

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQVLGAD--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|86142851|ref|ZP_01061290.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
           MED217]
 gi|85830883|gb|EAQ49341.1| putative protoporphyrinogen oxidase [Leeuwenhoekiella blandensis
           MED217]
          Length = 280

 Score =  239 bits (610), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                    L+++++ ++    LD+ QR     A+ R  ++E +  I+   +FY     L
Sbjct: 28  KVLAQEYLKLAAYEIPLNFQLELDEAQRNLFDKALSRLQQNEPLQYIVASTEFYGFPFQL 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S     PRPETE LVD           K     ILD+GTG+GA+ ++L K  P  K   +
Sbjct: 88  SPAVLIPRPETEELVDWIYTDF-----KNTSCTILDIGTGSGAIAVSLAKLLPEAKVTAI 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S  AL+IA++NA +N V+ +F         +++  +DVIVSNPPY+  +    +   V
Sbjct: 143 DVSEDALKIAEANASSNAVNVQFIKQDILDCQALDRSYDVIVSNPPYVRDLEKVEIKANV 202

Query: 188 RDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            +++P ++L     + L  Y+ IA+   + L  +G+   EI     V+ V + ++     
Sbjct: 203 LNYEPHLALFVEDQNALIFYKKIAELAIQALQPNGILYFEINQYLSVETVGLLKNIGFSQ 262

Query: 247 VNAFKDYGGNDRVL 260
           V    D+ G  R++
Sbjct: 263 VELRDDFAGKPRMI 276


>gi|168203425|gb|ACA21560.1| HemK [Candidatus Pelagibacter ubique]
          Length = 280

 Score =  238 bits (609), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 146/262 (55%), Gaps = 4/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   L  V   +   +I++ +  ++    +     + +  K + +  ++G +DF+N
Sbjct: 22  AQLDSEILLAEVINKNREYIILNQNHTVNKESYYQFKTLVEQRSKGKPVAYLVGKKDFWN 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++     PRP+TE++V+  L  +    + +  + ILD+G G+G + L++LKE    
Sbjct: 82  YQFQINEHVLIPRPDTEIIVEQVLKIT----KFKSNLMILDIGVGSGCILLSVLKEKKNS 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +G+G+D+S K++EI+K NA+  G+  R    ++D  +   G +D+I+SNPPYI  + +  
Sbjct: 138 RGIGIDLSKKSVEISKLNALNLGLLNRLKIFKTDVDNFNFGKYDLIISNPPYINKLDLKY 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V +F+P I+LDGG++G+S    + +  S  + K G   +EI +NQ+  V ++  ++
Sbjct: 198 LDKDVINFEPNIALDGGLEGISVISKVINKSSELIKKKGKLILEISFNQREKVKKLLINK 257

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
             ++    KDY  NDR ++  +
Sbjct: 258 GFYINKILKDYAKNDRCIISTK 279


>gi|146302781|ref|YP_001197372.1| HemK family modification methylase [Flavobacterium johnsoniae
           UW101]
 gi|146157199|gb|ABQ08053.1| modification methylase, HemK family [Flavobacterium johnsoniae
           UW101]
          Length = 284

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 2/253 (0%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L     L    + ++ +    +       + + +  K   I  +LG  +FY +   ++
Sbjct: 29  LILEDKHKLRQIDLALNHELAFTEEDFVVWDSLLAQLKKEVPIQYLLGKTNFYGLDFEVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE LV+  ++ +   I++++ ++ILD+GTG+G + ++L K  P      +D
Sbjct: 89  ENVLIPRPETEELVEWIISENK-GIDRKEKIKILDIGTGSGCIAVSLAKNLPNADVYAID 147

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S KA+E AK NA+ N V+  F          ++  +DVIVSNPPYI ++  + +   V 
Sbjct: 148 VSKKAIETAKRNAIRNDVNVTFIFQDILQAEELKCKYDVIVSNPPYIRNLEKEEIKKNVL 207

Query: 189 DFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D++P ++L     D L  YR IA     +L   G    EI      +++ +        +
Sbjct: 208 DYEPHLALFVDDNDALLFYRKIASLAQNNLLAKGQLYFEINQYLGKEMIELLGKMDFINI 267

Query: 248 NAFKDYGGNDRVL 260
           +  KD   NDR++
Sbjct: 268 DLRKDIYDNDRMI 280


>gi|315641824|ref|ZP_07896828.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM
           15952]
 gi|315482499|gb|EFU73038.1| protein-(glutamine-N5) methyltransferase [Enterococcus italicus DSM
           15952]
          Length = 277

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 10/246 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           ++  ++   +  L + +   LT+ + + L       + G   F+     +S  T  PRPE
Sbjct: 38  TTTWLLQMHNPSLPEDEE-QLTSDLRQLLADVPPQYLTGQEAFFGRTFVVSDATLIPRPE 96

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LVD  L        + +   ++D+GTGTGA+ + L  E P ++   VD+S +AL IA
Sbjct: 97  TEELVDQCLKHV-----QSEACHVVDIGTGTGAIAVTLKAERPLWQVAAVDLSSEALVIA 151

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           + NA    +         D    V+   +DVI+SNPPYI S     +   VR F+P+++L
Sbjct: 152 QKNAKR--IGSEVTFYHGDTLVPVKNQTWDVIISNPPYISSDEWSIMDASVRQFEPKMAL 209

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGG 255
                GL+ Y+ IA      L ++G   +EIGY Q   V +IF++      V   KD  G
Sbjct: 210 FADDQGLAMYKKIASQAQSCLAENGWLFLEIGYRQGPAVQQIFQAAFPQKEVQVKKDLFG 269

Query: 256 NDRVLL 261
             R+++
Sbjct: 270 QPRMVI 275


>gi|283782509|ref|YP_003373264.1| modification methylase, HemK family [Pirellula staleyi DSM 6068]
 gi|283440962|gb|ADB19404.1| modification methylase, HemK family [Pirellula staleyi DSM 6068]
          Length = 292

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 5/265 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +    D V+ D  R      + +  +   +  ++G R+FY+
Sbjct: 28  ARLDAEVLLASAQGCERIMLYTMFDQVVADDVRAKFRELVKKRGEGVPVAYLVGKREFYS 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++SD   PRPETEL+V +A+ F   +        ++D+GTG+GA+ LA+ K     
Sbjct: 88  LPLRVTSDVLIPRPETELVVMTAIDFIKAKAIA--APAVIDVGTGSGAIALAIAKNMKTA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   VD+S  AL +AK NAV N +  R   ++S+    +     FDVI +N PY+     
Sbjct: 146 QVTAVDVSPAALAVAKQNAVDNKLEARVTLIESNLLGEIPAATKFDVIAANLPYVSDAEY 205

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L   V+ F+P+++L GG  G      +    +  +    L  +E+       VV + +
Sbjct: 206 EELPHSVKAFEPKLALVGGTSGSELIEKLLPQAAERMQPGALLLLELSPMLAEKVVALLK 265

Query: 241 S-RKLFLVNAFKDYGGNDRVLLFCR 264
           +  +   V + KD  G+ RV+   R
Sbjct: 266 ADSRFEGVESLKDLAGHARVIRATR 290


>gi|56421912|ref|YP_149230.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426]
 gi|56381754|dbj|BAD77662.1| protoporphyrinogen oxidase [Geobacillus kaustophilus HTA426]
          Length = 293

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 106/265 (40%), Gaps = 7/265 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           R +   LC         +       +D+         + R    H  I  ++G+  FY  
Sbjct: 24  RAAEWLLCHHLRTDRAGLFARWREPVDEAVYERFAADVRRHAVDHVPIQYLIGYESFYGR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              ++     PRPETE LV   L         R  + ++D+GTG+GA+ + L  E+    
Sbjct: 84  LFLVNRHVLIPRPETEELVLGVLKRVPRLFAGRKRIDVVDVGTGSGAIAVTLALENKALS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
               DIS  AL +A+ NA   G       L  D    +       DV+VSNPPYI     
Sbjct: 144 VTATDISEAALAVARENARRLGA--NVSFLCGDLLQPIMAMGWTVDVVVSNPPYIPETDA 201

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L   V++++P  +L GG DGL  YR  A  +   L    L + E+G  Q   V  +  
Sbjct: 202 AMLSPVVKNYEPHTALFGGRDGLDFYRRFARELPLVLGAPALAAFEVGAGQGEAVAALLA 261

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFCR 264
           +      V    D  G DR++   R
Sbjct: 262 AAFPEAEVEVDFDLNGKDRMVYMTR 286


>gi|21223721|ref|NP_629500.1| methylase [Streptomyces coelicolor A3(2)]
 gi|256785186|ref|ZP_05523617.1| methylase [Streptomyces lividans TK24]
 gi|289769079|ref|ZP_06528457.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces lividans TK24]
 gi|8568783|emb|CAB94532.1| putative methylase [Streptomyces coelicolor A3(2)]
 gi|289699278|gb|EFD66707.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces lividans TK24]
          Length = 281

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++   PD+  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAYLHGVKRGELHTVPDADFDAR----YWEVVARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  AL+  + N        R D  Q D    F  ++G  D++VSNPPYI     + 
Sbjct: 140 AVELSEDALKWTRRNME----GSRVDLRQGDALTAFPDLDGQVDLVVSNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R +     R L   G+  VE    Q   V  IF E 
Sbjct: 196 VAPEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|260642491|ref|ZP_05859415.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii
           DSM 17565]
 gi|260621883|gb|EEX44754.1| protein-(glutamine-N5) methyltransferase [Bacteroides finegoldii
           DSM 17565]
          Length = 247

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 75/254 (29%), Positives = 110/254 (43%), Gaps = 12/254 (4%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            G     + +  D +L + +   L N I R  K+E I  I G+  F   +  ++     P
Sbjct: 2   LGFDPLDIYLGKDMILSECKERELENIIFRLQKNEPIQYIRGFAVFGGRKFKVAPGVLIP 61

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPET  LVD  +       E      +LD+GTG+G + ++L K  P       DIS +AL
Sbjct: 62  RPETAELVDWVVN------ENPGAHHLLDIGTGSGCIAISLDKRLPDADVEAWDISEEAL 115

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFD 191
            IA++N     +  R    Q D  S        FDVIVSNPPY+     D +   V D++
Sbjct: 116 AIARTNNEE--LESRVLFRQRDVLSDDWEKSPSFDVIVSNPPYVTEAEKDEMEANVLDWE 173

Query: 192 PRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           P ++L     D L  YR IA      L  +G    EI      ++  + E  +   +   
Sbjct: 174 PALALFVPDDDPLRFYRRIATLGRELLLPEGKLYFEINRAFGREIAYMLEMNQYRDIRVI 233

Query: 251 KDYGGNDRVLLFCR 264
           KD  G DR++   R
Sbjct: 234 KDIFGKDRIVTANR 247


>gi|225025403|ref|ZP_03714595.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC
           23834]
 gi|224941847|gb|EEG23056.1| hypothetical protein EIKCOROL_02301 [Eikenella corrodens ATCC
           23834]
          Length = 270

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 122/265 (46%), Gaps = 12/265 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  V  ++  ++I      L   QR  L     R  + E +  +LG R+FY 
Sbjct: 13  PRLEARLLVEAVCRITHVRLISRSGDELPQPQRAVLDMLAARRRRGEPMAYLLGSREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S     PRPETELLV++ALA   P        R+ DLG G+G + L +  E P  
Sbjct: 73  RSFRVSPAVLIPRPETELLVEAALARLPP------GGRLWDLGCGSGIIGLTVALERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
                DIS  AL +A++      +    +  Q  WF+++   EGLFD+I SNPPYIE+  
Sbjct: 127 AVRASDISPDALAVAQA--NAAALGASIEWAQGSWFAALPAAEGLFDIIASNPPYIEAGD 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+P  +L    DGLSH RT+A     +L   G   +E G+NQ   V  + 
Sbjct: 185 GHLQQGDLR-FEPAAALTDFADGLSHIRTLAAQAQGYLKPGGWLLLEHGWNQGEAVRGML 243

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                      +D  G DRV +  +
Sbjct: 244 AEHGWQQEETLRDLAGLDRVSIGRK 268


>gi|315022825|gb|EFT35849.1| putative protoporphyrinogen oxidase [Riemerella anatipestifer
           RA-YM]
 gi|325336782|gb|ADZ13056.1| Methylase of polypeptide chain release factor [Riemerella
           anatipestifer RA-GD]
          Length = 281

 Score =  238 bits (609), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 5/258 (1%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
             F     GL    +    ++    +Q    T AI +    +   +ILG  DF+ ++  +
Sbjct: 28  EIFGEHYLGLDKIGLRQSENTEFPAQQITQYTEAINQLKSGKPYQQILGEADFFGMKFCV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE L+D A+        + ++ +ILD+GTG+G + + L K  P  +   +
Sbjct: 88  NQHVLIPRPETEELLDYAIKTISKEFSQTEI-KILDIGTGSGVIPIVLKKHFPNARITSI 146

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D S +AL IAK NA  +     F  L       +   +DVI+SNPPYI    V  +   V
Sbjct: 147 DFSKEALVIAKKNAERHHTEIEF-ILDDYLNYKLPTHYDVIISNPPYIGIEEVSEISDTV 205

Query: 188 RDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           ++F+P ++L     D L  YR IA     HLN  G   +EI      + + ++  +    
Sbjct: 206 KNFEPHLALFSPCADPLVFYRKIATDAKHHLNNGGFLFLEINQKLGAETLALY--KYFSD 263

Query: 247 VNAFKDYGGNDRVLLFCR 264
               KD   NDR+++  +
Sbjct: 264 AQLIKDLSNNDRMIIVKK 281


>gi|182415308|ref|YP_001820374.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutus terrae PB90-1]
 gi|177842522|gb|ACB76774.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Opitutus terrae PB90-1]
          Length = 284

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
             Q+ +  +  L + +   +   + R  + E +  +LG  +F+ ++L        PRPET
Sbjct: 39  RMQLYLQFERPLSEAELERIRPLVRRRGQREPLQYVLGETEFFGLKLKTDRRALIPRPET 98

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           E LV+  +A      +     RILDLGTG+GA+ LAL       +  G+D S  AL +A 
Sbjct: 99  ERLVELVVAR---YADTAPPARILDLGTGSGAIALALASRFTDAQVTGLDHSEDALALAA 155

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            NA   G+  R   LQSDW++ +     F++IV+NPPY+ +        EVR+ +P ++L
Sbjct: 156 ENAAATGLPSRVTWLQSDWYAGLPDGAAFELIVANPPYLSAEETAQTQPEVREHEPHLAL 215

Query: 197 D-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             GG DGL+  R I  G ++ L   GL ++E G  Q   +  +        V +  D  G
Sbjct: 216 TSGGPDGLADLRKILAGATQFLAAGGLIALETGIAQHPALCALAREAGFNQVESLPDLTG 275

Query: 256 NDRVLLFCR 264
            DR ++  R
Sbjct: 276 RDRYVIAHR 284


>gi|189462017|ref|ZP_03010802.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136]
 gi|189431231|gb|EDV00216.1| hypothetical protein BACCOP_02689 [Bacteroides coprocola DSM 17136]
          Length = 280

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 118/261 (45%), Gaps = 9/261 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  V  LS+ ++    D      +   L + + R  ++E +  ILG  DF  +   
Sbjct: 25  AKWILTDVFCLSTTELYAGKDMNFSKNECDRLEDILSRLKRYEPLQYILGKVDFCGLPFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPET  L+D  ++        +  VRILD+GTG+G + + L K+    K   
Sbjct: 85  VAPGALIPRPETAELIDWIISD----YTDKAGVRILDVGTGSGCIPIVLGKKLKQSKITS 140

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184
            D+S KAL+IA+ N + N V       Q D F +   +   DV+VSNPPYI       + 
Sbjct: 141 WDVSEKALDIARRNKLLNQVD--ITLAQVDIFDTALPDIHVDVLVSNPPYITEKERSGME 198

Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             V D++P ++L     D L  YR IA+     L   G    EI      + V++ E   
Sbjct: 199 RNVLDWEPELALFVPDSDPLLFYRRIAEVGCDILVSGGTLYYEINRAYGKETVQLLEGMG 258

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V   KD  GNDR++   R
Sbjct: 259 YQSVELRKDMFGNDRMIKAFR 279


>gi|256848018|ref|ZP_05553462.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus coleohominis 101-4-CHN]
 gi|256715078|gb|EEU30055.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus coleohominis 101-4-CHN]
          Length = 282

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 8/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  + G S   +++    V+ D ++     AI+R  K E    ++G   F+     +
Sbjct: 28  EFVLKMIHGWSDADLLMHNREVMSDDEKKRYQTAILRIAKDEPTQYVVGKAPFFGRTFVV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   P  ETE L++  L      + +   +R+LDLGTG+G + + L  E P ++    
Sbjct: 88  NQDVLIPESETEDLIEWVL----QEMPQDQPLRVLDLGTGSGVIGITLSLECPRWRVTLS 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL +A +N   +G + R  T++SD F+ ++G  FD+IV+NPPYI     + +   
Sbjct: 144 DISAGALRVATANQRLHGTNLR--TVESDLFTHLQGERFDLIVTNPPYISPNATELIDRA 201

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLF 245
           V  ++P ++L    +GL  Y  + D V  HL + G+   E G++Q+  + R+F   +   
Sbjct: 202 VIKYEPPLALFASENGLGFYHRLFDQVQDHLTEQGVLFGETGFDQEESIQRLFTKLQPGA 261

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +    D     R++   
Sbjct: 262 TIETKHDIADRMRMIKAW 279


>gi|239944288|ref|ZP_04696225.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239990743|ref|ZP_04711407.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291447756|ref|ZP_06587146.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|291350703|gb|EFE77607.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
          Length = 281

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PDS  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHTVPDSDFDAR----YWETVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           V  ++DL TG+GA+ LA+ +E P  K  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPV--VVDLCTGSGAIALAMAQEVPRSKVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    + D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNAE----GSRVTVHKGDALSALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNKRPRFATARK 278


>gi|332881259|ref|ZP_08448909.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332680635|gb|EGJ53582.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 271

 Score =  238 bits (608), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 7/267 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L    GL+   + +  D      +R  L N + R  + E +  +LG  DF 
Sbjct: 7   EARAIARLVLETRFGLTPIDICMGRDRTFSLEERRELENIVKRLSQKEPVQYVLGQTDFC 66

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               +++     PRPETE L +  +     +        ILD+GTG+G + + L +E P 
Sbjct: 67  GRTFSVAPGVLVPRPETEELTEWIIQD--EKASGFSSPDILDIGTGSGCIAITLSQELPQ 124

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            +   +DIS +AL IA+ NA   G +  F   D L S        L+D+IVSNPPY+   
Sbjct: 125 AQVSAIDISTQALAIARKNAERLGAAVDFRCQDILDSPSKDQDSPLWDIIVSNPPYVCEH 184

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             + +   V  ++P  +L     D L  YR I +   + L + G   VEI      +  R
Sbjct: 185 EREDMEENVLRYEPSQALFVPDHDPLLFYRAIGEYAVKTLKEGGRLYVEINRAYGWETTR 244

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +F+S  L  V   KD+  N+R+ + CR
Sbjct: 245 LFQSLGLRDVTLKKDFYDNERM-IRCR 270


>gi|255534978|ref|YP_003095349.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341174|gb|ACU07287.1| putative protoporphyrinogen oxidase [Flavobacteriaceae bacterium
           3519-10]
          Length = 285

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 3/257 (1%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            F+ R+ G          +   D+ Q   LT  + +        +ILG  +FY +   ++
Sbjct: 31  VFVHRILGYDRFAQRKFSNETQDENQLQKLTEILKQLKTGMPFQQILGETEFYGLNFFVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            +   PRPETE L++ A+A       K   ++ILD+GTG+G + + L K  P  +   +D
Sbjct: 91  ENVLIPRPETEELLELAIAEITKLTVKNQSLKILDIGTGSGIIPVVLKKHFPAAELSAID 150

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            S KALE+A+ NA  + V+  F   Q      + G+FD+I+SNPPYI     D +   V+
Sbjct: 151 YSEKALEVARKNADFHQVNINF-IHQDYLGGELNGIFDIIISNPPYIGRDENDEISDSVK 209

Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +F+P ++L     + L  Y  IA+    HL+  G+  +EI      +   +F    L  V
Sbjct: 210 NFEPLMALFAPAENPLIFYEKIANDCKTHLSDGGMLFLEINQKLGSETRDLFTEV-LHEV 268

Query: 248 NAFKDYGGNDRVLLFCR 264
              KD  GNDR ++  +
Sbjct: 269 RLVKDLSGNDRFVVGMK 285


>gi|149185459|ref|ZP_01863775.1| protein chain release factor methylase subunit [Erythrobacter sp.
           SD-21]
 gi|148830679|gb|EDL49114.1| protein chain release factor methylase subunit [Erythrobacter sp.
           SD-21]
          Length = 276

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 122/265 (46%), Gaps = 17/265 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G     +++       D         + R   HE +  ILG ++F+ 
Sbjct: 25  ARLDAELLMAHALGTDRSAMLLRSMR---DPAPQGFEALVQRRAAHEPVAHILGHQEFFG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ DT  PR ++E+LV++AL        +RD  R+LDLGTGTGA+ L++L E+   
Sbjct: 82  RSFKVTPDTLIPRGDSEVLVEAALEL------QRDAARVLDLGTGTGALLLSVLAET-QA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESV 178
           +GVG D S  AL +A  NA   GV  R      DW    +++  G FD+IV NPPY+   
Sbjct: 135 QGVGTDRSPAALAVAHDNADLLGVEHRVRFHLLDWTEDGWAADLGQFDLIVCNPPYV--E 192

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  +V   +P  +L  G +GL  YR I   +   ++      +EIG+ Q   V  I
Sbjct: 193 DEADLDPDVCGHEPHGALFAGPEGLDDYRIILPQLRSLMSVSAAAILEIGHEQSPAVSEI 252

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
             +     V   +D  G  R L+  
Sbjct: 253 ARAVGFA-VELRRDLAGRPRALILT 276


>gi|225621001|ref|YP_002722259.1| modification methylase, HemK family [Brachyspira hyodysenteriae
           WA1]
 gi|225215821|gb|ACN84555.1| modification methylase, HemK family [Brachyspira hyodysenteriae
           WA1]
          Length = 290

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 11/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++ + +     ++  ++I +    L D     +   I R + +E +  I+  ++FY +  
Sbjct: 27  EAQTIIMHALNINKIKLISEGLRELTDSDINKIERFINRRINYEPLSYIINKKEFYGLDF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESPF 121
            + ++   PRPETE L+D  L ++       D + I D+G+G+G + + L +    ++  
Sbjct: 87  YVDNNVLIPRPETEELIDLVLDYT----NDEDNIFICDIGSGSGNIPITLKRLFLDQNKN 142

Query: 122 FKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
                ++IS  A E+ K NA+   G  +  + + +D  + + E  FD+IVSN PY+    
Sbjct: 143 IDITAIEISNGAFEVIKKNALNILGDEKIINIINADALTFTPENKFDIIVSNAPYVPLRD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  +  +F+P+ +L  G DGL  Y++    + ++L  DG    EIGY+Q   ++ I 
Sbjct: 203 KDLLQKD-LEFEPQNALYSGYDGLDFYKSFLSIIEKYLKDDGAFFFEIGYDQGEALINIC 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            S  +  V+  KD  G DR L+
Sbjct: 262 NSLDIKNVSVKKDLSGKDRFLV 283


>gi|149276500|ref|ZP_01882644.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39]
 gi|149233020|gb|EDM38395.1| putative protoporphyrinogen oxidase [Pedobacter sp. BAL39]
          Length = 288

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 5/255 (1%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +  V+GL+   V ++ + +L D++    +       K   +  +LG   FY   + +S D
Sbjct: 31  IEHVSGLNRMDVRMNWERILLDQEEQRYSEIATAMTKGRPVQHVLGETTFYGFSIQVSPD 90

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRD---VVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              PRPETE LVD  L       ++      +R++D GTG+G + +A+ K         V
Sbjct: 91  VLIPRPETEELVDWILTTLRSDFQQAPETGPLRVIDFGTGSGCIPIAIKKHIAEAVVEAV 150

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL++AK NA+ N    RF           E  +D++VSNPPYI+++    +   V
Sbjct: 151 DISQTALKVAKHNALMNNAEIRF-IQADMCNYKTEQKYDLMVSNPPYIKNLERIEMHKNV 209

Query: 188 RDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +P ++L       L  Y  +AD  ++ LN+ G    EI  +   + + +  S+    
Sbjct: 210 LEHEPHLALFVPDERPLLFYEALADLAAKSLNEQGYLFFEINEHLAQETIDMLASKSFKT 269

Query: 247 VNAFKDYGGNDRVLL 261
           +   KD  G DR+L+
Sbjct: 270 IELRKDMQGKDRMLM 284


>gi|169832289|ref|YP_001718271.1| HemK family modification methylase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169639133|gb|ACA60639.1| modification methylase, HemK family [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 287

 Score =  238 bits (608), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 11/253 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G     +  +P+  L + +R      +   L    +  + G R+F  +   ++ +   PR
Sbjct: 40  GCDRVDLYREPERALTETERGRFEQMVRDRLAGRPVAYLTGHREFMGLDFVVTPEVLVPR 99

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETEL+V+ AL          +   ++D+GTG+GA+ ++L +     + +  D+S  AL 
Sbjct: 100 PETELIVEEALRLM---SGGPEGSLVVDVGTGSGAIAVSLARYVRGARVLATDLSEAALT 156

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +A+ N   + V+   + L  D    +     G  D+I++N PYI +  +D L   VR  +
Sbjct: 157 VARLNVGRHRVA--VEFLLGDLMEPIPAALAGQIDLIIANLPYIPTAQMDTLPRAVRA-E 213

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           PR++LDGG DGL  YR +     R L   G    EI   Q    + I  S          
Sbjct: 214 PRLALDGGPDGLDLYRRLVPQAHRFLRPGGSLLFEIAPGQGRAALTIVPSPDWES-RILT 272

Query: 252 DYGGNDRVLLFCR 264
           D    +RV++ C+
Sbjct: 273 DLAERERVVIACK 285


>gi|326335033|ref|ZP_08201233.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692838|gb|EGD34777.1| protein-(glutamine-N5) methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 281

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 9/256 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +     ++     +  +  L   Q   +   +    K+  I  I     FY +   ++ +
Sbjct: 30  IEECLAINKADYFLYRERELSIEQINKVAKVLSELKKNVPIQYIFHRTYFYGMSFFVNDN 89

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE LV+  L  +     K   ++ILD+GTG+G + +AL K  P      +DIS
Sbjct: 90  VLIPRQETEELVEWILRET----PKNTPLQILDIGTGSGVIAIALKKYLPEATVFALDIS 145

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            KALE+A+ NA  N VS     LQ D    + +  +FD+IVSNPPY+ +     + L V 
Sbjct: 146 EKALEVAQRNAKENKVS--VHFLQEDILKVTHLGRIFDIIVSNPPYVRNSEKREIALNVL 203

Query: 189 DFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + +P ++L    D  L  Y  IA+   +HL+K G    E+      +++++   +    V
Sbjct: 204 EHEPHLALFVPDDNPLLFYEKIAELAHQHLSKQGKLFFEMNQYLAKEMIQMLNRKGFRKV 263

Query: 248 NAFKDYGGNDRVLLFC 263
              KD   +DR++L  
Sbjct: 264 VLQKDLSNHDRMILAT 279


>gi|166710769|ref|ZP_02241976.1| protoporphyrinogen oxidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 281

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFEALVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TELLV+ AL     R +     R  DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTELLVELALE----RFDTSPGRRAADLGTGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+     N      D    +WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALALARR-NAHNHALRNVDFRLGNWFAPLAGEAFDLIASNPPYIAAHDPHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +   
Sbjct: 200 GDLR-YEPATALASGSDGLDDIRLIVADAPTHLLPGGWLLLEHGWDQGDAVRALLAASGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                ++D    DRV L  +
Sbjct: 259 DAAATYQDLEARDRVTLGRK 278


>gi|329113398|ref|ZP_08242179.1| Bifunctional methyltransferase [Acetobacter pomorum DM001]
 gi|326697223|gb|EGE48883.1| Bifunctional methyltransferase [Acetobacter pomorum DM001]
          Length = 292

 Score =  238 bits (607), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 138/264 (52%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L     L+  Q++    +     + FF  + + R   HE    I G + F++
Sbjct: 32  PRREARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVKRRAAHEPFAYITGSKGFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  +  PR +TE L+ S L +   R ++  V  ILDLGTGTG + LA L E P  
Sbjct: 90  LDLAVSPASLVPRGDTETLITSLLEY---RPDQTSVQNILDLGTGTGCLLLAALAEYPKA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           +GVGVDI+ +A  +A +NA   G+ +    + ++W +++     FDV++SNPPYI +  +
Sbjct: 147 RGVGVDINPQAAMLAHANAQRCGMQDHALFIAAEWDAALAPNARFDVVLSNPPYIPTSDL 206

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR+ +P  +LDGG DGLS YR +   +   L   G+  +EIG  Q+  +  +  
Sbjct: 207 ADLMREVREHEPVRALDGGNDGLSAYRYLCGRLPFLLVDGGVAVLEIGIGQEEALRALAA 266

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +  L +V+   D  G  R ++  +
Sbjct: 267 TNALRVVDVKADLAGIARAVVLEK 290


>gi|297181250|gb|ADI17444.1| methylase of polypeptide chain release factors [uncultured
           Rhodospirillales bacterium HF0070_31K06]
          Length = 211

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 83/213 (38%), Positives = 119/213 (55%), Gaps = 3/213 (1%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  I G R+F ++R  +++D  +PRP++E+L+++ALA      E  +   +LDLGTGTG 
Sbjct: 1   MSHITGSREFRSLRFEVTADVLDPRPDSEVLIEAALALLPATGEPFN---VLDLGTGTGC 57

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + LA+L E P   G+GVD+S  AL +A+ NA   G++ER    + DW + + G FD+++S
Sbjct: 58  LLLAVLNERPAATGIGVDLSEAALAVARRNAWKLGLAERAQFRRGDWSNGLGGTFDLVLS 117

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI S  +D L  EV   +PR++LDGG DGL  YR IA    + L   G   VE G  
Sbjct: 118 NPPYIPSAEIDQLEPEVACHEPRLALDGGADGLDAYRAIAQRTPQLLANKGALIVEFGTG 177

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Q   V  IF    L       D  G  R  +  
Sbjct: 178 QAEAVCAIFAQHGLAEARLECDLAGRPRCFIAT 210


>gi|237802458|ref|YP_002887652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis B/Jali20/OT]
 gi|231273692|emb|CAX10470.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis B/Jali20/OT]
          Length = 290

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  DV +IF ++
Sbjct: 193 SDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKQIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KDY   DR    
Sbjct: 253 GIRG-RVLKDYAQLDRFFFL 271


>gi|317495270|ref|ZP_07953640.1| methyltransferase [Gemella moribillum M424]
 gi|316914692|gb|EFV36168.1| methyltransferase [Gemella moribillum M424]
          Length = 280

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 131/266 (49%), Gaps = 11/266 (4%)

Query: 2   QALRD--SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWR 58
           QA  +  +   L  +      +   +    L +         I + +K +  +  ++G+ 
Sbjct: 17  QAKEESLARFLLMYMLDEMR-EFNENLALELTEEDEQKYFQLINKHIKDDTPLSHLVGFE 75

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY+ +  ++SD   PR ETE LV   + +   R      +++LDL TG+G + + L KE
Sbjct: 76  YFYDRKFKVTSDVLSPRMETEELVYKVIDYI--RKNNLTNIKVLDLCTGSGIIGITLKKE 133

Query: 119 SP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 K +  DIS +AL +AK NA +         ++SD FS+++  FD+IVSNPPYI 
Sbjct: 134 LEEFDVKILASDISSRALTVAKENASSLEAD--ISFVESDLFSNIQDKFDIIVSNPPYIA 191

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 +   V ++DP ++L    +G+  YR I +    +LN+ G+   EIGY+QK  ++
Sbjct: 192 HDDKKTIKENVLNYDPHLALFADEEGMYFYRNIIEKSRPYLNEKGIMFFEIGYDQKEKII 251

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
            + E+ K   V  +KD  G DR+ + 
Sbjct: 252 TLGENNKFETV-VYKDINGRDRIAVL 276


>gi|295135419|ref|YP_003586095.1| modification methylase HemK [Zunongwangia profunda SM-A87]
 gi|294983434|gb|ADF53899.1| modification methylase HemK [Zunongwangia profunda SM-A87]
          Length = 283

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 8/259 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                   L+  Q+ ++P+  L+D +      A+ +    E I  I+G  +F+++   ++
Sbjct: 29  LLAEHFLQLNRLQIALEPNKKLNDTEVSEFEGALEKLRVFEPIQYIIGETEFFSLSFKVT 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV   L      ++++  + ILD+GTG+G + ++L K  P  +   +D
Sbjct: 89  PGVLIPRPETEELVQWILDEV--SLKQQQDLHILDIGTGSGCIPISLKKHLPKAQISAID 146

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLE 186
           IS +AL++A  N   N VS     +  D  S   +   FDVIVSNPPY+  +    +   
Sbjct: 147 ISEEALKVANLNTEKNKVS--VHLVHQDILSTQKLSRQFDVIVSNPPYVRELEKAEMQQN 204

Query: 187 VRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V  ++P  +L     + L  Y  I       L+K+GL   EI      +   + E     
Sbjct: 205 VLQYEPETALYVKDENPLLFYNKITKLAQEGLSKNGLLFFEINQYLGEETKTMVEEHDFR 264

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                KD  GN R+L   +
Sbjct: 265 -AELRKDMFGNFRMLKAQK 282


>gi|254387522|ref|ZP_05002761.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294815091|ref|ZP_06773734.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|326443453|ref|ZP_08218187.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces clavuligerus ATCC 27064]
 gi|197701248|gb|EDY47060.1| methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294327690|gb|EFG09333.1| Methyltransferase [Streptomyces clavuligerus ATCC 27064]
          Length = 281

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHTVKDADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL+ A+ NA       R      +  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSENALDWARKNAE----GSRVTVHHGNALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFNEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                     D     R     +
Sbjct: 256 SGWADAADHPDLNNRPRFATARK 278


>gi|294626138|ref|ZP_06704745.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294665202|ref|ZP_06730501.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292599587|gb|EFF43717.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292605025|gb|EFF48377.1| protoporphyrinogen oxidase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 286

 Score =  238 bits (607), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 117/259 (45%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +           + R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFDALVRRREAGEPVAYLTGARGFWTLEL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TE LV+ AL     R++     R+ DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTETLVELALE----RLDTLPGRRVADLGTGSGAIALAIASERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA ++G+    +     WF+ + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMARRNADSHGL-HNVECRLGSWFAPLAGETFDLIASNPPYIAAHDPHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +R  
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVTDAPAHLRPGGWLLLEHGWDQGAAVAELLVARGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV L  
Sbjct: 259 AAVATHQDLEQRDRVSLGR 277


>gi|242280070|ref|YP_002992199.1| modification methylase, HemK family [Desulfovibrio salexigens DSM
           2638]
 gi|242122964|gb|ACS80660.1| modification methylase, HemK family [Desulfovibrio salexigens DSM
           2638]
          Length = 287

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 8/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  F  +V  L+  Q+I++ +S +D  +       + R    E    ILG ++F+     
Sbjct: 29  AQLFAEKVFDLNRVQLIMELESSVDTEKAAEFDALVKRRASGEPAAYILGVKEFFGFDFK 88

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE +V+             D     D GTG+G + + + K  P  +G+ 
Sbjct: 89  VGPGVLIPRPETEEIVEKV----QQLFSTEDEFLFADFGTGSGILAVTVAKLFPKARGIA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +D+S  AL IA+ NA  +GVSER   +++D+   +  +  FD+I++NPPY+    +D + 
Sbjct: 145 LDLSPAALAIAQDNARLHGVSERVLFVRADFNEPLLADAKFDLILANPPYLCEAELDEIS 204

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV +F+P  +L  G DG    +  A  ++  L + G   +EIGY Q      IF+S   
Sbjct: 205 YEVAEFEPVSALVSGPDGDEDIKGSAPRIASALKQGGTVFMEIGYLQGKVAHSIFDSCSE 264

Query: 245 F--LVNAFKDYGGNDRVLLFCR 264
           F   V   KD   +DRV++  +
Sbjct: 265 FSGCVEVQKDLSEHDRVVVAKK 286


>gi|329939827|ref|ZP_08289128.1| methylase [Streptomyces griseoaurantiacus M045]
 gi|329301397|gb|EGG45292.1| methylase [Streptomyces griseoaurantiacus M045]
          Length = 279

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 107/263 (40%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   Q+    D+  D R        + R    E +  I G   F  + L
Sbjct: 24  DAEELAAFVHGVKRGQLHTVKDTDFDAR----YWEVVARREAREPLQHITGRAFFRYLEL 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  +  
Sbjct: 80  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRSRVH 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  A E A+ N        R +  Q +    F  ++G  D++VSNPPYI     + 
Sbjct: 138 AVELSEDAHEWARKNME----GSRVELRQGNALTAFPDLDGQVDLVVSNPPYIPLTEWEY 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R +     R L   G+  VE    Q   V  IF E 
Sbjct: 194 VAPEARDHDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFAEE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +         D     R     +
Sbjct: 254 KGWADAADHPDLNNRPRFATARK 276


>gi|217978069|ref|YP_002362216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocella silvestris BL2]
 gi|217503445|gb|ACK50854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocella silvestris BL2]
          Length = 296

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 130/264 (49%), Gaps = 6/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   LC   GL    ++ DP + L  R    L     R L  E   RILG R+F+ 
Sbjct: 32  ADLDARLLLCAALGLDHAGLLRDPGAPLGARGAQALERMAARRLAREPTSRILGAREFWG 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  L     +PRP+TE LV+  L       E     RILDLG G+GA+  ALL   P  
Sbjct: 92  ARFHLGPAALDPRPDTETLVEVVLDAV--GAETGRAWRILDLGVGSGALLCALLASLPNA 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
            GVGVD++  A  IA  N    G+  R   + +DW + +E      FD+IVSNPPYI   
Sbjct: 150 FGVGVDLAPAACAIADRNLAAQGLQGRGKLICADWAAPLEARSAARFDIIVSNPPYISRG 209

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  EVR +DP ++LDGG DGL  YR +    +R L  +G  ++EIG  Q  DV  +
Sbjct: 210 DIARLEPEVRIYDPLLALDGGEDGLDAYRAVIPTAARLLAPEGFVALEIGQGQGKDVDAL 269

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
                    N   D GG +R++L 
Sbjct: 270 LRDASFSARNFRLDLGGVERIILA 293


>gi|258542229|ref|YP_003187662.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01]
 gi|256633307|dbj|BAH99282.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-01]
 gi|256636366|dbj|BAI02335.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-03]
 gi|256639419|dbj|BAI05381.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-07]
 gi|256642475|dbj|BAI08430.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-22]
 gi|256645530|dbj|BAI11478.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-26]
 gi|256648583|dbj|BAI14524.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-32]
 gi|256651636|dbj|BAI17570.1| modification methylase HemK [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654627|dbj|BAI20554.1| modification methylase HemK [Acetobacter pasteurianus IFO 3283-12]
          Length = 292

 Score =  238 bits (607), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 139/264 (52%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L     L+  Q++    +     + FF  + + R   HE    I G + F++
Sbjct: 32  PRREARLLLIHALSLTPEQLLARSPTENVPSEPFF--SYVNRRAAHEPFAYITGSKGFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  +  PR +TE L+ S L +   R ++   + ILDLGTGTG + LA L E P  
Sbjct: 90  LDLAVSPASLVPRGDTETLITSLLEY---RPDQTAALNILDLGTGTGCLLLAALAEYPKA 146

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
            GVGVDI+ +A  +A +NA    +S+R   + ++W +++  +  FDV++SNPPYI +  +
Sbjct: 147 HGVGVDINPQAAILAHANAQRCCMSDRALFMAAEWDAALVPDMRFDVVLSNPPYIPTSDL 206

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR+ +P  +LDGG DGL+ YR I   +   L   GL  +EIG  Q+  +  +  
Sbjct: 207 ADLMPEVREHEPVRALDGGDDGLNAYRYICSRLPFLLVDGGLAVLEIGIGQEEALRALAS 266

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +  L +V+   D  G  R ++  +
Sbjct: 267 TNVLRVVDVKADLAGIARAVVLEK 290


>gi|76788736|ref|YP_327822.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis A/HAR-13]
 gi|166154245|ref|YP_001654363.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 434/Bu]
 gi|166155120|ref|YP_001653375.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|237804373|ref|YP_002888527.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis B/TZ1A828/OT]
 gi|301335494|ref|ZP_07223738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis L2tet1]
 gi|47558932|gb|AAT35566.1| class 1 release factor N5-glutamine S-adenosyl-L-methionine
           dependent methyltransferase [Chlamydia trachomatis]
 gi|76167266|gb|AAX50274.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis A/HAR-13]
 gi|165930233|emb|CAP03718.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis 434/Bu]
 gi|165931108|emb|CAP06672.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|231272673|emb|CAX09576.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|296435540|gb|ADH17714.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/9768]
 gi|296437400|gb|ADH19561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/11074]
 gi|297139899|gb|ADH96657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/9301]
          Length = 290

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  DV +IF ++
Sbjct: 193 SDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKQIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KDY   DR    
Sbjct: 253 GIRG-RVLKDYAQLDRFFFL 271


>gi|182435968|ref|YP_001823687.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326776592|ref|ZP_08235857.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces cf. griseus XylebKG-1]
 gi|178464484|dbj|BAG19004.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326656925|gb|EGE41771.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces cf. griseus XylebKG-1]
          Length = 281

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PD+  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHTVPDTDFDAR----YWETIARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           V  ++DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPV--VVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    + D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNAE----GSRVTVHRGDALSALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNKRPRFATARK 278


>gi|332290277|ref|YP_004421129.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330433173|gb|AEC18232.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 293

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 90/266 (33%), Positives = 139/266 (52%), Gaps = 8/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+++ LC VT  S  Q++   ++ L + Q+  L   + R L+ E I  ILG + F+
Sbjct: 27  DAKIDANALLCFVTEKSKAQIMAFAETRLSEAQQQRLELLLQRRLQGEPIAYILGEKGFW 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
           ++ L +S  T  PR +TE LV++AL+  L        + ILDLGTGTGA+ LAL     +
Sbjct: 87  SLDLLVSPVTLIPRSDTECLVETALS-LLQHYSNEAALSILDLGTGTGAIALALAAELTQ 145

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
           +   ++ +GVD   +++ +AK N   N ++   + +QSDWFSS+    FD+IVSNPPYI 
Sbjct: 146 QKRDYRIIGVDRVAESVLLAKQNEQRNHLT-NVEFMQSDWFSSLPPQKFDLIVSNPPYIA 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +VR F+P  +L    +GL+    I +  +  +   G   +E G+ Q   V 
Sbjct: 205 ENDPHLKQGDVR-FEPLSALVAKKEGLADIERIIEQATTFMKTGGYLLIEHGWQQAEAVQ 263

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
            +F+      V    DYGGN RV   
Sbjct: 264 ALFKRYNWCAVRTVLDYGGNQRVTYA 289


>gi|227495019|ref|ZP_03925335.1| polypeptide chain release factor methyltransferase [Actinomyces
           coleocanis DSM 15436]
 gi|226831471|gb|EEH63854.1| polypeptide chain release factor methyltransferase [Actinomyces
           coleocanis DSM 15436]
          Length = 280

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 109/268 (40%), Gaps = 18/268 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      +         + P   LD  Q+  +   + R    E +  ILG   FY 
Sbjct: 22  AENDARLLFEHILQAPR---YIWPG-ELDGDQQQLIEEMVTRRCNREPLAYILGKMWFYG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      F  RPETE LV++AL +     +  + +  LDL +G+GA+ LAL    P +
Sbjct: 78  LELKAEPGVFCVRPETETLVETALNWGSSESKTAENLEALDLCSGSGAIALALQANLPNW 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFD-----TLQSDWFSSVEGLFDVIVSNPPYIES 177
           +  G++ S  AL  A+ NA   G+  RF+      +   W S       ++VSNPPYI  
Sbjct: 138 QVTGLEQSSTALGNAQENAEKLGLPVRFEQGDATVVNPQWRS----KMSLVVSNPPYIPP 193

Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                L  E   ++P  +L G G DG+     I +    +L   GL  +E    Q    V
Sbjct: 194 R---TLPAE-TTYEPAAALWGFGEDGMEIPAKIIEVAWEYLLPGGLFLMEHDDIQGEATV 249

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I        V    D    DR L   +
Sbjct: 250 AIARKLGFSEVQTRVDLNNRDRFLYARK 277


>gi|227544507|ref|ZP_03974556.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300909305|ref|ZP_07126766.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
           SD2112]
 gi|112943598|gb|ABI26315.1| modification methylase HemK [Lactobacillus reuteri]
 gi|227185530|gb|EEI65601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri CF48-3A]
 gi|300893170|gb|EFK86529.1| protein-(glutamine-N5) methyltransferase [Lactobacillus reuteri
           SD2112]
          Length = 288

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 111/257 (43%), Gaps = 8/257 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L +  G  +  +++     +   +  +  +AI R L HE    I+G   FY     +
Sbjct: 31  QFLLQQSHGWDATHLLLHNRDEMPADEVDWWKDAITRLLNHEPAQYIVGQAPFYGRTFKV 90

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   P  ET  L+D  L     R      +R+LDLGTG+G + + L  E P +     
Sbjct: 91  NKNVLIPEAETAELIDWVLQEMPSR-----PLRVLDLGTGSGVIGITLALERPNWHVSLS 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL IA+ N     +      ++SD F +++  +D+IV+NPPYI+      +   V
Sbjct: 146 DISPAALAIAQENMAKFNLE--LPLIKSDLFENIDQQYDLIVTNPPYIDPDDTGEIDQAV 203

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFL 246
            + +P ++L     GL  Y  +     ++L   G    E GY+Q+  +  +     +   
Sbjct: 204 LENEPALALFASEHGLGFYHRLFKQAGQYLTTTGQIFGETGYDQEESIQELLHQTDEHAQ 263

Query: 247 VNAFKDYGGNDRVLLFC 263
           +    D  G  R++   
Sbjct: 264 ICPRHDVAGKMRMIHAW 280


>gi|255506596|ref|ZP_05382235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis D(s)2923]
 gi|289525069|emb|CBJ14539.1| peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis Sweden2]
 gi|296434609|gb|ADH16787.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis E/150]
 gi|296438327|gb|ADH20480.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis E/11023]
          Length = 290

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  DV +IF ++
Sbjct: 193 SDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKKIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KDY   DR    
Sbjct: 253 GIRG-RVLKDYAQLDRFFFL 271


>gi|323138797|ref|ZP_08073861.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocystis sp. ATCC 49242]
 gi|322395945|gb|EFX98482.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylocystis sp. ATCC 49242]
          Length = 298

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 2/247 (0%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S  ++ + P + L +     L++   R    E + RILG R F+ + L ++ D  +PRP+
Sbjct: 49  SRLELAMRPQAPLAEEHADALSHYAARRAAREPVSRILGERGFWTLDLLVAPDVLDPRPD 108

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE L+++ L   L   ++ + + ILDLGTG+GA+  ALL E P  + V VD+S +A   A
Sbjct: 109 TETLIETTLD--LIGEKRNEPLSILDLGTGSGAIVCALLSELPRARAVAVDLSPQACAAA 166

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            +N    G S R   ++  W +++   FD+IVSNPPY+ +  +  L  EVR  DP ++LD
Sbjct: 167 ANNLARCGFSNRASVMRGRWAAALSERFDIIVSNPPYVRAGEIPQLDPEVRLHDPALALD 226

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           GGIDGL  YR I D + R +  DGL + E+G +Q V V  +  ++   +    +D GG++
Sbjct: 227 GGIDGLDCYREIIDDLPRLVADDGLVAFEVGSDQAVSVASLLGAQGFGVERVGRDLGGHE 286

Query: 258 RVLLFCR 264
           RV+   R
Sbjct: 287 RVVAARR 293


>gi|259649484|dbj|BAI41646.1| methylase [Lactobacillus rhamnosus GG]
          Length = 261

 Score =  237 bits (606), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 9/255 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+     + D         + R    E    I G   F+     
Sbjct: 11  ARYVLMTRADWTPSQLILHRQDPMPDAAWRQFQADVARLANFEPAQYITGQAPFFGTMFA 70

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P      
Sbjct: 71  VTPAVLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTL 124

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            ++S  AL +AK NA           + SD F+ + G FD +V+N PYI       +   
Sbjct: 125 SEVSPSALAVAKHNAAA--QKVNVHFVTSDLFNHLPGRFDFVVTNLPYIAPEETSVMDQS 182

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLF 245
              ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F E     
Sbjct: 183 TLRYEPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLFAEKLPQA 242

Query: 246 LVNAFKDYGGNDRVL 260
                +D  G+ R++
Sbjct: 243 QATFRRDMAGHPRMV 257


>gi|255532070|ref|YP_003092442.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
 gi|255345054|gb|ACU04380.1| modification methylase, HemK family [Pedobacter heparinus DSM 2366]
          Length = 288

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 6/267 (2%)

Query: 2   QALRDSHSFLC--RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           +   D+   +    V        I+     LD ++ F L N +      + +  +LG   
Sbjct: 20  EEEADAIFLMAIGHVLQYKRTDYILRKTEELDSKELFILQNILTELQSGKPLQYVLGETV 79

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY +   L      PRPETE LV   L  +         +R++D+GTG+G + ++L K  
Sbjct: 80  FYGLPFKLGPSVLIPRPETEELVAWVLESTALEAVTGAALRLIDIGTGSGCIAISLKKNF 139

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
           P  +   +D+S  A++IA SNA+ N V      +Q+D    + +  FDV+VSNPPYI   
Sbjct: 140 PEAEVSALDVSEAAIDIAGSNALLNEVD--IKFIQADIREFTTKQKFDVVVSNPPYITLK 197

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             + +   V + +P ++L       L  Y  IAD     L+  GL   EI  +   + V 
Sbjct: 198 EKEQMQDHVLNHEPHLALFVSNEAPLVFYEAIADFAWTTLSGRGLLFFEINEHLGKETVE 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + E++    +   KD  G DR++   R
Sbjct: 258 LLEAKSFTDIILKKDMQGKDRMIRCRR 284


>gi|258508167|ref|YP_003170918.1| modification methylase HemK [Lactobacillus rhamnosus GG]
 gi|257148094|emb|CAR87067.1| Modification methylase HemK protein [Lactobacillus rhamnosus GG]
          Length = 276

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 9/255 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+     + D         + R    E    I G   F+     
Sbjct: 26  ARYVLMTRADWTPSQLILHRQDPMPDAAWRQFQADVARLANFEPAQYITGQAPFFGTMFA 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            ++S  AL +AK NA           + SD F+ + G FD +V+N PYI       +   
Sbjct: 140 SEVSPSALAVAKHNAAA--QKVNVHFVTSDLFNHLPGRFDFVVTNLPYIAPEETSVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLF 245
              ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F E     
Sbjct: 198 TLRYEPKLALFADHHGLALFERFVTELPQHLNPHGAAYLEFGYHQEPALRQLFAEKLPQA 257

Query: 246 LVNAFKDYGGNDRVL 260
                +D  G+ R++
Sbjct: 258 QATFRRDMAGHPRMV 272


>gi|294085499|ref|YP_003552259.1| methylase of polypeptide chain release factor [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292665074|gb|ADE40175.1| Methylase of polypeptide chain release factor [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 289

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 91/267 (34%), Positives = 142/267 (53%), Gaps = 9/267 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLD--DRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             +D+   L    G     +   P   +   D ++  L   + R +  E + RI GWR+F
Sbjct: 23  PQQDARLLLGAALGRDDAVL---PHESISFGDMEKALLETLVARRIAREPVSRIRGWREF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLKE 118
           +++R  LSS T +PRP++E++V +A+A +  R  +     +++LDLGTG+G + LA L E
Sbjct: 80  WSLRFALSSATLDPRPDSEIIVATAIAAAKARSIVNPAKQLKLLDLGTGSGCLLLACLSE 139

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P   G+G+DIS  AL  A++NA   G++E+    Q  +   +   G FD+I+ NPPYI 
Sbjct: 140 LPDAVGLGLDISEDALATARNNATALGLAEQSRFYQHSFMDEMSQFGSFDIILCNPPYIP 199

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  EV  ++P  +LDGG DGL  +R +   V   L   G   VEIG  Q+ DV+
Sbjct: 200 AAEITALEPEVARYEPMRALDGGADGLDCWRGLMTVVPSCLAAGGCLVVEIGAGQEDDVI 259

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++ E   +  V   KD  G  R L+F 
Sbjct: 260 QLAEMANMTCVEMHKDLAGITRCLMFR 286


>gi|93005985|ref|YP_580422.1| HemK family modification methylase [Psychrobacter cryohalolentis
           K5]
 gi|92393663|gb|ABE74938.1| modification methylase, HemK family [Psychrobacter cryohalolentis
           K5]
          Length = 308

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 78/271 (28%), Positives = 130/271 (47%), Gaps = 22/271 (8%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
           +L  +    +  +I D    L D +       + +  +   +  + G + F+++   ++ 
Sbjct: 35  WLLYIIDKPALFLITDDSYQLSDVEVERFNVGVTKMQQGTPLAYLTGIQAFWSLDFAVNE 94

Query: 70  DTFEPRPETELLVDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESP---- 120
            T  PRP+TE+LV+  L +     E+      +  R+LDLGTG+G + ++L  E      
Sbjct: 95  HTLIPRPDTEVLVEQVLHWINTANEEFVPNAANNKRLLDLGTGSGCIAISLAHELKLARK 154

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNP 172
                ++ V VD S +AL+IA+ NAV+N V    + + S W+ ++    E LFDVIVSNP
Sbjct: 155 LEPVSWQVVAVDFSLEALKIAQHNAVSNAVD--IEFVHSSWYDALSTQDEHLFDVIVSNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+       GL     +P  +L     GL+    I     ++L   GL ++E G++Q 
Sbjct: 213 PYIDEADEHLAGLLA---EPISALSAPNHGLADIEHIVHHAPQYLKVGGLLAIEHGFDQG 269

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
               ++F       +   KD+GGNDRV L  
Sbjct: 270 HAARQLFADNHFDNIQTIKDFGGNDRVTLGQ 300


>gi|134093471|ref|YP_001098546.1| protein methyltransferase HemK [Herminiimonas arsenicoxydans]
 gi|133737374|emb|CAL60417.1| Protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Herminiimonas arsenicoxydans]
          Length = 276

 Score =  237 bits (605), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 133/256 (51%), Gaps = 10/256 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   +  VT LS  Q+I + + VL+  +   L     R +  E +  +LG R+FY + 
Sbjct: 22  LEARMLIGHVTQLSRVQLITNAERVLNAAEAQQLATLFARRMAGEPMAYLLGEREFYGLS 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +S     PRP+TELLV+ AL     +       R+LD+GTG+GA+ +A+    P    
Sbjct: 82  FQVSPAVLIPRPDTELLVELALQRLPQQ------GRVLDMGTGSGAIAIAIAHARPDAVV 135

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             +D+S  AL +A +    +    R + L+SDWF++++G  FD+IVSNPPYI +      
Sbjct: 136 TALDVSEAALAVASA--NAHRHKARVECLRSDWFAALDGRQFDLIVSNPPYIVAGDRHLS 193

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             ++R F+P  +L    DGLS  R I++  + HL+ DG   +E GY+Q   V  +     
Sbjct: 194 EGDLR-FEPIDALSDHADGLSALRIISEHAADHLSDDGWLLMEHGYDQAAAVRGLLAENG 252

Query: 244 LFLVNAFKDYGGNDRV 259
              V +++D    +RV
Sbjct: 253 FGEVQSWRDLAQIERV 268


>gi|323490904|ref|ZP_08096099.1| HemK-like protein [Planococcus donghaensis MPA1U2]
 gi|323395384|gb|EGA88235.1| HemK-like protein [Planococcus donghaensis MPA1U2]
          Length = 285

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 5/258 (1%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS   +I      + D Q       I +  K   +  + G  +FY  +  
Sbjct: 28  ARILLQHELGLSYSGLIASMRDEISDAQLENFWATIEQHAKGIPVQHLTGTEEFYGRKFR 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +++D   PRPETE L++  L      + K+++  + D+GTG+G + + +  E P      
Sbjct: 88  VNADVLIPRPETEELIEETLQLIERHLVKKELA-LADIGTGSGIIAITMKCELPHANVTA 146

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185
            DIS  ALE A  NA T       D    D    +E   +DVI+SNPPYI       L  
Sbjct: 147 TDISQSALETAAQNAETLNAE--IDFRLGDLTKPIENEKWDVILSNPPYIAYSEAPDLSD 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            VRDF+P  +L    +GL+ Y  +A+   + LNK G+   EIGY Q   V ++ +     
Sbjct: 205 SVRDFEPHHALFADNEGLALYEKMAEQFPKMLNKPGIIGFEIGYQQGKAVEKMLKDAFPD 264

Query: 245 FLVNAFKDYGGNDRVLLF 262
             V   KD   NDR++  
Sbjct: 265 AFVYCKKDINKNDRMVFA 282


>gi|332522646|ref|ZP_08398898.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus porcinus str. Jelinkova 176]
 gi|332313910|gb|EGJ26895.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptococcus porcinus str. Jelinkova 176]
          Length = 276

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 14/254 (5%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
            V   S    ++  +  +       L +   +  +  S   I G   F ++ LT++    
Sbjct: 30  EVKEWSLLDFLLHQNQQVSAEDHVLLKSIFEQLYRGRSPQYITGKAYFRDLILTVNESVL 89

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV   LA +     +R+ +++LD+GTG+GA+ ++L KE P +K V  DIS +
Sbjct: 90  IPRPETEELVALILAEN-----EREDLQLLDIGTGSGAIAISLKKERPTWKVVASDISQE 144

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+++A+ NA    +       QSD FSS+ G FD+IVSNPPYI       +G  V   +P
Sbjct: 145 AIQVAQFNAW--NMETEITFRQSDLFSSLSGKFDIIVSNPPYIAFADKKEVGRNVLVSEP 202

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI----FESRKLFLVN 248
            ++L     GL+ YR+I +    +L+  G    EIGY Q   +  +    F  ++     
Sbjct: 203 HLALFAEEGGLAMYRSILEQAEHYLSPQGKIYFEIGYKQGQALRELVKSTFPEKRF---R 259

Query: 249 AFKDYGGNDRVLLF 262
             +D  G DR+++ 
Sbjct: 260 LKQDCYGKDRMVII 273


>gi|329964683|ref|ZP_08301737.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
           12057]
 gi|328525083|gb|EGF52135.1| protein-(glutamine-N5) methyltransferase [Bacteroides fluxus YIT
           12057]
          Length = 247

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 108/252 (42%), Gaps = 8/252 (3%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
            G S+    +  D +L  ++   L   + R    E I  + G  +F   R  ++     P
Sbjct: 2   LGQSTVDYYLGKDIILSSKEEQELEGILSRLRDFEPIQYVQGGVNFMGHRFRVAPGVLIP 61

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RPETE LV+  L       E     RILD+GTG+G + ++L K  P  + V  D+S +AL
Sbjct: 62  RPETEELVEIMLK------EIPAEARILDVGTGSGCIAVSLSKGLPDARVVAWDVSEEAL 115

Query: 135 EIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            IA+ N      S RF          S E  +DVIVSNPPY+       +   V D++P 
Sbjct: 116 AIARGNNEALQASVRFALCNVLTCRPSREDRYDVIVSNPPYVLEKERREMERNVLDWEPS 175

Query: 194 ISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++L     D L  YR IA+     L   G    EI        V +   +        KD
Sbjct: 176 LALFVPDTDPLRFYRRIAELGREMLVAGGRLYFEINRAFGEATVAMLCEQGYANARILKD 235

Query: 253 YGGNDRVLLFCR 264
             GNDR +L  R
Sbjct: 236 ISGNDRFVLAER 247


>gi|146328946|ref|YP_001209003.1| HemK family modification methylase [Dichelobacter nodosus VCS1703A]
 gi|146232416|gb|ABQ13394.1| modification methylase, HemK family [Dichelobacter nodosus
           VCS1703A]
          Length = 276

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 13/261 (4%)

Query: 3   ALRDSHSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           AL ++  F  RV  ++   Q   +P+  L   Q   L   ++R  + E    ILG + FY
Sbjct: 20  ALLEARLFAERVLNIAPVRQRYRNPE--LTVPQIAQLNALLLRRARGEPFAYILGNQPFY 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +S     PRPETE LVD+ALA    +I  +D  R++DLGTG+GA+ LA+  E P 
Sbjct: 78  HLDLKVSPAVLIPRPETEQLVDAALA----KIPPQDCYRVIDLGTGSGAIALAIAAERPH 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            + + VD S  AL +A+ NA    ++     + SDW +++ +   D+IVSNPPYI++   
Sbjct: 134 CRVLAVDKSWDALRVAQENARHLQLA-NVHFVLSDWLTAIADARADMIVSNPPYIDAHDE 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-F 239
                    ++P+++L     G +    +     R L  +G   +E G  Q   +     
Sbjct: 193 HL---AALAYEPQMALVSPEHGYADLLHLIAHAGRCLRPNGWLLLEHGNQQAQKLRAFAA 249

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           E      +++ +DY G +R+ 
Sbjct: 250 EQSGWQHIHSLRDYAGWERIT 270


>gi|229917063|ref|YP_002885709.1| modification methylase, HemK family [Exiguobacterium sp. AT1b]
 gi|229468492|gb|ACQ70264.1| modification methylase, HemK family [Exiguobacterium sp. AT1b]
          Length = 286

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/269 (31%), Positives = 125/269 (46%), Gaps = 15/269 (5%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD   +  +L  V  +    ++V     L   +       I R L  E +  ++G  
Sbjct: 17  EAGRDRAAAEWWLIHVLQVDRTGLLVRLSDELSSDEAARFEAGIERLLMGEPVQHVIGHA 76

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++ D   PRPETE L+D  L     ++       I+D+GTG+GA+ + L  E
Sbjct: 77  PFYGRSFEVNRDVLIPRPETEELIDWVLG----QLRHVKDDEIVDVGTGSGAIAITLSLE 132

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
               +   VDIS +A+E+AK NA   G + +F   + D  + + +    V+VSNPPYIE+
Sbjct: 133 L-GVRVQTVDISREAIEVAKRNAAALGATVQF--YEGDGLAPIADHSIRVLVSNPPYIEA 189

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVV 236
             +  L   V  ++P ++L GG DGL  YR +     R L  D      EIGYNQ  DV 
Sbjct: 190 DEL--LDETVVGYEPHLALFGGKDGLDMYRQLIAESVRVLRADWHLIAFEIGYNQGQDVK 247

Query: 237 RIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +  E          KD  G DR++   R
Sbjct: 248 SLLSERYPEAETGILKDINGKDRIVYAVR 276


>gi|297202391|ref|ZP_06919788.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
 gi|197710088|gb|EDY54122.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
          Length = 281

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 109/266 (40%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++    D+  D R        I R  + E +  I G   F  
Sbjct: 23  PRNDAEELAAFVHGVKRGELHSVKDADFDAR----YWETIARREQREPLQHITGLAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  
Sbjct: 79  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVI 179
           +   V++S +AL   + N        R D  Q    D F  ++G  D+++SNPPYI    
Sbjct: 137 RVHAVELSEEALRWTRKNVE----GSRVDLRQGNALDAFRDLDGHVDLVISNPPYIPLTE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD+DP ++L  G DGL   R +     R L   G+  +E    Q   V  IF
Sbjct: 193 WEYVAPEARDYDPELALFSGEDGLDLIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIF 252

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     R
Sbjct: 253 TEERGWADAADHPDLNNRPRFATARR 278


>gi|296116160|ref|ZP_06834778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977266|gb|EFG84026.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 291

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 5/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L       +    +     ++          + R   HE +  + G   F++
Sbjct: 31  PRREARLLLAHAL--GTDLGGLLLRDWIEKGALAHFHTLLERRSLHEPLSYLTGRAGFWS 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PR +TE LV++ L     R ++ D+  ILDLGTGTG + LA L+E P  
Sbjct: 89  MTLDVSPATLIPRADTETLVEALLEL---RPDRTDISTILDLGTGTGCLLLAALQEYPQA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+GVD+S  A  +A  NA   G+S+R + +  +W  ++ G FDV+ SNPPYI    +  
Sbjct: 146 WGLGVDLSPDAARLALGNARNVGLSDRCNIICGNWAQAITGRFDVVFSNPPYIPHADLSG 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +VRD +P  +LDGG DGL  YR +   + R L   GL  VE+G  Q   V  +    
Sbjct: 206 LMPDVRDHEPHRALDGGDDGLVCYRILMQSLPRLLKPRGLGIVELGIGQDHSVPALARDA 265

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            + +V    D GG  R L+  R
Sbjct: 266 GMDIVAIRPDLGGVGRALIVRR 287


>gi|291460254|ref|ZP_06599644.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417201|gb|EFE90920.1| protein-(glutamine-N5) methyltransferase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 298

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/275 (30%), Positives = 130/275 (47%), Gaps = 27/275 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVL-----DDRQRFF----LTNAIVRSLKHESIHRILG 56
           D+   L     L +   ++   + L     D+R+R          +        + ++LG
Sbjct: 25  DARQLLFHSFSLDAPAYLMKSSAELSSLFPDEREREERTADFRRLLSERASRIPLQQLLG 84

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + DF+ +R  +S     PR +TE+LV+ ALA S  +         LDL TG+G V ++LL
Sbjct: 85  YTDFFGLRFRVSEAVLSPRQDTEILVEEALAESTGK-------HALDLCTGSGCVGISLL 137

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDWFSSVEGL--------F 165
               F   +  D+S  AL  A+ NA      E   R   L+SD F  +           F
Sbjct: 138 YYGEFESMLLTDLSAPALRKAEENAERLLPPEKRARLFLLRSDLFQRISEYEREKGIQGF 197

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+I+SNPPYI    ++ L  EV + +PR++LDGG DGL  YR IA    +HL   G   +
Sbjct: 198 DLILSNPPYIRRGEIESLEPEVSEHEPRMALDGGEDGLFFYREIAREAPKHLRPGGRICL 257

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           EIG+++  +V  +  S     ++  +D  G DRVL
Sbjct: 258 EIGFDEAEEVSALLLSAGFSELSLRRDLSGKDRVL 292


>gi|269128127|ref|YP_003301497.1| modification methylase, HemK family [Thermomonospora curvata DSM
           43183]
 gi|268313085|gb|ACY99459.1| modification methylase, HemK family [Thermomonospora curvata DSM
           43183]
          Length = 286

 Score =  236 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 121/266 (45%), Gaps = 11/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++   PDS  D R        + R    E +  I G   F  
Sbjct: 23  PRADAEELAAAVHGVKRSELHTVPDSAFDAR----FWEGVARREAGEPLQHITGRAFFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++V  AL  +L +++ RD + ++DLGTG+GA+ L++++E+P  
Sbjct: 79  LELKVGPGVFIPRPETEVMVGWALE-TLHQMDVRDPL-VVDLGTGSGAIALSIVQEAPSA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179
           +   V+    A   A  N     +  R     +D+  +++   G  D+++SNPPYI    
Sbjct: 137 RVHAVEKDPTAFVYATRNVEELDLRGRVRLHLADFADALQELNGTVDLVISNPPYIPMSE 196

Query: 180 VDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            + +  EVRD DP  +L  GG DGL   RT+     R L   G  +VE    Q   V  +
Sbjct: 197 WEYVPPEVRDHDPAAALWGGGDDGLDAIRTVERTARRLLRPGGHVAVEHSDMQGNAVYWV 256

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F E      V   +D    DR +   
Sbjct: 257 FAEEHGWRDVRNHRDLTDRDRFVTAR 282


>gi|50954443|ref|YP_061731.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950925|gb|AAT88626.1| methyltransferase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 292

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 109/263 (41%), Gaps = 7/263 (2%)

Query: 6   DSHSFLCRVTGLSS--HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   +  V G+S    Q +   ++ L       L +   R    E +  I G   F ++
Sbjct: 32  DAELLIGHVLGVSRGRVQALTVLEATLGPVDAARLRDLAQRRAAREPVQHITGRAPFRSL 91

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETE +   A+           +  + DLGTG+GA+ LAL  E P  +
Sbjct: 92  ELAVGPGVFVPRPETEQVAQFAIDALRAVPSPEPI--VADLGTGSGAIALALATEVPHAR 149

Query: 124 GVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V+ S +A   ++ N    G           +D    ++G  DV++SNPPY+    V 
Sbjct: 150 VFAVENSPEAFVWSRRNIDAAGAPNVRAVFADLADALPDLDGAVDVVISNPPYVPDAAVP 209

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               EVR FDP ++L GG DGL   RTI+    R L   G   +E G  Q   V  +  +
Sbjct: 210 R-DPEVRLFDPHVALYGGEDGLDVVRTISRVAWRLLRSGGALVLEHGERQGAAVRDLLTA 268

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                    +D    DR     R
Sbjct: 269 DGWRAAATHRDLTARDRATTATR 291


>gi|302554165|ref|ZP_07306507.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
 gi|302471783|gb|EFL34876.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
          Length = 281

 Score =  236 bits (603), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHSVRDSDFDAR----YWEVIARREAREPLQHITGRAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  AL+  + N        R +  Q +    F  ++G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALQWTRKNVE----GSRVELRQGNALTAFPDLDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD+DP ++L  G DGL   R +     R L   G+  VE    Q   V  IF E 
Sbjct: 196 VAPEARDYDPDMALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|319955750|ref|YP_004167017.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Cellulophaga algicola DSM 14237]
 gi|319424410|gb|ADV51519.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulophaga algicola DSM 14237]
          Length = 283

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 8/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +    GL    + ++P+ ++       L  A+ +   H  +  I+G  +F ++   ++
Sbjct: 29  MLIEHYLGLQRFVLAMEPNLIVAKEDESPLFEALSKLKLHVPVQYIIGKTEFMDLEFIVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV   L        K   ++ILD+GTG+G + ++L K  P  K   +D
Sbjct: 89  EHVLIPRPETEELVRWILGDIEDHHSK---LKILDIGTGSGCIPISLAKHLPNSKVYTLD 145

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S KA+ +AK NA  N V+   D +Q       +++  FD+IVSNPPY+  +    +   
Sbjct: 146 VSGKAIAVAKQNARLNKVA--IDFIQESILDIETLQEEFDIIVSNPPYVRELEKAAMNAN 203

Query: 187 VRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V  ++P ++L     + L  Y+ I D  + +L K G    EI      +   +       
Sbjct: 204 VLKYEPGLALFVADNNPLLFYKKITDFAAHNLVKKGKLYFEINQYLGKETELLLGEHNFS 263

Query: 246 LVNAFKDYGGNDRVL 260
            +   +D  GNDR+L
Sbjct: 264 DIELRQDVFGNDRML 278


>gi|226947361|ref|YP_002802452.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A2 str. Kyoto]
 gi|226841044|gb|ACO83710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Clostridium botulinum A2 str. Kyoto]
          Length = 283

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 7/262 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L ++       ++ +PD  + + ++      I        I  ILG  +F  +  
Sbjct: 25  DTQLLLGKILKKDRLFILTNPDYHIKEEEKEKYFQLIDLRKNKMPIKYILGTTEFMRLDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRP+TE+LV++ L      I+ ++  +I D+  G+G + + +       + +
Sbjct: 85  NIKKGVLIPRPDTEILVETVLE----EIKNKNYKQICDVCCGSGIIGITIGYTLNNTEII 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DI        K N + + + +R   L+SD  +     +  FD+IVSNPPYI   +++ 
Sbjct: 141 CYDIEDIPYNTTKENILKHNLQDRVKALKSDLLTEAIKEKRRFDLIVSNPPYIREDVIET 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V+ ++P  +L GG DGL  Y  I       LN  G  + EIGY+QK+ V  I    
Sbjct: 201 LMDDVKKYEPFEALCGGKDGLFFYEGIIKQSLEVLNDGGTIAFEIGYDQKIQVSHILNEY 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V   KD  G DRV+   +
Sbjct: 261 GFKDVLCIKDLAGKDRVIKARK 282


>gi|226307403|ref|YP_002767363.1| protein methyltransferase [Rhodococcus erythropolis PR4]
 gi|226186520|dbj|BAH34624.1| protein methyltransferase [Rhodococcus erythropolis PR4]
          Length = 310

 Score =  236 bits (603), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 14/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++ + P  ++D          + + +K   +  I+G     N+ +
Sbjct: 28  DAELLASHLLGVERTRLGLIP--LVDPEVIAAFDELVAQRVKRIPLQHIIGVASMGNIDV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL+  AL+F      K  V  +LDL TG+G + L++ +  P     
Sbjct: 86  AVGPGVFIPRPETELLMGWALSFLEGCGSKPPV--VLDLCTGSGVLALSIAEARPDAVVH 143

Query: 126 GVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V+    AL  A+ NA     +        + D    +    +EG  D++VSNPPYI   
Sbjct: 144 AVEKEPAALAWARRNAADREAAGDKPIHLHQGDVTDRNLLPGLEGGVDLVVSNPPYIPEG 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  EV D+DP  +L GG DGLS  + +   ++R L   G   +E        V  +
Sbjct: 204 --AQLQPEVMDYDPHTALFGGTDGLSVIKPMISNIARWLRIGGAAGIEHDDTNGDGVAAL 261

Query: 239 FESRKLF-LVNAFKDYGGNDRVLLFCR 264
           F +R++F  V    D  G  R ++  R
Sbjct: 262 FSARRVFGDVAQHPDLAGRPRFVVARR 288


>gi|259503693|ref|ZP_05746595.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM
           16041]
 gi|259168325|gb|EEW52820.1| protein-(glutamine-N5) methyltransferase [Lactobacillus antri DSM
           16041]
          Length = 290

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 8/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L +     +  +++     +   +  +   A+ + L H     I+G   FY  +  +
Sbjct: 31  QFLLEQRHDWDTTHLLLHNREQMPADEITWFQRAVAQLLNHVPAQYIVGQTSFYGRQFKV 90

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     P  ET  LV+  LA     +     +R+LDLGTG+G + + L  E P +     
Sbjct: 91  TPAVLVPEAETAELVEWVLA----ALPADRELRVLDLGTGSGVIGITLALERPCWSVTLS 146

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL +A+ NA  + ++     ++SD F+++ +  +DVIV+NPPYI+      +   
Sbjct: 147 DISPAALAVARENAQRHQLA--LPLVESDLFANLADQRYDVIVTNPPYIDPAATALMDQA 204

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V + +PR++L     GL  Y  + +   RHL   G    E GY+Q+  +  + +   +  
Sbjct: 205 VLENEPRVALFADEHGLGFYHRLFEQAGRHLRPSGQLFGETGYDQEQSIQALLKRCDQQA 264

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +    D  G  R++   
Sbjct: 265 RMAVRHDVAGKMRMIHAW 282


>gi|290957364|ref|YP_003488546.1| methylase [Streptomyces scabiei 87.22]
 gi|260646890|emb|CBG69987.1| putative methylase [Streptomyces scabiei 87.22]
          Length = 281

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 109/266 (40%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++    +S  D R        I R  + E +  I G   F  
Sbjct: 23  PRNDAEELAAFVHGVKRGELHTVKNSDFDAR----YWEVIARREQREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  I+DL TG+GA+ LAL +E P  
Sbjct: 79  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALALAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVI 179
           +   V++S  AL   + N        R D  Q    D F  ++G  D++VSNPPYI    
Sbjct: 137 RVHAVELSEDALTWTRKNMA----GSRVDLRQGNALDAFRDLDGQVDLVVSNPPYIPLTE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD+DP ++L  G DGL   R +     R L   G+  +E    Q   V  IF
Sbjct: 193 WEYVAPEARDYDPELALFSGEDGLELIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIF 252

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E R         D     R     +
Sbjct: 253 TEERGWADAADHPDLNNRPRFATARK 278


>gi|297585439|ref|YP_003701219.1| protein-(glutamine-N5) methyltransferase [Bacillus selenitireducens
           MLS10]
 gi|297143896|gb|ADI00654.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus selenitireducens MLS10]
          Length = 307

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 20/272 (7%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +   TG S  ++  +  + L+       +  I ++     +  + G   FY  R  
Sbjct: 32  ARILMMHHTGWSRSRLFAEMRTPLERSLDEAFSADIQKAAAGIPVQHLTGEEVFYGRRFR 91

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRI------EKRDVVRILDLGTGTGAVCLALLKESP 120
           ++ D   PRPETE LV++        +      + ++ + I+D+GTG+G + + L  E P
Sbjct: 92  VNRDVLIPRPETEELVEAVKERLSTGLSTSWDADSQEELGIVDIGTGSGILAITLALEIP 151

Query: 121 FF-------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVS 170
            +       + +  DIS  ALE+A+ NA  +        L   +   +        +IVS
Sbjct: 152 GWLKGNQATRVIATDISRAALEMARINAEAHEAP--VTFLAGSYLDPIIESGIRPRLIVS 209

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGY 229
           NPPYI       +   V++ +P  +L    +GL+ YRT+ + + R L+ +G     EIG+
Sbjct: 210 NPPYIPESDQAMMKDNVKNHEPHTALFAEENGLAAYRTMIEDLHRVLHPEGTWLFFEIGW 269

Query: 230 NQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           NQ   V  +   R         +D  GN+R++
Sbjct: 270 NQGDAVRTMITDRFPESSPEVIRDINGNERIV 301


>gi|15604742|ref|NP_219526.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis D/UW-3/CX]
 gi|255310825|ref|ZP_05353395.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 6276]
 gi|255317125|ref|ZP_05358371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis 6276s]
 gi|3328414|gb|AAC67614.1| N6-adenine-specific DNA methylase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748155|gb|ADI50701.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis D-EC]
 gi|297749035|gb|ADI51713.1| Peptide release factor-glutamine N5-methyltransferase [Chlamydia
           trachomatis D-LC]
          Length = 290

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  D+ +IF ++
Sbjct: 193 SDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDIKQIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KDY   DR    
Sbjct: 253 GIRG-RVLKDYAQLDRFFFL 271


>gi|148543688|ref|YP_001271058.1| HemK family modification methylase [Lactobacillus reuteri DSM
           20016]
 gi|184153098|ref|YP_001841439.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
           1112]
 gi|227363333|ref|ZP_03847462.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|325682059|ref|ZP_08161577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM4-1A]
 gi|148530722|gb|ABQ82721.1| modification methylase, HemK family [Lactobacillus reuteri DSM
           20016]
 gi|183224442|dbj|BAG24959.1| putative protoporphyrinogen oxidase [Lactobacillus reuteri JCM
           1112]
 gi|227071640|gb|EEI09934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM2-3]
 gi|324978703|gb|EGC15652.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus reuteri MM4-1A]
          Length = 288

 Score =  236 bits (602), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 62/257 (24%), Positives = 111/257 (43%), Gaps = 8/257 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L +  G  +  +++     +   +  +  +AI R L HE    I+G   FY     +
Sbjct: 31  QFLLQQSHGWDATHLLLHNRDEMPADEVDWWKDAITRLLNHEPAQYIVGQAPFYGRTFKV 90

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   P  ET  L+D  L     R      +++LDLGTG+G + + L  E P +     
Sbjct: 91  NKNVLIPEAETAELIDWVLQEMPSR-----PLKVLDLGTGSGVIGITLALERPNWHVSLS 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL +A+ N     +      ++SD F +++  +D+IV+NPPYI+      +   V
Sbjct: 146 DISPAALAVAQENMAKFNLE--LPLIKSDLFENIDQQYDLIVTNPPYIDPDDTGEIDQAV 203

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFL 246
            + +P ++L     GL  Y  +     ++L   G    E GY+Q+  +  +     +   
Sbjct: 204 LENEPALALFANERGLGFYHRLFKQAGQYLTTTGQIFGETGYDQEESIQELLHQTDEHAQ 263

Query: 247 VNAFKDYGGNDRVLLFC 263
           +    D  G  R++   
Sbjct: 264 ICPRHDVAGKMRMIHAW 280


>gi|296126693|ref|YP_003633945.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachyspira murdochii DSM 12563]
 gi|296018509|gb|ADG71746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachyspira murdochii DSM 12563]
          Length = 287

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 11/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +  + +     +S  ++I +    L + +   + + I R L +E +  I   ++FY    
Sbjct: 27  EVSAIIMHTLNISKTKLISEAIRELKEGEIKQIESFIERRLNYEPLAYITNKKEFYGFDF 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESPF 121
            + S+   PRPETE ++D  L ++    + +D + I D+ +G+G + + L K    ++  
Sbjct: 87  YVDSNVLIPRPETEEIIDLVLDYT----KDKDNISICDVCSGSGNIAVTLKKLFIEQNKN 142

Query: 122 FKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                ++IS  A EI   NA    G  +  + + +D    + E  FD+IVSN PY+    
Sbjct: 143 IDITAIEISNGAAEITNKNAFNILGDEKFINIINADALKYIPEKKFDIIVSNAPYVPLKD 202

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  +  DF+P  +L  G DGL  YR   + +  +L  +G    EIGYNQ   ++ I 
Sbjct: 203 KDSLQKD-LDFEPFNALYSGDDGLDFYRAFLNIIDIYLKDNGAFFFEIGYNQAYSLIDIC 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            +  +      KD  G DR L+
Sbjct: 262 SNLNINNTEVKKDLNGKDRFLV 283


>gi|299821848|ref|ZP_07053736.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601]
 gi|299817513|gb|EFI84749.1| protein-(glutamine-N5) methyltransferase [Listeria grayi DSM 20601]
          Length = 285

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 111/256 (43%), Gaps = 6/256 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +     L+  ++       L+          + R L  E I  IL    F+     +
Sbjct: 28  EIIVETRLQLTRSELWQSHGMPLEQEMYQQCLQDLDRYLAGEPIQYILKTAPFFGYDFYV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            +    PRPETE LV  AL  +    +K    ++LD+ TG+G + + + KE P       
Sbjct: 88  DNHVLIPRPETEELVYKALETA----KKTGFRKVLDICTGSGVIGITMKKELPELTITLS 143

Query: 128 DISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           DIS +AL+++K NA   G   R  +T  +D+F      + +I++NPPYI       +   
Sbjct: 144 DISPEALQVSKKNAQQLGAEVRCIETDVADYFVDNCEKYQLIIANPPYIAEHERLGMSDL 203

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V   +P ++L    +GL+ Y  +   +   +  +    VEIGY Q   V  +F+      
Sbjct: 204 VLKNEPELALFAENNGLAIYEKLVKQLPAIVEANFWIGVEIGYQQGESVRALFQKSFPQV 263

Query: 246 LVNAFKDYGGNDRVLL 261
            V   KD  G DR+++
Sbjct: 264 PVVIHKDINGKDRMVI 279


>gi|117927850|ref|YP_872401.1| HemK family modification methylase [Acidothermus cellulolyticus
           11B]
 gi|117648313|gb|ABK52415.1| modification methylase, HemK family [Acidothermus cellulolyticus
           11B]
          Length = 294

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 8/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G     ++      L   +       + R  +   +  + G   F  + L
Sbjct: 37  DAEQLAAFVLGCPRTHLLAAG--ALPAGRHEVFRQLVARRAQRVPLQHLTGSVGFRRLEL 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE+L    +     R +      ++DL TG+GA+ L++ +E P  +  
Sbjct: 95  AVGPGVFVPRPETEVLAGWCIETL--RADGPAQPLVVDLCTGSGAIALSIAQEVPAARVF 152

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            VD    A   A+ N    G++ R   L +D       ++G  D++V+NPPY+       
Sbjct: 153 AVDDDPVATAWAQRNVAGTGLAGRVVVLCADAAVALPELDGQVDLVVANPPYLAEGDRQL 212

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVRD DP  +L    DGL+    I +   R L   G  +VE G  Q+  VV +F  R
Sbjct: 213 LEPEVRDHDPPRALWSDADGLAGPAMIVEAARRLLRPGGRVAVEHGDGQRAAVVGLF-DR 271

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V A +D  G DR +   R
Sbjct: 272 GWSEVAAHQDLTGRDRFVTARR 293


>gi|330719388|ref|ZP_08313988.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leuconostoc fallax KCTC 3537]
          Length = 292

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 4/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +    L     ++   +  +    + +         I   +    +  +LG   FY 
Sbjct: 31  AQENVDFLLTGALDMNYGTLHANMTRQMPEFLVESWARWISELITGRPVQYVLGTAPFYG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLVD  L       +K   ++ILD+GTG+GA+   +L E    
Sbjct: 91  REFLVDERVLIPRPETELLVDWVLQDLKANSQKE--IKILDIGTGSGAIVETILLEDQRV 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +G+  DIS  AL +A+ NA    + +R    +SD F+ +    FDVI+SNPPYI+    +
Sbjct: 149 QGMAADISTDALTVAQHNAKKFKIRDRISFTESDVFAQIPAMKFDVILSNPPYIDPQDQN 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +   V DF+P I+L     GL+ Y  IA  ++ +L  DG+   EIGY Q   V  +  +
Sbjct: 209 EMDQSVIDFEPDIALYAAHQGLAIYENIAQQLNNYLKDDGIAYFEIGYKQGQAVKDLLRA 268

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
                 ++  +D    DR++
Sbjct: 269 YIPQAQIDLKQDLSKLDRMI 288


>gi|302558380|ref|ZP_07310722.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
 gi|302475998|gb|EFL39091.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
          Length = 281

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    DS  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHAVKDSDFDAR----YWEVIARREAREPLQHITGHAYFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+              I+DL TG+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPC--IVDLCTGSGAIALALAQEVPRSRVY 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + N        R +  Q +    F  ++G  D++++NPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNME----GSRVELRQGNALTAFPDLDGQVDLVITNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD+DP+++L  G DGL   R +     R L   G+  VE    Q   V  IF E 
Sbjct: 196 VAPEARDYDPQLALFSGEDGLDLIRGLERTAHRLLRPGGVVVVEHADTQGGQVPWIFAED 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWTDAADHPDLNNRPRFATARK 278


>gi|188580161|ref|YP_001923606.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium populi BJ001]
 gi|179343659|gb|ACB79071.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylobacterium populi BJ001]
          Length = 296

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 6/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+      +  L+   + +     L       L  A  R L  E + RILG  +F+
Sbjct: 29  DARSDARFLTLHILALTPLDLSLRGREPLGAAGAEALGRAAARRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   LS DT  PRP+TE +V++AL     R  K   +R++DLGTG+G + +ALL E P 
Sbjct: 89  GLPFALSPDTLVPRPDTESVVEAALGLFPERERK---LRLIDLGTGSGCILVALLHERPR 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D +  AL +A++NA  NGV++R   L   W  ++ G FD+IVSNPPYI + ++ 
Sbjct: 146 AYGIGLDRAQGALAVARNNAAANGVADRASFLCGSWLDALSGPFDLIVSNPPYIAAPVIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR---HLNKDGLCSVEIGYNQKVDVVRI 238
            L  EVR  DPR +LDGG DGL  YR I  G++R    L+  G   +EIGY+Q   +  +
Sbjct: 206 TLEPEVRLHDPRAALDGGDDGLDAYRAILAGLARRPGLLSAQGALVLEIGYDQGPALTDL 265

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
            ++     V   +D  GNDRV+   
Sbjct: 266 AQAMGFADVRVGRDLAGNDRVVTLR 290


>gi|282861118|ref|ZP_06270183.1| modification methylase, HemK family [Streptomyces sp. ACTE]
 gi|282563776|gb|EFB69313.1| modification methylase, HemK family [Streptomyces sp. ACTE]
          Length = 281

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 111/263 (42%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++   PD+  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHNVPDADFDAR----YWETVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
           GV++S  AL   + NA       R    + D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 GVELSEDALRWTRKNAE----GSRVTLHRQDALSALPEFDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|205375315|ref|ZP_03228105.1| HemK family modification methylase [Bacillus coahuilensis m4-4]
          Length = 285

 Score =  235 bits (601), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 7/259 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
             +L  +   S  +++ +   +LD+  R      +   +    I  I+G+ +FY     +
Sbjct: 25  ELYLQHLLDWSRSKLLAEQQLLLDESIRELFVKGVKDHVSGIPIQHIIGYEEFYGRCYKV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVG 126
           +     PRPETE LV   L       +       L D+GTG+GA+ +++  E P  +   
Sbjct: 85  NRHVLIPRPETEELVYHTLEKISDLFKATGTALTLADIGTGSGAIAISMKLERPTLQVYA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            D+  +AL++AK NA   G        Q +    +       DV++SNPPYI     + +
Sbjct: 145 SDLHEEALQVAKENADRLGAE--VHFTQGNLLHPIMERGVKLDVMLSNPPYIPEGDKEWM 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V + +P  +L  G DG+  YR   + +   +N  GL   E+G  Q   V  + +   
Sbjct: 203 SEVVTEHEPHSALFAGADGMVLYRQFMEELPLVMNSPGLIGFEVGTGQGEAVRDLLQQTF 262

Query: 243 KLFLVNAFKDYGGNDRVLL 261
                    D  G DR++ 
Sbjct: 263 PSARSKVVFDINGKDRMVF 281


>gi|331001218|ref|ZP_08324844.1| protein-(glutamine-N5) methyltransferase [Parasutterella
           excrementihominis YIT 11859]
 gi|329568945|gb|EGG50741.1| protein-(glutamine-N5) methyltransferase [Parasutterella
           excrementihominis YIT 11859]
          Length = 247

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 13/257 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V G+     ++  D VL   +   L +   +  +   +  +LG ++F+     ++ 
Sbjct: 1   MLEHVCGMDKAAQLIHDDRVLSSDEERKLNDIAKKRSEGVPLPYLLGTQEFFARPFLVNP 60

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR +TE LV+  +              + DLGTG+G +   +  E P       D+
Sbjct: 61  SVLIPRSDTECLVEWLIEHL------PKNALVCDLGTGSGCIAATVALERPDLTVWASDL 114

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEV 187
           S  AL +A++N    G       +Q  W         FD ++SNPPYIE         + 
Sbjct: 115 SESALAVAQANCKALGAD--VKLVQGSWLDPYPAELSFDAVISNPPYIERDDKHL---DA 169

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             ++PR +L    DGL  YRTI   + R   K  L +VE G+NQ   V  IFE       
Sbjct: 170 LRYEPRSALTDESDGLIAYRTILPQIKRKAPKVQLIAVEHGWNQGEAVRSIFEENGFKGS 229

Query: 248 NAFKDYGGNDRVLLFCR 264
             F DYG N R   + +
Sbjct: 230 ATFWDYGNNPRFTTWIK 246


>gi|22299379|ref|NP_682626.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1]
 gi|22295562|dbj|BAC09388.1| protoporphyrinogen IX oxidase [Thermosynechococcus elongatus BP-1]
          Length = 291

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 18/271 (6%)

Query: 4   LRDSHSFLCRVTGLSSHQVIV-------DPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           LR+   FL   TGLS  ++ +            L + Q  +      R      +  ++G
Sbjct: 26  LRELKQFLRAFTGLSPLEITLRRFPPQIHLKLPLTELQERWQRRWQER----VPLQYLIG 81

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              ++++ L ++     PRPETE L+    A   P  ++      LDLGTG+GA+ + L 
Sbjct: 82  VAHWHDLELVVTPSVLIPRPETEELLAVVAATVPPWQQQG---HWLDLGTGSGAIAIGLA 138

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPP 173
           +  P      VD S +ALE+A+ N     + +R      +WF     ++G    IVSNPP
Sbjct: 139 RLFPAALIHAVDCSSEALEVAQVNIQKYALGDRVRCYVGNWFDPIVPLQGQVQGIVSNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI + +V  L  EV+  +P ++LDGG DGL   R I +    +L   G   +E+   Q  
Sbjct: 199 YIPTSVVATLQPEVQYHEPLLALDGGTDGLQAIRQILETAPEYLQPQGWLFIELMATQGK 258

Query: 234 DVVRI-FESRKLFLVNAFKDYGGNDRVLLFC 263
            V  +   ++    V   +D  G+DR LL  
Sbjct: 259 AVAALAMATQAYERVEILRDLSGHDRFLLAQ 289


>gi|154246563|ref|YP_001417521.1| HemK family modification methylase [Xanthobacter autotrophicus Py2]
 gi|154160648|gb|ABS67864.1| modification methylase, HemK family [Xanthobacter autotrophicus
           Py2]
          Length = 286

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 4/261 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L +  G +   +++  D+ +             R    E + RI G R+F+++ 
Sbjct: 28  LDARLLLAQALGCAPGDLLLRADAPVPSEAEVTARAFTKRRAGGEPVARIRGRREFWSLD 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L LS DT  PRP+TE LV++ALA    R      + ILDLGTGTGA+  ALL E P   G
Sbjct: 88  LHLSPDTLVPRPDTETLVEAALAALPDRT---APLSILDLGTGTGAILAALLVECPNATG 144

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VD S  A   A++N   NG++ R   +  DW +++ G FD++VSNPPYI S  +  L 
Sbjct: 145 IAVDRSEGAALTARANLARNGLAARAHVMVGDWGTALAGGFDLVVSNPPYITSSAMLDLP 204

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  DP ++L+ G DGL  Y  IA  + R + + G+  +E+G  Q+  V  +  +  L
Sbjct: 205 AEVRLHDPHLALEAGADGLLAYEAIAADLPRLVRRGGIAVLELGEGQEAAVAALVAAAGL 264

Query: 245 FLVN-AFKDYGGNDRVLLFCR 264
            +   A +D  G  R LL  R
Sbjct: 265 EVAGPARRDLSGIPRALLARR 285


>gi|167838057|ref|ZP_02464916.1| hemK protein [Burkholderia thailandensis MSMB43]
          Length = 251

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 11/250 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            +  Q+I   D  LD            R    E I ++ G R+F+ +   ++ D   PRP
Sbjct: 1   WTRTQLITRADEPLDAAAIERYLALEARRAAGEPIAQLTGAREFFGLEFDVTPDVLIPRP 60

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETELLV++AL      I+      +LDLGTG+GA+ +++    P  +   +D S  AL++
Sbjct: 61  ETELLVETALD----AIDGIASPCVLDLGTGSGAIAVSIASGRPDARVWALDRSATALDV 116

Query: 137 AKSNAVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           A+ NA       R       L+SDW+++++    F V+VSNPPYI          ++R F
Sbjct: 117 ARRNARKLLDPARPGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-F 175

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +PR +L    DGL+  R I  G    +   G   +E GY+Q   V  +  +     V + 
Sbjct: 176 EPRGALTDERDGLAAIRAIVAGAHAFVAPGGALWIEHGYDQAAAVRALLGAAGFADVESL 235

Query: 251 KDYGGNDRVL 260
            D    +R  
Sbjct: 236 ADLASIERAT 245


>gi|256380140|ref|YP_003103800.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
 gi|255924443|gb|ACU39954.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
          Length = 288

 Score =  235 bits (600), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+H     + G+   ++++ P  +++ R    L   + +      +  + G    + V L
Sbjct: 28  DAHLLAAHLLGVPPGKLVLTP--MVEPRVLDELGALVAKRATRVPLQHLTGEAHLWGVDL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELLV+ AL      +       ++DL TG+GA+ L++    P     
Sbjct: 86  AVGPGVFIPRPETELLVEWALN----AVRGAARPVVVDLCTGSGALALSIAHHRPDAVVH 141

Query: 126 GVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V+    AL  A+ NA     +          D       S ++G  D++V NPPY+   
Sbjct: 142 AVEKDPTALSWARRNADARSAAGDTPIRLHHGDVTAPGVLSDLDGAVDLVVCNPPYVP-- 199

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  EV D DPR ++ GG DGL   R +    +R L   G  ++E        V  +
Sbjct: 200 DATEVQPEVADHDPRAAVFGGADGLDVIRHVVTLAARLLKPGGHVAIEHDDTHGEAVPAL 259

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +RK L      +D  G  R     R
Sbjct: 260 LATRKVLADATPHRDLAGRPRFATARR 286


>gi|67921948|ref|ZP_00515464.1| Modification methylase HemK [Crocosphaera watsonii WH 8501]
 gi|67856164|gb|EAM51407.1| Modification methylase HemK [Crocosphaera watsonii WH 8501]
          Length = 301

 Score =  235 bits (600), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 83/272 (30%), Positives = 123/272 (45%), Gaps = 10/272 (3%)

Query: 3   ALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQ--RFFLTNAIVRSLK-HESIHRILGW 57
              +    L  VT L S   ++ +  +      Q     LT    R +K    +  ++G 
Sbjct: 29  PASEVDWLLQTVTPLDSLSLRLGLFKERSQIPLQYPLSKLTELWQRRVKQRVPLQYLVGI 88

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALL 116
             +    L +S D   PRPETEL++D A+  +             LDLGTG+GA+ L L 
Sbjct: 89  TPWRRFSLKVSPDVLIPRPETELIIDFAVEAAKQSPNPDLMFGHWLDLGTGSGAIALGLG 148

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
              P      VD S KAL IA+ NA+  G S R +  Q  W++ +E   G    +VSNPP
Sbjct: 149 DSFPQATIHAVDTSSKALTIAQENAIQAGFSHRINFYQGSWWTPLEQLKGQVSAMVSNPP 208

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI + ++  L  EV++ +P ++LDGG DGL   R + D    +L   G+  VE+   Q  
Sbjct: 209 YIPTSLLSELQPEVQEHEPILALDGGNDGLEAIRYLIDTSPDYLVSGGIFLVEMMAGQGE 268

Query: 234 DVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            V ++ E+      +    D  G  R  L  R
Sbjct: 269 TVRQLLETSGHYQSIQTLPDLAGISRFALAYR 300


>gi|118586289|ref|ZP_01543744.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163]
 gi|118433284|gb|EAV39995.1| protoporphyrinogen oxidase [Oenococcus oeni ATCC BAA-1163]
          Length = 275

 Score =  234 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 6/251 (2%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
             +++ ++++     +  R    L     +    E +  +LG+ +FY    ++      P
Sbjct: 29  LKINNTELLLRFSEQIPARTESKLRLDFDKVQAGEPVQYVLGFANFYGRDFSVGPQVLIP 88

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
             ET  L+D      L  +   D   ILD+GTG+G + + L  E      + VDIS  AL
Sbjct: 89  EVETAELIDHVKNAVL--LPLEDDFSILDIGTGSGNLAITLALELKAKNVLAVDISQDAL 146

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++AK N+     +E    ++SD   +V G+FD+IVSNPPY+++   + +  +V DF+P  
Sbjct: 147 DLAKKNSQNLSATE-VKFIRSDLLENVNGMFDLIVSNPPYVKTGEKE-IDKQVVDFEPHQ 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L  G DG+  +R +     +HL  DG    E+ Y Q  ++  + +       +  FKD 
Sbjct: 205 ALYAGADGMDVFRKMIPETVKHLKPDGYAIFEMDYRQGDEIKSLIKKNFPKAQIEIFKDI 264

Query: 254 GGNDRVLLFCR 264
            G DR  +  R
Sbjct: 265 SGLDRF-IAWR 274


>gi|300867729|ref|ZP_07112374.1| HemK family modification methylase [Oscillatoria sp. PCC 6506]
 gi|300334312|emb|CBN57546.1| HemK family modification methylase [Oscillatoria sp. PCC 6506]
          Length = 311

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 19/281 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGW 57
           +L +   +L  + G+    + +    +   V        L +   R +  +  +  + G 
Sbjct: 30  SLTELEWWLQELAGIDRLSLRLESFKNSPEVTLKLPFTDLKDLWHRRVSEQMPVQYLTGT 89

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCLA 114
             + +  L ++     PRPETEL++D A+  +  R +          +DLGTG+GA+ L 
Sbjct: 90  AYWRHFSLKVTPAVLIPRPETELIIDLAVEAAKHRSQIESLNAKSHWVDLGTGSGAIALG 149

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----------GL 164
           L +         VD S  A+ +A+ NA   G+S+R    Q  W+  +E          G 
Sbjct: 150 LAESLTNTLIHAVDYSSDAIAVARQNADNLGLSDRIQFYQGSWWEPLESAIIDGLPLRGQ 209

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
              +V+NPPYI S +V  L  EV   +P ++LDGG DGL   R +      +L   G+  
Sbjct: 210 ISGMVANPPYIPSSLVPNLQPEVAKHEPHLALDGGSDGLDCIRHLVATAPDYLRSGGVWL 269

Query: 225 VEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           VE+   Q   VV I  S      +  + D  G  R  +  R
Sbjct: 270 VEMMEGQAEVVVEILHSAGSYRDIGIYADLAGIKRFAIAFR 310


>gi|312383011|gb|EFR28253.1| hypothetical protein AND_04041 [Anopheles darlingi]
          Length = 348

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 14/261 (5%)

Query: 10  FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V  LS    V    +S L ++Q   +       L    +  I+   DF ++ L + 
Sbjct: 86  IIAHVLELSGPGDVGDHQNSSLSEQQIRKIEEMCECRLARMPLQYIIREWDFRDLTLKMI 145

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE LV+  L     +++ +     L++G+G+GA+ L++LK  P   G+ +D
Sbjct: 146 PPVFIPRPETEELVELIL----QQMDSQKETFFLEIGSGSGAISLSILKHVPKSSGIAID 201

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCL 183
            S  A E+ + NA   G+  R    +    + +        FD+IVSNPPY+ SV++  L
Sbjct: 202 QSRLACELTRENAAAVGLDSRLRIFKHKLINDLPDTLAGEQFDMIVSNPPYVPSVLLPTL 261

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
             E++ ++   +LDGG DGL+  + I    S+HL KDG+  +E+  +    + +      
Sbjct: 262 EPEIKIYEDLRALDGGNDGLTVIKAILRIASKHLTKDGVLWLEVDISHPPVIEKFLAQHG 321

Query: 243 ---KLFLVNAFKDYGGNDRVL 260
               L  V ++KD    DR +
Sbjct: 322 DKMGLRFVASYKDLFQKDRFV 342


>gi|281424787|ref|ZP_06255700.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302]
 gi|281401157|gb|EFB31988.1| protein-(glutamine-N5) methyltransferase [Prevotella oris F0302]
          Length = 288

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 7/269 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A     + L     L+   +  D    L D ++  +   I R    E +  ++G   F 
Sbjct: 18  EAKAVVRTLLEERFNLTLTDLYTDGLDRLTDDEKARMETLIERLEAGEPVQYVVGKARFC 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP---RIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L    ++        ++  + +R+LD+GTG+G + + L  +
Sbjct: 78  GRDYMVAPGVLIPRPETEMLCKEVISTYNKPYCALQPPEPLRVLDIGTGSGCIAVTLALD 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT---LQSDWFSSVEGLFDVIVSNPPYI 175
                    DIS  +L IA+ NA         +    L  D  +     FD+IVSNPPYI
Sbjct: 138 LWNCTVTAWDISGDSLIIARENAHRLQAHVNLELQDALNPDETALNAPPFDIIVSNPPYI 197

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            +     +   V   +P  +L     D L  YR+IA     HL   G+ + EI      +
Sbjct: 198 CTRESKDMAKHVLAHEPHTALFVPDDDPLLFYRSIAHYGLSHLKPSGMLAFEINPIYAEE 257

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++ E      + + +D  G +R+++  
Sbjct: 258 TCKMLEHMGYEQIESKEDQYGKERIVIAR 286


>gi|328885060|emb|CCA58299.1| Methylase of polypeptide chain release factors [Streptomyces
           venezuelae ATCC 10712]
          Length = 281

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 107/263 (40%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R        + R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHNVKDADFDAR----YWETVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    Q D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSDDALVWTRKNAE----GSRVTVHQGDALSALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP ++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPEMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFNEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                     D     R     +
Sbjct: 256 AGWADAADHPDLNNRPRFATARK 278


>gi|258544632|ref|ZP_05704866.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826]
 gi|258520140|gb|EEV88999.1| protein methyltransferase HemK [Cardiobacterium hominis ATCC 15826]
          Length = 276

 Score =  234 bits (598), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 11/260 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++      +TGLS     +  D  L+  Q+  L     R    E +  +LG + F  
Sbjct: 20  AAIETRHLAAHITGLSPTAQRIH-DPELEPAQQQALDALAARLHAGEPLAYLLGHQPFCG 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PR ++E+LV+ AL      +       ++DLGTG+GA+ LA+    P  
Sbjct: 79  LDLKVSRATLIPRSDSEILVERALH----HLRDLHAPTVIDLGTGSGALALAIATARPDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +    D S +AL IA+ NA  + ++     LQ+DW +       D+I+SNPPYI +    
Sbjct: 135 RITATDQSAEALAIAQENAHAHRLT-NLTFLQADWLAPFAADCADLILSNPPYIAANDPH 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                    +P  +L    DG     TI     R+L  +G   +E G+ Q   +     S
Sbjct: 194 L---AALTHEPPSALIAAADGYRDLYTIMQQAPRNLKPNGWLLMEHGWQQGEKLRARATS 250

Query: 242 RK-LFLVNAFKDYGGNDRVL 260
                 +   +DY G DR+ 
Sbjct: 251 SGDWHNIATHQDYAGRDRIT 270


>gi|159028708|emb|CAO88180.1| hemK [Microcystis aeruginosa PCC 7806]
          Length = 294

 Score =  234 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 120/269 (44%), Gaps = 13/269 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIV-----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++   FL  VT L +  + +          L             R      +  +L    
Sbjct: 29  KEVDIFLQAVTDLDTLSLRLQSFREREKIPLSYSWSEITKRWQKRLQARVPLQYLLESVV 88

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N  L +S D   PRPETELL+D         +   D    +DLGTG+GA+ + L    
Sbjct: 89  WRNFTLKVSPDVLIPRPETELLIDIV----GETVRGDDGGIWVDLGTGSGAIAIGLASIL 144

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176
              +   +D S  AL IAK N +  G ++R    Q  W++ +E   G    +VSNPPYI 
Sbjct: 145 TKAEIYAIDYSPTALAIAKENIIKTGFADRIILKQGSWWTPLEKWKGQISGMVSNPPYIP 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +  L +EVR+ +PR++LDGG DGL+  R +      +L   GL  VE+   Q   V 
Sbjct: 205 SAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGEKVA 264

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           ++ E++     +    D  G DR +L  R
Sbjct: 265 QMLENQGNYRQIQIINDLAGFDRFVLAER 293


>gi|315038003|ref|YP_004031571.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112]
 gi|325956456|ref|YP_004291868.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus 30SC]
 gi|312276136|gb|ADQ58776.1| protoporphyrinogen oxidase [Lactobacillus amylovorus GRL 1112]
 gi|325333021|gb|ADZ06929.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus 30SC]
 gi|327183283|gb|AEA31730.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus amylovorus GRL 1118]
          Length = 281

 Score =  234 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 73/273 (26%), Positives = 119/273 (43%), Gaps = 20/273 (7%)

Query: 2   QALRDSH-----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +A  D         L     L+  +  +  D VL + Q       I +  +  S   ILG
Sbjct: 15  EAAEDVRPEDIDFVLAERLNLTPSEFELKQDMVLSEDQVKQANKDIKKLARGVSPQYILG 74

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +  F   ++ +      PR ETE LV+ AL         +   ++LDLGTG+G + +AL 
Sbjct: 75  YAWFLGYKIMVQRGVLIPRFETEELVEWALKSL------KSGDKVLDLGTGSGCITVALA 128

Query: 117 KES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           KE+             DI+  AL  ++ N +   +     T +++    +E  FD I+SN
Sbjct: 129 KEAEKKGIKDLTLYASDITDSALRTSEENFLNYDLD--VTTRKANVLIGLE-KFDKIISN 185

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI++     +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G+N+
Sbjct: 186 PPYIKTNEKKDMDKNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFNE 245

Query: 232 KVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFC 263
           +  +  +F +    F +   KD  G  R++   
Sbjct: 246 EEQLKELFAKELPDFEIEFRKDMAGKPRMVHGR 278


>gi|56965631|ref|YP_177365.1| methylase, polypeptide chain release factor [Bacillus clausii
           KSM-K16]
 gi|56911877|dbj|BAD66404.1| methylase [Bacillus clausii KSM-K16]
          Length = 288

 Score =  234 bits (598), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 9/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L     +   +++      L +         +   +    +  +LG+  FY     +
Sbjct: 27  EWLLRHHGNMERAKLLASLRDPLPEPVWQAFKQDVAVMVSGVPVQHVLGYEQFYGRTFLV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PRPETE LV   L    P  +      ILD+GTG+GA+ L L  E P       
Sbjct: 87  NGDVLIPRPETEELVALVLNKLKPGPQA-----ILDVGTGSGAIALTLKLERPDCHVTAT 141

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DIS KAL++A+ NA   G        + D  + V G +FDVIVSNPPYI     D L + 
Sbjct: 142 DISEKALDVARENAQRLGAD--ITFAKGDLLAPVAGAVFDVIVSNPPYIPYRDRDSLAVH 199

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFESRKLF 245
           VR+F+P ++L    DGL  YR +A+ V   ++   L +VEIG  Q   V      +    
Sbjct: 200 VREFEPEMALFAEEDGLMFYRRLAEEVPACIHPRSLVAVEIGAGQGEAVQALFAAAFPFA 259

Query: 246 LVNAFKDYGGNDRVLL 261
            +N   D  G DR++ 
Sbjct: 260 DINIVYDINGKDRIVF 275


>gi|116491554|ref|YP_811098.1| methylase of polypeptide chain release factor [Oenococcus oeni
           PSU-1]
 gi|290891159|ref|ZP_06554221.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429]
 gi|116092279|gb|ABJ57433.1| Methylase of polypeptide chain release factor [Oenococcus oeni
           PSU-1]
 gi|290479123|gb|EFD87785.1| hypothetical protein AWRIB429_1611 [Oenococcus oeni AWRIB429]
          Length = 275

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 70/251 (27%), Positives = 119/251 (47%), Gaps = 6/251 (2%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
             +++ ++++     +  R    L     +    E +  +LG+ +FY    ++      P
Sbjct: 29  LKINNTELLLRFSEQIPARTESKLRLDFDKVQAGEPVQYVLGFANFYGRDFSVGPQVLIP 88

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
             ET  L+D      L  +   D   ILD+GTG+G + + L  E      + VDIS  AL
Sbjct: 89  EVETAELIDHVKNAVL--LPLEDDFSILDIGTGSGNLAITLALELKAKNVLAVDISQDAL 146

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++AK N+     +E    ++SD   +V GLFD+IVSNPPY+++   + +  +V DF+P  
Sbjct: 147 DLAKKNSQNLSATE-VKFIRSDLLENVNGLFDLIVSNPPYVKTGEKE-IDKQVVDFEPHQ 204

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L  G DG+  +R +     +HL  DG    E+ Y Q  ++  + +       +  FKD 
Sbjct: 205 ALYAGADGMDVFRKMIPETVKHLKPDGYAIFEMDYRQGDEIKSLIKKNFPKAQIEIFKDI 264

Query: 254 GGNDRVLLFCR 264
            G DR  +  R
Sbjct: 265 SGLDRF-IAWR 274


>gi|229489932|ref|ZP_04383785.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodococcus erythropolis SK121]
 gi|229323033|gb|EEN88801.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rhodococcus erythropolis SK121]
          Length = 310

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 14/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++ + P  ++D          + + +K   +  I+G     N+ +
Sbjct: 28  DAELLASHLLGVERTRLGLIP--LVDPEVIATFDELVAQRVKRIPLQHIIGVASMGNIDV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL+  AL+F      K  V  +LDL TG+G + L++ +  P     
Sbjct: 86  AVGPGVFIPRPETELLMGWALSFLEGCGSKPPV--VLDLCTGSGVLALSIAEARPDAVVH 143

Query: 126 GVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V+    AL  A+ NA     +        + D    +    +EG  D++VSNPPYI   
Sbjct: 144 AVEKEPAALVWARRNAADREAAGDTPIHLHQGDVTDRNLLPGLEGGVDLVVSNPPYIPEG 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  EV D+DP  +L GG+DGLS  + +   ++R L   G   +E        V  +
Sbjct: 204 --AQLQPEVMDYDPHTALFGGVDGLSVIKPMISNIARWLRIGGAAGIEHDDTNGDGVAAL 261

Query: 239 FESRKLF-LVNAFKDYGGNDRVLLFCR 264
           F +R++F  V    D  G  R ++  R
Sbjct: 262 FSARRVFGEVAQHPDLAGRPRFVVARR 288


>gi|313675595|ref|YP_004053591.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Marivirga tractuosa DSM 4126]
 gi|312942293|gb|ADR21483.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marivirga tractuosa DSM 4126]
          Length = 281

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 108/266 (40%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L     +S   V+V+ +          L + +        I  ILG  +FY
Sbjct: 22  EAESIAFLILEDQFQISRMDVLVEKEIETSKSIDEKLDSILSELKSGIPIQHILGKVEFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  ++ +   PR ETE LV   L       E+     ++D+GTG+G + + + KE   
Sbjct: 82  GRQFLVNPNVLIPRRETEELVHLILENHPDLSEQM----VVDIGTGSGIIPITIAKERKH 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
            +   VDIS  AL  AK NA  N      + +Q+D           ++ VSNPPY+    
Sbjct: 138 CEVYAVDISSSALATAKRNAQLNHA--NINFIQADILEEELELPKSNIWVSNPPYVLEKE 195

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +  +V + +P  +L     D L  Y  I+    +HL   G    EI      +V +I
Sbjct: 196 KAEMQPKVFEHEPSNALFVPDHDALIFYERISMLAFKHLVSGGELYFEINEQFGREVKKI 255

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            E +    V   +D  G +R +   R
Sbjct: 256 MEDKGFQDVKVMRDMQGKNRFVYGRR 281


>gi|199597586|ref|ZP_03211015.1| Methylase of polypeptide chain release factor [Lactobacillus
           rhamnosus HN001]
 gi|199591609|gb|EDY99686.1| Methylase of polypeptide chain release factor [Lactobacillus
           rhamnosus HN001]
          Length = 276

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 9/255 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+     + D         + R    E    I G   F+     
Sbjct: 26  ARYVLMTRADWTPSQLILHRQDPMPDAAWRQFQADVARLANFEPAQYITGQAPFFGTMFA 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWVAE------EQTNAQAGLDMGTGSGAIGLTLARQLPQIDMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S  AL +AK NA           + SD F+ + G FD +V+N PYI       +   
Sbjct: 140 SDVSPSALAVAKQNAAA--QKVNVHFVTSDLFNHLPGRFDFVVTNLPYIAPEETSVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLF 245
              ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F E     
Sbjct: 198 TLRYEPKLALFADHHGLALFERFVTELPQHLNPLGAAYLEFGYHQEPALRQLFAEKLPQA 257

Query: 246 LVNAFKDYGGNDRVL 260
                +D  G+ R++
Sbjct: 258 QATFRRDMAGHPRMV 272


>gi|289670895|ref|ZP_06491970.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 281

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +          ++ R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFEASVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TELLV+ AL     R + R   R  DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTELLVELALE----RFDTRPGRRAADLGTGSGAIALAISSERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA  + +    D     WF  + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMARRNAHKHDLR-NVDFRLGHWFGPLAGEAFDLIASNPPYIAAHDPHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  + ++   
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPGGWLLLEHGWDQGEVVRALLQAVGF 258

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V  F+D    DRV L  
Sbjct: 259 VQVATFQDLEARDRVTLGQ 277


>gi|161507267|ref|YP_001577221.1| protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571]
 gi|160348256|gb|ABX26930.1| Protoporphyrinogen oxidase [Lactobacillus helveticus DPC 4571]
          Length = 280

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L     L+  +  +  D VL D Q       I +  K  S   ILG+  F+  ++
Sbjct: 23  DIDYVLAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV+  L         +   ++LDLGTG+G + +AL KE+      
Sbjct: 83  MVQRGVLIPRFETEELVEWTLKSL------KSGDKVLDLGTGSGCITVALAKEAEKKGIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++   
Sbjct: 137 DLTLYASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLE-KFDKIISNPPYIKTTEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 194 KEMDANVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELFA 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +    F +   KD  G  R++   
Sbjct: 254 KELPDFDIEFRKDMAGKPRMVHGR 277


>gi|259501684|ref|ZP_05744586.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM
           13335]
 gi|259166969|gb|EEW51464.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners DSM
           13335]
          Length = 281

 Score =  234 bits (597), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 22  AEDVDFVLAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 82  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 135

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 136 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 194 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 253

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 254 FAKELPEFTIEFKNDLAGKPRMVHGR 279


>gi|260102571|ref|ZP_05752808.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075]
 gi|260083598|gb|EEW67718.1| protoporphyrinogen oxidase [Lactobacillus helveticus DSM 20075]
 gi|328468716|gb|EGF39698.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus helveticus MTCC 5463]
          Length = 280

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L     L+  +  +  D VL D Q       I +  K  S   ILG+  F+  ++
Sbjct: 23  DIDYVLAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFFGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV+  L         +   ++LDLGTG+G + +AL KE+      
Sbjct: 83  MVQRGVLIPRFETEELVEWTLKSL------KSGDKVLDLGTGSGCITVALAKEAEKKGIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++   
Sbjct: 137 DLTLYASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLE-KFDKIISNPPYIKTTEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 194 KEMDENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELFA 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +    F +   KD  G  R++   
Sbjct: 254 KELPDFDIEFRKDMAGKPRMVHGR 277


>gi|91070123|gb|ABE11047.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone ASNC729]
          Length = 289

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 11/263 (4%)

Query: 9   SFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAI--VRSLKHESIHRILGWRDFYNV 63
             L  V G+S   +    ++P   L  ++       +     L+   I  + G   + ++
Sbjct: 28  VLLDCVGGISRSDINFIAINPKGNLHLKKNLVFLEHVWDDHLLRSCPIQYLCGISFWRDL 87

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L +++    PRPETEL+VD  L     + EK   +   +LGTG+GA+ +AL    P   
Sbjct: 88  KLKVTNKVLIPRPETELIVDIVLNIFRRKSEK---LFFAELGTGSGAISIALALAYPSSN 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
           GV  DI   ALEIA  N + +           +W+S +E   G  D+ +SNPPYI     
Sbjct: 145 GVATDIDQDALEIATKNFINSSKQSNLKFYCGNWWSPLENFKGKIDLAISNPPYIPKDTY 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EV++F+P+++L GG DGL H R I       L + G   +E  ++Q   V +I  
Sbjct: 205 EKLPKEVKNFEPKVALLGGDDGLEHIREIIQKAPLFLKEKGWLILENHFDQGEKVKKILI 264

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
             K   +   KD  G  R  +  
Sbjct: 265 KNKFTSIEIVKDLTGIGRFTIGR 287


>gi|302191108|ref|ZP_07267362.1| protoporphyrinogen oxidase [Lactobacillus iners AB-1]
          Length = 279

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|320008548|gb|ADW03398.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces flavogriseus ATCC 33331]
          Length = 281

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+    +   PD+  D R        I R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGALHNVPDADFDAR----YWETIARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL TG+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL   + NA       R    + D  S++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALRWTRKNAE----GSRVTVHRGDALSALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNKRPRFATARK 278


>gi|315653747|ref|ZP_07906667.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC
           55195]
 gi|315489109|gb|EFU78751.1| protein-(glutamine-N5) methyltransferase [Lactobacillus iners ATCC
           55195]
          Length = 281

 Score =  233 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 22  AEDVDFVLAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 82  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 135

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 136 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 194 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 253

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 254 FAKELPEFTIEFKNDLAGKPRMVHGR 279


>gi|291454160|ref|ZP_06593550.1| methylase [Streptomyces albus J1074]
 gi|291357109|gb|EFE84011.1| methylase [Streptomyces albus J1074]
          Length = 285

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 105/266 (39%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V  +    +    DS  D R       AI R    E +  I G   F  
Sbjct: 27  PRNDAEELAAYVHQVKRGALHTVKDSDFDAR----YWEAIARREAREPLQHITGLAYFRY 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  ++DL +G+GA+ LAL +E P  
Sbjct: 83  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--VVDLCSGSGAIALALAQEVPRS 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVI 179
               V++S  AL   + N        R    Q D F     ++G  D+++SNPPYI    
Sbjct: 141 TVHAVELSEDALVWTRKNVE----GSRVHLHQGDAFGALPELDGQVDLVISNPPYIPLTE 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP+++L  G DGL   R I     R L   G+  VE    Q   V  IF
Sbjct: 197 WEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGIVVVEHADTQGGQVPWIF 256

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E +         D     R     +
Sbjct: 257 TEEKGWADAADHPDLNNRPRFATARK 282


>gi|242241524|ref|ZP_04795969.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
 gi|242235067|gb|EES37378.1| HemK family methyltransferase [Staphylococcus epidermidis W23144]
          Length = 278

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  
Sbjct: 25  AEWLFLDVFGWSKTDYLIHKDEQMSLTSINKLDKALDRMVTGEPIQYIVGFQSFYGYQFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+GA+ + L    P    + 
Sbjct: 85  VNQHCLIPRPETEEVMLHFLEL------CKKTDTIADIGTGSGAIAITLKLLQPELNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL +AK NA      +    L+ +    +   +   D ++SNPPYI    +  +
Sbjct: 139 TDLYEDALSVAKQNASHYH--QNIQFLRGNALKPLIEKDIKLDGLISNPPYIGHSEIIDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V +++P  +L    +G + Y +I + +   + + G    EIGY Q   + R+ +   
Sbjct: 197 ESTVLNYEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYQQGDILKRMIQDLY 256

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  FKD  GN R++
Sbjct: 257 PEKEVEIFKDINGNQRII 274


>gi|212640539|ref|YP_002317059.1| methylase of polypeptide chain release factor [Anoxybacillus
           flavithermus WK1]
 gi|212562019|gb|ACJ35074.1| Methylase of polypeptide chain release factor [Anoxybacillus
           flavithermus WK1]
          Length = 283

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRL 65
           +   L     ++  Q+       +D+         + +  L+H  I  I+G   FY    
Sbjct: 26  AEWLLRHHLQMTRAQLFASLRDPMDEASEQTFMADVKKHALQHVPIQYIIGHEQFYGRTF 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++     PRPETE LV   LA +  +      + ++D+GTG+GA+ + L  E P +   
Sbjct: 86  IVNEHVLIPRPETEELVSHVLARTTEK-----ALSVVDVGTGSGAIAITLSLERPTWHVY 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDC 182
           G+DI+  +LE+AK NA  N +       + D    +       DV+VSNPPYI +  +  
Sbjct: 141 GIDIAVSSLEVAKRNA--NQLGACVHWFEGDLLQPIIDRGIQVDVVVSNPPYIPASDIPT 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   V+  +P  +L GG DGL  YR + + +   +    L + EIG+ Q   V  + +  
Sbjct: 199 LSPVVQK-EPLRALVGGEDGLLFYRRLMEQLPHVVTSQALIAFEIGHGQGQAVQTMLQQT 257

Query: 243 -KLFLVNAFKDYGGNDRVLLF 262
                V+   D    +R+++ 
Sbjct: 258 FPSAHVDVLFDINSKERIVIA 278


>gi|325922322|ref|ZP_08184099.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
 gi|325547177|gb|EGD18254.1| (protein release factor)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
          Length = 286

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 7/259 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G     +       + D         + R    E +  + G R F+ + L
Sbjct: 28  DAEPLLLHALGRDRAWLFAHGRDPVADAVAQAFEALVQRRQAGEPVAYLTGTRGFWTLDL 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S+ T  PR +TE LV+ AL     R +        DLGTG+GA+ LA+  E P  + +
Sbjct: 88  AVSTATLIPRADTEALVELALE----RFDNMQGRCAADLGTGSGAIALAIASERPHAQVI 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA  + +    +     WF+ + G  FD+I SNPPYI +       
Sbjct: 144 ATDASAAALAVAQQNASRHQLR-NVECRLGYWFAPLAGERFDLIASNPPYIAAHDPHLRE 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R  +P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +R  
Sbjct: 203 GDLR-HEPASALASGPDGLDDIRLIVADAPMHLLPGGWLLLEHGWDQGTAVADLLRARGF 261

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             V   +D    DRV L  
Sbjct: 262 EAVATHQDLEQRDRVTLGR 280


>gi|315186592|gb|EFU20351.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Spirochaeta thermophila DSM 6578]
          Length = 282

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 108/261 (41%), Gaps = 6/261 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L   +GL    ++      +    R    + + R L  E +  I G ++FY + 
Sbjct: 25  LDALLILSHASGLPKEALLASYPEPVPPETRRTFESLLARRLAGEPVSYIRGLKEFYGLT 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FK 123
             +      PRP+TE+LVD+AL           +  I D  TGTG + +A+L  +P    
Sbjct: 85  FHVDRRVLVPRPDTEVLVDAALTLIR---RDPAITHIHDACTGTGCILIAILTHTPRPLT 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+S +AL++ + NA     +      +SD  SSV G F +I +NPPY+    V  +
Sbjct: 142 ASASDVSEEALDVFRENASRLLGTVPPH-HRSDLLSSVPGRFHLITANPPYLTEEEVAVM 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                  +P ++L  G DGLSH R +      HL   G    E    Q   V  ++    
Sbjct: 201 KAS-GWPEPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADAVAELYREAG 259

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V    D  G  R  L  R
Sbjct: 260 YTHVRHLPDLAGRRRATLARR 280


>gi|325281900|ref|YP_004254442.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Odoribacter splanchnicus DSM 20712]
 gi|324313709|gb|ADY34262.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Odoribacter splanchnicus DSM 20712]
          Length = 290

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 112/257 (43%), Gaps = 12/257 (4%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                 V   ++  + +  + +LD+         +        I  ILG   F  +R   
Sbjct: 29  RIVYMDVLHYTNIDIHLRKNEILDESFINKFIGIVRLLKSGSPIQYILGETGFAGLRFKS 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PRPETE LV     +  P        R+LD+G+G+G + ++L +        GV
Sbjct: 89  TPSALIPRPETEELVRWVGEWLKP------GNRLLDVGSGSGCIGISLARLCQGAHVTGV 142

Query: 128 DISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           DIS +A+E+A+ NA+ NGV   F   D L     ++    +D+IVSNPPYI       + 
Sbjct: 143 DISPEAIELARENAILNGVKAEFLLRDILHPQ--TASWDTYDLIVSNPPYIRESEKGTME 200

Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            +V D +P  +L     D L  YR IA+    HL+  GL   EI      + + +     
Sbjct: 201 AKVLDHEPHQALFVPDEDPLLFYRAIAEFGLTHLHPQGLLFFEINEAFGQETIALLTRYG 260

Query: 244 LFLVNAFKDYGGNDRVL 260
              +   KD+ G +R++
Sbjct: 261 YRNIELRKDFYGKERMV 277


>gi|282897449|ref|ZP_06305451.1| Modification methylase HemK [Raphidiopsis brookii D9]
 gi|281198101|gb|EFA72995.1| Modification methylase HemK [Raphidiopsis brookii D9]
          Length = 298

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 16/269 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVD-------PDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           R+    L  + G+    + ++          VL   +   L     R  +   I  + G 
Sbjct: 31  REVDWLLQELAGMDKLTLRLESFKDYQEMTMVLSLAELDSLWQ--KRLQQRVPIQYLAGR 88

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             + N  L +S     PRPETE+L+D  +  +   ++       +DLGTG+GA+ L L++
Sbjct: 89  TPWRNFTLAVSDAVLIPRPETEILIDLVIESANQDLQSG---IWVDLGTGSGAIALGLVE 145

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
                K  G DIS +AL +A++NA   G ++R +  Q  W+  +   +G    +VSNPPY
Sbjct: 146 VLTNAKIYGTDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLKGKISGMVSNPPY 205

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I S ++  L  EV   +P ++LDGG+DGL   R + +    +L   G+  +E+   Q   
Sbjct: 206 IPSDLIGTLEPEVVKHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQDEM 265

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLF 262
           V  +  +      ++   D  G +R  L 
Sbjct: 266 VREMLINNGNYSHISIHTDLAGINRFALA 294


>gi|223043926|ref|ZP_03613967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus capitis SK14]
 gi|222442641|gb|EEE48745.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus capitis SK14]
          Length = 278

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +   S    ++  +  +          A+ R L  E I  I+G++ FY     
Sbjct: 25  AEWLLLDLFKWSRTDYLIHREEQMSQADLAKFDLALHRMLSGEPIQYIVGFQSFYGYTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + ++   PRPETE ++   L       +      + D+GTG+GA+ + L    P    + 
Sbjct: 85  VDNNCLIPRPETEEVMLHFLN------QCHHQDTVADIGTGSGAIAITLKLLKPDLNVLA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+    L +A++NA  +   +    LQ D    +   +   D ++SNPPYI+      +
Sbjct: 139 TDLYEDTLNVARNNATLH--QQEIQFLQGDALKPLIDNDIKVDGLISNPPYIDEGEARDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V  ++P  +L    +G + Y  I   + + + + G    EIGYNQ   +  +  S  
Sbjct: 197 DDTVLKYEPHHALFAENEGYAIYEGILKDLPQVMKEQGHVVFEIGYNQGNQLKALINSMY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
              LV   +D  GN+R++ F
Sbjct: 257 PDKLVKVIRDINGNERIVSF 276


>gi|296436464|gb|ADH18634.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydia trachomatis G/11222]
          Length = 290

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 112/260 (43%), Gaps = 8/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L  +  +SS   +    + L   ++      + +         I G   F  
Sbjct: 20  PQREAEDILMDLLEISSRSAL--HQAKLSSEEQSLYWKRLRKRGDRCPTAYIHGKVHFLG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L ++     PR ETE+ V+  + +     EK       D+  G+G + LA+ K  P  
Sbjct: 78  VELQVTPQVLIPRQETEIFVEQIIGYLQMHKEK---TTFYDVCCGSGCIGLAVRKHCPHV 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DIS +AL IA+SNA +N ++   D L  D F       DV+V NPPY+       
Sbjct: 135 RVTLSDISPEALAIAESNARSNALA--VDFLLGDLFDPFSFPADVLVCNPPYLSYKEFFE 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EVR  +P  +L GG+ GL  Y  IA  + + L   G+  +EIG  Q  DV +IF ++
Sbjct: 193 SDPEVRCHEPWKALVGGVSGLEFYHRIATHIHKILVSGGVGWLEIGSTQGEDVKQIFHAK 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      KD    DR    
Sbjct: 253 GIRG-RVLKDCAQLDRFFFL 271


>gi|239982316|ref|ZP_04704840.1| putative methyltransferase [Streptomyces albus J1074]
          Length = 281

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 105/266 (39%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V  +    +    DS  D R       AI R    E +  I G   F  
Sbjct: 23  PRNDAEELAAYVHQVKRGALHTVKDSDFDAR----YWEAIARREAREPLQHITGLAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  A+           +  ++DL +G+GA+ LAL +E P  
Sbjct: 79  LELQVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--VVDLCSGSGAIALALAQEVPRS 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVI 179
               V++S  AL   + N        R    Q D F     ++G  D+++SNPPYI    
Sbjct: 137 TVHAVELSEDALVWTRKNVE----GSRVHLHQGDAFGALPELDGQVDLVISNPPYIPLTE 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + +  E RD DP+++L  G DGL   R I     R L   G+  VE    Q   V  IF
Sbjct: 193 WEYVAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGIVVVEHADTQGGQVPWIF 252

Query: 240 -ESRKLFLVNAFKDYGGNDRVLLFCR 264
            E +         D     R     +
Sbjct: 253 TEEKGWADAADHPDLNNRPRFATARK 278


>gi|282882112|ref|ZP_06290753.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus lacrimalis 315-B]
 gi|281298142|gb|EFA90597.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus lacrimalis 315-B]
          Length = 276

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             L +S   L R+       +    D  L+ +        +      + +  IL    F 
Sbjct: 21  DPLYESRLILSRILEKDISFIYAYLDLELEPKDEEKFFQILKMRQSGQPLQYILKETYFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + +  ++     PR ETE+ V+         ++K      L++G G+G V + +      
Sbjct: 81  DKKFKINRGVLIPRKETEISVEVITEV----VKKNKCKSFLEIGCGSGIVTIMV-NLLTN 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                +DIS  A+E  K+N    G   +    +S+ F +V G FD+I SNPPYI++  + 
Sbjct: 136 INCSCLDISDLAIENTKTNIKNLGA--KVQVFKSNLFENVTGKFDIIYSNPPYIKTGEIK 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++F+P  +LDGG  GL  Y+ I    + +LN +G    EIGY+QK  +  +   
Sbjct: 194 NLQDEVKNFEPISALDGGESGLEFYKKIIKQSTNYLNDNGFLIFEIGYDQKDSIENLMSK 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F +   KD  G  RV +  R
Sbjct: 254 D--FNIYFIKDLQGYYRVAVGKR 274


>gi|90420192|ref|ZP_01228100.1| putative hemK modification methylase involved in heme biosynthesis
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90335526|gb|EAS49276.1| putative hemK modification methylase involved in heme biosynthesis
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 298

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 134/259 (51%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  +      +V     +V+           + R    E +HRI+G R FY   
Sbjct: 31  LDARLLLAEICDRRPGEVHSASGAVVSAADAARFDAVLARRAAGEPVHRIIGRRAFYEHD 90

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             LS +T EPRP+TE+LV+ A       + ++      D+GTGTGA+ ++LL      + 
Sbjct: 91  FVLSPETLEPRPDTEVLVEEAREAMAAIVARKGRCVFADVGTGTGAIAVSLLALFAEAEA 150

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V +DIS  AL  A+ NA+  GV++R   +++++  ++ G  +++VSNPPYI    +  L 
Sbjct: 151 VALDISDGALRTARRNAIVAGVADRMLAVRANYLDAIGGPLELVVSNPPYIPHDDIAALS 210

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVRD DP ++LDGG DGL  YR +A G  R +   GL  VEIG  Q+ DV  IF +   
Sbjct: 211 REVRDHDPLLALDGGADGLDAYRALATGARRVVRPQGLVIVEIGVGQERDVAAIFAAEGF 270

Query: 245 FLVNAFKDYGGNDRVLLFC 263
            L    +D GG  RVL   
Sbjct: 271 ILDAETRDLGGVIRVLTLR 289


>gi|309803195|ref|ZP_07697292.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 11V1-d]
 gi|309805667|ref|ZP_07699708.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 09V1-c]
 gi|309806343|ref|ZP_07700356.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 03V1-b]
 gi|309809925|ref|ZP_07703773.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 2503V10-D]
 gi|308164703|gb|EFO66953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 11V1-d]
 gi|308165027|gb|EFO67269.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 09V1-c]
 gi|308167327|gb|EFO69493.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LactinV 03V1-b]
 gi|308169713|gb|EFO71758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 2503V10-D]
          Length = 279

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNK+G   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKNGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|194468251|ref|ZP_03074237.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus reuteri 100-23]
 gi|194453104|gb|EDX42002.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus reuteri 100-23]
          Length = 288

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 8/257 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L +  G  +  +++     +   +  +  +AI R L HE    I+G   FY     +
Sbjct: 31  QFLLQQSHGWDATHLLLHNRDEMPADEVDWWKDAITRLLNHEPAQYIVGQAPFYGRTFKV 90

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   P  ET  L+D  L            +++LDLGTG+G + + L  E P +     
Sbjct: 91  NKNVLIPEAETAELIDWVLQEMPSC-----PLKVLDLGTGSGVIGITLALERPNWHVSLS 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL +A+ N     +      ++SD F +++  +D+IV+NPPYI+      +   +
Sbjct: 146 DISPAALAVAQENMAKFNLE--LPLIKSDLFENIDQQYDLIVTNPPYIDPDDTGEIDQAI 203

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFL 246
            + +P ++L     GL  Y  +     ++L   G    E GY+Q+  +  +     +   
Sbjct: 204 LENEPALALFANERGLGFYHRLFKQAGQYLTTTGQIFGETGYDQEESIQELLHQTDEHAQ 263

Query: 247 VNAFKDYGGNDRVLLFC 263
           +    D  G  R++   
Sbjct: 264 ICPRHDVAGKMRMIHAW 280


>gi|300814561|ref|ZP_07094815.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511329|gb|EFK38575.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 276

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             L +S   L  +       +    D  LD +        +      + +  IL    F 
Sbjct: 21  DPLYESRLILSLILEKDISFIYAYLDLELDPKDEEKFFRILKMRQSGQPLQYILEETYFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  ++     PR ETE+ V+         I+K      L++G G+G V + +      
Sbjct: 81  GKKFKINRGVLIPRKETEISVEVITDI----IKKNKCKSFLEIGCGSGIVTIMV-NLLTN 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                +DIS  A+E  K+N    G   +    +S+ F +VEG FD+I SNPPYI++  + 
Sbjct: 136 INCSCLDISDLAIENTKTNIKNLGA--KVQVFKSNLFENVEGKFDIIYSNPPYIKTGEIK 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV++F+P  +LDGG  GL  Y+ I    + +LN +G    EIGY+QK  +  +   
Sbjct: 194 NLQDEVKNFEPISALDGGESGLEFYKKIIKQSTNYLNDNGFLIFEIGYDQKDSIENLMSK 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F +   KD  G  RV +  R
Sbjct: 254 D--FNIYFKKDLQGYYRVAVGKR 274


>gi|297626233|ref|YP_003687996.1| methylase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296921998|emb|CBL56560.1| Methylase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 292

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 71/240 (29%), Positives = 104/240 (43%), Gaps = 4/240 (1%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             +DD       + I R    E +  + G   F  + + +    F PRPETE +V  AL 
Sbjct: 48  REVDDAVADRYADLIRRRAAGEPVQYLTGRAWFRKIDVQVGPGVFIPRPETEAVVHFALD 107

Query: 88  FSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNG 145
             L  R +      I+DLGTG+G +  ++L E P   +   V+ S +ALE A+ N     
Sbjct: 108 QLLNLRADTGPSPVIVDLGTGSGVIAKSILSEYPGTPRMYAVERSPQALEWARRNLADTP 167

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            +     + +D    +EG  D+++SNPPY+ +   D L  +V D+DP  +L GG DGL  
Sbjct: 168 ATVVAGDM-ADALPQLEGKVDLVISNPPYLPAAHADELPADVLDYDPHEALFGGDDGLET 226

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            R I    +R L   G   VE    Q      I  +      V    D  G  R +   R
Sbjct: 227 IRGIVPVATRLLRPGGWLIVEHDDTQGHSAAGIISAAGRFEHVEDHPDLTGRPRFVTAIR 286


>gi|296282002|ref|ZP_06860000.1| HemK family modification methylase [Citromicrobium bathyomarinum
           JL354]
          Length = 292

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 13/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G S   +++       D           R L HE +  I G  +FY 
Sbjct: 27  ARIDAELLMAHALGCSRSAMLLHHMR---DPVPDGFAPLFARRLGHEPVAYITGSAEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L ++     PR ++E L+D+A              RILDLGTG+GA+ LA L + P  
Sbjct: 84  FELKVTPAVLIPRGDSETLIDAAQEHF---GTGEPPQRILDLGTGSGALLLAALYQWPEA 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           +G+G+D S  AL +A+ NA   G++ER   L+  W         G FD+++ NPPY+   
Sbjct: 141 EGIGLDASMPALRVAQCNARKLGLAERARFLRRSWRRDGWQRDLGTFDLVLCNPPYV--E 198

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L   VR+ +P  +L  G +GL  YR +   ++  L  DG+   EIG  Q   V  +
Sbjct: 199 DDASLDPCVREHEPGSALFAGPEGLDDYRILLPQIAPLLTPDGIAIFEIGGTQHEAVAAL 258

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
            +++ L      +D  G+ R ++ 
Sbjct: 259 AQNQGLENA-MRRDLNGHPRAMIM 281


>gi|332827555|gb|EGK00301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dysgonomonas gadei ATCC BAA-286]
          Length = 279

 Score =  233 bits (595), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 7/254 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +  +T +   QV +DP  V        +   + R  ++E I  I+G  +F+ +  ++
Sbjct: 26  RIIIEYITKMPYPQVFIDP-PVSTPELHNRIDVILKRLKQYEPIQYIIGETEFFGLPFSV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + +   PRPETE LV+  L  +     K+  + +LD+GTG+GA+ +AL K          
Sbjct: 85  NENVLIPRPETEELVELILKEN-----KKSELSLLDIGTGSGAIAVALAKNMARTSVSAW 139

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS KAL++A  N+  N     F  +        +  +D+IVSNPPY+     + +   V
Sbjct: 140 DISYKALDVAALNSKANSTDISFGRVDVLGDYPTDKKYDIIVSNPPYVLESEKEQMERNV 199

Query: 188 RDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            +++P  +L     + L  Y+ IAD     L   G    EI   +  + V++ E +    
Sbjct: 200 LEYEPHTALFVTDNNALLFYKRIADIALNLLTPAGRLYFEINQAKGAETVKMLEEKGFTE 259

Query: 247 VNAFKDYGGNDRVL 260
           V  F+D    DR++
Sbjct: 260 VALFQDLSKKDRMI 273


>gi|238026091|ref|YP_002910322.1| HemK protein [Burkholderia glumae BGR1]
 gi|237875285|gb|ACR27618.1| HemK protein [Burkholderia glumae BGR1]
          Length = 282

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 119/265 (44%), Gaps = 11/265 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G S  Q+I   D+ L+            R    E + +++G R+F+ +  
Sbjct: 21  DARILLAHVLGWSRTQLITRADAPLEAAAAERFRALEARRSAGEPVAQLVGSREFFGLAF 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PRPETELLV++AL      ++      +LDLGTG+GAV LA+    P  +  
Sbjct: 81  EVTPDVLIPRPETELLVEAALD----ALDGIAAPAVLDLGTGSGAVALAIAAARPDARVT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +D S  AL +A+ NA       R       L SDW++++     F  IVSNPPYI    
Sbjct: 137 ALDRSAAALAVARRNAARLLDDARPGGAVSLLASDWYAALGPAARFHAIVSNPPYIARHD 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L    DGL+  R I  G    L   G   +E GY+Q   V  + 
Sbjct: 197 PHLDQGDLR-FEPRGALTDEADGLAAIRRIVAGAGAFLLPRGELWIEHGYDQAEAVRALL 255

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  V +  D    +R     R
Sbjct: 256 LQAGFREVASLADLASIERTTGGRR 280


>gi|291542172|emb|CBL15282.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus bromii L2-63]
          Length = 280

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 118/262 (45%), Gaps = 12/262 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++ S L +   L     I+      D+         I + +  E +  ILG   F     
Sbjct: 25  EAQSLLQKAFSLDRVGFIMHKTDKADENCSHNFLKFIEKRISGEPLQYILGEWSFMGFDF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +TE++V+  + F    +E R   + +DL +G+GA+ +AL K S   +  
Sbjct: 85  KVGRGVLIPRDDTEVVVNLCIDF----LENRTDKKTVDLCSGSGAIAVALDKIS-GAEVT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVD 181
            V+I   A    ++N   N  S     + +D     E    G FD+IVSNPPYI+S  ++
Sbjct: 140 AVEIDETAFSYLETNVKENNSS--VKPVMADALEICETFADGEFDLIVSNPPYIKSADIE 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  +PR++LDGG DG   YR I    SR L K G  + E+G NQ   V  +   
Sbjct: 198 TLQKEVRL-EPRLALDGGEDGCDFYREIVSRWSRKLKKGGALAFELGENQADAVKALMTD 256

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           +         D+GG  R ++  
Sbjct: 257 KGFSDFKISLDFGGVQRAIIGT 278


>gi|312874596|ref|ZP_07734620.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2053A-b]
 gi|311089826|gb|EFQ48246.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2053A-b]
          Length = 279

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYHLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADALIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|227892679|ref|ZP_04010484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus ultunensis DSM 16047]
 gi|227865550|gb|EEJ72971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus ultunensis DSM 16047]
          Length = 280

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 20/273 (7%)

Query: 2   QALRDSH-----SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +A  D         L     L+  +  +  D VL D Q       I +  K  S   ILG
Sbjct: 14  EAAEDIRPEDVDYVLAERLNLTPSEFEMKQDMVLSDEQVKQANKDIKKLAKGVSPQYILG 73

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +  F   ++ +      PR ETE LV+ AL         +   ++LDLGTG+G + +AL 
Sbjct: 74  YAWFLGYKIMVQRGVLIPRFETEELVEWALQSL------KSGNKVLDLGTGSGCITVALA 127

Query: 117 KES-----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           KE+             D++  AL  ++ N +   +     T +++    +E  FD+I+SN
Sbjct: 128 KEAEKKGIKALTLYASDVTDTALRTSEENFLNYHLD--VTTRKANVLIGLE-KFDLIISN 184

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI++   + +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G+++
Sbjct: 185 PPYIKTTEKNVMDKNVLQNEPKEALFAGKDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSE 244

Query: 232 KVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFC 263
           +  +  +F +    F +   KD  G  R++   
Sbjct: 245 EEQLKELFAKELPDFDIEFRKDMAGKPRMIHGR 277


>gi|70725919|ref|YP_252833.1| hypothetical protein SH0918 [Staphylococcus haemolyticus JCSC1435]
 gi|68446643|dbj|BAE04227.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 277

 Score =  233 bits (594), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  + G S    ++     +   +    + A  R L  E I  I+G++ FY  +  
Sbjct: 24  AEWLMLDLFGWSRTDYLIHMYDDMSKAEEIKFSLATERMLLGEPIQYIVGFQSFYGYQFQ 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+G + + L K +  F    
Sbjct: 84  VNEHCLIPRPETEEVMLHFLE------NCKSSATIADIGTGSGVLAITLKKLNKDFTVYA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DI  + LE+A  NA  + V+     L+ +            D IVSNPPYI+   ++ +
Sbjct: 138 TDIVQETLEVASDNAHYHEVA--VTFLKGNALKPFIQNNIKLDGIVSNPPYIDVDEMEMM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  ++P  +L     G + Y  I + + + LNKD   + EIGYNQ   +   I E  
Sbjct: 196 ENTVVKYEPHKALFAENKGFAIYELILNDLPKVLNKDAYVTFEIGYNQGERLKNIILEKY 255

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KD  GN+R++ F
Sbjct: 256 PKLDVKVIKDINGNERIVSF 275


>gi|118594304|ref|ZP_01551651.1| modification methylase, HemK family protein [Methylophilales
           bacterium HTCC2181]
 gi|118440082|gb|EAV46709.1| modification methylase, HemK family protein [Methylophilales
           bacterium HTCC2181]
          Length = 283

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 7/260 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A  ++   L  V   +S Q+I+  +  + +     + + + + L    +  +    DFY
Sbjct: 25  EAELEAQFILQFVLKETSTQLIIGRNKKISENDAGLIESIVKQRLLGTPLAYLFKEWDFY 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++  T  PR +TEL++D      +   ++   ++ILDLGTG+G + L L      
Sbjct: 85  GRTYYINQQTLIPRQDTELMID----ILIQNNKEDSSLKILDLGTGSGVIGLTLAHHFFN 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            +    DIS +A+++AK N   +G+      ++S+WF  +  G FDVIVSNPPYI     
Sbjct: 141 AQITLSDISSEAIKVAKINGGNSGLK-NIQFVESNWFEKIPPGKFDVIVSNPPYIPKNDK 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                E+ +  P+I+L   + GL     I     ++LNK GL  +E G++Q   V  IF 
Sbjct: 200 HLKHPELLE-QPQIALMSELGGLQAITDIVKNAKQYLNKAGLLMIEHGFDQAPTVKNIFT 258

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     V  ++D     R+ 
Sbjct: 259 ANTFNNVRQYQDINSRIRIT 278


>gi|158426117|ref|YP_001527409.1| modification methylase [Azorhizobium caulinodans ORS 571]
 gi|158333006|dbj|BAF90491.1| modification methylase [Azorhizobium caulinodans ORS 571]
          Length = 287

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 136/261 (52%), Gaps = 4/261 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   +    GL    V +     L       +     + L    + R++G ++F+++ 
Sbjct: 29  LDASLLIAHALGLEPGDVRLRGADPLAPDALPRIEALAAQRLSGVPVARLVGEKEFWSLS 88

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +LS +T  PRP+TE +V++AL     R      + ILDLGTG+GA+  ALL E P   G
Sbjct: 89  FSLSPETLVPRPDTETVVEAALMTVTDRTA---PLHILDLGTGSGAILAALLVELPAAVG 145

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVD S  A   A+ N    G+  R   +  DW S++ G FD++VSNPPYI S+ +  L 
Sbjct: 146 IGVDQSEGAARTARDNLARAGLQGRGTVIVGDWASALGGGFDLVVSNPPYIPSIDIVGLA 205

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +EVR+ DP  +LDGG DGLS YR IA    R L   G   +E+G  Q+ +V  +  +  L
Sbjct: 206 IEVRENDPLAALDGGADGLSSYRIIAAEAPRLLKAGGHLVLELGIGQEAEVAALAGAAGL 265

Query: 245 FLVN-AFKDYGGNDRVLLFCR 264
            +   A +D GG  R L+  R
Sbjct: 266 AITGPARRDLGGIPRALVARR 286


>gi|314934186|ref|ZP_07841547.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus caprae C87]
 gi|313653091|gb|EFS16852.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus caprae C87]
          Length = 278

 Score =  233 bits (594), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 110/260 (42%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  +   S    ++  +  +          A+ R L  E I  I+G++ FY     
Sbjct: 25  AEWLLLDLFKWSRTDYLIHREEQMSQADLAKFDLALHRMLSGEPIQYIVGFQSFYGYTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + ++   PRPETE ++   L       +      + D+GTG+GA+ + L    P    + 
Sbjct: 85  VDNNCLIPRPETEEVMLHFLN------QCHHQDTVADIGTGSGAIAITLKLLKPDLNVLA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+    L +A++NA  +   +    LQ D    +       D ++SNPPYI+      +
Sbjct: 139 TDLYEDTLNVARNNATLH--QQEIQFLQGDALKPLIDNNIKVDGLISNPPYIDECEARDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V  ++P  +L    +G + Y  I   + + + + G    EIGYNQ   +  +  S  
Sbjct: 197 DDTVLKYEPHHALFAENEGYAIYEGILKDLPQVMKEQGHVVFEIGYNQGNQLKALINSMY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
              LV   +D  GN+R++ F
Sbjct: 257 PDKLVKVIRDINGNERIVSF 276


>gi|297192052|ref|ZP_06909450.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197719498|gb|EDY63406.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 281

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHNVKDADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL +G+GA+ LA+ +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIEAVRAMDVVEPL--IVDLCSGSGAIALAMAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++S  AL+  + NA       R      D  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELSEDALKWTRKNAE----GSRVTVHHGDALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R I     R L   GL  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQMALFSGEDGLDTIRGIERTAHRLLRPGGLVVIEHADTQGGQVPWIFNEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                     D     R     +
Sbjct: 256 SGWADAADHPDLNKRPRFATARK 278


>gi|325913020|ref|ZP_08175393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 60-B]
 gi|325477700|gb|EGC80839.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 60-B]
          Length = 279

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLSKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|299142047|ref|ZP_07035181.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella oris C735]
 gi|298576509|gb|EFI48381.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella oris C735]
          Length = 288

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 7/269 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A     + L     L+   +  D    L D ++  +   I R    E +  ++G   F 
Sbjct: 18  EAKAVVRTLLEERFNLTLTDLYTDGLDRLTDEEKVRMETLIERLEAGEPVQYVVGKARFC 77

Query: 62  NVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L   V SA       ++    +R+LD+GTG+G + + L  +
Sbjct: 78  GRDYMVAPGVLIPRPETEMLCKEVISAYNRPYCTLQPPAPLRVLDIGTGSGCIAVTLALD 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT---LQSDWFSSVEGLFDVIVSNPPYI 175
                    DIS  AL IA+ NA         +    L  D  +     FD+IVSNPPYI
Sbjct: 138 LWNCTVTAWDISGDALMIARENAHRLQAHVNLELQDALNPDETALNASPFDIIVSNPPYI 197

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                  +   +   +P  +L     D L  YR+IA     HL   G+ + EI      +
Sbjct: 198 CIRESKDMAKHILAHEPHTALFVPDDDPLLFYRSIAHYGLSHLKPSGMLAFEINPIYAEE 257

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++ E      +   +D  G +R+++  
Sbjct: 258 TCKMLEHMGYEQIERKEDQYGKERIVIAR 286


>gi|257453785|ref|ZP_05619063.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enhydrobacter aerosaccus SK60]
 gi|257448712|gb|EEV23677.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enhydrobacter aerosaccus SK60]
          Length = 284

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 13/260 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L     +    +I     ++          A+   +  +    ++G + F+     ++ 
Sbjct: 28  LLGEYLHVGQTYLITHDSEMVTAAIVTQYFAALEELIAGKPFAYVVGKQSFWQHEFLVNQ 87

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            T  PRP+TE L+++ L      + K+  + ILDLGTG+G + + L +E        VD 
Sbjct: 88  HTLIPRPDTERLIEAVLNHHKNSLSKQ--MNILDLGTGSGCIAITLAEEFKNSSVSAVDK 145

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDC 182
           S +AL +A  NA   GVS      +  W+             FD+IVSNPPYI+      
Sbjct: 146 SPQALSVATQNAKRIGVS-NIAFFEGSWYEPFMTAHGDESNKFDIIVSNPPYIDPNDPHL 204

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            G      +P  +L     G++    I     + L   GL ++E G+ Q   V  +F S 
Sbjct: 205 AG---LTDEPISALIADNKGMADICHIVKTAPQFLQPHGLLAIEHGHEQGEQVRDVFLSN 261

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KDYG N+RV L 
Sbjct: 262 GFDEVITVKDYGNNERVTLG 281


>gi|228473463|ref|ZP_04058216.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga gingivalis ATCC 33624]
 gi|228275070|gb|EEK13873.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Capnocytophaga gingivalis ATCC 33624]
          Length = 281

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 10/259 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +    G++  + I+  D  +   ++  L        K+  I  I     F  + L + 
Sbjct: 28  IIIEETLGMNQVEAILYHDQEIAQEKKMELQRVCQELSKNIPIQYIYQKAHFLGLSLYVD 87

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           S    PR ETE LVD  +   +        +RILD+GTG+GA+ +AL K  P      +D
Sbjct: 88  SRVLIPRQETEELVDWIVTSYMAA----PQLRILDIGTGSGAIAIALKKHLPQASLTAID 143

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           IS  AL +A+ NA  +GV+     LQ D      +   +D+IVSNPPY+  +    +   
Sbjct: 144 ISEGALAVAQQNAKRHGVA--ITFLQQDILGVEDLGTSYDIIVSNPPYVRELEKKEMHAN 201

Query: 187 VRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           V D++P ++L    D  L  Y  IA+  +R+L ++G    EI        + +   +   
Sbjct: 202 VLDYEPSLALFVPDDNPLLFYEKIAEIAARNLTEEGTLYFEINQYLGQQTLEMLHKKGFK 261

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            +   KD   NDR++   R
Sbjct: 262 AL-LRKDLNDNDRMIRAGR 279


>gi|329921114|ref|ZP_08277637.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 1401G]
 gi|328935021|gb|EGG31510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners SPIN 1401G]
          Length = 279

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|289207524|ref|YP_003459590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thioalkalivibrio sp. K90mix]
 gi|288943155|gb|ADC70854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thioalkalivibrio sp. K90mix]
          Length = 283

 Score =  232 bits (593), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 87/263 (33%), Positives = 118/263 (44%), Gaps = 7/263 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L   TGL +  +I          QR        R    E I  ILG R F+
Sbjct: 23  EPGLEARLLLGAATGLDTSALIARGLEAPTASQRERADALCRRRETGEPIAHILGRRAFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +S     PRPETELLV+ A+A            R+LDLGTG+GA+ LAL  E P 
Sbjct: 83  TLDLGISPACLIPRPETELLVERAIAAIDACERAHP--RVLDLGTGSGAIILALKAERPA 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            + V  D S  AL  A++NA   G+      LQ  W    +    FDVIVSNPPYI    
Sbjct: 141 IEAVATDRSPDALRQARANADALGLD--VAFLQGTWLDPFKPSDAFDVIVSNPPYIAPDD 198

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 ++R F+PR +L     GL    TI D    HL       +E G++Q  DV    
Sbjct: 199 PHLTRGDLR-FEPREALAAPEAGLGDLYTIIDTALTHLLPGAPLLLEHGFDQARDVRVCM 257

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
           E      V + +D  G++R+ + 
Sbjct: 258 EQEGYREVQSLRDPAGHERITIG 280


>gi|111018483|ref|YP_701455.1| HemK family methyltransferase [Rhodococcus jostii RHA1]
 gi|110818013|gb|ABG93297.1| probable methyltransferase, HemK family protein [Rhodococcus jostii
           RHA1]
          Length = 309

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 14/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++ + P  ++D+         + +  K   +  ILG     ++ +
Sbjct: 28  DAELLAAHLLGVERTRLGLVP--LVDESVIDAYKKMVDQRAKRIPLQYILGTAAMGDIDI 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL+  ALAF     +   V  +LDL TG+GA+ LA+    P     
Sbjct: 86  EVGPGVFVPRPETELLLGWALAFLGSCDQHPPV--VLDLCTGSGALALAIANARPDAVVH 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V++   AL  A+ NA     +        + D       + +EG  D+IV+NPPYI   
Sbjct: 144 AVELEPHALAWARRNADAREQAGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEG 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +   L  EV D DP  +L  G DGLS  + +   V+R L   G   +E   +   DV  +
Sbjct: 204 V--ELEPEVADHDPHSALFAGPDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGADVAAL 261

Query: 239 FESRKLF-LVNAFKDYGGNDRVLLFCR 264
           F SR++F  V    D  G  R ++  R
Sbjct: 262 FASRRVFGEVAEHPDLAGKPRFVVARR 288


>gi|295425485|ref|ZP_06818178.1| protein-(glutamine-N5) methyltransferase [Lactobacillus
           amylolyticus DSM 11664]
 gi|295064824|gb|EFG55739.1| protein-(glutamine-N5) methyltransferase [Lactobacillus
           amylolyticus DSM 11664]
          Length = 280

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    GL+  +  +  D  L D Q       I +  K  S   ILG+  F   ++
Sbjct: 23  DIDYVLGERLGLTPSEFELKQDLELSDAQVKQANKDIKKLAKGISPQYILGYAWFLGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV+ AL          +  ++LDLGTG+G + +AL KE+      
Sbjct: 83  MVQRGVLIPRFETEELVEWALKSL------HNGDQVLDLGTGSGCIAIALAKEAEKKHIA 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D++  AL IA+ N +T  V             +    FD I+SNPPYI+   V
Sbjct: 137 DLHLTISDVTDTALRIAEENLLTYSVDALVRKANCLIGLA---KFDKIISNPPYIKKSEV 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             +   V   +P  +L GG DGL  YR  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 194 KDMDQNVLQNEPDTALFGGDDGLDFYRKFAKEVRDHLNSHGEFFMEFGFSEEQQLRELFS 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                F +   KD  G  R++   
Sbjct: 254 AELPDFEIEFRKDMAGKPRMIHGR 277


>gi|296447418|ref|ZP_06889343.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylosinus trichosporium OB3b]
 gi|296255038|gb|EFH02140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Methylosinus trichosporium OB3b]
          Length = 304

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 89/256 (34%), Positives = 136/256 (53%), Gaps = 2/256 (0%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  RD+ + L     +++  ++++P + L    +  L +   R    E + RILG R F+
Sbjct: 30  EPRRDARALLLAAGEMTAADLLLEPHARLSPCVQRRLDDFARRRAAREPVTRILGARGFW 89

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              L ++ D  +PR +TE LV  ALA  L R  + D + ILDLG G+GA+  ALL E P 
Sbjct: 90  TQDLVVAPDVLDPRADTETLV--ALALDLLRERRNDALTILDLGVGSGAITCALLSELPQ 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VGVD+S +A   A  N    G++ R   L+  W  ++E  FD++VSNPPY+ S  + 
Sbjct: 148 ARAVGVDLSGEACAAASVNIARCGIAARATILRGRWAQALETRFDLVVSNPPYVASGEIA 207

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR  DP ++LDGG DGL+ YR I   + R L    L  +E G  Q   +  + E+
Sbjct: 208 TLAPEVRLHDPSLALDGGADGLACYREIIADLPRILAPHALAVLEAGAGQAASIAALLEA 267

Query: 242 RKLFLVNAFKDYGGND 257
             L +    +D+ G +
Sbjct: 268 AGLEIAEIREDFAGCE 283


>gi|206603662|gb|EDZ40142.1| Modification methylase (HemK) [Leptospirillum sp. Group II '5-way
           CG']
          Length = 293

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 91/267 (34%), Positives = 133/267 (49%), Gaps = 12/267 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           + R+S   L  + G            VL D       + + R  + E  H I G   F  
Sbjct: 33  SARESRDLLGELLG-DPLAAWTRDREVLPDELSACYASWVERRCQREPFHLITGSVPFLE 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++  T  PRPETE+LV++ L      ++ R   RILDLG G+G + ++LLKE P  
Sbjct: 92  DRYAVAPGTLVPRPETEILVENVLRV----LDSRSPQRILDLGCGSGVLGISLLKEFPKA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIV 180
           + + VD S   LE+++ NA+ +GV  R   +  DW     ++  FD+IVSNPPYI S  +
Sbjct: 148 RCLAVDRSVMPLEVSRKNALFHGVQSRIHFIHGDWTEMLRLDQRFDLIVSNPPYIASGDI 207

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR--- 237
            CL  E+  ++PR +LDGG DGL  YR +   +   L+  G+ +VEIG  Q         
Sbjct: 208 ACLDPEILFYEPREALDGGPDGLVFYRRLMAVLPGLLSSGGVAAVEIGSCQGDFFRSEEG 267

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I       LV  F D  G DR++L+ +
Sbjct: 268 IVSGCGGPLV--FPDILGLDRIVLWKK 292


>gi|281200544|gb|EFA74762.1| hypothetical protein PPL_11794 [Polysphondylium pallidum PN500]
          Length = 437

 Score =  232 bits (593), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/278 (35%), Positives = 134/278 (48%), Gaps = 21/278 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A+ DS   +  V  L  +  I  P   L D Q    +  I R  K E I  I+G+R F+ 
Sbjct: 158 AILDSRILIEHVLQLKPNARI-PPTLNLTDSQYQQFSELISRRFKDEPIAYIVGYRYFWK 216

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +      T  PRP++E L+D  +   L   E      ILDLGTGTG + L+LL E P  
Sbjct: 217 HQFRCDRSTLIPRPDSETLIDQIVM--LREYENFSPTNILDLGTGTGCLLLSLLNEFPNA 274

Query: 123 KGVGVDISCKALEIAKSN-------------AVTNGVSERFDTLQSDWFSSV--EGLFDV 167
            GVGVD S  ALEIAK N             +  N ++ R + +QS+W SS+     + +
Sbjct: 275 TGVGVDQSLDALEIAKYNSISIDKQNSSDNNSSNNIINNRVEFIQSNWLSSLSNNKKYQL 334

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV--SRHL-NKDGLCS 224
           I+SNPPYI       L   V+ F+P+ +L    +GL  Y  IA  +     L   +GL  
Sbjct: 335 IISNPPYISHSDYINLNPTVKLFEPKTALVADNNGLKDYEIIAKSIVDKDILDRDNGLVV 394

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            EIG NQ+ D+++I ES    L    KD G   R L+F
Sbjct: 395 FEIGMNQENDIIKIMESNGFELKCQGKDLGRIIRCLVF 432


>gi|163755416|ref|ZP_02162536.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1]
 gi|161324836|gb|EDP96165.1| putative protoporphyrinogen oxidase [Kordia algicida OT-1]
          Length = 289

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 11/260 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                   L    + +DP+  +   Q   +  A+      + I  ILG   F+ +   ++
Sbjct: 29  MLTEAYFNLERFTLALDPEFTISKEQETPMFQALSELKLEKPIQHILGKAHFFGLDFIVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             T  PRPETE LV   L  ++    K   +RILD+GTG+G + +AL K  P      +D
Sbjct: 89  EHTLIPRPETEELVALILE-NIKYSSKSKNLRILDIGTGSGCIPIALKKNLPDANIFAID 147

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVD 181
           IS +AL++A+ NA  N VS   + +++D  S       S +  FD+IVSNPPY+ ++   
Sbjct: 148 ISAEALKVARKNAENNDVS--VEFVKADVLSLEDLNIFSEKKYFDIIVSNPPYVRNLEKA 205

Query: 182 CLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P  +L     + L  Y  IAD    HL K+G    EI      +++ + E
Sbjct: 206 AMRKNVLDYEPETALFVEDKNPLIFYDKIADLAKAHLVKNGSLYFEINQYLGKEMMELME 265

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
            +    +    D  G DR++
Sbjct: 266 EKDFSTIELHGDTFGVDRMI 285


>gi|91069911|gb|ABE10840.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone ASNC2150]
          Length = 289

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 126/264 (47%), Gaps = 11/264 (4%)

Query: 8   HSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVR--SLKHESIHRILGWRDFYN 62
              L  +  +S+  +   I++P+  L  ++      ++     ++   I  + G   + +
Sbjct: 27  EVLLDCIGDISTKDLNLKILNPNGNLHLKKNLDFLESVWEDHLIRSCPIQYLCGITYWRD 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L +++    PRPETEL+VD        + EK   +   +LGTG+GA+ +AL    PF 
Sbjct: 87  LKLKVTNKVLIPRPETELIVDIVFNVFRRKSEK---LFFAELGTGSGAISIALALSYPFS 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVI 179
           +GV  DI   ALEIA  N + +           +W+S +E   G  D+ +SNPPYI    
Sbjct: 144 EGVATDIDQDALEIANKNYINSSKQSNLKFYCGNWWSPLENFKGKLDLAISNPPYIPKDT 203

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  EV++F+P+++L GG DGL H R I       L + G   +E  ++Q   V ++F
Sbjct: 204 YEKLPKEVKNFEPKVALLGGEDGLKHIREIIQKAPIFLKEKGWLILENHFDQGEKVKQLF 263

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
              K   +   KD  G  R  +  
Sbjct: 264 IKNKFTSIEIVKDLSGIGRFTIGR 287


>gi|303237986|ref|ZP_07324529.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella disiens FB035-09AN]
 gi|302481776|gb|EFL44828.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella disiens FB035-09AN]
          Length = 285

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 4/267 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    GL+   +  D  + L       L   ++R    E I  +LG   F 
Sbjct: 18  EARAIVRMVLEDHFGLTLADIYTDKVTELSADDVNELEKIMLRLETGEPIQYVLGSARFC 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +  +      PRPETELL    +         ++    +R+LD+GTG+G + + L  +
Sbjct: 78  GRQFGVGKGVLIPRPETELLCQWVMESHDCPFCGLQPPAPLRLLDIGTGSGCIAITLALD 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    D+S  AL IA++NA+  G +  F    +   ++ E +FD+IVSNPPYI   
Sbjct: 138 MANTVVSAYDLSSDALLIARNNAIRMGAAVNFQLKDALEMTATEEMFDIIVSNPPYICEN 197

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V +F+P  +L     D L  YR IA      L+  G    EI  +   DV  
Sbjct: 198 ERTEMLPNVLNFEPSTALFVPNDDPLRFYRAIAQYGQTALSHGGELYFEINEHYGEDVST 257

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +     +    D  G  R +   R
Sbjct: 258 MLNTLGYVEIEVRNDQFGKQRFVKALR 284


>gi|284037819|ref|YP_003387749.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
 gi|283817112|gb|ADB38950.1| modification methylase, HemK family [Spirosoma linguale DSM 74]
          Length = 282

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 6/259 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L    GL    V+ D     +  +  +    + R  + E I  ++G   F 
Sbjct: 22  EAREMAFMLLDHYFGLRKTDVLTDKPLPPNRTEPDWFK-ILERLNRQEPIQHVIGTTIFC 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S D   PRPETE LV   +     R++      ILD+GTG+G + + + +  P 
Sbjct: 81  GLEFEVSPDVLIPRPETEDLVRLIMHDFADRVDDVP---ILDIGTGSGCIAITMARFLPQ 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIV 180
               G D+S KAL +A+ NA       +F      +  +     FD +VSNPPY+     
Sbjct: 138 SVVTGWDVSEKALTLARQNAEHLKADVQFSIQDILNVPADFNERFDCVVSNPPYVTRSEA 197

Query: 181 DCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V D++P ++L     D L  Y+ +AD   RHL KDG C VEI         ++F
Sbjct: 198 AEMDRNVLDYEPDLALFVEDNDPLVFYKAVADFCVRHLTKDGACYVEINERFGEATRQVF 257

Query: 240 ESRKLFLVNAFKDYGGNDR 258
             R    +  +KD  G DR
Sbjct: 258 ADRGFTKIQVYKDIHGKDR 276


>gi|221639322|ref|YP_002525584.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131]
 gi|221160103|gb|ACM01083.1| Modification methylase, HemK family [Rhodobacter sphaeroides KD131]
          Length = 278

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+   +  + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARVARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALA--------EPFATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V+   D  G DR++   
Sbjct: 253 AGLAQVSVLPDLDGRDRLVSAR 274


>gi|108804487|ref|YP_644424.1| HemK family modification methylase [Rubrobacter xylanophilus DSM
           9941]
 gi|108765730|gb|ABG04612.1| modification methylase, HemK family [Rubrobacter xylanophilus DSM
           9941]
          Length = 280

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 132/258 (51%), Gaps = 7/258 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  + G+   +V++  +  L           I R LK E + RILG+  F N++L 
Sbjct: 24  AQVLMSELLGVRRGEVLLR-EEPLSPEDAARYERWISRRLKREPVQRILGYAYFRNLKLY 82

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L+ DT  PRP+TE +V++AL     R      +R+LD+GTG+GA+ +A+ +E P  +   
Sbjct: 83  LNEDTLIPRPDTESVVEAALERIDAR-----PLRVLDIGTGSGAIAIAIAQERPGCEVHA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-SVIVDCLGL 185
            DIS +ALEIA+ NA  NG   RF          + G  D++VSNPPY++       L  
Sbjct: 138 TDISRRALEIARRNADLNGARVRFHLADLVSGLRLPGGVDLLVSNPPYVDVRGAQRRLAP 197

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR++DP I+L  G D  + +R I +     L ++    +E+G  Q   V+ + E R   
Sbjct: 198 EVREWDPPIALYSGEDEYAFFRRIFEETPEVLKEEADVVLEVGDGQSQKVLEMGEERGFR 257

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +   +D  G+ R +L  
Sbjct: 258 PLGTRRDLAGDVRAVLLR 275


>gi|220934410|ref|YP_002513309.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995720|gb|ACL72322.1| modification methylase, HemK family [Thioalkalivibrio sp. HL-EbGR7]
          Length = 303

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 7/250 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L         D+ L   +R  + + +++ +   +    ++    F
Sbjct: 37  NALDEAAWLVLHALHLGHDLPPAYLDARLSREERARVADLLLQRVSTRKPAAYLIREAWF 96

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A   P I+   V R+LDL TG+G + +A     P
Sbjct: 97  AGLSFYVDERVLVPRSPIAELIEQGFA---PWIDPERVERVLDLCTGSGCIGIACAHAFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    DIS  AL +A+ N   +GV++R   ++SD F  + G  +D+IVSNPPY+++  
Sbjct: 154 DARVDLSDISPDALAVARENIRRHGVADRVRAIRSDLFEGLAGERYDLIVSNPPYVDAAD 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P + L  G DGL     I      HLN  G+  VE+G +Q   ++   
Sbjct: 214 MAALTPEFR-HEPVLGLASGEDGLDATLRILRDAPEHLNPGGILVVEVGNSQ-EALMARL 271

Query: 240 ESRKLFLVNA 249
               L  +  
Sbjct: 272 PDAPLTWLEF 281


>gi|15805280|ref|NP_293969.1| hemK protein [Deinococcus radiodurans R1]
 gi|6457913|gb|AAF09827.1|AE001885_11 hemK protein [Deinococcus radiodurans R1]
          Length = 278

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V GL+    ++     +         ++I R      +  + G  ++  VRL
Sbjct: 25  DARLLLEHVLGLNRTAFLLRGGEEIGPDAEARAWDSIERRAARVPLQHLTGEVEWGGVRL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T  +    PRPET    +  L  +L  + + +  R+LD+GTGTGA+ L L    P  +  
Sbjct: 85  TSDARALVPRPET----EWLLHLALEELRRVEKPRVLDVGTGTGALALGLKAAIPQAEVT 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+S +AL +A+ NA  +G+      ++    + + G F++IVSNPPY+ +        
Sbjct: 141 ATDLSPEALSLARENAALSGLD--VKFVEGSLLAGLSGPFNLIVSNPPYLPTADRATADP 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR  DP ++L  G DGL   R +    +  L   G   +E+       +     +    
Sbjct: 199 EVR-HDPDLALYAGEDGLDVARPLVAEAAAALVPGGALLLELDPRNAPTLAAELRTAGW- 256

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                 D  G +R +   R
Sbjct: 257 QAEVRPDLTGRERFVRARR 275


>gi|16330666|ref|NP_441394.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803]
 gi|2829611|sp|P74003|HEMK_SYNY3 RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.Ssp6803HemKP
 gi|1653158|dbj|BAA18074.1| protoporphyrinogen oxidase [Synechocystis sp. PCC 6803]
          Length = 299

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 101/263 (38%), Gaps = 8/263 (3%)

Query: 9   SFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
             L   T L    +        +  L +           R  +   +  +LG   + +  
Sbjct: 34  WLLQGWTDLDRLTLRLQDFAHREIALQETWENIQRGWRRRVEEKYPVQYLLGQTQWRDFV 93

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           + ++ D   PRPETEL++D                  +DLGTG+GA+ L L    P    
Sbjct: 94  IKVTDDVLIPRPETELIIDIVQHEHSALSPSNCADHWVDLGTGSGAIALGLAATFPQALV 153

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVD 181
             VD S  AL IA+ NA  N   +R    Q  W+  +E   G    +VSNPPYI    + 
Sbjct: 154 HAVDCSGSALAIARENAQLNQFGDRIQFHQGYWWEPLEHLKGQVQGMVSNPPYIPQRELA 213

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   +P ++LDGG DGL     +      +L   G   VEI   Q   V  +  +
Sbjct: 214 QLQPEVIKHEPLLALDGGPDGLQAVEQLIRRSPTYLKPGGFWLVEIMTGQAPMVAELLRA 273

Query: 242 RK-LFLVNAFKDYGGNDRVLLFC 263
                 +   +D    +R +   
Sbjct: 274 SGAYQDIQIHRDLASIERFVSAR 296


>gi|82703753|ref|YP_413319.1| HemK family modification methylase [Nitrosospira multiformis ATCC
           25196]
 gi|82411818|gb|ABB75927.1| [protein release factor]-glutamine N5-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
          Length = 286

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 122/258 (47%), Gaps = 7/258 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V  ++   ++  P+  L   Q         R    E +  + G R+FY+
Sbjct: 18  ADIDARMLLQYVLDVNHAYLLAHPEQKLTAEQAQAFYLLTGRRTLGEPVAYLTGRREFYS 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++     PRPETELL+D ALA    RI  +   RILDLGTG+GA+ L L    P  
Sbjct: 78  LEFNVTPAVLVPRPETELLIDLALA----RIPPQRPCRILDLGTGSGAIALTLATHRPLA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           K   VD+S  A+ +A +NA    +      +++DWF  V G  FD+IVSNPPYI      
Sbjct: 134 KVTAVDVSAAAVAVANANAARFSL-NNVRVIEADWFEGVAGESFDLIVSNPPYIAGDDPH 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               ++R F+P+I+L    +GL   R I D    HL  +G   +E GY+Q      +   
Sbjct: 193 LAQGDLR-FEPQIALVAPSEGLGCIRLIIDSAPAHLAPEGSLLLEHGYDQAEACRCLLRE 251

Query: 242 RKLFLVNAFKDYGGNDRV 259
                V +  D  G  RV
Sbjct: 252 AGFREVFSQPDLAGIMRV 269


>gi|86742400|ref|YP_482800.1| HemK family modification methylase [Frankia sp. CcI3]
 gi|86569262|gb|ABD13071.1| modification methylase, HemK family [Frankia sp. CcI3]
          Length = 338

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 9/269 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V  +   ++ +  D  +       L   + R  +   +  + G   F +
Sbjct: 64  PRADAEQLAAFVLAVPRGRLALLDD--VTAAAARRLDELVARRAQRVPLQHLTGVAGFRH 121

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPF 121
           + LT+    F PRPETE +V+ AL         +R     +DL  G+GA+ L+L  E P 
Sbjct: 122 LDLTVGPGVFIPRPETESVVEWALTELTGSAGARRPGPLCVDLCAGSGAIALSLAAELPG 181

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-----SDWFSSVEGLFDVIVSNPPYIE 176
                V++   A+   + N    G+              +  + + G  D+I+SNPPY+ 
Sbjct: 182 ATVHAVEVDPAAVVWLRRNIAGTGLPVTAHAADIAAALPESLTRLAGTVDLIISNPPYLP 241

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 +  EV + DP  +L GG DGL   RT+    +R L   GL  +E      V   
Sbjct: 242 DADRHTVEPEVGEHDPARALWGGPDGLDVVRTVVGVAARLLRPGGLLVIEHADGHGVSAP 301

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            +  +      V  ++D  G DR +   R
Sbjct: 302 ELLRADGRWSHVADYRDLAGRDRFVAGRR 330


>gi|119486657|ref|ZP_01620707.1| Modification methylase HemK [Lyngbya sp. PCC 8106]
 gi|119456274|gb|EAW37406.1| Modification methylase HemK [Lyngbya sp. PCC 8106]
          Length = 304

 Score =  232 bits (592), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 13/272 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIV-----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           R+    L    GL    + +      P+  L    R F+     R  +   +  + G   
Sbjct: 31  REVDGLLQEWVGLDRLTLRLGSFKDQPEINLRLPWREFMQLWERRVKERVPLQYLTGVAG 90

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLAL 115
           + +  LT+S     PRPETEL+VD  +     + +       +   +DLGTG+GA+ L L
Sbjct: 91  WRHFGLTVSPAVLIPRPETELIVDLVVGLIQRQSQICDQNLQLGHWVDLGTGSGAIALGL 150

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNP 172
                      VD S +AL IA+ NA   G ++R    Q  W+  ++   G    +VSNP
Sbjct: 151 ASVLTEASIHAVDCSREALAIAQKNAQDLGFADRIAFYQGRWWEPLDCLRGKVSGMVSNP 210

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI + ++  L  EV   +P ++LDGG  GL   + +      +L+  G+  VE+   Q 
Sbjct: 211 PYIPTAMLSTLQPEVARHEPHLALDGGESGLDCIQHLVQTAPAYLHSGGVWLVEMMAGQG 270

Query: 233 VDVVRIFESRK-LFLVNAFKDYGGNDRVLLFC 263
             VV + + +     +   +D  G +R +L  
Sbjct: 271 EQVVELLKDQGCYTQIEQIRDLAGIERFVLAR 302


>gi|305667254|ref|YP_003863541.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
 gi|88708188|gb|EAR00426.1| protoporphyrinogen oxidase [Maribacter sp. HTCC2170]
          Length = 481

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 76/253 (30%), Positives = 120/253 (47%), Gaps = 9/253 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +     L    + + P  ++   +   L  A+ +      I  ILG   F N+   ++ +
Sbjct: 31  IEHYLKLERFVLALQPSLIIKKEEEQPLFEALSQLKLERPIQYILGLTQFMNLEFKVNEN 90

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV   ++        +  + ILD+GTG+G + ++L K  P  K   +DIS
Sbjct: 91  VLIPRPETEDLVRWIVSDL---EHGKSEINILDIGTGSGCIAVSLAKLLPNSKVYALDIS 147

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            KALE+AK NA+ N V    + LQ+D  +   +   FDVIVSNPPY+  +    +   V 
Sbjct: 148 NKALEVAKKNAILNQVE--VEFLQADVLTLKELHLKFDVIVSNPPYVRMLEKTEMNKNVL 205

Query: 189 DFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           D +P ++L     D L  YR I D    +L+++G    E+      +   + +S     V
Sbjct: 206 DNEPELALFVEDNDALVFYRKIVDFAKENLDQNGSLYFEVNQYMGEETKSLLKSY-FSEV 264

Query: 248 NAFKDYGGNDRVL 260
              KD  GN+R+L
Sbjct: 265 ELRKDIFGNNRML 277


>gi|170078207|ref|YP_001734845.1| methyltransferase, methylase of peptide chain release factors
           [Synechococcus sp. PCC 7002]
 gi|169885876|gb|ACA99589.1| methyltransferase, methylase of peptide chain release factors
           [Synechococcus sp. PCC 7002]
          Length = 291

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 10/268 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
           ++ +   FL  +T +    + +   ++V        L+    R  + +  +  ++G   +
Sbjct: 27  SVEEVDWFLQGLTTVDRLSLWLGIREAVQSQVSLVELSRLWERRCQEKIPVQYLVGKTPW 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N  L +S     PRPETE L+D A A              +DLGTG+GA+ L L    P
Sbjct: 87  RNFELVVSPAVLIPRPETEYLIDLAQASHRDL----HAGHWIDLGTGSGAIALGLADSFP 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177
             K   VD S  ALE+A+ NA+  G  +R      +W+  ++   G    +VSNPPYI +
Sbjct: 143 NGKIHAVDQSAAALEVARKNAIAYGSQDRIQFYHGNWWEPLQHLRGQVTGMVSNPPYIPA 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++  L  EV   +P  +LDGG+DGL+  R + +    +L   G+  VE+   Q   V +
Sbjct: 203 ALLPDLQPEVYRHEPHSALDGGMDGLADLRILVNEAPDYLISGGIWLVELMRGQGETVAQ 262

Query: 238 IFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           +         +    D+ G DR +   R
Sbjct: 263 LLADNGHYTQIQIIHDFAGGDRYVSAQR 290


>gi|312873846|ref|ZP_07733889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2052A-d]
 gi|311090628|gb|EFQ49029.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2052A-d]
          Length = 279

 Score =  231 bits (591), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADALIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFTIEFKNDLAGKPRMVHGR 277


>gi|123967879|ref|YP_001008737.1| putative protein methyltransferase [Prochlorococcus marinus str.
           AS9601]
 gi|123197989|gb|ABM69630.1| putative protein methyltransferase [Prochlorococcus marinus str.
           AS9601]
          Length = 289

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 9/232 (3%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
                + ++RS     I  + G   + +++L +++    PRPETEL+VD        + E
Sbjct: 62  ESVWEDHLIRSC---PIQYLCGLTYWRDLKLKVTNKVLIPRPETELIVDIVFNIFRRKSE 118

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K   +   +LGTG+GA+ +AL    PF KGV  D+   ALEIA  N + +          
Sbjct: 119 K---LFFAELGTGSGAISIALALAYPFSKGVATDVDQDALEIATKNYINSSKQSNLKFYC 175

Query: 155 SDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            +W+S +E   G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL H R I  
Sbjct: 176 GNWWSPLENFKGKLDLAISNPPYIPKDTYEKLPKEVKNFEPKVALLGGEDGLKHIREIIQ 235

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
                L + G   +E  ++Q   V ++F   K   +   KD  G  R  +  
Sbjct: 236 KAPIFLKEKGWLILENHFDQGEKVKQLFIKNKFTSIEIVKDLSGIGRFTIGR 287


>gi|91081733|ref|XP_972117.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Tribolium castaneum]
          Length = 328

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 9/261 (3%)

Query: 5   RDS-HSFLCRVTGLSS-HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           R+S    L    G      V    D VLD+ +   + +  ++ L+   +  +LG   F  
Sbjct: 65  RESIEYILAHCLGTPRISDVYKYRDMVLDEDRVKLVESLCLKRLQKLPVQYVLGECYFRQ 124

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S   F PRPETE LVD  L      I++++    L+L  G+GA+ L+LL+E P  
Sbjct: 125 LVLKMSPPVFIPRPETEQLVDIVLG----EIDRKNCRHFLELCCGSGAIALSLLQERPQI 180

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           KG  +D S  A  + K NA   G+++R   +QS          FD+IVSNPPY+ S  +D
Sbjct: 181 KGTALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEKFDIIVSNPPYVFSKDLD 240

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E++ ++   +LDGG+DGL   + I +  S  LN +G   +E+       +      
Sbjct: 241 KLQPEIKLYEDLQALDGGVDGLKVIKQILELSSECLNMNGKLFLEVEPRHPTLLQDYLTE 300

Query: 242 R--KLFLVNAFKDYGGNDRVL 260
               L     +KD    DR +
Sbjct: 301 FVPGLAYAATYKDLYAKDRFV 321


>gi|167750128|ref|ZP_02422255.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702]
 gi|167656871|gb|EDS01001.1| hypothetical protein EUBSIR_01097 [Eubacterium siraeum DSM 15702]
          Length = 275

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 14/241 (5%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           P   + D Q     +   R    E +  ILG  +FY  +  +      PRPETELL D A
Sbjct: 38  PFEEITDAQLIECEDKAKRRKTGEPLQYILGNWEFYGRKYFVGEGVLIPRPETELLCDIA 97

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A       K      +DL +G+G + + +  E+   K VG++IS KA      N   N 
Sbjct: 98  KAHL-----KNTGGTAVDLCSGSGCIAVTVALEA-NVKAVGIEISDKAYGYFLKNIEQNK 151

Query: 146 VSERFDTLQSDWFS-SVEGLFDV-----IVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                  +  D F  ++ G F+      ++SNPPYI S  +  L  EV  F+P ++L GG
Sbjct: 152 AERSVTAINGDIFDKNILGRFEDDSLYAVLSNPPYISSADMKALQKEV-TFEPELALFGG 210

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR +    +  L   GL +VEIG  Q   V RIFE          +DY G+DR+
Sbjct: 211 EDGLDFYRRLIPMWAGKLRSGGLFAVEIGEEQGQAVSRIFEGAGF-NPEIIRDYSGHDRI 269

Query: 260 L 260
           +
Sbjct: 270 V 270


>gi|123965585|ref|YP_001010666.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9515]
 gi|123199951|gb|ABM71559.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9515]
          Length = 289

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 6/220 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            +  I  + G   + N++L +S     PRPETEL+V+     S      +  +   DLGT
Sbjct: 71  TNIPIQYLSGICYWRNLKLEVSDKVLIPRPETELVVEII---SRKFDNNKGQIIFADLGT 127

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163
           G+GA+ ++L  E+P + G+  DI+  A+EIA  N   N           +W+  +   +G
Sbjct: 128 GSGAISISLALENPSWNGIATDINKNAVEIASRNFANNSNQSNLKFYSGNWWEPLTYLKG 187

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             D  V+NPPYI     + L +EV++F+P+ +L GG DGL H R I      +L + G  
Sbjct: 188 EIDFAVANPPYIPKNTYEELPIEVKNFEPKNALLGGEDGLDHVREIVKYAPLYLKEKGWL 247

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            +E  ++Q   V ++F   +   V   KD  G  R  +  
Sbjct: 248 LIENHFDQGARVKQLFIENQFTDVEVLKDLSGIGRFTIGR 287


>gi|226360606|ref|YP_002778384.1| protein methyltransferase HemK [Rhodococcus opacus B4]
 gi|226239091|dbj|BAH49439.1| protein methyltransferase HemK [Rhodococcus opacus B4]
          Length = 309

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 120/267 (44%), Gaps = 14/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++ + P  ++D+         + +  K   +  ILG     ++ +
Sbjct: 28  DAELLAAHLLGVERTRLGLVP--LVDESVIDAYKKMVDQRAKRIPLQYILGTAAMGDIDI 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL+  ALAF     +   V  +LDL TG+GA+ LA+    P     
Sbjct: 86  EVGPGVFVPRPETELLLGWALAFLGSCDQHPPV--VLDLCTGSGALALAIANARPDAVVH 143

Query: 126 GVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V++   AL  A+ NA     +        + D       + +EG  D+IV+NPPYI   
Sbjct: 144 AVELEPHALAWARRNADAREQAGDAPIRLYQGDVTDRTLLAGLEGGVDLIVANPPYIPEG 203

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +   L  EV D DP  +L  G DGLS  + +   V+R L   G   +E   +   DV  +
Sbjct: 204 V--ELEPEVADHDPHSALFAGPDGLSVIKPMISNVARWLRIGGAVGIEHDDSNGSDVAAL 261

Query: 239 FESRKLF-LVNAFKDYGGNDRVLLFCR 264
           F SR++F  V    D  G  R ++  R
Sbjct: 262 FASRRVFGEVAEHPDLAGKPRFVVARR 288


>gi|332701397|ref|ZP_08421485.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332551546|gb|EGJ48590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 288

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 6/260 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G +   +++  +  L   +   +     R  K E +  I G R+FY +   
Sbjct: 28  AQVLAAFVLGCTRMDLLLHSERELSAAEVERIRALARRRAKGEPLAYIRGQREFYGLEFI 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE +++          +    +R  DLGTG+GA+ + +    P  +G+ 
Sbjct: 88  VRPGVLIPRPETEGIIEEV----RRLYDPDSCLRFADLGTGSGALGVTMGVVFPRARGLL 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           VD S  AL  A+ NA+ + V  R   ++ D+ S++      + I+SNPPYI    +  + 
Sbjct: 144 VDTSDVALRTARENALRHKVDSRVSVVKGDFMSALFRPRSLECIISNPPYIGESDLADVE 203

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V  ++PR +L  G  GL  Y  +A      L   G   +E+G++Q   +VRI      
Sbjct: 204 PAVLAWEPRSALIAGRSGLEAYPALAVRAWDALLPGGHMLLEMGWSQGSHLVRILRDVGF 263

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             +   +D  G+DR++   +
Sbjct: 264 CSIRVLQDLAGHDRIVAAVK 283


>gi|212550575|ref|YP_002308892.1| protein methyltransferase HemK [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548813|dbj|BAG83481.1| protein methyltransferase HemK [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 303

 Score =  231 bits (591), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 117/264 (44%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   S   L  V       ++ + +  L   +   +   I    +   I  ILG  +FY
Sbjct: 30  EAYSLSWLVLKFVCQKDKQTLLQNANERLPINKIIHIEIIINDLKRFRPIQYILGETEFY 89

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L ++ +   PRPETE LVD  +      +       ILD+GTG+G + LAL K  P 
Sbjct: 90  GIQLVVNENVLIPRPETEELVDLIIKKI--ALHNFSHCTILDIGTGSGCIALALAKYLPD 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            K   +DIS KALE+A+ NA  N +  +    Q D FS +       F VIVSNPPYI  
Sbjct: 148 TKIYALDISGKALEVARQNAQMNEM--KVIFFQQDIFSPLTQFCPTSFSVIVSNPPYITI 205

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                L   +  ++P  +L       L  Y  IAD   ++L  +GL   E        V 
Sbjct: 206 SEKKNLLPNILHYEPHQALFVPKEFPLIFYDRIADIGKQYLTANGLLFFETHAFFGQTVS 265

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
            + + +    V  FKD  G DR++
Sbjct: 266 SMLQKKGYQNVELFKDISGKDRMV 289


>gi|255038065|ref|YP_003088686.1| modification methylase, HemK family [Dyadobacter fermentans DSM
           18053]
 gi|254950821|gb|ACT95521.1| modification methylase, HemK family [Dyadobacter fermentans DSM
           18053]
          Length = 286

 Score =  231 bits (590), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 114/264 (43%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L     L +  V+VD        Q     N I R   +E +  I+G  +F 
Sbjct: 22  EAQAIAFMLLEHYMRLRNIDVLVDRPIADTTAQ-PDWDNIIKRLNNNEPVQHIIGSTEFC 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +SS    PRPETE LV      +    E    + ILD+GTG+G + + L +  P 
Sbjct: 81  GLEFRVSSAVLIPRPETEELVQMV---TRDYAEPDKNISILDIGTGSGCIAIVLARFLPH 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEG---LFDVIVSNPPYIES 177
                 D+S +ALE+A+ NA        F      +    + G    FD +VSNPPY+  
Sbjct: 138 VSVHAWDVSDEALEVARENARQLIADVTFAKQDMLNVAFPLPGNIVQFDCLVSNPPYVTY 197

Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              + +   V  F+P  +L     D L  Y+ IAD  + HL   G C VEI  +   +  
Sbjct: 198 SEAESMRPNVLRFEPHEALFVEDNDPLLFYKAIADFGTHHLKHGGKCYVEINEHFGAETK 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           ++FE R    V   +D  G DR +
Sbjct: 258 QVFEERNYIKVEILRDINGKDRFV 281


>gi|170062547|ref|XP_001866716.1| HemK methyltransferase family member 1 [Culex quinquefasciatus]
 gi|167880450|gb|EDS43833.1| HemK methyltransferase family member 1 [Culex quinquefasciatus]
          Length = 328

 Score =  231 bits (590), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 14/261 (5%)

Query: 10  FLCRVTGLS-SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            L  V  L     V  + D+VL D Q   +       +    +  I+   DF ++ L + 
Sbjct: 67  ILAHVLQLPCLGDVDKNKDAVLSDAQLAKIEELCECRIARMPVQYIIREWDFRDMTLKMV 126

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE LV+  L     +I+ +     L++G G+GA+ L+LLK+ P    + +D
Sbjct: 127 PPVFIPRPETEELVELIL----QQIDTQKEFSFLEIGCGSGAITLSLLKQVPKATAIALD 182

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCL 183
            S  A E+   NA     SE+    +      +        FD+IVSNPPY+ S  +  L
Sbjct: 183 QSKLACELTLENAKRYDFSEKLRIFKHKLVDKLPDELAGHRFDMIVSNPPYVPSGQLQRL 242

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
             EV+ ++   +LDGG DGL+  + I    S HL  +G+  +E+  +    +    E   
Sbjct: 243 DPEVKVYEDLRALDGGPDGLTVIKAILTIASDHLADEGILWLEVDTSHPPLIAGYLEEHG 302

Query: 243 ---KLFLVNAFKDYGGNDRVL 260
               L  V+++KD    +R +
Sbjct: 303 ERLGLRYVSSYKDLFRKERFV 323


>gi|163759876|ref|ZP_02166960.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43]
 gi|162282834|gb|EDQ33121.1| putative methyltransferase protein [Hoeflea phototrophica DFL-43]
          Length = 294

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 105/261 (40%), Positives = 146/261 (55%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   + R+  L+SHQ+  + D  L D  R  +  A    L  + +HRILG RDFY 
Sbjct: 32  ADLDARLLISRLADLASHQLATNGDLPLTDAVRGKIERAAGERLAGKPVHRILGTRDFYG 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L LS  T EPRP+TE L+D+ L F   R+ +     I+DLG G G + LAL+ E    
Sbjct: 92  LSLKLSGATLEPRPDTETLIDAVLPFVHDRVVQTGCCEIVDLGIGAGGIGLALVAECTQA 151

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +G+D+S +A+  A +NA   G+S R+  +  DWF  VE  FD+IVSNPPYI +  +  
Sbjct: 152 RCLGIDVSLEAVTTALTNARELGLSARYSAVTGDWFRGVEQHFDLIVSNPPYIPTADIAS 211

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   DP ++LDGG DGL  YR IA      L   G  ++EIG  Q+  V  +F ++
Sbjct: 212 LSREVVAHDPLLALDGGKDGLDAYRQIAAQCRTRLKSGGQVALEIGVGQRKSVTELFVAQ 271

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
           +  L     D GG DRVL+F 
Sbjct: 272 RFELSQVVADLGGVDRVLVFA 292


>gi|296268874|ref|YP_003651506.1| HemK family modification methylase [Thermobispora bispora DSM
           43833]
 gi|296091661|gb|ADG87613.1| modification methylase, HemK family [Thermobispora bispora DSM
           43833]
          Length = 284

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 13/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+S  ++    D   D R        I R    E +  I G   F  
Sbjct: 23  PRADAEEIAAFVHGVSRGRLHTVKDEDFDAR----FWEGIARREAREPLQHITGRAYFRY 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++   A+           +  ++DLGTG+GA+ L++ +E    
Sbjct: 79  LSLEVGPGVFVPRPETEVMTGWAIDRLREMDVASPI--VVDLGTGSGAIALSIAQEVALA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVI 179
           +   V+I   A   AK N + +G   R        +D    + G  D+++SNPPYI    
Sbjct: 137 QVHAVEIDPVAYSWAKKNVLEHG-QGRVFLHPEDLADCLPELNGQVDLVISNPPYIPPGE 195

Query: 180 VDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           V     EVRD+DP  +L G G DGL   R +     R L   G  +VE    Q   V  +
Sbjct: 196 VPR-DPEVRDYDPSRALYGSGEDGLGEIRAVERTARRLLRPGGYVAVEHAECQANAVYWL 254

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F E +    V   +D  G DR +   
Sbjct: 255 FAEEKGWRDVRTRQDLTGRDRFVTAR 280


>gi|254995297|ref|ZP_05277487.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Mississippi]
          Length = 285

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+     +  G+S+  ++VD D  ++  +       + R L  E +  ILG R+F+ 
Sbjct: 25  PRLDAELIAQQALGISAIAMLVDADMPVEQERADRFFALLDRRLSGEPVSHILGKREFWG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++SD  +PR +TE +V SA+        +   + I DLGTGTG + +ALL      
Sbjct: 85  MDFAVNSDVLDPRADTESVVSSAIKIYK---NQNRNLTIADLGTGTGCILIALLSHYRQA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  
Sbjct: 142 TGVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPG 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-S 241
           L  EVR  +P  +LDGG  G+  Y  I   + + L   G   +EIG +Q          +
Sbjct: 201 LQREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQSTIRDEALRWN 260

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                     D  G  R ++ 
Sbjct: 261 IGFCNYEY--DLAGRKRCIIL 279


>gi|329735678|gb|EGG71961.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU028]
          Length = 277

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  
Sbjct: 24  AEWLFLDVFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYK 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+GA+ + L    P    + 
Sbjct: 84  VNQHCLIPRPETEEVMLHFLEL------CKKTDTIADIGTGSGAIAITLKLLQPELNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL +AK NA      +    L+ +    +   +   D ++SNPPYI    +  +
Sbjct: 138 TDLYEDALNVAKQNASHYH--QNIQFLRGNALKPLIENDIKLDGLISNPPYIGHSEIIDM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V +++P  +L    +G + Y +I + +   + + G    EIGY+Q   + R+ +   
Sbjct: 196 ESTVLNYEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLY 255

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  FKD  GN R++
Sbjct: 256 PEKEVEIFKDINGNQRII 273


>gi|227529624|ref|ZP_03959673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
 gi|227350414|gb|EEJ40705.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus vaginalis ATCC 49540]
          Length = 286

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 9/258 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    G     ++V    ++   +  +   AI R L  E    I+G   FY     +
Sbjct: 28  QFLLKERHGWDDTHLLVHNRELMPSDEWQWFQGAIKRLLNEEPAQYIVGSAPFYGRTFMV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   P  ET  LVD  L  +         +++LDLGTG+G + + L  E P +     
Sbjct: 88  NHDVLIPEAETAELVDWVLKENTST-----PLKVLDLGTGSGVIGITLALERPQWNVTLS 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D+S  AL +A+ N     ++ R   +QSD F+++    +D+IV+NPPYI       +   
Sbjct: 143 DVSPAALMVAQKNMQRFNLNLR--LVQSDLFANLTNEKYDLIVTNPPYISHDATALMDRS 200

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLF 245
           V  ++P ++L    +GL  Y  +   ++ HL   G    E G++Q+  +  +     +  
Sbjct: 201 VLKYEPELALFADENGLGFYHRLFATIASHLTLQGQLFGETGFDQEQVIQELLHRVDRTA 260

Query: 246 LVNAFKDYGGNDRVLLFC 263
            +    D  G  R++   
Sbjct: 261 QIEPRHDVAGKMRMIHVW 278


>gi|62185242|ref|YP_220027.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila abortus S26/3]
 gi|62148309|emb|CAH64076.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 283

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           R++   L  V G+ S  QV+      L+          I +  +      I G   F  +
Sbjct: 24  REAVDILMDVLGITSRAQVLS---VRLNADTLHVYWTRIQKRAERFPTAYIHGSVRFLQL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L + S    PR ETELL +  + +         +    D+  G+G + L++ K  P  +
Sbjct: 81  DLEVDSRVLIPRMETELLAEKIIQYLTQH---PHIQTFYDVCCGSGCLGLSIKKYCPNVQ 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DI  KA+ +AK NA  N +  + D L+ D F+      D  V NPPY+    +   
Sbjct: 138 VILSDICPKAVAVAKINASKNHL--QVDVLEGDLFAPFSCPADAFVCNPPYLSFDEIMQT 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P  +L GG  GL  Y  IA  +   L   G+  +EIGY+Q   V RIF +  
Sbjct: 196 DPEVRCHEPWKALVGGSSGLEFYERIARDLDTILCPGGVGWLEIGYSQGERVKRIFANHG 255

Query: 244 LFLVNAFKDYGGNDRVLLF 262
           +   +  +D    DR+   
Sbjct: 256 VHG-SIHQDLSACDRIFFL 273


>gi|157105369|ref|XP_001648837.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti]
 gi|108880106|gb|EAT44331.1| protein-(glutamine-N5) methyl transferase, putative [Aedes aegypti]
          Length = 328

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 27/273 (9%)

Query: 6   DSHS--FLCRVTGL-------SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           D+     L  V  +         HQ     ++ L + Q   +       L    I  I+ 
Sbjct: 60  DASITNILAHVLKVQCLSDVNERHQ-----ETKLSEDQLAKIDELCECRLARMPIQYIIH 114

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
             +F ++ L +    F PRPETE L++  L     +I+ +  ++ L++G GTGA+ L++L
Sbjct: 115 EWEFRDLTLKMVPPVFIPRPETEELIELIL----QQIDAQKEMKFLEIGCGTGAISLSIL 170

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSN 171
           K +P    V +D S  A E+   NA  +G+ +     +      +        FD+IVSN
Sbjct: 171 KHAPQASAVALDQSTLACELTMENAKNHGLVDNLRIFRHKLVDKLPTELESHKFDMIVSN 230

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+ S  +  L  E++ ++   +LDGG DGL+  + I D   +HL   G+  +E+  + 
Sbjct: 231 PPYVPSRQLLALEPEIKVYEDLRALDGGPDGLTVVKAILDIAGKHLEPSGVLWLEVDSSH 290

Query: 232 KVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
              + +  E       L  ++++KD    +R +
Sbjct: 291 PPLIEKYLEEAVPELGLKFMSSYKDMFRKERFV 323


>gi|27468633|ref|NP_765270.1| protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
 gi|57867592|ref|YP_189288.1| HemK family modification methylase [Staphylococcus epidermidis
           RP62A]
 gi|251812172|ref|ZP_04826645.1| HemK family methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876475|ref|ZP_06285341.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis SK135]
 gi|293366081|ref|ZP_06612769.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27316180|gb|AAO05314.1|AE016749_260 protoporphyrinogen oxidase [Staphylococcus epidermidis ATCC 12228]
 gi|57638250|gb|AAW55038.1| modification methylase, HemK family [Staphylococcus epidermidis
           RP62A]
 gi|251804269|gb|EES56926.1| HemK family methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294727|gb|EFA87255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis SK135]
 gi|291319804|gb|EFE60162.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           epidermidis M23864:W2(grey)]
          Length = 278

 Score =  231 bits (590), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  
Sbjct: 25  AEWLFLDVFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+GA+ + L    P    + 
Sbjct: 85  VNQHCLIPRPETEEVMLHFLEL------CKKTDTIADIGTGSGAIAITLKLLQPELNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL +AK NA      +    L+ +    +   +   D ++SNPPYI    +  +
Sbjct: 139 TDLYEDALNVAKQNASHYH--QNIQFLRGNALKPLIENDIKLDGLISNPPYIGHSEIIDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V +++P  +L    +G + Y +I + +   + + G    EIGY+Q   + R+ +   
Sbjct: 197 ESTVLNYEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLY 256

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  FKD  GN R++
Sbjct: 257 PEKEVEIFKDINGNQRII 274


>gi|187734558|ref|YP_001876670.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Akkermansia muciniphila ATCC BAA-835]
 gi|187424610|gb|ACD03889.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Akkermansia muciniphila ATCC BAA-835]
          Length = 301

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 37/284 (13%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L  V   +   +    D  +++ +   L   + R    E +  +LG  +F+      
Sbjct: 28  QHLLAHVLHCNRTALYSQFDRPVEEAELAPLRELLKRRAAGEPLQHLLGVTEFFRRDFLT 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGV 125
            +    PRPETE LV+  L            VRILD+GTG+G + + L  E      + V
Sbjct: 88  DARALIPRPETEELVEMVLKKI-----PDHPVRILDMGTGSGVIGVTLALELKERAGEVV 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---------------------- 163
             DIS +AL++A  NA+  G   R  T+Q++ F+++                        
Sbjct: 143 LADISPQALDLALENAMRLGA--RVSTIQTNLFANISQEKTDPHAEDADSAPEGKKGENG 200

Query: 164 ---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
              LFDVIV+N PYI       L  EV   DP  +L GG  G             +LN+D
Sbjct: 201 RNMLFDVIVANLPYIAEGEK--LAPEVMK-DPHTALFGGPKGWEIIERFLARARDYLNED 257

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G  ++EIGY+Q   V +I +      +   KD  G  R     R
Sbjct: 258 GFVALEIGYDQASVVTQIMDGYGYNYIEVLKDMSGVSRFPFGYR 301


>gi|325911660|ref|ZP_08174067.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 143-D]
 gi|325476426|gb|EGC79585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners UPII 143-D]
          Length = 279

 Score =  231 bits (590), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +T  + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLN+DG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNQDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFAIEFKNDLAGKPRMVHGR 277


>gi|254495516|ref|ZP_05108440.1| methyltransferase, HemK family [Polaribacter sp. MED152]
 gi|85819872|gb|EAQ41029.1| methyltransferase, HemK family [Polaribacter sp. MED152]
          Length = 286

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 126/254 (49%), Gaps = 2/254 (0%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +     L    ++V  D  ++ ++   L NAI R  K E I  I+G  +F+     ++
Sbjct: 29  ILIDEFLDLKPVDLVVKSDFKINQQKLTDLNNAIDRLKKEEPIQYIIGHTEFFGYPFLVN 88

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGV 127
            +T  PRPETE LV   +         ++  + ILD+GTGTG + ++L KE P      +
Sbjct: 89  KNTLIPRPETEELVAWIIEEINNNNTYKNKNISILDIGTGTGCIPISLAKELPNATISAI 148

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S +ALEIAK NA+ N V+  F        S+++  +D+I+SNPPY+ ++    +   V
Sbjct: 149 DVSDEALEIAKKNALANKVNINFIEKDILNTSNLDDNYDIIISNPPYVRNLEKVEINNNV 208

Query: 188 RDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +P ++L     + L  Y  IAD    HL K+G    EI      + + + +++    
Sbjct: 209 LENEPHLALFVEDNNPLIFYNKIADLALYHLTKNGSLFFEINQYLGKETIALLKTKHYKA 268

Query: 247 VNAFKDYGGNDRVL 260
           +   KD   NDR+L
Sbjct: 269 IELRKDIFKNDRML 282


>gi|289550268|ref|YP_003471172.1| polypeptide chain release factors methylase [Staphylococcus
           lugdunensis HKU09-01]
 gi|289179800|gb|ADC87045.1| polypeptide chain release factors methylase [Staphylococcus
           lugdunensis HKU09-01]
          Length = 279

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +   +    ++     +   Q      A+ R L  E I  I+G++ FY     
Sbjct: 25  AEWLMLDLFHWTRTDYLMHMYDEMTIAQETKFNLAVQRMLLGEPIQYIVGFQSFYGYPFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ +   PRPETE ++   L              I+D+GTG+GA+ + + K +P  K + 
Sbjct: 85  VNENCLIPRPETEEVMLHFLNG------CHSQGSIVDVGTGSGAIAITIKKLNPQLKVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+  + L IA+ NA  + +      +Q D    +       D ++SNPPYI       +
Sbjct: 139 TDLYKETLTIAQENA--SYLDADIIFMQGDVLKPLIQKNIKVDGLISNPPYISEKETCQM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESR 242
              V  ++P  +L    +G + Y  I D + + LN+D   + EIGY Q + + ++  +  
Sbjct: 197 TNTVLKYEPHHALFAENNGFAIYEAILDDLPKVLNEDAFVTFEIGYQQGLQLKQLVLQRY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KD  G DR++ F
Sbjct: 257 PKLDVKVTKDINGLDRIVSF 276


>gi|291567205|dbj|BAI89477.1| N(5)-glutamine methyltransferase [Arthrospira platensis NIES-39]
          Length = 310

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 15/268 (5%)

Query: 10  FLCRVTGLSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           FL  +T L+   + +D     P   L+      +     R  +   +  +LG   + N  
Sbjct: 39  FLEALTDLTHLDIRLDSFGDRPSIQLNQPWSAIVKLWERRITERVPLQYLLGVVHWRNFA 98

Query: 65  LTLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           L +S     PRPETEL++D A+++      ++  I +      +DLGTG+GA+ L L   
Sbjct: 99  LKVSPAVLIPRPETELIIDIAVSYHAASSEAINSICQPGSGNWVDLGTGSGAIALGLASV 158

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI 175
            P      VD S  AL IA  NA + G   R    Q  W++ +    G    +V+NPPYI
Sbjct: 159 FPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGKVSGMVANPPYI 218

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S  +  L  EV   +P  +LDGG  GL     +     + L   G+  VE+   Q   V
Sbjct: 219 PSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWIVEMMAGQGQAV 278

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLF 262
             + ES      +    D  G DR  + 
Sbjct: 279 TSMLESAGCYRDIKILPDLAGIDRFAIA 306


>gi|312871652|ref|ZP_07731744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 3008A-a]
 gi|311092877|gb|EFQ51229.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 3008A-a]
          Length = 279

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +T  + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLSKEQLTQITKDLNKLHKGISPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADVLIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFAIEFKNDLAGKPRMVHGR 277


>gi|56417124|ref|YP_154198.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           St. Maries]
 gi|222475489|ref|YP_002563906.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Florida]
 gi|255003477|ref|ZP_05278441.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Puerto Rico]
 gi|255004602|ref|ZP_05279403.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Virginia]
 gi|56388356|gb|AAV86943.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           St. Maries]
 gi|222419627|gb|ACM49650.1| protein-(glutamine-N5) methyltransferase [Anaplasma marginale str.
           Florida]
          Length = 285

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 119/261 (45%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+     +  G+S+  ++VD D  ++  +       + R L  E +  ILG R+F+ 
Sbjct: 25  PRLDAELIAQQALGISAIAMLVDADMPVEQERADRFFALLDRRLSGEPVSHILGKREFWG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++SD  +PR +TE +V SA+        +   + I DLGTGTG + +ALL      
Sbjct: 85  MDFAVNSDVLDPRADTESVVSSAIKIYK---NQNRNLTIADLGTGTGCILIALLSHYRHA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  
Sbjct: 142 TGVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPG 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-S 241
           L  EVR  +P  +LDGG  G+  Y  I   + + L   G   +EIG +Q          +
Sbjct: 201 LQREVRQHEPLGALDGGTRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQSTIRDEALRWN 260

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                     D  G  R ++ 
Sbjct: 261 IGFCNYEY--DLAGRKRCIIL 279


>gi|312871966|ref|ZP_07732048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2062A-h1]
 gi|311092543|gb|EFQ50905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus iners LEAF 2062A-h1]
          Length = 279

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADALIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             D +   V   +P  +L  G DGL  YR     V +HLNKDG   +E G++QK  +  +
Sbjct: 192 EKDLMDQNVIKNEPEEALFAGADGLDFYRRFVKQVPKHLNKDGHFFLEFGFSQKDLLAEL 251

Query: 239 F-ESRKLFLVNAFKDYGGNDRVLLFC 263
           F +    F +    D  G  R++   
Sbjct: 252 FAKELPEFAIEFKNDLAGKPRMVHGR 277


>gi|270339624|ref|ZP_06005478.2| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM
           17361]
 gi|270334333|gb|EFA45119.1| protein-(glutamine-N5) methyltransferase [Prevotella bergensis DSM
           17361]
          Length = 301

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 4/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    GL+   ++      L    +  L+    R  K E +  +LG  DF 
Sbjct: 35  EAKAVVRLLLDEGFGLTLTDIMSGKADELPTSDKERLSVMADRLQKGEPVQYVLGRSDFC 94

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP---RIEKRDVVRILDLGTGTGAVCLALLKE 118
                +      PRPETE L    ++        ++    +++LD+GTG+G + + L   
Sbjct: 95  GRTFHVEPGVLIPRPETEELCQMIVSEYTKPYCALQPPVPLQVLDVGTGSGCIAVTLALG 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +    D+S +AL IA+ NA   G     +          +  +D++VSNPPYI + 
Sbjct: 155 LHNAEITAWDVSSEALIIARDNAHRLGAKVNLEWQDMLCPPEDDRQWDIMVSNPPYIANH 214

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +   V D++P  +L     D L  YR IA    R L K G    EI      ++  
Sbjct: 215 ERKAMSRNVLDYEPEQALFVPDDDPLRFYRAIATYARRTLKKGGKVFFEINPLYAEELQE 274

Query: 238 IFESRKLFLVNAFKDYGGNDRVLL 261
           +F  +        KD  G  R+ +
Sbjct: 275 MFHRQGFESTKLIKDSFGKQRIAI 298


>gi|284051235|ref|ZP_06381445.1| modification methylase, HemK family protein [Arthrospira platensis
           str. Paraca]
          Length = 310

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 113/268 (42%), Gaps = 15/268 (5%)

Query: 10  FLCRVTGLSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           FL  +T L+   + +D     P   L+      +     R  +   +  +LG   + N  
Sbjct: 39  FLEALTDLTHLDIRLDSFGDRPSIQLNQPWSAIVKLWERRITERVPLQYLLGVVHWRNFA 98

Query: 65  LTLSSDTFEPRPETELLVDSALAF------SLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           L +S     PRPETEL++D A ++      ++  I +      +DLGTG+GA+ L L   
Sbjct: 99  LKVSPAVLIPRPETELIIDIAASYHATSSEAINSICQPGSGNWVDLGTGSGAIALGLASV 158

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI 175
            P      VD S  AL IA  NA + G   R    Q  W++ +    G    +V+NPPYI
Sbjct: 159 FPQAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWAPLHSLKGKVSGMVANPPYI 218

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S  +  L  EV   +P  +LDGG  GL     +     + L   G+  VE+   Q   V
Sbjct: 219 PSQELPNLQPEVVYHEPHQALDGGESGLDCIHHLVQTAPQFLQPGGIWIVEMMAGQGQAV 278

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLF 262
             + ES      +    D  G DR  + 
Sbjct: 279 TSMLESAGCYRDIKILPDLAGIDRFAIA 306


>gi|320528630|ref|ZP_08029783.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei
           F0204]
 gi|320130996|gb|EFW23573.1| protein-(glutamine-N5) methyltransferase [Solobacterium moorei
           F0204]
          Length = 284

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 17/265 (6%)

Query: 7   SHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + + +  +  +S    + + +  D  + +         + R LK E +  +LG+  FY  
Sbjct: 22  AETVMAYLLEISQRERYDLFMHIDDEMPEELAKEFRVGMERILKQEPMSHVLGYSWFYGY 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           ++ ++ D   PR ETE L    L+        ++ V   D+GTG+GA+ + + KE    K
Sbjct: 82  KMIVNEDVLIPRCETEELCALILSRIDEIFPTQETVECADVGTGSGAIAITVAKEESRVK 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
               DIS +AL  A+ NA  N V    D    D    +       DV++SNPPYI     
Sbjct: 142 MHATDISEEALVTARQNAKNNEVD--IDFTAGDMLQPLIDANRHLDVLISNPPYIPQDE- 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD----VV 236
             +   V DF+P ++L GG DGL  YR I     + LNK    + E+G++Q+      V 
Sbjct: 199 -QMETSVVDFEPHVALFGGEDGLKFYRMIFKDCKKVLNKKAFMAFEMGWDQRERMSKLVE 257

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLL 261
            +    +       KD  G DR+L 
Sbjct: 258 ELLPDARY---EMLKDMNGKDRMLF 279


>gi|313837662|gb|EFS75376.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA2]
 gi|314927457|gb|EFS91288.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL044PA1]
 gi|314972602|gb|EFT16699.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA3]
 gi|328907543|gb|EGG27309.1| putative methylase [Propionibacterium sp. P08]
          Length = 291

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC   G+   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALGIQPSQLIRVASVHADDEDR--FNEMVDRRRAGEPAQFIVGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ +    F PR ETEL+ + A+  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRVEVGPGVFIPRLETELVAEQAVQEAQRLVMASACPSVVDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL  A+ N   +G     + L  D     +    FDV+V+NPPY+  +  
Sbjct: 143 RVSAVEMDEAALTWARRNLCDSG----VEILAGDALRVPDDGRRFDVVVTNPPYLRRIDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV   +P ++L  G DGL   R +    +  L   GL  +E    Q+ +++    
Sbjct: 199 SSIPDEVTGHEPDLALFSGDDGLDLPRQLVGRAAELLTAGGLFIMEHDETQRDELMTAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSHMWEQIEDHDDLAGRPRFVTARR 283


>gi|260584606|ref|ZP_05852352.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella elegans ATCC 700633]
 gi|260157629|gb|EEW92699.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella elegans ATCC 700633]
          Length = 291

 Score =  231 bits (589), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 7/260 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      +   +   +++  +          +   ++R    E +  I    +FY     
Sbjct: 35  ARQLSLYLNQWTMTDLLIHLNQPAKIGMWEQIELLLIRLSNFEPLQYITKQAEFYGREFI 94

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S DT  PRPETE LV+  +AF    + ++   ++L++G GTG +   L  E   F   G
Sbjct: 95  VSPDTLIPRPETEELVEKIIAF----LSEQSTGKVLEIGVGTGCIIHTLALECSDFSYQG 150

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
           VDIS  ALE+AK N     + E      SD F  V    F  I+SNPPYI+    + +  
Sbjct: 151 VDISEGALEVAKKNQEKYEL-ENVSLYLSDVFQEVSPHKFIAIISNPPYIDVSEKNVMDQ 209

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V  F+P ++L    +GL+ YR IA+ +  +L ++G    EIG+ Q   V ++FE     
Sbjct: 210 SVLRFEPEVALFAEDEGLAIYRMIAENLENYLLEEGQAFFEIGFQQGKAVQQLFEYYCPN 269

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V+  KD  GNDR+++  R
Sbjct: 270 RKVSVHKDLSGNDRMIIVGR 289


>gi|300741301|ref|ZP_07071322.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia dentocariosa M567]
 gi|300380486|gb|EFJ77048.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia dentocariosa M567]
          Length = 313

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 27/274 (9%)

Query: 6   DSHSFLCRVTG---------------LSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKH 48
           D+      + G               ++   V         +  +     T  + R  + 
Sbjct: 38  DAELLAAYLLGTGSQGIQRGSYGESSVTRADVQRFALMGLRITPQDSVRYTELLERRAQR 97

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +  I G   FY++ + +    F PRPETELLV+ AL   L   E     R++DL TG+
Sbjct: 98  VPLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEAL-RVLATYESNARPRVVDLCTGS 156

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLF 165
           GA+  A+ +E+P  +   V++S +AL  A+ N       +    +  D       + G F
Sbjct: 157 GAIAAAIKEENPQAEVFAVELSEQALLWARKNLD----PQNVHLIPGDIRTSLEDLPGYF 212

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCS 224
           D+++SNPPYI          EV ++DP+++L  GG DG+   R +       L   G   
Sbjct: 213 DLVLSNPPYIPPHRKPQ-APEVAEYDPQMALYGGGEDGMEIPREVIARAHYLLRPGGFFM 271

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +E   +Q+  V     ++    + + +D  G  R
Sbjct: 272 MEHDDSQETRVAETLAAQGFVSIYSIRDLNGKPR 305


>gi|325474791|gb|EGC77977.1| HemK family Modification methylase [Treponema denticola F0402]
          Length = 329

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/293 (24%), Positives = 128/293 (43%), Gaps = 36/293 (12%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +AL D+   +  +       ++   D       +      + +      I  + G +DF+
Sbjct: 32  EALFDADILIAHILKKERSWLLSHSDFDFLPY-KNEFEAFVQKRSSGIPIAYLTGTKDFF 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-- 119
                ++ +   P+P+TE LV+ AL F+  +++K + + +LD+ TG+G + L+L  E   
Sbjct: 91  GRTFYVNENVLIPKPDTETLVEHALNFAKEKLKKNESLFVLDICTGSGCIGLSLAAELYE 150

Query: 120 -----------------------PFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTL 153
                                    F  +  DIS +AL++ K N    + + + +R   +
Sbjct: 151 NLSQTSDAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDYLLPSALYKRVLAV 210

Query: 154 QSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ++D              +D+I +NPPY+ S +++ L  + R  +PR++LDGGI+GL    
Sbjct: 211 KADLHLPFPCVPESKRSYDLITANPPYVPSKLMESLLEDGRS-EPRLALDGGIEGLDLIP 269

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +A+     LN  G   VE+G         IF S     V   KD  GNDRV+
Sbjct: 270 PLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGNDRVI 322


>gi|58337081|ref|YP_193666.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM]
 gi|227903649|ref|ZP_04021454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus ATCC 4796]
 gi|58254398|gb|AAV42635.1| protoporphyrinogen oxidase [Lactobacillus acidophilus NCFM]
 gi|227868536|gb|EEJ75957.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus acidophilus ATCC 4796]
          Length = 280

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L     L+  +  +  D  L D Q       I +  K  S   ILG+  F   ++
Sbjct: 23  DVDYVLAERLNLTPSEFELKQDMTLSDDQIKQANKDIKKLAKGVSPQYILGYAWFLGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV  AL         ++   +LDLGTG+G + +ALLKE+      
Sbjct: 83  MVQRGVLIPRFETEELVTWALESL------KNGDTVLDLGTGSGCITVALLKEAEKKGIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D++  AL I++ N +   +     T +++    + G FD+I+SNPPYI++   
Sbjct: 137 DISMYASDVTDNALRISEENFLNYNLD--VTTRKANVLIGL-GKFDLIISNPPYIKTGEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
           + +   V   +P  +L GG DGL  YR  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 194 NEMDKNVLQNEPEEALFGGKDGLDFYRRFAKQVRAHLNSHGEFFLEFGFSEEDQLRELFA 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           E    F +   KD  G  R++   
Sbjct: 254 EELPDFDIEFRKDMAGKPRMVHGR 277


>gi|167751821|ref|ZP_02423948.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
 gi|167660062|gb|EDS04192.1| hypothetical protein ALIPUT_00063 [Alistipes putredinis DSM 17216]
          Length = 282

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 108/264 (40%), Gaps = 15/264 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A + +   +  + GL    ++ +PD  L   +   L   I        +  +LG  +FY
Sbjct: 23  EARQIARIIVMELGGLCLTDLVAEPDKELGINE---LDRIIGELAAGRPLQYVLGHTEFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE LV        P     D   +LD+GTG+G + + L +  P 
Sbjct: 80  GLDFQVREGVLIPRPETEELVRWIAESPAP-----DNPAVLDVGTGSGCIAVTLARLIPG 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIES 177
            +   VDIS KAL IA+ NA    +    D  Q D     F      FD+IVSNPPYI  
Sbjct: 135 ARVTAVDISEKALSIARENARR--LDAEVDFRQGDALGELFPGQREQFDLIVSNPPYIPR 192

Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                + + V  ++P  +L     D L  YR IA    R L   G    EI  N   + +
Sbjct: 193 REKASMRVNVTGYEPAEALFVEDDDPLIFYRAIARNARRLLRPGGRLYFEIHENFADETL 252

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           R+            +D    +R+ 
Sbjct: 253 RMLTREGFPDTAVRRDLNDKNRMT 276


>gi|282880495|ref|ZP_06289202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305598|gb|EFA97651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella timonensis CRIS 5C-B1]
          Length = 283

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 7/263 (2%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     G+S   +I    S L   +   L   I+R  + E +  ILG ++F 
Sbjct: 19  EAKALIRTVLEVRYGMSLTDIICGKVSELSTDECQSLQEIILRLQRFEPVQYILGVKEFA 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +S     PR ET  L    +     +  K     ILD+GTG+G + + L  E   
Sbjct: 79  GRTFHVSPGVLIPRDETAELCQWIVDTI--QESKLKSPTILDIGTGSGCIAITLSLEIQK 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K V  D+S  A+++A  NA   G +       +         +D+IVSNPPYI     +
Sbjct: 137 AKVVAWDVSTTAIQVANQNARDLGATVSIVCQNALNAPRDAMKWDIIVSNPPYICPTEAE 196

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V  ++P+ +L       L  Y  IA   +  L   G    EI    +  VV + +
Sbjct: 197 EMEPNVLSYEPKEALFVPENHPLLFYDAIAHYATTALKPHGKLYFEINPLYRKSVVEMLK 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           ++    V   KD  G +R++   
Sbjct: 257 NKGFIGVMIRKDAFGKERMVCAT 279


>gi|269958474|ref|YP_003328261.1| putative HemK family modification methylase [Anaplasma centrale
           str. Israel]
 gi|269848303|gb|ACZ48947.1| putative HemK family modification methylase [Anaplasma centrale
           str. Israel]
          Length = 282

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 7/261 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+     +  G+S+  ++VD D  ++  +       + R L  E +  ILG R+F+ 
Sbjct: 22  PRLDAELIAQQALGISAIAMLVDADMPVEQERADRFFALLDRRLSGEPVSHILGKREFWG 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++SD  +PR +TE +V SA+        +   + I DLGTGTG + +ALL      
Sbjct: 82  MDFAVNSDVLDPRADTESVVSSAIKIYK---NQNRNLTIADLGTGTGCILIALLSHYRHA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            GV  + S KA  +A+ N V + +  R     + W    EG FD+IVSNPPYI    +  
Sbjct: 139 TGVAFEKSVKAYRVARQNFVRHSMLARVKLRCASW-ERCEGKFDLIVSNPPYIRRCKIPG 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-S 241
           L  EVR  +P  +LDGG+ G+  Y  I   + + L   G   +EIG +Q          +
Sbjct: 198 LQREVRQHEPLRALDGGVRGMEAYTQIFKVLKKCLRPSGRAILEIGEDQSTIRDEALRWN 257

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                     D  G  R ++ 
Sbjct: 258 IGFCNYEY--DLAGRKRCIIL 276


>gi|329943004|ref|ZP_08291778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlamydophila psittaci Cal10]
 gi|332287586|ref|YP_004422487.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|313848160|emb|CBY17161.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506596|gb|ADZ18234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila psittaci 6BC]
 gi|328814551|gb|EGF84541.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Chlamydophila psittaci Cal10]
 gi|328914837|gb|AEB55670.1| HemK protein [Chlamydophila psittaci 6BC]
          Length = 283

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           R++   L  + G+ S  Q++      L+          I +  +      I G   F  +
Sbjct: 24  REAVDILMDLLGITSRAQILS---VRLNSDTLNMYWMRIQKRAERVPTAYIHGSVRFLEL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L + S    PR ETELL +  + +         +    D+  G+G + L++ K  P  K
Sbjct: 81  DLEVDSRVLIPRMETELLAEKIIQYLTQH---SHIQTFYDVCCGSGCLGLSIKKYCPNVK 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  DI  KA+ +AK NA  N +  + D L+ D F+      D  V NPPY+    +   
Sbjct: 138 VVLSDICPKAVAVAKINASKNNL--KVDVLEGDLFAPFSCPADAFVCNPPYLSFDEIMRT 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P  +L GG  GL  Y  IA  +   L+  G+  +EIGY Q   V RIF +  
Sbjct: 196 DPEVRCHEPWKALVGGSSGLEFYERIARDLDAVLHPGGVGWLEIGYRQGEAVKRIFANHG 255

Query: 244 LFLVNAFKDYGGNDRVLLF 262
           +   +  +D    DR+   
Sbjct: 256 VCG-SIHQDLSACDRIFFL 273


>gi|332671312|ref|YP_004454320.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas fimi ATCC 484]
 gi|332340350|gb|AEE46933.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas fimi ATCC 484]
          Length = 306

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 111/267 (41%), Gaps = 8/267 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ +      GL    +++ P   + +       + + R  + E +  I+G   F  
Sbjct: 25  PRVDATALAAHALGLDRLDLVLAP--PVPEGFAATYADLVDRRRRREPLQHIVGRTTFRW 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE++   A+  +   +       ++DL  G G + LA+  E P  
Sbjct: 83  LTLHVEPGVFVPRPETEVVAQVAVDEAARLVAAGTSPVVVDLCCGAGGLGLAVATEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           +   VD S  A+ + + NA   G   R    D   +   + + G  DV+VSNPPYI    
Sbjct: 143 RVAAVDASPAAVALTRRNAADAGADVRVLPGDVRDTGLLADLAGRVDVVVSNPPYIPP-D 201

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            + +  EVRD DP ++L  GG DGL   R +     R L   GL  +E    Q       
Sbjct: 202 AEPVDPEVRDHDPDLALYGGGADGLDVPRAVLAAAVRLLRPGGLLVMEHAEVQDGAARDA 261

Query: 239 FESR-KLFLVNAFKDYGGNDRVLLFCR 264
             +   L  V    D  G  R+L+  R
Sbjct: 262 AHATGGLVDVETRPDLTGRPRMLVARR 288


>gi|257457981|ref|ZP_05623140.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema vincentii ATCC 35580]
 gi|257444694|gb|EEV19778.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema vincentii ATCC 35580]
          Length = 318

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 28/283 (9%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           + D+   L          +    D+ +    R     A+ R      I  I G +DF+ +
Sbjct: 30  MLDADVLLQHFLNKPRAWLFAHDDADISP-IRETFCAAVERRSTGLPIAYITGEKDFWGL 88

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR----ILDLGTGTGAVCLALLKES 119
              +S D   P+P+TELLV+ +LA    + E          +LD  TG+G V +++L   
Sbjct: 89  SFKVSPDVLIPKPDTELLVERSLAVIKEKAEALRPPEQTLYLLDPCTGSGCVAISILYTL 148

Query: 120 P-----FFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDWFSSVEG-------- 163
                     V VDIS  AL IA+ NA          R   ++ D  S  E         
Sbjct: 149 EAEGIRNIVCVAVDISPAALAIARLNAERLLSAEAQRRLCFIEGDMRSLPETIGGVSQPL 208

Query: 164 ------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  FD+I +NPPY+ S +   L  + R+ +P ++LDGG DGL   R + +     L
Sbjct: 209 SVSKLLRFDLIAANPPYVPSDLTQELLKDGRN-EPALALDGGSDGLDFIRILTNNTRTVL 267

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           N  G+   E+G        ++FE+     +   +D  G DR++
Sbjct: 268 NGGGVLLSEVGEYHAQAASKLFETAGFSDIRIHQDLAGQDRLI 310


>gi|255975087|ref|ZP_05425673.1| modification methylase HemK [Enterococcus faecalis T2]
 gi|307285598|ref|ZP_07565737.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0860]
 gi|255967959|gb|EET98581.1| modification methylase HemK [Enterococcus faecalis T2]
 gi|306502822|gb|EFM72087.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0860]
          Length = 277

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEKQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|281356724|ref|ZP_06243215.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Victivallis vadensis ATCC BAA-548]
 gi|281316851|gb|EFB00874.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Victivallis vadensis ATCC BAA-548]
          Length = 282

 Score =  230 bits (588), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 118/260 (45%), Gaps = 10/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   +  + G+S  ++ +     +       +     R    E +  +LG   F +
Sbjct: 23  AAVDSDLLITELAGISRPELFLCAGEPVPAELERHIRELARRRANREPLQYLLGVAYFMD 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++     PRPETELL + A+          +   +LDLGTG+GA+ LA+  E P  
Sbjct: 83  LELEVTPAVLIPRPETELLAEYAVKHL------PEGGSMLDLGTGSGAIALAVAAERPDV 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+S  ALE+A+ N V  G   RF  LQSD FS + G  FD++ +N PY+      
Sbjct: 137 RITAVDVSSDALEVARRNRVRCGGEVRF--LQSDLFSELPGERFDLVGANLPYVTQEEYP 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR F+P+++L     G       A  ++ HLN  G    E+   Q   +  +F  
Sbjct: 195 ALEPEVRLFEPQLALTAPDGGFRLIERAARELADHLNPGGRAIFELSPPQAPRLAELFVK 254

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
                 ++   DY   DR +
Sbjct: 255 LGGFDEIDVLADYTRRDRFV 274


>gi|77463464|ref|YP_352968.1| putative methylase [Rhodobacter sphaeroides 2.4.1]
 gi|77387882|gb|ABA79067.1| Putative methylase [Rhodobacter sphaeroides 2.4.1]
          Length = 278

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALA--------EPFATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVASRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V+   D  G DR++   
Sbjct: 253 AGLARVSVLPDLDGRDRLVSAR 274


>gi|329734115|gb|EGG70433.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU045]
          Length = 277

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G S    ++  D  +       L  A+ R +  E I  I+G++ FY  +  
Sbjct: 24  AEWLFLDVFGWSKTDYLIHKDEQMSLTSINKLDKALDRMITGEPIQYIVGFQSFYGYQYK 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+GA+ + L    P    + 
Sbjct: 84  VNQHCLIPRPETEEVMLHFLEL------CKKTDTIADIGTGSGAIAITLKLLQPELNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL +AK NA      +    L+ +    +   +   D ++SNPPYI    +  +
Sbjct: 138 TDLYEDALNVAKQNASHYH--QNIQFLRGNALKPLIENDIKLDGLISNPPYIGHSEIIDM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V +++P  +L    +G + Y +I + +   + + G    EIGY+Q   + R+ +   
Sbjct: 196 ESRVLNYEPHHALFAEKNGFAIYESILEDLPFVMKQGGHVVFEIGYSQGDILKRMIQDLY 255

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  FKD  GN R++
Sbjct: 256 PEKEVEIFKDINGNQRII 273


>gi|118619168|ref|YP_907500.1| modification methylase HemK [Mycobacterium ulcerans Agy99]
 gi|118571278|gb|ABL06029.1| modification methylase HemK [Mycobacterium ulcerans Agy99]
          Length = 282

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      +TG     + + PD  LD        + +    +   +  ++G   F  
Sbjct: 23  ARGDAEWLAAHLTGTDRGLLYL-PDDPLDSDALGQYQDMVTARSRRVPLQHLIGTVQFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETE +++ A A  L      +   I+DL TG+GA+ +AL    P  
Sbjct: 82  VELQVGPGVFVPRPETEAVLEWAGAQQLS-----EDPVIVDLCTGSGALAVALANRWPTA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           + +GVD S  ALE A  N+V   V   R D         ++G  D++V+NPPYI    V 
Sbjct: 137 RILGVDDSAAALEYAHRNSVGTKVELVRADVTTPGLMPELDGQVDLVVTNPPYIPDGAV- 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP  +L GG +G++    +     R L   G  +VE         V+  ES
Sbjct: 196 -LEPEVAQHDPHRALFGGPNGMAVIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVKCIES 254

Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264
                 + A +D  G  R +   +
Sbjct: 255 AGVFEDIVARQDLAGRPRFVTAVK 278


>gi|284032944|ref|YP_003382875.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
 gi|283812237|gb|ADB34076.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
          Length = 277

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V G+S  Q+ +     +   Q+      + R  + E +  + G   F    L
Sbjct: 25  DAAELLAFVCGVSRLQLGL---VDVTTAQQTQYDVLVDRRAQREPLQHLTGTAAFRYREL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE+LV   L     R++  +   ++DL +G+GA+  A+  E P     
Sbjct: 82  VVGPGVFVPRPETEVLVGWMLD----RLKDVEAPLVVDLCSGSGAIAGAVATERPDSTVH 137

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            V++S +A   A+ N    G +     +       ++G  D +++NPPYI     + +  
Sbjct: 138 AVELSPEACGWARRNLEGTGATLHEGDIDG-CLPELDGQVDAVIANPPYIPLTAWESVTA 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRD DP ++L  G DGL   + +A    R L   G    E    Q      +F +  LF
Sbjct: 197 EVRDHDPALALWSGDDGLDEIKVVAATAGRLLKPGGWFGCEHADVQGESAPAVFAATGLF 256

Query: 246 -LVNAFKDYGGNDRVLLFCR 264
             V    D  G  R     R
Sbjct: 257 TEVRDQLDLAGRHRFATGRR 276


>gi|166366578|ref|YP_001658851.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166088951|dbj|BAG03659.1| N(5)-glutamine methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 294

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 120/269 (44%), Gaps = 13/269 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIV-----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++   FL  VT L +  + +          L             R      +  +L    
Sbjct: 29  KEVDIFLQAVTDLDTLSLRLQSFREREKIPLSYSWSEITKRWQKRLQSRVPLQYLLESVV 88

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N  L +S +   PRPETELL+D         +   D    +DLGTG+GA+ + L    
Sbjct: 89  WRNFTLKVSPEVLIPRPETELLIDIV----GETVRGDDGGIWVDLGTGSGAIAIGLASIL 144

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176
              +   +D S  AL IAK N +  G ++R    Q  W++ +E   G    ++SNPPYI 
Sbjct: 145 TKAEIYAIDYSQTALAIAKENIINTGFADRIILKQGSWWTPLEKWQGQISGMLSNPPYIP 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +  L +EVR+ +PR++LDGG DGL+  R +      +L   GL  VE+   Q   V 
Sbjct: 205 SAEILDLQIEVREHEPRLALDGGEDGLTALRYLVATAPDYLRSGGLWLVEMRAGQGEKVA 264

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           ++ E++     +    D  G DR +L  R
Sbjct: 265 QMLENQGNYRQIQIINDLAGFDRFVLAER 293


>gi|330752434|emb|CBL87384.1| modification methylase HemK [uncultured Flavobacteria bacterium]
          Length = 273

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 126/248 (50%), Gaps = 9/248 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           GL  H+++++ D  +      +  N + R  KHE I  +L    F+ ++  ++SD   PR
Sbjct: 27  GLKPHELVLNYDKKVSSYDCDYFDNVLKRLKKHEPIQYVLEVAYFFGLKFFVNSDVLIPR 86

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE L    L + L  I++   ++ILD+GTG+  + +AL K+ P  K   +D+S  AL+
Sbjct: 87  PETEEL----LVWILKSIDRNKALKILDIGTGSACIAVALAKQFPNAKIYAMDVSADALK 142

Query: 136 IAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +AK+NA  N V    + +++D F    +   FDVIVSNPPY+       +   V DF+P 
Sbjct: 143 VAKTNAKNNKV--NINFIEADIFRTKDLTSSFDVIVSNPPYVRQSEATEMASNVLDFEPA 200

Query: 194 ISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           ++L       L  Y  I   + ++L+  G C +EI      ++  +F+ +        KD
Sbjct: 201 LALFVNDNQPLMFYNAILKILLKNLSSGGFCFLEINEAFGSEIQALFDLKNFQNQQLKKD 260

Query: 253 YGGNDRVL 260
             G DR+ 
Sbjct: 261 TFGKDRMF 268


>gi|242371608|ref|ZP_04817182.1| HemK family methyltransferase [Staphylococcus epidermidis
           M23864:W1]
 gi|242350675|gb|EES42276.1| HemK family methyltransferase [Staphylococcus epidermidis
           M23864:W1]
          Length = 278

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V   S    ++    ++          A+ R LK E I  I+G++ FY  +  
Sbjct: 25  AKWLFLDVFQWSRTDYLIHSQELMSQADISKFDLALHRMLKGEPIQYIVGFQSFYGYKFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + ++   PRPET    +  +   L     +D   ++D+GTG+GA+ + L    P      
Sbjct: 85  VDANCLIPRPET----EEVMLHFLKLCRNKDG--VVDIGTGSGAIAVTLKLLRPDLDVYA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            D+    L +A++NA T+   +    LQ +    +       D ++SNPPYI+      +
Sbjct: 139 TDLYEDTLNVARNNADTH--QQDIHFLQGNALKPLIEKGIKVDGLISNPPYIDEAESKDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V  F+P  +L     G + Y  I   + + +N++G    EIGYNQ   +  I  +  
Sbjct: 197 DDTVLQFEPHHALFAENKGYAIYEDILKDLPQVMNENGHVVFEIGYNQGEKLKSIVTTMY 256

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   +D  G+ R++
Sbjct: 257 PNKEVEVIRDINGHQRIV 274


>gi|257084461|ref|ZP_05578822.1| modification methylase HemK [Enterococcus faecalis Fly1]
 gi|256992491|gb|EEU79793.1| modification methylase HemK [Enterococcus faecalis Fly1]
          Length = 277

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMSQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +  Q +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYQGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|163793918|ref|ZP_02187892.1| Methylase of polypeptide chain release factor [alpha
           proteobacterium BAL199]
 gi|159181029|gb|EDP65546.1| Methylase of polypeptide chain release factor [alpha
           proteobacterium BAL199]
          Length = 294

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L         ++       +   Q     + + R L  E + RILG R F+ 
Sbjct: 23  ARIDARLLLGEAMQ---REIWPHESGPVTPAQLACFEDLLARRLTREPVSRILGRRAFWT 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +  DT +PRP+TE L+++A+A    R       RI+DLGTGTG + LA L   P  
Sbjct: 80  LDLIVGPDTLDPRPDTETLIEAAIAAFADR---EPPNRIIDLGTGTGCLLLAALSAFPAA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D S  A+EIA++NAV N +S R +    DW    +   D+I+SNPPYIE   +  
Sbjct: 137 TGLGIDKSKGAVEIARTNAVRNELSARAEFQTIDWDELPQDRGDLILSNPPYIEEATLSA 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  FDPR +L GG DGL  Y ++A  + R +   G+  +E+G  Q+  V  +    
Sbjct: 197 LAPEVVQFDPRDALSGGADGLEAYDSLAGVLPRLMAPQGIAILELGAGQRSAVETLMIGV 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
              +    KD G  +R L+ 
Sbjct: 257 GFAVQEVRKDLGNIERALVL 276


>gi|296273266|ref|YP_003655897.1| HemK family modification methylase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097440|gb|ADG93390.1| modification methylase, HemK family [Arcobacter nitrofigilis DSM
           7299]
          Length = 274

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 11/260 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             ++    +  +   +   + ++ +      +   L   + +   H  +  +     FY 
Sbjct: 21  PAKEVEILIMFLLEKNVIWMHLNGNFEFTKEEE--LKALVKKRATHFPLEYLTNRVSFYG 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +  +   PRPETE+LV+ A      ++++ +  +++++GTG+G + + L K  P  
Sbjct: 79  ETFIIKQNVLIPRPETEILVEKAFE----KLKQIENPKVVEIGTGSGIISVMLSKLLPQL 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   VDI+  ALE+AK NA  + V  +   ++SD    V G FD+ +SNPPYI +  V  
Sbjct: 135 KVTAVDINDDALELAKENAKKHSVENQISFIKSDLLKEVSGDFDMCISNPPYISNNYV-- 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   V+ ++P+ +L GG  G    + +   V+           E GY+QK  +    +  
Sbjct: 193 LPHNVK-YEPKNALFGGEIGDELLKDLIKEVTE--KNIKYLYCEYGYDQKESIKNYMKKF 249

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +  +  +KDY   DR  L 
Sbjct: 250 NVKSLEFYKDYSDFDRGFLI 269


>gi|317968709|ref|ZP_07970099.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Synechococcus sp. CB0205]
          Length = 300

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 80/248 (32%), Positives = 123/248 (49%), Gaps = 6/248 (2%)

Query: 22  VIVDPDSVLDDRQ-RFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + + P+S ++  Q    L     + L +   +  ++G   + ++ L ++     PR ETE
Sbjct: 45  LRLYPESKIELEQDLGTLEQIWNQHLEQAIPLQYLVGRCPWRDIELEVAPGVLIPRQETE 104

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +LVD AL  +    +     R  DLGTG+G + +AL K  P  +G  VD S +AL  A+ 
Sbjct: 105 VLVDLALDCAKGD-QLGSAPRWADLGTGSGCIAIALAKGLPNGQGCAVDRSAEALRQAER 163

Query: 140 NAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           NA     S   D  + DW+ ++    G  D++VSNPPYI + +   L   VR+ +P ++L
Sbjct: 164 NAKAILGSACLDFREGDWWDAIRDQWGQLDLVVSNPPYIPAAVWAQLEPVVREHEPELAL 223

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           +GG DGL   RTIA G +  L   G   +E  Y+Q   V+ + E+  L  V A KD  G 
Sbjct: 224 NGGSDGLEALRTIAAGAALGLTPGGWLLLEHHYDQSRAVLELLEAAGLVNVQAHKDLEGI 283

Query: 257 DRVLLFCR 264
            R     R
Sbjct: 284 QRFAKAQR 291


>gi|218441827|ref|YP_002380156.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cyanothece sp. PCC 7424]
 gi|218174555|gb|ACK73288.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cyanothece sp. PCC 7424]
          Length = 299

 Score =  230 bits (587), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 116/263 (44%), Gaps = 9/263 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRF----FLTNAIVRSLK-HESIHRILGWRDFYNV 63
             L  V  L+   + ++                LT    + L     +  ++G   +   
Sbjct: 34  WLLQEVANLTPLDLRLNLFQERSQISLKYSLSQLTELWQQRLNERLPVQYLVGVTPWRKF 93

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL +S D   PRPETE ++D      L           +DLGTG+GA+ L L        
Sbjct: 94  RLKVSHDVLIPRPETEYIIDIVQKAILDTPLDLSGGNWVDLGTGSGAIALGLADLLTNAT 153

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
              VD S  ALEIA+ NA+  G+ +R    Q  W+  +E   G  + +VSNPPYI + I+
Sbjct: 154 IYAVDTSLAALEIAEENAIELGLKQRIIFKQGSWWDPLEFLKGQINGMVSNPPYIPTEII 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV   +P ++LDGG DGL     + +    +L   G+  +E+   Q   VV++ E
Sbjct: 214 PTLQPEVAYHEPTLALDGGEDGLMSIDYLVEISPFYLRSGGIWLIEMMAGQGKKVVQLLE 273

Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262
           ++     +  F D  G DR +L 
Sbjct: 274 NQGSYQNIQIFPDLAGIDRFVLA 296


>gi|297180645|gb|ADI16855.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0010_13E22]
          Length = 296

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 141/262 (53%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              DS   L    GL    +  +  +  D+         + R L  E + RI GWR+F+ 
Sbjct: 27  PALDSRLLLGTALGLDRAVLPHETLAGFDEAAAAMFEAFLNRRLGGEPVSRIRGWREFWT 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL L+  T +PRP++E +V +ALA + P        R+LDLG GTGA+ LA L E P  
Sbjct: 87  LRLELAPATLDPRPDSETIVAAALAATDP----GKPCRMLDLGCGTGALLLACLSERPDA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIV 180
            G GVDI+ +A+E A  NA  NG+S R D +  D+       G++D+I+ NPPYI +  +
Sbjct: 143 TGTGVDIAGEAVEAATRNAGKNGLSARADFVIGDFSDPDVAPGIYDLILCNPPYIPAGEI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L +EV  FDPR++LDGG DGL  +R +   ++  L++ G   +EIG  Q+  V+ +  
Sbjct: 203 DGLAVEVACFDPRLALDGGDDGLDCWRAVLPRIAAGLSRGGRACLEIGAGQRDAVLGLAA 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
              L  +   KD+ G  R L+ 
Sbjct: 263 RAGLCEIGREKDFAGICRCLVL 284


>gi|315168547|gb|EFU12564.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1341]
          Length = 277

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|227519761|ref|ZP_03949810.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX0104]
 gi|227072849|gb|EEI10812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX0104]
          Length = 277

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVTSEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|54023022|ref|YP_117264.1| putative methyltransferase [Nocardia farcinica IFM 10152]
 gi|54014530|dbj|BAD55900.1| putative methyltransferase [Nocardia farcinica IFM 10152]
          Length = 290

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 13/267 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++ + P  + +          I R  +   +  + G      + L
Sbjct: 28  DAECLAAHLLGVERGRLALVP--LAEPEVVERYRELIDRRAERVPLQHLTGVAAMGEIDL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL   ALA  L  +       ++DL TG+GA+ LA+    P  +  
Sbjct: 86  AVGPGVFVPRPETELLFAWALAH-LETLPHDHQPIVIDLCTGSGALALAIAHARPDAQVH 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERF-------DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V++   AL  A+ NA                D       + + G  D++V+NPPYI   
Sbjct: 145 AVELDPAALRWARRNADERIADGDTPITLHADDVTDPSLLTDLNGRVDLVVANPPYIPEG 204

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V  L  EV D DP ++L GG DGL   R +   ++R L   G   +E   +    +  +
Sbjct: 205 AV--LDPEVVDHDPHLALFGGADGLDVIRGMVPTIARLLRPGGATGIEHDDSNGGALAAL 262

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +      V    D  G  R ++  R
Sbjct: 263 LTAHGEFSEVVEHPDLAGKPRFVVAVR 289


>gi|126642198|ref|YP_001085182.1| methyl transferase [Acinetobacter baumannii ATCC 17978]
          Length = 206

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 74/209 (35%), Positives = 106/209 (50%), Gaps = 10/209 (4%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            G + F+ + L ++SDT  PRP+TE+L+++ L  +LP+        I+DLGTGTGA+ LA
Sbjct: 2   TGSQPFWTLDLKVTSDTLVPRPDTEVLIETVLNLNLPK-----NANIVDLGTGTGAIALA 56

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPP 173
           L  E P +     DI    L++AK NA T+G+          WF ++E   FD+IVSNPP
Sbjct: 57  LASERPNWFVTATDIYAPTLDVAKENAQTHGL-HHVKFACGAWFEALEPQQFDLIVSNPP 115

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI+         +    +PR +L     GL+    I       L   G  ++E GY+Q  
Sbjct: 116 YIDPEDEHM---QALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQ 172

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            V  IF       +   +DYG NDRV L 
Sbjct: 173 AVRGIFAEHGFSEIKTIQDYGQNDRVTLA 201


>gi|257421857|ref|ZP_05598847.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
 gi|257163681|gb|EEU93641.1| protoporphyrinogen oxidase hemK [Enterococcus faecalis X98]
 gi|315155438|gb|EFT99454.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0043]
          Length = 277

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVTSEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q V +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGVALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|126695681|ref|YP_001090567.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9301]
 gi|126542724|gb|ABO16966.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9301]
          Length = 289

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 6/221 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           LK   I  + G   + +++L +++    PR ETEL+VD        + EK   +   +LG
Sbjct: 70  LKSCPIQYLCGITFWRDLKLKVTNKVLIPRAETELIVDIVFNIFQKKSEK---LFFAELG 126

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162
           TG+GA+ +AL    P  + V  DI   ALEIA  N + +           +W+S +E   
Sbjct: 127 TGSGAISIALALAYPLSEVVATDIDQDALEIATKNFINSSKQSNLKFYCGNWWSPLECFK 186

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D+ +SNPPYI     + L  EV++F+P+++L GG DGL H+R I       L  +G 
Sbjct: 187 GKIDLAISNPPYIPRDTYEKLPKEVKNFEPKVALLGGEDGLEHFREIIQKAPLFLKDNGW 246

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             +E  ++Q   V ++    K   +   KD  G  R  +  
Sbjct: 247 LILENHFDQSEKVKQLLIKNKFTSIEIVKDLSGIGRFTIGR 287


>gi|329118657|ref|ZP_08247361.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465392|gb|EGF11673.1| protein methyltransferase HemK [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 271

 Score =  229 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 85/266 (31%), Positives = 116/266 (43%), Gaps = 13/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++    C  TG +  Q+I      L       L+    R L  E    ILG R+FY 
Sbjct: 13  PKNEARLLACAATGWTPAQLITRSREPLPPDTAAALSALENRRLAGEPAAYILGEREFYG 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R T+S     PRPETE LV++ALA            R+ DLGTG+GA+ + L  E P  
Sbjct: 73  RRFTVSPAVLIPRPETEHLVEAALARL------SAGGRVWDLGTGSGAIAVTLACERPDA 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
                DIS  AL +A                   WF+++       FD+IVSNPPYIE  
Sbjct: 127 HVSASDISPAALALAAQ--NAAAHRAAVRFACGSWFAALPPSEAADFDLIVSNPPYIEVD 184

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                  ++R F+P+ +L    DGL+  RT+A G +  L   G   VE G NQ      I
Sbjct: 185 DPHLHQGDLR-FEPQHALTDFSDGLTCIRTLAHGAAHRLRGGGYLIVEHGCNQGAAARSI 243

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F +     ++   D  G DR+ L  +
Sbjct: 244 FAAAGWQNISTLPDLAGLDRITLGQK 269


>gi|172038587|ref|YP_001805088.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142]
 gi|171700041|gb|ACB53022.1| protoporphyrinogen oxidase [Cyanothece sp. ATCC 51142]
          Length = 303

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 75/234 (32%), Positives = 109/234 (46%), Gaps = 6/234 (2%)

Query: 37  FLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIE 94
            LT      +K    +  ++G   +    L +S D   PRPETEL++D AL A    R  
Sbjct: 69  ELTQLWQCRVKQRVPLQYLVGETPWRRFSLKVSPDVLIPRPETELIIDFALKAVQHSRNP 128

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                  +DLGTG+GA+ L L    P      VD S +AL IA+ NA+  G S +    Q
Sbjct: 129 YLSSGHWVDLGTGSGAIALGLADSFPQATIHAVDTSIQALTIAQENAIKEGFSSQIHFYQ 188

Query: 155 SDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             W++ +E   G    +VSNPPYI + ++  L  EV+  +P ++LDGG DGL     + D
Sbjct: 189 GSWWTPLEHLQGQVSAMVSNPPYIPTSLLSQLEPEVKKHEPILALDGGNDGLEAINYLID 248

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLFLVNAFKDYGGNDRVLLFCR 264
               +L   G+  VE+   Q   V ++ E+      +    D  G  R  L  R
Sbjct: 249 TAPNYLISGGIFLVEMMAGQGEKVKQLLEASYHYQAIEILPDLAGVGRFALAYR 302


>gi|156548304|ref|XP_001602562.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Nasonia vitripennis]
          Length = 334

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 78/275 (28%), Positives = 116/275 (42%), Gaps = 24/275 (8%)

Query: 8   HSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              +C V G      +I   + VLD  Q   L       L    +  I+G  DF  + LT
Sbjct: 53  EHIVCHVIGSKKITDLINHHERVLDKEQLEKLELLCECRLSRMPVQYIIGEWDFRELTLT 112

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    F PRPETE+LVD  L        K     IL++G G+GA+ L++L  S     V 
Sbjct: 113 LEPPIFIPRPETEILVDFLLTRISDSANKNKN--ILEIGCGSGAISLSVLHSSQNANIVA 170

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------------------VEGLFDVI 168
           +D++ +A E+   NA    +  R   L +                        +  FD I
Sbjct: 171 IDVNPRACELTIRNAKNLDLDMRLTVLNAAIQKDGKIEVKKAYGTNKEEVDFSKRKFDFI 230

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI +  V  L  E++ ++   +LDGG DGL     I    S  LN  G   +E+ 
Sbjct: 231 VSNPPYIPTKSVFELQPEIKLYEDIRALDGGDDGLKWIEPILKYASEALNVGGYLILEVD 290

Query: 229 YNQKVDVVRIFE---SRKLFLVNAFKDYGGNDRVL 260
            +    +  + E   + +L   +  KDY   +R++
Sbjct: 291 SSHPERIKFLVEKYYANQLKFKHIHKDYCNKERIV 325


>gi|167754863|ref|ZP_02426990.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402]
 gi|237735405|ref|ZP_04565886.1| modification methylase [Mollicutes bacterium D7]
 gi|167704913|gb|EDS19492.1| hypothetical protein CLORAM_00367 [Clostridium ramosum DSM 1402]
 gi|229381150|gb|EEO31241.1| modification methylase [Coprobacillus sp. D7]
          Length = 285

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 8/262 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      +     H++ +  D  +           +    + + I  I G  +F+     
Sbjct: 25  AKVLFYHLADKQPHELYLMYDEEVSSELEAKFLAGMEEYYQGKPIQYIKGVENFFGRDFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PR ETE LV++ L        +   + + D+GTG+GA+  +L  E P  K   
Sbjct: 85  VNEDVLIPRYETEELVENILYRIDDYFAEYQSITLCDVGTGSGAIATSLALEEPRLKVFA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS KA+ +AK NA   G     + +  D    +   E   D+ VSNPPYI       +
Sbjct: 145 TDISLKAVTVAKDNAKNLGA--NIEFMVGDMLEPLLENEIKVDIFVSNPPYIPQE--QEI 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V+D +P ++L GG DGL  YR I  GV   L +  L + E+G++Q+  +    +   
Sbjct: 201 EAMVKDNEPHVALFGGNDGLYFYRKIFQGVEPLLQERALLAFEMGFDQRELMEAALQEYF 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
                   KD  G DR+L   R
Sbjct: 261 PNDPHEIIKDINGKDRMLFIYR 282


>gi|323466866|gb|ADX70553.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus helveticus H10]
          Length = 280

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L     L+  +  +  D VL D Q       I +  K  S   ILG+  F   ++
Sbjct: 23  DIDYVLAERLNLTPSEFELKQDMVLSDDQLKQANKDIKKLAKGVSPQYILGYAWFLGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV+  L         +   ++LDLGTG+G + +AL KE+      
Sbjct: 83  MVQRGVLIPRFETEELVEWTLKSL------KSGDKVLDLGTGSGCITVALAKEAEKKGIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++   
Sbjct: 137 DLTLYASDITDAALRTSEENFLTYDLD--VVTRKANVLIGLE-KFDKIISNPPYIKTTEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 194 KEMDENVLQNEPKEALFAGNDGLDFYKKFAKQVRDHLNSHGEFFLEFGFSEEDQLKELFA 253

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +    F +   KD  G  R++   
Sbjct: 254 KELPDFDIEFRKDVAGKPRMVHGR 277


>gi|332296061|ref|YP_004437984.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermodesulfobium narugense DSM 14796]
 gi|332179164|gb|AEE14853.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermodesulfobium narugense DSM 14796]
          Length = 290

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 131/265 (49%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               +S   L     +    + +  +  +D  +   +  AI   LK++ +  I+G++ F 
Sbjct: 30  NPFLESKIILSHFLEIDIKDLYLFDNIEIDMDKINSIYEAIELRLKNKPLEYIIGYKPFR 89

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L ++ D   PR ETE ++D  +    PR +       LD+GTG+GA+ L+L++E   
Sbjct: 90  LLKLKVNEDVLIPRNETEEIID-IIKKFFPRAK-----TFLDIGTGSGAIALSLVREIEN 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE--SVI 179
              V  DIS +AL +AK NA  N +  +     +D F   + +FDVIVSNPPYI+  +  
Sbjct: 144 SFCVATDISERALMVAKENAKENNLENKVSFELADLFPLEKKMFDVIVSNPPYIDISNTK 203

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  +  E+  F+P+I+L     GL  Y  I       L  DG    E+G+NQ  +VV I 
Sbjct: 204 LSLISKEIY-FEPKIALFAENKGLYFYEKILSKAKDFLLFDGGLVFEVGFNQAKEVVEIG 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           E+       + KD  G +R ++ CR
Sbjct: 263 EANNFSCF-SLKDLYGVERFVV-CR 285


>gi|282900758|ref|ZP_06308700.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505]
 gi|281194558|gb|EFA69513.1| Modification methylase HemK [Cylindrospermopsis raciborskii CS-505]
          Length = 297

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 16/269 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDP-------DSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           R+    L  +  +    + ++          VL   +   L     R  +   I  + G 
Sbjct: 30  REVDWLLQEIARVDKLTLRLESFKDYQEITMVLSLTELDSLWQ--KRLQQRVPIQYLAGR 87

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             +    L +S     PRPETE+L+D  +  +   ++       +DLGTG+GA+ L L +
Sbjct: 88  TPWRKFTLAVSDAVLIPRPETEILIDLVMEAANQDLQSG---IWVDLGTGSGAIALGLAE 144

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
                K   +DIS +AL +A++NA   G ++R +  Q  W+  +   +G    +VSNPPY
Sbjct: 145 VLTNAKIYAIDISEQALAVARTNARNLGFTQRVEFHQGCWWEPLNHLQGKISGMVSNPPY 204

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I S ++  L  EV + +P ++LDGG+DGL   R + +    +L   G+  +E+   Q   
Sbjct: 205 IPSDMIGTLEPEVVEHEPHLALDGGVDGLEAIRYLVEVSPHYLLPGGVWLIEMMAGQDEA 264

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLF 262
           V  +  +      ++   D  G  R  L 
Sbjct: 265 VREMLINNGNYSHISIHTDLAGIKRFALA 293


>gi|315304794|ref|ZP_07874956.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria ivanovii FSL F6-596]
 gi|313626834|gb|EFR95805.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria ivanovii FSL F6-596]
          Length = 236

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 10/230 (4%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           +        R L  E +  IL    FY     ++ D   PRPETE LV    A +   + 
Sbjct: 6   KKQFQEDFERYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELV----ACAEAFLN 61

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K  +  +LD+ TG+G + +AL K  P       DIS  AL IAK NA+      RF  ++
Sbjct: 62  KNPLPAVLDVCTGSGIIAIALKKAFPNIAMTAADISGPALAIAKKNALLLNADVRF--VE 119

Query: 155 SDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +D   + +     FD+I++NPPYI     + +   V   +P ++L    DG + Y     
Sbjct: 120 TDLLEAFKQHGEHFDMILANPPYISEAEKETMSDYVLKNEPALALFAENDGFAIYERFVA 179

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260
            +   LN      VEIGY Q   V ++F+ S     V   KD    DR +
Sbjct: 180 DLKFVLNPSFWVGVEIGYTQGEKVKQLFQKSYPHSAVVIHKDINSKDRYV 229


>gi|295113545|emb|CBL32182.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus sp. 7L76]
 gi|315161811|gb|EFU05828.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0645]
          Length = 277

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRMYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|167721409|ref|ZP_02404645.1| protein methyltransferase HemK [Burkholderia pseudomallei DM98]
          Length = 247

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 76/244 (31%), Positives = 119/244 (48%), Gaps = 11/244 (4%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
           Q+I   D  LD   R        R    E I ++ G R+F+ +   ++ D   PRPETEL
Sbjct: 1   QLITRADEPLDAAARARYLALQARRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETEL 60

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           LV++AL      I+      +LDLGTG+GA+ +++  E P  +   ++ S  AL++A+ N
Sbjct: 61  LVETALD----AIDGIASPCVLDLGTGSGAIAVSIASERPDARVWALERSVAALDVARRN 116

Query: 141 AVTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           A       R       L+SDW+++++    F V+VSNPPYI          ++R F+PR 
Sbjct: 117 ARKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRG 175

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L    DGL+  RTI  G    +   G   +E GY+Q   V  + ++     V +  D  
Sbjct: 176 ALTDENDGLAAIRTIVAGAHAFVAPGGALWLEHGYDQAAAVRALLDAAGFADVESRADLA 235

Query: 255 GNDR 258
             +R
Sbjct: 236 SIER 239


>gi|220904892|ref|YP_002480204.1| modification methylase, HemK family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869191|gb|ACL49526.1| modification methylase, HemK family [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 305

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 73/277 (26%), Positives = 113/277 (40%), Gaps = 19/277 (6%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   + +V  L     ++     L   +   L   + R    E +  I G ++FY     
Sbjct: 26  AQVLVEKVLQLDRLGCVMYAGRQLSAHEIQTLNTLLARRAAGEPLAHITGSKEFYGRDFA 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRD----------------VVRILDLGTGTGA 110
           ++  T  PRPETELLVD A+  +   I+  D                     DLG G+G 
Sbjct: 86  VTPHTLIPRPETELLVDKAIEAARKIIDAADRQGLRHAKTEGTPAGCGPCFADLGCGSGC 145

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + + L  E P ++GV VDIS +A++ A+ NA + G   R   L  D        G + ++
Sbjct: 146 IGITLALELPHWQGVLVDISPEAVQTARHNAASLGAQNRVWCLPGDMTRPPLARGAYTML 205

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI       +  EV + +P  +L     GL+H        +  L   G+  +E G
Sbjct: 206 VSNPPYIAESERSMVMGEVLEHEPHSALFSPRQGLAHLAAAIQAAAWALVPGGVLLLEHG 265

Query: 229 YNQKVDVVRIFESRKLFLV-NAFKDYGGNDRVLLFCR 264
             Q     R+     LF      +D  G +R  +  R
Sbjct: 266 AAQGAATRRLLREHDLFEAPVTHRDMAGLERCTVAFR 302


>gi|256763196|ref|ZP_05503776.1| modification methylase HemK [Enterococcus faecalis T3]
 gi|256853869|ref|ZP_05559234.1| hemK protein [Enterococcus faecalis T8]
 gi|307290430|ref|ZP_07570345.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0411]
 gi|256684447|gb|EEU24142.1| modification methylase HemK [Enterococcus faecalis T3]
 gi|256710812|gb|EEU25855.1| hemK protein [Enterococcus faecalis T8]
 gi|306498623|gb|EFM68125.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0411]
 gi|315030388|gb|EFT42320.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4000]
 gi|315150060|gb|EFT94076.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0012]
          Length = 277

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|332558341|ref|ZP_08412663.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodobacter sphaeroides WS8N]
 gi|332276053|gb|EGJ21368.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodobacter sphaeroides WS8N]
          Length = 278

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 131/259 (50%), Gaps = 8/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   L     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLLAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+D+ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIDAALA--------EPFATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   GV+ R +   SDWF++V    D+I+SNPPYI +  + 
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGVAPRLELRLSDWFAAVPERVDLILSNPPYIAADEMA 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 ALAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVL 260
             L  V+   D  G DR++
Sbjct: 253 AGLARVSVLPDLDGRDRLV 271


>gi|307719605|ref|YP_003875137.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM
           6192]
 gi|306533330|gb|ADN02864.1| hypothetical protein STHERM_c19290 [Spirochaeta thermophila DSM
           6192]
          Length = 282

 Score =  229 bits (585), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 6/261 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L + +GLS   ++      +         + + R L  E +  I G ++FY + 
Sbjct: 25  LDALLILSQASGLSKEALLASYPEPVPPETGRTFESLLARRLAGEPVSYIRGLKEFYGLT 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FK 123
             +      PRP+TE+LVD+AL           +  I D  TGTG + +A+L  +P    
Sbjct: 85  FHVDRRVLVPRPDTEVLVDAALTLIR---RDPAITHIHDACTGTGCILIAILAHTPRPLT 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D+S +AL++ + NA     +      +SD  SSV G F +I +NPPY+    V  +
Sbjct: 142 ASASDVSEEALDVFRENASRLLGTVPPH-HRSDLLSSVPGRFHLITANPPYLTEEEVAVM 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                  +P ++L  G DGLSH R +      HL   G    E    Q   V  ++    
Sbjct: 201 KAS-GWPEPALALASGPDGLSHIRRLIPQALDHLVPGGYLICEHHDAQADAVAELYREAG 259

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V    D  G  R  L  +
Sbjct: 260 YTHVRHLPDLAGRRRATLARK 280


>gi|288574778|ref|ZP_06393135.1| modification methylase, HemK family [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570519|gb|EFC92076.1| modification methylase, HemK family [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 282

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 117/267 (43%), Gaps = 12/267 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D    L    G+S   +    +   +      +  A+ R    E +H ILG   F+
Sbjct: 23  NPDLDVDLILSHFMGVSRSWIHCHGEFPFEGATLDLMKEAVFRRKGREPLHYILGSCPFW 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              L++ S T  PRPETE LV+ AL +        D    +D GTG+G +  A+L + P 
Sbjct: 83  GKTLSVRSGTLIPRPETEFLVEVALNYF-------DGGTFVDWGTGSGCITCAILSDRPD 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
              + VD    A+E+A  N    G   R          S+    G  D+IVSNPPYI S 
Sbjct: 136 ASCIAVDSEASAIEVAYGNLRREGFLNRCLLWHGSTPESIPVASGTVDLIVSNPPYIPSE 195

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVR 237
            V  L  EV  ++PR +LDGG DGL  YR +     R L   GL  VE  G +Q   +  
Sbjct: 196 DVPSLMPEVARYEPRSALDGGRDGLDPYRMLLPWAKRTLRPGGLLWVEFGGADQVRPLEE 255

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  S  + L+    D  G  R++ + R
Sbjct: 256 MAPS-GMSLLEVRNDLSGIPRLMGWRR 281


>gi|295692624|ref|YP_003601234.1| protoporphyrinogen oxidase [Lactobacillus crispatus ST1]
 gi|295030730|emb|CBL50209.1| Protoporphyrinogen oxidase [Lactobacillus crispatus ST1]
          Length = 281

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    GL+  +  +  +  L   Q       I +  K  S   ILG+  F   ++
Sbjct: 24  DVDYVLAERLGLTPSEFELKQEMDLTADQIKQANKDIEKLAKGISPQYILGYAWFLGYKI 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----- 120
            +      PR ETE LV+ AL         +   ++LDLGTG+G + +AL KE+      
Sbjct: 84  MVQRGVLIPRFETEELVEWALQTL------KSGDQVLDLGTGSGCITVALAKEAQKKGIT 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D++  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++   
Sbjct: 138 DLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE-FDKIISNPPYIKTSEK 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
           + +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 195 NAMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEFFLEFGFSEEEQLKELFA 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +    F +   KD  G  R++   
Sbjct: 255 KELPDFEIEFRKDMAGKPRMVHGR 278


>gi|268609960|ref|ZP_06143687.1| methyltransferase [Ruminococcus flavefaciens FD-1]
          Length = 282

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 9/242 (3%)

Query: 21  QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80
             +  P   +       +     R      +  +LG  +FY     LS D   PRP+TE 
Sbjct: 38  YPLFRPAEEVSGEDEKTIRQLTERRSSGYPLQYLLGEWEFYGYPFRLSEDVLIPRPDTET 97

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+++ L     R +     +I DL +G+G + + L KE P  +   V++S  AL+I K N
Sbjct: 98  LIENVLEIC--RRKGMRSPKIADLCSGSGCIAITLKKELPLAEVSAVELSGGALDIIKEN 155

Query: 141 AVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N    R   ++ D      + +    D+IVSNPPY+ +  +  L  EVR ++P ++L
Sbjct: 156 ASLNDADIRI--IKGDVLKKETADMFRDMDIIVSNPPYVTAKEMAELQQEVR-YEPEMAL 212

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            GG DGL  YRT+       L   G    E G  Q+ DV +I        +   +D  G 
Sbjct: 213 YGGEDGLDFYRTMTALWKYSLADGGWLLYEYGDGQQNDVEKILNDNDFDNITLSRDLAGI 272

Query: 257 DR 258
            R
Sbjct: 273 FR 274


>gi|330444668|ref|YP_004377654.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58]
 gi|328807778|gb|AEB41951.1| protoporphyrinogen oxidase [Chlamydophila pecorum E58]
          Length = 288

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 6/260 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           + R++ S L  + GLSS+  + D   V +     +     +R  K        G   F  
Sbjct: 31  SEREAASILMDLLGLSSYSQLSDVPYVSEKIIEAYQKRLKLRGEKRCPTAYFHGSVSFLG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + S    PR ETELL +  + +        ++  + D+  G+G + LA+    P  
Sbjct: 91  LSLNIDSRVLIPRMETELLAERVITYISSH---PEIQVVYDVCCGSGCIGLAIKNACPQV 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  DIS KA+ +AK NA    +    +    D F       D  V NPPY+    V  
Sbjct: 148 QVVLSDISPKAVAVAKENARNTRLD--VEVYLGDLFEPYSSPGDAFVCNPPYLSYKEVIR 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              EV   +P  +L GG  G+  Y+ IA  + + L   G+  +EIGY Q   V  IF  +
Sbjct: 206 TDPEVHCHEPWQALVGGATGVEFYKRIAQELPKVLKPRGVGWLEIGYTQGSQVKDIFLRQ 265

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +      +D+ G DR    
Sbjct: 266 GISG-EIQQDFAGWDRFFFL 284


>gi|257087540|ref|ZP_05581901.1| modification methylase HemK [Enterococcus faecalis D6]
 gi|256995570|gb|EEU82872.1| modification methylase HemK [Enterococcus faecalis D6]
 gi|315025303|gb|EFT37235.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2137]
          Length = 277

 Score =  229 bits (584), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +  +      +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAVYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|255020677|ref|ZP_05292739.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756]
 gi|254969913|gb|EET27413.1| protoporphyrinogen oxidase [Acidithiobacillus caldus ATCC 51756]
          Length = 290

 Score =  228 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 115/260 (44%), Gaps = 11/260 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  ++   L  V G  +  ++   D  L       L   + R L  E +   LG   F 
Sbjct: 27  QARAEARWLLEAVLGWDAATLLRRADEALPAAAAVALDALLSRRLSGEPLAYCLGTAPFL 86

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +S     PR +TE+LV +AL     R+      ++LDLGTG+GA+ LAL +  P 
Sbjct: 87  DFELAVSPAVLIPRADTEVLVQAALE----RMPLYGRQKVLDLGTGSGAIALALARSRPT 142

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVI 179
            +  GVD+S  AL +A++NA   G+    D  Q  W  ++     FD+IVSNPPY+ +  
Sbjct: 143 AEITGVDLSSDALALARANAKALGLV--VDWQQGHWCRALAPGQRFDLIVSNPPYLAADD 200

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                      +P ++L  G  G   +  I + V   LN       E G++Q   +    
Sbjct: 201 PHLAE---LQHEPALALVAGPTGYEAFTEILEAVRDRLNPGAWLLFEHGWDQGPALRERL 257

Query: 240 ESRKLFLVNAFKDYGGNDRV 259
            +     V   +D  G +RV
Sbjct: 258 TASGFRAVFGQRDGAGRERV 277


>gi|311694730|gb|ADP97603.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine bacterium HP15]
          Length = 300

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 116/259 (44%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++   + R   L      +  D+ L   +R  +   I R + +   +  +LG   F  + 
Sbjct: 39  EAVQLVMRSLHLPLENNTLFLDARLTREERELVLERIARRVDERVPLAYLLGEAWFMGMP 98

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L+++      P +  + V RILDL TG+G + +         + 
Sbjct: 99  FHVDERVLVPRSPIGELIENGFQ---PWLGDKPVERILDLCTGSGCIGIGAASVFGEAEV 155

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A+SN   +GV ER  T+QSD F ++EG +DVIVSNPPY+++  +  + 
Sbjct: 156 DLSDISPDALEVAESNIDLHGVRERVRTVQSDVFDNIEGRYDVIVSNPPYVDADDLSSMP 215

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E R  +P + L  G DGL     I    + HL   GL  VE+G +  V +   +    L
Sbjct: 216 DEYR-HEPELGLAAGKDGLDIAHRIIAKAAEHLTPGGLLVVEVGNSW-VAMDEAYPDLPL 273

Query: 245 FLVNAFKDYGGNDRVLLFC 263
             +       G D V L  
Sbjct: 274 TWLEFE---NGGDGVFLIT 289


>gi|294501880|ref|YP_003565580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium QM B1551]
 gi|294351817|gb|ADE72146.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium QM B1551]
          Length = 283

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 111/269 (41%), Gaps = 12/269 (4%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD       L     ++   ++      L++         +        +  ++G  
Sbjct: 16  EAKRDENAGELLLRHHLQMTRTHLLGSLQEELEEEILKRFEQDVHAHKAGMPVQYLIGTE 75

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +FY     ++     PRPETE LV   ++      + + +  + D+GTG+GA+ + L  E
Sbjct: 76  EFYGRSFIVNEHVLIPRPETEELVYGMISRIKKEFQHQPIELV-DIGTGSGAIAITLALE 134

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
               +    DI+ ++L +AK NA     +     +Q D           FDVIVSNPPYI
Sbjct: 135 LDRVEVTATDIAIESLSVAKENAQNLDAA--VTFIQGDLLQPFLLSNQKFDVIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +   D L   V+D +P  +L GG DGL  YR   + +      + +   E+G  Q  DV
Sbjct: 193 PAD--DELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIGFEVGAGQTKDV 250

Query: 236 VRIFESR-KLFLVNAFKDYGGNDRVLLFC 263
             + +       V    D  G DR++   
Sbjct: 251 AEMLQKTFPTAFVECVYDINGKDRMVFAQ 279


>gi|239617253|ref|YP_002940575.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1]
 gi|239506084|gb|ACR79571.1| modification methylase, HemK family [Kosmotoga olearia TBF 19.5.1]
          Length = 282

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  +  +  H+V VD  + +D +    L +A+ R    E +  I+GW+ F   +L L S
Sbjct: 29  LLESIAMIEKHKVFVDTATEIDTKTCKLLFDAVKRLKAGEPLDYIIGWKYFLGAKLNLDS 88

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PRPETE LV+  +       + ++V    D+GTG+GA+ +AL K  P  K    DI
Sbjct: 89  RVLIPRPETEELVEMIINEH----KGKNVKAFADVGTGSGAIAIALAKHFPASKIYATDI 144

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCLGLE 186
           S  ALE+A  NA  NGV  R   L     + +E   D   +IVSNPPY+++ +++ L   
Sbjct: 145 SKPALELAFENAKINGVEGRIAFLHGKNLNPLEAYMDEIEIIVSNPPYVKTTVLESLDKR 204

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLF 245
           V+D++P I+LDGG DG++ +R       + L +     +EI    +  +    +  RK +
Sbjct: 205 VKDYEPIIALDGGEDGMNFFREFI----KVLPEGKFVYLEIATYSRNPLKDFLKKYRKRY 260

Query: 246 LVNAFKDYGGNDRVLLFC 263
            V   +D  G  R  +  
Sbjct: 261 TVKFRRDLSGKIRFAILR 278


>gi|315172489|gb|EFU16506.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1346]
          Length = 277

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +  +      +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLRAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|227877272|ref|ZP_03995345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256842835|ref|ZP_05548323.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 125-2-CHN]
 gi|256848801|ref|ZP_05554235.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US]
 gi|262045801|ref|ZP_06018765.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus MV-3A-US]
 gi|293381670|ref|ZP_06627651.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 214-1]
 gi|312977645|ref|ZP_07789392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus CTV-05]
 gi|227863128|gb|EEJ70574.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus crispatus JV-V01]
 gi|256614255|gb|EEU19456.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 125-2-CHN]
 gi|256714340|gb|EEU29327.1| protoporphyrinogen oxidase [Lactobacillus crispatus MV-1A-US]
 gi|260573760|gb|EEX30316.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus MV-3A-US]
 gi|290921717|gb|EFD98738.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus 214-1]
 gi|310895384|gb|EFQ44451.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus crispatus CTV-05]
          Length = 281

 Score =  228 bits (583), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    GL+  +  +  +  L   Q       I +  K  S   ILG+  F   ++
Sbjct: 24  DVDYVLAERLGLTPSEFELKQEMDLTADQIKQANKDIEKLAKGISPQYILGYAWFLGYKI 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----- 120
            +      PR ETE LV+ AL         +   ++LDLGTG+G + +AL KE+      
Sbjct: 84  MVQRGVLIPRFETEELVEWALQTL------KSGDQVLDLGTGSGCITVALAKEAQKKGIT 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D++  AL  ++ N +T  +     T +++    +E  FD I+SNPPYI++   
Sbjct: 138 DLTLYASDVTDTALRTSEENFLTYDLD--VTTRKANVLLGLEE-FDKIISNPPYIKTSEK 194

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
           + +   V   +P+ +L  G DGL  Y+  A  V  HLN  G   +E G++++  +  +F 
Sbjct: 195 NVMDENVLQNEPKEALFAGKDGLDFYKKFAKQVREHLNSHGEFFLEFGFSEEEQLKELFA 254

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
           +    F +   KD  G  R++   
Sbjct: 255 KELPDFEIEFRKDMAGKPRMVHGR 278


>gi|262201849|ref|YP_003273057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gordonia bronchialis DSM 43247]
 gi|262085196|gb|ACY21164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gordonia bronchialis DSM 43247]
          Length = 314

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 14/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   +  V G+   ++++     ++  +R     A+ R      +  I G   F  
Sbjct: 35  ADTEARRLMAHVLGVDVGRLLLV--DHVEPARRAEFEAAVDRRAAGVPLQHITGRVGFGT 92

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETEL+V+ AL   LP  ++R  +RI+DL +G+GA+ LA+    P  
Sbjct: 93  VELAVGPGVFIPRPETELIVEWALRR-LPSPQRRAPLRIVDLCSGSGALALAIAHRLPAA 151

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDV-----IVSNPPYI 175
           + V V++   AL   + N    G + R    ++D     ++  LFD      +VSNPPY+
Sbjct: 152 EVVAVEVDDAALTWLRRNVERLGPAGRVHVHRADVTDHDAMSALFDDASVDLVVSNPPYV 211

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +     +G EV   DP +++ GG DG+     +  G++R L   G  ++E        V
Sbjct: 212 PTT--ATVGAEVA-HDPDLAVYGGPDGMQVITPMIAGIARVLAPGGSVAIEHDDTTAGLV 268

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           V+          + + +D  G  R +   R
Sbjct: 269 VQELRDAGVFADIESHRDLAGRPRFVTAVR 298


>gi|224477105|ref|YP_002634711.1| hypothetical protein Sca_1620 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421712|emb|CAL28526.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 274

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 114/266 (42%), Gaps = 13/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +  R +   L  +   S    ++  +  + D +     +A+ R L  E I  I G++ F 
Sbjct: 14  EPKR-AEWLLMDLFDWSFTDYVMKREEKVSDDELKRFNDAVDRMLSGEPIQYITGFQTFL 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             + T+      PRPET    +  L   + R ++ DV  + D+GTG+G + + L +  P 
Sbjct: 73  GEKFTVDYRCLIPRPET----EEVLMHFIERCQQGDV--VADIGTGSGIIAVMLKQLRPD 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESV 178
            K    D+    L+IA+ NA  +        L+ +    +       D ++SNPPYI+  
Sbjct: 127 LKVYATDLYDGPLQIAQQNADAHHTE--ITFLKGNALEPLVENNIRLDGLISNPPYIDFA 184

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +   V D++P  +L     GL+ Y  I + +   +    +   EIG+ Q   + R+
Sbjct: 185 DASEMTETVLDYEPHQALFAENHGLAIYAAIIEQLPFVMQNGAIVVFEIGFEQGPTLKRM 244

Query: 239 FESR-KLFLVNAFKDYGGNDRVLLFC 263
            E +     V    D  GNDR++ F 
Sbjct: 245 IEEKYPHIEVEVIADINGNDRIVSFQ 270


>gi|261416347|ref|YP_003250030.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fibrobacter succinogenes subsp. succinogenes S85]
 gi|261372803|gb|ACX75548.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fibrobacter succinogenes subsp. succinogenes S85]
          Length = 326

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 111/300 (37%), Gaps = 45/300 (15%)

Query: 2   QALRDSHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
            A  D+   +     + +   + ++ +  L   +   L   + R    E +  I+G   F
Sbjct: 26  DARLDAEYIISYGLKMKNRMDLYLNFEKPLTPAELDVLRTMVARRATREPLQHIIGDTSF 85

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               +        PRPETE LVD A       ++  +   I+++GTGTGA+ +A  KE  
Sbjct: 86  RGFIIKCDRRALIPRPETESLVDMASD----SLKGIEKPFIVEIGTGTGAISIACAKEIA 141

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER---------------------------FDTL 153
             K +  D+S  AL +A++NA  N ++                                 
Sbjct: 142 GAKVLATDVSEDALALARTNAEANDLAGNPDAESAASSTGSTASASSASSANEASSLTFA 201

Query: 154 QSDWFSSV------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           Q D  +++                D +++N PYI     D L  EV  +DP ++L GG D
Sbjct: 202 QGDLLNAITADVIANVAGDSSAKIDCLIANLPYIPDSEKDKLQPEVAKYDPALALFGGED 261

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN-AFKDYGGNDRVL 260
           GL   R +       L       +EIG  Q   +    E       +   KD+  N R +
Sbjct: 262 GLDLVRKLLQQTEGKLKPGASILLEIGSEQGEMLKAEAEKYPWLEFSGIHKDFCNNVRFV 321


>gi|237719658|ref|ZP_04550139.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450927|gb|EEO56718.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 232

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 74/239 (30%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L + ++  L N I R  K+E I  I G  +F      ++S    PRPET  LV+  +   
Sbjct: 2   LSECKQRELENIIFRLQKNEPIQYIRGIAEFCGRNFKVASSVLIPRPETAELVELIVE-- 59

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
               E  +  R+LD+GTG+G + ++L K+ P  +    DIS +AL IA+ N     +  R
Sbjct: 60  ----ENPNARRLLDIGTGSGCIAISLDKKLPDAEVEAWDISEEALAIARKNNDA--LEAR 113

Query: 150 FDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSH 205
              LQ D  +        FDVIVSNPPY+     + +   V D++P ++L     D L  
Sbjct: 114 VRFLQRDVLADDWEKIPSFDVIVSNPPYVTETEKNEMDANVLDWEPGLALFVPDEDPLRF 173

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           Y  IA   S  L   G    EI      +   I E  +   V   +D  G DR++   R
Sbjct: 174 YNRIARLGSELLLPGGKLYFEINQAYGRETAHILEMNQYRDVRVIRDIFGKDRIVTANR 232


>gi|302333763|gb|ADL23956.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 278

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ IA++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNIARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  +D  G+DR++ F
Sbjct: 257 PDKKIDIIQDINGHDRIVSF 276


>gi|257081919|ref|ZP_05576280.1| modification methylase HemK [Enterococcus faecalis E1Sol]
 gi|256989949|gb|EEU77251.1| modification methylase HemK [Enterococcus faecalis E1Sol]
          Length = 277

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAKVLGAD--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|256961204|ref|ZP_05565375.1| modification methylase HemK [Enterococcus faecalis Merz96]
 gi|293384153|ref|ZP_06630047.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           R712]
 gi|293386967|ref|ZP_06631536.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           S613]
 gi|312907896|ref|ZP_07766879.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|312978575|ref|ZP_07790313.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis DAPTO 516]
 gi|256951700|gb|EEU68332.1| modification methylase HemK [Enterococcus faecalis Merz96]
 gi|291078633|gb|EFE15997.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           R712]
 gi|291083637|gb|EFE20600.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           S613]
 gi|310625987|gb|EFQ09270.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|311288724|gb|EFQ67280.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis DAPTO 516]
          Length = 277

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQVLGAD--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|46202828|ref|ZP_00208676.1| COG2890: Methylase of polypeptide chain release factors
           [Magnetospirillum magnetotacticum MS-1]
          Length = 313

 Score =  228 bits (582), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 6/236 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+         L+   + +     + +     L  A  R L  E + RILG  +F+
Sbjct: 29  NARADARFLALHALALTPLDLTLRGREPIGEAGAHRLGRAAERRLAGEPVARILGAWEFW 88

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +  +L  +T  PRP+TE +V++AL       E+   +R++DLGTG+G + +ALL E   
Sbjct: 89  GLPFSLGPETLVPRPDTESVVETALRLF---PERDRPLRLVDLGTGSGCILVALLHERLR 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D +  AL +A++NA  NGV  R   L+  W  ++ G FD+IVSNPPYI + ++ 
Sbjct: 146 AFGLGLDRAEGALRVARANAERNGVGARAAFLRGSWLDALVGPFDLIVSNPPYIAAPVIA 205

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGV---SRHLNKDGLCSVEIGYNQKVD 234
            L  EVR+ DP  +LDGG DGL  YR I  G+      L+  G   +EIGY+Q   
Sbjct: 206 TLDTEVREHDPMAALDGGPDGLDAYRAILLGIARRPDLLSPGGALVLEIGYDQAAA 261


>gi|257416747|ref|ZP_05593741.1| modification methylase HemK [Enterococcus faecalis AR01/DG]
 gi|257158575|gb|EEU88535.1| modification methylase HemK [Enterococcus faecalis ARO1/DG]
          Length = 277

 Score =  228 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGATLQELLNAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|325125450|gb|ADY84780.1| Protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 280

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFKG 124
               PR ETE LV+ ALA        +D   +LDLGTG+G + +AL KE+          
Sbjct: 87  GVLIPRFETEELVEWALAHL------QDGDTVLDLGTGSGNITVALAKEAESKGIKDLHF 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 141 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F E   
Sbjct: 198 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMFAEKLP 257

Query: 244 LFLVNAFKDYGGNDRVLLF 262
            F V   +D  G  R+L  
Sbjct: 258 DFKVEFRRDMAGKPRMLFG 276


>gi|300812482|ref|ZP_07092908.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|313123398|ref|YP_004033657.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|300496543|gb|EFK31639.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|312279961|gb|ADQ60680.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 280

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFKG 124
               PR ETE LV+ ALA        +D   +LDLGTG+G + +AL KE+          
Sbjct: 87  GVLIPRFETEELVEWALAHL------QDGDTVLDLGTGSGNITVALAKEAESKGIKDLHF 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 141 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F E   
Sbjct: 198 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALFAEKLP 257

Query: 244 LFLVNAFKDYGGNDRVLLF 262
            F V   +D  G  R+L  
Sbjct: 258 DFKVEFRRDMAGKPRMLFG 276


>gi|104773786|ref|YP_618766.1| methylase of polypeptide chain release factors [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
 gi|103422867|emb|CAI97529.1| Methylase of polypeptide chain release factors [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC 11842]
          Length = 273

 Score =  228 bits (581), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 20  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 79

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFKG 124
               PR ETE LV+ ALA        +D   +LDLGTG+G + +AL KE+          
Sbjct: 80  GVLIPRFETEELVEWALAHL------QDGDTVLDLGTGSGNITVALAKEAESKGIKDLHF 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F E   
Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMFAEKLP 250

Query: 244 LFLVNAFKDYGGNDRVLLF 262
            F V   +D  G  R+L  
Sbjct: 251 DFKVEFRRDMAGKPRMLFG 269


>gi|317052431|ref|YP_004113547.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurispirillum indicum S5]
 gi|316947515|gb|ADU66991.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfurispirillum indicum S5]
          Length = 293

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 64/235 (27%), Positives = 104/235 (44%), Gaps = 4/235 (1%)

Query: 7   SHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           + + L +V        + +  D      +     + + R    E +  I G ++F  +  
Sbjct: 35  AETLLAKVCDYQRRLDIYLHFDRPCTPEELQSFKHLLQRRTGGEPLAYITGEQNFLGLDF 94

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKG 124
            +      PR +TE +   A+A        +    ILDL  G+G + + +        + 
Sbjct: 95  QVGPGVLIPRFDTETIAMEAVARLRLPCAPQQPA-ILDLCCGSGVLGITVAHMAGKPCQL 153

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI   ALE A+ NA  +  +  +  L SD F ++ G FD+I+ NPPY++   +    
Sbjct: 154 TLADIDPAALEYAQRNASRHLGAGAWHVLPSDLFGAIRGTFDLILCNPPYLDQAHLSERE 213

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            EVR  +P  +LDGG DGL  YR +A G   HLN  G   +E GY+Q   +  +F
Sbjct: 214 DEVR-HEPLHALDGGRDGLDFYRALARGFRHHLNPGGRMLLEAGYDQHQSLASLF 267


>gi|295707228|ref|YP_003600303.1| protein-(glutamine-N5) methyltransferase [Bacillus megaterium DSM
           319]
 gi|294804887|gb|ADF41953.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bacillus megaterium DSM 319]
          Length = 283

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 114/269 (42%), Gaps = 12/269 (4%)

Query: 2   QALRD---SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A RD       L     ++   ++      L++         +        +  ++G  
Sbjct: 16  EAKRDENAGELLLRHHLQMTRTHLLGALQEELEEEILKRFEQDVHAHKAGMPVQYLIGTE 75

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +FY     ++     PRPETE LV   ++      + + +  + D+GTG+GA+ + L  E
Sbjct: 76  EFYGRSFIVNEHVLIPRPETEELVYGMISRIKKEFQHQPIELV-DIGTGSGAIAITLALE 134

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI 175
               +    DI+ ++L +AK NA     +  F   D LQ    S+    FDVIVSNPPYI
Sbjct: 135 LDRVEVTATDIAIESLSVAKENAQNLDAAVIFTQGDLLQPFLLSN--QKFDVIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +   D L   V+D +P  +L GG DGL  YR   + +      + +   E+G  Q  DV
Sbjct: 193 PAD--DELSTVVKDHEPNRALFGGKDGLDFYRRFMEELPYVTKSNSIIGFEVGAGQTKDV 250

Query: 236 VRIFESR-KLFLVNAFKDYGGNDRVLLFC 263
             + +       V    D  G DR++   
Sbjct: 251 AEMLQKTFPTAFVECVYDINGKDRMVFAQ 279


>gi|218247699|ref|YP_002373070.1| HemK family modification methylase [Cyanothece sp. PCC 8801]
 gi|218168177|gb|ACK66914.1| modification methylase, HemK family [Cyanothece sp. PCC 8801]
          Length = 300

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 10/268 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDP---DSVLDDR-QRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++    L  V  L +  + ++     S +  +     LT      LK    +  ++G   
Sbjct: 30  QEVDWLLQDVAQLDALSLRLESFKGRSPIPLKFSLSDLTQLWENRLKDRVPVQYLVGVTP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKE 118
           + N  L +S     PRPETEL++D A+            +   +DLGTG+GA+   L + 
Sbjct: 90  WRNFSLKVSPSVLIPRPETELIIDFAVKAVKDSPRNDLALGHWVDLGTGSGAIACGLAQA 149

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI 175
            P      VD S  AL IA+ NA   G S R +  Q  W++ +E   G    ++SNPPYI
Sbjct: 150 FPKAIIHAVDSSEAALAIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSNPPYI 209

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            + ++  L  EVRD +P ++LDGG DGL   R + +    +L   G+  VE+   Q   V
Sbjct: 210 PTKMLSALAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQGEKV 269

Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVLLF 262
            ++   S     +    D  G DR  L 
Sbjct: 270 AQLLTDSTAYKDIKILSDLAGIDRFALA 297


>gi|126336076|ref|XP_001378754.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Monodelphis domestica]
          Length = 358

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 74/285 (25%), Positives = 120/285 (42%), Gaps = 22/285 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDS--VLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           +A   S   +  V G  + Q +        + D Q+  +     R L+   +  ++G  D
Sbjct: 62  EARESSEYIVAHVLGAKTFQSLSASQRCAPITDLQQEQIGELCTRRLQRMPVQYVIGEWD 121

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-----------ILDLGTGT 108
           F  + L ++   F PRPETE LV+  L     R ++    R           ILD+  G+
Sbjct: 122 FQGLTLKMTPPVFIPRPETEELVNLVLHEQSQRCQEFRRKRTLAHQSHSWPLILDVCCGS 181

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVE 162
           GA+ L+LL +    + V VD   +A+++ + NA    + +R   ++ D  S         
Sbjct: 182 GAIALSLLSKLTQSRVVAVDKGEEAVQLTRENAQRLHLEDRIQIVRHDITSVNREQLLPW 241

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D +VSNPPYI    +  L  E+  ++   SLDGG +G+S  R I       L   G 
Sbjct: 242 GPVDFVVSNPPYIFHCDMAQLAPEILSYEDTDSLDGGENGMSVIREILSQAPMLLKDSGS 301

Query: 223 CSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVLLFCR 264
             +E+       V +  +S     L L+    D+ G  R L   +
Sbjct: 302 IFLEVDPRHPELVEKWLQSHPDLGLSLLATHVDFCGKPRFLHIHK 346


>gi|126462319|ref|YP_001043433.1| HemK family modification methylase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103983|gb|ABN76661.1| modification methylase, HemK family [Rhodobacter sphaeroides ATCC
           17029]
          Length = 278

 Score =  228 bits (581), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A RD+   +     +   ++ +     L          A+      + + +I+G R F+
Sbjct: 21  EAARDARRLMAHAMAIDPARLTLHLPDPLPPEAAARFEAALAARAARQPVGQIVGERLFW 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  ++ DT +PRPETE L+++ALA             +LDLGTGTG + + LL E P 
Sbjct: 81  GRRFRVTRDTLDPRPETEGLIEAALA--------EPFATVLDLGTGTGCIAVTLLAERPA 132

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+  D+S  AL +A  NA   G + R +   SDWF++V    D+I+SNPPYI +  +D
Sbjct: 133 AHGIATDLSPAALAVAAENAAALGAASRLELRLSDWFAAVPERVDLILSNPPYIAADEMD 192

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EVR ++P ++L  G DGL  YR IA G   HL   G   +EIG  Q   V  + E+
Sbjct: 193 TLAPEVRLWEPHLALSPGGDGLDAYRAIARGAPAHLRPGGRLLLEIGAAQGRAVAGLVEA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L  V+   D  G DR++   
Sbjct: 253 AGLARVSVLPDLDGRDRLVSAR 274


>gi|311113381|ref|YP_003984603.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC
           17931]
 gi|310944875|gb|ADP41169.1| protein-(glutamine-N5) methyltransferase [Rothia dentocariosa ATCC
           17931]
          Length = 313

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 27/274 (9%)

Query: 6   DSHSFLCRVTG---------------LSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKH 48
           D+      + G               ++   V         +  +     T  +    + 
Sbjct: 38  DAELLAAYLLGTGSQGIQRGSYGESSVTRADVQRFALMGRRITPQDSVRYTELLECRAQR 97

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +  I G   FY++ + +    F PRPETELLV+ AL   L   E     R++DL TG+
Sbjct: 98  VPLQHITGVAPFYHLEIKVGPGVFIPRPETELLVEEAL-RVLATYESNARPRVVDLCTGS 156

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLF 165
           GA+  A+ +E+P  +   V++S +AL  A+ N       +    +  D       + G F
Sbjct: 157 GAIAAAVKEENPQAEVFAVELSEQALLWARKNLD----PQNVHLIPGDIRTSLEDLPGYF 212

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCS 224
           D+++SNPPYI         LEV ++DP+++L  GG DG+   R +       L   G   
Sbjct: 213 DLVLSNPPYIPPHRKPQ-ALEVAEYDPQMALYGGGEDGMEIPREVIARAHYLLRPGGFFM 271

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           +E   +Q+  V     ++    + + +D  G  R
Sbjct: 272 MEHDDSQETRVTETLAAQGFVSIYSIRDLNGKPR 305


>gi|170781878|ref|YP_001710210.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156446|emb|CAQ01594.1| putative methylase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 291

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 111/268 (41%), Gaps = 10/268 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
               D+   +  V GLS  QV       + +D R    +     R  + E +  I G   
Sbjct: 29  DPAVDAELLVGHVLGLSRGQVQSRAITRAAVDARDAERVLELTARRARREPLQHITGVAH 88

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETE +   A+          D    +DLGTG+GA+ LAL  E 
Sbjct: 89  FRSLELLVGPGVFVPRPETEHVAQLAIDAL--SAAPGDAPVAVDLGTGSGALALALATEV 146

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +   +++S +A      N     ++ R D    D    F  ++G   V+VSNPPYI 
Sbjct: 147 PHARVHAIEVSPEAHAWTARNVER--LAPRVDLRLGDLADAFPELDGTVSVVVSNPPYIP 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              V     EVR  DP ++L GG DGL   R ++    R L+  G   +E G  Q   + 
Sbjct: 205 VDAVPR-DPEVRLHDPALALYGGADGLDVVRLVSTTARRLLHPGGALVIEHGELQGQAIR 263

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + ++         +D    DR     R
Sbjct: 264 ALLDADGWRATATHQDLTRRDRATTALR 291


>gi|307327907|ref|ZP_07607089.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces violaceusniger Tu 4113]
 gi|306886425|gb|EFN17429.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces violaceusniger Tu 4113]
          Length = 281

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V  +   ++   PD+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHSVKRGELHGVPDADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL  G+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCAGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++   AL  A+ N        R     +D  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELDEGALRWARKNVQ----GSRVVLHHADALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R +     R L   G+  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQLALFSGEDGLDVIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNNRPRFATARK 278


>gi|229545077|ref|ZP_04433802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX1322]
 gi|307287618|ref|ZP_07567661.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0109]
 gi|229309969|gb|EEN75956.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis TX1322]
 gi|306501356|gb|EFM70659.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0109]
 gi|315165015|gb|EFU09032.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1302]
          Length = 277

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTG + ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGVIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAKVLGAD--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWHLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|228474914|ref|ZP_04059643.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis SK119]
 gi|228271146|gb|EEK12526.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis SK119]
          Length = 278

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +   S    ++     +   +    + A+ R L  E I  I+G++ FY  +L 
Sbjct: 25  AEWLMLDLFEWSRTDYLMHMYDEMSQAEEAKFSLALDRMLLGEPIQYIVGFQSFYGYQLQ 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S    PRPETE ++   L         +D   I D+GTG+GA+ + L K +P    + 
Sbjct: 85  VNSHCLIPRPETEEVMLHFLEH------CKDGSTIADIGTGSGAIAIVLKKLNPTLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+    LE+A  NA  + +      L+ +    +       D ++SNPPYI+   +  +
Sbjct: 139 TDLIEDTLEVASDNA--HQLKADIRFLKGNALKPLIKENIKLDGLISNPPYIDQTEMKDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFESR 242
              V  ++P I+L    +G   Y  I D + + LNK    + EIGYNQ   +  RI    
Sbjct: 197 EDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVLNKGAYVTFEIGYNQGEILKARIINKY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               VN  KD  G +R++ F
Sbjct: 257 PHVNVNLLKDINGLNRMISF 276


>gi|288926890|ref|ZP_06420790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccae D17]
 gi|288336329|gb|EFC74710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccae D17]
          Length = 280

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 105/272 (38%), Gaps = 11/272 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L    GLS   V+    + L       L   + R    E +  +LG   F 
Sbjct: 9   EAQAIARMALDMRFGLSLTDVLCGKVNDLSAEDTRLLEEIVRRLETGEPVQYVLGEAPFC 68

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE+L+   L     +      V ILD+GTG+G + +    + P 
Sbjct: 69  GRNFHVEPGVLIPRPETEMLL--PLICKAAKASPSSPVTILDIGTGSGCIAITASLKLPE 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--------DWFSSVEGLFDVIVSNPP 173
            +    DIS KAL IA++NA   G    F+   +        D        +D+IVSNPP
Sbjct: 127 AQVTAWDISDKALHIAQNNAERLGARVTFEKQNALTAAEDYIDNTFPGSRQYDIIVSNPP 186

Query: 174 YIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           YI       +   V D++P ++L       L  Y+ I+    + L   G    EI     
Sbjct: 187 YIAERERKNMDPNVLDYEPTVALFVPDATPLLFYKAISHYAVKALKPSGCLLFEINPLFA 246

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            ++  + +      V    D  G  R++   R
Sbjct: 247 EELKEMLQEAGFNDVELMTDLFGKQRMVQARR 278


>gi|257090699|ref|ZP_05585060.1| modification methylase hemK [Enterococcus faecalis CH188]
 gi|312905240|ref|ZP_07764360.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0635]
 gi|256999511|gb|EEU86031.1| modification methylase hemK [Enterococcus faecalis CH188]
 gi|310631477|gb|EFQ14760.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0635]
 gi|315579265|gb|EFU91456.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0630]
          Length = 277

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|239637410|ref|ZP_04678392.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus warneri L37603]
 gi|239597010|gb|EEQ79525.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus warneri L37603]
          Length = 278

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      S    ++  +  +    +  L   + R L  E I  I+G++ FY  R T
Sbjct: 25  AEWLLLDTFNWSRTDYLIHMNDEMSVADKAKLGLNLQRMLSGEPIQYIVGFQSFYGYRFT 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETE ++   L          +   I D+GTG+G + + L K  P    + 
Sbjct: 85  VSDRCLIPRPETEEVMLHFLNL------CNEGDAIADIGTGSGVLGITLKKLKPTLSVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   ALE+A+ NA  +G  E  D +Q +    +       + ++SNPPYI+   V  +
Sbjct: 139 TDLYEDALEVARLNAEQHG--ENIDFIQGNALKPLIERNIKVNGLISNPPYIDVKEVKDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V D++P  +L     G + Y++I + + + L        EIGYNQ   +  I     
Sbjct: 197 AKTVVDYEPHQALFAKSQGYAIYQSILNDLPKVLLPGAHVVFEIGYNQGQTLKEIVNDMY 256

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V  +KD    DR+L
Sbjct: 257 PDKAVAIYKDINQLDRIL 274


>gi|73662076|ref|YP_300857.1| rRNA or tRNA methylase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494591|dbj|BAE17912.1| putative rRNA or tRNA methylase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 278

 Score =  227 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 13/266 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +++ R +   +  +   S    ++  D  +  + +    +A  R L  E I  ILG + F
Sbjct: 20  IESTR-AEWLMLDLFNWSKANYLMHMDDEVTLQHKNLFDDATQRMLNDEPIQYILGKQTF 78

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++     PRPET    +  +     ++   D   ++D+GTG+G + ++L K  P
Sbjct: 79  YGEVFKVNKHCLIPRPET----EEVMLHFYNQLHSGDC--VVDIGTGSGNIPISLKKLDP 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIES 177
             +    D+   AL +AK+NA  + V  RF  L  D    +       + ++SNPPYI+ 
Sbjct: 133 SLEVYATDLYTSALSVAKANAKMHQVEIRF--LLGDTLMPLIEHGIKVNGLISNPPYIDD 190

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                +   V +++P  +L    +G   Y  I D +   L  +     EIG+NQ   + +
Sbjct: 191 NDALIMDNTVLNYEPHTALFAKNNGYDIYDKIIDQLREVLLPNAKVVFEIGFNQGQTLKQ 250

Query: 238 -IFESRKLFLVNAFKDYGGNDRVLLF 262
            I E      V   KD   NDR++ F
Sbjct: 251 RIIEKYPSLDVQIIKDINNNDRIISF 276


>gi|283458331|ref|YP_003362952.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
 gi|283134367|dbj|BAI65132.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
          Length = 308

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/276 (26%), Positives = 103/276 (37%), Gaps = 19/276 (6%)

Query: 3   ALRDSHSFLCRVT---GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+      +      S  Q        L   Q       + R +  E +  I G   
Sbjct: 30  PRVDAELLASHLLYDGSRSRLQHAALMGERLTPDQVAEYEALVARRVCREPLQHITGSAP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-------RILDLGTGTGAVC 112
           FY + L +    F PRPETELLV+ AL     R +            RI+DL TG+GA+ 
Sbjct: 90  FYRLELAVGPGVFVPRPETELLVEEALKVLSTRADSAPRADSATGGLRIVDLCTGSGAIA 149

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIV 169
            A+  E P  +   V++S  A+   + N    G       +Q D     S + G FD ++
Sbjct: 150 AAVKSELPDAQVFAVELSEDAIPYTRRNLEPLG----VHLVQGDALTSLSELAGTFDAVL 205

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           SNPPYI    V     E    DP ++L  GG DG+     IA      L   GL  +E  
Sbjct: 206 SNPPYIPPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIAARAFELLTPGGLFIMEHD 264

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             Q+  V  +            +D     R  +  +
Sbjct: 265 DTQEEAVAELLARVGFEDCYPVRDLNNRPRHSVGYK 300


>gi|302542527|ref|ZP_07294869.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302460145|gb|EFL23238.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces himastatinicus ATCC 53653]
          Length = 281

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHGVSDADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL TG+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCTGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++   AL  A+ N        R    + D  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELDEGALLWARKNVE----GSRVVLQRGDALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R +     R L   G+  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQLALFSGEDGLDVIRGLERTAHRLLRPGGVVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNKRPRFATARK 278


>gi|313144534|ref|ZP_07806727.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818]
 gi|313129565|gb|EFR47182.1| protoporphyrinogen oxidase [Helicobacter cinaedi CCUG 18818]
          Length = 280

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 11/264 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   +S   L  V  +    +       ++  Q     + +    K + I  I     F
Sbjct: 27  LKPRFESELLLSFVLKVERIYLHTHSTQSVNPTQAKHFLSLVEERAKGKPIEYITQSASF 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++     PRPE+E+L+  A       I + ++  I ++G G+G + + L    P
Sbjct: 87  YEHTFYVNDSVLIPRPESEILIQKASEI----ITRHNIESIAEVGIGSGILSITLSLLHP 142

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    DIS KALE+ + N  +                S     ++I+SNPPYI     
Sbjct: 143 QCRFFATDISQKALEVTQKNIHSLAPDSNITLKHCSLLPSSWQDIELIISNPPYICDDYP 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L      ++P I+L GG DGL   + +        N+      EIGY+QK  + +I  
Sbjct: 203 ISLP---LTYEPSIALFGGKDGLDILKALIVEAK---NRKAFLLCEIGYDQKNALEQILT 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +  +KD  G DR   +CR
Sbjct: 257 QHNAKDIEFYKDLSGLDRGF-WCR 279


>gi|255326262|ref|ZP_05367348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia mucilaginosa ATCC 25296]
 gi|255296716|gb|EET76047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Rothia mucilaginosa ATCC 25296]
          Length = 302

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 104/270 (38%), Gaps = 13/270 (4%)

Query: 3   ALRDSHSFLCRVT---GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+      +      S  Q        L   Q       + R    E +  I G   
Sbjct: 30  PRVDAELLAAHLLYDGSRSRLQHAALMGERLTPEQVAEYEALVARRACREPLQHITGSAP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKE 118
           FY + L +    F PRPETELLV+ AL    PR       +RI+DL TG+GA+  A+  E
Sbjct: 90  FYRLELAVGPGVFVPRPETELLVEEALKVLAPRTNSATGQLRIVDLCTGSGAIAAAIKSE 149

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI 175
            P  +   V++S  A+   + N    G       +Q D  +++    G FD ++SNPPYI
Sbjct: 150 LPNAQVFAVELSEDAIPYTRKNLEPLG----VHLVQGDALTALPELAGTFDAVLSNPPYI 205

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
               V     E    DP ++L  GG DG+     IA      L   GL  +E    Q+  
Sbjct: 206 PPANVPA-DPEAALHDPDMALYGGGEDGMQMPSAIAARAFELLIPGGLFIMEHDDTQEDA 264

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V  +            +D     R  +  +
Sbjct: 265 VAELLARVGFEGCYPVRDLNNRPRHSVGYK 294


>gi|224438090|ref|ZP_03659029.1| DNA methylase HemK [Helicobacter cinaedi CCUG 18818]
          Length = 278

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 11/264 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   +S   L  V  +    +       ++  Q     + +    K + I  I     F
Sbjct: 25  LKPRFESELLLSFVLKVERIYLHTHSTQSVNPTQAKHFLSLVEERAKGKPIEYITQSASF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     ++     PRPE+E+L+  A       I + ++  I ++G G+G + + L    P
Sbjct: 85  YEHTFYVNDSVLIPRPESEILIQKASEI----ITRHNIESIAEVGIGSGILSITLSLLHP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    DIS KALE+ + N  +                S     ++I+SNPPYI     
Sbjct: 141 QCRFFATDISQKALEVTQKNIHSLAPDSNITLKHCSLLPSSWQDIELIISNPPYICDDYP 200

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L      ++P I+L GG DGL   + +        N+      EIGY+QK  + +I  
Sbjct: 201 ISLP---LTYEPSIALFGGKDGLDILKALIVEAK---NRKAFLLCEIGYDQKNALEQILT 254

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +  +KD  G DR   +CR
Sbjct: 255 QHNAKDIEFYKDLSGLDRGF-WCR 277


>gi|209522892|ref|ZP_03271449.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arthrospira maxima CS-328]
 gi|209496479|gb|EDZ96777.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arthrospira maxima CS-328]
          Length = 299

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/280 (27%), Positives = 115/280 (41%), Gaps = 23/280 (8%)

Query: 2   QALRDS----------HSFLCRVTGLSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSL 46
           QA  D+            FL  +T L+   + +D     P   L+      +     R  
Sbjct: 21  QAQNDAIAAEVSAIELDMFLEALTDLTRLDLRLDDFGDRPYIKLNQPWSAIVKLWERRIT 80

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +   +  +LG   + N  L +S     PRPETEL++D A   +            +D+GT
Sbjct: 81  ERVPLQYLLGVVHWRNFTLKVSPAVLIPRPETELIIDIAYHAA----PSAGSGNWVDMGT 136

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG 163
           G+GA+ L L    P      VD S  AL IA  NA + G   R    Q  W+    S++G
Sbjct: 137 GSGAIALGLASVFPEAMIHAVDCSWSALAIALENAQSLGYQNRVKFYQGSWWGPLHSLKG 196

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               +V+NPPYI S  +  L  EV  ++P ++LDGG  GL     +     + L   G+ 
Sbjct: 197 KVSGMVANPPYIPSQELPNLQPEVILYEPPLALDGGESGLDSIHHLVQTAPQFLQPGGIW 256

Query: 224 SVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLF 262
            +E+   Q   V  + ES      +    D  G DR  + 
Sbjct: 257 IIEMMAGQGEAVTSMLESAGCYRDLKILPDLAGIDRFAIA 296


>gi|183984068|ref|YP_001852359.1| modification methylase HemK [Mycobacterium marinum M]
 gi|183177394|gb|ACC42504.1| modification methylase HemK [Mycobacterium marinum M]
          Length = 282

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      +TG     + + P   LD        + +    +   +  ++G   F  
Sbjct: 23  ARGDAEWLAAHLTGTDRGLLYL-PGEPLDTDALGQYRDMVTARSRRVPLQHLIGTVQFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETE +++ A A  L      +   I+DL TG+GA+ +AL    P  
Sbjct: 82  VELQVGPGVFVPRPETEAVLEWAGAQQLS-----EYPVIVDLCTGSGALAIALADRWPAA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           + +GVD S  ALE A+ N+V   V   R D         ++G  D++V+NPPYI    V 
Sbjct: 137 RILGVDDSGAALEYAQRNSVGTKVELVRADVTTPGLMPELDGQVDLVVTNPPYIPDGAV- 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP  +L GG +G++    +     R L   G  +VE         V   ES
Sbjct: 196 -LEPEVAQHDPHRALFGGPNGMAVIPHVVRLAGRWLRPGGRFAVEHDDTTARQTVECIES 254

Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264
                 + A +D  G  R +   +
Sbjct: 255 EGVFEDIVARQDLAGRPRFVTAVK 278


>gi|325684405|gb|EGD26573.1| protoporphyrinogen oxidase [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 280

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 27  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 86

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFKG 124
               PR ETE LV+ AL         +D   +LDLGTG+G + +AL KE+          
Sbjct: 87  GVLIPRFETEELVEWALVHL------QDGDTVLDLGTGSGNITVALAKEAESKGIKDLHF 140

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 141 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 197

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F E   
Sbjct: 198 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKALFAEKLP 257

Query: 244 LFLVNAFKDYGGNDRVLLF 262
            F V   +D  G  R+L  
Sbjct: 258 DFKVEFRRDMAGKPRMLFG 276


>gi|256616930|ref|ZP_05473776.1| modification methylase HemK [Enterococcus faecalis ATCC 4200]
 gi|307276805|ref|ZP_07557916.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2134]
 gi|256596457|gb|EEU15633.1| modification methylase HemK [Enterococcus faecalis ATCC 4200]
 gi|306506442|gb|EFM75601.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX2134]
          Length = 277

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAVSLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   + ++   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQKLLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|29377041|ref|NP_816195.1| hemK protein [Enterococcus faecalis V583]
 gi|227554051|ref|ZP_03984098.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis HH22]
 gi|257419964|ref|ZP_05596958.1| modification methylase hemK [Enterococcus faecalis T11]
 gi|29344507|gb|AAO82265.1| hemK protein [Enterococcus faecalis V583]
 gi|227176799|gb|EEI57771.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis HH22]
 gi|257161792|gb|EEU91752.1| modification methylase hemK [Enterococcus faecalis T11]
 gi|315574711|gb|EFU86902.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0309B]
 gi|315580977|gb|EFU93168.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0309A]
          Length = 277

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S +AL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAVSLKLARPNWRVIAIDLSEEALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|225677173|ref|ZP_03788171.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590797|gb|EEH12026.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 279

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +  V G+    +I++    +   +         +  +   I +I+G R+F++  
Sbjct: 25  LDCEIIMQHVLGVERSFIIMNHADQVPMEKELLFWKLTKKRAERYPISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E L+ + L +      K+  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETLISTVLKY---YPNKKQRLKIADFGTGTGCLLISVLSEHEYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G + S +A ++A  N   + +  R     S W +   G FD+I+SNPPYI+   +  L 
Sbjct: 142 IGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +PRI+LDGGIDGL+ Y +I   + + L K+G   +EIG +Q  D+ +I  S KL
Sbjct: 201 AEVQK-EPRIALDGGIDGLNCYLSIFPILKKCLKKNGFAILEIGEDQ-NDIDKIIPSYKL 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R ++  +
Sbjct: 259 AFQEYVHDLAGMKRCIVMQK 278


>gi|256963677|ref|ZP_05567848.1| modification methylase HemK [Enterococcus faecalis HIP11704]
 gi|307271623|ref|ZP_07552894.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0855]
 gi|256954173|gb|EEU70805.1| modification methylase HemK [Enterococcus faecalis HIP11704]
 gi|306511501|gb|EFM80500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0855]
 gi|315170192|gb|EFU14209.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1342]
          Length = 277

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S KAL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEKALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   + ++   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQKLLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|329726153|gb|EGG62625.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU144]
          Length = 278

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 14/259 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V G S    ++  D  +       L  A+ R +  E I  I+G + FY  +  
Sbjct: 25  AEWLFLDVFGWSKTDYLIHKDEQMSLTSINKLDKALDRMVAGEPIQYIVGLQSFYGYQYK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE ++   L         +    I D+GTG+GA+ + L    P    + 
Sbjct: 85  VNQHCLIPRPETEEVMLHFLEL------CKKTDTIADIGTGSGAIAITLKLLQPELNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL +AK NA      +    L+ +    +   +   D ++SNPPYI    +  +
Sbjct: 139 TDLYEDALNVAKQNASHYH--QNIQFLRGNALKPLIENDIKLDGLISNPPYIGHSEIIDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-- 241
              V +++P  +L    +G + Y +I + +   + + G    EIGY+Q  D+++I     
Sbjct: 197 ESTVLNYEPHHALFAEKNGFAIYESILEDLPFVMKQGGYVVFEIGYSQG-DILKIMIQDL 255

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V  FKD  GN R +
Sbjct: 256 YPEKEVEIFKDINGNQRTI 274


>gi|314935934|ref|ZP_07843284.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis subsp. hominis C80]
 gi|313655940|gb|EFS19682.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus hominis subsp. hominis C80]
          Length = 278

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +   S    ++     +   +    + A+ R L  E I  I+G++ FY  +L 
Sbjct: 25  AEWLMLDLFEWSRTDYLMHMYDEMSQAEEAIFSLALDRMLLGEPIQYIVGFQSFYGYQLQ 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S    PRPETE ++   L         +D   I D+GTG+GA+ + L K +P    + 
Sbjct: 85  VNSHCLIPRPETEEVMLHFLEH------CKDGSTIADIGTGSGAIAIVLKKLNPTLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+    LE+A  NA  + +      L+ +    +       D ++SNPPYI+   +  +
Sbjct: 139 TDLIEDTLEVASDNA--HQLKADIRFLKGNALKPLIKENIKLDGLISNPPYIDQTEMKDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFESR 242
              V  ++P I+L    +G   Y  I D + + LNK    + EIGYNQ   +  RI    
Sbjct: 197 EDTVVKYEPHIALFAEDEGYEIYEMILDDLPKVLNKGAYVTFEIGYNQGEILKARIINKY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               VN  KD  G +R++ F
Sbjct: 257 PHVNVNLLKDINGLNRMISF 276


>gi|229823149|ref|ZP_04449218.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271]
 gi|229787315|gb|EEP23429.1| hypothetical protein GCWU000282_00446 [Catonella morbi ATCC 51271]
          Length = 287

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 112/249 (44%), Gaps = 4/249 (1%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           RV   +   ++     V +          + R + HE +  ILG+ DF   R  ++    
Sbjct: 36  RVFDWTLTDLVRQLHQVPNQEDYETFQEVLERLVTHEPLQYILGYEDFDGRRFKVTPAVL 95

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PR +T  ++D A ++        +  + LDLGTG+G + ++L    P  +    D+S +
Sbjct: 96  IPREDTAGILDLAASWLEKH---PNASQALDLGTGSGILAISLALRHPQLQLTAGDLSPE 152

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           AL IAK N  +   +  +           +  +D+++SNPPYI    +D +   V+ ++P
Sbjct: 153 ALAIAKENGKSLQATIDWLVTDICQGLPQDRTYDLVISNPPYISETELDLMDESVKRYEP 212

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFK 251
            ++L     GL+ YR +A  +  +L       +EIG+ Q   VV IF        V+  +
Sbjct: 213 SMALFAEQGGLAFYRQLAKQIGPYLKPIACLILEIGFRQGQAVVDIFRQAFPQAKVSCHQ 272

Query: 252 DYGGNDRVL 260
           D  G DR +
Sbjct: 273 DLNGRDRYV 281


>gi|167769700|ref|ZP_02441753.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM
           17241]
 gi|167668061|gb|EDS12191.1| hypothetical protein ANACOL_01034 [Anaerotruncus colihominis DSM
           17241]
          Length = 280

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 99/263 (37%), Gaps = 6/263 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D       + G    +   +     D  +         R    E +  +LG  +FY
Sbjct: 21  DAEFDLSCLFEHIFGAPR-RAPGNSAREADSAKLAAFNALAARYKAGEPLQYLLGMWEFY 79

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRP+TE LV++AL      ++      + DL  G+G +  A+    P 
Sbjct: 80  GLPFEVGPGVLIPRPDTETLVETALRL----LKGTAAPAVADLCAGSGCIAAAIAHARPD 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                V++S  A      N   N            +        D+IVSNPPYI    ++
Sbjct: 136 AHVYAVELSDAAFPYLVRNLARNAPGNAEAICGDAFAPPPLPPLDLIVSNPPYIARAEME 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +VR ++P ++L GG DGL  YR +       L   G  + E+GY Q   V  +   
Sbjct: 196 TLSPQVR-WEPEMALLGGEDGLDFYRALPRIWMPLLRPGGYIAFEVGYTQADTVAGLLGR 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                 +  +D  G  RV+   R
Sbjct: 255 SGYQSCSVERDLAGIRRVVWAQR 277


>gi|260910407|ref|ZP_05917079.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
           472 str. F0295]
 gi|260635483|gb|EEX53501.1| protein-(glutamine-N5) methyltransferase [Prevotella sp. oral taxon
           472 str. F0295]
          Length = 284

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 101/264 (38%), Gaps = 5/264 (1%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     GLS   V  D  + L       L   + + ++   +  +LG  +F 
Sbjct: 18  EAKAIVRMVLDVGFGLSLADVYADKVTQLSQDDARLLHKMMDKLVQGVPVQYVLGRAEFA 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE L    +     R        +LD+GTG+G +   L  + P 
Sbjct: 78  GRTFEVGQGVLIPRPETEELCTWIVQVCKDRATTGTSPTLLDIGTGSGCIATTLALDLPT 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           ++   +DIS KALEIA  NA       +F    +        L+DVIVSNPPYI      
Sbjct: 138 WRVSAIDISQKALEIATRNAQKLDAEVQFALQDALSMPPDTNLWDVIVSNPPYIMQCEAR 197

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V   +P  +L     + L  Y +IA      L   G    EI       + ++  
Sbjct: 198 QMQPNVLQNEPHSALFVPNEEPLLFYESIARYALHALKSGGKLFFEINPLCHDAMQKMLA 257

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +    D  G  R++   R
Sbjct: 258 DMGWQAIETRNDAFGKQRMMSATR 281


>gi|162447072|ref|YP_001620204.1| HemK family SAM-dependent methyltransferase [Acholeplasma laidlawii
           PG-8A]
 gi|161985179|gb|ABX80828.1| SAM-dependent methyltransferase, HemK family [Acholeplasma
           laidlawii PG-8A]
          Length = 283

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 8/255 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTL 67
             +  ++G S  +  +  +S + +     + +   R   +   +  I+G+  FY  +  +
Sbjct: 26  WLITELSGYSPTEFYLKMNSKVSEELINKIEDGFKRYAIEGTPVQHIVGYSYFYGYKFKV 85

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S     PR ETE LV+  L       E + V  +LDLGTG+GA+ + L  E P  +    
Sbjct: 86  SDQVLIPRRETEQLVEETLLIYDTYFEDQKVD-VLDLGTGSGAIAITLSIEEPNMQVEAS 144

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  AL +A+ N     +S + + + SDWFS++   +D+IV+NPPYI +   D    +V
Sbjct: 145 DISVTALMVAREN--QLNLSSKVNFIASDWFSNINKKYDIIVANPPYIPN---DEAVEDV 199

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFL 246
              +P ++L GG+DGL  Y  I      +L +  L + E    Q  ++   I +  K   
Sbjct: 200 VTKEPSLALYGGVDGLEPYEIILKNAKNYLKEKALIAFEHSMYQSENLKTLILKYFKDAK 259

Query: 247 VNAFKDYGGNDRVLL 261
           V   KD  G DR+  
Sbjct: 260 VRQLKDLQGKDRMTF 274


>gi|229549321|ref|ZP_04438046.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255972030|ref|ZP_05422616.1| modification methylase HemK [Enterococcus faecalis T1]
 gi|256957797|ref|ZP_05561968.1| modification methylase HemK [Enterococcus faecalis DS5]
 gi|257079735|ref|ZP_05574096.1| modification methylase HemK [Enterococcus faecalis JH1]
 gi|294779687|ref|ZP_06745077.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis PC1.1]
 gi|300861227|ref|ZP_07107314.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis TUSoD Ef11]
 gi|307270730|ref|ZP_07552021.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4248]
 gi|312953587|ref|ZP_07772424.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0102]
 gi|229305558|gb|EEN71554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterococcus faecalis ATCC 29200]
 gi|255963048|gb|EET95524.1| modification methylase HemK [Enterococcus faecalis T1]
 gi|256948293|gb|EEU64925.1| modification methylase HemK [Enterococcus faecalis DS5]
 gi|256987765|gb|EEU75067.1| modification methylase HemK [Enterococcus faecalis JH1]
 gi|294453241|gb|EFG21653.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis PC1.1]
 gi|300850266|gb|EFK78016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis TUSoD Ef11]
 gi|306513040|gb|EFM81681.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX4248]
 gi|310628425|gb|EFQ11708.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0102]
 gi|315035853|gb|EFT47785.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0027]
 gi|315151854|gb|EFT95870.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0031]
 gi|323481493|gb|ADX80932.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Enterococcus faecalis 62]
 gi|327535787|gb|AEA94621.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           OG1RF]
 gi|329578087|gb|EGG59500.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX1467]
          Length = 277

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S KAL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEKALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   + ++   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQKLLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|313157194|gb|EFR56624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alistipes sp. HGB5]
          Length = 280

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 16/264 (6%)

Query: 4   LRDSHSF----LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
            R++ S     +  ++GLS+  ++ DP + L   +   L + + +      +  ++G  +
Sbjct: 21  AREARSIALVAVSELSGLSASALLTDPGAPL---EIAELDDILGQLAAGRPVQYVVGRTE 77

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F      +      PRPETE L             K +   +LD+GTG+G +   L    
Sbjct: 78  FCGRTFAVHEGVLIPRPETEELAAWI------AQAKTEAATLLDVGTGSGCIAATLALAL 131

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           P  +    DIS  ALE A  N    G     R     SD      G FDVIVSNPPY+  
Sbjct: 132 PGAQVYAADISDTALETAARNCRALGAGVILRKADALSDLAEVFPGPFDVIVSNPPYVPQ 191

Query: 178 VIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             +  + + VR+++P  +L     D L  YR IA    R L   G    EI       + 
Sbjct: 192 SDLPAMHVNVREYEPHEALLVPDDDPLRFYRAIARAGRRTLRPGGRLYFEIYERFAEAMR 251

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           R+            +D  G  R+ 
Sbjct: 252 RMLGEEGYTDTEVREDLNGKPRMT 275


>gi|312899932|ref|ZP_07759250.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0470]
 gi|311292928|gb|EFQ71484.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0470]
          Length = 277

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPQEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S KAL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEKALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQEWYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   +  +   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQELLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|227537350|ref|ZP_03967399.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242853|gb|EEI92868.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 267

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/258 (28%), Positives = 114/258 (44%), Gaps = 8/258 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +  V G++  Q  V  D V+ + Q+  L   +   L+ + I  IL   DFY     ++  
Sbjct: 14  VEEVAGINRMQYTVQNDHVVTEEQKVQLDRILQELLRRKPIQHILKKADFYGEIFEVNEF 73

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV   +            ++I+D+GTG+G + + L K  P      +DIS
Sbjct: 74  VLIPRPETEELVHLIIGH---HRSSAVPLKIIDIGTGSGCIPVILKKHVPAAHVSALDIS 130

Query: 131 CKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            +A+ +AK N         F   D L+ ++  + E L+D+IVSNPPYI     + +   V
Sbjct: 131 KEAIAVAKRNTKKMETDIHFVNADILEWEYLFT-EQLYDIIVSNPPYITPKEKEEMHSNV 189

Query: 188 RDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            +F+P ++L       L  Y TIA     HL   G    EI      +   +   +    
Sbjct: 190 LEFEPHLALFVEESAPLLFYETIASFALVHLKPAGDLYFEINQYYGPETADMLRKKGFSK 249

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V   KD  G DR++   R
Sbjct: 250 VELIKDMHGADRMIHARR 267


>gi|332705342|ref|ZP_08425420.1| HemK family putative methylase [Lyngbya majuscula 3L]
 gi|332355702|gb|EGJ35164.1| HemK family putative methylase [Lyngbya majuscula 3L]
          Length = 315

 Score =  226 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 5/227 (2%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRI 101
            R  +   +  + G   + +  L +S     PRPETE L+D A+   ++           
Sbjct: 85  KRIHQRCPVQYLAGVTPWRHFSLRVSPAVLIPRPETESLIDLAVNGVAMSSTPDLSSGHW 144

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            DLGTG+GA+   L +  P      VD + +AL IA+ NA   G++E+       W+S +
Sbjct: 145 ADLGTGSGAIACGLAEVFPHGTIHAVDCTEEALAIAQLNAQQLGMAEKIKFYHGYWYSPL 204

Query: 162 E---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           E   G    +V+NPPYI S  +  L  E+   +P I+LDGG DGL   R + D    +L 
Sbjct: 205 EALKGQLSGMVANPPYIPSNSLKQLQPEIYYHEPHIALDGGRDGLDCIRQLIDMSGDYLR 264

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             G+  +E+   Q   VV++ ++      +  F D  G DR  L  R
Sbjct: 265 PGGVWLIEMMAGQADKVVQLLQNHGSYSEIQIFPDLAGIDRFALAYR 311


>gi|227535365|ref|ZP_03965414.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227186961|gb|EEI67028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 276

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+    ++ + +       + R  + E    I+G   F+     
Sbjct: 26  ARYVLMTRADFTPSQLILHRQDLMPETRWQQFQQDVERLRQFEPAQYIVGVAPFFGELFK 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+R     LDLGTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWVAE------EQRTAQTGLDLGTGSGAIGLTLARKLPQTTMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S +AL +AK NA    V+ +F    SD F+++   +D +V+N PYI       +   
Sbjct: 140 SDVSPEALAVAKQNAKEQQVAVQFTV--SDLFTALPARYDFVVTNLPYIAPEETPVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
              ++P+++L  G  GL+ +      + +HL   G   +E GY Q+  +  +F  +    
Sbjct: 198 TLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGGAAYLEFGYRQEPALRELFAKQLPQA 257

Query: 246 LVNAFKDYGGNDRV 259
            V   +D   + R+
Sbjct: 258 QVTFRRDMADHPRM 271


>gi|239631747|ref|ZP_04674778.1| methylase of polypeptide chain release factor [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526212|gb|EEQ65213.1| methylase of polypeptide chain release factor [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 286

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+    ++ + +       + R  + E    I+G   F+     
Sbjct: 36  ARYVLMTRADFTPSQLILHRQDLMPETRWQQFQQDVERLRQSEPAQYIVGVAPFFGELFK 95

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+R     LDLGTG+GA+ L L ++ P      
Sbjct: 96  VTPAVLIPRFETEELVAWVAE------EQRTAQTGLDLGTGSGAIGLTLARKLPQTTMTL 149

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S +AL +AK NA    V+ +F    SD F+++   +D +V+N PYI       +   
Sbjct: 150 SDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAALPARYDFVVTNLPYIAPEETPVMDQS 207

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
              ++P+++L  G  GL+ +      + +HL   G   +E GY Q+  +  +F  +    
Sbjct: 208 TLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGGAAYLEFGYRQEPALRELFAKQLPQA 267

Query: 246 LVNAFKDYGGNDRV 259
            V   +D   + R+
Sbjct: 268 QVTFRRDMADHPRM 281


>gi|307297958|ref|ZP_07577762.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916044|gb|EFN46427.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 277

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 14/253 (5%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V  L+   +I+D +  ++ +       A+ R ++ E I  +LG+R+F+ +RL ++     
Sbjct: 33  VLSLNEADLILDGEKEIESKLSAKYMKAVERVVEGEPIDYVLGFREFFGIRLEVTRSVLI 92

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR ETE LV+  +       E+++     D+GTG+GA+  AL +  P       DIS  A
Sbjct: 93  PRNETEELVEIVID------EEKNSKVFADIGTGSGAIACALARNIPSSLVFATDISRDA 146

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV---IVSNPPYIESVIVDCLGLEVRDF 190
           L +A+ NA TNG+      ++ D  S +    D    IVSNPPY+ +  +D L + VR +
Sbjct: 147 LMLAEKNARTNGIF-NIRFIEGDNISGLNDFLDSVEVIVSNPPYVRTGDLDSLDINVRKY 205

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P ++LDGG DGL  YR       ++L       +EI   +   +  +      +     
Sbjct: 206 EPMVALDGGKDGLDFYREFL----KYLPTGKKVYLEISQYEAEGLRELVSDLNGYSCEFK 261

Query: 251 KDYGGNDRVLLFC 263
           KD  GN R ++  
Sbjct: 262 KDLSGNYRFMILR 274


>gi|224541462|ref|ZP_03682001.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525620|gb|EEF94725.1| hypothetical protein CATMIT_00631 [Catenibacterium mitsuokai DSM
           15897]
          Length = 277

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 15/259 (5%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                 +TG + +Q+++  +  +++       + + R LK E    I+G   FY     +
Sbjct: 23  ERLYEDLTGDAYYQLLLKREEPVEEALLMQYKDYLNRYLKGEPYQYIIGKEYFYGREFDV 82

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +     PR ETE LV+  L++  P       + + D+GTG+GA+ + L  ES       V
Sbjct: 83  NPSVLIPRYETEELVEKVLSYIKP------GMVVADIGTGSGAIAVTLACES-KADLYAV 135

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DIS +A++ A  NA  +  S     L+ D    +       D++VSNPPYI+   V  L 
Sbjct: 136 DISKEAIDTASKNAKKHEAS--VTFLEGDLLQPLIDQNIRVDILVSNPPYIDYDEV--LD 191

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V D +P ++L     G + Y  I       L +  + + EIGYNQ   + ++      
Sbjct: 192 PRVIDHEPHLALFADDHGYACYEKIFKEAPSVLKEKAILAFEIGYNQGERMKQLVPLYFP 251

Query: 244 LFLVNAFKDYGGNDRVLLF 262
                  KD  G DR+L  
Sbjct: 252 NDTFEVIKDMNGKDRMLFI 270


>gi|308177037|ref|YP_003916443.1| methylase of peptide chain release factors [Arthrobacter
           arilaitensis Re117]
 gi|307744500|emb|CBT75472.1| putative methylase of peptide chain release factors [Arthrobacter
           arilaitensis Re117]
          Length = 285

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 106/258 (41%), Gaps = 7/258 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+   LC V G+S  ++ +        D   R   T  +        +  + G   F  +
Sbjct: 26  DADLLLCHVLGISRSELKLRQMRGDAFDPAYRQQFTELVAARRTRIPLQHLTGVAHFRYL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PRPETE +V   + +     +  D  R +DL +G+GA+  AL  E P   
Sbjct: 86  ELKVGPGVFIPRPETETVVQQGIDYL--HAQGIDNPRCIDLCSGSGAIAAALASEVPGSS 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              V++S +A+   ++N   + V+       S   + + G  D+++SNPPYI    +   
Sbjct: 144 VWAVELSEQAIGYTRANCQPHQVNVLHQD-ASQLPAELHGTMDLVISNPPYIPPNAIPR- 201

Query: 184 GLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             EVR+ DP+++L G G DGL   R I       L   G   +E    Q+     +    
Sbjct: 202 EAEVREHDPQMALYGLGEDGLQIPRAITAQAMALLRPGGYYVMEHAEVQRESAAAMLREA 261

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   +D  G  R  
Sbjct: 262 GFTHVAGHEDLSGRARAT 279


>gi|167620579|ref|ZP_02389210.1| hemK protein [Burkholderia thailandensis Bt4]
          Length = 246

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 73/245 (29%), Positives = 115/245 (46%), Gaps = 11/245 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I   D  LD            R    E + ++ G R+F+ +   ++ D   PRPETELL
Sbjct: 1   MITRADEPLDAAAIERYLALEARRAAGEPVAQLTGAREFFGLDFDVTPDVLIPRPETELL 60

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++AL      I+      +LDLG G+GA+ +++    P  +   +D S  AL++A+ NA
Sbjct: 61  VETALD----AIDGIASPCVLDLGAGSGAIAVSIASVRPDARVWALDRSAAALDVARRNA 116

Query: 142 VTNGVSER----FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
                  R       L+SDW+++++    F V+VSNPPYI          ++R F+PR +
Sbjct: 117 RKLLDPARAGGPLRFLESDWYAALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGA 175

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L    DGL+  RTI  G    +   G   +E GY+Q   V  + E+     V +  D   
Sbjct: 176 LTDEDDGLAAIRTIVAGAHAFVAPGGALWIEHGYDQAAAVRALLEAAGFADVESLADLAS 235

Query: 256 NDRVL 260
            +R  
Sbjct: 236 IERAT 240


>gi|294675035|ref|YP_003575651.1| modification methylase, HemK family [Prevotella ruminicola 23]
 gi|294472149|gb|ADE81538.1| modification methylase, HemK family [Prevotella ruminicola 23]
          Length = 291

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 66/268 (24%), Positives = 107/268 (39%), Gaps = 9/268 (3%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     GLS+  +     + L    +  L   + R  K E +  +LG  DF 
Sbjct: 23  EAKALVRWVLDVRFGLSTADIYCGKVTQLSANDQAELEKIMQRLEKAEPVQYVLGVADFC 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV----RILDLGTGTGAVCLALLK 117
             +  ++     PRPET  L          ++ +         +LD+GTG+G + + L  
Sbjct: 83  GRQFYVAPGVLIPRPETAELCHLIGEEFKGKLAEDKGKLKGCSVLDIGTGSGCIAITLAL 142

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           + P  K    DIS +AL IA+ NA   G   +F+   +    +    +DVIVSNPPYI  
Sbjct: 143 DIPDSKVTAWDISDEALAIARHNAQALGADVKFEKHDALALETEADRWDVIVSNPPYICR 202

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              D +   V  ++P  +L     D L  YR I       L + G    EI       +V
Sbjct: 203 KEADEMEENVLKYEPDTALFVPDDDPLLFYRHIMHYAKLALKQGGRLYYEINPIYADSIV 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              ++     +    D  G  R +   +
Sbjct: 263 ENLQTLGFVDIAKIDDQYGKTRFIKATK 290


>gi|296137059|ref|YP_003644301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thiomonas intermedia K12]
 gi|295797181|gb|ADG31971.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thiomonas intermedia K12]
          Length = 306

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 16/269 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ + +  V G S  Q    P+ +LD  +   L     R    E +  +LG R+F+ 
Sbjct: 17  PRLDAQALIEAVLGWSRAQQAAHPERLLDTAELTRLHTLATRLRDGEPLAYVLGEREFFG 76

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ D   PRP+TELLV+ AL  +L  +       +LD+GTG+GA+ +A+    P  
Sbjct: 77  LSFEVTPDVLIPRPDTELLVEIAL-RNLDALPATHAPTVLDMGTGSGAIAIAIAHARPHV 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE-----GLFDVIVSNPP 173
           +   +D S  AL +A+ NA     + R       LQS+W+ ++        FD IVSNPP
Sbjct: 136 QVWALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALHPLATTARFDCIVSNPP 195

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           YI +             +P ++L G     DGL     I     R L  DG   +E GY+
Sbjct: 196 YIAAHDPHLP---ALRHEPALALTGQHPNPDGLGDLHQIIAQADRFLRDDGCLLLEHGYD 252

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           Q   V  + E+     V + +D  G +RV
Sbjct: 253 QAAAVRDLLEAHGYRKVFSARDLAGIERV 281


>gi|317504377|ref|ZP_07962361.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM
           15606]
 gi|315664499|gb|EFV04182.1| protein-(glutamine-N5) methyltransferase [Prevotella salivae DSM
           15606]
          Length = 291

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 114/270 (42%), Gaps = 7/270 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A     + +  +  L+   +       L   ++  L  ++ +      +  + G   F+
Sbjct: 21  EAKAVVRTLVEELFQLTLTDLYAGGLDNLTTAEQQRLETSLQQLEAGIPVQYVTGTARFF 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP---RIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L ++ L+        ++    +R+LD+GTG+G + + L  +
Sbjct: 81  GRDYVVNPHVLIPRPETEVLCETILSAYNQPYCALQPPAPLRVLDIGTGSGCIAVTLALD 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYI 175
                    D+S +AL  A+ NA        F   D L  D  +     FD+IVSNPPY+
Sbjct: 141 LWNSSVSAWDVSGEALLTARENAHRLQAQVNFEWHDVLSLDEAALAATPFDIIVSNPPYV 200

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                  +  +V   +P  +L     D L  YR IAD    HLN  GL + EI      +
Sbjct: 201 CDCERKDMTEQVLAHEPHTALFVPDNDPLLFYRAIADYGVTHLNPHGLLAFEINPIYAEE 260

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             ++ E      + + +D  G +R+++  +
Sbjct: 261 TCKMLEHMGYEQIESKEDQYGKERIVIARK 290


>gi|124025122|ref|YP_001014238.1| putative protein methyltransferase [Prochlorococcus marinus str.
           NATL1A]
 gi|123960190|gb|ABM74973.1| putative protein methyltransferase [Prochlorococcus marinus str.
           NATL1A]
          Length = 273

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 128/264 (48%), Gaps = 12/264 (4%)

Query: 9   SFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVR--SLKHESIHRILGWRDFYNV 63
             L  V G+S  ++   I++P+  +           I +        +  ++    + +V
Sbjct: 13  WLLDMVAGVSWAKLQSIILNPEKFISLDISTDELEVIWKSHLKDQTPLQYLISKCPWRDV 72

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +S++   PR ETE L+D AL     +I   D  R  DLGTG+GA+ ++L K  P + 
Sbjct: 73  ELEVSAEALIPRQETEFLIDIALK----KITNFDSGRWADLGTGSGAIAVSLAKSLPNWN 128

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
           G  VDIS +ALE+AK N      +        DW+  ++   G FD+++SNPPYI S +V
Sbjct: 129 GHAVDISNEALELAKRNLKAIVPNANVRFSLGDWWEPLKRWRGRFDLVLSNPPYIPSDLV 188

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L   V++ +P I+LDGG DG++  R I  G    L K G   +E  Y+Q   +     
Sbjct: 189 EELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQSEKITSFMR 248

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +  V+  KD  G  R  +  R
Sbjct: 249 NIGMEEVSFEKDISGIKRYAICRR 272


>gi|116494652|ref|YP_806386.1| methylase of polypeptide chain release factor [Lactobacillus casei
           ATCC 334]
 gi|116104802|gb|ABJ69944.1| Methylase of polypeptide chain release factor [Lactobacillus casei
           ATCC 334]
          Length = 276

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 9/254 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+    ++ + +       + R  + E    I+G   F+     
Sbjct: 26  ARYVLMTRADFTPSQLILHRQDLMPETRWQQFQQDVERLRQFEPAQYIVGVAPFFGELFK 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV  A        E+R     LDLGTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWAAE------EQRTAQTGLDLGTGSGAIGLTLARKLPQTTMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S +AL +AK NA    V+ +F    SD F+++   +D +V+N PYI       +   
Sbjct: 140 SDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAALPARYDFVVTNLPYIAPEETPVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
              ++P+++L  G  GL+ +      + +HL   G   +E GY Q+  +  +F  +    
Sbjct: 198 TLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGGAAYLEFGYRQEPALRELFAKQLPQA 257

Query: 246 LVNAFKDYGGNDRV 259
            V   +D   + R+
Sbjct: 258 QVTFRRDMADHPRM 271


>gi|311109117|ref|YP_003981970.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310763806|gb|ADP19255.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Achromobacter xylosoxidans A8]
          Length = 274

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 9/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +    L  V       ++      L             R L  E +  +LG R+F  
Sbjct: 16  PRLEVRMLLEHVLAKPRAWLLAHDTDPLLPETAAAYEALAQRRLAGEPMAYLLGHREFMG 75

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++ D   PRP+TE+LV++AL      +       +LDLGTG+GA+ +++       
Sbjct: 76  HRFRVTPDVLIPRPDTEVLVETALEC----LAGLAAPAVLDLGTGSGAIAISIALARRDA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
           + +  D+S  AL +A +      ++     ++  W+ +V     FD+IVSNPPY+     
Sbjct: 132 RVMASDLSAAALAVAAA--NAWDLAASVRLVEGSWYQAVPAGEGFDLIVSNPPYVACDDP 189

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                +VR F+PR +L  G  GL     I  G  RHL + G   +E G++Q   V     
Sbjct: 190 HLDQGDVR-FEPRGALTDGAGGLEDLARIVQGAGRHLKRGGALWLEHGWDQAQAVRDQLA 248

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +     V++ +D  G +R+
Sbjct: 249 AAGFQDVHSRRDLAGIERI 267


>gi|294341236|emb|CAZ89637.1| putative Protein methyltransferase hemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Thiomonas sp. 3As]
          Length = 306

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 16/269 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ + +  V G S  Q    P+ +LD  +   L     R L  E +  +LG R+F+ 
Sbjct: 17  PRLDAQALIEAVLGWSRAQQAAHPERLLDSAELTRLQALATRLLGGEPLAYVLGEREFFG 76

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++ D   PRP+TELLV+ +L   L  +        LD+GTG+GA+ +A+    P  
Sbjct: 77  LSFEVTPDVLIPRPDTELLVELSLRH-LDALPATHAPTALDMGTGSGAIAIAIAHARPHV 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVE-----GLFDVIVSNPP 173
           +   +D S  AL +A+ NA     + R       LQS+W+ +++       FD IVSNPP
Sbjct: 136 RVWALDASAAALAVAQGNARRLLDARRAGGEVHFLQSNWWDALQPPATTARFDCIVSNPP 195

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           YI +             +P ++L G     DGL   R I     R L  DG   +E GY+
Sbjct: 196 YIAAHDPHLP---ALRHEPALALTGQHLNPDGLGDLRQIIAQADRFLRDDGCLLLEHGYD 252

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           Q   V  + E+     V + +D  G +RV
Sbjct: 253 QAAAVRDLLEAHGYREVFSARDLAGIERV 281


>gi|116513792|ref|YP_812698.1| methylase of polypeptide chain release factor [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
 gi|116093107|gb|ABJ58260.1| Methylase of polypeptide chain release factor [Lactobacillus
           delbrueckii subsp. bulgaricus ATCC BAA-365]
          Length = 273

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L    GL+  Q  +  D  L D +       + R  K +S   ILG+  F   RL ++ 
Sbjct: 20  LLAERLGLTPSQFQLKQDMELSDAEVKQARKDMKRLAKGDSPQYILGYAWFLGYRLRVAK 79

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFKG 124
               PR ETE LV+ ALA        ++   +LDLGTG+G + +AL KE+          
Sbjct: 80  GVLIPRFETEELVEWALAHL------QNGDTVLDLGTGSGNIMVALAKEAESRGIKDLHF 133

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+    L I++ N +  G+     T +++    + G FD+I+SNPPYI+    + + 
Sbjct: 134 YASDVKDTPLRISEENFLDYGLD--VTTRKANVLLGL-GKFDLIISNPPYIKPSEKNVMD 190

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRK 243
             V   +P  +L GG DGL+ YR  A+ V  HLN  G   +E G++++ ++  +F E   
Sbjct: 191 KGVLANEPEEALFGGQDGLAFYRKFAEEVRDHLNSGGRFFMEFGFSEEDELKAMFAEKLP 250

Query: 244 LFLVNAFKDYGGNDRVLLF 262
            F V   +D  G  R+L  
Sbjct: 251 DFKVEFRRDMAGKPRMLFG 269


>gi|260890430|ref|ZP_05901693.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii
           F0254]
 gi|260860050|gb|EEX74550.1| protein-(glutamine-N5) methyltransferase [Leptotrichia hofstadii
           F0254]
          Length = 378

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/273 (26%), Positives = 114/273 (41%), Gaps = 11/273 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
           ++   +      V       +       +++ +   +   I +  + +  +  +L  ++F
Sbjct: 106 ESRLIAEIVFSHVLNTDRMMLFTKYRDEIENEKIEKIRYFIQKIGREKFPVQYLLNEQEF 165

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVC 112
           Y  +  +      PR +TE+LV+  +      I K            +ILD+G G+G + 
Sbjct: 166 YGRKFYVDRGVLIPRQDTEVLVEKMIEILKNNILKNKNLEKNLKIHPKILDIGVGSGIIG 225

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           +    E      +GVDIS KALE A+ N     VS     L+S+ F ++E   FD+IVSN
Sbjct: 226 ITAALEIKDSYVLGVDISEKALETAEKNKELLKVS-NIKFLKSNLFENIEFKQFDMIVSN 284

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI       +  +    +P  +L    DGL  Y  I      +L   G    EIGY Q
Sbjct: 285 PPYISLNEAGIMSDDTLLHEPSEALFAENDGLYFYYEICQKALDYLADFGYLLFEIGYKQ 344

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +V  I  S     V   KD  G DRV++  +
Sbjct: 345 GKNVAEIMTSSGFKNVEVIKDLAGLDRVVVGQK 377


>gi|291457339|ref|ZP_06596729.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM
           20213]
 gi|291381174|gb|EFE88692.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium breve DSM
           20213]
          Length = 305

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q     + + R  K E +  I G   
Sbjct: 33  PEHDAKLLLAEAAGVELRDVDKALLMGEELGTAEQLARFQSMLARRAKREPLQYITGHAP 92

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V   L +           R++DL  G+GA+ L+++ E 
Sbjct: 93  FRYLDLKVGPGVFIPRPETETVVQVGLDWLTRNGMIHP--RVVDLCAGSGAIGLSVVSEV 150

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 151 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 210

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G   +E  
Sbjct: 211 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGALVMEHD 269

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 270 VTQGDRLVAFARATGFAAASTGQDWTGRDRYLFA 303


>gi|226354990|ref|YP_002784730.1| hypothetical protein Deide_01670 [Deinococcus deserti VCD115]
 gi|226316980|gb|ACO44976.1| putative methyltransferase, HemK family [Deinococcus deserti
           VCD115]
          Length = 284

 Score =  226 bits (577), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 66/255 (25%), Positives = 107/255 (41%), Gaps = 8/255 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    GLS   +++     +       L   + +      +  +LG  ++  V L
Sbjct: 26  DARALLEHALGLSPTGLLLRGPEQVLPDDAARLNGLLEKRAARVPLQHLLGEVEWGGVHL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              +    PRPET    +  L  SL  +    + R+LD+GTG+GA+ L L    P  +  
Sbjct: 86  RSDTRALIPRPET----EWLLHLSLQDLSAVSLPRVLDVGTGSGALALGLKAARPDAQVW 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS +AL +A+ N+  NG+      +Q    + + G FD+IVSNPPY+          
Sbjct: 142 ATDISPEALTLAQENSARNGLE--VTFVQGSLLAGLAGPFDLIVSNPPYLPESDRLEADP 199

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EV+  DP ++L  G DGL   R +A   +  L       +E+             S    
Sbjct: 200 EVK-HDPALALYAGTDGLELARPLAAQAAGALTPGAPLWLELDPRNATVFAAELRSTGW- 257

Query: 246 LVNAFKDYGGNDRVL 260
             +   D  G +R +
Sbjct: 258 DTSVHPDLTGRERFV 272


>gi|72383531|ref|YP_292886.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
 gi|72003381|gb|AAZ59183.1| modification methylase HemK [Prochlorococcus marinus str. NATL2A]
          Length = 273

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 12/264 (4%)

Query: 9   SFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVR--SLKHESIHRILGWRDFYNV 63
             L  V G+S  ++   I++P+  +           I +        +  ++    + +V
Sbjct: 13  WLLDMVAGVSWAKLQSIILNPEKFISLDISTDELEVIWKSHLKDQTPLQYLISKCPWRDV 72

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +S++   PR ETE L+D AL   +      D  R  DLGTG+GA+ ++L K  P + 
Sbjct: 73  ELEVSAEALIPRQETEFLIDIALKKII----NFDSGRWADLGTGSGAIAVSLAKSLPNWN 128

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
           G   DIS +ALE+AK N      +        DW+  ++   G FD+++SNPPYI S +V
Sbjct: 129 GYATDISNEALELAKRNLKAIVPNANVRFSLGDWWEPLKRWRGRFDLVLSNPPYIPSYLV 188

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L   V++ +P I+LDGG DG++  R I  G    L K G   +E  Y+Q   +    +
Sbjct: 189 EELEPVVKNHEPIIALDGGEDGMNASRKIILGALNGLAKGGWLILEHHYDQSEKITSFMK 248

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +  V+  KD  G  R  +  R
Sbjct: 249 NIGMEEVSFEKDLSGIKRYAICRR 272


>gi|191638151|ref|YP_001987317.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23]
 gi|301066210|ref|YP_003788233.1| methylase of polypeptide chain release factor [Lactobacillus casei
           str. Zhang]
 gi|190712453|emb|CAQ66459.1| Protoporphyrinogen oxidase (Putative) [Lactobacillus casei BL23]
 gi|300438617|gb|ADK18383.1| Methylase of polypeptide chain release factor [Lactobacillus casei
           str. Zhang]
 gi|327382181|gb|AEA53657.1| HemK protein [Lactobacillus casei LC2W]
 gi|327385378|gb|AEA56852.1| HemK protein [Lactobacillus casei BD-II]
          Length = 276

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 111/254 (43%), Gaps = 9/254 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+    ++ + +       + R  + E    I+G   F+     
Sbjct: 26  ARYVLMTRADFTPSQLILHRQDLMPETRWQQFQQDVERLRQFEPAQYIVGVAPFFGELFK 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+R     LDLGTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWVAE------EQRTAQTGLDLGTGSGAIGLTLARKLPQTTMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S +AL +AK NA    V+ +F    SD F+++   +D +V+N PYI       +   
Sbjct: 140 SDVSPEALAVAKQNAKEQQVAVQFTV--SDLFAALPARYDFVVTNLPYIAPEETPVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
              ++P+++L  G  GL+ +      + +HL   G   +E GY Q+  +  +F  +    
Sbjct: 198 TLRYEPKLALFAGHHGLAVFEQFVAALPQHLTAGGAAYLEFGYRQEPALRELFAKQLPQA 257

Query: 246 LVNAFKDYGGNDRV 259
            V   +D   + R+
Sbjct: 258 QVTFRRDMADHPRM 271


>gi|119715987|ref|YP_922952.1| HemK family modification methylase [Nocardioides sp. JS614]
 gi|119536648|gb|ABL81265.1| modification methylase, HemK family [Nocardioides sp. JS614]
          Length = 292

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 102/268 (38%), Gaps = 12/268 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+ + L  V G +   ++   D      +       + R    E +  + G   F +V 
Sbjct: 25  HDAEALLAHVLGTTRAGLVAVEDVAPSALEE--YDALVARRAAREPLQHLTGSVGFRHVE 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV--------VRILDLGTGTGAVCLALL 116
           + +    F PRPETELL   A+   L     R V          ++DL TG+GAV  A+ 
Sbjct: 83  VAVGPGVFVPRPETELLAGWAIEQCLRWSSSRRVGGATAGRNPVVVDLCTGSGAVAKAIA 142

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            E P      V++  +A   A  N     V  R   + +  F  + G  D++  NPPYI 
Sbjct: 143 DEVPTADVHAVELDEEAHRWAGRNLARTTVDLRLGDMAT-AFDDLLGQVDIVTCNPPYIP 201

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + +  E RD DP ++L  G DGL   R +    +  L   G+   E    Q     
Sbjct: 202 LDAWESVAPEARDHDPHLALFSGADGLDAIRALERRAAELLRPGGVVGFEHADVQGESAP 261

Query: 237 RIFESR-KLFLVNAFKDYGGNDRVLLFC 263
            +F +  +   V    D  G  R     
Sbjct: 262 AVFTATDRWVDVRDHDDLAGRARFTTAR 289


>gi|87198312|ref|YP_495569.1| HemK family modification methylase [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87133993|gb|ABD24735.1| [protein release factor]-glutamine N5-methyltransferase
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 291

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G S   +++     +           + R L HE +  I+G  +FY 
Sbjct: 24  ARLDAEVLMAHALGCSRTDLLL---RHMTGAAPEGFAALVERRLGHEPVAYIIGSAEFYG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L ++     PR +TE LV++A      R   R   RILDLGTG+GA+ LA L   P  
Sbjct: 81  LDLAVTPAVLIPRGDTETLVEAAREAFAWRAAPR---RILDLGTGSGALLLAALSLWPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           +GV ++ S +AL +A++N   +  + RF   D  Q DW + + G FD+I+SNPPY+    
Sbjct: 138 EGVAIERSPEALAVARANGARHAPAARFLPGDWTQPDWSADL-GTFDLILSNPPYV--ED 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L L VR  +P  +L  G +GL  YR +   +   L   G+  VEIG+ Q   V  I 
Sbjct: 195 EADLALSVRAHEPSAALFSGPEGLDDYRVLVPQLPGLLTDQGIAIVEIGWQQGQAVSAIA 254

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
            +  +      +D    DR +
Sbjct: 255 RASGMT-ARIHRDLANRDRAV 274


>gi|78777517|ref|YP_393832.1| modification methylase HemK [Sulfurimonas denitrificans DSM 1251]
 gi|78498057|gb|ABB44597.1| Modification methylase HemK [Sulfurimonas denitrificans DSM 1251]
          Length = 276

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   L     +    ++++ D  +  ++   L     R  K+E +  I+G   FY
Sbjct: 24  RASREAQLLLMYHLNVDELWLLMNQDKEV--KEIEKLLEWAQRRAKNEPLEYIVGSVSFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    + S    PRPETELL+D  L       +K   + I+++G G+G + + L K  P 
Sbjct: 82  SEEFYIDSGALIPRPETELLIDEVLKNI---EDKNSPLNIVEVGVGSGIISIILAKSLPN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K + VDIS  AL +A+ N     + +R +         ++   D +VSNPPYI     D
Sbjct: 139 AKFIAVDISQAALGVARKNIEKFSLEDRIELRHGSLLEPIKEKIDYLVSNPPYIAD---D 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                   ++P+ +L GG  G    + + DGV +   +  L S E+GY+QK  +     +
Sbjct: 196 VSLESNLSYEPQNALFGGSVGDEIIKELLDGVLK--AEINLFSCEMGYDQKDKIQNYLNN 253

Query: 242 RKLFLVNAFKDYGGNDR 258
           + L  +  +KDY   DR
Sbjct: 254 KPLKSLVFYKDYSDFDR 270


>gi|315159265|gb|EFU03282.1| protein-(glutamine-N5) methyltransferase [Enterococcus faecalis
           TX0312]
          Length = 277

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 9/249 (3%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G    Q ++     +   +   L   + + L       +LG  +FY     ++  T  PR
Sbjct: 35  GWDKTQWLLHMQEEMPKEEEEQLKTDLAQLLTDYPAQYLLGQAEFYGHSFIVNEHTLIPR 94

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE LV+  L     +      + ++D+GTGTGA+ ++L    P ++ + +D+S KAL 
Sbjct: 95  PETEELVERCL-----KANPDTPLTVVDVGTGTGAIAISLKLARPNWRVIAIDLSEKALT 149

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +AK NA   G     +    +    V     D+++SNPPYI       +   VR ++P+ 
Sbjct: 150 VAKQNAQALGAG--IEFYHGNGLQPVASEKIDLLISNPPYISEQECYLMDASVRTYEPKT 207

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDY 253
           +L    +GL+ Y+ +       L  DG    EIG+ Q   + ++   +     +   KD 
Sbjct: 208 ALFAENNGLALYQQLIHESQTMLKADGKIYFEIGFQQGAALQKLLSAAYPQKTIKIEKDL 267

Query: 254 GGNDRVLLF 262
            GNDR+ + 
Sbjct: 268 SGNDRLAIA 276


>gi|220908864|ref|YP_002484175.1| HemK family modification methylase [Cyanothece sp. PCC 7425]
 gi|219865475|gb|ACL45814.1| modification methylase, HemK family [Cyanothece sp. PCC 7425]
          Length = 314

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 78/280 (27%), Positives = 116/280 (41%), Gaps = 22/280 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDD----RQRFFLTNAIVRS-LKHESIHRILG 56
           QA  +    L  V  L +  + +     L           LT    R       +  ++G
Sbjct: 27  QAQIELDWLLQAVADLDTLSLRLASYRGLAQIPIKLSLRELTGLWHRRWQDRIPLQYLVG 86

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----VRILDLGTGTGAVC 112
              + N++L +S     PRPETE L+D A+       E            DLGTG+GA+ 
Sbjct: 87  EVPWRNLKLHVSPAVLIPRPETEELIDLAIEAVNYHPELSPPHPSSPHWADLGTGSGAIA 146

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSSV-- 161
           L L    P  K   VD S  ALE+A  N              + +R    Q DW   +  
Sbjct: 147 LGLAYSFPTAKIHAVDRSAAALEMAGRNRDRQDWGKDGGAGTLQDRLHFYQGDWLEPLAK 206

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +G    IVSNPPYI + ++D L  EV + +P ++LDGG DGL+  R I +  + +L   
Sbjct: 207 LKGHLTGIVSNPPYIPTELLDELEREVVEHEPSLALDGGADGLTAIREIIETAADYLQPG 266

Query: 221 GLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRV 259
           G+  +E+   Q   V ++ E       +   +D  G  R 
Sbjct: 267 GVLLLEMMSGQDQQVRQLLEQTGRYREIQIHRDLSGVPRF 306


>gi|330684796|gb|EGG96489.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus epidermidis VCU121]
          Length = 278

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      S    ++  +  +    +  L   + R L  E I  I+G++ FY  R T
Sbjct: 25  AEWLLLDTFNWSRTDYLIHMNDEMSVADKAKLGLNLQRMLSGEPIQYIVGFQSFYGYRFT 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S     PRPETE ++   L          D   I D+GTG+G + + L K  P    + 
Sbjct: 85  VSDRCLIPRPETEEVMLHFLNL------CNDGDAIADIGTGSGVLGITLKKLKPTLSVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+   AL++A+ NA  +G  E  D +Q +    +       + ++SNPPYI+   V  +
Sbjct: 139 TDLYEDALDVARLNAEQHG--ENIDFIQGNALKPLIERNIKLNGLISNPPYIDVKEVKDM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-R 242
              V D++P  +L    +G + Y++I + + + L        EIGYNQ   +  +  +  
Sbjct: 197 AKTVVDYEPHQALFAKSEGYAIYQSILNDLPKVLLPGAHVMFEIGYNQGQTLKDMVNNMY 256

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V+ ++D    DR+L
Sbjct: 257 PDKGVSIYQDINQLDRIL 274


>gi|256850892|ref|ZP_05556281.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 27-2-CHN]
 gi|260661106|ref|ZP_05862020.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 115-3-CHN]
 gi|282934196|ref|ZP_06339474.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|297205769|ref|ZP_06923164.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus jensenii JV-V16]
 gi|256615954|gb|EEU21142.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 27-2-CHN]
 gi|260548043|gb|EEX24019.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 115-3-CHN]
 gi|281301810|gb|EFA94076.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|297148895|gb|EFH29193.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus jensenii JV-V16]
          Length = 280

 Score =  226 bits (576), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 15/264 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ D    +    GL+  +  +  DS    +    L     +  ++ S   ILG+  F  
Sbjct: 20  SIEDISYLISERAGLTPSEFQLKQDSEASSKLEKQLQKDFKKLARNVSPQYILGYAWFLG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--- 119
            ++ +      PR ETE LV+ AL          D +RILDLGTG+GA+ +AL KE+   
Sbjct: 80  YKIMVQRGVLIPRFETEELVEWALDHL------HDGMRILDLGTGSGAIMVALAKEASKK 133

Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                     DIS  AL   + N +T  +       +++    +E  FD+I+SNPPYI  
Sbjct: 134 GIKDLTLYASDISDSALRTCEENFLTFDLD--VTVRKANVLIGLE-KFDLIISNPPYIRP 190

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              + +   V   +P  +L GG DGL  YR  A  V  HL  +G   +E G+++K D+ +
Sbjct: 191 EEKNLMDSNVLQNEPEEALFGGKDGLEFYRRFAKQVREHLTDEGQFFLEFGFSEKDDLAK 250

Query: 238 IF-ESRKLFLVNAFKDYGGNDRVL 260
           +F E    F V    D  G  R++
Sbjct: 251 LFTEELPDFKVEFKDDLAGKPRMV 274


>gi|315660272|ref|ZP_07913127.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           lugdunensis M23590]
 gi|315494699|gb|EFU83039.1| protein-(glutamine-N5) methyltransferase [Staphylococcus
           lugdunensis M23590]
          Length = 279

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +   +    ++     +   Q      A+ R L  E I  I+G++ FY     
Sbjct: 25  AEWLMLDLFHWTRTDYLMHMYDEMTIAQETKFNLAVQRMLLGEPIQYIVGFQSFYGYPFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ +   PRPETE ++   L              I+D+GTG+GA+ + + K +P  K + 
Sbjct: 85  VNENCLIPRPETEEVMLHFLNG------CHSQGSIVDVGTGSGAIAITIKKLNPQLKVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            D+  + L IA+ NA  + +      +Q D    +       D +++NPPYI       +
Sbjct: 139 TDLYKETLTIAQENA--SYLDADIIFMQGDVLKPLIQKNIKVDGLITNPPYISEKETCQM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESR 242
              V  ++P  +L    +G + Y  I D + + LN+D   + EIGY Q + + ++  +  
Sbjct: 197 TNTVLKYEPHHALFAENNGFAIYEAILDDLPKVLNEDAFVTFEIGYQQGLQLKQLVLQRY 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               V   KD    DR++ F
Sbjct: 257 PKLDVKVTKDINSLDRIVSF 276


>gi|239621641|ref|ZP_04664672.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515516|gb|EEQ55383.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 302

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q       + R  K E +  I G   
Sbjct: 30  PEHDAKLLLAEAAGVELRDVDRALLMGEELGTTGQLAVFRAMLDRRAKREPLQYITGHAP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 90  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTKNGMIHPC--VVDLCAGSGAIGLSVVSEV 147

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 148 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 207

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 208 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGVLVMEHD 266

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 267 VTQGDRLVAFARATGFAAASTGQDWTGRDRYLFA 300


>gi|260814059|ref|XP_002601733.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae]
 gi|229287035|gb|EEN57745.1| hypothetical protein BRAFLDRAFT_215391 [Branchiostoma floridae]
          Length = 287

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V    S  +I      L   +R  +     + +    I  ILG  DF ++ L 
Sbjct: 26  AEYITGHVLRFKSFSLISPLAQNLTAEERTKVWKLCEKRMNRMPIQYILGEWDFRDLNLV 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGV 125
           +    F PRPETE LV+    +    + + +    IL++G G+GA+ L+LL E P     
Sbjct: 86  MRPPVFIPRPETEELVEHLWLYLQEDLSREEEELGILEVGCGSGAISLSLLHEFPQAHCT 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--------SVEGLFDVIVSNPPYIES 177
            VD++ +A+E+ + NA   G+ +R + ++    S          E  FDVIVSNPPYI +
Sbjct: 146 AVDVTKEAVELTQHNAERLGLCDRLNIIKFIVLSLNDIVFPADFETKFDVIVSNPPYIWT 205

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E+  ++   +L GG DG+   R I     + L   G   +E+       +  
Sbjct: 206 QDMGTLEQEIVGYENHCALHGGTDGMGLIRDIIHTGHKLLKPGGSIWLEVDPRHPDMIQT 265

Query: 238 IFESR---KLFLVNAFKDYG 254
              +    +L L   ++D+ 
Sbjct: 266 YLNNHLQYQLHLAGVYQDFN 285


>gi|23466258|ref|NP_696861.1| methylase protein [Bifidobacterium longum NCC2705]
 gi|46190986|ref|ZP_00120803.2| COG2890: Methylase of polypeptide chain release factors
           [Bifidobacterium longum DJO10A]
 gi|189440752|ref|YP_001955833.1| methylase of polypeptide chain release factor [Bifidobacterium
           longum DJO10A]
 gi|312134005|ref|YP_004001344.1| hemk [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482078|ref|ZP_07941102.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|23327006|gb|AAN25497.1| possible methylase protein [Bifidobacterium longum NCC2705]
 gi|189429187|gb|ACD99335.1| Methylase of polypeptide chain release factor [Bifidobacterium
           longum DJO10A]
 gi|311773308|gb|ADQ02796.1| HemK [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916437|gb|EFV37835.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 294

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q       + R  K E +  I G   
Sbjct: 22  PEHDAKLLLAEAAGVELRDVDRALLMGEELGTTGQLAVFRAMLDRRAKREPLQYITGHAP 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 82  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTKNGMIHPC--VVDLCAGSGAIGLSVVSEV 139

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 140 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 199

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 200 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGVLVMEHD 258

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 259 VTQGDRLVAFARATGFAAASTGQDWTGRDRYLFA 292


>gi|289523199|ref|ZP_06440053.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503742|gb|EFD24906.1| protein-(glutamine-N5) methyltransferase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 283

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 13/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L +S   LC+V G     +I   +  + D +  +L   + R    E +  I     FY
Sbjct: 21  EPLVESDLLLCKVLGCDRSWLIAHKERPIFDYELQYLNALLERRCNKEPLAYIFNEAQFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE LV+ AL+     I        +D GTG+G + ++LL E+P 
Sbjct: 81  GRNFYVGEGVLVPRPETESLVEIALSLVDEGIA-------VDWGTGSGCIVISLLLENPK 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL--FDVIVSNPPYIESV 178
            +G+ +D++ KAL  A  N     + +R      S    +       D +VSNPPY+ + 
Sbjct: 134 LRGIALDVNPKALYWAWKNVDKYDLFDRLTLWHESGKLPAQSAKSGVDAVVSNPPYVPTN 193

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +VD L  EV+ F+P ++LDGG DG   YR + +  S  L + G   VE G  ++ +++ +
Sbjct: 194 LVDTLMSEVKCFEPILALDGGNDGTLWYRFLFERASLWLKEGGWLIVETGGWKEKEILSL 253

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
             +R   L    K   G    ++  R
Sbjct: 254 APAR-FSLCEMKK-LNG-GVCVIAWR 276


>gi|322691738|ref|YP_004221308.1| methylase [Bifidobacterium longum subsp. longum JCM 1217]
 gi|320456594|dbj|BAJ67216.1| putative methylase [Bifidobacterium longum subsp. longum JCM 1217]
          Length = 294

 Score =  225 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q       + R  K E +  I G   
Sbjct: 22  PEHDAKLLLAEAAGVELRDVDRALLMGEELGTTGQLAVFRAMLDRRAKREPLQYITGHAP 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 82  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTKNGMIHPC--VVDLCAGSGAIGLSVVSEV 139

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 140 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 199

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 200 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGVLVMEHD 258

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 259 VTQGDRLVAFASATGFAAASTGQDWTGRDRYLFA 292


>gi|46198381|ref|YP_004048.1| methyltransferase [Thermus thermophilus HB27]
 gi|46196003|gb|AAS80421.1| methyltransferase [Thermus thermophilus HB27]
          Length = 500

 Score =  225 bits (575), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 9/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   TG     +     S L           + R L+   +  ++G  +F+ 
Sbjct: 28  PELEAWDLLAAATGWPRKALYGRLTSPLPQEALDRAEALLKRRLQGYPLQYLVGEVEFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETE LV+ AL   LP        RILD+GTGTGA+ LAL +  P  
Sbjct: 88  LPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRILDVGTGTGAIALALKRALPEA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    ++  KAL +A+ NA   G++     L +     ++ L D++VSNPPY+     + 
Sbjct: 143 EVYATEVDPKALALARENAERLGLA--VVFLPAPLTGGLKDL-DLVVSNPPYLPEAYREK 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              E   ++  ++L  G +GLS  R +A+   R L   G   +E+       + R    +
Sbjct: 200 APRE-LGYESPLALYAGPEGLSVARPLAEEARRSLKPGGYLLLELAPENVHLLARELREK 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V    D  G DR L   
Sbjct: 259 GWKEVAVLPDLAGRDRYLRAR 279


>gi|227546610|ref|ZP_03976659.1| HemK family modification methylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|227212927|gb|EEI80806.1| HemK family modification methylase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
          Length = 302

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q       + R  K E +  I G   
Sbjct: 30  PEHDAKLLLAEAAGVELRDVDRALLMGEELGTTGQLAVFRAMLDRRAKREPLQYITGHAP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 90  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTKNGMIHPC--VVDLCAGSGAIGLSVVSEV 147

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 148 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 207

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 208 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGVLVMEHD 266

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 267 VTQGDRLVAFARATGFAAASTGQDWTGRDRYLFA 300


>gi|322689792|ref|YP_004209526.1| methylase [Bifidobacterium longum subsp. infantis 157F]
 gi|320461128|dbj|BAJ71748.1| putative methylase [Bifidobacterium longum subsp. infantis 157F]
          Length = 294

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    Q       + R  K E +  I G   
Sbjct: 22  PEHDAKLLLAEAAGVELRDVDRALLMGEELGTTGQLAVFRAMLDRRAKREPLQYITGHAP 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 82  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTKNGMIHPC--VVDLCAGSGAIGLSVVSEV 139

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 140 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 199

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 200 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSMDGTLIPERIIERACRLLKPGGVLVMEHD 258

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V    +      +  +D+ G DR L  
Sbjct: 259 VTQGDRLVAFARATGFAAASTGQDWTGRDRYLFA 292


>gi|157412680|ref|YP_001483546.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9215]
 gi|157387255|gb|ABV49960.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9215]
          Length = 289

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 66/217 (30%), Positives = 104/217 (47%), Gaps = 6/217 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            I  + G   + +++L +++    PRPETEL+VD          +K +     +LGTG+G
Sbjct: 74  PIQYLCGITFWRDLKLKVTNKVLIPRPETELIVDIVFNIF---GKKSNKFLFAELGTGSG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166
           A+ +AL    P   GV  DI   ALE+A  N   +           +W+S +E   G  D
Sbjct: 131 AISIALALAYPLSHGVATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGKLD 190

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           + +SNPPYI S   + L  EV++F+P+I+L GG DGL H + I       L + G   +E
Sbjct: 191 LAISNPPYIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILE 250

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++Q   V ++    +   +   KD  G  R  +  
Sbjct: 251 NHFDQSEKVKQLLIKNQFTSIEIVKDLSGIGRFTIGR 287


>gi|218283970|ref|ZP_03489831.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989]
 gi|218215487|gb|EEC89025.1| hypothetical protein EUBIFOR_02427 [Eubacterium biforme DSM 3989]
          Length = 282

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 8/258 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  F+  +       + +  D   +++ +      I      E +  +LG+  FY     
Sbjct: 25  AQLFMVELCRQKDINLYISMDEEANEQIQTDYLEGIHLMENGEPLGYVLGYECFYGYDFI 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV   L+        +D V + D+ TG+GA+ + L  E P    + 
Sbjct: 85  VNEDVLIPRPETEELVGLVLSKFDDYFADKDHVNVFDVATGSGAIGITLNLEEPKMDVIA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            DIS +AL +A+ N    G     + +               D++V NPPYI S     +
Sbjct: 145 SDISKEALVVAQKNNEKLGA--NVNFICGSMLDPFVDRDLHCDILVCNPPYIPSEEK--M 200

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V D++P ++L GG DGL  YR + +     LN+    + E+G++Q   +  +     
Sbjct: 201 EQSVVDYEPHVALFGGNDGLKFYRDVFEKAHLVLNEKAFLAFEMGWDQGEALSNLAREYF 260

Query: 243 KLFLVNAFKDYGGNDRVL 260
           +   +   KD  G DR+L
Sbjct: 261 ESATITVHKDMSGKDRML 278


>gi|58584543|ref|YP_198116.1| methylase of polypeptide chain release factor [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418859|gb|AAW70874.1| Methylase of polypeptide chain release factor [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
          Length = 311

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +  V  +    +I++    +  ++         +  +   I +I+G R+F++  
Sbjct: 57  LDCEIIMQHVLDVERSFIIMNYADQVSIKKEQLFWKLTKKRAERYPISQIIGNREFWSKN 116

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PR ++E+LV +AL +      K+  + I D GTGTG + +++L E     G
Sbjct: 117 FIVNRHVLDPRADSEILVSAALKY---YPNKKQEMEIADFGTGTGCLLISVLSEYEHAVG 173

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S KA ++A  N   + +  R     S W +  +GLFD+I+SNPPYI    +  L 
Sbjct: 174 VGFEKSLKAYKVACQNMEKHNLLGRAKMFPSSW-TECKGLFDLIISNPPYIRRDKLKDLQ 232

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +P+I+LDGGIDGLS Y +I   + R L K+G   +EIG +Q  D+ +I  S +L
Sbjct: 233 AEVQK-EPKIALDGGIDGLSCYLSIFPILKRCLKKNGFAILEIGEDQ-NDIDKIVPSYEL 290

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R ++  R
Sbjct: 291 AFQEYMYDLAGMKRCIVIKR 310


>gi|114798227|ref|YP_759358.1| HemK family methyltransferase [Hyphomonas neptunium ATCC 15444]
 gi|114738401|gb|ABI76526.1| methyltransferase, HemK family [Hyphomonas neptunium ATCC 15444]
          Length = 285

 Score =  224 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A +++   +    G +   +I   ++ +          A+ R    E I  ILG   FY
Sbjct: 24  EAYQNAVLLMVHAFGDTRAVLISAGNAPVPKAVEDLYLAAVERRAAREPIQHILGVTQFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +   +    PR ++E +V++AL     R+ K   + + DLGTG+G +  ALL + P 
Sbjct: 84  GLDIRTDARALIPRIDSECVVEAALD----RMPKNTPLVLADLGTGSGCLLAALLSQRPL 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
            +G GV+ S +A  +A+ N     ++ R       W         D+I+SNPPYI S  +
Sbjct: 140 ARGEGVEASAEAASLARENLDALNLAARGAVFDGSWTQWQGWENADLIISNPPYIASAEI 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR  DP  +LDGG DGL  YR I    +  +        EIG++QK  +  +  
Sbjct: 200 AVLEPEVRAHDPLSALDGGADGLDAYREIIALAAARMKPGAWLVFEIGHDQKAALEWLMA 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 + + +D GGNDR +   R
Sbjct: 260 QTGFEAIASGQDLGGNDRWVGARR 283


>gi|54288339|gb|AAV31627.1| putative protoporphyrinogen oxidase [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 294

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G     +  +  S LD   +  L+  + R L  E I RI GWR+F++
Sbjct: 29  AKTDARCLLGLALGRDMPVLPHEELSPLDAGCQRHLSAMLERRLAGEPISRIRGWREFWS 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R  +S  T +PRP++E ++ +A+ +++    + D +R LDLGTG+G + L+LL E P  
Sbjct: 89  LRFAISQSTLDPRPDSETMIQAAVTWAIANSAQMDPLRCLDLGTGSGCLLLSLLSELPQA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIV 180
            G+G+D+S  A+ +A +NA + G+ +R    Q  +   +   G FD+I+SNPPYI ++ +
Sbjct: 149 IGIGIDVSLDAIGVAVANANSLGLGDRVHFHQHSFCDDLSNFGSFDIILSNPPYIPTLDI 208

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L ++VR+FDP ++LDGG DG+S +R +   +   L+ +G   VEIG  Q+  +V++  
Sbjct: 209 AGLAVDVREFDPALALDGGFDGMSCWRGLLPRLGELLSDEGAAFVEIGKGQEAAIVQLAS 268

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +  L LV + +D     R L
Sbjct: 269 NANLELVKSHRDLSDVIRCL 288


>gi|55980410|ref|YP_143707.1| HemK family methyltransferase [Thermus thermophilus HB8]
 gi|55771823|dbj|BAD70264.1| methyltransferase, HemK family [Thermus thermophilus HB8]
          Length = 500

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 9/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L   TG     +     S L           + R L+   +  ++G  +F+ 
Sbjct: 28  PELEAWDLLAAATGWPRKALYGRLTSSLPQEALDRAEALLKRRLQGYPLQYLVGEVEFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRPETE LV+ AL   LP        RILD+GTGTGA+ LAL +  P  
Sbjct: 88  LPLRVEEGVLIPRPETEGLVELALGLPLP-----PAPRILDVGTGTGAIALALKRALPEA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    ++  KAL +A+ NA   G+S     L +     +  L D++VSNPPY+     + 
Sbjct: 143 EVYATEVDPKALALARENAERLGLS--VAFLPAPLTGGLRDL-DLVVSNPPYLPEAYREK 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              E   ++  ++L  G +GLS  R +A+   R L   G   +E+       + R    +
Sbjct: 200 APRE-LGYESPLALYAGPEGLSVARPLAEEARRSLKPGGYLLLELAPENVHLLARELREK 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               V    D  G DR L   
Sbjct: 259 GWKEVAVLPDLAGRDRYLRAR 279


>gi|307637738|gb|ADN80188.1| protoporphyrinogen oxidase [Helicobacter pylori 908]
 gi|325996339|gb|ADZ51744.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori 2018]
 gi|325997928|gb|ADZ50136.1| protoporphyrinogen oxidase [Helicobacter pylori 2017]
          Length = 276

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L  ++       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELSHKEEVHFFELVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPKLCI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +  + +++VSNPPYI       L 
Sbjct: 139 HASDISPKALEVALKNIERFCLKERVFLKQTCLWDHMP-MIEMLVSNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -NAEFYKDLSGFDRGFVG 269


>gi|296393117|ref|YP_003658001.1| HemK family modification methylase [Segniliparus rotundus DSM
           44985]
 gi|296180264|gb|ADG97170.1| modification methylase, HemK family [Segniliparus rotundus DSM
           44985]
          Length = 286

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 105/266 (39%), Gaps = 8/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+      V   + L + Q+      +    +   +  +LG   F +
Sbjct: 24  PEHDARVLAAHVLGVKPG--FVWQVASLSEEQQERFGWLVRERSRRVPLQHLLGKVFFAS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V + +    F PRPETE L   ALA    R+ +     +LDL +G+G++ L++ +  P  
Sbjct: 82  VEVFVGPGVFIPRPETEQLHVWALAMLRARLWEIPEPVVLDLCSGSGSLGLSIARSVPEA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           K   V+   +AL   + NA T          D       +   G  DVIV+NPPY+ +  
Sbjct: 142 KVALVENDPEALVWTRRNANTPDADVDVVGGDVTDVALLAERNGAVDVIVANPPYVPAGT 201

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 EV DFDP  ++  G DGL     +   V+R L   G   VE        V  +F
Sbjct: 202 PT--PPEVADFDPPQAVFAGPDGLDVITGLVGNVARWLKPGGAFGVEHDEGHADQVRGLF 259

Query: 240 E-SRKLFLVNAFKDYGGNDRVLLFCR 264
               +   V    D  G  R +   R
Sbjct: 260 AHDERFCEVKTMNDLSGRPRFVTGRR 285


>gi|238855956|ref|ZP_04646242.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 269-3]
 gi|260664673|ref|ZP_05865525.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Lactobacillus jensenii SJ-7A-US]
 gi|282934363|ref|ZP_06339630.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
 gi|313471877|ref|ZP_07812369.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 1153]
 gi|238831429|gb|EEQ23780.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 269-3]
 gi|239529208|gb|EEQ68209.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 1153]
 gi|260561738|gb|EEX27710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           protein [Lactobacillus jensenii SJ-7A-US]
 gi|281301573|gb|EFA93850.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus jensenii 208-1]
          Length = 280

 Score =  224 bits (573), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 15/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    +     L+  +  +  D+ +       L     +  ++ S   ILG+  F   ++
Sbjct: 23  DLTYLVSERANLTPSEFKLKQDTEVSSELEKQLQKDFKKLARNVSPQYILGYAWFLGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----P 120
            +      PR ETE LV+ AL          D ++ILDLGTG+GA+ +AL KE+      
Sbjct: 83  MVQRGVLIPRFETEELVEWALKHL------HDGMKILDLGTGSGAIMVALAKEAAKKDIK 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DIS  AL I + N +   +       +++    +E  FD+I+SNPPYI+    
Sbjct: 137 DLTLYASDISDSALRICEENFLKFALD--VTVRKANVLIGLE-KFDLIISNPPYIKPEEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +   V   +P  +L GG DGL  YR  A  + +HL   G   +E G+++K ++ ++F 
Sbjct: 194 NLMDSNVLQNEPEEALFGGEDGLEFYRRFAKQIRKHLTSQGEFFLEFGFSEKDELAKLFA 253

Query: 241 -SRKLFLVNAFKDYGGNDRVL 260
                F +    D  G  R++
Sbjct: 254 TELPDFDIEFKDDLAGKPRMV 274


>gi|255321586|ref|ZP_05362744.1| bifunctional methyltransferase [Campylobacter showae RM3277]
 gi|255301442|gb|EET80701.1| bifunctional methyltransferase [Campylobacter showae RM3277]
          Length = 277

 Score =  224 bits (572), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 10/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R +   L     +S   + ++     D+         + R   +E +  I G   FY
Sbjct: 20  NPSRVAKILLMNYLDVSIEWIFLNQKKEFDE---SGYFALVKRYENYEPLEYITGEAGFY 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE+LV+ +L        + +   + ++GTG+G + + L   S  
Sbjct: 77  GLTFNVKKGVLIPRPETEILVEKSLEILSNLPARNEPPLVAEIGTGSGIISICLALNS-N 135

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K +  DIS  AL +A+ NA   GV  R   ++  +   + G FD++VSNPPYI      
Sbjct: 136 AKIIASDISDDALNLARENAAKFGVEGRIKFVKCAYLDQIYGRFDLLVSNPPYIARDY-- 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V + +P  +L GG  G    + I         K    + E+GY+Q+  +    + 
Sbjct: 194 ELDKFVLN-EPHEALFGGAAGDEILKNIVLVAKNRGVK--YLACEMGYDQRESMQNALKF 250

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
                   ++D  G DR  + 
Sbjct: 251 NGF-EAEFYRDLAGFDRGFVA 270


>gi|330994787|ref|ZP_08318709.1| methyltransferase [Gluconacetobacter sp. SXCC-1]
 gi|329758048|gb|EGG74570.1| methyltransferase [Gluconacetobacter sp. SXCC-1]
          Length = 287

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 124/262 (47%), Gaps = 5/262 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++        G     ++      L D       + + R L HE +  I G   F++
Sbjct: 31  PQREARLLAAHAAGTDLAGLLRIDG--LTDAAHATFIHMLGRRLNHEPMAYITGQAGFWS 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PR ++E LV++ L     R      +R+LD+GTGTG + LA+L E    
Sbjct: 89  LDLAVSPATLIPRADSETLVEAVLHHLPDRTR---ALRVLDIGTGTGCLLLAVLAEYGQA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G DI+  A  +A  NA  N ++ R  TL  +W  +V G FD+++SNPPYI    +  
Sbjct: 146 TGIGTDINPHAARLAAHNAARNALASRCVTLCCNWADAVRGPFDLVLSNPPYIPHADLAG 205

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V   +P  +LDGG DGL  YR +A  +   L   G   +E+G  Q   V  +   R
Sbjct: 206 LMPDVVAHEPARALDGGPDGLVAYRALAAIMPALLAPGGTAVLELGIGQDRSVPALMRER 265

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
            L +     D GG  R L+  +
Sbjct: 266 GLEVAEIRPDLGGIGRALVVKK 287


>gi|325681464|ref|ZP_08160990.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 8]
 gi|324106954|gb|EGC01244.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 8]
          Length = 292

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 70/270 (25%), Positives = 117/270 (43%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLS----SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
            AL D+   + +  G      + + ++  ++      +        + +  E +  +LG 
Sbjct: 22  NALFDACELMGKALGADCRGGAFESLLAGEAETS--VKAEFEGLCQKRVNGEPLQYLLGE 79

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            +FY + L +      PR +TE L D A+A    + +K D + + DL +G+G + LAL K
Sbjct: 80  WEFYGLTLKVGKGVLIPRQDTETLADLAVA----KYKKTDNIVVADLCSGSGCIALALEK 135

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPY 174
                +   V+ S  A    K N   N  + +    D L SD  + +    D+IV NPPY
Sbjct: 136 HLKCREVWAVEKSEAAAGYLKDNLALNHSAVKLVMGDVLDSDTANKIPA-ADLIVCNPPY 194

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           + +  +  L  EV   +P+ +L GG DGL  YR +       L + G    EIG  Q+ D
Sbjct: 195 LTADDMAALQTEV-THEPKEALYGGEDGLDFYRAVTRIWKDRLKQGGTLIYEIGAGQEDD 253

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V++I        V    D  G  R ++  +
Sbjct: 254 VMQIMVQHGFENVRCRPDPCGIMRCVMGTK 283


>gi|88855315|ref|ZP_01129979.1| methyltransferase [marine actinobacterium PHSC20C1]
 gi|88815222|gb|EAR25080.1| methyltransferase [marine actinobacterium PHSC20C1]
          Length = 290

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 110/264 (41%), Gaps = 7/264 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+   +  V  LS  ++ V     + +       +     R    E +  I G   F
Sbjct: 28  PAVDAELLIAHVLELSRGELRVRAVTGATVPGELESTVRELFARRAAREPLQHITGVAPF 87

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N+ L +    F PRPETE +V  A+           +   +DLGTG+GA+ L++  E P
Sbjct: 88  RNLELRVGPGVFVPRPETETVVQFAIDALNASATPEPIG--VDLGTGSGAIALSMATEVP 145

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                 V++S  A+     N    G       +    D F+ ++G  DV++SNPPYI + 
Sbjct: 146 RSHIYAVELSPDAMPYTSENFRRYGADNATLINADLGDAFTELDGTVDVVISNPPYIPAA 205

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +    +EV+  DP ++L GG DG+   R ++    R L+  G   +E G  Q   +  +
Sbjct: 206 AIPR-DIEVQLHDPALALYGGEDGMDVVRRVSLTAKRLLHPGGTLVLEHGEEQAPALAAL 264

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
             +     V   KD  G DR    
Sbjct: 265 LTADGWNAVAHHKDLLGRDRATTA 288


>gi|322792390|gb|EFZ16374.1| hypothetical protein SINV_10611 [Solenopsis invicta]
          Length = 350

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 68/275 (24%), Positives = 120/275 (43%), Gaps = 25/275 (9%)

Query: 8   HSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              +  V G      ++   +  L+  Q   + +     L    +  I+G  DF ++ + 
Sbjct: 73  EHIVAHVIGTKKIIDILNVRNDPLNASQIEKVESLCECRLSRMPVQYIIGEWDFRDITVK 132

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    F PRPETE+LVD  L        + D   IL++G G+GA+ LAL       K   
Sbjct: 133 LVPPIFIPRPETEILVDFVLKRL--STSQADSCEILEIGCGSGAISLALAHACKTIKCTA 190

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEG---------LFDVIV 169
           +D S  A ++   N     ++E+   + +           +++ G         LFD ++
Sbjct: 191 IDASPHACDLTMINRKKLNLTEQITVIHATLNSDASIEILNNLNGADNLDLNSRLFDFVI 250

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+ +  +  L  E+R ++   +LDGG DGL   + +    ++ L   G   +E+  
Sbjct: 251 SNPPYVPTKTIPELQPEIRIYEDLRALDGGDDGLKVIKPLLRYAAKALKPGGRLFIEVDP 310

Query: 230 NQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
           +    V + F ++    KL   + +KD+  NDR +
Sbjct: 311 SHPEYV-QFFTNKYSDLKLHHEHTYKDFCNNDRFV 344


>gi|154252200|ref|YP_001413024.1| HemK family modification methylase [Parvibaculum lavamentivorans
           DS-1]
 gi|154156150|gb|ABS63367.1| modification methylase, HemK family [Parvibaculum lavamentivorans
           DS-1]
          Length = 283

 Score =  224 bits (572), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 4/261 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   +  VTG +  ++I +P + +   +   L     R L  E + RILG R+F+ 
Sbjct: 23  PELDARILVQAVTGATDIEMIREPAAPISAAEEEALAGFERRRLAREPVSRILGAREFWG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++S T +PRP++E L++++L    P        R+LDLGTGTG + L LL E P  
Sbjct: 83  LAFAVTSATLDPRPDSETLIEASLKCLAPLAR----PRLLDLGTGTGCLLLTLLHERPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+GVDIS +AL++A+ N+   G++ R      +W   +   FD+++SNPPYI S  ++ 
Sbjct: 139 SGIGVDISEEALQVARENSARLGLAARARFQPGNWMEGLGEKFDLVISNPPYIASGEIEV 198

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR  DPR++LDGG DGL  YR IA  +   L ++G+  VE+G  Q   V  IFE+ 
Sbjct: 199 LEPEVRGHDPRLALDGGADGLDAYRAIAAALPDVLTQEGVAVVELGAGQADAVRGIFEAA 258

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
              ++    D  G  R L+  
Sbjct: 259 GCAVLRVDPDLSGVPRALVAA 279


>gi|254525471|ref|ZP_05137523.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9202]
 gi|221536895|gb|EEE39348.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9202]
          Length = 289

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 6/217 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            I  + G   + +++L ++     PRPETEL+VD          +K +     +LGTG+G
Sbjct: 74  PIQYLCGITFWRDLKLKVTDKVLIPRPETELIVDIVFKIF---GKKSNKFLFAELGTGSG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166
           A+ +AL    P   G+  DI   ALE+A  N   +           +W+S +E   G  D
Sbjct: 131 AISIALALAYPLSHGMATDIDQNALEVAIRNYRNSSKQSNLKFFCGNWWSPLESFKGRLD 190

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           + +SNPPYI S   + L  EV++F+P+I+L GG DGL H + I       L + G   +E
Sbjct: 191 LAISNPPYIPSDTYEKLPKEVKNFEPKIALLGGEDGLKHIKEIIQKAPLFLKEKGWLILE 250

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++Q   V ++    +   +   KD  G  R  +  
Sbjct: 251 NHFDQSEKVKQLLIKNQFTSIEIVKDLSGIGRFTIGR 287


>gi|225022789|ref|ZP_03711981.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224944396|gb|EEG25605.1| hypothetical protein CORMATOL_02834 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 293

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 99/261 (37%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+H+    + G     V +   + L           I R    E +  ILG   F  
Sbjct: 34  PRHDAHTLAAHLIGTDPLTVRLMSPTDLPATFHHDYAELITRRAHREPLQHILGTAPFGP 93

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+    F PRPETE L D         +       I+DL TG+GA+   L    P  
Sbjct: 94  LTLTVGPGVFIPRPETEQLADWV----ATHLGNTPNPLIIDLCTGSGAIAGYLAHACPDA 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               V++S +AL    +N    GV+    D         + G    +V+NPPY+      
Sbjct: 150 NIYAVELSPEALTYTHTNLDPLGVTIVAGDATNPTLLEHLNGKATAVVTNPPYVPHTT-- 207

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP +++ GG  G+     +     R L   G+ + E       DVV++   
Sbjct: 208 DLQPEVYA-DPPMAVFGGDTGMDVITRLIPTARRLLAPGGVFACEHDDTTGPDVVKLVAE 266

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L  V   +D+ G  R +  
Sbjct: 267 AGLRQVTQHQDWAGQPRFVTA 287


>gi|260655566|ref|ZP_05861054.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Jonquetella anthropi E3_33 E1]
 gi|260630014|gb|EEX48208.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Jonquetella anthropi E3_33 E1]
          Length = 285

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 11/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++ + L  + G +   +       +   +   +++A+ R L  E +  I G   F+ 
Sbjct: 28  PAVEADALLGGLFGWNRTALHARLQDPVGAEEARVISSALCRRLNREPVQYITGRCQFWG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +      PRPETE LV + L        +      LD GTGTG + L+LL E P  
Sbjct: 88  RNLKVLPGCLVPRPETEFLVQAVL-------SRFKAGTFLDWGTGTGCIALSLLTEQPKA 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + V  +I+ ++++ A  N    G+  R     S     + G  FD+I+SNPPY+ S  VD
Sbjct: 141 RAVMAEINPRSIKCAWENLKEAGLLSRALLWHSRTPDDIPGGPFDLIISNPPYVPSGQVD 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
            L  EV  ++PR++LDGG DGL  Y  +       L   GL +VE  G +Q   + ++ E
Sbjct: 201 GLMPEVSQWEPRVALDGGPDGLVPYGPLIYFARSRLVPGGLLAVEFGGASQVQSLRQMAE 260

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
              L  +    D  G  R  L+ +
Sbjct: 261 --GLSELECGADLSGEKRYFLWQK 282


>gi|222099157|ref|YP_002533725.1| HemK protein [Thermotoga neapolitana DSM 4359]
 gi|221571547|gb|ACM22359.1| HemK protein [Thermotoga neapolitana DSM 4359]
          Length = 255

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 20/266 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             + ++     +V G+    V+   D ++ ++++  +   + +      +H ILG ++F 
Sbjct: 4   NPVLEAILIAAKVLGVRKEDVVT-KDIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFM 62

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +    F PRPETE LV+ AL      I++  +  + D+GTG+GA+ +++ K    
Sbjct: 63  GLSFFVEEGVFIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK-FSG 117

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178
                 DIS KA+E++  NA  +GV +RF   +  +    E      ++I+SNPPY++  
Sbjct: 118 AIVFATDISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKMEMILSNPPYVKMS 177

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  +V  F+P  +L  G DGL  YR       R+  +  +  +EIG +Q  ++ +I
Sbjct: 178 --ARLPQDVL-FEPSEALFAGEDGLDFYREFFR---RYSTEGKIVLMEIGEDQVEELKKI 231

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                       KD  G  R L   R
Sbjct: 232 VPGAAF-----LKDTSGRYRFLHINR 252


>gi|296775659|gb|ADH42936.1| polypeptide chain release factor methylase [uncultured SAR11
           cluster alpha proteobacterium H17925_23J24]
          Length = 275

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 8/260 (3%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             DS   L  + G+   ++++D + +++  +     + I+R  K+E I  I   ++F + 
Sbjct: 23  RLDSEIILSHIMGVPREKLLID-ERIIEHDKIIKFKSLILRRSKNEPIAYITNNKEFRST 81

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                +++  PRPET LL+D        +I K   +  L++G GTG +  ++LKE    K
Sbjct: 82  NFFXDNNSLIPRPETXLLIDPI-----SKIFKNKKLFFLEVGIGTGCISFSILKEIMSSK 136

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
           G+G+DIS + L+ AK N      + R    +          FD+IVSNPPY+    V+ L
Sbjct: 137 GIGIDISNRTLKNAKINLKK--FNNRIKLFRKSIEDIRNIKFDLIVSNPPYVIKREVNRL 194

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             +++ ++PRI+LDGG DGL   + +       L  +G+ ++EIG  Q   V+ + +S  
Sbjct: 195 SSDIKKYEPRIALDGGNDGLDVIKKVIYKSKYILKSNGILALEIGTGQFRSVMALLKSNN 254

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
                  +DY  N R +   
Sbjct: 255 FKKKTLIRDYRDNVRCIFST 274


>gi|317056867|ref|YP_004105334.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 7]
 gi|315449136|gb|ADU22700.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Ruminococcus albus 7]
          Length = 283

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 109/272 (40%), Gaps = 19/272 (6%)

Query: 2   QALRDSHSFLCRVTGLS------SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL 55
            A  D    L    G        S  +  + D +L             R    E +  +L
Sbjct: 21  NAYFDCSELLGMSMGKDCRSGAFSSALDDEADGILSKD----FEKLCERRRNGEPLQYLL 76

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G  +F  + L +      PR +TE LV+ A+     + +  D +  +DL +G+G + LA+
Sbjct: 77  GEWEFCGIPLKVGKGVLIPRQDTETLVELAVN----KYKNTDGIVAVDLCSGSGCIALAV 132

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNP 172
            +     K   V+ S  A    + N   NG + +    D L+     S+    D+IV NP
Sbjct: 133 ERFLKCSKVYAVEKSEAAAVHLRENLKMNGSAVQLIMGDVLEYGCAESIPE-CDLIVCNP 191

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+    ++ L  EV  ++P  +L GG DGL  YR +       L   G    EIG  Q+
Sbjct: 192 PYLTGEDMERLQKEV-TYEPVEALFGGEDGLDFYRAVTRIWKNRLKTGGTLIYEIGMGQE 250

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            DV++I        V    D  G  R ++  +
Sbjct: 251 DDVMQIMVQHGFENVRCKPDPCGIMRCVMGTK 282


>gi|7705409|ref|NP_057257.1| hemK methyltransferase family member 1 [Homo sapiens]
 gi|18203634|sp|Q9Y5R4|HEMK1_HUMAN RecName: Full=HemK methyltransferase family member 1; AltName:
           Full=M.HsaHemKP
 gi|4589248|gb|AAD26417.1|AF131220_1 HEMK homolog [Homo sapiens]
 gi|5764550|gb|AAD51328.1|AF172244_1 HEMK homolog 7kb isoform [Homo sapiens]
 gi|12653971|gb|AAH00781.1| HemK methyltransferase family member 1 [Homo sapiens]
 gi|119585529|gb|EAW65125.1| HemK methyltransferase family member 1, isoform CRA_a [Homo
           sapiens]
 gi|123982676|gb|ABM83079.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|123982686|gb|ABM83084.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|123997355|gb|ABM86279.1| HemK methyltransferase family member 1 [synthetic construct]
 gi|307684470|dbj|BAJ20275.1| HemK methyltransferase family member 1 [synthetic construct]
          Length = 338

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D+IV
Sbjct: 178 LSQLPQSRVIAVDKREAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTHLPWGPMDLIV 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+    ++ L  E+R ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 RHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRR 335


>gi|257440234|ref|ZP_05615989.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii A2-165]
 gi|257197268|gb|EEU95552.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii A2-165]
          Length = 283

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 10/242 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+ L   Q   L     R    E +  + G   F +  L +      PR +TE++ ++A 
Sbjct: 47  DAPLGAEQAERLEALTARRAAREPLQYLCGSWPFLDFELAVGPGVLCPRADTEVVAEAAA 106

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 +   +  R+LDL  GTG + L + +  P  +   ++ S  A    + NA  + V
Sbjct: 107 GM----LAGVEAPRVLDLCAGTGCLGLGVKRFCPAAQVTSLEKSPAAYRYLEQNAHLSPV 162

Query: 147 SERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                 +Q D F+      EG  D+IVSNPPY+ +  +  L  EV   +P ++L+ G DG
Sbjct: 163 L-TITPVQGDLFTYWQTLPEGQLDLIVSNPPYLTAAEMGALQPEVAQ-EPAMALEAGEDG 220

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  YR IA+   + L   G  ++EIG+ Q+  V  +  +     +   KD+GGNDR ++ 
Sbjct: 221 LVFYRAIAEHYQKVLRPGGALALEIGWQQREAVTALLAANGWTDIVCRKDFGGNDRCVMA 280

Query: 263 CR 264
            +
Sbjct: 281 RK 282


>gi|34556665|ref|NP_906480.1| protoporphyrinogen oxidase [Wolinella succinogenes DSM 1740]
 gi|34482379|emb|CAE09380.1| PROTOPORPHYRINOGEN OXIDASE [Wolinella succinogenes]
          Length = 283

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  +       +    +++L D +     + + R L+ E I  IL    FY
Sbjct: 21  RPRLEAEILLQELLKKERSWLHAHDETLLSDEESQNYQSLLKRRLQGEPIEYILERASFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++S    PRPETE+L+D A       I    + R+ ++G G+G +   L    P 
Sbjct: 81  SRDFYVASGVLIPRPETEILIDWA----SSLIASHPICRVAEVGIGSGIISSTLALLHPH 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS +ALE+A+ N    G   R           +EG FD+++SNPPYI      
Sbjct: 137 LTFEASDISPRALEVARENLKRMGAESRITLHLGSLLEPLEGEFDLLLSNPPYIAQNTPL 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                  +F+P  +L GG  G      +     +          E+GY+Q+  + R  E 
Sbjct: 197 PKP---LNFEPSEALFGGERGSELLEELIKEAQKRSIP--YMIAEMGYDQRGAIERFMER 251

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                +  ++D  G DR  +  
Sbjct: 252 IPHQELRFYQDLAGLDRGFIVR 273


>gi|124515208|gb|EAY56719.1| Modification methylase (HemK) [Leptospirillum rubarum]
          Length = 293

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 126/268 (47%), Gaps = 14/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           + R+S   L  +              VL D       + + R  + E  H I G   F  
Sbjct: 33  SARESRDLLGEILE-DPLAPWTRDREVLPDELSACYASWVERRRQREPFHLITGSVPFLE 91

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R  ++  T  PRPETE LV++ L      ++ R   RILDLG G+G + ++LLK+ P  
Sbjct: 92  ERFAVAPGTLIPRPETESLVENVLRI----LDSRSPERILDLGCGSGILGISLLKKFPKA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIV 180
             + VD S   LE+++ NA+  GV  R   +Q DW     ++  FD+IVSNPPYI S  +
Sbjct: 148 HCLAVDRSVVPLEVSRKNALALGVLSRIHFVQGDWTEMLRLDQGFDLIVSNPPYIASGDL 207

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E+  ++PR +LDGG DGL  YR +   +   L+  G+ +VEIG  Q         
Sbjct: 208 SGLDPEILFYEPREALDGGPDGLVFYRRLMAVLPGLLSTGGVAAVEIGSCQGDFFR---S 264

Query: 241 SRKLFL----VNAFKDYGGNDRVLLFCR 264
                        F D  G DR++L+ +
Sbjct: 265 DAGFVSGCGAPLVFPDILGLDRIVLWKK 292


>gi|42527988|ref|NP_973086.1| HemK family modification methylase [Treponema denticola ATCC 35405]
 gi|41819033|gb|AAS13005.1| modification methylase, HemK family [Treponema denticola ATCC
           35405]
          Length = 329

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 36/293 (12%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +AL D+   +  +       ++   D       +      + +      I  + G +DF+
Sbjct: 32  EALFDADILIAHILKKERSWLLSHSDFDFLPY-KNEFEAFVQKRSSGIPIAYLTGTKDFF 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-- 119
                ++ +   P+P+TE LV+ AL F++ +++K + + +LD+ TG+G + L+L  E   
Sbjct: 91  GRTFYVNENVLIPKPDTETLVELALNFAMEKLKKNEPLFVLDICTGSGCIGLSLAAELYE 150

Query: 120 -----------------------PFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTL 153
                                    F  +  DIS +AL++ K N    + + + +R   +
Sbjct: 151 NLSQTSNAFDKPQRAQRTQSYFDRSFFLILADISEEALKVCKKNMDSLLPSALYKRALAV 210

Query: 154 QSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ++D              +D+I +NPPY+ S + + L  + R  +P ++LDGGI+GL    
Sbjct: 211 KADLHLPFPCVPEPKRSYDLITANPPYVPSRLTESLLEDGRS-EPCLALDGGIEGLDLIP 269

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            +A+     LN  G   VE+G         IF S     V   KD  GNDRV+
Sbjct: 270 PLAENSYLSLNLGGKLFVEVGEYHAAQAAEIFRSAGFSQVQIHKDLAGNDRVI 322


>gi|85711980|ref|ZP_01043034.1| Modification methylase, HemK family protein [Idiomarina baltica
           OS145]
 gi|85694166|gb|EAQ32110.1| Modification methylase, HemK family protein [Idiomarina baltica
           OS145]
          Length = 308

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 116/262 (44%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A+ ++ + L  V  L+  ++I      L  +++      + + +   +    +L    F
Sbjct: 40  NAVEEARALLGYVLSLTPDELIDMRHCRLTQQEKTQYVELLGKRIADRKPAAYLLNQAWF 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L    +    R+LD+ TG+G + +A     P
Sbjct: 100 AGLPFYVDERVLVPRSPFAELIEQGFQPWLTHAPE----RVLDMCTGSGCIAVACAYAFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    DIS  AL +A+ N   +G+ E+   +QSD F+ ++G  +D+IV+NPPY+++  
Sbjct: 156 EAEIDATDISADALSVAEFNIGEHGLEEQVFPIQSDIFTGLQGQQYDLIVTNPPYVDAED 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P + L  G DGLS   T+    + HL  +GL   E+G N    +   +
Sbjct: 216 MSDLPDEFR-HEPELGLAAGDDGLSLVDTMLLEAADHLTDNGLLFCEVG-NSMAALDEKY 273

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  +   +  GG+   +L
Sbjct: 274 PETGFIWLEFER--GGHGVFVL 293


>gi|213691479|ref|YP_002322065.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522940|gb|ACJ51687.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457552|dbj|BAJ68173.1| putative methylase [Bifidobacterium longum subsp. infantis ATCC
           15697]
          Length = 294

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 17/274 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D+   L    G+    V   ++  + +    +     + + R  K E +  I G   
Sbjct: 22  PEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARFQSMLARRAKREPLQYITGHAP 81

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PRPETE +V + L +            ++DL  G+GA+ L+++ E 
Sbjct: 82  FRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPC--VVDLCAGSGAIGLSVVSEV 139

Query: 120 PFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P  +   V++S    E  + N            +N   E  D       + ++G  D+++
Sbjct: 140 PGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVI 199

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD+DP ++L GG  DG      I +   R L   G+  +E  
Sbjct: 200 TNPPYVPQTDIPE-QPEVRDWDPELALYGGSADGTLIPERIIERAYRLLKPGGVLVMEHD 258

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             Q   +V   ++      +  KD+ G DR L  
Sbjct: 259 LTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFA 292


>gi|300088067|ref|YP_003758589.1| protein-(glutamine-N5) methyltransferase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527800|gb|ADJ26268.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 273

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           M +  ++   +  +TGL+   +   P+  L   +       + R    E +  + G  +F
Sbjct: 17  MASEFEAEILIAHITGLTRAGIHAHPERELTAAEEARYRALLERLSAGEPLQYLTGKMEF 76

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +   ++     PRPETE++ + AL  +    +  D   I D+G G+GA+ + L    P
Sbjct: 77  YGLEFEVNPSVLVPRPETEIMAERALNIA----KGYDRPAIADIGCGSGALAVTLAVRLP 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                  DIS  ALE A+ NAV + V+      +S+  S +  L FD+I +N PY+ S  
Sbjct: 133 RSTVTAADISPTALETARRNAVRHHVA-NIGFRKSELLSGLTDLNFDIICANLPYVPSAE 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V         F+PR++LDGG DGL   R +   ++    +     +E G  Q   V R+ 
Sbjct: 192 VS-----ANRFEPRLALDGGTDGLDLIRRLLAQIAGLPRRPDWLLLEFGTGQAAGVKRLI 246

Query: 240 ESR-KLFLVNAFKDYGGNDRVLL 261
                        D    +RV +
Sbjct: 247 AEHLPHSRTEILTDLIPLERVSV 269


>gi|148272338|ref|YP_001221899.1| putative methylase of peptide chain release factors [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830268|emb|CAN01202.1| putative methylase of peptide chain release factors [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 291

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 10/268 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
               D+   +  V GLS  QV       + +D      +     R  + E +  I G   
Sbjct: 29  DPAVDAELLVGHVLGLSRGQVQSRAITRAAVDAGDAARVLELTARRARREPLQHITGVAH 88

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETE +   A+        +  V   +DLGTG+GA+ LAL  E 
Sbjct: 89  FRSLELLVGPGVFVPRPETEHVAQLAIDALTAAPGEAPVA--VDLGTGSGALALALATEV 146

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +   +++S +A      N     ++   D +  D    F  ++G   V+VSNPPYI 
Sbjct: 147 PHARVHAIEVSPEAHAWTARNVER--LAPHVDLVLGDLADAFPGLDGTVSVVVSNPPYIP 204

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +     EVR  DP ++L GG DGL   R ++    R L+  G   +E G  Q   + 
Sbjct: 205 ADAIPR-DPEVRLHDPALALYGGADGLDVVRLVSTTARRLLHPGGALVIEHGELQGDAIR 263

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + ++         +D    DR     R
Sbjct: 264 ALLDADGWRATATHEDLTRRDRATTALR 291


>gi|91216496|ref|ZP_01253462.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
           700755]
 gi|91185290|gb|EAS71667.1| putative protoporphyrinogen oxidase [Psychroflexus torquis ATCC
           700755]
          Length = 281

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 130/256 (50%), Gaps = 9/256 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                 +  L +H ++++ ++ LD ++      A  R    E IH ILG+ +F+ +R  +
Sbjct: 29  KWLAEDLLDLKTHDLLLESEANLDSKKLVEFKKAQSRLEAQEPIHYILGYTEFFGLRFRV 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           ++    PRPETE LV+  L     +   +  + ILDLGTG+G + +AL K  P  K   +
Sbjct: 89  NTSVLIPRPETEELVEWILE---DQKFSKSQLSILDLGTGSGCIPIALAKHLPQAKLKAL 145

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGL 185
           DIS +AL++A+ N+  N    + +  Q+D  +   +    D++VSNPPY++      +  
Sbjct: 146 DISSEALKLAELNSEDNNT--KIEYTQADLLTLKHLPEEIDIVVSNPPYVKFNEQAQMQD 203

Query: 186 EVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V   +P ++L     D L  YR IA+  S+ + K  L  VEI  N   +  ++F+S   
Sbjct: 204 NVLKNEPHLALFVKDSDPLIFYRRIAELTSK-MRKRPLVYVEINQNLAEETRQLFKSFGF 262

Query: 245 FLVNAFKDYGGNDRVL 260
             +   KD+ GN R+L
Sbjct: 263 QSLELRKDFRGNYRML 278


>gi|114777341|ref|ZP_01452338.1| hemK protein [Mariprofundus ferrooxydans PV-1]
 gi|114552123|gb|EAU54625.1| hemK protein [Mariprofundus ferrooxydans PV-1]
          Length = 279

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 20/269 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V   S   +I+                 + R L  E +  I G ++F++
Sbjct: 23  PRLDAELLLMHVWPCSRTDLIIRAHDEPPATVSRHFAALLQRRLAREPLAYITGEKEFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +S D   PRPETE L+++ LA      ++    +  D+GTG+G + + L  E P  
Sbjct: 83  RPFRVSPDVLIPRPETEHLIEAVLARF---PDQSAPYQFCDIGTGSGCIAVTLAAEYPHA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVI 179
                DIS  +L +A++NA    V+ R      D   ++   +G FDV++SNPPY+ S  
Sbjct: 140 AVTATDISEASLRMAQTNAAALNVASRLAWRSGDLLQALQPEDGPFDVVISNPPYVSSDE 199

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG----YNQKVDV 235
           +  L  E    +PR +L    DGL    TI +     L   G   VE G     +    +
Sbjct: 200 MHGLEPE-LALEPRHALTDEADGLQLLATILNDAPVCLKPHGYIIVETGTCGLPDTPESL 258

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             I E          +D  G  R  ++ R
Sbjct: 259 --IMEEE-------IRDLAGLLRGAVYKR 278


>gi|29840417|ref|NP_829523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila caviae GPIC]
 gi|29834766|gb|AAP05401.1| modification methylase, HemK family [Chlamydophila caviae GPIC]
          Length = 283

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 113/259 (43%), Gaps = 10/259 (3%)

Query: 5   RDSHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           R++   L     + S  Q+       LD+         I +  +      I G   F  +
Sbjct: 24  REAADVLMDFLEIRSRAQL---ASITLDEHLIPAYWERIQKRAQRYPTAYIHGSVHFLGL 80

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L + S    PR ETELL +  + +         +    D+  G+G + L++ K  P  +
Sbjct: 81  HLEVDSRVLIPRMETELLAEQIVKYLSDH---PHIQTFYDVCCGSGCLGLSIKKYCPNIQ 137

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DI  KA+ +AK+NA  N +    + L  D F+      D  V NPPY+    +  +
Sbjct: 138 VILSDICSKAVAVAKTNAFKNNL--NVEILNGDLFAPYSCPGDAFVCNPPYLSFDEILHV 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EVR  +P  +L GG  GL  Y  IA+ ++  L   G+  +EIGY Q   V RIF +R 
Sbjct: 196 DPEVRCHEPWKALVGGSSGLEFYERIANELNTILLPRGVGWLEIGYKQGSSVKRIFANRG 255

Query: 244 LFLVNAFKDYGGNDRVLLF 262
           +   N ++D  G DR+   
Sbjct: 256 ISG-NIYQDLSGCDRIFFL 273


>gi|210135233|ref|YP_002301672.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori P12]
 gi|210133201|gb|ACJ08192.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori P12]
          Length = 276

 Score =  223 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L   +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELSHEEEVRFFELVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPKLCI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +  + +++VSNPPYI       L 
Sbjct: 139 YASDISPKALEVALKNIERFNLKERVFLKQTHLWDHMP-MIEMLVSNPPYIAKGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAGLKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|189183834|ref|YP_001937619.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180605|dbj|BAG40385.1| possible protoporphyrinogen oxidase [Orientia tsutsugamushi str.
           Ikeda]
          Length = 288

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 4/265 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            +  +S   L  + G S   ++   D +L +         I    K+  I  ++G+++FY
Sbjct: 21  NSAFESRLLLAHIIGQSQEYILFHSDHLLLNSDYNQFLKMIKLRTKYLPIAYLIGYKEFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP--RIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    +      PRP++E L+D+ +         +    ++IL+LG G+G + + LL E 
Sbjct: 81  SRNFIVDKSVLIPRPDSETLIDAVVQDYRKIANYQPSAPIKILELGVGSGCLIITLLLEL 140

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
               GVG DIS  AL IA  N     + +  + +QS+WFS ++    +D+I++NPPY+  
Sbjct: 141 SNAIGVGSDISISALNIASRNRQKYKLEKSLNLVQSNWFSGLDVGEKYDIIIANPPYVSD 200

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E    +P I+L    +GL  Y+ IA  +   LN +G   +E  YN+   V  
Sbjct: 201 SELRILSRETLLHEPHIALFSNNNGLQSYQEIAPLIPSFLNSNGRLYLECSYNKAEMVCA 260

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLF 262
           +     L L N + D+    R L F
Sbjct: 261 LCFKSGLILENKYYDFNSYCRCLKF 285


>gi|109039399|ref|XP_001098011.1| PREDICTED: hemK methyltransferase family member 1 isoform 2 [Macaca
           mulatta]
          Length = 338

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/278 (27%), Positives = 117/278 (42%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSYAVGSPGSPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D+++
Sbjct: 178 LSQLPQSRVIAVDKGEAAISLTHENAQRLQLQDRIWIIHLDMTSERSWTHLPWGPVDLVI 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPYI    ++ L  E+R ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYIFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                V    +SR    L LV   KD+ G  R L   R
Sbjct: 298 RHPELVSSWLQSRPELYLNLVAVRKDFCGRSRFLHIQR 335


>gi|154173807|ref|YP_001408445.1| modification methylase HemK [Campylobacter curvus 525.92]
 gi|112802935|gb|EAU00279.1| modification methylase HemK [Campylobacter curvus 525.92]
          Length = 278

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 13/252 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    G+S+  + ++  + L D         + R  ++E +  I    DFY +  +
Sbjct: 25  AKLLLMHHLGMSAEWIFLNLSADLADE--SGYFALVRRFCEYEPLGYITSKADFYGLNFS 82

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE+LVD +L   +         R+ ++GTG+G + + +   SP  K   
Sbjct: 83  VRKGVLIPRPETEILVDKSLEILV----NLPAARVAEIGTGSGIISICIALNSP-AKITA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DI+  AL++A+ NA   GV +R + ++  +   V G FD++VSNPPYI       L   
Sbjct: 138 TDINETALDLARENAAKFGVVDRIEFIKCAYLDDVSGEFDLLVSNPPYIAQDYK--LDKF 195

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V + +P  +L GG+ G    + I         K+   + E+GY+QK  + +  +      
Sbjct: 196 VLN-EPHNALFGGLTGDEILKNIILLARNRRVKN--LACEMGYDQKSSLEKALKFNGF-E 251

Query: 247 VNAFKDYGGNDR 258
              ++D  G DR
Sbjct: 252 AKFYQDLAGFDR 263


>gi|268319748|ref|YP_003293404.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785]
 gi|262398123|emb|CAX67137.1| methyltransferase, HemK family [Lactobacillus johnsonii FI9785]
          Length = 280

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  +  +  +  L   Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DIDYVLGERLGYTPSEFELHINDELTPEQEKQALKDMKKLRRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----- 120
            ++     PR ETE LV  AL             +ILDLGTG+GA+ +AL+K++      
Sbjct: 83  LVNRGVLIPRFETEELVKWALENI------ESGKKILDLGTGSGAIMVALVKQAQKQGIQ 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            F     DI+  AL  ++ N +   +     T +++    +E  FD+I+SNPPYI+    
Sbjct: 137 NFNLYASDITDSALRESEENFLKYDLD--VKTRKANVLVGLE-KFDMIISNPPYIKMSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +   V   +P  +L GG DGL  YR  A  V  HLN  G   +E G+++K  +  +FE
Sbjct: 194 NLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQFFLEFGFSEKEQLKELFE 253

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFC 263
                F +    D  G  R++   
Sbjct: 254 TELPDFEIEFRDDLAGKPRMVHGR 277


>gi|297157198|gb|ADI06910.1| putative methyltransferase [Streptomyces bingchenggensis BCW-1]
          Length = 281

 Score =  223 bits (570), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D R       A+ R    E +  I G   F  + L
Sbjct: 26  DAEELAAFVHGVKRGELHGVADADFDAR----YWEAVARREAREPLQHITGRAFFRYLEL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V  A+           +  I+DL +G+GA+ LAL +E P  +  
Sbjct: 82  QVGPGVFVPRPETESVVGWAIDAVRAMDVVEPL--IVDLCSGSGAIALALAQEVPRSRVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
            V++   AL  A+ N        R      D  +++   +G  D+++SNPPYI     + 
Sbjct: 140 AVELDEGALRWARKNVE----GSRVVLHHGDALTALPELDGQVDLVISNPPYIPLTEWEY 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ES 241
           +  E RD DP+++L  G DGL   R +     R L   G+  +E    Q   V  IF E 
Sbjct: 196 VAPEARDHDPQLALFSGEDGLDVIRGLERTAHRLLRHGGVVVIEHADTQGGQVPWIFTEE 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           R         D     R     +
Sbjct: 256 RGWADAADHPDLNKRPRFATARK 278


>gi|116515053|ref|YP_802682.1| hypothetical protein BCc_112 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|116256907|gb|ABJ90589.1| N5-glutamine methyltransferase, release factors activity modulator
           [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 277

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 8/261 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A  DS   LC V  +S   +       +  +    L N + R +  E I  I+  ++F
Sbjct: 18  LTAKLDSEVLLCFVLKISKKDLFYKNKKKIKIKYLLILNNFLFRRVLGEPIAYIIKKKEF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ L +SS    PRPETE+LV+  L              IL+LGTG+GA+ LAL  E+ 
Sbjct: 78  WSLSLFVSSYVLIPRPETEILVEQVLLKV-----SSTKNSILELGTGSGAISLALASENS 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             K +G DIS  AL IAK NA    +      + S+WF ++    F +IV NPPY+    
Sbjct: 133 QLKIIGTDISLYALLIAKYNADKLNL-NNVKFIYSNWFQNIPIKKFHIIVCNPPYLSRKD 191

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                  +  F+P  +L  G  G+     I     ++    G   +E  Y Q   V  IF
Sbjct: 192 FKNSCSNI-SFEPYSALVSGNSGIECIEYIIKNSFQYFVSSGWLYIEHCYKQTKLVHNIF 250

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
           ++     + + KDY   +R+ 
Sbjct: 251 KNNFFINIVSVKDYSNRNRIT 271


>gi|40062806|gb|AAR37690.1| modification methylase, HemK family [uncultured marine bacterium
           440]
          Length = 279

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 135/260 (51%), Gaps = 5/260 (1%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  + G+    +I + +  + ++       AI R +K E +  I+G ++F++  
Sbjct: 24  LDAQIILSDIMGMKREFLITNNEINISEKVMKKYDIAIKRRIKREPVAYIIGKKEFWSQD 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +++ T  PRPE+ELL+     + L    +   + ILD+GTG+G + L+LLKE P  +G
Sbjct: 84  FRVNNSTLIPRPESELLI-----YKLVSYFENRRINILDIGTGSGCILLSLLKELPLTRG 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G+DIS KA++ AKSN+    +  R      D  +   G +D+IV+NPPYI    +  L 
Sbjct: 139 IGIDISAKAVKTAKSNSKKLNLFFRSKFKVVDIDNFNIGRYDLIVANPPYIALKDMKNLS 198

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++ +++P I+L GG DGL   + +       L  +GL  +E+G NQ V   +I +    
Sbjct: 199 KDILNYEPLIALKGGYDGLDLIKKVIYKSKHLLKANGLLGIEVGTNQYVQASKILKKNGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V+   D   N R ++  +
Sbjct: 259 REVSKEYDCNYNVRCIISTK 278


>gi|56460001|ref|YP_155282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Idiomarina loihiensis L2TR]
 gi|56179011|gb|AAV81733.1| Modification methylase, HemK family [Idiomarina loihiensis L2TR]
          Length = 309

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 110/261 (42%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++ + L  V  L++ Q+       + + ++      + + + +H     +     F  + 
Sbjct: 44  ETRALLSFVLQLTTAQLAAMGHCRMLNSEKQEFVELLKQRVEQHIPAAYLTHQAWFAGLP 103

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L+++     L         R+LDL TG G + +A     P  + 
Sbjct: 104 FYVDERVLVPRSPIAELIENGFQTWLVEAPH----RVLDLCTGGGCIAIACAYAFPEAEV 159

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
             +DIS +ALE+A+ N   +G++ R   +QSD F +V+   +D+IV+NPPY+++  +  L
Sbjct: 160 DALDISTEALEVAEFNIEQHGLTHRVTPIQSDLFDAVKAEKYDLIVTNPPYVDAEDMTDL 219

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E    +P + L  G DGL     +    S  LN  GL   E+G N    +   +    
Sbjct: 220 PPEY-HHEPELGLAAGEDGLILVDKMLMQASDLLNDGGLFVCEVG-NSMPALAEKYPKTP 277

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +       G D V L  +
Sbjct: 278 FMWLEFA---NGGDGVFLLTK 295


>gi|332216070|ref|XP_003257165.1| PREDICTED: hemK methyltransferase family member 1 isoform 1
           [Nomascus leucogenys]
 gi|332216072|ref|XP_003257166.1| PREDICTED: hemK methyltransferase family member 1 isoform 2
           [Nomascus leucogenys]
 gi|332216074|ref|XP_003257167.1| PREDICTED: hemK methyltransferase family member 1 isoform 3
           [Nomascus leucogenys]
          Length = 338

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 76/278 (27%), Positives = 117/278 (42%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTSQQLQCIQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D++V
Sbjct: 178 LSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTYLPWGPVDLVV 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+    ++ L  E+R ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 RHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRR 335


>gi|281411709|ref|YP_003345788.1| modification methylase, HemK family [Thermotoga naphthophila
           RKU-10]
 gi|281372812|gb|ADA66374.1| modification methylase, HemK family [Thermotoga naphthophila
           RKU-10]
          Length = 282

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 20/266 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             + ++     +V G+    V+   D ++ ++++  +   + +      +H ILG ++F 
Sbjct: 31  NPVLEAILIAAKVLGVRKEDVVT-KDIIVSEKEKSIIKELVEKRANGYPLHYILGEKEFM 89

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +    F PRPETE LV+ AL      I++  +  + D+GTG+GA+ +++ K    
Sbjct: 90  GLSFFVEEGVFIPRPETEELVEMALDL----IKRYGLRVVADVGTGSGAIGVSIAK-FSG 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESV 178
                 DIS KA+E++  NA  +GV +RF   +  +    E      ++I+SNPPY++  
Sbjct: 145 AIVFATDISEKAVEVSLKNAKRHGVLDRFVVKRGRFLEPFEKDYEKIEMILSNPPYVKMS 204

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L  +V  F+P  +L  G DGL  YR       R+  +  +  +EIG +Q  ++ +I
Sbjct: 205 --ARLPQDVL-FEPSEALFAGEDGLDFYREFFR---RYSTEGKIVLMEIGEDQVEELKKI 258

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                       KD  G  R L   R
Sbjct: 259 VPGAAF-----LKDTSGRYRFLHINR 279


>gi|223039659|ref|ZP_03609945.1| modification methylase HemK [Campylobacter rectus RM3267]
 gi|222879042|gb|EEF14137.1| modification methylase HemK [Campylobacter rectus RM3267]
          Length = 282

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R + + L R  G+    + ++ +  L+D + +F      R   HE +  I G   FY
Sbjct: 24  NPARVAKALLMRQLGVKIEWIFLNLNRELEDSEGYF--ALAKRFANHEPLEYITGEVGFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PRPETE+LV+ +L        + +   + ++G G+G + + L   S  
Sbjct: 82  GLSFNVKKGVLIPRPETEILVEKSLEVLSNLPARNEPPLVAEIGVGSGIISICLALNS-S 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K +  DIS  AL +A+ NA   GV +R + ++  +   + G FD++VSNPPYI      
Sbjct: 141 AKIIASDISDDALNLARENAAKFGVEDRIEFVKCAYLDQIYGRFDLLVSNPPYIAQDY-- 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V + +P  +L GG  G    + I         K    + E+GY+QK  +  + E 
Sbjct: 199 ELDKFVLN-EPHEALFGGAAGDEILKNIIFVAKNRGVK--YLACEMGYDQKASLESVLEL 255

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                   ++D  G DR  +  
Sbjct: 256 SGF-EAEFYRDLAGFDRGFVAR 276


>gi|42518856|ref|NP_964786.1| hypothetical protein LJ0931 [Lactobacillus johnsonii NCC 533]
 gi|41583142|gb|AAS08752.1| hypothetical protein LJ_0931 [Lactobacillus johnsonii NCC 533]
 gi|329667597|gb|AEB93545.1| hypothetical protein LJP_1223c [Lactobacillus johnsonii DPC 6026]
          Length = 280

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  +  +  +  L   Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DIDYVLGERLGYTPSEFELHINDELTPEQEKQALKDMKKLRRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----- 120
            ++     PR ETE LV  AL             +ILDLGTG+GA+ +AL+K++      
Sbjct: 83  LVNRGVLIPRFETEELVKWALENI------ESGKKILDLGTGSGAIMVALVKQAQKQGIQ 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +   +     T +++    +E  FD+I+SNPPYI++   
Sbjct: 137 NLNLYASDITDSALRESEENFLKYDLD--VKTRKANVLVGLE-KFDMIISNPPYIKTSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +   V   +P  +L GG DGL  YR  A  V  HLN  G   +E G+++K  +  +FE
Sbjct: 194 NLMDKNVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQFFLEFGFSEKEQLKELFE 253

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFC 263
                F +    D  G  R++   
Sbjct: 254 TELPDFEIEFKDDLAGKPRMVHGR 277


>gi|227889714|ref|ZP_04007519.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227849578|gb|EEJ59664.1| possible N5-glutamine S-adenosyl-L-methionine-dependent
           methyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 287

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 117/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  +  +  +  L   Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DIDYVLGERLGYTPSEFELHINDELTPEQEKQALKDMKKLRRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP----- 120
            ++     PR ETE LV  AL             +ILDLGTG+GA+ +AL+K++      
Sbjct: 83  LVNRGVLIPRFETEELVKWALENI------ESGKKILDLGTGSGAIMVALVKQAQKQGIQ 136

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +   +     T +++    +E  FD+I+SNPPYI+    
Sbjct: 137 NLNLYASDITDSALRESEENFLKYDLD--VKTRKANVLVGLE-KFDMIISNPPYIKMSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +   V   +P  +L GG DGL  YR  A  V  HLN  G   +E G+++K  +  +FE
Sbjct: 194 NLMDENVIKNEPDTALYGGEDGLDFYRKFAKQVQSHLNPQGQFFLEFGFSEKEQLKELFE 253

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFC 263
                F +    D  G  R++   
Sbjct: 254 TELPDFEIEFRDDLAGKPRMVHGR 277


>gi|30248453|ref|NP_840523.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosomonas europaea ATCC 19718]
 gi|30138339|emb|CAD84347.1| adenine specific methylase, HemK family [Nitrosomonas europaea ATCC
           19718]
          Length = 312

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFY 61
           A  ++   +     LS+ Q+    D+ L   +R  +   I R +  +  +  +       
Sbjct: 51  AYDEAAYLILHTLHLSADQLEPFMDATLTRNERDQILRIIERRVNEKIPVAYLAHEAWLG 110

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +      PR     L+   LA  +  ++  D+   LDL TG+G + + L      
Sbjct: 111 DFNFYVDERVLIPRSFIAELLQDHLAPWV--MDPYDIGTALDLCTGSGCLAILLAHAFEQ 168

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VDIS  AL++A  N     +  R   +QSD F+ ++G  +D+I+SNPPY+ +  +
Sbjct: 169 AQIDAVDISSDALDVASINVRNYDLINRVGLIQSDLFAELQGKRYDLIISNPPYVNAASM 228

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E    +P ++L GG DGL   R I    + HL +DGL  +EIG+NQ   V R F 
Sbjct: 229 AMLPEEY-HHEPSVALAGGSDGLDIIRRIFKEAAHHLTEDGLLIMEIGHNQAE-VERAFP 286

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +       G D+ +L  R
Sbjct: 287 QLPCTWLET---SSG-DQFVLMVR 306


>gi|42519929|ref|NP_965844.1| HemK family modification methylase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42409666|gb|AAS13778.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 279

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 6/260 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +  V G+    +IV+    +   +         +  +   I +I+G R+F++  
Sbjct: 25  LDCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERYPISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E ++ + L +      K+  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETIILAVLKY---YPNKKQKLKIADFGTGTGCLLISVLSEYEYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S +A ++A  N   + +  R     S W +   G FD+I+SNPPYI+   +  L 
Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSW-TECRGSFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +PRI+LDGGIDGLS Y +I   + + L K+G   +EIG +Q  ++ +I  S +L
Sbjct: 201 AEVQK-EPRIALDGGIDGLSCYLSIFPILRKCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R ++  R
Sbjct: 259 AFQEYVYDLAGMKRCIVVKR 278


>gi|323343507|ref|ZP_08083734.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
           33269]
 gi|323095326|gb|EFZ37900.1| protein-(glutamine-N5) methyltransferase [Prevotella oralis ATCC
           33269]
          Length = 276

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 109/266 (40%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    GLS   VI    + L       L   I R  K E +  ++G  +F 
Sbjct: 18  EAKAIVRMLLEMQFGLSWADVICGKVTQLGAENALLLQQMIGRLAKGEPVQYVMGRAEFA 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N   +++     PRPET  L            E  +   +LD+G G+G + + L      
Sbjct: 78  NRIFSVTQGVLIPRPETAELCAWITH------ETPEDATVLDVGCGSGCIAVTLALNIHG 131

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVI 179
              V  DIS +AL IA+SNA    +  R D ++ D          +DV+VSNPPYI    
Sbjct: 132 AHVVAWDISDEALHIAESNAQA--LHARVDIVRQDALIPPADVEKWDVVVSNPPYICERE 189

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V D++P  +L     D L  YR IA+  ++ L + G    E+      +V R+
Sbjct: 190 RGAMARNVLDYEPDTALFVPDNDPLLFYRAIAEYAAKALKRGGTLYFELNPLHADEVKRM 249

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
              +    + +  D  G +R +   R
Sbjct: 250 LYEQHFAAIESRHDMFGKERFIKAIR 275


>gi|328954787|ref|YP_004372120.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coriobacterium glomerans PW2]
 gi|328455111|gb|AEB06305.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Coriobacterium glomerans PW2]
          Length = 337

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 85/296 (28%), Positives = 120/296 (40%), Gaps = 40/296 (13%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L   TGL+  ++ +  D  L   +   +   + R    E +  I     F  + + 
Sbjct: 31  AEWLLSAATGLARIELYMSFDRPLGASELDVMHRFVARRSTGEPLQYITEQAMFRTIAIA 90

Query: 67  LSSDTFEPRPETELLVDSALAFS----------------LPRIE---------------- 94
                  PRPETE+LV   LAF                 LP  +                
Sbjct: 91  CEPGVLIPRPETEVLVGEVLAFLDHERAPEVLAHRERVELPWNDEVGSSTDEQGMPNPSQ 150

Query: 95  --KRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSER-F 150
              RD  RIL++G GTG + LA+  E P   K V  DI   A+ +A+ N V  G+ E   
Sbjct: 151 TVPRDAARILEIGCGTGCISLAIASERPGQVKIVATDIDPSAVALAQRNRVALGLDEETI 210

Query: 151 DTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              + D    V       FDV+VSNPPYI   ++  L  EV  F+P ++LDGG DGL  Y
Sbjct: 211 SFREGDLAEPVAPDELAGFDVLVSNPPYIPRAVMADLPREVSAFEPELALDGGADGLQIY 270

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           R +    S  L   GL + E+      +   +     L  V+  +D  G  RVLL 
Sbjct: 271 RRLLRLASMALRPGGLLACELYEESLEEAAELARGADLVDVSIVEDLAGRPRVLLA 326


>gi|327480930|gb|AEA84240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas stutzeri DSM 4166]
          Length = 307

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 113/264 (42%), Gaps = 10/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  D+   +     L         D  L+  +   L N + R ++       +LG   F
Sbjct: 35  NAWDDARQLVLGALHLPWEMSDSYLDCRLEADECEHLQNLLRRRIEERVPTAYLLGQAWF 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      LP   K    RILDL TG+G + +A   E  
Sbjct: 95  CGLPFIVDERVLIPRSPIGELIEHRFEPWLPGTPK----RILDLCTGSGCIGIACAYEFL 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             + V  DIS  ALE+A  N   +G+ ER  T+QSD F  +    FD+IVSNPPY+++  
Sbjct: 151 EAEVVLADISFDALEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNPPYVDAED 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL  DG+  VE+G +Q V V  ++
Sbjct: 211 FADMPDEF-HHEPELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVGNSQ-VHVQALY 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  +   +  GG+   LL  
Sbjct: 269 PEVDFTWLEFTR--GGHGVFLLAA 290


>gi|282877096|ref|ZP_06285938.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccalis ATCC 35310]
 gi|281300778|gb|EFA93105.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella buccalis ATCC 35310]
          Length = 287

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 3/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A     + L    GL+   ++    + L   +   L   + R  + E +  +LG  +F 
Sbjct: 19  EAKAVVRTVLEVRFGLTLTDILCGKVNDLSAEEGRSLEKIMQRLRQAEPVQYVLGEAEFA 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +      PRPETE L    ++   P     +   ILD+GTG+G + + L  + P 
Sbjct: 79  GRRFKVVPGVLIPRPETEELCAWIVSEQKPT--DGNPTTILDIGTGSGCLAVTLSLDIPG 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS  AL IA  NA    V   F    +         +D+I SNPPYI      
Sbjct: 137 AAVSAWDISQDALLIANENAKAWKVPVSFALQDALAAPKDSMKWDIIASNPPYICPSEAA 196

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V  F+P  +L     D L  Y+ IA+     L  DG   VEI    +  +  + +
Sbjct: 197 EMAQNVLKFEPSTALFVPQSDPLLFYKAIANYAIEALIPDGKLYVEINPLYRNQLEEMLK 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     +   KD  G DR+    R
Sbjct: 257 NVGFIDIEIRKDAFGKDRMARATR 280


>gi|113475328|ref|YP_721389.1| HemK family modification methylase [Trichodesmium erythraeum
           IMS101]
 gi|110166376|gb|ABG50916.1| modification methylase, HemK family [Trichodesmium erythraeum
           IMS101]
          Length = 301

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 10/263 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLD----DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNV 63
            FL     L+   + ++          +     L +   R L+    +  + G   + N 
Sbjct: 37  LFLEEFASLNRLTLRLESFKDWPNVSMELSLVELDSLWRRRLEDRVPLQYLTGVTYWRNF 96

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L + S    PRPETELL+D  L  +   +E      + D+GTG+GA+   L        
Sbjct: 97  SLRVGSGVLIPRPETELLIDLVLVATNSVLELGHGNWV-DMGTGSGAIACGLADILTDAS 155

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
             G+D S  AL IA+ NAV+ G  +R +  +  W+  +E   G    +V+NPPYI S +V
Sbjct: 156 IYGIDCSPVALAIARQNAVSLGYGDRINFYEGSWWQPLEHLRGQVSGMVANPPYIPSDMV 215

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR  +P ++LDGG+DGL   R + +    +L   G+  VE+   Q  +V +I  
Sbjct: 216 STLEPEVRKHEPHLALDGGVDGLDCIRFLVETAPLYLVSGGVWLVEMMAGQSEEVAKILY 275

Query: 241 SRK-LFLVNAFKDYGGNDRVLLF 262
                  V  F D  G DR  + 
Sbjct: 276 DHGSYCQVEIFGDLEGVDRFAMA 298


>gi|289663510|ref|ZP_06485091.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 281

 Score =  223 bits (568), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 7/260 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + L    G     + +     +          ++ R    E +  + G R F+ + L
Sbjct: 25  DAEALLLHALGRDRAWLFMHGRDAVPLSVAQAFEASVQRREAGEPVAYLTGSRGFWTLDL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S  T  PR +TELLV+ AL     R + R   R  DLGTG+GA+ LA+  E P  + +
Sbjct: 85  AVSPATLIPRADTELLVELALE----RFDTRPGRRAADLGTGSGAIALAISSERPQAQVI 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D S  AL +A+ NA  + +    D     WF  + G  FD+I SNPPYI +       
Sbjct: 141 ATDASAAALAMARRNAHKHDLR-NVDFRLGHWFGPLAGEAFDLIASNPPYIAAHDPHLQQ 199

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            ++R ++P  +L  G DGL   R I      HL   G   +E G++Q   V  +  +   
Sbjct: 200 GDLR-YEPASALASGSDGLDDIRLIVADAPAHLLPSGWLLLEHGWDQGAVVRALLAAAGF 258

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V  ++D    DRV L  +
Sbjct: 259 DTVATYRDLEARDRVTLGRK 278


>gi|282857118|ref|ZP_06266364.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pyramidobacter piscolens W5455]
 gi|282585053|gb|EFB90375.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pyramidobacter piscolens W5455]
          Length = 286

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 116/259 (44%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L    G     V       +         +A  R  K E +  ILG  DF  
Sbjct: 25  PRLEAELILAHCAGKDRAWVHSRLPDAVPASVAEAALSACARRKKREPLQYILGCCDFDG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L + +    PRPETELLV+ A        E  D    LD GTGTG + +ALL   P  
Sbjct: 85  LSLLVEAGCLVPRPETELLVECA-------AENFDGGAFLDWGTGTGCIAVALLNRFPAA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           + + V+ +  +L  A+ N    G S R   + S+    +      ++VSNPPY+ S  ++
Sbjct: 138 RALMVEKNPASLNCARRNLEKFGFSPRARLIASETPEDIPACEVSLVVSNPPYVPSGEIE 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV  ++PR++LDGG DGL  YR + +  +R L + G   VE G   + + +R    
Sbjct: 198 RLMPEVSQYEPRLALDGGPDGLEPYRRLFELCARVLRRGGFFCVEYGGGAQTEALRALAP 257

Query: 242 RKLFLVNAFKDYGGNDRVL 260
           +        +D  G DRV+
Sbjct: 258 KAFRETVLLRDIAGCDRVI 276


>gi|152990781|ref|YP_001356503.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2]
 gi|151422642|dbj|BAF70146.1| protoporphyrinogen oxidase [Nitratiruptor sp. SB155-2]
          Length = 274

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 114/264 (43%), Gaps = 17/264 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L ++   L      S   +   P+  +D +        + R L +E I  I+    FY
Sbjct: 20  RPLLEAEILLAYAIKKSRVYLHAHPEEKIDAK---PFFELVKRRLAYEPIEYIIQRVSFY 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                + +    PRPETE+L+D          E R    + ++G G+G +   L  + P 
Sbjct: 77  GEEFFIQNGVLIPRPETEILIDEV------SKELRGDESLAEIGVGSGVISAILKMKFPS 130

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    DIS KA+  A+ N    G+    + +Q+D    VE   DVIVSNPPYI      
Sbjct: 131 LQITATDISDKAIACARKNFQKFGLD--IELVQTDLLDGVEKKIDVIVSNPPYIAKGF-- 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFE 240
            L   V  ++P  +L GG +G    + I D     L     + + E+G++QK  +    +
Sbjct: 187 ELEPNVAKYEPHEALFGGREGDEILKKIIDL---FLQSSAKILACEMGFDQKNAIRDYVK 243

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           SRK   V  FKD  G DR  +  R
Sbjct: 244 SRKDIDVRFFKDLAGLDRGFIIQR 267


>gi|78778709|ref|YP_396821.1| HemK family modification methylase [Prochlorococcus marinus str.
           MIT 9312]
 gi|78712208|gb|ABB49385.1| modification methylase, HemK family [Prochlorococcus marinus str.
           MIT 9312]
          Length = 289

 Score =  222 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 6/221 (2%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +K   I  +     + +++L +++    PRPETEL+VD        +  K   +   +LG
Sbjct: 70  VKCYPIQYLCETTYWRDLKLKVTNKVLIPRPETELIVDIVFNIFGKQSRK---LFFAELG 126

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162
           TG+GA+ +AL    P   G+  DI   ALEIA +N + +            W++ +E   
Sbjct: 127 TGSGAISIALALAYPLCNGIATDIDQDALEIAINNYMNSSKQSNLKFYCGHWWTPLESFK 186

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G  D+ +SNPPYI     + L  EV++F+PRI+L GG DGL H R I       L + G 
Sbjct: 187 GKLDLAISNPPYIPKDTYEKLPKEVKNFEPRIALLGGEDGLQHIREIIQKAPIFLKEKGW 246

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             +E  ++Q   V ++F   K   +    D  G  R  +  
Sbjct: 247 LILENHFDQGEKVKQLFIKNKFTSIEIVNDLSGIGRFTIGR 287


>gi|297671241|ref|XP_002813754.1| PREDICTED: hemK methyltransferase family member 1-like [Pongo
           abelii]
          Length = 338

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTSQQLQCIQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D++V
Sbjct: 178 LSQLPQSRVIAVDKGEAAISLTHENAQRLRLQDRIWIIHLDMTSERSWTHLPWGPVDLVV 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+    ++ L  E+R ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                +    +SR    L LV   +D+ G  R L   R
Sbjct: 298 RHPELISSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRR 335


>gi|317014457|gb|ADU81893.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Helicobacter pylori Gambia94/24]
          Length = 276

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L   +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHAHAYLELTHEEEARFFELVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + ER    Q+  +  +    +++VSNPPYI       L 
Sbjct: 139 YASDISPNALEVALKNIERFNLKERVFLKQTRLWDHMP-TIEMLVSNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +           E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAGLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|94496667|ref|ZP_01303243.1| protein chain release factors methylase subunit [Sphingomonas sp.
           SKA58]
 gi|94424027|gb|EAT09052.1| protein chain release factors methylase subunit [Sphingomonas sp.
           SKA58]
          Length = 244

 Score =  222 bits (567), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 11/254 (4%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           +    GL   ++++      D          I R    E +  I+G RDF+ + L ++ D
Sbjct: 1   MAHALGLPRGEMLMRQR---DLGVPSDFAALIARRAAGEPVAHIIGMRDFWTITLAVTPD 57

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PRP++E L+++A+ +       +    +LDLGTG+GA+ LA L + P  +G+G+D S
Sbjct: 58  TLIPRPDSETLIEAAVDY----FGAQGPQTVLDLGTGSGALLLAALAQWPQARGLGIDAS 113

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             AL +A+ NA    +  R +    DW + VEG+FD+++ NPPYI   + + L  +V   
Sbjct: 114 AGALLVARGNAARLDLDARAEFRAGDWATGVEGVFDLLLINPPYI--GVDEPLSGDVLR- 170

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P  +L  G+DGL  YR IA  + R +   G+ ++EIG+ Q   V  +  ++ L  V   
Sbjct: 171 EPASALFAGVDGLDDYRRIAPDLPRLIAPGGMAAIEIGHRQGDSVGALVAAQGL-NVAIR 229

Query: 251 KDYGGNDRVLLFCR 264
           +D  G DR ++  R
Sbjct: 230 RDLAGLDRCVIATR 243


>gi|237750574|ref|ZP_04581054.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879]
 gi|229373664|gb|EEO24055.1| protoporphyrinogen oxidase [Helicobacter bilis ATCC 43879]
          Length = 274

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 114/262 (43%), Gaps = 14/262 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  +  ++  ++  +    + D  +      +        +  +     FY++ L
Sbjct: 20  EAEILLGHILNMTRVELHTNAKKEITDFDKQRYFKILAMRKNGVPLEYLTNKASFYDLEL 79

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +    PR ETELLV+ AL      I+  ++   +++G G+GA+  A+L  +     +
Sbjct: 80  YVDNKVLIPRHETELLVEHALEI----IKAHNITHFVEVGVGSGAISAAILTHAKETCAI 135

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVD 181
             DIS +AL IAK N    G+  R D ++SD  SS    +     ++V+NPPYI +    
Sbjct: 136 ATDISKEALNIAKHNIQNLGLENRCDFVESDLLSSPYLIMRKPITLLVANPPYIANSYP- 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   +P I+L GG  G    + +         +      E+GY+QK  +  I  +
Sbjct: 195 -LNQEVLC-EPHIALFGGEKGDEILKKLILQARE--KQIQFLICEMGYDQKESMQEILLN 250

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                   +KDY G DR  +  
Sbjct: 251 VGYKP-TFYKDYAGFDRGFIAR 271


>gi|84494538|ref|ZP_00993657.1| putative methylase [Janibacter sp. HTCC2649]
 gi|84384031|gb|EAP99911.1| putative methylase [Janibacter sp. HTCC2649]
          Length = 285

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 113/267 (42%), Gaps = 10/267 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ +      G+ S +V      +L   +       +        +  + G   F  
Sbjct: 23  PEHDAVALAAHALGVDSSEV--RRRMILGGSEPEGYAALVAERASRVPLQHLTGRAWFRG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
           + L +    F PRPETE++   A+      +E       ++DL TG+GA+ LA+  E P 
Sbjct: 81  LELEVGPGVFVPRPETEVVAGWAIDAVTECVEVGVAEPVVIDLCTGSGAIALAIKSEVPD 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +   V++S  A+  A+ N    G+    + +  D  ++ E L   DV+VSNPPYI +  
Sbjct: 141 ARVHAVEVSDLAVAWAQRNRERLGLD--VEIVHGDAVTAFEELAEVDVVVSNPPYIPTT- 197

Query: 180 VDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            + +  EVRD DP ++L GG  DGL+  R +A   +  L   G+  +E   +Q   +   
Sbjct: 198 AEPIDPEVRDHDPHVALYGGSEDGLAIPRLVAGRAAELLRSGGVLVMEHADSQGESLPAA 257

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +      V    D  G  R  +  R
Sbjct: 258 LRATGSWSHVEDRLDLTGRPRATVAIR 284


>gi|195471784|ref|XP_002088182.1| GE18440 [Drosophila yakuba]
 gi|194174283|gb|EDW87894.1| GE18440 [Drosophila yakuba]
          Length = 315

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     ++V    D + L   Q       +        +  I+G  DF ++ L  S
Sbjct: 53  IVSHVLKQKFNKVPDSYDQLQLTPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 112

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ L++L   P  +   ++
Sbjct: 113 PSVFIPRPETEEFVRLVID----EYKNVKHVDLLEVGCGSGAMSLSMLHSLPQVQATAIE 168

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 169 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQ 228

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 229 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPLVKTIMNL 288

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  + ++ D    +R +
Sbjct: 289 KYEGRLKFIASYNDQYKRERFV 310


>gi|89093217|ref|ZP_01166167.1| Modification methylase HemK [Oceanospirillum sp. MED92]
 gi|89082513|gb|EAR61735.1| Modification methylase HemK [Oceanospirillum sp. MED92]
          Length = 309

 Score =  222 bits (566), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 10/252 (3%)

Query: 7   SHSFLCRV-TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +   L  V      +  ++D    LD++ +  L+    R+++ + +  I G   F  +  
Sbjct: 48  AQLVLAAVDLSWDVNPAVLDGRLTLDEKTKV-LSYIQQRAVERKPLPYITGESWFCQLPF 106

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L++   A  +P + +  V R+LDL TG+G + +A        +  
Sbjct: 107 YVDERVLIPRSPIAELIE---AEFVPWLREGPVERVLDLCTGSGCIGIACAYAFAEAEVD 163

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             DIS  A+++A  N   + ++ER   ++SD F +++G  +D+IVSNPPY+++  +  + 
Sbjct: 164 LADISKDAIDVAHMNIEKHEMAERVHAIESDLFCNLKGKKYDLIVSNPPYVDADDLASMP 223

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E  D +P ++L  G DGL   R I    + +L  DGL  VE+G N +V ++  F    +
Sbjct: 224 EEY-DHEPELALGSGPDGLDITRRILAEANDYLTDDGLLVVEVG-NSEVHMMEQFPELPI 281

Query: 245 FLVNAFKDYGGN 256
             +   +  GGN
Sbjct: 282 VWIEFQR--GGN 291


>gi|271963195|ref|YP_003337391.1| modification methylase,HemK family [Streptosporangium roseum DSM
           43021]
 gi|270506370|gb|ACZ84648.1| modification methylase,HemK family [Streptosporangium roseum DSM
           43021]
          Length = 284

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 108/263 (41%), Gaps = 13/263 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++    D+  D          + R    E +  I G   F  + L
Sbjct: 26  DAEEIAAYVHGVRRSELHNVTDADFD----ALFWEGVARREAREPLQHITGRAYFRYLSL 81

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++   A+           V  ++DLGTG+GA+ L++ +E       
Sbjct: 82  EVGPGVFVPRPETEVVAGWAIERLREMDVASPV--VVDLGTGSGAIALSIAQEIALATVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++   A   AK N + +G   R      D     S + G  D+++SNPPYI    +  
Sbjct: 140 AVEVDPDAYRWAKRNILEHG-QGRVHLHPEDLADALSELNGQVDLVISNPPYIPPGAIPR 198

Query: 183 LGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-E 240
              EVRD+DP  +L G G DGL   R +     R L   G  +VE    Q   V  IF E
Sbjct: 199 -DPEVRDYDPHRALYGSGSDGLDEVRAVERTARRLLRPGGFVAVEHADEQGTPVYLIFSE 257

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
                 V + +D    DR +   
Sbjct: 258 DNGWRDVRSRQDLTRRDRFVTAR 280


>gi|148238860|ref|YP_001224247.1| protoporphyrinogen oxidase [Synechococcus sp. WH 7803]
 gi|147847399|emb|CAK22950.1| Protoporphyrinogen oxidase [Synechococcus sp. WH 7803]
          Length = 299

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 5/223 (2%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDL 104
           +H  +  ++G   + +V L +S     PR ETELL+D AL    P   +         DL
Sbjct: 73  EHVPLQHLVGRCPWRDVELQVSPAALIPRQETELLIDLALQCLKPSESEALPQAGVWADL 132

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-- 162
           GTG+GA+ +AL +  P ++G  VD+S +ALE+A++N  +   S  +   Q  W+  +E  
Sbjct: 133 GTGSGALAVALARSLPGWEGHAVDLSAEALELARANLRSLAPSPCWTLHQGSWWEPLEPW 192

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G   ++VSNPPYI  V V  L   VRD +P ++L GG DGL   R +  G  R L   G
Sbjct: 193 WGTVHLVVSNPPYIPRVQVQGLEPVVRDHEPHLALSGGDDGLDCCRALISGAPRALAPGG 252

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              +E  ++Q   V+ +     L  V A  D  G  R  L  R
Sbjct: 253 WLLLEHHHDQSEAVLVLLRDAGLEAVQARPDLQGVMRFALARR 295


>gi|94984176|ref|YP_603540.1| HemK family modification methylase [Deinococcus geothermalis DSM
           11300]
 gi|94554457|gb|ABF44371.1| modification methylase, HemK family [Deinococcus geothermalis DSM
           11300]
          Length = 283

 Score =  222 bits (566), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 8/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + +     L    ++      + +     L N + R    E +  +LG  ++  VRL
Sbjct: 29  DARALVQHALNLGGVALLTRGTEPVAEADAARLVNLLRRRAAREPLQHLLGEVEWGGVRL 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                   PRPET    +  L  +L  ++     R+LD+GTGTGA+ L +    P     
Sbjct: 89  RTDRRALVPRPET----EWLLHLALETLQGVSAPRVLDVGTGTGALALGIKAARPDASVT 144

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+S  AL +A+ NAV NG+      L     + + G FD+IVSNPPY+ +   + +  
Sbjct: 145 ATDLSPDALTLARENAVLNGLD--VVFLAGRLLAGLSGPFDLIVSNPPYLPAADREQVDP 202

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR FDP ++L  G +GL   R +A      L    +  +E+              +   
Sbjct: 203 EVR-FDPDLALYAGPEGLDVARPLAVEAQAALAPGSVLLLELDPRNAAPFAAELREQGW- 260

Query: 246 LVNAFKDYGGNDRVLLFCR 264
            V    D  G +R +   R
Sbjct: 261 QVAVLPDLAGRERFVRANR 279


>gi|85375681|ref|YP_459743.1| protein chain release factor methylase subunit [Erythrobacter
           litoralis HTCC2594]
 gi|84788764|gb|ABC64946.1| protein chain release factor methylase subunit [Erythrobacter
           litoralis HTCC2594]
          Length = 283

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 84/266 (31%), Positives = 131/266 (49%), Gaps = 16/266 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G++   ++++      D       + + R L HE +  I G ++F+ 
Sbjct: 21  ARLDAEYLMAHAVGVTRSDLLLNHQ---GDAVPGEFADLVARRLHHEPLAYITGGQEFFG 77

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++ D   PR ++E +V++ALA      E  +  R+LDLGTG+GA+ + LL E P  
Sbjct: 78  RGFIVTPDVLIPRSDSEQVVEAALA------EMGEGARVLDLGTGSGALLVTLLAEHPDA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
            G G+D S  AL +A +NA  NGV++R   L++DW         G FD++++NPPY+   
Sbjct: 132 TGTGIDASLAALPVAAANAARNGVADRACLLKADWREPGWTDDLGQFDLVIANPPYV--E 189

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L   VR F+PR +L  G +GL  YR I   +S  L+ DG+  +EIGY Q   V  I
Sbjct: 190 DNAALDASVRKFEPRAALYSGPEGLDDYRAIIPQLSSLLSSDGVAVLEIGYRQADAVGTI 249

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            E           D     R L+  +
Sbjct: 250 AEENGFES-RLRHDLADRPRALILRK 274


>gi|23100452|ref|NP_693919.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
 gi|22778685|dbj|BAC14953.1| protoporphyrinogen oxidase [Oceanobacillus iheyensis HTE831]
          Length = 287

 Score =  221 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 14/269 (5%)

Query: 3   ALRD---SHSFLCRVTGLSSHQVIV-DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A R+   +   L     +S  Q+++   DS+ +        + +        +  +    
Sbjct: 19  AGREPKVAEILLLHHLQISKEQLLMKWRDSIQESSVEAIEKDILTHVETGVPVQHLTKEE 78

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            FY     ++     PRPETE LV   +  +         + I+D+GTG+G + + L  E
Sbjct: 79  HFYGRVFEVNQHVLIPRPETEELVQQVIQQAKTM---EQPITIVDVGTGSGVIAITLALE 135

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYI 175
            P  +    DIS KAL +AK NA    +      L+ ++      +    D+IVSNPPYI
Sbjct: 136 LPGSRVFATDISEKALAVAKRNAQA--MKADVTFLEGNFLEPFLDINQTADIIVSNPPYI 193

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKVD 234
                + L   V++FDP ++L    +GL+ Y  I   +    L+   + + EIG++Q   
Sbjct: 194 PWSQSEELQDTVKNFDPELALFAENNGLAAYHAILRQMKTMKLSDQSILAFEIGFDQSEA 253

Query: 235 VVRIFESR-KLFLVNAFKDYGGNDRVLLF 262
           +  +         V   KD    DR+LL 
Sbjct: 254 ITNMIRQNLPSREVFTVKDINDKDRILLA 282


>gi|260436445|ref|ZP_05790415.1| modification methylase, HemK family [Synechococcus sp. WH 8109]
 gi|260414319|gb|EEX07615.1| modification methylase, HemK family [Synechococcus sp. WH 8109]
          Length = 295

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 87/267 (32%), Positives = 126/267 (47%), Gaps = 12/267 (4%)

Query: 6   DSHSFLCRVTGL---SSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKH-ESIHRILGWRDF 60
           D    L    GL   S  ++++DP   +   Q    L+    R L     +  ++G   +
Sbjct: 28  DLDWLLDLAGGLRWASLQRLLLDPTRTVALEQSLEVLSELWERHLHGNVPLQHLVGLCPW 87

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V L  S     PR ETELLVD A+     + +     R  DLGTG+GA+ +AL +  P
Sbjct: 88  RDVLLESSPAALIPRQETELLVDLAM----SQFKTTPPARWADLGTGSGAIAVALARAWP 143

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
              G GVD+S  AL++A+ N                W+S +    G  D++VSNPPYI  
Sbjct: 144 TAPGHGVDLSPDALQLAEHNLQGCAPHHNCSLHLGSWWSPLKSWWGSLDLVVSNPPYIPC 203

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +VD L   VRD +P ++L GG DGL   RT+ DG    L+  G   +E  Y+Q V V++
Sbjct: 204 AVVDGLEAVVRDHEPHLALLGGADGLDAIRTVVDGAPTGLSPGGWLLLEHHYDQSVQVIQ 263

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +   L  V A  D  G  R  L  +
Sbjct: 264 LLQDAGLVEVRAAADLEGTLRFALARK 290


>gi|146307761|ref|YP_001188226.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina ymp]
 gi|145575962|gb|ABP85494.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudomonas mendocina ymp]
          Length = 306

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +   L   + R ++       +LG   F
Sbjct: 35  NAWDEARQLVLGALHLPWEISDAYLDCRLEDDEHLHLQGLLKRRIEERVPTAYLLGEAWF 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  LP+    +  R+LDL TG+G + +A   E P
Sbjct: 95  CGLPFRVDERVLVPRSPIAELIERHFAPWLPQ----EPARVLDLCTGSGCIGIACAYEFP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+ ER   +Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 151 EAEVVLADLSFEALEVANQNIERHGLEERVYCVQGDGFAGLPGQRFDLIVSNPPYVDAED 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 211 FADMPAEY-QHEPAMGLACGADGLDLVRRMLAEAADHLTERGLLIVEVGNSQ-VHVEALY 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +   +  GG+   LL  +
Sbjct: 269 PEVDFTWLEFER--GGHGVFLLAAK 291


>gi|281421475|ref|ZP_06252474.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM
           18205]
 gi|281404547|gb|EFB35227.1| protein-(glutamine-N5) methyltransferase [Prevotella copri DSM
           18205]
          Length = 306

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 16/270 (5%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     G++   +I    + L   +   L   I R  K E +  +LG  DF 
Sbjct: 33  EAQAIVRTVLDVKYGMTLTDIICGKVNELSADEERKLEEIIRRLQKGEPVQYVLGEADFA 92

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPR------IEKRDVVRILDLGTGTGAVCLAL 115
                +      PRPET  L +     +           + + +RILD+ TG+G + + L
Sbjct: 93  GRTFHVEPGVLIPRPETAELCEWIEKDATENKGITEGENEENAIRILDICTGSGCIAITL 152

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
             +    +  G DIS  AL+IA+ N      +        D     E    G +++IVSN
Sbjct: 153 GLDIGGSEVTGWDISEDALKIAQGNVALLD-AGNVKIEYQDALKLAETSDAGRWNIIVSN 211

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PPYI       +   V + +P I+L     + L  YR IA+  S  L   G    EI   
Sbjct: 212 PPYICEKEKADMEKNVLEHEPGIALFVPDEEPLKFYRAIAEYASSALKSGGALYFEINPI 271

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            + +   + E      ++  +D  G  R++
Sbjct: 272 YEKETREMLEGLGFKAIDTKEDAFGKQRMM 301


>gi|251771815|gb|EES52390.1| modification methylase, HemK family [Leptospirillum
           ferrodiazotrophum]
          Length = 308

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 115/268 (42%), Gaps = 8/268 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R++   +  +   S           L+        + I R    E  H I G   F 
Sbjct: 42  DPEREARLLMSALLS-SGTAPWTRSRERLEKELASRYEDWINRRAAREPHHLITGEITFC 100

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                L+     PRPETE LV+ AL  +    + R+ +RILDLG+G+G + L+ L E P 
Sbjct: 101 GHSFFLAPGVLIPRPETEQLVELALRHTAAS-KGREPLRILDLGSGSGVIALSFLLERPE 159

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            + V V+    AL     N   + + +R   ++ DW         FD I+SNPPYI +  
Sbjct: 160 ARAVAVEREPLALATLLENRRRHRLVDRLAVVRGDWEEMFGERPVFDCILSNPPYIPTDT 219

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV--VR 237
           +  L  EVR ++P  +LDGG DGL  YR I     R + + GL ++EIG +         
Sbjct: 220 IPALEPEVRAYEPASALDGGADGLDPYRKILPRAFRLIREGGLIALEIGDDMGDPTLFSA 279

Query: 238 IFESRKLF--LVNAFKDYGGNDRVLLFC 263
           +         L    +D  G  R++ + 
Sbjct: 280 MAGKTGGATPLPTIIRDISGRHRIVFWT 307


>gi|307189800|gb|EFN74072.1| HemK methyltransferase family member 1 [Camponotus floridanus]
          Length = 353

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 25/275 (9%)

Query: 8   HSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              +  V G      ++   ++ L+  Q   L +     L    +  I+G  DF ++ + 
Sbjct: 76  EHIVAHVIGTKKIIDILNVRNNRLNANQIEKLESMCECRLSRMPVQYIIGEWDFRDITVK 135

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    F PRPETE+LVD  L        + D   IL++G G+GA+ LAL       K   
Sbjct: 136 LVPPIFIPRPETEILVDFVLKRLNSL--QLDSCEILEIGCGSGAISLALAHACEKIKCTA 193

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEG---------LFDVIV 169
           +D S  A ++   N     ++ R   + +          F  + G         LFD +V
Sbjct: 194 IDTSPYACDLTIINRDKLNLANRVTVIHATLKSDATVEVFKELNGASDMDLNLRLFDFVV 253

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+ +  +  L  E+R ++   +LDGG DGL   + +    ++ L   G   +E+  
Sbjct: 254 SNPPYVPTKHISKLQPEIRIYEDLRALDGGDDGLKIIKPLLKYTAKVLKPGGRLFLEVDP 313

Query: 230 NQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
               + ++ F ++    KL   + +KD+  NDR +
Sbjct: 314 TH-PEYIQFFTNKYPDFKLHHEHTYKDFCNNDRFV 347


>gi|217970599|ref|YP_002355833.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thauera sp. MZ1T]
 gi|217507926|gb|ACK54937.1| modification methylase, HemK family [Thauera sp. MZ1T]
          Length = 317

 Score =  221 bits (565), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 121/261 (46%), Gaps = 9/261 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++   +     L   ++    D+ +   +R  L  AI + + +      ILG     + R
Sbjct: 61  EAVWLILGSLALPLDRLEPFMDACIPSEERIGLLEAIEQRVDERVPTAYILGEAWLGDFR 120

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            T+      PR     L++   A  +   +   V  +LD+ TG+G + + +    P    
Sbjct: 121 FTVDPRVIVPRSFFAELLEDGFAPWVE--DPEAVGSVLDMCTGSGCLAILMAHAFPNAHV 178

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
             VD+S  AL++A+ N    G+ +R + +  D F  +EG  FD+I+SNPPY+ +  ++ L
Sbjct: 179 SAVDLSEDALDVARINVADYGLEDRIELVHGDVFEGLEGRRFDLILSNPPYVTAEAMEAL 238

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E    +P+++L  G DGL   R +    + HLN +G+ +VE+G+N+ + V   F    
Sbjct: 239 PPEYL-HEPQMALASGEDGLDVVRRLLAEAAEHLNPEGILAVEVGHNRAI-VEAAFPDLP 296

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +      GG+D V +  R
Sbjct: 297 FEWLPTR---GGDDMVFVLRR 314


>gi|307564990|ref|ZP_07627507.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella amnii CRIS 21A-A]
 gi|307346303|gb|EFN91623.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella amnii CRIS 21A-A]
          Length = 286

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 104/267 (38%), Gaps = 8/267 (2%)

Query: 5   RDS----HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           R++       L     LS   +++   + L   Q   L   I R    E +  +LG   F
Sbjct: 17  REAQAIIRLILEEEFNLSFADILIGKVNELSQEQLLKLEELIRRIESFEPVQYVLGKETF 76

Query: 61  YNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
                 + S    PRPETE+LV+        +   +   + ++ILD+GTG+G + + L  
Sbjct: 77  LGRSFHVRSGVLIPRPETEVLVEWVKEDCCTTACNLLDSNNIKILDIGTGSGCIAITLSL 136

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           + P       DIS +AL IAK NA        F        +  E  ++VI+SNPPYI  
Sbjct: 137 DIPHSNVTAWDISKEALLIAKENASALKGKVNFRLQDVFNVNVSERKWNVIISNPPYICC 196

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                +   V   +P I+L     D L  YR IA+     L K G    E       D+ 
Sbjct: 197 KEHTSMSDNVLKHEPHIALFVPDDDPLRFYRAIANIGKSALIKGGSLYFETNPLYINDIK 256

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFC 263
            + E     ++    D     R +   
Sbjct: 257 NMLEDIGYTMIQYRNDQFDKQRFIKAT 283


>gi|66547731|ref|XP_393324.2| PREDICTED: hemK methyltransferase family member 1-like isoform 1
           [Apis mellifera]
          Length = 349

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 26/276 (9%)

Query: 8   HSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              +  V G +    +VD  +  L   QR  L +     L    I  I+G  DF ++ L 
Sbjct: 72  EHIVAHVIGTNKILDLVDIKNERLTSVQRDTLDSLCECRLSRMPIQYIIGEWDFCDITLK 131

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    F PRPETE+LV   L         +    IL++G G+GA+ LA+   +     + 
Sbjct: 132 LVPPIFIPRPETEILVHYILKALKSSDNNKQ--EILEIGCGSGAISLAIAHANKTVHCIA 189

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------------------VEGLFDVI 168
           +D + +A E+ K N     + +R   + +    +                     +FD I
Sbjct: 190 IDSNPEACELTKKNRDKLNLKDRISVVHATLKDNGSIEISNESKNESKNLDLNSKIFDFI 249

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI +  +  L  E++ ++   + DGG DGL   + +    +  L   G   +E+ 
Sbjct: 250 VSNPPYIPTKQISTLIPEIKIYEDLTAFDGGDDGLKVIKPLLKYAAIALKPGGRLFLEVD 309

Query: 229 YNQKVDVVRIFESR----KLFLVNAFKDYGGNDRVL 260
                + ++ F  +    KL   + +KD+  NDR +
Sbjct: 310 TTH-PEYIQFFTKKYPILKLQYEHTYKDFCNNDRFI 344


>gi|305681978|ref|ZP_07404782.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium matruchotii ATCC 14266]
 gi|305658451|gb|EFM47954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium matruchotii ATCC 14266]
          Length = 279

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 99/261 (37%), Gaps = 8/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+H+    + G     V +   + L           I R    E +  ILG   F  
Sbjct: 20  PRHDAHTLAAHLIGTDPLTVRLMSPTDLPATFHHDYAELISRRAHREPLQHILGTAPFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+    F PRPETE L D         +       I+DL TG+GA+   L    P  
Sbjct: 80  LTLTVGPGVFIPRPETEQLADWV----ATHLGNTPNPLIIDLCTGSGAIADYLAHARPDA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               V++S +AL    +N    GV+    D         + G    +V+NPPY+      
Sbjct: 136 NIYAVELSPEALTYTHTNLDPLGVTIIAGDATNPTLLEHLNGKATAVVTNPPYVPHTT-- 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP +++ GG  G+     +     R L   G+ + E       DVV++   
Sbjct: 194 DLQPEVYA-DPPMAVFGGDTGMDVITRLIPTARRLLAPGGVFACEHDDTTGPDVVKLVAE 252

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L  V   +D+ G  R +  
Sbjct: 253 AGLRQVTQHQDWAGQPRFVTA 273


>gi|257060964|ref|YP_003138852.1| modification methylase, HemK family [Cyanothece sp. PCC 8802]
 gi|256591130|gb|ACV02017.1| modification methylase, HemK family [Cyanothece sp. PCC 8802]
          Length = 300

 Score =  221 bits (564), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 10/268 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDP---DSVLDDR-QRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++    L  V  L +  + ++     S +  +     LT      LK    +  ++G   
Sbjct: 30  QEVDWLLQDVAQLDALSLRLESFEGRSPIPLKFSLSDLTQLWENRLKDRVPVQYLVGVTP 89

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKE 118
           + N  L +S     PRPETEL++D A+            +   +DLGTG+GA+   L + 
Sbjct: 90  WRNFSLKVSPSVLIPRPETELIIDFAVKAVKDSPRNDLALGHWVDLGTGSGAIACGLAQA 149

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYI 175
            P      VD S  AL IA+ NA   G S R +  Q  W++ +E   G    ++SNPPYI
Sbjct: 150 FPKAIIHAVDSSEAALVIAQENANNLGFSSRINFYQGSWWTPLESLKGKISGVLSNPPYI 209

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            + ++  L  EVRD +P ++LDGG DGL   R + +    +L   G+  VE+   Q   V
Sbjct: 210 PTKMLSELAPEVRDHEPYLALDGGEDGLDSLRYLINSSPDYLYSGGIWLVEMMAGQGEKV 269

Query: 236 VRIFE-SRKLFLVNAFKDYGGNDRVLLF 262
            ++   S     +    D    DR  L 
Sbjct: 270 AQLLTDSTAYKDIKILSDLAEIDRFALA 297


>gi|254440594|ref|ZP_05054088.1| methyltransferase, HemK family [Octadecabacter antarcticus 307]
 gi|198256040|gb|EDY80354.1| methyltransferase, HemK family [Octadecabacter antarcticus 307]
          Length = 272

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 93/263 (35%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             +R++          +  +   D  + +   Q       + R    E +  + G RDFY
Sbjct: 21  NPVREARMLWEA----TFPKRYGDYAAAMVGGQVSHFKALVARRAAREPMSHLTGGRDFY 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +  D  +PRP+TE LV +AL         R   R+LDLGTG+G V L+LL   P 
Sbjct: 77  EHRFEVGPDVLDPRPDTESLVIAALE--------RPFDRVLDLGTGSGCVLLSLLAARPD 128

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +GVG D+S  AL +A  NA    +  R D + SDW++S+ G FD+IVSNPPY+    + 
Sbjct: 129 ARGVGSDVSAAALVVAARNAAKLEIDHRVDLIVSDWYASIYGQFDLIVSNPPYLALAEMA 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E   ++PRI+L  G DGL  YR I  G   HL   G   VEIG +Q   VV +F +
Sbjct: 189 SLAPE-LSYEPRIALTDGGDGLGCYRVITAGAGEHLTAGGWLMVEIGPSQGAAVVAMFGA 247

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             L  V    D    DRV+L  +
Sbjct: 248 AGLVCVQIRHDLDARDRVVLGQK 270


>gi|15645009|ref|NP_207179.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695]
 gi|2313486|gb|AAD07450.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 26695]
          Length = 276

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L +  I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELVEKRLNNCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + ER    Q+  +  +  + +++VSNPPYI       L 
Sbjct: 139 YASDISPNALEVASKNIEHFCLKERVFLKQTRLWDHMP-MIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|284046082|ref|YP_003396422.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Conexibacter woesei DSM 14684]
 gi|283950303|gb|ADB53047.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Conexibacter woesei DSM 14684]
          Length = 320

 Score =  221 bits (564), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 120/263 (45%), Gaps = 12/263 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L    G +   + + P+ VL   +      ++ R    E +  I G R F 
Sbjct: 70  NPRLDAELLLADALGATRTSLHLHPERVLVADESARFAASVARRRAREPVAYIRGTRGFR 129

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ LT+ +    PRPETELLV+ AL             R+ D+GTG+GAV LAL  E P 
Sbjct: 130 HIDLTVDARVLVPRPETELLVEVALGL-------PRGARVADVGTGSGAVALALKHERPD 182

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V  D+S  AL +A++NA    ++      Q D  + V+G  D I+SNPPY+     +
Sbjct: 183 LAVVATDLSADALAVAQANAAALRLA--VAFAQGDLLAGVDGPLDAILSNPPYVPDGDRE 240

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   +P  +L  G DGL   R +A   +         + E+G  Q   V  +  +
Sbjct: 241 GLEPEVAVHEPSQALFAGGDGLDVLRRLATEAAAR-AP--FVAFEVGAGQAPAVGALLRA 297

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
             +  + A +D  G +RV++  R
Sbjct: 298 AGMLRITAHRDLAGIERVVVGER 320


>gi|319956158|ref|YP_004167421.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Nitratifractor salsuginis DSM 16511]
 gi|319418562|gb|ADV45672.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nitratifractor salsuginis DSM 16511]
          Length = 270

 Score =  221 bits (563), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 12/261 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L    G     +++     L   + FF    I R   HE I  I     FY
Sbjct: 20  RPRLEAEILLAHHLGCERTSLLLREGETLPREEEFF--ALIERRKAHEPIEYITNEVSFY 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++S    PRPETELLV+         I ++ + RI ++G G+GA+ + L +  P 
Sbjct: 78  SETFYIASGALIPRPETELLVEEVAHL----IREKGLKRIAEIGVGSGALSVTLARIFPE 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K V  DIS +AL IA  NA   GV +R +  QS     VE   ++IVSNPPYI +    
Sbjct: 134 LKIVATDISPEALSIAGVNAERFGVKDRIELRQSSLLDGVEA-VEMIVSNPPYIPAGT-- 190

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V D++P  +L    DG    R I              + E+GY+Q+  +   F+ 
Sbjct: 191 ELEPNVADYEPETALYAPGDGTDLLRQIVLLGQERGIP---IACEMGYDQRAAMEGFFKE 247

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
           + +     +KD  G DR  L 
Sbjct: 248 QGIEHYRFYKDLAGLDRGFLI 268


>gi|90416051|ref|ZP_01223984.1| probable DNA methylase [marine gamma proteobacterium HTCC2207]
 gi|90332425|gb|EAS47622.1| probable DNA methylase [marine gamma proteobacterium HTCC2207]
          Length = 314

 Score =  221 bits (563), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   L  V GL+        +  L  +Q+  +     R ++       + G   F
Sbjct: 49  NAWDEAVYLLSFVLGLAPDVDRTVLEKSLTPQQQAAILALYQRRIEERIPAAYLTGRAWF 108

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     ++ +            +  R+LDL TG+G + +A      
Sbjct: 109 CGLPFAVDERVIIPRSPIAEMIMTGFEPWCV----NEPRRVLDLCTGSGCIGIACAYAFE 164

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  DIS +AL++  +N   + +  R   ++SD F  + G  F +IVSNPPY+++  
Sbjct: 165 EAEVVLSDISPEALQVTAANIAQHKLGYRVSAVESDLFQQMSGEQFQLIVSNPPYVDAED 224

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P I+L  G DGL   R +    + HL ++G+  VE+G +  V + R F
Sbjct: 225 YASMPDEY-QHEPEIALASGSDGLDFTRRLLREAADHLTEEGVLVVEVGNSW-VALERDF 282

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            S     +   +   G+  V L  R
Sbjct: 283 PSVPFLWLEFSE---GDGGVFLLTR 304


>gi|307721343|ref|YP_003892483.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM
           16294]
 gi|306979436|gb|ADN09471.1| modification methylase, HemK family [Sulfurimonas autotrophica DSM
           16294]
          Length = 276

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 117/257 (45%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   L     +    +I   +S + + Q+  L   + R +K+E +  I     FY
Sbjct: 24  RAAREAQLLLMMHLEVDELWLITHQNSEVKETQQ--LLKWVERRVKNEPLEYITNSVSFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +      PRPETELL+D  +       +K   +   ++G G+G + + L K    
Sbjct: 82  SEEFYIDEGALIPRPETELLIDEVIKNV---PDKNSALTFAEVGVGSGIISIMLAKTFKN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K + VDIS KAL++A+ N    G+ E  +         V    D +VSNPPYIE  +  
Sbjct: 139 SKIIAVDISQKALDVAQKNIEKFGLQECIELRLGSLLEPVHEKIDYLVSNPPYIEEGV-- 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L      ++P+ +L GG+ G    + + D V +   K    S EIGY+Q+  +    + 
Sbjct: 197 ELESN-LSYEPQNALFGGMVGDEIIKKLLDEVLK--QKIKFFSCEIGYDQQDKIRTHIQK 253

Query: 242 RKLFLVNAFKDYGGNDR 258
           +    +  +KDY   DR
Sbjct: 254 KDFKAITFYKDYSSFDR 270


>gi|229551968|ref|ZP_04440693.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
 gi|258539382|ref|YP_003173881.1| modification methylase HemK [Lactobacillus rhamnosus Lc 705]
 gi|229314703|gb|EEN80676.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Lactobacillus rhamnosus LMS2-1]
 gi|257151058|emb|CAR90030.1| Modification methylase HemK protein [Lactobacillus rhamnosus Lc
           705]
          Length = 276

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 9/255 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      +  Q+I+     + D         + R    E    I G   F+     
Sbjct: 26  ARYVLMTRADWTPSQLILHRQDPMPDAAWRQFQADVARLAHFEPAQYITGQAPFFGTMFA 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV           E+ +    LD+GTG+GA+ L L ++ P      
Sbjct: 86  VTPAVLIPRFETEELVAWVAE------EQTNAQTGLDMGTGSGAIGLTLARQLPQIDMTL 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D+S  AL +AK              + SD F+ + G FD +V+N PYI       +   
Sbjct: 140 SDVSPSALAVAKQ--NAAAQKASVHFVTSDLFNHLPGRFDFVVTNLPYIAPEEASVMDQS 197

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLF 245
              ++P+++L     GL+ +      + +HLN  G   +E GY+Q+  + ++F E     
Sbjct: 198 TLRYEPKLALFADHHGLALFERFVTELPQHLNPHGAVYLEFGYHQEPALRQLFAEKLPQA 257

Query: 246 LVNAFKDYGGNDRVL 260
                +D  G+ R++
Sbjct: 258 QATFRRDMAGHPRMV 272


>gi|257126616|ref|YP_003164730.1| modification methylase, HemK family [Leptotrichia buccalis
           C-1013-b]
 gi|257050555|gb|ACV39739.1| modification methylase, HemK family [Leptotrichia buccalis
           C-1013-b]
          Length = 379

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/273 (24%), Positives = 121/273 (44%), Gaps = 11/273 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
           ++   +      +  +    +     + ++D +   +   I +  + +  +  +L  ++F
Sbjct: 103 ESKLIAEIVFSHILEIDRMMLFTKYRNEIEDEKIEKIRYFIKKIGQEKFPVQYLLNEQEF 162

Query: 61  YNVRLTLSSDTFEPRPETELLVDSA--------LAFSLPRIEKRDVVRILDLGTGTGAVC 112
           +  +  +      PR +TE+LV+ A        L  ++     ++  +ILD+G G+G + 
Sbjct: 163 FGRKFYVDKGVLIPRQDTEVLVEKAIEILKNDTLKKNISEKNSKNRKKILDIGAGSGIIG 222

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSN 171
           +++  E      +G+DIS KALE ++ N     V      L+S+ F ++E   FD+I+SN
Sbjct: 223 ISVALEIKDSYVLGIDISEKALETSEKNKEILNVK-NIKFLKSNLFENIEFKEFDMIISN 281

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI    V  +  +    +P  +L    DGL  Y  I      +L   G    EIGY Q
Sbjct: 282 PPYISFNEVGIMSDDTLLHEPSDALFAENDGLYFYYEICQNALDYLADSGYLLFEIGYKQ 341

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +V  I  S     V   KD  G DRV++  +
Sbjct: 342 GNNVAEIMTSSGFKNVEVIKDLTGLDRVVVGQK 374


>gi|33860876|ref|NP_892437.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
 gi|33633818|emb|CAE18777.1| putative protein methyltransferase [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 289

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 6/217 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            I  + G   + N++L +S+    PRPETEL++D        + EK   +  +DLGTG+G
Sbjct: 74  PIQYLSGISFWRNLKLEVSNRVLIPRPETELIIDIISGIFKNKEEK---ITFVDLGTGSG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166
           A+ +AL  E+P + G+  DI   A++IA  N  T            +W+  ++   G  D
Sbjct: 131 AISIALALENPNWNGIATDIDKNAIKIASRNFATYSNQSNLKFYNGNWWDPLKNFKGEID 190

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
             VSNPPYI     + L +EV++F+P+++L GG +GL H   I      +L   G   +E
Sbjct: 191 FAVSNPPYIPQDTYEVLPIEVKNFEPKLALLGGQEGLDHINQIVQNAPLYLKNKGWLLIE 250

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++Q   V ++F   +   V   KD+ G  R  +  
Sbjct: 251 NHFDQGEKVKKLFLENRFTSVKVLKDFSGIGRFTIGR 287


>gi|152992202|ref|YP_001357923.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1]
 gi|151424063|dbj|BAF71566.1| protoporphyrinogen oxidase [Sulfurovum sp. NBC37-1]
          Length = 282

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 14/259 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L          ++   + V++D +     + + R   +E    I+G   FY++ L
Sbjct: 33  EAELLLAHHLQKDRMYLVTHDNDVMEDPE--SYRHLVERRAANEPYEYIVGSASFYDLHL 90

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE+L+D         IE+  + RI ++G G+GA+ + L ++ P    V
Sbjct: 91  EVEKGVLVPRPETEILIDLVAGI----IEEEKISRIAEIGVGSGAISIVLARKFPELNIV 146

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS   +++A+ N  T G+ ++ +  +S+    V+   +++VSNPPYI    +  L  
Sbjct: 147 ATDISEIPIKVARKNIETFGLEKQIELRRSNLIDEVDERVELVVSNPPYIAEGFL--LES 204

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVDVVRIFESRK 243
            V D++P+ +L GG  G    + I   V     + G    + E+GY+QK  +    +   
Sbjct: 205 NVVDYEPKEALFGGRVGDELLKQIILDV----KEKGIRWLACEMGYDQKEPIASFVKEIG 260

Query: 244 LFLVNAFKDYGGNDRVLLF 262
           +  +  +KD  G DR  + 
Sbjct: 261 VQSIKFYKDLVGFDRGFII 279


>gi|242240012|ref|YP_002988193.1| modification methylase, HemK family [Dickeya dadantii Ech703]
 gi|242132069|gb|ACS86371.1| modification methylase, HemK family [Dickeya dadantii Ech703]
          Length = 310

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 64/237 (27%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   IVR +     +  +     F  +   +      PR     L+D+    
Sbjct: 68  LTLSERQRIVERIVRRVNERIPVAYLTNKAWFCGLEFYVDERVLVPRSPIGELIDNRFDS 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP   +     ILDL TG+G + +A     P  +   VDIS +AL + + N   +GV  
Sbjct: 128 LLPHQPQ----HILDLCTGSGCIAIACAHAFPEAEVDAVDISPEALAVTEQNIQQHGVEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               + SD F S+    +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R
Sbjct: 184 SVTPICSDLFRSLPAIKYDLIVTNPPYVDEEDMFDLPQEYR-HEPELGLAAGDDGLDLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  DG+   E+G N  V ++  +    +  +    D  G D V +  R
Sbjct: 243 RILACAPDYLRDDGVLICEVG-NSMVHMMDQYPDIPVTWLEF--D-NGGDGVFMLTR 295


>gi|254426996|ref|ZP_05040703.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
 gi|196193165|gb|EDX88124.1| methyltransferase, HemK family [Alcanivorax sp. DG881]
          Length = 309

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 15/263 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPD----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + L     L    +  DP      +L      +L+  + R      +  +     F 
Sbjct: 45  EALALLMHQLALP---LQSDPRILDARLLPSEISGYLSQLVKRVNDRVPVPYLTHEAWFC 101

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PR     L++ +     P ++   V R+LDL TG+G + +A       
Sbjct: 102 GLPFYVDERVLIPRSPLAELIEQSF---TPWVDPERVHRVLDLCTGSGCIAIACAYAFEH 158

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  G DIS +AL + + N   +G++E+   LQSD  ++V+G +D+IVSNPPY+++  + 
Sbjct: 159 AQVDGSDISAEALAVCEENIQRHGLAEQVRALQSDGLAAVDGPYDLIVSNPPYVDAQDMA 218

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++L  G DGL   R +       L ++G+  VE+G +    +++ +  
Sbjct: 219 SLPDEYR-HEPELALASGDDGLDFTRKLLLDAPDQLTEEGVLIVEVGNSW-EAMLQTWPQ 276

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F     +  GG+  V +  R
Sbjct: 277 VPFFWFEFER--GGHG-VFMLTR 296


>gi|90021737|ref|YP_527564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Saccharophagus degradans 2-40]
 gi|89951337|gb|ABD81352.1| modification methylase, HemK family [Saccharophagus degradans 2-40]
          Length = 300

 Score =  221 bits (563), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 61/228 (26%), Positives = 112/228 (49%), Gaps = 6/228 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++ + +  V      ++    D+ L + ++  L   I + ++ H  +  + G   F
Sbjct: 36  NAWDEAVALVMWVVQQPFDRLEWVLDAKLVEAEKQQLAQLIDKRVQQHIPLPYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  ++ D   PR     L++      L +       +ILDL TG+G + +A      
Sbjct: 96  AGLKFHVTPDVLIPRSPIAELIEREFQPMLQQY----PAKILDLCTGSGCIGIACAYAFE 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DIS  AL++A+ N   + + +R  T++SD F  + G +D+IVSNPPY+++  +
Sbjct: 152 EAMVDISDISTAALDVAQLNIANHTLQDRVSTVESDVFDGITGQYDLIVSNPPYVDAQDM 211

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  E +  +PR++L+ G DGL   R I    ++HL +DGL  VE+G
Sbjct: 212 ASIPAEYQV-EPRMALESGDDGLDITRRILAKAAQHLTEDGLLVVEVG 258


>gi|296225309|ref|XP_002758436.1| PREDICTED: hemK methyltransferase family member 1-like [Callithrix
           jacchus]
          Length = 338

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALRTQPLTSQQLQCIQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLKMMPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D++V
Sbjct: 178 LSQLPQSRVIAVDKGETAISLTHENAQRLRLQDRIWIIHLDMTSEGSWTHLPWGPVDLVV 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+    ++ L  E+  ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYVFHQDMEQLAPEIHSYEDPAALDGGEEGMDIITHILALAPRLLKDCGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 RHLELVSSWLQSRPELYLNLVAVRRDFCGRPRFLHIRR 335


>gi|116629882|ref|YP_815054.1| methylase of polypeptide chain release factor [Lactobacillus
           gasseri ATCC 33323]
 gi|282851602|ref|ZP_06260967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 224-1]
 gi|311110482|ref|ZP_07711879.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri MV-22]
 gi|116095464|gb|ABJ60616.1| Methylase of polypeptide chain release factor [Lactobacillus
           gasseri ATCC 33323]
 gi|282557570|gb|EFB63167.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 224-1]
 gi|311065636|gb|EFQ45976.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri MV-22]
          Length = 280

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  + ++  D  L   Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DIDYVLGERLGYTPSEFLLHIDDELSLAQEKQALKDMKKLCRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG- 124
            ++     PR ETE LV  AL         +   +ILDLGTG+GA+ +AL+K++   K  
Sbjct: 83  LVNRGVLIPRFETEELVKWALENI------KSGEKILDLGTGSGAIMVALVKQAQDRKIE 136

Query: 125 ----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +   +  R  T +++    +E  FD I+SNPPYI++   
Sbjct: 137 NLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLE-KFDTIISNPPYIKTSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D +   V   +P  +L GG DGL  YR  A  +  HL   G   +E G+++K  +  +FE
Sbjct: 194 DLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFFLEFGFSEKDQLKDLFE 253

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263
           +    F +    D  G  R++   
Sbjct: 254 AELPDFEIEFKNDLAGKPRMVHGR 277


>gi|167817594|ref|ZP_02449274.1| protein methyltransferase HemK [Burkholderia pseudomallei 91]
          Length = 224

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R    E I ++ G R+F+ +   ++ D   PRPETELLV++AL      I+      +LD
Sbjct: 1   RRAAGEPIAQLTGAREFFGLEFDITPDVLIPRPETELLVETALD----AIDGIASPCVLD 56

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFS 159
           LGTG+GA+ +++  E P  +   ++ S  AL++A+ NA       R       L+SDW++
Sbjct: 57  LGTGSGAIAVSIASERPDARVWALERSVAALDVARRNARKLLDPARAGGPLRFLESDWYA 116

Query: 160 SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +++    F V+VSNPPYI          ++R F+PR +L    DGL+  RTI  G    +
Sbjct: 117 ALDPGLRFHVVVSNPPYIARHDPHLAEGDLR-FEPRGALTDENDGLAAIRTIVAGAHAFV 175

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              G   +E GY+Q   V  + ++     V +  D    +R
Sbjct: 176 APGGALWLEHGYDQAAAVRTLLDAAGFADVESRADLASIER 216


>gi|330811121|ref|YP_004355583.1| methyltransferase [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327379229|gb|AEA70579.1| Putative methyltransferase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 302

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +   +   + R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEDEELVHVQRLLRRRITERVPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L     ++  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDERVLIPRSPIGELIEKHFEPWL----GQEPARILDLCTGSGCIGIACAYEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +GV ER  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVVLADLSFEALEVANQNIERHGVDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FADMPQEY-QHEPELGLACGDDGLNLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFER--GGH 281


>gi|89891629|ref|ZP_01203133.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
 gi|89516176|gb|EAS18839.1| putative protoporphyrinogen oxidase [Flavobacteria bacterium BBFL7]
          Length = 281

 Score =  220 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 103/258 (39%), Gaps = 6/258 (2%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                 +   S    ++     L   Q   L  ++      + I  I G   FY   + +
Sbjct: 28  QIVCEDLLNWSRSDFMIKDREELSHLQEEILQKSLRELRTSKPIQYITGKAHFYGHEIVV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +  T  PR ETE LVD  +       +    + I+D+GTGTG + L+L    P      +
Sbjct: 88  NEHTLIPRQETEELVDMIIKDH----KTESYLNIIDIGTGTGCIGLSLKAAKPDCIVTLM 143

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D+S +AL  A+SNA       +           +   +D+IVSNPPY+ ++    +   V
Sbjct: 144 DVSEEALATAQSNANHLKTPVKTILQDVLALDELPEKYDIIVSNPPYVRNLEKKEIHDNV 203

Query: 188 RDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + +P ++L    D  L  YR I +     L  +G+   EI      ++  +        
Sbjct: 204 LENEPHLALFVEDDNALVFYRKIMELAKIALQPNGILYFEINQYLPEEMKALATELGFES 263

Query: 247 VNAFKDYGGNDRVLLFCR 264
              +KD  GN R++   R
Sbjct: 264 -EVYKDLNGNYRMMKCWR 280


>gi|307155020|ref|YP_003890404.1| modification methylase, HemK family [Cyanothece sp. PCC 7822]
 gi|306985248|gb|ADN17129.1| modification methylase, HemK family [Cyanothece sp. PCC 7822]
          Length = 299

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 12/267 (4%)

Query: 9   SFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNV 63
             L  V  L+  ++ +    +   +   +    LT+   + L     +  ++G   +   
Sbjct: 33  WLLQEVAELTHLELRLETFKNRSKIPLKQSLSELTDLWQQRLTCRLPVQYLVGVTPWRKF 92

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPF 121
           ++ +S D   PRPETE ++D  L  ++P     D+     +DLGTG+GA+ L L      
Sbjct: 93  KIKVSPDVLIPRPETEYIIDIVLK-AIPESPLFDIASGNWVDLGTGSGAIALGLADILTN 151

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
                VD S  AL+IA+ NA+  G +ER    Q  W++ +E   G  + +VSNPPYI + 
Sbjct: 152 ATIYAVDRSRGALDIAEDNAIEWGFAERIHFKQGFWWTPLEFLRGQVNGMVSNPPYIPTE 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           ++  L  EV   +P I+LDGG  GL   R + +    +L   G+  +E+   Q   V ++
Sbjct: 212 LIATLDPEVAYHEPHIALDGGEGGLESIRYLIESSPPYLRSGGIWLIEMMAGQAEQVAQL 271

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
              +     +  F D+ G +R  L  R
Sbjct: 272 LACQGSYQNIQIFPDFAGIERFALAYR 298


>gi|291514584|emb|CBK63794.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alistipes shahii WAL 8301]
          Length = 279

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 20/266 (7%)

Query: 4   LRDSHSF----LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
            R++ S     +  ++GLS   ++ DP++ L           +      E +  ++G  +
Sbjct: 20  AREARSIALAAVAELSGLSPSALLTDPEAELAVEGLEEAAARLA---AGEPLQYVVGHTE 76

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           FY  R  +      PRPETE LVD+ L        +R+  R+LD+GTG+G +  +L    
Sbjct: 77  FYGRRFAVREGVLIPRPETEELVDAILHG------EREARRLLDVGTGSGCIAASLALGM 130

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
           P  +    DIS  AL +A  N    G +      ++D  + +E      FD IVSNPPY+
Sbjct: 131 PGTEVFAADISDDALTVAAENFQQLGAA--VTLRKADALNGLEEAFPERFDAIVSNPPYV 188

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                  +   VRD +P ++L     D +  YR IA    + L   G    EI      +
Sbjct: 189 PESDRAAMHPNVRDHEPGLALFVPDDDAIRFYRAIARAGRQMLTPGGRLWFEIYERAAAE 248

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
           +VR+  +         +D  G  R++
Sbjct: 249 IVRMLGAEGYTDTEVREDLFGKPRMV 274


>gi|225629882|ref|YP_002726673.1| modification methylase, HemK family [Wolbachia sp. wRi]
 gi|225591863|gb|ACN94882.1| modification methylase, HemK family [Wolbachia sp. wRi]
          Length = 284

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 74/257 (28%), Positives = 129/257 (50%), Gaps = 6/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +  V G+    +IV+    +   +         +  +   I +I+G R+F++  
Sbjct: 25  LDCEIIMQHVLGVERSFIIVNHADQVPMEKELLFWKLTKKRAERYPISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E L+ + L +      K+  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETLISTVLKY---YPNKKQRLKIADFGTGTGCLLISVLSEYKYAVG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S +A ++A  N   + +  R     S W      LFD+I+SNPPYI+   +  L 
Sbjct: 142 VGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSSWIE-CSDLFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +P+ +LDGGIDGL+ Y +I   + R L K+G   +EIG +Q  ++ +I  S +L
Sbjct: 201 AEVQK-EPKTALDGGIDGLNCYLSIFPILRRCLKKNGFAILEIGEDQS-NIDKIIPSYEL 258

Query: 245 FLVNAFKDYGGNDRVLL 261
                  D  G  R ++
Sbjct: 259 AFQEYVYDLAGMKRCIV 275


>gi|311033343|ref|ZP_07711433.1| HemK family modification methylase [Bacillus sp. m3-13]
          Length = 260

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 13/259 (5%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
             L   Q+      ++    +      + + +    +  ++G  +FY     +S +   P
Sbjct: 1   MKLDRAQLFSRMQEMMPMEMQSSFIFNVHKHVAGIPVQYLMGKEEFYGRSFFVSEEVLIP 60

Query: 75  RPETELLVDSALAFSLPRI-------EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           RPETE LV   L                 + + ++D+GTG+GA+ + L  E+        
Sbjct: 61  RPETEELVVGVLDRVKKHFGDDTVSDAAGEKLSVVDVGTGSGAIAITLALENSSLNVHAT 120

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DI+ ++LE+A  NA   G       LQ D        +   DV+VSNPPYI     + L 
Sbjct: 121 DIAGESLEVAMDNAEALGAE--VAFLQGDLLLPFIEQDIKVDVVVSNPPYIPQKEYEGLS 178

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
             V+DF+P  +L GG+ GL  Y    D + + L +  + + E+G  Q  DV  + E    
Sbjct: 179 TVVKDFEPYRALVGGVSGLEFYERFMDELPKVLKERAIVAFEVGMGQGEDVKALLEKTFP 238

Query: 244 LFLVNAFKDYGGNDRVLLF 262
              V    D  G DR++  
Sbjct: 239 QSKVEVVLDINGKDRMVFA 257


>gi|298735926|ref|YP_003728451.1| protoporphyrinogen oxidase [Helicobacter pylori B8]
 gi|298355115|emb|CBI65987.1| protoporphyrinogen oxidase [Helicobacter pylori B8]
          Length = 276

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L  ++       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEHLELTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + ER    ++  +  +    +++VSNPPYI       L 
Sbjct: 139 HASDISPNALEVALKNIERFNLKERVFLKKTRLWDRMP-TIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|119775295|ref|YP_928035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella amazonensis SB2B]
 gi|119767795|gb|ABM00366.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella
           amazonensis SB2B]
          Length = 314

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 19/269 (7%)

Query: 2   QALRDSHSFLCRVTGLS----SHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILG 56
            A  ++ + +     L        +  +    L   ++  +   I+R ++    +  +  
Sbjct: 40  NAWDEAVALVFHALHLPDDLGREVIGAN----LTSSEKHKIVELIIRRVRERLPVPYLTN 95

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              F  +   +      PR     +++       P +  + V R+LDL TG+G + +A  
Sbjct: 96  RAWFAGLEFYVDERVLVPRSPIAEMIE---DRFGPWLYNKPVNRVLDLCTGSGCIAIACA 152

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPY 174
                 +   +DIS  AL++A+ N  ++G+ ER   +QSD FS++     +D+IVSNPPY
Sbjct: 153 HTFEDAEVDALDISEDALDVAQINVESHGLVERVFPMQSDLFSAIPKGPQYDLIVSNPPY 212

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           ++   +  +  E    +P I L  G DGL   + I    + +L   G+  VE+G N  V 
Sbjct: 213 VDEEDIGDMPDEY-HHEPAIGLASGRDGLDITKRILANAADYLTPSGILVVEVG-NSMVH 270

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           ++  F       V+  +   G D V +  
Sbjct: 271 LMEQFPEVPFTWVSFER---GGDGVFVLT 296


>gi|304311242|ref|YP_003810840.1| Adenine-specific methylase [gamma proteobacterium HdN1]
 gi|301796975|emb|CBL45188.1| Adenine-specific methylase [gamma proteobacterium HdN1]
          Length = 319

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 9/247 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNV 63
           ++   +     L    +     +  + DR++  +   + + + +      ++G   F  +
Sbjct: 55  EAVMLVLHALHLP-WDIDARVQECRVTDREKEQILTLVQKRIVERIPTAYLIGRAWFAGL 113

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR     L++       P I    V  ILDL TG+G + +A     P   
Sbjct: 114 EFKVDDRVLIPRSPIGELIEKQFE---PWIAAERVESILDLCTGSGCIGIACAHHFPDVI 170

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VDIS  AL+IA+ N    G+  + + + SD F +++G  +D+IVSNPPY++   +  
Sbjct: 171 VDCVDISEAALDIAEENLQNLGLESQVNLIFSDLFEALDGRTYDIIVSNPPYVDERDMAE 230

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E R  +P + L+ G DGL   R I   +SRHLN +G+  +E+G N    + + +   
Sbjct: 231 LPTEYR-HEPELGLEAGGDGLDIVRRILPELSRHLNPEGIAVIEVG-NSMEALEQAYPHV 288

Query: 243 KLFLVNA 249
               +  
Sbjct: 289 PFTWIEF 295


>gi|116625720|ref|YP_827876.1| HemK family modification methylase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228882|gb|ABJ87591.1| modification methylase, HemK family [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 272

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 12/258 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     +        P+  L + +       +   L  +    I   ++FY+    
Sbjct: 26  AEVLLGHAMRVQREYFYAHPEQELREVEWLHYGRYLHERLGGKPTQYITHRQEFYSREFR 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE +V++AL  +      R   R+LD+GTG+GA+ + L  E    +   
Sbjct: 86  VTPDVLIPRPETEHVVEAALEVA------RGAKRVLDVGTGSGALAITLRLEM-GTEAWA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185
            DIS +A  +A  NA   G +  F     D   ++     ++IVSNPPY+     + L  
Sbjct: 139 TDISAEAATVAAGNAARLGANVHFAV--CDLMDAIAADSMNLIVSNPPYVPLAHREGLQR 196

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVRDF+P ++L GG  G   Y  I     R L   G   +E+G+     V  +  S    
Sbjct: 197 EVRDFEPHVALFGGQTGFELYDRIVADAPRVLRPGGWLIMELGFTSLDHVRALLAS--WS 254

Query: 246 LVNAFKDYGGNDRVLLFC 263
            V    D  G  RV+   
Sbjct: 255 DVRVIPDLAGIPRVIAAR 272


>gi|148244860|ref|YP_001219554.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326687|dbj|BAF61830.1| protein methyltransferase HemK [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 270

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 14/256 (5%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L      S  Q+I   +  L   ++  L   I           + G + FY++   ++
Sbjct: 25  LLLSLTLDKSHAQLISHNNYQLSSNEKNQLNQFIKHRQSGVPFAYLSGTKGFYHLDFKVT 84

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            DT  PRPETELL+D AL        +     +LDLGTG+G + + +  ++P +     D
Sbjct: 85  PDTLIPRPETELLIDIALGL----FNQNQTYEVLDLGTGSGVIAITISDKNPNWNLTATD 140

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
            S  AL +AK N  TN      +     WF +     FD+I+SNPPYI+   +       
Sbjct: 141 FSINALAVAKQNTKTN-----INFQLGSWFEATPNQTFDLIISNPPYIKQNDIHLNE--- 192

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             F+P+ +L  G DGL   + I + + + LN+ G   +E G+NQ+  ++++ +    F +
Sbjct: 193 LRFEPQSALISGKDGLDDIQIIINNIPKFLNEKGYLLLEHGFNQQQKIIQLLKDN-FFNI 251

Query: 248 NAFKDYGGNDRVLLFC 263
             FKDY   +R +L  
Sbjct: 252 KKFKDYNQKNRAILAQ 267


>gi|330846742|ref|XP_003295164.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum]
 gi|325074183|gb|EGC28309.1| hypothetical protein DICPUDRAFT_44415 [Dictyostelium purpureum]
          Length = 340

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 80/277 (28%), Positives = 126/277 (45%), Gaps = 17/277 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +  +S   +  V  + S  + +    +    L + +   L   + R L +E I  ++G+R
Sbjct: 59  SELESRVLISHVLDIDSSAITLFSKKNQHRFLTNEEYSRLQELVNRRLLNEPISYLIGYR 118

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F+  +      T  PRP++E +V+  L        K D  R+LDLGTGTG + L++L E
Sbjct: 119 YFWKHKFHCDRSTLIPRPDSETIVEKILEEKNKNNLKFD--RVLDLGTGTGCLLLSILYE 176

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVS 170
                GVG+D S ++L +A  NA    + +R   L SDW               FD+++S
Sbjct: 177 LDGSFGVGIDKSKESLLLANKNAKELELKDRVCFLNSDWNHQESLVKELGQFKPFDLVIS 236

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI---ADGVSRHLNKDGLCSVEI 227
           NPPYI       L   V+D++P  +L    +GL  YR I          L+ +     EI
Sbjct: 237 NPPYISIDEYKELNETVKDWEPTTALIADENGLKDYRNIGLLLKNNKELLSNNAQVVFEI 296

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G  Q+ D++ I ES      ++ KD     R L+F R
Sbjct: 297 GKGQENDIIEIMESCGFKFTDSKKDLSSIIRCLVFTR 333


>gi|194862510|ref|XP_001970018.1| GG23621 [Drosophila erecta]
 gi|190661885|gb|EDV59077.1| GG23621 [Drosophila erecta]
          Length = 323

 Score =  219 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKRKFNLVPDSYDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDLTLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ L++L   P  +   ++
Sbjct: 121 PSVFIPRPETEEFVRLVIE----NYKNAKHVDLLEVGCGSGAMSLSMLHSLPQVEATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYMPEVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G      V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNEHPPLVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V ++ D    +R +
Sbjct: 297 KYEGRLKFVASYNDQYQRERFV 318


>gi|240169514|ref|ZP_04748173.1| modification methylase HemK [Mycobacterium kansasii ATCC 12478]
          Length = 282

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 112/264 (42%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      +TG     ++   D            + +    +   +  + G   F  
Sbjct: 23  ARWDAEQLAAHLTGTERG-LLAVLDHAPGAEFFAQYHDIVTARSRRVPLQHLTGTVSFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETE L++ A A  LP+        I+DL TG+GA+ +AL +  P  
Sbjct: 82  VELRVGPGVFIPRPETEALLEWATAQPLPQ-----RAVIVDLCTGSGALAVALARHRPAA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           + +G+D S  ALE A+ NA  + V   R D         ++   D++++NPPY+      
Sbjct: 137 RIIGLDDSEAALEYARRNAEGSNVELIRADVTTLGLRPDLDRRVDLVIANPPYVPDN--A 194

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  EV   DPR ++ GG DG++    +     R L   GL +VE         V    S
Sbjct: 195 TVEPEVAQHDPRHAVFGGPDGMAVIAHVVRLAGRWLRPGGLLAVEHDDTTSGLTVEFISS 254

Query: 242 RKLFL-VNAFKDYGGNDRVLLFCR 264
             LF  + A KD  G  R +   R
Sbjct: 255 TGLFETIVARKDLAGRPRFVTAGR 278


>gi|330502852|ref|YP_004379721.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina NK-01]
 gi|328917138|gb|AEB57969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas mendocina NK-01]
          Length = 306

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +   L   + R ++       +LG   F
Sbjct: 35  NAWDEARQLVLGALHLPWEISDAYLDCRLEDDEHAHLQALLQRRIEERVPTAYLLGEAWF 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+D   +  LP     +  RILDL TG+G + +A   E P
Sbjct: 95  CGLPFVVDERVLVPRSPIAELIDRHFSPWLPI----EPARILDLCTGSGCIGIACAYEFP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+ ER   +Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 151 EAEVVLGDLSFEALEVANLNIERHGLEERVYCVQGDGFAELPGQRFDLIVSNPPYVDAED 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL + G+  VE+G +Q V V  ++
Sbjct: 211 FADMPAEY-QHEPEMGLACGADGLDLVRRMLAEAADHLTERGVLIVEVGNSQ-VHVEALY 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  ++  +  GG+   LL  +
Sbjct: 269 PEVDFTWLDFQR--GGHGVFLLAAK 291


>gi|91070576|gb|ABE11479.1| putative protein methyltransferase [uncultured Prochlorococcus
           marinus clone HOT0M-7C8]
          Length = 289

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 6/217 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            I  + G   + +++L ++     PRPETEL++D        + +K   +   +LGTG+G
Sbjct: 74  PIQYLCGITFWRDLKLKVTDKVLIPRPETELIIDIVFKIFGKQSQK---LFFAELGTGSG 130

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166
           A+ +AL    P + G+  DIS  AL+IA  N +              W++     +G  D
Sbjct: 131 AISIALALAYPSWNGIATDISQDALDIATKNYINCSKYTNLKFYCGHWWTPFGSFKGKLD 190

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           + +SNPPYI     + L  EV++F+P I+L GG DGL H   I       L + G   +E
Sbjct: 191 LAISNPPYIPKDTYEKLPKEVKNFEPEIALLGGEDGLKHITEIIQKAPLFLKEKGWLILE 250

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             ++Q   V ++    K   V    D  G  R  +  
Sbjct: 251 NHFDQGEKVKQLLIKSKFKSVEIVNDLSGVGRFTIGR 287


>gi|226944463|ref|YP_002799536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Azotobacter vinelandii DJ]
 gi|226719390|gb|ACO78561.1| Modification methylase [Azotobacter vinelandii DJ]
          Length = 306

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L++ +   L   + R ++       +LG   F
Sbjct: 35  NAWDEARQLVLGALHLPWETADGYLDCRLEEDECMHLGALLQRRIEERIPAAYLLGEAWF 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+    A  LP     +  RILDL TG+G + +A   E P
Sbjct: 95  CGLPFLVDERVLVPRSPIAELIGQRFAPWLPH----EPTRILDLCTGSGCIGIACAHEFP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S  ALE+A  N   + + ER  T+Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 151 GAEVVLADLSFDALEVANRNIERHALDERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAED 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E R  +P + L  G DGL   R +    + HL + G+  VE+G +Q V V  ++
Sbjct: 211 FADMPEEYR-HEPAMGLACGEDGLDLVRRMLAEAADHLTERGVLIVEVGNSQ-VHVETLY 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  +   +  GG+   LL
Sbjct: 269 PEVDFTWLEFTR--GGHGVFLL 288


>gi|157821261|ref|NP_001100323.1| hemK methyltransferase family member 1 [Rattus norvegicus]
 gi|149018619|gb|EDL77260.1| HemK methyltransferase family member 1 (predicted) [Rattus
           norvegicus]
 gi|171847399|gb|AAI61944.1| HemK methyltransferase family member 1 [Rattus norvegicus]
          Length = 340

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 76/279 (27%), Positives = 121/279 (43%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +       L+   +  ILG  
Sbjct: 60  EARESSEYIVAHVLG-AKTFQSLRPALWTKPLTPQQLECIQELCNHRLQRMPVQYILGEW 118

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L   A   P +  +D   IL++G G+GA+ L+L
Sbjct: 119 DFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPPAVRAQDGPLILEVGCGSGAIALSL 178

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVI 168
           L + P  + + VD    A+ +   NA    + +R   +  D  S          G  D++
Sbjct: 179 LSQLPKTQVIAVDKEEAAVSLTLENAQRLQLQDRIRIIHLDITSEGCCTHLLPWGPMDLV 238

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+R ++  ++LDGG +G+     I       LN  G   +E+ 
Sbjct: 239 VSNPPYIFRKDMEQLAPEIRSYEDLVALDGGDEGMDIITHILTLAPWLLNASGSIFLEVD 298

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +S+    L LV   +D+ G  R L   +
Sbjct: 299 PRHPELVSSWLQSQPDLHLSLVGVREDFCGRPRFLHVQK 337


>gi|255683365|ref|NP_598745.2| hemK methyltransferase family member 1 [Mus musculus]
 gi|168984587|emb|CAQ12135.1| HemK methyltransferase family member 1 [Mus musculus]
          Length = 340

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 60  EARESSEYIVAHVLG-AKTFQSLKPALWTKPLTPQQLECIQELCGRRLQRMPVQYILGEW 118

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +  +D   IL++G G+GA+ L+L
Sbjct: 119 DFQGLSLKMVPPVFIPRPETEELVEWVLEEVAQRPHAVRAQDGPLILEVGCGSGAITLSL 178

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVI 168
           L + P  + V VD    A+ +   NA    + +R   +  D  S             D++
Sbjct: 179 LSQLPKSRVVAVDKEEAAVSLTHENAQRLQLQDRIRIIHLDITSEGCCTHLLPWSPLDLV 238

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+  ++  ++LDGG +G+     I     + LN  G   +E+ 
Sbjct: 239 VSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLAPQLLNASGSIFLEVD 298

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +S     L LV   +D+ G  R L   +
Sbjct: 299 PRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFLHVQK 337


>gi|289741777|gb|ADD19636.1| hemK methyltransferase family member 1 [Glossina morsitans
           morsitans]
          Length = 330

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 104/261 (39%), Gaps = 13/261 (4%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            +  V       +           Q    +           +  ILG  DF ++ L  + 
Sbjct: 68  LVAHVLKRKFSTLKSYKTEEFTAEQHSEFSRLCEARCARMPLQHILGEWDFMDLTLKTAP 127

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             F PRPETE  V   +         +  + +L++G G+GA+ LA+L   P      ++ 
Sbjct: 128 TVFIPRPETEEFVSKVIEEYR---NVKQPIDMLEVGCGSGAISLAILNALPHVTSTAIER 184

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDC 182
           S  A  +A  NA +  +S+RF         +        +  FD+IVSNPPY+ +     
Sbjct: 185 SKVATTLAWENAKSLKLSDRFTPYNHTTSKNNYLPKELADRKFDLIVSNPPYVRTEEFPL 244

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-- 240
           L  EV  ++   +LDGG DGL   R + D    HL   G   +E+G      V  I    
Sbjct: 245 LQPEVTLYENLNALDGGQDGLQIARLVFDLACLHLRPGGKLWLELGSEHPPLVKTIMNLK 304

Query: 241 -SRKLFLVNAFKDYGGNDRVL 260
              +L  ++++ D    DR +
Sbjct: 305 YEGRLRFISSYIDQYKRDRFV 325


>gi|300777693|ref|ZP_07087551.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
           ATCC 35910]
 gi|300503203|gb|EFK34343.1| protein-(glutamine-N5) methyltransferase [Chryseobacterium gleum
           ATCC 35910]
          Length = 282

 Score =  219 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           S  F+ ++TG  + Q     +  L       L++ +          +ILG  +FY ++  
Sbjct: 27  SSLFIHQITGFDNFQQRRFSEQELLTADEEKLSHFVSELKTGRPYQQILGETEFYGMKFF 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +  +   PRPETE L++ A+        K   ++ILD+GTG+G + L L K  P      
Sbjct: 87  VDENVLIPRPETEELLEIAIREIKNSKFKDQDIKILDIGTGSGIISLVLKKYFPEAHISS 146

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
           VD S KAL  AK NA  + +   F  + +D+ +   G  +D+I+SNPPYI       +  
Sbjct: 147 VDFSEKALNTAKRNAEYHQLEINF--IHADYLNYEPGEDYDIIISNPPYIGIEEEIEIAD 204

Query: 186 EVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            V++F+P+++L     D L  YR IA+   ++L++DGL  +EI      + + ++     
Sbjct: 205 SVKEFEPKMALFSPTADALIFYRKIAEDAKKYLSEDGLLFLEINQKLGPETLDLY--HYF 262

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   KD   NDR +   +
Sbjct: 263 SNVQLLKDLSENDRFIYGRK 282


>gi|110636627|ref|YP_676834.1| protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC 33406]
 gi|110279308|gb|ABG57494.1| possible protoporphyrinogen oxidase [Cytophaga hutchinsonii ATCC
           33406]
          Length = 287

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
                +   +    +++      +  +  L   + R    E +  I+G   FY+    ++
Sbjct: 34  LLFEDIFHFTRIDFLINKQVNWSEANQQALDGYLSRLNSFEPVQYIIGKTFFYDSYFNVT 93

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             T  PRPETE LV   +  +          +I+D+GTGTG + ++L K+    +   VD
Sbjct: 94  PATLIPRPETEELVALIITEN-----NSAAPQIIDIGTGTGCIAISLAKKIKGARVTAVD 148

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGL 185
           IS +AL +A+ NA+ N VS     L+ ++    SS++  FD+IVSNPPY+       +  
Sbjct: 149 ISTEALAVAEENALKNEVS--VSFLEMNFLTQHSSIQSSFDIIVSNPPYVLQSEKKEMRE 206

Query: 186 EVRDFDPRISLDGGIDG--LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            V   +P ++L    DG  L +Y  +    S HL+KDG    EI   +  +++++  +  
Sbjct: 207 NVLAHEPHLALFV-EDGNALIYYDALLKFASSHLHKDGTFYAEINEQKGNELIKLAHTYG 265

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
                  KD    DR++   R
Sbjct: 266 FADSTIIKDLYQKDRIIKARR 286


>gi|189054214|dbj|BAG36734.1| unnamed protein product [Homo sapiens]
          Length = 338

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 76/278 (27%), Positives = 116/278 (41%), Gaps = 16/278 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +     R L+   +  ILG  
Sbjct: 59  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTSQQLQCIRELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +       IL++G G+GA+  +L
Sbjct: 118 DFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVGCGSGAISPSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIV 169
           L + P  + + VD    A+ +   NA    + +R   +  D      W     G  D+IV
Sbjct: 178 LSQLPQSRVIAVDKREAAISLTHENAQRPRLQDRIWIIHLDMTSERSWTHLPWGPMDLIV 237

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+    ++ L  E+R ++   +LDGG +G+     I     R L   G   +E+  
Sbjct: 238 SNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDIITHILALAPRLLKDSGSIFLEVDP 297

Query: 230 NQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 RHPELVSSWLQSRPDLYLNLVAVRRDFCGRPRFLHIRR 335


>gi|326803666|ref|YP_004321484.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650377|gb|AEA00560.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Aerococcus urinae ACS-120-V-Col10a]
          Length = 239

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/226 (30%), Positives = 114/226 (50%), Gaps = 6/226 (2%)

Query: 38  LTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
               + + +        +LG   FY  R  +++ T  PR +TE L+D          +  
Sbjct: 9   YQEMLEKIVNEDMPYQYLLGEAWFYGYRFRVNAATLIPRFDTERLIDCV-HTLRKSGQLE 67

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LDLGTG+GA+ + L KE P  K   VDIS  AL +AK NA  + V+   + ++ D
Sbjct: 68  KQADVLDLGTGSGAIAVTLAKELPDLKLTAVDISSDALAVAKENAYFHQVT--IEWIKGD 125

Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +V +  FD+I+SNPPYI    +  +G +V  ++P+++L    DG  +Y+  A  +  
Sbjct: 126 MLDAVAQRKFDLIISNPPYISENEIGEMGEDVLMYEPKLALFAKDDGYYYYKQFARRIQS 185

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVL 260
            +  DG   +E G +Q   ++ +F +S     V + KDY G DR++
Sbjct: 186 FMKADGTLLMECGSHQAAKIISLFKKSNPKAEVKSIKDYNGIDRII 231


>gi|148241523|ref|YP_001226680.1| protoporphyrinogen oxidase [Synechococcus sp. RCC307]
 gi|147849833|emb|CAK27327.1| Protoporphyrinogen oxidase [Synechococcus sp. RCC307]
          Length = 294

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 15/272 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSV--LDDRQRFFLTNAIVRSLKHESIHRILGW 57
           A  D    L    GL   ++    + P++   LD   +           +   +  ++G 
Sbjct: 25  AALD--WLLELEAGLRWRELQASYLHPEAPVQLDCSLQRLEQIWQQHCQQQVPLQHLVGR 82

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             + +  L +S     PR ETELLV+ A+             R  DLGTG+G + +AL +
Sbjct: 83  CPWRDFELEVSPAVLIPRQETELLVELAMGCFEA---SDAPQRWADLGTGSGCLAVALAR 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVE---GLFDVIVSNP 172
             P   G  VD S +AL +A+ NA   G+  S      +  W+  ++   G  D++VSNP
Sbjct: 140 HWPSSCGWAVDCSREALAVARRNAAALGLLQSAALQWCEGLWWQPLQPLAGQLDLVVSNP 199

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S +VD L   VRD +PR++LDGG DGL   R I +   + L   G   +E  ++Q 
Sbjct: 200 PYIPSAVVDGLEPVVRDHEPRLALDGGSDGLDALRLIIEAAPQMLAPGGWLVLEHHHDQA 259

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             V  +  +  L      +D  G  R  +  R
Sbjct: 260 AAVAELLGAAGLQERRQERDLEGQMRFAVVRR 291


>gi|114330608|ref|YP_746830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosomonas eutropha C91]
 gi|114307622|gb|ABI58865.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosomonas eutropha C91]
          Length = 306

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 10/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFY 61
           A  ++   +     L++ Q+ +  D++L   +R  +   I R  + +  +  +       
Sbjct: 47  AYDEAALLIMHALYLNADQLDLFMDAMLTYNERDQVLRIIERRAREKIPVAYLTHEAWLG 106

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +      PR     L+   L+  +  I+  D+   LDL TG+G + + L      
Sbjct: 107 DFNFYVDERVIIPRSFIAELLHDRLSPWV--IDPHDINSALDLCTGSGCLAILLAHAFEQ 164

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VDIS  AL++A  N     +  R + + +D F+ ++G  +D+I+SNPPY+ +V +
Sbjct: 165 AQIDAVDISSDALDVASINIRNYDLMNRINLIHADLFTRLQGKRYDLIISNPPYVNAVSM 224

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P I+L GG+DGL     I    + HL ++GL  +EIG+NQ   + + F 
Sbjct: 225 AMLPEEYR-HEPAIALAGGLDGLDIVHRILREAADHLTENGLLIMEIGHNQAE-IEQAFP 282

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 + A     G D+ LL  R
Sbjct: 283 QLSCTWLEA---SAG-DQFLLMVR 302


>gi|288929018|ref|ZP_06422864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330002|gb|EFC68587.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 317 str. F0108]
          Length = 285

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 101/264 (38%), Gaps = 5/264 (1%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     GLS   V     + L       L   + + ++   +  +LG  DF 
Sbjct: 9   EAKAIVRMVLDVGFGLSLADVYAGKVTQLSQDDDHRLRKMMDKLVQGVPVQYVLGRADFA 68

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PRPETE L    +              +LD+GTG+G +   L  + P 
Sbjct: 69  GRTFDVAQGVLIPRPETEELCVWIVQTCSNLPVCGTSPTLLDVGTGSGCIATTLALDLPT 128

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           ++   +DIS  AL+IA  NA   G   RF    +        L+DVIVSNPPYI      
Sbjct: 129 WRVSAIDISQTALDIAARNAQKLGAEVRFALQDALCMPPDADLWDVIVSNPPYIMQREAQ 188

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V   +P  +L     + L  Y +IA      L + G    EI       + R+  
Sbjct: 189 QMLPNVLQNEPHSALFVPNENPLLFYESIARYALHALKRGGKLFFEINPLCHEAMQRMLA 248

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +    D  G  R++   R
Sbjct: 249 CMGWQRIETRNDAFGKQRMMSAIR 272


>gi|225350886|ref|ZP_03741909.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158342|gb|EEG71584.1| hypothetical protein BIFPSEUDO_02460 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 307

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/287 (22%), Positives = 109/287 (37%), Gaps = 28/287 (9%)

Query: 3   ALRDSHSFLCRVTGLS-----SHQVIVDPDSVL---------DDRQRFFLTNAIVRSLKH 48
              D+      V G+         ++    S L         +D         + R  K 
Sbjct: 23  PEHDAKLLAAEVFGVDLQTVDKAMLMGSETSELAKQGAKQSGEDAALKRFHTMVDRRSKR 82

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  I G   F  + L +    F PR ETEL+V   + +           +++DL  G+
Sbjct: 83  EPLQHITGHAPFRYLDLKVGPGVFIPRQETELVVQEGVDWITKH--GMYSAKVVDLCAGS 140

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWF 158
           GA+ L+ + E P  +   V+ S +  +  + N            +N   E  D  Q+   
Sbjct: 141 GAIGLSFVTEVPGSEVWAVEKSEQTAQWTRVNLNETAKKYPSIASNYHLEIADATQTPTL 200

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHL 217
           + ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I    ++ L
Sbjct: 201 NQLDGTIDIVLTNPPYVPLADIPQ-QPEVRDYDPDLALYGGSADGTLIPERIIARAAKLL 259

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              GL  +E    Q   +     S     V    DY G  R +   +
Sbjct: 260 KNGGLLVMEHDITQGERLSAFALSYGFSNVMVHNDYTGRPRYMTAKK 306


>gi|283768250|ref|ZP_06341163.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bulleidia extructa W1219]
 gi|283105127|gb|EFC06498.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bulleidia extructa W1219]
          Length = 284

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 8/255 (3%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  ++    + + +  +              + R L  E +  +LG+  FY  ++ ++ +
Sbjct: 29  LVELSQRERYDLYLHFEEEAPQELEKEFCLGMGRILNGEPMAHVLGYSWFYGYKMLVNGE 88

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR ETE L  + L          + + I D+GTG+GA+ + L KE    +    DIS
Sbjct: 89  VLIPRYETEELCANILNRMDTFFPHLEKIDIADVGTGSGAIAVTLCKEEKKCQMRASDIS 148

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEV 187
            +A+E+AK NA  N      +    +    +       DV+V NPPYI       +   V
Sbjct: 149 LEAIEMAKKNARLN--EATIEFFVGNMLDPLIEKGIYLDVLVCNPPYIPQEE--EMESSV 204

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RKLFL 246
            D++P I+L GG DGL +YR + +  +R L K    + E+G+NQ+  + ++ +       
Sbjct: 205 VDYEPHIALFGGKDGLKYYREVFENANRILKKKSFMAFEMGWNQREAISQLIQEMLPNDR 264

Query: 247 VNAFKDYGGNDRVLL 261
               KD  G DR+L 
Sbjct: 265 FEILKDMNGKDRMLF 279


>gi|134102727|ref|YP_001108388.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007816|ref|ZP_06565789.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|133915350|emb|CAM05463.1| putative methyltransferase [Saccharopolyspora erythraea NRRL 2338]
          Length = 291

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G+   ++++ P  ++D      L   + R  K   +  + G      V L
Sbjct: 28  DAELLAAHLLGVERTKLMMVP--LVDPPVVRELEELVRRRAKRVPLQHLTGTAHLGGVTL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPET    +  LA+ L  +E  +   ++DL +G+GA+ LA+    P     
Sbjct: 86  NVGPGVFVPRPET----ELLLAWGLALLEGVESPTVVDLCSGSGALALAVAHARPDAAVY 141

Query: 126 GVDISCKALEIAKSNA----VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V++   AL   + NA           R    D         ++G  D+++ NPPY+   
Sbjct: 142 AVEVGPAALSWVRRNADQQVAAGDTPIRLYAGDVTDPTLLMDLDGTVDLVLCNPPYVPEG 201

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  EVRD DP  ++ GG DGL   R +    +R L   G  ++E        V  +
Sbjct: 202 TP--VPPEVRDHDPHEAVFGGRDGLDVVRHVVGCAARLLRPGGGVAIEHDDTHGGSVPAL 259

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +R+ L  V    D  G  R     R
Sbjct: 260 LSARRVLTDVEDHTDLAGRPRFATARR 286


>gi|317506167|ref|ZP_07963988.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316255512|gb|EFV14761.1| protein-(glutamine-N5) methyltransferase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 297

 Score =  219 bits (558), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 12/270 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+      V     L + QR      +V+  +   +  +LG   F +
Sbjct: 31  PEHDARVLAAHVLGVKPG--FVWQVDSLSEEQREQFDWLVVQRSRRVPLQYLLGKVFFAS 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V + +    F PRPETE L   AL     R+ +     + DL +G+G++ L++    P  
Sbjct: 89  VEVLVGPGVFIPRPETEQLHVWALTALRARLWEIPEPVVFDLCSGSGSLGLSIAHSVPES 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSD-----WFSSVEGLFDVIVSNPPYI 175
               V+   KAL     N      S R     ++ D           G  D++V+NPPY+
Sbjct: 149 AVTLVENDPKALVWTHKNVQAGASSGRAPVRVVEGDVTDQALLPDGAGTVDLVVANPPYV 208

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S        EV DFDP  ++  G DGL     +   ++R L   G   VE        V
Sbjct: 209 PSGTPT--PPEVADFDPPQAVFAGPDGLDVIVGLVGNIARWLKPGGAFGVEHDEGHADQV 266

Query: 236 VRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
             +F +  +   V    D  G  R +   R
Sbjct: 267 RALFAKEERFREVKTMSDLAGRPRFVTGRR 296


>gi|297180268|gb|ADI16487.1| methylase of polypeptide chain release factors [uncultured
           bacterium HF4000_05M23]
          Length = 287

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 10/260 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +    G S+ Q +          Q   L   + R    E +  I G  +FY  R 
Sbjct: 28  DTRLLVRHAFGWSAEQQLGRLTDPAPAEQLELLETLVSRRAGREPLQYITGSTEFYRRRF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE LV  A+ F   R    +  R+ D+ TG+GAV ++L  E P  + V
Sbjct: 88  AVDPRVLIPRPETEQLVVQAIEFVRER--GIETPRVADICTGSGAVAISLALEMPAAEVV 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DIS  AL++A+ NA + G        + +    +    G FDVIVSNPPYI    +  
Sbjct: 146 ATDISAGALDVARHNAGSLGAE--VGFFEGELLDPLLDGHGRFDVIVSNPPYILRGAMPG 203

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK-DGLCSVEIGYNQKVDVVRI-FE 240
           L  EV   +P ++LDGG DGL   R +  G+   L   +    +EI    +  V+++   
Sbjct: 204 LQAEVAR-EPSLALDGGDDGLDVIRPLFVGILEKLKPTNSAAYIEIDPPIQDTVMQLALA 262

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
           +     ++   D  G  R +
Sbjct: 263 TFPHAGISLLTDLSGLTRCI 282


>gi|149375248|ref|ZP_01893020.1| putative DNA methylase [Marinobacter algicola DG893]
 gi|149360612|gb|EDM49064.1| putative DNA methylase [Marinobacter algicola DG893]
          Length = 294

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 9/241 (3%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +  D+ L   +R  +   + R +     +  +LG   F  +   +      PR     L+
Sbjct: 57  LFLDARLTREERALILERMQRRIDDRVPLAYLLGEAWFMGLPFHVDERVLVPRSPLGELI 116

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
              L    P +  + V RILDL TG+G + +A        +    DIS  AL++A  N  
Sbjct: 117 QGGLQ---PWLGNKPVGRILDLCTGSGCIGIAAASVFEDAEVDLADISTDALDVAAVNID 173

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            + V +R  T+++D F  +EG +DVI+SNPPY+++  +  +  E    +P + L  G DG
Sbjct: 174 YHEVGDRVSTVRADVFDGLEGRYDVILSNPPYVDADDIADMPAEY-GHEPELGLAAGRDG 232

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L     I    + +LN  GL  VE+G +  V +   +       +       G D V L 
Sbjct: 233 LDIAHRILARAADYLNPGGLLIVEVGNSW-VALQEAYPDMPFTWLEFE---NGGDGVFLL 288

Query: 263 C 263
            
Sbjct: 289 T 289


>gi|146282674|ref|YP_001172827.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas stutzeri A1501]
 gi|145570879|gb|ABP79985.1| probable DNA methylase [Pseudomonas stutzeri A1501]
          Length = 307

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 112/264 (42%), Gaps = 10/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  D+   +     L         D  L+  +   L N + R ++       +L    F
Sbjct: 35  NAWDDARQLVLGALHLPWEMSDSYLDCRLEADECEHLQNLLRRRIEERVPTAYLLEQAWF 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      LP   K    RILDL TG+G + +A   E  
Sbjct: 95  CGLPFIVDERVLIPRSPIGELIEHRFEPWLPGTPK----RILDLCTGSGCIGIACAYEFL 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             + V  DIS  ALE+A  N   +G+ ER  T+QSD F  +    FD+IVSNPPY+++  
Sbjct: 151 EAEVVLADISFDALEVANRNIEQHGLEERVYTVQSDGFDGLPNQRFDLIVSNPPYVDAED 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL  DG+  VE+G +Q V V  ++
Sbjct: 211 FADMPDEF-HHEPELGLACGNDGLDLVRRMLAEAADHLTDDGVLIVEVGNSQ-VHVQALY 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
                  +   +  GG+   LL  
Sbjct: 269 PEVDFTWLEFTR--GGHGVFLLAA 290


>gi|119898299|ref|YP_933512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Azoarcus sp. BH72]
 gi|119670712|emb|CAL94625.1| site-specific DNA-methyltransferase (adenine-specific) [Azoarcus
           sp. BH72]
          Length = 320

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 9/261 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++   +     L   ++    D+ +   +R  +  AI R +        I         R
Sbjct: 62  EAVWLILSTLALPLDRLEPFLDACIPSDERVQIFEAIERRVVDRVPTAYITQEAWLGEFR 121

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L++  +A  +   E+  V   LDL TG+G + + +    P  + 
Sbjct: 122 FHVDERVIVPRSFFAELLEEGMAPWVEDPEQ--VSSALDLCTGSGCLAILMAHAFPNAQI 179

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
           VGVD+S  AL++A  N    G+ +R + ++SD F +++G  FD I+SNPPY+ +  +  L
Sbjct: 180 VGVDLSDDALDVAAENVADYGLEDRVELVKSDVFDALDGRRFDFILSNPPYVTADAMASL 239

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E    +PR++L  G DGL   R +      HL   G  +VE+G+N +  V   F    
Sbjct: 240 PPEYL-HEPRMALAAGDDGLDVVRRLLAQARDHLTPKGFLAVEVGHN-RDIVEAAFPELS 297

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              ++     GG+D + L  R
Sbjct: 298 FTWLSCR---GGDDMIFLLHR 315


>gi|119025460|ref|YP_909305.1| methylase protein [Bifidobacterium adolescentis ATCC 15703]
 gi|118765044|dbj|BAF39223.1| possible methylase protein [Bifidobacterium adolescentis ATCC
           15703]
          Length = 306

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 67/283 (23%), Positives = 108/283 (38%), Gaps = 24/283 (8%)

Query: 3   ALRDSHSFLCRVTG-----LSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIH 52
              D+   L          +    ++ D    L +++            + R +K E + 
Sbjct: 23  PQHDAKLLLAEAFHTDLQHVDKAMLMGDGVERLAEKEDAEPAMERFQTMLARRVKREPLQ 82

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I G   F  + L +    F PRPETEL+V   + ++      R   +++DL  G+GA+ 
Sbjct: 83  HITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKVVDLCAGSGAIG 140

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVE 162
           LA   E P  +   V+ S    E    N             N   +  D  Q    S ++
Sbjct: 141 LAFASEVPGSEVWAVEKSATTAEWTWRNLDETAKRYPAIAGNYHLDIADATQMPTLSQLD 200

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDG 221
           G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I    ++ L   G
Sbjct: 201 GTIDIVLTNPPYVPLADIPE-QSEVRDYDPDLALYGGSADGTLIPERIIARAAKLLRAGG 259

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L  +E    Q   +     +     V    DY G  R L   +
Sbjct: 260 LMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYLTAEK 302


>gi|152979006|ref|YP_001344635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus succinogenes 130Z]
 gi|150840729|gb|ABR74700.1| modification methylase, HemK family [Actinobacillus succinogenes
           130Z]
          Length = 314

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            D+ L   ++  +   +   L K   +  ++    F  +   +      PR     L+ S
Sbjct: 72  FDTNLTPSEKQLIVGLVAERLAKRIPVAYLVNSAWFCGLEFYVDERVIIPRSPISALIQS 131

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                L    K    RILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 132 NFNGLLSHTPK----RILDLCTGSGCIAIACAHVFPQAEVDAVDLSFDALNVAEINIERH 187

Query: 145 GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   LQSD F ++    +D+IV+NPPY++   +  +  E R  +P ++L  G DGL
Sbjct: 188 NMLHRVFPLQSDLFENLPQDQYDLIVTNPPYVDLEDLSDMPQEFR-HEPELALGSGADGL 246

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
              + I    + +L+ DG+   E+G N  V +   +       V 
Sbjct: 247 DITKRILAQAADYLSDDGILVCEVG-NSMVHLTEQYPEVPFNWVE 290


>gi|237797646|ref|ZP_04586107.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020496|gb|EGI00553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 302

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRIPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDERVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY++S  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDSED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGNDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|183220544|ref|YP_001838540.1| modification methylase HemK [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910654|ref|YP_001962209.1| polypeptide chain release factor methylase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775330|gb|ABZ93631.1| Methylase of polypeptide chain release factors [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778966|gb|ABZ97264.1| Modification methylase HemK [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 295

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 5/264 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   L  +  L   ++    +  L  ++       IV   K + +  I G + F+
Sbjct: 26  NPRVDAEWILSDLLNLPRIKLYSQFEMPLSQKEIDLYRERIVERSKRKPVAYITGKKGFH 85

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                +S D   PRPETE LVD         R E  D  +I DL +G+G + L+L +   
Sbjct: 86  QFEYLVSEDVLIPRPETEELVDFLFKQKETLRTEFPDGFQIWDLCSGSGCIGLSLSQLLE 145

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
               V  DIS +A++ +K+NA    ++       S+   S+     FD+IVSNPPYI   
Sbjct: 146 PKAVVLSDISEEAIQQSKANAEKYQLTG-IQFYVSNLDESLPNHLRFDIIVSNPPYIPDS 204

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  +V D++P ++L    D +  +R +     + L   G   +E   N   ++  +
Sbjct: 205 EKKDIMPDVLDYEPHLALFV-SDIIEFHRALFLSAKQRLKPGGWFLMETHPNYIHELESL 263

Query: 239 FESRKLFLVNAFKDYGGNDRVLLF 262
             S          D    +R L  
Sbjct: 264 AISLGFVSERRILDSSNKERFLFL 287


>gi|154486887|ref|ZP_02028294.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis
           L2-32]
 gi|154084750|gb|EDN83795.1| hypothetical protein BIFADO_00720 [Bifidobacterium adolescentis
           L2-32]
          Length = 306

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 67/283 (23%), Positives = 109/283 (38%), Gaps = 24/283 (8%)

Query: 3   ALRDSHSFLCRVTG-----LSSHQVIVDPDSVLDDRQ-----RFFLTNAIVRSLKHESIH 52
              D+   L          +    ++ D    L +++            + R +K E + 
Sbjct: 23  PQHDAKLLLAEAFHTDLQHVDKAMLMGDGVERLAEKEDAEPAMERFQTMLARRVKREPLQ 82

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I G   F  + L +    F PRPETEL+V   + ++      R   +++DL  G+GA+ 
Sbjct: 83  HITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWATRNGMYR--AKVVDLCAGSGAIG 140

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFSSVE 162
           LA   E P  +   V+ S    E  + N             N   +  D  Q    S ++
Sbjct: 141 LAFASEVPGSEVWAVEKSATTAEWTRRNLDETAKRYPAIAGNYHLDIADATQMPTLSQLD 200

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDG 221
           G  D++++NPPY+    +     E RD+DP ++L GG  DG      I    ++ L  DG
Sbjct: 201 GTIDIVLTNPPYVPLADIPE-QPEARDYDPDLALYGGSADGTLIPERIIARAAKLLRADG 259

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L  +E    Q   +     +     V    DY G  R L   +
Sbjct: 260 LMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYLTAEK 302


>gi|148269572|ref|YP_001244032.1| HemK family modification methylase [Thermotoga petrophila RKU-1]
 gi|147735116|gb|ABQ46456.1| modification methylase, HemK family [Thermotoga petrophila RKU-1]
          Length = 282

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 124/265 (46%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            + +    + RV G+    + +  D V+   +   +   + +      +H ILG ++F  
Sbjct: 32  PVLEVLLIVSRVLGIRKEDLFL-KDLVVSPTEEKRILKLVEKRASGYPLHYILGEKEFMG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 91  LSLLVEEGVFVPRPETE----ELVELALELIRKYGIKAVADIGTGSGAIGVSVAK-FSDV 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+E+A+ NA  +GVS+RF   + +     +  F   ++I+SNPPY++S  
Sbjct: 146 VVFATDVSSKAVEVARKNAERHGVSDRFFVRKGELLEPFKEKFASIEMILSNPPYVKSS- 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +  +EIG +Q  ++ +I 
Sbjct: 205 -AHLPKDVL-FEPAEALFGGEDGLDFYREFF---GRYNTSGKIVLMEIGEDQVEELKKI- 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R L   R
Sbjct: 259 ----VSDAVFLKDSAGKYRFLFLNR 279


>gi|86608445|ref|YP_477207.1| HemK family methyltransferase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556987|gb|ABD01944.1| methyltransferase, HemK family [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 247

 Score =  218 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 5/222 (2%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  +   +  +LG  ++  + L ++     PRPETELLV+ A +  L            
Sbjct: 21  QRVEERIPLQYLLGKVEWAGLSLRVTPAVLIPRPETELLVEQA-SLWLQANPLPPGSCFA 79

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---S 159
           DLGTG+GA+ +AL  + P  + + VD S +AL +A  N V + + ER + L   WF    
Sbjct: 80  DLGTGSGAIAIALAHQHPQLRLLAVDSSPEALAVAADNVVAHHLQERVNLLLGSWFVPLD 139

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
              G    +VSNPPYI S  +  L  EVR  +PR +LDGG DGL+H R +      +L  
Sbjct: 140 PWRGRLRGLVSNPPYIPSADLASLMPEVRLHEPRQALDGGEDGLAHLRLLIQAAPDYLAP 199

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVL 260
           +   +VE+   Q   V    ++R     +   +D  G +RV+
Sbjct: 200 NSFWAVEVMRGQAPWVAEQLQARSCYRQIQVHRDLAGVERVV 241


>gi|170288248|ref|YP_001738486.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotoga sp. RQ2]
 gi|170175751|gb|ACB08803.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Thermotoga sp. RQ2]
          Length = 282

 Score =  218 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            + +    + RV G+    + +  D V+   +   +   + +      +H ILG ++F  
Sbjct: 32  PVLEVLLIVSRVLGIRKEDLFL-KDLVVSPTEEKRILKLVEKRASGYPLHYILGEKEFMG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 91  LSLLVEEGVFVPRPETE----ELVELALELIRKYGIKAVADIGTGSGAIGVSVAK-FSDV 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+E+A+ NA  +GVS+RF   + ++    +  F   ++I+SNPPY++S  
Sbjct: 146 VVFATDVSSKAVEVARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSS- 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +  +EIG +Q  ++ +I 
Sbjct: 205 -AHLPKDVL-FEPAEALFGGEDGLDFYREFF---GRYNTSGKIVLMEIGEDQVEELKKI- 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R L   R
Sbjct: 259 ----VSDAVFLKDSAGKYRFLFLNR 279


>gi|126657233|ref|ZP_01728399.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110]
 gi|126621504|gb|EAZ92215.1| protoporphyrinogen oxidase [Cyanothece sp. CCY0110]
          Length = 301

 Score =  218 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 6/234 (2%)

Query: 37  FLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
            L+    R +K    +  ++G   +    L +S D   PRPETEL++D AL         
Sbjct: 67  KLSQLWQRRVKERVPLQYLVGMTPWRRFSLKVSPDVLIPRPETELIIDFALKAVQHSPNP 126

Query: 96  R-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                  +DLGTG+GA+ L L    P      VD S +AL IA+ NA+  G S +    Q
Sbjct: 127 HLSSGHWVDLGTGSGAIALGLADSFPQATIHAVDTSIEALTIAQENALKEGFSSQIHLYQ 186

Query: 155 SDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             W++ ++   G    +VSNPPYI + ++  L  EV++ +P ++LDGG +G      + D
Sbjct: 187 GSWWTPLQHLQGQVSAMVSNPPYIPTSLLSQLQPEVKEHEPILALDGGHEGFDAINYLID 246

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +L   G+  VE+   Q   + ++  ES +   +N   D  G  R  L  R
Sbjct: 247 TSPNYLISGGIFLVEMMAGQGEKISKLLQESSRYQDINLLPDLAGIARFALAYR 300


>gi|300724039|ref|YP_003713354.1| N5-glutamine methyltransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297630571|emb|CBJ91236.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus nematophila ATCC 19061]
          Length = 311

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 15/255 (5%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S ++ +D PDS+    L   +R  +   ++R +     +  ++    F      +   
Sbjct: 50  LPSLRLPMDVPDSMMASRLTSTERQRIVELVLRRINERVPVAYLINRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+   +      +       ILDL TG+G + +A        +   VDIS
Sbjct: 110 VLIPRS----LIRDVIENRFEGLISHQPSTILDLCTGSGCIAIACAHAFSEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +S R   ++SD F  +    +D+I +NPPY++   +     E  D
Sbjct: 166 PDALAVAEINIENHKLSHRVIPIRSDLFHDIPSVKYDIIATNPPYVDEEDMSDFPQEY-D 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P +++  G+DGL   R I       L +DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELAMAAGVDGLDLVRRILATAPDFLAEDGILVCEVG-NSMVHLIEQYPDVPFKWLTF 283

Query: 250 FKDYGGNDRVLLFCR 264
             DYG  D V +  R
Sbjct: 284 EHDYG--DGVFVLTR 296


>gi|73667468|ref|YP_303484.1| modification methylase HemK [Ehrlichia canis str. Jake]
 gi|72394609|gb|AAZ68886.1| Modification methylase HemK [Ehrlichia canis str. Jake]
          Length = 280

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 5/260 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD    +  +    S   I+DP   +D          I +   +  +  I+G R+F+
Sbjct: 22  NPKRDVEIIIKHLIDTKSLVTILDPYMSVDKCDVEMFWKMIKQRAANVPVSHIIGRREFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +++D  +PRP++E ++ S LA       K   + I D GTG+G +   LL +   
Sbjct: 82  STEFIVNADVLDPRPDSETIISSVLAM---YPCKNRRLVIGDFGTGSGCLLAVLLLKYRN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+ ++ S KA  +A  N   + +S R     S W  +   +FD+IVSNPPYI+   + 
Sbjct: 139 AVGIAIEKSVKAYRVAYQNFKNHQLSSRVKLRLSSW-DNCYDVFDLIVSNPPYIKRSKIA 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+ ++P I+L+GG  GL  Y  I   + R L K+G+  +EIG +Q   + RI   
Sbjct: 198 KLQPEVKLYEPMIALNGGPVGLEIYLQIFLVIKRCLKKNGVAILEIGEDQ-HQIHRIVHK 256

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
             L       D  G  R ++
Sbjct: 257 YGLKFCTYHNDLSGKLRCIV 276


>gi|218289203|ref|ZP_03493438.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240551|gb|EED07731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 266

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 8/233 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A R++   +    G    +++      + D             ++ E +  +LG +DFY 
Sbjct: 37  AEREAEQIVAHALGWDRVRLLQSLGDEVPDEIAERAARLAALRVQGEPLAYVLGKQDFYG 96

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +  D   PRP+TE+LV+ A+ F           R++D+GTG+G + +++    P  
Sbjct: 97  RTFEVGPDCLIPRPDTEVLVEEAIRFLK---RMPSGTRVIDVGTGSGCIAVSIALACPGV 153

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
               VD+S  AL +A+ NA   G    +   D ++     +  G  +  IVSNPPYI + 
Sbjct: 154 SVTAVDLSVDALAVARRNAERLGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTS 213

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYN 230
            +D L   VRD++PR++LDGG DGL  YR IA      L +      +E+G+N
Sbjct: 214 EIDQLEPSVRDYEPRLALDGGEDGLQFYRRIAALPPYVLARGRAGVFLEVGHN 266


>gi|118474800|ref|YP_891733.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus
           82-40]
 gi|118414026|gb|ABK82446.1| bifunctional methyltransferase [Campylobacter fetus subsp. fetus
           82-40]
          Length = 261

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 15/258 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + S +          + +  +  LD    F +   + R    E +  I    DF +    
Sbjct: 19  AFSLMGFHLKKDREWIFLHKEDKLDFVDEFLI--LLDRYKNGEPLQYITRSCDFLDYEFE 76

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PR ETE+LV   ++ +    +  + + I ++G G+G + ++L K     K   
Sbjct: 77  VGRGVLVPRYETEILVQKVVSIA----KNLENISICEIGIGSGVISISLAKILKNCKFTA 132

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  AL+ A+ N    GV  + +   + +   VEG FD+IVSNPPYI       L   
Sbjct: 133 TDISEDALKYARKNISKFGV--QIELFNTSFLDGVEGDFDIIVSNPPYIAKDYK--LDKW 188

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V   +P  +L GG  G    + I +              E+GY+QK  +    E      
Sbjct: 189 VMS-EPSQALFGGEKGDEILKKIVNLAKDRTK---FLVCEMGYDQKASLSNELEKAGFKF 244

Query: 247 VNAFKDYGGNDRVLLFCR 264
              +KD  G DR  +  R
Sbjct: 245 -EFYKDLAGFDRGFVAYR 261


>gi|320333669|ref|YP_004170380.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus maricopensis DSM 21211]
 gi|319754958|gb|ADV66715.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus maricopensis DSM 21211]
          Length = 279

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 9/260 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+ + +    GL++  ++    + L+  +   L     R      +  +LG  ++ +V 
Sbjct: 29  HDARALVLHALGLTTAGLLTRI-TPLNAEEAATLEALAARREARVPLQHLLGSVEWGDVA 87

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++     PRPETE+L    L  +L  +       +LD+GTGTGA+ +A+    P    
Sbjct: 88  LRVTPAALVPRPETEVL----LHLALSALRGVPEPCVLDVGTGTGALAVAVAHARPDAHV 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S  AL +A+ NA  NG   R   L +D          ++VSNPPY+     +   
Sbjct: 144 TATDVSDDALALARENATRNGT--RVAFLHADLLHGAPTGLHLVVSNPPYLPDADRENAD 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV   DP ++L GG DGL   R +A     HL   G  ++E+       +     +   
Sbjct: 202 PEV-QHDPPLALYGGADGLDLARQLAAQAPAHLRPGGTLALELDPRNVHHLAAELRNAGW 260

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
                  D  G  R +   R
Sbjct: 261 S-ARVHDDLTGRARFITATR 279


>gi|217032254|ref|ZP_03437751.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128]
 gi|216946020|gb|EEC24633.1| hypothetical protein HPB128_142g2 [Helicobacter pylori B128]
          Length = 276

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L  ++       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEHLELTHKEEMCFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + ER    ++  +  +    +++VSNPPYI       L 
Sbjct: 139 HASDISPNALEVALKNIERFNLKERCFLKKTRLWDRMP-TIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|238853675|ref|ZP_04644043.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 202-4]
 gi|238833713|gb|EEQ25982.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Lactobacillus gasseri 202-4]
          Length = 280

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  + ++  D  L   Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DIDYVLGERLGYTPSEFLLHIDDELSLAQEKQALKDMKKLCRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG- 124
            ++     PR ETE LV  AL         +   +ILDLGTG+GA+ +AL+K++   K  
Sbjct: 83  LVNRGVLIPRFETEELVKLALENI------KSGEKILDLGTGSGAIMVALVKQAQDRKIE 136

Query: 125 ----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +   +  R  T +++    +E  FD I+SNPPYI++   
Sbjct: 137 NLILYASDITDAALRESEENFLKYDLDVR--TRKANVLVGLE-KFDTIISNPPYIKTSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D +   V   +P  +L GG DGL  YR  A  +  HL   G   +E G+++K  +  +FE
Sbjct: 194 DLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFFLEFGFSEKDQLKDLFE 253

Query: 241 SR-KLFLVNAFKDYGGNDRVLLFC 263
           +    F +    D  G  R++   
Sbjct: 254 AELPDFEIEFKNDLAGKPRMVHGR 277


>gi|223966751|emb|CAR93112.1| CG9531-PA [Drosophila melanogaster]
 gi|223966757|emb|CAR93115.1| CG9531-PA [Drosophila melanogaster]
 gi|223966759|emb|CAR93116.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|253689188|ref|YP_003018378.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755766|gb|ACT13842.1| modification methylase, HemK family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 310

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   ++  +   I R  +   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDIPEDMYTSRLITSERQRIVERVIRRVNERIPVAYLTNKAWFCGLEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNYFDEQLPKAPN----HILDLCTGSGCIAIACAQAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+  R   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SDALAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 FEPELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG-NSMVHLIEQYPEIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFC 263
             D  G D V +  
Sbjct: 284 --D-NGGDGVFMLT 294


>gi|261368037|ref|ZP_05980920.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile
           DSM 15176]
 gi|282570025|gb|EFB75560.1| protein-(glutamine-N5) methyltransferase [Subdoligranulum variabile
           DSM 15176]
          Length = 276

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 14/265 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+      VT           D    D +   L     R    E +  +LG  DF 
Sbjct: 19  DARFDAAQLYRFVTRRDP-----RLDDGPTDAEAARLDVLATRRAAREPLQYLLGEWDFL 73

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +      PR ++E++ ++A+      +       +LDL  GTG + L + +  P 
Sbjct: 74  DFTLKVGPGVLCPRADSEVVCETAIEL----LRNVPHPTVLDLCAGTGCLGLGVARAYPD 129

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
            +   V+ S  A    ++N +  GV   R D     W+ ++     D+I+SNPPY+ +  
Sbjct: 130 ARVTCVEKSGDAWPYLQANTMDTGVETVRADVF--SWYRTLAPESVDLILSNPPYLTAGE 187

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +P ++LDGG DGL  YR +       L   G   +EIG  Q   V+ + 
Sbjct: 188 MRALMPET-SHEPAMALDGGTDGLDFYRLLCARYKAALRPGGWLVLEIGCAQAAQVLALG 246

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                      KDYGGNDRV++  +
Sbjct: 247 GQYGWQNGRCRKDYGGNDRVVVLQK 271


>gi|229496958|ref|ZP_04390663.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas endodontalis ATCC 35406]
 gi|229316060|gb|EEN81988.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas endodontalis ATCC 35406]
          Length = 294

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 13/271 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L  +  LS  Q+++  +  LD+ Q      A+ R L HE I  ILG   F 
Sbjct: 24  EARSLVRILLEEILHLSRTQLLMASERPLDEGQEGQCWEAVRRLLHHEPIQYILGHAPFG 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETE L  + +     R + +  VRILDLGTG+G + L L +  P 
Sbjct: 84  PLDLFVAPGVLIPRPETEELCSTIVE----RHKGQKGVRILDLGTGSGCIALYLAQRLPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +   ++ S +A  IA+ N   +G+        R D L+   ++S     D+IVSNPPYI
Sbjct: 140 SEVFALEKSDQAATIARRNFDRSGLGSSTPQLLRGDMLEVGSWASSLPPLDIIVSNPPYI 199

Query: 176 ESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
           +      +   V + +P ++L     D L  YR I    +R  +       +E+      
Sbjct: 200 QLSEAVTMEPHVLEHEPHLALFAPEADPLLFYRAICQLAARLPMQSSAHIYLELNALLAE 259

Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDRVLLFC 263
           D + IF      L  +   D  G  R L   
Sbjct: 260 DTLAIFAEAPHILSASLLPDLSGKSRFLTAT 290


>gi|303258045|ref|ZP_07344053.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderiales bacterium 1_1_47]
 gi|302859064|gb|EFL82147.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderiales bacterium 1_1_47]
          Length = 301

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDF 60
               ++   + R   +         D+ L   +R  + N I R     E    I      
Sbjct: 38  NPEEEAAFLVLRTLRIPLEYEEKFLDATLTGNERETVLNNISRRCDDLEPTAYITKEWWL 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L++      LP  +   +  ILD+ TG+G + + L ++ P
Sbjct: 98  TGFPFYVDERVLIPRSYIAELIEKNFDGLLP--DPARIHSILDMCTGSGCLAILLAEKFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +   VDIS  ALE+A+ N        R   +QSD F +++   +D+I+SNPPY+    
Sbjct: 156 QAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFENLQNTKYDLIISNPPYVTEAS 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  E R ++P ++L  G DG+     +   V  HLN +G+  VE+G +   +    F
Sbjct: 216 MEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLNDNGVLIVELG-DGAENFKERF 273

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     V      GG D+V +  +
Sbjct: 274 PN---IEVTWLPTSGGKDQVFMIKK 295


>gi|119944775|ref|YP_942455.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychromonas ingrahamii 37]
 gi|119863379|gb|ABM02856.1| adenine-specific modification methylase in HemK family protein
           [Psychromonas ingrahamii 37]
          Length = 303

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVDP-----DSVLDDRQRFFL-TNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D      D+ L  R+R  L    IVR  K   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDSKPTILDARLTRREREMLVDRIIVRIEKRIPVAYLTNKAWFAGLEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+++  A  + +  K    RILDL TG+G + +A     P  +   VDIS
Sbjct: 110 TLVPRSPIAELIEAHFAPWVDKAPK----RILDLCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL++A+ N   +G+ ++   +QSD FS +E   +D+IVSNPPY+++  +D L  E + 
Sbjct: 166 EDALDVAEINIQGHGLEQQVFPIQSDLFSGIENEKYDLIVSNPPYVDAQDMDNLPGEYK- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R +    S  LN++G+  VE+G +Q V +   +       +  
Sbjct: 225 HEPELGLACGADGLDLVRKMLSQASSKLNEEGVLFVEVGNSQ-VHLQEAYPDIPFTWIEF 283

Query: 250 FKDYGGNDRVLLFCR 264
                G   V +  +
Sbjct: 284 E---AGGHGVFVLTK 295


>gi|24582226|ref|NP_609031.2| CG9531 [Drosophila melanogaster]
 gi|7297118|gb|AAF52386.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score =  218 bits (556), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|303327274|ref|ZP_07357716.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. 3_1_syn3]
 gi|302863262|gb|EFL86194.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio sp. 3_1_syn3]
          Length = 283

 Score =  218 bits (556), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 7/261 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +      V GL     ++  +  L   Q   L     R    E + +ILG R+F+     
Sbjct: 26  AQLLAGHVLGLDRLHCVLAAERELTPDQAGTLEALTARRATGEPLAQILGGREFFGRTFL 85

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ DT  PRPETELLV++AL      +     +R  DLG G+G + + L  E P + G+ 
Sbjct: 86  VTPDTLIPRPETELLVETALEL----LPAGQPLRFADLGAGSGCIGVTLCLERPRWCGLL 141

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           +++S  ALE+A++NA   G + R D L++D  +     G  D++VSNPPYI       + 
Sbjct: 142 LELSAPALEVARANAARLGAATRLDALRADLRAIPLAGGSCDLLVSNPPYIADAERGQVM 201

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EV  F+P  +L     GL+H R +    +R L   GL  +E G +Q   V  +  +   
Sbjct: 202 DEVLRFEPHSALFSPEAGLAHLRAVIAQAARLLRPGGLLLLEHGADQGKAVRDLLSAGDA 261

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   +D  G +R  L  +
Sbjct: 262 FVGIATRRDLAGLERCALARK 282


>gi|330876113|gb|EGH10262.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 302

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  +N  +  GG+
Sbjct: 267 PEVDFAWLNFKR--GGH 281


>gi|27819756|gb|AAL29142.2| SD04586p [Drosophila melanogaster]
          Length = 328

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 66  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 125

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 126 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 181

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 182 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 241

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 242 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 301

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 302 KYEGRLKFIAGYSDQYQRERFV 323


>gi|225374518|ref|ZP_03751739.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM
           16841]
 gi|225213756|gb|EEG96110.1| hypothetical protein ROSEINA2194_00133 [Roseburia inulinivorans DSM
           16841]
          Length = 164

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 2/161 (1%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+ TG+G + +++L      KG  VDIS +A+ +AK NA  N V   F+  +SD F 
Sbjct: 2   KVLDMCTGSGCIIISILHNVEGVKGYAVDISKQAVNVAKENAKLNEVPVLFE--RSDLFE 59

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V   FDVIVSNPPYI + ++  L  EV+ F+P  +LDG  DGL  YR I +    +LN 
Sbjct: 60  MVTEKFDVIVSNPPYIPTDVIPQLMPEVQVFEPVEALDGKEDGLYFYRKIVEQSRDYLNP 119

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G    EIGY+Q  DV  +        V   KD  GNDRV+
Sbjct: 120 GGYLMFEIGYDQGKDVSEMMTDAGFSDVCVKKDLAGNDRVV 160


>gi|320538354|ref|ZP_08038232.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis
           F0421]
 gi|320144798|gb|EFW36536.1| protein-(glutamine-N5) methyltransferase [Treponema phagedenis
           F0421]
          Length = 300

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 14/273 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  DS   L  + G     ++  PD+ +   Q     N I +      +  + G +DF+ 
Sbjct: 30  ASLDSDVLLSSLLGKERSWLLAHPDADVSAIQ-SSFKNLIEKRCSGIPVAYLTGKKDFFQ 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     P+P+TELLV+  L     R      + +L+  TG+G V +++LKE    
Sbjct: 89  SSFYVTPAVLIPKPDTELLVEQTLEAIRER-SNSSPLSLLEPCTGSGCVVISVLKELEKI 147

Query: 123 KGV-----GVDISCKALEIAKSNAVTN------GVSERFDTLQSDWFSSVEGLFDVIVSN 171
                     DIS +AL +AK NA          +   F     + FS +   +D+I SN
Sbjct: 148 GITNITTSAFDISNEALAVAKKNAENLLSPKMRDLLSFFRFNLQESFSRLGTAYDIIFSN 207

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+ + +   L  + R  +P I+LDGG +GL   + +A+     L ++G+   E+    
Sbjct: 208 PPYVPTEMARLLLQDGRK-EPFIALDGGAEGLDFIQALANNSYVVLKRNGMLLSEVDEYH 266

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                 I        V   KD+   DR++   +
Sbjct: 267 ANQAADILIKAGFSSVTIHKDFNLQDRLVTGIK 299


>gi|116811579|emb|CAL25956.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|251788964|ref|YP_003003685.1| modification methylase, HemK family [Dickeya zeae Ech1591]
 gi|247537585|gb|ACT06206.1| modification methylase, HemK family [Dickeya zeae Ech1591]
          Length = 310

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L++   A 
Sbjct: 68  LTSSERHRIVERVIRRVNERVPVAYLTNKAWFCGLEFYVDERVLVPRSPIGELINQQFAS 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP         ILDL TG+G + +A  +  P  +   VDIS  AL + + N   +G+  
Sbjct: 128 ILPH----PPRHILDLCTGSGCIAIACAQAFPEAEVDAVDISADALAVTEQNIQQHGMEY 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F  +    +D+IV+NPPY++   +  L  E R F+P + L  G DGL   R
Sbjct: 184 NVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEPELGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L ++G+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RILACAPDYLAEEGVLICEVG-NSMVHLMEQYPDIPFTWLEF--D-NGGDGVFMLTR 295


>gi|288562706|gb|ADC53569.1| FI13095p [Drosophila melanogaster]
          Length = 328

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 66  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 125

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 126 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 181

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 182 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQ 241

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 242 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 301

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 302 KYEGRLKFIAGYSDQYQRERFV 323


>gi|289209006|ref|YP_003461072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thioalkalivibrio sp. K90mix]
 gi|288944637|gb|ADC72336.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thioalkalivibrio sp. K90mix]
          Length = 306

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 66/251 (26%), Positives = 100/251 (39%), Gaps = 8/251 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDF 60
            A  ++   +     L          S L + +R  +   +  R    +    + G   F
Sbjct: 45  NAFDEAAWLVLHTLHLPLDLPESWWSSNLSEAERTRVIAVLRTRIETRKPAAYLTGEAWF 104

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+        P IE   V R+LDL TG G + +A     P
Sbjct: 105 AGLPFFVDEHVLVPRSPLAELIAVGFE---PWIEAASVERVLDLCTGGGCIGIATALALP 161

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
             +    D+S  AL +A  N   + V +R     SD   ++  E  +D+IVSNPPY+++ 
Sbjct: 162 QAQVDLSDVSEPALAVAARNIERHDVGDRVQVRHSDVLDALGPEDRYDLIVSNPPYVDAR 221

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +P + L  G DGL   R I     RHL +DG   VE+G +Q   V   
Sbjct: 222 DMAELPQEYR-HEPELGLAAGEDGLDIVRRILADARRHLTEDGALIVEVGNSQ-PAVEEA 279

Query: 239 FESRKLFLVNA 249
           F    L  +  
Sbjct: 280 FPDLPLIWLEF 290


>gi|319893068|ref|YP_004149943.1| Methylase of polypeptide chain release factors [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162764|gb|ADV06307.1| Methylase of polypeptide chain release factors [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323463877|gb|ADX76030.1| methyltransferase, HemK family protein [Staphylococcus
           pseudintermedius ED99]
          Length = 280

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 105/259 (40%), Gaps = 12/259 (4%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
             F+      S   +I++  + + +     L + + + L    +  ++G  +FY  +  +
Sbjct: 25  QWFMMDTLQWSRTSLILNEMTPIAESTLKQLNDGLSQLLTGMPVQYVVGQSEFYGRQFKV 84

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +SD   PRPETE +V   L              + D+G G+GA+ + L  E P  + +  
Sbjct: 85  NSDVLIPRPETEEVVHYFLTQLAA------AKVVADIGVGSGAIAITLKAERPELRVIAT 138

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLG 184
           DIS +AL +A+ NA           LQ +    +   +   D ++SNPPYI       + 
Sbjct: 139 DISFQALAVARENAQRLQRD--ITFLQGNALQPLIDQDVRLDGLISNPPYIGEHERTLMD 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES-RK 243
             V  ++P ++L    +G   Y  I   +   +        EIG+ Q   + R+ +    
Sbjct: 197 NSVIQYEPHVALFAAQEGYQVYAAILRDLPHVMQDGAPVVFEIGFQQGAQLTRMMQQLYP 256

Query: 244 LFLVNAFKDYGGNDRVLLF 262
                   D  G+ R+  F
Sbjct: 257 HITPEVINDINGHARIFHF 275


>gi|328957994|ref|YP_004375380.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4]
 gi|328674318|gb|AEB30364.1| glutamine methylase of release factor 1 [Carnobacterium sp. 17-4]
          Length = 282

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      S   +++  +  +    +  L   +        I ++LG+  FY+ +  
Sbjct: 28  AEILLRERLNWSKTDIMMHLNEEMPSDVKHQLLQDVSNHGSGIPIQQLLGYCWFYDRKFK 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ DT  PRPETE +VD  L  S           +LD+GTGTG + + + KE P F+   
Sbjct: 88  VTKDTLIPRPETEEIVDIFLKSS----STEQKKTVLDIGTGTGIIGITIKKERPLFEVTA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGL 185
            DIS KAL++A+ NA       RF  L+ D    V+   FDVI+SNPPYI +  +  +  
Sbjct: 144 TDISSKALKVAQENATALEADVRF--LEGDLTDPVKTESFDVILSNPPYISNDEISYMDE 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V  ++P ++L    +GL+ Y+ +A  +   LN  G   +EIG+ Q   V  +F+    L
Sbjct: 202 SVLHYEPHLALFAENNGLAMYQRLAKELPTILNPGGEVFLEIGFKQGKKVQELFQEAFPL 261

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD  GNDR++
Sbjct: 262 AEVTIEKDMSGNDRLI 277


>gi|116811575|emb|CAL25954.1| CG9531 [Drosophila melanogaster]
 gi|116811577|emb|CAL25955.1| CG9531 [Drosophila melanogaster]
 gi|116811581|emb|CAL25957.1| CG9531 [Drosophila melanogaster]
 gi|116811585|emb|CAL25959.1| CG9531 [Drosophila melanogaster]
 gi|116811587|emb|CAL25960.1| CG9531 [Drosophila melanogaster]
 gi|116811595|emb|CAL25964.1| CG9531 [Drosophila melanogaster]
 gi|223966749|emb|CAR93111.1| CG9531-PA [Drosophila melanogaster]
 gi|223966755|emb|CAR93114.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score =  218 bits (555), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|91792893|ref|YP_562544.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella denitrificans OS217]
 gi|91714895|gb|ABE54821.1| modification methylase, HemK family [Shewanella denitrificans
           OS217]
          Length = 314

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++++  +   P +  + V R++DL TG+G + +A   
Sbjct: 97  AHFAGLEFYVDERVLVPRSPIAEMINNNFS---PWLYNKQVNRVMDLCTGSGCIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
                +   +DIS  ALE+A+ N  + GV +R   +QSD FSS+     +D+IVSNPPY+
Sbjct: 154 LFEDAEVDALDISEDALEVAQINIESLGVMDRVFPIQSDVFSSIPKGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    + +L +DG+  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAADYLTQDGVLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       V       G D V +  R
Sbjct: 272 MEQFPDVPFTWVEFE---CGGDGVFVLTR 297


>gi|116811583|emb|CAL25958.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|288800422|ref|ZP_06405880.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332635|gb|EFC71115.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella sp. oral taxon 299 str. F0039]
          Length = 281

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 7/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +         LS   ++ + D+ L   Q+  L     + L  E +  +L    F 
Sbjct: 19  EAKAIAKLVFEVAFNLSFTDILCNKDTQLSKEQQHKLQKITEQLLLGEPVQYVLQQAWFA 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                + S    PRPETE L         P +      +ILD+GTG+G + + L      
Sbjct: 79  GSWFKVHSGVLIPRPETEDLCYWIAEQ--PTLSSLSNPKILDIGTGSGCIAITLSLLIKN 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
            +    DI+ +AL +AK NA    ++   + ++ D  ++      +D+IVSNPPYI    
Sbjct: 137 AQTTAWDIAPEALSLAKENAKA--MNVSIEVVEQDALNAPCDNEKWDIIVSNPPYITPQE 194

Query: 180 VDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V  F+P  +L    D  L  Y+ I     + L + G    EI      ++  +
Sbjct: 195 QSEMEANVLQFEPNCALFVPEDNPLIFYKAITHYAQKALVQGGTLFFEINPLFVSEMKSL 254

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                   +    D  G +R +
Sbjct: 255 LAESGFTDIEVLIDRFGKERHV 276


>gi|116811589|emb|CAL25961.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDALKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|116811593|emb|CAL25963.1| CG9531 [Drosophila melanogaster]
 gi|223966745|emb|CAR93109.1| CG9531-PA [Drosophila melanogaster]
 gi|223966747|emb|CAR93110.1| CG9531-PA [Drosophila melanogaster]
 gi|223966761|emb|CAR93117.1| CG9531-PA [Drosophila melanogaster]
 gi|223966763|emb|CAR93118.1| CG9531-PA [Drosophila melanogaster]
 gi|223966765|emb|CAR93119.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEALKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|293399751|ref|ZP_06643897.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306151|gb|EFE47394.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 286

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 9/260 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +  +L  +T + +H + ++ +  +           + R +K E +  +LG+  FY  R  
Sbjct: 25  ALLYLLELTNMEAHNLYMEYEQEVPVDIAEQFEQGLCRLIKGEPLGHVLGFEWFYGYRFK 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV + LA +   +     V + D+GTG+GA+ ++L KE      + 
Sbjct: 85  VNEDVLIPRPETEELVANVLA-AYDEVFDGKQVTVADIGTGSGAIAISLKKEEDRLHMLA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS KA+ +AK              +  D    +       D+++SNPPYI +     +
Sbjct: 144 TDISEKAVMVAKE--NAAANEATVCFMVGDMLQPLIERNIKLDILISNPPYIPNEEK--M 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR- 242
              V D++P ++L GG DGL  YR I +   + LN+    + E+GY+QK  +  + +   
Sbjct: 200 ETCVVDYEPHVALFGGEDGLKFYRIIFENALKVLNEKAFMAFEMGYDQKERLTALAKEYF 259

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               +   +D  G +R+L  
Sbjct: 260 PEAKIEVLQDMSGKNRMLFI 279


>gi|296135886|ref|YP_003643128.1| modification methylase, HemK family [Thiomonas intermedia K12]
 gi|295796008|gb|ADG30798.1| modification methylase, HemK family [Thiomonas intermedia K12]
          Length = 324

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 7/259 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ALR +   L     +S H     P   L   Q   L   I R +  E I  + GW+ F  
Sbjct: 52  ALR-ALWLLAVGRPMSLHAAAETPLVALSAAQLETLDRLIERRVAGEPIAYLTGWQRFMG 110

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPF 121
           + L  S +   PR E+ELL   A        E       ++D+  G+G + LAL    P 
Sbjct: 111 LELRASPEALIPRAESELLGQIAAQKLRSMAEATATPPIVIDVCCGSGNLALALAHAVPQ 170

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            +  G DIS  A+++A++N     + +R      D  +      +G  D++VS PPYI +
Sbjct: 171 AQVHGADISQTAIDLARANTQNLDLGQRVSLHTGDLLAPFGAEFQGKVDLVVSLPPYIST 230

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +D +  E+   +P ++ DGG  G+     +       L   G   +E+G  Q   +++
Sbjct: 231 AKMDTMPHEIVGHEPHLAFDGGPFGVRILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQ 290

Query: 238 IFESRKLFL-VNAFKDYGG 255
           + E    +  V    D  G
Sbjct: 291 LLEKHPAYDRVETVCDAQG 309


>gi|227114798|ref|ZP_03828454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. brasiliensis PBR1692]
          Length = 310

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   ++  +   I R  +   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDIPEDMYTSRLITSERQRIVERVIRRVNERIPVAYLTNKAWFCGLEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNYFDEQLPKTPN----HILDLCTGSGCIAIACAQAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
            +AL + + N   +G+  R   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SEALAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 FEPELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG-NSMVHLIDQYPDIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFC 263
             D  G D V +  
Sbjct: 284 --D-NGGDGVFMLT 294


>gi|119476715|ref|ZP_01617025.1| probable DNA methylase [marine gamma proteobacterium HTCC2143]
 gi|119449971|gb|EAW31207.1| probable DNA methylase [marine gamma proteobacterium HTCC2143]
          Length = 311

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 10/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L   +R  L   I R ++    +  + G   F  +   + +    PR     L++  
Sbjct: 63  DAKLTLSERIALLALIERRVQERIPLPYLTGEAWFAGLLFKVDNRVLIPRSPIAELIEVG 122

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                P ++ ++V  ILDL +G G + +A        +   VD+S  AL++A  N     
Sbjct: 123 FE---PWLQHQEVFEILDLCSGGGCIGIACAHYFEEAQVSLVDLSAPALQVAVENIQRFE 179

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R   +QSD F+ + G  + +IV+NPPY++ V +  +  E    +P+++L  G DGL 
Sbjct: 180 LPHRVSVIQSDLFTGLVGRTYQLIVANPPYVDGVDLQTMPAEY-HHEPQLALGSGDDGLD 238

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I    + +L ++G+  VE+G N  V + + F       +   +  GG+  V +F R
Sbjct: 239 ITRRILQQSADYLTEEGILVVEVG-NSGVALEQAFAEVPFTWIEFER--GGHG-VFVFTR 294


>gi|269103134|ref|ZP_06155831.1| putative adenine-specific methylase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163032|gb|EEZ41528.1| putative adenine-specific methylase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 310

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  I     F  +   +      PR     L+++    
Sbjct: 68  LTSSERHRVVERVIRRINERTPVSYITNKAYFCGMEFFVDERVLVPRSPIGELIENRFEP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    K++  RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ +
Sbjct: 128 FL----KQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDISTDALAVAEQNIQDHGLEQ 183

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   L+SD    V + L+D+IV+NPPY++   +D L  E R  +P + L  G DGL   R
Sbjct: 184 QVTPLRSDLLRDVPKDLYDLIVTNPPYVDQEDMDNLPDEFR-HEPELGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L +DG+   E+G N  V +   +       +      GG+  V +  R
Sbjct: 243 RILSNAPNYLKEDGVLICEVG-NSMVHMEEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|258652313|ref|YP_003201469.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
 gi|258555538|gb|ACV78480.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
          Length = 298

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 15/269 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G+   ++ + P  +++          + R  +   +  + G      
Sbjct: 25  ADVDAQELAAHLMGVPRTRLGLTP--LVEQSFLTDYQALVERRAQRIPLQHLTGSVQLGR 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             + +    F PRPETE L+  AL      I   +   ++DL TG+G + LA+  E P  
Sbjct: 83  ATVAVGPGVFVPRPETESLLVWALH----AIAAVERPVVVDLCTGSGVLALAIAAERPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS-----SVEGLFDVIVSNPPYIE 176
           + +GV+ S  AL  A+ N    G    + +    D F       +EGL D++ +NPPY+ 
Sbjct: 139 RVIGVERSSAALAWARRNVTNAGAGRTKVELRGGDIFDERLLVDLEGLADLVTANPPYVP 198

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 +  EV D DP  ++  G DGL+  R +    +  L   G+ ++E   +    V 
Sbjct: 199 EGT--AVEPEVADHDPPEAVFAGPDGLAVIRPLLSVAASLLKLGGVLAIEHDDSHGETVP 256

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            +  SR+ L  V    D  G  R +   R
Sbjct: 257 ALLRSRRVLTDVEDHSDLAGRPRFVTATR 285


>gi|331000680|ref|ZP_08324332.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Parasutterella excrementihominis YIT 11859]
 gi|329570833|gb|EGG52548.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Parasutterella excrementihominis YIT 11859]
          Length = 299

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDF 60
               ++   + R   +         D+ L   +R  + N I R     E    I      
Sbjct: 36  NPEEEAAFLVLRTLRIPLEYEEKFLDATLTGNERETVLNNISRRCDDLEPTAYITKEWWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L++      LP  +   +  ILD+ TG+G + + L ++ P
Sbjct: 96  TGFPFYVDERVLIPRSYIAELIEKNFDGLLP--DPARIHSILDMCTGSGCLAILLAEKFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +   VDIS  ALE+A+ N        R   +QSD F +++   +D+I+SNPPY+    
Sbjct: 154 QAEVDAVDISSDALEVAEINIADYEFENRVYPIQSDLFENLQNTKYDLIISNPPYVTEAS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           ++ L  E R ++P ++L  G DG+     +   V  HLN +G+  VE+G +   +    F
Sbjct: 214 MEGLPQEYR-YEPSLALVAGADGMDIIDRLLKEVKAHLNDNGVLIVELG-DGAENFKERF 271

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     V      GG D+V +  +
Sbjct: 272 PN---IEVTWLPTSGGKDQVFMIKK 293


>gi|195053095|ref|XP_001993466.1| GH13055 [Drosophila grimshawi]
 gi|193900525|gb|EDV99391.1| GH13055 [Drosophila grimshawi]
          Length = 328

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  D   +  +  Q       +        +  I+G  DF ++ L  +
Sbjct: 66  IVSHVLKRKFNTVPDDFSQLKFNSAQLADFERFLEARCARMPLQHIIGEWDFMDITLKTA 125

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       ++ + V +L++G G+GA+ L++L   P  +   ++
Sbjct: 126 PTVFIPRPETEEFVRLVID----NYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIE 181

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ +RF+       +         +  +D+I+SNPPY+++    
Sbjct: 182 RSKAATALAWENAKLLGLQQRFEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQ 241

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D    HL   G   +E+G      V  I   
Sbjct: 242 YLHPEVVVYENLNALDGGSDGLRVARLVFDLACVHLRPGGKLWLELGNEHPPLVKTIMHL 301

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V +++D    +R +
Sbjct: 302 QYEGRLKFVQSYQDQYKRERFV 323


>gi|116811591|emb|CAL25962.1| CG9531 [Drosophila melanogaster]
          Length = 323

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|28869244|ref|NP_791863.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28852485|gb|AAO55558.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 302

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGLS  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLSLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFKR--GGH 281


>gi|307213045|gb|EFN88576.1| HemK methyltransferase family member 1 [Harpegnathos saltator]
          Length = 366

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/274 (22%), Positives = 108/274 (39%), Gaps = 23/274 (8%)

Query: 8   HSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              +  + G      V    +   +  Q   L +     L    +  I+G  DF ++ + 
Sbjct: 89  EHIVAHIVGTRKTLDVFNMRNDKFNASQIEELESLCECRLSRMPVQYIIGEWDFRDITVK 148

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L    F PRPETE+LVD  L          +   IL++G G+GA+ LAL       K   
Sbjct: 149 LVPPVFIPRPETEILVDFVLKRL--NSSPLENCEILEIGCGSGAISLALAHACKKIKCTA 206

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----------------VEGLFDVIV 169
           +D S  A ++  +N     + ++   + +                          FD +V
Sbjct: 207 IDASPHACDLTMTNRSQLNLMDQIAVIHATLKPDATVEVTSMSNGAGKMDLNSKQFDFVV 266

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPPY+ +  +  L  E++ ++   +LDGG DGL   + +    ++ L   G   VE+  
Sbjct: 267 SNPPYVPTKKILDLEPEIKIYEDLRALDGGDDGLKVIKPLLRYSAKALKPGGRLLVEVDS 326

Query: 230 NQKVDVV---RIFESRKLFLVNAFKDYGGNDRVL 260
                +      +   KL   + +KD+  NDR +
Sbjct: 327 THPEYIKFFTNKYSDLKLHYEHTYKDFCNNDRFV 360


>gi|77457946|ref|YP_347451.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens Pf0-1]
 gi|77381949|gb|ABA73462.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudomonas fluorescens Pf0-1]
          Length = 302

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +   L   + R ++       +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCALEDDELVNLQRLLKRRIEERIPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+++  A  +      +  RILDL TG+G + +A   E  
Sbjct: 93  CGMSFIVDERVLIPRSPIGELIENRFAPWI----GDEPARILDLCTGSGCIGIACAYEFQ 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +GV ER  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 NAEVVLADLSFEALEVANQNIERHGVDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELGLACGDDGLNLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  +   +  GG+
Sbjct: 267 PEVDFAWLEFER--GGH 281


>gi|326332908|ref|ZP_08199165.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
 gi|325949266|gb|EGD41349.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
          Length = 285

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 107/264 (40%), Gaps = 13/264 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  V     ++  +  D  + + +     + + R  + E +  + G   F +V L
Sbjct: 26  DAAILLAHVLDTDRNRRFLVDD--VAEHEEKAYADLLARRARREPLQHLTGVAYFRHVEL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL   A+     R    D   ++DL TG+GA+  ++  E P  +  
Sbjct: 84  AVGPGVFVPRPETELLAGWAID----RATAIDTPVVVDLCTGSGAIAKSIADEVPGAEVH 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            V++S  A   A  N    GV  R   + +D F+ + G  DV+V NPPYI     + +  
Sbjct: 140 AVELSEDAYPWAVRNLTGTGVDLRQGDM-ADAFADLHGGVDVLVCNPPYIPLEAWESVAR 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-----KVDVVRIFE 240
           E RD DP ++L  G DGL   R +    +  L   G+   E    Q           +F 
Sbjct: 199 EARDHDPDLALFSGQDGLDAIRVLERRAAELLRPGGVVGFEHADEQGPDGAGGGAPAVFS 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFC 263
           S      V    D  G  R     
Sbjct: 259 STGRWSDVRDHLDLAGRPRFTTAQ 282


>gi|331004960|ref|ZP_08328371.1| Site-specific DNA-methyltransferase [gamma proteobacterium
           IMCC1989]
 gi|330421236|gb|EGG95491.1| Site-specific DNA-methyltransferase [gamma proteobacterium
           IMCC1989]
          Length = 314

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 7/262 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  +S        GL         +  + + +   +    VR +        I G   F
Sbjct: 45  NAEDESFWLTFYALGLPFEADTSVLEQEITEAEWHQVNALFVRRVTERIPAAYITGEAWF 104

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                T++     PR     L+       L        +RILD+ TG G + +A     P
Sbjct: 105 CGYPFTVNQHVLVPRSPIAELILQQYQPWLSS-SADQPLRILDMCTGCGCIGIATALHMP 163

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
                  DIS +AL +A+ N   + + +R   +QSD FS +    +D+IV+NPPY++   
Sbjct: 164 EALVDVSDISTEALLVAQDNIQRHKLQDRVTAIQSDVFSGLPNSTYDLIVTNPPYVDKAD 223

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D +  E +  +P I+L  G DGL   R +    + +LN +G+  VE+G +   +V   F
Sbjct: 224 IDSMPAEYQA-EPAIALGSGDDGLDITRRLLKEAASYLNGNGVMIVEVGNSW-ENVEEAF 281

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
            +     +      GG+   ++
Sbjct: 282 PNVPFMWLGFE--SGGHGVFVI 301


>gi|15643254|ref|NP_228298.1| hemK protein [Thermotoga maritima MSB8]
 gi|4980999|gb|AAD35573.1|AE001726_7 hemK protein [Thermotoga maritima MSB8]
          Length = 282

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ +    + RV G+    + +  D  +   +   +   + +      +H ILG ++F  
Sbjct: 32  SVLEVLLIVSRVLGIRKEDLFL-KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMG 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 91  LSFLVEEGVFVPRPETE----ELVELALELIRKYGIKTVADIGTGSGAIGVSVAK-FSDA 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++I+SNPPY++S  
Sbjct: 146 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSS- 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +  +EIG +Q  ++ +I 
Sbjct: 205 -AHLPKDVL-FEPPEALFGGEDGLDFYREFF---GRYDTSGKIVLMEIGEDQVEELKKI- 258

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R LL  R
Sbjct: 259 ----VSDTVFLKDSAGKYRFLLLNR 279


>gi|261820752|ref|YP_003258858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium wasabiae WPP163]
 gi|261604765|gb|ACX87251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pectobacterium wasabiae WPP163]
          Length = 310

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 109/254 (42%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   ++  +   I R  +   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDIPEDMYTSRLITSERQRIVERVIRRVNERIPVAYLTNKAWFCGLEFYIDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     LP+        ILDL TG+G + +A  +  P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNYFDEQLPKAPN----HILDLCTGSGCIAIACAQAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+  R   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SDALAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 FEPELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG-NSMVHLIDQYPEIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFC 263
             D  G D V +  
Sbjct: 284 --D-NGGDGVFMLT 294


>gi|270284379|ref|ZP_05966016.2| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum
           DSM 20093]
 gi|270276760|gb|EFA22614.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium gallicum
           DSM 20093]
          Length = 365

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/300 (23%), Positives = 111/300 (37%), Gaps = 44/300 (14%)

Query: 6   DSHSFLCRVTGLSSHQVIV------------------------------DPDSVLDDRQR 35
           D+   L     +S   V +                              D  +  +    
Sbjct: 67  DAKLLLAHAAQVSLSDVDMARLMGRTLAQLQSQRNVTVSSDNTAAAFNTDCSTPHEPDAA 126

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
              T  + R    E +  I G   F  + L +    F PRPETE +V +AL +      K
Sbjct: 127 AQFTAMLARREAREPLQHITGHAPFRYLDLLVGPGVFVPRPETESVVQAALDWMDQHGMK 186

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-----VSERF 150
               R++DL  G+GA+ L++  E P      V++   A    + N    G     ++ R+
Sbjct: 187 SP--RVVDLCAGSGAIGLSVATEVPDSCVWAVEMDATAASWTRRNLDRVGATMPDLASRY 244

Query: 151 DTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLS 204
             +++D       + ++G  DV++SNPPYI    V     EVR++DP ++L GG  DG+ 
Sbjct: 245 RLMRADATCELTLADLDGTVDVVISNPPYIPEHDVPE-QTEVREYDPDMALYGGSADGMM 303

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               I       L   GL  +E   +Q V       +         +D  G  R L   +
Sbjct: 304 IPERIISRAWALLKPGGLLVMEHDISQPVRTRAFATAIGFSQAATHEDLTGRPRFLTAIK 363


>gi|328950556|ref|YP_004367891.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinithermus hydrothermalis DSM 14884]
 gi|328450880|gb|AEB11781.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Marinithermus hydrothermalis DSM 14884]
          Length = 276

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 8/263 (3%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    ++   L  +T   +    +     L       L   +   +  + +  ILG  +F
Sbjct: 20  LTPEAEAQQILRALTQEDAATFWLRRHEPLPQAVVHRLEAILRERVTRKPLQLILGTAEF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L ++     PRPETE LV+ AL      +  +   R+LD+GTG+GA+ LAL    P
Sbjct: 80  FGLVLKVAPGVLIPRPETEGLVELALEL----LRDQPAPRVLDVGTGSGAIALALKHARP 135

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D +  A+ +A+ NA   G++   + ++  + + + G F +IVSNPPY+     
Sbjct: 136 DAAVWATDTNPAAVALARQNAARLGLT--IEVVEGAFTAGLTG-FHLIVSNPPYLPEAYR 192

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                E   ++P  +L  G +GL   R +A      L   G  ++E+       +    E
Sbjct: 193 REAPPE-LAWEPPSALYAGPEGLDVLRPLARVAQAALEPGGWLALELSPTHAHTMAEELE 251

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +     V+  KD  G  R L   
Sbjct: 252 ALGFSSVSVRKDLAGRARYLTAR 274


>gi|254369814|ref|ZP_04985824.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122773|gb|EDO66902.1| hypothetical protein FTAG_01155 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 314

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 68  RLLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 128 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEDANITLVDISDDALAVANHNIKKHQLS 185

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   
Sbjct: 186 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEY-HYEPKLALEAGDDGLDLA 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        ++      G D V L  
Sbjct: 245 KRIILEADKYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWLSFVD---GGDGVFLLT 297


>gi|330961304|gb|EGH61564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 302

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEVADSYLDCRLEIDEISELQRLIRRRINERVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPERILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLTEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFKR--GGH 281


>gi|24374600|ref|NP_718643.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella oneidensis MR-1]
 gi|24349214|gb|AAN56087.1|AE015744_8 hemK family protein [Shewanella oneidensis MR-1]
          Length = 305

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 31  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 87

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +      P +  + V RILDL TG+G + +A   
Sbjct: 88  ARFAGLEFYVDERVLVPRSPIAEMIANRFG---PWLYGKPVNRILDLCTGSGCIAIACAY 144

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 145 EFDEAEVDALDISEDALDVAQVNVETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 204

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +   +  +  E    +P I L  G DGL   + I    +++L   G+  VE+G N  V +
Sbjct: 205 DEEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGILVVEVG-NSMVHL 262

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       VN      G D V +  R
Sbjct: 263 MEQFPEVPFTWVNFE---NGGDGVFVLTR 288


>gi|117923619|ref|YP_864236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Magnetococcus sp. MC-1]
 gi|117607375|gb|ABK42830.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Magnetococcus sp. MC-1]
          Length = 340

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 54/251 (21%), Positives = 110/251 (43%), Gaps = 3/251 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
           +   ++   L    G+   Q+       +   Q  ++   + + + + + ++ I G   F
Sbjct: 71  EPQWEAEYLLAHAMGMDLEQLERHKTQQVGPDQAAYMEALLQQRIEQRKPVNYITGEAWF 130

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR   E ++D            R + R+LDL TG+G + +      P
Sbjct: 131 AGHRFVVDERVLIPRSRIENVLDDPDGLLGLMEGARPLKRMLDLCTGSGCLAITAALHYP 190

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
           + +   VD+S  AL +A  N   + V+ER   ++S+ F  + G  +D+I++NPPY+ + I
Sbjct: 191 WLQVDAVDLSADALAVAAENVKRHRVTERVRLVRSNLFEKLTGACYDLILTNPPYVPTRI 250

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  E    +P+++L+ G DGL     I    + +L   G+   E+G + +  + + +
Sbjct: 251 YAGLAAEYHR-EPKMALEAGGDGLDLVIPILQQAAEYLEPGGILLCEVGDDTQEIMEQRW 309

Query: 240 ESRKLFLVNAF 250
               ++ +   
Sbjct: 310 PDLPVYWLQFH 320


>gi|33241450|ref|NP_876391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae TW-183]
 gi|33235958|gb|AAP98048.1| protoporphyrinogen oxidase [Chlamydophila pneumoniae TW-183]
          Length = 296

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  +  +SS   + D    + +         +    +      + G   F  +RL
Sbjct: 33  EALYILMDLLEVSSRAKLFDL-VGISETMLMEYRKRLALRGQRCPTAYLNGAVSFLGLRL 91

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + S    PR ETELL +  + + L   E   +    D+  G+G + LA+ K  P  + V
Sbjct: 92  RVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAIKKSCPHVEVV 148

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +A+ +A  NA +NG+      L  D  +      D  V NPPY+    +  +  
Sbjct: 149 LSDVCPQAVAVANENAKSNGLD--VKILLGDLSAPYTRPADAFVCNPPYLSFNEIIHIDP 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR ++P  +L GG  GL  Y+ IA  + + +   G+  +EIG +Q   +  IF    ++
Sbjct: 207 EVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESIKNIFSKHGIY 266

Query: 246 LVNAFKDYGGNDRVLLF 262
                +D  G DR+   
Sbjct: 267 G-RLHQDLSGRDRIFFL 282


>gi|31615726|pdb|1NV8|A Chain A, N5-Glutamine Methyltransferase, Hemk
 gi|31615727|pdb|1NV8|B Chain B, N5-Glutamine Methyltransferase, Hemk
 gi|31615728|pdb|1NV9|A Chain A, Hemk, Apo Structure
          Length = 284

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ +    + RV G+    + +  D  +   +   +   + +      +H ILG ++F  
Sbjct: 34  SVLEVLLIVSRVLGIRKEDLFL-KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMG 92

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 93  LSFLVEEGVFVPRPETE----ELVELALELIRKYGIKTVADIGTGSGAIGVSVAK-FSDA 147

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++I+SNPPY++S  
Sbjct: 148 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSS- 206

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +  +EIG +Q  ++ +I 
Sbjct: 207 -AHLPKDVL-FEPPEALFGGEDGLDFYREFF---GRYDTSGKIVLMEIGEDQVEELKKI- 260

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R LL  R
Sbjct: 261 ----VSDTVFLKDSAGKYRFLLLNR 281


>gi|167624580|ref|YP_001674874.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella halifaxensis HAW-EB4]
 gi|167354602|gb|ABZ77215.1| modification methylase, HemK family [Shewanella halifaxensis
           HAW-EB4]
          Length = 314

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 11/238 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   I+R ++    +  +     F  +   +      PR     L+ +  + 
Sbjct: 68  LTSSEKHKIVELIIRRVRERLPVPYLTNKAHFAGLEFYVDERVLVPRSPIAELIANRFS- 126

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P +  + V R+LDL TG+G + +A   E    +   +DIS  ALE+A+ N  T  V +
Sbjct: 127 --PWLYNKPVNRVLDLCTGSGCIAIACAYEFEDAEVDALDISVDALEVAQINIETLEVMD 184

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R   ++SD FS++     +D+IVSNPPY+++  +  +  E    +P I L  G DGL   
Sbjct: 185 RVFPMESDLFSAIPKGPHYDLIVSNPPYVDAEDIGDMPDEY-HHEPEIGLASGRDGLDLT 243

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + I    + +L +DGL  VE+G N  V +   F       VN      G D V +  R
Sbjct: 244 KRILANAADYLTEDGLLVVEVG-NSMVHLSEQFPDVPFTWVNFE---NGGDGVFILTR 297


>gi|294790652|ref|ZP_06755810.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Scardovia inopinata F0304]
 gi|294458549|gb|EFG26902.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Scardovia inopinata F0304]
          Length = 333

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 74/293 (25%), Positives = 111/293 (37%), Gaps = 32/293 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIV---------DPDSV-------LDDRQRFF--LTNAIVR 44
           A  +S   L    G+S   + +         D   V       + DRQ +       ++R
Sbjct: 41  ADHESKILLGSAFGVSLSDISLASIMGMSLNDLQPVGRCRANRIADRQAYADTFAATVIR 100

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRIL 102
              HE +  I+G   F  + + L    F PRPETE LV   L +   L +        ++
Sbjct: 101 RSHHEPLQYIVGHAPFRYIDVALGPGVFIPRPETETLVSLGLDYLAGLEQKNGELPFFVI 160

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT----------NGVSERFDT 152
           DL  G+G + L+LL E+   +   V+    AL   + NA                 + D 
Sbjct: 161 DLCAGSGVIGLSLLTENKQTQVYAVEKDQAALVWTEKNARRICQSSMTDPSRYRLLQADA 220

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIAD 211
                F+ V G  D++V+NPPY+    +    +EVRD+DP  +L GG  DGL     I  
Sbjct: 221 TDPSAFTDVNGTMDLVVTNPPYVPESEIPE-QVEVRDYDPPQALYGGSSDGLRIPEQIIL 279

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                L   G   +E   +Q   +               KD  G +R L   R
Sbjct: 280 RSFNLLKPGGCLILEHDPSQGSALRSFASDHGFCRAETVKDLNGRERFLTAFR 332


>gi|288803442|ref|ZP_06408874.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica D18]
 gi|288334052|gb|EFC72495.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica D18]
          Length = 275

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 10/271 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    G++   + +   + L       L   I+R  + E +  +LG   F 
Sbjct: 6   EAQAIVRLVLEVQFGITLTDIYMGKVNELSREAEEELEKIILRLERSEPVQYVLGRETFC 65

Query: 62  NVRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L   ++         ++    +++LD+GTG+G + + L  +
Sbjct: 66  GRTFHVAPGVLIPRPETEVLCRWIEEDYNRPYCALQPPMPLQVLDVGTGSGCIAVTLAAD 125

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPY 174
                    DIS  AL +A+ N   +    R +    D      S+++  FDVIVSNPPY
Sbjct: 126 LRNSAVTAWDISGDALLVARENV--HQWQVRVELKMEDVLHPSASAMQQKFDVIVSNPPY 183

Query: 175 IESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I       +   V  ++P  +L     D L  YR IA+   + L+ DG+   E       
Sbjct: 184 ICDKERTEMEGNVLAYEPETALFVPDDDPLRFYRAIAEYGVQALSADGVLYFETNPLYIN 243

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           DV  +  +     +   +D  G  R     R
Sbjct: 244 DVKEMLNTLGYKQIELREDQFGKLRFTKAIR 274


>gi|257465494|ref|ZP_05629865.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor 202]
 gi|257451154|gb|EEV25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor 202]
          Length = 315

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L +    V   S L D ++  + + I   L   + +  +     F
Sbjct: 48  NAWDEAQQLVLNALYLPADVPEVMYQSRLTDVEKTRVFHFIQERLGSRKPVAYLTNSSWF 107

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+       +P   K    RILD+ TG+G + +A     P
Sbjct: 108 CGLEFYVDERVIVPRSPIGELISHQFNGLIPTSPK----RILDMCTGSGCIAIACAVAFP 163

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VD+S  AL++A+ N   + +S R   + SD F+ +    +D+IV+NPPY++   
Sbjct: 164 EAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFNDIPQDKYDLIVTNPPYVDQED 223

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D +  E   F+P ++L  G DGL+  + I    + +L+ +G+   E+G N  V ++  +
Sbjct: 224 LDDMPEEF-HFEPELALGSGEDGLNITKRILAQAADYLSDNGVLVCEVG-NSMVHLMEQY 281

Query: 240 ESRKLFLVNA 249
            S     +  
Sbjct: 282 PSVPFNWIEF 291


>gi|332288130|ref|YP_004418982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330431026|gb|AEC16085.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 320

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 107/237 (45%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNA-IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L D ++  L +  I R    + +  +     F  ++  +      PR     L+      
Sbjct: 79  LTDIEKQKLLSLVIERIETRKPVAYLTHSAWFCGLQFYVDERVIIPRSPIGELIQDGFTG 138

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    + +  RILD+ TG+G + +A   + P  +   VDIS  AL +A+ N   + +  
Sbjct: 139 VL----RSEPKRILDMCTGSGCIAIACADKFPNAEIDAVDISLDALNVAEINIANHHLEH 194

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   LQSD F+++    +D+IVSNPPY+++  +  +  E    +P ++L+ G DGL   +
Sbjct: 195 QVFPLQSDLFNNLPKEGYDLIVSNPPYVDAEDLANMPEEF-SHEPVLALEAGNDGLILAK 253

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +LN +G+   E+G N  V ++  F +     +       G D V +  +
Sbjct: 254 RIIAAAPEYLNDNGVLVCEVG-NSMVHLIEQFPTVPFEWIKFKH---GGDGVFMLTK 306


>gi|213967483|ref|ZP_03395631.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato T1]
 gi|301386444|ref|ZP_07234862.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato Max13]
 gi|302058664|ref|ZP_07250205.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato K40]
 gi|302131200|ref|ZP_07257190.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213927784|gb|EEB61331.1| modification methylase, HemK family [Pseudomonas syringae pv.
           tomato T1]
 gi|331016925|gb|EGH96981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M302278PT]
          Length = 302

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFKR--GGH 281


>gi|157737442|ref|YP_001490125.1| modification methylase [Arcobacter butzleri RM4018]
 gi|157699296|gb|ABV67456.1| modification methylase [Arcobacter butzleri RM4018]
          Length = 277

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 11/255 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           ++    +  +   +   + ++ +S     +   L   + +   +  +  I+G   FY  +
Sbjct: 23  KEVEILIMYLLDKNVIWLHLNYNSEFS--KIKELETLVKKRATNYPLEYIIGKASFYGEQ 80

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PRPETE+LV++A+       +K++ +++L++GTG+G + + L       K 
Sbjct: 81  FLVKEGVLIPRPETEILVENAVEILK---DKKEPIKVLEIGTGSGIISVMLAMLIENIKI 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           + VDI+ KA+E+AK NA+ + V E+ D   S+ + +V E   ++ +SNPPYI +     L
Sbjct: 138 IAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINLTISNPPYIANDYK--L 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            L V+ F+P  +L GG  G    + I    +    K      E+GY+QK  +   F+   
Sbjct: 196 PLNVK-FEPSNALFGGNLGDELLKDIIKQTND--KKIPYLLCEMGYDQKKSLEEYFKQFN 252

Query: 244 LFLVNAFKDYGGNDR 258
           +   N +KDY   DR
Sbjct: 253 VESYNFYKDYENFDR 267


>gi|289753377|ref|ZP_06512755.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054]
 gi|289693964|gb|EFD61393.1| hypothetical protein hemK [Mycobacterium tuberculosis EAS054]
          Length = 310

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 43  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 100

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 101 VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 155

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 156 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 216 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 273

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 274 LVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|110834335|ref|YP_693194.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alcanivorax borkumensis SK2]
 gi|110647446|emb|CAL16922.1| site-specific DNA-methyltransferase [Alcanivorax borkumensis SK2]
          Length = 306

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCR--VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++ + L       L+S   ++D   +L      +++  + R      +  +     F  +
Sbjct: 45  EALALLMHQLALPLNSDPRVLDA-RLLPLEVSGYVSQLVQRVNHRVPVPYLTHEAWFCGL 103

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR     L++ + A   P ++   V R+LDL TG+G + +A        +
Sbjct: 104 PFYVDERVLIPRSPLAELIEQSFA---PWVDPEQVHRVLDLCTGSGCIAIACAYAFEHAR 160

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
             G DI   AL + K N   +G+ E+   LQSD  ++V+G +D+IVSNPPY+++  +  L
Sbjct: 161 VDGSDICADALAVCKENIERHGLGEQVRALQSDGLAAVDGPYDLIVSNPPYVDAQDMASL 220

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E R  +P ++L  G DGL   R +       L+++G+  VE+G + +  +        
Sbjct: 221 PDEYR-HEPELALASGNDGLDFTRRLLLDAPDQLSEEGVLIVEVGNSWEAMLQEW-PQVP 278

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
            F     +  GG+  V +  R
Sbjct: 279 FFWFEFER--GGHG-VFMLSR 296


>gi|89073464|ref|ZP_01159987.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
 gi|89050728|gb|EAR56209.1| putative adenine-specific methylase [Photobacterium sp. SKA34]
          Length = 310

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D      DS L   +R  +   ++R +     +  +     F  +   +   
Sbjct: 50  LPTLYLPLDVPPEVRDSRLTRSERQSIVERVIRRIDDRTPVSYLTNIAYFCGMEFFVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     L +    +  RI+DL TG+G + +A     P  +   VDIS
Sbjct: 110 VLIPRSPIGELIENRFEPLLSQ----EPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +AL +A+ N   +G+ ++   L+SD    V +  +D IVSNPPY++   +D L  E R 
Sbjct: 166 PEALAVAEQNIADHGLEQQVIPLRSDLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  DG    E+G N  + +   +       +  
Sbjct: 225 HEPELGLAAGFDGLDLVRRILANAPDYLKDDGFLICEVG-NSMIHMEDQYPHIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
               GG+  V L  R
Sbjct: 284 EN--GGHG-VFLLTR 295


>gi|195118905|ref|XP_002003972.1| GI18199 [Drosophila mojavensis]
 gi|193914547|gb|EDW13414.1| GI18199 [Drosophila mojavensis]
          Length = 337

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 14/242 (5%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
            Q       +        +  I+G  DF ++ L  +   F PRPETE  +   +      
Sbjct: 99  EQLADFERFLEARCARMPLQHIIGEWDFMDITLKTAPTVFIPRPETEEFIRLVIE----N 154

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
             K + V +L++G G+GA+ L++L   P      ++ S  A ++A  NA   G+ +RF  
Sbjct: 155 YRKVEHVNMLEVGCGSGAMSLSMLHALPQVDATAIERSKAATKLAWENAKLLGLHQRFKV 214

Query: 153 LQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                 +         +  +D+I+SNPPY+++     L  EV  ++   +LDGG DGL  
Sbjct: 215 FNHTMETDNYLPTELQDKQYDLIISNPPYVKTEEFQFLHPEVVVYENLNALDGGSDGLRV 274

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVLLF 262
            R + +   RHL   G   +E+G +    V  I   +   +L  V +++D    +R +  
Sbjct: 275 ARLVFELACRHLRPGGQLWLELGNDHPPLVKTIMNMQYQGRLNFVQSYEDQYKRERFVQL 334

Query: 263 CR 264
            R
Sbjct: 335 ER 336


>gi|295101444|emb|CBK98989.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Faecalibacterium prausnitzii L2-6]
          Length = 311

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 39/293 (13%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+       TG    ++    D  LD  +   L    VR    E +  + G   F 
Sbjct: 26  DADFDARELFRLATGRD-VRL---SDRPLDAAEAAKLEELTVRRAAREPLQYLCGSWPFL 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +      PR +TE++ ++A       +   +  R LDL  GTG + L + +  P 
Sbjct: 82  DFELAVGPGVLCPRADTEVVAETAAEM----LAGVEAPRALDLCAGTGCLGLGVKRLCPA 137

Query: 122 FKGVGVDISCKALEIAKSNAVTN-----GVSERF---------------------DTLQS 155
            + V V+ S +A    + N         G +E                       + ++ 
Sbjct: 138 AQVVCVEKSPEAYVYLEKNTRLALKGRGGSTENVLDASPFEEPAFDWGVKPARAAEPVEG 197

Query: 156 DWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D F+      EG  D+IVSNPPY+ +  +  L  EV   +P ++L+ G DGL  Y+ IA+
Sbjct: 198 DLFTYWESLPEGQLDLIVSNPPYLTAQEMSELQPEVAK-EPAMALEAGEDGLVFYKAIAE 256

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              + L   G  ++EIG+ Q+  V  + E+     +   KD+GGNDR +   R
Sbjct: 257 HYQKALRPGGALALEIGWQQREAVTALLEANGWADIACRKDFGGNDRCVTARR 309


>gi|330964612|gb|EGH64872.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 302

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELRRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A   E P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ASEPARILDLCTGSGCIGIACADEFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVALADLSYDALEVASLNIERHGMDDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFKR--GGH 281


>gi|295397092|ref|ZP_06807204.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC
           11563]
 gi|294974684|gb|EFG50399.1| protein-(glutamine-N5) methyltransferase [Aerococcus viridans ATCC
           11563]
          Length = 292

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 113/267 (42%), Gaps = 11/267 (4%)

Query: 5   RDSHS---FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
           +D+      L  +   S     +    ++    +     AI +  K +     I+G   F
Sbjct: 22  QDAEIAYHLLLDLADFSVSDWALKRKDIMPIYLKEAYQAAIEKVAKENYPWQYIVGKAWF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +S  T  PR ETE LV             +D  R+LD+GTGTG + + L +  P
Sbjct: 82  YGETFKVSPATLIPRQETEDLVSYVADLIKKEHIAKD-ARVLDIGTGTGIIAVTLKQLFP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             +    DIS  AL IA+ NA         D    D F  V G  FD+I+SNPPYI S  
Sbjct: 141 NLQVTATDISPDALNIARENAAD--KKVVIDFQLGDLFKPVLGQEFDLIISNPPYIGSDE 198

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +      ++P ++L    +G   Y  + D +  +L K G    E GY Q   ++   
Sbjct: 199 TDVMSKSTVLYEPDLALFAEENGYQIYWRLFDQIHDYLAKPGYFIGEFGYQQGQSLLAGA 258

Query: 240 ESRK---LFLVNAFKDYGGNDRVLLFC 263
           + R       VN  +DY GNDR+L+  
Sbjct: 259 KDRLRMTDAEVNIIQDYAGNDRILVIQ 285


>gi|194766081|ref|XP_001965153.1| GF23689 [Drosophila ananassae]
 gi|190617763|gb|EDV33287.1| GF23689 [Drosophila ananassae]
          Length = 320

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V    + +  +  Q       +        +  I+G  DF ++ L  +
Sbjct: 58  IISHVLNKKFNTVPDSFEKLQFNSSQLADFERFLEARCARMPLQHIIGEWDFMDITLKTA 117

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ LA+L   P      ++
Sbjct: 118 PTVFIPRPETEEFVRLVIE----NYKNEKHVNLLEVGCGSGAMSLAMLHSLPQVVSTAIE 173

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA    + +RF                  +  +D+I+SNPPY+++    
Sbjct: 174 RSKAATVLAAENAKLLNLQDRFTVHNHTMEEDKYMPEELKDKKYDLIISNPPYVKTEEFQ 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + +   RHL+  G   +E+G      V  I   
Sbjct: 234 YLHPEVVVYENLNALDGGSDGLRVARLVFELACRHLHPGGKLWLELGNEHPPMVKTIMNL 293

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  + ++ D    +R +
Sbjct: 294 KYEGRLKFIASYNDQYKRERFV 315


>gi|308187642|ref|YP_003931773.1| adenine-specific methylase [Pantoea vagans C9-1]
 gi|308058152|gb|ADO10324.1| putative adenine-specific methylase [Pantoea vagans C9-1]
          Length = 340

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 80  LPSLWLPLDIPEDMRSARLTASERLLIVERVIRRVNERIPVAYLTNKAWFCGHEFFVDER 139

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 140 VLVPRSPIGELIENRFAGLVST----PPRHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 195

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+  +   +++D F  +    +D+IV+NPPY+++  +D L  E R 
Sbjct: 196 TGALAVAEQNIEEHGLIHQVTPIRADLFRELPQLKYDLIVTNPPYVDAEDMDDLPNEYR- 254

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L++ G+   E+G N  V ++  +       +  
Sbjct: 255 HEPELGLAAGSDGLKLVRRILACAPDYLSEQGVLVCEVG-NSMVHMIEQYPDVPFTWLEF 313

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V    R
Sbjct: 314 --D-NGGDGVFTLTR 325


>gi|90579978|ref|ZP_01235786.1| putative adenine-specific methylase [Vibrio angustum S14]
 gi|90438863|gb|EAS64046.1| putative adenine-specific methylase [Vibrio angustum S14]
          Length = 310

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D      DS L   +R  +   ++R +     +  +     F  +   +   
Sbjct: 50  LPTLYLPLDVPPEVRDSRLTRSERQSIVERVIRRIDDRTPVSYLTNIAYFCGMEFFVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     L     ++  RI+DL TG+G + +A     P  +   VDIS
Sbjct: 110 VLIPRSPIGELIENRFEPLL----NQEPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +AL +A+ N   +G+ ++   L+SD    V +  +D IVSNPPY++   +D L  E R 
Sbjct: 166 PEALAVAEQNIADHGLEQQVIPLRSDLLRDVPKDKYDFIVSNPPYVDQEDMDSLPDEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  DG    E+G N  + +   +       +  
Sbjct: 225 HEPELGLAAGFDGLDLVRRILANAPDYLKDDGFLICEVG-NSMIHMEDQYPHIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
               GG+  V L  R
Sbjct: 284 EN--GGHG-VFLLTR 295


>gi|311743961|ref|ZP_07717767.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM
           15272]
 gi|311313091|gb|EFQ83002.1| protein-(glutamine-N5) methyltransferase [Aeromicrobium marinum DSM
           15272]
          Length = 285

 Score =  216 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 6/262 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  VTG+     ++   +  ++ QR      +        +  + G   F +
Sbjct: 26  PRVDAELLLSHVTGVPRA--MLRLSARPNEVQRRDYLALVAARAARVPLQHLTGSAAFRH 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETELL   A+     R  +  V  ++DL TG+GA+ L+++ E P  
Sbjct: 84  VDLEVGPGVFVPRPETELLAGWAVQQLSARGPESPV--VVDLCTGSGAIALSIVHEVPTA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V++   A   A  N    G+  R   + +D F  ++G  DV+V+NPPYI     + 
Sbjct: 142 VVHAVELDEVAFGWAHQNLAGTGIDLRLGDM-ADAFGDLDGTVDVVVANPPYIPLDAWES 200

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  EVRD DP ++L  G DGL   R +     R L   G+   E    Q      +F  R
Sbjct: 201 VAPEVRDHDPALALWSGDDGLDAMRVVEQTAWRLLRPGGVVGAEHADAQGDTAPAVFAGR 260

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               V    D  G  R +   R
Sbjct: 261 -WVDVRDHVDLAGRPRFVTARR 281


>gi|120598374|ref|YP_962948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. W3-18-1]
 gi|120558467|gb|ABM24394.1| modification methylase, HemK family [Shewanella sp. W3-18-1]
 gi|319426848|gb|ADV54922.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella putrefaciens 200]
          Length = 314

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  +   P +  + V RILDL TG+  + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFS---PWLYNKPVTRILDLCTGSACIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFEDAEVDALDISEDALDVAQINIETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    +++L   GL  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGLLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       +N      G D V +  R
Sbjct: 272 IEQFPEVPFTWINFE---NGGDGVFVLTR 297


>gi|302529794|ref|ZP_07282136.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
 gi|302438689|gb|EFL10505.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
          Length = 288

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++ + P  ++D      +   + +  K   +  + GW    N+ +
Sbjct: 28  DADLIAAHVLGVDRGRLPMVP--LVDPPVIDAIGQLVAQRAKRIPLQYLTGWAALGNITV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +  F PRPETELL++  + F    ++ R+   ++DL TG+GA+ LA+  E P     
Sbjct: 86  NVGAGVFVPRPETELLLEWGVKF----LQGREYPVVVDLCTGSGALALAVAHERPDAVVY 141

Query: 126 GVDISCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            VD+  +AL  A+ NA  +  +          D      F+ ++GL D+++ NPPY+   
Sbjct: 142 AVDVDPQALAWARHNADVHSAAGNTPIRLYSGDIADPTMFAELDGLVDLVLCNPPYVPEG 201

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  EV + DP  ++     GL+  R      +R L   G  ++E        V  +
Sbjct: 202 TP--VPPEVGEHDPARAVFAEESGLAVIRHAIAAGARLLRPGGGLAIEHDDTHGSAVPAL 259

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +R+ L  V    DY G  R +   R
Sbjct: 260 VRARRVLTGVEDHPDYTGRARFVTARR 286


>gi|68171900|ref|ZP_00545223.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa]
 gi|88658386|ref|YP_507848.1| HemK family modification methylase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|67998675|gb|EAM85404.1| Modification methylase HemK [Ehrlichia chaffeensis str. Sapulpa]
 gi|88599843|gb|ABD45312.1| modification methylase, HemK family [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 280

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 5/260 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD    +  +    +   I+DP   ++          + +   +  I  I+G R+F+
Sbjct: 22  NPKRDVEIIIKHLINTENLVTILDPHMPINKCDVEVFWKMVKQRSTNIPISHIIGKREFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++SD  +PRP++E ++ S  A       K   + I D GTG+G +   LL     
Sbjct: 82  STDFIVNSDVLDPRPDSETIISSVFAM---YPCKNRRLIIGDFGTGSGCLLSILLLRYRN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+ ++ S KA  +A  N   +G+  R     S W +  +  FD+IVSNPPYI    + 
Sbjct: 139 AVGIAIEKSVKAYRVAYQNFKNHGLYSRIKMRLSSWNTCYD-TFDLIVSNPPYIRRSKIT 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+  +P ++LDGG  GL  Y  I   + R L ++G+  +EIG +Q   + RI   
Sbjct: 198 TLQPEVKLHEPMVALDGGPIGLEIYSQIFVIIKRCLKQNGVAILEIGEDQ-HQIHRIVHR 256

Query: 242 RKLFLVNAFKDYGGNDRVLL 261
             L       D  G  R ++
Sbjct: 257 YGLKFCTYHNDLSGKLRCIV 276


>gi|332298738|ref|YP_004440660.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema brennaborense DSM 12168]
 gi|332181841|gb|AEE17529.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema brennaborense DSM 12168]
          Length = 346

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/298 (22%), Positives = 116/298 (38%), Gaps = 39/298 (13%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    L R+ G+    +   P++VL + Q     +A+        +  I G ++F+ + 
Sbjct: 49  LDCDCILSRLLGVPRSYLFSHPETVLTEPQCAAFFDAVRLRRTGLPVAYITGHKEFWALD 108

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-------------------VRILDLG 105
             ++     P+P+TELLV+ AL      +                        VRI D+ 
Sbjct: 109 FLVTRAVLIPKPDTELLVERALETVARIVGANRPAPPAEGDESGDFAAPPCASVRIADVC 168

Query: 106 TGTGAVCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           TG+G V +++L   P+     ++    DIS  AL +A+ NA        +   D  + D 
Sbjct: 169 TGSGCVAVSILHTLPYRADIRYEMYATDISPAALSVARENAKRLLKAPAAYTLDFFEGDL 228

Query: 158 FSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG----IDGLSHY 206
              +       +  FD+IVSNPPY+ + +   L  + R  +P ++L+G      DG    
Sbjct: 229 LEPLLSDAVSGKESFDLIVSNPPYVPADVTARLLADGRS-EPELALNGDCDGTTDGTGLL 287

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R +       L + G   +E G                  +  + D GG  RV L  +
Sbjct: 288 RRLIGQARWALKRGGFFLIETGEYNAAAAASYLAKNGFTDIVTYTDLGGMPRVTLAKK 345


>gi|300727428|ref|ZP_07060837.1| modification methylase, HemK family [Prevotella bryantii B14]
 gi|299775308|gb|EFI71907.1| modification methylase, HemK family [Prevotella bryantii B14]
          Length = 275

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 8/260 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +   L R+  +S   +++   S L   +   L   I R  K E +  +LG  DFY
Sbjct: 18  EARAITRLVLERLFNMSMTDIVIGKVSELSSEEENELEKNIQRIEKGEPVQYVLGIADFY 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPET  L+D       P++ ++    ILD+GTG+G + +    E   
Sbjct: 78  GRTFHVEPGVLIPRPETAELLDYI-----PKVNQKQT--ILDIGTGSGCIAITASLEHTQ 130

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    DIS KAL+IAK NA     +  F    +      +  +DVI+SNPPYI      
Sbjct: 131 AEVSAWDISPKALQIAKDNAQRLNATVDFHLQDALNAPDHQSCWDVILSNPPYIMDKERQ 190

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V D++P ++L     D L  Y  IA    R L   G+   EI       ++R+ +
Sbjct: 191 NMEKNVLDYEPELALFVPDQDPLKFYTAIARYSVRALKPKGILLFEINPLCADAMLRMLQ 250

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
              L      +D  G  R  
Sbjct: 251 QEGLQQNELIQDQFGKYRFT 270


>gi|70731701|ref|YP_261443.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens Pf-5]
 gi|68346000|gb|AAY93606.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5]
          Length = 302

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +   + + + R ++       +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCALEDDELVHVQHLLKRRIQERVPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +A   E  
Sbjct: 93  CGMSFIVDERVLIPRSPIGELIEKRFEPWL----GSEPARILDLCTGSGCIGIACAYEFR 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +GV ER  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVVLADLSFEALEVANQNIERHGVDERVFTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELGLACGEDGLNLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFER--GGH 281


>gi|239994985|ref|ZP_04715509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii ATCC 27126]
          Length = 324

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 16/234 (6%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   +++ ++    +  I     F  +   +      PR     L+    A 
Sbjct: 86  LTKSEREKIAELVLKRVQTRMPLPYITNEAWFCGMPFYVDERVLIPRSPFAELIQKEFAP 145

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILD+ TG   + +AL    P  +   VDIS  ALE+A  N   +G+S 
Sbjct: 146 FVESTPN----SILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHGLSH 201

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FSS+EG  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL    
Sbjct: 202 RVYPIQSDLFSSLEGQKYDLIVSNPPYVDAEDMADLPEEY-HHEPELALAAGEDGLELVD 260

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ--------KVDVVRI-FESRKLFLVNAFKD 252
            +      +LN  G   VE+G ++         ++V+ + F++    +    KD
Sbjct: 261 IMLKEAPTYLNDGGWLFVEVGNSEVHMSERFPGLEVIWLEFDNGGSGIFAVRKD 314


>gi|317012846|gb|ADU83454.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori Lithuania75]
          Length = 276

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHAHAYLELNHEEEVHFFELVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKLCI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +  + +++VSNPPYI       L 
Sbjct: 139 HASDISPKALEVALKNIERFNLKERVFLKQTHLWDRMP-IIEMLVSNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|113969757|ref|YP_733550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. MR-4]
 gi|113884441|gb|ABI38493.1| modification methylase, HemK family [Shewanella sp. MR-4]
          Length = 314

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  A   P +  + V RILDL TG+G + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFA---PWLYGKPVNRILDLCTGSGCIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFDEAEVDALDISEDALDVAQINVETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +   +  +  E    +P I L  G DGL   + I    +++L   G+  VE+G N  V +
Sbjct: 214 DEEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGILVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       V+      G D V +  R
Sbjct: 272 MEQFPEVPFTWVSFEH---GGDGVFVLTR 297


>gi|223966753|emb|CAR93113.1| CG9531-PA [Drosophila melanogaster]
          Length = 323

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 106/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q       +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSSVPDSFDQLQLNPGQLADFERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY++     
Sbjct: 177 RSKAATVLAAENAKMLGLLHRFEVHNHTMEEDKYLPDVLKDKKYDLIISNPPYVKIEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYQRERFV 318


>gi|31792493|ref|NP_854986.1| hypothetical protein Mb1332 [Mycobacterium bovis AF2122/97]
 gi|148822518|ref|YP_001287272.1| hypothetical protein TBFG_11327 [Mycobacterium tuberculosis F11]
 gi|215403142|ref|ZP_03415323.1| hypothetical protein Mtub0_05481 [Mycobacterium tuberculosis
           02_1987]
 gi|215410939|ref|ZP_03419747.1| hypothetical protein Mtub9_06320 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215426622|ref|ZP_03424541.1| hypothetical protein MtubT9_09609 [Mycobacterium tuberculosis T92]
 gi|215445478|ref|ZP_03432230.1| hypothetical protein MtubT_05888 [Mycobacterium tuberculosis T85]
 gi|218753008|ref|ZP_03531804.1| hypothetical protein MtubG1_05990 [Mycobacterium tuberculosis GM
           1503]
 gi|253799654|ref|YP_003032655.1| hypothetical protein TBMG_02680 [Mycobacterium tuberculosis KZN
           1435]
 gi|254231558|ref|ZP_04924885.1| hypothetical protein hemK [Mycobacterium tuberculosis C]
 gi|254364197|ref|ZP_04980243.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem]
 gi|254550308|ref|ZP_05140755.1| hypothetical protein Mtube_07589 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260186239|ref|ZP_05763713.1| hypothetical protein MtubCP_09453 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260200353|ref|ZP_05767844.1| hypothetical protein MtubT4_09543 [Mycobacterium tuberculosis T46]
 gi|260204558|ref|ZP_05772049.1| hypothetical protein MtubK8_09658 [Mycobacterium tuberculosis K85]
 gi|289442739|ref|ZP_06432483.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46]
 gi|289446895|ref|ZP_06436639.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A]
 gi|289554910|ref|ZP_06444120.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605]
 gi|289573963|ref|ZP_06454190.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289745046|ref|ZP_06504424.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749854|ref|ZP_06509232.1| hypothetical protein hemK [Mycobacterium tuberculosis T92]
 gi|289757400|ref|ZP_06516778.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289761455|ref|ZP_06520833.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503]
 gi|294994857|ref|ZP_06800548.1| hypothetical protein Mtub2_10184 [Mycobacterium tuberculosis 210]
 gi|297633852|ref|ZP_06951632.1| hypothetical protein MtubK4_07004 [Mycobacterium tuberculosis KZN
           4207]
 gi|297730839|ref|ZP_06959957.1| hypothetical protein MtubKR_07094 [Mycobacterium tuberculosis KZN
           R506]
 gi|298524804|ref|ZP_07012213.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A]
 gi|306781617|ref|ZP_07419954.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002]
 gi|306784024|ref|ZP_07422346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003]
 gi|306788387|ref|ZP_07426709.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004]
 gi|306792714|ref|ZP_07431016.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005]
 gi|306797120|ref|ZP_07435422.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006]
 gi|306803000|ref|ZP_07439668.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008]
 gi|306807190|ref|ZP_07443858.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007]
 gi|306967389|ref|ZP_07480050.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009]
 gi|313658171|ref|ZP_07815051.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mycobacterium tuberculosis KZN V2475]
 gi|31618082|emb|CAD94193.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium bovis AF2122/97]
 gi|124600617|gb|EAY59627.1| hypothetical protein hemK [Mycobacterium tuberculosis C]
 gi|134149711|gb|EBA41756.1| hypothetical protein hemK [Mycobacterium tuberculosis str. Haarlem]
 gi|148721045|gb|ABR05670.1| hypothetical protein hemK [Mycobacterium tuberculosis F11]
 gi|253321157|gb|ACT25760.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 1435]
 gi|289415658|gb|EFD12898.1| hypothetical protein TBLG_03482 [Mycobacterium tuberculosis T46]
 gi|289419853|gb|EFD17054.1| hypothetical protein hemK [Mycobacterium tuberculosis CPHL_A]
 gi|289439542|gb|EFD22035.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 605]
 gi|289538394|gb|EFD42972.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289685574|gb|EFD53062.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690441|gb|EFD57870.1| hypothetical protein hemK [Mycobacterium tuberculosis T92]
 gi|289708961|gb|EFD72977.1| hypothetical protein hemK [Mycobacterium tuberculosis GM 1503]
 gi|289712964|gb|EFD76976.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298494598|gb|EFI29892.1| hypothetical protein hemK [Mycobacterium tuberculosis 94_M4241A]
 gi|308325579|gb|EFP14430.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu002]
 gi|308331257|gb|EFP20108.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu003]
 gi|308335073|gb|EFP23924.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu004]
 gi|308338881|gb|EFP27732.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu005]
 gi|308342495|gb|EFP31346.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu006]
 gi|308346429|gb|EFP35280.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu007]
 gi|308350300|gb|EFP39151.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu008]
 gi|308355001|gb|EFP43852.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu009]
 gi|326902922|gb|EGE49855.1| hypothetical protein hemK [Mycobacterium tuberculosis W-148]
 gi|328459400|gb|AEB04823.1| hypothetical protein hemK [Mycobacterium tuberculosis KZN 4207]
          Length = 325

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 43  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 100

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 101 VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 155

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 156 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 216 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 273

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 274 LVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|114046986|ref|YP_737536.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. MR-7]
 gi|113888428|gb|ABI42479.1| modification methylase, HemK family [Shewanella sp. MR-7]
          Length = 314

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  +   P +  + V RILDL TG+G + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFS---PWLYGKPVNRILDLCTGSGCIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFDEAEVDALDISEDALDVAQINVETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +   +  +  E    +P I L  G DGL   + I    +++L   G+  VE+G N  V +
Sbjct: 214 DEEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGILVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       V+      G D V +  R
Sbjct: 272 MEQFPEVPFTWVSFEH---GGDGVFVLTR 297


>gi|109947073|ref|YP_664301.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba]
 gi|109714294|emb|CAJ99302.1| protoporphyrinogen oxidase [Helicobacter acinonychis str. Sheeba]
          Length = 276

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+ R+       + + L    I  +L    FY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAHLELNHREEMRFFELVKKRLNDYPIEYLLESCSFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  + ++G G+G + ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEVGEIGIGSGCISVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + +     ++  +  +     ++VSNPPYI       L 
Sbjct: 139 YASDISQNALEVASKNIERFDLKKCLFLKKTHLWDHMPTT-PMLVSNPPYIAKGYP--LD 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GGI G    + I    +           E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGIKGDEILKEIIFLAAELKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAKFYKDLSGFDRGFVG 269


>gi|86607398|ref|YP_476161.1| HemK family methyltransferase [Synechococcus sp. JA-3-3Ab]
 gi|86555940|gb|ABD00898.1| methyltransferase, HemK family [Synechococcus sp. JA-3-3Ab]
          Length = 285

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 6/261 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNV 63
           ++    L    G  S + ++     L       +     R L     +  +LG  ++  +
Sbjct: 20  QEVELLLRERLGWGSLERLLGRPPTLQGDPLAEVEELWRRRLTERIPLQYLLGRVEWAGL 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L ++     PRPETELLV+ A  +    +         DLGTG+GA+ +AL +  P  +
Sbjct: 80  SLRVTPAVLIPRPETELLVEQASLWLQSNLLPPGSP-FADLGTGSGAIAIALAQGHPQLQ 138

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIV 180
            + VD+S +AL +A +N     + ER   LQ  WF+ ++   G    +VSNPPYI +  +
Sbjct: 139 LLAVDVSPEALAVAAANVADYHLQERVKLLQGSWFAPLDPWRGRLRGLVSNPPYIPTGEL 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EVR  +PR +LDGG DGL H R +      +L  +   +VE+   Q   V    +
Sbjct: 199 AYLMPEVRLHEPRQALDGGEDGLVHLRLLIQKAPDYLAPNSFWAVEVMQGQAPWVAEQLQ 258

Query: 241 SR-KLFLVNAFKDYGGNDRVL 260
           +R     +   +D  G +RV+
Sbjct: 259 ARGGYQQIQVHRDLAGIERVV 279


>gi|194368828|pdb|1SG9|A Chain A, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
 gi|194368829|pdb|1SG9|B Chain B, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
 gi|194368830|pdb|1SG9|C Chain C, Crystal Structure Of Thermotoga Maritima Protein Hemk, An
           N5-Glutamine Methyltransferase
          Length = 276

 Score =  216 bits (551), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ +    + RV G+    + +  D  +   +   +   + +      +H ILG ++F  
Sbjct: 25  SVLEVLLIVSRVLGIRKEDLFL-KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFMG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 84  LSFLVEEGVFVPRPETE----ELVELALELIRKYGIKTVADIGTGSGAIGVSVAK-FSDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   ++I+SNPPY++S  
Sbjct: 139 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSS- 197

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +  +EIG +Q  ++ +I 
Sbjct: 198 -AHLPKDVL-FEPPEALFGGEDGLDFYREFF---GRYDTSGKIVLMEIGEDQVEELKKI- 251

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R LL  R
Sbjct: 252 ----VSDTVFLKDSAGKYRFLLLNR 272


>gi|332993999|gb|AEF04054.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas sp. SN2]
          Length = 311

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 7/201 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   +++ ++    +  I     F  +   +      PR     L+ +    
Sbjct: 73  LTKSEREKIAELVLKRVQTRMPLPYITNEAWFCGMPFYVDERVLIPRSPFAELIQN---- 128

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     K     ILD+ TG G + +AL    P  +   VDIS  ALE+A  N   + +S 
Sbjct: 129 NFEPFVKEAPSHILDMCTGGGCIAIALAHAYPDSQVDAVDISEDALEVADINIQEHQLSH 188

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F+++ G  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL    
Sbjct: 189 RVYPIHSDLFTNLTGQKYDLIVSNPPYVDAEDMADLPDEY-HHEPELALAAGDDGLELVD 247

Query: 208 TIADGVSRHLNKDGLCSVEIG 228
            +     ++L  +G   +E+G
Sbjct: 248 IMLREAPQYLTDNGWLFIEVG 268


>gi|195443344|ref|XP_002069377.1| GK18695 [Drosophila willistoni]
 gi|194165462|gb|EDW80363.1| GK18695 [Drosophila willistoni]
          Length = 315

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDS-VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  D      +  Q       +        +  I+G  DF ++ L  +
Sbjct: 53  IVSHVLKKKFNTVPDDFAQLEFNSSQLSDFERFLEARCARMPLQHIIGEWDFMDITLKTA 112

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ L++L   PF   + ++
Sbjct: 113 PTVFIPRPETEEFVRLVIE----NYKNDKQVNMLEVGCGSGAMSLSILHRLPFVDAIAIE 168

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ ERF                  +  +D+I+SNPPY+++    
Sbjct: 169 RSKAATALAWENAKLLGLQERFKVYNHTMEEDKYMPDELKDKKYDLIISNPPYVKTEEFQ 228

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + +   R+L   G   +E+G      V  I   
Sbjct: 229 FLHPEVVVYENLNALDGGSDGLRVARLVFELACRYLRSGGKLWLELGNEHPPLVKTIMNL 288

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V+++ D    +R +
Sbjct: 289 KYQGRLKFVDSYYDQYKRERFV 310


>gi|317048991|ref|YP_004116639.1| ribosomal protein L3-specific protein-(glutamine-N5)
           methyltransferase [Pantoea sp. At-9b]
 gi|316950608|gb|ADU70083.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. At-9b]
          Length = 310

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+D   A 
Sbjct: 68  LTASERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELIDHRFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +      +   ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+  
Sbjct: 128 LI----ADNPSHILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVAEQNIEEHGLLN 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               +++D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R
Sbjct: 184 HVTPIRADLFRGLPEVKYDLIVTNPPYVDAEDMDDLPGEYR-HEPELGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     ++L++ G+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RILACAPKYLSEQGVLICEVG-NSMVHMIEQYPDVPFTWLEF--D-NGGDGVFMLTR 295


>gi|53805109|ref|YP_113211.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylococcus capsulatus str. Bath]
 gi|53758870|gb|AAU93161.1| modification methylase, HemK family [Methylococcus capsulatus str.
           Bath]
          Length = 321

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFY 61
           AL ++ + +  V             +VL   +R  + + + R +     +  +     F 
Sbjct: 40  ALDEAAALVMHVIRQPHDMPSGYFSAVLTFEERERILHLVERRIEARVPLPYLTHEAWFA 99

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  +      PR     L+++      P +    V  +LDL TG+G + +A  +  P 
Sbjct: 100 GLKFYVDERVLVPRSPIAELIENQFQ---PWLVPDAVGDVLDLCTGSGCIAIACAEAFPQ 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VDIS  ALE+A  N   +G+ E    + SD +  ++G  +D+IVSNPPY+     
Sbjct: 157 ARVDAVDISGGALEVAGMNVRAHGLEETVRLVHSDLYQQLDGSRYDLIVSNPPYVNLQEW 216

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E    +PR+ L+ G DGL   R I  G +  L   G+  VE+G +    +   F 
Sbjct: 217 RALPPEYHA-EPRLGLESGEDGLDCIRRILAGAADRLKPGGVLVVEVGSS-AEALAAAFP 274

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
             +   ++      G + V L  
Sbjct: 275 EVEFLWLDFEH---GGEGVFLLT 294


>gi|315637173|ref|ZP_07892395.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22]
 gi|315478540|gb|EFU69251.1| protoporphyrinogen oxidase [Arcobacter butzleri JV22]
          Length = 277

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 68/255 (26%), Positives = 125/255 (49%), Gaps = 11/255 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           ++    +  +   +   + ++ +S     +   L   + +   +  +  I+G   FY  +
Sbjct: 23  KEVEILIMYLLDKNVIWLHLNYNSEFS--KIKELETLVKKRATNYPLEYIIGKASFYGEQ 80

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PRPETE+LV++A+       +K++ +++L++GTG+G + + L       K 
Sbjct: 81  FLIKEGVLIPRPETEILVENAVEILK---DKKEPIKVLEIGTGSGIISVMLAMLIENIKI 137

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
           + VDI+ KA+E+AK NA+ + V E+ D   S+ + +V E   ++ +SNPPYI +     L
Sbjct: 138 IAVDINPKAIELAKENAIKHNVLEKIDFRLSNLYENVNEDDINLTISNPPYIANDYK--L 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            L V+ F+P  +L GG  G    + I    +    K      E+GY+QK  +   F+   
Sbjct: 196 PLNVK-FEPSNALFGGNLGDELLKDIIKQTND--KKIPYLLCEMGYDQKKSLEEYFKQFN 252

Query: 244 LFLVNAFKDYGGNDR 258
           +   N +KDY   DR
Sbjct: 253 VESYNFYKDYENFDR 267


>gi|146293548|ref|YP_001183972.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella putrefaciens CN-32]
 gi|145565238|gb|ABP76173.1| modification methylase, HemK family [Shewanella putrefaciens CN-32]
          Length = 314

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  +   P +  + V RILDL TG+  + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFS---PWLYNKPVTRILDLCTGSACIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS +     +D+IVSNPPY+
Sbjct: 154 EFEDAEVDALDISEDALDVAQINIETLGVMDRVFPMQSDLFSGIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    +++L   GL  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGLLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       +N      G D V +  R
Sbjct: 272 IEQFPEVPFTWINFE---NGGDGVFVLTR 297


>gi|298292695|ref|YP_003694634.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Starkeya novella DSM 506]
 gi|296929206|gb|ADH90015.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Starkeya novella DSM 506]
          Length = 283

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 138/260 (53%), Gaps = 4/260 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++ + L    GL+   ++   D  + +     L     R    E + R++G R+F++
Sbjct: 23  PEREARALLKGGLGLADIDLVARADLPVAEEDAARLRALAARRADGEPLARLVGRREFWS 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +  +L+ +T  PRPETE LV++ALA    R  K   +RILDLGTGTGA+  ALL E P  
Sbjct: 83  LDFSLAPETLVPRPETETLVEAALALFPDRAAK---LRILDLGTGTGAILAALLSEYPNA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+G+D+S  A   A+ N    G++ R   +   W  ++   FD++ SNPPYI +  +  
Sbjct: 140 VGLGIDLSEGAARQARDNLARLGLAGRSAVIVGRWAEAIHSRFDLVASNPPYIPARDIAA 199

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EVR+ DPR++LDGG DGL  YR +A  +   L   G   +E+G  Q+ DV  +  + 
Sbjct: 200 LDKEVREHDPRLALDGGADGLDAYRVLAAALPGLLVPGGRAVLELGIGQEEDVAALLAAA 259

Query: 243 KLFLVN-AFKDYGGNDRVLL 261
            L     A +D  G  R ++
Sbjct: 260 GLSADGPARRDLSGIARAIV 279


>gi|152965227|ref|YP_001361011.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
 gi|151359744|gb|ABS02747.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
          Length = 285

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 8/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L    G+   ++ V   ++ +D +       +    +   +  + G   F  
Sbjct: 23  ARADAEVLLAHALGVERSRLAV-LVALREDVEPGTFWGLLAEREQRVPLQHLTGRAGFRA 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +   A+  +   +       ++DL TG+GA+ LA+  E P  
Sbjct: 82  LELHVGPGVFVPRPETETVAQLAVDEAQRLVAAGRFPTVVDLCTGSGAIALAVATEVPRA 141

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVI 179
               V++   A   A+ N     ++ R D  + D    F+ ++G  DV+VSNPPY+    
Sbjct: 142 AVHAVELDPMAHAWARRNVDA--IAPRVDLREGDAGTAFADLDGRVDVVVSNPPYVPPGA 199

Query: 180 VDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           V  L  EV   DP ++L G G DGL   R +    +R L   G   VE    Q+     +
Sbjct: 200 VP-LDPEVALHDPEVALYGLGDDGLLVPRRVVAAAARLLVPGGYVVVEHAEVQERSARAL 258

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F       V + +D  G  R     R
Sbjct: 259 FAGPAWTGVESHRDLTGRPRSTSARR 284


>gi|121637229|ref|YP_977452.1| putative hemk protein homolog hemK [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224989704|ref|YP_002644391.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|121492876|emb|CAL71347.1| Probable hemk protein homolog hemK [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|224772817|dbj|BAH25623.1| putative HemK protein homolog [Mycobacterium bovis BCG str. Tokyo
           172]
          Length = 325

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 43  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 100

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 101 VVLHVGPGVFVPRPETEAILGWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 155

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 156 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 216 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 273

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 274 LVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|296170241|ref|ZP_06851834.1| protein-(glutamine-N5) methyltransferase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895117|gb|EFG74835.1| protein-(glutamine-N5) methyltransferase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 282

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 11/264 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      VTG    ++ +  +S  +D       + +    +   +  + G   F  
Sbjct: 23  ARWDAEELAAHVTGTERGRLTL-LESPGEDF-LDRYRDVVAARSRRVPLQHLTGTAAFGP 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETE L+    A  LP         I+DL TG+GA+ +AL  E P  
Sbjct: 81  VSLHVGPGVFVPRPETEALLAWVTAQPLPA-----RPVIVDLCTGSGALAVALAHEYPAA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           + V +D+S  AL  A+ NA    V   + D  +    + ++G  D +V+NPPY+      
Sbjct: 136 RIVAIDVSASALGYARRNAAGTAVELVQADVAEPGLLAELDGGVDAVVANPPYVP--DAA 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            +  EV   DPR ++ GG DG++    + +  +R L   G+ +VE         V +   
Sbjct: 194 VVETEVAQHDPRRAVFGGPDGMAVIAPVVELAARWLRPGGVFAVEHDDTTAARTVEMVTG 253

Query: 242 RK-LFLVNAFKDYGGNDRVLLFCR 264
                 V A  D  G  R +   +
Sbjct: 254 AGCFDDVEARLDLTGRPRFVTARK 277


>gi|330889872|gb|EGH22533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 302

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 113/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|227327270|ref|ZP_03831294.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium carotovorum subsp. carotovorum WPP14]
          Length = 310

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   ++  +   I R  +   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDIPEDMYTSRLITSERQRIVERVIRRVNERIPVAYLTNKAWFCGLEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     LP    +    ILDL TG+G + +A  +  P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNYFDEQLP----KTPSHILDLCTGSGCIAIACAQAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
            +AL + + N   +G+  R   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SEALAVTEQNIQQHGLEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMFDLPQEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 FEPELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG-NSMVHLIDQYPDIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFC 263
             D  G D V +  
Sbjct: 284 --D-NGGDGVFMLT 294


>gi|120554489|ref|YP_958840.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Marinobacter aquaeolei VT8]
 gi|120324338|gb|ABM18653.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Marinobacter aquaeolei VT8]
          Length = 301

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 106/241 (43%), Gaps = 9/241 (3%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +  D+ L   +R  +   + R +     I  +LG   F  +   +      PR     L+
Sbjct: 57  LFLDARLTRSERELILERVERRVNERIPIAYLLGEAWFMGMPFNVDERVLVPRSPIGELL 116

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L    P +    V RILDL TG+G + +         +    D+S  AL +A+SN  
Sbjct: 117 ENGLQ---PWLGATQVQRILDLCTGSGCIGIGAATVFDEAEVDLSDVSADALAVAESNIE 173

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +G+  R   +QSD F ++EG +DVIVSNPPY+++  +  +  E    +P + L  G DG
Sbjct: 174 LHGLEGRVRAIQSDVFDNIEGRYDVIVSNPPYVDAEDLADMPAEY-HHEPELGLAAGDDG 232

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L     I    + +L  DGL  VE+G +    +   +    L  +       G D V L 
Sbjct: 233 LDIAHRIVAQAADYLTDDGLLIVEVGNSWG-AMDDAYPDLPLTWLEFE---NGGDGVFLV 288

Query: 263 C 263
            
Sbjct: 289 T 289


>gi|88807795|ref|ZP_01123306.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805]
 gi|88787834|gb|EAR18990.1| hypothetical protein WH7805_06531 [Synechococcus sp. WH 7805]
          Length = 299

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 74/236 (31%), Positives = 111/236 (47%), Gaps = 6/236 (2%)

Query: 35  RFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
              L +   R +  H  +  ++G   + +V L +S+    PR ETELL+D AL       
Sbjct: 60  LTELESLWHRHVTEHVPLQHLVGRCPWRDVELQVSAAALIPRQETELLIDLALQCLKHSD 119

Query: 94  EK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                      DLGTG+GA+ +AL +  P ++G  VD+S +AL++A+ N  +   S  + 
Sbjct: 120 SDALPQAGFWADLGTGSGAIAVALARSLPRWEGHAVDLSAEALDLARVNLRSLAPSNGWT 179

Query: 152 TLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q  W+  +    G+  +++SNPPYI    +  L   VRD +P ++L GG DGL   R 
Sbjct: 180 LHQGSWWEPLRHLWGMLHLVLSNPPYIPRTQLHGLDPVVRDHEPHLALSGGDDGLDCLRA 239

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I D   R L   G   VE  ++Q  DV+ +     L    A  D  G  R  L  R
Sbjct: 240 IIDKAPRALAPGGWLLVEHHHDQSDDVLMLMRDAGLDAPQARPDLQGVMRFALAQR 295


>gi|86738954|ref|YP_479354.1| HemK family modification methylase [Frankia sp. CcI3]
 gi|86565816|gb|ABD09625.1| modification methylase, HemK family [Frankia sp. CcI3]
          Length = 336

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 6/229 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R +    +  +LGW +F+ +R+ +    F PR  TE LVD A+     R    
Sbjct: 93  ELAAMVRRRVAGLPLEHVLGWAEFHGLRIAVDPGVFVPRRRTEFLVDQAVERVAGRSR-- 150

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             V ++DL  G+GA+ +AL+   P  +    DI   A+  A+ N  + G       L   
Sbjct: 151 -PVTVVDLCCGSGAMGVALVAALPGIEVHAADIEPAAVRCARRNLASAGGQVYDGDLYEP 209

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G  D++ +N PY+ +  ++ +  E R+ +PR++LDGG DGL   R +A    R 
Sbjct: 210 LPAVLRGHVDLLAANAPYVPTDAIELMPPEAREHEPRVALDGGADGLDVLRRVAAEAPRW 269

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           L   G   VE G  Q   +V       L   V +  D      V++  R
Sbjct: 270 LAPGGHLLVETGERQAASIVEASAQAGLIPTVASSADLNAT--VVIATR 316


>gi|117919916|ref|YP_869108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sp. ANA-3]
 gi|117612248|gb|ABK47702.1| modification methylase, HemK family [Shewanella sp. ANA-3]
          Length = 314

 Score =  216 bits (550), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +      P +  + V RILDL TG+G + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFG---PWLYGKPVNRILDLCTGSGCIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFDEAEVDALDISEDALDVAQINVETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +   +  +  E    +P I L  G DGL   + I    +++L   G+  VE+G N  V +
Sbjct: 214 DEEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGILVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       V+      G D V +  R
Sbjct: 272 MEQFPEVPFTWVSFEH---GGDGVFVLTR 297


>gi|78212026|ref|YP_380805.1| HemK family modification methylase [Synechococcus sp. CC9605]
 gi|78196485|gb|ABB34250.1| modification methylase, HemK family [Synechococcus sp. CC9605]
          Length = 301

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 123/267 (46%), Gaps = 12/267 (4%)

Query: 6   DSHSFLCRVTGL---SSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKH-ESIHRILGWRDF 60
           D    L    GL   S  ++++DP   +D  Q    L+    R L     +  ++G   +
Sbjct: 34  DLDWLLDLAGGLRWASLKRLLLDPTRSVDLEQSLEMLSGLWERHLHGNVPLQHLVGLCPW 93

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V L  S     PR ETELLVD AL     + +     R  DLGTG+GA+ +AL +  P
Sbjct: 94  RDVLLESSPAALIPRQETELLVDLAL----SQFKATPPARWADLGTGSGAIAVALARAWP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
              G GVD+S  AL++A+ N                W+S +    G  D++VSNPPYI  
Sbjct: 150 TAPGHGVDLSSDALQLAERNLERCAPHHSCSLHLGSWWSPLKSWWGSLDLVVSNPPYIPG 209

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +VD L   VRD +P ++L GG DGL   R + DG    L+  G   +E  ++Q   V++
Sbjct: 210 AVVDGLEAVVRDHEPHLALLGGADGLDAIRAVVDGAPTGLSPGGWLLLEHHHDQSAQVMQ 269

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +     L    A  D  G  R  L  +
Sbjct: 270 LLRDAGLVEGRAAADLEGTLRFALARK 296


>gi|195577026|ref|XP_002078374.1| GD22575 [Drosophila simulans]
 gi|194190383|gb|EDX03959.1| GD22575 [Drosophila simulans]
          Length = 323

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 108/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q   L   +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSAVPDSYDQLQLNPGQLADLERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+  RF+                 +  +D+I+SNPPY+++    
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVHNHTMEEDKYLPEVLKDKKYDLIISNPPYVKTEEFQ 236

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I   
Sbjct: 237 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNL 296

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  +  + D    +R +
Sbjct: 297 KYEGRLKFIAGYSDQYKRERFV 318


>gi|257484475|ref|ZP_05638516.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289626422|ref|ZP_06459376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289649576|ref|ZP_06480919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 2250]
 gi|298486374|ref|ZP_07004436.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159102|gb|EFI00161.1| Hypothetical adenine-specific methylase yfcB [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|330866346|gb|EGH01055.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|331013259|gb|EGH93315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 302

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  ++  +  GG+   +L
Sbjct: 267 PEVDFAWLDFQR--GGHGVFML 286


>gi|153001286|ref|YP_001366967.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS185]
 gi|160875957|ref|YP_001555273.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS195]
 gi|217972783|ref|YP_002357534.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS223]
 gi|304411862|ref|ZP_07393473.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS183]
 gi|307303370|ref|ZP_07583125.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica BA175]
 gi|151365904|gb|ABS08904.1| modification methylase, HemK family [Shewanella baltica OS185]
 gi|160861479|gb|ABX50013.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS195]
 gi|217497918|gb|ACK46111.1| modification methylase, HemK family [Shewanella baltica OS223]
 gi|304349722|gb|EFM14129.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS183]
 gi|306913730|gb|EFN44152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica BA175]
 gi|315268152|gb|ADT95005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella baltica OS678]
          Length = 314

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  +   P +  + V RILDL TG+  + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFS---PWLYGKPVTRILDLCTGSACIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFEDAEVDALDISEDALDVAQINIETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    +++L   GL  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANAAQYLTPTGLLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       +N      G D V +  R
Sbjct: 272 IEQFPEVPFTWINFE---NGGDGVFVLTR 297


>gi|89256954|ref|YP_514316.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica LVS]
 gi|115315316|ref|YP_764039.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica OSU18]
 gi|118496921|ref|YP_897971.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. novicida U112]
 gi|134301405|ref|YP_001121373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|156503148|ref|YP_001429213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|167010048|ref|ZP_02274979.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. holarctica FSC200]
 gi|194324148|ref|ZP_03057922.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. novicida FTE]
 gi|208780371|ref|ZP_03247712.1| hypothetical adenine-specific methylase YfcB [Francisella novicida
           FTG]
 gi|254368216|ref|ZP_04984236.1| adenine-specific methylase, hemK family [Francisella tularensis
           subsp. holarctica 257]
 gi|254372283|ref|ZP_04987774.1| modification methylase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|254373762|ref|ZP_04989245.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548]
 gi|290954115|ref|ZP_06558736.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica URFT1]
 gi|295312485|ref|ZP_06803254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. holarctica URFT1]
 gi|89144785|emb|CAJ80123.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. holarctica LVS]
 gi|115130215|gb|ABI83402.1| HemK family, adenine-specific methylase [Francisella tularensis
           subsp. holarctica OSU18]
 gi|118422827|gb|ABK89217.1| modification methylase, HemK family [Francisella novicida U112]
 gi|134049182|gb|ABO46253.1| methyltransferase, HemK family [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254026|gb|EBA53120.1| adenine-specific methylase, hemK family [Francisella tularensis
           subsp. holarctica 257]
 gi|151570012|gb|EDN35666.1| modification methylase [Francisella novicida GA99-3549]
 gi|151571483|gb|EDN37137.1| hypothetical protein FTDG_01546 [Francisella novicida GA99-3548]
 gi|156253751|gb|ABU62257.1| methyltransferase, HemK family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|194321595|gb|EDX19079.1| hypothetical adenine-specific methylase YfcB [Francisella
           tularensis subsp. novicida FTE]
 gi|208743739|gb|EDZ90042.1| hypothetical adenine-specific methylase YfcB [Francisella novicida
           FTG]
 gi|328676394|gb|AEB27264.1| Adenine-specific methylase, HemK family [Francisella cf. novicida
           Fx1]
          Length = 314

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 68  RLLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 128 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEDANITLVDISDDALAVANHNIKKHQLS 185

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   
Sbjct: 186 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEY-HYEPKLALEAGDDGLDLA 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        + +F D  G D V L  
Sbjct: 245 KRIILEADKYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWL-SFAD--GGDGVFLLT 297


>gi|268680052|ref|YP_003304483.1| modification methylase, HemK family [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268618083|gb|ACZ12448.1| modification methylase, HemK family [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 273

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 11/256 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             +++   L  +       ++   D  +   +  +  +A+ R  ++E +  ILG   FY+
Sbjct: 21  PQKEAMLLLGEMLQKEMSWLVAHSDDEMMPNE--WWHSALKRRARYEPLEYILGRASFYD 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               + +    PRPETE+LVD A+  +    ++     I+++G G+G + + L    P  
Sbjct: 79  REFEVDARVLIPRPETEILVDKAVELAKTLPKE---AHIVEIGCGSGIISIMLALMLPDV 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   VDIS +AL +++ NAV +GVS+R   +Q  +   V    D+IVSNPPYI +     
Sbjct: 136 KITAVDISNEALHVSQKNAVKHGVSKRIAFVQGSYLDGVSEPIDMIVSNPPYIANHEALE 195

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              E   ++P ++L GG+ G      I D       K  + + E+GY+Q+  ++   + +
Sbjct: 196 ---ENLSYEPSLALFGGVRGDEMLCHIMDLFCE--RKVKVLACEMGYDQRYAIMDYAKQK 250

Query: 243 KLFLVNAFKDYGGNDR 258
            L  V+ ++D  G DR
Sbjct: 251 DLV-VDFYQDLAGLDR 265


>gi|84387710|ref|ZP_00990726.1| putative adenine-specific methylase [Vibrio splendidus 12B01]
 gi|84377393|gb|EAP94260.1| putative adenine-specific methylase [Vibrio splendidus 12B01]
          Length = 310

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 11/241 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   +R  +   +++ +        +     F  +   +      PR     L+++
Sbjct: 64  MNSRLTSSERLRIVERVIKRINDRTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIEA 123

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +
Sbjct: 124 QFQPWLI----EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDH 179

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           G+ ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL
Sbjct: 180 GMEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEF-THEPELGLAAGTDGL 238

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              R I      +L  DG+   E+G N  V ++  +       +      GG+  V +  
Sbjct: 239 KLVRRILANAPNYLTDDGILICEVG-NSMVHMMDQYPEIPFTWIEFSN--GGHG-VFMIT 294

Query: 264 R 264
           R
Sbjct: 295 R 295


>gi|149188130|ref|ZP_01866425.1| N5-glutamine methyltransferase [Vibrio shilonii AK1]
 gi|148838118|gb|EDL55060.1| N5-glutamine methyltransferase [Vibrio shilonii AK1]
          Length = 310

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R         +     F  +   +      PR     L+++   
Sbjct: 67  RLTSSERLRVVERVIKRINDRTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIEAQFQ 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      + VRI+DL TG+G + +A     P  +   +DIS  ALE+A+ N   +G+ 
Sbjct: 127 PWLS----EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALEVAEQNVQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPEEF-THEPELGLAAGTDGLKLV 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L  +G+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 242 RRILSNAPDYLTDNGILICEVG-NSMVHMMEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|288941148|ref|YP_003443388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Allochromatium vinosum DSM 180]
 gi|288896520|gb|ADC62356.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Allochromatium vinosum DSM 180]
          Length = 310

 Score =  215 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A+ ++   +     L  +      D  L   +R  +   I R + +      ++G   F
Sbjct: 38  NAIDEAALLVLSALHLDPNLPANFRDCRLTPAERVRVCELIDRRVVERVPAAYLIGRAWF 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     LV+       P I+   V R+LDL TG+G + +A     P
Sbjct: 98  AGLEFRVDEQVLVPRSPIAELVEVGFD---PWIDADRVGRVLDLCTGSGCIGIAAAVYLP 154

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VDIS +AL IA+ N   +GV +R    +SD F+++ +  +DVIVSNPPY+    
Sbjct: 155 DADVDLVDISPEALVIARDNVERHGVGDRVHIFESDLFAALGDQRYDVIVSNPPYVSRAE 214

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            + L  E  + +P + L  G DGL     I D  + HLN+ G+  VE+G N    +    
Sbjct: 215 FEALPTEYHN-EPHLGLLAGEDGLDIVLRILDEAADHLNERGILVVEVG-NSLPFLESRL 272

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +   +   G + V L  R
Sbjct: 273 PGVPFTWIEFER---GGEGVFLLTR 294


>gi|56708636|ref|YP_170532.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110671108|ref|YP_667665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis FSC198]
 gi|224457830|ref|ZP_03666303.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis MA00-2987]
 gi|254371269|ref|ZP_04987271.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875502|ref|ZP_05248212.1| hemK, adenine-specific methylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56605128|emb|CAG46250.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321441|emb|CAL09633.1| Adenine-specific methylase, HemK family [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151569509|gb|EDN35163.1| hypothetical protein FTBG_01043 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841501|gb|EET19937.1| hemK, adenine-specific methylase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159874|gb|ADA79265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. tularensis NE061598]
          Length = 314

 Score =  215 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 68  RLLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 128 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEDANITLVDISDDALAVANHNIKKHQLS 185

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   
Sbjct: 186 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEY-HYEPKLALEAGDDGLDLA 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        + +F D  G D VLL  
Sbjct: 245 KRIILEADKYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWL-SFAD--GGDGVLLLT 297


>gi|300789605|ref|YP_003769896.1| HemK protein [Amycolatopsis mediterranei U32]
 gi|299799119|gb|ADJ49494.1| HemK protein [Amycolatopsis mediterranei U32]
          Length = 288

 Score =  215 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++ + P  ++D      +   + +  K   +  + GW    ++ +
Sbjct: 28  DAEVIAAHVLGVERGRLPMVP--LVDPPVIEAIGQLVQQRAKRIPLQYLTGWAALGDITV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + +  F PRPETELL++  + F    ++ R+   ++DL TG+GA+ LA+    P     
Sbjct: 86  AVGAGVFVPRPETELLLEWGVKF----LQGREFPVVVDLCTGSGALALAVAHARPDAVVY 141

Query: 126 GVDISCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            VDI  +AL  A+ NA  +  +          D      F+ ++GL D+++ NPPY+   
Sbjct: 142 AVDIDPQALAWARHNADVHADAGNTPIRLYSGDIGDPTMFAELDGLVDLVLCNPPYVPEG 201

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  EV + DP  ++     GL+  R      +R L   G  ++E        V  +
Sbjct: 202 TP--VPPEVAEHDPPRAVFAEESGLAVIRHAIAAGARLLRPGGGLAIEHDDTHGSAVPAL 259

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +R+ L  V    D  G  R +   R
Sbjct: 260 VRARRVLTGVEGHTDLTGRARFVTARR 286


>gi|307131869|ref|YP_003883885.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya
           dadantii 3937]
 gi|306529398|gb|ADM99328.1| ribosomal protein L3 N5-glutamine methyltransferase [Dickeya
           dadantii 3937]
          Length = 310

 Score =  215 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++  A 
Sbjct: 68  LTSSERHRIVERVIRRVNERVPVAYLTNKAWFCGLEFYVDERVLVPRSPIGELINNRFAS 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP   +     ILDL TG+G + +A  +  P  +   VDIS +AL + + N   +G+  
Sbjct: 128 LLPNAPR----HILDLCTGSGCIAIACAQAFPEAEVDAVDISAEALAVTEQNIQQHGMEY 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F  +    +D+IV+NPPY++   +  L  E R F+P + L  G DGL   R
Sbjct: 184 NVTPIRSDLFRDLPAIQYDLIVTNPPYVDEEDMADLPQEYR-FEPELGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L ++G+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RILACAPDFLTEEGVLICEVG-NSMVHLMEQYPDVPFTWLEF--D-NGGDGVFMLTR 295


>gi|291618242|ref|YP_003520984.1| YfcB [Pantoea ananatis LMG 20103]
 gi|291153272|gb|ADD77856.1| YfcB [Pantoea ananatis LMG 20103]
          Length = 340

 Score =  215 bits (549), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D      ++ L   +R  +   ++R +     +  +     F      +   
Sbjct: 80  LPTLWLPLDIPEDMRNARLTASERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 139

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 140 VLVPRSPIGELIENRFAGLI----TDKPRHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 195

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      +++D F  +    +D+IV+NPPY+++  +D L  E   
Sbjct: 196 HDALAVAEQNIEEHGLIHHVTPIRADLFRELPPVQYDLIVTNPPYVDAEDMDDLPSEY-Q 254

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L++ G+   E+G N  V ++  +       +  
Sbjct: 255 HEPELGLAAGSDGLKLVRRILACAPGYLSEQGVLICEVG-NSMVHMMEQYPDVPFTWLEF 313

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  R
Sbjct: 314 --D-NGGDGVFMLTR 325


>gi|291283571|ref|YP_003500389.1| putative adenine-specific methylase [Escherichia coli O55:H7 str.
           CB9615]
 gi|13362684|dbj|BAB36637.1| putative adenine-specific methylase [Escherichia coli O157:H7 str.
           Sakai]
 gi|209764668|gb|ACI80646.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764670|gb|ACI80647.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764672|gb|ACI80648.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764674|gb|ACI80649.1| putative adenine-specific methylase [Escherichia coli]
 gi|209764676|gb|ACI80650.1| putative adenine-specific methylase [Escherichia coli]
 gi|290763445|gb|ADD57406.1| Putative adenine-specific methylase [Escherichia coli O55:H7 str.
           CB9615]
          Length = 421

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|325273576|ref|ZP_08139802.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
 gi|324101293|gb|EGB98913.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas sp. TJI-51]
          Length = 302

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D +L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGAVHLPWEVADSYLDCMLEDDERVRLQHLLKRRIEERVPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +      P
Sbjct: 93  CGMSFIVDERVLVPRSPIGELIEKRFEPWL----ANEPARILDLCTGSGCIGIVAADVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+  R  T+Q D F+ + G  FD+I+SNPPY+++  
Sbjct: 149 EAEVVLADLSFQALEVANQNIERHGLDARVYTVQGDGFAGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  E    +P + L  G DGL   R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FDDMPAEY-HHEPELGLACGNDGLDLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  +   +  GG+   +L
Sbjct: 267 PEVDFAWLEFER--GGHGVFML 286


>gi|161612878|ref|YP_001586844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi B
           str. SPB7]
 gi|161362242|gb|ABX66010.1| hypothetical protein SPAB_00584 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 310

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  + +     +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPNVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|327402057|ref|YP_004342895.1| protein-(glutamine-N5) methyltransferase [Fluviicola taffensis DSM
           16823]
 gi|327317565|gb|AEA42057.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Fluviicola taffensis DSM 16823]
          Length = 284

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 15/266 (5%)

Query: 3   ALRDSHSFL----CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           + R++ + L      V   +   ++V  +  + +     L+    R    E    I+G+ 
Sbjct: 20  SEREARNILMLTLEDVFNFNRSTLLVSSEINISETDLKELSQISSRLKTGEPYQYIVGFT 79

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F ++++ ++     PRPETE L             +     I D  TG+G +  AL   
Sbjct: 80  YFDDLKINVAPGVLIPRPETEELTAWI-----QDTMQLKNPIIEDWCTGSGCIAFALKNR 134

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYI 175
            P     G DIS +ALEIA+ N   NG++      + D  S +       D+IVSNPPYI
Sbjct: 135 IPNAIVSGFDISEEALEIARKN--GNGLNLNVQFEKRDALSILVSGNEKVDLIVSNPPYI 192

Query: 176 ESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +    +   V  F+P ++L     D L  YR +AD  S  LN DG    E+  N    
Sbjct: 193 PWIEKMEMHQNVTAFEPDLALFVPNEDPLLFYRKLADYASASLNTDGYLFFELHENFATQ 252

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVL 260
              + E      V   +D  G  R+L
Sbjct: 253 TKEMVEKLGFHPVEIREDLQGKSRML 278


>gi|256822180|ref|YP_003146143.1| HemK family modification methylase [Kangiella koreensis DSM 16069]
 gi|256795719|gb|ACV26375.1| modification methylase, HemK family [Kangiella koreensis DSM 16069]
          Length = 304

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L D ++  +     R    + +  I     F  +   +      PR     L+++   
Sbjct: 68  KLLADEKKHLIHAIFERVENRKPLAYITNKAYFVGLEFYIDERVLVPRSPIAELIENDFY 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      D  RILDL  G+G + LA+       + V  DIS  A+ +A  N    G+ 
Sbjct: 128 PWLEA----DNPRILDLCCGSGCIGLAIAAYIDDAEVVLSDISDDAITVADINNERLGLY 183

Query: 148 ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  T+ SD F S+ +  FD+IVSNPPY++S  +  +  E    +P I L  G DGL   
Sbjct: 184 PKAQTVVSDLFESLSDEKFDLIVSNPPYVDSEDLSDMPAEY-QHEPEIGLGSGEDGLDIT 242

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I +  + HL + G   VE+G +    +   F +     +   K   G D V L  R
Sbjct: 243 RRILEQAAEHLTEQGCLIVEVGNSW-PALEEAFPNVPFSWIEFEK---GGDGVFLLTR 296


>gi|86146091|ref|ZP_01064417.1| putative adenine-specific methylase [Vibrio sp. MED222]
 gi|218708869|ref|YP_002416490.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio splendidus LGP32]
 gi|85836038|gb|EAQ54170.1| putative adenine-specific methylase [Vibrio sp. MED222]
 gi|218321888|emb|CAV17875.1| Hypothetical adenine-specific methylase [Vibrio splendidus LGP32]
          Length = 310

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 55/241 (22%), Positives = 104/241 (43%), Gaps = 11/241 (4%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   +R  +   +++ +        +     F  +   +      PR     L+++
Sbjct: 64  MNSRLTSSERLRIVERVIKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIEA 123

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                L      +  RI+D+ TG+G + +A     P  +   +DIS  AL++A+ N   +
Sbjct: 124 QFQPWLI----EEPTRIMDMCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDH 179

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           G+ ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL
Sbjct: 180 GMEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGL 238

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              R I      +L  DG+   E+G N  V ++  +       +      GG+  V +  
Sbjct: 239 KLVRRILANAPDYLTDDGILICEVG-NSMVHMMDQYPEIPFTWIEFSN--GGHG-VFMIT 294

Query: 264 R 264
           R
Sbjct: 295 R 295


>gi|329729336|gb|EGG65744.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21193]
          Length = 277

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 24  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 84  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +   +   + ++SNPPYI+   +  +
Sbjct: 138 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEDIKLNGLISNPPYIDEKDMVTM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 196 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 255

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 256 PDKKIDIIKDINGHDRIVSF 275


>gi|281338315|gb|EFB13899.1| hypothetical protein PANDA_009308 [Ailuropoda melanoleuca]
          Length = 338

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 78/279 (27%), Positives = 121/279 (43%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  RQ   +     R L+   +  ILG  
Sbjct: 59  EAQASSEYIVAHVLG-AKTFQSLRPVLWTQPLTPRQLQCVQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L   A S   +  +    IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLKMVPPVFIPRPETEELVEWVLEEVAQSPCAMGAQGGPLILEVGCGSGAIALSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSV-EGLFDVI 168
           L + P  + + VD    A+ + + NA    + +R         L+  W   +  G  D++
Sbjct: 178 LSQLPQSRVIAVDKGEAAICLTQENAQRLQLLDRIQIVPLDVTLEGSWAHLLTWGPMDLV 237

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+R ++  ++LDGG +G+     I       L   G   +E+ 
Sbjct: 238 VSNPPYIFHRDMEQLAPEIRSYEDPLALDGGEEGMDIITYILALAPWLLKDSGSIFLEVD 297

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 PRHPELVGSWLQSRPDLSLDLVAVRRDFCGRSRFLHIRR 336


>gi|21283770|ref|NP_646858.1| hypothetical protein MW2041 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486910|ref|YP_044131.1| hypothetical protein SAS2020 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297210062|ref|ZP_06926455.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300910425|ref|ZP_07127877.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|21205212|dbj|BAB95906.1| MW2041 [Staphylococcus aureus subsp. aureus MW2]
 gi|49245353|emb|CAG43828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296885262|gb|EFH24202.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300888267|gb|EFK83458.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 278

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +   +   + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEDIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|330897669|gb|EGH29088.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. japonica str. M301072PT]
 gi|330940028|gb|EGH43220.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 302

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R + +      +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISDLQRLIKRRIDERVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGLSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  ++  +  GG+   +L
Sbjct: 267 PEVDFAWLDFQR--GGHGVFML 286


>gi|149728859|ref|XP_001493498.1| PREDICTED: similar to HemK methyltransferase family member 1
           (M.HsaHemKP) [Equus caballus]
          Length = 357

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L   Q   +       L+   +  ILG  
Sbjct: 58  EARESSEYIVAHVLG-AKTFQSLRPALWTQPLTPWQLQCIEELSSCRLQRMPVQYILGEW 116

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L     R   +  +    IL++G G+GA+ L+L
Sbjct: 117 DFQGLSLKMAPPVFIPRPETEELVEWVLEEVTQRSHVVGAQGGPLILEVGCGSGAISLSL 176

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSV-EGLFDVI 168
           L + P  + + VD    A+ +   NA    + +R         L+  W   V  G  D++
Sbjct: 177 LSQLPQSRVIAVDKGEAAICLTHENAQRLQLQDRIRIMLLDVTLEGSWAHFVPWGPMDLV 236

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPY+    ++ L  E+R ++   +LDGG +G+     I    S  L   G   +E+ 
Sbjct: 237 VSNPPYVFHQDMEQLAPEIRSYEDPAALDGGEEGMDVITHILALASWLLKDSGSIFLEVD 296

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 +    +SR    L LV   +D+ G  R L   R
Sbjct: 297 PRHPELIGSWLQSRPDLSLDLVAVRRDFCGRPRFLHIQR 335


>gi|15618038|ref|NP_224322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae CWL029]
 gi|15835650|ref|NP_300174.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae J138]
 gi|16752930|ref|NP_445201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila pneumoniae AR39]
 gi|4376377|gb|AAD18267.1| A/G specific methylase [Chlamydophila pneumoniae CWL029]
 gi|8163474|gb|AAF73693.1| modification methylase, HemK family [Chlamydophila pneumoniae AR39]
 gi|8978488|dbj|BAA98325.1| A/G specific methylase [Chlamydophila pneumoniae J138]
 gi|269302995|gb|ACZ33095.1| methyltransferase, HemK family [Chlamydophila pneumoniae LPCoLN]
          Length = 288

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 7/257 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  +  +SS   + D    + +         +    +      + G   F  +RL
Sbjct: 25  EALYILMDLLEVSSRAKLFDL-VGISETMLMEYRKRLALRGQRCPTAYLNGAVSFLGLRL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + S    PR ETELL +  + + L   E   +    D+  G+G + LA+ K  P  + V
Sbjct: 84  RVDSRVLIPRTETELLAEYIINYLLSHSE---IQTFYDICCGSGCLGLAIKKSCPHVEVV 140

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +A+ +A  NA +NG+      L  D  +      D  V NPPY+    +  +  
Sbjct: 141 LSDVCPQAVAVANENAKSNGLD--VKILLGDLSAPYTRPADAFVCNPPYLSFNEIIHIDP 198

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           EVR ++P  +L GG  GL  Y+ IA  + + +   G+  +EIG +Q   +  IF    ++
Sbjct: 199 EVRCYEPWKALVGGSTGLEFYQRIAQELPKIVTSTGVGWLEIGSSQGESIKNIFSKHGIY 258

Query: 246 LVNAFKDYGGNDRVLLF 262
                +D  G DR+   
Sbjct: 259 G-RLHQDLSGRDRIFFL 274


>gi|189501489|ref|YP_001957206.1| HemK family modification methylase [Candidatus Amoebophilus
           asiaticus 5a2]
 gi|189496930|gb|ACE05477.1| modification methylase, HemK family [Candidatus Amoebophilus
           asiaticus 5a2]
          Length = 285

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 10/229 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R  +HE I  ILG   F N    ++     PRPETE LV   +  +      + 
Sbjct: 60  LAEIVQRIHQHEPIQYILGEAPFMNRNFFVNPSVLIPRPETEELVQLIIKEN-----SKP 114

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            + ILD+GTG+G + + L K+    +  G+DIS  AL++A+SNA    +    + +Q++ 
Sbjct: 115 GLHILDIGTGSGCIAITLAKDLSDAQVDGLDISEPALKVARSNAQR--LQANVNWIQANI 172

Query: 158 F-SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVS 214
               + G  +D+IVSNPPY+     + +   V  ++P  ++       L  Y  I    S
Sbjct: 173 LQDPLPGRKWDIIVSNPPYVCLSEKEQMQQRVLAYEPAQAIFVSDEAPLIFYEQIIQLAS 232

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            +L   G   +EI     + +      ++   +   +D  G DR +   
Sbjct: 233 TYLQPTGKLYLEINERFGLALASKLADKQFNNIYIEQDLQGKDRWVKAT 281


>gi|240949667|ref|ZP_04754002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor NM305]
 gi|240295925|gb|EER46601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus minor NM305]
          Length = 315

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L +        S L D ++  + + I   L   + +  +     F
Sbjct: 48  NAWDEAQQLVLNALYLPADVPEAMYQSRLTDVEKTRVFHFIQERLGSRKPVAYLTNSSWF 107

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+       +    K    RILD+ TG+G + +A     P
Sbjct: 108 CGLEFYVDERVIVPRSPIGELISQQFNGLISTSPK----RILDMCTGSGCIAIACAVAFP 163

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VD+S  AL++A+ N   + +S R   + SD F+ +    +D+IV+NPPY++   
Sbjct: 164 DAEVDAVDLSLDALDVAQINIERHQLSHRVFPISSDLFNDIPQDKYDLIVTNPPYVDQED 223

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D +  E   F+P ++L  G DGL+  + I    + +L+ +G+   E+G N  + ++  +
Sbjct: 224 LDDMPEEF-HFEPELALGSGEDGLNITKRILAQAADYLSDNGVLVCEVG-NSMIHLMEQY 281

Query: 240 ESRKLFLVNA 249
            S     +  
Sbjct: 282 PSVPFNWIEF 291


>gi|148976458|ref|ZP_01813164.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3]
 gi|145964281|gb|EDK29537.1| N5-glutamine methyltransferase [Vibrionales bacterium SWAT-3]
          Length = 310

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +++ +        +     F  +   +      PR     L+++ 
Sbjct: 65  NSRLTSSERLRIVERVIKRINDRTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIEAQ 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWL----TEEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  DG+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDDGILICEVG-NSMVHMMDQYPEIPFTWIEFSN--GGHG-VFMITR 295


>gi|15802877|ref|NP_288904.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 EDL933]
 gi|12516692|gb|AAG57459.1|AE005464_10 putative adenine-specific methylase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 421

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|15608440|ref|NP_215816.1| hypothetical protein Rv1300 [Mycobacterium tuberculosis H37Rv]
 gi|148661088|ref|YP_001282611.1| hypothetical protein MRA_1308 [Mycobacterium tuberculosis H37Ra]
 gi|167969627|ref|ZP_02551904.1| HemK [Mycobacterium tuberculosis H37Ra]
 gi|306775472|ref|ZP_07413809.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001]
 gi|306971581|ref|ZP_07484242.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010]
 gi|1322424|emb|CAA97733.1| PROBABLE HEMK PROTEIN HOMOLOG HEMK [Mycobacterium tuberculosis
           H37Rv]
 gi|148505240|gb|ABQ73049.1| HemK [Mycobacterium tuberculosis H37Ra]
 gi|308216020|gb|EFO75419.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu001]
 gi|308358949|gb|EFP47800.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu010]
          Length = 325

 Score =  215 bits (548), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 43  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 100

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 101 VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 155

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 156 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQVDLMVSNPPYIPD 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 216 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 273

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 274 LVSSTKLFVDVQARKDLAGRPRFVTAMR 301


>gi|332140707|ref|YP_004426445.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550729|gb|AEA97447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 324

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 16/237 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +++ ++    +  I     F  +   +      PR     L+ + 
Sbjct: 83  NSRLTKSEREKIAELVLKRVQTRMPLPYITNEAWFCGMPFYVDERVLIPRSPFAELIQNE 142

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  +    +     ILD+ TG   + +AL    P  +   VDIS  ALE+A  N   +G
Sbjct: 143 FAPFV----ESTPANILDMCTGGACIAIALAHAYPEAQVDAVDISTDALEVADINIQEHG 198

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +S R   +QSD FSS+ G  +D+IV+NPPY+++  +  L  E    +P ++L  G DGL 
Sbjct: 199 LSHRVYPIQSDLFSSLAGQKYDLIVTNPPYVDAEDMADLPEEY-HHEPELALAAGDDGLD 257

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ--------KVDVVRI-FESRKLFLVNAFKD 252
               +      +LN  G   VE+G ++         ++V+ + FE+    +    KD
Sbjct: 258 LVDIMLKEAPTYLNDGGWLFVEVGNSEVHMSERFSGLEVIWLEFENGGSGIFAVRKD 314


>gi|50121993|ref|YP_051160.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pectobacterium atrosepticum SCRI1043]
 gi|49612519|emb|CAG75969.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 310

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   ++  +   I R  +   +  +     F  +   +   
Sbjct: 50  LPSLYLPLDIPEDMYTSRLITSERQRIVERVIRRVNERIPVAYLTNKAWFCGLEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     LP++       ILDL TG+G + +A  +  P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNYFDEQLPKVPN----LILDLCTGSGCIAIACAQAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   + +  R   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SDALAVTEQNIQQHELEYRVTPIRSDLFRDLPAIRYDLIVTNPPYVDEEDMSDLPQEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 FEPELGLAAGNDGLDLVRRILACAPDYLSDDGVLICEVG-NSMVHLIDQYPEVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFC 263
             D  G D V +  
Sbjct: 284 --D-NGGDGVFMLT 294


>gi|62260141|gb|AAX77884.1| unknown protein [synthetic construct]
          Length = 349

 Score =  214 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 94  RLLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 153

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 154 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEDANITLVDISDDALAVANHNIKKHQLS 211

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   
Sbjct: 212 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEY-HYEPKLALEAGDDGLDLA 270

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        + +F D  G D VLL  
Sbjct: 271 KRIILEADKYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWL-SFAD--GGDGVLLLT 323


>gi|308235423|ref|ZP_07666160.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis ATCC 14018]
          Length = 306

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 19/275 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  D+   L    G+S   +    I+              ++ I R    E +  I+G  
Sbjct: 27  AEYDARLLLAHACGVSLADLNKALILGDFKDFLPNYASKYSDFISRRASREPLQHIIGCA 86

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +    F PRPETE++V   L +      K  +  +LDL  G+GA+ L++  E
Sbjct: 87  TFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPI--VLDLCAGSGAIGLSVASE 144

Query: 119 SPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW-------FSSVEGLFDV 167
               +   V+ S KA E  + N    A    +  R+  +  D         ++++   DV
Sbjct: 145 VADAQVWAVEKSPKAFEYLQKNYNKIAEKYNILNRYHAILGDATNVNLPEKAAIKEKVDV 204

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++NPPY+         +E RD+DP+++L GG  DGL   + I      +L + G+  +E
Sbjct: 205 VITNPPYVPESQPVE-QIEARDYDPKMALYGGSQDGLLIPQKIVKASFAYLRRGGIMIME 263

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               Q   +    ++          D     R ++
Sbjct: 264 HDITQGEALADYAKNVGFSSAKVKNDLTNRARFVV 298


>gi|254779627|ref|YP_003057733.1| Modification methylase HemK [Helicobacter pylori B38]
 gi|254001539|emb|CAX29557.1| Modification methylase HemK [Helicobacter pylori B38]
          Length = 274

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEARFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS +ALE+A  N     + ER    Q+  +  +    +++VSNPPYI       L 
Sbjct: 139 YASDISPRALEVALKNIERFNLKERVFLKQTRLWDRMP-TIEMLVSNPPYIAKGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +           E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAGLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|32491093|ref|NP_871347.1| hypothetical protein WGLp344 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166300|dbj|BAC24490.1| hemK [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 281

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 136/259 (52%), Gaps = 8/259 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++++S   L  V  + S ++I+  ++ L   Q + L N ++R    E I  ++   +F++
Sbjct: 25  SIKESELLLKHVLRVDSKKIILHGENYLTKNQYYKLKNLLIRRKLGEPISYLIKSHEFWS 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++ +S   F PR +TE L+++AL+     +  +   RIL+LG+G+G + L+L KE+P +
Sbjct: 85  IKIKISCGIFIPRHDTECLIETALS-----LPLKKESRILELGSGSGVISLSLGKENPKW 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVD 181
              G+D + K++ +++ NA    +       + +W +   + ++ +I++NPPYI+     
Sbjct: 140 IITGIDKNKKSIFLSRKNAKMLNI-NNVKFKKINWKYLKDKKIYSMIITNPPYIKKNDPC 198

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  +++ F+P+ +L  G DGL   + I     + L + G   VE G+ Q  DV  +F S
Sbjct: 199 LLKGDLK-FEPKSALISGRDGLKDIKIICKISKKFLKRKGYLLVEHGFQQGEDVRNLFLS 257

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    DY   +RV 
Sbjct: 258 NGYKSVCTCFDYTRKERVT 276


>gi|205353498|ref|YP_002227299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 287/91]
 gi|205273279|emb|CAR38244.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326628591|gb|EGE34934.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 310

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|82544812|ref|YP_408758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii Sb227]
 gi|81246223|gb|ABB66931.1| putative adenine-specific methylase [Shigella boydii Sb227]
          Length = 421

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|66045094|ref|YP_234935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae B728a]
 gi|63255801|gb|AAY36897.1| Modification methylase HemK [Pseudomonas syringae pv. syringae
           B728a]
 gi|330973273|gb|EGH73339.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 302

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R + +      +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|15612065|ref|NP_223717.1| protoporphyrinogen oxidase [Helicobacter pylori J99]
 gi|4155582|gb|AAD06575.1| PROTOPORPHYRINOGEN OXIDASE [Helicobacter pylori J99]
          Length = 276

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 103/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L   +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEHLELSHEEETRFFELVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALNI----ISQYHLKEIGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +    +++VSNPPYI       L 
Sbjct: 139 YASDISPKALEVALKNIERFCLKERVFLKQTRLWDHMP-TIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    ++          E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAKLKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|330954447|gb|EGH54707.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae Cit 7]
          Length = 302

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A     P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGIACADVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|159902894|ref|YP_001550238.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9211]
 gi|159888070|gb|ABX08284.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9211]
          Length = 293

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 7/221 (3%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E +  ++G   + + +L ++S  F PR ETE+LV+ AL     +     V R  DLGT
Sbjct: 76  ENEPLQYLVGKCPWRDFQLEINSSVFIPRQETEILVELALK----KCNGISVGRWADLGT 131

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163
           G+G + +AL +  P + G  VD S  AL +AK N      +         W+  +    G
Sbjct: 132 GSGVLAVALARSLPGWIGDAVDCSKDALSLAKKNLANLANNSHVHFHLGHWWQPLKSWWG 191

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +D++++NPPYI S ++  L   VRD +P ++L GG+DG++  R I  G  + L   G  
Sbjct: 192 TYDLVLANPPYIPSAVLSELHPIVRDNEPHLALSGGLDGMNCCREIIRGAKKGLGTGGWL 251

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             E  Y+Q   ++    +     VN   D  G  R  +  +
Sbjct: 252 IFEHHYDQSERLLNELIANGFKEVNFENDLEGVRRFAIGRK 292


>gi|294340107|emb|CAZ88478.1| putative S-adenosyl-L-methionine-dependent methyltransferases
           /Modification methylase HemK [Thiomonas sp. 3As]
          Length = 324

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 6/232 (2%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L   Q   L   I R +  E I  + GW+ F  + L  S +   PR E+ELL   A    
Sbjct: 78  LSAAQLEALDGLIERRVAGEPIAYLTGWQRFMGLELRASPEALIPRAESELLGQIAAQKL 137

Query: 90  LPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               E       ++D+  G+G + LAL    P  +  G DIS  A+++A++N     + +
Sbjct: 138 RSMAEAAATPPIVIDVCCGSGNLALALAHAVPQAQVHGADISQTAIDLARANTQNLDLGQ 197

Query: 149 RFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           R      D  +      +G  D++VS PPYI +  +D +  E+   +P ++ DGG  G+ 
Sbjct: 198 RVSLHTGDLLAPFGAEFQGKVDLVVSLPPYISTAKLDTMPHEIVGHEPHLAFDGGPFGVR 257

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGG 255
               +       L   G   +E+G  Q   ++++ E    +  V    D  G
Sbjct: 258 ILMRLIREAPPLLRPGGWLGMEVGLGQGPAMMQLLEKHPAYDRVETVCDAQG 309


>gi|282917466|ref|ZP_06325219.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|283771285|ref|ZP_06344174.1| HemK protein [Staphylococcus aureus subsp. aureus H19]
 gi|282318668|gb|EFB49025.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|283459490|gb|EFC06583.1| HemK protein [Staphylococcus aureus subsp. aureus H19]
          Length = 278

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY  +  
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRKFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ IA++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNIARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|238912336|ref|ZP_04656173.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Tennessee
           str. CDC07-0191]
          Length = 310

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNRFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  + +     +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPNVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|215430187|ref|ZP_03428106.1| hypothetical protein MtubE_05798 [Mycobacterium tuberculosis
           EAS054]
          Length = 289

 Score =  214 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 22  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 80  VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 134

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 135 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 195 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 252

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 253 LVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|78485887|ref|YP_391812.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thiomicrospira crunogena XCL-2]
 gi|78364173|gb|ABB42138.1| modification methylase, HemK family [Thiomicrospira crunogena
           XCL-2]
          Length = 310

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 2   QALRDSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILG 56
            A  D+   +         +    ++      L   ++  +T+   + ++  +    + G
Sbjct: 38  NAFDDARVLVFYALRLPWDIPETYLLSR----LTITEKREVTDLFRQRIESRKPTPYLTG 93

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              F  ++  +S  T  PR     L+        P +E   V RILDL TG+G + LA L
Sbjct: 94  EAWFAGLKFKVSEATLVPRSPIAELIAQ---EYRPWVEPESVHRILDLCTGSGCIGLASL 150

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
           +  P      VDIS +ALE+A+ N     + +    +QSD FS++ G  +D+IVSNPPY+
Sbjct: 151 QACPNATVDLVDISPEALEVAQRNIEMYHLDDVATAIQSDLFSALSGRKYDLIVSNPPYV 210

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +++ +D L  E    +PR+ L+ G DGL   R I    S +LN++G   VE+G +Q   +
Sbjct: 211 DAIEMDALPEEFHQ-EPRLGLEAGPDGLDLVRRILAEASAYLNEEGTLIVEVGVSQ-FYL 268

Query: 236 VRIFESRKLFLVNA 249
            + +     +    
Sbjct: 269 EQTYPELPFYWFEF 282


>gi|315586963|gb|ADU41344.1| protoporphyrinogen oxidase [Helicobacter pylori 35A]
          Length = 276

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + R L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLKKERVFLHTHAYLELNHEEEVRFFEWVERRLNDCPIEYLLESCDFYGHS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|301770295|ref|XP_002920605.1| PREDICTED: hemK methyltransferase family member 1-like [Ailuropoda
           melanoleuca]
          Length = 358

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 78/279 (27%), Positives = 121/279 (43%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  RQ   +     R L+   +  ILG  
Sbjct: 59  EAQASSEYIVAHVLG-AKTFQSLRPVLWTQPLTPRQLQCVQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L   A S   +  +    IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLKMVPPVFIPRPETEELVEWVLEEVAQSPCAMGAQGGPLILEVGCGSGAIALSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSV-EGLFDVI 168
           L + P  + + VD    A+ + + NA    + +R         L+  W   +  G  D++
Sbjct: 178 LSQLPQSRVIAVDKGEAAICLTQENAQRLQLLDRIQIVPLDVTLEGSWAHLLTWGPMDLV 237

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+R ++  ++LDGG +G+     I       L   G   +E+ 
Sbjct: 238 VSNPPYIFHRDMEQLAPEIRSYEDPLALDGGEEGMDIITYILALAPWLLKDSGSIFLEVD 297

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +SR    L LV   +D+ G  R L   R
Sbjct: 298 PRHPELVGSWLQSRPDLSLDLVAVRRDFCGRSRFLHIRR 336


>gi|190150270|ref|YP_001968795.1| adenine-specific methylase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307263609|ref|ZP_07545223.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915401|gb|ACE61653.1| hypothetical adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871072|gb|EFN02802.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 314

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 16/260 (6%)

Query: 12  CRVTGLSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
                LS+  + +D P+++    L   ++  +   +++ L   + I  +     F     
Sbjct: 53  SHQLVLSALNLPIDVPEAMYSSNLTRIEKERIIEMVIQRLGMRKPIAYLTNSAWFCGAEY 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  +  
Sbjct: 113 YVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEVD 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +D + 
Sbjct: 169 AVDLSLDALDVAQINIERHQVAHRVFPISSDLFTDIPQDKYDLIVTNPPYVDQEDLDDMP 228

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S   
Sbjct: 229 QEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLIEQFPSVPF 286

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V       G   V    R
Sbjct: 287 HWVELK---NGGLGVFTLTR 303


>gi|238060789|ref|ZP_04605498.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
 gi|237882600|gb|EEP71428.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
          Length = 329

 Score =  214 bits (547), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 22/282 (7%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           +++ R ++      V G+   ++ +     L   Q       + R +  E +  + G   
Sbjct: 15  IESPRVEAELLAAHVLGVPRGRLALA--DRLSPDQLERYDALVARRVAREPLQHLTGKAA 72

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI---------EKRDVVRILDLGTGTGA 110
           F ++ L +    F PRPETELL    +  +  R                 ++DL +G+GA
Sbjct: 73  FRHLELAVGPGVFVPRPETELLAGWGVDQARLRACDPTAGGGQGATGGPLVVDLCSGSGA 132

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEG 163
           + LA+ +E+P  + V V+ S  AL   + NA     +          D         + G
Sbjct: 133 IALAVAQEAPAARVVAVERSPAALAWLRRNAADRAAAGDRPVEVVAADVTDPGLLGELVG 192

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             DV++ NPPY+   +   +  EV   DP  ++ GG DGL   R +    ++ L   G+ 
Sbjct: 193 RVDVLLCNPPYVPRAV--QVPPEVAAHDPDEAVFGGADGLDVIRPVLARAAQLLRPGGVL 250

Query: 224 SVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            VE        V  +  +      +   +D  G  R     R
Sbjct: 251 GVEHDDTHGAAVPALLAADGRYEEIVEHRDLAGRPRFATARR 292


>gi|16761309|ref|NP_456926.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
 gi|16765712|ref|NP_461327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. LT2]
 gi|29140995|ref|NP_804337.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           Ty2]
 gi|207857803|ref|YP_002244454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Enteritidis
           str. P125109]
 gi|213160946|ref|ZP_03346656.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E00-7866]
 gi|213426187|ref|ZP_03358937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E02-1180]
 gi|213582768|ref|ZP_03364594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-0664]
 gi|213616434|ref|ZP_03372260.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-2068]
 gi|213650420|ref|ZP_03380473.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
 gi|213857263|ref|ZP_03384234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           M223]
 gi|224583126|ref|YP_002636924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi C
           strain RKS4594]
 gi|289826755|ref|ZP_06545700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E98-3139]
 gi|61250532|sp|P0A293|YFCB_SALTY RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|61250534|sp|P0A294|YFCB_SALTI RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|25512989|pir||AG0804 conserved hypothetical protein STY2617 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16420929|gb|AAL21286.1| putative methylase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16503608|emb|CAD07617.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136620|gb|AAO68186.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|206709606|emb|CAR33951.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467653|gb|ACN45483.1| hypothetical protein SPC_1320 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247591|emb|CBG25418.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994488|gb|ACY89373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 14028S]
 gi|301158943|emb|CBW18456.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913376|dbj|BAJ37350.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. T000240]
 gi|320086818|emb|CBY96590.1| putative adenine-specific methylase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222913|gb|EFX47984.1| Ribosomal protein L3 methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323130718|gb|ADX18148.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. 4/74]
 gi|326624209|gb|EGE30554.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Dublin str.
           3246]
 gi|332989318|gb|AEF08301.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. UK-1]
          Length = 310

 Score =  214 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|330986203|gb|EGH84306.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 302

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +   T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDHVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  ++  +  GG+   +L
Sbjct: 267 PEVDFAWLDFQR--GGHGVFML 286


>gi|325578261|ref|ZP_08148396.1| protein-(glutamine-N5) methyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159997|gb|EGC72126.1| protein-(glutamine-N5) methyltransferase [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 314

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F  +   +   T  PR     L+  
Sbjct: 73  FNSKLTHSEKETLVQLVLSRIEQRVPVAYLTNSAWFCGLEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
             A  L    K +  RILDL TG+G + +A  +  P  +   VD+S  AL +A+ N   +
Sbjct: 133 KFAPLL----KSEPKRILDLCTGSGCIAIATAEAFPEAEVDAVDLSVDALNVAEINIARH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QSD F ++ G  +D+IV+NPPY++   +  +  E   ++P ++L  G+DGL
Sbjct: 189 QLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEEDLADMPEEF-HYEPELALGSGVDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
              + I      +L  +G+   E+G N  V ++  +       V 
Sbjct: 248 EITKQILKQAPDYLTPNGMLICEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|300858257|ref|YP_003783240.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685711|gb|ADK28633.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205978|gb|ADL10320.1| Putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Corynebacterium pseudotuberculosis
           C231]
 gi|302330531|gb|ADL20725.1| Putative protoporphyrinogen oxidase HemK [Corynebacterium
           pseudotuberculosis 1002]
 gi|308276213|gb|ADO26112.1| methylase of peptide chain release factors [Corynebacterium
           pseudotuberculosis I19]
          Length = 272

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 103/263 (39%), Gaps = 14/263 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      + G +  ++ +       D         + R  + E +  I+G   F  
Sbjct: 21  PRNDAQIIAAHLLGCTLMELGLRMREPTPD----QFEALVARRAQREPLQHIIGKAWFGP 76

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+              ++DL TG+GA+   +    P  
Sbjct: 77  LILKVGPGVFIPRPETEVLADWAVQQL------SGGETVVDLCTGSGALAAYVATLVPTT 130

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   V++S  A   A+ N   +      D    +    + G  DV+VSNPPY+       
Sbjct: 131 KVTAVELSPSAAHYAQENLPPSVNLIIGDATDPNVLRPLMGTVDVLVSNPPYVP--ETPD 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV  +DP +++  G DG+   + +   +   L   G   +E      + V++ F + 
Sbjct: 189 LTPEVY-YDPAMAVFSGKDGMDMIKLLIPVIHELLAPHGRVGIEHDDATSLAVLQEFRAH 247

Query: 243 -KLFLVNAFKDYGGNDRVLLFCR 264
                +   KD  G +R +   +
Sbjct: 248 GGFEEITVVKDLTGRNRFVTASK 270


>gi|291294531|ref|YP_003505929.1| modification methylase HemK family [Meiothermus ruber DSM 1279]
 gi|290469490|gb|ADD26909.1| modification methylase, HemK family [Meiothermus ruber DSM 1279]
          Length = 307

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 8/262 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +S   L     L+  Q+       +           +   L    +  +LG  +FY 
Sbjct: 24  PAVESRWILTHAARLNDAQLAARLTQPVPPDVEEAAWAMLDLRLSGHPLQLLLGESEFYG 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL ++     PRPETE LV+ AL      +       +LD+GTG+GA+ LA+    P  
Sbjct: 84  LRLKVARGVLIPRPETEGLVERALT----HLPLDAPAWVLDVGTGSGAIALAIKAMRPQA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DI+ KALE+AK NA+  G+      L++ + +++ GL D+++SNPPY+     + 
Sbjct: 140 TVWATDINPKALELAKENALHLGLE--VSFLEAPFTANLTGL-DLVISNPPYLPESYREE 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              E   ++   +L  G +GL   R +       L   G   +E+       ++    ++
Sbjct: 197 APPE-LAYEDERALYAGPEGLDVARALLPQAWDALQPGGWLWLELAPENVYTLLEEAIAQ 255

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
                  F+D     R L   +
Sbjct: 256 GWREARVFRDLAQRPRYLGAQK 277


>gi|90414824|ref|ZP_01222791.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
 gi|90324067|gb|EAS40654.1| putative adenine-specific methylase [Photobacterium profundum 3TCK]
          Length = 310

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSSERLRVVERVIRRINDRTPVSYMTNKAYFCGLEFFVDERVLVPRSPIAELIETQFEP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +    +  RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ +
Sbjct: 128 FLQQ----EPTRIMDLCTGSGCIGIACAHAFPDAEVDLVDISIDALAVAEQNINDHGLEQ 183

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   L+SD    V +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R
Sbjct: 184 QVIPLRSDLLRDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  DG+   E+G N  V + + + +     +      GG+  V +  R
Sbjct: 243 RILANAPDYLKDDGILICEVG-NSMVHMEQQYPNIPFTWIEFAN--GGHG-VFMMTR 295


>gi|145596154|ref|YP_001160451.1| HemK family modification methylase [Salinispora tropica CNB-440]
 gi|145305491|gb|ABP56073.1| modification methylase, HemK family [Salinispora tropica CNB-440]
          Length = 309

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 16/260 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++      V G+   ++ +     L   QR      + R    E +  + G   F ++ L
Sbjct: 36  EAEVLAAYVLGVPRGRLALADG--LSPDQRRRFDALVARRADREPLQHLTGSAPFRHLEL 93

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETELL    +  +     +     ++DL +G+GA+ LA+ +E P  + V
Sbjct: 94  AVGPGVFVPRPETELLAGWGVEQAR----REAAPLVVDLCSGSGAIALAVAQEVPAARVV 149

Query: 126 GVDISCKALEIAKSNAV-TNGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            V+ S  AL   + NA     V +R       D   SD    + G  DV++ NPPY+ + 
Sbjct: 150 AVEGSPAALSWLRRNATSRAAVGDRPVEVVAADVTASDLLDDLLGRVDVLLCNPPYVPAG 209

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +V  +  EV   DP  ++  G+DGL+  R +    +  L   G   +E    Q   V  +
Sbjct: 210 VV--VPPEVSRHDPARAVFAGMDGLAVIRPVVPRAAVLLRPGGRLGIEHDDTQGAAVPGL 267

Query: 239 FESRK-LFLVNAFKDYGGND 257
                    +    D  G  
Sbjct: 268 LAGDGRYDSIADHADLAGRP 287


>gi|203284117|ref|YP_002221857.1| HemK family methylase [Borrelia duttonii Ly]
 gi|201083560|gb|ACH93151.1| HemK family methylase [Borrelia duttonii Ly]
          Length = 277

 Score =  214 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 8/247 (3%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           +   +  + +  L  ++ + L + I        IH ILG ++F  ++  ++     PR +
Sbjct: 31  NKELIFANTNKNLTQQEEYKLFSQIKNIKSGIPIHYILGTKEFMGIKFYINKHVLIPRDD 90

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV+ AL     +I+K ++ +ILDL  G+G + L +       K    DIS +AL+++
Sbjct: 91  TECLVEEALI----QIKKNNLSKILDLCCGSGCIGLTIAYYLKQ-KVTLADISAQALKVS 145

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N     ++   +  +S+    +   F++I++NPPY+    +       +  +PRI+L 
Sbjct: 146 LKNTQRLNLTNHIEIKRSNLLKYIGKKFELIITNPPYLTKDELRIKEKLAK--EPRIALL 203

Query: 198 G-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           G G DGL   + I       L K+GL  +E+   QK  + +         +    D    
Sbjct: 204 GFGQDGLKIAKKIIKQAKYKLTKNGLLILEMAPWQKKSLEKFAIQEGFTSLKTIYDIENR 263

Query: 257 DRVLLFC 263
           +R LL  
Sbjct: 264 ERALLLR 270


>gi|297588766|ref|ZP_06947409.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC
           53516]
 gi|297574139|gb|EFH92860.1| protein-(glutamine-N5) methyltransferase [Finegoldia magna ATCC
           53516]
          Length = 263

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 75/268 (27%), Positives = 123/268 (45%), Gaps = 27/268 (10%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L ++   S    I+  +  + D     +        +   I  ILG++ FYN + 
Sbjct: 14  DCLMILEKLYNYSFSDSIIHSNDEISDDDEKTILEYKKLYDEDIPIEYILGFKYFYNRKF 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI---------LDLGTGTGAVCLALL 116
               +   PR +TE+LVD  +  +       ++            L+L            
Sbjct: 74  YTDPNVLIPRFDTEILVDEIIKTNRKFDNILEIGIGSGIISITLNLEL------------ 121

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 K +GVDI+ KA+E++K NA +   +   + + SD + +V   +D+IVSNPPYI+
Sbjct: 122 ----DSKVLGVDINEKAIELSKKNAESLNAT-NVEFVYSDLYENVNSKYDLIVSNPPYID 176

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + L  ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGYNQ+  + 
Sbjct: 177 KKDFNSLETKILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIF 235

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I +          KD+ G DRV++  R
Sbjct: 236 EILDENGFKNHYCIKDFNGFDRVIIARR 263


>gi|311114830|ref|YP_003986051.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis
           ATCC 14019]
 gi|310946324|gb|ADP39028.1| protein-(glutamine-N5) methyltransferase [Gardnerella vaginalis
           ATCC 14019]
          Length = 302

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 19/275 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  D+   L    G+S   +    I+              ++ I R    E +  I+G  
Sbjct: 23  AEYDARLLLAHACGVSLADLNKALILGDFKDFLPNYASKYSDFISRRASREPLQHIIGCA 82

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +    F PRPETE++V   L +      K  +  +LDL  G+GA+ L++  E
Sbjct: 83  TFRYIDLIVGKGVFVPRPETEVVVQEGLDWIRANNLKNPI--VLDLCAGSGAIGLSVASE 140

Query: 119 SPFFKGVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDW-------FSSVEGLFDV 167
               +   V+ S KA E  + N    A    +  R+  +  D         ++++   DV
Sbjct: 141 VADAQVWAVEKSPKAFEYLQKNYNKIAEKYNILNRYHAILGDATNVNLPEKAAIKEKVDV 200

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++NPPY+         +E RD+DP+++L GG  DGL   + I      +L + G+  +E
Sbjct: 201 VITNPPYVPESQPVE-QIEARDYDPKMALYGGSQDGLLIPQKIVKASFAYLRRGGIMIME 259

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
               Q   +    ++          D     R ++
Sbjct: 260 HDITQGEALADYAKNVGFSSAKVKNDLTNRARFVV 294


>gi|330445416|ref|ZP_08309068.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489607|dbj|GAA03565.1| -(glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 310

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D      DS L   +R  +   ++R +     +  +     F  +   +   
Sbjct: 50  LPTLYLPLDVPPEVRDSRLTSSERHRIVERVIRRINERTPVSYLTNIAYFCGMEFFVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     L +    +  RI+DL TG+G + +A     P  +   VDIS
Sbjct: 110 VLIPRSPIGELIENRFEPFLSQ----EPTRIMDLCTGSGCIGIACAHMFPEAEVDIVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+ ++   L+SD    V +  +D++V+NPPY++   +D L  E R 
Sbjct: 166 PDALAVAEQNIADHGLEQQVIPLRSDLLRDVPKDKYDLLVTNPPYVDQEDMDSLPDEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L +DG+   E+G N  + +   +       +  
Sbjct: 225 HEPELGLAAGSDGLKLVRRILANAPDYLKEDGILICEVG-NSMIHMEEQYPHIPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D GG+  V +  R
Sbjct: 284 --DNGGHG-VFMLTR 295


>gi|307261431|ref|ZP_07543104.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306868888|gb|EFN00692.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 314

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 16/260 (6%)

Query: 12  CRVTGLSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
                LS+  + +D P+++    L   ++  +   +++ L   + +  +     F     
Sbjct: 53  SHQLVLSALNLPIDVPEAMYSSNLTRIEKERIIEMVIQRLGMRKPVAYLTNSAWFCGAEY 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  +  
Sbjct: 113 YVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEVD 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +D + 
Sbjct: 169 AVDLSLDALDVAQINIERHQVAHRVFPISSDLFTDIPQDKYDLIVTNPPYVDQEDLDDMP 228

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S   
Sbjct: 229 QEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLIEQFPSVPF 286

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V       G   V    R
Sbjct: 287 HWVELK---NGGLGVFTLTR 303


>gi|82751718|ref|YP_417459.1| hypothetical protein SAB2001c [Staphylococcus aureus RF122]
 gi|82657249|emb|CAI81690.1| conserved hypothetical protein [Staphylococcus aureus RF122]
 gi|298695391|gb|ADI98613.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323439334|gb|EGA97058.1| HemK family modification methylase [Staphylococcus aureus O11]
 gi|323442457|gb|EGB00086.1| HemK family modification methylase [Staphylococcus aureus O46]
          Length = 278

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILSKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|322514692|ref|ZP_08067720.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC
           25976]
 gi|322119390|gb|EFX91499.1| protein-(glutamine-N5) methyltransferase [Actinobacillus ureae ATCC
           25976]
          Length = 314

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 106/261 (40%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVR 64
           ++H  +     L          S L   ++  +   + + L   + +  +     F    
Sbjct: 52  EAHQLVLSALNLPIDVPEAMYSSNLTHIEKERIIEMVQQRLGMRKPVAYLTNSTWFCGAE 111

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  + 
Sbjct: 112 YYVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEV 167

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
             VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +  +
Sbjct: 168 DAVDLSLDALDVAQINIEHHQVAHRVFPISSDLFTDIPQDKYDLIVTNPPYVDQEDLGYM 227

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S  
Sbjct: 228 PQEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLMEQFPSVP 285

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              V       G   V    R
Sbjct: 286 FHWVELK---NGGLGVFTLTR 303


>gi|304383731|ref|ZP_07366190.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM
           16973]
 gi|304335255|gb|EFM01526.1| protein-(glutamine-N5) methyltransferase [Prevotella marshii DSM
           16973]
          Length = 280

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 97/264 (36%), Gaps = 2/264 (0%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    GLS   +     + L       L   ++R  + E +  +LG   FY
Sbjct: 18  EAKAIVRIVLEERFGLSVTDIYTGKVTQLSAHAVAELRKIMMRLEQAEPVQYVLGKACFY 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               T+S     PRPETE L    +   L      +   +LD+GTG+G +   L    P 
Sbjct: 78  GRSFTVSQGVLIPRPETEDLCTWVIETVLSSFSCPEPC-LLDIGTGSGCIAATLALNIPH 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DIS +AL +A++N      S     + +    S    +++IVSNPPYI      
Sbjct: 137 AHVSAWDISPEALVVARANVKALKASVDVAEVDALNLPSDSDRWEIIVSNPPYICRKEKA 196

Query: 182 CLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            +   V  ++P  +L     D L  YR IA      L   G+   EI       +  +  
Sbjct: 197 DMEDNVVCYEPAEALFVPDDDPLLFYRAIARYAFSALRVGGMLFFEINPLYVQSLETLLC 256

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                      D  G  R +   R
Sbjct: 257 ETGFKDTELKLDRFGRQRFIKVMR 280


>gi|323936620|gb|EGB32907.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1520]
 gi|323940973|gb|EGB37160.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E482]
          Length = 421

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|317182326|dbj|BAJ60110.1| protoporphyrinogen oxidase [Helicobacter pylori F57]
          Length = 274

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVHFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAKFYKDLSGFDRGFIG 269


>gi|187931125|ref|YP_001891109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712034|gb|ACD30331.1| modification methylase, HemK family [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 314

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 68  RLLTEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 128 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEDANITLVDISDDALTVANHNIKKHQLS 185

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   +D +  E   ++P+++L+ G DGL   
Sbjct: 186 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKQDLDTMPHEY-HYEPKLALEAGDDGLDLA 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        + +F D  G D V L  
Sbjct: 245 KRIILEADKYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWL-SFAD--GGDGVFLLT 297


>gi|54308160|ref|YP_129180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photobacterium profundum SS9]
 gi|46912588|emb|CAG19378.1| putative adenine-specific methylase [Photobacterium profundum SS9]
          Length = 310

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSSERLRVVERVIRRINDRTPVSYMTNKAYFCGLEFFVDERVLVPRSPIAELIETRFEP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +       RI+DL TG+G + +A     P  +   VDIS  AL +A+ N   +G+ +
Sbjct: 128 FLQQA----PTRIMDLCTGSGCIGIACAHAFPEAEVDLVDISIDALAVAEQNIQDHGLEQ 183

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   L+SD    V +  +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R
Sbjct: 184 QVIPLRSDLLRDVPKDKYDLIVTNPPYVDQEDMDNLPEEFR-HEPELGLAAGTDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  DG+   E+G N  V + + + +     +      GG+  V +  R
Sbjct: 243 RILANAPDYLKDDGILICEVG-NSMVHMEQQYPNIPFTWIEFAN--GGHG-VFMMTR 295


>gi|295428704|ref|ZP_06821330.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|283471334|emb|CAQ50545.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus ST398]
 gi|295127374|gb|EFG57014.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
          Length = 277

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 24  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 84  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 138 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 196 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 255

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 256 PDKKIDIIKDINGHDRIVSF 275


>gi|74312848|ref|YP_311266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sonnei Ss046]
 gi|73856325|gb|AAZ89032.1| putative adenine-specific methylase [Shigella sonnei Ss046]
          Length = 421

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|49484341|ref|YP_041565.1| hypothetical protein SAR2205 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257426256|ref|ZP_05602671.1| modification methylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428914|ref|ZP_05605308.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257431523|ref|ZP_05607896.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257434232|ref|ZP_05610582.1| modification methylase [Staphylococcus aureus subsp. aureus E1410]
 gi|257437145|ref|ZP_05613185.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M876]
 gi|282904786|ref|ZP_06312660.1| N5 glutamine methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906461|ref|ZP_06314312.1| protein-glutamine-N5 methyltransferase release factor-specific
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909430|ref|ZP_06317245.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911682|ref|ZP_06319481.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914966|ref|ZP_06322746.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M899]
 gi|282920295|ref|ZP_06328019.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925506|ref|ZP_06333160.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C101]
 gi|283958897|ref|ZP_06376342.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293509034|ref|ZP_06667821.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510949|ref|ZP_06669648.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M809]
 gi|293547551|ref|ZP_06672226.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|297589816|ref|ZP_06948456.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|49242470|emb|CAG41186.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257270961|gb|EEV03134.1| modification methylase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274256|gb|EEV05773.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257277764|gb|EEV08434.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257280871|gb|EEV11016.1| modification methylase [Staphylococcus aureus subsp. aureus E1410]
 gi|257283538|gb|EEV13665.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M876]
 gi|282312907|gb|EFB43308.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C101]
 gi|282316155|gb|EFB46536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282321169|gb|EFB51500.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M899]
 gi|282324447|gb|EFB54760.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282326700|gb|EFB56998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282330411|gb|EFB59929.1| protein-glutamine-N5 methyltransferase release factor-specific
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282594819|gb|EFB99796.1| N5 glutamine methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus C160]
 gi|283789615|gb|EFC28438.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919671|gb|EFD96744.1| N5 glutamine methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291094738|gb|EFE25010.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466234|gb|EFF08761.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus M809]
 gi|297576944|gb|EFH95658.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312437465|gb|ADQ76536.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315193282|gb|EFU23680.1| hypothetical protein CGSSa00_02196 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 278

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|109897861|ref|YP_661116.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas atlantica T6c]
 gi|109700142|gb|ABG40062.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Pseudoalteromonas atlantica T6c]
          Length = 309

 Score =  214 bits (546), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 12/250 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
           ++   +     L    +    + +    L   ++  +   + R  +    +  ++    F
Sbjct: 45  EAVCLVLHTLNLPQDMLEQTGEQLFQARLTQIEKRDIAALVQRRAEERIPLPYLMHQAWF 104

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+D   A  +          ILDL TG G + +AL     
Sbjct: 105 CGLPFYVDERVLIPRSPIAELIDDKFANWVST----PPTHILDLCTGGGCIAIALAYAFE 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
                 VDIS +ALE+A+ N   + +S+R   +QSD  +++EG  +D+I+SNPPY+++  
Sbjct: 161 SATVDAVDISPEALEVAEMNIHEHQLSDRVYPIQSDLMAALEGQKYDLIISNPPYVDAED 220

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +P ++L  G DGL     +      HL  DG   VE+G +Q   +  I+
Sbjct: 221 MADLPEEF-HHEPELALAAGDDGLDLVHKMLRQAPAHLTDDGWLFVEVGNSQ-FHMEHIY 278

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 279 PDLALQWVEF 288


>gi|332278517|ref|ZP_08390930.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|332100869|gb|EGJ04215.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
          Length = 421

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|283783534|ref|YP_003374288.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis 409-05]
 gi|283441994|gb|ADB14460.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Gardnerella vaginalis 409-05]
          Length = 304

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 26/285 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  D+   L    G+S  ++    I+   +          ++ I R    E +  I+G  
Sbjct: 23  AEYDARLLLAHACGVSLAELNKALILGDLTDFSQDYASKYSDFISRRASREPLQHIVGRA 82

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +    F PRPETE++V++ L +   R      + ++DL  G+GA+ L++  E
Sbjct: 83  PFRYLDLQVGKGVFVPRPETEIVVEAGLDWL--RESGISKLTVVDLCAGSGAIGLSIAAE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTN-------GVSERFDTLQSDW-----------FSS 160
               +   V+ S +A +  + N            +  R+  + +D              +
Sbjct: 141 VADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVLADATKSHISDCTPELHA 200

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNK 219
           + G  D++++NPPY+    V    +EVR++DP ++L GG  DGL     I       L  
Sbjct: 201 ICGKVDLVITNPPYVPESQVPE-QVEVREYDPPVALYGGSADGLLIPEQIMRAAFALLKS 259

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G   +E   +Q   + +  ES          D  G  R     +
Sbjct: 260 GGAMVMEHDISQGDALKKYAESVGFSRARVGNDLTGRPRYTFAQK 304


>gi|212716436|ref|ZP_03324564.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660689|gb|EEB21264.1| hypothetical protein BIFCAT_01360 [Bifidobacterium catenulatum DSM
           16992]
          Length = 326

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 14/240 (5%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
               + + R  K E +  I G   F  + L +    F PRPETEL+V   + ++      
Sbjct: 86  ERFHSMVDRRAKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGIEWTTRHGMY 145

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNG 145
           R   +++DL  G+GA+ LA   E P  +   V+ S +  +  + N             N 
Sbjct: 146 R--AKVVDLCAGSGAIGLAFATEVPGSEVWAVEKSERTAQWTRRNLDETTKRYPAIAGNY 203

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLS 204
             E  D  Q    + ++G  D++++NPPY+    +  +  EVRD+DP ++L GG  DG  
Sbjct: 204 HLEIADATQMPTLNQLDGTIDIVLTNPPYVPLSDIP-VQPEVRDYDPDLALYGGSADGTL 262

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               I    S+ L   GL  +E    Q   +     +     V    DY G  R L   +
Sbjct: 263 IPERIISRASKLLKPGGLMVMEHDVTQGERLAAFARTCDFVDVVVHNDYTGRPRYLTAEK 322


>gi|317011269|gb|ADU85016.1| protoporphyrinogen oxidase [Helicobacter pylori SouthAfrica7]
          Length = 278

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 99/258 (38%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+ ++       + + L    I  +L    FY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEYLELNHKEEMRFFELVEKRLNDYPIEYLLESCSFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ITQYHLKEIGEIGIGSACVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  ALE+A  N     + +R    Q+  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISPNALEVASKNIERFDLKKRIFLKQTHLWDHMPTT-PMLISNPPYIAKNYP--LD 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +           E+G++Q   +    E    
Sbjct: 196 KSVLK-EPHKALFGGVKGDEILKEIIFLAAGLQIP--FLVCEMGHDQLESLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|110806296|ref|YP_689815.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 5 str. 8401]
 gi|110615844|gb|ABF04511.1| putative adenine-specific methylase [Shigella flexneri 5 str. 8401]
 gi|323944843|gb|EGB40909.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H120]
          Length = 421

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|253731045|ref|ZP_04865210.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725233|gb|EES93962.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 278

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +  EG   + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I D +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIDDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|269941716|emb|CBI50123.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|329314802|gb|AEB89215.1| Modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329723986|gb|EGG60510.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21189]
          Length = 277

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 24  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 84  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +  EG   + ++SNPPYI+   +  +
Sbjct: 138 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 196 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 255

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 256 PDKKIDIIKDINGHDRIVSF 275


>gi|57652139|ref|YP_186924.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus COL]
 gi|151222233|ref|YP_001333055.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510322|ref|YP_001575981.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141636|ref|ZP_03566129.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|258453173|ref|ZP_05701164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5948]
 gi|262049284|ref|ZP_06022159.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30]
 gi|262052619|ref|ZP_06024813.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3]
 gi|282923105|ref|ZP_06330790.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9765]
 gi|284025151|ref|ZP_06379549.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           132]
 gi|294850087|ref|ZP_06790824.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A9754]
 gi|304379298|ref|ZP_07362037.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|57286325|gb|AAW38419.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus COL]
 gi|150375033|dbj|BAF68293.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160369131|gb|ABX30102.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257859119|gb|EEV81976.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5948]
 gi|259159489|gb|EEW44539.1| hypothetical protein SA930_2016 [Staphylococcus aureus 930918-3]
 gi|259162649|gb|EEW47216.1| hypothetical protein SAD30_0495 [Staphylococcus aureus D30]
 gi|282593296|gb|EFB98293.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9765]
 gi|294823035|gb|EFG39467.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A9754]
 gi|302751998|gb|ADL66175.1| modification methylase HemK family protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304342157|gb|EFM08057.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315196949|gb|EFU27291.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320140711|gb|EFW32563.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320143687|gb|EFW35464.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA177]
          Length = 278

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +  EG   + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|253733049|ref|ZP_04867214.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253728957|gb|EES97686.1| HemK family methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 278

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +  EG   + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|62180957|ref|YP_217374.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62128590|gb|AAX66293.1| putative methylase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715437|gb|EFZ07008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 310

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|315077779|gb|EFT49830.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL053PA2]
          Length = 291

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 108/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLIRVASVNADDEDR--FNQMVDRRRSGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FDV+V+NPPY+    V
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDGRRFDVVVTNPPYLRRSDV 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|229142070|ref|ZP_04270595.1| Protein hemK [Bacillus cereus BDRD-ST26]
 gi|228641359|gb|EEK97665.1| Protein hemK [Bacillus cereus BDRD-ST26]
          Length = 213

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 7/212 (3%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G   FY     ++ +   PRPETE L+   L          + + + D+GTG+GA+ + 
Sbjct: 2   IGHEMFYGRSFFVNEEVLIPRPETEELIVGVLERIERHFS-DEKIHVADIGTGSGAISIT 60

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSN 171
           L  E+       VDI+  ++E+AK NA T G          D  S         DV+VSN
Sbjct: 61  LALENKNLHVYTVDIAQGSIEVAKENAKTLGAE--VTFYHGDLLSPFYETGQKLDVVVSN 118

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI       L   V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q
Sbjct: 119 PPYIPEEDWRGLSPVVKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGIGQ 178

Query: 232 KVDVVRIFESR-KLFLVNAFKDYGGNDRVLLF 262
             DV  + +       V    D  G DR++  
Sbjct: 179 GEDVKGLLQQAFPHAHVEVVFDINGKDRMVFA 210


>gi|317180127|dbj|BAJ57913.1| protoporphyrinogen oxidase [Helicobacter pylori F32]
          Length = 276

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLKSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|26248718|ref|NP_754758.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli CFT073]
 gi|26109124|gb|AAN81326.1|AE016764_8 Hypothetical adenine-specific methylase yfcB [Escherichia coli
           CFT073]
          Length = 421

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|145222896|ref|YP_001133574.1| HemK family modification methylase [Mycobacterium gilvum PYR-GCK]
 gi|315443361|ref|YP_004076240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycobacterium sp. Spyr1]
 gi|145215382|gb|ABP44786.1| modification methylase, HemK family [Mycobacterium gilvum PYR-GCK]
 gi|315261664|gb|ADT98405.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycobacterium sp. Spyr1]
          Length = 289

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 109/265 (41%), Gaps = 14/265 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              D+      V G     V  V+PD+           +   R      +  + G   F 
Sbjct: 29  PRVDAELLAAHVAGTDRGLVAFVEPDAAF----LSRYRDLTARRAARVPLQHLTGTAAFG 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V + +    F PRPETE L++ ALA  L         RI+DL TG+GA+ LAL +  P 
Sbjct: 85  PVVVDVGPGVFIPRPETESLLEWALAQPLS-----GSARIVDLCTGSGALALALAQGFPG 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                VD S  AL   + N     V   R D   +   + ++   D++VSNPPYI     
Sbjct: 140 ATVFAVDDSDDALVYTRRNTAGTAVHVVRADVTDAGLLTELDRSVDLLVSNPPYIP--DA 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             L  EV + DP  +L GG DG++    +A   +R L   G C+VE   +     V +F 
Sbjct: 198 AELEPEVAEHDPAHALYGGADGMAVIEHLAGVAARLLRPGGRCAVEHDDSTSQATVEVFV 257

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     V A  D  G  R +   R
Sbjct: 258 RAGGFTEVTARHDLTGRPRFVTAVR 282


>gi|302345995|ref|YP_003814348.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica ATCC 25845]
 gi|302149582|gb|ADK95844.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Prevotella melaninogenica ATCC 25845]
          Length = 287

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 10/271 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A       L    G++   +     + L       L   I+R  + E +  +LG   F 
Sbjct: 18  EAQAIVRLVLEVQFGITLPDIYTGKVNELSREAEEELEKIILRLERSEPVQYVLGRETFC 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFS---LPRIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L       +      ++    +++LD+GTG+G + + L  +
Sbjct: 78  GRTFHVAPGVLIPRPETEVLCRWIEEDNNGCYCALQPPAPLQVLDVGTGSGCIAVTLAAD 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPY 174
                    DIS  AL IA+ N   +    R +    D        ++  FD+IVSNPPY
Sbjct: 138 LRNSAVTAWDISGDALLIARENV--HQWQVRVELKMEDALHPSAAAMQQQFDIIVSNPPY 195

Query: 175 IESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I       +   V  ++P  +L     D L  YR IA+   + L+ DG+   E       
Sbjct: 196 ICDKERTGMAKNVLAYEPETALFVPDDDPLRFYRAIAEYGVQALSADGVLYFETNPLYID 255

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +V ++        +   KD  G  R +   R
Sbjct: 256 NVKQMLSELGYKQIEERKDQFGKLRFIKAIR 286


>gi|15840750|ref|NP_335787.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551]
 gi|13880942|gb|AAK45601.1| N-methylase PapM [Mycobacterium tuberculosis CDC1551]
 gi|323720257|gb|EGB29356.1| hypothetical protein TMMG_01996 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 304

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 22  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 80  VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 134

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 135 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 195 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 252

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 253 LVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|330469858|ref|YP_004407601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verrucosispora maris AB-18-032]
 gi|328812829|gb|AEB47001.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verrucosispora maris AB-18-032]
          Length = 297

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 14/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++      V G+   ++ +       D Q       + R  + E +  + G   F +
Sbjct: 16  ARVEAELLAAYVLGVPRGRLAIADG--FTDEQLDRYRALVDRRARREPLQHLTGNAAFRH 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETELL    +  +      R +  ++DL +G+GA+ L++ +E P  
Sbjct: 74  LELAVGPGVFVPRPETELLAGWGIEQARRAARPRPL--VVDLCSGSGAIALSVAQEVPDA 131

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           + V V+ S  AL   + NA     +          D    D  + + G  DV++ NPPY+
Sbjct: 132 RVVAVERSSAALAWLRRNAADRAAAGDRAIEVVEADVTDPDLLAGLVGQVDVLLCNPPYV 191

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
              +   +  EV   DP  ++ GG DGL+  R + +  +  L   G   VE        V
Sbjct: 192 PQAV--AVPPEVAGHDPAEAVFGGADGLTVIRPVIERAATLLRPGGQLGVEHDDTHGAAV 249

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +         ++A +D  G  R     R
Sbjct: 250 PELLAEDGRYTAISAHRDLAGRARFATASR 279


>gi|26988557|ref|NP_743982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida KT2440]
 gi|24983329|gb|AAN67446.1|AE016372_1 modification methylase, HemK family [Pseudomonas putida KT2440]
          Length = 302

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D +L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGAVHLPWEVADSYLDCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +      P
Sbjct: 93  CGMSFIVDERVLVPRSPIGELIEKRFEPWL----ASEPARILDLCTGSGCIGIVAADVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+  R  T+Q D F  + G  FD+I+SNPPY+++  
Sbjct: 149 EAEVVLADLSFQALEVANQNIERHGLDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  E    +P + L  G DGL   R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FDDMPAEY-HHEPELGLACGSDGLDLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  +   +  GG+   +L
Sbjct: 267 PEVDFAWLEFER--GGHGVFML 286


>gi|304398259|ref|ZP_07380133.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. aB]
 gi|304354125|gb|EFM18498.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pantoea sp. aB]
          Length = 310

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D      ++ L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLWLPLDIPEDMRNARLTASERLLIVERVIRRVNERIPVAYLTNKAWFCGHEFFVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELIENRFAGLVST----PPRHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+  +   +++D F  +    +D+IV+NPPY+++  +D L  E R 
Sbjct: 166 TGALAVAEQNIEEHGLIHQVTPIRADLFRELPQLKYDLIVTNPPYVDAEDMDDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L++ G+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLAAGSDGLKLVRRILACAPDYLSEQGVLVCEVG-NSMVHMIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V    R
Sbjct: 284 --D-NGGDGVFTLTR 295


>gi|163801892|ref|ZP_02195789.1| N5-glutamine methyltransferase [Vibrio sp. AND4]
 gi|159174400|gb|EDP59204.1| N5-glutamine methyltransferase [Vibrio sp. AND4]
          Length = 310

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLAKEQYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  +G+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDNGILVCEVG-NSMVHMMEQYPQIPFTWIEFEH--GGHG-VFMLTR 295


>gi|50842730|ref|YP_055957.1| putative methylase [Propionibacterium acnes KPA171202]
 gi|289428592|ref|ZP_06430276.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J165]
 gi|295130811|ref|YP_003581474.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK137]
 gi|50840332|gb|AAT82999.1| putative methylase [Propionibacterium acnes KPA171202]
 gi|289158286|gb|EFD06505.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J165]
 gi|291377241|gb|ADE01096.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK137]
 gi|313772061|gb|EFS38027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL074PA1]
 gi|313791909|gb|EFS40010.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA1]
 gi|313801609|gb|EFS42849.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA2]
 gi|313807752|gb|EFS46239.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA2]
 gi|313810261|gb|EFS47982.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL083PA1]
 gi|313818789|gb|EFS56503.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL046PA2]
 gi|313820561|gb|EFS58275.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA1]
 gi|313822634|gb|EFS60348.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA2]
 gi|313825433|gb|EFS63147.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL063PA1]
 gi|313830591|gb|EFS68305.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL007PA1]
 gi|313833627|gb|EFS71341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL056PA1]
 gi|313838322|gb|EFS76036.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL086PA1]
 gi|314924926|gb|EFS88757.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL036PA3]
 gi|314960549|gb|EFT04651.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA2]
 gi|314962565|gb|EFT06665.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL082PA1]
 gi|314973592|gb|EFT17688.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL053PA1]
 gi|314975814|gb|EFT19909.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL045PA1]
 gi|314978720|gb|EFT22814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL072PA2]
 gi|314983707|gb|EFT27799.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA1]
 gi|314987888|gb|EFT31979.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA2]
 gi|314989699|gb|EFT33790.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA3]
 gi|315080406|gb|EFT52382.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL078PA1]
 gi|315084735|gb|EFT56711.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL027PA2]
 gi|315085419|gb|EFT57395.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA3]
 gi|315088523|gb|EFT60499.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL072PA1]
 gi|315095865|gb|EFT67841.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL038PA1]
 gi|315105833|gb|EFT77809.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL030PA1]
 gi|327326417|gb|EGE68207.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL096PA2]
 gi|327331708|gb|EGE73445.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL096PA3]
 gi|327443484|gb|EGE90138.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL013PA2]
 gi|327445687|gb|EGE92341.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL043PA2]
 gi|327448329|gb|EGE94983.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL043PA1]
 gi|327453372|gb|EGF00027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL092PA1]
 gi|328754696|gb|EGF68312.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL020PA1]
 gi|328760892|gb|EGF74457.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL099PA1]
          Length = 291

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 108/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLIRVASVNADDEDR--FNQMVDRRRSGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FDV+V+NPPY+    V
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDGRRFDVVVTNPPYLRRSDV 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|188994132|ref|YP_001928384.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277]
 gi|188593812|dbj|BAG32787.1| protoporphyrinogen oxidase [Porphyromonas gingivalis ATCC 33277]
          Length = 293

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 16/262 (6%)

Query: 8   HSFLCRVTGLSSHQVIV-DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              L   TGLS   +++ D D++L       L+  + R      +   +G   F+     
Sbjct: 29  RELLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFFGYEFA 88

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+  L    P       + +LD+GTG+G + + L +E    K   
Sbjct: 89  VNPSVLIPRPETEELVELILRKERPAA---APLCLLDVGTGSGCLAITLAREL-RAKVWA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVD 181
           +DIS  AL  A++N    G  +R    + D  S      V    D+IVSNPPYI      
Sbjct: 145 MDISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESA 201

Query: 182 CLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR-HLNKDGLCSVEIGYNQKVDVVRIF 239
            +   V   +P ++L     D L  Y+ IA+      L   G   VE+          +F
Sbjct: 202 DMAYHVLGHEPALALFAPEEDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVF 261

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
            ++     V    D  G  R L
Sbjct: 262 SAKVGWCEVRLHMDLSGKSRFL 283


>gi|293415624|ref|ZP_06658267.1| adenine-specific DNA-methyltransferase [Escherichia coli B185]
 gi|291433272|gb|EFF06251.1| adenine-specific DNA-methyltransferase [Escherichia coli B185]
          Length = 421

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|271501315|ref|YP_003334340.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Dickeya dadantii Ech586]
 gi|270344870|gb|ACZ77635.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Dickeya dadantii Ech586]
          Length = 310

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L++     
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGLEFYVDERVLVPRSPIGELINQRFVS 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP   +     ILDL TG+G + +A  +  P  +   VDIS  AL + + N   +G+  
Sbjct: 128 LLPTAPR----HILDLCTGSGCIAIACAQAFPEAEVDAVDISADALAVTEQNIQQHGMEY 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F  +    +D+IV+NPPY++   +  L  E R F+P + L  G DGL+  R
Sbjct: 184 NVTPIRSDLFRELPAIHYDLIVTNPPYVDEEDMADLPQEYR-FEPELGLAAGSDGLTLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L +DG+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RIMACAPDYLAEDGVLICEVG-NSMVHLMDQYPDIPFTWLEF--D-NGGDGVFMLTR 295


>gi|91211627|ref|YP_541613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UTI89]
 gi|117624520|ref|YP_853433.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli APEC O1]
 gi|237704811|ref|ZP_04535292.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 3_2_53FAA]
 gi|91073201|gb|ABE08082.1| protein-(glutamine-N5) methyltransferase [Escherichia coli UTI89]
 gi|115513644|gb|ABJ01719.1| protein-(glutamine-N5) methyltransferase [Escherichia coli APEC O1]
 gi|226901177|gb|EEH87436.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 3_2_53FAA]
          Length = 421

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|24113702|ref|NP_708212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 301]
 gi|30063756|ref|NP_837927.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella flexneri 2a str. 2457T]
 gi|24052771|gb|AAN43919.1| putative adenine-specific methylase [Shigella flexneri 2a str. 301]
 gi|30042011|gb|AAP17737.1| putative adenine-specific methylase [Shigella flexneri 2a str.
           2457T]
 gi|281601772|gb|ADA74756.1| putative adenine-specific methylase [Shigella flexneri 2002017]
          Length = 421

 Score =  213 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|260767691|ref|ZP_05876626.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
           102972]
 gi|260617200|gb|EEX42384.1| hypothetical adenine-specific methylase yfcB [Vibrio furnissii CIP
           102972]
 gi|315179477|gb|ADT86391.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio furnissii NCTC 11218]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVIKRIKDRTPVAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAQFE 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 127 PWLI----NEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISADALQVAEQNIQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   ++ L  E +  +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPQAPYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLV 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L  +G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 242 RRIMANAPNYLTDNGILVCEVG-NSMVHLMDQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|157962410|ref|YP_001502444.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella pealeana ATCC 700345]
 gi|157847410|gb|ABV87909.1| modification methylase, HemK family [Shewanella pealeana ATCC
           700345]
          Length = 314

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIHSN--LTSSEKHKIVELIIRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  +   +      PR     L+ +  +   P +  + V R+LDL TG+  + +A   E
Sbjct: 98  NFAGLEFYVDERVLVPRSPIAELIANRFS---PWLYNKPVNRVLDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  AL++A+ N  T  V +R   ++SD FS++     +D+IVSNPPY++
Sbjct: 155 FEDAEVDALDISVDALDVAQINIETLEVMDRVFPMESDLFSAIPKGAHYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P I L  G DGL   + I    + +L +DGL  VE+G N  V + 
Sbjct: 215 AEDIGDMPDEY-HHEPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHLS 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F       VN      G D V +  R
Sbjct: 273 EQFPDVPFTWVNFE---NGGDGVFILTR 297


>gi|41408559|ref|NP_961395.1| hypothetical protein MAP2461c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41396917|gb|AAS04778.1| HemK [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 300

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 78/272 (28%), Positives = 115/272 (42%), Gaps = 19/272 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G+   ++ +               +A+    +   +  +LG   F  
Sbjct: 32  ARWDAEQLAAHLAGVDRGRLGL--LEPPGQEFFQRYRDAVSARARRVPLQHLLGTAAFGP 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE L++ A A  LP         I+DL TG+GA+ +AL       
Sbjct: 90  VLLHVGPGVFVPRPETEALLEWATAQQLP-----PRPVIVDLCTGSGALAVALAHHCAGR 144

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ----SDWFSSVEGLFDVIVSNPP 173
               + VGVD S  ALE A+ NA    V   R D ++          ++G  D++V+NPP
Sbjct: 145 GLPARIVGVDNSDAALEYARRNAAGTTVELVRADVIELARVPGSAPDLDGRVDLVVANPP 204

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+    V  L  EV   DP  ++ GG DGL+    I +   R L   GL  +E       
Sbjct: 205 YVPDGAV--LEPEVAQHDPHHAVFGGPDGLAVIAPIVELAGRWLRPGGLIGIEHDDTTSH 262

Query: 234 DVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
             V +F+   LF  V A +D  G  R +   R
Sbjct: 263 QTVELFDRTGLFDDVRARRDLTGRPRFVTARR 294


>gi|323491461|ref|ZP_08096645.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
 gi|323314330|gb|EGA67410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio brasiliensis LMG 20546]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERMRIVERVVKRINERTPTAYLTNRAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  +G+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDNGILICEVG-NSMVHMMEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|153834410|ref|ZP_01987077.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01]
 gi|269961666|ref|ZP_06176028.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|148869181|gb|EDL68209.1| hypothetical adenine-specific methylase YfcB [Vibrio harveyi HY01]
 gi|269833707|gb|EEZ87804.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  DG+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDDGILVCEVG-NSMVHMMEQYPQIPFTWIEFEN--GGHG-VFMLTR 295


>gi|167032417|ref|YP_001667648.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida GB-1]
 gi|166858905|gb|ABY97312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas putida GB-1]
          Length = 302

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D +L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGAVHLPWEVADSYLDCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +   +  P
Sbjct: 93  CGMSFIVDERVLVPRSPIGELIEKRFEPWL----ASEPARILDLCTGSGCIGIVAAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+  R  T+Q D F  + G  FD+I+SNPPY+++  
Sbjct: 149 EAEVVLADLSFQALEVANQNIERHGLDTRVYTVQGDGFGGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  E    +P + L  G DGL   R +    + HL   GL  VE+G +Q V V  ++
Sbjct: 209 FDDMPAEY-HHEPELGLACGNDGLDLVRRMLAEAADHLTDKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  +   +  GG+   +L
Sbjct: 267 PEVDFAWLEFER--GGHGVFML 286


>gi|258422883|ref|ZP_05685783.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9635]
 gi|257846907|gb|EEV70921.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9635]
          Length = 278

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E +  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPVQYIVGFASFYGRTFE 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++++   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNTNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I + +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIEDLPHVMQKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|332673874|gb|AEE70691.1| protoporphyrinogen oxidase [Helicobacter pylori 83]
          Length = 276

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLKKERVFLHTHAYLELNHEEEARFFEWVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFCLKERIFLKKTHLWDRMP-TIQMLVSNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|256372570|ref|YP_003110394.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009154|gb|ACU54721.1| modification methylase, HemK family [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 255

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 9/226 (3%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
                R    E +  +LG   F    L +      PR ETE LV+  LA        R  
Sbjct: 29  RRLEARLAAGEPLQYVLGTWSFRGHELRVDHRALIPRYETEQLVEHVLAAV------RTG 82

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +R+LD+GTG+GA+ ++L  E P  +  G D+  +AL +A+ N    G       ++  WF
Sbjct: 83  MRVLDVGTGSGAIAISLALEGPRLEVTGSDVDPRALALARENVRATGAL--VTLVRRSWF 140

Query: 159 SSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              E    DV+V+NPPY+ +   + L   VR F+PR++L  G  GL     +  G    L
Sbjct: 141 EGAEPESLDVVVANPPYVAASEWERLDPAVRVFEPRVALVPGPSGLEGPMAVIGGARVAL 200

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              G   +EIG  Q   +V    ++    V   +D  G  RVL+  
Sbjct: 201 RPGGWLFMEIGETQGERLVAEASAQGYGDVTVERDLAGRPRVLVAR 246


>gi|322617130|gb|EFY14036.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315996572]
 gi|322617565|gb|EFY14464.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-1]
 gi|322624806|gb|EFY21635.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-3]
 gi|322630356|gb|EFY27126.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 495297-4]
 gi|322634536|gb|EFY31269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-1]
 gi|322639247|gb|EFY35939.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 515920-2]
 gi|322640110|gb|EFY36777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 531954]
 gi|322645672|gb|EFY42196.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. NC_MB110209-0054]
 gi|322652034|gb|EFY48397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. OH_2009072675]
 gi|322656207|gb|EFY52504.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. CASC_09SCPH15965]
 gi|322659359|gb|EFY55606.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 19N]
 gi|322665819|gb|EFY62002.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 81038-01]
 gi|322669943|gb|EFY66084.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MD_MDA09249507]
 gi|322673928|gb|EFY70025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 414877]
 gi|322678687|gb|EFY74743.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 366867]
 gi|322683519|gb|EFY79533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 413180]
 gi|322687594|gb|EFY83564.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 446600]
 gi|323193572|gb|EFZ78777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609458-1]
 gi|323198479|gb|EFZ83581.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556150-1]
 gi|323204591|gb|EFZ89594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 609460]
 gi|323208471|gb|EFZ93410.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 507440-20]
 gi|323213607|gb|EFZ98397.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 556152]
 gi|323218357|gb|EGA03067.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB101509-0077]
 gi|323219685|gb|EGA04166.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
 gi|323225680|gb|EGA09906.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB110209-0055]
 gi|323232351|gb|EGA16454.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB111609-0052]
 gi|323235616|gb|EGA19700.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009083312]
 gi|323241225|gb|EGA25261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 2009085258]
 gi|323244967|gb|EGA28969.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. 315731156]
 gi|323250086|gb|EGA33980.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323253870|gb|EGA37695.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323255339|gb|EGA39111.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262798|gb|EGA46349.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008284]
 gi|323264173|gb|EGA47680.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323270871|gb|EGA54309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDSEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|209695606|ref|YP_002263535.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aliivibrio salmonicida LFI1238]
 gi|208009558|emb|CAQ79852.1| putative methyltransferase [Aliivibrio salmonicida LFI1238]
          Length = 314

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +VR +        +     F  +   +      PR     L+++ 
Sbjct: 69  ESRLTTSERLRIVERVVRRINERIPTAYLTNKAWFCGLEFFVDERVLVPRSPIAELIEAQ 128

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L         RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G
Sbjct: 129 FEPWL----TETPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALMVAEQNIQDHG 184

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  + +  ++ IVSNPPY++   ++ L  E  + +P + L  G DGL 
Sbjct: 185 MEQQVFPMRSDLFRDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLK 243

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             R I      +L  +G    E+G N  V ++  +       +  
Sbjct: 244 LVRRILANAPDYLTDEGFLICEVG-NSMVHMMEQYPDIPFTWIEF 287


>gi|156975384|ref|YP_001446291.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio harveyi ATCC BAA-1116]
 gi|156526978|gb|ABU72064.1| hypothetical protein VIBHAR_03115 [Vibrio harveyi ATCC BAA-1116]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  + +  +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLSKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  DG+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDDGILVCEVG-NSMVHMMEQYPQIPFTWIEFEN--GGHG-VFMLTR 295


>gi|111225293|ref|YP_716087.1| N5-glutamine methyltransferase [Frankia alni ACN14a]
 gi|111152825|emb|CAJ64569.1| N5-glutamine methyltransferase, modifies release factors RF-1 and
           RF-2 [Frankia alni ACN14a]
          Length = 309

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/268 (27%), Positives = 113/268 (42%), Gaps = 10/268 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+        G+S  +++V  +      +R  L   + R  + E +  + G   F  
Sbjct: 33  PRADAEQLAAFALGISRARLVVVDELPPSAAER--LDELVARRARREPLQHLTGLAGFRY 90

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE +V  ALA +LP +     V + DL  G+GA+ L+L  E P  
Sbjct: 91  LDLAVGPGVFIPRPETESVVGWALA-ALPSVSGGGPVCV-DLCAGSGAIALSLAGEVPGA 148

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDW--FSSVEGLFDVIVSNPPYIES 177
           +   V++   AL   + N   +G+       D         + + G  D++VSNPPY+  
Sbjct: 149 RVHAVEVDPAALGWLRRNVAASGLPVTVHEADVTAPPIASLARLAGSVDLVVSNPPYLPD 208

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              D +  EV + DP  +L GG DGL   R +    +R L   GL +VE      V    
Sbjct: 209 ADRDEVEPEVGEHDPPRALWGGADGLDVVRAVVALAARLLRPGGLLAVEHADGHGVAAPG 268

Query: 238 IFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           +  +      V    D  G DR +   R
Sbjct: 269 LLRADGRWAEVADHPDLAGRDRFVTGRR 296


>gi|203287655|ref|YP_002222670.1| HemK family methylase [Borrelia recurrentis A1]
 gi|201084875|gb|ACH94449.1| HemK family methylase [Borrelia recurrentis A1]
          Length = 277

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 8/247 (3%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           +   +  + +  L  ++ + L + I        IH ILG ++F  ++  ++     PR +
Sbjct: 31  NKELIFANTNKNLTQQEEYKLFSQIKNIKSGIPIHYILGTKEFMGIKFYINKHVLIPRDD 90

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV+ AL     +I+K ++ +ILDL  G+G + L +       K    DIS +AL+++
Sbjct: 91  TECLVEEALI----QIKKNNLSKILDLCCGSGCIGLTIAYYLKQ-KVTLADISAQALKVS 145

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N     ++   +  +S+    +   F++I++NPPY+    +       +  +PRI+L 
Sbjct: 146 LKNTQRLNLTNHIEIKRSNLLKYIGKKFELIITNPPYLTKDELRIKEKLAK--EPRIALL 203

Query: 198 G-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           G G DGL   + I       L K+GL  +E+   QK  + +         +    D    
Sbjct: 204 GFGQDGLKIAKKIIKQAKYKLTKNGLLILEMAPWQKKSLEKFAIQEGFTYLKTIYDIENR 263

Query: 257 DRVLLFC 263
           +R LL  
Sbjct: 264 ERALLLR 270


>gi|157363844|ref|YP_001470611.1| HemK family modification methylase [Thermotoga lettingae TMO]
 gi|157314448|gb|ABV33547.1| modification methylase, HemK family [Thermotoga lettingae TMO]
          Length = 272

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 17/261 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   L +V  ++  Q+++  +  +                    +  I G   FY 
Sbjct: 21  PATEALLLLSKVGNMTKEQILLLFEDEVPYSISEKAFKLAESRASGIPLQYITGKCYFYG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L++    F PR ETE+LVD AL      I K  +  +LD+GTG+GA+ LA+   +   
Sbjct: 81  LELSVEEGVFIPRVETEVLVDIALDI----IGKNKLSTVLDIGTGSGAIALAIALNT-NC 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVI 179
           K    DIS KAL  A  NA     + + +  +  + + V+ + +   +IVSNPPYI    
Sbjct: 136 KVYASDISKKALLTAMKNAADY--AAKIEFFRGAFLTPVKHIINEIQLIVSNPPYIPVSS 193

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V   +P  +L  G DGL  YR I       L  + +  +E   +QK ++ +I 
Sbjct: 194 K--LPKDVM-HEPHEALFAGNDGLDFYRQIFSE-PDLLK-NKILIMEFSPDQKEEIQKIC 248

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
                  ++ FKD  G  R  
Sbjct: 249 --NYFGKISFFKDQFGKIRFF 267


>gi|56412718|ref|YP_149793.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. ATCC 9150]
 gi|197361652|ref|YP_002141288.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Paratyphi A
           str. AKU_12601]
 gi|56126975|gb|AAV76481.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197093128|emb|CAR58572.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYLDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|289178306|gb|ADC85552.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium animalis subsp. lactis BB-12]
          Length = 319

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/286 (25%), Positives = 106/286 (37%), Gaps = 27/286 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPD---------SVLDDRQRFFLTNAIVRSLKHE 49
              D    +  V G S   V    I+  D            D        + + R    E
Sbjct: 37  PEHDVKLIMADVLGCSPSDVESAAIMRTDVRALCAKYGRDDDAELVHTFKHMVCRRHARE 96

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I+G   F  + L +    F PR ETEL+   A+ +           RI+DL  G+G
Sbjct: 97  PLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEWVTRH--GIYSPRIVDLCAGSG 154

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LAL  E P  +  GV++S +A    + N             N   E  D       +
Sbjct: 155 ALGLALATEIPGAQVWGVELSPQAAVWTRRNITQISRTYPDITANYHLEIADATCPITLA 214

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  DV+VSNPPY+    V     EVRDFDP ++L GG  DG+     I       L 
Sbjct: 215 HLDGTVDVVVSNPPYVPQSQVPQ-QPEVRDFDPSLALYGGSSDGMLIPEQIIRRAYALLR 273

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             GL  +E   +Q    V    +          D     R L+  +
Sbjct: 274 PGGLFLMEHDISQPDRTVAFARASGFSDARTGADLTYRPRYLVATK 319


>gi|317178623|dbj|BAJ56411.1| protoporphyrinogen oxidase [Helicobacter pylori F30]
          Length = 276

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLKKERVFLHTHTYLELNHEEEVHFFEWVEKRLNDYPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|215487543|ref|YP_002329974.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|215265615|emb|CAS10018.1| N5-glutamine methyltransferase [Escherichia coli O127:H6 str.
           E2348/69]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLVSGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|260598751|ref|YP_003211322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter turicensis z3032]
 gi|260217928|emb|CBA32526.1| Uncharacterized adenine-specific methylase yfcB [Cronobacter
           turicensis z3032]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +      +   ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLIDH----EPQHILDMCTGSGCIAIACAYAFPNAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDIIVTNPPYVDEEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  +G+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLAAGSDGLKLARRILACSPDYLTDNGILICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|328947854|ref|YP_004365191.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema succinifaciens DSM 2489]
 gi|328448178|gb|AEB13894.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema succinifaciens DSM 2489]
          Length = 310

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 73/285 (25%), Positives = 123/285 (43%), Gaps = 30/285 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            + D+   L  +       ++   ++ L + Q+    ++I +      +  I G ++F+ 
Sbjct: 20  PILDADVILKWILKCDQTFILFHSETELSELQKNIFCSSIEKRKTGLPVAYITGIKEFFG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL---DLGTGTGAVCLALLKES 119
               +  +   P+P+TELLV++A+ F   +       +IL   D+ +G+G V +++LK  
Sbjct: 80  SDFEVDKNVLIPKPDTELLVENAVNFIEEKFHASSDCKILSVCDMCSGSGCVGISILKFI 139

Query: 120 PF---------FKGVGVDISCKALEIAKSNAVTNGVSERFD---TLQSDWFSSV----EG 163
                       K +  DIS K L+IAK N++       F+    +QS+ F ++     G
Sbjct: 140 EEKKIIPKSLLPKIIFADISKKTLDIAKKNSLRLLSEFAFEKTVFVQSNLFENLGQSRNG 199

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG----------IDGLSHYRTIADGV 213
           LFDVIVSNPPYI       L  + R  +P ++L G            DGL   R +    
Sbjct: 200 LFDVIVSNPPYIPYSQTVELLKDGRS-EPSLALCGDIDLNGNLTNFDDGLEIIRNLIFQS 258

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              LN  G+  +E G        +I E  +   V  +KD  G  R
Sbjct: 259 VDFLNPGGILILETGEYNAFQTKKIMEDSEFKDVKIYKDLEGQFR 303


>gi|170727358|ref|YP_001761384.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella woodyi ATCC 51908]
 gi|169812705|gb|ACA87289.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shewanella woodyi ATCC 51908]
          Length = 314

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIHSN--LTSSEKHKIVELILRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  ++  +      PR     ++ +  +   P +  + V R+LDL TG+  + +A   E
Sbjct: 98  MFAGLQFYVDERVLVPRSPIAEMIANRFS---PWLYNKPVNRVLDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  ALE+A+ N  T GV +R   ++S+ FS++     +D+IVSNPPY++
Sbjct: 155 FDEAEVDALDISEDALEVAQINIETLGVMDRVFPIESNLFSAIPKGPHYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +D +  E    +P I L  G DGL   + I    + +L +DGL  VE+G N  V + 
Sbjct: 215 AEDIDDMPEEY-HHEPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHLA 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F       V+      G D V +  R
Sbjct: 273 EQFPDVPFTWVSFEH---GGDGVFVLTR 297


>gi|110003949|emb|CAK98289.1| putative s-adenosyl-methionine-dependent methyltransferase protein
           [Spiroplasma citri]
          Length = 291

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 21/273 (7%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D    +      S  ++    +  ++ +   +    I      + I  I   ++FY  
Sbjct: 23  LADIKILIAFFMKTSLAKLYAIQNDKINFKIDDYWQQLIAYR-NGKPIQHITNLQNFYGY 81

Query: 64  RLTLSSDTFEPRPETELLVD-------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              +  +   PR ETE LVD            +  +      + ++D+GTG+GA+ ++L 
Sbjct: 82  DFYVDYNVLIPRYETEELVDNINIIIDEMFLNNCNKRNCNKRLTLIDIGTGSGAIAISLG 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPP 173
            E+P       DIS +AL++AK N            L+ D        +   D++V NPP
Sbjct: 142 LENPNLTIYASDISIEALKVAKRNIKQLNCK-NVKLLEGDMLEPFIKNKIKADLLVCNPP 200

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI +     +   V++++P ++L G  DGL  YR I     + + K+G+   E GY+QK 
Sbjct: 201 YIPNNQK--ISHHVKNYEPHVALFGDADGLYFYREIFQNWQKVVKKNGILCFEHGYDQKK 258

Query: 234 D----VVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           D    V   F + K +     KD     R+L  
Sbjct: 259 DLEKLVKEYFPNHKYY---FQKDINKKWRMLFI 288


>gi|332025875|gb|EGI66031.1| HemK methyltransferase family member 1 [Acromyrmex echinatior]
          Length = 353

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 23/255 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +  L+  Q   L +     L    +  I+G  DF ++ + L    F PRPETE+LVD  L
Sbjct: 95  NDTLNASQIEKLESLCECRLSRMPVQYIIGEWDFRDITVKLVPPIFIPRPETEILVDFVL 154

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                   + D   IL++G G+GA+ LAL       K   +D +  A ++   N     +
Sbjct: 155 KRL--NSSQADSCEILEIGCGSGAISLALAHACKKIKCTAIDENLHACDLTMINRSKLDL 212

Query: 147 SERFDTLQSDWFSS------------------VEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           SE+   + +   S                      LFD ++SNPPY+ +  +  L  E+R
Sbjct: 213 SEQVIVIHATLKSDASIETLSNLYDAGDSKSLNSKLFDYVISNPPYVPTKKISELQPEIR 272

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV---RIFESRKLF 245
            ++   +LDGG DGL   + +    ++ L   G   +E+       +      +   KL 
Sbjct: 273 IYEDLRALDGGDDGLKVIKPLLKYAAKGLKPGGRLFIEVDPTHPEYIQFFTNKYPELKLH 332

Query: 246 LVNAFKDYGGNDRVL 260
             + +KD+  NDR +
Sbjct: 333 YKHTYKDFCNNDRFV 347


>gi|311278709|ref|YP_003940940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cloacae SCF1]
 gi|308747904|gb|ADO47656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cloacae SCF1]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/255 (24%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRLARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L++S  A  +          ILD+ TG+G + +A     P  +  GVDIS
Sbjct: 110 VLVPRSPIGELINSRFAGLI----HHQPQHILDMCTGSGCIAIACAYAFPEAEVDGVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAERNIEEHGLIHNVTPIRSDLFRDLPQVQYDLIVTNPPYVDAEDMADLPGEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILACAPDYLSDDGILICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|71280281|ref|YP_269848.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Colwellia psychrerythraea 34H]
 gi|71146021|gb|AAZ26494.1| modification methylase, HemK family [Colwellia psychrerythraea 34H]
          Length = 314

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 12/259 (4%)

Query: 2   QALRDSHSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
            AL ++ + +     L    S  V+     ++D  ++  L     R    + +  I    
Sbjct: 40  NALNEALTLVMFALSLPEEMSEDVMTC--RLVDYEKQNILALFEQRIETQQPVAYITNLA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   +      PR     L++          E+    RILDL TG+G + +A    
Sbjct: 98  YFAQLPFYVDERVLVPRSPIGELIEKHFDPYFS--EQNPPQRILDLCTGSGCIAIACASY 155

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P  +   VD+S  AL +A+ N   +G+SE+   +QSD FS V    +D+IV+NPPY++ 
Sbjct: 156 FPDAEVDAVDLSLDALNVAEINIENHGLSEQVIPIQSDVFSGVTAQKYDLIVTNPPYVDQ 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +D L  E    +P + L  G DGL   R I    + +LN DG+   E+G +Q   V  
Sbjct: 216 EDIDSLPAEF-THEPEMGLGCGEDGLDIVRIILAESALYLNDDGVLICEVGNSQ-YHVEA 273

Query: 238 IFESRKLFLVNAFKDYGGN 256
           ++       +   +  GG+
Sbjct: 274 LYPEVDFTWLTFER--GGH 290


>gi|312884896|ref|ZP_07744586.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367373|gb|EFP94935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+++ 
Sbjct: 65  NSRLTTSERMRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIEAQ 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      + +RI+D+ TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPIRIMDMCTGSGCIAIACAHAFPEAEVDAIDISADALDVAEENIQDHG 180

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLTVEKYNLIVSNPPYVDQEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L   GL   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDKGLLICEVG-NSMVHMIEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|315503944|ref|YP_004082831.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Micromonospora sp. L5]
 gi|315410563|gb|ADU08680.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora sp. L5]
          Length = 296

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 106/273 (38%), Gaps = 17/273 (6%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A R ++      V  +   ++ +         QR  L   + R +  E +  +LG   
Sbjct: 14  VEAPRAEAEQLAAYVLDVPRGRLALADG--FTPAQRDRLDALVGRRVTREPLQHLLGSAG 71

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETELL    +  +           ++DL +G+GA+ LA+ +E 
Sbjct: 72  FRHLELAVGPGVFVPRPETELLAGWGIERAREHA----APLVVDLCSGSGAIALAVAQEV 127

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNP 172
           P  + V V+ S  AL   + N      +          D    D  + + G  DV++ NP
Sbjct: 128 PAARVVAVERSPAALAWLRRNVAGRAAAGDRPVEVVAADVTDPDLLADLAGRVDVLLCNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+   +   +  EV   DP  ++ GG DGL   R +    +  L   G   +E      
Sbjct: 188 PYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVIRPVVGRAAALLRPGGAIGIEHDDTHA 245

Query: 233 VDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             V  +         V   +D  G  R     R
Sbjct: 246 AAVPALLRGDGRYDRVEEHRDLAGRPRWASASR 278


>gi|254228465|ref|ZP_04921891.1| methyltransferase, HemK family [Vibrio sp. Ex25]
 gi|269965657|ref|ZP_06179770.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|151939053|gb|EDN57885.1| methyltransferase, HemK family [Vibrio sp. Ex25]
 gi|269829725|gb|EEZ83961.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 292

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 47  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 106

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 107 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 162

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 163 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 221

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  +G+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 222 LVRRILANAPDYLTDNGILICEVG-NSMIHMMEQYPEIPFTWIEFEN--GGHG-VFMLTR 277


>gi|326795497|ref|YP_004313317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Marinomonas mediterranea MMB-1]
 gi|326546261|gb|ADZ91481.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Marinomonas mediterranea MMB-1]
          Length = 300

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 114/261 (43%), Gaps = 16/261 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSV---LDDRQRFFLTNAI-VRSLKHESIHRILGWRDFY 61
           ++   +     L    +  D D +   L   +R  +   +  R  K E +  +LG   F 
Sbjct: 42  EAVHLVMGALRLP---LDFDKDMLDSRLTIDERKRIVKLVHSRISKREPLPYLLGKAWFM 98

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ DT  PR     L+++     LP       + +LD+ TG+G + +A       
Sbjct: 99  GLDFKVTKDTLIPRSPIMTLIENEFQPWLPHY----PMNVLDMCTGSGCIGIATALAFED 154

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +    DIS  AL++A+ N     + +R   ++SD F  + G  +D+IV NPPY+++   
Sbjct: 155 AEVDLSDISSAALDVARYNVSDYDLDDRVSVIESDMFDGLAGNKYDLIVCNPPYVDAQDY 214

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                E  + +P+++L  G DGL   R      + +L+  G+   E+G N +V +   + 
Sbjct: 215 SSAPAEFHN-EPQLALTSGDDGLDFTRRFLSQAANYLHDSGIVVYEVG-NSEVALQAAYP 272

Query: 241 SRKLFLVNAFKDYGGNDRVLL 261
             +   V   +  GGN   +L
Sbjct: 273 DTEFMWVELEQ--GGNGVFVL 291


>gi|260899980|ref|ZP_05908375.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AQ4037]
 gi|308107260|gb|EFO44800.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AQ4037]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  DG+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDDGILICEVG-NSMIHMMDQYPQIPFTWIEFEN--GGHG-VFMLTR 295


>gi|68052371|sp|Q921L7|HEMK1_MOUSE RecName: Full=HemK methyltransferase family member 1
 gi|15030311|gb|AAH11431.1| HemK methyltransferase family member 1 [Mus musculus]
 gi|19354454|gb|AAH24428.1| HemK methyltransferase family member 1 [Mus musculus]
 gi|148689235|gb|EDL21182.1| HemK methyltransferase family member 1, isoform CRA_a [Mus
           musculus]
          Length = 340

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/279 (26%), Positives = 117/279 (41%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L  +Q   +       L+   +  ILG  
Sbjct: 60  EARESSEYIVAHVLG-AKTFQSLKPALWTKPLTPQQLECIQELCGHRLQRMPVQYILGEW 118

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L +    F PRPETE LV+  L     R   +  +D   IL++G G+GA+ L+L
Sbjct: 119 DFQGLSLKMVPPVFIPRPETEELVEWVLEEVARRPHAVRAQDGPLILEVGCGSGAITLSL 178

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVI 168
           L + P  + V VD    A+ +   NA    + +R   +  D  S             D++
Sbjct: 179 LSQLPKSRVVAVDKEEAAVSLTHENARRLQLQDRIRIICLDITSEGCCTHLLPWSPLDLV 238

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+  ++  ++LDGG +G+     I     + LN  G   +E+ 
Sbjct: 239 VSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLAPQLLNASGSIFLEVD 298

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +S     L LV   +D+ G  R L   +
Sbjct: 299 PRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFLHVQK 337


>gi|254796528|ref|YP_003081364.1| modification methylase, HemK family [Neorickettsia risticii str.
           Illinois]
 gi|254589765|gb|ACT69127.1| modification methylase, HemK family [Neorickettsia risticii str.
           Illinois]
          Length = 289

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 12/263 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  V  L+  Q+I+  +  +   Q       +     H S+  I+G ++F+   
Sbjct: 35  LDAELLLAHVLSLNREQLILYCNEGMTKSQATDFAMLLELRKSH-SVAAIVGEKEFWKYS 93

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFK 123
             ++ D   PRP+T    ++ L   L R +K    ++I++LGTG+G V +++LKE     
Sbjct: 94  FAVNKDVLIPRPDT----ETMLIALLSRYKKLTQPLKIVELGTGSGCVIISILKEFRNAL 149

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIV 180
           G G + S  A  +   N +  G+  R    + D+ S+   +    DVIVSNPPYI    +
Sbjct: 150 GFGFEKSKAAFYLTMRNMLKYGLRARLKLYRLDFDSAMRVLSCKVDVIVSNPPYIRRGEI 209

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  EV++ +PRI+LDGG +G+  Y +I    S+ L   G   +EIG + +  +V    
Sbjct: 210 PYLQQEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGNSWRDSIVS--A 266

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +    ++  ++D  G +R+L+  
Sbjct: 267 NCPFKIIERYRDLSGTERILVLR 289


>gi|91223592|ref|ZP_01258857.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01]
 gi|262393635|ref|YP_003285489.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25]
 gi|91191678|gb|EAS77942.1| putative adenine-specific methylase [Vibrio alginolyticus 12G01]
 gi|262337229|gb|ACY51024.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. Ex25]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  +G+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDNGILICEVG-NSMIHMMEQYPEIPFTWIEFEN--GGHG-VFMLTR 295


>gi|71736054|ref|YP_274042.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556607|gb|AAZ35818.1| modification methylase, HemK family [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320323461|gb|EFW79546.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320329496|gb|EFW85488.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330879875|gb|EGH14024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 302

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 10/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R +        +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISELQRLIKRRIDDRVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +   ILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ANEPALILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HLN+ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLNEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                  ++  +  GG+   +L
Sbjct: 267 PEVDFAWLDFQR--GGHGVFML 286


>gi|34540018|ref|NP_904497.1| HemK family modification methylase [Porphyromonas gingivalis W83]
 gi|34396329|gb|AAQ65396.1| modification methylase, HemK family [Porphyromonas gingivalis W83]
          Length = 293

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 106/260 (40%), Gaps = 16/260 (6%)

Query: 10  FLCRVTGLSSHQVIV-DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            L   TGLS   +++ D D++L       L+  + R      +   +G   F+     ++
Sbjct: 31  LLTEATGLSRSALLLADKDTLLSTEASQALSRYLDRMKTGIPLQYAVGHAPFFGYEFAVN 90

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                PRPETE LV+  L    P       + +LD+GTG+G + + L +E    K   +D
Sbjct: 91  PSVLIPRPETEELVELILRKERPAAAS---LCLLDVGTGSGCLAITLAREL-RAKVWAMD 146

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVDCL 183
           IS  AL  A++N    G  +R    + D  S      V    D+IVSNPPYI       +
Sbjct: 147 ISPDALATARTNV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESADM 203

Query: 184 GLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR-HLNKDGLCSVEIGYNQKVDVVRIFES 241
              V   +P ++L     D L  Y+ IA+      L   G   VE+          +F +
Sbjct: 204 AYHVLGHEPALALFAPEEDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVFSA 263

Query: 242 R-KLFLVNAFKDYGGNDRVL 260
           +     V    D  G  R L
Sbjct: 264 KVGWCEVRLHTDLSGKSRFL 283


>gi|28898977|ref|NP_798582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836932|ref|ZP_01989599.1| hypothetical adenine-specific methylase YfcB [Vibrio
           parahaemolyticus AQ3810]
 gi|260365277|ref|ZP_05777834.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus K5030]
 gi|260878827|ref|ZP_05891182.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AN-5034]
 gi|260896251|ref|ZP_05904747.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus Peru-466]
 gi|28807196|dbj|BAC60466.1| putative adenine-specific methylase [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149749705|gb|EDM60450.1| hypothetical adenine-specific methylase YfcB [Vibrio
           parahaemolyticus AQ3810]
 gi|308088797|gb|EFO38492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus Peru-466]
 gi|308094294|gb|EFO43989.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus AN-5034]
 gi|308115430|gb|EFO52970.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus K5030]
 gi|328474485|gb|EGF45290.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio parahaemolyticus 10329]
          Length = 310

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPEAEVDAIDISADALQVAEQNIQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPQEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  DG+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDDGILICEVG-NSMIHMMDQYPQIPFTWIEFEN--GGHG-VFMLTR 295


>gi|73985650|ref|XP_533816.2| PREDICTED: similar to HemK methyltransferase family member 1
           (M.HsaHemKP) [Canis familiaris]
          Length = 358

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 77/279 (27%), Positives = 123/279 (44%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P+     L   Q   +     R L+   +  ILG  
Sbjct: 59  EAQASSEYIVAHVLG-AKTFQSLRPELWTQPLTPWQLQCIQELSSRRLQRMPVQYILGEW 117

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L   A S   +  +D   IL++G G+GA+ L+L
Sbjct: 118 DFQGLSLKMAPPVFIPRPETEELVEWVLEEVAQSPCAMGTQDGPLILEVGCGSGAISLSL 177

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSV-EGLFDVI 168
           L + P  + + VD    A+ + + NA    + +R         L+  W   +  G  D++
Sbjct: 178 LSQLPQSRVIAVDKGEAAICLTEENAQRLRLLDRIRIVPLDVTLEGSWAHLLPWGPVDLV 237

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPYI    ++ L  E+R ++  ++LDGG +G+     I       L   G   +E+ 
Sbjct: 238 VSNPPYIFHQDMEQLAPEIRSYEDPLALDGGEEGMDIIIHILALARWLLKDSGSIFLEVD 297

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +S+    L LV   +D+ G  R L   R
Sbjct: 298 PRHPELVGNWLQSQPDLSLDLVAMRRDFCGRPRFLHIQR 336


>gi|82777741|ref|YP_404089.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella dysenteriae Sd197]
 gi|81241889|gb|ABB62599.1| putative adenine-specific methylase [Shigella dysenteriae Sd197]
          Length = 421

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|307245855|ref|ZP_07527940.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254828|ref|ZP_07536654.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259270|ref|ZP_07540999.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853215|gb|EFM85435.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862199|gb|EFM94167.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866637|gb|EFM98496.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 314

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 16/260 (6%)

Query: 12  CRVTGLSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
                LS+  + +D P+++    L   ++  +   +++ L   + I  +     F     
Sbjct: 53  SHQLVLSALNLPIDVPEAMYSSNLTRIEKERIIEMVIQRLGMRKPIAYLTNSAWFCGAEY 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  +  
Sbjct: 113 YVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEVD 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +D + 
Sbjct: 169 AVDLSLDALDVAQINIERHQVAHRVFPISSDLFTVIPQDKYDLIVTNPPYVDQEDLDDMP 228

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S   
Sbjct: 229 QEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLIEQFPSVPF 286

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V       G   V    R
Sbjct: 287 HWVELK---NGGLGVFTLTR 303


>gi|303252986|ref|ZP_07339141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|307247931|ref|ZP_07529965.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|302648177|gb|EFL78378.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
 gi|306855581|gb|EFM87750.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
          Length = 314

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 7/216 (3%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
            +   +   I R    + +  +     F      +      PR     L+       L  
Sbjct: 80  EKERIIEMVIQRLGMRKPVAYLTNSAWFCGAEYYVDERVIVPRSPIGELIQQGFTGIL-- 137

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
             + +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ R   
Sbjct: 138 --RAEPKRILDMCTGSGCIAIACAERFPHAEVDAVDLSLDALDVAQINIERHQVAHRVFP 195

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + SD F+ +    +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   + I  
Sbjct: 196 ISSDLFTDIPQDKYDLIVTNPPYVDQEDLDDMPQEF-HHEPELALGSGVDGLDITKRILA 254

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
               +L  +G+   E+G N  V ++  F S     V
Sbjct: 255 EAPNYLADNGVLVCEVG-NSMVHLMEQFPSVPFHWV 289


>gi|189218442|ref|YP_001939083.1| methylase of polypeptide chain release factors [Methylacidiphilum
           infernorum V4]
 gi|189185300|gb|ACD82485.1| Methylase of polypeptide chain release factors [Methylacidiphilum
           infernorum V4]
          Length = 279

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 13/257 (5%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
                    +    + + P  +++      L   I R    E +  ILG+  FY  ++ +
Sbjct: 28  ELIFSATLNVDRLSLYILPSLLIEAEVADLLWKRIERRATGEPLDYILGFSPFYGGKILV 87

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S     PRPETE +V++A+   L RI       ILD+GTG+GA+ + L K  P     G 
Sbjct: 88  SPAVLIPRPETEYVVEAAI-NLLSRIPGP----ILDVGTGSGAIVVTLAKLFPDRSFYGS 142

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLE 186
           DIS +ALE+A+ N             + D  +      F++IV+N PYI S  +  L  E
Sbjct: 143 DISEEALEVARKNGKDLA---NLYFYKDDLLNDPPLDFFELIVANLPYIPSETLPRLSAE 199

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +  F+P I+LDGG +GL   +               C +EIG  Q   V +    +   +
Sbjct: 200 I-QFEPAIALDGGKEGLELIKKFIGQAKNRCR---YCILEIGDGQFSKVSQFLHEQGFSI 255

Query: 247 VNAFKDYGGNDRVLLFC 263
           +   KD    +RV++  
Sbjct: 256 IEVKKDLSQMERVIVGR 272


>gi|260913869|ref|ZP_05920343.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC
           43325]
 gi|260631956|gb|EEX50133.1| protein-(glutamine-N5) methyltransferase [Pasteurella dagmatis ATCC
           43325]
          Length = 313

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LS+  + +D  + L         +   + + I R  K   +  +     F  +   +   
Sbjct: 57  LSTLDLPLDFPNELYSARLTRSEKEVLIRSVIQRIEKRIPVAYLTNQSWFCGLPFYIDER 116

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+  + +  L         RILD+ TG+G + +A   + P  +   VD+S
Sbjct: 117 VIVPRSPINALIQDSFSDLLS----EPPKRILDMCTGSGCIAIACAVQFPDAEVDAVDLS 172

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
             ALE+A+ N   + +  R   +QSD F+ +  + +D+IVSNPPY++   +  +  E   
Sbjct: 173 PDALEVAEINIERHQLLHRVFPMQSDLFNDLAKVEYDLIVSNPPYVDEEDLADMPEEF-H 231

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           ++P ++L  G+DGL   + I      +L++ G+   E+G N  V ++  +       V 
Sbjct: 232 YEPEMALGSGVDGLEITKRILYAAPDYLSEKGVLVCEVG-NSMVHLIEQYPDVPFNWVE 289


>gi|237808925|ref|YP_002893365.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
 gi|237501186|gb|ACQ93779.1| modification methylase, HemK family [Tolumonas auensis DSM 9187]
          Length = 311

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 12/238 (5%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  L   I + + +      +     F  +   +      PR     L+      
Sbjct: 68  LTRTERSHLAGLIQQRIEQRVPAPYLTNKAWFAGMEFYVDERVLIPRSPIAELIHKRFTP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L      +  RI+DL TG+G + +A+    P  +   +D+S  AL + + N   +G+  
Sbjct: 128 WLQH----EPTRIMDLCTGSGCIAIAMAHTFPAAEVDALDLSEDALAVCEMNIEMHGMLG 183

Query: 149 RFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   + SD F ++     +D+IVSNPPY++   +  L  E    +P ++L  G DGL   
Sbjct: 184 QVIPICSDLFDALPAGDKYDLIVSNPPYVDVEDMSDLPEEF-HHEPEMALAAGDDGLDLV 242

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I       L ++G+  VE+G N  V +  +F   +   +   +   G D V +  +
Sbjct: 243 RRILAEAGELLKENGVLVVEVG-NSMVHLAALFPEVEFEWIKFEQ---GGDGVFVLTK 296


>gi|289425387|ref|ZP_06427164.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK187]
 gi|289154365|gb|EFD03053.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes SK187]
          Length = 291

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I    + ++          + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLI--RVASVNAADEDRFNQMVDRRRSGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FDV+V+NPPY+    V
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDGRRFDVVVTNPPYLRRSDV 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|312962187|ref|ZP_07776679.1| modification methylase, HemK family [Pseudomonas fluorescens WH6]
 gi|311283524|gb|EFQ62113.1| modification methylase, HemK family [Pseudomonas fluorescens WH6]
          Length = 338

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L++ +   +   + R +        +LG   F
Sbjct: 69  NAWDEARQLVLGAVHLPWEIADSYLDCNLEEEEISHVQRLLHRRIHERVPTAYLLGEAWF 128

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+++     L +       RILDL TG+G + +A   E  
Sbjct: 129 CGMSFIVDKRVLIPRSPIGELIENRFEPWLAQ----PPARILDLCTGSGCIGIACAYEFQ 184

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G  ER  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 185 DAEVVLGDLSFEALEVANQNIERHGADERVYTVQGDGFGGLPGQRFDLIVSNPPYVDAED 244

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 245 FADMPDEY-QHEPELGLACGDDGLNLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 302

Query: 240 ESRKLFLVNAFKDYGGN 256
                  +   +  GG+
Sbjct: 303 PEVDFAWLEFQR--GGH 317


>gi|225017548|ref|ZP_03706740.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum
           DSM 5476]
 gi|224949698|gb|EEG30907.1| hypothetical protein CLOSTMETH_01475 [Clostridium methylpentosum
           DSM 5476]
          Length = 287

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            ++   L  V       +++     L   Q  +  +   R  +   +  +LG  +FY + 
Sbjct: 24  LETSLLLQHVLACDRQWLLLHRQEQLTAEQEGWARSLARRRAEGIPLQYLLGSWEFYGLE 83

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PRP+TE L D A+     R        + DL  G+G V  A+       + 
Sbjct: 84  FEVGEGVLIPRPDTERLCDIAIEQIGER-----PAVVADLCAGSGCVAAAVQCACAQAQM 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
             V++S  AL   + N   N  + +   ++ D  S     +    D I+SNPPY+ +  +
Sbjct: 139 FAVELSELALPYLRRNLARN--APQVTVIEGDVLSGDTPGLLPQLDAILSNPPYLTAEDM 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  EVR  +P ++L G  DGL  YR I       L   GL + EIG NQ   V +I  
Sbjct: 197 EHLQREVR-HEPALALYGEEDGLGFYRGITQLWKHRLRPGGLLAYEIGINQHTAVAKILR 255

Query: 241 SRKLFLVNAFKDYGGNDRVL 260
                 +   +D  G  RV+
Sbjct: 256 ENGFSRIQYAEDLHGVIRVV 275


>gi|308184812|ref|YP_003928945.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori SJM180]
 gi|308060732|gb|ADO02628.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori SJM180]
          Length = 276

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEHLELNHEEEVRFFKLVGKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  + ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDV----ISQYHLKEVGEIGIGSGCVSVSLALENPNLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KAL++A  N     + ER    Q+  +  +  + +++VSNPPYI       L 
Sbjct: 139 YASDISPKALKVALKNIERFNLKERVFLKQTHLWDHMP-MIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHKALFGGVKGDEILKEIVFLAAGLKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|254458489|ref|ZP_05071914.1| modification methylase HemK [Campylobacterales bacterium GD 1]
 gi|207084797|gb|EDZ62084.1| modification methylase HemK [Campylobacterales bacterium GD 1]
          Length = 276

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R++   L          +I +  + + +  R  L   + R  K+E +  I     FY
Sbjct: 24  RASREAQLLLMMHLQKDELWLITNQSAEVSNVDR--LYEWVERRAKNEPLEYITNSVSFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    ++     PRPETELL+D  L        K   +  +++G G+G + + L +    
Sbjct: 82  SQEFFIAPGALIPRPETELLIDDVLKNFPDTDAK---MTFIEVGIGSGIISIVLAQHYKN 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K + VDIS  AL IAK+N     +  R +         V+   D +VSNPPYI + I  
Sbjct: 139 AKFIAVDISPAALIIAKANIEKFEMQNRIELRLGSLLEPVDEHIDYLVSNPPYIANEI-- 196

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGV-SRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            L      ++P+ +L GG  G    + + D V  R++N     + EIGY+QK  +    +
Sbjct: 197 -LLESNLSYEPQNALFGGNIGDEIIQNLLDEVLKRNIN---FFTCEIGYDQKDRIRDYLK 252

Query: 241 SRKLFLVNAFKDYGGNDR 258
           +     +  +KDY   DR
Sbjct: 253 NTDFDSLEFYKDYSDFDR 270


>gi|126174960|ref|YP_001051109.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella baltica OS155]
 gi|125998165|gb|ABN62240.1| modification methylase, HemK family [Shewanella baltica OS155]
          Length = 314

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 17/269 (6%)

Query: 2   QALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGW 57
            A  ++ + +     L      QVI+   S L   ++  +   I+R ++    +  +   
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIL---SNLTSSEKHKIVELIIRRVRERLPVPYLTNK 96

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   +      PR     ++ +  +   P +  + V RILDL TG+  + +A   
Sbjct: 97  ARFAGLEFYVDERVLVPRSPIAEMIANRFS---PWLYGKPVTRILDLCTGSACIAIACAY 153

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E    +   +DIS  AL++A+ N  T GV +R   +QSD FS++     +D+IVSNPPY+
Sbjct: 154 EFEDAEVDALDISEDALDVAQINIETLGVMDRVFPMQSDLFSAIPEGPQYDLIVSNPPYV 213

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  +  E    +P I L  G DGL   + I    +++L   GL  VE+G N  V +
Sbjct: 214 DAEDIGDMPDEY-HHEPAIGLASGRDGLDLTKRILANTAQYLTPTGLLVVEVG-NSMVHL 271

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  F       +N      G D V +  R
Sbjct: 272 IEQFPEVPFTWINFE---NGGDGVFVLTR 297


>gi|269957242|ref|YP_003327031.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305923|gb|ACZ31473.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 282

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 12/269 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+   L  V G+S   +  ++  D  L D         + R  + E +  + G   F
Sbjct: 12  PRVDAEVLLGFVLGVSRGALGSLLVLDRELPDGAAAAFDALVERRARREPLQHLTGVAPF 71

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V L +    F PRPETE +   A+  +   +++R    ++DL TG+GA+ LA+  E P
Sbjct: 72  RHVELAVGPGVFVPRPETEQVAQVAIDEARRVVDERGSAVVVDLCTGSGAIALAVATEVP 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIES 177
             +   V++   A   A  N   +G       ++ D       ++G  DV+VSNPPY+  
Sbjct: 132 GARVHAVELDAAAHAWAARNLAGSG----VTLVKGDARTTLRELDGAVDVVVSNPPYVPP 187

Query: 178 VIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             V     EV + DP ++L G G DGL   R I    +R L   GL  +E    Q     
Sbjct: 188 DAVPR-DPEVAEHDPAVALYGLGADGLEVPRGITAAAARLLRPGGLYVMEHAEVQDAAAR 246

Query: 237 RIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
            + ++  L+       D  G  R+++  R
Sbjct: 247 AMVDATGLYAPATTADDLTGRPRMVVARR 275


>gi|187731589|ref|YP_001881152.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|194432949|ref|ZP_03065233.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella dysenteriae 1012]
 gi|312967630|ref|ZP_07781845.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 2362-75]
 gi|187428581|gb|ACD07855.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella boydii CDC 3083-94]
 gi|194418937|gb|EDX35022.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Shigella dysenteriae 1012]
 gi|312287827|gb|EFR15732.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 2362-75]
 gi|320174687|gb|EFW49820.1| Ribosomal protein L3 methyltransferase [Shigella dysenteriae CDC
           74-1112]
 gi|320183787|gb|EFW58621.1| Ribosomal protein L3 methyltransferase [Shigella flexneri CDC
           796-83]
 gi|323187945|gb|EFZ73240.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli RN587/1]
 gi|332090094|gb|EGI95193.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 155-74]
 gi|332093472|gb|EGI98530.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella boydii 3594-74]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|89109150|ref|AP_002930.1| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111419|ref|NP_416833.4| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157161819|ref|YP_001459137.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli HS]
 gi|170081946|ref|YP_001731266.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188493483|ref|ZP_03000753.1| methyltransferase, HemK family [Escherichia coli 53638]
 gi|238901505|ref|YP_002927301.1| N5-glutamine methyltransferase [Escherichia coli BW2952]
 gi|256021985|ref|ZP_05435850.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|300948520|ref|ZP_07162614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 116-1]
 gi|300956401|ref|ZP_07168692.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 175-1]
 gi|301023578|ref|ZP_07187342.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 196-1]
 gi|307138995|ref|ZP_07498351.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|331642972|ref|ZP_08344107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H736]
 gi|331658505|ref|ZP_08359449.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA206]
 gi|19859177|sp|P39199|YFCB_ECOLI RecName: Full=Uncharacterized adenine-specific methylase yfcB
 gi|85675359|dbj|BAA16188.2| N5-glutamine methyltransferase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082085|gb|AAC75390.2| N5-glutamine methyltransferase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|157067499|gb|ABV06754.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli HS]
 gi|169889781|gb|ACB03488.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|188488682|gb|EDU63785.1| methyltransferase, HemK family [Escherichia coli 53638]
 gi|238861843|gb|ACR63841.1| N5-glutamine methyltransferase [Escherichia coli BW2952]
 gi|260448576|gb|ACX38998.1| modification methylase, HemK family [Escherichia coli DH1]
 gi|299880813|gb|EFI89024.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 196-1]
 gi|300316750|gb|EFJ66534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 175-1]
 gi|300451930|gb|EFK15550.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 116-1]
 gi|309702641|emb|CBJ01970.1| putative methylase [Escherichia coli ETEC H10407]
 gi|315136965|dbj|BAJ44124.1| adenine-specific DNA-methyltransferase [Escherichia coli DH1]
 gi|315298134|gb|EFU57398.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 16-3]
 gi|315615599|gb|EFU96231.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 3431]
 gi|331039770|gb|EGI11990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H736]
 gi|331054170|gb|EGI26197.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA206]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|293410687|ref|ZP_06654263.1| hypothetical protein ECEG_01659 [Escherichia coli B354]
 gi|291471155|gb|EFF13639.1| hypothetical protein ECEG_01659 [Escherichia coli B354]
          Length = 314

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 54  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 113

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 114 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 169

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 170 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 228

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 229 HEPELGLASGSDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 287

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 288 --D-NGGDGVFMLTK 299


>gi|256827313|ref|YP_003151272.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cryptobacterium curtum DSM 15641]
 gi|256583456|gb|ACU94590.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cryptobacterium curtum DSM 15641]
          Length = 377

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 71/331 (21%), Positives = 119/331 (35%), Gaps = 73/331 (22%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +    G S   +  D D  L   +R  L     R    E +  I G  DF  + + 
Sbjct: 39  AQWLVSEALGCSRIALYADIDRPLSAEERTILREYTRRRAAGEPLQYITGSVDFRFITIK 98

Query: 67  LSSDT-----------------FEPRPE------------------------TELLVDSA 85
           +                      +PR +                        +  + D+A
Sbjct: 99  VRPGVLIPRPETEVLMSEALSELKPRIDEWRSFERESLLRRELQAQMTAAGASTTVADNA 158

Query: 86  LAFSLPRIEKRD----------------------------VVRILDLGTGTGAVCLALLK 117
           L  +L                                    +R +D  TGTG +  +L +
Sbjct: 159 LKQALEERGNSTYNSEAVIGANTNKNEAEDNPLTLPVAPLPLRFVDACTGTGCIAASLAR 218

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           E P    +  DIS +A  +A  NA    VS+R D +  +    V+    G  D+++SNPP
Sbjct: 219 EVPSSSIIATDISAEACALAAENAADLSVSDRVDVVSCNVLDGVDPNWQGTVDLVISNPP 278

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI + ++  +  EV  F+PR++LDGG DGL  +R + D     L   G+ +VE+  +   
Sbjct: 279 YIPTDVLQSIDQEVTAFEPRLALDGGEDGLDVFRRLLDQAPALLVPGGVLAVELHEDCLS 338

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               +  +     +   +D  G  RVL+  +
Sbjct: 339 QARSLAAAAGFDDIRIAQDLAGRPRVLIAHK 369


>gi|212635903|ref|YP_002312428.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella piezotolerans WP3]
 gi|212557387|gb|ACJ29841.1| Modification methylase HemK [Shewanella piezotolerans WP3]
          Length = 314

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSS--HQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  +   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEQLGQQVIHSNLTIS--EKHKIVELIIRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   +      PR     L+ +  +   P +  + V R++DL TG+G + +A   E
Sbjct: 98  MFAGLEFYVDERVLVPRSPIAELIANRFS---PWLYNKQVNRVMDLCTGSGCIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  ALE+A+ N  T GV +R   ++SD FS++     +D+IVSNPPY++
Sbjct: 155 FEDAEVDALDISDDALEVAQINIETLGVMDRVFPMESDLFSAIPKGPQYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P I L  G DGL   + I    + +L +DGL  VE+G N  V ++
Sbjct: 215 AEDIGDMPDEY-HHEPEIGLASGRDGLDLTKRILANAADYLTEDGLLVVEVG-NSMVHII 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F        +      G D V +  R
Sbjct: 273 EQFPDVPFTWASFE---NGGDGVFILSR 297


>gi|300361413|ref|ZP_07057590.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|300354032|gb|EFJ69903.1| protein-(glutamine-N5) methyltransferase [Lactobacillus gasseri
           JV-V03]
          Length = 280

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 15/264 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G +  +  +  +  L+  Q       + +  +  S   ILG+  FY  ++
Sbjct: 23  DVDYVLGERLGYTPSEFALHINDELNLDQEKQALKDMKKLRRGISPQYILGYAWFYGYKI 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG- 124
            ++     PR ETE LV  AL         +   +ILDLGTG+GA+ +AL+K++   K  
Sbjct: 83  LVNRGVLIPRFETEELVKWALENI------KSGEKILDLGTGSGAIMVALVKQAQDQKIE 136

Query: 125 ----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DI+  AL  ++ N +   +     T +++    +E  FD IVSNPPYI++   
Sbjct: 137 NLILYASDITDAALRESEENFLKYDLD--VKTRKANVLVGLE-KFDTIVSNPPYIKTSEK 193

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + +   V   +P  +L GG DGL  YR  A  +  HL   G   +E  +++K  +  +FE
Sbjct: 194 NLMDANVIKNEPDTALYGGEDGLDFYRKFAKQIRSHLYSHGQFFLEFSFSEKDQLKDLFE 253

Query: 241 -SRKLFLVNAFKDYGGNDRVLLFC 263
                F +    D  G  R++   
Sbjct: 254 TELPDFKIEFRNDLAGKPRMVHGR 277


>gi|308380039|ref|ZP_07488465.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011]
 gi|308399357|ref|ZP_07492977.2| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012]
 gi|18275934|sp|Q10602|HEMK_MYCTU RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MtuHHemKP
 gi|308362831|gb|EFP51682.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu011]
 gi|308366497|gb|EFP55348.1| hypothetical protein hemK [Mycobacterium tuberculosis SUMu012]
          Length = 304

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 22  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 80  VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 134

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 135 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPRLLPELDGQVDLMVSNPPYIPD 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 195 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 252

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +  S KLF  V A KD  G  R +   R
Sbjct: 253 LVSSTKLFVDVQARKDLAGRPRFVTAMR 280


>gi|322831933|ref|YP_004211960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rahnella sp. Y9602]
 gi|321167134|gb|ADW72833.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rahnella sp. Y9602]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F ++   +      PR     L+    + 
Sbjct: 68  LTSSERHRIVERVIRRVNERVPVAYLTNKAWFCDMEFYVDERVLVPRSPIGELI----SN 123

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               I       ILD+ TG+G + +A     P  +   VDIS  AL +A+ N  T+G+  
Sbjct: 124 RFSGILSEQPQHILDMCTGSGCIAIACAYAFPETEVDAVDISADALAVAERNIDTHGIEN 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F  +    +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R
Sbjct: 184 WVTPIRSDLFRELPPLQYDLIVTNPPYVDEEDMSDLPQEYR-HEPVLGLASGSDGLKLTR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  +G+   E+G N  V ++  +       +       G D V +  +
Sbjct: 243 RILACAPDYLTDNGVLICEVG-NSMVHLMEQYPQIPFTWLEFE---NGGDGVFMLTK 295


>gi|88608405|ref|YP_506028.1| HemK family modification methylase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600574|gb|ABD46042.1| modification methylase, HemK family [Neorickettsia sennetsu str.
           Miyayama]
          Length = 289

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 12/262 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D+   L  V  L+  Q+I+  +  + D Q       +     H S+  I+G ++F+   
Sbjct: 35  LDAELLLAHVLSLNREQLILYCNEGMTDSQAMDFEMLLKLRKSH-SVAAIVGEKEFWKHS 93

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFK 123
             ++ D   PRP+T    ++ L   L R +K    ++I++LGTG+G V +++LKE     
Sbjct: 94  FAVNKDVLIPRPDT----ETMLVALLSRYKKLTQPLKIVELGTGSGCVIISILKEFRNAL 149

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIV 180
           G G + S  A  +   N +  G+  R    +  + S+   +    DVIVSNPPY+    +
Sbjct: 150 GFGFEKSRAAFYLTMHNMLKYGLRARLKLYRLGFESAMRVLSCKVDVIVSNPPYVRRGEI 209

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L LEV++ +PRI+LDGG +G+  Y +I    S+ L   G   +EIG + +  VV    
Sbjct: 210 PYLQLEVQN-EPRIALDGGFNGILPYFSILKLASKILRPGGEIFLEIGSSWRDSVVS--A 266

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
           +    +V  ++D  G +R+L+ 
Sbjct: 267 NYPFKIVERYRDLSGIERILVL 288


>gi|324009251|gb|EGB78470.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 57-2]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  + +     +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPNVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|195385016|ref|XP_002051204.1| GJ14693 [Drosophila virilis]
 gi|194147661|gb|EDW63359.1| GJ14693 [Drosophila virilis]
          Length = 335

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 107/262 (40%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  D   +     Q       +        +  I+G  DF ++ L  +
Sbjct: 73  IVSHVLNRKFNTVPDDFTQLKFSSEQLANFERFLEARCARMPLQHIIGEWDFMDITLKTA 132

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +        +   V +L++G G+GA+ L++L   P  +   ++
Sbjct: 133 PTVFIPRPETEEFVRLVIE----NYRQAKHVNMLEVGCGSGAMSLSVLHALPQVEATAIE 188

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ +RF                  +  +D+I+SNPPY+++    
Sbjct: 189 RSKVATVLAWENANLLGLQDRFKVHNHTMEEDNYMPTELQDKQYDLIISNPPYVKTEEFQ 248

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL   G   +E+G      V  I   
Sbjct: 249 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNEHPPLVKTIMNL 308

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V ++ D    +R +
Sbjct: 309 KYQGRLNFVGSYFDQYKRERFV 330


>gi|170681331|ref|YP_001744531.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218554885|ref|YP_002387798.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|218705860|ref|YP_002413379.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|293405796|ref|ZP_06649788.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298381479|ref|ZP_06991078.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302]
 gi|300817463|ref|ZP_07097680.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 107-1]
 gi|300936910|ref|ZP_07151797.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 21-1]
 gi|301024163|ref|ZP_07187873.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 69-1]
 gi|331653775|ref|ZP_08354776.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M718]
 gi|331663848|ref|ZP_08364758.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA143]
 gi|170519049|gb|ACB17227.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli SMS-3-5]
 gi|218361653|emb|CAQ99249.1| N5-glutamine methyltransferase [Escherichia coli IAI1]
 gi|218432957|emb|CAR13851.1| N5-glutamine methyltransferase [Escherichia coli UMN026]
 gi|284922318|emb|CBG35403.1| putative methylase [Escherichia coli 042]
 gi|291428004|gb|EFF01031.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli FVEC1412]
 gi|298278921|gb|EFI20435.1| adenine-specific DNA-methyltransferase [Escherichia coli FVEC1302]
 gi|300396707|gb|EFJ80245.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 69-1]
 gi|300458021|gb|EFK21514.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 21-1]
 gi|300530089|gb|EFK51151.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 107-1]
 gi|331048624|gb|EGI20700.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M718]
 gi|331059647|gb|EGI31624.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA143]
          Length = 310

 Score =  213 bits (542), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|17546107|ref|NP_519509.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia solanacearum GMI1000]
 gi|17428403|emb|CAD15090.1| probable methylase/methyltransferase protein [Ralstonia
           solanacearum GMI1000]
          Length = 304

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 43  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAYM 102

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  LA  LP   +     +L+L TG+G + +    + P
Sbjct: 103 HGMRFYVDERVIVPRSFIGELLEEGLAPWLPH--EDGPTDVLELCTGSGCLAILAALQWP 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N    G++      + D ++ +     +DVI++NPPY+   
Sbjct: 161 NATLDAVDLSPDALVVAQRNVDDYGLNGCIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 220

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 221 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 278

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G+D+V L  R
Sbjct: 279 FPDLDLVWLPT---SAGDDQVFLVTR 301


>gi|110642534|ref|YP_670264.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 536]
 gi|110344126|gb|ABG70363.1| hypothetical adenine-specific methylase YfcB [Escherichia coli 536]
          Length = 421

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 161 LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 220

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 221 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 276

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 277 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 335

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 336 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 394

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 395 --D-NGGDGVFMLTK 406


>gi|239917333|ref|YP_002956891.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665]
 gi|281414187|ref|ZP_06245929.1| putative methylase of HemK family protein [Micrococcus luteus NCTC
           2665]
 gi|239838540|gb|ACS30337.1| putative methylase of HemK family [Micrococcus luteus NCTC 2665]
          Length = 300

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 22/274 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD--PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+   L  V GL    ++      +V +  Q       + R    E +  + G   F
Sbjct: 25  PRVDAELLLGHVLGLDRGALLARVFAGAVAEPAQAAGFEALVGRRAAREPVQHLTGVAHF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-- 118
           + + L +    F PRPETELLV++ +A    R        ++DL TG+GA+ +A+     
Sbjct: 85  HGLDLAVGPGVFIPRPETELLVEAVVADLAAR---PAAGVVVDLCTGSGAIAVAVAAWGE 141

Query: 119 ---SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
               P      V++   A + A+ N    G     D  Q D       +EG  DV+VSNP
Sbjct: 142 ARGRPLA-VTAVELDPTAADWARRNLAPRG----VDLRQGDALVACPDLEGRVDVVVSNP 196

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+    V     E R  DP  +L GG   GL   R IA   +  L  DGL ++E    Q
Sbjct: 197 PYVPEAEVPA-QPEARL-DPARALYGGDAPGLRIPRAIAHRAAELLAPDGLFAMEHHETQ 254

Query: 232 KVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
              ++    +      V    D    DR L   R
Sbjct: 255 GPALLAALGADPRFTGVRVHPDLTARDRFLTARR 288


>gi|261252337|ref|ZP_05944910.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP
           102891]
 gi|260935728|gb|EEX91717.1| hypothetical adenine-specific methylase yfcB [Vibrio orientalis CIP
           102891]
          Length = 310

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTTSERMRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNIIVSNPPYVDQEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L   G+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDSGILICEVG-NSMVHMMEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|255745143|ref|ZP_05419092.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
           101]
 gi|262153467|ref|ZP_06028597.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
           91/1]
 gi|262167477|ref|ZP_06035183.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
 gi|262191367|ref|ZP_06049557.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
           5369-93]
 gi|255736973|gb|EET92369.1| hypothetical adenine-specific methylase yfcB [Vibrio cholera CIRS
           101]
 gi|262024049|gb|EEY42744.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae RC27]
 gi|262030704|gb|EEY49338.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae INDRE
           91/1]
 gi|262032742|gb|EEY51290.1| hypothetical adenine-specific methylase yfcB [Vibrio cholerae CT
           5369-93]
 gi|327484646|gb|AEA79053.1| Ribosomal protein L3 methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 310

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   + S    PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFE 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ 
Sbjct: 127 PWL----TEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 242 RRILANAPLYLKENGILVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|323967772|gb|EGB63184.1| protein-(glutamine-N5) methyltransferase [Escherichia coli M863]
 gi|323977468|gb|EGB72554.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TW10509]
 gi|327252601|gb|EGE64260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli STEC_7v]
          Length = 310

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|313681984|ref|YP_004059722.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154844|gb|ADR33522.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sulfuricurvum kujiense DSM 16994]
          Length = 274

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 10/260 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   L           I   D  +DD     L   I +  ++  +  +     FY+
Sbjct: 23  PRREAELLLMAYLQKDQLYFITHQDDFIDDND-PRLFEWIEKRSRNVPLEYLTNRVSFYS 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETE LVD  L     R+   DV+ I+++G G+G + + L    P  
Sbjct: 82  REFYIDEGALIPRPETEHLVDEVL----SRVPADDVITIVEVGIGSGIISILLALHLPQA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + + VDIS KAL +A+ N    G+S+R +  + D  S ++   D++VSNPPYI     D 
Sbjct: 138 RLIAVDISPKALAVARRNIEAFGLSDRIELREGDLLSCIDEKIDLLVSNPPYIAH---DA 194

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                  ++P+ +L GG  G    + + D V +      + + E+GY+Q++ V    +S 
Sbjct: 195 PLESNLSYEPQNALFGGDVGDEIIQRLLDEVYKRRIP--MFACEMGYDQRIKVQEYLKSF 252

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
            +  ++ + DY   DR  + 
Sbjct: 253 AVQSLDFYTDYASFDRGFIL 272


>gi|212712228|ref|ZP_03320356.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
           30120]
 gi|212684974|gb|EEB44502.1| hypothetical protein PROVALCAL_03314 [Providencia alcalifaciens DSM
           30120]
          Length = 310

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSVLDDR----QRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D PD +L  R    +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPMDLPDELLTSRLTPTERHRIIERVLRRINERIPVAYLTNSSWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     L      +   ILDL TG+G + +A   E P  +   VDIS
Sbjct: 110 VLIPRSPIGELINNHFVGLLS----DEPQTILDLCTGSGCIAIACAYEFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
              L + + N   +G+  R   ++SD F  +    +D+IV+NPPY+++  +D L  E R 
Sbjct: 166 TDVLAVTEQNIANHGLEHRVIPIRSDLFRDMPEVKYDLIVTNPPYVDAEDMDDLPQEFRV 225

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P ++L  G DGL   R I     R LN+DG+   E+G N  V ++  +       ++ 
Sbjct: 226 -EPELALAAGSDGLKLVRRILANAPRFLNEDGILVCEVG-NSMVHLIEQYPDIPFIWLDF 283

Query: 250 FKDYGGNDRVLLFCR 264
                G D V +  R
Sbjct: 284 E---FGGDGVFMLTR 295


>gi|53729016|ref|ZP_00134269.2| COG2890: Methylase of polypeptide chain release factors
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208419|ref|YP_001053644.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae L20]
 gi|307250187|ref|ZP_07532145.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307256997|ref|ZP_07538773.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|126097211|gb|ABN74039.1| hypothetical adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306857786|gb|EFM89884.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306864481|gb|EFM96388.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 314

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 13/243 (5%)

Query: 12  CRVTGLSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
                LS+  + +D P+++    L   ++  +   +++ L   + +  +     F     
Sbjct: 53  SHQLVLSALNLPIDVPEAMYSSNLTRIEKERIIEMVIQRLGMRKPVAYLTNSAWFCGAEY 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  +  
Sbjct: 113 YVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEVD 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +D + 
Sbjct: 169 AVDLSLDALDVAQINIERHQVAHRVFPISSDLFTDIPQDKYDLIVTNPPYVDQEDLDDMP 228

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S   
Sbjct: 229 QEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLMEQFPSVPF 286

Query: 245 FLV 247
             V
Sbjct: 287 HWV 289


>gi|127513345|ref|YP_001094542.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella loihica PV-4]
 gi|126638640|gb|ABO24283.1| modification methylase, HemK family [Shewanella loihica PV-4]
          Length = 314

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIHSN--LTSSEKHKIVELIIRRVRERLPVPYLTNRA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   +      PR     ++ +  +   P +  + V RILDL TG+  + +A   E
Sbjct: 98  FFAGLEFYVDDRVLVPRSPIAEMIANRFS---PWLYNKPVNRILDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  ALE+A+ N  + GV +R   ++SD F+++     +D+IVSNPPY++
Sbjct: 155 FEDAEVDAIDISSDALEVAQINIESLGVMDRVFPIESDMFAAIPKGPQYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P + L  G DGL   + I    + +L +DGL  VE+G N  V ++
Sbjct: 215 AEDIGDMPEEY-HHEPELGLASGRDGLDLTKRILANAADYLTQDGLLVVEVG-NSMVHLM 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F       VN      G D V +  R
Sbjct: 273 EQFPEVPFTWVNFEH---GGDGVFVLTR 297


>gi|165976362|ref|YP_001651955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
 gi|303251386|ref|ZP_07337563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307252569|ref|ZP_07534464.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|165876463|gb|ABY69511.1| putative adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302649740|gb|EFL79919.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306859974|gb|EFM91992.1| Uncharacterized adenine-specific methylase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 314

 Score =  212 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 58/243 (23%), Positives = 109/243 (44%), Gaps = 13/243 (5%)

Query: 12  CRVTGLSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRL 65
                LS+  + +D P+++    L   ++  +   +++ L   + I  +     F     
Sbjct: 53  SHQLVLSALNLPIDVPEAMYSSNLTRIEKERIIEMVIQRLGMRKPIAYLTNSAWFCGAEY 112

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR     L+       L    + +  RILD+ TG+G + +A  +  P  +  
Sbjct: 113 YVDERVIVPRSPIGELIQQGFTGIL----RAEPKRILDMCTGSGCIAIACAERFPHAEVD 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLG 184
            VD+S  AL++A+ N   + V+ R   + SD F+ +    +D+IV+NPPY++   +D + 
Sbjct: 169 AVDLSLDALDVAQINIERHQVAHRVFPISSDLFTDIPQDKYDLIVTNPPYVDQEDLDDMP 228

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P ++L  G+DGL   + I      +L  +G+   E+G N  V ++  F S   
Sbjct: 229 QEF-HHEPELALGSGVDGLDITKRILAEAPNYLADNGVLVCEVG-NSMVHLIEQFPSVPF 286

Query: 245 FLV 247
             V
Sbjct: 287 HWV 289


>gi|323168496|gb|EFZ54176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella sonnei 53G]
          Length = 310

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|241667313|ref|ZP_04754891.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254875865|ref|ZP_05248575.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841886|gb|EET20300.1| modification methylase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 314

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   +     +S H +  +     +L + ++  +     R+ + + +  IL    F  +
Sbjct: 45  EAVHLVLSAINIS-HDIDSNMVAARLLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGM 103

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR     L+ +  +  +  I+  DV  +LDL TG+G + +A         
Sbjct: 104 EFDIDERVIIPRSPIAELIRNEFSPWINDID--DVTNVLDLCTGSGCIGIACSNVFEDAN 161

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              VDIS  AL +A  N   + +S+R   ++SD F +++G  +D+IVSNPPY++   ++ 
Sbjct: 162 ITLVDISDDALAVANHNIKKHQLSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNS 221

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E   ++P+++L+ G DGL   + I     +++ + G+  VE+G +Q   ++ +    
Sbjct: 222 MPQEY-HYEPKLALEAGNDGLDLAKRIILEADQYMTEKGVLIVEVGNSQ-YALMDLCPDI 279

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               + +F D  G D V L  
Sbjct: 280 PFTWL-SFAD--GGDGVFLLT 297


>gi|327394635|dbj|BAK12057.1| methylase HemK family protein YfcB [Pantoea ananatis AJ13355]
          Length = 292

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  +   ++R +     +  +     F      +      PR     L+++ 
Sbjct: 47  NARLTASERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELIENR 106

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  +          ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G
Sbjct: 107 FAGLI----TDKPRHILDMCTGSGCIAIACAYAFPDAEVDAVDISHDALAVAEQNIEEHG 162

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +      +++D F  +    +D+IV+NPPY+++  +D L  E    +P + L  G DGL 
Sbjct: 163 LIHHVTPIRADLFRELPPVQYDLIVTNPPYVDAEDMDDLPSEY-QHEPELGLAAGSDGLK 221

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L++ G+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 222 LVRRILACAPGYLSEQGVLICEVG-NSMVHMMEQYPDVPFTWLEF--D-NGGDGVFMLTR 277


>gi|332668240|ref|YP_004451028.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332337054|gb|AEE54155.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 280

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 9/261 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A   +        GL   Q      + L   Q   L       L  + +  ILG  DFY
Sbjct: 19  EAQSIARIVFEDCFGLQPPQ---FSHAQLTTAQNEQLQAIQEALLAGQPLQYILGQADFY 75

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  +      PRPETE LV+  L        +++   +LD+GTG+G + + + K++P 
Sbjct: 76  GLKFKVDPRVLIPRPETEELVEWVLETIKTHYPQQNP-SVLDIGTGSGCIPITIAKKTPR 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               G+D+S  AL +A+ NA  N V  ++   D L  + ++S+  +FD+I+SNPPYI   
Sbjct: 135 ATVWGLDVSAAALALAEENAHLNQVEVQWQEQDILNQEAWTSLP-IFDLIISNPPYIPQR 193

Query: 179 IVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +V + +P ++L     D L  YR+IA     HL+  G    E      ++V +
Sbjct: 194 EQVLMPAQVSNHEPHLALFVPDEDPLLFYRSIAAFAQIHLHPTGHLFFECNEYNALEVKQ 253

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           + E      V   +D  G  R
Sbjct: 254 LLEEMGWSDVLLKEDLSGKLR 274


>gi|195156175|ref|XP_002018976.1| GL26107 [Drosophila persimilis]
 gi|194115129|gb|EDW37172.1| GL26107 [Drosophila persimilis]
          Length = 330

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  +   +  D +Q       +        +  I+G  DF ++ L  +
Sbjct: 68  IVSHVLKRKFNTVPDNFSQLHFDQKQLADFERFLEARCARMPLQHIIGEWDFLDITLKTA 127

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ L++L   P  +   ++
Sbjct: 128 PTVFIPRPETEEFVRLVIE----NYKNVKHVNMLEVGCGSGAMSLSILHALPRVEATAIE 183

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ +RF                  +  +D+I+SNPPY+++    
Sbjct: 184 RSKAATVLAAENAKLLGLQDRFQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQ 243

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL+  G   +E+G      V  I   
Sbjct: 244 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLHSGGKLWLELGNEHPPLVKTIMHL 303

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V ++ D    +R +
Sbjct: 304 KYEGRLNFVGSYYDQYKRERFV 325


>gi|152981411|ref|YP_001353763.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Janthinobacterium sp. Marseille]
 gi|151281488|gb|ABR89898.1| modification methylase HemK [Janthinobacterium sp. Marseille]
          Length = 296

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L   ++    D+ L   +   +   I +   +      I      
Sbjct: 35  NALDEAAYLILHTLKLPLDKLDPFFDARLLQEEVDAVLRVIEQRADERLPAAYITNEGWL 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+    +  +   +K  V  IL+L TG+G + + L    P
Sbjct: 95  GGYRFYVDERVIVPRSFIAELIPEQFSPWVSNPDK--VNNILELCTGSGCLPIMLADAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VDIS  ALE+AK N     +  R + ++SD +++V E  FD+I++NPPY+ S  
Sbjct: 153 NAHVDAVDISTDALEVAKRNVEEYELGHRINLIESDLYANVPEYKFDLIITNPPYVNSGS 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  E    +P+I+L GG DG+   R I  G  + L  +GL  VEIG N++      F
Sbjct: 213 MDKLPPEYLR-EPQIALAGGTDGMDLVRKIVAGAGQRLTPNGLLMVEIG-NEREFAEAAF 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  +       G+D V L  
Sbjct: 271 PDLNLTWLTT---SAGDDMVFLIT 291


>gi|299067442|emb|CBJ38641.1| putative adenine-specific methylase [Ralstonia solanacearum CMR15]
          Length = 300

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 39  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAYM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  L   LP   +     +L+L TG+G + +    + P
Sbjct: 99  HGMRFYVDERVIVPRSFIGELLEEGLTPWLPH--EDGPTDVLELCTGSGCLAILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N    G+++     + D ++ +     +DVI++NPPY+   
Sbjct: 157 NATLDAVDLSPDALVVAQRNVDNYGLNDSIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G+D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGDDQVFLVTR 297


>gi|300717709|ref|YP_003742512.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
 gi|299063545|emb|CAX60665.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
          Length = 310

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L++   A 
Sbjct: 68  LTSSERHRIVERVIRRINERIPVSYLTNKAWFCGHEFYVDERVLVPRSPIGELINDRFAA 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +P   K     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G++ 
Sbjct: 128 LIPDEPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDISTDALAVTEQNIEAHGLTH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               +++D F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   R
Sbjct: 184 SVTPIRADLFRELPKTPYDLIVTNPPYVDEDDMDDLPNEYR-HEPELGLAAGRDGLKLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 243 RILANAPDYLSEQGVLICEVG-NSMVHMIDQYPDVPFTWLEFA---NGGDGVFMLTR 295


>gi|219870756|ref|YP_002475131.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parasuis SH0165]
 gi|219690960|gb|ACL32183.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parasuis SH0165]
          Length = 314

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 8/222 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   + + L   + +  +     F  +   +      PR     L+      
Sbjct: 76  LTRVEKERIVEMVEQRLGLRKPVAYLTNSAWFSGLEFYVDERVIVPRSPIGELIQQGFTG 135

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    + +  RILD+ TG+G + +A   + P  +   VD+S  AL +A+ N   + ++ 
Sbjct: 136 IL----RAEPKRILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAH 191

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R    QSD F  +    +D+IV+NPPY++   +D +  E    +P ++L  G DGL   +
Sbjct: 192 RVFPFQSDLFDDLPQDRYDLIVTNPPYVDQEDLDDMPEEF-HHEPEMALGSGADGLDITK 250

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            I    +  L+ +G+   E+G N  V ++  F S     +  
Sbjct: 251 RILAQAADFLSDNGVLVCEVG-NSMVHLIEQFPSVPFHWLEF 291


>gi|148549090|ref|YP_001269192.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida F1]
 gi|148513148|gb|ABQ80008.1| modification methylase, HemK family [Pseudomonas putida F1]
 gi|313500007|gb|ADR61373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida BIRD-1]
          Length = 302

 Score =  212 bits (541), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 8/252 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D +L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGAVHLPWEVADSYLDCMLEDDERVRLQHLLKRRIEERVPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +      P
Sbjct: 93  CGMSFIVDERVLVPRSPIGQLIEKRFEPWL----ASEPARILDLCTGSGCIGIVAADVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+  R  T+Q D F  + G  FD+I+SNPPY+++  
Sbjct: 149 EAEVVLADLSFQALEVANQNIERHGLDGRVYTVQGDGFGGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  E    +P + L  G DGL   R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FDDMPAEY-HHEPELGLACGSDGLDLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFK 251
                  +   +
Sbjct: 267 PEVDFAWLEFER 278


>gi|209965908|ref|YP_002298823.1| modification methylase,hemK family [Rhodospirillum centenum SW]
 gi|209959374|gb|ACJ00011.1| modification methylase,hemK family [Rhodospirillum centenum SW]
          Length = 292

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 91/263 (34%), Positives = 128/263 (48%), Gaps = 5/263 (1%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+        GL    +        +          + R    E + R+LG  +F+ 
Sbjct: 23  PRLDAEYLAEAAFGLPRAALRRHGTDSPEAAAASRFAALVARRAAREPLQRLLGSWEFWG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LTL+ DT  PRP+TE +V++ L     R ++   +R+LDLGTG+GA+ LALL E P  
Sbjct: 83  LDLTLAPDTLIPRPDTETVVEAVL---RRRPDRTAPLRLLDLGTGSGAILLALLSEYPRA 139

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
            G+GVD+S  A   A  NA   G+S R   L   W +++     FDV+V NPPYI    +
Sbjct: 140 TGLGVDLSPAAAATAALNARRLGLSGRARFLAGSWAAALGEAARFDVVVGNPPYIPDDEI 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  EV   +PR +L GG DGL  YR IA  + R L   GL  +E G +Q   V  + E
Sbjct: 200 DGLEPEVARHEPRRALAGGADGLDCYRAIAAELPRLLLPGGLAVLEHGADQASAVAALLE 259

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +  L  V   +D  G DR  +  
Sbjct: 260 AAGLGPVGTVRDLAGRDRAAIAQ 282


>gi|227501695|ref|ZP_03931744.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725]
 gi|227077720|gb|EEI15683.1| HemK family methytransferase [Corynebacterium accolens ATCC 49725]
          Length = 277

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +       + +  +  +           + R  + E +  +LG   F  + L
Sbjct: 26  DTRILISHLIHCGHLDIPLH-EPPMPGFD-VAFQALLRRREQREPLQYVLGTAWFGPLEL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++ D A+  +          R++DL +G+GA+ L L    P  +  
Sbjct: 84  KVGPGVFIPRPETEVMADWAVHHA-------PGPRMVDLCSGSGALALYLQHYVPQAEVK 136

Query: 126 GVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V++S  ALE  ++N +  GV   + D   S   +   G  D++VSNPPY+       L 
Sbjct: 137 AVELSDAALEFTRANTLRTGVEVVQADATDSQALADWNGTVDLVVSNPPYVPED--PNLQ 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
            EV   DP +++ GG DG+   R +   ++R L   G+ ++E        V         
Sbjct: 195 PEVY-HDPHVAVFGGDDGMGVIRGLIPTIARLLRPGGVMAIEHDDTTGDAVRDAVRDHGG 253

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   KD  G  R +   R
Sbjct: 254 FSNIAPLKDLTGTPRFITAQR 274


>gi|325282554|ref|YP_004255095.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus proteolyticus MRP]
 gi|324314363|gb|ADY25478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Deinococcus proteolyticus MRP]
          Length = 284

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 108/263 (41%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+ + L   TGL     ++     L    R  L   + R L  E +  +LG  ++  
Sbjct: 20  AHSDAEALLEAGTGLGRTARLLRAQEALHPETRQRLDALLARRLAREPLQYLLGEVEWGG 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           VRL        PRPET    +  L  +L        V++ D+GTGTGA+ L      P  
Sbjct: 80  VRLRCDPRALIPRPET----EWLLHLALHDPATARAVQVADIGTGTGALALGWKAARPQT 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +    D+S  AL +A+ NA  NG+       Q D  + + G  F +I+SNPPY+      
Sbjct: 136 RVTATDLSADALALARENAALNGLD--VSFYQGDLLAPLTGQTFGLILSNPPYLPDQDRG 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV D DP ++L GG DGL+  R +A      L   G+  +E+              
Sbjct: 194 TLAPEV-DHDPALALYGGPDGLTLARRLAAQAPARLAAGGVLWLELDGRNAPAFAAELAG 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
           +         D  G  R +   R
Sbjct: 253 QGW-QAAVHADLTGRQRFVRAVR 274


>gi|167856506|ref|ZP_02479219.1| hypothetical adenine-specific methylase [Haemophilus parasuis
           29755]
 gi|167852370|gb|EDS23671.1| hypothetical adenine-specific methylase [Haemophilus parasuis
           29755]
          Length = 314

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 8/222 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   + + L   + +  +     F  +   +      PR     L+      
Sbjct: 76  LTRVEKERIIEMVEQRLGLRKPVAYLTNSAWFSGLEFYVDERVIVPRSPIGELIQQGFTG 135

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    + +  RILD+ TG+G + +A   + P  +   VD+S  AL +A+ N   + ++ 
Sbjct: 136 IL----RAEPKRILDMCTGSGCIAIACADKFPNAEIDAVDLSVDALNVAEINIERHNMAH 191

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R    QSD F  +    +D+IV+NPPY++   +D +  E    +P ++L  G+DGL   +
Sbjct: 192 RVFPFQSDLFDDLPQDRYDLIVTNPPYVDQEDLDDMPEEF-HHEPEMALGSGVDGLDITK 250

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            I    +  L+ +G+   E+G N  V ++  F S     +  
Sbjct: 251 RILAQAADFLSDNGVLVCEVG-NSMVHLIEQFPSVPFHWLEF 291


>gi|183602494|ref|ZP_02963859.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219683537|ref|YP_002469920.1| methylase protein [Bifidobacterium animalis subsp. lactis AD011]
 gi|241190568|ref|YP_002967962.1| methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195974|ref|YP_002969529.1| methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218135|gb|EDT88781.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219621187|gb|ACL29344.1| possible methylase protein [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248960|gb|ACS45900.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250528|gb|ACS47467.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793555|gb|ADG33090.1| Methylase of polypeptide chain release factor [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 304

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 74/286 (25%), Positives = 106/286 (37%), Gaps = 27/286 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPD---------SVLDDRQRFFLTNAIVRSLKHE 49
              D    +  V G S   V    I+  D            D        + + R    E
Sbjct: 22  PEHDVKLIMADVLGCSPSDVESAAIMRTDVRALCAKYGRDDDAELVHTFKHMVCRRHARE 81

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I+G   F  + L +    F PR ETEL+   A+ +           RI+DL  G+G
Sbjct: 82  PLQYIVGHAPFRYLDLKVGPGVFIPRQETELIAQDAIEWVTRH--GIYSPRIVDLCAGSG 139

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LAL  E P  +  GV++S +A    + N             N   E  D       +
Sbjct: 140 ALGLALATEIPGAQVWGVELSPQAAVWTRRNITQISRTYPDITANYHLEIADATCPITLA 199

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  DV+VSNPPY+    V     EVRDFDP ++L GG  DG+     I       L 
Sbjct: 200 HLDGTVDVVVSNPPYVPQSQVPQ-QPEVRDFDPSLALYGGSSDGMLIPEQIIRRAYALLR 258

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             GL  +E   +Q    V    +          D     R L+  +
Sbjct: 259 PGGLFLMEHDISQPDRTVAFARASGFSDARTGADLTYRPRYLVATK 304


>gi|161502470|ref|YP_001569583.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160863817|gb|ABX20440.1| hypothetical protein SARI_00514 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 310

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+  G+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDAGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|191165479|ref|ZP_03027320.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B7A]
 gi|194436322|ref|ZP_03068424.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli 101-1]
 gi|209919830|ref|YP_002293914.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli SE11]
 gi|218695929|ref|YP_002403596.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|253772746|ref|YP_003035577.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162339|ref|YP_003045447.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|256017512|ref|ZP_05431377.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|260856374|ref|YP_003230265.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|260869052|ref|YP_003235454.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300822206|ref|ZP_07102348.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 119-7]
 gi|300903722|ref|ZP_07121637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 84-1]
 gi|300922056|ref|ZP_07138198.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 182-1]
 gi|301304873|ref|ZP_07210977.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 124-1]
 gi|301328836|ref|ZP_07221878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 78-1]
 gi|309793214|ref|ZP_07687642.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 145-7]
 gi|312973409|ref|ZP_07787581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1827-70]
 gi|331669030|ref|ZP_08369878.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA271]
 gi|331678277|ref|ZP_08378952.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H591]
 gi|190904402|gb|EDV64110.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B7A]
 gi|194425050|gb|EDX41035.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli 101-1]
 gi|209913089|dbj|BAG78163.1| putative adenine-specific methylase [Escherichia coli SE11]
 gi|218352661|emb|CAU98442.1| N5-glutamine methyltransferase [Escherichia coli 55989]
 gi|242377963|emb|CAQ32732.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323790|gb|ACT28392.1| modification methylase, HemK family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974240|gb|ACT39911.1| N5-glutamine methyltransferase [Escherichia coli B str. REL606]
 gi|253978407|gb|ACT44077.1| N5-glutamine methyltransferase [Escherichia coli BL21(DE3)]
 gi|257755023|dbj|BAI26525.1| N5-glutamine methyltransferase [Escherichia coli O26:H11 str.
           11368]
 gi|257765408|dbj|BAI36903.1| N5-glutamine methyltransferase [Escherichia coli O111:H- str.
           11128]
 gi|300404304|gb|EFJ87842.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 84-1]
 gi|300421556|gb|EFK04867.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 182-1]
 gi|300525336|gb|EFK46405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 119-7]
 gi|300839802|gb|EFK67562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 124-1]
 gi|300844785|gb|EFK72545.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 78-1]
 gi|308123500|gb|EFO60762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 145-7]
 gi|310332004|gb|EFP99239.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1827-70]
 gi|315255268|gb|EFU35236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 85-1]
 gi|320199921|gb|EFW74510.1| Ribosomal protein L3 methyltransferase [Escherichia coli EC4100B]
 gi|323156482|gb|EFZ42637.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli EPECa14]
 gi|323176744|gb|EFZ62334.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1180]
 gi|323961403|gb|EGB57014.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H489]
 gi|323970953|gb|EGB66204.1| protein-(glutamine-N5) methyltransferase [Escherichia coli TA007]
 gi|324020853|gb|EGB90072.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 117-3]
 gi|324117792|gb|EGC11691.1| protein-(glutamine-N5) methyltransferase [Escherichia coli E1167]
 gi|331064224|gb|EGI36135.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA271]
 gi|331074737|gb|EGI46057.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H591]
          Length = 310

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|15925107|ref|NP_372641.1| protoporphyrinogen oxidase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927691|ref|NP_375224.1| hypothetical protein SA1919 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268568|ref|YP_001247511.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394632|ref|YP_001317307.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980432|ref|YP_001442691.1| hypothetical protein SAHV_2101 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253315786|ref|ZP_04838999.1| hypothetical protein SauraC_06505 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006905|ref|ZP_05145506.2| hypothetical protein SauraM_10565 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257793875|ref|ZP_05642854.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9781]
 gi|258407043|ref|ZP_05680193.1| modification methylase [Staphylococcus aureus A9763]
 gi|258422065|ref|ZP_05684982.1| HemK family modification methylase [Staphylococcus aureus A9719]
 gi|258433566|ref|ZP_05688639.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|258440461|ref|ZP_05690631.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|258445669|ref|ZP_05693847.1| HemK family modification methylase [Staphylococcus aureus A6300]
 gi|258450123|ref|ZP_05698218.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|258453422|ref|ZP_05701404.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5937]
 gi|269203753|ref|YP_003283022.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282894761|ref|ZP_06302987.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A8117]
 gi|282929041|ref|ZP_06336626.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A10102]
 gi|295407047|ref|ZP_06816849.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8819]
 gi|296275404|ref|ZP_06857911.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246046|ref|ZP_06929903.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8796]
 gi|13701911|dbj|BAB43203.1| SA1919 [Staphylococcus aureus subsp. aureus N315]
 gi|14247890|dbj|BAB58279.1| similar to protoporphyrinogen oxidase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741637|gb|ABQ49935.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947084|gb|ABR53020.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156722567|dbj|BAF78984.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257787847|gb|EEV26187.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A9781]
 gi|257841376|gb|EEV65820.1| modification methylase [Staphylococcus aureus A9763]
 gi|257841965|gb|EEV66397.1| HemK family modification methylase [Staphylococcus aureus A9719]
 gi|257849297|gb|EEV73276.1| protoporphyrinogen oxidase [Staphylococcus aureus A9299]
 gi|257852530|gb|EEV76448.1| protoporphyrinogen oxidase [Staphylococcus aureus A8115]
 gi|257855508|gb|EEV78445.1| HemK family modification methylase [Staphylococcus aureus A6300]
 gi|257856597|gb|EEV79503.1| protoporphyrinogen oxidase [Staphylococcus aureus A6224]
 gi|257864403|gb|EEV87149.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A5937]
 gi|262076043|gb|ACY12016.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus ED98]
 gi|282589347|gb|EFB94439.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A10102]
 gi|282762849|gb|EFC02983.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus A8117]
 gi|285817781|gb|ADC38268.1| Methylase of polypeptide chain release factors [Staphylococcus
           aureus 04-02981]
 gi|294968072|gb|EFG44099.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8819]
 gi|297177045|gb|EFH36300.1| protein-(glutamine-N5) methyltransferase [Staphylococcus aureus
           A8796]
 gi|315128788|gb|EFT84788.1| hypothetical protein CGSSa03_07701 [Staphylococcus aureus subsp.
           aureus CGS03]
          Length = 278

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 25  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 85  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 138

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 139 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 196

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I   +   + K      EIGYNQ   +   I    
Sbjct: 197 SPTVTRFEPHQALFADNHGYAIYESIIGDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 257 PDKKIDIIKDINGHDRIVSF 276


>gi|167626734|ref|YP_001677234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|167596735|gb|ABZ86733.1| modification methylase, HemK family [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 314

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 11/261 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           ++   +     +S H +  +     +L + ++  +     R+ + + +  IL    F  +
Sbjct: 45  EAVHLVLSAINIS-HDIDSNMVAARLLKEEKQKIIEYVYQRTCQRKPLPYILKKAWFAGM 103

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR     L+ +  +  +  I+  DV  +LDL TG+G + +A         
Sbjct: 104 EFDIDERVIIPRSPIAELIRNEFSPWINDID--DVTNVLDLCTGSGCIGIACSNVFEDAN 161

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              VDIS  AL +A  N   + +S+R   ++SD F +++G  +D+IVSNPPY++   ++ 
Sbjct: 162 ITLVDISDDALAVANHNIKKHQLSDRVKAVKSDLFDNLQGQKYDLIVSNPPYVDREDLNS 221

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E   ++P+++L+ G DGL   + I     +++ + G+  VE+G +Q   ++ +    
Sbjct: 222 MPQEY-HYEPKLALEAGDDGLDLAKRIILEADQYMTEKGVLIVEVGNSQ-YALMDLCPDI 279

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               + +F D  G D V L  
Sbjct: 280 PFTWL-SFAD--GGDGVFLLT 297


>gi|312830469|emb|CBX35311.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|329726314|gb|EGG62782.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Staphylococcus aureus subsp. aureus 21172]
          Length = 277

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 12/260 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V   +    +V     +          A+ R L  E I  I+G+  FY     
Sbjct: 24  AEWLMLDVFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFD 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+   PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    + 
Sbjct: 84  VNSNCLIPRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIA 137

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCL 183
            DIS +A+ +A++NA  +    +   L  D    +       + ++SNPPYI+   +  +
Sbjct: 138 TDISLEAMNMARNNAEKH--QSQIQFLTGDALKPLIKEGIKLNGLISNPPYIDEKDMVTM 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
              V  F+P  +L     G + Y +I   +   + K      EIGYNQ   +   I    
Sbjct: 196 SPTVTRFEPHQALFADNHGYAIYESIIGDLPHVMEKGSPVVFEIGYNQGEALKSIILNKF 255

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               ++  KD  G+DR++ F
Sbjct: 256 PDKKIDIIKDINGHDRIVSF 275


>gi|193062223|ref|ZP_03043318.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E22]
 gi|194429280|ref|ZP_03061807.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B171]
 gi|218548215|ref|YP_002382006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|218559243|ref|YP_002392156.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|260844918|ref|YP_003222696.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|300918497|ref|ZP_07135090.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 115-1]
 gi|331684003|ref|ZP_08384599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H299]
 gi|192931889|gb|EDV84488.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E22]
 gi|194412688|gb|EDX28983.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli B171]
 gi|218355756|emb|CAQ88369.1| N5-glutamine methyltransferase [Escherichia fergusonii ATCC 35469]
 gi|218366012|emb|CAR03756.1| N5-glutamine methyltransferase [Escherichia coli S88]
 gi|257760065|dbj|BAI31562.1| N5-glutamine methyltransferase [Escherichia coli O103:H2 str.
           12009]
 gi|294493265|gb|ADE92021.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli IHE3034]
 gi|300414311|gb|EFJ97621.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 115-1]
 gi|307626133|gb|ADN70437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|315288305|gb|EFU47704.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 110-3]
 gi|323162221|gb|EFZ48081.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli E128010]
 gi|323170399|gb|EFZ56052.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli LT-68]
 gi|323952123|gb|EGB47997.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H252]
 gi|323955852|gb|EGB51607.1| protein-(glutamine-N5) methyltransferase [Escherichia coli H263]
 gi|324112867|gb|EGC06843.1| protein-(glutamine-N5) methyltransferase [Escherichia fergusonii
           B253]
 gi|331078955|gb|EGI50157.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli H299]
 gi|332754980|gb|EGJ85345.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 4343-70]
 gi|333001804|gb|EGK21370.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-218]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|323496540|ref|ZP_08101594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
 gi|323318384|gb|EGA71341.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio sinaloensis DSM 21326]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTSSERLRVVERVVKRINDRTPTAYLTNRAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      + VRI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLV----EEPVRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDEEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L  +G+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTDNGILICEVG-NSMIHMMEQYPHIPFTWIEFEN--GGHG-VFMLTR 295


>gi|332344114|gb|AEE57448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific PrmB [Escherichia coli UMNK88]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  + R  +     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLISRQPQ----HILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|302185078|ref|ZP_07261751.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae 642]
          Length = 302

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R + +      +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPCEIADSYLDCRLEVDEISELQRLIKRRIDERVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++   A  L      +  RILDL TG+G + +A  +  P
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWL----ADEPARILDLCTGSGCIGIACAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 EAEVALADLSYDALEVANQNIERHGMEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P ++L  G DGL+  R +    + HL++ GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELALACGSDGLNLVRRMLAQAADHLHEKGLLIVEVGNSQ-VHVQALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|298252616|ref|ZP_06976410.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis 5-1]
 gi|297532980|gb|EFH71864.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis 5-1]
          Length = 304

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 112/285 (39%), Gaps = 26/285 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  D+   L    G+S  ++    I+   +          ++ +      E +  I+G  
Sbjct: 23  AEYDARLLLAHACGVSLAELSKALILGDLTDFSQDYASKYSDFVSMRASREPLQHIVGRA 82

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +    F PRPETE++V++ L +   R        ++DL  G+GA+ L++  E
Sbjct: 83  PFRYLDLQVGKGVFVPRPETEIVVEAGLDWL--RESGISKPTVVDLCAGSGAIGLSIAAE 140

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTN-------GVSERFDTLQSDW-----------FSS 160
               +   V+ S +A +  + N            +  R+  + +D              +
Sbjct: 141 VADAQVWAVEKSPEAFQYLQKNFEETAKKWENIQIFSRYHAVLADATKSHISDCTPELHA 200

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNK 219
           + G  D++++NPPY+    V    +EVR++DP ++L GG  DGL     I       L  
Sbjct: 201 ICGKVDLVITNPPYVPESQVPE-QVEVREYDPPLALYGGSADGLLIPEQIMRAAFALLKS 259

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G   +E   +Q   + +  ES          D  G  R     +
Sbjct: 260 GGAMVMEHDISQGDALKKYAESVGFSRARVGNDLTGRPRYTFAEK 304


>gi|310768216|gb|ADP13166.1| putative adenine-specific methylase [Erwinia sp. Ejp617]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L++   A 
Sbjct: 68  LTLSERQRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINQHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +
Sbjct: 128 IIGHQPQ----HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++ D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R
Sbjct: 184 HVTPIRCDLFRELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 243 RILGCAAEYLSEQGVLICEVG-NSMVHLIEQYPDVPFTWLEFE---NGGDGVFMLTR 295


>gi|157155888|ref|YP_001463675.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli E24377A]
 gi|218690490|ref|YP_002398702.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|218700806|ref|YP_002408435.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|293446667|ref|ZP_06663089.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|307311109|ref|ZP_07590753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli W]
 gi|309784960|ref|ZP_07679593.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 1617]
 gi|331673831|ref|ZP_08374594.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA280]
 gi|157077918|gb|ABV17626.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E24377A]
 gi|218370792|emb|CAR18605.1| N5-glutamine methyltransferase [Escherichia coli IAI39]
 gi|218428054|emb|CAR08973.2| N5-glutamine methyltransferase [Escherichia coli ED1a]
 gi|291323497|gb|EFE62925.1| protein-(glutamine-N5) methyltransferase [Escherichia coli B088]
 gi|306908615|gb|EFN39112.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli W]
 gi|308927330|gb|EFP72804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella dysenteriae 1617]
 gi|315061623|gb|ADT75950.1| N5-glutamine methyltransferase [Escherichia coli W]
 gi|320196199|gb|EFW70823.1| Ribosomal protein L3 methyltransferase [Escherichia coli WV_060327]
 gi|323184350|gb|EFZ69726.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli 1357]
 gi|323377796|gb|ADX50064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli KO11]
 gi|331069104|gb|EGI40496.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli TA280]
 gi|333001475|gb|EGK21043.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri VA-6]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|208434969|ref|YP_002266635.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter
           pylori G27]
 gi|208432898|gb|ACI27769.1| S-adenosyl methionine-dependent methyltransferase [Helicobacter
           pylori G27]
          Length = 274

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEARFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +    +++VSNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKQTHLWDRMP-TIEMLVSNPPYIARNYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +  GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEAFFGGVKGDEILKEIVFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFVG 269


>gi|261340723|ref|ZP_05968581.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cancerogenus ATCC 35316]
 gi|288317140|gb|EFC56078.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enterobacter cancerogenus ATCC 35316]
          Length = 310

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFFVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     +    +     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFEGLIQHQPQ----HILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPTLQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGSDGLKLTRRILACAPDYLTDDGVLICEVG-NSMVHLIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|159039552|ref|YP_001538805.1| HemK family modification methylase [Salinispora arenicola CNS-205]
 gi|157918387|gb|ABV99814.1| modification methylase, HemK family [Salinispora arenicola CNS-205]
          Length = 304

 Score =  212 bits (540), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 106/270 (39%), Gaps = 16/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++      V G+   ++ +         QR      + R    E +  + G   F  
Sbjct: 36  ARGEAEVLAAYVLGVPRGRLALADG--FTAAQRHRFDALVTRRAAREPLQYLTGSAPFRY 93

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETELL    +  +     +     ++DL +G+GA+ LA+ +E P  
Sbjct: 94  LELAVGPGVFVPRPETELLAGWGVEQAR----REAAPLVVDLCSGSGAIALAVAQEVPAA 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           + V V+ S  AL   + N  +              D    D  + + G  DV++ NPPY+
Sbjct: 150 RVVAVEGSPAALSWLRRNVASRAAGGDRAVEVVAADVTAPDLLAELLGRVDVLLCNPPYV 209

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            + IV  +  EV   DP  ++  G+DGL+  R++    +  L   G   +E        V
Sbjct: 210 PADIV--VPPEVGRHDPPGAVFAGVDGLAVVRSVVPRAAVLLRPGGRFGIEHDDTHDEAV 267

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            R+  +      +    D  G  R     R
Sbjct: 268 PRLLAADGRYGSIVDHADLAGRPRFATATR 297


>gi|38704076|ref|NP_311241.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. Sakai]
 gi|168748186|ref|ZP_02773208.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|168755089|ref|ZP_02780096.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|168761225|ref|ZP_02786232.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767963|ref|ZP_02792970.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772937|ref|ZP_02797944.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|168780193|ref|ZP_02805200.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|168787244|ref|ZP_02812251.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|168798507|ref|ZP_02823514.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|195935710|ref|ZP_03081092.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. EC4024]
 gi|208809728|ref|ZP_03252065.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814004|ref|ZP_03255333.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208821799|ref|ZP_03262119.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400438|ref|YP_002271740.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217327637|ref|ZP_03443720.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254794223|ref|YP_003079060.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|261223215|ref|ZP_05937496.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259235|ref|ZP_05951768.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|187771349|gb|EDU35193.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4196]
 gi|188017230|gb|EDU55352.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002135|gb|EDU71121.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4076]
 gi|189357616|gb|EDU76035.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363009|gb|EDU81428.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4486]
 gi|189368252|gb|EDU86668.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4501]
 gi|189372815|gb|EDU91231.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC869]
 gi|189378909|gb|EDU97325.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC508]
 gi|208729529|gb|EDZ79130.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735281|gb|EDZ83968.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4045]
 gi|208741922|gb|EDZ89604.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4042]
 gi|209161838|gb|ACI39271.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. EC4115]
 gi|217320004|gb|EEC28429.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli O157:H7 str. TW14588]
 gi|254593623|gb|ACT72984.1| ribosomal protein L3 N5-glutamine methyltransferase [Escherichia
           coli O157:H7 str. TW14359]
 gi|320192045|gb|EFW66690.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. EC1212]
 gi|320641158|gb|EFX10637.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320646374|gb|EFX15297.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320651644|gb|EFX20024.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320657395|gb|EFX25197.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320662930|gb|EFX30254.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667674|gb|EFX34585.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326339683|gb|EGD63494.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. 1125]
 gi|326344145|gb|EGD67906.1| Ribosomal protein L3 methyltransferase [Escherichia coli O157:H7
           str. 1044]
          Length = 310

 Score =  211 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|59712413|ref|YP_205189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio fischeri ES114]
 gi|197335265|ref|YP_002156633.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio fischeri MJ11]
 gi|59480514|gb|AAW86301.1| N5-glutamine methyltransferase [Vibrio fischeri ES114]
 gi|197316755|gb|ACH66202.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio fischeri MJ11]
          Length = 310

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 96/225 (42%), Gaps = 8/225 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +VR +        +     F  +   +      PR     L+++ 
Sbjct: 65  ESRLTSTERLRIVERVVRRINERIPTAYLTNKAWFCGLEFFVDERVLVPRSPIAELIETQ 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G
Sbjct: 125 FEPWL----TEEPTRIMDLCTGSGCIAIACAHAFPNAEVDAIDISTDALMVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD    + +  ++ IVSNPPY++   ++ L  E  + +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLLRDIPKDQYNFIVSNPPYVDEEDMNSLPEEF-EHEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             R I      +L  +G    E+G N  V ++  +       +  
Sbjct: 240 LVRRILANAPDYLMDNGFLICEVG-NSMVHMMEQYPDIPFTWIEF 283


>gi|163789459|ref|ZP_02183898.1| hemK protein [Carnobacterium sp. AT7]
 gi|159875313|gb|EDP69378.1| hemK protein [Carnobacterium sp. AT7]
          Length = 282

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 8/256 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      S   V++  +  +    +  L   +        + +I+G+  FY+ +  
Sbjct: 28  AELLLRERQDWSKTDVMLHLNEEIPSEVKHQLLKDVSDHGSGIPVQQIVGYGWFYDRKFK 87

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ DT  PRPETE +VD  L  +         + +LD+GTGTG + + + KE P F    
Sbjct: 88  VTKDTLIPRPETEEIVDIFLKET----STNQKLTVLDIGTGTGIIGITIKKERPLFDVTA 143

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            D+S KAL++AK NA +     R   L+ D    V+   FDVI+SNPPYI +  V  +  
Sbjct: 144 TDLSSKALKVAKENAESLSAEVR--LLEGDLTEPVKKETFDVIISNPPYISTDEVGYMDE 201

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
            V  ++P ++L    +GL+ Y+ +A      LN  G   +EIG+ Q   V  IF+     
Sbjct: 202 SVLHYEPHLALFAENNGLAIYQRLAKETPAILNPGGEILLEIGFKQGKSVQEIFQQAFPK 261

Query: 245 FLVNAFKDYGGNDRVL 260
             V   KD  GNDR++
Sbjct: 262 AEVAIGKDMSGNDRLI 277


>gi|320178695|gb|EFW53658.1| Ribosomal protein L3 methyltransferase [Shigella boydii ATCC 9905]
          Length = 310

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  + ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMIHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|60593723|pdb|1VQ1|A Chain A, Crystal Structure Of N5-Glutamine Methyltransferase,
           Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At
           2.80 A Resolution
 gi|60593724|pdb|1VQ1|B Chain B, Crystal Structure Of N5-Glutamine Methyltransferase,
           Hemk(Ec 2.1.1.-) (Tm0488) From Thermotoga Maritima At
           2.80 A Resolution
          Length = 294

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ +    + RV G+    + +  D  +   +   +   + +      +H ILG ++F  
Sbjct: 44  SVLEVLLIVSRVLGIRKEDLFL-KDLGVSPTEEKRILELVEKRASGYPLHYILGEKEFXG 102

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +    F PRPETE      +  +L  I K  +  + D+GTG+GA+ +++ K     
Sbjct: 103 LSFLVEEGVFVPRPETE----ELVELALELIRKYGIKTVADIGTGSGAIGVSVAK-FSDA 157

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---DVIVSNPPYIESVI 179
                D+S KA+EIA+ NA  +GVS+RF   + ++    +  F   + I+SNPPY++S  
Sbjct: 158 IVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEXILSNPPYVKSS- 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  +V  F+P  +L GG DGL  YR       R+     +   EIG +Q  ++ +I 
Sbjct: 217 -AHLPKDVL-FEPPEALFGGEDGLDFYREFF---GRYDTSGKIVLXEIGEDQVEELKKI- 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +      KD  G  R LL  R
Sbjct: 271 ----VSDTVFLKDSAGKYRFLLLNR 291


>gi|15642117|ref|NP_231749.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121586816|ref|ZP_01676598.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
 gi|121727216|ref|ZP_01680383.1| adenine-specific methylase, putative [Vibrio cholerae V52]
 gi|147673603|ref|YP_001217639.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae O395]
 gi|153213246|ref|ZP_01948658.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
 gi|153803027|ref|ZP_01957613.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
 gi|153818977|ref|ZP_01971644.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
 gi|153822882|ref|ZP_01975549.1| adenine-specific methylase, putative [Vibrio cholerae B33]
 gi|153825591|ref|ZP_01978258.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
 gi|153828601|ref|ZP_01981268.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
 gi|227082243|ref|YP_002810794.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
 gi|229507797|ref|ZP_04397302.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
 gi|229511966|ref|ZP_04401445.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
 gi|229513769|ref|ZP_04403231.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
 gi|229519102|ref|ZP_04408545.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
 gi|229524120|ref|ZP_04413525.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
           VL426]
 gi|229528870|ref|ZP_04418260.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
 gi|229607342|ref|YP_002877990.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MJ-1236]
 gi|254226355|ref|ZP_04919944.1| adenine-specific methylase, putative [Vibrio cholerae V51]
 gi|254291354|ref|ZP_04962147.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
 gi|254849203|ref|ZP_05238553.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MO10]
 gi|298497860|ref|ZP_07007667.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
           L3-specific [Vibrio cholerae MAK 757]
 gi|18203198|sp|Q9KQ83|Y2118_VIBCH RecName: Full=Uncharacterized adenine-specific methylase VC_2118
 gi|9656668|gb|AAF95263.1| adenine-specific methylase, putative [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121548983|gb|EAX59022.1| adenine-specific methylase, putative [Vibrio cholerae 2740-80]
 gi|121630461|gb|EAX62854.1| adenine-specific methylase, putative [Vibrio cholerae V52]
 gi|124116046|gb|EAY34866.1| adenine-specific methylase, putative [Vibrio cholerae 1587]
 gi|124121425|gb|EAY40168.1| adenine-specific methylase, putative [Vibrio cholerae MZO-3]
 gi|125621105|gb|EAZ49450.1| adenine-specific methylase, putative [Vibrio cholerae V51]
 gi|126510472|gb|EAZ73066.1| adenine-specific methylase, putative [Vibrio cholerae NCTC 8457]
 gi|126519578|gb|EAZ76801.1| adenine-specific methylase, putative [Vibrio cholerae B33]
 gi|146315486|gb|ABQ20025.1| putative adenine-specific methylase [Vibrio cholerae O395]
 gi|148875872|gb|EDL74007.1| putative adenine-specific methylase [Vibrio cholerae 623-39]
 gi|149740742|gb|EDM54841.1| adenine-specific methylase, putative [Vibrio cholerae MZO-2]
 gi|150422684|gb|EDN14638.1| adenine-specific methylase, putative [Vibrio cholerae AM-19226]
 gi|227010131|gb|ACP06343.1| putative adenine-specific methylase [Vibrio cholerae M66-2]
 gi|227014014|gb|ACP10224.1| putative adenine-specific methylase [Vibrio cholerae O395]
 gi|229332644|gb|EEN98130.1| hypothetical protein VCG_001960 [Vibrio cholerae 12129(1)]
 gi|229337701|gb|EEO02718.1| hypothetical protein VCA_001704 [Vibrio cholerae bv. albensis
           VL426]
 gi|229343791|gb|EEO08766.1| hypothetical protein VCC_003130 [Vibrio cholerae RC9]
 gi|229348950|gb|EEO13907.1| hypothetical protein VCB_001414 [Vibrio cholerae TMA 21]
 gi|229351931|gb|EEO16872.1| hypothetical protein VCE_003376 [Vibrio cholerae B33]
 gi|229355302|gb|EEO20223.1| hypothetical protein VCF_003026 [Vibrio cholerae BX 330286]
 gi|229369997|gb|ACQ60420.1| hypothetical protein VCD_002253 [Vibrio cholerae MJ-1236]
 gi|254844908|gb|EET23322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio cholerae MO10]
 gi|297542193|gb|EFH78243.1| protein-(glutamine-N5) methyltransferase, LSU ribosomal protein
           L3-specific [Vibrio cholerae MAK 757]
          Length = 314

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   + S    PR     L+ +   
Sbjct: 71  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFE 130

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ 
Sbjct: 131 PWL----TEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLE 186

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 187 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 245

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 246 RRILANAPLYLKENGILVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 299


>gi|317009682|gb|ADU80262.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori India7]
          Length = 276

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +    D  L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHADLELNHEEEVRFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S KALE+A  N     + ER    Q+  +  +     +++SNPPYI       L 
Sbjct: 139 FASDVSLKALEVASKNIERFCLKERVFLKQTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIILLAAGLKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|256833003|ref|YP_003161730.1| modification methylase, HemK family [Jonesia denitrificans DSM
           20603]
 gi|256686534|gb|ACV09427.1| modification methylase, HemK family [Jonesia denitrificans DSM
           20603]
          Length = 318

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 26/284 (9%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVL-----------DDRQRFFLTNAIVRSLKHES 50
           QA  D+   +  VTG     ++     VL                  LT    R    E 
Sbjct: 32  QASVDALLLVEHVTGHDRSDILRH--RVLRTPVGDLTGRDSSTALTALTQLAQRREHREP 89

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G   F  + L + +  F PRPETELL + A+  +           ++DL TG+GA
Sbjct: 90  LQHLTGIAYFRRLSLEVGAGVFIPRPETELLAEHAITEAHRIAANGTQPVVVDLCTGSGA 149

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDV 167
           + LA+  E P  +   V++   A   A  N   +  ++     Q D  +++       D+
Sbjct: 150 IALAIATEVPSAQVYAVELDQGAYTWATRN--NHRYADPVHLTQGDARTALSHMAARVDI 207

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +VSNPPYI S  +     EV   DP ++L G G DGL   R +    +  L   GL  +E
Sbjct: 208 VVSNPPYIPSDAIPR-DHEVAHHDPAVALYGLGDDGLEVPRGVTMNAALLLRPQGLYVME 266

Query: 227 IGYNQKVDVVRIFE------SRKLFLVNAFKDYGGNDRVLLFCR 264
              +Q      + +           L     D  G  R++   R
Sbjct: 267 HADSQADAARAMVDGTTLGGDAAFTLAKTHADLTGRPRMVSARR 310


>gi|81300672|ref|YP_400880.1| HemK family modification methylase [Synechococcus elongatus PCC
           7942]
 gi|81169553|gb|ABB57893.1| modification methylase, HemK family [Synechococcus elongatus PCC
           7942]
          Length = 293

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 122/264 (46%), Gaps = 8/264 (3%)

Query: 4   LRDSHSFLCRVTGLS-SHQVIVDPDSVLDDR-QRFFLTNAIVRSL-KHESIHRILGWRDF 60
            ++    L  V G+    Q    P   L+ R     + +   + + +   +  + G   +
Sbjct: 25  RQELDWLLREVAGVPLERQRWAAPGDRLELRCPLAAIADLWQQRIRQRCPVQYLAGHAPW 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +S     PRPETEL++D A+A+S      R      DLGTG+GA+ +AL +  P
Sbjct: 85  RDLELQVSPAVLIPRPETELIIDLAIAWS-QAEPARQTGFWADLGTGSGAIAIALARALP 143

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
               + VD+S +AL IA++NA   G+S+R    Q  W   +    G    I+SNPPYI +
Sbjct: 144 QITVLAVDVSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPPYIPT 203

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L  EVRD +PR +L+ G DGL   R +A     +L   GL   E    Q   V  
Sbjct: 204 QEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQSTAVTA 263

Query: 238 IFESR-KLFLVNAFKDYGGNDRVL 260
           +  +      + + +D  G DR +
Sbjct: 264 LLAAIPGYSEIQSHRDLAGRDRFV 287


>gi|125987041|ref|XP_001357283.1| GA21859 [Drosophila pseudoobscura pseudoobscura]
 gi|54645614|gb|EAL34352.1| GA21859 [Drosophila pseudoobscura pseudoobscura]
          Length = 331

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 15/262 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  +   +  D +Q       +        +  I+G  DF ++ L  +
Sbjct: 69  IVSHVLKRKFNTVPDNFSQLHFDQKQLADFERFLEARCARMPLQHIIGEWDFLDITLKTA 128

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       +    V +L++G G+GA+ L++L   P  +   ++
Sbjct: 129 PTVFIPRPETEEFVRLVIE----NYKDVKHVNMLEVGCGSGAMSLSMLHALPRVEATAIE 184

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ +RF                  +  +D+I+SNPPY+++    
Sbjct: 185 RSKAATVLAAENAKLLGLQDRFQVHNHTMEEDQYMPEPLKDKKYDLIISNPPYVKTEEFQ 244

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE- 240
            L  EV  ++   +LDGG DGL   R + D   RHL+  G   +E+G      V  I   
Sbjct: 245 FLHPEVVVYENLNALDGGSDGLRVARLVFDLACRHLHSGGKLWLELGNEHPPLVKTIMHL 304

Query: 241 --SRKLFLVNAFKDYGGNDRVL 260
               +L  V ++ D    +R +
Sbjct: 305 KYEGRLNFVGSYYDQYKRERFV 326


>gi|301156164|emb|CBW15635.1| N5-glutamine methyltransferase [Haemophilus parainfluenzae T3T1]
          Length = 314

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F  +   +   T  PR     L+  
Sbjct: 73  FNSKLTHSEKETLVQLVLSRIEQRVPVAYLTNSAWFCGLEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
             A  L    K +  RILDL TG+G + +A  +  P  +   VD+S  AL +A+ N   +
Sbjct: 133 KFAPLL----KSEPKRILDLCTGSGCIAIATAEAFPEAEVDAVDLSVDALNVAEINIARH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QSD F ++ G  +D+IV+NPPY++   +  +  E   ++P ++L  G+DGL
Sbjct: 189 QLEHRVFPIQSDLFQNLFGQQYDLIVTNPPYVDEEDLADMPEEF-HYEPELALGSGVDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
              + I      +L ++G+   E+G N  V ++  +       V 
Sbjct: 248 EITKQILKQAPDYLTQNGMLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|171741091|ref|ZP_02916898.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC
           27678]
 gi|171276705|gb|EDT44366.1| hypothetical protein BIFDEN_00157 [Bifidobacterium dentium ATCC
           27678]
          Length = 317

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 32/283 (11%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-------------IVDPDSVLDDRQRFFLTNAIVRSLKHE 49
              D+        G+    V               DP   L+          I R  + E
Sbjct: 39  PEHDAKLLCAEAFGVDLQSVNKAMLLGDGLLGLAEDPVKPLEA-----FHAMIDRRARRE 93

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   F  + L +    F PRPETEL+V   + +           R++DL  G+G
Sbjct: 94  PLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDWITRNGGYH--ARVVDLCAGSG 151

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LA++ E P  +   V+ S +  E  + N           + N   E  D  Q     
Sbjct: 152 AIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEIGDATQMPTLH 211

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I     + L 
Sbjct: 212 QLDGTIDIVLTNPPYVPLSEIPE-QPEVRDYDPDMALYGGSADGTLIPERIILRAGKLLR 270

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             GL  +E   +Q   +     +          DY G  R L+
Sbjct: 271 PGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313


>gi|296104016|ref|YP_003614162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295058475|gb|ADF63213.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 310

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     +     R    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFEGLI----NRQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPTLQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGSDGLKLTRRILACAPDYLTDDGVLICEVG-NSMVHLIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|222034086|emb|CAP76827.1| Uncharacterized adenine-specific methylase yfcB [Escherichia coli
           LF82]
 gi|312946949|gb|ADR27776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 310

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|325496630|gb|EGC94489.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ECD227]
          Length = 310

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDDR 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|297243817|ref|ZP_06927747.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis AMD]
 gi|296888238|gb|EFH26980.1| methylase of polypeptide chain release factors [Gardnerella
           vaginalis AMD]
          Length = 332

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 26/285 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           A  D+   L +  G+S  ++    I+   +          ++ + R    E +  I+G  
Sbjct: 23  AEYDARLLLAKACGISLAELNKALILGDLTDFSLDYASEYSDFVSRRASREPLQHIVGRA 82

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +    F PRPETE++VD+ L +   R        ++DL  G+GA+ L++  E
Sbjct: 83  PFRYLDLRIGKGVFVPRPETEVVVDAGLDWL--RESHISKPTVVDLCAGSGAIGLSIATE 140

Query: 119 SPFFKGVGVDISCKALEIAKSN---AVTNGVSERFDTLQSDWFS---------------S 160
               +   V+ S +A +  + N      N  + +  +      +               +
Sbjct: 141 VADAQVWAVEKSPEAFQYLRKNFEETAKNYENMQISSRYHAVLADATKAHISDLTPELHA 200

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNK 219
           + G  D++++NPPY+    V    +EVR++DP ++L GG  DGL     I       L  
Sbjct: 201 ICGKVDLVITNPPYVPENQVPE-QIEVREYDPPLALYGGSVDGLLIPEQIMRAAFALLKP 259

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            G   +E   +Q   + +  ES          D  G  R     +
Sbjct: 260 GGAMVMEHDISQGDALKKYAESLGFACTRVGNDLTGRPRYTFAQK 304


>gi|229522071|ref|ZP_04411488.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
 gi|229340996|gb|EEO06001.1| hypothetical protein VIF_002616 [Vibrio cholerae TM 11079-80]
          Length = 314

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   + S    PR     L+ +   
Sbjct: 71  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDSRVLVPRSPIGELIQNRFE 130

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G+ 
Sbjct: 131 PWL----TEEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALNVAEQNIQDHGLE 186

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 187 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 245

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 246 RRILANAPLYLKENGILVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 299


>gi|170720621|ref|YP_001748309.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas putida W619]
 gi|169758624|gb|ACA71940.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas putida W619]
          Length = 302

 Score =  211 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 8/252 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGAVHLPWEIADSYLDCQLEDDERVRLQHLLKRRIEDRVPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +   +  P
Sbjct: 93  CGMSFIVDERVLVPRSPIGELIEKRFEPWL----ANEPARILDLCTGSGCIGIVAAEVFP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +G+ ER  T+Q D F+ + G  FD+I+SNPPY+++  
Sbjct: 149 EAEVVLADLSFEALEVANQNIERHGLDERVYTVQGDGFAGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL++ GL  VE+G +Q V V  ++
Sbjct: 209 FGDMPAEY-HHEPEMGLACGNDGLDLVRRMLAEAAEHLSEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFK 251
                  ++  +
Sbjct: 267 PEVDFAWLDFER 278


>gi|313651155|gb|EFS15554.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2a str. 2457T]
 gi|332755380|gb|EGJ85744.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-671]
 gi|332756543|gb|EGJ86894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2747-71]
 gi|332766150|gb|EGJ96360.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri 2930-71]
 gi|333016296|gb|EGK35627.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-304]
          Length = 310

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|229591758|ref|YP_002873877.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas fluorescens SBW25]
 gi|229363624|emb|CAY50950.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 302

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L++ +   +   + R +        +L    F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCNLEEEEISHVQRLLHRRIHERVPTAYLLKEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+++     L +       RILDL TG+G + +A   E  
Sbjct: 93  CGMSFIVDERVLIPRSPIGELIENRFEPWLAQ----PPARILDLCTGSGCIGIACAYEFQ 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S +ALE+A  N   +GV ER  T+Q D F  + G  FD+IVSNPPY+++  
Sbjct: 149 DAEVVLGDLSFEALEVANQNIERHGVDERVYTVQGDGFDGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL+  R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FADMPDEY-QHEPELGLACGDDGLNLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  ++  +  GG+
Sbjct: 267 PEVDFAWLDFQR--GGH 281


>gi|191169919|ref|ZP_03031473.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli F11]
 gi|300986871|ref|ZP_07177853.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 200-1]
 gi|331647987|ref|ZP_08349079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M605]
 gi|190909435|gb|EDV69020.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli F11]
 gi|281179417|dbj|BAI55747.1| putative adenine-specific methylase [Escherichia coli SE15]
 gi|300306360|gb|EFJ60880.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 200-1]
 gi|324015380|gb|EGB84599.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 60-1]
 gi|330912149|gb|EGH40659.1| ribosomal protein L3 methyltransferase [Escherichia coli AA86]
 gi|331043711|gb|EGI15849.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli M605]
          Length = 310

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|261209854|ref|ZP_05924155.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
 gi|260841040|gb|EEX67565.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC341]
          Length = 310

 Score =  211 bits (539), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDQRVLVPRSPIGELIQNRFE 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 127 PWLI----EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISADALQVAEQNIQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 242 RRILANAPLYLKENGVLVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|227887390|ref|ZP_04005195.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia
           coli 83972]
 gi|300983554|ref|ZP_07176648.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 45-1]
 gi|301049089|ref|ZP_07196073.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 185-1]
 gi|227835740|gb|EEJ46206.1| site-specific DNA-methyltransferase (adenine-specific) [Escherichia
           coli 83972]
 gi|300299136|gb|EFJ55521.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 185-1]
 gi|300408516|gb|EFJ92054.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 45-1]
 gi|307554392|gb|ADN47167.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli ABU 83972]
 gi|315292263|gb|EFU51615.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 153-1]
          Length = 310

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|326328817|ref|ZP_08195153.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
 gi|325953439|gb|EGD45443.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Nocardioidaceae bacterium Broad-1]
          Length = 273

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 62/228 (27%), Positives = 104/228 (45%), Gaps = 15/228 (6%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D+ +  ++R      +VR +  E +  ILGW +F  +R+ ++   F PR  + L+V+   
Sbjct: 46  DAPVSPQER---EAMVVRRVAGEPLELILGWAEFCGLRIRVAPGVFVPRQRSGLVVELVE 102

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 +      ++LDL  GTGA+  A+    P  +    DI   A+E A++N  + G 
Sbjct: 103 TTLRGTV----APKVLDLCCGTGALGAAVAVRRPDVRMWATDIDPAAVECARANLSSGG- 157

Query: 147 SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                 L  D +  +     FDVIV+N PY+ S  +  +  E RD +  ++LDGG DGL 
Sbjct: 158 ----QVLLGDLYDPLPHDLAFDVIVANAPYVPSDQIRNMPPEARDHEHHVALDGGADGLD 213

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             R + +   +HL   G+  +E G  Q      +  ++ L       D
Sbjct: 214 VQRRVIEQAPKHLAPGGVLVIEAGQEQAPVTASLMRAQGLV-AEVHHD 260


>gi|206577308|ref|YP_002237272.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Klebsiella pneumoniae 342]
 gi|238895851|ref|YP_002920587.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae NTUH-K2044]
 gi|288934208|ref|YP_003438267.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Klebsiella variicola At-22]
 gi|206566366|gb|ACI08142.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Klebsiella pneumoniae 342]
 gi|238548169|dbj|BAH64520.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|288888937|gb|ADC57255.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Klebsiella variicola At-22]
          Length = 310

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNQFAGLI----NHKPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N  ++G+      ++SD F  +    +D+IV+NPPY++   +  L  E  +
Sbjct: 166 PDALAVAEHNVESHGLIHHVTPIRSDLFRDLPKLQYDLIVTNPPYVDEEDMADLPEEY-E 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPVLGLASGSDGLKLTRRILGNAPDYLSDDGILICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|113868049|ref|YP_726538.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia eutropha H16]
 gi|113526825|emb|CAJ93170.1| predicted methyltransferase [Ralstonia eutropha H16]
          Length = 297

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R +        I      
Sbjct: 34  NAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEVDTVLKVIERRVNERVPAAYITHEAFM 93

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  + S    PR     L+   L   +   E   +  +L+L TG+G + +      P
Sbjct: 94  HGLRFYVDSRVIVPRSFIGELLQDGLEPWVG--ETDSIGPVLELCTGSGCLPIVAAHVWP 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             K   VDIS  AL +A+ N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 152 NAKIDAVDISPDALAVARRNVADYKMDDRIRLYEGDLYAPLPHGATYDVILTNPPYVNEG 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PRI+L GG DG+   R I  G   HLN  G+  VEIG     +V   
Sbjct: 212 SMQALPPEYLA-EPRIALAGGDDGMDVVRRIIAGAKAHLNPGGVLVVEIGNEHA-NVEAA 269

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F       +       G+++V L  
Sbjct: 270 FPEL---EIVWLPVSAGDEQVFLLT 291


>gi|73541585|ref|YP_296105.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia eutropha JMP134]
 gi|72118998|gb|AAZ61261.1| Modification methylase HemK [Ralstonia eutropha JMP134]
          Length = 297

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 104/265 (39%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R +        I      
Sbjct: 34  NAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEIDAVMRVIDRRVNERVPAAYITHEAYM 93

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  + S    PR     L+   L   +    +     +L+L TG+G + +      P
Sbjct: 94  HGLRFYVDSRVIVPRSFIGELLQEGLEPWIGETSQVGP--VLELCTGSGCLPIIAAHVWP 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
             +   VDIS  AL +A+ N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 152 NAQIDAVDISPDALAVARRNVADYKMQDRIHLFEGDLYAPLPAGATYDVILTNPPYVNES 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PR++L GG DG+   R I  G    LN  G+  VEIG     +V   
Sbjct: 212 SMQALPPEYLA-EPRVALAGGDDGMDVVRRIIAGAKARLNPGGVLVVEIGNEHA-NVEAA 269

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F +     +       G+++V L  
Sbjct: 270 FPNL---EIVWLPVSAGDEQVFLLT 291


>gi|260776468|ref|ZP_05885363.1| hypothetical adenine-specific methylase yfcB [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260607691|gb|EEX33956.1| hypothetical adenine-specific methylase yfcB [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 310

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTSSERLRIVERVVKRINERTPTAYLTNRAWFCGLEFFVDERVLVPRSPIGELIQAE 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G
Sbjct: 125 FQPWLI----EEPTRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNVQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEKYNLIVSNPPYVDQEDMNSLPDEF-THEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L ++G+   E+G N  V ++  +       +      GG+  V +  R
Sbjct: 240 LVRRILANAPDYLTENGILICEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFMLTR 295


>gi|306823421|ref|ZP_07456796.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium
           ATCC 27679]
 gi|304553128|gb|EFM41040.1| protein-(glutamine-N5) methyltransferase [Bifidobacterium dentium
           ATCC 27679]
          Length = 317

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 32/283 (11%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-------------IVDPDSVLDDRQRFFLTNAIVRSLKHE 49
              D+        G+    V               DP   L+          I R  + E
Sbjct: 39  PEHDAKLLCAEAFGVDLQSVNKAMLLGDGLLGLAEDPVKPLEA-----FHAMIDRRARRE 93

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   F  + L +    F PRPETEL+V   + +           R++DL  G+G
Sbjct: 94  PLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDWITRNGGYH--ARVVDLCAGSG 151

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LA++ E P  +   V+ S +  E  + N           + N   E  D  Q     
Sbjct: 152 AIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEIGDATQMPTLH 211

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I     + L 
Sbjct: 212 QLDGTIDIVLTNPPYVPLSEIPE-QPEVRDYDPDMALYGGSADGTLIPERIILRAGKLLR 270

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             GL  +E   +Q   +     +          DY G  R L+
Sbjct: 271 PGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 313


>gi|254821299|ref|ZP_05226300.1| modification methylase, HemK family protein [Mycobacterium
           intracellulare ATCC 13950]
          Length = 308

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 117/268 (43%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G+   ++ +  DS  +D       +A+    +   +  +LG   F  
Sbjct: 29  ARWDAEQLAAHLAGIDRGRLAL-LDSPGEDF-LGRYRDAVAVRSRRVPLQHLLGTAAFGP 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V+L +    F PRPETE L++ A A  L          I+DL TG+GA+ +AL  +    
Sbjct: 87  VQLRVGPGVFIPRPETEALLEWARAQRLA-----PRPVIVDLCTGSGALAVALAHQRAEL 141

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + V +D S  ALE A+ NA    +   R D  +      ++G  D+IV+NPPY+  
Sbjct: 142 GQEARIVALDNSDAALEYARGNAEGTAIEIVRADVTEPGVLPQLDGRVDLIVANPPYVPD 201

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  ++ GG DGL+    I     R L   GL  +E       + + 
Sbjct: 202 GAV--LDPEVAQHDPYQAVFGGPDGLAVIAPIVRLAGRWLRPGGLIGIEHDDTTSRETME 259

Query: 238 IFESRKLF-LVNAFKDYGGNDRVLLFCR 264
           +F    LF  V A +D  G  R +   R
Sbjct: 260 LFVRTGLFEDVQARQDLTGRPRFVTARR 287


>gi|156933075|ref|YP_001436991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cronobacter sakazakii ATCC BAA-894]
 gi|156531329|gb|ABU76155.1| hypothetical protein ESA_00885 [Cronobacter sakazakii ATCC BAA-894]
          Length = 338

 Score =  211 bits (538), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 78  LPSLYLPLDIPEDMRTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 137

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +      +   ILD+ TG+G + +A     P  +   VDIS
Sbjct: 138 VLVPRSPIGELINNRFAGLIDH----EPQHILDMCTGSGCIAIACAYAFPNAEVDAVDIS 193

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 194 ADALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDIIVTNPPYVDEEDMSDLPNEYR- 252

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  +G+   E+G N  V ++  +       +  
Sbjct: 253 HEPELGLAAGSDGLKLARRILACSPDYLTDNGILICEVG-NSMVHLMEQYPDVPFTWLEF 311

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 312 --D-NGGDGVFMLTK 323


>gi|282859871|ref|ZP_06268959.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Prevotella bivia JCVIHMP010]
 gi|282587274|gb|EFB92491.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Prevotella bivia JCVIHMP010]
          Length = 285

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 4/260 (1%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L     LS   +++   + L   +   L   + R    E +  +LG  +F      +
Sbjct: 24  RMVLEEEFHLSFADILIGKVNELSQDETTKLAEIVCRLAASEPVQYVLGRENFAGRTFHV 83

Query: 68  SSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            S    PRPETE+LV          +  +     ++ILD+GTG+G + + L  +      
Sbjct: 84  ESGVLIPRPETEMLVQWIEEDYNTPVCGLLPPAPLQILDIGTGSGCIAITLALDILNSSV 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS  AL IA+ NA+  G    F    +    + +  +D+IVSNPPYI     + + 
Sbjct: 144 AAWDISGDALLIARDNALRLGAKVNFQLQDALSIEATDRCWDIIVSNPPYICEKECEAMA 203

Query: 185 LEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             V   +P  +L     D L  Y  IA    + L K G    E       +V  + +   
Sbjct: 204 ENVLQHEPHTALFVPNDDPLRFYTAIAKLGKKTLTKGGTLYFETNPLYIKEVKTMLKDLG 263

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
             ++   KD     R +   
Sbjct: 264 YTMIQLRKDQYDKQRFVKAT 283


>gi|104780703|ref|YP_607201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas entomophila L48]
 gi|95109690|emb|CAK14391.1| modification methylase [Pseudomonas entomophila L48]
          Length = 302

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 10/257 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +R  L + + R ++       +LG   F
Sbjct: 33  NAWDEARLLVLGSVHLPWEVADSYLDCQLEDDERVRLQHLLKRRIEERVPTAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L++      L      +  RILDL TG+G + +       
Sbjct: 93  CGMSFIVDERVLVPRSPIGELIEKRFEPWLAT----EPARILDLCTGSGCIGIVAADVFQ 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+I+SNPPY+++  
Sbjct: 149 DAEVVLADLSFAALEVANQNIERHGLEQRVYTVQGDGFGGLPGQRFDLILSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D +  E    +P + L  G DGL   R +    + HL + GL  VE+G +Q V V  ++
Sbjct: 209 FDDMPAEY-HHEPELGLACGNDGLDLVRRMLAEAADHLTEKGLLIVEVGNSQ-VHVEALY 266

Query: 240 ESRKLFLVNAFKDYGGN 256
                  +   +  GG+
Sbjct: 267 PEVDFAWLEFER--GGH 281


>gi|193069730|ref|ZP_03050681.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E110019]
 gi|192956932|gb|EDV87384.1| ribosomal large subunit L3 protein glutamine methyltransferase
           [Escherichia coli E110019]
          Length = 310

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPESEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|296454710|ref|YP_003661853.1| HemK family modification methylase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184141|gb|ADH01023.1| modification methylase, HemK family [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 313

 Score =  211 bits (538), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
                  + R  K E +  I G   F  + L +    F PRPETE +V + L +      
Sbjct: 76  LAAFHAMLSRRAKREPLQYITGHTPFRYLDLQVGPGVFIPRPETETVVQAGLDWLTRHSM 135

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTN 144
                R++DL  G+GA+ L+++ E P  +   V++S +  E  + N            +N
Sbjct: 136 IHP--RMVDLCAGSGAIGLSIVSEVPGSQVWAVELSPRTAEWTRRNLAVTAKRYPSIASN 193

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGL 203
              E  D       + ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG 
Sbjct: 194 YQLEVADATSLATLAQLDGTIDIVITNPPYVPQTDIPE-QPEVRDWDPELALYGGSADGT 252

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
                I +   R L   G+  +E    Q   +V   ++      +  KD+ G DR L   
Sbjct: 253 LIPERIIERAWRLLKPGGVLVMEHDLTQGERLVAYAKATGFATASTGKDWTGRDRYLFAE 312

Query: 264 R 264
           +
Sbjct: 313 K 313


>gi|313812712|gb|EFS50426.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL025PA1]
          Length = 291

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLIRVASVNADDEDR--FNQMVDRRRSGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D          FDV+V+NPPY+     
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDSRRFDVVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|260582130|ref|ZP_05849924.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae NT127]
 gi|260094762|gb|EEW78656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae NT127]
          Length = 314

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTSSEKETLVQLVLTRIEQRIPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFTWVE 291


>gi|313764217|gb|EFS35581.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL013PA1]
 gi|313816310|gb|EFS54024.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL059PA1]
 gi|313827396|gb|EFS65110.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL063PA2]
 gi|314915695|gb|EFS79526.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL005PA4]
 gi|314917936|gb|EFS81767.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA1]
 gi|314920319|gb|EFS84150.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA3]
 gi|314931539|gb|EFS95370.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL067PA1]
 gi|314957924|gb|EFT02027.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL002PA1]
 gi|314967572|gb|EFT11671.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL037PA1]
 gi|315098770|gb|EFT70746.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL059PA2]
 gi|315101460|gb|EFT73436.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL046PA1]
 gi|315108752|gb|EFT80728.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL030PA2]
 gi|327329873|gb|EGE71627.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL097PA1]
 gi|327450546|gb|EGE97200.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA3]
 gi|327454115|gb|EGF00770.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL083PA2]
 gi|328753198|gb|EGF66814.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL025PA2]
 gi|328753963|gb|EGF67579.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL087PA1]
          Length = 291

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLIRVASVNADDEDR--FNQMVDRRRSGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D          FDV+V+NPPY+     
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDSRRFDVVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|52425320|ref|YP_088457.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mannheimia succiniciproducens MBEL55E]
 gi|52307372|gb|AAU37872.1| HemK protein [Mannheimia succiniciproducens MBEL55E]
          Length = 344

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LS   + +D    L         +   +   I R  K   +  +     F  +   +   
Sbjct: 87  LSGLDLPLDLPQELYNANLTQAEKETVINLVIKRLAKRLPVAYLTNSAWFCGLEFYVDER 146

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++        I  ++  RILD+ TG+G + +A  ++    +   VD+S
Sbjct: 147 VIIPRSPISALIEN----RFQGIIVKEPKRILDMCTGSGCIAIACAEQFKEAEVDAVDLS 202

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N     +SER   +QSD F +V    +D+IVSNPPY++   +  +  E   
Sbjct: 203 IDALNVAEINIDRYNLSERVFPIQSDLFDNVPADKYDLIVSNPPYVDREDLADMPEEF-H 261

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++P ++L  G+DGL+  + I    + +LN DG+   E+G N  + ++  +       V  
Sbjct: 262 YEPEMALGSGVDGLTITKQILANAANYLNDDGVLVCEVG-NSMIHLIEQYPDVPFNWVEL 320

Query: 250 FKDYGGNDRVLLFCR 264
                G   V +  +
Sbjct: 321 R---NGGVGVFVLTK 332


>gi|262276348|ref|ZP_06054157.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
           CIP 101886]
 gi|262220156|gb|EEY71472.1| hypothetical adenine-specific methylase yfcB [Grimontia hollisae
           CIP 101886]
          Length = 310

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 8/222 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+ +    
Sbjct: 68  LTTSERLRIVERVMRRINDRTPVAYLTNKAYFCGLEFYVDERVLVPRSPIGELIQNQFRP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L      +  RI+DL TG+G + +A     P  +   VDIS  ALE+A+ N   +G+ +
Sbjct: 128 MLEV----EPTRIMDLCTGSGCIGIACAYAFPDAEVDLVDISSDALEVAEMNVQEHGLEQ 183

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  + +  +D+IVSNPPY++   ++ L  E R  +P + L  G DGL   R
Sbjct: 184 QVFPIRSDLFRDLPKDKYDLIVSNPPYVDEEDMNALPDEFR-HEPELGLAAGRDGLKLMR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            I      +L + G+   E+G N  V V   +    L  +  
Sbjct: 243 RIIANAPDYLTEQGILICEVG-NSMVHVQEQYPELPLTWLEF 283


>gi|283477747|emb|CAY73663.1| putative adenine-specific methylase [Erwinia pyrifoliae DSM 12163]
          Length = 310

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R + +   +  +     F      +      PR     L++   A 
Sbjct: 68  LTLSERQRIVERVIRRVDERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINQHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +
Sbjct: 128 IIGHQPQ----HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++ D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R
Sbjct: 184 HVTPIRCDLFRELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 243 RILGCAAEYLSEQGVLICEVG-NSMVHLIEQYPDVPFTWLEFE---NGGDGVFMLTR 295


>gi|197285660|ref|YP_002151532.1| methylase [Proteus mirabilis HI4320]
 gi|227356165|ref|ZP_03840554.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus
           mirabilis ATCC 29906]
 gi|194683147|emb|CAR43748.1| putative methylase [Proteus mirabilis HI4320]
 gi|227163629|gb|EEI48545.1| site-specific DNA-methyltransferase (adenine-specific) [Proteus
           mirabilis ATCC 29906]
          Length = 310

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   I  R  +   +  +     F      +      PR     L+++  A 
Sbjct: 68  LTTSEKMEIIQLIEVRIEQKIPVPYLTHRAWFCGHEFYVDERVLIPRSPIGELINNHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +     ++  RILDL TG+G + +A   E    +   VDIS  ALE+A+ N   +G+  
Sbjct: 128 LI----GQEPTRILDLCTGSGCIAIACAHEFQEAEVDAVDISADALEVAEFNIENHGLIH 183

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD F ++    +D+IV+NPPY+++  +  L  E    +P ++L  G+DGL   R
Sbjct: 184 RVYPMQSDLFEAIVPTPYDIIVTNPPYVDAEDMGDLPDEY-HIEPELALASGVDGLDITR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L++ G+   E+G N  V ++  F       +   K  GG   V +  R
Sbjct: 243 QILLKAPDYLSEKGILVCEVG-NSMVHLIEQFPEVPFTWLEFEK--GGIG-VFMLTR 295


>gi|333002700|gb|EGK22260.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-272]
 gi|333016583|gb|EGK35913.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella flexneri K-227]
          Length = 310

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      ++   +   +   I R  +   +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLISSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|258626193|ref|ZP_05721041.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262166219|ref|ZP_06033956.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
 gi|262170895|ref|ZP_06038573.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
           MB-451]
 gi|258581548|gb|EEW06449.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|261891971|gb|EEY37957.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus
           MB-451]
 gi|262025935|gb|EEY44603.1| hypothetical adenine-specific methylase yfcB [Vibrio mimicus VM223]
          Length = 310

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDQRVLVPRSPIGELIQNRFE 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 127 PWLI----EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 242 RRILANAPLYLKENGVLVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|192359208|ref|YP_001982421.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
 gi|190685373|gb|ACE83051.1| modification methylase, HemK family [Cellvibrio japonicus Ueda107]
          Length = 302

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 10/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVR 64
           ++   +     L+        D+ L   +R  +   + R ++       I G   F  + 
Sbjct: 39  EAEQLVLHAIHLTPPLANEWLDARLTRTERGRVLANLQRRIQERIPAAYITGRTWFAGLP 98

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L+       L +       RILDL TG+G + +A     P  + 
Sbjct: 99  FQVDERVLVPRSPIAELIQKRFEPWLIQ----SPERILDLCTGSGCIGIACAYMFPEAEV 154

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
              DIS  AL +A+ N   +G+ +R   LQSD F  ++G  FD+IVSNPPY+++  +  L
Sbjct: 155 QLSDISYDALAVAEQNIQMHGLEDRVFALQSDGFEHMQGQVFDLIVSNPPYVDAEDMAGL 214

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E R  +P + L  G+DGL   R +      HL + GL  VE+G +    + + +    
Sbjct: 215 PDEYRA-EPELGLASGVDGLDFTRQLLTCALDHLTEAGLLVVEVGNSW-PALAQAYPELP 272

Query: 244 LFLVNAFKDYGGNDRVLL 261
              V      GG+   +L
Sbjct: 273 FTWVEFEN--GGHGVFVL 288


>gi|255020173|ref|ZP_05292242.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus
           caldus ATCC 51756]
 gi|254970315|gb|EET27808.1| Hypothetical adenine-specific methylase yfcB [Acidithiobacillus
           caldus ATCC 51756]
          Length = 304

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 6/234 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA-IVRSLKHESIHRILGWRDFYNVR 64
           ++ + + R  GL    +      +L   +R  + +A   R +       ILG   F  +R
Sbjct: 44  EASALVARRLGLEPEDLPEVRQCLLTRAEREAILDAFYQREILRRPTAYILGEAWFAGLR 103

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR   E  ++   A   P ++   V RIL++GTG+G + +AL ++ P    
Sbjct: 104 FAVDERVLIPRSLLEPFIEEGFA---PWVQAERVRRILEIGTGSGCMAVALARQFPQASV 160

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             VDIS + LE+A  N   +G+ ER     SD FS+V    FD+IVSNPPY+++  +  L
Sbjct: 161 DAVDISPQVLELAAQNVRRHGLEERIRLYTSDIFSAVGPARFDLIVSNPPYVDAAAMADL 220

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             E R  +PR++L  G DGL     + D    HL   G   VE G  +   + R
Sbjct: 221 PPEYR-HEPRLALAAGEDGLDCILPLLDQAPDHLLPGGALVVETGDAEHALLAR 273


>gi|118465310|ref|YP_880756.1| modification methylase, HemK family protein [Mycobacterium avium
           104]
 gi|254774339|ref|ZP_05215855.1| modification methylase, HemK family protein [Mycobacterium avium
           subsp. avium ATCC 25291]
 gi|118166597|gb|ABK67494.1| modification methylase, HemK family protein [Mycobacterium avium
           104]
          Length = 312

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/274 (29%), Positives = 120/274 (43%), Gaps = 23/274 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF--LTNAIVRSLKHESIHRILGWRDF 60
           A  D+      + G+   ++ +    +    Q FF    +A++   +   +  +LG   F
Sbjct: 29  ARWDAEQLAAHLAGVDRGRLGL----LESPGQEFFQRYRDAVLARARRVPLQHLLGTAAF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             V L +    F PRPETE L++ A A  LP         I+DL TG+GA+ +AL     
Sbjct: 85  GPVLLHVGPGVFVPRPETEALLEWATAQQLP-----PRPVIVDLCTGSGALAVALAHHRA 139

Query: 121 F----FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ----SDWFSSVEGLFDVIVSN 171
                 + VGVD S  ALE A+ NA    V   R D ++          ++G  D++V+N
Sbjct: 140 GRGLPARIVGVDNSDAALEYARRNAAGTTVELVRADVIELARVPGSAPDLDGRVDLVVAN 199

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+    V  L  EV   DP  ++ GG DGL+    + +   R L   GL  +E     
Sbjct: 200 PPYVPDGAV--LEPEVAQHDPHHAVFGGPDGLAVIAPVVELAGRWLRPGGLIGIEHDDTT 257

Query: 232 KVDVVRIFESRKLF-LVNAFKDYGGNDRVLLFCR 264
               V +F+   LF  V A +D  G  R +   R
Sbjct: 258 SHQTVELFDRTGLFDDVRAHRDLTGRPRFVTARR 291


>gi|261839806|gb|ACX99571.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori 52]
          Length = 276

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEACFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDV----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GGI G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGIKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|259907873|ref|YP_002648229.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96]
 gi|224963495|emb|CAX54983.1| Probable adenine-specific methylase [Erwinia pyrifoliae Ep1/96]
          Length = 292

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 102/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R + +   +  +     F      +      PR     L++   A 
Sbjct: 50  LTLSERQRIVERVIRRVDERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINQHFAG 109

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +
Sbjct: 110 IIGHQPQ----HILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQ 165

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++ D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R
Sbjct: 166 HVTPIRCDLFRELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLTR 224

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 225 RILGCAAEYLSEQGVLICEVG-NSMVHLIEQYPDVPFTWLEFE---NGGDGVFMLTR 277


>gi|167041536|gb|ABZ06285.1| putative RNA methylase family UPF0020 [uncultured marine
           microorganism HF4000_008B14]
          Length = 289

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 131/266 (49%), Gaps = 7/266 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  +S   +  V  +    +    +  ++ +Q   L   + R LK E +  IL +++FY
Sbjct: 22  DARLESEVMVMNVMRMPRQDLFSHQEDGVNAQQERELAQIVERRLKREPLAYILAYKEFY 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V L ++SD   PRPETE +V+ AL  +L  +E  ++V I D+GTGTGA+ + L    P 
Sbjct: 82  GVNLLVNSDVLIPRPETETMVEHALFMALMGMETTELV-IADVGTGTGAIAINLAIHLPA 140

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   +D +   L++A  N   + V++R    + D    +    D+IV+N PYI +  + 
Sbjct: 141 ARIYAIDAADAVLDVASHNIRAHNVADRIKLAKGDLLEPLPEPVDLIVANLPYIPTSRIP 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E+  ++P  +LDGG DGL   R +       L ++G+  +E+   Q   V  +  S
Sbjct: 201 TLQPEI-QWEPIAALDGGGDGLDLIRRLMSQAPDKLKENGIILLELDPEQVSAVEEL--S 257

Query: 242 RKLF---LVNAFKDYGGNDRVLLFCR 264
           R+LF     +  +D    DRV +  R
Sbjct: 258 RQLFPEATTSIEQDLAHLDRVFVINR 283


>gi|188533296|ref|YP_001907093.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
 gi|188028338|emb|CAO96199.1| Probable adenine-specific methylase [Erwinia tasmaniensis Et1/99]
          Length = 292

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 11/236 (4%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L +RQR  +   I R      +  +     F      +      PR     L+D   A  
Sbjct: 52  LSERQR-IVERVIRRVSDRTPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELIDRHFAGI 110

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +          ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ + 
Sbjct: 111 I----NHQPQHILDMCTGSGCIAIACAWAFPQAEVDAVDISDDALAVTEQNISAHGLEQH 166

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              ++SD F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R 
Sbjct: 167 VTPIRSDLFRELPKTQYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGNDGLTLARR 225

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 226 ILGCAADYLSEQGVLVCEVG-NSMVHLIDQYPDVPFTWLEFE---NGGDGVFMLTR 277


>gi|306814558|ref|ZP_07448720.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|305851952|gb|EFM52404.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
          Length = 310

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D GGN  V +  +
Sbjct: 284 --DNGGNG-VFMLTK 295


>gi|262404464|ref|ZP_06081019.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
 gi|262349496|gb|EEY98634.1| hypothetical adenine-specific methylase yfcB [Vibrio sp. RC586]
          Length = 310

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDQRVLVPRSPIGELIQNRFE 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 127 PWLI----EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLE 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 242 RRILANAPLYLKENGILVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|15602255|ref|NP_245327.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pasteurella multocida subsp. multocida str. Pm70]
 gi|18202826|sp|Q9CNN7|Y390_PASMU RecName: Full=Uncharacterized adenine-specific methylase PM0390
 gi|12720638|gb|AAK02474.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 338

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 7/217 (3%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
            +   L   I R  K   +  +     F  +   +      PR     L+    A  LP+
Sbjct: 104 EKEVLLRLIIQRLEKRIPVAYLTHQAWFCGLNFYVDERVIVPRSPISALIQEGFAPLLPQ 163

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
               +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + + +R   
Sbjct: 164 ----EPKRILDMCTGSGCIAIACAERFPEAEVDAVDLSSDALDVAQINIERHNMLDRVYP 219

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +QSD F  + +  +D+IV+NPPY++   +  +  E    +P ++L  G+DGL   + I  
Sbjct: 220 IQSDLFHDLAKDQYDLIVANPPYVDLEDLSDMPAEF-HHEPEMALGSGVDGLEITKKILY 278

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
               +L + G+   E+G N  V ++  +       V 
Sbjct: 279 AAPDYLTEQGVLVCEVG-NSMVHLIEQYPDVPFNWVE 314


>gi|325002821|ref|ZP_08123933.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudonocardia sp. P1]
          Length = 291

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 102/270 (37%), Gaps = 16/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V+G S   +++ P  ++D      L   + R    E +  ILG      
Sbjct: 25  PRVDAELLAAHVSGRSRSTLLLTP--LVDPGVVEELKVLVKRRAAREPLQHILGTAVLGP 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V + +    F PRPETELL +  L      +       +LDL TG+GA+ LA     P  
Sbjct: 83  VEVAVGPGVFTPRPETELLFEWGLG----ALRDVRRPVVLDLCTGSGALALAFAVSRPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTN-------GVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               ++    AL   + N   +             D    D    +EG  D++V NPPY+
Sbjct: 139 AVHALEADPAALVWTRRNLDAHVGRGGRPVTLHAADVRWPDLLVELEGRVDLVVCNPPYV 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  +  EV  +DP  ++ GG DG    + +  G +  L   G  ++E        V
Sbjct: 199 PDGTP--VPPEVERWDPPGAVFGGPDGTEIIQAVVRGATGWLRHGGALAIEHDDTHGDTV 256

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +   R+ L  V    D  G  R +   R
Sbjct: 257 PALLRRRRTLAEVTEHTDLTGRPRFVTARR 286


>gi|283455531|ref|YP_003360095.1| hemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium dentium Bd1]
 gi|283102165|gb|ADB09271.1| hemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium dentium Bd1]
          Length = 298

 Score =  210 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 32/283 (11%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-------------IVDPDSVLDDRQRFFLTNAIVRSLKHE 49
              D+        G+    V               DP   L+          I R  + E
Sbjct: 20  PEHDAKLLCAEAFGVDLQSVNKAMLLGDGLLGLAEDPVKPLEA-----FHAMIDRRARRE 74

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   F  + L +    F PRPETEL+V   + +           R++DL  G+G
Sbjct: 75  PLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDWITRNGGYH--ARVVDLCAGSG 132

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LA++ E P  +   V+ S +  E  + N           + N   E  D  Q     
Sbjct: 133 AIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETAQAHPSIIGNYHLEIGDATQMPTLH 192

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I     + L 
Sbjct: 193 QLDGTIDIVLTNPPYVPLSEIPE-QPEVRDYDPDMALYGGSADGTLIPERIILRAGKLLR 251

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             GL  +E   +Q   +     +          DY G  R L+
Sbjct: 252 PGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294


>gi|237732363|ref|ZP_04562844.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
 gi|226907902|gb|EEH93820.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter sp. 30_2]
          Length = 310

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNRFAGLI----NEQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F   ++  +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLLKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ +G+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGSDGLKLTRRILGNAPDYLSDNGILICEVG-NSMVHLIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|283786408|ref|YP_003366273.1| methylase [Citrobacter rodentium ICC168]
 gi|282949862|emb|CBG89485.1| putative methylase [Citrobacter rodentium ICC168]
          Length = 310

 Score =  210 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNRFAGLIS----EQPHHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ +G+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGSDGLKLTRRILGNAPDYLSDNGILICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
                G D V +  +
Sbjct: 284 N---NGGDGVFMLTK 295


>gi|56752240|ref|YP_172941.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301]
 gi|56687199|dbj|BAD80421.1| protoporphyrinogen IX oxidase [Synechococcus elongatus PCC 6301]
          Length = 293

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 8/264 (3%)

Query: 4   LRDSHSFLCRVTGLS-SHQVIVDPDSVLDDR-QRFFLTNAIVRSL-KHESIHRILGWRDF 60
            ++    L  V G+    Q    P   L+ R     + +   + + +   +  + G   +
Sbjct: 25  RQELDWLLREVAGVPLERQRWAAPGDRLELRCPLAAIADLWQQRIRQRCPVQYLAGHAPW 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +S     PRPETEL++D A+A+S      R      DLGTG+GA+ +AL +  P
Sbjct: 85  RDLELQVSPAVLIPRPETELIIDLAIAWS-QAEPARQTGFWADLGTGSGAIAIALARALP 143

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
               + VD S +AL IA++NA   G+S+R    Q  W   +    G    I+SNPPYI +
Sbjct: 144 QITVLAVDDSAEALAIARNNAARYGLSDRIRWYQGSWLVPLADYRGQLQAIISNPPYIPT 203

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L  EVRD +PR +L+ G DGL   R +A     +L   GL   E    Q   V  
Sbjct: 204 QEWQALEPEVRDHEPRQALESGPDGLEALRHLAQAAPDYLRSLGLWLCEHMAGQSTAVTA 263

Query: 238 IFESR-KLFLVNAFKDYGGNDRVL 260
           +  +      + + +D  G DR +
Sbjct: 264 LLAAIPGYSEIQSHRDLAGRDRFV 287


>gi|198284466|ref|YP_002220787.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665820|ref|YP_002427133.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198248987|gb|ACH84580.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518033|gb|ACK78619.1| modification methylase, HemK family [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 288

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 71/238 (29%), Positives = 109/238 (45%), Gaps = 11/238 (4%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
            +   Q   +   + + L    +   LG   FY + L +S +   PRP+TE LV  AL  
Sbjct: 59  PIPGDQGEQIVALLDQRLAGVPLAYCLGEWSFYGLDLRVSPEVLIPRPDTETLVTLALE- 117

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               + +   VR+LDLG G+GA+ LA+    P  +  GV+ S  AL +A++N     ++ 
Sbjct: 118 ---GLAEEGAVRVLDLGAGSGAIALAIALARPQAEVWGVEHSPAALRVARANGAL--LAS 172

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R   L+ DW++ ++G   FD IV+NPPY+               +PR +L  G  GL   
Sbjct: 173 RVHWLEGDWYAPLDGALRFDRIVANPPYLADDDPHLPD---LHHEPRDALVAGPRGLECL 229

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             I  G    L+  G+  +E G +Q   V R+  +  L  V    D  G +RV    R
Sbjct: 230 ERIIAGAYERLSTSGMLLLEHGPDQGAAVRRLLGNAGLCAVRTRCDLAGRERVSSGTR 287


>gi|145635050|ref|ZP_01790756.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA]
 gi|145267658|gb|EDK07656.1| N5-glutamine methyltransferase [Haemophilus influenzae PittAA]
          Length = 314

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   N
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRN 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFKWVE 291


>gi|308062349|gb|ADO04237.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Cuz20]
          Length = 276

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEARFFELVEKRLNDCPIEYLLESCDFYGHS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLVSNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAALKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|309782153|ref|ZP_07676883.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia sp. 5_7_47FAA]
 gi|308919219|gb|EFP64886.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia sp. 5_7_47FAA]
          Length = 300

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 39  NAYDEAAYLILHTLHLPIDTLGPFLDARLLPEEVAAVLKVIERRAVDRVPAAYITHEAFM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  L   +   ++     +L+L TG+G + +    + P
Sbjct: 99  HGMRFYVDERVIVPRSFIGELLEDGLEPWID--QEDGPTDVLELCTGSGCLSILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A  N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 157 NSTIDAVDLSPDALVVANRNVDEYHLQDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNEA 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +P ++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPHMALAGGNDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGEDQVFLVTR 297


>gi|145641198|ref|ZP_01796778.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
 gi|145274035|gb|EDK13901.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.4-21]
          Length = 314

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTSSEKETLVQLVLTRIEQRIPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|258621119|ref|ZP_05716153.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258586507|gb|EEW11222.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 314

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 71  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDQRVLVPRSPIGELIQNRFE 130

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 131 PWLI----EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLE 186

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 187 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 245

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 246 RRILANAPLYLKENGVLVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 299


>gi|330829720|ref|YP_004392672.1| adenine-specific methylase YfcB [Aeromonas veronii B565]
 gi|328804856|gb|AEB50055.1| adenine-specific methylase YfcB [Aeromonas veronii B565]
          Length = 315

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 12/238 (5%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   I+R ++       +     +      +      PR     +V +  A 
Sbjct: 72  LTSSERHRIAELIIRRVQERVPAAYLTNKAWYAGWEFYVDERVLIPRSPIAEMVANRFAP 131

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    K +  RI+DL TG+G + + +  E P  +   +DIS  AL +A+ N   +G+ +
Sbjct: 132 FL----KHEPTRIMDLCTGSGCIAIIMAHEFPEAEVDAIDISVDALNVAERNINDHGLEQ 187

Query: 149 RFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   ++SD F  +     +D+IVSNPPY++S  +  L  E R  +P ++L  G DGL   
Sbjct: 188 QVIPIRSDLFRDLPAGDKYDLIVSNPPYVDSEDMSDLPDEFR-HEPELALASGSDGLKLT 246

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +    +  L  +G+  VE+G N  + +   F       V      GG+  V +  R
Sbjct: 247 KRLLAHAADFLKDNGVLVVEVG-NSMIHLEAQFPEIPFTWVEFEN--GGHG-VFVMTR 300


>gi|308183178|ref|YP_003927305.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4]
 gi|308065363|gb|ADO07255.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori PeCan4]
          Length = 276

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS K LE+A  N     + ER    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISPKVLEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLVSNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +R        + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLSARLKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|306835872|ref|ZP_07468867.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens
           ATCC 49726]
 gi|304568237|gb|EFM43807.1| protein-(glutamine-N5) methyltransferase [Corynebacterium accolens
           ATCC 49726]
          Length = 277

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 110/261 (42%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +       + +  +  +   +       + R  + E +  +LG   F  + L
Sbjct: 26  DTRILISHLIHCGHLDIPLH-EPPMPGFE-VAFEALLRRREQREPLQYVLGTAWFGPLDL 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++ D A+  +          R++DL +G+GA+ L L    P  +  
Sbjct: 84  KVGPGVFIPRPETEVMADWAVHHA-------PGPRMVDLCSGSGALALYLQHYVPQAEVK 136

Query: 126 GVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V++S  AL+  ++N +  GV   + D   S   +   G  D++VSNPPY+       L 
Sbjct: 137 AVELSDAALDFTRANTLGTGVEVVQADATDSQTLADWNGTVDLVVSNPPYVPED--PNLQ 194

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
            EV   DPR+++ GG DG+   R +   ++R L   G+ ++E        V         
Sbjct: 195 PEVY-HDPRVAVFGGDDGMGVIRGLIPTIARLLRPGGVMAIEHDDTTGDAVRDAVRDHGG 253

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   KD  G  R +   R
Sbjct: 254 FSHIAPLKDLTGTPRFITAQR 274


>gi|160942863|ref|ZP_02090102.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445764|gb|EDP22767.1| hypothetical protein FAEPRAM212_00339 [Faecalibacterium prausnitzii
           M21/2]
          Length = 323

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 74/305 (24%), Positives = 116/305 (38%), Gaps = 51/305 (16%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+       TG    ++    D  L   Q   L     R    E +  + G   F 
Sbjct: 26  DADFDARELFRLATGRD-VRL---SDRPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFL 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +      PR +T  +V  A A +L  I      R+LDL  GTG + L + +  P 
Sbjct: 82  DFELAVGPGVLCPRADT-EVVAQAAAETLAGI---AAPRVLDLCAGTGCLGLGVKRFCPA 137

Query: 122 FKGVGVDISCKALEIAKSNA--------------------------------VTNGV--- 146
            +   V+ S  A    + NA                                  N +   
Sbjct: 138 AQVTCVEKSPAAFVYLEKNARCALTGQGRQTENVLEPSALEQEDAPTFDWGPALNALRAS 197

Query: 147 ---SERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              +     +Q+D F+  E    G  ++IVSNPPY+ +  ++ L  EV   +P ++L+ G
Sbjct: 198 KKPAYAVQPVQADLFTYWETLPEGQLELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAG 256

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR +A      L   G   +EIG+ Q+  V  +        +   +D+GGNDR 
Sbjct: 257 EDGLVFYRALAQHYKNALCPGGALVLEIGWQQREAVTALLAENGWADIRCIQDFGGNDRC 316

Query: 260 LLFCR 264
           ++  R
Sbjct: 317 VIAHR 321


>gi|309802546|ref|ZP_07696650.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bifidobacterium dentium JCVIHMP022]
 gi|308220610|gb|EFO76918.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Bifidobacterium dentium JCVIHMP022]
          Length = 298

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 32/283 (11%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-------------IVDPDSVLDDRQRFFLTNAIVRSLKHE 49
              D+        G+    V               DP   L+          I R  + E
Sbjct: 20  PEHDAKLLCAEAFGVDLQSVNKAMLLGDGLLGLAEDPVKPLEA-----FHAMIDRRARRE 74

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  I G   F  + L +    F PRPETEL+V   + +           R++DL  G+G
Sbjct: 75  PLQHITGHAPFRYLDLKVGPGVFIPRPETELIVQEGIDWITRNGGYH--ARVVDLCAGSG 132

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSN----------AVTNGVSERFDTLQSDWFS 159
           A+ LA++ E P  +   V+ S +  E  + N           + N   E  D  Q     
Sbjct: 133 AIGLAVVTEVPGSEVWAVEKSERTAEWTRRNLNETARAHPSIIGNYHLEIGDATQMPTLH 192

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLN 218
            ++G  D++++NPPY+    +     EVRD+DP ++L GG  DG      I     + L 
Sbjct: 193 QLDGTIDIVLTNPPYVPLSEIPE-QPEVRDYDPDMALYGGSADGTLIPERIILRAGKLLR 251

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             GL  +E   +Q   +     +          DY G  R L+
Sbjct: 252 PGGLLVMEHDISQGERLAAYANAHGFANTRVRNDYTGRPRYLI 294


>gi|300691621|ref|YP_003752616.1| adenine-specific methylase [Ralstonia solanacearum PSI07]
 gi|299078681|emb|CBJ51339.1| putative adenine-specific methylase [Ralstonia solanacearum PSI07]
          Length = 304

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 43  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAYM 102

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  LA  LP   +     +L+L TG+G + +    + P
Sbjct: 103 HGMRFYVDERVIVPRSFIGELLEDGLAPWLPY--EDGPTDVLELCTGSGCLAILAALQWP 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+   
Sbjct: 161 NATLDAVDLSPDALVVAQRNVDDYHLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 220

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 221 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 278

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G ++V L  R
Sbjct: 279 FPDLDLVWLPT---SAGEEQVFLVTR 301


>gi|146312520|ref|YP_001177594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Enterobacter sp. 638]
 gi|145319396|gb|ABP61543.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Enterobacter sp. 638]
          Length = 310

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNHFAGLMDH----QPEHILDMCTGSGCIAIACAYAYPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 TDALAVTEHNIEEHGLIHHVTPIRSDLFRDLPKLQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILACAPDYLTDDGILICEVG-NSMVHLMEQYPEVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G + V +  +
Sbjct: 284 --D-NGGEGVFMLTK 295


>gi|190570979|ref|YP_001975337.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|213019495|ref|ZP_03335301.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|190357251|emb|CAQ54673.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|212994917|gb|EEB55559.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 283

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 6/257 (2%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            D    +  V G+     I++  + +   +         +  +   I +I+G R+F++  
Sbjct: 25  LDCEIIMQYVLGVERSFTIMNHTNQVPRNKELLFWKLTKKRAERYPISQIIGNREFWSKN 84

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++    +PRP++E ++ + L +      K+  ++I D GTGTG + +++L E  +  G
Sbjct: 85  FIVNQHVLDPRPDSETVISTVLKY---YQNKKQKIKIADFGTGTGCLLISVLSEYEYAIG 141

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           VG + S +A +I   N   + +  R     + W      LFD+I+SNPPYI+   +  L 
Sbjct: 142 VGFEKSLEAYKITYQNTKKHNLLNRAKIFPNSWIE-CRDLFDLIISNPPYIKRSKLKDLQ 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EV+  +PRI+LDGGIDGLS Y +I   + + L KDG   +EIG +Q  ++ +I     L
Sbjct: 201 AEVQK-EPRIALDGGIDGLSCYLSIFPILKKCLKKDGFAILEIGEDQS-NIDKIIPLYGL 258

Query: 245 FLVNAFKDYGGNDRVLL 261
                  D  G  R ++
Sbjct: 259 AFQEYVYDLAGMKRCIV 275


>gi|157144728|ref|YP_001452047.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Citrobacter koseri ATCC BAA-895]
 gi|157081933|gb|ABV11611.1| hypothetical protein CKO_00455 [Citrobacter koseri ATCC BAA-895]
          Length = 310

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNRFAGLIS----EQPHHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL + + N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 SDALAVTEHNIEEHGLLNHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAPDYLSDDGILICEVG-NSMVHLIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|167555081|ref|NP_001107891.1| hemK methyltransferase family member 1 [Danio rerio]
 gi|161611486|gb|AAI55790.1| Hemk1 protein [Danio rerio]
          Length = 342

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 13/273 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           + L  S   +  V G  + + +        L D++R  +     + L    +  ++   D
Sbjct: 68  EPLLSSQYIISHVLGEKTLECVQKKRLRDTLTDKERETVWKLCSKRLTRMPVQYVIEEWD 127

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETE LV   L         R     L++G G+GA+ L+LL+  
Sbjct: 128 FRDLTLKMKPPVFIPRPETEELVGLVLEDF---ESIRGDFHGLEVGCGSGAISLSLLRSL 184

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
           P  +   +D S  A+ +   NA   G+ +R +    D     +         D IVSNPP
Sbjct: 185 PQLRVFALDQSQDAVCLTMENANRLGLQDRLEVHHLDVVKDADVILSKCNPVDFIVSNPP 244

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI S  ++ L  E+  F+   +LDGG DGL   R I    S+ L K G   +E+      
Sbjct: 245 YILSQDMEALQTEILGFEDHAALDGGSDGLFVIRPILALASKLLTKQGRVYLEVSSCHPP 304

Query: 234 DVVRI-FESRK-LFLVNAFKDYGGNDRVLLFCR 264
            + ++  E+      + +  D     R  +  +
Sbjct: 305 VIQQLVMETMPEFIYLESRCDLSNRPRFCILQK 337


>gi|94310361|ref|YP_583571.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Cupriavidus metallidurans CH34]
 gi|93354213|gb|ABF08302.1| N5-glutamine methyltransferase [Cupriavidus metallidurans CH34]
          Length = 297

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R +        I      
Sbjct: 34  NAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEIDAVHKVIDRRVNERVPAAYITHEAFM 93

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  + S    PR     L+   L   +   +   +  +L+L TG+G + +      P
Sbjct: 94  HGLRFYVDSRVIVPRSFIGELLQEGLEPWIG--DTGQIGPVLELCTGSGCLPIIAAHVWP 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
             +   VDIS  AL +A+ N     +  R    + D ++ +     +DVI++NPPY+   
Sbjct: 152 HARIDAVDISSDALAVARRNVADYKMENRITLYEGDLYAPLPSTATYDVILTNPPYVNEQ 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PRI+L GG DG+   R I  G  + LN  G   VEIG N++ +V   
Sbjct: 212 SMRDLPPEYMA-EPRIALAGGDDGMDVVRRIIAGAKKRLNPGGALVVEIG-NERENVEAA 269

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F    +  ++      G+D+V L  
Sbjct: 270 FPDLDIVWLSV---SAGDDQVFLVT 291


>gi|303234963|ref|ZP_07321587.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna BVS033A4]
 gi|302493818|gb|EFL53600.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna BVS033A4]
          Length = 263

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L ++   +    I+  +  +++     +        +   I  ILG++ FYN + 
Sbjct: 14  DCLMILEKLYNYNFSDSIIHSNDKINENDEKIILEYKKLYDEDIPIEYILGFKYFYNRKF 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              S    PR +TE+LVD  +         R    IL++G G+G + + L  E    K +
Sbjct: 74  YTDSSVLIPRFDTEILVDEIINI------NRKFENILEIGIGSGIISITLNLEL-NSKVL 126

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDI+ KA+E++K NA +   +   + + SD + +V   FD+IVSNPPYI+    + L  
Sbjct: 127 GVDINEKAIELSKKNAESLNAT-NVEFIYSDLYENVNSKFDLIVSNPPYIDKKDFNSLET 185

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGYNQ+  +  I +     
Sbjct: 186 KILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIFEILDENGFE 244

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                KD+ G DRV++  R
Sbjct: 245 NHYCIKDFNGFDRVIIARR 263


>gi|301647566|ref|ZP_07247363.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 146-1]
 gi|301074256|gb|EFK89062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 146-1]
          Length = 310

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 13/240 (5%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283


>gi|254360980|ref|ZP_04977125.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|153092466|gb|EDN73521.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica PHL213]
          Length = 314

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 8/222 (3%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  + N I   L   + +  +     F      +      PR     L+      
Sbjct: 76  LTRVEKERIINLICERLGSRKPVAYLTNSAWFCGGEYYVDERVIVPRSPIGELI----KK 131

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               I K +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + VS 
Sbjct: 132 GFKGIIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSH 191

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F+++    +D+IV+NPPY++   +  +  E    +P ++L  G DGL   +
Sbjct: 192 RVFPICSDLFNNLPQDKYDLIVTNPPYVDEEDLGDMPEEF-HHEPALALGSGKDGLDLTK 250

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            I    + +LN DG+   E+G N  V ++  F S     +  
Sbjct: 251 RILAQAADYLNDDGVLVCEVG-NSMVHLIEQFPSVPFNWLEF 291


>gi|241662926|ref|YP_002981286.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia pickettii 12D]
 gi|240864953|gb|ACS62614.1| modification methylase, HemK family [Ralstonia pickettii 12D]
          Length = 300

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 39  NAYDEAAYLILHTLHLPIDTLEPFLDARLLPEEVAAVLKVIERRAVDRVPAAYITHEAFM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  L   +   ++     +L+L TG+G + +    + P
Sbjct: 99  HGMRFYVDERVIVPRSFIGELLEDGLEPWID--QEDGPTDVLELCTGSGCLSILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A  N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 157 NSTIDAVDLSPDALVVANRNVDEYHLQDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNEA 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +P ++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPHMALAGGNDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGEDQVFLVTR 297


>gi|170019361|ref|YP_001724315.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ATCC 8739]
 gi|169754289|gb|ACA76988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli ATCC 8739]
          Length = 310

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PD-----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+      +    +   +   I R  +   +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVISRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAELIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|291613905|ref|YP_003524062.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Sideroxydans lithotrophicus ES-1]
 gi|291584017|gb|ADE11675.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Sideroxydans lithotrophicus ES-1]
          Length = 301

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 120/265 (45%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L   ++    D+ L   + + + + I R   +      +      
Sbjct: 40  NAYDEAAYLILHTLNLPLDRLDPFLDARLTQSEIYDVLDIIERRTEQRIPAAYLTNQAWL 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++   +      PR     L+   LA  +  +E+  +  +LD+ TG+G + +      P
Sbjct: 100 GDLSFYVDERVIVPRSFIAELLREQLAPWISDVER--IHNVLDMCTGSGCLAILAAHAFP 157

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
                 VD+S  AL++A+ N     + ER   ++SD F  +EG  +D+I+SNPPY+++  
Sbjct: 158 DAHVDAVDLSADALDVAQYNVTDYDLEERISLIESDMFDKLEGKRYDLIISNPPYVDAPS 217

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E + ++P+ +L  G DGL   R I +  ++HL  +G+  VEIG+N +  +   F
Sbjct: 218 VAALPQEYK-YEPQQALGSGTDGLDATRVILEHAAKHLTSNGILVVEIGHN-RDALEAAF 275

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     ++      G++ V L  +
Sbjct: 276 PNLPFTWLDV---SAGDEFVFLLHK 297


>gi|22125479|ref|NP_668902.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis KIM 10]
 gi|45442202|ref|NP_993741.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Microtus str. 91001]
 gi|21958373|gb|AAM85153.1|AE013761_6 putative adenine-specific methylase [Yersinia pestis KIM 10]
 gi|45437066|gb|AAS62618.1| Predicted rRNA or tRNA methylase [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 333

 Score =  209 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 91  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELIENRFDG 150

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 151 LIHHQPN----HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEH 206

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 207 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 265

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +   K   G D V +  +
Sbjct: 266 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEFEK---GGDGVFMLTK 318


>gi|328675473|gb|AEB28148.1| Adenine-specific methylase [Francisella cf. novicida 3523]
          Length = 314

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 113/237 (47%), Gaps = 8/237 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L + ++  +     R+   + +  IL    F  +   +      PR     L+ +  +
Sbjct: 68  RLLIEEKKIIIDYVYQRACLRKPLPYILKKAWFAGMEFDIDERVIIPRSPIAELIRNEFS 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  I+  DV  +LDL TG+G + +A            VDIS  AL +A  N   + +S
Sbjct: 128 PWINDID--DVTSVLDLCTGSGCIGIACSNVFEEANITLVDISDDALAVANHNIKKHQLS 185

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   ++SD F ++ G  FD+IVSNPPY++   ++ +  E   ++P+++L+ G DGL   
Sbjct: 186 DRVRAIKSDLFDNLHGQKFDLIVSNPPYVDKEDLNSMPQEY-HYEPKLALEAGDDGLELA 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + I     +++ ++G+  VE+G +Q   ++ +        + +F D  G D V L  
Sbjct: 245 KKIILEADQYMTENGVLIVEVGNSQ-YALMEMCPDIPFTWL-SFAD--GGDGVFLLT 297


>gi|312139168|ref|YP_004006504.1| sam dependent methyltransferase [Rhodococcus equi 103S]
 gi|325673527|ref|ZP_08153218.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|311888507|emb|CBH47819.1| SAM dependent methyltransferase [Rhodococcus equi 103S]
 gi|325555548|gb|EGD25219.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 297

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/270 (28%), Positives = 116/270 (42%), Gaps = 14/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      V G+   ++ + P  ++D          + R ++   +  I G     N
Sbjct: 25  ARVDAELLAAHVLGVERTRLGLVP--LVDPSVIEEYRELVARRVQRIPLQHITGSTAMGN 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +    F PRPETEL    A A +           +LDL TGTGA+ LA+    P  
Sbjct: 83  VSLEVGPGVFVPRPETEL--LLAWALAHLEASGLRAPVVLDLCTGTGALALAIAHARPDA 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               V++  +AL  A+ NA     +        + D       + +EG  D++VSNPPYI
Sbjct: 141 VVHAVELQPQALAWARRNADRRRDAGDTPINLVQGDVTDRALLTELEGGVDLVVSNPPYI 200

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               V  L  EV D DP  +L GG DGLS  + + + ++R L   G   +E        V
Sbjct: 201 PEGAV--LDPEVADHDPHTALFGGADGLSVIKPMINNIARWLRIGGAVGIEHDDTNGDQV 258

Query: 236 VRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
             +F +R++F  V    D  G  R ++  R
Sbjct: 259 AELFRARRVFDRVVEHPDLAGRPRFVVAHR 288


>gi|300897013|ref|ZP_07115492.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 198-1]
 gi|300359194|gb|EFJ75064.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 198-1]
          Length = 311

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 16/234 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
            +P + L  G DGL   R I    + +L  DG+   E+G      +V + E   
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGN----SMVHLMEQYP 274


>gi|261493622|ref|ZP_05990142.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261495460|ref|ZP_05991908.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308965|gb|EEY10220.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261310804|gb|EEY11987.1| peptide chain release factor methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 314

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 8/222 (3%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  + N I   L   + +  +     F      +      PR     L+      
Sbjct: 76  LTRVEKERIINLICERLGSRKPVAYLTNSAWFCGGEYYVDERVIVPRSPIGELI----KK 131

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               I K +  RILD+ TG+G + +A  +  P  +   VD+S  AL++A+ N   + VS 
Sbjct: 132 GFKGIIKNEPHRILDMCTGSGCIAIACAERFPEAEVDAVDLSLDALDVAQINIERHQVSH 191

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F+++    +D+IV+NPPY++   +  +  E    +P ++L  G DGL   +
Sbjct: 192 RVFPICSDLFNNLPQDKYDLIVTNPPYVDEEDLGDMPEEF-HHEPALALGSGKDGLDLTK 250

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            I    + +LN DG+   E+G N  V ++  F S     +  
Sbjct: 251 RILAQAADYLNDDGVLVCEVG-NSMVHLIEQFPSVPFNWLEF 291


>gi|309973336|gb|ADO96537.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus
           influenzae R2846]
          Length = 314

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L+++G+   E+G N  V ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKQAPDYLSENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|295103956|emb|CBL01500.1| HemK family putative methylases [Faecalibacterium prausnitzii
           SL3/3]
          Length = 323

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/305 (24%), Positives = 115/305 (37%), Gaps = 51/305 (16%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+       TG    ++    D  L   Q   L     R    E +  + G   F 
Sbjct: 26  DADFDARELFRLATGRD-VRL---SDCPLTAEQAAALEVLCTRRAAREPLQYLCGSWSFL 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +      PR +T  +V  A A +L  IE     R+LDL  GTG + L + +  P 
Sbjct: 82  DFELAVGPGVLCPRADT-EVVAQAAAETLAGIES---PRVLDLCAGTGCLGLGVKRFCPA 137

Query: 122 FKGVGVDISCKALEIAKSNA--------------------------------VTNGVSE- 148
            +   V+ S  A    + NA                                  N +   
Sbjct: 138 AQVTCVEKSPAAFTYLEKNARCALTGQGRQTENVLEPSALEQADAPALDWGPALNALRAG 197

Query: 149 -----RFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                    +Q D F+  E    G  ++IVSNPPY+ +  ++ L  EV   +P ++L+ G
Sbjct: 198 KKPVYAVQPVQGDLFTYWETLPEGQLELIVSNPPYLTAAEMEQLQPEVAQ-EPAMALEAG 256

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR +A      L   G   +EIG+ Q+  V  +        +   +D+GGNDR 
Sbjct: 257 EDGLVFYRALAQHYQNALCPGGALVLEIGWQQREAVSALLAENGWADIRCIQDFGGNDRC 316

Query: 260 LLFCR 264
           ++  R
Sbjct: 317 VIAHR 321


>gi|94499014|ref|ZP_01305552.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65]
 gi|94428646|gb|EAT13618.1| ribosomal protein L3P methyltransferase [Oceanobacter sp. RED65]
          Length = 305

 Score =  209 bits (534), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 113/257 (43%), Gaps = 8/257 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVR 64
           ++ S +     +            L   ++  +   + R  L+ + +  +     F  + 
Sbjct: 42  EAISLVTHCLNMPPQVTSEQAQCRLITDEKLSIAKLLHRRILERKPLAYLTNQAFFAGMP 101

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     +++   A   P  +  +  RILDL  G+G + +A L+  P  + 
Sbjct: 102 FYVDERVLVPRSPLAEMIEHRFA---PWNKIEEPQRILDLCCGSGCIGIASLQAFPDAQL 158

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S  AL++A+ N   +G+ ++   +QSD F+ ++  +D+IVSNPPY++   +  + 
Sbjct: 159 DLADLSRDALDVAEINIDHHGLWQQVAAIQSDLFNELQPGYDLIVSNPPYVDEEDLSAMP 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E    +P + L  G+DGL   R I    + +LN  GL  VE+G N  V +   F     
Sbjct: 219 DEY-QHEPAMGLGSGVDGLDITRKILAQAADYLNDGGLLVVEVG-NSCVHLDEAFPEVAF 276

Query: 245 FLVNAFKDYGGNDRVLL 261
             V   +  GG+   ++
Sbjct: 277 NWVEFER--GGHGVFVM 291


>gi|268590455|ref|ZP_06124676.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rettgeri DSM 1131]
 gi|291314135|gb|EFE54588.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rettgeri DSM 1131]
          Length = 310

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+      
Sbjct: 68  LTPTERHRIIERVLRRINERIPVAYLTNRSWFCGHEFYVDERVLIPRSPIGELI----NN 123

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               +   +   ILDL TG+G + +A   E P  +   VDIS   L +A+ N   +G+  
Sbjct: 124 HFVGLVADEPQTILDLCTGSGCIAIACAYEFPDAEVDAVDISSDVLAVAEQNIANHGLEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   ++SD F  +    +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R
Sbjct: 184 RVIPIRSDLFRDMPEVKYDLIVTNPPYVDAEDMDDLPEEFRV-EPELALAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     R L ++G+   E+G N  V ++  +       ++    YGG D V +  R
Sbjct: 243 RILANAPRFLTEEGVLVCEVG-NSMVHLIEQYPEIPFIWLDFE--YGG-DGVFMLTR 295


>gi|145637044|ref|ZP_01792707.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH]
 gi|145269698|gb|EDK09638.1| N5-glutamine methyltransferase [Haemophilus influenzae PittHH]
          Length = 314

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L+++G+   E+G N  V ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKQAPDYLSENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|51596952|ref|YP_071143.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 32953]
 gi|51590234|emb|CAH21871.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
          Length = 333

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 91  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELIENRFDG 150

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 151 LIHHQPN----HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEH 206

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 207 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 265

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +   K   G D V +  +
Sbjct: 266 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEFEK---GGDGVFMLTK 318


>gi|302380151|ref|ZP_07268623.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna ACS-171-V-Col3]
 gi|302311934|gb|EFK93943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Finegoldia magna ACS-171-V-Col3]
          Length = 263

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 82/259 (31%), Positives = 131/259 (50%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L ++   S    I+  +  +++     +        +   I  ILG++ FYN + 
Sbjct: 14  DCLMILEKLYNYSFSDSIIHSNDKINENDEKTILEYKKLYDEDIPIEYILGFKYFYNRKF 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              S    PR +TE+LVD  +         R    IL++G G+G + + L  E    K +
Sbjct: 74  YTHSSVLIPRFDTEILVDEIIKI------NRKFENILEIGIGSGIISITLNLEL-NSKVL 126

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDI+ KA+E++K NA +   +   + + SD + +V   FD+IVSNPPYI+    + L  
Sbjct: 127 GVDINKKAIELSKKNAESLNAT-NVEFIYSDLYENVNSKFDLIVSNPPYIDKKDFNSLET 185

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGYNQ+  +  I +     
Sbjct: 186 KILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIFEILDENGFE 244

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                KD+ G DRV++  R
Sbjct: 245 NRYCIKDFNGFDRVIIARR 263


>gi|292488901|ref|YP_003531788.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430]
 gi|292900045|ref|YP_003539414.1| methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291199893|emb|CBJ47017.1| putative methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291554335|emb|CBA21715.1| putative adenine-specific methylase [Erwinia amylovora CFBP1430]
          Length = 310

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L++   A 
Sbjct: 68  LTLSERQRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINQHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +
Sbjct: 128 IIGHQPQ----HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++ D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R
Sbjct: 184 HVTPIRCDLFRELPKTQYDLIVTNPPYVDADDMDDLPNEYR-HEPELGLAAGNDGLTLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 243 RILGCAADYLSEQGVLICEVG-NSMVHLINQYPDVPFTWLEFE---NGGDGVFMLTR 295


>gi|16273121|ref|NP_439357.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae Rd KW20]
 gi|260581099|ref|ZP_05848920.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae RdAW]
 gi|1175938|sp|P45106|Y1201_HAEIN RecName: Full=Uncharacterized adenine-specific methylase HI_1201
 gi|1574130|gb|AAC22855.1| adenine specific methylase, putative [Haemophilus influenzae Rd
           KW20]
 gi|260092228|gb|EEW76170.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Haemophilus influenzae RdAW]
          Length = 314

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 234 FEPELALGSGSDGLNITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|117619640|ref|YP_856879.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|117561047|gb|ABK37995.1| adenine-specific methylase YfcB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 311

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 12/238 (5%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   I+R ++       +     +      +      PR     +V +  A 
Sbjct: 68  LTTSERHRIAELIIRRVQERVPAAYLTNKAWYAGWEFYVDERVLIPRSPIAEMVANRFAP 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    K +  RI+DL TG+G + + +  E P  +   +DIS  AL +A+ N   +G+ +
Sbjct: 128 FL----KHEPTRIMDLCTGSGCIAIIMAHEFPEAEVDAIDISVDALNVAERNINDHGLEQ 183

Query: 149 RFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   ++SD F  +     +D+IVSNPPY++S  +  L  E R  +P ++L  G DGL   
Sbjct: 184 QVIPIRSDLFRDLPVGDKYDLIVSNPPYVDSEDMSDLPDEFR-HEPELALASGSDGLKLT 242

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +    +  L +DG+  VE+G N  + +   F       V      GG+  V +  R
Sbjct: 243 KRLLANAADFLKEDGVLVVEVG-NSMIHLEAQFPDVPFTWVEFEN--GGHG-VFVMSR 296


>gi|329124068|ref|ZP_08252615.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius
           ATCC 11116]
 gi|327467493|gb|EGF12991.1| protein-(glutamine-N5) methyltransferase [Haemophilus aegyptius
           ATCC 11116]
          Length = 314

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFKWVE 291


>gi|217077796|ref|YP_002335514.1| methyltransferase [Thermosipho africanus TCF52B]
 gi|217037651|gb|ACJ76173.1| methyltransferase [Thermosipho africanus TCF52B]
          Length = 261

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 26/267 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              +++  + ++TG +   ++  P+    +       + + + L    +  +L  + FY 
Sbjct: 16  PELEAYLVIKKITGKTKEYLVAHPEYQFCE---QSFFDLLNKRLVGFPLSYLLNEKSFYK 72

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PRPETELLV++AL      I+K  + ++ ++G G+GAV +++L E+   
Sbjct: 73  HNFYVEEGVLIPRPETELLVENALKV----IDKEKIKKVAEIGVGSGAVIISILLET-NC 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVI 179
            G G DIS KALEIAK NA    V +R D     +    +  +D   +IVSNPPY+++  
Sbjct: 128 VGFGTDISKKALEIAKKNARKFRVIDRLDLRLGKFLEPFKNEYDEIELIVSNPPYVKNN- 186

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  EV  F+P+ +L GG DGL  YR      S  LN   +  +EIG++Q       F
Sbjct: 187 -SNLQKEVM-FEPKEALFGGEDGLDFYREFL--SSYDLN-GKIVVMEIGHDQG----DFF 237

Query: 240 ESRKLFLVNAFKDYGGNDRVLL--FCR 264
             +     N  KDY GNDR+++  F R
Sbjct: 238 RKKDW---NVIKDYSGNDRIVIKDFRR 261


>gi|261838406|gb|ACX98172.1| s-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori 51]
          Length = 276

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLKKERVFLHTHAYLELNHEEEARFFEWVGKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              D+S KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDVSLKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKVP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|290508411|ref|ZP_06547782.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Klebsiella sp. 1_1_55]
 gi|289777805|gb|EFD85802.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Klebsiella sp. 1_1_55]
          Length = 334

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 74  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 133

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 134 VLVPRSPIGELINNQFAGLI----NHKPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 189

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N  ++G+      ++SD F  +    +D+IV+NPPY++   +  L  E  +
Sbjct: 190 PDALAVAEHNVESHGLIHHVTPIRSDLFRDLPKLQYDLIVTNPPYVDEEDMADLPEEY-E 248

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 249 HEPVLGLASGSDGLKLTRRILGNAPDYLSDDGILICEVG-NSMVHLMEQYPDVPFTWLEF 307

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 308 --D-NGGDGVFMLTK 319


>gi|269139791|ref|YP_003296492.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|267985452|gb|ACY85281.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella tarda EIB202]
 gi|304559657|gb|ADM42321.1| Ribosomal protein L3 methyltransferase [Edwardsiella tarda FL6-60]
          Length = 310

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 109/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPMDIPEDMRSARLTLSERHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+D+  +  +      +   ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELIDNRFSGLIGH----EPQHILDMCTGSGCIAIACAYAFPQAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
              L + + N   +G+ ++   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 166 SDVLAVTEHNIQQHGLEQQVTPIRSDLFRELPPLRYDLIVTNPPYVDEEDMSDLPDEFR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  + S     +  
Sbjct: 225 HEPTLGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVG-NSMVHLMAQYPSIPFVWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  R
Sbjct: 284 --D-NGGDGVFMLTR 295


>gi|297521848|ref|ZP_06940234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
          Length = 287

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 13/240 (5%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283


>gi|319897333|ref|YP_004135529.1| adenine-specific methylase [Haemophilus influenzae F3031]
 gi|317432838|emb|CBY81203.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae F3031]
          Length = 314

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFKWVE 291


>gi|312173062|emb|CBX81317.1| putative adenine-specific methylase [Erwinia amylovora ATCC
           BAA-2158]
          Length = 310

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L++   A 
Sbjct: 68  LTLSERQRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINQHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+ +
Sbjct: 128 IIGHQPQ----HILDMCTGSGCIAIACAWAFPQAEVDAVDISGDALAVTEQNISAHGLEQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++ D F  +    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL+  R
Sbjct: 184 HVTPIRCDLFRELPKTQYDLIVTNPPYVDADDMDDLPSEYR-HEPELGLAAGNDGLTLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + +L++ G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 243 RILGCAADYLSEQGVLICEVG-NSMVHLINQYPDVPFTWLEFE---NGGDGVFMLTR 295


>gi|152971258|ref|YP_001336367.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|262043379|ref|ZP_06016505.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|329997371|ref|ZP_08302754.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Klebsiella sp. MS 92-3]
 gi|150956107|gb|ABR78137.1| putative adenine-specific methylase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259039260|gb|EEW40405.1| protein-(glutamine-N5) methyltransferase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|328539120|gb|EGF65156.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Klebsiella sp. MS 92-3]
          Length = 334

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 74  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 133

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +          ILD+ TG+G + +A     P  +   VDIS
Sbjct: 134 VLVPRSPIGELINNQFAGLI----NHKPQHILDMCTGSGCIAIACAYAFPEAEVDAVDIS 189

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N  ++G+      ++SD F  +    +D+IV+NPPY++   +  L  E  +
Sbjct: 190 PDALAVAEHNVESHGLIHHVTPIRSDLFRDLPKLQYDLIVTNPPYVDEEDMADLPEEY-E 248

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 249 HEPVLGLASGSDGLKLTRRILGNAPDYLSDDGILICEVG-NSMVHLMEQYPDVPFTWLEF 307

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 308 --D-NGGDGVFMLTK 319


>gi|163840179|ref|YP_001624584.1| peptide release factor-glutamine N5-methyltransferase
           [Renibacterium salmoninarum ATCC 33209]
 gi|162953655|gb|ABY23170.1| peptide release factor-glutamine N5-methyltransferase
           [Renibacterium salmoninarum ATCC 33209]
          Length = 300

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 10/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      ++G +  ++      +L+          +    +   +  + G   F ++ L
Sbjct: 29  DAEILAAHLSGKTLGEI--RAAVLLNAPVPAGFAELVAERAQRIPLQHLTGVAYFRHLEL 86

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPE+E +   A+ F   ++E    V ++DLGTG+GA+  A+  E P  +  
Sbjct: 87  AVGPGVFIPRPESEGVAQLAINFLAAQVELTAPV-VVDLGTGSGALAAAIASEVPGSRVF 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V++S  A + A  N    G   + +    D    F  ++GL DV++SNPPYI    V  
Sbjct: 146 AVELSDLAHDWAARNLARYGA--QVELRLGDLRSAFEDLDGLADVVLSNPPYIPDEAVPN 203

Query: 183 LGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
              EV + DP I+L GG  DGL   R       R L   GL  +E    Q   +VR+FE+
Sbjct: 204 -EPEVAEHDPEIALYGGWADGLELPRAALASAVRLLKPGGLFVMEHAEVQAATMVRLFEN 262

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                V    D  G +R  
Sbjct: 263 AGFGYVEGHLDLTGKERAT 281


>gi|148828351|ref|YP_001293104.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae PittGG]
 gi|148719593|gb|ABR00721.1| N5-glutamine methyltransferase [Haemophilus influenzae PittGG]
          Length = 314

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTSSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   VD+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I      +L ++G+   E+G N  V ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKLAPNYLTENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|15827566|ref|NP_301829.1| protoporphyrinogen oxidase [Mycobacterium leprae TN]
 gi|221230043|ref|YP_002503459.1| putative protoporphyrinogen oxidase [Mycobacterium leprae Br4923]
 gi|13432147|sp|P45832|HEMK_MYCLE RecName: Full=Protein methyltransferase hemK homolog; AltName:
           Full=M.MleHemKP
 gi|13093116|emb|CAC31516.1| possible protoporphyrinogen oxidase [Mycobacterium leprae]
 gi|219933150|emb|CAR71230.1| possible protoporphyrinogen oxidase [Mycobacterium leprae Br4923]
          Length = 288

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 11/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +  D+   +      ++A+    +   +  ++G   F  
Sbjct: 24  ARCDAEQLAAHLAGTDRGRLAL-LDTP-GEEFFRRYSDAVAARSRRVPLQHLIGTVSFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +  D F PRPETE ++   +A  LP     +   I+D  TG+GA+ +AL    P  
Sbjct: 82  VVLHVGPDVFIPRPETEAILAWVMAQRLP-----ERPVIVDACTGSGALAVALAHHRPAA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV- 180
           + +G+D S  AL+ A+ NA    V   R D         ++G  D+ V+NPPY+    V 
Sbjct: 137 RVIGIDDSDSALDYARRNAEGTAVECVRADVTTPALLPELDGCVDLFVANPPYVPDDPVV 196

Query: 181 -DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI- 238
              L  EV  +DPR ++ GG DG++    I     R L   GL +VE   +  V  + + 
Sbjct: 197 QSILEPEVTQYDPRHAVFGGPDGMALTADIVGLAGRWLRPGGLFAVEHDDSTSVPTLDLV 256

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +     V   +D  G  R +   R
Sbjct: 257 YRTDLFDDVLTHRDLAGRPRFVTARR 282


>gi|33866508|ref|NP_898067.1| protoporphyrinogen oxidase [Synechococcus sp. WH 8102]
 gi|33633286|emb|CAE08491.1| possible protoporphyrinogen oxidase [Synechococcus sp. WH 8102]
          Length = 296

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 7/218 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   + ++ L +S+    PR ETE+LVD AL      I    + R  DLGTG+G
Sbjct: 77  PLQHLVGRCPWRDLELAVSAAALIPRQETEVLVDLALE----TIAGMSIERWADLGTGSG 132

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFD 166
           A+ +AL +  P   G  VD+S  AL +A++N         +   Q  W+  +E   G  D
Sbjct: 133 AIAVALSRAMPATPGHAVDLSPNALALARTNLEALAPEGEWHLHQGRWWEPLEPWWGHID 192

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPYI S ++  L   VRD +P ++L GGIDGL   R +  G  R L   G   +E
Sbjct: 193 LVVCNPPYIPSDLILNLDPVVRDHEPHLALAGGIDGLQAIREVVAGACRALAPGGWILIE 252

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             ++Q    + + +   L  + A +D  G +R  L  R
Sbjct: 253 HHHDQSAPALNLLKQAGLSSIRAARDLEGVNRFALARR 290


>gi|261346200|ref|ZP_05973844.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rustigianii DSM 4541]
 gi|282565856|gb|EFB71391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Providencia rustigianii DSM 4541]
          Length = 310

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 60/237 (25%), Positives = 103/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+++    
Sbjct: 68  LTTTERHRIIERVLRRINDRIPVAYLTNSSWFCGHEFYVDERVLIPRSPIGELINNHFVG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L      +   ILDL TG+G + +A   E P  +   VDIS   L +A+ N   +G+  
Sbjct: 128 LLS----DEPQTILDLCTGSGCIAIACAHEFPEAEVDAVDISADVLAVAEQNIANHGLEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   ++SD F  +    +D+IV+NPPY+++  +D L  E R  +P ++L  G DGL   R
Sbjct: 184 RVIPIRSDLFRDMPEVKYDLIVTNPPYVDAEDMDDLPEEFRV-EPELALAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I     R L ++G+   E+G N  V ++  +       ++      G D V +  R
Sbjct: 243 RILANAPRFLTEEGILVCEVG-NSMVHLIEQYPDIPFIWLDFE---FGGDGVFMLTR 295


>gi|15596875|ref|NP_250369.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PAO1]
 gi|107101109|ref|ZP_01365027.1| hypothetical protein PaerPA_01002141 [Pseudomonas aeruginosa PACS2]
 gi|116049627|ref|YP_791568.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218892367|ref|YP_002441234.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa LESB58]
 gi|254234778|ref|ZP_04928101.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719]
 gi|296389941|ref|ZP_06879416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PAb1]
 gi|313110363|ref|ZP_07796252.1| putative DNA methylase [Pseudomonas aeruginosa 39016]
 gi|18203013|sp|Q9I347|Y1678_PSEAE RecName: Full=Uncharacterized adenine-specific methylase PA1678
 gi|9947650|gb|AAG05067.1|AE004595_6 probable DNA methylase [Pseudomonas aeruginosa PAO1]
 gi|115584848|gb|ABJ10863.1| putative DNA methylase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126166709|gb|EAZ52220.1| hypothetical protein PACG_00647 [Pseudomonas aeruginosa C3719]
 gi|218772593|emb|CAW28376.1| probable DNA methylase [Pseudomonas aeruginosa LESB58]
 gi|310882754|gb|EFQ41348.1| putative DNA methylase [Pseudomonas aeruginosa 39016]
          Length = 304

 Score =  209 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +R  L   + R ++       +LG   F
Sbjct: 33  NAWDEARHLVLGSLHLPWEISDSYLDCRLEDDERAELAEILRRRIEERIPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +  ++      PR     L++   A  LP     +  RILDL TG+G + +A      
Sbjct: 93  CGIPFSVDERVLVPRSPIAELIEQRFAPWLPA----EPARILDLCTGSGCIGIACAYAFE 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S  ALE+A  N   + + ER  T+Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 149 QAEVVLADLSFDALEVANVNIERHDLGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL++ GL  VE+G N +V V  ++
Sbjct: 209 FADMPAEF-HHEPELGLACGDDGLDLVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 267 PEVDFTWLEF 276


>gi|300704248|ref|YP_003745851.1| adenine-specific methylase [Ralstonia solanacearum CFBP2957]
 gi|299071912|emb|CBJ43241.1| putative adenine-specific methylase [Ralstonia solanacearum
           CFBP2957]
          Length = 300

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 39  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLRVIERRTVDRVPAAYLTHEAFM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + VR  +      PR     L++S L   +P   +     +L+L TG+G + +    + P
Sbjct: 99  HGVRFYVDERVIVPRSFIGELLESGLDPWIPH--EDGPTDVLELCTGSGCLAILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+   
Sbjct: 157 NATLDAVDLSPDALVVAQRNVDDFHLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGEDQVFLVTR 297


>gi|108563436|ref|YP_627752.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori HPAG1]
 gi|107837209|gb|ABF85078.1| S-adenosylmethionine-dependent methyltransferase [Helicobacter
           pylori HPAG1]
          Length = 274

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L   +       + + L    I  +LG  DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHEHLELTHEEETHFFELVEKRLNDCPIEYLLGSCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+G V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVQKALDI----ISQYHLKEIGEIGVGSGCVSISLALENPKLSI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    Q+  +  +    +++VSNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFCLKERVFLKQTRLWDRMP-TIEMLVSNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +           E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLVCEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|148826190|ref|YP_001290943.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae PittEE]
 gi|148716350|gb|ABQ98560.1| N5-glutamine methyltransferase [Haemophilus influenzae PittEE]
          Length = 314

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLIQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGNDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|78185424|ref|YP_377859.1| modification methylase HemK [Synechococcus sp. CC9902]
 gi|78169718|gb|ABB26815.1| Modification methylase HemK [Synechococcus sp. CC9902]
          Length = 302

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 107/219 (48%), Gaps = 7/219 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +  ++G   + ++ + +SS    PR ETELLVD AL+F+      R      DLGTG+
Sbjct: 82  MPLQYLVGVCPWRDLLIEVSSAALIPRQETELLVDLALSFA----GGRPPRSWADLGTGS 137

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLF 165
           GA+ ++L +  P  +G  VD+S  AL +A+ N       +        W+  +    G  
Sbjct: 138 GAIAVSLCRAWPEAEGHAVDLSVDALALAEKNLKALAPQQSCRLHHGSWWLPLQAFWGQL 197

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +++VSNPPYI S ++  L   VR+ +P ++L  G DGL   R++     R L   G+  +
Sbjct: 198 EIVVSNPPYIPSPLLGELDPVVREHEPHVALLAGEDGLEAIRSLLMDAPRALAPGGVLFL 257

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           E  ++Q  +V  +  +  L  V++  D  G  R     R
Sbjct: 258 EHHHDQSENVQDLMRAAGLVNVSSANDLEGIARFAQGQR 296


>gi|145627817|ref|ZP_01783618.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21]
 gi|144979592|gb|EDJ89251.1| N5-glutamine methyltransferase [Haemophilus influenzae 22.1-21]
          Length = 314

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFL-TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   A+ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLALTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPYHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F+++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFTNILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  V ++  +       V 
Sbjct: 248 NITKQILKQAPNYLTENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|297380251|gb|ADI35138.1| methyltransferase, HemK family [Helicobacter pylori v225d]
          Length = 276

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEARFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKKTHLWDRMP-TIQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+G++Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAALKIP--FLACEMGHDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|221134758|ref|ZP_03561061.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Glaciecola sp. HTCC2999]
          Length = 311

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 10/236 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L  R++  + N +   +   E +  +     F      +      PR     L+      
Sbjct: 74  LVQREKEQVVNLLTERINTLEPLPYLTHQAWFAGFPFYVDHRVLIPRSPFAELIHDEFTP 133

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +        I+DL TG G + +AL  + P  +   +DIS  ALE+A  N   +G++E
Sbjct: 134 WLSQ----PPQLIMDLCTGGGCIAIALAHQFPHAQVDALDISEDALEVASLNIDEHGLTE 189

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FS V G  +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   +
Sbjct: 190 RVYPVQSDVFSGVMGQTYDLIVSNPPYVDAEDMSDLPQEFL-HEPSLALAAGHDGLDIVQ 248

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           TI +   +HL+ +G   VE+G N  V + + F    +  +      GG     +  
Sbjct: 249 TILEQAPQHLSPEGWLFVEVG-NSSVHMEQRFPGLNVQWIEFE--LGGQGVFAVAR 301


>gi|332307145|ref|YP_004434996.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174474|gb|AEE23728.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 309

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 10/229 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   + R  +    +  ++    F  +   +      PR     L++   A 
Sbjct: 73  LTQTEKRDIATLVQRRAQERIPLPYLINQAWFCGLPFYVDERVLIPRSPFAELIEDKFAA 132

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILDL TG G + +AL           VDIS +ALE+A+ N   + +SE
Sbjct: 133 WV----TVPPTHILDLCTGGGCIAIALAYAFEDATVDAVDISTEALEVAEMNINEHQLSE 188

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD   +++G  +D+I+SNPPY+++  +  L  E    +P ++L  G DGL    
Sbjct: 189 RVYPIQSDLLDALQGQKYDLIISNPPYVDAEDMADLPDEF-HHEPELALAAGDDGLDLVH 247

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            +    + HL  +G   VE+G +Q   +  ++    L  V   +  GG+
Sbjct: 248 KMLRQAAAHLTDEGWLFVEVGNSQ-FHMGHVYPDLNLQWVEFTR--GGH 293


>gi|145298911|ref|YP_001141752.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aeromonas salmonicida subsp. salmonicida A449]
 gi|142851683|gb|ABO90004.1| adenine-specific methylase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 313

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 11/235 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   I+R ++       +     +      +      PR     +V +  A 
Sbjct: 70  LTTSERHRIAELIIRRVQERVPAAYLTNKAWYAGWEFYVDERVLIPRSPIAEMVANRFAP 129

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    K +  RI+DL TG+G + + +  E P  +   +DIS  AL +A+ N   +G+ +
Sbjct: 130 FL----KHEPTRIMDLCTGSGCIAIIMAHEFPDAEVDAIDISVDALNVAERNITDHGLEQ 185

Query: 149 RFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   ++SD    +     +D+IVSNPPY++S  +  L  E R  +P ++L  G DGL   
Sbjct: 186 QVIPIRSDLMRDLPVGDKYDLIVSNPPYVDSEDMSDLPQEFR-HEPELALASGSDGLKLT 244

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + +    +  L  DG+  VE+G N  + +   F       V      GG+   ++
Sbjct: 245 KRLLANAADFLKDDGVLVVEVG-NSMIHLEAQFPEVPFTWVEFEN--GGHGVFVM 296


>gi|258647711|ref|ZP_05735180.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC
           51259]
 gi|260852548|gb|EEX72417.1| protein-(glutamine-N5) methyltransferase [Prevotella tannerae ATCC
           51259]
          Length = 280

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 103/265 (38%), Gaps = 20/265 (7%)

Query: 4   LRDSHSFL----CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
            R++ +          G     +  D  S L   ++      + R    E +  +LG   
Sbjct: 31  AREAQAIAFLVCEEAFGWRKTDIYADKVSQLSTAEQERAAFMLRRLGAGEPVQYVLGATY 90

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F      +S     PRPETE LV  A   +  +         LD+GTG+G + ++L    
Sbjct: 91  FDGRPFYVSPAVLIPRPETEELVRWAAEAARGQ-------HFLDVGTGSGCIAISLKLRR 143

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P       DIS +A+++A  NA   G   +F+    D F++      V+VSNPPYI    
Sbjct: 144 PEASVHAWDISPEAIDVACKNAECLGADVQFEV--QDLFTAPPKSATVVVSNPPYICEKE 201

Query: 180 VDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   V +F+P  +L     D L +Y+ +A   +          VEI    +      
Sbjct: 202 RAEMAAHVVNFEPVQALFVPDDDPLRYYKALAQLGAE------EVFVEINAALRQATADA 255

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F +     +   KD  G DR +  C
Sbjct: 256 FRAAGYQQIVCRKDEFGKDRFIYAC 280


>gi|120405292|ref|YP_955121.1| HemK family modification methylase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119958110|gb|ABM15115.1| modification methylase, HemK family [Mycobacterium vanbaalenii
           PYR-1]
          Length = 272

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 112/265 (42%), Gaps = 14/265 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              D+      VTG    +V  V PD     R        +    +   +  + G   F 
Sbjct: 17  PRVDAELLAAHVTGTERGRVAFVQPDDAFAAR----YRELVTARAERVPLQHLTGTAAFG 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V + +    F PRPETE +++ A+A  LP        RI+DL TG+GA+ LAL    P 
Sbjct: 73  PVTVQVGPGVFVPRPETESVLEWAVAQPLPA-----RPRIVDLCTGSGALALALAVAFPA 127

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            +   VD S  AL+ A+ N   + V   R D       + ++G  D++V+NPPYI +   
Sbjct: 128 AQVTAVDDSEAALDYARGNVADSSVQLVRADVTAPGLLADLDGSVDLLVANPPYIPAG-- 185

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF- 239
             L  EV  +DP  +L GG DG+S    I D  +R L   G C+VE         V  F 
Sbjct: 186 ALLEPEVAQYDPAHALFGGADGMSVIGPIVDAAARLLRPGGRCAVEHDDTTSEQTVAAFT 245

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  V A  D  G  R +   R
Sbjct: 246 RDGGFVDVTARHDLAGRPRFVTAVR 270


>gi|332088462|gb|EGI93580.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Shigella boydii 5216-82]
          Length = 310

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +     +    ILD+ TG+G + +      P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNKFAGLIS----KQPQHILDMCTGSGCIAIVCAYVFPDAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 PDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR- 224

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I    + +L  DG+   E+G N  V ++  +       +  
Sbjct: 225 HEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVG-NSMVHLMEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  +
Sbjct: 284 --D-NGGDGVFMLTK 295


>gi|169824786|ref|YP_001692397.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC
           29328]
 gi|167831591|dbj|BAG08507.1| putative rRNA or tRNA methytransferase [Finegoldia magna ATCC
           29328]
          Length = 263

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 131/259 (50%), Gaps = 9/259 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L ++   +    I+  +  +++     +        +   I  ILG++ FYN + 
Sbjct: 14  DCLMILEKLYNYNFSDSIIHSNDKINENDEKTILEYKKLYDEDIPIEYILGFKYFYNRKF 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
              S    PR +TE+LVD  +         R    IL++G G+G + + L  E    K +
Sbjct: 74  YTDSSVLIPRFDTEILVDEIIKI------NRKFENILEIGIGSGIISITLNLEL-NSKVL 126

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDI+ KA+E++K NA +   +   + + SD + +V   FD+IVSNPPYI+    + L  
Sbjct: 127 GVDINKKAIELSKKNAESLNAT-NVEFIYSDLYENVNYKFDLIVSNPPYIDKKDFNSLET 185

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++   +PR +L GG DGL  YR I +  S +LN+DG+ + EIGYNQ+  +  I +     
Sbjct: 186 KILK-EPRSALFGGDDGLYFYRKIINQASDYLNEDGMLAFEIGYNQRESIFEILDENGFE 244

Query: 246 LVNAFKDYGGNDRVLLFCR 264
                KD+ G DRV++  R
Sbjct: 245 NHYCIKDFNGFDRVIIARR 263


>gi|187928350|ref|YP_001898837.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Ralstonia pickettii 12J]
 gi|187725240|gb|ACD26405.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Ralstonia pickettii 12J]
          Length = 300

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 106/266 (39%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 39  NAYDEAAYLILHTLHLPIDTLEPFLDARLLPEEVAAVLKVIERRAVDRVPAAYITHEAFM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  +      PR     L++  L   +   ++     +L+L TG+G + +    + P
Sbjct: 99  HGMRFYVDERVIVPRSFIGELLEDGLEPWID--QEDGPTDVLELCTGSGCLSILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A  N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 157 NATIDAVDLSPDALVVANRNVDEYRLQDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNEA 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +P ++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPHMALAGGNDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGEDQVFLVTR 297


>gi|254506930|ref|ZP_05119069.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus 16]
 gi|219550215|gb|EED27201.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio parahaemolyticus 16]
          Length = 310

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 100/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   + R  +      +     F  +   +      PR     L+ +   
Sbjct: 67  RLTSSERLRVVERVVKRINERTPTAYLTNRAWFCGLEFFVDERVLVPRSPIGELIQAEFQ 126

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 127 PWLI----EEPGRIMDLCTGSGCIAIACAHAFPDAEVDAIDISTDALQVAEQNIQDHGME 182

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +++IVSNPPY++   ++ L  E    +P + L  G DGL   
Sbjct: 183 QQVFPIRSDLFRDLPKEQYNLIVSNPPYVDEEDMNSLPEEF-THEPELGLAAGTDGLKLV 241

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I      +L ++G+   E+G N  + ++  +       +      GG+  V +  R
Sbjct: 242 RRILANAPDYLTENGILICEVG-NSMIHMMEQYPHIPFTWLEFEN--GGHG-VFMLTR 295


>gi|183599681|ref|ZP_02961174.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
 gi|188021935|gb|EDU59975.1| hypothetical protein PROSTU_03170 [Providencia stuartii ATCC 25827]
          Length = 310

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSVLDDR----QRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D PD +L  R    +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPTLYLPLDVPDELLTSRLTPTERHRIIERVLRRINERVPVAYLTNCSWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++     L      +   ILD+ TG+G + +A   E P  +   VDIS
Sbjct: 110 VLIPRSPIGELINNHFVGLL----ADEPRTILDMCTGSGCIAIACAYEFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
              L + + N   +G+  R   ++SD F  +    +D+IV+NPPY+++  +D L  E R 
Sbjct: 166 TDVLAVTEHNIANHGLEHRVIPIRSDLFRDMPDVKYDLIVTNPPYVDAEDMDDLPEEFRV 225

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P ++L  G DGL   R I     R L+ +G+   E+G N  V ++  +       +  
Sbjct: 226 -EPELALAAGSDGLKLVRRILANAPRFLSDEGVLICEVG-NSMVHLIEQYPEIPFIWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
              YGG D V +  R
Sbjct: 284 E--YGG-DGVFMLTR 295


>gi|297582016|ref|ZP_06943935.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297533711|gb|EFH72553.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 314

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 10/238 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +    +   +   I R      +  +     F  +   +      PR     L+ +   
Sbjct: 71  RLTSSERLRVVERVIKRINDRTPVAYLTNKAWFCGLEFFVDQRVLVPRSPIGELIQNRFE 130

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L      +  RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ 
Sbjct: 131 PWLI----EEPTRIMDLCTGSGCIAIACANAFPEAEVDAIDISVDALQVAEQNIQDHGLE 186

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++   ++SD F  +    +D+IV+NPPY++   +D L  E R  +P + L  G DGL   
Sbjct: 187 QQVFPIRSDLFRDLPQEQYDLIVTNPPYVDQEDMDSLPSEFR-HEPELGLAAGSDGLKLA 245

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I    S +L ++G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 246 RRILANASLYLKENGVLVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 299


>gi|283832238|ref|ZP_06351979.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Citrobacter youngae ATCC 29220]
 gi|291071879|gb|EFE09988.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Citrobacter youngae ATCC 29220]
          Length = 310

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+++  A 
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELINNRFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL + + N   +G+  
Sbjct: 128 LVSEQPQ----HILDMCTGSGCIAIACAYAFPEAEVDAVDISTDALAVTEHNIEEHGLIH 183

Query: 149 RFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F   ++  +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R
Sbjct: 184 HVTPIRSDLFRDLLKVQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGSDGLKLTR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  +G+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 243 RILGNAPDYLADNGILICEVG-NSMVHLIEQYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|154148971|ref|YP_001406204.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
 gi|153804980|gb|ABS51987.1| bifunctional methyltransferase [Campylobacter hominis ATCC BAA-381]
          Length = 262

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 15/258 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L      S   +I++ D  LD+         I +    + +  I    +F+     
Sbjct: 20  AREILKFDRKFSDTDLILNLDKELDEN--SKFWEFIEKFQNGKPLAYITNEVEFFGEIFF 77

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PR ETE+LV+ +L      ++     +IL++GTG+G + + L K     + + 
Sbjct: 78  VDESVLIPRFETEILVNKSLEI----LKNFKAPKILEIGTGSGIISIMLKKNIKDAEILA 133

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           VDIS KAL+ A  NA  +GV    D   SD F +VEG FD++VSNPPYI       L   
Sbjct: 134 VDISKKALKTAIKNAKFHGVE--IDFKISDLFENVEGNFDLVVSNPPYIAQDYP--LDDY 189

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V   +P  +L GG +G      + +  +         + EIGY+QK  + +         
Sbjct: 190 VLK-EPETALIGGKNGSEILINLINQSANRTK---FLACEIGYDQKEILKKELVKNGFK- 244

Query: 247 VNAFKDYGGNDRVLLFCR 264
              +KD  G DR     +
Sbjct: 245 AQFYKDLAGFDRGFTAKK 262


>gi|119964526|ref|YP_946101.1| HemK family modification methylase [Arthrobacter aurescens TC1]
 gi|119951385|gb|ABM10296.1| putative modification methylase, HemK family [Arthrobacter
           aurescens TC1]
          Length = 294

 Score =  209 bits (532), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 1/209 (0%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   + + L  + +  I+GW DF   R+++    F PR  TE LV  A   + P +  
Sbjct: 67  EQLNRMVDQRLSGQPLEHIVGWADFCGKRMSVGPGVFVPRRRTEFLVREAAMIAKP-LTA 125

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++DL  G+GA+  AL       +    DI   A++ A+ N    G +     L  
Sbjct: 126 RRRAVVVDLCCGSGAIGAALNDLLGSCELHAADIDPAAVQCARRNVEPRGGTVHHGDLYG 185

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                + G  D++++N PY+ +  +  +  E R  +PR++LDGG DGL   R IA G ++
Sbjct: 186 ALPRELRGKVDILLANAPYVPTESIGMMPPEARLHEPRVALDGGADGLDVQRRIALGAAQ 245

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            L   G   +E    Q ++  RI      
Sbjct: 246 WLGPGGAVVMETSGQQALETARILGEAGF 274


>gi|317177824|dbj|BAJ55613.1| protoporphyrinogen oxidase [Helicobacter pylori F16]
          Length = 276

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVRFFEWVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              +IS KALE+A  N     + ER    ++  +  +     +++SNPPYI       L 
Sbjct: 139 HASEISLKALEVASKNIERFNLKERIFLKKTHLWDRMP-TVQMLISNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD+ G DR  + 
Sbjct: 253 -DAEFYKDWSGFDRGFIG 269


>gi|54295143|ref|YP_127558.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila str. Lens]
 gi|53754975|emb|CAH16463.1| hypothetical protein lpl2223 [Legionella pneumophila str. Lens]
 gi|307611143|emb|CBX00787.1| hypothetical protein LPW_24911 [Legionella pneumophila 130b]
          Length = 310

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 13/252 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSL-KHESIHRILGW 57
            A  D  S + R   L      VDP   ++ L   +R  L N + + + +   +  ++  
Sbjct: 46  NAWDDMRSLILRSLSLP---YDVDPFLLNARLTTSERKHLCNQLDKRINQRVPVPYLIKE 102

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F ++   +      PR     L+++  +   P IE   V  +LDL TG+G + +A   
Sbjct: 103 AYFCDLPFYVDERVLIPRSPIGELINNQFS---PWIEAEQVHHVLDLCTGSGCIAIACCY 159

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
             P  +   VDIS +AL +A  N   + V ++   ++SD F+++ G  +D+IVSNPPY+ 
Sbjct: 160 AFPEAQVDAVDISNQALAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVG 219

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  L  E R  +P ++L+ G +GL+    I      +L++ G+  VE+G N +  + 
Sbjct: 220 KEEMQTLPDEYR-HEPVLALETGNNGLAIIEKILKNAHAYLSEHGILVVEVG-NSEEALC 277

Query: 237 RIFESRKLFLVN 248
             +       + 
Sbjct: 278 ETYPMVPFTWLE 289


>gi|145639279|ref|ZP_01794885.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII]
 gi|145271582|gb|EDK11493.1| N5-glutamine methyltransferase [Haemophilus influenzae PittII]
 gi|309751156|gb|ADO81140.1| 50S subunit L3 protein glutamine methyltransferase [Haemophilus
           influenzae R2866]
          Length = 314

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|56479090|ref|YP_160679.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aromatoleum aromaticum EbN1]
 gi|56315133|emb|CAI09778.1| Adenine specific methylase, HemK family [Aromatoleum aromaticum
           EbN1]
          Length = 311

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 9/241 (3%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
             D+ +   +R  L   I R          I G     + R  +      PR     L++
Sbjct: 72  FLDACITTGERESLFAVIERRAAERVPAAYITGEAWLGDFRFQVDERVIVPRSFFAELLE 131

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              A  +   E+  V   LDL TG+G + + +    P  + VG D+S +AL++A++N   
Sbjct: 132 DGFAPWIDDAER--VTSALDLCTGSGCLAILMAHAFPNAQIVGADLSDEALQVARANVSD 189

Query: 144 NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             + +R + L+SD F+ + G  FD+I+SNPPY+ +  +  L  E    +PR++L  G DG
Sbjct: 190 YDLDDRVELLKSDVFAGLAGRRFDLIISNPPYVTADAMATLPPEYL-HEPRMALAAGEDG 248

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L   R +  G   HLN  G+ +VE+G+N +  V   F       ++A    GG+D V + 
Sbjct: 249 LDIVRRLLAGAKAHLNPGGMLAVEVGHN-RYLVEEAFPDLSPVWLSA---QGGDDMVFVL 304

Query: 263 C 263
            
Sbjct: 305 R 305


>gi|314923483|gb|EFS87314.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL001PA1]
 gi|314966527|gb|EFT10626.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL082PA2]
 gi|327327351|gb|EGE69127.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL103PA1]
          Length = 291

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I    + ++          + R    E    I+G   F  
Sbjct: 25  PAADARMLLCGALRIQPSQLI--RVTSVNADDEDRFNQMVDRRRGGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FD++V+NPPY+     
Sbjct: 143 RVSAVEVDDAALMWTRRNLGDSG----VEVLTGDALRVPDDGRRFDIVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
                  +    D  G  R +   R
Sbjct: 259 ISDMWEQIEDHDDLAGRPRFVTARR 283


>gi|158604957|gb|ABW74773.1| bifunctional methyltransferase [Campylobacter concisus 13826]
          Length = 270

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 14/257 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R +   L     +S   + ++  S  D+         + R   +E +  I G   FY
Sbjct: 20  NPSRVAKILLMSYLDVSIEWIFLNQKSECDE---SGYFALVKRFENYEPLEYITGKAGFY 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   + S    PRPETE+LVD  L  +          +I ++GTG+G + + L  ++  
Sbjct: 77  GLEFEVESGVLIPRPETEILVDKVLEIA----SSYKAPKIAEIGTGSGIISVMLALKT-N 131

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K V  DI+ KAL +AK NA+   VS++ + ++  +   + G  D++VSNPPYI      
Sbjct: 132 AKIVATDINEKALNLAKKNALKFNVSDKIEFIKCSYIDEISGDIDILVSNPPYIARDYK- 190

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V + +P  +L GG  G    + I         K+   + E+GY+Q+V +    + 
Sbjct: 191 -LDKFVIN-EPHEALFGGEIGDEILKNIILIARNRDIKN--IACEMGYDQRVSMEMALKF 246

Query: 242 RKLFLVNAFKDYGGNDR 258
                   +KD  G DR
Sbjct: 247 NGFKSA-FYKDLAGFDR 262


>gi|292490418|ref|YP_003525857.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
 gi|291579013|gb|ADE13470.1| modification methylase, HemK family [Nitrosococcus halophilus Nc4]
          Length = 312

 Score =  208 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIV-DPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
            A+ ++ + +     L    +      + L +R++  +   + R ++       +     
Sbjct: 40  NAIDEATTLVLHALHLPPQNLPAEFFGAHLTEREKRQILTLLERRIRERIPAPYLTHEAW 99

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +      PR     L++       P +    V  +LDL TG+G + +A     
Sbjct: 100 FAGLSFYVDERVLIPRSPLAELIEQ---RFTPFVSPERVHTLLDLCTGSGCIAIAATYAF 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
           P  +    DIS +AL +A+ N   +G+ ++  TL S+ F  + E  +D+IVSNPPY+   
Sbjct: 157 PQAQVDATDISQEALAVARLNIERHGLQDQVHTLPSNLFEGLKERRYDLIVSNPPYVGET 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PR +L+   +GLS    I      HLN+ G+  VE+G ++     R+
Sbjct: 217 ELASLPKEY-HHEPRQALEAEDEGLSLVLQILLQAPDHLNEQGILIVEVGNSEAALTRRL 275

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   +   +   G   V L  R
Sbjct: 276 -PEVPFLWLEFER---GGYGVFLLTR 297


>gi|329297421|ref|ZP_08254757.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Plautia stali symbiont]
          Length = 310

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+++  A 
Sbjct: 68  LTASERHRIVERVIRRVNERIQVAYLTNKAWFCGHEFYVDKRVLVPRSPIGELIENRFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    +     ILD+ TG+G + +A     P  +   VDIS  AL +A+ N   +G+  
Sbjct: 128 LIDGAPR----HILDMCTGSGCIAIACAYVFPEAEVDAVDISTDALAVAEQNIEEHGLLH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               +++D F ++    +D+IV+NPPY+++  +D L  E R  +P + L  G DGL   R
Sbjct: 184 HVTPIRADLFRNLPQVKYDLIVTNPPYVDAEDMDDLPNEYR-HEPELGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L++ G+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RILACAPDYLSEQGVLICEVG-NSMVHMMEQYPDVPFTWLEF--D-NGGDGVFMLTR 295


>gi|207743262|ref|YP_002259654.1| methylase/methyltransferase protein [Ralstonia solanacearum
           IPO1609]
 gi|206594659|emb|CAQ61586.1| methylase/methyltransferase protein [Ralstonia solanacearum
           IPO1609]
          Length = 304

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 43  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAFM 102

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + VR  +      PR     L+++ L   +P   +     +L+L TG+G + +    + P
Sbjct: 103 HGVRFYVDERVIVPRSFIGELLENGLDPWIPH--EDGPTDVLELCTGSGCLAILAALQWP 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+   
Sbjct: 161 NATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 220

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 221 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 278

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 279 FPDLDLVWLPT---SAGEDQVFLVTR 301


>gi|238753805|ref|ZP_04615166.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC
           29473]
 gi|238708041|gb|EEQ00398.1| Uncharacterized adenine-specific methylase [Yersinia ruckeri ATCC
           29473]
          Length = 314

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  +   ++R +     +  +     F      +      PR     L+++ 
Sbjct: 69  NARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGQEYYVDERVLVPRSPIGELIENR 128

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               +P         ILD+ TG+G + +A     P  +   VDIS   L + + N   +G
Sbjct: 129 FEALIPHQPN----HILDMCTGSGCIAIACAYAFPEAEVDAVDISADVLAVTEHNIQQHG 184

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V  +   ++SD F  +    +D+IV+NPPY++   +  L  E R F+P + L  G DGL+
Sbjct: 185 VEHQVTPIRSDLFRDLPPIKYDLIVTNPPYVDEEDMSDLPQEFR-FEPELGLAAGFDGLT 243

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I       L  DG+   E+G N  V ++  +       +       G D V +  +
Sbjct: 244 LARRILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEFN---NGGDGVFMLTK 299


>gi|184200615|ref|YP_001854822.1| protein methyltransferase HemK [Kocuria rhizophila DC2201]
 gi|183580845|dbj|BAG29316.1| protein methyltransferase HemK [Kocuria rhizophila DC2201]
          Length = 289

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 98/242 (40%), Gaps = 10/242 (4%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
            +  ++L   +       + R    E +  I G   F  + L +    F PRPETELLV 
Sbjct: 43  TEARAILGSPEPEGYRELVHRRAAREPLQHITGTAPFRQLELAVGPGVFVPRPETELLVQ 102

Query: 84  SALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            AL  +    E  +V   ++DLGTG+GA+ LA+  E P  +   V+    AL   + N  
Sbjct: 103 LALDHARAWREAGEVHPAVIDLGTGSGAIALAVASEDPACRVTAVEREPAALAWTRRNLA 162

Query: 143 TNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                 R   L+ D+        G F V+V+NPPY+    V     EVR+ DP  +L GG
Sbjct: 163 ----GTRVRLLECDYRDVSVPTAGRFCVVVTNPPYVPETDVPR-DPEVREHDPATALYGG 217

Query: 200 I-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
              G+ H     D   R L   G   +E   +Q   V      R    V   +D     R
Sbjct: 218 DATGMRHPLAAMDTAVRVLRPGGSFIMEHAESQVEAVAHALRERSFRNVELHRDLTDRPR 277

Query: 259 VL 260
             
Sbjct: 278 AT 279


>gi|262277607|ref|ZP_06055400.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [alpha proteobacterium HIMB114]
 gi|262224710|gb|EEY75169.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [alpha proteobacterium HIMB114]
          Length = 284

 Score =  208 bits (531), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 4   LRDSHSFLCRVTGL-SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             D+   L  V    +   + ++ +  L++ +R      I + +  + I +I+  + F+N
Sbjct: 22  KLDTEVLLAHVLKKKNRLDLFLNTEEELNNEERDKFEVFINQRISKKPISKIINQKSFWN 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +S     PRPETE+L++         I K+  ++ LD+G G+G + ++LL++    
Sbjct: 82  FDLDVSKKVLIPRPETEVLIEMV----TKEINKKKNLKFLDIGCGSGCISISLLEQYKKS 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVD 181
            G G+DIS  A+   K N     +  R   L+ + F    +  FD+I+SNPPY++     
Sbjct: 138 VGTGIDISKDAIVNTKINLSNYNLINRIKLLRKNIFIYKTDKKFDLIISNPPYLKLSDYI 197

Query: 182 CLGLEVRDFDPRISLDGGI-DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
            L   ++ ++P+ +L G   +GL  Y+ I      ++  +G  + EIG NQ + + ++  
Sbjct: 198 SLDPGIKKYEPKEALIGDNKEGLRFYKEIIKKFKNNIKLNGYLAFEIGDNQFMQINKLLI 257

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                +V+ +K      R LL  +
Sbjct: 258 LNGFIVVSKYKLINNQIRCLLAKK 281


>gi|315103526|gb|EFT75502.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL050PA2]
          Length = 291

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I    + ++          + R    E    I+G   F  
Sbjct: 25  PAADARMLLCGALRIQPSQLI--RVTSVNADDEDRFNQMVDRRRGGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FD++V+NPPY+     
Sbjct: 143 RVSAVEVDDAALMWTRRNLGDSG----VEVLTGDALRVPDDGRRFDIVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSVPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
                  +    D  G  R +   R
Sbjct: 259 ISDMWEQIEDHDDLAGRPRFVTARR 283


>gi|207723342|ref|YP_002253741.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2]
 gi|206588540|emb|CAQ35503.1| methylase/methyltransferase protein [Ralstonia solanacearum MolK2]
          Length = 304

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 43  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAFM 102

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + VR  +      PR     L+++ L   +P   +     +L+L TG+G + +    + P
Sbjct: 103 HGVRFYVDERVIVPRSFIGELLENGLDPWIPH--EDGPTDVLELCTGSGCLAILAALQWP 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+   
Sbjct: 161 NATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 220

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  +EIG N++ +V   
Sbjct: 221 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVIEIG-NERENVEAA 278

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 279 FPDLDLVWLPT---SAGEDQVFLVTR 301


>gi|68249747|ref|YP_248859.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 86-028NP]
 gi|68057946|gb|AAX88199.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae 86-028NP]
          Length = 314

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRIPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|88860367|ref|ZP_01135005.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas tunicata D2]
 gi|88817565|gb|EAR27382.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas tunicata D2]
          Length = 311

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 8/237 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   ++  L   +   + +   +  +     F      +      PR     L++  
Sbjct: 70  NTRLTQSEKETLAQVVAERVNNRTPVAYLTNQAWFAGSPFYVDERVLIPRSPFAELIEKR 129

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  L   E + V RILD+ TG+  + +AL ++    +   VDIS  AL++A  N     
Sbjct: 130 FAPWLS--EDQAVHRILDMCTGSACIAIALAEKFDDAQVDAVDISTDALDVADINISDYQ 187

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V +R   +QSD FS V G  +D+I++NPPY+++  +  L  E    +P + L  G+DGL 
Sbjct: 188 VEDRVFPIQSDVFSGVIGQKYDLIIANPPYVDAEDMADLPNEF-HHEPELGLASGVDGLD 246

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R I  G + HLN +GL  VE+G N  V +  I+ + +   ++  K  GG    ++
Sbjct: 247 VTRRILAGAAEHLNDNGLLFVEVG-NSMVHMEDIYPNAEFEWIDFEK--GGLGVFVI 300


>gi|218296520|ref|ZP_03497248.1| modification methylase, HemK family [Thermus aquaticus Y51MC23]
 gi|218243062|gb|EED09594.1| modification methylase, HemK family [Thermus aquaticus Y51MC23]
          Length = 272

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 9/247 (3%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
               +++                 + R L    +  +LG  +F+ + L ++     PRPE
Sbjct: 33  PRKALLLRLSEPPPPGAEARARELLKRRLSGYPLQYLLGEVEFFGLPLKVAEGVLIPRPE 92

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV+ AL+  LP        R+LD+GTGTGA+ LAL +  P  +    ++  +AL +A
Sbjct: 93  TEGLVELALSLPLP-----PRPRVLDVGTGTGAIALALKRHLPEAEVHATEVDPRALALA 147

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + NA   G+      L++     + GL D+IVSNPPY+     +    E   F+  ++L 
Sbjct: 148 EENARRLGLP--VHFLKAPLTGGLRGL-DLIVSNPPYLPEAYREVAPKE-LAFENPLALY 203

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
            G +GL   R +A      L   G   +E+       +     +     V   +D  G +
Sbjct: 204 AGPEGLDVARPLAGEAWEALRPGGFLLLELAPENVGLMAEELGAMGFQEVAVLRDLLGRE 263

Query: 258 RVLLFCR 264
           R L   R
Sbjct: 264 RYLRARR 270


>gi|145633068|ref|ZP_01788800.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655]
 gi|144986294|gb|EDJ92873.1| N5-glutamine methyltransferase [Haemophilus influenzae 3655]
          Length = 314

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGHDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  V ++  +       V 
Sbjct: 248 NITKQILKLAPNYLTENGVLVCEVG-NSMVSLIEQYPDVPFKWVE 291


>gi|289643111|ref|ZP_06475241.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
 gi|289507075|gb|EFD28044.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
          Length = 375

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 30/287 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+       TG    ++ +     +   +R  L   + R      +  ++G   F  
Sbjct: 72  PRADAEQLAAHATGEPRWRLALAG--AMTPAERELLHGLVARRAARVPLQHLVGTVGFRY 129

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+    F PRPETE +V  A+         R V   +DL TG+GA+ LAL  E P  
Sbjct: 130 LTLTVGPGVFVPRPETETVVGWAIDTVRAAGWDRPVC--VDLCTGSGAIALALADELPGA 187

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-------------------------SDW 157
           +   VD    AL  AK N V  G +                                ++ 
Sbjct: 188 RVYAVDSDPDALLWAKRNVVLTGRAITVHHADVGIDLSGGAASRHGGTPGAAGVMAATEV 247

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            + + G  D++VSNPPY+       L  EV D DP  +L GG DGL+  R +A   +  L
Sbjct: 248 LADLLGRVDLVVSNPPYLCDDERGTLEPEVGDHDPPAALWGGPDGLAGVRAVAAVAADLL 307

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFC 263
              G   +E           +  +      V+  +D  G DR +   
Sbjct: 308 RDGGRLVIEHADRHGSAAPALLRTHGRWDDVHDHQDLTGRDRFVTAT 354


>gi|32266847|ref|NP_860879.1| DNA methylase HemK [Helicobacter hepaticus ATCC 51449]
 gi|32262899|gb|AAP77945.1| possible DNA methylase HemK [Helicobacter hepaticus ATCC 51449]
          Length = 279

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   +S   L  + G+    +       ++          I    K + I  I     F
Sbjct: 25  LKPRYESEILLSFLLGVPRTYLHTHSAQNIESTLAQRFYTLINERAKGKPIEYITRQASF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y     +      PRPETE+L+D A       I+   V  I ++G G+G +   L    P
Sbjct: 85  YERSFYVDERVLIPRPETEILIDKANEI----IKGEKVNFIAEVGVGSGIITTTLAIMHP 140

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DIS +ALE++K N  T   +            +      +I+SNPPYI+    
Sbjct: 141 QCYFFATDISEQALEVSKLNIATYAPNANITLQCCSLLPAHINP-QLIISNPPYIKDDYP 199

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                    ++P+I+L GG DGL   +++ +  +    +      EIGY+QK  +  I  
Sbjct: 200 ISAP---LHYEPKIALFGGKDGLGILKSLINECA---TRKVWLLCEIGYDQKDALEHILL 253

Query: 241 SRKLFLVNAFKDYGGNDR 258
             +   +  +KD  G DR
Sbjct: 254 QSRAKNITFYKDLSGWDR 271


>gi|226954021|ref|ZP_03824485.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
 gi|226835232|gb|EEH67615.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ATCC 27244]
          Length = 336

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWKADAEIL----------------DAKLLPSEKAEFLSLLERRINERVPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMLEALNSLPENPKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD FS +  E
Sbjct: 164 CTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQYQVALLESDLFSKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     ++  K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTIDFHWLSFQK 310


>gi|313112841|ref|ZP_07798488.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624911|gb|EFQ08219.1| protein-(glutamine-N5) methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 324

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 70/305 (22%), Positives = 116/305 (38%), Gaps = 51/305 (16%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+        G  +       D VL   +   L     R  + E +  + G   F 
Sbjct: 26  DADYDARELFRVAAGRDARL----SDRVLTTEEAEKLEALCTRREQREPLQYLCGIWSFL 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  L +      PR +TE++ ++A       +      R+LDL  GTG + L + +  P 
Sbjct: 82  DFDLAVGPGVLCPRADTEVVAEAA----ANTLTGIAAPRVLDLCAGTGCLGLGVKRFCPA 137

Query: 122 FKGVGVDISCKALEIAKSNA--------------------------------VTNGVSER 149
            +   V+ S +A    + N                                   N +  +
Sbjct: 138 AQVTCVEKSPEAFVYLEKNCRCALKGQGGQTEDLLEPTAFEQADAPAFDWGPALNALRAK 197

Query: 150 ------FDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                    ++ D F+      EG  D+IVSNPPY+ +  +  L  EV   +P ++L+ G
Sbjct: 198 AKPAYAVQPVEGDLFTYWQGLPEGQLDLIVSNPPYLTAEEMRHLQPEVAQ-EPAMALEAG 256

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DGL  YR +A+     L   G   +EIG+ Q+  V  +  +     +   KD+GGNDR 
Sbjct: 257 KDGLVFYRALAEHYQNALRPGGALVLEIGWQQRQAVAALLAANGWADIECRKDFGGNDRC 316

Query: 260 LLFCR 264
           ++  R
Sbjct: 317 MIAHR 321


>gi|108808088|ref|YP_652004.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Antiqua]
 gi|108812358|ref|YP_648125.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|145599288|ref|YP_001163364.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides F]
 gi|149365224|ref|ZP_01887259.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis CA88-4125]
 gi|153947313|ref|YP_001400383.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis IP 31758]
 gi|162420900|ref|YP_001604986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Angola]
 gi|165925296|ref|ZP_02221128.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937109|ref|ZP_02225674.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008087|ref|ZP_02228985.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214242|ref|ZP_02240277.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398823|ref|ZP_02304347.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421362|ref|ZP_02313115.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424480|ref|ZP_02316233.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167469289|ref|ZP_02333993.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis FV-1]
 gi|170023754|ref|YP_001720259.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis YPIII]
 gi|186896033|ref|YP_001873145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pseudotuberculosis PB1/+]
 gi|218929822|ref|YP_002347697.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis CO92]
 gi|229838317|ref|ZP_04458476.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229895347|ref|ZP_04510520.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Pestoides A]
 gi|229898882|ref|ZP_04514027.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229902717|ref|ZP_04517834.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Nepal516]
 gi|270490110|ref|ZP_06207184.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pestis KIM D27]
 gi|294504663|ref|YP_003568725.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
 gi|108776006|gb|ABG18525.1| hypothetical protein YPN_2196 [Yersinia pestis Nepal516]
 gi|108780001|gb|ABG14059.1| hypothetical protein YPA_2093 [Yersinia pestis Antiqua]
 gi|115348433|emb|CAL21369.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145210984|gb|ABP40391.1| hypothetical protein YPDSF_2010 [Yersinia pestis Pestoides F]
 gi|149291637|gb|EDM41711.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis CA88-4125]
 gi|152958808|gb|ABS46269.1| methyltransferase, HemK family [Yersinia pseudotuberculosis IP
           31758]
 gi|162353715|gb|ABX87663.1| methyltransferase, HemK family [Yersinia pestis Angola]
 gi|165914972|gb|EDR33584.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922903|gb|EDR40054.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992469|gb|EDR44770.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204598|gb|EDR49078.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960851|gb|EDR56872.1| methyltransferase, HemK family [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051327|gb|EDR62735.1| methyltransferase, HemK family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056362|gb|EDR66131.1| methyltransferase, HemK family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750288|gb|ACA67806.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pseudotuberculosis YPIII]
 gi|186699059|gb|ACC89688.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pseudotuberculosis PB1/+]
 gi|229680164|gb|EEO76263.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Nepal516]
 gi|229688430|gb|EEO80501.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229694683|gb|EEO84730.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229701655|gb|EEO89681.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis Pestoides A]
 gi|262362725|gb|ACY59446.1| hypothetical protein YPD4_2539 [Yersinia pestis D106004]
 gi|270338614|gb|EFA49391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Yersinia pestis KIM D27]
 gi|294355122|gb|ADE65463.1| hypothetical protein YPZ3_2553 [Yersinia pestis Z176003]
 gi|320014548|gb|ADV98119.1| ribosomal protein L3 N5-glutamine methyltransferase [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 310

 Score =  208 bits (530), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELIENRFDG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 128 LIHHQPN----HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +   K   G D V +  +
Sbjct: 243 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEFEK---GGDGVFMLTK 295


>gi|229819783|ref|YP_002881309.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
 gi|229565696|gb|ACQ79547.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
          Length = 296

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 9/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+ + L    G++  +V  +V  D+ L + +R      + R    E +  ILG   F
Sbjct: 27  PRADAETLLASALGVTRAEVRRLVVLDADLPEGRRADFARLVDRRAAREPLQHILGAAPF 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +    F PRPETE++   A+  +           ++DL  G G + LA+  E P
Sbjct: 87  RHLELAVGPGVFVPRPETEVVAQVAIDEAERLAVDDARPLVVDLCCGAGGIALAVDTEVP 146

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
             + V VD++ +A+ + + N    G      E  D   S+  + ++G  DV+VSNPPYI 
Sbjct: 147 ASRVVAVDLAPEAVALTRRNDAAVGTRTMRIEHGDVRDSELLADLDGTVDVVVSNPPYIP 206

Query: 177 SVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               +    EVRD DP ++L  GG+DGL   R +    +R L   GL  +E    Q   V
Sbjct: 207 P-DAEPTEPEVRDHDPDLALYGGGVDGLDVPRAVVLASTRLLRAGGLFVMEHAEVQAAAV 265

Query: 236 VRIFESRK-LFLVNAFKDYGG 255
             +  +           D  G
Sbjct: 266 REVVTASGAFDDAVTLDDLTG 286


>gi|317492688|ref|ZP_07951115.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919438|gb|EFV40770.1| methyltransferase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 310

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+D+    
Sbjct: 68  LTLSERHRIVERVIRRVNDRIPVAYLTNKAWFCGHEFYVDERVLVPRSPIGELIDN---- 123

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               I   +   ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+ +
Sbjct: 124 RFSGIINHNPSHILDMCTGSGCIAIACAYAFPDAEVDAVDISTDVLSVTEQNIQEHGLDQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               ++SD F  +    +D+IV+NPPY++   +  L  E R F+P + L  G DGL   R
Sbjct: 184 SVTPIRSDLFRELPPLQYDLIVTNPPYVDEEDMSDLPEEFR-FEPELGLAAGSDGLKLTR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L  DG+   E+G N  V ++  +       +       G D V +  +
Sbjct: 243 RILACAPDYLTDDGVLICEVG-NSMVHLMEQYPDIPFVWLEFE---NGGDGVFMLTK 295


>gi|293606183|ref|ZP_06688547.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii
           ATCC 43553]
 gi|292815443|gb|EFF74560.1| protein-(glutamine-N5) methyltransferase [Achromobacter piechaudii
           ATCC 43553]
          Length = 316

 Score =  208 bits (530), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 104/243 (42%), Gaps = 10/243 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++         L    +    D+ +   +R  + + + R +        +      
Sbjct: 54  NAWDEAVYLTLHALHLPLDTLEPFLDARVVREERDRVLDLLERRVTERVPAAYLTNEAWL 113

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA  +   +   V  +LD+ TG+G + +      P
Sbjct: 114 RGHRFYVDKRVIVPRSPIAELLDEGLAPWVQ--DPYAVENVLDMCTGSGCLAILGAMAFP 171

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A+ N    G++ER D  +S+ F  +    +DVIV NPPY+ S  
Sbjct: 172 NAHVDAVDVSADALEVARRNVDDYGLAERLDLHESNLFDQLPACQYDVIVCNPPYVNSGS 231

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  E R  +P+++L GG DG+   R I     ++L  +G+  +EIG+         F
Sbjct: 232 MDVLPQEYR-HEPQLALAGGDDGMDLVRRILASAPKYLAPEGVIVLEIGHE-----RDFF 285

Query: 240 ESR 242
           E+ 
Sbjct: 286 EAA 288


>gi|313885112|ref|ZP_07818864.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619803|gb|EFR31240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Eremococcus coleocola ACS-139-V-Col8]
          Length = 283

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
               +    + + +  +LG  +F      +S  T  PR ET  L+D A+ F         
Sbjct: 61  FCRVLEGLSQGQPLQYLLGRANFRGTWYQVSLATLIPREETGGLIDLAIKF----FGDSA 116

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             +ILD+GTGTG + + L K  P  + V  DIS +AL+IA+ NA T  ++   D   SD 
Sbjct: 117 PTQILDIGTGTGILAIELAKVFPQAQVVASDISEEALKIARVNAET--MAIHVDFFLSDV 174

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +V    + +IVSNPPYI    +D +   V +++P ++L    +GL+ Y+ +A  +   
Sbjct: 175 CKTVPKKKYQLIVSNPPYIALDELDLMDPSVINYEPHLALFADQEGLAIYQKLAQELPAF 234

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVL 260
           ++K GL  +EIG+ Q   V  IF+       +   KD+   DR +
Sbjct: 235 IDKQGLILLEIGFRQGQKVAAIFKEAFPQAEITIHKDFYDKDRFV 279


>gi|270262881|ref|ZP_06191152.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13]
 gi|270043565|gb|EFA16658.1| hypothetical protein SOD_c05060 [Serratia odorifera 4Rx13]
          Length = 324

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L++   + 
Sbjct: 82  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEFYVDERVLVPRSPIGELINDHFSA 141

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +P         ILD+ TG+G + +A     P  +   VDIS   L + + N   +GV  
Sbjct: 142 LIPH----PPRHILDMCTGSGCIAIACGYAFPEAEVDAVDISSDVLAVTERNIQAHGVEH 197

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  V    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 198 QVIPIRSDLFRDVPAIQYDLIVTNPPYVDAEDMSDLPQEFR-FEPELGLAAGSDGLKLVR 256

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L+ DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 257 RILACAPDYLSDDGVLICEVG-NSMVHLMEQYPDIPFTWLEF--D-NGGDGVFMLTK 309


>gi|238920643|ref|YP_002934158.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Edwardsiella ictaluri 93-146]
 gi|238870212|gb|ACR69923.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella ictaluri 93-146]
          Length = 310

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+D+  + 
Sbjct: 68  LTLSERHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDGRVLVPRSPIGELIDNRFSG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +      +   ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+ +
Sbjct: 128 LIGH----EPRNILDMCTGSGCIAIACAYAFPQAEVDAVDISSDVLAVTEHNIQQHGLEQ 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY++   +  L  E R  +P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRELPPLRYDLIVTNPPYVDEEDMSDLPDEFR-HEPALGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L+ DG+   E+G N  V ++  +       +    D  G D V +  R
Sbjct: 243 RILACAPDYLSDDGVLICEVG-NSMVHLMAQYPELPFVWLEF--D-NGGDGVFMLTR 295


>gi|317405182|gb|EFV85523.1| adenine-specific methylase [Achromobacter xylosoxidans C54]
          Length = 298

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 10/236 (4%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTL 67
             +     L    +    D+ + D +R  + + I R +        +         R  +
Sbjct: 43  YLVLHALHLPLDTLEPFLDARVLDEERNRVLDLIDRRVTERVPAAYLTNEAWLRGHRFYV 102

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            +    PR     L+D  L+  +   +  D   +LD+ TG+G + +      P+ +   V
Sbjct: 103 DARVIVPRSPIAELLDEGLSPWVQDAQAVD--SVLDMCTGSGCLAILSALAFPYAQVDAV 160

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D+S  ALE+A+ N    G+++R    QSD F S+    +DVIV NPPY+ S  +D L  E
Sbjct: 161 DVSPDALEVARRNVDDYGLADRLALHQSDLFDSLPERQYDVIVCNPPYVNSGSMDVLPQE 220

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            R  +P+++L GG DG+   R I     R+L+++G+  +EIG+         FE+ 
Sbjct: 221 YR-HEPQLALAGGADGMDLVRRILQAAPRYLSENGVLVLEIGHE-----RDFFEAA 270


>gi|52842514|ref|YP_096313.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|148359841|ref|YP_001251048.1| adenine specific methylase [Legionella pneumophila str. Corby]
 gi|296107891|ref|YP_003619592.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy]
 gi|52629625|gb|AAU28366.1| adenine specific methylase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148281614|gb|ABQ55702.1| adenine specific methylase [Legionella pneumophila str. Corby]
 gi|295649793|gb|ADG25640.1| adenine specific methylase [Legionella pneumophila 2300/99 Alcoy]
          Length = 310

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 13/252 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSL-KHESIHRILGW 57
            A  D  S + R   L      VDP   ++ L   +R  L N + + + +   +  ++  
Sbjct: 46  NAWDDMRSLILRSLSLP---YDVDPFLLNARLTTSERKHLCNQLDKRINQRVPVPYLIKE 102

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F ++   +      PR     L+++  +   P IE   V  +LDL TG+G + +A   
Sbjct: 103 AYFCDLPFYVDERVLIPRSPIGELINNQFS---PWIEAERVHHVLDLCTGSGCIAIACCY 159

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
             P  +   VDIS +AL +A  N   + V ++   ++SD F+++ G  +D+IVSNPPY+ 
Sbjct: 160 AFPEAQVDAVDISNQALAVATINCERHDVGDQLALIESDCFTALSGKQYDLIVSNPPYVG 219

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  L  E R  +P ++L+ G +GL+    I      +L++ G+  VE+G N +  + 
Sbjct: 220 KEEMQTLPDEYR-HEPVLALETGNNGLAIIEKILKNAHAYLSEHGILVVEVG-NSEEALC 277

Query: 237 RIFESRKLFLVN 248
             +       + 
Sbjct: 278 ETYPMVPFTWLE 289


>gi|294650372|ref|ZP_06727739.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823785|gb|EFF82621.1| adenine-specific methylase [Acinetobacter haemolyticus ATCC 19194]
          Length = 336

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWKADAEIL----------------DAKLLPSEKAEFLSLLERRINERVPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMLEALNSLPENPKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAIALAYAYPESEVDATDISKEALEVASINTEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFHWLTFQK 310


>gi|134094545|ref|YP_001099620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Herminiimonas arsenicoxydans]
 gi|133738448|emb|CAL61493.1| Modification methylase HemK [Herminiimonas arsenicoxydans]
          Length = 296

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 109/264 (41%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L   ++    D+ L   +   +   I +   +      I      
Sbjct: 35  NALDEAAYLILHTLKLPLDKLDPFFDAHLLQHEVDAVLRVIEQRADERLPAAYITNEGWL 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+    +  +   +K  +  IL+L TG+G + + L    P
Sbjct: 95  GGYHFYVDERVIVPRSFIAELIPDQFSPWVSNPDK--ITNILELCTGSGCLPIMLADAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
             +   VDIS  AL +A+ N     + +R   ++SD ++ V E  +D+I++NPPY+ S  
Sbjct: 153 NAQVDAVDISADALAVARRNVDEYELQDRITLIESDLYTHVPENKYDLIITNPPYVNSTS 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +P I+L GG DG+   R I  G  + L  +GL  VEIG N++      F
Sbjct: 213 MGKLPPEYLR-EPHIALAGGDDGMDLVRKIVAGAGKRLTPNGLLMVEIG-NERAYAEAAF 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  +       G+D V L  
Sbjct: 271 PKLNLTWLTT---SAGDDMVFLVT 291


>gi|332972989|gb|EGK10929.1| protein-(glutamine-N5) methyltransferase [Kingella kingae ATCC
           23330]
          Length = 312

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
            A  ++   +     L    +    D  +LDD +   L     R +    +  +      
Sbjct: 49  NAHDEAAYLILHTLNLPLDTLDPYLDAKLLDDEKEILLDKIYARVVNRVPVAYLTNQAWQ 108

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +    +      PR     L+   L+  +   E   V R LDL TG+G + + + +  P
Sbjct: 109 GDFDFYVDERVIVPRSFIYELLGVPLSPWIEYPEL--VHRALDLCTGSGCLAIQMAEHYP 166

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDIS  ALE+A  N    G+ +R + + +D F  ++G +D+I+SNPPY+++  V
Sbjct: 167 AAEIDAVDISLDALEVAAINVEDYGLQDRINLIHTDLFEGLDGTYDLIISNPPYVDAESV 226

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E    +P ++L  G DGL   R I    +R LN  G+  VEIG+N +  + R + 
Sbjct: 227 AELPEEYL-HEPELALGSGEDGLDATRQILLQAARFLNPQGVLLVEIGHN-RDVLERAYP 284

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 285 ELPFMWLET---SGGDGFVFLLTR 305


>gi|318042638|ref|ZP_07974594.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Synechococcus sp. CB0101]
          Length = 300

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 76/252 (30%), Positives = 122/252 (48%), Gaps = 8/252 (3%)

Query: 21  QVIVDPDSVLDDRQ-RFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           Q+ + PD  ++       L     + L     +  ++G   + ++ L +      PR ET
Sbjct: 44  QLRLYPDQSVELEAPLPRLELLWQQHLNSGTPLQYLVGRCPWRDLELEVQPGALIPRQET 103

Query: 79  ELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           ELLV+ A   L+ S         +   DLGTG+G + +AL +  P  +GV VD S +AL 
Sbjct: 104 ELLVELAEQRLSSSGDAPSGASPLHWADLGTGSGCLAVALGRCWPGSRGVAVDQSSEALA 163

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +A+ N   + + ER +  Q +W++ +    G  D+++SNPPYI + +   L   VRD +P
Sbjct: 164 LAQRNLSKHHLLERVELRQGNWWAPLADWAGQLDLVISNPPYIPTAVWKQLEPTVRDHEP 223

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            ++LDGG DGL   R IA G + HL   G   +E  ++Q   V+ +     L  V+  +D
Sbjct: 224 ALALDGGGDGLEAIRAIAAGAAAHLAPGGWLLLEHHHDQSEAVLALLNGAGLEQVSPHRD 283

Query: 253 YGGNDRVLLFCR 264
             G  R     R
Sbjct: 284 LEGIWRFASGQR 295


>gi|282853791|ref|ZP_06263128.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J139]
 gi|282583244|gb|EFB88624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Propionibacterium acnes J139]
 gi|314981452|gb|EFT25546.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA3]
 gi|315092116|gb|EFT64092.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL110PA4]
          Length = 291

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 9/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   LC    +   Q+I    + ++          + R    E    I+G   F  +RL
Sbjct: 28  DARMLLCGALRIQPSQLI--RVTSVNADDEDRFNQMVDRRRGGEPAQYIIGHAWFRGLRL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  +  
Sbjct: 86  EVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVS 145

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCL 183
            V++   AL   + N   +G     + L  D     +    FD++V+NPPY+       +
Sbjct: 146 AVEVDDAALMWTRRNLGDSG----VEVLTGDALRVPDDGRRFDIVVTNPPYLRRSDASSI 201

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V       
Sbjct: 202 PGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMAISD 261

Query: 244 -LFLVNAFKDYGGNDRVLLFCR 264
               +    D  G  R +   R
Sbjct: 262 MWEQIEDHDDLAGRPRFVTARR 283


>gi|297622632|ref|YP_003704066.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Truepera radiovictrix DSM 17093]
 gi|297163812|gb|ADI13523.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Truepera radiovictrix DSM 17093]
          Length = 280

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 77/250 (30%), Positives = 112/250 (44%), Gaps = 10/250 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           S  ++++     L   QR  L   + R    E +  ILG   FY + L ++     PRPE
Sbjct: 38  SRSELLLARQRPLSVPQRRRLEAWVRRREAREPLQHILGVAPFYGLTLRVTPQVLVPRPE 97

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV+ ALA     +  R    +LD+GTG+GAV LAL  E P    +  D+S  AL +A
Sbjct: 98  TERLVELALA----HLRGRARPHVLDVGTGSGAVALALQAERPDAVVLASDLSGAALAVA 153

Query: 138 KSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           + NA   G+  RF   D L      +     +++VSNPPY+     + +  EV+  DP  
Sbjct: 154 RENARRLGLPVRFRRADLLADPAVRAFARRAELVVSNPPYLPEGDREAVSPEVQA-DPAT 212

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L  G DGL+ +R +       L       VE+  + +     + ESR         D  
Sbjct: 213 ALYAGPDGLAVFRRLEREAFSALQPGAALFVEL--DARNVARALAESRGWARGAVHDDLV 270

Query: 255 GNDRVLLFCR 264
           G  R L   R
Sbjct: 271 GRPRFLQLVR 280


>gi|188527854|ref|YP_001910541.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470]
 gi|188144094|gb|ACD48511.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Shi470]
          Length = 276

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 101/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEVCFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKKTRLWDRMP-TIQMLVSNPPYIARGYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+G++Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAALKIP--FLACEMGHDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|219126337|ref|XP_002183416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405172|gb|EEC45116.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 424

 Score =  208 bits (529), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 113/260 (43%), Gaps = 16/260 (6%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           SS+ ++ +   VL   Q       +VR    E I  + G  DF +  LT+      PRPE
Sbjct: 162 SSNNLLAN--QVLTAVQFKTYQALLVRRKTMEPIQYLTGQWDFLDYVLTVRHPLLCPRPE 219

Query: 78  TELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           TE LV+           K +     +RILD+G GTG + ++L  + P      +D+   A
Sbjct: 220 TEELVELVREDLATLAAKNNSDRCRLRILDVGCGTGCIGVSLAAKLPNSFVEAIDVEHVA 279

Query: 134 LEIAKSNAVT-----NGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +  A  NA                 +++ F   +V+  FD +VSNPPYI    +  L   
Sbjct: 280 VATATENAERVLGAQYQARFNAQLCEAEVFDVATVQDRFDAVVSNPPYIPRADMGTLETT 339

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE---SRK 243
           V DF+   +L GG DGL   R+I   +     ++ +C +E+       + +  E   S  
Sbjct: 340 VVDFESETALCGGEDGLDVVRSIVKKLPFWCVENAVCWMEVDPTHPALLRKWLESDCSLG 399

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
           +  V+ ++D  GNDR +   
Sbjct: 400 VVFVHTYRDLYGNDRFVKLR 419


>gi|313200714|ref|YP_004039372.1| HemK family modification methylase [Methylovorus sp. MP688]
 gi|312440030|gb|ADQ84136.1| modification methylase, HemK family [Methylovorus sp. MP688]
          Length = 304

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    DS L + +R  L + + R + +      ++     
Sbjct: 38  NAYDEAVWLIMSALHLPHDTLNNFLDSRLLESERKHLAHLLERRVEQRVPTAYLVREAWL 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              +  +      PR     L++  L+  +   E  +     D+ TG+G + + L    P
Sbjct: 98  KGFKFYVDERVIVPRSFIAELLEDGLSPWIDYPEMVESA--ADICTGSGCLGVLLAHTFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             +   VDIS  AL +A  N    G+ ++   +QSD FS+++G  +D+I+SNPPY+++  
Sbjct: 156 NAEVDVVDISTDALAVANINIANYGLQDQITAIQSDMFSALQGKTYDLIISNPPYVDAPS 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R+ +P+I+L  G DGL H  T+      HLN  GL  VEIG+N +  +   +
Sbjct: 216 MAQLPEEYRN-EPQIALGSGTDGLEHTHTLLREAWHHLNDGGLLIVEIGHN-RDALHEAY 273

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +       GN+ V L  +
Sbjct: 274 PDLPFTWLEVE---SGNEFVFLLSK 295


>gi|294141668|ref|YP_003557646.1| hemK family protein [Shewanella violacea DSS12]
 gi|293328137|dbj|BAJ02868.1| hemK family protein [Shewanella violacea DSS12]
          Length = 314

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 117/268 (43%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEEIGQQVIHSN--LTSSEKHKIVELIIRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   +      PR     ++ +  +   P +  + V R+LDL TG+  + +A   E
Sbjct: 98  MFAGLEFFVDERVLVPRSPIAEMIANRFS---PWLYNKQVNRVLDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  AL++A+ N    GV +R   ++SD FS++     +D+IVSNPPY++
Sbjct: 155 FDEAEVDALDISADALDVAQINIENLGVMDRVFPIESDIFSAIPKGPHYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P I L  G DGL   + I    + ++  DGL  VE+G N  V ++
Sbjct: 215 AEDIGDMPDEY-QHEPEIGLASGRDGLDLTKRILANAADYMTTDGLLVVEVG-NSMVHLM 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F       V       G D V +  R
Sbjct: 273 EQFPDVPFTWVAFE---NGGDGVFVLTR 297


>gi|320540077|ref|ZP_08039732.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson]
 gi|320029743|gb|EFW11767.1| N5-glutamine methyltransferase [Serratia symbiotica str. Tucson]
          Length = 310

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L++     
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEFYVDERVLVPRSPIGELINDRFNA 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP + +    RILD+ TG+G + +A     P  +   VDIS + L + + N   +GV  
Sbjct: 128 LLPHLPQ----RILDMCTGSGCIAIACGNAFPEAEVDAVDISNEVLVVTERNIQAHGVEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  V    +D+IV+NPPY+++  +  L  E R F+P++ L  G DGL   R
Sbjct: 184 QVIPIRSDLFRDVPAIQYDLIVTNPPYVDAQDMSDLPQEFR-FEPKLGLAAGDDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L+ DG+   E+G N  V ++  +       +       G D V +  +
Sbjct: 243 RILACAPDYLSDDGVLICEVG-NSMVHLMEQYPDIPFTWLAFK---NGGDGVFMLTK 295


>gi|284009280|emb|CBA76407.1| methylase [Arsenophonus nasoniae]
          Length = 310

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 11/236 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +  H  +  +     F      +      PR     L++   A 
Sbjct: 68  LTLSERHRIVERVLRRINEHIPVAYLTNKAWFCGHEFYVDERVLIPRSPIGELINKHFAG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +      +   ILD+ TG+G + +A   E P  +   VDIS  AL + + N   +G ++
Sbjct: 128 IID----YEPATILDMCTGSGCIAIACAHEFPQAQIDAVDISVDALAVTEQNITAHGFAD 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F ++    ++V+V+NPPY+++  +  L  E    +P+++L  G DGL   R
Sbjct: 184 RIVPICSDLFLNMPPIKYNVMVTNPPYVDAEDMSDLPAEYLV-EPKLALAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            I    SR L ++G+   E+G N  + ++  +       +   +   G D V +  
Sbjct: 243 RILANASRFLTENGVLICEVG-NSMLHLIEQYPDIPFTWLKFEQ---GGDGVFMLT 294


>gi|297565961|ref|YP_003684933.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946]
 gi|296850410|gb|ADH63425.1| modification methylase, HemK family [Meiothermus silvanus DSM 9946]
          Length = 288

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 16/270 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY--- 61
           +++   L    GL    ++              +   +++  +   +  ILG+  FY   
Sbjct: 22  QEARWLLAHALGLEDADLLRGLYKAAPKGIAEQMEGWLMQRRQGYPLQLILGYSLFYVPG 81

Query: 62  -------NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
                   +RL +      PRPETE LV+ AL   L   E+    R+LD+GTG+GA+ LA
Sbjct: 82  LKEDEGGYLRLEVRPGVLIPRPETERLVELALG--LLSAERSFTGRLLDVGTGSGAIALA 139

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L +  P  +    +I   A+ +A+ NA   G+  +        F++     D+IVSNPPY
Sbjct: 140 LKRRCPKAEVWATEIDPAAVALARENARRAGLEVQVLLAP---FTAHLKALDLIVSNPPY 196

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +          E   ++   +L  G +GL   R +     R L   G  ++E+  +    
Sbjct: 197 LPESYRQEAPPE-LSYENPQALYSGPEGLDMPRELLRHAWRALKPGGALALELAESNVHT 255

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +    +      V   +D  G  R L   +
Sbjct: 256 LAEEAQRAGWEAVQVHRDLAGRPRYLTARK 285


>gi|253998641|ref|YP_003050704.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylovorus sp. SIP3-4]
 gi|253985320|gb|ACT50177.1| modification methylase, HemK family [Methylovorus sp. SIP3-4]
          Length = 304

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    DS L + +R  L + + R + +      ++     
Sbjct: 38  NAYDEAVWLIMSALHLPHDTLNNFLDSRLLESERKHLAHLLERRVEQRVPTAYLVREAWL 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              +  +      PR     L++  L+  +   E  +     D+ TG+G + + L    P
Sbjct: 98  KGFKFYVDERVIVPRSFIAELLEDGLSPWIDYPEMVESA--ADICTGSGCLGVLLAHTFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             +   VDIS  AL +A  N    G+ ++   +QSD FS+++G  +D+I+SNPPY+++  
Sbjct: 156 NAEVDVVDISTDALAVANINIANYGLQDQITAIQSDMFSALQGKTYDLIISNPPYVDAPS 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R+ +P+I+L  G DGL H  T+      HLN  GL  VEIG+N +  +   +
Sbjct: 216 MAQLPEEYRN-EPQIALGSGTDGLEHTHTLLREAWHHLNDGGLLIVEIGHN-RDALHEAY 273

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +       GN+ V L  +
Sbjct: 274 PDLPFTWLEVE---SGNEFVFLLSK 295


>gi|226226591|ref|YP_002760697.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226089782|dbj|BAH38227.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 326

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 18/277 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +   +++   +  V   S  ++         LD      +  A+ R L  E +    G  
Sbjct: 46  IDPSQEARWLVAAVLDCSPAELTHRRVAGESLDAATLGRIDAALHRRLAGEPLAYATGSA 105

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  + L +      PRPETE++V  AL  +      R     +D+GTG+GA+ L+L  E
Sbjct: 106 AFRELVLQVDRRVLIPRPETEVVVGEALRVT----SMRPGGIAIDIGTGSGAIALSLAWE 161

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER-----------FDTLQSDWFSSV-EGLFD 166
             F + V  D+S  AL++AK+NA                    +       + V E    
Sbjct: 162 GRFDRVVATDLSQDALDVAKANAERLEAMVHGSRHSPHGVAPVEFRLGADLAPVTELRAR 221

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           V+VSNPPYI       L   VRD++P ++L     G++ Y+ I  G    L  DG   +E
Sbjct: 222 VLVSNPPYIAYDEAHALPSSVRDWEPPVALFAAEQGMARYQAIVSGARAILEPDGWIVLE 281

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +   +      +        V+   D  G +RVL+  
Sbjct: 282 LDARRAQQTAALARQAGFVDVHVIADLAGRERVLVAR 318


>gi|229818481|ref|ZP_04448762.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM
           20098]
 gi|229784351|gb|EEP20465.1| hypothetical protein BIFANG_03789 [Bifidobacterium angulatum DSM
           20098]
          Length = 318

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 66/276 (23%), Positives = 107/276 (38%), Gaps = 19/276 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQV---IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
              D    L    G     V   ++  D +  D +R      + R    E +  I+G   
Sbjct: 45  PEHDVKLLLAEAAGCELSDVDKAMLMGDPIDYDAER--FGAMLARRANREPLQYIVGHAP 102

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + L +    F PR ETEL+    + +           R++DL  G+GA+ L+++ E 
Sbjct: 103 FRYLDLEVGPGVFIPRQETELVAQEGIDWITRNGLYNP--RVVDLCAGSGAIGLSIVTEV 160

Query: 120 PFFKGVGVDISCKALEIAKSNAVT----------NGVSERFDTLQSDWFSSVEGLFDVIV 169
           P     GV+I+ +A    + N             N   E  D   +   + ++G  D+++
Sbjct: 161 PGSHVWGVEINQQAAAWTRRNIAATMRRWPALASNYELEIGDATNATTLAKLDGSIDMVI 220

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +NPPY+    +     EVRD DP ++L GG  DG      I    SR L    L  +E  
Sbjct: 221 TNPPYVPQNNIPD-QPEVRDHDPELALYGGSADGTLIPERIIRRASRLLRAQALFVMEHD 279

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +Q   +           V+   DY    R L+  +
Sbjct: 280 ISQGDRLTAFARINGFEQVHVRNDYTNRPRYLVAVK 315


>gi|269794321|ref|YP_003313776.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sanguibacter keddieii DSM 10542]
 gi|269096506|gb|ACZ20942.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Sanguibacter keddieii DSM 10542]
          Length = 312

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 121/268 (45%), Gaps = 12/268 (4%)

Query: 6   DSHSFLCRVTGLSSHQV----IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           D+   +    G+S   +    ++    + +  Q   L        +   +  + G   F 
Sbjct: 37  DAEILVALAAGVSRGDLQHAALLGRTVLAEAAQAERLRGLARSRAERLPLQHLTGTAPFR 96

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V L +    F PRPETE++   A+  +L  + +R  V ++DL TG+GA+ +A+ +E P 
Sbjct: 97  HVELDVGPGVFVPRPETEVVAQVAVDEALRVVAERGRVVVVDLCTGSGAIAVAIAQEVPE 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESV 178
            +   V++   A   A+ N     ++ R   ++ D     ++++GL DV+VSNPPY+ + 
Sbjct: 157 AEVHAVELDAAAHAWARRNVDR--IAPRVTLVRGDARTALTALDGLCDVVVSNPPYVPTG 214

Query: 179 IVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            V     EV + DP ++L G G DGL   R +    SR L + GL  +E    Q     +
Sbjct: 215 AVPK-DREVAEHDPAVALYGLGPDGLEVPRGVTRAASRLLVRGGLYVMEHAEVQDAGARQ 273

Query: 238 IFESRK-LFLVNAFKDYGGNDRVLLFCR 264
           + +            D  G  R+++  R
Sbjct: 274 MVDDTGDFEPARTLPDLTGRPRMVVARR 301


>gi|157371612|ref|YP_001479601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia proteamaculans 568]
 gi|157323376|gb|ABV42473.1| modification methylase, HemK family [Serratia proteamaculans 568]
          Length = 324

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F ++   +      PR     L++   + 
Sbjct: 82  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYVDERVLVPRSPIGELINDRFSA 141

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +P         ILD+ TG+G + +A     P  +   VDIS   L + + N    GV +
Sbjct: 142 LIPH----SPSHILDMCTGSGCIAIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQ 197

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 198 QVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFR-FEPELGLAAGSDGLKLVR 256

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L+ DG+   E+G N  V ++  +       +       G D V +  +
Sbjct: 257 RILACAPDYLSDDGVLICEVG-NSMVHLMEQYPDIPFSWLEFE---NGGDGVFMLTK 309


>gi|224283866|ref|ZP_03647188.1| modification methylase, HemK family protein [Bifidobacterium
           bifidum NCIMB 41171]
 gi|311064751|ref|YP_003971476.1| peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum PRL2010]
 gi|310867070|gb|ADP36439.1| HemK Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum PRL2010]
          Length = 329

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 106/304 (34%), Gaps = 45/304 (14%)

Query: 3   ALRDSHSFLCRVTG-----LSSHQVIVDPDSVLDDR------------------------ 33
              D+   L    G     +    ++ +P   L                           
Sbjct: 28  PEHDAKLLLAEACGRDLRDIDKAMLMGEPLDGLPHEHASFDAPDAGAASSDSSDTVGDAV 87

Query: 34  --QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
                     I R    E +  I G   F  + L +    F PRPETE +V + + +   
Sbjct: 88  TTALARFHAMIARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGIDWLTR 147

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------A 141
             E+    RI+DL  G+GA+ L+L+ E    +   V+   +  +    N          A
Sbjct: 148 --ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISRLDPLA 205

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-I 200
             N   E  D       +  +G  D++V+NPPYI    +     EVRD DP+ +L GG  
Sbjct: 206 ADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPE-QPEVRDHDPKAALYGGSA 264

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DG      I    +  L   G+  +E   +Q   +V   ++      +   D+ G  R L
Sbjct: 265 DGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTGRPRYL 324

Query: 261 LFCR 264
              R
Sbjct: 325 FAVR 328


>gi|293395104|ref|ZP_06639390.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM
           4582]
 gi|291422281|gb|EFE95524.1| protein-(glutamine-N5) methyltransferase [Serratia odorifera DSM
           4582]
          Length = 370

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   +R  +   ++R +     +  +     F  +   +   
Sbjct: 110 LPSLYLPLDIPEDMRSARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEFYVDER 169

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L++   +  +P         ILD+ TG+G + +A     P  +   VDIS
Sbjct: 170 VLVPRSPIGELINDRFSALIPH----PPRHILDMCTGSGCIAIACGYAFPEAEVDAVDIS 225

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
            + L + + N   +GV  +   ++SD F  V    +D+IV+NPPY+++  +  L  E R 
Sbjct: 226 SEVLAVTERNIQAHGVEHQVIPIRSDLFREVPPIQYDLIVTNPPYVDAEDMSDLPQEFR- 284

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P + L  G DGL   R I       L+ DG+   E+G N  V ++  +       +  
Sbjct: 285 FEPELGLAAGSDGLKLVRRILACAPDFLSDDGVLICEVG-NSMVHLMEQYPDIPFTWLEF 343

Query: 250 FKDYGGNDRVLLFCR 264
                G D V +  +
Sbjct: 344 E---NGGDGVFMLTK 355


>gi|325953818|ref|YP_004237478.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Weeksella virosa DSM 16922]
 gi|323436436|gb|ADX66900.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Weeksella virosa DSM 16922]
          Length = 283

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 8/238 (3%)

Query: 27  DSVLDDRQRFFLTNA---IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           D +L     F L      +V     + I +ILG+  F + +  ++  T  PRPETE LV+
Sbjct: 41  DFLLPAEHIFRLDEIENDVVALSLGKPIQQILGYAYFMDWKFLVNEFTLIPRPETEELVE 100

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                +    ++ + +R+LD+GTG+G + +AL    P  +   +D S +A+ +AK NA  
Sbjct: 101 WI---AKDLHKRTNELRVLDIGTGSGCIPIALKHLLPNAQISAIDFSAQAIAMAKKNAKY 157

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDG 202
           N V   F           E  +DV+VSNPPY+ +   + +   V +F+P  +L     + 
Sbjct: 158 NKVEVDFFVHDIFDKFPTEKKYDVLVSNPPYVRNCEKEAMHQNVLNFEPETALFVADDNP 217

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           L +Y+ I +     L  +G+  +EI      ++  ++       V   KD  G+ R+L
Sbjct: 218 LKYYQRIIEVAKEILTAEGVLYLEINQYLSQEMTELYSG-DYEYVELRKDLSGHYRML 274


>gi|319776557|ref|YP_004139045.1| adenine-specific methylase [Haemophilus influenzae F3047]
 gi|317451148|emb|CBY87381.1| conserved hypothetical adenine-specific methylase [Haemophilus
           influenzae F3047]
          Length = 314

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFL-TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   A+ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLALTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    ++  ILDL TG+G + +A     P  +   +D+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----ELHHILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F+++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFTNILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  V ++  +       V 
Sbjct: 248 NITKQILKQAPDYLTENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|119470803|ref|ZP_01613414.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7]
 gi|119446030|gb|EAW27309.1| N5-glutamine methyltransferase [Alteromonadales bacterium TW-7]
          Length = 311

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 8/237 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  L + I   +     +  +     F  +   +      PR     L+ +    
Sbjct: 73  LTSTEKNRLASLIAERINDCTPVPYLTNIAWFAGMPFYVDERVLIPRSPFAELISNRFTP 132

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  +E   V RILDL TG+G + +AL +     +   VDIS +ALE+   N     +S+
Sbjct: 133 WL--VEPNSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLSD 190

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FS VEG  +D+IV+NPPY+++  +  L  E    +P + L  G DGL   R
Sbjct: 191 RVLPIQSDVFSGVEGQKYDLIVANPPYVDAEDMADLPREF-HHEPELGLASGHDGLDVTR 249

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           TI    S HL  +GL  VE+G N  V +  ++ +     +   +  GG    ++  +
Sbjct: 250 TILSEASNHLTDNGLLFVEVG-NSMVHMDALYPNAPFEWIEFEQ--GGLGVFVISKK 303


>gi|83748821|ref|ZP_00945834.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum
           UW551]
 gi|83724513|gb|EAP71678.1| Ribosomal protein L3P methyltransferase [Ralstonia solanacearum
           UW551]
          Length = 300

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 10/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  +       +      
Sbjct: 39  NAYDEAAYLILHTLHLPLDTLEPFLDARLLPEEVAAVLQVIERRTVDRVPAAYLTHEAFM 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + VR  +      PR     L+++ L   +P   +     +L+L TG+G + +    + P
Sbjct: 99  HGVRFYVDERVIVPRSFIGELLENGLDPWIPH--EDGPTDVLELCTGSGCLAILAALQWP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 VD+S  AL +A+ N     +++R    + D ++ +     +DVI++NPPY+   
Sbjct: 157 NATLDAVDLSQDALVVAQRNVDDFDLNDRIRLHEGDLYAPLPPGVHYDVILTNPPYVNET 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR++L GG DG+   R I     RHL   G+  VEIG N++ +V   
Sbjct: 217 SMQALPPEYRA-EPRMALAGGTDGMDIVRRILADAPRHLKPHGVLVVEIG-NERENVEAA 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           F    L  +       G D+V L  R
Sbjct: 275 FPDLDLVWLPT---SAGEDQVFLVTR 297


>gi|37680619|ref|NP_935228.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio vulnificus YJ016]
 gi|320155710|ref|YP_004188089.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|326423914|ref|NP_760853.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio vulnificus CMCP6]
 gi|37199367|dbj|BAC95199.1| putative adenine-specific methylase [Vibrio vulnificus YJ016]
 gi|319931022|gb|ADV85886.1| ribosomal protein L3 methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|319999291|gb|AAO10380.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Vibrio vulnificus CMCP6]
          Length = 310

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L   +R  +   +V+ +        +     F  +   +      PR     L+ + 
Sbjct: 65  NSRLTSSERLRIVERVVKRINERTPTAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAQ 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L      + VRI+DL TG+G + +A     P  +   +DIS  AL +A+ N   +G
Sbjct: 125 FEPWLI----EEPVRIMDLCTGSGCIAIACAHAFPEAEVDAIDISVDALAVAEQNIQDHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + ++   ++SD F  +    +++IV+NPPY++   ++ L  E    +P + L  G DGL 
Sbjct: 181 MEQQVFPIRSDLFRDLPKEQYNIIVTNPPYVDEEDMNSLPTEF-THEPALGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I      +L + G+   E+G N  V ++  +       +      GG+  V L  R
Sbjct: 240 LVRRILANAPDYLTEKGILVCEVG-NSMVHMMEQYPHIPFTWLEFEN--GGHG-VFLLTR 295


>gi|296533065|ref|ZP_06895709.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis
           ATCC 49957]
 gi|296266609|gb|EFH12590.1| protein-(glutamine-N5) methyltransferase [Roseomonas cervicalis
           ATCC 49957]
          Length = 287

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/264 (33%), Positives = 135/264 (51%), Gaps = 6/264 (2%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A R ++   L      S   ++ +P + +           + R L HE +  +LG + 
Sbjct: 27  IEAPRLEARLLLAEAMATSQEALLREPRAAVAPDAASRFAALLQRRLAHEPMAYLLGRQG 86

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ + L +S DT  PR ++E +V++AL      +      R+LDLGTGTG + LA+L E 
Sbjct: 87  FWTLELEVSRDTLIPRADSEAIVEAALE-----VFSGPGGRVLDLGTGTGCLLLAVLAER 141

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
               GVGVD+S  A  +A  NA  +G++ R   L  DW +++ G FD+++SNPPYIES +
Sbjct: 142 AGAFGVGVDLSPGAAALAARNAARSGLAGRAAFLAGDWDAALAGRFDLVLSNPPYIESAV 201

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  EV   +P  +LDGG DGL  YR I   + R L   G   +E+G  Q   V  + 
Sbjct: 202 VPGLMPEVAGHEPARALDGGADGLDAYRVIVAALPRLLAPGGHAVLELGQGQAPAVSALA 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
            +  L       D GG +R L+  
Sbjct: 262 AAAGLASRGLRADLGGVERALVLA 285


>gi|466533|dbj|BAA05915.1| possibly protoporphyrinogen oxidase [Escherichia coli]
          Length = 225

 Score =  207 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 8/192 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q   L   + R    E I  + G R+F++
Sbjct: 20  PRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PEQPCRILDLGTGTGAIALALASERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           + + VD    A+ +A+ NA    +      LQSDWFS++ G  F +IVSNPPYI+     
Sbjct: 135 EIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPH 193

Query: 182 CLGLEVRDFDPR 193
               +VR F+PR
Sbjct: 194 LQQGDVR-FEPR 204


>gi|254240024|ref|ZP_04933346.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192]
 gi|126193402|gb|EAZ57465.1| hypothetical protein PA2G_00659 [Pseudomonas aeruginosa 2192]
          Length = 304

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +R  L   + R ++       +LG   F
Sbjct: 33  NAWDEARHLVLGSLHLPWEISDSYLDCRLEDDERAELAEILRRRIEERIPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +  ++      PR     L++   A  LP     +  RILDL TG+G + +A      
Sbjct: 93  CGIPFSVDEGVPVPRSPIAELIEQRFAPWLPA----EPARILDLCTGSGCIGIACAYAFE 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S  ALE+A  N   + + ER  T+Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 149 QAEVVLADLSFDALEVANVNIERHDLGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL++ GL  VE+G N +V V  ++
Sbjct: 209 FADMPAEF-HHEPELGLACGDDGLDLVRRMLAEAADHLSEKGLLIVEVG-NSEVHVQALY 266

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 267 PEVDFTWLEF 276


>gi|194289807|ref|YP_002005714.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase
           [Cupriavidus taiwanensis LMG 19424]
 gi|193223642|emb|CAQ69649.1| putative Adenine-specific methyase [Cupriavidus taiwanensis LMG
           19424]
          Length = 297

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 105/265 (39%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R +        I      
Sbjct: 34  NAYDEAAYLVLHTLNLPLDTLDPFLDARLLPEEVEAVLKVIDRRVNERVPAAYITHEAYM 93

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +R  + S    PR     L+   L   +   E   +  +L+L TG+G + +      P
Sbjct: 94  HGLRFYVDSRVIVPRSFIGELLQEGLEPWVG--ESGSIGPVLELCTGSGCLPILAAHVWP 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
             K   VDIS  AL +A+ N     + +R    + D ++ +     +DVI++NPPY+   
Sbjct: 152 HAKIDAVDISPDALAVARRNVADYKMDDRIRLYEGDLYAPLPHGATYDVILTNPPYVNEA 211

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E +  +PRI+L GG DG+   R I  G    LN  G+  VEIG     +V   
Sbjct: 212 SMQALPAEYQA-EPRIALAGGDDGMDVVRRIIAGAKARLNPGGVLVVEIGNEHA-NVEAA 269

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F       +       G+++V L  
Sbjct: 270 FPEL---EIVWLPVSAGDEQVFLLT 291


>gi|169796031|ref|YP_001713824.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AYE]
 gi|184158049|ref|YP_001846388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii ACICU]
 gi|213157235|ref|YP_002319280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB0057]
 gi|215483488|ref|YP_002325705.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB307-0294]
 gi|239501832|ref|ZP_04661142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB900]
 gi|260555080|ref|ZP_05827301.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii ATCC 19606]
 gi|301346168|ref|ZP_07226909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB056]
 gi|301513156|ref|ZP_07238393.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB058]
 gi|301596746|ref|ZP_07241754.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii AB059]
 gi|332851680|ref|ZP_08433605.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013150]
 gi|332865945|ref|ZP_08436725.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013113]
 gi|332874509|ref|ZP_08442412.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6014059]
 gi|169148958|emb|CAM86833.1| putative adenine-specific methylase [Acinetobacter baumannii AYE]
 gi|183209643|gb|ACC57041.1| Methylase of polypeptide chain release factors [Acinetobacter
           baumannii ACICU]
 gi|213056395|gb|ACJ41297.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB0057]
 gi|213987164|gb|ACJ57463.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii AB307-0294]
 gi|260411622|gb|EEX04919.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter baumannii ATCC 19606]
 gi|322508368|gb|ADX03822.1| Putative adenine-specific methylase [Acinetobacter baumannii
           1656-2]
 gi|323517990|gb|ADX92371.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii TCDC-AB0715]
 gi|332729687|gb|EGJ61022.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013150]
 gi|332734995|gb|EGJ66081.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6013113]
 gi|332737353|gb|EGJ68277.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Acinetobacter baumannii 6014059]
          Length = 334

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADSEIL----------------DAKLLPSEKAEFLSLLERRINERIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F  +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFEKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFNWLTFQK 310


>gi|237746595|ref|ZP_04577075.1| modification methylase HemK [Oxalobacter formigenes HOxBLS]
 gi|229377946|gb|EEO28037.1| modification methylase HemK [Oxalobacter formigenes HOxBLS]
          Length = 302

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 108/265 (40%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L   ++    D+ L   +   +   I R +        +      
Sbjct: 36  NAFDEAAYLILHTLSLPLDRLEPFLDATLLPEETEAVMTIIDRRVTERIPAAYLTNEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L +  +    P +   D +  IL+L TG+G + + L    
Sbjct: 96  QGYSFYVERGVIIPRS---FLAELIVEQFAPWVSDPDGITDILELCTGSGCLAIMLADRF 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
                  V++S  AL IA++N    G+ +R     +D +  + E  + +IV+NPPY+   
Sbjct: 153 ANATVDAVELSPAALGIAQTNINRYGMKDRIQLHHADLYDGIPEKRYQLIVTNPPYVNQS 212

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +D L  E    +P+++L GG DG+   R I       L  DGL  VEIG N+  + +  
Sbjct: 213 SMDTLPPEYL-HEPQMALAGGFDGMDIVRRIVYTAGERLTDDGLLIVEIG-NEAENAMAA 270

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F   +L  ++     GG+DRV L  
Sbjct: 271 FPELELTWLST---SGGDDRVFLLT 292


>gi|6946701|dbj|BAA90668.1| protoporphyrinogen oxidase [Porphyromonas gingivalis]
          Length = 293

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 104/262 (39%), Gaps = 16/262 (6%)

Query: 8   HSFLCRVTGLSSHQVIV-DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
              L   T LS   +++ D D++L       L+  + R      +   +G   F      
Sbjct: 29  RELLTEATSLSRSALLLADKDTLLSTEASQALSRYLDRMKTGMPLQYAVGHAPFLGHEFA 88

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PRPETE LV+  L    P       + +LD+GTG+G + + L +E    K   
Sbjct: 89  VNPSVLIPRPETEELVELILRKERPAAV---PLCLLDVGTGSGCLAITLAREL-RAKVWA 144

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVD 181
           +DIS  AL  A++N    G  +R    + D  S      V    D+IVSNPPYI      
Sbjct: 145 MDISSDALATARANV---GEDDRIFFFEGDILSPDNRWDVLPPVDIIVSNPPYIMPAESA 201

Query: 182 CLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR-HLNKDGLCSVEIGYNQKVDVVRIF 239
            +   V   +P ++L     D L  Y+ IA+      L   G   VE+          +F
Sbjct: 202 DMAYHVLGHEPALALFAPEDDPLLFYKAIANLSGSGKLRSGGRLYVELNPLLAEATCEVF 261

Query: 240 ESR-KLFLVNAFKDYGGNDRVL 260
            ++     V    D  G  R L
Sbjct: 262 SAKEGWCEVRLHADLSGKSRFL 283


>gi|308063857|gb|ADO05744.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori Sat464]
          Length = 276

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+ ++       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHKEEVCFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  +  I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNKHVLIPRPETEILVKKALDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + ER    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISLKALEVASKNIERFNLKERVFLKKTRLWDRMP-TIQMLVSNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+G++Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIVFLAAALKIP--FLACEMGHDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|193077327|gb|ABO12120.2| putative adenine-specific methylase [Acinetobacter baumannii ATCC
           17978]
          Length = 334

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADSEIL----------------DAKLLPSEKAEFLSLLERRINERIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F  +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFEKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFNWLTFQK 310


>gi|238022355|ref|ZP_04602781.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147]
 gi|237866969|gb|EEP68011.1| hypothetical protein GCWU000324_02262 [Kingella oralis ATCC 51147]
          Length = 319

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+VL   +R  +   + R ++    +  +      
Sbjct: 56  NAHDEAAYLILHTLHLPLDTLEPYLDAVLLPSEREAVLALVQRRVEERVPVAYLTNQAWQ 115

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   LA  +   E   V R LDL TG+G + + +    P
Sbjct: 116 GEYDFYVDERVIVPRSFVYELLGEPLAPWIEYPEL--VHRALDLCTGSGCLAIQIADHYP 173

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDIS  ALE+A  N    G+ ER + + +D F  +EG +D+IVSNPPY+++  V
Sbjct: 174 AAQVDAVDISLDALEVAAVNVEDYGLQERVNLIHTDLFEGLEGTYDLIVSNPPYVDAESV 233

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   + 
Sbjct: 234 AALPNEYL-HEPELALGSGEDGLDATREILLQAAKFLNPKGVLLVEIGHN-RDALEAAYP 291

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 292 ELPFMWLET---SGGDGFVFLLTR 312


>gi|145631251|ref|ZP_01787024.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
 gi|144983178|gb|EDJ90673.1| N5-glutamine methyltransferase [Haemophilus influenzae R3021]
          Length = 314

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 13/239 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LSS  + +D  + L         +   +   + R  +   +  +     F      +   
Sbjct: 59  LSSLHLPIDLPTELFNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDER 118

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T  PR     L+       + +    +   ILDL TG+G + +A     P  +   +D+S
Sbjct: 119 TIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAIDLS 174

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N   + +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   
Sbjct: 175 VDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-H 233

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           F+P ++L  G DGL+  + I    S +L ++G+   E+G N  + ++  +       V 
Sbjct: 234 FEPELALGSGHDGLNITKQILKQASDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|260772337|ref|ZP_05881253.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
           CIP 69.14]
 gi|260611476|gb|EEX36679.1| hypothetical adenine-specific methylase yfcB [Vibrio metschnikovii
           CIP 69.14]
          Length = 234

 Score =  207 bits (527), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 10/228 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +   I R  +   I  +     F  +   +      PR     L+ +  +  L      +
Sbjct: 1   MERVIKRINERTPIAYLTNKAWFCGLEFFVDERVLVPRSPIGELIQAQFSPWLL----DE 56

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RI+DL TG+G + +A     P  +   +DIS  AL++A+ N   +G+ ++   ++SD 
Sbjct: 57  PTRIMDLCTGSGCIAIACAYAFPEAEVDAIDISADALQVAEQNIQDHGLEQQVFPIRSDL 116

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F  +    +D+IV+NPPY++   ++ L  E +  +P + L  G DGL   R I      +
Sbjct: 117 FRDLPKEQYDIIVTNPPYVDQEDMNSLPDEFK-HEPELGLAAGTDGLKLARRILANAPHY 175

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L  +G+   E+G N  + +V  + +     +      GG+  V L  +
Sbjct: 176 LTDNGILVCEVG-NSMIHLVDQYPNIPFTWLEFEN--GGHG-VFLLTK 219


>gi|33152710|ref|NP_874063.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus ducreyi 35000HP]
 gi|33148934|gb|AAP96452.1| putative adenine-specific methylase [Haemophilus ducreyi 35000HP]
          Length = 314

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 8/221 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           +   ++  + + I + L   + +  +     F      +      PR     L+      
Sbjct: 76  ITRIEKERIIDMISQRLGMRKPVAYLTNSAWFCGTEYYVDERVIVPRSPIGELIQQGFTG 135

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L      +  RILDL TG+G + +A  +  P  +   VD+S  AL++A+ N   + V+ 
Sbjct: 136 IL----HAEPKRILDLCTGSGCIAIACAQRFPNAEIDAVDLSIDALDVAQINIERHQVAH 191

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   + S+ FS +    +D+IV+NPPY++   ++ +  E    +P+++L  G+DGL   +
Sbjct: 192 QVFPISSNLFSDIPQDKYDLIVTNPPYVDEEDLNEMPYEF-QHEPKLALGSGVDGLDITK 250

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                   +L  +G+   E+G N  + ++  F +     + 
Sbjct: 251 QTLAKAPDYLTDNGVLVCEVG-NSMLHLIEQFPAVPFNWIT 290


>gi|294637237|ref|ZP_06715539.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella tarda ATCC 23685]
 gi|291089583|gb|EFE22144.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Edwardsiella tarda ATCC 23685]
          Length = 320

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L +  + +D P+ +    L   +R  +   ++R +     +  +     F      +   
Sbjct: 60  LPTLYLPMDIPEEMRNARLTLSERHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 119

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+D+  A  +    +     ILD+ TG+G + +A     P  +   VDIS
Sbjct: 120 VLVPRSPIGELIDNRFAGLISGSPQ----HILDMCTGSGCIAIACAYAFPEAEVDAVDIS 175

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
            + LE+ + N   +G+ ++   ++SD F  +    +D+IV+NPPY++   +  L  E R 
Sbjct: 176 GEVLEVTEHNIQQHGLEQQVTPIRSDLFRELPALRYDLIVTNPPYVDEEDMSDLPDEFR- 234

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +  
Sbjct: 235 HEPELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVG-NSMVHLMAQYPDIPFVWLEF 293

Query: 250 FKDYGGNDRVLLFCR 264
             D  G D V +  R
Sbjct: 294 --D-NGGDGVFMLTR 305


>gi|152985719|ref|YP_001348948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas aeruginosa PA7]
 gi|150960877|gb|ABR82902.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudomonas aeruginosa PA7]
          Length = 304

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L         D  L+D +R  L   + R ++       +LG   F
Sbjct: 33  NAWDEARHLVLGSLHLPWEISDSYLDCRLEDDERLELAEVLRRRIEERIPAAYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +  ++      PR     L++   +  LP     +  RILDL TG+G + +A      
Sbjct: 93  CGLPFSVDERVLVPRSPIAELIEQRFSPWLPA----EPARILDLCTGSGCIGIACAYAFE 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V  D+S  ALE+A  N   + + ER  T+Q D F+ + G  FD+IVSNPPY+++  
Sbjct: 149 QAEVVLADLSFDALEVANMNIERHDLGERVYTVQGDGFAGLPGQRFDLIVSNPPYVDAED 208

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E    +P + L  G DGL   R +    + HL + GL  VE+G N +V V  ++
Sbjct: 209 FADMPAEF-HHEPELGLACGDDGLDLVRRMLAEAADHLGEKGLLIVEVG-NSEVHVQSLY 266

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 267 PEVDFTWLEF 276


>gi|327265759|ref|XP_003217675.1| PREDICTED: hemK methyltransferase family member 1-like [Anolis
           carolinensis]
          Length = 430

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 73/287 (25%), Positives = 119/287 (41%), Gaps = 25/287 (8%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSV---LDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     ++  ++      +Q+  +     + L+   +  +LG  
Sbjct: 142 EARASSEYIVSYVLG-AKTFQSLNAGNISPYFSVQQQEQVEQLCAKRLQRMPVQYVLGEW 200

Query: 59  DFYNVRLTLSSDTFEPRPETELLV----DSALAFSLPRIEKRDV--------VRILDLGT 106
           DF ++ L +    F PR ETE LV    D      LP  + ++           IL++G 
Sbjct: 201 DFQDLTLKMKPPVFIPRRETEELVTLVVDEECRKRLPSSDCKEPRLPPETHGPVILEVGC 260

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------ 160
           G+GA+ L+LLK+ P  K + +D    A+ + K NA    + ER   L  +  SS      
Sbjct: 261 GSGAIALSLLKKLPHSKVIAIDKLEAAVNLTKENAERLNLQERVSVLHHEVSSSSWKYLL 320

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             GL D I+SNPPY+    +  L  E+  ++   +LDGG DG++  R I       L   
Sbjct: 321 PWGLVDTIISNPPYVFHEDMTHLATEIHSYEDLGALDGGSDGMNIIREILHLACYLLKDY 380

Query: 221 GLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           G   +E+       V           L +    KD+ G  R L   +
Sbjct: 381 GSVFLEVEPRHPEMVKNWLRGHPDLSLVVCGTHKDFCGKLRFLHIQK 427


>gi|313141021|ref|ZP_07803214.1| methylase of polypeptide chain release factors [Bifidobacterium
           bifidum NCIMB 41171]
 gi|313133531|gb|EFR51148.1| methylase of polypeptide chain release factors [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 321

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 106/304 (34%), Gaps = 45/304 (14%)

Query: 3   ALRDSHSFLCRVTG-----LSSHQVIVDPDSVLDDR------------------------ 33
              D+   L    G     +    ++ +P   L                           
Sbjct: 20  PEHDAKLLLAEACGRDLRDIDKAMLMGEPLDGLPHEHASFDAPDAGAASSDSSDTVGDAV 79

Query: 34  --QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
                     I R    E +  I G   F  + L +    F PRPETE +V + + +   
Sbjct: 80  TTALARFHAMIARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGIDWLTR 139

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------A 141
             E+    RI+DL  G+GA+ L+L+ E    +   V+   +  +    N          A
Sbjct: 140 --ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISRLDPLA 197

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-I 200
             N   E  D       +  +G  D++V+NPPYI    +     EVRD DP+ +L GG  
Sbjct: 198 ADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIPEAQIPE-QPEVRDHDPKAALYGGSA 256

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DG      I    +  L   G+  +E   +Q   +V   ++      +   D+ G  R L
Sbjct: 257 DGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMVSFAQANGFGQAHTGDDWTGRPRYL 316

Query: 261 LFCR 264
              R
Sbjct: 317 FAVR 320


>gi|115763476|ref|XP_001201549.1| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus
           purpuratus]
 gi|115953212|ref|XP_791896.2| PREDICTED: similar to HEMK homolog, partial [Strongylocentrotus
           purpuratus]
          Length = 390

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 25/264 (9%)

Query: 7   SHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +   +  V G+   S    +D   +L   +R  +     + L    +  ILG  DF ++ 
Sbjct: 98  AEYIVAHVLGVRQLSEFARIDQSRILSTEERSRVMELASQKLARVPMQYILGEWDFRDLT 157

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--- 121
           L + +  F PRPETE+LVD  +++     E+ D + IL++G G+GA+ L+LL E      
Sbjct: 158 LKMKAPVFIPRPETEMLVDLLVSY----YEEDDELDILEVGCGSGAIGLSLLHEFQKNVL 213

Query: 122 --------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEGLF 165
                        +D S  A+ + + NA   GVS R     +           S     +
Sbjct: 214 SMFNFHLLAHVTAIDASRDAVMLTQDNASRLGVSNRLSVHHTALTDESPLRIHSKYGTRY 273

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DVIVSNPPY+ +  +D LG E+   +  ++LD G +G+   + I       L   G   +
Sbjct: 274 DVIVSNPPYLFTRDMDDLGPEILRNEDPMALDAGAEGMDVIKAIVKHARFLLKPRGFIWL 333

Query: 226 EIGYNQKVDVVRIFESRKLFLVNA 249
           E        +         F V  
Sbjct: 334 ETDTRHHQMIQEWLVEHPAFSVQF 357


>gi|157374776|ref|YP_001473376.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella sediminis HAW-EB3]
 gi|157317150|gb|ABV36248.1| Site-specific DNA-methyltransferase (adenine-specific) [Shewanella
           sediminis HAW-EB3]
          Length = 314

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSS--HQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEDIGQQVIHSN--LTSSEKHKIVELIIRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  ++  +      PR     ++ +  +   P +  + V R+LDL TG+  + +A   E
Sbjct: 98  MFAGLQFYVDERVLVPRSPIAEMIANRFS---PWLYNKSVNRVLDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  ALE+A+ N  + GV +R   ++SD FS++     +D+IVSNPPY++
Sbjct: 155 FDEAEVDALDISTDALEVAQINVESLGVMDRVFPMESDIFSAIPKGPHYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P + L  G DGL   + I    S +L ++GL  VE+G N  V ++
Sbjct: 215 AEDIGDMPDEF-HHEPEVGLASGRDGLDLTKRILANASDYLTEEGLLVVEVG-NSMVHLI 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F       V+      G D V +  R
Sbjct: 273 EQFPDVPFTWVSFEH---GGDGVFVLTR 297


>gi|291298830|ref|YP_003510108.1| modification methylase HemK family [Stackebrandtia nassauensis DSM
           44728]
 gi|290568050|gb|ADD41015.1| modification methylase, HemK family [Stackebrandtia nassauensis DSM
           44728]
          Length = 291

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 14/264 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+S   +           ++    + + R    E +  +LG   F  
Sbjct: 24  PRVDAEFLAAHVAGVSRGGLFAAAAPTSAQAKK--FRSLVERRAAREPLQHVLGTAPFRY 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +    F PRPETE L + ALA    R+       ++DL  G+GA+  A++ E P  
Sbjct: 82  AELAVGPGVFVPRPETEQLAEWALA----RLATVAAPLVVDLCAGSGAIGHAIVSERPDA 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
             V V+   +A    + N    GV+ R    D +  +  S ++G  D ++SNPPY+ +  
Sbjct: 138 VVVLVEKYPEAANWLRRNLD--GVAARVVEADAVSPETLSDLDGQCDAVLSNPPYVPTST 195

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  EV   DP  ++ GG  GL   R +    +R L   G+ ++E   +    V  + 
Sbjct: 196 --AVSPEVAA-DPATAVFGGSCGLDVIRPLIPRAARLLRPGGVVAIEHDDSHGAVVPELL 252

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
            +          D  G  R     
Sbjct: 253 TAAGFADATDHDDLTGRPRFATAT 276


>gi|315452642|ref|YP_004072912.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter felis ATCC 49179]
 gi|315131694|emb|CBY82322.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter felis ATCC 49179]
          Length = 277

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 11/261 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             +S   L  + G+    + +     LD          +    + + I  I     FY+ 
Sbjct: 24  ALESEILLAHLLGVDRVYLHMHAQEELDGFALERFMRMVKARARGKPIEYITHEVSFYSR 83

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PRPETELLV  A       I++  +  ++++G G+G V ++L  + P   
Sbjct: 84  LFFVDERVLIPRPETELLVHQASEI----IQEYGIKNVIEVGIGSGVVAISLALQHPKIN 139

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            +G DIS  ALE+A  N  T  +  R   + +     VE     ++VSNPPYI       
Sbjct: 140 VMGTDISMDALEVASINITTFSLQSRVSLMHTSLLQGVEVSPRTLVVSNPPYIPLDYP-- 197

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   VR ++P I+L GG +G    + + D  +    +      E+G NQK  +    E R
Sbjct: 198 LDESVR-YEPEIALYGGEEGDEILKALIDEAAS--KRVKFLICEMGDNQKASLSEHLEIR 254

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
               +  + DY   +R  +  
Sbjct: 255 GYRGI-FYNDYAKLNRGFVAT 274


>gi|228905534|ref|ZP_04069483.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis IBL 4222]
 gi|228854070|gb|EEM98779.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis IBL 4222]
          Length = 275

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             I    G+   ++ ++ +  +   P PE ++ +++A  +        +  ++++L TG+
Sbjct: 61  RPIQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYMT------NCHKVMELCTGS 114

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---- 164
           G + + L  E P       DIS KAL++A+ N     +      L+   F   E      
Sbjct: 115 GVIPVMLGMEYPDVDFYASDISDKALKVAQENINFYQLK-NVHLLKGSMFEPFEEQNKTG 173

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+++SNPPY ++ I+  L  +++D  PRISLDGG DGL  YR I     + LNK+G   
Sbjct: 174 FDMLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYII 233

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            E G +Q   +  +F      +V   KDY   +R ++  
Sbjct: 234 FENGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIVGR 272


>gi|75758470|ref|ZP_00738591.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493997|gb|EAO57092.1| Peptide release factor-glutamine N5-methyltransferase [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 273

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 11/219 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             I    G+   ++ ++ +  +   P PE ++ +++A  +        +  ++++L TG+
Sbjct: 59  RPIQYYAGYTYTFDKKIIIDRNVMIPGPEMDIFINTAKKYMT------NCHKVMELCTGS 112

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---- 164
           G + + L  E P       DIS KAL++A+ N     +      L+   F   E      
Sbjct: 113 GVIPVMLGMEYPDVDFYASDISDKALKVAQENINFYQLK-NVHLLKGSMFEPFEEQNKTG 171

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+++SNPPY ++ I+  L  +++D  PRISLDGG DGL  YR I     + LNK+G   
Sbjct: 172 FDMLISNPPYAKTGIIGDLIPQLKDNAPRISLDGGEDGLDFYRIILANAHKFLNKNGYII 231

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            E G +Q   +  +F      +V   KDY   +R ++  
Sbjct: 232 FENGEDQSEKIQELFIQNGFKVVEVVKDYINIERFIVGR 270


>gi|313678883|ref|YP_004056623.1| methyltransferase, HemK family [Mycoplasma bovis PG45]
 gi|312950570|gb|ADR25165.1| methyltransferase, HemK family [Mycoplasma bovis PG45]
          Length = 240

 Score =  206 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 18/241 (7%)

Query: 28  SVLDDRQRFFLTNAI-----VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L +++R+ L   I      +  +   I  I+G+ ++ NVR+ L+ +   PR ETE LV
Sbjct: 6   DLLLEKKRYGLKQEISDLELEKIEQGYPIQYIMGYVEYANVRINLNHNVLIPRYETEELV 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
              L   L     +  +++LDL TG+G + LAL K     +    DI  +A+   K NA+
Sbjct: 66  FILLKEYL-----KPGMKVLDLCTGSGFIGLALKKNLNSIRLTLSDIDSEAILQTKENAI 120

Query: 143 TN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N G  E  + +QSD F  + G FDVIVSNPPY+     D +   V  F+P I+L     
Sbjct: 121 LNFGNDENIEIVQSDCFKDITGKFDVIVSNPPYLTYDDKD-VDESVSKFEPAIALFSPDS 179

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   Y  I +    +LN+ G+ + EI          IF+  K+  V   KD    DR + 
Sbjct: 180 GWYFYEKILNEAKTYLNEGGILAFEINPKH------IFKWEKIPGVRILKDMSKKDRFVF 233

Query: 262 F 262
            
Sbjct: 234 I 234


>gi|54298194|ref|YP_124563.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella pneumophila str. Paris]
 gi|53751979|emb|CAH13405.1| hypothetical protein lpp2252 [Legionella pneumophila str. Paris]
          Length = 310

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 7/224 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  L N + + + +   +  ++    F ++   +      PR     L+++ 
Sbjct: 71  NARLTTSERKHLCNQLDKRINQRVPVPYLIKEAYFCDLPFYVDERVLIPRSPIGELINNQ 130

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            +   P IE   V  +LDL TG+G + +A     P  +   VDIS +AL +A  N   + 
Sbjct: 131 FS---PWIEAERVHHVLDLCTGSGCIAIACCYAFPEAQVDAVDISNQALAVATINCERHD 187

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V ++   ++SD F+++ G  +D+IVSNPPY+    +  L  E R  +P ++L+ G +GL+
Sbjct: 188 VGDQLALIESDCFTALSGKQYDLIVSNPPYVGKEEMQTLPDEYR-HEPVLALETGNNGLA 246

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
               I      +L++ G+  VE+G N +  +   +       + 
Sbjct: 247 IIEKILKNAHAYLSEHGILVVEVG-NSEEALCETYPMVPFTWLE 289


>gi|25027861|ref|NP_737915.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens
           YS-314]
 gi|259506252|ref|ZP_05749154.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium efficiens YS-314]
 gi|23493144|dbj|BAC18115.1| putative protoporphyrinogen oxidase HemK [Corynebacterium efficiens
           YS-314]
 gi|259166156|gb|EEW50710.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium efficiens YS-314]
          Length = 280

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 94/266 (35%), Gaps = 15/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+      + G     V +     + D        A+ R    E +  ILG      
Sbjct: 23  PLNDARLIAAHLLGCGPLNVALYMRDPVPD----GFDEAVARRAAREPLQHILGRAPMGP 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+     R    D   ++DL TG+GA+   +  E    
Sbjct: 79  LDLHVGPGVFVPRPETEVLADWAVR----RGRGVDKPVVVDLCTGSGALAAYIAHELVDA 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
               V++   A   A+ N             D         + G  D++VSNPPY+    
Sbjct: 135 SVTAVELDPGAATWAQRNFDEFTPGVDLVIGDVTDPTLLPDLHGRVDIVVSNPPYVP--E 192

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              L  EV   DP +++  G  G+     +   +   L   G+  +E        V  + 
Sbjct: 193 TGDLDPEVYR-DPHMAVFSGPTGMDVITEMIHLIHALLAPGGVVGIEHDDTTSAAVRDVV 251

Query: 240 ESR-KLFLVNAFKDYGGNDRVLLFCR 264
                   V   KD  G DR +   +
Sbjct: 252 TGHGGFVDVAVLKDLTGRDRFITASK 277


>gi|229844844|ref|ZP_04464982.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 6P18H1]
 gi|229812225|gb|EEP47916.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 6P18H1]
          Length = 314

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 99/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRIPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKLAPNYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|163857113|ref|YP_001631411.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella petrii DSM 12804]
 gi|163260841|emb|CAP43143.1| putative adenine-specific methylase [Bordetella petrii]
          Length = 296

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L  + +    D+ +   +R  + + + R +   +    +      
Sbjct: 36  NAWDEAVYLVLHTLHLPLNTLDPFLDARVLPDERARVLDLLDRRVAERQPAAYLTREAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA   P +E   V  +LD+ TG+G + +       
Sbjct: 96  CGHRFYVDERVIVPRSPIAELLDQGLA---PWVEPESVRAVLDMCTGSGCLAILAALAFS 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VD+S  ALE+A+ N    G+ +R    +SD F  +    +DVIV NPPY+ S  
Sbjct: 153 DARVDAVDVSPDALEVARRNVADYGLQDRLTLHRSDLFDQLPAAAYDVIVCNPPYVNSAS 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R I     R+L   G+  +EIG+  +      F
Sbjct: 213 MAALPDEYR-HEPALALAGGADGMDLVRRILAAAPRYLAPQGVLVLEIGHE-RPHFEAAF 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
              +   ++       +D++LL  R
Sbjct: 271 PQLQPVWLDTE---AASDQILLLAR 292


>gi|91776222|ref|YP_545978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylobacillus flagellatus KT]
 gi|91710209|gb|ABE50137.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Methylobacillus flagellatus KT]
          Length = 299

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 118/265 (44%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +R  L   I R +        ++     
Sbjct: 38  NAYDEAVWLIMSSLHLPHDTLDNFLDARLLPPERTRLKELIRRRITDRTPTAYLVNEAWL 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              +  +      PR     L++ +L+  +   E  +     D+ TG+G + + L    P
Sbjct: 98  KGFKFYVDERVIVPRSFIAELLEDSLSPWIEYPEMVESA--ADICTGSGCLGVLLANAFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 VDIS  AL +A  N    G+ ++   ++SD FS+++G  +D+I+SNPPY+++  
Sbjct: 156 NAHIDVVDISPDALAVASINIRNYGLEDQITAIESDMFSNLQGRTYDIIISNPPYVDASS 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R+ +P I+L  G  GL H   + +   +HLN +GL  VEIG+N +  ++ ++
Sbjct: 216 MALLPQEYRN-EPEIALGSGPTGLDHTHVLLNEAKKHLNDNGLLVVEIGHN-RDALLEVY 273

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +    D  GN+ V L  +
Sbjct: 274 PHLPFTWLEV--D-SGNEFVFLLTK 295


>gi|260554187|ref|ZP_05826445.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
 gi|260404693|gb|EEW98205.1| protein-(glutamine-N5) methyltransferase [Acinetobacter sp.
           RUH2624]
          Length = 334

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 110/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADSEIL----------------DAKLLPSEKAEFLSLLERRINERIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F + +   +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVEFNWLTFQK 310


>gi|89898159|ref|YP_515269.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chlamydophila felis Fe/C-56]
 gi|89331531|dbj|BAE81124.1| tRNA/rRNA methyltransferase [Chlamydophila felis Fe/C-56]
          Length = 283

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 8/258 (3%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R++   L    G+SS   +     VLD          + +         I G   F  + 
Sbjct: 24  REASDILMDFLGISSRAQLAS--VVLDADSLETYWKRVQQRAARVPTSYIHGSVSFLGLH 81

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L + S    PR ETELL +  + +         +    D+  G+G + L++ K  P  + 
Sbjct: 82  LDVDSRVLIPRMETELLAERIIKYLTQH---PHIRTFYDVCCGSGCLGLSVKKYCPEIQV 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V  DI  KA+ +AK+NA  N +  + + L  D FS      D  V NPPY+    +  + 
Sbjct: 139 VLSDICPKAVAVAKANASINNL--KVEILLGDLFSPYSYPADAFVCNPPYLSFSEIMYVD 196

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            EVR  +P  +L GG  G+  Y  IA  +   L   G+  +EIGY Q   + +IF  R +
Sbjct: 197 PEVRCHEPWKALVGGSSGVEFYERIAQDLDLVLCPGGVGWLEIGYRQGELIKKIFAGRGV 256

Query: 245 FLVNAFKDYGGNDRVLLF 262
                ++D  G DR+   
Sbjct: 257 SG-TIYQDLSGCDRIFFL 273


>gi|293608153|ref|ZP_06690456.1| modification methylase [Acinetobacter sp. SH024]
 gi|292828726|gb|EFF87088.1| modification methylase [Acinetobacter sp. SH024]
 gi|325122117|gb|ADY81640.1| putative adenine-specific methylase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 335

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADSEIL----------------DAKLLPSEKAEFLSLLERRINDRIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENAKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTIDFNWLTFQK 310


>gi|300311474|ref|YP_003775566.1| adenine-specific methylase/methyltransferase [Herbaspirillum
           seropedicae SmR1]
 gi|300074259|gb|ADJ63658.1| adenine-specific methylase/methyltransferase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 296

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L   Q+    D+ L   +   +   I R  K       I      
Sbjct: 33  NALDEAAYLILHTLKLPLDQLDPFLDARLLPDEIAAVMRVIERRSKDRVPAAYITHEAWL 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+    +  +   E  +    LDL TG+G + + L    P
Sbjct: 93  GAYRFYVDERVIVPRSFIAELIPQHFSPWIQDPEAIENA--LDLCTGSGCLPILLADAFP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VDIS  AL +A+ N     + ER + ++SD ++ +    +D+I+SNPPY+ S  
Sbjct: 151 NAQIDAVDISADALAVARKNVDEYQLQERINLVESDLYTQLPLRKYDLIISNPPYVNSGS 210

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +P+++L GG DG+   R I  G +  L  +G+  VEIG N++      F
Sbjct: 211 MAKLPQEYLR-EPQLALAGGEDGMDLVRKIVAGAAERLTPEGVLVVEIG-NERAFAEAAF 268

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
              +L  +       G+D V L  
Sbjct: 269 PELELTWLTT---SAGDDMVFLVT 289


>gi|113953082|ref|YP_729766.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311]
 gi|113880433|gb|ABI45391.1| methyltransferase, HemK family protein [Synechococcus sp. CC9311]
          Length = 306

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 115/267 (43%), Gaps = 9/267 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIV-----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           D    L      S   +       D +  L                 H  +  ++G   +
Sbjct: 27  DLDWLLSIAADCSWSDLQKLRICPDVEIELSSSLHHLTDLWAQHRDHHIPLQHLVGICPW 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +SSD   PR ETELL++ AL   LP   +       DLGTG+GA+  AL +  P
Sbjct: 87  RDLELEVSSDALIPRQETELLIELALQC-LPEDARDVEGIWADLGTGSGALAAALARVFP 145

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIES 177
            ++G  VD S  AL +A+ N +       +      W+  +    G  D+++SNPPYI +
Sbjct: 146 SWQGHAVDSSGSALALAERNLIALAGKSDWQLHLGSWWEPLKPWWGQIDLVLSNPPYIPT 205

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            ++D L   V+D +P ++L GG DGL   R I    SR L   G   +E  ++Q   V++
Sbjct: 206 AVMDELAPVVKDHEPHLALCGGEDGLDCCRQIIRDASRALAPGGWILLEHHHDQSAMVLK 265

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +     L    A  D  G  R  L  R
Sbjct: 266 LLSDAGLERPEARYDLQGIPRFALAQR 292


>gi|195953186|ref|YP_002121476.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932798|gb|ACG57498.1| cyclic nucleotide-binding protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 258

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 23/265 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +LRD+   L  V+GL  + + ++ D   L+        + + +      +   +G   F+
Sbjct: 13  SLRDTLLVLEHVSGLDKNYIFLNQDNIELNQDVLEAFKSILSKIQSGMPLQYAIGKWWFF 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETE++V+ A+ F+       +         G+G + + LLK +P 
Sbjct: 73  GEEFIIEPPVLIPRPETEIVVEEAMKFAKQFKIGFEPFV------GSGIISIVLLKHNPH 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
            K V  DI+ KA E+A  NA  + V +R   + SD   +++    D +V+NPPYI + ++
Sbjct: 127 LKMVATDINKKACELALKNAKLHKVEDRLLVVCSDVAKAIKIEKVDFLVANPPYIPTNVL 186

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL--CSVEIGYNQKVDVVRI 238
           + L   V +++   +LDG  +GL  Y+         L   G+    +EIG++Q+  +  +
Sbjct: 187 NTLEKSVLEYEDIKALDGKEEGLFFYKK--------LKSLGIKPMILEIGHDQEQALKDL 238

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           F       V    DY  N RV +  
Sbjct: 239 FG-----DVEIIYDYSNNPRVAIIR 258


>gi|116072663|ref|ZP_01469929.1| Modification methylase HemK [Synechococcus sp. BL107]
 gi|116064550|gb|EAU70310.1| Modification methylase HemK [Synechococcus sp. BL107]
          Length = 302

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 107/219 (48%), Gaps = 7/219 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +  ++G   + ++ L +SS    PR ETELLVD ALAF+      R      DLGTG 
Sbjct: 82  MPLQHLVGVCPWRDLLLEVSSAALIPRQETELLVDLALAFA----GGRPPRSWADLGTGC 137

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLF 165
           GA+ ++L +  P  +G  VD+S  AL +A+ N      ++     Q  W+  +    G  
Sbjct: 138 GAIAVSLCRAWPDAEGHAVDLSIDALALAEKNLKALAPAQSCRLQQGSWWVPLRASWGQL 197

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +++VSNPPYI S ++  L   VR+ +P ++L GG DGL   R++     R L   G+  +
Sbjct: 198 EIVVSNPPYIPSPLLGELAPVVREHEPHVALVGGEDGLEAIRSLLKDAPRALAPGGVLFL 257

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           E  ++Q   V  +     L  V+A  D  G  R     R
Sbjct: 258 EHHHDQSESVQDLMRRVGLVNVSAANDLEGVARFAQGQR 296


>gi|260593449|ref|ZP_05858907.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis
           F0319]
 gi|260534565|gb|EEX17182.1| protein-(glutamine-N5) methyltransferase [Prevotella veroralis
           F0319]
          Length = 287

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 10/269 (3%)

Query: 6   DSHSFLCRVT----GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++ + +  V     GLS   +     + +       L   + R    E +  +LG   F 
Sbjct: 18  EAQAIIRLVLEVKFGLSLTDIYTGKVNEISRDAAEELDKIMQRLASSEPVQYVLGMETFC 77

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
                ++     PRPETE+L     A        ++    +++LD+GTG+G + + L  +
Sbjct: 78  GRSFKVAPGVLIPRPETEVLCHWIEADNNHPYCALQPPVPLQVLDVGTGSGCIAVTLALD 137

Query: 119 SPFFKGVGVDISCKALEIAKSNAVT--NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                    DIS  AL IA+ N     + V  + + + S   ++ E  +D+IVSNPPYI 
Sbjct: 138 LYNSAVTAWDISADALLIARDNVHRWDSSVVLQMEDILSISATAKEQKWDIIVSNPPYIC 197

Query: 177 SVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                 +   V  ++P  +L     D +  YR IA+     L  DG    E        V
Sbjct: 198 DKERSSMAENVLKYEPETALFVPDNDPIKFYRAIAEYGVTALTDDGKLYFETNPLYIYKV 257

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             +  +     +   +D  G  R +   R
Sbjct: 258 KDMLSNLGYKQIELKEDQFGKQRFVKAMR 286


>gi|255318967|ref|ZP_05360192.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SK82]
 gi|262378297|ref|ZP_06071454.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SH164]
 gi|255303984|gb|EET83176.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SK82]
 gi|262299582|gb|EEY87494.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter radioresistens SH164]
          Length = 336

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 20/243 (8%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD-- 83
           D+ L   ++    N + R +        +L    F+N    +      PR     L++  
Sbjct: 70  DAKLLPSEKEEFLNLLARRVNERIPTSYLLNLAYFFNKPFYVDERVLIPRSPIAELIENR 129

Query: 84  -------------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
                         A        + +   RILD+ TG+G + +AL    P  +    DIS
Sbjct: 130 FAPYCLDEHGQLREAHNNLPVNSDPQTPRRILDMCTGSGCIAIALAYAFPEAEVDATDIS 189

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVR 188
            +ALE+A  N   + +  +   ++SD FS +  E  +D+IVSNPPY+++  +  L  E  
Sbjct: 190 KEALEVAAINTEHHNMQYQVALMESDLFSKIPAENQYDLIVSNPPYVDAEDMADLPEEFL 249

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             +P ++L  G DGL   R +    + +L +DGL  +E+G N +  + + F +     + 
Sbjct: 250 -HEPELALAAGQDGLDLVRKMLSQAADYLTEDGLIVIEVG-NSEWAMKQNFNTVDFHWLE 307

Query: 249 AFK 251
             K
Sbjct: 308 FKK 310


>gi|50085164|ref|YP_046674.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. ADP1]
 gi|49531140|emb|CAG68852.1| putative adenine-specific methylase [Acinetobacter sp. ADP1]
          Length = 336

 Score =  206 bits (525), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 107/269 (39%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWAADAEIL----------------DAKLLPSEKAEFLSLLERRINARIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F N    +      PR     L++                AL         +   RILD+
Sbjct: 104 FANKPFYVDERVLIPRSPVAELIEQRFAPYALDENGEMREALNSLPENATPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS  ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKDALEVAALNVEHHNKQYQIALLESDLFTKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L+++GL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLSENGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFHWLTFQK 310


>gi|229846231|ref|ZP_04466343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 7P49H1]
 gi|229811235|gb|EEP46952.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 7P49H1]
          Length = 314

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTSSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   +D+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYAFPNAEVDAIDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 QLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGHDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I      +L+++G+   E+G N  V ++  +       V 
Sbjct: 248 NITKQILKLAPNYLSENGVLVCEVG-NSMVSLIEQYPDVPFEWVE 291


>gi|87160068|ref|YP_494717.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88196021|ref|YP_500834.1| HemK family modification methylase [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|87126042|gb|ABD20556.1| modification methylase, HemK family [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87203579|gb|ABD31389.1| modification methylase, HemK family, putative [Staphylococcus
           aureus subsp. aureus NCTC 8325]
          Length = 250

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 12/253 (4%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
           V   +    +V     +          A+ R L  E I  I+G+  FY     ++S+   
Sbjct: 4   VFQWTRTDFVVHMHDDMPKAMIMKFDLALQRMLLGEPIQYIVGFASFYGRTFDVNSNCLI 63

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPET    +  +   L ++E  D   I+D+GTG+G + + L  E P    +  DIS +A
Sbjct: 64  PRPET----EEVMLHFLQQLE--DDATIVDIGTGSGVLAITLKCEKPDLNVIATDISLEA 117

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV--EG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           + +A++NA  +    +   L  D    +  EG   + ++SNPPYI+   +  +   V  F
Sbjct: 118 MNMARNNAEKH--QSQIQFLTGDALKPLINEGIKLNGLISNPPYIDEKDMVTMSPTVTRF 175

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLFLVNA 249
           +P  +L     G + Y +I + +   + K      EIGYNQ   +   I        ++ 
Sbjct: 176 EPHQALFADNHGYAIYESIIEDLPHVMEKGSPVVFEIGYNQGEALKSIILNKFPDKKIDI 235

Query: 250 FKDYGGNDRVLLF 262
            KD  G+DR++ F
Sbjct: 236 IKDINGHDRIVSF 248


>gi|315633950|ref|ZP_07889239.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis
           ATCC 33393]
 gi|315477200|gb|EFU67943.1| protein-(glutamine-N5) methyltransferase [Aggregatibacter segnis
           ATCC 33393]
          Length = 316

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 18/254 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRIL 55
            A  ++   +     L++  +  D  S L         +   +   I+R  K   +  ++
Sbjct: 50  NAWDEAQQLV-----LTTLHLPADFPSELYDTRLTTAEKLEIIRLVIIRIEKRIPVAYLI 104

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
               F  +   +      PR     L++   A  L     R+  RILD+ TG+G + +A 
Sbjct: 105 HRAWFCGLEFYVDERVIVPRSPISALIEQGFAGLL----TREPQRILDMCTGSGCIAIAC 160

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPY 174
            +  P      VD+S  AL +A+ N   + ++ R   +QSD FS  +E  +D+IV+NPPY
Sbjct: 161 AERFPEADVDAVDLSFDALNVAEINIERHNLTHRVFPIQSDLFSRLLEEQYDLIVTNPPY 220

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           ++   +  +  E   ++P ++L  G DGL+  + I      +L  DG+   E+G N  V 
Sbjct: 221 VDLEDLSDMPEEF-HYEPEMALGSGNDGLTITKEILRLAPNYLADDGVLVCEVG-NSMVH 278

Query: 235 VVRIFESRKLFLVN 248
           ++  F       + 
Sbjct: 279 LIEQFPQVPFNWLE 292


>gi|218886540|ref|YP_002435861.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757494|gb|ACL08393.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 369

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/312 (25%), Positives = 119/312 (38%), Gaps = 60/312 (19%)

Query: 7   SHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +   + RV  L    +++     P + +           + R    E    ILG R+FY 
Sbjct: 60  AELLVARVLSLPRQDLLLRLALHPAAPVTQDALAHAAALLARRAAGEPTAHILGEREFYG 119

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++  T  PRPETELLV++AL+ +             D GTGTG +   L  E    
Sbjct: 120 RDFLVTPATLIPRPETELLVETALSLA------PRTAFFADCGTGTGCIAATLCAERDDL 173

Query: 123 KGVGVDISCKALEIAKSN--------------------------------AVTNGVSERF 150
           +G+  DIS  AL +A  N                                A      +R 
Sbjct: 174 RGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQNAQSAARRAAFQRC 233

Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----------- 197
             + +D+   +  +G  D++VSNPPY+       L  EVRD +PR +L            
Sbjct: 234 QPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRSALVPCAGEGLDDAA 293

Query: 198 ---GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE--SRKLFLVNAFKD 252
              G  DGL H R +     R L   GL  +E G  Q   V  +F+  SR    V+  +D
Sbjct: 294 AAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQPCSRLWAQVDIRRD 353

Query: 253 YGGNDRVLLFCR 264
               DR ++  R
Sbjct: 354 LARLDRYVVARR 365


>gi|314955550|gb|EFS99953.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL027PA1]
          Length = 291

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCEALRIQPSQLIRVASVNADDEDR--FNQMVDRRRSGEPAQDIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGAFPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D          FDV+V+NPPY+     
Sbjct: 143 RVSAVEVDDAALTWTRRNLCDSG----VEVLAGDALRVPDDSRRFDVVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPSGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
           +      +    D  G  R +   R
Sbjct: 259 TSDMWEQIEDHDDLAGRPRFVTARR 283


>gi|315126139|ref|YP_004068142.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas sp. SM9913]
 gi|315014653|gb|ADT67991.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas sp. SM9913]
          Length = 311

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 8/234 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  L   I   +     +  +     F N+   +      PR     L+++    
Sbjct: 73  LTSTEKNRLAGLIAERINDFTPVPYLTNIAWFANMPFYVDERVLIPRSPFAELINNRFTP 132

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L + E   V RILDL TG+G + +AL +     +   VDIS +ALE+A  N     +S+
Sbjct: 133 WLEKPE--SVGRILDLCTGSGCIAIALAQAFENAQVDAVDISYEALEVADINITDYQLSD 190

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FS V G  +D+IV+NPPY+++  +  L  E    +P + L  G DGL   R
Sbjct: 191 RVLPIQSDVFSGVPGQKYDLIVANPPYVDAEDMADLPREF-HHEPELGLASGHDGLDVTR 249

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           TI D  S HL  +GL  VE+G N  V +  ++       +   +  GG    ++
Sbjct: 250 TILDQASEHLTDNGLLFVEVG-NSMVHMDALYPGAPFEWIEFEQ--GGLGVFVI 300


>gi|262376567|ref|ZP_06069796.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter lwoffii SH145]
 gi|262308706|gb|EEY89840.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter lwoffii SH145]
          Length = 336

 Score =  206 bits (524), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +  +     +L    
Sbjct: 60  LEWKADAEIL----------------DAKLLPSEKAEFLSLLERRINEKVPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVD---------------SALAFSLPRIEKRDVVRILDL 104
           F      +      PR     L+                 A+         +   RILD+
Sbjct: 104 FDGKPYYVDERVLIPRSPIAELIQNRFAPYCLGEHGQMGEAVNNLPENPNPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A+ N   +    +   L+SD F  +  E
Sbjct: 164 CTGSGCIAIALAYAFPEAEVDATDISKEALEVAQINTEHHDKQYQIALLESDLFEKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L ++GL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEF-HHEPELALAAGQDGLDLVRKMLAQAADYLTENGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F S   + +   K
Sbjct: 283 IVIEVG-NSEWAMCQNFNSVDFYWLQFQK 310


>gi|262372606|ref|ZP_06065885.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter junii SH205]
 gi|262312631|gb|EEY93716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acinetobacter junii SH205]
          Length = 336

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWNADSEIL----------------DAKLLPSEKAEFLSLLERRINERVPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL         +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMLEALNSLPVNPNPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAFPDSEVDATDISKEALEVASINTEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFHWLTFQK 310


>gi|187918070|ref|YP_001883633.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           hermsii DAH]
 gi|119860918|gb|AAX16713.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           hermsii DAH]
          Length = 277

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 8/243 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           ++ + +  L  ++   L + I        I+ ILG ++F  ++  ++     PR +TE L
Sbjct: 35  ILANTNKTLTKQEEHKLLSQIKNIKSGTPINYILGTKEFMGIKFYINKHVLIPRADTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL     +I+K ++ RILDL  G+G + L +       K    DIS KAL ++  N 
Sbjct: 95  VEEALI----QIKKHNLNRILDLCCGSGCIGLTIAYYLKR-KVTLSDISTKALRVSLRNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               +    +   SD    ++  F++I++NPPY+    +       +  +PRI+L G G 
Sbjct: 150 QRLKLENYIEIQHSDLLKYIDKEFELIITNPPYLNKDELKIKEKLAK--EPRIALLGFGR 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL   + I       L K+GL  VE+   Q   + +         +    D    +R L
Sbjct: 208 DGLKIPKKIIIQAKHKLTKNGLLIVEMAPWQTNSLKKFAIQEGFEYLKTIYDIENRERAL 267

Query: 261 LFC 263
           +  
Sbjct: 268 VLR 270


>gi|302869594|ref|YP_003838231.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora aurantiaca ATCC 27029]
 gi|302572453|gb|ADL48655.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micromonospora aurantiaca ATCC 27029]
          Length = 296

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 65/273 (23%), Positives = 108/273 (39%), Gaps = 17/273 (6%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A R ++      V  +   ++ +         QR  L   + R +  E +  +LG   
Sbjct: 14  VEAPRAEAEQLAAYVLDVPRGRLALADG--FTPAQRDRLDALVGRRVTREPLQHLLGSAG 71

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETELL +  +  +           ++DL +G+GA+ LA+ +E 
Sbjct: 72  FRHLELAVGPGVFVPRPETELLAEWGIERAREHA----APLVVDLCSGSGAIALAVAQEV 127

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNP 172
           P  + V V+ S  AL   + NA     +          D    D  + + G  DV++ NP
Sbjct: 128 PAARVVAVERSPAALAWLRRNAAGRAAAGDRPVEVVAADVTDPDLLADLAGRVDVLLCNP 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+   +   +  EV   DP  ++ GG DGL   R +    +  L   G   +E      
Sbjct: 188 PYVPRSV--AVPPEVAGHDPDEAVFGGADGLDVIRPVVGRAAALLRPGGAIGIEHDDTHA 245

Query: 233 VDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             V  +         V   +D  G  R     R
Sbjct: 246 AAVPALLRGDGRYDRVEEHRDLAGRPRWASASR 278


>gi|299770295|ref|YP_003732321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. DR1]
 gi|298700383|gb|ADI90948.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter sp. DR1]
          Length = 334

 Score =  205 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADAEIL----------------DAKLLPSEKAEFLSLLERRINDRIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWSMRQNFNTIDFNWLTFQK 310


>gi|301169942|emb|CBW29546.1| N5-glutamine methyltransferase [Haemophilus influenzae 10810]
          Length = 314

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 8/225 (3%)

Query: 26  PDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            +S L   ++  L   ++ R  +   +  +     F      +   T  PR     L+  
Sbjct: 73  FNSRLTPSEKETLVQLVLTRIEQRVPVAYLTNSAWFCGHEFYVDERTIIPRSPISALIQD 132

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +    +   ILDL TG+G + +A     P  +   VD+S  AL +A+ N   +
Sbjct: 133 RFEDLISQ----EPNHILDLCTGSGCIAIACAYTFPNAEVDAVDLSVDALNVAEINISRH 188

Query: 145 GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            +  R   +QS+ F ++ G  +D+IV+NPPY++   +  +  E   F+P ++L  G DGL
Sbjct: 189 KLEHRVFPIQSNLFENILGQKYDLIVTNPPYVDEEDLADMPEEF-HFEPELALGSGSDGL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  + I    S +L ++G+   E+G N  + ++  +       V 
Sbjct: 248 NITKQILKQASDYLTENGVLVCEVG-NSMISLIEQYPDVPFEWVE 291


>gi|217034309|ref|ZP_03439725.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10]
 gi|216943194|gb|EEC22661.1| hypothetical protein HP9810_491g2 [Helicobacter pylori 98-10]
          Length = 276

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 11/258 (4%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLKKERVFLHTHAYLELNHEEEEHFFEWVEKRLNDCPIEYLLESCDFYGHS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++     PRPETE+LV  AL      I +  + +I ++G G+  V ++L  E+P    
Sbjct: 83  FFVNEHVLIPRPETEILVKKALDI----ISQYHLKKIGEIGIGSACVSVSLALENPKISI 138

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DIS KALE+A  N     + +R    ++  +  +     ++VSNPPYI       L 
Sbjct: 139 HASDISPKALEVASKNIERFNLKDRVFLKKTHLWDRMP-TIQMLVSNPPYIARDYP--LE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             V   +P  +L GG+ G    + I    +         + E+GY+Q   +    E    
Sbjct: 196 KSVLK-EPHEALFGGVKGDEILKEIIFLAAELKIP--FLACEMGYDQLKSLKECLEFCGY 252

Query: 245 FLVNAFKDYGGNDRVLLF 262
                +KD  G DR  + 
Sbjct: 253 -DAEFYKDLSGFDRGFIG 269


>gi|238751946|ref|ZP_04613431.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC
           43380]
 gi|238709780|gb|EEQ02013.1| Uncharacterized adenine-specific methylase [Yersinia rohdei ATCC
           43380]
          Length = 310

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  +   ++R +     +  +     F  +   +      PR     L+   
Sbjct: 65  NARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELI--- 121

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
              +   + +     ILD+ TG+G + +A     P  +   VDIS   L + + N   +G
Sbjct: 122 -NNNFAGLIRHRPEHILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  +   ++SD F  +    +D+IV+NPPY+++  +D L  E R F+P + L  G DGL 
Sbjct: 181 MEHQVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMDDLPQEFR-FEPELGLAAGTDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 240 LARRILACAPDFLKDDGVLICEVG-NSMVHLMDQYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|295676837|ref|YP_003605361.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1002]
 gi|295436680|gb|ADG15850.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1002]
          Length = 294

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 32  NAYDEAAYLILHTLHLPLDLLEPFLDARLTTAEIEAVLKVIERRAAERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGYRFYVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VAAVLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N +   + +R    + D ++ + E  +DVI+SNPPY+ +  
Sbjct: 150 NADVDAVDLSAPALEVATRNVLDYHLDDRIALFEGDLYAPLAERRYDVIISNPPYVNAKS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E +  +P ++L GG DG+   R I       L +DG+  +EIG N++  V   F
Sbjct: 210 MQELPAEYK-HEPEMALAGGADGMDIVRRIIADARNWLTEDGVLVIEIG-NEREHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWLST---SAGDDNVFLIQ 288


>gi|114320027|ref|YP_741710.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226421|gb|ABI56220.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 309

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
            AL ++ + +     L         DS L   +R  +   + R ++    +  +     F
Sbjct: 38  NALDEAAALVLHTLRLPPDLPAAWWDSRLTASERQAIVARVKRRIEERLPLPYLTHEAWF 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L +       P +    V R+LD+GTG G + +A     P
Sbjct: 98  AGLPFYVDRRVLVPRSP---LAEYIQRGFEPWLSTDHVHRVLDVGTGGGCIAIACAYAFP 154

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
             +   VDIS  AL++A+ N   + + ER   + SD F  +  E  +++I+SNPPY+++ 
Sbjct: 155 QARVDAVDISRDALDVAEINVQRHHLEERVALIPSDLFDGLPRENRYELIISNPPYVDAR 214

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E R  +PR+ L+ G DGL   R +       L ++G+  VE+G N    +   
Sbjct: 215 DMSDLAPEFR-HEPRLGLEAGDDGLDLVRRLLARAGDFLTEEGILVVEVG-NSAPALEAA 272

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFC 263
           + +     +       G D V L  
Sbjct: 273 YPTVPFLWLEFEH---GGDGVFLLT 294


>gi|34497626|ref|NP_901841.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|34103482|gb|AAQ59844.1| probable adenine-specific methylase [Chromobacterium violaceum ATCC
           12472]
          Length = 300

 Score =  205 bits (523), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R  + +  +  +      
Sbjct: 36  NAHDEAAYLILSALQLPIDTLDPYLDARLLPEEVERVVELIRRRAEDKVPVAYLTNEAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   LA  +   E   V R LDL TG+G + + L    P
Sbjct: 96  GEFNFYVDERVLVPRSFIYELLGEPLAPWIEHPEL--VHRALDLCTGSGCLAIQLASHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDIS  ALE+A  N    G+ +R + + +D F  +E  +D+I+SNPPY+++  V
Sbjct: 154 DAEVDAVDISLDALEVAAVNVEHYGLQDRINLIHTDMFEGLEEKYDLIISNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E    +P I+L  G DGL   R I       LN+ G+  VEIG+N +  +   F 
Sbjct: 214 EELPEEYL-HEPEIALGSGEDGLDATREILRRAPEFLNERGVLLVEIGHN-RDMLEECFP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     +       G+  V L  R
Sbjct: 272 TLPFMWMET---QSGDGFVFLLTR 292


>gi|113461496|ref|YP_719565.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus somnus 129PT]
 gi|170718390|ref|YP_001783613.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus somnus 2336]
 gi|112823539|gb|ABI25628.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Haemophilus somnus 129PT]
 gi|168826519|gb|ACA31890.1| modification methylase, HemK family [Haemophilus somnus 2336]
          Length = 317

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 7/221 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
              +   +   I R  +   I  +     F  +   +      PR     L+ +     L
Sbjct: 81  TSEKNSLIQLVIARIEQRLPIAYLTNSAWFCGLEFYVDERVIIPRSPISALITNKFKGLL 140

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +    D +RILDL TG+G + +A  ++    +   VD+S  AL +A+ N   + ++ R 
Sbjct: 141 QQ----DPIRILDLCTGSGCIAIACAEQFTHAEVDAVDLSIDALNVAEINIERHNLTHRV 196

Query: 151 DTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             +QSD F ++    +D+I++NPPY++   +  + +E    +P ++L  GIDGL+  + I
Sbjct: 197 FPIQSDLFKNLPLDQYDLIITNPPYVDEEDLQDMPIEF-HHEPEMALGSGIDGLTITKEI 255

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
               + +L  +G+   E+G N  V ++  F       +   
Sbjct: 256 LANSADYLTDNGILICEVG-NSMVHLIEQFPEVPFQWLELR 295


>gi|312879995|ref|ZP_07739795.1| modification methylase, HemK family [Aminomonas paucivorans DSM
           12260]
 gi|310783286|gb|EFQ23684.1| modification methylase, HemK family [Aminomonas paucivorans DSM
           12260]
          Length = 291

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 9/266 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L ++  FL + TG +  + +V P+  + +  R      + R L  E +  ILG   F 
Sbjct: 21  RPLWEAELFLEKATGWTRREQLVFPEREVFETPRDTAEALVRRRLAGEPLDYILGEAPFG 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPE+E+LV  A+               LD G G+G +  ++  E P 
Sbjct: 81  AWAFAVGPGCLIPRPESEVLVREAVGRL------PRGGNFLDWGAGSGCLACSVALERPD 134

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESV 178
            +G  ++ S  AL  A  N   +G+ +R                  F  +++NPPYI + 
Sbjct: 135 LRGCALEASPAALRWAWENLRRHGLRDRVLLWHGRSPMELPPWTAPFHGVLANPPYIPTE 194

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               L   VRD +PR +LDGG  GL    +    +   L   G    E     ++D+++ 
Sbjct: 195 HWIALDPSVRDQEPRCALDGGDRGLEPLLSWLALLPPFLEPGGWILAETAGPWQIDLLQE 254

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                L L    +D  G  R +L+ R
Sbjct: 255 HRPEGLCLEEVLEDPFGVPRFVLWRR 280


>gi|315092953|gb|EFT64929.1| protein-(glutamine-N5) methyltransferase [Propionibacterium acnes
           HL060PA1]
          Length = 291

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC    +   Q+I       DD  R      + R    E    I+G   F  
Sbjct: 25  PAADARMLLCGALRIQPSQLIRVTSVNADDEDR--FNQMVDRCRGGEPAQYIIGHAWFRG 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL +    F PR ETEL+ + ++  +   +       ++DL TGTGA+ LA+  E P  
Sbjct: 83  LRLEVGPGVFIPRLETELVAEQSIQEARRLVMSGACPSVIDLCTGTGAIALAVASEVPGS 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV 180
           +   V++   AL   + N   +G     + L  D     +    FD++V+NPPY+     
Sbjct: 143 RVSAVEVDDAALMWTRRNLGDSG----VEVLTGDALRVPDDGRRFDIVVTNPPYLRRSDA 198

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + +P ++L  G DGL     +    +  L   GL  +E    Q+ ++V    
Sbjct: 199 SSIPGEVTEHEPDLALFSGDDGLDLPLLLIGRAAELLTPGGLFVMEHDETQREELVAAMA 258

Query: 241 SRK-LFLVNAFKDYGGNDRVLLFCR 264
                  +    D  G  R +   R
Sbjct: 259 ISDMWEQIEDHDDLAGRPRFVTARR 283


>gi|262279012|ref|ZP_06056797.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259363|gb|EEY78096.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 334

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   D+                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADAEIL----------------DAKLLPSEKAEFLSLLERRINDRIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L++                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMREALNNLPENAKPKTPHRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F+ +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEIDATDISKEALEVASINTEHHNKQYQVALLESDLFAKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWSMRQNFNTIDFNWLTFQK 310


>gi|152996265|ref|YP_001341100.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Marinomonas sp. MWYL1]
 gi|150837189|gb|ABR71165.1| modification methylase, HemK family [Marinomonas sp. MWYL1]
          Length = 304

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 113/264 (42%), Gaps = 17/264 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSV---LDDRQRFFLTNAIV-RSLKHESIHRILGWRDFY 61
           ++   +     L    +  D D +   L   ++  +   +  R  K E +  +LG   F 
Sbjct: 42  EAVHLVMGALKLP---LDFDRDMLDCALTYNEKKHILKLVQTRITKREPLPYLLGEAWFM 98

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   ++ DT  PR     L++S     L    K   + ILD+ TG+G + +A       
Sbjct: 99  GLPFKVTKDTLIPRSPIISLLESEFTPWL----KNYPLNILDMCTGSGCLGIAAALVFED 154

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +    DIS  AL++A  N V + V +R   + SD F  + G  +D+I+ NPPY+++   
Sbjct: 155 AEVDISDISEAALDVANENIVRHQVEDRVHAIHSDMFKGLSGKRYDLIICNPPYVDADDF 214

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                E  + +P ++L  G DGL+        V+ +L  DG+   E+G  +   +   + 
Sbjct: 215 HNAPAEFHN-EPELALTSGEDGLNFTHEFLTQVAHYLQDDGILVYEVGNTE-TALQAAYP 272

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     V   +  GGN  V +  +
Sbjct: 273 NIPFMWVELEQ--GGNG-VFILTK 293


>gi|87122988|ref|ZP_01078848.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Marinomonas sp. MED121]
 gi|86161725|gb|EAQ63030.1| putative HemK protein, Methylase of polypeptide chain release
           factors [Marinomonas sp. MED121]
          Length = 234

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 98/215 (45%), Gaps = 8/215 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D    L  V G+++      P+  + +  R      + + LK + I  ILG + F+ 
Sbjct: 27  PELDVQLLLAEVLGVNTSYFYTWPEKPVSEEDRARFDALLAQRLKGKPIAYILGCQAFWT 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             L +S  T  PR +TE LV+  L      I       I+DLGTGTGAV LAL  E    
Sbjct: 87  FELAVSEFTLIPRSDTECLVEIGLEL----IADVKSPSIVDLGTGTGAVALALASERHDA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VD+  +A+E+A+ N     +    D  QS WF +V    FD+IVSNPPYI+     
Sbjct: 143 NVSAVDLIPEAVELARQNNQKLNL--NVDIQQSSWFDNVATTDFDLIVSNPPYIDPEDHH 200

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +VR F+P+ +L     G S    IA     +
Sbjct: 201 LDEGDVR-FEPKSALIADQKGYSDIEIIARNAKDY 234


>gi|323342351|ref|ZP_08082583.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463463|gb|EFY08657.1| protein-(glutamine-N5) methyltransferase [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 283

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 14/263 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +       +    +  ++        N I +    E +  +LG+  FY  +L 
Sbjct: 24  ARVLMLELLRDKDLDMFAIYNEEVEAVFTNEYRNKINQLTTDEPLGYVLGYEWFYGYKLF 83

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++     PR ETE LV   L+         D   I D+  G+GA+ +AL KE    K   
Sbjct: 84  VNEGVLIPRSETEELVGHLLSDIDAHF---DTPVIADVACGSGAIGIALAKEL-NLKVYA 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCL 183
            DIS +ALE+A+ NA  N      + +Q D    +       DV+  NPPYI++     +
Sbjct: 140 SDISEEALEVARRNADYNQAD--MEIMQGDMLEPLIEKNIKLDVLACNPPYIKNTE--HI 195

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V + +P ++L GG DGL  YR + +     LN   + + EIG++    VV + +   
Sbjct: 196 QTSVLNNEPHVALFGGEDGLFFYRKVFEKAHLVLNDKAVMAFEIGFDIGEAVVALAQEF- 254

Query: 244 LFLVNA--FKDYGGNDRVLLFCR 264
                    +D  G DR++   +
Sbjct: 255 FSDAKIVLRQDINGLDRMVFVYK 277


>gi|196003016|ref|XP_002111375.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens]
 gi|190585274|gb|EDV25342.1| hypothetical protein TRIADDRAFT_24037 [Trichoplax adhaerens]
          Length = 347

 Score =  205 bits (522), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 67/274 (24%), Positives = 104/274 (37%), Gaps = 21/274 (7%)

Query: 4   LRDS---------HSFLCRVTGLS---SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI 51
           LRD+            +  V  L+       I + +  L  +Q         + L    +
Sbjct: 28  LRDAAIPEPRTSTQLIMDYVIRLNQCVRILPIQNGNPELTVQQIQLFNKLCSKRLDRMPV 87

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             I+   DF  + L +    F PRPETE LVD           + + +  LD+  G+GA+
Sbjct: 88  QYIIREWDFRYITLKMQPPVFIPRPETEELVDLINLHEFHHKRENESITFLDICCGSGAI 147

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-------SVEGL 164
            L+LL E+P    + +D    A+ + + N+    +  R      D            +  
Sbjct: 148 GLSLLCENPQATCIAIDKDPNAISLTELNSQRLNLGSRMIVEHLDVMKTEFHHGFGHDEA 207

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D IVSNPPYI S  +  L  E+  F+  ++LDGG DGL   + I       L   G   
Sbjct: 208 VDFIVSNPPYIPSKQLASLQEEIISFESSLALDGGCDGLDIVKQILHFARLCLKDKGKIW 267

Query: 225 VEIGYNQKVDVVRIFESR--KLFLVNAFKDYGGN 256
           +E+  N    +     +          FKDY   
Sbjct: 268 LEVDINHPEMIEHYLNTHDTDFTYDATFKDYTNR 301


>gi|149928199|ref|ZP_01916444.1| N5-glutamine methyltransferase [Limnobacter sp. MED105]
 gi|149823090|gb|EDM82330.1| N5-glutamine methyltransferase [Limnobacter sp. MED105]
          Length = 304

 Score =  205 bits (522), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    V    D+ +   +   L   I + +   +    I G    
Sbjct: 43  NAFDEAVYMVQSALSLPVGDVGPFWDARVTAHETNRLIRFITQRVVDRKPASYITGEAWL 102

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   L   +   E      ILD+ TG+G + +       
Sbjct: 103 QGHAFKVDERVIIPRSFIAELLADQLTPWVNAPEM--PFEILDMCTGSGCLAILAAYVFE 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             +   VD+S +AL IA+ N   + + +R   ++SD FS++ G  +D I++NPPY+    
Sbjct: 161 NAQVDAVDLSTEALSIARENIQLHDMKQRVHAIESDLFSNLNGKQYDFILTNPPYVNEAS 220

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +PR++L GG  G+   + I +   +HL   G   VE+G N+K+     F
Sbjct: 221 MKKLPPEYL-HEPRMALAGGDSGMDLIQDILEQAPKHLKDGGFLVVELG-NEKLHFEAAF 278

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +       G+++V L  +
Sbjct: 279 PHLNPIWLET---SAGDEQVFLLNK 300


>gi|238791933|ref|ZP_04635569.1| Uncharacterized adenine-specific methylase [Yersinia intermedia
           ATCC 29909]
 gi|238728564|gb|EEQ20082.1| Uncharacterized adenine-specific methylase [Yersinia intermedia
           ATCC 29909]
          Length = 314

 Score =  204 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+      
Sbjct: 72  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIAELI----NN 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           S   + +     ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  
Sbjct: 128 SFDGLIRHQPKHILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHEMEH 187

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 188 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 246

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++ ++       +    D  G D V +  +
Sbjct: 247 RILACAPDFLQDDGVLICEVG-NSMVHLMDLYPDVPFTWLEF--D-NGGDGVFMLTK 299


>gi|83645219|ref|YP_433654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hahella chejuensis KCTC 2396]
 gi|83633262|gb|ABC29229.1| Methylase of polypeptide chain release factors [Hahella chejuensis
           KCTC 2396]
          Length = 301

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 10/239 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L D ++  L  AI +  L+      ILG   F  +   ++ D   PR     L++  
Sbjct: 62  DARLVDHEKLALAEAIGKRVLQRIPTPYILGEAWFMGLPFHITQDVLIPRSPIAELLEHE 121

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L    ++  +RILDL  G+G + +A     P  + V  DIS  AL++A+ N   + 
Sbjct: 122 LQPWL----EQPPLRILDLCCGSGCIGIAAAHVFPEAEVVLADISPLALDVARRNVARHH 177

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +R   ++SD F +++G FDVI++NPPY++   +D L  E    +P + L  G+DGL  
Sbjct: 178 LGDRCKVVESDMFDALQGEFDVILTNPPYVDKPDMDSLPPEYL-HEPELGLASGVDGLDA 236

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            R I    +  L+  G    E+G N    +   +           K   G D V +  +
Sbjct: 237 ARIILARAADFLSDGGFMVCEVG-NSMEALQNSYPEIMFIFPEFEK---GGDGVFVMTK 291


>gi|332162448|ref|YP_004299025.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606536|emb|CBY28034.1| ribosomal protein L3 methyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325666678|gb|ADZ43322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. palearctica 105.5R(r)]
 gi|330861267|emb|CBX71515.1| uncharacterized adenine-specific methylase yfcB [Yersinia
           enterocolitica W22703]
          Length = 310

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+      
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELI----NN 123

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +   + +     ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 124 NFSGLIRHQPKHILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 243 RILACAPDFLQDDGVLICEVG-NSMVHLMDEYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|119952994|ref|YP_945203.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           turicatae 91E135]
 gi|119861765|gb|AAX17533.1| peptide release factor-glutamine N5-methyltransferase [Borrelia
           turicatae 91E135]
          Length = 277

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 9/248 (3%)

Query: 18  SSHQVIV-DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           S  ++I+ + +  L  ++   L+  I R      I+ IL  ++F  +   ++     PR 
Sbjct: 30  SRKELILANINKNLTKQEEHKLSCQINRIRSGTPINYILKTKEFMGIEFYINKHVLIPRE 89

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +TE LV+ AL     +I+K ++ +ILDL  G+G + L +       K    DIS KAL++
Sbjct: 90  DTECLVEEALI----QIKKHNLNKILDLCCGSGCIGLTIAHYL-KCKVTLSDISNKALKV 144

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           +  N     +    +   SD    +   F++I++NPPY+    +      ++  +PRI+L
Sbjct: 145 SLKNTQKLKLENYIEIQYSDLLKYINKEFELIITNPPYLNKDELKIKEKLIK--EPRIAL 202

Query: 197 DG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            G G DGL   + I       L K+GL  +E+   Q   +           +    D   
Sbjct: 203 LGFGKDGLEIPKKIIRQAKHKLAKNGLLIIEMAPWQTKSLKDFAIQEGFDYLKTIYDIES 262

Query: 256 NDRVLLFC 263
            +R L+  
Sbjct: 263 RERALVLR 270


>gi|163750169|ref|ZP_02157411.1| hemK family protein [Shewanella benthica KT99]
 gi|161330025|gb|EDQ01009.1| hemK family protein [Shewanella benthica KT99]
          Length = 313

 Score =  204 bits (521), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 15/268 (5%)

Query: 2   QALRDSHSFLCRVTGLSSH--QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
            A  ++ + +     L     Q ++  +  L   ++  +   I+R ++    +  +    
Sbjct: 40  NAWDEAIALVFHALHLPEALGQQVIHAN--LTCSEKHKIVELIIRRVRERLPVPYLTNKA 97

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   +      PR     ++ +  +   P +  + V R+LDL TG+  + +A   E
Sbjct: 98  MFAGLEFFVDERVLVPRSPIAEMIANRFS---PWLYHKQVNRVLDLCTGSACIAIACAYE 154

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               +   +DIS  AL++A+ N  + GV +R   ++SD FS++     +D+IVSNPPY++
Sbjct: 155 FDEAEVDALDISADALDVAQINIESLGVLDRVFPIESDIFSAIPKGPHYDLIVSNPPYVD 214

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  +  E    +P I L  G DGL   + I    + ++  DGL  VE+G N  V ++
Sbjct: 215 AEDIGDMPDEY-QHEPAIGLASGRDGLDLTKRILANAADYMTTDGLLVVEVG-NSMVHLL 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             F +     V       G D V +  R
Sbjct: 273 EQFPNVPFTWVTFE---NGGDGVFVLTR 297


>gi|254435800|ref|ZP_05049307.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
 gi|207088911|gb|EDZ66183.1| methyltransferase, HemK family [Nitrosococcus oceani AFC27]
          Length = 303

 Score =  204 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
            A+ ++ + +     L    +  +   + L + ++  +   + R ++    +  +     
Sbjct: 40  NAIDEATALILHTLHLPPRDLPPELFGAHLTEVEKHKVLALLERRIRERIPVPYLTREAW 99

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +      PR     L+    A   P      +  +LDL TG+G + +A     
Sbjct: 100 FAGLSFYVDERVLIPRSPLAELIAQRFA---PFAFPESIHSLLDLCTGSGCIAIAAAHAF 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  +    DIS +AL +A+ N   +G+  +     S  F  + G  +D+IVSNPPY+   
Sbjct: 157 PEAQVDATDISEEALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQT 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PR +L+   DGLS    I      HLN+ G+  VE+G ++   ++  
Sbjct: 217 ELAALAREY-HHEPRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEA-ALIEH 274

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   +   +  GG+  V L  R
Sbjct: 275 LPQVPFLWLEFER--GGHG-VFLLTR 297


>gi|294671088|ref|ZP_06735943.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307196|gb|EFE48439.1| hypothetical protein NEIELOOT_02796 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 299

 Score =  204 bits (521), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+VL   ++  L   I R +     +  +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDLLEPYLDAVLLPSEKCRLLALIERRVNERVPVAYLTNQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 96  GEFDFYVDERVLVPRSFIYELLGEPL---RPWIEYDELVHTALDLCTGSGCLAIQMAHHY 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VDIS  ALE+A  N    G+ +R + + +D F  +EG +D+IVSNPPY+++  
Sbjct: 153 PAADVDAVDISLDALEVAAVNVEDYGLEDRINLIHTDLFEGLEGTYDLIVSNPPYVDAES 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P  +L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 213 VAELPPEYL-HEPEEALGSGEDGLDATRQIILQAAKFLNPRGVLLVEIGHN-RDVLEAAY 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 271 PELPFTWLET---SGGDGFVFLLTR 292


>gi|77166384|ref|YP_344909.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|76884698|gb|ABA59379.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
          Length = 299

 Score =  204 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
            A+ ++ + +     L    +  +   + L + ++  +   + R ++    +  +     
Sbjct: 36  NAIDEATALILHTLHLPPRDLPPELFGAHLTEVEKHKVLALLERRIRERIPVPYLTREAW 95

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +      PR     L+    A   P      +  +LDL TG+G + +A     
Sbjct: 96  FAGLSFYVDERVLIPRSPLAELIAQRFA---PFAFPESIHSLLDLCTGSGCIAIAAAHAF 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  +    DIS +AL +A+ N   +G+  +     S  F  + G  +D+IVSNPPY+   
Sbjct: 153 PEAQVDATDISEEALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQT 212

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PR +L+   DGLS    I      HLN+ G+  VE+G ++   ++  
Sbjct: 213 ELAALAREY-HHEPRQALEAEEDGLSIVLQILRQAPEHLNEKGILIVEVGNSEA-ALIEH 270

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   +   +  GG+  V L  R
Sbjct: 271 LPQVPFLWLEFER--GGHG-VFLLTR 293


>gi|170696504|ref|ZP_02887629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia graminis C4D1M]
 gi|170138607|gb|EDT06810.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia graminis C4D1M]
          Length = 294

 Score =  204 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   + N I R   +      I      
Sbjct: 32  NAYDEAAYLVLHTLHLPLDLLEPFMDARLSAAEIDAVLNVIERRASERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGFRFYVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VSAVLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N     + +R    + D ++ + E  +DVI+SNPPY+ +  
Sbjct: 150 NADIDAVDLSAPALEVAARNVADYKLDDRIALFEGDLYAPLAERRYDVIISNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E +  +P ++L GG DG+   R I       L +DG+  +EIG N++  V   F
Sbjct: 210 MRELPAEYK-HEPEMALAGGADGMDIVRRIIADARNWLTEDGVLVIEIG-NERQHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLNLVWLST---SAGDDNVFLIQ 288


>gi|227548001|ref|ZP_03978050.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079907|gb|EEI17870.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium lipophiloflavum DSM 44291]
          Length = 283

 Score =  204 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 107/274 (39%), Gaps = 20/274 (7%)

Query: 1   MQALR------DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRI 54
           +QA R      D+      +  ++   + V+        +    T A+ R    E +  I
Sbjct: 17  LQAARVETPEVDARLLAAWLLDVAP--LAVNHTEPPPGFEE-KFTQALRRRAACEPLQHI 73

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            G   F  + L +    F PRPETE+L D A+     ++       ++DLGTG+GA+ + 
Sbjct: 74  TGCAPFGPLELAVGPGVFIPRPETEVLADWAVR----KLTGVASPVVVDLGTGSGALAIY 129

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSN 171
           +       +   V+ S  A   A+ NA   GV       D         + G  D++VSN
Sbjct: 130 IAHALDDARVTAVEASATARRYARGNAERLGVDVTVIAGDMTDPQLLDQMRGQVDLVVSN 189

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPY+       +G EV   DP  ++  G DG+   R +    +R L   G   +E     
Sbjct: 190 PPYVPLG--QDVGAEVL-HDPDEAVFSGADGMDAIRGLVPVAARLLAPGGALGIEHDDTT 246

Query: 232 KVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
              V  +  +      V A +D  G  R +   +
Sbjct: 247 SQKVQEVVAAHGQFSDVQAREDLTGRARFVTASK 280


>gi|169633548|ref|YP_001707284.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii SDF]
 gi|169152340|emb|CAP01264.1| putative adenine-specific methylase [Acinetobacter baumannii]
          Length = 334

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   DS                   D+ L   ++    + + R +        +L    
Sbjct: 60  LEWSADSEIL----------------DAKLLPSEKAEFLSLLERRINERIPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDL 104
           F+N    +      PR     L +                AL       + +   RILD+
Sbjct: 104 FFNKPFYVDERVLIPRSPIAELSEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A  N   +    +   L+SD F  +  E
Sbjct: 164 CTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHHNKQYQVALLESDLFEKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +    + +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDGLDLVRKMLAQAADYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +     +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFNWLTFQK 310


>gi|123441616|ref|YP_001005601.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|122088577|emb|CAL11372.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 310

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+      
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELI----NN 123

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +   + +     ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 124 NFSGLIRHQPKHILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHGMEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 243 RILACAPDFLQDDGVLICEVG-NSMVHLMDEYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|186476110|ref|YP_001857580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia phymatum STM815]
 gi|184192569|gb|ACC70534.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia phymatum STM815]
          Length = 295

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   + R          I      
Sbjct: 32  NAYDEAAYLVLHTLHLPIDLLEPFLDARLTSEEIDSVLKVVERRATDRVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFHVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VGAVLELCTGSGCLAILAAYAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N     + ER    + D ++ + E  +DVI++NPPY+ +  
Sbjct: 150 NADIDAVDLSPAALEVATRNVQEYELEERIALFEGDLYAPLPERRYDVIITNPPYVNAES 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +P ++L GG DG+   R I       L  DG+  VEIG N++  V   F
Sbjct: 210 MKALPPEY-QHEPAMALAGGADGMDIVRRIIANARNWLTDDGVLVVEIG-NERAHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWMST---SAGDDNVFLIQ 288


>gi|251792179|ref|YP_003006899.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter aphrophilus NJ8700]
 gi|247533566|gb|ACS96812.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Aggregatibacter aphrophilus NJ8700]
          Length = 316

 Score =  204 bits (520), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 104/243 (42%), Gaps = 8/243 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVR 64
           ++   +     L         D+ L   ++  L   + +R  K   I  ++    F  + 
Sbjct: 54  EAQQLVLATLHLPPDFPSELYDARLTMAEKSELIRLVMIRLEKRVPIAYLIHRAWFCGLE 113

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +      PR     L+    A  L      +  RILD+ TG+G + +A  ++ P    
Sbjct: 114 FYVDERVIIPRSPIGGLIQQRFAGLL----NYEPKRILDMCTGSGCIAIACAEQFPQADV 169

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCL 183
             VD+S  AL +A+ N   + +S R   +QSD FS  +E  +D+IV+NPPY++   +  +
Sbjct: 170 DAVDLSIDALNVAEMNIERHNLSHRVFPIQSDLFSHLLEEQYDLIVANPPYVDLEDLSDM 229

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             E   ++P ++L  G DGL   + I      +L  +GL   E+G N  V ++  +    
Sbjct: 230 PEEF-HYEPEMALGSGNDGLDITKEILRMAPNYLTDNGLLICEVG-NSMVHLIEQYPDIP 287

Query: 244 LFL 246
              
Sbjct: 288 FHW 290


>gi|331695520|ref|YP_004331759.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudonocardia dioxanivorans CB1190]
 gi|326950209|gb|AEA23906.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pseudonocardia dioxanivorans CB1190]
          Length = 291

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 106/270 (39%), Gaps = 16/270 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+      V G+   ++ + P  ++D          + R    E +  +LG      
Sbjct: 25  PRVDAELLAAHVVGVDRGRLPMVP--LVDRDVVETYRVLVSRRAAREPLQHVLGTAVLGP 82

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V + +    F PRPETELL++  LA    RI       ++DL TG+GA+ LA+    P  
Sbjct: 83  VEVAVGPGVFTPRPETELLLEWGLA----RIADVAHPLVVDLCTGSGALALAIAAARPDA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           +   V+    AL  A+ N      +          D   +D    +E   D++V NPPY+
Sbjct: 139 QVHAVEADPGALVWAQRNIAAQAAAGATPVTLHAADVRWTDLLVELEAKVDLVVCNPPYV 198

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  +  EV D+DP  ++ GG DGL   R +    +  L   G  ++E    Q    
Sbjct: 199 PDGTP--VPPEVADWDPPGAVFGGPDGLEIVRAVVSTAAGLLRHGGWLAIEHDDTQGESA 256

Query: 236 VRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +   RK    V    D  G  R +   R
Sbjct: 257 PGLLARRKVFSDVADHADLAGRPRFVTARR 286


>gi|15639046|ref|NP_218492.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025286|ref|YP_001933058.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum
           SS14]
 gi|3322310|gb|AAC65048.1| protoporphyrinogen oxidase (hemK) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017861|gb|ACD70479.1| protoporphyrinogen oxidase [Treponema pallidum subsp. pallidum
           SS14]
          Length = 348

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 39/295 (13%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+   L ++       ++      +           +    +  ++  +   ++F+ 
Sbjct: 40  PLLDADLILSKLLAKPRAWILAHQQDEI-ASVAHEFKRLVHLRCRGRALAYLTREKEFFG 98

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLGTGTGA 110
           +R  ++  T  P+P+TELLV+S LA    ++ K              V++I +  TG G 
Sbjct: 99  LRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEACTGCGC 158

Query: 111 VCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSD------ 156
           + +AL+        P    +  DI  +AL +A+ NA        + R   + +D      
Sbjct: 159 IAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADVRAPIP 218

Query: 157 WFSSVEG-----------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +FS  EG            +DVI +NPPY+ S     L  + R  +P  +LDGG DGL  
Sbjct: 219 FFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGADGLDL 277

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            R  A   +  L + G    E+G N      RIF++     V   KD  G +R++
Sbjct: 278 VRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 332


>gi|148689236|gb|EDL21183.1| HemK methyltransferase family member 1, isoform CRA_b [Mus
           musculus]
          Length = 276

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 13/250 (5%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
             L  +Q   +       L+   +  ILG  DF  + L +    F PRPETE LV+  L 
Sbjct: 24  KPLTPQQLECIQELCGHRLQRMPVQYILGEWDFQGLSLKMVPPVFIPRPETEELVEWVLE 83

Query: 88  FSLPR---IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
               R   +  +D   IL++G G+GA+ L+LL + P  + V VD    A+ +   NA   
Sbjct: 84  EVARRPHAVRAQDGPLILEVGCGSGAITLSLLSQLPKSRVVAVDKEEAAVSLTHENARRL 143

Query: 145 GVSERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            + +R   +  D  S             D++VSNPPYI    ++ L  E+  ++  ++LD
Sbjct: 144 QLQDRIRIICLDITSEGCCTHLLPWSPLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALD 203

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYG 254
           GG +G+     I     + LN  G   +E+       V    +S     L LV   +D+ 
Sbjct: 204 GGDEGMDIITHILTLAPQLLNASGSIFLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFC 263

Query: 255 GNDRVLLFCR 264
           G  R L   +
Sbjct: 264 GRPRFLHVQK 273


>gi|88799004|ref|ZP_01114585.1| modification methylase, HemK family protein [Reinekea sp. MED297]
 gi|88778231|gb|EAR09425.1| modification methylase, HemK family protein [Reinekea sp. MED297]
          Length = 313

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 9/238 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           ++L+  +         R+++      +L    F +    ++SD   PR     L+++   
Sbjct: 72  ALLETERAHLYERIRQRTVERVPSAYLLQEAWFCHEPFYVTSDVLIPRSPIAELIEARFE 131

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L    +    R+LDL TG+G + +A+ +  P       D+S  A+ IA SN     + 
Sbjct: 132 PWLSSAPQ----RLLDLCTGSGCIGIAMARVFPEALVDLSDLSDSAVHIATSNVAQKDLE 187

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + +  Q D F  +    +D+IVSNPPY+++  +D +  E    +PR+ L  G DGL   
Sbjct: 188 YQVNAYQGDLFDGLPQTRYDLIVSNPPYVDAEDIDDMPAEF-SHEPRLGLAAGGDGLDIV 246

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I       L +DG    E+G N  + ++  +           +  GG+   ++  R
Sbjct: 247 RRILSQAPDFLTEDGWLVCEVG-NSAMALIEAYPDVPFEWPEFSQ--GGHGVFIISQR 301


>gi|149907916|ref|ZP_01896584.1| putative adenine-specific methylase [Moritella sp. PE36]
 gi|149808922|gb|EDM68853.1| putative adenine-specific methylase [Moritella sp. PE36]
          Length = 309

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 11/232 (4%)

Query: 22  VIVDPD---SVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           + +DP    + L   +R  L   IVR +        +     F  +   +      PR  
Sbjct: 57  LDIDPQIRHARLLTSERQTLVELIVRRVNERIPAAYLTNKAWFAGLEFFIDERVLVPRSP 116

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              L+ +     L      + +RILD+ TG+G + +AL    P  +   VDI   A+E+A
Sbjct: 117 FAELIMNGFQPWL----TNEPMRILDMCTGSGCIAIALSHAFPDSEIDAVDIEHGAIEVA 172

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           + N   +GV  +   +QSD FS++EG  +D+IVSNPPY++   +D L  E +  +P I L
Sbjct: 173 EINIQEHGVENQVTPIQSDLFSNLEGLRYDMIVSNPPYVDQEDIDNLPDEFK-HEPEIGL 231

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             G DGL     +       LN  GL  VEIG N  V +   F       + 
Sbjct: 232 QSGFDGLELTLKMLAQAPDMLNDGGLLFVEIG-NSMVHMQEKFPEVPFTWLE 282


>gi|238764945|ref|ZP_04625883.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii
           ATCC 33638]
 gi|238696804|gb|EEP89583.1| Uncharacterized adenine-specific methylase [Yersinia kristensenii
           ATCC 33638]
          Length = 310

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  +   ++R +     +  +     F  +   +      PR     L+   
Sbjct: 65  NARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELI--- 121

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
              +   + +     ILD+ TG+G + +A     P  +   VDIS   L + + N   +G
Sbjct: 122 -NNNFDGLIRHQPKHILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL 
Sbjct: 181 MEHQVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPDEFR-FEPELGLAAGSDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 240 LARRILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|168021379|ref|XP_001763219.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685702|gb|EDQ72096.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 25/285 (8%)

Query: 4   LRDSHSFLCRVTG---LSSHQVI---VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           LR+    L        +   Q+     +   +L             R         ++G 
Sbjct: 48  LRELEWLLDDAVAAYHVPLEQLDNKTTNAHILLRSSIEELEEQWTRRVRNRRPFQYVVGC 107

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             + ++ L++      PRPETE ++D A   ++      +     DLGTG+GA+ +A+ +
Sbjct: 108 AHWRDLVLSVQEGVLIPRPETEQMIDLA-EAAITADNSLNNGLWADLGTGSGALAIAMAR 166

Query: 118 ESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
             P     + VD S  A+ +A+ N     + +R + +   WF+ +E   G    I+SNPP
Sbjct: 167 LLPPTGSVIAVDASPIAVAVARRNVEKYELKDRVNVVFGSWFTPLENLNGSLAGILSNPP 226

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQK 232
           YI S  +  L  EV   +P+ +LDGG DG+S  R I  G S  L   G   +E  G NQ 
Sbjct: 227 YIPSENIAGLQAEVGKHEPQSALDGGEDGMSDLRKICQGSSFALRAGGFLVLETNGGNQA 286

Query: 233 VDVVRIFESRK-------------LFLVNAFKDYGGNDRVLLFCR 264
             V     S +                +    D+ G  R ++  R
Sbjct: 287 EAVSAYLHSLRSKGDFQTLTSIPCFKHIRIVPDFAGIGRFVVATR 331


>gi|119963466|ref|YP_948326.1| HemK family modification methylase [Arthrobacter aurescens TC1]
 gi|119950325|gb|ABM09236.1| putative modification methylase, HemK family [Arthrobacter
           aurescens TC1]
          Length = 290

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 102/265 (38%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVTG--LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+      + G  L   + ++  D+   +         +        +  I G   F
Sbjct: 28  PRVDAELLAEHLLGVGLGRLRAMLLGDTPAPE----GYGELVEERAGRVPLQHITGVAYF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +    F PRPETE +V   +      +      +++DLGTG+GA+  ++  E P
Sbjct: 84  RHLELCVGPGVFIPRPETESVVQLVID----HVAGVPTPKVVDLGTGSGAIAGSIAHEVP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIES 177
             +   V+ S  A   A  N    G       +Q D   ++    G FDV+VSNPPYI S
Sbjct: 140 GAEVHAVEFSTFAHAWAAKNLEPLG----VTLVQGDLRDALPEHNGTFDVVVSNPPYIPS 195

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             +     EV   DP  +L  GG DG+      A   +R L   G   +E    Q V + 
Sbjct: 196 EAIPT-EPEVALHDPPEALYGGGADGMVLPTAAAASAARLLKPGGFFVMEHAEVQAVWIA 254

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVL 260
            + E       V    D  G +R  
Sbjct: 255 GMLERTGRWNNVTTHCDLNGKERAT 279


>gi|220935549|ref|YP_002514448.1| Methylase of polypeptide chain release factors-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996859|gb|ACL73461.1| Methylase of polypeptide chain release factors-like protein
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 296

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 9/241 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD      L   + + L    +  + G +DF  + L  S     PR ETE+L  +A+   
Sbjct: 57  LDQAAEGLLNTLVDKRLAGTPLSHLTGRQDFMGLVLKSSEAALVPRRETEILGRAAIGKL 116

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
                + +  R++DL TG G + LA+   +P  +  G D+S +A+ +A+ NA   G  + 
Sbjct: 117 ADV--EGESPRVVDLCTGCGNLALAMAVSAPRARVWGSDLSEEAVALARENAAFIGRPD- 173

Query: 150 FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              +  D  +  +     G  D++  NPPYI S  V+ L  E+   +P ++ DGG  G+ 
Sbjct: 174 VSFMAGDLAAPFDNDDFLGRMDLLTCNPPYISSAKVEQLPEEISGHEPHMAFDGGPFGIK 233

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFC 263
             + + +   R L   G    E+G  Q   +    E       V  F DY G+ R L   
Sbjct: 234 IIQRLINDAPRLLKPGGWLLFEVGLGQGEPMKHRLERNDAFDQVETFADYQGDVRALAAR 293

Query: 264 R 264
           R
Sbjct: 294 R 294


>gi|327312629|ref|YP_004328066.1| HemK familymethyltransferase [Prevotella denticola F0289]
 gi|326945265|gb|AEA21150.1| methyltransferase, HemK family [Prevotella denticola F0289]
          Length = 275

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 109/265 (41%), Gaps = 10/265 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    G+S   +     + L   +   L   + R  + E +  +LG+  F      +
Sbjct: 12  RLVLEVQFGISLTDIYTGKVNELSRDEADGLEKIMSRLERAEPVQYVLGYAMFCGRPFHV 71

Query: 68  SSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +S    PRPETE+L   ++     S   ++    +++LD+GTG+G + ++L  +      
Sbjct: 72  ASGVLIPRPETEVLCRWIEEDYNRSYCALQPPVPLQVLDVGTGSGCIAVSLALDLYNSAL 131

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIV 180
              D+S  AL IA+ N   +    R +    D        +E  +DVIVSNPPYI +   
Sbjct: 132 TAWDVSGDALLIARENI--HRWDARVELKMEDALHPSPAAMEQQWDVIVSNPPYICNRER 189

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V +++P  +L     D L  YR +A+   + L+ +G+   E        V  + 
Sbjct: 190 AAMAANVLEYEPETALFVPDDDPLQFYRAVAEYGVQTLSDEGVLYFETNPLYINKVKEML 249

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      V   KD  G  R     R
Sbjct: 250 DESGYKQVMLRKDQFGKLRFTKALR 274


>gi|326317535|ref|YP_004235207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323374371|gb|ADX46640.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 309

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 107/263 (40%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   +    GL    ++ D  SV  DRQ         R    +    +       
Sbjct: 43  NAHDEAAWLVLWRLGLPLDTLLEDAGSVAPDRQAQVAELIEQRIATRKPAAYLTREAWLQ 102

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V   +      PR     L+      S+          +LDL TG G++ +      P 
Sbjct: 103 GVPFYVDERAIVPRSFIAELL---ADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPD 159

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  G D+S  AL++A+ N   +G+  R     SD  S+V G +D+I+ NPPY+ +  + 
Sbjct: 160 VRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMA 219

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++L GG DG+   R +       L +DG+  +EIG N++      F  
Sbjct: 220 ALPQEYRA-EPELALAGGADGMDFVRRLLADAPAALREDGVLILEIG-NERAHFEAAFPH 277

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F +       G D+VLL  R
Sbjct: 278 LPAFWLET---SAGEDQVLLLTR 297


>gi|253988907|ref|YP_003040263.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780357|emb|CAQ83518.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 310

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 16/255 (6%)

Query: 17  LSSHQVIVD-PDSVLDDR----QRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P  +L  R    +R  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLFLPLDIPQEMLTARLTSTERHRIVERVLRRINERIPVAYLTNRAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+++  A  +P         ILDL TG+G + +A     P  +   VDIS
Sbjct: 110 VLVPRSPIGELINNEFAGLIP----DKPANILDLCTGSGCIAIACAYAFPEAEVDAVDIS 165

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
              L + + N   + +  R   ++SD F  +    +D+IV+NPPY+++  +  L  E R 
Sbjct: 166 ADVLVVTEQNIQNHNLEHRVIPIRSDLFRDMPPVKYDLIVTNPPYVDAEDMSDLPEEFRC 225

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P + L  G DGL   R I       L + G+   E+G N  V ++  +       +  
Sbjct: 226 -EPELGLAAGSDGLKLARRILATAPDFLTEQGILICEVG-NSMVHLIEQYPDVPFTWLEF 283

Query: 250 FKDYGGNDRVLLFCR 264
              YGG D V +  R
Sbjct: 284 E--YGG-DGVFMLTR 295


>gi|254468536|ref|ZP_05081942.1| protein methyltransferase HemK [beta proteobacterium KB13]
 gi|207087346|gb|EDZ64629.1| protein methyltransferase HemK [beta proteobacterium KB13]
          Length = 281

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 13/253 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L  V  + + Q+++     +   Q   +   +      + +  I     FY     ++S
Sbjct: 35  ILLFVLKIDNSQLLLK--KTISKAQYEKIKKFVSVRASGKPLAYIFKEWSFYGRSFYINS 92

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVD 128
               PRPETEL++D     ++      D V +LDLG G+G++ +++  E+         D
Sbjct: 93  SMLIPRPETELIIDILKEKNIL----NDNVELLDLGAGSGSIGISVKLETKNKINLHLSD 148

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           IS + +   K N        +     S+WF ++    FD+I+SNPPYI            
Sbjct: 149 ISKRCVHGIKKNLQK--FDIQAKVYLSNWFENIPNIKFDLIISNPPYISYKDPHLNE--- 203

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             F+P+ +L    DGL+    I      +LN+ GL  +E GYNQK +V  IF       V
Sbjct: 204 LHFEPKRALVSKNDGLADIHKIIKNSIHYLNRQGLIIIEHGYNQKDEVQEIFNRYNFNQV 263

Query: 248 NAFKDYGGNDRVL 260
            ++KD  G+ R+ 
Sbjct: 264 KSYKDLLGHYRIT 276


>gi|291059467|gb|ADD72202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Treponema pallidum subsp. pallidum str. Chicago]
          Length = 338

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 39/295 (13%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+   L ++       ++      +           +    +  ++  +   ++F+ 
Sbjct: 30  PLLDADLILSKLLAKPRAWILAHQQDEI-ASVAHEFKRLVHLRCRGRALAYLTREKEFFG 88

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------DVVRILDLGTGTGA 110
           +R  ++  T  P+P+TELLV+S LA    ++ K              V++I +  TG G 
Sbjct: 89  LRFRVTRATLIPKPDTELLVESVLAHVASQMMKPRSVSVHKDTSALPVLKIFEACTGCGC 148

Query: 111 VCLALLKES-----PFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSD------ 156
           + +AL+        P    +  DI  +AL +A+ NA        + R   + +D      
Sbjct: 149 IAIALMHMLRARGTPPLYVIASDICMRALAVARYNARRLLDVSANSRVRFVHADVRAPIP 208

Query: 157 WFSSVEG-----------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +FS  EG            +DVI +NPPY+ S     L  + R  +P  +LDGG DGL  
Sbjct: 209 FFSPSEGTDVVQERGVCVPYDVICANPPYVPSAQARALLQDGRG-EPLGALDGGADGLDL 267

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            R  A   +  L + G    E+G N      RIF++     V   KD  G +R++
Sbjct: 268 VRAFAHHSAAALKEGGCVFCEVGSNHAQRAARIFQAAGFATVKISKDLSGKERLI 322


>gi|307729318|ref|YP_003906542.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1003]
 gi|307583853|gb|ADN57251.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1003]
          Length = 294

 Score =  203 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   + N I R          I      
Sbjct: 32  NAYDEAAYLVLHTLHLPLDLLEPFMDARLSAAEIDAVLNVIERRATERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +   T  PR     L+   L   +   E+     +L+L TG+G + +      P
Sbjct: 92  HGFRFYVDERTIVPRSFIGELLQDGLQPYVEDPEQVSG--VLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N     + +R    + D ++ + +  +DVI+SNPPY+ +  
Sbjct: 150 NADIDAVDLSAPALEVAARNVADYKLEDRIALFEGDLYAPLAQRRYDVIISNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E +  +P ++L GG DG+   R I       L +DG+  +EIG N++  V   F
Sbjct: 210 MQELPAEYK-HEPEMALAGGADGMDIVRRIIADARNWLTEDGVLVIEIG-NERHHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLNLVWLST---SAGDDNVFLIQ 288


>gi|310287871|ref|YP_003939129.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum S17]
 gi|309251807|gb|ADO53555.1| Peptide release factor-glutamine N5-methyltransferase
           [Bifidobacterium bifidum S17]
          Length = 329

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/304 (22%), Positives = 105/304 (34%), Gaps = 45/304 (14%)

Query: 3   ALRDSHSFLCRVTG-----LSSHQVIVDPDSVLDDR------------------------ 33
              D+   L    G     +    ++ +P   L                           
Sbjct: 28  PEHDAKLLLAEACGRDLRDIDKAMLMGEPLDGLPREHASFDAPDAGAASSDSSATAGDAV 87

Query: 34  --QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
                     I R    E +  I G   F  + L +    F PRPETE +V + + +   
Sbjct: 88  TTALARFHAMIARRAAREPLQYITGHAPFRYLDLEVGPGVFIPRPETETVVQAGIDWLTR 147

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN----------A 141
             E+    RI+DL  G+GA+ L+L+ E    +   V+   +  +    N          A
Sbjct: 148 --ERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWAVEKVPRTYDWTMRNWRRISRLDPLA 205

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-I 200
             N   E  D       +  +G  D++V+NPPYI    +     EVRD DP+ +L GG  
Sbjct: 206 ADNYHLELGDATSGTTLAQFDGTIDMVVTNPPYIPEAQIPE-QPEVRDHDPKAALYGGSA 264

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DG      I    +  L   G+  +E   +Q   +V   ++          D+ G  R L
Sbjct: 265 DGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRLVSFAQANGFGQAYTGDDWTGRPRYL 324

Query: 261 LFCR 264
              R
Sbjct: 325 FAVR 328


>gi|225075804|ref|ZP_03719003.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens
           NRL30031/H210]
 gi|224952886|gb|EEG34095.1| hypothetical protein NEIFLAOT_00820 [Neisseria flavescens
           NRL30031/H210]
          Length = 299

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  + + I R   +H     +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLSIIERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+ + +   +   E   V R LDL TG+G + + +    P
Sbjct: 96  GEFDFYVDERVIVPRSFIYELLGNGIRPWIEHDEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ +R   + +D F  ++  +D+IVSNPPY+++  V
Sbjct: 154 DAQIDAVDLSLDALEVAAINIEDYGLEDRISLVHTDLFEGLDETYDLIVSNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E    +P ++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 214 EALPDEYL-HEPELALGSGEDGLDATRQIILQAAKYLNPKGVLLVEIGHN-REVLEAAYP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 272 ELPFTWLET---SGGDGFVFLLTR 292


>gi|241760258|ref|ZP_04758353.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria flavescens SK114]
 gi|241319136|gb|EER55614.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria flavescens SK114]
          Length = 299

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  + + I R   +H     +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLSIIERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   +   +   E   V R LDL TG+G + + +    P
Sbjct: 96  GEFDFYVDERVIVPRSFIYELLGDGIRPWIEHDEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ +R   + +D F  ++  +D+IVSNPPY+++  V
Sbjct: 154 DAQIDAVDLSLDALEVAAINIEDYGLEDRISLVHTDLFEGLDETYDLIVSNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E    +P+++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 214 EALPDEYL-HEPKLALGSGEDGLDATRQIILQAAKYLNPKGVLLVEIGHN-REVLEAAYP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 272 ELPFTWLET---SGGDGFVFLLTR 292


>gi|332535244|ref|ZP_08411048.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035325|gb|EGI71828.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 311

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 8/237 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  L   I   +     +  +     F  +   +      PR     L+ +    
Sbjct: 73  LTSTEKNRLAGLIAERINDCTPVPYLTNIAWFAGMPFYVDERVLIPRSPFAELISNRFTP 132

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   E + V RILDL TG+G + +AL +     +   VDIS +ALE+   N     ++E
Sbjct: 133 WLE--EPQSVNRILDLCTGSGCIAIALAQAFEQAQVDAVDISYEALEVTDININDYMLTE 190

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FS V G  +D+IV+NPPY+++  +  L  E    +P + L  G DGL   R
Sbjct: 191 RVLPIQSDVFSGVPGQKYDLIVANPPYVDAEDMADLPREF-HHEPELGLASGHDGLDVTR 249

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           TI    S HL  +GL  VE+G N  V +  ++       +   +  GG    ++  +
Sbjct: 250 TILSEASEHLTDNGLLFVEVG-NSMVHMDALYPGAPFEWIEFEQ--GGLGVFVISKK 303


>gi|94676616|ref|YP_588804.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219766|gb|ABF13925.1| protein-(glutamine-N5) methyltransferase [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 311

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 9/217 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H  +  +     F N+   +      PR     L+       LP+      + ILD+ TG
Sbjct: 87  HIPVSYLTNKAWFCNLEFYVDKRVLIPRSPIGELIQDNFRNLLPQT----PLHILDMCTG 142

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FD 166
           +G + +A+    P  K   VDIS  ALE+   N   + +  R   + SD FS +  L +D
Sbjct: 143 SGCIAIAIAYLYPEAKIDAVDISIDALEVTWHNIKQHELENRVYPICSDLFSELSPLCYD 202

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IV+NPPY++   +  L LE    +P ++L  G DGL   R I     R+L+  G+   E
Sbjct: 203 LIVANPPYVDEKSMKHLPLEFYA-EPVLALIAGKDGLEFIRRILACAPRYLSSHGILICE 261

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +G      ++  + +   F    F    G + + +  
Sbjct: 262 VGSTTMTTLIEQYPTVPFFWFELF---NGGEGIFMLT 295


>gi|325981112|ref|YP_004293514.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Nitrosomonas sp. AL212]
 gi|325530631|gb|ADZ25352.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Nitrosomonas sp. AL212]
          Length = 298

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   + +   L   Q+    D+ +   +   +   I   +K       ++     
Sbjct: 36  NAYDEAAYLILKSLYLPLDQLEPFLDARVTADECKHVLKIIDSRVKDRIPAAYLMHEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+ + L+  +  ++   V   LDL TG+G + + +    P
Sbjct: 96  GEYSFYVDERVIIPRSFIAELLPTQLSPWI--MDPDAVATTLDLCTGSGCLAILMAHSFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VDIS +AL +A  N    G+ ER   ++S+ FS++ E  +D+I+SNPPY+ +  
Sbjct: 154 NAALDAVDISAQALAVAHKNIQDYGLQERITLIESNLFSALQEKRYDLIISNPPYVNAAS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R ++P  +L  G DGL   R I    +R+L  DG+  VEIG+N +  + + F
Sbjct: 214 MAQLPQEYR-YEPENALASGTDGLDATRQILQHAARYLTDDGILVVEIGHN-REALEQAF 271

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +       G++ V L  R
Sbjct: 272 PELPFTWLET---SAGDEFVFLLQR 293


>gi|296119522|ref|ZP_06838080.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967405|gb|EFG80672.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 290

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 102/266 (38%), Gaps = 13/266 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  V G+    + +   +             I R ++ E +  I+G   F  
Sbjct: 26  ADWDARMLLAHVLGVGHMDIPLGAQAT----DIEQFDGLISRRVEREPLQHIMGTAAFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKESP 120
           + L +    F PRPETE L D A+ +      +       ++DL TG+GA+   +    P
Sbjct: 82  LDLEVGPGVFIPRPETESLADWAVNYLQKNHPRHQETPPVVVDLCTGSGALAAYISYYRP 141

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE---GLFDVIVSNPPYIE 176
             + + V++S  +L     N     V   + D    +    +    G  D++V+NPPY+ 
Sbjct: 142 DARIIAVELSDASLTFTHRNLAGTSVEIVQADVTSPELLDKLSAVVGQVDLVVTNPPYVP 201

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                 L  EV  FDP  ++  G DG+     +   +   L       +E      V V 
Sbjct: 202 EE--PNLAPEVY-FDPHDAVFSGDDGMDVIHAMMPNIVALLRPGARVGIEHDDTTSVAVQ 258

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLF 262
                  L  V+  KD GG  R +L 
Sbjct: 259 ETARDAGLVNVSPLKDLGGTARFVLA 284


>gi|290475975|ref|YP_003468870.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus bovienii SS-2004]
 gi|289175303|emb|CBJ82106.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Xenorhabdus bovienii SS-2004]
          Length = 312

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     LV++  A 
Sbjct: 70  LTSTERHCIVERVLRRINERIPVAYLTNRAWFCGHEFYVDERVLVPRSPIGELVNNQFAG 129

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP+    +   ILDL TG+G + +A   E P  +   VDIS  AL + + N   +G+  
Sbjct: 130 LLPQ----EPSTILDLCTGSGCIAIACAHEFPEAEVDAVDISGDALAVTEQNIENHGLLN 185

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F  +    +D+IV+NPPY++   ++ L  E    +P + L  G+DGL    
Sbjct: 186 RVIPILSDLFRDMPPMKYDLIVTNPPYVDEEDMNDLPDEFLR-EPELGLAAGVDGLILAC 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L ++G+   E+G N  V ++  +       +       G D V +  R
Sbjct: 245 RILANAPDFLTEEGVLICEVG-NSMVHLIDQYPDVPFTWLEFE---NGGDGVFMLTR 297


>gi|77359928|ref|YP_339503.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874839|emb|CAI86060.1| putative 50S subunit L3 protein glutamine methyltransferase
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 311

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 8/234 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  L   I   +     +  +     F N+   +      PR     L+++    
Sbjct: 73  LTSTEKNSLAGLIAERINDFTPVPYLTNIAWFANMPFYVDERVLIPRSPFAELINNRFTP 132

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   E   V RILDL TG+G + +AL +     +   VDIS +ALE+A  N     +SE
Sbjct: 133 WLE--EPESVKRILDLCTGSGCIAIALAQAFENAQVDAVDISYEALEVADINITDYQLSE 190

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD FS V G  +D+I++NPPY+++  +  L  E    +P + L  G DGL   R
Sbjct: 191 RVLPIQSDVFSGVPGQTYDLIIANPPYVDAEDMADLPREF-HHEPELGLASGHDGLDVTR 249

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           TI    S+HL  +GL  VE+G N  V +  ++       V   +  GG    ++
Sbjct: 250 TILSEASKHLTANGLLFVEVG-NSMVHMDALYPGAPFEWVEFEQ--GGLGVFVI 300


>gi|254490180|ref|ZP_05103371.1| methyltransferase, HemK family [Methylophaga thiooxidans DMS010]
 gi|224464666|gb|EEF80924.1| methyltransferase, HemK family [Methylophaga thiooxydans DMS010]
          Length = 308

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 7/231 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVI-VDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRD 59
            A  ++   +     L  +++  +  D+ L + ++  L   I + L +   +  ++    
Sbjct: 38  DAFNEASQLILSTLKLPVNELPELFLDARLTNAEKQSLLLLIEKRLEQRIPLPYLINEAW 97

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +      PR     L+D+     L      DV  ILDL TG+G + +AL    
Sbjct: 98  FAGLPFFVDERVLIPRSPFAELIDTQFQPWLSN--PDDVSAILDLCTGSGCIAIALAMAF 155

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
                  VDIS  AL +A  N   + ++++  ++QSD + S+E    +D+I+SNPPY+ +
Sbjct: 156 ENAHVDAVDISHDALAVADININKHQLNDQVRSIQSDCWQSLEPANQYDLIISNPPYVGA 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  L  E R  +P  +L+   +GL+    I    + +L  DGL  VE+G
Sbjct: 216 DEMAGLPEEYR-HEPVSALEAEDNGLALVEQILLNAADYLTDDGLLFVEVG 265


>gi|87124890|ref|ZP_01080737.1| SAM (and some other nucleotide) binding motif protein
           [Synechococcus sp. RS9917]
 gi|86167210|gb|EAQ68470.1| SAM (and some other nucleotide) binding motif protein
           [Synechococcus sp. RS9917]
          Length = 299

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/237 (34%), Positives = 122/237 (51%), Gaps = 7/237 (2%)

Query: 34  QRFFLTNAIVR-SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL-- 90
           +   L +   R  L+HE +  ++G   + ++ LT+S+    PR ETE LVD AL      
Sbjct: 60  ELSELASLWQRHRLQHEPLQHLVGRCPWRDLELTVSAAALIPRQETESLVDLALERWRAA 119

Query: 91  -PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            P    + ++R  DLGTG+GA+ +AL +  P   G  VD S  AL +A+ N   +GVS R
Sbjct: 120 QPGASPQPLLRWADLGTGSGALAVALARAFPQASGHAVDCSEAALALARLNLERHGVSAR 179

Query: 150 FDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                 DW+  +    GL  +++SNPPYI S +VD L   VR+ +PR++LDGG DGL+  
Sbjct: 180 CTLHSGDWWQPLRPWWGLLQLVLSNPPYIPSAVVDQLDPVVREHEPRLALDGGADGLAAT 239

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           R I  G    L   G   +E  ++Q   V+ +  +  L  + A  D+ G  R +   
Sbjct: 240 RLIVAGAPEALAPGGWLLIEHHHDQSAAVLDLCAAAGLDHLKAETDWQGVRRFVCAR 296


>gi|311107250|ref|YP_003980103.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310761939|gb|ADP17388.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Achromobacter xylosoxidans A8]
          Length = 298

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 10/243 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++         L    +    D+ +   +R  +   I R +        +      
Sbjct: 36  NAWDEAVYLTLHALHLPLDTLEPFLDARVLSEERNRVLELIDRRVTERLPAAYLTNEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA  +   +   V  +LD+ TG+G + +      P
Sbjct: 96  RGHRFYVDQRVIVPRSPIAELLDQGLAPWVQ--DALAVENVLDMCTGSGCLAILSALAFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           +     VD+S  ALE+A+ N    G+++R D   S+ F ++    +DVI+ NPPY+ S  
Sbjct: 154 YAHVDAVDVSPDALEVARRNVDDYGLADRLDLHASNLFDNLPPRQYDVIICNPPYVNSGS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  E R  +P+++L GG DG+   R I D   R L  +G+  +EIG+         F
Sbjct: 214 MDALPQEYR-HEPQLALAGGDDGMDLVRRILDAAPRFLTPEGVLVLEIGHE-----RDFF 267

Query: 240 ESR 242
           E+ 
Sbjct: 268 EAA 270


>gi|238797449|ref|ZP_04640948.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii
           ATCC 43969]
 gi|238718720|gb|EEQ10537.1| Uncharacterized adenine-specific methylase [Yersinia mollaretii
           ATCC 43969]
          Length = 312

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F ++   +      PR     L+++    
Sbjct: 70  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDMEYYVDERVLVPRSPIGELINNRFDG 129

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    K     ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  
Sbjct: 130 LIRHQPK----HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEH 185

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 186 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLDLAR 244

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +    D+GG D V +  +
Sbjct: 245 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEF--DHGG-DGVFMLTK 297


>gi|261379818|ref|ZP_05984391.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria subflava NJ9703]
 gi|284797504|gb|EFC52851.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria subflava NJ9703]
          Length = 299

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  + + I R   +H     +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDMLEPYLDAKLLQSEKEEVLSIIERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   +   +   E   V R LDL TG+G + + +    P
Sbjct: 96  GEFDFYVDERVIVPRSFIYELLGDGIRPWIEHDEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ +R   + +D F  ++  +D+IVSNPPY+++  V
Sbjct: 154 DAQIDAVDLSLDALEVAAINIEDYGLEDRISLVHTDLFEGLDETYDLIVSNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E    +P ++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 214 EALPDEYL-HEPELALGSGEDGLDATRQIILQAAKYLNPKGVLLVEIGHN-REVLEAAYP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 272 ELPFTWLET---SGGDGFVFLLTR 292


>gi|238759038|ref|ZP_04620208.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC
           35236]
 gi|238702715|gb|EEP95262.1| Uncharacterized adenine-specific methylase [Yersinia aldovae ATCC
           35236]
          Length = 310

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPISELINNRFDG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    K     ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  
Sbjct: 128 LIRHQPK----HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHAMEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 243 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEF--D-NGGDGVFMLTK 295


>gi|224065793|ref|XP_002189936.1| PREDICTED: similar to HemK methyltransferase family member 1
           [Taeniopygia guttata]
          Length = 305

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 21/283 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDS---VLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     +D +S    L   Q+  +     + L+   +  +LG  
Sbjct: 21  EAQESSQYIVSFVLG-AKTFQSLDSESLHTPLTALQQEQIQQLSYKRLQRMPVQYVLGEW 79

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--------DVVRILDLGTGTGA 110
           DF ++ L +    F PRPETE LV   +     + E              IL++G G+GA
Sbjct: 80  DFQDLTLKMRPPVFIPRPETEDLVSLVVEEEFQKCENSTLCFPVPVPHPVILEIGCGSGA 139

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGL 164
           + L+LL + P  + + +D    A+++ + NA    + ER   +  D   S      + G 
Sbjct: 140 IALSLLCKLPQSRVIAMDKEEAAVDLTRENAHRLQLQERIRIIHQDVSHSSAKQLLLWGP 199

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            DVIVSNPPY+    +  L  E+  ++   +LDGG DG+   +TI       L   G   
Sbjct: 200 IDVIVSNPPYVFHEDMASLDAEILCYEDLDALDGGDDGMRVIKTILALAPSLLKVSGSVF 259

Query: 225 VEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           +E+       V +  ++     L L    KD+ G  R L   +
Sbjct: 260 LEVDPRHPNMVEQWLQAHPELLLTLRAIHKDFCGKPRFLHIQK 302


>gi|198282492|ref|YP_002218813.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665801|ref|YP_002424682.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198247013|gb|ACH82606.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518014|gb|ACK78600.1| ribosomal protein L3 N-methyltransferase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 303

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 5/211 (2%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +LD  +     +   R +       I G   F  +R ++      PR   E  ++   A
Sbjct: 68  RLLDREKTTIFKHFYQREILRRPAAYITGEAWFAGLRFSVDERVLIPRSLLEPFIEEGFA 127

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              P +E   V RIL++GTG+G + + L    P  +   VDIS  AL +A +N    G+ 
Sbjct: 128 ---PWVEASQVRRILEIGTGSGCMAITLALRFPEAEVDAVDISADALSVAHANIRRYGLE 184

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R    QSD F+++EG  +D+I+SNPPY++++ +  L  E R  +PR++L  G DGL   
Sbjct: 185 DRVHLHQSDLFAALEGRRYDLILSNPPYVDAIAMAELTPEYR-HEPRLALAAGEDGLDCL 243

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             + +    HL   G+  VE G  ++  + R
Sbjct: 244 LPLLEQAPHHLEGGGVLVVETGDAEEALIRR 274


>gi|224534335|ref|ZP_03674913.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S]
 gi|224514437|gb|EEF84753.1| putative protoporphyrinogen oxidase [Borrelia spielmanii A14S]
          Length = 277

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 8/258 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V       +I +    L  +++    + I    K   IH IL  ++F  +  
Sbjct: 19  EALLILELVLKTKKELIIANIKKSLTKKEKNLFFDHIDNIEKGTPIHYILRKKEFMGIEF 78

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL+     PR +TE LV+ AL     +I++    +ILDL  G+G + L++       K +
Sbjct: 79  TLNKHVLIPRFDTECLVEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYMKK-KIM 133

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS KAL+I   N     +    + + S+    ++G  D+I++NPPY+    ++    
Sbjct: 134 LSDISIKALQIVTKNTKKLKLERFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEI--K 191

Query: 186 EVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                +P  +L G G DGL+  R I       LN +GL  +E    Q   +      +  
Sbjct: 192 NKIKKEPSRALLGFGKDGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKGF 251

Query: 245 FLVNAFKDYGGNDRVLLF 262
             +    D     R L+ 
Sbjct: 252 SHLKTIYDLEKRARALVL 269


>gi|329119295|ref|ZP_08247982.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327464642|gb|EGF10940.1| protein-(glutamine-N5) methyltransferase [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 299

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  L   I R +K    +  +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDILEPYLDARLLPSEKHRLLELIERRVKERVPVAYLTRHARQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
            +    +      PR     L+   L    P IE  ++V  +LDL TG+G + +      
Sbjct: 96  GDFDFYVDERVIVPRSFIAELLGEPL---RPWIEYDELVHNVLDLCTGSGCLAIQAACHY 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VDIS  ALE+A  N    G+ ER + + +D F  +EG +D+I++NPPY+++  
Sbjct: 153 PDAVVDAVDISLDALEVAAVNVEDYGLQERVNLIYTDLFEGLEGRYDLIITNPPYVDAES 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E R  +P  +L  G DGL   R I    +R LN  G+   EIG+N +  +   F
Sbjct: 213 VAALPPEYR-HEPEPALGSGEDGLDAVRRILPQAARFLNPHGVLLAEIGHN-RDALEATF 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  ++     GG+  V L  R
Sbjct: 271 PELPFVWLDT---SGGDGFVFLLTR 292


>gi|329912958|ref|ZP_08275852.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327545480|gb|EGF30683.1| Hypothetical adenine-specific methylase yfcB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 292

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L   ++    D+ L   +   L   I R   + +    I      
Sbjct: 32  NALDEAAYLILHTLHLPLDKLDPFLDARLLPDEINALLEVIRRRAVERQPAAYITQQAWL 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +    +      PR     L+    +  +   E   V+ IL+L TG+G + + L    P
Sbjct: 92  GDYHFYVDERVLVPRSFIAELIPDQFSPWVSDAE--SVLNILELCTGSGCLAIMLADAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 +DIS  AL +A+ N     + +R   ++S+ +++V +  +D+I+SNPPY+ S  
Sbjct: 150 NAHVDAIDISADALAVARRNVDDYELQDRITLIESNLYAAVPDKKYDLIISNPPYVNSAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  E    +PRI+L GG DG+   R I  G    L + GL  VEIG N++      F
Sbjct: 210 MDKLPKEY-QIEPRIALAGGTDGMDLVRNIVAGARERLTRGGLLVVEIG-NERAHAELAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
            + +L  +       G+D V L  
Sbjct: 268 PTLELTWMTT---SAGDDMVFLAT 288


>gi|325103647|ref|YP_004273301.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pedobacter saltans DSM 12145]
 gi|324972495|gb|ADY51479.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Pedobacter saltans DSM 12145]
          Length = 277

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 15/261 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIV---DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            ++   L  +       +     +P   +++ +   L   +      + + +I+G  DFY
Sbjct: 21  HEAEIILKYLL----EDLFAIKPNPTIDIEEHKAKELLKILDDLKVGKPVQQIIGKADFY 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  ++     PRPETE LV   + +      K   V +LD+GTG+  + +++ K  P 
Sbjct: 77  GYKFIVNEHVLIPRPETEELVHEIVKYH-----KHQNVSVLDIGTGSACISVSIKKGIPE 131

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
                +D+S +AL +AK NA+ NGV   F    +    + +   FDVIVSNPPYI     
Sbjct: 132 AIVYAIDVSREALTVAKQNALMNGVDIDFYLDDALNLDAEKYPFFDVIVSNPPYIRESEK 191

Query: 181 DCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V  F+P ++L     D L  Y  I+D   + LNK G    EI      +   + 
Sbjct: 192 KEMHSNVLSFEPHLALFVKDKDPLIFYDKISDFALKRLNKGGFLYFEINQYLAKETEDLI 251

Query: 240 ESRKLFLVNAFKDYGGNDRVL 260
             R    +   KD   N R+L
Sbjct: 252 HKRGFKTL-LIKDINSNFRIL 271


>gi|294463809|gb|ADE77429.1| unknown [Picea sitchensis]
          Length = 400

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 69/273 (25%), Positives = 106/273 (38%), Gaps = 14/273 (5%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI----VRSLKHESIHRILGWRD 59
           LR+    L       S  +    ++ +    R  + +       R  K      I+G   
Sbjct: 129 LREIEWLLEDAVDEYSPNLATF-EAPITLNMRTSVEDLYSLWSDRVEKRRPFQYIVGCSH 187

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +V L++      PRP TE L++ A   ++            DLGTG+GA+ + L +  
Sbjct: 188 WRDVVLSVQEGVLIPRPVTEELIEIA-QKAIATDGSLATGVWADLGTGSGALAIGLAQLL 246

Query: 120 -PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYI 175
            P    V VD+S  AL IA+ N     +  R +  Q  WF     V G    ++SNPPYI
Sbjct: 247 DPEGHVVAVDLSHVALSIARYNVQRYELQARVEVRQGSWFLPLQDVNGKLAGVLSNPPYI 306

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVD 234
               +  L  EV   +PR++L+GG +G+     +  G    L   G    E  G  Q   
Sbjct: 307 PEDQIPGLQAEVGKHEPRLALNGGQEGIEDLLHLCRGCISALRSGGFLGFETNGERQADA 366

Query: 235 VVRIF---ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +           V    DY G  R +   R
Sbjct: 367 LADLLSCKSDSSFRDVQIIADYAGIPRFVTAFR 399


>gi|63852198|dbj|BAD98450.1| HemK protein [Desulfovibrio vulgaris]
          Length = 335

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/312 (25%), Positives = 118/312 (37%), Gaps = 60/312 (19%)

Query: 7   SHSFLCRVTGLSSHQVIV----DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +   + RV  L    +++     P + +           +      E    ILG R+FY 
Sbjct: 26  AELLVARVLSLPRQDLLLRLALHPAAPVTQDALAHAAALLAHRAAGEPTAHILGEREFYG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++  T  PRPETELLV++AL+ +             D GTGTG +   L  E    
Sbjct: 86  RDFLVTPATLIPRPETELLVETALSLA------PRTAFFADCGTGTGCIAATLCAERDDL 139

Query: 123 KGVGVDISCKALEIAKSN--------------------------------AVTNGVSERF 150
           +G+  DIS  AL +A  N                                A      +R 
Sbjct: 140 RGMACDISPDALAVAARNIVTHLGGAMEPTVAGDSRNAADNAPTSQNAQSAARRAAFQRC 199

Query: 151 DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----------- 197
             + +D+   +  +G  D++VSNPPY+       L  EVRD +PR +L            
Sbjct: 200 QPVLADFTRPLFRDGALDLLVSNPPYVSEAEHADLTPEVRDREPRSALVPCAGEGLDDAA 259

Query: 198 ---GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE--SRKLFLVNAFKD 252
              G  DGL H R +     R L   GL  +E G  Q   V  +F+  SR    V+  +D
Sbjct: 260 AAQGRADGLGHARILVAEAGRVLRPGGLFLMEFGSAQGQAVAELFQPCSRLWAQVDIRRD 319

Query: 253 YGGNDRVLLFCR 264
               DR ++  R
Sbjct: 320 LARLDRYVVARR 331


>gi|269214146|ref|ZP_05983696.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria cinerea ATCC 14685]
 gi|269144447|gb|EEZ70865.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria cinerea ATCC 14685]
          Length = 308

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   I R + +H     +      
Sbjct: 45  NAHDEAAYLILHTLNLPLDVLDPYLDAKLLKAEKEKVLAVIERRVVEHIPAAYLTQQAWQ 104

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 105 GEFDFYVDERVIIPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 161

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 162 PDAHIDAVDVSLDALEVAGINVEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 221

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 222 VELLPEEYL-HEPELALGSGEDGLDAIRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 279

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 280 PELPFTWLET---SGGDGFVFLLTR 301


>gi|227542609|ref|ZP_03972658.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181807|gb|EEI62779.1| rRNA or tRNA methylase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 285

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 93/264 (35%), Gaps = 19/264 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+      +       +    D              I R    E +  ILG   F  
Sbjct: 33  PLVDARLIAAHLLHTDVGTLFFHDDVP------AGFWELIRRRATREPLQWILGTAPFGP 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+        K+      DL TG+GA+   +    P  
Sbjct: 87  LDLHVGPGVFIPRPETEILADWAV--------KQHAATYADLCTGSGAIAAYIAHYVPAA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           + V  + S +A   A+ N V N                      FDV+VSNPPY+     
Sbjct: 139 RVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALDPEGDGFDVVVSNPPYVPEA-- 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + DP  ++  G DG+S    +A      L   G   VE     +  V    +
Sbjct: 197 AEVSPEV-EADPHDAVFAGEDGMSCIPQLAHTAFALLKPGGCFGVEHDDATQPAVCMSLQ 255

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   +D+ G  R +   +
Sbjct: 256 EAGFTHIEPMQDFAGKPRFVTGVK 279


>gi|291288201|ref|YP_003505017.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM
           12809]
 gi|290885361|gb|ADD69061.1| modification methylase, HemK family [Denitrovibrio acetiphilus DSM
           12809]
          Length = 273

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 129/259 (49%), Gaps = 14/259 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+  F    TG+    + V+ +  +           + R    E +  ++  ++FY + +
Sbjct: 20  DAIEFASHTTGIPYTLISVNLNEHV--EITRETKQKLARINADEPLAYVIQNKNFYGLDM 77

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +  +   PRPETE+LVD AL F+     KR+ +R+LD+ TG+G +  AL+   P  +G+
Sbjct: 78  YVDENVLIPRPETEILVDEALKFA----GKRENLRVLDICTGSGCILTALMSSLPDSEGI 133

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182
           G+DIS  AL+ AK NA T+G++ER D ++ D     E   G FD++  NPPY+       
Sbjct: 134 GLDISEGALDAAKFNADTHGIAERVDFVKGDALRIKELGLGTFDIVTCNPPYLSESEW-L 192

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK-DGLCSVEIGYNQKVDVVRIFES 241
           L  +   ++P+ +L  G D +  Y+ + D +    NK  G    E+G  Q     ++ +S
Sbjct: 193 LSAKSLKYEPKNALSAGKDDILFYKKLLDMIPYLCNKNGGGAFFELGIGQ---YQKLLDS 249

Query: 242 RKLFLVNAFKDYGGNDRVL 260
                 +  KDY   +RV+
Sbjct: 250 GYAKDCSVTKDYQHIERVV 268


>gi|255324517|ref|ZP_05365634.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium tuberculostearicum SK141]
 gi|255298423|gb|EET77723.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium tuberculostearicum SK141]
          Length = 278

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      +       + +D   +            + R    E +  +LG   F  + L
Sbjct: 27  DARIMAAHLIHCGHMDIPLDQSPMPGFD--VAFDALLRRREAREPLQYVLGSAWFGPLEL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++ D A+  +       +  R++DL TGTGA+ L L    P  +  
Sbjct: 85  KVGPGVFIPRPETEVMADWAVHNA-------EGPRLVDLCTGTGALALYLAHYLPEAQVR 137

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V+++  AL   ++N    GV   + D    D  +   G  D++V+NPPY+       L 
Sbjct: 138 AVELADAALAYTQTNTRNTGVEVIQADATAGDTLADWNGTVDLLVTNPPYVP--ETPDLE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
            EV   DP  ++  G DG+     +   ++R +   G  ++E   +    V         
Sbjct: 196 PEVY-HDPHNAVFAGADGMGVITGLIPTIARLVRPGGKVAIEHDDSTSEAVQAALARHGG 254

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              +   +D  G  R +   R
Sbjct: 255 FKQIAPLQDLTGTPRFVTAVR 275


>gi|297538015|ref|YP_003673784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylotenera sp. 301]
 gi|297257362|gb|ADI29207.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylotenera sp. 301]
          Length = 301

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ +   +R  L + I + + KH     +L     
Sbjct: 40  NAYDEAVWLIMSGLHLPMDTLNNFLDARITADERIKLAHFIEKRITKHTPTAYLLKEAWL 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  +      PR     L+   L+  +   E  +     D+ TG+G + + L    P
Sbjct: 100 QGLKFYVDERVLIPRSFIAELLADGLSSWIEFPEMVESA--ADICTGSGCLGILLASVFP 157

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +   +DIS  A+++A  N     + E+   ++SD F++++G  +D+I+SNPPY+++  
Sbjct: 158 NAEIDVIDISQDAIDVANINIANYSLQEQVTAIKSDMFTALKGKKYDLIISNPPYVDAPS 217

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E ++ +P+++L  G  GL H  TI    + +LN  G+  VEIG+N +  +   +
Sbjct: 218 MAALPQEYQN-EPQLALGSGDAGLDHTHTILREAANYLNDGGILIVEIGHN-REALEAAY 275

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
            +     +       GN+ V L  +
Sbjct: 276 PNIIFNWLEV---SSGNEFVFLLTK 297


>gi|329770543|ref|ZP_08261921.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325]
 gi|328836292|gb|EGF85961.1| hypothetical protein HMPREF0433_01685 [Gemella sanguinis M325]
          Length = 251

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 70/231 (30%), Positives = 115/231 (49%), Gaps = 7/231 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRL 65
           +   L  +   ++ Q        L   Q     + I +++  +  +  ++G+  FY+ + 
Sbjct: 24  AKFLLMYMLDETAEQFSNKLSEELSVEQENRYFDLINKNINEDTPLSHLVGFDYFYDRKF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--PFFK 123
            ++ D   PR ETE L+   L +   +  K+D  +ILDL TG+G + + L KE    + +
Sbjct: 84  KVTKDVLSPRMETEELIYKVLEYI--KKSKKDSFKILDLCTGSGIIAITLKKEIVEKYTE 141

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  DIS KAL IA      N  +     ++SD F ++ G FD+I+SNPPYI       +
Sbjct: 142 IVASDISEKALSIAIE--NANNNNANITFIKSDLFDNISGKFDLIISNPPYISYKDKITI 199

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              V ++DP ++L    DG+  YR I +    +L+KDG+   EIGY+QK  
Sbjct: 200 KDNVLNYDPHLALFAEEDGIYFYRKIIENAVHYLSKDGVIFFEIGYDQKEK 250


>gi|57167734|ref|ZP_00366874.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228]
 gi|57020856|gb|EAL57520.1| protoporphyrinogen oxidase (hemK) [Campylobacter coli RM2228]
          Length = 266

 Score =  202 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 15/258 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHE---PYFELIRRFKSGEPFEYIFEKADFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L+   L       +  +   IL++G G+G + + L KE    K  
Sbjct: 77  KVKKGVLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKEL-GIKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KAL++A  NA  + V    D    D F  ++  +D I SNPPYI++     + L
Sbjct: 132 ACDINPKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYP--IDL 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG  G      I         K    + E GY+QKV + +I   +   
Sbjct: 189 WVQN-EPKEALFGGEKGYEILEEIITFSFE--RKVKFLACEFGYDQKVILKQILYQKNF- 244

Query: 246 LVNAFKDYGGNDRVLLFC 263
               F+D  G DR  +  
Sbjct: 245 QAEFFQDEQGYDRAFVAQ 262


>gi|258544124|ref|ZP_05704358.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Cardiobacterium hominis ATCC 15826]
 gi|258520632|gb|EEV89491.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Cardiobacterium hominis ATCC 15826]
          Length = 299

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 5/251 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++ + +  +  L          + L D +   L +A+ R ++    +  +     +
Sbjct: 31  NALDEAAALVLGLLKLPYDLSPAYFAARLTDDEIATLRDALERRIRERIPVPYLTRRTLY 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   LA   P+ E  +  RILDL  G+G + +    + P
Sbjct: 91  GGYEFYIDERALIPRSPIAELIARDLAPWWPQGEAPE--RILDLCCGSGCLGILAQLQQP 148

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  D+   AL++A+ N     +S+  +  Q D  ++V G FD I+ NPPY+E+  +
Sbjct: 149 QAEVVLADLDTDALDVARLNLARYNMSDVVEICQGDGLAAVRGQFDWIICNPPYVEAAEM 208

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D +  E R  +PR +L  G DGL   R +      +L + GL  +E+G +    +   + 
Sbjct: 209 DDIATEYR-HEPRQALVSGEDGLDFTRRLLHEAPDYLTERGLLVLEVGMSW-PQLEDAYP 266

Query: 241 SRKLFLVNAFK 251
                 V   +
Sbjct: 267 DAGFDWVEFER 277


>gi|291393746|ref|XP_002713409.1| PREDICTED: HemK methyltransferase family member 1-like [Oryctolagus
           cuniculus]
          Length = 350

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 73/279 (26%), Positives = 115/279 (41%), Gaps = 17/279 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP---DSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L   Q   +       L+   +  ILG  
Sbjct: 70  EARESSEYIVAHVLG-AKTFQSLKPVLWTQPLTPWQLQRIQELCSHRLQRMPVQYILGEW 128

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L     R      +    IL++G G+GA+ L+L
Sbjct: 129 DFQGLNLKMAPPVFIPRPETEELVEWVLEEVAQRPCAAGAQGGPLILEVGCGSGAIALSL 188

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSV-EGLFDVI 168
           L +    + + VD    A+ +   NA    + +R         L+  W   +  G  D++
Sbjct: 189 LSQLLESRVIAVDREEAAICLTHENAQRLQLQDRIWIVPLDVTLEGSWTHLLPWGPVDLV 248

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPY+    ++ L  E+  ++   +LDGG +G+     I     R L   G   +E+ 
Sbjct: 249 VSNPPYVFHQDMEQLAPEILSYEDAAALDGGKEGMDLITHILSLAPRLLKDSGSIFLEVD 308

Query: 229 YNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
                 V    +SR    L LV   +D+ G  R L   R
Sbjct: 309 PRHPELVSSWLQSRPGLSLSLVAVRRDFCGRPRFLHIRR 347


>gi|307545988|ref|YP_003898467.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
 gi|307218012|emb|CBV43282.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halomonas elongata DSM 2581]
          Length = 355

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 6/225 (2%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            +L   +R  +  A  R      +  +LG   F  V  ++      PR     L++    
Sbjct: 115 RLLPMERRRIVGLARERIGSRRPLPYLLGEAFFAGVPFSVDERVLIPRSPIAELIEHGFG 174

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              P        R+LDL  G+G + +A     P  +    D+S +ALE+++ N   + V 
Sbjct: 175 AWFP---VEPPARVLDLCAGSGCIGIATALHLPTCEVDLADVSAEALEVSRLNITRHDVG 231

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   + SD F  +EG  +++IVSNPPY+++  +  +  E R  +P ++L  G DGL   
Sbjct: 232 DRVRAVASDLFDGLEGRRYELIVSNPPYVDARDLATMPAEFR-HEPGLALGAGADGLDIV 290

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           R I      HL  DG+  VE+G N    +   F       +   +
Sbjct: 291 RRILREAREHLTDDGVLIVEVG-NSDRHLEAAFPEVPFMWLEFER 334


>gi|297183692|gb|ADI19817.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium EB000_37G09]
          Length = 295

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 91/266 (34%), Positives = 131/266 (49%), Gaps = 8/266 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L    G     V    D  LD      L   + R +K E + R+ G R+F++
Sbjct: 31  PRLDASWLLGLSLGRD-IAVQGHEDICLDVDACARLGALMARRMKGEPVSRLRGKREFWS 89

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               L+  T +PR +TE LV +A AF+  + +     +ILDLGTG+G + L+LL E P  
Sbjct: 90  HDFYLNEATLDPRADTECLVAAACAFAALKPQGARPAQILDLGTGSGCILLSLLLEQPDA 149

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177
           KGVG DI+  A+  A++NA   GV+ R    Q+ W   +      GLFD+I SNPPYI S
Sbjct: 150 KGVGTDIAALAIAQARANAAMLGVALRAAFHQTSWCDPIAGVFMPGLFDIITSNPPYIGS 209

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L  +V D+DP  +L  G DGL  YRT+   +   +++     +EIG  QK  V  
Sbjct: 210 Q--ALLSADVADYDPHHALFAGADGLDDYRTLLPRLPALMHRHARAFIEIGSTQKDAVSA 267

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFC 263
           +     L +     D+ G DR L+  
Sbjct: 268 LAIESGLTVCGIELDFSGRDRCLILT 293


>gi|227487968|ref|ZP_03918284.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092059|gb|EEI27371.1| protoporphyrinogen oxidase HemK [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 285

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 93/264 (35%), Gaps = 19/264 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+      +       +    D              + R    E +  ILG   F  
Sbjct: 33  PLVDARLIAAHLLHTDVGTLFFHDDVP------AGFWELVRRRATREPLQWILGTAPFGP 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+        K+      DL TG+GA+   +    P  
Sbjct: 87  LDLHVGPGVFIPRPETEILADWAV--------KQHAATYADLCTGSGAIAAYIAHYVPAA 138

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
           + V  + S +A   A+ N V N                      FDV+VSNPPY+     
Sbjct: 139 RVVAAEKSTEAARYARENGVDNLWCGDVLDTAACVSALDPEGDGFDVVVSNPPYVPEA-- 196

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             +  EV + DP  ++  G DG+S    +A      L   G   VE     +  V    +
Sbjct: 197 AEVSPEV-EADPHDAVFAGEDGMSCIPQLAHTAFALLKPGGCFGVEHDDATQPAVCMSLQ 255

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +   +D+ G  R +   +
Sbjct: 256 EAGFTHIEPMQDFAGKPRFVTGVK 279


>gi|259046348|ref|ZP_05736749.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella adiacens ATCC 49175]
 gi|259036985|gb|EEW38240.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Granulicatella adiacens ATCC 49175]
          Length = 290

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 15/250 (6%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNA---IVRSLKHESIHRILGWRDFYNVRLTLSSDTFE 73
            +  Q +++    L    +    +    ++R  K E + +I G  +F      ++ DT  
Sbjct: 45  WTLSQFLLN----LRQEAKVTFEDLEPELLRLSKFEPLQQITGVAEFLGEEFIVTKDTLI 100

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PRPETE LV    +F    +E+  V  +L++G GTG + L+L +        G DIS +A
Sbjct: 101 PRPETEELVLKVQSF----LEQCPVGNVLEIGVGTGCIILSLERLVGRHHYKGCDISEEA 156

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L +A+ N     +  + +   SD +S+V    F+ I+SNPPYI       +   VR ++P
Sbjct: 157 LIVAQKNRDKFNL--QTELFYSDVYSNVPREQFECIISNPPYIAFSEEALMDESVRLYEP 214

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFK 251
             +L    +GL+ Y  IA+ +   L   G    EIG+NQ   V RIF E+     V+  K
Sbjct: 215 IQALFAENEGLAIYEKIANRLEEFLTDSGHAFFEIGFNQGASVQRIFSEACPNRKVSIQK 274

Query: 252 DYGGNDRVLL 261
           D  G DR+++
Sbjct: 275 DIAGLDRMII 284


>gi|91784134|ref|YP_559340.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia xenovorans LB400]
 gi|91688088|gb|ABE31288.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 294

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   + N I R          I      
Sbjct: 32  NAYDEAAYLILHTLHLPLDLLEPFLDARLSAAEIDAVLNVIERRATERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +     +      PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGFHFYVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VSAVLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N     + +R    + D ++ + E  +DVI+SNPPY+ +  
Sbjct: 150 NADIDAVDLSAPALEVATRNVTDYKLDDRIALFEGDLYAPLAERRYDVIISNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R I       L  DG+  VEIG N++  V   F
Sbjct: 210 MQELPAEYR-HEPDMALAGGADGMDIVRRIIADARNWLTDDGVLVVEIG-NERQHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWLST---SAGDDNVFLIQ 288


>gi|319787543|ref|YP_004147018.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudoxanthomonas suwonensis 11-1]
 gi|317466055|gb|ADV27787.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Pseudoxanthomonas suwonensis 11-1]
          Length = 310

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A+ ++   +     L      V   S L   ++  +     R ++       ++G   F
Sbjct: 37  NAMDEATQLVLHALHLPHDLSPVYGQSRLTSAEKAKILELFRRRIEERIPAAYLVGEAWF 96

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 97  AGLSFKSDARALVPRSPIAELIENGFE---PWLGGREVHRALDLCTGSGCIAIAMGHYNP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++  GVDIS  AL +A  N      ++  + ++SD F+ + G  +++IV+NPPY+    
Sbjct: 154 DWQVDGVDISDDALALAAENKERLH-ADNVELVKSDLFAGLAGRRYELIVTNPPYVTDEE 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E  D++P + L  G DGL     I      HL++DGL   E+G +++  +V++ 
Sbjct: 213 TDALPREY-DYEPELGLRAGPDGLDLVLKILRDAPDHLSEDGLLICEVGESEQ-HLVKLL 270

Query: 240 ESRKLFLVNA 249
               L  +  
Sbjct: 271 PELDLAWIEF 280


>gi|227832890|ref|YP_002834597.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262182621|ref|ZP_06042042.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227453906|gb|ACP32659.1| methylase of peptide chain release factor [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 294

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 99/273 (36%), Gaps = 23/273 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLT----NAIVRSLKHESIHRILGWRDFY 61
           D+      +            D  LD+             + R    E +  ILG   F 
Sbjct: 28  DARLLAAHLIHCG------HMDIPLDEAPMPGFDVAYGALVGRREAREPLQHILGVAWFG 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIE------KRDVVRILDLGTGTGAVCLAL 115
            + L      F PRPETE+L D  + F               V R++DL  G+GA+ L +
Sbjct: 82  ALELEAGPGVFIPRPETEVLADWGVKFLTKLNSGETTRFNSQVPRVVDLCAGSGALALYV 141

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFDTLQSDWFSSVEGLFDVIVSNP 172
               P  +   V+++  AL   + N   +       + D   S+   ++ G  D++++NP
Sbjct: 142 AHYVPQAEVWAVELADAALAYIRRNVARHAPDLQLVQGDVTDSEILPALHGTVDLVLTNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+       L  EV   DP  ++ GG+DG+     +   ++  L   G   +E      
Sbjct: 202 PYVP--ETPDLDPEVYQ-DPHEAVFGGVDGMETITAMIPTIAALLRPGGRVGIEHDDETS 258

Query: 233 VDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
             V     +      +   KD  G  R +   R
Sbjct: 259 QQVQEALRAHGGFSDIEVLKDLTGTARFVTAER 291


>gi|209965995|ref|YP_002298910.1| modification methylase,hemK family [Rhodospirillum centenum SW]
 gi|209959461|gb|ACJ00098.1| modification methylase,hemK family [Rhodospirillum centenum SW]
          Length = 338

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 6/231 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
           A  ++   +     L   Q+    D+ L   +R  + + +   +   +    + G     
Sbjct: 71  AYDEAAFLVLETLQLPIDQLEPYLDAKLTPAERRLVADIVEARVTTRKPAPYLTGRAYIQ 130

Query: 62  NVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            V   +      PR     L+ S L          +  +V R+LDL TG+G + +     
Sbjct: 131 GVPFHVDERVIVPRSYIGELLFSDLFGGDGFTLVEDPTEVGRVLDLCTGSGCLAILAAGI 190

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
            P      VD+S +ALE+A+ N    G+ ER   +Q D F  ++G  +DVI++NPPY+ +
Sbjct: 191 FPDATVDAVDLSPEALEVARINVAEAGLEERVSLIQGDLFKPLKGRRYDVILTNPPYVSA 250

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  L  E R  +P+++L  G DGL   R I     RHL ++G    EIG
Sbjct: 251 EAMAELPPEYR-HEPQMALGSGEDGLDIVRRILAEAHRHLTEEGGLLCEIG 300


>gi|238788717|ref|ZP_04632509.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii
           ATCC 33641]
 gi|238723312|gb|EEQ14960.1| Uncharacterized adenine-specific methylase [Yersinia frederiksenii
           ATCC 33641]
          Length = 310

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 11/240 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           ++ L   +R  +   ++R +     +  +     F  +   +      PR     L+++ 
Sbjct: 65  NARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELINNR 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               +    K     ILD+ TG+G + +A     P  +   VDIS   L + + N   +G
Sbjct: 125 FDGLIRHQPK----HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIQQHG 180

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL 
Sbjct: 181 MEHQVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLK 239

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 240 LARRILACAPDFLQDDGVLICEVG-NSMVHLMDEYPDVPFIWLEF--D-NGGDGVFMLTK 295


>gi|167563203|ref|ZP_02356119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia oklahomensis EO147]
 gi|167570387|ref|ZP_02363261.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia oklahomensis C6786]
          Length = 307

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 108/270 (40%), Gaps = 16/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYITHEAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPFVE--DPALVGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--------EGLFDVIVSNP 172
                 VD+S  ALE+AK N    G+ E+      D ++ +        E  +DVI++NP
Sbjct: 153 NASVDAVDLSADALEVAKINRGDYGLDEQIALHHGDLYAPLPPSRSLDPEQRYDVIITNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNADSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLKDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +V   F    L  ++      G+D V L 
Sbjct: 271 ANVEAAFGGLDLVWLST---SAGDDGVFLI 297


>gi|302526243|ref|ZP_07278585.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
 gi|302435138|gb|EFL06954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. AA4]
          Length = 263

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 94/223 (42%), Gaps = 9/223 (4%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V  + ++ L   Q   L   + R +  E +  ILGW +F   R  ++   F PR  TELL
Sbjct: 29  VFAEDEARLLLGQPGDLAGMVERRVAGEPLEHILGWAEFAGRRFVVAPGVFVPRHRTELL 88

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  A+ F+       D   +LDL  G+GA+   +  E+P  +    D+   A+E A+ N 
Sbjct: 89  VRLAVGFA------HDQSVVLDLCCGSGALGATVAAEAPGIELHAADVEPAAVECARQNV 142

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                      L +     + G  DV+++N PY+ +  V  +  E RD +PR++LDGG D
Sbjct: 143 ---PGEVYQGDLYAPLPPRLRGRVDVLIANVPYVPTDDVALMPPEARDHEPRVALDGGAD 199

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           GL   R +       L   G    E    Q            L
Sbjct: 200 GLDVLRRVVAEAPAWLAPGGHVLFEASERQAAAATAELRRAGL 242


>gi|305433239|ref|ZP_07402395.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20]
 gi|304443940|gb|EFM36597.1| protein-(glutamine-N5) methyltransferase [Campylobacter coli JV20]
          Length = 266

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 15/258 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D   D +        I R    E    I    DF+ +  
Sbjct: 20  EALFILCEYLKKDRTWIFLNQDLEFDSK---PYFELIKRFQSGEPFEYIFEKADFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L+   L       +  +   IL++G G+G + + L KE    K  
Sbjct: 77  KVKKGVLIPRYDSEILLSQVLKIC----KNNNFQNILEIGFGSGILSIVLAKEL-GIKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KAL++A  NA  + V    D    D F  ++  +D I SNPPYI++     + L
Sbjct: 132 ACDINPKALQLALENAKLHKVEHLIDFKLCD-FKQIKENYDFIFSNPPYIQNSYP--IDL 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V++ +P+ +L GG  G      I         K    + E GY+QKV + +I   +   
Sbjct: 189 WVQN-EPKEALFGGEKGYEILEEIITFSFE--RKVKFLACEFGYDQKVILKQILYQKNF- 244

Query: 246 LVNAFKDYGGNDRVLLFC 263
               F+D  G DR  +  
Sbjct: 245 QAEFFQDEQGYDRAFVAQ 262


>gi|269837928|ref|YP_003320156.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM
           20745]
 gi|269787191|gb|ACZ39334.1| modification methylase, HemK family [Sphaerobacter thermophilus DSM
           20745]
          Length = 284

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 102/263 (38%), Gaps = 11/263 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   L  +  +    +                 + I R    E +  I G R+F  
Sbjct: 27  ARLDAEVLLRHLLSIDRATLYARLPDPAPPDTVERYRDLIARRAAGEPVAYITGHREFMG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES--P 120
           +   +      PRPETE LV+ ALA+   R   R    ++D+GTG+GA+ ++L   +  P
Sbjct: 87  LDFLVDRRVLIPRPETEYLVEWALAWLRERGGDR---LVVDVGTGSGAIAVSLAAHADDP 143

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D S  AL +A  N        R   +  D  S      D++++N PY+     
Sbjct: 144 ALRVVGSDRSLDALRVAAINRDRL-APGRVALVAGDLLSWCRPGIDLVLANLPYLRPDQA 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                    ++P ++L  G  G   Y  +   V++ L   G    EI  +Q+   +    
Sbjct: 203 HAGIA----WEPAVALYAGETGFGLYEQLLPQVAQRLRPRGAVGCEIDPSQRAIALATAR 258

Query: 241 SR-KLFLVNAFKDYGGNDRVLLF 262
           S      +    D  G DR L+ 
Sbjct: 259 SHFPTARITVRPDLAGLDRYLII 281


>gi|255066453|ref|ZP_05318308.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255049333|gb|EET44797.1| protein-(glutamine-N5) methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 299

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 113/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   + R   +H     +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLAVLERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +    +      PR     L+   L   +   E   V R LDL TG+G + + +    P
Sbjct: 96  GDFDFYVDERVIVPRSFIYELLGDNLTPWIEHPEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ ER + + +D F  +EG +D+IVSNPPY+++  V
Sbjct: 154 AAEIDAVDLSLDALEVAAINIEDYGLEERINLIHTDLFEGLEGTYDLIVSNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  E    +P ++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 214 DMLPDEYL-HEPELALGSGEDGLDATRQILLHAAKYLNPKGVLLVEIGHN-RDVLEAAYP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 272 ELPFTWLET---SGGDGFVFLLTR 292


>gi|319637772|ref|ZP_07992538.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102]
 gi|317400927|gb|EFV81582.1| hypothetical protein HMPREF0604_00161 [Neisseria mucosa C102]
          Length = 299

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  + + + R   +H     +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLSILERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   +   +   E   V R LDL TG+G + + +    P
Sbjct: 96  GEFDFYVDERVIVPRSFIYELLGDGIRPWIEHDEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ +R   + +D F  ++  +D+IVSNPPY+++  V
Sbjct: 154 DAQIDAVDLSLDALEVAAINIEDYGLEDRISLVHTDLFEGLDETYDLIVSNPPYVDAESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E    +P ++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 214 EALPDEYL-HEPELALGSGEDGLDATRQIILQAAKYLNPKGVLLVEIGHN-REVLEAAYP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 272 ELPFTWLET---SGGDGFVFLLTR 292


>gi|161524417|ref|YP_001579429.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|189350828|ref|YP_001946456.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia multivorans ATCC 17616]
 gi|221198337|ref|ZP_03571383.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2M]
 gi|221208276|ref|ZP_03581280.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2]
 gi|221215443|ref|ZP_03588407.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD1]
 gi|160341846|gb|ABX14932.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans ATCC 17616]
 gi|189334850|dbj|BAG43920.1| putative adenine-specific DNA-methyltransferase [Burkholderia
           multivorans ATCC 17616]
 gi|221164627|gb|EED97109.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD1]
 gi|221171924|gb|EEE04367.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2]
 gi|221182269|gb|EEE14670.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia multivorans CGD2M]
          Length = 302

 Score =  201 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTREAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S  ALE+A+ N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSADALEVAQINVRDYGLEDRITLHRGDLYAPLPAFRAQPDARYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I       L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAKLPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHNWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDNVFLIQ 294


>gi|150021299|ref|YP_001306653.1| HemK family modification methylase [Thermosipho melanesiensis
           BI429]
 gi|149793820|gb|ABR31268.1| modification methylase, HemK family [Thermosipho melanesiensis
           BI429]
          Length = 261

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 26/264 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           +++  L  +TG      I  P+  L +     L + I   LK   +  I   + F+    
Sbjct: 19  EAYIVLKYLTGKPKEFFIAHPEYELKE---VGLIDLINLRLKRYPLSYITREKGFFKRNF 75

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETE+LV+     ++  I+K  + +I ++G G+GA+ +++L  +    G 
Sbjct: 76  YVEEGVLIPRPETEMLVE----ITIDLIKKNKIRKIAEVGVGSGAIIISILLNT-DCTGY 130

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDC 182
             DIS KA++++K NA   GV  R   ++  +       +D   +IVSNPPY+   +   
Sbjct: 131 ATDISEKAIKVSKINAKRYGVEGRLKIVKGSYLEPFLRKWDEIELIVSNPPYV--RLDAT 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L LEV  ++P+ +L GG DGL  YR        +     +  +EIG++Q       F+ +
Sbjct: 189 LDLEV-GYEPKEALYGGKDGLDFYRNFL---KMYDFSGKIVVMEIGHDQGE----WFKRK 240

Query: 243 KLFLVNAFKDYGGNDRVLL--FCR 264
                   KDY G DR+++  F R
Sbjct: 241 GW---EVIKDYSGQDRIVIKDFRR 261


>gi|262368208|ref|ZP_06061537.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii
           SH046]
 gi|262315886|gb|EEY96924.1| protein-(glutamine-N5) methyltransferase [Acinetobacter johnsonii
           SH046]
          Length = 336

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRD 59
           +    D+                   +S L   ++  + + + R +  +     +L    
Sbjct: 60  LDWNADAEIL----------------ESKLLPSEKTEVLSLLERRINEKVPTSYLLNLAY 103

Query: 60  FYNVRLTLSSDTFEPRPETELLVD---------------SALAFSLPRIEKRDVVRILDL 104
           F      +      PR     L+                 A+         +   RILD+
Sbjct: 104 FDGKPYYVDERVLIPRSPIAELIQNRFAPYCLGENGQMGEAVNNLPENPNPKTPQRILDM 163

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
            TG+G + +AL    P  +    DIS +ALE+A+ N+  +    +   L+SD FS +  E
Sbjct: 164 CTGSGCIAIALAYAYPDAEVDATDISKEALEVAQINSEHHDKQYQVALLESDLFSKIPAE 223

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IVSNPPY+++  +  L  E    +P ++L  G DGL   R +      +L +DGL
Sbjct: 224 NQYDLIVSNPPYVDAEDMADLPEEF-HHEPELALAAGQDGLDLVRKMLAQAPDYLTEDGL 282

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +E+G N +  + + F +   + +   K
Sbjct: 283 IVIEVG-NSEWAMRQNFNTVDFYWLQFQK 310


>gi|33863927|ref|NP_895487.1| SAM-binding motif-containing protein [Prochlorococcus marinus str.
           MIT 9313]
 gi|33635511|emb|CAE21835.1| hemK family protein [Prochlorococcus marinus str. MIT 9313]
          Length = 306

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 21  QVIVDPDS-VLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           Q+ +DP   VL +R    L     + L H   +  ++G+  + +  L +S+    PR ET
Sbjct: 45  QLYLDPRRSVLLERSLDQLEMIWKQHLDHHIPLQHLIGYCPWRDFELEVSAVALIPRQET 104

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLVD AL      + ++   R  DLGTG+GA+ +AL +  P ++G  VD S +AL +AK
Sbjct: 105 ELLVDFAL----QALVRKPFGRWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK 160

Query: 139 SNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            N         +   Q  W+  +    G F +++ NPPYI  V++  L   VRD +P ++
Sbjct: 161 RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEVVMAQLEPVVRDHEPHLA 220

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG DGL   R I  G  + L   G   +E  ++Q   V+ +   + L  V+   D  G
Sbjct: 221 LYGGADGLVATRQIIAGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVDYKSDLLG 280

Query: 256 NDRVLLFC 263
             R  +  
Sbjct: 281 VRRFAIAR 288


>gi|254805411|ref|YP_003083632.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha14]
 gi|254668953|emb|CBA07226.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha14]
          Length = 303

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+ + L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIIPRSFIYELLGNGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|260906197|ref|ZP_05914519.1| methyltransferase [Brevibacterium linens BL2]
          Length = 295

 Score =  201 bits (513), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 109/272 (40%), Gaps = 18/272 (6%)

Query: 6   DSHSFLCRVTGLS-----SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           D+ + L    GL        +++ D    +           I R  +   +  I+G   F
Sbjct: 23  DAAALLAHAWGLDASGVARRRLLGD---TVPAEVTATFAQLIDRRRQRTPLQHIIGVAAF 79

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +    F PRPETELLV   L   L R +   V  I+DL +G+GA+ L+L  E  
Sbjct: 80  RHLELQVGPGVFVPRPETELLVTEVLEE-LERQQNTHVPFIIDLCSGSGAITLSLATEHR 138

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWF------SSVEGLFDVIVSNPP 173
             + +GV+   +AL  +  N     + E   D +  D          +    DV+V+NPP
Sbjct: 139 RLRAIGVERETQALNWSLMNLAAVDLGESSVDLVSGDATTFAEDSPQLWASADVVVTNPP 198

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+    V     EVR+ DP  +L GG  GL     I     + L   G   +E    Q  
Sbjct: 199 YVPDTAVPR-DAEVREHDPEAALYGGATGLEIPGLIIIQAEKLLRPGGFFIMEHSEEQGP 257

Query: 234 DVVR-IFESRKLFLVNAFKDYGGNDRVLLFCR 264
                I  +  L     + DY G DR  +  R
Sbjct: 258 AARELIMSTASLRQAATYPDYTGRDRYTVAHR 289


>gi|293391987|ref|ZP_06636321.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952521|gb|EFE02640.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 316

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 8/249 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDF 60
            A  ++H  +     L         ++ L   ++  L   + +R  K   I  ++    F
Sbjct: 50  NAWDEAHQLVLSCLHLPPDFPAELYNARLTVAEKLELIRLVMIRLEKRLPIAYLIHSAWF 109

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+    A  LP+  K    RILD+ TG+G + +A  ++ P
Sbjct: 110 CGLEFYVDKRVIIPRSPIGALIQDGFAGLLPKAPK----RILDMCTGSGCIAIACAEQFP 165

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVI 179
                 VD+S  AL +A+ N     +S R   +QSD FS  +E  +D+IV+NPPY++   
Sbjct: 166 EADVDAVDLSLDALNVAEINIERYNLSHRVFPIQSDLFSQLLEEQYDLIVTNPPYVDLDD 225

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E   ++P ++L  G DGL+  + I      +L  DG+   E+G N  V ++  F
Sbjct: 226 RSDMPEEF-HYEPEMALGSGDDGLTITKQILRQAVNYLTDDGVLVCEVG-NSMVHLIEQF 283

Query: 240 ESRKLFLVN 248
            +     + 
Sbjct: 284 PNVPFNWLE 292


>gi|37527075|ref|NP_930419.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36786508|emb|CAE15564.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 314

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F      +      PR     L+++  A 
Sbjct: 72  LTSTERHRIVERVLRRINERIPVAYLTNRAWFCGHEFYVDERVLVPRSPIGELINNEFAG 131

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +P         ILDL TG+G + +A     P  +   VDIS   L + + N   + +  
Sbjct: 132 LIP----EQPANILDLCTGSGCIAIACAYAFPEAEIDAVDISADVLAVTEQNIQNHSLDH 187

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   ++SD F  +    +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R
Sbjct: 188 RVIPIRSDLFRDMPPVKYDLIVTNPPYVDAEDMSDLPEEFRR-EPELGLAAGSDGLKLAR 246

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L + G+   E+G N  V ++  +       +     YGG D V +  R
Sbjct: 247 RILATAPNFLTERGVLICEVG-NSMVHLIEQYPDVPFTWLEFE--YGG-DGVFMLTR 299


>gi|320167100|gb|EFW43999.1| Hemk1 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 459

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 74/301 (24%), Positives = 115/301 (38%), Gaps = 47/301 (15%)

Query: 2   QALRDSHSFLCRVT-----------GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES 50
           +A   +   L                +S   +       L         + + + L+ + 
Sbjct: 156 EAELGAEYLLAAALFGSSAPRSTLTNVSPAVL----RQALTGESFVRFISLLNQRLEGKP 211

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK--------------- 95
           I  ILG  DF    L +    F PRPETE LVD  +      +                 
Sbjct: 212 IQHILGEWDFGLHTLHMHPRVFIPRPETEKLVDMVVKDLKSTLPSSAENNTSSWINTTPS 271

Query: 96  ------------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                            IL++G GTGA+ L++L E P    + +D++  A E+ + NA  
Sbjct: 272 STPSALQISLLVNRPPCILEVGPGTGAIGLSILAELPGLHYLALDVNPFACELTRVNAQR 331

Query: 144 NGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            G+  R     +  + F+ +EG FD IVSNPPYI S  +  L +EVR FDP ++LDGG++
Sbjct: 332 LGLESRTAVHHVAFEQFTLLEGQFDAIVSNPPYIPSREISELDIEVRGFDPHVALDGGVE 391

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDR 258
           GL     +    +  L   G   +E+  +    +     S     L  +    D     R
Sbjct: 392 GLDVIVQLLKRAALMLVPHGKLWLEVDESHPPKIESWLSSHPSCGLRYLKTHADCFDVPR 451

Query: 259 V 259
            
Sbjct: 452 F 452


>gi|289706368|ref|ZP_06502726.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micrococcus luteus SK58]
 gi|289556863|gb|EFD50196.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Micrococcus luteus SK58]
          Length = 300

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 110/274 (40%), Gaps = 22/274 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD--PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+   L  V GL    ++      +V +  Q       + R    E +  + G   F
Sbjct: 25  PRVDAELLLAHVLGLDRGALLARVFAGAVAEPAQAAAFEALVGRRAAREPVQHLTGVAHF 84

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL----- 115
           + + L +    F PRPETELLV++ +A    R        ++DL TG+GA+  A+     
Sbjct: 85  HGLDLAVGPGVFIPRPETELLVETVVADLAAR---PTADVVVDLCTGSGAIAAAVAAWGE 141

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
            +  P      V++   A + A+ N    G     D  Q D       +EG  DV+VSNP
Sbjct: 142 ARGRPLA-VAAVELDPTAADWARRNLALRG----VDLRQGDALVACPDLEGRVDVVVSNP 196

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+    V     E R  DP  +L GG   GL   R IA   +  L   GL ++E    Q
Sbjct: 197 PYVPEAEVPA-QPEARL-DPARALYGGDAPGLRVPRAIAHRAADLLAPGGLFAMEHHETQ 254

Query: 232 KVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
              ++    +      V   +D  G DR L   R
Sbjct: 255 GPALLAALGADPRFTGVRVHQDLTGRDRFLTARR 288


>gi|237748727|ref|ZP_04579207.1| modification methylase HemK [Oxalobacter formigenes OXCC13]
 gi|229380089|gb|EEO30180.1| modification methylase HemK [Oxalobacter formigenes OXCC13]
          Length = 302

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L   ++    D+ L   +   + N I R   +      +      
Sbjct: 36  NAWDEAVFLILHTLSLPLDELDPFLDAKLLPEEIENVVNIIDRRADERIPAAYLTNEAFL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+     FS   I+   V  IL+L TG+G + + L     
Sbjct: 96  QGYSFYVEKGVIIPRSFLAELI--VEQFSPWIIDPEGVTDILELCTGSGCLAIMLADVFE 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 V++S  AL IA++N     + +R     +D +  + +  + +IV+NPPY+    
Sbjct: 154 NATVDAVELSPAALGIAQTNINNYQLKDRVKLHHADLYDGIPDKQYQLIVTNPPYVNQSS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +D L  E    +P+++L GG DG+   R I       L  DGL  VEIG N+  + +  F
Sbjct: 214 MDDLPPEYM-HEPQMALAGGFDGMDIVRRIVRTAGEKLTDDGLLIVEIG-NEAENAIAAF 271

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
              +L  ++     GG+DRV L  
Sbjct: 272 PELELTWLST---SGGDDRVFLLT 292


>gi|126641738|ref|YP_001084722.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acinetobacter baumannii ATCC 17978]
          Length = 251

 Score =  201 bits (512), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 20/229 (8%)

Query: 41  AIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS--------------- 84
            + R +        +L    F+N    +      PR     L++                
Sbjct: 1   MLERRINERIPTSYLLNLAYFFNKPFYVDERVLIPRSPIAELIEQRFAPYCLDENGQMRE 60

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL       + +   RILD+ TG+G + +AL    P  +    DIS +ALE+A  N   +
Sbjct: 61  ALNNLPENTKPKTPQRILDMCTGSGCIAVALAYAYPDAEVDATDISKEALEVASINVEHH 120

Query: 145 GVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
               +   L+SD F  +  E  +D+IVSNPPY+++  +  L  E    +P ++L  G DG
Sbjct: 121 NKQYQVALLESDLFEKIPAENQYDLIVSNPPYVDAEDMADLPEEFL-HEPELALAAGQDG 179

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   R +    + +L +DGL  +E+G N +  + + F +     +   K
Sbjct: 180 LDLVRKMLAQAADYLTEDGLIVIEVG-NSEWAMRQNFNTVDFNWLTFQK 227


>gi|298369402|ref|ZP_06980720.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria sp. oral taxon 014 str. F0314]
 gi|298283405|gb|EFI24892.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria sp. oral taxon 014 str. F0314]
          Length = 299

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   I R +     +  +      
Sbjct: 36  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLGLIERRVTERVPVAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES 119
            +    +      PR     L+       LP IE  ++V R LDL TG+G + + +    
Sbjct: 96  GDFDFYVDERVIVPRSFIYELL---GDPLLPWIEHNELVHRALDLCTGSGCLAIQMAHHY 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  ++  +D+IVSNPPY+++  
Sbjct: 153 PAAEIDAVDLSLDALEVAAVNIEEYGLEERIRLIHTDLFEGLDDTYDLIVSNPPYVDAES 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E R  +P ++L  G DGL   R I    ++HLN  G+  VEIG+N +  +   +
Sbjct: 213 VETLPDEYR-HEPELALGSGTDGLDATRRIILHAAKHLNPRGVLLVEIGHN-RDILEAAY 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 271 PELPFTWLET---SGGDGFVFLLTR 292


>gi|209521621|ref|ZP_03270317.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. H160]
 gi|209497948|gb|EDZ98107.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. H160]
          Length = 294

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          I      
Sbjct: 32  NAYDEAAYLILHTLHLPLDLLEPFLDARLTTAEIEAVLKVIERRAADRVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+   L   +   E+  V  +L+L TG+G + +       
Sbjct: 92  HGYRFHVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VSAVLELCTGSGCLAILAAHAFQ 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N +   + +R    + D ++ + E  +DV++SNPPY+ +  
Sbjct: 150 NADVDAVDLSAPALEVATRNVMDYHLDDRIALFEGDLYAPLAERRYDVVISNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E +  +P ++L GG+DG+   R I       L +DG+  +EIG N++  V   F
Sbjct: 210 MQELPAEYK-HEPEMALAGGMDGMDIVRRIIADARNWLTEDGVLVIEIG-NEREHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWLST---SAGDDNVFLIQ 288


>gi|116671164|ref|YP_832097.1| HemK family modification methylase [Arthrobacter sp. FB24]
 gi|116611273|gb|ABK03997.1| modification methylase, HemK family [Arthrobacter sp. FB24]
          Length = 298

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 108/269 (40%), Gaps = 22/269 (8%)

Query: 3   ALRDSHSFLCRVTGLS----SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
              D+      + G+        ++VD  +             +    +   +  I G  
Sbjct: 28  PRVDAELLADHLLGVGLGRLRAMLLVDSPAP------EGYAELVAERARRVPLQHITGVA 81

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALL 116
            F  ++L +    F PRPETE +V   + +     R++ R   +++DLGTG+GA+  ++ 
Sbjct: 82  HFRYLQLAVGPGVFIPRPETESVVQLVIDWLGDRDRLQGRARPKVVDLGTGSGAIAGSIA 141

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
            E P  +   V+ S  A   A+ N    G       L+ D   ++    G FDV+VSNPP
Sbjct: 142 LEVPGAEVYAVEFSEFAHAWAERNLRPLG----VTLLRGDLRDALPEHNGTFDVVVSNPP 197

Query: 174 YIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           YI +  +     EV   DP  +L  GG DG+      A   +R L   G   +E    Q 
Sbjct: 198 YIPAEAIPN-EPEVALHDPPEALYGGGADGMELPTAAAASAARLLVPGGYFVMEHAEVQA 256

Query: 233 VDVVRIFESRKLF-LVNAFKDYGGNDRVL 260
             +  + +   L+  V    D  G +R  
Sbjct: 257 TWIAAMMKKSGLWSDVTTHLDLNGRERAT 285


>gi|161870501|ref|YP_001599673.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis 053442]
 gi|161596054|gb|ABX73714.1| adenine specific methylase, putative [Neisseria meningitidis
           053442]
          Length = 291

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 28  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 87

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+ + L    P IE  ++V   LDL TG+G + + +    
Sbjct: 88  GEFDFYVDERVIIPRSFIYELLGNGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 144

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 145 PDAHIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 204

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P+++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 205 VELLPEEYL-HEPKLALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 262

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 263 PELPFTWLET---SGGDGFVFLLTR 284


>gi|255018346|ref|ZP_05290472.1| hypothetical protein LmonF_12686 [Listeria monocytogenes FSL
           F2-515]
          Length = 195

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/192 (34%), Positives = 91/192 (47%), Gaps = 6/192 (3%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P       DIS
Sbjct: 1   VLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTASDIS 56

Query: 131 CKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +   V  
Sbjct: 57  APALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLK 116

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVN 248
            +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S     V 
Sbjct: 117 NEPSLALFAENDGLAIYERFVDNLKYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHTTVV 176

Query: 249 AFKDYGGNDRVL 260
             KD    DR +
Sbjct: 177 IHKDINSKDRYV 188


>gi|326427282|gb|EGD72852.1| hypothetical protein PTSG_04580 [Salpingoeca sp. ATCC 50818]
          Length = 301

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 20/264 (7%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  V G  +       +  +   Q+    +   R    E +  +LG  DF +  LT
Sbjct: 41  AREIVYHVLGTRASS---SCEMEVTPEQQERAHSLAHRRACREPLQYVLGEWDFRDQTLT 97

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + S    PRPETE+LVD        ++ ++  +  L++G G+GA+ L+LL E+P +   G
Sbjct: 98  MRSPVLIPRPETEVLVDLI----QRKLRQQHGLHFLEIGVGSGAISLSLLHENPSWTATG 153

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPPYIESVI 179
           +D+   A+++ + NA   GV++R    + D  ++         G FD +VSNPPYI    
Sbjct: 154 IDLDDAAIQLTQHNASRCGVADRLTLHKQDITTATPSSPCFSSGPFDFVVSNPPYIRRDE 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL-NKDGL--CSVEIGYNQKVDVV 236
           +  L  E+R ++  ++L GG DGL   R I D     +    G     +E+   Q   V 
Sbjct: 214 MPKLAPELR-YENDMALCGGEDGLDVTRAILDIAPHIISRTGGARQLWLELSPPQCSAVA 272

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
           R+       +++   D  G++R +
Sbjct: 273 RLVP--PGCVLHVHLDQYGHERFV 294


>gi|121635295|ref|YP_975540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis FAM18]
 gi|304386871|ref|ZP_07369133.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|120867001|emb|CAM10764.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|254672107|emb|CBA04814.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha275]
 gi|261392121|emb|CAX49619.1| putative adenine-specific methylase [Neisseria meningitidis 8013]
 gi|304339030|gb|EFM05122.1| protein-(glutamine-N5) methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|325131159|gb|EGC53879.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis OX99.30304]
 gi|325133019|gb|EGC55693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M6190]
 gi|325138683|gb|EGC61236.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis ES14902]
 gi|325144902|gb|EGC67188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240013]
          Length = 303

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+ + L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIIPRSFIYELLGNGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|294155814|ref|YP_003560198.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
 gi|291600378|gb|ADE19874.1| bifunctional methyltransferase [Mycoplasma crocodyli MP145]
          Length = 241

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/240 (25%), Positives = 115/240 (47%), Gaps = 18/240 (7%)

Query: 28  SVLDDRQRFFL-----TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L +++++ L        I +  K   + +I+G+ ++ NV++ +  +   PR ETE L+
Sbjct: 6   ELLKEKRKYGLKQTINQEEINQISKQVPVQKIIGYIEYANVKINIQKNVLIPRYETEELI 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             AL         ++  ++LDL  G+G + +AL   +   +    DI   A+E +K N +
Sbjct: 66  FLALKNI------KNDSKVLDLCCGSGFIGIALKFNNKNLQVTLSDIDDNAIEQSKINTL 119

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N V  +   ++SD F +++  FD I+SNPPY+       +   V + +P  +L    +G
Sbjct: 120 ENNV--KVKIIKSDLFENIDEKFDCIISNPPYLMKSE--NISNNVLNHEPHHALFADDNG 175

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L  Y+ I     ++LNK+G    EI        ++I ++        +KD  G +R ++ 
Sbjct: 176 LFFYKEIMKQSKKYLNKNGKLIFEINPLHHDFWIQIVKNN---DAKIYKDISGLERFVII 232


>gi|228469583|ref|ZP_04054576.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas uenonis 60-3]
 gi|228308933|gb|EEK17608.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Porphyromonas uenonis 60-3]
          Length = 302

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 17/269 (6%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  I+G   F +  L
Sbjct: 37  SEMLLQHITKLSQTNYLLDRKVRQLSDTEATWLCQALERLTHDEPIQYIVGVAPFGSFDL 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  LA            R+LD+G G+  + + +  E P +   
Sbjct: 97  TVGRGVLIPRPETAELCELILAR---HPATEAPQRLLDVGCGSACIPIYIGSERPQWSLY 153

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPPYIES 177
            +D S +AL  A+ N    GV+      + D F+  +G          +++VSNPPYI  
Sbjct: 154 AMDQSEQALGYAEQNVRQTGVA--VQLFRGDLFAWCQGKGIPAKLPPINLLVSNPPYIPE 211

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVD 234
                +   V   +PR +L     D L +YR +   V +  +         E  +    +
Sbjct: 212 CDQATMRPNVLVGEPREALFVPDADPLRYYRALVALVPQIRSPQAPLTLYCETHHQLAHE 271

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           V  + E          KD  G +R +   
Sbjct: 272 VAALCEQAGAISSEVLKDLTGRERFVQAT 300


>gi|146329306|ref|YP_001209561.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dichelobacter nodosus VCS1703A]
 gi|146232776|gb|ABQ13754.1| modification methylase, HemK family [Dichelobacter nodosus
           VCS1703A]
          Length = 300

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 7/252 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
             L ++ + +  +  L          + L D++   L +A  R ++    +  +     +
Sbjct: 31  NPLDEAAALVLGILQLPFSLDASYWGAHLTDKECALLADAFRRRIEERLPVPYLTQRTLY 90

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+D  LA   P  +  D  RILDL  G+G + +      P
Sbjct: 91  GGYEFYIDERALIPRSPIAELIDRGLA---PYWQGDDPERILDLCCGSGCIGILAKYHYP 147

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
             + V  DI  +AL +A  N     + +   + +QSD F++V G FD I+ NPPY+E+  
Sbjct: 148 DAEVVLADIDEQALAVAAINLQRAAMEDDGVEIVQSDIFTAVTGTFDWILCNPPYVEAEE 207

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  +  E    +PR +L  G DGL   R I    + +LN +G+  +E+G + + ++ + +
Sbjct: 208 MATIAAEY-CHEPRQALVSGADGLDLTRRILSQAAHYLNDNGVLILEVGMSWQ-NLEQAY 265

Query: 240 ESRKLFLVNAFK 251
                  V+  +
Sbjct: 266 PEIGFDWVDFER 277


>gi|71892272|ref|YP_278006.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|71796378|gb|AAZ41129.1| N5-glutamine methyltransferase, modifies ribosomal protein L3
           [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 304

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSD 70
           L S  + ++       + L  R+R  +   +   + K   +  +     F  ++  +   
Sbjct: 49  LPSLYLPINIPTQIYQAHLTSRERSKIIKLVNYRINKRIPVPYLTYQAWFCGLKFYVDKR 108

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F PR     L+ S     LP        RILD+GTG+G + +A+    P  +   VDIS
Sbjct: 109 VFIPRSPIGELITSCFNDLLPYY----PYRILDIGTGSGCIAVAIATVYPKSEIDAVDIS 164

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL++A+ N     +  R   + SD FS++    +D+I++NPPY+++  +  L  E   
Sbjct: 165 IDALKVAEHNIKLYNLEHRVFPIHSDLFSNLPQLKYDLIITNPPYVKNSDIYKLPKEF-H 223

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++P ISL    DGL   + I   V  HLN +G    E+G  +   + R + +     +  
Sbjct: 224 YEPVISLSADNDGLKIIQKILMNVIHHLNTNGTLICEVGSTKMALIER-YPNIPFRWLRL 282

Query: 250 FKDYGGNDRVLLFC 263
                G + V +  
Sbjct: 283 ---SNGGEGVFMLT 293


>gi|325963839|ref|YP_004241745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469926|gb|ADX73611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 295

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 100/265 (37%), Gaps = 20/265 (7%)

Query: 3   ALRDSHSFLCRVT--GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+      +   GL   + ++  D+   D         +        +  I G   F
Sbjct: 28  PRVDAELLADHLLQVGLGRLRAMMLGDTPAPD----GYAGLVAERASRVPLQHITGVAHF 83

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++L +    F PRPETE +V   +      ++     RI+DLGTG+GA+  +L  E P
Sbjct: 84  RYLQLAVGPGVFIPRPETESVVQLVID----HVQGLPHPRIVDLGTGSGAIAGSLAHEVP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIES 177
             +   V+ S  A   A  N    G       +Q D       + G FDV+VSNPPYI +
Sbjct: 140 GAEVHAVEFSPFAHAWAAKNLAPLG----VHLVQGDLRNALPELNGTFDVVVSNPPYIPA 195

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             +     EV   DP  +L  GG DG+      A   +R L   G   +E    Q   + 
Sbjct: 196 EAIP-HEPEVALHDPPEALYGGGADGMELPTAAAASAARLLRPGGYFVMEHAEVQAAWIS 254

Query: 237 RIFESRK-LFLVNAFKDYGGNDRVL 260
            +         +    D  G +R  
Sbjct: 255 AMLARSGNWSSITTHLDLNGKERAT 279


>gi|108800850|ref|YP_641047.1| HemK family modification methylase [Mycobacterium sp. MCS]
 gi|119869990|ref|YP_939942.1| HemK family modification methylase [Mycobacterium sp. KMS]
 gi|126436448|ref|YP_001072139.1| HemK family modification methylase [Mycobacterium sp. JLS]
 gi|108771269|gb|ABG09991.1| modification methylase, HemK family [Mycobacterium sp. MCS]
 gi|119696079|gb|ABL93152.1| modification methylase, HemK family [Mycobacterium sp. KMS]
 gi|126236248|gb|ABN99648.1| modification methylase, HemK family [Mycobacterium sp. JLS]
          Length = 303

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 105/272 (38%), Gaps = 23/272 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        G    +++    + L         + +    K   +  + G   F  V++
Sbjct: 31  DAELLAAHAAGTDRGRLMF---ADLPPDFGIRFADLVSARAKRIPLQHLTGTAAFGPVQV 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           ++    F PRPETE L +  +  +LP     D   I+DL TG+GA+ LA+    P  + +
Sbjct: 88  SVGPGVFIPRPETEALFEWVVRQALP-----DEPLIVDLCTGSGALALAIATALPKARVI 142

Query: 126 GVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V+ S  AL  A+ N   +GV     D   +D    ++G  D++V+NPPYI       L 
Sbjct: 143 AVENSADALGYARRNLAGSGVELLDADVTAADLRPDLDGAVDLVVANPPYIPEG--AALD 200

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK- 243
            EV + DP  +L GG DG+     I     R L   G  +VE         V  F     
Sbjct: 201 PEVAEHDPPQALFGGPDGMVVIDAIVGLAQRWLRSGGRVAVEHDDTTSELTVAAFRRTGA 260

Query: 244 -----------LFLVNAFKDYGGNDRVLLFCR 264
                         V    D  G  R +   R
Sbjct: 261 VFEDAALGDAVFDDVTTHTDLTGRPRFVTARR 292


>gi|288576249|ref|ZP_05978460.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria mucosa ATCC 25996]
 gi|288565901|gb|EFC87461.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria mucosa ATCC 25996]
          Length = 301

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   + R   +H     +      
Sbjct: 38  NAHDEAAYLILHTLNLPLDTLEPYLDAKLLQSEKEEVLAVLERRAVEHIPAAYLTHQAWQ 97

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +    +      PR     L+  +L   +   E   V R LDL TG+G + + +    P
Sbjct: 98  GDFDFYVDERVIVPRSFIYELLGDSLTPWIEHPEL--VHRALDLCTGSGCLAVQMAHHYP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD+S  ALE+A  N    G+ ER + + +D F  +EG +D+IVSNPPY+++  V
Sbjct: 156 AAEIDAVDLSLDALEVAAINVEDYGLEERINLIHTDLFEGLEGAYDLIVSNPPYVDAESV 215

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  E    +P ++L  G DGL   R I    +++LN  G+  VEIG+N +  +   + 
Sbjct: 216 DMLPDEYL-HEPELALGSGEDGLDATRQILLHAAKYLNPKGVLLVEIGHN-RDVLEAAYP 273

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 +      GG+  V L  R
Sbjct: 274 ELPFTWLET---SGGDGFVFLLTR 294


>gi|297570957|ref|YP_003696731.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296931304|gb|ADH92112.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 281

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 16/263 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D       V G      I  P  ++           I R    E +  I+G   F  + L
Sbjct: 26  DVRLLAEHVWGS-----IPFPQDLITPEHAREFAATITRRASFEPVQHIMGKMWFRYLEL 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 F  RPET  +V  A   +L ++   + V ++DL TG+GA+ +A+  E P  +  
Sbjct: 81  ASRPGVFIVRPET-EMVAQAGLDALEKMTVENPV-VVDLCTGSGAIAIAIATEKPRTRVW 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDC 182
            V+    A  +A +N    G   R   +  D     + +E   D++++NPPY+       
Sbjct: 139 AVERDETAYALATANNERYG--NRVTIVHGDARTELAHLESAVDLLITNPPYVPRT--QE 194

Query: 183 LGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           L  +V   DP ++L  GG DGL   RT+       L   G+  +E G  Q   +V     
Sbjct: 195 LPADVHR-DPDLALYGGGDDGLDVPRTLVHRAHTLLRPGGVFVMEHGDEQGPALVAEAIE 253

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                    +D  G DR L   +
Sbjct: 254 TGFTHAYTGRDLTGRDRWLYAEK 276


>gi|224532130|ref|ZP_03672762.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116]
 gi|224511595|gb|EEF82001.1| putative protoporphyrinogen oxidase [Borrelia valaisiana VS116]
          Length = 273

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 9/248 (3%)

Query: 17  LSSHQVI-VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            +  ++I  +    L  R++    + I R  K   IH IL  ++F  +  +L+     PR
Sbjct: 29  KTRKELIFANIKKSLTKREKKLFFDQIDRIEKGTPIHYILQKKEFMGIEFSLNKHVLIPR 88

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +TE LV+ AL     +I++ D  +ILDL  G+G + L++   +   K +  DIS KAL+
Sbjct: 89  FDTECLVEEALI----QIQQNDFKKILDLCCGSGCIGLSIAYCTKK-KVILSDISIKALQ 143

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           IA  N     + +  + + S+    ++   D+I++NPPY+    ++         +P  +
Sbjct: 144 IASKNTKKLKLEKFVEIIHSNLLKCIKVKLDIIITNPPYLNKEELEI--KNKIKKEPTKA 201

Query: 196 LDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           L G G DGL+  R I       LN +GL  +E    Q   +      +    +    D  
Sbjct: 202 LLGFGKDGLNISRKILSQAKEKLNPNGLIIIESAPWQMKSLKNFAIKKGFTHLKTIYDLE 261

Query: 255 GNDRVLLF 262
              R L+ 
Sbjct: 262 KRARALVL 269


>gi|238785988|ref|ZP_04629950.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri
           ATCC 43970]
 gi|238713092|gb|EEQ05142.1| Uncharacterized adenine-specific methylase [Yersinia bercovieri
           ATCC 43970]
          Length = 314

 Score =  200 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F ++   +      PR     L+++    
Sbjct: 72  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDMEYYVDERVLVPRSPIGELINNRFDG 131

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +    K     ILD+ TG+G + +A     P  +   VDIS   L + + N   + +  
Sbjct: 132 LIRHQPK----HILDMCTGSGCIAIACAYAFPEAEVDAVDISNDVLAVTEHNIEQHSMEH 187

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 188 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 246

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  V ++  +       +    D  G D V +  +
Sbjct: 247 RILACAPDFLQDDGVLICEVG-NSMVHLMDQYPDVPFTWLEF--D-NGGDGVFMLTK 299


>gi|172060980|ref|YP_001808632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ambifaria MC40-6]
 gi|171993497|gb|ACB64416.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MC40-6]
          Length = 302

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 110/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A+ N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVARINVSDYGLDDRITLHRGDLYAPLPAFRAEPDARYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     + L+ DG+  VEIG N++ 
Sbjct: 210 YVNATSMAALPPEYR-HEPEMALAGGEDGMDIVRRIISEAHKWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDTVFLIQ 294


>gi|218768677|ref|YP_002343189.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis Z2491]
 gi|18203133|sp|Q9JTA1|Y1912_NEIMA RecName: Full=Uncharacterized adenine-specific methylase NMA1912
 gi|121052685|emb|CAM09027.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|254669591|emb|CBA03601.1| putative adenine-specific methylase [Neisseria meningitidis
           alpha153]
 gi|325142818|gb|EGC65188.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis 961-5945]
 gi|325198754|gb|ADY94210.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis G2136]
          Length = 303

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIIPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|158312865|ref|YP_001505373.1| HemK family modification methylase [Frankia sp. EAN1pec]
 gi|158108270|gb|ABW10467.1| modification methylase, HemK family [Frankia sp. EAN1pec]
          Length = 334

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/281 (21%), Positives = 101/281 (35%), Gaps = 25/281 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+S  ++ +   + ++      L   + R      +  + G   F ++ +
Sbjct: 40  DAEQLAAHVLGVSRGRLALV--TRVEPAAAGELRALVERRASRVPLQHLTGLAGFRHLDI 97

Query: 66  TLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +    F PRPETE + + A+A    P          +DL  G+GA+ L++  E P  + 
Sbjct: 98  AVGPGVFIPRPETEWVAEWAIAALRSPDAVVAGRPICVDLCAGSGAIALSVADEVPNAEV 157

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQ-----------------SDWFSSVEGLFDV 167
             V++   AL   + N    G+  R                          + + G  DV
Sbjct: 158 HAVELEPAALGWLRRNVERTGLPVRVHQADVGIPRSPTDAGRPVAPVGTVLTDLAGRADV 217

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           ++SNPPY+       +  EV   DP  +L GG DGL   R +       L   GL  +E 
Sbjct: 218 VISNPPYLPDHERPRVEPEVGRHDPPAALWGGPDGLDGPRAVVAAAGGLLRPGGLLVMEH 277

Query: 228 GYNQKVDVVRIFESRKLF-----LVNAFKDYGGNDRVLLFC 263
                  V  +      +      +    D  G DR +   
Sbjct: 278 ADGHGQTVPALLAGEGWWAGSWSEIVDHPDLAGRDRFVTAR 318


>gi|167581464|ref|ZP_02374338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis TXDOH]
          Length = 307

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 16/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLTPSEIDAVLALIERRAAERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDDYGLDERIALHHGDLYAPLPQFKWIDSAQRYDVIITNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAESMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLKDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +V   F   +L  +       G+D V L 
Sbjct: 271 ANVEAAFGGLELVWLPT---SAGDDSVFLI 297


>gi|126667394|ref|ZP_01738366.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17]
 gi|126628150|gb|EAZ98775.1| N5-glutamine methyltransferase [Marinobacter sp. ELB17]
          Length = 300

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 6/227 (2%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +  D+ L   +R  +   I R ++ +  +  +LG   F  +   +      PR     L+
Sbjct: 57  LFLDARLVREERELILERIERRVEEQVPLAYLLGEAWFMGLPFNVDPRVLVPRSPLAELL 116

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L    P +    V RILDL TG+G + +A        +    DIS  AL +A SN  
Sbjct: 117 ENGLQ---PWLGDVYVERILDLCTGSGCIGIAAATVFDGAEVDLADISTDALAVADSNIA 173

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            + + ER  T+QSD FS++   +DVI+SNPPY+ +  +  +  E    +P + L  G DG
Sbjct: 174 MHQLGERVRTVQSDVFSNLNERYDVILSNPPYVNARDLAGMPAEF-GHEPVLGLAAGEDG 232

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           L     I  G +  L  +GL  VE+G +   ++   +    L  +  
Sbjct: 233 LEIAHRILAGAAERLTDNGLLIVEVGNSW-PELDAAYPQLPLTWLEF 278


>gi|325128697|gb|EGC51562.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis N1568]
          Length = 303

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIIPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|224825464|ref|ZP_03698569.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Lutiella nitroferrum 2002]
 gi|224602385|gb|EEG08563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Lutiella nitroferrum 2002]
          Length = 300

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L   ++    D+ L   +   + + I R  +       +      
Sbjct: 36  NAYDEAAYLVLATLKLPLDRLEPFLDAKLLPTEIQDVIDIIERRAEERIPAAYLTHEAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   LA  +   E   V R LDL TG+G + + +    P
Sbjct: 96  GEFSFYVDERVIVPRSFIFELLGEPLAPWIEHPEL--VHRALDLCTGSGCLAIQMAHHYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDIS  ALE+A  N    G+ +R   + +D F  +E  +D+I+SNPPY++   V
Sbjct: 154 DAQIDAVDISLDALEVASINVQRYGLEDRIQLVHTDLFQGLEEKYDLIISNPPYVDEESV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D L  E    +P ++L  G DGL   R I       L + G+  VEIG+N +  +   F 
Sbjct: 214 DDLPAEYL-HEPELALGSGRDGLDATREILRRAPEFLTEHGVLLVEIGHN-RDVLEAAFP 271

Query: 241 SRKLFLVNAFKDYGGNDRVLLF 262
                 +       G D  +  
Sbjct: 272 QLPFMWMET----SGGDGFVFL 289


>gi|78369416|ref|NP_001030385.1| hemK methyltransferase family member 1 [Bos taurus]
 gi|74354715|gb|AAI02829.1| HemK methyltransferase family member 1 [Bos taurus]
          Length = 321

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 68/271 (25%), Positives = 111/271 (40%), Gaps = 17/271 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L   Q   +       L+   +  ILG  
Sbjct: 52  EARESSEYIVAHVLG-AKTFQSLRPALRTQPLTPWQLQCIQELSSYRLQRMPVQYILGEW 110

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L         +       IL++G G+GA+ L+L
Sbjct: 111 DFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLILEVGCGSGAISLSL 170

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSV-EGLFDVI 168
           L   P  +   VD    A+ +   NA    + +R   +  D      W   +  G  D++
Sbjct: 171 LSRLPQSRVTAVDKGEAAICLTHENAQRLRLQDRIQIVPFDVTLVESWAHLLPWGPVDLV 230

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPY+    ++ L  E+  ++  ++LDGG +G+     I     + L   G   +E+ 
Sbjct: 231 VSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQLLKDSGSIFLEVD 290

Query: 229 YNQKVDVVRIFESR---KLFLVNAFKDYGGN 256
                 V    +S+    L LV   +D+ G 
Sbjct: 291 PRHPELVGSWLQSQPDLPLNLVAVRRDFRGR 321


>gi|296128916|ref|YP_003636166.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas flavigena DSM 20109]
 gi|296020731|gb|ADG73967.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Cellulomonas flavigena DSM 20109]
          Length = 304

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 9/253 (3%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              + ++ P   L +         + R    E +  I+G   F  V L +    F PRPE
Sbjct: 44  PRVEPVMAP--PLPEGFAAQYAELVERRRSREPLQHIVGHTVFRYVTLRVEPGVFVPRPE 101

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE +   A+  +     +     ++DL TGTGA+ +++  E    + V VD+S +A+ +A
Sbjct: 102 TETVAQLAVDEAAAVAARGGSPLVVDLCTGTGAIAVSVDTEVAASRVVAVDLSDEAVGLA 161

Query: 138 KSN----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + N    A       + D       + ++G  DV+VSNPPYI    V  L  EVRD DP 
Sbjct: 162 RHNAGAVASRALRVVQGDVRDPALLAELDGTVDVVVSNPPYIPPDAVP-LDPEVRDHDPD 220

Query: 194 ISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFK 251
           ++L  GG DGL   R +    +R L   GL  +E    Q          +     V    
Sbjct: 221 LALYGGGSDGLDVPRAVIAAAARLLAPGGLLVMEHAEVQDAQARAAAAATGAFEDVRTVP 280

Query: 252 DYGGNDRVLLFCR 264
           D  G  R L+  R
Sbjct: 281 DLTGRPRTLVARR 293


>gi|15677504|ref|NP_274660.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria meningitidis MC58]
 gi|18203146|sp|Q9JYC0|Y1655_NEIMB RecName: Full=Uncharacterized adenine-specific methylase NMB1655
 gi|7226907|gb|AAF42004.1| putative adenine specific methylase [Neisseria meningitidis MC58]
 gi|308389776|gb|ADO32096.1| hypothetical protein NMBB_1897 [Neisseria meningitidis alpha710]
 gi|316985002|gb|EFV63956.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis H44/76]
 gi|319410908|emb|CBY91303.1| putative adenine-specific methylase [Neisseria meningitidis WUE
           2594]
 gi|325136695|gb|EGC59295.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M0579]
 gi|325140791|gb|EGC63302.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis CU385]
 gi|325199751|gb|ADY95206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis H44/76]
 gi|325201686|gb|ADY97140.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240149]
 gi|325204616|gb|ADZ00070.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M01-240355]
 gi|325208578|gb|ADZ04030.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis NZ-05/33]
          Length = 303

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIIPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|92114585|ref|YP_574513.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Chromohalobacter salexigens DSM 3043]
 gi|91797675|gb|ABE59814.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 317

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 100/227 (44%), Gaps = 7/227 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D+ L   +R  +   + + +     +  +LG   F      +      PR     L++  
Sbjct: 75  DARLLPLERQRVVALVRQRIEARTPLPYLLGEAFFAGHLFDVDERVLIPRSPIAELIEDG 134

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A      ++    R+LDL  G+G + +A     P  +   VDIS  AL +AK+N V + 
Sbjct: 135 FA---AWFDQWPPARVLDLCAGSGCIGIATALYLPTAEVDLVDISPDALAVAKANIVRHD 191

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V  R   + SD F+ V G  +DVIVSNPPY+++  +  +  E R  +P ++L  G DGL 
Sbjct: 192 VGHRVRAVTSDLFAGVAGQRYDVIVSNPPYVDARDLAGMPAEFR-HEPTLALAAGDDGLD 250

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             R +      HL  DG+  VE+G N    +   F       +   +
Sbjct: 251 IVRRMLREAREHLTDDGVLIVEVG-NSARHLDAAFPEVPFLWLEFER 296


>gi|261885151|ref|ZP_06009190.1| bifunctional methyltransferase [Campylobacter fetus subsp.
           venerealis str. Azul-94]
          Length = 261

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 62/258 (24%), Positives = 100/258 (38%), Gaps = 15/258 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           + S +          + +  +  LD    F +   + R    E +  I    DF +    
Sbjct: 19  AFSLMGFHLKKDREWIFLHKEDKLDFVDEFLI--LLDRYKNGEPLQYITRSCDFLDYEFE 76

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
                  PR ETE+LV    + +       D + I ++G G+G + ++L +         
Sbjct: 77  GRRGVLVPRYETEILVHRVASIAT----HLDNISICEIGIGSGVISISLAQMLKNCIFTA 132

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  A+  A+++    GV  + +   + +   VEG FD+IVSNPPYI       L   
Sbjct: 133 ADISEDAIRYARNHISRFGV--QIELFNTSFLDGVEGDFDIIVSNPPYIAKDYK--LDKW 188

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V   +P  +L GG  G    + I +              E+GY+QK  +    E      
Sbjct: 189 VMS-EPSQALFGGEKGDEILKKIVNLAKDRTK---FLVCEMGYDQKASLSNELEKAGFKF 244

Query: 247 VNAFKDYGGNDRVLLFCR 264
              +KD  G DR  +  R
Sbjct: 245 -EFYKDLAGFDRGFVAYR 261


>gi|170703465|ref|ZP_02894232.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria IOP40-10]
 gi|170131622|gb|EDT00183.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria IOP40-10]
          Length = 302

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A+ N    G+ ER    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVARINVSDYGLDERITLHRGDLYAPLPAFRAEPDARYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     + L+ DG+  VEIG N++ 
Sbjct: 210 YVNATSMAALPPEYR-HEPEMALAGGEDGMDIVRRIISEAHKWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDTVFLIQ 294


>gi|27382585|ref|NP_774114.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium japonicum USDA 110]
 gi|27355757|dbj|BAC52739.1| hypothetical adenine-specific methylase [Bradyrhizobium japonicum
           USDA 110]
          Length = 319

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 104/254 (40%), Gaps = 8/254 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +C    L   Q      + +   +   L + I + +   +    ++     
Sbjct: 52  DPVAEAAFLVCEALHLHPDQFEAFAHARVTAAEGKTLLDLIHQRVTTRKPAAYLVNKIYM 111

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALL 116
             +   +      PR     L+DS                 V R+LDL TG+G + +   
Sbjct: 112 RGLPFYVDERVIVPRSYIGELLDSHFGGDGEAGSLIDHPTAVERVLDLCTGSGCLAILAA 171

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
              P      VDIS  ALE+A  N   +G+ ER    + D F+ + +  +D+I++NPPY+
Sbjct: 172 YHFPNATVDAVDISKGALEVAARNVGEHGLDERVTLHRGDLFAPLGDNRYDLIITNPPYV 231

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           ++  +  L  E R  +P+++ DGG+DGL   R I      HL  DG    EIG   +  V
Sbjct: 232 DAEGMAALPPECRA-EPKLAFDGGVDGLDVVRRILRDAPEHLTPDGGLICEIGRG-RELV 289

Query: 236 VRIFESRKLFLVNA 249
              F    L  ++ 
Sbjct: 290 DEAFPELPLLWLDT 303


>gi|213964542|ref|ZP_03392742.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium amycolatum SK46]
 gi|213952735|gb|EEB64117.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Corynebacterium amycolatum SK46]
          Length = 314

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 110/260 (42%), Gaps = 18/260 (6%)

Query: 19  SHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              +I   D    D   R  L   +VR +  E +  ILG     ++ L +    F PRPE
Sbjct: 58  PADIIFRGDEPYTDEAGRKHLAEMLVRRVAREPLQHILGTAPMMSLELQVGPGVFVPRPE 117

Query: 78  TELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           TELL   A+  +   +    V  +I+DL TG+GA+ LA+    P    V V++S +A   
Sbjct: 118 TELLAQWAIDRARELVASGVVKPKIVDLCTGSGALALAIADAVPEADVVAVELSERARAW 177

Query: 137 AKSNAVTNGVSERFDTLQSDW-----------FSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           A  N  T G   R   +  D             +   G  D++VSNPPY+       +  
Sbjct: 178 AAKNIETYG-DGRVRLIAGDVTDDQLIDDGGELADWVGETDIVVSNPPYVPEDT--EVTP 234

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KL 244
           EVR  DP  ++ GG DGL   R + + V   +   G+  +E   +   DV  + +     
Sbjct: 235 EVRA-DPHSAVFGGDDGLDVIRPMMNLVDALVRSGGVIGIEHDDSSGDDVSSLLKDTWDY 293

Query: 245 FLVNAFKDYGGNDRVLLFCR 264
             V   +D+ G DR  +  +
Sbjct: 294 ADVEVRRDFAGRDRFTVGRK 313


>gi|134296042|ref|YP_001119777.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia vietnamiensis G4]
 gi|134139199|gb|ABO54942.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 302

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRAADRVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
                 VD+S  ALE+A+ N    G+ +R    + D ++ +       +G +DVI++NPP
Sbjct: 150 NADIDAVDLSDDALEVARINVRDYGLEDRITLHRGDLYAPLPAFRAEPDGRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVGEAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +V   F       +       G+D V L  
Sbjct: 268 NVEAAF---GGLELTWLPTSAGDDAVFLIQ 294


>gi|120611152|ref|YP_970830.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acidovorax citrulli AAC00-1]
 gi|120589616|gb|ABM33056.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Acidovorax citrulli AAC00-1]
          Length = 309

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 106/263 (40%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   +    GL     + D  SV  DRQ         R    +    +       
Sbjct: 43  NAHDEAAWLVLWRLGLPLDTPLEDAASVAPDRQAQVAELIEQRIATRKPAAYLTREAWLQ 102

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V   +      PR     L+      S+          +LDL TG G++ +      P 
Sbjct: 103 GVPFYVDERAIVPRSFIAELL---ADGSIDGFLGEHTRDVLDLCTGNGSLAVLAAMAYPD 159

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  G D+S  AL++A+ N   +G+  R     SD  S+V G +D+I+ NPPY+ +  + 
Sbjct: 160 VRVTGADLSPDALDVARINVERHGLEGRVALALSDGLSAVPGPWDLILCNPPYVNAASMA 219

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++L GG DG+   R +       L +DG+  +EIG N++      F  
Sbjct: 220 ALPQEYRA-EPELALAGGADGMDFVRRLLADAPAALREDGVLILEIG-NERAHFEAAFPH 277

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
              F +       G D+VLL  R
Sbjct: 278 LPAFWLET---SAGEDQVLLLTR 297


>gi|325860412|ref|ZP_08173524.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A]
 gi|325482070|gb|EGC85091.1| methyltransferase, HemK family [Prevotella denticola CRIS 18C-A]
          Length = 275

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 10/265 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L    G+S   +     + L   +   L   + R  + E +  +LG+  F      +
Sbjct: 12  RLVLEVQFGISLTDIYTGKVNELSRDEADGLEKIMSRLERAEPVQYVLGYAMFCGRPFHV 71

Query: 68  SSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +S    PRPETE+L   ++         ++    +++LD+GTG+G + ++L  +      
Sbjct: 72  ASGVLIPRPETEVLCRWIEEDYNRPYCALQPPVPLQVLDVGTGSGCIAVSLALDLYNSAL 131

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIV 180
              D+S  AL IA+ N   +    R +    D        +E  +D+IVSNPPYI +   
Sbjct: 132 TAWDVSGDALLIARENI--HRWDARVELKMEDALHPSPAAMEQQWDIIVSNPPYICNRER 189

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V +++P  +L     D L  YR +A+   + L+ +G+   E        V  + 
Sbjct: 190 AAMAANVLEYEPETALFVPDDDPLQFYRAVAEYGVQTLSDEGVLYFETNPLYINKVKEML 249

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      V   +D  G  R     R
Sbjct: 250 DESGYKQVMLREDQFGKLRFTKALR 274


>gi|194477095|ref|YP_002049274.1| modification methylase, HemK family protein [Paulinella
           chromatophora]
 gi|171192102|gb|ACB43064.1| modification methylase, HemK family protein [Paulinella
           chromatophora]
          Length = 317

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 76/272 (27%), Positives = 122/272 (44%), Gaps = 11/272 (4%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLD-DRQRFFLTNAIVRS-LKHESIHRILGWRDFY 61
           L D    L  +  ++ +QV++    V    R    L+       LK   +  ++G   + 
Sbjct: 45  LVDLEWLLNILCDINWNQVLLSQLKVFSLSRPLKDLSKIWQCHCLKKIPLQYLVGICPWR 104

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------DVVRILDLGTGTGAVCLAL 115
           ++ L   S    PR ETELLVD AL        K          R  DLGTG+GA+ +AL
Sbjct: 105 DLYLKSDSGVLIPRQETELLVDLALHCVSHSRHKLFVGGELPTYRWADLGTGSGAIAVAL 164

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
            +  P + G   D + +A   ++ N      +++    Q DWF       G F++I++NP
Sbjct: 165 SRALPSWLGHATDYTNEAFYQSERNIKQLAFNKKVVLTQGDWFLPLHPWWGQFNLILANP 224

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI S +V+ L   + + +PR+SLDGG DGL   R +     R L   G   +E  ++Q 
Sbjct: 225 PYIPSKVVNSLETNILNNEPRLSLDGGHDGLKSIRILVKEAPRILITGGWILIEHHHDQN 284

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             ++++     L  V   +D  G  R  +  +
Sbjct: 285 ACIMQLMIKAGLSNVQWARDLDGKLRFAIAQK 316


>gi|325134736|gb|EGC57374.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M13399]
 gi|325205626|gb|ADZ01079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria meningitidis M04-240196]
          Length = 303

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAAYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|253996070|ref|YP_003048134.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylotenera mobilis JLW8]
 gi|253982749|gb|ACT47607.1| modification methylase, HemK family [Methylotenera mobilis JLW8]
          Length = 303

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 10/262 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++   + R   L    +    D+ L + +R  L + + + + KH     +L        +
Sbjct: 41  EAVWLIMRALHLPLDTLDNFLDAKLTNSERSKLASFVEQRITKHTPTAYLLKEAWLQGFK 100

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFK 123
             +      PR     L+        P IE  +++    D+ TG+G + + L    P   
Sbjct: 101 FYVDERVLIPRSFIAELL--VNDGLAPWIEFPELINNAADICTGSGCLGVLLADAYPDAA 158

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              +DIS  A+++   N    G+ +R   ++SD FS ++G  +D+I+SNPPY+++  +  
Sbjct: 159 VDVIDISQDAIDVCNININAYGLQDRITAIKSDMFSQLKGKQYDLIISNPPYVDAPSMAV 218

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E R+ +P+++L  G+ GL H  TI    + +L +DG+  VEIG+N +  V+  +   
Sbjct: 219 LPAEYRN-EPQLALGSGVAGLDHTHTILHEAANYLTEDGVLVVEIGHN-RDAVLDAYPDL 276

Query: 243 KLFLVNAFKDYGGNDRVLLFCR 264
               +       G+  V L  R
Sbjct: 277 PFTWLEV---SSGDAFVFLLTR 295


>gi|319941614|ref|ZP_08015938.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis
           3_1_45B]
 gi|319804844|gb|EFW01698.1| site-specific DNA-methyltransferase [Sutterella wadsworthensis
           3_1_45B]
          Length = 310

 Score =  199 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFY 61
           AL D+   +CR   L      +  D+ L   +   + + I R +  +     +L      
Sbjct: 43  ALEDASFLICRALKLPFENFDMFLDAALTHNELVRIVHLIDRRVHDKTPTAYLLKEAWLT 102

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R  +      PR     L++  LA      +   V  +LDL TG+G + +      P 
Sbjct: 103 EHRFYIDERALIPRSYIAELLEEDLAPW--AADPEAVQSVLDLCTGSGCLAILAQGAFPN 160

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            K  G DIS  ALE+AK N     + E  + +QSD F +++G  FD+I+SNPPY+ +  +
Sbjct: 161 AKVTGSDISQAALEVAKINRRDYDMEETLELVQSDLFENLQGRRFDIIISNPPYVTTDAM 220

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E R  +P ++L  G DG+   R I    + HL ++G   VE+G +    V   F 
Sbjct: 221 ERLPSEYR-HEPALALAAGADGMDVVRRILAEAADHLTEEGFIVVEVG-DGLEAVEAAFP 278

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
              +  ++     GG+D+V L  R
Sbjct: 279 GLPITWLSV---SGGDDQVFLAQR 299


>gi|217967195|ref|YP_002352701.1| modification methylase, HemK family [Dictyoglomus turgidum DSM
           6724]
 gi|217336294|gb|ACK42087.1| modification methylase, HemK family [Dictyoglomus turgidum DSM
           6724]
          Length = 282

 Score =  199 bits (508), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 22/267 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   +  V       +       L D +   L   +    K   ++ I+  + FY+
Sbjct: 24  AWLEAELLVAFVLNKDRAFIYTI--DFLTDEEVEKLKKLLDLRKKGIPLNYIIEKKQFYD 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PR ETE+L++ A    L    K    +I+++G G+G + + L KE    
Sbjct: 82  IELFVERGVLIPRSETEILIEVAKDTIL----KEGYKKIVEIGVGSGNISITLAKEFKDI 137

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVI 179
           K    DIS +A+++A+ NA  + VS++ +         +      F++I+SNPPYI S  
Sbjct: 138 KIYACDISPEAIKVARFNAKKHKVSDKIEFFFGFLLYPMVHRNVDFELIISNPPYIASWE 197

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL---CSVEIGYNQKVDVV 236
              L  EV+  +P  +L GG DG   YR +       L K G      +EI       V+
Sbjct: 198 FPFLQKEVKK-EPWKALYGGWDGCEFYRKLF----TLLKKRGKNFTAILEISPYIYHKVL 252

Query: 237 RIFESRKLFL---VNAFKDYGGNDRVL 260
            I ++   F    + +F+DY G++RV+
Sbjct: 253 NILKN--FFDSVIIESFRDYLGHERVI 277


>gi|296315211|ref|ZP_06865152.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria polysaccharea ATCC 43768]
 gi|296837844|gb|EFH21782.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria polysaccharea ATCC 43768]
          Length = 303

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTRQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VELLPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|294786651|ref|ZP_06751905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parascardovia denticolens F0305]
 gi|315226254|ref|ZP_07868042.1| methyltransferase [Parascardovia denticolens DSM 10105]
 gi|294485484|gb|EFG33118.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Parascardovia denticolens F0305]
 gi|315120386|gb|EFT83518.1| methyltransferase [Parascardovia denticolens DSM 10105]
          Length = 327

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/299 (23%), Positives = 114/299 (38%), Gaps = 41/299 (13%)

Query: 2   QALRDSHSFLCRVTGLSSHQ-----------------------VIVDPDSVLDDRQRFF- 37
           QA  D+   +    G+S                          +    +  L  ++ F  
Sbjct: 27  QADNDAAILIAYSFGVSKSDVTLASIMGGSLGDLKSAGHCFVALPAGSEGSLQGKRAFLQ 86

Query: 38  -LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R    E +  I+G   F  + + +    F PR ETE LV   L +     +  
Sbjct: 87  DLQERVGRRAAREPLQYIIGKAPFRYLTVAVGPGVFIPRQETETLVQIGLDWVDE--QAI 144

Query: 97  DVVRILDLGTGTGAVCLALLKES--PFFKGVGVDISCKALEIAKSNAV-----TNGVSER 149
           D   ILDL  G+G V LA + E      +   V+I  +A+   + N          +  R
Sbjct: 145 DAPVILDLCAGSGVVGLAAVTELQARKAQVYAVEIDDQAIAWTRKNRDQILWSRPELKSR 204

Query: 150 FDTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGL 203
           +  +Q+D       + ++   D++++NPPY+    +     EVRD+DP ++L GG  DGL
Sbjct: 205 YQLVQADASSPQTLAQLDDQADLVLTNPPYVPLTQIPQ-QPEVRDYDPDVALYGGSDDGL 263

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
                I    +  L   GL  +E   +Q   +V    S      +   D  G DR L+ 
Sbjct: 264 VIPEKIVRRAAAFLRPGGLLVMEHDSSQSHALVSFATSVGFSQAHTAPDLTGRDRFLVA 322


>gi|325674111|ref|ZP_08153801.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|325555376|gb|EGD25048.1| protein-(glutamine-N5) methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 268

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 95/222 (42%), Gaps = 6/222 (2%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +  +   L   I R      +  +LGW +F   R+ +    F PR  TELLV  A A   
Sbjct: 38  EAARAGDLARMIERRSAGVPLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAALV- 96

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     ++DL  G+GAV +A+  +SP  +    D+   A+  A+ N    G     
Sbjct: 97  -----DQGDVVVDLCCGSGAVGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHE 151

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             L       + G  DV+V+N PY+ S  +  +  E RD +PR +LDGG DGL   R +A
Sbjct: 152 GDLFDALPEELRGRVDVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVA 211

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +   R L+  G   VE   +Q    V IF    L       D
Sbjct: 212 EAAPRWLSPGGRLLVETSIHQASSSVGIFTRAGLLAQIVHSD 253


>gi|107028787|ref|YP_625882.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116690054|ref|YP_835677.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|170733388|ref|YP_001765335.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia MC0-3]
 gi|105897951|gb|ABF80909.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116648143|gb|ABK08784.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia cenocepacia HI2424]
 gi|169816630|gb|ACA91213.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia cenocepacia MC0-3]
          Length = 302

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A+ N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDAVFLIQ 294


>gi|325268455|ref|ZP_08135085.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis
           DSM 16608]
 gi|324988983|gb|EGC20936.1| protein-(glutamine-N5) methyltransferase [Prevotella multiformis
           DSM 16608]
          Length = 287

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 10/265 (3%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L   +G+S   +     + L   +   L   + R  + E +  +LG+  F      +
Sbjct: 24  RLVLEVQSGISLTDIYTGKVNELSRDEADGLEKIMSRLERAEPVQYVLGYAMFCGRPFHV 83

Query: 68  SSDTFEPRPETELL---VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +S    PRPETE+L   ++         ++    +++LD+GTG+G V ++L  +      
Sbjct: 84  ASGVLIPRPETEVLCRWIEEDYNRPYCALQPPVPLQVLDVGTGSGCVAVSLALDLYNSAL 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIV 180
              D+S  AL IA+ N   +    R +    D        +E  +D+IVSNPPYI +   
Sbjct: 144 TAWDVSGDALLIARENI--HRWDARVELKMEDALHPSPAAMERQWDIIVSNPPYICNRER 201

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
             +   V +++P  +L     D L  YR IA+   + L+ +G+   E        V  + 
Sbjct: 202 AAMAANVLEYEPETALFVPDDDPLQFYRAIAEYGVQTLSDEGVLYFETNPLYINKVKEML 261

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      V   +D  G  R     R
Sbjct: 262 DESGYKQVMLREDQFGKLRFTKALR 286


>gi|261868313|ref|YP_003256235.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413645|gb|ACX83016.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 316

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 8/249 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDF 60
            A  ++H  +     L         ++ L   ++  L   + +R  K   I  ++    F
Sbjct: 50  NAWDEAHQLVLSCLHLPPDFPAELYNARLTVAEKLELIRLVMIRLEKRLPIAYLIHSAWF 109

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +      PR     L+    A  LP+  K    RILD+ TG+G + +A  ++ P
Sbjct: 110 CGLEFYVDERVIIPRSPIGALIQDGFAGLLPKAPK----RILDMCTGSGCIAIACAEQFP 165

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVI 179
                 VD+S  AL +A+ N     +S R   +QSD FS  +   +D+IV+NPPY++   
Sbjct: 166 EADVDAVDLSLDALNVAEINIERYNLSRRVFPIQSDLFSQLLAEQYDLIVTNPPYVDLDD 225

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              +  E   ++P ++L  G DGL+  + I    + +L  DG+   E+G N  V ++  F
Sbjct: 226 RSDMPEEF-HYEPEMALGSGDDGLTITKQILRQAANYLTDDGVLVCEVG-NSMVHLIEQF 283

Query: 240 ESRKLFLVN 248
            S     + 
Sbjct: 284 PSVPFNWLE 292


>gi|194366630|ref|YP_002029240.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Stenotrophomonas maltophilia R551-3]
 gi|194349434|gb|ACF52557.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas maltophilia R551-3]
          Length = 309

 Score =  199 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLQEEKVRVLELFQRRIDERMPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +          PR     L++       P +  RDV R LDL TG+G + +A+    P
Sbjct: 96  AGLSFKSDKRALVPRSPIAELIECGFE---PWLAGRDVSRALDLCTGSGCIAIAMGHYYP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            ++  GVD+S  AL +A  N      +     L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 NWEVDGVDLSDDALSLATENKERLQ-AHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I      HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPDMGLRAGDDGLDLVLKILRDAPLHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 270 PEVDFAWIEF 279


>gi|254497889|ref|ZP_05110654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella drancourtii LLAP12]
 gi|254352887|gb|EET11657.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Legionella drancourtii LLAP12]
          Length = 305

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 13/252 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSV---LDDRQRFFLTNAIVRSL-KHESIHRILGW 57
            A  D  S + R   L      +DP  +   L   ++  L   + + + +   +  ++  
Sbjct: 39  NAWDDMRSLILRSLSLP---YDLDPHLLNGRLTPSEKKHLCQQLEKRINQRVPVPYLIKE 95

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F ++   +      PR     L+        P I+  +V R+LDL TG+G + +A   
Sbjct: 96  AFFCDLPFYVDERVLIPRSPIAELI---KEQFSPWIDAGNVHRVLDLCTGSGCIAIACCY 152

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P      VDIS +AL +A  N    GV ++   + SD F++V    +D+IVSNPPY+ 
Sbjct: 153 AFPDAHVDAVDISSEALAVAAINREELGVEDQLTLIDSDCFANVPKVRYDLIVSNPPYVG 212

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +  L  E R  +P ++L+   +GL+   TI      +L++ G+  VE+G N +  + 
Sbjct: 213 KEEMQTLPDEFR-HEPVLALETSNNGLAIVETILKEAHAYLSEQGILVVEVG-NSEEALS 270

Query: 237 RIFESRKLFLVN 248
             +       + 
Sbjct: 271 DAYPHVPFTWLE 282


>gi|226363566|ref|YP_002781348.1| methyltransferase [Rhodococcus opacus B4]
 gi|226242055|dbj|BAH52403.1| putative methyltransferase [Rhodococcus opacus B4]
          Length = 260

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 7/209 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L + + R +    +  +LGW +F  +R+ +    F PR  T  LV+ A A + P     
Sbjct: 41  ELASMLDRRVAGVPLEHVLGWAEFCGLRIEVDPRVFVPRRRTAFLVEQAAALACPH---- 96

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++DL  G+GAV  AL       +   VDI   A+  A+ N     +    D L + 
Sbjct: 97  --AVVVDLCCGSGAVGAALADTLDGIELYAVDIDPAAVRCARRNLAEPALVFEGD-LYAP 153

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S++ G  D++V+N PY+ +  +  +  E R  +PR+SLDGG DGL   R +  G    
Sbjct: 154 LPSALRGRIDILVANAPYVPTEAIRLMPPEARFHEPRVSLDGGADGLDIQRRVTAGARDW 213

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L   G   +E   +Q       FE   L 
Sbjct: 214 LAPGGHLLIETSESQAPRTAGAFEEAGLT 242


>gi|171319301|ref|ZP_02908414.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MEX-5]
 gi|171095483|gb|EDT40450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia ambifaria MEX-5]
          Length = 302

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S  ALE+A+ N    G+ ER    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDNALEVARINVRDYGLDERITLHRGDLYAPLPAFRAEPDARYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     + L+ DG+  VEIG N++ 
Sbjct: 210 YVNATSMAALPPEYR-HEPEMALAGGEDGMDIVRRIISEAHKWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDTVFLIQ 294


>gi|254247871|ref|ZP_04941192.1| Modification methylase HemK [Burkholderia cenocepacia PC184]
 gi|124872647|gb|EAY64363.1| Modification methylase HemK [Burkholderia cenocepacia PC184]
          Length = 302

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFMDARLLPDEIAAVLAVIERRAADRVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A+ N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVAEINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDAVFLIQ 294


>gi|283956131|ref|ZP_06373618.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792451|gb|EFC31233.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 271

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D +        I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIEIDHK---PYFELIRRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K    +IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNKILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 245 IVDFFKDEQGYNRAFIA 261


>gi|323356869|ref|YP_004223265.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
 gi|323273240|dbj|BAJ73385.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
          Length = 297

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 64/267 (23%), Positives = 96/267 (35%), Gaps = 7/267 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVD--PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
               D+   +  V   S   V         +       L     R    E +  + G   
Sbjct: 33  DPRVDAELLVGHVLRTSRGGVQAAAIRGDRMPPAAAADLLPLADRRCAREPLQHLTGVAP 92

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +    F PRPETE++    LA              +DLGTG+GA+ LA+  E 
Sbjct: 93  FRSLELAVGPGVFVPRPETEMVAQ--LAIDALGAAAAPAPIAVDLGTGSGAIALAMATEV 150

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           P  +    + S  A    K N    G +         +D F  ++G   V+ SNPPY+  
Sbjct: 151 PHARVFAAENSVDAFIWTKENVARVGATNVTLAFVDLADAFPELDGTVSVVASNPPYVPD 210

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +     EVR +DP  +L GG DGL   R ++    R  +      +E G  Q   +  
Sbjct: 211 DAIPR-DPEVRLYDPPAALYGGPDGLDAVRHLSRVGLRLGHPGATLVIEHGEWQGAAIRD 269

Query: 238 IFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +          D    DR     R
Sbjct: 270 LLTADGWRAAATHPDLTSRDRATTAVR 296


>gi|299134251|ref|ZP_07027444.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Afipia sp. 1NLS2]
 gi|298590998|gb|EFI51200.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Afipia sp. 1NLS2]
          Length = 325

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 7/253 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L+  Q      + +   +   L + I + ++  + +  ++     
Sbjct: 59  DPVAEAAFLVTEALHLAPEQFETFAQARVTKAEAAKLLSLIGQRVRTRKPVAYLVNKIYM 118

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI---EKRDVVRILDLGTGTGAVCLALLK 117
             +   +      PR     L+DS            +   V R+LDL TG+G + +   +
Sbjct: 119 RGLPFYVDERVIVPRSFIGELLDSHFGGDSEMPLIDDPGSVGRVLDLCTGSGCLAILAAQ 178

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
                    VD+S  AL +A  N    G+ +R    + + F+ +    +D+I+SNPPY++
Sbjct: 179 TFFNATLDAVDLSKDALAVAAKNVADYGLEDRISLHKGNLFAPLGNERYDLIISNPPYVD 238

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  E R  +P+++ DGG DG+   R I +  + HL  +G    E+G   +  V 
Sbjct: 239 AEGMASLPPECR-HEPKLAFDGGADGIDIVRRIINEAAAHLTPNGGLLCEVG-RCREAVE 296

Query: 237 RIFESRKLFLVNA 249
             F +  L  ++ 
Sbjct: 297 DAFPTLPLLWLDT 309


>gi|296474810|gb|DAA16925.1| HemK methyltransferase family member 1 [Bos taurus]
          Length = 321

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD---SVLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     + P      L   Q   +       L+   +  ILG  
Sbjct: 52  EARESSEYIVAHVLG-AKTFQSLRPALRTQPLTPWQLQCIQELSSYRLQRMPVQYILGEW 110

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLAL 115
           DF  + L ++   F PRPETE LV+  L         +       IL++G G+GA+ L+L
Sbjct: 111 DFQGLNLKMAPPVFIPRPETEELVEWVLEEVTQGPRVVGAEGGPLILEVGCGSGAISLSL 170

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSV-EGLFDVI 168
           L   P  +   VD    A+ +   NA    +  R   +  D      W   +  G  D++
Sbjct: 171 LSRLPQSRVTAVDKGEAAICLTHENAQRLRLQARIQIVTFDVTLVESWAHLLPWGPVDLV 230

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPPY+    ++ L  E+  ++  ++LDGG +G+     I     + L   G   +E+ 
Sbjct: 231 VSNPPYVFHRDMENLAPEILRYEDPVALDGGEEGMDIITHILALAPQLLKDSGSIFLEVD 290

Query: 229 YNQKVDVVRIFESR---KLFLVNAFKDYGGN 256
                 V    +S+    L LV   +D+ G 
Sbjct: 291 PRHPELVGSWLQSQPDLPLNLVAVRRDFRGR 321


>gi|283953911|ref|ZP_06371440.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794516|gb|EFC33256.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 414]
          Length = 269

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D    F L   I R    E    I    DF+ ++ 
Sbjct: 20  EAAFILCEYLQKDKAWLFLNQDIKIDHESYFQL---IKRFKSGEPFEYIFEKVDFWGLKF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K    +IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNKILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    +    + F  +E  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLINFKLCN-FKQIEENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQR-EPKEALFGGEKGYEILEEIIHFSID--KKVKFLACEFGYDQKEVLEKILHQNNFT 245

Query: 246 LVNAFKDYGGNDRVLLF 262
             + FKD  G +R  + 
Sbjct: 246 -ADFFKDEQGYNRAFIA 261


>gi|312141078|ref|YP_004008414.1| sam dependent methyltransferase [Rhodococcus equi 103S]
 gi|311890417|emb|CBH49735.1| SAM dependent methyltransferase [Rhodococcus equi 103S]
          Length = 268

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 6/222 (2%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           +  +   L   + R      +  +LGW +F   R+ +    F PR  TELLV  A A   
Sbjct: 38  EAARAGDLARMVERRSAGVPLEHVLGWVEFCGRRIDIEQGVFVPRRRTELLVQEAAALV- 96

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     ++DL  G+GA+ +A+  +SP  +    D+   A+  A+ N    G     
Sbjct: 97  -----DQGDVVVDLCCGSGALGVAIAADSPGVELHSADLDPVAVRCARRNVEPVGGHVHE 151

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             L       + G  DV+V+N PY+ S  +  +  E RD +PR +LDGG DGL   R +A
Sbjct: 152 GDLFDALPEELRGRVDVVVANVPYVPSDAIALMPPEARDHEPRAALDGGPDGLDVQRAVA 211

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +   R L+  G   VE   +Q    V IF    L       D
Sbjct: 212 EAAPRWLSPGGRLLVETSIHQASSSVGIFTRAGLLAQIVHSD 253


>gi|116075869|ref|ZP_01473128.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916]
 gi|116067184|gb|EAU72939.1| hypothetical protein RS9916_40426 [Synechococcus sp. RS9916]
          Length = 299

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 128/262 (48%), Gaps = 11/262 (4%)

Query: 6   DSHSFLCRVTGL---SSHQVIVDPDSV---LDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           D    L    GL      ++ +DPD V   L           ++   +   +  ++G   
Sbjct: 27  DLDWLLDLAAGLRWPDLQRLQLDPDGVELTLACSLEALEQQWLLHRQRQIPLQHLVGRCP 86

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRI-LDLGTGTGAVCLALLK 117
           + ++ L +S D   PR ETELLVD A+A  L     +    RI  DLGTG+GAV +AL +
Sbjct: 87  WRDLELWVSPDALIPRQETELLVDLAVARGLQSPSPQWGRGRIWADLGTGSGAVAVALAR 146

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
           +   ++G  VD S  AL +A+ N  +      +   Q  W+  +    G  D++VSNPPY
Sbjct: 147 QLSGWQGHAVDCSAAALALARRNLESWADGMAWQLHQGSWWQPLRPWWGQLDLVVSNPPY 206

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I + +VD L   VRD +PR++LDGG+DGL   R + DG +  L   G   +E  ++Q   
Sbjct: 207 IPAGVVDQLDPVVRDHEPRLALDGGLDGLDCCRLLLDGAAEALAPGGWLLLEHHHDQSEA 266

Query: 235 VVRIFESRKLFLVNAFKDYGGN 256
           V+ +  +  L  V A +D  G 
Sbjct: 267 VLALMTNAGLRDVQAAQDLEGI 288


>gi|222152014|ref|YP_002561174.1| hypothetical protein MCCL_1771 [Macrococcus caseolyticus JCSC5402]
 gi|222121143|dbj|BAH18478.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 279

 Score =  199 bits (506), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 15/260 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   +  +  LS   +++  +  L D +       I R ++HE +  I G++ FY  +  
Sbjct: 28  ATFLMMDLFDLSRIDIML-GERQLSDDECAQYKEGIARLVRHEPLAHITGFQMFYERKFM 86

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PRPETE LV  ALA             + D+GTG+GA+   +  ES       
Sbjct: 87  VDERVLVPRPETEELVALALAHV------SHSDVVADIGTGSGAIAATVQLES-GCTMYA 139

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCL 183
            DIS +AL++A  N     +  +    + D    +       D ++SNPPYI    V  +
Sbjct: 140 SDISREALQVALHNIAL--LDAQVTCFEGDLLRPIIERGIKLDALLSNPPYISRDEVTEM 197

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESR 242
            L    FDP ++L     GL  Y+ +   +   +N+    + EIG+ Q   + + I E  
Sbjct: 198 NLTAL-FDPELALFAEDAGLVLYKRMIQSLPEVMNQGAFIAFEIGHRQAEALTQYIHEHF 256

Query: 243 KLFLVNAFKDYGGNDRVLLF 262
               VN  KD  GNDRVL F
Sbjct: 257 SHLRVNIHKDMNGNDRVLWF 276


>gi|83721211|ref|YP_442537.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis E264]
 gi|167619573|ref|ZP_02388204.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis Bt4]
 gi|257138746|ref|ZP_05587008.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis E264]
 gi|83655036|gb|ABC39099.1| hemK family protein [Burkholderia thailandensis E264]
          Length = 307

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 106/270 (39%), Gaps = 16/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLTPGEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDDYGLDERIALHHGDLYAPLPQFKWIDSAQRYDVIITNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAESMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLKDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +V   F   +L  +       G+D V L 
Sbjct: 271 ANVEAAFGGLELVWLPT---SAGDDSVFLI 297


>gi|156398472|ref|XP_001638212.1| predicted protein [Nematostella vectensis]
 gi|156225331|gb|EDO46149.1| predicted protein [Nematostella vectensis]
          Length = 214

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/214 (32%), Positives = 103/214 (48%), Gaps = 10/214 (4%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            E I  I+G  DF  + L + +    PRPETE LV+           K      LD+G+G
Sbjct: 6   REPIQYIVGDWDFRFLTLQMQAPVLIPRPETEQLVELINNHL-----KSSTFAFLDVGSG 60

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLF 165
           +GA+CL+LL E+    GV +D+S  A+++ + NA   G++ R +         +     F
Sbjct: 61  SGAICLSLLSENEKASGVAIDVSPVAVKLTRLNAHRCGMNCRLELYHCPIGELNMTLKKF 120

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D+IVSNPPYI    +  L  EV  ++ R +L GG DG+   R I     + LN++G   +
Sbjct: 121 DMIVSNPPYIPEHDMTLLQPEVASYEDRQALCGGKDGMDVIRQILAAAPQLLNRNGSIWL 180

Query: 226 EIGYNQKVDVVRIFESR---KLFLVNAFKDYGGN 256
           E        V    ESR    L L + +KD+   
Sbjct: 181 ETDLTHPPLVRDWLESRGHLGLTLHSVYKDFTNR 214


>gi|222823580|ref|YP_002575154.1| modification methylase, HemK family [Campylobacter lari RM2100]
 gi|222538802|gb|ACM63903.1| modification methylase, HemK family [Campylobacter lari RM2100]
          Length = 267

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 15/254 (5%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            LC +       + ++P+  +D++      + + R L  E    +     FY        
Sbjct: 25  ILCELLQKDKAWIFLNPEFQIDEK---IFFDYVDRFLNGEPFEYLFEKTQFYGFDFFTQK 81

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
               PR ++E+L++  L      ++      IL++G G+G + ++L+K          DI
Sbjct: 82  GVLIPRFDSEILLERCLEI----LDHNSFNNILEIGFGSGILSISLVK-LKQIFIQACDI 136

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + KAL +AK NA  + VS   +    D F +++G FD I SNPPY+++     L   V++
Sbjct: 137 NPKALNLAKKNADFHNVSNLINFQLCD-FKNMQGEFDFIFSNPPYVKNDYP--LDKWVQN 193

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P  +L GG  G      I      H  K  + + E GY+QK  + +I E         
Sbjct: 194 -EPYDALFGGDKGWEILEEIIIFAKNHNTK--VLACEFGYDQKAILNKILEENNFK-ATF 249

Query: 250 FKDYGGNDRVLLFC 263
           ++DY G DR  +  
Sbjct: 250 YQDYNGFDRAFVAW 263


>gi|291276431|ref|YP_003516203.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter mustelae 12198]
 gi|290963625|emb|CBG39457.1| putative S-adenosylmethionine-dependent methyltransferase
           [Helicobacter mustelae 12198]
          Length = 281

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 16/269 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           + L +S   L  V   +   +    D  +  +       A+    +   I  I     FY
Sbjct: 21  RPLLESEILLGFVLKTTRQTLHAWGDREIAPKDLDHFFEALNLREQGNPIEYITKEASFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                +      PRPETELL+D+        +++  V  I ++G G+G + + L  +   
Sbjct: 81  EHIFYVDHRVLIPRPETELLIDAVDFL----LQEHGVKNIAEVGVGSGIISITLALKYKD 136

Query: 122 FKGVGVDISCKALEIAKSNAVT-----NGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
              +  DIS  AL++A  N        N +  +   + ++    V +   D++++NPPYI
Sbjct: 137 ISLIATDISKDALDVATCNIAHFHTQENNLKNKIKLVHTNLLDGVKKDSLDLLIANPPYI 196

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  L   V   +P  +L GG  G      + +  S   NK    + E+G++QK  +
Sbjct: 197 ARSYP--LEPHVLL-EPHCALFGGERGDEILLELIEVAST--NKIKFLACEMGFDQKESL 251

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               +       + ++DY G DR  +  +
Sbjct: 252 QEALKKAGYR-ADFYQDYAGLDRGFVAKK 279


>gi|225462209|ref|XP_002269180.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 356

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 18/272 (6%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDP---DSVL----DDRQRFFLTNAIVRSLKHESIHRILG 56
            R+    L     + S    +     D  +       Q + +     R  +      ++G
Sbjct: 83  RRELKWLLEDALEVHSSVPQMGSHSDDRPIKLRTSLEQLYSVWR--QRIEERRPFQYVVG 140

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              + ++ L++      PRPETE+ VD          +    +   DLGTG+GA+ + + 
Sbjct: 141 CEHWRDLVLSVQDGVLIPRPETEVFVDLVGDVVTQNGDLTQGL-WADLGTGSGAIAIGIG 199

Query: 117 K-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNP 172
           +   P  + +  D+S  A+ +A  N     + +  +  Q  WF  +   EG    +VSNP
Sbjct: 200 RILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPLKDVEGKLSGLVSNP 259

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           PYI S  +  L  EV   +PR++LDGG+DG+     + +G +  L   G    E  G  Q
Sbjct: 260 PYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLKPGGFFIFETNGEKQ 319

Query: 232 KVDVVRIFESR---KLFLVNAFKDYGGNDRVL 260
              +V   E+      + V    D+ G  R +
Sbjct: 320 CKFLVDYMENESKGNFYDVKIVPDFAGIQRFV 351


>gi|33596609|ref|NP_884252.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella parapertussis 12822]
 gi|33601164|ref|NP_888724.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella bronchiseptica RB50]
 gi|33573310|emb|CAE37293.1| putative adenine-specific methylase [Bordetella parapertussis]
 gi|33575599|emb|CAE32677.1| putative adenine-specific methylase [Bordetella bronchiseptica
           RB50]
          Length = 298

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 5/231 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ +   +R  + + I R +        + G    
Sbjct: 36  NAWDEAVYLVLHGLHLPPDTLDPFLDARVLPSERSRVLDLIDRRVTERLPAAYLTGEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA  +   +   V R LD+ TG+G + +      P
Sbjct: 96  RGHRFHVDRRVIVPRSPIAELLDEGLAPWVR--DPLQVERALDMCTGSGCLAILAALAFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VD+S  ALE+A  N    G+ +R    Q + F ++    +DVIV NPPY+    
Sbjct: 154 VAQVDAVDVSSDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQAS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +D L  E R  +P ++L GG DG+   R I      +L+ DG+  +EIG+ 
Sbjct: 214 MDALPQEYR-HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHE 263


>gi|296158921|ref|ZP_06841749.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. Ch1-1]
 gi|295890796|gb|EFG70586.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. Ch1-1]
          Length = 294

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   + N I R          I      
Sbjct: 32  NAYDEAAYLVLHTLHLPLDLLEPFLDARLSAAEIDAVLNVIERRATERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGFRFYVDERVIVPRSFIGELLQDGLQPYVEDPEQ--VSAVLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+   ALE+A  N     + +R    + D ++ + E  +DVI++NPPY+ +  
Sbjct: 150 NADIDAVDLCAPALEVAMRNVTDYKLDDRIALFEGDLYAPLAERRYDVIITNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R I       L  DG+  VEIG N++  V   F
Sbjct: 210 MQELPAEYR-HEPDMALAGGADGMDIVRRIIADARNWLTDDGVLVVEIG-NERQHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWLST---SAGDDNVFLIQ 288


>gi|260440119|ref|ZP_05793935.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|291043407|ref|ZP_06569128.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
 gi|291012643|gb|EFE04628.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI2]
          Length = 303

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAYHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VGALPEEYL-HEPELALGSGADGLDVTRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|323526503|ref|YP_004228656.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1001]
 gi|323383505|gb|ADX55596.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia sp. CCGE1001]
          Length = 294

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   + N I R          I      
Sbjct: 32  NAYDEAAYLVLHTLHLPLDLLDPFMDARLSAAEIDAVLNVIERRATERVPAAYITQEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +   T  PR     L+   L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGFRFYVDERTIVPRSFIGELLQDGLQPYVEDPEQ--VSAVLELCTGSGCLAILAAHAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 VD+S  ALE+A  N     + +R    + D ++ + +  +DVI+SNPPY+ +  
Sbjct: 150 NADIDAVDLSAPALEVAARNVADYKLDDRIALFEGDLYAPLAQRRYDVIISNPPYVNAAS 209

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R I       L +DG+  +EIG N++  V   F
Sbjct: 210 MQDLPAEYR-HEPEMALAGGADGMDIVRRIIADARNWLTEDGVLVIEIG-NERQHVEAAF 267

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFC 263
               L  ++      G+D V L  
Sbjct: 268 GGLDLVWLST---SAGDDNVFLIQ 288


>gi|2576396|gb|AAB82325.1| possible protoporphyrinogen oxidase [Neisseria gonorrhoeae]
          Length = 218

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 12/200 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   L  V+  +  Q++      + D  R        R L  E +  ILG R+FY +R 
Sbjct: 28  EARMLLQYVSEYTRVQLLTRGGEEMPDEIRQRADRLAQRRLNGEPVAYILGVREFYGIRF 87

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T++ +   PRPETE LV++ LA         +  R+ DLGTG+GAV + +  E P     
Sbjct: 88  TVNPNVLIPRPETEHLVEAVLARL------PENGRVWDLGTGSGAVAVTVALERPDAFVR 141

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             DIS  ALE A+ NA   G   R +     WF      E  +D+IVSNPPYIE+     
Sbjct: 142 ASDISTPALETARKNAADLGA--RVEFAHGSWFDTDMPSERQWDIIVSNPPYIENGDKHL 199

Query: 183 LGLEVRDFDPRISLDGGIDG 202
              ++R F+P+I+L    DG
Sbjct: 200 SQGDLR-FEPQIALTDFSDG 218


>gi|87122381|ref|ZP_01078262.1| probable DNA methylase [Marinomonas sp. MED121]
 gi|86162356|gb|EAQ63640.1| probable DNA methylase [Marinomonas sp. MED121]
          Length = 301

 Score =  198 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 17/258 (6%)

Query: 14  VTGLSSHQVIVDPDSVLDD------RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           V G  + ++ +D D  L D       ++  LT    R  K   +  +LG   F  +   +
Sbjct: 47  VLG--ALRLPLDFDKDLLDCRLTIDEKKSILTMLNERISKRTPLPYLLGEAWFMGLPFKV 104

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + DT  PR     L    L        K+  + ILD+ TG+G + +         K    
Sbjct: 105 TKDTLIPRSPIMAL----LKDEFQPWLKQYPLNILDMCTGSGCLGITAALIFEDAKVDIS 160

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL++A+ N   + V E  + +QSD F   ++  +D+I+ NPPY+++       LE
Sbjct: 161 DISQAALDVARQNIEIHQVEESVEAIQSDMFEKLLQRQYDLIICNPPYVDADDYQSAPLE 220

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
               +P ++L  G DGL   R   +  + HL+ DG+   E+G N ++ +   F       
Sbjct: 221 FHR-EPELALTSGFDGLDFTRKFLNQAAEHLHDDGIIVYEVG-NSEIALQDAFPDVPFMW 278

Query: 247 VNAFKDYGGNDRVLLFCR 264
           V   +  GGN   ++  +
Sbjct: 279 VELEQ--GGNGVFIISKK 294


>gi|332675655|gb|AEE72471.1| protein methyltransferase HemK [Propionibacterium acnes 266]
          Length = 245

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 7/238 (2%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           ++          + R    E    I+G   F  +RL +    F PR ETEL+ + ++  +
Sbjct: 4   VNADDEDRFNQMVDRRRSGEPAQYIIGHAWFRGLRLEVGPGVFIPRLETELVAEQSIQEA 63

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              +       ++DL TGTGA+ LA+  E P  +   V++   AL   + N   +G    
Sbjct: 64  RRLVMSGACPSVIDLCTGTGAIALAVASEVPGSRVSAVEVDDAALTWTRRNLCDSG---- 119

Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            + L  D     +    FDV+V+NPPY+    V  +  EV + +P ++L  G DGL    
Sbjct: 120 VEVLAGDALRVPDDGRRFDVVVTNPPYLRRSDVSSIPGEVTEHEPDLALFSGDDGLDLPL 179

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
            +    +  L   GL  +E    Q+ ++V    +      +    D  G  R +   R
Sbjct: 180 LLIGRAAELLTPGGLFVMEHDETQREELVAAMATSDMWEQIEDHDDLAGRPRFVTARR 237


>gi|328866298|gb|EGG14683.1| hypothetical protein DFA_10941 [Dictyostelium fasciculatum]
          Length = 335

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 126/260 (48%), Gaps = 21/260 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           ++ DS      V GL      +  D  L   Q   L   I R L +E I  I+G + F+ 
Sbjct: 70  SMLDSRILFEHVVGL-KENARIPKDLQLTPTQNKDLQEVIERRLNNEPIAYIVGHKYFWK 128

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +   +  T  PRP++E L++  L   L   EK+  + ILDLGTGTG + L+LL+E    
Sbjct: 129 HKFKCNHSTLIPRPDSETLIEQILE--LHNYEKQLPLNILDLGTGTGCLLLSLLEEFSNS 186

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVEGLFDVIVSNPPY 174
           KGVG+D S  AL++AK N+++  +  R   +QS+W         ++V   +++I+SNPPY
Sbjct: 187 KGVGIDQSLDALKVAKENSISLKMDNRSTFIQSNWVDSIVNQQHNNVPLKYNLIISNPPY 246

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKD--------GLCS 224
           I       L   V+ ++P  +L    +GL  Y  I+  + +H  L++D            
Sbjct: 247 ISENEYQTLNPTVKQWEPITALVANDNGLREYDIISKSIRKHNLLSQDSNTLSNIPSFLV 306

Query: 225 VEIGYNQKVDVVRIFESRKL 244
            EIG+ Q+  V ++      
Sbjct: 307 FEIGHTQEESVKKLVVDNGF 326


>gi|169628534|ref|YP_001702183.1| modification methylase HemK [Mycobacterium abscessus ATCC 19977]
 gi|169240501|emb|CAM61529.1| Probable modification methylase HemK [Mycobacterium abscessus]
          Length = 280

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 102/264 (38%), Gaps = 19/264 (7%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRDFYN 62
           D+      + G+S  Q+         +    F     + + +  +   +  ++G   F  
Sbjct: 26  DAEELAAHLLGVSRTQL------RFTEAAADFPGRYRDLVAQRARRIPLQHLVGSAAFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +    F PRPETE L   A     P         +++L  G+ A+ +AL +  P  
Sbjct: 80  IEVRVGPGVFIPRPETESLYAWAAGQLAPH------ATVVELCAGSAALAIALAQHEPTA 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +   +++   AL   + NA   GV   + D    D  + + G  D+IV+NPPYI      
Sbjct: 134 RVTAIEVDVDALIYTRRNAEGTGVEVVQADVTSPDLLTELNGAVDLIVANPPYIPQDT-- 191

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   DP  +L  G DGL+    I     R L   G   +E   ++      +F +
Sbjct: 192 ELEPEVARHDPPQALFAGADGLAIIAPIVIAAGRLLAPGGAIGIEHDDSKGGRTRELFTA 251

Query: 242 RKLFL-VNAFKDYGGNDRVLLFCR 264
              F  V    D  G  R +   R
Sbjct: 252 CDFFDEVVQRHDLTGRPRFVTARR 275


>gi|59801654|ref|YP_208366.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA 1090]
 gi|194099064|ref|YP_002002145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae NCCP11945]
 gi|239999365|ref|ZP_04719289.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|240014548|ref|ZP_04721461.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae DGI18]
 gi|240016993|ref|ZP_04723533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA6140]
 gi|240081435|ref|ZP_04725978.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|240113630|ref|ZP_04728120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|240118353|ref|ZP_04732415.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|240121070|ref|ZP_04734032.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID24-1]
 gi|240123900|ref|ZP_04736856.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|240126100|ref|ZP_04738986.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|254494094|ref|ZP_05107265.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|268595187|ref|ZP_06129354.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268597536|ref|ZP_06131703.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268599691|ref|ZP_06133858.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|268604066|ref|ZP_06138233.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268682525|ref|ZP_06149387.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268684689|ref|ZP_06151551.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|293398711|ref|ZP_06642887.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Neisseria gonorrhoeae F62]
 gi|59718549|gb|AAW89954.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934354|gb|ACF30178.1| Hypothetical protein NGK_1520 [Neisseria gonorrhoeae NCCP11945]
 gi|226513134|gb|EEH62479.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 1291]
 gi|268548576|gb|EEZ43994.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae 35/02]
 gi|268551324|gb|EEZ46343.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae FA19]
 gi|268583822|gb|EEZ48498.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae MS11]
 gi|268588197|gb|EEZ52873.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID1]
 gi|268622809|gb|EEZ55209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID332]
 gi|268624973|gb|EEZ57373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-92-679]
 gi|291610851|gb|EFF39950.1| protein-(glutamine-N5) methyltransferase, 50S ribosomal protein
           L3-specific [Neisseria gonorrhoeae F62]
          Length = 303

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VGALPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|115352116|ref|YP_773955.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ambifaria AMMD]
 gi|115282104|gb|ABI87621.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 302

 Score =  198 bits (505), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A+ N     + +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVARINVSDYSLDDRITLHRGDLYAPLPAFRAEPDARYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     + L+ DG+  VEIG N++ 
Sbjct: 210 YVNATSMAALPPEYR-HEPEMALAGGEDGMDIVRRIISEAHKWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDTVFLIQ 294


>gi|300115419|ref|YP_003761994.1| ribosomal protein L3-specific protein-(glutamine-N5)
           methyltransferase [Nitrosococcus watsonii C-113]
 gi|299541356|gb|ADJ29673.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Nitrosococcus watsonii C-113]
          Length = 303

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 109/266 (40%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
            A+ ++ + +     L    +  +   + L + ++  +   + R ++    +  +     
Sbjct: 40  NAIDEATALILHTLHLPPRDLPPELFGAHLTEVEKHKVLALLERRIRERIPVPYLTREAW 99

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +      PR     L+    A   P +    V  +LDL TG+G + +A     
Sbjct: 100 FAGLSFYVDERVLIPRSPLAELIAQRFA---PFVTLESVHTLLDLCTGSGCIAIATAHAF 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P  +    DIS +AL +A+ N   +G+  +     S  F  + G  +D+IVSNPPY+   
Sbjct: 157 PEAQVDATDISEEALAVARMNIERHGLEAQVHAFSSSLFQKLGGRRYDLIVSNPPYVGQA 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  L  E    +PR +L+   +GLS    I      HLN+ G+  VE+G+++     R+
Sbjct: 217 ELAALAREY-HHEPRQALETEEEGLSIVLQILQQAPEHLNEKGILVVEVGHSEAALTERL 275

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                   +   +   G   V L  R
Sbjct: 276 -PQVPFLWLEFER---GGQGVFLLTR 297


>gi|148555444|ref|YP_001263026.1| HemK family modification methylase [Sphingomonas wittichii RW1]
 gi|148500634|gb|ABQ68888.1| modification methylase, HemK family [Sphingomonas wittichii RW1]
          Length = 274

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+   +    G+S   +++     LDD         + R + HE +  I+G RDF+ 
Sbjct: 23  ARLDAELLMAHALGVSRDAMLLGR---LDDPAPAGFAPLLARRVAHEPVAYIVGERDFWT 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +      PRP++E L+++A+         +   RILDLG G+GA+ LA L + P  
Sbjct: 80  ISLKVGPGVLIPRPDSETLIEAAVG----HFGAKGPARILDLGVGSGALLLAALAQWPAA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            G+GVD S  A  IA+ NA   G++ + +    DW   ++  FD+++ NPPY+ES  +  
Sbjct: 136 SGIGVDRSAAAAAIARDNAARLGLAGQAEIRLGDWAEGIDERFDLLLCNPPYVESGAI-- 193

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  +V + +P  +L  G DGL  YR +A  +   L   GL +VEIG  Q   V+ +F   
Sbjct: 194 LAPDVAEHEPASALFAGPDGLDDYRRLAPMIGGLLAAGGLAAVEIGAEQGDAVIALFARH 253

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
            L   +  +D  G DR +L  
Sbjct: 254 GLAG-SVRRDLAGRDRAILVR 273


>gi|317164621|gb|ADV08162.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 299

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 36  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 96  GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 153 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 213 VGALPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 271 PELPFTWLET---SGGDGFVFLLTR 292


>gi|257459362|ref|ZP_05624473.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
 gi|257443215|gb|EEV18347.1| bifunctional methyltransferase [Campylobacter gracilis RM3268]
          Length = 256

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 15/257 (5%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L     LS  Q+++     L     F +   I        +  I    +F   +  
Sbjct: 10  AREILKFCERLSDEQLVLRCSEELAHEAEFRVK--IAEFKDGRPLEYITQSCEFMGFKFY 67

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +      PR ETE+LV   LA +    E     RI ++GTG+G + + L K  P  +   
Sbjct: 68  VDERVLIPRCETEILVKKTLALAQSLGE----PRICEIGTGSGIIAICLKKLLPSCRIAA 123

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  ALE+A++NA ++G     + +   +   + G FD+IVSNPPYI +     L   
Sbjct: 124 SDISADALEVARANAASSGAD--VEFVHCAYADEIAGEFDLIVSNPPYIANSY--TLDAR 179

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           V   +P+ +L GG  G    + I    +R        + E+GY+QK  +      +    
Sbjct: 180 VLQ-EPKQALFGGERGDEILKRIVLIAARRAK---FLACEMGYDQKQSLSAFLREQGFR- 234

Query: 247 VNAFKDYGGNDRVLLFC 263
              +KD    DR  +  
Sbjct: 235 AEFYKDLAQFDRGFVAR 251


>gi|332299427|ref|YP_004441348.1| modification methylase, HemK family [Porphyromonas asaccharolytica
           DSM 20707]
 gi|332176490|gb|AEE12180.1| modification methylase, HemK family [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 302

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  ILG   F +  L
Sbjct: 37  SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  L            +R+LD+G G+  + + +    P ++  
Sbjct: 97  TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 153

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPPYIES 177
            +D S +AL  A  N    GV+     L+ D F    G          D++VSNPPYI  
Sbjct: 154 AMDQSEQALYYAAQNVRQTGVA--VQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPE 211

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVD 234
                +   V + +P+ +L     D L +YR +A  V +  +         E  +    +
Sbjct: 212 CDKATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQIRSPHAPPTLYCETHHKLAHE 271

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +  + E           D  G +R +   
Sbjct: 272 IATLCERAGAISSEVLTDLTGRERFVQAT 300


>gi|296113394|ref|YP_003627332.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
           catarrhalis RH4]
 gi|295921088|gb|ADG61439.1| ribosomal large subunit L3 glutamine methyltransfere [Moraxella
           catarrhalis RH4]
          Length = 370

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 109/268 (40%), Gaps = 34/268 (12%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   D     C++T                  ++  LT    R ++ + +  ++    F
Sbjct: 88  LEWSADEQILACKLT---------------PSEKQEVLTLLSERIIQRKPLSYLINLAYF 132

Query: 61  YNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDLG 105
             +   +      PR     L++                  +  L   +     RILDL 
Sbjct: 133 CGLPFYVDERVLIPRSPIAELINQQFYPYFDVDDVRKNSFFSHGLEESQLAAPERILDLC 192

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG 163
           TG+G + +AL K  P       DI   ALE+A +N   + ++ + + L+S+ F+ +  E 
Sbjct: 193 TGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFAKLPAEN 252

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +++IV+NPPY+++ ++  L  E    +P  +L  G DGL     I      +L KDGL 
Sbjct: 253 QYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYLTKDGLL 311

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             E+G + +  + + +   +   +   K
Sbjct: 312 VCEVG-DSEWALRQAYPEIQFDWLTFEK 338


>gi|284993169|ref|YP_003411724.1| modification methylase, HemK family [Geodermatophilus obscurus DSM
           43160]
 gi|284066415|gb|ADB77353.1| modification methylase, HemK family [Geodermatophilus obscurus DSM
           43160]
          Length = 287

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 10/232 (4%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L + + R +  E +  +LGW  F  +R+ +    F PR  T LLV+ A+A      + 
Sbjct: 41  AHLASLLDRRVAGEPLELVLGWTAFCGLRVAVEPGVFVPRQRTALLVERAVALLR---DA 97

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GAV LA+       +    D+   A+  A+ N    G       L +
Sbjct: 98  PRTPLVVDLCCGSGAVGLAVATALGPVELHAADVDPAAVRCARRNLAGVGGRVHQGDLYA 157

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + + G  D++  N PY+ S  +  +  E RD +PR +LDGG DG    R +A     
Sbjct: 158 ALPAGLRGRVDLLAVNAPYVPSAALALMPPEARDHEPRTALDGGPDGTGLQRRVAAEARD 217

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR---VLLFCR 264
            L   G   VE    Q        E   L  V    D    +R   V++  R
Sbjct: 218 WLAPGGSLIVETSVRQAPHTAAAVEGAGLRAVVVRDD----ERDATVVVGNR 265


>gi|115522953|ref|YP_779864.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisA53]
 gi|115516900|gb|ABJ04884.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisA53]
          Length = 340

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 12/253 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVR 64
           ++   +C    L          + +   +   L + I R +   +    ++       + 
Sbjct: 76  EAAFLVCETLHLPLDHFDNFATARVTSAESKKLLDIIERRVTTRKPAAYLVNKIYMRGLS 135

Query: 65  LTLSSDTFEPRPETELLV-------DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             +      PR     L+       D A + +L   +   V  +LDL TG+G + +   +
Sbjct: 136 FYVDERVIVPRSYIGELLTSHFGDPDDAESAALIG-DPDAVENVLDLCTGSGCLAILASR 194

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
                    VD+S  AL +A  N   +G+ +R      D F+ ++G+ +D+I+SNPPY++
Sbjct: 195 HFHNAHVDAVDLSKDALAVAARNVAEHGLDDRIALHHGDLFAPLQGMYYDLIISNPPYVD 254

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  E R  +P+++ DGG DGL   R I DG   HL   G    EIG   +  + 
Sbjct: 255 AEGMAGLPPECRA-EPKMAFDGGEDGLDIVRRILDGARMHLQPHGGLLCEIGRG-REAME 312

Query: 237 RIFESRKLFLVNA 249
             F    L  ++ 
Sbjct: 313 AAFPELPLLWLDT 325


>gi|332283976|ref|YP_004415887.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
 gi|330427929|gb|AEC19263.1| heme biosynthesis protein [Pusillimonas sp. T7-7]
          Length = 298

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 11/246 (4%)

Query: 23  IVDP--DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           ++DP  D+ +   +R      + R +  H     + G       R  +      PR    
Sbjct: 55  MLDPFLDARVLPAERERYLKLLERRITEHVPAAYLTGEAWLQGHRFVVDQRVIIPRSPIS 114

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            L+D  LA  +   +  DV  +LDL TG+G + +      P  +   VD+S  ALE+A  
Sbjct: 115 ELLDDGLAPWV--ADADDVDFVLDLCTGSGCLAVLAALAFPNAQVDAVDLSEHALEVADE 172

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           N   +G+  R  T  SD F  +    + +I+ NPPY+ +  ++ L  E R  +P ++L G
Sbjct: 173 NIELSGLDGRITTHCSDLFEQLPDCEYKLIICNPPYVNNHSMEHLPQEYR-HEPTMALAG 231

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           G DG+   R +       +  DGL  +EIG+  +  +    E   ++L     D    D+
Sbjct: 232 GDDGMDLIRRLLQQAPAFMAPDGLLVLEIGHEYQNFLAAFPELDPVWLSTENTD----DQ 287

Query: 259 VLLFCR 264
           +LL  R
Sbjct: 288 ILLLTR 293


>gi|118096741|ref|XP_414261.2| PREDICTED: similar to HEMK homolog [Gallus gallus]
          Length = 352

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 21/283 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDS---VLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     +D +     L   Q+  +     + L+   +  +LG  
Sbjct: 68  EARESSEYIVSFVLG-AKTFQSLDSEKLRAPLTAVQQEQIQQLSCKRLERMPVQYVLGEW 126

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--------DVVRILDLGTGTGA 110
           DF N+ L +    F PRPETE L+   +     + E +            IL++G G+GA
Sbjct: 127 DFQNLTLKMRPPVFIPRPETEDLISLVVEEESRKCEVKNSAFSVAVPPPVILEIGCGSGA 186

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGL 164
           + L+LL + P  + + VD    A+++ + N     +  R   L  +            G 
Sbjct: 187 IALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQGRIHVLHHNVSYGSAKHLLPWGP 246

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D IVSNPPY+    +  L  E+  ++   +LDGG DG+   +TI       L   G   
Sbjct: 247 MDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKTILTLAPTLLKDSGSVF 306

Query: 225 VEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           +E+       V     ++    L L    KD+ G  R L   +
Sbjct: 307 LEVDPRHPAMVEDWLTAQPDLFLTLRAVHKDFCGKPRFLHIQK 349


>gi|311740613|ref|ZP_07714440.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311304133|gb|EFQ80209.1| protein-(glutamine-N5) methyltransferase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 278

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 14/261 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      +       + +D   +            + R    E +  +LG   F  + L
Sbjct: 27  DARIMAAHLMHCGHMDIPLDQSPMPGFD--VAFDALLRRREAREPLQYVLGSAWFGPLEL 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE++ D A       +   D  R++DL TGTGA+ L L    P  +  
Sbjct: 85  KVGPGVFIPRPETEVMADWA-------VRNVDGPRLVDLCTGTGALALYLAHYLPKAQVR 137

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            V+++  AL    +N    GV   + D    D  +   G  D++V+NPPY+       L 
Sbjct: 138 AVELADAALAYTHANTHNTGVEVIQADATADDTLADWNGTVDLLVTNPPYVP--ETPDLE 195

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-K 243
            EV   DP  ++  G DG+     +   ++R +   G  ++E   +    V         
Sbjct: 196 PEVY-HDPHNAVFAGADGMGVITGLIPTIARLVRPGGKVAIEHDDSTSEAVQAAVARHGG 254

Query: 244 LFLVNAFKDYGGNDRVLLFCR 264
              + A +D  G  R +   R
Sbjct: 255 FKQIAALQDLTGTSRFVTAVR 275


>gi|254252046|ref|ZP_04945364.1| Methylase [Burkholderia dolosa AUO158]
 gi|124894655|gb|EAY68535.1| Methylase [Burkholderia dolosa AUO158]
          Length = 302

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPP 173
             +   VD+S  AL++A+ N    G+ +R    + D ++ +          +DVI+SNPP
Sbjct: 150 NAEIDAVDLSADALQVAEINVRDYGLEDRISLHRGDLYAPLPALRTQPGARYDVILSNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I       L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHNWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLALTWLPTSAGDDAVFLIQ 294


>gi|295839269|ref|ZP_06826202.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
 gi|295827385|gb|EDY42652.2| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB74]
          Length = 261

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 5/215 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R +  E +  ++G   F  +R+ +    F PR  +E LV  AL      +  R
Sbjct: 34  ELDALVERRVAGEPLEYVVGHAVFRGLRIEVGPGVFVPRGRSEFLVARALD----GVRAR 89

Query: 97  DVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
             V +LDL  G+GA+ LAL     P       D+   AL  A+ N    G       L +
Sbjct: 90  GAVTLLDLCCGSGALGLALRTALGPRATLHAADLDPGALRWARRNLAPVGAHVYEGDLYA 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               ++ G  DV+ +N PY+ S  V  L  E R  +P ++LDGG DGL   R +A   + 
Sbjct: 150 PLPPALRGRVDVLTANVPYVPSEEVRLLPAEARAHEPLLALDGGADGLDLVRRVAREATA 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            L  +G   +E G  Q  +V  IF +  L      
Sbjct: 210 WLAPNGRLLIESGDRQAPEVAAIFTTAGLQAETTH 244


>gi|289643791|ref|ZP_06475899.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
 gi|289506397|gb|EFD27388.1| modification methylase, HemK family [Frankia symbiont of Datisca
           glomerata]
          Length = 281

 Score =  198 bits (504), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 58/220 (26%), Positives = 88/220 (40%), Gaps = 7/220 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-- 89
            R    L   + R      +  ILGW  F  +R+ +    F PR  TE LV  A+A +  
Sbjct: 40  ARTEDELAAMVDRRAAGLPLEHILGWAWFCGLRIAVDPGVFVPRRRTEFLVQQAVALAQR 99

Query: 90  -----LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                + +   R    ++DL  G+GAV +ALL      +    D+   A+  A+ N    
Sbjct: 100 LAAGRVGQPPNRPAAVVVDLCCGSGAVGVALLMALDAVELYATDLDPAAVRCARRNLAGA 159

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G       L      ++ G  D++ +N PY+ +  +  L  E R  + R++LDGG DGL 
Sbjct: 160 GGQVYEGDLYEPLPVTLRGRVDILAANAPYVPTEEMGLLPPEARVHERRMALDGGTDGLD 219

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             R +     + L   G   VE    Q    V       L
Sbjct: 220 VLRRVTAEAPQWLAPGGRLLVETSGRQAARTVETVARNGL 259


>gi|294789325|ref|ZP_06754563.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Simonsiella muelleri ATCC 29453]
 gi|294482750|gb|EFG30439.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Simonsiella muelleri ATCC 29453]
          Length = 329

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 8/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  L + I R + +   +  +      
Sbjct: 56  NAYDEAAYLILYTLHLPLDTLEPYLDAQLLPEEQDHLLDLIERRVVERIPVAYLTQHAMQ 115

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+   L   +   E   +   LDL TG+G + + +    P
Sbjct: 116 GEFEFYVDDRVIVPRSFIYELLGEPLRPWIEYDEL--IHHALDLCTGSGTLAIQMAHYYP 173

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDIS  ALE+A  N    G+ +R   + +D F  +E  +D+I+SNPPY++   V
Sbjct: 174 DAQIDAVDISLDALEVASINIDDYGLRQRIQLIHADLFDGLENTYDLIISNPPYVDEESV 233

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E    +P ++L  G DGL   R I +  ++ LN +G+  VEIG+N +  + R + 
Sbjct: 234 KNLPDEYL-HEPTLALGSGKDGLDITRKIINQAAQFLNPNGVLLVEIGHN-RDVLERAYP 291

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
           +     +      GG+  V L  R
Sbjct: 292 NLDFVWLET---SGGDGFVFLLTR 312


>gi|82702975|ref|YP_412541.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrosospira multiformis ATCC 25196]
 gi|82411040|gb|ABB75149.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrosospira multiformis ATCC 25196]
          Length = 302

 Score =  198 bits (504), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 9/264 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFY 61
           A  ++   +     L   ++    D+ +   +   +   I R    +     +       
Sbjct: 37  AYDEAAYLILHTLHLPLDRLEPFLDARILPGELELVLKIIERRATEKIPAAYLTREAWLG 96

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +    +      PR     L+   LA  +   E  +V   LDL TG+G + + L    P 
Sbjct: 97  DFHFYVDERVIVPRSFIAELLREQLAPWME--EPAEVYSALDLCTGSGCLAILLAHAFPN 154

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
                 DIS  AL++A+ N    G+ +R D +QSD F+++ +  +D+IVSNPPY+ +  +
Sbjct: 155 AAIDATDISANALQVAEKNVEEYGLEDRIDLIQSDLFAALADRRYDLIVSNPPYVNAEAM 214

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P+ +L  G DGL   + I    + HL  DGL  VEIG+N +  + R F 
Sbjct: 215 AALPEEYR-HEPQSALASGEDGLKATKVILRDAANHLTADGLLIVEIGHN-REALERAFP 272

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
                 ++      G++ V L  R
Sbjct: 273 DTPFTWLDT---SAGDEFVFLLKR 293


>gi|325921318|ref|ZP_08183177.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
 gi|325548203|gb|EGD19198.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas gardneri ATCC 19865]
          Length = 308

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLRSEKEQVLGLFERRISERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PEVDFAWVEF 279


>gi|326559238|gb|EGE09669.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 46P47B1]
 gi|326559877|gb|EGE10277.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 7169]
 gi|326560774|gb|EGE11141.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 103P14B1]
 gi|326563515|gb|EGE13774.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 12P80B1]
 gi|326569637|gb|EGE19689.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC1]
 gi|326570118|gb|EGE20163.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC8]
 gi|326570856|gb|EGE20880.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis BC7]
 gi|326574405|gb|EGE24347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis 101P30B1]
 gi|326576001|gb|EGE25924.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis CO72]
 gi|326576413|gb|EGE26322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Moraxella catarrhalis O35E]
          Length = 370

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 109/268 (40%), Gaps = 34/268 (12%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   D     C++T                  ++  LT    R ++ + +  ++    F
Sbjct: 88  LEWSADEQILACKLT---------------PSEKQEVLTLLSERIIQRKPLSYLINLAYF 132

Query: 61  YNVRLTLSSDTFEPRPETELLVDS---------------ALAFSLPRIEKRDVVRILDLG 105
             +   +      PR     L++                  +  L   +     RILDL 
Sbjct: 133 CGLPFYVDERVLIPRSPIAELINQQFYPYFDVDDVRKNSFFSHGLEESQLAAPERILDLC 192

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EG 163
           TG+G + +AL K  P       DI   ALE+A +N   + ++ + + L+S+ F+ +  E 
Sbjct: 193 TGSGCIAIALAKAFPDANIDATDIDKDALEVAWTNVEHHELAHQVNLLESNLFAKLPAEN 252

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +++IV+NPPY+++ ++  L  E    +P  +L  G DGL     I      +L KDGL 
Sbjct: 253 QYELIVTNPPYVDAAVMAELPPEFL-HEPEHALAAGQDGLDLVHQILYHAPDYLTKDGLL 311

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             E+G + +  + + +   +   +   K
Sbjct: 312 VCEVG-DSEWALRQAYPEIQFDWLTFEK 338


>gi|207091970|ref|ZP_03239757.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 242

 Score =  198 bits (503), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 11/246 (4%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                +       L+  +       + + L    I  +L   DFY     ++     PRP
Sbjct: 3   KERVFLHTHAYLELNHEEEMRFFELVEKRLNDCPIEYLLESCDFYGRSFFVNEHVLIPRP 62

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ETE+LV   L      I +  +  I ++G G+  V ++L  E+P       DIS KALE+
Sbjct: 63  ETEILVQKTLDI----ISQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEV 118

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N     + ER    Q+  +  +    +++VSNPPYI       L   V   +P  +L
Sbjct: 119 ASKNIERFNLKERVFLKQTHLWDRMP-TIEMLVSNPPYIARGYP--LEKSVLK-EPHKAL 174

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            GG+ G    + I    +         + E+GY+Q   +    E         +KD  G 
Sbjct: 175 FGGVKGDEILKEIILLAAELKIP--FLACEMGYDQLKSLKECLEFCGY-DAEFYKDLSGF 231

Query: 257 DRVLLF 262
           DR  + 
Sbjct: 232 DRGFIG 237


>gi|206560466|ref|YP_002231230.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia cenocepacia J2315]
 gi|198036507|emb|CAR52404.1| putative DNA methylase [Burkholderia cenocepacia J2315]
          Length = 302

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLHTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATDRVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A  N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVAAINVRDYGLEDRIGLHRGDLYAPLPAFRTDPDSRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G+D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGDDAVFLIQ 294


>gi|167837055|ref|ZP_02463938.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia thailandensis MSMB43]
          Length = 307

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 106/270 (39%), Gaps = 16/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  ALE+AK N    G+ ER    + D ++ +           +D I++NP
Sbjct: 153 NASVDAVDLSADALEVAKINRDDYGLDERIALYRGDLYAPLPQFKWIDPAQRYDAIITNP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ S  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNSDSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLKDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +V   F    L  +       G+D V L 
Sbjct: 271 ANVEAAFGGLDLVWLPT---SAGDDSVFLI 297


>gi|261400910|ref|ZP_05987035.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria lactamica ATCC 23970]
 gi|269209279|gb|EEZ75734.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Neisseria lactamica ATCC 23970]
 gi|309378145|emb|CBX23213.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 305

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 111/265 (41%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   I R   +H     +      
Sbjct: 42  NAYDEAAYLILHTLNLPLDVLDPYLDARLLRAEKEKVLAIIERRAVEHIPAAYLTRQAWQ 101

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 102 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 158

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  + G +D+IVSNPPY+++  
Sbjct: 159 PDAQIDAVDVSLDALEVAGINIEDYGLEERIRLIHTDLFEGLAGTYDLIVSNPPYVDAES 218

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 219 VEALPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 276

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 277 PELPFTWLET---SGGDGFVFLLTR 298


>gi|190575300|ref|YP_001973145.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Stenotrophomonas maltophilia K279a]
 gi|190013222|emb|CAQ46856.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 309

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLQAEKLRVLELFQRRIDERIPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +          PR     L++       P +  RDV R LDL TG+G + +A+    P
Sbjct: 96  AGLSFKSDKRALVPRSPIAELIECGFE---PWLAGRDVSRALDLCTGSGCIAIAMGHYYP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            ++  GVD+S  AL +A+ N      +     L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 NWEVDGVDLSDDALSLAEENKERLQ-AHNVTLLKSDLFNGLTGRHYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I      HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPEMGLRAGDDGLDLVLKILRDAPLHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 270 PEVDFAWIEF 279


>gi|240128575|ref|ZP_04741236.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268686967|ref|ZP_06153829.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
 gi|268627251|gb|EEZ59651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae SK-93-1035]
          Length = 303

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAYHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VGALPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|51598457|ref|YP_072645.1| HemK family methylase [Borrelia garinii PBi]
 gi|51573028|gb|AAU07053.1| HemK family methylase, putative [Borrelia garinii PBi]
          Length = 273

 Score =  198 bits (503), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 8/242 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKMKKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL     +I++    +ILDL  G+G + L++   +   K    DIS KAL+I + N 
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYTKK-KVTLSDISIKALKIVEKNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               + +  + + S+    ++  FD+I++NPPY+    ++         +P  +L G G 
Sbjct: 150 KKLKLEKFIEIIHSNLLKFIKERFDIIITNPPYLNKEELEI--KNKIKKEPAKALLGFGK 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL+  R I       LN +GL  +E    Q   +      +    +    D     R L
Sbjct: 208 DGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARAL 267

Query: 261 LF 262
           + 
Sbjct: 268 VL 269


>gi|297797429|ref|XP_002866599.1| methylase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312434|gb|EFH42858.1| methylase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 103/243 (42%), Gaps = 12/243 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
              + + L     R  K      ++G   + ++ L +      PRPETEL+VD      +
Sbjct: 125 SLEELYDLWR--QRIEKRRPFQYVVGCEYWRDLVLCVEEGVLIPRPETELIVDMV-EELV 181

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            R E        DLGTG+GA+ + + K      + +  D+S  A+ +A  N    G+   
Sbjct: 182 TRDEWFKKGFWADLGTGSGAIAIGIAKVLGSRGRVIATDLSPVAVAVAGKNVQRYGLEGM 241

Query: 150 FDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  +  WF  +   EG    +VSNPPYI S  +  L  EV   +P+++LDGGIDG    
Sbjct: 242 IEVREGSWFEPLKGLEGKLVGLVSNPPYIPSDDIPGLQAEVGKHEPKLALDGGIDGTDSL 301

Query: 207 RTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRK----LFLVNAFKDYGGNDRVLL 261
             +  G S+ L + G    E  G  Q   +V    S         +    D+ G +R + 
Sbjct: 302 LHLCYGASQMLQRGGFFVFETNGEKQSKMIVDYMMSNDLKDCFSDLKIVSDFAGINRFVT 361

Query: 262 FCR 264
             R
Sbjct: 362 GFR 364


>gi|219684666|ref|ZP_03539609.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr]
 gi|219672028|gb|EED29082.1| putative protoporphyrinogen oxidase [Borrelia garinii PBr]
          Length = 273

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 8/242 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL     +I++    +ILDL  G+G + L++   +   K    DIS KAL+I + N 
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYTKK-KVTLSDISIKALKIVEKNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               + +  + ++S+    ++  FD+I++NPPY+    ++         +P  +L G G 
Sbjct: 150 KKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKEELEI--KNKIKKEPAKALLGFGK 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL+  R I       LN +GL  +E    Q   +      +    +    D     R L
Sbjct: 208 DGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARAL 267

Query: 261 LF 262
           + 
Sbjct: 268 VL 269


>gi|85059606|ref|YP_455308.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Sodalis glossinidius str. 'morsitans']
 gi|84780126|dbj|BAE74903.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 310

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+      
Sbjct: 68  LTSSERACVVERVIRRVNERIPVSYLTNKAWFCGLEFYVDDRVLIPRSPIGELITERFRD 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP         +LD+ TG+G + +A     P  +   VDI+   L +A+ N   +GV +
Sbjct: 128 LLP----YPPAHLLDMCTGSGCIAVACAYTYPEAEVDAVDIAPGVLAVAEHNIQAHGVEQ 183

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   + SD F  +  L +D I++NPPY++   ++ L  E    +P + L  G DGL   R
Sbjct: 184 RVTPILSDLFRDLPPLAYDAIITNPPYVDEEDMNDLPAEFHA-EPVLGLAAGSDGLKLVR 242

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I      +L++DG+   E+G N  V +V  +       +   +   G D V +  R
Sbjct: 243 RILAYAPDYLSEDGVLICEVG-NSMVHLVAQYPQVPFRWLEFAQ---GGDGVFMLTR 295


>gi|318061362|ref|ZP_07980083.1| methytransferase [Streptomyces sp. SA3_actG]
          Length = 314

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 13/244 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  V G ++ +     D VLD          + R +  E +  ++G   F+ 
Sbjct: 19  AEDEAELLLAAVPGDAAGRDGAGRDGVLD--------ALVARRVAGEPLEHVVGHAVFHG 70

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PF 121
           +R+ +    F PR  +E LV  ALA     +     V +LDL  G+GA+ LAL     P 
Sbjct: 71  LRIAVGPGVFVPRRRSEFLVARALA----GVRAEGAVTLLDLCCGSGALGLALRTALGPR 126

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 D+   AL  A+ N    G       L +   +++ G  DV+ +N PY+ S  V 
Sbjct: 127 ATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAALRGRVDVLTANVPYVPSEEVR 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++LDGG DGL   R +A+  +  L   G   VE G  Q  +V  IF +
Sbjct: 187 LLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPGGRLLVESGERQAPEVAGIFMA 246

Query: 242 RKLF 245
             L 
Sbjct: 247 AGLH 250


>gi|323144315|ref|ZP_08078930.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Succinatimonas hippei YIT 12066]
 gi|322415906|gb|EFY06625.1| (glutamine-N5) methyltransferase, ribosomal protein L3-specific
           [Succinatimonas hippei YIT 12066]
          Length = 333

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 13/241 (5%)

Query: 27  DSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           +S L +++R  +     + +        +     F   +  +      PR     L+++ 
Sbjct: 87  NSRLTEKERKIIAAIANKRIFLRVPTPYLTHRAFFCGHQFYVDKRVIVPRSPIAELIENG 146

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTN 144
               + R       R+LD+ TG+G + +A+        +   VDIS +ALE+A+ N    
Sbjct: 147 FDPFIDRTPD----RVLDMCTGSGCIAIAIALHFDGDCEVDAVDISEEALEVAEINIRGY 202

Query: 145 GVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           G+      ++SD FS++     +D+IV+NPPY+++  +  +  E  + +P ++L  G DG
Sbjct: 203 GLENCVFPIKSDLFSALPKGDKYDLIVANPPYVDAYDLSTMPKEF-EAEPELALGSGEDG 261

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L   R I      +L+ DG+  +E+G N   ++   F       ++  K  GG   V L 
Sbjct: 262 LDCARKILAQAVDYLSDDGVLIMEVG-NSAENLNDAFPHVPFHFIDLKKGGGG---VFLL 317

Query: 263 C 263
            
Sbjct: 318 T 318


>gi|302878941|ref|YP_003847505.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Gallionella capsiferriformans ES-2]
 gi|302581730|gb|ADL55741.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Gallionella capsiferriformans ES-2]
          Length = 302

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +R  + N I R + +      +      
Sbjct: 41  DAYDEAVYLILHTLHLPVDTLAPFLDAQLTPAERGEVLNVIQRRVEQRIPAAYLTHEAFL 100

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +    +      PR     L+   LA  +   E   + ++LDL TG+G + +      P
Sbjct: 101 GDYSFYVDERVIVPRSFIAELLRQQLAPWI--TEPDSIGQVLDLCTGSGCLAILCADAFP 158

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
                 VD+S  AL +A+ N     ++ R   ++SD F+ + G  +D+I+SNPPY+++  
Sbjct: 159 NATVDAVDLSPDALAVAERNVTDYELASRISLIESDLFAKLSGRRYDLIISNPPYVDAES 218

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L  E    +P++SL  G DGL   R I    + HL ++G+  VEIG+N +  +   +
Sbjct: 219 VAALPAEYL-HEPKLSLGSGHDGLDATRVILKHAAEHLTENGILIVEIGHN-RDILEAAY 276

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  ++      G+  V +  R
Sbjct: 277 PKLPFTWLDVT---AGDQFVFMLHR 298


>gi|111115019|ref|YP_709637.1| HemK family methylase [Borrelia afzelii PKo]
 gi|110890293|gb|ABH01461.1| HemK family methylase, putative [Borrelia afzelii PKo]
          Length = 273

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 8/242 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  +++    + I +  K   IH IL  ++F  +  TL+     PR +TE L
Sbjct: 35  IIANIKKSLTKKEKNLFFDHIYKIEKGTPIHYILKKKEFMGIEFTLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL     +I++    +ILDL  G+G + +++       K +  DIS KAL+I + N 
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGISIAYYMKK-KVMLSDISIKALQIVEKNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               + +  + + S+    ++G  D+I++NPPY+    ++         +P  +L G G 
Sbjct: 150 KKLKLEKFVEIIHSNLLKCIKGRIDIIITNPPYLNKEELEI--KNKIKKEPAKALLGFGK 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL+  R I       LN +GL  +E    Q   +      +    +    D     R L
Sbjct: 208 DGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARAL 267

Query: 261 LF 262
           + 
Sbjct: 268 VL 269


>gi|297182949|gb|ADI19097.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium HF0070_34A12]
          Length = 247

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 83/207 (40%), Positives = 117/207 (56%), Gaps = 6/207 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              DS   L    GL    +  +  +  DD         + R L  E + RI GWR+F+ 
Sbjct: 27  PALDSRLLLGTALGLDRAVLPHETLAGFDDAAAAMFEAFLNRRLGGEPVSRIRGWREFWT 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL L+  T +PRP++E +V +ALA + P        R+LDLG GTGA+ LA L E P  
Sbjct: 87  LRLELAPATLDPRPDSETIVAAALAATDP----GKPCRMLDLGCGTGALLLACLSERPDA 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIV 180
            G GVDI+ +A+E+A  NA  NG+S R D +  D+       G++D+I+ NPPYI +  +
Sbjct: 143 TGTGVDIAGEAVEVATRNAGKNGLSARADFVIGDFSDPDVAPGIYDLILCNPPYIPAGEI 202

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYR 207
           D L +EV  FDPR++LDGG DGL  +R
Sbjct: 203 DGLAVEVACFDPRLALDGGDDGLDCWR 229


>gi|289569312|ref|ZP_06449539.1| hypothetical protein hemK [Mycobacterium tuberculosis T17]
 gi|289543066|gb|EFD46714.1| hypothetical protein hemK [Mycobacterium tuberculosis T17]
          Length = 288

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 15/255 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 43  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 100

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 101 VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 155

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 156 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 215

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 216 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 273

Query: 238 IFESRKLF-LVNAFK 251
           +  S KLF  V A K
Sbjct: 274 LVSSTKLFVDVQARK 288


>gi|21231984|ref|NP_637901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66767889|ref|YP_242651.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. 8004]
 gi|188991005|ref|YP_001903015.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. campestris str. B100]
 gi|21113717|gb|AAM41825.1| adenine-specific methylase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573221|gb|AAY48631.1| adenine-specific methylase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167732765|emb|CAP50959.1| Putative HemK-family S-adenosyl-methionine-dependent
           methyltransferase [Xanthomonas campestris pv.
           campestris]
          Length = 308

 Score =  197 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLRAEKERVLALFQRRVDERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 HWDVDGVDISDDALALAAENKARLH-ADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PEVDFAWVEF 279


>gi|205355564|ref|ZP_03222335.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205346798|gb|EDZ33430.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 264

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 108/257 (42%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC     +   + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 13  EAVFILCEYLKKNKAWLFLNQDIKIDHE---PYFELIRRFKSGEPFEYIFEKVDFWGLEF 69

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 70  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 124

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 125 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 181

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 182 WVQK-EPKEALFGGEKGYEILEKIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 237

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 238 IVDFFKDEQGYNRAFIA 254


>gi|33592830|ref|NP_880474.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella pertussis Tohama I]
 gi|33572478|emb|CAE42049.1| putative adenine-specific methylase [Bordetella pertussis Tohama I]
 gi|332382243|gb|AEE67090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella pertussis CS]
          Length = 298

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 5/231 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ +   +R  + + I R +        + G    
Sbjct: 36  NAWDEAVYLVLHGLHLPPDTLDPFLDARVLPSERSRVLDLIDRRVTERLPAAYLTGEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA  +   +   V R LD+ TG+G + +      P
Sbjct: 96  RGHRFHVDRRVIVPRSPIAELLDEGLAPWVR--DPLQVERALDMCTGSGCLAILAALAFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +   VD+S  ALE+A  N    G+ +R    Q + F ++    +DVIV NPPY+    
Sbjct: 154 VAQVDAVDVSSDALEVAARNVAEYGLQDRLTLRQGNLFEALPAAAYDVIVCNPPYVNQAS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +  L  E R  +P ++L GG DG+   R I      +L+ DG+  +EIG+ 
Sbjct: 214 MGALPQEYR-HEPALALAGGADGMDLVRRILAAAPGYLSADGVLVLEIGHE 263


>gi|257056938|ref|YP_003134770.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Saccharomonospora viridis DSM 43017]
 gi|256586810|gb|ACU97943.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Saccharomonospora viridis DSM 43017]
          Length = 287

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 16/267 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++ + P  ++D      +   +    K   +  + G      V +
Sbjct: 28  DAELIAAHVLGVERGRLPLVP--LVDPPVVEAIRQLVAERAKRVPLQYLTGEAVVGGVSV 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE      L + L  ++ R+   ++DL TG+GA+ LA+ +  P     
Sbjct: 86  QVGPGVFIPRPETE----LLLEWGLKLLKGREHPVVVDLCTGSGALALAVAEARPDAVVY 141

Query: 126 GVDISCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            VD    AL  A+ NA     +          D      F+ ++GL D+++ NPPY+   
Sbjct: 142 AVDNDPSALAWARHNADLRAEAGDTPIRLYSGDVTDDTVFAELDGLVDLVLCNPPYVPEG 201

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
               +  EV D+DP  ++    DGL   R +    +R L   G  ++E        V  +
Sbjct: 202 TP--VPPEVADYDPPHAVFAPEDGLGIIRHVVTMAARLLRPGGGVAIEHDETHAHSVPPL 259

Query: 239 FESRK-LFLVNAFKDYGGNDRVLLFCR 264
            E R+ L  V   KD  G  R +   R
Sbjct: 260 LEVRRVLTDVTTHKDLAGRPRFVTARR 286


>gi|257069074|ref|YP_003155329.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachybacterium faecium DSM 4810]
 gi|256559892|gb|ACU85739.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Brachybacterium faecium DSM 4810]
          Length = 301

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 106/266 (39%), Gaps = 17/266 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ + +    G     V++D    L       L    VR  + E +  ILG   F  + L
Sbjct: 32  DARALIAHAAGTEQPLVMLD---ELPQGFTQRLEQLTVRRERREPLQLILGRAPFRRLML 88

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPET    + AL           +  ++DL  G+GA+  A+L E P  + +
Sbjct: 89  DVEPGVFIPRPET----ELALDLLREHTTG-PLTEVVDLCAGSGALGAAVLDEIPGARVL 143

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIV 180
            V+I   A  + + N    G   R   L++D  + V         D ++SNPPYI    V
Sbjct: 144 AVEIDPAAAALTRRNLDRAG-PGRGRVLEADLCAEVPELAAAAPVDAVLSNPPYIPPEAV 202

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                EVR+ DP  +L  GG DGL   R + D   R L   G+  +E    Q        
Sbjct: 203 PR-DAEVREHDPHRALFGGGPDGLEVPRAVLDWARRLLRPGGVLVMEHADVQGAAAREAA 261

Query: 240 ESR-KLFLVNAFKDYGGNDRVLLFCR 264
                   ++   D  G DR L+  R
Sbjct: 262 AVNGGFDQLSTLPDLTGRDRFLVARR 287


>gi|145589641|ref|YP_001156238.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145048047|gb|ABP34674.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 298

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 110/270 (40%), Gaps = 17/270 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRD 59
           + A  ++   + +   LS  + +   +  +   Q+   +  A  R    + +  ILG   
Sbjct: 34  IDAQSEALWIVSKQLDLSPTEALNHLEDQISADQQLKASAVADTRISTRKPLAYILGEAW 93

Query: 60  FYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
              V    S  +  PR     L+ D +L   LP          LDL TG G++ + L   
Sbjct: 94  LMGVPFFCSEQSIVPRSWIAELIIDGSLEPWLPADGNA-----LDLCTGNGSLAILLALS 148

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPP 173
            P       DIS  AL +A  N   +G+  + +    D + ++        FD+I+ NPP
Sbjct: 149 CPDIHVSACDISMPALSVAARNVDRHGLKSQIELFDGDLWDAIPEPNEDNVFDLIICNPP 208

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  ++ L  E    +P ++L GG DG+   R I      +L++ G   +EIG N+  
Sbjct: 209 YVNATSMNALPAEYHA-EPALALAGGEDGMDLIRRIITQAPDYLSERGAILIEIG-NEYE 266

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +  + F       +       G ++VLL  
Sbjct: 267 NFKKAFPQIPAIWMEV---SAGEEQVLLIQ 293


>gi|325518136|gb|EGC97920.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia sp. TJI49]
          Length = 302

 Score =  197 bits (501), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   + R   L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLRTLDLPLDTLEPFLDARLLPDEIEAVLAVIERRATERVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
             +   VD+S KALE+A  N    G+ +R    + D ++ +       +  +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVAAINVQDYGLGDRITLHRGDLYAPLPAFRAEPDTRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNAASMAALPPEYR-HEPEMALAGGDDGMDIVRRIVADAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            V   F       +       G D V L  
Sbjct: 268 HVEAAF---GGLELTWLPTSAGEDSVFLIQ 294


>gi|325915515|ref|ZP_08177826.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538231|gb|EGD09916.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 308

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLRSEKEQVLGLFERRINERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|78066811|ref|YP_369580.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia sp. 383]
 gi|77967556|gb|ABB08936.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Burkholderia sp. 383]
          Length = 302

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 15/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   + R   L    +    D+ L   +   +   I R          +      
Sbjct: 32  NAYDEAAYLVLRTLDLPLDTLEPFLDARLLPDEIAAVLAVIERRATDRVPAAYLTHEAWM 91

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 92  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 149

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPP 173
             +   VD+S KALE+A+ N    G+ +R    + D ++ +          +DVI++NPP
Sbjct: 150 NAEIDAVDLSDKALEVAEINVRDYGLEDRVGLHRGDLYAPLPAFRTDPGSRYDVILTNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R I     R L+ DG+  VEIG N++ 
Sbjct: 210 YVNASSMAALPPEYR-HEPEMALAGGDDGMDIVRRIVAEAHRWLHDDGVLVVEIG-NERE 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +V   F       +       G+D V L  
Sbjct: 268 NVEAAF---GGLELTWLPTSAGDDAVFLIQ 294


>gi|254520952|ref|ZP_05133007.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas sp. SKA14]
 gi|219718543|gb|EED37068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Stenotrophomonas sp. SKA14]
          Length = 309

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLQAEKLRVLELFQRRIDERIPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L++       P +  RDV R LDL TG+G + +A+    P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIECGFE---PWLAGRDVYRALDLCTGSGCIAIAMGHYYP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            ++  GVD+S  AL +A+ N      +   + L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 NWQVDGVDLSDDALSLAEENRERLQ-AYNVNLLKSDLFNGLSGRHYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I      HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPKEY-SYEPDMGLRAGDDGLDLVLKILRDAPLHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 270 PEVDFAWIEF 279


>gi|124023898|ref|YP_001018205.1| protein methyltransferase [Prochlorococcus marinus str. MIT 9303]
 gi|123964184|gb|ABM78940.1| putative protein methyltransferase [Prochlorococcus marinus str.
           MIT 9303]
          Length = 306

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 76/248 (30%), Positives = 116/248 (46%), Gaps = 9/248 (3%)

Query: 21  QVIVDPDS-VLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           Q+ +DP   VL +R    L     + L H   +  ++G   + +V L +S+    PR ET
Sbjct: 45  QLYLDPRRSVLLERSLDQLAMIWKQHLDHHIPLQHLIGCCPWRDVELEVSAAALIPRQET 104

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLVD AL        ++      DLGTG+GA+ +AL +  P ++G  VD S +AL +AK
Sbjct: 105 ELLVDFAL----QAFARKPFGCWADLGTGSGALAVALARALPVWRGHAVDCSIEALALAK 160

Query: 139 SNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            N         +   Q  W+  +    G F +++ NPPYI   ++  L   VRD +P ++
Sbjct: 161 RNLQRLAPHALWQLHQGSWWEPLRPWWGEFSLVLVNPPYIPEAVMAQLEPVVRDHEPHLA 220

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L GG DGL   R I  G  + L   G   +E  ++Q   V+ +   + L  V    D  G
Sbjct: 221 LCGGADGLVATRQIIVGAMQALEPGGWLFLEHHHDQSDAVLALMRQQGLENVEYKSDLLG 280

Query: 256 NDRVLLFC 263
             R  +  
Sbjct: 281 VRRFAIAR 288


>gi|295111718|emb|CBL28468.1| HemK family putative methylases [Synergistetes bacterium SGP1]
          Length = 290

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 18/271 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A++++   LC    L+S +++   +  +   +   L   + R    E +  +LG  DF
Sbjct: 25  VNAVQEARWLLCDGLRLTSAELLAHLEREVVLPE--ALEAGVRRREAGEPLQYVLGTADF 82

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES- 119
           +     +      PR +TE+LV +AL  S      R         TG  A   +  + S 
Sbjct: 83  WGRDFRVGPGVLVPRRDTEVLVRAALTSSRRTRPSRS-------WTGARAAPASPRRSSW 135

Query: 120 --PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYI 175
             P  +G+  + S  AL  A  N     +S R   L +D     +V G  D+++SNPPYI
Sbjct: 136 SAPLARGILAERSPDALRWAAENLARWNLSSRARLLPTDAPEDIAVRGECDLLISNPPYI 195

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVD 234
               +  L  EVRD +P ++LDGG+DG+  YR +       L       +E G  +Q   
Sbjct: 196 PRGAIPRLMREVRDHEPHLALDGGVDGMDCYRALLASAPAWLKPGAFVILETGESDQARA 255

Query: 235 VVRIFESRK---LFLVNAFKDYGGNDRVLLF 262
           +    E         +    D     R ++ 
Sbjct: 256 IRDAVERSPDRAFSFLQRIADDSAILRCVVL 286


>gi|325267685|ref|ZP_08134336.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans
           ATCC 33394]
 gi|324980809|gb|EGC16470.1| protein-(glutamine-N5) methyltransferase [Kingella denitrificans
           ATCC 33394]
          Length = 312

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 114/265 (43%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
            A  ++   +     L    +   +D  ++L D +   L     R  +   +  I     
Sbjct: 49  NAHDEAAYLILHTLHLPLDMLEPYLDA-ALLADEKTELLGKLRERIEQRVPVAYITQHAR 107

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             +    +      PR     L+   L+  +   E   V R LDL TG+G + + +    
Sbjct: 108 QGDFDFYVDERVIVPRSFIYELLGEPLSPWIEYPEL--VHRALDLCTGSGCLAIQMAAHY 165

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDIS  ALE+A  N     + ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 166 PAAQIDAVDISLDALEVAAVNVEDYSLQERIQLVHTDLFEGLEGTYDLIVSNPPYVDAES 225

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           VD L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  + R +
Sbjct: 226 VDALPEEYL-HEPELALGSGEDGLDATREILLQAAKFLNPRGVLLVEIGHN-RDVLEREY 283

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  ++     GG+  V L  R
Sbjct: 284 PELPFVWLDT---SGGDGFVFLLTR 305


>gi|302549270|ref|ZP_07301612.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
 gi|302466888|gb|EFL29981.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Streptomyces viridochromogenes DSM 40736]
          Length = 270

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 66/227 (29%), Positives = 97/227 (42%), Gaps = 9/227 (3%)

Query: 22  VIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           V  + ++ L     R        + R +    +  ++GW +F  +R+T++   F PR  T
Sbjct: 31  VFAEDEAELILATARTPAETAAMVERRVAGLPLELVVGWAEFRGLRVTVAPGVFVPRRRT 90

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           E LV+ ALA             +LDL  G+GAV  AL       +    DI   A+  A+
Sbjct: 91  EFLVEQALARV------PRATVVLDLCCGSGAVGAALASALGRVELHAADIDPAAVRCAR 144

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           SN    G       L      ++ G  D++ +N PY+ S  +  L LE RD +P ++LDG
Sbjct: 145 SNVAAVGGHVHQGDLFDALPGALRGRVDILAANVPYVPSDEIGLLPLEARDHEPLVALDG 204

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           G DGL   R +A    R L   G   VE    Q    +  FE   L 
Sbjct: 205 GADGLDVLRRVAAEAPRWLAPGGCVLVETSRLQAPAALTAFEGNGLT 251


>gi|270157806|ref|ZP_06186463.1| adenine-specific methylase [Legionella longbeachae D-4968]
 gi|289163925|ref|YP_003454063.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150]
 gi|269989831|gb|EEZ96085.1| adenine-specific methylase [Legionella longbeachae D-4968]
 gi|288857098|emb|CBJ10913.1| N5-glutamine methyltransferase [Legionella longbeachae NSW150]
          Length = 305

 Score =  196 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 10/242 (4%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
             ++ L   ++  L   + + + +   +  ++    F  +   +      PR     L+ 
Sbjct: 62  WLNARLTTSEKKHLCQQLEKRINQRVPVPYLIKEAYFCELPFYVDERVLIPRSPIAELIK 121

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +  +   P I+   V RILDL TG+G + +A     P       DIS +AL +A  N   
Sbjct: 122 NEFS---PWIDADKVHRILDLCTGSGCIAIACCYAFPEALVDATDISSEALAVAAINREQ 178

Query: 144 NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            GV ++   ++SD F+ V    +D+IV NPPY+    +  L  E R  +P ++L+ G +G
Sbjct: 179 LGVEDQLTLIESDCFTKVPQVHYDLIVCNPPYVGKEEMQTLPDEFR-HEPVLALETGNNG 237

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L+   +I      +L++ GL  VE+G N    +   +       +   +  GG+  V L 
Sbjct: 238 LTIVESILQNAHAYLSEHGLLIVEVG-NSDEALCEAYPHVPFTWLEMSQ--GGHG-VFLL 293

Query: 263 CR 264
            +
Sbjct: 294 TK 295


>gi|187477917|ref|YP_785941.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bordetella avium 197N]
 gi|115422503|emb|CAJ49028.1| putative adenine-specific methylase [Bordetella avium 197N]
          Length = 296

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 9/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ +  ++R  +   I R +        +      
Sbjct: 36  NAWDEAVYLVLHGLHLPPDSLDPFLDARVLSQERDRVLTLIDRRVAERVPAAYLTHEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R  +      PR     L+D  LA  +   E   V R LD+ TG+G + +      P
Sbjct: 96  RGHRFYVDQRVIVPRSPIAELLDQGLAPWV--AEPESVGRALDMCTGSGCLAILAALAFP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
           + +   VDIS  AL++A+ N     + +R    +S+ F  +    +DVIV NPPY+ S  
Sbjct: 154 YAEVDAVDISPDALDVAQRNVDEYRLQDRLRLHRSNLFDDLPAAAYDVIVCNPPYVNSQS 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R I     R+L+  G+  +EIG+  +      F
Sbjct: 214 MSELPAEYRA-EPALALAGGADGMDLVRRILQAAPRYLSPQGVLVLEIGHE-RDHFEAAF 271

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
              +   ++  +D    D++LL  R
Sbjct: 272 PELEPIWLDT-EDAS--DQILLLTR 293


>gi|227503859|ref|ZP_03933908.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940]
 gi|227199482|gb|EEI79530.1| rRNA or tRNA methylase [Corynebacterium striatum ATCC 6940]
          Length = 296

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 19/273 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G     + +D  + +             R    E +  ILG   F  + L
Sbjct: 28  DARLLAAELIGCGHMDIDLDA-APIPGFDIA-YEGWAARRAAREPLQHILGTAWFGPLEL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIE---------KRDVVRILDLGTGTGAVCLALL 116
            +    F PRPETE+L D  +       +              R++DL TG+GA+   + 
Sbjct: 86  EVGPGVFIPRPETEVLADWGVRMLRDVAKHTAPTALTVPASPPRVVDLCTGSGALAGYVK 145

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNP 172
            E P  +   V++S +A   A+ N            + D         ++G  D++++NP
Sbjct: 146 HEMPEAEVYAVELSDEAFSYAQRNLSRVAGEGLRLVQGDATAPATLRKLDGSVDLVLTNP 205

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+       L  EV   DP +++ GG DG++    +   ++  L   G   +E      
Sbjct: 206 PYVP--ETPDLEPEVY-HDPHMAVFGGEDGMAIINRLVPRIAELLKPGGRVGIEHDDATS 262

Query: 233 VDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             V  +  +      +   +D  G  R +   +
Sbjct: 263 AAVQAVLHADGRFTDIAVLRDLTGTARFVTARK 295


>gi|78048434|ref|YP_364609.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. vesicatoria str. 85-10]
 gi|325928891|ref|ZP_08190054.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
 gi|78036864|emb|CAJ24557.1| putative HemK-family S-adenosyl-methionine-dependent
           methyltransferase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325540752|gb|EGD12331.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Xanthomonas perforans 91-118]
          Length = 308

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLRSEKEQVLGLFERRITERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVTLLKSDLFNGLGGRQYDLIVTNPPYVTNEE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  +V++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|298292309|ref|YP_003694248.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Starkeya novella DSM 506]
 gi|296928820|gb|ADH89629.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Starkeya novella DSM 506]
          Length = 329

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 7/253 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
           +AL ++   +     L    +    D+ L   +R  L   I       +    +LG    
Sbjct: 50  EALDEAAFIVLESLHLPIDDLSPWLDAKLTGEERTRLAGLIDARCETRQPAAYLLGRTYI 109

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI---EKRDVVRILDLGTGTGAVCLALLK 117
             V          PR     L+ + LA   P     E   + R+LDL TG+G + +    
Sbjct: 110 QGVPFRSDKRAIVPRSFIGELLAAELAGGDPFALVPEPMAITRVLDLCTGSGCLAILAAM 169

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P  +   VD+S  AL +A  N   + + +R   ++ D F ++ G ++D+I++NPPY++
Sbjct: 170 IFPNAEVDAVDLSPDALALAAENVAEHEMGDRVRLVEGDLFEALAGEVYDLIITNPPYVD 229

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  E R  +P ++ DGG DGL   R I     +HL+  G    EIG   K  + 
Sbjct: 230 APAMAALPDEYR-HEPSLAFDGGPDGLDIVRRILTEAPKHLSAQGSLICEIGTG-KEILE 287

Query: 237 RIFESRKLFLVNA 249
             + +     ++ 
Sbjct: 288 AEYPNLPFLWLDT 300


>gi|220913096|ref|YP_002488405.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
 gi|219859974|gb|ACL40316.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
          Length = 288

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 14/262 (5%)

Query: 3   ALRDSHSFLCRVT--GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
              D+      +   GL   + ++  D+   +         +        +  I G   F
Sbjct: 26  PRVDAELLADHLLQVGLGRLRALMLGDTPAPE----GYDELVAERAGRVPLQHITGVAHF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             + L +    F PRPETE +V   +      +  +D  RI+DLGTG+GA+  ++  E P
Sbjct: 82  RYLELAVGPGVFIPRPETESVVQLVID----HVAGKDAPRIVDLGTGSGAIAGSIAHEVP 137

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   V+ S  A   A  N    GV      L++     + G FDV++SNPPYI +  +
Sbjct: 138 GAEVHAVEFSPLAHAWAARNLEPLGVRLVLGDLRTAL-PELNGTFDVVISNPPYIPAEAI 196

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                EV   DP  +L  GG DG+      A   +R L   G   +E    Q   +  + 
Sbjct: 197 PN-EPEVALHDPPEALYGGGADGMELPTAAAASAARLLRPGGYFVMEHAEVQAGWIAAML 255

Query: 240 ESRK-LFLVNAFKDYGGNDRVL 260
             +     ++   D  G +R  
Sbjct: 256 GRQGAWTGISTHVDLNGKERAT 277


>gi|313667968|ref|YP_004048252.1| adenine-specific methylase [Neisseria lactamica ST-640]
 gi|313005430|emb|CBN86865.1| hypothetical adenine-specific methylase [Neisseria lactamica
           020-06]
          Length = 303

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   ++  +   I R   +H     +      
Sbjct: 40  NAYDEAAYLILHTLNLPLDVLDPYLDARLLRAEKEKVLAVIERRAVEHIPAAYLTRQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VD+S  ALE+A  N    G+ ER   + +D F  + G +D+IVSNPPY+++  
Sbjct: 157 PDAHIDAVDVSLDALEVAGINIEDYGLEERIRLIHTDLFEGLAGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V+ L  E    +P ++L  G DGL   R I    ++ LN  G+  VEIG+N +  +   +
Sbjct: 217 VEALPEEYL-HEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHN-RDVLEAAY 274

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +      GG+  V L  R
Sbjct: 275 PELPFTWLET---SGGDGFVFLLTR 296


>gi|154249579|ref|YP_001410404.1| HemK family modification methylase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153515|gb|ABS60747.1| modification methylase, HemK family [Fervidobacterium nodosum
           Rt17-B1]
          Length = 258

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 26/262 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             R++   + +V   S   VI   +    ++        + + L    +  ILG  +F+ 
Sbjct: 16  PEREALILISKVLERSKEFVISHDELECPEQAI----ELLEKRLTGYPLQYILGEVEFFG 71

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  +      PR ETE LV+ A+      I K  + ++L++G G+G + + L  E+   
Sbjct: 72  RKFYIEEGVLIPRWETEGLVEIAIDL----IRKNGIKKVLEIGVGSGVILITLALET-GV 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVI 179
           +  G DI+ KA+E+ + N+    VS        ++       FD   +IVSNPPY+ +  
Sbjct: 127 ECYGTDINPKAIEVTRKNSQMYDVSCELKL--GEYAEPFIEKFDEFELIVSNPPYVRADA 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           V  L +EV  ++P  +L  G DGL  Y+   +   R+  +  +  +EIG +Q   + ++ 
Sbjct: 185 V--LPIEV-QYEPPDALFAGKDGLDFYKKFFE---RYNIQGKIVVMEIGEDQGEALRKL- 237

Query: 240 ESRKLFLVNAFKDYGGNDRVLL 261
                      KD  G DR L+
Sbjct: 238 -----TGGEILKDLAGKDRYLV 254


>gi|21243453|ref|NP_643035.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109008|gb|AAM37571.1| adenine-specific methylase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 308

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R + +      + G   F
Sbjct: 36  NALDEATQLVLHSLHLPHDLGPAYGQARLLRSEKEQVLGLFERRISERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD FS + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNITLLKSDLFSGLGGRQYDLIVTNPPYVTNEE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  +VR+ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|171059200|ref|YP_001791549.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Leptothrix cholodnii SP-6]
 gi|170776645|gb|ACB34784.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Leptothrix cholodnii SP-6]
          Length = 319

 Score =  196 bits (499), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 63/265 (23%), Positives = 104/265 (39%), Gaps = 7/265 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++        GLS        DS +       +   I   +   +    +      
Sbjct: 55  NARDEAAWLTMWKLGLSLDAYDEVADSPVSPANVAGVEAVIAERIASRKPAAYLTHEAWL 114

Query: 61  YNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             V   +      PR     L+ D      L         R+LDL TG G++ +      
Sbjct: 115 QGVPFYVDERCIVPRSFIAELLGDPQYGDMLDAWLSDQTRRVLDLCTGNGSLAVLAAMAY 174

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P     G D+S  AL++A+ N   + + ER   L SD   SV G +D+I+ NPPY+ +  
Sbjct: 175 PDVVVDGADLSHDALDVARINVQRHQLGERITLLHSDGLKSVNGPYDLILCNPPYVNAQS 234

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E +  +P ++L GG DG+   R +   + ++L   G+  +EIG+  +      F
Sbjct: 235 MAALPPEFKA-EPELALAGGADGMDFIRALLADLPKNLTPHGVLVLEIGHE-RAHFEAAF 292

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
                  +       G+D+VLL  R
Sbjct: 293 PRLPAIWLET---SAGSDQVLLLPR 314


>gi|289450591|ref|YP_003475654.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185138|gb|ADC91563.1| methyltransferase, HemK family [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 318

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 14/246 (5%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
              +     A+ R  + E    I G  +F        +    PR +TE+L ++A+A +  
Sbjct: 67  AELQKKFRAALRRRDEGEPWAYIWGQINFLGREFFTDTSVLIPRSDTEILWEAAVAGAKK 126

Query: 92  RIEKRDVV-RILDLGTGTGAVCLALLKESPFFKG-----VGVDISCKALEIAKSNAVTNG 145
             ++R    RIL+L TG+G + ++LL E           V  DIS  A+ + + N     
Sbjct: 127 IFQQRGRALRILELCTGSGCLIISLLNELAALNIPVELAVATDISAAAIRLVERNRQHLC 186

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                  L  D    VE    G FD  ++NPPY+       L  EVR+++PR++L   ID
Sbjct: 187 PDLPLVRLTGDLLEPVEAAGLGEFDFCLANPPYVTPAEYTALPDEVRNYEPRLALTDEID 246

Query: 202 GLSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           GL  YR I   V  +            VE G  Q+  +  + E+     V    DY G  
Sbjct: 247 GLDFYRRILHDVKLYGRNSKAAALYLWVEHGMTQRDAITEVAEAEGWLPVEYRDDYAGLP 306

Query: 258 RVLLFC 263
           RV  FC
Sbjct: 307 RVCGFC 312


>gi|288957889|ref|YP_003448230.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510]
 gi|288910197|dbj|BAI71686.1| adenine-specific DNA-methyltransferase [Azospirillum sp. B510]
          Length = 310

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 11/244 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFY 61
           A  ++   +     L   Q+    D+ L   +R  +   +   +   +    +L      
Sbjct: 42  AFDEAVFLVLETLHLPVDQLDPYIDARLTAAEREAVAGILHARIDTRKPAPYLLNKAYIQ 101

Query: 62  NVRLTLSSDTFEPRPETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +   +      PR     L+ S L          +   V R+LDL TG+G + +   + 
Sbjct: 102 GIPFYVDERVIVPRSYIGELLFSDLFGGDDFTIVEDPTSVERVLDLCTGSGCLAILAARI 161

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            P  +   VD+S  ALE+AK N   +G  +R    Q D F+ ++   +DVI++NPPY+++
Sbjct: 162 FPEAQVDAVDLSPDALEVAKRNVADSGFEDRITLHQGDLFAPLKTRKYDVIITNPPYVDA 221

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E R  +P ++L GG DGL   R I     +HL  +G    E G         
Sbjct: 222 EAMGALPPEFRA-EPEMALAGGDDGLDIVRRILKEAPKHLTPEGGLLCEFGTG-----RE 275

Query: 238 IFES 241
           I E+
Sbjct: 276 ILEA 279


>gi|294625088|ref|ZP_06703734.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666799|ref|ZP_06732033.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600597|gb|EFF44688.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292603460|gb|EFF46877.1| adenine-specific methylase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 308

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQLVLHGLHLPHDLGPAYGQARLLRSEKEQVLGLFERRITERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD FS + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVTLLKSDLFSGLGGRQYDLIVTNPPYVTNEE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  +VR+ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLVRLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|33519950|ref|NP_878782.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Blochmannia floridanus]
 gi|33504296|emb|CAD83188.1| predicted rRNA or tRNA methylase [Candidatus Blochmannia
           floridanus]
          Length = 303

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 14/244 (5%)

Query: 17  LSSHQVIVD-----PDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L S  + ++       + L  ++R  +   I +R  KH  +  +     F  +   + + 
Sbjct: 43  LPSLYLPLNIPTKIYHAKLSMKERSLIMKLINLRIQKHIPVPYLTNKAWFCGLEFYVDNR 102

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F PR     L+ S     L    K     +LDL TG+G + +A+    P  K    DIS
Sbjct: 103 VFIPRSPIGELILSNFHNLLSTPPKY----VLDLCTGSGCIAIAIATIYPKSKIDASDIS 158

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL++A+ N   + ++ +   + SD F+++    +D+I++NPPY+ ++++  L  E   
Sbjct: 159 IHALKVAEHNIQLHNLAHQILPIHSDLFNNIPLIKYDLIITNPPYVSNIVMRKLPKEFL- 217

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P ++L    +GL     I   ++ +LN +G+   E G + K  V++ + +      N 
Sbjct: 218 HEPTLALSANSNGLEIIHRILINITNYLNTNGILICETGIS-KNSVIQYYPNTPFHWFNF 276

Query: 250 -FKD 252
             KD
Sbjct: 277 NHKD 280


>gi|116668825|ref|YP_829758.1| HemK family modification methylase [Arthrobacter sp. FB24]
 gi|116608934|gb|ABK01658.1| modification methylase, HemK family [Arthrobacter sp. FB24]
          Length = 313

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 58/208 (27%), Positives = 87/208 (41%), Gaps = 1/208 (0%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L + I R +    +  ILGW +F  +R+ +++  F PR  T  LV  A    L      
Sbjct: 86  ELESMIERRVAGLPLEHILGWAEFCGLRIGVTAGVFVPRRRTGFLVRQA-ELLLRATHDG 144

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V R++DL  G+GAV  AL       +    D+   A+  AK N    G       L   
Sbjct: 145 GVPRVVDLCCGSGAVGAALAARVAGIELHAADLDPTAVLCAKGNIEPAGGHVHQGDLFEA 204

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G   V+V+N PY+ +  +  +  E R  +P +SLDGG DGL   R +  G    
Sbjct: 205 LPARLRGRITVLVANAPYVPTAAIGTMPPEARAHEPLMSLDGGPDGLDIQRRVIAGAPAW 264

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G   +E    Q    + +     L
Sbjct: 265 LAPGGHVLIETSRRQARRTIGLMRGAGL 292


>gi|15237618|ref|NP_201220.1| methylase family protein [Arabidopsis thaliana]
 gi|10176963|dbj|BAB10283.1| unnamed protein product [Arabidopsis thaliana]
 gi|15451004|gb|AAK96773.1| Unknown protein [Arabidopsis thaliana]
 gi|30725624|gb|AAP37834.1| At5g64156 [Arabidopsis thaliana]
 gi|332010464|gb|AED97847.1| RNA methyltransferase family protein [Arabidopsis thaliana]
          Length = 377

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 12/243 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
              + + L     R  K      ++G   + ++ L +      PRPETEL+VD      +
Sbjct: 137 SLEELYDLWR--QRIEKRRPFQYVVGCEHWRDLVLCVEEGVLIPRPETELIVDMV-EELV 193

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            R E        DLGTG+GA+ + + K      + +  D+S  A+ +A  N     +   
Sbjct: 194 TRDEWFKKDIWADLGTGSGAIAIGIAKVLGSRGRVIATDLSPVAIAVAGHNVQRYSLEGM 253

Query: 150 FDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  +  WF  +   EG    +VSNPPYI S  +  L  EV   +P+++LDGGIDG    
Sbjct: 254 IEVREGSWFEPLKDLEGKLVGLVSNPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSL 313

Query: 207 RTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRK----LFLVNAFKDYGGNDRVLL 261
             +  G SR L   G    E  G  Q   +V    +         +    D+ G +R + 
Sbjct: 314 FHLCHGASRMLQPGGFFVFETNGEKQSKMIVDYMMTSDLKDCFSDLKIVSDFAGINRFVT 373

Query: 262 FCR 264
             R
Sbjct: 374 GFR 376


>gi|171463263|ref|YP_001797376.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192801|gb|ACB43762.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 298

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 117/270 (43%), Gaps = 17/270 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDD-RQRFFLTNAIVRSLKHESIHRILGWRD 59
           + A  ++   + +   LS  + +   D  +   +Q+   T A  R    + +  ILG   
Sbjct: 34  VDAQSEALWIVSKQLDLSPAEALDHLDEAITAVQQQTASTVADTRISTRKPLAYILGEAW 93

Query: 60  FYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
              V    S  +  PR     L VD +L   LP        + LDL TG G++ + L   
Sbjct: 94  LMGVPFFCSEQSIVPRSWIAELIVDGSLESWLPAD-----GKALDLCTGNGSLAILLALS 148

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPP 173
            P       DIS  AL +A  N   +G++ + + L  D + ++     + LF++I+ NPP
Sbjct: 149 CPDIHVSACDISMPALSVAARNLDRHGLNTQVELLDGDLWDALPKPNEDNLFNLIICNPP 208

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  ++ L  E    +P ++L GG DG+   R I      +L++ G   +EIG N+  
Sbjct: 209 YVNANSMNALPAEYHA-EPALALAGGGDGMDLIRRILAQAPDYLSERGAILLEIG-NEYE 266

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +  + F           K   G+++VLL  
Sbjct: 267 NFKKAFPQIPAIW---MKVSAGDEQVLLIQ 293


>gi|302680659|ref|XP_003030011.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8]
 gi|300103702|gb|EFI95108.1| hypothetical protein SCHCODRAFT_57204 [Schizophyllum commune H4-8]
          Length = 292

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 74/278 (26%), Positives = 114/278 (41%), Gaps = 37/278 (13%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA ++        +G                     L N + R +  E +  ILG + F 
Sbjct: 21  QAAQELKWLRQHASG-----------------GHAPLQNLLARRVAGEPLQYILGSQPFG 63

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +T+      PRPETE            ++ +R  + + DLGTGTG + L L    P 
Sbjct: 64  DLEITVRPPVLIPRPETEDWTIRLSELLARKVRRRAPITLFDLGTGTGCIPLLLCHLLPQ 123

Query: 122 --FKGVGVDISCKALEIAKSNAV-------TNGVSERFDTLQSDWFS-------SVEGLF 165
              +  G D+S  A+ +A  NA         +G+   F    +D+ S       +     
Sbjct: 124 GTIRAHGFDLSPDAVALANENAKTSNIPAVASGLVNTFSATLADFASARFRADTAHALPC 183

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI--ADGVSRHLNKDGLC 223
           DV+ SNPPYI +     L  EV+D++   +L  G  GL  Y  I         L  DGL 
Sbjct: 184 DVLTSNPPYISTSEP--LPAEVKDWEDSRALFAGESGLQCYEAIGKLLASPGFLAPDGLV 241

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           ++EIG+ Q   V  I  S  L  +  ++D  G DR ++
Sbjct: 242 ALEIGHTQAQPVRDILASAGLREIEIWQDPWGKDRTVV 279


>gi|313886071|ref|ZP_07819809.1| methyltransferase, HemK family [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924601|gb|EFR35372.1| methyltransferase, HemK family [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 298

 Score =  196 bits (498), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 17/269 (6%)

Query: 7   SHSFLCRVTGLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           S   L  +T LS    ++D     L D +  +L  A+ R    E I  ILG   F +  L
Sbjct: 33  SEMLLQHITQLSQTNYLLDRKVRQLSDTEAVWLRQALERLAHDEPIQYILGVAPFGSFDL 92

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T+      PRPET  L +  L            +R+LD+G G+  + + +    P ++  
Sbjct: 93  TVGRGVLIPRPETAELCELILTR---HAATEAPLRLLDVGCGSACIPIYIGSHRPDWQLY 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--------FDVIVSNPPYIES 177
            +D S +AL  A  N    GV+     L+ D F    G          D++VSNPPYI  
Sbjct: 150 AMDQSEQALYYAAQNVRQTGVA--VQLLRGDLFDWSLGKSLPATLPPIDLLVSNPPYIPE 207

Query: 178 VIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQKVD 234
                +   V + +P+ +L     D L +YR +A  V +  +         E  +    +
Sbjct: 208 CDKATMRPNVLEGEPQEALFVPDADPLRYYRALAALVPQIRSSHAPLTLYCETHHKLAHE 267

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           +  + E           D  G +R +   
Sbjct: 268 IATLCERAGAISSEVLTDLTGRERFVQAT 296


>gi|323219316|gb|EGA03805.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. MB102109-0047]
          Length = 199

 Score =  195 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/186 (37%), Positives = 97/186 (52%), Gaps = 7/186 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
             RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F++
Sbjct: 20  PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREFWS 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ ALA            RILDLGTGTGA+ LAL  E P  
Sbjct: 80  LPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILDLGTGTGAIALALACERPDC 134

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++    
Sbjct: 135 EVTAVDRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPH 193

Query: 182 CLGLEV 187
               +V
Sbjct: 194 LSEGDV 199


>gi|57239542|ref|YP_180678.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579527|ref|YP_197739.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161621|emb|CAH58549.1| putative methyltransferase [Ehrlichia ruminantium str. Welgevonden]
 gi|58418153|emb|CAI27357.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase (hemK) [Ehrlichia ruminantium str. Welgevonden]
          Length = 280

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 5/261 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD    +  +  +    V+ DP   L+        + + +   +  I  I+G R+F+
Sbjct: 22  NPKRDVEVIIRHLMNVDGLIVVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++S   +PRP++E ++ +          K   + I D GTGTG +   LL     
Sbjct: 82  SMDFIVNSHVLDPRPDSESIISAVFTM---YPCKNRRLVIGDFGTGTGCLLTVLLSYYKL 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+ V+ + KA  +A  N   + V  R     S W +  E + D+IVSNPPYI    + 
Sbjct: 139 AVGIAVEKNVKAYRVAYQNFKNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIM 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+ ++P ++LDGG  GL +Y +I   + R L K+G+  +EIG +Q + +  I   
Sbjct: 198 TLQPEVKLYEPYVALDGGPVGLENYFSIFVVIKRCLKKNGVAVLEIGEDQ-LQIHHIICK 256

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L   +   D  G  R ++ 
Sbjct: 257 YGLKFHSYCYDLSGKKRCIII 277


>gi|86149778|ref|ZP_01068007.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85839596|gb|EAQ56856.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni CF93-6]
          Length = 271

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHE---PYFELIKRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 245 IVDFFKDEQGYNRAFIA 261


>gi|167586839|ref|ZP_02379227.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia ubonensis Bu]
          Length = 304

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/271 (23%), Positives = 108/271 (39%), Gaps = 16/271 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   + R   L    +    D+ L   +   +   I R          +      
Sbjct: 33  NAYDEAAYLVLRTLDLPLDTLEPFLDARLLPDEIDAVLTVIERRATERVPAAYLTHEAWM 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +      P
Sbjct: 93  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAILAASAFP 150

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
             +   VD+S KALE+A+ N    G+ +R    + D ++ +           +DVI++NP
Sbjct: 151 NAEIDAVDLSGKALEVAEINVRDYGLEDRISLHRGDLYAPLPLFRSSEPGARYDVILTNP 210

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I       L+ DG+  VEIG N++
Sbjct: 211 PYVNAASMAALPPEYR-HEPEMALAGGEDGMDVVRRIIGEARNWLHDDGVLVVEIG-NER 268

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             V   F       +       G D V L  
Sbjct: 269 EHVEAAF---GGLELTWLPTSAGEDSVFLIQ 296


>gi|121997613|ref|YP_001002400.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Halorhodospira halophila SL1]
 gi|121589018|gb|ABM61598.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Halorhodospira halophila SL1]
          Length = 306

 Score =  195 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 7/224 (3%)

Query: 30  LDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   + R ++    +  I     F  +   +      PR     L++     
Sbjct: 66  LTRSEREAVMARVRRRIEERLPLPYITHETFFAGLPFYIDQRVLVPRSPVAELIERGFQ- 124

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P ++   V R+L++GTG+G + +A     P       DI   ALE+A  N   + + E
Sbjct: 125 --PWVDPDAVERVLEIGTGSGCIAVACAYAFPGAAVDATDIDDDALEVAAVNVHRHDLEE 182

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +++D +  +    + +IV+NPPY+++  +  L  E R  +PR +L  G DGL   R
Sbjct: 183 RIALIRADVYEGLPQRRYQIIVTNPPYVDAAAMAALPPEYR-HEPRHALAAGEDGLDVVR 241

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            I  G    L  DGL  VE+G + +  V   F    L  V   +
Sbjct: 242 RILRGAPERLTDDGLLVVEVG-DSEDAVAEAFGHLPLTWVELER 284


>gi|284031474|ref|YP_003381405.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
 gi|283810767|gb|ADB32606.1| modification methylase, HemK family [Kribbella flavida DSM 17836]
          Length = 262

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 13/232 (5%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   + + +    +  ++GW +F  +R+ L +D F PR  TE LVD A+A        
Sbjct: 36  RQLAEMVEQRVAGRPLEHVVGWAEFRGLRVALDADVFVPRRRTEHLVDEAIA------RC 89

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++DL  G+GA+ LAL    P  +    D+   A++ A+ N    G       L +
Sbjct: 90  RPGAVVVDLCCGSGALGLALASAVPGTELSATDVHPAAVQNARRNLAPIGGQVFEGDLYA 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +++ G  D++++N PY+ S  V  L  E R  +P ++LDGG DGL   R +A   S 
Sbjct: 150 RLPTTLRGRVDLLLANVPYVPSDQVRLLPAEARLHEPLVTLDGGSDGLDLLRRVAAEASD 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV---LLFCR 264
            L   GL   E    Q    + +F    L  V         DR    ++  R
Sbjct: 210 WLVPGGLVVTETSNEQAAIAIDVFRRHGLSAVVT----TDADRFATTVVATR 257


>gi|219557201|ref|ZP_03536277.1| hypothetical protein MtubT1_07810 [Mycobacterium tuberculosis T17]
          Length = 267

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 15/255 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +       D       + +    +   +  ++G   F  
Sbjct: 22  ARCDAEQLAAHLAGTDRGRLPLF--EPPGDEFFGRYRDIVTARARRVPLQHLIGTVSFGP 79

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF- 121
           V L +    F PRPETE ++  A A SLP         I+D  TG+GA+ +AL +     
Sbjct: 80  VVLHVGPGVFVPRPETEAILAWATAQSLPA-----RPLIVDACTGSGALAVALAQHRANL 134

Query: 122 ---FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               + +G+D S  AL+ A+ NA    V   R D         ++G  D++VSNPPYI  
Sbjct: 135 GLKARIIGIDDSDCALDYARRNAAGTPVELVRADVTTPCLLPELDGQVDLMVSNPPYIPD 194

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V  L  EV   DP  +L GG DG++    +     R L   GL +VE         V 
Sbjct: 195 AAV--LEPEVAQHDPHHALFGGPDGMTVISAVVGLAGRWLRPGGLFAVEHDDTTSSSTVD 252

Query: 238 IFESRKLF-LVNAFK 251
           +  S KLF  V A K
Sbjct: 253 LVSSTKLFVDVQARK 267


>gi|304414084|ref|ZP_07395452.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
 gi|304283298|gb|EFL91694.1| N5-glutamine methyltransferase [Candidatus Regiella insecticola
           LSR1]
          Length = 357

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 11/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   I R + +   +  +     F      +      PR     L++   A 
Sbjct: 115 LTLSERRLIIERINRRVDERIPVAYLTHQAWFCGREYYVDERVLVPRSPIGELINKKFAT 174

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LPR  K     ILDL TG+G + +A            VDIS + L + + N   + V +
Sbjct: 175 LLPRTPK----HILDLCTGSGCIAIACAHAFAQADIDAVDISEEVLAVTEYNIQQHAVEQ 230

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   + SD F ++    +D+IV+NPPY+++  +  L  E   F+P++ L  G DGL   R
Sbjct: 231 QVTPILSDLFHALPPIQYDLIVTNPPYVDTEDMANLPPEF-CFEPKLGLAAGEDGLELVR 289

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I       L  DG+   E+G N  + ++R +       +       G D V +  +
Sbjct: 290 RILAWAPDFLQDDGVLICEVG-NSMMHLIRQYPDVAFTWLTFEH---GGDGVFMLTK 342


>gi|53719781|ref|YP_108767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei K96243]
 gi|53723897|ref|YP_103209.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei ATCC 23344]
 gi|121598261|ref|YP_993388.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei SAVP1]
 gi|124383464|ref|YP_001029176.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei NCTC 10229]
 gi|126448555|ref|YP_001080895.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia mallei NCTC 10247]
 gi|134277102|ref|ZP_01763817.1| methyltransferase, HemK family protein [Burkholderia pseudomallei
           305]
 gi|166999688|ref|ZP_02265523.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei PRL-20]
 gi|167739188|ref|ZP_02411962.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 14]
 gi|167816399|ref|ZP_02448079.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 91]
 gi|167824779|ref|ZP_02456250.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 9]
 gi|167894891|ref|ZP_02482293.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 7894]
 gi|167903279|ref|ZP_02490484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911520|ref|ZP_02498611.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 112]
 gi|167919529|ref|ZP_02506620.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei BCC215]
 gi|226198944|ref|ZP_03794507.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei Pakistan 9]
 gi|238563761|ref|ZP_00438331.2| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei GB8 horse 4]
 gi|254178103|ref|ZP_04884758.1| hemK family protein [Burkholderia mallei ATCC 10399]
 gi|254189307|ref|ZP_04895818.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur
           52237]
 gi|254197379|ref|ZP_04903801.1| methyltransferase, HemK family [Burkholderia pseudomallei S13]
 gi|254200162|ref|ZP_04906528.1| methyltransferase, HemK family protein [Burkholderia mallei FMH]
 gi|254206500|ref|ZP_04912852.1| methyltransferase, HemK family protein [Burkholderia mallei JHU]
 gi|52210195|emb|CAH36174.1| putative DNA methylase [Burkholderia pseudomallei K96243]
 gi|52427320|gb|AAU47913.1| hemK family protein [Burkholderia mallei ATCC 23344]
 gi|121227071|gb|ABM49589.1| hemK family protein [Burkholderia mallei SAVP1]
 gi|124291484|gb|ABN00753.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei NCTC 10229]
 gi|126241425|gb|ABO04518.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei NCTC 10247]
 gi|134250752|gb|EBA50831.1| methyltransferase, HemK family protein [Burkholderia pseudomallei
           305]
 gi|147749758|gb|EDK56832.1| methyltransferase, HemK family protein [Burkholderia mallei FMH]
 gi|147753943|gb|EDK61008.1| methyltransferase, HemK family protein [Burkholderia mallei JHU]
 gi|157936986|gb|EDO92656.1| methyltransferase, HemK family [Burkholderia pseudomallei Pasteur
           52237]
 gi|160699142|gb|EDP89112.1| hemK family protein [Burkholderia mallei ATCC 10399]
 gi|169654120|gb|EDS86813.1| methyltransferase, HemK family [Burkholderia pseudomallei S13]
 gi|225929044|gb|EEH25068.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei Pakistan 9]
 gi|238520025|gb|EEP83489.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei GB8 horse 4]
 gi|243064338|gb|EES46524.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia mallei PRL-20]
          Length = 307

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|149195280|ref|ZP_01872368.1| modification methylase, HemK family protein [Caminibacter
           mediatlanticus TB-2]
 gi|149134544|gb|EDM23032.1| modification methylase, HemK family protein [Caminibacter
           mediatlanticus TB-2]
          Length = 273

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 38/273 (13%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L ++       + ++ +  +             +  +   I  I    +FY  +  + 
Sbjct: 14  YILEKLLNKDKTWLFLNDELEVPSE----FFKIYEKVKRGYPIEYIFNEIEFYGKKYYVK 69

Query: 69  SDTFEPRPETELLVDSALAFSLPRIE---------------------KRDVVRILDLGTG 107
                PR +TE++V+ AL      ++                       + ++I+D  +G
Sbjct: 70  EGVLIPRDDTEVIVERALKLLDEELKVKSKKFKINDKLNVKNEKLEINNEKLKIVDCCSG 129

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +G + + + +  P  + V  DIS KA+E+AK NA  + V  +F   + + F       D+
Sbjct: 130 SGVIAITIKQYFPDIEVVATDISDKAIEVAKKNAKLHNVDIKFK--KCNLFDE---KGDI 184

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           ++SNPPY+E+        +  D++P I+  GG+DGL   R I         +     +EI
Sbjct: 185 LISNPPYVENSY-----PKPNDYEPDIAFYGGVDGLDIVREIILRAKNL--EYKYAIIEI 237

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           GYNQK ++ +  E  K+     FKD   N R +
Sbjct: 238 GYNQKENLSKFLED-KVKEYEFFKDLARNIRGV 269


>gi|58582885|ref|YP_201901.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624747|ref|YP_452119.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188577725|ref|YP_001914654.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58427479|gb|AAW76516.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84368687|dbj|BAE69845.1| adenine-specific methylase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188522177|gb|ACD60122.1| modification methylase, HemK family [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 308

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQMVLHTLHLPHDLGPAYGQARLLRSEKEQVLGLFERRITERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+  ++P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHDNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|58617581|ref|YP_196780.1| bifunctional methyltransferase HemK/tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase [Ehrlichia ruminantium str. Gardel]
 gi|58417193|emb|CAI28306.1| Bifunctional methyltransferase-hemK proteinhomolog and tRNA
           (guanine-N(7)-)-methyltransferase protoporphyrinogen
           oxidase (hemK) [Ehrlichia ruminantium str. Gardel]
          Length = 280

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 121/261 (46%), Gaps = 5/261 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              RD    +  +  +    V+ DP   L+        + + +   +  I  I+G R+F+
Sbjct: 22  NPKRDVEVIIRHLMNVDGLIVVKDPYISLNKTDTEIFWDMVKKRALNVPISHIIGKREFW 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   ++S   +PRP++E ++ +          K   + I D GTGTG +   LL     
Sbjct: 82  SMDFIVNSHVLDPRPDSESIISAVFTM---YPCKNRRLVIGDFGTGTGCLLTVLLSYYKL 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+ V+ + KA  +A  N   + V  R     S W +  E + D+IVSNPPYI    + 
Sbjct: 139 AVGIAVEKNVKAYRVAYQNFKNHKVYNRIKMRLSSWNTCYE-MCDLIVSNPPYIRRNKIM 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV+ ++P ++LDGG  GL +Y +I   + R L K+G+  +EIG +Q + +  I   
Sbjct: 198 TLQPEVKLYEPYVALDGGPVGLENYFSIFVVIKRCLKKNGVAVLEIGEDQ-LQIHHIVCK 256

Query: 242 RKLFLVNAFKDYGGNDRVLLF 262
             L   +   D  G  R ++ 
Sbjct: 257 YGLKFHSYCYDLSGKKRCIII 277


>gi|38233636|ref|NP_939403.1| HemK family methytransferase [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199896|emb|CAE49562.1| HemK-family methytransferase [Corynebacterium diphtheriae]
          Length = 272

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 100/263 (38%), Gaps = 14/263 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D H     +      ++ +  D  + +         + R    E +  IL    F  
Sbjct: 21  PRNDVHLMAAHLLNCQPMELFLKGDHDVPEN----FWEWVERRKNREPLQHILQVTWFGP 76

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+  +           ++DL TG+GA+   +  E P  
Sbjct: 77  LELHVGPGVFIPRPETEVLADWAVRHT------DSEDIVVDLCTGSGALAAYIAHEHPEC 130

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V++S  A+  A+ N        + D    +    + G  D++VSNPPY+   + + 
Sbjct: 131 SVWAVELSDAAMAFARRNLPDRVHLVQGDVTDPEILDHLSGAVDLLVSNPPYVP--LSND 188

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  EV   DP +++  G  G+     +   + R L   GL  +E          +     
Sbjct: 189 LEPEVYQ-DPSMAVFSGDSGMDTINAMIPVIYRLLAPGGLVGIEHDDLTSELTQQALIDH 247

Query: 243 -KLFLVNAFKDYGGNDRVLLFCR 264
                +   KD  G +R ++  +
Sbjct: 248 GGFSNIEPLKDLTGRNRFVVASK 270


>gi|88596994|ref|ZP_01100230.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562361|ref|YP_002344140.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|88190683|gb|EAQ94656.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112360067|emb|CAL34859.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 271

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIKIDHE---PYFELIKRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 245 IVDFFKDEQGYNRAFIA 261


>gi|148377996|ref|YP_001256872.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2]
 gi|148292042|emb|CAL59434.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae PG2]
          Length = 240

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 69/242 (28%), Positives = 108/242 (44%), Gaps = 18/242 (7%)

Query: 27  DSVLDDRQRFFLTNAI-----VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           D +L +++R+ L   +      +  +   I  I+G+ ++ NVR+ L+     PR ETE L
Sbjct: 5   DDLLLEKKRYGLELKVSSLELEKLNQGYPIQYIMGYVEYVNVRINLNHKVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V   L   L     +  +++LDL TG+G + +AL K          DI  +A+  A  N 
Sbjct: 65  VYILLNEHL-----KPGMKVLDLCTGSGFIGIALKKNLDSINVTLSDIDNEAIMQANENV 119

Query: 142 VTN-GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             N   +E    +QSD F  ++G FD+IVSNPPY++    D +   V+ F+P I+L    
Sbjct: 120 ALNFKDTEGIKVVQSDCFKDIKGKFDLIVSNPPYLDYDDKD-VDESVKKFEPEIALFAKD 178

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G   Y  I +    +LN  G+ + EI         +I            KD    DR  
Sbjct: 179 SGWYFYEKILNEAKIYLNVGGVLAFEINPKHIDRWKQI---NG---AKIVKDMSSKDRFA 232

Query: 261 LF 262
             
Sbjct: 233 FI 234


>gi|219685801|ref|ZP_03540610.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04]
 gi|219672634|gb|EED29664.1| putative protoporphyrinogen oxidase [Borrelia garinii Far04]
          Length = 273

 Score =  195 bits (496), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 8/242 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  R++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  IIANIKKSLTKREKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ AL     +I++    +ILDL  G+G + L++   +   K    DIS KAL+I + N 
Sbjct: 95  VEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYTKK-KVTLSDISIKALKIVEKNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               + +  + ++S+    ++  FD+I++NPPY+    ++         +P  +L G G 
Sbjct: 150 KKLKLEKFIEIIRSNLLKCIKERFDIIITNPPYLNKEELEI--KNKIKKEPAKALLGFGK 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL+  R I       LN +GL  +E    Q   +      ++   +    D     R L
Sbjct: 208 DGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKEFSHLKTIYDLEKRARAL 267

Query: 261 LF 262
           + 
Sbjct: 268 VL 269


>gi|289663180|ref|ZP_06484761.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 308

 Score =  195 bits (496), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQLVLHGLHLPHDLGPAYGQARLLRSEKEQVLGLFERRIAERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPHEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|289669402|ref|ZP_06490477.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 308

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQLVLHGLHLPHDLGPAYGQARLLRSEKEQVLGLFERRIAERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAAENKARLH-ADNVSLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|76809485|ref|YP_333989.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 1710b]
 gi|167720185|ref|ZP_02403421.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei DM98]
 gi|217421762|ref|ZP_03453266.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei
           576]
 gi|254179306|ref|ZP_04885905.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1655]
 gi|254259890|ref|ZP_04950944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1710a]
 gi|76578938|gb|ABA48413.1| hemK family protein [Burkholderia pseudomallei 1710b]
 gi|184209846|gb|EDU06889.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1655]
 gi|217395504|gb|EEC35522.1| ribosomal protein L3 N-methyltransferase [Burkholderia pseudomallei
           576]
 gi|254218579|gb|EET07963.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1710a]
          Length = 307

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLYAPLPQFKWIDPARRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|58698720|ref|ZP_00373607.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534756|gb|EAL58868.1| modification methylase, HemK family [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 229

 Score =  194 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 6/225 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
                  +  +   I +I+G R+F++    ++    +PRP++E L+ + L +      K+
Sbjct: 2   LFWKLTKKRAERYPISQIIGNREFWSKNFIVNQHVLDPRPDSETLISTVLKY---YPNKK 58

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             ++I D GTGTG + +++L E  +  GVG + S +A ++A  N   + +  R     S 
Sbjct: 59  QRLKIADFGTGTGCLLISVLSEYKYAVGVGFEKSLEAYKVAYQNTKKHDLLSRAKIFPSS 118

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           W      LFD+I+SNPPYI+   +  L  EV+  +P+ +LDGGIDGL+ Y +I   + R 
Sbjct: 119 WIE-CSDLFDLIISNPPYIKRSKLKDLQAEVQK-EPKTALDGGIDGLNCYLSIFPILRRC 176

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L K+G   +EIG +Q  ++ +I  S +L       D  G  R ++
Sbjct: 177 LKKNGFAILEIGEDQS-NIDKIIPSYELAFQEYVYDLAGMKRCIV 220


>gi|295394650|ref|ZP_06804869.1| protein-(glutamine-N5) methyltransferase [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972543|gb|EFG48399.1| protein-(glutamine-N5) methyltransferase [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 300

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 95/270 (35%), Gaps = 18/270 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVD--PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+ +       +S  ++       + +    +     A     +   +  I G   F  +
Sbjct: 26  DAKTLFAWAWDISVSELGSHVLRGTDVPREVKAQYARACESRAQRVPLQHITGVAPFRYL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +    F PRPETEL+V  A+          D    +DL TG+GA+ +AL  E P   
Sbjct: 86  EMHVGPGVFIPRPETELMVTYAIEHLAGL--PGDNHTAIDLCTGSGAIAIALATEVPRTH 143

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNPPYI 175
              V++S  A    + N      +  F+   SD    +             VI  NPPY+
Sbjct: 144 VHAVELSPDAALYTERNIERYRPT--FEAHGSDVIPHLGDATEFLGATSAQVITCNPPYV 201

Query: 176 ESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              +      EV + DP ++L GG  DG    + I     R L   GL   E        
Sbjct: 202 ARTVEHA--PEV-NSDPDLALYGGGKDGSELPQRIIAHAPRLLAPGGLFMCEHAEYNSRT 258

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           V   F       V    DY G DR     R
Sbjct: 259 VENAFHRAGFTNVETVGDYTGRDRFTRGYR 288


>gi|296082794|emb|CBI21799.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 9/226 (3%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  +      ++G   + ++ L++      PRPETE+ VD          +    +   
Sbjct: 25  QRIEERRPFQYVVGCEHWRDLVLSVQDGVLIPRPETEVFVDLVGDVVTQNGDLTQGL-WA 83

Query: 103 DLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           DLGTG+GA+ + + +   P  + +  D+S  A+ +A  N     + +  +  Q  WF  +
Sbjct: 84  DLGTGSGAIAIGIGRILGPRGRVIATDLSPVAVSVASFNVQRYSLQDIIEIRQGSWFEPL 143

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              EG    +VSNPPYI S  +  L  EV   +PR++LDGG+DG+     + +G +  L 
Sbjct: 144 KDVEGKLSGLVSNPPYIPSDHISGLQPEVGWHEPRLALDGGVDGIDALLHLCNGAASMLK 203

Query: 219 KDGLCSVEI-GYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVL 260
             G    E  G  Q   +V   E+      + V    D+ G  R +
Sbjct: 204 PGGFFIFETNGEKQCKFLVDYMENESKGNFYDVKIVPDFAGIQRFV 249


>gi|254389027|ref|ZP_05004257.1| modification methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294812516|ref|ZP_06771159.1| Putative methylase [Streptomyces clavuligerus ATCC 27064]
 gi|197702744|gb|EDY48556.1| modification methylase [Streptomyces clavuligerus ATCC 27064]
 gi|294325115|gb|EFG06758.1| Putative methylase [Streptomyces clavuligerus ATCC 27064]
          Length = 314

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 5/194 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R    E +  +LGW  F   R  +    F PRP +  LV+ A       +    
Sbjct: 52  LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERA-----LALAPGA 106

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL  E    +    DI   A+  A+ N    G +     L +  
Sbjct: 107 GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 166

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              + G  DV+++N PY+ +  +  L  E R  +  I+LDGG DGL   R +A    R L
Sbjct: 167 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 226

Query: 218 NKDGLCSVEIGYNQ 231
              G    E G  Q
Sbjct: 227 APGGSLLFETGERQ 240


>gi|167846309|ref|ZP_02471817.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei B7210]
          Length = 307

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG+DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGVDGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|284925978|gb|ADC28330.1| HemK family modification methylase [Campylobacter jejuni subsp.
           jejuni IA3902]
          Length = 271

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D    F L   I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKL---IRRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIILAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 245 IVDFFKDEQGYNRAFVA 261


>gi|315930593|gb|EFV09625.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 264

 Score =  194 bits (495), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 13  EAVFILCEYLKKDKAWLFLNQDIKIDHE---PYFELIKRFKSGEPFEYIFEKVDFWGLEF 69

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 70  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 124

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 125 ACDINPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 181

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 182 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 237

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 238 IVDFFKDEQGYNRAFIA 254


>gi|254358090|ref|ZP_04974363.1| methyltransferase, HemK family protein [Burkholderia mallei
           2002721280]
 gi|148027217|gb|EDK85238.1| methyltransferase, HemK family protein [Burkholderia mallei
           2002721280]
          Length = 307

 Score =  194 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   L   +   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQ--LYVEDPELVGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNYGLDERIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|308050332|ref|YP_003913898.1| (50S ribosomal protein L3P)-glutamine N5-methyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307632522|gb|ADN76824.1| (LSU ribosomal protein L3P)-glutamine N5-methyltransferase
           [Ferrimonas balearica DSM 9799]
          Length = 311

 Score =  194 bits (495), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 10/237 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   ++R ++    +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSTEKHRIVELVIRRVRERVPVPYLTNTAYFAGLEFYVDERVLVPRSPFAELIENDFK- 126

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P +  + V RILDL TG+  + +A        +   VDIS  ALE+A+ N   +G+ E
Sbjct: 127 --PWLYNKPVNRILDLCTGSACIAIACAYAFENAEVDAVDISDDALEVAQINIEQHGMLE 184

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +QSD F+++EG  +D+IVSNPPY+++  +  L  E    +P + L  G DGL   +
Sbjct: 185 RVFPIQSDGFTALEGQKYDLIVSNPPYVDAEDMGDLPEEF-HHEPELGLASGRDGLDLTK 243

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            I    + HL  DG+  VE+G N  V +   +       +   +   G D V L  R
Sbjct: 244 RILARAADHLTDDGILIVEVG-NSMVALAEQYPEVPFTWLEFER---GGDGVFLLTR 296


>gi|237812823|ref|YP_002897274.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei MSHR346]
 gi|237502756|gb|ACQ95074.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei MSHR346]
          Length = 307

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/254 (24%), Positives = 100/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N    G+ E+      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNYGLDEQIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|302518708|ref|ZP_07271050.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
 gi|302427603|gb|EFK99418.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. SPB78]
          Length = 302

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 102/247 (41%), Gaps = 19/247 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFF---LTNAIVRSLKHESIHRILGWRD 59
           A  ++   L  V           P+ V           L   + R +  E +  ++G   
Sbjct: 19  AEDEAELLLAAV-----------PEDVAGRDAAGRDGALDALVARRVAGEPLEHVVGHAV 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+ +R+ +    F PR  +E LV  AL      +     V +LDL  G+GA+ LAL    
Sbjct: 68  FHGLRIAVGPGVFVPRRRSEFLVARALD----GVRAEGAVTLLDLCCGSGALGLALRTAL 123

Query: 120 -PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P       D+   AL  A+ N    G       L +   +++ G  DV+ +N PY+ S 
Sbjct: 124 GPRATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAALRGRVDVLTANVPYVPSE 183

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V  L  E R  +P ++LDGG DGL   R +A+  +  L   G   VE G  Q  +V  I
Sbjct: 184 EVRLLPAEARAHEPLVALDGGTDGLDLVRRVAEEAATWLAPGGRLLVESGERQAPEVAGI 243

Query: 239 FESRKLF 245
           F +  L 
Sbjct: 244 FTAAGLH 250


>gi|226939724|ref|YP_002794797.1| adenine-specific methylase [Laribacter hongkongensis HLHK9]
 gi|226714650|gb|ACO73788.1| Probable adenine-specific methylase [Laribacter hongkongensis
           HLHK9]
          Length = 303

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 11/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   L     L   +     D  L   +R      I R + +      +      
Sbjct: 36  NAWDEAAYLLAHTLHLPLERFDALLDCRLLPTERDAALAVIERRVSERLPAAYLTHEAWL 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PR     L+  AL   +   E   V   LDL TG+G + +      P
Sbjct: 96  AGHDFYVDERVIVPRSFIAELLPEALEPWIEHPEL--VHSALDLCTGSGCLAILTALYYP 153

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 +D+S  ALE+A  N    G+ +R   ++SD ++ V GL +D+IVSNPPY+++  
Sbjct: 154 DADVDAIDLSPDALEVAGINVGRYGMQDRIRLVESDLWAGVAGLSYDLIVSNPPYVDAES 213

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI- 238
           V  L  E    +P ++L  G DGL   R I +  + HLN  G+  VEIG+N   DV+ + 
Sbjct: 214 VAALPDEYLK-EPELALGSGDDGLEATRRILEEAAAHLNPFGVLVVEIGHN--RDVLEMQ 270

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           +       +      GG+  V L  R
Sbjct: 271 YPQLPFTWLET---SGGDGFVFLLTR 293


>gi|316932711|ref|YP_004107693.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris DX-1]
 gi|315600425|gb|ADU42960.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris DX-1]
          Length = 337

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 6/249 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L   Q  +   + +  R+   +   I R +        ++     
Sbjct: 73  DPIAEAVFLVGEALHLHPDQFEMFASARVTAREAAAILGLIERRIATRVPAAYLVNKIYM 132

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
             V   +      PR     L+DS        +      V R+LDL TG+G + +     
Sbjct: 133 RGVPFYVDERVIVPRSFIGELLDSHFDGGDTSLIDTPEAVERVLDLCTGSGCLAILAAYA 192

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P      VD+S  AL +A  N   + + +R      D F  + +  +D+I+SNPPY+++
Sbjct: 193 FPNATVDAVDLSKDALAVATRNVAEHQLDDRVSLYHGDLFGPLGDERYDLIISNPPYVDA 252

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E R  +P ++ DGG DGL+  R I      HL  DG    E+G   +  +  
Sbjct: 253 DGMASLPAECRA-EPAMAFDGGDDGLTIIRRILTEAKNHLTPDGGLLCEVG-RCRPQIED 310

Query: 238 IFESRKLFL 246
            F    L  
Sbjct: 311 QFPQLPLLW 319


>gi|160872888|ref|ZP_02063020.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rickettsiella grylli]
 gi|159121687|gb|EDP47025.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rickettsiella grylli]
          Length = 314

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 6/224 (2%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  L   I + ++       ++    F  +   +      PR     L+ S L  
Sbjct: 75  LTLAERRLLIENIRQRVEERIPTAYLVNEAYFAGLAFYVDDRVLIPRSPIAELIQSELNP 134

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +   +K  +  ILDLGTG+G + +A     P  +   VD S  AL++A  N   +    
Sbjct: 135 WIENTKK--IHTILDLGTGSGCIAIACAYAFPEARVDAVDHSKDALKVAAVNVKIHKRQG 192

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           + + + SD+F +++   +D+I+SNPPY+++    CL LE R  +PR +L  G DGL    
Sbjct: 193 QINLIYSDFFQNLKRRRYDIIMSNPPYVDAEDFMCLPLEYR-HEPRAALAAGKDGLDGVI 251

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            I     ++L + G+  VE+G N K  +++ +     F +   +
Sbjct: 252 QILKEAKKYLKEKGILIVEVG-NSKNALIKRYPHIPFFWLEFEQ 294


>gi|166712636|ref|ZP_02243843.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 308

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +        + G   F
Sbjct: 36  NALDEATQMVLHTLHLPHDLGPAYGQARLLRSEKEQVLGLFERRITERVPAAYLTGEAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R+V R LDL TG+G + +A+   +P
Sbjct: 96  AGLSFKSDARALVPRSPIAELIEAGFE---PWLGGREVTRALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
            +   GVDIS  AL +A  N      ++    L+SD F+ + G  +D+IV+NPPY+ +  
Sbjct: 153 QWDVDGVDISDDALALAVENKARLH-ADNVTLLKSDLFTGLGGRQYDLIVTNPPYVTNDE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL     I     +HL++DGL   E+G +++  ++++ 
Sbjct: 212 TDALPQEY-SYEPELGLRAGDDGLDLVLKILRDAPQHLSEDGLLICEVGESEQ-HLIKLL 269

Query: 240 ESRKLFLVNA 249
               L  V  
Sbjct: 270 PEVDLAWVEF 279


>gi|238898679|ref|YP_002924360.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466438|gb|ACQ68212.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 311

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 6/189 (3%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  +     F      ++     PR      ++      L          ILD+ TG+G
Sbjct: 93  PVAYLTNTAWFCGQSYYVNEQVLIPRSPIGEFIEDHFYGLLSV----KPAHILDMCTGSG 148

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVI 168
            + +A  +  P  +   VDIS  AL +A+ N    G+  R   + SD F+ +    +D+I
Sbjct: 149 CIAIACAEAFPEAEVDAVDISRGALAVAECNIEQYGLENRVTPIYSDLFNDLPRITYDLI 208

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPPY+++  ++ L  E   F+PR+ L+ G DGL   + I     R L + G+   E+G
Sbjct: 209 VTNPPYVDAKDMNDLPPEFL-FEPRLGLEAGEDGLKLVQRILSSAGRFLKEKGVLICEVG 267

Query: 229 YNQKVDVVR 237
            +Q   + +
Sbjct: 268 NSQGSLIEK 276


>gi|187924448|ref|YP_001896090.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia phytofirmans PsJN]
 gi|187715642|gb|ACD16866.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia phytofirmans PsJN]
          Length = 294

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 9/236 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +   + N I R          I      +  R  +      PR     L+   L  
Sbjct: 60  LTAAEIDAVLNVIERRATERVPAAYITQEAWMHGFRFHVDERVIVPRSFIGELLQDGLQP 119

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +   E+  V  +L+L TG+G + +      P      VD+S  ALE+A  N     + +
Sbjct: 120 YVEDPEQ--VSAVLELCTGSGCLAILAAHAFPNADIDAVDLSAPALEVAARNVADYKLDD 177

Query: 149 RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R    + D ++ + E  +DVI+SNPPY+ +  +  L  E +  +P ++L GG+DG+   R
Sbjct: 178 RIALFEGDLYAPLAERRYDVIISNPPYVNAASMQDLPAEYK-HEPNMALAGGVDGMDIVR 236

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            I       L  +G+  VEIG N++  V   F    L  ++      G+D V L  
Sbjct: 237 RIIADARNWLTDEGVLVVEIG-NERQHVEAAFGGLDLVWLST---SAGDDNVFLIQ 288


>gi|269978101|ref|ZP_06185051.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris 28-1]
 gi|269933610|gb|EEZ90194.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris 28-1]
          Length = 330

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 101/305 (33%), Gaps = 55/305 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V            D  LD  Q       + +      +  ++G   F 
Sbjct: 27  NARMEASWLLQHVLEHPPLY-----DERLDAAQYQEFFALVGQRAHRVPLQHVMGEMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L      F  RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E   
Sbjct: 82  GLKLRARPGVFVVRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVAD 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------------- 161
                VDIS +A+ + + NA   G+  R     +     +                    
Sbjct: 142 TVLTSVDISPEAVALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAA 201

Query: 162 -------------------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                                       F VIV+NPPY+   +      E    DP  +L
Sbjct: 202 ATEGECQTEAAPHESENNGANETKATPKFHVIVTNPPYVIETVT---QPEAAA-DPPQAL 257

Query: 197 D-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             GG DGL   R   +  ++ L   G   +E G  Q   +V           +  KD  G
Sbjct: 258 YGGGTDGLDIPRRFLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHIEKDLAG 317

Query: 256 NDRVL 260
             R L
Sbjct: 318 RPRFL 322


>gi|308800168|ref|XP_003074865.1| HemK protein methyltransferase (IC) [Ostreococcus tauri]
 gi|116061414|emb|CAL52132.1| HemK protein methyltransferase (IC) [Ostreococcus tauri]
          Length = 394

 Score =  194 bits (494), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 22/255 (8%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L   +   L     R+++   +  +     + ++ LT+S     PRPETELL+D A    
Sbjct: 140 LSIEELEHLWR--KRTMERVPLQYLTHTAHWRDLELTVSDAVLIPRPETELLIDFAEEIL 197

Query: 90  LPRIEKRDVVR---------ILDLGTGTGAVCLALLKESPFF------KGVGVDISCKAL 134
                + D             LDLGTG+GA+ +A+ +             +  D S +A+
Sbjct: 198 NRLELQLDGTSTWNHLLSSPWLDLGTGSGALAIAMAQALQSRGRETVPLVLATDKSIEAV 257

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           E+AK NA T GV +    L   WF  ++    F  I+SNPPYI + ++  L  EV   +P
Sbjct: 258 EVAKHNATTCGVQDVIQVLNGSWFEPIDDSIRFAGILSNPPYIPTELLGSLQPEVYLHEP 317

Query: 193 RISLDGGID-GLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFES-RKLFLVNA 249
           R++LDGG+  GL H  +I   ++  L   GL ++E  G  Q   V R+ E  R    +  
Sbjct: 318 RLALDGGVSGGLLHITSICAKITDFLLPGGLFAIETHGAEQAKFVGRLLEQTRAFDDIRT 377

Query: 250 FKDYGGNDRVLLFCR 264
             DY G  R +   +
Sbjct: 378 RADYAGVCRFVTARK 392


>gi|290962666|ref|YP_003493848.1| methylase [Streptomyces scabiei 87.22]
 gi|260652192|emb|CBG75324.1| putative methylase [Streptomyces scabiei 87.22]
          Length = 258

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 92/242 (38%), Gaps = 24/242 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L                     R        + R +    +  +LGW +F  
Sbjct: 21  AEDEAELLLA------------------TARTADEAAAMVDRRVAGLPLELVLGWAEFAG 62

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+T+    F PR  TE LV+ ALA             ++DL  G+GAV  AL       
Sbjct: 63  LRITVEPGVFVPRRRTEFLVERALAAV------PGASVVVDLCCGSGAVGAALAVRLVGA 116

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DI   A+  A+ N   +        L +     + G  D++ +N PY+ +  V  
Sbjct: 117 ELHAADIDPVAVRCARRNIAPHDGHAHEGDLFAALPDRLRGRVDILAANVPYVPTGEVPF 176

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E RD +P ++LDGG DGL   R +A      L   G   VE    Q    +  F+  
Sbjct: 177 LPGEARDHEPLVALDGGADGLDVLRRVAAEAPAWLAPGGCLLVETSERQAPLALDAFQRA 236

Query: 243 KL 244
            L
Sbjct: 237 GL 238


>gi|157415009|ref|YP_001482265.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385973|gb|ABV52288.1| putative DNA methylase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747647|gb|ADN90917.1| Putative DNA methylase [Campylobacter jejuni subsp. jejuni M1]
 gi|315931924|gb|EFV10879.1| methyltransferase, HemK family protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 271

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHE---PYFELIKRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD    +R  + 
Sbjct: 245 IVDFFKDEQDYNRAFIA 261


>gi|115489544|ref|NP_001067259.1| Os12g0612500 [Oryza sativa Japonica Group]
 gi|77556587|gb|ABA99383.1| modification methylase, HemK family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113649766|dbj|BAF30278.1| Os12g0612500 [Oryza sativa Japonica Group]
          Length = 353

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           + L D +  +L +   R         ++G   + ++ + +      PRPETE +VD    
Sbjct: 117 APLGDLESLWLRHVRDRR----PFQYVVGNEHWRDLVVAVREGVLIPRPETEAVVDMV-- 170

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGV 146
               +++  +     DLGTG+GA+ +A+ +   P  +    D+S  A+++A+ N    G+
Sbjct: 171 ---AKVQGFEAGWWADLGTGSGAIAVAVARMLGPEGRVFATDVSEVAIDVARLNVQRYGM 227

Query: 147 SERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            ++ +     WF  +E   G    ++SNPPYI +  +  L  EV   +P+++LDGG DGL
Sbjct: 228 QDKVEIRHGSWFEPLEDLKGKLMGVISNPPYIPTEDLPGLQPEVGWHEPKLALDGGKDGL 287

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259
            H   + +G+S  L   G    E  G  Q   +V   +++       V A  D+    R 
Sbjct: 288 EHLLHLCEGLSSVLKPGGFFVFETNGNKQSEFLVDFIQTKWDSSFRDVEAVLDFADIKRF 347

Query: 260 LLFCR 264
           +   R
Sbjct: 348 VTGYR 352


>gi|306818472|ref|ZP_07452195.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|304648645|gb|EFM45947.1| protein-(glutamine-N5) methyltransferase [Mobiluncus mulieris ATCC
           35239]
          Length = 330

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 101/305 (33%), Gaps = 55/305 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V            D  LD  +       + +      +  ++G   F 
Sbjct: 27  NARMEASWLLQHVLEHPPLY-----DERLDAAKYQEFFALVGQRAHRVPLQHVMGEMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L      F  RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E   
Sbjct: 82  GLKLRARPGVFVVRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVAD 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------------- 161
                VDIS +A+ + + NA   G+  R     +     +                    
Sbjct: 142 TVLTSVDISPEAVALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAA 201

Query: 162 -------------------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                                       F VIV+NPPY+   +      E    DP  +L
Sbjct: 202 ATEGECQTEAAPHESENNGANETKATPKFHVIVTNPPYVIETVT---QPEAAA-DPPQAL 257

Query: 197 D-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             GG DGL   R   +  ++ L   G   +E G  Q   +V           +  KD  G
Sbjct: 258 YGGGTDGLDIPRRFLENAAKLLVSGGTVVMEHGETQGEALVVAARDLGFARAHIEKDLAG 317

Query: 256 NDRVL 260
             R L
Sbjct: 318 RPRFL 322


>gi|254297194|ref|ZP_04964647.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e]
 gi|157807674|gb|EDO84844.1| methyltransferase, HemK family [Burkholderia pseudomallei 406e]
          Length = 307

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDMLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N   +G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNDGLDERIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|256825642|ref|YP_003149602.1| methylase of HemK family [Kytococcus sedentarius DSM 20547]
 gi|256689035|gb|ACV06837.1| putative methylase of HemK family [Kytococcus sedentarius DSM
           20547]
          Length = 308

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 102/268 (38%), Gaps = 29/268 (10%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              L                   DD +R      + R    E +  + G   F  + L +
Sbjct: 47  RVLLGHAL-------------AGDDPRRERFEAGVQRREAREPLQHVTGTAWFAGLGLEV 93

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDV---VRILDLGTGTGAVCLALLKES----- 119
               F PRPETELLV+ A    L           V ++DL TG+GAV L L +       
Sbjct: 94  GPGVFVPRPETELLVELAAERVLALAGGAGPEAQVEVVDLCTGSGAVVLGLARRLADRAE 153

Query: 120 -----PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPP 173
                P      V+   +A E A+ N    GV+       + + F   EGL DV+VSNPP
Sbjct: 154 AGQAVPTATLRAVEQDPRAAEYAERNIEAVGVTVDLRVSDAREEFVDREGLVDVVVSNPP 213

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           Y+     + L  E R+ DPR +L GG  DGL     +A      L   G   +E   +Q 
Sbjct: 214 YVPEG-AEPLEPEAREHDPRQALYGGSADGLVLPVELARHARVLLRPGGWLLMEHDDSQG 272

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             + R  E      +    D  G  RV+
Sbjct: 273 ESLPRALEEIGFDQLADHLDLAGRPRVV 300


>gi|126439529|ref|YP_001059484.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 668]
 gi|126219022|gb|ABN82528.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 668]
          Length = 307

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 107/270 (39%), Gaps = 16/270 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNP 172
                 VD+S  AL +AK N   +G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNDGLDERIALYHGDLYAPLPQFKWIDPARRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIVGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +V   F   +L  +       G+D V L 
Sbjct: 271 ANVEAAFGGLELVWLPT---SAGDDSVFLI 297


>gi|293189724|ref|ZP_06608440.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus
           F0309]
 gi|292821314|gb|EFF80257.1| protein-(glutamine-N5) methyltransferase [Actinomyces odontolyticus
           F0309]
          Length = 303

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 10/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L      SS     D  + L++ Q   L +A+        +  I G   F  + L
Sbjct: 33  DLRELLEWACDASSQW---DLPAELNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 F  RPETE+L   A+  ++  + +    R++DL  G+GA+ LA+  E+   +  
Sbjct: 90  AARPGVFVVRPETEVLAGLAIDEAMAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVW 149

Query: 126 GVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            V+   +   +A  N    GV     ER D       + ++G+ DV+V+NPPY+ +  + 
Sbjct: 150 AVEKEAEPFALACQNRDAVGVPCLHLERGDATDPATLAHLDGMVDVVVTNPPYVPADEMP 209

Query: 182 CLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                    DP ++L GG  DG      +A      L   G+  +E   +Q+  +V I  
Sbjct: 210 TQPE--ASADPHVALYGGSPDGTEIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAA 267

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
              +  +    D  G  R L   
Sbjct: 268 QLGMTDIATLPDLAGRRRFLSAR 290


>gi|126453622|ref|YP_001066767.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia pseudomallei 1106a]
 gi|242317080|ref|ZP_04816096.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106b]
 gi|126227264|gb|ABN90804.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106a]
 gi|242140319|gb|EES26721.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Burkholderia pseudomallei 1106b]
          Length = 307

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R          +      
Sbjct: 35  NAFDEAVYLVLHTLHLPLDTLEPFLDARLAPDEIDAVLAVIERRATERVPAAYLTREAWM 94

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E   V  +L+L TG+G + +      P
Sbjct: 95  HGHRFYVDERVIVPRSFIGELLDDGLQPYVEDPEL--VGSVLELCTGSGCLAILAALAFP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSNP 172
                 VD+S  AL +AK N   +G+ ER      D ++ +           +DVI++NP
Sbjct: 153 NASVDAVDLSADALAVAKINRDNDGLDERIALYHGDLYAPLPQFKWIDPAQRYDVIIANP 212

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     R L  DG+  VEIG N++
Sbjct: 213 PYVNAGSMAELPAEYR-HEPEMALAGGADGMDIVRRIIGEARRWLQDDGVLVVEIG-NER 270

Query: 233 VDVVRIFESRKLFL 246
            +V   F   +L  
Sbjct: 271 ANVEAAFGGLELVW 284


>gi|87300984|ref|ZP_01083826.1| modification methylase, HemK family protein [Synechococcus sp. WH
           5701]
 gi|87284855|gb|EAQ76807.1| modification methylase, HemK family protein [Synechococcus sp. WH
           5701]
          Length = 334

 Score =  193 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 70/221 (31%), Positives = 107/221 (48%), Gaps = 4/221 (1%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGT 106
           H  +  ++G   +    L +S     PR ETE+L D ALA +L         +   DLGT
Sbjct: 96  HTPLQYLVGVCPWREFSLAVSPAVLIPRQETEVLADLALALALALPAPAHRPLTWADLGT 155

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EG 163
           G+G + LAL + +P  +G+ VD S +AL  A+ N    G+ +R       W+  +    G
Sbjct: 156 GSGCLALALARAAPKARGLAVDCSAQALAQAEINLEEAGLLDRVTLHLGQWWEPLRPHWG 215

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             D++VSNPPYI + ++  L   VR+ +P ++LDGG DGL   R +A G    L   G  
Sbjct: 216 GLDLVVSNPPYIPTAVLVELEPLVREHEPHLALDGGPDGLEAIRALASGAWAALAPGGWL 275

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            +E  ++Q   V  +  +  L  V + +D  G  R     R
Sbjct: 276 LLEHHHDQSHAVAELLLACGLVEVTSHRDLEGRWRFAQARR 316


>gi|125545368|gb|EAY91507.1| hypothetical protein OsI_13142 [Oryza sativa Indica Group]
          Length = 355

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/245 (25%), Positives = 112/245 (45%), Gaps = 17/245 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           + L D +  +L +   R         ++G   + ++ + +      PRPETE +VD    
Sbjct: 119 APLGDLESLWLRHVRDRR----PFQYVVGNEHWRDLVVAVREGVLIPRPETEAVVDMV-- 172

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGV 146
               +++  +     DLGTG+GA+ +A+ +   P  +    D+S  A+++A+ N    G+
Sbjct: 173 ---AKVQGFEAGWWADLGTGSGAIAVAVARMLGPEGRVFATDVSEVAIDVARLNVQRYGM 229

Query: 147 SERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            ++ +     WF  +E   G    ++SNPPYI +  +  L  EV   +P+++LDGG DGL
Sbjct: 230 QDKVEIRHGSWFEPLEDLKGKLMGVISNPPYIPTEDLPGLQPEVGWHEPKLALDGGKDGL 289

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259
            H   + +G+S  L   G    E  G  Q   +V   +++       V A  D+    R 
Sbjct: 290 EHLLHLCEGLSSVLKPGGFFVFETNGNKQSEFLVDFIQTKWDSSFRDVEAVLDFADIKRF 349

Query: 260 LLFCR 264
           +   R
Sbjct: 350 VTGYR 354


>gi|239787480|emb|CAX83951.1| Modification methylase, HemK family [uncultured bacterium]
          Length = 321

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/269 (22%), Positives = 105/269 (39%), Gaps = 14/269 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
               ++   +     +   +++      L  RQR  L   I    +    +  ++G   F
Sbjct: 42  DPRAEAECLVSYALSVPVERLVRYRRRPLTGRQRRRLAWLIALRTRRRLPLPYLVGEAFF 101

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLP---RIEKRDVVRILDLGTGTGAVCLALLK 117
                 +      PR     L+++ L  S      ++   + RILDLGTG+G + + L  
Sbjct: 102 AGRSFHVDRRVLIPRS----LIENILDDSEGLALWMDPERLGRILDLGTGSGCLAITLAL 157

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175
             P  +  G DI  +AL +A  N     +  +R   ++SD F ++    +D+IV+NPPY+
Sbjct: 158 AYPGARVDGSDICPRALAVADINRRRFRLGGDRLRLIRSDLFQNLPRECYDLIVANPPYV 217

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  L  E R  +P  +L  G  GL+    I    + HL   G    E+G   +  +
Sbjct: 218 APGEYASLPREYR-HEPGRALRAGEGGLALVAAILRQAADHLAPGGWLICEVGDRGQETL 276

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +       V+      G   V +  R
Sbjct: 277 LARWPDFPGEWVHFH---FGRSGVFVIDR 302


>gi|153951215|ref|YP_001398334.1| HemK family modification methylase [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152938661|gb|ABS43402.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 271

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          + R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIEIDHE---PYFELVRRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIILAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  +E  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIEENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD    +R  + 
Sbjct: 245 IVDFFKDEQDYNRAFIA 261


>gi|86151737|ref|ZP_01069951.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|86153286|ref|ZP_01071490.1| methylase of polypeptide chain release factor [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|121613646|ref|YP_001000418.1| HemK family modification methylase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005360|ref|ZP_02271118.1| modification methylase, HemK family protein [Campylobacter jejuni
           subsp. jejuni 81-176]
 gi|315124222|ref|YP_004066226.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841366|gb|EAQ58614.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|85843012|gb|EAQ60223.1| methylase of polypeptide chain release factor [Campylobacter jejuni
           subsp. jejuni HB93-13]
 gi|87249539|gb|EAQ72499.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|315017944|gb|ADT66037.1| modification methylase, HemK family [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 271

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHE---PYFELIRRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGVLIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD    +R  + 
Sbjct: 245 IVDFFKDEQDYNRAFIA 261


>gi|74317288|ref|YP_315028.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Thiobacillus denitrificans ATCC 25259]
 gi|74056783|gb|AAZ97223.1| modification methylase HemK [Thiobacillus denitrificans ATCC 25259]
          Length = 308

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 109/266 (40%), Gaps = 12/266 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
            A  ++   +     L   ++    D+ L   +   +   + R ++       +      
Sbjct: 37  NAFDEAAYLILHTLHLPLDRLEPFLDASLTHAESEQVRAMLERRVRERLPAAYLTREAWL 96

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   LA   P +E  D V  +LDL TG+G + +      
Sbjct: 97  AGHHFYVDERVIVPRSFIAELLQDQLA---PWVEDADAVEDVLDLCTGSGCLAVLAALAF 153

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P      VD+S  AL +A  N     +  R   ++SD F+++ G  +D+I+SNPPY+++ 
Sbjct: 154 PSADVDAVDLSQDALAVAARNVADYDLDARIALIESDLFATLGGRRYDLIISNPPYVDAA 213

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V  L  E R  +P ++L  G DGL   R I      HL   GL  VEIG+N +  +   
Sbjct: 214 AVAALPAEYRA-EPALALGSGEDGLDATRKILAAAGDHLKPGGLLVVEIGHN-RDALEAA 271

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
           + +     ++      G D+ +   R
Sbjct: 272 YPALPFTWLDTE----GGDQFVFMLR 293


>gi|238063045|ref|ZP_04607754.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
 gi|237884856|gb|EEP73684.1| modification methylase hemK [Micromonospora sp. ATCC 39149]
          Length = 267

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 11/227 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQR--FFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           +     R  G    +   D   +L +  R    L +   R +  E +  ILGW +F  +R
Sbjct: 9   ATVLRLRAAGCVFAE---DEARLLVEAARTPEELHDLTRRRVLGEPLEAILGWAEFCGLR 65

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           + + S  F PR  T  LV+ A+A + P         ++DL  GTGA+  A+    P  + 
Sbjct: 66  VIVESGVFVPRQRTTYLVEQAVAVTSP------GAVVVDLCCGTGAIGAAVAARVPGTRL 119

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              DI   ++  A+ N    G       L       + G  DV+V N PY+ +  +  + 
Sbjct: 120 YACDIEPASVRCARRNLEPIGGHVYEGDLYDALPGRLRGAVDVLVVNAPYVPTDEIAMMP 179

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            E R+ +P ++LDGG DG+  +R +A+G +R L   G   +E G +Q
Sbjct: 180 PEAREHEPLVALDGGFDGVEVHRRVAEGAARWLAPGGHLIIETGESQ 226


>gi|154509272|ref|ZP_02044914.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798906|gb|EDN81326.1| hypothetical protein ACTODO_01797 [Actinomyces odontolyticus ATCC
           17982]
          Length = 303

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 10/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L      SS     D  + L++ Q   L +A+        +  I G   F  + L
Sbjct: 33  DVRELLEWACDASSQW---DLPAELNEDQAEKLRSAVGERALRIPLQHITGRMFFRGLTL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 F  RPETE+L   A+  ++  + +    R++DL  G+GA+ LA+  E+   +  
Sbjct: 90  AARPGVFVVRPETEVLAGLAIDEAMAVVARHGEARVVDLCAGSGAIGLAVATETTCTEVW 149

Query: 126 GVDISCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            V+   +   +A  N    GV     ER D       + ++G+ DV+V+NPPY+ +  + 
Sbjct: 150 AVEKEAEPFALACQNRDAVGVPCLHLERGDATDPATLAHLDGMVDVVVTNPPYVPADEMP 209

Query: 182 CLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                    DP ++L GG  DG      +A      L   G+  +E   +Q+  +V I  
Sbjct: 210 TQPE--ASADPHVALYGGSPDGTEIPARVARRALTLLRPGGVLLMEHSPSQEEAMVAIAA 267

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
              +  +    D  G  R L   
Sbjct: 268 QLGMTDIATLPDLTGRRRFLSAR 290


>gi|224073134|ref|XP_002303988.1| predicted protein [Populus trichocarpa]
 gi|222841420|gb|EEE78967.1| predicted protein [Populus trichocarpa]
          Length = 360

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 9/230 (3%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  +      I+G   + ++ L++      PRPETEL+VD   + ++   ++       
Sbjct: 131 QRIEERRPFQYIVGCEHWRDLVLSVQEGVLIPRPETELIVDLV-SDAVSNNQELGQGLWA 189

Query: 103 DLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           D+GTG+GA+ + + K    + + +  D+S  A+ +A  N    G+    +  Q  WF  +
Sbjct: 190 DVGTGSGAIAIGISKILRSYGRVIATDLSPVAVSVAMFNVQRYGLQHVTEVRQGSWFEPL 249

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              EG    IVSNPPYI S  +  L  EV   +PR++LDGG  G+ +   + +G +  L 
Sbjct: 250 KDVEGQLVGIVSNPPYIPSDNISGLQAEVGRHEPRLALDGGASGIDYLLHLCNGAAAMLK 309

Query: 219 KDGLCSVEI-GYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRVLLFCR 264
             G  + E  G  Q   +V   ++        +N   D+ G  R +   R
Sbjct: 310 PGGFFAFETNGEKQCKFLVDYMQNDIAGSFCNLNIVSDFAGIQRFVTGFR 359


>gi|254786508|ref|YP_003073937.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Teredinibacter turnerae T7901]
 gi|237684513|gb|ACR11777.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Teredinibacter turnerae T7901]
          Length = 305

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 10/252 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
            A  +    +         ++ +  D+ L   ++  + +AI R +K +     I G   F
Sbjct: 36  NAWDECAVLVLWALAQPWERLELIYDTRLTVDEKKRVFHAIGRRIKEKVPAAYITGEAIF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +R  ++ +   PR     L+ + +          D   +LDL TG+G + +       
Sbjct: 96  GGLRFEVNENVLVPRSPIAELLLNGMHPWFQ----EDPASVLDLCTGSGCIGILAASVFQ 151

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIES 177
             +    DIS  AL +A  N   + + +R   ++SD F++   +   +D+I+SNPPY+++
Sbjct: 152 GSEVDISDISASALAVAARNIRNHELVDRVTAIESDLFNAPHFIGRKYDLILSNPPYVDA 211

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  +  E    +P + L  G DGLS  R I    S+HL ++GL  VE+G +    +  
Sbjct: 212 HDLSSMPAEYHA-EPVLGLAAGNDGLSLARRILRDASKHLTRNGLLVVEVGNSWA-ALEE 269

Query: 238 IFESRKLFLVNA 249
            +       +  
Sbjct: 270 AYPEVPFVWLEF 281


>gi|297172146|gb|ADI23127.1| methylase of polypeptide chain release factors [uncultured gamma
           proteobacterium HF0770_09E07]
          Length = 256

 Score =  193 bits (491), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 11/229 (4%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           F L   I        I  I+G  +FY     ++ D   PRPETE+LVD  +  +   +E 
Sbjct: 39  FSLDGVIQEIKNKRPIQYIIGEWNFYEGTYFVNKDVLIPRPETEILVDH-IKNNFSNLEN 97

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LDLGTG+G + + + K       +G DI  KAL++AK     N  + + + ++S
Sbjct: 98  -----VLDLGTGSGCIAIEISKLFESATILGSDICEKALKVAKK--NNNQSNNKVNFIKS 150

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +WFS +EG FD+IVSNPPYI              F+P+++L     GL   + I      
Sbjct: 151 NWFSDIEGQFDLIVSNPPYIPEGTKLEAST---LFEPKVALFSEETGLKDLKKIISEAIN 207

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +L  +G   +E G  Q  ++    +      +    D    +R +   +
Sbjct: 208 YLKINGALILEHGMGQSSELSSYMKKIGYKNIGILNDLKDINRFVYGYK 256


>gi|227875210|ref|ZP_03993352.1| possible polypeptide chain release factor methyltransferase
           [Mobiluncus mulieris ATCC 35243]
 gi|227844115|gb|EEJ54282.1| possible polypeptide chain release factor methyltransferase
           [Mobiluncus mulieris ATCC 35243]
          Length = 330

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 63/305 (20%), Positives = 101/305 (33%), Gaps = 55/305 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V            D  LD  +       + +      +  ++G   F 
Sbjct: 27  NARMEASWLLQHVLEHPPLY-----DERLDAAKYQEFFALVGQRAHRVPLQHVMGEMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L      F  RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E   
Sbjct: 82  GLKLRARPGVFVVRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVAD 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------------- 161
                VDIS +A+ + + NA   G+  R     +     +                    
Sbjct: 142 TVLTSVDISPEAVALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAA 201

Query: 162 -------------------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                                       F VIV+NPPY+   +      E    DP  +L
Sbjct: 202 ATEGECQTEAAPHESENNGANETKATPKFHVIVTNPPYVIETVT---QPEAAA-DPPQAL 257

Query: 197 D-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             GG DGL   R   +  ++ L   G   +E G  Q   +V           +  KD  G
Sbjct: 258 YGGGTDGLDIPRRFLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHTEKDLAG 317

Query: 256 NDRVL 260
             R L
Sbjct: 318 RPRFL 322


>gi|322378890|ref|ZP_08053307.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1]
 gi|322380384|ref|ZP_08054590.1| protoporphyrinogen oxidase [Helicobacter suis HS5]
 gi|321147174|gb|EFX41868.1| protoporphyrinogen oxidase [Helicobacter suis HS5]
 gi|321148700|gb|EFX43183.1| protoporphyrinogen oxidase (HemK) [Helicobacter suis HS1]
          Length = 269

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 101/250 (40%), Gaps = 11/250 (4%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
           G+    + +     LD          +    K   I  I     FY     +      PR
Sbjct: 28  GVDRVYLHIHAQEELDSFAFERFMRMVKTRAKGFPIEYITNEVSFYGRIFFVDERVLIPR 87

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PETE+LV  A       I+   +  ++++G G+G + ++L    P    +  DI+ +ALE
Sbjct: 88  PETEILVHQASEL----IQDYGIKNVVEVGIGSGVISVSLAMAHPKISILATDITMEALE 143

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A  N  T  +  R +  Q+     V+     ++VSNPPY+       L   VR ++P I
Sbjct: 144 VASVNISTFNLQNRINLFQTSLLEGVDIKARTLVVSNPPYVALDYP--LEDSVR-YEPEI 200

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L GG  G    + + D  +    +    + E+G+N K  +      +     N + DY 
Sbjct: 201 ALYGGEYGDEILKALIDQAAN--KRVKYLACEMGHNHKASLSEHLGLKGY-QANFYTDYS 257

Query: 255 GNDRVLLFCR 264
             DR  +  R
Sbjct: 258 DLDRGFVATR 267


>gi|71907353|ref|YP_284940.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dechloromonas aromatica RCB]
 gi|71846974|gb|AAZ46470.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 299

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 6/227 (2%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
             D+ L   +R  L +   R  +       +            +      PR     L+D
Sbjct: 60  FLDARLLPHEREVLLDIYRRRCEERLPAAYLTNEAWLGEHHFYVDDRVIVPRSFIAELLD 119

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L   +   +   +   LDL TG+G + +      P      VD+S  A+ +A+ N   
Sbjct: 120 DQLTPWID--DPWAIKSALDLCTGSGCLAILTALAFPNADVAAVDLSEHAIAVAERNVAD 177

Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            G+ +R + +QSD F S+EG  FD+IVSNPPY+ +  V  L  E    +P ++L  G DG
Sbjct: 178 YGLYDRIELIQSDAFKSLEGRKFDLIVSNPPYVNAESVAALPPEYL-HEPELALGSGEDG 236

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           L   R I     +HL  +GL  VEIG+N +  +   +       ++ 
Sbjct: 237 LDFTRIILREAKKHLTDNGLLIVEIGHN-RDALEAAYPKLPFTWLDT 282


>gi|325184917|emb|CCA19409.1| methylase subunit of polypeptide release factor puta [Albugo
           laibachii Nc14]
          Length = 334

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 79/293 (26%), Positives = 126/293 (43%), Gaps = 39/293 (13%)

Query: 6   DSHSFLCRVTG---LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           D+   L         SS+ + +  D  + D +     + I R  K E I  I G ++F++
Sbjct: 45  DAKILLANALCPAVTSSNSLFLQLDREVSDGENTNFLSFIRRRCKGEPIAYITGTKEFWS 104

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   + S+T  PR ++E+LV++          K   + ILD+GTG+G + L+ L E P  
Sbjct: 105 MEFRVDSNTLIPRADSEVLVEAI----TNEYPKDARLGILDIGTGSGCLLLSALSEYPRA 160

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF------------SSVEGLFDVIVS 170
            G+G+D+  KAL+IA+ NA  + + +R D ++ D              S     FDVI+ 
Sbjct: 161 WGLGIDVCSKALDIARENARHHSLEDRCDFMECDLRDISSFSREGLDESFPSAPFDVILF 220

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGID------GLSHYRTIADGVSRHLN------ 218
           NPPYI       +  EV  ++P ++L    +      GL+ Y  +   V R L       
Sbjct: 221 NPPYIPQSERFMVDEEVLIYEPHLALFPSSNDVNNDFGLNLYECLQRVVLRLLGNVHSAE 280

Query: 219 -----KDGLCSVEIGYN-QKVDVVRIFE--SRKLFLVNAFKDYGGNDRVLLFC 263
                +  +  +EIG   Q   V  +F     KL       D     R LLF 
Sbjct: 281 RSTTFRKQIACMEIGSQKQAEAVKALFAHLEPKLQFKKTLFDIENRHRGLLFT 333


>gi|285017772|ref|YP_003375483.1| adenine-specific methylase [Xanthomonas albilineans GPE PC73]
 gi|283472990|emb|CBA15495.1| putative adenine-specific methylase protein [Xanthomonas
           albilineans]
          Length = 312

 Score =  193 bits (490), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + +   ++  +     R +        + G   F
Sbjct: 40  NALDEATHLVLNALHLPHDLGPAYGSARVTTPEKAQVLALFERRIAERIPAAYLTGEAWF 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+++      P +  R V R LDL TG+G + +A+   +P
Sbjct: 100 AGLSFKSDARALVPRSPIAELIEAGFE---PWLAGRAVSRALDLCTGSGCIAIAMGHYNP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++   VDIS +AL +A  N     +++    ++SD F+ + G  +++IV+NPPY+    
Sbjct: 157 NWQVDAVDISDEALALAAENKQRL-LADNVALVKSDLFAGLGGRRYELIVTNPPYVTHAE 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E    +P + L  G DGL     I      HL++DGL   E+G +++  +V++ 
Sbjct: 216 TDALPPEYA-HEPELGLRAGEDGLDLALKILRDAPAHLSEDGLLICEVGESER-ALVQLL 273

Query: 240 ESRKLFLVNA 249
                  +  
Sbjct: 274 PEVDFAWIEF 283


>gi|307700840|ref|ZP_07637865.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris FB024-16]
 gi|307613835|gb|EFN93079.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mobiluncus mulieris FB024-16]
          Length = 330

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 64/305 (20%), Positives = 102/305 (33%), Gaps = 55/305 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V            D  LD  Q       + +      +  ++G   F 
Sbjct: 27  NARMEASWLLQHVLEHPPLY-----DEGLDAAQYQEFFALVGQRAHRVPLQHVMGEMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L      F  RPETE + ++ +  +     +    ++LDLG G+GA+ LA+  E   
Sbjct: 82  GLKLRARPGVFVVRPETEWVAEAGIETAQVWGAQGIPPQVLDLGCGSGALGLAVAAEVAD 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------------- 161
              + VDIS +A+ + + NA   G+  R     +     +                    
Sbjct: 142 TVLISVDISPEAVALTQENADLCGIKARVILADATDLGGLISALTADSRLAPHETDRKAA 201

Query: 162 -------------------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                                       F VIV+NPPY+   +      E    DP  +L
Sbjct: 202 ATEGECQTEAAPHESENNGANETKATPKFHVIVTNPPYVIETVT---QPEAAA-DPPQAL 257

Query: 197 D-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             GG DGL   R   +  ++ L   G   +E G  Q   +V           +  KD  G
Sbjct: 258 YGGGTDGLDIPRRFLENAAKLLVAGGTVVMEHGETQGEALVVAARDLGFGRAHIEKDLAG 317

Query: 256 NDRVL 260
             R L
Sbjct: 318 RPRFL 322


>gi|297161741|gb|ADI11453.1| HemK family modification methylase [Streptomyces bingchenggensis
           BCW-1]
          Length = 268

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 9/219 (4%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           V   R    L   + R +    +  +LGW +F+ +R+ +    F PR  TE LVD A+  
Sbjct: 33  VTTARTPDELATMVDRRVAGLPLEHVLGWAEFHGLRIAVDHGVFVPRRRTEYLVDQAVGL 92

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNG 145
           + P         ++DL  G+GAV  AL+         +    DI   A+  A+ N   + 
Sbjct: 93  ARP------GAVVVDLCCGSGAVGAALITALGADSPIELYAADIEPAAVRCARRNIPADK 146

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                  L     +++ G  DV+V+N PY+ +  +  L  E RD +PR++LDGG DGL  
Sbjct: 147 GRVYEGDLYEPLPAALRGRVDVLVANAPYVPTDAIRLLPPEARDHEPRVALDGGADGLDV 206

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            R +    ++ L  DG   +E    Q       F    L
Sbjct: 207 QRRVLAEAAQWLAPDGHLLIETSEGQAPRTADTFARHGL 245


>gi|254480651|ref|ZP_05093898.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine gamma proteobacterium HTCC2148]
 gi|214039234|gb|EEB79894.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [marine gamma proteobacterium HTCC2148]
          Length = 305

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 13/240 (5%)

Query: 17  LSSHQVIVDPDS-----VLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSD 70
           LS  Q+ VD D       +   Q   +   + R + +H  +  +LG   F  +  +    
Sbjct: 48  LSVAQLPVDTDDSALPHPVAALQAEEIHALLTRRIDQHMPLPYLLGRAWFAGLEFSCDRR 107

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L+   L    P         ILDL  G G + LA             D+ 
Sbjct: 108 AIIPRSPIAELI---LRDYQPWYYGPPPQTILDLCCGGGCIGLAAAHHG-QASVDLADLD 163

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             +L +AK N     +++R +  QSD F  + E  +D+I+SNPPY++S  +  +  E   
Sbjct: 164 ADSLALAKENRARLQLTDRVEIYQSDLFDELPEKRYDLILSNPPYVDSADLASMPAEY-H 222

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P +SL  G DGL+  R I    + +L++DGL  VE+G +    + +++       +  
Sbjct: 223 HEPELSLGSGPDGLALTRRILSQAANYLHEDGLLVVEVGNSW-ETLEQVYPLVPFTWLEF 281


>gi|261855214|ref|YP_003262497.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Halothiobacillus neapolitanus c2]
 gi|261835683|gb|ACX95450.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Halothiobacillus neapolitanus c2]
          Length = 326

 Score =  192 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 20/237 (8%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSV-----LDDRQRFFLTNAIVRS-LKHESIHRILGWRD 59
           ++   +     L S  + +D D++     L   +   +T  I R  L+H     +L    
Sbjct: 60  EAAWLV-----LDSLHLPLDLDAMHWSAKLTPGEITLVTGLIRRRCLEHIPTAYLLNRAW 114

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F      +      PR     L+                  ILD+GTG+G + +AL +  
Sbjct: 115 FMGQPYYVDERVLIPRSPFAELIAQHFEPWYGT--DTPPASILDIGTGSGCLAIALAQYF 172

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPP 173
           P       DIS  AL IA  N     + +R +  QSD   +++        FD+I+SNPP
Sbjct: 173 PEAMISACDISMDALSIAARNVRDYQLEDRVELYQSDLLDNLKDETDAPLRFDLIISNPP 232

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           Y++    + +  E    +P ++L     GL+    + D    HL+ DG   VE+G  
Sbjct: 233 YVDPAEAEDMPEEY-HHEPAMALYAPNQGLALVERMLDTAGEHLSPDGYLFVEVGNG 288


>gi|221632125|ref|YP_002521346.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159]
 gi|221156910|gb|ACM06037.1| methyltransferase, HemK family [Thermomicrobium roseum DSM 5159]
          Length = 283

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 107/264 (40%), Gaps = 17/264 (6%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVD-PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              D+   LC V G+   ++    P+      +R      + R  + E +  + G R+FY
Sbjct: 23  PRLDAEVLLCHVLGIDRAELYRRLPEQPPGTLER--FWELVARRERGEPVAYLTGHREFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----K 117
            +   ++ +T  PRPETE LV  A      R    D  R +D+GTG GA+ ++L     K
Sbjct: 81  GLDFLVTPETLIPRPETEFLVTWAAERLRAR---HDEPRCVDVGTGCGAIIVSLAVTLGK 137

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           + P    VG D S  AL++A+ N        R   +  D  S   G  D++V+N PY+  
Sbjct: 138 QHP-AVLVGSDRSLAALQVARVNRERL-APGRVHLVCGDLLSWCRGPLDLVVANLPYLRP 195

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                       ++P  +L    +G   Y  +   V+  L   G C VEI   Q    + 
Sbjct: 196 DQWHPG----LAWEPAEALFAPDEGFGWYARLLPQVATLLRSGGGCIVEIDPAQAERALS 251

Query: 238 IFESR-KLFLVNAFKDYGGNDRVL 260
              S      +   +D  G  R L
Sbjct: 252 TARSLFPHGKIAIRRDLAGLSRYL 275


>gi|91975757|ref|YP_568416.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisB5]
 gi|91682213|gb|ABE38515.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB5]
          Length = 330

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/252 (23%), Positives = 106/252 (42%), Gaps = 6/252 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L   Q  +   + +  R+   +   I R +        ++     
Sbjct: 66  DPIAEAVFLVGEALHLHPDQFEMFATARVTVREATAILGLIERRVATRLPAAYLVNKIYM 125

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
             V+  +      PR     L++S        +  +   V R+LDL TG+G + +   + 
Sbjct: 126 RGVQFYVDERVIVPRSYIGELLESHFDGGATSLIGDPEAVERVLDLCTGSGCLAILAARN 185

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P  +   VD+S  AL +A  N   +GV ER      + F+ + E  +D+I++NPPY+++
Sbjct: 186 FPHAEIDAVDLSKDALAVAAKNVADHGVGERLTLHHGNLFAPLGEARYDLIITNPPYVDA 245

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E R  +P ++ DGG DGL   R I D    HL  DG    E+G   +  +  
Sbjct: 246 EGMASLPAECRA-EPAMAFDGGDDGLDIIRRILDEAKDHLTPDGGLLCEVGRG-RALIEE 303

Query: 238 IFESRKLFLVNA 249
            F +  L  ++ 
Sbjct: 304 EFSNLPLLWLDT 315


>gi|192289768|ref|YP_001990373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris TIE-1]
 gi|192283517|gb|ACE99897.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Rhodopseudomonas palustris TIE-1]
          Length = 340

 Score =  192 bits (488), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 5/231 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
             + ++   +     L   Q  +   + +  R+   +   I R +        ++     
Sbjct: 76  DPIAEAVFLVGEALHLHPDQFEMFASARVTTREAAAILGLIERRIGSRLPAAYLVNKIYM 135

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
             V   +      PR     L+DS        +      + R+LDL TG+G + +     
Sbjct: 136 RGVPFYVDERVIVPRSYIGELLDSHFDGGDTSLIDAPEAIERVLDLCTGSGCLAILAAYA 195

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P      VD+S  AL +A  N   + + +R      D F  + +  +D+I++NPPY+++
Sbjct: 196 FPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHGDLFDPLGDERYDLIITNPPYVDA 255

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  L  E R  +P ++ DGG DGL+  R I      HLN DG    E+G
Sbjct: 256 DGMASLPAECRA-EPAMAFDGGDDGLTIIRRILAEAKDHLNPDGGLLCEVG 305


>gi|326441030|ref|ZP_08215764.1| putative methylase [Streptomyces clavuligerus ATCC 27064]
          Length = 289

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 5/194 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R    E +  +LGW  F   R  +    F PRP +  LV+ A       +    
Sbjct: 27  LTELVARRGSGEPLEHVLGWAAFRGGRFAVDPGVFVPRPRSAFLVERA-----LALAPGA 81

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL  E    +    DI   A+  A+ N    G +     L +  
Sbjct: 82  GAVVVDLCCGSGALGAALTAELGGAELHAADIDPAAVRCARRNVRALGGTVYEGDLCAPL 141

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              + G  DV+++N PY+ +  +  L  E R  +  I+LDGG DGL   R +A    R L
Sbjct: 142 PDRLRGRVDVLLANVPYVPTGEIALLPAEARVHEAAIALDGGTDGLDVLRRVAAEAGRWL 201

Query: 218 NKDGLCSVEIGYNQ 231
              G    E G  Q
Sbjct: 202 APGGSLLFETGERQ 215


>gi|209886321|ref|YP_002290178.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209874517|gb|ACI94313.1| protein-(glutamine-N5) methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 324

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 7/253 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L   Q      + +   +   L   I + ++  +    +L     
Sbjct: 58  DPVAEAVFLVTGALHLEPEQFDGFAQARVTRTEAAKLLGLIEQRVRTRKPAAYLLNKIYM 117

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI---EKRDVVRILDLGTGTGAVCLALLK 117
             +   +      PR     ++D+  +         +   V R+LDL TG+G + +   +
Sbjct: 118 RGLPFYVDERVIVPRSFIGEILDTHFSGESEMPLIDDPGSVSRVLDLCTGSGCLAILAAQ 177

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
                    VDIS  AL +A  N    G+ +R    + + F+ + +  +D+I+SNPPY++
Sbjct: 178 TFYNASVEAVDISKDALAVAAKNVADYGLEDRIALHRGNLFAPLGDARYDLIISNPPYVD 237

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  E R  +P+++ DGG DG+   R I      HL   G    E+G   +  V 
Sbjct: 238 AEGMSSLPPECR-HEPKLAFDGGRDGIDIVRRIVSEAGAHLTPQGGLLCEVG-RCREAVE 295

Query: 237 RIFESRKLFLVNA 249
             F    L  ++ 
Sbjct: 296 DAFPMLPLLWLDT 308


>gi|296138964|ref|YP_003646207.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
 gi|296027098|gb|ADG77868.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
          Length = 280

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 23/270 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L  V G+   ++++   + +D  Q       + R    E +  ILG   F  
Sbjct: 22  PRNDAEVLLAHVLGVDRGRLVI---ADVDAAQAGEYEALVARRADREPLQHILGRAPFGP 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETELL   A        +      I+DL  G+GA+ L L    P  
Sbjct: 79  LDLRVGPGVFVPRPETELLAVWA------ARQVGRGAAIVDLCAGSGALGLYLAATVPAA 132

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---------WFSSVEGLFDVIVSNPP 173
           +   V+    AL     NA   G++ R   L  D           +++ G  D++V NPP
Sbjct: 133 RVALVERDPHALGYLNDNAA--GLAGRVTVLDRDVTAVGLDAEIEAALGGTVDLVVCNPP 190

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+       +   +   DP  +L  G DGL   R++A   +R L   G  ++E   +   
Sbjct: 191 YVPDGAPLDVEAAL---DPAAALFSGPDGLDLIRSLAPLCTRLLRTGGAVAIEHDDSNGA 247

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
               +  +     V   +D  G  R +   
Sbjct: 248 AAAELLAAAGFRDVEQHRDLAGRPRYVTGR 277


>gi|111021210|ref|YP_704182.1| site-specific DNA-methyltransferase (adenine-specific) [Rhodococcus
           jostii RHA1]
 gi|110820740|gb|ABG96024.1| possible site-specific DNA-methyltransferase (adenine-specific)
           [Rhodococcus jostii RHA1]
          Length = 262

 Score =  191 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 7/208 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L + + R +    +  +LGW +F  +R+ +    F PR  T  LV+ A A + P     
Sbjct: 41  ELASMLDRRVAGVPLEHVLGWAEFCGLRIAVDPRVFVPRRRTAFLVEQAAALAGPH---- 96

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + DL  G+GAV  AL +     +   VDI   A+  A+ N    G     D  +  
Sbjct: 97  --AVVADLCCGSGAVGAALAETGDGIELYAVDIDPAAVRCARRNVPDPGRVFEGDLYEP- 153

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +++ G  DV+V+N PY+ +  +  +  E R  +PR+SLDGG DGL   R +  G    
Sbjct: 154 LPTALRGGIDVLVANAPYVPTDAIRLMPPEARFHEPRVSLDGGADGLDIQRRMTLGARDW 213

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G   +E    Q       F    L
Sbjct: 214 LAPGGHLLIETSAGQAPLTAEAFADAGL 241


>gi|90409142|ref|ZP_01217261.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3]
 gi|90309750|gb|EAS37916.1| ribosomal protein L3P methyltransferase [Psychromonas sp. CNPT3]
          Length = 302

 Score =  191 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 7/232 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL D+ S +     L  +  I    + L  R+R  L   +++ ++    +  +     F
Sbjct: 40  NALDDARSLIFATFKLPLYSDIEFNHARLTRREREKLVALVIKRIELRIPVAYLTNSAWF 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +   T  PR     L+++     L         RILDL TG+  + +A     P
Sbjct: 100 AGLEFYVDERTLVPRSPFAELIENGFKPWLTT----SPERILDLCTGSACIAIACAYAFP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                 VDIS  AL++A+ N   +GV ++   + SD FS +E   +D+IVSNPPY+++  
Sbjct: 156 DAYVDAVDISEDALDVAEINIQGHGVEQQVIPMLSDLFSGIENEKYDLIVSNPPYVDNED 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           +  L  E +  +P + L  G DGL   R +    +  LN +GL  VE+G +Q
Sbjct: 216 MQNLPAEFK-HEPELGLASGFDGLDLVRKMLAQAADMLNDNGLLFVEVGNSQ 266


>gi|327399627|ref|YP_004340496.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hippea maritima DSM 10411]
 gi|327182256|gb|AEA34437.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Hippea maritima DSM 10411]
          Length = 266

 Score =  191 bits (487), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 17/257 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L          V+ +P   L+DRQ   +     +      +  I   ++FY +  
Sbjct: 25  DALLILKDTIKKDDVYVLTNPQKELNDRQIEEIERLTNKRKLRYPMAYITHSKEFYGLEF 84

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PRPETEL+VD  L  +          +I+D+GTG+G + + L K        
Sbjct: 85  YVDDRVLIPRPETELIVDVTLKIA----SDIKNPKIVDIGTGSGCIAITLSKLL-DTHIT 139

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DIS +AL +AK NA           + ++    ++   D+I +NPPY+     + L  
Sbjct: 140 ASDISKEALNVAKLNAKRLDAD--ISLINANGLDFLKNGIDIITTNPPYVLENEYELLSE 197

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +V+ F+P+I+L     G      + +   +         +EIG +Q    ++I ++ +  
Sbjct: 198 DVK-FEPKIALIP-PSGNGFIEDLIEKAKQLTK---WLIMEIGPSQ----LKIIKNSRY- 247

Query: 246 LVNAFKDYGGNDRVLLF 262
           +    +D+   +RV +F
Sbjct: 248 IYKIIRDFSNKERVAVF 264


>gi|186939583|dbj|BAG31010.1| putative methylase [Bosea sp. AJ110407]
          Length = 330

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 6/232 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   L     L    +    D+ L   +R  L + I   +   +    ++G    
Sbjct: 64  NALDEAAFLLLEALKLPVDDINPWLDARLTRSERARLLDLIEARITTRKPAPYLVGRAYI 123

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLGTGTGAVCLALLK 117
           + +   +      PR     L+   +  +       E   V R+LDL TG+  + +    
Sbjct: 124 HGLGFRVDERVIVPRSYIGELLMRGVLEAEGLGLVPEPEAVDRVLDLCTGSACLAIIAAG 183

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P  +   V++S  AL++A+ N     + +R    Q D F  ++G  +D+I++NPPY+ 
Sbjct: 184 RFPNAEVDAVELSPDALDVARLNVADYDLDDRVHLFQGDLFVPLDGQRYDLIIANPPYVT 243

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +  V     E    +P+++   G DGL     I      HLN  G    E+G
Sbjct: 244 AEEVAAFPPEYAS-EPQMAHIAGNDGLDLVHRILAQARNHLNPGGGLLCEVG 294


>gi|57237024|ref|YP_178826.1| HemK family modification methylase [Campylobacter jejuni RM1221]
 gi|57165828|gb|AAW34607.1| modification methylase, HemK family [Campylobacter jejuni RM1221]
 gi|315058185|gb|ADT72514.1| Methylase, HemK [Campylobacter jejuni subsp. jejuni S3]
          Length = 271

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D    F L   I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIQIDHEPYFKL---IRRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIILAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINLKALELALENAKLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            V+  +P+ +L GG  G      I         K    + E GY+QK  + +I       
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIHFSLD--KKVKFLACEFGYDQKEILEKILYQNNF- 244

Query: 246 LVNAFKDYGGNDRVLLF 262
           +V+ FKD  G +R  + 
Sbjct: 245 IVDFFKDEQGYNRAFVA 261


>gi|114563834|ref|YP_751347.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Shewanella frigidimarina NCIMB 400]
 gi|114335127|gb|ABI72509.1| modification methylase, HemK family protein [Shewanella
           frigidimarina NCIMB 400]
          Length = 314

 Score =  191 bits (486), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 11/238 (4%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   ++  +   I+R ++    +  +     F  +   +      PR     ++++  + 
Sbjct: 68  LTSSEKHKIVELIIRRVRERLPVPYLTNKAKFAGLEFYVDERVLVPRSPIAEMINNQFS- 126

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P +  + V RILDL TG+  + +A        +   +DIS  ALE+A+ N  + GV +
Sbjct: 127 --PWLYNKPVNRILDLCTGSACIAIACAYAFEDAEVDALDISEDALEVAQINIESLGVLD 184

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R   +QSD FS++     +D+IVSNPPY+++  +  +  E    +P I L  G DGL   
Sbjct: 185 RVFPMQSDLFSAIPKGQHYDLIVSNPPYVDAQDIGDMPDEY-HHEPAIGLASGNDGLDLT 243

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           + I    + +L + GL  VE+G N  V ++  +       V+      G D V +  R
Sbjct: 244 KRILANAADYLTETGLLVVEVG-NSMVHLIEQYPDMPFTWVDFE---FGGDGVFVLTR 297


>gi|330817452|ref|YP_004361157.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia gladioli BSR3]
 gi|327369845|gb|AEA61201.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia gladioli BSR3]
          Length = 312

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   + R ++       +      
Sbjct: 41  NAYDEAVYLVLHTLHLPLDTLAPFLDARLLPEEIEAVLAQLERRVEERLPAAYLTNEAWM 100

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   +   V  +L+L TG+G + +   +  P
Sbjct: 101 HGHRFYVDERVIVPRSFIGELLDDGLQPYV--ADPEQVGAVLELCTGSGCLAVLAAEAFP 158

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--------EGLFDVIVSNP 172
             +   VD+S  ALE+A+ N    G+  R      D ++ +        E  +DVI+SNP
Sbjct: 159 HAEIDAVDLSEDALEVAEINISDYGLDHRIALHHGDLYAPLPSERLADPELRYDVILSNP 218

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     + L +DG+  VEIG N++
Sbjct: 219 PYVNADSMAALPDEYR-HEPEMALAGGDDGMDIVRRILREAKKWLKEDGVLVVEIG-NER 276

Query: 233 VDVVRIFESRKLFL 246
            +V   F    L  
Sbjct: 277 HNVEAAFGGLDLIW 290


>gi|241765979|ref|ZP_04763903.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
 gi|241364048|gb|EER59288.1| modification methylase, HemK family [Acidovorax delafieldii 2AN]
          Length = 309

 Score =  191 bits (486), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 107/269 (39%), Gaps = 14/269 (5%)

Query: 2   QALRDSHSFLCRVTGLSS-HQVIVDPD----SVLDDRQRFFLTNAIVRSLK-HESIHRIL 55
            A  ++   +    GL     +   PD      +       +       +   +    + 
Sbjct: 40  NARDEAAWLVLWRLGLPLDSDLDDGPDSIANQPVAHGALAQVATLFEERIHSRKPAAYLT 99

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                  +   +      PR     L+   +  S+         R+LDL TG G++ +  
Sbjct: 100 REAWLQGIPFYVDERAIVPRSFIAELL---VDGSIDDFLGEHTRRVLDLCTGNGSLAVLA 156

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               P  +  G DIS  ALE+A+ N   +G+  R     SD  + + G +D+I+ NPPY+
Sbjct: 157 AMAWPEVEVTGADISPDALEVARINVDRHGLQARITLQLSDGLAQLPGPWDLIICNPPYV 216

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +  +  L  E    +P ++L GG DG+   R +       ++++ +  +EIG N++   
Sbjct: 217 NADSMSRLPAEYLA-EPALALAGGTDGMDFVRRLLQDAPSRMSENAVLVLEIG-NERPYF 274

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              F    ++ V+      G+D+VL+  R
Sbjct: 275 EAAFGQLPVYWVDT---SAGDDQVLVVTR 300


>gi|294340442|emb|CAZ88823.1| putative Site-specific DNA-methyltransferase (adenine-specific)
           [Thiomonas sp. 3As]
          Length = 316

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 15/256 (5%)

Query: 3   ALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
           A  ++   +    GL +             L  +Q   +     + +   + +  +LG  
Sbjct: 42  AEDEAAWLVLHAAGLPASEAGDFATYAHQSLTAQQALQIETVTAQRIATRQPLAYLLGEA 101

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDS-ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
               +R  +      PR     L+D  AL   L         R+LD+ TG+G + +    
Sbjct: 102 WLVGLRFVVDPRVIVPRSFIAELLDEGALDPWL----TEPPHRVLDMCTGSGCLAILAAL 157

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
                +   VD+S  AL +A+ N     +  R   + SD ++S+       +D+++ NPP
Sbjct: 158 VWDDAQVDAVDLSADALAVAEINREAYALQHRLRLVASDLWASLAAAPSQAYDLVLCNPP 217

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R        HL+  G+  +E+G N++ 
Sbjct: 218 YVPTASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDAPAHLSARGIVVLEVG-NERA 275

Query: 234 DVVRIFESRKLFLVNA 249
                F +     +  
Sbjct: 276 AFEAAFPTLPAIWLET 291


>gi|321253120|ref|XP_003192636.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus
           gattii WM276]
 gi|317459105|gb|ADV20849.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Cryptococcus gattii WM276]
          Length = 343

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 31/287 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  +    +  V  + +++++      L   +   +   + R    E +  ILG  DF 
Sbjct: 56  DATNELRWIIAEV-RVEANKIMARG--KLPPIEEERVEELVKRRSAGEPLQYILGSADFG 112

Query: 62  NVRLTLSSDTFEPRPETELL-------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            + +        PRPET  +       + S++          + + ILDL TGT  + L 
Sbjct: 113 PLNIRCQKPVLIPRPETAHIFTRLSSTILSSVPSLTSASRPLEPLPILDLCTGTACISLL 172

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVI 168
           L   +P    VG+D S  A+ +  +N    G+ ER +    + F+        EG   ++
Sbjct: 173 LAHLNPLSTAVGIDNSPAAVSLGGANVKARGMEERVEVRYGNVFAEPARLLGREGKVGLV 232

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISL--DGGID--GLSHYRTIADGVSRHLNKDG--- 221
           VSNPPYI     + L   V+D++   +L  DG  D  GL+ Y  IA+ +   L  +G   
Sbjct: 233 VSNPPYIPLKEWEQLPKSVKDWESPTALLGDGKKDGEGLAFYERIAEMLPDLLLDEGEME 292

Query: 222 --------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                     +VE+G  Q   V  IF+S ++     ++D  G DR++
Sbjct: 293 KKGWKGVPRVAVEVGLGQARKVEEIFKSEQIKKTEIWQDQFGLDRMV 339


>gi|207721784|ref|YP_002252222.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum MolK2]
 gi|206586948|emb|CAQ17532.1| methylase of polypeptide chain release factors protein [Ralstonia
           solanacearum MolK2]
          Length = 245

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/224 (33%), Positives = 106/224 (47%), Gaps = 11/224 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              ++   +  VTGLS  Q+I      +D+  R  L     R L  E +  +LG R+F+ 
Sbjct: 28  PALEARMLVSHVTGLSRVQLITQDTYAIDNGVRMRLAELATRRLAGEPMAYLLGEREFFG 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               ++     PRP+TELLV+ AL     RIE RD   +LDLGTG+G + + +       
Sbjct: 88  RLFQVTPAVLIPRPDTELLVEQALD----RIEDRDAPDVLDLGTGSGIIAVTVALARRDA 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           +    D S  AL +A  NA T G +        DW+ ++        FD+IVSNPPYI S
Sbjct: 144 RVWATDASADALAVAAGNAQTLGAA-NVHVALGDWYGALPESDAPPAFDLIVSNPPYIAS 202

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                   ++R F+P  +L    DGL H RTI  G    L  DG
Sbjct: 203 ADAHLDQGDLR-FEPAGALTDHGDGLRHLRTIVAGAPARLAADG 245


>gi|302783851|ref|XP_002973698.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii]
 gi|300158736|gb|EFJ25358.1| hypothetical protein SELMODRAFT_99812 [Selaginella moellendorffii]
          Length = 336

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 9/236 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           +         I R         + G   + ++ L +      PRPETE L+D A A ++ 
Sbjct: 102 EELEQGWKERIDRR---RPFQYVTGSSHWRDLVLGVQEGVLIPRPETEQLIDLA-AAAMD 157

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERF 150
              +      +DLGTG+GA+ + + +        + VD S  A+ +A++NA    + +  
Sbjct: 158 GNSELARGVWVDLGTGSGAIAIGMARLLDGRGSVIAVDASEVAIAVAEANARRYKLQDAV 217

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             ++  W + +    G    IVSNPPYI S  +  L  EV   +P  +LDGG DG+ H  
Sbjct: 218 TLVKGSWLTPLRDEAGKLSGIVSNPPYIPSRNLGRLQAEVGKHEPMCALDGGDDGIDHLA 277

Query: 208 TIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            I  G    L   G  ++E  G  Q   V +I   +    +   KD+    R +  
Sbjct: 278 EICQGACWALKSGGFLALETDGGEQAQTVAKILSDKPFEDIKVVKDFAEMSRFVTA 333


>gi|86748298|ref|YP_484794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris HaA2]
 gi|86571326|gb|ABD05883.1| modification methylase, HemK family [Rhodopseudomonas palustris
           HaA2]
          Length = 354

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 96/232 (41%), Gaps = 6/232 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L   Q  +   + + D +   + + I + +        ++     
Sbjct: 89  DPIAEAVFLIGEALHLHPDQFEMFATARVTDHEAVGILHLIEQRITTRLPAAYLVNKIYM 148

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
             V   +      PR     L+DS        +  +   V R+LDL TG+G + +   + 
Sbjct: 149 RGVPFYVDERVIVPRSYIGELLDSHFDGGETSLIGDPEAVARVLDLCTGSGCLAILAARS 208

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE 176
            P      VD+S  AL +A  N   + + +R      D F+ +  +  +D+I++NPPY++
Sbjct: 209 FPNAAVDAVDLSEDALAVATRNVADHHLGDRLSLHHGDLFAPLLQDARYDLIITNPPYVD 268

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +  +  L  E R  +P ++ DGG DGL   R I      HL  DG    E+G
Sbjct: 269 ADGMANLPAECRA-EPAMAFDGGDDGLDIIRRILAEAKDHLTPDGGLLCEVG 319


>gi|124266993|ref|YP_001020997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Methylibium petroleiphilum PM1]
 gi|124259768|gb|ABM94762.1| Site-specific DNA-methyltransferase (adenine-specific) [Methylibium
           petroleiphilum PM1]
          Length = 288

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 9/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFY 61
           A  ++   +     L    +       +   +R  +   I R + +      +       
Sbjct: 28  AFDEAAWLVQWALDLPLDGLDEHAARPVSASERLVVDALIDRRIRQRLPAAYLTKQAWLQ 87

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V   +   T  PR     L+      ++         R+LDL TG G++ +      P 
Sbjct: 88  GVAFYVDERTIVPRSFIAELL---ADGTIDAWLGAHTRRVLDLCTGNGSLAVLAAMAWPE 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               G D+S  AL +AK N   +G+ +R   L+SD  + V G +D+I+ NPPY+ +  + 
Sbjct: 145 VSVDGSDLSEDALAVAKINVDAHGLGDRVTLLRSDGLARVHGPYDLILCNPPYVNAASMA 204

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++L GG DG+   R +       + +D +  +EIG N++ +  R F +
Sbjct: 205 DLPPEYRA-EPELALAGGEDGMDFVRKLLQDAPAQMTEDAVLVLEIG-NERANFERAFPT 262

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
            +   +       G+D+VLL  R
Sbjct: 263 IEAVWLET---SAGDDQVLLLTR 282


>gi|255566573|ref|XP_002524271.1| n6-DNA-methyltransferase, putative [Ricinus communis]
 gi|223536462|gb|EEF38110.1| n6-DNA-methyltransferase, putative [Ricinus communis]
          Length = 354

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 9/226 (3%)

Query: 43  VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
            R  + +    I+G   + +  L++      PRPETEL++D      L   E  + +   
Sbjct: 125 QRIEERKPFQYIVGCEHWRDFVLSVQEGVLIPRPETELIIDLVKGAVLNNEELSEGL-WA 183

Query: 103 DLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           DLGTG+GA+ + + K   P  + +  D+S  A  +A  N     +    +  +  WF  +
Sbjct: 184 DLGTGSGALAIGIAKILGPQGRVIATDLSPVAASVATYNVQRYDLQGMVEVRKGSWFEPL 243

Query: 162 ---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              EG    +VSNPPYI S  +  L  EV   +PRI+LDGGI G+     + +G +  L 
Sbjct: 244 NDVEGKLAGVVSNPPYIPSDDISGLQAEVGRHEPRIALDGGISGMDDLLHLTNGAASILK 303

Query: 219 KDGLCSVEI-GYNQKVDVVRIFESR--K-LFLVNAFKDYGGNDRVL 260
             G  + E  G  Q   ++   E+      F VN   D  G  R L
Sbjct: 304 PGGFFAFETNGEKQCKFLLHHMENECSGCFFNVNIVSDCAGIQRFL 349


>gi|297192416|ref|ZP_06909814.1| methytransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151357|gb|EDY61859.2| methytransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 272

 Score =  190 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 7/219 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   + R +    +  +LGW +F  VR+ +    F PR  +E LV  A+A + PR   
Sbjct: 38  HELAAMVERRIAGLPLEHVLGWAEFCGVRVAVDPGVFVPRRRSEFLVGRAIALAPPR--- 94

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GA+  A+L+     +    DI   A+  A  N    G       L  
Sbjct: 95  ---PVVVDLCCGSGALGAAVLRAVGAGELHAADIESAAVRCALRNVGPVGGRVHQGDLYD 151

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + + G  DV+++N PY+ +  +  L  E RDF+P ++LDGG DGL   R +     R
Sbjct: 152 PLPAGLAGRVDVLIANAPYVPTGEIGLLPPEARDFEPLVALDGGPDGLGIQRRVTARAGR 211

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNAFKDY 253
            L   G   +E    Q    V  F    L   V   +D 
Sbjct: 212 WLAPGGSLLIETSERQAPSTVAAFTRHGLQAEVAVCEDL 250


>gi|169838353|ref|ZP_02871541.1| modification methylase, HemK family protein [candidate division TM7
           single-cell isolate TM7a]
          Length = 278

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/245 (22%), Positives = 100/245 (40%), Gaps = 7/245 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           +  D+   L     ++   +   P+ ++ +     L   +   + H  I  IL +++FY 
Sbjct: 27  SQLDAELILQDTLSVAKTFLRAHPEYIIPEYFLPILNARLSLRVDHVPIAYILKYKEFYG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  ++  T  PRPE+E ++++    +   + K      +D+GTG+G + +    E P  
Sbjct: 87  RKFKVTPATLIPRPESEDIINAIKILNKDTVSKSA----IDIGTGSGILGITTSLECPNI 142

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K    DIS +AL IA  NA         +       S     FD I++N PY++    D 
Sbjct: 143 KVDLSDISPEALNIASINASNLKAKVNIN-KPFSLLSETNKKFDYIIANLPYVDKSWQDT 201

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                   +P ++L     GL     +      HLN+DGL  +E    Q   +++  +  
Sbjct: 202 SPD--LRHEPALALYADKSGLELIFKLIKQSPSHLNRDGLIFLEADPIQHDAIIKYADQY 259

Query: 243 KLFLV 247
               +
Sbjct: 260 SFTKI 264


>gi|21553723|gb|AAM62816.1| unknown [Arabidopsis thaliana]
          Length = 377

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 12/243 (4%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
              + + L     R  K    H ++G   + ++ L +      PRPETEL+VD      +
Sbjct: 137 SLEELYDLWR--QRIEKRRPFHYVVGCEHWRDLVLCVEEGVLIPRPETELIVDMV-EELV 193

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            R E      + +LGTG+GA+ + + K      + +  D+S  A+ +A  N     +   
Sbjct: 194 TRDEWFKKGILANLGTGSGAIAIGIAKVLGSRGRVIATDLSPVAIAVAGHNVHRYSLEGM 253

Query: 150 FDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  +  WF  +   EG    +VSNPPYI S  +  L  EV   +P+++LDGGIDG    
Sbjct: 254 IEVREGSWFEPLKDLEGKLVGLVSNPPYIPSDDIPGLQAEVGRHEPKLALDGGIDGTDSL 313

Query: 207 RTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRK----LFLVNAFKDYGGNDRVLL 261
             +  G SR L   G    E  G  Q   +V    +         +    D+ G +R + 
Sbjct: 314 FHLCHGASRMLQPGGFFVFETNGEKQSKMIVDYMMTSDLKDCFSDLKIVSDFAGINRFVT 373

Query: 262 FCR 264
             R
Sbjct: 374 GFR 376


>gi|333027514|ref|ZP_08455578.1| putative methytransferase [Streptomyces sp. Tu6071]
 gi|332747366|gb|EGJ77807.1| putative methytransferase [Streptomyces sp. Tu6071]
          Length = 287

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 18/241 (7%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  V           P+      +   L   + R +  E +  ++G   F+ 
Sbjct: 12  AEDEAELLLAAV-----------PEDA--AGREGALDALVARRVAGEPLEHVVGHAVFHG 58

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PF 121
           +R+ +    F PR  +E LV  AL      +     V +LDL  G+GA+ LAL     P 
Sbjct: 59  LRIAVGPGVFVPRRRSEFLVARALD----GVRAEGAVTLLDLCCGSGALGLALRTALGPR 114

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 D+   AL  A+ N    G       L +   +++ G  DV+ +N PY+ S  V 
Sbjct: 115 ATLHAADVDPGALRWARRNLAPVGAHVHEGDLYAPLPAALRGRVDVLTANVPYVPSEEVR 174

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P ++LDGG DGL   R +A+  +  L   G   VE G  Q  +V  IF +
Sbjct: 175 LLPAEARAHEPLVALDGGRDGLDLVRRVAEEAATWLAPGGRLLVESGERQAPEVAGIFTA 234

Query: 242 R 242
            
Sbjct: 235 A 235


>gi|328880846|emb|CCA54085.1| Methylase of polypeptide chain release factors [Streptomyces
           venezuelae ATCC 10712]
          Length = 260

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/242 (23%), Positives = 91/242 (37%), Gaps = 24/242 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L    G                     L   + R      +  ++GW  F  
Sbjct: 22  AEEEAEMLLASAAG------------------PAELDLMVERRASGLPLEHVVGWAGFAG 63

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ + +  F PR  TE L++ A+  + P          +DL  G+GA    LL      
Sbjct: 64  LRVEVDAGVFVPRRRTEFLMEHAVELARP------GAVCVDLCCGSGAAGAVLLDRVEGA 117

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DI   A+  A+ N    G       L +     + G  +++V+N PY+ +  +  
Sbjct: 118 EVHASDIEPAAVRCARRNVEPRGGRVYEGDLFAPLPPELRGRVEILVANVPYVPTEDIGL 177

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E RD +P ++LDGG DGL   R +A G    L   G   VE    Q      +  + 
Sbjct: 178 LPPEARDHEPLVTLDGGPDGLDVLRRVAAGAPEWLAPGGHLLVETSERQAGRACEVAAAA 237

Query: 243 KL 244
            L
Sbjct: 238 GL 239


>gi|39934242|ref|NP_946518.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris CGA009]
 gi|39648090|emb|CAE26610.1| possible adenine-specific methylase [Rhodopseudomonas palustris
           CGA009]
          Length = 340

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 5/231 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
             + ++   +     L   Q  +   + +  R+   +   I R +        ++     
Sbjct: 76  DPIAEAVFLVGEALHLHPDQFEMFASARVTTREAAAILGLIERRIGSRLPAAYLVNKIYM 135

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
             V   +      PR     L+DS        +      + R+LDL TG+G + +     
Sbjct: 136 RGVPFYVDERVIVPRSYIGELLDSHFDGGDTSLIDAPEAIERVLDLCTGSGCLAILAAYA 195

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
            P      VD+S  AL +A  N   + + +R      D F  + +  +D+I++NPPY+++
Sbjct: 196 FPNATVDAVDLSKDALAVATRNVAEHRLDDRVSLYHGDLFGPLGDERYDLIITNPPYVDA 255

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +  L  E R  +P ++ DGG DGL+  R I      HLN DG    E+G
Sbjct: 256 DGMASLPAECRA-EPAMAFDGGDDGLTIIRRILAEAKHHLNPDGGLLCEVG 305


>gi|296136206|ref|YP_003643448.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thiomonas intermedia K12]
 gi|295796328|gb|ADG31118.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Thiomonas intermedia K12]
          Length = 316

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 15/256 (5%)

Query: 3   ALRDSHSFLCRVTGLSSH---QVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWR 58
           A  ++   +    GL +             L  +Q   +     + +   + +  +LG  
Sbjct: 42  AEDEAAWLVLHAAGLPASEAGDFATYAHQSLTAQQALQIETVTAQRIATRQPLAYLLGEA 101

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDS-ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
               +R  +      PR     L+D  AL   L         R+LD+ TG+G + +    
Sbjct: 102 WLVGLRFVVDPRVIVPRSFIAELLDEGALDPWL----TEPPHRVLDMCTGSGCLAILAAL 157

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
                +   VD+S  AL +A+ N     +  R   + SD ++S+       +D+++ NPP
Sbjct: 158 VWNDAQVDAVDLSADALAVAEINREAYALQHRLRLIASDLWASLAAAPSQAYDLVLCNPP 217

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+   R        HL+  G+  +E+G N++ 
Sbjct: 218 YVPAASMRALPEEYR-HEPEMALAGGADGMDLVRRFLHDAPAHLSARGIVVLEVG-NERA 275

Query: 234 DVVRIFESRKLFLVNA 249
                F +     +  
Sbjct: 276 AFEAAFPTLPAIWLET 291


>gi|224372757|ref|YP_002607129.1| modification methylase, HemK family [Nautilia profundicola AmH]
 gi|223588590|gb|ACM92326.1| modification methylase, HemK family [Nautilia profundicola AmH]
          Length = 257

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 14/251 (5%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             L +V       + +  D  +       L            +  I     FY  R  + 
Sbjct: 14  YILEKVLNKDKTWLFLHDDLEVPKEAVEILRKV----KSGYPVEYIFEEVWFYGDRFYIK 69

Query: 69  SDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                PR +TE++++ A+     + + K +  +I+D  TG+G + + + K +   K +  
Sbjct: 70  EGVLIPRDDTEVVLERAIKLINEKCKTKSEKCKIVDCCTGSGVIAIEIAKHT-NAKVIAT 128

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DIS  A+E+A+ N   + V               E   D++VSNPPY+E+         V
Sbjct: 129 DISDTAIEVAEKNIALHNVDVEVKKCDLLKCEGEEIKADILVSNPPYVENSWQK---PNV 185

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             ++P ++  GG DGL   + +         K     +EIGYNQK  +    +  K    
Sbjct: 186 --YEPDLAFYGGDDGLDIVKELILKAKDL--KYKAAVIEIGYNQKNLLSEFLKD-KAESF 240

Query: 248 NAFKDYGGNDR 258
             F D  GN R
Sbjct: 241 EFFNDLAGNVR 251


>gi|313679786|ref|YP_004057525.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Oceanithermus profundus DSM 14977]
 gi|313152501|gb|ADR36352.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Oceanithermus profundus DSM 14977]
          Length = 277

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 8/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  ++   L   TG    +   +  + L+  Q   L  A+ R    E +  ILG   F 
Sbjct: 23  QAEAEARQLLEHATGAQGARFWREARAALEPAQERLLEEALARRAAGEPLQLILGTAVFC 82

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +      PRPETE LV+ AL     R+ +    R+LD+GTG GA+ LAL +  P 
Sbjct: 83  GLELEVRPGVLVPRPETERLVELALE----RLPESGPARVLDVGTGGGAIALALKQARPE 138

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 ++S  ALE+A++NA   G++     L +   + +  L D+IVSNPPY+     +
Sbjct: 139 LDVYASEVSEAALELARANARRLGLA--VTFLHAPLTAGLWDL-DLIVSNPPYLPEAYRE 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               E   ++   +L  G DGL+  R +    +  L   G   +E+       + R  E 
Sbjct: 196 AAPPE-LAWEAETALYAGADGLAVARPLLAEAAGALAAGGWLLLELDPTNVHVLAREAER 254

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                V    D  G  R L   R
Sbjct: 255 AGYGEVAVLPDLAGRARFLRARR 277


>gi|269792433|ref|YP_003317337.1| modification methylase, HemK family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100068|gb|ACZ19055.1| modification methylase, HemK family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 284

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 106/262 (40%), Gaps = 12/262 (4%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           ++   ++   L    G+   +++   +  +             R  K E +  +LG  DF
Sbjct: 21  LRPSWEASLILATCLGVGREKLVSMGEEDVSP---HVALEMTARRAKGEPLAYVLGTMDF 77

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                 +      PRPETE+L   A     PR       R LD GTG+G +  +L     
Sbjct: 78  LQWNFLVGPGCLIPRPETEVLASLAAETLGPR------GRFLDWGTGSGCIACSLAMMVD 131

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIES 177
             +GV +D S  AL+ A  N     +S R   +       +      FD++V+NPPYI S
Sbjct: 132 GSQGVAMDASPGALKWAWRNVQRYRLSNRVLLVHGSSAHFISQDLTPFDLVVANPPYIPS 191

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L   V  F+P ++L+GG  G+        G  R L   G   +E   + ++ ++ 
Sbjct: 192 EHMGELDGSVSRFEPHLALNGGDGGIQVPVEWLRGAVRLLRAGGQVLMETAGDWQLSILE 251

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
             E   L  V + +D  G  RV
Sbjct: 252 ALEIEGLSFVGSHQDQFGVRRV 273


>gi|315604644|ref|ZP_07879707.1| HemK family modification methylase [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315313656|gb|EFU61710.1| HemK family modification methylase [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 303

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 99/263 (37%), Gaps = 10/263 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D    L    G+SS   +    + L   Q   L + +        +  + G   F ++ L
Sbjct: 33  DVRELLQWACGVSSPWSV---PTTLSAEQAEKLRSGVGERALRIPLQHVTGRMYFRSLTL 89

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 F  RPETE+L   A+  +   +  R   R++DL TG+GA+  ++  E+   +  
Sbjct: 90  QSIPGVFVVRPETEVLAGLAIDEAAAVVRARGEARVVDLCTGSGAIAFSVATEAEHTEVW 149

Query: 126 GVDISCKALEIAKSNAVTNG----VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            V+       +A  N    G      ER D       + ++ + DV+V+NPPY+ +  + 
Sbjct: 150 AVEKEPDPFALACRNRDLLGARGVHLERGDATDPATLAHLDAMVDVVVTNPPYVPADEMP 209

Query: 182 CLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                  D  P  +L GG  DG      I       L   G+  +E   +Q   +     
Sbjct: 210 TQPEAAAD--PHSALYGGSSDGTDIPVRIIGRCLTLLRPGGVLLMEHSPSQAECLRERAR 267

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
           +  L  V+   D  G  R L   
Sbjct: 268 AVGLCDVSTAPDLAGRARFLRAR 290


>gi|332525856|ref|ZP_08401997.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rubrivivax benzoatilyticus JA2]
 gi|332109407|gb|EGJ10330.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rubrivivax benzoatilyticus JA2]
          Length = 289

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +    GL    +       L           +   +   +    + G    
Sbjct: 27  NAFDEAAWLVLWKLGLPLDALDEHAARELSAADIAGCETLLAERIATRKPAAYLTGEAWL 86

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             V  ++      PR    L+ +     ++         R+LDL TG G++ +      P
Sbjct: 87  QGVPFSVDERVIVPRS---LIAEPLADGTIDAWLSERTRRVLDLCTGNGSLAVLAAMAWP 143

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    D+S  AL +A  N   +G+  R    Q D  ++ +G++D+++ NPPY+ +  +
Sbjct: 144 EVEVDASDLSADALAVAAINVARHGLQSRIRLRQGDGLAAADGVYDLVLCNPPYVNAEAM 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P ++L GG DG+   R +   + RHL+  G+  +EIG+  +      F 
Sbjct: 204 AALPAEYRA-EPELALAGGADGMDFVRLLLAELPRHLSPHGVLVLEIGHE-RAHFEAAFP 261

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
             +   +       G D+VLL  
Sbjct: 262 RLEAVWLET---SAGEDQVLLLT 281


>gi|237752964|ref|ZP_04583444.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375231|gb|EEO25322.1| protoporphyrinogen oxidase [Helicobacter winghamensis ATCC BAA-430]
          Length = 285

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 108/270 (40%), Gaps = 19/270 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  V GL   ++       ++          + R + +E I  ++    FY
Sbjct: 24  RPRLEAEILLGFVLGLQRVELHARFHQNVESFFVESYLRLLKRRVNYEPIEYLIEKVSFY 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              L +S     PRPETE+L    L  +L  I  +D   I ++G G+GA+ + L   S  
Sbjct: 84  GEELYVSYGALIPRPETEIL----LEKTLELIVSKDCKNIAEIGVGSGAISVLLAYLSKG 139

Query: 122 FK------GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNP 172
            K          DIS +AL  A  N     V        S +      +   FD++VSNP
Sbjct: 140 LKSDSNLSFHASDISPEALFNACVNREKFKVK-NLSLHLSAYLDFNVKLGINFDILVSNP 198

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI+      +  +   ++P+ +L GG+ G      I D   +          E+GY+QK
Sbjct: 199 PYIKEGE---MLPKSLSYEPQKALFGGVRGDEMLLNIIDLAQKFKIP--YLLCEMGYDQK 253

Query: 233 VDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
             V    ++     V  +KD  G DR  + 
Sbjct: 254 ESVKAHLKNTPHKSVEFYKDLAGLDRGFIL 283


>gi|291242281|ref|XP_002741036.1| PREDICTED: HemK methyltransferase family member 1-like
           [Saccoglossus kowalevskii]
          Length = 228

 Score =  189 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 13/220 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +  +LG  DF ++ L L    F PRPETE LV+  L +  PRI     +  L++G G+
Sbjct: 1   MPLQYVLGEWDFRDLTLKLRPPVFIPRPETEELVEMILQYHRPRIN----LHFLEVGCGS 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVE 162
           GA+ L+LL E P   G+ +D S  A+++ + NA    + +R      +        + + 
Sbjct: 57  GAISLSLLHEIPQAIGIAIDQSHAAVKLTEHNATRLNLHDRLTVHNIEVVDSFKIPNDIA 116

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G +D I+SNPPYI    +  L  E+  ++   +L GG DGL   + I       L  +G 
Sbjct: 117 GPYDAIISNPPYIFHDDMKDLAPEISRYEDTKALHGGHDGLEVTKNILKMARYLLKHEGS 176

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFK---DYGGNDRV 259
              E        +    ++     V       D+    R 
Sbjct: 177 IWFECDPRHPTMIKSWLDNHPETDVKFVDVGYDFSDRARF 216


>gi|291320736|ref|YP_003516001.1| protoporphirogen oxidase HEMK [Mycoplasma agalactiae]
 gi|290753072|emb|CBH41048.1| Protoporphirogen oxidase HEMK [Mycoplasma agalactiae]
          Length = 240

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 18/242 (7%)

Query: 27  DSVLDDRQRFFLTNAI-----VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           + +L +++R+ L   +      +  +   I  I+G+ ++ NVR+ L+     PR ETE L
Sbjct: 5   EDLLLEKKRYGLELKVSSLELKKLNQGYPIQYIMGYVEYANVRINLNHKVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V   L   L     +  +++LDL  G+G + +AL K       +  DI  +A+  A  N 
Sbjct: 65  VYILLNEYL-----KPGMKVLDLCAGSGFIGIALKKNLDSINVILSDIDNEAIMQANENV 119

Query: 142 VTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           V N  +      +QSD F+ ++G FD+IVSNPPY++    D +   V+ F+P I+L    
Sbjct: 120 VLNFKNTTGIQIVQSDCFNDIKGKFDLIVSNPPYLDYDDKD-VDESVKKFEPEIALFAKD 178

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            G   Y  I +    +LN+ G+ + EI         +I            KD    DR  
Sbjct: 179 SGWYFYEKILNEAKHYLNEGGILAFEINPKHIDRWKQI------DGAKIVKDMSLKDRFA 232

Query: 261 LF 262
             
Sbjct: 233 FI 234


>gi|257453414|ref|ZP_05618709.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enhydrobacter aerosaccus SK60]
 gi|257449166|gb|EEV24114.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Enhydrobacter aerosaccus SK60]
          Length = 389

 Score =  189 bits (482), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 104/261 (39%), Gaps = 30/261 (11%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFE 73
              S+ + I+  D  L + ++  +   + R + + + +  ++    F ++   +      
Sbjct: 104 LDWSADEQIL--DCRLTNSEKSEVLTLLQRRIVERKPLSYLINLSYFCDLPFYVDERVLI 161

Query: 74  PRPETELLVDSAL-----------------------AFSLPRIEKRDVVRILDLGTGTGA 110
           PR     L+                              L   +     R+LDL TG+G 
Sbjct: 162 PRSPIAELIRQQFYPYFEPNDLVERISGTTNDKKFHDHGLYDKQLAQPERMLDLCTGSGC 221

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + +AL    P       DI   ALE+A  N   + ++ + + ++S+ F  V  E  +D+I
Sbjct: 222 IAIALASRFPDAMVDASDIDKNALEVAAVNVDHHHMNHQVNLIESNLFEKVPAENQYDLI 281

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPPY+++  +  L  E    +P  +L  G DGL     I      +L +DGL   E+G
Sbjct: 282 VTNPPYVDAATMADLPPEFL-HEPDHALAAGQDGLDLVHHILYNAPDYLTRDGLLVCEVG 340

Query: 229 YNQKVDVVRIFESRKLFLVNA 249
            + +  + + +   +   +  
Sbjct: 341 -DSEWALRQAYPEIQFDWLTF 360


>gi|301105206|ref|XP_002901687.1| methylase subunit of polypeptide release factor, putative
           [Phytophthora infestans T30-4]
 gi|262100691|gb|EEY58743.1| methylase subunit of polypeptide release factor, putative
           [Phytophthora infestans T30-4]
          Length = 261

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 45/263 (17%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
            + + R  K E +  ++G ++F+++   ++ DT  PR ++E+L+++ +    P       
Sbjct: 4   KHCVERRSKGEPLAYVIGRKEFWSLEFKVTRDTLIPRSDSEILIETLMDQFHP----ETP 59

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +RILD+GTG+G + L+ L E P   GVG+DIS  AL IAK NA +N + ER + L  D  
Sbjct: 60  LRILDIGTGSGCLLLSALSEFPRATGVGIDISAGALAIAKENAQSNKLEERSEFLLRDLK 119

Query: 159 ------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG------- 199
                        ++   FDVI+ NPPYI    +D +G +V  ++P I+L  G       
Sbjct: 120 TLPGLRSDVAEDEALFRRFDVILCNPPYIPGRELDLVGPDVLKYEPHIALFSGGAATADK 179

Query: 200 ----IDGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIF--------------E 240
                 GL  YR +      +L       VEIG  +Q  +V  +F               
Sbjct: 180 CDLDPKGLRMYR-LLHESVDNLKI--CLLVEIGSEDQAREVKELFSSSTKAAVLQSEGSR 236

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
             +L       D  G  R LLF 
Sbjct: 237 RLRLQFERYLFDTSGKYRGLLFR 259


>gi|254431491|ref|ZP_05045194.1| modification methylase, HemK family [Cyanobium sp. PCC 7001]
 gi|197625944|gb|EDY38503.1| modification methylase, HemK family [Cyanobium sp. PCC 7001]
          Length = 289

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 21  QVIVDPDSVLD-DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           ++ +DP + +  +R    +     R L+  E +  ++G   + +V L +      PR ET
Sbjct: 40  RLRLDPSAPVRLNRAPAQIEQLWHRHLQTAEPLQYLVGLCPWRDVDLQVGPGVLIPRQET 99

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           ELLVD AL         R      DLGTG+G + +AL +  P  +G+ VD+S +AL  A 
Sbjct: 100 ELLVDLALELC-----SRPPALWADLGTGSGCLAVALARLWPEAQGLAVDLSAEALNQAG 154

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +N      + +   LQ  W+  ++   G   + ++NPPYI + +   L   VRD +PR++
Sbjct: 155 TNLQAFERAGQVRLLQGSWWEPLKPWRGSVQLALANPPYIPTAVWTDLEPVVRDHEPRLA 214

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L+ G DGL   R +  G +  L   GL  +E  ++Q   V  +  +  L  V A +D   
Sbjct: 215 LEAGSDGLDAIRAVVAGAATGLAPGGLLLLEHHHDQSERVSCLLAAAGLIEVQAHRDLEN 274

Query: 256 NDRVLLFCR 264
            +R     R
Sbjct: 275 VNRFASARR 283


>gi|257095184|ref|YP_003168825.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257047708|gb|ACV36896.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 297

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 107/242 (44%), Gaps = 9/242 (3%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
             D+ L   +R  L   I R + +   +  +         R  +      PR     L+ 
Sbjct: 59  FLDARLTSAERAGLLRIIERRIGERLPVAYLTNEAWLGEYRFYVDQRVIVPRSFIAELLR 118

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             LA  +   +   V  +LDL TG+  + +      P  +   VD+S  AL +A+ N   
Sbjct: 119 EQLAPWID--DPEAVGAVLDLCTGSACLAIIAAHAFPAARIDAVDVSPDALVVARRNVED 176

Query: 144 NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             ++ R   ++ D F+ ++   +D+I++NPPY+++  +  L  E R  +P ++L  G DG
Sbjct: 177 YDLATRIRLVEGDLFAGLKQRRYDLIIANPPYVKASSMATLPDEYRR-EPELALASGEDG 235

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           L   R I  G  +HL  +GL  VEIG+N + ++   F +     ++      G+  V L 
Sbjct: 236 LDLTRAILAGARKHLKANGLLVVEIGHN-REELEAAFPTTPFTWLDT---SAGDQYVFLL 291

Query: 263 CR 264
            R
Sbjct: 292 HR 293


>gi|229494562|ref|ZP_04388325.1| methytransferase [Rhodococcus erythropolis SK121]
 gi|229318924|gb|EEN84782.1| methytransferase [Rhodococcus erythropolis SK121]
          Length = 264

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 94/238 (39%), Gaps = 21/238 (8%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              ++++        R R  L   + R +  E +  +LGW +F  +R+ + S  F PR  
Sbjct: 31  DEARLLLH-----TARSRDELDAMVDRRVAGEPLEPVLGWAEFCGLRIHIDSGVFVPRRR 85

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE L   A +   P         ++D+  G+GAV + L           VD+   A+  A
Sbjct: 86  TEFLARQACSLVTP------GSVVVDMCCGSGAVGVVLQSTLNAVDLYAVDVEPAAVRCA 139

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + N            L+ D F  +     G  DV+V+N PY+ +  +  +  E R  +P 
Sbjct: 140 RRNITPPE-----RVLEGDLFEPLPTKLLGRVDVVVANAPYVPTESIRLMPPEARLHEPL 194

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAF 250
           +SLDGG DGL   R I    +  L   G   VE    Q    V  F        V  +
Sbjct: 195 VSLDGGTDGLDLQRRIIADAAPWLRPGGCLLVETSTEQVEMTVETFTRGGFLTRVATY 252


>gi|19552425|ref|NP_600427.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|62390089|ref|YP_225491.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|145295340|ref|YP_001138161.1| hypothetical protein cgR_1280 [Corynebacterium glutamicum R]
 gi|21323968|dbj|BAB98594.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|25246523|gb|AAN72320.1| protoporphyrinogen oxidase [Corynebacterium glutamicum]
 gi|41325425|emb|CAF19905.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|140845260|dbj|BAF54259.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 279

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 14/266 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L D+      + G     + +     +          A+ R  + E +  ILG      
Sbjct: 23  PLVDARLIAAHLLGCGPLDIALRMRDEVP----AGFAAAVERRARREPLQHILGTAPMGP 78

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +    F PRPETE+L D A+      +EKR   +I+DL TG+GA+   +       
Sbjct: 79  LDLHVGPGVFIPRPETEVLADWAVRQVAGDVEKR---KIVDLCTGSGALAAYIGHALIDA 135

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
               V++   A   A+ N        +    D       + V G  D++VSNPPY+    
Sbjct: 136 TLYAVELDPGAATWAQRNFDEFAPQVKLIHGDVTDPTLLAEVHGTIDLVVSNPPYVPES- 194

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  EV   DP +++  G DG+     +   +   L   G   +E        V ++F
Sbjct: 195 -DDLDPEVYQ-DPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEHDDTTSDAVRQVF 252

Query: 240 ESR-KLFLVNAFKDYGGNDRVLLFCR 264
                   +    D  G  R +   +
Sbjct: 253 SQHGGFGTIEVLHDLTGRARFVTARK 278


>gi|326506000|dbj|BAJ91239.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 361

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 17/245 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           + LD+ +  +L +   R         ++G   + ++ + +      PRPETE +VD    
Sbjct: 125 APLDELEALWLRHVRDRR----PFQYVVGNEHWKDLVVAVRDGVLIPRPETEAVVDMV-- 178

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGV 146
                +E        DLGTG+GA+ +A+ +   P  +    D+S  A+E+A+ N    GV
Sbjct: 179 ---GAVEGFQDGWWADLGTGSGAIAVAVARMLGPAGRVFATDVSEVAVEVARLNVHRYGV 235

Query: 147 SERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            ++ +  +  WF  +E   G    ++SNPPYI +  +  L  EV   +P+++LDGG DGL
Sbjct: 236 QDKVEIRRGSWFEPLEDVKGKLMGVISNPPYIPTDDLPGLQPEVGWHEPKLALDGGKDGL 295

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259
            H   + +G+S  L   G    E  G  Q   +V    ++       V A  D+    R 
Sbjct: 296 DHLLHLCEGLSSALMPGGFFVFETNGNKQSEFLVDFISTKWSSSFCDVEAVLDFADIKRF 355

Query: 260 LLFCR 264
           +   R
Sbjct: 356 VRGYR 360


>gi|302787959|ref|XP_002975749.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii]
 gi|300156750|gb|EFJ23378.1| hypothetical protein SELMODRAFT_103487 [Selaginella moellendorffii]
          Length = 336

 Score =  189 bits (480), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 9/236 (3%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
           +         I R         + G   + ++ L +      PRPET+ L+D A A ++ 
Sbjct: 102 EELEQGWKERIDRR---RPFQYVTGSSHWRDLVLGVQEGVLIPRPETKQLIDLA-AAAMD 157

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERF 150
              +      +DLGTG+GA+ + + +        + VD S  A+ +A++NA    + E  
Sbjct: 158 GNSELARGVWVDLGTGSGAIAIGIARLLDGRGSVIAVDASEVAIAVAEANARRYKLQEAV 217

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             ++  W + +    G    IVSNPPYI S  +  L  EV   +P  +LDGG+DG+ H  
Sbjct: 218 TLVKGSWLTPLRDEAGKLSGIVSNPPYIPSRNLGRLQAEVGKHEPICALDGGVDGIDHLA 277

Query: 208 TIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            I  G    L   G  ++E  G  Q   V +I   +    +   KD+    R +  
Sbjct: 278 EICQGACWALKSGGFLALETDGGEQAQTVAKILSDKPFEDIKVVKDFAEMSRFVTA 333


>gi|312149707|gb|ADQ29778.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi N40]
          Length = 286

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            LN +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|224534065|ref|ZP_03674648.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a]
 gi|224512764|gb|EEF83132.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi CA-11.2a]
          Length = 286

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            LN +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|145342148|ref|XP_001416155.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901]
 gi|144576380|gb|ABO94448.1| protein methyltransferase [Ostreococcus lucimarinus CCE9901]
          Length = 398

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 23/254 (9%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           + + Q+ ++   I R      +  +     + ++  T+++    PRPETELL+D A  + 
Sbjct: 138 IPELQQLWMRRIIDR----VPLQYLTNTAHWRDMEFTVNTSVLIPRPETELLIDFACEWL 193

Query: 90  LPRIEKRDVVRI---------LDLGTGTGAVCLALLKESP-----FFKGVGVDISCKALE 135
                  +   +         LDLGTG+G + +AL KE             VD+S  ALE
Sbjct: 194 RELESNTENHTMNYNLLSGPWLDLGTGSGILAIALAKELQRKCADASSVYAVDVSVAALE 253

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +A+ NA  NGV +   TL   WF+ ++    F  I++NPPYI + +++ L  EV   +P 
Sbjct: 254 LARDNARRNGVQDSIKTLHGSWFNPIKKDVRFTGILTNPPYIPTDLLESLQPEVCSHEPW 313

Query: 194 ISLDGGIDGL-SHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRK-LFLVNAF 250
           ++LDGG     +H  TI   V   L   GL +VE  G  Q   V  +  S +    V+  
Sbjct: 314 LALDGGGGDGSAHLVTICRDVKNFLLPGGLFAVETHGLEQARLVQHLLNSTEAFRDVHLK 373

Query: 251 KDYGGNDRVLLFCR 264
            DY G  R +   +
Sbjct: 374 ADYSGIVRYVTARK 387


>gi|271966754|ref|YP_003340950.1| HemK family modification methylase [Streptosporangium roseum DSM
           43021]
 gi|270509929|gb|ACZ88207.1| HemK family modification methylase [Streptosporangium roseum DSM
           43021]
          Length = 293

 Score =  188 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 58/216 (26%), Positives = 88/216 (40%), Gaps = 7/216 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   + R +    +  +LGW +F  +R+T+    F PR  TE L   A+A +    ++
Sbjct: 50  ADLAAMVDRRVAGLPLEHVLGWAEFCGLRITVDPGVFVPRRRTEFLAHQAVAVARQAADQ 109

Query: 96  -------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                  R    ++DL  G+GAV   L+      +   VDI    +  A  N    G   
Sbjct: 110 ADRAGRVRPRTVVVDLCCGSGAVGATLIAALDGVELHAVDIDPAEVRCAHRNVAAAGGQV 169

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               L     +++ G  DV+V+  PY+ +  +  L  E R  +PR++LDGG DGL   R 
Sbjct: 170 YEGDLYEPLPATLRGRVDVLVACAPYVPTEAIGLLPPEARIHEPRVALDGGADGLDVVRR 229

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +       L  DG   VE    Q    V       L
Sbjct: 230 VIAEAPLWLAPDGSLLVETSERQAPRTVEAVARAGL 265


>gi|254514209|ref|ZP_05126270.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR5-3]
 gi|219676452|gb|EED32817.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR5-3]
          Length = 321

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 11/219 (5%)

Query: 17  LSSHQVIVDPDSVL------DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           LS+  + +D D  +      ++  +  L     R      +  + G   F  +       
Sbjct: 61  LSAAGLPLDSDDKVLGLPLGEEAWQTALRWLWGRIEDRTPLPYLTGRAWFAGLEFYCDQR 120

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR     L +   +   P   K+   RILDL  G G + +A     P  + V  DI 
Sbjct: 121 ALVPRSP---LAEVIRSDYSPWYSKKTPTRILDLCCGGGCIGIAAAVYQPELQVVLADID 177

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             AL +A+ N     +  R    QSD   ++ +  FDVI+ NPPY+++  + C+  E   
Sbjct: 178 ADALSLARENIARYELQSRVQVRQSDLMDALGDERFDVILCNPPYVDANDLACMPAEYHC 237

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +P   L  G DGL   R I     +HL  +GL  +E+G
Sbjct: 238 -EPPRGLGSGEDGLDLARRILRNAQQHLTPEGLLFLELG 275


>gi|206896464|ref|YP_002247174.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206739081|gb|ACI18159.1| protoporphyrinogen oxidase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 266

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 16/255 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            +  V G+S   V +D D ++D+ +       I    ++     I G+  FY     +  
Sbjct: 26  LISYVFGVSKIDVALDKDIIVDEGE---FRRVIYLLGENVPFAYITGYEAFYGRDFYVLP 82

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             F PR ETELLV+ AL        K      LD GTG+GA+ ++LL E+P  +GV V+I
Sbjct: 83  GVFIPRNETELLVELAL--------KEPFNSFLDFGTGSGAIAISLLLENPKSQGVAVEI 134

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S       K NA    V  R   + +       G+FD+I+SNPPY+   + + +   V+ 
Sbjct: 135 SHVGQLCTKYNAEKFEVQNRLAIVSTL---PENGMFDLIISNPPYVAYELFEEVDYSVKA 191

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           F+P  ++    D +  +R I      HL+  G   +EI    + D+ ++  S   +    
Sbjct: 192 FEPLQAVFP-EDPVLVFRDILTYSLSHLSDAGRVILEIDSYVESDLQKLASSLGFY-YQV 249

Query: 250 FKDYGGNDRVLLFCR 264
            KD    DR+ +  R
Sbjct: 250 TKDLSQFDRICILSR 264


>gi|238026889|ref|YP_002911120.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Burkholderia glumae BGR1]
 gi|237876083|gb|ACR28416.1| Methylase of polypeptide chain release factors [Burkholderia glumae
           BGR1]
          Length = 308

 Score =  188 bits (479), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 13/254 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L   +   +   I R   +      +      
Sbjct: 37  NAYDEAVYLVLHTLHLPLDTLEPFLDARLLADEIDAVLQRIERRAGERLPAAYLTNEAWM 96

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  +      PR     L+D  L   +   E+  V  +L+L TG+G + +   +  P
Sbjct: 97  HGHRFYVDERVIVPRSFIGELLDDGLQPYVADPEQ--VGAVLELCTGSGCLAVLAAEAFP 154

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSNP 172
             +   VD+S  AL +A+ N     +  R      D ++ +           +DVI+SNP
Sbjct: 155 NAEIDAVDLSEDALAVAEINVADYRLDHRIALHHGDLYAPLPAERLADPELRYDVILSNP 214

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY+ +  +  L  E R  +P ++L GG DG+   R I     + L +DG+  VEIG N++
Sbjct: 215 PYVNAASMAALPDEYR-HEPEMALAGGDDGMDVVRRILREAKKWLKEDGVLVVEIG-NER 272

Query: 233 VDVVRIFESRKLFL 246
             V   F    L  
Sbjct: 273 PHVEAAFGGLDLIW 286


>gi|90422424|ref|YP_530794.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodopseudomonas palustris BisB18]
 gi|90104438|gb|ABD86475.1| modification methylase, HemK family [Rhodopseudomonas palustris
           BisB18]
          Length = 367

 Score =  188 bits (478), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 52/227 (22%), Positives = 90/227 (39%), Gaps = 5/227 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVR 64
           ++   +C    L   +      + +   +   +   I R +        ++       + 
Sbjct: 106 EAAFLVCDTLYLHPERFEEFAAARVTAAEGEQILEVIHRRVTTRLPAAYLVNKAYMLGLP 165

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESPFF 122
             +      PR     L+ S        +  +   V  +LDL TG+G + +   +  P  
Sbjct: 166 FYVDERVIVPRSFIGELLGSHFDGEDGSLIGDPEAVESVLDLCTGSGCLAVLASQRFPNA 225

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
           +   VD S  ALE+A  N     + +R    Q D F  + +  +D+I+SNPPY+++  + 
Sbjct: 226 RIDAVDASPDALEVAAENIDIYELEDRVTLYQGDLFKPLGDTRYDLIISNPPYVDAQGMA 285

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            L  E R  +P ++  GG DGL   R I     +HL   G    EIG
Sbjct: 286 DLPEECRA-EPELAFFGGEDGLDIVRRILAEAKQHLTPTGGLLCEIG 331


>gi|91787869|ref|YP_548821.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polaromonas sp. JS666]
 gi|91697094|gb|ABE43923.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polaromonas sp. JS666]
          Length = 296

 Score =  187 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 11/265 (4%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDF 60
            A  ++   +    GL    +    + V+       +      R    +    +      
Sbjct: 37  NAFDEAAWLVLWKLGLPLDDLDSVENKVVAPADIEQVAMLFEARISSRKPAAYLTREAWL 96

Query: 61  YNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             +   +      PR     L VD+++   L      +  R+LDL TG G++ +      
Sbjct: 97  MGIPFYVDERVIIPRSLIAELLVDASIDPWLD----ENTRRVLDLCTGNGSLAVLAAMTY 152

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P       DIS  AL +A+ N   + + +R   ++SD  ++  G +D+I+ NPPY+ +  
Sbjct: 153 PEVTVDAADISPDALAVARINVDRHQLQQRITLIESDGLAACPGPYDLILCNPPYVNAAS 212

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +P ++L GG DG+   R++    +RH++++ +  +EIG  +  +  R F
Sbjct: 213 MAALPAEFRA-EPGLALAGGADGMDFIRSLFLNAARHMSENAVLVLEIGNERG-NFERAF 270

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
              +           G+D+V++  R
Sbjct: 271 PHLEPLWFET---SAGSDQVMILTR 292


>gi|77747651|ref|NP_778829.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa Temecula1]
 gi|182681193|ref|YP_001829353.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa M23]
 gi|182631303|gb|ACB92079.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Xylella fastidiosa M23]
 gi|307579639|gb|ADN63608.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa subsp. fastidiosa GB514]
          Length = 308

 Score =  187 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 36  NALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRVTERVPVAYLTGDAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 96  AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++  G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 153 HWRVDGSDISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V ++ 
Sbjct: 212 TDALPQEY-GYEPELGLRAGPDGLNLVLKILRDAPAHLDEEGLLICEVGESEQQLV-QLL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PQVDFAWVEF 279


>gi|77747543|ref|NP_298657.2| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa 9a5c]
          Length = 308

 Score =  187 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 36  NALDEATQLVLHALHLPPDLGPAYGQARLLHTEKECVLALFERRVTERVPVAYLTGDAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 96  AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +   G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 153 HWSVDGADISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V  + 
Sbjct: 212 TDALPQEY-GYEPELGLRAGPDGLNLVLKILRDAPAHLDEEGLLICEVGESEQQLVR-LL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PQVDFAWVEF 279


>gi|18203346|sp|Q9PDL1|Y1368_XYLFA RecName: Full=Uncharacterized adenine-specific methylase XF_1368
 gi|9106371|gb|AAF84177.1|AE003968_8 adenine-specific methylase [Xylella fastidiosa 9a5c]
          Length = 312

 Score =  187 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 40  NALDEATQLVLHALHLPPDLGPAYGQARLLHTEKECVLALFERRVTERVPVAYLTGDAWF 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 100 AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +   G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 157 HWSVDGADISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V  + 
Sbjct: 216 TDALPQEY-GYEPELGLRAGPDGLNLVLKILRDAPAHLDEEGLLICEVGESEQQLVR-LL 273

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 274 PQVDFAWVEF 283


>gi|32130318|sp|Q87DS5|Y606_XYLFT RecName: Full=Uncharacterized adenine-specific methylase PD_0606
 gi|28056599|gb|AAO28478.1| adenine-specific methylase [Xylella fastidiosa Temecula1]
          Length = 312

 Score =  187 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 40  NALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRVTERVPVAYLTGDAWF 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 100 AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 156

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++  G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 157 HWRVDGSDISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V ++ 
Sbjct: 216 TDALPQEY-GYEPELGLRAGPDGLNLVLKILRDAPAHLDEEGLLICEVGESEQQLV-QLL 273

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 274 PQVDFAWVEF 283


>gi|220911261|ref|YP_002486570.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
 gi|219858139|gb|ACL38481.1| modification methylase, HemK family [Arthrobacter chlorophenolicus
           A6]
          Length = 281

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 90/238 (37%), Gaps = 24/238 (10%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA----------L 86
            L + + R +    +  ILGW +F   R+ +    F PR  TELLV  A          L
Sbjct: 29  ELADCVRRRVAGLPLEYILGWAEFDGHRMAVRPGVFVPRRRTELLVRLAAGLMSGEGNLL 88

Query: 87  AFSLPRIEKRDVV--------------RILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
               P                       ++DL  G+GAV  AL +  P  +   VDI   
Sbjct: 89  KGVFPADSTFAGAAAVQGSLRSASFDGVVVDLCCGSGAVGAALARRFPRAELHAVDIDSV 148

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E A+SN    G       L      S+     ++  N PY+ +  +  +  E R  +P
Sbjct: 149 AVECARSNVEAVGGHVHTGDLFDALPCSLRSRVHILAVNAPYVPTEAIKTMPPEARVHEP 208

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +SLDGG DGL  +R +A G    L   G   +E    Q      +  +  L +    
Sbjct: 209 LLSLDGGTDGLDFHRRVAAGAKDWLAPHGCVLIETSEQQAGGTAALMAATGLSVTTVR 266


>gi|293363670|ref|ZP_06610420.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma alligatoris A21JP2]
 gi|292552777|gb|EFF41537.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma alligatoris A21JP2]
          Length = 234

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 24/243 (9%)

Query: 28  SVLDDRQRFFLTN-----AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            ++ +++R+ L        I +  K   I +I+G+ ++ NV++ L+     PR ETE LV
Sbjct: 6   QLIKEKRRYGLKQTVSFFEIKQIAKRVPIQKIIGYVEYANVKINLNHKVLIPRYETEELV 65

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
              L+        ++ + ILDL +G+G + +AL K    F     DI  +A+  ++ N++
Sbjct: 66  YLILS------RHKENIDILDLCSGSGFIGIALKKNQKCFNITLADIDNEAILQSQENSI 119

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N    + + +QSD F ++   FD+IVSNPPY+       +   V D++P  +L     G
Sbjct: 120 LN--DAKVEIIQSDLFKNINKRFDIIVSNPPYLMKNE--EISKSVLDYEPHHALYASDQG 175

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGNDRV 259
           L  Y+ I +    +LNK+G    EI          I    KL     +    D  G  R 
Sbjct: 176 LYFYKKIINSAKDYLNKNGKIYFEINPLH------ILYWEKLSLQINLEIINDINGLARF 229

Query: 260 LLF 262
           ++ 
Sbjct: 230 VVI 232


>gi|269219854|ref|ZP_06163708.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269210759|gb|EEZ77099.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 306

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/276 (26%), Positives = 105/276 (38%), Gaps = 31/276 (11%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        G+        P +     +R   + A+ R    E +  I G   F  + L
Sbjct: 28  DARELAEFAAGVRRL-----PAADPTPDERAMFSRAVARRAAREPLQHITGRMYFRWLEL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 F  RPETE +   A+  +    ++ +  R+LDL TG+GA+ LA+  E P    V
Sbjct: 83  VSRPGAFIVRPETEAVAQDAVDEARRIADRGERPRVLDLCTGSGAIALAVATEVPGSAVV 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----------------------G 163
           GVD S +AL++A+ N    G    F    +  FS                         G
Sbjct: 143 GVDASAEALQVARENNAAYGGPVEFVLADALEFSCAHEPDVREDPGASESGALGSGGARG 202

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGL 222
            FDV+V+NPPY+ +     L  EV   DP  +L  GG DGL     +    +  L   GL
Sbjct: 203 KFDVVVANPPYVPARC--ELSPEVLA-DPAAALWGGGEDGLDMPNALVKKAAGLLKPGGL 259

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             +E    Q   + R+             D  G  R
Sbjct: 260 LVMEHAEEQAEPLRRLALKTGFVKAETRADLAGRPR 295


>gi|313672262|ref|YP_004050373.1| protein-(glutamine-n5) methyltransferase, release factor-specific
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939018|gb|ADR18210.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Calditerrivibrio nitroreducens DSM 19672]
          Length = 275

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 20/259 (7%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRL 65
           +  F+  + G+    +       +   +       IVR + +   +  +   R+F+    
Sbjct: 26  AREFVSYLLGVDYKDLHNHLSRKI---ELRGYKKFIVRKVFEGYPVSYVTKSREFFGYEF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ETE+LV+ AL   + +       ++LD+ TG+G +    L +     G+
Sbjct: 83  YVDERVLIPRHETEILVEEALKIDIKK------PKVLDICTGSGVILATYLLKKGDATGL 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVD 181
           GVDIS  ALE+A  N     + +R   +  D  S ++ +    FD+I+ NPPYI      
Sbjct: 137 GVDISLPALEVAMINLRKYNLLDRACLVCLDAVSDLDSVKISEFDIILCNPPYISKSEK- 195

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V  ++P  +L    DG   Y+ +   + +   +D +   EIG     ++ +IF  
Sbjct: 196 -LSNSVL-YEPHNALFAEDDGYYFYKKLLRILYKSCKEDTIIFFEIGDGMSEELKKIFSG 253

Query: 242 RKLFLVNAFKDYGGNDRVL 260
           +    ++  +DY G  RVL
Sbjct: 254 K---EISFIEDYAGKKRVL 269


>gi|88703454|ref|ZP_01101170.1| Hypothetical adenine-specific methylase [Congregibacter litoralis
           KT71]
 gi|88702168|gb|EAQ99271.1| Hypothetical adenine-specific methylase [Congregibacter litoralis
           KT71]
          Length = 321

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 6/223 (2%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV DD     L     R L+ + +  + G   F  +          PR     L+ +  A
Sbjct: 78  SVSDDGWATTLAWLQERILERKPLPYVTGRAWFAGLEFLCDERALVPRSPLAELIRNNYA 137

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
              P         +LDL  G G + +A     P  + V  DI   AL +A+ N   + V+
Sbjct: 138 ---PWWTGESPQSLLDLCCGGGCIGIAAAVHQPNLEVVIADIDEAALTLARENIGLHKVA 194

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R    QSD    ++G  FD+I+ NPPY+++  +  +  E    +P ++L  G DGL   
Sbjct: 195 ARVSAAQSDLLDDLQGSRFDIILCNPPYVDAEDLAAMPAEFLA-EPPLALGSGSDGLDIS 253

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           R +   V  +L   GL  +E+G +    +        L  +  
Sbjct: 254 RRLLRNVGDYLTPRGLLFLEVGNSW-EALDSELAGLPLTWIEF 295


>gi|213648796|ref|ZP_03378849.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 179

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 69/185 (37%), Positives = 99/185 (53%), Gaps = 8/185 (4%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +   ++ L D Q+  L   + R  + E I  + G R+F+++ L +S  T  PRP+TE LV
Sbjct: 1   MAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLV 60

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           + ALA            RILDLGTGTGA+ LAL  E P  +   VD    A+ +A  NA 
Sbjct: 61  EQALARL-----PVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAE 115

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              +      LQS WFS++ G  FD+IVSNPPYI++        +VR F+PR +L    +
Sbjct: 116 HLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGDVR-FEPRSALVADEN 173

Query: 202 GLSHY 206
           G++  
Sbjct: 174 GMADL 178


>gi|54025403|ref|YP_119645.1| putative methyltransferase [Nocardia farcinica IFM 10152]
 gi|54016911|dbj|BAD58281.1| putative methyltransferase [Nocardia farcinica IFM 10152]
          Length = 263

 Score =  187 bits (477), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 8/205 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + + +    +  ++GW +F  +R+ +    F PR  T  LVD+ALA +    E+  
Sbjct: 38  LAELVRQRVSGTPLEYVVGWAEFRGLRVAVRPGVFVPRRRTAFLVDTALAVAR---ERPG 94

Query: 98  VVRILDLGTGTGAVCLALL----KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            + ++DL  G GA+ LA            +    D+   A+  A+ N   +G     D  
Sbjct: 95  TLCVVDLCCGCGALGLAFATEMRAHGRTVELTAADVDPTAVCCARGNLAGHGTVHEGDLF 154

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +   + + G  D++++N PY+ +  +  +  E RD +PR +LDGG DGL  +R +A   
Sbjct: 155 DA-LPTDLRGRIDILLANVPYVPTAGIAGMPPEARDHEPRAALDGGADGLDVFRRVAAAA 213

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRI 238
              L   G    E    Q       
Sbjct: 214 PDWLAPGGTVFFESSREQATAASDF 238


>gi|288922983|ref|ZP_06417140.1| modification methylase, HemK family [Frankia sp. EUN1f]
 gi|288345659|gb|EFC80031.1| modification methylase, HemK family [Frankia sp. EUN1f]
          Length = 362

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 62/298 (20%), Positives = 99/298 (33%), Gaps = 44/298 (14%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V  +S  ++ +     +D      L   + R      +  + G   F  + +
Sbjct: 53  DAEQLAAHVLEVSRGRLALV--DRIDAAAAAELRALVERRAGRVPLQHLTGVAGFRRLDI 110

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +    F PRPETE +V+ AL         R V   +DL +G+GA+ LAL  E P  +  
Sbjct: 111 AVGPGVFIPRPETEWVVEGALEALRSLAVARPVC--VDLCSGSGAIALALADELPAAQVH 168

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDW-------------------------FSS 160
            V++   AL   + N    G+                                     + 
Sbjct: 169 AVEVEPSALGWLRRNVERTGLPVHVHHADVGISADADADAYTGGGAGRPSAPPVRVALAD 228

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  D++VSNPPY+       +  EV   DP  +L GG DGL   R +    +  L   
Sbjct: 229 LAGRVDLVVSNPPYLPDRDRALVEPEVGRHDPPAALWGGPDGLDGPRAVVAAAAALLRPG 288

Query: 221 GLCSVEIGYNQKVDVVRIFESRK---------------LFLVNAFKDYGGNDRVLLFC 263
           G+  +E        V  +                       +    D  G DR +   
Sbjct: 289 GVLVMEHADEHGQAVPALLAEGGPAASGPSGGAGWASPWSHIVDHPDLAGRDRFVTAR 346


>gi|121604711|ref|YP_982040.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Polaromonas naphthalenivorans CJ2]
 gi|120593680|gb|ABM37119.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 298

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 9/263 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDF 60
            A  ++   +    GL    +    +  +    +  +   +  R    +    +      
Sbjct: 39  NAFDEAAWLVLWKLGLELDDLESVENRPVSPEDQAQVALLVDTRIATRKPAAYLTHEAWL 98

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             V   +      PR     L+D     S+      +  R+LDL TG G++ +      P
Sbjct: 99  MGVPFYVDERVIIPRSFIAELLD---DGSIDDWLSDETQRVLDLCTGNGSLAILAAMTYP 155

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  DIS  AL +A+ N   + ++ R   ++SD  ++  G +D+I+ NPPY+ +  +
Sbjct: 156 EVVVDAADISPDALAVARINVDRHQLASRITLIESDGLANCPGGYDLILCNPPYVNAASM 215

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P ++L GG DG+   R++    +  +N++ +  +EIG N++ +  R F 
Sbjct: 216 AALPAEFRA-EPGLALAGGADGMDFIRSLFLNAAAQMNENAVLVLEIG-NERENFERAFP 273

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
             K F         G+D+VLL  
Sbjct: 274 HLKPFWFET---SAGSDQVLLLT 293


>gi|195343026|ref|XP_002038099.1| GM17937 [Drosophila sechellia]
 gi|194132949|gb|EDW54517.1| GM17937 [Drosophila sechellia]
          Length = 298

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 26/255 (10%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V       V    D + L+  Q   L   +        +  I+G  DF ++ L  S
Sbjct: 61  IVSHVLKQKFSAVPDSYDQLQLNPGQLADLERFLEARCARMPLQHIIGEWDFMDITLKTS 120

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  +   +       +    V +L++G G+GA+ L++L   P      ++
Sbjct: 121 PSVFIPRPETEEFMRLVIDDH----KNAKHVDLLEVGCGSGAMSLSMLHSLPQVVATAIE 176

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            S  A  +A  NA   G+  RF+              +  +    Y+  V+ D      +
Sbjct: 177 RSKAATVLAAENAKMLGLLNRFEVH------------NHTMEEDKYLPEVLKD------K 218

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE---SRKLF 245
           +++   +LDGG DGL   R + D   RHL   G   +E+G +    V  I       +L 
Sbjct: 219 NYENLNALDGGSDGLRVARLVFDLACRHLRPGGKLWLELGNDHPPMVKTIMNLKYEGRLK 278

Query: 246 LVNAFKDYGGNDRVL 260
            +  + D    +R +
Sbjct: 279 FIAGYSDQYKRERFV 293


>gi|319762955|ref|YP_004126892.1| protein-(glutamine-n5) methyltransferase, ribosomal protein
           l3-specific [Alicycliphilus denitrificans BC]
 gi|330825035|ref|YP_004388338.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans K601]
 gi|317117516|gb|ADV00005.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans BC]
 gi|329310407|gb|AEB84822.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Alicycliphilus denitrificans K601]
          Length = 307

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 17/271 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD--------DRQRFFLTNAIVRSLKHESIHR 53
            A  ++   +    GL     ++D D+             Q    T    R    +    
Sbjct: 34  NARDEAVWLVLWRLGLP-LDSVLDEDAPDSVANQPVTPASQALVATLFEERIATRKPAAY 92

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +        V   +      PR     ++  A       +  R    +LDL TG G++ +
Sbjct: 93  LTREAWLVGVPFYVDERAIVPRSFIAEIL--ANGSIDDWLTDR-TTNVLDLCTGNGSLAV 149

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                 P  +  G D+S  AL +A+ N   +G+ ER   +QSD  ++V G +D+I+ NPP
Sbjct: 150 LAAMAWPEVRVTGADLSPDALAVARINVERHGLQERIRLVQSDGLAAVPGPWDLILCNPP 209

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ +  +  L  E R  +P ++L GG DG+     +       + +D +  +EIG N++ 
Sbjct: 210 YVNAQSMSELPAEYRA-EPELALAGGGDGMDFIHRLLREAPACMTEDAVLVLEIG-NERA 267

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                F    +F +       G D+VLL  R
Sbjct: 268 HFEAAFPQLPVFWLQT---SAGEDQVLLVTR 295


>gi|312148044|gb|ADQ30703.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi JD1]
          Length = 286

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE L + AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNRHVLIPRFDTECLAEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLENRARALIL 269


>gi|256384223|gb|ACU78793.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385055|gb|ACU79624.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455251|gb|ADH21486.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 282

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 14/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDYKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D A  F    ++  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FINKDVLIPRNESELIIDHASEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVDC 182
             DIS KAL++A  N     ++     L     D         ++I+ NPPYI+      
Sbjct: 139 LTDISYKALKVANKNIKKFNLTNT-SCLNGNFIDVLIKNNLKANLIICNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVVRIFE 240
           +   V DF+P I+L     GL  Y  +   + + L  NK+ L  +E G+ QK  + ++  
Sbjct: 197 IDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKILDTNKNFLIVLEFGWLQKDSIEQLLI 256

Query: 241 SR--KLFLVNAFKDYGGNDR 258
           +   K       KDY    R
Sbjct: 257 NNCLKYKW-EFKKDYNDYWR 275


>gi|224532844|ref|ZP_03673459.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23]
 gi|224512233|gb|EEF82619.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi WI91-23]
          Length = 286

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE LV+ AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNRHVLIPRFDTECLVEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|225548516|ref|ZP_03769564.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a]
 gi|225370779|gb|EEH00214.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 94a]
          Length = 286

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +   L+     PR +TE LV+ AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|221217540|ref|ZP_03589010.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a]
 gi|225549802|ref|ZP_03770766.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a]
 gi|221192603|gb|EEE18820.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 72a]
 gi|225369610|gb|EEG99059.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 118a]
          Length = 286

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +   L+     PR +TE LV+ AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFNLNRHVLIPRFDTECLVEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|160933138|ref|ZP_02080527.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753]
 gi|156868212|gb|EDO61584.1| hypothetical protein CLOLEP_01981 [Clostridium leptum DSM 753]
          Length = 206

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 10/208 (4%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++ L +      PR +T  LV      ++ R++      ILDL  GTGAV L + +E P
Sbjct: 1   MDMELAVGPGVLIPREDTIPLV----LETVQRLKNFSAPVILDLCAGTGAVGLGVARELP 56

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             K + V++S  AL   + N    G   R   ++ D  +  +GL     D +VSNPPYI 
Sbjct: 57  DAKVICVELSPLALPYLERNLSRYG-EGRVRAVKGDVLNGPDGLSLPLVDAVVSNPPYIC 115

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +  +  L  EVR  +PR++LDGG DGLS YR I +     L   G+ +VEIG  Q+  V 
Sbjct: 116 TGELPGLQKEVRQ-EPRLALDGGPDGLSFYRAITNNWLGLLKPGGVAAVEIGNGQENAVA 174

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + ++  +  +   +D  G  RV++  +
Sbjct: 175 DLLKTAGVSQITFSQDITGAIRVVIGNK 202


>gi|291444170|ref|ZP_06583560.1| methytransferase [Streptomyces roseosporus NRRL 15998]
 gi|291347117|gb|EFE74021.1| methytransferase [Streptomyces roseosporus NRRL 15998]
          Length = 266

 Score =  187 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 15/214 (7%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L+    R      +  +LGW +F+  R+ + +  F PR  TE LV  A A +  R   
Sbjct: 42  AELSLLAERRAAGLPLEHVLGWAEFHGRRIAVDAGVFVPRRRTEFLVAQAAALAPRR--- 98

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GA+ +AL            D+   A+  A+ N    G     +  + 
Sbjct: 99  ---AVVVDLCCGSGALGVALATALDRVDLHACDVEPAAVRCARRNVGDLG-----EVYEG 150

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D F  +     G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   R +A 
Sbjct: 151 DLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPRVALDGGGDGLDVMRRVAA 210

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                L   G   +E    Q+   V I  +  L 
Sbjct: 211 EAPAWLAPGGSLLMEASERQRDVAVEILRTAGLT 244


>gi|319779618|ref|YP_004130531.1| Hypothetical adenine-specific methylase yfcB [Taylorella
           equigenitalis MCE9]
 gi|317109642|gb|ADU92388.1| Hypothetical adenine-specific methylase yfcB [Taylorella
           equigenitalis MCE9]
          Length = 313

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVR 64
           ++   +     L    + +  D+++ + ++  + + + + +     +  I G      + 
Sbjct: 45  EAIQLVYSALHLKPVDIDIFLDALVTEDEKTKILDYLNKRIVDRMPLPYITGSAWLQGLE 104

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             ++SD   PR     L+   L      I   +  +ILD+ TG+G + + +    PF + 
Sbjct: 105 FIVNSDVLIPRSFIAELLSQDLFE--QDILNTEPSKILDMCTGSGCLGILVALIYPFAEV 162

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCL 183
            GVDIS  A++IAK N   + V   F  + SD FS + +  +D+I+ NPPY+ SV +  L
Sbjct: 163 DGVDISDAAIKIAKLNKDKHNVQ-NFHPIVSDLFSFNPDYKYDLIICNPPYVNSVSMQNL 221

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             E   ++P+++L GG  G+   +          + +    +EIG
Sbjct: 222 PPEY-GYEPQLALAGGEKGMDTIKRFLTEALNFTHDNTSIILEIG 265


>gi|195941928|ref|ZP_03087310.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi 80a]
 gi|216264489|ref|ZP_03436481.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a]
 gi|223889246|ref|ZP_03623834.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b]
 gi|226320938|ref|ZP_03796486.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805]
 gi|215980962|gb|EEC21769.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 156a]
 gi|223885279|gb|EEF56381.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 64b]
 gi|226233640|gb|EEH32373.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi 29805]
          Length = 286

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE L + AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLENRARALIL 269


>gi|71274842|ref|ZP_00651130.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71901443|ref|ZP_00683532.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|170729912|ref|YP_001775345.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Xylella fastidiosa M12]
 gi|71164574|gb|EAO14288.1| Modification methylase HemK [Xylella fastidiosa Dixon]
 gi|71728782|gb|EAO30924.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|167964705|gb|ACA11715.1| Site-specific DNA-methyltransferase (adenine-specific) [Xylella
           fastidiosa M12]
          Length = 308

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 105/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 36  NALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECVLALFERRVTERVPVAYLTGDAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 96  AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +   G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 153 HWSVDGADISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V ++ 
Sbjct: 212 TDALPQEY-GYEPELGLRAGPDGLNLVLKILRDAPAHLDEEGLLICEVGESEQQLV-QLL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PQVDFAWVEF 279


>gi|313665081|ref|YP_004046952.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma leachii PG50]
 gi|312949565|gb|ADR24161.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma leachii PG50]
          Length = 282

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 12/259 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +   +   ++ + D VL  +Q + L        K   +  IL  + FY+   
Sbjct: 23  DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLDQIWKLLEKKYPLAYILKNKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D    F    I+  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FINKDVLIPRSESELIIDYVSEF----IKNNNNLLIVDLCTGSGCLGISCALLNKQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DIS KAL++A  N     +      L  D+ + +       +VI+SNPPYI+      
Sbjct: 139 LTDISYKALKVANKNIKRFNLKNT-TCLSGDFINVLIKDNIKANVIISNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFE 240
           L   V +++P I+L     GL  Y  +   + +   +NK  L  +E G+ QK  + ++  
Sbjct: 197 LDKNVIEYEPSIALFAPNKGLYFYEILIKNIDKIVDVNKKFLIVLEFGWLQKDSIEQLLI 256

Query: 241 SRKL-FLVNAFKDYGGNDR 258
              L +  +  KDY    R
Sbjct: 257 KNCLKYNWDFKKDYNNYWR 275


>gi|239940731|ref|ZP_04692668.1| putative methylase [Streptomyces roseosporus NRRL 15998]
 gi|239987209|ref|ZP_04707873.1| putative methylase [Streptomyces roseosporus NRRL 11379]
          Length = 263

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 92/214 (42%), Gaps = 15/214 (7%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L+    R      +  +LGW +F+  R+ + +  F PR  TE LV  A A +  R   
Sbjct: 39  AELSLLAERRAAGLPLEHVLGWAEFHGRRIAVDAGVFVPRRRTEFLVAQAAALAPRR--- 95

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GA+ +AL            D+   A+  A+ N    G     +  + 
Sbjct: 96  ---AVVVDLCCGSGALGVALATALDRVDLHACDVEPAAVRCARRNVGDLG-----EVYEG 147

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D F  +     G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   R +A 
Sbjct: 148 DLFDPLPARLRGRVDVLLANVPYVPTADVELLPAEARVHEPRVALDGGGDGLDVMRRVAA 207

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                L   G   +E    Q+   V I  +  L 
Sbjct: 208 EAPAWLAPGGSLLMEASERQRDVAVEILRTAGLT 241


>gi|37527438|ref|NP_930782.1| hypothetical protein plu3566 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786873|emb|CAE15939.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 283

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/257 (23%), Positives = 97/257 (37%), Gaps = 17/257 (6%)

Query: 7   SHSFLCRVTGLS-SHQVIVDPDSVLD----DRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   L           +    D  L+    DR R     A+        +  I+G  DF 
Sbjct: 14  ARKLLSEADVWDVETDLTCLIDRYLERRCKDRARDEFMLAVHERCNRIPLGHIVGTVDFD 73

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + LT+ +  F PRP +++       +     +      +LDL +G+GA+ LA+ K  P 
Sbjct: 74  GLPLTVGTGVFIPRPHSQV----IHKWLENEYQAPHGAVVLDLCSGSGAIGLAIAKRRPD 129

Query: 122 FKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDW-----FSSVEGLFDVIVSNPPYI 175
            K   V+    A +    N       + + D L++D      FS   G   +IV+NPPY+
Sbjct: 130 LKVTCVEYDDVAFQYLTRNIYRLANWAIKADALKADLRDWQAFSQFNGSVALIVANPPYV 189

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                  +  E  +  P  S+  G DGL   R I     + L  +G   +E G +Q   V
Sbjct: 190 PEQ--QEILPEWEEHHPYASVYSGDDGLDLARLIIKQAKQLLQSEGWLVIEHGESQGESV 247

Query: 236 VRIFESRKLFLVNAFKD 252
             +F       V    D
Sbjct: 248 RALFSDVGFSSVRTIID 264


>gi|221124898|ref|XP_002156820.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Hydra magnipapillata]
          Length = 551

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 61/237 (25%), Positives = 101/237 (42%), Gaps = 21/237 (8%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D        +   R L  E +  ++   DF  + L++    F PRPETE           
Sbjct: 321 DKNADAIFNSLCTRRLNREPLQYLIEEWDFRLMTLSMKKPVFIPRPETE----------- 369

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P ++K    + L++G G+GA+ LA L E    + + +D +  A+ + + NA   GV++R 
Sbjct: 370 PYLKKDS--KFLEVGCGSGAISLAFLTELSTVRCIALDKNQDAVSLTQENAQKLGVADRI 427

Query: 151 DTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + L           +    FD+++SNPPYI    +  L  EV+ ++   +LDGG DGL  
Sbjct: 428 NVLHKTLDELTLLDAGGEKFDMLISNPPYIPHKEMAFLQEEVKIYEHHDALDGGYDGLEV 487

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR---KLFLVNAFKDYGGNDRV 259
            R+I     + +   G   +E+  +    +     S     L  V  F D     R 
Sbjct: 488 IRSILRSAHKFVCSQGYVWLEVDVSHPTMIEEFVLSNPSIGLKFVLTFNDCYNRPRF 544


>gi|319760622|ref|YP_004124560.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia
           vafer str. BVAF]
 gi|318039336|gb|ADV33886.1| uncharacterized adenine-specific methylase [Candidatus Blochmannia
           vafer str. BVAF]
          Length = 298

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 10/223 (4%)

Query: 28  SVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           S L  ++R  +   +   + K   +  +     F N+   +++  F PR     L+ S  
Sbjct: 56  SCLSKKERALIIKLVNLRVQKRIPVPYLTNKAWFCNLEFYVNNQVFIPRSPIGELIMSNF 115

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTNG 145
              LP         ILD+ TG+G + +A+     P  +   VD+S KAL+IA+ N     
Sbjct: 116 HDILPT----PPKHILDMCTGSGCIAIAIAMIMYPHSEIDAVDLSIKALQIAEYNIKLYN 171

Query: 146 VSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  +   + S+ F ++     +D+IV NPPY+    +  L  E    +P +SL    +GL
Sbjct: 172 LENQIIPIHSNLFKNIPKFKKYDLIVINPPYVNKADICNLPEEYL-HEPILSLSANCNGL 230

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                I   ++ +LN +G+   E+G  Q  ++ + +E+     
Sbjct: 231 EIIHQIFIQITDYLNTNGVLVCEVGNTQ-NELKKYYENIPFHW 272


>gi|260219431|emb|CBA26276.1| Uncharacterized adenine-specific methylase NMA1912 [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 300

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 20/274 (7%)

Query: 2   QALRDSHSFLCRVTGLSS----HQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILG 56
            A  ++   +    GL          V+ +  +   +       +  R    +    +  
Sbjct: 27  NAADEAAWLVLHALGLPLDTGLSDEDVESNRPVAPEEYARAATLLGARISTRKPAAYLTQ 86

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                 V   +      PR     L VD ++ + L    K     +LDL TG G++ +  
Sbjct: 87  EAWLQGVPFYVDERVIVPRSLIAELLVDGSIDYWL----KESTHHVLDLCTGNGSLGILA 142

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               P  +  G DIS  AL +A+ N   + +  R   L+SD   ++ G+FD+++ NPPY+
Sbjct: 143 TMVYPDVEVTGADISADALAVARVNVDKHRLQNRMKLLESDGLKAIPGVFDLVLCNPPYV 202

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGI-----DGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +  +  L  E    +P I+LDG       DG+   RT+  G+   L+ DG+  +EIG N
Sbjct: 203 NAKSMAALPAEYLA-EPFIALDGNQAGGSGDGMDFIRTLLAGLPPKLSDDGVLVLEIG-N 260

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++      F   ++  +       G D+VLL  R
Sbjct: 261 EREYFEAAFPELEVVWLET---SAGEDQVLLLTR 291


>gi|121594426|ref|YP_986322.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Acidovorax sp. JS42]
 gi|120606506|gb|ABM42246.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Acidovorax sp. JS42]
          Length = 309

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 19/274 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP------DSVLDDRQRFFLTNAIVRSLK-HESIHRI 54
            A  ++   +    GL    V+ +       +  +    +  +       +   +    +
Sbjct: 34  NAQDEAAWLVLWRLGLPLDSVLDEGAEGSVANRPVTPAHQALVATLFEERIATRKPAAYL 93

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
                   V   +      PR     L+      S+          +LDL TG G++ + 
Sbjct: 94  TREAWLQGVPFYVDERAIVPRSFIAELL---ADGSIDDWLSDQTRHVLDLCTGNGSLAVL 150

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                P  +  G D+S  AL +A+ N   +G+ ER   ++SD  +++ G +D+I+ NPPY
Sbjct: 151 AAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAALRGPWDLILCNPPY 210

Query: 175 IESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           + +  +  L  E R  +P ++L     GG DG+   R +       +++D +  +EIG N
Sbjct: 211 VNAASMAQLPPEYRA-EPELALSGNMRGGSDGMDFIRQLLADAPARMSEDAVLVLEIG-N 268

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++      F    +F +       G+D+VLL  R
Sbjct: 269 EREHFEAAFPDLPVFWLET---SAGSDQVLLLTR 299


>gi|317125569|ref|YP_004099681.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Intrasporangium calvum DSM 43043]
 gi|315589657|gb|ADU48954.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Intrasporangium calvum DSM 43043]
          Length = 291

 Score =  186 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 12/268 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDP--DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           D+      V G+++H+V         L D         +    +   +  + G   F  +
Sbjct: 26  DAVELAAHVLGVAAHEVRRRMIVGGSLPDSFDEAYAAVLAERARRVPLQHLTGRAPFRTL 85

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFF 122
            L +    F PRPETE++V+ ALA     +  R   +R++DL +G+GA+ LA+  E P  
Sbjct: 86  TLHVGPGVFVPRPETEVVVELALAEVDRLLGTRPSGIRLVDLCSGSGAIALAVKTERPRV 145

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESV 178
               +++S  A+  A +N    G+      LQ D          G  D++ +NPPYI S 
Sbjct: 146 HVRAIELSGDAVAWATANRDRLGLD--VAILQGDATEPAIPDWSGSVDLVTANPPYIPSD 203

Query: 179 IVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-V 236
            V  +  EVRD DP ++L GG  DGL+    +A   +  L   GL  +E    Q   +  
Sbjct: 204 AVP-VDPEVRDHDPEVALYGGSEDGLAIPLRVAAAAAELLGPGGLLLMEHADTQGESLPA 262

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R+  + +   V    D  G  RV    R
Sbjct: 263 RLLSTGQWSFVVDHVDLSGRPRVTAARR 290


>gi|71899856|ref|ZP_00682005.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
 gi|71730373|gb|EAO32455.1| Modification methylase HemK [Xylella fastidiosa Ann-1]
          Length = 308

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/250 (24%), Positives = 106/250 (42%), Gaps = 8/250 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            AL ++   +     L          + L   ++  +     R +     +  + G   F
Sbjct: 36  NALDEATQLVLHALHLPPDLGPAYGQARLLRTEKECILALFERRVTERVPVAYLTGDAWF 95

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +    PR     L+ +      P +  RDV   LDL TG+G + +A+   +P
Sbjct: 96  AGLNFKSDARALVPRSPIAELIQAGFE---PWLAGRDVRHALDLCTGSGCIAIAMGHYNP 152

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            ++  G DIS  AL +A  N V   ++   + ++SD F+ + G  + +IVSNPPY+    
Sbjct: 153 HWRVDGSDISEDALSLALENKVRL-LAHNVELIKSDVFAGLVGRRYQLIVSNPPYVTDAE 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            D L  E   ++P + L  G DGL+    I      HL+++GL   E+G +++  V ++ 
Sbjct: 212 TDALPQEY-GYEPELGLRAGPDGLNLVLKILCDAPAHLDEEGLLICEVGESEQQLV-QLL 269

Query: 240 ESRKLFLVNA 249
                  V  
Sbjct: 270 PQVDFAWVEF 279


>gi|319943844|ref|ZP_08018125.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC
           51599]
 gi|319743077|gb|EFV95483.1| protein-(glutamine-N5) methyltransferase [Lautropia mirabilis ATCC
           51599]
          Length = 355

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 64/281 (22%), Positives = 109/281 (38%), Gaps = 28/281 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVR 64
           ++   +C    L   Q     ++ L   +R  L N I    +  + +  ++G       R
Sbjct: 66  EAVWLVCWCLHLPVEQYDELANATLLPDERRKLRNLIDARAQCDQPLAYLIGEAWLMGFR 125

Query: 65  LTLSSDTFEPRPETEL-LVDSALAFSLPR--------------------IEKRDVVRILD 103
               +    PR      LV+ A    L R                           R+LD
Sbjct: 126 FRADARALVPRSLLAEALVNHAFDPWLNREMLQPFHDLAEELDQGLGAQPPASAPYRVLD 185

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           L TG G++ +      P  + V  DIS  AL++A  N    G+  R   +Q D F +++G
Sbjct: 186 LCTGGGSLAIIAAHYLPDSEVVASDISADALQLAAENIADYGLENRIRLVQGDLFQNLQG 245

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             F +I+ NPPY+ +  +  L  E R  +P  +L  G DG+     +      HL   G+
Sbjct: 246 ESFKLILCNPPYVNAESMAALPSEYRA-EPEKALGSGPDGMDLITRLLHEAPEHLWPCGV 304

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            ++EIG+    +    F +     +   +   G+DR++L  
Sbjct: 305 LALEIGHE-MPNFQARFPTLTWTSIPVAQ---GDDRIVLIT 341


>gi|256393897|ref|YP_003115461.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
 gi|256360123|gb|ACU73620.1| modification methylase, HemK family [Catenulispora acidiphila DSM
           44928]
          Length = 257

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 7/215 (3%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D      L   + R    E +  ++GW +F  +R+ +    F PR  +E LV+ AL    
Sbjct: 31  DAEPARRLEALVARRCAGEPLEHVVGWAEFCGLRIGVGPGVFVPRRRSEFLVELALDL-- 88

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                R+   ++DL  G+      L       +    DI    L  A+ N    G +   
Sbjct: 89  ----GREARVVVDLCCGSAPFATVLAARLSGAEVHAADIDPAQLAYARENLGRRGSTHEG 144

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           D  ++     + G  D++V N PY+ +  +  L  E R F+P  SLDGG DGL+ +R +A
Sbjct: 145 DLYEA-LPERLRGKVDLLVVNAPYVPTDALSTLPAEARVFEPAASLDGGADGLAVHRRVA 203

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           DG  + L   G   +E    Q   ++  F    L 
Sbjct: 204 DGAPQWLAPRGHLLIETSEAQAEAMLEAFGEAGLK 238


>gi|66816847|ref|XP_642405.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4]
 gi|60470445|gb|EAL68425.1| hypothetical protein DDB_G0278505 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 39/299 (13%)

Query: 3   ALRDSHSFLCRVTGLSSH--QVIVD----PDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +  +S   +  V  ++ H  Q  +        ++ + +   L + I R L +E I+ I+G
Sbjct: 43  SELESKLLVSHVLKINDHNDQYQLFNKKVQSRIISNEEYNQLQSFIERRLNNEPINYIIG 102

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +R F+  +   +  T  PRP++E            + ++  + +ILDLGTGTG + L+ L
Sbjct: 103 YRYFWKNKFFCNHSTLIPRPDSET--IIEKIIEESKEKELKIKKILDLGTGTGCLLLSTL 160

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------------------- 157
            E     GVG+D S +AL IA  NA+   + +R   L  DW                   
Sbjct: 161 NEFKDSIGVGIDKSNEALIIANKNAIELSLDKRVSLLNFDWNNYDKNQISKLLSSPSSSS 220

Query: 158 -------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                   +     FD+++SNPPYI +     L   V +++P+ +L    +GL  Y++IA
Sbjct: 221 PSSSSNTNNENNEKFDLVISNPPYISNEEFKYLNPIVTEWEPKTALIADENGLKDYKSIA 280

Query: 211 DGVSR----HLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
             ++      L+ + L   EIG  Q+ D+  I E++     +   KD     R L+F +
Sbjct: 281 SFLNENKDSLLSDNCLIVFEIGKGQEKDIQSIMENKYSFKYIGYKKDLNSIIRCLVFMK 339


>gi|229589292|ref|YP_002871411.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
 gi|229361158|emb|CAY48021.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
          Length = 286

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/242 (23%), Positives = 90/242 (37%), Gaps = 18/242 (7%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +    V  D    LD+        A+        +  I+G   F  + L + S  F PRP
Sbjct: 34  VDRFIVRADKQRALDE-----FRLAVSERCNRIPLGHIVGTVAFDELSLVVGSGVFIPRP 88

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            +     + +   L   E      +LDL  G+GA+ LA+ +  P      V+    A+  
Sbjct: 89  HS-----TVIHKWLDETELATGTCVLDLCAGSGAIGLAIARRRPDLDVTCVEREDVAVNY 143

Query: 137 AKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            K N              + D   +  F+       +IV+NPPY+       L  E  D 
Sbjct: 144 LKRNIARLATKNVQVSAAQADVYDTKAFARFRQQVGLIVANPPYVPQ--KAQLQPEWGDH 201

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            P+ ++  G DGL   R I    +  L  DG   +E G +Q   V  +FE  +L  +   
Sbjct: 202 HPKAAVYSGTDGLDLTRQIITLATTLLTPDGWLVIEHGEDQASAVRELFEQHQLTEIRTV 261

Query: 251 KD 252
            D
Sbjct: 262 ID 263


>gi|222111086|ref|YP_002553350.1| n5-glutamine s-adenosyl-l-methionine-dependent methyltransferase
           [Acidovorax ebreus TPSY]
 gi|221730530|gb|ACM33350.1| methyltransferase small [Acidovorax ebreus TPSY]
          Length = 309

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/274 (21%), Positives = 110/274 (40%), Gaps = 19/274 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDP------DSVLDDRQRFFLTNAIVRSLK-HESIHRI 54
            A  ++   +    GL    V+ +       +  +    +  +       +   +    +
Sbjct: 34  NAQDEAAWLVLWRLGLPLDSVLDEGVEGSVANRPVTPAHQALVATLFEERIATRKPAAYL 93

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
                   V   +      PR     L+      S+          +LDL TG G++ + 
Sbjct: 94  TREAWLQGVPFYVDERAIVPRSFIAELL---ADGSIDDWLSDQTRHVLDLCTGNGSLAVL 150

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                P  +  G D+S  AL +A+ N   +G+ ER   ++SD  +++ G +D+I+ NPPY
Sbjct: 151 AAMAYPDVQVTGADLSPDALAVARINVERHGLQERITLVESDGLAALPGPWDLILCNPPY 210

Query: 175 IESVIVDCLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           + +  +  L  E R  +P ++L     GG DG+   R +       +++D +  +EIG N
Sbjct: 211 VNAASMAQLPPEYRA-EPELALSGNMRGGRDGMDFIRQLLADAPARMSEDAVLVLEIG-N 268

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++      F    +F +       G+D+VLL  R
Sbjct: 269 EREHFETAFPDLPVFWLET---SAGSDQVLLLTR 299


>gi|47459024|ref|YP_015886.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K]
 gi|47458352|gb|AAT27675.1| protoporphyrinogen oxidase [Mycoplasma mobile 163K]
          Length = 236

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 17/238 (7%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHE-----SIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           + +L +++R+ L   I             I +I+G+ +  NV + ++     PR ETE L
Sbjct: 5   EDLLKEKRRYKLKEEISEKELKMLNLNFPIQKIMGFIEMQNVIVHVNHFVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +  A  +    +E  + + +LDL +G+G + LA+ K  P    +  DIS +++   + N 
Sbjct: 65  ILEAYKY----LENNNNLDVLDLCSGSGFIALAIKKHFPKINVMASDISEESIRQIQENV 120

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N +      L+SD F  +E  FD+IVSNPPY+     + L   V  ++P ++L    +
Sbjct: 121 AINNLD--IFFLKSDLFEKIEKKFDLIVSNPPYLSH--KNVLDESVSKYEPHLALFAKKE 176

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G      I     + L  +G+  +EI  ++    V+         V+  KD     R+
Sbjct: 177 GFEIIEKIIFSAKKFLKSNGVLLLEIDTDK----VKFINKIDFIQVSYLKDINNKTRI 230


>gi|92118609|ref|YP_578338.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrobacter hamburgensis X14]
 gi|91801503|gb|ABE63878.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 343

 Score =  186 bits (472), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 6/252 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
             + ++   +     L   +V  +    V     R  L     R    +    ++     
Sbjct: 66  DPVAEAAFLVGEAMHLHPDEVEPLAARRVPKAAGRRILGWIEQRIATRKPAAYLVNRMYM 125

Query: 61  YNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +   +      PR     L+DS       L   +   V R+LDL TG+G + +   + 
Sbjct: 126 RGMAFYVDERVIVPRSFIGELLDSHFGGDDVLRLRDPATVTRVLDLCTGSGCLAILAARA 185

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
            P       D+S  AL +A+ N   + + +R    Q D F++V G  +D+I+SNPPY+++
Sbjct: 186 FPNATVDAADLSADALTVAERNVQEHRLEDRIQLAQGDLFAAVSGKRYDLIISNPPYVDA 245

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E    +PR++ DGG DG+   R I DG   HL   G    E+G   K  + +
Sbjct: 246 QGMASLPHECLA-EPRMAFDGGADGIDLVRRIIDGAKTHLASGGGLLCEVG-RCKPAIEK 303

Query: 238 IFESRKLFLVNA 249
            +    L  ++ 
Sbjct: 304 AYPRADLLWLDT 315


>gi|50365448|ref|YP_053873.1| polypeptide chain release factor methylase [Mesoplasma florum L1]
 gi|50364004|gb|AAT75989.1| polypeptide chain release factor methylase [Mesoplasma florum L1]
          Length = 300

 Score =  185 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 133/269 (49%), Gaps = 15/269 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   +  +T +   +V+   + VL+ +Q   +     +  K + +  ILG++ F   ++
Sbjct: 37  DAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGKPLAYILGYKIFRTHKI 96

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--K 123
            ++ +T  PR ETEL+VD    F   + EK   + +LDL  G+G + +++  E+      
Sbjct: 97  LVNKNTLIPRMETELIVDYVNEFINSQNEK---ISVLDLCCGSGCIGISIAIENKDKMEN 153

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIV 180
               DIS KAL I   N   N +      ++SD+ +S+   +  F+++V NPPYI+   V
Sbjct: 154 VTFSDISKKALNITSKNIENNNLVNWTKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDV 213

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVVRI 238
           D +    + ++P+++L    +GL  Y+     + + +   K+ L   EIG+ Q+ ++  +
Sbjct: 214 D-VDKMTKKYEPKLALFAKDNGLFFYKEAIKNIDKFMDITKNILIVFEIGWKQEKEL-DV 271

Query: 239 FESRKL---FLVNAFKDYGGNDRVLLFCR 264
           F  ++L   +     KDY  N R L+  +
Sbjct: 272 FLKQELGLKYKWKFEKDYFNNLRYLILTK 300


>gi|320096083|ref|ZP_08027683.1| HemK family modification methylase [Actinomyces sp. oral taxon 178
           str. F0338]
 gi|319976963|gb|EFW08706.1| HemK family modification methylase [Actinomyces sp. oral taxon 178
           str. F0338]
          Length = 293

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 12/268 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+ + +    G  S         +L   +   L  A+    +   +  I G   F +
Sbjct: 27  PAADARALVEWACGADSLW---SAPPLLAPEEVERLRGAVSARARRVPLQHITGRMHFRS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L  +   F  RPETE +  +A+  +   + +R    ++DL +G+GA+ +A+  E P  
Sbjct: 84  LALRAAPGVFVVRPETECVAQAAIDRARTAVGRRGSATVVDLCSGSGAIAIAVATEVPGC 143

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIES 177
           +   V+    A  +A SN        R + L +D       + ++G  DV+VSNPPY+ +
Sbjct: 144 RVWAVEADEAAARLAASNIGAL-APGRVELLLADATDGAALAHLDGSADVVVSNPPYVPA 202

Query: 178 VIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             +      + D  P  +L GG  DG +  R +A      L   G   +E   +Q   + 
Sbjct: 203 DEMPDQPEALAD--PAGALYGGSPDGTAVPRLVARRALGLLAPGGALVMEHSPSQSAAMR 260

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R  ES      +  +D  G DR L+  R
Sbjct: 261 RAAESLGYCCASTHRDLAGRDRYLVAER 288


>gi|295698658|ref|YP_003603313.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Candidatus Riesia pediculicola USDA]
 gi|291157335|gb|ADD79780.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Candidatus Riesia pediculicola USDA]
          Length = 190

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 67/194 (34%), Positives = 92/194 (47%), Gaps = 9/194 (4%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            PRPETE LV+ AL  +     K+  ++ILDLG G G + LAL KE      VG DI   
Sbjct: 2   IPRPETEHLVELALKLA----NKKKGLKILDLGAGAGPISLALAKELQSSFIVGTDIDES 57

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRD 189
            + IA++NA    +      L+S+WF         FD+IVSNPPYI          ++R 
Sbjct: 58  VISIARANASNLSIR-NVKFLKSNWFDCFHKKKKKFDLIVSNPPYISKDDPCLKFGDLR- 115

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++PR +L    +GL   R I     + L K+G   +E G NQ   V   F       +  
Sbjct: 116 YEPRRALISSNNGLFDIRIIVKDSKKFLKKNGWLLIEHGCNQGKKVREFFIKSSYQKIKT 175

Query: 250 FKDYGGNDRVLLFC 263
            +DY G +RV    
Sbjct: 176 IQDYSGKERVTFGR 189


>gi|325961839|ref|YP_004239745.1| methylase of HemK family [Arthrobacter phenanthrenivorans Sphe3]
 gi|323467926|gb|ADX71611.1| putative methylase of HemK family [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 271

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 1/198 (0%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R +    +  ILGW  F   R+++ +  F PR  TELLV  A+   L      
Sbjct: 44  ALAGWVDRRVNGVPLEHILGWAGFDGGRISVDAGVFVPRRRTELLVHEAV-RLLHHASSA 102

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++DL  G+GAV  A+ +  P  +    DI   A+E A+ N    G       L   
Sbjct: 103 SRGVVVDLCCGSGAVGAAIARRRPDIELHAADIDPAAVECARRNVNAFGAHVHQGDLFEA 162

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +     V+  N PY+ +  +  +  E R F+P  +LDGG DGL  +R I+ G    
Sbjct: 163 LPLRLRDRVQVLAVNAPYVPTGAIAAMPPEARVFEPHTALDGGADGLDFHRRISAGALEW 222

Query: 217 LNKDGLCSVEIGYNQKVD 234
           +   G   +E   +Q   
Sbjct: 223 IAPVGHLLIETSRHQSES 240


>gi|256380185|ref|YP_003103845.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
 gi|255924488|gb|ACU39999.1| modification methylase, HemK family [Actinosynnema mirum DSM 43827]
          Length = 261

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 7/193 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R    + +  +LGW +F  +R+ ++   F PR  TE         +L      
Sbjct: 42  ALDALVTRRAAGDPLEHLLGWAEFCGLRIAVAPGVFVPRRRTER------LVALAAALAP 95

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LDL  G+GA+  AL    P  +    D+   A E A+ N        R D     
Sbjct: 96  PAPVVLDLCCGSGALGAALAHRLPGARVTAADLDPAAAECARRNLPAPHRVHRGDLYDP- 154

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               + G  DV+++N PY+ +  +  +  E RD +PR +LDGG DGL   R +A G    
Sbjct: 155 LPDDLRGRVDVLLANAPYVPTGAIGLMPPEARDHEPRTALDGGSDGLDVLRRVAAGAPDW 214

Query: 217 LNKDGLCSVEIGY 229
           L + G    EIG 
Sbjct: 215 LAERGALLFEIGE 227


>gi|57242017|ref|ZP_00369957.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis
           RM3195]
 gi|57017209|gb|EAL53990.1| protoporphyrinogen oxidase (hemK) [Campylobacter upsaliensis
           RM3195]
          Length = 265

 Score =  185 bits (471), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC         + ++ +   D+R+ F     I R  + E    +    DFY
Sbjct: 16  EKANEALFILCEFLQKDRTWLFLNENLEFDEREYF---ELIRRFKEGEPYEYLFKKADFY 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PR ++E      L   L    K  +   L++G G+G + + L K    
Sbjct: 73  GLEFYIEKGVLIPRYDSE----ILLEKLLELTHKEKLQNALEIGFGSGILSIILAKNL-G 127

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K    DI+ KAL+IA  NA  + V   F     +     +G FD+I SNPPYI++    
Sbjct: 128 LKIKACDINEKALKIALKNAKKHEVLIDFVLSDFEKLELRKGEFDLIFSNPPYIKNSYP- 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V++ +P+ +L GG  G      I     +   +    + E GY+QK  + +I ++
Sbjct: 187 -LDKWVQN-EPKNALLGGEKGYEILEKIIIFAYQ--KEAKFLACEFGYDQKEILSQILDT 242

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                   FKD  G DR  +  R
Sbjct: 243 YNFK-AEFFKDENGFDRAFVAKR 264


>gi|329941816|ref|ZP_08291081.1| methylase [Streptomyces griseoaurantiacus M045]
 gi|329299533|gb|EGG43433.1| methylase [Streptomyces griseoaurantiacus M045]
          Length = 254

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 6/208 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            +T  + R +  E +  ++G  +F+ + +T+    F PR  TE LVD ALA +       
Sbjct: 33  EITAMVDRRVAGEPLEIVVGRAEFHGLLITVEPGVFVPRRRTEFLVDQALALT------P 86

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++DL  G+GAV  AL       +    DI   A+  A+ N            L + 
Sbjct: 87  DAGLVVDLCCGSGAVGAALAASPAAPRLHAADIDPVAVRCARRNLAPYEGHVHEGDLYAA 146

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              ++ G  DV+ +N PY+ S  V  L  E R+ +P  +LDGG DGL   R +A G  R 
Sbjct: 147 LPDALRGRIDVLTANVPYVPSDEVRLLPAEAREHEPPAALDGGTDGLDLLRRVAAGAPRW 206

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G   VE    Q    +  F    L
Sbjct: 207 LAPGGALLVETSERQAPAALAAFTGAGL 234


>gi|225551975|ref|ZP_03772915.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1]
 gi|225370973|gb|EEH00403.1| putative protoporphyrinogen oxidase [Borrelia sp. SV1]
          Length = 286

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 60/242 (24%), Positives = 107/242 (44%), Gaps = 8/242 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           +I +    L  +++    + I +  K   IH IL  ++F  +  +L+     PR +TE L
Sbjct: 35  LIANIKKSLTKKEKKLFFDQIDKIEKGTPIHYILQKKEFMGIEFSLNKHVLIPRFDTECL 94

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            + AL     +I++    +ILDL  G+G + L++       K +  DIS KAL+I + N 
Sbjct: 95  AEEALI----QIQQNGFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNT 149

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GI 200
               + +  + + S+    ++G  D+I++NPPY+    ++         +P  +L G G 
Sbjct: 150 KKLKLEKFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGK 207

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           DGL+  R I       LN +GL  +E    Q   +      +    +    D     R L
Sbjct: 208 DGLNISRKILSQAKEKLNPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARAL 267

Query: 261 LF 262
           + 
Sbjct: 268 IL 269


>gi|325066843|ref|ZP_08125516.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces oris K20]
          Length = 285

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G     ++ D     D          ++R    E +  I+G        L
Sbjct: 28  DARILAEHLLG--RALLLADGA---DGDFPAAYDALVLRRECREPLQHIIGRMWLRGAEL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKG 124
                 F  RPETE++  +A+  +   ++    V +  DL TG+GA+   + KE P  + 
Sbjct: 83  ISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVLTADLCTGSGAIAACVAKEVPGARV 142

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIESVI 179
           V V+IS  A  +A+ N     V  R + + +D         + G  DV+VSNPPY+ +  
Sbjct: 143 VAVEISETAASLARENCERL-VPGRVEVIHADATDPLVLHDLNGQVDVVVSNPPYVPAGA 201

Query: 180 VDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           V+    E    +P ++L GG  DGL     +       L   G+  +E  + Q   +   
Sbjct: 202 VEDTETE--QHEPTVALYGGGPDGLEIPIDVLVRSVALLRTGGVLVMEHDHEQGALLRAA 259

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                       +D  G DR L   R
Sbjct: 260 ALGAGFKQAETGQDLTGRDRYLRAVR 285


>gi|329945389|ref|ZP_08293152.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
 gi|328529011|gb|EGF55942.1| protein-(glutamine-N5) methyltransferase [Actinomyces sp. oral
           taxon 170 str. F0386]
          Length = 298

 Score =  185 bits (470), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 103/266 (38%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G     ++ D     D          ++R    E +  I+G        L
Sbjct: 41  DARILAEHLLG--RALLLADGA---DGDFPAAYDALVLRRECREPLQHIIGRMWLRGAEL 95

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKG 124
                 F  RPETE++  +A+  +   +     V +  DL TG+GA+   + KE P  + 
Sbjct: 96  ISRPGVFIVRPETEVVAGAAIEAAREVMAGGGGVVLTADLCTGSGAIAACVAKEVPGARV 155

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIESVI 179
           V V+IS  A  +A+ N     V  R + + +D         + G  DV+VSNPPY+ +  
Sbjct: 156 VAVEISETAAALARENCERL-VPGRVEVIHADATDPLVLHDLNGQVDVVVSNPPYVPAGA 214

Query: 180 VDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           V+    E    +P ++L GG  DGL     +       L   G+  +E  + Q   +   
Sbjct: 215 VE--DTETAQHEPTVALYGGGPDGLDIPVDVLVRSVALLRTGGVLVMEHDHEQGALLRAA 272

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                       +D  G DR L   R
Sbjct: 273 ALGAGFKQAETGQDLTGRDRYLRAVR 298


>gi|320011146|gb|ADW05996.1| modification methylase, HemK family [Streptomyces flavogriseus ATCC
           33331]
          Length = 262

 Score =  184 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 7/204 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
            + R      +  +LGW +F  +R+ +    F PR  TE LV  A A +       D   
Sbjct: 45  MLERREAGHPLEHVLGWAEFCGLRIAVDPGVFVPRRRTEFLVRQAAALA------PDRAV 98

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DL  GTGA+  AL       +    D+   A+  A+ N    G     D        +
Sbjct: 99  VVDLCCGTGALGRALASTLRDVELHAADVEPAAVRCARRNVGALGTVHEGDLFTP-LPRA 157

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+++N PY+ +  V  L  E R  +P ++LDGG DGL   R +    +  L   
Sbjct: 158 LRGRVDVLLANVPYVPTGDVGLLPAEARVHEPLVALDGGGDGLDVMRRVVGEAADWLAPG 217

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G   VE    Q            L
Sbjct: 218 GSLLVETSERQAPAAEETVRGGGL 241


>gi|326771964|ref|ZP_08231249.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces viscosus C505]
 gi|326638097|gb|EGE38998.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Actinomyces viscosus C505]
          Length = 301

 Score =  184 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 104/266 (39%), Gaps = 15/266 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      + G     ++ D     D          ++R    E +  I+G        L
Sbjct: 44  DARILAEHLLG--RALLLADGA---DGDFPAAYDALVLRRECREPLQHIIGRMWLRGAEL 98

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKG 124
                 F  RPETE++  +A+  +   ++    V +  DL TG+GA+   + KE P  + 
Sbjct: 99  ISRPGVFIVRPETEVVAGAAIEAAREVMDGGGGVVLTADLCTGSGAIAACVAKEVPGARV 158

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIESVI 179
           V V+IS  A  +A+ N     V  R + + +D         + G  DV+VSNPPY+ +  
Sbjct: 159 VAVEISETAASLARENCERL-VPGRVEVIHADATDPLVLHDLNGQIDVVVSNPPYVPAGA 217

Query: 180 VDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           V+    E    +P ++L GG  DGL     +       L   G+  +E  + Q   +   
Sbjct: 218 VEDTETE--QHEPTVALYGGGPDGLEIPIDVLVRSVALLRTGGVLVMEHDHEQGALLRAA 275

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
                       +D  G DR L   R
Sbjct: 276 ALGAGFKQAETGQDLTGRDRYLRAVR 301


>gi|315638261|ref|ZP_07893442.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis
           JV21]
 gi|315481608|gb|EFU72231.1| protein-(glutamine-N5) methyltransferase [Campylobacter upsaliensis
           JV21]
          Length = 265

 Score =  184 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 14/263 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   LC +       + ++ +   D+R+ F     I R  + E    +    DFY
Sbjct: 16  EKANEALFILCELLQKDRTWLFLNENLEFDEREYF---ELIRRFKEGEPYEYLFKKADFY 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PR ++E      L   L    K  +   L++G G+G + + L K    
Sbjct: 73  GLEFHIEKGVLIPRYDSE----ILLEKLLELTHKEKLQNALEIGFGSGILSIILAKNLK- 127

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K    DI+ KAL+IA  NA  + V   F     +     +G FD+I SNPPYI++    
Sbjct: 128 LKIKACDINEKALKIALKNAKKHEVLIDFVLSDFEKLELRKGEFDLIFSNPPYIKNSYP- 186

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   V++ +P+ +L GG  G      I     +   +    + E GY+QK  + +I ++
Sbjct: 187 -LDKWVQN-EPKNALLGGEKGYEILEKIIIFAYQ--KEAKFLACEFGYDQKEILSQILDT 242

Query: 242 RKLFLVNAFKDYGGNDRVLLFCR 264
                   FKD  G DR  +  R
Sbjct: 243 YNFK-AEFFKDENGFDRAFVAKR 264


>gi|47229807|emb|CAG07003.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 219

 Score =  184 bits (469), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 10/218 (4%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGT 106
             +  ++   DF +V L +    F PRPETE LV+  L    S   +        L++G 
Sbjct: 1   MPVQYVIEEWDFRDVTLKMRPPVFIPRPETEELVELVLGDLESRSWVGADTQQTCLEVGC 60

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------ 160
           G+GA+ L+LL+  P  + + VD S  A+E+   NA   G+ +R      D   +      
Sbjct: 61  GSGAISLSLLRSRPQLQVLAVDQSRDAVELTAENAGRLGLEDRLQVHHLDVMKAGETLLS 120

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G    +VSNPPY+ S  ++ L  E+  F+   +LDGG DGL+  + I     + L   
Sbjct: 121 LCGSVSALVSNPPYLFSEDMNSLEPEISRFEDHGALDGGEDGLNTIKQILILAPQILINH 180

Query: 221 GLCSVEIGYNQKVDVVRIFESR--KLFLVNAFKDYGGN 256
           G   +E+       +    E+    L  V   +D  G 
Sbjct: 181 GRVYLEVEPRHPARIQAWVEANVGGLCYVETRRDISGR 218


>gi|226321515|ref|ZP_03797041.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26]
 gi|226232704|gb|EEH31457.1| putative protoporphyrinogen oxidase [Borrelia burgdorferi Bol26]
          Length = 286

 Score =  184 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE L + AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|15594542|ref|NP_212331.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31]
 gi|2688095|gb|AAC66591.1| protoporphyrinogen oxidase, putative [Borrelia burgdorferi B31]
          Length = 286

 Score =  184 bits (469), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
              + I +  K   IH IL  ++F  +  +L+     PR +TE L + AL     +I++ 
Sbjct: 50  LFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALI----QIQQN 105

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +ILDL  G+G + L++       K +  DIS KAL+I + N     + +  + + S+
Sbjct: 106 GFKKILDLCCGSGCIGLSIAYYIRK-KVILSDISTKALQIVEKNTKKLKLEKFVEIIHSN 164

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSR 215
               ++G  D+I++NPPY+    ++         +P  +L G G DGL+  R I +    
Sbjct: 165 LLKCIKGKLDIIITNPPYLNKEELEI--KNKIKKEPTKALLGFGKDGLNISRKILNQAKE 222

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            L+ +GL  +E    Q   +      +    +    D     R L+ 
Sbjct: 223 KLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALIL 269


>gi|253988662|ref|YP_003040018.1| modification methylase hemk [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638014|emb|CAR66642.1| modification methylase hemk precursor [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780112|emb|CAQ83273.1| modification methylase hemk precursor [Photorhabdus asymbiotica]
          Length = 283

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 104/266 (39%), Gaps = 24/266 (9%)

Query: 2   QALRD-SHSFLCRVTGLSSHQVIVDPDSVLD--------DRQRFFLTNAIVRSLKHESIH 52
           QA  D +   L    G+    V  D D ++D        DR R     A+        + 
Sbjct: 8   QAAIDKARELLSEA-GIW--DVETDLDCLIDRYLERRCKDRARDEFMLAVHERCNRIPLG 64

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+G  DF  + LT+ +  F PRP +++       +     +      +LDL +G+GA+ 
Sbjct: 65  HIVGAVDFDGLPLTIGTGIFIPRPHSQI----IHKWLENESQVPQGATVLDLCSGSGAIG 120

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDW-----FSSVEGLFD 166
           LA+ K  P  K   V+    A +    N       + + + L++D      FS       
Sbjct: 121 LAIAKYRPDLKVTCVEYDDVAFQYLTRNINRLANWAIKAEALKADLWDWQAFSHFNESVG 180

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IV+NPPY+       +  E  +  P  S+  G DGL   R I     + L  +G   +E
Sbjct: 181 LIVANPPYVPEQ--QTILPEWEEHHPYTSVYSGNDGLDLTRLIIKQARQLLQLNGWLVIE 238

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKD 252
            G +Q   V  +F      L+    D
Sbjct: 239 HGESQGERVRALFSDAGFSLIRTIID 264


>gi|326927696|ref|XP_003210027.1| PREDICTED: hemK methyltransferase family member 1-like [Meleagris
           gallopavo]
          Length = 360

 Score =  184 bits (468), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 29/291 (9%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDS---VLDDRQRFFLTNAIVRSLKHESIHRILGWR 58
           +A   S   +  V G +     +  +     L   Q+  +     + L+   +  +LG  
Sbjct: 68  EARESSEYIVSFVLG-AKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEW 126

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--------DVVRILDLGTGTGA 110
           DF ++ L +    F PRPETE L+   +     + + +            IL++G G+GA
Sbjct: 127 DFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGA 186

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSV---- 161
           + L+LL + P  + + VD    A+++ + N  +   ++      F    S  F       
Sbjct: 187 IALSLLCKIPQSRVLAVDKEEAAVDLTRENVHSLSCNQAVTSTSFQIGISLLFQECQGSA 246

Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                 G  D IVSNPPY+    +  L  E+  ++   +LDGG DG+   + I       
Sbjct: 247 KHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSL 306

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
           L   G   +E+       V     +     L L    KD+ G  R L   +
Sbjct: 307 LKDSGSVFLEVDPRHPDLVEDWLCAHPDLLLTLCAVHKDFCGKPRFLHIQK 357


>gi|33239811|ref|NP_874753.1| methylase of polypeptide chain release factor [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
 gi|33237337|gb|AAP99405.1| Methylase of polypeptide chain release factor [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 293

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 5/218 (2%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G   + +  L ++S    PR ETE+L+D AL      + K    R  DLGTG+G
Sbjct: 77  PLQHLVGKCPWRDFELKVNSSALIPRQETEILIDIALKKVDAGLMKYG--RWADLGTGSG 134

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166
           A+ +AL +  P ++G   D    AL +A+SN  T   +        DW+  +    G FD
Sbjct: 135 ALAVALARALPLWEGHAADCCNDALALAESNINTLTENANVSLHLGDWWEPLKPWWGNFD 194

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V+NPPYI    +  L   VRD +P ++L GG DG+   R +  G  + L   G   +E
Sbjct: 195 LVVANPPYIPKTHLSELDPVVRDHEPILALSGGDDGMDSCRKVIKGAMKGLRSGGWLLLE 254

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             ++Q    + +        V+   D  G  R  L  R
Sbjct: 255 HNFDQSEQALNLMVDSGFLEVDFENDLEGVRRFGLALR 292


>gi|328767396|gb|EGF77446.1| hypothetical protein BATDEDRAFT_91674 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 425

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 41/272 (15%)

Query: 30  LDDRQRFFLTNAI-VRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL----LVDS 84
           L   ++  L   I  R + H+ +  ILG + F  + +++   T  PR ETE     L D 
Sbjct: 153 LSSIEQLRLDRWIHDRCIAHKPLQYILGTQPFCGLDISVRRPTLIPRWETEEWTLSLADR 212

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVT 143
             A +  + +    +RIL+L +G+G + LAL K+       VGVDIS  A+ +A+ N   
Sbjct: 213 IHAKTANQ-QLPKPLRILELCSGSGCISLALSKKLGIHAHIVGVDISLSAILLARFNQRK 271

Query: 144 -------NGVSERFDTLQSDWFSS-----------------VEGLFDVIVSNPPYIESVI 179
                  NG S++    Q D F +                 V+  FD+I+SNPPYI    
Sbjct: 272 LMIGCVGNGSSQQLFFDQGDLFDNEFVGRLLSQMSSRLPNLVDPRFDMIISNPPYISPTE 331

Query: 180 VDCLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVSRHLNK---------DGLCSVEIGY 229
            D L   V+ ++ + + L     G+  YR I +     L                 EIG 
Sbjct: 332 YDSLDSSVKMWEDQRALLASDEHGIRFYRRIEELADDLLLPLSHACQQYDLPRIVFEIGN 391

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            Q   V     +R+    +  +D  G+DRV+L
Sbjct: 392 TQGSAVKSQLGNRQWRRTDLVQDMAGHDRVIL 423


>gi|255029751|ref|ZP_05301702.1| hypothetical protein LmonL_13024 [Listeria monocytogenes LO28]
          Length = 209

 Score =  183 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 5/189 (2%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +AL K  P      
Sbjct: 85  VTEDVLIPRPETEELV----ACAEAFLKKHPVKNVLDVCTGSGIIAIALKKAFPEISVTA 140

Query: 127 VDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  AL +A+ NA+      RF +T   + F   E  FD+IV+NPPYI       +  
Sbjct: 141 SDISAPALVVARKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSD 200

Query: 186 EVRDFDPRI 194
            V   +P +
Sbjct: 201 YVLKNEPSL 209


>gi|300024654|ref|YP_003757265.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526475|gb|ADJ24944.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Hyphomicrobium denitrificans ATCC 51888]
          Length = 315

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 60/232 (25%), Positives = 101/232 (43%), Gaps = 6/232 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFY 61
           A+ ++   +     L    +    D  L   +R  L++ I R +   +    +       
Sbjct: 40  AVDEAAFLILSTLALPIDDINPWLDCRLTRDERSALSDIIGRRIETRKPSAYLTNSAYIQ 99

Query: 62  NVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +  +      PR     L+    L   +P  +   V R+LDL TG+G + +   +  P
Sbjct: 100 GRKFYVDERVIIPRSFIAELIARDGLGSIVP--DAAQVGRVLDLCTGSGCIAILAAEAFP 157

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
             +    DIS  AL +A  N    G+ +R  T + D F  +  G +D+I+SNPPY+ +  
Sbjct: 158 NAEIHASDISDDALAVAARNIRDYGLDQRVRTFKVDLFDGLPAGSYDLIISNPPYVAAAE 217

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           V+    E +  +P+++  GG+DGL   + I DG    L + G   VEIG  Q
Sbjct: 218 VEAFAPEYQA-EPKLAHLGGVDGLDLVKRILDGAGERLEEQGNLIVEIGTGQ 268


>gi|148652735|ref|YP_001279828.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter sp. PRwf-1]
 gi|148571819|gb|ABQ93878.1| modification methylase, HemK family [Psychrobacter sp. PRwf-1]
          Length = 394

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 108/276 (39%), Gaps = 34/276 (12%)

Query: 6   DSHSFLCRVT--GLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYN 62
           ++ + +        S+ + I+  D  L   ++  +   +  R +  + +  ++    F +
Sbjct: 94  EAAAIVLHTLSLDWSADEQIL--DCRLTASEKAEVLALLQSRIINRQPLSYLVNLAYFCD 151

Query: 63  VRLTLSSDTFEPRPETELLVDSALA-------------------------FSLPRIEKRD 97
           +   +      PR     L+                                L   +   
Sbjct: 152 LPFYVDERVLIPRSPIAELIRQQFYPYFETNEMAQPLGADSTPDLPSFYLHGLENKQLYQ 211

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RILDL TG+G + +AL            DI   ALE+A  N   +G+  + + ++SD 
Sbjct: 212 PERILDLCTGSGCIAIALASRFRDALVDAADIDNSALEVAAVNVEHHGMEHQLNLIESDL 271

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F  +  E  +++IV+NPPY+++  +  L  E    +P  +L  G DGL     I +  + 
Sbjct: 272 FEKIPAENQYELIVTNPPYVDAAAMAELPPEF-IHEPEHALAAGQDGLDLVHKILNEAAD 330

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +L+ +GL   E+G +    + + +   +   ++  +
Sbjct: 331 YLSPEGLLVCEVG-DSDWALRQAYPEIQFNWLSFAR 365


>gi|93006460|ref|YP_580897.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter cryohalolentis K5]
 gi|92394138|gb|ABE75413.1| modification methylase, HemK family [Psychrobacter cryohalolentis
           K5]
          Length = 391

 Score =  182 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 30/262 (11%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
              S++  I+D      ++Q   L+    R  + + +  ++    F ++   +      P
Sbjct: 100 LDWSANDQILDCRLTTSEKQLV-LSLLEERIAERKPLSYLINLSYFCDLPFYVDERVLIP 158

Query: 75  RPETELLVDSALA-------------------------FSLPRIEKRDVVRILDLGTGTG 109
           R     L+                                L   +     RILDL TG+G
Sbjct: 159 RSPIAELIRQQFHPYFEVSELAKPIGVSVNNQAPAFYDHGLEIKQLSQPERILDLCTGSG 218

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDV 167
            + +AL           VDI   ALE+A  N   + +  + + ++SD F+ +  E  +++
Sbjct: 219 CIAIALATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDLFAKIPAENQYEL 278

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+NPPY+++ I+  L  E   ++P  +L  G DGL     I      +L+ +GL   E+
Sbjct: 279 IVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPDYLSPEGLLVCEV 337

Query: 228 GYNQKVDVVRIFESRKLFLVNA 249
           G + +  + + +   +   +  
Sbjct: 338 G-DSEWALKQAYPEIQFDWLRF 358


>gi|75676706|ref|YP_319127.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Nitrobacter winogradskyi Nb-255]
 gi|74421576|gb|ABA05775.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 340

 Score =  182 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 5/218 (2%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--AFSLPR 92
           R  L     R    +    ++       +   +      PR     ++DS       L  
Sbjct: 105 RRILAWIEQRIATRKPAAYLVNRMYMRGLPFYVDERVIVPRSFIGEILDSHFGGDDVLCL 164

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            +   + R+LDL TG+G + +   +  P       D+S  AL +A  N   +G+ +R   
Sbjct: 165 RDPATLTRVLDLCTGSGCLAILAARAFPNATVDATDLSADALAVAARNVREHGLDDRIQL 224

Query: 153 LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            Q D F++V G  +D+I+SNPPY+++  +  L  E    +PR++ DGG +G+   R I D
Sbjct: 225 AQGDLFAAVRGRRYDLIISNPPYVDAEGMAGLPRECLV-EPRMAFDGGTEGIDLVRRIID 283

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
               HL   G    E+G   K  + + +    L  ++ 
Sbjct: 284 RAETHLAPGGGLLCEVG-RCKPAIEKAYPRADLLWLDT 320


>gi|326382083|ref|ZP_08203776.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326199509|gb|EGD56690.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 310

 Score =  182 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 117/267 (43%), Gaps = 12/267 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   + +V G+   ++++  D  + D  R  + +A+ R ++   +  I     F  
Sbjct: 28  AAAEAGELVAQVLGVEPGRLLLIDD--VSDADRSRIDDAVSRRVQRVPLQHITSRAHFAG 85

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           V LT+    F PRPETEL+V+ A+A     R      +R++DL +G+GA+ +A+   +P 
Sbjct: 86  VELTVGPGVFVPRPETELIVEWAVAEIAELRRTGIAPIRVVDLCSGSGALAVAIAAHAPD 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-----FSSVEGLFDVIVSNPPYIE 176
            +   V+++  A E  + N    G++ R   +++D       S +     V+VSNPPY+ 
Sbjct: 146 VQVTAVELAETASEYLRRNVHDLGLAGRVSVVRADVTDATAMSPILTGAHVVVSNPPYVP 205

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           +     +  EV   DP  ++  G  G+     +   ++  L+   + ++E        V 
Sbjct: 206 AQ--AAVSPEVA-HDPPEAVFSGDSGMELIDALVPILAAALSPAAVVAIEHDDTTSEAVC 262

Query: 237 RIFESR-KLFLVNAFKDYGGNDRVLLF 262
                      V   +D  G  R +  
Sbjct: 263 DALARAGGFADVRPRRDLAGRPRFVTA 289


>gi|110635204|ref|YP_675412.1| HemK family modification methylase [Mesorhizobium sp. BNC1]
 gi|110286188|gb|ABG64247.1| modification methylase, HemK family [Chelativorans sp. BNC1]
          Length = 234

 Score =  182 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 9/213 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  + L L+ D   PR ETELL  SA+              ++D+  G+G + L +  
Sbjct: 21  ARFMGIELELAPDVLVPREETELLGRSAVDLLKGMA---GSPIVIDMCCGSGNLALGIAA 77

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNP 172
             P  +    D++   + +A+ NA   G+ +R   +Q D F       +EG  D +VSNP
Sbjct: 78  AVPAARLWASDLTESTVSLARRNAERLGLLDRVKVVQGDLFSGLADEGLEGRVDFVVSNP 137

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PYI +  ++     + + +PR + DGG  GLS ++ +       L + G  + E G  Q+
Sbjct: 138 PYISTSRLETDRAHLLENEPREAFDGGPYGLSIHQRLVREAPTFLKRGGWLAFEFGEGQE 197

Query: 233 VDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             V  + +            D  G  RV +  R
Sbjct: 198 RQVAILLKRAGMYEEPRFASDQAGKPRVAIARR 230


>gi|146342880|ref|YP_001207928.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium sp. ORS278]
 gi|146195686|emb|CAL79713.1| putative adenine-specific methylase [Bradyrhizobium sp. ORS278]
          Length = 325

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 9/255 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDF 60
             + ++   +     L   Q      + +   +   + + I  R    +    ++     
Sbjct: 57  DPVAEAAFLIGEALHLRPDQFETFITARVTAAEGKTILDLISARIATRKPAAYLVHKVYM 116

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLAL 115
             +   +      PR     L+++    +         +   V  +LDL TG+G + +  
Sbjct: 117 RGLPFYVDERVIVPRSFIGELLETHFGGAEADGTSLIDDPLAVDSVLDLCTGSGCLAILA 176

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
            +  P      VDIS  AL +A  N     + ER    + D F+ +    +D+I++NPPY
Sbjct: 177 SRHFPNAVIDAVDISKDALAVAARNVADYELGERISLHRGDLFAPLSQRRYDLIITNPPY 236

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +++  +  L  E R  +P ++ DGG DGL     I      HL  +G    E+G + +  
Sbjct: 237 VDAEGMAGLPRECRA-EPALAFDGGADGLDIIHRIIGEARDHLTAEGGLLCEVGRD-RPQ 294

Query: 235 VVRIFESRKLFLVNA 249
           +   +    L  ++ 
Sbjct: 295 IEAAYPDLPLLWLDT 309


>gi|134100236|ref|YP_001105897.1| HemK family modification methylase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291006541|ref|ZP_06564514.1| HemK family modification methylase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133912859|emb|CAM02972.1| modification methylase, HemK family [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 274

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 6/218 (2%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
              L   + R      +  +LGW +F + R+ +    F PR  T+ L   A   + P   
Sbjct: 39  AADLDEMVARRAAGLPLEHVLGWAEFCHQRIAVDPGVFVPRRRTQHLARQAADLTRPH-- 96

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++DL  GTGAV  AL    P  +    DI   A+  A+ N    G       L 
Sbjct: 97  ----AVVVDLCCGTGAVGAALAAAHPGTELHAADIDPAAVRCARRNLEPAGGQVHHGDLY 152

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +++ G  D++V+N PY+ +  +D L  E R  +PR +LDGG DGL   R +     
Sbjct: 153 EPLPTALRGRIDILVANTPYVPTDALDLLPPEARIHEPRHALDGGGDGLDVQRRVTAQAP 212

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             L   G   +E    Q  +    F    L    +  D
Sbjct: 213 AWLAPGGHLLIETSTEQAPEAAATFARHGLTPDISHCD 250


>gi|315654796|ref|ZP_07907701.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333]
 gi|315490757|gb|EFU80377.1| HemK family modification methylase [Mobiluncus curtisii ATCC 51333]
          Length = 290

 Score =  182 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 100/269 (37%), Gaps = 19/269 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V G             LD          + +      +  ++G   F 
Sbjct: 27  NAPGEARLLLEHVLGHRPGY-----GERLDGATWQRFFELVGQRATRVPLQHVMGIMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      F  RPETE +   A+  +   + +    R+LDLG G+GA+ L++  E P 
Sbjct: 82  HLTLHARPGVFVVRPETEWVAQGAIDAAADWVRQGVAPRVLDLGCGSGALGLSIASEVPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLFDVIVSNP 172
                VD+S  A+E+   NA   GV+ R              +   + +   F VI +NP
Sbjct: 142 SVLTCVDVSEAAVELTAENARFTGVATRVLLADATDPQTLRNALVRAEIPPQFHVIATNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+   +      E    DP+++L  GG DGL   R                 +E   +Q
Sbjct: 202 PYV---VDPVTQPEAAQ-DPQLALYGGGADGLERPRAFLAAAVAVALPGATIVMEHAESQ 257

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +V+  E+  L       D  G  R L
Sbjct: 258 GEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|324999417|ref|ZP_08120529.1| modification methylase, HemK family protein [Pseudonocardia sp. P1]
          Length = 251

 Score =  182 bits (463), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 8/216 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L + + R +  E +  +LGW  F   R+ ++   F PR  TE LV +A+A   P     
Sbjct: 31  ELDDLVRRRVAGEPLEHVLGWAAFDGARVRVAPGVFVPRRRTEALVHAAVAGLGP----- 85

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++DL  G GAV  A+ +  P  +    D+   A   A +N    G     D   + 
Sbjct: 86  -GAVVVDLCCGCGAVGAAIARRVP-VELHAADVDPVATACAATNLDGLGTVHTGDLFAA- 142

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +++ G   V+V+N PY+ +  +  +  E RD +PR++LDGG DGL   R IA G    
Sbjct: 143 LPATLRGRVAVLVANTPYVPAGAIAGMPPEARDHEPRVALDGGGDGLDPARRIAAGAPGW 202

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L   G   +E    Q   +  +F    L       D
Sbjct: 203 LAPGGTLLIETSAAQAPLLADVFAGHGLEAGTGHDD 238


>gi|71066011|ref|YP_264738.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Psychrobacter arcticus 273-4]
 gi|71038996|gb|AAZ19304.1| putative modification methylase HemK family protein [Psychrobacter
           arcticus 273-4]
          Length = 391

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 30/262 (11%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
              S++  I+D      ++Q   L+    R  + + +  ++    F ++   +      P
Sbjct: 100 LDWSANDQILDCRLTTSEKQLV-LSLLEERIAERKPLSYLINLSYFCDLPFYVDERVLIP 158

Query: 75  RPETELLVDS-------------------------ALAFSLPRIEKRDVVRILDLGTGTG 109
           R     L+                                L   +     RILDL TG+G
Sbjct: 159 RSPIAELIRQQFHPYFDVTELAKPLGVCVNNQTPTFFDHGLEIKQLSQPERILDLCTGSG 218

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDV 167
            + + L           VDI   ALE+A  N   + +  + + ++SD F+ +  E  +++
Sbjct: 219 CIAIGLATRFVDALVDAVDIDKGALEVAMVNVDHHDLGHQVNVIESDLFAKIPAEHQYEL 278

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+NPPY+++ I+  L  E   ++P  +L  G DGL     I      +L+ +GL   E+
Sbjct: 279 IVTNPPYVDAAIMADLPPEFL-YEPEHALAAGQDGLDLVHRILFEAPDYLSPEGLLVCEV 337

Query: 228 GYNQKVDVVRIFESRKLFLVNA 249
           G + +  + + +   +   +  
Sbjct: 338 G-DSEWALKQAYPEIQFDWLRF 358


>gi|221066928|ref|ZP_03543033.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
 gi|220711951|gb|EED67319.1| modification methylase, HemK family [Comamonas testosteroni KF-1]
          Length = 312

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIV--DPDSVLD-----DRQRFFLTNAIVRSLKHESIHRIL 55
           A  ++   +    GL     +    P+SV +     D Q    T    R    +    + 
Sbjct: 39  AEDEAAWLVLWKLGLPLDSELTPGAPESVANQPVSLDIQAQTATLFDERIRSRKPAAYLT 98

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                  V   +   +  PR     L+      S+        V++LDL TG G++    
Sbjct: 99  NEAWLVGVPFYIDERSIVPRSFIAELL---ADGSIDGWLSDKTVQVLDLCTGNGSLACLA 155

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               P  +  G DIS  AL +A+ N   +G+ +R   L+S+  S V G +D+++ NPPY+
Sbjct: 156 AMAYPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESNGMSQVPGPWDLVLCNPPYV 215

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S  +  L  E +  +P ++L GG DG+   R + + +   LNKD +  +EIG N+K   
Sbjct: 216 NSDSMGKLPAEYQA-EPELALAGGTDGMDFIRQLLEDLPARLNKDAVVVLEIG-NEKPYF 273

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              F    +F ++      G+++VLL  
Sbjct: 274 EAAFPDLPVFWLDT---SSGDEQVLLIT 298


>gi|301165961|emb|CBW25535.1| putative methyltransferase [Bacteriovorax marinus SJ]
          Length = 299

 Score =  181 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 64/228 (28%), Positives = 112/228 (49%), Gaps = 9/228 (3%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDL 104
           +K   +  I G   FY     +S +   PR ETE+LV++A +F    ++   + +RILD+
Sbjct: 72  VKGYPLEYIRGRAHFYKSEFDVSENVLIPRSETEILVETASSFLRDWMKMSDERLRILDI 131

Query: 105 GTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFS 159
           GTG+GA+ ++LL+E P   +    DIS  ALE+A+ N      +         + +D  +
Sbjct: 132 GTGSGAIIISLLQEMPRPLEAFATDISKDALEVARRNYFNLRYTIPRESSLRLICTDRMN 191

Query: 160 SVEG-LFDVIVSNPPYIES-VIVDCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRH 216
            ++   F +IVSNPPYI+     D +  +V +++P ++L    D     +RT+   V   
Sbjct: 192 DLDQEKFHLIVSNPPYIKKREDRDFVHHQVDNYEPHLALYLEDDSYDEWFRTLFKQVLNS 251

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L ++G+  +E   +   D+  +        V   KDY   +R L+  +
Sbjct: 252 LYEEGIFIMEGHEDHLEDLCEVCNMIGFSTVKILKDYTNRNRFLVAKK 299


>gi|68536430|ref|YP_251135.1| methylase of peptide chain release factors [Corynebacterium
           jeikeium K411]
 gi|68264029|emb|CAI37517.1| methylase of peptide chain release factors [Corynebacterium
           jeikeium K411]
          Length = 308

 Score =  181 bits (461), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 107/292 (36%), Gaps = 41/292 (14%)

Query: 3   ALRDSHSFLCRVT------------GLSSH-QVIVDPDSVL---DDRQRFFLTNAIVRSL 46
           A  D+   +  +             G     +V VDP ++    DD       + + R +
Sbjct: 22  AAVDARLLMRYLLAETGLYNAAPGTGADPTPRVAVDPGALFMRADDPAPSAYADWVARRV 81

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
             E +  I+G   F  + L +    F PRPETELL D A  F    +  R    ++DL  
Sbjct: 82  AREPLQHIVGSAPFCGLDLFVEPGCFVPRPETELLADWAAHF----LTGRPTPHVVDLCC 137

Query: 107 GTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVE 162
           G G + L  + L ++P     G +IS  AL +A+ NA           +Q+D      +E
Sbjct: 138 GPGTLGLGVSFLYDAP-ISLTGFEISPAALRLAEKNA-RLVPQVNATFVQADLAVDDPLE 195

Query: 163 ------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                          DV+V NPPY+       +  EV   DP  ++  G DGL     + 
Sbjct: 196 PPATRDVSPGAFAPADVVVCNPPYVPEST--EISPEVAA-DPHAAVFSGDDGLDLMPRVL 252

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
                     G   +E   +    V  + + R    +   +D  G  R +  
Sbjct: 253 QWAEALGRAGGGVGIEHDDSNGAQVAAMMQQRGWRDITQHRDLAGRPRFVTA 304


>gi|121607280|ref|YP_995087.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Verminephrobacter eiseniae EF01-2]
 gi|121551920|gb|ABM56069.1| modification methylase, HemK family [Verminephrobacter eiseniae
           EF01-2]
          Length = 318

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 10/265 (3%)

Query: 2   QALRDSHSFLCRVTGLSS-HQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
            A  ++   +    GL     +    +  +   Q   L       +   +    +     
Sbjct: 53  NAHDEAAWLVLWRLGLPLDSDLSALKNQPVTQAQLAQLAALFEERMHSRKPAAYLTREAW 112

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
              V   +      PR    L+ +     S+         ++LDL TG G++ +      
Sbjct: 113 LQGVAFYIDERAIVPRS---LIAELLADGSVDEFLGAHTRQVLDLCTGNGSLAVLAALAW 169

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +  G DIS +AL +A+ N   +G+ +R     SD  S++ G +D+I+ NPPY+ +  
Sbjct: 170 PEVQVTGADISPEALAVARINVERHGLQQRIALQLSDGLSALPGPWDLILCNPPYVNAAS 229

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E R  +PR++L GG DG+   R +    +  ++ + +  +EIG N++      F
Sbjct: 230 MAALPAEYRA-EPRLALAGGADGMDFIRPLLRTAAACMSDNAVLVLEIG-NERPGFEAAF 287

Query: 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264
               +  +       G D+VLL  R
Sbjct: 288 AQHPVHWLAT---SAGPDQVLLLTR 309


>gi|158315911|ref|YP_001508419.1| HemK family modification methylase [Frankia sp. EAN1pec]
 gi|158111316|gb|ABW13513.1| modification methylase, HemK family [Frankia sp. EAN1pec]
          Length = 305

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/232 (27%), Positives = 88/232 (37%), Gaps = 14/232 (6%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R      +  +LGW  F  +R+ +    F PR  TE LVD A A         
Sbjct: 60  ELAVMVARRASGLPLEHVLGWVSFRGLRVAVDERVFVPRRRTEFLVDRAAAILAAGATVG 119

Query: 97  DVVR------ILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN----AVTNG 145
           D  R      ++DL  G+GAV  AL             D+   A+  A+ N    A    
Sbjct: 120 DRARSAVGWVVVDLCCGSGAVGAALASAVRGPVDLHAADVDPVAVACARRNLTGPARITP 179

Query: 146 VSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              R     L +     + G  D++V+N PY+ +  +  L  E R  +PR +LDGG DGL
Sbjct: 180 APGRVYTGDLYAPLPPVLRGRVDLLVANVPYVPTGRLGLLPPEARVHEPREALDGGSDGL 239

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYG 254
              R +A   +  L   G   VE    Q       F    L   V   +D  
Sbjct: 240 DMLRRVAAEATDWLAPGGSLLVETSRAQAPLAGETFLHAGLVTTVATCEDLS 291


>gi|262341100|ref|YP_003283955.1| putative methyltransferase small domain protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
 gi|262272437|gb|ACY40345.1| putative methyltransferase small domain protein [Blattabacterium
           sp. (Blattella germanica) str. Bge]
          Length = 299

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 23/267 (8%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQR------FFLTNAIVRSLKHESIHRILGWRDFYN 62
             +  +       +++     L  +++        L   +    K+  I  ++G   F+ 
Sbjct: 31  LLMTHIFRCDKTTILL----QLSRKEKINFLIYEKLIEKLWELKKNRPIQYVIGKAYFFG 86

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   ++   F PRPETE LV   L  +  + +    V+I D+GTG+G + +AL K+ P  
Sbjct: 87  MEFIVNEKVFIPRPETEELVYWILQDN--KNKNTSKVQIFDIGTGSGCISIALKKKKPEM 144

Query: 123 K-GVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
           +    +D   + L+IA+ NA  + V     + D L+   F          +IVSNPPY+ 
Sbjct: 145 EHVYAIDSYQETLDIARKNAELHNVEISFKKVDILKDSIFIPKMNKNSVSIIVSNPPYVR 204

Query: 177 SVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGL--CSVEIGYNQKV 233
                 L   +  ++P  +L     D L  Y+ I+  + + L   G+     EI     +
Sbjct: 205 LSEKKLLHPNIIQYEPFQALFVPDEDPLIFYKKISFWIQKKLT--GVVYVYFEINQFIYL 262

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVL 260
           D++   +      +   +D+ G  R++
Sbjct: 263 DIIDFLKKIGFLNIEIRRDFQGFFRMI 289


>gi|332529216|ref|ZP_08405180.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
 gi|332041439|gb|EGI77801.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Hylemonella gracilis ATCC 19624]
          Length = 307

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 4/238 (1%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV-DSAL 86
           SV     R  L     R    +    +        V   +   T  PR     L+ D+  
Sbjct: 59  SVSTAEARDALALIDERIATRKPAAYLTREAWLQGVPFYVDERTIVPRSFIAELIADADG 118

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +L      D   +LDL TG G++ +      P  +  G DIS +AL +A+ N   +G+
Sbjct: 119 QGTLDAWLGEDTSAVLDLCTGNGSLAVLAALAWPEVRVDGADISDEALAVARINIDKHGL 178

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            ER   L+SD  + V   +D+I+ NPPY+    +  L  E R  +P ++L GG DG+   
Sbjct: 179 QERVQLLKSDGLAQVARSYDLILCNPPYVNQQSMTALPAEYRA-EPELALAGGADGMDFI 237

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R +       ++   +  +EIG N++      F +     V       G D+VLL  R
Sbjct: 238 RRLLRDAPARMSAHAVLVLEIG-NEREHYEAAFPALAARTV-WLDTSAGADQVLLLTR 293


>gi|229018524|ref|ZP_04175384.1| Modification methylase, HemK [Bacillus cereus AH1273]
 gi|228742765|gb|EEL92905.1| Modification methylase, HemK [Bacillus cereus AH1273]
          Length = 258

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 6/209 (2%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +   +    +  ++G+ +F  +R+ +    F PR  TE LV    A S      
Sbjct: 34  EDLMKMVEMRVNGLPLEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------ 87

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    I+DL  G+GAV  AL       +   VDI   A++ A  N    G       L  
Sbjct: 88  RSSDIIVDLCCGSGAVGAALASALGRVELYSVDIDPIAVQCASRNVTNFGGHAFEGDLYK 147

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               S++G  +++V+N PY+ + I+  L  E R  +P ++LDGG DGL+  R +A+    
Sbjct: 148 ALPDSLKGHVNILVANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALL 207

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            L  DG   +E    Q      IF +  L
Sbjct: 208 WLALDGHLLIEASEVQAPQACEIFAAAGL 236


>gi|260577563|ref|ZP_05845502.1| methylase of peptide chain release factor [Corynebacterium jeikeium
           ATCC 43734]
 gi|258604287|gb|EEW17525.1| methylase of peptide chain release factor [Corynebacterium jeikeium
           ATCC 43734]
          Length = 308

 Score =  181 bits (460), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 107/292 (36%), Gaps = 41/292 (14%)

Query: 3   ALRDSHSFLCRVT------------GLSSH-QVIVDPDSVL---DDRQRFFLTNAIVRSL 46
           A  D+   +  +             G     +V VDP ++    DD       + + R +
Sbjct: 22  AAVDARLLMRYLLAETGLYNAAPGTGADPMPRVAVDPGALFMRADDPAPSAYADWVARRV 81

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
             E +  I+G   F  + L +    F PRPETELL D A  F    +  R    ++DL  
Sbjct: 82  AREPLQHIVGSAPFCGLDLFVEPGCFVPRPETELLADWAAHF----LTGRPTPHVVDLCC 137

Query: 107 GTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVE 162
           G G + L  + L ++P     G +IS  AL +A+ NA           +Q+D      +E
Sbjct: 138 GPGTLGLGVSFLYDAP-ISLTGFEISPAALRLAEKNA-RLVPQVNATFVQADLAVDDPLE 195

Query: 163 ------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                          DV+V NPPY+       +  EV   DP  ++  G DGL     + 
Sbjct: 196 PPATRDVSPGAFAPADVVVCNPPYVPEST--EISPEVAA-DPHAAVFSGDDGLDLMPRVL 252

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
                     G   +E   +    V  + + R    +   +D  G  R +  
Sbjct: 253 QWAEALGRAGGGVGIEHDDSNGAQVAAMMQQRGWRDITQHRDLAGRPRFVTA 304


>gi|226304213|ref|YP_002764171.1| methyltransferase [Rhodococcus erythropolis PR4]
 gi|226183328|dbj|BAH31432.1| methyltransferase [Rhodococcus erythropolis PR4]
          Length = 264

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/238 (25%), Positives = 92/238 (38%), Gaps = 21/238 (8%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              ++++     LD+     L   + R +  E +  +LGW +F  +R+ + S  F PR  
Sbjct: 31  DEARLLLHTARSLDE-----LDAMVDRRVAGEPLEPVLGWVEFCGLRIHIDSGVFVPRRR 85

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE L   A +  +            D+  G+GAV   L           VD+   A+  A
Sbjct: 86  TEFLARQACSLVVSGSVVV------DMCCGSGAVGTVLQSTLDAVDLYAVDVEPAAVRCA 139

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + N            L+ D F  +     G  DV+V+N PY+ +  +  +  E R  +P 
Sbjct: 140 RRNITPPE-----RVLEGDLFEPLPTELLGRVDVVVANAPYVPTDSIRLMPPEARLHEPL 194

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAF 250
           +SLDGG DGL   R I    +  L   G   VE    Q    V  F        V  +
Sbjct: 195 VSLDGGTDGLDLQRRIIADAAPWLRPGGCLLVETSTEQVEMTVETFTRGGFLTRVATY 252


>gi|32491158|ref|NP_871412.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
 gi|25166365|dbj|BAC24555.1| yfcB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 307

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 97/228 (42%), Gaps = 10/228 (4%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           DS L  +++  + N I + +K       ++      ++   +      PR     ++   
Sbjct: 68  DSKLTKKEKKIVINNIKKRVKERIPTSYLINKAWLCSLEFYVDERVVIPRSPIGEII--- 124

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
              +   + K     ILD+ TG+G + +   +          DIS  AL +AK N     
Sbjct: 125 -TDNFRDLIKFKPKNILDVCTGSGCLSIIAAEVYSEAFIDASDISEGALNVAKFNIKKYN 183

Query: 146 VSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +  R + + SD FS++      +D+I+ NPPY+   +++ L  E    +P I L GG DG
Sbjct: 184 LQNRINLVLSDLFSNIYFKSKKYDLIIINPPYVNKTVMNSLPKEFL-HEPEIGLFGGNDG 242

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           L   R I +  +  L+ +G+   E+G N    + + + +     ++  
Sbjct: 243 LVLIRKILNESANFLSDNGVLVCEVGEN-MSIISQEYSNAPFIWIDCI 289


>gi|223995553|ref|XP_002287450.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana
           CCMP1335]
 gi|220976566|gb|EED94893.1| hemk-like sam-dependent methylase protein [Thalassiosira pseudonana
           CCMP1335]
          Length = 294

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 32/290 (11%)

Query: 2   QALRDSHSFLCRVT----GLSS-HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +    +   L        G+SS H + +     L D Q    ++ I R  K+E I  I+G
Sbjct: 9   EPEESALYLLSHAIELINGVSSVHNLAL---QQLTDEQTTLYSSFIERRKKYEPIQYIIG 65

Query: 57  WRDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--------VVRILDLGTG 107
             DF+ +  L++      PRPETE LV+  LA     I KR          +RILD+G G
Sbjct: 66  KWDFHQLSGLSIRRPMLCPRPETEELVEILLAEIEELIHKRGKKDKGSNGRIRILDVGAG 125

Query: 108 TGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164
           TGA+ +A+  + P   + + +D+  +A+E++  NA    +S+  D+   D  SS +    
Sbjct: 126 TGAIGIAIAHQLPHHVQVLALDVLPEAVELSNENAQQF-LSKLVDSDVGDVSSSQQYPMN 184

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL----NKD 220
           FD++VSNPPYI S  +  L  ++ D++   +L GG DGL   R I   + + +     + 
Sbjct: 185 FDLVVSNPPYIPSSDMPSLSTDILDYESVEALCGGDDGLDVIRDIVQRLPKWMPRKDEEK 244

Query: 221 GLCSVEIGYNQKVDVVRIFE----SRKLFLVNA---FKDYGGNDRVLLFC 263
             C +E+  +    +           K + V       D+ G  R +   
Sbjct: 245 RYCWMEVDDSHPSLLESWLAPGSSESKRWSVEYCERRNDFCGRSRFVKLR 294


>gi|264678482|ref|YP_003278389.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
 gi|262208995|gb|ACY33093.1| modification methylase, HemK family [Comamonas testosteroni CNB-2]
          Length = 315

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 15/268 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIV--DPDSVLD-----DRQRFFLTNAIVRSLKHESIHRIL 55
           A  ++   +    GL     +    P+SV +     D Q    T    R    +    + 
Sbjct: 39  AEDEAAWLVLWKLGLPLDSELTPGAPESVANQPVSLDAQAQIATLFEERIRSRKPAAYLT 98

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                  V   +   +  PR     L+      S+        V++LDL TG G++    
Sbjct: 99  NEAWLVGVPFYIDERSIVPRSFIAELL---ADGSIDGWLSDKTVQVLDLCTGNGSLACLA 155

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
               P  +  G DIS  AL +A+ N   +G+ +R   L+S+  S V G +D+++ NPPY+
Sbjct: 156 AMAYPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESNGMSQVPGPWDLVLCNPPYV 215

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S  +  L  E +  +P ++L GG DG+   R + + +   L+KD +  +EIG N+K   
Sbjct: 216 NSDSMGKLPAEYQA-EPELALAGGADGMDFIRRLLEDLPARLSKDAVVVLEIG-NEKPYF 273

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              F    +F ++      G+++VLL  
Sbjct: 274 EAAFPDLPVFWLDT---SSGDEQVLLIT 298


>gi|206900454|ref|YP_002250521.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12]
 gi|206739557|gb|ACI18615.1| bifunctional methyltransferase [Dictyoglomus thermophilum H-6-12]
          Length = 274

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 22/267 (8%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   +  V       +       L++ +   +   +    K   ++ I+  ++FYN
Sbjct: 16  AWLEAELLIAFVLNKERAFIYTI--DFLEEEKIEEIKRLLDLRKKGIPLNYIIKKKEFYN 73

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
               +      PR ETE+L++ A    L    +    R+ ++G G+G + + L KE    
Sbjct: 74  TEFFIEKGVLIPRNETEILIEVAKDSIL----REGYYRVAEVGVGSGNISITLAKEFENI 129

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVI 179
           K    DIS KA++IA+ NA  N VS++ +     +   +      F++++SNPPY+ S  
Sbjct: 130 KIYACDISPKAIKIARFNAEINKVSDKIEFFYGPFIYPLIYRNIDFEILLSNPPYVASYE 189

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG---LCSVEIG---YNQKV 233
              L  EV+  +P  +L GG DG   YRT+     + L   G   +  +EI    Y + +
Sbjct: 190 FPFLQKEVKR-EPWEALYGGWDGCEFYRTLF----KILKDKGKKFVAILEISPFIYKKVL 244

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVL 260
           ++V+ F +    +V +F+D  G  RVL
Sbjct: 245 NIVKRFFNN--VIVESFEDSLGYKRVL 269


>gi|148253253|ref|YP_001237838.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Bradyrhizobium sp. BTAi1]
 gi|146405426|gb|ABQ33932.1| [LSU ribosomal protein L3P]-glutamine N5-methyltransferase
           [Bradyrhizobium sp. BTAi1]
          Length = 322

 Score =  180 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 8/232 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVR 64
           ++   +     L   Q      + +   +   + + I  R    +    ++       + 
Sbjct: 58  EAAFLIGEALHLRPDQFESFVTARVTAAEGKQILDLITTRITTRKPAAYLVNKVYMRGLP 117

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPR-----IEKRDVVRILDLGTGTGAVCLALLKES 119
             +      PR     L+++    +         +   V  +LDL TG+G + +   +  
Sbjct: 118 FYVDERVIVPRSFIGELLETHFGGAEADGTSLIDDPLAVDSVLDLCTGSGCLAILASRHF 177

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P      VDIS  AL +A  N     + ER    + D F+ +    +D+I+SNPPY+++ 
Sbjct: 178 PNAMIDAVDISKDALAVAAKNVADYDLGERISLHRGDLFAPLSQRRYDLIISNPPYVDAE 237

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +  L  E    +P ++ DGG DGL     I      HL  +G    E+G +
Sbjct: 238 GMAGLPQECGA-EPALAFDGGADGLDIIHRILGQARDHLTAEGGLLCEVGRD 288


>gi|229024782|ref|ZP_04181218.1| Modification methylase, HemK [Bacillus cereus AH1272]
 gi|228736493|gb|EEL87052.1| Modification methylase, HemK [Bacillus cereus AH1272]
          Length = 232

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 6/209 (2%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +   +    +  ++G+ +F  +R+ +    F PR  TE LV    A S      
Sbjct: 8   EDLMKMVEMRVNGLPLEYVVGYTEFCGLRIEVDRGVFVPRKRTEFLVHQTEALS------ 61

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    I+DL  G+GAV  AL       +   VDI   A++ A  N    G       L  
Sbjct: 62  RSSDIIVDLCCGSGAVGAALASALGRVELYSVDIDPIAVQCASRNVTNFGGHAFEGDLYK 121

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               S++G  +++V+N PY+ + I+  L  E R  +P ++LDGG DGL+  R +A+    
Sbjct: 122 ALPDSLKGHVNILVANVPYVPTEIIKFLPREARLHEPNVTLDGGEDGLNILRRVAEEALL 181

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            L  DG   +E    Q      IF +  L
Sbjct: 182 WLALDGHLLIEASEVQAPQACEIFAAAGL 210


>gi|119714686|ref|YP_921651.1| HemK family modification methylase [Nocardioides sp. JS614]
 gi|119535347|gb|ABL79964.1| modification methylase, HemK family [Nocardioides sp. JS614]
          Length = 299

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 14/246 (5%)

Query: 22  VIVDPDSVLDDRQ---RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           V  + ++ L  R+      L   + R +  E + ++LG+ +F  +R+ +    F PR  T
Sbjct: 31  VFAEDEAALLAREAGDEAALAAMVARRVAGEPLEQVLGFAEFLGLRVAVEPGVFVPRLRT 90

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            LL   A+    P          +DL  GTGA+ +ALL   P  +    DI   A+  A+
Sbjct: 91  TLLARRAIRALEP------GDLAVDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCAR 144

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N            L       + G   V+V+N PY+ +  +  +  E RD + R++LDG
Sbjct: 145 RN--LPPDRVHEGDLYDALPGELRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDG 202

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGND 257
           G DGL   R +  G    L   G   VE    Q+        +  L   V +  D  GN 
Sbjct: 203 GADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAAAHVVAAGLDVTVASAADVDGN- 261

Query: 258 RVLLFC 263
            V++  
Sbjct: 262 -VVIGR 266


>gi|213420560|ref|ZP_03353626.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           E01-6750]
          Length = 191

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 10/194 (5%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
             PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   VDIS 
Sbjct: 2   LVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDAVDISP 57

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
            AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  +  L  E R  
Sbjct: 58  DALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYR-H 116

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +P + L  G DGL   R I      +L+ DG+   E+G N  V ++  +       +   
Sbjct: 117 EPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVG-NSMVHLMEQYPDVPFTWLEF- 174

Query: 251 KDYGGNDRVLLFCR 264
            D  G D V +  +
Sbjct: 175 -D-NGGDGVFMLTK 186


>gi|315657281|ref|ZP_07910163.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491753|gb|EFU81362.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 290

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 99/269 (36%), Gaps = 19/269 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V G             LD          + +      +  ++G   F 
Sbjct: 27  NAPGEARLLLEHVLGHRPGY-----GERLDGATWQRFFELVGQRATRVPLQHVMGIMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      F  RPETE +   A+  +   + +    R+LDLG G+GA+ L++  E   
Sbjct: 82  HLTLHARPGVFVVRPETEWVAQGAIDAAADWVRQGVAPRVLDLGCGSGALGLSIASEVHQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLFDVIVSNP 172
                VD+S  A+E+   NA   GV+ R              +   + +   F VI +NP
Sbjct: 142 SVLTCVDVSEAAVELTAENARFTGVAARVLLTDATDPQTLRNALVQAEIPPQFHVIATNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+   +      E    DP+++L  GG DGL   R                 +E   +Q
Sbjct: 202 PYV---VDPVTQPEAAQ-DPQLALYGGGTDGLERPRAFLAAAVAVALPGATIVMEHAESQ 257

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +V+  E+  L       D  G  R L
Sbjct: 258 GEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|269114935|ref|YP_003302698.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis]
 gi|268322560|emb|CAX37295.1| Protoporphinogen oxydase HEMK [Mycoplasma hominis ATCC 23114]
          Length = 235

 Score =  179 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 22/247 (8%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           ++D + +L +++R+ L   I +       K   + +I+G+++F NV L L   T  PR E
Sbjct: 1   MIDKEILLREKERYNLPLYISKKELRMLKKDIPVQKIIGYQEFQNVILNLKYKTLIPRYE 60

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE ++ +A  F       +   ++LDLG G+G + LA+ K++        DIS  A++  
Sbjct: 61  TEEVILAAYPFI------KKESKVLDLGCGSGLIGLAI-KKNKDANVTLSDISRFAIKQT 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +    + ++S+WF+ +   FDVIV NPPY++             ++P+ +L 
Sbjct: 114 KINAKLNNL--NVNVIRSNWFNKITSKFDVIVCNPPYLKKQKKLIKS---LKWEPKRALF 168

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
              +GL  Y+ I      +LN+ G+   E+          ++   K   V   KD    D
Sbjct: 169 ARDNGLFAYKKILKSAFNYLNEKGIIIFEVDPY-----CSLWFKNKFPNVLILKDINNKD 223

Query: 258 RVLLFCR 264
           R+ L  +
Sbjct: 224 RIALLAK 230


>gi|319793475|ref|YP_004155115.1| protein-(glutamine-n5) methyltransferase, ribosomal protein
           l3-specific [Variovorax paradoxus EPS]
 gi|315595938|gb|ADU37004.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Variovorax paradoxus EPS]
          Length = 292

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 104/264 (39%), Gaps = 9/264 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++   +     L    +    D+ +       +   +   +   +    +      
Sbjct: 28  NAFDEAAWLVLWRLKLPLDDIDAVADTAVSPADAGKVAALLDERITTRKPAAYLTKEAWL 87

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             V   +      PR     L+      S+         R+LDL TG G++ +      P
Sbjct: 88  QGVPFYIDERAIVPRSFIAELI---ADGSIDYWLGPHTQRVLDLCTGNGSLAVLAALTYP 144

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D+S +ALE+A  N   + +  R   ++SD  +++ G +D+++ NPPY+ S  +
Sbjct: 145 DVTVDAADLSVEALEVAAINVTRHELDARVKLVESDGLANLPGPYDLVLCNPPYVNSASM 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P +SL GG DG+   R +       +++  +  +EIG N++      F 
Sbjct: 205 ATLPAEYRA-EPELSLAGGTDGMDFIRKLFADAPSRMSEQAVLVLEIG-NERDYFDAAFP 262

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
             ++  +       G D+VLL  R
Sbjct: 263 QLEVVWLET---SAGEDQVLLVTR 283


>gi|13475623|ref|NP_107190.1| methyl transferase [Mesorhizobium loti MAFF303099]
 gi|14026379|dbj|BAB52976.1| probable methyl transferase [Mesorhizobium loti MAFF303099]
          Length = 230

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 8/218 (3%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
               G   F  + L ++     PRPETELL  +AL             RI+D+  GTG +
Sbjct: 10  AYGSGRAIFMGLELLVAPGALVPRPETELLGTTALGVL--HQMNLPAPRIVDMCCGTGNL 67

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFD 166
             A+    P  +    D++   +++A+ NA  +G+++R   LQ D F ++ G       D
Sbjct: 68  ACAIAHHIPAARVWASDLTDGCVDVARRNAAHHGMADRVSVLQGDLFDALSGLGLDRTID 127

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           VIV NPPYI    ++     + + +PR +   G  GLS +  +      +L   G+   E
Sbjct: 128 VIVCNPPYISEKRLEGDRAHLVELEPREAFAAGPYGLSIHMRVVKDAPLYLRPGGILLFE 187

Query: 227 IGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVLLFC 263
           +G  Q   V+ + E S++   + A  +  G  RV+L  
Sbjct: 188 VGLGQDRQVMGLLERSKQYENIRAVSNEAGEGRVVLGQ 225


>gi|262366650|gb|ACY63207.1| hypothetical protein YPD8_2534 [Yersinia pestis D182038]
          Length = 254

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 7/189 (3%)

Query: 30  LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   +R  +   ++R +     +  +     F  +   +      PR     L+++    
Sbjct: 68  LTSSERHRIVERVIRRVNERIPVAYLTNKAWFCGMEYYVDERVLVPRSPIGELIENRFDG 127

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            +          ILD+ TG+G + +A     P  +   VDIS   L + + N   +G+  
Sbjct: 128 LIHHQPN----HILDMCTGSGCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEH 183

Query: 149 RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +   ++SD F  +    +D+IV+NPPY+++  +  L  E R F+P + L  G DGL   R
Sbjct: 184 QVTPIRSDLFRDLPPIKYDLIVTNPPYVDAEDMADLPQEFR-FEPELGLAAGSDGLKLAR 242

Query: 208 TIADGVSRH 216
            I       
Sbjct: 243 RILACAPAL 251


>gi|270006518|gb|EFA02966.1| hypothetical protein TcasGA2_TC030615 [Tribolium castaneum]
          Length = 264

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 103/258 (39%), Gaps = 30/258 (11%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE--SIHRILGWRDFYNVRL 65
              L    G       V     +     F     +  +       +  +LG   F  + L
Sbjct: 25  EYILAHCLGTPR----VKKPIAVTLTHLFVYCRFLTFTNTGIWLPVQYVLGECYFRQLVL 80

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +S   F PRPETE LVD  L      I++++    L+L  G+GA+ L+LL+E P  KG 
Sbjct: 81  KMSPPVFIPRPETEQLVDIVLG----EIDRKNCRHFLELCCGSGAIALSLLQERPQIKGT 136

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
            +D S  A  + K NA   G+++R   +QS          FD+IVSNPPY          
Sbjct: 137 ALDQSKAACHLTKENAQKAGLNKRIRIIQSQLAQWHRCEKFDIIVSNPPY---------- 186

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-- 242
                     +LDGG+DGL   + I +  S  LN +G   +E+       +         
Sbjct: 187 -------DLQALDGGVDGLKVIKQILELSSECLNMNGKLFLEVEPRHPTLLQDYLTEFVP 239

Query: 243 KLFLVNAFKDYGGNDRVL 260
            L     +KD    DR +
Sbjct: 240 GLAYAATYKDLYAKDRFV 257


>gi|83319283|ref|YP_424136.1| HemK family modification methylase [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283169|gb|ABC01101.1| modification methylase, HemK family [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 270

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 11/242 (4%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +   +   ++ + D VL  +Q + L        K   +  IL  + FY+   
Sbjct: 23  DVYHILEHILNKNYQWIVSNLDYVLTKKQLYKLEQISKLLEKKYPLAYILKNKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D    F    I+  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FINKDVLIPRNESELIIDYVSEF----IKNNNDLLIVDLCTGSGCLGISCALLNKQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDC 182
             DIS KAL++A  N     +      L  D+ S +       +VI+SNPPYI+      
Sbjct: 139 LTDISYKALKVANKNIKRFNLKNTA-CLSGDFISVLIKDNIKANVIISNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIGYNQKVDVVRIFE 240
           L   V +++P I+L     GL  Y  +   + +   +NK  L  +E G+ QK  + ++  
Sbjct: 197 LDKNVIEYEPSIALFAPNKGLYFYEILIKNIDQIVDVNKKFLIVLEFGWLQKDSIEQLLI 256

Query: 241 SR 242
             
Sbjct: 257 KN 258


>gi|331703154|ref|YP_004399841.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328801709|emb|CBW53862.1| Modification methylase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 282

 Score =  179 bits (456), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +        ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQIFDLLKQNYPLAYILKSKYFYSNNF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FINKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVDC 182
             DIS KAL++A  N     ++     L     D         ++I+ NPPYI+      
Sbjct: 139 LTDISYKALKVANKNIKKFNLTNT-SCLNGNFIDVLIKNNLKANLIICNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVVRIFE 240
           +   V +F+P I+L     GL  Y  +   + + +  NK+ L  +E G+ QK  + ++  
Sbjct: 197 IDKNVIEFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWLQKDSIEQLLM 256

Query: 241 SR--KLFLVNAFKDYGGNDR 258
           +   K       KDY    R
Sbjct: 257 NNCLKYKW-EFKKDYNDYWR 275


>gi|89900828|ref|YP_523299.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Rhodoferax ferrireducens T118]
 gi|89345565|gb|ABD69768.1| modification methylase, HemK family [Rhodoferax ferrireducens T118]
          Length = 310

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 16/245 (6%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL-VD 83
            P + ++  Q   L  A  R    +    +        V   +      PR     L V+
Sbjct: 65  RPVAPVEQEQVATLIRA--RITSRQPAAYLTQEAWLMGVPFYVDPRAIVPRSLIAELLVN 122

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             + + L          +LDL  G G++ +      P       D+S +AL +A+ N   
Sbjct: 123 GGIDYWLSDATHA----VLDLCCGNGSLAVLAAMAYPDVTVDASDLSKEALAVARINVDK 178

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GG 199
           +G+  R   ++SD F+ + G +D+I+ NPPY+    +  L  E    +P ++LD    GG
Sbjct: 179 HGLGGRITLIESDGFARLPGRYDLILCNPPYVNLQSMAALPPEFHA-EPALALDGNRAGG 237

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            DG+   R +     +H+N+D +  +EIG N++      F   +   +       G D+V
Sbjct: 238 QDGMDFIRRLLREAPQHMNEDAVLVLEIG-NEREHFEAAFPRLEAIWLET---SAGEDQV 293

Query: 260 LLFCR 264
           LL  R
Sbjct: 294 LLLTR 298


>gi|332669393|ref|YP_004452401.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484]
 gi|332338431|gb|AEE45014.1| modification methylase, HemK family [Cellulomonas fimi ATCC 484]
          Length = 289

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 5/216 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   +VR +  E + ++LGW +F  +R+ ++   F PR  TE+LV  A+A +  R    
Sbjct: 62  RLETMVVRRVAGEPLEQVLGWAEFCGLRVAVAPTVFVPRRRTEVLVREAVALAPAR---- 117

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++DL  GTGAV LA++        V VD+   A+++A+ N    G       + + 
Sbjct: 118 -GAVVVDLCCGTGAVGLAVVSSLVDAVLVAVDVDPAAVQVARRNLDPVGGVALLGDVDAP 176

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S +EG  DV+ +N PY+ +  V  +  E RD + R++LDGG DGL   R +A    R 
Sbjct: 177 LPSHLEGRVDVLTANAPYVPTDEVRLMPPEARDHEARVALDGGPDGLDVQRRVAAAAPRW 236

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L   G   VE    Q         +  L       D
Sbjct: 237 LRPGGHLLVETSGRQAPATAAAMSAAGLVPWVVRDD 272


>gi|289767518|ref|ZP_06526896.1| methylase [Streptomyces lividans TK24]
 gi|289697717|gb|EFD65146.1| methylase [Streptomyces lividans TK24]
          Length = 280

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 13/243 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           RD+     R  G     V  + ++ L     R    LT  + R +    +  +LGW +F 
Sbjct: 28  RDAVVAALRAAGC----VFAEDEAALILTTARTAADLTALVGRRVGGLPLELVLGWAEFR 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R+ ++   F PR  TE LV  ALA +           ++DL  G+GAV  AL      
Sbjct: 84  GLRIAVAPGVFVPRRRTEFLVSEALAHA------PHANVVVDLCCGSGAVGAALAAALDR 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+  A+ N    G       L      ++ G  D++ +N PY+ +  V 
Sbjct: 138 PEVHAADVDPAAVRCARGNLADAGGRVYAGDLFDALPDALRGRVDILAANVPYVPTGEVA 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E RD +P ++LDGG DGL   R +A      L   G   VE    Q  D V  F  
Sbjct: 198 LLPAEARDHEPLVALDGGTDGLDVLRRVAAAAPDWLAPGGCLLVETSERQAPDAVGAFTR 257

Query: 242 RKL 244
             L
Sbjct: 258 AGL 260


>gi|301321173|gb|ADK69816.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
          Length = 282

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 14/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVDC 182
             DIS K+L++A  N     ++     L     D         ++I+ NPPYI+      
Sbjct: 139 LTDISYKSLKVANKNIKKFNLTNT-SCLNGNFIDVLIKNNLKANLIICNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVVRIFE 240
           +   V DF+P I+L     GL  Y  +   + + +  NK+ L  +E G+ QK  + ++  
Sbjct: 197 IDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWLQKDSIEQLLI 256

Query: 241 SR--KLFLVNAFKDYGGNDR 258
           +   K       KDY    R
Sbjct: 257 NNCLKYKW-EFKKDYNDYWR 275


>gi|126348204|emb|CAJ89925.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 273

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 6/210 (2%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L + + R +    +  +LGW +F  +R+ ++   F PR  TE LV  ALA +      
Sbjct: 51  QELMSLVDRRVTGLPLELVLGWAEFRGLRIAVAPGVFVPRRRTEFLVAEALAQA------ 104

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   ++DL  G+GAV  AL       +    D+   A+  A  N    G       L  
Sbjct: 105 PDAAVVVDLCCGSGAVGAALAAALDRPEVHAADVDPAAVRCALGNLADAGGQVHTGDLFD 164

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               ++ G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A    R
Sbjct: 165 ALPDALRGRVDILAANVPYVPTGEVALLPAEARDHEPLVALDGGADGLDVLRRVAAEAPR 224

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            L   G   VE    Q    V  F    L 
Sbjct: 225 WLAPGGCLLVETSERQAPAAVDAFARAGLT 254


>gi|42560703|ref|NP_975154.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|42492199|emb|CAE76796.1| protoporphyrinogen oxidase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
          Length = 282

 Score =  178 bits (453), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 14/260 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D +  L  +       +I + D  L  +Q + +   +    ++  +  IL  + FY+   
Sbjct: 23  DVYHILEHIINKDYQWIISNLDHKLTKKQIYKIDQILDLLKQNYPLAYILKSKYFYSNIF 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            ++ D   PR E+EL++D    F    ++  + + I+DL TG+G + ++    +   K +
Sbjct: 83  FVNKDVLIPRNESELIIDHVSEF----VKNNNDLLIVDLCTGSGCLGISCALLNDQNKVI 138

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVDC 182
             DIS K+L++A  N     +      L     D         ++I+ NPPYI+      
Sbjct: 139 LTDISYKSLKVANKNIKKFNL-INTSCLNGNFIDVLIKNNLKANLIICNPPYIDIND-QN 196

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEIGYNQKVDVVRIFE 240
           +   V DF+P I+L     GL  Y  +   + + +  NK+ L  +E G+ QK  + ++  
Sbjct: 197 IDKNVIDFEPSIALFAPNKGLYFYEILIKNIDKIVDTNKNFLIVLEFGWLQKDSIEQLLI 256

Query: 241 SR--KLFLVNAFKDYGGNDR 258
           +   K       KDY    R
Sbjct: 257 NNCLKYKW-EFKKDYNDYWR 275


>gi|160899050|ref|YP_001564632.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Delftia acidovorans SPH-1]
 gi|160364634|gb|ABX36247.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Delftia acidovorans SPH-1]
          Length = 325

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 9/238 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  +  +Q+  +       ++  +    +        V   +      PR     L+  A
Sbjct: 73  DQAVSAQQQAEVAELFAERIQTRKPAAYLTREAWLQGVPFYVDERAIVPRSFIAELL--A 130

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                  +  R   R+LDL TG G++        P  +  G DIS  AL +A+ N   + 
Sbjct: 131 DGSIDGWLSDRTR-RVLDLCTGNGSLACLAAMAWPEVEVTGADISADALAVARINVDRHE 189

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           ++ER   L+SD  +++ G +D+++ NPPY+ +  +  L  E +  +P ++L GG DG+  
Sbjct: 190 LAERVQLLESDGLAALPGPWDLVLCNPPYVNADSMLRLPAEYQA-EPELALAGGADGMDF 248

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            R +   +   L K+G+  +EIG N+K      F    +F ++      G+++VLL  
Sbjct: 249 IRRLLLDLPSRLAKEGVVVLEIG-NEKDFFEAAFPDLPVFWLDT---SSGDEQVLLIT 302


>gi|21225345|ref|NP_631124.1| methylase [Streptomyces coelicolor A3(2)]
 gi|9716169|emb|CAC01560.1| putative methylase [Streptomyces coelicolor A3(2)]
          Length = 280

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 13/243 (5%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVL---DDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           RD+     R  G     V  + ++ L     R    LT  + R +    +  +LGW +F 
Sbjct: 28  RDAVMAALRAAGC----VFAEDEAALILTTARTAADLTALVGRRVGGLPLELVLGWAEFR 83

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R+ ++   F PR  TE LV  ALA +           ++DL  G+GAV  AL      
Sbjct: 84  GLRIAVAPGVFVPRRRTEFLVSEALAHA------PHANVVVDLCCGSGAVGAALAAALDR 137

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+  A+ N    G       L      ++ G  D++ +N PY+ +  V 
Sbjct: 138 PEVHAADVDPAAVRCARGNLADAGGRVYAGDLFDALPDALRGRVDILAANVPYVPTGEVA 197

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E RD +P ++LDGG DGL   R +A      L   G   VE    Q  D V  F  
Sbjct: 198 LLPAEARDHEPLVALDGGTDGLDVLRRVAAAAPGWLAPGGCLLVETSERQAPDAVGAFTR 257

Query: 242 RKL 244
             L
Sbjct: 258 AGL 260


>gi|299531024|ref|ZP_07044437.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Comamonas testosteroni S44]
 gi|298720981|gb|EFI61925.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Comamonas testosteroni S44]
          Length = 315

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 19/270 (7%)

Query: 3   ALRDSHSFLCRVTGLS---------SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR 53
           A  ++   +    GL             V   P S+    Q   L     R    +    
Sbjct: 39  AEDEAAWLVLWKLGLPLDSELTPGAPESVAHHPVSLDAQAQIATLFE--ERIRSRKPAAY 96

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +        V   +   +  PR     L+      S+        V++LDL TG G++  
Sbjct: 97  LTNEAWLVGVPFYIDERSIVPRSFIAELL---ADGSIDGWLSDKTVQVLDLCTGNGSLAC 153

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                 P  +  G DIS  AL +A+ N   +G+ +R   L+S+  S V G +D+++ NPP
Sbjct: 154 LAAMAYPEVRVTGADISTDALAVARINVDKHGLQDRVTLLESNGISQVPGPWDLVLCNPP 213

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y+ S  +  L  E +  +P ++L GG DG+   R + + +   LNKD +  +EIG N+K 
Sbjct: 214 YVNSDSMGKLPAEYQA-EPELALAGGADGMDFIRRLLEDLPARLNKDAVVVLEIG-NEKP 271

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
                F    +F ++      G+++VLL  
Sbjct: 272 YFDAAFPDLPVFWLDT---SSGDEQVLLIT 298


>gi|332978419|gb|EGK15136.1| protein-(glutamine-N5) methyltransferase [Psychrobacter sp.
           1501(2011)]
          Length = 402

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 110/281 (39%), Gaps = 36/281 (12%)

Query: 6   DSHSFLCRVT--GLSSHQVIVDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYN 62
           ++ + +        S+ + I+  D  L   ++  +   +  R +  + +  ++    F +
Sbjct: 102 EAAAIVLHTLSLDWSADEQIL--DCRLTPSEKGEVLALLQSRIVYRKPLSYLVNLAYFCD 159

Query: 63  VRLTLSSDTFEPRPETELLVDSALA-------------------------FSLPRIEKRD 97
           +   +      PR     L+                                L   +   
Sbjct: 160 LPFYVDERVLIPRSPIAELIRQQFYPYFETNGVAQPLGADSTPDLPSFYLHGLENKQLYQ 219

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RILDL TG+  + +AL            DI   ALE+A  N   +G+  + + ++SD 
Sbjct: 220 PERILDLCTGSACIAIALASRFRDALVDAADIDTSALEVAAVNVEHHGMEHQLNLIESDL 279

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F  +  E  +++IV+NPPY+++  +  L  E    +P  +L  G DGL     I +  + 
Sbjct: 280 FDKIPAENQYELIVTNPPYVDAAAMAELPPEF-IHEPEHALAAGQDGLDLVHKILNEAAD 338

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
           +L+ +GL   E+G +    + + +   +   ++  +  GGN
Sbjct: 339 YLSPEGLLVCEVG-DSDWALRQAYPEIQFNWLSFAR--GGN 376


>gi|294658921|ref|XP_461263.2| DEHA2F21010p [Debaryomyces hansenii CBS767]
 gi|202953487|emb|CAG89652.2| DEHA2F21010p [Debaryomyces hansenii]
          Length = 311

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 36/291 (12%)

Query: 2   QALRDSHSF--LCRVT-GLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           QALRDS     L R    L   ++ +    + L   Q     +AI R  K E +  ILG 
Sbjct: 11  QALRDSRLLPPLLRANPNLEQAKLELKWIKNELPKSQ---WHDAIRRRSKLEPLQYILGS 67

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL 116
           + F  + +    +   PR ETE  V    A       + D  ++ILD+ TG+G + L L 
Sbjct: 68  QPFGALDILCRRNVLIPRWETEEWVMRISALVRKYHSQADGQLKILDVCTGSGCIPLLLN 127

Query: 117 KESPFFK-----GVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQSDWFSS------ 160
            E    +       G DIS +A++++ +N      +        +  + D F        
Sbjct: 128 YELSEVQNIPLKVHGCDISKEAVDLSMTNLKKYEENYPSSSHNIEFSKEDIFDENLLQNI 187

Query: 161 -VEGLFDVIVSNPPYIE------SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++    ++ SNPPYI        V+++ +   VR ++P I+L G       Y  +   V
Sbjct: 188 LLDKKLSLVTSNPPYIPIHDFNSPVLINGIEKSVRQYEPSIALVGEN---EFYEALVRNV 244

Query: 214 SRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
               N +G    E+GY  Q   V  +   +  +     KD  GN R ++  
Sbjct: 245 ILKSNPEGF-VFEVGYIEQVEFVANMLAQKSYWSCGMMKDSSGNVRCVVGW 294


>gi|254385550|ref|ZP_05000876.1| methylase [Streptomyces sp. Mg1]
 gi|194344421|gb|EDX25387.1| methylase [Streptomyces sp. Mg1]
          Length = 257

 Score =  178 bits (452), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 6/195 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L+  + R +  E +  ++GW  F  +R+ +    F PR  +E L   A A     +  R 
Sbjct: 34  LSQMLARRVAGEPLEIVVGWAGFCGLRMEVGEGVFVPRRRSEFLASEAAA-----LTPRA 88

Query: 98  VVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++DL  G GA+  A+        +    DI   AL  A+ N    G       L + 
Sbjct: 89  GAVVVDLCCGVGALGAAVADRVGGGVQLHAADIDPVALAYARRNVAPYGGRVHEGDLYAA 148

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              ++ G  DV+V N PY+ +  +  L  E RD +P +SLDGG DGL  +R +A   +  
Sbjct: 149 LPEALRGRVDVLVVNAPYVPTGELGLLPAEARDHEPLVSLDGGADGLDIHRRVAAQAAHW 208

Query: 217 LNKDGLCSVEIGYNQ 231
           L   G   +E G +Q
Sbjct: 209 LAPGGHLLIETGEHQ 223


>gi|125580052|gb|EAZ21198.1| hypothetical protein OsJ_36848 [Oryza sativa Japonica Group]
          Length = 335

 Score =  177 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 13/214 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
              +VR    S    PRPETE +VD        +++  +     DLGTG+GA+ +A+ + 
Sbjct: 126 WLRHVRDRRRSSVLIPRPETEAVVDMV-----AKVQGFEAGWWADLGTGSGAIAVAVARM 180

Query: 119 S-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPY 174
             P  +    D+S  A+++A+ N    G+ ++ +     WF  +E   G    ++SNPPY
Sbjct: 181 LGPEGRVFATDVSEVAIDVARLNVQRYGMQDKVEIRHGSWFEPLEDLKGKLMGVISNPPY 240

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKV 233
           I +  +  L  EV   +P+++LDGG DGL H   + +G+S  L   G    E  G  Q  
Sbjct: 241 IPTEDLPGLQPEVGWHEPKLALDGGKDGLEHLLHLCEGLSSVLKPGGFFVFETNGNKQSE 300

Query: 234 DVVRIFESR---KLFLVNAFKDYGGNDRVLLFCR 264
            +V   +++       V A  D+    R +   R
Sbjct: 301 FLVDFIQTKWDSSFRDVEAVLDFADIKRFVTGYR 334


>gi|16265092|ref|NP_437884.1| putative modification methylase protein [Sinorhizobium meliloti
           1021]
 gi|15141231|emb|CAC49744.1| putative modification methylase protein [Sinorhizobium meliloti
           1021]
          Length = 275

 Score =  177 bits (451), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 9/211 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  V L L+ D   PR ETELL  +A A    R        ++D+  G+G + L + +E 
Sbjct: 53  FMGVDLELAPDVLVPREETELLGRNAAAILTERA---GPATVIDMCCGSGNLALGIAEEV 109

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPY 174
           P  +  G D++   + +A+ N     + +R    Q D F       +EG  D+IV NPPY
Sbjct: 110 PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFTALAGEDLEGAVDMIVCNPPY 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++     +   +PR + DGG  G+S ++ +       L   G    E G  Q   
Sbjct: 170 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVAFLKPGGWLLFEFGEGQDRQ 229

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
              +    K    V   +D  G  RV L  R
Sbjct: 230 ATALLARTKAYEAVTFAEDSAGKPRVALARR 260


>gi|307825498|ref|ZP_07655716.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylobacter tundripaludum SV96]
 gi|307733384|gb|EFO04243.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Methylobacter tundripaludum SV96]
          Length = 310

 Score =  177 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 10/263 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
           AL ++ + +        +      +SVL   +R  + + I R +        +     F 
Sbjct: 40  ALDEAAALVLHTIHQPYNLADAYLESVLTLTERQAVIDMIDRRINERIPAAYLTHEAIFA 99

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +      PR     L++   A   P +++  VVRILDL TG+  + +A       
Sbjct: 100 GLSFYVDERVLVPRSPIAELIEQRFA---PWVDEEQVVRILDLCTGSACIAIACAYAFAD 156

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
                VD+S  AL +A+ N   + +++     QSD F  +    +D+IVSNPPY+     
Sbjct: 157 AYVDAVDLSADALAVAELNVAKHQLADAVTLYQSDLFKELPDTRYDIIVSNPPYVCLEEW 216

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + L  E R  +P +   GG  GL     I     ++L   G+  VE+G +    +   F 
Sbjct: 217 EQLPAEFRA-EPDMGFKGGHTGLDIVLRILVDADQYLADQGILVVEVGSS-AETLQNAFP 274

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
               + ++  +   G D V L  
Sbjct: 275 DVPFYWLSFER---GGDGVFLLT 294


>gi|255645193|gb|ACU23094.1| unknown [Glycine max]
          Length = 364

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 22/274 (8%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI--------VRSLKHESIHRILG 56
           R+    +     +  H +IV  D   D  +R  +   I         R  +      ++G
Sbjct: 94  RELKWLMEDA--VEDHSMIVKDD---DSDERVKMRVGIEELYCLWKQRVQERRPFQYVVG 148

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              + ++ L++      PRPETELLVD      +   E        DLGTG+GA+ + + 
Sbjct: 149 CEHWRDLVLSVQEGVLIPRPETELLVDFV-DDVVSENEDLKRGVWADLGTGSGALAIGIG 207

Query: 117 -KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNP 172
                  + +  D+S  A+ +A  N       ++ +  +  WF  +   EG+   +VSNP
Sbjct: 208 GVLGSEGRVIATDLSPVAVAVAAYNVQGYCFQDKIELREGSWFEPLKDMEGMLAGLVSNP 267

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           PYI S  +  L  EV   +PR++LDGG DG+     + DG +  L   G  + E  G  Q
Sbjct: 268 PYIPSKDISGLQAEVGRHEPRVALDGGTDGMDALLHLCDGAALMLKPAGFSAFETNGEQQ 327

Query: 232 KVDVVRIFESRK---LFLVNAFKDYGGNDRVLLF 262
              +V   E+ +      +    D+ G  R ++ 
Sbjct: 328 CRALVDYMENYRNGSFCNLEIRSDFAGILRFVIG 361


>gi|15828577|ref|NP_325937.1| protoporphirogen oxidase HEMK [Mycoplasma pulmonis UAB CTIP]
 gi|14089519|emb|CAC13279.1| PROTOPORPHIROGEN OXIDASE HEMK [Mycoplasma pulmonis]
          Length = 230

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 22/238 (9%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKH-----ESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           D ++ +++R+ L N I +  K        + +I+G+ +  NV++ +      PR ETE L
Sbjct: 5   DDLILEKRRYNLNNKISQKEKRLLKKNMPVQKIIGYIEMANVKIDICHKVLIPRYETEEL 64

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +     F       +D +++LDL  G+G + +AL K          DIS +A++  + N 
Sbjct: 65  IFLVKDFL------KDDMKVLDLCAGSGFIGIALSK-MKKIDLTLSDISLEAIKQIEKNV 117

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N V   +  +QSD F +++G FD+IVSNPPY+       +   V+ F+P  +L    +
Sbjct: 118 KINNVK-NYKIIQSDLFENIQGDFDIIVSNPPYLSYEQK--IDKSVKFFEPLKALYAPKN 174

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           G   Y  I +  S  L KDG+   EI    K     +F  +        KD  G +R 
Sbjct: 175 GWYFYEKIIEKASSFLKKDGMLFFEINPLHKE----LFLEKNFK---VIKDINGKNRF 225


>gi|269793493|ref|YP_003312948.1| methylase of HemK family [Sanguibacter keddieii DSM 10542]
 gi|269095678|gb|ACZ20114.1| putative methylase of HemK family [Sanguibacter keddieii DSM 10542]
          Length = 275

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 32/242 (13%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++H  L                     R    L+  + R +  E +  +LGW +   
Sbjct: 27  AEDEAHLLLAAA------------------RSADELSTLLARRVAGEPLELVLGWAELAG 68

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           VR+ L+   F PR  T LLV+ A A + P         +LDL  GTGAV LA+    P  
Sbjct: 69  VRVALAPGVFVPRQRTRLLVEQAAARARP------GSVVLDLCCGTGAVGLAVALAVPGV 122

Query: 123 KGVGVDISCKALEIAKSNAVTN----GVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
           +    D+   A+  A+ N            +    + D F ++     G  DV+V N PY
Sbjct: 123 ELHASDLDPDAVACARLNVEDTSSVAPRHPQGTVYEGDLFDALPDSLRGRVDVLVVNAPY 182

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           + +  V  +  E R  +  ++LDGG DGL   R +A      L + G   +E    Q   
Sbjct: 183 VPTAAVPLMPAEARVHEHLLALDGGSDGLEVQRRVAQRAGEWLARRGYLVIETSERQGPA 242

Query: 235 VV 236
            V
Sbjct: 243 TV 244


>gi|297197619|ref|ZP_06915016.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
 gi|297146802|gb|EFH28353.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sviceus ATCC 29083]
          Length = 263

 Score =  176 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 6/209 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L + + R +    +  ++GW +F  +R+T+S   F PR  TE LVD ALA +       
Sbjct: 42  ELADMVDRRVVGHPLELVVGWAEFRGLRVTVSPGVFVPRRRTEFLVDQALALA------P 95

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++DL  G+GAV  AL       +    DI   A++ A+ N    G       L   
Sbjct: 96  GASVVVDLCCGSGAVGAALAAALGPVELHSADIDPAAVDCARRNTADAGGQVHTGDLFEA 155

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +A    + 
Sbjct: 156 LPAGLRGRVDILAANVPYVPTEEVALLPTEARDHEPLVALDGGTDGLDVLRRVAAEAPQW 215

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L   G   VE    Q    V  F    L 
Sbjct: 216 LAPGGRLLVETSERQAPAAVDAFTRSGLT 244


>gi|298346213|ref|YP_003718900.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063]
 gi|298236274|gb|ADI67406.1| HemK family modification methylase [Mobiluncus curtisii ATCC 43063]
          Length = 290

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V G             LD          + +      +  ++G   F 
Sbjct: 27  NAPGEARLLLEHVLGHRPGY-----GERLDGATWQRFFELVGQRATRVPLQHVMGVMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      F  RPETE +   A+  +   + +    R+LDLG G+GA+ L++  E P 
Sbjct: 82  HLTLHARPGVFVVRPETEWVAQGAIDAAADWVRQGVAPRVLDLGCGSGALGLSIASEVPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLFDVIVSNP 172
                VD+S  A+E+   NA   GV+ R              +   + +   F VI +NP
Sbjct: 142 SVLTCVDVSEAAVELTAENARFTGVAARVLLADATDPQTLRNALVRAEIPPQFHVIATNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+   +      E    DP+++L  GG DGL   R      +          +E   +Q
Sbjct: 202 PYV---VDPVTQPEAAQ-DPQLALYGGGTDGLERPRAFLAAAAAVALPGATIVMEHAESQ 257

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +V+  E+  L       D  G  R L
Sbjct: 258 GEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|331699239|ref|YP_004335478.1| putative protein-(glutamine-N5) methyltransferase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953928|gb|AEA27625.1| putative protein-(glutamine-N5) methyltransferase, unknown
           substrate-specific [Pseudonocardia dioxanivorans CB1190]
          Length = 258

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 8/208 (3%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R    + + +I+GW  F  +R+ ++   F PR  T  L   A+A +      R
Sbjct: 35  ALAAMVARRAAGDPLEQIVGWAGFRGLRVVVAPGVFVPRQRTSFLAGLAVAAT------R 88

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++D+  G GAV LA+  ES   +    D+   A+  A+ N      +     L + 
Sbjct: 89  DGATVVDMCCGAGAVALAVRVESGAAQVHAADVDPAAVACARRN--LPPATVHQGDLYAA 146

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               + G  DV+V+N PY+ +  V  +  E R  +P ++LDGG DGL   R +  G  + 
Sbjct: 147 LPPDLRGRVDVVVANAPYVPTAAVALMPPEARLHEPMVALDGGGDGLDIARRVVAGAPQW 206

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G+  VE    Q   +  +F     
Sbjct: 207 LVAGGVLLVETSDEQAPVLRDVFARNGF 234


>gi|330466247|ref|YP_004403990.1| modification methylase, HemK family protein [Verrucosispora maris
           AB-18-032]
 gi|328809218|gb|AEB43390.1| modification methylase, HemK family protein [Verrucosispora maris
           AB-18-032]
          Length = 272

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 8/216 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +  E +  +LGW +F   R+T+    F PR        +A   +        
Sbjct: 41  LAVLVDRRVAGEPLEYLLGWAEFCGERITVVPGVFVPRAR------TAALVAAAEAVTGP 94

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVG-VDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             R+++L  G+GA+  AL +     + +  VD+   A+  A+ N     V      L   
Sbjct: 95  AARVVELCCGSGALTRALARRLHAPRLLAAVDVDPAAVACARGNLAELAVPVYAGDLFDA 154

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             ++  G  D++V+N PY+ +  +D L  E R ++  ++LDGG DGL+  R +A   +R 
Sbjct: 155 LPATWRGTLDLVVANAPYVPTAALDLLPAESRRYEALVALDGGPDGLAVLRRLAADATRW 214

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L   G   VE+G +Q   +  +     L L + F+D
Sbjct: 215 LAPGGHLVVEVGQSQVDLLATVLAEAGL-LPSTFRD 249


>gi|304390025|ref|ZP_07371979.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326507|gb|EFL93751.1| HemK family modification methylase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 290

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/269 (23%), Positives = 101/269 (37%), Gaps = 19/269 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  ++   L  V G             LD          + +      +  ++G   F 
Sbjct: 27  NAPGEARLLLEHVLGHRPGY-----GERLDGATWQRFFELVGQRATRVPLQHVMGIMYFR 81

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      F  RPETE +   A+  +   + +    R+LDLG G+GA+ L++  E P 
Sbjct: 82  HLTLRARPGVFVVRPETEWVAQGAIDAAADWVRQGVAPRVLDLGCGSGALGLSIASEVPQ 141

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVEGLFDVIVSNP 172
                VD+S  A+E+   NA   GV+ R              +   + +   F VI +NP
Sbjct: 142 SVLTSVDVSEAAVELTAENARFTGVAARVLHADATDPQTLRNALVCAEIPPQFHVIATNP 201

Query: 173 PYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+   +      E    DP+++L  GG DGL   R      +          +E   +Q
Sbjct: 202 PYV---VDPVTQPEAAQ-DPQLALYGGGTDGLERPRAFLAAAAAVALPGATIVMEHAESQ 257

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +V+  E+  L       D  G  R L
Sbjct: 258 GEALVKAAEALGLRGAQTRCDLAGRPRFL 286


>gi|296128764|ref|YP_003636014.1| modification methylase, HemK family [Cellulomonas flavigena DSM
           20109]
 gi|296020579|gb|ADG73815.1| modification methylase, HemK family [Cellulomonas flavigena DSM
           20109]
          Length = 273

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 7/240 (2%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
            P     D     L   + R +  E +   LGW  F  +RL +    F PR  TELL  +
Sbjct: 38  HPAGPTSDGLAHALEVLVARRVAGEPLETALGWVAFAGLRLQVGPGVFVPRRRTELLART 97

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A+  +    +      +++   G   V   ++ + P  +    D+   A+  A+ N    
Sbjct: 98  AVDLAR---DAGPAPVVVEACCGVAPVAALVVHDVPGARVHATDLDPAAVAWARRNLAGR 154

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G + R   L +     + G  DV+V+N PY+    +  +  E RD +PR++LDGG DG+ 
Sbjct: 155 G-AVREGDLLTPLPVRLRGHVDVLVANAPYVPHDAIATMPPEARDHEPRLALDGGRDGVD 213

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             R +       +   G   VE    Q         +   + V    D    D  ++  R
Sbjct: 214 VQRRLLTLAPAWVRPGGYVLVETSTRQAPATRAACPA--GWAVEVRHD-DDIDGTVVVAR 270


>gi|302545563|ref|ZP_07297905.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302463181|gb|EFL26274.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces himastatinicus ATCC 53653]
          Length = 270

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 7/210 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             +   + R      +  +LGW +F  +R+++ +  F PR  TE L              
Sbjct: 43  AEIDGMVDRRAAGLPLEHVLGWAEFRGLRISVDAGVFVPRRRTEFL------VERAAAVA 96

Query: 96  RDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++DL  G+GA+  AL+ E     +    DI   A+  A+ N    G +     L 
Sbjct: 97  RAGAVVVDLCCGSGALGAALVAELGGRAEWYAADIDPAAVRCARRNVEPAGGAVFEGDLY 156

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +++ G  DV+++N PY+ +  V  L  E R  + R++LDGG DGL   R +  G  
Sbjct: 157 EPLPAALRGRVDVLLANVPYVPTEEVGLLPPEARVHEARVALDGGADGLDVLRRVTAGAP 216

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             L   G    E    Q    + I     L
Sbjct: 217 GWLAPGGSLLFETSERQASRALDIVAGDGL 246


>gi|241855543|ref|XP_002416030.1| n6-DNA-methyltransferase, putative [Ixodes scapularis]
 gi|215510244|gb|EEC19697.1| n6-DNA-methyltransferase, putative [Ixodes scapularis]
          Length = 222

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 13/202 (6%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
              +  ILG  DF+N+ L +    F PRPETE LVD  L+             +LD+G G
Sbjct: 5   RLPVQYILGEWDFHNITLKMQPPIFIPRPETENLVDIVLSHLK---RTPKSSTVLDIGCG 61

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------- 160
           TGA+CLAL   +      GVD + KA++++K NA    ++      +++  S        
Sbjct: 62  TGAICLALGNAA-QIHCTGVDKNPKAVKLSKENATNLNLAHCATFHEAEISSHGIDTAYS 120

Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +  ++DVIVSNPPYI +     L  EV  ++   +L  G  GL   + I      +L 
Sbjct: 121 PLLNQVYDVIVSNPPYISTEEAKDLEPEVLRYEDHGALFAGPRGLDMVQNILRYSRTNLR 180

Query: 219 KDGLCSVEIGYNQKVDVVRIFE 240
             G   +E+G +    +  I  
Sbjct: 181 VGGHLFLEVGLSHPPLIRNILR 202


>gi|239815694|ref|YP_002944604.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Variovorax paradoxus S110]
 gi|239802271|gb|ACS19338.1| modification methylase, HemK family [Variovorax paradoxus S110]
          Length = 293

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAI-VRSLKHESIHRILGWRDF 60
            A  ++   +     L    +    D  +       +   +  R    +    +      
Sbjct: 28  NAFDEAAWLVLWRLKLPLDDIDAVADKAVSPADAGKVAALLDERIATRKPAAYLTKEAWL 87

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             V   +      PR     L+      S+         R+LDL TG G++ +      P
Sbjct: 88  QGVPFYVDERAIVPRSFVAELI---ADGSIDYWLGEHTQRVLDLCTGNGSLAVLAAMTYP 144

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D+S +ALE+A  N   + +  R   ++SD  +S+ G +D+++ NPPY+ S  +
Sbjct: 145 DITVDAADLSAEALEVAAINVTRHQLDARIRLVESDGLASLPGPYDLVLCNPPYVNSASM 204

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L  E R  +P ++L GG DG+   R +       ++++ +  +EIG N++      F 
Sbjct: 205 AALPAEYRA-EPELALAGGADGMDFVRQLFADAPSRMSEEAVLVLEIG-NEREYFEAAFP 262

Query: 241 SRKLFLVNAFKDYGGNDRV 259
             ++  +       G D+V
Sbjct: 263 QLEVVWLET---SAGEDQV 278


>gi|329898826|ref|ZP_08272488.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
           IMCC3088]
 gi|328920726|gb|EGG28195.1| Hypothetical adenine-specific methylase yfcB [gamma proteobacterium
           IMCC3088]
          Length = 300

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 89/224 (39%), Gaps = 7/224 (3%)

Query: 30  LDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L   Q   + + + +  ++ + +  I G                 PR     L +  L  
Sbjct: 61  LTRAQAERVNDWVNQRVIERKPLPYISGKAWLGGAEFFCDKRALVPRSP---LAEVILND 117

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             P         +LDL  G G++ +         + V  DI   AL +A+ N V + +  
Sbjct: 118 FQPWCNGVRGKEVLDLCCGGGSLGILAALNHAETQVVLADIDPDALALAQLNVVKHQLES 177

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               +QSD  +SV    FD+++ NPPY++S  +  L  E    +P I+L  G DGL   R
Sbjct: 178 HVQCVQSDVLASVPPRYFDIVLCNPPYVDSEDMSNLPAEYL-HEPHIALASGRDGLDFTR 236

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            +   + + L+ + +  +E+G +       +F    +  +   +
Sbjct: 237 QLLAQLPKFLHSNSVVFLELGNSW-EHFEELFPQIAITWLEFER 279


>gi|312194250|ref|YP_004014311.1| modification methylase, HemK family [Frankia sp. EuI1c]
 gi|311225586|gb|ADP78441.1| modification methylase, HemK family [Frankia sp. EuI1c]
          Length = 290

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 5/221 (2%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           +  L     R +    +  +LGW +F+  R+ +    F PR  TE LVD A    L    
Sbjct: 53  QAELDRLTDRRVAGIPLEHVLGWAEFHGQRILVDDGVFVPRRRTEFLVDLAAGRWLADRA 112

Query: 95  KRDVVR---ILDLGTGTGAVC--LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              V R   ++DL  G+GA+   +A L  S   +    DI   A+  A+ N    G    
Sbjct: 113 AEAVPRAAVVVDLCCGSGALGAVVAGLLRSSGVELHAADIDPAAVRCARRNLAPLGGQLY 172

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              L +     +    D+++ N PY+ +  +  +  E R+ +  ++LDGG DGL+  R +
Sbjct: 173 EGDLYAALPVGLRNRVDLLLVNAPYVPTAAIGLMPPEAREHESPVALDGGSDGLAVLRRV 232

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             G    L   G   VE    Q  +++    +  L      
Sbjct: 233 LAGAGDWLAVGGRLLVETSEAQATELIAAVSAAGLAGEAVH 273


>gi|307309486|ref|ZP_07589142.1| methyltransferase small [Sinorhizobium meliloti BL225C]
 gi|307320603|ref|ZP_07600017.1| methyltransferase small [Sinorhizobium meliloti AK83]
 gi|306893753|gb|EFN24525.1| methyltransferase small [Sinorhizobium meliloti AK83]
 gi|306900071|gb|EFN30691.1| methyltransferase small [Sinorhizobium meliloti BL225C]
          Length = 244

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 9/211 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  V L L+ D   PR ETELL  +A A    R        ++D+  G+G + L + +E 
Sbjct: 22  FMGVDLELAPDVLVPREETELLGRNAAAILTERA---GPATVIDMCCGSGNLALGIAEEV 78

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-----SSVEGLFDVIVSNPPY 174
           P  +  G D++   + +A+ N     + +R    Q D F       +EG  D+IV NPPY
Sbjct: 79  PLARVWGADLTDSTVALARRNVDRLSLGDRVVIRQGDLFAALAGEDLEGAVDMIVCNPPY 138

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++     +   +PR + DGG  G+S ++ +       L   G    E G  Q   
Sbjct: 139 ISTSRLEGDSAHLLASEPREAFDGGPYGISIHQRLIREAVAFLKPGGWLLFEFGEGQDRQ 198

Query: 235 VVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
              +    K    V   +D  G  RV L  R
Sbjct: 199 ATALLARTKAYEAVTFAEDSAGKPRVALARR 229


>gi|308190291|ref|YP_003923222.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
 gi|307625033|gb|ADN69338.1| protoporphyrinogen oxidase [Mycoplasma fermentans JER]
          Length = 237

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 18/245 (7%)

Query: 25  DPDSVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 3   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +VD  L          +   +LDL  G+G + LA+ K     K   VDIS +A++    
Sbjct: 63  EMVDIYLKKF-----AAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIE 117

Query: 140 N-AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           N  V  G +      QSD F++V+G FDVI+SNPPY+       L  +   F+P+I+L  
Sbjct: 118 NSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYLNCNDKS-LDWKALSFEPKIALCA 176

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             DG   Y  I      +L K+G   +EI         +I            KD  G  R
Sbjct: 177 PEDGWYFYDKILKKYKNYLKKNGWLIMEINPQHIEKWKQI------KGAQIKKDINGKYR 230

Query: 259 VLLFC 263
            +   
Sbjct: 231 FVFIQ 235


>gi|238810251|dbj|BAH70041.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 241

 Score =  176 bits (446), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 18/245 (7%)

Query: 25  DPDSVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 7   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 66

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +VD  L          +   +LDL  G+G + LA+ K     K   VDIS +A++    
Sbjct: 67  EMVDIYLKEF-----AAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIE 121

Query: 140 N-AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           N  V  G +      QSD F++V+G FDVI+SNPPY+       L  +   F+P+I+L  
Sbjct: 122 NSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYLNCNDKS-LDWKALSFEPKIALCA 180

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             DG   Y  I      +L K+G   +EI         +I            KD  G  R
Sbjct: 181 PEDGWYFYDKILKKYKNYLKKNGWLIMEINPQHIEKWKQI------KGAQIKKDINGKYR 234

Query: 259 VLLFC 263
            +   
Sbjct: 235 FVFIQ 239


>gi|319777685|ref|YP_004137336.1| protoporphyrinogen oxidase [Mycoplasma fermentans M64]
 gi|318038760|gb|ADV34959.1| Protoporphyrinogen oxidase [Mycoplasma fermentans M64]
          Length = 237

 Score =  175 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 18/245 (7%)

Query: 25  DPDSVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           + ++++ +++R+ L   I         ++  I  I+G+ ++ N R+ L      PR ETE
Sbjct: 3   NEETLILEKKRYGLEPKITEKEYELLRQNYPIQLIMGYVEYLNTRINLREQVLIPRYETE 62

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +VD  L          +   +LDL  G+G + LA+ K     K   VDIS +A++    
Sbjct: 63  EMVDIYLKEF-----AAENQEVLDLCCGSGFIGLAIKKNLRSAKVTLVDISDEAIKQTIE 117

Query: 140 N-AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           N  V  G +      QSD F++V+G FDVI+SNPPY+       L  +   F+P+I+L  
Sbjct: 118 NSIVNFGFNHDLKIYQSDLFTNVKGRFDVIISNPPYLNCNDKS-LDWKALSFEPKIALCA 176

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             DG   Y  I      +L K+G   +EI         +I            KD  G  R
Sbjct: 177 PEDGWYFYDKILKKYKNYLKKNGWLIMEINPQHIEKWKQI------KGAQIKKDINGKYR 230

Query: 259 VLLFC 263
            +   
Sbjct: 231 FVFIQ 235


>gi|28493401|ref|NP_787562.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist]
 gi|28572488|ref|NP_789268.1| peptide chain release factor methyltransferase [Tropheryma whipplei
           TW08/27]
 gi|28410620|emb|CAD67006.1| putative peptide chain release factor methyltransferase [Tropheryma
           whipplei TW08/27]
 gi|28476442|gb|AAO44531.1| protoporphyrinogen oxidase [Tropheryma whipplei str. Twist]
          Length = 285

 Score =  175 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 106/268 (39%), Gaps = 17/268 (6%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVD---PDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           +    +S   L     +S   V+         +   +       I +  +   +  ++  
Sbjct: 17  LSPRVESEILLSFACNISRECVMRHTLLSTGSVSPIEVEKYKKLIAQRSEGYPVQYLVRT 76

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             FY   + +      PRPETE+LV   L           +  + DLGTGTG + LAL  
Sbjct: 77  SGFYEHDILVGPGALVPRPETEILVQRVLTEL--CTTGTLIRSVWDLGTGTGCITLALAS 134

Query: 118 ESPFFKGVGVDISCKALEIAKSNAV--TNGVSERFDT-LQSDWFSSVE--GLFDVIVSNP 172
            +   + + VD S  A++ A+ N     N    + D  + SD  + +   G  DV+V+NP
Sbjct: 135 RATDIEYLAVDKSNSAIQWAEKNLRHLRNVTIRKADFTVDSDLLALLSEFGPPDVVVANP 194

Query: 173 PYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PY+   ++         ++P ++L  GG +GL   R +A   S  L   GL  +E   +Q
Sbjct: 195 PYLPQSVMHE------KYEPYMALCGGGPEGLDLLRAVARASSIVLANSGLLFLEHLPDQ 248

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRV 259
              +    E+     + +F D     R 
Sbjct: 249 SQSLRVSLEAMGFCDIESFCDLNDRLRF 276


>gi|290561725|gb|ADD38260.1| HemK methyltransferase family member 1 [Lepeophtheirus salmonis]
          Length = 305

 Score =  175 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 25/245 (10%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   +   L    +  I+    F  + L +    F PRPETE ++D A+AF        
Sbjct: 66  LLETLVQCRLSRMPLQYIIKEWPFRGLNLQMRPPVFIPRPETEKIIDLAIAF-------- 117

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVT---NGVSERFDT 152
           +   +L++G G+GA+ + LL E P  +  V VD S  A+++ K NA     N    + + 
Sbjct: 118 NPKSVLEIGCGSGAIAIGLLSECPSIQRCVAVDRSKMAVDLTKDNAKRLLGNQNQSKLEV 177

Query: 153 LQSDWFS------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           L +   S       +EG FD+++SNPPYI    +  +  E+  ++   +LDGG DGL   
Sbjct: 178 LCNPINSGGTFEYPIEGPFDLVISNPPYILRKDLHNVEPEIGLYEDLRALDGGPDGLDVI 237

Query: 207 RTIADGVSR--HLNKD-GLCSVEIGYNQKVDVV-RIFESRKLFLVNA---FKDYGGNDRV 259
           ++I   +S+   LN D     +E+       V+ +  E      ++      DY   +R 
Sbjct: 238 KSIFSWISQEGVLNSDSSRLILEVDPCHPSIVIPKYLEDSPGIPISTESIHTDYLERERF 297

Query: 260 LLFCR 264
           ++  +
Sbjct: 298 VIIKK 302


>gi|29827834|ref|NP_822468.1| methytransferase [Streptomyces avermitilis MA-4680]
 gi|29604935|dbj|BAC69003.1| putative methytransferase [Streptomyces avermitilis MA-4680]
          Length = 272

 Score =  175 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 6/208 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            +   + R      +  +LGW  F+ +R+T+    F PR  TE LVD A++ +      R
Sbjct: 42  EIATMVERRAAGLPLEHVLGWAGFHGLRITVDPGVFVPRRRTEFLVDLAVSLA------R 95

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +V  ++DL  G+GAV  AL       +    DI   A+  A+ N    G       L + 
Sbjct: 96  EVSVVVDLCCGSGAVAAALAASLDGPELHAADIDPAAVRCARRNLAACGGHVHEGDLFTA 155

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               + G  D++ +N PY+ +  V  L  E RD +P ++LDGG DGL   R +    SR 
Sbjct: 156 LPGHLRGRVDILAANVPYVPTDEVGLLPPEARDHEPLVALDGGSDGLDILRRVTAEASRW 215

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L+  G   VE    Q    V  F    L
Sbjct: 216 LSPGGSLLVETSERQASLAVETFTRGGL 243


>gi|85716035|ref|ZP_01047012.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
 gi|85697233|gb|EAQ35114.1| modification methylase HemK [Nitrobacter sp. Nb-311A]
          Length = 340

 Score =  175 bits (445), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 53/252 (21%), Positives = 102/252 (40%), Gaps = 6/252 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
             + ++   +     L   +V       +       + + I + +   +    +      
Sbjct: 71  DPVAEAAFLVGEAMRLHPDEVEPQAARRVPKAAGKRILDWIEQRIATRKPAAYLANRMYM 130

Query: 61  YNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +   +      PR     ++DS       L   +   + R+LDL TG+G + +   + 
Sbjct: 131 RGLSFYVDERVIVPRSFIGEILDSHFGGDEVLRLRDPETITRVLDLCTGSGCLAILAARA 190

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
            P       D+S  AL +A  N   +G+  R    Q D F++V+   +D+I+SNPPY+++
Sbjct: 191 FPNATVDATDLSAGALAVAARNVHEHGLDGRIQLAQGDLFAAVKNKRYDLIISNPPYVDA 250

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +  L  E    +PR++ DGG +G+   R I DG   +L   G    E+G   K  + +
Sbjct: 251 KGMAGLPRECLA-EPRMAFDGGAEGIDLVRRIIDGAESYLAPAGGLLCEVG-RCKPAIEK 308

Query: 238 IFESRKLFLVNA 249
            +    L  ++ 
Sbjct: 309 AYPQADLLWLDT 320


>gi|242086244|ref|XP_002443547.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor]
 gi|241944240|gb|EES17385.1| hypothetical protein SORBIDRAFT_08g021340 [Sorghum bicolor]
          Length = 336

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 13/203 (6%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           + L+D +  +L +   R         ++G   + ++ + ++     PRPETE +VD   A
Sbjct: 138 APLEDLEAMWLRHVRER----TPFQYVVGNEHWRDLVVAVAEGVLIPRPETEAVVDMVRA 193

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGV 146
                +E        DLGTG+GA+ +A+ +E     +    D+S  A+++A+ N    GV
Sbjct: 194 -----VEGFADGWWADLGTGSGAIAVAVARELGAHGRVFATDVSEVAIDVARLNVQRYGV 248

Query: 147 SERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            ++ +     WF  +   +G    ++SNPPYI +  +  L  EV   +P+++LDGG DGL
Sbjct: 249 QDKVEIRHGSWFEPLQDLKGKLMGVISNPPYIPTDDLPGLQPEVGWHEPKLALDGGKDGL 308

Query: 204 SHYRTIADGVSRHLNKDGLCSVE 226
            H   + +G+S  L   G    E
Sbjct: 309 EHLLHLCEGLSSVLEPGGFFVFE 331


>gi|319778151|ref|YP_004134581.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171870|gb|ADV15407.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 241

 Score =  175 bits (444), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 9/211 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +V L L+     PR ETELL   ALA    R        ++D+  G+G + LA+  E 
Sbjct: 19  FMSVMLELAPGVLVPRQETELLGQRALAILGDRA---PGPMVIDMCCGSGNLALAIAAEV 75

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPY 174
           P  +  GVD++   + +A+SNA    + +R    + D F ++EG       D+IV NPPY
Sbjct: 76  PSARVWGVDVTDSTVALARSNAERLALQDRVTIRKGDLFGALEGDGLIGAADMIVCNPPY 135

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I +  ++     + + +PR + DGG  G+S  + +    +  L  DG    E G  Q   
Sbjct: 136 ISTARLEGESAHLLEGEPREAFDGGPYGISIQQRLIRDATDFLKPDGWLLFEFGQGQDRQ 195

Query: 235 VVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           V  +    K +  V   KD  G  RV L  +
Sbjct: 196 VAALIARAKAYEPVTFAKDEVGMPRVALLRK 226


>gi|297560948|ref|YP_003679922.1| modification methylase, HemK family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296845396|gb|ADH67416.1| modification methylase, HemK family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 258

 Score =  174 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/225 (26%), Positives = 85/225 (37%), Gaps = 13/225 (5%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
             +I       D++ R      + R      +  +LGW  F  +R+ +    F PRP TE
Sbjct: 28  ADLIASAARTPDEQDR-----MVRRRCAGLPLEHVLGWALFCGLRVRVDEGVFVPRPRTE 82

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            L   A A   P          +DL  G+GA+   L            DI   ++  A+ 
Sbjct: 83  FLARQARALLTP------GAVAVDLCCGSGALGAVLAHTRADITLHAADIDAASVACARR 136

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           N    G       L       + G   V+V+N PY+ +  +  L  E R  + R +LDGG
Sbjct: 137 N--LPGHRVHRGDLYDALPPDLRGRVQVLVANVPYVPTDRIALLPAEARVHEDRRALDGG 194

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            DGL   R +A    R L   G   VE+G  Q +     F    L
Sbjct: 195 QDGLDLLRRVAADAGRWLAPGGRVLVEVGQEQVLAAREAFVRGGL 239


>gi|319785044|ref|YP_004144520.1| modification methylase, HemK family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170932|gb|ADV14470.1| modification methylase, HemK family [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 254

 Score =  174 bits (443), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
               G  DF  ++L ++     PRPETELL  +AL         R V R++D+  G G +
Sbjct: 34  AYSTGRTDFMGLKLVVAPGVLVPRPETELLGSTALNVLREL--NRPVPRVVDMCCGAGNL 91

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFD 166
             A+  + P  +    D++   +E    N    G++ R   LQ D F+S     +EG  D
Sbjct: 92  ACAIGYKVPTARVWASDLTDSCVETTCRNVAHLGLAGRISVLQGDLFNSFSGLELEGTID 151

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPYI    ++     + + +PR +   G  GLS +  +      +L + G+   E
Sbjct: 152 LVVCNPPYISEKRLENDRAHLMELEPREAFAAGPYGLSIHMRVIKEAQHYLRQGGMLLFE 211

Query: 227 IGYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFC 263
           +G  Q   V+ + E  K    +    +  G  RV+   
Sbjct: 212 VGLGQDRQVMSLVERSKAYESIRTVANKAGEARVVCAR 249


>gi|326779715|ref|ZP_08238980.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf.
           griseus XylebKG-1]
 gi|326660048|gb|EGE44894.1| putative protein-(glutamine-N5) methyltransferase [Streptomyces cf.
           griseus XylebKG-1]
          Length = 270

 Score =  174 bits (443), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 15/218 (6%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
                  L++ + R      +  +LGW DF+  R  +    F PR  TE LV      + 
Sbjct: 34  TAASADELSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLV------AR 87

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     ++DL  G+GA+  AL   S   +    D+   A+  A+ N    G     
Sbjct: 88  AAALAPRRSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRNIGDLG----- 142

Query: 151 DTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              + D F+ +     G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   
Sbjct: 143 HVYEGDLFAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGDDGLDVM 202

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           R +A      L   G   VE    Q+   V +  +  L
Sbjct: 203 RRVAAEAPAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240


>gi|156555049|ref|XP_001603796.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
           putative [Nasonia vitripennis]
          Length = 343

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 32/274 (11%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
              +  V               LDD Q   L     R L    +       DF + +L L
Sbjct: 75  EHIIAHVI-KDKE---AKQRESLDDMQLEKLKLLCNRRLSKMPLEYCTEESDFRDTKLKL 130

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S+  F P  +TE+LVD  L           +  +L++G G GA+ L+LL+       V +
Sbjct: 131 SAPIFIPERQTEILVDLLLKHV--DRSCSKICHVLEIGCGAGAISLSLLRSC-KCNIVAI 187

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDW-----------------FSSVEGLFDVIVS 170
           D +  A ++   NA   G+ +    L +                   F   E  FD IVS
Sbjct: 188 DTNMIACQLTLHNAKNLGLEDCLTILHATLESNGEIVCTSNLSNDRVFDLQEETFDFIVS 247

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP + +  +     E  D+    + +GG DGL   R +    S+ L KDG+  +E+   
Sbjct: 248 NPPCVPTSELPKWQKEYEDY---QARNGGKDGLRVIRPLLMYASKRLKKDGILLMEVLPQ 304

Query: 231 QKVDVVRIFESRKLFLV----NAFKDYGGNDRVL 260
           Q   +  +   ++  L+    + +KD   ++RV+
Sbjct: 305 QTEQIRSL-TEKQYPLILKFDHVYKDLSNDERVV 337


>gi|300781421|ref|ZP_07091275.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC
           33030]
 gi|300533128|gb|EFK54189.1| N5-glutamine methyltransferase [Corynebacterium genitalium ATCC
           33030]
          Length = 311

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 109/278 (39%), Gaps = 20/278 (7%)

Query: 6   DSHSFLCRVTGLSSH-QVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+      +  +SSH  +     + + D        A+ R  KHE + RI+G   F    
Sbjct: 30  DARFIAASLLDVSSHISLPFTSPTEIPDGFFARFEEAVSRREKHEPLQRIIGTAPFGIHD 89

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRD---------VVRILDLGTGTGAVCLAL 115
           L +    F PRPETE+L + A+A     ++               ++DLGTG+GA+ + +
Sbjct: 90  LKVGPGVFIPRPETEVLAEWAVAAFAEYLDSLSDDEIDAPDFQPVVVDLGTGSGALAIYI 149

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERF---DTLQSDWFSSVEGLFDVIV 169
            +       +GV+ S  AL  A++NA  +   G   +    D           G   ++V
Sbjct: 150 AQRVDADLVIGVEKSPVALAAARANADEHGGRGAEIQIISGDMTDPHLLEEYSGKVGLVV 209

Query: 170 SNPPYIE--SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +NPPY+         L  E+   DP  ++  G DG+   R +    +R L   G   +E 
Sbjct: 210 ANPPYVPFEPEESGALQPEIY-HDPPEAVFSGADGMDAIRGLIPVAARLLAPGGKLGIEH 268

Query: 228 GYNQKVDVVRIFESRK-LFLVNAFKDYGGNDRVLLFCR 264
             +       + +       V    D  G DR +   +
Sbjct: 269 DDSTAGRTRELVDKHGAFERVENLADLTGRDRFVTASK 306


>gi|167571408|ref|ZP_02364282.1| hemK protein [Burkholderia oklahomensis C6786]
          Length = 182

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 7/177 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  I+      +LDLGTG+GA+ +++  E P  +   +D S  AL++A+ NA       R
Sbjct: 1   LDAIDGIASPCVLDLGTGSGAIAVSIASERPDARVWALDRSAAALDVARRNARKLLAPAR 60

Query: 150 ----FDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                  L+SDW+++++    F VIVSNPPYI          ++R F+PR +L    DGL
Sbjct: 61  PGGPLQFLESDWYAALDSGRRFHVIVSNPPYIARHDPHLAEGDLR-FEPRGALTDDDDGL 119

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           +  R I  G    L   G   +E GY+Q   V    E+     V +  D    +R  
Sbjct: 120 AAIRAIVAGAHAFLAPGGALWIEHGYDQAAAVRARLEAAGFADVESLADLASIERAT 176


>gi|296139487|ref|YP_003646730.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
 gi|296027621|gb|ADG78391.1| modification methylase, HemK family [Tsukamurella paurometabola DSM
           20162]
          Length = 245

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/254 (24%), Positives = 97/254 (38%), Gaps = 42/254 (16%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A +++       TG                     L + + R    E +  +LGW +F  
Sbjct: 15  ADQEAQLLGESATG-------------------AELEDLVRRRCSGEPLEHLLGWAEFRG 55

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            RL++    F PR  TELL + A        ++     +++L  G   +      +    
Sbjct: 56  TRLSVGPGAFVPRRRTELLAELA--------DEARPSVLVELCCGVAPIASTCTAD---- 103

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           +   VDI    L  A+ NA           L  D F+ +     G  DVI +N PY+ S 
Sbjct: 104 EVYAVDIDPVPLVYARENA------PSATVLAGDLFAPLPRDLCGRTDVIAANAPYVPSA 157

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +  +  E RD +PR +LDGG DGL+ +R IA      L + G+  +E G  Q     R+
Sbjct: 158 AIATMPAEARDHEPRAALDGGPDGLALHRRIAAEARMWLAEGGVVLIETGRYQAEYTERL 217

Query: 239 FESRKLFLVNAFKD 252
             +          D
Sbjct: 218 LRAAGFT-ARVVAD 230


>gi|229104015|ref|ZP_04234691.1| Modification methylase, HemK [Bacillus cereus Rock3-28]
 gi|228679359|gb|EEL33560.1| Modification methylase, HemK [Bacillus cereus Rock3-28]
          Length = 260

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 86/217 (39%), Gaps = 7/217 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +        +  ++G+ +F  +R+ +    F PR  TE LV  A A        
Sbjct: 36  EDLKRMVEMRADGLPLEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVHQAEALLCF---- 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                I+DL  G+GAV +AL       +   VDI   A+  A  N    G       L  
Sbjct: 92  --GDIIVDLCCGSGAVGVALAAALGRVELYSVDIDPVAVRCASRNVTNFGGHVFEGDLYK 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               +++G  + +V+N PY+ +  +  L  E R  +P+++LDGG DGL   R +A     
Sbjct: 150 ALPHALKGHVNTLVANVPYVPTEAIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFL 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            L   G   +E    Q      IF    L      +D
Sbjct: 210 WLAPGGHLLIETSEMQANQTFEIFAGAGLTT-RVARD 245


>gi|71894204|ref|YP_278312.1| protoporphirogen oxidase HemK [Mycoplasma synoviae 53]
 gi|71850992|gb|AAZ43601.1| Protoporphirogen oxidase HemK [Mycoplasma synoviae 53]
          Length = 241

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 11/219 (5%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           K+  I +I+G  +  NV++ LS     PR ETE ++  A  +    I+     ++LDL T
Sbjct: 28  KNYPIQKIIGHVEMLNVKIDLSYKVLIPRYETEEVILKAFEY----IKNDSSFKVLDLAT 83

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + LA+ K+    K    DIS  AL  A  NA  N +      + S+WFS+V   F+
Sbjct: 84  GSGFIALAIKKKFSSAKIYASDISKIALRQASKNAQINKLD--IGLIHSNWFSNVNQKFN 141

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +I+ NPPYI     + L   ++ ++P+ +L    DG   Y+ I     ++L  + L   E
Sbjct: 142 LIICNPPYI--GKYEELSESIKKYEPKKALYAKDDGFYFYKKIISQAPKYLQNEKLLIFE 199

Query: 227 IGY---NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +     ++  ++        +  +  F D     R+ + 
Sbjct: 200 LSALHLDKWNEIKNQKVKYNINSITFFNDIANLLRIAII 238


>gi|182439064|ref|YP_001826783.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178467580|dbj|BAG22100.1| putative methylase [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 270

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 15/218 (6%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
                  L++ + R      +  +LGW DF+  R  +    F PR  TE LV      + 
Sbjct: 34  TAASADELSSLVERRAAGLPLEHVLGWADFHGRRFAVDPGVFVPRRRTEFLV------AR 87

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                     ++DL  G+GA+  AL   S   +    D+   A+  A+ N    G     
Sbjct: 88  AAALAPRRSVVVDLCCGSGALGAALAAVSDAAELHACDVEPAAVRCARRNIGDLG----- 142

Query: 151 DTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              + D F+ +     G  DV+++N PY+ +  V+ L  E R  +PR++LDGG DGL   
Sbjct: 143 HVYEGDLFAPLPATLRGRVDVLLANVPYVPTDDVELLPAEARVHEPRVALDGGGDGLDVM 202

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           R +A      L   G   VE    Q+   V +  +  L
Sbjct: 203 RRVAAEAPAWLAPGGSLLVEASERQRDTAVEVLRAAGL 240


>gi|227820142|ref|YP_002824113.1| methyl transferase [Sinorhizobium fredii NGR234]
 gi|227339141|gb|ACP23360.1| probable methyl transferase [Sinorhizobium fredii NGR234]
          Length = 275

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 12/225 (5%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L +  + R++    F ++ + L+ D   PR ETELL  +A+     R      V ++D+ 
Sbjct: 48  LANSPLPRLV---RFMDIEIELAPDVLVPREETELLGRNAVQRLRDRT---GPVMVIDMC 101

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-- 163
            G+G + L +    P  + +G D++   + +A+ N     + +R    Q D F+++EG  
Sbjct: 102 CGSGNLALGIAAALPLAQVLGADLTDSTVALARRNVGLLSLQQRVSIRQGDLFAALEGDG 161

Query: 164 ---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                D+IV NPPYI +  ++     + D +PR + DGG  G+S ++ +       L   
Sbjct: 162 LEGEIDMIVCNPPYISTSRLEGDSAHLLDSEPREAFDGGPYGISIHQRLIRDAVAFLKPG 221

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           G    E G  Q      +    K +  V+   D  G  RV +  +
Sbjct: 222 GWLLFEFGEGQDRQAAALLSRAKAYEPVSFAHDAQGKPRVAIVRK 266


>gi|150376492|ref|YP_001313088.1| HemK family modification methylase [Sinorhizobium medicae WSM419]
 gi|150031039|gb|ABR63155.1| modification methylase, HemK family [Sinorhizobium medicae WSM419]
          Length = 280

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 9/212 (4%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F ++ L L+     PR ETELL  +A A      E      ++D+  G+G + L +  E
Sbjct: 59  HFMDIDLELAPGVLVPREETELLGRTAAAILR---EAARPATVVDMCCGSGNLALGIAAE 115

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPP 173
            P  +  G D++   + +A+ N     + +R    Q D F+++ G       D+IV NPP
Sbjct: 116 VPLARVWGADLTDSTVALARRNVERLALGDRVFVRQGDLFAALAGEGLEEAVDMIVCNPP 175

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           YI +  ++     +   +PR + DGG  G+S ++ +       L   G    E G  Q  
Sbjct: 176 YISTSRLESDSAHLLASEPREAFDGGPYGISIHQRLIREAVAFLKPGGWLLFEFGEGQDR 235

Query: 234 DVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
               +    K +  V+   D  G  RV    R
Sbjct: 236 QTAALLARTKAYDAVSFATDAAGKPRVARVRR 267


>gi|228953746|ref|ZP_04115786.1| Modification methylase, HemK [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229080682|ref|ZP_04213201.1| Modification methylase, HemK [Bacillus cereus Rock4-2]
 gi|228702620|gb|EEL55087.1| Modification methylase, HemK [Bacillus cereus Rock4-2]
 gi|228805980|gb|EEM52559.1| Modification methylase, HemK [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 260

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +        +  ++G+ +F  +R+ +    F PR  TE LV  A A        
Sbjct: 36  EELKRMVEMRANGLPLEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEALLCF---- 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GAV +AL       +   VDI   A+  A  N    G       L  
Sbjct: 92  --GDIVVDLCCGSGAVGVALAAALGRIELYSVDIDPVAVRCASRNVTNFGGHVFEGDLYK 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               +++G  + +V+N PY+ +  +  L  E R  +P+++LDGG DGL   R +A     
Sbjct: 150 ALPHALKGHVNTLVANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFL 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            L   G   +E    Q      IF    L 
Sbjct: 210 WLASGGHLLIETSEMQATQTFEIFAGAGLT 239


>gi|153842021|ref|ZP_01993463.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio parahaemolyticus AQ3810]
 gi|149745421|gb|EDM56672.1| protein methyltransferase HemK (Protein-glutamine
           N-methyltransferase hemK) (Protein-(glutamine-N5) MTase
           hemK) [Vibrio parahaemolyticus AQ3810]
          Length = 154

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 4/152 (2%)

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSN 171
           AL  E P  + +GVD+  +A E+A+ NA    +       Q  WF  +     F +IVSN
Sbjct: 1   ALASELPNRQVMGVDLKQEAKELAEYNAAQLNIK-NVTFDQGSWFEPIAEGTKFALIVSN 59

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PPYI+         +VR F+P+ +L    +GL+  R I+D   ++L + G  + E GY+Q
Sbjct: 60  PPYIDEKDPHLSQGDVR-FEPKSALVADENGLADIRHISDLARQYLEEGGWLAFEHGYDQ 118

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              V  I        V   KDYGGNDRV L C
Sbjct: 119 GEAVREIMSGFGYQQVVTEKDYGGNDRVTLGC 150


>gi|229070918|ref|ZP_04204146.1| Modification methylase, HemK [Bacillus cereus F65185]
 gi|228712308|gb|EEL64255.1| Modification methylase, HemK [Bacillus cereus F65185]
          Length = 260

 Score =  172 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 84/210 (40%), Gaps = 6/210 (2%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +        +  ++G+ +F  +R+ +    F PR  TE LV  A A        
Sbjct: 36  EDLKRMVEMRANGLPLEYVVGYAEFCGLRIEVDRGVFVPRQRTEFLVRQAEALLCF---- 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GAV +AL       +   VDI   A+  A  N    G       L  
Sbjct: 92  --GDIVVDLCCGSGAVGVALAAALGRIELYSVDIDPVAVRCASRNVTNFGGHVFEGDLYK 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               +++G  + +V+N PY+ +  +  L  E R  +P+++LDGG DGL   R +A     
Sbjct: 150 ALPHALKGHVNTLVANVPYVPTETIKLLPQEARLHEPKMALDGGEDGLDIQRRVAKEAFL 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            L   G   +E    Q      IF    L 
Sbjct: 210 WLASGGHLLIETSEMQATQTFEIFAGAGLT 239


>gi|254282238|ref|ZP_04957206.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR51-B]
 gi|219678441|gb|EED34790.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [gamma proteobacterium NOR51-B]
          Length = 301

 Score =  172 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 7/214 (3%)

Query: 37  FLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
            LT+ + + ++    +  I+G     ++          PR     LV        P    
Sbjct: 63  RLTDFVQQRIEGRKPVAYIIGQAWLGHLSFHCDERALVPRSPLMGLV---YERFSPWWVG 119

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               RI+D+  G G++ +    E P  + + +DI  KAL +A+ N   +G+  +  T+++
Sbjct: 120 GVPERIVDVCCGGGSLGILAATEFPGAEVLCLDIDEKALALAEENIARHGLQGQISTVRA 179

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D    +     D+I++NPPY+++  +  L  E   ++PR++L+ G DGL     +    +
Sbjct: 180 DLLGPLSPDSVDIILANPPYVDAQDMADLPAEY-SWEPRLALEAGDDGLDLVHRLLVQAA 238

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             L + G   +E+G +    + R F   +   + 
Sbjct: 239 SRLRESGYLFLEVGNSW-PAMERAFPRFEFLWLE 271


>gi|260905207|ref|ZP_05913529.1| HemK family modification methylase [Brevibacterium linens BL2]
          Length = 267

 Score =  172 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 57/248 (22%), Positives = 89/248 (35%), Gaps = 13/248 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L      +S              +   L     R +  E + +I+GW DF  
Sbjct: 18  AEDEARILLEAAQEAASSDF---------GDRHSVLGRLRARRVAGEPLEQIVGWVDFAG 68

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R+ ++   F PR  T LL   A    L      +  R L+   G GAV   + +     
Sbjct: 69  QRIAVAPGVFVPRQRTTLL---AQQSILAVQTAGESARFLEAFCGVGAVATTVSRAFHGT 125

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D    AL  A++N          D L      ++ G FDVI + PPY+       
Sbjct: 126 QIHLGDHDETALGAARANVGAQATPHLLDCLVG-LPQALTGSFDVISAVPPYVPDSAAQY 184

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L  E  +++P  +L GG DGL   R +       L   G+  +E+G  Q+       E+ 
Sbjct: 185 LPHEAAEYEPATALFGGADGLDLVRRLITESRDWLAPGGVLLIELGSQQQQPATDFAEAL 244

Query: 243 KLFLVNAF 250
                   
Sbjct: 245 GFIGTRTL 252


>gi|291278534|ref|YP_003495369.1| modification methylase HemK family [Deferribacter desulfuricans
           SSM1]
 gi|290753236|dbj|BAI79613.1| modification methylase, HemK family [Deferribacter desulfuricans
           SSM1]
          Length = 278

 Score =  172 bits (437), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 30/263 (11%)

Query: 10  FLCRVTGLSSHQVIVDPDSV--LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
            L  + GL+   + +  D +  +DD+ +        +      ++ I   R+FY +   +
Sbjct: 33  LLSYLFGLNYSDLFLHMDDIFLIDDKVKEVFLKVKRK----YPVNYITQNRNFYGLDFYI 88

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + D   PR ETE+LV+ A+      +       ILDL TG+G + ++++K S    G+GV
Sbjct: 89  NEDVLIPRYETEVLVEEAIKRVKKGV-------ILDLCTGSGCIPISVMKNSGIDFGIGV 141

Query: 128 DISCKALEIAKSNAVTNGVS-----ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           DIS  AL++AK+N              FD L+ D     +  FD+I  NPPY++      
Sbjct: 142 DISFNALKVAKANKKRLLSDKKLKFVCFDVLEIDKIFKDKIEFDLITCNPPYVD------ 195

Query: 183 LGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  E  D   ++P  +L    +GL  Y+ +   + +   K+G    EI  ++   +  IF
Sbjct: 196 INGEYEDSIMYEPSEALFADDNGLKFYKKLLYKLPKLCKKNGFIIFEIPCDKLDMIKNIF 255

Query: 240 ESRKLFLVNAFKDYGGNDRVLLF 262
             +    +   KD  G +RVL++
Sbjct: 256 YGK---DIELVKDLSGKERVLIW 275


>gi|307330646|ref|ZP_07609785.1| modification methylase, HemK family [Streptomyces violaceusniger Tu
           4113]
 gi|306883707|gb|EFN14754.1| modification methylase, HemK family [Streptomyces violaceusniger Tu
           4113]
          Length = 272

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 6/207 (2%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R      +  +LGW +F  +R+++ +  F PR  TE LV+ A+A + P      
Sbjct: 42  LLAMVDRRAAGLPLEHVLGWAEFRGLRISVDAGVFVPRRRTEFLVEQAVALARP------ 95

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DL  G+GA+  AL       +    DI   A+  A+ N    G +     L    
Sbjct: 96  GAVVVDLCCGSGALGAALASALSEVELYAADIDPVAVACARRNVEPAGGTVYEGDLYEPL 155

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +++ G  DV+++N PY+ +  V  L  E R  + R++LDGG+DGL   R +  G  R L
Sbjct: 156 PAALRGRVDVLLANVPYVPTEEVGLLPPEARVHEARVALDGGVDGLDVLRRVTAGAGRWL 215

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
              G    E    Q    + I     L
Sbjct: 216 TPGGSLLFETSGRQAASAMDIVAGDGL 242


>gi|255071039|ref|XP_002507601.1| methyltransferase [Micromonas sp. RCC299]
 gi|226522876|gb|ACO68859.1| methyltransferase [Micromonas sp. RCC299]
          Length = 428

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 44/288 (15%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           H++  + D +L +       + + R  +   +  I     + ++ L +S     PRPETE
Sbjct: 141 HEIPPEHDILLRESLPELRFSWLKRLRERVPLQYITSTCFWRDLTLVVSPAVLIPRPETE 200

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK---------------G 124
           L+V+     +L           +DLGTG+GA+ +++  E    +                
Sbjct: 201 LMVEHV-KGALTTRPVLCRGPWVDLGTGSGALAISVAAEILKTRTLNALEIGCSESKPLV 259

Query: 125 VGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSVE---------GLFDVIVS 170
             VDIS  +++IA+ N         G        Q  WF  +E         G    I+S
Sbjct: 260 HAVDISSSSVQIARCNISRYDKLAEGGKLGVQVHQGSWFEPLELQDIVHDRAGTLAGIIS 319

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GY 229
           NPPYI S  +  L  EVR  +P ++L+ G  G+     +  G SR+L   G   +E  G 
Sbjct: 320 NPPYISSNEMRVLQPEVRYHEPWLALESGKSGVEALEVLCKGASRYLLPGGFLLLETGGG 379

Query: 230 NQKVDVVRIFESRK-------------LFLVNAFKDYGGNDRVLLFCR 264
           +Q   VV++  S K                +    D+ G  R +   +
Sbjct: 380 DQVTHVVQLLHSFKKGNLRENGGAVPIFENIQIHADHRGFRRFISAWK 427


>gi|170093107|ref|XP_001877775.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647634|gb|EDR11878.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 300

 Score =  172 bits (436), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 101/264 (38%), Gaps = 40/264 (15%)

Query: 38  LTNAIVRSLKHESIHRILGW----------------RDFYNVRLTLSSDTFEPRPETELL 81
           L + + R    E +  ILG                 + F  + L        PRPETE  
Sbjct: 38  LEDMVARRALGEPLQYILGTYHMTLLLSFLTLATGSQPFGPLNLLTRPPVLIPRPETEHW 97

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV--DISCKALEIAKS 139
           V +      P  +  + + +LDLGTG+G + L L    P         DIS  A+ +A  
Sbjct: 98  VLNLAESLSPAAQ--NPISLLDLGTGSGCIPLLLCHLWPPGSVHACGVDISPHAMRLATD 155

Query: 140 NAVTNGVSERFDTLQSDW------------FSSVEG-----LFDVIVSNPPYIESVIVDC 182
           NA   G+ +    +                   V G      FDVI SNPPYI       
Sbjct: 156 NAALCGIPQNASAISPQNTFKATFANFLADHFPVGGLRTALPFDVITSNPPYIPWEEYIN 215

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGYNQKVDVVRIFE 240
           L   V D++   +L GG  GL  Y  IA  + R   L+ + L ++E+G  Q   V ++  
Sbjct: 216 LPRSVSDYEDPKALFGGPTGLEFYHAIARFLCRKGVLSPNALVALEVGREQAEKVEQVVL 275

Query: 241 SRKLFL-VNAFKDYGGNDRVLLFC 263
           S  LF     + D  G  R ++  
Sbjct: 276 STGLFRHTEIWLDPWGKQRTVIAR 299


>gi|229085996|ref|ZP_04218218.1| Modification methylase, HemK [Bacillus cereus Rock3-44]
 gi|228697307|gb|EEL50070.1| Modification methylase, HemK [Bacillus cereus Rock3-44]
          Length = 260

 Score =  171 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 8/225 (3%)

Query: 29  VLDDRQR-FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           ++ + Q    L   +        +  ++G+ +F ++R+ +    F PR  TE LV  A  
Sbjct: 28  LISEAQTPEDLKKMVEMRADGLPLEYVVGYAEFCSLRIEVDRGVFVPRQRTEFLVHQAET 87

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            S           ++DL  G+GAV +AL       +   VDI   A+  A  N    G  
Sbjct: 88  LSCS------GDIVVDLCCGSGAVGVALAAALGRVELYSVDIDPVAVRCAGRNVTDFGGH 141

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                L      S+ G  +++V+N PY+ +  +  L  E R  +P+++LDGG DGL   R
Sbjct: 142 VFEGDLYKALPRSLRGHVNILVANVPYVPTKAIKLLPQEARLHEPKVALDGGEDGLDIQR 201

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +A      L   G   +E    Q      IF    L      +D
Sbjct: 202 RVAAEAFLWLAPGGHLLIETSEMQAPQTFEIFSGAGLTT-KVARD 245


>gi|258654968|ref|YP_003204124.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
 gi|258558193|gb|ACV81135.1| modification methylase, HemK family [Nakamurella multipartita DSM
           44233]
          Length = 276

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 23/250 (9%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A +++   L    G                     L   +   +    +  ++GW +F  
Sbjct: 30  AEQEAQLLLAAADG------------------PAELARLVRARVAGTPLEYLVGWVEFDG 71

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ ++   F PR  + LLV +A+      +  R    +++L  G GA+ LA+    P  
Sbjct: 72  LRIAVTDGVFVPRQRSRLLVRAAVG----HLAGRPEPLVVELCCGCGAIGLAIAAAVPGV 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    DI   A+  A+SN    G +     L +     + G  DV+V+N PY+ +  +  
Sbjct: 128 RLHAADIDPVAVGCARSNLAPIGAAVYAGDLFAALPGRLRGAVDVLVANAPYVPTAAIAL 187

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +  E RD +P I+LDGG DG    R +  G    L  DG+  VE+G +Q   +   F + 
Sbjct: 188 MPPEARDHEPGIALDGGPDGTRVLRRVIAGAVAWLAPDGVLLVEVGTSQIPLITTAFTAA 247

Query: 243 KLFLVNAFKD 252
            L      +D
Sbjct: 248 GLAP-QIVRD 256


>gi|304373117|ref|YP_003856326.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma hyorhinis HUB-1]
 gi|304309308|gb|ADM21788.1| Protein-(Glutamine-N5) methyltransferase, release factor-specific
           [Mycoplasma hyorhinis HUB-1]
          Length = 243

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 20/240 (8%)

Query: 28  SVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           ++L ++QR  L   I +        +  I +I+G+    N++L ++     PR ETE L+
Sbjct: 14  ALLKEKQRNNLELIINQKEAKLLKTNIPIQKIIGFVCMQNLQLKINKKVLIPRYETEELI 73

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A  +            +LDLG G+G + LA+ K +   + V  DI  +A+  +K NA 
Sbjct: 74  LQAYKYI------NGQSTVLDLGCGSGFIGLAIAKNTKAKQVVLSDIDSQAILQSKINAK 127

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +  +   +QSD F +++   FDVI+ NPPY++      L   V D++P  +L     
Sbjct: 128 LNKL--KVKIIQSDLFDNLKKYKFDVIICNPPYLD-FEKSKLDSSVLDYEPWNALFAKQK 184

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   Y+ I       L   G+   EI           F ++         D     R+ +
Sbjct: 185 GNYFYQKILKQYKNFLKPKGVILFEIDQTNLE-----FFNKYYPEFKLIYDINNKVRIAV 239


>gi|224418991|ref|ZP_03656997.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|253827938|ref|ZP_04870823.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|313142503|ref|ZP_07804696.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|253511344|gb|EES90003.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
 gi|313131534|gb|EFR49151.1| protoporphyrinogen oxidase [Helicobacter canadensis MIT 98-5491]
          Length = 278

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 56/276 (20%), Positives = 89/276 (32%), Gaps = 35/276 (12%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   +S   L          +       L         + I R    E I  I+    FY
Sbjct: 21  RPRLESEILLSHTLNQPRIYLHSHSTEELSLFHEMLFMDLIQRRKNLEPIEYIINKVSFY 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--------- 112
                +      PRPETE+LVD A         K               +          
Sbjct: 81  GKEFYVDRGVLIPRPETEILVDKARNIITQNNCKN--------------IAEIGIGSGII 126

Query: 113 ---LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFD 166
              LALL  +        DI  +AL     N     +S      +S +    +     FD
Sbjct: 127 SIMLALLLPNSNLNFYASDIIPEALFNTHVNLEKFKIS-NVKLYKSAFLDFNKKENITFD 185

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +++SNPPYI+   +         F+P+ +L GG  G      I        NK      E
Sbjct: 186 LLISNPPYIKKGEILPTP---LSFEPQKALFGGERGDEILHQIIKLAYE--NKIPHLICE 240

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           +GYNQ+  +  + ++     +  ++D    +R  + 
Sbjct: 241 MGYNQRESIENLMQNIPHQKLEFYQDLANLERGFII 276


>gi|303273570|ref|XP_003056145.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462229|gb|EEH59521.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 423

 Score =  171 bits (434), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 112/307 (36%), Gaps = 46/307 (14%)

Query: 3   ALRDSHS-FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           A RD            SS   + D    L +           R      +  +     + 
Sbjct: 116 AARDLREDLRNSRFHCSSIDYLRDNAVPLREGLDELRALWNTRLRYRVPLQYLTATSYWR 175

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L ++     PRPETELLVD   +    +    +   + DLGTG+GA+ +++  E   
Sbjct: 176 ELVLVVTPAVLIPRPETELLVDIIKSAIHEKPSLVESPWV-DLGTGSGALAISIAAEISK 234

Query: 122 FK---------------GVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSV 161
            K                  V++  +A  IA+ N         G S      +  WF  +
Sbjct: 235 VKHSLNPAQSSREEEVIVHAVELCPRAAAIARHNVSRYRNITGGGSGGVSVYEGSWFRPL 294

Query: 162 E----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIA 210
           E          G F  IVSNPPYI S     L  EVR  +P I+L+GG   GL    ++ 
Sbjct: 295 EVRGLTATVGCGTFAGIVSNPPYIPSKDFLSLQPEVRCHEPWIALEGGPGPGLDALISVC 354

Query: 211 DGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFL------------VNAFKDYGGND 257
            G + HL   G  ++E  G  Q  +V  + E   L              V   +DY G +
Sbjct: 355 TGAAVHLLGGGFLALETNGGRQAHEVAELLEHMSLQDTSGCDKMPIFEKVKVHRDYNGTE 414

Query: 258 RVLLFCR 264
           R +   +
Sbjct: 415 RFVSAWK 421


>gi|260944776|ref|XP_002616686.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720]
 gi|238850335|gb|EEQ39799.1| hypothetical protein CLUG_03927 [Clavispora lusitaniae ATCC 42720]
          Length = 289

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 29/277 (10%)

Query: 4   LRDSHSF------LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           +R + +       L R TG S  +   +   + ++  R   TNA+ R    E +  ILG 
Sbjct: 9   VRQARAISPRLAPLLRATG-SLERAHSELKWIENELPRHKWTNAVNRRACLEPLQYILGS 67

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + F ++ +        PR ETE    +  +     I++ +  RILD  TGTG + L L  
Sbjct: 68  QPFGSLDILCGRGVLIPRWETEEWATAVASI----IKEFESPRILDACTGTGCIPLLLKH 123

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPY 174
           E P  K    D S  AL +A  N     +         D F S    +  FD++ +NPPY
Sbjct: 124 ELPHAKVQAFDFSEDALRLAGLNKEKFDID--VSFHYGDVFDSNMKFDHPFDLVTANPPY 181

Query: 175 IESVIVD------CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           I     +           VR ++PR +L G    L  Y  + D + R     G    E+G
Sbjct: 182 IPINDYERPMLLSGPEKSVRLYEPRSALVGH---LEFYHALVDNIVRASQCSG-IIFELG 237

Query: 229 Y-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           Y  Q         +   +L   + D  G  R ++  +
Sbjct: 238 YEEQAQATAEKLGTA--WLCGRYNDSAGRLRCVVGWK 272


>gi|118359720|ref|XP_001013098.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89294865|gb|EAR92853.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 564

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 33/231 (14%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           +      I  ++G  +F ++ L +      PR ET  LV+     S  + + +     L+
Sbjct: 4   KRRAMMPIQYVIGEWEFRDLLLKMKPPVLIPRNETSYLVELVNKLSKQKQKCQ----FLE 59

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER---------FDTLQ 154
           +G GTGA+ L+LLKE+  F G+ +D     +E+AK N   N +  +             Q
Sbjct: 60  IGIGTGAISLSLLKENSQFTGIAIDKQKFCIELAKQNLNLNKIDPQRLQLIHLECLKFFQ 119

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           ++   + +  FD IVSNPPYI +  V  L  +VR F+ +++LDGG DGL           
Sbjct: 120 NNLNQNPDQQFDFIVSNPPYIPTSQVQNLDKQVRKFEDKVALDGGSDGLDI--------- 170

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESR------KLFLVNAFKDYGGNDRV 259
                 G  ++E+     + + + FE        K      FKD    DR 
Sbjct: 171 -----GGYIALEVDVTHNLLLQQYFEKNTYGWKDKYKKAQFFKDQYERDRF 216


>gi|330723257|gb|AEC45627.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Mycoplasma hyorhinis MCLD]
          Length = 243

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 20/240 (8%)

Query: 28  SVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           ++L ++QR  L   I +        +  I +I+G+    N++L ++     PR ETE L+
Sbjct: 14  ALLKEKQRNNLELIINQKEAKLLKTNIPIQKIIGFVCMQNLQLKINKKVLIPRYETEELI 73

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A  +            +LDLG G+G + LA+ K +   + V  DI  +A+  +K NA 
Sbjct: 74  LQAYKYI------NGQSTVLDLGCGSGFIGLAIAKNTKAKQVVLSDIDSQAILQSKINAK 127

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +  +   +QSD F +++   FDVI+ NPPY++      L   V D++P  +L     
Sbjct: 128 LNKL--KVKIIQSDLFDNLKKYKFDVIICNPPYLD-FEKSKLDSSVLDYEPWNALFAKQK 184

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           G   Y+ I       L   G+   EI           F ++         D     R+ +
Sbjct: 185 GNYFYQKILKQYKSFLKPKGVILFEIDQTNLE-----FFNKYYPEFKLIYDINNKVRIAV 239


>gi|193216650|ref|YP_001999892.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
 gi|193001973|gb|ACF07188.1| protoporphyrinogen oxidase [Mycoplasma arthritidis 158L3-1]
          Length = 235

 Score =  170 bits (432), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 24/249 (9%)

Query: 23  IVDPDSVLDDRQRFFL-----TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           ++D   +L +++R+ L        +    K   + +I+G+++  NV + LS     PR E
Sbjct: 1   MIDKHILLREKERYNLPLEISNKELKLLKKDCPVQKIIGYQEMQNVFIDLSYKVLIPRYE 60

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE L+ S+  +           ++LDLG G+G + LA+ K++       VDIS +A++ +
Sbjct: 61  TEELIISSYQYL------NKNSKVLDLGCGSGFIGLAI-KKNIGCYVTLVDISKQAIKQS 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           + NA  N +      ++S+WFS+V  +  FDVIVSNPPY+              ++P+I+
Sbjct: 114 ELNAKLNNLD--VKIIKSNWFSNVKNDERFDVIVSNPPYLNRKNHFAKS---LSYEPKIA 168

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
           L     GL  Y  I      +LN+ G    EI  N       IF  +    V   KD  G
Sbjct: 169 LFAKKSGLFSYMQILKKAKNYLNESGKLIFEIDQN-----SAIFLKQNYPKVIVKKDING 223

Query: 256 NDRVLLFCR 264
            DR+ +  +
Sbjct: 224 KDRIAILQK 232


>gi|58265656|ref|XP_569984.1| S-adenosylmethionine-dependent methyltransferase [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|134108951|ref|XP_776590.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259270|gb|EAL21943.1| hypothetical protein CNBC0830 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57226216|gb|AAW42677.1| S-adenosylmethionine-dependent methyltransferase, putative
           [Cryptococcus neoformans var. neoformans JEC21]
          Length = 362

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 28/262 (10%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L   +   +   + R    E +  ILG   F  + +        PRPET  +     +  
Sbjct: 100 LPPIEEERVEELVKRRSAGEPLQYILGSAGFGPINIRCQKPVLIPRPETAHIFTRLSSTI 159

Query: 90  LPRIEKRDVVR-------ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           L  +              +LD+ TGT  + L L   +P    VG+D S  A+ +  +NA 
Sbjct: 160 LSSVSSLTSSSRPSAHLPVLDICTGTACIPLLLAHLNPLLTAVGIDNSPAAVSLGGANAK 219

Query: 143 TNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
             G+  R      + F+        EG   ++VSNPPYI     + L   V+D++   +L
Sbjct: 220 ILGMEGRVKVRYGNVFAESTRLLGREGKVGLVVSNPPYIPFKEWEQLPKSVKDWESPAAL 279

Query: 197 DGG----IDGLSHYRTIADGVSRHLNKDG-----------LCSVEIGYNQKVDVVRIFES 241
            G      +GL+ Y  IA+ +   L ++G             +VE+G  Q   V  IF  
Sbjct: 280 LGDGKNYGEGLAFYERIAEMLPDLLLEEGEMEKKGWKGVPRVAVEVGLGQARKVEEIFRC 339

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
            ++     ++D  G +R+++  
Sbjct: 340 GQINNTEVWQDQFGIERMVVGW 361


>gi|225164775|ref|ZP_03727005.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae
           bacterium TAV2]
 gi|224800606|gb|EEG18972.1| Site-specific DNA-methyltransferase (adenine-specific) [Opitutaceae
           bacterium TAV2]
          Length = 266

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 24/236 (10%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDS-----VLDDRQRFFLTNAIVRSLK-HESIHRILGWRD 59
           ++   L R          +D D      +    Q   +  A+ R L+       I     
Sbjct: 2   EALYLLLRTLK-----YPLDSDESVLSHIPTPDQVRAIEAALHRRLQQRIPAAYITREAW 56

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLK 117
                  +      PR     ++      +LPR+         + D+ TG+G + + L  
Sbjct: 57  LGEHNFYVDERVIIPRSYFVEII-----PTLPRLFPSGVTPQNLADVCTGSGCLAVLLAH 111

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNP 172
           + P  +   +D+S  AL++A  N   + ++ R     SD   ++        +D+I+SNP
Sbjct: 112 QFPSARVDALDLSRDALDVAAINIRNHKLTTRVHLHASDVLDALPPPPLGPTYDLILSNP 171

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           PY  S  VD    E +  +PR++ DGG DGL   R +       L   GL  +E+G
Sbjct: 172 PYEPSAHVDNQAPEFKA-EPRLAHDGGPDGLIIIRKLLRQARDRLAPHGLVLMEVG 226


>gi|302535838|ref|ZP_07288180.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
 gi|302444733|gb|EFL16549.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces sp. C]
          Length = 261

 Score =  169 bits (430), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 7/208 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L   + R +  E +  ++GW +F  +R+ + +  F PR  TE L   A+  + P      
Sbjct: 36  LAGMVARRVDGEPLEHVVGWAEFCGLRVEVGAGAFVPRRRTEFLAREAVELARP------ 89

Query: 98  VVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +LDL  G GA+  A+  + P   +    DI   AL  A+ N    G +     L + 
Sbjct: 90  GAVVLDLCCGVGALGAAVAAQVPGGVELHAADIDPAALAYARRNVAPYGGAVWEGDLYAA 149

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + + G  DV++ N PY+ +  +  +  E RD +P +SLDGG DGL  +R +A G    
Sbjct: 150 LPAGLRGRVDVLMVNAPYVPTGEIGLMPPEARDHEPLVSLDGGADGLDVHRRVAAGALEW 209

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L   G   +E    Q            L
Sbjct: 210 LAPGGHLLMETSARQAPLTASALTGGGL 237


>gi|269957405|ref|YP_003327194.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269306086|gb|ACZ31636.1| modification methylase, HemK family [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 298

 Score =  169 bits (429), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 54/224 (24%), Positives = 83/224 (37%), Gaps = 28/224 (12%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L   + R +  E +  +LGW  F   R  ++   F PR  +ELLV  ALA   P   +R
Sbjct: 66  LLEALVARRVGGEPLEHVLGWVAFAGRRWAVAPGVFVPRQRSELLVAQALAAVRPTTAER 125

Query: 97  DVVRIL-DLGT--------------GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
               ++ DL                G+G V               VD+   A   A  N 
Sbjct: 126 TTATVVVDLCCGNGALGGAVAAALPGSGVVL------------HAVDLDRAATACAAQNL 173

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G       L +    ++ G  D+++ + PY+ +  V  +  E R+ +P  +LDGG D
Sbjct: 174 APFGGVVHTGDLYAPLPLTLRGRVDLLLCHAPYVPTAAVALMPHEAREHEPLTALDGGPD 233

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFESRKL 244
           GL   R         L   G    E+G + Q      +  +  L
Sbjct: 234 GLEILRRAIWEAPAWLAPGGSLLFEVGDDTQVAATTALLRTAGL 277


>gi|300786119|ref|YP_003766410.1| HemK protein [Amycolatopsis mediterranei U32]
 gi|299795633|gb|ADJ46008.1| HemK protein [Amycolatopsis mediterranei U32]
          Length = 254

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 8/209 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   + R +    +  +LGW +F+ +R+T+    F PR  T  LVD A++ + P    
Sbjct: 33  AELGALVERRVAGLPLEHLLGWAEFHGLRVTVRPGVFVPRHRTGFLVDVAVSLAPPD--- 89

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LDL  G+GA+  A     P  +    D+   A+E A+ N     + +    L  
Sbjct: 90  ---PVVLDLCCGSGALGAAFAAARPPRELHAADVETAAVECARLNLPDAHIYQ--GDLYD 144

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              SS+ G  D++++N PY+ S  V  +  E R  +P ++LDGG DGL   R +A     
Sbjct: 145 ALPSSLRGGVDILLANVPYVPSDAVSTMPPEARLHEPLVALDGGADGLDLARRVAADAPG 204

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            L   G   +E    Q   +  I  +  L
Sbjct: 205 WLAPGGTLLIESSERQAPVLAEILAAAGL 233


>gi|315502385|ref|YP_004081272.1| modification methylase, hemk family [Micromonospora sp. L5]
 gi|315409004|gb|ADU07121.1| modification methylase, HemK family [Micromonospora sp. L5]
          Length = 263

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 7/215 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F   R+ +    F PR  T      AL           
Sbjct: 42  LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRT------ALLVDAAAALAGP 95

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDL  G+GA  + L            DI   A+  A+ N    GV      L    
Sbjct: 96  APVVLDLCCGSGAAAVVLHDRLTPGWLAAADIDPVAVACARRNLEPLGVPVYQGDLFDAL 155

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +   G  D++V+N PY+ +  V  L  E R ++  ++LDGG DGL+  R +A G +  L
Sbjct: 156 PAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASGAAEWL 215

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
              G   VE    Q  ++   F +  L      +D
Sbjct: 216 APGGHVVVESSVAQAPELCAAFTAVGLEP-TVVRD 249


>gi|213401603|ref|XP_002171574.1| mitochondrial N(5)-glutamine methyltransferase MTQ1
           [Schizosaccharomyces japonicus yFS275]
 gi|211999621|gb|EEB05281.1| mitochondrial N(5)-glutamine methyltransferase MTQ1
           [Schizosaccharomyces japonicus yFS275]
          Length = 303

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/278 (21%), Positives = 105/278 (37%), Gaps = 29/278 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA R+  +++C   G           SV    +   L        +   +  +LG   F 
Sbjct: 24  QARRE-WTWMCEELG----------PSVKSHARMLRLQRMCKARGRGVPLQYVLGSESFG 72

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALLK 117
            + L      F PR ET   V   L +     E+       + ++D+ TG+G +   +  
Sbjct: 73  PLNLQCRKGVFIPRWETYEWVLRCLPYMKQLYEQAHDDSRPLEVVDMCTGSGCIAQFVAS 132

Query: 118 ESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVS 170
                     +D+S KAL +A+ N        R   +++D    V+         DV++ 
Sbjct: 133 ALHDRVHVTAIDVSMKALALARHNNREEVCRGRVGFVRADVLKQVDVWLPFVARCDVLLC 192

Query: 171 NPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSVEI 227
           NPPYI     V      VR ++P ++L     G + YR +   + R          + E+
Sbjct: 193 NPPYISDADLVRVTSSSVRRYEPLLALCADECGDAFYRKVLREIHRAAVYRPR-YIAFEV 251

Query: 228 GY-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           G   Q   VV++  +   +  + +KD  G +R +   R
Sbjct: 252 GDKEQAKRVVQL--ASPHWNASIWKDSAGLERCVFLER 287


>gi|160903109|ref|YP_001568690.1| HemK family modification methylase [Petrotoga mobilis SJ95]
 gi|160360753|gb|ABX32367.1| modification methylase, HemK family [Petrotoga mobilis SJ95]
          Length = 268

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L ++        + D +  + ++  +FL   +    +   I  I     F      ++ 
Sbjct: 24  ILSKIEDKDISFYLKDWEVEISEQTFYFLVKHLK---EGYPIEYITKKVSFLGNEFFVNE 80

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +   PR ETE LV  A+      I+ +D+  ++D+GTG+G + +++ K+ P  K    DI
Sbjct: 81  NVLIPRIETEDLVILAINL----IKNKDIKNVIDIGTGSGVIAISIKKQLPKIKVRASDI 136

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD---VIVSNPPYIESVIVDCLGLE 186
           S  A+++A+ NA   GV+  F     D         D   +I+SNPPY+E+  V+     
Sbjct: 137 SEDAIKVAQYNAEKLGVNIGFKI--GDCLDPFLEEIDEVQLIISNPPYVETSFVEK--NR 192

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              ++PRISLDGG DG S ++ I++    HL K      E           I  +     
Sbjct: 193 FLSYEPRISLDGGYDGQSFFKKISNYS--HLLKSKYLLFETSEFTVRKTAEILSALG--K 248

Query: 247 VNAFKDYGGNDRVLLF 262
           V    D    +R +  
Sbjct: 249 VQILPDSFKKERFIFI 264


>gi|319948467|ref|ZP_08022603.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dietzia cinnamea P4]
 gi|319437887|gb|EFV92871.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Dietzia cinnamea P4]
          Length = 322

 Score =  169 bits (428), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 14/267 (5%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFY 61
           A  ++      V G+   ++++  D  LD      +   +   ++    +  +LG     
Sbjct: 27  AHVEAQLICAHVLGIDRGRLMIADD--LDATAVAEVERIVAARVRDRTPLQYLLGRAASG 84

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L +    F PRPETELLV+  LA +LP         ++DL  G+G + L +    P 
Sbjct: 85  RLDLAVGPGVFIPRPETELLVEWTLA-ALPAPTPEPGPVVVDLCAGSGTIALEIAHARPD 143

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-------ERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            +   V++   ALE  + NA     +        R D    +  + + G    +VSNPPY
Sbjct: 144 ARVHAVELHDAALEWLRRNAHERAAAGDTPVEVHRADATDIETLAHLRGRVAAVVSNPPY 203

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           I   + D L  EV   +P  +L GG DGL     + D  +  L   GL +VE        
Sbjct: 204 IP--VTDDLPAEVLAHEPATALFGGGDGLVVVVALVDLAAALLAPGGLLAVEHDDTTGDA 261

Query: 235 VVRIFESR-KLFLVNAFKDYGGNDRVL 260
           V  +  +      V    D  G  R +
Sbjct: 262 VAAVVSAEGGFGTVEQHTDLAGRPRFV 288


>gi|302865840|ref|YP_003834477.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC
           27029]
 gi|302568699|gb|ADL44901.1| modification methylase, HemK family [Micromonospora aurantiaca ATCC
           27029]
          Length = 263

 Score =  168 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/215 (26%), Positives = 87/215 (40%), Gaps = 7/215 (3%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           LT  + R +    +  +LGW +F   R+ +    F PR  T      AL           
Sbjct: 42  LTRLVDRRVAGLPLEHLLGWAEFCGRRIAVHPGVFVPRGRT------ALLVDAAAALAGP 95

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDL  G+GA  + L +          DI   A+  A+ N    GV      L    
Sbjct: 96  APVVLDLCCGSGAAAVVLHERLTPRWLAAADIDPVAVACARRNLEPLGVPVYQGDLFDAL 155

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +   G  D++V+N PY+ +  V  L  E R ++  ++LDGG DGL+  R +A G +  L
Sbjct: 156 PAGRRGTLDLVVANAPYVPTAAVASLPAEARLYEAPVALDGGTDGLAVLRRVASGAAEWL 215

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
              G   VE    Q  ++   F +  L      +D
Sbjct: 216 APGGHVVVESSVAQAPELCAAFTAVGLEP-TVVRD 249


>gi|312601124|gb|ADQ90379.1| Protoporphyrinogen oxidase-like protein [Mycoplasma hyopneumoniae
           168]
          Length = 238

 Score =  168 bits (427), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 23/243 (9%)

Query: 28  SVLDDRQRFFLTNAIVRSLK-----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I +           I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQE-- 66

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
                    +   +    +LDL +G+G + LAL K     K    DIS +A+  AK NA 
Sbjct: 67  ----LILKIKKVIKKGDLVLDLCSGSGFIGLALAK-FINAKITLADISDEAILQAKLNAK 121

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +      ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L    +
Sbjct: 122 YNNLELNI--IKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFAWPN 176

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             S Y  I + +   L +DG    EI YN +      F  +        KD  G  R   
Sbjct: 177 PFSFYEKILEKIDNFLAEDGWIFFEIDYNSQD-----FFKKNYPDFIIEKDINGKTRFAY 231

Query: 262 FCR 264
           + +
Sbjct: 232 WQK 234


>gi|54020409|ref|YP_115755.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 232]
 gi|53987582|gb|AAV27783.1| protoporphyrinogen oxidase homolog [Mycoplasma hyopneumoniae 232]
          Length = 238

 Score =  168 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 23/243 (9%)

Query: 28  SVLDDRQRFFLTNAIVRSLK-----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I +           I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQE-- 66

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
                    +   +    +LDL +G+G + LAL K     K    DIS +A+  AK NA 
Sbjct: 67  ----LILKIKKVIKKGDLVLDLCSGSGFIGLALAK-FINAKITLADISDEAILQAKLNAK 121

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +      ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L    +
Sbjct: 122 YNNLELNI--IKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFAWPE 176

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             S Y  I + +   L  DG    EI YN +      F  +        KD  G  R   
Sbjct: 177 PFSFYEKILEKIGNFLADDGWIFFEIDYNSQD-----FFKKNYPDFIIEKDINGKTRFAY 231

Query: 262 FCR 264
           + +
Sbjct: 232 WQK 234


>gi|261749389|ref|YP_003257074.1| putative protoporphyrinogen oxidase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497481|gb|ACX83931.1| putative protoporphyrinogen oxidase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 296

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 108/264 (40%), Gaps = 17/264 (6%)

Query: 9   SFLCRVTGLSSHQVIVD--PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
                V       +I+       ++D     L   +    K+  I  ++G   F+ +   
Sbjct: 30  LLTTHVFKCDKTTIILKLSKKEKIEDYIYKKLIKKLWELKKNRPIQYVIGKTSFFGMDFL 89

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GV 125
           ++   F PRPETE LV   +       +  + V++ DLGTG+G + + L K+ P  +   
Sbjct: 90  VNEKVFIPRPETEELVSWIIQN---HKKNSENVQVFDLGTGSGCIGITLKKKLPKIRHIH 146

Query: 126 GVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIV 180
            VD+S ++L IA  N+  +      ++ D LQ+     +   +  +++VSNPPYI     
Sbjct: 147 AVDLSSESLFIANINSKFHKEKIFFKKVDILQNLISLPILKKYPVNIVVSNPPYIRISEK 206

Query: 181 DCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLC---SVEIGYNQKVDVV 236
             L   +  ++P  +L          Y+ I   + +     G+      EI     +D +
Sbjct: 207 KLLHPNIFQYEPFQALFVPDETPFIFYQKILSWIKKKFT--GVLVCVYFEINQFLHLDFI 264

Query: 237 RIFESRKLFLVNAFKDYGGNDRVL 260
              + +    +   +D+ G  R++
Sbjct: 265 EFMKKKGFRNLEIRRDFQGFFRMI 288


>gi|210634584|ref|ZP_03298180.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279]
 gi|210158769|gb|EEA89740.1| hypothetical protein COLSTE_02102 [Collinsella stercoris DSM 13279]
          Length = 397

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 7/189 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
           V+ A    +   +   V R+L++G GTG + L++  E     + V +DI  +A+++   N
Sbjct: 208 VEVANIEDVLSCQAPTVARVLEVGCGTGCISLSIAAERRDRVRCVAIDIEPRAVDLTIRN 267

Query: 141 AVTNGVSER-FDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
               G+S +  D    +  S ++     G FDV+VSNPPYI + ++  L  EV DF+P +
Sbjct: 268 RDALGISPQAVDVRLGNLVSPLDRETEWGTFDVLVSNPPYIPTSVLTLLPHEVADFEPDL 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L+GG DGL  +R + +     L   GL + E+          +  + ++  V    D  
Sbjct: 328 ALNGGEDGLDIFRRLVNAAPHMLRPGGLLACELYEGHLDQAAALCRAAQMTDVRIVNDLT 387

Query: 255 GNDRVLLFC 263
              R++L  
Sbjct: 388 NRPRMILAR 396



 Score = 99.0 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 40/83 (48%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  VTGLS  ++ +  D  +   +   +  A+VR  K E +  I+G  DF  + + 
Sbjct: 31  AEWLLSGVTGLSRTEIYMSFDKPMSAEELAAMHGAVVRRAKGEPLQYIIGETDFRTITVA 90

Query: 67  LSSDTFEPRPETELLVDSALAFS 89
                  PRPETELLV+  L + 
Sbjct: 91  CEPGVLIPRPETELLVEEVLRYL 113


>gi|71893492|ref|YP_278938.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae J]
 gi|72080479|ref|YP_287537.1| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448]
          Length = 236

 Score =  168 bits (426), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 23/243 (9%)

Query: 28  SVLDDRQRFFLTNAIVRSLK-----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I +           I +I+G+ +   V++ L    F PR ET+   
Sbjct: 7   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQE-- 64

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
                    +   +    +LDL +G+G + LAL K     K    DIS +A+  AK NA 
Sbjct: 65  ----LILKIKKVIKKGDLVLDLCSGSGFIGLALAK-FINAKITLADISDEAILQAKLNAK 119

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +      ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L    +
Sbjct: 120 YNNLELNI--IKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFAWPE 174

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             S Y  I + +   L  DG    EI YN +      F  +        KD  G  R   
Sbjct: 175 PFSFYEKILEKIDNFLADDGWIFFEIDYNSQD-----FFKKNYPDFIIEKDINGKTRFAY 229

Query: 262 FCR 264
           + +
Sbjct: 230 WQK 232


>gi|297196470|ref|ZP_06913868.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153226|gb|EFH32221.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|302607841|emb|CBW45752.1| N-methylase [Streptomyces pristinaespiralis]
          Length = 292

 Score =  168 bits (426), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 7/242 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+         ++   +    D+ L         + + R L  E   RI+G   F  
Sbjct: 29  ARADTRLLAAHACQVAPGDL----DTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
            R  L+   F P+PETE +   A+A     + +      ++DL  G G + + L +  P 
Sbjct: 85  HRFDLAPGVFVPKPETEEITRDAIARLEALVRRGTPAPLVVDLCAGPGTMAVTLARHVPA 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + +G+++S  A   A+ NA   G          D F  + G  D++V+NPPYI  + + 
Sbjct: 145 ARVLGIELSQAAARAARRNARGTGARI-VQGDARDAFPELSGTVDLVVTNPPYIP-IGLR 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               EV + DP ++L  G +GL   R +    +R L   G+  +E G  Q   V  +F +
Sbjct: 203 TSAPEVLEHDPPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262

Query: 242 RK 243
             
Sbjct: 263 TG 264


>gi|225024197|ref|ZP_03713389.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC
           23834]
 gi|224943222|gb|EEG24431.1| hypothetical protein EIKCOROL_01069 [Eikenella corrodens ATCC
           23834]
          Length = 166

 Score =  167 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 2/146 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL TG+G + +      P  +    D+S +ALE+A  N    G+ ER   +QSD F++
Sbjct: 1   MLDLCTGSGCLAIQAACHYPEAQVDAADLSPEALEVAAINVANYGLEERVRLIQSDLFAN 60

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G +D+I+SNPPY+ +  V  L  E    +P ++L  G DGL   R I     R LN  
Sbjct: 61  LSGTYDLIISNPPYVNAESVAALPAEYL-HEPEMALGSGEDGLDATRQILQHAPRFLNPR 119

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL 246
           G+  VEIG+N +  +         F 
Sbjct: 120 GVLLVEIGHN-REALEAALPQLPFFW 144


>gi|229816318|ref|ZP_04446625.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM
           13280]
 gi|229808074|gb|EEP43869.1| hypothetical protein COLINT_03368 [Collinsella intestinalis DSM
           13280]
          Length = 389

 Score =  167 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 7/171 (4%)

Query: 99  VRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSD 156
            R+L++G GTG + L++  E     + V +DI  +A++++  N    G+S    D    +
Sbjct: 216 ARVLEVGCGTGCISLSIASERSGRAQCVAIDIEPRAVDLSIRNRDALGISPADVDVRLGN 275

Query: 157 WFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             S +      G FDV+VSNPPYI S +++ L  EV DF+P ++LDGG DGL  +R + +
Sbjct: 276 LVSPLNRETEWGTFDVLVSNPPYIPSAVMESLPHEVADFEPALALDGGADGLDIFRRLVN 335

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
                L   GL + E+          +  S  +  V    D+ G  R++L 
Sbjct: 336 AAPHMLRPGGLLACELYEGHLDAAADLCRSAGMHDVRIVDDFTGRPRIVLA 386



 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 41/83 (49%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L  VTGLS  ++ V+ D  +   +   +  A+VR  K E +  I+G   F  + + 
Sbjct: 31  AEWLLSGVTGLSRTEIYVNFDKPMSSEELAAMHTAVVRRAKGEPLQYIIGETSFRTIDVM 90

Query: 67  LSSDTFEPRPETELLVDSALAFS 89
                  PRPETELLV+  LA+ 
Sbjct: 91  CEPGVLIPRPETELLVEEVLAYL 113


>gi|144227482|gb|AAZ44227.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae J]
 gi|144575293|gb|AAZ53514.2| protoporphirogen oxidase [Mycoplasma hyopneumoniae 7448]
          Length = 238

 Score =  167 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 23/243 (9%)

Query: 28  SVLDDRQRFFLTNAIVRSLK-----HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
            +L ++QR+ L   I +           I +I+G+ +   V++ L    F PR ET+   
Sbjct: 9   ELLKEKQRYNLPLKISKLENLKLELDYPIQKIIGFIEMEGVKIFLDQKVFIPRYETQE-- 66

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
                    +   +    +LDL +G+G + LAL K     K    DIS +A+  AK NA 
Sbjct: 67  ----LILKIKKVIKKGDLVLDLCSGSGFIGLALAK-FINAKITLADISDEAILQAKLNAK 121

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +      ++SD F+++ E  F++IV+NPPY++    + L   V +F+P+ +L    +
Sbjct: 122 YNNLELNI--IKSDLFANIPEQKFNIIVANPPYLKE---EKLANSVLNFEPKTALFAWPE 176

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             S Y  I + +   L  DG    EI YN +      F  +        KD  G  R   
Sbjct: 177 PFSFYEKILEKIDNFLADDGWIFFEIDYNSQD-----FFKKNYPDFIIEKDINGKTRFAY 231

Query: 262 FCR 264
           + +
Sbjct: 232 WQK 234


>gi|1575339|gb|AAC44869.1| PapM [Streptomyces pristinaespiralis]
          Length = 292

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 7/242 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+         ++   +    D+ L         + + R L  E   RI+G   F  
Sbjct: 29  ARADTRLLAAHACQVAPGDL----DTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMG 84

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPF 121
            R  L+   F P+PETE +   A+A     + +      ++DL  G G + + L +  P 
Sbjct: 85  HRFDLAPGVFVPKPETEEITRDAIARLEALVRRGTTAPLVVDLCAGPGTMAVTLARHVPA 144

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + +G+++S  A   A+ NA   G          D F  + G  D++V+NPPYI  + + 
Sbjct: 145 ARVLGIELSQAAARAARRNARGTGARI-VQGDARDAFPELSGTVDLVVTNPPYIP-IGLR 202

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
               EV + DP ++L  G +GL   R +    +R L   G+  +E G  Q   V  +F +
Sbjct: 203 TSAPEVLEHDPPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRA 262

Query: 242 RK 243
             
Sbjct: 263 TG 264


>gi|222081320|ref|YP_002540683.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
 gi|221725999|gb|ACM29088.1| protoporphyrinogen oxidase (methyltransferase) protein
           [Agrobacterium radiobacter K84]
          Length = 247

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 9/211 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F N+   L  +   PR ETELL            +      ++D+  G G + +A+    
Sbjct: 39  FMNLDFELGPNVLVPRKETELL---GTVCIDRLSQGTVTPIVVDMCCGCGNLGIAIAMNI 95

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPY 174
              +    D++ + +++A  N +  G+ +R   +Q D F +     +EG  D+IV NPPY
Sbjct: 96  ADAQVWSCDLTPETVDVAWRNVIRFGLQDRMSVVQGDMFENIRSIGLEGRVDLIVCNPPY 155

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KV 233
           I +  ++     + + +PR + DGG  G+S  + +       L   G  + E G  Q + 
Sbjct: 156 ISTGRLEADRAHLLENEPREAFDGGPYGISIQQRLIREAFEFLKPGGWLAFEFGEGQERQ 215

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               +  +R    V    D     RV L  +
Sbjct: 216 AAALLARTRAYAPVQFILDASDIPRVALAMK 246


>gi|182413246|ref|YP_001818312.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Opitutus terrae PB90-1]
 gi|177840460|gb|ACB74712.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Opitutus terrae PB90-1]
          Length = 306

 Score =  166 bits (420), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 3/180 (1%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
               +         R  +      PR     L+  AL   LP    R + R +D+ TG+G
Sbjct: 92  PAAYLTREAWLGEHRFYVDERVIIPRSYFLELIPGALRDWLPD-HGRRLKRAVDVCTGSG 150

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVI 168
            + + L  E P      +D+S  AL++A  N   + + +R    QSD F  V    +D+I
Sbjct: 151 CLAILLAHEFPRAVVDAIDVSTPALDVAVINVREHRLGQRVHLFQSDVFDEVPAARYDII 210

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +SNPPY  S  VD    E    +PR++ DGG DGL   R +       L   G+  +E+G
Sbjct: 211 LSNPPYEPSRHVDRQAPEFAA-EPRLAHDGGPDGLMIIRKLLHQAKGRLAPHGIVVIEVG 269


>gi|282861510|ref|ZP_06270574.1| modification methylase, HemK family [Streptomyces sp. ACTE]
 gi|282563326|gb|EFB68864.1| modification methylase, HemK family [Streptomyces sp. ACTE]
          Length = 262

 Score =  165 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 95/263 (36%), Gaps = 44/263 (16%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L   TG                     L   + R +    +  +LGW +F  
Sbjct: 25  AEDEAALLLSAATG------------------PAHLAALVSRRVDGLPLEHVLGWAEFCG 66

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ +    F PR  TE L                   ++DL  G+GA+  AL    P  
Sbjct: 67  IRVAVGPGVFVPRRRTEFL------VRQAVAAAPARPVVVDLCCGSGALGAALATALPAA 120

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178
           +    D+   A+  A+ N    G     +  + D F+ + G      DV+++N PY+ + 
Sbjct: 121 ELHAADVDPAAVRYARRNLAGLG-----EVYEGDLFAPLPGSLRGRVDVLLANVPYVPTH 175

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V+ L  E R  +PR +LDGG DGL   R +A      L   G   VE    Q       
Sbjct: 176 DVELLPAEARVHEPRAALDGGGDGLDVMRRVAAAAPGWLAPGGSLLVETSERQAALAEET 235

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
             +  L             RV++
Sbjct: 236 IGAGGLV-----------PRVVV 247


>gi|330983270|gb|EGH81373.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 187

 Score =  165 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 7/176 (3%)

Query: 27  DSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L+  +   L   I R + +      +LG   F  +   +      PR     L++  
Sbjct: 17  DCRLEVDEISDLQRLIKRRIDERVPTPYLLGEAWFCGLSFIVDDRVLIPRSPIAELIEER 76

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  L      +  RILDL TG+G + +A  +  P  +    D+S  ALE+A  N   +G
Sbjct: 77  FAPWL----ADEPARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHG 132

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           + +R  T+Q D F  + G  FD+IVSNPPY+++     +  E    +P ++L  G 
Sbjct: 133 MEDRVYTVQGDGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEY-QHEPELALACGS 187


>gi|312194811|ref|YP_004014872.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Frankia sp. EuI1c]
 gi|311226147|gb|ADP79002.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Frankia sp. EuI1c]
          Length = 324

 Score =  165 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 62/284 (21%), Positives = 99/284 (34%), Gaps = 27/284 (9%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+      V G+   ++ +     +         + + R      +  + G   F ++ L
Sbjct: 43  DAQLLAAHVLGVPRGRLPLV--REVPADVLDRFWDLVGRRAGRAPLQHLTGEAYFRHLTL 100

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----LDLGTGTGAVCLALLKESPF 121
            +    F PRPETE +V  A+             R     +DL  G+GA+ LAL  E   
Sbjct: 101 AVGPGVFVPRPETEAVVGWAIDTLAAEASSMPAERPGPVCVDLCAGSGAIALALADEVAG 160

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-------------------DWFSSVE 162
            +   V+    AL   + N    G   R                         D  + + 
Sbjct: 161 AEVHAVEADPAALTYLRRNVAATGPPVRVHAADVLGIPTGYGPVGAWAQVPVLDGLAGLV 220

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           G  D +VSNPPY+       +  EV   D P     GG DGL+  R +A   +  L   G
Sbjct: 221 GRVDAVVSNPPYLPDADRAVVEPEVGRHDPPWALWGGGGDGLAGPRAVAAAAAALLRPGG 280

Query: 222 LCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGNDRVLLFCR 264
           L ++E    Q   +  +  +      +   +D  G DR +   R
Sbjct: 281 LFAMEHADGQGAAIRALLAAAGGWSEIATRRDLAGRDRFVTARR 324


>gi|262201324|ref|YP_003272532.1| modification methylase, HemK family [Gordonia bronchialis DSM
           43247]
 gi|262084671|gb|ACY20639.1| modification methylase, HemK family [Gordonia bronchialis DSM
           43247]
          Length = 264

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 84/217 (38%), Gaps = 4/217 (1%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L     R +  E +  ILGW  F  +RL +    F PR  + L+ D+A+A  L     
Sbjct: 41  EQLAAWCARRVAGEPLEHILGWVGFAGLRLAVGPGVFVPRQRSVLVADAAVAHIL---TS 97

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +L+   G   +   +    P       D    AL  A+ N              S
Sbjct: 98  GANPTLLEAFCGVAPIATVVHHRVPGASIHLTDADPVALRYARRNVGD-DAGVYVGPGFS 156

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + + G  DV+ + PPY+     + L  E R+++PR +L  G DGL H R + D  + 
Sbjct: 157 GVPAHLRGYIDVVAAVPPYVPERDFEQLPHEAREYEPRAALIAGPDGLDHVRELIDDAAE 216

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            L+  G+  VE+ + Q         +R L       D
Sbjct: 217 WLSPHGVLVVEMNHAQFDATAEHARARGLRAEVIVGD 253


>gi|330981968|gb|EGH80071.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 189

 Score =  165 bits (418), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 54/162 (33%), Positives = 87/162 (53%), Gaps = 5/162 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  RILDL TG+G + +A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q 
Sbjct: 11  DEPARILDLCTGSGCIGIACAEVFPDAEVALADLSYDALEVANQNIERHGMEDRVYTVQG 70

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F  + G  FD+IVSNPPY+++     +  E    +P ++L  G DGL+  R +    +
Sbjct: 71  DGFDGLPGQRFDLIVSNPPYVDAEDFADMPDEY-QHEPELALACGSDGLNLVRRMLAQAA 129

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            HLN+ GL  VE+G +Q V V  ++       ++  +  GG+
Sbjct: 130 DHLNEKGLLIVEVGNSQ-VHVQALYPEVDFAWLDFQR--GGH 168


>gi|299471450|emb|CBN79402.1| similar to HemK methyltransferase family member 1 isoform 1
           [Ectocarpus siliculosus]
          Length = 332

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 72/308 (23%), Positives = 116/308 (37%), Gaps = 74/308 (24%)

Query: 30  LDDRQRFFLTNA-IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           L            ++R+++H  +  ++G  DFY + L ++  T  PRPETE LV+  L +
Sbjct: 16  LSRTAWTEFRRLCVLRAVQHVPVQYLVGEWDFYGLTLEMAPPTLIPRPETEELVEMILKW 75

Query: 89  SLPRI------------------------EKRDVVRILDLGTGTGAVCLALLKESP-FFK 123
             P +                             +R LD+G+GTGA+ LALL E P   +
Sbjct: 76  LRPDVMNAIAVDRAADAPAAGGDGADSSSSDESGMRFLDVGSGTGALGLALLGELPSGAR 135

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------------------------ 159
            V VD    A+ +++ NA   G+  R+    +                            
Sbjct: 136 CVAVDTQESAVRLSRRNAARTGLQARYSCFHAAVAELAPSEKGSVTTPAIDRPPRSSVEK 195

Query: 160 ------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                  ++G FD +VSNPPYI +  ++ L  +V D +  ++LDGG DGL   R I    
Sbjct: 196 GGREDLDLDGSFDFVVSNPPYIPTRDMEGLPRDVADHEDSVALDGGEDGLDVVRDIVRLC 255

Query: 214 SRHLNKDG------------------LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            R L K G                     +E+G  +     +   +R +      +D   
Sbjct: 256 PRLLRKGGPRQLWMEVDTSHPEAMQRWLGLEVGLGEGAGGSQECRARGVAKFEWMRDMSQ 315

Query: 256 NDRVLLFC 263
             R +   
Sbjct: 316 RPRFVRLT 323


>gi|237785867|ref|YP_002906572.1| methylase of peptide chain release factor [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758779|gb|ACR18029.1| methylase of peptide chain release factor [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 388

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 102/354 (28%), Gaps = 99/354 (27%)

Query: 3   ALRDSHSFLCRVTGL---------SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR 53
              D+   +     +         +   +       +D     F  + I R  + E +  
Sbjct: 27  PRVDAELLMAHALTVKGAPGAEPVTRSSLFFRRQDHVDPDTAEFFESCISRREQREPLQH 86

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-----------RIL 102
           I+G   F  + L +    F PRPETEL+V+ A       ++ R               I+
Sbjct: 87  IMGTVRFAGIDLLVGPGAFVPRPETELIVEWAGKQLRRALDNRSDKDGSSKPVPTDYTIV 146

Query: 103 DLGTGTGAVCLALLKE---------------------------SPFFKGVGVDISCKALE 135
           DL TG G + L +                               P    VGVD S  AL+
Sbjct: 147 DLCTGPGTLALGVAHAAGNALLSLHRDFREQKAVNPHVGSVGRLPRICIVGVDTSDVALD 206

Query: 136 IAKSNAVTNGVSERFDTLQSDWFS-------------------------SVEGL------ 164
            A+ N      + R + L +                              + G       
Sbjct: 207 YARRNVEAFMQNWRAEALDAGLSEDDVDQLSVSLCAGDVTDPTIVKSIRDLCGRDMCDRE 266

Query: 165 ------------------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                              D++VSNPPY+       +  EV   DP  ++  G DG+S  
Sbjct: 267 RCDSDNPEPTRETTPELEVDIVVSNPPYVPENT--AISPEVAA-DPHDAVFAGADGMSVI 323

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
             +   V        + +VE          +         V   KD  G DR +
Sbjct: 324 VPMMAVVEDLSGPGTVVAVEHDELNGPVTSQCLNDHGFTDVEIHKDLAGRDRFV 377


>gi|71748306|ref|XP_823208.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832876|gb|EAN78380.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 420

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 45/271 (16%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +  S     PRPETE+     +   L
Sbjct: 143 DVARRAVKKAVLQRVDLHKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWL 202

Query: 91  PRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
            +I +    +R+LD+  GTG V +A+ K  P  +   VDI  +A+  ++ NA  NG+   
Sbjct: 203 SKIPETTQPLRVLDMCCGTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEAS 262

Query: 149 RFDTLQSDWFSSV--------------------------EGLFDVIVSNPPYIESVIVDC 182
           RF TL+SD F S                            G FD+IVSNPPY+       
Sbjct: 263 RFCTLKSDMFESFLVSNSGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYVLPDQYTD 322

Query: 183 LGLEVRDFDPRISLDGGIDG----LSHYRTIADGVSRHLNKDGL----------CSVEIG 228
           L   ++ ++ +++L G          +++ +++  S  L    +            +E+G
Sbjct: 323 LPPGIKLWESKLALVGDEKREQQQYLYFQELSEFGSLLLKPKAMRNPALCAAPNIVIEVG 382

Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
             Q   V  + E  KL+  V    DY    R
Sbjct: 383 -LQAEQVASVMEKSKLWENVEIHLDYAQQMR 412


>gi|268601733|ref|ZP_06135900.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID18]
 gi|268585864|gb|EEZ50540.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Neisseria gonorrhoeae PID18]
          Length = 243

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 6/208 (2%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L    +    D+ L + ++  +   I R   +H     +      
Sbjct: 40  NAHDEAVYLILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQ 99

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
                 +      PR     L+   L    P IE  ++V   LDL TG+G + + +    
Sbjct: 100 GEFDFYVDERVIVPRSFIYELLGDGL---RPWIEYDELVHNALDLCTGSGCLAIQMAHHY 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD+S  ALE+A  N    G+ ER   + +D F  +EG +D+IVSNPPY+++  
Sbjct: 157 PDAQIDAVDVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAES 216

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           V  L  E    +P ++L  G DGL   R
Sbjct: 217 VGALPEEYL-HEPELALGSGADGLDVTR 243


>gi|261333113|emb|CBH16108.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 420

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 45/271 (16%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +  S     PRPETE+     +   L
Sbjct: 143 DVARRAVKKAVLQRVDLHKPLAYIIGHQPFYGCDIRCSPPLLCPRPETEMWTHWLVRTWL 202

Query: 91  PRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
            +I +    +R+LD+  GTG V +A+ K  P  +   VDI  +A+  ++ NA  NG+   
Sbjct: 203 SKIPETTQPLRVLDMCCGTGCVGIAIAKHVPSAQVTAVDILDEAIGASEENAKLNGLEAS 262

Query: 149 RFDTLQSDWFSSV--------------------------EGLFDVIVSNPPYIESVIVDC 182
           RF TL+SD F S                            G FD+IVSNPPY+       
Sbjct: 263 RFCTLKSDMFESFLVSNSGSLTGEDTKLDLKKKEPAAEHAGSFDIIVSNPPYVLPDQYTD 322

Query: 183 LGLEVRDFDPRISLDGGIDG----LSHYRTIADGVSRHLNKDGL----------CSVEIG 228
           L   ++ ++ +++L G          +++ +++  S  L    +            +E+G
Sbjct: 323 LPPGIKLWESKLALVGDEKREQQQYLYFQELSEFGSLLLKPKAMRNPALCAAPNIVIEVG 382

Query: 229 YNQKVDVVRIFESRKLF-LVNAFKDYGGNDR 258
             Q   V  + E  KL+  V    DY    R
Sbjct: 383 -LQAEQVASVMEKSKLWENVEIHLDYAQQMR 412


>gi|167972247|ref|ZP_02554524.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|167974272|ref|ZP_02556549.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|167988936|ref|ZP_02570607.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|225551341|ref|ZP_03772287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|184209290|gb|EDU06333.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 5
           str. ATCC 27817]
 gi|188018695|gb|EDU56735.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 7
           str. ATCC 27819]
 gi|188998170|gb|EDU67267.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 11
           str. ATCC 33695]
 gi|225379156|gb|EEH01521.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
          Length = 290

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 9/240 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            ++D          +   +  + + RILG+  F   R  +  + F  R ETELLVD    
Sbjct: 47  KLVDLSLECKYFELLNEFINEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVDVINK 106

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                  K  +  ++D+  G+G + L++           +DIS  A+  +K NA  + + 
Sbjct: 107 IIKQ--SKHQIKSVIDVCCGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIE 164

Query: 148 ERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGL 203
                 +S   +F   +  FD+I+ NPPYI+S     L  +V D+DP  +L      DG+
Sbjct: 165 GINYLHKSMQKYFLHTKKRFDLIICNPPYIKSDY--QLDKQVLDYDPLNALVDFEHKDGI 222

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262
           S Y  I + +S   NK      EIGY+QK  +  + +  +         DY    R+L+ 
Sbjct: 223 SFYLFIINNISLICNKKFTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILVI 282


>gi|19115895|ref|NP_594983.1| mitochondrial S-adenosylmethionine-dependent methyltransferase
           (possibly N(5)-glutamine) [Schizosaccharomyces pombe
           972h-]
 gi|74581943|sp|O14028|MTQ1_SCHPO RecName: Full=Probable mitochondrial N(5)-glutamine
           methyltransferase mtq1
 gi|2408047|emb|CAB16250.1| mitochondrial S-adenosylmethionine-dependent methyltransferase
           (possibly N(5)-glutamine) [Schizosaccharomyces pombe]
          Length = 309

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/249 (25%), Positives = 105/249 (42%), Gaps = 21/249 (8%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  + NA     ++  +  IL  + F N+++        PR ETE  V+  +   L R+E
Sbjct: 55  RKKIVNACQLRARNYPLQYILKSQPFGNIKIDCQQGVLIPRWETEEWVERVVDK-LNRLE 113

Query: 95  KRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSN---AVTNGVSERF 150
           +   ++ILDL TG+G +    L           VD+S KAL++A  N   A+ +G   + 
Sbjct: 114 RLKPLKILDLCTGSGCISSFVLANLRVPHTIEAVDVSKKALKLAVKNCDRAIAHGTVGKI 173

Query: 151 DTLQSDWFSSVE------GLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGL 203
           +  Q D  +  E          V++ NPPYI          + VR ++P+++L     G 
Sbjct: 174 NFHQIDVLNEHERVESLLQTSHVLLCNPPYISDDDFAAQTDISVRKYEPKLALLAKNGGN 233

Query: 204 SHYRTIADGVSRHLNKDG-------LCSVEIGYN-QKVDVVRIFESRKLFLVNAFKDYGG 255
             Y   +  + R L ++        L   EIG   Q   V  +F+       N  +D   
Sbjct: 234 EFYYKFSQYIKRMLQRNAKDFVPLSLIVFEIGSTHQAKIVKSLFDDTNW-QANIEQDGAH 292

Query: 256 NDRVLLFCR 264
            DRV++  R
Sbjct: 293 QDRVVIITR 301


>gi|322503822|emb|CBZ38908.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 514

 Score =  162 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 70/316 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  + H       G +  +   +     ++ +R    + + R   H+ +  I+G + F+
Sbjct: 202 QASLEVHWVEEWAAGRARAERWSE-----EEARRQVKRSLLERVDLHKPLSYIIGSQPFF 256

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------DVVRILDLGTGTGAV 111
              +   +    PRPETE+     +   L R E+R            +RILD+  GTG +
Sbjct: 257 GCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVSPIRILDVCCGTGCI 316

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS----------- 159
            +AL K  P      +DI  +A+ +++ NA+ NG+S  R+  ++SD FS           
Sbjct: 317 GVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESDMFSCFLEGQVSGQP 376

Query: 160 -----------------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                            +  G +DVIVSNPPY+       L   +  ++ + +L G    
Sbjct: 377 GDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYVLPEQYVGLPCTITHWESKTALVG---- 432

Query: 203 LSHYR---------TIADGVSRHLNKDGL----------CSVEIGYNQKVDVVRIFESRK 243
              YR          +    ++ L                ++E+G  Q   V  + E  K
Sbjct: 433 -DDYRESRQYLYFKELCVHGAKLLKPRARRNDMLRDAPNIAIEVG-LQAHMVADLMEKSK 490

Query: 244 LF-LVNAFKDYGGNDR 258
           L+  V    DY   +R
Sbjct: 491 LWRDVEVHLDYAQQER 506


>gi|146104511|ref|XP_001469847.1| hypothetical protein [Leishmania infantum]
 gi|134074217|emb|CAM72959.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 514

 Score =  162 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 70/316 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  + H       G +  +   +     ++ +R    + + R   H+ +  I+G + F+
Sbjct: 202 QASLEVHWVEEWAAGRARAERWSE-----EEARRQVKRSLLERVDLHKPLSYIIGSQPFF 256

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------DVVRILDLGTGTGAV 111
              +   +    PRPETE+     +   L R E+R            +RILD+  GTG +
Sbjct: 257 GCDIHCEAPLLCPRPETEMWTHWMVYKHLARAERRTFTTGFSPAVSPIRILDVCCGTGCI 316

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS----------- 159
            +AL K  P      +DI  +A+ +++ NA+ NG+S  R+  ++SD FS           
Sbjct: 317 GVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPARYSAMESDMFSCFLEGQVSGQP 376

Query: 160 -----------------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                            +  G +DVIVSNPPY+       L   +  ++ + +L G    
Sbjct: 377 GDSADLSEDRPFGTVKDAYAGTYDVIVSNPPYVLPEQYVGLPCTITHWESKTALVG---- 432

Query: 203 LSHYR---------TIADGVSRHLNKDGL----------CSVEIGYNQKVDVVRIFESRK 243
              YR          +    ++ L                ++E+G  Q   V  + E  K
Sbjct: 433 -DDYRESRQYLYFKELCVHGAKLLKPRARRNDMLRDAPNIAIEVG-LQAHMVADLMEKSK 490

Query: 244 LF-LVNAFKDYGGNDR 258
           L+  V    DY   +R
Sbjct: 491 LWRDVEVHLDYAQQER 506


>gi|119503187|ref|ZP_01625271.1| modification methylase, HemK family protein [marine gamma
           proteobacterium HTCC2080]
 gi|119460833|gb|EAW41924.1| modification methylase, HemK family protein [marine gamma
           proteobacterium HTCC2080]
          Length = 314

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 99/249 (39%), Gaps = 8/249 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDF 60
            A  ++ + +    GL         D V+ D     L   + + +        I+G+   
Sbjct: 42  DAHDEAVALVLAAEGLDPTTGPEILDVVMSDAGEKKLQLFLQQRIHDRLPTAYIIGYAAL 101

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     S    PR     ++    +   P   +   +RI+D+  G G++ L     SP
Sbjct: 102 GELTFWCDSRALVPRSPLMSVIHEGYS---PWFNQATPLRIVDVCCGGGSLGLLAAYHSP 158

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
               + +DI   AL +A +N    G+      +Q+D   ++     D+I++NPPY+++  
Sbjct: 159 ESHVLLLDIDADALALAGTNRRDQGMGNTL-CVQADLLEALAPSSVDIILANPPYVDAED 217

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +  L  E    +PR++L  G DGL     +    S  L+  G+  +E+G N    +   +
Sbjct: 218 MANLPQEY-HHEPRLALAAGDDGLDLVHRLLRQASLVLSPHGMLFLEVG-NSAPALASSY 275

Query: 240 ESRKLFLVN 248
            +     + 
Sbjct: 276 PALTFIWLE 284


>gi|307111109|gb|EFN59344.1| hypothetical protein CHLNCDRAFT_137784 [Chlorella variabilis]
          Length = 386

 Score =  162 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 61/271 (22%), Positives = 97/271 (35%), Gaps = 43/271 (15%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           +  L +           R  +   +  +     + ++ L++      PRPETEL++D   
Sbjct: 115 ERDLKEAAGVAEAVWEQRLQQRIPLQYLTATAFWRDIVLSVGPGVLIPRPETELVIDFV- 173

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNG 145
             ++    +       DLGTG+GA+ + + +  P  +    VD+S   L  A  NA   G
Sbjct: 174 QEAVAAAPELARGAWADLGTGSGALAVGVARALPQAQQVYAVDLSPVPLSYAAFNARRLG 233

Query: 146 VSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                      WF  +E         +VSNPPYI S  +  L  EV   +P ++L GG  
Sbjct: 234 ---------GSWFEPLEAAGMPQLAGVVSNPPYIRSTDMPSLQAEVGRHEPHLALHGGEG 284

Query: 202 -GLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIF-------------------- 239
            G+     I  G +R L   G  ++E  G  Q   +  +                     
Sbjct: 285 LGIDCLLPICMGAARRLQPGGFLALETAGGEQAHYIADLLSHMRRSALGGCGPADGITGG 344

Query: 240 ------ESRKLFLVNAFKDYGGNDRVLLFCR 264
                 E      V   +D  G DR +   R
Sbjct: 345 SGVPGREQLAFEDVRVRRDLRGVDRFVTASR 375


>gi|167975332|ref|ZP_02557609.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|168362409|ref|ZP_02695588.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|195867397|ref|ZP_03079401.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198273462|ref|ZP_03205998.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225550717|ref|ZP_03771666.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|171903368|gb|EDT49657.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 13
           str. ATCC 33698]
 gi|195659907|gb|EDX53287.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 12
           str. ATCC 33696]
 gi|195660873|gb|EDX54126.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 9
           str. ATCC 33175]
 gi|198249982|gb|EDY74762.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 4
           str. ATCC 27816]
 gi|225379871|gb|EEH02233.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 290

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 9/240 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            ++D          +   +  + + RILG+  F   R  +  + F  R ETELLVD    
Sbjct: 47  KLVDLSLECKYFELLNEFINEKPLERILGYGYFCGRRFYVDENVFAFRVETELLVDVINK 106

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                     +  ++D+  G+G + L++           +DIS  A+  +K NA  + + 
Sbjct: 107 IIKQ--STHQIKSVIDVCCGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIE 164

Query: 148 ERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGL 203
                 +S   +F   +  FD+I+ NPPYI+S     L  +V D+DP  +L      DG+
Sbjct: 165 GINYLHKSMQKYFLHTKKRFDLIICNPPYIKSDY--QLDKQVLDYDPLNALVDFEHKDGI 222

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262
           S Y  I + +S   NK      EIGY+QK  +  + +  +         DY    R+L+ 
Sbjct: 223 SFYLFIINNISLICNKKFTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILVI 282


>gi|229197607|ref|ZP_04324330.1| Modification methylase, HemK [Bacillus cereus m1293]
 gi|228585871|gb|EEK43966.1| Modification methylase, HemK [Bacillus cereus m1293]
          Length = 220

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 56/212 (26%), Positives = 85/212 (40%), Gaps = 7/212 (3%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
            +        +  ++G+  F  +R+ +    F PR  TE LV  A A S           
Sbjct: 1   MVEMRADGLPLEYVVGYAKFCGLRIEVDRGVFVPRQRTEFLVHQAEALSCF------GDI 54

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DL  G+GAV  AL       +   VDI   A+  A  N  + G       L      S
Sbjct: 55  VVDLCCGSGAVGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHS 114

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           ++G    I++N PY+ +  +  L  E R ++P+++LDGG DGL   R +A      L   
Sbjct: 115 LKGNVKTILANAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           G   +E    Q      IF    L      +D
Sbjct: 175 GHLLIETSEMQANQTFEIFAGAGLTT-KVARD 205


>gi|13358170|ref|NP_078454.1| hypothetical protein UU004m [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|167971168|ref|ZP_02553445.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
 gi|168282012|ref|ZP_02689679.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|170761878|ref|YP_001752084.1| HemK family methyltransferase [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|168827455|gb|ACA32717.1| methyltransferase, HemK family [Ureaplasma parvum serovar 3 str.
           ATCC 27815]
 gi|182676092|gb|EDT87997.1| methyltransferase, HemK family [Ureaplasma parvum serovar 14 str.
           ATCC 33697]
 gi|186700877|gb|EDU19159.1| methyltransferase, HemK family [Ureaplasma parvum serovar 6 str.
           ATCC 27818]
          Length = 290

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 11/234 (4%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
            +     +   +  + + RILG+  F   R  +  + F  R ETELL+D           
Sbjct: 54  EYTYFKLLDEFINGKPLVRILGYGYFCAKRFYVDKNVFAFRVETELLIDVVNKVIQQ--S 111

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              +  ++D+  G+G + L+            +DIS  A+   K NA  + +++  + + 
Sbjct: 112 TYKIKNVIDVCCGSGVLGLSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLTD-VNFIH 170

Query: 155 ---SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGIDGLSHYRTI 209
               ++F + +  FD+I+ NPPYI+S     L  EV D+DP  +L      DG+S Y  I
Sbjct: 171 KSMQEYFLNTKKRFDLIICNPPYIKSNY--ELNREVLDYDPINALIDFDHKDGISFYLFI 228

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262
            + +    N+      EIG++QK  + ++ +  +  L      DY    R+L+ 
Sbjct: 229 INNIKSIANEKFTIIFEIGFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILII 282


>gi|168308159|ref|ZP_02690834.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
 gi|171902800|gb|EDT49089.1| methyltransferase, HemK family [Ureaplasma parvum serovar 1 str.
           ATCC 27813]
          Length = 290

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 11/234 (4%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
            +     +   +  + + RILG+  F   R  +  + F  R ETELL+D           
Sbjct: 54  EYTYFKLLDEFINGKPLVRILGYGYFCAKRFYVDKNVFAFRVETELLIDVVNKVIQQ--S 111

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              +  ++D+  G+G + L+            +DIS  A+   K NA  + ++   + + 
Sbjct: 112 TYKIKNVIDVCCGSGVLGLSTKMNFNQLNVSLLDISIDAINNCKKNAKYHNLT-NVNFIH 170

Query: 155 ---SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL--DGGIDGLSHYRTI 209
               ++F + +  FD+I+ NPPYI+S     L  EV D+DP  +L      DG+S Y  I
Sbjct: 171 KSMQEYFLNTKKRFDLIICNPPYIKSNY--ELNREVLDYDPINALIDFDHKDGISFYLFI 228

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLF 262
            + +    N+      EIG++QK  + ++ +  +  L      DY    R+L+ 
Sbjct: 229 INNIKSIANEKFTIIFEIGFDQKEILEKVIKKNEFPLFYYFINDYNNLCRILII 282


>gi|209554022|ref|YP_002284417.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
 gi|209541523|gb|ACI59752.1| methyltransferase, HemK family [Ureaplasma urealyticum serovar 10
           str. ATCC 33699]
          Length = 290

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 9/240 (3%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
            ++D          +   +  + + RILG+  F   R  +  + F  R ETELLVD    
Sbjct: 47  KLVDLSLECKYFELLNEFINEKPLERILGYGYFCGRRFCVDENVFAFRVETELLVDVINK 106

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                     +  ++D+  G+G + L++           +DIS  A+  +K NA  + + 
Sbjct: 107 IIKQ--STHQIKSVIDVCCGSGVLGLSVKMNFNNLDVSLLDISLDAISNSKKNAQYHNIE 164

Query: 148 ERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI--DGL 203
                 +S   +F   +  FD+I+ NPPYI+S     L  +V D+DP  +L      DG+
Sbjct: 165 GINYLHKSMQKYFLHTKKRFDLIICNPPYIKSDY--QLDKQVLDYDPLNALVDFENKDGI 222

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKDYGGNDRVLLF 262
           S Y  I + +S   NK      EIGY+QK  +  + +  +         DY    R+L+ 
Sbjct: 223 SFYLFIINNISLICNKKFTIVFEIGYDQKTILENVLKKNEFPIFYYFINDYNNLYRILVI 282


>gi|157877432|ref|XP_001687033.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68130108|emb|CAJ09416.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 514

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 70/316 (22%), Positives = 120/316 (37%), Gaps = 70/316 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  + H       G +  +   +     D+ +R    + + R   H+ +  I+G + F+
Sbjct: 202 QASLEVHWVEEWAAGRARAERWSE-----DEARRQVKRSLLERVDLHKPLSYIIGSQPFF 256

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------DVVRILDLGTGTGAV 111
              +   +    PRPETE+     +   L R E+             +RILD+  GTG +
Sbjct: 257 GCDIHCEAPLLCPRPETEMWTHWMVYRHLARAERSTPATGFSPAVSPIRILDVCCGTGCI 316

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF------------ 158
            +AL K  P      +DI  +A+ +++ NA+ NG+S ER+   +SD F            
Sbjct: 317 GVALAKHLPSAVVTALDILPEAVRVSRENAMRNGISPERYSARESDMFGCFLEGRVSGPP 376

Query: 159 ----------------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                            +  G +DVIVSNPPY+       L   +  ++ + +L G    
Sbjct: 377 GKSANLSEDRPLGTVKDAYAGTYDVIVSNPPYVLPQQYVDLPCTITHWESKTALVG---- 432

Query: 203 LSHYR---------TIADGVSRHLNKDGL----------CSVEIGYNQKVDVVRIFESRK 243
              YR          +    ++ L                ++E+G  Q   V  + +  K
Sbjct: 433 -DDYRESRQYLYFKELCVHGAKLLKPRARRNDMLRDAPNIAIEVG-LQAHMVADLMDESK 490

Query: 244 LF-LVNAFKDYGGNDR 258
           L+  V    DY   +R
Sbjct: 491 LWRDVEVHLDYAQQER 506


>gi|315926839|gb|EFV06213.1| methyltransferase small domain protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 222

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 12/206 (5%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           ++   LC         + ++ D  +D          I R    E    I    DF+ +  
Sbjct: 20  EAVFILCEYLKKDKAWLFLNQDIKIDHE---PYFELIKRFKSGEPFEYIFEKVDFWGLEF 76

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR ++E+L    L   L   +K     IL++G G+G + + L KE    K  
Sbjct: 77  KIKKGILIPRYDSEIL----LFQILNLCKKNTFNGILEIGFGSGILSIVLAKEL-GLKIT 131

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI+ KALE+A  NA  + V    D    + F  ++  +D I SNPPYI++     + +
Sbjct: 132 ACDINPKALELALENAQLHKVDHLIDFKLCN-FKQIKENYDFIFSNPPYIKNSYP--IDI 188

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIAD 211
            V+  +P+ +L GG  G      I  
Sbjct: 189 WVQK-EPKEALFGGEKGYEILEEIIH 213


>gi|300933613|ref|ZP_07148869.1| methylase of peptide chain release factors [Corynebacterium
           resistens DSM 45100]
          Length = 330

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/308 (22%), Positives = 106/308 (34%), Gaps = 57/308 (18%)

Query: 3   ALRDSHSFLCRVTGLSSHQV--IVDPDSVLDDRQRFF---------LTNAIVRSLKHESI 51
            L DS   +    G +      +  P   +   + FF           + I +  +    
Sbjct: 30  PLVDSRLLMAYALGAAPSARTSVEVPRIPVSTTEVFFNHDHSTPGVFADWIRQRTQRIPA 89

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-----------KRDVVR 100
             I+G   F  V        F PRPETELLVD A   +L R +               + 
Sbjct: 90  QHIVGAAVFDGVDFLCRPGGFIPRPETELLVDWAFHEALRRAKIHRDEATNSDDSSHCIS 149

Query: 101 ILDLGTGTGAVCLALLKESPFFK----GVGVDISCKALEIAKSNAVTNGV------SERF 150
           ++DL TG G++ LAL             +G+++   AL +A+ N            +   
Sbjct: 150 VVDLCTGPGSIALALACRFSDATQNALIIGIELHEVALHLARDNEAQLRHRGLISDNVEV 209

Query: 151 DTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
             L+ D           +    DVIVSNPPY+ +     +G EV   DP  ++  G DG+
Sbjct: 210 RFLRCDLLDVEEVRKLPMGASPDVIVSNPPYVPTS--APVGAEVL-HDPSDAVFAGSDGM 266

Query: 204 SHYRTIADGVSRHLNKDGLCS--------VEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
                        L   G+ +        +E         VR  E     +V   +D  G
Sbjct: 267 DFL-------PGLLGALGIIAGGEEVGVGIEHDDANGAATVRALEEAGARVVEQHQDVAG 319

Query: 256 NDRVLLFC 263
            DR +   
Sbjct: 320 RDRFVTGT 327


>gi|229157069|ref|ZP_04285150.1| Modification methylase, HemK [Bacillus cereus ATCC 4342]
 gi|228626559|gb|EEK83305.1| Modification methylase, HemK [Bacillus cereus ATCC 4342]
          Length = 260

 Score =  160 bits (406), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 57/217 (26%), Positives = 86/217 (39%), Gaps = 7/217 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L   +        +  ++G+  F  +R+ +    F PR  TE LV  A A S      
Sbjct: 36  EDLKRMVEMRADGLPLEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSCF---- 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G+GAV  AL       +   VDI   A+  A  N  + G       L  
Sbjct: 92  --GDIVVDLCCGSGAVGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYK 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               S++G    I++N PY+ +  +  L  E R  +P+++LDGG DGL   R +A     
Sbjct: 150 SLPHSLKGNVKTILANAPYVPTDAIKLLPQEARLHEPKVALDGGEDGLDIQRRVAKEAFL 209

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            L   G   +E    Q      IF   +L      +D
Sbjct: 210 WLAPGGHLLIETSEMQADQTFEIFAGAELTT-KVARD 245


>gi|154346308|ref|XP_001569091.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134066433|emb|CAM44225.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 497

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 120/316 (37%), Gaps = 70/316 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  + H     V   S  +V    +   D+ +R    + + R   H+ +  I+G + F+
Sbjct: 185 QASLEVHWVEEWVA--SRARVERWSE---DEARRQVKRSLLERIDLHKPLSYIIGSQPFF 239

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------DVVRILDLGTGTGAV 111
              +   +    PRPETE+     +   L R E+             +RILD+  GTG +
Sbjct: 240 GCDIHCEAPLLCPRPETEMWTHWMVYNHLARAERSTTATNVSSAASPIRILDVCCGTGCI 299

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV--------- 161
            +AL K         +DI  +A+ +++ NA  NG+  ER+  ++SD FS           
Sbjct: 300 GVALAKHLSTATVTALDILSEAVRVSRENAARNGIPPERYSAMESDMFSCFLDEQASALP 359

Query: 162 -------------------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                               G +DVIVSNPPY+       L   +  ++ + +L G    
Sbjct: 360 GERANLSDDRPMGTVKDTYAGTYDVIVSNPPYVLPKQYTDLPCTITHWESKTALVG---- 415

Query: 203 LSHYR---------TIADGVSRHLNK----DGLC------SVEIGYNQKVDVVRIFESRK 243
              YR          +    ++ L      + +        +E+G  Q   V  + E  K
Sbjct: 416 -DDYRESRQYLYFKELCVHGAKLLKPRDQRNAILRDAPNIVIEVG-LQAHMVAELMEKSK 473

Query: 244 LF-LVNAFKDYGGNDR 258
           L+  V    DY   +R
Sbjct: 474 LWQDVEVHLDYAQQER 489


>gi|312796230|ref|YP_004029152.1| ribosomal protein L3P methyltransferase [Burkholderia rhizoxinica
           HKI 454]
 gi|312168005|emb|CBW75008.1| Ribosomal protein L3P methyltransferase (EC 2.1.1.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 196

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 10/194 (5%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             PR     L+   L    P I+  D +  +L+L TG+G + +      P  +   VD+S
Sbjct: 2   IVPRSLIGELL---LERLSPWIDAPDELGAVLELCTGSGCLAIMAADAFPGAEIDAVDLS 58

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
             AL++A+ N     ++ER    + D F  +    +D+I++NPPY+    +  L  E R 
Sbjct: 59  AHALQVAQRNVDDYDLNERVTLFEGDLFEPLPQRQYDLILANPPYVNEASMQALPAEYR- 117

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +P ++L GG DG+   R I       L  DG+  +EIG N++  V   F    L  +  
Sbjct: 118 HEPAMALAGGSDGMDIVRRIIGAARDWLTDDGVLVIEIG-NERPHVEAAFGGLPLTWLPT 176

Query: 250 FKDYGGNDRVLLFC 263
                G+D V L  
Sbjct: 177 H---AGDDSVFLLR 187


>gi|322491043|emb|CBZ26307.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 514

 Score =  159 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 72/316 (22%), Positives = 121/316 (38%), Gaps = 70/316 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           QA  + H     V G +  +         D+ +R    + + R   H+ +  I+G + F+
Sbjct: 202 QASLEVHWVEEWVAGRARAERWSH-----DEARRQVKRSLLERVDLHKPLSYIIGSQPFF 256

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------DVVRILDLGTGTGAV 111
              +   +    PRPETE+     +   L R E+             +RILD+  GTG +
Sbjct: 257 GCDIHCEAPLLCPRPETEMWTHWMVYSYLARAERSITATDLSPAVSPMRILDVCCGTGCI 316

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFS----------- 159
            +AL K         +DI  +A+ +++ NA+ NG+S ER+  ++SD FS           
Sbjct: 317 GVALAKHLSSAVVTALDILPEAVRVSRENAMRNGISPERYTAMESDMFSCFLEEPVPAQQ 376

Query: 160 -----------------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                            +  G +DVIVSNPPY+       L   +  ++ + +L G    
Sbjct: 377 GDSAHLSEDRPLGTVNDAYAGTYDVIVSNPPYVLPEQYVDLPCTITHWESKTALVG---- 432

Query: 203 LSHYR---------TIADGVSRHLNKDGL----------CSVEIGYNQKVDVVRIFESRK 243
              YR          +    ++ L                ++E+G  Q   V  + E  K
Sbjct: 433 -DDYRESRQYLYFKELCVHGAKLLKPRARRNEMLRDAPNIAIEVG-LQAHMVADLMEKSK 490

Query: 244 LF-LVNAFKDYGGNDR 258
           L+  V    DY   +R
Sbjct: 491 LWRDVEVHLDYAHQER 506


>gi|300928502|ref|ZP_07144028.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 187-1]
 gi|300463497|gb|EFK26990.1| protein-(glutamine-N5) methyltransferase, ribosomal protein
           L3-specific [Escherichia coli MS 187-1]
          Length = 172

 Score =  159 bits (404), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 6/162 (3%)

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           + TG+G + +A     P  +   VDIS  AL +A+ N   +G+      ++SD F  +  
Sbjct: 1   MCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPK 60

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +D+IV+NPPY+++  +  L  E R  +P + L  G DGL   R I    + +L  DG+
Sbjct: 61  VQYDLIVTNPPYVDAEDMSDLPNEYR-HEPELGLASGTDGLKLTRRILGNAADYLADDGV 119

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
              E+G N  V ++  +       +    D  G D V +  +
Sbjct: 120 LICEVG-NSMVHLMEQYPDVPFTWLEF--D-NGGDGVFMLTK 157


>gi|226323867|ref|ZP_03799385.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758]
 gi|225207416|gb|EEG89770.1| hypothetical protein COPCOM_01642 [Coprococcus comes ATCC 27758]
          Length = 128

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 65/110 (59%)

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             +Q+D F ++ G FD+I SNPPYI + +++ L  EVR  DP  +LDG  DGL  YR +A
Sbjct: 10  KWIQTDMFENITGTFDMITSNPPYIPTKVIEELEAEVRLHDPYEALDGKEDGLYFYRILA 69

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
           + V  +L   G   +EIGY+Q  DV ++ +      V+  KD  G DRV+
Sbjct: 70  EKVPEYLTDGGWLVMEIGYDQSADVEKLLKETGFEQVSTQKDLAGLDRVV 119


>gi|148260024|ref|YP_001234151.1| HemK family modification methylase [Acidiphilium cryptum JF-5]
 gi|146401705|gb|ABQ30232.1| modification methylase, HemK family [Acidiphilium cryptum JF-5]
          Length = 280

 Score =  159 bits (402), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R++   L    G+    +       LD+           R    E +  I G + F+
Sbjct: 22  NPTREARLILAHALGVDLAALWA-----LDEVDPEPAFALARRRAAREPLAYITGAKGFW 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +S  T  PRP+TE L+++AL     R ++R +  ILDLGTGTGA+ LA L E P 
Sbjct: 77  SLDLAVSPATLIPRPDTETLIEAALRH---RPDRRKIRTILDLGTGTGALLLAALAEYPD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D    A  +A++NA   G++ R      DW  ++   FD+I++NPPYI S  + 
Sbjct: 134 AFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPPYIPSADIP 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   +P  +LDGG DG   YR I   + R L   GL  +E G  Q   +  +  +
Sbjct: 194 GLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQAAPLAAL-AA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                  A  D  G  R ++  
Sbjct: 253 AHGLDATAEPDLAGIPRAVIMA 274


>gi|326403020|ref|YP_004283101.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301]
 gi|325049881|dbj|BAJ80219.1| protein methyltransferase HemK [Acidiphilium multivorum AIU301]
          Length = 280

 Score =  158 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 9/262 (3%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
              R++   L    G+    +       LD+           R    E +  I G + F+
Sbjct: 22  NPTREARLILAHALGVDLAALWA-----LDEVDPEPAFALARRRAAREPLAYITGAKGFW 76

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L +S  T  PRP+TE L+++AL     R ++R +  ILDLGTGTGA+ LA L E P 
Sbjct: 77  SLDLAVSPATLIPRPDTETLIEAALRH---RPDRRTIRTILDLGTGTGALLLAALAEYPD 133

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             G+G+D    A  +A++NA   G++ R      DW  ++   FD+I++NPPYI S  + 
Sbjct: 134 AFGIGIDRVPAACALARANAARTGLAARAAFCCGDWADALAARFDLILANPPYIPSADIP 193

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  EV   +P  +LDGG DG   YR I   + R L   GL  +E G  Q   +  +  +
Sbjct: 194 GLMAEVAAHEPASALDGGADGFDAYRRIVADLPRLLAPGGLAILEAGIGQAAPLAAL-AA 252

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
                  A  D  G  R ++  
Sbjct: 253 AHGLDATAEPDLAGIPRAVIMA 274


>gi|254572519|ref|XP_002493369.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033167|emb|CAY71190.1| hypothetical protein PAS_chr3_1257 [Pichia pastoris GS115]
 gi|328352616|emb|CCA39014.1| hypothetical protein PP7435_Chr3-0040 [Pichia pastoris CBS 7435]
          Length = 292

 Score =  158 bits (401), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 27/264 (10%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSD 70
           C     +  ++       L   Q      A ++  +H   +  ILG + F +V +     
Sbjct: 22  CNTLQQARRELF-WIQKELPSEQ---WKQACIQRGRHLMPLQYILGNQPFGSVNIKCRPG 77

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PR +TE       +  +      D   +LD+ TG+G + L L  E      +G DIS
Sbjct: 78  VLIPRNDTEEWC----SELVDVFRGSDTFSVLDMCTGSGCIALYLATELSNVTVLGGDIS 133

Query: 131 CKALEIAKSNAVTNG--VSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIV---DCL 183
              + +A  N   N   +  +      D F  + G   FDV+VSNPPYI +  +   + +
Sbjct: 134 QDCISLANENIDVNKDIIKGKIKVDSMDLFQPLAGDKKFDVVVSNPPYIPTHELEKQEEV 193

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSVEIGY-NQKVDVVRIFE 240
              VR ++PR++L+G    L  ++ +      ++      +  +EIG   Q      + +
Sbjct: 194 EKSVRLYEPRLALEGD---LPVFKAMVTY---YIIPSQCKVFILEIGSREQGQYTRSLLD 247

Query: 241 SRKLFLVNAFKDYGGNDRVLLFCR 264
               ++V    D     R ++  R
Sbjct: 248 ES--WVVGLRLDSAFRPRNVIGFR 269


>gi|257068137|ref|YP_003154392.1| putative methylase of HemK family [Brachybacterium faecium DSM
           4810]
 gi|256558955|gb|ACU84802.1| putative methylase of HemK family [Brachybacterium faecium DSM
           4810]
          Length = 270

 Score =  158 bits (401), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 5/191 (2%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
            + R    E +  +LG  + +  +L++    F PR  T LL++     +L     R    
Sbjct: 50  MVRRRTAGEFLEHVLGAVEIFGEKLSVGPGVFVPRQRTALLIE----RTLDACRGRAAPT 105

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+   G   +   + +  P  +   +D    AL  A+ N   +  + R ++L      +
Sbjct: 106 VLEACCGVAPIAALVARRHPSAQVHAMDRDETALRHAQKNLPASARTHRAESLAG-LPPA 164

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  DV+ + PPY+    +  +  E RD +PR +L GG DGL+  R +      +L   
Sbjct: 165 LLGRVDVLAAVPPYVPEGELAHMPREARDHEPRAALLGGPDGLAVVRRLLRDAPPYLAAG 224

Query: 221 GLCSVEIGYNQ 231
           G   +E+  +Q
Sbjct: 225 GELLLEMHRDQ 235


>gi|270668928|ref|ZP_06222563.1| HemK family protein [Haemophilus influenzae HK1212]
 gi|270316634|gb|EFA28442.1| HemK family protein [Haemophilus influenzae HK1212]
          Length = 156

 Score =  157 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 57/151 (37%), Positives = 80/151 (52%), Gaps = 11/151 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF--------KGVGVDISCKALEIAKSNAVTNG 145
           E     RILDLGTGTGA+ LAL  E  F         + +GVD+    + +A+SNA  N 
Sbjct: 8   ENPPHFRILDLGTGTGAIALALASELSFICQKRLISLEIIGVDLMPDVVALAQSNAERNQ 67

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +      LQS WF ++ G FD+IVSNPPYI++        +VR F+P  +L     G + 
Sbjct: 68  L--NVQFLQSRWFDNITGKFDLIVSNPPYIDAQDEHLHQGDVR-FEPLSALVANDAGYAD 124

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            R I +  S +LN +G+  +E G+ Q   V 
Sbjct: 125 LRHIIELASSYLNSNGVLLLEHGWQQGEKVR 155


>gi|322815425|gb|EFZ24082.1| hypothetical protein TCSYLVIO_9800 [Trypanosoma cruzi]
          Length = 420

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 48/274 (17%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +  S     PRPETE+     +   L
Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCSPPLLCPRPETEMWTHWFVQRHL 199

Query: 91  PRI--EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            R   +++ ++R+LD+  GTG V +A+    P  + V VD+  +A+++++ NA  NG+  
Sbjct: 200 SRATTDEKSLLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259

Query: 149 -RFDTLQSDWFSSV----------------------------EGLFDVIVSNPPYIESVI 179
            R+  ++SD F +                              G FD+IVSNPPY+    
Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSRGKSKEGMSENKKAQIADLHVGSFDIIVSNPPYVLPEQ 319

Query: 180 VDCLGLEVRDFDPRISLDGG----IDGLSHYRTIADGVSRHLNK----DGLC------SV 225
              L   ++ ++ +I+L G          +++ + +  S  L      +          V
Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENHQYLYFQELCEMGSVMLKPKVRRNATLASAPNFIV 379

Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258
           E+G  Q   V  + E S     V    DY    R
Sbjct: 380 EVG-LQAERVASLMERSALWEDVEVHLDYAQQPR 412


>gi|222096949|ref|YP_002531006.1| methyltransferase [Bacillus cereus Q1]
 gi|221241007|gb|ACM13717.1| Methyltransferase [Bacillus cereus Q1]
          Length = 217

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 7/208 (3%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
                 +  ++G+  F  +R+ +    F PR  TE LV  A A S           ++DL
Sbjct: 2   RADGLPLEYVVGYAKFCGMRIEVERGVFVPRQRTEFLVHQAEALSCF------GDIVVDL 55

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             G+GAV  AL       +   VDI   A+  A  N  + G       L      S++G 
Sbjct: 56  CCGSGAVGAALAAALGRVELYCVDIDPIAVRCASRNVTSFGGHVFEGDLYKSLPHSLKGN 115

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            + I++N PY+ +  +  L  E R ++P+++LDGG DGL   R +A      L   G   
Sbjct: 116 VNTILANAPYVPTDAIKLLPQEARLYEPKVALDGGEDGLDIQRRVAKEAFLWLAPGGHLL 175

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +E    Q      IF    L      +D
Sbjct: 176 IETSEMQVDQTFEIFAGAGLTT-KVARD 202


>gi|311895758|dbj|BAJ28166.1| putative HemK homolog [Kitasatospora setae KM-6054]
          Length = 272

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 92/230 (40%), Gaps = 25/230 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L              PD          L   +        + +++G+ +F  
Sbjct: 33  AEDEARLLLAAA-----------PDP-------AGLREMVGLRCAGHPLEQVVGFAEFAG 74

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PF 121
           +R+ L+   F PR  +E LV+ A A        R    +LDL  G+GA+  AL     P 
Sbjct: 75  LRVALAPGVFVPRRRSEFLVERAAAL------GRPDAVLLDLCCGSGAIGAALAARLGPG 128

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+  A+ N    G       L +     + G  D++++N PY+ +  + 
Sbjct: 129 VELHAADVDPAAVACARRNLARYGGRVHLGDLDAPLPPGLLGRVDLLLANAPYVPTGEIP 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            L  E RD +P  +LDGG DGL+  R +A    R L   G   +E    Q
Sbjct: 189 LLPPEARDHEPATALDGGADGLAVQRRVAAAAPRWLAPGGRLLIETSGRQ 238


>gi|311268958|ref|XP_003132283.1| PREDICTED: hemK methyltransferase family member 1-like [Sus scrofa]
          Length = 264

 Score =  156 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 10/183 (5%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLG 105
             +  I G  DF+ + L +       RPETE LV+  L     R   +       IL++G
Sbjct: 1   MPVQYIPGEWDFHGLSLKMVPPAIILRPETEELVEWVLEEVTQRPHAVGAHGGPLILEVG 60

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFS 159
            G+GA+ L+LL + P  + + VD    A+ +   NA    + +R         L+ +W  
Sbjct: 61  CGSGAISLSLLSKLPESQVIAVDKGEAAICLTHENAQRLQLQDRIRIIPLDVTLEQNWAH 120

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            +  G  D+++SNPPY+    ++ L  E+  ++   +LDGG +G+     I     R L 
Sbjct: 121 LLPWGPVDLVISNPPYVFHRDMEQLAPEILSYEDPTALDGGEEGMDIITHILALAPRLLK 180

Query: 219 KDG 221
             G
Sbjct: 181 DSG 183


>gi|290982847|ref|XP_002674141.1| predicted protein [Naegleria gruberi]
 gi|284087729|gb|EFC41397.1| predicted protein [Naegleria gruberi]
          Length = 250

 Score =  156 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 50/253 (19%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD----------VVR 100
           +  I+G  DF+     + S    PR ++E+L+++ L   +P I KR+           +R
Sbjct: 1   MEYIVGNVDFFGRNFNVDSRVLIPRVDSEVLIETTLNQIVPLILKRNGVTNLSQLDRPLR 60

Query: 101 ILDLGTGTGA-----------VCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----- 144
           I+++G G+G            + L         +  G+D S  AL++A  NA        
Sbjct: 61  IMEIGVGSGCLLITLLLELEKIGL------QKVRAFGIDKSEGALKVATLNAQNLIPKYM 114

Query: 145 ----GVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVD-CLGLEVRDFDPRI 194
                  +  + +Q D F   + +      D+I+SNPPYI + +V   L  +V   +P +
Sbjct: 115 ELAGKDLKELEFIQHDIFKDDDWIHKDLEMDLIISNPPYIPTNVVQNELDKDVSTHEPHM 174

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNK----DGLCSVEIGYNQKVDVVR--IFESRKLFLVN 248
           +LDGG+DG   Y  +   V   L+     +G C +E+GY+Q   +    I     L  + 
Sbjct: 175 ALDGGLDGFDFYNYLL--VDNVLSSKYNLNGHCVMEVGYDQANSLRERIINSRSSLQFLG 232

Query: 249 AFKDYGGNDRVLL 261
             KD  G +RV++
Sbjct: 233 TAKDLSGYERVVM 245


>gi|71665723|ref|XP_819828.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70885147|gb|EAN97977.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 420

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 48/274 (17%)

Query: 32  DRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           D  R  +  A+++ +  H+ +  I+G + FY   +        PRPETE+     +   L
Sbjct: 140 DAARRAVKKAVLQRVDLHKPLAYIIGNQPFYGCNIHCFPPLLCPRPETEMWTHWFVQRHL 199

Query: 91  PR--IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            R   +++  +R+LD+  GTG V +A+    P  + V VD+  +A+++++ NA  NG+  
Sbjct: 200 SRATADEKSPLRVLDMCCGTGCVGIAIAVHLPHTEVVAVDVMEEAVKVSEENARRNGIHV 259

Query: 149 -RFDTLQSDWFSSV----------------------------EGLFDVIVSNPPYIESVI 179
            R+  ++SD F +                              G FD+IVSNPPY+    
Sbjct: 260 SRYRAIKSDMFEAFVELDDTSSSGKNKEGISENKKTQIADLHVGSFDIIVSNPPYVLPEQ 319

Query: 180 VDCLGLEVRDFDPRISLDGG----IDGLSHYRTIADGVSRHLNK----DGLC------SV 225
              L   ++ ++ +I+L G          +++ + +  S  L      +          V
Sbjct: 320 YVQLHPGIKLWESKIALVGDAKRENHQYLYFQELCEMGSVMLKPKVRRNATLASAPNFIV 379

Query: 226 EIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDR 258
           E+G  Q   V  + E S     V    DY    R
Sbjct: 380 EVG-LQAERVASLMERSALWEDVEVHLDYAQQPR 412


>gi|258626138|ref|ZP_05720986.1| Protein hemK [Vibrio mimicus VM603]
 gi|258581493|gb|EEW06394.1| Protein hemK [Vibrio mimicus VM603]
          Length = 177

 Score =  156 bits (394), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   LC V       ++  PD  L+      L   + R +  E +  ILG R+F++
Sbjct: 24  PALDAAVLLCHVLAKPRSYLLTWPDKTLEKPALVSLNALLTRRMAGEPVAYILGEREFWS 83

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L +S  T  PRP+TE LV+ AL  +           +LDLGTGTGA+ LAL  E P  
Sbjct: 84  LPLKVSPSTLIPRPDTERLVELALEKA-----ALIEGELLDLGTGTGAIALALASELPLR 138

Query: 123 KGVGVDISCKALEIAKSNAVTN 144
           +  G+D+  +A E+A+ NA   
Sbjct: 139 RVTGIDLRPEAAELAQENATRL 160


>gi|190344541|gb|EDK36231.2| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 323

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 23/243 (9%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
              T A  R  +   +  ILG + F  + +    +   PR ETE  V   L       + 
Sbjct: 79  QKWTWAAKRRSRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNIL---EKN 135

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFD 151
              ++++D+ TGTG + LA+  + P  +  G+D+S  A+E+ K N        GVS    
Sbjct: 136 SKSLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTIS 195

Query: 152 TLQSDWFSSVE---GLFDVIVSNPPYIESVI------VDCLGLEVRDFDPRISLDGGIDG 202
            L  + F          D++ +NPPYI          ++ +   V+ ++P+++L G    
Sbjct: 196 FLVGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVSKSVKKYEPQLALIGD--- 252

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  Y  +       L  +     E+G   Q   V +  +   ++   +  D  G  R + 
Sbjct: 253 LEFYDALISNYVVPLEVE-AFVFEVGDEKQVKHVQQKLQ--GVYNCGSVYDSQGKIRCVA 309

Query: 262 FCR 264
             +
Sbjct: 310 GWK 312


>gi|229168050|ref|ZP_04295779.1| Modification methylase, HemK [Bacillus cereus AH621]
 gi|228615416|gb|EEK72512.1| Modification methylase, HemK [Bacillus cereus AH621]
          Length = 258

 Score =  155 bits (393), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 96/227 (42%), Gaps = 11/227 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              ++++     L       L   +   +    +  ++G+ +F  +R+ +    F PR  
Sbjct: 21  DETRLLMS--EALTPE---DLMKMVEMRVNGLPLEYVVGYTEFCGLRIEVDRGVFVPRKR 75

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV    A S      R    I+DL  G+GAV  AL       +   VDI   A++ A
Sbjct: 76  TEFLVHQTEALS------RSSDIIVDLCCGSGAVGAALAAALGRVELYSVDIDPIAVQCA 129

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N    G       L      S++G  +++V+N PY+ + I+  L  E R ++P ++LD
Sbjct: 130 SRNVTNFGGHAFEGDLYKALPDSLKGHVNILVANVPYVPTEIIKFLPREARLYEPHVTLD 189

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           GG DGL+  R +A+     L  DG   +E    Q      IF    L
Sbjct: 190 GGEDGLNILRRVAEEALLWLALDGHLLIETSEVQAPQAFEIFAGAGL 236


>gi|169838091|ref|ZP_02871279.1| Methyltransferase [candidate division TM7 single-cell isolate TM7a]
          Length = 268

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 11/225 (4%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRL 65
           +      V  +    +       ++D +   +   I +  + +  +  +L  ++FY  + 
Sbjct: 24  AEIVFSHVLNIDRMMLFTKYRDDIEDEEIEKIRYFIQKIGREKFPVQYLLNEQEFYGRKF 83

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKG 124
            +      PR +TE+LV+  +     ++ K ++  +ILD+G G+G + +    E      
Sbjct: 84  YVDKGVLIPRQDTEILVEKMIDILKDKVLKNEIHPKILDIGVGSGIIGITAALEIESSYV 143

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
           +GVDIS KALE A+ N     VS     L+SD F +VE   FD+IVSNPPYI    V  +
Sbjct: 144 LGVDISDKALETAQKNKEILKVS-NIKFLKSDLFENVEFREFDMIVSNPPYISLNEVGIM 202

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             +    +P  +L    DGL     I   V RHL    +  + +G
Sbjct: 203 SDDTLLHEPSEALFAENDGLYF---IMKFVRRHL----IIWLILG 240


>gi|146422019|ref|XP_001486952.1| hypothetical protein PGUG_00329 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 323

 Score =  155 bits (393), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 23/243 (9%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
              T A  R L+   +  ILG + F  + +    +   PR ETE  V   L       + 
Sbjct: 79  QKWTWAAKRRLRLVPLQYILGSQPFGELTILCKENVLIPRWETEEWVGHLLNIL---EKN 135

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN----GVSERFD 151
             +++++D+ TGTG + LA+  + P  +  G+D+S  A+E+ K N        GVS    
Sbjct: 136 SKLLKVVDVCTGTGCIPLAIKHKRPQDEVCGIDVSETAIELCKENLALYSRDFGVSSTIS 195

Query: 152 TLQSDWFSSVE---GLFDVIVSNPPYIESVI------VDCLGLEVRDFDPRISLDGGIDG 202
            L  + F          D++ +NPPYI          ++ +   V+ ++P+++L G    
Sbjct: 196 FLVGNVFQKHPSSLYKVDLLTANPPYIPREEYNSPVALNGVLKSVKKYEPQLALIGD--- 252

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           L  Y  +       L  +     E+G   Q   V +  +   ++   +  D  G  R + 
Sbjct: 253 LEFYDALISNYVVPLEVE-AFVFEVGDEKQVKHVQQKLQ--GVYNCGSVYDSQGKIRCVA 309

Query: 262 FCR 264
             +
Sbjct: 310 GWK 312


>gi|139439317|ref|ZP_01772759.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC
           25986]
 gi|133775341|gb|EBA39161.1| Hypothetical protein COLAER_01775 [Collinsella aerofaciens ATCC
           25986]
          Length = 418

 Score =  155 bits (392), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 6/169 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSE-----RFD 151
             RIL++G GTG + L+L  E          DI  +A+++A  N    G++         
Sbjct: 239 TARILEVGCGTGCISLSLAWERRGHVACTATDIEPRAIDLATKNRDALGLTSGEVAFSLT 298

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            L S       G FDV+VSNPPYI + ++  L  EV+DF+P ++L+GG DGL  +R + +
Sbjct: 299 NLVSSIPHDEWGTFDVLVSNPPYIPTDVMRSLPHEVKDFEPDLALEGGADGLDIFRRLLN 358

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                L   GL + E+          +     L  V    D     R++
Sbjct: 359 AAPYMLRAGGLFACELYEGALDAAAELCRQAGLSDVRIVHDLTNRPRIV 407



 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 41/93 (44%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   LC  TGL+   + +  D  LD  Q   +  A+VR  K E +  I G   F  + + 
Sbjct: 31  AEWLLCAATGLARIDLYMRMDETLDAAQLETMHAAVVRRAKGEPLQYITGSTQFRMIDVA 90

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
            +     PRPETE+LV+  L +    +   +  
Sbjct: 91  CAPGVLIPRPETEMLVEEVLNYLDAEVLSPEAA 123


>gi|309808054|ref|ZP_07701972.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
 gi|308168656|gb|EFO70756.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a]
          Length = 223

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 13/208 (6%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
             D    L     L+  Q  +  D  L   Q   +   + +  K  S   I+G   F   
Sbjct: 20  AEDVDFVLAERQNLTPSQYRLQLDQDLPKEQLTQIKKDLNKLHKGMSPQYIVGHAWFLGY 79

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + +      PR ETE LV  AL +       +D  ++LDLGTG+GA+ +AL K++    
Sbjct: 80  SIDVHPGVLIPRFETEELVTWALDYL------KDNSKVLDLGTGSGAITVALAKKAECKN 133

Query: 124 G-----VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                    DI+  AL  ++ N +   +++     ++D    +E  FD+I+SNPPYI++ 
Sbjct: 134 INNIVYYASDITDSALRQSEENFLKFNLNDIIT-RKADALIGLE-KFDLIISNPPYIKNS 191

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             D +   V   +P  +L      L   
Sbjct: 192 EKDLMDQNVIKNEPEEALFCWSRWLRFL 219


>gi|150866938|ref|XP_001386704.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces
           stipitis CBS 6054]
 gi|149388194|gb|ABN68675.2| S-adenosylmethionine-dependent methyltransferase [Scheffersomyces
           stipitis CBS 6054]
          Length = 318

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 98/261 (37%), Gaps = 37/261 (14%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRI 93
           +    +AI    +   +  ILG + F ++ +        PR ETE  V + A AF   + 
Sbjct: 45  KNKWKSAIRERSQLIPLQYILGSQPFGSLDIHCRPGVLIPRWETEEWVTELADAFGKRKN 104

Query: 94  EKRDV-----VRILDLGTGTGAVCLA----LLKESPFFKGVGVDISCKALEIAKSNAVTN 144
              +      + ++D  TGTG + L     LL +       G DIS +A +++  N    
Sbjct: 105 TTNNGKLSNSLNVIDACTGTGCIPLLLHSDLLSKGVCSNVTGFDISLEAYKLSCENLAIY 164

Query: 145 GVS-----------ERFDTLQSDWFSSVE---GLFDVIVSNPPYIE------SVIVDCLG 184
             S           +  D    D    +E      D+I SNPPYI       SV  +   
Sbjct: 165 ESSRDISDNGKVSFKHVDIFSHDLLEQLEVTSRSVDLITSNPPYIPLQDYKSSVDFNGTS 224

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL-NKDGLCSVEIGY-NQKVDVVRIFESR 242
             VR  +P ++L G       Y T+   +   L  K      E+GY  Q   V  +    
Sbjct: 225 RSVRLHEPALALVGEN---EFYETLITKL--VLPTKAKAFVFELGYEEQAQRVKELLFPF 279

Query: 243 KLFLVNAFKDYGGNDRVLLFC 263
           K + V  + D  GN R +L  
Sbjct: 280 KKWKVKRYTDSAGNIRCVLGW 300


>gi|226323868|ref|ZP_03799386.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758]
 gi|225207417|gb|EEG89771.1| hypothetical protein COPCOM_01643 [Coprococcus comes ATCC 27758]
          Length = 166

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 1/144 (0%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   DS   L  VTG+   +  VD    +   +       +        +  + G ++F 
Sbjct: 21  EPESDSWILLEHVTGMIRTRYYVDGFERMPKNEEDRFFELVSCRKTRIPVQHLTGVQEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                ++     PR +TE+LV+ A    L  ++K + V++LD+ TG+G + ++L   +P 
Sbjct: 81  GYEFAVNEHVLVPRQDTEILVEEAEKRLL-LMKKENPVKVLDMCTGSGCIPISLKLRNPQ 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNG 145
               G DIS +AL++A+ NA   G
Sbjct: 140 IVIEGADISEEALKVAEKNAKKAG 163


>gi|163940957|ref|YP_001645841.1| HemK family modification methylase [Bacillus weihenstephanensis
           KBAB4]
 gi|229134149|ref|ZP_04262968.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196]
 gi|163863154|gb|ABY44213.1| modification methylase, HemK family [Bacillus weihenstephanensis
           KBAB4]
 gi|228649322|gb|EEL05338.1| Modification methylase, HemK [Bacillus cereus BDRD-ST196]
          Length = 258

 Score =  153 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 11/227 (4%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
              ++++     L       L   +   +    +  ++G+ +F  +R+ +    F PR  
Sbjct: 21  DETRLLMS--EALTPE---DLMKMVEMRVNGLPLEYVVGYTEFCGLRIEVDRGVFVPRKR 75

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           TE LV          +  R    I+DL  G+GAV  AL       +   VDI   A++ A
Sbjct: 76  TEFLVHQ------TEVLSRSSDIIVDLCCGSGAVGAALAAALGRVELYSVDIDPIAVQCA 129

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N    G       L      S++G  +++V+N PY+ + I+  L  E R ++P ++LD
Sbjct: 130 SRNVTNFGGRAFEGDLYKALPDSLKGHVNILVANVPYVPTEIIKFLPREARLYEPNVTLD 189

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           GG DGL+  R +A+     L  DG   +E    Q      IF    L
Sbjct: 190 GGEDGLNILRRVAEEALLWLALDGHLLIETSEVQAPQAFEIFAGAGL 236


>gi|26553518|ref|NP_757452.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma
           penetrans HF-2]
 gi|26453524|dbj|BAC43856.1| S-adenosylmethionine-dependent methyltransferase [Mycoplasma
           penetrans HF-2]
          Length = 290

 Score =  152 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 54/252 (21%), Positives = 103/252 (40%), Gaps = 13/252 (5%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
           +S  +  + D+ +D   +  L        K+  +  I     FY +   +    F PR E
Sbjct: 47  NSSDIFFEKDTEIDFEYKKILKQLNKVLNKNIPVQYITKSFSFYGLSFFIKKGCFVPRQE 106

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKGVGVDISCKALE 135
           T    +  L +++ + +  D   ILDL +G+G +   ++ +K++     +GV+ +    +
Sbjct: 107 T----EYMLDWAVKQKKLIDKKYILDLCSGSGVLANTISYIKKNKDAIVIGVEKNRTPYK 162

Query: 136 IAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +   N     +  +F  ++SD F    S     D I+ NPPYI+      +    +  +P
Sbjct: 163 VGVKNQRNLKLKTQF--IKSDIFKIDRSHYEKCDFIICNPPYIDKND-PNVDPSTKC-EP 218

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           + +L    +G   Y      +   L        EIG+NQK ++ +      + +    KD
Sbjct: 219 KQALFAPQNGYYFYFRFLSEIYPILANGTEIIFEIGFNQKEEIEKFLIKNNITVFKFLKD 278

Query: 253 YGGNDRVLLFCR 264
               DRVL   +
Sbjct: 279 LDDKDRVLYIKK 290


>gi|294660261|ref|NP_852920.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)]
 gi|284811918|gb|AAP56488.2| HemK-like methylase [Mycoplasma gallisepticum str. R(low)]
 gi|284930382|gb|ADC30321.1| HemK-like methylase [Mycoplasma gallisepticum str. R(high)]
          Length = 284

 Score =  152 bits (385), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 103/248 (41%), Gaps = 8/248 (3%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +   +I   +  +D            R  K E  +  I+   +   ++L +      PR 
Sbjct: 38  NKTDLITLRNEEIDFN-FDQFIKDCNRIYKDEYPVEYIINQIEINGLKLFVDETVLIPRI 96

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +T  +++  L     R   +D+V +LD+ TGTG + L + K+ P ++  G DIS  A++I
Sbjct: 97  DTNAVIEKFLEVINSR---KDIVNVLDICTGTGLIALTIKKQFPKYQVFGSDISKSAVKI 153

Query: 137 AKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A  NAV N +  RF      + F  V    D ++ NPPY++  +      E+ +++P  +
Sbjct: 154 ANFNAVNNLLDARFYVADYLEVFEQVSEEIDALIINPPYLDEELKSNYIKEI-NYEPFNA 212

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKDYG 254
           L     G   Y  I   ++ +  K  +  +E         V++ +   L+     F D  
Sbjct: 213 LFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFSERIYEKTVQLLKKYGLYDKTTFFNDAN 272

Query: 255 GNDRVLLF 262
              R  + 
Sbjct: 273 DKLRGFII 280


>gi|319441089|ref|ZP_07990245.1| methylase of peptide chain release factors [Corynebacterium
           variabile DSM 44702]
          Length = 348

 Score =  152 bits (384), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 99/280 (35%), Gaps = 41/280 (14%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           ++   +++     +           + R    E +  ILG      V L +    F PRP
Sbjct: 55  VTPMDLVLRGGDPVP----ASFPPMVERRAAREPLQFILGTAPVVGVDLAVGPGVFIPRP 110

Query: 77  ETELLVDSALAFSLPRIEKR-----------DVVRILDLGTGTGAVCLALLK-------- 117
           ET+LL+D A +       +R               ++D  +G G + L L          
Sbjct: 111 ETDLLIDWAASRITDWETRRRSTPLRAALVPPRFTVVDFCSGPGTISLGLAHMLTRSRLA 170

Query: 118 ESPFFKGVGVDISCKALEIAKSNA----VTNGVSER--FDTLQSDWFSS-------VEGL 164
           +    + +G+++S  AL+ A  N         +  R   +  + D   +       +   
Sbjct: 171 DRLDLRIIGIELSPTALDYAGRNLSDWQARGDIDPRIAVEFHRGDATDAALVTGLGLVAG 230

Query: 165 FDVIVSNPPYIESVI----VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D+++SNPPY+        V     EV   DP  ++  G DGL   R +A  ++      
Sbjct: 231 ADLVLSNPPYVPEGDHGEHVAAADPEV-GADPHEAVYSGADGLELMRPLARIIAMTCAPH 289

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
              +VE        V  +     +      +D+ G DR +
Sbjct: 290 AEIAVEHDDATGQQVRELLADAGIADPVQHRDFAGRDRFV 329


>gi|304407780|ref|ZP_07389431.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus curdlanolyticus YK9]
 gi|304343263|gb|EFM09106.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Paenibacillus curdlanolyticus YK9]
          Length = 377

 Score =  151 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 11/171 (6%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   +  V G    +++ D    + +         + R    E +  +LG + FY
Sbjct: 38  EPRSNAELLIGHVLGFGKAELLRDWREPMPEEAFARWAKLVARKAAGEPVQYLLGEQWFY 97

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-----------VRILDLGTGTGA 110
                +++    PRPETELLV++ LA +     + +            + +LD+GTG+GA
Sbjct: 98  GRPFAVTAAVLIPRPETELLVEAVLAEADALWPRGEAAAAGQEARVRELTVLDVGTGSGA 157

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           + + L  E   ++    D+S  AL++A  NA  +  + R   ++ D  +  
Sbjct: 158 IAVTLAAERSDWRVYASDLSPDALQVALGNAWRHAGAGRIAFVEGDLLTPF 208



 Score =  115 bits (290), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             DV+VSNPPYI +  +  L  EVRD++PR++LDGG+DGL  YR +A+ + R      + 
Sbjct: 269 RIDVLVSNPPYIPAGDLPDLQTEVRDYEPRLALDGGMDGLDPYRRMAEQLLRLAELPRIV 328

Query: 224 SVEIGYNQKVDVVRIFESRKLFL-VNAFKDYGGNDRVLLFCR 264
           + E+G  Q  DV  +  S   +  +    DYGG DR ++  +
Sbjct: 329 AFELGMGQAEDVAELLRSIGYWDHIRIITDYGGIDRHVVAVK 370


>gi|149239086|ref|XP_001525419.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450912|gb|EDK45168.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 308

 Score =  151 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 46/290 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           ++A RD          ++  Q+ +    + L   +      AI R  +   +  IL  + 
Sbjct: 23  LRANRD----------INRAQLELKWIKNELPKEE---WIMAINRRARLVPLQYILKSQP 69

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + +        PR ETE    + LA  L +   R  ++I+D  TGTG + L L  + 
Sbjct: 70  FGGLSIACREGVLVPRWETEEWC-TRLAELLEKNNAR-TLKIVDACTGTGCIPLLLNHQI 127

Query: 120 P----FFKGVGVDISCKALEIAKSNAVTNGVSE-------RFDTLQSDWFSSVEGL---- 164
                 F+ +G D+S +ALE+AK N  T   +        +     ++ F          
Sbjct: 128 KYFADKFEAIGFDVSIEALELAKKNLKTYISNHDMSSTQTKISFQSANVFDPNLCKNFSE 187

Query: 165 ---FDVIVSNPPYIESVIV------DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               D++ +NPPYI +         + +   VR ++PR++L G +     Y  + + V  
Sbjct: 188 IGDIDIVTANPPYIPAEDYLKSTQRNGVERSVRLYEPRLALVGDV---EFYTQLINNVVL 244

Query: 216 HLNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            L+  G    E+GY +Q   V +  +S  L+ V    D     R ++  R
Sbjct: 245 PLSAKGF-VFELGYVHQACAVRQALDSN-LWGVGTMNDSATKLRCVVGWR 292


>gi|152968275|ref|YP_001364059.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
 gi|151362792|gb|ABS05795.1| modification methylase, HemK family [Kineococcus radiotolerans
           SRS30216]
          Length = 272

 Score =  151 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 9/232 (3%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81
           V  + ++ L       L + + R +  E +  +LGW +F   R  ++   F PR  +  L
Sbjct: 30  VFAEREAELLLAAPGDLADLLARRVAGERLEDVLGWAEFAGRRYAVAPGVFVPRHRSAFL 89

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD   A +      R    +LDLG GTGA+  A+ +  P       D+   A+  A+ N 
Sbjct: 90  VDLVAARA------RAGDVVLDLGCGTGALVGAVRERVPGLVVHAADVDPAAVACARRN- 142

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G +     L +    ++ G  DV+++N PY+ +  +  L  E+R+ + R +LDGG D
Sbjct: 143 -LPGAAVHEGDLFAALPPTLRGRLDVVIANVPYVPTAQIAHLPAEMREHEDRRTLDGGGD 201

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-FLVNAFKD 252
           GL   R +  G    L+  G   VE+  +Q      +     L   V    D
Sbjct: 202 GLDVLRRVLGGAGDWLSARGRVFVELDEDQTGPAADVAARCGLDARVETRTD 253


>gi|170782046|ref|YP_001710378.1| HemK family methyltransferase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156614|emb|CAQ01766.1| putative HemK-family methyltransferase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 274

 Score =  151 bits (383), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 84/199 (42%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +  E +  +LGW  F   R+ +    F PR  TE L  +A+  +     +     ++D+ 
Sbjct: 51  VAGEPLETVLGWVAFAGRRIIVRPGVFVPRRRTEQLAGAAVEAAAQATRRTGHAVVVDMC 110

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G+GA+   +  E P       D+   A+  A  N V  G +     L +     + G  
Sbjct: 111 CGSGAIGAVVADEVPGAVLHAADVDPAAVACAAENLVPRGAAVHRGDLMAALPPELRGRI 170

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DV+V+N PY+  V +  +  E R  +P ++ DGG DGL   R +A      L   G   V
Sbjct: 171 DVLVANVPYVPRVGLALMPPEARLHEPEVTRDGGEDGLDVLRRVAAEGREWLAPTGTVLV 230

Query: 226 EIGYNQKVDVVRIFESRKL 244
           E+   Q    ++   +  L
Sbjct: 231 EVADAQVTGALQAMRAAGL 249


>gi|284931147|gb|ADC31085.1| HemK-like methylase [Mycoplasma gallisepticum str. F]
          Length = 284

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 10/259 (3%)

Query: 9   SFLCRVTGL--SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRL 65
             +   +    +   +I   +  +D            R  K E  +  I+   +   ++L
Sbjct: 27  LLIKHYSEKIENKTDLITLRNEEIDFN-FDQFIKDCNRIYKDEYPVEYIINQIEINGLKL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +      PR +T  +++  L     R   +D+V +LD+ TGTG + L + K+ P ++  
Sbjct: 86  FVDETVLIPRIDTNAVIEKFLEVINLR---KDIVNVLDICTGTGLIALTIKKQFPKYQVF 142

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           G DIS  A++IA  NAV N +  RF      + F  V    D ++ NPPY++  +     
Sbjct: 143 GSDISKSAVKIANFNAVNNLLDARFYVADYLEVFEQVSEEIDALIINPPYLDEELKSNYI 202

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            E+ +++P  +L     G   Y  I   ++ +  K  +  +E         V++ +   L
Sbjct: 203 KEI-NYEPFNALFAKNGGTFFYEEIFRYLTTNKTKIKVLCMEFSEPIYEKTVQLLKKYGL 261

Query: 245 FL-VNAFKDYGGNDRVLLF 262
           +     F D     R  + 
Sbjct: 262 YDKTAFFNDANDKLRGFII 280


>gi|255721327|ref|XP_002545598.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136087|gb|EER35640.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 308

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 63/250 (25%), Positives = 102/250 (40%), Gaps = 26/250 (10%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           +   NA+++  K   +  IL  + F  + +        PR ETE      L  +L +I K
Sbjct: 46  YEWANAVLQRQKLVPLQYILKSQPFGELSIICREGVLIPRWETEEWCIK-LIHALKQIPK 104

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTN-----GVSE 148
           +D + ILD+ TGTG + L +  E   +  +  G D+S KA E+A  N             
Sbjct: 105 QDELSILDVCTGTGCIPLLMAHELREYAPQIHGFDVSGKAYELAIENLEAYKKKYPHNKV 164

Query: 149 RFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIV------DCLGLEVRDFDPRISL 196
             +    D F +           D+I SNPPYI           D +   VR ++P+++L
Sbjct: 165 TLNYHLGDVFDAEIISKLSIPRIDLITSNPPYIPMEDYVRSARQDGVEKSVRLYEPKLAL 224

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDV-VRIFESRKLFLVNAFKDYG 254
            G  DG   Y  +   +      +G    E+GY +Q   V   + ++   + V   KD  
Sbjct: 225 VG--DG-EFYYALLQNIVIQSAAEGFI-FEVGYKDQADFVNTEVQKNLNSWKVGIMKDGA 280

Query: 255 GNDRVLLFCR 264
              R +L  +
Sbjct: 281 SKVRCVLGWK 290


>gi|225013053|ref|ZP_03703468.1| methyltransferase small [Flavobacteria bacterium MS024-2A]
 gi|225002781|gb|EEG40762.1| methyltransferase small [Flavobacteria bacterium MS024-2A]
          Length = 220

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 8/186 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
            E LV+  L       EK+    ++D GTG+G + +AL KE P F+   +D     L +A
Sbjct: 35  MEELVNWVLEDHQNLEEKQ---TLIDFGTGSGCIAIALAKEQPSFEVTAIDFYSSVLNLA 91

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           K NA+ N  S     LQ D    ++++   D+IVSNPPYI       +   V +++P ++
Sbjct: 92  KQNAIKNKTS--VSFLQHDILQLNTLKLNVDIIVSNPPYIPPSEQREMKPNVLNYEPHLA 149

Query: 196 LD-GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           L     D L  Y +I +    +L  DGL   EI      ++  +  S K++ +   KD  
Sbjct: 150 LFVPENDPLIFYCSILEYGLLYLVSDGLIYFEINPRFLSEMKSLILSFKVYSILERKDIF 209

Query: 255 GNDRVL 260
           G  R+L
Sbjct: 210 GKLRML 215


>gi|218514634|ref|ZP_03511474.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli 8C-3]
          Length = 120

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/118 (46%), Positives = 74/118 (62%)

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +RF  +QS WF ++ G F  IVSNPPYI S ++  L  EV  FDP  +LDGG DGL  
Sbjct: 1   MQDRFHAVQSSWFENIRGSFHAIVSNPPYIASNVIHDLAPEVTKFDPVAALDGGPDGLDA 60

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           Y  IA   +R +  DG+  +EIGY+Q+ DV  IFE++    + + KDYG NDR L+F 
Sbjct: 61  YHAIAKDAARFMRPDGVLGLEIGYDQRNDVTAIFEAKGFRCLKSVKDYGQNDRALMFA 118


>gi|294955906|ref|XP_002788739.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983]
 gi|239904280|gb|EER20535.1| n6-DNA-methyltransferase, putative [Perkinsus marinus ATCC 50983]
          Length = 213

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 22/210 (10%)

Query: 72  FEPR----------PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + PR          PETEL+V   L   LP        RILDL +G+G + +AL      
Sbjct: 2   YIPRGFTKVCGQAIPETELMVQRILEGGLP-----GGRRILDLCSGSGVIGIALATAWAT 56

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVI 179
            +    D+S +A+ +A+ NA   GV +R   L             +D++VSNPPYI +  
Sbjct: 57  MRVDLADLSEQAMGLARENAKRFGVYDRLKFLVGPISDQEFTANSYDMVVSNPPYIPTES 116

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN--QKVDVVR 237
           V  L   V++ +  ++LDGG +G++  + + +  S  L  +G+  +E+     Q   V  
Sbjct: 117 VGNLSRTVKNHEDILALDGGEEGMNIVQEVLNVSSMVLKPNGMLWMELHAESSQHRSVEE 176

Query: 238 IFESRKLFLV---NAFKDYGGNDRVLLFCR 264
                    +       D     R +L  +
Sbjct: 177 YIARHHATELVMQEVVLDLRDMPRFVLIRK 206


>gi|296417256|ref|XP_002838274.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634202|emb|CAZ82465.1| unnamed protein product [Tuber melanosporum]
          Length = 324

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 25/250 (10%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           L     +  +   +  +LG + F  + +        PRPETE          L  +    
Sbjct: 56  LKALCEKRGRGWPLQYLLGTQPFGALEMICERGVLIPRPETEQSASHLGGHMLKHLHPHS 115

Query: 98  VVRILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTN------GVS 147
            VRI+DL TGTG + L L  +        + +GVDIS KAL  +K N   N         
Sbjct: 116 QVRIVDLCTGTGCIPLLLHNQLSAAGMSSRILGVDISVKALRSSKRNLEHNEKVLSANAR 175

Query: 148 ERFDTLQSDWF------SSVEGLF---DVIVSNPPYIESVIVD-CLGLEVRDFDPRISLD 197
           E  +    D         ++ G     D+++SNPPYI     +   G  VR+++P+++L 
Sbjct: 176 EDIEFFGGDVLAVDSLVETIGGKLQGVDIVISNPPYISKESFNRSTGRSVRNYEPKLALV 235

Query: 198 G-GIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKLFL-VNAFKDYG 254
             G +G   Y  I   V+  L    + + VE G+ Q   V + +    ++  V  +KD+ 
Sbjct: 236 PKGGNGDIFYPAI-GRVAESLGSQAVIAEVE-GWEQANRVKQEWAGSGVWEGVGIWKDFA 293

Query: 255 GNDRVLLFCR 264
           G  R ++  R
Sbjct: 294 GIGRTVVGWR 303


>gi|195091706|ref|XP_001997556.1| GH23445 [Drosophila grimshawi]
 gi|193905933|gb|EDW04800.1| GH23445 [Drosophila grimshawi]
          Length = 249

 Score =  148 bits (375), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 12/186 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
            +  V     + V  D   +  +  Q       +        +  I+G  DF ++ L  +
Sbjct: 66  IVSHVLKRKFNTVPDDFSQLKFNSAQLADFERFLEARCARMPLQHIIGEWDFMDITLKTA 125

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F PRPETE  V   +       ++ + V +L++G G+GA+ L++L   P  +   ++
Sbjct: 126 PTVFIPRPETEEFVRLVID----NYKRAEHVNMLEVGCGSGAMSLSMLHALPQVQATAIE 181

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVD 181
            S  A  +A  NA   G+ +RF+       +         +  +D+I+SNPPY+++    
Sbjct: 182 RSKAATALAWENAKLLGLQQRFEVHNHTMETDKYMPESLHDKRYDLIISNPPYVKTDEFQ 241

Query: 182 CLGLEV 187
            L  EV
Sbjct: 242 YLHPEV 247


>gi|71024435|ref|XP_762447.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
 gi|46097696|gb|EAK82929.1| hypothetical protein UM06300.1 [Ustilago maydis 521]
          Length = 721

 Score =  147 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 99/256 (38%), Gaps = 47/256 (18%)

Query: 30  LDDRQRFFLTNAIVRS-LKHESIHRILGWRDFYNVR--LTLSSDTFEPRPETELLVDSAL 86
           L   QR  L     +    +  +  +LG   F +++  LT+      PRPETE      +
Sbjct: 119 LTRDQRRRLVWMTRQMTRNNVPLSYLLGSVPFGSLKNELTVRPPVLLPRPETEDWATQVV 178

Query: 87  AFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESP-------FFKGVGVDISCKALEIAK 138
           +  L    E+ D VRI+DL TG+G + L +             +K V  D S  A+EIA+
Sbjct: 179 SVLLNLSREQLDKVRIVDLCTGSGCIALLVADALRTRLGAAGEWKVVACDRSPIAVEIAQ 238

Query: 139 SNAVTNGVSER-----FDTLQSDWFSSVE---------GLFDVIVSNPPYIESVIVDCLG 184
            NA   G            +Q+D F   +         G F +IVSNPPYI       L 
Sbjct: 239 ENAQKLGFEINQKQSNLHIVQADIFEDGDMDRLAVIAGGPFGLIVSNPPYIPRREWATLS 298

Query: 185 LEVRDFDPRISLDGGID-----------------GLSHYRTIADGVSR-----HLNKDGL 222
            EV+  +   +L G  D                 GL+ ++ +AD + R            
Sbjct: 299 NEVKQHEDPAALIGERDPESAESSSERQRFLDRHGLAFHQRLADLLYRPTFSTSFAPLPR 358

Query: 223 CSVEIGYNQKVDVVRI 238
              E G  Q+  V ++
Sbjct: 359 LVAEYGRGQQKQVEQL 374


>gi|238879876|gb|EEQ43514.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 306

 Score =  147 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 30/251 (11%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           +    +A+ +  +   +  ILG + F  + +  +     PR ET+   +  +        
Sbjct: 45  KEDWNDAVNQRYQLVPLQYILGSQPFGGLNIKCTQGVLIPRWETQEWCNKLVETLKQTHV 104

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTN-----GVS 147
           K+  + +LD  TGTG + L +  E      K  G+D+S KA ++A  N            
Sbjct: 105 KQ--LVVLDACTGTGCIPLLIGHELNNIAPKIYGLDVSGKAFDLANENLSLYKQRYPNNP 162

Query: 148 ERFDTLQSDWFSSV------EGLFDVIVSNPPYIE------SVIVDCLGLEVRDFDPRIS 195
                   D F +           +++ SNPPYI       S+  D +   V+ ++P ++
Sbjct: 163 IDLKFYLGDVFDAEIMDKLGLPKINLLTSNPPYIPYHDYIKSIDRDGVAKSVKLYEPSLA 222

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGY-NQKVDVVRIFESRKLFLVNAFKD 252
           L G  DG   YR++   +   L          EIGY NQ   V  + E    + +   KD
Sbjct: 223 LLG--DG-EFYRSLVQNI---LRPSQAEAFVFEIGYKNQADYVNFLLEDDSAWSIGVMKD 276

Query: 253 YGGNDRVLLFC 263
              + R +L  
Sbjct: 277 SSNHIRCVLGW 287


>gi|310792351|gb|EFQ27878.1| HemK family methyltransferase [Glomerella graminicola M1.001]
          Length = 342

 Score =  146 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 41/257 (15%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFS 89
               +     R  +   +  +LG + F  + +        PR ETE     L +  ++  
Sbjct: 53  AEASVARLCARRGRGVPLQYVLGSQPFGALDIRCRPGVLAPRAETEAYALHLTEMIVSGR 112

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLA----LLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LP  + R  +RI+D  TGTG + LA    L + +      GVD+S  A+ +++ N   N 
Sbjct: 113 LPHPQDR-GLRIVDFCTGTGCIALALYEGLARRAARLSVTGVDVSPTAVRLSRENLRHNA 171

Query: 146 VSE---------RFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV----DCLGLEVR 188
            +                +D F           D++VSNPPYI   +       +G  VR
Sbjct: 172 GAGALLRPTEEKNVSFQLADVFDEAAMATIPQCDILVSNPPYISRKVWTYGRGQMGYSVR 231

Query: 189 DFDPRISLDGGI-----DGLS----HYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVVRI 238
            ++PR++L  G      DG       Y  + D   R L    +   E+G   Q V V R+
Sbjct: 232 KYEPRLALVPGDTTPTYDGCDHADVFYARLLDVARR-LRPK-VLLFEVGDQEQAVRVARL 289

Query: 239 FESRKLF---LVNAFKD 252
               +         ++D
Sbjct: 290 VRRNEYTRQATCELWRD 306


>gi|68476947|ref|XP_717451.1| hypothetical protein CaO19.8129 [Candida albicans SC5314]
 gi|68477138|ref|XP_717362.1| hypothetical protein CaO19.499 [Candida albicans SC5314]
 gi|46439071|gb|EAK98393.1| hypothetical protein CaO19.499 [Candida albicans SC5314]
 gi|46439164|gb|EAK98485.1| hypothetical protein CaO19.8129 [Candida albicans SC5314]
          Length = 306

 Score =  146 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 30/251 (11%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           +    +A+ +  +   +  ILG + F  + +        PR ETE   +  +        
Sbjct: 45  KEDWNDAVNQRYQLVPLQYILGSQPFGGLNIKCKQGVLIPRWETEEWCNKLVETLKQTHV 104

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTN-----GVS 147
           K+  + +LD  TGTG + L +  E      K  G+D+S KA ++A  N            
Sbjct: 105 KQ--LVVLDACTGTGCIPLLIGHELNNIAPKIYGLDVSGKAFDLANENLSLYKQRYPNNP 162

Query: 148 ERFDTLQSDWFSSV------EGLFDVIVSNPPYIE------SVIVDCLGLEVRDFDPRIS 195
                   D F +           +++ SNPPYI       S+  D +   V+ ++P ++
Sbjct: 163 IDLKFYLGDVFDAEIMDKLGLPKINLLTSNPPYIPYHDYIKSIDRDGVAKSVKLYEPSLA 222

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG--LCSVEIGY-NQKVDVVRIFESRKLFLVNAFKD 252
           L G  DG   YR++   +   L          EIGY NQ   V  + E    + +   KD
Sbjct: 223 LLG--DG-EFYRSLVQNI---LRPSQAEAFVFEIGYKNQADYVNFLLEDDSAWSIGVMKD 276

Query: 253 YGGNDRVLLFC 263
              + R +L  
Sbjct: 277 SSNHIRCVLGW 287


>gi|241958518|ref|XP_002421978.1| mitochondrial N5-glutamine methyltransferase, putative [Candida
           dubliniensis CD36]
 gi|223645323|emb|CAX39979.1| mitochondrial N5-glutamine methyltransferase, putative [Candida
           dubliniensis CD36]
          Length = 306

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 100/253 (39%), Gaps = 26/253 (10%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL 90
           ++  +    +A+ +  +   +  ILG + F  + +        PR ETE   +  +    
Sbjct: 41  EELPKEDWNDAVNQRYQLVPLQYILGSQPFGGLNIKCKQGVLIPRWETEEWCNKLVDTIK 100

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSE 148
               K+  + +LD  TGTG + L +  +      K  G D+S KA ++A  N        
Sbjct: 101 QIHMKQ--LVVLDACTGTGCIPLLIGHKLSNIASKIYGFDVSGKAFDLANENLSLYRQKH 158

Query: 149 -----RFDTLQSDWFSS-VEGLFD-----VIVSNPPYIE------SVIVDCLGLEVRDFD 191
                       D F + +    D     ++ SNPPYI       S   D +   V+ ++
Sbjct: 159 PNKSMDLKFYLGDVFDAEIMDRLDLPKINLLTSNPPYIPYHDYIKSSDRDGVAKSVKLYE 218

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVNAF 250
           P ++L G  DG   YR++   + R    +G    E+GY NQ   V  + E    + +   
Sbjct: 219 PSLALLG--DG-EFYRSLVQNILRPSQAEGF-VFEVGYKNQADYVNFLLEDESAWSIGVM 274

Query: 251 KDYGGNDRVLLFC 263
           +D   + R ++  
Sbjct: 275 RDSSDHVRCVVGW 287


>gi|50310425|ref|XP_455232.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644368|emb|CAG97940.1| KLLA0F03355p [Kluyveromyces lactis]
          Length = 295

 Score =  146 bits (368), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 53/233 (22%), Positives = 88/233 (37%), Gaps = 17/233 (7%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            +  A         +  IL  + F  + L +      PR ETE      +A  LP   ++
Sbjct: 49  LINRACWLRYNRVPLQYILKTQPFGPLDLLVRPGVLIPRWETEEWCMDLIAK-LPEKARQ 107

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQS 155
              ++LDL +G+G + LA+      +    VD+S KA+ + K N    G+       +Q+
Sbjct: 108 GQFKVLDLCSGSGCIALAIAHTRTEYIVKSVDLSPKAIALLKDNVRKVGLQNTNVQCIQA 167

Query: 156 DWFSSVEG-----LFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D     E       F++I  NPPYI S   V      V+ ++PR++L      L  Y  +
Sbjct: 168 DILRHSEHIYSKDKFNLITCNPPYIPSNNFVKECTTSVKLYEPRLALVAD---LEFYDNL 224

Query: 210 ADG-VSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
               + R   +      E+G   Q   V+        +      D     R +
Sbjct: 225 LQYWIPR--TES--FVYEVGDMKQCQHVINGLSHNTSWKTGIKYDSNDKPRCV 273


>gi|229820159|ref|YP_002881685.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
 gi|229566072|gb|ACQ79923.1| modification methylase, HemK family [Beutenbergia cavernae DSM
           12333]
          Length = 257

 Score =  144 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 15/221 (6%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L     R +  E +  ++GW  F   R+ +S   F PR  +ELL   A+  + P    
Sbjct: 36  EELEALTARRIAGEPLEHVVGWALFAGRRIRVSPGVFVPRSRSELLAREAIRLTRP---- 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DL  G GA+  A+       +    D+   A+  A+       +       + 
Sbjct: 92  --GAVVVDLCCGAGALAAAIADAVVGLELHAADLDPAAVRDARRT-----LDGVAQVHEG 144

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D F+++     G  DV+V+N PY+ +  +  +  E R+ +  ++LDGG DGL   R IA 
Sbjct: 145 DLFAALPQHLRGRVDVLVANTPYVPTDELHLMPREAREHEAPLALDGGGDGLDVQRRIAA 204

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             +  L   G   VE+   Q      I  S  L       D
Sbjct: 205 DAAGWLTPGGHLLVEVSSRQAPTAAAIMASGGLDPRIVHDD 245


>gi|47094310|ref|ZP_00232013.1| HemK protein [Listeria monocytogenes str. 4b H7858]
 gi|47017320|gb|EAL08150.1| HemK protein [Listeria monocytogenes str. 4b H7858]
          Length = 146

 Score =  142 bits (360), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 2/138 (1%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              DIS  AL +AK NA+      RF +T   + F   E  FD+IV+NPPYI       +
Sbjct: 2   TASDISAPALAVAKKNALLLNADVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEM 61

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SR 242
              V   +P ++L    DGL+ Y    D +   LN      VEIGY Q   V ++FE S 
Sbjct: 62  SDYVLKNEPSLALFAENDGLAIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSY 121

Query: 243 KLFLVNAFKDYGGNDRVL 260
               V   KD    DR +
Sbjct: 122 PHSTVIIHKDINSKDRYV 139


>gi|148272854|ref|YP_001222415.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830784|emb|CAN01724.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 288

 Score =  141 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 4/195 (2%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
            L       +    +  +LGW  F   R+ +    F PR  TE L  +A+  +     + 
Sbjct: 57  ELERMTAARIDGAPLEVVLGWAAFAGRRIIVRPGVFVPRRRTERLARAAVDAAR----EV 112

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++DL  G+GA+   +  + P       D+   A+  A +N +  GV+     L   
Sbjct: 113 DAPTVVDLCCGSGAIAAVVADDVPGAVVHAADVDAVAVACAAANLIPRGVAVHRGDLMEA 172

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +++ G  DV+V+N PY+ S  +  +  E R  +P  + DGG DGL   R +A G    
Sbjct: 173 LPTALRGRIDVLVANVPYVPSAGLALMPPEARLHEPEATRDGGADGLDVLRRVARGSGSW 232

Query: 217 LNKDGLCSVEIGYNQ 231
           L  DGL  VE+   Q
Sbjct: 233 LAPDGLLLVEVADEQ 247


>gi|289812520|ref|ZP_06543149.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 139

 Score =  141 bits (357), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +   ++ L D Q+  L   + R  + E I  + G R+F+++ L +S  T  PRP+TE LV
Sbjct: 1   MAFGETPLTDVQQQQLAELLQRRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLV 60

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           + ALA            RILDLGTGTGA+ LAL  E P  +   VD    A+ +A  NA 
Sbjct: 61  EQALARL-----PVKTCRILDLGTGTGAIALALACERPDCEVTAVDRMPDAVALAIRNAE 115

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFD 166
              +      LQS WFS++ G  FD
Sbjct: 116 HLAIR-NVRILQSCWFSALSGQQFD 139


>gi|320533183|ref|ZP_08033904.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134615|gb|EFW26842.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 178

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 9/168 (5%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----W 157
           DL TG+GA+   + KE P  + V V+IS  A  +A+ N     V  R + + +D      
Sbjct: 14  DLCTGSGAIAACVAKEVPGARVVAVEISETAASLARENCERL-VPGRVEVIHADATDPLV 72

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRH 216
              + G  DV+VSNPPY+ +  V+    E    +P ++L GG  DGL     +       
Sbjct: 73  LHDLNGQVDVVVSNPPYVPAGAVE--DTETAQHEPTVALYGGGPDGLDIPIDVLVRSVAL 130

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           L   G+  +E  + Q   +               +D  G DR L   R
Sbjct: 131 LRTGGVLVMEHDHEQGALLRAAALGAGFKQAETGQDLTGRDRYLRAVR 178


>gi|255094437|ref|ZP_05323915.1| protein methyltransferase [Clostridium difficile CIP 107932]
          Length = 151

 Score =  139 bits (352), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
              D+   L +  G+    + ++ +  L + Q+          L    I  I+  R+F  
Sbjct: 21  PRLDTELLLQKTLGVDRLYIHLNLNKELTEEQKTKFMGFAEERLNGRPIAYIVENREFMG 80

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +      PRP+TE LV+  +        ++  V ILD+GTG+GA+ ++L K     
Sbjct: 81  LDFFVKEGVLIPRPDTETLVEEIIEICR----EKKDVSILDIGTGSGAITISLAKYIENS 136

Query: 123 KGVGVDISCKALEI 136
           K +  DIS  ALEI
Sbjct: 137 KIMSFDISETALEI 150


>gi|172040386|ref|YP_001800100.1| methylase of peptide chain release factors [Corynebacterium
           urealyticum DSM 7109]
 gi|171851690|emb|CAQ04666.1| methylase of peptide chain release factors [Corynebacterium
           urealyticum DSM 7109]
          Length = 332

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/309 (20%), Positives = 106/309 (34%), Gaps = 51/309 (16%)

Query: 3   ALRDSHSFLCRVT----GLSSHQVIVDPDSVLD---DRQRFFLTNAIVRSLKHESIHRIL 55
            L D+   +           S +       V     D +     + ++R    E +  I+
Sbjct: 23  PLNDARWLMAYALAGEGNADSPRTPAGLTEVFSAGGDPEPAIFADWVIRRAHREPLQHIV 82

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK----------RDVVRILDLG 105
           G   F+   L   +  F PRPETELL + AL      +E+            +VRI+DL 
Sbjct: 83  GAAPFFGYDLFSDARGFIPRPETELLTEYALGRIRSWLERAAAEPDLRPADGIVRIVDLC 142

Query: 106 TGTGAVCLALLKESPF------------------FKGVGVDISCKALEIAKSNAV----- 142
            G G + LAL  +                      +  G+++   A+E+ + N       
Sbjct: 143 AGPGTIGLALAAQLTEFLRGQATASSADYRWLRTVEATGIELDPAAVELGQENLAYFRRA 202

Query: 143 -TNGVSERFDTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
              G       ++ D           + G   ++V+NPPY+       +       DP I
Sbjct: 203 GLLGEQLDVRLVEGDVRDLEVLDTLGLAGRAQLVVANPPYVPRGSRTDVETGA---DPAI 259

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           ++  G DGL     +A  + R        +VE           I  +  L  V   +D+ 
Sbjct: 260 AVFSGDDGLELMPHVAAAIVRAAAPGAPVAVEHDDATGDQTREILIAAGLSDVEKKQDFA 319

Query: 255 GNDRVLLFC 263
           G DR ++  
Sbjct: 320 GRDRFVVGQ 328


>gi|171693673|ref|XP_001911761.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946785|emb|CAP73589.1| unnamed protein product [Podospora anserina S mat+]
          Length = 336

 Score =  138 bits (349), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 38/248 (15%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  K   +  ILG + F  + +        PRPETE ++   L   LP      
Sbjct: 57  IWQACLKREKGIPLQYILGNQPFGPLDILCKPGVLIPRPETESIITH-LTTLLPFSS--S 113

Query: 98  VVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSER------- 149
            ++ILDL TGTG + L +    P   + +GVDIS  A+ +++ N   N            
Sbjct: 114 PLKILDLCTGTGCIPLLIASLLPSTSQTLGVDISPLAISLSRQNLSHNISLSHLPLSASK 173

Query: 150 -FDTLQSDWFSS--------VEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGG 199
                +SD FS           G  D++ SNPPYI  +         VR ++P+++L   
Sbjct: 174 SITFTKSDIFSPSFLSSLPFSPGELDILTSNPPYISPAGFNKNTERSVRFYEPKLALVPD 233

Query: 200 ID---GLS------HYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRK-----L 244
           ++   G         Y  + + VS  L        E+G   Q   V  +           
Sbjct: 234 VNLGKGYDCLPEDVFYARLLEIVS-VLQPK-RVLFEVGDVEQARRVAEMVVRGGELKNYA 291

Query: 245 FLVNAFKD 252
             V  ++D
Sbjct: 292 GTVEIWRD 299


>gi|50547103|ref|XP_501021.1| YALI0B17534p [Yarrowia lipolytica]
 gi|49646887|emb|CAG83274.1| YALI0B17534p [Yarrowia lipolytica]
          Length = 299

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 20/225 (8%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +  ++G + F ++ +    +   PR ETE               +   +R++DL TGTG
Sbjct: 63  PLQYVIGNQPFGSLNIDCRKNVLIPRSETEEWACHLSNLLKTLARRNKDMRLVDLCTGTG 122

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--- 166
            + L +    P     G+D+S  AL +A+ N   N  S R D +  +    ++   D   
Sbjct: 123 CIALQMAT-LPLALVAGIDVSSDALNLAEHNEKLNQTSLRADKVIFEQLDILDPKNDAKI 181

Query: 167 ------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                 +I +NPPY+   +       V+  +P++++ GG +       I +         
Sbjct: 182 AALHPTIITANPPYVSHEVDAA--QAVKKHEPKLAVFGGNEFYEAIARITNNSGA----- 234

Query: 221 GLCSVEIGY-NQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                E+GY +Q      +   +    +  FKD+    R +   +
Sbjct: 235 QALVTEVGYLDQANYTQSLLP-KDWSSI-VFKDFSDRPRAVFAWK 277


>gi|323339962|ref|ZP_08080229.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
 gi|323092604|gb|EFZ35209.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
          Length = 120

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 1/113 (0%)

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +   SD F++++G FD+IVSNPPYI       +   V + +P ++L    +GL+ Y+ 
Sbjct: 4   KAEFKLSDVFAAIDGKFDIIVSNPPYIAESEKKYMDKSVLEHEPTLALFAENNGLAIYQK 63

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGNDRVL 260
           I   +  HL  DG   +EIG+ Q   VV +FE +     V   KD  G+DR++
Sbjct: 64  ICRQLKDHLKNDGSLYLEIGFLQGKAVVEMFEKAYPKAEVTLKKDESGHDRMV 116


>gi|302851831|ref|XP_002957438.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f.
           nagariensis]
 gi|300257242|gb|EFJ41493.1| hypothetical protein VOLCADRAFT_98562 [Volvox carteri f.
           nagariensis]
          Length = 451

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 87/228 (38%), Gaps = 25/228 (10%)

Query: 37  FLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
            L     R LK       ++    ++   L++      PRPETE+  +     ++     
Sbjct: 163 QLWEWWERRLKDRVPFQYLISTAHWHKYVLSVGPGVLVPRPETEIFPELV-RTAISERPY 221

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF----KGVGVDISCKALEIAKSNAVTN------- 144
                  DLGTG+GA+ +A   E        +   VD+S +A+  A  NA          
Sbjct: 222 LAAAPWADLGTGSGAIAIAAADELRRVTLSVEVWAVDLSPRAVAYATFNAQLCLPSPPST 281

Query: 145 -------GVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
                  G       +Q  WF  +    G    +++NPPYI    +  L  EVR  +PR 
Sbjct: 282 GAGGSGGGGRPLVRVVQGSWFEPLRHLRGRLGGVLTNPPYIPRAQMSGLQAEVRLHEPRG 341

Query: 195 SLDGGID-GLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
           +LDGG   GL     +    +  +   GL ++E  G +Q   V  +  
Sbjct: 342 ALDGGEGPGLDSLEILCSDAAAMMLPGGLIALETAGGDQAELVAELLR 389


>gi|326382694|ref|ZP_08204385.1| modification methylase, HemK family protein [Gordonia neofelifaecis
           NRRL B-59395]
 gi|326198813|gb|EGD55996.1| modification methylase, HemK family protein [Gordonia neofelifaecis
           NRRL B-59395]
          Length = 258

 Score =  136 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 73/210 (34%), Gaps = 7/210 (3%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             L    VR    E +  ++G  +F  + L +    F PR  + LL  +A+      +  
Sbjct: 36  RQLAAWAVRRAAGEPLEHVVGRVEFAGLDLVVGPGAFVPRQRSALLAATAVDL----LAA 91

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R     ++   G   +   +         V  D    AL  A  N   + V        S
Sbjct: 92  RRSPVFVEAFCGVAPIAAYVADRCRGAYVVATDADPVALAFAAENLSADAVYRGAGL--S 149

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVS 214
                + G  DVI + PPY+    V+ L  E  D +PR +L  GG DGL     +     
Sbjct: 150 GLPEPLRGRVDVIAAVPPYVPESAVELLPHEAVDHEPRAALVGGGDDGLLRAAELLQQAR 209

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             L   G   +E+   Q      I  +  L
Sbjct: 210 SWLLDGGAVVIEMNVAQTSAASEIARAGGL 239


>gi|261403419|ref|YP_003247643.1| methylase [Methanocaldococcus vulcanius M7]
 gi|261370412|gb|ACX73161.1| methylase [Methanocaldococcus vulcanius M7]
          Length = 198

 Score =  135 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 17/193 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  +++ L S+ +EP  +T LL        L  I   +   +L++G GTG + +A  K 
Sbjct: 4   EFEGIKIKLHSEVYEPAEDTFLL--------LKNIVDVENKEVLEIGVGTGIISIACAKR 55

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               K VGVDI+  A+ +A  NA  N V      ++SD F +V G FDVI+ NPPY+ ++
Sbjct: 56  GAK-KVVGVDINPFAVNLALENAKLNNV-NNVSFIKSDLFENVRGEFDVILFNPPYLPTL 113

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVR 237
             D L   + D+    + +GG  G        + V  +L + G+   ++     + + + 
Sbjct: 114 DEDKLEGNI-DY----AFNGGKSGREVLNRFLEEVGDYLKEGGVVQILQSSLTGEEETIS 168

Query: 238 IFESRKLFLVNAF 250
           + +      V   
Sbjct: 169 MLKQLGF-DVKVV 180


>gi|13508101|ref|NP_110050.1| HemK family methylase [Mycoplasma pneumoniae M129]
 gi|2496353|sp|P75419|Y362_MYCPN RecName: Full=Uncharacterized protein MG259 homolog
 gi|1674165|gb|AAB96122.1| hemk family protein [Mycoplasma pneumoniae M129]
 gi|301633681|gb|ADK87235.1| methyltransferase, HemK family [Mycoplasma pneumoniae FH]
          Length = 453

 Score =  135 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 93/232 (40%), Gaps = 30/232 (12%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
                +     ++ D  ++  +       +    +  I G     ++        F PR 
Sbjct: 36  KDLTALWKHAKTITDFDEQGIVNALKAYFVDQLPLPYITGSVKLGSLTFKTQPGVFIPRA 95

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ++  L        L  ++ +++   +DL  G+G + +AL K  P     G D++ +AL++
Sbjct: 96  DSLAL--------LKVVKAQNLKTAVDLCCGSGTLAIALKKRFPHLNVYGSDLNPQALQL 147

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           A  NA  N V      +++D+ +++       D+I++NPPY+    +D       + +PR
Sbjct: 148 AAQNARLNMVE--VQWIEADFLAALAQVNTPIDLIITNPPYLNESQLDQT----LNHEPR 201

Query: 194 ISLDGGIDGLSHYRTIA------DGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
            SL    +G+  Y+ +         V +         +E    QK + + +F
Sbjct: 202 NSLVADGNGILFYQKLYNFLLGNRQVKQ-------VILECSPTQKKEFLALF 246


>gi|296109428|ref|YP_003616377.1| methylase [Methanocaldococcus infernus ME]
 gi|295434242|gb|ADG13413.1| methylase [Methanocaldococcus infernus ME]
          Length = 191

 Score =  135 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 17/163 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L    D +EP  ++ LL        L  I      R+LD+GTGTG   LA+       
Sbjct: 1   MKLIYDKDVYEPAEDSYLL--------LKNIVDVKGKRVLDVGTGTGI--LAIASALKGG 50

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              G+DI+ KA+E+AK NA  NGV  +     S+ F +V+G +DVI+ NPPY+ +   D 
Sbjct: 51  IVEGIDINPKAIELAKKNAKLNGV--KVKFYLSNLFENVKGKYDVILFNPPYLPTEEDDK 108

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     ++    + DGG +G        D V  +L + G+  +
Sbjct: 109 IEG-YLNY----AFDGGKEGREILDRFIDQVPNYLKEGGVVQL 146


>gi|289192702|ref|YP_003458643.1| methylase [Methanocaldococcus sp. FS406-22]
 gi|288939152|gb|ADC69907.1| methylase [Methanocaldococcus sp. FS406-22]
          Length = 197

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L L  + +EP  ++ LL        L  +       +L++G GTG + +A  K+   
Sbjct: 7   GIKLKLHPEVYEPAEDSILL--------LKNLVNVKNKEVLEIGIGTGLISIACAKKGAK 58

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K VGVDI+  A+++AK NA  N V       +SD F +V G FD+I+ NPPY+ +   D
Sbjct: 59  -KVVGVDINPYAVKLAKENAKLNNVD--VLFFESDLFENVNGKFDIILFNPPYLPTSEDD 115

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     ++    + DGG DG          +  +L K G+  +
Sbjct: 116 KIN-SYLNY----AFDGGKDGREILDRFIYNLPNYLKKGGVAQI 154


>gi|15669118|ref|NP_247923.1| protoporphyrinogen oxidase HemK [Methanocaldococcus jannaschii DSM
           2661]
 gi|3024936|sp|Q58338|Y928_METJA RecName: Full=Putative protein methyltransferase MJ0928; AltName:
           Full=M.MjaHemkP
 gi|1591599|gb|AAB98930.1| protoporphyrinogen oxidase (hemK) [Methanocaldococcus jannaschii
           DSM 2661]
          Length = 197

 Score =  135 bits (341), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L L  + +EP  ++ LL        L  +       +L++G GTG + +A  K+   
Sbjct: 7   GIKLKLHPEVYEPAEDSILL--------LKNLVDVKNKDVLEIGVGTGLISIACAKKGAK 58

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K VGVDI+  A+++AK NA  N V       +SD F +V G FDVI+ NPPY+ +   +
Sbjct: 59  -KIVGVDINPYAVKLAKENAKLNNV--NISFFESDLFENVTGKFDVILFNPPYLPTSEDE 115

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     +F    + DGG DG          +  +L K G+  +
Sbjct: 116 KID-SYLNF----AFDGGKDGREILDRFIYELPNYLKKGGVVQI 154


>gi|156842993|ref|XP_001644566.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115212|gb|EDO16708.1| hypothetical protein Kpol_1003p13 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 324

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 97/248 (39%), Gaps = 28/248 (11%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD---SALAFSLP 91
           +  +  A ++   H  +  IL  + F ++ +        PR ETE  V     ++     
Sbjct: 54  QKNIKKACIQRFHHIPLQYILKSQPFGSLNIKCQPCVLIPRWETEEWVMDLIQSIKNGKQ 113

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSN-AVTNG 145
            +E ++ + I+DL TG+G + L L +E     +       VD S  A+++   N   ++ 
Sbjct: 114 SLESKNQISIVDLCTGSGCIALLLKRELSKILNSNLNVKAVDCSDSAIDLVNRNKLESSE 173

Query: 146 VSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLD 197
                + L+ D   S            D++  NPPYI        +   V+ F+P+++L 
Sbjct: 174 DPIDIEVLKFDILQSNNIDSILSNQKIDILTCNPPYIPKSDFQRDVTKSVKLFEPKLALI 233

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFES----RKLFLVNAFKD 252
           G       Y  + +    H+N       E+G  +Q   V     +     K++ V +  D
Sbjct: 234 GDK---EFYSNLLEKWIPHINS---FVYEVGNIDQVKFVKDYISNDNTLNKIWTVGSKYD 287

Query: 253 YGGNDRVL 260
                RV+
Sbjct: 288 SNKQCRVV 295


>gi|320592224|gb|EFX04663.1| mitochondrial n-glutamine methyltransferase mtq1 [Grosmannia
           clavigera kw1407]
          Length = 341

 Score =  135 bits (340), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 74/289 (25%), Positives = 114/289 (39%), Gaps = 44/289 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           + A RD  S L  +  +  H  +   D      +R  +     R  + E +  +LG + F
Sbjct: 23  LPACRDLPSSLAELRWIRQHVAVSRADG--GQPRRAIVQRLCRRRGRGEPLQYVLGTQPF 80

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LK 117
             + L        PRPE E      LA  L R E   V  ILD+ TGTG + L L   L+
Sbjct: 81  GPLDLLCRRGVLIPRPEPEAY-SLFLADWLMRPEIGPVSTILDVCTGTGCIALLLYERLR 139

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS-------------ERFDTLQSDWF----SS 160
           +    + VG+D+S  A+ +A++N    G                R D    DW     ++
Sbjct: 140 QQQHLRVVGIDVSPAAVALARANRRRLGFPSDRDGTDSSSVSFHRADVFADDWLHLASNA 199

Query: 161 VEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRIS---L---------DGGIDGLSHYR 207
            +G  DV+V NPPY+            VR F+P+++   L         D   D    Y 
Sbjct: 200 ADGRIDVLVCNPPYVSRDGFAHETARSVRLFEPKLAQVPLATDERDEREDHHED--IFYG 257

Query: 208 TIADGVSRHLNKDGLCSVEIGY-NQKVDVVR-IFESRK--LFLVNAFKD 252
            + D   R L+   +  +E+G  +Q   VV  +   R   +  V  + D
Sbjct: 258 RLLDLAVR-LDPRSVL-LEVGGLDQAQRVVEAVLAGRGGPVADVEIWAD 304


>gi|240102561|ref|YP_002958870.1| Methylase, putative, hemK and PrmA related [Thermococcus
           gammatolerans EJ3]
 gi|239910115|gb|ACS33006.1| Methylase, putative, hemK and PrmA related [Thermococcus
           gammatolerans EJ3]
          Length = 195

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 20/166 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +Y ++L L SD +EP  +T LL ++        +E R     LD+GTGTG + L + +++
Sbjct: 6   YYGIKLELHSDVYEPAEDTFLLAET--------LEVRPGEIALDVGTGTGLIALLMARKA 57

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
            +   +GVD++ KA+E+A+ NA  NG+S   +   SD F +V G FDVI  N PY+    
Sbjct: 58  KY--VLGVDVNPKAVELARRNARLNGIS-NVEFRLSDLFENVSGRFDVITFNAPYLPGEP 114

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +          ++L GG  G          V  HLN++G   +
Sbjct: 115 EKAID---------LALVGGKTGREVIDRFIAEVPDHLNENGRVYL 151


>gi|167519989|ref|XP_001744334.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777420|gb|EDQ91037.1| predicted protein [Monosiga brevicollis MX1]
          Length = 343

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/307 (19%), Positives = 98/307 (31%), Gaps = 63/307 (20%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY--NV 63
           D            +  V   P       QR      + R  +   +   +G   F+   V
Sbjct: 33  DLRIMREHCLQCEASSVASTP----TRHQRIVWRRLLHRRAQRYPLQYTIGRWPFHACEV 88

Query: 64  RLTLSSDTFEPRPETEL---------------------------------------LVDS 84
            L +      PRPETE+                                       LVD 
Sbjct: 89  DLLVRPPVLIPRPETEVCLYNCAFSPDQLHLLPRAAANQKKGSAAACVDSSPPRQWLVDL 148

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           ALA       + +   I+D+G GTGA+ LALL   P  +   V+    A  + + NA   
Sbjct: 149 ALASL-----ESNTRHIVDVGAGTGAIGLALLSTRPGVEVTAVEPHPTAQALIRRNAQRL 203

Query: 145 GVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           G+++R   L              D+IV+N PY+ +        E+R  +   ++  G DG
Sbjct: 204 GLADRLHVLCGRLQDVALAWDQADLIVANLPYVPTTRSSTAAEEIR-HEDEGAIYAGEDG 262

Query: 203 LSHYRTIADGVSRHL-----NKDGL--CSVEIGYNQKVDVVRIFESRKLFLV---NAFKD 252
           L+    +   ++  L         L    +E     +  + R     +L  +       D
Sbjct: 263 LAQIGPLLHHINASLAQTTTKPHRLTTVLLETDIAHEQLLPRWMAQHQLSWLVHDAVLPD 322

Query: 253 YGGNDRV 259
             G  R 
Sbjct: 323 QYGRPRF 329


>gi|255718321|ref|XP_002555441.1| KLTH0G09416p [Lachancea thermotolerans]
 gi|238936825|emb|CAR25004.1| KLTH0G09416p [Lachancea thermotolerans]
          Length = 293

 Score =  133 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 92/246 (37%), Gaps = 24/246 (9%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
            + D++R       +   +H  +  +LG + F  + +T       PR ET    +     
Sbjct: 42  EVSDKKRV--RQCCMLRARHYPLQYLLGSQPFGPLDVTCQPGVLIPRWET----EEWTVS 95

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
              ++ +     I+DL TGTG + L L +  P      VD S  A ++A  N  +N +  
Sbjct: 96  LAEKLPRDMAFDIMDLCTGTGCIPLLLKQMCPKCSVFAVDRSPLAYKLATRN--SNTLQV 153

Query: 149 RFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGL 203
               ++ D        V    D+I  NPPYI            V+ F+P+++L G     
Sbjct: 154 PLKIIKKDILERSSEIVPRTVDLITCNPPYIPRTTFARETARSVKLFEPKLALLGNK--- 210

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG-----YNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             Y  + D     +++      E+G     Y     V    +  + + +    D  G  R
Sbjct: 211 EFYANLVDC---WMSRTDAFVYEVGDLSQCYYVLNRVTGDVDLSRKWRIGFRHDSCGRPR 267

Query: 259 VLLFCR 264
           ++   R
Sbjct: 268 IVYGFR 273


>gi|6324266|ref|NP_014336.1| Mtq1p [Saccharomyces cerevisiae S288c]
 gi|1730740|sp|P53944|MTQ1_YEAST RecName: Full=Mitochondrial N(5)-glutamine methyltransferase MTQ1
 gi|994824|gb|AAA99648.1| Ynl2420p [Saccharomyces cerevisiae]
 gi|1301939|emb|CAA95936.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|51012621|gb|AAT92604.1| YNL063W [Saccharomyces cerevisiae]
 gi|190409052|gb|EDV12317.1| hypothetical protein SCRG_03198 [Saccharomyces cerevisiae RM11-1a]
 gi|259149297|emb|CAY82539.1| Mtq1p [Saccharomyces cerevisiae EC1118]
 gi|285814589|tpg|DAA10483.1| TPA: Mtq1p [Saccharomyces cerevisiae S288c]
 gi|323303250|gb|EGA57048.1| Mtq1p [Saccharomyces cerevisiae FostersB]
          Length = 314

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 18/239 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S          D++  NPPYI     +  +   V+ F+PR++L G    L  Y    
Sbjct: 169 ILSSKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGE---LECY---I 222

Query: 211 DGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
           + V+  L K      EIG   Q   V R  +        + +    D  G  RV+   +
Sbjct: 223 NLVNYWLPKTDSFFYEIGDVEQFNYVERRIKEDSYLSRIWSIGLKYDSNGKARVVYGFK 281


>gi|323307444|gb|EGA60718.1| Mtq1p [Saccharomyces cerevisiae FostersO]
          Length = 314

 Score =  132 bits (333), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 18/239 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S          D++  NPPYI     +  +   V+ F+PR++L G    L  Y    
Sbjct: 169 ILSSKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGE---LECY---I 222

Query: 211 DGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
           + V+  L K      EIG   Q   V R  +        + +    D  G  RV+   +
Sbjct: 223 NLVNYWLPKTDSFFYEIGDVEQFNYVERRIKEDSYLSRIWSIGLKYDSNGKARVVYGFK 281


>gi|256273272|gb|EEU08213.1| Mtq1p [Saccharomyces cerevisiae JAY291]
          Length = 314

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 18/239 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S          D++  NPPYI     +  +   V+ F+PR++L G    L  Y    
Sbjct: 169 ILSSKASDEYPSHIDILTGNPPYIRKRDFNRNVKTSVKLFEPRLALVGE---LECY---I 222

Query: 211 DGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
           + V+  L K      EIG   Q   V R  +        + +    D  G  RV+   +
Sbjct: 223 NLVNYWLPKTDSFFYEIGDVEQFNYVERRIKEDSYLSRIWSIGLKYDSNGKARVVYGFK 281


>gi|151944471|gb|EDN62749.1| methyltransferase [Saccharomyces cerevisiae YJM789]
          Length = 314

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 18/239 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S          D++  NPPYI     +  +   V+ F+PR++L G    L  Y    
Sbjct: 169 ILSSKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGE---LECY---I 222

Query: 211 DGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
           + V+  L K      EIG   Q   V R  +        + +    D  G  RV+   +
Sbjct: 223 NLVNYWLPKTDSFFYEIGDVEQFNYVERRIKEDSYLSRIWSIGLKYDSNGKARVVYGFK 281


>gi|111023624|ref|YP_706596.1| anthranilate synthase component II and I/ aminodeoxychorismate
           synthase [Rhodococcus jostii RHA1]
 gi|110823154|gb|ABG98438.1| anthranilate synthase component II and I/ aminodeoxychorismate
           synthase [Rhodococcus jostii RHA1]
          Length = 960

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 79/207 (38%), Gaps = 15/207 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
             +   V + +      PR  T    +  LA +L  I       ++DL TG+GA+ LA+ 
Sbjct: 712 RAELGGVEVWVCPGVPAPRANT----ELVLAEALADISHVTTPVVVDLCTGSGAIALAIA 767

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVT-------NGVSERFDTLQSDWFSSVEGLFDVIV 169
                     VD    AL +A+ N            V         +  S ++G  D+++
Sbjct: 768 HARADAGVHAVDADPTALNVARRNIERQIRLGESPIVLHETAVTTPNLLSGLDGTADLVL 827

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           + PP I       L  +  ++  R +L  G DGL   R      +R L+  G   VE   
Sbjct: 828 ARPPCIPDDE--DLPSQCGEY-CRRALVSGTDGLKLARQTIVAAARLLHAGGSLVVEHRP 884

Query: 230 NQKVDVVRIFESRKLF-LVNAFKDYGG 255
           ++   V+ + E  KLF  V    D  G
Sbjct: 885 DRYTTVLALLEGNKLFGNVATHFDQAG 911


>gi|330918091|ref|XP_003298081.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1]
 gi|311328908|gb|EFQ93816.1| hypothetical protein PTT_08682 [Pyrenophora teres f. teres 0-1]
          Length = 441

 Score =  131 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 106/304 (34%), Gaps = 54/304 (17%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           + A R +       V  ++  +            +   L   +      + +  +LG   
Sbjct: 29  LDAARNELRWLREHVEHVAKARRARGK----TVARGPLLRRLVKERASGKPLQYLLGSEY 84

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ +        PR +T   V   +            +R+LDL TGTG + L    + 
Sbjct: 85  FGDLEIRCKPGVLIPRADTAASVTHLVGLLQNVPNLPPELRVLDLCTGTGCIPLLFKHQL 144

Query: 120 PFF------KGVGVDISCKALEIAKSNAVTNG------VSERFDTLQSDW---------- 157
                    + +GVDIS KA+ +A  N           V   FD L+++           
Sbjct: 145 SSARNDISLRLLGVDISLKAIRLASHNLQRLQKDGQLSVQGNFDFLRANVMTNPFVEQTE 204

Query: 158 ----------FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGID----- 201
                     ++++   +D+++SNPPYI  S         VR F+P+++L          
Sbjct: 205 GIPSVKAALNYAAMPSFWDILISNPPYISPSEFWKTTTRSVRGFEPKLALVPPPKQQQQS 264

Query: 202 ----GLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFL-VNAFK---D 252
               G   Y  + +       +  +  +EI    Q + V +  +   +F  V  ++   D
Sbjct: 265 DVERGDMFYPRLLELAREV--EAKIVLLEIADMQQALRVAQRAQKLHIFDGVEIWREQPD 322

Query: 253 YGGN 256
             G+
Sbjct: 323 ITGH 326


>gi|315231778|ref|YP_004072214.1| N5-glutamine methyltransferase [Thermococcus barophilus MP]
 gi|315184806|gb|ADT84991.1| N5-glutamine methyltransferase [Thermococcus barophilus MP]
          Length = 200

 Score =  131 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 19/168 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +  ++L L S  +EP  +T LL ++        ++ R+    LD+GTGTG + L + K+
Sbjct: 5   YYKGIKLKLHSQVYEPAEDTFLLAEN--------LKIREGDIALDVGTGTGIIALLMAKK 56

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   +GVDI+  A+E+AK NA  N +    +   SD F +VEG FD+I  N PY+   
Sbjct: 57  AKF--VLGVDINPIAVELAKENARINEIK-NVEFRVSDLFENVEGKFDIITFNSPYLPGE 113

Query: 179 IVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E++  +P  ++L GG  G          V  +L  +G+  V
Sbjct: 114 -----AGELK--EPIDLALIGGKRGREVLDRFISQVKDYLKPNGIVQV 154


>gi|323335826|gb|EGA77105.1| Mtq1p [Saccharomyces cerevisiae Vin13]
          Length = 314

 Score =  131 bits (331), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 18/239 (7%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+ + K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIXLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L S          D++  NPPYI     +  +   V+ F+PR++L G    L  Y    
Sbjct: 169 ILSSKASDEYPSHIDILTGNPPYIRKRDFNRDVKTSVKLFEPRLALVGE---LECY---I 222

Query: 211 DGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
           + V+  L K      EIG   Q   V R  +        + +    D  G  RV+   +
Sbjct: 223 NLVNYWLPKTDSFFYEIGDVEQFNYVERRIKEDSYLSRIWSIGLKYDSNGKARVVYGFK 281


>gi|258626139|ref|ZP_05720987.1| HemK protein [Vibrio mimicus VM603]
 gi|258581494|gb|EEW06395.1| HemK protein [Vibrio mimicus VM603]
          Length = 103

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +IVSNPPYIE         +VR F+P+ +L    +GL+  R I+    R L + G    E
Sbjct: 1   MIVSNPPYIEENDPHLNQGDVR-FEPKSALVAEENGLADIRYISTYAPRFLLEGGWLLFE 59

Query: 227 IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
            GY+Q   V  I        V   +DY GNDRV L  
Sbjct: 60  HGYDQGEAVRTILRELGYQSVTTEQDYAGNDRVTLGQ 96


>gi|254172001|ref|ZP_04878677.1| methylase, putative [Thermococcus sp. AM4]
 gi|214033897|gb|EEB74723.1| methylase, putative [Thermococcus sp. AM4]
          Length = 193

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 87/186 (46%), Gaps = 21/186 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +Y +R+ L    +EP  +T LL ++         + +     LD+GTGTG + L + +++
Sbjct: 4   YYGLRILLDDSVYEPAEDTFLLAETV--------DVKPGEIALDIGTGTGIIALLMARKA 55

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                +GVD++ KA+E+A+ NA+ NG+ E      SD F +VEG FDV+  N PY+    
Sbjct: 56  K--HVLGVDVNPKAIELARKNALLNGI-ENVKFRLSDLFENVEGEFDVVTFNAPYLPGEP 112

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
            + +          ++L GG  G          V  +L ++G   +         + + +
Sbjct: 113 EEPID---------LALVGGETGREVIDRFIREVPDYLTENGRVYLVQSSITGIEETLEM 163

Query: 239 FESRKL 244
           F+   L
Sbjct: 164 FQKAGL 169


>gi|124028185|ref|YP_001013505.1| methyltransferase [Hyperthermus butylicus DSM 5456]
 gi|123978879|gb|ABM81160.1| predicted Methyltransferase [Hyperthermus butylicus DSM 5456]
          Length = 198

 Score =  130 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 38/184 (20%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           V   +S++ F PR     T LL++ A+          +   +LD+G G GA+ + L K  
Sbjct: 27  VEFYVSTEVFSPREVDEGTRLLIEHAIV--------PEEGTVLDMGCGYGAIGITLAKAH 78

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P    V VD++ KA+E+A+ NA  NGV  R + LQ D +  V+G  FD I+SNPP     
Sbjct: 79  PRLHVVMVDVNPKAVELARLNARHNGVENRVEVLQGDLYEPVKGYHFDAIISNPP----- 133

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                            L     G+     +      HL   G   + +          +
Sbjct: 134 -----------------LAA---GMKIIEKLILEAPAHLKPGGSLQI-VMRKGAEKAKEL 172

Query: 239 FESR 242
            +  
Sbjct: 173 MQKA 176


>gi|242398027|ref|YP_002993451.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus
           MM 739]
 gi|242264420|gb|ACS89102.1| N5-glutamine methyltransferase, HemK family [Thermococcus sibiricus
           MM 739]
          Length = 199

 Score =  130 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 20/167 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            + ++++ L    +EP  +T LL ++ +         +D    LD+GTGTG + L + K+
Sbjct: 3   YYRDLKIKLHPHVYEPAEDTFLLAENLMI--------KDGDFALDMGTGTGIIALLMAKK 54

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   +GVD++  A+E+AK NA  NG++      QSD F +V G FD+I  N PY+   
Sbjct: 55  AKF--VLGVDVNPIAVELAKENARLNGIT-NVKFKQSDLFQNVGGKFDIITFNAPYLPGE 111

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             + +          ++L GG +G        + V  +L ++G+  +
Sbjct: 112 PEELID---------LALVGGREGREVLDRFIEEVDGYLTENGIIQI 149


>gi|304315450|ref|YP_003850597.1| methyltransferase [Methanothermobacter marburgensis str. Marburg]
 gi|302588909|gb|ADL59284.1| predicted methyltransferase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 228

 Score =  130 bits (327), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 19/167 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + ++++    D +EP  +T LL D+        +E  +  R+L++GTGTG V +   K S
Sbjct: 4   YGDLKIETCRDVYEPAEDTFLLADN--------LEVGEGERVLEIGTGTGLVAI---KAS 52

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                   DI+  A+E A+ NAV NG   R   LQ D F  V G  FDVI+ N PY+   
Sbjct: 53  EKADVTATDINPAAVECARKNAVLNGSGLRV--LQGDLFDPVRGEKFDVILFNTPYLPVG 110

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D     +      ++ +GG DG        D V+ HL   G   +
Sbjct: 111 EEDITEGSI-----DLAWNGGPDGRRVIDRFLDDVAEHLKPGGRIQL 152


>gi|159905280|ref|YP_001548942.1| methylase [Methanococcus maripaludis C6]
 gi|159886773|gb|ABX01710.1| methylase [Methanococcus maripaludis C6]
          Length = 202

 Score =  129 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 16/188 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   +R+      + P  ++ELL+++ +              +LD+GTG+G   +    +
Sbjct: 6   EILGIRIKTHPKVYVPAEDSELLIENLVDV--------KNKSVLDVGTGSGIQAIN-AVK 56

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
               K +G+DI+  A+E AK NA  N +  ++     SD F +++  FDVI+ N PY+ +
Sbjct: 57  QGASKVIGIDINPYAVECAKINAELNEIDSKKLSFKTSDLFRNIDEKFDVILFNAPYLPT 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVV 236
              + L     ++    + DGG DG        D V+ +LN++G    ++    +    +
Sbjct: 117 SDEEKLEK-YLNY----AFDGGKDGREVLDKFLDDVANYLNENGTVQILQSSLTRGDKTI 171

Query: 237 RIFESRKL 244
              E+   
Sbjct: 172 EKMENLGF 179


>gi|218459800|ref|ZP_03499891.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli Kim 5]
          Length = 141

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/120 (40%), Positives = 72/120 (60%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           +    D+   +  +   SS +++      L   Q   ++ A+ R L HE +HRILG R+F
Sbjct: 22  VDPATDARLLVAGLLKQSSTELLTRSAEKLSPDQLVMISKAMERRLDHEPVHRILGEREF 81

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + L LS++T EPRP+TE+LVD+ LA+     +    + ILD+GTGTGA+CLALL E P
Sbjct: 82  YGLPLQLSAETLEPRPDTEILVDTVLAYLKDLAKVHGHLHILDIGTGTGAICLALLSECP 141


>gi|18978045|ref|NP_579402.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638]
 gi|18893832|gb|AAL81797.1| protoporphyrinogen oxidase [Pyrococcus furiosus DSM 3638]
          Length = 201

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 15/193 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  +++ +S + +EP  ++ LL +  L       E RD   +LD+GTG+G + L   K+
Sbjct: 4   EYMGLKIEISEEVYEPAEDSFLLAEVLLK------EVRDEDIVLDMGTGSGILALLAAKK 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   VGVDI+ +A++IA  NAV N V      ++SD F ++ G F +IV NPPY+   
Sbjct: 58  AKF--VVGVDINERAVDIAWKNAVNNDVK-NVIFVKSDLFENIRGRFSLIVFNPPYLPGE 114

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
             +            ++L GG  G       A  V   L   G   +      K++V ++
Sbjct: 115 DEEIRDP------IDLALIGGKTGGEVIERFAKHVKDFLLPGGRVLLLYSSLTKINVRKL 168

Query: 239 FESRKLFLVNAFK 251
           F+          K
Sbjct: 169 FDELGFKTAIVAK 181


>gi|57641608|ref|YP_184086.1| N5-glutamine methyltransferase, HemK family [Thermococcus
           kodakarensis KOD1]
 gi|57159932|dbj|BAD85862.1| N5-glutamine methyltransferase, HemK family [Thermococcus
           kodakarensis KOD1]
          Length = 194

 Score =  127 bits (320), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 20/167 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  +R+ L    +EP  +T LL ++        +  +     LD+GTGTG + L L ++
Sbjct: 4   EYQGLRIKLHPQVYEPAEDTFLLAEN--------LAVKVGDIALDMGTGTGIIALLLARK 55

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + +   +GVDI+  A+E+A+ NA  NG+    +   SD F +V G FDVI  N PY+   
Sbjct: 56  ARW--VLGVDINPLAVELARENARINGI-INVEFRLSDLFENVSGEFDVITFNAPYLPGE 112

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             + +          ++L GG  G        D V  +L   G+  +
Sbjct: 113 PEEPID---------LALVGGETGREVLDRFIDEVPCYLKPGGVVQI 150


>gi|189195984|ref|XP_001934330.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980209|gb|EDU46835.1| hypothetical protein PTRG_03997 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 438

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/296 (17%), Positives = 102/296 (34%), Gaps = 51/296 (17%)

Query: 1   MQALR-DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD 59
           + A R +       V  ++  +            +   L   +      + +  +LG   
Sbjct: 29  LDAARNELRWLREHVEHVAKARRARGK----TVAKGPLLHRLVKERASGKPLQYLLGSEY 84

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ +        PR +T   V                +R+LDL TGTG + L    + 
Sbjct: 85  FGDLEIRCKPGVLIPRADTAASVTHLAGLLQNAPNLPPELRVLDLCTGTGCIPLLFKYQL 144

Query: 120 PFF------KGVGVDISCKALEIAKSNAVT------NGVSERFDTLQSDW---------- 157
                    + +G+DIS KA+ +A  N               FD L+++           
Sbjct: 145 SSARNDISLRLLGIDISPKAIGLAAKNLRRLQKHGQLNTQGNFDFLRANVMINPFVEQTE 204

Query: 158 ----------FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDG-------- 198
                     ++ +   +D+++SNPPYI  S         VR F+P+++L          
Sbjct: 205 GIPSVKAALNYALMPSFWDILISNPPYISPSEFWKTTTRSVRGFEPKLALVPPLRQQQQT 264

Query: 199 GID-GLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFL-VNAFK 251
            +D G   Y  + +       +  +  +EI    Q + V +  +   +F  V  ++
Sbjct: 265 DVDRGDMFYPRLLELAREV--EAKVVLLEIADMQQALRVAQHAQKLHIFDGVEIWR 318


>gi|169596751|ref|XP_001791799.1| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15]
 gi|160707366|gb|EAT90794.2| hypothetical protein SNOG_01145 [Phaeosphaeria nodorum SN15]
          Length = 830

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 49/292 (16%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +       V  ++  +     D +    +   L   +      + +   LG   F +
Sbjct: 32  AQGELRWLREHVERVAQAR-RARGDEL---AKGALLRQLVSERASGKPLQYTLGTEYFGD 87

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +        PR +T   +   +            +R+LDL TGTG + L    E    
Sbjct: 88  LEIRCRPGVLIPRQDTAASITHLVHLLRDAPSLPPELRLLDLCTGTGCIPLLFRHELYSA 147

Query: 123 ------KGVGVDISCKALEIAKSN-----AVTNGV-SERFDTLQSD-WFSSVEGL----- 164
                 + + VD+S +AL +A+ N     A   G   +R   L++D              
Sbjct: 148 RQDVHLRALAVDVSEEALALARHNLRSVDASRAGTKQDRIHLLKADVLLDPFADQVTGAP 207

Query: 165 --------------FDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISL--------DGGID 201
                         +D+++SNPPYI  S         VR ++P+++L        D    
Sbjct: 208 SLKAAMNDYRQPPFWDILISNPPYISPSDYWKTTTRSVRGYEPKLALVPPQSPHIDDIQT 267

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFL-VNAFK 251
             + Y  + D       +  +  +E+    Q   V +   + ++F  +  ++
Sbjct: 268 ADAFYSRLLDIARDV--EAKIVLLEVADLEQAHRVAQHARALEIFDGIEIWR 317


>gi|15679329|ref|NP_276446.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622435|gb|AAB85807.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 196

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 19/167 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  +++    + +EP  +T LL D+        ++ R+  R+L++GTGTG V +   + S
Sbjct: 6   YGEIKIKTCENVYEPAEDTFLLADN--------LDVREGDRVLEIGTGTGLVAI---RAS 54

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                   D++  A++  + NA+ NGV  R   LQ D F  VEG  FDVI+ N PY+ + 
Sbjct: 55  EKGDVTATDVNPAAVKCTQENAIINGVELRV--LQGDLFDPVEGEKFDVILFNTPYLPAT 112

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D    +V D    ++ +GG DG        D V  HL   G   +
Sbjct: 113 G-DDATGDVLD----LAWNGGPDGRMVIDRFLDEVPAHLKPGGRVQL 154


>gi|212225058|ref|YP_002308294.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1]
 gi|212010015|gb|ACJ17397.1| N5-glutamine methyltransferase [Thermococcus onnurineus NA1]
          Length = 194

 Score =  126 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 20/167 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +  ++L L    +EP  +T LL ++        +  +     LD+GTGTG + L + ++
Sbjct: 4   YYKGLKLKLHPQVYEPAEDTFLLAEN--------LAVKHGDVALDMGTGTGIIALLMARK 55

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + +   +GVD++  A+++A+ NA  NG+ E  + +QS+ F  V G FDVI  N PY+   
Sbjct: 56  AEY--VLGVDVNPLAIKLARENARLNGI-ENVEFIQSNLFEGVNGEFDVITFNAPYLPGE 112

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             + +          ++L GG  G        D V+ +L   G+  +
Sbjct: 113 PEEPID---------LALVGGETGREVLDRFIDEVADYLKPGGIVQI 150


>gi|270659705|ref|ZP_06222366.1| putative adenine-specific methylase [Haemophilus influenzae HK1212]
 gi|270316958|gb|EFA28641.1| putative adenine-specific methylase [Haemophilus influenzae HK1212]
          Length = 120

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  +     F      +   T  PR     L+       + +    +   ILDL TG+G 
Sbjct: 1   MAYLTNSAWFCGHEFYVDERTIIPRSPISALIQDRFEDLISQ----EPNHILDLCTGSGC 56

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + +A     P  +   +D+S  AL +A+ N   + +  R   +QS+ F ++ G  +D+IV
Sbjct: 57  IAIACAYAFPNAEVDAIDLSVDALNVAEINISRHQLEHRVFPIQSNLFENILGQKYDLIV 116

Query: 170 SNPP 173
           +NPP
Sbjct: 117 TNPP 120


>gi|150399814|ref|YP_001323581.1| putative methylase [Methanococcus vannielii SB]
 gi|150012517|gb|ABR54969.1| putative methylase [Methanococcus vannielii SB]
          Length = 202

 Score =  125 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 16/190 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++      + P  ++ELL+++ +              +LD+GTG+G   +    ++  
Sbjct: 9   DVKIKTHPKVYVPAEDSELLIENLVDV--------KNKTVLDVGTGSGIQAIN-ALKNGA 59

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               G+DI+  A+E AK+NA  N    ++     SD F ++ G FDVI+ N PY+ +   
Sbjct: 60  LMVYGIDINPYAIECAKNNAEINKCDLKKISFKTSDLFKNISGKFDVILFNAPYLPTSND 119

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIF 239
           + L     ++    + DGG DG         GVS HLN++G+   ++         + + 
Sbjct: 120 EKLEK-YLNY----AFDGGKDGREVIDNFLLGVSDHLNENGVVQILQSSLTDGKKTISLM 174

Query: 240 ESRKLFLVNA 249
           E         
Sbjct: 175 EKLGFKAEQT 184


>gi|7476090|pir||T09985 protoporphyrinogen oxidase homolog - Mycobacterium leprae
 gi|699335|gb|AAA63096.1| hemK [Mycobacterium leprae]
          Length = 191

 Score =  125 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 8/171 (4%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  D+      + G    ++ +  D+   +      ++A+    +   +  ++G   F  
Sbjct: 24  ARCDAEQLAAHLAGTDRGRLAL-LDTP-GEEFFRRYSDAVAARSRRVPLQHLIGTVSFGP 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V L +  D F PRPETE ++   +A  LP     +   I+D  TG+GA+ +AL    P  
Sbjct: 82  VVLHVGPDVFIPRPETEAILAWVMAQRLP-----ERPVIVDACTGSGALAVALAHHRPAA 136

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNP 172
           + +G+D S  AL+ A+ NA    V   R D         ++G  D+ V+ P
Sbjct: 137 RVIGIDDSDSALDYARRNAEGTAVECVRADVTTPALLPELDGCVDLFVAQP 187


>gi|321310998|ref|YP_004193327.1| hypothetical protein HF1_14800 [Mycoplasma haemofelis str. Langford
           1]
 gi|319802842|emb|CBY93488.1| conserved hypothetical protein [Mycoplasma haemofelis str. Langford
           1]
          Length = 276

 Score =  125 bits (315), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 9/217 (4%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I RI     F+     L  D F PR ETEL+V+  L   +           +DL  GTG 
Sbjct: 66  IERICKKVFFHKHEFILHDDVFCPRNETELIVEY-LNQEIKEDPALKKSNYVDLCAGTGV 124

Query: 111 VCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           + +++  ++  F  K   VDIS +A++  K N     +  +   ++ DW+  + E   DV
Sbjct: 125 IGISIALQNEGFFKKIALVDISEEAIKNIKENCAKYNL--KASVVKQDWYEYLQENGADV 182

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I +N PY+     D +   + + +P  +L    DG  HY  +   + R+     L  +E 
Sbjct: 183 ITANFPYVSKE--DDMDEHIMESEPDWALFADNDGWEHYDKVLKFIDRN-KAWKLIVLEC 239

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               +     I  +          D  G  RV+   R
Sbjct: 240 SAYHEKKWKSIKNTYPNVKWKFLYDLNGKLRVVSLKR 276


>gi|45357617|ref|NP_987174.1| hypothetical protein MMP0054 [Methanococcus maripaludis S2]
 gi|45047177|emb|CAF29610.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 202

 Score =  124 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++      + P  ++ELL+++ +              +LD+GTG+G   +    +   
Sbjct: 9   GIKIKTHPKVYVPAEDSELLIENLVDV--------KNKTVLDVGTGSGIQAIN-AVKQGA 59

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K +G+DI+  A++ AK N+  N +  ++      D F +++  FDVI+ N PY+ +   
Sbjct: 60  LKVIGIDINPYAVDCAKINSELNEIDSKKLFFKTGDLFKNIDEKFDVILFNAPYLPTSDE 119

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           + L     ++    + DGG DG        D V+ +L KDG+  +
Sbjct: 120 EKLEK-YLNY----AFDGGKDGREVLDKFLDEVANYLKKDGIIQI 159


>gi|14520648|ref|NP_126123.1| hypothetical protein PAB0284 [Pyrococcus abyssi GE5]
 gi|5457864|emb|CAB49354.1| Predicted rRNA or tRNA methylase [Pyrococcus abyssi GE5]
          Length = 197

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 22/203 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +  +R+ +    +EP  +T LL ++ L       E R+   +LD+GTG+G + L   K+
Sbjct: 4   HYNGLRIEVEESVYEPAEDTFLLAEALLE------EVREDDIVLDVGTGSGILALLAAKK 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   VG+DI+ KA+++A  NA  NG+      + SD F ++ G F +I+ NPPY+   
Sbjct: 58  AKF--VVGLDINEKAIDLAWRNAQLNGIK-NVVFVVSDLFRNLRGKFTLILFNPPYLPGD 114

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            V          +  ++L GG  G          V  +L   G   +       ++V   
Sbjct: 115 DVKD--------EIDLALIGGKTGSEVILKFLSDVEDYLLPGGRILIVYSSLTGLNVREA 166

Query: 239 FESRKLFLVNAFKDYGGNDRVLL 261
           FE +        K     +R   
Sbjct: 167 FEEKGFST-RIVK----KERFFF 184


>gi|254576907|ref|XP_002494440.1| ZYRO0A01518p [Zygosaccharomyces rouxii]
 gi|238937329|emb|CAR25507.1| ZYRO0A01518p [Zygosaccharomyces rouxii]
          Length = 303

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 53/240 (22%), Positives = 87/240 (36%), Gaps = 18/240 (7%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIE 94
             +  A ++  K   +  ILG + F  + +        PR ETE  V + +         
Sbjct: 47  KQVRQACLQRFKLVPLQYILGNQPFGELDIVCRPGVLIPRWETEEWVCELSERLLGSMGP 106

Query: 95  KRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                 I DL  GTG V L L +   P      VD++  AL +   NA  N + ER   +
Sbjct: 107 LNSPFPIWDLCCGTGCVGLLLQRRLGPGCSLTAVDVTDAALGLCVENAHRNDL-ERPRLI 165

Query: 154 QSDWFSS---VEGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            +D  +     +    ++  NPPYI            V+  +P+++L G    L  Y ++
Sbjct: 166 ATDVLTKKIVPDSRISLLTCNPPYIPKNQFAADTSPSVKRHEPQLALIGD---LEFYSSL 222

Query: 210 ADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL----FLVNAFKDYGGNDRVLLFCR 264
            +    H +       E+G   Q   V+            + V    D  G  RV+   +
Sbjct: 223 VNTWIHHTDS---FVYEVGDRRQIEYVMHGIRDDPRLQLEWCVGYRLDSSGCPRVVYGYK 279


>gi|296810328|ref|XP_002845502.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae
           CBS 113480]
 gi|238842890|gb|EEQ32552.1| S-adenosylmethionine-dependent methyltransferase [Arthroderma otae
           CBS 113480]
          Length = 366

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 77/201 (38%), Gaps = 36/201 (17%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP- 91
           + R  L + + +    + +  ILG + F ++ +        PRP+TE          L  
Sbjct: 55  KWRQRLRSLVRQRAAGKPLQYILGDQPFGDLEILCKEGVLIPRPDTESYTTRITQHLLAE 114

Query: 92  -RIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTN-- 144
            R   R  VRI+D+ TGTG + L     L    P    +GVDIS  AL +AK N   N  
Sbjct: 115 HRRYPRQSVRIIDICTGTGCIPLLLHSLLAPSIPALSVIGVDISPTALSLAKKNLEHNIE 174

Query: 145 ------GVSERFDTLQSDWFSS--------------------VEGLFDVIVSNPPYIESV 178
                    +    +Q+D  +                         +D+++SNPPYI   
Sbjct: 175 NGNLLSRARDEVHFVQADILTPRSLDPDGSELGMLLSRLQQEHRDGWDLLISNPPYISPK 234

Query: 179 IVD--CLGLEVRDFDPRISLD 197
                     VR ++P ++L 
Sbjct: 235 EFANGTTKRSVRLYEPTLALV 255


>gi|150402974|ref|YP_001330268.1| putative methylase [Methanococcus maripaludis C7]
 gi|150034004|gb|ABR66117.1| putative methylase [Methanococcus maripaludis C7]
          Length = 202

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 16/185 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++      + P  ++ELL+++ +              +LD+GTG+G   +    +   
Sbjct: 9   GIKIKTHPKVYVPAEDSELLIENLVDV--------KNKSVLDVGTGSGIQAIN-AVKQGA 59

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K +G+DI+  A++ AK N+  N ++ E+     SD F +++  FDVI+ N PY+ +   
Sbjct: 60  VKVIGIDINPYAVDCAKINSELNEINPEKLSFKTSDLFKNIDEKFDVILFNAPYLPTSDE 119

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIF 239
           + L     ++    + DGG DG        D V+ +LN++G    ++         +   
Sbjct: 120 EKLEK-YLNY----AFDGGTDGREVLDKFLDEVTNYLNENGTVQILQSSLTNGDKTIAKM 174

Query: 240 ESRKL 244
           E    
Sbjct: 175 EKLGF 179


>gi|147919486|ref|YP_686774.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured
           methanogenic archaeon RC-I]
 gi|110622170|emb|CAJ37448.1| protoporphyrinogen oxidase-related protein (HemK-like) [uncultured
           methanogenic archaeon RC-I]
          Length = 193

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 24/194 (12%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R + +    L    ++P  ++ LLV++AL         R   ++L++GTG+G V      
Sbjct: 4   RIYRDKEFELLEGVYDPGDDSFLLVEAALKDI------RAGEKVLEVGTGSGVVSF---- 53

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
              F K V   I+     IA  NA  NG     + +++D FS + G FDVI+ NPPY+ +
Sbjct: 54  ---FVKDVTRVIATDINPIACQNARLNG----VEVVRTDLFSGICGQFDVIIFNPPYLPT 106

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVV 236
              + L   +       + DGG DG    R    GV R L   G              V 
Sbjct: 107 SEDEKLDTWL-----NRAFDGGPDGRDVIRQFLAGVKRILPIGGRVLTVFSSLTDIDAVA 161

Query: 237 RIFESRKLFLVNAF 250
            ++       V   
Sbjct: 162 ELYRQHGFS-VETV 174


>gi|50291423|ref|XP_448144.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527455|emb|CAG61095.1| unnamed protein product [Candida glabrata]
          Length = 340

 Score =  123 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 33/268 (12%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           IV  ++V  +     L        +   +  +LG + F    L        PR ETE   
Sbjct: 61  IVQGNAVPGNTAARRLLRGCAARFRGVPLQYVLGSQPFGAAELVCRPGVLIPRWETEEWA 120

Query: 83  DSALAFSLPRIEKRDV------VRILDLGTGTGAVCLA----LLKESPFFKGVGVDISCK 132
              LA ++ R   +        + ++DL TGTG V +     L +     K   VD+S +
Sbjct: 121 LK-LARAIARYSSQQPLAQPLKLTLVDLCTGTGCVPIGIHDELARAPSLIKYTAVDVSPQ 179

Query: 133 ALEIAKSNAVTNGVSE-RFDTLQSDWFSSV--------------EGLFDVIVSNPPYIES 177
           A+++ + N     +   + D L+ D  + +                  D+++ NPPYI  
Sbjct: 180 AIDLCRLNVGRRAIEVKQVDVLRQDSPADIVGGLGPGRGLGLGRGPAIDILLCNPPYIPR 239

Query: 178 VIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     VR ++PR++L         Y+ + D  S+H N       EIG + + + V
Sbjct: 240 KAFTRTTARSVRLYEPRLALIADK---EFYKNLVDVWSQHTNS---FVYEIGDSSQYEYV 293

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +      ++ V    D  G  R +   R
Sbjct: 294 KQALDPSVWSVGLHIDSNGCPRAVYGYR 321


>gi|254820813|ref|ZP_05225814.1| methylase, putative [Mycobacterium intracellulare ATCC 13950]
          Length = 229

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 9/161 (5%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + + + P+ ++ LLVD      L         R+LDL TG+G V +A   E         
Sbjct: 13  TQNVYRPQEDSRLLVDVMHETGLI-----PGRRVLDLCTGSGFVAIA-AAEMGCADTTAF 66

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DI  +A+  A+ NA   G+    D  +  W ++VE   FDV+VSNPPY+ +     L   
Sbjct: 67  DICPQAVRCARENAAAAGID--IDVREGSWITAVECAPFDVVVSNPPYVPTPPGAELEEI 124

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +  P  + + G DG      + +   + L   G   +  
Sbjct: 125 CPEAGPSWAWNAGRDGRLILDPLCESAPKLLRDGGSLLMVH 165


>gi|322704989|gb|EFY96578.1| hypothetical protein MAA_07861 [Metarhizium anisopliae ARSEF 23]
          Length = 356

 Score =  123 bits (309), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 65/248 (26%), Positives = 97/248 (39%), Gaps = 45/248 (18%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPE----TELLVDSALAFSL---PRIEKRDVVR 100
              +  ILG + F  + +   S    PRPE    T  LVD      L           + 
Sbjct: 67  GVPLQYILGSQPFGPLDIKCRSGVLIPRPETEAYTYHLVDLIKTGELLGSKSSNDNAELS 126

Query: 101 ILDLGTGTGAVCLALLK----ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF------ 150
           I+DL TGTG + L L           +  GVDIS +A+ +AK N   N            
Sbjct: 127 IVDLCTGTGCIPLLLYTLLQPSFRRLRVRGVDISPQAVGLAKLNVRHNSKLGNIAASQPG 186

Query: 151 ---DTLQSDWFSSVE------GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISLD 197
              D L+ D F   +         D++VSNPPY+     D     LG  VR ++PR++L 
Sbjct: 187 QKLDILRGDIFKDQDIALVAQTPCDILVSNPPYVSQRAWDFGQEGLGYSVRKYEPRLALV 246

Query: 198 GGID-----GLS----HYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVV-RIFESR--KL 244
              D     G       Y  + D V   L    +  +E+G   Q   ++ R+F+ R  + 
Sbjct: 247 PNHDLPVPAGWLHEDVFYSRLLDIV-MLLKPS-VALLELGEESQARRILGRLFQHRVAEF 304

Query: 245 FLVNAFKD 252
            +   ++D
Sbjct: 305 VMAEVWRD 312


>gi|731536|sp|P39200|YFCB_VIBAN RecName: Full=Uncharacterized adenine-specific methylase yfcB
          Length = 148

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 6/138 (4%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DIS  AL++A+ N   +G+ ++   ++SD F  +    +D+IVSNPPY++   ++ L  E
Sbjct: 1   DISTDALQVAEQNIQDHGMEQQVFPIRSDLFRDLPKEKYDLIVSNPPYVDQEDMNSLPKE 60

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            +  +P + L  G DGL   R I    + +L  +G+   E+G N  V ++  ++      
Sbjct: 61  FK-HEPELGLAAGTDGLKLVRRILANAAGYLTDNGILICEVG-NSMVHMMNQYDHIPFTW 118

Query: 247 VNAFKDYGGNDRVLLFCR 264
           +      GG+  V +  R
Sbjct: 119 LEFEN--GGHG-VFMLTR 133


>gi|118463025|ref|YP_879711.1| methylase, putative [Mycobacterium avium 104]
 gi|118164312|gb|ABK65209.1| methylase, putative [Mycobacterium avium 104]
          Length = 229

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 9/160 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            + ++P+ ++ LLVD      L         R+LDL TG+G V +A   E         D
Sbjct: 14  HNVYQPQEDSRLLVDVMHGTGLI-----PGRRVLDLCTGSGFVAIA-AAEMGCASVTAFD 67

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
               A+  A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +     L    
Sbjct: 68  KCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDELG 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + + G DG      + +   + L   G   +  
Sbjct: 126 PVTGPSWAWNAGRDGRLVLDPLCESAPKLLRDGGSLLLVH 165


>gi|41406471|ref|NP_959307.1| hypothetical protein MAP0373 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41394820|gb|AAS02690.1| hypothetical protein MAP_0373 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 229

 Score =  122 bits (308), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 9/160 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            + ++P+ ++ LLVD      L         R+LDL TG+G V +A   E         D
Sbjct: 14  HNVYQPQEDSRLLVDVMHGTGLI-----PGRRVLDLCTGSGFVAIA-AAEMGCASVTAFD 67

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
               A+  A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +     L    
Sbjct: 68  KCPHAVRCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDELG 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + + G DG      + +   + L   G   +  
Sbjct: 126 PVTGPSWAWNAGRDGRLVLDPLCESAPKLLRDGGSLLLVH 165


>gi|213024819|ref|ZP_03339266.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 120

 Score =  122 bits (306), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VDIS  AL +A+ N   +G+      ++SD F  +    +D+IV+NPPY+++  + 
Sbjct: 1   EVDAVDISPDALAVAEHNIEEHGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMS 60

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L  E R  +P + L  G DGL   R I      +L+ DG+   E+G      +V + E 
Sbjct: 61  DLPNEYR-HEPELGLASGTDGLKLTRRILGNAPDYLSDDGVLICEVGN----SMVHLMEQ 115

Query: 242 RK 243
             
Sbjct: 116 YP 117


>gi|254773433|ref|ZP_05214949.1| methylase, putative [Mycobacterium avium subsp. avium ATCC 25291]
          Length = 220

 Score =  121 bits (305), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            + ++P+ ++ LLVD      L         R+LDL TG+G V +A   E         D
Sbjct: 5   HNVYQPQEDSRLLVDVMHGTGLI-----PGRRVLDLCTGSGFVAIA-AAEMGCASVTAFD 58

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
               A++ A+ NA   GV    D  +  W ++V+   FDV+VSNPPY+ +     L    
Sbjct: 59  KCPHAVQCARENAALAGVD--VDVREGSWLAAVDCAPFDVVVSNPPYVPTPPGAVLDELG 116

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + + G DG      + +   + L   G   +  
Sbjct: 117 PVTGPSWAWNAGRDGRLVLDPLCESAPKLLRDGGSLLLVH 156


>gi|255931547|ref|XP_002557330.1| Pc12g04610 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581949|emb|CAP80088.1| Pc12g04610 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 398

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 61/308 (19%), Positives = 94/308 (30%), Gaps = 81/308 (26%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           R  L +      +   +  ILG + F ++ +        PRPETE        LV     
Sbjct: 90  RSRLRSMCQMRSRGYPLQYILGDQPFGHLEILCRRGVLIPRPETESYTYQAAKLVRQMAR 149

Query: 88  FSLPRIEKRD---VVRILDLGTGTGAVC----LALLKESPFFKGVGVDISCKALEIAKSN 140
               + E  +    +R++DL TGTG +       L       + V VDIS  AL +A+ N
Sbjct: 150 GCNDKSESPNQARPLRVIDLCTGTGCISLLLHALLAPHFQKLEIVAVDISPTALGLAQEN 209

Query: 141 AVTNGVSER--------FDTLQSDWFSS-----------------------------VEG 163
              N    +             +D                                  E 
Sbjct: 210 LKHNLQMGQLASSAGTDIHFHCADVLRYGCNNSVPSIESILQIQLPNFGASDTSPPVQES 269

Query: 164 LFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDG---------LSHYRTIADG 212
             D+++SNPPYI             VR F+P+++L     G            Y  I   
Sbjct: 270 GCDLLISNPPYISQTEFRNGTTARSVRRFEPKLALVPPHSGSGVEDCMPEDIFYHRILTL 329

Query: 213 VSRHLNKDGLCSVEIGYN-QKVDVVRIF-----ESRKLFLVNAF----KDYGGND----- 257
             +   K  L  +E G + Q   VV +           F    +    +D   N      
Sbjct: 330 AFKLRAK--LTVLECGDSHQASRVVALHNRLASTESGQFSAEVWPSRERDLAENGFHATD 387

Query: 258 --RVLLFC 263
             R ++  
Sbjct: 388 GSRCVIIQ 395


>gi|256810548|ref|YP_003127917.1| methylase [Methanocaldococcus fervens AG86]
 gi|256793748|gb|ACV24417.1| methylase [Methanocaldococcus fervens AG86]
          Length = 199

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L L  + +EP  ++ LL        L  +       +L++G GTG + +A  K+   
Sbjct: 7   GIKLKLHPEVYEPAEDSILL--------LKNLVDVKGKEVLEIGVGTGLISIACAKKGAK 58

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K VGVDI+  A+++A+ NA  N ++      ++SD F +V G FDVI+ NPPY+ +   
Sbjct: 59  -KVVGVDINPYAVKLAEENAKLNNLNNADISFIRSDLFENVSGTFDVILFNPPYLPTSE- 116

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D L     ++    + DGG DG        D +  +L K G+  +
Sbjct: 117 DDLIDSYINY----AFDGGKDGREILDRFIDNLPNYLKKGGVVQI 157


>gi|332140923|ref|YP_004426661.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550945|gb|AEA97663.1| peptide release factor-glutamine N5-methyltransferase(HemK)
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 162

 Score =  119 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L  + G S   +   PD  L   Q     +AI R    E +  I+G RDF+ + L
Sbjct: 23  DAKVMLADILGKSQTYLFTWPDKTLTPSQIAEFEDAIERRKAGEPVAYIIGKRDFWTLSL 82

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRI----EKRDVVRILDLGT 106
             SS T  PRP+TE+LV+  + ++   +      +  + I DLGT
Sbjct: 83  FTSSHTLIPRPDTEVLVEHVINWATGNVSANTPNKPPLSICDLGT 127


>gi|52548592|gb|AAU82441.1| HemK related protein [uncultured archaeon GZfos17F1]
          Length = 205

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            +  +  ++ L+   +EP  ++ LL+D+AL      +     +RI+++GTG+G V  A++
Sbjct: 4   HQSHHGYQIHLTGAVYEPAEDSYLLIDAALNEI---VGSNQRLRIIEIGTGSGIVTAAMM 60

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +++P  +    DIS  A+  AK+N        R   +++D FS + G FD+IV N PY+ 
Sbjct: 61  RDAPEHRYAATDISPHAVACAKAN--------RVPVVRADLFSGIRGRFDLIVFNAPYLP 112

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDV 235
           +   +C+     D+    + +GG +G              L   G   +          V
Sbjct: 113 TAPDECVDGW-LDY----AWNGGDNGRVVIDRFFVQAPAFLADHGSILLLFSSLTGIEAV 167

Query: 236 VRIFESRKL 244
                S  L
Sbjct: 168 RERMASAGL 176


>gi|12045114|ref|NP_072925.1| HemK family modification methylase [Mycoplasma genitalium G37]
 gi|255660258|ref|ZP_05405667.1| HemK family modification methylase [Mycoplasma genitalium G37]
 gi|2496352|sp|Q49404|Y259_MYCGE RecName: Full=Uncharacterized protein MG259
 gi|1045951|gb|AAC71479.1| modification methylase, HemK family [Mycoplasma genitalium G37]
 gi|166078831|gb|ABY79449.1| modification methylase, HemK family [synthetic Mycoplasma
           genitalium JCVI-1.0]
          Length = 456

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 31/241 (12%)

Query: 10  FLCR-------VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
            L         +  L   ++++   S L D+ +  L       ++   +  +LG      
Sbjct: 27  ILEHYGFQFKTIDKLWKSKLLI--TSELTDKIKQQLK---CYFIEKIPLPYLLGTIQLRK 81

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +        F PR ++  L+ S           + +   LDL  G+G + +AL K+    
Sbjct: 82  LTFKTKKGVFIPRIDSLALIASV--------NLKKIKTALDLCCGSGTLAIALKKKCDTL 133

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              G DI  +AL++A+ NA+ N VS    +    D F+ ++   D+IV+NPPY++   ++
Sbjct: 134 DVYGSDIDIQALKLAQQNALINNVSINWIEADWFDCFNKIKTPIDLIVTNPPYLKKTQLN 193

Query: 182 CLGLEVRDFDPRISL-DGGIDGLSHYRTIADGVSRHLNKDGL--CSVEIGYNQKVDVVRI 238
                  +++P+ SL     +    Y+ + +     L K  +     E    QK  ++ +
Sbjct: 194 KT----LNYEPKHSLVFQNKNSYFAYKQLFNL---LLTKRSIKQLIFECSLFQKERLLNL 246

Query: 239 F 239
           F
Sbjct: 247 F 247


>gi|134046649|ref|YP_001098134.1| putative methylase [Methanococcus maripaludis C5]
 gi|132664274|gb|ABO35920.1| putative methylase [Methanococcus maripaludis C5]
          Length = 202

 Score =  119 bits (298), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 86/185 (46%), Gaps = 16/185 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++    + + P  ++ELL+++ +              +LD+GTG+G   +  +K+   
Sbjct: 9   GIKIKTHPNVYVPAEDSELLIENLVDV--------KNKSVLDVGTGSGIQAINAVKKGA- 59

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K +G+DI+  A+E AK+N+ +N ++ ++      D F +++  FDVI+ N PY+ +   
Sbjct: 60  SKVIGIDINPYAVECAKTNSKSNEINSKKLSFKTGDLFKNIDEKFDVILFNAPYLPTSDE 119

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIF 239
           + L     ++    + DGG +G        D V  HLN+ G    ++         +   
Sbjct: 120 EKLEK-YLNY----AFDGGKNGREVLDKFLDEVINHLNEKGTVQILQSSLTDGNKTIEKM 174

Query: 240 ESRKL 244
           E+   
Sbjct: 175 ENLGF 179


>gi|14591489|ref|NP_143569.1| hypothetical protein PH1731 [Pyrococcus horikoshii OT3]
 gi|3258162|dbj|BAA30845.1| 198aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 198

 Score =  118 bits (296), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 17/186 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +  +++  + + +EP  +T LL +S L       E +    +LD+GTGTG + L   + 
Sbjct: 4   YYNGLKIESNEEVYEPAEDTFLLAESLLD------EVKSDDIVLDVGTGTGILALLAARR 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           + F   VG+DI+ KA+ +A  NA  NG+      L SD F ++ G FD+IV NPPY+   
Sbjct: 58  ARF--VVGLDINEKAINLAWKNAKINGIKNVVFIL-SDLFENIRGTFDLIVFNPPYLPGE 114

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +             ++L GG  G          V  +L+  G   +       +DV + 
Sbjct: 115 EIKDKVD--------LALIGGKTGGEVISRFLGSVKDYLSSRGRILLIYSSLTGLDVEKA 166

Query: 239 FESRKL 244
           F+ R  
Sbjct: 167 FKERGF 172


>gi|150401181|ref|YP_001324947.1| putative methylase [Methanococcus aeolicus Nankai-3]
 gi|150013884|gb|ABR56335.1| putative methylase [Methanococcus aeolicus Nankai-3]
          Length = 208

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 18/186 (9%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               +EP  ++ELL+++        + +     +LD+GTGTG   +   K+    K +G+
Sbjct: 17  HPKVYEPAEDSELLINN--------LTEVKNKSVLDVGTGTGIQAIN-AKKQGAKKVIGI 67

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLG 184
           DI+  A+E A  N   N +   +   ++SD F+S+  E  FDVI+ N PY+ +   + L 
Sbjct: 68  DINPYAIETAIENIKLNKLDANKISFIESDLFNSIKTEYKFDVILFNAPYLPTTEEEKLE 127

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFESRK 243
               ++    + DGGIDG          VS +L ++G+  +        +  + + +   
Sbjct: 128 K-YLNY----AFDGGIDGRKVLDRFIKEVSNYLKENGVIQIVQSSLTGEEKTIELLKKYG 182

Query: 244 LFLVNA 249
                 
Sbjct: 183 FKAEKT 188


>gi|315045007|ref|XP_003171879.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma
           gypseum CBS 118893]
 gi|311344222|gb|EFR03425.1| mitochondrial N(5)-glutamine methyltransferase MTQ1 [Arthroderma
           gypseum CBS 118893]
          Length = 370

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 36/199 (18%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  L + + +    + +  ILG + F  + +        PR +TE          L    
Sbjct: 56  RQRLQSLVCQRAAGKPLQYILGDQPFGELTILCREGVLIPRLDTESYTTRIAQRLLAENR 115

Query: 95  KRDV--VRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTN---- 144
                 +RI+D+ TGTG + L     L    P    +GVDIS  AL +AK N   N    
Sbjct: 116 HNPTRSLRIIDICTGTGCIPLLLHSLLAPSIPTLSIIGVDISSTALSLAKKNLEYNIGNG 175

Query: 145 ----GVSERFDTLQSDWFSSV--------------------EGLFDVIVSNPPYIESVIV 180
                  +    + +D                             D+++SNPPYI     
Sbjct: 176 SLLSRARDEVRFVHADILDPCSLKPDGSELGTLLSRSGQDHSDRLDLLISNPPYISPREF 235

Query: 181 D--CLGLEVRDFDPRISLD 197
                   VR ++P ++L 
Sbjct: 236 ANGTTRRSVRLYEPALALV 254


>gi|326334037|ref|ZP_08200266.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Nocardioidaceae bacterium Broad-1]
 gi|325948186|gb|EGD40297.1| putative protein-(glutamine-N5) methyltransferase, release
           factor-specific [Nocardioidaceae bacterium Broad-1]
          Length = 231

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 14/208 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ +        PR  T    + A   S    +      +L+L +G G + L L    
Sbjct: 14  FGHLDIDFDERVLTPRAWTARQSEWAAELSADLPDGP----MLELCSGAGQIGL-LAAAL 68

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
              + V VD    A   A++NA   G+S   +   S    +++    F +++++PP++ +
Sbjct: 69  VGRRLVCVDADPVACAFARANAERAGLSHLVEVRHSSMDQALDPDERFHLVIADPPWVPT 128

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVV 236
             V     +     P +++DGG DG+   RT     +RHL+  G   +++G  +Q   V+
Sbjct: 129 AQVGRYPED-----PLLAIDGGADGMQVARTCLATTARHLSPGGAAVLQLGTTDQADRVL 183

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           ++ E   L  V   +D  G   ++   R
Sbjct: 184 QLLEGSDLA-VEEVRDSPGEGVLVHIAR 210


>gi|242308816|ref|ZP_04807971.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489]
 gi|239524649|gb|EEQ64515.1| protoporphyrinogen oxidase [Helicobacter pullorum MIT 98-5489]
          Length = 202

 Score =  117 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 81/217 (37%), Gaps = 35/217 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC------- 112
           FY     +S  T  PRPETE+L+D A    L    K               +        
Sbjct: 3   FYGEEFYISHGTLIPRPETEILIDKAKEIILQHSCKN--------------IAEIGIGSG 48

Query: 113 -----LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGL 164
                L+LL +    K    DIS ++L  A  N     +S      +S   D+ +  +  
Sbjct: 49  IISIMLSLLLQDYPLKFYASDISPESLFNAYVNLKKFKIS-NLKLYKSAFLDFNTQNKLS 107

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD+++SNPPYI++   D +      ++P  +L GG  G      I         K     
Sbjct: 108 FDLLISNPPYIKN---DEILPHSLSYEPSKALFGGEVGDEILHQIILLAYN--AKIPHLI 162

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
            E+GYNQ+  +           +  +KD    DR  +
Sbjct: 163 CEMGYNQRQSIENFIHKIPHKKIEFYKDLANLDRGFI 199


>gi|45187617|ref|NP_983840.1| ADL256Wp [Ashbya gossypii ATCC 10895]
 gi|44982355|gb|AAS51664.1| ADL256Wp [Ashbya gossypii ATCC 10895]
          Length = 291

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 26/242 (10%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
              +     +  +   +  +LG + F  + +        PR ETE   + A   +     
Sbjct: 46  AAAVARGCRQRYRGVPLQYVLGTQPFGPLEVRCRRGVLIPRWETE---EWACELARRFAA 102

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ERFD 151
           +   +R  DL TGTG V L L       +   VD+S  A+  A+ NA    V     R D
Sbjct: 103 RGRSLRAADLCTGTGCVGLLLAHSVRGARVTAVDVSEAAVAAARQNAAALRVPLEVVRAD 162

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYR 207
             Q      +    +V+  NPPYI +   D L  E    V  ++P+++L G    L  Y 
Sbjct: 163 VRQPGGL--LRDGVEVVTCNPPYIPT---DALPRECTRSVCRYEPQLALAGD---LEFYD 214

Query: 208 TIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFES----RKLFLVNAFKDYGGNDRVLLF 262
            + D     L +      E+GY  Q   V+    +    R ++ V   +D  G  RV+  
Sbjct: 215 NLVDV---WLARTDSFVYEVGYAEQSRHVLARIAADPALRGVWRVGFREDARGQPRVVYG 271

Query: 263 CR 264
            R
Sbjct: 272 YR 273


>gi|282163397|ref|YP_003355782.1| methyltransferase [Methanocella paludicola SANAE]
 gi|282155711|dbj|BAI60799.1| methyltransferase [Methanocella paludicola SANAE]
          Length = 192

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 22/189 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R + N    L  D ++P  ++ LLV++AL       E +   R+L++GTG+G V L +  
Sbjct: 4   RVYRNKEFELLDDVYDPGEDSYLLVEAALK------EVKPDDRVLEVGTGSGVVSLFVKD 57

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +   K V  DIS     IA  NA  NGV      +++D +S +   FD+I+ NPPY+ +
Sbjct: 58  IA--AKVVATDISP----IACRNARINGVP----VVRADLYSGICSQFDLIIFNPPYLPT 107

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
           V  + LG  +       + DGG+ G          + R L   G     I       +  
Sbjct: 108 VPEEQLGSWL-----NRAFDGGLTGRREIERFIKDIDRILAPGGRILAVISSITGIDETE 162

Query: 237 RIFESRKLF 245
            +F+ +   
Sbjct: 163 ALFKDKGFH 171


>gi|302656356|ref|XP_003019932.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517]
 gi|291183708|gb|EFE39308.1| hypothetical protein TRV_06034 [Trichophyton verrucosum HKI 0517]
          Length = 371

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 73/202 (36%), Gaps = 37/202 (18%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL-- 90
           R +  L   + +    + +  ILG + F ++ +        PRP+TE          L  
Sbjct: 54  RWKQRLQLLVRQRAAGKPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLTE 113

Query: 91  PRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVTN-- 144
            R+     +RI+D+ TGTG + L     L    P    +GVDIS  AL +AK N   N  
Sbjct: 114 NRLNPTRSIRIIDICTGTGCIPLLLHSLLAPSIPTISIIGVDISATALSLAKKNLEYNIG 173

Query: 145 ------GVSERFDTLQSDWFSSV---------------------EGLFDVIVSNPPYIES 177
                    +    + +D                              D+++SNPPYI  
Sbjct: 174 NGTLLSRARDEIHFVHADILDPCYLESDGSELGEMLSRSNQGGHSKGLDLLISNPPYISP 233

Query: 178 VIV--DCLGLEVRDFDPRISLD 197
                      VR ++P ++L 
Sbjct: 234 RDFTNGTTRRSVRLYEPTLALV 255


>gi|259480051|tpe|CBF70831.1| TPA: hypothetical protein ANIA_10829 [Aspergillus nidulans FGSC A4]
          Length = 359

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 76/203 (37%), Gaps = 40/203 (19%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI- 93
           R  L +  +   +   +  ILG + F  + +  +     PR ETE +          R+ 
Sbjct: 66  RRLLKSMCLARSRGVPLQYILGDQPFGELDIKCTKGVLIPRHETEAITIHTAKLIQDRMT 125

Query: 94  ----EKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKALEIAKSNAVTN- 144
               +    +RILDL TGTG + L L        P    VGVD+S  A+ +AK N   N 
Sbjct: 126 CVERDGAAPLRILDLCTGTGCISLLLHSLLSPCFPRLSIVGVDVSAIAIRLAKENVERNV 185

Query: 145 -------GVSERFDTLQSDW-------FSSVEGLFDV--------------IVSNPPYIE 176
                        D    D         S +EGLFD               I+SNPPY+ 
Sbjct: 186 RLGLLSERALNEVDFQHGDVLGLSSGPLSQLEGLFDRTTGLSASSGPRCDVIISNPPYVS 245

Query: 177 SVIVD--CLGLEVRDFDPRISLD 197
                       VR F+PR++L 
Sbjct: 246 VEEYHDGTTSRSVRLFEPRLALV 268


>gi|290558986|gb|EFD92368.1| methylase [Candidatus Parvarchaeum acidophilus ARMAN-5]
 gi|326422531|gb|EGD71927.1| Methylase [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS']
          Length = 193

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 27/189 (14%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            + + P  ++ LL+ +          K     +LD+ TG+G + +   K +       VD
Sbjct: 8   ENVYPPSEDSMLLLRAV---------KYAKGEVLDMFTGSGIIAINAAKTAHN--VTAVD 56

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I+  A++ A+ N+  NG+      ++SD FS +E   FDVI +NPPY+            
Sbjct: 57  INPFAIDAARKNSKINGIK-NIKFIKSDLFSELENKKFDVIYANPPYLPGKKAKDWI--- 112

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRI----FES 241
            D+    +L+GG DG      +   + +HL K+G+  + I    + +     I    F  
Sbjct: 113 -DY----ALNGGKDGNEIILRLIHNLGKHLKKEGVAFIIISSLSDTEKVYKEIRRSKFSF 167

Query: 242 RKLFLVNAF 250
           RKL+ +N F
Sbjct: 168 RKLYSINFF 176


>gi|295698692|ref|YP_003603347.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia
           pediculicola USDA]
 gi|291157413|gb|ADD79858.1| hypothetical adenine-specific methylase YfcB [Candidatus Riesia
           pediculicola USDA]
          Length = 188

 Score =  116 bits (292), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 5/146 (3%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVR 64
           ++   L     LS+    +   S L   ++  +    I R         +     F    
Sbjct: 46  EAVYLLFSTIKLSTDVPEIFLSSRLTRSEKKKIAEVLISRIFDRIPSAYLTNVIWFCEHE 105

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +    F PR     L+D+    +   I   +  +ILDL TG+G + ++        + 
Sbjct: 106 LYVDERVFIPRSPISELIDN----NFESIINVEPKKILDLCTGSGCIAISCAHIFKNSEI 161

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF 150
              DIS +ALE+A+ N   + +SER 
Sbjct: 162 EASDISREALEVARKNIELHSLSERI 187


>gi|239979273|ref|ZP_04701797.1| methyltransferas [Streptomyces albus J1074]
 gi|291451152|ref|ZP_06590542.1| methyltransferase [Streptomyces albus J1074]
 gi|291354101|gb|EFE81003.1| methyltransferase [Streptomyces albus J1074]
          Length = 224

 Score =  116 bits (292), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +  + P+ +T LL  +  A      +      +LDLGTGTGAV L         +   VD
Sbjct: 16  AGVYAPQHDTALLTRAVTAE-----QPGPGTEVLDLGTGTGAVALHAA--RTGARVTAVD 68

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           IS  A+  A+ NA       R    + D  + V G  FD++VSNPPY+ +          
Sbjct: 69  ISWTAVLTARLNAARARC--RLRVHRGDLTAPVTGRTFDLVVSNPPYVPAPEETPPASG- 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + D G DG +    I       L   G   +  
Sbjct: 126 ----PARAWDAGPDGRALLDRICADAPAALRPGGTLLLVH 161


>gi|319949423|ref|ZP_08023485.1| putative methyltransferase [Dietzia cinnamea P4]
 gi|319436920|gb|EFV91978.1| putative methyltransferase [Dietzia cinnamea P4]
          Length = 222

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 16/183 (8%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           + +    + P+ ++ LL D     +L   +     R+LD+ TG+G + +    +    + 
Sbjct: 9   IEVDDGVYAPQDDSWLLCD-----ALEDCDVVAGKRVLDICTGSGILAIEAALKGAR-EV 62

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCL 183
           V  DIS  A+  A SNA   GV    D        +   G FDV+VSNPPY+ S      
Sbjct: 63  VAYDISPAAVACASSNAERAGVD--VDVRLGTLADARYAGPFDVVVSNPPYVPSDAPLEG 120

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESR 242
                   P  + D G +G      +       L   G   +    ++     +   E  
Sbjct: 121 TG------PNRAWDAGANGRVVLDELCALAPDLLVPGGTMLIVHSEFSDPPQTISKMEQF 174

Query: 243 KLF 245
              
Sbjct: 175 GFT 177


>gi|84490323|ref|YP_448555.1| hypothetical protein Msp_1545 [Methanosphaera stadtmanae DSM 3091]
 gi|84373642|gb|ABC57912.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 197

 Score =  115 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 74/168 (44%), Gaps = 17/168 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            + N++     + + P  +T LL+D+ +         ++   +L++G G G   +++   
Sbjct: 2   KYENIKYNECDEVYPPAEDTFLLIDNLIV--------KNNDSVLEVGCGCGI--VSIAAS 51

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE-S 177
               K   +DI+  A++  K N   N   +  + ++S+ F  ++  +D+I+ N PY+  +
Sbjct: 52  LNAEKVTSIDINPHAIKCTKENIKLNN-RKNIEVIESNLFEKIDDKYDLILFNTPYLPVT 110

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                +  +        + DGG+DG        +   ++L +DG   +
Sbjct: 111 EEEHDVDDDYSK-----AWDGGVDGRKVIDAFLEEAPKYLKEDGTIQL 153


>gi|328887293|emb|CCA60532.1| Uncharacterized methyltransferase [Streptomyces venezuelae ATCC
           10712]
          Length = 229

 Score =  115 bits (288), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 15/165 (9%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L      + P+ +T LL +     +L R E      +LD+GTGTG   LAL       +
Sbjct: 15  KLIALPGVYSPQADTRLLAE-----ALSREELDATTDVLDIGTGTG--ALALCAARTGAR 67

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
            V VD+S +A+  AK NA+  G  +R   L  D+ + V+G  FD+I++NPPY+ S     
Sbjct: 68  VVAVDVSWRAVIAAKLNAIRQG--QRLRVLHGDFSTRVQGRRFDLILTNPPYVPSARSRP 125

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                       + D G DG +    +       L   G+  +  
Sbjct: 126 PS-----HGAARAWDAGPDGRAVIDRVCARAPALLRPGGVLLMVH 165


>gi|85813537|emb|CAF33043.1| putative oxidase > apramycin biosynthesisN-methyltransferase
           [Streptoalloteichus tenebrarius]
          Length = 262

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/241 (22%), Positives = 83/241 (34%), Gaps = 21/241 (8%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           LRD    L    G+S   V   P     D         +   +    +  +LG   +   
Sbjct: 9   LRD---LLAAAAGVSPSAVDGWPG---GDGWLARAAAMLTDYVAGVPLGYVLGEVHYLGR 62

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                      R   E LV   L            VR +++G G GA    +  E    +
Sbjct: 63  PFRSDRRALAVRRYNEPLVRRILTDF-----AGQEVRAVEIGCGAGAAVCTMALELAG-E 116

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            VG D+  +ALE+A  NA  +G   R   + SD F +++G FDVI +N   +        
Sbjct: 117 FVGTDVDPEALELAAENARRHGAPVR--LVTSDLFDALDGRFDVIYAN---LPRQDPRAP 171

Query: 184 GLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             E R ++P ++L       L   R     V   L   G   +EI  +    +  +    
Sbjct: 172 VPEGR-WEPSVALYDQSAQPLGLLRRFFTEVPDRLTDRGRLYLEIPLD--PRLAALLPGE 228

Query: 243 K 243
            
Sbjct: 229 P 229


>gi|255023945|ref|ZP_05295931.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Listeria monocytogenes FSL J1-208]
          Length = 141

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++  + +  L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWTEINRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           ++ D   PRPETE LV    A +   ++K  V  +LD+ TG+G + +A
Sbjct: 85  VTEDVLIPRPETEELV----ACAEDFLKKHPVKNVLDVCTGSGIIAIA 128


>gi|257076094|ref|ZP_05570455.1| methyltransferase [Ferroplasma acidarmanus fer1]
          Length = 180

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 26/163 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +  S D ++P  +T L++D+A               +L++G+G+G + + L ++    
Sbjct: 2   INIDYSDDVYKPSDDTYLILDNAEC----------GKSVLEMGSGSGLIAITLARQ--GH 49

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DIS +A+ + K NA  N V    + ++SD F ++ G +D I+ NPPY+       
Sbjct: 50  SVTAADISPEAINLIKHNAFINNVD--MEIVRSDLFENIHGKYDTIIFNPPYLPVEGES- 106

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    P+ +  GG DG +           +LN  G   +
Sbjct: 107 ---------PQWA--GGKDGFAVTGKFLATAHEYLNPGGNIFL 138


>gi|329936375|ref|ZP_08286140.1| methyltransferase [Streptomyces griseoaurantiacus M045]
 gi|329304171|gb|EGG48052.1| methyltransferase [Streptomyces griseoaurantiacus M045]
          Length = 220

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 22/188 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  +    + P+ +T LL     A +L          +LD+GTG+G   LAL+      
Sbjct: 1   MKPLVLPGVYAPQDDTALL-----AGALSDEPLAPDALVLDVGTGSG--ALALVAARRGA 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +   VD+S +A+  A+ NA   G+  R   L+ + F+ V G  FD++++NPPY+ +    
Sbjct: 54  RVTAVDVSRRAVYAARLNAWRAGL--RIRALRGNLFTPVAGETFDLVLANPPYVPTPHGH 111

Query: 182 CLGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                    +PR    + D G DG      I     + L   G+  +           + 
Sbjct: 112 Q--------EPRGRARAWDAGHDGRLVLDRICGQAPKLLRPGGVLLLVHSVLSGPERTLE 163

Query: 238 IFESRKLF 245
              +  L 
Sbjct: 164 QLRAAGLT 171


>gi|298675524|ref|YP_003727274.1| methylase [Methanohalobium evestigatum Z-7303]
 gi|298288512|gb|ADI74478.1| methylase [Methanohalobium evestigatum Z-7303]
          Length = 200

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 23/189 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++   R+    + +EP  +T LL DSA  +       +D + IL++GTGTG V  A+LK 
Sbjct: 5   EYKYTRVQFVDNVYEPAEDTFLLTDSAFNYI------KDGMNILEIGTGTGFVS-AVLKN 57

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
           +     V  +I+  A + A+SN          + ++++ F  ++    FD+I+ NPPY+ 
Sbjct: 58  NFEVNIVSTEINPDAAQCARSN--------DVEVIRTNMFDGLKPIQCFDLILFNPPYLP 109

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-V 235
           +   + +     ++    + DGG+DG    R   D V  +L  DG   + +     +D +
Sbjct: 110 TSDDEKVPGW-MNY----AYDGGVDGCDAIRNFLDNVCNYLKPDGSIMLLVSSFSGIDYI 164

Query: 236 VRIFESRKL 244
            ++ ES   
Sbjct: 165 KKVMESYGF 173


>gi|154151408|ref|YP_001405026.1| putative methylase [Candidatus Methanoregula boonei 6A8]
 gi|153999960|gb|ABS56383.1| putative methylase [Methanoregula boonei 6A8]
          Length = 185

 Score =  113 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 24/193 (12%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            ++P  +T LL+++A      + E R   R+L++GTG+G +  AL++     + V  DI+
Sbjct: 8   VYQPEADTFLLLEAA------QEEVRPGDRVLEIGTGSGRIAAALVR---DHEVVATDIN 58

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A+  A+         E  D ++ D FS + G F++I+ NPPY+ +   + +   +   
Sbjct: 59  PHAVFCARK--------EGLDVIRCDLFSGIRGRFNLILFNPPYLPTRPEERIDDWL--- 107

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNA 249
               +LDGG  G +     A  V   L+  G   + I       +V  +F      +   
Sbjct: 108 --EFALDGGATGRATIDRFASSVGDVLSPGGRLLLLISTLTGLPEVQELFSRYGFAVSVV 165

Query: 250 FKD-YGGNDRVLL 261
            +    G D  +L
Sbjct: 166 RQQALEGEDLFVL 178


>gi|294495697|ref|YP_003542190.1| methylase [Methanohalophilus mahii DSM 5219]
 gi|292666696|gb|ADE36545.1| methylase [Methanohalophilus mahii DSM 5219]
          Length = 197

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 23/188 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N  +++ +D +EP  ++ LL D A+          D +++L++G G+G V  A++  +
Sbjct: 6   YRNAFVSIENDVYEPAEDSFLLADVAIDRI------SDGMKVLEMGVGSGFVS-AVVAAN 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIES 177
              +  G DI+  ALE A  N             +S+ F  +     FDVI+ NPPY+ +
Sbjct: 59  KNVEPTGCDINPDALECAYKNG--------IQVFRSNLFGGLTKKAYFDVILFNPPYLPT 110

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
              + L     ++    + DGG++G     T    VS +L   G   + I       +V 
Sbjct: 111 SEEEKLEGW-LNY----AFDGGVEGRDIIATFFAEVSDYLKPGGSVLLFISSLTGRREVF 165

Query: 237 RIFESRKL 244
            I E    
Sbjct: 166 DIMEREGF 173


>gi|303322338|ref|XP_003071162.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110861|gb|EER29017.1| hypothetical protein CPC735_037230 [Coccidioides posadasii C735
           delta SOWgp]
 gi|320040653|gb|EFW22586.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 391

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 83/248 (33%), Gaps = 59/248 (23%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +       V  LS        ++  D  ++  L + +    +   +  ILG + F  
Sbjct: 32  ARNELRWLREHVHSLSKA------NACNDAWRQRQLKSMVRDRARGMPLQYILGDQPFGE 85

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + +        PRPETE          L+           +RILDL TGTG + L L   
Sbjct: 86  LDILCRKGVLIPRPETESYTFRTARLILSELRMGSSSPAPIRILDLCTGTGCIPLLLHSL 145

Query: 119 S----PFFKGVGVDISCKALEIAKSNAVTNGVSER--------FDTLQSDWFS------- 159
                P    VG+DIS KAL +A+ N   N                LQ++          
Sbjct: 146 LASSIPDLALVGIDISRKALSLARENLEYNISQNHLLPRARQDISFLQANVLRDEKAELV 205

Query: 160 ----------------------------SVEGLFDVIVSNPPYIESVIV--DCLGLEVRD 189
                                        + G +DV++SNPPYI  V          VR 
Sbjct: 206 KREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPYISPVDFCNGTTRRSVRL 265

Query: 190 FDPRISLD 197
            +P ++L 
Sbjct: 266 HEPTLALV 273


>gi|297196307|ref|ZP_06913705.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722884|gb|EDY66792.1| methyltransferase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 221

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 15/162 (9%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L+   + P+ +T LL D     +L R   +    +LD+GTGTGA+ L   +     + 
Sbjct: 8   LVLAPGVYAPQSDTFLLAD-----ALEREPLKPGAEVLDVGTGTGALALTAARR--GARV 60

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD S +A+   + NAV      R   L  D      G  FD+IV NPPY+ +      
Sbjct: 61  TAVDRSWRAVVATRLNAVL--ARRRVRVLHGDLLDPAMGRRFDLIVCNPPYVPAPHAHPP 118

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     ++ D G DG +    I DG +  LN  G   +
Sbjct: 119 RRGA-----AVAWDAGHDGRAVLDRICDGAAELLNPSGALLM 155


>gi|119196521|ref|XP_001248864.1| hypothetical protein CIMG_02635 [Coccidioides immitis RS]
          Length = 391

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/248 (22%), Positives = 83/248 (33%), Gaps = 59/248 (23%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +       V  LS        ++  D  ++  L + +    +   +  ILG + F  
Sbjct: 32  ARNELRWLREHVHSLSKA------NACDDAWRQRQLKSMVRDRARGMPLQYILGDQPFGE 85

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + +        PRPETE          L+           +RILDL TGTG + L L   
Sbjct: 86  LDILCRKGVLIPRPETESYTFRTARLILSELQMGSSSPAPIRILDLCTGTGCIPLLLHSL 145

Query: 119 S----PFFKGVGVDISCKALEIAKSNAVTNGVSER--------FDTLQSDWFS------- 159
                P    VG+DIS KAL +A+ N   N                LQ++          
Sbjct: 146 LASSIPDLALVGIDISRKALSLARKNLEYNISQNHLLPRARQDISFLQANVLRDEKAELV 205

Query: 160 ----------------------------SVEGLFDVIVSNPPYIESVIV--DCLGLEVRD 189
                                        + G +DV++SNPPYI  V          VR 
Sbjct: 206 KREGDAIPSLQAVLADFESAADIRNSRKDLRGQWDVLISNPPYISPVDFCNGTTRRSVRL 265

Query: 190 FDPRISLD 197
            +P ++L 
Sbjct: 266 HEPTLALV 273


>gi|333027280|ref|ZP_08455344.1| putative methyltransferase [Streptomyces sp. Tu6071]
 gi|332747132|gb|EGJ77573.1| putative methyltransferase [Streptomyces sp. Tu6071]
          Length = 232

 Score =  113 bits (283), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 10/164 (6%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L      + P+ +T LL     A +L          +LDL TG+G   LALL      + 
Sbjct: 14  LWTLPGVYAPQADTHLL-----ARALGTEPIGPHTHVLDLCTGSG--ALALLAARRGARV 66

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
              D+S +A+  A+ NA   G  +R   L+ D    V G  FD++VSNPPY+        
Sbjct: 67  CATDLSWRAVVSARINAARAG--QRVRVLRGDLSGPVRGQRFDLVVSNPPYVPDPAARTG 124

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               R     ++ D G  G      +       L+  G+  +  
Sbjct: 125 PRRGRSHAASLAWDAGPGGRHLVDRVCAHAGDVLSPRGVLLLVH 168


>gi|327295731|ref|XP_003232560.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892]
 gi|326464871|gb|EGD90324.1| hypothetical protein TERG_06551 [Trichophyton rubrum CBS 118892]
          Length = 370

 Score =  112 bits (282), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 74/201 (36%), Gaps = 36/201 (17%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP- 91
           R R  L   + +    + +  ILG + F ++ +        PRP+TE          L  
Sbjct: 54  RWRQRLQLLVRQRAAGKPLQYILGDQPFGDLTILCREGVLIPRPDTESYTTRIAQRLLAE 113

Query: 92  -RIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN-- 144
            R+     VRI+D+ TGTG + L L        P    +GVDIS  AL +AK N   N  
Sbjct: 114 NRLNPTRSVRIIDVCTGTGCIPLLLHSLLASLIPTISIIGVDISAAALSLAKKNLEYNIR 173

Query: 145 ------GVSERFDTLQSDWFSS--------------------VEGLFDVIVSNPPYIESV 178
                    +    + +D                        +    D+++SNPPYI   
Sbjct: 174 NGALLSRARDEIHFVHADILDPCYLEPDGSELGKMLSRSNQGLSRGLDLLISNPPYISPR 233

Query: 179 IV--DCLGLEVRDFDPRISLD 197
                     VR ++P ++L 
Sbjct: 234 DFTNGTTRRSVRLYEPTLALV 254


>gi|297204301|ref|ZP_06921698.1| methyltransferase [Streptomyces sviceus ATCC 29083]
 gi|297148631|gb|EDY59878.2| methyltransferase [Streptomyces sviceus ATCC 29083]
          Length = 224

 Score =  112 bits (281), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +    + P+ +T LL     A +L          +LD+GTGTG   LAL       +
Sbjct: 9   PPLVLPGVYGPQEDTALL-----AGALSEEPLPPGADVLDVGTGTG--ALALQAARRGSR 61

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VD+S +A+  A++NA   G S R    + + F  V G  FD+I+SNPPY+ +     
Sbjct: 62  VTAVDVSWRAVCTARANAWLTGASVRVR--RGNLFHPVRGQSFDLILSNPPYVPA----- 114

Query: 183 LGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY--NQKVDVVR 237
               VR   PR    + D G DG      +       L   G+  +      +    V  
Sbjct: 115 -PTGVRP--PRGRARAWDAGHDGRFVLDRVCREAPALLRPGGVLLIVHSELSDSGRTVGH 171

Query: 238 IFESRKLFLVNAFK 251
           +     L      +
Sbjct: 172 L-REAGLKAAVTRR 184


>gi|29833736|ref|NP_828370.1| methyltransferas [Streptomyces avermitilis MA-4680]
 gi|29610860|dbj|BAC74905.1| putative methyltransferase [Streptomyces avermitilis MA-4680]
          Length = 221

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 15/167 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              L      + P+ +T+LL     A +L R +      +LDLGTG+GA+ +   +    
Sbjct: 6   GPYLLTPPGVYAPQHDTDLL-----ARALRREDIDTSTEVLDLGTGSGALAVHAARL--G 58

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   VDIS +A+  A+ NA+  G   R    + D  ++V G  +D++VSNPPY+ S   
Sbjct: 59  ARVTAVDISRRAVLTARLNALLAG--RRVTVRRGDLTAAVPGRSYDLVVSNPPYVPSPSA 116

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                         + D G DG +    I D     L   G   +  
Sbjct: 117 RLPSRGA-----ARAWDAGHDGRAFVDRICDTAPAALRAGGALLIVH 158


>gi|255513476|gb|EET89742.1| methylase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 196

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 25/176 (14%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            ++    + +V++T     + P  ++ +L            E++   ++LDLGTGTG   
Sbjct: 9   HLIKIMIYESVKITGCRGVYYPAEDSYMLAKIV--------ERKAFGKVLDLGTGTGIQG 60

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           +   K     +    DIS  AL+ A+ NA  NGV  RF  L+SD FS V+G F+ I+ NP
Sbjct: 61  IVAAKA--GCEVYFSDISENALQCAEKNAELNGVHGRF--LRSDLFSKVKGRFNTIIFNP 116

Query: 173 PYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVSRHLNK-DGLCSVE 226
           PY+ES             + R + LDGG+ G         GV   L   + +  VE
Sbjct: 117 PYLESGK-----------EIRYADLDGGVLGRELIDRFLSGVKEFLLPDNTVLLVE 161


>gi|320006881|gb|ADW01731.1| methylase [Streptomyces flavogriseus ATCC 33331]
          Length = 227

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      + P+ +T LL       +L R        +LD+GTG+GA+ L   +     
Sbjct: 12  LPLMTLPGVYAPQHDTRLL-----MAALNREGISPGTEVLDVGTGSGALALHAARL--GA 64

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   VDI+ +A+  A+ NA+ +    R    +SD  S++ G  +D+++ NPPY+ S  +D
Sbjct: 65  RVTAVDIARRAVATARLNALLH--RRRITVQRSDLLSALPGRSYDLVICNPPYVPSP-LD 121

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +           + D G DG +    + +     L   G   +  
Sbjct: 122 RIPG----HGAARAWDAGCDGRAILDRMCETAPAALRPGGRLLLVH 163


>gi|296166757|ref|ZP_06849181.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295897927|gb|EFG77509.1| methyltransferase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 229

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 66/160 (41%), Gaps = 9/160 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++ + P+ ++ LLV+     SL         R+LDL TG+G V +A   E         D
Sbjct: 14  ANVYRPQDDSCLLVEVMRESSLI-----PGRRVLDLCTGSGFVAIA-AAELGGADVTAFD 67

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           I   A+  ++ NA   GV    D  +  W  +++   FDV+VSNPPY+ +          
Sbjct: 68  ICPHAVGCSRGNAAAAGVD--VDVRRGTWSDALDCAPFDVVVSNPPYVPTPPDGDTEYIS 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + + G DG      + +   + L   G   +  
Sbjct: 126 PAAGPSWAWNAGPDGRMLLDPLCEAAPKLLCDGGSLLLVH 165


>gi|282865730|ref|ZP_06274780.1| methylase [Streptomyces sp. ACTE]
 gi|282559374|gb|EFB64926.1| methylase [Streptomyces sp. ACTE]
          Length = 228

 Score =  111 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 17/188 (9%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL      + P+ +T LL+ +       R E      +LDLGTG+GA+ L   +     +
Sbjct: 14  RLVTLPGVYAPQHDTHLLMAAV-----NREEIGPGTDVLDLGTGSGALALHAAQR--GAR 66

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VD++ +A+  A+ NA       R    +SD  S++ G  +D+++ NPPY+ S +   
Sbjct: 67  VTAVDVARRAVMTARLNA--LIRRRRISVHRSDLLSALPGRSYDLVICNPPYVPSPL--- 121

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFE 240
               +       + D G DG +    + +     L   G   +      +    V R+ E
Sbjct: 122 --GRLPAHGAARAWDAGCDGRAVLDRVCEAAPAALRPGGRLLMVHSGLCDSGTTVRRLSE 179

Query: 241 SRKLFLVN 248
           +  L  V 
Sbjct: 180 AGLLAEVT 187


>gi|160884585|ref|ZP_02065588.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483]
 gi|156110324|gb|EDO12069.1| hypothetical protein BACOVA_02572 [Bacteroides ovatus ATCC 8483]
          Length = 236

 Score =  111 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P    V ++I   A+  A+ N + +   ER 
Sbjct: 32  WTSVESAHRILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAVGQARENVIRSPWKERV 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+            +  +S          Y  
Sbjct: 92  EVVQADFRKYRSSDKFDVIVSNPPYFVDSLECPDRQRTAARHNNSLS----------YED 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLL 261
           + +GVS  L ++G  +V I  +    V +I   +KL+ V         GG   RVL+
Sbjct: 142 LLEGVSGLLTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|302562332|ref|ZP_07314674.1| methylase [Streptomyces griseoflavus Tu4000]
 gi|302479950|gb|EFL43043.1| methylase [Streptomyces griseoflavus Tu4000]
          Length = 223

 Score =  111 bits (279), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 15/158 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +TELL     A +L          +LD+GTG+G   LA+       +   VD
Sbjct: 13  PGVYAPQEDTELL-----AGALSDEPVPPDAAVLDVGTGSG--ALAVAAARRGCRVTAVD 65

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A+  A+ NA+  GV  R    + D F  V G  FD++++NPPY+ +     L    
Sbjct: 66  VSWRAVGTARLNALRAGVPVRVR--RGDLFGPVRGESFDLVLANPPYVPAPGGPSLPRGA 123

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  + D G DG      I       L   G+  +
Sbjct: 124 AR-----AWDAGADGRLVLDRICREGKALLRPGGVLLL 156


>gi|240172926|ref|ZP_04751585.1| methylase, putative [Mycobacterium kansasii ATCC 12478]
          Length = 223

 Score =  111 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 9/160 (5%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++   ++P+ ++ LLVD+     L         R+LDL TG+G V +A   E        
Sbjct: 6   VADMVYQPQFDSRLLVDTMRRTGLI-----PRRRVLDLCTGSGFVAIA-AAEMGCASVTA 59

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
            DI   A+  ++ N    GV    D  Q  W  + +   F+VIVSNPPY+ +  VD    
Sbjct: 60  FDICPHAVRCSRDNVADAGVD--VDVRQGSWTRAFDCAPFEVIVSNPPYVPAPPVDDSDA 117

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 P  + + G DG      +    ++ L   G   +
Sbjct: 118 ISPAAGPSWAWNAGPDGRLVLDPLCKSAAKLLCDGGSLLL 157


>gi|307354001|ref|YP_003895052.1| methylase [Methanoplanus petrolearius DSM 11571]
 gi|307157234|gb|ADN36614.1| methylase [Methanoplanus petrolearius DSM 11571]
          Length = 190

 Score =  111 bits (279), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 22/182 (12%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L      + P  +T LL ++ +       E +   R++++GTG+G +   + + S   +
Sbjct: 3   ELFYHEQVYRPEEDTFLLSEAVMH------EIKSTDRVIEIGTGSGFISSGIRERSE--Q 54

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DI+  A   AK N          + +++D FS + G FD+++ NPPY+ +   + +
Sbjct: 55  VIATDINPYACTTAKKNG--------VEVVRTDLFSGICGTFDLVIFNPPYLPTKAEERI 106

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESR 242
              +       +LDGG DG +  +  A+ +   L+K G C + I       +V +IF   
Sbjct: 107 DDWL-----EYALDGGEDGRTTIQKFAEQLGSVLSKTGRCLILISSLTGTDEVRKIFSDL 161

Query: 243 KL 244
             
Sbjct: 162 GF 163


>gi|121714762|ref|XP_001274991.1| hypothetical protein ACLA_077240 [Aspergillus clavatus NRRL 1]
 gi|119403146|gb|EAW13565.1| hypothetical protein ACLA_077240 [Aspergillus clavatus NRRL 1]
          Length = 371

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/299 (21%), Positives = 99/299 (33%), Gaps = 66/299 (22%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +      +   +      VD  ++     R  L +  +   +   +  ILG + F +
Sbjct: 32  ACNEFRWLREKALDMKPKDRHVDSPTL--TGWRSALRSMCLSRSRGMPLQYILGDQPFGD 89

Query: 63  VRLTLSSDTFEPRPETELL---VDSALAFSLPRIEKRD-------VVRILDLGTGTGAVC 112
           + +        PR ETE +   +   +    P     D        ++I+DL +GTG + 
Sbjct: 90  LNIMCRRGVLIPRSETESITIHIAKVICHEFPGPTHPDGASAARYPLQIVDLCSGTGCIS 149

Query: 113 L----ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------------------- 149
           L     L         +G+DI  KA+ +AK N + N    R                   
Sbjct: 150 LLLHALLAPRFDHLSILGIDIHPKAIRLAKDNLLHNFRLGRLSKRAIAEIQYCRGDILCR 209

Query: 150 ------FDTLQSDWFSSVEG----------LFDVIVSNPPYIESVIVD--CLGLEVRDFD 191
                  D     +F S +G            DV+V+NPPYI +           VR F+
Sbjct: 210 QGQFPGIDDCLLTYFRSPQGSKESLDVEERRVDVLVANPPYISAESFHDGTTARSVRIFE 269

Query: 192 PRISLD----------GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIF 239
           P ++L           G  +    YR I   +S  L    L   E G   Q   V   F
Sbjct: 270 PTLALVPPVWSPPPMTGFYEEDLFYRDIV-LLSLKLRPR-LVVFECGDREQAARVSAAF 326


>gi|284029089|ref|YP_003379020.1| methylase [Kribbella flavida DSM 17836]
 gi|283808382|gb|ADB30221.1| methylase [Kribbella flavida DSM 17836]
          Length = 216

 Score =  110 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 72/190 (37%), Gaps = 16/190 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++       F P  ++ +L D+    SL         R LD+ TG+G + L   +     
Sbjct: 1   MKFMTLPGVFAPISDSWMLADAIRQESL-----GPGSRALDVCTGSGVLALTAAQ--CGA 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
               +D+S +AL   + NA+ +G+  R  TL+   F  V G  FD+IVSNPPY+ S   D
Sbjct: 54  TTTAIDVSRRALLTVRLNALRHGL--RVRTLRGQTFGPVAGERFDLIVSNPPYVPSPRAD 111

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFE 240
                V       + + G DG      + D    HL   G   +        D  +    
Sbjct: 112 -----VPRSGASRAWEAGHDGRIVLDALCDEAPAHLRPGGAILLVHSSLIGTDTTLDRLR 166

Query: 241 SRKLFLVNAF 250
              L      
Sbjct: 167 RAGLTDAEVR 176


>gi|20090299|ref|NP_616374.1| HemK related protein [Methanosarcina acetivorans C2A]
 gi|19915299|gb|AAM04854.1| HemK related protein [Methanosarcina acetivorans C2A]
          Length = 202

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 28/203 (13%)

Query: 57  WRDFYNVRLTLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
             ++ N R+ L +    +EP  ++ LL D+AL       E +  +R+L++G G+G V   
Sbjct: 3   EIEYKNTRVKLGASDLVYEPAEDSFLLADAALE------EAKPGMRVLEIGAGSGFVSAV 56

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIV 169
           L       +    +I+  A   AK+N          + +++D F  ++       FD+I+
Sbjct: 57  LRANVEDIRIFATEINPHAARCAKANG--------IEVIRTDLFRGLKPGSSKTSFDLIL 108

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
            NPPY+ +   + +   +       + DGG  G        D V  +L   G   V I  
Sbjct: 109 FNPPYLPTSEEEKVPGWL-----NYAFDGGASGRETLDRFLDEVRNYLKPGGKILVLISS 163

Query: 230 NQK-VDVVRIFESRKLFLVNAFK 251
                 V    E      V   +
Sbjct: 164 ITGLEAVKERMERLGF-EVGVVR 185


>gi|302510681|ref|XP_003017292.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371]
 gi|291180863|gb|EFE36647.1| hypothetical protein ARB_04171 [Arthroderma benhamiae CBS 112371]
          Length = 398

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 72/201 (35%), Gaps = 36/201 (17%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP- 91
           R +  L   + +    + +  ILG + F  + +        PRP+TE          L  
Sbjct: 54  RWKQRLQLLVRQRAAGKPLQYILGDQPFGELTILCREGVLIPRPDTESYTTRIAQRLLAE 113

Query: 92  -RIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN-- 144
            R+     ++I+D+ TGTG + L L        P    +GVDIS  AL +AK N   N  
Sbjct: 114 NRLNPTRSIQIIDICTGTGCIPLLLHSLLASSVPTISIIGVDISATALSLAKKNLEYNIG 173

Query: 145 ------GVSERFDTLQSDWFSSV--------------------EGLFDVIVSNPPYIESV 178
                    +    + +D                             D+++SNPPYI   
Sbjct: 174 NGSLLSRARDEIHFVHADILDPCYLESDGSELGEMLSRSNQGHSKGLDLLISNPPYISPR 233

Query: 179 IV--DCLGLEVRDFDPRISLD 197
                     VR ++P ++L 
Sbjct: 234 DFTNGTTRRSVRLYEPTLALV 254


>gi|260174909|ref|ZP_05761321.1| putative RNA methyltransferase [Bacteroides sp. D2]
 gi|315923152|ref|ZP_07919392.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697027|gb|EFS33862.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 236

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER 
Sbjct: 32  WASVEGARRILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWRERV 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+                      D L+ Y  
Sbjct: 92  EVVQADFKKYRSSDKFDVIVSNPPYFVDSLECPDRQRAAARH---------NDSLT-YDD 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLL 261
           + +GVS  L ++G  +V I  +    V +I   +KL+ V         GG   RVL+
Sbjct: 142 LLEGVSGLLTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|148643433|ref|YP_001273946.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061]
 gi|222445675|ref|ZP_03608190.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349777|ref|ZP_05975194.1| putative methylase [Methanobrevibacter smithii DSM 2374]
 gi|148552450|gb|ABQ87578.1| methyltransferase, HemK [Methanobrevibacter smithii ATCC 35061]
 gi|222435240|gb|EEE42405.1| hypothetical protein METSMIALI_01316 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860561|gb|EFC92859.1| putative methylase [Methanobrevibacter smithii DSM 2374]
          Length = 193

 Score =  110 bits (275), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +  +   + P  ++ +L ++ L  +           +L++GTG+G V +   K +   K 
Sbjct: 6   IDTAETVYTPAEDSYMLAENLLIENDQ--------SVLEIGTGSGIVAMYASKLTK--KV 55

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
              DI+  ALE+AK N   N + E  + L  + F  V+   FDVI+ N PY+ +   + L
Sbjct: 56  TATDINFDALELAKKNFKLNNI-ENIELLFGNLFEPVKDRKFDVILFNTPYLPTENDEVL 114

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                ++    + DGG+DG        + V  +LN  G+  +
Sbjct: 115 DDN-LNY----AFDGGLDGRKVIDLFLNEVKNYLNDGGIVQL 151


>gi|73670682|ref|YP_306697.1| HemK-like protein [Methanosarcina barkeri str. Fusaro]
 gi|72397844|gb|AAZ72117.1| HemK related protein [Methanosarcina barkeri str. Fusaro]
          Length = 202

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 18/197 (9%)

Query: 57  WRDFYNVRLTLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
             ++   R+ L      +EP  ++ LL D+AL  + P       +RIL++GTG+G V   
Sbjct: 3   EIEYRKTRIKLGDTDLVYEPAEDSFLLADAALKDAKP------GMRILEIGTGSGFVSSV 56

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           LL        V  +I+  A   AK N V      R D  +     + E LFD+I+ NPPY
Sbjct: 57  LLTNLKEIYLVATEINPHAARCAKMNGVK---VIRTDLFKGIKSKNPENLFDLILFNPPY 113

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-V 233
           + +   + +   +       + DGGI G        D V  +L   G   V I       
Sbjct: 114 LPTSEEEKVPGWL-----NYAFDGGISGRDTLDRFLDEVRDYLKLGGEILVLISSITGLD 168

Query: 234 DVVRIFESRKLFLVNAF 250
            V    E      V   
Sbjct: 169 AVKAKMEKLGF-EVEVV 184


>gi|312139988|ref|YP_004007324.1| methyltransferase [Rhodococcus equi 103S]
 gi|325674537|ref|ZP_08154225.1| methyltransferase [Rhodococcus equi ATCC 33707]
 gi|311889327|emb|CBH48643.1| putative methyltransferase [Rhodococcus equi 103S]
 gi|325554797|gb|EGD24471.1| methyltransferase [Rhodococcus equi ATCC 33707]
          Length = 242

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 24/185 (12%)

Query: 45  SLKHESIHRILGW-RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
               E I    G  R F+ +        + P+ +T LL     A +L         R+LD
Sbjct: 8   RGTGEPIRPRNGKPRKFWRL-----PGVYPPQSDTYLL-----ARTLLGEPIEPGTRVLD 57

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-E 162
           +G GTG + ++            VD++ +AL   + NA  NGV  R   +  D  + + E
Sbjct: 58  IGAGTGYLSVSAALAGSR-NVTAVDVAKRALLNTRLNATLNGVQIR--AVHGDLTNPLGE 114

Query: 163 GLFDVIVSNPPYIESVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             FD++VSNPPY+ +   D L      R +      D G DG +H   I     R L   
Sbjct: 115 NNFDLVVSNPPYVPAAD-DTLPTGGLARCW------DAGRDGRAHLDRICREAPRILAPG 167

Query: 221 GLCSV 225
           G+  +
Sbjct: 168 GVLLL 172


>gi|182440236|ref|YP_001827955.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178468752|dbj|BAG23272.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 252

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 15/158 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL   ALA     I       +LDL TG+GA+ L   +     +   VD
Sbjct: 43  PGVYRPQTDTLLL---ALAMRREGI--GPGTDLLDLCTGSGALALHAARL--GARVTAVD 95

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           IS +A+  A+ N     +       + D   ++ G  FD +VSNPPY+ +  +      +
Sbjct: 96  ISRRAVASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAPGLS-----L 148

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             + P  S D G DG      I D  S  L   GL  +
Sbjct: 149 PRYGPGRSWDAGPDGRVILDRICDDASAALRPGGLLLL 186


>gi|254381772|ref|ZP_04997136.1| methyltransferase [Streptomyces sp. Mg1]
 gi|194340681|gb|EDX21647.1| methyltransferase [Streptomyces sp. Mg1]
          Length = 218

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 15/160 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL +     +L R +      +L++GTGTG   LAL       +   VD
Sbjct: 9   PGVYRPQADTRLLAE-----ALTREDFGSRRDVLEIGTGTG--ALALHAAGRGARVTAVD 61

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           ++  A+  A+ NA+   V  R   L  D+ +  EG  +D++V+NPPY+ +          
Sbjct: 62  VAWPAVVTARLNALRQRVPLRV--LHGDFAARTEGRRYDLVVANPPYVPAPATRPPA--- 116

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               P  + D G DG      I       L   G+  +  
Sbjct: 117 --HGPERAWDAGPDGRDVIDRICARAPALLRPGGVLLMVH 154


>gi|299145710|ref|ZP_07038778.1| SmtA protein [Bacteroides sp. 3_1_23]
 gi|298516201|gb|EFI40082.1| SmtA protein [Bacteroides sp. 3_1_23]
          Length = 236

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P    V ++I   A+  A+ N + +   ER 
Sbjct: 32  WTSVESAHRILDIGTGTGLVALMLAQRSLPDTNIVALEIDEAAVGQARENVIRSPWKERV 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY I+S+                      D L+ Y  
Sbjct: 92  EVVQADFRKYRSSDKFDVIVSNPPYFIDSLECPDRQRAAARH---------NDSLT-YDD 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLL 261
           + +GVS  L ++G  +V I  +    V +I   +KL+ V         GG   RVL+
Sbjct: 142 LLEGVSGLLTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|227498083|ref|ZP_03928256.1| methylase [Actinomyces urogenitalis DSM 15434]
 gi|226832521|gb|EEH64904.1| methylase [Actinomyces urogenitalis DSM 15434]
          Length = 220

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 12/197 (6%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+ +    + G    Q+++   +  D+         + R    E +  + G   F  + L
Sbjct: 31  DARALAEHLLGC---QILLSDGA--DEGFLAAYRALVARRTAREPLQHLTGRMWFRGLEL 85

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKG 124
                 F  RPETE++  +A+  +    E+      ++DL TG+GA+  A+  E P  + 
Sbjct: 86  VARPGVFIVRPETEVVAGAAIEAAGRVAERYGRAPVVVDLCTGSGAIAAAVAAEVPTARV 145

Query: 125 VGVDISCKALEIAKSNAV----TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            GV+++  A+  A+ N            + D   +   + ++G  DV+VSNPPY+ +  V
Sbjct: 146 TGVELADAAVAAARENCERVVPGRVRVVQADATAAATLAEMDGSVDVVVSNPPYVPAGGV 205

Query: 181 DCLGLEVRDFDPRISLD 197
           +    E    DP ++L 
Sbjct: 206 E--DPETALHDPGLALY 220


>gi|213028960|ref|ZP_03343407.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 85

 Score =  109 bits (273), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  + E I  + G R+F+++ L +S  T  PRP+TE LV+ ALA            RILD
Sbjct: 1   RRKQGEPIAYLTGLREFWSLPLFVSPATLIPRPDTECLVEQALARL-----PVKTCRILD 55

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           LGTGTGA+ LAL  E P  +   VD    A
Sbjct: 56  LGTGTGAIALALACERPDCEVTAVDRMPDA 85


>gi|326780899|ref|ZP_08240164.1| methylase [Streptomyces cf. griseus XylebKG-1]
 gi|326661232|gb|EGE46078.1| methylase [Streptomyces cf. griseus XylebKG-1]
          Length = 252

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 79/195 (40%), Gaps = 23/195 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL   ALA     I       +LDL TG+GA+ L   +     +   VD
Sbjct: 43  PGVYRPQTDTLLL---ALAMRREGI--GPGTDLLDLCTGSGALALHAARL--GARVTAVD 95

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           IS +A+  A+ N     +       + D   ++ G  FD +VSNPPY+ +  +      +
Sbjct: 96  ISRRAVASARLNTALARLP--VTVRRGDLLRALPGHTFDAVVSNPPYVPAPGLS-----L 148

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
             + P  S D G DG      I D  S  L   GL  + + G ++  + V    +    +
Sbjct: 149 PRYGPGRSWDAGPDGRVILDRICDDASAALRPGGLLLLVQSGLSRPEETVGRLSAAGFAV 208

Query: 247 VNAFKDYGGNDRVLL 261
                     DRV +
Sbjct: 209 SVT-------DRVTI 216


>gi|291435449|ref|ZP_06574839.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
 gi|291338344|gb|EFE65300.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
          Length = 228

 Score =  109 bits (273), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 15/158 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +TELL     A +L          +LD+GTG+G   LAL       +   VD
Sbjct: 18  PGVYAPQEDTELL-----AGALSDEPVPPGADVLDMGTGSG--ALALEAARRGTRVTAVD 70

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           +S +A+   + NA+  GV  R    + + F  V G  FD+I++NPPY+ +          
Sbjct: 71  VSWRAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPAPADGRPPRGA 128

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  + D G DG      I       L   G+  +
Sbjct: 129 AR-----AWDAGGDGRLVLDRICREAPAMLRPGGVLLL 161


>gi|297619901|ref|YP_003708006.1| methylase [Methanococcus voltae A3]
 gi|297378878|gb|ADI37033.1| methylase [Methanococcus voltae A3]
          Length = 223

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 26/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++      + P  ++ELL           ++      +LD+GTG+G   L+  K    
Sbjct: 11  DLKIKTHPKVYIPAEDSELL--------FNNLKDVKNKTVLDVGTGSGIQALSAFKNGAD 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSER--------FDTLQSDWFSSVEG----LFDVIV 169
           +  +GVDI+  A++ +  N   N   E            L SD F ++       FDVI+
Sbjct: 63  Y-VLGVDINPYAIKTSYDNLKLNFNIENSNNLETLKIRFLYSDLFENITKSKIKKFDVIL 121

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            N PY+ +   + L     ++    + DGG DG          + ++L K G+ 
Sbjct: 122 FNAPYLPTSEDEKLEK-YLNY----AFDGGSDGRKVLDKFIKELPKYLKKGGVV 170


>gi|237718552|ref|ZP_04549033.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293373068|ref|ZP_06619436.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC
           3f]
 gi|229452012|gb|EEO57803.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631954|gb|EFF50564.1| methyltransferase small domain protein [Bacteroides ovatus SD CMC
           3f]
          Length = 236

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L++ S P    V ++I   A+  A+ N + +   ER 
Sbjct: 32  WTSVESAHRILDIGTGTGLVALMLVQRSLPDANIVALEIDEAAVGQARENIIRSPWKERV 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+                      D L+ Y  
Sbjct: 92  EVVQADFRKYRSSDKFDVIVSNPPYFVDSLECPDRQRAAARH---------NDSLT-YED 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLL 261
           + +GVS  L ++G  +V I  +    V +I   +KL+ V         GG   RVL+
Sbjct: 142 LLEGVSGLLTENGFFTVVIPADVAERVKKIASIKKLYAVRQLNVITKPGGIPKRVLI 198


>gi|326472306|gb|EGD96315.1| hypothetical protein TESG_03768 [Trichophyton tonsurans CBS 112818]
 gi|326480519|gb|EGE04529.1| S-adenosylmethionine-dependentmethyltransferase [Trichophyton
           equinum CBS 127.97]
          Length = 370

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 71/199 (35%), Gaps = 36/199 (18%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP--R 92
           +  L   + +    + +  ILG + F ++ +        PR +TE          L   R
Sbjct: 56  KQRLQLLVRQRAAGKPLQYILGDQPFGDLTILCKEGVLIPRQDTESYTTRIAQRLLAENR 115

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN---- 144
           +     +RI+D+ TGTG + L L        P    +GVDIS  AL +AK N   N    
Sbjct: 116 LNPTKSIRIIDVCTGTGCIPLLLHSLLASSIPTISIIGVDISATALSLAKKNLEYNIRNG 175

Query: 145 ----GVSERFDTLQSDWFSS--------------------VEGLFDVIVSNPPYIESVIV 180
                  +    + +D                             D+++SNPPYI     
Sbjct: 176 TLLSRARDEIHFVHADILDPRYLESDGSELGKMLSRSNQGHSKGLDLLISNPPYISPRDF 235

Query: 181 --DCLGLEVRDFDPRISLD 197
                   VR ++P ++L 
Sbjct: 236 TNGTTRRSVRLYEPTLALV 254


>gi|239939498|ref|ZP_04691435.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239985987|ref|ZP_04706651.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
          Length = 255

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 23/195 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL   ALA     I       +LDL TG+GA+ L   +     +   VD
Sbjct: 46  PGVYRPQTDTLLL---ALAMRREGI--GPGTDLLDLCTGSGALALHAARL--GARVTAVD 98

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           IS +A+  A+ N     +       + D   ++ G  FD +VSNPPY+ +  +      +
Sbjct: 99  ISRRAVASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAPGLA-----L 151

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
               P  S D G DG      I D     L   GL  + + G ++  + V    +  L  
Sbjct: 152 PRHGPGRSWDAGPDGRVILDRICDDAFAALRPGGLLLLVQSGLSRPEETVGRLAAAGLDA 211

Query: 247 VNAFKDYGGNDRVLL 261
                     DRV +
Sbjct: 212 CVT-------DRVTI 219


>gi|219851215|ref|YP_002465647.1| methylase [Methanosphaerula palustris E1-9c]
 gi|219545474|gb|ACL15924.1| methylase [Methanosphaerula palustris E1-9c]
          Length = 188

 Score =  109 bits (272), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 86/192 (44%), Gaps = 29/192 (15%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +  L L+   ++P  +T LL   A + ++P        R+L++GTG+G V  AL     
Sbjct: 3   RSQTLFLNDQVYQPEADTLLLCRVACSTAMPDD------RVLEVGTGSGYVAAALKD--- 53

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               VG+DI+  A+  AK        +   + ++SD  +   G FD+I+ NPPY+ ++  
Sbjct: 54  CCTVVGLDINPHAVMAAK--------ARGVEVVRSDLCAGFRGPFDLILFNPPYLPTLPE 105

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYNQKVDVV 236
           + +   +       +LDGG+ G       A  V R L  +G   + I    GY+   +V 
Sbjct: 106 ERIDDWL-----EYALDGGLTGRDVIARFAAEVGRVLAPEGRILLLISSLTGYD---EVA 157

Query: 237 RIFESRKLFLVN 248
            IF      ++ 
Sbjct: 158 AIFTGLGFQIIR 169


>gi|295669049|ref|XP_002795073.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226285766|gb|EEH41332.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 534

 Score =  108 bits (271), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 19/146 (13%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           R  L   + +  +   +  ILG + F  + +        PRPETE        L+ S   
Sbjct: 153 RLRLREMVRQRARGVPLQYILGDQPFGELEILCQRGVLIPRPETESYTTRTANLLLSKFK 212

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           F     +    +RILDL TGTG + L     L    P  +  GVDIS +ALE+A+ N   
Sbjct: 213 FKSESDKHPPTLRILDLCTGTGCIPLLLHSLLAPAFPQLQICGVDISARALELARENLEH 272

Query: 144 N--------GVSERFDTLQSDWFSSV 161
           N                +  D  S +
Sbjct: 273 NIKLGVLSERARNEVSFIWGDVLSDL 298


>gi|91772906|ref|YP_565598.1| putative methylase [Methanococcoides burtonii DSM 6242]
 gi|91711921|gb|ABE51848.1| N5-glutamine methyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 202

 Score =  108 bits (271), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +  + L  + ++P  ++ LL D A+  +      +D + +L++G GTG V  A+L+ +
Sbjct: 6   YRDADIELDENVYDPAEDSYLLADVAIDVA------QDGMHVLEVGAGTGFVS-AVLQTN 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIES 177
                V  +IS  A E AK N          + +++D F     +  FD+I+ NPPY+ +
Sbjct: 59  VDVDLVATEISPFAAECAKRN--------SVEVIRADMFGCFGSDTKFDLILFNPPYLPT 110

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VV 236
              + +   +       + DGGIDG        +    +L+  G+  V I     +D V 
Sbjct: 111 AEDEKIPGWL-----NYAFDGGIDGREAVDRFLEEFPPYLSDGGIILVLISSLTGIDKVK 165

Query: 237 RIFESRKLFLVNAFKDYGGNDR 258
              + R L  V         DR
Sbjct: 166 MHMQGRGL-DVEV----CNIDR 182


>gi|254000255|ref|YP_003052318.1| methyltransferase small [Methylovorus sp. SIP3-4]
 gi|253986934|gb|ACT51791.1| methyltransferase small [Methylovorus sp. SIP3-4]
          Length = 331

 Score =  108 bits (270), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 14/178 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G    ++   TL + +    P+T   V +   ++  R  +  V R +D+GTG+G 
Sbjct: 106 VASLNGRLFLHSAYPTLEASSVFFGPDTYRFVRAVQQYAETR--QPTVRRAVDIGTGSGV 163

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             +AL    P  +  GVDI+  AL +A+ NA  NG  ER   L SD    V G FD+I++
Sbjct: 164 GAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMLHSDLLRDVAGEFDLIIA 222

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPY+    VD      R         GG  G     ++ D     L   G   +  G
Sbjct: 223 NPPYL----VDAAQRSYRH-------GGGALGAELSLSMVDAALTRLAPGGALVLYTG 269


>gi|325957946|ref|YP_004289412.1| methylase [Methanobacterium sp. AL-21]
 gi|325329378|gb|ADZ08440.1| methylase [Methanobacterium sp. AL-21]
          Length = 197

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 17/168 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  + +  + + +EP  +T L  ++        +E      +L++GTGTG + +   + 
Sbjct: 3   EYKGITIYTNEEVYEPAEDTFLFAEN--------LELNRKDDVLEIGTGTGLIAICASQN 54

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           S   K +  DI+  A++ A  N +T+  +   +  + + F  V E  FD+++ N PY+ +
Sbjct: 55  SR--KVIATDINEAAIKCALKNVITHR-AYNVELREGNLFEPVAEEKFDLVLFNTPYLPT 111

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              + L  ++       + DGG+DG        DGV   L K+G   +
Sbjct: 112 SEEEQLEGQI-----NTAFDGGLDGRETIDAFLDGVKDVLKKEGRIQM 154


>gi|111220018|ref|YP_710812.1| putative adenine-specific methylase [Frankia alni ACN14a]
 gi|111147550|emb|CAJ59203.1| Putative adenine-specific methylase (partial) [Frankia alni ACN14a]
          Length = 140

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 10/121 (8%)

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A+ N    G+       + D F+++     G  D++V N PY+ +  +  +  E R+ 
Sbjct: 2   RCARRNVAGGGL-----VHEGDLFAALPRTLRGRVDLLVVNAPYVPTDAIGLMPPEAREH 56

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +PR++LDGG DGL   R +       L   G    E    Q   +        L +V   
Sbjct: 57  EPRLALDGGTDGLDVLRRVVVDAPSWLAPGGSLLFETSAQQSPALADAVTQTGL-IVRIV 115

Query: 251 K 251
           +
Sbjct: 116 Q 116


>gi|126437784|ref|YP_001073475.1| putative methylase [Mycobacterium sp. JLS]
 gi|126237584|gb|ABO00985.1| putative methylase [Mycobacterium sp. JLS]
          Length = 231

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 9/157 (5%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             + P+ +++LL+D      L         R +DL TG+G V +    +         DI
Sbjct: 17  GVYAPQEDSQLLIDIMEKTGLAV-----GRRAVDLCTGSGVVAVNAALQGA-SSVTAFDI 70

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
             +A+  A+ NA   G     D     W  +VE   FD++  NPPY+             
Sbjct: 71  CPRAVRCARGNA--LGAGVDVDVHLGSWARAVEFDPFDLVTCNPPYVPHAPEADREPVPS 128

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              P  + D G DG      + + V   L   G   +
Sbjct: 129 SVGPARAWDAGYDGRMILDPLCEAVPDLLAPGGSLLL 165


>gi|323339961|ref|ZP_08080228.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
 gi|323092603|gb|EFZ35208.1| protein-(glutamine-N5) methyltransferase [Lactobacillus ruminis
           ATCC 25644]
          Length = 159

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 5/131 (3%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             +C         +++                 + +  +      +L    F+     ++
Sbjct: 30  MLICGQMDWDVTHLLMHYRDEFSKEDFEVFRQNVEKCAEGIPPQYVLSKAVFFKRTFFVN 89

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             T  PR ETE LV+  L               LD+GTG+GA+ L L  E P +KG+  D
Sbjct: 90  ESTLIPRVETEDLVEWIL-----HDNPGADAEFLDIGTGSGAIGLTLKAEKPLWKGMLSD 144

Query: 129 ISCKALEIAKS 139
           +S +ALE+AK 
Sbjct: 145 VSSEALEVAKK 155


>gi|229496584|ref|ZP_04390298.1| SmtA protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316481|gb|EEN82400.1| SmtA protein [Porphyromonas endodontalis ATCC 35406]
          Length = 256

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 11/164 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A++     +   +RILD+G GTG + L L +  P  +   ++I   A+E A  NA  +  
Sbjct: 42  AWASIDTREETPLRILDVGCGTGLIALMLAQRYPRAEVTALEIEPTAVERATYNAAQSPF 101

Query: 147 SERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           S R   +Q+D+  + + + L+D+IVSNPPY ++ +      EVR             G  
Sbjct: 102 SSRVRVVQADFSTWQAPQALYDLIVSNPPYYKNTLQAR--SEVRH-------TARAIGFL 152

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + +    S  L+  G+ ++   Y+Q  ++     ++ L  + 
Sbjct: 153 SPKEVLRRASALLSPQGVVALVTPYDQLEELRMFAFTQGLIPIR 196


>gi|296109907|ref|YP_003616856.1| methyltransferase small [Methanocaldococcus infernus ME]
 gi|295434721|gb|ADG13892.1| methyltransferase small [Methanocaldococcus infernus ME]
          Length = 196

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 69/192 (35%), Gaps = 41/192 (21%)

Query: 64  RLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +    S  F        T+LL+++         E      ILDLG G GA+ +AL  E  
Sbjct: 27  KFKTDSGVFSHNKIDKGTKLLIETV--------EVNKEDEILDLGCGYGAIGIALADEVK 78

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             K + VDI+ +AL++AK N   N +    +   SD + +V+  FD I++NPP       
Sbjct: 79  --KVLMVDINRRALKLAKENVKLNNIK-NAEVRFSDLYENVDEKFDKIITNPPIRA---- 131

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVRIF 239
                                G    + I      HL   G   + I   Q    + +  
Sbjct: 132 ---------------------GKDVVKKIVSEALNHLKDGGELWMVIQTKQGAKSMAKYM 170

Query: 240 ESRKLFLVNAFK 251
           E      V   K
Sbjct: 171 EEV-FGNVETVK 181


>gi|291442928|ref|ZP_06582318.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|291345875|gb|EFE72779.1| methyltransferase [Streptomyces roseosporus NRRL 15998]
          Length = 213

 Score =  107 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 23/195 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL   ALA     I       +LDL TG+GA+ L   +     +   VD
Sbjct: 4   PGVYRPQTDTLLL---ALAMRREGI--GPGTDLLDLCTGSGALALHAARL--GARVTAVD 56

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           IS +A+  A+ N     +       + D   ++ G  FD +VSNPPY+ +  +      +
Sbjct: 57  ISRRAVASARLNTALARLP--VTVRRGDLLRALPGRTFDAVVSNPPYVPAPGLA-----L 109

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
               P  S D G DG      I D     L   GL  + + G ++  + V    +  L  
Sbjct: 110 PRHGPGRSWDAGPDGRVILDRICDDAFAALRPGGLLLLVQSGLSRPEETVGRLAAAGLDA 169

Query: 247 VNAFKDYGGNDRVLL 261
                     DRV +
Sbjct: 170 CVT-------DRVTI 177


>gi|226294709|gb|EEH50129.1| hypothetical protein PADG_06208 [Paracoccidioides brasiliensis
           Pb18]
          Length = 474

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/121 (32%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           R  L   + +  +   +  ILG + F  + +        PRPETE        L+ S   
Sbjct: 89  RRRLREMVRQRARGVPLQYILGDQPFGELEILCRRGVLIPRPETESYTTRTANLLLSKFK 148

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           F     E    +RILDL TGTG + L     L    P  +  GVDIS +ALE+A+ N   
Sbjct: 149 FKSESQEHPPALRILDLCTGTGCIPLLLHSLLAPAFPQLQICGVDISARALELARENLEH 208

Query: 144 N 144
           N
Sbjct: 209 N 209


>gi|147788825|emb|CAN62344.1| hypothetical protein VITISV_010350 [Vitis vinifera]
          Length = 304

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 75/218 (34%), Gaps = 37/218 (16%)

Query: 4   LRDSHSFLCRVTGLSSH--QVIVDPDSV---LDDRQRFFLTNAIVRSLKHESIHRILGWR 58
            R+    L     + S   Q+    D     L        +    R  +      ++G  
Sbjct: 83  RRELKWLLEDALEVHSSVPQMGSHSDDRPIKLRTXLEQLYSVWRQRIEERRPFQYVVGCE 142

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK- 117
            + ++ L++      PRPETE+ VD          +    +   DLGTG+GA+ + + + 
Sbjct: 143 HWRDLVLSVQDGVLIPRPETEVFVDLVGDVVTQNGDLTQGL-WADLGTGSGAIAIGIGRI 201

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------------------ERF 150
             P  + +  D+S  A+ +A  N     +                            +  
Sbjct: 202 LGPRGRVIATDLSPVAVSVASFNVQRYSLQKAVVFLDGLRKGKLTYLTGLIEXKPGKDII 261

Query: 151 DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGL 185
           +  Q  WF  +   EG    +VSNPPYI S  +  L  
Sbjct: 262 EIRQGSWFEPLKDVEGKLSGLVSNPPYIPSDHISGLQP 299


>gi|85101730|ref|XP_961205.1| hypothetical protein NCU03816 [Neurospora crassa OR74A]
 gi|16944575|emb|CAC18256.2| conserved hypothetical protein [Neurospora crassa]
 gi|28922746|gb|EAA31969.1| predicted protein [Neurospora crassa OR74A]
          Length = 406

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 60/318 (18%), Positives = 103/318 (32%), Gaps = 99/318 (31%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---LLVDSALAFSLPR 92
             +     R  K   +  +LG + F ++ +        PR ETE   + + + L  SL  
Sbjct: 55  ARVWKLCDRRGKGLPLAYVLGNQPFGDLEIKCQPGVLIPRTETESYTIHLSNILRHSLSS 114

Query: 93  I------EKRDVVRILDLGTGTGAVCLALLKESPF------FKGVGVDISCKALEIAKSN 140
                  ++   + I+DL TGTG + L L  +            VGVDIS KA+ +++ N
Sbjct: 115 SKSESDPDQHQPLNIIDLCTGTGCIPLLLYSQLSRSLPLQSLNIVGVDISQKAINLSRQN 174

Query: 141 AVTNGVSERF----------------DTLQSDWFSSVE---------------------- 162
              N  + RF                   ++D FS                         
Sbjct: 175 LHHNLHAHRFPRPSSPRDKSHPQRLLHFHKADIFSPTSLDPILSTPSSSSTSSSSSSSSS 234

Query: 163 -----GLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLS------------ 204
                G +D++ SNPPYI  S         VR+++P+++L   ++ +             
Sbjct: 235 SSTGTGEWDLLTSNPPYISPSGFALSTSRSVRNWEPKLALVPPVERVDLHQKHFYDHWYY 294

Query: 205 -----------------HYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRI------FE 240
                             Y  + +    +        +E+G   Q   VV +        
Sbjct: 295 PDNEILLQTVEYQEEDVFYARLLEIARTY-RPK-RVLMEVGDMEQAKRVVGMVLGDGKLR 352

Query: 241 SRKLFLVNAFKDYGGNDR 258
                     +  GGN+R
Sbjct: 353 GLYFGNGEVTR--GGNER 368


>gi|303243768|ref|ZP_07330109.1| methylase [Methanothermococcus okinawensis IH1]
 gi|302486010|gb|EFL48933.1| methylase [Methanothermococcus okinawensis IH1]
          Length = 210

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 25/194 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +   S  +EP  ++ELL+D+        +       +LD+GTGTG   +  +K+   
Sbjct: 8   DILIKTHSKVYEPAEDSELLLDN--------LVNVKNKTVLDVGTGTGIQAINAIKKGAK 59

Query: 122 FKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVE--------GLFDVIVSN 171
              +GVD++  ++EIAK NA+ N +  +      +SD F +++          FDVI+ N
Sbjct: 60  I-VIGVDVNPYSIEIAKENALLNKLELNRNIFFFKSDLFKNMDEIMDKLNIKKFDVILFN 118

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            PY+ +   + L     ++    + DGGIDG          VS +L ++G+  +      
Sbjct: 119 APYLPTSEEEKLEK-YLNY----AFDGGIDGRQVLDRFIHKVSHYLEENGIIQIVQSSLT 173

Query: 232 KVD-VVRIFESRKL 244
             +  + + +    
Sbjct: 174 GEEKTLTLLKKHGF 187


>gi|312866013|ref|ZP_07726234.1| methyltransferase small domain protein [Streptococcus downei F0415]
 gi|311098417|gb|EFQ56640.1| methyltransferase small domain protein [Streptococcus downei F0415]
          Length = 196

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 76/198 (38%), Gaps = 37/198 (18%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG  DF+       +  F     ++ ++D      L  +       +LDLG G G + +
Sbjct: 23  LLGE-DFH---FYTDAGVF-----SKKMIDYGSQALLSVLNFSAGQSLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +ALE+A+ NA  NGV    DT QS+ +  V+G FD I+SNPP
Sbjct: 74  SLAK-VQNLKVTMVDINQRALELAQKNAKRNGVE--VDTYQSNIYDQVKGQFDQIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +G   HL   G  +  I   Q  
Sbjct: 131 IRA-------------------------GKRVVHDILEGAYDHLKPGGSLTTVIQKKQGA 165

Query: 234 DVVRIFESRKLFLVNAFK 251
              +   ++    V   K
Sbjct: 166 PSAKAKMAQVFGNVEVVK 183


>gi|328886748|emb|CCA59987.1| possible methyltransferase [Streptomyces venezuelae ATCC 10712]
          Length = 240

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 59/158 (37%), Gaps = 15/158 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL          R E R   R LDL TGTG + L         +   VD
Sbjct: 31  PGVYAPQADTGLLAAHV-----RREELRPGARSLDLCTGTGVLALVAALR--GARATAVD 83

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           IS  A+ +A+ NA  +    R  TL  D    V    FD++  NPPY+ S          
Sbjct: 84  ISRTAIAVARLNARLHRC--RIRTLCGDLDGPVAHERFDLVTVNPPYVPSADAQTPSRGA 141

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R      S D G DG      I       L   G+  +
Sbjct: 142 RR-----SWDAGTDGRLLLDRICSRAPSFLAPSGVLLI 174


>gi|318058889|ref|ZP_07977612.1| hypothetical protein SSA3_13145 [Streptomyces sp. SA3_actG]
          Length = 213

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 10/157 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL     A +L          +LDL TG+G   LALL      +    D+S 
Sbjct: 2   YAPQADTHLL-----ARALGTEPIGPHTHVLDLCTGSG--ALALLAARRGARVCATDLSW 54

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A+  A+ NA   G  +R   L+ D    V G  FD++VSNPPY+            R  
Sbjct: 55  RAVVSARINAARAG--QRVRVLRGDLSGPVRGQRFDLVVSNPPYVPDPAARTGPRRGRSH 112

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              ++ D G  G      +       L+  G+  +  
Sbjct: 113 AASLAWDAGPGGRHLVDRVCAHAGDVLSPRGVLLLVH 149


>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 31/214 (14%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
            ++ +EP  ++  LVD+ LA     +E    +  +++G G+G    ++ L L +E     
Sbjct: 733 HNEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEIGCGSGYVITSLALILGQEGSGVN 791

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A+++ +     +GV        + S   + + G+ DV+V NPPY+ +   +
Sbjct: 792 YIATDINPHAVKVTRETIEAHGVDAELIITDIASGLENRLAGMIDVMVVNPPYVPTPEAE 851

Query: 182 CLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------EI---- 227
                    +   +   GG +G S    I       L++ G   +         EI    
Sbjct: 852 V------GSEGITASWAGGENGRSVIDRILPVADALLSEKGWLYMVTLTANNPSEICLEM 905

Query: 228 ---GYNQKVDVVRIFESRKLFLVNAFKDY-GGND 257
              GY  K+ V R  E   L ++  ++D   G D
Sbjct: 906 RKKGYTSKIVVQRSTEEESLHIIKFWRDLDNGLD 939


>gi|83771635|dbj|BAE61765.1| unnamed protein product [Aspergillus oryzae]
          Length = 364

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 88/260 (33%), Gaps = 58/260 (22%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  L +      K   +  ILG + F  + +        PR ETE          L  ++
Sbjct: 63  RRLLRSMCHARSKGMPLQYILGDQPFGELDILCEKGVLIPRAETEAFTIQTAKLILNNVQ 122

Query: 95  KRDV---------VRILDLGTGTGAVCLALLKESP----FFKGVGVDISCKALEIAKSNA 141
           K            +RI+DL TG+G + L L             +GVD+S  A+ +A  N 
Sbjct: 123 KHGRHEAGQQQRSLRIVDLCTGSGCIGLLLHALLAPHIDQLSILGVDLSPAAIALANKNL 182

Query: 142 VTNGVS-------------ERFDTLQSD----------------WFSSVEGLFDVIVSNP 172
             N                +R + L  D                  S +E   DV++SNP
Sbjct: 183 AHNIQRGLLLNRAATEVSFQRGNVLPHDSSGLPSAREVLCNHQGLPSEIEPKCDVLISNP 242

Query: 173 PYIESVIV--DCLGLEVRDFDPRISLD---GGID-GLS-------HYRTIADGVSRHLNK 219
           PYI             VR F+P+++L    G    GL         Y  I     +   K
Sbjct: 243 PYISPESFRDGTTSRSVRVFEPKLALVPPLGDSIMGLGHDRQEDLFYYHIILLSFQVRTK 302

Query: 220 DGLCSVEIGY-NQKVDVVRI 238
             L  +E G  +Q   V  I
Sbjct: 303 --LLVLECGDRSQATRVAAI 320


>gi|313202221|ref|YP_004040879.1| methyltransferase small [Methylovorus sp. MP688]
 gi|312441537|gb|ADQ85643.1| methyltransferase small [Methylovorus sp. MP688]
          Length = 331

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 14/178 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           +  + G    ++   TL + +    P+T   + +   ++  +  +  V R +D+GTG+G 
Sbjct: 106 VASLNGQLFLHSAYPTLEASSVFFGPDTYRFIRAVQQYA--QTRQPTVRRAVDIGTGSGV 163

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             +AL    P  +  GVDI+  AL +A+ NA  NG  ER   + SD    V G FD+I++
Sbjct: 164 GAIALAGLFPDAEVFGVDINPHALALARVNAAANGC-ERVQMVHSDLLQDVAGEFDLIIA 222

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPY+    VD      R         GG  G     ++ D     L   G   +  G
Sbjct: 223 NPPYL----VDAAQRSYRH-------GGGALGAELSLSMVDAAMARLAPGGALVLYTG 269


>gi|295395537|ref|ZP_06805731.1| methylase of polypeptide chain release factors [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971556|gb|EFG47437.1| methylase of polypeptide chain release factors [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 534

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/168 (29%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 62  NVRLTLSSDTF---EPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++ L     T    EP     +L V  A    L    +  V   LDLGTG G   +AL +
Sbjct: 132 HIWLFSDHGTLVRDEPVAGDFVLGVGGAGRTLLNITPRTPVHTALDLGTGCGIQAIALAR 191

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                  +  DIS +AL   ++NA  NG +   +T +   F      FD+IVSNPP++ +
Sbjct: 192 HCD--HVIATDISARALAFTRANATLNG-AHNIETREGSLFEPTPEQFDLIVSNPPFVIT 248

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  LE R        DGG  G    RT+   +  HL   G   +
Sbjct: 249 PQGHTATLEYR--------DGGHTGDQLMRTLLAQLPNHLTTSGTACL 288


>gi|48477307|ref|YP_023013.1| methyltransferase [Picrophilus torridus DSM 9790]
 gi|48429955|gb|AAT42820.1| methyltransferase [Picrophilus torridus DSM 9790]
          Length = 182

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 26/163 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +  + D + P  +T L++D+           +   ++L++G GTG + + L   +   
Sbjct: 1   MDIKYNDDVYRPAEDTYLMMDNI----------KCGKKVLEIGAGTGIISVNLALNNHD- 49

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DI  KA+++ K NA  N V      ++SD F ++   +D I+ NPPY+     D 
Sbjct: 50  -VTATDIDDKAIDLIKENARINHV--NIKIIKSDLFDNIYDKYDTIIFNPPYLPVENED- 105

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      I   GG DG +           HLN +G   +
Sbjct: 106 -----------IKWSGGSDGFNVTSRFLKDAYMHLNDNGSIYI 137


>gi|240277076|gb|EER40586.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 454

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 80/222 (36%), Gaps = 59/222 (26%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           +  L   + R  +   +  ILG + F  + +        PRPETE        L+ S LA
Sbjct: 85  QSRLREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLA 144

Query: 88  FSLP---------RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKAL 134
            +           + E    +RI+DL TGTG + L L        P  +   VDIS +AL
Sbjct: 145 PTRQKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRAL 204

Query: 135 EIAKSNAVTN--------GVSERFDTLQSDWFSSVEGL---------------------- 164
           ++A+ N   N           E    ++ D  S +  L                      
Sbjct: 205 KLARENLKHNIALGMLSERAREEVSFVKGDVLSGLSELSGLCSSSVTPASKTAAAAAAAA 264

Query: 165 -------FDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLD 197
                    +++SNPPYI             VR ++PR++L 
Sbjct: 265 EPEINPVITILLSNPPYISPAQFANGTTARSVRRYEPRLALV 306


>gi|302556027|ref|ZP_07308369.1| methyltransferase [Streptomyces viridochromogenes DSM 40736]
 gi|302473645|gb|EFL36738.1| methyltransferase [Streptomyces viridochromogenes DSM 40736]
          Length = 217

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +    + P+ +TELL  +     LP         +LD+GTGTG   LAL      F    
Sbjct: 5   VPPGVYAPQEDTELLAGALFDEPLPT-----GAAVLDVGTGTG--ALALEAARRGFDVTA 57

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
           VD+S +A+  A+ NA   G+  R      + F  V G  FD+I++NPPY+ +        
Sbjct: 58  VDVSRRAVWAARLNAARAGLLVRIR--HGNLFDPVLGESFDLILANPPYVPAPGGTRQPR 115

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    + D G DG      I       L   G+  +
Sbjct: 116 GAAR-----AWDAGDDGRLVVDRICREAPGLLRPGGVLLL 150


>gi|237713238|ref|ZP_04543719.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406622|ref|ZP_06083171.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646172|ref|ZP_06723828.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a]
 gi|294807858|ref|ZP_06766640.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|229446705|gb|EEO52496.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355325|gb|EEZ04416.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638501|gb|EFF56863.1| methyltransferase domain protein [Bacteroides ovatus SD CC 2a]
 gi|294444920|gb|EFG13605.1| methyltransferase domain protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 236

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 17/178 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P  K V ++I   A E A+ N   +   ER 
Sbjct: 32  WASVERARRILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAEQARENVARSPWQERI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+                      D L+ Y  
Sbjct: 92  EVVQADFKKYRSSDKFDVIVSNPPYFVDSLECPDRQRAAARH---------NDSLT-YEE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLLF 262
           + +GV+R L  DGL +V I  +    V  I    KL+ +         GG   R L+ 
Sbjct: 142 LLEGVNRLLAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGGIPKRTLIA 199


>gi|299752052|ref|XP_002911717.1| modification methylase [Coprinopsis cinerea okayama7#130]
 gi|298409656|gb|EFI28223.1| modification methylase [Coprinopsis cinerea okayama7#130]
          Length = 252

 Score =  106 bits (266), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 63/140 (45%), Gaps = 22/140 (15%)

Query: 102 LDLGTGTGAVCLALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDT------- 152
           LDLGTG+G + L L +  P       GVDIS  AL +A  NA   G+  R D+       
Sbjct: 30  LDLGTGSGCIPLLLCRLWPQGSLSATGVDISPHALSLANENAALCGIPPRSDSMTPRNTF 89

Query: 153 ---LQSDWFSSVEGLF-------DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              L +   +   G         D+++SNPPYI       L   V +F+   +L GG  G
Sbjct: 90  RTSLANFLANDFPGTHLSSALPIDILISNPPYIPWDEYLELPESVVNFEDPKALFGGPSG 149

Query: 203 LSHYRTIADGVSRHLNKDGL 222
           L HY  IA  ++R     G+
Sbjct: 150 LEHYEAIARLLTR---PGGI 166


>gi|46124879|ref|XP_386993.1| hypothetical protein FG06817.1 [Gibberella zeae PH-1]
          Length = 288

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 38/208 (18%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL----ALLKESPFFKGVGVDISCKALEI 136
           LV S         E    V ++D  TGTG + L    +L          GVDIS  AL +
Sbjct: 39  LVKSGQLLGQQVRENGHGVNLIDFCTGTGCIPLGFFSSLQHSVQNMTVRGVDISPVALRL 98

Query: 137 AKSNAVTN---------GVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVD 181
           A+ N   N           ++R D   ++ FS  +        +D++VSNPPYI   +  
Sbjct: 99  AQENIARNVELQKLIKPTRNKRLDITTANVFSDSDMQQLAVTRWDILVSNPPYISEDVWH 158

Query: 182 ----CLGLEVRDFDPRISLD--------GGIDGLS-HYRTIADGVSRHLNKDGLCSVEIG 228
                LG  VR ++PR++L          G +     Y  + D +S  L    +  +EIG
Sbjct: 159 HGRGQLGYSVRKYEPRLALVPTNNLPCPSGCNAADVFYARLLD-ISELLKPT-VVLLEIG 216

Query: 229 -YNQKVDVVRIFESRKLFL---VNAFKD 252
             +Q   V++++ S  +     V  ++D
Sbjct: 217 DEDQARRVLQLYFSHPIAQSSRVEVWRD 244


>gi|29346248|ref|NP_809751.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338143|gb|AAO75945.1| putative RNA methyltransferase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 241

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +   RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R 
Sbjct: 36  WASVQGAHRILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRI 95

Query: 151 DTLQSD-WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + ++ D  F      FDVIVSNPPY ++S+        +             D L+ Y  
Sbjct: 96  EVVKQDFLFYQSPDKFDVIVSNPPYFVDSLSCPDQQRSMARH---------NDSLT-YEK 145

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGND-RVLL 261
           +  GV+  L K+G  ++ I  +    V        L+    +N     GG   R+L+
Sbjct: 146 LLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYHLYATRQLNVITKPGGTPKRMLI 202


>gi|262831401|sp|Q8A9H7|TRMN6_BACTN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +   RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R 
Sbjct: 32  WASVQGAHRILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRI 91

Query: 151 DTLQSD-WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + ++ D  F      FDVIVSNPPY ++S+        +             D L+ Y  
Sbjct: 92  EVVKQDFLFYQSPDKFDVIVSNPPYFVDSLSCPDQQRSMARH---------NDSLT-YEK 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGND-RVLL 261
           +  GV+  L K+G  ++ I  +    V        L+    +N     GG   R+L+
Sbjct: 142 LLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYHLYATRQLNVITKPGGTPKRMLI 198


>gi|296242613|ref|YP_003650100.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM
           11486]
 gi|296095197|gb|ADG91148.1| 16S rRNA m(2)G 1207 methyltransferase [Thermosphaera aggregans DSM
           11486]
          Length = 192

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 30/168 (17%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +  T+   TFE    T L     VD      L  ++      +LD+G G G + + L K 
Sbjct: 15  IPFTIHGHTFEFLSYTSLFSGKQVDEGTRLLLENVKTPVEGEVLDVGCGYGVIGIVLAKL 74

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +P  +    D++  A++ A+ NA  NGV +R   LQ D +  V+   F+ I SNP     
Sbjct: 75  NPRLRVYMTDVNPLAVKTAQHNAELNGVGDRVVILQGDRYEPVKDKVFNAIYSNP----- 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                         P  +      G+     I  G   HL   G    
Sbjct: 130 --------------PLSA------GMRIVEEIVLGARDHLAPGGFAQF 157


>gi|226327942|ref|ZP_03803460.1| hypothetical protein PROPEN_01823 [Proteus penneri ATCC 35198]
 gi|225203646|gb|EEG86000.1| hypothetical protein PROPEN_01823 [Proteus penneri ATCC 35198]
          Length = 120

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R  +   +  +     F      +      PR     L+++     + +    +  RILD
Sbjct: 10  RIEQKIPVPYLTHSAWFCGHEFYVDERVLIPRSPIGELINNHFDGLIQQ----EPTRILD 65

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           L TG+G + +A   E    +   VDIS  ALE+A+ N   
Sbjct: 66  LCTGSGCIAIACAHEFEEAEVDAVDISGDALEVAEFNIEK 105


>gi|163851886|ref|YP_001639929.1| methyltransferase small [Methylobacterium extorquens PA1]
 gi|163663491|gb|ABY30858.1| methyltransferase small [Methylobacterium extorquens PA1]
          Length = 340

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D+    P+T    ++ LA    R         R+ D+G G+GA  + + K  P  + 
Sbjct: 126 LAADSVFFGPDTMRFAEAVLAHLEERARAGHPAPRRVADIGCGSGAAGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA   GV      + SD  S+VEG FD+IVSNPP++    VD  G
Sbjct: 186 VLVDINPAALRAARINARLAGVG-NVRPVHSDMLSNVEGSFDLIVSNPPFM----VDSGG 240

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG  G      + +  +  L   G   +  G
Sbjct: 241 RAYRH-------GGGPLGAGLSLRVVEAATERLAPGGSLVLFTG 277


>gi|229153879|ref|ZP_04282009.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342]
 gi|228629560|gb|EEK86257.1| hypothetical protein bcere0010_860 [Bacillus cereus ATCC 4342]
          Length = 199

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTL--SSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T       F   E    + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFTLRGSRFTFLSDRGVFSKNEVDFGSRLLIE---AFQVPDIKGD----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    K   VD++ +ALE+AK NA  N V       QS  + +V+G++  I+
Sbjct: 71  PIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRVG-NVHIFQSSIYENVDGMYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    HL   G   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEHLVPGGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|158148277|emb|CAP12595.1| ElmF protein [Streptomyces olivaceus]
          Length = 399

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 44/266 (16%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR----------- 53
           R + +F  RV   SS  V VD  +VL  R+   + +A         + R           
Sbjct: 96  RQAQAFRSRVL--SSLLVPVDEGAVLALRRAPDIRDACAE--AGCPLDRPFVCSLHALLG 151

Query: 54  ILGWRDFYNVRLTL--------SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           + G R++    + +                P+    VD     +LP    R +V   D+G
Sbjct: 152 MTGAREWRRKGVEVPALGGARIHPRYGVFAPQRGEYVDLVARATLPDTGARPLVAF-DIG 210

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TGTG +  A+L      + V  D++ +AL  A+ N    G++ER   +++D F       
Sbjct: 211 TGTGVLA-AVLARRGVPEVVATDLNPRALACARENLDRLGLAERVTVMEADLFPP-RRRA 268

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LC 223
            ++V NPP++ +     L   V  +DP         G    R   + + RHL   G    
Sbjct: 269 SLVVCNPPWLPAKPTSELESAV--YDP---------GGRMLRAFLERLPRHLEPGGEAWL 317

Query: 224 SV----EI-GYNQKVDVVRIFESRKL 244
            +    E  G   + +++ +F    L
Sbjct: 318 VLSDLAEHLGLRSREELLGLFAESGL 343


>gi|322696274|gb|EFY88069.1| hypothetical protein MAC_05933 [Metarhizium acridum CQMa 102]
          Length = 278

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 62/227 (27%), Positives = 90/227 (39%), Gaps = 45/227 (19%)

Query: 69  SDTFEPRPET----ELLVDSALAFSL---PRIEKRDVVRILDLGTGTGAVCLALL----K 117
           S    PRPET      LVD      L      +    + I+DL TGTG + L L      
Sbjct: 10  SGVLIPRPETEAYTYHLVDLIKTGELLGSKSSDDNAELSIVDLCTGTGCIPLLLYTLLQS 69

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---------DTLQSDWFSSVE------ 162
                +  GVDIS +A+ +AK N   N               D L+ D F   +      
Sbjct: 70  SFQRLRVRGVDISPQAVGLAKLNVYHNAKLGNIATSQPGQKLDILRGDIFKDQDVAPIAQ 129

Query: 163 GLFDVIVSNPPYIESVIVD----CLGLEVRDFDPRISLDGGID-----GLS----HYRTI 209
              D++VSNPPY+     D     LG  VR ++PR++L    D     G       Y  +
Sbjct: 130 TPCDILVSNPPYVSQKAWDFGQGLLGCSVRKYEPRLALVPNHDLPVPTGWLHEDVFYSRL 189

Query: 210 ADGVSRHLNKDGLCSVEIGYN-QKVDVV-RIFESR--KLFLVNAFKD 252
            D     L    +  +E+G   Q   V+ R+F+ R  +  +V  ++D
Sbjct: 190 LDIA-MLLKPR-VVLLELGEESQARRVLGRLFQHRVAEFAMVEVWRD 234


>gi|307325284|ref|ZP_07604487.1| methylase [Streptomyces violaceusniger Tu 4113]
 gi|306889088|gb|EFN20071.1| methylase [Streptomyces violaceusniger Tu 4113]
          Length = 237

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 16/182 (8%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
                  + P+ +T       LA +L R +      +LD+GTG+GA+ L +       + 
Sbjct: 23  FKTPPGVYAPQDDT-----WMLAEALLREDITAGTAVLDVGTGSGALAL-VAAGRGAAQV 76

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+S  A+      A   G+  R   L  D  + V G  FD+IV+NPPY+        
Sbjct: 77  TAVDVSPLAVGATWLRARLKGLPVRV--LHGDLLTPVAGRGFDLIVANPPYVPVAGRRAR 134

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESR 242
                 +        G DG +    I       L   G+  +           +    + 
Sbjct: 135 RGRGLAW------RAGADGRAVLDRICRDAPPLLRPGGVLLLVHSALSGTERTLAQLTAS 188

Query: 243 KL 244
            L
Sbjct: 189 GL 190


>gi|255607375|ref|XP_002538718.1| methyltransferase, putative [Ricinus communis]
 gi|223510766|gb|EEF23665.1| methyltransferase, putative [Ricinus communis]
          Length = 206

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 20/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT+ +  + PR  +    +                 +L+LG G+G   L LL     +
Sbjct: 1   MELTVPAGVYAPRAGSST--EFVSRNWWAAHLDEARGSLLELGAGSG--ALTLLAARQGW 56

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVD 181
           +  G DI   A+  A+ NA  NG+    +  QSD F + +G  FDVI+ N PY       
Sbjct: 57  RATGADIDGAAVSSAQENAARNGIEA--EFRQSDLFEAFKGERFDVILFNQPYFHK---- 110

Query: 182 CLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +V++ +  ++ L+G        + + D  +RHLN  G    
Sbjct: 111 ---PDVQNHERALADLNG-----RLTQRMLDEAARHLNPGGRLVF 147


>gi|251799654|ref|YP_003014385.1| methyltransferase small [Paenibacillus sp. JDR-2]
 gi|247547280|gb|ACT04299.1| methyltransferase small [Paenibacillus sp. JDR-2]
          Length = 201

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 51/206 (24%), Positives = 76/206 (36%), Gaps = 35/206 (16%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y++R    +  F         VD      L  +      ++LD+G G G + L   K +P
Sbjct: 26  YSLRFMTDAGVFSKSG-----VDYGSRVLLDALVLAPSAQVLDVGCGYGPIGLTAAKLAP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                 +DI+ +A+E++K NA  NGVS     +QSD + SV+   +DVI++NPP      
Sbjct: 81  EGHVTMIDINERAVELSKENAKLNGVS-NVTIVQSDIYESVKNNRYDVILTNPPIRA--- 136

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G      I +     LN  G   V I   Q        
Sbjct: 137 ----------------------GKQVVHRIFEEGYNLLNPGGKMWVVIQKKQGAPSAEAK 174

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            ES    +    KD G   R+ L  +
Sbjct: 175 LESLFGDVEEVTKDKG--YRIFLATK 198


>gi|332969350|gb|EGK08375.1| methyltransferase domain protein [Kingella kingae ATCC 23330]
          Length = 367

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 29/188 (15%)

Query: 65  LTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           + +    F P R E   LV  A     P++        +D+GTG+G + + L K     +
Sbjct: 162 IHVPFGVFSPIRGEYVDLVAKAACTFAPQLA-------MDVGTGSGVLAVVLAKAG-VAQ 213

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D + +A+E A+ N    G + R + +Q+D F+  +   D+IV NPP++ +     +
Sbjct: 214 VWATDNNPRAIECARQNVARLGYAARIEIVQTDLFA--DECVDLIVCNPPWLPARPTSAI 271

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------EI-GYNQKVDVV 236
             E   +D R +             + +G + HLN  G   +      E  G  Q  D+ 
Sbjct: 272 --ETALYDERHA---------MLHALLNGAAAHLNAGGQLWIVMSDLAEHLGLRQTDDLN 320

Query: 237 RIFESRKL 244
             F     
Sbjct: 321 NWFAQAGW 328


>gi|52145117|ref|YP_081712.1| methyltransferase [Bacillus cereus E33L]
 gi|51978586|gb|AAU20136.1| conserved hypothetical protein; possible methyltransferase
           [Bacillus cereus E33L]
          Length = 199

 Score =  105 bits (264), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILENAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|293375381|ref|ZP_06621662.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325844450|ref|ZP_08168177.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
 gi|292645934|gb|EFF63963.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325489124|gb|EGC91508.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
          Length = 197

 Score =  105 bits (263), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 36/176 (20%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +R T     F        + LLV++   F+ P I       ILD+G G G + L+L K
Sbjct: 24  HKLRFTTDVGVFSKGDVDFGSRLLVET---FAEPEISGN----ILDVGCGYGPIGLSLAK 76

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P      VD++ +ALE+AK NA+ NGV E     +S  +  V+  F  I+SNPP    
Sbjct: 77  SYPNRNVHMVDVNQRALELAKKNAMNNGV-ENVMIYESHCYEGVDDRFAAILSNPPIRA- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                   G      I +    +L ++G   + I   Q  
Sbjct: 135 ------------------------GKKVVHAIIEEAKEYLVENGELWIVIQKKQGA 166


>gi|305662621|ref|YP_003858909.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
 gi|304377190|gb|ADM27029.1| methyltransferase small [Ignisphaera aggregans DSM 17230]
          Length = 198

 Score =  105 bits (262), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 36/208 (17%)

Query: 47  KHESIHRILGWRDFYNV--RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
           K+ S   +L       +     +    F  R      +D      +  +E     R+LDL
Sbjct: 9   KNRSSQYMLISDYIRGLTVEFEVIPGLFSYRQ-----IDEGTRLLIENLEIPSEGRVLDL 63

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG 163
           G G GA+ + +   +P  +   VDI+ +A+ +A+ N + N +  +R    Q + +  V+ 
Sbjct: 64  GCGYGAIGIVVALLNPKLEVYMVDINREAVRLAERNVIRNKIDPQRIKIFQGNLYEPVKD 123

Query: 164 -LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            LF+ I SNPPY                           G      +     +HL   G+
Sbjct: 124 ILFNAIYSNPPYSA-------------------------GSQVIEELITQAPQHLKTAGI 158

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             + +       V ++ +      V   
Sbjct: 159 IQI-VARKGAEKVYKLMKET-FGNVETV 184


>gi|30260292|ref|NP_842669.1| ybxB protein [Bacillus anthracis str. Ames]
 gi|47525356|ref|YP_016705.1| methyltransferase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183135|ref|YP_026387.1| ybxB protein [Bacillus anthracis str. Sterne]
 gi|65317558|ref|ZP_00390517.1| COG2813: 16S RNA G1207 methylase RsmC [Bacillus anthracis str.
           A2012]
 gi|165873340|ref|ZP_02217942.1| ybxB protein [Bacillus anthracis str. A0488]
 gi|167636698|ref|ZP_02394985.1| ybxB protein [Bacillus anthracis str. A0442]
 gi|167642036|ref|ZP_02400265.1| ybxB protein [Bacillus anthracis str. A0193]
 gi|170689708|ref|ZP_02880884.1| ybxB protein [Bacillus anthracis str. A0465]
 gi|170709437|ref|ZP_02899844.1| ybxB protein [Bacillus anthracis str. A0389]
 gi|177656135|ref|ZP_02937162.1| ybxB protein [Bacillus anthracis str. A0174]
 gi|190569398|ref|ZP_03022285.1| ybxB protein [Bacillus anthracis Tsiankovskii-I]
 gi|227812774|ref|YP_002812783.1| ybxB protein [Bacillus anthracis str. CDC 684]
 gi|228983356|ref|ZP_04143569.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229602055|ref|YP_002864752.1| ybxB protein [Bacillus anthracis str. A0248]
 gi|254684395|ref|ZP_05148255.1| ybxB protein [Bacillus anthracis str. CNEVA-9066]
 gi|254720822|ref|ZP_05182614.1| ybxB protein [Bacillus anthracis str. A1055]
 gi|254733744|ref|ZP_05191459.1| ybxB protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254739413|ref|ZP_05197113.1| ybxB protein [Bacillus anthracis str. Kruger B]
 gi|254751214|ref|ZP_05203252.1| ybxB protein [Bacillus anthracis str. Vollum]
 gi|254756813|ref|ZP_05208841.1| ybxB protein [Bacillus anthracis str. Australia 94]
 gi|30253613|gb|AAP24155.1| ybxB protein [Bacillus anthracis str. Ames]
 gi|47500504|gb|AAT29180.1| ybxB protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177062|gb|AAT52438.1| ybxB protein [Bacillus anthracis str. Sterne]
 gi|164710920|gb|EDR16495.1| ybxB protein [Bacillus anthracis str. A0488]
 gi|167510002|gb|EDR85419.1| ybxB protein [Bacillus anthracis str. A0193]
 gi|167527872|gb|EDR90699.1| ybxB protein [Bacillus anthracis str. A0442]
 gi|170125654|gb|EDS94574.1| ybxB protein [Bacillus anthracis str. A0389]
 gi|170666333|gb|EDT17120.1| ybxB protein [Bacillus anthracis str. A0465]
 gi|172079855|gb|EDT64967.1| ybxB protein [Bacillus anthracis str. A0174]
 gi|190559491|gb|EDV13489.1| ybxB protein [Bacillus anthracis Tsiankovskii-I]
 gi|227007229|gb|ACP16972.1| ybxB protein [Bacillus anthracis str. CDC 684]
 gi|228776346|gb|EEM24699.1| hypothetical protein bthur0001_870 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229266463|gb|ACQ48100.1| ybxB protein [Bacillus anthracis str. A0248]
          Length = 199

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTL--SSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T       F   E    + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFTLRGSRFTFLSDRGVFSKNEVDFGSRLLIE---AFQVPDIKGD----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    K   VD++ +ALE+AK NA  N +       QS  + +V+G++  I+
Sbjct: 71  PIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRIG-NVHIFQSSVYENVDGMYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    HL   G   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEHLVPGGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|325095018|gb|EGC48328.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 505

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/222 (23%), Positives = 80/222 (36%), Gaps = 59/222 (26%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETEL-------LVDSALA 87
           +  L   + R  +   +  ILG + F  + +        PRPETE        L+ S LA
Sbjct: 85  QSRLREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLA 144

Query: 88  FSLP---------RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKAL 134
            +           + E    +RI+DL TGTG + L L        P  +   VDIS +AL
Sbjct: 145 PTRQKDLTHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICAVDISTRAL 204

Query: 135 EIAKSNAVTN--------GVSERFDTLQSDWFSSVEGL---------------------- 164
           ++A+ N   N           E    ++ D  S +  L                      
Sbjct: 205 KLARENLKHNIALGMLSERAREEVSFVKGDVLSGLSELSGLCSSSVTPASKTAAAAAAAA 264

Query: 165 -------FDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLD 197
                    +++SNPPYI             VR ++PR++L 
Sbjct: 265 EPEINPVITILLSNPPYISPAQFANGTTARSVRGYEPRLALV 306


>gi|311748643|ref|ZP_07722428.1| putative transferase [Algoriphagus sp. PR1]
 gi|126577169|gb|EAZ81417.1| putative transferase [Algoriphagus sp. PR1]
          Length = 236

 Score =  105 bits (262), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 18/201 (8%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G   F   +  +  D    +   ++  D+ L   L   E     RILD+GTGTG + L 
Sbjct: 1   MGQTWFQFQQFKVHQD----QCAMKISTDAVLMGGLVHGENPH--RILDVGTGTGVIALM 54

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPP 173
           L +         V++  KA E AKSN   +  S R    + ++ S   +  FD+IVSNPP
Sbjct: 55  LAQRYRESFLTAVELDEKAAEQAKSNFKESPFSNRMKLWKGEFQSYQSDEKFDMIVSNPP 114

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           Y    +        +D     +L    D LS  + +    S  + +DG   V +   Q  
Sbjct: 115 YFPDHLK------AKDSQRNQAL--HTDALSF-KDLVSKASSLITEDGNFWVILPPRQMQ 165

Query: 234 DVVRIFESRKLFLVN--AFKD 252
           D ++I E     ++     +D
Sbjct: 166 DFIQITEEVGFHIIEKLTVQD 186


>gi|257054787|ref|YP_003132619.1| methylase of polypeptide chain release factors [Saccharomonospora
           viridis DSM 43017]
 gi|256584659|gb|ACU95792.1| methylase of polypeptide chain release factors [Saccharomonospora
           viridis DSM 43017]
          Length = 227

 Score =  104 bits (261), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/209 (27%), Positives = 87/209 (41%), Gaps = 38/209 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++   + +  +     P +ELL  + L       E R   R+LD+GTG+G   +    E+
Sbjct: 30  YFGRSIVVPPEVMPLTPVSELLGGAVLD------EVRVGDRVLDMGTGSGVNAVLAAAEA 83

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                + VDI+ KALE A+ NA  N V++R +   SD FS V+G FD+IV +PP+     
Sbjct: 84  E--SVLAVDINPKALEAARDNARRNDVADRIEVRHSDVFSDVDGRFDLIVFDPPF----- 136

Query: 180 VDCLGLEVRDFDPR----ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                   R F PR     ++     G         G   HL  +G   +  G       
Sbjct: 137 --------RWFRPRTVFESAMTDENYG--AMTRFFLGARDHLTDNGRMLIFFG------- 179

Query: 236 VRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                S  L  + +  D  G DR ++  R
Sbjct: 180 ----TSGDLDYLTSLADETGFDRTVVARR 204


>gi|228912840|ref|ZP_04076487.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846776|gb|EEM91781.1| hypothetical protein bthur0012_890 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 213

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 113 KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|218530637|ref|YP_002421453.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
 gi|218522940|gb|ACK83525.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
          Length = 341

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 14/164 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D+    P+T    ++ LA    R         R  D+G G+GA  + + K  P  + 
Sbjct: 126 LAADSVFFGPDTMRFAEAVLAHLKERARAGHPAPRRAADIGCGSGAAGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA    V +    + SD  S+VEG FD+IVSNPP++    VD  G
Sbjct: 186 VLVDINPAALRAARINA-RLAVVDNVRPVHSDMLSNVEGSFDLIVSNPPFM----VDSGG 240

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG  G      + +  +  L   G   +  G
Sbjct: 241 RAYRH-------GGGPLGAGLSLRVVEAATERLAPGGSLVLFTG 277


>gi|42779182|ref|NP_976429.1| ybxB protein [Bacillus cereus ATCC 10987]
 gi|42735097|gb|AAS39037.1| ybxB protein [Bacillus cereus ATCC 10987]
 gi|324324091|gb|ADY19351.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 199

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNRIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDIVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|300119588|ref|ZP_07057132.1| ybxB protein [Bacillus cereus SJ1]
 gi|298723060|gb|EFI63958.1| ybxB protein [Bacillus cereus SJ1]
          Length = 199

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|254561604|ref|YP_003068699.1| hypothetical protein METDI3191 [Methylobacterium extorquens DM4]
 gi|254268882|emb|CAX24843.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 341

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D+    P+T    ++ L     R         R+ D+G G+GA  + + K  P  + 
Sbjct: 126 LAADSVFFGPDTMRFAEAVLVHLEERARAGHPAPRRVADIGCGSGAAGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA   GV +    + SD  SSVEG FD+IVSNPP++    VD  G
Sbjct: 186 VLVDINPAALRAARINARLAGV-DNVRPVHSDMLSSVEGSFDLIVSNPPFM----VDSGG 240

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG  G      + +  +  L   G   +  G
Sbjct: 241 RAYRH-------GGGPLGAGLSLRVVEAATERLAPGGSLVLFTG 277


>gi|238493946|ref|XP_002378209.1| methyltransferase, putative [Aspergillus flavus NRRL3357]
 gi|220694859|gb|EED51202.1| methyltransferase, putative [Aspergillus flavus NRRL3357]
          Length = 297

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 73/207 (35%), Gaps = 44/207 (21%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  L +      K   +  ILG + F  + +        PR ETE          L  ++
Sbjct: 63  RRLLRSMCHARSKGMPLQYILGDQPFGELDILCEKGVLIPRAETEAFTIQTAKLILNNVQ 122

Query: 95  KRDV---------VRILDLGTGTGAVCLALLKESP----FFKGVGVDISCKALEIAKSNA 141
           K            +RI+DL TG+G + L L             +GVD+S  A+ +A  N 
Sbjct: 123 KHGRHEAGQQQRSLRIVDLCTGSGCIGLLLHALLAPHIDQLSILGVDLSPAAIALANKNL 182

Query: 142 VTNGVS-------------ERFDTLQSD----------------WFSSVEGLFDVIVSNP 172
             N                +R + L  D                  S +E   DV++SNP
Sbjct: 183 AHNIQRGLLLNRAATEVSFQRGNVLPHDSSGLPSAREVLCNHQGLPSEIEPKCDVLISNP 242

Query: 173 PYIESVIV--DCLGLEVRDFDPRISLD 197
           PYI             VR F+P+++L 
Sbjct: 243 PYISPESFRDGTTSRSVRLFEPKLALV 269


>gi|49476714|ref|YP_034453.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|196036938|ref|ZP_03104319.1| ybxB protein [Bacillus cereus W]
 gi|196042331|ref|ZP_03109606.1| ybxB protein [Bacillus cereus NVH0597-99]
 gi|218901304|ref|YP_002449138.1| ybxB protein [Bacillus cereus AH820]
 gi|228925354|ref|ZP_04088450.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931603|ref|ZP_04094509.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943907|ref|ZP_04106292.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229119763|ref|ZP_04249024.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201]
 gi|301051838|ref|YP_003790049.1| hypothetical protein BACI_c01280 [Bacillus anthracis CI]
 gi|49328270|gb|AAT58916.1| conserved hypothetical protein, possible methyltransferase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|195990451|gb|EDX54438.1| ybxB protein [Bacillus cereus W]
 gi|196026837|gb|EDX65469.1| ybxB protein [Bacillus cereus NVH0597-99]
 gi|218536109|gb|ACK88507.1| ybxB protein [Bacillus cereus AH820]
 gi|228663664|gb|EEL19243.1| hypothetical protein bcere0016_880 [Bacillus cereus 95/8201]
 gi|228815740|gb|EEM61976.1| hypothetical protein bthur0007_880 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828031|gb|EEM73759.1| hypothetical protein bthur0009_960 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834276|gb|EEM79817.1| hypothetical protein bthur0010_880 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|300374007|gb|ADK02911.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 199

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|217957676|ref|YP_002336220.1| ybxB protein [Bacillus cereus AH187]
 gi|222093871|ref|YP_002527921.1| ybxb protein [Bacillus cereus Q1]
 gi|229136947|ref|ZP_04265574.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26]
 gi|229194491|ref|ZP_04321294.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293]
 gi|217063004|gb|ACJ77254.1| ybxB protein [Bacillus cereus AH187]
 gi|221237919|gb|ACM10629.1| ybxB protein [Bacillus cereus Q1]
 gi|228588957|gb|EEK46972.1| hypothetical protein bcere0001_870 [Bacillus cereus m1293]
 gi|228646485|gb|EEL02692.1| hypothetical protein bcere0013_910 [Bacillus cereus BDRD-ST26]
          Length = 199

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNRIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDIVHEILEKAIEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|332981031|ref|YP_004462472.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
           BON]
 gi|332698709|gb|AEE95650.1| 16S rRNA m(2)G 1207 methyltransferase [Mahella australiensis 50-1
           BON]
          Length = 201

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 33/185 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +     +  F  R +    +D+  +  L  +  R   R+LD+G G GA+ +++ K   
Sbjct: 26  CTLEFITDAGVFS-RGK----IDTGSSVLLNALPDRLSGRVLDMGCGYGAIGISIAKAYQ 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V VDI+ +A+E+A+ N   N +       QSD F+ VEGLFD+IVSNPP       
Sbjct: 81  DVEVVMVDINSRAVELAQGNIKLNSI-NNATVYQSDGFAQVEGLFDIIVSNPPIRA---- 135

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI 238
                                G      I +  + +L   G   V I   Q     + ++
Sbjct: 136 ---------------------GKRVVYAIFEQCAIYLKSGGEFYVVIQKKQGAESAMAKL 174

Query: 239 FESRK 243
            E   
Sbjct: 175 AEIYG 179


>gi|154276818|ref|XP_001539254.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414327|gb|EDN09692.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 508

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 80/230 (34%), Gaps = 62/230 (26%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE---------LLVDSA 85
           +  L   + R  +   +  ILG + F ++ +        PRPETE         LL + A
Sbjct: 85  QSRLREMVRRRARGVPLQYILGDQPFGDLEMLCRRGVLIPRPETESYTARVANLLLSELA 144

Query: 86  LAFSLP-------RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKAL 134
                        + E    +RI+DL TGTG + L L        P  +  GVDIS +AL
Sbjct: 145 PTRRKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISTRAL 204

Query: 135 EIAKSNAVTN--------GVSERFDTLQSDWFS--------------------------- 159
            +A+ N   N           +    ++ D  S                           
Sbjct: 205 RLARENLKHNIALGTLSERARDEVSFVKGDVLSGQSELSGLYTSSVTPASKTAAAAAAAA 264

Query: 160 -----SVEGLFDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLDGGIDG 202
                 +  +  +++SNPPYI             VR ++P+++L     G
Sbjct: 265 AAAEPEINPVITILLSNPPYISPAQFANGTTARSVRRYEPKLALVPPARG 314


>gi|309390256|gb|ADO78136.1| methyltransferase small [Halanaerobium praevalens DSM 2228]
          Length = 239

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 34/217 (15%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            E IH ++       + +      F+   ++ LL +          + R   +++DLGTG
Sbjct: 1   MEKIHYLIEN----ELEIIQDDRFFKFGTDSVLLANFV--------KLRRGDQVIDLGTG 48

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEG 163
           +G + L L  ++P  K  GV+I  +A  +A+ N   N +SE+ + +  D  +       G
Sbjct: 49  SGVIPLLLAYKNPEIKVTGVEIQAEAAALAQKNVEFNNLSEQIEIVNQDLCTLDSKYKTG 108

Query: 164 LFDVIVSNPPYIESVIVDCLGLEV---RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            FDV+VSNPPY+          +       + +          +    +    +R L   
Sbjct: 109 SFDVVVSNPPYLPVASGKLKENDYVAIARHELK----------ADLEAVVAEAARLLKYG 158

Query: 221 GLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKD 252
           G   +     +  +V+        ++++L LV A +D
Sbjct: 159 GHFFLVHRAERLTEVIETLARHNCQAKELRLVQARQD 195


>gi|21228642|ref|NP_634564.1| hypothetical protein MM_2540 [Methanosarcina mazei Go1]
 gi|20907142|gb|AAM32236.1| Conserved hypothetical protein [Methanosarcina mazei Go1]
          Length = 202

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 28/204 (13%)

Query: 57  WRDFYNVRLTLSSD--TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
             ++ N R+ L +    +EP  ++ LL D+AL       E    +RIL++G G+G V   
Sbjct: 3   EIEYRNTRVRLGASDLVYEPAEDSFLLADAALE------EAEPGMRILEIGAGSGFVSAV 56

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIV 169
           +       +    +I+  A   AK+N          + +++D F  ++       FD+I+
Sbjct: 57  IRANVKGIRIFATEINPHAALCAKANG--------VEVIRTDLFRGLKPGSKGTPFDLIL 108

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
            NPPY+ +   + +   +       + DGG  G        D V  +L   G   V I  
Sbjct: 109 FNPPYLPTSEEEKVTGWL-----NYAFDGGASGRETLDRFLDEVRNYLKPGGKVLVLISS 163

Query: 230 NQK-VDVVRIFESRKLF-LVNAFK 251
                 V            V   K
Sbjct: 164 ITGLEAVKDRMIKMGFEVDVVLRK 187


>gi|327478774|gb|AEA82084.1| HemK family modification methylase [Pseudomonas stutzeri DSM 4166]
          Length = 315

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 25/248 (10%)

Query: 11  LCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           L  V G S    H+++  P   L D Q   L     R      +  + G    ++   T 
Sbjct: 48  LHGVFGWSRPFQHELLPGPLFSLMD-QAQVLEACGSRWRSKVRLSSLDGQLFLHSAFPTT 106

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +SD     P+T    ++             + R +D+G G+GA  +      P  + + V
Sbjct: 107 ASDAVFFGPDTYRFANAIRCHLNQHT--GMIRRAVDIGCGSGAGAILTALARPQAEVLAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +AL +   NA   G ++    L SD  S+V+G FD+I++NPPY+    VD      
Sbjct: 165 DINPEALRLTHINAALAG-ADNLRALHSDLLSAVDGEFDLILANPPYL----VDADQRAY 219

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R         GG  G      I D   + L   G   +  G       V + +++  FL 
Sbjct: 220 RH-------GGGPLGAGLSLAILDAALQRLAPGGTLLLYTG-------VAMLDNQDPFLA 265

Query: 248 NAFKDYGG 255
              +   G
Sbjct: 266 EVRRRLQG 273


>gi|188581630|ref|YP_001925075.1| methyltransferase small [Methylobacterium populi BJ001]
 gi|179345128|gb|ACB80540.1| methyltransferase small [Methylobacterium populi BJ001]
          Length = 341

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 21/187 (11%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D+    P+T    ++ LA    R  K      R++D+G G+GA  + + K  P  + 
Sbjct: 126 LAADSVFFGPDTMRFAEAVLAHLEERARKGRPAPRRVVDIGCGSGATGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA   GV      + SD    VEG FD+IVSNPP++    VD  G
Sbjct: 186 VLVDINPAALRAARINARLAGVP-NVHPVHSDMLQGVEGAFDLIVSNPPFM----VDAGG 240

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-------YNQKVDVVR 237
              R+        GG  G      + +  +  L   G   +  G          K +   
Sbjct: 241 RAYRN-------GGGPLGAGLSLKVVEAAAERLAPGGSLVLFTGSAIVDGHDGFKAEAEA 293

Query: 238 IFESRKL 244
           I     L
Sbjct: 294 ICAGAGL 300


>gi|229552941|ref|ZP_04441666.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
 gi|229313685|gb|EEN79658.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
          Length = 206

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 37/195 (18%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +R T  +  F        + +L+ + LA +LP         ILD+G G G + LAL K
Sbjct: 33  HRLRFTTDNGVFSKHTVDFGSRVLIAAVLAETLPDGP------ILDVGAGYGPIGLALAK 86

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +AK NA  NG++     ++S  + S++  F V+V+NPP    
Sbjct: 87  HFPNRQVTMSDVNERALALAKQNAADNGIT-NVSIIESSMYDSIDDQFAVVVTNPPIRAG 145

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                            ++  G         I  G + HL   G     I   Q     +
Sbjct: 146 K----------------AIVSG---------ILSGAAAHLLPGGQLYAVIQKKQGAPSAL 180

Query: 237 RIFESRKLFLVNAFK 251
           ++ ++         K
Sbjct: 181 KLMKAT-YANAEVIK 194


>gi|118475870|ref|YP_893021.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415095|gb|ABK83514.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis str.
           Al Hakam]
          Length = 213

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 113 KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKLF 245
               G      I +    HL   G   + I   Q        +  +F       + +  +
Sbjct: 151 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVAEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|258509264|ref|YP_003172015.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG]
 gi|257149191|emb|CAR88164.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus GG]
 gi|259650546|dbj|BAI42708.1| 16S rRNA methylase [Lactobacillus rhamnosus GG]
          Length = 198

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 37/195 (18%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +R T  +  F        + +L+ + LA +LP         ILD+G G G + LAL K
Sbjct: 25  HRLRFTTDNGVFSKHTVDFGSRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +AK NA  NG++     ++S  + S++  F V+V+NPP    
Sbjct: 79  HFPNRQVTMSDVNERALALAKQNAADNGIT-NVSIIESSMYDSIDDQFAVVVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                            ++  G         I  G + HL   G     I   Q     +
Sbjct: 138 K----------------AIVSG---------ILSGAAAHLLPGGQLYAVIQKKQGAPSAL 172

Query: 237 RIFESRKLFLVNAFK 251
           ++ ++         K
Sbjct: 173 KLMKAT-YANAEVIK 186


>gi|225862153|ref|YP_002747531.1| ybxB protein [Bacillus cereus 03BB102]
 gi|229182495|ref|ZP_04309746.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1]
 gi|225786254|gb|ACO26471.1| ybxB protein [Bacillus cereus 03BB102]
 gi|228600950|gb|EEK58519.1| hypothetical protein bcere0004_880 [Bacillus cereus BGSC 6E1]
          Length = 199

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKIHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKLF 245
               G      I +    HL   G   + I   Q        +  +F       + +  +
Sbjct: 137 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVAEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|229170952|ref|ZP_04298553.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3]
 gi|228612492|gb|EEK69713.1| hypothetical protein bcere0006_880 [Bacillus cereus MM3]
          Length = 213

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 113 KENAANNRIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDIVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|312137231|ref|YP_004004568.1| methylase [Methanothermus fervidus DSM 2088]
 gi|311224950|gb|ADP77806.1| methylase [Methanothermus fervidus DSM 2088]
          Length = 195

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 69/200 (34%), Gaps = 34/200 (17%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLV--------DSALAFSLPRIEKRDVVRILDLGTGTGA 110
            + N++       +EP  +T LL+        D  L                        
Sbjct: 3   KYKNLKFKTCPKVYEPSDDTFLLLKNLKICKDDKVLEIGTGIGIIAIF------------ 50

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
               + +E      V  DI+  A++ AK NA  N V      L+ + F  +   F+ I+ 
Sbjct: 51  -ASQIARE-----VVATDINPYAIQCAKKNAQINSVK-NIKFLEGNLFEPINEKFNTILF 103

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGY 229
           NPPY+ +     L  E+      ++ DGG +G          V ++L  DG    V+   
Sbjct: 104 NPPYLPTEDFKELKDELC-----LAWDGGSNGRKIIDRFLKEVDKYLKPDGKIQLVQSSL 158

Query: 230 NQKVDVVRIFESRKLFLVNA 249
           +     + I E +    V  
Sbjct: 159 SNPNKTIDILERKGF-EVEI 177


>gi|86261634|emb|CAI47647.1| putative N-methyltransferase [Streptoalloteichus hindustanus]
          Length = 262

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 15/209 (7%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              +   +    +  +LG   +              R  +E LV   +          + 
Sbjct: 38  AAMLTDYVAGVPLGYVLGEIHYLGRAFRSDRRALAVRRYSEPLVRRIVDDF-----AGEP 92

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR +++G G  A    L KE    + VG D+  +ALE+A+ NA  +    RF    SD F
Sbjct: 93  VRAVEIGCGAAAAICTLAKELTG-EFVGTDVVPEALELAEENATRHRAPVRFVV--SDLF 149

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSRHL 217
            +++G FDVI +N   +          E R ++P ++L     +     R     V   L
Sbjct: 150 DALDGRFDVIYAN---LPRHHPSTPMPEAR-WEPSVALYDDSAEPFGLLRRFFAEVPDRL 205

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + G   +EI  +    +  +     +  
Sbjct: 206 TERGRLYLEIPLD--PAIADLLPGEPVVD 232


>gi|146280537|ref|YP_001170690.1| HemK family modification methylase [Pseudomonas stutzeri A1501]
 gi|145568742|gb|ABP77848.1| modification methylase, HemK family [Pseudomonas stutzeri A1501]
          Length = 315

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 25/248 (10%)

Query: 11  LCRVTGLSS---HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTL 67
           L  V G S    H+++  P   L D Q   L     R      +  + G    ++   T 
Sbjct: 48  LHGVFGWSRPFQHELLPGPLFSLMD-QAQVLEACGSRWRSKVRLSSLDGQLFLHSAFPTN 106

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +SD     P+T    ++             + R +D+G G+GA  +      P  + + V
Sbjct: 107 ASDAVFFGPDTYRFANAIRCHLNQHT--GMIRRAVDIGCGSGAGAILTALARPQAEVLAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +AL +   NA   G ++    L SD  S+V+G FD+I++NPPY+    VD      
Sbjct: 165 DINPEALRLTHINAALAG-ADNLRALHSDLLSAVDGEFDLILANPPYL----VDADQRAY 219

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R         GG  G      I D   + L   G   +  G       V + +++  FL 
Sbjct: 220 RH-------GGGPLGAGLSLAILDAALQRLAPGGTLLLYTG-------VAMLDNQDPFLA 265

Query: 248 NAFKDYGG 255
              +   G
Sbjct: 266 EVRRRLQG 273


>gi|229027949|ref|ZP_04184102.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271]
 gi|228733337|gb|EEL84166.1| hypothetical protein bcere0028_880 [Bacillus cereus AH1271]
          Length = 213

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 38/163 (23%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L+L KE    K   VD++ +ALE+AK NA  N +       QS  + +
Sbjct: 76  ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELAKENAANNRIG-NVHIFQSSVYEN 134

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G++  I+SNPP                            G      I +    +L   
Sbjct: 135 VDGMYAAILSNPPIRA-------------------------GKDIVHEILEKAVEYLVPG 169

Query: 221 GLCSVEIGYNQKV--DVVRI----------FESRKLFLVNAFK 251
           G   + I   Q     + ++           + +  +++ + K
Sbjct: 170 GELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|118469810|ref|YP_886143.1| methylase [Mycobacterium smegmatis str. MC2 155]
 gi|118171097|gb|ABK71993.1| methylase, putative [Mycobacterium smegmatis str. MC2 155]
          Length = 222

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 9/159 (5%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +   + P+ +++LL+D     +L R  +    R+LDL TG+G V +A            +
Sbjct: 6   TEGVYRPQEDSQLLID-----ALERSGEVPGRRVLDLCTGSGVVAIAAAHLGAE-HVTAL 59

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DI  +A+E A +       +   D     W  ++    FD++V NPPY+ +      G  
Sbjct: 60  DICPRAVEYATA--NAASAAADVDVRLGTWNEALNWEPFDLVVCNPPYVPTSPAVDPGSV 117

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                P  + DGG DG      + D     L + G   +
Sbjct: 118 APWAGPATAWDGGADGRMILDPLCDVAGAMLAEGGSLFL 156


>gi|239927102|ref|ZP_04684055.1| methyltransferase [Streptomyces ghanaensis ATCC 14672]
          Length = 209

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +TELL     A +L          +LD+GTG+G   LAL       +   VD+S 
Sbjct: 2   YAPQEDTELL-----AGALSDEPVPPGADVLDMGTGSG--ALALEAARRGTRVTAVDVSW 54

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A+   + NA+  GV  R    + + F  V G  FD+I++NPPY+ +             
Sbjct: 55  RAVCTTRLNALVAGVPVRVR--RGNLFDPVRGRSFDLILANPPYVPAPADGRPPRGAAR- 111

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               + D G DG      I       L   G+  +
Sbjct: 112 ----AWDAGGDGRLVLDRICREAPAMLRPGGVLLL 142


>gi|229089232|ref|ZP_04220513.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42]
 gi|228694071|gb|EEL47753.1| hypothetical protein bcere0021_870 [Bacillus cereus Rock3-42]
          Length = 164

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 11  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 63

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 64  KENAANNKIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 101

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    HL   G   + I   Q     + ++           + +  +
Sbjct: 102 ----GKDVVHEILEKAVEHLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 157

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 158 IIKSKK 163


>gi|298385622|ref|ZP_06995180.1| SmtA protein [Bacteroides sp. 1_1_14]
 gi|298261763|gb|EFI04629.1| SmtA protein [Bacteroides sp. 1_1_14]
          Length = 237

 Score =  103 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 13/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +   RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R 
Sbjct: 32  WASVQGAHRILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAVQAKENVARSPWKDRI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + ++ D+ S      FDVIVSNPPY ++S+        +             D L+ Y  
Sbjct: 92  EVVKQDFLSYQSPDKFDVIVSNPPYFVDSLSCPDQQRSMARH---------NDSLT-YEK 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  GV+  L K+G  ++ I  +    V        L+   
Sbjct: 142 LLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYYLYATR 181


>gi|199599024|ref|ZP_03212431.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001]
 gi|199590060|gb|EDY98159.1| 16S RNA G1207 methylase RsmC [Lactobacillus rhamnosus HN001]
          Length = 198

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 37/195 (18%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +R T  +  F        + +L+ + LA +LP         ILD+G G G + LAL K
Sbjct: 25  HRLRFTTDNGVFSKHTVDFGSRVLIATVLAETLPDGP------ILDVGAGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +AK NA  NG++     ++S  +  ++  F V+V+NPP    
Sbjct: 79  HFPNRQVTMSDVNERALALAKQNAADNGIT-NVSIIESSMYDGIDDQFAVVVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                            ++  G         I  G + HL   G     I   Q     +
Sbjct: 138 K----------------AIVSG---------ILSGAAAHLLPGGQLYAVIQKKQGAPSAL 172

Query: 237 RIFESRKLFLVNAFK 251
           ++ ++         K
Sbjct: 173 KLMKAT-YANAEVIK 186


>gi|47570394|ref|ZP_00241034.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241]
 gi|47552936|gb|EAL11347.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus G9241]
          Length = 199

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    K   VD++ +ALE+A
Sbjct: 46  SRLLIE---AFQVPDIKGD----ILDVGCGYGPIGLSLAKEFQDRKVHMVDVNERALELA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + NA  N +       QS  + +V+G++  I+SNPP                        
Sbjct: 99  EENAANNRIG-NVHIFQSSVYENVDGMYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDIVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|119873045|ref|YP_931052.1| methyltransferase small [Pyrobaculum islandicum DSM 4184]
 gi|119674453|gb|ABL88709.1| methyltransferase small [Pyrobaculum islandicum DSM 4184]
          Length = 225

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 68/191 (35%), Gaps = 21/191 (10%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           R  +  A +R L   S   +     F ++ L +    F P          A++ +L    
Sbjct: 3   RAEIARAALRILHAASPAAVY---RFRDMALYIPRGVFNPV--------FAVSTALAISH 51

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                R+ DLGTG+GA+ +AL K          DIS  AL  A+ NA  N V+ +     
Sbjct: 52  IDARGRVADLGTGSGAIAIALAKSPQVETVCAYDISPLALATARVNAEINRVAHKVAICP 111

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         +DV+ +NPPY+     D                 G   L   R I    +
Sbjct: 112 TRKALLAAAPYDVVTANPPYLPLDPRDEKDKN---------WCAGRH-LEAIREITAQAT 161

Query: 215 RHLNKDGLCSV 225
             L   G   +
Sbjct: 162 HILKPGGTLYI 172


>gi|240139009|ref|YP_002963484.1| hypothetical protein MexAM1_META1p2426 [Methylobacterium extorquens
           AM1]
 gi|240008981|gb|ACS40207.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 341

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 21/188 (11%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKG 124
           L++D     P+T    ++ LA    R         R  D+G G+GA  + + K  P  + 
Sbjct: 126 LAADAVFFGPDTMRFAEAVLAHLEERTRAGHPAPRRAADIGCGSGAAGILVAKRLPEAEV 185

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           V VDI+  AL  A+ NA   GV      + SD  S+VEG FD+IVSNPP++    VD  G
Sbjct: 186 VLVDINPAALRAARINARLAGVG-NVRPVHSDMLSNVEGSFDLIVSNPPFM----VDSGG 240

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-------EIGYNQKVDVVR 237
              R         GG  G      + +  +  L   G   +       E     + +   
Sbjct: 241 RAYRH-------GGGPLGAGLSLRVVEAATERLAPGGSLVLFTGSAIVEGHDGFREEASA 293

Query: 238 IFESRKLF 245
           I     L 
Sbjct: 294 ICARAGLK 301


>gi|220915946|ref|YP_002491250.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953800|gb|ACL64184.1| methyltransferase small [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 386

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 24/192 (12%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD   A +  R    D  R  D+GTGTG + L L +     + +
Sbjct: 175 RVHPFHGVYAPIRGEYVDLVGAAAKER--PLDGKRAFDVGTGTGVLALVLARA--GARVI 230

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +A+  A+ NA   G++ + + +++D F   EGL DVIV NPP+I       L  
Sbjct: 231 ATDLEPRAVACARENAARLGLAGQVEVVEADLFP--EGLADVIVCNPPWIPGPARGPLER 288

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-------IGYNQKVDVVRI 238
            V  +DP         G +    +  G+  HL   G   +        +G     +V R+
Sbjct: 289 AV--YDP---------GGAFLERLVRGLPAHLAPGGEAWIVLSDLAERLGLRPPGEVERL 337

Query: 239 FESRKLFLVNAF 250
             +  L  V+  
Sbjct: 338 ARAAGLEGVDVR 349


>gi|284046461|ref|YP_003396801.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283950682|gb|ADB53426.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 376

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 18/151 (11%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            +  + R+LDL TG+G     LL   P   + V V++      +A+ N + NG+ ER D 
Sbjct: 158 NRGPLGRVLDLCTGSG-----LLATLPDAAQVVAVELDPVTASVARFNVLLNGLGERIDV 212

Query: 153 LQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              D +  V G   FD+IV+NPP + S     +          ++ DGG DG +  R + 
Sbjct: 213 RDGDLYEPVAGEQPFDLIVANPPIVPSPEGISVP---------LAGDGGPDGDAALRRVL 263

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            GV RHL   G   V  G     +       
Sbjct: 264 AGVERHLAPGGRALV-HGQGFGGEAEPALAD 293


>gi|270291186|ref|ZP_06197409.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
 gi|270280582|gb|EFA26417.1| 16S RNA methylase RsmC [Pediococcus acidilactici 7_4]
          Length = 201

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 72/203 (35%), Gaps = 33/203 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIE-KRDVVRILDLGTGTGA 110
           G  D  + R TL         +  +     VD      L  +        ILD+G G G 
Sbjct: 12  GEHDEKHWRYTLLGHELNFVSDNGVFSKNTVDFGTRTLLEALPLDVPQSSILDVGCGYGP 71

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIV 169
           + +AL K+ P  +    D++ +AL +A+ NA  NGV+ R     SD + +V    F  +V
Sbjct: 72  MGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSDAYEAVAKTDFTTVV 131

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP             VR             G +    I  G   HL K G   + +  
Sbjct: 132 SNPP-------------VRA------------GKTVVNAIITGAKEHLTKGGQLIIVLQK 166

Query: 230 NQK-VDVVRIFESRKLFLVNAFK 251
            Q      ++        V   K
Sbjct: 167 KQGAPSAKKLMAET-FGNVTVLK 188


>gi|253568320|ref|ZP_04845731.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842393|gb|EES70473.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 237

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 13/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +   RILD+GTGTG V L L + S P    V ++I   A   AK N   +   +R 
Sbjct: 32  WASVQGAYRILDIGTGTGLVALMLAQRSLPDANIVALEIDEAAAGQAKENVARSPWKDRI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + ++ D+ S      FDVIVSNPPY ++S+        +             D L+ Y  
Sbjct: 92  EVVKQDFLSYQSPDKFDVIVSNPPYFVDSLSCPDQQRSMARH---------NDSLT-YEK 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  GV+  L K+G  ++ I  +    V        L+   
Sbjct: 142 LLKGVADLLKKEGTFTIVIPTDVADRVKTAASEYYLYATR 181


>gi|304385471|ref|ZP_07367816.1| methyltransferase domain protein [Pediococcus acidilactici DSM
           20284]
 gi|304328678|gb|EFL95899.1| methyltransferase domain protein [Pediococcus acidilactici DSM
           20284]
          Length = 201

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 60/157 (38%), Gaps = 28/157 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+G G G + +AL K+ P  +    D++ +AL +A+ NA  NGV+ R     SD
Sbjct: 58  PQSSILDVGCGYGPMGIALAKQFPEARVEMTDVNERALALAERNAEANGVAARTRVYHSD 117

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            + +V    F  +VSNPP             VR             G +    I  G   
Sbjct: 118 AYEAVAKTDFTTVVSNPP-------------VRA------------GKTVVNAIITGAKE 152

Query: 216 HLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
           HL K G   + +   Q      ++        V   K
Sbjct: 153 HLTKGGQLIIVLQKKQGAPSAKKLMAET-FGNVTVLK 188


>gi|116495718|ref|YP_807452.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei ATCC 334]
 gi|116105868|gb|ABJ71010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus casei ATCC
           334]
          Length = 198

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 43/196 (21%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++R T  +  F        + +L+ + LA  LP         ILD+GTG G + LAL K
Sbjct: 25  HSLRFTSDNGVFSKHTVDFGSRVLIATILAEELPTGP------ILDVGTGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +A+ NA  N +S     ++S  +  ++G F VIV+NPP    
Sbjct: 79  HFPDRQVTMSDVNERALALAQRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
             +                  G         I  G + HL   G     I   Q     +
Sbjct: 138 KTI----------------VSG---------ILAGAAEHLLPHGQLYAVIQKKQGAPSAL 172

Query: 237 RIFESRKLFLVNAFKD 252
           ++ +         ++D
Sbjct: 173 KLMK-------TIYQD 181


>gi|56418632|ref|YP_145950.1| hypothetical protein GK0097 [Geobacillus kaustophilus HTA426]
 gi|56378474|dbj|BAD74382.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 261

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 52/215 (24%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +L   +F   R T  S  F  R     T LL+++         E      +LD+G G G
Sbjct: 82  YVLRGHEF---RFTTDSGVFSKREVDFGTRLLIETF-------EEPGVAGDLLDVGCGYG 131

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVI 168
            + LAL K  P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +
Sbjct: 132 PIGLALAKSFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAV 190

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPP                            G      I +    HL   G   V I 
Sbjct: 191 VTNPPIRA-------------------------GKRVVYAIFEQSRDHLLDHGELWVVIQ 225

Query: 229 YNQK------------VDVVRIFESRKLFLVNAFK 251
             Q               V  + + +  +++   K
Sbjct: 226 KKQGAPSALQKLNECFPAVEVVAKKKGYYIIKVKK 260


>gi|298484042|ref|ZP_07002211.1| SAM-dependent methyltransferase [Bacteroides sp. D22]
 gi|298269823|gb|EFI11415.1| SAM-dependent methyltransferase [Bacteroides sp. D22]
          Length = 236

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 17/178 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER 
Sbjct: 32  WASVERARRILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+                      D L+ Y  
Sbjct: 92  EVVQADFKKYRSSDKFDVIVSNPPYFVDSLECPDRQRAAARH---------NDSLT-YEE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLLF 262
           + +G +R L  DGL +V I  +    V  I    KL+ +         GG   R L+ 
Sbjct: 142 LLEGGNRLLAADGLFTVVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGGIPKRTLIA 199


>gi|148827172|ref|YP_001291925.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|226712956|sp|A5UFI6|RSMC_HAEIG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|148718414|gb|ABQ99541.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittGG]
          Length = 330

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+ +
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            + +      HLN+ G  
Sbjct: 268 GIDTAYRT---------------------VKELITQAKWHLNQGGEL 293


>gi|295084254|emb|CBK65777.1| Predicted O-methyltransferase [Bacteroides xylanisolvens XB1A]
          Length = 236

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 17/178 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+GTGTG V L L + S P  K V ++I   A   A+ N   +   ER 
Sbjct: 32  WASVERARRILDIGTGTGLVALMLAQRSLPDAKIVALEIDEAAAGQARENVARSPWQERI 91

Query: 151 DTLQSDWFSS-VEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+            +  ++          Y  
Sbjct: 92  EVVQADFKKHRSSDKFDVIVSNPPYFVDSLECPDRQRTAARHNNSLT----------YEE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLLF 262
           + +GV+R L  DGL +  I  +    V  I    KL+ +         GG   R L+ 
Sbjct: 142 LLEGVNRLLAADGLFTAVIPTDVVDRVKAIASMNKLYAIRQLNVITKPGGIPKRTLIA 199


>gi|229107787|ref|ZP_04237423.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
 gi|228675636|gb|EEL30844.1| hypothetical protein bcere0018_880 [Bacillus cereus Rock1-15]
          Length = 199

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 78/210 (37%), Gaps = 50/210 (23%)

Query: 59  DFYNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           D    R T  SD            + LL++   AF +P I+      ILD+G G G + L
Sbjct: 22  DLRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYGPIGL 74

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+SNPP
Sbjct: 75  SLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPP 133

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +    +L   G   + I   Q  
Sbjct: 134 IRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQKKQGA 168

Query: 234 --DVVRI----------FESRKLFLVNAFK 251
              + ++           + +  +++ + K
Sbjct: 169 PSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|225554311|gb|EEH02611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 500

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/222 (21%), Positives = 77/222 (34%), Gaps = 59/222 (26%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI- 93
           +  L   + R  +   +  ILG + F  + +        PRPETE          L ++ 
Sbjct: 85  QSRLREMVRRRARGVPLQYILGDQPFGELEMLCRRGVLIPRPETESYTTRVANLLLSKLA 144

Query: 94  ---------------EKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKAL 134
                          E    +RI+DL TGTG + L L        P  +  GVDIS +AL
Sbjct: 145 PTRRKGLAHRDECKCEHLPTLRIVDLCTGTGCIPLLLHSLLSPVFPKLQICGVDISARAL 204

Query: 135 EIAKSNAVTN--------GVSERFDTLQSDWFS--------------------------- 159
           ++A+ N   N           E    ++ +  S                           
Sbjct: 205 KLARENLKHNIALGMLSERAREEVSFVKGNVLSGQSELSELYTSSVTPSSKTAAAAAAAA 264

Query: 160 --SVEGLFDVIVSNPPYIESVIVD--CLGLEVRDFDPRISLD 197
              +  +  +++SNPPYI             VR ++P+++L 
Sbjct: 265 EPEINPVITILLSNPPYISPAQFANGTTARSVRRYEPKLALV 306


>gi|255691883|ref|ZP_05415558.1| SmtA protein [Bacteroides finegoldii DSM 17565]
 gi|260622436|gb|EEX45307.1| SmtA protein [Bacteroides finegoldii DSM 17565]
          Length = 236

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 17/178 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +   R+LD+GTGTG V L L + SP   K V +++   A+E AK N   +   E+ 
Sbjct: 32  WTSVQGARRVLDVGTGTGLVALMLAQRSPADVKIVALEVDTAAVEQAKENVARSFWKEQI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+      G FDVIVSNPPY    +    +           SL         Y  
Sbjct: 92  EVVQADFNQYHSSGKFDVIVSNPPYFVGSLKCPDVQRNAARH--ATSLT--------YEE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLLF 262
           +  GV+  L +DG  +V I  +    V  I     L+           GG   RVL+ 
Sbjct: 142 LLKGVAGLLAEDGTFTVVIPADVADRVKGIASMWNLYAARQLNVITKPGGVPKRVLIA 199


>gi|239630123|ref|ZP_04673154.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067273|ref|YP_003789296.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
 gi|239527735|gb|EEQ66736.1| 16S RNA methylase RsmC [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439680|gb|ADK19446.1| 16S RNA G1207 methylase RsmC [Lactobacillus casei str. Zhang]
          Length = 198

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 35/176 (19%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++R T  +  F        + +L+ + LA  LP         ILD+GTG G + LAL K
Sbjct: 25  HSLRFTSDNGVFSKHTVDFGSRVLIATILAEELPTGP------ILDVGTGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +A+ NA  N +S     ++S  +  ++G F VIV+NPP    
Sbjct: 79  HFPDRQVTMSDVNERALALAQRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
             +                  G         I  G + HL   G     I   Q  
Sbjct: 138 KTI----------------VSG---------ILAGAAEHLLPHGQLYAVIQKKQGA 168


>gi|228956542|ref|ZP_04118338.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228803107|gb|EEM49929.1| hypothetical protein bthur0005_880 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 213

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|228919051|ref|ZP_04082430.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229041006|ref|ZP_04189769.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
 gi|228727303|gb|EEL78497.1| hypothetical protein bcere0027_870 [Bacillus cereus AH676]
 gi|228840576|gb|EEM85838.1| hypothetical protein bthur0011_870 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 213

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFVLRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|330990855|ref|ZP_08314810.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1]
 gi|329762001|gb|EGG78490.1| Putative adenine-specific methylase [Gluconacetobacter sp. SXCC-1]
          Length = 323

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 54/207 (26%), Positives = 80/207 (38%), Gaps = 28/207 (13%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G   F++   T+++D     P++     + LA  L        VR +D+G GTG   + +
Sbjct: 106 GNGFFHSAFPTVAADAVFFGPDSYRF-GAVLAAHLR--SAPPPVRAVDIGCGTGLGAIMI 162

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +  P  + V VDI+  AL +A+ N    GV       Q D  S + G FD+I+SNPPY+
Sbjct: 163 AQVCPSTEVVMVDINPDALRLARINVGLAGVGG-IMAWQGDLLSGLSGAFDLIISNPPYL 221

Query: 176 ESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLNKDGLCSVEIG---- 228
                            R+  DGG     GLS    I       L   G   +  G    
Sbjct: 222 PDPGC------------RLYRDGGGRLGAGLSL--AIVRTAMERLTPGGTLLLYTGTAII 267

Query: 229 ---YNQKVDVVRIFESRKLFLVNAFKD 252
                   DVV + + R+        D
Sbjct: 268 NGDNPFLRDVVALLDGREFTWAATELD 294


>gi|229142907|ref|ZP_04271348.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
 gi|296500935|ref|YP_003662635.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           BMB171]
 gi|228640528|gb|EEK96917.1| hypothetical protein bcere0012_880 [Bacillus cereus BDRD-ST24]
 gi|296321987|gb|ADH04915.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           BMB171]
          Length = 199

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 71  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|212637945|ref|YP_002314465.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1]
 gi|212559425|gb|ACJ32480.1| 16S RNA G1207 methylase RsmC [Anoxybacillus flavithermus WK1]
          Length = 202

 Score =  102 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 76/202 (37%), Gaps = 48/202 (23%)

Query: 65  LTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            T+    F  +     + LL+++        +E      ILD+G G G + LAL K+ P 
Sbjct: 33  FTVDQGVFSKKEVDFGSRLLIETF-------VEPNVSGSILDVGCGYGPIGLALAKDFPH 85

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                +D++ +A+E+AK N   N + E      SD F  VEG F  IV+NPP        
Sbjct: 86  RMVHMIDVNERAIELAKKNKQQNDI-ENVRIYISDLFQRVEGKFAAIVTNPPIRA----- 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G +   +I +  + +L   G   V I   Q        + 
Sbjct: 140 --------------------GKAVVHSIFEQSANYLLSGGQLWVVIQKKQGAPSALEKLK 179

Query: 237 RIF-------ESRKLFLVNAFK 251
            IF       + +  F++ A K
Sbjct: 180 TIFDEVDVVEKKKGYFIIRAQK 201


>gi|229074162|ref|ZP_04207208.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18]
 gi|228708932|gb|EEL61059.1| hypothetical protein bcere0024_880 [Bacillus cereus Rock4-18]
          Length = 199

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 75/205 (36%), Gaps = 43/205 (20%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKE 118
             TL    F    +  +     VD      +   E  DV   +LD+G G G + L+L KE
Sbjct: 20  EFTLRESRFTFLSDHGVFSKNEVDFGSRLLIEAFEMPDVKGNVLDVGCGYGPIGLSLAKE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +AL +AK NA  N + E    LQS  + +V+G + VI+SNPP     
Sbjct: 80  FQDREIHMVDVNERALGLAKENAANNKI-ENVRILQSSVYENVDGKYAVILSNPPIRA-- 136

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I +    +L   G   + I   Q     + 
Sbjct: 137 -----------------------GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSALK 173

Query: 237 RI----------FESRKLFLVNAFK 251
           ++           + +  +++ + K
Sbjct: 174 KLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|229083421|ref|ZP_04215769.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44]
 gi|228699854|gb|EEL52491.1| hypothetical protein bcere0022_1010 [Bacillus cereus Rock3-44]
          Length = 213

 Score =  102 bits (255), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 37/175 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      +LD+G G G + L+L KE        VD++ +ALE+A
Sbjct: 60  SRLLIE---AFQMPDIKGD----VLDVGCGYGPIGLSLAKEFQERSVHMVDVNERALELA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + +     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNKI-DNVRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLVNAF 250
               G      I +    HL  DG   + I   Q     + ++        V   
Sbjct: 151 ----GKHIVHEILEKAVDHLVPDGELWIVIQKKQGAPSALKKL--EESFSEVEVV 199


>gi|229188386|ref|ZP_04315434.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
 gi|228595060|gb|EEK52831.1| hypothetical protein bcere0002_880 [Bacillus cereus ATCC 10876]
          Length = 213

 Score =  102 bits (255), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGD----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|229125618|ref|ZP_04254650.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
 gi|228657810|gb|EEL13616.1| hypothetical protein bcere0015_880 [Bacillus cereus BDRD-Cer4]
          Length = 213

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N +       QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKIK-NIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|262375965|ref|ZP_06069196.1| predicted protein [Acinetobacter lwoffii SH145]
 gi|262309059|gb|EEY90191.1| predicted protein [Acinetobacter lwoffii SH145]
          Length = 317

 Score =  102 bits (254), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 93/256 (36%), Gaps = 30/256 (11%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
                  +     ++L + Q   +     + L    +  + G    ++   T   D    
Sbjct: 56  LNFKKTDLDSALFTLLQEHQLLQVQE--DQYLSQVRVSSLDGELFIHSAFPTTQQDAVFF 113

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKA 133
            P+T   +     +     + R   R++++  GT A  +++ +  P   + +  D++ KA
Sbjct: 114 GPDTYRFIYHLKQYL--AAQPRPFKRVVEMCCGTSAAAISIARHFPAVNEMMVADLNPKA 171

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L  ++ N    G++     +QS+ FS+++G FD+I +NPPY+       +  E R +   
Sbjct: 172 LLYSQINISFAGLNH-IHPVQSNLFSNLDGKFDLIFANPPYL-------IDPEQRQY--- 220

Query: 194 ISLDGGI--DGLSHYRTIADGVSRHLNKDGLCSV-------EIGYNQKVDVVRIFESRK- 243
               GG   DG      I     + LN  G   +       E G      +  + +  + 
Sbjct: 221 --RHGGNALDGCDLSFRIIKEGLQRLNSGGHLFLYTGVTVTEHGNLFLQHLKDLMKQHQN 278

Query: 244 --LFLVNAFKDYGGND 257
                     D  G +
Sbjct: 279 IIWSYEEIDPDIFGEE 294


>gi|30018371|ref|NP_830002.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
 gi|29893911|gb|AAP07203.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus cereus ATCC 14579]
          Length = 199

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 78/214 (36%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N +       QS  + +V+G +  I+
Sbjct: 71  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKIK-NIRIFQSSVYENVDGKYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L   G   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPGGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|261409530|ref|YP_003245771.1| methyltransferase small [Paenibacillus sp. Y412MC10]
 gi|261285993|gb|ACX67964.1| methyltransferase small [Paenibacillus sp. Y412MC10]
          Length = 201

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 72/196 (36%), Gaps = 31/196 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +      +L SD           VD      +  ++     ++LD+G G G + L   + 
Sbjct: 23  ELRGQSFSLVSDAGVFSKGG---VDYGSKVLIDAMDFGQDAQVLDVGCGYGPIGLTAARM 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
           +       +DI+ +A+E+AK NA  NG+      L+SD F +V +  FDV+++NPP    
Sbjct: 80  ASQGHVTMIDINSRAVELAKENAKRNGI-INVTILESDLFEAVKDQQFDVVLTNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                                   G      I +   +HL ++G   V I   Q      
Sbjct: 138 ------------------------GKETVHAIFEESWKHLRENGQLWVVIQKKQGAPSAK 173

Query: 237 RIFESRKLFLVNAFKD 252
              ES    +    KD
Sbjct: 174 AKLESLFYQVEEVTKD 189


>gi|224586377|ref|YP_002640176.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|224470905|gb|ACN48735.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
          Length = 342

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|261417598|ref|YP_003251280.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|261374055|gb|ACX76798.1| methyltransferase small [Geobacillus sp. Y412MC61]
          Length = 202

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 77/215 (35%), Gaps = 52/215 (24%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +L   +F   R T  S  F  R     T LL+++         E      +LD+G G G
Sbjct: 23  YVLRGHEF---RFTTDSGVFSKREVDFGTRLLIETF-------EEPGVAGDLLDVGCGYG 72

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVI 168
            + LAL K  P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +
Sbjct: 73  PIGLALAKSFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAV 131

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPP                            G      I +    HL   G   V I 
Sbjct: 132 VTNPPIRA-------------------------GKRVVYAIFEQSRDHLLDHGELWVVIQ 166

Query: 229 YNQK------------VDVVRIFESRKLFLVNAFK 251
             Q               V  + + +  +++ A K
Sbjct: 167 KKQGAPSALQKLNECFPAVEVVAKKKGYYIIKAKK 201


>gi|329962821|ref|ZP_08300706.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
 gi|328529378|gb|EGF56291.1| methyltransferase domain protein [Bacteroides fluxus YIT 12057]
          Length = 235

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 10/155 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +V R+LD+GTGTG + L L + +P  K   ++I   A E AK+N + +  ++R +
Sbjct: 32  WAPIANVKRVLDVGTGTGLIALQLAQRNPHAKITAIEIDTVAAEQAKNNVLHSPWADRIE 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L  D+ +   +  FD+IVSNPPY    +      E R     ++   G  GL+ Y ++ 
Sbjct: 92  VLCLDFRNYQQDDKFDLIVSNPPYFMDALK--CPDEQRC----MARHAG--GLN-YHSLF 142

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                 L++ G  S+ I    +   V    S KLF
Sbjct: 143 RHAVHLLSEQGKVSIIIPSEVEKTAVDAAWSHKLF 177


>gi|191639206|ref|YP_001988372.1| 16S RNA methylase [Lactobacillus casei BL23]
 gi|190713508|emb|CAQ67514.1| 16S RNA methylase [Lactobacillus casei BL23]
 gi|327383284|gb|AEA54760.1| Hypothetical conserved protein [Lactobacillus casei LC2W]
 gi|327386467|gb|AEA57941.1| Hypothetical conserved protein [Lactobacillus casei BD-II]
          Length = 198

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 35/176 (19%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++R T  +  F        + +L+ + LA  LP         ILD+GTG G + LAL K
Sbjct: 25  HSLRFTSDNGVFSKHTVDFGSRVLIATILAEELPAGP------ILDVGTGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +A+ NA  N +S     ++S  +  ++G F VIV+NPP    
Sbjct: 79  HFPDRQVTMSDVNERALALAQRNATDNAIS-NVTIVESSMYDQIDGQFGVIVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
             +                  G         I  G + HL   G     I   Q  
Sbjct: 138 KTI----------------VSG---------ILAGAAEHLLPHGELYAVIQKKQGA 168


>gi|242824194|ref|XP_002488209.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218713130|gb|EED12555.1| n6-DNA-methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 361

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 73/209 (34%), Gaps = 37/209 (17%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
            D       +  L        K + +  ILG + F ++ +        PR ETE      
Sbjct: 57  QDVYSTHTWQRELRKMCDDRSKGKPLQYILGDQPFGDLDILCRKGVLIPRGETESFTFHT 116

Query: 86  LAFSLPRIEKR---DVVRILDLGTGTGAV----CLALLKESPFFKGVGVDISCKALEIAK 138
               L     +     +RILDL +G+G +       L         VGVD+  +A+ +++
Sbjct: 117 RDVILEAHSAKYLGKSLRILDLCSGSGCISLLLHSLLASHFKDLTIVGVDVDPRAISLSQ 176

Query: 139 SNAVTN--------GVSERFDTLQSDWFSSVE--------------------GLFDVIVS 170
            N + N                L++D   S+E                      +DV++S
Sbjct: 177 KNKLHNIRRGLLSPRAQNEVCFLKADILDSIESGKRSFLDTLQPHFPGSNTQSTWDVLIS 236

Query: 171 NPPYIESVIV--DCLGLEVRDFDPRISLD 197
           NPPYI +           VR ++P  +L 
Sbjct: 237 NPPYISTSNFCNGTTSRSVRKYEPVRALV 265


>gi|229094823|ref|ZP_04225828.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29]
 gi|229113777|ref|ZP_04243212.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3]
 gi|228669648|gb|EEL25055.1| hypothetical protein bcere0017_900 [Bacillus cereus Rock1-3]
 gi|228688566|gb|EEL42439.1| hypothetical protein bcere0020_890 [Bacillus cereus Rock3-29]
          Length = 213

 Score =  102 bits (254), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 75/205 (36%), Gaps = 43/205 (20%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKE 118
             TL    F    +  +     VD      +   +  DV   +LD+G G G + L+L KE
Sbjct: 34  EFTLRESRFTFLSDHGVFSKNEVDFGSRLLIEAFQMPDVKGNVLDVGCGYGPIGLSLAKE 93

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +AL +AK NA  N + E    LQS  + +V+G + VI+SNPP     
Sbjct: 94  FQDREIHMVDVNERALGLAKENAANNKI-ENVRILQSSVYENVDGKYAVILSNPPIRA-- 150

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I +    +L   G   + I   Q     + 
Sbjct: 151 -----------------------GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSALK 187

Query: 237 RI----------FESRKLFLVNAFK 251
           ++           + +  +++ + K
Sbjct: 188 KLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|229100900|ref|ZP_04231704.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28]
 gi|228682479|gb|EEL36552.1| hypothetical protein bcere0019_1050 [Bacillus cereus Rock3-28]
          Length = 199

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 75/205 (36%), Gaps = 43/205 (20%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKE 118
             TL    F    +  +     VD      +   +  DV   +LD+G G G + L+L KE
Sbjct: 20  EFTLRESRFTFLSDHGVFSKNEVDFGSRLLIEAFQMPDVKGNVLDVGCGYGPIGLSLAKE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +AL +AK NA  N + E    LQS  + +V+G + VI+SNPP     
Sbjct: 80  FQDREIHMVDVNERALGLAKENAANNKI-ENVRILQSSVYENVDGKYAVILSNPPIRA-- 136

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I +    +L   G   + I   Q     + 
Sbjct: 137 -----------------------GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSALK 173

Query: 237 RI----------FESRKLFLVNAFK 251
           ++           + +  +++ + K
Sbjct: 174 KLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|254226531|ref|ZP_04920114.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620935|gb|EAZ49286.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 240

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSAWAERIECQHADI 102

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPEAEGEDFIALAKQAGLF 182


>gi|227533723|ref|ZP_03963772.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227188707|gb|EEI68774.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 198

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 43/196 (21%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++R T  +  F        + +L+ + LA  LP         ILD+GTG G + LAL K
Sbjct: 25  HSLRFTSDNGVFSKHTVDFGSRVLIATILADELPAGP------ILDVGTGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +A+ NA  N +S     ++S  +  ++G F VIV+NPP    
Sbjct: 79  RFPDRQVTMSDVNERALALAQRNATDNDIS-NVTIVESSMYDQIDGQFGVIVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
             +                  G         I  G + HL   G     I   Q     +
Sbjct: 138 KTI----------------VSG---------ILAGAAEHLLPHGQLYAVIQKKQGAPSAL 172

Query: 237 RIFESRKLFLVNAFKD 252
           ++ +         ++D
Sbjct: 173 KLMK-------TIYQD 181


>gi|325267815|ref|ZP_08134465.1| methyltransferase [Kingella denitrificans ATCC 33394]
 gi|324980696|gb|EGC16358.1| methyltransferase [Kingella denitrificans ATCC 33394]
          Length = 367

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 67/188 (35%), Gaps = 29/188 (15%)

Query: 65  LTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           + +    F P R E   LV  A A S  R         +D+GTG+G +   L K S    
Sbjct: 162 IHVPFGVFSPIRGEYVELVRQAAAQSQAR-------TAMDIGTGSGVLAAMLAKHSA-AC 213

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               D + +A+  A  N    G+S R      D F++     D+IV NPP++ +     +
Sbjct: 214 ITATDNNPRAVACATDNIARLGLSSRVRVQMQDLFAN--ESADLIVCNPPWLPARPTSAI 271

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------EI-GYNQKVDVV 236
             E   +DP  +             +     RHLN  G   +      E  G     D+ 
Sbjct: 272 --ETALYDPDHA---------MLHALLHNAGRHLNDGGELWIVMSDLAEHLGLRAADDLQ 320

Query: 237 RIFESRKL 244
             F     
Sbjct: 321 NWFAQTGW 328


>gi|62182975|ref|YP_219392.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|81309498|sp|Q57G51|RSMC_SALCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|62130608|gb|AAX68311.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322717481|gb|EFZ09052.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 342

 Score =  101 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKARLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|16271987|ref|NP_438185.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           Rd KW20]
 gi|260580684|ref|ZP_05848511.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae RdAW]
 gi|1176480|sp|P44453|RSMC_HAEIN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|1572956|gb|AAC21690.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092746|gb|EEW76682.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae RdAW]
          Length = 330

 Score =  101 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+  
Sbjct: 210 KRTPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|291299303|ref|YP_003510581.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
 gi|290568523|gb|ADD41488.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
          Length = 378

 Score =  101 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 24/172 (13%)

Query: 57  WRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           W +    R+      F P R E   LV +A           +   + D+GTGTG +   L
Sbjct: 166 WVEALGERIHPRYGVFSPTRDEYVDLVAAA--------PLPEGATVFDIGTGTGVLAALL 217

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K     + V  DI+ +A+E A  N    G+ +R + +++D F    G  DV++ NPP++
Sbjct: 218 AKR--GARVVATDIAPRAVECAADNMTRLGLDDRVEVVEADLFPP--GRADVVLCNPPWL 273

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                  L   V D   R+ L G +DG          V+ HLN  G   + I
Sbjct: 274 PGTPNSTLDAAVFDHGGRM-LSGFLDG----------VAAHLNPGGEAWLVI 314


>gi|297528473|ref|YP_003669748.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|319765256|ref|YP_004130757.1| methyltransferase small [Geobacillus sp. Y412MC52]
 gi|297251725|gb|ADI25171.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|317110122|gb|ADU92614.1| methyltransferase small [Geobacillus sp. Y412MC52]
          Length = 200

 Score =  101 bits (253), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/215 (23%), Positives = 77/215 (35%), Gaps = 52/215 (24%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +L   +F   R T  S  F  R     T LL+++         E      +LD+G G G
Sbjct: 21  YVLRGHEF---RFTTDSGVFSKREVDFGTRLLIETF-------EEPGVAGDLLDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVI 168
            + LAL K  P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +
Sbjct: 71  PIGLALAKSFPNRRVHMIDVNERALELAQENKQANGIDNAV-IYKSDLFSEVGEQRFAAV 129

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           V+NPP                            G      I +    HL   G   V I 
Sbjct: 130 VTNPPIRA-------------------------GKRVVYAIFEQSRDHLLDHGELWVVIQ 164

Query: 229 YNQK------------VDVVRIFESRKLFLVNAFK 251
             Q               V  + + +  +++ A K
Sbjct: 165 KKQGAPSALQKLNECFPAVEVVAKKKGYYIIKAKK 199


>gi|167461259|ref|ZP_02326348.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322381135|ref|ZP_08055138.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321154711|gb|EFX46982.1| ribosomal RNA methyltransferase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 199

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 69/208 (33%), Gaps = 42/208 (20%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
                 +  T  SD      +    VD      +  +E     RILD+G G G + L   
Sbjct: 20  HASLRGIAFTFQSDAGVFSKKE---VDFGSRVLISAMELPKDARILDVGCGYGPIGLTAA 76

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
           K  P      +DI+ +A+E+AK NA  N +S     LQS+ F  V +  FDVI++NPP  
Sbjct: 77  KLCPAGHVTLIDINERAVELAKLNARNNHIS-NVTILQSNLFEHVRDQKFDVILTNPPIR 135

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK--- 232
                                     G      I       L   G   V I   Q    
Sbjct: 136 A-------------------------GKQVVHQIFSDSFDCLKPGGSLWVVIQKKQGAPS 170

Query: 233 --VDVVRIFES-------RKLFLVNAFK 251
               + ++F         +   +  A K
Sbjct: 171 AYAKLEQLFRQVHEVTKEKGYRIFQAIK 198


>gi|309779561|ref|ZP_07674322.1| methyltransferase [Ralstonia sp. 5_7_47FAA]
 gi|308921802|gb|EFP67438.1| methyltransferase [Ralstonia sp. 5_7_47FAA]
          Length = 384

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 87/231 (37%), Gaps = 36/231 (15%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVD 83
              SV+  R+   L  A     K   I  + G R      +      F P R E   LV 
Sbjct: 145 HAASVVSLRELLGLIGAHEWRKKGVEIPALGGER------IHPHYGVFSPVRGEYIELVA 198

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A                 D+GTGTG +   L K     + +G D   +AL  A+ N   
Sbjct: 199 NA--------PLPSKTLAFDIGTGTGVLAAVLAKRGVK-RVIGTDQDPRALACARENLAR 249

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+  + D + +D F   EG   +IV NPP++ +     +   V D D R+         
Sbjct: 250 LGLQAQVDVVDADLFP--EGRAPLIVCNPPWLPARPSSPIERAVYDPDSRM--------- 298

Query: 204 SHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              R   +G++ HL  +  G   +    E  G   +  ++ + ++  L +V
Sbjct: 299 --LRGFLEGLAAHLEPNGEGWLILSDFAEHLGLRTRDALLAMIDAAGLQVV 347


>gi|325990138|ref|YP_004249837.1| modification methylase, HemK family [Mycoplasma suis KI3806]
 gi|323575223|emb|CBZ40888.1| Modification methylase, HemK family [Mycoplasma suis]
          Length = 280

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 17/238 (7%)

Query: 37  FLTNAIVRSLKHE--SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
            L   +   +++    + R+ G   F   +  L    F PR E+ELLV   L   +  + 
Sbjct: 49  KLREKLCSRIQNIDYPLTRLTGRVFFNKKKWFLFQGVFSPRIESELLV-RILKDWVRELN 107

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                 I DL +G+G + L++L+E   +  +GV +D S +A +    N+     + + + 
Sbjct: 108 LYSFSYI-DLCSGSGVIFLSVLEELNNYIKRGVAIDSSFRACKNISKNSELLKDNSKIEI 166

Query: 153 LQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDF---DPRISLDGGIDGLSHYR 207
             +DW   +     +DVI  NPPY+    +    +E R+F   DP+ +L G I+G SHY+
Sbjct: 167 YLTDWVKYLTKNSEWDVITINPPYLSEEEL----IESREFCLGDPKWALQGDINGWSHYQ 222

Query: 208 TIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
            + +    + +   L   E   +++++    I +++ LF +  ++DY    R +   R
Sbjct: 223 KMLEFAKTN-SYWKLIIFECSEFHEQLWDKEIKKNKSLFTIRKYRDYLDKFRAIALIR 279


>gi|228905898|ref|ZP_04069795.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
 gi|228853713|gb|EEM98473.1| hypothetical protein bthur0013_890 [Bacillus thuringiensis IBL 200]
          Length = 213

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDVVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|308070985|ref|YP_003872590.1| hypothetical protein PPE_04288 [Paenibacillus polymyxa E681]
 gi|305860264|gb|ADM72052.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 200

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 71/204 (34%), Gaps = 44/204 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + R    S  F  +      +D      +  ++      +LD+G G G + L      P
Sbjct: 26  RSYRFASDSGVFSKQG-----IDYGSRVLIEAMQLPAQASVLDVGCGYGPIGLTAAALVP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
                 VDI+ +A+++A  NA  NGV       QSD F+ V+   FDVI++NPP      
Sbjct: 81  EGHVTMVDINERAVQLAIENAERNGVK-NVTIKQSDLFAEVKNERFDVILTNPPIRA--- 136

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV------ 233
                                 G     TI +    HLN+ G   V I   Q        
Sbjct: 137 ----------------------GKETVHTIFELAYEHLNEGGALWVVIQKKQGAPSASAK 174

Query: 234 ------DVVRIFESRKLFLVNAFK 251
                  V  + + +   ++ A K
Sbjct: 175 IESLFGHVEEVAKDKGYRILKAEK 198


>gi|229148510|ref|ZP_04276766.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
 gi|228634926|gb|EEK91499.1| hypothetical protein bcere0011_880 [Bacillus cereus m1550]
          Length = 213

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L  DG   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPDGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|228963201|ref|ZP_04124370.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228796459|gb|EEM43898.1| hypothetical protein bthur0004_920 [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 199

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 99  KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|218895236|ref|YP_002443647.1| ybxB protein [Bacillus cereus G9842]
 gi|218542476|gb|ACK94870.1| ybxB protein [Bacillus cereus G9842]
          Length = 199

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGN----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 99  KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|126465946|ref|YP_001041055.1| methyltransferase small [Staphylothermus marinus F1]
 gi|126014769|gb|ABN70147.1| methyltransferase small [Staphylothermus marinus F1]
          Length = 193

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 63/165 (38%), Gaps = 30/165 (18%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   T E    T L     VD      L  I+  D   +LD+G G G + L + K 
Sbjct: 16  IPLTIRGVTLEFVSYTSLFSGREVDKGTYLLLKYIDVPDEGEVLDVGCGYGVIGLTIAKL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +P  K   VDI+  A++I K NA  N + ++   LQ D +  V+   F+ I SNPP    
Sbjct: 76  NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVVVLQGDVYEPVKNLRFNAIYSNPPLSS- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                                   G+     I      +L  DG 
Sbjct: 135 ------------------------GMYTVEKIVLEAINYLKPDGF 155


>gi|213622584|ref|ZP_03375367.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
          Length = 277

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 94  WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 148

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 149 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 206

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 207 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 234


>gi|218231310|ref|YP_002364950.1| ybxB protein [Bacillus cereus B4264]
 gi|218159267|gb|ACK59259.1| ybxB protein [Bacillus cereus B4264]
          Length = 199

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGN----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 71  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L  DG   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPDGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|153806353|ref|ZP_01959021.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185]
 gi|149131030|gb|EDM22236.1| hypothetical protein BACCAC_00614 [Bacteroides caccae ATCC 43185]
          Length = 236

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
               +    ILD+GTGTG V L L + S P    V ++I   A E AK N V +   ++ 
Sbjct: 32  WTSVQGAHSILDVGTGTGLVALMLAQRSLPNTNIVALEIDEAAAEQAKENIVRSPWKKQI 91

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           + +Q+D+        FDVIVSNPPY ++S+                      D L+ Y  
Sbjct: 92  EVVQTDFRKYQSPEKFDVIVSNPPYFVDSLGCPDQQRNSARH---------NDSLT-YEE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLL 261
           + +GV+  L ++G  ++ I  +    V  I   +KL  V         GG   R L+
Sbjct: 142 LLEGVTGLLTENGTFTIVIPMDVADRVKMIASEKKLQAVRQLNVITKPGGIPKRTLI 198


>gi|75763956|ref|ZP_00743584.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74488558|gb|EAO52146.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 213

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGD----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDVVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|228898854|ref|ZP_04063136.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
           4222]
 gi|228860754|gb|EEN05132.1| hypothetical protein bthur0014_880 [Bacillus thuringiensis IBL
           4222]
          Length = 199

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGD----ILDVGCGYGPIGLSLAKEFQGREVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 99  KENAANNKI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDVVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|194444545|ref|YP_002043797.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|226712976|sp|B4T4F9|RSMC_SALNS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194403208|gb|ACF63430.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
          Length = 342

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNIFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|308160026|gb|EFO62538.1| DNA methyltransferase [Giardia lamblia P15]
          Length = 228

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 16/172 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+         ++      +++G+G+G V + +L+  P
Sbjct: 5   YEATLDDCRHVYLPDEDTFLLIDT----LTELSKELHPRSFVEIGSGSGVVSVHILQVFP 60

Query: 121 FF-KGVGVDISCKALEIAKSNAVTNGVSER------FDTLQSDWFSSVEGLFDVIVSNPP 173
              +G  VDIS  A+++ +  A  N V         F+ L +   SS    FD++V NPP
Sbjct: 61  GILEGHAVDISPYAVDMTRRTASLNSVPLCVHEGSFFEPLNACTNSSKPARFDLVVFNPP 120

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           Y+ S   D     +      ++L GG +G        + +  +L  DG C +
Sbjct: 121 YVPSSEADPALGPL-----DLALAGGKNGSEVMLRFLELLPSYLAIDGHCVM 167


>gi|145635202|ref|ZP_01790906.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|229845358|ref|ZP_04465489.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|145267481|gb|EDK07481.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|229811666|gb|EEP47364.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           6P18H1]
          Length = 330

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHPTLQDLTIYSLPGVFSATELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+  
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|290960213|ref|YP_003491395.1| methyltransferase [Streptomyces scabiei 87.22]
 gi|260649739|emb|CBG72855.1| putative methyltransferase [Streptomyces scabiei 87.22]
          Length = 260

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 65/175 (37%), Gaps = 27/175 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +TELLV      +L R       R+LD+GTGTGAV LA  +         VD
Sbjct: 11  PGVYAPQDDTELLV-----HALGREPLAPRARVLDVGTGTGAVALAAARR--GADVTAVD 63

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES---------- 177
           IS +A+   + NA+   +      ++ D    V    FD+I+SNPPY+            
Sbjct: 64  ISRRAVLNTRVNALLARLP--VTVVRGDLLGPVAERSFDLILSNPPYVPGPAQARRRGPG 121

Query: 178 -----VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                          R      +  GG DG      I       L   G+  +  
Sbjct: 122 PGPGAAPRPDRPGHARGA--ARAWHGGWDGRLLLDRICRDSPGLLRPGGVLLLVH 174


>gi|253744678|gb|EET00845.1| DNA methyltransferase [Giardia intestinalis ATCC 50581]
          Length = 228

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 22/175 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+         ++      +++G+G+G V + + +  P
Sbjct: 5   YKATLDDCKHVYLPDEDTFLLIDT----LTKLSKELQPQSFVEIGSGSGVVSVHIFQVFP 60

Query: 121 FF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--------GLFDVIVSN 171
              +G  +DIS  A+++ +  A  N V       +  +F  ++          FD+IV N
Sbjct: 61  KILEGHAIDISPYAVDMTRRTAALNNVPLLVH--EGSFFEPLDTRTDYPETARFDLIVFN 118

Query: 172 PPYIESVIVDCLGLEVRDFDPR-ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PPY+ S+  D       D  P  ++L GG +G        + +  HL  DG C +
Sbjct: 119 PPYVPSLETDP------DLGPLDLALAGGKNGSEIILQFLETLPSHLAVDGCCIM 167


>gi|310644213|ref|YP_003948972.1| methyltransferase small [Paenibacillus polymyxa SC2]
 gi|309249164|gb|ADO58731.1| Methyltransferase small [Paenibacillus polymyxa SC2]
          Length = 204

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 69/194 (35%), Gaps = 33/194 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + R    S  F  +      +D      +  ++      +LD+G G G + L      P
Sbjct: 26  RSYRFASDSGVFSKQG-----IDYGSRVLIEAMQLPTNASVLDVGCGYGPIGLTAATLVP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
                 VDI+ +A+++A  NA  NG+       QSD F+ V+   FDVI++NPP      
Sbjct: 81  DGHVTMVDINERAVQLAIENAERNGIK-NVTIKQSDLFAEVQHERFDVILTNPPIRA--- 136

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G     TI +    HLN+ G   V I   Q        
Sbjct: 137 ----------------------GKETVHTIFELAYEHLNEGGALWVVIQKKQGAPSASAK 174

Query: 239 FESRKLFLVNAFKD 252
            ES   ++    KD
Sbjct: 175 IESLFGYVEEVTKD 188


>gi|320088989|emb|CBY98745.1| 16S rRNA m2G 1207 methylse [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 342

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|167552222|ref|ZP_02345975.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205323159|gb|EDZ10998.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 342

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|145629135|ref|ZP_01784934.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145639699|ref|ZP_01795302.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittII]
 gi|260582074|ref|ZP_05849869.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
 gi|144978638|gb|EDJ88361.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145271256|gb|EDK11170.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittII]
 gi|260094964|gb|EEW78857.1| 16S ribosomal RNA methyltransferase [Haemophilus influenzae NT127]
 gi|309750669|gb|ADO80653.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2866]
          Length = 330

 Score =  100 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHSTLEDLTIYSLPGVFSAAELDTGTGLLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K SP  +    DI   ALE A+     N +    +   SD FS V+G FD+I+SNPP+ +
Sbjct: 210 KCSPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDVQGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            + +      HLN+ G  
Sbjct: 268 GIDTA---------------------YRAVKELIAQAKWHLNQGGEL 293


>gi|321222476|gb|EFX47548.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|293607190|ref|ZP_06689531.1| methyltransferase [Achromobacter piechaudii ATCC 43553]
 gi|292814282|gb|EFF73422.1| methyltransferase [Achromobacter piechaudii ATCC 43553]
          Length = 407

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 87/250 (34%), Gaps = 41/250 (16%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+        G        D   V   R+   L  A     K   I  +           
Sbjct: 156 DARQACEEAHG------PADEPYVASLRELLGLIGAYEWRKKGVEIAALNNR-------- 201

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      +PR          D+GTGTG +   + +     + +
Sbjct: 202 -IHPHYGVFSPLRGEYVDLVANTPMPR-----GSVAFDIGTGTGVLAAVIARRGGK-RVI 254

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +AL  A+ N    G+S++ D +++D F   EG   ++V NPP++ +     L  
Sbjct: 255 ATDLDPRALACARENLEQLGLSKQVDVVEADLFP--EGRVSLVVCNPPWLPARPSSPLEQ 312

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V D D R+            R   +G+  HL  +  G   +    E  G   +  ++ +
Sbjct: 313 AVYDPDSRM-----------LRGFLNGLPAHLTPNGEGWLILSDLAEHLGLRTREQLLEM 361

Query: 239 FESRKLFLVN 248
            ++  L ++ 
Sbjct: 362 IDAAGLRVIE 371


>gi|297527378|ref|YP_003669402.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
 gi|297256294|gb|ADI32503.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
          Length = 193

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 30/165 (18%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   T E    T L     VD      L  ++  D   +LD+G G G + L + K 
Sbjct: 16  IPLTIRGVTLEFVSYTSLFSGKEVDKGTYLLLKYMDIPDNGEVLDVGCGYGVIGLTIAKL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +P  K   VDI+  A++I K NA  N + ++   LQ D +   +   F+ I SNPP    
Sbjct: 76  NPRLKVYMVDINPLAVKITKYNAKLNNLEKQVSVLQGDAYEPFKNLRFNAIYSNPPLSS- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                                   G+S    I  G   +L  DG 
Sbjct: 135 ------------------------GMSTVEKIVLGAINYLKPDGF 155


>gi|168262394|ref|ZP_02684367.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205348826|gb|EDZ35457.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYSIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|156936955|ref|YP_001434751.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
 gi|156565939|gb|ABU81344.1| methyltransferase small [Ignicoccus hospitalis KIN4/I]
          Length = 194

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 61/174 (35%), Gaps = 33/174 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD   A     +E     ++LD+G G G + + + K +P  +   VD++  A++ AK NA
Sbjct: 39  VDLGTALLAEFMEIPKEGKVLDVGCGYGVLGILMAKLNPNLEVYMVDVNPVAVDAAKRNA 98

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             NGV  R   LQ + +   +      F  IVSNPP                      L 
Sbjct: 99  ELNGV--RVTVLQGNLYEPTDLLGIKDFSTIVSNPP----------------------LA 134

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            G       + I +G    L   G   + +          + E      V   +
Sbjct: 135 AGK---EVVKEIIEGAPARLKSGGSLQL-VMAQGGDWAKGVMEEY-FKEVEVKR 183


>gi|56416330|ref|YP_153405.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197365253|ref|YP_002144890.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|81821528|sp|Q5PK16|RSMC_SALPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712978|sp|B5BL07|RSMC_SALPK RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|56130587|gb|AAV80093.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096730|emb|CAR62353.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|205355276|ref|YP_002229077.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|226712974|sp|B5R9T9|RSMC_SALG2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|205275057|emb|CAR40145.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326630441|gb|EGE36784.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|161617866|ref|YP_001591830.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|226712977|sp|A9N7C4|RSMC_SALPB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|161367230|gb|ABX70998.1| hypothetical protein SPAB_05733 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYSIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|288559415|ref|YP_003422901.1| SAM-dependent methyltransferase HemK-related protein
           [Methanobrevibacter ruminantium M1]
 gi|288542125|gb|ADC46009.1| SAM-dependent methyltransferase HemK-related protein
           [Methanobrevibacter ruminantium M1]
          Length = 194

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +      + P  +T LL ++        +E ++   +L++GTG+G   +++        
Sbjct: 5   EIETDDLVYIPSDDTFLLAEN--------LEIKEGQSVLEIGTGSG--LVSMYASLLTDD 54

Query: 124 GVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
               DI+  ALE+A+ N   N ++  R +    D F  V+   FDVI+ N PY+ +   D
Sbjct: 55  VTATDINYNALELAEKNFKLNDINTIRLEF--GDLFEPVKNEKFDVILFNTPYLPTDTDD 112

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  +  ++    + DGGIDG        + VS +LN  G+  +
Sbjct: 113 IIDDD-LNY----AFDGGIDGRKVIDRFINEVSHYLNDGGIVQI 151


>gi|168822095|ref|ZP_02834095.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205341377|gb|EDZ28141.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|145633431|ref|ZP_01789161.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           3655]
 gi|144985994|gb|EDJ92596.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           3655]
          Length = 330

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D      L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHSTLENLTIYSLPGVFSAAELDIGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS++EG FD+I+SNPP+  
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSNIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|323352583|gb|EGA85082.1| Mtq1p [Saccharomyces cerevisiae VL3]
          Length = 195

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 6/142 (4%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +  A ++  KH  +  IL  + F  + +        PR ETE  V + +      +  R 
Sbjct: 49  IRWACLQRYKHVPLQYILRSQPFGALDIVCKPGVLIPRWETEEWVMAIIRALNNSMLSRH 108

Query: 98  --VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
              + I D  TGTG + LAL           +D+S +A+++ K N + N VS     + +
Sbjct: 109 TIPLHICDTFTGTGCIALALSHGIANCTFTAIDVSTRAIKLVKENMLKNKVSGGKLVQHN 168

Query: 152 TLQSDWFSSVEGLFDVIVSNPP 173
            L S          D++  NPP
Sbjct: 169 ILSSKASDEYPSHIDILTGNPP 190


>gi|229067866|ref|ZP_04201183.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185]
 gi|229176701|ref|ZP_04304105.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W]
 gi|228606744|gb|EEK64161.1| hypothetical protein bcere0005_880 [Bacillus cereus 172560W]
 gi|228715225|gb|EEL67084.1| hypothetical protein bcere0025_900 [Bacillus cereus F65185]
          Length = 213

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 32  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGD----ILDVGCGYG 84

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 85  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 143

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L  DG   + I  
Sbjct: 144 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPDGELWIVIQK 178

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 179 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|238910715|ref|ZP_04654552.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|322615721|gb|EFY12641.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620569|gb|EFY17429.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322621804|gb|EFY18654.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627529|gb|EFY24320.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322630836|gb|EFY27600.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637946|gb|EFY34647.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322642216|gb|EFY38824.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644937|gb|EFY41469.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651101|gb|EFY47486.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656643|gb|EFY52931.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658699|gb|EFY54956.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322661859|gb|EFY58075.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666395|gb|EFY62573.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672449|gb|EFY68561.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676243|gb|EFY72314.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322679668|gb|EFY75713.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684378|gb|EFY80382.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323191860|gb|EFZ77109.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196669|gb|EFZ81816.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323200938|gb|EFZ86007.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323209335|gb|EFZ94268.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323212978|gb|EFZ97780.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323216721|gb|EGA01446.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323223319|gb|EGA07656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323226154|gb|EGA10371.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323228807|gb|EGA12936.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236582|gb|EGA20658.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323239918|gb|EGA23965.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242035|gb|EGA26064.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323247524|gb|EGA31479.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323250626|gb|EGA34508.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323259355|gb|EGA42997.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323263767|gb|EGA47288.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265639|gb|EGA49135.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323270084|gb|EGA53532.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|168230199|ref|ZP_02655257.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168234688|ref|ZP_02659746.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194471541|ref|ZP_03077525.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194736271|ref|YP_002117470.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197251566|ref|YP_002149497.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|226712970|sp|B5F512|RSMC_SALA4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712979|sp|B4TU29|RSMC_SALSV RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194457905|gb|EDX46744.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194711773|gb|ACF90994.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197215269|gb|ACH52666.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197291795|gb|EDY31145.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|205335077|gb|EDZ21841.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|16767797|ref|NP_463412.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|197263702|ref|ZP_03163776.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242075|ref|YP_002218430.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|207859682|ref|YP_002246333.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|81853618|sp|Q8ZJW6|RSMC_SALTY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712972|sp|B5FTB3|RSMC_SALDC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712973|sp|B5R2I6|RSMC_SALEP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|16423121|gb|AAL23371.1| 16S ribosomal rRNA [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|197241957|gb|EDY24577.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197936591|gb|ACH73924.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|206711485|emb|CAR35870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261249638|emb|CBG27508.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996916|gb|ACY91801.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301161036|emb|CBW20573.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312915650|dbj|BAJ39624.1| 16S rRNA methyltransferase C [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|323132895|gb|ADX20325.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|326626237|gb|EGE32582.1| Ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
 gi|332991362|gb|AEF10345.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 342

 Score =  100 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|168464529|ref|ZP_02698432.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|195632765|gb|EDX51219.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYSIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|213029544|ref|ZP_03343991.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 229

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 46  WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 100

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 101 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 158

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 159 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 186


>gi|168244550|ref|ZP_02669482.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|194448966|ref|YP_002048576.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|226712975|sp|B4TGY8|RSMC_SALHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194407270|gb|ACF67489.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|205336629|gb|EDZ23393.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYSIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|200387205|ref|ZP_03213817.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199604303|gb|EDZ02848.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|312866659|ref|ZP_07726873.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
 gi|311097740|gb|EFQ55970.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
          Length = 194

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 38/200 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  ++ ++   +LD+G G G + L
Sbjct: 20  LLGQK----MNFYTDAGVF-----SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VD++ +AL++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 71  SLAKAQGVA-VTMVDVNERALDLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      +  G   HL   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKKVVHQVITGSFEHLKPGGDLTIVIQKKQGA 162

Query: 233 VDVVRIFESRKLFLVNAFKD 252
                  E          KD
Sbjct: 163 PSAKAKMEETFGNCETVKKD 182


>gi|258540448|ref|YP_003174947.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
           705]
 gi|257152124|emb|CAR91096.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus rhamnosus Lc
           705]
          Length = 198

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 37/195 (18%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +R T  +  F        + +L+ + LA +LP         ILD+G G G + L L K
Sbjct: 25  HRLRFTTDNGVFSKHTVDFGSRVLIAAVLAETLPDGP------ILDVGAGYGPIGLPLAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +    D++ +AL +AK NA  NG++     ++S  + S++  F V+V+NPP    
Sbjct: 79  HFPNRQVTMSDVNERALALAKQNAADNGIT-NVSIIESSMYDSIDDQFAVVVTNPPIRAG 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                            ++  G         I  G + HL   G     I   Q     +
Sbjct: 138 K----------------AIVSG---------ILSGAAAHLLPGGQLYAVIQKKQGAPSAL 172

Query: 237 RIFESRKLFLVNAFK 251
           ++ ++         K
Sbjct: 173 KLMKAT-YANAEVIK 186


>gi|213859939|ref|ZP_03385643.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 245

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 62  WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 116

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 117 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 174

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 175 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 202


>gi|206972250|ref|ZP_03233197.1| ybxB protein [Bacillus cereus AH1134]
 gi|228950649|ref|ZP_04112783.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|229077398|ref|ZP_04210055.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2]
 gi|206732824|gb|EDZ49999.1| ybxB protein [Bacillus cereus AH1134]
 gi|228705911|gb|EEL58240.1| hypothetical protein bcere0023_1120 [Bacillus cereus Rock4-2]
 gi|228809000|gb|EEM55485.1| hypothetical protein bthur0006_890 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 199

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 52/214 (24%)

Query: 57  WRDF--YNVRLTLSSDTFEPRP-----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             +F     R T  SD            + LL++   AF +P I+      ILD+G G G
Sbjct: 18  RWEFALRGSRFTFLSDHGVFSKNEVDFGSRLLIE---AFQMPDIKGD----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + L+L KE    +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+
Sbjct: 71  PIGLSLAKEFQGREVHMVDVNERALGLAKENAANNKI-ENIRIFQSSVYENVDGKYAAIL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           SNPP                            G      I +    +L  DG   + I  
Sbjct: 130 SNPPIRA-------------------------GKDIVHEILEKAVEYLVPDGELWIVIQK 164

Query: 230 NQKV--DVVRI----------FESRKLFLVNAFK 251
            Q     + ++           + +  +++ + K
Sbjct: 165 KQGAPSALKKLEEVFSEVEVVEKKKGYYIIKSKK 198


>gi|253577170|ref|ZP_04854490.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843414|gb|EES71442.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 201

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 72/193 (37%), Gaps = 33/193 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + R    +  F         VD      +  ++  +   +LD+G G G + LA  + +  
Sbjct: 27  SYRFVSDAGVFAKGG-----VDFGSRTLIEAMDIPEDAEVLDVGCGYGPIGLAAARLATK 81

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
                +D++ +A+E+AK NA  NGV      L+SD FS++E   FDV+++NPP       
Sbjct: 82  GHVTMIDVNSRAVELAKENAAANGV-NNVTVLESDLFSAIENRKFDVVLTNPPIRA---- 136

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIF 239
                                G +    I +G    L   G   V I   Q         
Sbjct: 137 ---------------------GKATVHAIFEGAYERLRSGGSLWVVIQKKQGAPSAKEKL 175

Query: 240 ESRKLFLVNAFKD 252
           ES    +V   KD
Sbjct: 176 ESLFSRVVEVTKD 188


>gi|204927148|ref|ZP_03218350.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|204323813|gb|EDZ09008.1| ribosomal RNA small subunit methyltransferase C [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|224053643|ref|XP_002297908.1| predicted protein [Populus trichocarpa]
 gi|222845166|gb|EEE82713.1| predicted protein [Populus trichocarpa]
          Length = 228

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 32/209 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA     ++    +  L++G G+G    ++ L L +E P   
Sbjct: 19  HPEVYEPCDDSFALVDALLADRTNILDHCPRL-CLEVGCGSGYVIASLALMLGQELPGVY 77

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
               DI+  AL + +     + V    + +  D  S +E    G+ DV+V NPPY+ +  
Sbjct: 78  YFATDINPHALRVTRETLDAHAVDA--ELMCMDIASGLEKRLAGMVDVMVVNPPYVPTPD 135

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------------ 227
                 EV       +  GG +G      I     R L+  G   +              
Sbjct: 136 Y-----EVGREGIASAWAGGENGRIVIDRILPVADRLLSDKGWLYMVTLTTNDPSQICLL 190

Query: 228 ----GYNQKVDVVRIFESRKLFLVNAFKD 252
               GY  ++ V R  E   L ++  ++D
Sbjct: 191 MRKKGYASRIVVQRSTEEESLHIIKFWRD 219


>gi|16763351|ref|NP_458968.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29144829|ref|NP_808171.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|213051998|ref|ZP_03344876.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213419349|ref|ZP_03352415.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213427560|ref|ZP_03360310.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213650120|ref|ZP_03380173.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|289828938|ref|ZP_06546656.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|81853154|sp|Q8Z0V2|RSMC_SALTI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|25513266|pir||AH1071 conserved hypothetical protein STY4906 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505660|emb|CAD03391.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29140468|gb|AAO72031.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 342

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G  RHLN  G  
Sbjct: 272 H---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|228937403|ref|ZP_04100049.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970289|ref|ZP_04130948.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976859|ref|ZP_04137271.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
 gi|228782829|gb|EEM30995.1| hypothetical protein bthur0002_870 [Bacillus thuringiensis Bt407]
 gi|228789398|gb|EEM37318.1| hypothetical protein bthur0003_870 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822236|gb|EEM68218.1| hypothetical protein bthur0008_880 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 213

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGD----ILDVGCGYGPIGLSLAKEFQGCEVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNRI-ENIRIFQSSVYENVDGEYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKLF 245
               G      I +    +L   G   + I   Q        +  +F       + +  +
Sbjct: 151 ----GKDIVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEIVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|218884457|ref|YP_002428839.1| Ribosomal RNA small subunit methyltransferase C (RRNA
           (Guanine-n2-)- methyltransferase) [Desulfurococcus
           kamchatkensis 1221n]
 gi|218766073|gb|ACL11472.1| Ribosomal RNA small subunit methyltransferase C (RRNA
           (Guanine-n2-)- methyltransferase) [Desulfurococcus
           kamchatkensis 1221n]
          Length = 200

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 32/175 (18%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           G R  ++   T+   TFE    T L     +D      L  I       +LD+G G G +
Sbjct: 18  GERKLFS--FTIHGYTFEFISYTSLFSGSSLDDGTRLLLENIMVPRSGVVLDIGCGYGVI 75

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVS 170
            + + K +P  +    D++  A+++A+ NA  N V +R   LQ D +  VEG  F+ I S
Sbjct: 76  GIVVAKLNPLLEVYMTDVNPLAVKVARLNASRNNVEDRVVVLQGDRYKPVEGMKFNAIYS 135

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           NP                   P  +      G+     I  G  R+L +DG    
Sbjct: 136 NP-------------------PLSA------GMRIVEDIVLGARRYLTEDGFAQF 165


>gi|322389699|ref|ZP_08063246.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
           903]
 gi|321143538|gb|EFX38969.1| methyltransferase domain protein [Streptococcus parasanguinis ATCC
           903]
          Length = 197

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 74/199 (37%), Gaps = 39/199 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  ++ ++   +LD+G G G + L
Sbjct: 23  LLGQK----MNFYTDAGVF-----SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VD++ +AL++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 74  SLAKAQGVA-VTMVDVNERALDLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      +  G   HL   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKRVVHQVITGSFEHLKPGGDLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E          K
Sbjct: 166 PSAKAKMEET-FGNCEIVK 183


>gi|283835035|ref|ZP_06354776.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
           youngae ATCC 29220]
 gi|291069324|gb|EFE07433.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Citrobacter
           youngae ATCC 29220]
          Length = 343

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +     + D Y   N+ +      F
Sbjct: 117 GVRSAEQMLAEYAPLNKIDSARRCGLYHGRLEKQPVFDAEKYWDEYQTENLTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +AL   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLSPHTKGKVLDVGCGAGVLSVALASHSPKVRLTLCDVSAA 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV      + S+ FS V G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEGNV--IASNVFSDVTGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGLQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|256005297|ref|ZP_05430263.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|255990733|gb|EEU00849.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|316939532|gb|ADU73566.1| methyltransferase small [Clostridium thermocellum DSM 1313]
          Length = 196

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++    +  F  R      VD      +  +   D   ILD+G G G + ++L   +P  
Sbjct: 27  IKFNTDAGVFSKRR-----VDFGSDLLIRSVPPLDG-SILDIGCGYGVIGISLALLNPSS 80

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +DI+ +A+++A  N   NGV+     L SD FS+V   FD IVSNPP         
Sbjct: 81  FVTMIDINERAVDLASQNIHLNGVT-NATALTSDGFSNVSDKFDAIVSNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                              G      I      HLN  G   + I   Q  
Sbjct: 134 -------------------GKKVIYPIFADSINHLNPGGSIYLVIQKKQGA 165


>gi|125975416|ref|YP_001039326.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
 gi|281419377|ref|ZP_06250392.1| methyltransferase [Clostridium thermocellum JW20]
 gi|125715641|gb|ABN54133.1| 16S rRNA m(2)G 1207 methyltransferase [Clostridium thermocellum
           ATCC 27405]
 gi|281406997|gb|EFB37260.1| methyltransferase [Clostridium thermocellum JW20]
          Length = 196

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++    +  F  R      VD      +  +   D   ILD+G G G + ++L   +P  
Sbjct: 27  IKFNTDAGVFSKRR-----VDFGSDLLIRSVPPLDG-SILDIGCGYGVIGISLALLNPSS 80

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +DI+ +A+++A  N   NGV+     L SD FS+V   FD IVSNPP         
Sbjct: 81  FVTMIDINERAVDLASQNIHLNGVT-NATALTSDGFSNVSDKFDAIVSNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                              G      I      HLN  G   + I   Q  
Sbjct: 134 -------------------GKKVIYPIFADSINHLNPGGSIYLVIQKKQGA 165


>gi|225468789|ref|XP_002262890.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 320

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 28/213 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKE 118
            R++   + +EP  ++  LVD+ LA     +E    +  +++G G+G    ++ L L +E
Sbjct: 73  RRVSSHPEVYEPCDDSFALVDALLADRTNLLEHHPAL-CMEVGCGSGYVITSLALILGQE 131

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +     +  DI+  A+ + +     +GV        + S    S+ G+ DV+V NPPY+ 
Sbjct: 132 AQGIHYLATDINPHAVRVTQETLEAHGVHAELINTDIASGLEKSLAGMVDVMVVNPPYVP 191

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----------- 225
           +        EV       S  GG +G S    I       L+  G   +           
Sbjct: 192 TPE-----DEVGRDGITSSWAGGENGRSVINKILPIADNLLSDKGWLYMVTLTANNPTQI 246

Query: 226 -----EIGYNQKVDVVRIFESRKLFLVNAFKDY 253
                E+G+  ++ V R  E   L ++  ++D 
Sbjct: 247 CLQMRELGFASRIVVQRSTEEESLHVIKFWRDI 279


>gi|255583924|ref|XP_002532710.1| n6-DNA-methyltransferase, putative [Ricinus communis]
 gi|223527556|gb|EEF29677.1| n6-DNA-methyltransferase, putative [Ricinus communis]
          Length = 256

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 28/207 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA  +  ++    V   ++G G+G    ++ L L ++ P   
Sbjct: 14  HPEVYEPCDDSFALVDALLADRINLLDHNPKV-CFEVGCGSGYVITSLALMLRQQIPGVY 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  D++  A+ + +     +GV        + S     ++G+ DV+V NPPY+ +    
Sbjct: 73  YIATDLNPHAVRVTRETLEAHGVHAELISTDIASGLEKRLQGMVDVMVVNPPYVPTPE-- 130

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-------------- 227
               EV       +  GG +G      I       L++ G   +                
Sbjct: 131 ---DEVGCEGIASAWAGGENGRKVIDRILHVADCLLSEKGWLYMVTITCNDPSQLCLKMR 187

Query: 228 --GYNQKVDVVRIFESRKLFLVNAFKD 252
             GY  ++ V R  E   L ++  ++D
Sbjct: 188 KKGYASRIVVQRSTEEESLHIIKFWRD 214


>gi|319774960|ref|YP_004137448.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3047]
 gi|329123138|ref|ZP_08251708.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
           11116]
 gi|317449551|emb|CBY85756.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3047]
 gi|327471693|gb|EGF17135.1| rRNA (guanine-N(2)-)-methyltransferase [Haemophilus aegyptius ATCC
           11116]
          Length = 330

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   +++DLG G G +   + 
Sbjct: 150 WKTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVIDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS++EG FD+I+SNPP+ +
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSNIEGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            + +      HLN+ G  
Sbjct: 268 GIDTAYRT---------------------VKELITQAKWHLNQGGEL 293


>gi|326937895|gb|AEA13791.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 199

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGD----ILDVGCGYGPIGLSLAKEFQGCEVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 99  KENAANNRI-ENIRIFQSSVYENVDGEYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKLF 245
               G      I +    +L   G   + I   Q        +  +F       + +  +
Sbjct: 137 ----GKDIVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEIVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|237729269|ref|ZP_04559750.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
 gi|226908998|gb|EEH94916.1| 16S ribosomal RNA methyltransferase [Citrobacter sp. 30_2]
          Length = 343

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +     + D Y   N+ +      F
Sbjct: 117 GVRSAEQMLAEYAPLNKVDSARRCGLYHGRLEKQPVFDAEKYWDEYQTENLTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +AL   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVALASHSPKVRLTLCDVSAA 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NG+    D + S+ FS V G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGIEG--DVIASNVFSDVTGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|167465651|ref|ZP_02330740.1| possible 16S rRNA methyltransferase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 171

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 61/178 (34%), Gaps = 30/178 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
                 +  T  SD      +    VD      +  +E     RILD+G G G + L   
Sbjct: 20  HASLRGIAFTFQSDAGVFSKKE---VDFGSRVLISAMELPKDARILDVGCGYGPIGLTAA 76

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYI 175
           K  P      +DI+ +A+E+AK NA  N +S     LQS+ F  V +  FDVI++NPP  
Sbjct: 77  KLCPAGHVTLIDINERAVELAKLNARNNHIS-NVTILQSNLFEHVRDQKFDVILTNPPIR 135

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                     G      I       L   G   V I   Q  
Sbjct: 136 A-------------------------GKQVVHQIFSDSFDCLKPGGSLWVVIQKKQGA 168


>gi|226366125|ref|YP_002783908.1| methyltransferase [Rhodococcus opacus B4]
 gi|226244615|dbj|BAH54963.1| putative methyltransferase [Rhodococcus opacus B4]
          Length = 223

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 67/178 (37%), Gaps = 15/178 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL +      L   +     R+LDL  GTGA+ +        +    VD
Sbjct: 6   PGVYRPQRDTWLLAE-----VLAARDLGPGTRVLDLCCGTGALSVEACAAGAGW-VTAVD 59

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A      NA  N  + R   ++ D   +V    FDV+V+NPPY  +   D     V
Sbjct: 60  VSRRAAISTWLNATLNRRTIRV--VRGDLVDAVRTLRFDVVVANPPYAPATD-DGRPGRV 116

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKL 244
                  + DGG+DG +    I       L   G   +             + E R L
Sbjct: 117 L----ARAWDGGVDGRAVLDRICSETPELLAPGGTLLLVQSTLNGVEKTRAMLEERGL 170


>gi|301168613|emb|CBW28203.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae 10810]
          Length = 330

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           WR + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WRTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +E  FD+I+SNPP+  
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEEKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|159112999|ref|XP_001706727.1| DNA methyltransferase [Giardia lamblia ATCC 50803]
 gi|157434826|gb|EDO79053.1| DNA methyltransferase [Giardia lamblia ATCC 50803]
          Length = 220

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 20/173 (11%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y   L      + P  +T LL+D+          +      +++G+G+G V + +L+  P
Sbjct: 5   YEATLDDCKHVYLPDEDTFLLIDT----LTKLSGELHPQSFVEIGSGSGVVSVHILQVFP 60

Query: 121 FFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVSN 171
             + G  VDIS  A+++ +  A  N V       +  +F  ++          FD+IV N
Sbjct: 61  GIREGHAVDISPHAVDMTRRTASLNNVPLCVH--EGSFFEPLDAYTNSSKATRFDLIVFN 118

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           PPY+ S   D     +      ++L GG +G        + +  +L  DG C 
Sbjct: 119 PPYVPSSETDPALGPL-----DLALAGGKNGSEVMLKFFELLPSYLALDGHCV 166


>gi|124486387|ref|YP_001031003.1| hypothetical protein Mlab_1572 [Methanocorpusculum labreanum Z]
 gi|124363928|gb|ABN07736.1| putative methylase [Methanocorpusculum labreanum Z]
          Length = 193

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 21/178 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +S  + P  +T LL+ +A      R E +   R+L++GTG+GAV  ++ + +P    + V
Sbjct: 5   TSQIYFPAEDTYLLIKAA------RTEVKQEDRVLEIGTGSGAVAKSVAEITPA--VLAV 56

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +I+  A + A+            + ++ D F  V G FD+I+ N PY+ +   +     +
Sbjct: 57  EINPHAAQYARE-------VNGIEVIRGDLFDPVCGEFDLILFNAPYLPTDPAERFDDWL 109

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKL 244
                  +LDGG  G              L   G   + I       +++++  ++  
Sbjct: 110 -----EYALDGGPSGRDVVERFLREAPSRLATFGRILLLISSLTGMNEILKLCHAQGF 162


>gi|262191214|ref|ZP_06049413.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93]
 gi|262032916|gb|EEY51455.1| predicted O-methyltransferase [Vibrio cholerae CT 5369-93]
          Length = 240

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|319896430|ref|YP_004134623.1| ribosomal RNA small subunit methyltransferase c [Haemophilus
           influenzae F3031]
 gi|317431932|emb|CBY80280.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae F3031]
          Length = 330

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +    D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHSTLENLTIYSLPGVFSAAESDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+ +
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            + +      HLN+ G  
Sbjct: 268 GIDTAYRT---------------------VKELITQAKWHLNQGGEL 293


>gi|307136455|gb|ADN34260.1| N6-DNA-methyltransferase [Cucumis melo subsp. melo]
          Length = 256

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 32/209 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA    ++   +    L+ G G+G    ++ L L KE+    
Sbjct: 15  HREVYEPCDDSFALVDALLAD-RVKLLNHNPTLCLEFGCGSGYVITSLALILGKEASATH 73

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            +  DI+  A+ + +     +G+    + + +D  S +E    G  DV+V NPPY+ +  
Sbjct: 74  YIATDINPHAIRVTQETLEAHGL--HAELVCTDLASGLEKRLAGSVDVLVVNPPYVPTPE 131

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-------------- 225
                 EV       +  GG +G S    I       L+  G   +              
Sbjct: 132 -----DEVGQDGIASAWAGGENGRSVIDRILPVADVLLSDKGWLYMVTLTANNPFQICLQ 186

Query: 226 --EIGYNQKVDVVRIFESRKLFLVNAFKD 252
             E GY  ++ V R  E   L ++  +KD
Sbjct: 187 MREKGYASRIVVQRSTEEESLHVIKFWKD 215


>gi|322373099|ref|ZP_08047635.1| methyltransferase domain protein [Streptococcus sp. C150]
 gi|321278141|gb|EFX55210.1| methyltransferase domain protein [Streptococcus sp. C150]
          Length = 196

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 32/180 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D +++++ L  ++F+   +  +    ++D      L  ++  D   +LD+G G G + +
Sbjct: 14  HDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLNSLDLEDGKTLLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   +DI+ +A+++AK NA  N V    D  QS+ + +V G FD I+SNPP
Sbjct: 74  SLAK-VQGVKVTMIDINSRAIDLAKQNAERNKVD--VDIFQSNIYENVTGNFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      + +    HLN+ G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHQVIEEAYDHLNQGGTLTIVIQKKQGA 165


>gi|138893776|ref|YP_001124229.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196251113|ref|ZP_03149792.1| methyltransferase small [Geobacillus sp. G11MC16]
 gi|134265289|gb|ABO65484.1| 16S rRNA m(2)G 1207 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196209354|gb|EDY04134.1| methyltransferase small [Geobacillus sp. G11MC16]
          Length = 200

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 75/207 (36%), Gaps = 49/207 (23%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  R T  S  F  R     T LL+++         E      +LD+G G G + LAL K
Sbjct: 26  HEFRFTTDSGVFSKREVDFGTRLLIETF-------QEPDVAGDLLDVGCGYGPIGLALAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
             P  +   +D++ +ALE+A+ N   NG+       +SD FS V E  F  +++NPP   
Sbjct: 79  SFPDRRVQMIDVNERALELAEENKQANGIHNAI-IYKSDLFSEVGEQRFAAVITNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--- 233
                                    G      I +    HL  +G   V I   Q     
Sbjct: 138 -------------------------GKRVVHAIFEQSRAHLVDNGELWVVIQKKQGAPSA 172

Query: 234 ---------DVVRIFESRKLFLVNAFK 251
                     V  + + +  +++ A K
Sbjct: 173 LQKLKEWFVAVEVVAKKKGYYIIKAKK 199


>gi|293365627|ref|ZP_06612336.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
 gi|291315995|gb|EFE56439.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
          Length = 196

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E  +   +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  +EG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQIEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSREFLKDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSARNKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|229530467|ref|ZP_04419855.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)]
 gi|229332240|gb|EEN97728.1| predicted O-methyltransferase [Vibrio cholerae 12129(1)]
 gi|327483460|gb|AEA77867.1| Predicted O-methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 240

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHTDI 102

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      ++      L H + + + + + 
Sbjct: 103 LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------AMARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|229512922|ref|ZP_04402389.1| predicted O-methyltransferase [Vibrio cholerae TMA 21]
 gi|229350171|gb|EEO15124.1| predicted O-methyltransferase [Vibrio cholerae TMA 21]
          Length = 240

 Score = 99.8 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQLSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QDLIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|153826532|ref|ZP_01979199.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739712|gb|EDM53919.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 240

 Score = 99.8 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQLSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|15897324|ref|NP_341929.1| hypothetical protein SSO0392 [Sulfolobus solfataricus P2]
 gi|284173336|ref|ZP_06387305.1| hypothetical protein Ssol98_01585 [Sulfolobus solfataricus 98/2]
 gi|13813541|gb|AAK40719.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601999|gb|ACX91602.1| methyltransferase small [Sulfolobus solfataricus 98/2]
          Length = 186

 Score = 99.8 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 38/182 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I+  +   + D+G G G + + L  ++P  K   VD++  A+++AK NA 
Sbjct: 31  DLGTRILLENIKVAENGTVADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAK 90

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NGV  R   ++SD F    ++  F  I SNPP                           
Sbjct: 91  LNGVENRTIIVKSDIFDNIPIDVKFTAIYSNPPL-------------------------S 125

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----------ESRKLFLVNAF 250
            G+   + +       L + G   + I Y  + ++ +IF            +   L+   
Sbjct: 126 KGVDFLKKLEAEAYDRLVEKGFIQL-IAYKGEENIEKIFSKRFKIESIKRKKGYSLITIV 184

Query: 251 KD 252
           KD
Sbjct: 185 KD 186


>gi|307703575|ref|ZP_07640517.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
 gi|307622982|gb|EFO01977.1| methyltransferase domain protein [Streptococcus oralis ATCC 35037]
          Length = 193

 Score = 99.8 bits (248), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E  +   +LD+G G G + L
Sbjct: 20  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  +EG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQIEGKFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSREFLKDGGDLTIVIQKKQGA 162

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 163 PSARNKMEDVFGNCEIVKKDKGYYILRSVK 192


>gi|229159274|ref|ZP_04287298.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
 gi|228624166|gb|EEK80968.1| hypothetical protein bcere0009_870 [Bacillus cereus R309803]
          Length = 158

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      ILD+G G G + L+L KE        VD++ +AL +A
Sbjct: 5   SRLLIE---AFQMPDIKGD----ILDVGCGYGPIGLSLAKEFQGCNVHMVDVNERALGLA 57

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E     QS  + +V+G +  I+SNPP                        
Sbjct: 58  KENAANNRI-ENIRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 95

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 96  ----GKDIVHEILEKAVEYLVPGGELWIVIQKKQGAPSALKKLEEVFSEVEVVEKKKGYY 151

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 152 IIKSKK 157


>gi|261187578|ref|XP_002620208.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239594099|gb|EEQ76680.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 494

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 75/244 (30%), Gaps = 81/244 (33%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL---- 90
           +  L   + +  +   +  ILG + F  + +        PRPETE          L    
Sbjct: 80  KLRLRRMVQQRARGVPLQYILGDQPFGELEILCRRGVLIPRPETEAYTTRVANLLLSKFA 139

Query: 91  --------------PRIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCK 132
                          R +    +RILDL TGTG + L L        P  +  GVDIS +
Sbjct: 140 PAKRKHKHEHEHEHDRFKHLPNLRILDLCTGTGCIPLLLHSLLSPVFPKLQIRGVDISPR 199

Query: 133 ALEIAKSNAVTNGVSERFD--------TLQSDWFSSV----------------------- 161
           AL +A+ N   N    R D         ++ D  S +                       
Sbjct: 200 ALRLARDNLKHNIKLGRLDERAREEVSFVRGDVLSELGAGDNLHLASNAVWRGGKLAHFT 259

Query: 162 --------------------------EGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPR 193
                                          +++SNPPYI             VR F+P+
Sbjct: 260 TAAGGNFSSSSSSNISTPTSTSPETDTNTITILLSNPPYISPAQFTNGTTTRSVRKFEPK 319

Query: 194 ISLD 197
           ++L 
Sbjct: 320 LALV 323


>gi|327354065|gb|EGE82922.1| S-adenosylmethionine-dependent methyltransferase [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 494

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/244 (20%), Positives = 79/244 (32%), Gaps = 81/244 (33%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSL 90
           +  L   + +  +   +  ILG + F  + +        PRPETE     + +  L+   
Sbjct: 80  KLRLRRMVQQRARGVPLQYILGDQPFGELEILCRRGVLIPRPETEAYTTCVANLLLSKFA 139

Query: 91  P--------------RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCK 132
           P              R +    +RILDL TGTG + L L        P  +  GVDIS +
Sbjct: 140 PAKRKHKHEHEHEHDRFKHLPNLRILDLCTGTGCIPLLLHSLLSPVFPKLQIRGVDISPR 199

Query: 133 ALEIAKSNAVTNGVSERFD--------TLQSDWFSSV----------------------- 161
           AL +A+ N   N    R D         ++ D  S +                       
Sbjct: 200 ALRLARDNLKHNIKLGRLDERAREEVSFVRGDVLSELGAGDNLHLASNAVWRGGKLAHFT 259

Query: 162 --------------------------EGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPR 193
                                          +++SNPPYI             VR F+P+
Sbjct: 260 TAAGGNFSSSSSSNISTPTSTSPETDTNTITILLSNPPYISPAQFTNGTTTRSVRKFEPK 319

Query: 194 ISLD 197
           ++L 
Sbjct: 320 LALV 323


>gi|312212448|emb|CBX92531.1| similar to modification methylase [Leptosphaeria maculans]
          Length = 340

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 16/175 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            + +     S+D+    P+T L V   L  +L  + +     I+D+  G+GA  + L ++
Sbjct: 115 YYIHSAFPASADSVFFGPDTYLFV-PFLGSALRHLSQ-PPTSIIDVCCGSGAGAIHLARQ 172

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPP 173
            P  + +G+D++  ALE+   NA         D +QS+ F +V         D+IVSNPP
Sbjct: 173 YPQAQVLGLDLNPCALELGAVNAQL--ADVNVDFMQSNLFHAVPHALTSNGIDLIVSNPP 230

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           YI S              P  +  G   GL     I     + L+  G+  V  G
Sbjct: 231 YIASSENGQDL-------PIYADGGAGHGLDLSIRIIHEGIKILSSRGVIIVYTG 278


>gi|153802010|ref|ZP_01956596.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122469|gb|EAY41212.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 240

 Score = 99.8 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADI 102

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|197121242|ref|YP_002133193.1| methyltransferase small [Anaeromyxobacter sp. K]
 gi|196171091|gb|ACG72064.1| methyltransferase small [Anaeromyxobacter sp. K]
          Length = 382

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 28/197 (14%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      + P R E   LV SA A         D  R  D+GTGTG + + L +   
Sbjct: 173 GARVHPFHGVYAPIRGEYVDLVASAAAE-----RPLDGQRAFDVGTGTGVLAMVLARA-- 225

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D+  +A+  A+ NA   G++ + + +++D F   EGL DV+V NPP+I     
Sbjct: 226 GARVIATDLEPRAVACARENAARLGLAGQVEVVEADLFP--EGLADVVVCNPPWIPGPAH 283

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-------IGYNQKV 233
             L   V  +DP         G +    +  G+  HL   G   +        +G     
Sbjct: 284 GPLERAV--YDP---------GGAFLERLVRGLPAHLAPGGEAWIVLSDLAERLGLRPPG 332

Query: 234 DVVRIFESRKLFLVNAF 250
           +V R+  +  L +V+  
Sbjct: 333 EVERLARAAGLEVVDVR 349


>gi|229009610|ref|ZP_04166836.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
 gi|229131108|ref|ZP_04260020.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
 gi|228652321|gb|EEL08246.1| hypothetical protein bcere0014_860 [Bacillus cereus BDRD-ST196]
 gi|228751632|gb|EEM01432.1| hypothetical protein bmyco0001_860 [Bacillus mycoides DSM 2048]
          Length = 213

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E    LQS  + +V+G + VI+SNPP                        
Sbjct: 113 KENAANNRI-ENIRILQSSVYENVDGKYAVILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSAMKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|116493224|ref|YP_804959.1| 16S RNA G1207 methylase RsmC [Pediococcus pentosaceus ATCC 25745]
 gi|116103374|gb|ABJ68517.1| 16S rRNA m(2)G 1207 methyltransferase [Pediococcus pentosaceus ATCC
           25745]
          Length = 201

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 72/194 (37%), Gaps = 34/194 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKES 119
           + +        F     ++  +D      L  I+      +ILD+G G G + ++L K  
Sbjct: 26  HKLNFISDRGVF-----SKNTIDFGTRTLLEAIQIVGSAEKILDVGCGYGPIGISLAKSF 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  +    D++ +AL +AK NAV N V ++    +SD + +++   F  I+SNPP     
Sbjct: 81  PEIQVQMTDVNERALGLAKRNAVANSVEKQTQIYKSDAYENIDDTDFTTIISNPP----- 135

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                   VR             G S   TI      HL   G   + +   Q      +
Sbjct: 136 --------VRA------------GKSVVETIIVEAKSHLKAGGQLVIVLQKKQGAPSAKK 175

Query: 238 IFESRKLFLVNAFK 251
           + +      V   K
Sbjct: 176 LMQET-FGNVEVLK 188


>gi|332796421|ref|YP_004457921.1| methyltransferase small domain-containing protein [Acidianus
           hospitalis W1]
 gi|332694156|gb|AEE93623.1| methyltransferase small domain protein [Acidianus hospitalis W1]
          Length = 184

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 31/198 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+FY V   +            L     +D      L  +       ++DLG G G + +
Sbjct: 2   REFYIVNDVIDGIPLSLVSHPGLFSKKKIDLGTRTFLENLIIPQQGTVVDLGCGYGVIGI 61

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +  ++   K   +D++  A+  AK N     +  R   ++SD  S+++   D I SNPP
Sbjct: 62  FIALKNENLKVYMLDVNPLAIATAKMNVERYNLQNRVVVMKSDVLSALQEKVDAIYSNPP 121

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G+   +  A+  +  L K G   + + Y  + 
Sbjct: 122 L-------------------------SKGVDFLQKFAEQSAEKLKKGGFIQMVV-YKGEN 155

Query: 234 DVVRIFESRKLFLVNAFK 251
           +V++IF +     +   K
Sbjct: 156 NVLKIFSNY-FSDIKVIK 172


>gi|163938109|ref|YP_001642993.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
 gi|163860306|gb|ABY41365.1| methyltransferase small [Bacillus weihenstephanensis KBAB4]
          Length = 199

 Score = 99.4 bits (247), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E    LQS  + +V+G + VI+SNPP                        
Sbjct: 99  KENAANNRI-ENIRILQSSVYENVDGKYAVILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSAMKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|306829680|ref|ZP_07462870.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
 gi|304428766|gb|EFM31856.1| methyltransferase domain protein [Streptococcus mitis ATCC 6249]
          Length = 196

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GAQATMVDINNRALDLAQQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLKDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSARNKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|229015503|ref|ZP_04172501.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
 gi|229021712|ref|ZP_04178294.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
 gi|228739580|gb|EEL89994.1| hypothetical protein bcere0029_910 [Bacillus cereus AH1272]
 gi|228745790|gb|EEL95794.1| hypothetical protein bcere0030_990 [Bacillus cereus AH1273]
          Length = 213

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 43/205 (20%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKE 118
             TL    F    +  +     VD      +   +  D+   ILD+G G G + L+L KE
Sbjct: 34  EFTLRESRFTFLSDHGVFSKNEVDFGSRLLIEAFQMPDIKGDILDVGCGYGPIGLSLAKE 93

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +AL +AK NA  N + E     QS  + +V+G +  I+SNPP     
Sbjct: 94  FQGREVHMVDVNERALGLAKENAANNRI-ENIRIFQSSVYENVDGKYAAILSNPPIRA-- 150

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I +    +L   G   + I   Q     + 
Sbjct: 151 -----------------------GKDVVHEILEKAVEYLVSGGELWIVIQKKQGAPSALK 187

Query: 237 RI----------FESRKLFLVNAFK 251
           ++           + +  +++ + K
Sbjct: 188 KLEEVFSEVEVVEKKKGYYIIKSKK 212


>gi|239608921|gb|EEQ85908.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
          Length = 495

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 79/245 (32%), Gaps = 82/245 (33%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE----LLVDSALAFSL 90
           +  L   + +  +   +  ILG + F  + +        PRPETE     + +  L+   
Sbjct: 80  KLRLRRMVQQRARGVPLQYILGDQPFGELEILCRRGVLIPRPETEAYTTCVANLLLSKFA 139

Query: 91  P--------------RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCK 132
           P              R +    +RILDL TGTG + L L        P  +  GVDIS +
Sbjct: 140 PAKRKHKHEHEHEHDRFKHLPNLRILDLCTGTGCIPLLLHSLLSPVFPKLQIRGVDISPR 199

Query: 133 ALEIAKSNAVTNGVSERFD--------TLQSDWFSSV----------------------- 161
           AL +A+ N   N    R D         ++ D  S +                       
Sbjct: 200 ALRLARDNLKHNIKLGRLDERAREEVSFVRGDVLSELGAGDNLHLASNAVWRGGKLAHFT 259

Query: 162 ---------------------------EGLFDVIVSNPPYIESVIV--DCLGLEVRDFDP 192
                                           +++SNPPYI             VR F+P
Sbjct: 260 TAAGGNFSSSSSSSNISTPTSTSPETDTNTITILLSNPPYISPAQFTNGTTTRSVRKFEP 319

Query: 193 RISLD 197
           +++L 
Sbjct: 320 KLALV 324


>gi|261403492|ref|YP_003247716.1| methyltransferase small [Methanocaldococcus vulcanius M7]
 gi|261370485|gb|ACX73234.1| methyltransferase small [Methanocaldococcus vulcanius M7]
          Length = 196

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 40/193 (20%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++    S  F        T++LV++ +      ++K D   ILDLG G G + +AL  E 
Sbjct: 26  LKFKTDSGVFSYGKVDKGTKILVENVV------VDKDDD--ILDLGCGYGVIGIALADEV 77

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   DI+ +A+++AK N   N +       + SD + +V+   +D I++NPP    
Sbjct: 78  K--SVTMADINRRAIKLAKENIKLNNLENYDIRVVHSDLYENVKDRKYDKIITNPPIRA- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G      I +     L   G   V I   Q    + 
Sbjct: 135 ------------------------GKEVLHRIIEEGKELLKDGGEIWVVIQTKQGAKSLA 170

Query: 238 IFESRKLFLVNAF 250
            F       V   
Sbjct: 171 KFMEDVFGNVETV 183


>gi|153003698|ref|YP_001378023.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
 gi|152027271|gb|ABS25039.1| methyltransferase small [Anaeromyxobacter sp. Fw109-5]
          Length = 414

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 26/191 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             RL      + P R E   LV SA A            R++++GTGTG + L L +   
Sbjct: 202 GARLHPHYGVYAPVRGEYVDLVASAAAEW-----PVAGKRVIEVGTGTGVLALVLARA-- 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D+   A+  A+ NA   G++ER + +++D F    G  D++VSNPP++     
Sbjct: 255 GARVIATDVEPAAVACARENAARLGLAERVEVVRADLFPDGVGPADLVVSNPPWLPGEAA 314

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-------GYNQKV 233
             L   V  +DP         G      +   +   L   G   + +       G     
Sbjct: 315 SPLERAV--YDP---------GGRFLERLVSALPSRLAPAGEAWIVVSDLAERLGLRPAG 363

Query: 234 DVVRIFESRKL 244
            V  +     L
Sbjct: 364 AVEALAARAGL 374


>gi|229525314|ref|ZP_04414719.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426]
 gi|229338895|gb|EEO03912.1| predicted O-methyltransferase [Vibrio cholerae bv. albensis VL426]
          Length = 240

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECKHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSERFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|170751295|ref|YP_001757555.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
 gi|170657817|gb|ACB26872.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
          Length = 324

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +D     P+T     + +A    R   R V R +D+G G+GA  + + K +P  + V VD
Sbjct: 115 ADAVFFGPDTMRFAAAVIAHLEGR--SRPVRRAVDIGCGSGAAGICVAKRAPGAEVVLVD 172

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           I+  A+  A+ NA   G     D  +SD    VEG FD+IVSNPP++    +D      R
Sbjct: 173 INPAAMRAARVNARLAGTDG-VDVRRSDMLRDVEGQFDLIVSNPPFM----IDTAERAYR 227

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                    GG  G      +A+  +  L   G   +  G
Sbjct: 228 H-------GGGPLGAGLSLAVAEQAAGRLAPGGSLVLFTG 260


>gi|145630697|ref|ZP_01786476.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
 gi|144983823|gb|EDJ91273.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
          Length = 330

 Score = 99.4 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHSTLQDLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSTIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K +P  +    DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+ +
Sbjct: 210 KRAPNAQITMTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPFHD 267

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            + +      HL++ G  
Sbjct: 268 GIDTAYRT---------------------VKELITQAKWHLDQGGEL 293


>gi|89889428|ref|ZP_01200939.1| methyltransferase [Flavobacteria bacterium BBFL7]
 gi|89517701|gb|EAS20357.1| methyltransferase [Flavobacteria bacterium BBFL7]
          Length = 240

 Score = 99.0 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 8/155 (5%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + ++   ILD+GTGTG + L L +     +   +++   A E A +N      S+R    
Sbjct: 33  QDKNPYSILDIGTGTGVISLMLAQRFHSAQIEAIELDEDAYEQAANNFENAAWSDRMFCF 92

Query: 154 QS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +   ++F  VE  +D+I+SNPP+ +S  +       R+ +   +     D L     + 
Sbjct: 93  HASFQEFFEEVEDTYDLIISNPPFFDSSSIKNDSSIERNRE--QARF--DDALPF-EELL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            GV + L+ DG+ S  I Y+++   ++I    KLF
Sbjct: 148 YGVYKLLDDDGIFSCIIPYDRENHFLKIAAHYKLF 182


>gi|315649712|ref|ZP_07902796.1| methyltransferase small [Paenibacillus vortex V453]
 gi|315274900|gb|EFU38276.1| methyltransferase small [Paenibacillus vortex V453]
          Length = 201

 Score = 99.0 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 65/173 (37%), Gaps = 28/173 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      +  +E +    +LD+G G G + L   K         +DI+ +A+E+AK NA
Sbjct: 43  VDFGSKVLIDAMEFQQNASVLDVGCGYGPIGLTAAKMVVDGHVTMIDINSRAVELAKENA 102

Query: 142 VTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             NG+S     L+SD F+ V +  FDVI++NPP                           
Sbjct: 103 RRNGIS-NVTILESDLFAVVKDQQFDVILTNPPIRA------------------------ 137

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFKD 252
            G      I +    HL + G   V I   Q         ES    +    KD
Sbjct: 138 -GKETVHAIFEESLSHLREGGQLWVVIQKKQGAPSAKAKLESLFHQVEEVTKD 189


>gi|229053947|ref|ZP_04195381.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
 gi|228721365|gb|EEL72886.1| hypothetical protein bcere0026_870 [Bacillus cereus AH603]
          Length = 199

 Score = 99.0 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIYMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N + E    LQS  + +V+G + VI+SNPP                        
Sbjct: 99  KENAANNRI-ENIRILQSSVYENVDGKYAVILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 137 ----GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSAMKKLEEVFSEVEVVEKKKGYY 192

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 193 IIKSKK 198


>gi|157147620|ref|YP_001454940.1| 16S ribosomal RNA m2G1207 methyltransferase [Citrobacter koseri
           ATCC BAA-895]
 gi|226712936|sp|A8ALZ1|RSMC_CITK8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157084825|gb|ABV14503.1| hypothetical protein CKO_03420 [Citrobacter koseri ATCC BAA-895]
          Length = 342

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +    +  G     ++ +      F
Sbjct: 117 GVRSAEQMLADYAPLNKIDSARRCGLYHGRLEKQPVFDAEKYWGEYRINDLTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G +  AL   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEG--EVFASNVFSDVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGIQTSLDAAQTLIHGAVRHLNSGGEL 299


>gi|294673578|ref|YP_003574194.1| hypothetical protein PRU_0841 [Prevotella ruminicola 23]
 gi|294471995|gb|ADE81384.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 236

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 14/153 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG V L + +  P  +  G+DI   A + A+ N V +  S+R    + D  +
Sbjct: 41  RILDIGTGTGLVALMMAQRFPEAQVTGIDIDEDAAQQAQENVVGSPFSDRIMINRED-AT 99

Query: 160 SVEGL--FDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            ++    +D IV NPPY ++S+        +      +SL         Y ++    S+ 
Sbjct: 100 KIDDKAGYDAIVCNPPYFVDSLTCPQDQRTLARH--AVSLT--------YESLMHAASKL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           L  +G+ S+ I  + + +V        LFL   
Sbjct: 150 LKPNGILSLVIPADNQDNVESAAAFEGLFLTRI 182


>gi|104782146|ref|YP_608644.1| DNA methylase [Pseudomonas entomophila L48]
 gi|95111133|emb|CAK15853.1| putative DNA methylase [Pseudomonas entomophila L48]
          Length = 317

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 14/161 (8%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S D     P++   V  A+   L       +   +D+G GTG   L++ + +P  +   V
Sbjct: 110 SHDAVFFGPDSYRFV-RAIHGHLQHCP-HPLRHAVDIGCGTGVGALSIARAAPQAQVTAV 167

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+  AL     NA   GV+       SD  + V G FD+IV+NPPY+    +D      
Sbjct: 168 DINPLALRYTAVNAALAGVA-NVSPQASDLLNGVSGHFDLIVANPPYM----LDASERVY 222

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           R         GG  G      I +     L   G   +  G
Sbjct: 223 RH-------GGGRLGAGLSLRIVEQACERLVPGGTLLLYTG 256


>gi|315613342|ref|ZP_07888251.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
           49296]
 gi|315314577|gb|EFU62620.1| methyltransferase domain protein [Streptococcus sanguinis ATCC
           49296]
          Length = 196

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N +       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINNRALDLARQNAERNKIEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLNDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSARNKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|116787734|gb|ABK24622.1| unknown [Picea sitchensis]
 gi|224286210|gb|ACN40814.1| unknown [Picea sitchensis]
          Length = 277

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 11/164 (6%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK---ESPFFK 123
             S+ +EP  ++  LVD+ LA     +E+      L+LG G+G V  +L     E    +
Sbjct: 47  CHSEVYEPCDDSFALVDALLAD-RVHLEEVQPSLCLELGCGSGYVITSLALMLGEGTGIQ 105

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A+E+ K     +GV        L S     + G  DV+V NPPY+ +    
Sbjct: 106 YLATDINSAAIEVTKKTLEAHGVHAEVILTDLVSGLDKRLAGTVDVLVVNPPYVPTSE-- 163

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               EV       +  GG  G +    I   V   L+  G   +
Sbjct: 164 ---EEVGGDGIAAAWAGGEHGRTVIDRILAIVDNLLSSKGWFYL 204


>gi|116753598|ref|YP_842716.1| putative methylase [Methanosaeta thermophila PT]
 gi|116665049|gb|ABK14076.1| putative methylase [Methanosaeta thermophila PT]
          Length = 185

 Score = 99.0 bits (246), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 18/176 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D + P  +T LL+ +A++      E      ++++G G+G +  +L+        +  DI
Sbjct: 3   DVYPPSEDTYLLMRAAIS------EASAGDSVIEIGCGSGVISASLI--GKVRSILATDI 54

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +  A+  A     + G+      +++D F  +   FD+I+ NPPY+ +     L  E   
Sbjct: 55  NPHAVRAA----ASLGIP----AVRADLFHGINSKFDLILFNPPYLPTEDGLDLNPEDDR 106

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKL 244
           +    +LDGG DG         GV   ++  G   + I       +V  +      
Sbjct: 107 WL-STALDGGADGREVIERFLKGVKNIMSPRGRLLLLISSLTGLDEVQELARRSGF 161


>gi|86157207|ref|YP_463992.1| methyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773718|gb|ABC80555.1| Methyltransferase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 382

 Score = 99.0 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 17/160 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD   A +  R       R  D+GTGTG + L L +     + +
Sbjct: 175 RVHPFHGVYAPIRGEYVDLVAAAAAER--PLHGKRAFDVGTGTGVLALVLARA--GARVI 230

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +A+  A+ NA   G++ + + +++D F   EG+ DVIV NPP+I +     L  
Sbjct: 231 ATDLEPRAVACARENAARLGLAGQVEVVEADLFP--EGVADVIVCNPPWIPAPAHGPLER 288

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  +DP         G +    +  G+  HL   G   +
Sbjct: 289 AV--YDP---------GGAFLERLLRGLPAHLAPGGEAWI 317


>gi|301097822|ref|XP_002898005.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262106450|gb|EEY64502.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 200

 Score = 98.6 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 16/191 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KE 118
           + +    D +EP  +T L VD AL   LP++   +    +++G G+GAV + L     K 
Sbjct: 7   IDMAYDCDVYEPAEDTYLFVD-ALQDELPQLVALNPAICVEIGCGSGAVFVYLATQLQKM 65

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPY 174
                 +  DI+  A  +A+  A  NG +E FD +++D        ++G  DV++ NPPY
Sbjct: 66  GTRAMFLATDINPLAAGVAQQTAKNNG-AEAFDVVRTDLLQCYEPRIQGHVDVLLFNPPY 124

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKV 233
           + +        EV       +  GG+ G      +   ++  L+  G+  +  +  N+  
Sbjct: 125 VPTP-----SEEVGSTGIEAAWAGGLHGREVIDRLLPKINDLLSPQGVFYMVVVVENKPK 179

Query: 234 DVVRIFESRKL 244
           ++  I      
Sbjct: 180 EIAAILAKDGF 190


>gi|169605047|ref|XP_001795944.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15]
 gi|111065483|gb|EAT86603.1| hypothetical protein SNOG_05539 [Phaeosphaeria nodorum SN15]
          Length = 301

 Score = 98.6 bits (245), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 22/184 (11%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            ++ I       +     SSD     P+T L +      ++     +    ++D+  G+G
Sbjct: 73  PLYYI-------HSSFPASSDAVFFGPDTYLFI--GFLQTISEHMLQSPNCVVDVCCGSG 123

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF---- 165
           A  + + +  P  + +G+D++ +AL +   NA   G        +SD +++V        
Sbjct: 124 AGAIHMARTYPHAEVIGLDLNPRALSLGGVNARLAGTE--VTFHESDLYAAVPETLKSSG 181

Query: 166 -DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D+IVSNPPYI S   +   L      P  +  G   GL     I +   + L  +G+  
Sbjct: 182 IDLIVSNPPYIASCPKNEEDL------PIYADGGAEFGLDISLRIVEEGMKILASNGMII 235

Query: 225 VEIG 228
           V  G
Sbjct: 236 VYTG 239


>gi|160888233|ref|ZP_02069236.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492]
 gi|156862179|gb|EDO55610.1| hypothetical protein BACUNI_00642 [Bacteroides uniformis ATCC 8492]
          Length = 235

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 14/175 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + +P  +   ++I   A   A  N   +  ++R +
Sbjct: 32  WAPADKAKRILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVE 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +  D+     E  FD+IVSNPPY    +      E R      +   G     +Y  + 
Sbjct: 92  VICHDFRDYQPENRFDLIVSNPPYFIDALK--CPDEQRC----TARHAGN---LNYDLLF 142

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG--GND--RVLL 261
              +  L + G+ S+ I    +  VV    + KLF ++  + +   G    RVLL
Sbjct: 143 HRSASLLEEQGVVSIIIPAEAEKTVVDTAWNHKLFPLHRVQVFTKPGKPCRRVLL 197


>gi|270296757|ref|ZP_06202956.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317480115|ref|ZP_07939225.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
 gi|270272744|gb|EFA18607.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316903662|gb|EFV25506.1| methyltransferase domain-containing protein [Bacteroides sp.
           4_1_36]
          Length = 235

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 14/175 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + +P  +   ++I   A   A  N   +  ++R +
Sbjct: 32  WAPADKAKRILDVGTGTGLIALQLAQRNPHARITAIEIDAAAAGQATENVSHSPWADRVE 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +  D+     E  FD+IVSNPPY    +      E R      +   G     +Y  + 
Sbjct: 92  IICHDFRDYQPENRFDLIVSNPPYFIDALK--CPDEQRC----TARHAGN---LNYDLLF 142

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG--GND--RVLL 261
              +  L + G+ S+ I    +  VV    + KLF ++  + +   G    RVLL
Sbjct: 143 RRSASLLEEQGVVSIIIPAEAEKTVVDTAWNHKLFPLHRVQVFTKPGKPCRRVLL 197


>gi|54024505|ref|YP_118747.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
 gi|54016013|dbj|BAD57383.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
          Length = 385

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 16/162 (9%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     +D      LP     D   + D+GTGTG +  A+L +       
Sbjct: 173 RIHPAYGVFAPTRGEYIDLVARSPLP--PGVDHPVVFDIGTGTGVLA-AVLAQRGAADVR 229

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D++ +A+  A+SN    G+ +R    ++D + +V    D+IV NPP++       L L
Sbjct: 230 ATDLNPRAVRCARSNLRRLGLDDRVHVAEADLWPAVPAHADLIVCNPPWLPGHPTSALEL 289

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
            V  +DP         G +       G++ HL     G   +
Sbjct: 290 GV--YDP---------GSAVLDRFLTGLADHLTPQGEGWLIL 320


>gi|307731153|ref|YP_003908377.1| methyltransferase small [Burkholderia sp. CCGE1003]
 gi|307585688|gb|ADN59086.1| methyltransferase small [Burkholderia sp. CCGE1003]
          Length = 375

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 61/238 (25%), Positives = 90/238 (37%), Gaps = 38/238 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV+  R+   L  A     K   I   LG R        +        P     VD    
Sbjct: 140 SVVSLRELLGLIGAHEWRKKGVEIPA-LGER--------IHPHYGVFSPVRGEYVDLVAR 190

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             LP + K       D+GTGTG +  ALL +    K V  D   +AL  A+ N    G  
Sbjct: 191 TPLPSLNKA-----FDVGTGTGVLA-ALLAKRGVKKIVATDQDPRALACARENLARLGYG 244

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ++ D +Q+D F   EG   ++V NPP++ +     +   V D D R+ L G ++GL    
Sbjct: 245 QQVDVVQADLFP--EGRAPLVVCNPPWVPARPASPIEHAVFDPDSRM-LLGFLNGL---- 297

Query: 208 TIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                 + HL+    G   +    E  G   +  ++   E   L  V   +D     R
Sbjct: 298 ------ADHLSPGGEGWLILSDFAEHLGLRTREWLLAAIEKAGLT-VAGREDI--RPR 346


>gi|297580787|ref|ZP_06942713.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535203|gb|EFH74038.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 240

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQEAEHNRQQSPWAERIECQHADI 102

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      ++      L H + + + + + 
Sbjct: 103 LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------AMARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALAKQAGLF 182


>gi|255647950|gb|ACU24432.1| unknown [Glycine max]
          Length = 234

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 28/208 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA     +E    +  +++G G+G    ++ L L +E     
Sbjct: 19  HQEVYEPCDDSFALVDALLADRNNLLEHHPTL-CMEIGCGSGYVITSLALILGQEVCGIN 77

Query: 124 GVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A+ +       +GV        + S     + GL DV+V NPPY+ +    
Sbjct: 78  YIATDINPHAVRVTHETLEAHGVGAELIVTDIASGLEDRLAGLVDVMVVNPPYVPTPE-- 135

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS---------VEI----- 227
               EV       S  GG +G S    I     R L++ G             EI     
Sbjct: 136 ---DEVGVEGITSSWAGGENGRSVINKILPVADRLLSEKGWLYMVTLTENNPFEICHQMR 192

Query: 228 --GYNQKVDVVRIFESRKLFLVNAFKDY 253
             GY  K+ V R  E   L ++  ++D+
Sbjct: 193 KKGYASKIVVQRSTEEESLHIIKFWRDF 220


>gi|15640681|ref|NP_230310.1| hypothetical protein VC0661 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587873|ref|ZP_01677630.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153818696|ref|ZP_01971363.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822285|ref|ZP_01974952.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080842|ref|YP_002809393.1| hypothetical protein VCM66_0619 [Vibrio cholerae M66-2]
 gi|229508709|ref|ZP_04398202.1| predicted O-methyltransferase [Vibrio cholerae B33]
 gi|229519542|ref|ZP_04408985.1| predicted O-methyltransferase [Vibrio cholerae RC9]
 gi|229608736|ref|YP_002879384.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236]
 gi|254850992|ref|ZP_05240342.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255743879|ref|ZP_05417835.1| predicted O-methyltransferase [Vibrio cholera CIRS 101]
 gi|262156098|ref|ZP_06029217.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1]
 gi|298500777|ref|ZP_07010580.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|81858152|sp|Q9KU62|TRMN6_VIBCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828776|sp|C3LSR6|TRMN6_VIBCM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|9655099|gb|AAF93827.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547909|gb|EAX57993.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126510776|gb|EAZ73370.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520181|gb|EAZ77404.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227008730|gb|ACP04942.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229344231|gb|EEO09206.1| predicted O-methyltransferase [Vibrio cholerae RC9]
 gi|229354233|gb|EEO19163.1| predicted O-methyltransferase [Vibrio cholerae B33]
 gi|229371391|gb|ACQ61814.1| predicted O-methyltransferase [Vibrio cholerae MJ-1236]
 gi|254846697|gb|EET25111.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738510|gb|EET93899.1| predicted O-methyltransferase [Vibrio cholera CIRS 101]
 gi|262030134|gb|EEY48779.1| predicted O-methyltransferase [Vibrio cholerae INDRE 91/1]
 gi|297540558|gb|EFH76616.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 240

 Score = 98.6 bits (245), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + +     LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALARQAGLF 182


>gi|302909366|ref|XP_003050057.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI
           77-13-4]
 gi|256730994|gb|EEU44344.1| hypothetical protein NECHADRAFT_105314 [Nectria haematococca mpVI
           77-13-4]
          Length = 271

 Score = 98.6 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 47/226 (20%)

Query: 70  DTFEPRPE--TELLVDSALAFSL---PRIEKRDVVRILDLGTGTGAVCL----ALLKESP 120
               P  E  T  LVD   +  L      + R  + ++D  +GTG + L    +L +   
Sbjct: 4   RAIVPETEAYTFHLVDLIKSGELLGKEWKKGRRGLNLIDFCSGTGCIPLGLFSSLWRSVA 63

Query: 121 FFKGVGVDISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSS------VEGLF 165
             +  GVDIS  A ++A  N   N            +     + D FS        +  +
Sbjct: 64  HLRVTGVDISPIASKLANENIARNIRLGNLPQPNEKQNLKIARGDVFSDSDMQQLADTRW 123

Query: 166 DVIVSNPPYIESVIVD----CLGLEVRDFDPRISLDGGIDG-----------LSHYRTIA 210
           DV+VSNPPYI + + +     LGL VR ++PR++L    DG              Y  + 
Sbjct: 124 DVLVSNPPYISNDVWNHGRGQLGLSVRKYEPRLALV--PDGNLPCPAECDPADVFYSRLL 181

Query: 211 DGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESR---KLFLVNAFKD 252
           D V+  L    +  +EIG  NQ   V++++ +    K      ++D
Sbjct: 182 D-VATILKPK-VMLLEIGDENQARRVLQLYFAHSTAKNSRAEIWRD 225


>gi|253583730|ref|ZP_04860928.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           varium ATCC 27725]
 gi|251834302|gb|EES62865.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           varium ATCC 27725]
          Length = 225

 Score = 98.2 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 16/180 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +        K+   +ILD+GTG G + + L+ +       G+DI  + +E+AK N 
Sbjct: 27  VDAVILSDFFAYTKKG--KILDIGTGNGIIPVLLVSKEKGEDITGIDIQEENVELAKRNV 84

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLG---LEVRDFDPRISLD 197
             N +++  + +  D    S+   FD IVSNPPY+E             +   + +++L 
Sbjct: 85  QLNNLNDNIEIVHGDVKEYSMGNSFDYIVSNPPYMEVDGKKQNILSCKSIARHEIKLNLS 144

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
                      +     + L   G  S+     +  D+ RI E     L      Y   +
Sbjct: 145 ----------QLVQSAKKLLKPIGSFSLVHRSYRFTDISRILEDSGFSLKRVRFVYFSKE 194


>gi|302518894|ref|ZP_07271236.1| methyltransferase [Streptomyces sp. SPB78]
 gi|302427789|gb|EFK99604.1| methyltransferase [Streptomyces sp. SPB78]
          Length = 219

 Score = 98.2 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL     A +L          +LDL TG+G   LALL      +    D
Sbjct: 5   PGVYAPQADTHLL-----ARALGTEPIGPHTHVLDLCTGSG--ALALLAARRGARVCATD 57

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A+  A+ NA   G  +R   L+ D    V G  F+     PPY+            
Sbjct: 58  LSWRAVVSARINAARAG--QRVRVLRGDLSGPVRGQRFEPDREQPPYVPDPAARTSPRRD 115

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           R     ++ D G  G      +       L+  G+  +  
Sbjct: 116 RSHAASLAWDAGPGGRHLVDRVCAHAGDVLSPRGVLLLVH 155


>gi|323477798|gb|ADX83036.1| methyltransferase small [Sulfolobus islandicus HVE10/4]
          Length = 186

 Score = 98.2 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 38/182 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I+  +   + D+G G G + + L  ++P  K   VD++  A+++AK NA 
Sbjct: 31  DLGTRVLLENIKLAESGIVADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAK 90

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NGV  R   L+SD F    V+  F+ I SNPP                           
Sbjct: 91  LNGVENRTIILKSDIFDNVPVDVKFNAIYSNPPL-------------------------S 125

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----------ESRKLFLVNAF 250
            G+   + + D     L + G   + + Y  + ++ +IF            +   L+   
Sbjct: 126 KGVDFLKKLEDQSYDRLVEKGFLQL-VAYKGEENIEKIFGKRFKIESIKRKKGYSLITIV 184

Query: 251 KD 252
           KD
Sbjct: 185 KD 186


>gi|227827979|ref|YP_002829759.1| methyltransferase small [Sulfolobus islandicus M.14.25]
 gi|227830702|ref|YP_002832482.1| methyltransferase [Sulfolobus islandicus L.S.2.15]
 gi|229581727|ref|YP_002840126.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51]
 gi|229585246|ref|YP_002843748.1| methyltransferase small [Sulfolobus islandicus M.16.27]
 gi|238620205|ref|YP_002915031.1| methyltransferase small [Sulfolobus islandicus M.16.4]
 gi|284998227|ref|YP_003419994.1| methyltransferase small [Sulfolobus islandicus L.D.8.5]
 gi|227457150|gb|ACP35837.1| methyltransferase small [Sulfolobus islandicus L.S.2.15]
 gi|227459775|gb|ACP38461.1| methyltransferase small [Sulfolobus islandicus M.14.25]
 gi|228012443|gb|ACP48204.1| methyltransferase small [Sulfolobus islandicus Y.N.15.51]
 gi|228020296|gb|ACP55703.1| methyltransferase small [Sulfolobus islandicus M.16.27]
 gi|238381275|gb|ACR42363.1| methyltransferase small [Sulfolobus islandicus M.16.4]
 gi|284446122|gb|ADB87624.1| methyltransferase small [Sulfolobus islandicus L.D.8.5]
          Length = 186

 Score = 98.2 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 38/182 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I+  +   + D+G G G + + L  ++P  K   VD++  A+++AK NA 
Sbjct: 31  DLGTRVLLENIKLAESGIVADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAK 90

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NGV  R   L+SD F    V+  F+ I SNPP                           
Sbjct: 91  LNGVENRTIILKSDIFDNVPVDVKFNAIYSNPPL-------------------------S 125

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----------ESRKLFLVNAF 250
            G+   + + D     L + G   + + Y  + ++ +IF            +   L+   
Sbjct: 126 KGVDFLKKLEDQSYDRLVEKGFLQL-VAYKGEENIEKIFGKRFKIESIKRKKGYSLITIV 184

Query: 251 KD 252
           KD
Sbjct: 185 KD 186


>gi|332637119|ref|ZP_08415982.1| 16S RNA G1207 methylase RsmC [Weissella cibaria KACC 11862]
          Length = 205

 Score = 98.2 bits (244), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 32/183 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKES 119
           +++  T  +  F         VD      L   ++     +ILDLG G G V +AL    
Sbjct: 26  HSLTFTTDAGVFSKST-----VDFGTRTMLEAFDQDIPAGKILDLGAGYGPVSIALATVM 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  + V  +I+ +A E+ K NA  NGVS+R D + SD +S V+G F  I++NPP      
Sbjct: 81  PDREFVAAEINERAAELVKRNAQKNGVSDRIDVVLSDRYSGVDGKFAAILTNPP------ 134

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                  VR             G      +  G   +L   G  +V +   Q       +
Sbjct: 135 -------VRA------------GKEIVSDMIAGAKDYLVDGGTLTVVLQKKQGAPSAKAL 175

Query: 239 FES 241
              
Sbjct: 176 MTE 178


>gi|331266183|ref|YP_004325813.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
 gi|326682855|emb|CBZ00472.1| 16S RNA G1207 methylase RsmC [Streptococcus oralis Uo5]
          Length = 196

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E  +   +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNEGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GAQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLKDRGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|229165089|ref|ZP_04292884.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
 gi|228618352|gb|EEK75382.1| hypothetical protein bcere0007_860 [Bacillus cereus AH621]
          Length = 213

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 45/186 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P ++      +LD+G G G + L+L KE    +   VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDVKGN----VLDVGCGYGPIGLSLAKEFQNREIHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NAV N + E    LQS  + +V+G + VI+SNPP                        
Sbjct: 113 KENAVNNRI-ENIRILQSSVYENVDGKYAVILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI----------FESRKLF 245
               G      I +    +L   G   + I   Q     + ++           + +  +
Sbjct: 151 ----GKDIVHEILEKAVEYLVSGGELWIVIQKKQGAPSAMKKLEEVFSEVEVVEKKKGYY 206

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 207 IIKSKK 212


>gi|327394850|dbj|BAK12272.1| O-methyltransferase YfiC [Pantoea ananatis AJ13355]
          Length = 311

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +P       V++   A + A  N   +  + R 
Sbjct: 104 WAPVAGVKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARM 163

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D   W  + E  + +IVSNPPY +  +        RD            G   ++
Sbjct: 164 QVHQQDIAQWAENCEARYSLIVSNPPYFDPGVACATP--ARDS-------ARATGSLDHQ 214

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLLF 262
           T+    +  + ++G   V +       V+ + ++    L     D   Y      RVLL 
Sbjct: 215 TLLRCAAALIEEEGFFCVVLPEATGQQVIALAQADGWHL-RFRFDVAEYAHRPPHRVLLG 273


>gi|239825684|ref|YP_002948308.1| methyltransferase small [Geobacillus sp. WCH70]
 gi|239805977|gb|ACS23042.1| methyltransferase small [Geobacillus sp. WCH70]
          Length = 200

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 49/205 (23%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  T  S  F  R     T LL+++         E +     LD+G G G + L++ K  
Sbjct: 28  LTFTTDSGVFSKREVDFGTRLLIETF-------EEPKVDGDFLDVGCGYGPIGLSIAKAF 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
           P      +DI+ +ALE+A  N   N ++      +SD F+ V +  F  I++NPP     
Sbjct: 81  PNRHVDMIDINKRALELANENKHANHIT-NASIYESDLFAQVGDKKFAAILTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV----- 233
                                  G      I +  + HL  +G   V I   Q       
Sbjct: 138 -----------------------GKRVVHAIFEQSAAHLYPNGELWVVIQKKQGAPSALK 174

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  IF       + +  +++ + K
Sbjct: 175 KLQEIFSYVEVVTKKKGYYIIKSKK 199


>gi|170768477|ref|ZP_02902930.1| ribosomal RNA small subunit methyltransferase C [Escherichia
           albertii TW07627]
 gi|170122581|gb|EDS91512.1| ribosomal RNA small subunit methyltransferase C [Escherichia
           albertii TW07627]
          Length = 343

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D+     L  +      ++LD+G GTG + +A  + SP 
Sbjct: 166 GLTIKTLPGVFS-RDG----LDAGSQLLLSTLTPHTKGKVLDIGCGTGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++  V NG+    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLVANGIEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|300786180|ref|YP_003766471.1| methyltransferase [Amycolatopsis mediterranei U32]
 gi|299795694|gb|ADJ46069.1| methyltransferase [Amycolatopsis mediterranei U32]
          Length = 239

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 17/184 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL  +    ++P        R LDL TGTGA  + L +       + VD
Sbjct: 33  PGVYRPQEDTALLASAIAELAIPA-----GARALDLCTGTGAQAITLARRGAG-TVLAVD 86

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +AL  A+ NA+   ++ R    +     ++ EG FDV+V+NPPY+ S         V
Sbjct: 87  LSRRALASARLNALVRQLAVR--PCRGGLARALREGPFDVVVANPPYVPSP-----APTV 139

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R        D G DG +    +       L   G   +       VD  R   + +   V
Sbjct: 140 RS---TRGWDAGPDGRALLDPLCAAAGTLLRPGGTMLLVHSTLSDVDKSREMLAARGLRV 196

Query: 248 NAFK 251
           +  +
Sbjct: 197 SVVR 200


>gi|126179900|ref|YP_001047865.1| putative methylase [Methanoculleus marisnigri JR1]
 gi|125862694|gb|ABN57883.1| putative methylase [Methanoculleus marisnigri JR1]
          Length = 188

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 22/175 (12%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P  ++ LL+ +ALA      E R   R+L++GTG+G V   L+  +     V  +I+
Sbjct: 6   VYPPAEDSFLLLRAALA------EVRATDRVLEVGTGSGYVAAGLIGRA--ASVVATEIN 57

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             A   A+        +   + +++D F  V G FD+I+ NPPY+ +   + +   +   
Sbjct: 58  PHAARCAR--------ARGVEAVRTDLFLGVSGPFDLILFNPPYLPTAPDERMDDWL--- 106

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL 244
               +LDGG  G            R L   G   + +       +V  +F     
Sbjct: 107 --EYALDGGPTGRVVIERFVADAGRVLAPFGRVLLLVSSLTDLDEVRELFAREGF 159


>gi|281424314|ref|ZP_06255227.1| SmtA protein [Prevotella oris F0302]
 gi|281401583|gb|EFB32414.1| SmtA protein [Prevotella oris F0302]
          Length = 231

 Score = 98.2 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 12/156 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+GTGTG + L L +  P  K   +DI+ +A   AK N   +  + +    Q+
Sbjct: 34  RGGNRVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQT 93

Query: 156 DW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               F S E  FD IVSNPP+  + + +      R      +          YR +  GV
Sbjct: 94  SLQEFESAE-RFDCIVSNPPFFVNSLPN--PDAARSMARHTAT-------LPYRVLFAGV 143

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            R L   G  S  I  + +   V         L   
Sbjct: 144 KRLLTPLGCFSAIIPADCQSQFVAEATLTGFSLSRV 179


>gi|291618454|ref|YP_003521196.1| YfiC [Pantoea ananatis LMG 20103]
 gi|291153484|gb|ADD78068.1| YfiC [Pantoea ananatis LMG 20103]
          Length = 311

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +P       V++   A + A  N   +  + R 
Sbjct: 104 WAPVAGVKRILDIGTGSGLIALMLAQRTPSNVDVDAVELDPDAAQQAHENIQQSPWAARM 163

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D   W  + E  + +IVSNPPY +  +        RD            G   ++
Sbjct: 164 QVHQQDIAQWAENCEARYSLIVSNPPYFDPGVACATP--ARDS-------ARATGSLDHQ 214

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLLF 262
           T+    +  + ++G   V +       V+ + ++    L     D   Y      RVLL 
Sbjct: 215 TLLRCAAALIEEEGFFCVVLPEATGQQVIALAQADGWHL-RFRFDVAEYAHRPPHRVLLG 273


>gi|283788394|ref|YP_003368259.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
           rodentium ICC168]
 gi|282951848|emb|CBG91558.1| ribosomal RNA small subunit methyltransferase C [Citrobacter
           rodentium ICC168]
          Length = 342

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 78/215 (36%), Gaps = 39/215 (18%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ +      +  G      + +      F
Sbjct: 117 GVRSAEQMLAEYAPLNKVDSARRCGLYHGRLEKQPAFDAEKYWGEYQIDGLTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +AL   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVALASHSPKVRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NG+    D   S+ FS V G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGIEG--DVFASNVFSEVTGRFDMIISNPPF------------------ 271

Query: 193 RISLDGGIDGL----SHYRTIADGVSRHLNKDGLC 223
                   DGL       +T+  G  RHLN  G  
Sbjct: 272 -------HDGLQTSFDAAQTLIRGAVRHLNSGGEL 299


>gi|331229677|ref|XP_003327504.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309306494|gb|EFP83085.1| S-adenosylmethionine-dependent methyltransferase [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 371

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 63/175 (36%), Gaps = 45/175 (25%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDS------------------ALAFSLPRIEKR 96
           +G   F ++  T+      PRPETE  V                    A   + P +   
Sbjct: 61  VGNVPFGDLTFTIRPPILIPRPETEQWVTELSRTMNSYFQAIRSSRPSADESTSPHLPAP 120

Query: 97  DVVR-----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKA-LEIAKSNAVTNGVSERF 150
              R     +LDLGTG+G +   L         VGVDI   A L+ A             
Sbjct: 121 KQSRPSSFKVLDLGTGSGCISNYLAYHHQDVHAVGVDIDQDANLKQASQ----------- 169

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                    S+ G FD+I+SNPPYI       L   V+ ++  I+L G  D    
Sbjct: 170 ---------SLTG-FDMIISNPPYIPLPDYHHLPQSVKGWESSIALIGDRDSREL 214



 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 20/81 (24%)

Query: 201 DGLSHYRTIADGVSR--HLNKD--------G-------LCSVEIGYNQKVDVVRIFESR- 242
           DGL  YR I   V+    L  D        G           E+G+ Q   V ++     
Sbjct: 289 DGLDFYRQIIQLVATGGLLKPDSSNFHHRSGAAGQRLPKLVFEVGHGQAHSVKKLILQLL 348

Query: 243 --KLFLVNAFKDYGGNDRVLL 261
             ++  V   KD+ G +R LL
Sbjct: 349 PGEITQVLIVKDFAGIERTLL 369


>gi|154494856|ref|ZP_02033861.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC
           43184]
 gi|154085406|gb|EDN84451.1| hypothetical protein PARMER_03900 [Parabacteroides merdae ATCC
           43184]
          Length = 238

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           RILD+GTGTG + L L + S       +DI   A   A+ NA ++  + R +   SD   
Sbjct: 40  RILDIGTGTGLIALMLAQRSKAA-IDAIDIEADACLQAQENAESSLFAGRINVFHSDLVD 98

Query: 158 -FSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +   L+D+IVSNPPY ++S+    L          ++L            +     +
Sbjct: 99  FAQASTHLYDLIVSNPPYFVDSLKCPNLQRNTARHTDTLTL----------EDLLQYSRK 148

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L   G  ++ + Y+QK  +    +++ LFL
Sbjct: 149 LLTPQGRIALILPYDQKDRLTDCIQTQNLFL 179


>gi|149918120|ref|ZP_01906613.1| modification methylase HemK [Plesiocystis pacifica SIR-1]
 gi|149821125|gb|EDM80531.1| modification methylase HemK [Plesiocystis pacifica SIR-1]
          Length = 259

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 69/210 (32%), Gaps = 27/210 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V L L    F     +  L        L  + + + +R+LD+G G+GAV + +      
Sbjct: 53  GVELELHPRVFRAAGASTTL------TLLEALGEPEGLRVLDMGCGSGAVGV-IAALRGA 105

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP--YIESV 178
                 D+S  A+  A++N   +G+ +R +   SD F++  +  FD+IV N P  Y    
Sbjct: 106 ASVHLADLSPDAVANARANVRRHGLEDRCEVRCSDLFAAFSDERFDLIVFNVPFLYAAEN 165

Query: 179 IVDCLGLEVRDFD----PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       +    P  +           R        +L   G+            
Sbjct: 166 EATTALPIPAHLEGRLPPAQAFIDVE--YRLIRAFISQAKTYLAPGGVIRC--------- 214

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               F +  +F         G  R  +  R
Sbjct: 215 TFANFGNHAVFDAIVEA--NGLSRTTVARR 242


>gi|320101338|ref|YP_004176930.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM
           2162]
 gi|319753690|gb|ADV65448.1| 16S rRNA m(2)G 1207 methyltransferase [Desulfurococcus mucosus DSM
           2162]
          Length = 193

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 30/168 (17%)

Query: 63  VRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + LT+   +FE    T L     +D      L  I   +   +LD+G G G + + + + 
Sbjct: 16  IPLTIHGQSFEFLSYTSLFSGSSIDEGTRLLLENIVIPEEGVVLDIGCGYGVIGIVVARL 75

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +P  K    D++  A++ A+ NA  NGV +R   ++ D +  VEGL F+ I SNPP    
Sbjct: 76  NPRLKVYMTDVNPLAVKTARFNARRNGVGDRVVVVEGDGYRPVEGLVFNAIYSNPP---- 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                             L     G+     I  G   HL ++G    
Sbjct: 132 ------------------LAA---GMRVVEEIVLGAKEHLAEEGFAQF 158


>gi|229492339|ref|ZP_04386146.1| putative methylase [Rhodococcus erythropolis SK121]
 gi|229320748|gb|EEN86562.1| putative methylase [Rhodococcus erythropolis SK121]
          Length = 224

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 14/158 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL D+ L   L         R+LDL TGT          +     V VD
Sbjct: 7   PGVYPPQHDTSLLADALLFERLTARS-----RVLDLCTGT-GALAVAASAAGAGHVVAVD 60

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           IS +A   A+ N + NG S   D+ + D   +V G LFD+++SNPPY+ ++  D     +
Sbjct: 61  ISRRACANARLNGILNGTS--IDSRRGDLTEAVHGELFDLVISNPPYVPALADDLPTAGI 118

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  + D G DG +    IA  V   L   G   +
Sbjct: 119 -----ERAWDAGKDGRALIDRIAATVHEVLVPGGTLLL 151


>gi|226364323|ref|YP_002782105.1| hypothetical protein ROP_49130 [Rhodococcus opacus B4]
 gi|226242812|dbj|BAH53160.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 215

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 14/158 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T+LL     A  L         R+LDL  GTGA+ +A    +   +   VD
Sbjct: 6   PGVYRPQHDTQLL-----AGVLAAEPLGPHSRVLDLCAGTGALSVA-AAAAGAGRVTAVD 59

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A    + NA+  G   R   ++ D    V E  FDV+VSNPPY+ + +       V
Sbjct: 60  VSRRAAISIRLNALARG--HRIRVIRGDLTEHVRENRFDVVVSNPPYVPAPV-----DTV 112

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            D  P  + D G +G +    I       L   G+  +
Sbjct: 113 PDRGPARAWDAGKNGRALLDRICCEAPEVLVPGGVLLL 150


>gi|256811406|ref|YP_003128775.1| methyltransferase small [Methanocaldococcus fervens AG86]
 gi|256794606|gb|ACV25275.1| methyltransferase small [Methanocaldococcus fervens AG86]
          Length = 196

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 63/193 (32%), Gaps = 40/193 (20%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++    +  F        T++LV++ +          +   ILDLG G G + +AL  E 
Sbjct: 26  LKFKTDAGVFSHGKVDKGTKILVENVVV--------NEDEDILDLGCGYGVIGIALADEV 77

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                   DI+ +A+++AK N   N +       + SD + +V +  +D I++NPP    
Sbjct: 78  K--SVTMADINRRAIKLAKENIKLNNLENYDIRVVHSDLYENVKDKKYDKIITNPPIRA- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G      I       L   G   V I   Q    + 
Sbjct: 135 ------------------------GKEVLHKIIKEGKEILKDGGEIWVVIQTKQGAKSLA 170

Query: 238 IFESRKLFLVNAF 250
            F       V   
Sbjct: 171 KFMEEVFGNVETV 183


>gi|161504897|ref|YP_001572009.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|226712971|sp|A9MRB9|RSMC_SALAR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|160866244|gb|ABX22867.1| hypothetical protein SARI_03023 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 342

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +  +  + D Y    + +      F
Sbjct: 117 GVRSAEQMLADYAPLNKVDSARRCGLYHGRLEKQPLFSLEPYWDEYSIDGLIIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G +  AL   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAALASHSPKVRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NG+    D   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAVNGLDG--DVFASNVFSEVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+     RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRSAVRHLNSGGEL 299


>gi|219871403|ref|YP_002475778.1| phosphatidylserine synthase [Haemophilus parasuis SH0165]
 gi|262828453|sp|B8F678|TRMN6_HAEPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|219691607|gb|ACL32830.1| phosphatidylserine synthase [Haemophilus parasuis SH0165]
          Length = 235

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +   ILDLGTGTG + + L + +   +   +++   A   A+ NA     + R D L
Sbjct: 32  DPSNARHILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQRCPWNNRIDVL 91

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTI 209
           Q+D  +      FD+IVSNPPY E  +        R+    ++        D L      
Sbjct: 92  QADIMTWKSTKKFDLIVSNPPYFEHSLAS------RNKQRDLARAVTYSHFDWL------ 139

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + L  +G  S  +  +    ++       L+ +  +
Sbjct: 140 -KQSQQWLTPNGRISFILPCDAGKKLLEQSHLLGLYCIEYW 179


>gi|260592206|ref|ZP_05857664.1| methyltransferase [Prevotella veroralis F0319]
 gi|260535840|gb|EEX18457.1| methyltransferase [Prevotella veroralis F0319]
          Length = 237

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 19/164 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +RILD+GTGTG + L + +  P      ++I  KALE A  N  ++   +R   + S
Sbjct: 31  QGGMRILDIGTGTGLIALMMAQRFPQAHIDAIEIDPKALEDAHVNIESSPFHDRIKLIHS 90

Query: 156 DW--------FSSVEGLFDVIVSNPPYIESVIVDCLG-LEVRDFDPRISLDGGIDGLSHY 206
                       +V+ ++D I+SNPPY  + + + L    V      ++L          
Sbjct: 91  SLQYYKPSLFPPNVDNVYDAIISNPPYFINSLKNPLQERTVARH--TVTLTP-------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           + +    SR L  +G+ S+ I  + KV +        L      
Sbjct: 141 KELLQHASRLLKDEGILSLIIPSDNKVIIESEAILCGLSTTKII 184


>gi|329925612|ref|ZP_08280453.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
 gi|328939741|gb|EGG36083.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
          Length = 201

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 28/173 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      +  ++     ++LD+G G G + L   + +       +DI+ +A+E+AK NA
Sbjct: 43  VDYGSKVLIDAMDFGQDAQVLDVGCGYGPIGLTAARMASQGHVTMIDINSRAVELAKENA 102

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             NG+      L+SD F +V+   FDV+++NPP                           
Sbjct: 103 KRNGI-INVTILESDLFEAVKDQLFDVVLTNPPIRA------------------------ 137

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFKD 252
            G      I +   +HL ++G   V I   Q         ES    +    +D
Sbjct: 138 -GKETVHAIFEESWKHLRENGQLWVVIQKKQGAPSAKAKLESLFDQVEEVTRD 189


>gi|270292559|ref|ZP_06198770.1| methyltransferase domain protein [Streptococcus sp. M143]
 gi|270278538|gb|EFA24384.1| methyltransferase domain protein [Streptococcus sp. M143]
          Length = 196

 Score = 97.9 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD    F L  +E  +   +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQFLLKCLEVNEGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLVKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLKDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|299140951|ref|ZP_07034089.1| SmtA protein [Prevotella oris C735]
 gi|298577917|gb|EFI49785.1| SmtA protein [Prevotella oris C735]
          Length = 231

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 61/156 (39%), Gaps = 12/156 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+GTGTG + L L +  P  K   +DI+ +A   AK N   +  + +    Q 
Sbjct: 34  RGGNRVLDIGTGTGVIALMLAQRFPEAKITAIDIAEEACRQAKENVSASPFAHQVQVEQI 93

Query: 156 DW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               F S E  FD IVSNPP+  + + +      R      +          YR +  GV
Sbjct: 94  SLQEFESAE-RFDCIVSNPPFFVNSLPN--PDAARSIARHTAT-------LPYRVLFAGV 143

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            R L   G  S  I  + +   V         L   
Sbjct: 144 KRLLTPLGCFSAIIPADCQSQFVAEATLTGFSLSRV 179


>gi|226304757|ref|YP_002764715.1| methyltransferase [Rhodococcus erythropolis PR4]
 gi|226183872|dbj|BAH31976.1| putative methyltransferase [Rhodococcus erythropolis PR4]
          Length = 232

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 14/158 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL D+ L   L         R+LDL TGT          +     V VD
Sbjct: 15  PGVYRPQHDTSLLADALLFEHLTARS-----RVLDLCTGT-GALAVAASAAGAGHVVAVD 68

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEV 187
           IS +A   A+ N + NG     D+ + D   +V G LFD+++SNPPY+ ++  D     +
Sbjct: 69  ISRRACANARLNGILNGTL--IDSRRGDLTEAVHGELFDLVISNPPYVPALADDLPTAGI 126

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  + D G DG +    IA  V   L   G   +
Sbjct: 127 -----ERAWDAGKDGRALIDRIAATVHEVLVPGGTLLL 159


>gi|254291901|ref|ZP_04962683.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422187|gb|EDN14152.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 240

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPQAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIVLAKQAGLF 182


>gi|255009352|ref|ZP_05281478.1| hypothetical protein Bfra3_09443 [Bacteroides fragilis 3_1_12]
 gi|313147109|ref|ZP_07809302.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135876|gb|EFR53236.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 237

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 14/158 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +  VRILD+GTGTG V L L + S       ++I   A   A  N   +    R +
Sbjct: 32  WTPVKSSVRILDIGTGTGLVALMLAQRS-TASITALEIDEAAAAQATENINRSPWKNRIE 90

Query: 152 TLQSDW--FSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +Q D+  +SS  G   FD IVSNPPY  + +        +            D L+ Y 
Sbjct: 91  VIQQDFKHYSSKNGISKFDTIVSNPPYFNASLKCSDEQRNK--------ARHNDSLT-YE 141

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            +  GVS  L+++G  ++ I  +    +  +     L+
Sbjct: 142 ELLAGVSGLLSQEGAFTIVIPMDVGEQIKTLAHKYGLY 179


>gi|237723643|ref|ZP_04554124.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437991|gb|EEO48068.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 234

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 17/179 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            ++      ILD+GTGTG + L + +     +   VDI   A+E A+ N   +   +R +
Sbjct: 32  WVDVVSARNILDVGTGTGLISLMMAQRC-NAQIRAVDIDADAVEQARGNVAASPWQDRIE 90

Query: 152 T-LQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             LQ     + E LFDVIVSNPPY    +        +             D L   + +
Sbjct: 91  VELQDICHFTSETLFDVIVSNPPYFTDSLKCPERQRNIARH---------TDLLDFAK-L 140

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYGGND-RVLLFCR 264
           A+  +R L+ +G+ SV I  + K   +       L L +        G    RVLL  +
Sbjct: 141 AESAARLLHSEGVFSVIIPADGKESFLMAATRYGLHLSHQTLIHTKLGTEPRRVLLAFK 199


>gi|229505717|ref|ZP_04395227.1| predicted O-methyltransferase [Vibrio cholerae BX 330286]
 gi|229357940|gb|EEO22857.1| predicted O-methyltransferase [Vibrio cholerae BX 330286]
          Length = 240

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 57/149 (38%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTVSLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + +     LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIALARQAGLF 182


>gi|145636784|ref|ZP_01792450.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|148825706|ref|YP_001290459.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|229846931|ref|ZP_04467037.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|226712955|sp|A5UBC5|RSMC_HAEIE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145270082|gb|EDK10019.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|148715866|gb|ABQ98076.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|229810015|gb|EEP45735.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           7P49H1]
          Length = 330

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSMIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K  P  +    DI   ALE A+     N +  +     SD FS +EG FD+I+SNPP+  
Sbjct: 210 KRVPNAQITMTDIHAMALESARKTLSENQLQGKV--YASDVFSDIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQYGEL 293


>gi|115717795|ref|XP_793443.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115925716|ref|XP_001197429.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 221

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 80/214 (37%), Gaps = 29/214 (13%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF ++        +EP  +T LL+DS L      I+       +++G G+G V  AL K 
Sbjct: 11  DFSHLTSADFEHVYEPAEDTFLLLDS-LQEEASFIQHMKPSVCVEVGCGSGVVITALSKL 69

Query: 119 SPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
                  +  D +  A    K  A  N      + +  D  + +E    G  D+++ NPP
Sbjct: 70  LNQSALCIATDRNPYAALCTKRTAKQNSC--HVEVMNCDLLTPLERRLQGSVDILIFNPP 127

Query: 174 YI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYN 230
           Y+   S  +   G+E        S  GG DG      +   + + L+  G+  +  I  N
Sbjct: 128 YVVTPSEEIKSNGIEA-------SWAGGADGREVTDRLLPLIPKLLSPQGVMYLIAIREN 180

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +  +++    S                 V+L  R
Sbjct: 181 KPKELMSWISSLGFKST-----------VVLARR 203


>gi|255532860|ref|YP_003093232.1| methyltransferase small [Pedobacter heparinus DSM 2366]
 gi|262828558|sp|C6Y2G0|TRMN6_PEDHD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|255345844|gb|ACU05170.1| methyltransferase small [Pedobacter heparinus DSM 2366]
          Length = 234

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +   ILD+GTGTG + L L +  P      V+I  +A   A  NA+    S R   L 
Sbjct: 34  KNEAANILDIGTGTGVIALMLAQRFPNALVDAVEIDEQAALTATKNALNAPFSGRLKVLH 93

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S     +    +D+IVSNPPY           ++++ + R  +    D    +  + + V
Sbjct: 94  SAIEDYLPEKYYDLIVSNPPYF--------VNDLKNPEHRKGVARHTDA-HFFEQLLERV 144

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  L++DG     +   Q  ++V + +   L
Sbjct: 145 AAMLSRDGRFWFILPLKQAQNIVDMAKFYGL 175


>gi|153829160|ref|ZP_01981827.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875349|gb|EDL73484.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 240

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWLPSKGFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIVLAKQAGLF 182


>gi|228995491|ref|ZP_04155159.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17]
 gi|228764220|gb|EEM13099.1| hypothetical protein bmyco0003_950 [Bacillus mycoides Rock3-17]
          Length = 213

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      +LD+G G G + L+L KE        VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGD----VLDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N V E     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNKV-ENVRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLVNAF 250
               G      I +  + HL   G   + I   Q     + ++ E+     V   
Sbjct: 151 ----GKHIVHEILEKAALHLVSGGELWIVIQKKQGAPSALKKLEET--FSEVEVV 199


>gi|229003116|ref|ZP_04160963.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4]
 gi|228758131|gb|EEM07329.1| hypothetical protein bmyco0002_1050 [Bacillus mycoides Rock1-4]
          Length = 199

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      +LD+G G G + L+L KE        VD++ +AL +A
Sbjct: 46  SRLLIE---AFQMPDIKGD----VLDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLA 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N V E     QS  + +V+G +  I+SNPP                        
Sbjct: 99  KENAANNKV-ENVRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 136

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLVNAF 250
               G      I +  + HL   G   + I   Q     + ++ E+     V   
Sbjct: 137 ----GKHIVHEILEKAALHLVSGGELWIVIQKKQGAPSALKKLEET--FSEVEVV 185


>gi|331696189|ref|YP_004332428.1| methylase [Pseudonocardia dioxanivorans CB1190]
 gi|326950878|gb|AEA24575.1| methylase [Pseudonocardia dioxanivorans CB1190]
          Length = 215

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L      ++ + +T LL       +  R        +LDLGTGTGA+ L   +       
Sbjct: 3   LLCPPGVYKAQSDTHLLAGRVAQLAHGR-------HVLDLGTGTGALALTGARAGAQS-V 54

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCL 183
             VD+S + +   + N + +    R    + D +  V G  F +IV+NPPY+ S     L
Sbjct: 55  TAVDLSRRCVATTRLNFLLHRRPVRVH--RGDLYEPVRGRRFGLIVANPPYVPS-ETSVL 111

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               R      S D G  G +    I DG   HL  DG   +  
Sbjct: 112 PRHTRG----RSWDAGPTGRAILDRICDGAPEHLEDDGTLLLVH 151


>gi|227356263|ref|ZP_03840652.1| methyltransferase [Proteus mirabilis ATCC 29906]
 gi|227163727|gb|EEI48643.1| methyltransferase [Proteus mirabilis ATCC 29906]
          Length = 252

 Score = 97.5 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERF 150
                    +LD+GTG+G + L L + +P   +  G+++   A   A+ NA  +  S   
Sbjct: 42  WAPITKAKTVLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQARENAQQSQWSSLI 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D +         +D+IVSNPPY   +V       E   +   ++ +G        
Sbjct: 102 HIYHHDIYQYAQQAPTRYDLIVSNPPYFEPAVACRNQEREQARYTKTLTHEG-------- 153

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGND--RVLLF 262
             + D   + +  +GL  V + Y      + I + +   +V     KD       R+LL 
Sbjct: 154 --LLDNAQQLITDEGLFCVVLPYLIGEQFIEISQRKGWNVVQRVNIKDSADKPYHRILLA 211


>gi|254037381|ref|ZP_04871458.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           1_1_43]
 gi|226840487|gb|EEH72489.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           1_1_43]
 gi|323935213|gb|EGB31573.1| methyltransferase small domain-containing protein [Escherichia coli
           E1520]
          Length = 343

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|121728405|ref|ZP_01681433.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675421|ref|YP_001216155.1| hypothetical protein VC0395_A0192 [Vibrio cholerae O395]
 gi|262169960|ref|ZP_06037650.1| predicted O-methyltransferase [Vibrio cholerae RC27]
 gi|121629339|gb|EAX61771.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146317304|gb|ABQ21843.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227012486|gb|ACP08696.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|262021694|gb|EEY40405.1| predicted O-methyltransferase [Vibrio cholerae RC27]
          Length = 240

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERIPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIVLAKQAGLF 182


>gi|212693330|ref|ZP_03301458.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855]
 gi|237710069|ref|ZP_04540550.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|212664095|gb|EEB24667.1| hypothetical protein BACDOR_02842 [Bacteroides dorei DSM 17855]
 gi|229456162|gb|EEO61883.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 234

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            ++      ILD+GTGTG + L + +     +   VDI   A+E A+ N   +   +R +
Sbjct: 32  WVDVVSARNILDVGTGTGLISLMMAQRC-NAQIRAVDIDADAVEQARGNVAASPWQDRIE 90

Query: 152 T-LQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             LQ     + E LFDVIVSNPPY    +        +             D L     +
Sbjct: 91  VELQDICHFTSETLFDVIVSNPPYFTDSLKCPERQRNIARH---------TDLLDF-DKL 140

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           A+  +R L+ +G+ SV I  + K   +       L L
Sbjct: 141 AESAARLLHSEGVFSVIIPADGKESFLMAATRYGLHL 177


>gi|254172850|ref|ZP_04879524.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp.
           AM4]
 gi|214033006|gb|EEB73834.1| ribosomal RNA small subunit methyltransferase C [Thermococcus sp.
           AM4]
          Length = 195

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 72/206 (34%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL+++ +             R+LDLG G GA+ + +  
Sbjct: 25  YCFKFITASGVFSFGKLDRGTELLIENMVLDM--------NWRVLDLGCGYGAIGI-VAS 75

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  V  D++ +A+ IA+ N   NGV    +      +  V+G  FD I++NPP   
Sbjct: 76  RFVDY-VVMTDVNRRAVSIARKNLKINGVR-NAEVRWGSLYEPVKGEKFDSIITNPPVHA 133

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                                    G    R I     RHLN  GL  + I   Q    +
Sbjct: 134 -------------------------GKEVLREIVINAPRHLNDGGLLQLVIKTKQGAKYI 168

Query: 237 RIFESRKLFLVNA------FKDYGGN 256
           +         V        ++ Y G 
Sbjct: 169 KALMDEHFTEVRELAKGSGYRVYAGI 194


>gi|222099697|ref|YP_002534265.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
           4359]
 gi|221572087|gb|ACM22899.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga neapolitana DSM
           4359]
          Length = 211

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 63/180 (35%), Gaps = 32/180 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    L  ++     ++LDLG G G + + L KE P  +    DI+ +A+E AK NA
Sbjct: 47  IDKATKVLLENMKVH-GKKVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINA 105

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + V    +    + +   EG  FD+IV NPP +                         
Sbjct: 106 KDHNVE--VEVRWGNLYEPWEGMKFDMIVCNPPIVA------------------------ 139

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            G   +  I       L   G   +   +N+    +           V      GG  RV
Sbjct: 140 -GKEVWMEIVRRAPEFLEDGGSLQLVAYHNKGGRRIREYMREI-FGNVEELCKSGGI-RV 196


>gi|116627670|ref|YP_820289.1| hypothetical protein STER_0852 [Streptococcus thermophilus LMD-9]
 gi|116100947|gb|ABJ66093.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus thermophilus
           LMD-9]
 gi|312278193|gb|ADQ62850.1| Methyltransferase small domain protein [Streptococcus thermophilus
           ND03]
          Length = 196

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 33/190 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +  F     ++ +VD      L  ++      +LD+G G G + ++L K    
Sbjct: 27  GFHFYTDAGVF-----SKKMVDYGSQVLLNALDLERGKNLLDVGCGYGPLGISLAK-VQG 80

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   +DI+ +A+++AK NA  NGV       QS+ + +V   FD I+SNPP        
Sbjct: 81  VQSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYENVSEKFDYIISNPPIRA----- 133

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                               G      I +G   HLN+ G  ++ I   Q     ++   
Sbjct: 134 --------------------GKKVVHEIIEGAFDHLNQGGSLTIVIQKKQGAPSAKVKME 173

Query: 242 RKLFLVNAFK 251
                    +
Sbjct: 174 NVFGNAEIIR 183


>gi|215489682|ref|YP_002332113.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215267754|emb|CAS12216.1| 16S rRNA m2G1207 methylase [Escherichia coli O127:H6 str. E2348/69]
          Length = 343

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +    +  G      + +      F
Sbjct: 117 GVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDAEKFWGEYSVDGLTVKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +A  + SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|193070621|ref|ZP_03051559.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E110019]
 gi|192956104|gb|EDV86569.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E110019]
          Length = 343

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +    +  G      + +      F
Sbjct: 117 GVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDAEKFWGEYSVDGLTVKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +A  + SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|121604208|ref|YP_981537.1| methyltransferase small [Polaromonas naphthalenivorans CJ2]
 gi|120593177|gb|ABM36616.1| methyltransferase small [Polaromonas naphthalenivorans CJ2]
          Length = 417

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 58/162 (35%), Gaps = 16/162 (9%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP       V   D+GTGTG +   L   S   + V
Sbjct: 207 RIHPHYGVFSPVRGEYVDLVANAPLPANPGSKFVAF-DIGTGTGVLSAVLALRSEVDQVV 265

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +ALE A+ N     +      +Q+D F   EG   VIV NPP++ +     L  
Sbjct: 266 ATDLDPRALECARENIYRLRLPNPVKVMQADLFP--EGQASVIVCNPPWLPARPGSPLEG 323

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
            V D D R+ L               G+  HL     G   +
Sbjct: 324 AVYDEDSRMLLG-----------FLKGLPAHLAPGGEGWLIL 354


>gi|237801726|ref|ZP_04590187.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024585|gb|EGI04641.1| hypothetical protein POR16_23066 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 314

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 90/229 (39%), Gaps = 34/229 (14%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVR-------SLKHESIHRILGWRDFY 61
           L  V G S  Q+   P+S+L   +   L  A  + R        ++  S+  +L     +
Sbjct: 48  LRDVFGWSR-QI---PESMLPAEEAQGLLEAGVLERSDDGLKSRVRFSSLDDLL---LMH 100

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +   T   D+    P+T     S         +   + R +D+G GTGA  L +    P 
Sbjct: 101 SAFPTSDEDSVFFGPDTYRFAQSINRHLQDTSQV--ISRAVDIGCGTGAGGLLIAVARPD 158

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VDI+ KAL  A++NA   G+ E  +  QSD  S V G FD+IV+NPPY++     
Sbjct: 159 AQVFAVDINPKALHFAQTNAALAGL-ENVECCQSDILSGVTGTFDLIVANPPYMKDAK-- 215

Query: 182 CLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                      R +   G D L       I       L   G   +  G
Sbjct: 216 -----------RRAYRHGGDALGADLSVRIVRESLDRLTPGGSLVLYTG 253


>gi|119718182|ref|YP_925147.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119538843|gb|ABL83460.1| methyltransferase small [Nocardioides sp. JS614]
          Length = 222

 Score = 97.1 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +R++       PRP T    + A       +       +L+L  G G + L L    
Sbjct: 24  FGPLRISFDGRVLRPRPWTAAQSEWAAEI----LADAPPGPVLELCAGAGQIGL-LAVAG 78

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIES 177
                V VD++  A + A++NA   G+++R +  +      +     F +++++PP++  
Sbjct: 79  SDRPLVCVDVNPVACDYARANAQAAGLADRVEVREGSVHEVLGDSERFALVIADPPWVRR 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             V     +     P +++DGG DG++      D    HL +     +++G  ++VD++R
Sbjct: 139 EEVARFPED-----PVLAIDGGADGMALAWLCIDTARPHLPRGASVLLQLGSVEQVDLLR 193


>gi|229520952|ref|ZP_04410374.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80]
 gi|229342185|gb|EEO07181.1| predicted O-methyltransferase [Vibrio cholerae TM 11079-80]
 gi|259156558|gb|ACV96501.1| methyltransferase [Vibrio fluvialis Ind1]
          Length = 240

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A + A+ N   +  +ER +   +D 
Sbjct: 43  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQSAYQAAEHNRQQSPWAERIECQHADI 102

Query: 158 FS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 103 LHWQPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 154 LEPDGVASFILPKAEGEDFIVLAKQAGLF 182


>gi|16132189|ref|NP_418788.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|82779621|ref|YP_405970.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella dysenteriae
           Sd197]
 gi|89111078|ref|AP_004858.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170083756|ref|YP_001733076.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|218561546|ref|YP_002394459.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli S88]
 gi|238903457|ref|YP_002929253.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
 gi|253775000|ref|YP_003037831.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254164296|ref|YP_003047406.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
           str. REL606]
 gi|293417843|ref|ZP_06660465.1| rsmC [Escherichia coli B185]
 gi|309787410|ref|ZP_07682022.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1617]
 gi|312970060|ref|ZP_07784242.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1827-70]
 gi|732118|sp|P39406|RSMC_ECOLI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123560843|sp|Q327M6|RSMC_SHIDS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712938|sp|B7MNC1|RSMC_ECO45 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712944|sp|B1XFI0|RSMC_ECODH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|537211|gb|AAA97267.1| ORF_f343b [Escherichia coli str. K-12 substr. MG1655]
 gi|1790830|gb|AAC77324.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|81243769|gb|ABB64479.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|85677109|dbj|BAE78359.1| 16S RNA m2G1207 methylase [Escherichia coli str. K12 substr. W3110]
 gi|169891591|gb|ACB05298.1| 16S RNA m2G1207 methylase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|218368315|emb|CAR06134.1| 16S RNA m2G1207 methylase [Escherichia coli S88]
 gi|238859733|gb|ACR61731.1| 16S rRNA m2G1207 methylase [Escherichia coli BW2952]
 gi|242379893|emb|CAQ34729.1| 16S rRNA m[2]G1207 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253326044|gb|ACT30646.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253976199|gb|ACT41870.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli B
           str. REL606]
 gi|253980356|gb|ACT46026.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           BL21(DE3)]
 gi|260450819|gb|ACX41241.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1]
 gi|291430561|gb|EFF03559.1| rsmC [Escherichia coli B185]
 gi|308924988|gb|EFP70483.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1617]
 gi|310337558|gb|EFQ02669.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1827-70]
 gi|315138923|dbj|BAJ46082.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli DH1]
 gi|323171382|gb|EFZ57029.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           LT-68]
          Length = 343

 Score = 97.1 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +    +  G      + +      F
Sbjct: 117 GVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDAEKFWGEYSVDGLTVKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +A  + SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|257469306|ref|ZP_05633400.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
 gi|317063553|ref|ZP_07928038.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689229|gb|EFS26064.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           ulcerans ATCC 49185]
          Length = 225

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 16/180 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +        K+   +ILD+GTG G + + L  +       G+DI  + +E+A+ N 
Sbjct: 27  VDAVILSDFFAYPKKG--KILDIGTGNGVIPILLSSKEKGEDITGIDIQEENIELAEKNI 84

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLG---LEVRDFDPRISLD 197
             N + E    +  D    S+   FD IVSNPPY+E             +   + +++L 
Sbjct: 85  ELNCLKENIKIVHGDVKEYSMGNSFDYIVSNPPYMEVDGKKQNILSCKSIARHEIKLNLS 144

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
                      +     R L   G  S+     +  D+ RI E     L      Y   +
Sbjct: 145 ----------QLVQSAKRLLKPVGSFSLVHRSYRFTDISRILEDSGFSLKRVRFVYFSKE 194


>gi|240104027|ref|YP_002960336.1| Ribosomal RNA small subunit methyltransferase C (rsmC)
           [Thermococcus gammatolerans EJ3]
 gi|239911581|gb|ACS34472.1| Ribosomal RNA small subunit methyltransferase C (rsmC)
           [Thermococcus gammatolerans EJ3]
          Length = 195

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 72/206 (34%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL+++ +             R+LDLG G GA+ + +  
Sbjct: 25  YCFKFITASGVFSFGKLDRGTELLIENMVLDR--------GWRVLDLGCGYGAIGI-VAS 75

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  V  D++ +A+ IA+ N   NGV    +      +  V+G  FD I++NPP   
Sbjct: 76  RFVDY-VVMTDVNKRAVSIARKNLKINGVR-NAEVRWGSLYEPVKGEKFDSIITNPPVHA 133

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                                    G    R I     RHLN  GL  + I   Q    +
Sbjct: 134 -------------------------GKEVLREIVINAPRHLNDGGLLQLVIKTKQGAKYI 168

Query: 237 RIFESRKLFLVNA------FKDYGGN 256
           +         V        ++ Y G 
Sbjct: 169 KALMEETFTEVRELAKGSGYRVYAGI 194


>gi|289580772|ref|YP_003479238.1| methylase [Natrialba magadii ATCC 43099]
 gi|289530325|gb|ADD04676.1| methylase [Natrialba magadii ATCC 43099]
          Length = 202

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 14/188 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + ++P  ++ELL ++A +    R  +     IL++GTG+G V   +  E+   + +  D+
Sbjct: 4   EVYQPAEDSELLAEAACSQLSKRGREGPDATILEVGTGSGYVANRVADET-GARVIASDL 62

Query: 130 SCKALEIAK------SNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           +  A+  A+      S+    G S   +T+++D  S   +  FD ++ NPPY+ +   + 
Sbjct: 63  NPHAVRQARSEGSEESSEKGTGRSGAVETVRADLVSPFADDTFDAVLFNPPYLPTEPENE 122

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFES 241
              +  +     +L GG DG +        V R L  DG+  + +     VD VV     
Sbjct: 123 WD-DWMEH----ALSGGEDGRAVIDPFLASVGRVLAPDGVVYLLVSSLTGVDEVVERAGE 177

Query: 242 RKLFLVNA 249
                V  
Sbjct: 178 EGFSAVAI 185


>gi|222036112|emb|CAP78857.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           LF82]
 gi|312948999|gb|ADR29826.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++   TNGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|323527499|ref|YP_004229652.1| methyltransferase small [Burkholderia sp. CCGE1001]
 gi|323384501|gb|ADX56592.1| methyltransferase small [Burkholderia sp. CCGE1001]
          Length = 375

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/230 (23%), Positives = 86/230 (37%), Gaps = 35/230 (15%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDS 84
           D  SV+  R+   L  A     K   I   LG R        +        P     +D 
Sbjct: 137 DEASVVSLRELLGLIGAHEWRKKGVEIPA-LGER--------IHPHYGVFSPVRGEYIDL 187

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                LP + K       D+GTGTG +  ALL +    K V  D   +AL  A+ N    
Sbjct: 188 VARTPLPSLNKA-----FDIGTGTGVLA-ALLAKRGVKKIVATDQDPRALACARENLTRL 241

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G  ++ + +Q+D F   EG   ++V NPP++ +     +   V D + R+ L        
Sbjct: 242 GYEQQVEVVQADLFP--EGRAPLVVCNPPWVPARPASPIEYAVYDPESRMLLG------- 292

Query: 205 HYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
                  G++ HL+    G   +    E  G   +  ++   +   L +V
Sbjct: 293 ----FLKGLAEHLSPGGEGWLILSDFAEHLGLRTREWLLAAIDDAGLTVV 338


>gi|296876352|ref|ZP_06900404.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432642|gb|EFH18437.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 197

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 74/199 (37%), Gaps = 39/199 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  ++ ++   +LD+G G G + L
Sbjct: 23  LLGQK----MNFYTDAGVF-----SKKMIDYGSQVLLSTLDFQEGESVLDVGCGYGPIGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VD++ +AL++AK NA  NGV  +     SD + +VEG+FD ++SNPP
Sbjct: 74  SLTKAQGVA-VTMVDVNERALDLAKKNASRNGVEAQI--FSSDVYEAVEGVFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      +  G   HL   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHQVITGSFEHLKPGGDLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E          K
Sbjct: 166 PSAKAKMEET-FGNCEIVK 183


>gi|110644807|ref|YP_672537.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli 536]
 gi|191174543|ref|ZP_03036040.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           F11]
 gi|300992719|ref|ZP_07179996.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|123147328|sp|Q0T8U3|RSMC_ECOL5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110346399|gb|ABG72636.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           536]
 gi|190905189|gb|EDV64831.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           F11]
 gi|300305215|gb|EFJ59735.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|323189785|gb|EFZ75063.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           RN587/1]
 gi|324007717|gb|EGB76936.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
 gi|324014050|gb|EGB83269.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++   TNGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|228989310|ref|ZP_04149301.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
           12442]
 gi|228770388|gb|EEM18961.1| hypothetical protein bpmyx0001_870 [Bacillus pseudomycoides DSM
           12442]
          Length = 213

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 69/175 (39%), Gaps = 37/175 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL++   AF +P I+      +LD+G G G + L+L KE        VD++ +AL +A
Sbjct: 60  SRLLIE---AFQMPDIKGD----VLDVGCGYGPIGLSLAKEFQERSVHMVDVNERALGLA 112

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K NA  N V E     QS  + +V+G +  I+SNPP                        
Sbjct: 113 KENAANNKV-ENVRIFQSSVYENVDGKYAAILSNPPIRA--------------------- 150

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLVNAF 250
               G      I +  + HL   G   + I   Q     + ++ E+     V   
Sbjct: 151 ----GKHIVHEILEKAAIHLVSGGELWIVIQKKQGAPSALKKLEET--FSEVEVV 199


>gi|194434182|ref|ZP_03066450.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1012]
 gi|194417619|gb|EDX33720.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 1012]
 gi|320179333|gb|EFW54291.1| Ribosomal RNA small subunit methyltransferase C [Shigella boydii
           ATCC 9905]
 gi|332083687|gb|EGI88905.1| ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae 155-74]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDIGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|322375416|ref|ZP_08049929.1| methyltransferase domain protein [Streptococcus sp. C300]
 gi|321279679|gb|EFX56719.1| methyltransferase domain protein [Streptococcus sp. C300]
          Length = 196

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GAQATMVDINNRALDLAQQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLKDRGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|319951337|ref|ZP_08025167.1| putative RNA methyltransferase [Dietzia cinnamea P4]
 gi|319435000|gb|EFV90290.1| putative RNA methyltransferase [Dietzia cinnamea P4]
          Length = 422

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 32/204 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+  +   F P R E   LV  A           D   + D+GTGTG +   L +   
Sbjct: 193 GARIHPAYGVFAPTRDEYIDLVADA-----GWPPGVDQPVVWDIGTGTGVLAAVLARRGA 247

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPP 173
               V  DI+ +A++ A+ N    G+ +R   ++ D +   +       G  DV+V NPP
Sbjct: 248 RA-VVASDINPRAVQCARGNVRRLGLEDRVTVVRGDLWPGDDDGVVNRSGRADVVVCNPP 306

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK--DGLCSV----EI 227
           +I       L   +  +DP                    +   L    +G   +    E 
Sbjct: 307 WIPGRPTSALEQGI--YDPDS---------DVLHRFLAELPVQLTPRGEGWLILSDLAEH 355

Query: 228 -GYNQKVDVVRIFESRKLFLVNAF 250
            G   + +++       L +V   
Sbjct: 356 LGLRTRDELLARIADAGLTVVGTH 379


>gi|331681354|ref|ZP_08381991.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H299]
 gi|331081575|gb|EGI52736.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H299]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---HRILGWRDFYNVRLTLSSDTF 72
           G+ S + ++   + L+              L+ + +    +  G      + +      F
Sbjct: 117 GVRSAEQMLSDYAPLNKMDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTVKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G + +A  + SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG    L   +T+  G  RHLN  G  
Sbjct: 273 ----DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|333011350|gb|EGK30764.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-272]
 gi|333012245|gb|EGK31627.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-227]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|306815434|ref|ZP_07449583.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           NC101]
 gi|305851096|gb|EFM51551.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           NC101]
          Length = 343

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++   TNGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|212546153|ref|XP_002153230.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
 gi|210064750|gb|EEA18845.1| RNA methyltransferase, putative [Penicillium marneffei ATCC 18224]
          Length = 362

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 96/296 (32%), Gaps = 68/296 (22%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
           +  L        + + +  ILG + F ++ +        PR ETE     A    +    
Sbjct: 67  QQELRRMCAGRGRGKPLQYILGDQPFGDLEILCQRGVLIPRAETESYTSHARDIIMKGPY 126

Query: 95  KRD---VVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTN--- 144
            +D    +RILDL +G+G + L L             VG+D+  +A+++++ N + N   
Sbjct: 127 AKDFRKSLRILDLCSGSGCISLLLHSLLASDIKDLTIVGIDVDPQAIKLSQKNKLHNIRR 186

Query: 145 -----GVSERFDTLQSDWFSSVE--------------------GLFDVIVSNPPYIESVI 179
                        ++ D   S++                      +DV++SNPPYI    
Sbjct: 187 GLLSSRAENEVYFIKFDILHSIQSGNSSLMGTLQSHFHASNTNNTWDVLISNPPYISPSN 246

Query: 180 V--DCLGLEVRDFDPRISLDGG--------IDGLS-------HYRTIADGVSRHLNKDGL 222
           +        VR ++P  +L             G          Y  +   V +   K  +
Sbjct: 247 LINGTTTRSVRRYEPIKALVPPVVDSSIWQDSGFEYVAREDIFYAVLLSLVDQLCVK--V 304

Query: 223 CSVEIGY-NQKVDV----VRIFESRK---------LFLVNAFKDYGGNDRVLLFCR 264
             +E G   Q   V      +FE                    D  G  R ++  R
Sbjct: 305 TVLECGDLEQAQRVVTMARALFEKVGDIAKQRVYIWDDCYTVNDDDGGARAVIIER 360


>gi|170288954|ref|YP_001739192.1| methyltransferase small [Thermotoga sp. RQ2]
 gi|170176457|gb|ACB09509.1| methyltransferase small [Thermotoga sp. RQ2]
          Length = 210

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 29/145 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    L  ++     ++LDLG G G + + L KE P  +    DI+ +A+E AK NA
Sbjct: 46  IDKATQVLLENLKVH-GKKVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINA 104

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + V    D    + +   EG  FD+IVSNPP +                         
Sbjct: 105 KNHNVE--VDIRWGNLYEPWEGMKFDMIVSNPPIVA------------------------ 138

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
            G   +  I       L + G   +
Sbjct: 139 -GKKVWMEIVKSAPEFLEEGGSLQI 162


>gi|154249952|ref|YP_001410777.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
 gi|154153888|gb|ABS61120.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
          Length = 206

 Score = 96.7 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 34/171 (19%)

Query: 61  YNVRLTL-SSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            +V L L +   ++ +  + +     VD A    +   E     ++LD+G G G + + L
Sbjct: 23  RDVELKLKNGHVYKFKSPSGVYSFGKVDKATEILINHCENISG-KVLDIGCGYGVIGITL 81

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
            KE+P  +    D++ +A+E AK NA  N +  + D  Q + +   EG LFD I+SNPP 
Sbjct: 82  KKENPSIELFMSDVNKRAVEFAKINAKDNNI--QADIRQGNLYEPWEGYLFDHIISNPPI 139

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +                          G   +  + +G  +HL   G   +
Sbjct: 140 VA-------------------------GKEVWMKLIEGAFQHLKDGGTLQL 165


>gi|281412563|ref|YP_003346642.1| methyltransferase small [Thermotoga naphthophila RKU-10]
 gi|281373666|gb|ADA67228.1| methyltransferase small [Thermotoga naphthophila RKU-10]
          Length = 210

 Score = 96.3 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 29/145 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    L  ++     ++LDLG G G + + L KE P  +    DI+ +A+E AK NA
Sbjct: 46  IDKATQVLLENLKVH-GKKVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINA 104

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + V    D    + +   EG  FD+IVSNPP +                         
Sbjct: 105 KNHNVE--VDIRWGNLYEPWEGMKFDMIVSNPPIVA------------------------ 138

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
            G   +  I       L + G   +
Sbjct: 139 -GKKVWMEIVKRAPEFLEEGGSLQI 162


>gi|307709017|ref|ZP_07645477.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
 gi|307620353|gb|EFN99469.1| hypothetical protein SMSK564_0264 [Streptococcus mitis SK564]
          Length = 193

 Score = 96.3 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGEK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAF-GVQATMVDINNRALDLAQQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 163 PSAKSKMEEVFGNCEVVKKDKGYYILRSVK 192


>gi|332083363|gb|EGI88594.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           5216-82]
          Length = 343

 Score = 96.3 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDIGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EIFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|307706395|ref|ZP_07643206.1| methyltransferase domain protein [Streptococcus mitis SK321]
 gi|307618211|gb|EFN97367.1| methyltransferase domain protein [Streptococcus mitis SK321]
          Length = 193

 Score = 96.3 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGEK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V+      QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINNRALDLARQNAERNKVAA--TIFQSNIYEQVEGKFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEIVKKDKGYYILRSVK 192


>gi|25028365|ref|NP_738419.1| hypothetical protein CE1809 [Corynebacterium efficiens YS-314]
 gi|23493650|dbj|BAC18619.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 523

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 21/187 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  L V +A    L         R+LDLGTG+G   L   +          DI  +
Sbjct: 146 VPGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLG--QAGSTTSITATDIHPR 203

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL+ A++  V +G+    + L+  WF  V G  FD I++NPP++          E+    
Sbjct: 204 ALDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFVVG------PPEIG--- 252

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE------IGYNQKVDVVRIFESRKLF 245
             +  D G+D     R + +   RHL   G   +        G + +  V          
Sbjct: 253 -HVYRDSGMDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRVADWLPDEGFA 311

Query: 246 LVNAFKD 252
                +D
Sbjct: 312 AWIIQRD 318


>gi|309704829|emb|CBJ04180.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           ETEC H10407]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|291037415|ref|ZP_06568379.1| HemK family modification methylase [Gluconacetobacter xylinus NBRC
           3288]
          Length = 302

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/207 (25%), Positives = 79/207 (38%), Gaps = 28/207 (13%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G   F++   T + D     P++     + LA  L        VR +D+G GTG   + +
Sbjct: 85  GNGFFHSAFPTDAEDAVFFGPDSYRF-GAVLAAHLR--SAPPPVRAVDIGCGTGLGAIMV 141

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +  P  + V VDI+  AL +A+ NA   GV       Q D  S + G FD+I+SNPPY+
Sbjct: 142 AQACPGTEVVMVDINPGALRLARINARIAGVDG-IRAWQGDLLSGLAGEFDLILSNPPYL 200

Query: 176 ESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLNKDGLCSVEIG---- 228
                            R+  +GG    +GLS    +       L   G   +  G    
Sbjct: 201 PDPGC------------RLYRNGGGRLGEGLSL--AVVRTAMERLAPGGTLLLYTGTAII 246

Query: 229 ---YNQKVDVVRIFESRKLFLVNAFKD 252
                   DV  + + R      +  D
Sbjct: 247 DGDNPFLRDVAALLDGRDFTWAASELD 273


>gi|302345345|ref|YP_003813698.1| methyltransferase small domain protein [Prevotella melaninogenica
           ATCC 25845]
 gi|302149227|gb|ADK95489.1| methyltransferase small domain protein [Prevotella melaninogenica
           ATCC 25845]
          Length = 236

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 16/161 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GTGTG + L + +     +   ++I   ALE A  N   +  ++R + L S
Sbjct: 31  KGGTRILDIGTGTGLIALMMAQRFSTAQIDAIEIDKGALEDAHLNVSASPFNDRINILNS 90

Query: 156 DWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                +       EG++D IV NPPY  + + + L           +     D LSH + 
Sbjct: 91  SLQDYIPCSETQEEGIYDAIVCNPPYFINSLKNPLQQ--------RTTARHTDTLSH-QE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +     R L  +G  SV I Y+ K  +        L ++  
Sbjct: 142 LIYHSKRLLKANGTLSVIIPYDNKDILEAEAIFNGLSILKI 182


>gi|111025328|ref|YP_707748.1| methyltransferase [Rhodococcus jostii RHA1]
 gi|110824307|gb|ABG99590.1| methyltransferase [Rhodococcus jostii RHA1]
          Length = 260

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 25/183 (13%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              +  + ++  LV+     +L +       R+LDL  GTG + +    +    +   VD
Sbjct: 51  PGVYPAQHDSWALVE-----ALKQETLGSDSRVLDLCAGTGVLSV-CAVKQGAGRVTAVD 104

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A      NA  +  S R   ++ D    V    FD++VSNPPY+ +         V
Sbjct: 105 VSRRAFATTWINARLHRRSVRV--VRGDLTEPVRSERFDLVVSNPPYVPAETAGLPYSGV 162

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE------IGYNQKVDVVRIFES 241
                    D G DG +    I   V   L   G+  +       IG +Q      + E 
Sbjct: 163 ARS-----WDAGTDGRAVLDRICVQVPDVLKAGGVLLLVQSSLSGIGKSQ-----TMLEE 212

Query: 242 RKL 244
           R L
Sbjct: 213 RGL 215


>gi|260906701|ref|ZP_05915023.1| hypothetical protein BlinB_15332 [Brevibacterium linens BL2]
          Length = 439

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 22/176 (12%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A A      E        DLGTGTG +  A+L      + V  DI+ +A+  A+ N   
Sbjct: 246 EASAPQSSAPEPSAPQTAFDLGTGTGVLA-AVLLRRGVERVVATDINPRAVACAQENLDR 304

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G++   + +++D F S  G  D+IV NPP++ +     L  E   +DP         G 
Sbjct: 305 LGLASSAEVVEADLFPS--GRADLIVCNPPWLPARPTSAL--EAGIYDP---------GS 351

Query: 204 SHYRTIADGVSRHLNK--DGLCSV----EI-GYNQKVDVVRIFESRKLFLVNAFKD 252
                  DG++ +LN   +G   +    E  G   +  ++    +  L  V+   D
Sbjct: 352 DVLHRFIDGLAAYLNPAGEGWLILSDLAEHLGLRTREALLERITAAGLR-VHDRHD 406


>gi|323475067|gb|ADX85673.1| methyltransferase small [Sulfolobus islandicus REY15A]
          Length = 186

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 38/182 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I+  +   + D+G G G + + L  ++P  K   VD++  A+++AK NA 
Sbjct: 31  DLGTRVLLENIKLAESGIVADVGCGYGPIGIYLALKNPNLKVYMVDVNYIAIKLAKKNAK 90

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NGV  R   L+SD F    V+  F+ I SNPP                           
Sbjct: 91  FNGVENRTIILKSDIFDNVPVDVKFNAIYSNPPL-------------------------S 125

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----------ESRKLFLVNAF 250
            G+   + + D     L + G   + + Y  + ++ +IF            +   L+   
Sbjct: 126 KGVDFLKKLEDQSYDRLVEKGFLQL-VAYKGEENIEKIFGKRFKIESIKRKKGYSLITIV 184

Query: 251 KD 252
           KD
Sbjct: 185 KD 186


>gi|293408055|ref|ZP_06651895.1| rsmC [Escherichia coli B354]
 gi|291472306|gb|EFF14788.1| rsmC [Escherichia coli B354]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|218692758|ref|YP_002400970.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ED1a]
 gi|226712942|sp|B7MTB6|RSMC_ECO81 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218430322|emb|CAR11192.1| 16S RNA m2G1207 methylase [Escherichia coli ED1a]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++   TNGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|306833532|ref|ZP_07466659.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
 gi|304424302|gb|EFM27441.1| methyltransferase domain protein [Streptococcus bovis ATCC 700338]
          Length = 197

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 69/192 (35%), Gaps = 35/192 (18%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ ++D      L  ++      +LDLG G G + ++L K   
Sbjct: 26  HPFTFLTDSGVF-----SKKMIDYGSQVLLNTLDFEKSKTLLDLGCGYGPLGISLAK-VQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDI+ +A+++A+ NA  NGV+      QS+ +  V G FD I+SNPP       
Sbjct: 80  GVQATMVDINNRAIDLAQKNAEKNGVTANI--FQSNIYEKVSGTFDYIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIF 239
                                G     TI      +L   G  ++ I   Q         
Sbjct: 134 ---------------------GKQVVHTIIADSINYLKDGGHLTIVIQKKQGAPSAKAKM 172

Query: 240 ESRKLFLVNAFK 251
           E      V+  K
Sbjct: 173 EEI-FGNVDILK 183


>gi|301330281|ref|ZP_07222935.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
 gi|300843740|gb|EFK71500.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|302529500|ref|ZP_07281842.1| ElmF protein [Streptomyces sp. AA4]
 gi|302438395|gb|EFL10211.1| ElmF protein [Streptomyces sp. AA4]
          Length = 376

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 77/203 (37%), Gaps = 29/203 (14%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDS 84
           P +++  R+     +A         I  +         RL  +   F P R E   LV  
Sbjct: 135 PGTLISLRELLGALSAYQWHQNGIPIKAL-------GARLYPAYSVFAPTRSEYLDLV-- 185

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
               +   +       + DLGTGTG +  A+L      + V  D++  A+  A+ N    
Sbjct: 186 ----AQEPLPGNGSPVVFDLGTGTGVLA-AILARRGAAEVVATDLNPLAVRCARDNLRRL 240

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G+S+R    ++D + S +   D++V NPP++       L  E+  +DP  +         
Sbjct: 241 GLSDRVQVRETDLWPS-DRRADLVVCNPPWLPGNPSSAL--ELGIYDPSSA--------- 288

Query: 205 HYRTIADGVSRHLNKD--GLCSV 225
                 DG+  HL     G   +
Sbjct: 289 MLNRFLDGLPGHLTPHGEGWLIL 311


>gi|259507422|ref|ZP_05750322.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314]
 gi|259164987|gb|EEW49541.1| rRNA or tRNA methylase [Corynebacterium efficiens YS-314]
          Length = 515

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 71/187 (37%), Gaps = 21/187 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  L V +A    L         R+LDLGTG+G   L   +          DI  +
Sbjct: 138 VPGPDHVLGVGAASLSLLQATPVSPTGRVLDLGTGSGIQVLG--QAGSTTSITATDIHPR 195

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL+ A++  V +G+    + L+  WF  V G  FD I++NPP++          E+    
Sbjct: 196 ALDFAEATLVDSGIP--VELLEGSWFDPVSGRDFDRIIANPPFVVG------PPEIG--- 244

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE------IGYNQKVDVVRIFESRKLF 245
             +  D G+D     R + +   RHL   G   +        G + +  V          
Sbjct: 245 -HVYRDSGMDLDGATRLVVEQACRHLAPGGTAHLLGAWVHSTGMSWQQRVADWLPDEGFA 303

Query: 246 LVNAFKD 252
                +D
Sbjct: 304 AWIIQRD 310


>gi|261378754|ref|ZP_05983327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685]
 gi|269144909|gb|EEZ71327.1| methyltransferase domain protein [Neisseria cinerea ATCC 14685]
          Length = 367

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++ +    F P     L         L +         LD+GTG+G +   L K+   
Sbjct: 160 GGQIHVPFGVFSPLRGEYL-------DLLAQAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + +A+  A++N    G+ ++ +  ++D F  +    D+IV NPP++ +    
Sbjct: 212 SSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM--RADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                    HLN DG   + I
Sbjct: 270 AI--ESALYDPDSA---------MLTAFLRDAPEHLNPDGEIRLII 304


>gi|91214024|ref|YP_544010.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UTI89]
 gi|117626683|ref|YP_860006.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli APEC
           O1]
 gi|122421235|sp|Q1R2D5|RSMC_ECOUT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712946|sp|A1AJP2|RSMC_ECOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91075598|gb|ABE10479.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           UTI89]
 gi|115515807|gb|ABJ03882.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           APEC O1]
 gi|294491814|gb|ADE90570.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           IHE3034]
 gi|307629539|gb|ADN73843.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UM146]
 gi|323950544|gb|EGB46422.1| methyltransferase small domain-containing protein [Escherichia coli
           H252]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++   TNGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLATNGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|306825048|ref|ZP_07458390.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
 gi|304432484|gb|EFM35458.1| methyltransferase domain protein [Streptococcus sp. oral taxon 071
           str. 73H25AP]
          Length = 196

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     N+     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGE----NMTFLTDAGVF-----SKKMVDFGSQLLLKCLEVNKGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLTKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSRDFLKDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEIIKKDKGYYILRSVK 195


>gi|218708048|ref|YP_002415567.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           UMN026]
 gi|293403039|ref|ZP_06647136.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1412]
 gi|298378566|ref|ZP_06988450.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1302]
 gi|300899328|ref|ZP_07117593.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|301027007|ref|ZP_07190391.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
 gi|226712948|sp|B7NH38|RSMC_ECOLU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218435145|emb|CAR16103.1| 16S RNA m2G1207 methylase [Escherichia coli UMN026]
 gi|291429954|gb|EFF02968.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1412]
 gi|298280900|gb|EFI22401.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           FVEC1302]
 gi|300357063|gb|EFJ72933.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|300395231|gb|EFJ78769.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|167571407|ref|ZP_02364281.1| protein hemK [Burkholderia oklahomensis C6786]
          Length = 103

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 37/80 (46%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL 65
           D+   L    G +  Q+I   D  LD            R    E + ++ G R+F+ +  
Sbjct: 24  DARILLAHALGWTRTQLITRADEPLDAAAVERYLALEARRAAGEPVAQLTGAREFFGLEF 83

Query: 66  TLSSDTFEPRPETELLVDSA 85
            ++ D   PRPETELLV++A
Sbjct: 84  EITPDVLIPRPETELLVETA 103


>gi|15804942|ref|NP_290984.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 EDL933]
 gi|15834583|ref|NP_313356.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750994|ref|ZP_02776016.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4113]
 gi|168766650|ref|ZP_02791657.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4486]
 gi|168776653|ref|ZP_02801660.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4196]
 gi|168781658|ref|ZP_02806665.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4076]
 gi|168785012|ref|ZP_02810019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC869]
 gi|168797941|ref|ZP_02822948.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC508]
 gi|195937642|ref|ZP_03083024.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806907|ref|ZP_03249244.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814485|ref|ZP_03255814.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819277|ref|ZP_03259597.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398157|ref|YP_002273891.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4115]
 gi|217326219|ref|ZP_03442303.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. TW14588]
 gi|254796366|ref|YP_003081203.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. TW14359]
 gi|261226727|ref|ZP_05941008.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256889|ref|ZP_05949422.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. FRIK966]
 gi|81764381|sp|Q8X510|RSMC_ECO57 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712940|sp|B5Z4Q2|RSMC_ECO5E RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|12519394|gb|AAG59551.1|AE005668_6 putative enzyme [Escherichia coli O157:H7 str. EDL933]
 gi|13364807|dbj|BAB38752.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           O157:H7 str. Sakai]
 gi|187768028|gb|EDU31872.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014927|gb|EDU53049.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4113]
 gi|189000759|gb|EDU69745.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4076]
 gi|189364171|gb|EDU82590.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4486]
 gi|189375045|gb|EDU93461.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC869]
 gi|189379587|gb|EDU98003.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC508]
 gi|208726708|gb|EDZ76309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735762|gb|EDZ84449.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739400|gb|EDZ87082.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4042]
 gi|209159557|gb|ACI36990.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC4115]
 gi|209748990|gb|ACI72802.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748992|gb|ACI72803.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748996|gb|ACI72805.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|217322440|gb|EEC30864.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. TW14588]
 gi|254595766|gb|ACT75127.1| 16S rRNA m2G1207 methylase [Escherichia coli O157:H7 str. TW14359]
 gi|320190514|gb|EFW65164.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. EC1212]
 gi|320638709|gb|EFX08370.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. G5101]
 gi|326345317|gb|EGD69060.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. 1125]
 gi|326346829|gb|EGD70563.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           O157:H7 str. 1044]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|119714639|ref|YP_921604.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119535300|gb|ABL79917.1| methyltransferase small [Nocardioides sp. JS614]
          Length = 486

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 12/165 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++   L   +    P+  L + +A         +  V R LDLGTG G   L L +    
Sbjct: 120 DLTPGLDGGSSRVGPQHVLGISAASTSLAQLTLREPVGRALDLGTGCGVQALHLARHC-- 177

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
            + V  D++ +AL IA+ N   N V+   D     +F  V +  FD+IV+NPP++ S   
Sbjct: 178 SEVVATDVNQRALRIARFNLDLNAVTTPVDVRAGSFFEPVADDTFDLIVTNPPFVISPAT 237

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     +  +  D G+ G      I    + HLN+ G C V
Sbjct: 238 G---------ERLVYRDSGLPGDRVVEDIVRQAAAHLNEGGWCQV 273


>gi|218698207|ref|YP_002405874.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           55989]
 gi|237704107|ref|ZP_04534588.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           3_2_53FAA]
 gi|260847187|ref|YP_003224965.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
           12009]
 gi|300905357|ref|ZP_07123127.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301303471|ref|ZP_07209594.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|226712939|sp|B7LEL6|RSMC_ECO55 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218354939|emb|CAV02161.1| 16S RNA m2G1207 methylase [Escherichia coli 55989]
 gi|226902019|gb|EEH88278.1| ribosomal RNA small subunit methyltransferase C [Escherichia sp.
           3_2_53FAA]
 gi|257762334|dbj|BAI33831.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O103:H2 str.
           12009]
 gi|281181513|dbj|BAI57843.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           SE15]
 gi|300402766|gb|EFJ86304.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300841198|gb|EFK68958.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|315255771|gb|EFU35739.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
 gi|315284963|gb|EFU44408.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|323163257|gb|EFZ49088.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E128010]
 gi|323955326|gb|EGB51098.1| methyltransferase small domain-containing protein [Escherichia coli
           H263]
          Length = 343

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|238022326|ref|ZP_04602752.1| hypothetical protein GCWU000324_02233 [Kingella oralis ATCC 51147]
 gi|237866940|gb|EEP67982.1| hypothetical protein GCWU000324_02233 [Kingella oralis ATCC 51147]
          Length = 360

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 41/222 (18%)

Query: 50  SIHRILG------WRDFY------NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKR 96
            + ++LG      W             + +    F P R E   L+  A   +       
Sbjct: 128 PLAQLLGFIGAHEWHKKGVTIPELGGVIHVPFGVFSPIRGEYLSLIAQAKLPA------- 180

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +    LD+GTG+G +  ALL +      +  D + +A+  A++N    G + + + LQ D
Sbjct: 181 NAHTALDVGTGSGVIA-ALLAQRGVAHIIATDTNPRAIACAQANIARLGFAPQINVLQQD 239

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F   E   D+IV NPP++ +     +  E   +D + +                G + H
Sbjct: 240 LFG--EHTADLIVCNPPWLPAKPTSAV--ETALYDLKHA---------MLHAFLRGAAAH 286

Query: 217 LNKDGLCSVEI-------GYNQKVDVVRIFESRKLFLVNAFK 251
           L + G   + +       G     D+   F      +V + K
Sbjct: 287 LAQGGQVWLVMSNLAELLGLRGAHDLANWFAQYGWRVVGSLK 328


>gi|225858641|ref|YP_002740151.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 70585]
 gi|225721043|gb|ACO16897.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 70585]
          Length = 193

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGNLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|295401929|ref|ZP_06811892.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109252|ref|YP_003987568.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
 gi|294976059|gb|EFG51674.1| methyltransferase small [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214353|gb|ADP72957.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
          Length = 200

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 77/207 (37%), Gaps = 49/207 (23%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++  T  S  F  R     T LL+++   F  P ++       LD+G G G + LA+ K
Sbjct: 26  HDLTFTTDSGVFSKREVDFGTRLLIET---FEEPDVDGG----FLDVGCGYGPIGLAVAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
             P      +DI+ +ALE+A  N   N ++      +SD F  V +  F  I++NPP   
Sbjct: 79  SFPNRHVDMIDINKRALELANENKRVNHIA-NVSIYESDLFEQVGDKKFAAILTNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--- 233
                                    G      I +  + HL  DG   V I   Q     
Sbjct: 138 -------------------------GKRVVYAIFEQSAAHLYPDGELWVVIQKKQGAPSA 172

Query: 234 --DVVRIF-------ESRKLFLVNAFK 251
              +  IF       + +  +++ + K
Sbjct: 173 LKKLQEIFSCVEVVTKKKGYYIIKSKK 199


>gi|229579608|ref|YP_002838007.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14]
 gi|228010323|gb|ACP46085.1| methyltransferase small [Sulfolobus islandicus Y.G.57.14]
          Length = 186

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 38/182 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I+  +   + D+G G G + + L  ++   K   VD++  A+++AK NA 
Sbjct: 31  DLGTRVLLENIKLAESGIVADVGCGYGPIGIYLALKNHNLKVYMVDVNYIAIKLAKKNAK 90

Query: 143 TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NGV  R   L+SD F    VE  F+ I SNPP                           
Sbjct: 91  LNGVENRTIILKSDIFDNVPVEVKFNAIYSNPPL-------------------------S 125

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF----------ESRKLFLVNAF 250
            G+   + + D     L + G   + + Y  + ++ +IF            +   L+   
Sbjct: 126 KGVDFLKKLEDQSYDRLVEKGFLQL-VAYKGEENIEKIFGKRFKIESIKRKKGYSLITIV 184

Query: 251 KD 252
           KD
Sbjct: 185 KD 186


>gi|225023405|ref|ZP_03712597.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC
           23834]
 gi|224943883|gb|EEG25092.1| hypothetical protein EIKCOROL_00263 [Eikenella corrodens ATCC
           23834]
          Length = 369

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 30/192 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+ +    F P R E   L+  A A   PR +        D+GTG+G +  ALL    
Sbjct: 158 GARIHVPFGVFSPLRGEYLGLI--AAAPLPPRAQSA-----FDIGTGSGVIA-ALLARRG 209

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D S +A+  A++N    G+      LQ+D F   EG  D+IV NPP++ +   
Sbjct: 210 LQPVTATDNSPRAVACARANFQRLGLPP-IRLLQTDLFP--EGCADLIVCNPPWLPAKPA 266

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------EI-GYNQKV 233
             +  E   +DP         G +  ++       HLN  G   +      E  G  Q  
Sbjct: 267 ADI--ETALYDP---------GSAMLQSFLQQAPAHLNPGGQIWLIMSDLAEHLGLRQPN 315

Query: 234 DVVRIFESRKLF 245
           ++     +  L 
Sbjct: 316 ELAERIAAAGLT 327


>gi|329120300|ref|ZP_08248968.1| methyltransferase domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327462641|gb|EGF08964.1| methyltransferase domain protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 378

 Score = 96.3 bits (239), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 22/165 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++ +    F P R E   LV  A A S             D+GTG+G +  ALL +  
Sbjct: 167 GAKIHVPFGVFSPIRGEYLDLVAQAAAHSR-------FQTAFDIGTGSGILA-ALLAQRG 218

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D + +AL  A++N    G ++     ++D F   EG  D+I+ NPP++ +   
Sbjct: 219 ITCITATDNNPRALACARANIRRLGFADNISVEEADLFP--EGRADLILCNPPWLPAKPT 276

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +  E   +DP         G +  R   +G + HLN +G   +
Sbjct: 277 SAI--ETALYDP---------GHAMLRGFLNGAAAHLNPNGEIWL 310


>gi|167856203|ref|ZP_02478939.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755]
 gi|167852658|gb|EDS23936.1| hypothetical protein HPS_02890 [Haemophilus parasuis 29755]
          Length = 235

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +   ILDLGTGTG + + L + +   +   +++   A   A+ NA     + R D L
Sbjct: 32  DPSNARHILDLGTGTGLIAIMLAQRTASAQITALELEENAFHQAQENAQHCPWNNRIDVL 91

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTI 209
           Q++  +      FD+IVSNPPY E  +        R+    ++        D L      
Sbjct: 92  QANIMTWKSTKKFDLIVSNPPYFEHSLAS------RNKQRDLARAVTYSHFDWL------ 139

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + L  +G  S  +  +    ++       L+ +  +
Sbjct: 140 -KRAQQWLTPNGRISFILPIDAGKKLLEQSHLLGLYCIEYW 179


>gi|254240607|ref|ZP_04933929.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
 gi|126193985|gb|EAZ58048.1| hypothetical protein PA2G_01266 [Pseudomonas aeruginosa 2192]
          Length = 316

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 14/175 (8%)

Query: 55  LGWRDFYNVRL-TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           LG + F +    TL++D     P+T    D  +   L   +   + R  D+G G G   +
Sbjct: 94  LGEQLFVHSAFPTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAI 152

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +    P  +  G+DI+  AL++A+ NA   GV       +SD  S V G FD+IV+NPP
Sbjct: 153 RIAMACPDAEVHGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQVPGRFDLIVANPP 211

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           Y+    +D      R         GG+ G      I D     L   G   +  G
Sbjct: 212 YL----LDASERAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|170021670|ref|YP_001726624.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli ATCC
           8739]
 gi|188494749|ref|ZP_03002019.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           53638]
 gi|291285749|ref|YP_003502567.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
 gi|300918454|ref|ZP_07135051.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300932046|ref|ZP_07147341.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|300946754|ref|ZP_07161002.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300959114|ref|ZP_07171200.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|301646887|ref|ZP_07246733.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|307136569|ref|ZP_07495925.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli H736]
 gi|312966083|ref|ZP_07780309.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           2362-75]
 gi|331640412|ref|ZP_08341560.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H736]
 gi|226712947|sp|B1IS49|RSMC_ECOLC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169756598|gb|ACA79297.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|188489948|gb|EDU65051.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           53638]
 gi|209748988|gb|ACI72801.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|209748994|gb|ACI72804.1| ribosomal RNA small subunit methyltransferase [Escherichia coli]
 gi|284924549|emb|CBG37688.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           042]
 gi|290765622|gb|ADD59583.1| 16S RNA G1207 methylase RsmC [Escherichia coli O55:H7 str. CB9615]
 gi|300314262|gb|EFJ64046.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|300414377|gb|EFJ97687.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300453578|gb|EFK17198.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300460191|gb|EFK23684.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|301074940|gb|EFK89746.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|312289326|gb|EFR17220.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           2362-75]
 gi|320644112|gb|EFX13187.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H- str. 493-89]
 gi|320649429|gb|EFX17965.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H- str. H 2687]
 gi|320654830|gb|EFX22799.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320660682|gb|EFX28143.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320665519|gb|EFX32569.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323960144|gb|EGB55788.1| methyltransferase small domain-containing protein [Escherichia coli
           H489]
 gi|323965372|gb|EGB60828.1| methyltransferase small domain-containing protein [Escherichia coli
           M863]
 gi|327250301|gb|EGE62020.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           STEC_7v]
 gi|331040158|gb|EGI12365.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H736]
          Length = 343

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|187925511|ref|YP_001897153.1| methyltransferase small [Burkholderia phytofirmans PsJN]
 gi|187716705|gb|ACD17929.1| methyltransferase small [Burkholderia phytofirmans PsJN]
          Length = 374

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 30/204 (14%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
            D  SV+  R+   +  A     K   I   LG R        +        P     VD
Sbjct: 136 TDEPSVVSLRELLGMIGAHEWRRKGVEIPA-LGER--------IHPHYGVFSPVRGEYVD 186

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              +  LP + K       D+GTGTG +  ALL +    K V  D   +AL  A+ N   
Sbjct: 187 LVASTPLPSLNKA-----FDIGTGTGVLS-ALLAKRGVKKIVATDQDPRALACARENLTR 240

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G  ++ D +Q+D F   EG   ++VSNPP++ +     +   + D + R+ L G ++GL
Sbjct: 241 LGYDQQVDVVQADLFP--EGRAPLVVSNPPWVPARPASPIEYAIYDPESRM-LLGFLNGL 297

Query: 204 SHYRTIADGVSRHLNKD--GLCSV 225
                     + HL+    G   +
Sbjct: 298 ----------AEHLSPGGEGWLIM 311


>gi|17547878|ref|NP_521280.1| hypothetical protein RSc3159 [Ralstonia solanacearum GMI1000]
 gi|17430184|emb|CAD16947.1| conserved hypothetical protein 1177;methyltransferase small
           [Ralstonia solanacearum GMI1000]
          Length = 376

 Score = 95.9 bits (238), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 74/194 (38%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A                 D+GTGTG +   L K   
Sbjct: 169 GARIHPHYGVFSPVRGEYVDLVAKA--------PLPSQALAFDIGTGTGVLAAVLAKRGV 220

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D   +AL  A  N    G+  + + +++D F   EG   +IV NPP++ +   
Sbjct: 221 K-RVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--EGRAPLIVCNPPWLPARPS 277

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R   DG++ HL     G   +    E  G   + 
Sbjct: 278 SPIERAVYDPDSRM-----------LRGFLDGLAAHLEPGGEGWLILSDFAEHLGLRTRD 326

Query: 234 DVVRIFESRKLFLV 247
            ++ + E+  L +V
Sbjct: 327 ALLAMIEAAGLQVV 340


>gi|331666038|ref|ZP_08366932.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA143]
 gi|331057089|gb|EGI29083.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA143]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|300939355|ref|ZP_07154023.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300455759|gb|EFK19252.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|218262704|ref|ZP_03477062.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223193|gb|EEC95843.1| hypothetical protein PRABACTJOHN_02741 [Parabacteroides johnsonii
           DSM 18315]
          Length = 238

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 15/151 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SD 156
           RILD+GTGTG + + L + S       +DI  +A   A+ NA ++  +ER        SD
Sbjct: 40  RILDIGTGTGLIAMMLAQRS-KAVIDAIDIDAEACLQAQENAESSPFAERIKIQHSALSD 98

Query: 157 WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +  +  GL+D+IVSNPPY ++S+               ++L            +     +
Sbjct: 99  FAQTDTGLYDLIVSNPPYFVDSLKCPDQKRNTARHTDTLTL----------EDLLQDSRK 148

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L   G  ++ + Y+QK  +     ++ LFL
Sbjct: 149 LLAPQGRIALILPYDQKERLTDCIRTQNLFL 179


>gi|168984589|emb|CAQ12137.1| HemK methyltransferase family member 1 [Mus musculus]
          Length = 121

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             D++VSNPPYI    ++ L  E+  ++  ++LDGG +G+     I     + LN  G  
Sbjct: 15  PLDLVVSNPPYIFRKDMEQLAPEICSYEDLVALDGGDEGMDIITHILTLAPQLLNASGSI 74

Query: 224 SVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGGNDRVLLFCR 264
            +E+       V    +S     L LV   +D+ G  R L   +
Sbjct: 75  FLEVDPRHPELVSSWLQSHPDLHLSLVGVREDFCGRPRFLHVQK 118


>gi|301022273|ref|ZP_07186171.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|299881323|gb|EFI89534.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLMLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|289192748|ref|YP_003458689.1| methyltransferase small [Methanocaldococcus sp. FS406-22]
 gi|288939198|gb|ADC69953.1| methyltransferase small [Methanocaldococcus sp. FS406-22]
          Length = 197

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 40/193 (20%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++    +  F        T++LV++ +      ++K D   ILDLG G G + +AL  E 
Sbjct: 26  LKFKTDAGVFSYGKVDKGTKILVENVI------VDKDDD--ILDLGCGYGVIGIALADEV 77

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   DI+ +A+++AK N   N +       + SD + +V    +D I++NPP    
Sbjct: 78  K--SVTMADINRRAIKLAKENIKLNNLEGYDIRVIHSDLYENVRDREYDKIITNPPIRA- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G      I       L + G   V I   Q    + 
Sbjct: 135 ------------------------GKEVLHKIIKEGKEILKEGGEIWVVIQTKQGAKSLA 170

Query: 238 IFESRKLFLVNAF 250
            F       V   
Sbjct: 171 KFMEEVFGNVETV 183


>gi|307127610|ref|YP_003879641.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 670-6B]
 gi|301801668|emb|CBW34371.1| putative methyltransferase [Streptococcus pneumoniae INV200]
 gi|306484672|gb|ADM91541.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae 670-6B]
 gi|332077252|gb|EGI87714.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17545]
          Length = 193

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|183603300|ref|ZP_02713985.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae SP195]
 gi|225856507|ref|YP_002738018.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae P1031]
 gi|237650831|ref|ZP_04525083.1| methyltransferase small domain superfamily protein [Streptococcus
           pneumoniae CCRI 1974]
 gi|183571845|gb|EDT92373.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae SP195]
 gi|225724345|gb|ACO20197.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae P1031]
 gi|301799838|emb|CBW32410.1| putative methyltransferase [Streptococcus pneumoniae OXC141]
 gi|332073168|gb|EGI83647.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17570]
 gi|332076119|gb|EGI86585.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41301]
          Length = 193

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|183603138|ref|ZP_02964308.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1087-00]
 gi|183571063|gb|EDT91591.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1087-00]
 gi|332202695|gb|EGJ16764.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41317]
          Length = 193

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|182683753|ref|YP_001835500.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
 gi|303254023|ref|ZP_07340141.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
           BS455]
 gi|303260303|ref|ZP_07346274.1| hypothetical protein CGSSp9vBS293_03683 [Streptococcus pneumoniae
           SP-BS293]
 gi|303261509|ref|ZP_07347457.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264177|ref|ZP_07350098.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
           BS397]
 gi|303267043|ref|ZP_07352915.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
           BS457]
 gi|303269195|ref|ZP_07354972.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
           BS458]
 gi|182629087|gb|ACB90035.1| hypothetical protein SPCG_0783 [Streptococcus pneumoniae CGSP14]
 gi|302599003|gb|EFL66031.1| hypothetical protein CGSSpBS455_01006 [Streptococcus pneumoniae
           BS455]
 gi|302637643|gb|EFL68130.1| hypothetical protein CGSSp14BS292_09260 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638627|gb|EFL69091.1| hypothetical protein CGSSpBS293_03683 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641259|gb|EFL71629.1| hypothetical protein CGSSpBS458_02909 [Streptococcus pneumoniae
           BS458]
 gi|302643437|gb|EFL73712.1| hypothetical protein CGSSpBS457_00275 [Streptococcus pneumoniae
           BS457]
 gi|302646582|gb|EFL76808.1| hypothetical protein CGSSpBS397_06242 [Streptococcus pneumoniae
           BS397]
          Length = 196

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|149010531|ref|ZP_01831902.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           SP19-BS75]
 gi|147765012|gb|EDK71941.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           SP19-BS75]
          Length = 196

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|148986069|ref|ZP_01819090.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|148992507|ref|ZP_01822202.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|149004045|ref|ZP_01828851.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|149021705|ref|ZP_01835736.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
 gi|147757946|gb|EDK64954.1| pantothenate kinase [Streptococcus pneumoniae SP14-BS69]
 gi|147921903|gb|EDK73029.1| pantothenate kinase [Streptococcus pneumoniae SP3-BS71]
 gi|147928824|gb|EDK79837.1| pantothenate kinase [Streptococcus pneumoniae SP9-BS68]
 gi|147930166|gb|EDK81152.1| pantothenate kinase [Streptococcus pneumoniae SP23-BS72]
          Length = 196

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|191167391|ref|ZP_03029206.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           B7A]
 gi|256025289|ref|ZP_05439154.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia sp.
           4_1_40B]
 gi|190902531|gb|EDV62265.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           B7A]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|299065279|emb|CBJ36447.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum CMR15]
          Length = 374

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 75/194 (38%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV +A                 D+GTGTG +   L K   
Sbjct: 167 GARIHPHYGVFSPVRGEYVDLVANA--------PLPSQALAFDIGTGTGVLAAVLAKRGV 218

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D   +AL  A  N    G+  + + +++D F   EG   +IV NPP++ +   
Sbjct: 219 K-RVVGTDQDARALACAHENLTRLGLQSQVEVIEADLFP--EGRAPLIVCNPPWLPARPS 275

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R   DG++ HL     G   +    E  G   + 
Sbjct: 276 SPIERAVYDPDSRM-----------LRGFLDGLAAHLEPGGEGWLILSDFAEHLGLRTRD 324

Query: 234 DVVRIFESRKLFLV 247
            ++ + E+  L +V
Sbjct: 325 ALLAMIEAAGLQVV 338


>gi|332970739|gb|EGK09719.1| methyltransferase domain protein [Desmospora sp. 8437]
          Length = 204

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 33/188 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R  + +  F  +      VD      +   E  +   ILDLG G G V +A    +P  +
Sbjct: 31  RFLVDAGVFSKKG-----VDFGSRLLIDTAELPERGEILDLGCGYGPVGIACSVFAPHCR 85

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
              VD++ +ALE+A+ NA  NGVS   + L+SD  S++ +  FD +++NPP         
Sbjct: 86  VTMVDLNRRALELARRNAELNGVSSHVEILESDGLSALGKRRFDSVLTNPPIRTGKKT-- 143

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFES 241
                                  YR +       L   G   V I   Q      +  E+
Sbjct: 144 ----------------------VYR-LFGEAYEQLVPGGALWVVIRKQQGGASAKKELET 180

Query: 242 RKLFLVNA 249
           R    V  
Sbjct: 181 R-FGEVEI 187


>gi|332346417|gb|AEE59751.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           UMNK88]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F       L  D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVF---SRDSL--DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|268318934|ref|YP_003292590.1| hypothetical protein FI9785_440 [Lactobacillus johnsonii FI9785]
 gi|262397309|emb|CAX66323.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
          Length = 203

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKES 119
           +++ T  +  F     ++L VD      +  ++  D  +  ILD+GTG G + L   K  
Sbjct: 30  DLKFTTDAGVF-----SKLRVDYGSGVLIKAMKNVDFPKDGILDVGTGYGPMGLFAAKFW 84

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD++ +AL++AK NA  N + +  +  QSD +  V   + +I++NPP      
Sbjct: 85  PDQEVDMVDVNERALDLAKRNAQFNRI-DNVNIYQSDIYEQVNKKYGLIITNPPIRA--- 140

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G      I      HL ++G+  V I   Q      ++
Sbjct: 141 ----------------------GKKVVDQILADAKDHLVENGVLLVVIQKKQGAPSAKKL 178

Query: 239 FES 241
              
Sbjct: 179 MTK 181


>gi|224024952|ref|ZP_03643318.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM
           18228]
 gi|224018188|gb|EEF76186.1| hypothetical protein BACCOPRO_01683 [Bacteroides coprophilus DSM
           18228]
          Length = 237

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 15/159 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             E  +  R+LDLGTGTG + L +  +       G+D+   A+E A  N   +  ++R  
Sbjct: 32  WAELPEEGRVLDLGTGTGLIAL-MAAQRCQAPVCGIDVDEAAVEQALENVAASPWADRIR 90

Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYR 207
             + D    ++  +G+FD IVSNPPY    ++                     DGL    
Sbjct: 91  IWKQDVREMWAETDGVFDAIVSNPPYFTEKVLCPDRQRNAARH---------TDGLDF-D 140

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            + + V R L + G+ SV +  +   D + +    +L+L
Sbjct: 141 ELLEAVCRLLTERGVFSVVLPSDAGRDFIGLALRHRLYL 179


>gi|261401204|ref|ZP_05987329.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970]
 gi|269208782|gb|EEZ75237.1| methyltransferase domain protein [Neisseria lactamica ATCC 23970]
          Length = 367

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +    F P     L         L +         LD+GTG+G +   L K+   
Sbjct: 160 GGRIYVPFGVFSPLRGEYL-------DLLAQAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + +A+  A++N    G+ ++ +  ++D F  +    D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM--RADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPDSA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|329767189|ref|ZP_08258716.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
 gi|328836856|gb|EGF86503.1| hypothetical protein HMPREF0428_00413 [Gemella haemolysans M341]
          Length = 198

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 73/190 (38%), Gaps = 31/190 (16%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESP 120
           N++    +  F     ++  VD      L     +++  ++ D+G G G + + L K+ P
Sbjct: 26  NLKFYTDNGVF-----SKESVDFGTKTMLESFSTEKENAKVADIGCGYGVISIFLAKKYP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            FK   VD++ + LE++K N   N ++   + L+S  F +VEG FD++++NPP       
Sbjct: 81  TFKFTMVDVNNRVLELSKKNIELNKINNEVEVLESSSFDNVEGNFDIVLTNPPIRA---- 136

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G      I      HLN  G   V I   Q +   +   
Sbjct: 137 ---------------------GKKIVHKIMTDSYEHLNASGELWVVIQKKQGMASCKKLL 175

Query: 241 SRKLFLVNAF 250
                +V   
Sbjct: 176 EETFSMVEVV 185


>gi|170681708|ref|YP_001746825.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           SMS-3-5]
 gi|226712950|sp|B1LEH4|RSMC_ECOSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|170519426|gb|ACB17604.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           SMS-3-5]
          Length = 343

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|309378625|emb|CBX22803.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 367

 Score = 95.9 bits (238), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +    F P     L         L +         LD+GTG+G +   L K+   
Sbjct: 160 GGRIYVPFGVFSPLRGEYL-------DLLAQAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + +A+  A++N    G+ ++ +  ++D F  +    D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM--RADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AI--ESALYDPDSA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|91776075|ref|YP_545831.1| methyltransferase small [Methylobacillus flagellatus KT]
 gi|91710062|gb|ABE49990.1| methyltransferase small [Methylobacillus flagellatus KT]
          Length = 368

 Score = 95.9 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 96/269 (35%), Gaps = 50/269 (18%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR---------SLKHESIHRIL 55
           R + +   RV G+   ++  D D  +  R+   +  A  +          +    +  ++
Sbjct: 88  RQAQAQRARVLGMMLVEL--DQDYSIALRRAPDVREACQQAYGDAVQPSLISLRELQGVI 145

Query: 56  G---WRDFY------NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           G   WR           R+      F P R E   LV  A           D +   D+G
Sbjct: 146 GAYEWRKKGVEVAALGARIHPHYGVFSPVRGEYVDLVAQA--------PLPDKMLAFDIG 197

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+G +   L K     K +  D   +AL  A+ N    G+  + + L  + F    G  
Sbjct: 198 TGSGVLAAVLAKRGVQ-KVIATDQDARALACARENMQRLGLEAQVEVLSCNLFPP--GKA 254

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LC 223
            +IV NPP+I +       +E   +DP  +           +    GVS HL   G    
Sbjct: 255 PLIVCNPPWIPA--KANAPIEYAIYDPAST---------MLKGFLGGVSAHLTPGGEAWL 303

Query: 224 SV----EIGY-NQKVDVVRIFESRKLFLV 247
            +    E      +  ++R+FE   L ++
Sbjct: 304 ILSDIAEHLELRTREVLLRMFEESGLKVI 332


>gi|324112056|gb|EGC06034.1| methyltransferase small domain-containing protein [Escherichia
           fergusonii B253]
          Length = 343

 Score = 95.9 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|307704613|ref|ZP_07641515.1| methyltransferase domain protein [Streptococcus mitis SK597]
 gi|307621815|gb|EFO00850.1| methyltransferase domain protein [Streptococcus mitis SK597]
          Length = 193

 Score = 95.9 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  +E      +LD+G G G + L
Sbjct: 20  LLGEK----MTFLTDAGVF-----SKKMIDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 71  SLAKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGTFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|303243574|ref|ZP_07329916.1| methyltransferase small [Methanothermococcus okinawensis IH1]
 gi|302486135|gb|EFL49057.1| methyltransferase small [Methanothermococcus okinawensis IH1]
          Length = 201

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 71/216 (32%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  IL  +    +     +  F P+      +D      +  ++      +LD+G G G 
Sbjct: 17  IEGILRNKK---LTFKTDTGIFSPKK-----IDKGTKILVEALKLNKNYDVLDIGCGYGV 68

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGL-FDV 167
           V +A+  E         DI+ +A+ +AK N   N     +    +Q D + +V+   +D+
Sbjct: 69  VGIAIADEVN--SITMTDINKRAVRLAKENIKLNDTSKDKNIRVVQGDLYENVKDKNYDM 126

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I+SNPP                            G      I       L  +G   + I
Sbjct: 127 IISNPPI-------------------------KAGKETIHRIIKEGKELLKDNGSIWLVI 161

Query: 228 GYNQKV-DVVRIFES-RKLFLVNAFKDYGGNDRVLL 261
                   + +  E       V   K   G  RVL+
Sbjct: 162 QTKHGAKSLTKFMEEVFGNVEVVTIK---GGYRVLM 194


>gi|193204212|ref|NP_494209.2| hypothetical protein C33C12.9 [Caenorhabditis elegans]
 gi|163644445|gb|AAB66061.3| Hypothetical protein C33C12.9 [Caenorhabditis elegans]
          Length = 221

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 14/161 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGV 127
            D +EP  +T LL+D A+   +  I  RD   +L++G G+G V   + +        V  
Sbjct: 16  HDVYEPAEDTFLLID-AIEKDIKEIRSRDPKLVLEIGCGSGVVSTFVNQALGGNVTSVAT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           D++  AL++    A  N    + D +++D F+ +E   G  DV++ NPPY+ +       
Sbjct: 75  DLNPHALDVTLETAKLN--DIKIDVVRTDLFAGLENLLGKVDVLLFNPPYVPTDEEPKSN 132

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +E       ++  GG  G S    +   V   L+  G+  +
Sbjct: 133 IE-------LTYAGGRTGRSTLDRLLPRVPELLSPRGVFYL 166


>gi|170721831|ref|YP_001749519.1| methyltransferase small [Pseudomonas putida W619]
 gi|169759834|gb|ACA73150.1| methyltransferase small [Pseudomonas putida W619]
          Length = 317

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L R   R + R +D+G G+G   L + + +   +   VDI+  AL     NA  
Sbjct: 125 QVIHDHLQRSPVR-IERAVDIGCGSGVGALLVARAAQHAQVCAVDINPVALRYTAINAAL 183

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            GVS       SD  + + G FD+IV+NPPY+    +D      R         GG  G 
Sbjct: 184 AGVS-NVSIAHSDLLAGISGNFDLIVANPPYM----LDDGQRTYRH-------GGGTLGA 231

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
                I +     L+  G   +  G
Sbjct: 232 DLSLRIIEQARERLSPGGSLLLYTG 256


>gi|333010461|gb|EGK29894.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           VA-6]
          Length = 343

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGCFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|195437336|ref|XP_002066596.1| GK19357 [Drosophila willistoni]
 gi|194162681|gb|EDW77582.1| GK19357 [Drosophila willistoni]
          Length = 217

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 81/184 (44%), Gaps = 8/184 (4%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDI 129
            +EP  ++ LL+D AL   L  +E++     +++G+G+G +  AL K+       +  DI
Sbjct: 17  VYEPAEDSFLLLD-ALEKDLQFLEEQQPHLCVEIGSGSGVIITALSKKFSNSALCLATDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188
           + +A +  KS A+ N    + + L  +    +     D++V NPPY+ +   +     + 
Sbjct: 76  NPRACKATKSTALKNHA--QVECLNCNLTQPLRKRSVDLLVFNPPYVVTSDEEMQLQNIA 133

Query: 189 DFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKLF 245
             +  +  S  GG DG      +   +   L+ +G+   + +  N+  +++      +  
Sbjct: 134 ATERNLVYSWAGGQDGRRVTDILLKQLDDILSPNGVLYLLLLRENKPEEIINYLTKLRFK 193

Query: 246 LVNA 249
            V  
Sbjct: 194 AVKF 197


>gi|108801815|ref|YP_642012.1| putative methylase [Mycobacterium sp. MCS]
 gi|119870968|ref|YP_940920.1| putative methylase [Mycobacterium sp. KMS]
 gi|108772234|gb|ABG10956.1| Putative methylase [Mycobacterium sp. MCS]
 gi|119697057|gb|ABL94130.1| putative methylase [Mycobacterium sp. KMS]
          Length = 231

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             + P+ +++LLVD      L         R +DL TG+G V +    +         DI
Sbjct: 17  GVYAPQEDSQLLVDIMEKTGLAV-----GRRAVDLCTGSGVVAVNAALQGA-SSVTAFDI 70

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVR 188
             +A+  A+ NA   G     D     W  +VE   FD++  NPPY+             
Sbjct: 71  CPRAVRCARGNA--LGAGVDVDVHLGSWARAVEFDPFDLVTCNPPYVPHAPEADREPVPS 128

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSR 215
              P  + D G DG      + + V  
Sbjct: 129 SVGPARAWDAGYDGRMILDPLCEAVPD 155


>gi|150005674|ref|YP_001300418.1| hypothetical protein BVU_3164 [Bacteroides vulgatus ATCC 8482]
 gi|254884107|ref|ZP_05256817.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776584|ref|ZP_06742054.1| methyltransferase small domain protein [Bacteroides vulgatus PC510]
 gi|319640872|ref|ZP_07995583.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A]
 gi|262827953|sp|A6L532|TRMN6_BACV8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|149934098|gb|ABR40796.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254836900|gb|EET17209.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449572|gb|EFG18102.1| methyltransferase small domain protein [Bacteroides vulgatus PC510]
 gi|317387509|gb|EFV68377.1| hypothetical protein HMPREF9011_01180 [Bacteroides sp. 3_1_40A]
          Length = 234

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      ILD+GTGTG + L + +     +   VDI   A+E A+ N   +   +R +
Sbjct: 32  WADVVSARNILDIGTGTGLISLMMAQRC-NARIRAVDIDADAVEQARGNVAASPWQDRIE 90

Query: 152 T-LQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             LQ     + E LFDVIVSNPPY    +        +             D L     +
Sbjct: 91  VELQDICHFTSETLFDVIVSNPPYFTDSLKCPGKQRNIARH---------TDFLDF-DKL 140

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           A   +R L+ +G+ SV I  + K   +       L L
Sbjct: 141 AGSAARLLHPEGVFSVIIPADGKESFLMAATRYGLHL 177


>gi|55820852|ref|YP_139294.1| hypothetical protein stu0800 [Streptococcus thermophilus LMG 18311]
 gi|55822767|ref|YP_141208.1| hypothetical protein str0800 [Streptococcus thermophilus CNRZ1066]
 gi|55736837|gb|AAV60479.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55738752|gb|AAV62393.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 213

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 67/190 (35%), Gaps = 33/190 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +  F  +      VD      L  ++      +LD+G G G + ++L K    
Sbjct: 44  GFHFYTDAGVFSKKK-----VDYGSQVLLNALDLERGKNLLDVGCGYGPLGISLAK-VQG 97

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   +DI+ +A+++AK NA  NGV       QS+ + +V   FD I+SNPP        
Sbjct: 98  VQSTMIDINSRAIDLAKKNAERNGVVAHI--FQSNIYENVSEKFDYIISNPPIRA----- 150

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                               G      I +G   HLN+ G  ++ I   Q     ++   
Sbjct: 151 --------------------GKKVVHEIIEGAFDHLNQGGSLTIVIQKKQGAPSAKVKME 190

Query: 242 RKLFLVNAFK 251
                    +
Sbjct: 191 NVFGNAEIIR 200


>gi|322388055|ref|ZP_08061661.1| methyltransferase domain protein [Streptococcus infantis ATCC
           700779]
 gi|321141076|gb|EFX36575.1| methyltransferase domain protein [Streptococcus infantis ATCC
           700779]
          Length = 196

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  ++     +ILD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKMIDFGSQLLLRCLDVEKDEKILDVGCGYGPIGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NAV N V  +    QS+ +  VEG FD ++SNPP
Sbjct: 74  SLVKAY-GAQATMVDINNRALDLAQQNAVKNNV--QATIFQSNIYEQVEGQFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +    +L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSIDYLKDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKNKMEEVFGNCEVVKKDKGYYILRSVK 195


>gi|300702626|ref|YP_003744226.1| methyltransferase [Ralstonia solanacearum CFBP2957]
 gi|299070287|emb|CBJ41579.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum CFBP2957]
          Length = 390

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV +A                 D+GTGTG +   L K   
Sbjct: 183 GARIHPHYGVFSPVRGEYVDLVANA--------PLPSQALAFDIGTGTGVLAAVLAKRGV 234

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D   +AL  A+ N    G+  + + + +D F   EG   +IV NPP++ +   
Sbjct: 235 K-RVVGTDQDARALACARENLARLGLQSQVEVIDADLFP--EGRAPLIVCNPPWLPARPS 291

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R   DG++ HL  +  G   +    E  G   + 
Sbjct: 292 SPIERAVYDPDSRM-----------LRGFLDGLAAHLEPNGEGWLILSDFAEHLGLRTRE 340

Query: 234 DVVRIFESRKLFLV 247
            ++ + ++  L +V
Sbjct: 341 ALLAMIDAAGLRVV 354


>gi|229542213|ref|ZP_04431273.1| methyltransferase small [Bacillus coagulans 36D1]
 gi|229326633|gb|EEN92308.1| methyltransferase small [Bacillus coagulans 36D1]
          Length = 200

 Score = 95.5 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 72/194 (37%), Gaps = 42/194 (21%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VR 100
            KH+ I          +   TL   TF  + +  +     VD      L  +   +    
Sbjct: 12  AKHQPI----------DFTFTLRGHTFHFQTDQGVFSKKEVDFGSRVLLDLVTMPETEGP 61

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + LAL    P      VDI+ +A+E+A+ NA  N +S      +S+ F +
Sbjct: 62  VLDMGCGYGPIGLALATSFPGRHVHMVDINTRAVELAEKNAARNHIS-NVSIYESNLFEN 120

Query: 161 VE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V+ G F +I +NPP                            G      I +   ++L K
Sbjct: 121 VKSGPFALIATNPPIRA-------------------------GKQIVHRIFEESYQYLAK 155

Query: 220 DGLCSVEIGYNQKV 233
           +G   V I   Q  
Sbjct: 156 NGELWVVIRKKQGA 169


>gi|187926843|ref|YP_001893188.1| methyltransferase small [Ralstonia pickettii 12J]
 gi|241665172|ref|YP_002983531.1| methyltransferase small [Ralstonia pickettii 12D]
 gi|187728597|gb|ACD29761.1| methyltransferase small [Ralstonia pickettii 12J]
 gi|240867199|gb|ACS64859.1| methyltransferase small [Ralstonia pickettii 12D]
          Length = 380

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 86/231 (37%), Gaps = 36/231 (15%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVD 83
           D  SV+  R+   L  A     K   I  +         R+      F P R E   LV 
Sbjct: 142 DAASVVSLRELLGLIGAHEWRKKGVEIPAL------GGGRIHPHYGVFSPVRGEYIDLVA 195

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A                 D+GTGTG +   L K       V  D   +AL  A+ N   
Sbjct: 196 NA--------PLPSTALAFDIGTGTGVLAAVLAKRGVK-HIVATDQDPRALACARDNLAH 246

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+  + + +++D F   EG   +IV NPP++ +     +   V D D R+         
Sbjct: 247 LGLQSQVEVIEADLFP--EGRAPLIVCNPPWLPARPSSPIERAVYDPDNRM--------- 295

Query: 204 SHYRTIADGVSRHLNK--DGLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              R   DG++ HL    +G   +    E  G   +  ++ + E+  L +V
Sbjct: 296 --LRGFLDGLAAHLEPAGEGWLILSDFAEHLGLRTRDALMAMIEAAGLQVV 344


>gi|323975871|gb|EGB70967.1| methyltransferase small domain-containing protein [Escherichia coli
           TW10509]
          Length = 343

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPF------- 271

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                    +      G    L   +T+  G  RHLN  G  
Sbjct: 272 --------HE------GMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|303240941|ref|ZP_07327452.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
 gi|302591527|gb|EFL61264.1| methyltransferase small [Acetivibrio cellulolyticus CD2]
          Length = 197

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 64/172 (37%), Gaps = 32/172 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F  +      VD      +  I +     ILD+G G G + ++L +  P  
Sbjct: 27  LEFITDAGVFSKKK-----VDFGSDLLINSIPQI-TGEILDIGCGYGVIGISLSRLFPSA 80

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +A+++   N   N  +     LQSD F +V G+FDVIVSNPP         
Sbjct: 81  KVTMIDINERAVDLTTRNIKLNH-ANNAGALQSDGFINVTGMFDVIVSNPPI-------- 131

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                              G      I +    +LN +G   + I   Q   
Sbjct: 132 -----------------RTGKKVIYPIFEQSINYLNANGSIYIVIQKKQGAK 166


>gi|218551620|ref|YP_002385412.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
           ATCC 35469]
 gi|226712954|sp|B7LNK6|RSMC_ESCF3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218359162|emb|CAQ91825.1| 16S RNA m2G1207 methylase [Escherichia fergusonii ATCC 35469]
          Length = 343

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|156551603|ref|XP_001602665.1| PREDICTED: similar to ENSANGP00000004037 [Nasonia vitripennis]
          Length = 215

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---SPFFKGV 125
              +EP  ++ L++D AL   L + E       L++G G+G V  AL        F   +
Sbjct: 14  ESVYEPSEDSFLVID-ALEMDLQQFESSKPAMCLEIGIGSGVVITALAMALQKYCFSYFL 72

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCL 183
           G+DI+ +A ++ +     N V    +T+Q D  SS+     FD+I+ NPPY+ +  ++ L
Sbjct: 73  GIDINPQACKVTRKTCAINKVD--IETVQMDLLSSMCRKNIFDIIIFNPPYVVTEPLEVL 130

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESR 242
                      +  GG  G      +   + + L+++GL  +  I  N+  D++++FES 
Sbjct: 131 DDRFIS----KTWAGGHKGRQVMDRLFPLIPQLLSENGLFYLLVIKENEPHDIIQLFESL 186

Query: 243 K 243
            
Sbjct: 187 N 187


>gi|288803322|ref|ZP_06408755.1| methyltransferase [Prevotella melaninogenica D18]
 gi|288334142|gb|EFC72584.1| methyltransferase [Prevotella melaninogenica D18]
          Length = 236

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 16/161 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GTGTG + L + +     +   ++I   ALE A  N   +  ++R + L S
Sbjct: 31  KGGTRILDIGTGTGLIALMMAQRFSIAQIDAIEIDKGALEDAHLNVSASPFNDRINILNS 90

Query: 156 DWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                +       EG++D IV NPPY  + + + L           +     D LSH + 
Sbjct: 91  SLQDYIPCSETQEEGIYDAIVCNPPYFINSLKNPLQQ--------RTTARHTDTLSH-QE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +     R L  +G  SV I YN K  +        L ++  
Sbjct: 142 LIYHSKRLLKANGTLSVIIPYNNKDILEAEAIFNGLSILKI 182


>gi|171319068|ref|ZP_02908192.1| methyltransferase small [Burkholderia ambifaria MEX-5]
 gi|171095707|gb|EDT40663.1| methyltransferase small [Burkholderia ambifaria MEX-5]
          Length = 377

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RIVATDQDPRALACARENIARLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 ADRVDVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLADHLEPGGEGWLIL 313


>gi|24115600|ref|NP_710110.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
           str. 301]
 gi|30065609|ref|NP_839780.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 2a
           str. 2457T]
 gi|81837976|sp|Q820Z6|RSMC_SHIFL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|24054937|gb|AAN45817.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30043873|gb|AAP19592.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|281603708|gb|ADA76692.1| RRNA (Guanine-N(2)-)-methyltransferase [Shigella flexneri 2002017]
 gi|313646274|gb|EFS10736.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           2a str. 2457T]
 gi|332748881|gb|EGJ79305.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           4343-70]
 gi|332749133|gb|EGJ79556.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-671]
 gi|332749660|gb|EGJ80076.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           2747-71]
 gi|332768755|gb|EGJ98934.1| 16S rRNA methyltransferase [Shigella flexneri 2930-71]
 gi|333009463|gb|EGK28919.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-218]
 gi|333022399|gb|EGK41637.1| ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           K-304]
          Length = 343

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGCFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|325499880|gb|EGC97739.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia fergusonii
           ECD227]
          Length = 343

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGIEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|328472044|gb|EGF42921.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio parahaemolyticus
           10329]
          Length = 239

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 57/160 (35%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   
Sbjct: 33  MLGAWMESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWH 92

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D  S S    F  IV NPPY  +                 +     D L H 
Sbjct: 93  DRLSVKHTDVLSFSPPQRFQRIVCNPPYFNTGEQAKQSQ--------RATARHTDSLRH- 143

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +     + L+ +G  S  +   +    + +  ++   L
Sbjct: 144 DALLKCCYQLLDAEGKASFVLPITEGELFIELALTQGWAL 183


>gi|330878207|gb|EGH12356.1| hypothetical protein PSYMP_20644 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 301

 Score = 95.5 bits (237), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 56/229 (24%), Positives = 82/229 (35%), Gaps = 34/229 (14%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR------ 64
           L  V G S   +I +    L + Q       + RS        +     F ++       
Sbjct: 35  LRDVFGWSR--LIPETMLPLAEAQGLLEAGILERSEDG-----LKSRVRFSSLDDLLLMH 87

Query: 65  ---LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               TL  D+    P+T     S       +     + R  D+G GTGA  L +    P 
Sbjct: 88  SAFPTLDEDSVFFGPDTYRFAQSINRHL--QSTSHPIKRAADIGCGTGAGALLIAVARPD 145

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VDI+ KAL  A++NAV  G+    +   SD  S + G FD+IV+NPPY++     
Sbjct: 146 AQVYAVDINPKALHFAQANAVVAGLQ-NMECCHSDILSGLTGNFDLIVANPPYMKDAK-- 202

Query: 182 CLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                      R +   G D L       I       L   G   +  G
Sbjct: 203 -----------RRAYRHGGDALGADLSVRIVRESLDRLTPGGSLVLYTG 240


>gi|42518514|ref|NP_964444.1| hypothetical protein LJ0419 [Lactobacillus johnsonii NCC 533]
 gi|41582799|gb|AAS08410.1| hypothetical protein LJ_0419 [Lactobacillus johnsonii NCC 533]
 gi|329666784|gb|AEB92732.1| putative RNA methylase [Lactobacillus johnsonii DPC 6026]
          Length = 203

 Score = 95.2 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKES 119
           +++ T  +  F     ++L VD      +  ++  D  +  ILD+GTG G + L   K  
Sbjct: 30  DLKFTTDAGVF-----SKLRVDYGSGVLIKAMKNVDFPKDGILDVGTGYGPMGLFAAKFW 84

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD++ +AL++AK NA  N + +  +  QSD +  V+  + +I++NPP      
Sbjct: 85  PDQEVDMVDVNERALDLAKRNAQFNRI-DNVNIYQSDIYEQVDKKYGLIITNPPIRA--- 140

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G      I      HL + G+  V I   Q      ++
Sbjct: 141 ----------------------GKKVVDQILADAKDHLVEKGVLLVVIQKKQGAPSAKKL 178

Query: 239 FES 241
              
Sbjct: 179 MTK 181


>gi|327405947|ref|YP_004346785.1| methyltransferase small [Fluviicola taffensis DSM 16823]
 gi|327321455|gb|AEA45947.1| methyltransferase small [Fluviicola taffensis DSM 16823]
          Length = 233

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  R+LD+GTGTG + L   +  PF + +G++IS +A+  A+ NA  N    +   +  
Sbjct: 34  ENPKRLLDIGTGTGVLALMCAQRFPFQEIIGLEISEEAIIDAQINAQNNPFDTKITIVNQ 93

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                  +  FD I+SNPP+ E+   +    +        SL    + LS    +   ++
Sbjct: 94  AIQDYKPKEKFDAIISNPPFFENSSKNPNDQK--------SLARHTESLSFSE-LLQSIT 144

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           R L  +G   + I +    +++++  + +LF+ +      G  
Sbjct: 145 RLLTAEGKAWIIIPFESTENIIQLANANELFIADLIT-LFGKP 186


>gi|322376393|ref|ZP_08050886.1| methyltransferase domain protein [Streptococcus sp. M334]
 gi|321282200|gb|EFX59207.1| methyltransferase domain protein [Streptococcus sp. M334]
          Length = 196

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  +E      +LD+G G G + L
Sbjct: 23  LLGEK----MTFLTDAGVF-----SKKMIDFGSQLLLKCLEVNQGETVLDVGCGYGTLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGKFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEIVKKDKGYYILRSVK 195


>gi|265753718|ref|ZP_06089073.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235432|gb|EEZ20956.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 234

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            ++      ILD+GTGTG + L + +     +   VDI   A+E A+ N   +   +R +
Sbjct: 32  WVDVVSARNILDVGTGTGLISLIMAQRC-NAQIRAVDIDADAVEQARGNVAASPWQDRIE 90

Query: 152 T-LQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             LQ     + E LFDVIVSNPPY    +        +             D L     +
Sbjct: 91  VELQDICHFTSETLFDVIVSNPPYFTDSLKCPERQRNIARH---------TDLLDF-DKL 140

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           A+  +R L+ +G+ SV I  + K   +       L L
Sbjct: 141 AESAARLLHSEGVFSVIIPADGKESFLMAATRYGLHL 177


>gi|237807744|ref|YP_002892184.1| methyltransferase small [Tolumonas auensis DSM 9187]
 gi|237500005|gb|ACQ92598.1| methyltransferase small [Tolumonas auensis DSM 9187]
          Length = 265

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 10/159 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSER 149
                R   RILD+GTGTG + L L + +    +   V++   A++ A+ N   +   ER
Sbjct: 59  SWTPVRGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRER 118

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              ++ D  +     +D+I+SNPPY        L    R             G      +
Sbjct: 119 IRVIRHDIRTFQAPHYDLIISNPPYFVHG--QTLPDAARQLARHT-------GELDQTAL 169

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +  +R L   G  ++ +   +   +V +  +   +L  
Sbjct: 170 LESAARLLTPFGKLALVLPVEEGEQLVALATAGGWYLQR 208


>gi|313668347|ref|YP_004048631.1| hypothetical protein NLA_10380 [Neisseria lactamica ST-640]
 gi|313005809|emb|CBN87263.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 331

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +    F P     L         L +         LD+GTG+G +   L K+   
Sbjct: 124 GGRIYVPFGVFSPLRGEYL-------DLLAQAPSTGFQTALDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + +A+  A++N    G+ ++ +  ++D F  +    D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPRAVACARANIARLGLEKQVEIRETDMFPDM--RADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 234 AV--ESALYDPDSA---------MLAAFLRDAPKHLNPDGEIRLII 268


>gi|295098508|emb|CBK87598.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 342

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F       L  D+     L  +      ++LD+G G G +   L   SP 
Sbjct: 166 GLTIKTLPGVF---SRDAL--DTGSKLLLSTLTPHTKGKVLDVGCGAGVLSTVLASHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG+    D   S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLTLCDVSAPAVEASRATLAANGIEG--DVFASNVFSDVTGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G +RHLN  G  
Sbjct: 273 ---------------DGMETSLEAAQTLIRGATRHLNSGGEL 299


>gi|332669378|ref|YP_004452386.1| methyltransferase small [Cellulomonas fimi ATCC 484]
 gi|332338416|gb|AEE44999.1| methyltransferase small [Cellulomonas fimi ATCC 484]
          Length = 512

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L V  A         +    R+LDLGTG G   L   + +     VG DIS +AL
Sbjct: 142 RTDHVLGVGGASTTLAQVTVRSPRRRVLDLGTGCGVQALHATRHAHA--VVGTDISARAL 199

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ NA   GV++R           V G  FD++VSNPP++    +   G +V  ++ R
Sbjct: 200 AFAQLNAALAGVADRTTWRLGSMLEPVAGERFDLVVSNPPFV----ITPRGADVPAYEYR 255

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              DGG  G +  R + +GV   L   G+  +
Sbjct: 256 ---DGGRAGDAIVRELVEGVGAVLEPGGVAQL 284


>gi|160900635|ref|YP_001566217.1| methyltransferase small [Delftia acidovorans SPH-1]
 gi|160366219|gb|ABX37832.1| methyltransferase small [Delftia acidovorans SPH-1]
          Length = 403

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 16/164 (9%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
             ++        P     +D      LP   ++    + D+GTGTG +  ALL      +
Sbjct: 191 EFSIHPHYGVFSPVRGEYLDLVAQAPLPAAAQQADAAVWDIGTGTGVLS-ALLLHRGVRQ 249

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            V  D+S +AL  A+ N    G+++R    ++D F   EG   ++V NPP++       L
Sbjct: 250 VVATDLSDRALACAQDNLQRLGLAQRVSLRKADLFP--EGRAALVVCNPPWLPGKASSLL 307

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
              V D           +G    R   +G++ HL     G   +
Sbjct: 308 EQAVYD-----------EGSRMLRGFVEGLAAHLLPGGEGWLIL 340


>gi|315616262|gb|EFU96881.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           3431]
          Length = 343

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 34/171 (19%)

Query: 59  DFYN------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            F+       + +      F  R      +D      L  +      ++LD+G G G + 
Sbjct: 157 KFWGEYSVDDLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLS 211

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNP
Sbjct: 212 VAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNP 269

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+                      DG    L   +T+  G  RHLN  G  
Sbjct: 270 PFH---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|300689993|ref|YP_003750988.1| methyltransferase, methylase of polypeptide chain release factors
           [Ralstonia solanacearum PSI07]
 gi|299077053|emb|CBJ49669.1| putative methyltransferase, Methylase of polypeptide chain release
           factors [Ralstonia solanacearum PSI07]
          Length = 420

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A                 D+GTGTG +   L K   
Sbjct: 213 GARIHPHYGVFSPVRGEYVDLVAKA--------PLPSQALAFDIGTGTGVLAAVLAKRGV 264

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D   +AL  A+ N    G+  + + +++D F   EG   +IV NPP++ +   
Sbjct: 265 K-RVVGTDQDARALACARENLTRLGLQSQVEVIEADLFP--EGRAPLIVCNPPWLPARPS 321

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK--DGLCSV----EI-GYNQKV 233
             +   V D D R+            R   DG++ HL    +G   +    E  G   + 
Sbjct: 322 SPIERAVYDPDSRM-----------LRGFLDGLAAHLEPSGEGWLILSDFAEHLGLRTRD 370

Query: 234 DVVRIFESRKLFLV 247
            ++ + E+  L +V
Sbjct: 371 ALLAMIEAAGLQVV 384


>gi|222152110|ref|YP_002561270.1| hypothetical protein MCCL_1867 [Macrococcus caseolyticus JCSC5402]
 gi|222121239|dbj|BAH18574.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 198

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 42/210 (20%)

Query: 47  KHES-IHRILGWRDFYNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRIL 102
            HES I  I+G    ++++LT  S  F        + LLV + L  + P       +R+L
Sbjct: 13  SHESTISFIMGR---HDLKLTTDSGVFSKGGVDFGSNLLVKTFLEDAHP-------IRVL 62

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+G G G + L + K  P      VD++ +AL +A+ NA+ N V +      SD  + V 
Sbjct: 63  DVGCGYGTMGLMIAKHFPDCTLHMVDVNERALNLARKNAMHNNVKD-VHIYISDGLNEVT 121

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD +++NPP                            G      I       L   G 
Sbjct: 122 EFFDAVITNPPIRA-------------------------GKDVVHRILSDSYNILEHQGA 156

Query: 223 CSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
             V I   Q      +  +      V   K
Sbjct: 157 LYVVIQKKQGMPSAKKKMDEV-FGNVTVLK 185


>gi|296101149|ref|YP_003611295.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295055608|gb|ADF60346.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 342

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G +   L   SP 
Sbjct: 166 GLTIKTLPGVFS-RDG----LDVGSKLLLSTLTPHTKGKVLDVGCGAGVLATVLASHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG     D   S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFSDVTGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGIETSLEAAQTLIRGAVRHLNSGGEL 299


>gi|110808160|ref|YP_691680.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella flexneri 5
           str. 8401]
 gi|122956950|sp|Q0SX40|RSMC_SHIF8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110617708|gb|ABF06375.1| putative enzyme [Shigella flexneri 5 str. 8401]
          Length = 343

 Score = 95.2 bits (236), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVES--EVFASNVFSEVKGCFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|329770374|ref|ZP_08261756.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
 gi|328836497|gb|EGF86157.1| hypothetical protein HMPREF0433_01520 [Gemella sanguinis M325]
          Length = 198

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 31/189 (16%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++    +  F     ++  VD      L     +++   + D+G G G + + L K++P 
Sbjct: 27  LQFYTDNGVF-----SKENVDFGTKVLLENFYSEKEYADVADVGCGYGVISIFLAKKNPN 81

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           +    +D++ ++LE++K N   N +  + + ++S  F +V+G FD++++NPP        
Sbjct: 82  YNFTMIDVNNRSLELSKKNIELNKIDNKIEIIESSSFDNVKGTFDIVLTNPPIRA----- 136

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                               G      I      HL  DG   V I   Q +   +    
Sbjct: 137 --------------------GKQIVHKIMTDSFEHLKSDGELWVVIQKKQGMASCKKLLE 176

Query: 242 RKLFLVNAF 250
                V   
Sbjct: 177 NLFNSVEVI 185


>gi|323351703|ref|ZP_08087357.1| methyltransferase domain protein [Streptococcus sanguinis VMC66]
 gi|322122189|gb|EFX93915.1| methyltransferase domain protein [Streptococcus sanguinis VMC66]
          Length = 195

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAYGVA-ATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  IF       + +  +++ + K
Sbjct: 166 PSAKSKMEAIFGNCEIVKKDKGYYILRSEK 195


>gi|331650856|ref|ZP_08351884.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M718]
 gi|331051310|gb|EGI23359.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M718]
          Length = 343

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTNLDAAQTLIRGAVRHLNSGGEL 299


>gi|312794827|ref|YP_004027749.1| methyltransferase [Burkholderia rhizoxinica HKI 454]
 gi|312166602|emb|CBW73605.1| Methyltransferase (EC 2.1.1.-) [Burkholderia rhizoxinica HKI 454]
          Length = 383

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   L+  A       +         D+GTGTG +  ALL    
Sbjct: 172 GARIHPHYGVFSPVRGEYLDLIAQA------PLPAGADALAFDIGTGTGVIA-ALLARRG 224

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D+  +AL+ A+ N    G+S + + +++D F  +     ++V NPP++ +   
Sbjct: 225 VRRVIATDVDSRALDCARENVARLGLSAQVEVVRADLF-PLSRRAPLVVCNPPWVPARPS 283

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R    G+  HL     G   +    E  G   + 
Sbjct: 284 ASIEHAVFDPDSRM-----------LRGFLAGLPAHLAPGGEGWLIMSDLAEHLGLRPRE 332

Query: 234 DVVRIFESRKLF 245
             + + ++  L 
Sbjct: 333 AFLAMIDAAGLQ 344


>gi|313110982|ref|ZP_07796822.1| putative methylase [Pseudomonas aeruginosa 39016]
 gi|310883324|gb|EFQ41918.1| putative methylase [Pseudomonas aeruginosa 39016]
          Length = 316

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|151567849|pdb|2PJD|A Chain A, Crystal Structure Of 16s Rrna Methyltransferase Rsmc
          Length = 343

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDXIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|172059488|ref|YP_001807140.1| methyltransferase small [Burkholderia ambifaria MC40-6]
 gi|171992005|gb|ACB62924.1| methyltransferase small [Burkholderia ambifaria MC40-6]
          Length = 377

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RIVATDQDPRALACARENIARLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 ADRVDVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLADHLEPGGEGWLIL 313


>gi|150387943|ref|YP_001317992.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
 gi|149947805|gb|ABR46333.1| methyltransferase small [Alkaliphilus metalliredigens QYMF]
          Length = 255

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 24/172 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++L  +   F         +D+ L  +   ++K    R++DLGTGTG + + L  +S  
Sbjct: 18  DLKLIQNPQWFCFG------IDAVLLANFVTLKKN--ARVVDLGTGTGIIPILLAGKSES 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I  +  E+A+ +   NG+  R D L  D   + +      FDV+ SNPPY+  
Sbjct: 70  SHVTGIEIQEEVAEMAQRSVKLNGLECRIDILPMDLKEAPQVLPVNSFDVVTSNPPYMHG 129

Query: 178 VIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +        +   + + +L            +    S+ L + G   +  
Sbjct: 130 QGLKNQEDKKTISRHEVKCNL----------EDVIRTASKLLKQHGKLFLIH 171


>gi|325186373|emb|CCA20878.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 219

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 17/190 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV----CLALL 116
           YN+      D +EP  ++ LL+D AL      +E       +++G GTG +       L 
Sbjct: 9   YNLP-KYCRDVYEPAEDSYLLLD-ALRKERSFLEILHPTICVEIGCGTGVIFTYLATLLH 66

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNP 172
           +       +  D++  A  +A   A  N +    D +++D    ++       DV++ NP
Sbjct: 67  RNGHDALFLATDVNPTATVVASQTAALNKIPF-VDVIRTDLLKCIDHRLEQSIDVLIFNP 125

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQ 231
           PY+ +        EV+      +  GG+ G      I   V   L+  G+  + +   N+
Sbjct: 126 PYVPTP-----SHEVKSHGIEAAWAGGVLGREVIDRILPRVKGLLSPSGVLYMIVLEENR 180

Query: 232 KVDVVRIFES 241
             +++RI +S
Sbjct: 181 PNEIMRILQS 190


>gi|49084994|gb|AAT51244.1| PA2179 [synthetic construct]
          Length = 317

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|260858545|ref|YP_003232436.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
           11368]
 gi|257757194|dbj|BAI28696.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O26:H11 str.
           11368]
 gi|323157742|gb|EFZ43847.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           EPECa14]
          Length = 343

 Score = 95.2 bits (236), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNNGGEL 299


>gi|325204216|gb|ADY99669.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240355]
          Length = 331

 Score = 95.2 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L           LD+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTALDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 281

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 282 FLDKAFAQAGLRVADVLK 299


>gi|311108357|ref|YP_003981210.1| methyltransferase [Achromobacter xylosoxidans A8]
 gi|310763046|gb|ADP18495.1| ribosomal protein L11 methyltransferase PrmA family protein
           [Achromobacter xylosoxidans A8]
          Length = 372

 Score = 95.2 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      +PR          D+GTGTG +   + +     + +
Sbjct: 167 RIHPHYGVFSPLRGEYVDLVARTPMPR-----GSVAFDIGTGTGVLAAVIARRGGK-RVI 220

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G+S++ +  ++D F   EG   +IV NPP++ +     +  
Sbjct: 221 ATDTDPRALACARENLERLGLSKQVEVEETDLFP--EGRVSLIVCNPPWLPARPSSPVEH 278

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V D D R+            R   +G++ HL  +  G   +    E  G   +  ++ +
Sbjct: 279 AVYDPDSRM-----------LRGFLNGLAAHLTPNGEGWLILSDLAEHLGLRSREALLEM 327

Query: 239 FESRKLFLVN 248
                L ++ 
Sbjct: 328 TSQAGLQVIE 337


>gi|323439811|gb|EGA97528.1| methyltransferase small subunit [Staphylococcus aureus O11]
          Length = 202

 Score = 95.2 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/246 (22%), Positives = 84/246 (34%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + K
Sbjct: 50  --------QTFLKTRPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNQKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|329297754|ref|ZP_08255090.1| 16S ribosomal RNA m2G1207 methyltransferase [Plautia stali
           symbiont]
          Length = 343

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +      F  R      +D      L  +      ++LD+G G+G +  AL + SP 
Sbjct: 166 DLTIHTLPGVFS-RDG----LDIGSDLLLSTLTPHTKGKVLDIGCGSGVLAAALAQHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+E +K+    NG+        S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLWLCDVHAAAIEASKATLAANGLEGEVFV--SNVFSDVSGRFDLIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L    T+  G  +HLN  G  
Sbjct: 273 ---------------DGLQTSLDAAHTLIRGAVKHLNSGGEL 299


>gi|15597375|ref|NP_250869.1| hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
 gi|218891868|ref|YP_002440735.1| putative methylase [Pseudomonas aeruginosa LESB58]
 gi|9948200|gb|AAG05567.1|AE004645_1 hypothetical protein PA2179 [Pseudomonas aeruginosa PAO1]
 gi|218772094|emb|CAW27873.1| putative methylase [Pseudomonas aeruginosa LESB58]
          Length = 316

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|83749844|ref|ZP_00946813.1| Methyltransferase [Ralstonia solanacearum UW551]
 gi|207744704|ref|YP_002261096.1| hypothetical protein 1177; methyltransferase small [Ralstonia
           solanacearum IPO1609]
 gi|83723481|gb|EAP70690.1| Methyltransferase [Ralstonia solanacearum UW551]
 gi|206596111|emb|CAQ63038.1| conserved hypothetical protein 1177; methyltransferase small
           [Ralstonia solanacearum IPO1609]
          Length = 342

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 26/188 (13%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +        P     VD      LP           D+GTGTG +   L K       VG
Sbjct: 138 IHPHYGVFSPIRGEYVDLVANAPLP-----SQALAFDIGTGTGVLAAVLAKRGVK-HVVG 191

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D   +AL  A+ N    G+  R + +++D F   EG   +IV NPP++ +     +   
Sbjct: 192 TDQDARALVCARENLARLGLQSRVEVIEADLFP--EGRAPLIVCNPPWLPARPSSPIERA 249

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIF 239
           V D D R+            R   DG++ HL  +  G   +    E  G   +  ++ + 
Sbjct: 250 VYDPDSRM-----------LRGFLDGLAAHLEPNGEGWLILSDFAEHLGLRTREALLAMI 298

Query: 240 ESRKLFLV 247
           ++  L +V
Sbjct: 299 DAAGLQVV 306


>gi|262831243|sp|C4LCN4|TRMN6_TOLAT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 10/159 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSER 149
                R   RILD+GTGTG + L L + +    +   V++   A++ A+ N   +   ER
Sbjct: 31  SWTPVRGAKRILDIGTGTGILALMLAQRTAQQVQIDAVELDKDAVKQAEENINASPWRER 90

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              ++ D  +     +D+I+SNPPY        L    R             G      +
Sbjct: 91  IRVIRHDIRTFQAPHYDLIISNPPYFVHG--QTLPDAARQLARHT-------GELDQTAL 141

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +  +R L   G  ++ +   +   +V +  +   +L  
Sbjct: 142 LESAARLLTPFGKLALVLPVEEGEQLVALATAGGWYLQR 180


>gi|262274926|ref|ZP_06052737.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886]
 gi|262221489|gb|EEY72803.1| predicted O-methyltransferase [Grimontia hollisae CIP 101886]
          Length = 269

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 54  ILGWRDFYNVRLTL-SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           I+G + F     T+   D   P     +L            E +D   ILD+GTGTG + 
Sbjct: 35  IVG-KGFRFKHFTVEDQDCGMPVSTDGVL-------LGAWAEAKDGHTILDIGTGTGLLA 86

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171
           L + +  P  +   +DI   A E A+ NA  +   +R D    D  +      FD IV N
Sbjct: 87  LMMAQRFPTARITALDIDAHAAETARFNAEQSAWHDRIDVHHQDICTWESSAQFDTIVCN 146

Query: 172 PPYIESVI 179
           PPY  +  
Sbjct: 147 PPYFTTGE 154


>gi|16081280|ref|NP_393592.1| N-methyl-transferase related protein [Thermoplasma acidophilum DSM
           1728]
 gi|10639259|emb|CAC11261.1| N-methyl-transferase related protein [Thermoplasma acidophilum]
          Length = 182

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 67/167 (40%), Gaps = 27/167 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            + ++ +      + P  ++ L+++ A              + +++G GTG V +  LK 
Sbjct: 2   HYCDLDIAECDGVYPPSEDSFLIIEYASC----------SGKAIEIGCGTGIVSICFLKR 51

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VDIS  A+E AK NA  NG++      +SD FS V G +D I+ N PYI   
Sbjct: 52  GCDIE--AVDISDLAVECAKDNASRNGLT--LKVYRSDLFSGVSGTYDTILFNAPYIPVE 107

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D             S  GG + L            HL+  G   +
Sbjct: 108 GEDA------------SWSGGRN-LEVVSRFLGQAREHLSASGQIYI 141


>gi|328946007|gb|EGG40153.1| methyltransferase domain protein [Streptococcus sanguinis SK1087]
          Length = 195

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F  R     ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVFSKR-----MIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VDI+ +AL +A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  SLAKAYGVA-ATMVDINQRALGLAQQNAERNQVSAHI--FQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165


>gi|188501450|gb|ACD54583.1| HemK-like protein methyltransferase-like protein [Adineta vaga]
          Length = 322

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 26/189 (13%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +    DT+        ++D+  + +        V R++D+G G G   + L K  P  + 
Sbjct: 116 VFFGPDTYRFSRAIRAVIDARPSTA------PAVRRVVDIGCGAGPGAIMLAKTYPNAEI 169

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVDI+  AL +   NA     +       SD    V+G FD+I+SNPPY+    VD   
Sbjct: 170 LGVDINDTALRLTSINARL--ANVNVIACHSDLLKDVQGDFDMIISNPPYL----VDSSM 223

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG----YNQK---VDVVR 237
              R         GG  G      I +   + L   G   +  G      Q     +V  
Sbjct: 224 RRYRH-------GGGSLGAELSVAIVNSACQRLTNGGTLLLYTGSAIMNGQDLFYEEVKN 276

Query: 238 IFESRKLFL 246
             ++  L  
Sbjct: 277 KLDNSGLCW 285


>gi|308389325|gb|ADO31645.1| hypothetical protein NMBB_1318 [Neisseria meningitidis alpha710]
          Length = 367

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L           LD+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|296389401|ref|ZP_06878876.1| hypothetical protein PaerPAb_14676 [Pseudomonas aeruginosa PAb1]
          Length = 316

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|107101605|ref|ZP_01365523.1| hypothetical protein PaerPA_01002649 [Pseudomonas aeruginosa PACS2]
          Length = 316

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|288905339|ref|YP_003430561.1| hypothetical protein GALLO_1138 [Streptococcus gallolyticus UCN34]
 gi|325978326|ref|YP_004288042.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|288732065|emb|CBI13630.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|325178254|emb|CBZ48298.1| ribosomal RNA small subunit methyltransferase C [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 197

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 69/189 (36%), Gaps = 35/189 (18%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  ++      +LDLG G G + ++L K     +
Sbjct: 29  TFLTDSGVF-----SKKMIDYGSQVLLNTVDFEKGKTLLDLGCGYGPLGISLAK-VQGVQ 82

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+++A+ NA  NGV+      QS+ +  V G FD I+SNPP          
Sbjct: 83  ATMVDINNRAIDLAQKNAEKNGVTANI--FQSNIYEKVTGTFDYIISNPPIRA------- 133

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESR 242
                             G     TI      +LN  G  ++ I   Q         E  
Sbjct: 134 ------------------GKQVVHTIIADSINYLNDGGSLTIVIQKKQGAPSAKAKMEEI 175

Query: 243 KLFLVNAFK 251
               V+  K
Sbjct: 176 -FGNVDILK 183


>gi|170695785|ref|ZP_02886927.1| methyltransferase small [Burkholderia graminis C4D1M]
 gi|170139390|gb|EDT07576.1| methyltransferase small [Burkholderia graminis C4D1M]
          Length = 375

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 26/189 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP + K       D+GTGTG +  ALL +    K V
Sbjct: 169 RIHPHYGVFSPVRGEYVDLVARTPLPSLNKA-----FDVGTGTGVLA-ALLAKRGVKKIV 222

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G  ++ D +Q+D F   EG   ++V NPP++ +     +  
Sbjct: 223 ATDQDPRALACARENLARLGYEQQVDVVQADLFP--EGRAPLVVCNPPWVPARPASPIEY 280

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V D D R+ L               G+S HL+    G   +    E  G   +  ++  
Sbjct: 281 AVYDPDSRMLLG-----------FLKGLSEHLSPGGEGWLILSDFAEHLGLRTRDWLLAA 329

Query: 239 FESRKLFLV 247
                L +V
Sbjct: 330 IADAGLTVV 338


>gi|324990800|gb|EGC22735.1| methyltransferase domain protein [Streptococcus sanguinis SK353]
          Length = 195

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAEERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAHGVA-ATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G   + I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLILVIQKKQGA 165


>gi|65317304|ref|ZP_00390263.1| COG2890: Methylase of polypeptide chain release factors [Bacillus
           anthracis str. A2012]
          Length = 81

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLF 245
           V++ +P+ +L GG DGL  YR   + +   L K  + + EIG  Q  DV  + +      
Sbjct: 2   VKEHEPKRALVGGEDGLDFYRRFMEELPNVLQKKAIVAFEIGVGQGEDVKGLLQQAFPHA 61

Query: 246 LVNAFKDYGGNDRVLLF 262
            V    D  G DR++  
Sbjct: 62  HVEVVFDINGKDRMVFA 78


>gi|308472428|ref|XP_003098442.1| hypothetical protein CRE_06900 [Caenorhabditis remanei]
 gi|308269106|gb|EFP13059.1| hypothetical protein CRE_06900 [Caenorhabditis remanei]
          Length = 225

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 14/161 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGV 127
            D +EP  +T LL+D A+   +  I  R+   +L++G G+G V   + +        +  
Sbjct: 16  HDVYEPAEDTFLLID-AIEKDIKEIRSREPQLVLEIGCGSGVVSTFVNQALGGNVTSMAT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           D++  AL++    A  N    + D +++D F+ +E   G  DV++ NPPY+ +       
Sbjct: 75  DLNPHALDVTLETAKLN--DIKIDVVRTDLFAGLENLVGKVDVLLFNPPYVPTEEEPSTN 132

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +E       ++  GG  G S    +   V   L+  G+  +
Sbjct: 133 IE-------LTYAGGRTGRSTLDRLLPRVPELLSPRGVFYL 166


>gi|227888774|ref|ZP_04006579.1| methyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227850611|gb|EEJ60697.1| methyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 203

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 34/183 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKES 119
           +++ T  +  F     ++L VD      +  ++  D  +  ILD+GTG G   L   K  
Sbjct: 30  DLKFTTDAGVF-----SKLRVDYGSGVLIKAMKNVDFPKDGILDVGTGYGPTGLFAAKFW 84

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VD++ +AL++AK NA  N + +  +  QSD +  V+  + +I++NPP      
Sbjct: 85  PDQEVDMVDVNERALDLAKRNAQFNRI-DNVNIYQSDIYEQVDKKYGLIITNPPIRA--- 140

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G      I      HL ++G+  V I   Q      ++
Sbjct: 141 ----------------------GKKVVDQILADAKDHLVENGILLVVIQKKQGAPSAKKL 178

Query: 239 FES 241
              
Sbjct: 179 MTK 181


>gi|224044185|ref|XP_002190962.1| PREDICTED: N-6 adenine-specific DNA methyltransferase 1 (putative)
           [Taeniopygia guttata]
          Length = 215

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 11/200 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVG 126
            D +EP  +T LL+D AL      +    V   L++G+G+G V   L      P    + 
Sbjct: 18  RDVYEPAEDTFLLLD-ALERDAGSLRGARVDICLEIGSGSGVVSTFLASSILGPSALYIC 76

Query: 127 VDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            DI+  A    +  A+ N V  +     L       + G  D+++ NPPY+ +       
Sbjct: 77  TDINPMAAYCTQETALLNNVHLQPVITDLVKGLSPRLNGKVDLLLFNPPYVVTP-----S 131

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRK 243
            EV+      S  GG  G      +   V   L+  GL  +  I  N   +++ I +   
Sbjct: 132 EEVKSCGIEASWAGGKQGREVMDRVFPLVPDLLSPGGLFYMVTIKENNPDEILEIMKKSG 191

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
           L          G + + +  
Sbjct: 192 LKGTQVLSRQAGQEMLTILR 211


>gi|74314805|ref|YP_313224.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sonnei Ss046]
 gi|260871094|ref|YP_003237496.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
           11128]
 gi|123615410|sp|Q3YU23|RSMC_SHISS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|73858282|gb|AAZ90989.1| putative enzyme [Shigella sonnei Ss046]
 gi|257767450|dbj|BAI38945.1| 16S rRNA m2G1207 methylase RsmC [Escherichia coli O111:H- str.
           11128]
 gi|320175421|gb|EFW50523.1| Ribosomal RNA small subunit methyltransferase C [Shigella
           dysenteriae CDC 74-1112]
 gi|320183349|gb|EFW58203.1| Ribosomal RNA small subunit methyltransferase C [Shigella flexneri
           CDC 796-83]
 gi|323166178|gb|EFZ51956.1| ribosomal RNA small subunit methyltransferase C [Shigella sonnei
           53G]
 gi|323176273|gb|EFZ61865.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1180]
          Length = 343

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|170701444|ref|ZP_02892400.1| methyltransferase small [Burkholderia ambifaria IOP40-10]
 gi|170133641|gb|EDT02013.1| methyltransferase small [Burkholderia ambifaria IOP40-10]
          Length = 377

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +  A+L      + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLA-AVLATRGVERIVATDQDPRALACARENIARLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 ADRVDVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLADHLEPGGEGWLIL 313


>gi|254235205|ref|ZP_04928528.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
 gi|126167136|gb|EAZ52647.1| hypothetical protein PACG_01095 [Pseudomonas aeruginosa C3719]
          Length = 316

 Score = 94.8 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 14/175 (8%)

Query: 55  LGWRDFYNVRL-TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           LG + F +    TL++D     P+T    D  +   L   +   + R  D+G G G   +
Sbjct: 94  LGEQLFVHSAFPTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAI 152

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            +    P  +  G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPP
Sbjct: 153 RIAMACPDAEVHGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPP 211

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           Y+    +D      R         GG+ G      I D     L   G   +  G
Sbjct: 212 YL----LDASERAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|301163366|emb|CBW22916.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 237

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG V L L +       + ++I   A + A  N   +    R +
Sbjct: 32  WTPVESSARILDIGTGTGLVALMLAQRC-SASVIALEIDETAAQQAAENITRSPWGSRIE 90

Query: 152 TLQSDWF----SSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D+      +    +D IVSNPPY    +                      D LS Y
Sbjct: 91  VVCQDFRLYSNKNNSLKYDTIVSNPPYFTDSLKCPDSQRNTARH---------NDNLS-Y 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +  GVS  L+ +G  +V I  +       I  S+ L+
Sbjct: 141 EELLKGVSNLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|295839041|ref|ZP_06825974.1| methylase [Streptomyces sp. SPB74]
 gi|295827299|gb|EFG65338.1| methylase [Streptomyces sp. SPB74]
          Length = 218

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 14/164 (8%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L      + P+ +T LL     A  L         R+LDL TG+GA+ L  L        
Sbjct: 4   LVTLPGVYAPQADTHLL-----ARVLAAEPVGPGTRVLDLCTGSGALAL--LAALRGAHV 56

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCL 183
              D+S +A+   + NA      +R   L+ D    V G  FD++VSNPPY+ +      
Sbjct: 57  SATDLSWRAVLSTRLNAAR--ARQRVRVLRGDLSGPVRGQRFDLVVSNPPYVPAPGAPRR 114

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               RD    ++ D G  G      +     + L+  G+  +  
Sbjct: 115 ----RDHSAALAWDAGPGGRRTLDRVCAHAGQVLSAHGVLLLVH 154


>gi|283469833|emb|CAQ49044.1| methyltransferase small domain superfamily [Staphylococcus aureus
           subsp. aureus ST398]
          Length = 202

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 84/246 (34%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------KTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|116050122|ref|YP_791063.1| hypothetical protein PA14_36390 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585343|gb|ABJ11358.1| putative methylase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 316

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 23/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLT--NAIVRSLKH-ESIHRI--LGWRDFYNVRL 65
           L  + G S           L       L   + I R      S  R+  LG + F +   
Sbjct: 49  LAGIFGWSRA----FAGESLPADWLTLLAGADLIRREADGWRSQVRVSSLGEQLFVHSAF 104

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            TL++D     P+T    D  +   L   +   + R  D+G G G   + +    P  + 
Sbjct: 105 PTLAADAVFFGPDTYRF-DRLIRSHLASSDPARIRRAADIGCGAGPGAIRIAMACPDAEV 163

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G+DI+  AL++A+ NA   GV       +SD  S   G FD+IV+NPPY+    +D   
Sbjct: 164 HGLDINPAALDLARVNAALAGVG-NLTLARSDLLSQAPGRFDLIVANPPYL----LDASE 218

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG+ G      I D     L   G   +  G
Sbjct: 219 RAYRH-------GGGMLGAGLSLAIVDAALERLEAGGSLLLYTG 255


>gi|325136282|gb|EGC58890.1| methyltransferase domain protein [Neisseria meningitidis M0579]
          Length = 367

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L           LD+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|258422612|ref|ZP_05685518.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257847184|gb|EEV71192.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|302332254|gb|ADL22447.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 202

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 84/246 (34%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|254805011|ref|YP_003083232.1| hypothetical protein NMO_1044 [Neisseria meningitidis alpha14]
 gi|254668553|emb|CBA06012.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
          Length = 367

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 317

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 318 FLDKAFAQAGLRVADVLK 335


>gi|225374517|ref|ZP_03751738.1| hypothetical protein ROSEINA2194_00132 [Roseburia inulinivorans DSM
           16841]
 gi|225213755|gb|EEG96109.1| hypothetical protein ROSEINA2194_00132 [Roseburia inulinivorans DSM
           16841]
          Length = 115

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 36/86 (41%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+   L     +      +  +  L D        A+ +  +H  +  I+G  +F 
Sbjct: 21  DAKTDAWLLLEMGCKIDRKFYYMHMEDDLPDDLLKEYELAVKKRAEHIPLQYIVGETEFM 80

Query: 62  NVRLTLSSDTFEPRPETELLVDSALA 87
            ++  ++S+   PR +TE LV+ AL 
Sbjct: 81  GLKFKVNSNVLIPRQDTETLVEEALK 106


>gi|209878063|ref|XP_002140473.1| hypothetical protein [Cryptosporidium muris RN66]
 gi|209556079|gb|EEA06124.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
          Length = 243

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 84/205 (40%), Gaps = 32/205 (15%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV----G 126
            +EP  +T  L +  L      I K +   I ++G G+G +  ++LKE    +       
Sbjct: 15  VYEPSDDTFFL-EDTLKQETEIIVKANPAIICEVGCGSGYISSSILKELNKRQIYPLTLL 73

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNPPYIES 177
            DI+  A+ +AK     N +S   + +  + F S           G+ D+I+ NPPY+  
Sbjct: 74  TDINKSAINLAKRTITHNNISSGTEFINMELFDSFRNINRSKLNNGILDLIIFNPPYVPC 133

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--------------VSRHLNKDGL- 222
           +  D L    +  +  ++  GG++GL        G              +   L+  GL 
Sbjct: 134 LE-DELIQLRKQCNIDVAWAGGLNGLEIINRFLFGKDNLHKTKLDEVICLYNILSYGGLC 192

Query: 223 -CSVEIGYNQKVDVVRIFESRKLFL 246
              +E G N+ +DV+ +    K ++
Sbjct: 193 YLLLE-GRNKPIDVINLLRQNKNYI 216


>gi|82750249|ref|YP_415990.1| hypothetical protein SAB0492 [Staphylococcus aureus RF122]
 gi|82655780|emb|CAI80180.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 202

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 84/246 (34%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVANKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|188501470|gb|ACD54602.1| modification methylase HemK family-like protein [Adineta vaga]
          Length = 322

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 71/189 (37%), Gaps = 26/189 (13%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +    DT+        ++D+  + +        V R++D+G G G   + L K  P  + 
Sbjct: 116 VFFGPDTYRFSRAIRAVIDARPSTA------PAVRRVVDIGCGAGPGAIMLAKTYPNAEI 169

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +GVDI+  AL +   NA     +       SD    V+G FD+I+SNPPY+    VD   
Sbjct: 170 LGVDINDTALRLTSINARL--ANVNVVACHSDLLKDVQGDFDMIISNPPYL----VDSSM 223

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG----YNQK---VDVVR 237
              R         GG  G      I +   + L   G   +  G      Q     +V  
Sbjct: 224 RRYRH-------GGGSLGAELSVAIVNSACQRLANGGTLLLYTGSAIMNGQDLFYEEVKN 276

Query: 238 IFESRKLFL 246
             ++  L  
Sbjct: 277 KLDNSGLCW 285


>gi|157156493|ref|YP_001465889.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           E24377A]
 gi|157163818|ref|YP_001461136.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli HS]
 gi|209921836|ref|YP_002295920.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli SE11]
 gi|218556905|ref|YP_002389819.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli IAI1]
 gi|256020001|ref|ZP_05433866.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella sp. D9]
 gi|300815995|ref|ZP_07096218.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|300824407|ref|ZP_07104520.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|307313695|ref|ZP_07593314.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|309795645|ref|ZP_07690061.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|331680480|ref|ZP_08381139.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H591]
 gi|332281147|ref|ZP_08393560.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
 gi|226712937|sp|A7ZVR0|RSMC_ECO24 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712943|sp|B7LXT2|RSMC_ECO8A RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712945|sp|A8A899|RSMC_ECOHS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712949|sp|B6I2Q2|RSMC_ECOSE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157069498|gb|ABV08753.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           HS]
 gi|157078523|gb|ABV18231.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           E24377A]
 gi|209915095|dbj|BAG80169.1| ribosomal RNA small subunit methyltransferase [Escherichia coli
           SE11]
 gi|218363674|emb|CAR01333.1| 16S RNA m2G1207 methylase [Escherichia coli IAI1]
 gi|300523049|gb|EFK44118.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300531202|gb|EFK52264.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|306906518|gb|EFN37031.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|308120769|gb|EFO58031.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|315063673|gb|ADT78000.1| 16S rRNA m(2)G1207 methyltransferase [Escherichia coli W]
 gi|320200514|gb|EFW75100.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           EC4100B]
 gi|323380246|gb|ADX52514.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli KO11]
 gi|323945890|gb|EGB41935.1| methyltransferase small domain-containing protein [Escherichia coli
           H120]
 gi|324016914|gb|EGB86133.1| methyltransferase small domain [Escherichia coli MS 117-3]
 gi|324118324|gb|EGC12218.1| methyltransferase small domain-containing protein [Escherichia coli
           E1167]
 gi|331071943|gb|EGI43279.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli H591]
 gi|332103499|gb|EGJ06845.1| ribosomal RNA small subunit methyltransferase C [Shigella sp. D9]
          Length = 343

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|325694368|gb|EGD36280.1| methyltransferase domain protein [Streptococcus sanguinis SK150]
          Length = 195

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++ +   R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFKAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQ-GVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165


>gi|70732053|ref|YP_261809.1| HemK family modification methylase [Pseudomonas fluorescens Pf-5]
 gi|68346352|gb|AAY93958.1| modification methylase, HemK family [Pseudomonas fluorescens Pf-5]
          Length = 326

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/161 (26%), Positives = 63/161 (39%), Gaps = 14/161 (8%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            ++     P+T       +A    R+    V R+ D+G GTGA  L + +  P  + + +
Sbjct: 119 DAEAVFFGPDTYRFARLIVACLQERLTV--VRRVADIGCGTGAGALLVARARPEAQVLAL 176

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +AL     NA   GV        SD    VEG FD+I++NPPY+     D      
Sbjct: 177 DINPRALRYCAINAELAGVG-NVGVYHSDVLDGVEGNFDLILANPPYM----KDPRQRAY 231

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           R         GG+ G      I       L   G   +  G
Sbjct: 232 RH-------GGGVLGEHLSLRILAQALPRLEPQGTLLLYTG 265


>gi|308809617|ref|XP_003082118.1| Predicted N6-DNA-methyltransferase (ISS) [Ostreococcus tauri]
 gi|116060585|emb|CAL55921.1| Predicted N6-DNA-methyltransferase (ISS) [Ostreococcus tauri]
          Length = 1282

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 19/200 (9%)

Query: 64   RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESP 120
            ++    D + P  ++ LLVD+  +     +  R     +++GTG+G V  +   L +   
Sbjct: 1069 KIARHDDVYPPAEDSFLLVDALSSLWNTSLRARKPSLCVEIGTGSGYVACSNALLARGHG 1128

Query: 121  FFKGV---GVDISCKALEIAKSNAVTNGVSERFDTL-QSDWFSSV------EGLFDVIVS 170
              +       D++ +A+E   +    +GV  R   + + D            G  DV++ 
Sbjct: 1129 CGEITTTRASDVNARAVETCAATLRAHGVDARACVVARGDLLEPHRDAIEARGGIDVLLF 1188

Query: 171  NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGY 229
            NPPY+ +        EV       +  GG+DG      +   V   L   G    V I  
Sbjct: 1189 NPPYVVTP-----SEEVGRDGIASAWAGGVDGREVLDRLLPDVRDALAPGGIFLCVLIEQ 1243

Query: 230  NQKVDVVRIFESRKLFLVNA 249
            N+  +++ + E+  L     
Sbjct: 1244 NKPREIMAMMEAMGLRSAIV 1263


>gi|304405628|ref|ZP_07387287.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
 gi|304345667|gb|EFM11502.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
          Length = 204

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 65/184 (35%), Gaps = 34/184 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R T  +  F         +D      +  ++      +LD+G G G + L+  K +   
Sbjct: 28  LRFTTDAGVFSKSG-----IDFGSRVLIDALDIPVDAEVLDVGCGYGPIGLSAAKLATKG 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               +DI+ +A+ +A+ NA  NG+ +     QSD + SV E  +D I++NPP        
Sbjct: 83  HVTMIDINERAIALAQENAKLNGI-DNITVKQSDVYQSVRENRYDAILTNPPIRA----- 136

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIF 239
                               G S    I +     L   G   V I   Q       ++ 
Sbjct: 137 --------------------GKSVVHQIFEEGYDLLKPGGSMWVVIQKKQGAPSAEAKLL 176

Query: 240 ESRK 243
           E   
Sbjct: 177 ERFG 180


>gi|241889584|ref|ZP_04776882.1| methyltransferase small [Gemella haemolysans ATCC 10379]
 gi|241863206|gb|EER67590.1| methyltransferase small [Gemella haemolysans ATCC 10379]
          Length = 198

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 72/191 (37%), Gaps = 33/191 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESP 120
           N++    +  F     ++  VD      L      ++  +++D+G G G + + L K+ P
Sbjct: 26  NLKFYTDNGVF-----SKESVDFGTKTMLESFTTNKENAKVVDIGCGYGVISIFLAKKYP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            +K   VD++ + LE++K N   N +    + L+S  F +V G FD++++NPP       
Sbjct: 81  TYKFTMVDVNNRVLELSKKNIELNKIENEVEVLESSSFDNVVGTFDIVLTNPPIRA---- 136

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIF 239
                                G      I      HLN  G   V I   Q      ++ 
Sbjct: 137 ---------------------GKKIVHKIMTDSYEHLNAQGELWVVIQKKQGMASCKKLL 175

Query: 240 ESRKLFLVNAF 250
           E     +V   
Sbjct: 176 EDT-FSMVEVV 185


>gi|323181910|gb|EFZ67322.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           1357]
          Length = 333

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 156 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 210

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 211 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 262

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 263 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 289


>gi|187730163|ref|YP_001883033.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii CDC
           3083-94]
 gi|226712995|sp|B2TZQ2|RSMC_SHIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|187427155|gb|ACD06429.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           CDC 3083-94]
          Length = 343

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANYVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|218703063|ref|YP_002410692.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           IAI39]
 gi|226712941|sp|B7NVD9|RSMC_ECO7I RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218373049|emb|CAR20939.1| 16S RNA m2G1207 methylase [Escherichia coli IAI39]
          Length = 343

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|331666196|ref|ZP_08367077.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA271]
 gi|331066407|gb|EGI38284.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA271]
          Length = 343

 Score = 94.4 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|66048324|ref|YP_238165.1| hypothetical protein Psyr_5100 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63259031|gb|AAY40127.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970293|gb|EGH70359.1| hypothetical protein PSYAR_07359 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 315

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/229 (24%), Positives = 81/229 (35%), Gaps = 34/229 (14%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVR---- 64
           L  V G S     + P+S+L   +   L  A  + R         +     F ++     
Sbjct: 48  LRDVFGWSR----LIPESMLPVEEAQGLLAAGILERKEDG-----LKSRVRFSSLDDLLL 98

Query: 65  -----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                 T   D+    P+T     S       +     V R +D+G GTGA  + +    
Sbjct: 99  VHSAFPTSDEDSVFFGPDTYRFAQSINRHL--QGTSHPVNRAVDIGCGTGAGAMLIAVAR 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY+    
Sbjct: 157 PQAQVHAVDINPKALHFAQTNAAVAGLK-NMECCHSDILSGLSGNFDLIVANPPYM---- 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            D      R         G   G      I       L   G   +  G
Sbjct: 212 KDTQRRAYRH-------GGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|304387506|ref|ZP_07369695.1| methyltransferase domain protein [Neisseria meningitidis ATCC
           13091]
 gi|304338393|gb|EFM04514.1| methyltransferase domain protein [Neisseria meningitidis ATCC
           13091]
          Length = 367

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L           LD+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTALDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|302185806|ref|ZP_07262479.1| hypothetical protein Psyrps6_05655 [Pseudomonas syringae pv.
           syringae 642]
          Length = 315

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 83/231 (35%), Gaps = 38/231 (16%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVR---- 64
           L  V G S     + P+S+L   +   L  A  + R         +     F ++     
Sbjct: 48  LRDVFGWSR----LIPESMLPVEEAQGLLAAGILERKEDG-----LKSRVRFSSLDSLLL 98

Query: 65  -----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                 T   D+    P+T     S       +     + R +D+G GTGA  + +    
Sbjct: 99  VHSAFPTSDEDSVFFGPDTYRFAQSINRHL--QGTSHPINRAVDIGCGTGAGAMLIAVAR 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY++   
Sbjct: 157 PQAQVHAVDINPKALHFAQTNAAVAGLK-NMECCHSDILSGLSGNFDLIVANPPYMKDTK 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                        R +   G D L       I       L   G   +  G
Sbjct: 216 -------------RRAYRHGGDALGADLSVRILRESVDRLTPGGSLVLYTG 253


>gi|296111507|ref|YP_003621889.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154]
 gi|295833039|gb|ADG40920.1| hypothetical protein LKI_06905 [Leuconostoc kimchii IMSNU 11154]
          Length = 213

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 35/204 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKR--DVVRILDLGTGTGA 110
              +      L S T   + ++ +     VD      L  + K   +  +ILDLGTG G 
Sbjct: 21  EHHYQTFDFKLLSHTLHFKTDSGVFSKSTVDFGTRTMLTALTKTTIESGKILDLGTGYGP 80

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V +A+ K     +    D++ +AL++A+ NA  NGV ++    QSD + ++   + +I+ 
Sbjct: 81  VGVAIAKAL-NRRVDMSDVNERALDLARQNADNNGVGDQVKIFQSDMYDNISDKYALILV 139

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP                            G +    +      HL   G     +   
Sbjct: 140 NPPIRA-------------------------GKAVVTAMLQEGVNHLIPGGKLIAVLQKK 174

Query: 231 QKV--DVVRIFESRKLFLVNAFKD 252
           Q        +  +     +   KD
Sbjct: 175 QGAPSAQKNMLSAFGNVTI-IHKD 197


>gi|153839372|ref|ZP_01992039.1| methyltransferase [Vibrio parahaemolyticus AQ3810]
 gi|149747120|gb|EDM58108.1| methyltransferase [Vibrio parahaemolyticus AQ3810]
          Length = 239

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   
Sbjct: 33  MLGAWMESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWH 92

Query: 148 ERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D    S    F  IV NPPY  +                 +     D L H 
Sbjct: 93  DRLSVQHTDVLIFSPPQRFQRIVCNPPYFNTGEQAKQSQ--------RATARHTDSLRH- 143

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +     + L+ +G  S  +   +    + +  ++   L
Sbjct: 144 DALLKCCYQLLDAEGKASFVLPITEGELFIELALTQGWAL 183


>gi|52425643|ref|YP_088780.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|81825502|sp|Q65S65|RSMC_MANSM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|52307695|gb|AAU38195.1| RsmC protein [Mannheimia succiniciproducens MBEL55E]
          Length = 333

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 23/167 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + + +L        P   +   +D      L  ++      +LDLG G G +   + 
Sbjct: 153 WKTYRSPQLGELIVYSLPGVFSANELDVGTQLLLSTVKDNIRGDVLDLGCGAGVIGSMIK 212

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            ++P  K    DI   AL  A+   + N +S +   L SD FS VEG FD+I+SNPP+ +
Sbjct: 213 LKNPPAKVTMTDIHAMALASAERTLLENKLSGQV--LASDVFSHVEGKFDLIISNPPFHD 270

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +                            R +      HL   G  
Sbjct: 271 GIDTA---------------------YRAVRELISNAKWHLVPGGEL 296


>gi|28897280|ref|NP_796885.1| hypothetical protein VP0506 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260876245|ref|ZP_05888600.1| methyltransferase small domain protein [Vibrio parahaemolyticus
           AN-5034]
 gi|81839890|sp|Q87SB8|TRMN6_VIBPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|28805489|dbj|BAC58769.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308092858|gb|EFO42553.1| methyltransferase small domain protein [Vibrio parahaemolyticus
           AN-5034]
          Length = 239

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   
Sbjct: 33  MLGAWMESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWH 92

Query: 148 ERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D    S    F  IV NPPY  +                 +     D L H 
Sbjct: 93  DRLSVQHTDVLIFSPPQRFQRIVCNPPYFNTGEQAKQSQ--------RATARHTDSLRH- 143

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +     + L+ +G  S  +   +    + +  ++   L
Sbjct: 144 DALLKCCYQLLDAEGKASFVLPITEGELFIELALTQGWSL 183


>gi|254671959|emb|CBA04367.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
          Length = 367

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 317

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 318 FLDKAFAQAGLRVADVLK 335


>gi|117164966|emb|CAJ88518.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 220

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V   +    + P+ +T LL       +L          +LD+GTGT    LA+      
Sbjct: 3   SVNFMVLPGVYAPQEDTALL-----TGALSDESLPPAASVLDVGTGT--GALAVAAARRG 55

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIV 180
            +   VD+S +A+  A+ NA  +GV  R      + F+ V G  FD++++NPPY+ +   
Sbjct: 56  ARVTAVDVSWRAVCAARVNAARSGV--RIRVRHGNLFTPVRGETFDLVLANPPYVPAPAG 113

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                         + D G DG      I       L   G+  +
Sbjct: 114 GRRPRGA-----ARAWDAGHDGRMVLDRICREAPALLRPGGVLLL 153


>gi|26251256|ref|NP_757296.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           CFT073]
 gi|227885143|ref|ZP_04002948.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           83972]
 gi|300980808|ref|ZP_07175189.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|301048334|ref|ZP_07195364.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|331661001|ref|ZP_08361933.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA206]
 gi|81472610|sp|Q8FA64|RSMC_ECOL6 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|26111689|gb|AAN83870.1|AE016772_48 Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           CFT073]
 gi|227837972|gb|EEJ48438.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli
           83972]
 gi|300299794|gb|EFJ56179.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300409125|gb|EFJ92663.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|307556603|gb|ADN49378.1| 16S RNA G1207 methylase RsmC [Escherichia coli ABU 83972]
 gi|315293340|gb|EFU52692.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|315298365|gb|EFU57620.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|331052043|gb|EGI24082.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli TA206]
          Length = 343

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|293476634|ref|ZP_06665042.1| rsmC [Escherichia coli B088]
 gi|291321087|gb|EFE60529.1| rsmC [Escherichia coli B088]
          Length = 343

 Score = 94.4 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A    SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFALHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|197285751|ref|YP_002151623.1| hypothetical protein PMI1896 [Proteus mirabilis HI4320]
 gi|262828580|sp|B4F055|TRMN6_PROMH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|194683238|emb|CAR43937.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 252

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERF 150
                    +LD+GTG+G + L L + +P   +  G+++   A   A  NA  +  S   
Sbjct: 42  WAPITKAKTVLDIGTGSGLIALMLAQRAPQVERIDGIELDEDAALQASENAQQSQWSSLI 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D +         +D+IVSNPPY   +V       E   +   ++ +G        
Sbjct: 102 HIYHHDIYQYAQQAPTRYDLIVSNPPYFEPAVACRNQEREQARYTKTLTHEG-------- 153

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGND--RVLLF 262
             + D   + +  +GL  V + Y      + I + +   +V     KD       R+LL 
Sbjct: 154 --LLDSAQQLITDEGLFCVVLPYLIGEQFIEISQRKGWNVVQRVNIKDSADKPYHRILLA 211


>gi|167838068|ref|ZP_02464927.1| hypothetical protein Bpse38_16267 [Burkholderia thailandensis
           MSMB43]
          Length = 379

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 74/211 (35%), Gaps = 36/211 (17%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          D
Sbjct: 160 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVELV--------ARAPLPSTSLAFD 205

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +   L       + V  D   +AL  A  N    G + R + +++D F   +G
Sbjct: 206 IGAGTGVLAAVLASRGVE-RVVATDQDKRALACAARNVARLGYASRVEVVEADLFP--DG 262

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              ++V NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 263 RAPLVVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 311

Query: 222 LCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              +    E  G   + +++   E+  L +V
Sbjct: 312 WLILSDFAEHLGLRTREELLGWIEAAGLVVV 342


>gi|331645067|ref|ZP_08346178.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M605]
 gi|330909815|gb|EGH38325.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           AA86]
 gi|331045824|gb|EGI17943.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA
           m2G1207methyltransferase) [Escherichia coli M605]
          Length = 343

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|301155995|emb|CBW15465.1| 16S rRNA m2G1207 methylase [Haemophilus parainfluenzae T3T1]
          Length = 330

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F        L D+  +  L  +      ++LD+G G G +   + K  P 
Sbjct: 160 DLRIFSLPGVFS----ANEL-DNGTSLLLSTLTSPIQGKVLDVGCGAGVIGSMIKKHHPK 214

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 DI   A++ A+     N +  R   + SD FS +EG FD+I+SNPP+ + V   
Sbjct: 215 ADVTMTDIHAMAIQSARQTLAENQLEGRV--IASDVFSHIEGKFDLIISNPPFHDGVDTA 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                    + +      HL   G  
Sbjct: 273 ---------------------YRAVKELIQQAKWHLTAGGEL 293


>gi|320195321|gb|EFW69949.1| Ribosomal RNA small subunit methyltransferase C [Escherichia coli
           WV_060327]
          Length = 343

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANSVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|311281054|ref|YP_003943285.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
 gi|308750249|gb|ADO50001.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
          Length = 342

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 64/169 (37%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W D+   ++ +      F  R      +D      L  +      ++LD+G G G +   
Sbjct: 159 WGDYALDSLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG     D   S+ FS V G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGFEG--DVFASNVFSEVTGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   + +  G  RHLN  G  
Sbjct: 272 H---------------------DGLQTSLEAAQALIRGAVRHLNSGGEL 299


>gi|255721473|ref|XP_002545671.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240136160|gb|EER35713.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 222

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 23/209 (11%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAV 111
           I+G  D+           +EP  ++ LL+D        +    K  +  + ++GTG+G V
Sbjct: 6   IIGKIDY--------EKVYEPSEDSFLLLDCFEQEKDFIQAAFKESIPFVTEIGTGSGIV 57

Query: 112 CLALLKE-SPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLF 165
              + K   P    +  DI+  A    +E  + N      +   D+ Q    S+V     
Sbjct: 58  TTFIAKNVLPKAMFLATDINPHACKTVIETMRCNKENPQDAYLIDSTQMSLTSAVRPHTI 117

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           D++V NPPY+ +  +  +  +  D DP    ++L GG DG+     + D + + L+ +G+
Sbjct: 118 DILVFNPPYVPASEIPEIPTQ--DEDPVWLDLALVGGEDGMVVTWKVLDCLEQTLSSNGI 175

Query: 223 CSVEI-GYNQKVDVVRIFESRKLFLVNAF 250
             +     N+   V  I   R    V   
Sbjct: 176 AYILFCARNKPESVAEIMRERGW-NVEVV 203


>gi|330961454|gb|EGH61714.1| hypothetical protein PMA4326_23191 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 314

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T   D+    P+T     S       +     + R +D+G GTGA  L +    P     
Sbjct: 105 TTEEDSVFFGPDTYRFAQSINRHL--QNTSHPISRAVDIGCGTGAGGLLIAVACPGAHVY 162

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+ KAL  A++NA   G+    +   SD  S V G FD+IV+NPPY++         
Sbjct: 163 AVDINPKALHFAETNAAVAGL-HNVECCPSDILSGVTGNFDLIVANPPYMKDSK------ 215

Query: 186 EVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                  R +   G D L       I       L   G   +  G
Sbjct: 216 -------RRAYRHGGDALGADLSVRILRESVDRLTPGGSLVLYTG 253


>gi|261339036|ref|ZP_05966894.1| hypothetical protein ENTCAN_05245 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318871|gb|EFC57809.1| ribosomal RNA small subunit methyltransferase C [Enterobacter
           cancerogenus ATCC 35316]
          Length = 342

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +      F     +   +D      L  +      ++LD+G G G +   L   SP 
Sbjct: 166 DLTIKTLPGVF-----SRDYLDVGSKLLLSTLTPHTKGKVLDVGCGAGVLATVLASHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NG     + + S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLTLCDVSAPAVEASRATLAANGFEG--EVIASNVFSDVTGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   + +  G  RHLN  G  
Sbjct: 273 ---------------DGMETSLEAAQALIRGAVRHLNSGGEL 299


>gi|262163924|ref|ZP_06031663.1| predicted O-methyltransferase [Vibrio mimicus VM223]
 gi|262027452|gb|EEY46118.1| predicted O-methyltransferase [Vibrio mimicus VM223]
          Length = 239

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +     +   +DI   A +  + N+  +  + R   LQ+D 
Sbjct: 43  PASILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATEKNSENSPWANRIQCLQADV 102

Query: 158 -FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +      F  I+ NPPY  S          R             G   ++ + + + + 
Sbjct: 103 RYWHPPQRFSAIICNPPYFNSGETA--QQFARA-------TARHTGSLKHQELIECLPQL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           L  DG+ S  +   +    + + E   L+L
Sbjct: 154 LEPDGVASFILPKTEGDQFIALAEQAGLYL 183


>gi|213027134|ref|ZP_03341581.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 161

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 10/116 (8%)

Query: 17  LSSHQVIVD-PDSV----LDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSD 70
           L S  + +D P+ +    L   ++  +   ++R +     +  +     F      +   
Sbjct: 50  LPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRINERIPVAYLTNKAWFCGHEFYVDER 109

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
              PR     L+++  A  + +  K     ILD+ TG+G + +A     P  +   
Sbjct: 110 VLVPRSPIGELINNHFAGLISQQPKY----ILDMCTGSGCIAIACAYAFPDAEVDA 161


>gi|332360339|gb|EGJ38151.1| methyltransferase domain protein [Streptococcus sanguinis SK49]
          Length = 195

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 80/210 (38%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N +S   +  QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQ-GVTATMVDINQRALDLAQKNAERNQISA--EIFQSNVYEKVNGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  IF       + +  +++ + K
Sbjct: 166 PSAKSKMEAIFGNCEIVKKDKGYYILRSEK 195


>gi|309355779|emb|CAP38256.2| hypothetical protein CBG_21464 [Caenorhabditis briggsae AF16]
          Length = 230

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGV 127
            D +EP  +T LL+D A+   +  I  R    +L++G G+G V   + +        V  
Sbjct: 16  HDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALGGNVTSVAT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           D++  AL++    A  N    + D +++D F+ +E   G  DV++ NPPY+ +       
Sbjct: 75  DLNPHALDVTLETAKLN--DIKIDVVRTDLFAGLENLVGKVDVLLFNPPYVPTEEEPKSN 132

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +E       ++  GG  G S    +   V   L+  G+  +
Sbjct: 133 IE-------LTYAGGRTGRSTLDRLLPRVPELLSPRGVFYL 166


>gi|207722022|ref|YP_002252460.1| hypothetical protein 1177; methyltransferase small [Ralstonia
           solanacearum MolK2]
 gi|206587196|emb|CAQ17780.1| conserved hypothetical protein 1177; methyltransferase small
           [Ralstonia solanacearum MolK2]
          Length = 406

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 31/200 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV +A                 D+GTGTG +   L K   
Sbjct: 199 GARIHPHYGVFSPVRGEYVDLVANA--------PLPSQALAFDIGTGTGVLAAVLAKRGV 250

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VG D   +AL  A+ N    G+  R + +++D F   EG   +IV NPP++ +   
Sbjct: 251 K-RVVGTDQDARALVCARENLACLGLQSRVEVIEADLFP--EGRAPLIVCNPPWLPARPS 307

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R   DG++ HL  +  G   +    E  G   + 
Sbjct: 308 SPIERAVYDPDSRM-----------LRGFLDGLAAHLEPNGEGWLILSDFAEHLGLRTRE 356

Query: 234 DVVRIFESRKLFLVNAFKDY 253
            ++ + ++  L  V    D 
Sbjct: 357 ALLAMIDAAGL-QVAGRDDI 375


>gi|269986472|gb|EEZ92757.1| methylase [Candidatus Parvarchaeum acidiphilum ARMAN-4]
          Length = 196

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 21/164 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           V +      + P  ++ LL+++          K     +LD+  G+G + L   + +   
Sbjct: 2   VDIKELKGVYPPAEDSFLLLNAV---------KYAHGDVLDMCAGSGIIGLNAARLAN-- 50

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
               VDI+ KA++  + NA  NG+S  F+ + SD F +++   FD+I +NPPY+   +  
Sbjct: 51  TVPFVDINPKAIKAIEYNARKNGIS-NFECINSDLFYALDKRKFDIIYANPPYLPKKMEK 109

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +L GG  G      I   +++HL ++G   +
Sbjct: 110 GWIG--------YALSGGETGNEITLKIISSLTKHLKRNGEAFI 145


>gi|256833417|ref|YP_003162144.1| methyltransferase small [Jonesia denitrificans DSM 20603]
 gi|256686948|gb|ACV09841.1| methyltransferase small [Jonesia denitrificans DSM 20603]
          Length = 536

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 11/151 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L    A         + +V R+LD+GTG G    AL       + +  DIS +A+ 
Sbjct: 163 PDHVLGAGGASFTLAQVTPRTNVGRVLDIGTGCGVQ--ALAATRHARQVMATDISPRAVA 220

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A+ NA  N      +  +  +F  V G  FD++VSNPP++   I    G ++  ++ R 
Sbjct: 221 FARFNAALN--DSDVEIREGSFFEPVHGETFDLVVSNPPFV---ITPRTGTDLALYEYR- 274

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             DGG  G      +   V ++L   G   +
Sbjct: 275 --DGGAAGDRVVAQMVTDVPQYLAAGGCAVM 303


>gi|198274619|ref|ZP_03207151.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
 gi|198272066|gb|EDY96335.1| hypothetical protein BACPLE_00771 [Bacteroides plebeius DSM 17135]
          Length = 238

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 73/180 (40%), Gaps = 20/180 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +     R+LD+GTG+G + L L + +P      VDI    +E A+ N      S+R +
Sbjct: 32  WAQVDGAGRMLDIGTGSGLIALMLAQRNPDAFVTAVDIDEAVVEQARENVARTPWSDRME 91

Query: 152 TLQSDWFSSVE---GLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             + D   + E   G FD IVSNPPY +ESV        +             D L    
Sbjct: 92  VERLDIRKAPEEWNGCFDAIVSNPPYFVESVKCPQAQRNMARH---------TDELDF-D 141

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL-----FLVNAFKDYGGNDRVLLF 262
            +   VS  L++ G  SV +      D V +   + L       V+  ++     RVL+ 
Sbjct: 142 ALLSKVSVLLSEKGSFSVVLPATASADFVALAFGKGLHLSRQTWVHPRQELPAK-RVLMA 200


>gi|330507706|ref|YP_004384134.1| methylase [Methanosaeta concilii GP-6]
 gi|328928514|gb|AEB68316.1| methylase, putative [Methanosaeta concilii GP-6]
          Length = 167

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E R    +L++G G+G V L L ++      V +DI+  A+   +            + +
Sbjct: 7   EARPEDHVLEVGCGSGLVSLELARQVESL--VALDINPHAVRATRE--------RGVEVI 56

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +SD F  + G FD+I+ NPPY+ +   +     +       +LDGG  G          +
Sbjct: 57  RSDLFEGIRGKFDLIIFNPPYLPTKQAERSDQWI-----NYALDGGESGRETIGRFLLDL 111

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           + HL   G   + I      + V +  
Sbjct: 112 AEHLRPGGRALLLISSLSGPEEVEMMA 138


>gi|167034013|ref|YP_001669244.1| methyltransferase small [Pseudomonas putida GB-1]
 gi|166860501|gb|ABY98908.1| methyltransferase small [Pseudomonas putida GB-1]
          Length = 317

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           ++   T S D     P++               E+  V   +D+G G+G   L + + + 
Sbjct: 103 HSAWPTNSRDAVFFGPDSYRFAQLIHDHLSSTPER--VQHAVDIGCGSGVGALLIARAAQ 160

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDI+  AL     NA   GV+      +SD    + G FD+IV+NPPY+    +
Sbjct: 161 HAQVCAVDINPMALRHTAINAALAGVA-NVSVERSDLLDDIAGTFDLIVANPPYM----L 215

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           D      R         GG  G      I +     L+  G   +  G
Sbjct: 216 DAGQRAYRH-------GGGALGAELSLRIVEQARERLSPGGTLLLYTG 256


>gi|327459751|gb|EGF06091.1| methyltransferase domain protein [Streptococcus sanguinis SK1057]
          Length = 195

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQ-GVTATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVNGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165


>gi|325689831|gb|EGD31835.1| methyltransferase domain protein [Streptococcus sanguinis SK115]
          Length = 195

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 68/190 (35%), Gaps = 35/190 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ ++D      L  ++     R+LD+G G G + L L K     
Sbjct: 28  LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGLTLAKAYGVA 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP         
Sbjct: 83  -ATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVNGIFDHIISNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFES 241
                              G      +  G   HL + G  ++ I   Q         E+
Sbjct: 134 -------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGAPSAKSKMEA 174

Query: 242 RKLFLVNAFK 251
                    K
Sbjct: 175 V-FSNCEIVK 183


>gi|226327941|ref|ZP_03803459.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198]
 gi|225203645|gb|EEG85999.1| hypothetical protein PROPEN_01822 [Proteus penneri ATCC 35198]
          Length = 123

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +QSD F+++    +D+IV+NPPY++   +  L  E +  +P ++L  GIDGL   R I  
Sbjct: 1   MQSDLFNALVPTPYDIIVTNPPYVDIEDMGDLPDEYQV-EPELALASGIDGLDITRQILL 59

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               +L++ G+   E+G N  V ++  F       +      GG   V +  R
Sbjct: 60  KAPEYLSEKGILVCEVG-NSMVHLIEQFPEVPFTWLEFEN--GGIG-VFMLTR 108


>gi|82546721|ref|YP_410668.1| 16S ribosomal RNA m2G1207 methyltransferase [Shigella boydii Sb227]
 gi|123557836|sp|Q31SW8|RSMC_SHIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|81248132|gb|ABB68840.1| putative enzyme [Shigella boydii Sb227]
 gi|332090318|gb|EGI95416.1| ribosomal RNA small subunit methyltransferase C [Shigella boydii
           3594-74]
          Length = 343

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPSVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|306831419|ref|ZP_07464577.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426204|gb|EFM29318.1| methyltransferase domain protein [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 197

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 69/189 (36%), Gaps = 35/189 (18%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  ++      +LDLG G G + ++L K     +
Sbjct: 29  TFLTDSGVF-----SKKMIDYGSQVLLNTVDFEKGKMLLDLGCGYGPLGISLAK-VQGVQ 82

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+++A+ NA  NGV+      QS+ +  V G FD I+SNPP          
Sbjct: 83  ATMVDINNRAIDLAQKNAEKNGVTANI--FQSNIYEKVTGTFDYIISNPPIRA------- 133

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESR 242
                             G     TI      +LN  G  ++ I   Q         E  
Sbjct: 134 ------------------GKQVVHTIIADSINYLNDGGSLTIVIQKKQGAPSAKAKMEEI 175

Query: 243 KLFLVNAFK 251
               V+  K
Sbjct: 176 -FGNVDILK 183


>gi|260912922|ref|ZP_05919407.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
           dagmatis ATCC 43325]
 gi|260632912|gb|EEX51078.1| ribosomal RNA small subunit methyltransferase C [Pasteurella
           dagmatis ATCC 43325]
          Length = 328

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + + +L   +    P   +   +D+     L  I++    ++LDLG G G +   + 
Sbjct: 148 WKTYQHSKLQDLTVYSLPGVFSANELDAGTDLLLSTIDQSIRGKVLDLGCGAGVIGAYIK 207

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +++P  + +  DI   AL  AK     N +    D L SD FS +EG FD+I+SNPP+  
Sbjct: 208 QQNPKTQVIMTDIHAMALASAKRTLAENKLEA--DVLASDVFSHIEGKFDLIISNPPF-- 263

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HL + G  
Sbjct: 264 -----------------------HDGVDTAYRAVSELISKAKWHLTQGGEL 291


>gi|134294590|ref|YP_001118325.1| methyltransferase small [Burkholderia vietnamiensis G4]
 gi|134137747|gb|ABO53490.1| methyltransferase small [Burkholderia vietnamiensis G4]
          Length = 392

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 71/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 156 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 205

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +  A+L        V  D   +AL  A+ N    G 
Sbjct: 206 ----ARTPLPATSLAFDVGTGTGVLA-AVLAARGVEHVVATDQDPRALACARENVARLGH 260

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D + +D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 261 ADRVDVVAADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 307

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 308 RGFLSGLAAHLAPGGEGWLIL 328


>gi|319410481|emb|CBY90842.1| Uncharacterized RNA methyltransferase BH0687 [Neisseria
           meningitidis WUE 2594]
          Length = 367

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 317

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 318 FLDKAFAQAGLRVADVLK 335


>gi|15644412|ref|NP_229464.1| hypothetical protein TM1664 [Thermotoga maritima MSB8]
 gi|4982239|gb|AAD36731.1|AE001808_6 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 210

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 29/145 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    L  ++     ++LDLG G G + + L KE P  +    DI+ +A+E AK NA
Sbjct: 46  IDKATQVLLENLKVH-GKKVLDLGCGYGVIGIVLKKEYPDLEVYMSDINKRAVEFAKINA 104

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + V    D    + +   E   FD+IV NPP +                         
Sbjct: 105 KDHNVE--VDIRWGNLYEPWEDMKFDMIVCNPPIVA------------------------ 138

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
            G   +  I       L + G   +
Sbjct: 139 -GKKVWMEIVKSAPEFLEEGGSLQI 162


>gi|188533128|ref|YP_001906925.1| Putative enzyme [Erwinia tasmaniensis Et1/99]
 gi|188028170|emb|CAO96028.1| Putative enzyme [Erwinia tasmaniensis Et1/99]
          Length = 277

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R+LD+G+G+G + L L + +    +   V++  +A   A+ N   +  + R 
Sbjct: 71  WAPVTSVKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRV 130

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q+D   W    E  + +IVSNPPY                 P  +      GL+H  
Sbjct: 131 HVQQADVVEWAQRCEHSYSLIVSNPPYFSPGSQCAS--------PERTTARYTTGLTH-E 181

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLLF 262
            + D   + +++DG   V +  +    ++     R   L     D   ND     RVLL 
Sbjct: 182 MLLDCAEKLIDEDGFFCVILPASAGSKLLEQALQRGWHL-RFRTDIADNDTRPANRVLLA 240


>gi|15923531|ref|NP_371065.1| hypothetical protein SAV0541 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926219|ref|NP_373752.1| hypothetical protein SA0499 [Staphylococcus aureus subsp. aureus
           N315]
 gi|49482771|ref|YP_039995.1| hypothetical protein SAR0546 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57651417|ref|YP_185473.1| hypothetical protein SACOL0587 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87161944|ref|YP_493229.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194303|ref|YP_499095.1| hypothetical protein SAOUHSC_00523 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148267001|ref|YP_001245944.1| hypothetical protein SaurJH9_0564 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150393048|ref|YP_001315723.1| hypothetical protein SaurJH1_0578 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151220715|ref|YP_001331537.1| hypothetical protein NWMN_0503 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978870|ref|YP_001441129.1| hypothetical protein SAHV_0539 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508781|ref|YP_001574440.1| hypothetical protein USA300HOU_0535 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221141022|ref|ZP_03565515.1| hypothetical protein SauraJ_05208 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315651|ref|ZP_04838864.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253732549|ref|ZP_04866714.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005335|ref|ZP_05143936.2| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257424655|ref|ZP_05601082.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427323|ref|ZP_05603722.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429959|ref|ZP_05606343.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257432661|ref|ZP_05609021.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435565|ref|ZP_05611613.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus subsp. aureus M876]
 gi|257795360|ref|ZP_05644339.1| methyltransferase [Staphylococcus aureus A9781]
 gi|258408953|ref|ZP_05681234.1| methyltransferase [Staphylococcus aureus A9763]
 gi|258420409|ref|ZP_05683352.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus A9719]
 gi|258439330|ref|ZP_05690262.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A9299]
 gi|258444070|ref|ZP_05692407.1| methyltransferase small subunit [Staphylococcus aureus A8115]
 gi|258446338|ref|ZP_05694496.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A6300]
 gi|258448431|ref|ZP_05696546.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A6224]
 gi|258452726|ref|ZP_05700724.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258453787|ref|ZP_05701761.1| methyltransferase small subunit [Staphylococcus aureus A5937]
 gi|262049584|ref|ZP_06022453.1| hypothetical protein SAD30_0378 [Staphylococcus aureus D30]
 gi|269202164|ref|YP_003281433.1| hypothetical protein SAAV_0504 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894976|ref|ZP_06303199.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8117]
 gi|282904919|ref|ZP_06312777.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282907869|ref|ZP_06315704.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282910182|ref|ZP_06317986.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282913374|ref|ZP_06321163.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282918329|ref|ZP_06326066.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus C427]
 gi|282923291|ref|ZP_06330971.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus C101]
 gi|282924455|ref|ZP_06332127.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A9765]
 gi|282928878|ref|ZP_06336469.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A10102]
 gi|283957339|ref|ZP_06374792.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284023551|ref|ZP_06377949.1| hypothetical protein Saura13_03137 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293500420|ref|ZP_06666271.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293509365|ref|ZP_06668076.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus M809]
 gi|293523952|ref|ZP_06670639.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294850317|ref|ZP_06791051.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A9754]
 gi|295406918|ref|ZP_06816721.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8819]
 gi|295427079|ref|ZP_06819715.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|296275787|ref|ZP_06858294.1| hypothetical protein SauraMR_05547 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246258|ref|ZP_06930107.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8796]
 gi|297590568|ref|ZP_06949207.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|304381860|ref|ZP_07364507.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|677850|emb|CAA45511.1| hypothetical protein [Staphylococcus aureus RN4220]
 gi|13700432|dbj|BAB41730.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246309|dbj|BAB56703.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|49240900|emb|CAG39567.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57285603|gb|AAW37697.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87127918|gb|ABD22432.1| Methyltransferase small domain [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201861|gb|ABD29671.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147740070|gb|ABQ48368.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149945500|gb|ABR51436.1| methyltransferase small [Staphylococcus aureus subsp. aureus JH1]
 gi|150373515|dbj|BAF66775.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721005|dbj|BAF77422.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367590|gb|ABX28561.1| hypothetical protein USA300HOU_0535 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253729478|gb|EES98207.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257272225|gb|EEV04348.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275516|gb|EEV06989.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279156|gb|EEV09757.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282076|gb|EEV12211.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284756|gb|EEV14875.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus subsp. aureus M876]
 gi|257789332|gb|EEV27672.1| methyltransferase [Staphylococcus aureus A9781]
 gi|257840304|gb|EEV64767.1| methyltransferase [Staphylococcus aureus A9763]
 gi|257843599|gb|EEV68005.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus A9719]
 gi|257847667|gb|EEV71666.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A9299]
 gi|257850740|gb|EEV74685.1| methyltransferase small subunit [Staphylococcus aureus A8115]
 gi|257854932|gb|EEV77877.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A6300]
 gi|257858300|gb|EEV81187.1| methyltransferase small domain-containing protein [Staphylococcus
           aureus A6224]
 gi|257859599|gb|EEV82449.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257864043|gb|EEV86797.1| methyltransferase small subunit [Staphylococcus aureus A5937]
 gi|259162324|gb|EEW46897.1| hypothetical protein SAD30_0378 [Staphylococcus aureus D30]
 gi|262074454|gb|ACY10427.1| hypothetical protein SAAV_0504 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940114|emb|CBI48490.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282314159|gb|EFB44549.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus C101]
 gi|282317463|gb|EFB47835.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus C427]
 gi|282322406|gb|EFB52728.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus M899]
 gi|282325574|gb|EFB55882.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus WBG10049]
 gi|282328253|gb|EFB58531.1| methyltransferase small subunit [Staphylococcus aureus subsp.
           aureus WW2703/97]
 gi|282331744|gb|EFB61255.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282589486|gb|EFB94575.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A10102]
 gi|282592866|gb|EFB97870.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A9765]
 gi|282762658|gb|EFC02795.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8117]
 gi|283790790|gb|EFC29605.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285816242|gb|ADC36729.1| hypothetical protein SA2981_0518 [Staphylococcus aureus 04-02981]
 gi|290920915|gb|EFD97976.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291095425|gb|EFE25686.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467462|gb|EFF09977.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus M809]
 gi|294822829|gb|EFG39264.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A9754]
 gi|294968149|gb|EFG44175.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8819]
 gi|295128867|gb|EFG58497.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus EMRSA16]
 gi|297176856|gb|EFH36114.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus A8796]
 gi|297576867|gb|EFH95582.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus MN8]
 gi|302750432|gb|ADL64609.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304339646|gb|EFM05593.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312439039|gb|ADQ78110.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus TCH60]
 gi|312829037|emb|CBX33879.1| uncharacterized protein ybxB (P23) (ORF23) [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315128834|gb|EFT84833.1| hypothetical protein CGSSa03_13117 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193905|gb|EFU24299.1| hypothetical protein CGSSa00_12767 [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315196647|gb|EFU26994.1| hypothetical protein CGSSa01_14540 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320141594|gb|EFW33433.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320141777|gb|EFW33605.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329313261|gb|AEB87674.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329727940|gb|EGG64389.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329731023|gb|EGG67396.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21189]
 gi|1094969|prf||2107219A rpoB upstream ORF
 gi|1096953|prf||2113202A ORF 202
          Length = 202

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 83/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|325954701|ref|YP_004238361.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922]
 gi|323437319|gb|ADX67783.1| tRNA (adenine-N(6)-)-methyltransferase [Weeksella virosa DSM 16922]
          Length = 237

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D  +ILD+GTGTG + L L + +P      V+I   A + A+ N   +   ER  
Sbjct: 34  WARVSDAKKILDVGTGTGLIALMLAQRNPTAMIDAVEIDASAYKQAERNVQESKFHERVS 93

Query: 152 TLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            + +D+   S    +D IVSNPPY E            + + + +     + L+    + 
Sbjct: 94  VIFNDFSAFSPNQKYDCIVSNPPYFEENKRMQ------NSERKTARQ--QNNLTF-HQLC 144

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              S  L K+G   + + ++   ++  + +   LF
Sbjct: 145 KKASDLLEKNGHLCLILPFSSLDNIREVAKIFGLF 179


>gi|317123694|ref|YP_004097806.1| methyltransferase small [Intrasporangium calvum DSM 43043]
 gi|315587782|gb|ADU47079.1| methyltransferase small [Intrasporangium calvum DSM 43043]
          Length = 506

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 12/152 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L +  A         +  V R LDLGTG G   L L   +     V  DIS +AL
Sbjct: 143 RPDHVLGIGGASTTLATWTIRHRVDRALDLGTGCGVQALHLAGHTG--SIVATDISERAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ NA   G+    D  + D    V G  F +IVSNPP++ +   D    +V  ++ R
Sbjct: 201 AFARFNAALAGLD--VDLRRGDLLDPVAGERFSLIVSNPPFVITPRAD----DVPVYEYR 254

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              DGG  G +  RT+   V   L   G+  +
Sbjct: 255 ---DGGRSGDAIVRTLVRTVRDALEPGGVAQL 283


>gi|117618463|ref|YP_858125.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|262827849|sp|A0KPC4|TRMN6_AERHH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|117559870|gb|ABK36818.1| SmtA protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
          Length = 236

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 10/135 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +  R+LD+G+G+G + L L + SP   +   V++   A   A+ NA  +   ER 
Sbjct: 33  WAPVTNARRVLDIGSGSGLIALMLAQRSPADCRIDAVELDSNAARQARENAAASPWHERV 92

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             ++S   +     +D+IVSNPPY  +          RD  P  +L     GL   R + 
Sbjct: 93  TVIESAIQTYQATPYDLIVSNPPYFVAG------QSFRD--PARALARHTGGLD-SRDLL 143

Query: 211 DGVSRHLNKDGLCSV 225
               R L  +G  ++
Sbjct: 144 AACDRLLAPNGEVAL 158


>gi|89901414|ref|YP_523885.1| methyltransferase small [Rhodoferax ferrireducens T118]
 gi|89346151|gb|ABD70354.1| methyltransferase small [Rhodoferax ferrireducens T118]
          Length = 409

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 27/225 (12%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFS 89
             R+   +T+A     K   I   LG     + R+      F P R E   LV +A    
Sbjct: 168 SLRELSGITSAHEWRRKGVEIAA-LGEPP--HNRIHPHYGVFSPVRGEYIHLVATAHLPK 224

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
            P    +  +   D+GTGTG +   L +     + V  D   +AL  A+ N     V ++
Sbjct: 225 PPT--GQTTLTAFDIGTGTGVLSAVLARRGVN-RIVATDQDPRALACARDNIARLNVEDK 281

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              +Q+D F   EG   ++V NPP++ +     +   V D           +G       
Sbjct: 282 VQLVQTDLFP--EGQASLVVCNPPWLPARPSSPIERAVYD-----------EGGRMLAGF 328

Query: 210 ADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
             G++ HL     G   +    E  G   + +++  FE   L +V
Sbjct: 329 LKGLTAHLAPKGEGWLILSNLAEHLGLRTRAELLEAFEHNGLRVV 373


>gi|332366610|gb|EGJ44354.1| methyltransferase domain protein [Streptococcus sanguinis SK1059]
          Length = 195

 Score = 94.0 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ ++D      L  ++     R+LD+G G G + L L K     
Sbjct: 28  LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGLTLAKAQ-GV 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VDI+ +AL++A+ NA  N +S   D  QS+ +  V G+FD I+SNPP         
Sbjct: 82  TATMVDINQRALDLAQKNAERNQISA--DIFQSNVYEKVNGIFDHIISNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVR 237
                              G      +  G   HL + G  ++ I   Q        +  
Sbjct: 134 -------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGAPSAKSKMEA 174

Query: 238 IF-------ESRKLFLVNAFK 251
           IF       +++  +++ + K
Sbjct: 175 IFGNCEIVKKNKGYYILRSEK 195


>gi|330976371|gb|EGH76428.1| hypothetical protein PSYAP_06959 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 315

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/231 (23%), Positives = 83/231 (35%), Gaps = 38/231 (16%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVR---- 64
           L  V G S     + P+S+L   +   L  A  + R         +     F ++     
Sbjct: 48  LRDVFGWSR----LIPESMLPVEEAQGLLAAGILERKEDG-----LKSRVRFSSLDNLLL 98

Query: 65  -----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                 T   D+    P+T     S       +     + R +D+G GTGA  + +    
Sbjct: 99  VHSAFPTTDEDSVFFGPDTYRFAQSINRHL--QGTSHPINRAVDIGCGTGAGAMLIAVAR 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY++   
Sbjct: 157 PQAQVHAVDINPKALHFAQTNATVAGLK-NMECCHSDILSGLSGSFDLIVANPPYMKDTK 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                        R +   G D L       I       L   G   +  G
Sbjct: 216 -------------RRAYRHGGDALGADLSVRIVRESLDRLTPGGSLVLYTG 253


>gi|308095311|ref|ZP_05904919.2| methyltransferase small [Vibrio parahaemolyticus Peru-466]
 gi|308125642|ref|ZP_05776410.2| methyltransferase small [Vibrio parahaemolyticus K5030]
 gi|308126588|ref|ZP_05911121.2| methyltransferase small [Vibrio parahaemolyticus AQ4037]
 gi|308088413|gb|EFO38108.1| methyltransferase small [Vibrio parahaemolyticus Peru-466]
 gi|308107655|gb|EFO45195.1| methyltransferase small [Vibrio parahaemolyticus AQ4037]
 gi|308113323|gb|EFO50863.1| methyltransferase small [Vibrio parahaemolyticus K5030]
          Length = 215

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +E      ILD+GTGTG + L   +  P  K   VDI   A+E A  N   +   
Sbjct: 9   MLGAWMESPSPAHILDIGTGTGLLALMCAQRFPDAKITAVDIETTAVEAASHNFSHSPWH 68

Query: 148 ERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D    S    F  IV NPPY  +                 +     D L H 
Sbjct: 69  DRLSVQHTDVLIFSPPQRFQRIVCNPPYFNTGEQAKQSQ--------RATARHTDSLRH- 119

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +     + L+ +G  S  +   +    + +  ++   L
Sbjct: 120 DALLKCCYQLLDAEGKASFVLPITEGELFIELALTQGWSL 159


>gi|22537113|ref|NP_687964.1| hypothetical protein SAG0952 [Streptococcus agalactiae 2603V/R]
 gi|25010994|ref|NP_735389.1| hypothetical protein gbs0940 [Streptococcus agalactiae NEM316]
 gi|76788359|ref|YP_329668.1| methyltransferase domain-containing protein [Streptococcus
           agalactiae A909]
 gi|77406474|ref|ZP_00783529.1| Methyltransferase small domain family [Streptococcus agalactiae
           H36B]
 gi|77411028|ref|ZP_00787383.1| Methyltransferase small domain family [Streptococcus agalactiae
           CJB111]
 gi|77413257|ref|ZP_00789454.1| Methyltransferase small domain family [Streptococcus agalactiae
           515]
 gi|22533974|gb|AAM99836.1|AE014235_9 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|23095394|emb|CAD46599.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563416|gb|ABA46000.1| methyltransferase domain protein [Streptococcus agalactiae A909]
 gi|77160717|gb|EAO71831.1| Methyltransferase small domain family [Streptococcus agalactiae
           515]
 gi|77162952|gb|EAO73908.1| Methyltransferase small domain family [Streptococcus agalactiae
           CJB111]
 gi|77174909|gb|EAO77723.1| Methyltransferase small domain family [Streptococcus agalactiae
           H36B]
          Length = 196

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 40/201 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     +      +  F  R     ++D      L  +       +LDLG G G + +
Sbjct: 23  LLGE----SFSFLTDAGVFSKR-----MIDYGSQVLLNSLHFEKNKSLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + ++   FD I+SNPP
Sbjct: 74  SLAK-VQGVKATMVDINTRALELAKKNATRNGVV--VEVFQSNIYENISKTFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G     +I +    +LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHSIIEESICYLNTGGSLTIVIQKKQGA 165

Query: 234 --DVVRIFESRKLFLVNAFKD 252
                ++ ++     +   KD
Sbjct: 166 PSAKAKMLDTFGNCDI-LKKD 185


>gi|194439306|ref|ZP_03071385.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           101-1]
 gi|194421788|gb|EDX37796.1| ribosomal RNA small subunit methyltransferase C [Escherichia coli
           101-1]
 gi|323969515|gb|EGB64807.1| methyltransferase small domain-containing protein [Escherichia coli
           TA007]
          Length = 343

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFSRHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|312863385|ref|ZP_07723623.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
 gi|322516989|ref|ZP_08069879.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
           49124]
 gi|311100921|gb|EFQ59126.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
 gi|322124472|gb|EFX95967.1| methyltransferase domain protein [Streptococcus vestibularis ATCC
           49124]
          Length = 196

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 75/199 (37%), Gaps = 34/199 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D +++++ L  ++F+   +  +    ++D      L  ++      +LD+G G G + +
Sbjct: 14  HDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLNALDLEAGKTVLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   +DI+ +A+++AK NA  N V       QS+ + +V G FD ++SNPP
Sbjct: 74  SLAK-VQGVKVTMIDINSRAIDLAKQNAERNKVEA--TIFQSNIYKNVTGSFDYVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      + +    HLN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHQVIEEAYDHLNLSGTLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E          K
Sbjct: 166 PSAKAKMEEV-FGNAEVVK 183


>gi|295677830|ref|YP_003606354.1| methyltransferase small [Burkholderia sp. CCGE1002]
 gi|295437673|gb|ADG16843.1| methyltransferase small [Burkholderia sp. CCGE1002]
          Length = 374

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 35/227 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV+  R+   L  A     K   I   LG R        +        P     VD    
Sbjct: 140 SVVSLRELLGLIGAHEWRKKGVEIAA-LGER--------IHPHYGVFSPVRGEYVDLVAR 190

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +LP +E        D+GTGTG +  ALL +    K V  D   +AL  A+ N    G +
Sbjct: 191 TALPSLE-----LAFDIGTGTGVLA-ALLAKRGVRKIVATDQDARALACARENLARLGYA 244

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            + + +Q+D F   +G   ++V NPP++ +     L   V D D R+ L G ++GL    
Sbjct: 245 GQVEVVQADLFP--DGRAPLVVCNPPWVPARPASPLEYAVYDPDSRM-LLGFLNGL---- 297

Query: 208 TIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
                 + HL  D  G   +    E  G   +  ++       L +V
Sbjct: 298 ------ADHLTPDGEGWLIISDFAEHLGLRTREWLLAAIGHAGLTVV 338


>gi|226360731|ref|YP_002778509.1| hypothetical protein ROP_13170 [Rhodococcus opacus B4]
 gi|226239216|dbj|BAH49564.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 377

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 26/187 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP +      +  D+GTGTG +  A+L      K +
Sbjct: 167 RIHPGYGVFSPIRGEYVDLVAETPLPSL-----AKAFDIGTGTGVLA-AVLAHRGVEKVI 220

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             ++   AL  A++N    G S+R   +++D F   EG   ++V NPP+I +       +
Sbjct: 221 STELDANALACARANLDRLGYSDRVQVVETDLFP--EGRAPLVVCNPPWIPAR--PTSPI 276

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
           E   +DP              R    G++ HL     G   +    E  G   + +++ +
Sbjct: 277 EYAIYDPDS---------RMLRGFLAGLAEHLEPGGEGWLVLSDIAEHLGLRTREELLTL 327

Query: 239 FESRKLF 245
            +   L 
Sbjct: 328 IDDAGLT 334


>gi|319744973|gb|EFV97302.1| methyltransferase domain protein [Streptococcus agalactiae ATCC
           13813]
          Length = 196

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 40/201 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     +      +  F  R     ++D      L  +       +LDLG G G + +
Sbjct: 23  LLGE----SFSFLTDAGVFSKR-----MIDYGSQVLLSSLHFEKHKSLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + ++   FD I+SNPP
Sbjct: 74  SLAK-VQGVKATMVDINTRALELAKKNATRNGVV--VEVFQSNIYENISKTFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G     +I +    +LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHSIIEESICYLNTGGSLTIVIQKKQGA 165

Query: 234 --DVVRIFESRKLFLVNAFKD 252
                ++ ++     +   KD
Sbjct: 166 PSAKAKMLDTFGNCDI-LKKD 185


>gi|298693872|gb|ADI97094.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 202

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 83/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNQKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|269964516|ref|ZP_06178756.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B]
 gi|269830753|gb|EEZ84972.1| hypothetical protein VMC_01860 [Vibrio alginolyticus 40B]
          Length = 239

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 10/165 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                I+  +  +ILD+GTGTG + L   +     +   VDI   A+  A+ N   +  S
Sbjct: 33  MLGAWIQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWS 92

Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D         F  I+ NPPY  S                 +     D L H 
Sbjct: 93  DRVSVHHTDILHFTPTHPFQRIICNPPYFNSGEQSKHSQ--------RATARHTDTLGH- 143

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +       L+ +G  S  +   +    + +  ++  +L    +
Sbjct: 144 NALLQRCYHLLDDEGKASFVLPITEGEQFIELALNQGWYLSRICR 188


>gi|317049188|ref|YP_004116836.1| methyltransferase small [Pantoea sp. At-9b]
 gi|316950805|gb|ADU70280.1| methyltransferase small [Pantoea sp. At-9b]
          Length = 249

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R+LD+G+G+G + L + + +    +   V++   A + A+ N   +  + R 
Sbjct: 43  WAPVAGVRRVLDIGSGSGLIALMIAQRTADEVQIDAVELDADAAQQAQENVQASPWAARV 102

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q+D   W  + E  + +IVSNPPY            V    P+ +     D L H +
Sbjct: 103 TLHQADIAQWADACEQRYSLIVSNPPYFAPG--------VACATPQRATARSTDTLDH-Q 153

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLLF 262
           T+    ++ + ++G   V +  +    ++   +     L     D   Y      RVLL 
Sbjct: 154 TLLRCAAQLIEEEGFFCVVLPESLGQSMIEQAQQDGWHL-RFRYDVAEYAHRPPHRVLLG 212


>gi|116333247|ref|YP_794774.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367]
 gi|116098594|gb|ABJ63743.1| 16S RNA G1207 methylase RsmC [Lactobacillus brevis ATCC 367]
          Length = 203

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 38/170 (22%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K      LDLGTG G + LAL K  P  +   VD++  ALE+A+ NA  N + E  +   
Sbjct: 57  KTPAGSWLDLGTGYGPIGLALAKRWPDRQVTMVDVNELALELARKNATANQI-ENVEIKT 115

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD +  V   +  I++NPP             VR             G      +  G +
Sbjct: 116 SDIYDQVTQRYAAILTNPP-------------VRA------------GKQVVTAMLTGAA 150

Query: 215 RHLNKDGLCSVEI----GYNQKVDVVR--------IFESRKLFLVNAFKD 252
            HL   G  +V +    G       ++        I + +  +++ + KD
Sbjct: 151 DHLLPGGTLTVVLQKKQGAPSAEKTMQSTFGNCTIIKKDKGYYILESTKD 200


>gi|116617402|ref|YP_817773.1| 16S RNA G1207 methylase RsmC [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096249|gb|ABJ61400.1| 16S rRNA m(2)G 1207 methyltransferase [Leuconostoc mesenteroides
           subsp. mesenteroides ATCC 8293]
          Length = 211

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 33/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKE 118
           + +  T  S  F         VD      L  +EK    + ++LDLGTG G V L + K 
Sbjct: 32  HELHFTTDSGVFSKST-----VDFGTRTMLDALEKTSIPIGKVLDLGTGYGPVGLTVAKA 86

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                   VD++ +AL++A+ NA  NGV++R +  +SD ++S+   + +I+ NPP     
Sbjct: 87  Y-QRHVDMVDVNERALDLARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPPIRA-- 143

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                  G      +    + +L   G   
Sbjct: 144 -----------------------GKQVVTAMLQEAANYLQDGGKLI 166


>gi|298489513|ref|ZP_07007523.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298155969|gb|EFH97079.1| predicted methyltransferase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 314

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|289677510|ref|ZP_06498400.1| hypothetical protein PsyrpsF_29771 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 315

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/229 (23%), Positives = 81/229 (35%), Gaps = 34/229 (14%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVR---- 64
           L  V G S     + P+S+L   +   L  A  + R         +     F ++     
Sbjct: 48  LRDVFGWSR----LIPESMLPVEEAQGLLAAGILERKEDG-----LKSRVRFSSLDNLLL 98

Query: 65  -----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                 T   D+    P+T     S       +     + R +D+G GTGA  + +    
Sbjct: 99  VHSAFPTTDEDSVFFGPDTYRFAQSINRHL--QGTSHPINRAVDIGCGTGAGAMLIAVAR 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY+    
Sbjct: 157 PQAQVHAVDINPKALHFAQTNATVAGLK-NMECCHSDILSGLSGNFDLIVANPPYM---- 211

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            D      R         G   G      I       L   G   +  G
Sbjct: 212 KDTQRRAYRH-------GGDALGADLSVRIVRESLDRLTPGGSLVLYTG 253


>gi|300926393|ref|ZP_07142190.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
 gi|300417588|gb|EFK00899.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
          Length = 343

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    N V    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAGNCVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|302540724|ref|ZP_07293066.1| putative methylase [Streptomyces hygroscopicus ATCC 53653]
 gi|302458342|gb|EFL21435.1| putative methylase [Streptomyces himastatinicus ATCC 53653]
          Length = 218

 Score = 93.6 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL ++       R       ++LD+GTGTGA+ L L           VD+S 
Sbjct: 2   YAPQDDTALLAEAVC-----REPAMPGAQVLDIGTGTGALAL-LAARCGAAGVEAVDVSA 55

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A+  A  N   +G   R      D  S   G  FDV+++NPPY+ S      G  VR  
Sbjct: 56  RAVLAAWLNTRRSGQPVRVRL--GDLASVASGRRFDVVLANPPYVPSRPG---GPFVRAR 110

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             R + + G DG +    +   +   L   G+  +
Sbjct: 111 GGR-AWNAGPDGRAALDRLCARIPGLLRPRGVLLL 144


>gi|325130320|gb|EGC53087.1| methyltransferase domain protein [Neisseria meningitidis
           OX99.30304]
          Length = 331

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L           LD+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTALDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFVDLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 268


>gi|254253388|ref|ZP_04946706.1| Methylase [Burkholderia dolosa AUO158]
 gi|124895997|gb|EAY69877.1| Methylase [Burkholderia dolosa AUO158]
          Length = 390

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 154 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 203

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 204 ----ARAPLPATSLAFDVGTGTGVLAAVLASRGVQ-RIVATDQDARALACARENVARLGY 258

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 259 ADRVDVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 305

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 306 RGFLAGLADHLEPGGEGWLIL 326


>gi|209516570|ref|ZP_03265424.1| methyltransferase small [Burkholderia sp. H160]
 gi|209503011|gb|EEA03013.1| methyltransferase small [Burkholderia sp. H160]
          Length = 374

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/227 (25%), Positives = 87/227 (38%), Gaps = 35/227 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV+  R+   L  A     K   I   LG R        +        P     VD    
Sbjct: 140 SVVSLRELLGLIGAHEWRKKGVEIAA-LGER--------IHPHYGVFSPVRGEYVDLVAR 190

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             LP ++        D+GTGTG +  ALL +    K V  D   +AL  A+ N    G  
Sbjct: 191 TPLPSLD-----LAFDIGTGTGVLA-ALLAKRGVGKIVATDQDSRALACARENLARLGYG 244

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           E+ + +Q+D F   +G   ++V NPP++ +     L   V D D R+ L G ++GL    
Sbjct: 245 EQVEIVQADLFP--DGRAPLVVCNPPWVPARPASPLEYAVYDPDSRM-LLGFLNGL---- 297

Query: 208 TIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
                 + HL     G   +    E  G   +  ++   +   L +V
Sbjct: 298 ------ADHLTPGGEGWLIISDFAEHLGLRTREWLLAAIDHAGLSVV 338


>gi|331017756|gb|EGH97812.1| hypothetical protein PLA106_17069 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 319

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL  D+    P+T     S       R     + R  D+G GTGA  L +    P  +  
Sbjct: 110 TLDEDSVFFGPDTYRFAQSINHHL--RSTSHPIKRAADIGCGTGAGALLIAVARPDAQVY 167

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+ KAL  A++NAV  G+        SD  S + G FD+IV+NPPY++         
Sbjct: 168 AVDINPKALHFAQANAVVAGL-HNMQCCHSDILSGLTGNFDLIVANPPYMKDAK------ 220

Query: 186 EVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                  R +   G D L       I       L + G   +  G
Sbjct: 221 -------RRAYRHGGDALGADLSVRILRESLDRLTRGGSLVLYTG 258


>gi|148270257|ref|YP_001244717.1| methyltransferase small [Thermotoga petrophila RKU-1]
 gi|147735801|gb|ABQ47141.1| 16S rRNA m(2)G 1207 methyltransferase [Thermotoga petrophila RKU-1]
          Length = 210

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 66/179 (36%), Gaps = 30/179 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    L  ++     ++LDLG G G V + L KE P  +    DI+ +A+E AK NA
Sbjct: 46  IDKATQVLLENLKVH-GKKVLDLGCGYGVVGIVLKKEYPDLEVYMSDINKRAVEFAKINA 104

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             + V    D    + +   EG  FD+IV NPP +                         
Sbjct: 105 KDHNVE--VDIRWGNLYEPWEGMKFDMIVCNPPVVA------------------------ 138

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            G   +  I       L + G   V   +N+    +R F       V      GG  RV
Sbjct: 139 -GKKVWMEIVRKAPEFLEEGGSLQVVAYHNKGGRRIRDFMEEIFGNVEELCKTGGI-RV 195


>gi|282915864|ref|ZP_06323629.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus D139]
 gi|283769697|ref|ZP_06342589.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus H19]
 gi|282320160|gb|EFB50505.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus D139]
 gi|283459844|gb|EFC06934.1| ribosomal RNA small subunit methyltransferase C [Staphylococcus
           aureus subsp. aureus H19]
          Length = 202

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 83/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    +P SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDENP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|269959613|ref|ZP_06173994.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835671|gb|EEZ89749.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 239

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 10/165 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                       +ILD+GTGTG + L   +  P  +   +DI   A+E A+ N   +  S
Sbjct: 33  MLGAWANCSPQSKILDIGTGTGLLALMCAQRFPNAQITALDIEISAIEAAQKNFTQSPWS 92

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D      E  F+ I+ NPPY  S                 +     D L H 
Sbjct: 93  DRLWVRHTDVLQFESEQRFEHIICNPPYFNSGEQSKQSQ--------RATARHTDTLQHA 144

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +       L +DG  S  +   +    + + + +   L    +
Sbjct: 145 -ALLKRCYELLEQDGNASFVLPITEGEQFIAMAQQQGWHLSRICR 188


>gi|269126682|ref|YP_003300052.1| methylase [Thermomonospora curvata DSM 43183]
 gi|268311640|gb|ACY98014.1| methylase [Thermomonospora curvata DSM 43183]
          Length = 223

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 67/185 (36%), Gaps = 15/185 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL +     +L +   R   R+LDL TGT  V       +   + V  D
Sbjct: 7   PGVYRPQGDTALLTE-----ALRQAPIRPGARVLDLCTGT-GVVAMAAARAGARQVVATD 60

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           +S +A+  A+ NA   G+  R   L+ D    V G  FDVI +NPPY+      C G   
Sbjct: 61  VSVRAVLAARLNARLRGLPIRV--LRGDLVEPVAGKHFDVITANPPYVP-----CRGGPP 113

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFL 246
                  +  GG  G      +       L   G+  V           V    +  L  
Sbjct: 114 ARHGRSRTWYGGPHGRLWLDRLCAAAPPLLAPGGVLLVVHSALCGVQATVEALRAHGLKA 173

Query: 247 VNAFK 251
               +
Sbjct: 174 AVTAR 178


>gi|320321800|gb|EFW77898.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. B076]
          Length = 314

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|300362314|ref|ZP_07058490.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03]
 gi|300353305|gb|EFJ69177.1| methyltransferase domain protein [Lactobacillus gasseri JV-V03]
          Length = 217

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F + R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 44  DLKFTTDAGVFSKLRIDYGSGVLIKTMKDLTFPKAG------ILDVGTGYGPMGLFAAKF 97

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +AL++A+ NA  N +    +  QS+ +  V+  + ++++NPP     
Sbjct: 98  WPDQEVDMVDVNERALDLARRNAKFNQI-NNVNIYQSNIYEQVDKKYGLVITNPPIRA-- 154

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I      HL ++G+  V I   Q      +
Sbjct: 155 -----------------------GKKVVDQILSEAKEHLVENGILLVVIQKKQGAPSAKK 191

Query: 238 IFES 241
           +   
Sbjct: 192 LMTK 195


>gi|228477542|ref|ZP_04062175.1| methyltransferase small domain protein [Streptococcus salivarius
           SK126]
 gi|228250686|gb|EEK09884.1| methyltransferase small domain protein [Streptococcus salivarius
           SK126]
          Length = 196

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 76/199 (38%), Gaps = 34/199 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D +++++ L  ++F+   +  +    ++D      L  ++      +LD+G G G + +
Sbjct: 14  HDIHDLKVNLLGESFQFYTDAGVFSKKMIDFGSQVLLSALDLEAGKTLLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   +DI+ +A+++A+ NA  N V       QS+ + +V G FD I+SNPP
Sbjct: 74  SLAK-VQGVKATMIDINSRAIDLARQNAQRNKVEA--TIFQSNIYENVTGSFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      + +    +LN+ G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHQVIEEAYDYLNQGGNLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E          K
Sbjct: 166 PSAKAKMEDV-FGNAEVVK 183


>gi|195470849|ref|XP_002087719.1| GE15042 [Drosophila yakuba]
 gi|194173820|gb|EDW87431.1| GE15042 [Drosophila yakuba]
          Length = 224

 Score = 93.6 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 13/198 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+   
Sbjct: 8   HLSLEDFEHVYEPAEDSFLLLD-ALEKDLEYLDQLQPRLCVELGSGSGVIITALAKKLAG 66

Query: 122 FK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           F   +  DI+ KA    +  A  NG   R D+++     ++     DV++ NPPY+ +  
Sbjct: 67  FSLCLATDINPKACNATRRTATRNGA--RLDSIRCSLADALRSQSVDVLLFNPPYVVTSD 124

Query: 180 VDCLGLEVRDF-DPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQ 231
            +    +     +         S  GG DG      +   +   L+  G+   + +  N+
Sbjct: 125 AELQTQQFDTHSESSTDRNLVFSWAGGQDGRRVTDILLKQLDDILSPRGVLYLLLLRENK 184

Query: 232 KVDVVRIFESRKLFLVNA 249
             ++++  E  K   V  
Sbjct: 185 PEEIIQYLEGLKFRAVKF 202


>gi|91775778|ref|YP_545534.1| methyltransferase small [Methylobacillus flagellatus KT]
 gi|91709765|gb|ABE49693.1| methyltransferase small [Methylobacillus flagellatus KT]
          Length = 321

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 14/163 (8%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T   D     P+T      A+   L R   R V R +D+G+G+GA  + L +  P  +  
Sbjct: 112 TTQGDAIFFGPDTYRFA-RAIERHLTRARVR-VYRAVDIGSGSGAGAIMLAQRLPQAEVY 169

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVDI+ +AL +A  N +  G+      L SD   +++G FD+I+SNPP++    VD  G 
Sbjct: 170 GVDINDQALALAAINGIAAGLF-NLHWLHSDLLQALDGEFDLIISNPPFL----VDAAGR 224

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
             R         GG  G      I D     L   G   +  G
Sbjct: 225 AYRH-------GGGPLGAELSLNIVDTALARLAPGGSLLLYTG 260


>gi|71734702|ref|YP_277258.1| HemK family modification methylase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555255|gb|AAZ34466.1| modification methylase, HemK family [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 314

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLLLYTG 253


>gi|323939813|gb|EGB36015.1| methyltransferase small domain-containing protein [Escherichia coli
           E482]
          Length = 343

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D      L  +      ++LD+G+G G + +A  + SP 
Sbjct: 166 GLTVKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGSGAGVLSVAFARHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  A+E +++    NGV    +   S+ FS V+G FD+I+SNPP+       
Sbjct: 221 IRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSEVKGRFDMIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G  RHLN  G  
Sbjct: 273 ---------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 299


>gi|288937273|ref|YP_003441332.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
 gi|290512677|ref|ZP_06552043.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
           1_1_55]
 gi|288891982|gb|ADC60300.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
 gi|289775018|gb|EFD83020.1| ribosomal RNA small subunit methyltransferase C [Klebsiella sp.
           1_1_55]
          Length = 342

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++   N+ +      F  R      +D      L  +E     ++LD+G G G +   
Sbjct: 159 WGEYALDNLTIKTLPGVFS-RDG----LDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG +   D   S+ FS V G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGFAG--DVFASNVFSEVNGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   + +  G  RHLN  G  
Sbjct: 272 H---------------------DGLQTSLEAAQALIRGAVRHLNSGGEL 299


>gi|206579318|ref|YP_002240577.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
           pneumoniae 342]
 gi|226712957|sp|B5Y286|RSMC_KLEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|206568376|gb|ACI10152.1| ribosomal RNA small subunit methyltransferase C [Klebsiella
           pneumoniae 342]
          Length = 342

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++   N+ +      F  R      +D      L  +E     ++LD+G G G +   
Sbjct: 159 WGEYALDNLTIKTLPGVFS-RDG----LDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L   SP  +    D+S  A+E +++    NG +   D   S+ FS V G FD+I+SNPP+
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGFAG--DVFASNVFSEVNGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   + +  G  RHLN  G  
Sbjct: 272 H---------------------DGLQTSLEAAQALIRGAVRHLNSGGEL 299


>gi|320331548|gb|EFW87488.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330882032|gb|EGH16181.1| HemK family modification methylase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 314

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|257485641|ref|ZP_05639682.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|331011930|gb|EGH91986.1| HemK family modification methylase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 314

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|15902787|ref|NP_358337.1| hypothetical protein spr0743 [Streptococcus pneumoniae R6]
 gi|116516099|ref|YP_816227.1| methyltransferase small subunit [Streptococcus pneumoniae D39]
 gi|15458336|gb|AAK99547.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116076675|gb|ABJ54395.1| methyltransferase small domain, putative [Streptococcus pneumoniae
           D39]
          Length = 196

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  +E      +LD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLEVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 74  SLAKAY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETSGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|332360926|gb|EGJ38731.1| methyltransferase domain protein [Streptococcus sanguinis SK355]
          Length = 195

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VDI+ +AL++A+ NA  N +S      QS+ +  V G+FD ++SNPP
Sbjct: 74  SLAKAYGVA-ATMVDINQRALDLAQKNAERNQISAHI--FQSNVYEKVSGIFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVLHEVISGSYEHLTEGGDLTLVIQKKQGA 165


>gi|76800405|ref|ZP_00782027.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
           18RS21]
 gi|76584395|gb|EAO61378.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus agalactiae
           18RS21]
          Length = 177

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG     +      +  F  R     ++D      L  +       +LDLG G G + +
Sbjct: 23  LLGE----SFSFLTDAGVFSKR-----MIDYGSQVLLNSLHFEKNKSLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +ALE+AK NA  NGV    +  QS+ + ++   FD I+SNPP
Sbjct: 74  SLAK-VQGVKATMVDINTRALELAKKNATRNGVV--VEVFQSNIYENISKTFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G     +I +    +LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHSIIEESICYLNTGGSLTIVIQKKQGA 165


>gi|323443087|gb|EGB00707.1| methyltransferase small subunit [Staphylococcus aureus O46]
          Length = 202

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/246 (21%), Positives = 83/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   LKH  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLKHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + K
Sbjct: 50  --------QTFLKTHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+ E   FD I++NPP                        
Sbjct: 102 KNQKLNGI-DNVIVKESDALSAEEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|312069466|ref|XP_003137695.1| methylase [Loa loa]
 gi|307767142|gb|EFO26376.1| methylase [Loa loa]
          Length = 210

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 26/182 (14%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            ++RI   +             +EP  +T LL+D AL      +E+ +   ++++G+G+G
Sbjct: 5   PLYRITDEQK---------ESVYEPAEDTFLLLD-ALEEDKEALEQLEPNVVVEIGSGSG 54

Query: 110 AVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----G 163
            V +    L   P F     D++ KAL+  ++ A  N VS   + +Q D  S++     G
Sbjct: 55  IVSVFCQQLLRVPVFTLTT-DMNFKALQCTRTTAQLNNVS--VEAVQCDLLSALNHRLCG 111

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           L DV++ NPPY+ +   +     VR +       GG  G      +   +   L   G  
Sbjct: 112 LVDVLLFNPPYVPT-EQEATSDSVRCW------AGGPTGRGAIDRLFAQLPEILAPGGFF 164

Query: 224 SV 225
            V
Sbjct: 165 FV 166


>gi|239979327|ref|ZP_04701851.1| methyltransferase small [Streptomyces albus J1074]
 gi|291451202|ref|ZP_06590592.1| predicted protein [Streptomyces albus J1074]
 gi|291354151|gb|EFE81053.1| predicted protein [Streptomyces albus J1074]
          Length = 229

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 63/172 (36%), Gaps = 16/172 (9%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G     +    L    F P   T   V       LP     D    L++G+GTG   +  
Sbjct: 25  GEFTLLDREWELLDGVFSP---TYTPVTGLFTTWLPF---PDGGSFLEIGSGTGVTAVVA 78

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPP 173
            +E        +D+S +A+E  + NA  +G  +R   L+SD FS++  E  FD+I     
Sbjct: 79  AQEG-CASVTALDLSEEAVENTRRNAARHGAGDRVRVLRSDLFSALGPEERFDLI----- 132

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           Y  S   +     V + D   +      G   +R         LN  G   +
Sbjct: 133 YWNSNFAEPPEGFVNETDLHHAFF--DPGYDAHRRFLREAPARLNPGGRVLL 182


>gi|330986980|gb|EGH85083.1| HemK family modification methylase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 314

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|268572659|ref|XP_002649016.1| Hypothetical protein CBG21464 [Caenorhabditis briggsae]
          Length = 209

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 14/161 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGV 127
            D +EP  +T LL+D A+   +  I  R    +L++G G+G V   + +        V  
Sbjct: 16  HDIYEPAEDTFLLID-AIEKDIKEIRSRQPKLVLEIGCGSGVVSTFVNQALGGNVTSVAT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           D++  AL++    A  N    + D +++D F+ +E   G  DV++ NPPY+ +       
Sbjct: 75  DLNPHALDVTLETAKLN--DIKIDVVRTDLFAGLENLVGKVDVLLFNPPYVPTEEEPKSN 132

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +E       ++  GG  G S    +   V   L+  G+  +
Sbjct: 133 IE-------LTYAGGRTGRSTLDRLLPRVPELLSPRGVFYL 166


>gi|83589437|ref|YP_429446.1| 50S ribosomal protein L11P methyltransferase [Moorella
           thermoacetica ATCC 39073]
 gi|123524952|sp|Q2RKY6|PRMA_MOOTA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|83572351|gb|ABC18903.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 318

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 80/222 (36%), Gaps = 53/222 (23%)

Query: 44  RSLKHESIHRILGWRDFY-------NVRLTLSSDTFEPRP-ETELLVDSALAF------- 88
           R  + E      GW+ +Y        + +  + + + P P ET + +D  +AF       
Sbjct: 103 RLAREEEWAY--GWQKYYHPVRVTKGLTIKPTWEEYTPSPGETVIEIDPGMAFGTGTHPT 160

Query: 89  ---SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              SL  +E+  +   R++D+G GTG + LA  K       + +D+   A+ +A+ N   
Sbjct: 161 TILSLQALERVLKPGARVVDVGCGTGILALAAAKMGAGA-VLALDLDPVAVAVARKNIAR 219

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG +++     +D  + +EG FD++V+N                      ++        
Sbjct: 220 NGAADKVTVRNNDLLAGLEGPFDLVVAN---------------------ILA-------- 250

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                +     R L   G      I   +   V     +   
Sbjct: 251 EVILKMIPDAGRVLPAGGTLIASGISRGKAGVVEDALLANGF 292


>gi|319649125|ref|ZP_08003333.1| YbxB protein [Bacillus sp. BT1B_CT2]
 gi|317388825|gb|EFV69644.1| YbxB protein [Bacillus sp. BT1B_CT2]
          Length = 184

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 50/205 (24%)

Query: 64  RLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                S  F  R     + LL+++         E       LD+G G G + L+L  +  
Sbjct: 12  TFISDSGVFSKREVDFGSRLLIEAF-------REPDAEGDFLDVGCGYGPIGLSLAADFE 64

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 +D++ +A+E++K NA+ N + +     QSD F++VE    F  I++NPP     
Sbjct: 65  DRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANVEPAKKFASIITNPPIRA-- 121

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----V 233
                                  G      I +  + HL   G   V I   Q       
Sbjct: 122 -----------------------GKKTVHAIFEKSAEHLRPSGELWVVIQKKQGGPSAIE 158

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  +F       + +  +++ A K
Sbjct: 159 KLKELFADVEVVQKKKGYYIIKAKK 183


>gi|119585530|gb|EAW65126.1| HemK methyltransferase family member 1, isoform CRA_b [Homo
           sapiens]
          Length = 129

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR---IEKRDVVRILDLG 105
             +  ILG  DF  + L +    F PRPETE LV+  L     R   +       IL++G
Sbjct: 1   MPVQYILGEWDFQGLSLRMVPPVFIPRPETEELVEWVLEEVAQRSHAVGSPGSPLILEVG 60

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            G+GA+ L+LL + P  + + VD    A+ +   NA  
Sbjct: 61  CGSGAISLSLLSQLPQSRVIAVDKREAAISLTHENAQR 98


>gi|146307328|ref|YP_001187793.1| methyltransferase small [Pseudomonas mendocina ymp]
 gi|145575529|gb|ABP85061.1| methyltransferase small [Pseudomonas mendocina ymp]
          Length = 322

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 12/134 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            + + RI D+G G G   +   +  P  + + +DI+ +AL +   NA   G+    +  +
Sbjct: 135 HQPLRRIADIGCGAGPGAITAAQLRPGAQVLALDINERALAMTAVNARLAGIF-NLEVSK 193

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD    V+G FD+I++NPPY+    +D      R         GG  G      I D   
Sbjct: 194 SDLLRDVDGYFDLIIANPPYM----LDPQQRTYRH-------GGGKHGAGLSLAIFDTAM 242

Query: 215 RHLNKDGLCSVEIG 228
             L   G   +  G
Sbjct: 243 ERLAPGGTLLLYTG 256


>gi|224542341|ref|ZP_03682880.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524723|gb|EEF93828.1| hypothetical protein CATMIT_01520 [Catenibacterium mitsuokai DSM
           15897]
          Length = 197

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 41/205 (20%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF    +   SD      ++   VD      L  +    V  +LD+G G GA+ ++L   
Sbjct: 22  DFQGHSIDFHSDRGVFSKDS---VDFGSRTLLDTVNLEGVKSVLDVGCGYGALSISLKMV 78

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P      VD++ +A+++AK       + +     +S+ +  VE  FD+I+SNPP     
Sbjct: 79  YPDVTFDMVDVNRRAMDLAKRTIEDYHLED-MHVYESNAYDQVEKTFDMIISNPPIRA-- 135

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK------ 232
                                  G +   TI      HLNK+G   + I   Q       
Sbjct: 136 -----------------------GKNVVTTILKESYSHLNKNGRLVIVIQKKQGAPSAKK 172

Query: 233 --VDV---VRIF-ESRKLFLVNAFK 251
              +V     I   ++  +++ + K
Sbjct: 173 CMEEVFGNAEILKRNKGYYIIQSIK 197


>gi|28872664|ref|NP_795283.1| hypothetical protein PSPTO_5559 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855920|gb|AAO58978.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 324

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 18/165 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL  D+    P+T     S       +     + R  D+G GTGA  L +    P  +  
Sbjct: 115 TLDEDSVFFGPDTYRFAQSINHHL--QSTSHPIKRAADIGCGTGAGALLIAVARPDAQVY 172

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+ KAL  A++NAV  G+    +   SD  S + G FD+IV+NPPY++         
Sbjct: 173 AVDINPKALHFAQANAVVAGLQ-NMECCHSDILSGLTGNFDLIVANPPYMKDAK------ 225

Query: 186 EVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                  R +   G D L       I       L + G   +  G
Sbjct: 226 -------RRAYRHGGDALGADLSVRIVRESLDRLTRGGSLVLYTG 263


>gi|239982473|ref|ZP_04704997.1| putative methylase [Streptomyces albus J1074]
 gi|291454321|ref|ZP_06593711.1| modification methylase [Streptomyces albus J1074]
 gi|291357270|gb|EFE84172.1| modification methylase [Streptomyces albus J1074]
          Length = 132

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                +  + D ++++     G   V+V+N PY+ +  +  L  E R  +PR++LDGG D
Sbjct: 9   WRAWAEVHEGDLYAALPAVLRGRVAVLVANVPYVPTADLPLLPSEARTHEPRVALDGGDD 68

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           GL+  R +A    R L   G   VE    Q      +  +  L 
Sbjct: 69  GLAVLRRVAAEAGRWLAPGGTLLVETTGRQARTAREVLAAAGLT 112


>gi|57641442|ref|YP_183920.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           kodakarensis KOD1]
 gi|57159766|dbj|BAD85696.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           kodakarensis KOD1]
          Length = 195

 Score = 93.2 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 69/203 (33%), Gaps = 46/203 (22%)

Query: 64  RLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   +S  F        TELL++S +         +   R+LDLG G G + + +     
Sbjct: 28  KFITASGVFSFGRLDRGTELLIESMVL--------QPGWRVLDLGCGYGPIGI-VASRFV 78

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +  V  D++ +A+ IAK N   NGV    +      +  V G  FD I++NPP      
Sbjct: 79  DY-VVMTDVNRRAVSIAKKNLKINGVR-NAEVRWGSLYEPVAGEKFDSIITNPPVHA--- 133

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                                 G    R I     RHLN  G   + I   Q    ++  
Sbjct: 134 ----------------------GKEVLREIVINAPRHLNDGGYLQLVIKTKQGAKYIKSL 171

Query: 240 ESRKLFLVNA------FKDYGGN 256
                  V        ++ Y G 
Sbjct: 172 MDETFTEVRELAKGSGYRVYAGI 194


>gi|325278033|ref|ZP_08143557.1| methyltransferase small [Pseudomonas sp. TJI-51]
 gi|324096832|gb|EGB95154.1| methyltransferase small [Pseudomonas sp. TJI-51]
          Length = 317

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 55/145 (37%), Gaps = 13/145 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L     R V   +D+G GTG   L + + +   +   VDI+  AL     NA  
Sbjct: 126 QVIHDHLRHTPNR-VEHAVDIGCGTGIGALLIARAAHHAQVSAVDINPLALRYTAVNAAL 184

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            GVS       SD    V G FD+IV+NPPY+    +D      R         GG  G 
Sbjct: 185 AGVS-NISVKHSDLLDDVPGNFDLIVANPPYM----LDVGERTYRH-------GGGALGA 232

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
           +    I +     L   G   +  G
Sbjct: 233 ALSLRIVEQARERLTPGGSLLLYTG 257


>gi|153215832|ref|ZP_01950164.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124114549|gb|EAY33369.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 216

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L   +  P      +DI   A   A+ N   +  +E  +   +D 
Sbjct: 19  PTTILDIGCGTGLLSLMCAQRFPHAHITALDIEQTAYLAAEHNRQQSPWAEHIECQHADI 78

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              +    F  I+ NPPY  S        +VR      +       L H + + + + + 
Sbjct: 79  LHWLPSKRFAAIICNPPYFNSGETA--QHQVR------ATARHTISLQH-QALIERLPQL 129

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           L  DG+ S  +   +  D + + +   LF
Sbjct: 130 LEPDGVASFILPKAEGEDFIVLAKQTGLF 158


>gi|325144624|gb|EGC66923.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240013]
 gi|325205992|gb|ADZ01445.1| methyltransferase domain protein [Neisseria meningitidis
           M04-240196]
          Length = 367

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|289648530|ref|ZP_06479873.1| HemK family modification methylase [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 314

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 63/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGCGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A++NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQTNARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDAK-------- 215

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 216 -----RRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|282903129|ref|ZP_06311020.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus C160]
 gi|282596084|gb|EFC01045.1| 16S rRNA M(2)G 1207 methyltransferase [Staphylococcus aureus subsp.
           aureus C160]
          Length = 202

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 82/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                                RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFFKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+ +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNGI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|189465685|ref|ZP_03014470.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM
           17393]
 gi|189433949|gb|EDV02934.1| hypothetical protein BACINT_02046 [Bacteroides intestinalis DSM
           17393]
          Length = 235

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 16/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             E  +  +ILD+GTGTG + L L + +P  +   ++I   A   A+ N   +  + R  
Sbjct: 32  WAEVGNPQQILDIGTGTGLIALMLAQRNPLSQVTAIEIDEAAATQAEENIARSPWANRIK 91

Query: 152 TLQSDW-FSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + +D+     +  + +IVSNPPY ++++        +      ++          Y  +
Sbjct: 92  VICNDFSLFQTDNKYHLIVSNPPYFVDALNCPDKQRNMARHTRELN----------YELL 141

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG--GND--RVLLF 262
               +  L   G   + I    +  V+      KL+       +   G    RVL+ 
Sbjct: 142 FRRSAHFLEDQGRICIIIPTEAEKLVIDTAWKYKLYPSRRLHVFTKPGKPSRRVLIA 198


>gi|156973272|ref|YP_001444179.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116]
 gi|262828794|sp|A7MXM2|TRMN6_VIBHB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|156524866|gb|ABU69952.1| hypothetical protein VIBHAR_00953 [Vibrio harveyi ATCC BAA-1116]
          Length = 239

 Score = 93.2 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 57/160 (35%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +      +ILD+GTGTG + L   +  P  +   +DI   A+E AK N   +  S
Sbjct: 33  MLGAWVNCIPQNKILDIGTGTGLLALMCAQRFPSAQITALDIEITAIEAAKQNFAQSTWS 92

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     SD      E  F+ I+ NPPY  S                 +     D L H 
Sbjct: 93  DRLSLHHSDVLQFEPEHRFERIICNPPYFNSGEQSKQSQ--------RATARHTDTLQHS 144

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             + +     L  +G  S  +   +    + +   +   L
Sbjct: 145 -ALLNRCHELLTNEGTASFVLPITEGEQFITMALQQGWHL 183


>gi|319440181|ref|ZP_07989337.1| putative RNA methyltransferase [Corynebacterium variabile DSM
           44702]
          Length = 380

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 38/206 (18%)

Query: 44  RSLKHESIHRILG---------WRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRI 93
           R     ++  +LG                ++      F P R E   LVD   A  LP +
Sbjct: 126 RRTPFTALQGVLGAYQWHLNGVEVPALGEKVYPDYGVFSPTRSEYVDLVDDVAAAFLPSL 185

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    +L+LGTGTG +  A+L      +    D++ +A+  A++N    GV ER + +
Sbjct: 186 --KAGASVLELGTGTGVLA-AVLARRGAVRVTATDVNPRAVACARANLDRLGVGERCEVV 242

Query: 154 QSDWFSSVE------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++D + +V                D++V NPP++       L L +         D   D
Sbjct: 243 EADLWPAVSETTETTDAADAADAADIVVFNPPWLPGTPTSELELGIY--------DASSD 294

Query: 202 GLSHYRTIADGVSRHLNKD--GLCSV 225
            L   R     ++ HL     G   +
Sbjct: 295 AL---RRFLTELTDHLTDGGEGWLVL 317


>gi|325687971|gb|EGD29991.1| methyltransferase domain protein [Streptococcus sanguinis SK72]
 gi|327469474|gb|EGF14943.1| methyltransferase domain protein [Streptococcus sanguinis SK330]
          Length = 195

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 75/201 (37%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ ++D      L  ++     R+LD+G G G + L L K     
Sbjct: 28  LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGLTLAKAQGVA 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +DI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP         
Sbjct: 83  -ATMLDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVNGIFDHIISNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVR 237
                              G      +  G   HL + G  ++ I   Q        +  
Sbjct: 134 -------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGAPSAKSKMEA 174

Query: 238 IF-------ESRKLFLVNAFK 251
           IF       + +  +++ + K
Sbjct: 175 IFGNCEIVKKDKGYYILRSEK 195


>gi|212223247|ref|YP_002306483.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           onnurineus NA1]
 gi|212008204|gb|ACJ15586.1| ribosomal RNA small subunit methyltransferase C [Thermococcus
           onnurineus NA1]
          Length = 209

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 69/203 (33%), Gaps = 46/203 (22%)

Query: 64  RLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   +S  F        TELL++S +             R+LDLG G GA+ + +     
Sbjct: 42  KFITASGVFSFGKLDRGTELLIESMIL--------DGNWRVLDLGCGYGAIGI-VASRFV 92

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
            +  V  D++ +A+ IA+ N   N V    +      +  V G  FD I++NPP      
Sbjct: 93  EY-VVMTDVNRRAVSIARKNLKINNVR-NAEVRWGSLYEPVRGEKFDTIITNPPVHA--- 147

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                                 G    R I     RHLN  GL  + I   Q    ++  
Sbjct: 148 ----------------------GKEILREIVINAPRHLNDGGLLQLVIKTKQGAKYIKGL 185

Query: 240 ESRKLFLVNA------FKDYGGN 256
                  V        ++ Y G 
Sbjct: 186 MEEHFTEVRELAKGSGYRVYAGI 208


>gi|259047254|ref|ZP_05737655.1| methyltransferase domain protein [Granulicatella adiacens ATCC
           49175]
 gi|259036304|gb|EEW37559.1| methyltransferase domain protein [Granulicatella adiacens ATCC
           49175]
          Length = 206

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 44/182 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++LL++     S          ++LD+G G G + L+  K  P      VD++ +ALE+A
Sbjct: 47  SQLLIE-----SYEVPSSFQEGKLLDVGCGYGPMGLSFAKAYPKMHVEMVDVNERALELA 101

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           + NA  NG+ E     +S  +  +    + VI+SNPP                       
Sbjct: 102 RRNAKANGI-ENVLIHESSIYDEINAKDYSVIISNPPIRA-------------------- 140

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV------------DVVRIFESRKL 244
                G      I +    HL   G   + I   Q              +V RI   +  
Sbjct: 141 -----GKEVVHRILEEAYDHLIDGGQLVIVIQKKQGAPSAQKKMQEVFGNVERIALDKGY 195

Query: 245 FL 246
           ++
Sbjct: 196 WI 197


>gi|213968468|ref|ZP_03396611.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301386087|ref|ZP_07234505.1| hypothetical protein PsyrptM_25774 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060245|ref|ZP_07251786.1| hypothetical protein PsyrptK_09647 [Pseudomonas syringae pv. tomato
           K40]
 gi|302131987|ref|ZP_07257977.1| hypothetical protein PsyrptN_11384 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926756|gb|EEB60308.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 319

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL  D+    P+T     S       +     + R  D+G GTGA  L +    P  +  
Sbjct: 110 TLDEDSVFFGPDTYRFAQSINHHL--QSTSHPIKRAADIGCGTGAGALLIAVARPDAQVY 167

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+ KAL  A++NAV  G+        SD  S + G FD+IV+NPPY++         
Sbjct: 168 AVDINPKALHFAQANAVVAGL-HNMQCCHSDILSGLTGNFDLIVANPPYMKDAK------ 220

Query: 186 EVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                  R +   G D L       I       L + G   +  G
Sbjct: 221 -------RRAYRHGGDALGADLSVRILRESLDRLTRGGSLVLYTG 258


>gi|187477318|ref|YP_785342.1| hypothetical protein BAV0813 [Bordetella avium 197N]
 gi|115421904|emb|CAJ48424.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 379

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/226 (24%), Positives = 81/226 (35%), Gaps = 47/226 (20%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHES-----------IHRILGWRDFY----------N 62
           V+PD  L  R+   +T A                    +  +LG  +++           
Sbjct: 115 VEPDHGLSLRRAPDITAACA--AAGIPSGSNYLISLRELQGLLGAHEWHKKGVVIPALNG 172

Query: 63  VRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            R+      + P R E   LV  A     P         I D+GTGTG +   L +    
Sbjct: 173 ERIHPCYGVYSPVRGEYIDLVARAPMPEGP---------IFDIGTGTGVLAAVLARRCAQ 223

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D+  +AL  A+ N    G+S R    ++D F   EG   +IV NPP+I +    
Sbjct: 224 P-VIGTDLDPRALACARDNLARLGLSARVSLQRADLFP--EGKAALIVCNPPWIPA--KP 278

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +E   +DP              R    GVS HL   G   + I
Sbjct: 279 SSPIEYAVYDPNS---------RMLRAYLQGVSGHLLPGGEAWLII 315


>gi|227431251|ref|ZP_03913305.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227353013|gb|EEJ43185.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 211

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 33/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKE 118
           + +  T  S  F         VD      L  +EK    + ++LDLGTG G V L + K 
Sbjct: 32  HELYFTTDSGVFSKST-----VDFGTRTMLDALEKTSIPIGKVLDLGTGYGPVGLTVAKA 86

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                   VD++ +AL++A+ NA  NGV++R +  +SD ++S+   + +I+ NPP     
Sbjct: 87  Y-QRHVDMVDVNERALDLARKNAQQNGVAQRVNIFKSDVYASISDKYALILVNPPIRA-- 143

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                  G      +    + +L   G   
Sbjct: 144 -----------------------GKQVVTAMLQEAANYLQDGGKLI 166


>gi|68248563|ref|YP_247675.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           86-028NP]
 gi|81337010|sp|Q4QPN2|RSMC_HAEI8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|68056762|gb|AAX87015.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae 86-028NP]
          Length = 330

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  +   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHPTIQDLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K S   +    DI   ALE A      N +    +   SD FS +EG FD+I+SNPP+  
Sbjct: 210 KSSTNAQITMTDIHAMALESAHKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|309972854|gb|ADO96055.1| 16S rRNA m2G1207 methylase [Haemophilus influenzae R2846]
          Length = 330

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  +   +    P   +   +D+     L  I+ +   ++LDLG G G +   + 
Sbjct: 150 WKTYQHPTIQDLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVLDLGCGAGVIGSVIK 209

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K S   +    DI   ALE A      N +    +   SD FS +EG FD+I+SNPP+  
Sbjct: 210 KSSTNAQITMTDIHAMALESAHKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPF-- 265

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HLN+ G  
Sbjct: 266 -----------------------HDGIDTAYRAVTELITQAKWHLNQGGEL 293


>gi|108760593|ref|YP_633081.1| methyltransferase [Myxococcus xanthus DK 1622]
 gi|108464473|gb|ABF89658.1| methyltransferase [Myxococcus xanthus DK 1622]
          Length = 385

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 36/215 (16%)

Query: 10  FLCR-VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
             C  V G S+        +V+  +Q   +  A     K  ++  + G        L   
Sbjct: 135 LACHQVWGASTTD-----TTVVPLKQLLGMLGAAEWRRKGLAVPGLTG-------LLHPH 182

Query: 69  SDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
              + P R +   L        L  + +    R+ D+GTGTG +   +L +         
Sbjct: 183 YGVYLPTRTDYVEL--------LNSVTEVKGKRVFDIGTGTGVLSF-ILLQRGAASVQAT 233

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D   +A+  ++ NA   G+ +RF   ++D F   +G  D++V NPP+I     + +   V
Sbjct: 234 DCDSRAVACSQENAERLGLGKRFQVAEADLFP--KGTADLVVCNPPWIPEPPKNRVDRAV 291

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            D D +             R   +G+S  L   G+
Sbjct: 292 FDEDSQ-----------FLRRFLEGLSASLAPGGV 315


>gi|170023426|ref|YP_001719931.1| methyltransferase small [Yersinia pseudotuberculosis YPIII]
 gi|262828924|sp|B1JRB8|TRMN6_YERPY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|169749960|gb|ACA67478.1| methyltransferase small [Yersinia pseudotuberculosis YPIII]
          Length = 252

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 46  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 105

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 106 HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 156

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
           T+ +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 157 TLLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 214


>gi|9955209|pdb|1DUS|A Chain A, Mj0882-A Hypothetical Protein From M. Jannaschii
          Length = 194

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 40/193 (20%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++    S  F        T++LV++ +      ++K D   ILDLG G G + +AL  E 
Sbjct: 23  LKFKTDSGVFSYGKVDKGTKILVENVV------VDKDDD--ILDLGCGYGVIGIALADEV 74

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   DI+ +A+++AK N   N +       + SD + +V+   ++ I++NPP    
Sbjct: 75  KST--TXADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRA- 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G      I +     L  +G   V I   Q    + 
Sbjct: 132 ------------------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLA 167

Query: 238 IFESRKLFLVNAF 250
            +       V   
Sbjct: 168 KYXKDVFGNVETV 180


>gi|699324|gb|AAA63085.1| u471f [Mycobacterium leprae]
          Length = 125

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 171 NPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPPY+    V    L  EV  +DPR ++ GG DG++    I     R L   GL +VE  
Sbjct: 23  NPPYVPDDPVVQSILEPEVTQYDPRHAVFGGPDGMALTADIVGLAGRWLRPGGLFAVEHD 82

Query: 229 YNQKVDVVRI-FESRKLFLVNAFKDYGGNDRVLLFCR 264
            +  V  + + + +     V   +D  G  R +   R
Sbjct: 83  DSTSVPTLDLVYRTDLFDDVLTHRDLAGRPRFVTARR 119


>gi|218768234|ref|YP_002342746.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491]
 gi|121052242|emb|CAM08567.1| hypothetical protein NMA1400 [Neisseria meningitidis Z2491]
 gi|325142497|gb|EGC64901.1| methyltransferase domain protein [Neisseria meningitidis 961-5945]
 gi|325198365|gb|ADY93821.1| methyltransferase domain protein [Neisseria meningitidis G2136]
          Length = 331

 Score = 92.9 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 281

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 282 FLDKAFAQAGLRVADVLK 299


>gi|311741861|ref|ZP_07715672.1| methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311314867|gb|EFQ84773.1| methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 212

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 14/195 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  + +       EPRP T     +   +      +     +L+L  G G + LA  +  
Sbjct: 13  FDGLEIAYDQHVLEPRPWTI----AQAEWVAEAAAEVPPGPMLELFAGVGHIGLAAARRR 68

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIES 177
                  V+I   A + A  NA T G+S+  +   +   S++  +  F +I+++PP++++
Sbjct: 69  GRILV-QVEIDRWAAQFAHLNAETAGLSDLVEVRCAPVESALAPDEAFPLILADPPWVDA 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +V     +     PR+ +DGG DGL   R   + +  HL   GL  +++G  Q   V  
Sbjct: 128 ELVHQYPAD-----PRLCIDGGADGLQLVRAALEVIGAHLVTSGLAVLQVGPTQVPAVRE 182

Query: 238 IFE--SRKLFLVNAF 250
             E     L +    
Sbjct: 183 AVEGLDTGLSICEVR 197


>gi|317404647|gb|EFV85044.1| methyltransferase small [Achromobacter xylosoxidans C54]
          Length = 376

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 74/190 (38%), Gaps = 26/190 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     +D      +PR          D+GTGTG +  A+L      + +
Sbjct: 171 RIHPHYGVFSPLRGEYIDLVARTPMPR-----GSVAFDIGTGTGVLA-AVLARRGGKRVI 224

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D+  +AL  A+ N    G+S++ +  Q+D F   EG   + V NPP++ +     +  
Sbjct: 225 ATDMDPRALACARENLERLGLSKQVEVAQADLFP--EGRVSLAVCNPPWLPARPSSPVEH 282

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK--DGLCSV----EI-GYNQKVDVVRI 238
            V D D R+            R   +G++ HL    +G   +    E  G   +  ++ +
Sbjct: 283 AVYDPDSRM-----------LRGFLNGLAAHLTPSGEGWLILSDLAEHLGLRTREQLLEM 331

Query: 239 FESRKLFLVN 248
            E   L ++ 
Sbjct: 332 IEQAGLRVLE 341


>gi|300717996|ref|YP_003742799.1| S-adenosyl-L-methionine-dependent methyltransferase [Erwinia
           billingiae Eb661]
 gi|299063832|emb|CAX60952.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Erwinia billingiae Eb661]
          Length = 277

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 71/181 (39%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+GTG+G + L L + +    +   V++  +A+  A+ NA  +  ++R 
Sbjct: 71  WAPVAGAQRVLDIGTGSGLIALMLAQRTGQDVEVDAVELDEQAVGQARENAAESPWADRI 130

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q D   W  + E  + +IVSNPPY +                P  +       L+H 
Sbjct: 131 HVWQDDIVHWSKNAEQRYSLIVSNPPYFVPGTDCAS---------PERASARYTTDLTH- 180

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +       + ++G   V +  +    +V + + R   L +   D    +     RVLL
Sbjct: 181 DVLLSCAEELITEEGYFCVVLPASAGDKLVELAQQRGWHL-HCRTDISDTEMRPPNRVLL 239

Query: 262 F 262
            
Sbjct: 240 A 240


>gi|78065060|ref|YP_367829.1| methyltransferase [Burkholderia sp. 383]
 gi|77965805|gb|ABB07185.1| Methyltransferase [Burkholderia sp. 383]
          Length = 377

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RVVATDQDARALACARENVERLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + R + +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 ANRVEVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLTGLAAHLEPGGEGWLIL 313


>gi|330964404|gb|EGH64664.1| hypothetical protein PSYAC_07090 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 301

 Score = 92.9 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/165 (27%), Positives = 65/165 (39%), Gaps = 18/165 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL  D+    P+T     S       +     + R  D+G GTGA  L +    P  +  
Sbjct: 92  TLDEDSVFFGPDTYRFAQSINRHL--QSTSHPIKRAADIGCGTGAGALLIAVARPDAQVY 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            VDI+ KAL  A++NAV  G+    +   SD  S + G FD+IV+NPPY++         
Sbjct: 150 AVDINPKALHFAQANAVVAGLQ-NMECCHSDILSGLTGNFDLIVANPPYMKDAK------ 202

Query: 186 EVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                  R +   G D L       I       L   G   +  G
Sbjct: 203 -------RRAYRHGGDALGADLSVRIVRESLDRLTAGGSLVLYTG 240


>gi|290580442|ref|YP_003484834.1| hypothetical protein SmuNN2025_0916 [Streptococcus mutans NN2025]
 gi|254997341|dbj|BAH87942.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 198

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/200 (24%), Positives = 77/200 (38%), Gaps = 38/200 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG + F+       S  F     ++ ++D      L  ++  +   +LDLG G G + +
Sbjct: 23  LLG-QSFH---FLTDSGVF-----SKNMIDYGSQTLLNSLDFAEGKTLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL K         VDI+ +AL++ + NA  N VS      QSD + +V   FD I+SNPP
Sbjct: 74  ALAK-VQKLDVTMVDINNRALDLTRQNAENNEVSANI--FQSDIYENVFDSFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G     TI +G   HL ++G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHTIIEGSINHLKENGSLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFKD 252
                  E+     +   +D
Sbjct: 166 PSAKAKMENVFGNAIVLKRD 185


>gi|149245584|ref|XP_001527269.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449663|gb|EDK43919.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 220

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            +EP  ++  L+D         + K    V  +L++GTG+G V   +L+   P    +  
Sbjct: 15  VYEPSEDSFYLLDCFEDQQTYLLSKYGNRVPLVLEIGTGSGIVTTFMLQHILPQALYLAS 74

Query: 128 DISCKALEIAKSNAVTNGVSER---FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCL 183
           DI+  A  I   N +    SER    D L+ D  SS+   + DV+V NPPY+ +  +   
Sbjct: 75  DINPSAC-ITARNTIRQNCSERANFVDILRMDLASSLRTNIVDVLVFNPPYVPAEEMPIP 133

Query: 184 GLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
                + +  +  +L GG DG+     + + +   L  DG+  +     N+  +V  I  
Sbjct: 134 PANNEEGELWLDLALLGGKDGMVTTWKVLNLLQEILASDGIAYILFCARNRPDEVAEIMR 193

Query: 241 SRKL 244
           +R  
Sbjct: 194 NRGW 197


>gi|194854970|ref|XP_001968456.1| GG24496 [Drosophila erecta]
 gi|190660323|gb|EDV57515.1| GG24496 [Drosophila erecta]
          Length = 224

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/201 (22%), Positives = 84/201 (41%), Gaps = 19/201 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      +EP  ++ LL+D AL   L  +E+      ++LG+G+G +  AL K+   
Sbjct: 8   HLSLEDFEHVYEPAEDSFLLLD-ALEKDLEYLEQLQPHLCVELGSGSGVIITALAKKLAG 66

Query: 122 FKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           F   +  DI+ KA    +  A  NG   R D+++     ++     DV++ NPPY+ +  
Sbjct: 67  FSLCLATDINPKACNATRRTATRNGA--RLDSIRCSLADALRPQSVDVLLFNPPYVVTSD 124

Query: 180 VDCLGLEVRDFDPRI----------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIG 228
            +        FD             S  GG DG      +   +   L+  G+   + + 
Sbjct: 125 AELQTQ---HFDSHSESSTDRNLVFSWAGGQDGRRVTDILLKQLDDILSPRGVLYLLLLR 181

Query: 229 YNQKVDVVRIFESRKLFLVNA 249
            N+  ++++  E  +   V  
Sbjct: 182 ENKPEEIIKYLEGLEFRAVKF 202


>gi|262172262|ref|ZP_06039940.1| predicted O-methyltransferase [Vibrio mimicus MB-451]
 gi|261893338|gb|EEY39324.1| predicted O-methyltransferase [Vibrio mimicus MB-451]
          Length = 239

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+G GTG + L   +     +   +DI   A +  K N+  +  + R   LQ+D
Sbjct: 42  PPTSILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYQATKKNSENSPWANRIQCLQTD 101

Query: 157 W-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +      F  I+ NPPY  S          R             G   ++ + + + +
Sbjct: 102 VRYWHPTQRFSAIICNPPYFNSGETA--QQFARA-------TARHTGSLKHQELIECLPQ 152

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L  DG+ S  +   +    + + E   L+L
Sbjct: 153 LLESDGVASFILPKTEGDQFIALAEQAGLYL 183


>gi|332361388|gb|EGJ39192.1| methyltransferase domain protein [Streptococcus sanguinis SK1056]
          Length = 195

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 71/180 (39%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N +S   + LQS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQGVA-ATMVDINQRALDLAQKNAERNQISA--EILQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYGHLTEGGDLTLVIQKKQGA 165


>gi|307176346|gb|EFN65957.1| N(6)-adenine-specific DNA methyltransferase 1 [Camponotus
           floridanus]
          Length = 233

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 17/163 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---SPFFKGVGV 127
            + P  ++ LL+D+        +        L++G+G+G V  AL            + +
Sbjct: 16  VYNPSEDSYLLIDALEEDLQNILYATKPAICLEIGSGSGIVITALAMALKPFHNAHFIAI 75

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A    K  ++ N V    D L  +      V+  +DVI+ NPPY+ +   + L  
Sbjct: 76  DINPDACRATKRTSLINSVD--VDVLHMNLLDCIQVKNTYDVILFNPPYVVTEYEEVL-- 131

Query: 186 EVRDFDPRI---SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                + R+   +  GG +G      I   + + L+  GL  +
Sbjct: 132 -----ENRLIFKTWAGGKNGRQVMEQIFTLIPKILSNGGLFYL 169


>gi|296313663|ref|ZP_06863604.1| methyltransferase domain protein [Neisseria polysaccharea ATCC
           43768]
 gi|296839805|gb|EFH23743.1| methyltransferase domain protein [Neisseria polysaccharea ATCC
           43768]
          Length = 367

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + +A+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPRAVACARANIARLGFEKQVEICETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|254670082|emb|CBA04974.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
          Length = 367

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|171779487|ref|ZP_02920451.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282104|gb|EDT47535.1| hypothetical protein STRINF_01332 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 197

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 68/191 (35%), Gaps = 35/191 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +      S  F     ++ +VD      L  ++      +LDLG G G + ++L K    
Sbjct: 27  SFTFLTDSGVF-----SKKMVDYGSQVLLNTLDFEKGKILLDLGCGYGPLGISLAK-VQG 80

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K   VDI+ +A+++AK NA  NGV    D  QSD +  V G FD I+SNPP        
Sbjct: 81  VKPTMVDINNRAIDLAKQNAQKNGVEA--DIFQSDIYEKVNGTFDYIISNPPIRA----- 133

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFE 240
                               G     TI      +L   G  ++ I   Q         E
Sbjct: 134 --------------------GKQVVHTIISESINYLKVGGNLTIVIQKKQGAPSAKAKME 173

Query: 241 SRKLFLVNAFK 251
                 V   K
Sbjct: 174 EV-FGNVEILK 183


>gi|311070753|ref|YP_003975676.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942]
 gi|310871270|gb|ADP34745.1| ribosomal RNA methyltransferase [Bacillus atrophaeus 1942]
          Length = 201

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 74/207 (35%), Gaps = 50/207 (24%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   T  S  F  +     + LL++S         E       LD+G G G + L+L  +
Sbjct: 27  DFTFTSDSGVFSKKEVDFGSRLLIESF-------EEPEAEGDFLDVGCGYGPIGLSLASD 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
                   +D++ +A+E++  NA  NG+ E     QSD FS+V+    F  I++NPP   
Sbjct: 80  FKDRTIHMIDVNERAVELSNENAEHNGI-ENVRIYQSDLFSNVDSAQTFASIITNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +  + HL   G   + I   Q     
Sbjct: 139 -------------------------GKKVVHAIFEKSAEHLRPSGDLWIVIQKKQGGPSA 173

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              +  +F       + +  +++ A K
Sbjct: 174 IDKLKELFDEVSVVQKKKGYYIIKAKK 200


>gi|257055191|ref|YP_003133023.1| HemK-like methylase [Saccharomonospora viridis DSM 43017]
 gi|256585063|gb|ACU96196.1| HemK-related putative methylase [Saccharomonospora viridis DSM
           43017]
          Length = 218

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 18/154 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T+LLV+     +L  +  R   R+LD+GTGTGA+ +A    S       VD
Sbjct: 7   PGVYRPQDDTDLLVE-----ALSGLTLRSGDRVLDVGTGTGALAVA-AVRSGATDVTAVD 60

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +AL     NA  + +  R    ++D       G FD++++NPPY+       +    
Sbjct: 61  VSLRALAATWLNARLHRLPVRVR--RADVTERPPHGRFDLVLANPPYVPCPGKGRVSRR- 117

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                    D G DG +    +   V R L++ G
Sbjct: 118 --------WDAGPDGRAVIDPLCVAVPRLLSERG 143


>gi|170731822|ref|YP_001763769.1| methyltransferase small [Burkholderia cenocepacia MC0-3]
 gi|169815064|gb|ACA89647.1| methyltransferase small [Burkholderia cenocepacia MC0-3]
          Length = 397

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 71/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 161 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 210

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R   +      D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 211 ----ARAPLQATSLAFDIGTGTGVLAAVLASRGVE-RVVATDQDPRALACARENVARLGH 265

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + + + +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 266 AGQVEIVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 312

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 313 RGFLAGLAAHLEPGGEGWLIL 333


>gi|156935522|ref|YP_001439438.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter sakazakii
           ATCC BAA-894]
 gi|226712952|sp|A7MGA7|RSMC_ENTS8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|156533776|gb|ABU78602.1| hypothetical protein ESA_03381 [Cronobacter sakazakii ATCC BAA-894]
          Length = 342

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTF 72
           G+ S + +++    L+              L+ +      GW   Y   ++ +      F
Sbjct: 117 GVRSAEAMLEAHCPLNKVDSARRCGLYHGRLEKQPEFNADGWWGEYQVDDLTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G G G +   L   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSDLLLSTLSPHTKGKVLDVGCGAGVLAAVLASHSPKVRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NG     + + S+ FS ++G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGFEG--EVVASNVFSEIKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG        +T+     RHLN  G  
Sbjct: 273 ----DGMETSFEAAQTLIRSAVRHLNIGGEL 299


>gi|115350455|ref|YP_772294.1| methyltransferase small [Burkholderia ambifaria AMMD]
 gi|115280443|gb|ABI85960.1| methyltransferase small [Burkholderia ambifaria AMMD]
          Length = 377

 Score = 92.5 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 72/201 (35%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RIVATDQDPRALACARENIARLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R D +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 ADRVDIVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNK--DGLCSV 225
           R    G++ HL    +G   +
Sbjct: 293 RGFLAGLADHLEPRGEGWLIL 313


>gi|310778320|ref|YP_003966653.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
 gi|309747643|gb|ADO82305.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
          Length = 224

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 25/207 (12%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ILG  +     +    + F    +  +L D          + + + ++L++GTGTG + +
Sbjct: 10  ILGEVE---RDIIQKKNGFRFSIDAVILADF--------FKGKKLGKLLEIGTGTGIISI 58

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
            L       K   +++  +  E+A+ N   N + +R + +  D      G ++D ++SNP
Sbjct: 59  LLSDREEIEKITALEVQAEMAELAERNVKRNSLEKRIEVVLGDVKEMKAGNVYDYVISNP 118

Query: 173 PYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           PY+          + +     +  ++L            +     R L   G   +    
Sbjct: 119 PYMPLDGKKINLHDNKALSRHEINLNL----------EELIKNAKRLLKPRGQFFMVHRT 168

Query: 230 NQKVDVVRIFESRKLFLVNAFKDYGGN 256
            +  ++  + E     +      Y  +
Sbjct: 169 YRFAEISTVLEREGFSIKRVRFVYSDH 195


>gi|146310194|ref|YP_001175268.1| 16S ribosomal RNA m2G1207 methyltransferase [Enterobacter sp. 638]
 gi|226712951|sp|A4W687|RSMC_ENT38 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145317070|gb|ABP59217.1| 16S rRNA m(2)G 1207 methyltransferase [Enterobacter sp. 638]
          Length = 342

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 61/168 (36%), Gaps = 28/168 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G      + +      F  R      +D      L         ++LD+G G G +   L
Sbjct: 160 GEYQLDGLTIKTLPGVFS-RDG----LDVGSQLLLSTFTPHTKGKVLDVGCGAGVLSAVL 214

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
              SP  +    D+S  A+E +++    NG+    D   S+ FS V G FD+I+SNPP+ 
Sbjct: 215 ASHSPKVRLTLSDVSAPAVEASRATLAANGLEG--DVFASNVFSEVTGRFDIIISNPPFH 272

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                DG    L   +T+  G  RHL   G  
Sbjct: 273 ---------------------DGMETSLEAAQTLIRGAVRHLGSGGEL 299


>gi|22125188|ref|NP_668611.1| hypothetical protein y1288 [Yersinia pestis KIM 10]
 gi|21958052|gb|AAM84862.1|AE013731_7 putative enzyme [Yersinia pestis KIM 10]
          Length = 252

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 46  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 105

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 106 HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 156

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 157 ALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 214


>gi|45442295|ref|NP_993834.1| hypothetical protein YP_2513 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597215|ref|YP_071406.1| hypothetical protein YPTB2899 [Yersinia pseudotuberculosis IP
           32953]
 gi|149365399|ref|ZP_01887434.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125]
 gi|186896312|ref|YP_001873424.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+]
 gi|218929781|ref|YP_002347656.1| hypothetical protein YPO2709 [Yersinia pestis CO92]
 gi|229838272|ref|ZP_04458431.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895532|ref|ZP_04510703.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides A]
 gi|229898836|ref|ZP_04513981.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229901610|ref|ZP_04516732.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|81638822|sp|Q667U2|TRMN6_YERPS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|123776977|sp|Q74SR9|TRMN6_YERPE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828876|sp|B2KA56|TRMN6_YERPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|45437159|gb|AAS62711.1| SAM-dependent methyltransferases [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51590497|emb|CAH22137.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115348392|emb|CAL21328.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149291812|gb|EDM41886.1| hypothetical protein YPE_0554 [Yersinia pestis CA88-4125]
 gi|186699338|gb|ACC89967.1| methyltransferase small [Yersinia pseudotuberculosis PB1/+]
 gi|229681539|gb|EEO77633.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Nepal516]
 gi|229688384|gb|EEO80455.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694638|gb|EEO84685.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701338|gb|EEO89366.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis Pestoides A]
 gi|320016082|gb|ADV99653.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 252

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 46  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 105

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 106 HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 156

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 157 ALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 214


>gi|302532185|ref|ZP_07284527.1| methyltransferase [Streptomyces sp. C]
 gi|302441080|gb|EFL12896.1| methyltransferase [Streptomyces sp. C]
          Length = 223

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 16/184 (8%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           RL      + P+ +T +L+      +L R   R    ++++GTGT    LAL   +    
Sbjct: 9   RLVTLPGVYRPQADTRMLL-----GALAREPLRPGAEVVEIGTGT--GALALRAAARGAD 61

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDC 182
              VD++  A+  A+ N+    +  R   L  D+ +   G  FD++++NPPY+      C
Sbjct: 62  VTAVDVAWSAVLAARLNSWRQRL--RLRVLHGDFAARTRGRRFDLVLANPPYVP-----C 114

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFES 241
               V     R + D G DG +    I       L   G+  +   G     + V +   
Sbjct: 115 PDPAVPTSGSRRAWDAGRDGRAVIDRICAAAPGLLRPGGVLLMVHSGMCGAQETVALLAR 174

Query: 242 RKLF 245
             L 
Sbjct: 175 HGLT 178


>gi|289177356|gb|ADC84602.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium animalis
           subsp. lactis BB-12]
          Length = 255

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 82  VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L       +    LDLG G GA+ LAL  ESP      VD++ +A+E+A+SN
Sbjct: 95  VDLGTSVLLRHAPMPPLEGTFLDLGCGWGAIALALALESPEATVYAVDVNERAIELARSN 154

Query: 141 AVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A  NG       + +   + V G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 155 AEANGCGN----IHAGTAAVVPGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 208

Query: 199 GIDGLSHYRT-----IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               L   R      +   ++ HL        E+G        +   S+   +++  K
Sbjct: 209 HAY-LVVQRNLGSDSLIPWLAEHLGDG----YEVG--------KYASSKGYRVIDVHK 253


>gi|325128362|gb|EGC51246.1| methyltransferase domain protein [Neisseria meningitidis N1568]
          Length = 331

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 30/198 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV----- 236
            +  E   +DP  +                   +HLN DG   + I  +    +      
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLIIS-DLAEHLHLRPSD 281

Query: 237 ---RIFESRKLFLVNAFK 251
              + F    L + +  K
Sbjct: 282 FLDKAFAQAGLRVADVLK 299


>gi|325967616|ref|YP_004243808.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta
           moutnovskia 768-28]
 gi|323706819|gb|ADY00306.1| ribosomal RNA small subunit methyltransferase C [Vulcanisaeta
           moutnovskia 768-28]
          Length = 198

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 32/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +   L+   F     +   VD+        +   +   ILD+G G G + +   K +P
Sbjct: 25  FPLTFVLAPGVF-----SSEYVDAGTRLLAENMVIMNDWDILDMGCGYGVLGIVAAKLAP 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             K V VDI+  A+++   N   N VS   +   SD +S+V+G +F+ I+SNPP      
Sbjct: 80  RGKVVMVDINKLAVKLTAINIKINRVS-NAEVRLSDLYSAVQGEMFNTIISNPPITA--- 135

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                 GL   + +  G   HL   GL  +
Sbjct: 136 ----------------------GLDVNKRLIIGAKDHLKPGGLLQI 159


>gi|253565583|ref|ZP_04843038.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945862|gb|EES86269.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 237

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG V L L +       + ++I   A + A  N   +    R +
Sbjct: 32  WTPVESSARILDIGTGTGLVALMLAQRC-SASVIALEIDGTAAQQAAENITRSPWGSRIE 90

Query: 152 TLQSDWF----SSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D+      +    +D IVSNPPY    +                      D LS Y
Sbjct: 91  VVCQDFRLYSNKNNSLKYDTIVSNPPYFTDSLKCPDSQRNTARH---------NDNLS-Y 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +  GVS  L+ +G  +V I  +       I  S+ L+
Sbjct: 141 EELLKGVSNLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|60681874|ref|YP_212018.1| hypothetical protein BF2394 [Bacteroides fragilis NCTC 9343]
 gi|81315061|sp|Q5LCS1|TRMN6_BACFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|60493308|emb|CAH08092.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 237

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG V L L +       + ++I   A + A  N   +    R +
Sbjct: 32  WTPVESSARILDIGTGTGLVALMLAQRC-SASVIALEIDGTAAQQAAENITRSPWGSRIE 90

Query: 152 TLQSDWF----SSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D+      +    +D IVSNPPY    +                      D LS Y
Sbjct: 91  VVCQDFRLYSNKNNSLKYDTIVSNPPYFTDSLKCPDSQRNTARH---------NDNLS-Y 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +  GVS  L+ +G  +V I  +       I  S+ L+
Sbjct: 141 EELLKGVSNLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|195386848|ref|XP_002052116.1| GJ23471 [Drosophila virilis]
 gi|194148573|gb|EDW64271.1| GJ23471 [Drosophila virilis]
          Length = 224

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 85/193 (44%), Gaps = 15/193 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGV 127
              +EP  ++ LL+D AL   L  ++K      +++G+G+G +  AL K        +  
Sbjct: 15  EHVYEPAEDSFLLLD-ALESDLKFLDKLQPRLCVEIGSGSGIIITALAKHFAHTSICLAT 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD----- 181
           DI+ +A    K  A  NG   R D+++ +  +++     D+++ NPPY+ +   +     
Sbjct: 74  DINPRACNATKRTASRNGA--RLDSVRCNLAAALRRRSVDLLLFNPPYVVTSDEELHCQT 131

Query: 182 CLGLEVRDFDPRISLD----GGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVV 236
            +  +  +   + +L     GG DG      + + +   L+  G+   + +  N+  +++
Sbjct: 132 LMSDQAANSATQRNLVYSWAGGRDGRRVIDILLEQLEDILSPSGVLYLLLLRENKPDEII 191

Query: 237 RIFESRKLFLVNA 249
           +   + K   V  
Sbjct: 192 KQLANLKFKAVKY 204


>gi|260596377|ref|YP_003208948.1| 16S ribosomal RNA m2G1207 methyltransferase [Cronobacter turicensis
           z3032]
 gi|260215554|emb|CBA27754.1| Ribosomal RNA small subunit methyltransferase C [Cronobacter
           turicensis z3032]
          Length = 342

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 77/211 (36%), Gaps = 31/211 (14%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTF 72
           G+ S + +++    L+              L+ +      GW   Y    + +      F
Sbjct: 117 GVRSAEAMLEAYCPLNKIDSARRCGLYHGRLEKQPEFNADGWWGEYQVDELTIKTLPGVF 176

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
             R      +D      L  +      ++LD+G GTG +   L   SP  +    D+S  
Sbjct: 177 S-RDG----LDVGSDLLLSTLSPHTKGKVLDVGCGTGVLAAVLASHSPKVRLTLCDVSAP 231

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+E +++    NG     + + S+ FS ++G FD+I+SNPP+                  
Sbjct: 232 AVEASRATLAANGFEG--EVIASNVFSEIKGRFDMIISNPPFH----------------- 272

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               DG        +T+     RHLN  G  
Sbjct: 273 ----DGMETSFEAAQTLIRSAVRHLNIGGEL 299


>gi|262831172|sp|B2VI36|TRMN6_ERWT9 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 70/180 (38%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R+LD+G+G+G + L L + +    +   V++  +A   A+ N   +  + R 
Sbjct: 39  WAPVTSVKRVLDIGSGSGLIALMLAQRTSEPVQIDAVELDEEAATQAQENVAASPWAHRV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q+D   W    E  + +IVSNPPY                 P  +      GL+H  
Sbjct: 99  HVQQADVVEWAQRCEHSYSLIVSNPPYFSPGSQCAS--------PERTTARYTTGLTH-E 149

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLLF 262
            + D   + +++DG   V +  +    ++     R   L     D   ND     RVLL 
Sbjct: 150 MLLDCAEKLIDEDGFFCVILPASAGSKLLEQALQRGWHL-RFRTDIADNDTRPANRVLLA 208


>gi|52078600|ref|YP_077391.1| hypothetical protein BL02799 [Bacillus licheniformis ATCC 14580]
 gi|52783962|ref|YP_089791.1| YbxB [Bacillus licheniformis ATCC 14580]
 gi|52001811|gb|AAU21753.1| hypothetical protein with SAM binding motif [Bacillus licheniformis
           ATCC 14580]
 gi|52346464|gb|AAU39098.1| YbxB [Bacillus licheniformis ATCC 14580]
          Length = 201

 Score = 92.5 bits (229), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 68/198 (34%), Gaps = 48/198 (24%)

Query: 64  RLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
                S  F  R     + LL+++         E       LD+G G G + L+L  +  
Sbjct: 29  TFISDSGVFSKREVDFGSRLLIEAF-------REPDAEGDFLDVGCGYGPIGLSLAADFE 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 +D++ +A+E++K NA+ N + +     QSD F++VE    F  I++NPP     
Sbjct: 82  DRMVHMIDVNERAVELSKENALNNQI-DNIKIYQSDLFANVEPAKKFASIITNPPIRA-- 138

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----V 233
                                  G      I +  + HL   G   V I   Q       
Sbjct: 139 -----------------------GKKTVHAIFEKSAEHLRPSGELWVVIQKKQGGPSAIE 175

Query: 234 DVVRIFESRKLFLVNAFK 251
            +  +F       V   +
Sbjct: 176 KLKELFA-----DVEVVQ 188


>gi|255085917|ref|XP_002508925.1| predicted protein [Micromonas sp. RCC299]
 gi|226524203|gb|ACO70183.1| predicted protein [Micromonas sp. RCC299]
          Length = 174

 Score = 92.1 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 15/179 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-----KESPFFKGV 125
            +EP  ++ LLVD+ +A    R+        L++G+GTG V  +            F+  
Sbjct: 1   VYEPAEDSFLLVDTLVAEWDARLANDPPRCALEVGSGTGYVIASAAVLMRDSGLDDFRCH 60

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVD 181
             D++  A+   ++ A  +GV +    +Q D        + G  D+++ NPPY+ +    
Sbjct: 61  ATDVNPDAVACTRATADAHGVGDYVTVIQCDLLGPLRERLRGKVDLLLFNPPYVLTP--- 117

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVRIF 239
               EV       +  GG DG      +   V+  L   G    + +  N+  DV  I 
Sbjct: 118 --SEEVAAGGIAAAWAGGKDGREVLDRLLPDVADVLAPGGTFLLLLLHDNKPHDVAEIL 174


>gi|254246478|ref|ZP_04939799.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
 gi|124871254|gb|EAY62970.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
          Length = 434

 Score = 92.1 bits (228), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 198 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 247

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 248 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RIVATDQDPRALACARENVARLGH 302

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + + + +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 303 AGQVEIVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 349

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 350 RGFLAGLAAHLEPGGEGWLIL 370


>gi|163858002|ref|YP_001632300.1| putative methylase [Bordetella petrii DSM 12804]
 gi|163261730|emb|CAP44032.1| putative methylase [Bordetella petrii]
          Length = 376

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 30/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  +       N R+      F P R E   LV      +   +         D
Sbjct: 156 RKKGVPIAAL-------NDRIHPHYGVFSPVRGEYIDLV------ARAPLPGGQPALAYD 202

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTGTG +  A+L      + V  D   +AL  A+ N    G+ E  + +Q+D F   +G
Sbjct: 203 IGTGTGVLA-AVLARRGVRRIVATDQDPRALACARENLARLGLHESVELMQADLFP--DG 259

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
             D++V NPP++ +       +E   +DP              R    G++ HL     G
Sbjct: 260 RADLVVCNPPWLPAR--PSAPVEYAIYDPDS---------RMLRGFLQGLAAHLAPGGEG 308

Query: 222 LCSV 225
              +
Sbjct: 309 WLIM 312


>gi|21282225|ref|NP_645313.1| hypothetical protein MW0496 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485406|ref|YP_042627.1| hypothetical protein SAS0499 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297208745|ref|ZP_06925173.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300912835|ref|ZP_07130277.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|21203661|dbj|BAB94361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243849|emb|CAG42274.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886690|gb|EFH25595.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300885939|gb|EFK81142.1| methyltransferase domain protein [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 202

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 82/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   NG+       +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKINGIDNAI-VKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|330503343|ref|YP_004380212.1| methyltransferase small [Pseudomonas mendocina NK-01]
 gi|328917629|gb|AEB58460.1| methyltransferase small [Pseudomonas mendocina NK-01]
          Length = 322

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 12/134 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            + + RI D+G G G   +   +  P  + + +DI+ KAL +   NA   G+       +
Sbjct: 135 NQPLRRIADIGCGAGPGAITAAQLRPGAEVMALDINHKALAMTAVNARQAGIY-NLRVQR 193

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD    V G FD+I++NPPY+    +D      R         GG  G      I D   
Sbjct: 194 SDLLRDVSGQFDLIIANPPYM----LDSQQRTYRH-------GGGKHGAGLSLAIFDTAM 242

Query: 215 RHLNKDGLCSVEIG 228
             L   G   +  G
Sbjct: 243 ERLAPGGTLLLYTG 256


>gi|160882029|ref|YP_001560997.1| methyltransferase type 11 [Clostridium phytofermentans ISDg]
 gi|160430695|gb|ABX44258.1| Methyltransferase type 11 [Clostridium phytofermentans ISDg]
          Length = 256

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 75/170 (44%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +I+  +    LD+GTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 43  MDAVLLSGFAKIKPEEST--LDMGTGTGIIPILLAGKTKGKHFTGLEIQEESADMARRSV 100

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV---IVDCLGLEVRDFDPRI 194
           + N + +R + ++ D   + +    G FDV+  NPPY+ +    +   +   +   +   
Sbjct: 101 LYNDLQDRIEIVKGDIKETSKIFGGGSFDVVTCNPPYMNNQHGLVNPTMPKAIARHEILC 160

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           SL            +    ++ L  +G   +    ++ V++  I    KL
Sbjct: 161 SL----------EDVIREAAKVLKPNGRFYMVHRPHRLVEIFSIMRQYKL 200


>gi|265763915|ref|ZP_06092483.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256523|gb|EEZ27869.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 237

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 16/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG V L L +       + ++I  KA + A  N   +    R +
Sbjct: 32  WTPVESSARILDIGTGTGLVALMLAQRC-SASVIALEIDGKAAQQAAENITRSPWGSRIE 90

Query: 152 TLQSDWF----SSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D+      +    +D IVSNPPY    +                      D LS Y
Sbjct: 91  VVCQDFRLYSNKNNSLKYDTIVSNPPYFTDSLKCPDSQRNTARH---------NDNLS-Y 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +  GVS  L+ +G  +V I  +       I  S+ L+
Sbjct: 141 EELLKGVSNLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|134094899|ref|YP_001099974.1| hypothetical protein HEAR1692 [Herminiimonas arsenicoxydans]
 gi|133738802|emb|CAL61849.1| Conserved hypothetical protein, putative SAM-dependent
           methyltransferase [Herminiimonas arsenicoxydans]
          Length = 373

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 21/153 (13%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTGTG +  ALL      K +  D   +AL  A+ N     + +R D +++D F    
Sbjct: 200 DIGTGTGVIA-ALLAHRGVAKVIATDQDARALACARENMTRLDMRDRVDVIEADLFPP-- 256

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-- 220
           G   +IV NPP++ +     +   + D D R+            R   +G++ HL     
Sbjct: 257 GKAALIVCNPPWLPARPNSSIEHAIYDPDSRM-----------LRGFLNGLAAHLEPKGE 305

Query: 221 GLCSV----EI-GYNQKVDVVRIFESRKLFLVN 248
           G   +    E  G   +  ++++     L ++ 
Sbjct: 306 GWLILSDLAEHLGLRSREALLQMIADAGLKVIK 338


>gi|108808437|ref|YP_652353.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua]
 gi|108811360|ref|YP_647127.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516]
 gi|145598846|ref|YP_001162922.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F]
 gi|153950132|ref|YP_001400108.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162420057|ref|YP_001607926.1| hypothetical protein YpAngola_A3602 [Yersinia pestis Angola]
 gi|165925329|ref|ZP_02221161.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937024|ref|ZP_02225589.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008289|ref|ZP_02229187.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166212275|ref|ZP_02238310.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167398816|ref|ZP_02304340.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167421141|ref|ZP_02312894.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167470538|ref|ZP_02335242.1| hypothetical protein YpesF_22287 [Yersinia pestis FV-1]
 gi|294504500|ref|YP_003568562.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003]
 gi|123072696|sp|Q1C564|TRMN6_YERPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|123373349|sp|Q1CKF3|TRMN6_YERPN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828868|sp|A7FFT0|TRMN6_YERP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828901|sp|A9R3Z3|TRMN6_YERPG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828911|sp|A4TKY7|TRMN6_YERPP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|108775008|gb|ABG17527.1| hypothetical protein YPN_1197 [Yersinia pestis Nepal516]
 gi|108780350|gb|ABG14408.1| hypothetical protein YPA_2443 [Yersinia pestis Antiqua]
 gi|145210542|gb|ABP39949.1| hypothetical protein YPDSF_1562 [Yersinia pestis Pestoides F]
 gi|152961627|gb|ABS49088.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162352872|gb|ABX86820.1| methyltransferase family protein [Yersinia pestis Angola]
 gi|165914887|gb|EDR33499.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165922936|gb|EDR40087.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992671|gb|EDR44972.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206206|gb|EDR50686.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166960630|gb|EDR56651.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051320|gb|EDR62728.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|262362508|gb|ACY59229.1| hypothetical protein YPD4_2322 [Yersinia pestis D106004]
 gi|262366487|gb|ACY63044.1| hypothetical protein YPD8_2369 [Yersinia pestis D182038]
 gi|294354959|gb|ADE65300.1| hypothetical protein YPZ3_2390 [Yersinia pestis Z176003]
          Length = 248

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 42  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 102 HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 153 ALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 210


>gi|53713594|ref|YP_099586.1| putative RNA methyltransferase [Bacteroides fragilis YCH46]
 gi|81825000|sp|Q64TX7|TRMN6_BACFR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|52216459|dbj|BAD49052.1| putative RNA methyltransferase [Bacteroides fragilis YCH46]
          Length = 237

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 16/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG V L L +       + ++I  KA + A  N   +    R +
Sbjct: 32  WTPVESSARILDIGTGTGLVALMLAQRC-SASVIALEIDGKAAQQAAENITRSPWGSRIE 90

Query: 152 TLQSDWF----SSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D+      +    +D IVSNPPY    +                      D LS Y
Sbjct: 91  VVCQDFRLYSNKNNSLKYDTIVSNPPYFTDSLKCPDSQRNTARH---------NDNLS-Y 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +  GVS  L+ +G  +V I  +       I  S+ L+
Sbjct: 141 EELLKGVSNLLSPNGTFTVVIPMDASDSFKDIASSQGLY 179


>gi|282880314|ref|ZP_06289028.1| methyltransferase small domain protein [Prevotella timonensis CRIS
           5C-B1]
 gi|281305816|gb|EFA97862.1| methyltransferase small domain protein [Prevotella timonensis CRIS
           5C-B1]
          Length = 233

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 10/157 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GTGTG + L + +  P  + V +DI C+A + A  N  T+  ++R      
Sbjct: 34  QGGQRILDVGTGTGLIALMMAQRYPQARIVAIDIDCEACKQAAENVATSPFADRIAVDNV 93

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                +    FD IV+NPPY     +D L    R+ D + +L      L  Y+ +  GV 
Sbjct: 94  PLQQLNDTEEFDAIVTNPPYF----IDSL----RNPDEQKALARHACSL-PYKDLCKGVQ 144

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             L+  G+ SV +  +     V       L+L   +K
Sbjct: 145 LLLSSRGIFSVVLPTDNMEKFVAEAAFAGLYLYKQYK 181


>gi|110834447|ref|YP_693306.1| hypothetical protein ABO_1586 [Alcanivorax borkumensis SK2]
 gi|123050454|sp|Q0VP64|RSMC_ALCBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|110647558|emb|CAL17034.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 325

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 29/150 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  ++         +++D+G G G + + L +    ++  GVD+S  A+  +  +   NG
Sbjct: 175 LLQAMEGHNLGKPGKVIDMGCGAGVISVWLARH--GWQVQGVDVSASAVTASTESLARNG 232

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  R   +  D FS ++G  D++V+NPP+ +                             
Sbjct: 233 LQGRI--MGGDLFSPIQGRVDMVVTNPPFHDRRQRTT---------------------DI 269

Query: 206 YRTIADGVSRHLNKDGLCSV----EIGYNQ 231
            R +      +L   G+  +    E+ Y Q
Sbjct: 270 TRRLIAEAPTYLKPGGVLWLVANRELPYVQ 299


>gi|15669072|ref|NP_247877.1| hypothetical protein MJ_0882 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2842581|sp|Q58292|Y882_METJA RecName: Full=Putative protein methyltransferase MJ0882
 gi|1499712|gb|AAB98886.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 197

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 42/194 (21%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++    S  F        T++LV++ +      ++K D   ILDLG G G + +AL  E 
Sbjct: 26  LKFKTDSGVFSYGKVDKGTKILVENVV------VDKDDD--ILDLGCGYGVIGIALADEV 77

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   DI+ +A+++AK N   N +       + SD + +V+   ++ I++NPP    
Sbjct: 78  KST--TMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPIRA- 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVV 236
                                   G      I +     L  +G   V I   Q    + 
Sbjct: 135 ------------------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLA 170

Query: 237 RIFESRKLFLVNAF 250
           +  +      V   
Sbjct: 171 KYMKDV-FGNVETV 183


>gi|116619371|ref|YP_821527.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
 gi|116222533|gb|ABJ81242.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
          Length = 519

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 15/136 (11%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +  + +     +LD+GTG+G   L   + +      G DI+ ++++ A+ N   NG+   
Sbjct: 170 MSTLPEMPCDALLDVGTGSGIAALDGARYARHA--WGTDIAARSVQFAEFNRRLNGIQ-N 226

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              LQ D +  VEG  FD IV++PPY+           VR  +  I  DGG DG    R 
Sbjct: 227 ATMLQGDLYVPVEGLTFDRIVAHPPYVP----------VRKNE-LIFRDGGEDGEQILRR 275

Query: 209 IADGVSRHLNKDGLCS 224
           I +G+ R L   G   
Sbjct: 276 IVEGLPRFLRPGGRFY 291


>gi|325132584|gb|EGC55277.1| methyltransferase domain protein [Neisseria meningitidis M6190]
 gi|325208172|gb|ADZ03624.1| methyltransferase domain protein [Neisseria meningitidis NZ-05/33]
          Length = 367

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 160 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 212 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 270 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 304


>gi|15612687|ref|NP_240990.1| hypothetical protein BH0124 [Bacillus halodurans C-125]
 gi|10172736|dbj|BAB03843.1| BH0124 [Bacillus halodurans C-125]
          Length = 201

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 77/207 (37%), Gaps = 49/207 (23%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++ + T     F  +     + LL+++   F  P IE      +LD+G G G + ++L +
Sbjct: 26  HSFQFTTDRGVFSKQEVDFGSRLLIET---FQFPEIEGD----VLDVGCGYGPIGISLAR 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
           +        VD++ +A+++AK NA  N V       +SD F  V+   F  IV+NPP   
Sbjct: 79  DGGERSVHMVDVNERAIDLAKRNATANHVK-NVVVYRSDLFQQVQDRQFAAIVTNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      + +    +L  +G   + I   Q     
Sbjct: 138 -------------------------GKRVVHQLFEDARDYLLSNGELWIVIQKKQGAPST 172

Query: 233 --------VDVVRIFESRKLFLVNAFK 251
                    +V  + + +  F++ A +
Sbjct: 173 LDKLHNLYEEVEVVTKKKGYFIIRAKR 199


>gi|289773570|ref|ZP_06532948.1| methylase [Streptomyces lividans TK24]
 gi|289703769|gb|EFD71198.1| methylase [Streptomyces lividans TK24]
          Length = 220

 Score = 92.1 bits (228), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 72/194 (37%), Gaps = 16/194 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             +V   +    + P+ +T LL     A +L          +LD+GT  G+  LAL    
Sbjct: 1   MGSVNFMVLPGVYAPQEDTALL-----AGALSDESLPPGAAVLDVGT--GSGALALAAAG 53

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
              +   VD+S +A+  A+ NA   G+  R      + F+ V G  FD++++NPPY+ + 
Sbjct: 54  RGGRVTAVDVSWRAVCAARLNAARAGL--RIRVRHGNLFTPVRGESFDLVLANPPYVPAP 111

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVR 237
                           + D G DG      I   V R L   G+  +     +       
Sbjct: 112 ATGRRPRGAAR-----AWDAGHDGRMVLDRICLEVPRLLRPGGVLLLVQSALSDPARTEA 166

Query: 238 IFESRKLFLVNAFK 251
           +     L      +
Sbjct: 167 LLREAGLKAAVTRR 180


>gi|325297717|ref|YP_004257634.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
           DSM 18170]
 gi|324317270|gb|ADY35161.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides salanitronis
           DSM 18170]
          Length = 252

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 14/159 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            +  R    +LD+GTG+G + L + +     +  G+DI   A+  A  NA+ +  S R  
Sbjct: 49  WVSLRQARNVLDIGTGSGLIALMIAQRC-QAQVTGIDIDSDAIGQAGENALASPWSGRIR 107

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVI--VDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             Q+D  +   G++D IVSNPPY    +   D      R  +              +  +
Sbjct: 108 FCQADAGAFQGGVYDTIVSNPPYFRERVHCPDGQRNAARHTESLT-----------FECL 156

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            D V+R +++DG  SV +        + +   R L+L+ 
Sbjct: 157 LDAVARLMSEDGSFSVILPAEAGERFITLAAERHLYLLR 195


>gi|319946685|ref|ZP_08020919.1| methyltransferase domain protein [Streptococcus australis ATCC
           700641]
 gi|319746733|gb|EFV98992.1| methyltransferase domain protein [Streptococcus australis ATCC
           700641]
          Length = 197

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 81/236 (34%), Gaps = 54/236 (22%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +S       PD+  D  +   +               +LG R    ++    +  F    
Sbjct: 1   MSKMYYDEHPDAQHDIHELDVV---------------LLGER----MKFLTDAGVF---- 37

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            ++ ++D      L  +  +    +LD+G G G + L+L+K         VD++ +AL++
Sbjct: 38  -SKKMIDFGSQVLLSCLSFQQGETVLDVGCGYGPLGLSLVKAQ-GIHATMVDVNTRALDL 95

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NA  N V  +    QS+ +  VEG FD I+SNPP                       
Sbjct: 96  AQKNADLNQVEAKI--FQSNVYDQVEGSFDHIISNPPIRA-------------------- 133

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
                G      +  G   HLN  G  ++ I   Q         E          K
Sbjct: 134 -----GKKVVHQVLSGSFDHLNPGGDLTIVIQKKQGAPSAKAKMEEV-FGNCEILK 183


>gi|195978059|ref|YP_002123303.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225868610|ref|YP_002744558.1| methyltransferase [Streptococcus equi subsp. zooepidemicus]
 gi|225870431|ref|YP_002746378.1| methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|195974764|gb|ACG62290.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225699835|emb|CAW93681.1| putative methyltransferase [Streptococcus equi subsp. equi 4047]
 gi|225701886|emb|CAW99374.1| putative methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 209

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 69/191 (36%), Gaps = 35/191 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +      S  F  R     +VD      L  ++ ++  R+LDLG G G + L+L K    
Sbjct: 38  SFTFLTDSGVFSKR-----MVDFGSQVLLNTLDFQEGDRLLDLGCGYGPLGLSLAKAQ-G 91

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VDI+ +A+ +AK NA +N V       QS+ +  V G F+ I+SNPP        
Sbjct: 92  VEATLVDINHRAVGLAKQNAESNQVEA--TIFQSNLYDGVTGTFEHIISNPPIRA----- 144

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFE 240
                               G      I +     L K G  +V I   Q         E
Sbjct: 145 --------------------GKKVVHEIIEKSIDFLTKGGDLTVVIQKKQGAPSAKDKME 184

Query: 241 SRKLFLVNAFK 251
           +     V   K
Sbjct: 185 AV-FGNVTILK 194


>gi|167423200|ref|ZP_02314953.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167057370|gb|EDR67116.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
          Length = 248

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 42  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 102 HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 153 ALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 210


>gi|325696648|gb|EGD38537.1| methyltransferase domain protein [Streptococcus sanguinis SK160]
          Length = 195

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 39/199 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     ++LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFETGEQVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N +S   D  QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQ-GVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E+         K
Sbjct: 166 PSAKSKMEAV-FSNCEIVK 183


>gi|324993041|gb|EGC24961.1| methyltransferase domain protein [Streptococcus sanguinis SK405]
 gi|324995650|gb|EGC27562.1| methyltransferase domain protein [Streptococcus sanguinis SK678]
 gi|327461309|gb|EGF07640.1| methyltransferase domain protein [Streptococcus sanguinis SK1]
 gi|327473947|gb|EGF19360.1| methyltransferase domain protein [Streptococcus sanguinis SK408]
          Length = 195

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 73/199 (36%), Gaps = 39/199 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     ++LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAGEQVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N +S   D  QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAQ-GVTATMVDINQRALDLAQKNAERNQISA--DIFQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLTEGGDLTLVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E+         K
Sbjct: 166 PSAKSKMEAV-FSNCEIVK 183


>gi|307595644|ref|YP_003901961.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550845|gb|ADN50910.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 198

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 32/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +   L+   F     +   VD+        +   +   ILD+G G G + +   K +P
Sbjct: 25  FPLTFVLAPGVF-----SSEDVDAGTRLLAENMVIMNDWDILDMGCGYGVLGIVAAKLAP 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V VDI+  A+++A  N   N VS   +   SD +++V+G  F+ I+SNPP      
Sbjct: 80  RGRVVMVDINKLAVKLAAINIKINRVS-NAEVRLSDLYNAVQGEKFNTIISNPPITA--- 135

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                 GL   R +      HL   GL  +
Sbjct: 136 ----------------------GLDLNRRLIIEAKNHLKPGGLLQI 159


>gi|226309668|ref|YP_002769562.1| hypothetical protein BBR47_00810 [Brevibacillus brevis NBRC 100599]
 gi|226092616|dbj|BAH41058.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 255

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 25/190 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +++  S + F    +  LL   A              ++LD+ TG GA+ L +   +P
Sbjct: 21  HEMKIIQSHEVFCFSMDAVLLARFA--------SVPKRGKVLDMCTGNGAIPLIMTTRTP 72

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE 176
                G++I  +   +A  N   NG++ER      D   +V     G FD+I  NPPY+ 
Sbjct: 73  EASFDGIEIQERLFSMASRNVTLNGLNERITMHHGDVKDAVSLFGHGNFDLITCNPPYMP 132

Query: 177 SVIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +   +    E   +   +  +SL            +    S+ L   G  ++     + +
Sbjct: 133 ATSGEKNISEHFAIARHEIMLSL----------EDVIRVGSQLLKNGGKLALVHRSTRLI 182

Query: 234 DVVRIFESRK 243
           D+V +     
Sbjct: 183 DIVSLMRQYG 192


>gi|239618491|ref|YP_002941813.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
 gi|239507322|gb|ACR80809.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
          Length = 204

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 63/181 (34%), Gaps = 36/181 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +    S  F         +D A    +      +  R+LDLG G G + + L KE+P   
Sbjct: 35  KFKTPSGVFSFGQ-----IDKASKLLIEHAIIGETDRLLDLGCGYGVIGITLKKENPDIS 89

Query: 124 GVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               D++ +ALE AK NA  N +    R   L   W   +   FD IV NPP        
Sbjct: 90  LCMSDVNERALEFAKINAKNNNIVADIRLGNLYEPWKDEI---FDNIVCNPPIAA----- 141

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFE 240
                               G   +  I      HL+  G   +   +N+    + +I +
Sbjct: 142 --------------------GKKVWEKIIVEAPDHLSAKGKLQLVAYHNKGGERLKKIMK 181

Query: 241 S 241
           S
Sbjct: 182 S 182


>gi|295694828|ref|YP_003588066.1| methyltransferase small [Bacillus tusciae DSM 2912]
 gi|295410430|gb|ADG04922.1| methyltransferase small [Bacillus tusciae DSM 2912]
          Length = 210

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 27/167 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      +  ++     R+LDLG G G + +A     P  +    DI+ +A+E+AK NA
Sbjct: 42  VDYGTRLLIESMDVPKRGRVLDLGCGYGPIGIAAALLEPGVQVTMADINERAVELAKENA 101

Query: 142 VTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
               +  R +   SD F+ + +  FD +  NPP                           
Sbjct: 102 RRLRLQ-RVEVYVSDGFAGLGDRRFDRVYCNPPIRAGKE--------------------- 139

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
                YR +    + HL   G   V +   Q  D ++   +R    V
Sbjct: 140 ---QVYR-LLSEAAGHLADKGQVWVVVQKKQGADSLKRELARHFREV 182


>gi|289679660|ref|ZP_06500550.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae FF5]
          Length = 91

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + +A  +  P  +    D+S  ALE+A  N   +G+ +R  T+Q D F  + G  FD+IV
Sbjct: 1   IGIACAEVFPDAEVALADLSYDALEVANQNIERHGMDDRVYTVQGDGFDGLPGQRFDLIV 60

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           SNPPY+++     +  E    +P ++L  G
Sbjct: 61  SNPPYVDAEDFADMPDEY-QHEPELALACG 89


>gi|253731146|ref|ZP_04865311.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725111|gb|EES93840.1| 16S rRNA methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 202

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 82/246 (33%), Gaps = 59/246 (23%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKAHPPGPSKRIADVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   N + +     +SD  S+VE   FD I++NPP                        
Sbjct: 102 KNKKLNDI-DNVIVKESDALSAVEDKSFDFILTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLF 245
               G      I +     L+ +G   V I   Q        +  +F       + +  +
Sbjct: 140 ----GKETVHRIFEQALHRLDSNGELFVVIQKKQGMPSAKKRMNELFGNVEVVNKDKGYY 195

Query: 246 LVNAFK 251
           ++ + K
Sbjct: 196 ILRSIK 201


>gi|145295822|ref|YP_001138643.1| hypothetical protein cgR_1747 [Corynebacterium glutamicum R]
 gi|140845742|dbj|BAF54741.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 525

 Score = 92.1 bits (228), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 36/260 (13%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD---------- 59
               V      QV V+  + L       L +A +  +  E    ++  R           
Sbjct: 79  LRAFVL---RDQVRVEKLAALLGEALKTLVDAALVEISGEYAQFLIDIRPHLIAGRQQWV 135

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +   +++     P P+  L V +A    L          +LDLGTG+G   L     +
Sbjct: 136 FSDADASMTQHV--PGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLGQAGAA 193

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              + +  D+  +AL+ A++  V +G+  +   ++  WF  V G  FD I++NPP++   
Sbjct: 194 Q--EIIATDVHPRALDFAEATLVDSGIPTQ--LVEGSWFEPVRGRTFDRIIANPPFVVG- 248

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQ--K 232
                  E+      +  D G+D       +      HLN  G   +        +Q  +
Sbjct: 249 -----PPEIG----HVYRDSGMDLDGATALVVKEACAHLNPGGTAHLLGAWVHSADQSWQ 299

Query: 233 VDVVRIFESRKLFLVNAFKD 252
             V               +D
Sbjct: 300 QRVAEWLPDNGYVAWVIERD 319


>gi|331701736|ref|YP_004398695.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
 gi|329129079|gb|AEB73632.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
          Length = 203

 Score = 91.7 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 37/194 (19%)

Query: 62  NVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+  T  +  F        + +LV+      +P        ++LD+GTG G + +++ K 
Sbjct: 29  NLVFTSDNGVFSKHTVDYGSRVLVNHINYDLIPD------GKLLDMGTGYGPIGISIAKA 82

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   +D++  AL +AK NA  N V +     +S+ + ++   +  IV+NPP     
Sbjct: 83  FPDRQIDMIDVNEVALALAKKNADANRV-DNVHIFESNIYEAITDQYAAIVTNPP----- 136

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                   VR             G      +  G   HL   G  +V +   Q      +
Sbjct: 137 --------VRA------------GKKVVDAMISGAVDHLVDGGTLTVVLQKKQGAPSAKK 176

Query: 238 IFESRKLFLVNAFK 251
           +            K
Sbjct: 177 LMTEL-FGDCQILK 189


>gi|262401640|ref|ZP_06078206.1| predicted O-methyltransferase [Vibrio sp. RC586]
 gi|262352057|gb|EEZ01187.1| predicted O-methyltransferase [Vibrio sp. RC586]
          Length = 239

 Score = 91.7 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 10/151 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + ILD+G GTG +     +  P      +DI   A +  + N   +  ++R      D
Sbjct: 42  PPLSILDIGCGTGLLSFMCAQRFPEADITALDIELSAFQATEHNRKNSPWADRITCHHHD 101

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 +  F  I+ NPPY  S        +VR      +       L H + + + + +
Sbjct: 102 ILHWQPDRRFAAIICNPPYFNSGETA--QQQVR------ATARHTISLQH-QALIERLPK 152

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L  DG+ S  +   +  D + + +   L L
Sbjct: 153 LLKSDGVASFILPKTEGEDFIVLAKQAGLHL 183


>gi|237736938|ref|ZP_04567419.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420800|gb|EEO35847.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 226

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +             ++LD+GTG G + + L  ++     VG+DI  +   +A  N 
Sbjct: 28  VDAVILSDF--FNPHKDGKVLDIGTGNGIIPILLYAKNKSRDIVGIDIQEENSSLAIRNI 85

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV---DCLGLEVRDFDPRISLD 197
             N + E  + +  D         FD IVSNPPY++       D     +   + +    
Sbjct: 86  ELNKLEEYIEIVNYDVKEYPFGNSFDYIVSNPPYMKVDGKKQNDLSSKAIARHEIK---- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
                L  Y  +     R L   G  ++     + + + R+ E     +      Y   D
Sbjct: 142 -----LDLYD-LVKNAKRLLKPMGSFTLVHRSYRFIKISRVLEESGFSIKRVRFVYFSKD 195


>gi|313204259|ref|YP_004042916.1| methyltransferase type 11 [Paludibacter propionicigenes WB4]
 gi|312443575|gb|ADQ79931.1| Methyltransferase type 11 [Paludibacter propionicigenes WB4]
          Length = 237

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 13/163 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+GTGTG + L L + S       +DI   A+  A+ N + +   +R  
Sbjct: 32  WAPIGEAKNILDVGTGTGLIALMLAQRS-SAMITAIDIDQDAVFQARENTLNSPWKDRVA 90

Query: 152 TLQSDW--FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              S    F++ E   FD+IVSNPPY  +         +++ D   +     D L+H   
Sbjct: 91  VQSSSLQEFTANESATFDLIVSNPPYFVNS--------LKNPDKNRATARHTDSLTH-EE 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           + +G  + L+  G   + +  N+ +  V   +S+ LF     K
Sbjct: 142 LINGSLKLLSAGGRLCIILPVNEGMQCVDFAQSKGLFCSKLVK 184


>gi|168026308|ref|XP_001765674.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683100|gb|EDQ69513.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 284

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 25/218 (11%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
            QR     +  R        R++G             D +EP  ++  LVD+ LA     
Sbjct: 29  EQRKSFGASPRRRSASI---RLVGR----------HPDVYEPCDDSFALVDALLADKANL 75

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS-- 147
           +E+R  +  L++G G+G V  +L          +    DIS  A ++ +     +G+   
Sbjct: 76  VERRPKL-CLEVGCGSGYVITSLALILADECHAQFFATDISQTAAQVTRETLSAHGLQAD 134

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                L       + G  DV++ NPPY+ +        EV       +  GG  G     
Sbjct: 135 VVVTDLVHGLEKRLAGSVDVLLFNPPYVPTPE-----HEVGAAGITATWAGGDRGRVVID 189

Query: 208 TIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
            +   V   L+  G   +  +  N   ++ +I + +  
Sbjct: 190 RMLTMVDSLLSSKGWFYMVTLTANNPSEICQIMKKKGF 227


>gi|71906159|ref|YP_283746.1| methyltransferase small [Dechloromonas aromatica RCB]
 gi|71845780|gb|AAZ45276.1| Methyltransferase small [Dechloromonas aromatica RCB]
          Length = 384

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 36/232 (15%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLV 82
            D DS++  R+   + +A     K   +  + G       R+      F P R E   L+
Sbjct: 145 TDEDSLVALRELLAVISAHEWRKKGVPVPAVQG-------RIYPHYGVFSPVRGEYVDLI 197

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            SA   +   +         D+GTG+G +  A+L      + V  D   +AL  A  N  
Sbjct: 198 ASAPIPAGCDLA-------FDIGTGSGIIA-AVLARRGVAQIVATDQDARALACAGENIE 249

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G++     +++D F   EG   ++V NPP++ +     +   V D D R+        
Sbjct: 250 QLGLAAAVRIVKADLFP--EGKAPLVVCNPPWLPAQPTSPVEYAVYDPDSRM-------- 299

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI-------GYNQKVDVVRIFESRKLFLV 247
               R    G++ HL   G   + I       G   +  ++       L ++
Sbjct: 300 ---LRGFLAGLAAHLADGGEGWLIISDIAELLGLRSREKLLAWIAEAGLKVI 348


>gi|325134521|gb|EGC57166.1| methyltransferase domain protein [Neisseria meningitidis M13399]
          Length = 331

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 268


>gi|150024451|ref|YP_001295277.1| hypothetical protein FP0346 [Flavobacterium psychrophilum JIP02/86]
 gi|262828321|sp|A6GWI6|TRMN6_FLAPJ RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|149770992|emb|CAL42459.1| Protein of unknown function YfiC [Flavobacterium psychrophilum
           JIP02/86]
          Length = 234

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 12/158 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             + + ILD+G GTG + L L + +   +   ++I  +A E A  N   +  S+R     
Sbjct: 32  NHNPISILDIGAGTGLIALMLAQRTSAVQIDALEIDEEAYEQATDNFENSPWSDRLFCYH 91

Query: 155 SDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +     VE     +D+IV NPP+           E RD      L    D +     + +
Sbjct: 92  AGLDEFVEEPEDEYDLIVCNPPFYAENYKTN--SEQRD------LARFSDAMPF-EELIE 142

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                L+++G+ SV I Y ++   V +    +L+ +  
Sbjct: 143 AADLLLSENGILSVIIPYKEEEKFVTLANEFELYPIKI 180


>gi|24379557|ref|NP_721512.1| hypothetical protein SMU.1125c [Streptococcus mutans UA159]
 gi|24377502|gb|AAN58818.1|AE014950_1 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 198

 Score = 91.7 bits (227), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG + F+       S  F     ++ ++D      L  ++  +   +LDLG G G + +
Sbjct: 23  LLG-QSFH---FLTDSGVF-----SKNMIDYGSQTLLNSLDFAEEKTLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL K         VDI+ +AL++ + NA  N VS      QSD + +V   FD I+SNPP
Sbjct: 74  ALAK-VQKLDVTMVDINNRALDLTRQNAENNEVSANI--FQSDIYENVFDSFDYIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G     TI +G   HL ++G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHTIIEGSINHLKENGSLTIVIQKKQGA 165


>gi|327396406|dbj|BAK13828.1| ribosomal RNA small subunit methyltransferase C RsmC [Pantoea
           ananatis AJ13355]
          Length = 367

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +      F       L V SAL   L         ++LD+G G G +  +L   SP 
Sbjct: 190 DLTVHTLPGVF---SRDGLDVGSAL--LLSTFTPHTKGKVLDIGCGAGVIAASLPAHSPK 244

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+E +K+    NG+    +   S+ FS V G FD+I+SNPP+       
Sbjct: 245 VRLWLCDVHAAAIEASKATLAANGLEG--EVFASNVFSDVTGRFDMIISNPPF------- 295

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                    +      G    L   +T+  G  +HLN  G  
Sbjct: 296 --------HE------GTQTSLDAAQTLIRGAVKHLNSGGEL 323


>gi|297206074|ref|ZP_06923469.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           JV-V16]
 gi|297149200|gb|EFH29498.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           JV-V16]
          Length = 314

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 39/188 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  AL  S+ +       ++LD+GTG+G + +A   +      +  DIS +A+  A
Sbjct: 162 TTQLVMMALERSMTK-----PAKVLDVGTGSGILAIA-ASKLGAESVLATDISDEAVTAA 215

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   N +      ++++   ++ G FD+I++N                      ++  
Sbjct: 216 NENIALNKL-NNIKVIKANLLKNINGKFDLILAN---------------------ILA-- 251

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                      +   ++ HL  +G      I Y Q   V +        +    +   G 
Sbjct: 252 ------EILFDLIPELNDHLAPNGKIIFSGIDYLQAEKVKQSLAENGFSVKTTMQ--EGR 303

Query: 257 DRVLLFCR 264
              LL  R
Sbjct: 304 WVCLLIER 311


>gi|256851208|ref|ZP_05556597.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           27-2-CHN]
 gi|260660632|ref|ZP_05861547.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           115-3-CHN]
 gi|256616270|gb|EEU21458.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           27-2-CHN]
 gi|260548354|gb|EEX24329.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           115-3-CHN]
          Length = 314

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 39/188 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  AL  S+ +       ++LD+GTG+G + +A   +      +  DIS +A+  A
Sbjct: 162 TTQLVMMALERSMTK-----PAKVLDVGTGSGILAIA-ASKLGAESVLATDISDEAVTAA 215

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   N +      ++++   ++ G FD+I++N                      ++  
Sbjct: 216 NENIALNKL-NNIKVIKANLLKNINGKFDLILAN---------------------ILA-- 251

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                      +   ++ HL  +G      I Y Q   V +        +    +   G 
Sbjct: 252 ------EILFDLIPELNDHLAPNGKIIFSGIDYLQAEKVKQSLAENGFSVKTTMQ--EGR 303

Query: 257 DRVLLFCR 264
              LL  R
Sbjct: 304 WVCLLIER 311


>gi|329116075|ref|ZP_08244792.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
 gi|326906480|gb|EGE53394.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
          Length = 199

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 83/211 (39%), Gaps = 44/211 (20%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D + +R++L   TF    +  +    ++D      L  +      ++LDLG G G + +
Sbjct: 14  HDIHELRVSLLGATFTFLTDAGVFSKKMIDYGSQVLLSTLYFHPGDKVLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         VDI+ +A+++++ NA  NGV+      QS+ + +V+G FD I+SNPP
Sbjct: 74  SLAK-VQKVDATMVDINNRAIDLSQKNAERNGVTATIK--QSNIYGNVQGTFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSINFLNNGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFKD 252
                 +  IF       + +  +++ + KD
Sbjct: 166 PSAKDKMSSIFGNVEIIKKDKGYYILRSIKD 196


>gi|282934675|ref|ZP_06339918.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
 gi|281301250|gb|EFA93551.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
          Length = 315

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 38/188 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  AL  S+ +       ++LD+GTG+G + +A  K          DIS +A+  A
Sbjct: 162 TTQLVMMALERSMTK-----PAKVLDVGTGSGILAIAASKLGAESVLATTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   N +      ++++   ++ G FD+I++N                      ++  
Sbjct: 217 NENIALNKL-NNIKVIKANLLKNINGKFDLILAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                      +   ++ HL  +G      I Y Q   V +        +    +   G 
Sbjct: 253 ------EILFDLIPELNDHLAPNGKIIFSGIDYLQAEKVKQSLAENGFSVKTTMQ--EGR 304

Query: 257 DRVLLFCR 264
              LL  R
Sbjct: 305 WVCLLIER 312


>gi|238854674|ref|ZP_04645004.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           269-3]
 gi|260664383|ref|ZP_05865235.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|282932935|ref|ZP_06338332.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
 gi|238832464|gb|EEQ24771.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           269-3]
 gi|260561448|gb|EEX27420.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           SJ-7A-US]
 gi|281302970|gb|EFA95175.1| ribosomal protein L11 methyltransferase [Lactobacillus jensenii
           208-1]
          Length = 314

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 69/188 (36%), Gaps = 39/188 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  AL  SL +      V++LD+GTG+G + +A   +      +  DIS +A+  A
Sbjct: 162 TTQLVMMALERSLTK-----PVKVLDVGTGSGILAIA-ASKLGAKSVLATDISDEAVTAA 215

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   N +    + ++++    V+G FD+I++N                      ++  
Sbjct: 216 NENIALNKL-NNIEVIKANLLKDVDGKFDLILAN---------------------ILA-- 251

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                      +   + +HL  +G      I Y Q   V +        +    +   G 
Sbjct: 252 ------EILFDLIPDLDKHLAPNGKVIFSGIDYLQAEKVKQRLADNGFSVKTTMQ--EGR 303

Query: 257 DRVLLFCR 264
              LL  R
Sbjct: 304 WVCLLIER 311


>gi|221201707|ref|ZP_03574745.1| putative methyltransferase [Burkholderia multivorans CGD2M]
 gi|221207218|ref|ZP_03580228.1| putative methyltransferase [Burkholderia multivorans CGD2]
 gi|221172806|gb|EEE05243.1| putative methyltransferase [Burkholderia multivorans CGD2]
 gi|221178523|gb|EEE10932.1| putative methyltransferase [Burkholderia multivorans CGD2M]
          Length = 377

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 71/204 (34%), Gaps = 31/204 (15%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVD 83
           D  S++  R+   L  A     K   I  + G        +      F P R E   LV 
Sbjct: 138 DAPSMVSLRELLGLVGAHEWRKKGVPIPALGGAA------IHPHYGVFSPVRGEYVTLV- 190

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                   R          D+GTGTG +   L       + V  D   +AL  A+ N   
Sbjct: 191 -------ARAPLPATSVAFDIGTGTGVLAAVLASRGVE-RVVATDQDPRALACARENLER 242

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G + R D +++D F    G   ++V NPP++ +     +   V D D R+         
Sbjct: 243 LGYAGRVDVVEADLFPP--GRAPLVVCNPPWVPARPSAPIEFAVYDLDSRM--------- 291

Query: 204 SHYRTIADGVSRHLNKD--GLCSV 225
              R    G++ HL     G   +
Sbjct: 292 --LRGFLKGLAAHLEPGGEGWLIL 313


>gi|116629036|ref|YP_814208.1| 16S RNA G1207 methylase RsmC [Lactobacillus gasseri ATCC 33323]
 gi|116094618|gb|ABJ59770.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus gasseri ATCC
           33323]
          Length = 217

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F + R +  + +L+ +    + P         ILD+GTG G + L   K 
Sbjct: 44  DLKFTTDAGVFSKLRIDYGSGVLIKTMKELTFPEAG------ILDVGTGYGPMGLFAAKF 97

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++AK NA  N + +  +  +S+ +  V+  + +I++NPP     
Sbjct: 98  WPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQVDNKYGLIITNPPIRA-- 154

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I      HL ++G+  V I   Q      +
Sbjct: 155 -----------------------GKKVVDQILSEAKEHLVENGILLVVIQKKQGAPSAKK 191

Query: 238 IFES 241
           +   
Sbjct: 192 LMTK 195


>gi|238853614|ref|ZP_04643983.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
 gi|311111169|ref|ZP_07712566.1| 16S RNA methylase [Lactobacillus gasseri MV-22]
 gi|238833758|gb|EEQ26026.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
 gi|311066323|gb|EFQ46663.1| 16S RNA methylase [Lactobacillus gasseri MV-22]
          Length = 203

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 73/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F + R +  + +L+ +    + P         ILD+GTG G + L   K 
Sbjct: 30  DLKFTTDAGVFSKLRIDYGSGVLIKTMKELTFPEAG------ILDVGTGYGPMGLFAAKF 83

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++AK NA  N + +  +  +S+ +  V+  + +I++NPP     
Sbjct: 84  WPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQVDNKYGLIITNPPIRA-- 140

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I      HL ++G+  V I   Q      +
Sbjct: 141 -----------------------GKKVVDQILSEAKEHLVENGILLVVIQKKQGAPSAKK 177

Query: 238 IFES 241
           +   
Sbjct: 178 LMTK 181


>gi|291243854|ref|XP_002741815.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 217

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 12/212 (5%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+ ++        +EP  +T LL+D AL      ++    +  +++G G G V   L   
Sbjct: 6   DYSHITSQDCQLVYEPAEDTFLLLD-ALEKEFETLQNLRPLICVEVGCGAGVVITFLASL 64

Query: 119 SP-FFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI 175
                   G DI+  A ++++  +  NG++       L +     + GL DV++ NPPY+
Sbjct: 65  LKSDTLCFGTDINYNAAQLSQKTSNQNGMTVNTIVSDLVNALQPRLNGLIDVLIFNPPYV 124

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVD 234
            +        EV   D   S  GGIDG      I   +   L+  G+  + I   N++ +
Sbjct: 125 LTP-----SEEVGSRDIVASWAGGIDGRQVIDRILPIIPTVLSPKGVFYLLILKENKQDE 179

Query: 235 VVRIFESRKLFLVNAFKDYGGNDR--VLLFCR 264
           +  I  S    +    +   G +R  VL F R
Sbjct: 180 IEDIMNSHGFEMAVVLQRRTGPERLSVLKFTR 211


>gi|238880758|gb|EEQ44396.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 221

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 15/193 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLALLKE-SPFFKGVG 126
           + +EP  ++ LL+D           K   V  L  ++GTG+G V   + K   P    + 
Sbjct: 14  EVYEPSEDSFLLLDCFEKEKDYLQSKFKTVVPLVTEIGTGSGIVTTFVAKHIVPNGIFLT 73

Query: 127 VDISCKALEIAKSNAVTNGV----SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
            DI+  A E        N      +   D+ Q D  S+++    D+++ NPPY+ S  + 
Sbjct: 74  TDINPHACETVLQTVKHNNDIGSSNCLLDSTQMDLTSAIKEREVDLLIFNPPYVPSSEIP 133

Query: 182 CLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVR 237
            +     + DP    ++L GG DG+     + + ++  L+K G+  +     N+   V  
Sbjct: 134 EIPRT--NNDPVWLDLALVGGEDGMVITWKVLNNLTNVLSKSGVAYILFCARNKPETVTS 191

Query: 238 IFESRKLFLVNAF 250
           I +S+    V   
Sbjct: 192 IMQSKGW-NVEVV 203


>gi|114683755|ref|XP_525443.2| PREDICTED: hemK methyltransferase family member 2 isoform 2 [Pan
           troglodytes]
          Length = 214

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 71/193 (36%), Gaps = 12/193 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELARVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       +    D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTP-----PQ 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 FLVNAFKDYGGND 257
               A     G +
Sbjct: 192 QGTTALSRQAGRE 204


>gi|68471703|ref|XP_720158.1| hypothetical protein CaO19.7963 [Candida albicans SC5314]
 gi|68471966|ref|XP_720026.1| hypothetical protein CaO19.331 [Candida albicans SC5314]
 gi|46441876|gb|EAL01170.1| hypothetical protein CaO19.331 [Candida albicans SC5314]
 gi|46442013|gb|EAL01306.1| hypothetical protein CaO19.7963 [Candida albicans SC5314]
          Length = 224

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 15/193 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLALLKE-SPFFKGVG 126
           + +EP  ++ LL+D           K   V  L  ++GTG+G V   + K   P    + 
Sbjct: 17  EVYEPSEDSFLLLDCFEKEKDYLQSKFKTVVPLVTEIGTGSGIVTTFVAKHIVPNGIFLT 76

Query: 127 VDISCKALEIAKSNAVTNGV----SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
            DI+  A E        N      +   D+ Q D  S+++    D+++ NPPY+ S  + 
Sbjct: 77  TDINPHACETVLQTVKHNNDIGSSNCLLDSTQMDLTSAIKEREVDLLIFNPPYVPSSEIP 136

Query: 182 CLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVR 237
            +     + DP    ++L GG DG+     + + ++  L+K G+  +     N+   V  
Sbjct: 137 EIPRT--NNDPVWLDLALVGGEDGMVITWKVLNNLTNVLSKSGVAYILFCARNKPETVTS 194

Query: 238 IFESRKLFLVNAF 250
           I +S+    V   
Sbjct: 195 IMQSKGW-NVEVV 206


>gi|195342065|ref|XP_002037622.1| GM18204 [Drosophila sechellia]
 gi|194132472|gb|EDW54040.1| GM18204 [Drosophila sechellia]
          Length = 224

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++        +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+   
Sbjct: 8   HLSPEDFEHVYEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAG 66

Query: 122 FKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           F   +  DI+ KA    +  A  NG   R D+++     ++     DV++ NPPY+ +  
Sbjct: 67  FSMCLATDINPKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYVVTSD 124

Query: 180 VDCLGLEVRDF-DPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQ 231
            +    +     +         S  GG DG      +   +   L+  G+   + +  N+
Sbjct: 125 EELQTHQFDSHSESSTDRNLVFSWAGGQDGRRVTDILLKQLDDILSPRGVLYLLLLRENK 184

Query: 232 KVDVVRIFESRKLFLVNA 249
             ++++  E  +   V  
Sbjct: 185 PEEIIKYLEGLQFRAVKF 202


>gi|251809958|ref|ZP_04824431.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875008|ref|ZP_06283883.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
 gi|251806501|gb|EES59158.1| 16S rRNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296336|gb|EFA88855.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
 gi|329734650|gb|EGG70957.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU028]
          Length = 244

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 40/202 (19%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT  +  F  +   +   D  +   L          I D+G G G + LA+ K SP  
Sbjct: 69  LELTTDAGVFS-KDNVDFGSDLLIKTFLKEHPPGPSKTIADVGCGYGPIGLAIGKASPHH 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +DI+ +AL +A+ N   N V +    ++SD  S+V    FD I++NPP        
Sbjct: 128 QITMLDINNRALALAEMNKTKNQV-DNVTIMESDCLSAVNHQCFDYILTNPPIRA----- 181

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      I +     L   G   V I   Q        + 
Sbjct: 182 --------------------GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 221

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       +S+  +++ + K
Sbjct: 222 ELFGNVEIIAKSKGYYILKSIK 243


>gi|325578684|ref|ZP_08148760.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159723|gb|EGC71854.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 330

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F        L DS  +  L  +      ++LD+G G G +   + K  P 
Sbjct: 160 DLRIYSLPGVFS----ANEL-DSGTSLLLSTLTSPIQGKVLDVGCGAGVIGSMIKKYHPK 214

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    DI   A++ A+     N +      + SD FS +EG FD+I+SNPP+ + +   
Sbjct: 215 TEVTMTDIHAMAIQSARQTLAENQLEGNV--IASDVFSHIEGKFDLIISNPPFHDGIDTA 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                    + +      HL   G  
Sbjct: 273 ---------------------YRAVKELIQQAKWHLTAGGEL 293


>gi|221213346|ref|ZP_03586321.1| putative methyltransferase [Burkholderia multivorans CGD1]
 gi|221166798|gb|EED99269.1| putative methyltransferase [Burkholderia multivorans CGD1]
          Length = 377

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           S++  R+   L  A     K   I  + G        +      F P R E   LV    
Sbjct: 141 SMVSLRELLGLVGAHEWRKKGVPIPALGGAA------IHPHYGVFSPVRGEYVTLV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSVAFDIGTGTGVLAAVLASRGVE-RVVATDQDPRALACARENLERLGY 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + R D +++D F    G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 AGRVDVVEADLFPP--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLAAHLEPGGEGWLIL 313


>gi|239636940|ref|ZP_04677938.1| methyltransferase small domain protein [Staphylococcus warneri
           L37603]
 gi|239597488|gb|EEQ79987.1| methyltransferase small domain protein [Staphylococcus warneri
           L37603]
          Length = 202

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 49/234 (20%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    +PD   D++                    I      +++ L   +  F  R + 
Sbjct: 2   SHYYDENPDVKSDEK-------------------HITYECYQHSINLITDNGVFS-RDKV 41

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +   D  +   L          I D+G G G + L + K SP  +   +D++ +ALE+AK
Sbjct: 42  DFGSDLLIQSFLKANPPGPSKTIADVGCGYGPIGLMIAKVSPHHQITMLDVNRRALELAK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   N + E  D  +SD  + V+   FD +++NPP                        
Sbjct: 102 KNKKKNHI-ENADIFESDGMTQVDDNQFDFVLTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAF 250
               G +    I +   + L  +G   V I   Q      +  +      V   
Sbjct: 140 ----GKAVVHRIFEEAYQKLKSNGELYVVIQKKQGMPSAKKKMDEL-FNNVEVV 188


>gi|120406733|ref|YP_956562.1| putative methylase [Mycobacterium vanbaalenii PYR-1]
 gi|119959551|gb|ABM16556.1| putative methylase [Mycobacterium vanbaalenii PYR-1]
          Length = 235

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++ + + P+ +++LLV++A A  +         R+ DL TG+G V L     S   +   
Sbjct: 19  VAVEVYPPQEDSQLLVEAATAAGV-----LPGARVADLCTGSGVVALG-AAASGAAEVTA 72

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD--CL 183
            DI  KA++  + +AV  G     D  +  W  +VE G +DV+++NPPY+     D   +
Sbjct: 73  FDICPKAVQRTRQDAVAAGAD--VDVHRGSWARAVEFGPYDVVLANPPYVPVPDADGETI 130

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   P  + D G DG      +       L++ G   V
Sbjct: 131 PAAAG---PSRAWDAGPDGRLVLDPMCAAAPLLLDEGGTMLV 169


>gi|291007719|ref|ZP_06565692.1| methylase of polypeptide chain release factors [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 371

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 26/200 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD     +LP           D+GTGTG +  A+L      + V
Sbjct: 165 RIHPHYGVFAPVRGEYVDLVATAALPT-----GGVAFDIGTGTGVLA-AVLAHRGVARIV 218

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G ++R     +D F +  G   ++V NPP+I +     +  
Sbjct: 219 ATDQDPRALACARENIARLGFADRVSVEAADLFPA--GRAALVVCNPPWIPAQPTTPIEN 276

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V  +DP         G    R    G++ HL     G   +    E  G   +  +   
Sbjct: 277 AV--YDP---------GSRMLRGFLAGLADHLEPGGEGWLVLSDLAEHLGLRSRARLSEW 325

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                L +         + R
Sbjct: 326 IRESGLEVAGRLDVPARHPR 345


>gi|226506076|ref|NP_001150241.1| LOC100283871 [Zea mays]
 gi|195637752|gb|ACG38344.1| hemK methyltransferase family member 2 [Zea mays]
          Length = 278

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 28/207 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             D +EP  ++  LVD+ L+     +  +  +  +++G+G+G    ++ + L +     +
Sbjct: 47  HPDVYEPCDDSFALVDALLSDKAQLLTLQPRL-CMEVGSGSGYVITSLAIMLRQLGSGAQ 105

Query: 124 GVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A E  ++    +GV        + S     + G+ DV V NPPY+ + +  
Sbjct: 106 YLATDINQHAAETTQATLEAHGVHADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV-- 163

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------------- 225
               EV       S  GG++G      I   V   L++ G   +                
Sbjct: 164 ---EEVGCRGIASSWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDICHLMS 220

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           E+GY  +V + R  E   L+++  ++D
Sbjct: 221 EMGYASRVILKRCTEEESLYVLKFWRD 247


>gi|226530570|ref|NP_001141264.1| hypothetical protein LOC100273353 [Zea mays]
 gi|194703640|gb|ACF85904.1| unknown [Zea mays]
          Length = 278

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 28/207 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             D +EP  ++  LVD+ L+     +  +  +  +++G+G+G    ++ + L +     +
Sbjct: 47  HPDVYEPCDDSFALVDALLSDKAQLLTLQPRL-CMEVGSGSGYVITSLAIMLRQLGSGAQ 105

Query: 124 GVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A E  ++    +GV        + S     + G+ DV V NPPY+ + +  
Sbjct: 106 YLATDINQHAAETTQATLEAHGVHADVIVTDIMSGLDKRLAGMVDVAVVNPPYVPTPV-- 163

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------------- 225
               EV       S  GG++G      I   V   L++ G   +                
Sbjct: 164 ---EEVGCRGIASSWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDICHLMS 220

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           E+GY  +V + R  E   L+++  ++D
Sbjct: 221 EMGYASRVILKRCTEEESLYVLKFWRD 247


>gi|222111716|ref|YP_002553980.1| methyltransferase small [Acidovorax ebreus TPSY]
 gi|221731160|gb|ACM33980.1| methyltransferase small [Acidovorax ebreus TPSY]
          Length = 390

 Score = 91.7 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A       +         ++GTGTG +  A+L    
Sbjct: 171 GARIYPHYGVFSPVRGEYVDLVAQA------PLPPGADALAFEIGTGTGVLA-AVLARRG 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
             + V  ++  +AL  A+ N    G+ +R   LQ+D F      G   +IV NPP++ + 
Sbjct: 224 VARVVATELDPRALACARDNLTRLGLEDRVQLLQTDLFPPATTFGRAPLIVCNPPWLPAK 283

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
               +   V D D R+            R    G+  HL     G   +
Sbjct: 284 ASAPIERAVYDEDSRM-----------LRGFLTGLPAHLAPHGEGWLIL 321


>gi|87159829|ref|NP_037372.2| hemK methyltransferase family member 2 isoform 1 [Homo sapiens]
 gi|313104228|sp|Q9Y5N5|HEMK2_HUMAN RecName: Full=HemK methyltransferase family member 2; AltName:
           Full=M.HsaHemK2P; AltName: Full=N(6)-adenine-specific
           DNA methyltransferase 1
          Length = 214

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLNALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       +    D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTP-----PQ 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPKGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 F 245
            
Sbjct: 192 Q 192


>gi|7717305|emb|CAB90428.1| PRED28 [Homo sapiens]
          Length = 214

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       +    D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTP-----PQ 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPKGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 F 245
            
Sbjct: 192 Q 192


>gi|186477486|ref|YP_001858956.1| methyltransferase small [Burkholderia phymatum STM815]
 gi|184193945|gb|ACC71910.1| methyltransferase small [Burkholderia phymatum STM815]
          Length = 389

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 81/238 (34%), Gaps = 38/238 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV+  R+   L  A     K   I   LG R        +        P     VD    
Sbjct: 155 SVVSLRELLGLIGAHEWRKKGVEIPA-LGER--------IHPHYGVFSPVRGEYVDLVAR 205

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             LP  +        D+G GTG +   L K     + V  D   +AL  A+ N    G  
Sbjct: 206 APLPSQKCA-----FDIGVGTGVLSAVLAKRG-VARIVATDQDPRALACARENLTRLGYD 259

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ++ + + +D F   EG   +IV NPP++ +     +   V D++ R+ L           
Sbjct: 260 KQVELIAADLFP--EGRAPLIVCNPPWLPARPASPIENAVYDYESRMLLG---------- 307

Query: 208 TIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
               G++ HL     G   +    E  G      ++    S  L  V   +D     R
Sbjct: 308 -FLSGLADHLEPGGEGWLILSDFAEHLGMRTHDWLLAAIASAGLT-VAGREDI--KPR 361


>gi|315653117|ref|ZP_07906042.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
 gi|315489482|gb|EFU79119.1| methyltransferase domain protein [Lactobacillus iners ATCC 55195]
          Length = 204

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      +  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLIKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +DI+ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDINERALALAKRNAQLNEI-DNVNIFSSDCYRNLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|307200046|gb|EFN80392.1| N(6)-adenine-specific DNA methyltransferase 1 [Harpegnathos
           saltator]
          Length = 217

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 12/160 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL---KESPFFKGVGV 127
            +EP  ++ LL+D AL   L  +E    V  L++G+G+G V  AL    K     + + V
Sbjct: 16  VYEPSEDSYLLID-ALEADLKVLEAMKPVICLEIGSGSGVVITALAMALKRHHSAQFIAV 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A    +  ++ N V      LQ +      + G  DVI+ NPPY+ +   + L  
Sbjct: 75  DINPDACRATRRTSLDNSVIVNV--LQMNLLDCIQIRGQVDVILFNPPYVATEYEEVLDD 132

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +       +  GG  G      +   +   L+  GL  +
Sbjct: 133 RLV----FKTWAGGKHGRQVMEQVFSTIPEILSDSGLFYL 168


>gi|150401069|ref|YP_001324835.1| methyltransferase small [Methanococcus aeolicus Nankai-3]
 gi|150013772|gb|ABR56223.1| methyltransferase small [Methanococcus aeolicus Nankai-3]
          Length = 201

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 75/218 (34%), Gaps = 46/218 (21%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  I+  + F        S  F P+      +D      +  ++      ILD+G G G 
Sbjct: 17  IEGIIRNKKF---TFKTDSGIFSPKK-----IDKGTKILVEALQLGKNYDILDIGCGYGV 68

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-----ERFDTLQSDWFSSVE-GL 164
           V +++  E         DI+ +A+ +AK N   N +      ++   +Q + + +V+   
Sbjct: 69  VGISIANEVN--SITMTDINNRAVNLAKKNLKLNNIDKYLEEDKITIVQGNLYQNVKNKK 126

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D+I+SNPP                            G    + I       L ++G   
Sbjct: 127 YDLIISNPPI-------------------------KAGKDIIQQIIKDGKEILKQNGSIW 161

Query: 225 VEIGYNQKV-DVVRIFES-RKLFLVNAFKDYGGNDRVL 260
           + I        + +  E       +   K  GG  RVL
Sbjct: 162 LVIQTKHGAKSITKYMEEIYGNVEIITIK--GGF-RVL 196


>gi|282852742|ref|ZP_06262084.1| methyltransferase small domain protein [Lactobacillus gasseri
           224-1]
 gi|282556484|gb|EFB62104.1| methyltransferase small domain protein [Lactobacillus gasseri
           224-1]
          Length = 171

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 35/179 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F + R +  + +L+ +    + P         ILD+GTG G + L   K 
Sbjct: 24  DLKFTTDAGVFSKLRIDYGSGVLIKTMKELTFPEAG------ILDVGTGYGPMGLFAAKF 77

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++AK NA  N + +  +  +S+ +  V+  + +I++NPP     
Sbjct: 78  WPDQEVDMVDVNERAIDLAKRNAQFNHI-DNVNIYESNIYEQVDNKYGLIITNPPIRA-- 134

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                  G      I      HL ++G+  V I  N+   V R
Sbjct: 135 -----------------------GKKVVDQILSEAKEHLVENGILLVVIQKNKGPQVQR 170


>gi|255536286|ref|YP_003096657.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10]
 gi|262828309|sp|C6X2D2|TRMN6_FLAB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|255342482|gb|ACU08595.1| Methyltransferase [Flavobacteriaceae bacterium 3519-10]
          Length = 231

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 23/201 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + F   + T+       R  T    D  L  +L  +   D   IL++GTGTG V L   +
Sbjct: 2   KPFRFKKFTVQQHKEVFRVGT----DGVLLGALADVS--DAKNILEVGTGTGLVALMTAQ 55

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176
            +P      +D++  A E+A  N + +    R   +  D+ +   +  FD+I+SNPPY E
Sbjct: 56  RNPTSNITAIDVNPVAAELAAKNFLESHFGHRMRAMHCDYKTFGTQKKFDLIISNPPYFE 115

Query: 177 S--VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +     D    + R+             LS  +T+    +  L  +G   V I +     
Sbjct: 116 TNPSEKDATARQQRE-------------LSF-KTLISKTAEILATEGRFCVIIPFPAGPT 161

Query: 235 VVRIFESRKLFLVNAFKDYGG 255
             +  E  KLFL+     YG 
Sbjct: 162 FEKTCEENKLFLLRRITVYGN 182


>gi|255280358|ref|ZP_05344913.1| putative N-6 adenine-specific DNA methylase [Bryantella
           formatexigens DSM 14469]
 gi|255268823|gb|EET62028.1| putative N-6 adenine-specific DNA methylase [Bryantella
           formatexigens DSM 14469]
          Length = 245

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+  S D F    +  LL           +  R+  R+LDLGTGTG + + L  ++P 
Sbjct: 18  GYRIIQSRDGFCFGMDAVLL--------SGFVRVRERERVLDLGTGTGIIPILLEAKTPG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I  ++ ++A+ +   NG+S+R   ++ D   +V       FDV+ SNPPY+  
Sbjct: 70  EHFTGLEIQKRSADMARRSVELNGLSDRISIVEGDIKEAVSIFGRASFDVVTSNPPYMTG 129

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               +   L   +   +   +L            +    +  L ++G   +  
Sbjct: 130 NHGLVNPELPKAIARHEILCTL----------EDVVSQAAHLLRENGRFYMVH 172


>gi|121634925|ref|YP_975170.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18]
 gi|120866631|emb|CAM10382.1| hypothetical protein NMC1132 [Neisseria meningitidis FAM18]
          Length = 331

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 268


>gi|121595496|ref|YP_987392.1| methyltransferase small [Acidovorax sp. JS42]
 gi|120607576|gb|ABM43316.1| methyltransferase small [Acidovorax sp. JS42]
          Length = 390

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A       +         ++GTGTG +  A+L    
Sbjct: 171 GARIYPHYGVFSPVRGEYVDLVAQA------PLPPGADALAFEIGTGTGVLA-AVLARRG 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
             + V  ++  +AL  A+ N    G+ +R   LQ+D F      G   +IV NPP++ + 
Sbjct: 224 VARVVATELDPRALACARDNLTRLGLEDRVQLLQTDLFPPATTFGRAPLIVCNPPWLPAK 283

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
               +   V D D R+            R    G+  HL     G   +
Sbjct: 284 ASAPIERAVYDEDSRM-----------LRGFLTGLPAHLAPHGEGWLIL 321


>gi|325140538|gb|EGC63059.1| methyltransferase domain protein [Neisseria meningitidis CU385]
 gi|325200137|gb|ADY95592.1| Methyltransferase small domain protein [Neisseria meningitidis
           H44/76]
          Length = 310

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 103 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 154

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 155 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 212

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 213 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 247


>gi|297160364|gb|ADI10076.1| methyltransferase small [Streptomyces bingchenggensis BCW-1]
          Length = 350

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 25/189 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP     D     D+GTGTG +  A+L      + V
Sbjct: 144 RIHPHYGVFSPVRGEYVDLVAEAPLP----GDSSLAYDIGTGTGVLA-AVLARRGVGRVV 198

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G++ R D ++ D F    G   ++V NPP++ +       +
Sbjct: 199 ATDQDPRALACARENIARLGLAGRVDVVREDLFPG--GRAPLVVCNPPWVPAR--PTSPV 254

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
           E   +DP         G        D ++ HL     G   +    E  G   + ++   
Sbjct: 255 EYAVYDP---------GGRMLHGFLDSLAGHLAPGGEGWLILSDLAEHLGLRPRDELQAA 305

Query: 239 FESRKLFLV 247
           F++  L +V
Sbjct: 306 FDAAGLKVV 314


>gi|150402509|ref|YP_001329803.1| hypothetical protein MmarC7_0584 [Methanococcus maripaludis C7]
 gi|150033539|gb|ABR65652.1| protein of unknown function DUF890 [Methanococcus maripaludis C7]
          Length = 269

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R  + + +    D   P P     ++  L       EK D+  +L++GTG+G + + + K
Sbjct: 56  RHIFGLDMDFHEDALIPTP-----INRYLFIKNIFDEKDDIKEVLEIGTGSGIISILIAK 110

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSN 171
                     D     L+IA+ N   N +  +   + S      D        FD+I+S 
Sbjct: 111 YF-ECNVTATDTVFDYLKIAEENISKNNLDSKIILVDSKGKIIFDIPELKNKKFDLIISY 169

Query: 172 PPYIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PPY     V       R F    +     + GG  G    + I +    +LN+ G+ ++
Sbjct: 170 PPYYADNSVASK----RSFGGAFASEVELIGGGKYGEVFSQKIIEEGMDYLNEGGIIAI 224


>gi|15231240|ref|NP_187952.1| methyltransferase/ nucleic acid binding [Arabidopsis thaliana]
 gi|18377858|gb|AAL67115.1| AT3g13440/MRP15_7 [Arabidopsis thaliana]
 gi|20453313|gb|AAM19895.1| AT3g13440/MRP15_7 [Arabidopsis thaliana]
 gi|332641833|gb|AEE75354.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
           [Arabidopsis thaliana]
          Length = 278

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 32/209 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA     IE    +  +++G G+G    ++ L L  E P   
Sbjct: 46  HREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQNEVPGVH 104

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            + +D +  A  + K     +GV    D + +D  + +E    G  DVIV NPPY+ +  
Sbjct: 105 YLAIDTNPIATRVTKETLEAHGV--NADVICADLATGLEKRLAGSVDVIVVNPPYVPTPE 162

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------EI--- 227
            +     +       +  GG +G +    I   V   L++ G   +         EI   
Sbjct: 163 YEVGMEGI-----ASAWAGGENGRTVIDKILPVVDLLLSEKGWFYLVTLTSNFPAEICLM 217

Query: 228 ----GYNQKVDVVRIFESRKLFLVNAFKD 252
               GY  ++ V R  E   L ++  ++D
Sbjct: 218 MRKKGYASRIVVQRSTEEENLVILKFWRD 246


>gi|45358902|ref|NP_988459.1| SAM-binding motif-containing protein [Methanococcus maripaludis S2]
 gi|45047768|emb|CAF30895.1| SAM (and some other nucleotide) binding motif [Methanococcus
           maripaludis S2]
          Length = 264

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 76/210 (36%), Gaps = 35/210 (16%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ILG    + + +    D   P P     ++  L       EK D+  +L++GTG+G + +
Sbjct: 50  ILGHV--FGLDMDFHEDALIPTP-----INRYLFIKNIFDEKDDIKDVLEIGTGSGIISI 102

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDV 167
            + K          D     L+IAK N   N ++ + + + S      D        FD+
Sbjct: 103 LIAKYF-ECNVTATDTVSDYLKIAKDNISKNNLTSKINLIDSKGKIIFDIPELKNKKFDL 161

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGL 222
           I+S PPY     V       R F    +     + GG  G    + I +    HLN  G+
Sbjct: 162 IISYPPYYADNSVASK----RSFGGAFASEVELIGGGAYGEVFSQKIIEEGMDHLNNGGI 217

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            ++            +F  +        +D
Sbjct: 218 VAI------------MFPEKPFERRKFVED 235


>gi|20094146|ref|NP_613993.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19]
 gi|19887153|gb|AAM01923.1| 16S rRNA G1207 methylase [Methanopyrus kandleri AV19]
          Length = 199

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 68/186 (36%), Gaps = 41/186 (22%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVR 100
           R      I RI G R++   R   +   F  R   P T+LL ++         +   V  
Sbjct: 13  REELGMIIARIRG-REY---RFLTAPGVFSWRRIDPGTQLLAENM--------DLEGVHS 60

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G G + +   KE      V  D++ +A+ +A  N   N V +  +  +   +  
Sbjct: 61  VLDLGCGYGVLGIVAAKELGEGHVVMTDVNRRAIWLANENRRLNDVEDITEVREGSLYDP 120

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           VE   FD IVSNPP                           +GL     I      HL +
Sbjct: 121 VEDEEFDRIVSNPPI-------------------------REGLDLVLRIVREAPNHLTE 155

Query: 220 DGLCSV 225
           DG   +
Sbjct: 156 DGELWL 161


>gi|291616166|ref|YP_003518908.1| RsmC [Pantoea ananatis LMG 20103]
 gi|291151196|gb|ADD75780.1| RsmC [Pantoea ananatis LMG 20103]
          Length = 374

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+  A  L         ++LD+G G G +  +L   SP  +    D+   A+E +K+   
Sbjct: 213 DAGSALLLSTFTPHTKGKVLDIGCGAGVIAASLPAHSPKVRLWLCDVHAAAIEASKATLA 272

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    +   S+ FS V G FD+I+SNPP+                +      G    
Sbjct: 273 ANGLEG--EVFASNVFSDVTGRFDMIISNPPF---------------HE------GTQTS 309

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G  +HLN  G  
Sbjct: 310 LDAAQTLIRGAVKHLNSGGEL 330


>gi|328858365|gb|EGG07478.1| hypothetical protein MELLADRAFT_77592 [Melampsora larici-populina
           98AG31]
          Length = 948

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 57/187 (30%)

Query: 46  LKHESIHRILGWRD--FYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDV- 98
           +  + I  I+   D  F N+++ +      PRPETE     L D    ++ P        
Sbjct: 596 VNKKPIAYIIEECDVPFGNIQIAVQPPILIPRPETEQWTCKLSDMIKTWNDPEKSGTKPQ 655

Query: 99  -----VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------ 147
                +++LD+GTG+G +   L    P    +GVD+  +A+E+AK NA + G++      
Sbjct: 656 FGKHDLKVLDIGTGSGCIPTYLAYNHPNIFVMGVDVDHQAIEVAKRNAFSYGLTFFQRQA 715

Query: 148 ------------ERFDTLQSDWF---------------------------SSVEGLFDVI 168
                        +   +  + F                            + +  FD+I
Sbjct: 716 LQNTRSKVLHYRGQASFMNLNLFSTSFVEDVLNGLRRKSELTNEELSIKDENEDERFDMI 775

Query: 169 VSNPPYI 175
           +SNPPYI
Sbjct: 776 ISNPPYI 782



 Score = 48.9 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 17/80 (21%)

Query: 200 IDGLSHYRTIADGVSR--HLNKD----------GLCSVEIGYNQKVDVVRIFESRK---- 243
            DGL  Y+ I + +     L K                E+G  Q VDV R+   +     
Sbjct: 868 DDGLDFYKEILNRIKNEGILKKRLDRETKQVCLPRVLFEVGNGQAVDVKRLMIDQLKDTE 927

Query: 244 -LFLVNAFKDYGGNDRVLLF 262
            +  V  + D+ G  RV++ 
Sbjct: 928 MVSKVEIWNDFSGVGRVVVG 947


>gi|302526687|ref|ZP_07279029.1| predicted protein [Streptomyces sp. AA4]
 gi|302435582|gb|EFL07398.1| predicted protein [Streptomyces sp. AA4]
          Length = 227

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL     +           +R  DLGTG+G   LA+         V  D
Sbjct: 21  PGVYRPQEDTALL----SSVLAADTRIGCGMRCADLGTGSG--ALAIALARTGATVVAAD 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           IS +AL  A  N V   +      L+     +VE G +DV+V+NPPY+ S         V
Sbjct: 75  ISMRALASAWMNTVLRALP--IGLLRGGLRETVEAGPYDVVVANPPYVPSP-----TPTV 127

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R      + D G DG +    +       L + G   +
Sbjct: 128 RS---TRAWDAGPDGRAMLDPLCAAAPSLLTRTGTLYL 162


>gi|332026824|gb|EGI66933.1| N(6)-adenine-specific DNA methyltransferase 1 [Acromyrmex
           echinatior]
          Length = 215

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 11/159 (6%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVD 128
            +EP  ++ LLVD AL   L  +        L++G+G+G V   LA+  +    + + +D
Sbjct: 16  VYEPSEDSYLLVD-ALEADLEILHAMKPRICLEIGSGSGIVITALAMALKRHNVQFIAID 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLE 186
           I+  A    +  ++ N V    D LQ +    +     FD+I+ NPPY+ +   + +   
Sbjct: 75  INPDACRATRRTSLINSVD--VDILQMNLLDCIRIKYTFDIILFNPPYVVTEYNEVIDDR 132

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +       +  GG +G      +   + + L+  GL  +
Sbjct: 133 LV----FKTWAGGKNGRQVMEQVFTIIPKILSDAGLFYL 167


>gi|220928239|ref|YP_002505148.1| methyltransferase small [Clostridium cellulolyticum H10]
 gi|219998567|gb|ACL75168.1| methyltransferase small [Clostridium cellulolyticum H10]
          Length = 198

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 33/165 (20%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++  T  S  F    +    +D A    +        + +LD+G G GA+ L +    P 
Sbjct: 27  SLTFTSVSGVFSFETK----IDRASENLIKNFTP-SGMSVLDIGCGYGAIGLYIKSIFPQ 81

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
                +D++ +AL+  K NA +N +S   + L S+ F+++EG  FD I+SNPP      +
Sbjct: 82  QNITMIDVNNRALDYTKKNAASNNLS--VEALNSNLFTALEGRTFDDIISNPPIAAGKEL 139

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +                           +      HL+K+G   +
Sbjct: 140 NT-------------------------RLITESYEHLSKNGALWL 159


>gi|15677104|ref|NP_274256.1| hypothetical protein NMB1232 [Neisseria meningitidis MC58]
 gi|7226471|gb|AAF41613.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316985091|gb|EFV64044.1| methyltransferase small domain protein [Neisseria meningitidis
           H44/76]
          Length = 306

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 99  GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 151 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 209 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 243


>gi|296231969|ref|XP_002761379.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1-like
           isoform 1 [Callithrix jacchus]
          Length = 214

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 20/200 (10%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T LL+D          E   V   L++G G+G
Sbjct: 9   PLHGHVGRGTF--------SDVYEPAEDTFLLLDV---LEAAAAELAGVEICLEVGAGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  D++ +A       A  NGV  +     L       ++   D
Sbjct: 58  VVSAFLASMIGPQALYMCTDVNPEAAACTLETARCNGVHIQPVITDLVKGLLPRLKEKVD 117

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV       +  GG  G          VS  L+  GL  + 
Sbjct: 118 LLVFNPPYVVTP-----SEEVGSHGIEAAWAGGRHGREVMDRFFPLVSDLLSPRGLFYLV 172

Query: 227 -IGYNQKVDVVRIFESRKLF 245
            I  N   ++++I +++ L 
Sbjct: 173 TIKQNNPEEILKIMKTKGLQ 192


>gi|325138357|gb|EGC60926.1| methyltransferase domain protein [Neisseria meningitidis ES14902]
 gi|325202074|gb|ADY97528.1| methyltransferase domain protein [Neisseria meningitidis
           M01-240149]
          Length = 331

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 124 GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 175

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 176 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 233

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 234 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 268


>gi|296159505|ref|ZP_06842329.1| methyltransferase small [Burkholderia sp. Ch1-1]
 gi|295890213|gb|EFG70007.1| methyltransferase small [Burkholderia sp. Ch1-1]
          Length = 374

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP + K       D+GTGTG +  ALL +    K +
Sbjct: 169 RIHPHYGVFSPVRGEYVDLVARAPLPSLNKA-----FDIGTGTGVLA-ALLAKRGVKKII 222

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G  ++ + +Q+D F   EG   ++V NPP++ +     +  
Sbjct: 223 ATDQDPRALACARENLTRLGYDQQVEVVQADLFP--EGRAPLVVCNPPWLPARPASPIEY 280

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
            + D + R+ L           +  +G++ HL+    G   +
Sbjct: 281 AIYDPESRMLL-----------SFLNGLADHLSPGGEGWLIM 311


>gi|326332231|ref|ZP_08198511.1| putative methyltransferase small domain protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325949937|gb|EGD41997.1| putative methyltransferase small domain protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 202

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 6/149 (4%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
              RI      +++ L+L S +          +D   A      +  +  RILD+G G G
Sbjct: 17  PFERIPVSATVWDMDLSLVSGSGVFAKGR---LDVGTAVLFRETDPPEGGRILDMGCGYG 73

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + LA    +P  +  GVD++ +A+ +A  NA   G+ +R+              +D I 
Sbjct: 74  IIGLACALAAPSAQVTGVDVNERAVLLANENAAKLGLGDRYRAAVPAEIDP-GTTYDEIW 132

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           SNPP    +    L   +  + PR++ DG
Sbjct: 133 SNPPI--RIGKQALHELLLTWLPRLAPDG 159


>gi|297707707|ref|XP_002830632.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1-like
           isoform 1 [Pongo abelii]
          Length = 214

 Score = 91.3 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T L      A      E   V   L++G+G+G
Sbjct: 9   PLHGHVGRGAF--------SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  DI+ +A       A  N V  +     L       ++   D
Sbjct: 58  VVSAFLASMIGPQALYMCTDINPEAAACTLETARCNKVYIQPVITDLVKGLLPRLKEKVD 117

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV       +  GG +G          V   L+  GL  + 
Sbjct: 118 LLVFNPPYVVTP-----PQEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLV 172

Query: 227 -IGYNQKVDVVRIFESRKLF 245
            I  N   ++++I +++ L 
Sbjct: 173 TIKENNPEEILKIMKTKGLQ 192


>gi|195576127|ref|XP_002077928.1| GD22808 [Drosophila simulans]
 gi|194189937|gb|EDX03513.1| GD22808 [Drosophila simulans]
          Length = 224

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++        +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+   
Sbjct: 8   HLSPEDFEHVYEPAEDSFLLLD-ALEKDLEYLDRLQPRLCVELGSGSGVIITALAKKLAG 66

Query: 122 FKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           F   +  DI+ KA    +  A  NG   R D+++     ++     DV++ NPPY+ +  
Sbjct: 67  FSLCLATDINPKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYVVTSD 124

Query: 180 VDCLGLEVRDF-DPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQ 231
            +    +     +         S  GG DG      +   +   L+  G+   + +  N+
Sbjct: 125 EELQTQQFDSHSESSTDRNLVFSWAGGQDGRRVTDILLKQLDDILSPRGVLYLLLLRENK 184

Query: 232 KVDVVRIFESRKLFLVNA 249
             ++++  E  +   V  
Sbjct: 185 PEEIIKYLEGLQFRAVKF 202


>gi|219683279|ref|YP_002469662.1| 16S RNA G1207 methylase RsmC precursor [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|219620929|gb|ACL29086.1| putative 16S RNA G1207 methylase RsmC precursor [Bifidobacterium
           animalis subsp. lactis AD011]
          Length = 231

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 82  VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L       +    LDLG G GA+ LAL  ESP      VD++ +A+E+A+SN
Sbjct: 71  VDLGTSVLLRHAPMPPLEGTFLDLGCGWGAIALALALESPEATVYAVDVNERAIELARSN 130

Query: 141 AVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A  NG       + +   + V G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 131 AEANGCGN----IHAGTAAVVPGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 184

Query: 199 GIDGLSHYRT-----IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               L   R      +   ++ HL        E+G        +   S+   +++  K
Sbjct: 185 HAY-LVVQRNLGSDSLIPWLAEHLGDG----YEVG--------KYASSKGYRVIDVHK 229


>gi|33600304|ref|NP_887864.1| hypothetical protein BB1318 [Bordetella bronchiseptica RB50]
 gi|33567903|emb|CAE31816.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
          Length = 372

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/223 (22%), Positives = 76/223 (34%), Gaps = 36/223 (16%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           ++  R+   L  A     K   I  +         R+      F P       VD     
Sbjct: 140 LVSLRELLGLIGAAQWQQKGVPIAAL-------GARIHPRYGVFSPV--RGEYVDLVANT 190

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP           D+GTGTG +   L +          D+  +AL  A  N    G+  
Sbjct: 191 PLP-----GGATAFDIGTGTGVLAAVLARR--GLDVTATDLDPRALACAADNLQRLGLGG 243

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           R   LQ+D F    G  D++V NPP++ +     +   + D D R+ L G          
Sbjct: 244 RVRLLQADLFPP--GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTG---------- 290

Query: 209 IADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKL 244
              G++ HLN    G   +    E  G   +  ++   E   L
Sbjct: 291 FLAGLAAHLNPGGEGWLILSDLAEHLGLRSRDWLLAQVEQAGL 333


>gi|297829886|ref|XP_002882825.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328665|gb|EFH59084.1| hypothetical protein ARALYDRAFT_318122 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 278

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 32/209 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA     IE    +  +++G G+G    ++ L L  E P   
Sbjct: 46  HREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLKNEVPGVH 104

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            +  D +  A  + K     +GV    D + +D  S +E    G  DVIV NPPY+ +  
Sbjct: 105 YLATDTNPIATRVTKETLQAHGVDA--DVICADIASVLEKRLSGSVDVIVVNPPYVPTPE 162

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------EI--- 227
                 EV       +  GG +G +    I   V   L++ G   +         EI   
Sbjct: 163 Y-----EVGMEGIASAWAGGENGRTVIDKILPVVDLLLSEKGWFYLVTLTSNFPAEICLM 217

Query: 228 ----GYNQKVDVVRIFESRKLFLVNAFKD 252
               GY  ++ V R  E   L ++  ++D
Sbjct: 218 MRKKGYASRIVVQRSTEEENLVILKFWRD 246


>gi|300070662|gb|ADJ60062.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 227

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 44/202 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R       F     ++  +D      L   +      +LD+G G G + L L K+   
Sbjct: 58  SMRFKTDRGVF-----SKNGIDYGSRVLLENYQPEGAKTLLDVGCGYGTLGLTLAKKF-D 111

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +AL++ + NA+ N VS   +   S+ + +V   +D I+SNPP        
Sbjct: 112 LSVTMVDVNSRALDLCRQNAIDNAVSNT-EIELSNIYEAVSEKYDAIISNPPIRA----- 165

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVV 236
                               G      I  G   +LN  G  ++ I   Q        + 
Sbjct: 166 --------------------GKEVVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKME 205

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F         +  F++ ++K
Sbjct: 206 EVFGNCQLVARDKGYFILRSYK 227


>gi|282934788|ref|ZP_06340026.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
 gi|281301151|gb|EFA93457.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
          Length = 199

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 80/205 (39%), Gaps = 47/205 (22%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++LT  +  F + R +  + +L+ + L       E      ILD+G G G + L   K+
Sbjct: 27  DLKLTTDAGVFSKNRVDYGSGVLIRNMLE------ENPVSGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+ NA  NGV+   +   S  + +V+  + +I++NPP     
Sbjct: 81  WPDRQVDMVDVNERAMDLARKNAEVNGVT-NVNIFASSVYENVDKQYAMILTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G +    I +    HL   G   V I   Q      +
Sbjct: 138 -----------------------GKNIVSEILEKSYEHLLVGGKLLVVIQKKQGAPSAKK 174

Query: 238 IFE-----------SRKLFLVNAFK 251
           + E            +  +++ + K
Sbjct: 175 LMETTFGNCEIVERDKGYYILRSVK 199


>gi|256852103|ref|ZP_05557490.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN]
 gi|260661327|ref|ZP_05862240.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN]
 gi|297205022|ref|ZP_06922418.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16]
 gi|256615515|gb|EEU20705.1| 16S RNA methylase RsmC [Lactobacillus jensenii 27-2-CHN]
 gi|260547782|gb|EEX23759.1| 16S RNA methylase RsmC [Lactobacillus jensenii 115-3-CHN]
 gi|297149600|gb|EFH29897.1| methyltransferase domain protein [Lactobacillus jensenii JV-V16]
          Length = 203

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 80/205 (39%), Gaps = 47/205 (22%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++LT  +  F + R +  + +L+ + L       E      ILD+G G G + L   K+
Sbjct: 31  DLKLTTDAGVFSKNRVDYGSGVLIRNMLE------ENPVSGNILDVGCGYGPIGLFAAKK 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+ NA  NGV+   +   S  + +V+  + +I++NPP     
Sbjct: 85  WPDRQVDMVDVNERAMDLARKNAEVNGVT-NVNIFASSVYENVDKQYAMILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G +    I +    HL   G   V I   Q      +
Sbjct: 142 -----------------------GKNIVSEILEKSYEHLLVGGKLLVVIQKKQGAPSAKK 178

Query: 238 IFE-----------SRKLFLVNAFK 251
           + E            +  +++ + K
Sbjct: 179 LMETTFGNCEIVERDKGYYILRSVK 203


>gi|125623890|ref|YP_001032373.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124492698|emb|CAL97652.1| Ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. cremoris MG1363]
          Length = 198

 Score = 90.9 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 44/202 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R       F     ++  +D      L   +      +LD+G G G + L L K+   
Sbjct: 29  SMRFKTDRGVF-----SKNGIDYGSRVLLENYQPEGAKTLLDVGCGYGTLGLTLAKKF-D 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +AL++ + NA+ N VS   +   S+ + +V   +D I+SNPP        
Sbjct: 83  LSVTMVDVNSRALDLCRQNAIDNAVSNT-EIELSNIYEAVSEKYDAIISNPPIRA----- 136

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVV 236
                               G      I  G   +LN  G  ++ I   Q        + 
Sbjct: 137 --------------------GKEVVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKME 176

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F         +  F++ ++K
Sbjct: 177 EVFGNCQLVARDKGYFILRSYK 198


>gi|296333103|ref|ZP_06875557.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672805|ref|YP_003864476.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149719|gb|EFG90614.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411048|gb|ADM36166.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 201

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 46/205 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           + + T  S  F  +      VD      +   E+ +V   ILD+G G G + L+L  +  
Sbjct: 27  DFKFTSDSGVFSKKE-----VDFGSRLLIDSFEEPEVEGSILDVGCGYGPIGLSLASDFK 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 +D++ +A+E++  NA  NG++      QSD FS+V+    F  I++NPP     
Sbjct: 82  DRTIHMIDVNERAVELSNENAEQNGIT-NVKIYQSDMFSNVDSAQTFASILTNPPIRA-- 138

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----V 233
                                  G      I +  + HL   G   + I   Q       
Sbjct: 139 -----------------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIE 175

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  +F       + +  +++ A K
Sbjct: 176 KLEELFDEVSVVQKKKGYYIIKAKK 200


>gi|171058807|ref|YP_001791156.1| methyltransferase small [Leptothrix cholodnii SP-6]
 gi|170776252|gb|ACB34391.1| methyltransferase small [Leptothrix cholodnii SP-6]
          Length = 392

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/228 (24%), Positives = 81/228 (35%), Gaps = 37/228 (16%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  + G       R+      F P R E   LV  A 
Sbjct: 158 SVVSLRELLGLVGAHEWRKKGVEIAALKG-------RIHPHYGVFSPVRGEYVDLVAQA- 209

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                           D+GTGTG +  ALL        V  D   +AL  A  N    G 
Sbjct: 210 -------PLPSETLAFDIGTGTGVLA-ALLVRRGVEHVVATDTDPRALACAADNLARLGC 261

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + R + L++D F S  G   ++V NPP++       L   + D D R+            
Sbjct: 262 TARVELLKTDLFPS--GRAPLVVCNPPWLPGKPSSALEHAIYDPDSRM-----------L 308

Query: 207 RTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
           R    G++ HL     G   +    E  G   +  +   F++  L ++
Sbjct: 309 RGFLSGLAAHLAPGGEGWLILSDLAEHLGLRTRETLTSWFDAAGLRVI 356


>gi|194017567|ref|ZP_03056178.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC
           7061]
 gi|194010839|gb|EDW20410.1| methyltransferase small domain superfamily [Bacillus pumilus ATCC
           7061]
          Length = 228

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 79/207 (38%), Gaps = 45/207 (21%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE 118
             TL + TF    ++ +     VD      +   E+ DV   ILD+G G G + L+L  E
Sbjct: 47  DFTLRNRTFTFTSDSGVFSKKEVDFGSRLLIEAFEEPDVDGDILDVGCGYGPIGLSLANE 106

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
                   +D++ +A+E++K NA  N V +     QSD FS+V     F  I++NPP   
Sbjct: 107 MTSRTIHMIDVNERAVELSKENAKHNRV-DNVRIYQSDLFSNVHSSAAFASILTNPPIRA 165

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +  + HL  +G   V I   Q     
Sbjct: 166 -------------------------GKKVVHAIFEKSADHLLPEGELWVVIQKKQGGPSA 200

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              + ++F       + +  +++ A K
Sbjct: 201 IEKLEQLFGEVEVVLKKKGYYIIKAKK 227


>gi|134103755|ref|YP_001109416.1| methylase of polypeptide chain release factors [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133916378|emb|CAM06491.1| methylase of polypeptide chain release factors [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 338

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 67/200 (33%), Gaps = 26/200 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD     +LP           D+GTGTG +  A+L      + V
Sbjct: 132 RIHPHYGVFAPVRGEYVDLVATAALPT-----GGVAFDIGTGTGVLA-AVLAHRGVARIV 185

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G ++R     +D F +  G   ++V NPP+I +     +  
Sbjct: 186 ATDQDPRALACARENIARLGFADRVSVEAADLFPA--GRAALVVCNPPWIPAQPTTPIEN 243

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V  +DP         G    R    G++ HL     G   +    E  G   +  +   
Sbjct: 244 AV--YDP---------GSRMLRGFLAGLADHLEPGGEGWLVLSDLAEHLGLRSRARLSEW 292

Query: 239 FESRKLFLVNAFKDYGGNDR 258
                L +         + R
Sbjct: 293 IRESGLEVAGRLDVPARHPR 312


>gi|288960113|ref|YP_003450453.1| methyltransferase [Azospirillum sp. B510]
 gi|288912421|dbj|BAI73909.1| methyltransferase [Azospirillum sp. B510]
          Length = 256

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 15/187 (8%)

Query: 62  NVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +V   L+      +P       +D     ++      +  R+LD+GTGTGA  L L    
Sbjct: 16  SVDFLLNGRVRLMQPEGGYRAAIDPVFLAAITAASAGE--RVLDVGTGTGAAALCLAVRV 73

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
           P    VG++    A   A+ NA   GV+ER   ++ D  +  E    G FD ++ NPPY+
Sbjct: 74  PGVAVVGLEQRADACAFARRNAALTGVAERVTVVEGDLLAPPETVGGGGFDRVMMNPPYL 133

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            +        + +      +   G  GL+ +   AD   R L   G  ++    ++  D+
Sbjct: 134 RAGTASVPPDDWK----AAANVEGKAGLADWVRFAD---RMLKPRGTLTMVHRADRIDDI 186

Query: 236 VRIFESR 242
           +     R
Sbjct: 187 LHALRGR 193


>gi|258569605|ref|XP_002543606.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237903876|gb|EEP78277.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 362

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 74/241 (30%), Gaps = 71/241 (29%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  +            +  +  D        Q+  L + +    + + +           
Sbjct: 32  ARNELRWLREHAQSRDAANIRGD------AWQQRQLRSMVRDRSRGKPLQ---------- 75

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL----ALLKE 118
                  +T      T  L+   L+    R       RILDL TGTG + L     L   
Sbjct: 76  ------PETETYTARTARLI---LSELGARRPSTAPFRILDLCTGTGCIPLLLHSLLAPS 126

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSER--------FDTLQSDWFSSVEGL------ 164
            P    VG+DIS KAL +A+ N   N   E            LQ++     E        
Sbjct: 127 IPNLTIVGIDISPKALNLARRNLDYNISREHLLPRAKQDVHFLQANVLHDEETQRLNGVA 186

Query: 165 --------------------------FDVIVSNPPYIESVIV--DCLGLEVRDFDPRISL 196
                                     +DV++SNPPYI +           VR  +P+++L
Sbjct: 187 TTVPGLPTVLLDFPPAEANSGAKNADWDVLISNPPYISTADFGDGTTKRSVRLHEPKLAL 246

Query: 197 D 197
            
Sbjct: 247 V 247


>gi|21219284|ref|NP_625063.1| methyltransferase [Streptomyces coelicolor A3(2)]
 gi|6468417|emb|CAB61553.2| putative methyltransferase [Streptomyces coelicolor A3(2)]
          Length = 220

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 16/194 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
             +V   +    + P+ +T LL     A +L          +LD+GT  G+  LAL    
Sbjct: 1   MGSVNFMVLPGVYAPQEDTALL-----AGALSDESLPPGAAVLDVGT--GSGALALAAAG 53

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
              +   VD+S +A+  A+ NAV  G+  R      + F+ V G  FD++++NPPY+ + 
Sbjct: 54  RGGRVTAVDVSWRAVCAARLNAVRAGL--RIRVRHGNLFTPVRGESFDLVLANPPYVPAP 111

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVR 237
                           + D G DG      I   V R L   G+  +     +       
Sbjct: 112 ATGRRPRGAAR-----AWDAGHDGRMVLDRICLEVPRLLRPGGVLLLVQSALSDPARTEA 166

Query: 238 IFESRKLFLVNAFK 251
           +     L      +
Sbjct: 167 LLREAGLKAAVTRR 180


>gi|330718919|ref|ZP_08313519.1| 16S RNA G1207 methylase RsmC [Leuconostoc fallax KCTC 3537]
          Length = 206

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 35/206 (16%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKR--DVVRILDLGTGT 108
               ++++    L       + ++ +     +D      L  + K      +ILDLGTG 
Sbjct: 18  TAEHNYHHFDFELLGHQLYFQTDSGVFSKRTIDFGTRTMLEALSKTTIPEGKILDLGTGY 77

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G V +A+ K+        VD++ +AL++A+ NA  N V++     QSD + ++   + +I
Sbjct: 78  GVVGIAVAKKFKR-TVDMVDVNERALQLARVNAKKNNVADVTHIFQSDVYDNISEQYGLI 136

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           + NPP                            G     ++      HL   G     + 
Sbjct: 137 LVNPPIRA-------------------------GKKVVTSMLQEAKLHLQPGGKLIAVLQ 171

Query: 229 YNQKV--DVVRIFESRKLFLVNAFKD 252
             Q        + E+     V   KD
Sbjct: 172 KKQGAPSAQKNMAEAFGNAQV-IHKD 196


>gi|301624008|ref|XP_002941300.1| PREDICTED: hemK methyltransferase family member 2 [Xenopus
           (Silurana) tropicalis]
          Length = 215

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 13/202 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           +D ++P  +T LL+D AL      ++ R  +  L++G G+G V   +          +  
Sbjct: 16  ADVYDPAEDTFLLLD-ALEKDAEELKSRVGIS-LEVGCGSGVVSAFIASLIGQKACYLCT 73

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A       A  N +        L +     ++G  D++V NPPY+ +        
Sbjct: 74  DINPVAAYCTLETARANQLHIEPIITDLVTGLLPRLQGHIDLLVFNPPYVVTP-----PE 128

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V + L+  G+  + +   N   +++       L
Sbjct: 129 EVGSHGIEAAWAGGKNGREVMDRFFPFVPKLLSPTGIFYLIVLKENNPDEILENMRMYGL 188

Query: 245 FLVNAFKDYGGNDR--VLLFCR 264
                     G +   VL FCR
Sbjct: 189 IGSKVLCRQAGRENLCVLKFCR 210


>gi|150398939|ref|YP_001322706.1| methyltransferase small [Methanococcus vannielii SB]
 gi|150011642|gb|ABR54094.1| methyltransferase small [Methanococcus vannielii SB]
          Length = 198

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 73/212 (34%), Gaps = 38/212 (17%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  IL  + F        S  F P+      +D      +  +E      +LD+G G G 
Sbjct: 17  ISGILRGKRF---SFKTDSGVFSPKK-----IDKGTEILVNELELLSSDDVLDIGCGYGV 68

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVI 168
           V ++++ E         DI+ +++ +AK N   N +S+   D +Q D + +V+   +D+I
Sbjct: 69  VGISIVAEVN--SITMTDINKRSVNLAKHNLKLNNISDKNIDVVQGDVYENVKCKNYDII 126

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +SNPP                            G      I       L ++G   + I 
Sbjct: 127 ISNPPI-------------------------KAGKDLIHRIITEGHLILKENGSIWMVIQ 161

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                  +  F       V       G  RVL
Sbjct: 162 TKHGAKSLAKFLEGVFGNVETIT-ISGGYRVL 192


>gi|20094927|ref|NP_614774.1| rRNA/ tRNA methylase [Methanopyrus kandleri AV19]
 gi|19888169|gb|AAM02704.1| Predicted rRNA/ tRNA methylase [Methanopyrus kandleri AV19]
          Length = 196

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 38/198 (19%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  ++L +  + + P  ++ LL +                R+LD+GTG G   L+   + 
Sbjct: 11  YGRLKLLVFENVYPPAEDSFLLAE--------HQGVSGSERVLDVGTGCGIQGLSAAAK- 61

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
              + V  D++  A+  A+ NA  N +    D    D F  V +  FD+++ NPPY+   
Sbjct: 62  -GCEVVATDVNPAAVHCARWNAHLNDL--NIDVRVGDLFEPVRDERFDIVLFNPPYLPGR 118

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            +       R  +            +  R         L +      EI +++   VV  
Sbjct: 119 ELPGSDPISRATEDP----------AVIRRFL---KDLLRE------EIRWDEARIVVSS 159

Query: 239 FESRKL------FLVNAF 250
              +K       F V   
Sbjct: 160 LTPKKYLEPLQRFEVEIV 177


>gi|78706836|ref|NP_001027221.1| CG9960 [Drosophila melanogaster]
 gi|7295917|gb|AAF51216.1| CG9960 [Drosophila melanogaster]
 gi|17861576|gb|AAL39265.1| GH13185p [Drosophila melanogaster]
 gi|220944536|gb|ACL84811.1| CG9960-PA [synthetic construct]
 gi|220954408|gb|ACL89747.1| CG9960-PA [synthetic construct]
          Length = 224

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++        +EP  ++ LL+D AL   L  +++      ++LG+G+G +  AL K+   
Sbjct: 8   HLSPEDFEHVYEPAEDSFLLLD-ALEKDLEYLDRLQPSLCVELGSGSGVIITALAKKLAG 66

Query: 122 FKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
           F   +  DI+ KA    +  A  NG   R D+++     ++     DV++ NPPY+ +  
Sbjct: 67  FSLCLATDINPKACNATRRTATRNGA--RLDSIRCSLADALRPRSVDVLLFNPPYVVTSD 124

Query: 180 VDCLGLEVRDF-DPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQ 231
            +    +     +         S  GG DG      +   +   L+  G+   + +  N+
Sbjct: 125 EELQTQQFDSHSESSTDRNLVFSWAGGQDGRRVTDILLKQLDDILSPRGVLYLLLLRENK 184

Query: 232 KVDVVRIFESRKLFLVNA 249
             ++++  E  +   V  
Sbjct: 185 PEEIIKYLEGLQFRAVKF 202


>gi|134085718|ref|NP_001076982.1| N(6)-adenine-specific DNA methyltransferase 1 [Bos taurus]
 gi|133778119|gb|AAI23688.1| N6AMT1 protein [Bos taurus]
 gi|296491636|gb|DAA33669.1| N-6 adenine-specific DNA methyltransferase 1 [Bos taurus]
          Length = 214

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 77/212 (36%), Gaps = 20/212 (9%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G  DF        SD +EP  +T L      A      E   V   L++G+G+G
Sbjct: 9   PLHGHVGRGDF--------SDVYEPAEDTFL---LLDALEAAAAELTGVEICLEVGSGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  D++ +A       A  N V  +     L       ++   D
Sbjct: 58  VVSAFLASVIGPQALYMCTDVNPEAAACTLETARCNKVHIQPIITDLVKGLLPRLKESVD 117

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV     + +  GG +G              L+  GL  + 
Sbjct: 118 LLVFNPPYVVTP-----PEEVGSRGIQAAWAGGRNGREVIDRFLPLAPDLLSPRGLFYLV 172

Query: 227 -IGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
            I  N   ++++I +++ L          G +
Sbjct: 173 TIKENNPEEILKIMKTKGLQGTTVLSRQAGQE 204


>gi|312873656|ref|ZP_07733703.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325911620|ref|ZP_08174028.1| methyltransferase small domain protein [Lactobacillus iners UPII
           143-D]
 gi|311090909|gb|EFQ49306.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2052A-d]
 gi|325476606|gb|EGC79764.1| methyltransferase small domain protein [Lactobacillus iners UPII
           143-D]
          Length = 204

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDDQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|226228550|ref|YP_002762656.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226091741|dbj|BAH40186.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 546

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 14/137 (10%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +      R+L+L +GTG   L   K         VDI+ +    A  NA  N + E 
Sbjct: 186 LATLPPSRGKRVLELCSGTGVATLMAAKAGAT-HAWAVDITERCTHFAAFNARLNDL-EH 243

Query: 150 FDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +LQ D ++ +EG  FD IV++PPYI S   + +             DGG DG    R 
Sbjct: 244 VTSLQGDLYAPLEGQQFDCIVAHPPYIPSTSTEIIYR-----------DGGEDGEQITRA 292

Query: 209 IADGVSRHLNKDGLCSV 225
           I   +  +L  DG+   
Sbjct: 293 IIGKLPEYLALDGIFHC 309


>gi|258624702|ref|ZP_05719636.1| Predicted O-methyltransferase [Vibrio mimicus VM603]
 gi|258582989|gb|EEW07804.1| Predicted O-methyltransferase [Vibrio mimicus VM603]
          Length = 239

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 10/151 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+G GTG + L   +     +   +DI   A    + N+  +  + R   LQ+D
Sbjct: 42  PPTSILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYLATEKNSDNSPWANRIQCLQTD 101

Query: 157 W-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +      F  I+ NPPY  S          R             G   ++ + + + +
Sbjct: 102 IRYWHPPQCFSAIICNPPYFNSGETA--QQFARA-------TARHTGSLKHQELIECLPQ 152

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L  DG+ S  +   +    + + +   L+L
Sbjct: 153 LLEPDGVASFILPKTEGDQFIALAQQAGLYL 183


>gi|312872218|ref|ZP_07732291.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092302|gb|EFQ50673.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2062A-h1]
          Length = 204

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSARK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|161526070|ref|YP_001581082.1| methyltransferase small [Burkholderia multivorans ATCC 17616]
 gi|189349215|ref|YP_001944843.1| methylase [Burkholderia multivorans ATCC 17616]
 gi|160343499|gb|ABX16585.1| methyltransferase small [Burkholderia multivorans ATCC 17616]
 gi|189333237|dbj|BAG42307.1| methylase [Burkholderia multivorans ATCC 17616]
          Length = 377

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           S++  R+   L  A     K   I  + G        +      F P R E   LV    
Sbjct: 141 SMVSLRELLGLVGAHEWRKKGVPIPALGGAA------IHPHYGVFSPVRGEYVTLV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RVVATDQDPRALACARENLERLGY 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + R D +++D F    G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 AGRVDVVEADLFPP--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLAAHLEPGGEGWLIL 313


>gi|125717866|ref|YP_001034999.1| hypothetical protein SSA_1034 [Streptococcus sanguinis SK36]
 gi|125497783|gb|ABN44449.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
 gi|327489168|gb|EGF20961.1| methyltransferase domain protein [Streptococcus sanguinis SK1058]
          Length = 195

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 37/180 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG R    +     +  F     ++ ++D      L  ++     R+LD+G G G + L
Sbjct: 23  LLGQR----LTFLTDAGVF-----SKKMIDYGSRVLLSVLDFEAEERVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K         VDI+ +AL++A+ NA  N VS      QS+ +  V G+FD I+SNPP
Sbjct: 74  TLAKAHGVA-ATMVDINQRALDLAQKNAERNQVSAHI--FQSNVYEKVSGIFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      +  G   HL + G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEVISGSYEHLIEGGDLTLVIQKKQGA 165


>gi|261392506|emb|CAX50057.1| putative methyltransferase [Neisseria meningitidis 8013]
          Length = 306

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 99  GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 151 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 209 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 243


>gi|312875748|ref|ZP_07735743.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2053A-b]
 gi|311088740|gb|EFQ47189.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           2053A-b]
          Length = 204

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 35/184 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFCSDCYRNLDDQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFES 241
             E 
Sbjct: 179 CLEQ 182


>gi|309805440|ref|ZP_07699487.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           09V1-c]
 gi|312870886|ref|ZP_07730991.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           3008A-a]
 gi|329920991|ref|ZP_08277519.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           1401G]
 gi|308165258|gb|EFO67494.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           09V1-c]
 gi|311093576|gb|EFQ51915.1| methyltransferase small domain protein [Lactobacillus iners LEAF
           3008A-a]
 gi|328935267|gb|EGG31747.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           1401G]
          Length = 204

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|222153103|ref|YP_002562280.1| methyltransferase [Streptococcus uberis 0140J]
 gi|222113916|emb|CAR42122.1| putative methyltransferase [Streptococcus uberis 0140J]
          Length = 196

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 69/189 (36%), Gaps = 35/189 (18%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  +       +LD+G G G + ++L K     +
Sbjct: 29  TFYTDSGVF-----SKKMIDYGSQVLLQTLLFDKGDTVLDVGCGYGPLGISLAKAQ-GVQ 82

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+E+AK NAV N VS      QS+ +  V G FD ++SNPP          
Sbjct: 83  ATLVDINNRAIELAKKNAVINNVSA--TIFQSNIYEKVSGTFDHVISNPPIRA------- 133

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESR 242
                             G      I +     LNK G  ++ I   Q         E+ 
Sbjct: 134 ------------------GKKVVHEIIEKSQLFLNKGGDLTIVIQKKQGAPSAKEKMENM 175

Query: 243 KLFLVNAFK 251
               V+  K
Sbjct: 176 -FGNVHILK 183


>gi|163792422|ref|ZP_02186399.1| Predicted O-methyltransferase [alpha proteobacterium BAL199]
 gi|159182127|gb|EDP66636.1| Predicted O-methyltransferase [alpha proteobacterium BAL199]
          Length = 253

 Score = 90.9 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 18/201 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +PR    + VD  L      +  R   R+LDLG G GAV L LL   P    V V+   
Sbjct: 24  LQPRDGYRVAVDPVL--LAASVPVRAEQRVLDLGCGAGAVFLCLLARFPQLSVVAVERDP 81

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N   NGV+ER   + +D      S     FD +V+NPP++ +   D      
Sbjct: 82  TMAGLARDNVARNGVAERATVVTADLSALPASWEMAAFDQVVTNPPFLPANRADPSPQPG 141

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           R          G++  +      D   R L   G  SV    ++  D++     R    +
Sbjct: 142 RAS-------AGVEATADLGVWIDRAHRCLKPKGRISVIHRVDRLDDLLAALAGR-FGGI 193

Query: 248 NAFKDY--GGND--RVLLFCR 264
             F  +   G D  R+++  R
Sbjct: 194 VVFPLWPKAGRDAKRLIVTAR 214


>gi|323706288|ref|ZP_08117854.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534340|gb|EGB24125.1| methyltransferase small [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 248

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L    D F+   +  LL +            +   +I+DLG GTG + + +  +S  
Sbjct: 15  GLKLIQREDMFKFGMDAVLLSNFVYT--------KRGDKIVDLGCGTGIIPILIAGKSRD 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            + VGV+I  +   IA  N   N    R D +  D  + V+      +D++ SNPPY+  
Sbjct: 67  TRIVGVEIQSEVANIAIRNVYLNNFEGRIDIINDDIRNVVDKLGIEKYDIVTSNPPYMRH 126

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                 +     +  ++    L+GG+D            SR L   G   +  
Sbjct: 127 KTGFDKNSESENISRYE----LNGGLD------DFIKVASRLLKFGGKFFLVH 169


>gi|239926646|ref|ZP_04683599.1| modification methylase, HemK family protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291434962|ref|ZP_06574352.1| modification methylase [Streptomyces ghanaensis ATCC 14672]
 gi|291337857|gb|EFE64813.1| modification methylase [Streptomyces ghanaensis ATCC 14672]
          Length = 114

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 2/111 (1%)

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D  + ++G  D++ +NPPY+   +V  +  E     P  ++  G DGL+  R +    
Sbjct: 3   DPDLLAELDGTVDLVTANPPYVPERLV--IPAEWSVHQPAQAIYSGWDGLTVPRAVVATA 60

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +R L   G+ ++E       ++V +  S     V +  D+ G  R ++  R
Sbjct: 61  ARLLKDGGVLAMEHYDAIVDEIVELVRSAGFESVTSHVDHDGFPRYVIARR 111


>gi|91226789|ref|ZP_01261442.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01]
 gi|91188920|gb|EAS75204.1| hypothetical protein V12G01_13469 [Vibrio alginolyticus 12G01]
          Length = 239

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 10/161 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            ++  +  +ILD+GTGTG + L   +     +   VDI   A+  A+ N   +  S+R  
Sbjct: 37  WVQSPNDAKILDIGTGTGLLALMCAQRFTEAQITAVDIELTAVAAAQKNMAQSPWSDRVS 96

Query: 152 TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              +D         F  I+ NPPY  S                 +     D L H   + 
Sbjct: 97  VHHTDILHFTPTHPFQRIICNPPYFNSGEQSKHSQ--------RATARHTDTLGH-NALL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                 L+ +G  S  +   +    + +  ++  +L    +
Sbjct: 148 QRCYHLLDDEGRASFVLPITEGEQFIELALNQSWYLSRICR 188


>gi|304320585|ref|YP_003854228.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis
           HTCC2503]
 gi|303299487|gb|ADM09086.1| hypothetical protein PB2503_05057 [Parvularcula bermudensis
           HTCC2503]
          Length = 248

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 79/226 (34%), Gaps = 41/226 (18%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           D++     RF+  + + +  +     R+            +    ++P    +       
Sbjct: 5   DTISTPIMRFWYWH-VAQLTQRMPSVRL------GGKEFVVYKGVYKPLENEQ------- 50

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                        R+LDLGTG G V      E    + V  D+S  AL  A  N    GV
Sbjct: 51  ---SCAAYCNHGDRVLDLGTGCG-VGAYFCSEKAD-QIVASDVSATALANAAENCRRFGV 105

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRI--SLDGGIDG 202
           +   +   SD F +++G FD+I++NPPY  +     +        + PR+  +LD     
Sbjct: 106 T-NVEFRHSDMFDNIQGRFDLILANPPYLNLSFDEPEKQFATSTRYLPRLFTALD----- 159

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                       +HL   G   V+        +  + E+    LV 
Sbjct: 160 ------------QHLAPGGRVLVQYPAWFAHRLTALAEAYGFRLVE 193


>gi|16077174|ref|NP_387987.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221307918|ref|ZP_03589765.1| hypothetical protein Bsubs1_00550 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312239|ref|ZP_03594044.1| hypothetical protein BsubsN3_00545 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317173|ref|ZP_03598467.1| hypothetical protein BsubsJ_00550 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321436|ref|ZP_03602730.1| hypothetical protein BsubsS_00550 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|586914|sp|P37872|YBXB_BACSU RecName: Full=Uncharacterized protein ybxB; AltName: Full=ORF23;
           AltName: Full=P23
 gi|402362|gb|AAB00971.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|2632373|emb|CAB11882.1| ribosomal RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 201

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 50/207 (24%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   T  S  F  +     + LL+DS   F  P +E      ILD+G G G + L+L  +
Sbjct: 27  DFTFTSDSGVFSKKEVDFGSRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASD 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
                   +D++ +A+E++  NA  NG++      QSD FS+V+    F  I++NPP   
Sbjct: 80  FKDRTIHMIDVNERAVELSNENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +  + HL   G   + I   Q     
Sbjct: 139 -------------------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSA 173

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              +  +F       + +  +++ A K
Sbjct: 174 IEKLEELFDEVSVVQKKKGYYIIKAKK 200


>gi|77409396|ref|ZP_00786095.1| Methyltransferase small domain family [Streptococcus agalactiae
           COH1]
 gi|77172005|gb|EAO75175.1| Methyltransferase small domain family [Streptococcus agalactiae
           COH1]
          Length = 156

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 31/174 (17%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           ++D      L  +       +LDLG G G + ++L K     K   VDI+ +ALE+AK N
Sbjct: 1   MIDYGSQVLLNSLHFEKNKSLLDLGCGYGPLGISLAK-VQGVKATMVDINTRALELAKKN 59

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A  NGV    +  QS+ + ++   FD I+SNPP                           
Sbjct: 60  ATRNGVV--VEVFQSNIYENISKTFDYIISNPPIRA------------------------ 93

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLVNAFKD 252
            G     +I +    +LN  G  ++ I   Q       ++ ++     +   KD
Sbjct: 94  -GKQVVHSIIEESICYLNTGGSLTIVIQKKQGAPSAKAKMLDTFGNCDI-LKKD 145


>gi|332229365|ref|XP_003263861.1| PREDICTED: hemK methyltransferase family member 2-like isoform 1
           [Nomascus leucogenys]
          Length = 214

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       ++   D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLKEKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 F 245
            
Sbjct: 192 Q 192


>gi|226328150|ref|ZP_03803668.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
 gi|225203854|gb|EEG86208.1| hypothetical protein PROPEN_02041 [Proteus penneri ATCC 35198]
          Length = 252

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
                ++ R LD+GTG+G + L L + +   +   G+++  KA   A  NA  +      
Sbjct: 43  WAPINNIKRALDIGTGSGLIALMLAQRANKVECIDGIELDEKAALQATENAQESQWHSLI 102

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               SD        +  +D+IVSNPPY   ++       E   +   ++ +G        
Sbjct: 103 HIYHSDIHHYAEQAQNKYDLIVSNPPYFEPAIACRNDVREQARYTKTLTHEG-------- 154

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGND--RVLLF 262
             + D     + +DGL  V + Y+     + I E ++  +V     KD       R+LL 
Sbjct: 155 --LLDSAQLLITEDGLFCVVLPYSIGEQFIEIAEKKEWNVVKRVNIKDSADKPYHRILLA 212


>gi|309810081|ref|ZP_07703927.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169580|gb|EFO71627.1| methyltransferase small domain protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 204

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 68/184 (36%), Gaps = 35/184 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDDQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     +HL   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKHLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFES 241
             E 
Sbjct: 179 CLEQ 182


>gi|237802005|ref|ZP_04590466.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024862|gb|EGI04918.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 237

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 25/167 (14%)

Query: 62  NVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            V L L  + + P     + LLV++  + +L R        +LDLG G+G + ++L    
Sbjct: 49  GVELFLPPNVYHPGTGLSSSLLVEALSSENLGRA-------VLDLGCGSGYIGISL--YR 99

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P    V  DIS  ++  +  N     +  R   L+SD FS+++G  FD I+ NPP ++  
Sbjct: 100 PGMDLVLADISKDSILSSTENLRRMEIPGRV--LESDLFSNLKGLRFDTILFNPPLLDKK 157

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           I         + +  I+L    +G            +HL   G    
Sbjct: 158 I---------EHEAEIALC-DPNG-DLLTRFLTEAPQHLISTGCIYF 193


>gi|116512245|ref|YP_809461.1| 16S RNA G1207 methylase RsmC [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116107899|gb|ABJ73039.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 227

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 44/202 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R       F     ++  +D      L   +      +LD+G G G + L L K+   
Sbjct: 58  SMRFKTDRGVF-----SKNGIDYGSRVLLEDYQPEGAKTLLDVGCGYGTLGLTLAKKF-D 111

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +AL++ + NA+ N VS   +   S+ + +V   +D I+SNPP        
Sbjct: 112 LSVTMVDVNSRALDLCRQNAIDNAVSNT-EIELSNIYEAVSEKYDAIISNPPIRA----- 165

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVV 236
                               G      I  G   +LN  G  ++ I   Q        + 
Sbjct: 166 --------------------GKEVVHEILTGAFDYLNDGGHLTIVIQKKQGAPSAQRKME 205

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F         +  F++ ++K
Sbjct: 206 EVFGNCQLVARDKGYFILRSYK 227


>gi|270489799|ref|ZP_06206873.1| methyltransferase small domain protein [Yersinia pestis KIM D27]
 gi|270338303|gb|EFA49080.1| methyltransferase small domain protein [Yersinia pestis KIM D27]
          Length = 226

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      R+LD+G G+G + L + + S P  +  GV++   A + A SN   +  +ER 
Sbjct: 20  WVPVLHARRVLDIGCGSGLIALMIAQRSLPQVQIDGVELEPAAAQQASSNVELSPWAERI 79

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    I      E RD            G   + 
Sbjct: 80  HIHQQDIHQFAENHPHQYDLIVSNPPYFAPAIACR--DEARD-------TARYTGSLTHD 130

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + +   ++  R+   +  F V      +D  G    R+LL
Sbjct: 131 ALLNCAEKLITEDGMFCVVLPHELGIEFARLAGQQGWF-VRCQVDIRDRPGKPLHRMLL 188


>gi|161870075|ref|YP_001599245.1| hypothetical protein NMCC_1113 [Neisseria meningitidis 053442]
 gi|161595628|gb|ABX73288.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 306

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P     L         L            D+GTG+G +   L K+   
Sbjct: 99  GGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG-I 150

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              +G D + KA+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +    
Sbjct: 151 PSVIGTDTNPKAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPTS 208

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  E   +DP  +                   +HLN DG   + I
Sbjct: 209 AV--ESALYDPESA---------MLAAFLRDAPKHLNPDGEIRLII 243


>gi|23097566|ref|NP_691032.1| hypothetical protein OB0111 [Oceanobacillus iheyensis HTE831]
 gi|22775789|dbj|BAC12067.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 204

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 72/225 (32%), Gaps = 45/225 (20%)

Query: 34  QRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP-----ETELLVDSALAF 88
           Q       + + L  E      G  +        +SD            + LL++     
Sbjct: 5   QSITFPTILSQKLHRE-----RGCMNLRGRTFHFTSDVGVFSKNDIDFGSRLLIEQF--- 56

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E +    ILD+G G G + L+L  E        VDI+ +A+E+AK NA  N ++ 
Sbjct: 57  ----QEPQINGDILDVGCGYGPIGLSLAAEFEDRAVSMVDINDRAVELAKRNASVNNIT- 111

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                 SD +S++     F  +V+NPP                            G    
Sbjct: 112 NVTIQTSDIYSAIGETLRFAAVVTNPPIRA-------------------------GKKVV 146

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             I +G    L  +G   V I   Q     +   +     V   K
Sbjct: 147 HQIFEGAKDLLLPNGELWVVIQKKQGAPSAKDKLNEVFGNVEIVK 191


>gi|262831180|sp|Q7MNQ4|TRMN6_VIBVY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 239

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 10/156 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+GTGTG + L   +         VDI   A+E A+ N   +    R  
Sbjct: 37  WADFHHSQNLLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLH 96

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               D    +    FD I+ NPPY  S                 +     D L+H   + 
Sbjct: 97  LQHGDVLKLNFTHRFDGIICNPPYFNSGEQAQATQ--------RATARHTDTLAH-DALL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 L  +G  +  +   +    +++ + +   L
Sbjct: 148 LRCRELLTPNGKANFVLPLTEGEQFLQLAQQQGWHL 183


>gi|37678845|ref|NP_933454.1| O-methyltransferase [Vibrio vulnificus YJ016]
 gi|37197586|dbj|BAC93425.1| predicted O-methyltransferase [Vibrio vulnificus YJ016]
          Length = 253

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 10/156 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+GTGTG + L   +         VDI   A+E A+ N   +    R  
Sbjct: 51  WADFHHSQNLLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLH 110

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               D    +    FD I+ NPPY  S                 +     D L+H   + 
Sbjct: 111 LQHGDVLKLNFTHRFDGIICNPPYFNSGEQAQATQ--------RATARHTDTLAH-DALL 161

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 L  +G  +  +   +    +++ + +   L
Sbjct: 162 LRCRELLTPNGKANFVLPLTEGEQFLQLAQQQGWHL 197


>gi|149278374|ref|ZP_01884511.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
 gi|149230744|gb|EDM36126.1| hypothetical protein PBAL39_19624 [Pedobacter sp. BAL39]
          Length = 235

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 65/151 (43%), Gaps = 10/151 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RILD+GTGTG + L L +  P  +   V+I   A E A  N  ++  S R     + 
Sbjct: 37  DSGRILDIGTGTGVIALMLAQRFPLAQVDAVEIDGVAAERAGLNFRSSDFSSRTTAHHTS 96

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    +D+IVSNPP+  + + +    EVR    R + +   DGL          + 
Sbjct: 97  IMDYESTHPYDLIVSNPPFFVNDLKN---PEVRKGIARHADEQFFDGL------LTKAAE 147

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L  DG+  + +   Q   ++    S  LFL
Sbjct: 148 LLASDGVFWLILPVKQADWMLNSAASFNLFL 178


>gi|321313777|ref|YP_004206064.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5]
 gi|320020051|gb|ADV95037.1| ribosomal RNA methyltransferase [Bacillus subtilis BSn5]
          Length = 201

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 50/207 (24%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   T  S  F  +     + LL+DS   F  P +E      ILD+G G G + L+L  +
Sbjct: 27  DFTFTSDSGVFSKKEVDFGSRLLIDS---FEEPEVEGG----ILDVGCGYGPIGLSLASD 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
                   +D++ +A+E++  NA  NG++      QSD FS+V+    F  I++NPP   
Sbjct: 80  FKDRSIHMIDVNERAVELSNENAEQNGIT-NVKIYQSDLFSNVDSAQTFASILTNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +  + HL   G   + I   Q     
Sbjct: 139 -------------------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSA 173

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              +  +F       + +  +++ A K
Sbjct: 174 IEKLEELFDEVSVVQKKKGYYIIKAKK 200


>gi|319399710|gb|EFV87959.1| uncharacterized protein ybxB [Staphylococcus epidermidis FRI909]
          Length = 202

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 73/205 (35%), Gaps = 46/205 (22%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + LT  +  F        ++LL+       L          I D+G G G + LA+ K S
Sbjct: 27  LELTTDAGVFSKDSVDFGSDLLI----KTFLKEHPPGPSKTIADVGCGYGPIGLAIGKAS 82

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  +   +DI+ +AL +A+ N   N V +    ++S+  S+V    FD I++NPP     
Sbjct: 83  PHHQITMLDINNRALALAEMNKTKNQV-DNVTIMESNCLSAVNHQCFDYILTNPPIRA-- 139

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----V 233
                                  G      I +     L   G   V I   Q       
Sbjct: 140 -----------------------GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKK 176

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  +F       +S+  +++ + K
Sbjct: 177 KIEELFGNVEIIDKSKGYYILKSIK 201


>gi|301793981|emb|CBW36379.1| putative methyltransferase [Streptococcus pneumoniae INV104]
          Length = 193

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 78/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ +  VEG FD ++SNPP
Sbjct: 71  SLVKVY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYEQVEGHFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|194290563|ref|YP_002006470.1| methyltransferase, methylase of polypeptide chain release factors
           [Cupriavidus taiwanensis LMG 19424]
 gi|193224398|emb|CAQ70409.1| putative methyltransferase, putative Methylase of polypeptide chain
           release factors [Cupriavidus taiwanensis LMG 19424]
          Length = 385

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 26/189 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +        P     +D   A  LP           D+GTGTG +  A+L      
Sbjct: 177 LEDRIHPWYGVFSPVRGEYIDLVAAEPLPA-----TTLAFDIGTGTGVLA-AVLARRGVH 230

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  D   +AL  A+ N    G + + + +++D F +  G   ++V NPP++ +     
Sbjct: 231 RVVATDQDARALACARENIARLGYAAQVEVIEADLFPA--GRAPLVVCNPPWVPARPSSP 288

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDV 235
           +   V  +DP  +           R    G++ HL     G   +    E  G  Q+ ++
Sbjct: 289 VERAV--YDPDST---------MLRGFLQGLAEHLEPGGEGWLLLSDLAEHLGLRQRDEL 337

Query: 236 VRIFESRKL 244
           +   E+  L
Sbjct: 338 MGWIEAAGL 346


>gi|109065620|ref|XP_001103046.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1 isoform 1
           [Macaca mulatta]
          Length = 214

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       ++   D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHVQPVITDLVKGLLPRLKEKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 F 245
            
Sbjct: 192 Q 192


>gi|304382913|ref|ZP_07365395.1| metallothionein SmtA [Prevotella marshii DSM 16973]
 gi|304335938|gb|EFM02186.1| metallothionein SmtA [Prevotella marshii DSM 16973]
          Length = 232

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 10/139 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +RILD+GTGTG + L + +        G+DI   A   A  N   +  ++R +  ++  
Sbjct: 36  GMRILDIGTGTGLIALMMAQRFQQAMVTGIDIDTAACRQAWENVKASPFADRVEIQETSV 95

Query: 158 FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            S +    FD IVSNPP+  +         +R+ D + ++    D LS YR +     R 
Sbjct: 96  QSYMPSEAFDAIVSNPPFFVNS--------LRNPDKQRAVARHTDTLS-YRELFAHAYRL 146

Query: 217 LNKDGLCSVEIGYNQKVDV 235
           L   G+ S+ +      DV
Sbjct: 147 LTAVGIFSIIVPAEMWEDV 165


>gi|326328870|ref|ZP_08195204.1| putative transferase [Nocardioidaceae bacterium Broad-1]
 gi|325953355|gb|EGD45361.1| putative transferase [Nocardioidaceae bacterium Broad-1]
          Length = 492

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L +  A         + +V   LDLGTG G   L L   S   + V  D++ +AL 
Sbjct: 129 PEHVLGISPASTSLAQLTIRDEVGTALDLGTGCGVQALHLATHSD--RVVATDVNQRALW 186

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           I   NA  N V++R D     +F  V G  FD+I +NPP++ S             +  +
Sbjct: 187 ITAFNAALNDVADRIDVRDGSFFEPVAGERFDLIATNPPFVISPATG---------ERLV 237

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D G+ G      I       L + G C +
Sbjct: 238 YRDSGLPGDRVVEDIVRAAPGMLTEGGWCQI 268


>gi|62390757|ref|YP_226159.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
 gi|21324687|dbj|BAB99310.1| Predicted rRNA or tRNA methylase [Corynebacterium glutamicum ATCC
           13032]
 gi|41326095|emb|CAF20258.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
          Length = 511

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 21/187 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  L V +A    L          +LDLGTG+G   L     +   + +  D+  +
Sbjct: 133 VPGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLGQAGAAQ--EIIATDVHPR 190

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL+ A++  V +G+  +   ++  WF  V G  FD I++NPP++          E+    
Sbjct: 191 ALDFAEATLVDSGIPTQ--LVEGSWFEPVRGRTFDRIIANPPFVVG------PPEIG--- 239

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQ--KVDVVRIFESRKLF 245
             +  D G+D       +      HLN  G   +        +Q  +  V          
Sbjct: 240 -HVYRDSGMDLDGATALVVKEACAHLNPGGTAHLLGAWVHSADQSWQQRVAEWLPDNGYV 298

Query: 246 LVNAFKD 252
                +D
Sbjct: 299 AWVIERD 305


>gi|304315614|ref|YP_003850759.1| methyltransferase small [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777116|gb|ADL67675.1| methyltransferase small [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 248

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 69/173 (39%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++    + F+   +  LL +            +   +I+DLG GTG + + +  +S  
Sbjct: 15  GLKIIQHENKFKFGMDAILLSNFVYT--------KRGDKIIDLGCGTGIIPILIAGKSSN 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
               GV+I     +IAK N V N +++R + +  D  + V+      +D++ +NPPY+  
Sbjct: 67  THVTGVEIQRDVADIAKRNVVLNNLTDRIEIINDDIRNIVDKLGVEKYDIVTTNPPYMPH 126

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                       +  ++    ++GG       +      S+ L   G   +  
Sbjct: 127 KTGFDKSNESENISRYE----INGG------LQDFVKVASKLLKFGGKFFMVH 169


>gi|294085839|ref|YP_003552599.1| putative O-methyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665414|gb|ADE40515.1| Predicted O-methyltransferase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 253

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L     +   RILD+G G G V L + K  P      V+I    L +A+ N   N +
Sbjct: 34  AILLAAAVPQRTKRILDMGCGVGGVALCIAKRLPDVHVTAVEIDPDMLALAERNIKDNNL 93

Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIES 177
           + +   L  D       +   FD +VSNPPY ++
Sbjct: 94  AAQIRLLTGDIKALSPVLANSFDHVVSNPPYHDT 127


>gi|227495667|ref|ZP_03925983.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
 gi|226830899|gb|EEH63282.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
          Length = 509

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 15/158 (9%)

Query: 68  SSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           SS T +P  +  +L +  A    L    +  V R+LDLGTG G + +     +   + V 
Sbjct: 137 SSVTGKPVEKDHVLGIGGATRTLLQATPRDQVGRVLDLGTGCGIIGMYAALHAD--EVVA 194

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLG 184
            DIS +A+ +A  NA  N V  +   +Q   F  ++G FD+I+SNPP++     + +   
Sbjct: 195 TDISARAVMLADFNAHLNEVKMQV--VQGSLFEPIKGDFDLILSNPPFVITPDSLRETGI 252

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           LE R        DGG  G S    +  G + HL + GL
Sbjct: 253 LEYR--------DGGQTGDSLVAQVVAGAAAHLREGGL 282


>gi|167763063|ref|ZP_02435190.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
           43183]
 gi|167699403|gb|EDS15982.1| hypothetical protein BACSTE_01429 [Bacteroides stercoris ATCC
           43183]
          Length = 236

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +DV RILD+G G+G + L L + +P      V+I   A   A+ N  ++  S R +
Sbjct: 32  WAPVQDVKRILDVGAGSGLISLQLAQRNPEAVITSVEIDPAAAAQAQENIQSSPWSNRME 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRTI 209
            +  D+     E  FD+IVSNPPY   V         R      S L+        Y  +
Sbjct: 92  VVCCDFRKYHPEDKFDLIVSNPPYF--VDALRCPDNQRCMARHTSELN--------YELL 141

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
               +  L++ G+ S+ I    +  V+         
Sbjct: 142 FGHSAHLLSEQGVISIIIPAEVERTVIDTAWKYNFH 177


>gi|302545244|ref|ZP_07297586.1| putative methyltransferase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462862|gb|EFL25955.1| putative methyltransferase [Streptomyces himastatinicus ATCC 53653]
          Length = 384

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 84/227 (37%), Gaps = 33/227 (14%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           SV+  R+   L  A     K   +  + G R        +        P     VD    
Sbjct: 148 SVISLRELLGLIGAHEWREKGVEVPALGGDR--------IHPYYGVFSPVRGEYVDLVAE 199

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             LP           D+GTG+G +   L +     + V  D   +AL  A+ N    G++
Sbjct: 200 APLPASRAAAF----DIGTGSGVLAAVLARRGIE-RVVATDQDERALACARENVARLGLA 254

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ER + +++D F    G   +IV NPP++ +       +E   +DP         G     
Sbjct: 255 ERVEVVRADLFPP--GRAPLIVCNPPWVPAR--PSSPVEYAVYDP---------GSRMLH 301

Query: 208 TIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              +G++  L  D  G   +    E  G   + +++  FES  L +V
Sbjct: 302 GFLNGLTDALTPDGEGWLILSDLAEHLGLRTREELLGAFESAGLRVV 348


>gi|326202932|ref|ZP_08192799.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782]
 gi|325987009|gb|EGD47838.1| Methyltransferase type 11 [Clostridium papyrosolvens DSM 2782]
          Length = 244

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 78/190 (41%), Gaps = 25/190 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +RL  +++ F    +  LL D A        + +   ++LD+GTGTG + + L  ++ 
Sbjct: 16  HGLRLIQNTEKFCFGVDAVLLSDFA--------DVKRNSKVLDIGTGTGIIPVLLAGKTK 67

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYIE 176
             K VG++I  +  E+A  +   N +SER + +Q D   +    G   FDV+VSNPPY  
Sbjct: 68  AAKIVGLEIQEEMAEMASRSVTLNQLSERLEIVQGDIKLYREYFGKSSFDVVVSNPPYTN 127

Query: 177 SV---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                I       +   +   SL            +    +  L   G  ++     +  
Sbjct: 128 KGCGLINPMDSKAISRHEILCSL----------EDVVSAAAALLVPGGQLAMVHRPERLA 177

Query: 234 DVVRIFESRK 243
           D++    +  
Sbjct: 178 DIICSMRNNG 187


>gi|237809368|ref|YP_002893808.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
 gi|237501629|gb|ACQ94222.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
          Length = 350

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 35/166 (21%)

Query: 63  VRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++++     F   E    T+LL+D     SLP +       ILD+G G G +  A+ + +
Sbjct: 183 LKISALPGVFSAGELDEGTQLLLD-----SLPALSGD----ILDVGCGAGVIGAAICQRT 233

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P    V  D++  AL  A      N +S +   + SD FS VE  FD I+SNPP+   + 
Sbjct: 234 PDANVVMTDVNALALLSATKTLEGNNLSAQV--IASDMFSDVEAKFDFIISNPPFHAGLK 291

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +++                        HL + G   +
Sbjct: 292 T--------NYE-------------ATERFLHQAPAHLKRGGQLFL 316


>gi|294791499|ref|ZP_06756656.1| putative methyltransferase small domain protein [Scardovia
           inopinata F0304]
 gi|294457970|gb|EFG26324.1| putative methyltransferase small domain protein [Scardovia
           inopinata F0304]
          Length = 243

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 15/179 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L D     +  + E R V   LDLG G G + LAL +E P  +   +D + +A+E+ 
Sbjct: 69  TQVLFDHVPGSAADQAEGRTVATCLDLGCGWGPISLALAREYPQARVWALDSNERAVELT 128

Query: 138 KSNAVTNGVS-----ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           ++NA  NG++      R D          +  FD+I SNPP    +  D L   +  + P
Sbjct: 129 QANANRNGLTTIAAGTRQDLEDRYGAEWTDASFDLIWSNPPI--RIGKDPLHNLLMTYLP 186

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           R+S +G    L   + +  G    L+     S E+G      V +   ++   ++   +
Sbjct: 187 RLSSNGYAY-LVVQKNL--GSDSLLS---WLSKELGN--GFSVRKYSSAKGYRIIEIHR 237


>gi|294668436|ref|ZP_06733536.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309589|gb|EFE50832.1| hypothetical protein NEIELOOT_00351 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 370

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 68/196 (34%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +    F P           L   +            D+GTG+G +  ALL +   
Sbjct: 162 GGRIHVPFGVFSPLRGEY------LDLLMRAELPPSFQTAFDIGTGSGVLA-ALLAKRGL 214

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D + +AL  A  N    G+  +     +D F   EG  D+IV NPP++ +    
Sbjct: 215 RQITATDNNPRALSCAGDNIRRLGLQRQIGIEAADLFP--EGCADLIVCNPPWLPAKPTS 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSV----EI-GYNQKVD 234
            +  E   +DP  +           R    G   HLN  G     +    E  G      
Sbjct: 273 AV--ETALYDPDHA---------MLRGFLHGARSHLNSGGEVWLIMSDLAEHLGLRAADF 321

Query: 235 VVRIFESRKLFLVNAF 250
           + R F++  L L+   
Sbjct: 322 LPRCFQTAGLSLIETL 337


>gi|242037567|ref|XP_002466178.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor]
 gi|241920032|gb|EER93176.1| hypothetical protein SORBIDRAFT_01g002920 [Sorghum bicolor]
          Length = 280

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 28/207 (13%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             D +EP  ++  LVD+ L+     +  +  +  +++G+G+G    ++ + L +     +
Sbjct: 49  HPDVYEPCDDSFALVDALLSDKAQLLTLQPRL-CMEVGSGSGYVITSLAIMLRQLGSGAQ 107

Query: 124 GVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  DI+  A E  ++    +GV        + S     + G+ DV V NPPY+ + +  
Sbjct: 108 YLATDINQHAAETTQATLEAHGVHADVIVTDIVSGLDKRLAGMVDVAVVNPPYVPTPV-- 165

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------------- 225
               EV       S  GG++G      I   V   L++ G   +                
Sbjct: 166 ---EEVGCKGIASSWAGGLNGRQVIDRILPAVREMLSERGWLYMVALEDNDPSDICHLMS 222

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           E+GY  +V + R  E   L+++  ++D
Sbjct: 223 EMGYASRVVLKRCTEEESLYVLKFWRD 249


>gi|241895206|ref|ZP_04782502.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
 gi|241871512|gb|EER75263.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
          Length = 212

 Score = 90.5 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 34/193 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
           +  T  +  F         VD      L    +     +ILDLG G G V ++L K  P 
Sbjct: 35  LTFTTDAGVFSKGT-----VDYGTRTMLMAFNQDIPAGKILDLGAGYGPVAISLAKVMPE 89

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
              V  +I+ +A+E+   NA  N V+++   +QSD +  V G F  I++NPP        
Sbjct: 90  RAFVAAEINARAVELVARNAEQNHVAQQISVIQSDRYEHVSGKFAAILTNPP-------- 141

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFE 240
                VR             G      +  G +  L   G  +V +   Q      ++  
Sbjct: 142 -----VRA------------GKQIVTDMITGAADRLVNGGTLTVVLQKKQGAPSAKKLMA 184

Query: 241 SRKLFLVNAF-KD 252
                 V    KD
Sbjct: 185 DL-FGNVQTIAKD 196


>gi|260771155|ref|ZP_05880082.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972]
 gi|260613752|gb|EEX38944.1| predicted O-methyltransferase [Vibrio furnissii CIP 102972]
          Length = 239

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L   +  P      VDI   A   A  N   +  + R    Q + 
Sbjct: 43  PQHILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSPWANRIQVAQQNI 102

Query: 158 F-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    D I+ NPPY                    +     D L+H   +   ++R 
Sbjct: 103 LQTQLNTPVDAIICNPPYFNDGQQSQHAQ--------RATARHTDRLNHGD-LLQAMARL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           L   G  S+ +   +    +   E +  FL  
Sbjct: 154 LTPLGTASLILPAVEGEQFIAQAEQQGWFLAR 185


>gi|91785360|ref|YP_560566.1| hypothetical protein Bxe_A0419 [Burkholderia xenovorans LB400]
 gi|91689314|gb|ABE32514.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 374

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP + K       D+GTGTG +  ALL +    K +
Sbjct: 169 RIHPHYGVFSPVRGEYVDLVARTPLPSLNKA-----FDIGTGTGVLA-ALLAKRGVKKII 222

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N    G   + + +Q+D F   EG   ++V NPP++ +     +  
Sbjct: 223 ATDQDPRALACARENLTRLGYDRQVEVVQADLFP--EGRAPLVVCNPPWLPARPASPIEY 280

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
            + D + R+ L G ++GLS           HL+    G   +
Sbjct: 281 AIYDPESRM-LLGFLNGLS----------EHLSPGGEGWLIM 311


>gi|13541022|ref|NP_110710.1| RNA methylase [Thermoplasma volcanium GSS1]
 gi|14324405|dbj|BAB59333.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 183

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 27/161 (16%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++++ +R+      +EP  +T LL+  A              R +++G GTG V +   K
Sbjct: 2   KEYFGIRIEECESVYEPSDDTFLLMQYAEC----------KGRAIEIGCGTGLVSIYFKK 51

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                +   VD++  A++  K NA  NGVS       SD F +  G++D ++ N PY+  
Sbjct: 52  RGCNIE--CVDLNQSAVDCTKRNAEINGVSLNV--YASDLFEAARGVYDTVLFNAPYLPV 107

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              D            ++  GG   +            H+N
Sbjct: 108 SDED------------MAWSGGK-SMELISRFLRESKNHIN 135


>gi|157690889|ref|YP_001485351.1| 16S rRNA methyltransferase [Bacillus pumilus SAFR-032]
 gi|157679647|gb|ABV60791.1| possible 16S rRNA methyltransferase [Bacillus pumilus SAFR-032]
          Length = 201

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 45/207 (21%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE 118
             TL + TF    ++ +     VD      +   E+ DV   +LD+G G G + L+L  E
Sbjct: 20  DFTLRNRTFTFTSDSGVFSKKEVDFGSRLLIEAFEEPDVDGDVLDVGCGYGPIGLSLANE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIE 176
                   +D++ +A+E++K NA  N + +     QSD FS+V     F  I++NPP   
Sbjct: 80  MTSRTIHMIDVNERAVELSKENAKHNRI-DNVRIYQSDLFSNVHSSAAFASILTNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I D  + HL  +G   V I   Q     
Sbjct: 139 -------------------------GKKVVHAIFDKSADHLLPEGELWVVIQKKQGGPSA 173

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              + ++F       + +  +++ A K
Sbjct: 174 IEKLEQLFGEVEVVLKKKGYYIIKAKK 200


>gi|5052364|gb|AAD38520.1|AF139682_1 putative N5-methyl-Gln methyltransferase [Homo sapiens]
 gi|119630344|gb|EAX09939.1| HemK methyltransferase family member 2, isoform CRA_a [Homo
           sapiens]
 gi|119630345|gb|EAX09940.1| HemK methyltransferase family member 2, isoform CRA_a [Homo
           sapiens]
 gi|189054274|dbj|BAG36794.1| unnamed protein product [Homo sapiens]
 gi|307686351|dbj|BAJ21106.1| N-6 adenine-specific DNA methyltransferase 1 [synthetic construct]
          Length = 214

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       +    D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNKVHIQPVITDLVKGLLPRLTEKVDLLVFNPPYVVTP-----PQ 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G          V   L+  GL  +  I  N   ++++I +++ L
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGL 191

Query: 245 F 245
            
Sbjct: 192 Q 192


>gi|167571422|ref|ZP_02364296.1| hypothetical protein BoklC_16389 [Burkholderia oklahomensis C6786]
          Length = 378

 Score = 90.2 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 34/210 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
             K   I  + G R        +        P     VD     SLP           D+
Sbjct: 159 RKKGVPIAALGGER--------IHPHYGVFSPVRGEYVDLVARASLPSTS-----LAFDI 205

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G GTG + + L       + V  D   +AL  A  N    G + + + +++D F   +G 
Sbjct: 206 GVGTGVLAVVLASRGVE-RVVATDQDPRALACAAENVARLGYASQVEIVEADLFP--DGR 262

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GL 222
             ++V NPP++ +       LE   +DP              +    G++ HL     G 
Sbjct: 263 APLVVCNPPWVPAR--PSSPLEYAIYDPDS---------RMLKGFLAGLAAHLAPGGEGW 311

Query: 223 CSV----EI-GYNQKVDVVRIFESRKLFLV 247
             +    E  G   + +++   ++  L +V
Sbjct: 312 LILSDFAEHLGLRTRDELLGWIDAAGLAVV 341


>gi|19553121|ref|NP_601123.1| rRNA or tRNA methylase [Corynebacterium glutamicum ATCC 13032]
          Length = 509

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 21/187 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  L V +A    L          +LDLGTG+G   L     +   + +  D+  +
Sbjct: 131 VPGPDHVLGVGAASLSLLQATPTSPTGSVLDLGTGSGIQVLGQAGAAQ--EIIATDVHPR 188

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL+ A++  V +G+  +   ++  WF  V G  FD I++NPP++          E+    
Sbjct: 189 ALDFAEATLVDSGIPTQ--LVEGSWFEPVRGRTFDRIIANPPFVVG------PPEIG--- 237

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQ--KVDVVRIFESRKLF 245
             +  D G+D       +      HLN  G   +        +Q  +  V          
Sbjct: 238 -HVYRDSGMDLDGATALVVKEACAHLNPGGTAHLLGAWVHSADQSWQQRVAEWLPDNGYV 296

Query: 246 LVNAFKD 252
                +D
Sbjct: 297 AWVIERD 303


>gi|116619370|ref|YP_821526.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
 gi|116222532|gb|ABJ81241.1| methyltransferase small [Candidatus Solibacter usitatus Ellin6076]
          Length = 488

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 15/136 (11%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  + +     +LDLGTG+G   L   K +      G DI+ +++  A+ N   NG+   
Sbjct: 136 LATLPETPCTALLDLGTGSGIAALDGAKYA--SHTWGTDIAARSVHFAEFNRRLNGIQ-N 192

Query: 150 FDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              LQ D ++ VEG  FD IV++PPY+ +     +             DGG DG    R 
Sbjct: 193 ATMLQGDLYAPVEGLTFDRIVAHPPYVPARQNAMIFR-----------DGGEDGEQILRG 241

Query: 209 IADGVSRHLNKDGLCS 224
           I +G+ R L   G   
Sbjct: 242 IVEGLPRFLRPGGRFY 257


>gi|21910406|ref|NP_664674.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS315]
 gi|21904604|gb|AAM79477.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 197

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 26  HPFTFLTDSGVF-----SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAK-VQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 80  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 134 ---------------------GKRVVHSIIEESIDFLVVNGDLTIVIQKKQGAPSAKAKM 172

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 173 ATIFGNVEILRKD 185


>gi|28895982|ref|NP_802332.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           SSI-1]
 gi|28811232|dbj|BAC64165.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 208

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 37  HPFTFLTDSGVF-----SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAK-VQ 90

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 91  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 144

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 145 ---------------------GKRVVHSIIEESIDFLVVNGDLTIVIQKKQGAPSAKAKM 183

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 184 ATIFGNVEILRKD 196


>gi|320157376|ref|YP_004189755.1| putative O-methyltransferase [Vibrio vulnificus MO6-24/O]
 gi|319932687|gb|ADV87551.1| predicted O-methyltransferase [Vibrio vulnificus MO6-24/O]
          Length = 239

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 10/156 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+GTGTG + L   +         VDI   A+E A+ N   +    R  
Sbjct: 37  WADFHHCQNLLDIGTGTGLLSLMCAQRYAHLSITAVDIDAHAMEAAQENFSHSPWHSRLH 96

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               D    +    FD I+ NPPY  S                 +     D L+H   + 
Sbjct: 97  LQHGDVLKLNFTHRFDGIICNPPYFNSGEQAQATQ--------RATARHTDTLAH-DALL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 L  +G  +  +   +    +++ + +   L
Sbjct: 148 LRCRELLTPNGKANFVLPVTEGEQFLQLAQQQGWHL 183


>gi|149192207|ref|ZP_01870424.1| predicted O-methyltransferase [Vibrio shilonii AK1]
 gi|148833965|gb|EDL50985.1| predicted O-methyltransferase [Vibrio shilonii AK1]
          Length = 240

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 60/161 (37%), Gaps = 10/161 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + RD   ILD+GTGTG + L + +     +   +DI   A++ A+ N   +    R  
Sbjct: 37  WAQYRDSTHILDIGTGTGLLSLMIAQRYSDAQITSIDIDAVAIQDAELNVNRSPWHSRVS 96

Query: 152 TLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L SD   +     F  I+ NPPY  S                 +     D LSH   + 
Sbjct: 97  LLHSDVLTTPFSESFSGIICNPPYFNSGEQSKNQ--------HRATARHTDTLSH-DQLL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           D     L+ +G  S  +   +    + I + +   L    +
Sbjct: 148 DACFNLLSDEGEASFVLPKVEGEQFIDIAQQKGWHLNRICQ 188


>gi|322411856|gb|EFY02764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 210

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 33/188 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  +      RILDLG G G + ++L K     +
Sbjct: 40  TFLTDSGVF-----SKKMIDFGSQVLLNTLRFNKGERILDLGCGYGPLGISLAK-VQDVE 93

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+++AK NA  N         QS+ + +V G F+ I+SNPP          
Sbjct: 94  ATLVDINNRAIDLAKKNARQN--QVNVTIFQSNIYENVRGSFNHIISNPPIRA------- 144

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                             G      I +     L+  G  ++ I   Q     +   +  
Sbjct: 145 ------------------GKKVVHEIIEKSIDFLDDQGDLTIVIQKKQGAPSAKEKMANI 186

Query: 244 LFLVNAFK 251
              V+  K
Sbjct: 187 FGNVDIIK 194


>gi|323143361|ref|ZP_08078049.1| methyltransferase small domain protein [Succinatimonas hippei YIT
           12066]
 gi|322416879|gb|EFY07525.1| methyltransferase small domain protein [Succinatimonas hippei YIT
           12066]
          Length = 353

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 61/164 (37%), Gaps = 29/164 (17%)

Query: 82  VDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L  + +  + ++ LDLG G G + L L K+         DIS +AL +A+ N
Sbjct: 198 VDEGTSLLLKNLPQNLNGLKALDLGCGCGIIGLYLAKK--GANVTFSDISAEALFLAELN 255

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A  N + E  +   S       G FDVI +NPP+ E +                      
Sbjct: 256 AKENDLKESCEFKASFMLDDAPG-FDVIATNPPFHEGIKKAE------------------ 296

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGY---NQKVDVVRIFES 241
                   +      HLNK G   + +G    N    +   FE 
Sbjct: 297 ---KVTLEMIKEAPNHLNKGGALYL-VGNSFLNYGPTLEEAFEK 336


>gi|256395760|ref|YP_003117324.1| methylase [Catenulispora acidiphila DSM 44928]
 gi|256361986|gb|ACU75483.1| methylase [Catenulispora acidiphila DSM 44928]
          Length = 215

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 17/164 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L +    ++PR +T+LL+D+     L R       R+LDLGT  G+  +A+       + 
Sbjct: 4   LFVPPGVYQPRSDTDLLIDALRNERLGR-----NCRVLDLGT--GSGAVAVAAARRGARV 56

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             VDIS +A+     N V +    R    + D+  ++  G FDV+VSNPPY+ S  +   
Sbjct: 57  TAVDISRRAVATTWVNGVLHRRFIRVR--RGDFLEALGPGRFDVVVSNPPYVPSQDLPVK 114

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           G          + D G  G      I     + L + G+  +  
Sbjct: 115 GS-------ARAWDAGPTGRYWLDRICAEAPKVLKRGGVLLLVH 151


>gi|309778357|ref|ZP_07673282.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308913888|gb|EFP59703.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 203

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 67/193 (34%), Gaps = 38/193 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +NV     +  F         VD     L  +L   E+    ++LD+G G G V +   K
Sbjct: 25  FNVSFITDNGVFSKDS-----VDFGTRVLLNTLHEHEEELGNQLLDMGCGYGVVGIVAKK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P  +   VD++ +A+E+AK NA  N +        SD +  V G  F  I++NPP   
Sbjct: 80  AWPDKQVEMVDVNPRAVELAKDNAEKNNIEANIHV--SDVYEQVSGNTFTDIITNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--D 234
                                    G +    I +    HL   G   V I   Q     
Sbjct: 138 -------------------------GKNVIYKIFEEAWNHLADQGTLWVVIRKQQGALSA 172

Query: 235 VVRIFESRKLFLV 247
           V +I E      +
Sbjct: 173 VTKIKEVFGNCDI 185


>gi|260787354|ref|XP_002588718.1| hypothetical protein BRAFLDRAFT_238289 [Branchiostoma floridae]
 gi|229273887|gb|EEN44729.1| hypothetical protein BRAFLDRAFT_238289 [Branchiostoma floridae]
          Length = 219

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 22/173 (12%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVG 126
             +EP  +T LL+D AL      +        L++G G+GAV     ++L   P +  + 
Sbjct: 20  HVYEPAEDTFLLMD-ALEKDADLLRSIAPSICLEVGCGSGAVITFLGSILGSRPHY--LC 76

Query: 127 VDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            D++ +A E A      N +S       L S     +E   DV++ NPPY+ +       
Sbjct: 77  TDLNPRAAECAARTGTQNNISVHPVLTDLVSALLPRLENKVDVMIFNPPYVVTP-----P 131

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------EIG 228
            EV       S  GG+ G          V R L+ +G+  +         EIG
Sbjct: 132 EEVGSHGIEASWAGGVKGREVMDRFFPLVPRLLSDNGVFYLVTIEQNDPEEIG 184


>gi|115522664|ref|YP_779575.1| methyltransferase small [Rhodopseudomonas palustris BisA53]
 gi|115516611|gb|ABJ04595.1| methyltransferase small [Rhodopseudomonas palustris BisA53]
          Length = 291

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 18/191 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V L +    F P       + S +     R +     R++++GTG+G + ++       
Sbjct: 82  DVELEVPPSVFHP----GHFITSKMFAGYLRRQDFAGKRVVEVGTGSGILAISAALAGA- 136

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
              + +DI+  A+  A+ NA  NGV  + +   SD FS++  +  FDV++S+PP      
Sbjct: 137 SHVLALDINPNAVRAARMNANFNGVGAQSEARVSDLFSALAADEKFDVVISSPPSFAGEP 196

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRI 238
            D             +   G  G      +      HLN  G   + +  +  +  +   
Sbjct: 197 ADLADR---------AWFAGP-GYRCLSGLFSAARAHLNDGGEMLLLLSSDTNIALLKTW 246

Query: 239 FESRKLFLVNA 249
                      
Sbjct: 247 ALEAGFAWQQV 257


>gi|304396475|ref|ZP_07378356.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
 gi|304355984|gb|EFM20350.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
          Length = 343

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +DS  A  L         ++LD+G G G +  +L   SP 
Sbjct: 166 GLTIHTLPGVFS-RDG----LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+E +K     NG+    +   S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLWLCDVHAAAIEASKLTLAANGIEG--EVFASNVFSDVTGRFDMIISNPPF------- 271

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                    +      G    L   + +  G  +HLN  G  
Sbjct: 272 --------HE------GTQTSLDAAQALIRGAVKHLNTGGEL 299


>gi|218131078|ref|ZP_03459882.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697]
 gi|317477035|ref|ZP_07936277.1| methyltransferase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986782|gb|EEC53115.1| hypothetical protein BACEGG_02682 [Bacteroides eggerthii DSM 20697]
 gi|316906828|gb|EFV28540.1| methyltransferase domain-containing protein [Bacteroides eggerthii
           1_2_48FAA]
          Length = 236

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 16/177 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               ++   ILD+G G+G + L L + +P+     ++I   A   AK N  ++  S+R +
Sbjct: 32  WAPVQNAKYILDVGAGSGLISLQLAQRNPWASITSIEIDPAAAAQAKENIQSSPWSDRME 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + SD+     E  FD+IVSNPPY ++++        +      ++          Y  +
Sbjct: 92  VICSDFRDYHAENKFDLIVSNPPYFVDALKCPDNQRCMARHTNELN----------YELL 141

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG--GND--RVLLF 262
               +  L++ G+ SV I    +  V+      +L+       +   G    RVLL 
Sbjct: 142 FGHSTHLLSEQGIISVIIPSEVEKTVIDTAWKYQLYPYRCLHVFTKPGKPYRRVLLA 198


>gi|74001362|ref|XP_544839.2| PREDICTED: similar to N6-DNA-methyltransferase isoform 1 [Canis
           familiaris]
          Length = 214

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 73/200 (36%), Gaps = 20/200 (10%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T L      A      E   V   L++G+G+G
Sbjct: 9   PLHGHVGRGPF--------SDVYEPAEDTFL---LLDALEAAAAELTGVEICLEVGSGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  DI+ +A       A  N VS +     L +     ++   D
Sbjct: 58  VVSAFLASMIGPQALYMCTDINPEAAACTLETAHCNNVSIQPVITDLVNGLLPRLKEKVD 117

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV       +  GG +G              L+  GL  + 
Sbjct: 118 LLVFNPPYVVTP-----PEEVGSHGVEAAWAGGRNGREVMDRFFPLAPDLLSPRGLFYLV 172

Query: 227 -IGYNQKVDVVRIFESRKLF 245
            I  N   ++++   +R L 
Sbjct: 173 TIKENNPEEILKTMTTRGLQ 192


>gi|329729449|gb|EGG65852.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU144]
          Length = 244

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 40/202 (19%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT  +  F  +   +   D  +   L          I D+G G G + LA+ K SP  
Sbjct: 69  LELTTDAGVFS-KDNVDFGSDLLIKTFLKEHPPGPSKTIADVGCGYGPIGLAIGKVSPHH 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +DI+ +AL +A+ N   N V +    ++SD  S+V    FD I++NPP        
Sbjct: 128 QITMLDINNRALALAEMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPPIRA----- 181

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      I +     L   G   V I   Q        + 
Sbjct: 182 --------------------GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 221

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       +S+  +++ + K
Sbjct: 222 ELFGNVEIIAKSKGYYILKSIK 243


>gi|242241873|ref|ZP_04796318.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144]
 gi|293367917|ref|ZP_06614555.1| methyltransferase domain protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|242234651|gb|EES36963.1| 16S rRNA methyltransferase [Staphylococcus epidermidis W23144]
 gi|291317946|gb|EFE58354.1| methyltransferase domain protein [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329737832|gb|EGG74064.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU045]
          Length = 244

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 40/202 (19%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT  +  F  +   +   D  +   L          I D+G G G + LA+ K SP  
Sbjct: 69  LELTTDAGVFS-KDNVDFGSDLLIKTFLKEHPPGPSKTIADVGCGYGPIGLAIGKVSPHH 127

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +DI+ +AL +A+ N   N V +    ++SD  S+V    FD I++NPP        
Sbjct: 128 QITMLDINNRALALAEMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPPIRA----- 181

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      I +     L   G   V I   Q        + 
Sbjct: 182 --------------------GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 221

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       +S+  +++ + K
Sbjct: 222 ELFGNVEIIAKSKGYYILKSIK 243


>gi|27467223|ref|NP_763860.1| hypothetical protein SE0305 [Staphylococcus epidermidis ATCC 12228]
 gi|57866133|ref|YP_187778.1| hypothetical protein SERP0182 [Staphylococcus epidermidis RP62A]
 gi|27314766|gb|AAO03902.1|AE016745_1 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636791|gb|AAW53579.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
          Length = 202

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 40/202 (19%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + LT  +  F  +   +   D  +   L          I D+G G G + LA+ K SP  
Sbjct: 27  LELTTDAGVFS-KDNVDFGSDLLIKTFLKEHPPGPSKTIADVGCGYGPIGLAIGKVSPHH 85

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
           +   +DI+ +AL +A+ N   N V +    ++SD  S+V    FD I++NPP        
Sbjct: 86  QITMLDINNRALALAEMNKTKNQV-DNVTIIESDCLSAVNHQCFDYILTNPPIRA----- 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      I +     L   G   V I   Q        + 
Sbjct: 140 --------------------GKDIVHRIFEQAFDRLKTTGELYVVIQKKQGMPSAKKKIE 179

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       +S+  +++ + K
Sbjct: 180 ELFGNVEIIAKSKGYYILKSIK 201


>gi|33595778|ref|NP_883421.1| hypothetical protein BPP1102 [Bordetella parapertussis 12822]
 gi|33565857|emb|CAE36403.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 372

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/223 (22%), Positives = 75/223 (33%), Gaps = 36/223 (16%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
           ++  R+   L  A     K   I   LG R                 P     VD     
Sbjct: 140 LVSLRELLGLIGAAQWQQKGVPIAA-LGAR--------THPRYGVFSPVRGEYVDLVANT 190

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            LP           D+GTGTG +   L +          D+  +AL  A  N    G+  
Sbjct: 191 PLP-----GGATAFDIGTGTGVLAAVLARR--GLDVTATDLDPRALACAADNLQRLGLGG 243

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           R   LQ+D F    G  D++V NPP++ +     +   + D D R+ L G          
Sbjct: 244 RVRLLQADLFPP--GRADLVVCNPPWLPARPSAPVEYAIYDPDSRM-LTG---------- 290

Query: 209 IADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKL 244
              G++ HLN    G   +    E  G   +  ++   E   L
Sbjct: 291 FLAGLAAHLNPGGEGWLILSDLAEHLGLRSRDWLLAQVEQAGL 333


>gi|311744554|ref|ZP_07718354.1| methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311312173|gb|EFQ82090.1| methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 488

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 20/181 (11%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W    ++   L +       E  L +  A +       +  V R LDLGTG G   L L 
Sbjct: 113 WWVVCDLTPGLDAGPVRVGAEHVLGISEASSSLAHLTVRTPVARALDLGTGCGVQALHLA 172

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPY- 174
           + +   + V  D++ +AL +A+  A  NGV+   D  +   F  V    FD++ +NPP+ 
Sbjct: 173 QHAD--RVVATDVNPRALAMAELTASLNGVT--VDVRRGSLFEPVATERFDLVATNPPFV 228

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
           +     D L      F+          G    R I  G   HL + G C V        +
Sbjct: 229 VSPPDGDRLVYRETGFE----------GDEVVRRIVQGAPDHLTEHGWCQVLASWIHPAD 278

Query: 231 Q 231
           Q
Sbjct: 279 Q 279


>gi|150008489|ref|YP_001303232.1| hypothetical protein BDI_1875 [Parabacteroides distasonis ATCC
           8503]
 gi|149936913|gb|ABR43610.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 319

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 13/156 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R  
Sbjct: 114 WASTERCQRILDVGTGTGLIALMLAQRS-TAILDAIDIDSDACLQAQENIAKSPFANRIQ 172

Query: 152 TLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q+     +      +D+IVSNPPY     +D L    +  D + +L    D LS    
Sbjct: 173 VYQTSLSEYMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD- 223

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +     + L  +G  ++ + + Q+  ++ I     L
Sbjct: 224 LLRDSRKLLAPEGNIALVLPFEQRESLIDIAREESL 259


>gi|262395213|ref|YP_003287067.1| putative O-methyltransferase [Vibrio sp. Ex25]
 gi|262338807|gb|ACY52602.1| predicted O-methyltransferase [Vibrio sp. Ex25]
          Length = 215

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 10/165 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                I+  +  +ILD+GTGTG + L   +     +   VDI   A+E A+ N V +  S
Sbjct: 9   MLGAWIQSPNNAQILDIGTGTGLLALMCAQRFTEAQITAVDIELTAIEAAQKNVVQSPWS 68

Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R     SD         F  I+ NPPY  S                 +     D L H 
Sbjct: 69  ARVCVHHSDILDFTPTHPFQRIICNPPYFNSGEQSKHSQ--------RATARHTDTLRH- 119

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +     + L++ G  +  +   +    + +   +   L    +
Sbjct: 120 NALLQRCYQLLDEQGKANFVLPITEGERFIELALHQGWHLSRVCR 164


>gi|226941784|ref|YP_002796858.1| Methyltransferase small [Laribacter hongkongensis HLHK9]
 gi|226716711|gb|ACO75849.1| Methyltransferase small [Laribacter hongkongensis HLHK9]
          Length = 394

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 83/225 (36%), Gaps = 36/225 (16%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   + +A     K   +  + G        +      F P R E   LV +A 
Sbjct: 155 SVVALRELLAVISAHEWRKKGVPVAAVHG-------SIHPHYGVFSPVRGEYVGLVANA- 206

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                           D+GTG+G +  A+L      + +  D   +AL  A  N V  G+
Sbjct: 207 ------PLPPQAELAFDIGTGSGVLA-AVLARRGVARVIATDQDPRALACAADNLVRLGL 259

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +E+ +  Q+D F +  G   ++V NPP++ +       +E   +DP  +           
Sbjct: 260 AEQVEVRQADLFPA--GRAGLVVCNPPWLPAQ--PTSPIEYAVYDPDSA---------ML 306

Query: 207 RTIADGVSRHLNK--DGLCSV----EI-GYNQKVDVVRIFESRKL 244
           R    G++ HL    +G   +    E  G   +  ++       L
Sbjct: 307 RGFLAGLAGHLTPEGEGWLILSDLAEHLGLRSREQLLDWIAGAGL 351


>gi|261340876|ref|ZP_05968734.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC
           35316]
 gi|288317307|gb|EFC56245.1| SAM-dependent methyltransferase [Enterobacter cancerogenus ATCC
           35316]
          Length = 245

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +  RILD+GTG+G + L L + +        V++  +A   A  NA  +  +ER 
Sbjct: 39  WAPVAEATRILDIGTGSGLLALMLAQRTKNHVTIDAVELDAQAAGQASENAAESPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W       +D+IVSNPPY    V       E   +           G   +
Sbjct: 99  NVKCADVLAWAPEQTARYDLIVSNPPYFEPGVECGTPEREQARY----------TGSLDH 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           + +    +  + ++G   V +  +     + I +     L     D    +     RVLL
Sbjct: 149 KALLTSAAELIAEEGFFCVVLPESTGNTFIEIAQQIGWKL-RLRTDISDTEGRLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|9280295|dbj|BAB01750.1| N6-DNA-methyltransferase-like protein [Arabidopsis thaliana]
          Length = 246

 Score = 90.2 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 32/209 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ LA     IE    +  +++G G+G    ++ L L  E P   
Sbjct: 14  HREVYEPCDDSFALVDALLADRTNLIEHNPKI-CMEIGCGSGYVITSLILLLQNEVPGVH 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVI 179
            + +D +  A  + K     +GV    D + +D  + +E    G  DVIV NPPY+ +  
Sbjct: 73  YLAIDTNPIATRVTKETLEAHGV--NADVICADLATGLEKRLAGSVDVIVVNPPYVPTPE 130

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---------EI--- 227
            +     +       +  GG +G +    I   V   L++ G   +         EI   
Sbjct: 131 YEVGMEGI-----ASAWAGGENGRTVIDKILPVVDLLLSEKGWFYLVTLTSNFPAEICLM 185

Query: 228 ----GYNQKVDVVRIFESRKLFLVNAFKD 252
               GY  ++ V R  E   L ++  ++D
Sbjct: 186 MRKKGYASRIVVQRSTEEENLVILKFWRD 214


>gi|320100238|ref|YP_004175830.1| methyltransferase small [Desulfurococcus mucosus DSM 2162]
 gi|319752590|gb|ADV64348.1| methyltransferase small [Desulfurococcus mucosus DSM 2162]
          Length = 217

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 69/189 (36%), Gaps = 19/189 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L    D + P  +T       LA  L    K      +DLG G+G + L  L +    
Sbjct: 1   MKLVFVGDVYRPSDDT------WLALKLLDSLKPKAGLCVDLGCGSGILGLYGLIKGYCE 54

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V VDI   AL     N   N    R   + SD  + + G  D++++NPPY+ +     
Sbjct: 55  RTVFVDIDEDALATTLRNIPLNNAQARSIVVSSDN-AVLHGAADLVLANPPYLPAAEGKV 113

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFE 240
           L           + +GG+ G        +     L   GL  +      NQ V V     
Sbjct: 114 LDA---------ATEGGVHGYEAVLHFINVAHEVLRPGGLLILVYSSLSNQLV-VEEHLS 163

Query: 241 SRKLFLVNA 249
            +   +V  
Sbjct: 164 RKGFTMVAF 172


>gi|309800086|ref|ZP_07694280.1| methyltransferase small domain superfamily [Streptococcus infantis
           SK1302]
 gi|308116288|gb|EFO53770.1| methyltransferase small domain superfamily [Streptococcus infantis
           SK1302]
          Length = 196

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 81/210 (38%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ ++D      L  ++     +ILD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKMIDFGSQLLLRCLDVEKGEKILDVGCGYGPIGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NAV N V  +    QS+ +  VEG F+ ++SNPP
Sbjct: 74  SLVKAY-GAQATMVDINNRALDLAQQNAVKNKV--QATIFQSNIYEQVEGQFNHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSIDFLVDGGDLTIVIQKKQGA 165

Query: 234 -----DVVRIF-------ESRKLFLVNAFK 251
                 +  +F       + +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEVVKKDKGYYILRSVK 195


>gi|312142729|ref|YP_003994175.1| methyltransferase small [Halanaerobium sp. 'sapolanicus']
 gi|311903380|gb|ADQ13821.1| methyltransferase small [Halanaerobium sp. 'sapolanicus']
          Length = 241

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 34/217 (15%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            E IH ++       + +   +  F+   ++ LL +          + R    ++DLGTG
Sbjct: 1   MEEIHYLIEE----ELEIIQDNRFFKFGTDSVLLANFV--------KLRRGDNVIDLGTG 48

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----G 163
           +G + L L  ++   K  GV+I     ++A+ N   N + ++   +  D     +    G
Sbjct: 49  SGVIPLLLAYKNQGVKVSGVEIQKPLADLAQRNVELNQMDDKIKIINQDLCPLKQEMEAG 108

Query: 164 LFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            FDV+VSNPPY+      I     L     +            +    +    +  L   
Sbjct: 109 SFDVVVSNPPYLPVDAGKIKANKYLAAARHEIH----------AELEDVIAAAAHLLKFG 158

Query: 221 GLCSVEIGYNQKVDVVRIF-----ESRKLFLVNAFKD 252
           GL  +     +  +V+ +      +++KL  V A +D
Sbjct: 159 GLFYLVYRVERLTEVIELLAKYNCQAKKLRFVQARQD 195


>gi|309803516|ref|ZP_07697609.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
 gi|309808222|ref|ZP_07702131.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           01V1-a]
 gi|308164400|gb|EFO66654.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308168510|gb|EFO70619.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           01V1-a]
          Length = 204

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 35/184 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDDQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFES 241
             E 
Sbjct: 179 CLEQ 182


>gi|302036312|ref|YP_003796634.1| hypothetical protein NIDE0946 [Candidatus Nitrospira defluvii]
 gi|300604376|emb|CBK40708.1| conserved protein of unknown function, putative SAM-dependent
           methyltransferase [Candidatus Nitrospira defluvii]
          Length = 373

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 30/191 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A             V   D+GTGTG +  A+L    
Sbjct: 166 GDRIHPHYGVFSPIRSEYVDLVADA--------PLPSSVLAFDIGTGTGVLA-AVLARRG 216

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D   +AL  A+ N     + +R + +Q+D F   EG   +++ NPP++ +   
Sbjct: 217 VSHIVATDQDPRALACARENLARLELIDRVEVVQADLFP--EGKAPLVLCNPPWVPARPT 274

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EIGY-NQKV 233
             +   + D + R+ L G ++GL          + HL     G   +    E      + 
Sbjct: 275 SPIEQAIYDPECRM-LTGFLNGL----------AAHLEPGGEGWLLLSDLAEHLELRTRA 323

Query: 234 DVVRIFESRKL 244
           +++ +F+   L
Sbjct: 324 ELLAMFDQAGL 334


>gi|325973694|ref|YP_004250758.1| hypothetical protein MSU_0868 [Mycoplasma suis str. Illinois]
 gi|323652296|gb|ADX98378.1| conserved hypothetical protein [Mycoplasma suis str. Illinois]
          Length = 276

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 17/236 (7%)

Query: 37  FLTNAIVRSLKH--ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE 94
            L+  +   +++    + R+     F   +  L    F PR E+ELLV   L   +  + 
Sbjct: 49  KLSEKLCSRIQNLDYPLTRLTNRVFFNQKKWFLFQGVFSPRIESELLV-RILKDWVKELN 107

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                 I DL +G+G + L++L+E   +  +GV +D S +A +    N+  +  + + + 
Sbjct: 108 LYSFSYI-DLCSGSGVIFLSVLEELNSYIKRGVAIDSSFRACKNISKNSELSKDNSKIEI 166

Query: 153 LQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             +DW   +     +DVI  NPPY+    +     E    DP+ +L G + G SHY+ + 
Sbjct: 167 YLTDWVKYLTKNSEWDVITINPPYLSEKELKE-SKEFCLGDPKWALQGALQGWSHYQKML 225

Query: 211 DGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           +    + +   L   E    + Q  D         LF +  ++DY    R +   R
Sbjct: 226 EFAKTN-SYWKLIIFECSEFHEQLWD-----RDNSLFTIRKYRDYLDKFRAIALIR 275


>gi|255068177|ref|ZP_05320032.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
 gi|255047604|gb|EET43068.1| ribosomal protein L11 methyltransferase [Neisseria sicca ATCC
           29256]
          Length = 372

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 22/165 (13%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++ +    F P R E   L+  A            +    D+GTG+G +  A+L +    
Sbjct: 165 KIHVPFGVFSPLRGEYLDLIAQA-------PLNPHIQTAFDIGTGSGVIA-AILAKRGIS 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +  D + KA+  A +N    G+ ++      D F   EG  D+IV NPP++ +     
Sbjct: 217 EIIATDTNPKAIACATANLARLGLDKQVVVQAVDLFP--EGRADLIVCNPPWLPAKPTSA 274

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +  E   +DP  +               +GV +HLN  G   + I
Sbjct: 275 V--EAALYDPDNA---------MLTAFLNGVQQHLNPQGEAWLII 308


>gi|146299059|ref|YP_001193650.1| methyltransferase small [Flavobacterium johnsoniae UW101]
 gi|262828313|sp|A5FKD7|TRMN6_FLAJ1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|146153477|gb|ABQ04331.1| methyltransferase small [Flavobacterium johnsoniae UW101]
          Length = 235

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 12/157 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   ILD+G GTG + L L + +   +   ++I   A E A  N   +   +R     +
Sbjct: 33  HNPFSILDIGAGTGIIALMLAQRTHAEQIDALEIDEDAYEQAVENFEASPWGDRLFCFHA 92

Query: 156 DWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                +E     +D+IVSNPP+           E RD      L    D +     I + 
Sbjct: 93  GLDEFIEEPEDEYDLIVSNPPFYAEDYKTN--DEQRD------LARFQDAMPF-EEIVEA 143

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
               L+++G+ +V I + ++     + +  +L+ +  
Sbjct: 144 ADLLLSENGILAVIIPFKEEAKFTALAKDFELYPIKI 180


>gi|326385164|ref|ZP_08206832.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
 gi|326196129|gb|EGD53335.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
          Length = 234

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 14/158 (8%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               + P+ +T +L+DS LA  L         R+LDL TG+GAV LA  +         V
Sbjct: 17  DRQVYRPQTDTRMLIDSLLALDLS------GRRMLDLCTGSGAVALAGARA--GADITAV 68

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D    A+   +  AV  G       + SD     +  FD++  NPPY+ + I     ++ 
Sbjct: 69  DSCPHAVASVRRAAVDAGFD--VHAVLSDLADVTDSGFDIVTCNPPYVLTPIGTESSID- 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               PR + + G DG +    +   +   L  DG+  +
Sbjct: 126 ---GPRHAWNAGPDGRAVLDPLCSALPGLLAADGIALL 160


>gi|296130592|ref|YP_003637842.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
 gi|296022407|gb|ADG75643.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
          Length = 515

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 17/186 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L V  A         +    R+LDLGTG G   L   + +     V  D+S +AL
Sbjct: 146 RTDHVLGVGGASLTLAQATVRDPRERVLDLGTGCGVQALHASRHA--AHVVATDLSPRAL 203

Query: 135 EIAKSNAVTNGV-SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
             A+      G+  +R    +      V G  FD++VSNPP++    +   G +V  +D 
Sbjct: 204 AFARFTTALAGLGPDRVSLREGSMLEPVAGETFDLVVSNPPFV----ITPRGADVPAYDY 259

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EI--GYNQKVDVVRIFESRKLFL 246
           R   DGG  G    R +  GV   L   G+  +    E+  G      +    ++  L  
Sbjct: 260 R---DGGRSGDDLVRDLVTGVGDVLAPGGVAQLLANWEVRDGEEWHERIGAWVDASGLDA 316

Query: 247 VNAFKD 252
               +D
Sbjct: 317 WVVLRD 322


>gi|84495067|ref|ZP_00994186.1| putative transferase [Janibacter sp. HTCC2649]
 gi|84384560|gb|EAQ00440.1| putative transferase [Janibacter sp. HTCC2649]
          Length = 495

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 12/152 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L +  A         +R V   LD+GTG G   L L   +     V  D+S +AL
Sbjct: 132 RNDHVLGIGGASTTLAAWTIRRPVGAALDVGTGCGVQALHLGAHTD--SIVATDLSERAL 189

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             A+ NA  N V   +D         V G  FD+IVSNPP++    +     EV  F+ R
Sbjct: 190 AFARFNANLNEVE--WDVRAGSMLDPVAGQRFDLIVSNPPFV----ITPRSGEVPLFEYR 243

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              DGG  G +    +   V  HL   G+   
Sbjct: 244 ---DGGASGDAIVANLVRSVGEHLEPGGVAQF 272


>gi|146302843|ref|YP_001190159.1| methyltransferase small [Metallosphaera sedula DSM 5348]
 gi|145701093|gb|ABP94235.1| 16S rRNA m(2)G 1207 methyltransferase [Metallosphaera sedula DSM
           5348]
          Length = 186

 Score = 89.8 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 27/169 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   +   + D+G G G + + +   +P      +D++  A++ ++ N  
Sbjct: 32  DLGTRVLLENLIIPEEGAVADVGCGYGPIGIYVAIINPRLSVYMLDVNPLAVKASRENVE 91

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+ +R   L+SD  S  E     I SNPP                            G
Sbjct: 92  RYGLGDRVKVLKSDLLSGFEFRVKAIYSNPPL-------------------------SKG 126

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +     +A      L K G   + +   +   V  IF       V   K
Sbjct: 127 VDVLERLARDAPERLEKGGWVQMVLYKGEGNAVK-IFSEY-FPEVKVMK 173


>gi|322392143|ref|ZP_08065605.1| methyltransferase domain protein [Streptococcus peroris ATCC
           700780]
 gi|321145043|gb|EFX40442.1| methyltransferase domain protein [Streptococcus peroris ATCC
           700780]
          Length = 196

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 91/247 (36%), Gaps = 64/247 (25%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +S      +PD+V D  +                   +LG +    +     +  F    
Sbjct: 1   MSKMYYAENPDAVHDVHELRVE---------------LLGQK----MTFLTDAGVF---- 37

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            ++ ++D      L  ++     +ILD+G G G + L+L+K     +   VDI+ +AL++
Sbjct: 38  -SKKMIDFGSQLLLRCLDIDKGEKILDVGCGYGPIGLSLVKAY-GVQATMVDINNRALDL 95

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ NAV N V  +    QS+ +  VEG FD ++SNPP                       
Sbjct: 96  AQQNAVKNNV--QATIFQSNIYDQVEGQFDHVISNPPIRA-------------------- 133

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKL 244
                G      I +    +L   G  ++ I   Q        +  +F       + +  
Sbjct: 134 -----GKQVVHEIIEKSIIYLVYGGDLTIVIQKKQGAPSAKNKMEEVFGNCEVVKKDKGY 188

Query: 245 FLVNAFK 251
           +++ + K
Sbjct: 189 YILRSVK 195


>gi|332157868|ref|YP_004423147.1| hypothetical protein PNA2_0225 [Pyrococcus sp. NA2]
 gi|331033331|gb|AEC51143.1| hypothetical protein PNA2_0225 [Pyrococcus sp. NA2]
          Length = 195

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 73/206 (35%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL+++ +         +   R+LDLG G G + + +  
Sbjct: 25  YCFKFITASGVFSFGKLDRGTELLIENMVL--------KPNWRVLDLGCGYGPIGI-VAS 75

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  +  DI+ +A+ IAK N   N V+   +    + +  VEG  FD I++NPP   
Sbjct: 76  RFVDY-VIMTDINRRAVAIAKKNLKLNNVT-NAEVRSGNLYEPVEGEKFDSIITNPPVHA 133

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-V 235
                                    G    R I      +L+  G+  + I        +
Sbjct: 134 -------------------------GKDILREIVINAPNYLHDGGMLQLVIKTKLGAKFI 168

Query: 236 VRIFESRKLFLVNA-----FKDYGGN 256
             I +     +V       ++ Y G 
Sbjct: 169 KEIMKDTFTEVVELSKGSGYRVYAGI 194


>gi|328948386|ref|YP_004365723.1| methyltransferase type 11 [Treponema succinifaciens DSM 2489]
 gi|328448710|gb|AEB14426.1| Methyltransferase type 11 [Treponema succinifaciens DSM 2489]
          Length = 244

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 68/189 (35%), Gaps = 25/189 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL      F    +  LL D A          +   +  DLGTGTG + L + +++P  
Sbjct: 17  LRLIQGKKEFRFGIDAVLLSDFA--------RTKGKCKACDLGTGTGIIPLLMSEKNPEA 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE-- 176
               ++I  ++ ++A+ N   N + E+     +D         +  FD +VSNPPYIE  
Sbjct: 69  NFECIEIQEESADMARRNVELNNLQEKIKIFCADIKEPFKVLQKNSFDAVVSNPPYIEIS 128

Query: 177 -SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                    L V   +   +L            +       L   G   +     +   +
Sbjct: 129 NGNTNKTKPLSVARHEVFCTL----------EDVIKTAYALLKSHGKFFMIHKPFRLPQI 178

Query: 236 VRIFESRKL 244
             + E  KL
Sbjct: 179 FSLLEKYKL 187


>gi|309806665|ref|ZP_07700661.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
 gi|308166970|gb|EFO69153.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
          Length = 204

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 35/184 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFES 241
             E 
Sbjct: 179 CLEQ 182


>gi|325912951|ref|ZP_08175325.1| methyltransferase small domain protein [Lactobacillus iners UPII
           60-B]
 gi|325477765|gb|EGC80903.1| methyltransferase small domain protein [Lactobacillus iners UPII
           60-B]
          Length = 204

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      +  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLIKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   +D++ +AL +AK NA  N + +  +   SD + +++    F +I++NPP     
Sbjct: 85  KSRVTMIDVNERALALAKRNAQLNEI-DNVNIFSSDCYRNLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|257866490|ref|ZP_05646143.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257872995|ref|ZP_05652648.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257800448|gb|EEV29476.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257807159|gb|EEV35981.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
          Length = 203

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 12/139 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++    +   F P+      +D      L      D  RILDLG G G V + L K  P 
Sbjct: 10  SLEFETNESVFSPKG-----LDVGTKAMLKAAVINDQDRILDLGCGYGFVGIYLAKRYPE 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE--SVI 179
                 DIS  A+++   NA  N V+     L   +    +  FDVI+SNPPY    SV 
Sbjct: 65  AAVTMTDISANAIDLTTKNAQRNDVAPEI-VLSEGFKEISDKTFDVILSNPPYHVDFSVP 123

Query: 180 VDCLGLEVRDFDPRISLDG 198
            + +    R    +++L+G
Sbjct: 124 KEFIEKAYR----QLALNG 138


>gi|308185569|ref|YP_003929700.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
 gi|308056079|gb|ADO08251.1| ribosomal RNA small subunit methyltransferase [Pantoea vagans C9-1]
          Length = 379

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 61/162 (37%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +DS  A  L         ++LD+G G G +  +L   SP 
Sbjct: 202 GLTIHTLPGVFS-RDG----LDSGSALLLSTFTPHTKGKVLDMGCGAGVIAASLPARSPK 256

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+E +K     NG+    +   S+ FS V G FD+I+SNPP+       
Sbjct: 257 VRLWLCDVHAAAIEASKLTLAANGIEG--EVFASNVFSDVTGRFDMIISNPPF------- 307

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                    +      G    L   + +  G  +HLN  G  
Sbjct: 308 --------HE------GTQTSLDAAQALIRGAVKHLNTGGEL 335


>gi|159905717|ref|YP_001549379.1| hypothetical protein MmarC6_1334 [Methanococcus maripaludis C6]
 gi|159887210|gb|ABX02147.1| protein of unknown function DUF890 [Methanococcus maripaludis C6]
          Length = 293

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 21/179 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R  + + +    D   P P     ++  L       EK ++  +L++GTG+G + + + K
Sbjct: 52  RHVFGLDMDFHEDALIPTP-----INRYLFIKNIFDEKDNIKEVLEIGTGSGIISILIAK 106

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSN 171
                     D     L+IA+ N   N +  +   + S      D        FD+I+S 
Sbjct: 107 YF-ECNVTATDTVSDYLKIAEENISKNNLDSKITLVNSKGKIIFDIPKLKNKKFDLIISY 165

Query: 172 PPYIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PPY     V       R F    +     + GG  G    + I +    +LN  G+ ++
Sbjct: 166 PPYYADNSVASK----RSFGGAFASEVELIGGGSYGEVFSQKIIEEGMDYLNNGGIIAI 220


>gi|302544276|ref|ZP_07296618.1| putative transferase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461894|gb|EFL24987.1| putative transferase [Streptomyces himastatinicus ATCC 53653]
          Length = 483

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 11/158 (6%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L V  A         +  V R LDLGTG+G   L   + +   +    D + +AL
Sbjct: 113 RSQLVLGVGGASTTLAGLTVRTPVKRALDLGTGSGIQALHASRHA--ARVTATDPNPRAL 170

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           ++A+     +G  E  D  +   F  V G  +D+IVSNPP++ S         V      
Sbjct: 171 DMARLTLALSGAPEP-DLREGSLFEPVGGETYDLIVSNPPFVISPRSAEGDRLVYR---- 225

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              DGG+ G    RT+    + HL   G C +   +  
Sbjct: 226 ---DGGMSGDDLCRTLVQQSAAHLADGGWCQLLANWQH 260


>gi|289565392|ref|ZP_06445842.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|294615414|ref|ZP_06695287.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1636]
 gi|289162882|gb|EFD10732.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291591788|gb|EFF23424.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1636]
          Length = 210

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/249 (20%), Positives = 84/249 (33%), Gaps = 61/249 (24%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            +++H     PD+  D  Q  F        LK ++   +     F    +   S      
Sbjct: 9   DMTNHYYSERPDTAHDFEQWAFE-------LKGKTFQFVTDSGVFSRETVDYGSRVLI-- 59

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
                        +    E  D  +ILD+G G G + LAL   +  F    VDI+ +A+ 
Sbjct: 60  ------------DAFDWEELPDEGKILDVGCGYGPIGLALAFATQRF-VEMVDINERAVS 106

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A+ NA  N + E  D  QS+ + +V E  +  IVSNPP                     
Sbjct: 107 LAQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA------------------ 147

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESR 242
                  G      I  G    L K G  ++ I   Q        +   F       + +
Sbjct: 148 -------GKKVVHKILTGAYHRLKKGGTLTIVIQKKQGAPSAQKKMEETFGNAEIVTKDK 200

Query: 243 KLFLVNAFK 251
             +++ + K
Sbjct: 201 GYYIIKSVK 209


>gi|167564271|ref|ZP_02357187.1| hypothetical protein BoklE_17069 [Burkholderia oklahomensis EO147]
          Length = 378

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 34/210 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
             K   I  + G R        +        P     VD     SLP           D+
Sbjct: 159 RKKGVPIAALGGKR--------IHPHYGVFSPVRGEYVDLVARASLPSTS-----LAFDI 205

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G GTG + + L       + V  D   +AL  A  N    G + + + +++D F   +G 
Sbjct: 206 GVGTGVLAVVLASRGVE-RVVATDQDPRALACAAENVARLGYASQVEIVEADLFP--DGR 262

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GL 222
             ++V NPP++ +       LE   +DP              +    G++ HL     G 
Sbjct: 263 APLVVCNPPWVPAR--PSSPLEYAIYDPDS---------RMLKGFLAGLAAHLAPGGEGW 311

Query: 223 CSV----EI-GYNQKVDVVRIFESRKLFLV 247
             +    E  G   + +++   ++  L +V
Sbjct: 312 LILSDFAEHLGLRTRDELLGWIDAAGLAVV 341


>gi|319654859|ref|ZP_08008934.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2]
 gi|317393422|gb|EFV74185.1| hypothetical protein HMPREF1013_05556 [Bacillus sp. 2_A_57_CT2]
          Length = 200

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 69/208 (33%), Gaps = 49/208 (23%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  R    +  F        + LL+++         E      ILD+G G G + L   K
Sbjct: 26  YPFRFKTDNGVFSKGEVDFGSRLLIETF-------EEPEAEGNILDVGCGYGPIGLTAAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P      VD++ +AL +AK NA  NG+       +SD   + +G  F  I++NPP   
Sbjct: 79  LMPERTVHMVDVNERALGLAKENAELNGIK-NVQIYESDRLENTKGNKFAAILTNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--- 233
                                    G      I +     L   G   V I   Q     
Sbjct: 138 -------------------------GKKVVHDIFEQSFHSLISGGELWVVIQKKQGAPSA 172

Query: 234 --DVVRIF-------ESRKLFLVNAFKD 252
              +  +F       + +  F++ A KD
Sbjct: 173 IDKLTELFGEVETAEKKKGYFILRAKKD 200


>gi|26989970|ref|NP_745395.1| HemK family modification methylase [Pseudomonas putida KT2440]
 gi|24984888|gb|AAN68859.1|AE016518_5 modification methylase, HemK family [Pseudomonas putida KT2440]
          Length = 316

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 13/145 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L     R V   +D+G G+G   L + + +   +   VDI+  AL     NA  
Sbjct: 124 QVIHEHLQHCPAR-VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAAL 182

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            GVS       SD    + G FD+IV+NPPY+       L    R +       GG  G+
Sbjct: 183 AGVS-NLSVEPSDLLDGISGTFDLIVANPPYM-------LDPNARIYR----HGGGALGV 230

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
                I +     L++ G   +  G
Sbjct: 231 DLSLRIVEQARDRLSRHGTLLLYTG 255


>gi|298368399|ref|ZP_06979717.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282402|gb|EFI23889.1| methyltransferase domain protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 335

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 22/167 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++ +    F P R E   L+  A            +    D+GTG+G +  A+L +  
Sbjct: 126 GGKIHVPFGVFSPLRGEYLDLIAQA-------PLNPHIQTAFDIGTGSGVIA-AILAKRG 177

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   +D + KA+  A +N    G+ ++      D F   EG  D+IV NPP++ +   
Sbjct: 178 IPEITAIDTNPKAIACATANLARLGLDKQVAVQAVDLFP--EGRADLIVCNPPWLPAKPT 235

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +  E   +DP  +               +GV +HLN  G   + I
Sbjct: 236 SAV--ETALYDPDNA---------MLTAFLNGVRQHLNPQGEAWLII 271


>gi|261206971|ref|ZP_05921660.1| methyltransferase [Enterococcus faecium TC 6]
 gi|260078599|gb|EEW66301.1| methyltransferase [Enterococcus faecium TC 6]
          Length = 201

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 84/248 (33%), Gaps = 61/248 (24%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           +++H     PD+  D  Q  F        LK ++   +     F    +   S       
Sbjct: 1   MTNHYYSERPDTAHDFEQWAFE-------LKGKTFQFVTDSGVFSRETVDYGSRVLI--- 50

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
                       +    E  D  +ILD+G G G + LAL   +  F    VDI+ +A+ +
Sbjct: 51  -----------DAFDWEELPDEGKILDVGCGYGPIGLALAFATQRF-VEMVDINERAVSL 98

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A+ NA  N + E  D  QS+ + +V E  +  IVSNPP                      
Sbjct: 99  AQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA------------------- 138

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRK 243
                 G      I  G    L K G  ++ I   Q        +   F       + + 
Sbjct: 139 ------GKKVVHKILTGAYHRLKKGGTLTIVIQKKQGAPSAQKKMEETFGNAEIVTKDKG 192

Query: 244 LFLVNAFK 251
            +++ + K
Sbjct: 193 YYIIKSVK 200


>gi|258620331|ref|ZP_05715369.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587210|gb|EEW11921.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 239

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 10/149 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+G GTG + L   +     +   +DI   A    + N+  +  + R   LQ+D
Sbjct: 42  PPTSILDIGCGTGLLSLMCAQRFQSAQITALDIEPSAYLATEKNSDNSPWANRIQCLQTD 101

Query: 157 W-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +      F  I+ NPPY  S          R             G   ++ + + + +
Sbjct: 102 IRYWHPPQCFSAIICNPPYFNSGETA--QQFARA-------TARHTGSLKHQELIECLPQ 152

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            L  DG+ S  +   +    + + +   L
Sbjct: 153 LLEPDGVASFILPKTEGDQFIALAQQAGL 181


>gi|242398329|ref|YP_002993753.1| Ribosomal RNA small subunit methyltransferase C [Thermococcus
           sibiricus MM 739]
 gi|242264722|gb|ACS89404.1| Ribosomal RNA small subunit methyltransferase C [Thermococcus
           sibiricus MM 739]
          Length = 195

 Score = 89.8 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 72/213 (33%), Gaps = 50/213 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I G R     R   SS  F        T+LL+++ +          +  ++LDLG G GA
Sbjct: 22  IRGER----FRFITSSGVFSFGKLDRGTKLLIENMVL--------EENWQVLDLGCGYGA 69

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + + +      +  V  DI+ +A+ IAK N   N V    +      +  V+G  F  I+
Sbjct: 70  IGI-VASRFVDY-AVMTDINKRAVSIAKKNLKINNVM-NAEVRWGHLYEPVKGERFHSII 126

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +NPP                            G    R I      HL   GL  + I  
Sbjct: 127 TNPPVHA-------------------------GKDILREIVINAPYHLYDGGLLQIVIRT 161

Query: 230 NQKVDVVRIFESRKLFLVNA------FKDYGGN 256
           NQ    ++         V        F+ Y G 
Sbjct: 162 NQGAKYIKGLMEENFNEVKEIARGSGFRVYAGI 194


>gi|308171997|ref|YP_003918702.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|307604861|emb|CBI41232.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|328551807|gb|AEB22299.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens TA208]
 gi|328910068|gb|AEB61664.1| ribosomal RNA methyltransferase [Bacillus amyloliquefaciens LL3]
          Length = 201

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119
            +   T  S  F  +      VD      +   E+ ++    LD G G G + L+L  E 
Sbjct: 26  RSYTFTSDSGVFSKKE-----VDFGSRVLIEAFEEPEIDGDFLDAGCGYGPIGLSLAGEF 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
                  +D++ +A+E++  NA  NG+       QSD FS+++    F  I++NPP    
Sbjct: 81  TDRTVHMIDVNERAVELSNENAEKNGIK-NVRIYQSDLFSNIDSAQTFASIITNPPIRA- 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK----- 232
                                   G      I +  + HL   G   + I   Q      
Sbjct: 139 ------------------------GKKVVHAIFEKSAEHLRASGELWIVIQKKQGGPSAV 174

Query: 233 VDVVRIF-------ESRKLFLVNAFK 251
             +  +F       + +  +++ A K
Sbjct: 175 EKLKELFDEVSVVQKKKGYYIIKAKK 200


>gi|154684624|ref|YP_001419785.1| YbxB [Bacillus amyloliquefaciens FZB42]
 gi|154350475|gb|ABS72554.1| YbxB [Bacillus amyloliquefaciens FZB42]
          Length = 201

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKES 119
            +   T  S  F  +      VD      +   E+ ++    LD G G G + L+L  E 
Sbjct: 26  RSYTFTSDSGVFSKKE-----VDFGSRVLIEAFEEPEIDGDFLDAGCGYGPIGLSLAGEF 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
                  +D++ +A+E++  NA  NG+       QSD FS+++    F  I++NPP    
Sbjct: 81  TDRTVHMIDVNERAVELSNENAEKNGIK-NVRIYQSDLFSNIDSAQTFASIITNPPIRA- 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK----- 232
                                   G      I +  + HL   G   + I   Q      
Sbjct: 139 ------------------------GKKVVHAIFEKSAEHLRASGELWIVIQKKQGGPSAI 174

Query: 233 VDVVRIF-------ESRKLFLVNAFK 251
             +  +F       + +  +++ A K
Sbjct: 175 EKLKELFDEVSVVQKKKGYYIIKAKK 200


>gi|297618925|ref|YP_003707030.1| methyltransferase small [Methanococcus voltae A3]
 gi|297377902|gb|ADI36057.1| methyltransferase small [Methanococcus voltae A3]
          Length = 214

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 61/192 (31%), Gaps = 35/192 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F P       VD      +   E +    ILD+G G GA+ ++L  +    
Sbjct: 26  LLFNTDAGIFSPNY-----VDKGSQILVHYSEFKKEDDILDMGCGYGAIGISLADDVN-- 78

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVI 179
             +  DI+ +++ +AK N   N V        Q + +  V  +  FD I+SNPP      
Sbjct: 79  SVIMTDINKRSVSLAKQNIKLNHVKNKNIKIFQGNLYEEVPKDAKFDTIISNPPI----- 133

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                                 G +    I       L  +G   V I        +  F
Sbjct: 134 --------------------KAGKAIIHKIISEGLNFLKPNGKIYVVIKTKHGAKSLTDF 173

Query: 240 ESRKLFLVNAFK 251
             +    V   K
Sbjct: 174 MEKTYGNVEIVK 185


>gi|183602406|ref|ZP_02963772.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|241191240|ref|YP_002968634.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|241196646|ref|YP_002970201.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|183218325|gb|EDT88970.1| hypothetical protein BIFLAC_05155 [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|240249632|gb|ACS46572.1| hypothetical protein Balac_1216 [Bifidobacterium animalis subsp.
           lactis Bl-04]
 gi|240251200|gb|ACS48139.1| hypothetical protein Balat_1216 [Bifidobacterium animalis subsp.
           lactis DSM 10140]
 gi|295794233|gb|ADG33768.1| hypothetical protein BalV_1180 [Bifidobacterium animalis subsp.
           lactis V9]
          Length = 209

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 27/178 (15%)

Query: 82  VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L       +    LDLG G GA+ LAL  ESP      VD++ +A+E+A+SN
Sbjct: 49  VDLGTSVLLRHAPMPPLEGTFLDLGCGWGAIALALALESPEATVYAVDVNERAIELARSN 108

Query: 141 AVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A  NG       + +   + V G   FDVI SNPP    +  + L   + ++ PR+  DG
Sbjct: 109 AEANGCGN----IHAGTAAVVPGDVRFDVIWSNPPI--RIGKEALHELLMEWLPRLVSDG 162

Query: 199 GIDGLSHYRT-----IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               L   R      +   ++ HL        E+G        +   S+   +++  K
Sbjct: 163 HAY-LVVQRNLGSDSLIPWLAEHLGDG----YEVG--------KYASSKGYRVIDVHK 207


>gi|238753930|ref|ZP_04615290.1| Methyltransferase small [Yersinia ruckeri ATCC 29473]
 gi|238707918|gb|EEQ00276.1| Methyltransferase small [Yersinia ruckeri ATCC 29473]
          Length = 259

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 23/181 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +  +   R+LD+G G+G + L + +  SP  +  GV++   A   A  NA  +   +R 
Sbjct: 53  WVPLQQARRVLDIGCGSGLIALMIAQRSSPQVQIDGVELENDAAAQASENAQASPWRDRI 112

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI--DGLSH 205
               +D     +     +D+IVSNPPY    +        RD     +   G    G   
Sbjct: 113 QIYATDVHEFAKTHVHQYDLIVSNPPYFAPAVA------CRDAARNTARYTGSLTHG--- 163

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGND--RVL 260
              + D   R +  +G   V + +    D+  +   +  F    V+  +D  G    R+L
Sbjct: 164 --ALLDCAERLMTPEGRFCVVLPHAIGEDLAALARQQGWFVRQQVDV-RDRPGKPLHRML 220

Query: 261 L 261
           L
Sbjct: 221 L 221


>gi|183603460|ref|ZP_02964394.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577112|gb|EDT97640.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC3059-06]
          Length = 193

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 71  SLVKVY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|149007219|ref|ZP_01830883.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761257|gb|EDK68224.1| hypothetical protein CGSSp18BS74_05201 [Streptococcus pneumoniae
           SP18-BS74]
          Length = 196

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 23  LLGQK----MTFLTDAGVF-----SKKIVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 74  SLVKVY-GVQATMVDINTRALDLARRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|291482478|dbj|BAI83553.1| hypothetical protein BSNT_00207 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 201

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 46/205 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +   T  S  F  +      VD      +   E+ +V    LD+G G G + L+L  +  
Sbjct: 27  DFTFTSDSGVFSKKE-----VDFGSRLLIDSFEEPEVEGSFLDVGCGYGPIGLSLASDFK 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 +D++ +A+E++  NA  NG++      QSD FS+++    F  I++NPP     
Sbjct: 82  DRTIHMIDVNERAVELSNENAEQNGIT-NVKIYQSDLFSNIDSAQTFASILTNPPIRA-- 138

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----V 233
                                  G      I +  + HL   G   + I   Q       
Sbjct: 139 -----------------------GKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIE 175

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  +F       + +  +++ A K
Sbjct: 176 KLEELFDEVSVVQKKKGYYIIKAKK 200


>gi|72160642|ref|YP_288299.1| hypothetical protein Tfu_0238 [Thermobifida fusca YX]
 gi|71914374|gb|AAZ54276.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 494

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 22/204 (10%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGW-----RDFYNV-RLTLSSDTFEPRPETELLV 82
            L D     L    +R  +  ++ +I  W     R +Y V  LT+     +PRP+  +  
Sbjct: 82  PLTDLAEAGL--LTIRDGQARALVQIKPWELADGRPYYTVSDLTVRPGQGQPRPDHVVGA 139

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
             A A     I    V R LDLG+G G   L L + +   +    D++ +AL + + +  
Sbjct: 140 GGASATLAQLIVDGPVERALDLGSGCGVQSLHLAERA--TRVCATDVNPRALWMTRLSCA 197

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +GV +  +T Q   +  V+G  FD+IVSNPP++       +  E   +  R      + 
Sbjct: 198 LSGV-DNVETRQGSLYEPVQGERFDLIVSNPPFV-------ITPETARYTYRE---SDLP 246

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
           G +    +      HL + G C +
Sbjct: 247 GDAVCAALVSAAPAHLTEGGWCQL 270


>gi|330832907|ref|YP_004401732.1| methyltransferase small [Streptococcus suis ST3]
 gi|329307130|gb|AEB81546.1| methyltransferase small [Streptococcus suis ST3]
          Length = 169

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ +VD      L  +       +LD+G G G + L L K     
Sbjct: 1   MSFMTDAGVF-----SKKMVDYGSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVF-NT 54

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +AL++A  NA  NGV  +    QS+ + +V+  F+ IVSNPP         
Sbjct: 55  KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYENVDETFNHIVSNPPIRA------ 106

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G S    +  G  + L   G  S+ I   Q        +  
Sbjct: 107 -------------------GKSVVHEVIAGAFQRLEAHGTLSIVIQKKQGAPSAKAKMEE 147

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 148 VFGNCQIIKKDKGYYILESVK 168


>gi|227549121|ref|ZP_03979170.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078818|gb|EEI16781.1| methyltransferase small [Corynebacterium lipophiloflavum DSM 44291]
          Length = 518

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 69/172 (40%), Gaps = 20/172 (11%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   F    L  S     P  +  L V SA    L       V R+LDLGTG+G   +
Sbjct: 118 IAGENRFVISDLDTSVSAHVPGRDHVLGVGSASLSLLSATPCSPVERVLDLGTGSGVQAI 177

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
              + S   + V  D+  +ALE+A++    N V    +  +  WF  V G  FD IV+NP
Sbjct: 178 --AQSSCAVEVVATDVHPRALELAEATLAANAVR-NVELREGSWFEPVAGERFDRIVANP 234

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGL---SHYRTIADGVSRHLNKDG 221
           P++  V +  +G   RD            GL      + +      +L   G
Sbjct: 235 PFV--VGLPEVGHVYRDS-----------GLWLDEASKLVVGTAPAYLAPSG 273


>gi|223932349|ref|ZP_03624352.1| methyltransferase small [Streptococcus suis 89/1591]
 gi|223899030|gb|EEF65388.1| methyltransferase small [Streptococcus suis 89/1591]
          Length = 193

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ +VD      L  +       +LD+G G G + L L K     
Sbjct: 25  MSFMTDAGVF-----SKKMVDYGSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVF-NT 78

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +AL++A  NA  NGV  +    QS+ + +V+  F+ IVSNPP         
Sbjct: 79  KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYENVDETFNHIVSNPPIRA------ 130

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G S    +  G  + L   G  S+ I   Q        +  
Sbjct: 131 -------------------GKSVVHEVIAGAFQRLEAHGTLSIVIQKKQGAPSAKAKMEE 171

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 172 VFGNCQIIKKDKGYYILESVK 192


>gi|302023865|ref|ZP_07249076.1| methyltransferase [Streptococcus suis 05HAS68]
          Length = 196

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ +VD      L  +       +LD+G G G + L L K     
Sbjct: 28  MSFMTDAGVF-----SKKMVDYGSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVF-NT 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +AL++A  NA  NGV  +    QS+ + +V+  F+ IVSNPP         
Sbjct: 82  KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYENVDETFNHIVSNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G S    +  G  + L   G  S+ I   Q        +  
Sbjct: 134 -------------------GKSVVHEVIAGAFQRLEAHGTLSIVIQKKQGAPSAKAKMEE 174

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 175 VFGNCQIIKKDKGYYILESVK 195


>gi|107024153|ref|YP_622480.1| methyltransferase small [Burkholderia cenocepacia AU 1054]
 gi|116688520|ref|YP_834143.1| methyltransferase small [Burkholderia cenocepacia HI2424]
 gi|105894342|gb|ABF77507.1| methyltransferase small [Burkholderia cenocepacia AU 1054]
 gi|116646609|gb|ABK07250.1| methyltransferase small [Burkholderia cenocepacia HI2424]
          Length = 397

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 161 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 210

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L       + V  D   +AL  A+ N    G 
Sbjct: 211 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-RIVATDHDSRALACARENVARLGH 265

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + + + +++D F +  G   ++V NPP++ +     +   V D D R+            
Sbjct: 266 AGQVEIVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 312

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 313 RGFLAGLAAHLEPGGEGWLIL 333


>gi|330900061|gb|EGH31480.1| N-methyl-transferase related protein [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 237

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 25/167 (14%)

Query: 62  NVRLTLSSDTFEPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            V L L  + + P     + LLV++  +  L R        +LDLG G+G + ++L    
Sbjct: 49  GVELFLPPNVYHPGTGLSSSLLVEALSSECLGR-------TVLDLGCGSGYIGISL--YR 99

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P    V  DIS  ++  +  N     +  R   ++SD FS+++G  FD I+ NPP ++  
Sbjct: 100 PGMDLVLADISKDSILSSTENLRRMEIPGRV--IESDLFSNLKGLRFDTILFNPPLLDKK 157

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           I         + +  I+L     G            +HL   G    
Sbjct: 158 I---------EHEAEIALC-DPHG-DLLTRFLTEAPQHLISTGCIYF 193


>gi|83719501|ref|YP_443450.1| hypothetical protein BTH_I2943 [Burkholderia thailandensis E264]
 gi|167621111|ref|ZP_02389742.1| hypothetical protein BthaB_32709 [Burkholderia thailandensis Bt4]
 gi|257137768|ref|ZP_05586030.1| hypothetical protein BthaA_00867 [Burkholderia thailandensis E264]
 gi|83653326|gb|ABC37389.1| conserved hypothetical protein [Burkholderia thailandensis E264]
          Length = 378

 Score = 89.4 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 36/211 (17%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   +  + G R      +      F P R E   LV         R          D
Sbjct: 159 RKKGVPVAALGGER------IHPHYGVFSPVRGEYVELV--------ARAPLPSTSLAFD 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +   L       + V  D   +AL  A  N    G +++ + +++D F   +G
Sbjct: 205 IGVGTGVLAAVLASRGVE-RVVATDQDKRALACAAENVARLGYAQQVEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              ++V NPP++ +     L   V D D R+            R    G++ HL     G
Sbjct: 262 RAPLVVCNPPWVPARPSSPLEYAVYDPDSRM-----------LRGFLSGLAAHLAPGGEG 310

Query: 222 LCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              +    E  G   + +++   ++  L +V
Sbjct: 311 WLILSDFAEHLGLRTRDELLGWIDAAGLAVV 341


>gi|328543734|ref|YP_004303843.1| methyltransferase small [polymorphum gilvum SL003B-26A1]
 gi|326413478|gb|ADZ70541.1| Methyltransferase small [Polymorphum gilvum SL003B-26A1]
          Length = 365

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 13/133 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R+  +   R LDL  G G   L L       + V V+I+  A  +A+ NA  NG+ ER  
Sbjct: 131 RLSAKPGDRALDLCAGPGIQALRLAAM--GAEVVAVEINPVAASLAQLNAAANGLGERIS 188

Query: 152 TLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                 + +V     FD++ +NPP +   + D +              GG DGLS  R I
Sbjct: 189 VRIGSLYQAVGARERFDLVSANPPLLP--VPDNVPYPFVGH-------GGPDGLSITRRI 239

Query: 210 ADGVSRHLNKDGL 222
            DG+   L++ G+
Sbjct: 240 LDGLPGVLSERGV 252


>gi|310825775|ref|YP_003958132.1| Predicted O-methyltransferase [Eubacterium limosum KIST612]
 gi|308737509|gb|ADO35169.1| Predicted O-methyltransferase [Eubacterium limosum KIST612]
          Length = 263

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 20/191 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  + D F         +D+ L         R   R++DLGTGTG + L L   +  
Sbjct: 18  GLKIIQNPDYFCFG------IDAVLLSWFASGAVRKKSRVIDLGTGTGIIPLLLYGRTGA 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K   ++I    +E+A  +   NG+ E+ + +  D  +  E      +DV+VSNPPY++ 
Sbjct: 72  QKIQALEIQENMVEMAGRSIACNGLEEKIEIIHGDIRNPGEQVRPTSYDVVVSNPPYMKV 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                  +E +       L G          IA    R L   G   +     +   +  
Sbjct: 132 GHGLKNPMETKAIARHEILCG-------IEDIAIFAKRMLKDRGKLFLIH---RADRLAD 181

Query: 238 IFESRKLFLVN 248
           I  + +   V 
Sbjct: 182 IMSAMRDHRVE 192


>gi|295097892|emb|CBK86982.1| Predicted O-methyltransferase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 245

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G   L L + +        V++  +A   A  NA  +  ++R 
Sbjct: 39  WAPVAGVKRILDIGTGSGLQALMLAQRTEEHVTIDAVELDPQAARQASENAADSPWADRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D   W S     +D+IVSNPPY    V       E   +           G   +
Sbjct: 99  RVECADVLTWASEQTARYDLIVSNPPYFTPGVECGTPEREQARY----------TGSLDH 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           + +    +  ++++G   V +  +     + I        +    D    +     RVLL
Sbjct: 149 KALLTSAAELISEEGFFCVVLPESTGNTFIEIARGIGW-NLRLRTDISDTEGRLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|292558414|gb|ADE31415.1| Methyltransferase [Streptococcus suis GZ1]
          Length = 196

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ +VD      L  +       +LD+G G G + L L K     
Sbjct: 28  MSFMTDAGVF-----SKKMVDYGSQVLLKTLHFEKGASVLDVGCGYGPIGLTLAKVF-ST 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +AL++A  NA  NGV+ +    QS+ + +V+  F+ IVSNPP         
Sbjct: 82  KTTLIDINSRALDLATKNAERNGVTAKI--YQSNIYENVDETFNHIVSNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G S    +  G  + L  +G  ++ I   Q        +  
Sbjct: 134 -------------------GKSVVHEVIAGAFQRLEANGTLTIVIQKKQGAPSAKAKMEE 174

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 175 VFGNCQIIKKDKGYYILESVK 195


>gi|260664919|ref|ZP_05865770.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US]
 gi|313472534|ref|ZP_07813024.1| methyltransferase domain protein [Lactobacillus jensenii 1153]
 gi|239529969|gb|EEQ68970.1| methyltransferase domain protein [Lactobacillus jensenii 1153]
 gi|260561402|gb|EEX27375.1| 16S RNA methylase RsmC [Lactobacillus jensenii SJ-7A-US]
          Length = 203

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 79/205 (38%), Gaps = 47/205 (22%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++LT  +  F  +     + +L+ + LA      E      ILD+G G G + L   K+
Sbjct: 31  DLKLTTDAGVFSKKRVDYGSGVLIRNMLA------ESPVSGNILDVGCGYGPIGLFAAKK 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+ NA  NGV+   +   S  + +V+  + +I++NPP     
Sbjct: 85  WPERQVDMVDVNERAMDLARKNAEVNGVT-NANIFASSVYENVDKQYAMILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G S    I    + HL   G   V I   Q      +
Sbjct: 142 -----------------------GKSVVSEILAKSAEHLVAGGELLVVIQKKQGAPSAKK 178

Query: 238 IFE-----------SRKLFLVNAFK 251
           + E            +  +++ + K
Sbjct: 179 LMETTFGNCEILERDKGYYILRSVK 203


>gi|238855365|ref|ZP_04645677.1| methyltransferase small domain protein [Lactobacillus jensenii
           269-3]
 gi|282934595|ref|ZP_06339842.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
 gi|238832026|gb|EEQ24351.1| methyltransferase small domain protein [Lactobacillus jensenii
           269-3]
 gi|281301347|gb|EFA93644.1| 16S RNA G1207 methylase RsmC [Lactobacillus jensenii 208-1]
          Length = 199

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 79/205 (38%), Gaps = 47/205 (22%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++LT  +  F  +     + +L+ + LA      E      ILD+G G G + L   K+
Sbjct: 27  DLKLTTDAGVFSKKRVDYGSGVLIRNMLA------ESPVSGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+ NA  NGV+   +   S  + +V+  + +I++NPP     
Sbjct: 81  WPERQVDMVDVNERAMDLARKNAEVNGVT-NANIFASSVYENVDKQYAMILTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G S    I    + HL   G   V I   Q      +
Sbjct: 138 -----------------------GKSVVSEILAKSAEHLVAGGELLVVIQKKQGAPSAKK 174

Query: 238 IFE-----------SRKLFLVNAFK 251
           + E            +  +++ + K
Sbjct: 175 LMETTFGNCEILERDKGYYILRSVK 199


>gi|332978604|gb|EGK15308.1| methyltransferase domain protein [Psychrobacter sp. 1501(2011)]
          Length = 403

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 26/202 (12%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD 83
           ++   VL  R       A     K   +          ++ +++        P  +  V 
Sbjct: 165 MNESCVLSFRDLQGALGAAQWRKKGVPVK---------SLGISVHPHYGVFAPTRQEYVQ 215

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L   LP           D+GTGTG + + L K     + +  D++ +AL+ A+ N   
Sbjct: 216 LLLDAPLP----DSCDVAYDIGTGTGLLAIVLAKRGVK-QIIATDLNPRALDCAQDNFDR 270

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+S      Q+D F +     ++IV NPP++ +       LE   +D   +        
Sbjct: 271 LGLS-NVQLQQADLFPNDVPKANLIVCNPPWLPA--KPSSPLEYAVYDANSA-------- 319

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              R    G  +HL + G   +
Sbjct: 320 -MLRGFLMGAKQHLTESGEVWL 340


>gi|239618399|ref|YP_002941721.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
 gi|239507230|gb|ACR80717.1| Methyltransferase type 11 [Kosmotoga olearia TBF 19.5.1]
          Length = 235

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 25/186 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  A    LP+  K    R+L+LGTG+GA+ + L ++    +   +D+  + +EIA  NA
Sbjct: 38  VLLAWYCVLPKATK----RVLELGTGSGAISIYLARKY-DVEITAIDVDEELIEIAHKNA 92

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N V+++   +Q     +VE    G FDV+VSNPP+     ++    + R+   R++++
Sbjct: 93  RVNNVTDKVKFMQLSSAMAVEKFSAGSFDVVVSNPPHFAHEGIES-PSQRRNSSRRLTIE 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
           G        +  A    R L   G     +      D+ R   + ++  +          
Sbjct: 152 G-------IKEFAQATGRLLKSRGAFFFIL---HPRDLTRWLSAFEMNNLGVH-----RL 196

Query: 258 RVLLFC 263
           R +   
Sbjct: 197 RFVFGT 202


>gi|329954889|ref|ZP_08295906.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
 gi|328526993|gb|EGF54004.1| methyltransferase domain protein [Bacteroides clarus YIT 12056]
          Length = 236

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +D  RILD+G G+G + L L + +P      V+I   A   A+ N  ++  S R +
Sbjct: 32  WAPVQDAKRILDVGAGSGLISLQLAQRNPEAAITSVEIDPAAAAQAQENIQSSPWSHRME 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYI 175
            +  D+     E  FD+IVSNPPY 
Sbjct: 92  VVCCDFRKYHPEDRFDLIVSNPPYF 116


>gi|326693433|ref|ZP_08230438.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc
           argentinum KCTC 3773]
          Length = 213

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 32/174 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVV--RILDLGTGTGA 110
              F N    L  +T     +  +     VD      L  ++K  +   ++LDLGTG G 
Sbjct: 21  EHHFQNFDFDLLGNTLHFTTDRGVFSKSTVDFGTRTMLDALDKTTLTDGKVLDLGTGYGP 80

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           V +A+ K+        VD++ +AL +A+ NA  NGV +     QSD +  +   + +I++
Sbjct: 81  VGVAIAKKYQRP-VDMVDVNERALALAQQNAKQNGVDQLVSVFQSDIYQQITDQYALILT 139

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           NPP                            G      +      HL   G   
Sbjct: 140 NPPIRA-------------------------GKEVVTAMLQDAVHHLVPGGKLI 168


>gi|308174333|ref|YP_003921038.1| 50S ribosomal protein L11 methyltransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607197|emb|CBI43568.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           DSM 7]
          Length = 311

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+    +T+ P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R++D+GTG+G + +A             D+   A+E A+ N   N VS+  +  
Sbjct: 172 IVQKGDRVIDVGTGSGILSIA-AAMLKAESVHAYDLDPVAVESARLNVKLNKVSDTAEVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGITGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L   G       IG  +K +V    E     ++   
Sbjct: 262 YNLLKDGGHFITSGIIG-QKKQEVKEALEKAGFTIIEIL 299


>gi|301630232|ref|XP_002944226.1| PREDICTED: uncharacterized ABC transporter ATP-binding protein
           HI_0658-like [Xenopus (Silurana) tropicalis]
          Length = 712

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 9/161 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVD-PDSVLDD-----RQRFFLTNAIVRSLKHESIHRIL 55
            A  ++   +    GL     + D PDSV +       Q         R    +    + 
Sbjct: 34  NAHDEAVWLVLWRLGLPLDSTLGDTPDSVANQPVTPTHQALVAMLFEERIATRKPTAYLT 93

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                  V   +      PR     L+ +    S+          +LDL TG G++ +  
Sbjct: 94  HEAWLMGVPFHVDERAIVPRSLIAELLANG---SIDGWLSDQTHAVLDLCTGNGSLAVLA 150

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               P  +  G DIS  AL +A+ N   +G+ E +   + +
Sbjct: 151 AMAWPEVQLCGADISSDALAVARINIERHGLQEPWRNCRPN 191


>gi|260911716|ref|ZP_05918292.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634141|gb|EEX52255.1| methyltransferase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 235

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 15/159 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----T 152
              ILD+GTGTG + L L +     +  GV+++ +A   A+ N   +  + +        
Sbjct: 35  GKHILDIGTGTGLIALMLAQRCQDAEITGVELNEQAALQAEENVDASPFAHQITIENVPI 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +     S+ G FD IVSNPP+  S+         ++ +   +L    + L+    + + 
Sbjct: 95  QRFSLQPSLHGHFDSIVSNPPFYHSLRS-------KNHE--RTLARHTESLTFTE-LFEA 144

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           VS  L  +G  S  I   Q  + +     + LF+    K
Sbjct: 145 VSLLLAPEGCFSAVIPIEQMDNFLAEAHIKGLFVSRIVK 183


>gi|113868957|ref|YP_727446.1| methylase of polypeptide chain release factors [Ralstonia eutropha
           H16]
 gi|113527733|emb|CAJ94078.1| methylase of polypeptide chain release factors [Ralstonia eutropha
           H16]
          Length = 387

 Score = 89.4 bits (221), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 21/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +        P     VD      LP           D+GTGTG +  A+L      
Sbjct: 179 LEDRIHPWYGVFSPVRGEYVDLVATEPLPA-----KTLAFDIGTGTGVLA-AVLARRGVQ 232

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  D   +AL  A+ N    G +   + +Q+D F   EG   ++V NPP++ +     
Sbjct: 233 RVVATDQDPRALACARENIAQLGYAGEVEIVQADLFP--EGRAPLVVCNPPWVPARPSSP 290

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
           +   V  +DP  +           R    G++ HL     G   +
Sbjct: 291 VERAV--YDPDSA---------MLRGFLQGLAEHLAPGGEGWLLL 324


>gi|51894217|ref|YP_076908.1| hypothetical protein STH3082 [Symbiobacterium thermophilum IAM
           14863]
 gi|51857906|dbj|BAD42064.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 206

 Score = 89.0 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 68/206 (33%), Gaps = 35/206 (16%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + R    +  F     +   VD      +  +E      +LDLG G G + +   + +P
Sbjct: 26  MDFRFVTDAGVF-----SRERVDFGSLLLIEAMEIGPADTVLDLGCGYGPIGIVAARLAP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 V+I+ +A E+A+ N   N ++   +    D    V G+ FD +V+NPP      
Sbjct: 81  QGFIYMVEINERAAELARRNLEANAIA-NAEVRVGDGLEPVAGIAFDAVVTNPPIRAGKA 139

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                     YR + D     L   G   V +   Q    + R 
Sbjct: 140 T------------------------VYR-LLDEAHAALKPGGSLWVVVQNKQGAPSMKRK 174

Query: 239 FESRKLFLVNAFKDYGGNDRVLLFCR 264
            E+     V       G  RVL   R
Sbjct: 175 LEAL-FGNVEDVARQAGY-RVLRARR 198


>gi|309810841|ref|ZP_07704642.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
 gi|308435147|gb|EFP58978.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
          Length = 517

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 12/151 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L +  A         +R V   LDLGTG G     L         V  D++ +AL 
Sbjct: 151 PDHVLGIGGASTTLARWTPRRTVRTALDLGTGCGVQAAHLAGHVE--HIVASDLATRALA 208

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
               NA  N +    + L       V G  FD+IVSNPP++ +     +     +++ R 
Sbjct: 209 FVCFNAALNDLD--VEVLAGSMLEPVAGRRFDLIVSNPPFVITPRRPGMP----EYEYR- 261

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             DGG  G +  R +   V  HL   G+   
Sbjct: 262 --DGGAVGDAVVRNLVRDVGAHLEPGGVAQF 290


>gi|212710671|ref|ZP_03318799.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM
           30120]
 gi|212686752|gb|EEB46280.1| hypothetical protein PROVALCAL_01737 [Providencia alcalifaciens DSM
           30120]
          Length = 244

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 24/165 (14%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                     LD+G+G+G + L L + +       V++   A   A  N   +  S+R  
Sbjct: 39  WAPVSPAKYALDIGSGSGLIALMLAQRNTQLHIDAVELDADAASQAHENFNASPWSDRLQ 98

Query: 152 TLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               D           +D+IVSNPPY               F+P ++        + Y  
Sbjct: 99  VFHQDIITFSEQPHRQYDLIVSNPPY---------------FEPAVACRDEQRDQARYTR 143

Query: 209 ------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
                 + D   R L  +G+  + + Y+    V  +  +    L 
Sbjct: 144 TLNHQVLLDSAKRCLAPEGIFCLVLPYDVGEKVEDMALTSGWSLA 188


>gi|315222903|ref|ZP_07864782.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
 gi|315187853|gb|EFU21589.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
          Length = 197

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 45/202 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+     +  F     ++ ++D      L  ++      +LD+G G G + L L+K    
Sbjct: 27  NMTFLTDAGVF-----SKKMIDYGSQTLLKCLDFHKQESVLDVGCGYGTLGLTLIKA-KE 80

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K   VDI+ +AL++A+ NA  N V       QS+ + +VEG F  I+SNPP        
Sbjct: 81  VKATLVDINQRALDLARQNADRNQVLA--TIFQSNIYQNVEGRFHHIISNPPIRA----- 133

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      +  G   HL   G  ++ I   Q        + 
Sbjct: 134 --------------------GKQVVHEVIAGSYAHLLDGGDLTIVIQKKQGAPSAKAKME 173

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       + +  +++ + K
Sbjct: 174 EVFGNCEILKKDKGYYILRSRK 195


>gi|255325130|ref|ZP_05366236.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141]
 gi|255297695|gb|EET77006.1| rRNA or tRNA methylase [Corynebacterium tuberculostearicum SK141]
          Length = 523

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 57/256 (22%), Positives = 95/256 (37%), Gaps = 44/256 (17%)

Query: 4   LRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV 63
           L D++  L    G +   + + P +++    R   ++     + H               
Sbjct: 95  LLDANVALADAHGKAYIALDIRPHTIVGAN-RLIFSDVDASLVDH--------------- 138

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                     P P+  L V +A    L       V  +LDLGTG+G   L  L  +   K
Sbjct: 139 ---------VPGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--K 187

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
               D+  +ALE+A++     G SE+ + LQ  WF  V G  FD +V+NPP++  V +  
Sbjct: 188 ITATDVHERALELAEATIAATGDSEKVELLQGSWFDPVAGRRFDRLVANPPFV--VGLPE 245

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVV 236
           +G   RD    ++LDG          +    + HL   G   +        G   +  V 
Sbjct: 246 VGHVYRDSG--LNLDGAS------ELVVSRATDHLTPGGTAHLLAAWVHTSGETWQQRVA 297

Query: 237 RIFESRKLFLVNAFKD 252
                + +      +D
Sbjct: 298 SWLPDKGIAAWIIQRD 313


>gi|297519416|ref|ZP_06937802.1| 16S ribosomal RNA m2G1207 methyltransferase [Escherichia coli OP50]
          Length = 144

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 23/123 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + +A  + SP  +    D+S  A+E +++    NGV    +   S+ FS 
Sbjct: 1   MLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG--EVFASNVFSE 58

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G FD+I+SNPP+                      DG    L   +T+  G  RHLN  
Sbjct: 59  VKGRFDMIISNPPFH---------------------DGMQTSLDAAQTLIRGAVRHLNSG 97

Query: 221 GLC 223
           G  
Sbjct: 98  GEL 100


>gi|303249672|ref|ZP_07335877.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253812|ref|ZP_07339946.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307246835|ref|ZP_07528901.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307248975|ref|ZP_07530984.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307253591|ref|ZP_07535459.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307255819|ref|ZP_07537621.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258007|ref|ZP_07539760.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307260271|ref|ZP_07541979.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307262400|ref|ZP_07544046.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302647335|gb|EFL77557.1| hypothetical protein APP2_0997 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651484|gb|EFL81635.1| hypothetical protein APP6_1080 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306852306|gb|EFM84545.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306854521|gb|EFM86715.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306858971|gb|EFM91016.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306861282|gb|EFM93274.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306863554|gb|EFM95484.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306865718|gb|EFM97598.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306867948|gb|EFM99778.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 236

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +    +   +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D         FD+IVSNPPY    +        R ++  ++       L          
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPYFSESLAS------RSYERDLARAATQSHLD----WLLQA 146

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            + L + G  S  + +     +V    +  LF     K
Sbjct: 147 KKWLAEQGEISFILPFEAAEKLVEQSRTSGLFCTKICK 184


>gi|50914279|ref|YP_060251.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10394]
 gi|94988677|ref|YP_596778.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94992500|ref|YP_600599.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94994489|ref|YP_602587.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|306827290|ref|ZP_07460577.1| methyltransferase domain protein [Streptococcus pyogenes ATCC
           10782]
 gi|50903353|gb|AAT87068.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10394]
 gi|94542185|gb|ABF32234.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94546008|gb|ABF36055.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|94547997|gb|ABF38043.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|304430437|gb|EFM33459.1| methyltransferase domain protein [Streptococcus pyogenes ATCC
           10782]
          Length = 208

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 37  HPFTFLTDSGVF-----SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAK-VQ 90

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 91  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 144

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 145 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 183

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 184 ATIFGNVEILRKD 196


>gi|71903581|ref|YP_280384.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS6180]
 gi|71802676|gb|AAX72029.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS6180]
          Length = 208

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 37  HPFTFLTDSGVF-----SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAK-VQ 90

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 91  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 144

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 145 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 183

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 184 ATIFGNVEILRKD 196


>gi|19746163|ref|NP_607299.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS8232]
 gi|139473697|ref|YP_001128413.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes str.
           Manfredo]
 gi|209559499|ref|YP_002285971.1| hypothetical protein Spy49_0976c [Streptococcus pyogenes NZ131]
 gi|19748342|gb|AAL97798.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
 gi|134271944|emb|CAM30182.1| putative methyltransferase [Streptococcus pyogenes str. Manfredo]
 gi|209540700|gb|ACI61276.1| Conserved hypothetical protein [Streptococcus pyogenes NZ131]
          Length = 197

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 26  HPFTFLTDSGVF-----SKKMVDFGSQVLLETLNFKENERVLDLGCGYGPLGISLAK-VQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 80  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 134 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 172

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 173 ATIFGNVEILRKD 185


>gi|294618341|ref|ZP_06697922.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1679]
 gi|291595435|gb|EFF26747.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1679]
          Length = 210

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 34  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 93

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E  D  QS+ + +V E  +  IVSNPP       
Sbjct: 94  F-VEMVDINERAVSLAQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA---- 147

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L K G  ++ I   Q        +
Sbjct: 148 ---------------------GKKVVHEILTGAYHRLKKGGTLTIVIQKKQGAPSAQKKM 186

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 187 EETFGNAEIVTKDKGYYIIKSVK 209


>gi|330815372|ref|YP_004359077.1| Methyltransferase [Burkholderia gladioli BSR3]
 gi|327367765|gb|AEA59121.1| Methyltransferase [Burkholderia gladioli BSR3]
          Length = 377

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 70/191 (36%), Gaps = 28/191 (14%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV      +   +         D+GTGTG +  ALL +  
Sbjct: 167 GARIHPHYGVFSPVRGEYVELV------ARAPLPAGAAALAFDIGTGTGVLA-ALLAQRG 219

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D   +AL  A  N    G   + + L++D F    G   ++V NPP++ +   
Sbjct: 220 VARVIATDQDPRALACAAENLERLGRDRQVELLRADLFPP--GRAPLVVCNPPWVPARPS 277

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            +    G++ HL     G   +    E  G   + 
Sbjct: 278 SPIEYAVYDPDSRM-----------LKGFLAGLAAHLEPGGEGWLILSDFAEHLGLRTRE 326

Query: 234 DVVRIFESRKL 244
            ++   ++  L
Sbjct: 327 ALLGWIDAAGL 337


>gi|307324542|ref|ZP_07603749.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
 gi|306889786|gb|EFN20765.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
          Length = 343

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 27/195 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP  E        D+GTGTG +  A+L      + V
Sbjct: 138 RVHPHYGVFSPVRGEYVDLVAEAPLPTQE-----LAFDIGTGTGVLA-AVLARRGIRRVV 191

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ NA   G+S+R + +++D +    G   ++V NPP++ +       L
Sbjct: 192 ATDQDARALGCARENAARLGLSDRIEVVEADLYPP--GRAPLVVCNPPWVPAR--PSSPL 247

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
           E   +DP              R   +G++ HL  D  G   +    E  G   + +++  
Sbjct: 248 EYAVYDPSS---------RMLRGFLNGLAGHLTPDGEGWLILSDLAEHLGLRPRAELLTA 298

Query: 239 FESRKLFLVNAFKDY 253
           F +  L  V A  D 
Sbjct: 299 FATAGLT-VTARLDI 312


>gi|262204125|ref|YP_003275333.1| methylase [Gordonia bronchialis DSM 43247]
 gi|262087472|gb|ACY23440.1| methylase [Gordonia bronchialis DSM 43247]
          Length = 249

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            +D ++P+ ++ LL D        R      VR+ DL TG+G +             + V
Sbjct: 31  GTDVYQPQEDSHLLRDEL------RDHDVSGVRVADLCTGSG-ILALEAALLGARSVLAV 83

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D    A+  A +  +      + +       +   GLFD +  NPPY+ +        EV
Sbjct: 84  DSCPAAVTAAATLCLDAPCPVQVELDDVTALTGY-GLFDFLTCNPPYVPT---PADPAEV 139

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R   P  + D G DG      +       L+  G   +
Sbjct: 140 RAAGPSHAWDAGTDGRDVIDRLCATAPALLSPGGTMLL 177


>gi|330686234|gb|EGG97846.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU121]
          Length = 202

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 78/234 (33%), Gaps = 49/234 (20%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    +P+   D++Q                   I      +++ L   +  F  R + 
Sbjct: 2   SHYYDENPEVKSDEKQ-------------------ITYECYQHSINLITDNGVFS-RDKV 41

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +   D  +   L          I D+G G G + L + K SP      +D++ +ALE+AK
Sbjct: 42  DFGSDLLIQTFLKANPPGPSKTIADVGCGYGPIGLMIAKVSPHHHITMLDVNRRALELAK 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N   N + E  D  +SD  + V+   FD +++NPP                        
Sbjct: 102 KNKKKNHI-ENADIFESDGMTQVDNNQFDFVLTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAF 250
               G +    I +   + L  +G   V I   Q      +  +      V   
Sbjct: 140 ----GKTVVHRIFEEAYQKLKSNGELFVVIQKKQGMPSAKKKMDEL-FNNVEVV 188


>gi|56478294|ref|YP_159883.1| hypothetical protein ebA5030 [Aromatoleum aromaticum EbN1]
 gi|56314337|emb|CAI08982.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 384

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 73/194 (37%), Gaps = 28/194 (14%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A       +         D+GTG+G +  A+L    
Sbjct: 175 GERIHPHYGVFSPLRGEYVGLVAEA------PLPAGAEALAFDIGTGSGVLA-AVLARRG 227

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  D   +AL  A  N    G + + + + +D F   EG   ++V NPP++ +   
Sbjct: 228 VRRIVATDQDPRALACAAENLSRLGFATQVEVVSADLFP--EGRAPLVVCNPPWVPARPT 285

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            R    G++ HL     G   +    E  G   + 
Sbjct: 286 SPVEHAVYDPDSRM-----------LRGFLSGLAGHLAPGGEGWLILSDFAEHLGLRSRA 334

Query: 234 DVVRIFESRKLFLV 247
           +++ + +   L +V
Sbjct: 335 ELLTLIDEAGLKVV 348


>gi|289167734|ref|YP_003446003.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
 gi|288907301|emb|CBJ22137.1| 16S RNA G1207 methylase RsmC [Streptococcus mitis B6]
          Length = 196

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 12/120 (10%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 23  LLGEK----MAFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     +   VDI+ +AL++A+ NA  N V       QS+ +  V+G FD ++SNPP
Sbjct: 74  SLAKAY-EVQSTMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVKGTFDHVISNPP 130


>gi|257885613|ref|ZP_05665266.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,501]
 gi|257821469|gb|EEV48599.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,501]
          Length = 201

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  ++LD+G G G + LAL   +  
Sbjct: 25  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKVLDVGCGYGPIGLALAFATQR 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E  D  QS+ + +V E  +  IVSNPP       
Sbjct: 85  F-VEMVDINERAVSLAQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA---- 138

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L K G  ++ I   Q        +
Sbjct: 139 ---------------------GKKVVHEILTGAYHRLKKGGTLTIVIQKKQGAPSAQKKM 177

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 178 EETFGNAEIVTKDKGYYIIKSVK 200


>gi|94990567|ref|YP_598667.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10270]
 gi|94544075|gb|ABF34123.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 208

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 37  HPFTFLTDSGVF-----SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAK-VQ 90

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 91  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 144

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 145 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 183

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 184 ATIFGNVEILRKD 196


>gi|71910757|ref|YP_282307.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|71853539|gb|AAZ51562.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes
           MGAS5005]
          Length = 195

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 26  HPFTFLTDSGVF-----SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAK-VQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 80  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 134 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 172

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 173 ATIFGNVEILRKD 185


>gi|15675194|ref|NP_269368.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus pyogenes M1
           GAS]
 gi|13622360|gb|AAK34089.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
          Length = 197

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 72/193 (37%), Gaps = 34/193 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +       S  F     ++ +VD      L  +  ++  R+LDLG G G + ++L K   
Sbjct: 26  HPFTFLTDSGVF-----SKKMVDFGSQVLLKTLNFKENERVLDLGCGYGPLGISLAK-VQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VDI+ +AL++A+ NA  N V+      QS+ + ++ G F+ I+SNPP       
Sbjct: 80  RVDATLVDINNRALDLARKNATNNQVA--VTIFQSNIYENISGHFEHIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                                G     +I +     L  +G  ++ I   Q     +   
Sbjct: 134 ---------------------GKRVVHSIIEKSIDFLVVNGDLTIVIQKKQGAPSAKAKM 172

Query: 241 SRKLFLVNA-FKD 252
           +     V    KD
Sbjct: 173 ATIFGNVEILRKD 185


>gi|14520742|ref|NP_126217.1| hypothetical protein PAB0359 [Pyrococcus abyssi GE5]
 gi|5457958|emb|CAB49448.1| Ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-n2-)-methyltransferase) (16S rRNA M2G1207
           methyltransferase) [Pyrococcus abyssi GE5]
          Length = 195

 Score = 89.0 bits (220), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL+++ +         +   +ILDLG G G + + +  
Sbjct: 25  YCFKFITASGVFSFGKLDRGTELLIENMIL--------KPDWKILDLGCGYGVIGI-VAS 75

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  V  DI+ +A++IA+ N   NGV    +    + +  VEG  F  I++NPP   
Sbjct: 76  RFVNY-VVMTDINKRAVQIARKNIKINGVK-NAEVRLGNLYEPVEGEKFHSIITNPPVHA 133

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-V 235
                                    G    R I      +L+  G+  + I        +
Sbjct: 134 -------------------------GKDILREIVINAPNYLHDGGMLQLVIKTKLGAKFI 168

Query: 236 VRIFESRKLFLVNA-----FKDYGGN 256
             + +     +V       ++ Y G 
Sbjct: 169 KDLMKDTFTEVVELAKGSGYRVYAGI 194


>gi|312961598|ref|ZP_07776097.1| methyltransferase small [Pseudomonas fluorescens WH6]
 gi|311284139|gb|EFQ62721.1| methyltransferase small [Pseudomonas fluorescens WH6]
          Length = 314

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           ++   T  +D     P++        A    R E   +   +D+G G G   L + +   
Sbjct: 100 HSPYPTTQADAVFFGPDSYRFAQVIEAHLQQRFE--PIKCAVDIGCGAGVGALVIAQARH 157

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + + VDI+ +AL ++  NA   G+S      QSD  +S++G FD+IV+NPPY+     
Sbjct: 158 DAQVLAVDINPRALRMSAVNAELAGLS-NVRVYQSDLLASLDGTFDLIVANPPYMN---- 212

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           D      R         GG  G      I       L   G   +  G
Sbjct: 213 DDRQRAYRH-------GGGALGEQLSVRIVSESLGRLALGGSLVLYTG 253


>gi|313884753|ref|ZP_07818508.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620014|gb|EFR31448.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 203

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++  T  +  F  +     + LLV++         E +    ILDLG G GA+ +AL K 
Sbjct: 27  DLHFTTDNGVFSKQRMDFGSHLLVETF------AQEVQLAESILDLGAGYGAMTIALAKL 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
            P    VGV+++ +AL +A++N   N V      LQ+D  S +++ +FD +++NPP    
Sbjct: 81  YPQAHLVGVELNERALNLAQTNQDLNRVES-ISWLQADATSINLDVMFDFVITNPPIRA- 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G +  +   D   ++LN  G   V I   Q    + 
Sbjct: 139 ------------------------GKAVIQAFVDQAYKYLNPGGQVWVVIQKKQGAPSMM 174

Query: 238 IFESRKLFLVNAFK 251
            +       V   K
Sbjct: 175 DYLQASFGNVTKLK 188


>gi|256789680|ref|ZP_05528111.1| methyltransferase [Streptomyces lividans TK24]
          Length = 214

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 70/187 (37%), Gaps = 16/187 (8%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +    + P+ +T LL     A +L          +LD+GT  G+  LAL       +   
Sbjct: 2   VLPGVYAPQEDTALL-----AGALSDESLPPGAAVLDVGT--GSGALALAAAGRGGRVTA 54

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
           VD+S +A+  A+ NA   G+  R      + F+ V G  FD++++NPPY+ +        
Sbjct: 55  VDVSWRAVCAARLNAARAGL--RIRVRHGNLFTPVRGESFDLVLANPPYVPAPATGRRPR 112

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL 244
                    + D G DG      I   V R L   G+  +     +       +     L
Sbjct: 113 GAAR-----AWDAGHDGRMVLDRICLEVPRLLRPGGVLLLVQSALSDPARTEALLREAGL 167

Query: 245 FLVNAFK 251
                 +
Sbjct: 168 KAAVTRR 174


>gi|253996069|ref|YP_003048133.1| methyltransferase small [Methylotenera mobilis JLW8]
 gi|253982748|gb|ACT47606.1| methyltransferase small [Methylotenera mobilis JLW8]
          Length = 380

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 28/191 (14%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  S   F P R E   LVD+A                 D+GTGTG +  A+L      
Sbjct: 171 KIHPSYGVFSPIRGEYLTLVDTA-------PLPTPCTTAFDIGTGTGVLA-AILANRGVK 222

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVD 181
             +  D + +AL+ A+ N     +      + ++ F     G  D+IV NPP++ +    
Sbjct: 223 TVIATDNAQRALDCAQKNINQLEMKNTVTVVNANLFPDDSHGKADLIVCNPPWLPARPSS 282

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVD 234
            L   + D +    L G ++GL            HLN +  G   +    E  G   + D
Sbjct: 283 VLESAIYD-ENSQMLKGFLNGL----------KAHLNDNGEGWLILSDFAEHLGLRTRDD 331

Query: 235 VVRIFESRKLF 245
           ++    +  L 
Sbjct: 332 LLAWISAAGLK 342


>gi|313639730|gb|EFS04489.1| methyltransferase [Listeria seeligeri FSL S4-171]
          Length = 201

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 49/207 (23%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +N++ T  +  F        +++L+++   FSL  +      +ILD+G G G + L + K
Sbjct: 27  FNMQFTSDNGVFSKNTVDFGSQVLIET---FSLQEVSG----KILDVGCGYGPMGLTVAK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
           E P  +   VD++ +ALE+A  NA  N ++      +S  + +V +  +  I+SNPP   
Sbjct: 80  EFPESQVDMVDVNLRALELAGENAKLNQIT-NVRIYESSVYENVADEDYQAIISNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +G   HL   G   + I   Q     
Sbjct: 139 -------------------------GKQVVHAILEGAHAHLKVGGELWIVIQKKQGGPSA 173

Query: 233 --------VDVVRIFESRKLFLVNAFK 251
                    +V ++ + +  F+  + K
Sbjct: 174 KAKMETVFGNVEQVTKEKGYFIFKSIK 200


>gi|300172663|ref|YP_003771828.1| ribosomal RNA small subunit methyltransferase C [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299887041|emb|CBL91009.1| Ribosomal RNA small subunit methyltransferase C [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 213

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 33/165 (20%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKES 119
           ++R T  S  F         VD      L  + K  ++  +ILDLGTG G V +A+ K  
Sbjct: 35  HLRFTTDSGVFSKST-----VDFGTRTMLNALNKTTIISGKILDLGTGYGPVGVAVAKYL 89

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                   D++ +AL +A+ NA  NGV    +  QSD +++V   + +I++NPP      
Sbjct: 90  QQP-VDMTDVNERALALARKNAEQNGVIGLVNVFQSDIYANVSDKYALILANPPIRA--- 145

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                 G S    +      +L   G   
Sbjct: 146 ----------------------GKSVVTAMLQESIHYLLPGGKLI 168


>gi|167582502|ref|ZP_02375376.1| hypothetical protein BthaT_30450 [Burkholderia thailandensis TXDOH]
          Length = 378

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 36/211 (17%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   +  + G R      +      F P R E   LV         R          D
Sbjct: 159 RKKGVPVAALGGER------IHPHYGVFSPVRGEYVELV--------ARAPLPSTSLAFD 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +   L       + V  D   +AL  A  N    G +++ + +++D F   +G
Sbjct: 205 IGVGTGVLAAVLASRGVE-RVVATDQDKRALACAAENVARLGYAQQVEIIEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              ++V NPP++ +     L   V D D R+            R    G++ HL     G
Sbjct: 262 RAPLVVCNPPWVPARPSSPLEYAVYDPDSRM-----------LRGFLSGLAAHLAPGGEG 310

Query: 222 LCSV----EI-GYNQKVDVVRIFESRKLFLV 247
              +    E  G   + +++   ++  L ++
Sbjct: 311 WLILSDFAEHLGLRTRDELLGWIDAAGLAVI 341


>gi|154686805|ref|YP_001421966.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           FZB42]
 gi|166223394|sp|A7Z6V9|PRMA_BACA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|154352656|gb|ABS74735.1| YqeT [Bacillus amyloliquefaciens FZB42]
          Length = 311

 Score = 89.0 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+    +T+ P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R++D+GTG+G + +A             D+   A+E A+ N   N VS+  +  
Sbjct: 172 IVQKGDRVIDVGTGSGILSIA-AAMLEAESVHAYDLDPVAVESARLNVKLNKVSDTAEVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGITGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L   G       IG  +K +V    E     ++   
Sbjct: 262 YDLLKDGGHFITSGIIG-QKKQEVKEALEKAGFTIIEIL 299


>gi|254429347|ref|ZP_05043054.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
 gi|196195516|gb|EDX90475.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
          Length = 388

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 29/170 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPF 121
           +LT+ +  F  +      +D    F L  + +      R+LDLG G G + LA L+ SP 
Sbjct: 213 QLTVHAGVFAQQQ-----LDIGARFFLDHLPQSLPAGSRVLDLGCGNGVIGLAALQASPG 267

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D S  ALE A+ N      + +      D    +E  FD I+ NPP+       
Sbjct: 268 AEMTFCDESWLALESARDNVSRYFPNRQCHFHHGDGLVGLEREFDCILLNPPFH------ 321

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                          DG + G    R + +  +R L  DG   V IG   
Sbjct: 322 ---------------DGHVVGDHVARRLFNQAARALAPDGELRV-IGNRH 355


>gi|300797691|ref|NP_001178521.1| N(6)-adenine-specific DNA methyltransferase 1 [Rattus norvegicus]
          Length = 214

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 72/193 (37%), Gaps = 12/193 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVELCLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ KA       A  N V  +     L       ++G  D++V NPPY+ +        
Sbjct: 77  DINPKAAACTLETARCNRVHLQPVITDLVQGLLPRLKGKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       +  GG +G           S+ L+  GL  +  I  N   ++ +I ++R L
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLASQLLSPRGLFYLVTIKENNPEEIFKIMKTRGL 191

Query: 245 FLVNAFKDYGGND 257
               A     G +
Sbjct: 192 QGTTALCRQAGQE 204


>gi|289433610|ref|YP_003463482.1| hypothetical protein lse_0241 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169854|emb|CBH26392.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 201

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 63/165 (38%), Gaps = 39/165 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILD+G G G + L + KE P  +   VD++ +ALE+A  NA  N ++      +S  + 
Sbjct: 62  KILDVGCGYGPMGLTVAKEFPESQVDMVDVNLRALELAGENAKLNQIT-NVRIYESSVYE 120

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +V +  +  I+SNPP                            G      I +G   HL 
Sbjct: 121 NVADEDYQAIISNPPIRA-------------------------GKQVVHAILEGAHAHLK 155

Query: 219 KDGLCSVEIGYNQK------------VDVVRIFESRKLFLVNAFK 251
             G   + I   Q              +V ++ + +  F+  + K
Sbjct: 156 VGGELWIVIQKKQGGPSAKAKMETVFGNVEQVTKEKGYFIFKSIK 200


>gi|300781027|ref|ZP_07090881.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030]
 gi|300532734|gb|EFK53795.1| exopolyphosphatase [Corynebacterium genitalium ATCC 33030]
          Length = 505

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 16/167 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++  +++     P P+  L V +A    L       V  +LDLGTG+G    AL +  
Sbjct: 116 FSDMDASVTEHV--PGPDHVLGVGAASLSLLSATPLTPVGTVLDLGTGSGVQ--ALAQAG 171

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
                   D+  +AL++A +      ++   +  +  WF  V G  FD IV+NPP++   
Sbjct: 172 TAQHVTATDVHPRALDLAAATMAGADIT-NVELREGPWFDLVAGQRFDRIVANPPFVVG- 229

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  EV      +  D G+D       +      HL  DG   +
Sbjct: 230 -----PPEVG----HVYRDSGLDLDGATELVVKQAPEHLAADGTAYI 267


>gi|190151256|ref|YP_001969781.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307264607|ref|ZP_07546189.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|262827836|sp|B3H2W9|TRMN6_ACTP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|189916387|gb|ACE62639.1| hypothetical protein APP7_1987 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306870070|gb|EFN01832.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 236

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +    +   +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTRISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D         FD+IVSNPPY    +        R ++  ++       L          
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPYFSESLAS------RSYERDLARAATQSHLD----WLLQA 146

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            + L + G  S  + +     +V    +  LF     K
Sbjct: 147 KKWLAEQGEISFILPFEAAEKLVEQSRTSGLFCTKICK 184


>gi|328554280|gb|AEB24772.1| ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           TA208]
 gi|328912677|gb|AEB64273.1| Ribosomal protein L11 methyltransferase [Bacillus amyloliquefaciens
           LL3]
          Length = 311

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 70/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+    +T+ P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWETYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R++D+GTG+G + +A             D+   A+E A+ N   N VS+  +  
Sbjct: 172 IVQKGDRVIDVGTGSGILSIA-AAMLEAESVHAYDLDPVAVESARLNVKLNKVSDTAEVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGITGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L   G       IG  +K +V    E     ++   
Sbjct: 262 YDLLKDGGHFITSGIIG-QKKQEVKEALEKAGFTIIEIL 299


>gi|145588675|ref|YP_001155272.1| methyltransferase small [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047081|gb|ABP33708.1| methyltransferase small [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 389

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 22/191 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  + +        P     ++  L   LP+  ++  +   D+G GTG + + L      
Sbjct: 173 DEEIRIHPHYGVFSPIRGEYIELLLKAPLPKAIQKSSIAF-DIGVGTGVLSVVLAV-REV 230

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K +  D   +A+  A+ N    G+  +   L+++ F   +    +IV NPP++ +    
Sbjct: 231 KKIIATDQDDRAIACAQENIERLGLESQIVVLKTNLFP--DDKAALIVCNPPWLPARPSS 288

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVD 234
            L   V D + ++            +    G+  HL     G   +    E  G   + +
Sbjct: 289 TLEYAVYDPESQM-----------LKGFLQGLKDHLLPGGEGWLILSDLAEHLGLRTREE 337

Query: 235 VVRIFESRKLF 245
           +    +   L 
Sbjct: 338 LRDWIDQAGLQ 348


>gi|229542299|ref|ZP_04431359.1| methyltransferase small [Bacillus coagulans 36D1]
 gi|229326719|gb|EEN92394.1| methyltransferase small [Bacillus coagulans 36D1]
          Length = 248

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 32/219 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F    +  LL   A              ++LDL TG 
Sbjct: 8   ERLDYLLAE----NLRIVQSPSVFAFSLDAVLLAKFAWLPI-------QKGKVLDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      +  GV+I  +  ++AK +   NG+ +R   +  D     +      
Sbjct: 57  GVIPL-LLSNRTKAEITGVEIQERLSDMAKRSVAYNGLEDRIRIIHGDLKEMPDVLGCSK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           FDV+  NPPY  S   +         +   +   +L            +    SR L + 
Sbjct: 116 FDVVTCNPPYFPSQTKNIQNENEHFAIARHEIFCTL----------EDVVKVSSRMLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY--GGND 257
           G  +      + VD++ + +  +L        Y   G +
Sbjct: 166 GKAAFVHRPGRLVDLITLMKKHRLEPKRLRFVYPKAGKE 204


>gi|167855880|ref|ZP_02478630.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           29755]
 gi|167852968|gb|EDS24232.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           29755]
          Length = 313

 Score = 88.6 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ ++  ++ +      F     +  L D+     L    K D ++  +LDLG G G + 
Sbjct: 150 WKSYHLGDLDVFALPAVFS----SAEL-DNGSKLLLSTFNKADGLKGKVLDLGCGAGVIG 204

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             L ++ P  K    DI   ALE +K     N +    D + SD FS + G FD+IVSNP
Sbjct: 205 ACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFSHIGGRFDLIVSNP 262

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + V                              +     +HLN+ G  
Sbjct: 263 PFHDGVDTA---------------------YRAVEELIAQAKQHLNRGGEL 292


>gi|227500739|ref|ZP_03930788.1| methylase of polypeptide chain release factor family protein
           [Anaerococcus tetradius ATCC 35098]
 gi|227217146|gb|EEI82499.1| methylase of polypeptide chain release factor family protein
           [Anaerococcus tetradius ATCC 35098]
          Length = 455

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 73/175 (41%), Gaps = 27/175 (15%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +    I+      +LDL +GTG   +   K +   K + ++I+ KA+ I + N   N + 
Sbjct: 139 YLAENIKFDKDAIVLDLCSGTGIQGMIAAKSAK--KVISIEINPKAVNICRLNIFLNKLD 196

Query: 148 ERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  +  + + ++ +     FD I +NPP+I            +  +  I  DGG DG   
Sbjct: 197 KIIELRKGNLYNCLNSNEKFDYIYANPPFIPMA---------KYIEYPICGDGGEDGTVI 247

Query: 206 YRTIADGVSRHLNKDG--LCSVE-IGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
            + I +G++ +L  +G  +   E +G +          +  LF     K    N+
Sbjct: 248 LKKITEGLNEYLKDNGEAIIFCECLGND----------NNPLFN-EYLKKLNNNE 291


>gi|39972627|ref|XP_367704.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15]
 gi|145016823|gb|EDK01253.1| hypothetical protein MGG_07615 [Magnaporthe oryzae 70-15]
          Length = 242

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 66/198 (33%), Gaps = 22/198 (11%)

Query: 57  WRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
              F    +T+    + P   PET           LP I  +     L++G G+G V L 
Sbjct: 44  KAQFGPHNITIHPTVYSPAYFPET-----WWYGTHLPAIVNKG--SWLEIGVGSGLVSLC 96

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +          GVDI+  A+E   +N   NG+   F    SD F  VEG FD I  N P+
Sbjct: 97  IASAGSK-TVSGVDINPNAVEFTANNLQANGLKGNFTV--SDIFEKVEGKFDFIFWNHPW 153

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQKV 233
                +       +  D    L          R        +L + G+  +    Y    
Sbjct: 154 QYDSTIPDQLKSEKTHDSEYKL---------LRRFVAEAKDYLTEKGVILLGTSAYANLD 204

Query: 234 DVVRIFESRKLFLVNAFK 251
            +  I +S         +
Sbjct: 205 AIKTIAQSNGYNHKELLR 222


>gi|268679933|ref|YP_003304364.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
 gi|268617964|gb|ACZ12329.1| methyltransferase small [Sulfurospirillum deleyianum DSM 6946]
          Length = 233

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 9/156 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+G G G + L L ++ P  +   +DI  K  EIA +NA+ N +     T + 
Sbjct: 28  KPKGRVLDVGCGCGILGLLLKRDFPTLEVHLLDIQAKNCEIAHANALANHLEMEAFTCKD 87

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 E  FD I+SNPP+    +V      +R      +L         +      VS+
Sbjct: 88  FLEERFEFKFDFIISNPPFYHQGVVKSENESLRLSRYSSAL--------PFEAFVKKVSK 139

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +L+  G         Q  +V+      KL  V A +
Sbjct: 140 NLSNRGYFCFCYDAKQLGNVMHALLENKLS-VEALR 174


>gi|228475259|ref|ZP_04059984.1| methyltransferase small domain protein [Staphylococcus hominis
           SK119]
 gi|314937154|ref|ZP_07844501.1| YbxB protein [Staphylococcus hominis subsp. hominis C80]
 gi|228270724|gb|EEK12133.1| methyltransferase small domain protein [Staphylococcus hominis
           SK119]
 gi|313655773|gb|EFS19518.1| YbxB protein [Staphylococcus hominis subsp. hominis C80]
          Length = 202

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 39/201 (19%)

Query: 58  RDFYN---VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           + FY+   ++LT  +  F        ++LLV + L    P        RI+D+G G G +
Sbjct: 19  QYFYHKSQLKLTTDAGVFSKGKVDFGSDLLVQTFLNEHPP----GPSKRIIDVGCGYGPI 74

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVS 170
            L + K SP  +   VD++ +AL +A+ N   N + +     +SD  S VE   FD +++
Sbjct: 75  GLMIAKVSPHHQMTMVDVNHRALHLAEKNKKQNQI-DNVIITESDGLSQVENEYFDFVLT 133

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP                            G +    I +   + L   G   V I   
Sbjct: 134 NPPIRA-------------------------GKNVVHRIFEEAYQKLKNQGELYVVIQKK 168

Query: 231 QK-VDVVRIFESRKLFLVNAF 250
           Q      +  E      V   
Sbjct: 169 QGMPSAKKKMEEI-FNNVETV 188


>gi|111021800|ref|YP_704772.1| methyltransferase [Rhodococcus jostii RHA1]
 gi|110821330|gb|ABG96614.1| possible methyltransferase [Rhodococcus jostii RHA1]
          Length = 215

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 14/158 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T+LL D   A  L         R+LDL  GTGA+ +     +   +   VD
Sbjct: 6   PGVYRPQHDTQLLADVLAAEHL-----GPHSRVLDLCAGTGALSVR-AAAAGAGRVTAVD 59

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +A    + N  +     R   +  D    V +  FDV+VSNPPY+ +     +   V
Sbjct: 60  VSRRAAISIRLN--SLVGGHRIRVIHGDLVEQVRDERFDVVVSNPPYVPA-----MIDAV 112

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            D  P  + D G +G +    I       L   G+  +
Sbjct: 113 PDRGPARAWDAGKNGRALLDRICCEAPDVLVAGGVLLL 150


>gi|223982606|ref|ZP_03632841.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM
           12042]
 gi|223965443|gb|EEF69720.1| hypothetical protein HOLDEFILI_00115 [Holdemania filiformis DSM
           12042]
          Length = 203

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 69/202 (34%), Gaps = 45/202 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPF 121
           + L   +  F         VD      L  I++  +   ILDLG G G + + + K  P 
Sbjct: 32  IPLITDNGVFCKSE-----VDFGSYVLLKTIKEEPLGDHILDLGCGYGVIGVTVKKMFPD 86

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + + VD++ +A+E+A  NA  N V        SD F +V      I++NPP        
Sbjct: 87  AEMLMVDVNPRAVELAVLNAQKNSVEAEVRV--SDIFGNVTETLSDILTNPPIRA----- 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      + +    HL   G   V I   Q        + 
Sbjct: 140 --------------------GKKVIYAMFEQAYDHLRPQGHLYVVIRKQQGALSAKAKIE 179

Query: 237 RIF-------ESRKLFLVNAFK 251
            IF       + +  +++ + K
Sbjct: 180 EIFGNCEVINKEKGYYILKSTK 201


>gi|15602823|ref|NP_245895.1| 16S ribosomal RNA m2G1207 methyltransferase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|81856739|sp|Q9CM79|RSMC_PASMU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|12721282|gb|AAK03042.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 328

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 31/171 (18%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + + RL        P   +   +D      L  +++    ++LDLG G G +   + 
Sbjct: 148 WKTYQHPRLGDLRIYSLPGVFSANELDVGTDLLLSTLDQPVRGKVLDLGCGAGVIGAYIK 207

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           ++ P  +    DI   AL  ++     N +    + + SD FS+V G FD+I+SNPP+  
Sbjct: 208 QQYPQVELTMADIHALALASSQRTLAENQLEA--EVIASDVFSNVAGKFDLIISNPPF-- 263

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLS-HYRT---IADGVSRHLNKDGLC 223
                                   DG+   YR    +      HL   G  
Sbjct: 264 -----------------------HDGIDTAYRAVSELIMQAKWHLVPGGEL 291


>gi|330809678|ref|YP_004354140.1| methyltransferase small domain [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377786|gb|AEA69136.1| Conserved hypothetical protein, containing Methyltransferase small
           domain [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 337

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 79/221 (35%), Gaps = 24/221 (10%)

Query: 14  VTGLSSHQ----VIVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNVRL-TL 67
           V G S       +  D    L D Q     + ++R  ++  S+  +L    F + +  T 
Sbjct: 54  VFGWSRPFAPGLISTDEQRQLQDAQVLEAHDGLLRSRVRWSSLDGLL----FAHSQFPTQ 109

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           ++D     P++                   V R +D+G G G   + + +     + + V
Sbjct: 110 ATDAVFFGPDSYRFAQLIHTHLQQNFTA--VHRAVDIGCGAGVGAIVIARARREAQVLAV 167

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +AL ++  NA    V    +  +SD    V G FD+IV+NPPY+            
Sbjct: 168 DINPQALRLSAVNAALAEVG-NVEVARSDVLQDVPGNFDLIVANPPYMADPSERAYRHGG 226

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                 +SL            I +     L   G   +  G
Sbjct: 227 GALGAGLSL-----------RIVEQALPRLAPGGSLVLYTG 256


>gi|313898203|ref|ZP_07831741.1| methyltransferase small domain protein [Clostridium sp. HGF2]
 gi|312956967|gb|EFR38597.1| methyltransferase small domain protein [Clostridium sp. HGF2]
          Length = 203

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 68/197 (34%), Gaps = 39/197 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +NV     +  F         VD     L  +L   E+    ++LD+G G G V +   K
Sbjct: 25  FNVSFITDNGVFSKDS-----VDFGTRVLLNTLHEHEEELGNQLLDMGCGYGVVGIVTKK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
             P  +   VD++ +A+E+A+ NA  N +        SD +  V G  F  I++NPP   
Sbjct: 80  AWPDKQVEMVDVNPRAVELARDNAEKNNIEANIHV--SDVYEQVSGNTFTDIITNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--D 234
                                    G +    I +    HL   G   V I   Q     
Sbjct: 138 -------------------------GKNVIYNIFEEAWNHLADQGTLWVVIRKQQGARSA 172

Query: 235 VVRIFESRKLFLVNAFK 251
           V +I E      +   K
Sbjct: 173 VTKIKEVFGNCDI-IHK 188


>gi|111018616|ref|YP_701588.1| adenine specific DNA-methyltransferase [Rhodococcus jostii RHA1]
 gi|110818146|gb|ABG93430.1| possible adenine specific DNA-methyltransferase [Rhodococcus jostii
           RHA1]
          Length = 377

 Score = 88.6 bits (219), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 26/187 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP   +       D+GTGTG +  A+L      K +
Sbjct: 167 RIHPAYGVFSPIRGEYVDLVADTPLPSHTQA-----FDIGTGTGVLA-AVLAHRGVEKVI 220

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             ++   AL  A++N    G   +   +++D F   EG   ++V NPP+I +       +
Sbjct: 221 ATELDANALACARANLDRLGYGGQVQVVETDLFP--EGRAPLVVCNPPWIPAR--PTSPI 276

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
           E   +DP              R    G++ HL     G   +    E  G   + +++ +
Sbjct: 277 EYAIYDPDS---------RMLRGFLGGLAEHLEPGGEGWLILSDIAEHLGLRTREELLTL 327

Query: 239 FESRKLF 245
            +   L 
Sbjct: 328 IDDAGLT 334


>gi|134045299|ref|YP_001096785.1| hypothetical protein MmarC5_0254 [Methanococcus maripaludis C5]
 gi|132662924|gb|ABO34570.1| protein of unknown function DUF890 [Methanococcus maripaludis C5]
          Length = 264

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 21/179 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R  + + +    D   P P     ++  L       EK D+  +L++GTG+G + + + K
Sbjct: 52  RHVFGLDMDFHEDALIPTP-----INRYLFIKNIFDEKEDIKEVLEIGTGSGIISILIAK 106

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSN 171
                     D     L+IA+ N   N ++ + + + S      D        FD+I+S 
Sbjct: 107 YF-ECNVTATDTVFDYLKIAEENISKNNLNSKINLVDSKGKIIFDIPELKNKKFDLIISY 165

Query: 172 PPYIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PPY     V       R F    +     + GG  G    + I      +LN  G+ ++
Sbjct: 166 PPYYADNSVASK----RSFGGAFASEVELIGGGSYGEVFSQKIIQEGMNYLNNGGIIAI 220


>gi|319939041|ref|ZP_08013405.1| methyltransferase domain-containing protein [Streptococcus
           anginosus 1_2_62CV]
 gi|319812091|gb|EFW08357.1| methyltransferase domain-containing protein [Streptococcus
           anginosus 1_2_62CV]
          Length = 197

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 75/202 (37%), Gaps = 45/202 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV     +  F     ++ ++D      L  ++      +LD+G G G + L L+K    
Sbjct: 27  NVTFLTDAGVF-----SKKMIDYGSQALLKCLDFHKQESVLDVGCGYGTLGLTLVKA-KE 80

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VDI+ +AL++A+ NA  N V       QS+ + +VEG F  I+SNPP        
Sbjct: 81  VEATLVDINQRALDLARQNAERNQVLA--TIFQSNLYQNVEGRFHHIISNPPIRA----- 133

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVV 236
                               G      +  G   HL   G  ++ I   Q        + 
Sbjct: 134 --------------------GKQVVHEVITGSYTHLLDGGDLTIVIQKKQGAPSAKAKME 173

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F       + +  +++ + K
Sbjct: 174 EVFGNCEILKKDKGYYILRSRK 195


>gi|300742198|ref|ZP_07072219.1| putative transferase [Rothia dentocariosa M567]
 gi|300381383|gb|EFJ77945.1| putative transferase [Rothia dentocariosa M567]
          Length = 575

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 63/177 (35%), Gaps = 22/177 (12%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A        E+  V R LD+GTG G     LL  +        
Sbjct: 163 RPGVL--RKDHVLGIGQASLTLAQITERTPVARALDVGTGCGIQTFHLLAHAD--HVTAT 218

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           DIS +AL  A+ N + N          +  R    Q      V G  FD++VSNPP++ +
Sbjct: 219 DISPRALAFARFNLLLNAPALKLDPQNLEARVSLRQGSLLEPVAGEQFDLVVSNPPFVIT 278

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
                   +    D     DGG+ G     T+   +   L   G   +    EI  +
Sbjct: 279 PRRADESSD----DQFTYRDGGLPGDDIVSTLIRRIPEVLVPGGRAQMLGNWEIHRD 331


>gi|261365025|ref|ZP_05977908.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
 gi|288566614|gb|EFC88174.1| methyltransferase domain protein [Neisseria mucosa ATCC 25996]
          Length = 372

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 78/199 (39%), Gaps = 31/199 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++ +    F P R E   L+  A            +    D+GTG+G +  A+L +  
Sbjct: 163 GGKIHVPFGVFSPLRGEYLDLIAQA-------PLNPHIQTAFDIGTGSGVIA-AILAKRG 214

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D + KA+  A +N    G+ ++      D F   EG  D+IV NPP++ +   
Sbjct: 215 ISEIIATDTNPKAITCATANLARLGLDKQVVVQAVDLFP--EGCADLIVCNPPWLPAKPT 272

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD------ 234
             +  E   +DP  +               +GV +HLN  G   + I  +          
Sbjct: 273 SAV--ETALYDPDNA---------MLTAFLNGVRQHLNPQGEAWLIIS-DLAEHLHLRDR 320

Query: 235 --VVRIFESRKLFLVNAFK 251
             + + F++  L +V+  K
Sbjct: 321 DFLEQCFQTTSLEVVDILK 339


>gi|313890214|ref|ZP_07823849.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313121575|gb|EFR44679.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 196

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG ++F        S  F     ++ ++D      L  +   +   +LD+G G G + +
Sbjct: 23  LLG-QEF---TFFSDSGVF-----SKKMIDFGSQVLLNNLSFGEGESLLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K         +DI+ +A+E+A+ NA  N V       QS+ + +V G FD I+SNPP
Sbjct: 74  SLAKAQ-GVIATLIDINNRAIELAQKNATYNKVE--VAIYQSNIYENVTGQFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L+ +G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHEIIEKAFDFLHSNGDLTIVIQKKQGA 165

Query: 233 ----VDVVRIF-------ESRKLFLVNAFK 251
                 +  IF       + +  +++ + K
Sbjct: 166 PSAKEKMASIFGNVEILKKEKGYYILRSIK 195


>gi|308048313|ref|YP_003911879.1| methyltransferase small [Ferrimonas balearica DSM 9799]
 gi|307630503|gb|ADN74805.1| methyltransferase small [Ferrimonas balearica DSM 9799]
          Length = 341

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 28/163 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      F         +D      L  + +  V R+LD G G G +   L + +P  
Sbjct: 170 LSLASLPGVFSHGE-----LDEGTELLLQHLPEHPVGRVLDFGCGDGVIGAFLARRNPAI 224

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VDI+  AL  ++     NG+  +     S+  S VEG FD+IVSNPP+        
Sbjct: 225 ELEMVDINAMALAASQQTLAQNGLKGKV--YPSNGLSGVEGQFDLIVSNPPFHHGATQT- 281

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                   R      ++ L   G   +
Sbjct: 282 --------------------FDTARQFIRDAAKALKPGGQLII 304


>gi|27363996|ref|NP_759524.1| putative O-methyltransferase [Vibrio vulnificus CMCP6]
 gi|81844774|sp|Q8DEQ3|TRMN6_VIBVU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|27360113|gb|AAO09051.1| Predicted O-methyltransferase [Vibrio vulnificus CMCP6]
          Length = 239

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 53/156 (33%), Gaps = 10/156 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+GTGTG + L   +         VDI   A+E A+ N   +    R  
Sbjct: 37  WADFHHCQNLLDIGTGTGLLSLMCAQRYVHLSITAVDIDAHAMEAAQENFSHSPWHSRLQ 96

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               D    +    FD I+ NPPY  S                 +     D L+H   + 
Sbjct: 97  LQHGDVLKLNFTHRFDGIICNPPYFNSGEQAQATQ--------RATARHTDTLAH-DALL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
                 L  +G  +  +   +    +++ + +   L
Sbjct: 148 LRCRELLTPNGKANFVLPLTEGEQFLQLAQQQGWHL 183


>gi|541428|pir||S41759 ribosomal protein L11 methyltransferase (EC 2.1.1.-) - Clostridium
           acetobutylicum
          Length = 300

 Score = 88.6 bits (219), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 28/193 (14%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   L+                    +  +E+   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V    + L  +
Sbjct: 176 EDAEVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNV-NNIEILHGN 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+G  D+IV+N   I + +++ L  ++  F   +  DG        +  A+ V  +
Sbjct: 234 LMEVVQGKADIIVAN---IIADVINILIPDINKF---LKTDGYFISSGIIKDRAEDVIEN 287

Query: 217 LNKDGLCSVEIGY 229
           L K+    +E+GY
Sbjct: 288 LKKNKFEIIEVGY 300


>gi|259501367|ref|ZP_05744269.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
 gi|302190912|ref|ZP_07267166.1| Methyltransferase small [Lactobacillus iners AB-1]
 gi|259167220|gb|EEW51715.1| methyltransferase domain protein [Lactobacillus iners DSM 13335]
          Length = 204

 Score = 88.2 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 36/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++    +  F         VD      L  +++ ++   ILD+GTG G + L   K  P
Sbjct: 30  SLQFYTDAGVFSKTR-----VDYGSCVLLKVLKQLEISGNILDVGTGYGPLGLFAAKLWP 84

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
                 +D++ +AL +AK NA  N + +  +   S+ + S++    F +I++NPP     
Sbjct: 85  KSHVTMIDVNERALALAKRNAQLNEI-DNVNIFSSECYRSLDEQEQFGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I     ++L   G+  V I   Q      +
Sbjct: 142 -----------------------GKQVVDDILQNAKKYLQVGGILLVVIQKKQGAPSAKK 178

Query: 238 IFESRKLFLVNAFK 251
             E          K
Sbjct: 179 CLEQT-YGNCEILK 191


>gi|262831311|sp|A6LD46|TRMN6_PARD8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 237

 Score = 88.2 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 13/156 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R  
Sbjct: 32  WASTERCQRILDVGTGTGLIALMLAQRS-TAILDAIDIDSDACLQAQENIAKSPFANRIQ 90

Query: 152 TLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q+     +      +D+IVSNPPY     +D L    +  D + +L    D LS    
Sbjct: 91  VYQTSLSEYMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD- 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +     + L  +G  ++ + + Q+  ++ I     L
Sbjct: 142 LLRDSRKLLAPEGNIALVLPFEQRESLIDIAREESL 177


>gi|307296819|ref|ZP_07576637.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
 gi|306877732|gb|EFN08958.1| methyltransferase small [Sphingobium chlorophenolicum L-1]
          Length = 325

 Score = 88.2 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 62/160 (38%), Gaps = 14/160 (8%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           T + D     P++    +  +   L         RI DLGTG G   + L +  P  + +
Sbjct: 117 TTARDAVFFGPDSYRFAE-MIRQQLSLNPVSPGSRIADLGTGAGVGAVTLARLRPDARIL 175

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D++  AL  A+ NA   G+  R      D     EG FD+IV+NPPYI     D +  
Sbjct: 176 MTDVNPAALRFARINAGLAGIEARQAL--GDRLDPREGRFDLIVANPPYIA----DGMAR 229

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             RD        G + G +    +       LN  G   +
Sbjct: 230 AYRD-------GGDMHGAAVALHMTREALPRLNGGGRFLL 262


>gi|15673425|ref|NP_267599.1| hypothetical protein L65498 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12724433|gb|AAK05541.1|AE006374_6 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|326406920|gb|ADZ63991.1| ribosomal RNA small subunit methyltransferase C [Lactococcus lactis
           subsp. lactis CV56]
          Length = 200

 Score = 88.2 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 44/202 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R       F     ++  +D      L   +      +LD+G G G + L L K+   
Sbjct: 29  SMRFKTDRGVF-----SKNGIDYGSRVLLENYQPESAKSLLDVGCGYGTLGLTLAKKF-D 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +AL++ + NA+ N VS       S+ + SV   +D I+SNPP        
Sbjct: 83  LGVTMVDVNSRALDLCRQNAIDNAVSNS-KIELSNIYESVSEKYDAIISNPPIRA----- 136

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVV 236
                               G      I  G   HLN  G  ++ I   Q        + 
Sbjct: 137 --------------------GKEVVHEILAGAFGHLNDGGHLTIVIQKKQGAPSAQKKME 176

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F         +  F++ ++K
Sbjct: 177 EVFGNCQLVARDKGYFILRSYK 198


>gi|238026079|ref|YP_002910310.1| methyltransferase [Burkholderia glumae BGR1]
 gi|237875273|gb|ACR27606.1| Methyltransferase [Burkholderia glumae BGR1]
          Length = 377

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 30/191 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV         R          D+GTGTG +  A+L E  
Sbjct: 169 GARIHPHYGVFSPVRGEYVELV--------ARAPLPAATLAFDIGTGTGVLA-AVLAERG 219

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  D   +AL  A  N    G   R +  ++D F +  G   ++V NPP++ +   
Sbjct: 220 VERVVATDQDPRALACAAENLERLGYGARVELQRADLFPA--GRAPLVVCNPPWVPARPG 277

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D D R+            +    G++ HL     G   +    E  G   + 
Sbjct: 278 SPIESAVYDPDSRM-----------LKGFLAGLAAHLTPGGEGWLVLSDFAEHLGLRTRA 326

Query: 234 DVVRIFESRKL 244
            ++   E+  L
Sbjct: 327 ALLGWIEAAGL 337


>gi|206558766|ref|YP_002229526.1| putative methyltransferase [Burkholderia cenocepacia J2315]
 gi|198034803|emb|CAR50671.1| putative methyltransferase [Burkholderia cenocepacia J2315]
          Length = 377

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 68/201 (33%), Gaps = 31/201 (15%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  +          +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPAL------GGAPIHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +   L         V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPATSLAFDIGTGTGVLAAVLASRGVE-HIVATDQDLRALACARENVARLGH 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + + + ++++ F    G   ++V NPP++ +     +   V D D R+            
Sbjct: 246 AGQVEIVEANLFPP--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM-----------L 292

Query: 207 RTIADGVSRHLNKD--GLCSV 225
           R    G++ HL     G   +
Sbjct: 293 RGFLAGLAAHLEPGGEGWLIL 313


>gi|172040576|ref|YP_001800290.1| putative transferase [Corynebacterium urealyticum DSM 7109]
 gi|171851880|emb|CAQ04856.1| putative transferase [Corynebacterium urealyticum DSM 7109]
          Length = 589

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/140 (30%), Positives = 56/140 (40%), Gaps = 25/140 (17%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------- 148
               RILDLG G GA+ LAL    P    VG DIS +AL+ A  N      ++       
Sbjct: 210 PSPRRILDLGCGGGALSLALQLAYPEAHVVGTDISGRALDFAAINGTQLAQAQGQLSTGV 269

Query: 149 -----RFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                  +  +  WF  V G  FD+IVSNPP++          EV      +  D G+ G
Sbjct: 270 AAPESCIEWREGSWFEPVAGERFDLIVSNPPFVVQ------PPEVG----HVYRDSGL-G 318

Query: 203 LS-HYRTIADGVSRHLNKDG 221
           L      +      HL   G
Sbjct: 319 LDRATELVVSRAPEHLAPGG 338


>gi|281491999|ref|YP_003353979.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
 gi|281375708|gb|ADA65212.1| 16S rRNA m(2)G 1207 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
          Length = 200

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 71/202 (35%), Gaps = 44/202 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R       F     ++  +D      L   +      +LD+G G G + L L K+   
Sbjct: 29  SMRFKTDRGVF-----SKNGIDYGSRVLLENYQPESAKSLLDVGCGYGTLGLTLAKKF-D 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +AL++ + NA+ N VS       S+ + SV   +D I+SNPP        
Sbjct: 83  LGVTMVDVNSRALDLCRQNAIDNAVSNS-KIELSNIYESVSEKYDAIISNPPIRA----- 136

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVV 236
                               G      I  G   HL   G  ++ I   Q        + 
Sbjct: 137 --------------------GKEVVHEILAGAFGHLKDGGHLTIVIQKKQGAPSAQKKME 176

Query: 237 RIF-------ESRKLFLVNAFK 251
            +F         +  F++ ++K
Sbjct: 177 EVFGNCQLVARDKGYFILRSYK 198


>gi|261212228|ref|ZP_05926514.1| predicted O-methyltransferase [Vibrio sp. RC341]
 gi|260838836|gb|EEX65487.1| predicted O-methyltransferase [Vibrio sp. RC341]
          Length = 239

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 10/151 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+G+GTG + +   +  P  +   +DI   A +  + N   +  ++R      D
Sbjct: 42  PPRSILDIGSGTGLLSIMCAQRFPEAEITALDIELSAFQATEHNRKNSPWADRITCHHHD 101

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 +  F  I+ NPPY  S        +VR      +       L H + + + + +
Sbjct: 102 ILHWQPDRRFAAIICNPPYFNSGETA--QQQVR------ATARHTISLQH-QALIERLPK 152

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            L  DG+ S  +   +  D + + +   L L
Sbjct: 153 LLESDGVASFILPKTEGEDFIILAKQAGLHL 183


>gi|326203864|ref|ZP_08193726.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
 gi|325985962|gb|EGD46796.1| methyltransferase small [Clostridium papyrosolvens DSM 2782]
          Length = 198

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 34/201 (16%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               LT +S +     ET+  VD A    +        + +LD+G G GA+ L +    P
Sbjct: 24  CGSTLTFTSVSGVFSFETK--VDRASENLIKNFTP-SGLSVLDIGCGYGAIGLFIKSIFP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 +D++ +ALE  K NA +N +S   + L S+ FSS+    FD I+SNPP      
Sbjct: 81  QQTITMIDVNNRALEYTKKNAASNNLS--IEALNSNLFSSLNERTFDDIISNPPIAAGKE 138

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRI 238
           ++                           +      HL+ +G   +          + +I
Sbjct: 139 LNT-------------------------RLITESYDHLSNNGALWLVAFHNKGGSTLKKI 173

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
            E+     V      GG  RV
Sbjct: 174 METI-FGNVTDVDKSGGI-RV 192


>gi|319763928|ref|YP_004127865.1| methyltransferase small [Alicycliphilus denitrificans BC]
 gi|317118489|gb|ADV00978.1| methyltransferase small [Alicycliphilus denitrificans BC]
          Length = 379

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 30/191 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A                 D+GTGTG +  A+L    
Sbjct: 171 GDRIHPHYGVFSPVRGEYIDLVAQA--------PLPGTSLAFDIGTGTGVLA-AVLARRG 221

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  +++ +AL  A+ N    G+ +R + L +D F    G   ++V NPP++ +   
Sbjct: 222 VRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP--GRAPLVVCNPPWLPARPS 279

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D           +G    +    G+  HL     G   +    E  G   + 
Sbjct: 280 SAIEQAVYD-----------EGSRMLKGFLAGLREHLEPGGEGWLVLSDLAEHLGLRSRE 328

Query: 234 DVVRIFESRKL 244
           D++    +  L
Sbjct: 329 DLLGWIAAAGL 339


>gi|184200118|ref|YP_001854325.1| hypothetical protein KRH_04720 [Kocuria rhizophila DC2201]
 gi|183580348|dbj|BAG28819.1| hypothetical protein [Kocuria rhizophila DC2201]
          Length = 576

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 63/177 (35%), Gaps = 22/177 (12%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A    +    +R V   LDLGTG G     LL  +        
Sbjct: 162 RPGVL--RHDHVLGIGGASTTLVQSTPRRPVATALDLGTGCGIQTFHLLAHAE--HVTAT 217

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           DIS +AL   + N + N          + +R           V G  FD++VSNPP++  
Sbjct: 218 DISERALATTRFNLLLNAPALGLDPEHLEDRVSLELGSMLEPVAGRSFDMVVSNPPFV-- 275

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
             +        D +     DGG+ G    R +   +   L   G   +    EI ++
Sbjct: 276 --ITPRTPRESDTERFTYRDGGLPGDRIVRELLSTLPSVLAPGGTAHLLANWEIPHD 330


>gi|288927581|ref|ZP_06421428.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330415|gb|EFC68999.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 236

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 15/159 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-----T 152
             RILD+GTGTG + L L +  P  +  GV++  +A   A+ N   +  +++        
Sbjct: 35  GKRILDIGTGTGLIALMLAQRYPDAEITGVELDEQAALQAQENVAGSPFAQQVTINNTPI 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                   + G F  IVSNPP+  S+         +  +   +L    + L+    +   
Sbjct: 95  QHFSHQPDLHGRFTSIVSNPPFYHSLKS-------KSHE--RTLARHTESLTFTE-LFQC 144

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           VS  L  DG  S  I   Q  + +     + LF+    K
Sbjct: 145 VSLLLAPDGCFSAVIPTEQMDNFLAEACIKGLFVSRLIK 183


>gi|254428746|ref|ZP_05042453.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
 gi|196194915|gb|EDX89874.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
          Length = 324

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 29/150 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  ++         +++D+G G G + + L ++   ++  GVD+S  A+  +  +   NG
Sbjct: 175 LLAAMEAHTLGKPGKVIDMGCGAGVISVWLARQ--GWQVQGVDVSASAVAASTDSLARNG 232

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  R   +  D FS ++G  D++V+NPP+ +                             
Sbjct: 233 LQGRI--MGGDLFSPIQGRVDMVVTNPPFHDRRQRTT---------------------DI 269

Query: 206 YRTIADGVSRHLNKDGLCSV----EIGYNQ 231
            R +      HL   G+  +    E+ Y Q
Sbjct: 270 TRRLIAEAPSHLKSGGVLWLVANRELPYVQ 299


>gi|330823808|ref|YP_004387111.1| methyltransferase small [Alicycliphilus denitrificans K601]
 gi|329309180|gb|AEB83595.1| methyltransferase small [Alicycliphilus denitrificans K601]
          Length = 379

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 30/191 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV  A                 D+GTGTG +  A+L    
Sbjct: 171 GDRIHPHYGVFSPVRGEYIDLVAQA--------PLPGTSLAFDIGTGTGVLA-AVLARRG 221

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + V  +++ +AL  A+ N    G+ +R + L +D F    G   ++V NPP++ +   
Sbjct: 222 VRRVVATELAPRALACAQDNLRRLGLQDRVELLAADLFPP--GRAPLVVCNPPWLPARPS 279

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V D           +G    +    G+  HL     G   +    E  G   + 
Sbjct: 280 SAIEQAVYD-----------EGSRMLKGFLAGLREHLEPGGEGWLVLSDLAEHLGLRSRE 328

Query: 234 DVVRIFESRKL 244
           D++    +  L
Sbjct: 329 DLLGWIAAAGL 339


>gi|83311262|ref|YP_421526.1| O-methyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82946103|dbj|BAE50967.1| Predicted O-methyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 255

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 11/158 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +PR      +D  L      +  R   R+LDLG G GA  L LL   P  +  G+++  
Sbjct: 20  LQPRDGYRAAIDPVL--LAAALGARPGERVLDLGCGVGAAALCLLARCPDVEVDGLEVQE 77

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRD 189
              E+A+ NAV N V   F     D      GL  +  +++NPP+ E         E R 
Sbjct: 78  TLAELARRNAVLNAVEGCFGIHLGDAAKPPAGLGGYHHVMTNPPFFERGSGTSAANESR- 136

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                ++     GL           + L   G  ++  
Sbjct: 137 -----AMAHEEKGLDLA-GWLKAAVKLLRPKGRLTLIH 168


>gi|313125976|ref|YP_004036246.1| hemk-related methylase [Halogeometricum borinquense DSM 11551]
 gi|312292341|gb|ADQ66801.1| HemK-related putative methylase [Halogeometricum borinquense DSM
           11551]
          Length = 202

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 17/186 (9%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + ++P  ++ LL ++ +  +          R L++GTG+G V     +++     V  D+
Sbjct: 15  NVYQPAEDSALLAEAVVDHAR--------GRFLEVGTGSGWVAEQAARKADVDCVVASDV 66

Query: 130 SCKALEIAKSNAVTNGVSER--FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           +  A E A+              + ++++  +   +G FD +  NPPY+ +   D    +
Sbjct: 67  NPHACESARKRGEKLRAEGHLGIEAVRANLVNPFRDGSFDTVAFNPPYLPT-DPDNEWDD 125

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLF 245
             +     +L GG  G        D V R L   G   + +       +V    ESR   
Sbjct: 126 WMEH----ALSGGESGRKFLNPFVDEVGRILTDGGRVLLLVSSLTGFDEVTERVESRGFD 181

Query: 246 LVNAFK 251
                +
Sbjct: 182 YETVVQ 187


>gi|172079624|ref|ZP_02709675.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1873-00]
 gi|172042082|gb|EDT50128.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC1873-00]
 gi|332203991|gb|EGJ18058.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47368]
          Length = 193

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 20  LLGEK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 71  SLVKVY-GVQATMVDINTRALDLAQRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLEIGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|111657488|ref|ZP_01408234.1| hypothetical protein SpneT_02001313 [Streptococcus pneumoniae
           TIGR4]
 gi|183603472|ref|ZP_02715072.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC0288-04]
 gi|183603794|ref|ZP_02721432.2| methyltransferase small domain superfamily [Streptococcus
           pneumoniae MLV-016]
 gi|221231625|ref|YP_002510777.1| methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225854347|ref|YP_002735859.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae JJA]
 gi|225861263|ref|YP_002742772.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298230687|ref|ZP_06964368.1| methyltransferase small domain [Streptococcus pneumoniae str.
           Canada MDR_19F]
 gi|298254394|ref|ZP_06977980.1| methyltransferase small domain [Streptococcus pneumoniae str.
           Canada MDR_19A]
 gi|183574719|gb|EDT95247.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae CDC0288-04]
 gi|183578489|gb|EDT99017.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae MLV-016]
 gi|220674085|emb|CAR68602.1| putative methyltransferase [Streptococcus pneumoniae ATCC 700669]
 gi|225722342|gb|ACO18195.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae JJA]
 gi|225727139|gb|ACO22990.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|332204845|gb|EGJ18910.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47901]
          Length = 193

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 20  LLGEK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 71  SLVKVY-GVQATMVDINTRALDLAQRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLEIGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|15900728|ref|NP_345332.1| hypothetical protein SP_0841 [Streptococcus pneumoniae TIGR4]
 gi|148990349|ref|ZP_01821535.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|148997084|ref|ZP_01824738.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae
           SP11-BS70]
 gi|194398552|ref|YP_002037476.1| methyltransferase small domain [Streptococcus pneumoniae G54]
 gi|298503153|ref|YP_003725093.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|307067437|ref|YP_003876403.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200]
 gi|14972315|gb|AAK74972.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
 gi|147756784|gb|EDK63824.1| hypothetical protein CGSSp11BS70_09990 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147924378|gb|EDK75469.1| pantothenate kinase [Streptococcus pneumoniae SP6-BS73]
 gi|194358219|gb|ACF56667.1| Methyltransferase small domain [Streptococcus pneumoniae G54]
 gi|298238748|gb|ADI69879.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|306408974|gb|ADM84401.1| 16S RNA G1207 methylase RsmC [Streptococcus pneumoniae AP200]
          Length = 196

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 23  LLGEK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 74  SLVKVY-GVQATMVDINTRALDLAQRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKQVVHEIIEKSKDFLEIGGDLTIVIQKKQGA 165

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 166 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 195


>gi|227833283|ref|YP_002834990.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
 gi|262184268|ref|ZP_06043689.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454299|gb|ACP33052.1| putative transferase [Corynebacterium aurimucosum ATCC 700975]
          Length = 525

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/215 (27%), Positives = 87/215 (40%), Gaps = 23/215 (10%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG--WRDFYNVRLTL 67
               V G      ++D   VL D          +R       H I+G     F +V  +L
Sbjct: 87  LFSDVLGARLATQLIDCGVVLSDEHGTAYVAYDIR------PHIIVGKNRVVFSDVDASL 140

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                 P PE  L V SA    L       V  +LDLGTG+G   L  L  +   + V  
Sbjct: 141 VDHV--PGPEHVLGVGSASLSLLHSTPTTPVESVLDLGTGSGVQVLGQLDSAQ--RIVAT 196

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLE 186
           D+  +ALE+A++  +T    +R +     W+  VE   FD IV+NPP++  V +  +G  
Sbjct: 197 DVHERALELARATVLTAEAEDRVELRHGSWYEPVENERFDRIVANPPFV--VGLPEVGHV 254

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            RD    ++LDG          +      HLN  G
Sbjct: 255 YRDSG--LNLDGAS------ELVVSQAVEHLNPGG 281


>gi|219872063|ref|YP_002476438.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           SH0165]
 gi|219692267|gb|ACL33490.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 313

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +   ++ +      F     +  L D+     L    K D ++  +LDLG G G + 
Sbjct: 150 WKSYRLGDLDVFALPAVFS----SAEL-DNGSKLLLSTFNKADGLKGKVLDLGCGAGVIG 204

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             L ++ P  K    DI   ALE +K     N +    D + SD FS + G FD+IVSNP
Sbjct: 205 ACLKQQFPKIKLTMSDIHAMALESSKRTLAENQLEG--DVVASDVFSHIGGRFDLIVSNP 262

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + V                              +     +HLN+ G  
Sbjct: 263 PFHDGVDTA---------------------YRAVEELIAQAKQHLNRGGEL 292


>gi|325269122|ref|ZP_08135742.1| methyltransferase [Prevotella multiformis DSM 16608]
 gi|324988509|gb|EGC20472.1| methyltransferase [Prevotella multiformis DSM 16608]
          Length = 243

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 12/133 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---Q 154
              ILD+GTGTG + L + +  P      +++   AL  A+ N + +   +R   +    
Sbjct: 44  GAHILDIGTGTGLIALMMAQRFPSAHIDAIEMDEGALADARLNIMRSPFKDRISVIGVTL 103

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             + +  +  +D IV NPPY  + + + L           +     D LS Y  +A   +
Sbjct: 104 QRYRAQADRPYDAIVCNPPYFINSLKNPLQQ--------RAAARHTDTLS-YGELARHAA 154

Query: 215 RHLNKDGLCSVEI 227
             L + G  SV I
Sbjct: 155 GLLKEGGTLSVII 167


>gi|146318741|ref|YP_001198453.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33]
 gi|146320945|ref|YP_001200656.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33]
 gi|253751842|ref|YP_003024983.1| methyltransferase [Streptococcus suis SC84]
 gi|253753665|ref|YP_003026806.1| methyltransferase [Streptococcus suis P1/7]
 gi|253755454|ref|YP_003028594.1| methyltransferase [Streptococcus suis BM407]
 gi|145689547|gb|ABP90053.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 05ZYH33]
 gi|145691751|gb|ABP92256.1| 16S RNA G1207 methylase RsmC [Streptococcus suis 98HAH33]
 gi|251816131|emb|CAZ51755.1| putative methyltransferase [Streptococcus suis SC84]
 gi|251817918|emb|CAZ55695.1| putative methyltransferase [Streptococcus suis BM407]
 gi|251819911|emb|CAR45978.1| putative methyltransferase [Streptococcus suis P1/7]
 gi|319758197|gb|ADV70139.1| 16S RNA G1207 methylase RsmC [Streptococcus suis JS14]
          Length = 196

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ +VD      L  +       +LD+G G G + L L K     
Sbjct: 28  MSFMTDAGVF-----SKKMVDYGSQVLLKNLYFEKGASVLDVGCGYGPIGLTLAKVF-ST 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +DI+ +AL++A  NA  NGV  +    QS+ + +V+  F+ IVSNPP         
Sbjct: 82  KTTLIDINSRALDLATKNAERNGVIAKI--YQSNIYENVDETFNHIVSNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G S    +  G  + L   G  S+ I   Q        +  
Sbjct: 134 -------------------GKSVVHEVIAGAFQRLEAHGTLSIVIQKKQGAPSAKAKMEE 174

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 175 VFGNCQIIKKDKGYYILESVK 195


>gi|257878705|ref|ZP_05658358.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,230,933]
 gi|257881346|ref|ZP_05660999.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,502]
 gi|257890564|ref|ZP_05670217.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,410]
 gi|260558265|ref|ZP_05830461.1| methyltransferase [Enterococcus faecium C68]
 gi|257812933|gb|EEV41691.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,230,933]
 gi|257817004|gb|EEV44332.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,502]
 gi|257826924|gb|EEV53550.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,410]
 gi|260075439|gb|EEW63745.1| methyltransferase [Enterococcus faecium C68]
          Length = 201

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 25  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E  D  QS+ + +V E  +  IVSNPP       
Sbjct: 85  F-VEMVDINERAVSLAQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA---- 138

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L K G  ++ I   Q        +
Sbjct: 139 ---------------------GKKVVHEILTGAYPRLKKGGTLTIVIQKKQGAPSAQKKM 177

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 178 EETFGNAEIVTKDKGYYIIKSVK 200


>gi|69247085|ref|ZP_00604217.1| Methyltransferase small [Enterococcus faecium DO]
 gi|258615232|ref|ZP_05713002.1| hypothetical protein EfaeD_05923 [Enterococcus faecium DO]
 gi|293562924|ref|ZP_06677391.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1162]
 gi|293567952|ref|ZP_06679293.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1071]
 gi|294623795|ref|ZP_06702623.1| 16S RNA methylase [Enterococcus faecium U0317]
 gi|314937587|ref|ZP_07844913.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|314942914|ref|ZP_07849727.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|314947950|ref|ZP_07851354.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
 gi|314950866|ref|ZP_07853935.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|314991485|ref|ZP_07856962.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|314994995|ref|ZP_07860115.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|68194969|gb|EAN09436.1| Methyltransferase small [Enterococcus faecium DO]
 gi|291589537|gb|EFF21344.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1071]
 gi|291596749|gb|EFF27972.1| 16S RNA methylase [Enterococcus faecium U0317]
 gi|291605050|gb|EFF34517.1| methyltransferase small domain superfamily [Enterococcus faecium
           E1162]
 gi|313590721|gb|EFR69566.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|313593965|gb|EFR72810.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|313596875|gb|EFR75720.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|313598386|gb|EFR77231.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|313642964|gb|EFS07544.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|313645548|gb|EFS10128.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
          Length = 210

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 34  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 93

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E  D  QS+ + +V E  +  IVSNPP       
Sbjct: 94  F-VEMVDINERAVSLAQGNAKRNQI-EHVDIHQSNIYEAVHEETYAAIVSNPPIRA---- 147

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L K G  ++ I   Q        +
Sbjct: 148 ---------------------GKKVVHEILTGAYPRLKKGGTLTIVIQKKQGAPSAQKKM 186

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 187 EETFGNAEIVTKDKGYYIIKSVK 209


>gi|293194295|ref|ZP_06609981.1| transferase [Actinomyces odontolyticus F0309]
 gi|292819742|gb|EFF78756.1| transferase [Actinomyces odontolyticus F0309]
          Length = 563

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 15/166 (9%)

Query: 71  TFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           T +P  +  +L +  A    L    +  V   LD+G G G   L L   +   + V  D+
Sbjct: 191 TGKPLSDDHVLGIGGATLTLLEMTVREQVDSALDVGCGCGIQALYLATHAD--RVVATDL 248

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S +A  + + NA  N      D  +   F  VEG  FD+IV+NPP++ +         + 
Sbjct: 249 SSRACALTQFNAALNEAV--IDVREGSLFEPVEGETFDLIVTNPPFVITPDSVRGASGLL 306

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
           ++      DGG+D  +  R +  G    +N+ G   +    EI  +
Sbjct: 307 EY-----RDGGMDRDNLIRAVLRGAPACMNEGGTLQMLANWEIPAD 347


>gi|239825614|ref|YP_002948238.1| methyltransferase small [Geobacillus sp. WCH70]
 gi|239805907|gb|ACS22972.1| methyltransferase small [Geobacillus sp. WCH70]
          Length = 249

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 79/203 (38%), Gaps = 28/203 (13%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++R+  S   F    +  LL                  +I+DL TG 
Sbjct: 8   ERLDYLLNE----DIRIIQSPSVFSFSLDAVLLAKFVYMPI-------QKGQIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L LL      K +G++I  +  ++AK +   NG+ ++ + +  D   + +      
Sbjct: 57  GVIPL-LLSMRTKGKIIGIEIQERLCDMAKRSVQYNGLEKQIEIIHGDIKDAPKQLGYSK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY---RTIADGVSRHLNKDG 221
           +DV+  NPPY  ++  + +   +      +++         Y     +    S+ L + G
Sbjct: 116 YDVVTCNPPYFPTISKEEMNKNI-----HLAIARHE----IYCTLEDVIRVSSQLLKQGG 166

Query: 222 LCSVEIGYNQKVDVVRIFESRKL 244
             +      + +D++ +    +L
Sbjct: 167 KAAFVHRPGRLLDIITLMRKYRL 189


>gi|313498783|gb|ADR60149.1| Methyltransferase small [Pseudomonas putida BIRD-1]
          Length = 317

 Score = 88.2 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L    +R V   +D+G G+G   L + + +   +   VDI+  AL     NA  
Sbjct: 125 QVIRDHLQHCPER-VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAAL 183

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            GVS       SD    + G FD+IV+NPPY+       L    R +       GG+ G 
Sbjct: 184 AGVS-NLSVEPSDLLDGISGTFDLIVANPPYM-------LDPNARIYR----HGGGVLGA 231

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
                I +     L++ G   +  G
Sbjct: 232 DLSLRIVEQARERLSRHGTLLLYTG 256


>gi|319902147|ref|YP_004161875.1| methyltransferase small [Bacteroides helcogenes P 36-108]
 gi|319417178|gb|ADV44289.1| methyltransferase small [Bacteroides helcogenes P 36-108]
          Length = 235

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  R+LD+GTGTG + L L + +   K   ++I   A + A+ N + +  ++R +
Sbjct: 32  WAPVANAKRVLDVGTGTGLIALQLAQRNSDAKITAIEIDIAAAKQARDNVLHSSWADRIE 91

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIV-DCLGLEVRDF-DPRISLDGGIDGLSHYRT 208
            +  D+ +   E  FD+IVSNPPY  + +        V    +              Y  
Sbjct: 92  VVCIDFRNYQSEDKFDLIVSNPPYFINALKCPNKQRCVARHTEDLN-----------YNL 140

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +    +  L   G+ S+ I    +  V+    + KL
Sbjct: 141 LFSRAAHLLCDQGVISIIIPSEAEKLVLDTAWNHKL 176


>gi|311739607|ref|ZP_07713442.1| transferase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305423|gb|EFQ81491.1| transferase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 523

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 19/187 (10%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  L V +A    L       V  +LDLGTG+G   L  L  +   K    D+  +
Sbjct: 139 VPGPDHVLGVGAASLSLLQSTPVSPVGSVLDLGTGSGVQLLGQLDCAE--KITATDVHER 196

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL++A++     G S++ + LQ  WF  V G  FD +V+NPP++  V +  +G   RD  
Sbjct: 197 ALKLAEATIAATGDSDKVELLQGSWFDPVAGRRFDRLVANPPFV--VGLPEVGHVYRDSG 254

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKLF 245
             ++LDG          +    + HL   G   +        G   +  V      + + 
Sbjct: 255 --LNLDGAS------ELVVSRATDHLTPGGTAHLLAAWVHTSGETWQQRVASWLPDKGIA 306

Query: 246 LVNAFKD 252
                +D
Sbjct: 307 AWIIQRD 313


>gi|251782462|ref|YP_002996764.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242391091|dbj|BAH81550.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 210

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 68/188 (36%), Gaps = 33/188 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  +      R+LDLG G G + ++L K     +
Sbjct: 40  TFLTDSGVF-----SKKMIDFGSQVLLNTLHFNKGERVLDLGCGYGPLGISLAK-VQEVE 93

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+++A+ NA  N V       QS+ + +V G F+ I+SNPP          
Sbjct: 94  ATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYENVRGSFNHIISNPPIRA------- 144

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                             G      I +     L+  G  ++ I   Q     +   +  
Sbjct: 145 ------------------GKKVVHEIIEKSIDFLDDQGDLTIVIQKKQGAPSAKEKMANI 186

Query: 244 LFLVNAFK 251
              V+  K
Sbjct: 187 FGNVDIIK 194


>gi|148547726|ref|YP_001267828.1| methyltransferase small [Pseudomonas putida F1]
 gi|148511784|gb|ABQ78644.1| methyltransferase small [Pseudomonas putida F1]
          Length = 317

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 13/145 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   L    +R V   +D+G G+G   L + + +   +   VDI+  AL     NA  
Sbjct: 125 QVIRDHLQHCPER-VEHAVDIGCGSGVGALLIARAAQHAQVSAVDINPLALRYTAINAAL 183

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            GVS       SD    + G FD+IV+NPPY+       L    R +       GG+ G 
Sbjct: 184 AGVS-NLSVEPSDLLDGISGTFDLIVANPPYM-------LDPNARIYR----HGGGVLGA 231

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIG 228
                I +     L++ G   +  G
Sbjct: 232 DLSLRIVEQARERLSRHGTLLLYTG 256


>gi|283769319|ref|ZP_06342219.1| methyltransferase small domain protein [Bulleidia extructa W1219]
 gi|283104095|gb|EFC05478.1| methyltransferase small domain protein [Bulleidia extructa W1219]
          Length = 197

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 27/133 (20%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G GA+ +++L E    +   VDI+ +AL + +SN V NG+        SD F ++
Sbjct: 64  LDMGCGVGAIGISILAEHKKVEMDMVDINNRALRLCRSNVVRNGLKANVFL--SDGFKNI 121

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +  +D IVSNPP                            G        +    HL   G
Sbjct: 122 QETYDFIVSNPPI-------------------------RQGKEFLFRFYEESKSHLKDGG 156

Query: 222 LCSVEIGYNQKVD 234
              + I   Q   
Sbjct: 157 CLYIVIRKQQGAA 169


>gi|302549715|ref|ZP_07302057.1| methyltransferase small [Streptomyces viridochromogenes DSM 40736]
 gi|302467333|gb|EFL30426.1| methyltransferase small [Streptomyces viridochromogenes DSM 40736]
          Length = 229

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 74/218 (33%), Gaps = 31/218 (14%)

Query: 45  SLKHESIHRILGWR------DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
               E   R+LG        +   +  TL    F P            +     +     
Sbjct: 6   RTGREETERLLGEASGTTEFELLGLEWTLLPGVFAPFHSPST------SHYSQWLPYPAG 59

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +L++G G G   +             VDI   A++ A+ NA  +GV++R   L+SD F
Sbjct: 60  KSLLEMGCGAGVTAVYGALRGCTA-VTAVDIVPAAVDNARRNAERHGVADRVRVLESDMF 118

Query: 159 SSV--EGLFDVIV--SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            ++     +D++   SN     +  V    LE         LD    G   +R       
Sbjct: 119 RALGPGERYDLVFWNSNAIEAPADFVYTQDLE------HSVLDR---GYESHRAYLREAP 169

Query: 215 RHLNKDGLCSVEIGYNQK---VDVVRIFESRKLFLVNA 249
           RHL   G     IG+N +     + RI +   L L   
Sbjct: 170 RHLTDTGRLF--IGFNSRGDLDHLQRIADEEGLRLEKI 205


>gi|253574240|ref|ZP_04851582.1| protein-(glutamine-N5) methyltransferase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251846717|gb|EES74723.1| protein-(glutamine-N5) methyltransferase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 130

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 34/84 (40%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +   ++   L  V GL+    +          +R      I R    E    I+G ++FY
Sbjct: 32  EPGSNAELLLRHVLGLTGAAYLAALRDPFPADKRDAWEAVIRRKAAGEPAQYIIGEQEFY 91

Query: 62  NVRLTLSSDTFEPRPETELLVDSA 85
            +   ++     PRPETELLV+  
Sbjct: 92  GLTFRVNPAVLIPRPETELLVERI 115


>gi|224368758|ref|YP_002602919.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum
           HRM2]
 gi|223691474|gb|ACN14757.1| SAM-dependent methyltransferase [Desulfobacterium autotrophicum
           HRM2]
          Length = 218

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 19/173 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++P+      +D  L       +     RI DLGTG G + L L ++ P     G++I  
Sbjct: 2   YQPKTGYRFSIDPIL--LADHADPLPGDRIADLGTGCGIIPLLLSRKHPETHITGIEIQG 59

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV---IVDCLG 184
             ++IA  N   N ++++   L SD  S     + G  D++V+NPPYI+     I     
Sbjct: 60  ALVDIANKNIQKNHLTDQVTILLSDIRSLVPADLGGPVDLVVTNPPYIKQGCGRINPHPQ 119

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +   +  I+LD           + D  ++ L   G   +     +  +V+ 
Sbjct: 120 KAIARHEVEITLD----------ELLDSATKILTFRGRFMIIFPMERLNEVME 162


>gi|170017869|ref|YP_001728788.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20]
 gi|169804726|gb|ACA83344.1| 16S RNA G1207 methylase RsmC [Leuconostoc citreum KM20]
          Length = 213

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 33/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKE 118
           + +  T  S  F         VD      L  +E    +  +ILDLGTG G V +A+ K 
Sbjct: 34  HKLHFTTDSGVFSKST-----VDFGTRTMLEALETVIINDGKILDLGTGYGPVGIAIAKA 88

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +ALE+A+ NA  NGV++     QS+ +  +   + +I++NPP     
Sbjct: 89  MSR-QVDMVDVNERALELAQQNAQKNGVTQLTRIFQSNIYDKITDKYALILTNPPIRA-- 145

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                  G +    +     +HL   G   
Sbjct: 146 -----------------------GKAVVTVMLQDAIKHLQPGGKLI 168


>gi|315605276|ref|ZP_07880322.1| transferase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313093|gb|EFU61164.1| transferase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 562

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 11/157 (7%)

Query: 71  TFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           T +P  +  +L +  A    L    +  V   LD+G G G   L L   +   + V  D+
Sbjct: 190 TGKPLCDDHVLGIGGATLTLLEMTVRESVESALDVGCGCGIQALYLATHA--SRVVATDL 247

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S +A  + + NA  N      D  +   F  VEG  FD+IV+NPP++ +   D +     
Sbjct: 248 SARACALTQFNAALN--EATIDVREGSLFEPVEGETFDLIVTNPPFVIT--PDSVRGAAG 303

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            F+ R   DGG+D  +  R +       + + G   +
Sbjct: 304 LFEYR---DGGMDRDNLVRAVLREAPACMARGGTLQM 337


>gi|311112122|ref|YP_003983344.1| methyltransferase [Rothia dentocariosa ATCC 17931]
 gi|310943616|gb|ADP39910.1| methyltransferase [Rothia dentocariosa ATCC 17931]
          Length = 578

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 63/177 (35%), Gaps = 22/177 (12%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A        E+  V R LD+GTG G     LL  +        
Sbjct: 166 RPGVL--RKDHVLGIGQASLTLAQITERTPVARALDVGTGCGIQTFHLLAHAD--HVTAT 221

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           DIS +AL  A+ N + N          +  R    Q      V G  FD++VSNPP++ +
Sbjct: 222 DISPRALAFARFNLLLNAPALKLDPQNLEARVSLRQGSLLDPVAGEQFDLVVSNPPFVIT 281

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
                   +    D     DGG+ G     T+   +   L   G   +    EI  +
Sbjct: 282 PRRADESSD----DQFTYRDGGLPGDDIVSTLIRRIPEVLVPGGRAQMLGNWEIHRD 334


>gi|307243788|ref|ZP_07525920.1| methyltransferase small domain protein [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492842|gb|EFM64863.1| methyltransferase small domain protein [Peptostreptococcus stomatis
           DSM 17678]
          Length = 249

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 26/198 (13%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +R+  ++  F         +D+ L  +  R++K    +++DLGTGTG + + L  +S
Sbjct: 16  FNGLRIIQNTKGFCFG------IDAVLLANFTRVKKN--AKLVDLGTGTGIIPILLAGKS 67

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
              K +G++I  +  E+A  +   N + +R + L  D   +V    +G  D++VSNPPY+
Sbjct: 68  SASKIIGIEIQDEVAEMASRSVKLNQLEDRVEILNMDMKDAVGVLGKGQMDLVVSNPPYM 127

Query: 176 ESVIV--DCLGLEVRDFDPRISLDGGIDGLS-HYRTIADGVSRHLNKDGLCSVEIGYNQK 232
            S  +  +     +              GL      +    S  +  +G   +    N+ 
Sbjct: 128 HSNGLINENDKKAISRH-----------GLKCDIEDVIRVASDLVKPNGKFFMVNRPNRL 176

Query: 233 VDVVRIFESRKLFLVNAF 250
           VD++ I  S KL      
Sbjct: 177 VDMLAIARSYKLEAKQIR 194


>gi|154508469|ref|ZP_02044111.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798103|gb|EDN80523.1| hypothetical protein ACTODO_00969 [Actinomyces odontolyticus ATCC
           17982]
          Length = 563

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 71  TFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           T +P  +  +L +  A    L    +  V   LD+G G G   L L   +   + V  D+
Sbjct: 191 TGKPLSDDHVLGIGGATLTLLEMTVREQVDSALDVGCGCGIQALYLATHAD--RVVATDL 248

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR 188
           S +A  + + NA  N      D  +   F  VEG  FD+IV+NPP++ +         + 
Sbjct: 249 SSRACALTQFNAALNEAV--IDVREGSLFEPVEGETFDLIVTNPPFVITPDSVRGAAGLL 306

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
           ++      DGG+D  +  R +  G    +N  G   +    EI  +
Sbjct: 307 EY-----RDGGMDRDNLIRAVLRGAPACMNAGGTLQMLANWEIPAD 347


>gi|315634703|ref|ZP_07889987.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           segnis ATCC 33393]
 gi|315476651|gb|EFU67399.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           segnis ATCC 33393]
          Length = 334

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + + +L   +    P   +   +D   A  L  ++      +LD+G G G +   + 
Sbjct: 155 WKSYQHPQLADVTVYALPGVFSAAELDGGTALLLSTLKNVSGD-VLDIGCGAGVIGSYIQ 213

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           K  P  K V  DI   ALE A+     N +      L SD FS VEG FD+I+SNPP+ +
Sbjct: 214 KHHPKTKLVMTDIHAMALESAQRTLRENQLQG--TVLASDVFSHVEGKFDLIISNPPFHD 271

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +      +                       +      HL   G  
Sbjct: 272 GIDTAYTAVN---------------------ELIKQAKWHLKAGGEL 297


>gi|50540066|ref|NP_001002502.1| N(6)-adenine-specific DNA methyltransferase 1 [Danio rerio]
 gi|49901131|gb|AAH76297.1| Zgc:92834 [Danio rerio]
          Length = 219

 Score = 87.8 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 10/180 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           S+ +EP  ++ LL+D AL     R++       L++G+G+G +   L          +  
Sbjct: 16  SEVYEPAEDSFLLMD-ALEKDADRLKDSRPCVCLEVGSGSGVISAFLASLIGAQALYICT 74

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           D++  A + +   ++ N +  +     L       + G  DV+V NPPY+ +        
Sbjct: 75  DVNADAAQCSMQTSILNNLHVQPVVTDLVECLLPRLNGKVDVLVFNPPYVATP-----SE 129

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       S  GG+ G          +   L++ GL  +  +  N    +V +     L
Sbjct: 130 EVGSHGVEASWAGGLHGREVMNRFFPMIPDLLSEHGLFYLVTVSDNDPEGIVDLLARSGL 189


>gi|255014290|ref|ZP_05286416.1| hypothetical protein B2_10291 [Bacteroides sp. 2_1_7]
          Length = 237

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 13/156 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R  
Sbjct: 32  WASTERCQRILDVGTGTGLIALMLAQRS-TAILDAIDIDLDACLQARENIAKSPFANRIQ 90

Query: 152 TLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q+     +      +D+IVSNPPY     +D L    +  D + +L    D LS    
Sbjct: 91  VYQTSLSEYMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD- 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +     + L  +G  ++ + + Q+  ++ I     L
Sbjct: 142 LLRDSRKLLAPEGNIALVLPFEQRESLIDIAREESL 177


>gi|307328253|ref|ZP_07607431.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
 gi|306886087|gb|EFN17095.1| methyltransferase small [Streptomyces violaceusniger Tu 4113]
          Length = 527

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 11/160 (6%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R    L V  A            V R+LDLGTG+G   L   + +   +    D + +AL
Sbjct: 154 RSRLVLGVGGASTTLAGLTVPAPVGRVLDLGTGSGIQALHAGRHA--TRVTATDRNPRAL 211

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            IA+     +G  E  D  +   F  V +  +D+IVSNPP++ S         V      
Sbjct: 212 AIARLTLALSGAPEP-DLREGSLFEPVRDETYDLIVSNPPFVISPRSPEGSELVYR---- 266

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
              +GG+ G    RT+    + HL   G C +   +    
Sbjct: 267 ---EGGMSGDDLCRTLVQQSAGHLADGGWCQLLANWQHVE 303


>gi|152990737|ref|YP_001356459.1| hypothetical protein NIS_0992 [Nitratiruptor sp. SB155-2]
 gi|151422598|dbj|BAF70102.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 233

 Score = 87.8 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 16/155 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD+GTG+G + L + ++ P      ++I  + +++A  NA  N               
Sbjct: 31  EVLDVGTGSGILALLIKRDYPKASVNAIEIQERFVKMANINADANKKDINIYFGN-FLHM 89

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---SLDGGIDGLSHYRTIADGVSRH 216
             E  FD IVSNPP+  +        EV      +   +   G   L          +  
Sbjct: 90  VFEKRFDWIVSNPPFYHT--------EVLRSKNEMIDTARYAGHLPLD---KFLKKANSL 138

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   G         Q   ++ +    K   +   K
Sbjct: 139 LKPRGSVLFCYDAKQIQSIMTLLHFYKFT-IETMK 172


>gi|315179239|gb|ADT86153.1| methyltransferase [Vibrio furnissii NCTC 11218]
          Length = 239

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 53/152 (34%), Gaps = 10/152 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L   +  P      VDI   A   A  N   +  + R    Q + 
Sbjct: 43  PQHILDIGTGTGLLALMCAQRFPQASITAVDIDEHAFHAASHNVAHSSWANRIQVAQQNI 102

Query: 158 F-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    D I+ NPPY                    +     D L+H   +   ++R 
Sbjct: 103 LQTQLNTPVDAIICNPPYFNDGQQSQHAQ--------RATARHTDRLNHGD-LLQAMARL 153

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           L   G  S+ +   +    +   E +  FL  
Sbjct: 154 LMPLGTASLILPAVEGEQFIAQAEQQGWFLAR 185


>gi|149926970|ref|ZP_01915228.1| methyltransferase small [Limnobacter sp. MED105]
 gi|149824191|gb|EDM83411.1| methyltransferase small [Limnobacter sp. MED105]
          Length = 397

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 17/162 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD  L   +P+  + +   + D+GTGTG +   L +       V
Sbjct: 188 RIHPYYGVFSPVRGEYVDLVLKAPMPKACEVNGSAV-DVGTGTGVLAAVLAQRW-LSNIV 245

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +ALE A+ N    G+ ++   +Q+D F   +   D+IV NPP++       +  
Sbjct: 246 ATDNDPRALECAQFNVQNLGMGKQVKVVQADLFP--DSKADLIVCNPPWLPGKPTSPIER 303

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
                    ++     G+   +    G++ HLN    G   +
Sbjct: 304 ---------AIYDENSGM--LKAYLAGLAAHLNAGGEGWLIL 334


>gi|294789277|ref|ZP_06754515.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453]
 gi|294482702|gb|EFG30391.1| methyltransferase domain protein [Simonsiella muelleri ATCC 29453]
          Length = 367

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 73/193 (37%), Gaps = 27/193 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           + ++ +    F P     L  D  L   LP     +     D+GTG+G + + L +    
Sbjct: 159 DAKIHVPFGVFSPLRGEYL--DLILQAKLP----ENCQLAFDIGTGSGILAILLAQRG-V 211

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            K +  D + +A++ A +N    G   + D LQ D+F S  GL ++IV NPP++ +    
Sbjct: 212 CKILATDNNPRAVQCAHANVARLGFDLQIDVLQQDYFPS--GLANLIVCNPPWLPAKPTS 269

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------EI-GYNQKVD 234
            +  E   +DP  +           + I       L ++G   +      E  G      
Sbjct: 270 AI--ETALYDPNHT---------MLKHILAESGNFLAENGELWLIMSDLAEHLGLRDSGS 318

Query: 235 VVRIFESRKLFLV 247
           +   F      + 
Sbjct: 319 LQTWFAQFGWKIA 331


>gi|328958740|ref|YP_004376126.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4]
 gi|328675064|gb|AEB31110.1| ribosomal RNA methyltransferase [Carnobacterium sp. 17-4]
          Length = 204

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 75/204 (36%), Gaps = 48/204 (23%)

Query: 64  RLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +    +  F  +     + LL+++          K     ILD+G G G + LAL KE P
Sbjct: 29  KFVTDTGVFSKKTVDFGSRLLIETL------DFSKMTNGDILDVGCGYGPMGLALAKEDP 82

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                 VD++ +AL +AK NA  N +S       SD + SVEG  F  IVSNPP      
Sbjct: 83  ERNVEMVDVNERALGLAKQNASNNRLS-NVLIHTSDIYESVEGKEFAAIVSNPPIRA--- 138

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV------ 233
                                 G      I  G    L KDG  ++ I   Q        
Sbjct: 139 ----------------------GKKVVHGILTGAFDLLKKDGALTIVIQKKQGAPSAQAK 176

Query: 234 ------DVVRIFESRKLFLVNAFK 251
                 +   I + +  +++ +FK
Sbjct: 177 MEETFGNAKVIVKDKGYWIIQSFK 200


>gi|256826282|ref|YP_003150242.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
 gi|256689675|gb|ACV07477.1| methyltransferase family protein [Kytococcus sedentarius DSM 20547]
          Length = 522

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 19/178 (10%)

Query: 74  PRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P PE  +L +  A         + +V R LD+GTG G   L L   +   + V  DIS +
Sbjct: 155 PLPEDHVLGIGGASVTLAAWTPRPEVARALDIGTGCGVQALHLTHHAQ--RVVATDISER 212

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           ALE A+     NGV    D         V G  FD+IVSNPP++    +      V  ++
Sbjct: 213 ALEFARFTCALNGVE--LDLRHGSLTEPVAGEEFDLIVSNPPFV----ITPRTKGVPVYE 266

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQ--KVDVVRIFESRK 243
            R   DGG++       +   V+  L   G+  +    EIG ++  +  V        
Sbjct: 267 YR---DGGVEADGITSGLIGQVAARLAPGGMAQMLGNWEIGPDEDWRDRVRPWLAGLG 321


>gi|194226162|ref|XP_001496250.2| PREDICTED: similar to putative N5-methyl-Gln methyltransferase
           [Equus caballus]
          Length = 352

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T L      A      E   V   L++G+G+G
Sbjct: 140 PLHGHVGRGAF--------SDVYEPAEDTFL---LLDALEAAAAEFTGVEICLEVGSGSG 188

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  DI+ +A       A  N V  +     L       ++G  D
Sbjct: 189 VVSAFLASMIGPQALYMCTDINPEAAACTLETARCNSVHIQPVITDLVKGLLPRLKGNVD 248

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV       +  GG +G          V   L+  GL  + 
Sbjct: 249 LLVFNPPYVVTP-----PEEVGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLV 303

Query: 227 -IGYNQKVDVVRIFESRKLF 245
            I  N   ++++  +++ L 
Sbjct: 304 TIKENNPEEILKTMKTKGLQ 323


>gi|269796546|ref|YP_003316001.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542]
 gi|269098731|gb|ACZ23167.1| methyltransferase family protein [Sanguibacter keddieii DSM 10542]
          Length = 549

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 67/172 (38%), Gaps = 29/172 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    R+LDLGTG G   L   + +     V  DIS +AL  A  NA  +GV  R D   
Sbjct: 181 RSPRTRVLDLGTGCGIQALHASRHAQ--TVVATDISERALRFAAFNAALDGV--RLDLRL 236

Query: 155 SDWFSSVEG-LFDVIVSNPPYIES---------------VIVDCLGLEVRDFDPRISLDG 198
                 V G  FD++VSNPP++ +                  D L  E+  ++ R   DG
Sbjct: 237 GSMLEPVAGEEFDLVVSNPPFVITPRRAATDGAGGAEVPSGDDSLPGEIPTYEYR---DG 293

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV----EI--GYNQKVDVVRIFESRKL 244
           G  G    R +  GV   L   G+  +    E   G      V R  +   L
Sbjct: 294 GRSGDDLVRDLVTGVGAVLAPGGVAQMLGNWEHRAGEPWTERVGRWLDESGL 345


>gi|119900142|ref|YP_935355.1| hypothetical protein azo3853 [Azoarcus sp. BH72]
 gi|119672555|emb|CAL96469.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 384

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 68/186 (36%), Gaps = 26/186 (13%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +        P     VD      LP           D+GTGTG +  ALL      + V 
Sbjct: 180 IHPHYGVFSPVRGEYVDLVAQAPLPA-----TTLAFDIGTGTGVLA-ALLARRGVERVVA 233

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            D   +AL  A  N    G++ R + LQ+D +    G   ++V NPP++       +  E
Sbjct: 234 TDQDARALACAADNLGRLGLTGRVELLQADLYPP--GRAPLVVCNPPWLPGKPSAAV--E 289

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRIF 239
              +DP              R   DG++ HL     G   +    E  G   +  ++ +F
Sbjct: 290 YAIYDPDS---------RMLRGFLDGLAAHLEPGGEGWLILSDLAEHLGLRSRETLLALF 340

Query: 240 ESRKLF 245
           ++  L 
Sbjct: 341 DAAGLK 346


>gi|254489352|ref|ZP_05102555.1| Methyltransferase small domain superfamily protein [Roseobacter sp.
           GAI101]
 gi|214041859|gb|EEB82499.1| Methyltransferase small domain superfamily protein [Roseobacter sp.
           GAI101]
          Length = 229

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 19/167 (11%)

Query: 62  NVRLTLSSDTFEPRPET--ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                +    F P       +L  +A   +L   E+     +LD+G GTG V     +  
Sbjct: 31  GFSFVVIPTVFNPVVFRAGVMLGRAAGRITLEADERDKT--MLDMGCGTGIVGAFAARN- 87

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
             F+   VDI+  A+ +AK+NA+ N  ++R   L+ D F+ V    FD++   PPY +  
Sbjct: 88  -GFRVTSVDINPDAVRVAKANALLNDQTDRITVLEGDLFAPVTSQSFDLVCFGPPYFKGP 146

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +    +          GL         +  HLN +G   V
Sbjct: 147 PKGDPLSQAFWSE----------GL--IERFCHALHNHLNPNGRALV 181


>gi|321460102|gb|EFX71148.1| hypothetical protein DAPPUDRAFT_216956 [Daphnia pulex]
          Length = 218

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 16/166 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GV 127
            + +EP  ++ L++D AL   +P I+       L++G+G+G V   L K          +
Sbjct: 19  ENVYEPAEDSFLMLD-ALESEIPFIKSLKPTICLEIGSGSGIVLTGLAKCLGSCCAYFSI 77

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESV--IVDCL 183
           DI+  A ++ +  A  N V        L       ++   D++V NPPY+ +    +D L
Sbjct: 78  DINPHAAQVTRKTACKNSVCLEVVNCDLVGPLLPQIQNKVDMLVFNPPYVPTDENEIDPL 137

Query: 184 GLEVRDFDPRISL--DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     I+L   GG  G +    +   + + ++  G+  + I
Sbjct: 138 SP--------IALSWAGGFRGRTVMDRLFPLIPQIMSPSGVFYLLI 175


>gi|291484992|dbj|BAI86067.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 311

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 69/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A             D+   A+E A+ N   N VS+     
Sbjct: 172 FVQKGDKVIDVGTGSGILSIA-AAMLKAESVHAYDLDPVAVESARLNLKLNKVSDIAQVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGIEGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L + G       IG+  K +V    E     +V   
Sbjct: 262 YSLLKEGGHFITSGIIGHK-KQEVKEALEQAGFTIVEIL 299


>gi|226309797|ref|YP_002769691.1| hypothetical protein BBR47_02100 [Brevibacillus brevis NBRC 100599]
 gi|226092745|dbj|BAH41187.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 198

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 70/201 (34%), Gaps = 44/201 (21%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R    +  F  R      +D      +  +E     R+LD+G G G + L   K +   +
Sbjct: 29  RFITDAGVFS-RDR----IDFGSVLLIENMEINSHARVLDVGCGYGPMGLTAAKLADHGR 83

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
              +D++ +A+ +A+ NA  NG+    +   SD +S V+G  FDVI++NPP         
Sbjct: 84  VTMIDVNERAVNLARRNAEANGIK-NVEVRVSDVYSGVQGEQFDVILTNPPIRA------ 136

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--------- 233
                              G      I       L + G   V I   Q           
Sbjct: 137 -------------------GKEIVHRIFVEGYDLLVEGGEMWVVIQKKQGAPSALKKLQE 177

Query: 234 ---DVVRIFESRKLFLVNAFK 251
              +V+ +   +   +  A K
Sbjct: 178 VYREVIEVDREKGYHIFRAIK 198


>gi|213510816|ref|NP_001134115.1| N6-adenine-specific DNA methyltransferase 1 [Salmo salar]
 gi|209730828|gb|ACI66283.1| N6-adenine-specific DNA methyltransferase 1 [Salmo salar]
          Length = 214

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 14/182 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVD 128
           D +EP  ++ LL+D AL     R++K      L++G+G+G V   L     P    +  D
Sbjct: 18  DVYEPAEDSFLLID-ALEQDADRLKKISPSVCLEVGSGSGVVSAFLASVIGPTALYLCTD 76

Query: 129 ISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLG 184
           ++  A +     +  NGVS +     L       + G  DV++ NPPY+   S  V   G
Sbjct: 77  VNPAAAKCTLETSRCNGVSLQPIITDLVDSLLPRLCGKVDVLLFNPPYVVTPSEEVGSKG 136

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRK 243
           +E        +  GG  G          + + L+  GL  +  +  N   ++  + +   
Sbjct: 137 IEA-------AWAGGRWGREVMDRFFPLLPKLLSNQGLFYLVTVAENNPEEITTLLKKFG 189

Query: 244 LF 245
           L 
Sbjct: 190 LQ 191


>gi|45200911|ref|NP_986481.1| AGL186Cp [Ashbya gossypii ATCC 10895]
 gi|44985681|gb|AAS54305.1| AGL186Cp [Ashbya gossypii ATCC 10895]
          Length = 219

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDV--VRILDLGTGTGAVCLALLKE---SPFFK 123
              +EP  ++ LL+D  L      + +R      + ++G G+G V   +++     P   
Sbjct: 12  ERVYEPSEDSFLLLDC-LEKERTWLRQRQPRASVVCEVGCGSGVVTAFMMQHEMPQPMSV 70

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
            +  D+S  AL        + G        ++D  + + +G  DV+V NPPY+ +  V  
Sbjct: 71  YLATDVSPWALATTAETVQSTGCRGALCAARTDLVTGLADGQVDVLVFNPPYVPAEGVPQ 130

Query: 183 LGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIF 239
                   +  +  +L+GG DG+     +   + R L   G+  +     N+  +V    
Sbjct: 131 GPAAGEREERWLEVALEGGADGMEVTTRMLGALGRVLASSGVAYILFCARNRPEEVAAGM 190

Query: 240 ESRKL 244
            +   
Sbjct: 191 RAAGW 195


>gi|291521123|emb|CBK79416.1| Predicted O-methyltransferase [Coprococcus catus GD/7]
          Length = 244

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 69/177 (38%), Gaps = 33/177 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R ++ +  R+LDLGTGTG + + +  ++      G++I  ++ ++A  + 
Sbjct: 31  MDAVLLSGFARAKRGE--RVLDLGTGTGIIPILMAAKTDGEHFTGLEIQEESADMAARSV 88

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV---IVDCLGLEVRDFDPRI 194
             NG+ ++ D +  D   +        FDV+ +NPPY+          +   +   +   
Sbjct: 89  ACNGLQQKIDIVNGDIKEASGIFGAASFDVVTTNPPYMTDTHGLKNPDMPKAIARHEVLC 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +LD           +    ++ L   G   +                R   LV  F+
Sbjct: 149 TLD----------DVVREGAKVLKPGGRFYMVH--------------RPFRLVEIFQ 181


>gi|116871639|ref|YP_848420.1| hypothetical protein lwe0219 [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740517|emb|CAK19637.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 201

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 61/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + KE P  +   VD++ +ALE+AK NA  N +S      +
Sbjct: 57  EEKSGKILDVGCGYGPMGLTVAKEFPESQIEMVDVNLRALELAKENAELNKISNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTATDYQAIISNPPIRA-------------------------GKKVVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL K+G   + I   Q      +  E      V    KD
Sbjct: 151 FAHLRKNGELWIVIQKKQGGPSAEKKMEEV-FGNVETVTKD 190


>gi|254362226|ref|ZP_04978341.1| possible methyltransferase [Mannheimia haemolytica PHL213]
 gi|153093798|gb|EDN74737.1| possible methyltransferase [Mannheimia haemolytica PHL213]
          Length = 235

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 15/157 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +D   ILDLG G+G V L L + +        +++   A + A  NA  +  + R   LQ
Sbjct: 35  KDCQNILDLGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQ 94

Query: 155 SDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI--AD 211
            D    + E  FD+IVSNPPY    +        R  +  ++       +SHY  +    
Sbjct: 95  GDVMQQAFEQKFDLIVSNPPYFADSLA------ARTTERDLAR-----SISHYSHLNWLA 143

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                L ++G  ++ +       +V   E   L+ V 
Sbjct: 144 KAKPWLAENGKITLILPIAAAEKLVDQSEQIGLYCVE 180


>gi|325103137|ref|YP_004272791.1| methyltransferase small [Pedobacter saltans DSM 12145]
 gi|324971985|gb|ADY50969.1| methyltransferase small [Pedobacter saltans DSM 12145]
          Length = 237

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 15/172 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +L  +   +   I D+GTGTG + L L + +   K   +DI  +A++ A  N  
Sbjct: 23  DGVLLGALANVS--NAKHICDIGTGTGVIALMLAQRNKNAKIDALDIDYRAVDTATKNFE 80

Query: 143 TNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            +    R       +    E      +DVIVSNPP+  + +     ++        +L  
Sbjct: 81  NSLFHARLKCYHHSFVEFFEMNPLKKYDVIVSNPPFFLNALKADSEMK--------NLAR 132

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             D +S +  +    + HL   G   + I  +    + ++     L +    
Sbjct: 133 HTD-ISFFLDLLRVAATHLEVRGSIQLIIPLDVSQAIQQLASDYHLSISEVI 183


>gi|95930758|ref|ZP_01313491.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
 gi|95133238|gb|EAT14904.1| methyltransferase small [Desulfuromonas acetoxidans DSM 684]
          Length = 272

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 18/167 (10%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           L  D  + R      +D  L     R  +R+  R++DLG G+  + L L +  P    V 
Sbjct: 30  LGVDIVQHRDGYRFSIDPVLLTDFCRPRQRE--RVVDLGCGSAVMALILARAFPSLSVVA 87

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCL 183
           +++    +  A+ + V NG+  R D  Q+D      +  G FD++V NPP+       C 
Sbjct: 88  LELQAAQVARARKSVVLNGLEGRIDVQQTDVREVPSAWHGDFDLVVCNPPFRPLGQGRCS 147

Query: 184 GLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +   V   +       G  GL        G +  L   G  S+  
Sbjct: 148 QGDERAVSRHE-----VSG--GLD---AFVRGAAVLLKHGGRLSMVH 184


>gi|20806632|ref|NP_621803.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515079|gb|AAM23407.1| SAM-dependent methyltransferases [Thermoanaerobacter tengcongensis
           MB4]
          Length = 251

 Score = 87.5 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +    ++ D  RI+DLG G G + + +  ++      GV+I  + +++A  + 
Sbjct: 32  IDAVLLANFVTAKRGD--RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
             N +  R   +  D     +      FDV+ SNPPY+              +  ++   
Sbjct: 90  AINSLENRIKIIHGDVREVEKLLGYEKFDVVTSNPPYMPLYTGFEKKEEAENIARYE--- 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            + GG               + L   G   +    ++ VDV+       L
Sbjct: 147 -VYGG------LEDFVKAAFKLLKFGGKFFMVHRPDRLVDVMYFLRKYNL 189


>gi|304398628|ref|ZP_07380500.1| methyltransferase small [Pantoea sp. aB]
 gi|304353839|gb|EFM18214.1| methyltransferase small [Pantoea sp. aB]
          Length = 249

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 19/181 (10%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSER 149
                  V RILD+G+G+G + L L + +P   +   V++  +A   A+ N   +   ER
Sbjct: 42  SWAPVAGVRRILDIGSGSGLIALMLAQRTPSPVEIDAVELEPEAAGQAQENVQQSPWPER 101

Query: 150 FDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               Q D   W    +  + +IVSNPPY    +        RD     +       L H 
Sbjct: 102 IRVHQQDIAGWAEQCDKRYSLIVSNPPYFAPGVACSTA--ARDSARSTA------SLDH- 152

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLL 261
           +T+    +  + ++G+  V +        + + ++    L     D   Y      RV+L
Sbjct: 153 QTLLRSAALLIEEEGMFCVVLPSASGQAFIDLAKADGWHL-RFRLDVAEYAHRPPHRVVL 211

Query: 262 F 262
            
Sbjct: 212 A 212


>gi|1045230|emb|CAA63163.1| N-methyl-transferase [Streptomyces alboniger]
          Length = 228

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 58/168 (34%), Gaps = 21/168 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               TL    F   P T     +A       +        L++G GTG + +        
Sbjct: 31  GREWTLHRGVF---PGTLT---AATEVMASIVPYPKGGSFLEVGCGTGVISVTAALHGSD 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPP--YIES 177
                +DI+ KA+    +NA  +GV +R   L SD ++++E    FD I  N P  Y+E 
Sbjct: 85  --VTALDINEKAVANTLANAERHGVEDRVRVLHSDLYAALEPTDRFDAIFWNVPWTYVED 142

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  L    FDP         G         G   HL   G   +
Sbjct: 143 GFPLSSDLHSAVFDP---------GYQGQSRFISGARDHLADGGRLLI 181


>gi|242129429|gb|ACS83764.1| N-methyl transferase [Nonomuraea sp. WU8817]
          Length = 372

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 25/169 (14%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +  R   S   +    ++  LV   +               LDL  G G   L    
Sbjct: 114 QWLWCQRPHPSPTMY-FGDDSLALVHRMVTHRGGHT--------LDLCAGPGVQALTASL 164

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
            S   +   V+I+  A  + ++N   NG+ +R +    D + +V G +FD IVSNPP + 
Sbjct: 165 RSD--RVTAVEINPVAAALCRTNIAMNGLGDRMEVRLGDLYGAVPGEVFDDIVSNPPLLP 222

Query: 177 SVIVDCLGLEVRDFDPRISL--DGGIDGLSHYRTIADGVSRHLNKDGLC 223
                 +  +V     + +   DGG DG     TI DG+  HL+  G C
Sbjct: 223 ------VPEDV-----QFAFVGDGGRDGFDISWTILDGLPEHLSDRGAC 260


>gi|256841493|ref|ZP_05547000.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737336|gb|EEU50663.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 237

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q+    
Sbjct: 40  RILDVGTGTGLIALMLAQRS-TAILDAIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 98

Query: 160 SVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +      +D+IVSNPPY     +D L    +  D + +L    D LS    +     + 
Sbjct: 99  YMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD-LLRDSRKL 149

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L  +G  ++ + ++Q+  ++ +     L
Sbjct: 150 LAAEGNIALVLPFDQRESLIDLAREESL 177


>gi|262831280|sp|A9MGW2|TRMN6_SALAR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++  +A   A+ N   +  + R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   S    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFLCVVLPEQIGNAFTQQALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|110834309|ref|YP_693168.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax
           borkumensis SK2]
 gi|110647420|emb|CAL16896.1| ribosomal ribonucleate guanine-2-methyltransferase [Alcanivorax
           borkumensis SK2]
          Length = 416

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 29/170 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPF 121
           RLT+ +  F  +      +D    F L  + +      ++ DLG G G + +A+LK +P 
Sbjct: 234 RLTVHAGVFAQQQ-----LDIGARFFLDHLPEALHTGAKVADLGCGNGVIGMAVLKANPA 288

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D S  ALE A+ N               D  + +E  FD I+ NPP+       
Sbjct: 289 ARVTFCDESWLALESARDNVSRYFSDAESHFHLGDGLAGLEQRFDCILLNPPFH------ 342

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                          DG + G    R + +  +  L   G   V IG   
Sbjct: 343 ---------------DGYVVGDHVARRLFNQAATALVPGGELRV-IGNRH 376


>gi|1303810|dbj|BAA12466.1| YqeT [Bacillus subtilis]
 gi|1890059|dbj|BAA12078.1| YqeT [Bacillus subtilis]
          Length = 311

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 71/219 (32%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQAHER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A             D+   A+E A+ N   N VS+     
Sbjct: 172 FVQKGDKVIDVGTGSGILSIA-AAMLEAESVHAYDLDPVAVESARLNLKLNKVSDIAQVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGIEGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            R L + G       IG+ ++V V    E     +V   
Sbjct: 262 YRLLKEGGHFITSGIIGHKKQV-VKEALEQAGFTIVEIL 299


>gi|307251172|ref|ZP_07533094.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306856838|gb|EFM88972.1| tRNA (adenine-N(6)-)-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 236

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +    +   +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVVIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIA 210
            D         FD+IVSNPPY    +        R ++  ++       +D L       
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPYFSESLAS------RSYERDLARAATQSHLDWLL------ 144

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               + L + G  S  + +     +V    +  LF     K
Sbjct: 145 -QAKKWLAEQGEISFILPFEAAEKLVEQSRTSGLFCTKICK 184


>gi|254479291|ref|ZP_05092632.1| Methyltransferase small domain superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214034766|gb|EEB75499.1| Methyltransferase small domain superfamily protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 241

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +     + D  RI+DLG G G + + +  ++      GV+I  + +++A  + 
Sbjct: 22  IDAVLLANFVTARRGD--RIVDLGCGNGIIPILIAAKTKDTFIYGVEIQEEMVDMAIRSV 79

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
             N +  R   +  D     +      FDV+ SNPPY+              +  ++   
Sbjct: 80  AINSLENRIKIIHGDVREVEKLLGYEKFDVVTSNPPYMPLYTGFEKKEEAENIARYE--- 136

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            + GG               + L   G   +    ++ VDV+       L
Sbjct: 137 -VYGG------LEDFVKAAFKLLKFGGKFFMVHRPDRLVDVMYFLRKYNL 179


>gi|73663523|ref|YP_302304.1| hypothetical protein SSP2214 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72496038|dbj|BAE19359.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 202

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 36/195 (18%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++ L   S  F        ++LLV       L         +I+D+G G G + L + K
Sbjct: 25  HDLELITDSGVFSKGKIDFGSDLLV----TTFLKAYPPGPTKKIIDVGCGYGPIGLMIAK 80

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
            SP  +   VDI+ +AL +++ N   N + +  + ++S+  S VE   +D +++NPP   
Sbjct: 81  VSPHHEVTMVDINQRALSLSRKNKKRNRI-DNAEIIESNGLSQVEDNTYDFVLTNPPIRA 139

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDV 235
                                    G     +I +     L + G   V I   Q     
Sbjct: 140 -------------------------GKQVVHSILEDAFNKLKQGGALYVVIQKKQGMPSA 174

Query: 236 VRIFESRKLFLVNAF 250
            +  +      V   
Sbjct: 175 KKKMQET-FDNVEVL 188


>gi|86141701|ref|ZP_01060225.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831264|gb|EAQ49720.1| hypothetical protein MED217_01180 [Leeuwenhoekiella blandensis
           MED217]
          Length = 222

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 17/157 (10%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   ILD+GTGTG + L L +         +++   A E A  N   +   +R     +
Sbjct: 18  QNPFSILDIGTGTGVIALMLAQRCDAELVDALELDEDAYEQAVDNFEASPWGDRLFCYHA 77

Query: 156 DWFS---SVEGLFDVIVSNPPYI----ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             +     +E  +D+I  NPP+               E   F+  +           +  
Sbjct: 78  HLYEFATEIEDTYDLITCNPPFFEGNAPQAEQQGSAREQARFEESM----------PFEL 127

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +   V++ LN DG+ SV I YN++ + + +     LF
Sbjct: 128 LVASVNQLLNPDGIFSVVIPYNREQEFIDLAARGNLF 164


>gi|257465571|ref|ZP_05629942.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           202]
 gi|257451231|gb|EEV25274.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           202]
          Length = 328

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +    + +      F     +  L D      L    K D ++  +LDLG G G + 
Sbjct: 149 WKSYRLNELEIFALPAVFS----SSEL-DGGTKLLLSTFHKADGLKGNVLDLGCGAGVIG 203

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            +L K  P  K    DI   AL  ++     N +  +   + SD FS ++G FD+I+SNP
Sbjct: 204 ASLKKMFPKIKLTMSDIHAMALASSERTLAENQLEGKV--VASDVFSHIDGRFDLIISNP 261

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + +                             ++      HL K G  
Sbjct: 262 PFHDGIDTA---------------------YRAVESLILQAKNHLTKGGEL 291


>gi|295402000|ref|ZP_06811962.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109181|ref|YP_003987497.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
 gi|294976002|gb|EFG51618.1| putative RNA methylase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214282|gb|ADP72886.1| methyltransferase small [Geobacillus sp. Y4.1MC1]
          Length = 249

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 82/218 (37%), Gaps = 30/218 (13%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L       +R+  S   F    +  LL   A       +       I+DL TG 
Sbjct: 8   ERLDYLLHE----EIRIIQSPSVFAFSLDAVLLAKFAYMPIQKGL-------IVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L LL      K +GV+I  +  ++AK +   NG+ ++ + +  D   + +      
Sbjct: 57  GVIPL-LLSMRTKGKIIGVEIQERLCDMAKRSVKYNGLEKQIEIIHGDIKDAPKQLGYSK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY---RTIADGVSRHLNKDG 221
           +DV+  NPPY  ++  + +   V      +++         Y     +    S+ L + G
Sbjct: 116 YDVVTCNPPYFPTISKEEMNKNV-----HLAIARHE----IYCTLEDVVRVSSQLLKQGG 166

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY--GGND 257
             +      + +D++ +    +L        Y   G +
Sbjct: 167 KAAFVHRPGRLLDIITLMREYRLEPKRLRFVYPKAGKE 204


>gi|169832916|ref|YP_001694296.1| methyltransferase small subunit [Streptococcus pneumoniae
           Hungary19A-6]
 gi|168995418|gb|ACA36030.1| methyltransferase small domain superfamily [Streptococcus
           pneumoniae Hungary19A-6]
 gi|327390192|gb|EGE88535.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA04375]
          Length = 193

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 79/210 (37%), Gaps = 49/210 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG +    +     +  F     ++ +VD      L  ++      +LD+G G G + L
Sbjct: 20  LLGQK----MTFLTDAGVF-----SKKMVDFGSQLLLKCLDVNQGETVLDVGCGYGPLGL 70

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L+K     +   VDI+ +AL++A+ NA  N    +    QS+ ++ V+G FD ++SNPP
Sbjct: 71  SLVKVY-GVQATMVDINTRALDLAQRNAEKNNA--KATIFQSNIYARVQGRFDHVISNPP 127

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G      I +     L   G  ++ I   Q  
Sbjct: 128 IRA-------------------------GKQVVHEIIEKSKDFLEIGGDLTIVIQKKQGA 162

Query: 233 -------VDV---VRIFES-RKLFLVNAFK 251
                   DV     I +  +  +++ + K
Sbjct: 163 PSAKSKMEDVFGNCEILKKDKGYYILRSVK 192


>gi|77458323|ref|YP_347828.1| methyltransferase small [Pseudomonas fluorescens Pf0-1]
 gi|77382326|gb|ABA73839.1| Putative methyltransferase, small [Pseudomonas fluorescens Pf0-1]
          Length = 317

 Score = 87.1 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 79/224 (35%), Gaps = 24/224 (10%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRL----- 65
           L  V G S      +P  +  D QR      ++         R+  W    ++       
Sbjct: 51  LRDVFGWSRPF---EPGLLSADEQRQLQEAQVIDEFDGRLKSRV-RWSTLDDLLFVHSGF 106

Query: 66  -TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            T ++D+    P+T        +          + R +D+G G G   + + +     + 
Sbjct: 107 PTEAADSVFFGPDTYRFAQLIHSHLQQNFA--PIHRAVDIGCGAGVGAILIGRARREAQV 164

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           + VDI+  AL +   NA    V+   +   SD    V+G FD+IV+NPPY+     D  G
Sbjct: 165 LAVDINPAALRLTTINAALAEVA-NVEVRASDVLQGVDGEFDLIVANPPYMA----DPAG 219

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              R         GG  G      I +     L   G   +  G
Sbjct: 220 RAYRH-------GGGTLGAGLSLRIVEQALNRLTLGGSLVLYTG 256


>gi|260771799|ref|ZP_05880717.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14]
 gi|260613091|gb|EEX38292.1| predicted O-methyltransferase [Vibrio metschnikovii CIP 69.14]
          Length = 240

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 10/157 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+G GTG + L   +     +   VDI  +A   A +N   +  S R + +  
Sbjct: 41  RPPDRLLDIGCGTGLLSLMCAQRFTHSQICAVDIDQQAFLAASNNIRRSVWSSRIEVMHG 100

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  +      FD I+ NPPY  S                 ++    + LSH + + D  +
Sbjct: 101 DINTLRFTQPFDAIICNPPYFNSGQPAQQQT--------RAIARHTETLSH-QQLLDCFA 151

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +HL   G  S+ +   +    +   + +  +L    +
Sbjct: 152 QHLPPQGTASLILPQQEGQIFIDQAQQQGWYLTRLCQ 188


>gi|320546792|ref|ZP_08041101.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
 gi|320448564|gb|EFW89298.1| methyltransferase domain protein [Streptococcus equinus ATCC 9812]
          Length = 196

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 76/199 (38%), Gaps = 34/199 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            D + +++TL   +F    ++ +    +VD      L  +E      +LDLG G G + +
Sbjct: 14  HDIHELKVTLLGQSFTFLTDSGVFSKKMVDYGSQVLLNSLEFNQGETLLDLGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           +L K     K   VDI+ +A+++AK NA  NGV    D  QS+ +  V G F+ ++SNPP
Sbjct: 74  SLAK-VQGIKPTMVDINNRAIDLAKQNANKNGVGA--DIYQSNIYEKVIGTFNHVISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK- 232
                                       G     TI      +LN  G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVYTIISESINYLNDGGDLTIVIQKKQGA 165

Query: 233 VDVVRIFESRKLFLVNAFK 251
                  E      V   K
Sbjct: 166 PSAKAKMEEI-FGNVEILK 183


>gi|318079764|ref|ZP_07987096.1| methyltransferase [Streptomyces sp. SA3_actF]
          Length = 115

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 10/120 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+ +T LL     A +L          +LDL TG+G   LALL      +    D+S 
Sbjct: 2   YAPQADTHLL-----ARALGTEPIGPHTHVLDLCTGSG--ALALLAARRGARVCATDLSW 54

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A+  A+ NA   G  +R   L+ D    V G  FD++VSNPPY+            R  
Sbjct: 55  RAVVSARINAARAG--QRVRVLRGDLSGPVRGQRFDLVVSNPPYVPDPAARTGPRRGRSH 112


>gi|326426927|gb|EGD72497.1| hypothetical protein PTSG_00524 [Salpingoeca sp. ATCC 50818]
          Length = 216

 Score = 87.1 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 18/166 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-------KESPFF 122
             +EP  +T LL+D  L   L  I        +++G+G+G    +L        K     
Sbjct: 13  SVYEPAEDTFLLID-GLEADLKNILAIKPQLCVEIGSGSGVPITSLACFLKDSSKYMQVV 71

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVI 179
             V VDI+  A+   +     NG+    + LQ D    +       D+++ NPPY+ +  
Sbjct: 72  VCVAVDINPDAVMCTQDTFQRNGIEA--ECLQGDLLQPLIDRSIKADILIFNPPYVVTPS 129

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     +       +  GG DG          V   L   G+  +
Sbjct: 130 EEVGQEGLMA-----AWAGGADGREVIDRFLPQVPAVLTDSGILYM 170


>gi|255025584|ref|ZP_05297570.1| hypothetical protein LmonocytFSL_03220 [Listeria monocytogenes FSL
           J2-003]
          Length = 201

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL ++G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLRENGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|332524054|ref|ZP_08400306.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315318|gb|EGJ28303.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 196

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 72/198 (36%), Gaps = 37/198 (18%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG ++F        S  F     ++ ++D      L  +       +LD+G G G + +
Sbjct: 23  LLG-QEF---TFFSDSGVF-----SKKMIDFGSQVLLNSLSFGTGESLLDVGCGYGPLGI 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           AL K +       +DI+ +A+E+AK NA  N V       QS+ + +V G FD I+SNPP
Sbjct: 74  ALAK-TQGVSATLIDINNRAIELAKKNATYNEVE--VTIYQSNIYENVTGQFDHIISNPP 130

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G      I +     L+ +G  ++ I   Q  
Sbjct: 131 IRA-------------------------GKKVVHEIIEKAFDFLHSNGDLTIVIQKKQGA 165

Query: 234 DVVRIFESRKLFLVNAFK 251
              +         V   K
Sbjct: 166 PSAKEKMELIFGNVEIVK 183


>gi|156380522|ref|XP_001631817.1| predicted protein [Nematostella vectensis]
 gi|156218864|gb|EDO39754.1| predicted protein [Nematostella vectensis]
          Length = 215

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 10/197 (5%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVDI 129
            +EP  ++ L++D AL      + +      +++G+G+G +   L     P    +  DI
Sbjct: 19  VYEPAEDSFLMMD-ALEKDAQLLHEISPSVCVEVGSGSGVLITFLASITGPHSLYIATDI 77

Query: 130 SCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           + KA       A  NG +       L S  +S ++G  DV++ NPPY+ +        EV
Sbjct: 78  NAKAALCTTRTAKQNGCTVSAVVTDLLSSMYSRLKGKIDVLLFNPPYVATP-----TDEV 132

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLFL 246
                + S  GGI+G      +   VS  L+  G   +  +  N+  D++   E   L  
Sbjct: 133 ASEGIQASWAGGINGRQVTDRLLPVVSSLLSPKGCFYLVAVAENKPDDIICFLEKYGLHG 192

Query: 247 VNAFKDYGGNDRVLLFC 263
               +   G +R+ +  
Sbjct: 193 ETVLQRKAGCERLSILR 209


>gi|333030549|ref|ZP_08458610.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
           18011]
 gi|332741146|gb|EGJ71628.1| tRNA (adenine-N(6)-)-methyltransferase [Bacteroides coprosuis DSM
           18011]
          Length = 235

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 12/148 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FS 159
           ILD+GTGTG + L L + +   +   ++I   A+  AK N   +   +R + +QSD+   
Sbjct: 41  ILDVGTGTGLIALMLAQRTVSAQIKALEIDEDAVIQAKENIERSPWKDRIEVIQSDFNLY 100

Query: 160 SVEGLFDVIVSNPPYIESVIVDCL-GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
                +D+IVSNPPY    ++              +S D           + DGV R L+
Sbjct: 101 EPNEKYDLIVSNPPYFVDSLLSPHKQRTNARHTQTLSFDA----------LLDGVVRCLS 150

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             G  SV +    +     + + R LFL
Sbjct: 151 AVGRFSVILPIEVQDLFCGLAKDRGLFL 178


>gi|330945099|gb|EGH46833.1| hypothetical protein PSYPI_32873 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 220

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 73/180 (40%), Gaps = 23/180 (12%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVR---- 64
           L  V G S     + P+S+L   +   L  A  + R         +     F ++     
Sbjct: 48  LRDVFGWSR----LIPESMLPVEEAQGLLAAGILERKEDG-----LKSRVRFSSLDDLLL 98

Query: 65  -----LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
                 T   D+    P+T     S       +     + R +D+G GTGA  + +    
Sbjct: 99  VHSAFPTADEDSVFFGPDTYRFAQSINRHL--QGTSHPINRAVDIGCGTGAGAMLIAVAR 156

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY++   
Sbjct: 157 PQAQVHAVDINPKALHFAQTNAAVAGLK-NMECCHSDILSGLSGNFDLIVANPPYMKDTQ 215


>gi|169351743|ref|ZP_02868681.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
 gi|169291965|gb|EDS74098.1| hypothetical protein CLOSPI_02524 [Clostridium spiroforme DSM 1552]
          Length = 197

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 36/205 (17%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTG 107
           E    I  +R    +     +  F     ++ ++D      L  I      + +LD+G G
Sbjct: 14  EPEQFIFNYRGK-TLTFVSDNGVF-----SKKMIDYGSRVLLETISIDSSKKTLLDVGCG 67

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G   +AL    PF +   +DI+ +AL +A+ N   N V+       S+ +  VE  +D+
Sbjct: 68  YGTFGIALKSVYPFLEIDMIDINDRALNLARENLKLNNVNANV--YLSNTYEKVENKYDL 125

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+NPP                            G      I     ++LN +G   + I
Sbjct: 126 IVTNPPIRA-------------------------GKEIVTKILVDSKKYLNLNGEIWIVI 160

Query: 228 GYNQK-VDVVRIFESRKLFLVNAFK 251
              Q      +  ES     V+  K
Sbjct: 161 QKKQGAPSAKKNLESV-FKKVDIVK 184


>gi|327313660|ref|YP_004329097.1| methyltransferase domain-containing protein [Prevotella denticola
           F0289]
 gi|326945039|gb|AEA20924.1| methyltransferase domain protein [Prevotella denticola F0289]
          Length = 232

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 60/149 (40%), Gaps = 12/149 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L + +  P      V++   A+  A  N V +   +R + + +   D+
Sbjct: 36  ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  ++ IV NPPY  + +   L           S     D LS  + +A    R L
Sbjct: 96  HPQNGCRYEAIVCNPPYFINSLKSPLQQ--------RSTARHADTLSC-QELARHAERLL 146

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++G  SV I    K  +        L +
Sbjct: 147 KENGKLSVIIPAENKETLESEALFCGLSI 175


>gi|300933020|ref|ZP_07148276.1| putative transferase [Corynebacterium resistens DSM 45100]
          Length = 534

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 20/152 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK--SNAVT 143
           L+ +       +V  ILDLG G+G + L L   SP  +  G DIS +AL  A+       
Sbjct: 157 LSAAAQEQAPAEVTEILDLGCGSGVLSLLLESNSPSVRVTGTDISQRALAFARLGRAGTA 216

Query: 144 NGVS-ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF----DPRISLD 197
            GV     + L   WF  V G  FDVIVSNPP++ +          R+     D   +L 
Sbjct: 217 RGVEPNNVEWLHGSWFEPVRGRTFDVIVSNPPFVMAPPARDEAKTYRESGLELDSASALV 276

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
            G              + +L   G   +  G+
Sbjct: 277 VGE------------AATYLRPRGRAHLLAGW 296


>gi|221310470|ref|ZP_03592317.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314793|ref|ZP_03596598.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319716|ref|ZP_03601010.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323993|ref|ZP_03605287.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767585|ref|NP_390423.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|321312029|ref|YP_004204316.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5]
 gi|251757309|sp|P54460|PRMA_BACSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225185213|emb|CAB14487.2| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320018303|gb|ADV93289.1| ribosomal protein L11 methyltransferase [Bacillus subtilis BSn5]
          Length = 311

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 69/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A             D+   A+E A+ N   N VS+     
Sbjct: 172 FVQKGDKVIDVGTGSGILSIA-AAMLEAESVHAYDLDPVAVESARLNLKLNKVSDIAQVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGIEGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L + G       IG+  K +V    E     +V   
Sbjct: 262 YSLLKEGGHFITSGIIGHK-KQEVKEALEQAGFTIVEIL 299


>gi|158321689|ref|YP_001514196.1| methyltransferase small [Alkaliphilus oremlandii OhILAs]
 gi|158141888|gb|ABW20200.1| methyltransferase small [Alkaliphilus oremlandii OhILAs]
          Length = 255

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K    +++DLGTGTG + + L  +S       ++I  +  ++A+ + 
Sbjct: 32  IDAVLLANFVTLKKN--AKVVDLGTGTGIIPILLAGKSQTSHITALEIQKEVADMAQRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLG--LEVRDFDPRIS 195
             N +++R   L  D   + + L    +DV+ SNPPY+    +  +     +   + + +
Sbjct: 90  QLNHLADRIHVLNMDLKDAEKNLDVNGYDVVTSNPPYMHPEGLLNIEDKKAISRHEVKCT 149

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           L            +    SR L  +G   +  
Sbjct: 150 L----------EDVIRTASRLLKHNGKFFMVH 171


>gi|148228906|ref|NP_001089552.1| N-6 adenine-specific DNA methyltransferase 1 (putative) [Xenopus
           laevis]
 gi|66911094|gb|AAH97870.1| MGC115637 protein [Xenopus laevis]
          Length = 215

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 11/193 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           +D ++P  ++ LL+D AL      + K  V   L++G G+G V   +          +  
Sbjct: 16  ADVYDPAEDSFLLLD-ALEKDAEEL-KSSVEICLEVGCGSGVVSAFIASVIGQKAWYLCT 73

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ KA       A  N +        L       ++G  D++V NPPY+ +        
Sbjct: 74  DINPKAAYCTLETAKANQLHIEPIITDLVKGLLPRLQGQIDLLVFNPPYVVTP-----PE 128

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKL 244
           EV       +  GG +G          VS+ L+  G+  + +   N   +++    +  L
Sbjct: 129 EVGSHGIEAAWAGGKNGREVMDRFFPFVSKLLSPTGIFYLIVLKDNNPDEILENMRTEGL 188

Query: 245 FLVNAFKDYGGND 257
                     G +
Sbjct: 189 IGSKVLCRQAGRE 201


>gi|242372759|ref|ZP_04818333.1| 16S rRNA methyltransferase [Staphylococcus epidermidis M23864:W1]
 gi|242349532|gb|EES41133.1| 16S rRNA methyltransferase [Staphylococcus epidermidis M23864:W1]
          Length = 208

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 68/193 (35%), Gaps = 36/193 (18%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  T  +  F        ++LL+ + L    P         I D+G G G + L + K S
Sbjct: 33  LEFTTDAGVFSKDKVDFGSDLLIQTFLKEHPP----GPSKHIADVGCGYGPIGLTIAKIS 88

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
           P  +   +D++ +AL +A+ N   N + E  + ++SD  S+V+   FD +++NPP     
Sbjct: 89  PHHQLSLLDVNNRALALAEINKTKNQI-ENAEIIESDCLSAVDNQRFDYVLTNPPIRA-- 145

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I +     L   G   V I   Q      +
Sbjct: 146 -----------------------GKDIVHRIFEEAYEKLKAQGELYVVIQKKQGMPSAKK 182

Query: 238 IFESRKLFLVNAF 250
             E+     V   
Sbjct: 183 KMEAL-FNNVEVV 194


>gi|312602239|ref|YP_004022084.1| methyltransferase [Burkholderia rhizoxinica HKI 454]
 gi|312169553|emb|CBW76565.1| Methyltransferase [Burkholderia rhizoxinica HKI 454]
          Length = 365

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 17/169 (10%)

Query: 64  RLTLSSDTFE-PRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + + +D F  P  +  L +  +          E  +   +LD+G G+G + +  L    
Sbjct: 103 PIKVVTDAFHYPHADQVLPIQPEQLFFMDYTSAEDLEQASVLDIGVGSGVLSIFCLLNGA 162

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIE 176
                G+D++ +A  +A  NA+ N + + FD      SD F+SV +  FD I SNPP+  
Sbjct: 163 TSCV-GLDVNPRAKILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEP 221

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     +   V           GI G+     I   + +HL  DG+  V
Sbjct: 222 T--PPGIDYYVNS-------AAGIYGMDFAEKILSNIDQHLTDDGMLQV 261


>gi|37527224|ref|NP_930568.1| hypothetical protein plu3348 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81833921|sp|Q7N1W7|TRMN6_PHOLL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|36786658|emb|CAE15722.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 244

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                D   ILD+G G+G + L L + +    K   V++  +A   A+ NA  +    + 
Sbjct: 38  WTPVSDKKAILDIGCGSGLIALMLAQRTDENTKIDAVELDTEAALQAQDNAEQSPWQRKI 97

Query: 151 DTLQ---SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           D  Q    D+       +D+IVSNPPY   +V       E   +           G   +
Sbjct: 98  DVYQQDIGDFAEQYSQCYDLIVSNPPYFEPAVACRNEAREQARY----------TGSMTH 147

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGND--RVLL 261
           + +       +  DGL  V + Y    +   +   +  F    VN  +D  G    R+LL
Sbjct: 148 QQLLQYAETLITADGLFCVVLPYAIGEEFETMACHQGWFSHHRVNI-RDRQGKPLHRMLL 206

Query: 262 F 262
            
Sbjct: 207 A 207


>gi|262383338|ref|ZP_06076474.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|301309389|ref|ZP_07215331.1| methyltransferase domain protein [Bacteroides sp. 20_3]
 gi|262294236|gb|EEY82168.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|300832478|gb|EFK63106.1| methyltransferase domain protein [Bacteroides sp. 20_3]
          Length = 258

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 13/148 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R    Q+    
Sbjct: 61  RILDVGTGTGLIALMLAQRS-TAILDAIDIDSDACLQARENIAKSPFANRIQVYQTSLSE 119

Query: 160 SVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +      +D+IVSNPPY     +D L    +  D + +L    D LS    +     + 
Sbjct: 120 YMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD-LLRDSRKL 170

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L  +G  ++ + ++Q+  ++ +     L
Sbjct: 171 LAAEGNIALVLPFDQRESLIDLAREESL 198


>gi|125974592|ref|YP_001038502.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
 gi|125714817|gb|ABN53309.1| methyltransferase small [Clostridium thermocellum ATCC 27405]
          Length = 251

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 19/167 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +   I+K D   ++DLGTGTG + + +  ++     +G++I  +  E+A+ +  
Sbjct: 33  DAVLLANFADIKKGDT--VIDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSVK 90

Query: 143 TNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVR---DFDPRIS 195
            N + +R   +  D  +SVE      FDV+V+NPPY+          + +     + + +
Sbjct: 91  LNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYMNQGGGLLNISDTKAISRHEIKCT 150

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L            +    S+ L   G  ++    ++ VD++ +    
Sbjct: 151 L----------EDVIKASSKLLVPGGQFAMVHRPDRLVDIIWLMRKY 187


>gi|313206496|ref|YP_004045673.1| methyltransferase type 12 [Riemerella anatipestifer DSM 15868]
 gi|312445812|gb|ADQ82167.1| Methyltransferase type 12 [Riemerella anatipestifer DSM 15868]
 gi|315023563|gb|EFT36567.1| Methyltransferase [Riemerella anatipestifer RA-YM]
 gi|325336058|gb|ADZ12332.1| Predicted O-methyltransferase [Riemerella anatipestifer RA-GD]
          Length = 235

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 23/194 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + F     ++  +T   R  T    D+ L  +L  ++  ++   L++G GTG + L + +
Sbjct: 6   KPFRFKNFSIKQNTSVFRVGT----DAVLLGALATVD--NIKTALEVGCGTGIISLMIAQ 59

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE 176
            +P    + +DI   A  +A+ N   +   ER  ++  ++        FD+I SNPPY E
Sbjct: 60  RNPNCSIIAIDIDENASNLAQENFDNSVYQERLKSININFMEYQPNQKFDLIFSNPPYFE 119

Query: 177 --SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +   D +  +      R++LD        +  +    S+ L+K+G+ +V I    +  
Sbjct: 120 TNTSDKDKIARQ------RLTLD--------FEDLIRKSSQLLSKEGIFAVIIPSEYEGL 165

Query: 235 VVRIFESRKLFLVN 248
            +   ++  LFL  
Sbjct: 166 FIETCKTHSLFLQR 179


>gi|261417528|ref|YP_003251210.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|297528403|ref|YP_003669678.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|319765185|ref|YP_004130686.1| methyltransferase small [Geobacillus sp. Y412MC52]
 gi|261373985|gb|ACX76728.1| methyltransferase small [Geobacillus sp. Y412MC61]
 gi|297251655|gb|ADI25101.1| methyltransferase small [Geobacillus sp. C56-T3]
 gi|317110051|gb|ADU92543.1| methyltransferase small [Geobacillus sp. Y412MC52]
          Length = 249

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+  S   F    +  LL   A              +I+DL TG G + L LL      
Sbjct: 18  LRIIQSPSVFSFSLDAVLLAHFAYMPI-------QKGQIVDLCTGNGVIPL-LLSRRTKG 69

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178
             +G++I  +  ++A+ +   NG+  + + +  D   + +      +DV+  NPPY  +V
Sbjct: 70  TIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDIKEAPQRIGYSRYDVVTCNPPYFPAV 129

Query: 179 IVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             D L       +   +   +L            +    S+ L + G  +      + +D
Sbjct: 130 GKDELSKNEHIAIARHEIYCTL----------EDVIRVSSQLLKQGGKAAFVHRPGRLLD 179

Query: 235 VVRIFESRKL 244
           +V +    +L
Sbjct: 180 LVTLMRQYRL 189


>gi|56418563|ref|YP_145881.1| hypothetical protein GK0028 [Geobacillus kaustophilus HTA426]
 gi|56378405|dbj|BAD74313.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 248

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+  S   F    +  LL   A              +I+DL TG G + L LL      
Sbjct: 17  LRIIQSPSVFSFSLDAVLLAHFAYMPI-------QKGQIVDLCTGNGVIPL-LLSRRTKG 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178
             +G++I  +  ++A+ +   NG+  + + +  D   + +      +DV+  NPPY  +V
Sbjct: 69  TIIGIEIQERLCDMARRSVQYNGLEGQIEIIHGDIKEAPQRIGYSRYDVVTCNPPYFPAV 128

Query: 179 IVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             D L       +   +   +L            +    S+ L + G  +      + +D
Sbjct: 129 GKDELSKNEHIAIARHEIYCTL----------EDVIRVSSQLLKQGGKAAFVHRPGRLLD 178

Query: 235 VVRIFESRKL 244
           +V +    +L
Sbjct: 179 LVTLMRQYRL 188


>gi|262282350|ref|ZP_06060118.1| methyltransferase domain-containing protein [Streptococcus sp.
           2_1_36FAA]
 gi|262261641|gb|EEY80339.1| methyltransferase domain-containing protein [Streptococcus sp.
           2_1_36FAA]
          Length = 197

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 70/190 (36%), Gaps = 35/190 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ ++D      L  I+      ILDLG G G + L L+K S   
Sbjct: 28  MTFLTDAGVF-----SKKMIDYGSQVLLSTIDFSIGDTILDLGCGYGPLGLTLVK-SQAV 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   VDI+ +AL++A+ NA  NGVS   +  QS+ +  V G+FD I+SNPP         
Sbjct: 82  KATLVDINLRALDLARKNAELNGVSA--EIFQSNIYDQVTGVFDHIISNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFES 241
                              G      +  G   HL   G  ++ I   Q         E 
Sbjct: 134 -------------------GKQVVHQVIAGSLEHLTLGGDLTIVIQKKQGAPSAKAKMEE 174

Query: 242 RKLFLVNAFK 251
                    K
Sbjct: 175 V-FGNCEVVK 183


>gi|257469152|ref|ZP_05633246.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317063399|ref|ZP_07927884.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313689075|gb|EFS25910.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 244

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 85/190 (44%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++   +D F    ++ L+ + A          +++  I+DLGTG GA+ L L K++  
Sbjct: 16  DMKIIQRTDHFAFSLDSLLISEFASIT-------KNINNIVDLGTGNGAIPLFLSKKTK- 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI-- 175
            K  G++I   + ++A+ N   N + ++   +  D  +  +       D++VSNPP+   
Sbjct: 68  AKITGIEIQEISSDLARRNIKLNNLEDQITIINDDMKNWRKYFTTHTLDMVVSNPPFFKF 127

Query: 176 ---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              E ++ D   L +   +  I+LD          T+ +  +  L   G   +    ++ 
Sbjct: 128 NGNEELLNDLTQLTLARHEISITLD----------TLIETAAGLLKDKGYFVLVHRVDRL 177

Query: 233 VDVVRIFESR 242
           ++++ + +  
Sbjct: 178 IEIIELMKKH 187


>gi|326389210|ref|ZP_08210778.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994573|gb|EGD52997.1| RNA methylase [Thermoanaerobacter ethanolicus JW 200]
          Length = 267

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +    +K D  +I+DLG G+G + + +  ++      GV+I     ++A  + 
Sbjct: 48  MDAVLLANFVTAKKGD--KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSV 105

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
           V N + ER   ++ D      + G   FD++ SNPPY+              +  ++   
Sbjct: 106 VINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMPVKTGFDKKQKSENIARYE--- 162

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            + GG              S+ L   G   +  
Sbjct: 163 -IYGG------LEEFIKAASKLLKFGGKFFMIH 188


>gi|315446631|ref|YP_004079510.1| HemK-related methylase [Mycobacterium sp. Spyr1]
 gi|315264934|gb|ADU01676.1| HemK-related putative methylase [Mycobacterium sp. Spyr1]
          Length = 230

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 11/174 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + +F    L +  D + P+ ++ LL+D+ +   +         R+ DL TG+  V     
Sbjct: 5   YTEFDARDLAV--DVYPPQEDSHLLIDAMIEAGVV-----PGARVADLCTGS-GVIAIAA 56

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
             +        DI  KA++  +            D  +  W  +VE   FDV+++NPPY+
Sbjct: 57  AAAGAASVTAFDICPKAVQRTRE--EALAAGVEVDVHRGSWARAVEFRPFDVVLANPPYV 114

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
               +D  GL      P  + D G DG      +       L + G   V    
Sbjct: 115 PEAPMDDSGLISATAGPSRAWDAGPDGRVVLDPMCAAAPLLLAEGGTMLVVHSE 168


>gi|289595708|ref|YP_003482404.1| methylase [Aciduliprofundum boonei T469]
 gi|289533495|gb|ADD07842.1| methylase [Aciduliprofundum boonei T469]
          Length = 177

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 34/194 (17%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + +    +T L++D+           R   ++L++GTG GA+ +   K       + VDI
Sbjct: 2   EVYPVSEDTLLMLDNI----------RCGKKVLEVGTGNGAIAIECAKS--GSSVLAVDI 49

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             +A++  +  A     + + +T  SD F +V+G +D I+ NPPY+     D   L+   
Sbjct: 50  DKEAVKRLREEAKI--KNLKIETKVSDLFENVDGKYDTIIFNPPYLPGNPKDLKDLQWAG 107

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC------------SVEIGYNQKVDVVR 237
                   GG  G        D   ++L  DG                E+ Y  +    +
Sbjct: 108 --------GGKYGDEVILKFLDVAWKYLADDGEIYIILSSFNRLNKIFEMPYKFEKIAQK 159

Query: 238 IFESRKLFLVNAFK 251
            F   +++L  A K
Sbjct: 160 KFSFHEIYLYRAKK 173


>gi|295132390|ref|YP_003583066.1| hypothetical protein ZPR_0512 [Zunongwangia profunda SM-A87]
 gi|294980405|gb|ADF50870.1| protein containing methyltransferase small domain [Zunongwangia
           profunda SM-A87]
          Length = 240

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 14/155 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   ILD+GTGTG + L + + S       ++I   A E A  N   +   +R     +
Sbjct: 37  EDTDSILDVGTGTGVIALMMAQRSSAQLIDAIEIDENAYEQAVENFEHSDWGDRLFCYHA 96

Query: 156 DWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           ++   V     E  +D+I+SNPP+  S        E RD    ++     D L   + + 
Sbjct: 97  EFGEFVEEMQDEEKYDLIISNPPFYNSDYKTA--SEARD----MARF--QDALPF-QLLL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +G +  L++ G  +V I  +Q+ D + +     LF
Sbjct: 148 EGATYLLSEKGRLAVIIPKSQEQDFLELAGDFNLF 182


>gi|134046087|ref|YP_001097573.1| methyltransferase small [Methanococcus maripaludis C5]
 gi|132663712|gb|ABO35358.1| 16S rRNA m(2)G 1207 methyltransferase [Methanococcus maripaludis
           C5]
          Length = 200

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 72/216 (33%), Gaps = 46/216 (21%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +  IL  + F        S  F P+     T +LV+         +E      +LD+G G
Sbjct: 17  VSGILRGKKF---SFKTDSGVFSPKKIDKGTIILVEE--------LELLKSDNVLDVGCG 65

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLF 165
            G + +++  E         D++ +++ + + N   NG SE   +  Q D +  V+   +
Sbjct: 66  YGVIGISIADEVN--SVTMTDVNNRSVSLTRKNVKLNGKSEKNIEVFQGDLYEKVKNKKY 123

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            VI+SNPP                            G      I       LN++G   V
Sbjct: 124 SVIISNPPI-------------------------KAGKELIHKIISKGHELLNENGSIWV 158

Query: 226 EIGYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260
            I        + +  E      V       G  RVL
Sbjct: 159 VIQTKHGAKSLTKYMEEI-YGNVETVT-ISGGYRVL 192


>gi|145221632|ref|YP_001132310.1| putative methylase [Mycobacterium gilvum PYR-GCK]
 gi|145214118|gb|ABP43522.1| putative methylase [Mycobacterium gilvum PYR-GCK]
          Length = 230

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 11/174 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + DF    L +  D + P+ ++ LL+D+ +   +         R+ DL TG+  V     
Sbjct: 5   YTDFDARDLAV--DVYPPQEDSHLLIDAMIEAGVV-----PGARVADLCTGS-GVIAIAA 56

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYI 175
             +        DI  KA++  +            D  +  W  +VE   FDV+++NPPY+
Sbjct: 57  AAAGAASVTAFDICPKAVQRTRE--EALAAGVEVDVHRGSWARAVEFRPFDVVLANPPYV 114

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
               +D  GL      P  + D G DG      +       L + G   V    
Sbjct: 115 PEAPMDDSGLISATAGPSRAWDAGPDGRVVLDPMCAAAPLLLAEGGTMLVVHSE 168


>gi|89100359|ref|ZP_01173224.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911]
 gi|89084980|gb|EAR64116.1| hypothetical protein B14911_01449 [Bacillus sp. NRRL B-14911]
          Length = 200

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/215 (24%), Positives = 81/215 (37%), Gaps = 53/215 (24%)

Query: 57  WRDF----YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + DF    ++ R    +  F  +     + LLV+   AF LP +E      ILD+G G G
Sbjct: 18  YWDFSLRGHSFRFKTDNGVFSKKEVDFGSRLLVE---AFKLPELEGN----ILDVGCGYG 70

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVI 168
            + L++ K  P      VD++ +A+E+AK NA  N VS      +SD  + V  G F  I
Sbjct: 71  PIGLSIAKSFPERTVHMVDVNLRAIELAKENAAGNSVS-NAAIYESDRLTGVGGGKFAAI 129

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           ++NPP                            G      I +    H+   G   V I 
Sbjct: 130 LTNPPIRA-------------------------GKQVVHDIFEQSFEHMLTGGELWVVIQ 164

Query: 229 YNQKV------------DVVRIFESRKLFLVNAFK 251
             Q              DV  + + +  F++ A K
Sbjct: 165 KKQGAPSAIEKLDSLFSDVETVEKKKGYFILKAKK 199


>gi|256004046|ref|ZP_05429031.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|281419117|ref|ZP_06250134.1| Methyltransferase type 11 [Clostridium thermocellum JW20]
 gi|255991969|gb|EEU02066.1| methyltransferase small [Clostridium thermocellum DSM 2360]
 gi|281407266|gb|EFB37527.1| Methyltransferase type 11 [Clostridium thermocellum JW20]
 gi|316941710|gb|ADU75744.1| Methyltransferase type 11 [Clostridium thermocellum DSM 1313]
          Length = 254

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 74/167 (44%), Gaps = 19/167 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +   I+K D   ++DLGTGTG + + +  ++     +G++I  +  E+A+ +  
Sbjct: 36  DAVLLANFADIKKGDT--VIDLGTGTGIIAILIAGKTEAKSIIGLEIQEEMAEMAQRSVK 93

Query: 143 TNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVR---DFDPRIS 195
            N + +R   +  D  +SVE      FDV+V+NPPY+          + +     + + +
Sbjct: 94  LNNLEDRVKIVCGDIKNSVEMFGASKFDVVVTNPPYMNQGGGLLNISDTKAISRHEIKCT 153

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           L            +    S+ L   G  ++    ++ VD++ +    
Sbjct: 154 L----------EDVIKASSKLLVPGGQFAMVHRPDRLVDIIWLMRKY 190


>gi|322369464|ref|ZP_08044029.1| methylase [Haladaptatus paucihalophilus DX253]
 gi|320551196|gb|EFW92845.1| methylase [Haladaptatus paucihalophilus DX253]
          Length = 191

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 22/182 (12%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            ++P  ++ LL + A        E      +L++GTG+G V   + +E+   + VG D++
Sbjct: 14  VYQPAEDSHLLAEVAAE------EIAGDELVLEVGTGSGYVSEYVAEET-GARVVGADVN 66

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             A      NA   G     + +++D  S   +G FD ++ NPPY+ +        E RD
Sbjct: 67  PHACA----NARERG----VEAVRADLVSPFRDGAFDAVLFNPPYLPTD-----PDEERD 113

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVN 248
                +L GG  G        D V R L   G   + +       +VV          V 
Sbjct: 114 DWMERALSGGESGREVIDPFLDAVGRVLAPGGRVFLLVSSLSGVEEVVSRAGENGFSAVA 173

Query: 249 AF 250
             
Sbjct: 174 LR 175


>gi|312602204|ref|YP_004022049.1| hypothetical protein RBRH_00450 [Burkholderia rhizoxinica HKI 454]
 gi|312169518|emb|CBW76530.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 320

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 17/169 (10%)

Query: 64  RLTLSSDTFE-PRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + + +D F  P  +  L +  +          E  +   +LD+G G+G + +  L    
Sbjct: 58  PIKIVTDAFHYPHADQVLPIQPEQLFFMDYTCAEDIEQASVLDIGVGSGVLSIFCLLNGA 117

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIE 176
                G+D++ +A  +A  NA+ N + + FD  +   SD F+SV +  FD I SNPP+  
Sbjct: 118 KSCV-GLDVNPRAKILAGHNAILNHIDKNFDIREGNTSDIFASVKDKQFDFICSNPPFEP 176

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +             +  ++    I G+     I   + +HL  DG   +
Sbjct: 177 TPP---------GIEYYVNSAADIYGMDFVEKILSNIDQHLTDDGTLQL 216


>gi|240948233|ref|ZP_04752619.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           NM305]
 gi|240297272|gb|EER47813.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus minor
           NM305]
          Length = 328

 Score = 86.7 bits (214), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 61/171 (35%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +    + +      F     +  L D      L    K D ++  +LDLG G G + 
Sbjct: 149 WKSYRLNELDIFALPAVFS----SSEL-DGGTKLLLSTFHKADGLKGDVLDLGCGAGVIG 203

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            +L K  P  K    DI   AL  ++     N +  +   + SD FS ++G FD+I+SNP
Sbjct: 204 ASLKKMFPKIKLTMSDIHAMALASSERTLAENQLEGKV--IASDVFSHIDGRFDLIISNP 261

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + +                              +      HL + G  
Sbjct: 262 PFHDGIDTA---------------------YRAVENLILQAKNHLTRGGEL 291


>gi|152986240|ref|YP_001348482.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
 gi|150961398|gb|ABR83423.1| hypothetical protein PSPA7_3123 [Pseudomonas aeruginosa PA7]
          Length = 318

 Score = 86.3 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 72/193 (37%), Gaps = 20/193 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           TL++D     P+T    D  +   L  ++   + R  D+G G G   + +    P  +  
Sbjct: 106 TLAADAVFFGPDTYRF-DRLIRSHLAALDPTGIRRAADIGCGAGPGAIRIALACPDAEVH 164

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+DI+  AL++A+ NA   GV +     +SD      G FD+IV+NPPY+    +D    
Sbjct: 165 GLDINPAALDLARVNAALAGV-DNLTLARSDLLCQAPGRFDLIVANPPYL----LDASER 219

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             R     +              I D     L   G   +  G       V + +    F
Sbjct: 220 AYRHGGGSLG-------AGLSLAIVDAALERLEPGGSLLLYTG-------VAMVDGADPF 265

Query: 246 LVNAFKDYGGNDR 258
           L    +      R
Sbjct: 266 LARVRERLAQRAR 278


>gi|317126847|ref|YP_004093129.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
 gi|315471795|gb|ADU28398.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
          Length = 200

 Score = 86.3 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 72/193 (37%), Gaps = 39/193 (20%)

Query: 64  RLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              +    F        + LL++S   F LP +    V  I+D+G G G + ++L K +P
Sbjct: 29  TFYVDRGIFSKTGLDFGSRLLIES---FELPNV----VGTIVDVGCGWGPISISLAKRNP 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
               + +DI+ +A+++ + N   NGV+     +QS+     EG  +  I++NPP      
Sbjct: 82  NIDFIALDINERAVKLTEENVKLNGVT-NLHVMQSNLLEGHEGKYYSAIITNPPIRA--- 137

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G +    + +  +  L K+G   + I   Q     +  
Sbjct: 138 ----------------------GKNTVFKLYEQAANALVKNGEIWIVIQKKQGAPSTIAK 175

Query: 239 FESRKLFLVNAFK 251
            E      V   K
Sbjct: 176 LEDLGF-DVEVIK 187


>gi|4104516|gb|AAD02056.1| unknown [Clostridium acetobutylicum DSM 1731]
          Length = 244

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 29/199 (14%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   L+                    +  +E+   
Sbjct: 49  WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 108

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V    + L  +
Sbjct: 109 EDAEVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNV-NNIEILHGN 166

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+G  D+IV+N   I + +++ L  ++  F   +  DG        +  A+ V  +
Sbjct: 167 LMEVVQGKADIIVAN---IIADVINILIPDINKF---LKTDGYFISSGIIKDRAEDVIEN 220

Query: 217 LNKDGLCSVEIGYNQKVDV 235
           L K+    +E+  NQ   +
Sbjct: 221 LKKNKFEIIEVN-NQGEWI 238


>gi|15894566|ref|NP_347915.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
           ATCC 824]
 gi|18314338|sp|P45558|PRMA_CLOAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|15024213|gb|AAK79255.1|AE007641_1 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
           824]
 gi|325508698|gb|ADZ20334.1| ribosomal protein L11 methyltransferase [Clostridium acetobutylicum
           EA 2018]
          Length = 311

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 29/199 (14%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   L+                    +  +E+   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V    + L  +
Sbjct: 176 EDAEVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNV-NNIEILHGN 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+G  D+IV+N   I + +++ L  ++  F   +  DG        +  A+ V  +
Sbjct: 234 LMEVVQGKADIIVAN---IIADVINILIPDINKF---LKTDGYFISSGIIKDRAEDVIEN 287

Query: 217 LNKDGLCSVEIGYNQKVDV 235
           L K+    +E+  NQ   +
Sbjct: 288 LKKNKFEIIEVN-NQGEWI 305


>gi|322385392|ref|ZP_08059037.1| methyltransferase domain protein [Streptococcus cristatus ATCC
           51100]
 gi|321270651|gb|EFX53566.1| methyltransferase domain protein [Streptococcus cristatus ATCC
           51100]
          Length = 195

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +     +  F     ++ ++D      L  +E      +LD+G G G + L L K     
Sbjct: 28  MTFLTDAGVF-----SKKMIDYGSRVLLSALEFNKKETLLDVGCGYGTLGLTLAKAQ-EL 81

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VDI+ +AL++A+ NA  N VS   D  QS+ +  V G F  I+SNPP         
Sbjct: 82  EVTLVDINQRALDLARKNADANQVSA--DIFQSNVYEQVAGQFHHIISNPPIRA------ 133

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVR 237
                              G      +  G   HL  DG  ++ I   Q        +  
Sbjct: 134 -------------------GKQVVHEVISGSYDHLLADGDLTIVIQKKQGAPSAKAKMEE 174

Query: 238 IF-------ESRKLFLVNAFK 251
           +F       + +  +++ + K
Sbjct: 175 VFGNCETLKKDKGYYILRSVK 195


>gi|229490054|ref|ZP_04383907.1| putative methyltransferase [Rhodococcus erythropolis SK121]
 gi|229323155|gb|EEN88923.1| putative methyltransferase [Rhodococcus erythropolis SK121]
          Length = 372

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 26/192 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +        P     VD   +  LP  E        D+GTGTG +   L +     
Sbjct: 164 LDARVHPAFGVFSPVRGEYVDLVASAPLPSTESA-----FDIGTGTGVLAAVLAQRGVKA 218

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                D   +AL+ A+SN    G  ++   +++D F   EG   ++V NPP+I +     
Sbjct: 219 -VTATDQDPRALQCARSNLSRLGYGDQVTVVEADLFP--EGTAPLVVCNPPWIPA--KAT 273

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSV----EI-GYNQKVDV 235
             +E   +DP  +           +    GV+ HL+  G     +    E  G   + ++
Sbjct: 274 SPIEYAVYDPAGA---------MLKGFLTGVAAHLDDGGEAWLILSDIAEHLGLRTRSEL 324

Query: 236 VRIFESRKLFLV 247
             +  +  L +V
Sbjct: 325 HDLIAAGGLTVV 336


>gi|229470502|sp|Q0VPK2|RLMG_ALCBS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 390

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 29/170 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPF 121
           RLT+ +  F  +      +D    F L  + +      ++ DLG G G + +A+LK +P 
Sbjct: 208 RLTVHAGVFAQQQ-----LDIGARFFLDHLPEALHTGAKVADLGCGNGVIGMAVLKANPA 262

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D S  ALE A+ N               D  + +E  FD I+ NPP+       
Sbjct: 263 ARVTFCDESWLALESARDNVSRYFSDAESHFHLGDGLAGLEQRFDCILLNPPFH------ 316

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                          DG + G    R + +  +  L   G   V IG   
Sbjct: 317 ---------------DGYVVGDHVARRLFNQAATALVPGGELRV-IGNRH 350


>gi|150399401|ref|YP_001323168.1| hypothetical protein Mevan_0650 [Methanococcus vannielii SB]
 gi|150012104|gb|ABR54556.1| protein of unknown function DUF890 [Methanococcus vannielii SB]
          Length = 268

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 13/172 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +    D   P P     ++  L  +   I+K+ +  +L++GTG+G + + + K   
Sbjct: 55  FGLDMDFHEDALIPTP-----INRYLFINEVFIKKQGIKSVLEIGTGSGILSIMIAKYF- 108

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSNPPY 174
             +    D   + L+IA  N   N +S   D L S               FD+I+S PPY
Sbjct: 109 NSRCTATDTLNEYLDIAMENICKNKLSNEIDLLNSKGKIIEGIAELTGKKFDLIISYPPY 168

Query: 175 IESVIVDCLGLEVRDFDPRISLD-GGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                V         +   I L  GG  G +    I +     LN++G  ++
Sbjct: 169 YAENSVASKKSFGGAYANEIELIGGGKYGETFSEKIIEEGMNFLNENGAIAI 220


>gi|50311715|ref|XP_455885.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49645021|emb|CAG98593.1| KLLA0F17952p [Kluyveromyces lactis]
          Length = 222

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 11/166 (6%)

Query: 71  TFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGV-- 125
            +EP  ++ LL+D+  A    L       V   +++G+G+G V   L++   P   G+  
Sbjct: 14  VYEPSEDSFLLLDALEADLSWLNNRFNDAVPLTIEIGSGSGIVSTFLMQNGIPNANGLYL 73

Query: 126 GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             D++  AL+        NG     FD LQ+D  SS+ E   D++V NPPY+ +  V  L
Sbjct: 74  ATDLNPWALDATLDTCSKNGCKNSHFDVLQTDLTSSIRENEVDLLVFNPPYVPAETVPEL 133

Query: 184 GLE---VRDFDPR-ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 VRD +   ++LDGG DG+   + + +G+ R L+ +G+  +
Sbjct: 134 PHSNHAVRDDEWLFLALDGGDDGMVVTQRLLNGLDRILSCNGVAYI 179


>gi|319638153|ref|ZP_07992916.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
 gi|317400426|gb|EFV81084.1| hypothetical protein HMPREF0604_00539 [Neisseria mucosa C102]
          Length = 371

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 79/197 (40%), Gaps = 31/197 (15%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++ +    F P R E   L+  A           ++    D+GTG+G +  A+L +    
Sbjct: 165 KIHVPFGVFSPLRGEYLDLIAQA-------PLAPNIQTAFDIGTGSGVIA-AILAKRGIP 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  D + KA+  A +N    G+ +  +    D F   E   D+IV NPP++ +     
Sbjct: 217 DIIATDTNPKAIACATANLERLGLDKAVNIQSIDLFP--ETCADLIVCNPPWLPAKPTSA 274

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV------ 236
           +  E+  +DP  +               +GVS HLN +G   + I  +    +       
Sbjct: 275 I--EIALYDPNNA---------MLTAFLNGVSHHLNPNGEAWLIIS-DLAEHLHLRDKDF 322

Query: 237 --RIFESRKLFLVNAFK 251
             + F++  L +V+  K
Sbjct: 323 LNQCFQTASLDVVDILK 339


>gi|294101614|ref|YP_003553472.1| methyltransferase small [Aminobacterium colombiense DSM 12261]
 gi|293616594|gb|ADE56748.1| methyltransferase small [Aminobacterium colombiense DSM 12261]
          Length = 246

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 30/187 (16%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDI 129
            ++P     + VD+ L  S  +   +D  RIL+LG  TG + L L    P   K  G+DI
Sbjct: 18  AWQPVDGPRVTVDTILLASFVKARGKD--RILELGCATGVISLLLALRLPEATKIEGIDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGL 185
               + +AK NA  NG+  R     SD  +  +      FDV+V+NPPY           
Sbjct: 76  QEDLVNLAKRNAQENGLDARVSFFLSDLRNIKDRYASQSFDVVVTNPPYD---------- 125

Query: 186 EVRDFDPRISL--DGGID-----GLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                +P  S   D   D     GL    + +       L   G   +     +  ++V 
Sbjct: 126 -----EPHRSRWTDSFSDATARQGLYCSLKDVVKAAHFVLKNKGHLFMIFRAQRGAELVA 180

Query: 238 IFESRKL 244
              +  L
Sbjct: 181 ALVNENL 187


>gi|238915995|ref|YP_002929512.1| hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750]
 gi|238871355|gb|ACR71065.1| Hypothetical protein EUBELI_00028 [Eubacterium eligens ATCC 27750]
          Length = 239

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 25/190 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L  ++D F    +  LL   A+A            R+LD+GTG G + + +  ++P 
Sbjct: 13  GLKLIQNTDIFCFGMDAVLLSTYAMA--------GKKDRVLDMGTGNGIIPVLMQSKNPG 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                ++I   + ++A+ N   N + +R   ++ D   +     E  F+V+ SNPPY+  
Sbjct: 65  STYSALEIQEGSAQLARRNVELNHLEDRISVVKGDIKEASTIFGEASFNVVTSNPPYMNE 124

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
               +       +   +   SLD           +    SR L   G   +    N+ VD
Sbjct: 125 NHGIVNPDSAKAIARHELLCSLD----------DVIREASRCLKSKGKMYMVHRPNRLVD 174

Query: 235 VVRIFESRKL 244
           +        L
Sbjct: 175 IFDTMRKYHL 184


>gi|163803378|ref|ZP_02197254.1| hypothetical protein 1103602000422_AND4_19002 [Vibrio sp. AND4]
 gi|159172840|gb|EDP57682.1| hypothetical protein AND4_19002 [Vibrio sp. AND4]
          Length = 239

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                +       ILD+GTGTG + L   +  P      +DI   A+E A  N   +  S
Sbjct: 33  MLGAWVNCSPQDIILDIGTGTGLLALMCAQRFPSAHVTALDIEMSAIEAAHQNFAQSPWS 92

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D      E  F+ I+ NPPY  S                 +     D L H 
Sbjct: 93  DRLRLHYTDVLQFEPEQRFERIICNPPYFNSGEQSKKSQ--------RATARHTDTLQHS 144

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +       L ++G  S  +   +    + +   ++  L
Sbjct: 145 E-LLKRCYELLVEEGTASFVLPITEGKQFISMALQQEWHL 183


>gi|254168616|ref|ZP_04875459.1| methylase, putative [Aciduliprofundum boonei T469]
 gi|197622450|gb|EDY35022.1| methylase, putative [Aciduliprofundum boonei T469]
          Length = 165

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 24/166 (14%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++L++GTG GA+ +   K       + VDI  +A++  +  A     + + +T  SD 
Sbjct: 8   GKKVLEVGTGNGAIAIECAKS--GSSVLAVDIDKEAVKRLREEAKI--KNLKIETKVSDL 63

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           F +V+G +D I+ NPPY+     D   L+           GG  G        D   ++L
Sbjct: 64  FENVDGKYDTIIFNPPYLPGNPKDLKDLQWAG--------GGKYGDEVILKFLDVAWKYL 115

Query: 218 NKDGLC------------SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             DG                E+ Y  +    + F   +++L  A K
Sbjct: 116 ADDGEIYIILSSFNRLNKIFEMPYKFEKIAQKKFSFHEIYLYRAKK 161


>gi|322795182|gb|EFZ18004.1| hypothetical protein SINV_01677 [Solenopsis invicta]
          Length = 215

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 11/159 (6%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVD 128
            +EP  ++ LL+D+ L   L  +        L++G+G+G V   LA+  +      + +D
Sbjct: 16  VYEPSEDSYLLIDT-LEADLNILHAMKPRICLEIGSGSGIVITALAMALKKHNVHFIAID 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLE 186
           I+  A    +  ++ N V    D +Q +    +  E  FD+++ NPPY+ +   + L   
Sbjct: 75  INPDACRATRRTSLLNSVD--VDVVQMNLLDCIQAERTFDIVLFNPPYVVTEYAEVLDDR 132

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +       +  GG +G      +   +   L+  GL  +
Sbjct: 133 LV----FKTWAGGKNGRQVMEQVFVIIPEILSDAGLFYL 167


>gi|328462871|gb|EGF34720.1| hypothetical protein AAULH_02188 [Lactobacillus helveticus MTCC
           5463]
          Length = 209

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRVDYGSGVLIKAMKDATFPQ------ENILDVGTGYGPIGLLAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P      VD++ + L++AK NA  N +S   +   SD ++ V+  + +I++NPP     
Sbjct: 85  WPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYAQVDKKYGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237
                                  G      I  G S HL   G+  V I   Q      +
Sbjct: 142 -----------------------GKKVVSEIIAGASDHLVDQGMLLVVIQKKQGEPSARK 178

Query: 238 IFES 241
           +  +
Sbjct: 179 LMTA 182


>gi|220927621|ref|YP_002504530.1| methyltransferase type 11 [Clostridium cellulolyticum H10]
 gi|219997949|gb|ACL74550.1| Methyltransferase type 11 [Clostridium cellulolyticum H10]
          Length = 260

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 78/190 (41%), Gaps = 25/190 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + ++L  +++ F    +  LL D A        + +   ++LD+GTG+G + + L  ++ 
Sbjct: 22  HGLKLIQNTEKFCFGVDAVLLSDFA--------DVKRNSKVLDIGTGSGIIPVLLAGKTK 73

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGL--FDVIVSNPPYIE 176
             K VG++I  +  E+A  + + N +S+R + +Q D   +        FDV+VSNPPY  
Sbjct: 74  AAKIVGIEIQEEMAEMASRSVLMNRLSDRLEIVQGDIKLYREYFRKSSFDVVVSNPPYTN 133

Query: 177 SV---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                +       +   +   SL            +    +  L   G  ++     +  
Sbjct: 134 KGCGLVNPMDSKAISRHEILCSL----------EDVVSAAAALLVPGGQLAMVHRPERLA 183

Query: 234 DVVRIFESRK 243
           D++    +  
Sbjct: 184 DIICSMRNNG 193


>gi|254169081|ref|ZP_04875918.1| methylase, putative [Aciduliprofundum boonei T469]
 gi|197621920|gb|EDY34498.1| methylase, putative [Aciduliprofundum boonei T469]
          Length = 165

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+L++GTG GA+ +   K       + VDI   A+E  +  A     + + +T  SD 
Sbjct: 8   GKRVLEVGTGNGAIAIECAKS--GSSVLAVDIDKDAVEKLREEAKI--KNLKIETRVSDL 63

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           F +V+G +D ++ NPPY+     D   L+           GG  G        D   ++L
Sbjct: 64  FENVDGKYDTLIFNPPYLPGNPKDLKDLQWAG--------GGKYGDEVILKFLDVAWKYL 115

Query: 218 NKDGLC------------SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             DG                E+ Y  +    + F   +++L  A K
Sbjct: 116 ADDGEIYIILSSFNRFDKIFEMPYKFEKIAQKKFSFHEIYLYRAKK 161


>gi|298376241|ref|ZP_06986197.1| methyltransferase small [Bacteroides sp. 3_1_19]
 gi|298267278|gb|EFI08935.1| methyltransferase small [Bacteroides sp. 3_1_19]
          Length = 218

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 13/156 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   RILD+GTGTG + L L + S       +DI   A   A+ N   +  + R  
Sbjct: 13  WASTERCQRILDVGTGTGLIALMLAQRS-TAILDAIDIDLDACLQARENIAKSPFANRIQ 71

Query: 152 TLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q+     +      +D+IVSNPPY     +D L    +  D + +L    D LS    
Sbjct: 72  VYQTSLSEYMPDENIKYDLIVSNPPYF----IDSL----KCPDTKRNLARHTDTLSLPD- 122

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +     + L  +G  ++ + + Q+  ++ I     L
Sbjct: 123 LLRDSRKLLAPEGNIALVLPFEQRESLIDIAREESL 158


>gi|296333297|ref|ZP_06875750.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675198|ref|YP_003866870.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149495|gb|EFG90391.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413442|gb|ADM38561.1| ribosomal protein L11 methyltransferase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 311

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 69/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A             D+   A+E A+ N   N VS+     
Sbjct: 172 IVQKGDKVIDVGTGSGILSIA-AAMLEAESVHAYDLDPVAVESARLNLKLNKVSDIAQVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGIEGEHDVIVAN---------------------ILA--------EVILRFTSQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L + G       IG+  K +V    E     +V   
Sbjct: 262 YSLLKEGGHFITSGIIGHK-KQEVREALEQAGFTIVEIL 299


>gi|283786192|ref|YP_003366057.1| DNA-binding protein [Citrobacter rodentium ICC168]
 gi|282949646|emb|CBG89265.1| putative DNA-binding protein [Citrobacter rodentium ICC168]
          Length = 245

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++  +A   A+ N   +  ++R 
Sbjct: 39  WAPVAGVKRILDIGTGSGLLALMLAQRTDKSVIIDAVELDDEAAAQAQENVAGSPWADRV 98

Query: 151 DTLQS---DWFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                    W +   G FD+I+SNPPY            E   +            L H 
Sbjct: 99  SVYTGAIQHWAARQTGKFDLIISNPPYYAQGVECATPQREQARY---------TTSLDHP 149

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            T+    +  + ++G   V +         +        L     D    +     RVLL
Sbjct: 150 -TLLATAAELITEEGFLCVVLPEQSGGAFTQQASEMGWHL-RLRTDVAETEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|126465679|ref|YP_001040788.1| methyltransferase small [Staphylothermus marinus F1]
 gi|126014502|gb|ABN69880.1| methyltransferase small [Staphylothermus marinus F1]
          Length = 186

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 16/176 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  +T LL+++         +       +DLG GTG V L LL ++   K + +DI+ 
Sbjct: 2   YEPSDDTWLLLETI-------RDNDYFNNCVDLGCGTGVVGLYLLSKNICSKTLFIDINP 54

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            AL     N   N    +      D  S +E  F+++V+NPPY+           + D+ 
Sbjct: 55  VALLNTVYNLKLNNYQHKGLVASIDNDSILENYFELVVANPPYLPGT-----PENLYDY- 108

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              SL GG  G        D     L ++G+  +      +  ++  + S+K F +
Sbjct: 109 ---SLVGGSRGYEAVLEFIDSAYYLLVENGVFYLVYSSLSQPIIIENYLSKKCFRI 161


>gi|317495084|ref|ZP_07953455.1| methyltransferase small domain-containing protein [Gemella
           moribillum M424]
 gi|316914791|gb|EFV36266.1| methyltransferase small domain-containing protein [Gemella
           moribillum M424]
          Length = 198

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 32/201 (15%)

Query: 52  HRILGWRDFY-NVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTG 109
            +I+  + F  N +    +  F         VD      L     +++V  + D+G G G
Sbjct: 15  EQIISSKIFGENFKFYTDNGVFSKDG-----VDFGTKVLLENFSSQKEVANVADIGCGYG 69

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + + L K++P +    VD++ ++L + K N   N +  + + ++S  F +V+G FD+++
Sbjct: 70  VISIVLAKQNPGYSFTMVDVNNRSLVLTKKNIELNRIENKVEIIESSSFDNVKGDFDIVL 129

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +NPP                            G      I      HL++ G   V I  
Sbjct: 130 TNPPIRA-------------------------GKKIVHQIMIDSFNHLSESGELWVVIQK 164

Query: 230 NQKVDVVRIFESRKLFLVNAF 250
            Q +   +         V   
Sbjct: 165 KQGMASCKKLLEETFSSVEVI 185


>gi|330923634|ref|XP_003300318.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1]
 gi|311325606|gb|EFQ91583.1| hypothetical protein PTT_11528 [Pyrenophora teres f. teres 0-1]
          Length = 340

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 23/188 (12%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           HE   R L    + +     SSD+    P+T L V  +   ++ R   +    I+D+  G
Sbjct: 91  HEPDSRPL---YYVHSSFPASSDSVFFGPDTYLFV--SFLQNIARYFPQVPSSIIDVCCG 145

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-- 165
           +GA  + + +  P  K +G+D++ +AL +   NA   GV       +S+ +++V G    
Sbjct: 146 SGAGAIHMARTYPRAKTLGLDLNPRALSMGNFNAQLAGVE--ISFAESNLYAAVPGYMKS 203

Query: 166 ---DVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLNKD 220
              D+IVSNPPYI S    + L        P  + DGG   GL     I +   + ++  
Sbjct: 204 CGVDLIVSNPPYIASSTDGEDL--------PIYA-DGGAGFGLDLSIQIVEEGMKLMSSS 254

Query: 221 GLCSVEIG 228
           G+  +  G
Sbjct: 255 GVIVIYTG 262


>gi|308050781|ref|YP_003914347.1| methyltransferase small [Ferrimonas balearica DSM 9799]
 gi|307632971|gb|ADN77273.1| methyltransferase small [Ferrimonas balearica DSM 9799]
          Length = 234

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 10/162 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                    D  R+LDLGTG+G + L +  +        V++   A   A++N   +  +
Sbjct: 25  MLGAWAALPDQGRVLDLGTGSGLLAL-MASQRSQAHITAVELDPDACRQAEANFAASPWT 83

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ER   +Q D         FD IV NPPY  S      G          +    +D LSH 
Sbjct: 84  ERLQLVQCDVRDWHPSAPFDAIVCNPPYFTSGERSQRGQS-------RAQARHVDTLSH- 135

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + + + R L+  G  S+ +   +   ++    +  L L+ 
Sbjct: 136 DDLLNALVRLLHPKGCASLILPLVEGELLLTRLANSGLHLIR 177


>gi|269956054|ref|YP_003325843.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
 gi|269304735|gb|ACZ30285.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
          Length = 210

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/135 (28%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES 119
             V + ++S  F P       VD      L  +        +LDLG G G + L L   S
Sbjct: 32  REVEVEVASGVFSPGR-----VDLGTQVLLRAVPSPPSAGNLLDLGCGWGPIALTLATRS 86

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VD+S +AL++ + NA   G++    T   D   + +  F  I SNPP    V 
Sbjct: 87  PGATVWAVDVSERALDLTRRNAERLGLA-NVRTATPDAVPA-DVRFSAIWSNPPI--RVG 142

Query: 180 VDCLGLEVRDFDPRI 194
            D L   +R + PR+
Sbjct: 143 KDVLHGMLRTWLPRL 157


>gi|70727465|ref|YP_254381.1| hypothetical protein SH2466 [Staphylococcus haemolyticus JCSC1435]
 gi|68448191|dbj|BAE05775.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 202

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 75/207 (36%), Gaps = 46/207 (22%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + + LT  +  F        ++ LV + L    P         I D+G G G + L + K
Sbjct: 25  HQLNLTTDAGVFSKAQVDFGSDTLVQTFLNEHPP----GPSKTIADVGCGYGPIGLMIAK 80

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
            SP  +   VD++ +AL +A+ N   N + +     +SD  S ++   FD +++NPP   
Sbjct: 81  VSPHHQITMVDVNKRALNLAEKNKKANQI-DNVIIKESDGLSQLKDSHFDYVLTNPPIRA 139

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---- 232
                                    G      I +   + LN  G   V I   Q     
Sbjct: 140 -------------------------GKEVVHRIFEEAYQQLNSQGELYVVIQKKQGMPSA 174

Query: 233 -VDVVRIF-------ESRKLFLVNAFK 251
              +  IF       +++  +++ + K
Sbjct: 175 KKKMEEIFNNVEVVNKNKGYYILKSRK 201


>gi|168703374|ref|ZP_02735651.1| methyltransferase small [Gemmata obscuriglobus UQM 2246]
          Length = 348

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 56/165 (33%), Gaps = 31/165 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESP 120
           ++       TF          D+     L   E R    +LDLG G GAV CLA     P
Sbjct: 177 SMEFVSRPGTFSYGRF-----DAGSRAMLEVAEIRPGDTVLDLGCGNGAVGCLAGAMAGP 231

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   +D S +A+ +A+ NA  NGV+       +      E  FDVI++NPPY      
Sbjct: 232 DARVTFIDSSLRAIALAELNAKANGVTNTRFVNATRLQGLEEDKFDVILANPPYYAKSE- 290

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                     R   +G    L   G   +
Sbjct: 291 ------------------------ITRLFIEGARDLLKPGGRYYL 311


>gi|315659118|ref|ZP_07911983.1| methyltransferase domain protein [Staphylococcus lugdunensis
           M23590]
 gi|315495842|gb|EFU84172.1| methyltransferase domain protein [Staphylococcus lugdunensis
           M23590]
          Length = 202

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 75/225 (33%), Gaps = 58/225 (25%)

Query: 59  DFYNVRLTLSSD----TFEPRPETELLV---------------DSALAFSLPRIEKRDVV 99
            +Y+ R  + S+     +  + +   LV               D  +   L         
Sbjct: 3   HYYDERPDVKSNQQTIVYSYQHDKLQLVTDAGVFSKDKVDFGSDLLIQTFLNEHPPGPSK 62

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I+D+G G G + L + K  P  K   +D++ +AL +A+ N+  N + +     +SD  S
Sbjct: 63  SIVDVGCGYGPIGLTIAKICPHHKVTMLDVNQRALALAEKNSKHNQI-DNVIIKESDGLS 121

Query: 160 SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           +V+    D I++NPP                            G      I       L 
Sbjct: 122 AVKHNACDYILTNPPIRA-------------------------GKEVVHRIFAEAYDRLR 156

Query: 219 KDGLCSVEIGYNQK-----VDVVRIF-------ESRKLFLVNAFK 251
             G   V I   Q        +  +F       +++  +++ + K
Sbjct: 157 TQGELFVVIQKKQGMPSAKKKLAELFDNVEVVTKNKGYYILRSSK 201


>gi|291400937|ref|XP_002716823.1| PREDICTED: N-6 adenine-specific DNA methyltransferase 1 isoform 1
           [Oryctolagus cuniculus]
          Length = 214

 Score = 86.3 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 12/181 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELARVEICLEVGSGSGVVSAFLASLIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       ++G  D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNQVHIQPVITDLVKGLLPRLKGKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV     + +  GG +G      +   V+  L+  GL  +  I  N   +++     + L
Sbjct: 132 EVGSHGIQAAWAGGRNGREVMDRVFPLVTELLSPRGLFYLVTIKENNPEEILETMRIKGL 191

Query: 245 F 245
            
Sbjct: 192 H 192


>gi|45358117|ref|NP_987674.1| SAM-binding motif-containing protein [Methanococcus maripaludis S2]
 gi|44920874|emb|CAF30110.1| SAM (and some other nucleotide) binding motif [Methanococcus
           maripaludis S2]
          Length = 200

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 66/202 (32%), Gaps = 43/202 (21%)

Query: 65  LTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               S  F P+     T +LV+         +E      +LD+G G G + +++  E   
Sbjct: 28  FKTDSGVFSPKKIDKGTIILVEE--------LELSKDDDVLDVGCGYGVIGISIADEVN- 78

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
                 D++ +++ + + N   NG SE   +  Q D F  V    + VI+SNPP      
Sbjct: 79  -SVTMTDLNNRSVGLTRKNIKLNGKSEKNIEVFQGDLFEKVNNKKYSVIISNPPI----- 132

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVRI 238
                                 G      I       LN++G   V I        + + 
Sbjct: 133 --------------------KAGKELIHKIISKGHNLLNENGSIWVVIQTKHGAKSLTKY 172

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
            E      V       G  RVL
Sbjct: 173 MEEI-FGNVETVT-ISGGYRVL 192


>gi|260102435|ref|ZP_05752672.1| methyltransferase domain protein [Lactobacillus helveticus DSM
           20075]
 gi|260083755|gb|EEW67875.1| methyltransferase domain protein [Lactobacillus helveticus DSM
           20075]
          Length = 209

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRVDYGSGVLIKAMKDATFPQ------ENILDVGTGYGPIGLLAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P      VD++ + L++AK NA  N +S   +   SD ++ V+  + +I++NPP     
Sbjct: 85  WPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYTQVDKKYGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237
                                  G      I  G S HL   G+  V I   Q      +
Sbjct: 142 -----------------------GKKVVSEIIAGASDHLVDQGMLLVVIQKKQGEPSARK 178

Query: 238 IFES 241
           +  +
Sbjct: 179 LMTA 182


>gi|116669530|ref|YP_830463.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116609639|gb|ABK02363.1| methyltransferase small [Arthrobacter sp. FB24]
          Length = 358

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 26/190 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD   A +LP           D+GTGTG +  A+L        V
Sbjct: 153 RIHPHYGTFFPTRSEYVDLVAAAALP-----SDTLAFDVGTGTGVLA-AVLARRGVRSVV 206

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +A+  A  N    GV +R + + +D F    G   +IV NPP+I +     L  
Sbjct: 207 ATDNEPRAIACAAENFRNLGVQDRAEAVLTDMFPP--GRAPLIVCNPPWIPATPHSSLDS 264

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V  +DP         G        + +S HL     G   +    E  G   + D++  
Sbjct: 265 AV--YDP---------GSRMLFRFLNELSDHLEPGGEGWLVLSDLAEHLGLRSRGDLLAA 313

Query: 239 FESRKLFLVN 248
            E+  L +V 
Sbjct: 314 IEAAGLKVVE 323


>gi|91789281|ref|YP_550233.1| methyltransferase small [Polaromonas sp. JS666]
 gi|91698506|gb|ABE45335.1| methyltransferase small [Polaromonas sp. JS666]
          Length = 417

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 24/201 (11%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV   R+     +A     K   I   LG  D  + R+      F P R E   LV  A 
Sbjct: 175 SVASLRELMGFISAHEWRRKGVPIPA-LGE-DGPHNRIHPHYGVFSPVRGEYIDLVAQA- 231

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
               P  E  + +   D+GTGTG +   L   S   + V  D   +AL  A+ N    G 
Sbjct: 232 ----PVREGTEDLLAFDIGTGTGVLAAVLALRSGVQRVVATDQDPRALACARDNLKRLGF 287

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             + +  +++ F   EG   +IV NPP++ +     +   V D D R+ L          
Sbjct: 288 P-QVEVREANLFP--EGRAHIIVCNPPWLPARPGSPVEHAVYDEDSRMLLG--------- 335

Query: 207 RTIADGVSRHLNKD--GLCSV 225
                G++ HL     G   +
Sbjct: 336 --FLGGLAAHLEPKGEGWLIL 354


>gi|317503386|ref|ZP_07961430.1| metallothionein SmtA [Prevotella salivae DSM 15606]
 gi|315665481|gb|EFV05104.1| metallothionein SmtA [Prevotella salivae DSM 15606]
          Length = 231

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 64/160 (40%), Gaps = 14/160 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+GTGTG + + + +  P  + V +DI  +A   AK N   +  + R   + +
Sbjct: 34  RGGKRLLDIGTGTGLIAMMMAQRFPEAEIVAIDIDEEACLQAKENVANSPFATRVRVMHT 93

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGL-EVRDFDPRISLDGGIDGLSHYRTIADGV 213
                  E  FD IVSNPP+  + + +      V      +S          Y  +   V
Sbjct: 94  SLQQYDGENCFDCIVSNPPFFVNSLPNPDEKRSVARHTTTLS----------YEALFTEV 143

Query: 214 SRHLNKDGLCSVEIGYN-QKVDVVRI-FESRKLFLVNAFK 251
            R L + G  S  I    Q   V    F +  L  V A K
Sbjct: 144 KRLLTETGRFSAIIPAECQSGFVAEATFMNLSLTRVCAVK 183


>gi|23097497|ref|NP_690963.1| hypothetical protein OB0042 [Oceanobacillus iheyensis HTE831]
 gi|22775720|dbj|BAC11998.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 246

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 26/189 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  S   F    +  LL D A          +    ILDL TG G + L LL      
Sbjct: 19  MKIIQSPTAFAFSLDAVLLADFASI-------PKKRGAILDLCTGNGVIPL-LLSRKTTA 70

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYIESV 178
           K  GV+I  +   +A+ N   N +  +   +  D     +V G   FD++  NPPY ++ 
Sbjct: 71  KITGVEIQDRIYSMAERNVKLNQLQSQLHMIHGDLKEMQAVLGQSSFDMVTCNPPYFKTP 130

Query: 179 IVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                     L +   +   +L            +      H+   G  ++     + VD
Sbjct: 131 SKTEHNVNEHLTIARHEVHCTL----------EDVVRACKLHVRPGGKVAMVHRPGRLVD 180

Query: 235 VVRIFESRK 243
           ++ +F   K
Sbjct: 181 IIELFRKYK 189


>gi|261345449|ref|ZP_05973093.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541]
 gi|282566496|gb|EFB72031.1| SAM-dependent methyltransferase [Providencia rustigianii DSM 4541]
          Length = 244

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 12/159 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                 V R LD+G+G+G + L L + +       V++   A   A+ N   +  +ER  
Sbjct: 39  WAPINGVQRALDIGSGSGLIALMLAQRNAHLNIDAVELDSDAAAQAQQNFDESPWAERLQ 98

Query: 152 TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            +  D  S  E     +DVIVSNPPY E  I        RD     +       L+H   
Sbjct: 99  IVNQDIISFSEQTTKQYDVIVSNPPYFEPAI------SCRDEKRDQARY--TSTLNHP-I 149

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           + +   R L   G+  + + Y     V  +      F  
Sbjct: 150 LLECARRCLLPQGIFCLVLPYEVGEKVEGMAVENGWFSA 188


>gi|297627202|ref|YP_003688965.1| transferase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922967|emb|CBL57549.1| transferase [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 505

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/152 (28%), Positives = 59/152 (38%), Gaps = 12/152 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP   L V  A            V   LDLG G G   L L + +        DI+ +AL
Sbjct: 145 RPNYVLGVSPASTSLAQLTVPDRVGSALDLGAGCGVQSLHLARHAD--TVTLTDINPRAL 202

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           ++A+     NG+    D     ++  V    FD+IV+NPPY+ S   D     V      
Sbjct: 203 DMARLTLALNGLD--LDVRAGSFYEPVAHDSFDLIVTNPPYVMSPPTDAADRLVYR---- 256

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +GG  G    R +    + HL   GL  V
Sbjct: 257 ---EGGFAGDGLVRHVVREGASHLADGGLLQV 285


>gi|161502253|ref|YP_001569365.1| hypothetical protein SARI_00281 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863600|gb|ABX20223.1| hypothetical protein SARI_00281 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 219

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++  +A   A+ N   +  + R 
Sbjct: 13  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPVDAVELDAEAAMQAQENVAHSPWAHRI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 73  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   S    L     D   N+     RVLL
Sbjct: 123 QTLLAIAADCITEDGFLCVVLPEQIGNAFTQQALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|301771488|ref|XP_002921160.1| PREDICTED: hemK methyltransferase family member 2-like isoform 1
           [Ailuropoda melanoleuca]
 gi|281345919|gb|EFB21503.1| hypothetical protein PANDA_010012 [Ailuropoda melanoleuca]
          Length = 214

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
              +H  +G   F        S+ +EP  +T L      A      E   V   L++G+G
Sbjct: 7   RTPLHGHVGRGAF--------SNVYEPAEDTFL---LLDALEAAAAELTGVEICLEVGSG 55

Query: 108 TGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGL 164
           +G V   L     P    +  DI+ +A       A  N V  +     L       ++  
Sbjct: 56  SGVVSAFLASIIGPQALYMCTDINPEAAACTLETAHCNKVHIQPVITDLVKGLLPRLKEK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++V NPPY+ +        EV       +  GG +G      +       L+  GL  
Sbjct: 116 VDLLVFNPPYVVTP-----PEEVGSHGVEAAWAGGRNGREVMDRLFPLAPDLLSPRGLFY 170

Query: 225 VE-IGYNQKVDVVRIFESRKLF 245
           +  I  N   ++++   +R L 
Sbjct: 171 LVTIKENNPEEILKTMMTRGLQ 192


>gi|16761501|ref|NP_457118.1| hypothetical protein STY2835 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140802|ref|NP_804144.1| hypothetical protein t0268 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052329|ref|ZP_03345207.1| hypothetical protein Salmoneentericaenterica_04976 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425268|ref|ZP_03358018.1| hypothetical protein SentesTyphi_06008 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213585705|ref|ZP_03367531.1| hypothetical protein SentesTyph_32327 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213646346|ref|ZP_03376399.1| hypothetical protein SentesTy_02809 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865165|ref|ZP_03387284.1| hypothetical protein SentesT_35611 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825493|ref|ZP_06544700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|81853238|sp|Q8Z4J9|TRMN6_SALTI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|25325409|pir||AC0830 conserved hypothetical protein STY2835 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503801|emb|CAD02791.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136427|gb|AAO67993.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 245

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECSTPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|320539924|ref|ZP_08039583.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica
           str. Tucson]
 gi|320030110|gb|EFW12130.1| putative 16S rRNA m(2)G1207 methyltransferase [Serratia symbiotica
           str. Tucson]
          Length = 348

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 30/169 (17%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W+ +  +++ +      F  R      +D+  A  L  +E     ++LD+G G G V   
Sbjct: 159 WQSYPLHDLTVKTLPGVFS-RDG----LDTGSALLLSTLENSMQGKVLDVGCGAGVVAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L K SP  K    D+S  AL+ +++    N  S + + + S+ +S++ G FD+I+SNPP+
Sbjct: 214 LAKLSPKVKLTLSDVSAAALDSSRATLAAN--SIKGEVIVSNVYSNITGRFDMIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L+   T+  G  +HL   G  
Sbjct: 272 H---------------------DGLPTSLTAAETLIRGALKHLPIGGRL 299


>gi|326336150|ref|ZP_08202322.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691659|gb|EGD33626.1| SAM-dependent methyltransferase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 234

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 12/157 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  RILD+G GTG + L + +  P      ++I+ +A +  + N   +   +R  
Sbjct: 28  WAASNNPQRILDIGAGTGILSLMMAQRFPTACIHAIEITPEATQECRENISLSPWKDRIS 87

Query: 152 TLQSD--WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             Q D   FS V+   +D+I+SNPP+    +   L    +    R +L+        +  
Sbjct: 88  VYQEDIRIFSKVDKHKYDLIISNPPFFTEKV---LSPNFQRSLSRSNLE------LPFEE 138

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +   VS+ L+  G  +V I Y ++    ++ +   L+
Sbjct: 139 LLYCVSQLLSPIGTFAVIIPYKEESVFKQLAQKDNLY 175


>gi|312127403|ref|YP_003992277.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777422|gb|ADQ06908.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 304

 Score = 85.9 bits (212), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 84/219 (38%), Gaps = 60/219 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRP------ETELLVD--------------SALAFSLPRIEKR 96
           W+ +Y   + +      P        +++ +V               + L     +   +
Sbjct: 109 WKKYYK-PVEIGDIVIVPSWQDYKAEDSKTIVRLDPGMAFGTGTHESTILCLEAIQKYVK 167

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD+GTG+G + +A  K+    + + VDI   A+++A+ NA  NGV    +  ++D
Sbjct: 168 PEMDVLDVGTGSGILAIA-AKKFLAKRVLAVDIDEVAVKVAEENARLNGVE--IEIKKND 224

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +E  FDV+++N                      ++             ++  V + 
Sbjct: 225 LVEGIEEKFDVVIAN---------------------IVA--------DIIMRLSRDVKKV 255

Query: 217 LNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L  +G+      +E   ++  DV++ FE   L +V   K
Sbjct: 256 LKDNGIFISSGIIE---DRLEDVLKSFEKNSLEIVEVKK 291


>gi|319441592|ref|ZP_07990748.1| putative transferase [Corynebacterium variabile DSM 44702]
          Length = 552

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 25/194 (12%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D   P P+    V  A    L ++      R+LDLGTG+G + L+L  +    + V  DI
Sbjct: 162 DVRVPGPDHVPGVGQAPLTLLNQVPAGRPGRLLDLGTGSGVLALSLDAD----EVVATDI 217

Query: 130 SCKALEIAKSN----AVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLG 184
             +AL+ A+++      T+G     D  + +WF  V+G  FD IVSNPP++  V +  +G
Sbjct: 218 HGRALDFARASERSGLRTSGERRPVDWREGNWFGPVDGEYFDRIVSNPPFV--VGIGEVG 275

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD--VVRI 238
              RD    + LDG        R +A G + HL+  G   +      G+ +     V   
Sbjct: 276 HVYRDSG--LELDGAS------RLVAAGAAGHLSPGGTAHLLGAWATGFTESPASRVASW 327

Query: 239 FESRKLFLVNAFKD 252
                +      +D
Sbjct: 328 LPETGIRAWVVQRD 341


>gi|260584234|ref|ZP_05851982.1| methyltransferase [Granulicatella elegans ATCC 700633]
 gi|260158860|gb|EEW93928.1| methyltransferase [Granulicatella elegans ATCC 700633]
          Length = 202

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 35/175 (20%)

Query: 63  VRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  T  +  F        +ELL++     S    E+     +LD+G G G + LA  K  
Sbjct: 28  LSFTSDNGVFSKHTVDFGSELLIE-----SYDVPEQFQKASLLDIGCGYGTMGLAYGKAY 82

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           P      +D++ +A+ +AK NA  NG+    D  +S+ + +V+   +++I+SNPP     
Sbjct: 83  PELSVEMIDVNERAILLAKENAQKNGI-HNVDIHESNLYDAVKKSQYEIIISNPPIRA-- 139

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                  G +   TI +    +L  +G   + I   Q  
Sbjct: 140 -----------------------GKTVVHTILEKAYDYLADNGQLVIVIQKKQGA 171


>gi|119718090|ref|YP_925055.1| methyltransferase small [Nocardioides sp. JS614]
 gi|119538751|gb|ABL83368.1| 16S rRNA m(2)G 1207 methyltransferase [Nocardioides sp. JS614]
          Length = 205

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 8/163 (4%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   LTL S +          +D A A      E     R LDLG G G + LA+    P
Sbjct: 25  WGRELTLVSGSGVFSRGH---LDHATAVLFRETEPPVQGRFLDLGCGYGVIGLAIAAAVP 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 +D++ +A+ +A  NA    V  RF   + +   + E ++D I SNPP    +  
Sbjct: 82  LASITAIDVNDRAIALANENARAMRVDGRFVACRPEQVPTNE-VYDEIWSNPPI--RIGK 138

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGL 222
             L   +  + PR++  GG   +   + + AD + R L + G 
Sbjct: 139 QALHELLLTWLPRLAP-GGRAVMVVGKNLGADSLQRWLGEQGW 180


>gi|251793049|ref|YP_003007775.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534442|gb|ACS97688.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           aphrophilus NJ8700]
          Length = 334

 Score = 85.9 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 23/123 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G +   + K  P  K V  DI   ALE A+     N +      L SD FS 
Sbjct: 198 VLDIGCGAGVIGSYIQKHHPKTKLVMTDIHAMALESAQRTLRENQLQG--TVLASDVFSH 255

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           VEG FD+I+SNPP+ + +      +                       +      HL   
Sbjct: 256 VEGKFDLIISNPPFHDGIDTAYTAVN---------------------ELIKQAKWHLKAG 294

Query: 221 GLC 223
           G  
Sbjct: 295 GEL 297


>gi|183599785|ref|ZP_02961278.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827]
 gi|188022049|gb|EDU60089.1| hypothetical protein PROSTU_03293 [Providencia stuartii ATCC 25827]
          Length = 242

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 14/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +   + LD+G+G+G + L L + +       V++   A + A+ N   +   ER  
Sbjct: 36  WAPVQQAKKALDIGSGSGLIALMLAQRNQQMTVDAVELDKAAAQQAQENFAESKWGERLQ 95

Query: 152 TLQSDWFS---SVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             + D      S +  +D+IVSNPPY   SV       E   +   ++          ++
Sbjct: 96  IFEQDITQFSVSRQKAYDLIVSNPPYFEPSVSCSSEQREQARYTATLT----------HQ 145

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            + D     L  DGL  + + Y+    V  +      F  
Sbjct: 146 ALLDSAMDCLTTDGLFCLVLPYDVGEKVELMAHRNGWFTA 185


>gi|295702341|ref|YP_003595416.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319]
 gi|294800000|gb|ADF37066.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium DSM 319]
          Length = 200

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 65/195 (33%), Gaps = 41/195 (21%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   T     F  +     + LL+++      P         +LD+G G G + LAL KE
Sbjct: 27  SFSFTSDRGVFSKKEIDFGSRLLIETFQMPESPGP-------LLDVGCGYGPIGLALAKE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   VD++ +AL +A+ NA  N VS      QS  + +V+   F  I+SNPP    
Sbjct: 80  DSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYENVKETNFAAILSNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DV 235
                                   G      I +    HL   G   + I   Q     +
Sbjct: 138 ------------------------GKKVVHEILEKSLDHLADQGELWIVIQKKQGAPSAL 173

Query: 236 VRIFESRKLFLVNAF 250
            ++        V   
Sbjct: 174 AKL--ESLFNEVEVV 186


>gi|294496974|ref|YP_003560674.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM
           B1551]
 gi|294346911|gb|ADE67240.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus megaterium QM
           B1551]
          Length = 200

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 65/195 (33%), Gaps = 41/195 (21%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   T     F  +     + LL+++      P         +LD+G G G + LAL KE
Sbjct: 27  SFSFTSDRGVFSKKEVDFGSRLLIETFQMPESPGP-------LLDVGCGYGPIGLALAKE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                   VD++ +AL +A+ NA  N VS      QS  + +V+   F  I+SNPP    
Sbjct: 80  DSQRNVHMVDVNERALALAQKNAEVNSVS-NVSIYQSSCYENVKETNFAAILSNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DV 235
                                   G      I +    HL   G   + I   Q     +
Sbjct: 138 ------------------------GKKVVHEILEKSLDHLADQGELWIVIQKKQGAPSAL 173

Query: 236 VRIFESRKLFLVNAF 250
            ++        V   
Sbjct: 174 AKL--ESLFNEVEVV 186


>gi|283457419|ref|YP_003361995.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
 gi|283133410|dbj|BAI64175.1| methylase of polypeptide chain release factor [Rothia mucilaginosa
           DY-18]
          Length = 618

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 61/168 (36%), Gaps = 18/168 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A        E+  V R LD+GTG G     LL  +        
Sbjct: 191 RPGVL--RKDHVLGIGHASLTLAQITERTPVKRALDVGTGCGIQTFHLLAHAE--HVTAT 246

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           DIS +AL  A+ N + N             R    +      V G LFD++VSNPP++ +
Sbjct: 247 DISERALAFARFNLLLNAQALNIDPQNPQARVSLREGSLLEPVAGELFDLVVSNPPFVIT 306

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             V     E    +     DGG+ G     T+   +   L   G   +
Sbjct: 307 PRVAGESAE----EQFTYRDGGLPGDEIVSTMVRQLPSVLVPGGRAQM 350


>gi|313835743|gb|EFS73457.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA2]
 gi|314928416|gb|EFS92247.1| methyltransferase, HemK family [Propionibacterium acnes HL044PA1]
 gi|314970113|gb|EFT14211.1| methyltransferase, HemK family [Propionibacterium acnes HL037PA3]
 gi|328906767|gb|EGG26539.1| methyltransferase small domain protein [Propionibacterium sp. P08]
          Length = 505

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V R LD+G G G   L L + + +   V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQITIPTHVERALDMGCGCGVQSLHLSRHADY--VVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+            D      +    G  FD+IV+NPPY+ +         V      
Sbjct: 201 EMARLTCRL--CHADVDIRDGSLYDPCRGDTFDLIVTNPPYVMAPPSRDGQRLVYR---- 254

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              +GG  G      +  G    LN  G+  V   +  
Sbjct: 255 ---EGGFAGDGLVEAVVRGAPARLNDGGVLQVLANWAH 289


>gi|289551659|ref|YP_003472563.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181190|gb|ADC88435.1| 16S rRNA m(2)G 1207 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 202

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 39/182 (21%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  +   L          I+D+G G G + L + K  P  K   +D++ +AL +A+ N+ 
Sbjct: 46  DLLIQTFLNEHPPGPSKSIVDVGCGYGPIGLTIAKVCPHHKVTMLDVNQRALALAEKNSK 105

Query: 143 TNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N + +     +SD  S+V+    D I++NPP                            
Sbjct: 106 HNQI-DNVIIKESDGLSAVKHNACDYILTNPPIRA------------------------- 139

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRIF-------ESRKLFLVNA 249
           G      I       L   G   V I   Q        +  +F       +++  +++ +
Sbjct: 140 GKEVVHRIFAEAYDRLRTQGELFVVIQKKQGMSSAKKKLAELFDNVEVVTKNKGYYILRS 199

Query: 250 FK 251
            K
Sbjct: 200 SK 201


>gi|15920608|ref|NP_376277.1| hypothetical protein ST0403 [Sulfolobus tokodaii str. 7]
 gi|15621391|dbj|BAB65386.1| 194aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 194

 Score = 85.5 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 27/169 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  I   +   + D+G G G + + +  ++P  K   +DI  KA+ +A+ N  
Sbjct: 40  DLGTRMLLENIVLPEEGVVADIGCGYGPIGIYIALKNPNLKIYMIDIDKKAVYLAEKNVK 99

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              +  R   ++++   +++   +   SNPP                      L  G   
Sbjct: 100 RYKLENRVIVIRNNILENLDIQLNGAYSNPP----------------------LKAGK-- 135

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                 +A      L  +G+  V + Y  + +V+ IF       V   K
Sbjct: 136 -EFIEKLAQQSYERLLHNGVLEVVV-YKGEKNVLDIFGKY-FNEVKIIK 181


>gi|257388710|ref|YP_003178483.1| methylase [Halomicrobium mukohataei DSM 12286]
 gi|257171017|gb|ACV48776.1| methylase [Halomicrobium mukohataei DSM 12286]
          Length = 208

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 76/198 (38%), Gaps = 23/198 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           +   ++P  +++LL  +A + + P        R LD+GTG+G V   L +       V  
Sbjct: 22  TETVYQPAADSDLLARTARSHATP------GDRGLDVGTGSGYVAETLAEA--GVDVVAS 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           D++  A    +  A     + R D L        E  FD++  NPPY+ +   D    + 
Sbjct: 74  DLNPDAC---REAAARGVPAVRADLLAPF----REDAFDLVTFNPPYLPT-EPDKEWDDW 125

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVRIFESRKLFL 246
            +     +L GG DG        + V R L   G   + I     + DV R    R L  
Sbjct: 126 MEH----ALSGGEDGRRLVDPFLEAVERVLAPGGRVFLLISSLTGIGDVQRYAHERGLAG 181

Query: 247 VNAFKDYGG-NDRVLLFC 263
                D     +R+++  
Sbjct: 182 -EIVADEAHPYERLVVIR 198


>gi|227504902|ref|ZP_03934951.1| methyltransferase small [Corynebacterium striatum ATCC 6940]
 gi|227198495|gb|EEI78543.1| methyltransferase small [Corynebacterium striatum ATCC 6940]
          Length = 553

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P   L V +A    L       V   LDLGTG+G   L  L  +        D+  +
Sbjct: 139 VPGPGHVLGVGAASLSLLQSTPLTPVESALDLGTGSGVQLLGQLSTAE--HVTATDLHER 196

Query: 133 ALEIAKSNAVTNG--VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
           ALE+A++     G   S++ + LQ  WF  V G+ FD IV+NPP++  +       EV  
Sbjct: 197 ALELARATIAAAGTDASDKVELLQGSWFEPVAGMSFDRIVANPPFVVGL------PEVG- 249

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               I  D G++       +      HLN  G
Sbjct: 250 ---HIYRDSGLNLDGASELVVSQAVEHLNPGG 278


>gi|310780112|ref|YP_003968444.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
 gi|309749435|gb|ADO84096.1| methyltransferase small [Ilyobacter polytropus DSM 2926]
          Length = 245

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 22/158 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R V +ILDLGTG G++   LL      +  GV+I   + ++A+ N   N + E+   + 
Sbjct: 43  NRGVNKILDLGTGNGSIP-MLLSSRSKARITGVEIQEVSADLARRNIELNKLQEQVGIIH 101

Query: 155 SDWFSSVEGLF-----DVIVSNPPYIE-----SVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            D   + +  F     D ++SNPP+ +      ++ D   L     +   +L        
Sbjct: 102 DDL-KNWKKHFKTGSQDAVISNPPFFKFNGNTELLNDLDQLTYARHEITANL-------- 152

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
               I    S  L   G  ++    ++ ++++ +    
Sbjct: 153 --EDIVSTASGLLKDRGYFALVHRPDRMIEILDLMRKY 188


>gi|323340128|ref|ZP_08080392.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644]
 gi|323092319|gb|EFZ34927.1| methyltransferase domain protein [Lactobacillus ruminis ATCC 25644]
          Length = 201

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 37/167 (22%)

Query: 62  NVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + +    +  F        + +L+++A    L         +ILD+G G G + L+L K+
Sbjct: 28  DFKFVTDNGVFSKNTIDFGSRVLIEAAGGLEL-------GDKILDVGCGYGPIGLSLAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +P      VD++  ALE+AK NA  N +       +S  + +VE   F  IV+NPP    
Sbjct: 81  NPDAMVEMVDVNELALELAKKNAAKNTIK-NVSIHESSIYENVEETNFSTIVTNPPIRA- 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                   G      I      HL + G+  
Sbjct: 139 ------------------------GKEVVHGILLSGIDHLKEGGMIL 161


>gi|163787262|ref|ZP_02181709.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1]
 gi|159877150|gb|EDP71207.1| putative RNA methyltransferase [Flavobacteriales bacterium ALC-1]
          Length = 237

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +   ILDLG GTG + L L + S       ++I   A E    N   +  ++R     
Sbjct: 35  KENPFSILDLGAGTGILSLMLAQRSSAQNIEAIEIDADAYEQCSENFENSPWADRLFCYH 94

Query: 155 SDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +        VE  FD+I+ NPP+           + RD      L    D +     +  
Sbjct: 95  ASLLEFVKEVEDKFDLIICNPPFYSEDYKT--DNKARD------LARFNDAMPF-EHLIY 145

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                L+ DG+ SV I Y ++  ++ +     L   +  +
Sbjct: 146 ATLNLLSDDGIFSVVIPYKEEEKLIELASKVGLHPNHILR 185


>gi|330828265|ref|YP_004391217.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565]
 gi|328803401|gb|AEB48600.1| tRNA (adenine-N(6)-)-methyltransferase [Aeromonas veronii B565]
          Length = 236

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 10/135 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+GTG+G + L L +      +   V++   A   A+ NA  +  ++R 
Sbjct: 33  WAPVEQARRVLDIGTGSGLIALMLAQRSRSDCRLDAVELDINAASQARENAAASPWADRV 92

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             ++S         +D++VSNPPY  +             DP  +L      L     + 
Sbjct: 93  TVIESAIQDYQADPYDLVVSNPPYFVAGQSFS--------DPARALARHTGALD-SHALL 143

Query: 211 DGVSRHLNKDGLCSV 225
               R L+ +G  ++
Sbjct: 144 AACDRLLSPNGQVAL 158


>gi|323465895|gb|ADX69582.1| Methyltransferase domain protein [Lactobacillus helveticus H10]
          Length = 209

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRVDYGSGVLIKAMKDATFPQ------ENILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P      VD++ + L++AK NA  N +S   +   SD ++ V+  + +I++NPP     
Sbjct: 85  WPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYAQVDKKYGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237
                                  G      I  G S HL   G+  V I   Q      +
Sbjct: 142 -----------------------GKKVVSEIIAGASDHLVDQGMLLVVIQKKQGEPSARK 178

Query: 238 IFES 241
           +  +
Sbjct: 179 LMTA 182


>gi|161506946|ref|YP_001576900.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571]
 gi|160347935|gb|ABX26609.1| hypothetical protein lhv_0398 [Lactobacillus helveticus DPC 4571]
          Length = 209

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRVDYGSGVLIKAMKDATFPQ------ENILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P      VD++ + L++AK NA  N +S   +   SD ++ V+  + +I++NPP     
Sbjct: 85  WPDQTVDMVDVNERGLKLAKQNAQVNHIS-NVNIYSSDCYAQVDKKYGLILTNPPIRA-- 141

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DVVR 237
                                  G      I  G S HL   G+  V I   Q      +
Sbjct: 142 -----------------------GKKVVSEIIAGASDHLVDQGMLLVVIQKKQGEPSARK 178

Query: 238 IFES 241
           +  +
Sbjct: 179 LMTA 182


>gi|299821048|ref|ZP_07052936.1| methyltransferase domain protein [Listeria grayi DSM 20601]
 gi|299816713|gb|EFI83949.1| methyltransferase domain protein [Listeria grayi DSM 20601]
          Length = 200

 Score = 85.5 bits (211), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 49/205 (23%)

Query: 63  VRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +     S  F        + LL+++               ++LD+G G G + LAL K  
Sbjct: 28  LSFISDSGVFSKNTVDFGSRLLIENF-------APNSTDGKVLDVGCGYGPIGLALAKAY 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
           P  +   VD++ +A+E+AK NA  N + +     +S  + +V    +  I+SNPP     
Sbjct: 81  PAMRIDMVDVNERAIELAKENATLNHI-DNAAIFESSVYENVTVDDYRYILSNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-----GYNQKV 233
                                  G      I      HL   G   + I     G + + 
Sbjct: 138 -----------------------GKVIVHQILSDAYGHLISGGELWIVIQKKQGGPSAQK 174

Query: 234 DVVRIF-------ESRKLFLVNAFK 251
            +  +F         +  F+  + K
Sbjct: 175 KMEAVFGNVEMVARDKGYFIYKSVK 199


>gi|295425584|ref|ZP_06818271.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295064600|gb|EFG55521.1| methyltransferase domain protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 205

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 37/195 (18%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++    +  F   R +  + +L+ +    + P         ILD+GTG G + L   K 
Sbjct: 31  DLKFNTDAGVFSKMRVDYGSGVLIKAMHNVTFPDAG------ILDVGTGYGPLGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P      VD++ + L++AK NA  N + +  +   SD ++ V+    F +I++NPP   
Sbjct: 85  WPNQTVEMVDVNERGLKLAKRNAQLNHI-DNVEIYSSDVYAQVDKSKKFGLIITNPPIRA 143

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                                    G      I  G + HL KDG+  V I   Q     
Sbjct: 144 -------------------------GKKVVSAILAGAADHLVKDGILLVVIQKKQGEPSA 178

Query: 237 RIFESRKLFLVNAFK 251
           R             +
Sbjct: 179 RKLLKATFGNCEILQ 193


>gi|325983696|ref|YP_004296098.1| methyltransferase small [Nitrosomonas sp. AL212]
 gi|325533215|gb|ADZ27936.1| methyltransferase small [Nitrosomonas sp. AL212]
          Length = 381

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 61/167 (36%), Gaps = 21/167 (12%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            V +      F P R E   L+  A    L   E        D+GTGTG +  AL     
Sbjct: 170 GVSIHPHYGVFAPIRNEYVQLIAQAPIPELLVTESTAF----DIGTGTGVLAAALALRG- 224

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                  D   +AL  A+ N     +  + + +Q+D F   +G   +IV NPP+I +   
Sbjct: 225 VRHITATDQDARALNCARDNLTRLNMLNQVELVQADLFP--QGQAALIVCNPPWIPARPS 282

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
             L   + D D R+            R    G++ HL     G   +
Sbjct: 283 SPLEHAIFDPDSRM-----------LRGFLQGLNAHLLPGGEGWLIL 318


>gi|171742499|ref|ZP_02918306.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC
           27678]
 gi|171278113|gb|EDT45774.1| hypothetical protein BIFDEN_01611 [Bifidobacterium dentium ATCC
           27678]
          Length = 216

 Score = 85.5 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E       LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+       
Sbjct: 70  EPAQEGTFLDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIGTIHAVT 129

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +    +   FD+I SNPP    +  + L   +  + PR++  GG   L   + +    
Sbjct: 130 ADEIPHDL--TFDLIWSNPPI--RIGKEALHELLMAWLPRLN-TGGAAYLVVQKNL---G 181

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           S  L      + ++G     +V +   ++   ++   K
Sbjct: 182 SDSLIP--WLATQLGD--GYEVSKYASAKGFRVIEVMK 215


>gi|209526649|ref|ZP_03275173.1| methyltransferase small [Arthrospira maxima CS-328]
 gi|209492885|gb|EDZ93216.1| methyltransferase small [Arthrospira maxima CS-328]
          Length = 236

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + + V  ILD+GTG+G + L L + SP  +   V+I   A   A  N   +    R  
Sbjct: 32  WTDIKSVDNILDIGTGSGLIALILAQRSP-AEIEAVEIDKDAYIQASENIANSPWRSRLK 90

Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +    +    +  +D+I+SNPP+  +                I+L    D LS    
Sbjct: 91  IYHNSIQKYADFCDIQYDLIISNPPFFANAYKPDNHQ--------IALAKHSDSLSQID- 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           I    ++ L   G  ++       +    I  +  L+
Sbjct: 142 ILQVTTKLLKPTGKLAIIYPTAAAIKFQEIAATFGLY 178


>gi|293399720|ref|ZP_06643866.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291306120|gb|EFE47363.1| methyltransferase domain protein [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 198

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 63/171 (36%), Gaps = 32/171 (18%)

Query: 82  VDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           VD      L  + KRD +   ILD+G G G + + +    P      VD++ +A+ +AK 
Sbjct: 41  VDFGTQVFLNTLLKRDELQDTILDVGCGYGPIGIIIKHTYPDKHVEMVDVNPRAIALAKE 100

Query: 140 NAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  N V  +    +SD ++ V G  +  I++NPP                         
Sbjct: 101 NAKANHVDVQIH--ESDVYAQVTGNTYTDILTNPPIRA---------------------- 136

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRIFESRKLFLV 247
              G      I +    HL + G   V I   Q     V +I E      +
Sbjct: 137 ---GKKVIYEIFEKAYDHLCEGGCLWVVIRKQQGANSAVNKIKEVFGNCDI 184


>gi|156848589|ref|XP_001647176.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117860|gb|EDO19318.1| hypothetical protein Kpol_1036p63 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 220

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 83/193 (43%), Gaps = 12/193 (6%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVC-LALLKESP---FFKGV 125
            +EP  ++ LL+D+        +EK + +  + + G G+G V    +    P       +
Sbjct: 14  IYEPSEDSFLLLDALEKEQGYLVEKFNGLVLVCEFGPGSGIVTTFMIQNRIPVGLNSVYL 73

Query: 126 GVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
            VD+S  A+E     A  N   +    DT+Q +  + + +   DV++ NPPY+ +  V  
Sbjct: 74  AVDVSPWAVEATLETAKLNNCDKGTVLDTVQGNLGTGLRKNQVDVLLFNPPYVPAEEVPE 133

Query: 183 LGLEVRDFDPR-ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
           +     D+    ++LDGG DG+   + + D +   L+K+G+  +     N    V     
Sbjct: 134 VPESKDDYKWLDLALDGGEDGMVVTQKVLDNLDSILSKNGVAYILFCARNHPEQVAEEMR 193

Query: 241 SRKLFL--VNAFK 251
            +   +  V   K
Sbjct: 194 LKGWKIDLVEHRK 206


>gi|111023772|ref|YP_706744.1| rRNA/tRNA methylase [Rhodococcus jostii RHA1]
 gi|110823302|gb|ABG98586.1| probable rRNA/tRNA methylase [Rhodococcus jostii RHA1]
          Length = 492

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 70/194 (36%), Gaps = 26/194 (13%)

Query: 70  DTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            +  PR    +  + V  A    L       V  +LD+GTG G   L     +       
Sbjct: 124 GSLRPRETPVDHVIGVGHASLSLLQATPTAPVGTLLDVGTGCGIQALHGASYAD--SVTA 181

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            D++ +A+++A   A  N   ER + L   WF  VEG  FD +V+NPP++ S        
Sbjct: 182 TDLNVRAVDLAAVTAALN--EERVELLAGSWFEPVEGRTFDQVVANPPFVVSRARVG--- 236

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRI 238
                      D G+D       +   V+ +L   G          VE G + +  V   
Sbjct: 237 -------HTYRDSGLDLDGASELMISRVADYLAPGGTAALLASWIHVE-GEDWRARVASW 288

Query: 239 FESRKLFLVNAFKD 252
             +  +      +D
Sbjct: 289 LPAHGVDAWVVQRD 302


>gi|261492828|ref|ZP_05989375.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494807|ref|ZP_05991285.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261309518|gb|EEY10743.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311510|gb|EEY12666.1| 16S ribosomal RNA m2G1207 methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 329

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +   ++ +      F     +  L D+     L   +K D ++  +LDLG G G + 
Sbjct: 150 WKSYRLQDLDVFALPAVFS----SAEL-DNGTKLLLSTFDKADRLKGKVLDLGCGAGVIG 204

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             L ++ P  K    DI   ALE  +     N +    + + SD FS +   FD+IVSNP
Sbjct: 205 ATLKQQFPKIKLTMSDIHAMALESGRRTLAENQLEG--EVVASDVFSHINERFDLIVSNP 262

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + V                              +      HL K G  
Sbjct: 263 PFHDGVDTA---------------------YRAVEELIFQAKNHLTKGGEL 292


>gi|225076469|ref|ZP_03719668.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
           NRL30031/H210]
 gi|224952148|gb|EEG33357.1| hypothetical protein NEIFLAOT_01515 [Neisseria flavescens
           NRL30031/H210]
          Length = 371

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 22/167 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + ++ +    F P R E   L+              ++    D+GTG+G +  A+L +  
Sbjct: 163 DRKIHVPFGVFSPLRGEYLDLIAQV-------PLAPNIQTAFDIGTGSGVIA-AILAKRG 214

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               +  D + KA+  A +N    G+++  +    D F   E   D+IV NPP++ +   
Sbjct: 215 IPDIIATDTNPKAIACATANLERLGLNKAVNIQSIDLFP--ESCADLIVCNPPWLPAKPT 272

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +  E   +DP  +               +GV +HLN +G   + I
Sbjct: 273 SAI--ETALYDPNHA---------MLTAFLNGVHKHLNPNGEAWLII 308


>gi|157693045|ref|YP_001487507.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032]
 gi|166989894|sp|A8FFD0|PRMA_BACP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157681803|gb|ABV62947.1| ribosomal protein L11 methyltransferase [Bacillus pumilus SAFR-032]
          Length = 311

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 72/219 (32%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHSDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++   ++D+GTG+G + +A             D+   A+E AK N   NGVSE+    
Sbjct: 172 YVKENDTVIDVGTGSGILSVAAAMVGAK-DIQAFDLDTVAVESAKQNIELNGVSEQVTVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++               D  
Sbjct: 231 QNNLLDGISGEHDVIVAN---------------------ILA--------EVILRFTDQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L KDG       IG  +K+ V    E     +V   
Sbjct: 262 YDLLKKDGYFITSGIIG-QKKLQVKTALEEAGFDIVEVL 299


>gi|290476141|ref|YP_003469041.1| putative methyltransferase [Xenorhabdus bovienii SS-2004]
 gi|289175474|emb|CBJ82277.1| putative methyltransferase with S-adenosyl-L-methionine-dependent
           methyltransferase domain [Xenorhabdus bovienii SS-2004]
          Length = 246

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 61/176 (34%), Gaps = 30/176 (17%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                +  + LD+G G+G V L + + +     +  V++   A   A  N   +  ++R 
Sbjct: 40  WAPVGNRKKCLDIGCGSGLVALMIAQRTDDHSVIDAVELDTHAARQAIENVQESPWADRV 99

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD------GGID 201
              Q D     +     +D+IVSNPPY               F+P  +            
Sbjct: 100 KVYQQDIHDFTQQNHLQYDLIVSNPPY---------------FEPANACRNEARSQARYT 144

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-----LVNAFKD 252
           G   +R + D     +   GL  V + YN      ++   R  F      +   +D
Sbjct: 145 GSLTHRGLLDCAEHLIKPTGLFCVVLPYNIGETFEQMAAERGWFTHHRVNIRDRQD 200


>gi|308187814|ref|YP_003931945.1| hypothetical protein Pvag_2323 [Pantoea vagans C9-1]
 gi|308058324|gb|ADO10496.1| Uncharacterized protein [Pantoea vagans C9-1]
          Length = 248

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+G+G+G + L L + +P   +   V++  +A + A+ N   +   ER 
Sbjct: 42  WAPVAGVRRILDIGSGSGLIALMLAQRTPSQVQIDAVELEPEAAQQAQENMQQSPWPERI 101

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D   W    +  + +IVSNPPY    +        RD     +       L H +
Sbjct: 102 QVHQQDIASWAEQCDKRYSLIVSNPPYFTPGVACSTV--ARDNARATA------SLDH-Q 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLLF 262
           T+    +  + ++G+  V +  +     + + ++    L +   D   Y      RV+L 
Sbjct: 153 TLLRSAALLIEEEGMFCVVLPVDIGQTFITLAQADGWHL-HFRLDVAEYAHRPPHRVVLG 211


>gi|293556577|ref|ZP_06675145.1| 16S RNA methylase [Enterococcus faecium E1039]
 gi|293571203|ref|ZP_06682238.1| methyltransferase small domain superfamily [Enterococcus faecium
           E980]
 gi|291601253|gb|EFF31537.1| 16S RNA methylase [Enterococcus faecium E1039]
 gi|291608714|gb|EFF38001.1| methyltransferase small domain superfamily [Enterococcus faecium
           E980]
          Length = 210

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 34  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 93

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E+ D  QS+ +  + E  +  IVSNPP       
Sbjct: 94  F-VEMVDINERAVSLAQGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPPIRA---- 147

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L + G  ++ I   Q        +
Sbjct: 148 ---------------------GKKVVHEILTGAYPRLKQGGTLTIVIQKKQGAPSAQKKM 186

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 187 EETFGNAEIVTKDKGYYIIKSVK 209


>gi|257888043|ref|ZP_05667696.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,141,733]
 gi|257896338|ref|ZP_05675991.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12]
 gi|257899313|ref|ZP_05678966.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15]
 gi|257824097|gb|EEV51029.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,141,733]
 gi|257832903|gb|EEV59324.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com12]
 gi|257837225|gb|EEV62299.1| rRNA small subunit methyltransferase C [Enterococcus faecium Com15]
          Length = 201

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 25  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E+ D  QS+ +  + E  +  IVSNPP       
Sbjct: 85  F-VEMVDINERAVSLAQGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPPIRA---- 138

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L + G  ++ I   Q        +
Sbjct: 139 ---------------------GKKVVHEILTGAYPRLKQGGTLTIVIQKKQGAPSAQKKM 177

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 178 EETFGNAEIVTKDKGYYIIKSVK 200


>gi|227550698|ref|ZP_03980747.1| methyltransferase [Enterococcus faecium TX1330]
 gi|293379424|ref|ZP_06625568.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
 gi|227180159|gb|EEI61131.1| methyltransferase [Enterococcus faecium TX1330]
 gi|292641947|gb|EFF60113.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
          Length = 210

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 34  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWEELPDEGKILDVGCGYGPIGLALAFATQR 93

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E+ D  QS+ +  + E  +  IVSNPP       
Sbjct: 94  F-VEMVDINERAVSLAQGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPPIRA---- 147

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L + G  ++ I   Q        +
Sbjct: 148 ---------------------GKKVVHEILTGAYPRLKQGGTLTIVIQKKQGAPSAQKKM 186

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 187 EETFGNAEIVTKDKGYYIIKSVK 209


>gi|189461316|ref|ZP_03010101.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136]
 gi|189431845|gb|EDV00830.1| hypothetical protein BACCOP_01966 [Bacteroides coprocola DSM 17136]
          Length = 236

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 13/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            ++     R+LD+GTGTG + L + + S     VG DI  +A+E A  N   +    R  
Sbjct: 32  WVQVDTAKRVLDIGTGTGLIALMVAQRSA-ACVVGTDIDGEAVEQAMENVNASPWKNRIC 90

Query: 152 TLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
             + D         G FDVIVSNPPY    +      E RD            G   +  
Sbjct: 91  ICRKDVMQMNGEEYGSFDVIVSNPPYFVEEV--RCPDERRD-------TARHTGNLTFGN 141

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +   V + L +DG+ SV I  +     V +   + L++  
Sbjct: 142 LLTAVEKLLTEDGVFSVIIPADAGDFFVSLAAEKHLYIQR 181


>gi|157150082|ref|YP_001450367.1| methyltransferase domain-containing protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157074876|gb|ABV09559.1| methyltransferase domain protein [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 197

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 70/192 (36%), Gaps = 35/192 (18%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +     +  F     ++ ++D      L  I+      ILDLG G G + L L+K S 
Sbjct: 26  HPMTFLTDAGVF-----SKKMIDYGSQVLLSTIDFSKGDTILDLGCGYGPLGLTLVK-SQ 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             K   VDI+ +AL++A+ NA  N VS   +  QS+ +  V G+FD I+SNPP       
Sbjct: 80  AVKATLVDINLRALDLARKNAELNKVSA--EIFQSNVYDQVTGIFDHIISNPPIRA---- 133

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIF 239
                                G      +  G   HL   G  ++ I   Q         
Sbjct: 134 ---------------------GKQVVHQVITGSFEHLTLGGDLTIVIQKKQGAPSAKAKM 172

Query: 240 ESRKLFLVNAFK 251
           E          K
Sbjct: 173 EEV-FGNCEVVK 183


>gi|254363054|ref|ZP_04979113.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
           PHL213]
 gi|153094719|gb|EDN75509.1| rRNA (guanine-N(2)-)-methyltransferase [Mannheimia haemolytica
           PHL213]
          Length = 329

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 62/169 (36%), Gaps = 26/169 (15%)

Query: 58  RDFYNVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLA 114
           + F+        D F+ P   +   +D+     L   +K D ++  +LDLG G G +   
Sbjct: 147 KKFWKSYRLQDLDVFDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGAT 206

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L ++ P  K    DI   ALE  +     N +    + + SD FS +   FD+IVSNPP+
Sbjct: 207 LKQQFPKIKLTMSDIHAMALESGRRTLAENQLEG--EVVASDVFSHINERFDLIVSNPPF 264

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + V                              +      HL K G  
Sbjct: 265 HDGVDTA---------------------YRAVEELIFQAKNHLTKGGEL 292


>gi|257893152|ref|ZP_05672805.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,408]
 gi|257829531|gb|EEV56138.1| rRNA small subunit methyltransferase C [Enterococcus faecium
           1,231,408]
          Length = 201

 Score = 85.1 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 40/203 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                  +D+     ET       L  +    E  D  +ILD+G G G + LAL   +  
Sbjct: 25  GRTFQFVTDSGVFSRETVDYGSRVLIDAFDWKELPDEGKILDVGCGYGPIGLALAFATQR 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIV 180
           F    VDI+ +A+ +A+ NA  N + E+ D  QS+ +  + E  +  IVSNPP       
Sbjct: 85  F-VEMVDINERAVSLAQGNAKRNQI-EQVDIHQSNIYEVLHEETYAAIVSNPPIRA---- 138

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DV 235
                                G      I  G    L + G  ++ I   Q        +
Sbjct: 139 ---------------------GKKVVHEILTGAYPRLKQGGTLTIVIQKKQGAPSAQKKM 177

Query: 236 VRIF-------ESRKLFLVNAFK 251
              F       + +  +++ + K
Sbjct: 178 EETFGNAEIVTKDKGYYIIKSVK 200


>gi|296104250|ref|YP_003614396.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058709|gb|ADF63447.1| putative O-methyltransferase [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 245

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++  +A   A  NA+ +  + R 
Sbjct: 39  WAPVAGVKRILDIGTGSGLLALMLAQRTDEHVTIDAVELDAQAAGQASENALESPWATRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D   W       +D+IVSNPPY    V       E   +           G   +
Sbjct: 99  KVECADVLAWAPEQTARYDLIVSNPPYYAPGVECGTPEREQARY----------TGSLDH 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           + +    +  ++++G   V +  +     + I        +    D    +     RVLL
Sbjct: 149 KALLTSAANLISEEGFFCVVLPESTGNTFIEIAREMGW-NLRLRTDISDTEGRLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|241760554|ref|ZP_04758647.1| putative methyltransferase [Neisseria flavescens SK114]
 gi|241319058|gb|EER55560.1| putative methyltransferase [Neisseria flavescens SK114]
          Length = 371

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 29/196 (14%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++ +    F P R E   L+  A           ++    D+GTG+G +  A+L +    
Sbjct: 165 KIHVPFGVFSPLRGEYLDLIAQA-------PLAPNIQTAFDIGTGSGVIA-AILTKRGIP 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  D + KA+  A +N    G+++  +    D F   +   D+IV NPP++ +     
Sbjct: 217 NIIATDTNPKAIACATANLKRLGLNKAVNIQSIDLFP--KSCADLIVCNPPWLPAKPTSA 274

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSV----EIGYNQKVD-V 235
           +  E   +DP  +               +GV +HLN +G     +    E  +    D +
Sbjct: 275 I--ETALYDPNHA---------MLTAFLNGVRKHLNPNGEAWLIISDLAEHLHLHDKDFL 323

Query: 236 VRIFESRKLFLVNAFK 251
            + F++  L +V+  K
Sbjct: 324 NQCFQTASLNVVDILK 339


>gi|325860566|ref|ZP_08173670.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A]
 gi|325481951|gb|EGC84980.1| methyltransferase domain protein [Prevotella denticola CRIS 18C-A]
          Length = 232

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 14/150 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L + +  P      V++   A+  A  N V +   +R + + +   D+
Sbjct: 36  ILDIGTGTGLIALMMAQRFPSAHIDAVEMDEGAVADAHLNIVRSPFRDRINIIHTSLQDY 95

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCL-GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                  ++ IV NPPY  + +   L                  D LS  + +A    R 
Sbjct: 96  HPQNGCRYEAIVCNPPYFINSLKSPLRQRSTARH---------ADTLSC-QELARHAERL 145

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           L ++G  SV I    K  +        L +
Sbjct: 146 LKENGKLSVIISAENKETLESEALFCGLSI 175


>gi|323127350|gb|ADX24647.1| 16S rRNA m(2)G 1207 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 210

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 67/188 (35%), Gaps = 33/188 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                S  F     ++ ++D      L  +       +LDLG G G + ++L K     +
Sbjct: 40  TFLTDSGVF-----SKKMIDFGSQALLNTLHFNKGEWVLDLGCGYGPLGISLAK-VQEVE 93

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VDI+ +A+++A+ NA  N V       QS+ + +V G F+ I+SNPP          
Sbjct: 94  ATLVDINNRAIDLAQKNARQNQVD--VTIFQSNIYENVRGSFNHIISNPPIRA------- 144

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                             G      I +     L+  G  ++ I   Q     +   +  
Sbjct: 145 ------------------GKKVVHEIIEKSIDFLDDQGDLTIVIQKKQGAPSAKEKMANV 186

Query: 244 LFLVNAFK 251
              V+  K
Sbjct: 187 FGNVDIIK 194


>gi|320095377|ref|ZP_08027057.1| transferase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977682|gb|EFW09345.1| transferase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 434

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 11/154 (7%)

Query: 74  PRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P  E  +L +  A    L +  +  V   LDLG G G   L L       + V  D+S +
Sbjct: 48  PLDEDHVLGIGGASLSLLGQTIRERVGSALDLGCGCGTQALYLATHCG--RVVATDLSAR 105

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A  + + NA  NG     D      F  V G  FD+IVSNPP++ +   D +       +
Sbjct: 106 AGALTQFNAALNGAP--IDVRVGSLFEPVSGESFDLIVSNPPFVIT--PDTVRAGAGFHE 161

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            R   DGG+        +      HL   G   +
Sbjct: 162 YR---DGGMQRDELVGALIRSAPDHLAPGGTLQI 192


>gi|264677180|ref|YP_003277086.1| methyltransferase small [Comamonas testosteroni CNB-2]
 gi|262207692|gb|ACY31790.1| methyltransferase small [Comamonas testosteroni CNB-2]
          Length = 404

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 23/167 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV      +   I    + +  D+G GTG +  ALL +  
Sbjct: 194 GARIHAHYGVFSPVRGEYLDLV------ARASIPAAGIQQAWDIGVGTGVLS-ALLLKRG 246

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D S +AL  A  N    G + R +   +D F+  +G   +IV NPP++     
Sbjct: 247 VKSVVATDTSERALACACENLQRLGHASRVELQHADLFA--QGQAGLIVCNPPWLPGKAA 304

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
             L   + D D R+            R    G++ HL     G   +
Sbjct: 305 SVLDQAIYDEDSRM-----------LRGFLQGLAAHLLPGGEGWLII 340


>gi|19571715|emb|CAD27648.1| AtaP5 protein [Saccharothrix mutabilis subsp. capreolus]
          Length = 228

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 72/223 (32%), Gaps = 37/223 (16%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDF------YNVRLTLSSDTFEPRPETELLVDSAL 86
           ++   L    +R    E         DF            L    F   P T   + +A 
Sbjct: 4   KEPLKLAEETLRRALDEP--------DFPDTFSLLGREWRLHRGVF---PGT---ITAAT 49

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                 +        L++G G+G + +     S   +   VDI+ +A+     NA  +GV
Sbjct: 50  EVMASVLPYPRGGSFLEIGCGSGVIAVTAAL-SGAARVTAVDINDRAVANTAENARFHGV 108

Query: 147 SERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            ++   L  D F +V     FDVI  N P+        +  E+       ++        
Sbjct: 109 EDKVTVLHGDLFEAVPPTDRFDVIFWNVPWTWVPEDFSMSTEL-----HSAVFDPD--YR 161

Query: 205 HYRTIADGVSRHLNKDGLCSVEIG----YNQKVDVVRIFESRK 243
                      HL   G     IG     +Q++ + R+ E R 
Sbjct: 162 AQARFIAEAGAHLADGGRTL--IGTADLADQRL-LERLAEERG 201


>gi|73542384|ref|YP_296904.1| methyltransferase small:ribosomal L11 methyltransferase [Ralstonia
           eutropha JMP134]
 gi|72119797|gb|AAZ62060.1| Methyltransferase small:Ribosomal L11 methyltransferase [Ralstonia
           eutropha JMP134]
          Length = 381

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 21/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +        P     VD      LP           D+G GTG +  A+L      
Sbjct: 173 LDARIHPWYGVFSPVRGEYVDLVANEPLPA-----KTLAFDIGAGTGVLS-AVLARRGVQ 226

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  D+  +AL  A+ N    G  ++ + + +D F   EG   +IV NPP++ +     
Sbjct: 227 RVVATDMDERALACARENIAQLGYDKQVEIITADLFP--EGRAPLIVCNPPWVPARPSSP 284

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
           +   V  +DP  +           R   DG++ HL     G   +
Sbjct: 285 VERAV--YDPDSA---------MLRGFLDGLAAHLEPGGEGWLLL 318


>gi|292489102|ref|YP_003531989.1| hypothetical protein EAMY_2634 [Erwinia amylovora CFBP1430]
 gi|292900224|ref|YP_003539593.1| methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291200072|emb|CBJ47198.1| putative methyltransferase [Erwinia amylovora ATCC 49946]
 gi|291554536|emb|CBA22118.1| Uncharacterized protein yfiC [Erwinia amylovora CFBP1430]
 gi|312173259|emb|CBX81514.1| Uncharacterized protein yfiC [Erwinia amylovora ATCC BAA-2158]
          Length = 245

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +V R LD+G+G+G + L L + +    +   V++   A   A+ N   +   ++ 
Sbjct: 39  WAPVANVQRALDIGSGSGLIALMLAQRTADPVQIDAVELDEAAALQAQENVAASPWPDKV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D   W    E  + +IVSNPPY                +   ++          +
Sbjct: 99  RVQQADIVEWTQRCEHRYSLIVSNPPYFSPGSQCASPQRTAARYTTDLT----------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +       +++DG   V +  +    +V         L     D   ND     RVLL
Sbjct: 149 EVLLGCAGDLIDEDGFFCVILPESTGNKLVERALKHGWHL-RFRTDIADNDMRPPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|312796796|ref|YP_004029718.1| hypothetical protein RBRH_01509 [Burkholderia rhizoxinica HKI 454]
 gi|312168571|emb|CBW75574.1| unnamed protein product [Burkholderia rhizoxinica HKI 454]
          Length = 326

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 22/201 (10%)

Query: 64  RLTLSSDTFE-PRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + + +D F  P  +  L +  +          E      +LD+G G+G + +  L    
Sbjct: 58  PIKVVTDAFHYPHADQVLPIQPEQLFFMDYTSAEDLKQASVLDIGVGSGVLSIFCLLNGA 117

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIE 176
                G+D++ +A  +A  NA+ N + + FD      SD F+SV +  FD I SNPP+  
Sbjct: 118 TSCV-GLDVNPRAKILAGHNAILNHIDKNFDIRDGSTSDIFASVKDKQFDFICSNPPFEP 176

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI---GYNQKV 233
           +     +   V           GI G+     I   ++ HL  DG+  V     G  +K 
Sbjct: 177 T--PPGIDYYVNS-------AAGIYGMDFAEKILSNINPHLTDDGMLQVVTMAPGDAKKP 227

Query: 234 -DVVRIFESR-KLFLVNAFKD 252
             +  I E+      V    D
Sbjct: 228 FKLYEILENHLPGQAVEIILD 248


>gi|261380685|ref|ZP_05985258.1| methyltransferase domain protein [Neisseria subflava NJ9703]
 gi|284796395|gb|EFC51742.1| methyltransferase domain protein [Neisseria subflava NJ9703]
          Length = 371

 Score = 85.1 bits (210), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 31/197 (15%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++ +    F P R E   L+  A           ++    D+GTG+G +  A+L +    
Sbjct: 165 KIHVPFGVFSPLRGEYLDLIAQA-------PLAPNIQTAFDIGTGSGVIA-AILAKRGIP 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  D + KA+  A +N    G+ +  +    D F   E   D+IV NPP++ +     
Sbjct: 217 DIIATDTNPKAIACAIANLERLGLDKAVNIQSIDLFP--ETCADLIVCNPPWLPAKPTSA 274

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV------ 236
           +  E   +DP  +               +GV +HLN +G   + I  +    +       
Sbjct: 275 I--ETALYDPNHA---------MLTAFLNGVRQHLNPNGEAWLIIS-DLAEHLHLRDKDF 322

Query: 237 --RIFESRKLFLVNAFK 251
             + F++  L +V+  K
Sbjct: 323 LNQCFQTASLNIVDILK 339


>gi|323334230|gb|EGA75613.1| Mtq2p [Saccharomyces cerevisiae AWRI796]
          Length = 221

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 12/166 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKE----SPFFK 123
            +EP  ++ L++D  L      ++++   R   + ++G+G+G V   L++          
Sbjct: 14  VYEPAEDSFLILDC-LEKEHDFLKQKFGNRLAIVCEIGSGSGIVTTFLMQNKIIPQENSI 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
            + VDI+  ALE     A  N     F + +Q+D  SS+ +   DV++ NPPY+ +  V 
Sbjct: 73  HLAVDINPWALEATLDTAKLNSCKSSFLEVIQADLNSSIRDNQVDVLIFNPPYVPAECVP 132

Query: 182 CLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     + D  +  +L GG DG++    +   + + L+ DG+  +
Sbjct: 133 DVPGSREEADQWLDLALLGGKDGMAITDKLLRQLEQILSPDGVAYI 178


>gi|297526045|ref|YP_003668069.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
 gi|297254961|gb|ADI31170.1| methyltransferase small [Staphylothermus hellenicus DSM 12710]
          Length = 175

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG GTG V L LL ++   K V +DI+  AL     N   N    R         S +
Sbjct: 14  IDLGCGTGVVGLYLLSKNICSKTVFIDINPVALLNTVYNLKLNYYQHRGLVASISSDSIL 73

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           E  FD++V+NPPY+       +   + D+    SL GG  G        D     L ++G
Sbjct: 74  ENYFDLVVANPPYLPG-----IPENLYDY----SLVGGSGGYEAVLEFIDLAYYFLVENG 124

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLV 247
           +  +      +  ++  + S+K F +
Sbjct: 125 VFYLVYSSLSQPSIIENYLSKKCFRI 150


>gi|225351438|ref|ZP_03742461.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157782|gb|EEG71065.1| hypothetical protein BIFPSEUDO_03033 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 247

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E  +    LDLG G G + L L   SP      +D++ +AL++ + NA  NGV  
Sbjct: 96  LRQAPEPPEEGTFLDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGVRN 155

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                  +  S +   FD+I SNPP    V  D L   +  + PR  L+ G       + 
Sbjct: 156 VHAVTADEIPSDM--TFDLIWSNPPI--RVGKDVLHELLMTWLPR--LNAGGTAYLVVQK 209

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +  S  L      + ++G     +V +   S+   ++   K
Sbjct: 210 --NLGSDSLIP--WLATQLGD--GYEVSKYASSKGFRVIEVMK 246


>gi|288926735|ref|ZP_06420646.1| SAM-dependent methyltransferase [Prevotella buccae D17]
 gi|288336465|gb|EFC74840.1| SAM-dependent methyltransferase [Prevotella buccae D17]
          Length = 228

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 14/133 (10%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ILD+GTGTG + L + +  P     G+DI   A   A+ NA  +  + R +   S
Sbjct: 46  PGGRSILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFAPRIEVAHS 105

Query: 156 DW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                   +S    FD IV NPP+            +++ D R S+    D L     + 
Sbjct: 106 SLAGFVAAASPPLSFDSIVCNPPFFLHS--------LKNPDARRSVARHADSLPFAD-LF 156

Query: 211 DGVSRHLNKDGLC 223
            GV+  L   G+ 
Sbjct: 157 RGVAALLAPSGVF 169


>gi|126209360|ref|YP_001054585.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae L20]
 gi|262827737|sp|A3N3J4|TRMN6_ACTP2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|126098152|gb|ABN74980.1| hypothetical protein APL_1900 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 236

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 18/147 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +    +   +++   A   A  N   +  S+R    Q
Sbjct: 37  RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 96

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIA 210
            D         FD+IVSNPPY    +        R ++  ++       +D L       
Sbjct: 97  GDVLDYHFHQKFDLIVSNPPYFSESLAS------RSYERDLARAATQSHLDWLL------ 144

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               + L + G  S  + +     +V 
Sbjct: 145 -QAKKWLAEQGEISFILPFEAAEKLVE 170


>gi|62181217|ref|YP_217634.1| hypothetical protein SC2647 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128850|gb|AAX66553.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715705|gb|EFZ07276.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 287

 Score = 85.1 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 63  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 122

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 123 TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 172

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 173 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 231

Query: 262 F 262
            
Sbjct: 232 A 232


>gi|312889325|ref|ZP_07748879.1| methyltransferase small [Mucilaginibacter paludis DSM 18603]
 gi|311298202|gb|EFQ75317.1| methyltransferase small [Mucilaginibacter paludis DSM 18603]
          Length = 235

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 21/182 (11%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++  +   ILD+GTGTG + L + ++ P      V++   A + A  N   +  S +   
Sbjct: 30  VKADEPHYILDIGTGTGVIALMMAQKFPGAVIDAVELDTAAAQTAGKNFGNSNFSNKLHV 89

Query: 153 L----QSDWFSSVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                +  +    E  +D+IV+NPP YI S+      + +     +            + 
Sbjct: 90  HPLGFEEYFNHHPEKKYDLIVANPPFYINSLEAAGDKMNLAKHTDQT----------FFE 139

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-----LVNAFKDY-GGNDRVLL 261
            +   VS HL   GLC + +       V ++    +L+      +++F D     + V+L
Sbjct: 140 VLIKAVSAHLASKGLCWLVLPVATASLVKKLILPYQLYVHHTINIHSFTDVDAHREVVVL 199

Query: 262 FC 263
             
Sbjct: 200 GT 201


>gi|262091715|gb|ACY25305.1| 16S RNA G1207 methylase RsmC [uncultured actinobacterium]
          Length = 225

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            N++L      F  +     T++L+D+A                LDLG G+GA+ +AL  
Sbjct: 51  RNLQLVTDRGVFAKKGVDQGTQILLDAA-------PRPSTTGNFLDLGCGSGAIAMALAS 103

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            SP  K   +D++ +AL++   NA  NG+      L     S  +  FD+I SNPP
Sbjct: 104 YSPEAKVWAIDVNARALQLVGENAQRNGLG-NITALFPQSVSP-DIQFDLIWSNPP 157


>gi|315608798|ref|ZP_07883774.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574]
 gi|315249492|gb|EFU29505.1| SAM-dependent methyltransferase [Prevotella buccae ATCC 33574]
          Length = 235

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 14/133 (10%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ILD+GTGTG + L + +  P     G+DI   A   A+ NA  +    R +   S
Sbjct: 33  PGGRSILDIGTGTGLIALMMAQRFPEAHVTGIDIDGDAALQARENAADSPFGPRIEVAHS 92

Query: 156 DW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                   +S    FD IV NPP+    + +    + R    R +     D L     + 
Sbjct: 93  SLAGFVAAASPPLSFDSIVCNPPFFLHSLKN---PDARRSVARHA-----DSLPFAD-LF 143

Query: 211 DGVSRHLNKDGLC 223
            GV+  L   G+ 
Sbjct: 144 RGVAALLAPSGVF 156


>gi|260905515|ref|ZP_05913837.1| hypothetical protein BlinB_09305 [Brevibacterium linens BL2]
          Length = 562

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)

Query: 89  SLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L  +  RD V +  D+GTG G   L L + S   + +  DIS +AL +   +A  NGV 
Sbjct: 172 TLVSLTPRDQVSVSADIGTGCGIQALLLARHSD--RVIATDISERALHLTGLSAELNGVG 229

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              +         +    D++VSNPP++ +   +    E R        D G+ G    R
Sbjct: 230 -NIELRAGSMLEPLHEQVDLLVSNPPFVITPRTNVTTFEYR--------DAGMTGDRLVR 280

Query: 208 TIADGVSRHLNKDGL 222
           ++   +   L   G 
Sbjct: 281 SLFTAIPDSLKPGGR 295


>gi|226307504|ref|YP_002767464.1| hypothetical protein RER_40170 [Rhodococcus erythropolis PR4]
 gi|226186621|dbj|BAH34725.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 372

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 74/192 (38%), Gaps = 26/192 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +        P     VD   +  LP  E        D+GTGTG +  A+L      
Sbjct: 164 LDARVHPAFGVFSPVRGEYVDLVTSAPLPSTESA-----FDIGTGTGVLA-AVLARRGVK 217

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                D   +AL+ A++N    G  ++ + +++D F   EG   ++V NPP+I +     
Sbjct: 218 TVTATDQDPRALQCARTNLSRLGYGDQVNVVEADLFP--EGTAPLVVCNPPWIPA--KAT 273

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG--LCSV----EI-GYNQKVDV 235
             +E   +DP  +           +    GV+ HL+  G     +    E  G   + ++
Sbjct: 274 SPIEYAVYDPAGA---------MLKGFLTGVAAHLDDGGEAWLILSDIAEHLGLRTRSEL 324

Query: 236 VRIFESRKLFLV 247
             +  +  L +V
Sbjct: 325 HDLIAAGGLTVV 336


>gi|300790144|ref|YP_003770435.1| hypothetical protein AMED_8336 [Amycolatopsis mediterranei U32]
 gi|299799658|gb|ADJ50033.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 371

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV +A                 D+GTG+G +  A+L    
Sbjct: 163 GARIHPHYGVFSPVRGEYVDLVAAA--------PLPSSRLAFDIGTGSGVLA-AVLLARG 213

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D+  +AL+ A+ N    G ++R   +++D F    G   ++V NPP++ +   
Sbjct: 214 VDSVVATDLDQRALDCARDNLDRLGFADRVRFVRTDLFPP--GEAPLVVCNPPWLPAKPT 271

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKV 233
             +   V  +DP         G    R   D + +HL     G   +    E  G   + 
Sbjct: 272 SPIEHAV--YDP---------GSRMLRGYLDRLGKHLEPGGEGWLVLSDLAEHLGLRSRA 320

Query: 234 DVVRIFESRKLFLV 247
           D++   ++  L +V
Sbjct: 321 DILEAIDAAGLTVV 334


>gi|227510689|ref|ZP_03940738.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227513705|ref|ZP_03943754.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227083024|gb|EEI18336.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227189810|gb|EEI69877.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 202

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 44/213 (20%)

Query: 46  LKHESI--HR-ILGWRDFYNVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVV 99
           +K E I     +LG     N   T  +  F + R +  + +L+++        +E     
Sbjct: 14  VKSEPITWEYALLGN----NFVFTSDNGVFSKHRVDYGSRVLLENV------DVENIPDG 63

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + LA+ K  P      VD++  AL +A+ NA  NG+S       S+ +S
Sbjct: 64  NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAQANGIS-NVRIFASNSYS 122

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +++  +  IV+NPP             VR             G      +  G   HL  
Sbjct: 123 NIKDNYAAIVTNPP-------------VRA------------GKKVVDDMITGAVSHLKP 157

Query: 220 DGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
           +   +V +   Q      ++            K
Sbjct: 158 NATLTVVLQKKQGAPSAKKLMTKV-FGNCEIVK 189


>gi|332670095|ref|YP_004453103.1| methyltransferase small [Cellulomonas fimi ATCC 484]
 gi|332339133|gb|AEE45716.1| methyltransferase small [Cellulomonas fimi ATCC 484]
          Length = 203

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/162 (27%), Positives = 68/162 (41%), Gaps = 8/162 (4%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +    R+ + +      P+   L    L  + P         +LDLG G G V L+L  E
Sbjct: 24  ELAGRRVQVQTAGGVFSPDHVDLGTQVLLRTAP--PAPAQGDLLDLGCGWGPVALSLALE 81

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           SP  +   VD++ +AL++ + NA   G++     L  D    V   F  I SNPP    V
Sbjct: 82  SPDARVWAVDVNERALDLVRRNAAALGLANVVAALPDDVPDDV--RFATIRSNPPI--RV 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNK 219
             D L   +  + PR +  GG   L   + + AD + R L  
Sbjct: 138 GKDALHTLLLRWLPRRTP-GGDAHLVVGKNLGADSLQRWLAD 178


>gi|227503476|ref|ZP_03933525.1| methyltransferase small [Corynebacterium accolens ATCC 49725]
 gi|227075979|gb|EEI13942.1| methyltransferase small [Corynebacterium accolens ATCC 49725]
          Length = 525

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 92/253 (36%), Gaps = 31/253 (12%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD--FYNVRLTL 67
            L    G      ++D    L D +        +R       H I+G     F +V  +L
Sbjct: 81  LLADALGARLAAKLLDAGVALSDDRGSIYIALDIR------PHIIVGSNRLVFSDVDASL 134

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVG 126
                 P  +  L V +A    L       V  +LDLGTG+G     LL +    +    
Sbjct: 135 VDHV--PGADHVLGVGAASLSLLQSTPVSPVSTVLDLGTGSGVQ---LLGQLECARSITA 189

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            D+  +AL++A +    +G S   + ++  WF  V G  FD IV+NPP++  V +  +G 
Sbjct: 190 TDVHRRALDLAGATVAASGTSTEVELVEGSWFEPVAGRTFDRIVANPPFV--VGIPEVGH 247

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIF 239
             RD    ++LDG          +      HL   G   +        G   +  V    
Sbjct: 248 VYRDSG--LNLDGAS------ELVVSQAVDHLTPGGTAHLLAAWVHTGGQTWQQRVASWL 299

Query: 240 ESRKLFLVNAFKD 252
             + +      +D
Sbjct: 300 PDKGVAAWIIQRD 312


>gi|297159266|gb|ADI08978.1| rRNA or tRNA methyltransferase [Streptomyces bingchenggensis BCW-1]
          Length = 523

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 11/160 (6%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R    L V  A         +  V R LDLGTG+G   L   + +        D + +AL
Sbjct: 147 RSGLVLGVGGASTTLAGLTVRAPVARALDLGTGSGIQALHASRHA--ASVTATDTNPRAL 204

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            IA+     +G +E  D  +   F  V +  +D+IVSNPP++ S         V      
Sbjct: 205 HIARLTLALSGAAEP-DLREGSLFEPVADETYDLIVSNPPFVISPPSSAGDRLVYR---- 259

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
              DGG+ G    RT+    + HL   G C +   +    
Sbjct: 260 ---DGGMSGDDLCRTLVQRSAGHLTDGGWCQLLANWQHVE 296


>gi|284028566|ref|YP_003378497.1| methyltransferase small [Kribbella flavida DSM 17836]
 gi|283807859|gb|ADB29698.1| methyltransferase small [Kribbella flavida DSM 17836]
          Length = 481

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 63/177 (35%), Gaps = 18/177 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W    ++   L       RP+  L +  A    +       V   LDLGTG G   L L 
Sbjct: 114 WWVIADLTPGLDGRRATMRPDYVLGIAPASLSLVKLTVPLKVESALDLGTGCGIQALHLA 173

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
             +     V  D++ +AL++ +  A  N +    D      +  V G  FD+IVSNPPY+
Sbjct: 174 DRANHL--VATDVNPRALQLTRWTAALNRIE--LDVRDGSLYEPVAGQRFDLIVSNPPYV 229

Query: 176 --ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                       E            G  G S    +     +HL + G C +   + 
Sbjct: 230 IAPPSDGKLTYRET-----------GFAGDSVVEQLVRQAPQHLTEGGWCQLLANWT 275


>gi|167033975|ref|YP_001669206.1| methyltransferase small [Pseudomonas putida GB-1]
 gi|166860463|gb|ABY98870.1| methyltransferase small [Pseudomonas putida GB-1]
          Length = 461

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W   ++   T+++D     P++      AL   L R +  ++   +++G+GTG   + + 
Sbjct: 114 WTFLHSGYPTVAADAVFFGPDSYRFA-HALQAHLQR-DTGEIRHAVEIGSGTGIGAIVIA 171

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 + + VDI+  AL     N    G +       SD    V G FD+IV+NPPY+ 
Sbjct: 172 TARRSARVMAVDINDLALRYTAINVALAGHA-NVSVKHSDVLQDVTGTFDLIVANPPYM- 229

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
              +D      R         GG+ G      I +     L   G   +  G
Sbjct: 230 ---LDASERTYRH-------GGGVSGEGLSLRIIEESLPRLAAGGFLLLYTG 271


>gi|124385094|ref|YP_001027712.1| hypothetical protein BMA10229_A1732 [Burkholderia mallei NCTC
           10229]
 gi|254201398|ref|ZP_04907762.1| putative methyltransferase [Burkholderia mallei FMH]
 gi|124293114|gb|ABN02383.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|147747292|gb|EDK54368.1| putative methyltransferase [Burkholderia mallei FMH]
          Length = 396

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   +  + G R      +      F P R E   LV         R          +
Sbjct: 177 RKKGVPLAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 222

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 223 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 279

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 280 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 328

Query: 222 LCSV 225
              +
Sbjct: 329 WLIL 332


>gi|15790238|ref|NP_280062.1| hypothetical protein VNG1163G [Halobacterium sp. NRC-1]
 gi|169235967|ref|YP_001689167.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1]
 gi|10580698|gb|AAG19542.1| protoporphyrinogen oxidase [Halobacterium sp. NRC-1]
 gi|167727033|emb|CAP13819.1| protein N5-glutamine methyltransferase [Halobacterium salinarum R1]
          Length = 191

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 22/184 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            +D ++P  +T LL  +A+             R+LD+GTG+G V   +  E+     VG 
Sbjct: 11  GADVYQPAEDTHLLATAAVGEL-----DDPYARVLDVGTGSGYVAATVRDET-GADVVGT 64

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           D++  A+  A               ++ D  +   +  FD +V NPPY+          +
Sbjct: 65  DLNPFAVRQAA--------DRGVPVVRGDLVAPFRDDAFDAVVFNPPYLPRED------D 110

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFESRKLF 245
            RD    ++L GG  G     +  D V R L  DG+  + +     VD V      R   
Sbjct: 111 TRDDWMDVALSGGDTGRRVIESFFDAVGRVLAPDGVVIMLVSTLTGVDEVAAYAGDRGFS 170

Query: 246 LVNA 249
               
Sbjct: 171 AAAI 174


>gi|217424809|ref|ZP_03456306.1| putative methyltransferase [Burkholderia pseudomallei 576]
 gi|254300708|ref|ZP_04968153.1| putative methyltransferase [Burkholderia pseudomallei 406e]
 gi|157810542|gb|EDO87712.1| putative methyltransferase [Burkholderia pseudomallei 406e]
 gi|217392265|gb|EEC32290.1| putative methyltransferase [Burkholderia pseudomallei 576]
          Length = 378

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|299530724|ref|ZP_07044139.1| methyltransferase small [Comamonas testosteroni S44]
 gi|298721240|gb|EFI62182.1| methyltransferase small [Comamonas testosteroni S44]
          Length = 404

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 63/167 (37%), Gaps = 23/167 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV      +   I    + +  D+G GTG +  ALL +  
Sbjct: 194 GARIHAHYGVFSPVRGEYLDLV------ARASIPAAGLEQAWDIGVGTGVLS-ALLLKRG 246

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D S +AL  A  N    G + R +   +D F+  +G   +IV NPP++     
Sbjct: 247 VKSVVATDTSERALACACENLQRLGHASRVELQHADLFA--QGQAGLIVCNPPWLPGKAA 304

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
             L   + D D R+            R    G++ HL     G   +
Sbjct: 305 SVLDQAIYDEDSRM-----------LRGFLQGLAAHLLPGGEGWLII 340


>gi|297582376|ref|YP_003698156.1| methyltransferase small [Bacillus selenitireducens MLS10]
 gi|297140833|gb|ADH97590.1| methyltransferase small [Bacillus selenitireducens MLS10]
          Length = 241

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 70/192 (36%), Gaps = 23/192 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I K+   RI+DL +GTGAV L ++ E        ++I    + +++   
Sbjct: 26  MDAVLLGKFATITKK-TGRIIDLCSGTGAVPL-VMSERTNAAIDAIEIQEALVTMSRKTM 83

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLE----VRDFDPR 193
             NGVSER      D   +        FD++  NPPY +      L       V   +  
Sbjct: 84  AINGVSERVTIHHGDVSDAGAVVPWNRFDLVTCNPPYFKVTEDADLDGHDPFVVARHEVH 143

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AF 250
           +SL            + +   + L   G  ++     +  D+    E+++          
Sbjct: 144 LSL----------EVMIETAKKLLKSKGRLAMVHRPERTGDIFAALEAQRFQAKRMQFVH 193

Query: 251 KDYGGNDRVLLF 262
            D      ++L 
Sbjct: 194 PDQSREANMVLI 205


>gi|227522505|ref|ZP_03952554.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227090327|gb|EEI25639.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 202

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 44/213 (20%)

Query: 46  LKHESI--HR-ILGWRDFYNVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVV 99
           +K E I     +LG     N   T  +  F + R +  + +L+++        +E     
Sbjct: 14  VKSEPITWEYALLGN----NFVFTSDNGVFSKHRVDYGSRVLLENV------DVENIPDG 63

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ILD+GTG G + LA+ K  P      VD++  AL +A+ NA  NG+S       S+ +S
Sbjct: 64  NILDMGTGYGPIGLAIAKIQPDRVVDMVDVNEIALALAEKNAKANGIS-NVRIFASNSYS 122

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +++  +  IV+NPP             VR             G      +  G   HL  
Sbjct: 123 NIKDNYAAIVTNPP-------------VRA------------GKKVVDDMITGAVSHLKP 157

Query: 220 DGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
           +   +V +   Q      ++            K
Sbjct: 158 NATLTVVLQKKQGAPSAKKLMTKV-FGNCEIVK 189


>gi|224498901|ref|ZP_03667250.1| hypothetical protein LmonF1_04038 [Listeria monocytogenes Finland
           1988]
          Length = 201

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++  +   +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNTY-IYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL ++G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQENGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|319936707|ref|ZP_08011120.1| methyltransferase [Coprobacillus sp. 29_1]
 gi|319808264|gb|EFW04829.1| methyltransferase [Coprobacillus sp. 29_1]
          Length = 244

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 80/197 (40%), Gaps = 24/197 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + ++++    D F    +T LL       S      +D+ +I+D GT   A+ L LL   
Sbjct: 12  YNDMKIIQRKDMFNFSLDTVLL-------SSFCTINKDLHKIIDFGTNNAAIPL-LLSRR 63

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
              + +G++I   A+++A  N   N +  +   + +D    V+    F +IV NPP+ + 
Sbjct: 64  TDKEIIGIEIQKDAVDLAIKNVKLNHLENQITIIHNDIKDYVQTSEKFKLIVCNPPFFKV 123

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                +       +   + +I+LD           I    +R L+  G  ++    ++ +
Sbjct: 124 GERSHINENEYLQIARHEIKINLD----------EIIQSAARILDNKGRFAMVHRPDRMI 173

Query: 234 DVVRIFESRKLFLVNAF 250
           +++ I +   +      
Sbjct: 174 EIINIMQKYDIEPKRIR 190


>gi|76810643|ref|YP_334983.1| methyltransferase small domain-containing protein [Burkholderia
           pseudomallei 1710b]
 gi|76580096|gb|ABA49571.1| Methyltransferase small domain family [Burkholderia pseudomallei
           1710b]
          Length = 425

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 206 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 251

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 252 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 308

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 309 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 357

Query: 222 LCSV 225
              +
Sbjct: 358 WLIL 361


>gi|253582135|ref|ZP_04859359.1| methyltransferase [Fusobacterium varium ATCC 27725]
 gi|251836484|gb|EES65021.1| methyltransferase [Fusobacterium varium ATCC 27725]
          Length = 244

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 82/190 (43%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++   +D F    ++ L+ + A          ++   I+DLGTG GA+ L L K++  
Sbjct: 16  DMKIIQRTDHFAFSLDSLLISEFASIT-------KNTNNIVDLGTGNGAIPLFLSKKTK- 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI-- 175
            K  G++I   +  +A+ N   N +  +   +  D  +  +       D++VSNPP+   
Sbjct: 68  AKITGIEIQEISSNLARRNVKLNNLENQITIINDDMKNWRKYFTTHTLDMVVSNPPFFKF 127

Query: 176 ---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              E ++ D   L +   +  I+LD          T+ +  S  L   G   +    ++ 
Sbjct: 128 NGNEELLNDLTQLTLARHEISITLD----------TLIETASALLKDKGYFVLVHRVDRL 177

Query: 233 VDVVRIFESR 242
           ++++ I +  
Sbjct: 178 IEIIEIMKKH 187


>gi|313620910|gb|EFR92088.1| methyltransferase [Listeria innocua FSL S4-378]
          Length = 143

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 39/168 (23%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +S 
Sbjct: 1   KIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYESS 59

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            + +V    +  I+SNPP                            G      I +G   
Sbjct: 60  VYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGAYD 94

Query: 216 HLNKDGLCSVEIGYNQK------------VDVVRIFESRKLFLVNAFK 251
           HL + G   + I   Q              +V  +   +  F+  + K
Sbjct: 95  HLRETGELWIVIQKKQGGPSAEKKMEEVFGNVETVARDKGYFIFRSVK 142


>gi|261868483|ref|YP_003256405.1| 16S ribosomal RNA m2G1207 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293390498|ref|ZP_06634832.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413815|gb|ACX83186.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290951032|gb|EFE01151.1| ribosomal RNA small subunit methyltransferase C [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 334

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + + ++   +    P   +   +D   A  L  ++      +LD+G G G +   + 
Sbjct: 155 WKSYQSPQIADLTIYALPGVFSAAELDGGTALLLSTLKNI-AGEVLDVGCGAGVIGSYIQ 213

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           + +P  + +  DI   AL  AK     N +      + SD FS V+G FD+I+SNPP+ +
Sbjct: 214 RHNPNTRLIMTDIHALALASAKRTLQENRLQG--TVVASDVFSHVDGKFDLIISNPPFHD 271

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +      +                       +      HL   G  
Sbjct: 272 GIDTAYTAVN---------------------ELIKQAKWHLKPGGEL 297


>gi|294787522|ref|ZP_06752775.1| putative methyltransferase small domain protein [Parascardovia
           denticolens F0305]
 gi|315226897|ref|ZP_07868685.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105]
 gi|294484878|gb|EFG32513.1| putative methyltransferase small domain protein [Parascardovia
           denticolens F0305]
 gi|315121029|gb|EFT84161.1| 16S rRNA methyltransferase [Parascardovia denticolens DSM 10105]
          Length = 250

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +L+      +    E   V   LDLG G G + LAL +E P      +D++ +A+E+ 
Sbjct: 46  TRVLLKEVPGRAADEAEGHRVKNCLDLGCGWGPISLALAREYPQATVWALDVNERAVELT 105

Query: 138 KSNAVTNGV----SERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           K+NA  N V    +   ++L +D+  + E   FD+I SNPP    V  + L   +  +  
Sbjct: 106 KANARRNHVASVQAGTAESLAADYGQAWEEARFDLIWSNPPI--RVGKEELHALLSTYLT 163

Query: 193 RISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           R++ +GG   L   + + AD +   L +          +    V +   ++   ++   +
Sbjct: 164 RLA-EGGYAYLVVQKNLGADSLVPWLAQ--------HLDDHFSVRKKASAKGYRVIEVHR 214


>gi|260439407|ref|ZP_05793223.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus
           DSM 2876]
 gi|292808203|gb|EFF67408.1| putative N-6 adenine-specific DNA methylase [Butyrivibrio crossotus
           DSM 2876]
          Length = 245

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  ++ + D  ++LDL TG G + + L   +   +  G++I    +++AK + 
Sbjct: 32  IDAVLLCSFTKVNEGD--KVLDLCTGNGVIPILLKGRTKGSRFSGLEIQDINVDMAKRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             NG+ E  D ++ D   +     E  FDV+  NPPY+           +++ D   ++ 
Sbjct: 90  EYNGIGEFVDIVKGDVKEASGIFGEASFDVVTCNPPYMNEN------HGLKNPDSHKAIA 143

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                L     +    ++ L   G  ++     +  +++ I E  KL      
Sbjct: 144 RHEI-LCTLEDVVREGAKVLKPGGRFNMVHRPQRLTEIIGIMEKYKLQPKRIR 195


>gi|254386203|ref|ZP_05001514.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1]
 gi|194345059|gb|EDX26025.1| rRNA or tRNA methyltransferase [Streptomyces sp. Mg1]
          Length = 512

 Score = 84.8 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 16/139 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V   LDLGTG+G   L     +   +    D++ +ALE  +     +G  E  + L   
Sbjct: 164 PVATALDLGTGSGIQALHAAHHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGS 220

Query: 157 WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            F  V +  +D+IVSNPP++ S                   DGG+ G    RT+      
Sbjct: 221 LFEPVGDATYDLIVSNPPFVISPGARLTYR-----------DGGMSGDDLCRTLVQEAGA 269

Query: 216 HLNKDGLCSVEIGYNQKVD 234
           HLN  G     +G  Q V+
Sbjct: 270 HLNPGGYAQF-LGNWQHVE 287


>gi|242277527|ref|YP_002989656.1| methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
 gi|242120421|gb|ACS78117.1| Methyltransferase type 11 [Desulfovibrio salexigens DSM 2638]
          Length = 241

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 65/174 (37%), Gaps = 20/174 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +R        +P+       DS L  S   +  +   R+LDLGTG+G + L ++   
Sbjct: 2   FEEIRNYFPRGLVQPQSGFRFSTDSLLISSFVSVPSQ--ARVLDLGTGSGVIPLGIMLRH 59

Query: 120 PF--FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPY 174
           P       G++I+   +  A+ N    G +E    +Q +  +      G +D++VSNPPY
Sbjct: 60  PDKGLNITGLEINSDMVAAAEENVQKLGFAEEIGIVQGNVCTPDFAPAGSYDLVVSNPPY 119

Query: 175 IESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      E R+   F+    LD                SR +   G    
Sbjct: 120 RSEGRGKACPDEDRNKARFEIDCDLDA----------FVATASRMVRNRGRVCF 163


>gi|6320344|ref|NP_010424.1| Mtq2p [Saccharomyces cerevisiae S288c]
 gi|74676352|sp|Q03920|MTQ2_YEAST RecName: Full=eRF1 methyltransferase catalytic subunit MTQ2;
           Short=eRF1 MTase catalytic subunit MTQ2; AltName:
           Full=N(5)-glutamine methyltransferase MTQ2
 gi|665673|emb|CAA88222.1| unknown [Saccharomyces cerevisiae]
 gi|45269245|gb|AAS56002.1| YDR140W [Saccharomyces cerevisiae]
 gi|151942124|gb|EDN60480.1| methyltransferase [Saccharomyces cerevisiae YJM789]
 gi|190404901|gb|EDV08168.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
 gi|207346679|gb|EDZ73106.1| YDR140Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256274421|gb|EEU09324.1| Mtq2p [Saccharomyces cerevisiae JAY291]
 gi|259145381|emb|CAY78645.1| Mtq2p [Saccharomyces cerevisiae EC1118]
 gi|285811159|tpg|DAA11983.1| TPA: Mtq2p [Saccharomyces cerevisiae S288c]
 gi|323305651|gb|EGA59392.1| Mtq2p [Saccharomyces cerevisiae FostersB]
 gi|323338288|gb|EGA79519.1| Mtq2p [Saccharomyces cerevisiae Vin13]
 gi|323349311|gb|EGA83538.1| Mtq2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323355726|gb|EGA87542.1| Mtq2p [Saccharomyces cerevisiae VL3]
          Length = 221

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKE----SPFFK 123
            +EP  ++ L++D  L      ++++   R   + ++G+G+G V   L++          
Sbjct: 14  VYEPAEDSFLILDC-LEKEHDFLKQKFGNRLAIVCEIGSGSGIVTTFLMQNKIIPQENSI 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
            + VDI+  ALE     A  N     F + +Q+D  SS+     DV++ NPPY+ +  V 
Sbjct: 73  HLAVDINPWALEATLDTAKLNSCKSSFLEVIQADLNSSIRNNQVDVLIFNPPYVPAECVP 132

Query: 182 CLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     + D  +  +L GG DG++    +   + + L+ DG+  +
Sbjct: 133 DVPGSREEADQWLDLALLGGKDGMAITDKLLRQLEQILSPDGVAYI 178


>gi|319948430|ref|ZP_08022568.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4]
 gi|319437912|gb|EFV92894.1| hypothetical protein ES5_03648 [Dietzia cinnamea P4]
          Length = 474

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/161 (28%), Positives = 69/161 (42%), Gaps = 15/161 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A    L          +LD+GTG G   +  L  +      G DI+ + L
Sbjct: 79  RPDHVLGVGQATLSLLRVTPTSPTGSVLDVGTGCGVQMVHALGTADSA--TGTDITPRCL 136

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A +    N +  R + L+  WF  V G  FD IV+NPP++  V     G   R  +  
Sbjct: 137 ELAAATLAINDL--RAELLRGSWFEPVAGRRFDRIVANPPFV--VGPPETGHSYR--ESG 190

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           ++LDG        RT+  G   HL   G   +   + ++ D
Sbjct: 191 LALDGAS------RTVVSGAPEHLADGGTAVMLASWVERED 225


>gi|194017752|ref|ZP_03056362.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC
           7061]
 gi|194010652|gb|EDW20224.1| ribosomal protein L11 methyltransferase [Bacillus pumilus ATCC
           7061]
          Length = 311

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 72/219 (32%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHSDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++   ++D+GTG+G + +A             D+   A+E AK N   NGVSE+    
Sbjct: 172 YVKENDTVIDVGTGSGILSVAAAMVGAK-DIQAFDLDTVAVESAKQNIELNGVSEQVTVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++               D  
Sbjct: 231 QNNLLDGISGERDVIVAN---------------------ILA--------EVILRFTDQA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L KDG       IG  +K+ V    E     +V   
Sbjct: 262 YDLLKKDGYFITSGIIG-QKKLQVKTALEEAGFDIVEVL 299


>gi|47093869|ref|ZP_00231611.1| modification methylase, HemK family [Listeria monocytogenes str. 4b
           H7858]
 gi|47017743|gb|EAL08534.1| modification methylase, HemK family [Listeria monocytogenes str. 4b
           H7858]
          Length = 113

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 32/86 (37%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           +   L    GLS  ++ ++    L+            R L  E +  IL    FY     
Sbjct: 25  AEILLETRMGLSRSELWMEISRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFL 84

Query: 67  LSSDTFEPRPETELLVDSALAFSLPR 92
           ++ D   PRPETE LV  A  F    
Sbjct: 85  VTEDVLIPRPETEELVACAEDFLKKH 110


>gi|184201225|ref|YP_001855432.1| putative methyltransferase [Kocuria rhizophila DC2201]
 gi|183581455|dbj|BAG29926.1| putative methyltransferase [Kocuria rhizophila DC2201]
          Length = 218

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 19/197 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V++  ++  F P       +D   A  L  +   +   +LD+G G G + +AL + +P
Sbjct: 31  RHVQVGTAAGVFSPGD-----LDRGTAALLRSVPDPEGRELLDIGCGWGPLTIALAQAAP 85

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD++ ++L +   NA   G+S     L  D  +     FD I SNPP    V  
Sbjct: 86  EARVTAVDVNERSLRLTAENAAALGLSGVEALLPGDVPAG--RTFDTIWSNPPI--RVGK 141

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           D L   +  + PR+S  GG   L   + +  D + R L         +G +    V R  
Sbjct: 142 DALHEILATWLPRLSP-GGTAWLVVQKNLGGDSLQRWLAAT------LGADF--AVRRAA 192

Query: 240 ESRKLFLVNAFKDYGGN 256
             +   ++   +D   +
Sbjct: 193 TDKGFRILTVHRDPASH 209


>gi|150403488|ref|YP_001330782.1| methyltransferase small [Methanococcus maripaludis C7]
 gi|150034518|gb|ABR66631.1| methyltransferase small [Methanococcus maripaludis C7]
          Length = 200

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 71/215 (33%), Gaps = 44/215 (20%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +  IL  + F           F P+     T +LV+         +E      +LD+G G
Sbjct: 17  VSGILRGKKF---SFNTDRGVFSPKKIDKGTIILVEE--------LELSKSDDVLDVGCG 65

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLF 165
            G + ++++ E         D++ +++ + + N   NG SE   +  Q D +  V+   +
Sbjct: 66  YGVIGISIVDEVN--SVTMTDVNNRSVSLTRKNVKLNGKSEKNIEVFQGDLYEKVKNKKY 123

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +I+SNPP                            G      I       LN++G   V
Sbjct: 124 SLIISNPPI-------------------------KAGKELIHKIISEGHDLLNENGSIWV 158

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
            I        +  F       V       G  RVL
Sbjct: 159 VIQTKHGAKSLTKFMEEIYGNVETVT-ISGGYRVL 192


>gi|126455020|ref|YP_001067862.1| putative methyltransferase [Burkholderia pseudomallei 1106a]
 gi|167721425|ref|ZP_02404661.1| hypothetical protein BpseD_20615 [Burkholderia pseudomallei DM98]
 gi|167817608|ref|ZP_02449288.1| hypothetical protein Bpse9_20891 [Burkholderia pseudomallei 91]
 gi|167826010|ref|ZP_02457481.1| hypothetical protein Bpseu9_20234 [Burkholderia pseudomallei 9]
 gi|167847498|ref|ZP_02473006.1| hypothetical protein BpseB_19644 [Burkholderia pseudomallei B7210]
 gi|167896086|ref|ZP_02483488.1| hypothetical protein Bpse7_20243 [Burkholderia pseudomallei 7894]
 gi|167912733|ref|ZP_02499824.1| hypothetical protein Bpse112_19751 [Burkholderia pseudomallei 112]
 gi|167920693|ref|ZP_02507784.1| hypothetical protein BpseBC_19251 [Burkholderia pseudomallei
           BCC215]
 gi|226198212|ref|ZP_03793783.1| putative methyltransferase [Burkholderia pseudomallei Pakistan 9]
 gi|242315592|ref|ZP_04814608.1| putative methyltransferase [Burkholderia pseudomallei 1106b]
 gi|254198534|ref|ZP_04904955.1| putative methyltransferase [Burkholderia pseudomallei S13]
 gi|126228662|gb|ABN92202.1| putative methyltransferase [Burkholderia pseudomallei 1106a]
 gi|169655274|gb|EDS87967.1| putative methyltransferase [Burkholderia pseudomallei S13]
 gi|225929732|gb|EEH25748.1| putative methyltransferase [Burkholderia pseudomallei Pakistan 9]
 gi|242138831|gb|EES25233.1| putative methyltransferase [Burkholderia pseudomallei 1106b]
          Length = 378

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|326382339|ref|ZP_08204031.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
 gi|326199069|gb|EGD56251.1| putative methyltransferase [Gordonia neofelifaecis NRRL B-59395]
          Length = 247

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 59/162 (36%), Gaps = 14/162 (8%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R+T ++  + P  ++ LL    +A  L       +  +++L  G+G   +         +
Sbjct: 25  RITTAAGVYRPSTDSALLCSRMVAELLDVSS--PIGTVIELCAGSGIASVYAASA--GAR 80

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              +D +  A    ++NA  NGV              +    D++V+NPPY+ +      
Sbjct: 81  VTAIDDTAAAERAVRANASANGVMVDVVRADVRNLPPLPA-ADLVVANPPYVPAPPTAP- 138

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   P  + + G DG      +   + R +   G   +
Sbjct: 139 --------PGHAWNAGPDGRDVLDAMIAVLPRLVRPGGRAII 172


>gi|239943101|ref|ZP_04695038.1| putative methyltransferase [Streptomyces roseosporus NRRL 15998]
 gi|239989559|ref|ZP_04710223.1| putative methyltransferase [Streptomyces roseosporus NRRL 11379]
 gi|291446578|ref|ZP_06585968.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL
           15998]
 gi|291349525|gb|EFE76429.1| rRNA or tRNA methyltransferase [Streptomyces roseosporus NRRL
           15998]
          Length = 511

 Score = 84.4 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +   +    D++ +ALE  +     +G +   D  +
Sbjct: 159 RTPVASALDLGTGSGIQALHAAQHA--TRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 215

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP++ S                   DGG+ G    RT+    
Sbjct: 216 GSLFEPVGSDTFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQA 264

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
             HLN+ G       +    
Sbjct: 265 GDHLNEGGYAQFLANWQHVE 284


>gi|284050038|ref|ZP_06380248.1| methyltransferase small [Arthrospira platensis str. Paraca]
 gi|291565725|dbj|BAI87997.1| putative methyltransferase [Arthrospira platensis NIES-39]
          Length = 236

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 13/137 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + + V  ILD+GTG+G + L L + SP  K   V+I   A   A  N   +    R  
Sbjct: 32  WTDVKSVDNILDIGTGSGLIALILAQRSP-AKIDAVEIDRDAYIQASENIANSPWRSRLK 90

Query: 152 TLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +    +    +  +D+I+SNPP+  +                I+L    D LS    
Sbjct: 91  IHHNSIQQYADFCDIQYDLIISNPPFFANAYKPNNHQ--------IALAKHSDSLSQLD- 141

Query: 209 IADGVSRHLNKDGLCSV 225
           I    ++ L   G  ++
Sbjct: 142 ILQVTTKLLKPTGKLAI 158


>gi|18977219|ref|NP_578576.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638]
 gi|18892878|gb|AAL80971.1| hypothetical protein PF0847 [Pyrococcus furiosus DSM 3638]
          Length = 248

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 10/159 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R     L++GTG  A+   + ++    K    ++  +  E A+ N   N  + R      
Sbjct: 79  RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG 138

Query: 156 DWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                 VEG FDVI S PPY +  +   L         R ++ GG  G      + +   
Sbjct: 139 GIIKGVVEGTFDVIFSAPPYYDKPLGRVLTE-------REAIGGGKYGEEFSVKLLEEAF 191

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            HLN  G  ++ +    K  ++ + + R + L  + KD 
Sbjct: 192 DHLNPGGKVALYLPD--KEKLLNVIKERGIKLGYSVKDI 228


>gi|323309835|gb|EGA63039.1| Mtq2p [Saccharomyces cerevisiae FostersO]
          Length = 221

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 12/166 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKE----SPFFK 123
            +EP  ++ L++D  L      ++++   R   + ++G+G+G V   L++          
Sbjct: 14  VYEPAEDSFLILDC-LEKEHDFLKQKFGNRLAIVCEIGSGSGIVTTFLMQNKIIPQENSI 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
            + VDI+  ALE     A  N     F + +Q+D  SS+     DV++ NPPY+ +  V 
Sbjct: 73  HLAVDINPWALEATLDTAKLNSCKSSFLEVIQADLNSSIRNNQVDVLIFNPPYVPAECVP 132

Query: 182 CLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +     + D  +  +L GG DG++    +   + + L+ DG+  +
Sbjct: 133 DVPGSREEADQWLDLALLGGKDGMAITDKLLRQLEQILSPDGVAYI 178


>gi|237813995|ref|YP_002898446.1| putative methyltransferase [Burkholderia pseudomallei MSHR346]
 gi|237503256|gb|ACQ95574.1| putative methyltransferase [Burkholderia pseudomallei MSHR346]
          Length = 378

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R     +    +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSMSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|254180473|ref|ZP_04887071.1| putative methyltransferase [Burkholderia pseudomallei 1655]
 gi|184211012|gb|EDU08055.1| putative methyltransferase [Burkholderia pseudomallei 1655]
          Length = 378

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|152982224|ref|YP_001353635.1| hypothetical protein mma_1945 [Janthinobacterium sp. Marseille]
 gi|151282301|gb|ABR90711.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 368

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   L+  A                 D+GTGTG +  ALL +  
Sbjct: 161 GARIHPYYGVFSPVRGEYLNLIAEA--------PLPSKKLAFDIGTGTGVIA-ALLAQRG 211

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             K V  +   +AL  AK N +   + +R   L++D F +  G   +IV NPP+I +   
Sbjct: 212 VEKVVATEQDVRALACAKENLLRLDLRDRVQVLEADLFPA--GKAPLIVCNPPWIPARPS 269

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSV----EI-GYNQKV 233
             +  E   +DP              R   +G++ HL    +G   +    E  G   + 
Sbjct: 270 SAI--EYAIYDPDS---------RMLRGFLNGLAAHLEAKGEGWLILSDLAEHLGLRTRD 318

Query: 234 DVVRIFESRKLFLV 247
           +++++ ++  L ++
Sbjct: 319 ELLQMIDTAGLKVI 332


>gi|224475689|ref|YP_002633295.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420296|emb|CAL27110.1| putative rRNA methylase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 201

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 64/173 (36%), Gaps = 30/173 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L   L          I+D+G G G + L + K SP  K + +D++ +AL++AK N+ 
Sbjct: 46  DLLLRTFLKEHPPGPSKTIIDVGCGYGPIGLMIAKVSPHHKVILLDVNHRALDLAKENSE 105

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +       +SD  + + +   D+IV+NPP                            
Sbjct: 106 KNHIDNAV-IQESDGLAEIPDDSADMIVTNPPIRA------------------------- 139

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAF-KD 252
           G S    I +     L KDG   V I   Q      +  E+     V    KD
Sbjct: 140 GKSVVHGILEDAYSKLKKDGELYVVIQKKQGMPSAKKKMEAV-FGNVETLAKD 191


>gi|289577354|ref|YP_003475981.1| methyltransferase small [Thermoanaerobacter italicus Ab9]
 gi|289527067|gb|ADD01419.1| methyltransferase small [Thermoanaerobacter italicus Ab9]
          Length = 248

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 24/178 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +    +K D  +I+DLG GTG + + +  ++      GV+I     ++A  + 
Sbjct: 29  MDAVLLANFVTAKKGD--KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSV 86

Query: 142 VTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIE---SVIVDCLGLEVRDFDPR 193
           V N + +R   +Q D    +E       FD++ SNPPY+              +  ++  
Sbjct: 87  VINNMEKRIKIIQGDV-RGIEKTLGYEKFDIVTSNPPYMPVKAGFDKKRKSENIARYE-- 143

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             + GG              S+ L   G   +     +   +V I    + + +   K
Sbjct: 144 --IYGG------LEEFIKAASKLLKFGGKFFMVH---RAERLVDILYFLRKYNLEPKK 190


>gi|262831286|sp|Q57L59|TRMN6_SALCH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 263

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|218884715|ref|YP_002429097.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis
           1221n]
 gi|218766331|gb|ACL11730.1| Predicted rRNA or tRNA methylase [Desulfurococcus kamchatkensis
           1221n]
          Length = 193

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 16/177 (9%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +   LV   L    PR +       +DLG G+G + L  L +    K + +DI   AL 
Sbjct: 5   SDDSWLVVKLLDSIKPRAD-----LCMDLGCGSGVLGLHALLKGYCEKVIFIDIDEDALN 59

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             + N V N  + +   L SD   S+ E   D++++NPPY+ +                I
Sbjct: 60  TVRENTVLNNAAGKNIILSSDTGISIKESSIDLVLANPPYLPAWSGSIED---------I 110

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVNAF 250
           + +GG  G        +     L   GL  +     +  + V      +    V + 
Sbjct: 111 ATEGGAHGYEAILYFINVAWYVLKPGGLLVLVYSSLSNPLVVEEYLSKKGFSRVASI 167


>gi|163791692|ref|ZP_02186086.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7]
 gi|159873040|gb|EDP67150.1| hypothetical protein CAT7_03769 [Carnobacterium sp. AT7]
          Length = 201

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 76/215 (35%), Gaps = 51/215 (23%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             L  ++F   +    +  F  +     + LL+++                +LD+G G G
Sbjct: 21  YTLRGQEF---KFVTDAGVFSKKTVDFGSRLLIEAF------DFSGMIPGDLLDVGCGYG 71

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVI 168
            + LAL K+ P  K   VD++ +AL +AK NA  N +S       SD + SV G  F  I
Sbjct: 72  PMGLALAKDDPERKVEMVDVNERALGLAKQNASNNRLS-NVLIHTSDIYESVVGKDFAAI 130

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPP                            G      I  G    L K G  ++ I 
Sbjct: 131 VSNPPIRA-------------------------GKEVVHGILTGAFELLKKGGTLTIVIQ 165

Query: 229 YNQK-----VDVVRIF-------ESRKLFLVNAFK 251
             Q        +   F       + +  +++ + K
Sbjct: 166 KKQGAPSAKAKMEETFGNAQVMVKDKGYWIIQSVK 200


>gi|53723955|ref|YP_104327.1| hypothetical protein BMA2811 [Burkholderia mallei ATCC 23344]
 gi|67640666|ref|ZP_00439464.1| putative methyltransferase [Burkholderia mallei GB8 horse 4]
 gi|121599904|ref|YP_991386.1| hypothetical protein BMASAVP1_A0034 [Burkholderia mallei SAVP1]
 gi|126450783|ref|YP_001082684.1| putative methyltransferase [Burkholderia mallei NCTC 10247]
 gi|167001391|ref|ZP_02267190.1| putative methyltransferase [Burkholderia mallei PRL-20]
 gi|254174975|ref|ZP_04881636.1| putative methyltransferase [Burkholderia mallei ATCC 10399]
 gi|254206741|ref|ZP_04913092.1| putative methyltransferase [Burkholderia mallei JHU]
 gi|254357230|ref|ZP_04973504.1| putative methyltransferase [Burkholderia mallei 2002721280]
 gi|52427378|gb|AAU47971.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|121228714|gb|ABM51232.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|126243653|gb|ABO06746.1| putative methyltransferase [Burkholderia mallei NCTC 10247]
 gi|147752283|gb|EDK59349.1| putative methyltransferase [Burkholderia mallei JHU]
 gi|148026294|gb|EDK84379.1| putative methyltransferase [Burkholderia mallei 2002721280]
 gi|160696020|gb|EDP85990.1| putative methyltransferase [Burkholderia mallei ATCC 10399]
 gi|238521429|gb|EEP84880.1| putative methyltransferase [Burkholderia mallei GB8 horse 4]
 gi|243062808|gb|EES44994.1| putative methyltransferase [Burkholderia mallei PRL-20]
          Length = 378

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   +  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPLAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|327268617|ref|XP_003219093.1| PREDICTED: hemK methyltransferase family member 2-like [Anolis
           carolinensis]
          Length = 173

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 11/169 (6%)

Query: 102 LDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWF 158
           L++G G+G V   +     P    +  DI+  A       A+ N V+ +     L     
Sbjct: 9   LEVGCGSGVVSTFVASVIGPKALYLCTDINPLAALCTVETALCNNVNIQPIITDLTVGLL 68

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             + G  D+++ NPPY+ +        E+++     +  GG +G      +   V   L+
Sbjct: 69  PRLHGKVDLLLFNPPYVVTP-----SAEIQNHGIEAAWAGGKNGREVMNRLIPLVPTILS 123

Query: 219 KDGLCSVE-IGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR--VLLFCR 264
           + GL  +  I  N   ++++I E R L          G +   +L FCR
Sbjct: 124 EKGLFYIVTIQENNPDEIIKILERRGLKGTKVLCRQAGRENLSILKFCR 172


>gi|321225997|gb|EFX51050.1| putative O-methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 268

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 62  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 121

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 122 TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 171

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 172 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 230

Query: 262 F 262
            
Sbjct: 231 A 231


>gi|254258065|ref|ZP_04949119.1| putative methyltransferase [Burkholderia pseudomallei 1710a]
 gi|254216754|gb|EET06138.1| putative methyltransferase [Burkholderia pseudomallei 1710a]
          Length = 378

 Score = 84.4 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|296108844|ref|YP_003615793.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME]
 gi|295433658|gb|ADG12829.1| protein of unknown function DUF890 [Methanocaldococcus infernus ME]
          Length = 262

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 16/179 (8%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +N+ +        P P +  L   ++   L RI+ +D  ++L++GTG+G + L L  
Sbjct: 46  KHLFNLDMDFHESALVPTPISRYLFLDSVTKELKRIKNKDKFKMLEIGTGSGIIAL-LAA 104

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS------DWFSSVEGLFDVIVSN 171
           +   +  V  ++    L++A+ N + N +SE    + S               FD+I+S 
Sbjct: 105 KIFNYNVVATEVIEDYLKLAEQNILKNSLSENIRLINSRGKIIRGIHELEGEKFDIILSY 164

Query: 172 PPYIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+ +   V       R F   ++     + GG  G      + +    +L + G+ S+
Sbjct: 165 PPFYDDNAVASG----RKFAGALAKEVELIGGGKFGEKFSLRLIEEGLDYLERKGIISI 219


>gi|238762789|ref|ZP_04623758.1| Methyltransferase small [Yersinia kristensenii ATCC 33638]
 gi|238699094|gb|EEP91842.1| Methyltransferase small [Yersinia kristensenii ATCC 33638]
          Length = 248

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +   +  ++LD+G G+G + L + + S       GV++  +A + A SN   +  ++R 
Sbjct: 42  WVPVENARKVLDIGCGSGLIALMIAQRSASEVIIDGVELEPEAAQQAISNVAQSPWADRV 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 102 RIYEQDVHQFAENHLHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLLF 262
            + +   + + ++G+  V + ++  V++ R+   +  F +      +D  G    R+LL 
Sbjct: 153 ALLNCAEKLITEEGIFCVVLPHDLGVELSRLAVQQNWF-IRCQVDIRDRPGKPLHRMLLM 211


>gi|195032127|ref|XP_001988442.1| GH10570 [Drosophila grimshawi]
 gi|193904442|gb|EDW03309.1| GH10570 [Drosophila grimshawi]
          Length = 220

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 79/187 (42%), Gaps = 9/187 (4%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGV 127
              +EP  ++ LL+D+  A      ++      +++G+G+G +  AL K        +  
Sbjct: 15  EHVYEPAEDSFLLLDALEADLEFLEKQLQPRLCVEIGSGSGVIITALAKRLSHAAHCLAT 74

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLE 186
           DI+ +A E  +  A  NG   + D+++ +  + +     D+++ NPPY+ +   + L  +
Sbjct: 75  DINPRACEATRRTASRNGA--KLDSVRCNLTNGLRRRCVDLLLFNPPYVVTSDEELLHQQ 132

Query: 187 VRDFDPRISLD----GGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFES 241
                   +L     GG  G      + + +   L+  G+   + +  N+  ++V+    
Sbjct: 133 GISSATERNLVYSWAGGRRGRRVTDILLEQLDDILSPGGVLYLLLLHENKPDEIVQQLAR 192

Query: 242 RKLFLVN 248
            K   V 
Sbjct: 193 LKFKAVK 199


>gi|311896978|dbj|BAJ29386.1| hypothetical protein KSE_35810 [Kitasatospora setae KM-6054]
          Length = 516

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 15/158 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L V  A         +R V  +LDLG+G+G   L   + +   +    D++ +AL
Sbjct: 155 RRDLVLGVGGASTTLANLTVRRPVREVLDLGSGSGVQALHAARHAQ--RVTATDLNPRAL 212

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
              +  A  +G  ER +T +   +  V +  FD+IVSNPP++ S                
Sbjct: 213 HFTRLTAALSGF-ERVETAEGSLYEPVGDRRFDLIVSNPPFVISPAGRFTYR-------- 263

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              DGG+ G    R++  G + HL   G C +   +  
Sbjct: 264 ---DGGMAGDELCRSVVRGAAAHLEPGGYCQLLANWQH 298


>gi|323452819|gb|EGB08692.1| N6-adenine specific methyltransferase-like protein, HemK
           [Aureococcus anophagefferens]
          Length = 368

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 78/201 (38%), Gaps = 30/201 (14%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKGVGVD 128
            +EP  +T LL+D AL      +       ++++G G+G V   +A L  +   + V VD
Sbjct: 30  VYEPAEDTFLLLD-ALFAERSSLRALGDATVVEVGPGSGVVSAYVAALLAAQAPRVVCVD 88

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------------EGLFDVIV 169
           ++ +A  ++   A  NG   R D ++ D  + V                    G  DV+V
Sbjct: 89  VNPRACALSARTAAANGA--RVDVVRGDLATRVRRRPSAARKASRGARRCLARGSVDVLV 146

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIG 228
            NPPY+ +        EV       S  GG  G      +   V+R L+  G    V + 
Sbjct: 147 FNPPYVPTPR-----AEVGGAGIEASWAGGDRGREVLDRLLPDVTRALSPRGRFYVVVVE 201

Query: 229 YNQKVDVVRIFESRKLFLVNA 249
            N   D+ RI  +  L     
Sbjct: 202 ENDPDDIARILAADGLERTTV 222


>gi|50729887|ref|XP_416689.1| PREDICTED: similar to N6-DNA methyltransferase A [Gallus gallus]
          Length = 218

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 74/198 (37%), Gaps = 10/198 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            D +EP  +T LL+D AL     ++ +  +   L++G+G+G V   L          +  
Sbjct: 21  RDVYEPAEDTFLLLD-ALERDAAQLRQAGIDICLEIGSGSGVVSAFLASIIGASALYLCT 79

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A       A  N V  +     L       + G+ D+++ NPPY+ +        
Sbjct: 80  DINPMAAYCTLETAQLNNVHLQPVITDLVKGLSPRLNGMVDLLLFNPPYVVTP-----SE 134

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV+      S  GG  G      +   V+  L+  GL  +  I  N   +++       L
Sbjct: 135 EVQSHGIEASWAGGKKGREVMDRVFPLVADLLSTGGLFYLVTIKENNPDEILETMTKHGL 194

Query: 245 FLVNAFKDYGGNDRVLLF 262
                     G + + + 
Sbjct: 195 EGTRLLSRQAGQEMLTIL 212


>gi|53720695|ref|YP_109681.1| hypothetical protein BPSL3086 [Burkholderia pseudomallei K96243]
 gi|52211109|emb|CAH37097.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
          Length = 396

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 177 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 222

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 223 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 279

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 280 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 328

Query: 222 LCSV 225
              +
Sbjct: 329 WLIL 332


>gi|300725122|ref|YP_003714450.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061]
 gi|297631667|emb|CBJ92380.1| N-methyl-transferase [Xenorhabdus nematophila ATCC 19061]
          Length = 234

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 20/168 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +  L    F   P T       +A +LP        R+L++G G+G + +        
Sbjct: 37  GRQWELIRGVF---PGTLTGATEVMASALPY---PVGGRMLEVGCGSGVISVTAALNG-V 89

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPP--YIES 177
            + V +DI+  A+     NA+ +GV  +     SD FS++E    FD+I  N P  Y++ 
Sbjct: 90  SEVVALDINPNAVTNTLRNAIRHGVETKVSARVSDVFSALEMTEDFDLIFWNVPWTYVDG 149

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  L    FDP  +   G       R +  G S +L K+G   +
Sbjct: 150 DFDMASELHAAVFDPEYA---GQ------RRLIQGASAYLRKNGRLLI 188


>gi|161612639|ref|YP_001586604.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362003|gb|ABX65771.1| hypothetical protein SPAB_00334 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 268

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 62  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 121

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 122 TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 171

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 172 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 230

Query: 262 F 262
            
Sbjct: 231 A 231


>gi|152978607|ref|YP_001344236.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           succinogenes 130Z]
 gi|226712985|sp|A6VMV4|RSMC_ACTSZ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150840330|gb|ABR74301.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus succinogenes
           130Z]
          Length = 333

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 7/157 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + N +L   +    P   +   +D      L  I       +LDLG G G +   + 
Sbjct: 153 WKTYRNPKLDALTVYSLPGVFSADELDGGTELLLSTINTHIRGDVLDLGCGAGVLGAYVK 212

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +++P  + +  DI   AL  A+     N ++ +   L SD FS ++G FD+I+SNPP+ +
Sbjct: 213 QQNPQARVMLTDIHAMALASAERTLAENRLAGKV--LASDVFSHIQGKFDLIISNPPFHD 270

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +      +     + R  L    DG      I    
Sbjct: 271 GIGTAYRAVSELIKEARWRL--KEDGEL---RIVANA 302


>gi|158520560|ref|YP_001528430.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
 gi|158509386|gb|ABW66353.1| methyltransferase small [Desulfococcus oleovorans Hxd3]
          Length = 241

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 19/168 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            I      RI+DLGTG G + L L    P     G++I  +  +IA  NA  N +++R  
Sbjct: 36  HITPAPGARIVDLGTGCGIIPLILACRHPSVSITGIEIQPQLAQIATENAAANQMTDRVS 95

Query: 152 TLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGIDGLS 204
            + +D  ++ +    G  D++V NPP+ +         E R     +  ++L        
Sbjct: 96  IVCADIRNANDHLPAGKADIVVCNPPFRKVAAGRINPDEERAIARHELAVTL-------- 147

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAF 250
             + I     R L   G   V     +  D++       +   LV   
Sbjct: 148 --KDILAAAKRALRTAGEFVVIYPAFRAPDMICAMREAGIEPKLVRTI 193


>gi|167038525|ref|YP_001666103.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167038733|ref|YP_001661718.1| methyltransferase small [Thermoanaerobacter sp. X514]
 gi|256751395|ref|ZP_05492274.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913682|ref|ZP_07130999.1| putative RNA methylase [Thermoanaerobacter sp. X561]
 gi|307723303|ref|YP_003903054.1| RNA methylase [Thermoanaerobacter sp. X513]
 gi|320116921|ref|YP_004187080.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1]
 gi|166852973|gb|ABY91382.1| methyltransferase small [Thermoanaerobacter sp. X514]
 gi|166857359|gb|ABY95767.1| methyltransferase small [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256749777|gb|EEU62802.1| methyltransferase small [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890367|gb|EFK85512.1| putative RNA methylase [Thermoanaerobacter sp. X561]
 gi|307580364|gb|ADN53763.1| RNA methylase [Thermoanaerobacter sp. X513]
 gi|319930012|gb|ADV80697.1| RNA methylase [Thermoanaerobacter brockii subsp. finnii Ako-1]
          Length = 248

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 19/164 (11%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             + R + +  +D+ L  +    +K D  +I+DLG GTG + + +  ++      GV+I 
Sbjct: 18  IIQHRDKFKFGMDAVLLANFVTAKKGD--KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQ 75

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIE---SVIVDCL 183
               ++A  + V N + ER   ++ D      + G   FD++ SNPPY+           
Sbjct: 76  EDMADMATRSVVINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMPVKTGFDKKQE 135

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +  ++    + GG              S+ L   G   +  
Sbjct: 136 SENIARYE----IYGG------LEDFIKAASKLLKFGGKFFMIH 169


>gi|332283796|ref|YP_004415707.1| hypothetical protein PT7_0543 [Pusillimonas sp. T7-7]
 gi|330427749|gb|AEC19083.1| hypothetical protein PT7_0543 [Pusillimonas sp. T7-7]
          Length = 389

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 82/217 (37%), Gaps = 39/217 (17%)

Query: 51  IHRILGWRDFYNV---------RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVR 100
           +  ++G  ++            ++ +    F P R E   LV  A               
Sbjct: 160 LQGLIGAHEWRKKGVAVAGLTDKIHVHYGVFSPNRGEYIALVAQA--------PLPATDL 211

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
             D+GTG+G +  A+L +    K +  D   +AL+ A+ N    G+++  +  Q+D F  
Sbjct: 212 AFDIGTGSGVLA-AVLAQRGLRKIIATDQDTRALDCARENINRLGLAKTIELQQTDLFP- 269

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +G   +I+ NPP++ +     +   + D D R+ L G + GL            HL  D
Sbjct: 270 -DGKSSLIICNPPWLPARPTTAIEHAIYDPDNRM-LLGYLQGL----------PAHLQAD 317

Query: 221 --GLCSV----EI-GYNQKVDVVRIFESRKLFLVNAF 250
             G   +    E  G      + +   +  L ++   
Sbjct: 318 GEGWLIMSDLAEHLGLRSPDFLSKAITNAGLRVIEQH 354


>gi|205353685|ref|YP_002227486.1| hypothetical protein SG2626 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857996|ref|YP_002244647.1| hypothetical protein SEN2569 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|262828602|sp|B5QTV6|TRMN6_SALEP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828609|sp|B5RD57|TRMN6_SALG2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|205273466|emb|CAR38443.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206709799|emb|CAR34151.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320085537|emb|CBY95316.1| Uncharacterized adenine-specific methylase PM0390 [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|326628789|gb|EGE35132.1| Methyltransferase small [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 245

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQSWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|167740392|ref|ZP_02413166.1| hypothetical protein Bpse14_20175 [Burkholderia pseudomallei 14]
          Length = 372

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 153 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 198

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 199 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 255

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 256 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 304

Query: 222 LCSV 225
              +
Sbjct: 305 WLIL 308


>gi|149909422|ref|ZP_01898077.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36]
 gi|149807532|gb|EDM67481.1| 16S RNA G1207 methylase RsmC [Moritella sp. PE36]
          Length = 344

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 23/143 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+     L  + K+   R+LDLG G G +   + K  P  K    D+S  A++ ++    
Sbjct: 190 DTGSKILLNNLHKKPSGRVLDLGCGAGIIGSYIAKRFPASKVEMTDVSALAVKSSQLTLA 249

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N ++ +     SD +S + G FD I+SNPP+   +       E                
Sbjct: 250 ANELAGQ--AYLSDVYSDISGKFDYIISNPPFHAGLKTHYASTE---------------- 291

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                T     + ++N  G   +
Sbjct: 292 -----TFLKEANGYINPRGHLVL 309


>gi|42519266|ref|NP_965196.1| methyltransferase [Lactobacillus johnsonii NCC 533]
 gi|81832209|sp|Q74IX0|PRMA_LACJO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|41583554|gb|AAS09162.1| probable methyltransferase [Lactobacillus johnsonii NCC 533]
          Length = 315

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDVGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N + +  D  +++    ++  +D+IV+N                      ++  
Sbjct: 217 KENIALNNI-DNIDVRKANLLKDIDEKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLN++G      I Y Q   + +  E     +
Sbjct: 253 ------DILLELIPDLDNHLNENGKIIFSGIDYLQLPKIEKALEENNFVI 296


>gi|324516415|gb|ADY46524.1| HemK methyltransferase family member 2 [Ascaris suum]
          Length = 208

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 15/163 (9%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVG 126
               +EP  +T LL+D AL      +  RDV  ++++G G+G V     +        + 
Sbjct: 14  RESVYEPAEDTFLLLD-ALEKDAEVLRDRDVSIVVEVGCGSGVVSAFCAQLLQRPACILA 72

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
            D++  AL+  K+ A+ N +    DT+Q D        + G+ D+++ NPPY+ +V    
Sbjct: 73  TDVNFMALKCTKNTAILNAID--LDTVQCDLIVALSDRLRGIVDLLLFNPPYVPTVTTGN 130

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +            GG  G      +   V + L+  GL  +
Sbjct: 131 DNIS-------RCWAGGASGREVIDRLLKEVPKLLSPTGLMYI 166


>gi|254190456|ref|ZP_04896964.1| putative methyltransferase [Burkholderia pseudomallei Pasteur
           52237]
 gi|157938132|gb|EDO93802.1| putative methyltransferase [Burkholderia pseudomallei Pasteur
           52237]
          Length = 396

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 177 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 222

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 223 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 279

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 280 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 328

Query: 222 LCSV 225
              +
Sbjct: 329 WLIL 332


>gi|295698693|ref|YP_003603348.1| hypothetical adenine-specific methylase [Candidatus Riesia
           pediculicola USDA]
 gi|291157085|gb|ADD79530.1| hypothetical adenine-specific methylase [Candidatus Riesia
           pediculicola USDA]
          Length = 119

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + SD F+S+    +D+I++NPPY++   +  L  E +  +P ISL  G DGL   + I  
Sbjct: 2   IHSDLFTSIPPKKYDLIITNPPYVDQKTLGMLPKEYQ-MEPVISLRAGEDGLKFIKKILR 60

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             S  LN++GL   E+G N    ++ +F           K
Sbjct: 61  YSSYFLNENGLLICEVGEN----IMNLFSRFPKVNFKILK 96


>gi|29125868|emb|CAD67788.1| methylase [Tetraodon nigroviridis]
          Length = 213

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 18/203 (8%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVD 128
           D +EP  +T LL+D AL      +++  V   L++G+G+G V   L     P    +  D
Sbjct: 20  DVYEPAEDTFLLMD-ALEKDAETLQRPAVC--LEVGSGSGVVSAFLASVIGPSALYLCTD 76

Query: 129 ISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLG 184
           ++  A +     +  N VS +    +L       + G  DV+V NPPY+   S  V   G
Sbjct: 77  LNPAAAQCTAKTSSCNRVSLQPVITSLVDGLLPRLSGKVDVLVFNPPYVVTPSDEVGSRG 136

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRK 243
           +E        +  GG  G          V++ L+ +G   +  I  N   D++     + 
Sbjct: 137 IEA-------AWAGGRRGREVTDRFLPVVAQLLSTEGSFYLITIAENDPEDIITALSLQG 189

Query: 244 LFLVNAFKDYGGNDR--VLLFCR 264
           L   +      GN+R  VL F R
Sbjct: 190 LQGESFLSRRAGNERLSVLRFQR 212


>gi|152964456|ref|YP_001360240.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
 gi|151358973|gb|ABS01976.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
          Length = 508

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 19/158 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V R+LD+GTG G   L   + +   +    D S +AL++A  NA  N V+   D  Q
Sbjct: 166 RTPVERVLDIGTGCGIQALHASRHAR--RVTATDTSERALDLAAVNAALNEVA--LDLRQ 221

Query: 155 SDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                 VE    F ++VSNPP++    +      V  ++ R   DGG+ G S  + +  G
Sbjct: 222 GSLLEPVEAGEEFGLVVSNPPFV----ITPRTAAVPTYEYR---DGGMPGDSLVQRLVGG 274

Query: 213 VSRHLNKDGLCSV----EIGYNQ--KVDVVRIFESRKL 244
           V   L   G+  +    E+   Q     V    E   L
Sbjct: 275 VGSVLAPGGVAQLLGNWELHEGQSWSQRVESWLEGTGL 312


>gi|316967049|gb|EFV51542.1| putative N(6)-adenine-specific DNA methyltransferase 1 [Trichinella
           spiralis]
          Length = 164

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 18/154 (11%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI 129
            + P  ++ LL++ A+     +I+    V  L++G G+G +  ++ K           DI
Sbjct: 20  VYPPSEDSYLLLE-AIQLDWEKIKTLKPVICLEIGCGSGVIACSVAKSLQSGAVIFATDI 78

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES----VIVD 181
           S  A+E+ K N   N + + F  + +D  S +        D+++ NPPYI         D
Sbjct: 79  SQIAVELTKVNVEQNNIDKIFCPIVADLISPLYDRLLNSVDLLLFNPPYIPRLSDFDDTD 138

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            L              GG +G    R I   + +
Sbjct: 139 ELSSTWCG--------GGPEGTDILRRIFFQLHK 164


>gi|317493748|ref|ZP_07952165.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918075|gb|EFV39417.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 346

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   ++ +      F  R      +D      L  +E     ++LD+G G G +  
Sbjct: 158 WWENYQTGSLTIATLPGVFS-RDG----LDIGSHLLLSSLEPHMKGKVLDVGCGAGVLSA 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+ K SP  K    D+S  ALE +++    N +    + + S+ +S V G FD+I+SNPP
Sbjct: 213 AMAKMSPKVKLTLTDVSAAALESSRATLAANDIQG--EVIASNVYSDVNGRFDMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+   T+  G ++ L   G  
Sbjct: 271 FH---------------------DGMQTSLTAAETLIRGAAKQLQIGGEL 299


>gi|76802473|ref|YP_327481.1| protein methyltransferase [Natronomonas pharaonis DSM 2160]
 gi|76558338|emb|CAI49928.1| protein methyltransferase [Natronomonas pharaonis DSM 2160]
          Length = 191

 Score = 84.0 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 23/196 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              +EP  ++ LL D+A       +E+ D    L++G G G V   +   +   + VG D
Sbjct: 10  PTVYEPAEDSRLLADTA-------VERVDGGVALEVGVGFGYVAAQVASAT-ETRVVGCD 61

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEV 187
           I+ +A   A+            +T++S+         FDV++ NPPY+ +   +    + 
Sbjct: 62  INPEACVRARE--------AGIETVRSNLTDPFAADSFDVVLFNPPYLPTPPEEEWD-DP 112

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKLFL 246
            +     +L GG DG    R   D + R L   G C + +        VV++        
Sbjct: 113 LEH----ALSGGEDGRRVIRPFLDDLGRVLRPAGRCLLLVSSLTDIDAVVKLAADAGFES 168

Query: 247 VNAFKDYGGNDRVLLF 262
               ++    +R+++ 
Sbjct: 169 REVAEESFPFERLVVL 184


>gi|255326733|ref|ZP_05367809.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
 gi|255295950|gb|EET75291.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
          Length = 583

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 60/168 (35%), Gaps = 18/168 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A        E+  V R LD+GTG G     LL  +        
Sbjct: 156 RPGVL--RKDHVLGIGHASLTLAQITERTPVKRALDVGTGCGIQTFHLLAHAE--HVTAT 211

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           DIS +AL   + N + N             R    +      V G LFD++VSNPP++ +
Sbjct: 212 DISERALAFTRFNLLLNAQALNIDPQNPQARVSLREGSLLEPVAGELFDLVVSNPPFVIT 271

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             V     E    +     DGG+ G     T+   +   L   G   +
Sbjct: 272 PRVAGESAE----EQFTYRDGGLPGDEIVSTMVRQLPSVLVPGGRAQM 315


>gi|160881502|ref|YP_001560470.1| methyltransferase small [Clostridium phytofermentans ISDg]
 gi|160430168|gb|ABX43731.1| methyltransferase small [Clostridium phytofermentans ISDg]
          Length = 207

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++      + F P        D      L  +   +   +LDLG G G V +   K    
Sbjct: 10  SLDFITDPEVFSPS-----FADRGTLAMLSYVTFDNSDTLLDLGCGYGLVGIYASKVLSP 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPY 174
            +    DIS KA+E++K NA  N V +    LQSD F ++    + +I+SNPPY
Sbjct: 65  ARVTMCDISEKAVELSKKNAEYNQVLDELTILQSDGFRNLPVDEYSLILSNPPY 118


>gi|307265689|ref|ZP_07547242.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919333|gb|EFN49554.1| putative RNA methylase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 248

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +    +K D  +I+DLG G+G + + +  ++      GV+I     ++A  + 
Sbjct: 29  MDAVLLANFVTAKKGD--KIVDLGCGSGIIPILIAAKTQDTFIYGVEIQEDMADMATRSV 86

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
           V N + ER   ++ D      + G   FD++ SNPPY+              +  ++   
Sbjct: 87  VINKMEERIKIIKGDVRGLEKILGYEKFDIVTSNPPYMLVKTGFDKKQKSENIARYE--- 143

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            + GG              S+ L   G   +  
Sbjct: 144 -IYGG------LEEFIKAASKLLKFGGKFFMIH 169


>gi|119026137|ref|YP_909982.1| hypothetical protein BAD_1119 [Bifidobacterium adolescentis ATCC
           15703]
 gi|118765721|dbj|BAF39900.1| hypothetical protein [Bifidobacterium adolescentis ATCC 15703]
          Length = 203

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E  +    LDLG G G + LAL   SP      +D++ +ALE+ + NA  NG+  
Sbjct: 52  LRQAPEPPEEGTFLDLGCGWGPIALALGFASPKADIWALDVNERALELTRRNAELNGMGN 111

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                        E  FD+I SNPP    V  + L   +  + PR  L+ G       + 
Sbjct: 112 IHAATADGI--PAETTFDLIWSNPPI--RVGKEVLHTLLMTWLPR--LNAGGAAYLVVQK 165

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +  S  L      + ++G     +V +   S+   ++   K
Sbjct: 166 --NLGSDSLIP--WLATQLGD--GYEVSKYASSKGFRVIEVMK 202


>gi|310765221|gb|ADP10171.1| Ribosomal RNA small subunit methyltransferase [Erwinia sp. Ejp617]
          Length = 384

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 224 DIGSQLLLSTLKPDMKGKVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLA 283

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 284 ANQLEG--DVFASNVYSDISGRFDMIISNPPFH---------------------DGVQTS 320

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 321 LDAAQTLIRGAVSHLNTGGEL 341


>gi|311744775|ref|ZP_07718571.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272]
 gi|311311892|gb|EFQ81813.1| 16S rRNA methyltransferase [Aeromicrobium marinum DSM 15272]
          Length = 199

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLK 117
           +      T+++ +     +    +D A    L  +  R    R+LDLG G G + LA  +
Sbjct: 22  EMVGETWTVTTGSGVFSGDG---LDHATGVLLDEVTVRPSTSRLLDLGCGWGPLALAAAR 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +   VD++ +A E+   NA  +G++ R  +         E  FD I SNPP    
Sbjct: 79  THPSAEVWAVDVNDRARELTALNAERHGLAVRVASPDGV---PPEVQFDAIWSNPPI--R 133

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHY-RTI-ADGVSRHLNKDGL 222
           V    L   +  + PR++ DG +  +    R + AD + R L   G 
Sbjct: 134 VGKQALHELLLRWLPRLTPDGEL--MMVVGRNLGADSLHRWLVDQGW 178


>gi|16799361|ref|NP_469629.1| hypothetical protein lin0284 [Listeria innocua Clip11262]
 gi|16412713|emb|CAC95517.1| lin0284 [Listeria innocua Clip11262]
          Length = 201

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 39/170 (22%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKVVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQK------------VDVVRIFESRKLFLVNAFK 251
             HL + G   + I   Q              +V  +   +  F+  + K
Sbjct: 151 YDHLRETGELWIVIQKKQGGPSAEKKMEEVFGNVETVARDKGYFIFRSVK 200


>gi|88800042|ref|ZP_01115612.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
 gi|88777168|gb|EAR08373.1| hypothetical protein MED297_16574 [Reinekea sp. MED297]
          Length = 367

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 29/167 (17%)

Query: 62  NVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           N+ L      F E RP+   LV  +    LP  +K     +LDLG G G + LA  K  P
Sbjct: 190 NLTLRHLPGCFAENRPDPGALVFLSYYEHLPAADK-----VLDLGCGNGILGLAYFKAHP 244

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESV 178
             + V +D + +AL+ A+ N   N +     T+ S+  +++  +  FD+I+ NPP+ +  
Sbjct: 245 DAQVVLIDENAQALKSAEQNWTLNDLPGNAITVHSNGLNALAADQQFDLILCNPPFHQDN 304

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +                          + + D   +HL+KDG   V
Sbjct: 305 TLTE---------------------GIAQKLFDDAKKHLSKDGEFWV 330


>gi|288799851|ref|ZP_06405310.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333099|gb|EFC71578.1| SAM-dependent methyltransferase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 239

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 16/139 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GTG+G + L + +  P  + V +DI   A + A SN   +   +R   + +
Sbjct: 34  KGGERILDIGTGSGLIALMMAQRCPLAQIVALDIDEGAYKQAVSNVEGSVFCDRISVVHA 93

Query: 156 DWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                       +EG FD IVSNPP+  + +               +     D LS    
Sbjct: 94  SLQDYCKVNKVGLEGSFDAIVSNPPFFVNSLKSKGD--------SRTTARHTDTLSFVE- 144

Query: 209 IADGVSRHLNKDGLCSVEI 227
           +   VS  L + G  S  I
Sbjct: 145 LLRWVSFLLREQGTFSCII 163


>gi|284041969|ref|YP_003392309.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283946190|gb|ADB48934.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 363

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 18/171 (10%)

Query: 60  FYNVRLTLSSD-TFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + N  L ++           ELLVD   +A   +     +    R L+LGTG+G + ++L
Sbjct: 108 YANRLLAVTPPLWLRGYEPGELLVDISATAFWMARFVANRGPARRALELGTGSG-LLVSL 166

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
           L      + V V+      E+A  N + NG+ ER +      F  V +  FD+IV+NPP 
Sbjct: 167 LDA---AEAVAVEGEPGTAEVATFNVLLNGLDERVEVRAGKLFEPVADEQFDLIVANPPC 223

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           + +     L        P    DGG DG +  R +  GV  HL   G   V
Sbjct: 224 LPAPHGVALPP------PS---DGGEDGDAVLRQVLAGVGEHLEFGGEALV 265


>gi|32034232|ref|ZP_00134443.1| COG4123: Predicted O-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 216

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 12/144 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R   +ILDLGTGTG V + L + +    +   +++   A   A  N   +  S+R    Q
Sbjct: 17  RHKRQILDLGTGTGLVAIMLAQRTDENTQISALELEPNAYRQAVENCRNSAFSDRLQVYQ 76

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D         FD+IVSNPPY    +        R ++  ++       L          
Sbjct: 77  GDVLDYHFHQKFDLIVSNPPYFSESLAS------RSYERDLARAATQSHLD----WLLQA 126

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVR 237
            + L + G  S  + +     +V 
Sbjct: 127 KKWLAEQGEISFILPFEAAEKLVE 150


>gi|283456414|ref|YP_003360978.1| 16S RNA methylase [Bifidobacterium dentium Bd1]
 gi|283103048|gb|ADB10154.1| 16S RNA methylase [Bifidobacterium dentium Bd1]
          Length = 207

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E       LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+       
Sbjct: 61  EPAQEGTFLDLGCGWGPIALTMALESPKADVWALDVNERALELTKRNAEINGIGTIHAVT 120

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +    +   FD+I SNPP    +  + L   +  + PR++  GG   L   + +    
Sbjct: 121 ADEIPHDL--TFDLIWSNPPI--RIGKEALHELLMAWLPRLN-TGGAAYLVVQKNL---G 172

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           S  L      + ++G     +V +   ++   ++   K
Sbjct: 173 SDSLIP--WLATQLGD--GYEVSKYASAKGFRVIEVMK 206


>gi|254828716|ref|ZP_05233403.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258601121|gb|EEW14446.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 201

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N  +      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKVVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL ++G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLRENGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|16765962|ref|NP_461577.1| transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|238912707|ref|ZP_04656544.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|81853695|sp|Q8ZMX8|TRMN6_SALTY RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831275|sp|C0PVY6|TRMN6_SALPC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|16421192|gb|AAL21536.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|261247840|emb|CBG25669.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994782|gb|ACY89667.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159193|emb|CBW18708.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913636|dbj|BAJ37610.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|322613359|gb|EFY10301.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620437|gb|EFY17302.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625095|gb|EFY21924.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629461|gb|EFY26237.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633848|gb|EFY30587.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635454|gb|EFY32165.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639870|gb|EFY36549.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644244|gb|EFY40788.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649936|gb|EFY46356.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654881|gb|EFY51198.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658191|gb|EFY54457.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322661737|gb|EFY57955.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669718|gb|EFY65864.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673275|gb|EFY69380.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322674936|gb|EFY71023.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682959|gb|EFY78977.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685620|gb|EFY81615.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323130980|gb|ADX18410.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323191952|gb|EFZ77190.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200415|gb|EFZ85496.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201314|gb|EFZ86381.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208385|gb|EFZ93325.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211539|gb|EFZ96377.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215971|gb|EGA00703.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221752|gb|EGA06160.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225640|gb|EGA09867.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229358|gb|EGA13482.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235327|gb|EGA19411.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237487|gb|EGA21550.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245242|gb|EGA29243.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246467|gb|EGA30448.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254002|gb|EGA37824.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323259052|gb|EGA42700.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261975|gb|EGA45540.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267758|gb|EGA51239.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269683|gb|EGA53135.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332989571|gb|AEF08554.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 245

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|296269771|ref|YP_003652403.1| methyltransferase small [Thermobispora bispora DSM 43833]
 gi|296092558|gb|ADG88510.1| methyltransferase small [Thermobispora bispora DSM 43833]
          Length = 203

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 27/201 (13%)

Query: 62  NVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++RL      F P    P T +L+++A               +LDLG G G++ L L   
Sbjct: 26  HLRLETDRGMFSPGRIDPGTRVLLETA-------PPPPPEGNLLDLGCGYGSIALTLAMR 78

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P      VD++ ++LE+   NA    +     T+ +D     +  F  I SNPP    +
Sbjct: 79  APGATVWAVDVNRRSLELCARNAQRACLY-NVRTMHADEMPG-DVRFTGIWSNPPI--RI 134

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               L   +  +  +++ DG    L   R + AD + R LN  G               R
Sbjct: 135 GKAALHALLTRWLDQLTPDGVAY-LVVQRHLGADSLHRWLNDQGW-----------ATTR 182

Query: 238 IFESRKLFLVNAFKDYGGNDR 258
           +       ++      GG DR
Sbjct: 183 LASRTGYRVLRVAAREGGGDR 203


>gi|39540506|ref|NP_080642.1| N6-DNA methyltransferase A isoform 1 [Mus musculus]
 gi|38374046|gb|AAR19227.1| N6-DNA methyltransferase A [Mus musculus]
 gi|74216834|dbj|BAE26543.1| unnamed protein product [Mus musculus]
 gi|109730883|gb|AAI16395.1| N-6 adenine-specific DNA methyltransferase 1 (putative) [Mus
           musculus]
 gi|109732882|gb|AAI16394.1| N-6 adenine-specific DNA methyltransferase 1 (putative) [Mus
           musculus]
 gi|148665916|gb|EDK98332.1| HemK methyltransferase family member 2, isoform CRA_c [Mus
           musculus]
          Length = 214

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 69/195 (35%), Gaps = 16/195 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            D +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  RDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCL 183
           DI+ +A       A  N V  +     L       ++G  D++V NPPY+      V   
Sbjct: 77  DINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYVVTPPEEVGSR 136

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESR 242
           G+E        +  GG +G              L+  GL  +  +  N   ++ +  ++R
Sbjct: 137 GIEA-------AWAGGRNGREVMDRFFPLAPELLSPRGLFYLVTVKENNPEEIFKTMKTR 189

Query: 243 KLFLVNAFKDYGGND 257
            L    A     G +
Sbjct: 190 GLQGTTALCRQAGQE 204


>gi|55377169|ref|YP_135019.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049]
 gi|55229894|gb|AAV45313.1| protporphyrinogen oxidase [Haloarcula marismortui ATCC 43049]
          Length = 208

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 23/178 (12%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              ++P  +++LL  +A      R+E  D   +LD+GTG+G V   L       + VGVD
Sbjct: 29  ESVYQPAEDSDLLARTA----RERVEAGDT--VLDVGTGSGYVAATLADA--GARAVGVD 80

Query: 129 ISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S     +A   A  NGV   R D ++     +    FD++  NPPY+ +         +
Sbjct: 81  VSP----LACREAAENGVPVVRGDLVEPFRADA----FDLVAFNPPYLPTPPEQEWDDWM 132

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-NQKVDVVRIFESRKL 244
                  +L GG DG        + V R L   G   + +        V        L
Sbjct: 133 -----EHALSGGDDGRRLVDPFLETVERVLAPGGEALMLVSSLTDPAAVRAYASEHGL 185


>gi|152973948|ref|YP_001373465.1| methyltransferase small [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152022700|gb|ABS20470.1| methyltransferase small [Bacillus cytotoxicus NVH 391-98]
          Length = 199

 Score = 83.6 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 66/194 (34%), Gaps = 35/194 (18%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE 118
             TL    F    +  +     VD      +   +  D+   ILD+G G G + L+L KE
Sbjct: 20  EFTLRGSQFVFLSDRGVFSKNEVDFGSRLLIEAFQMPDIDGDILDVGCGYGPIGLSLAKE 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +   VD++ +ALE+AK     N   E     QS+ +  V+G +  I+SNPP     
Sbjct: 80  FRGRRVHMVDVNERALELAKE-NAANNNVENIRIFQSNVYEKVDGQYAAILSNPPIRA-- 136

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I      HL   G   + I   Q     + 
Sbjct: 137 -----------------------GKHIVHEILGKAFDHLVPGGELWIVIQKKQGAPSALK 173

Query: 237 RIFESRKLFLVNAF 250
           ++ E+     V   
Sbjct: 174 KLEET--FAEVEIV 185


>gi|319891505|ref|YP_004148380.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161201|gb|ADV04744.1| Ribosomal RNA small subunit methyltransferase C [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323465323|gb|ADX77476.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 202

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 78/235 (33%), Gaps = 49/235 (20%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH     PD+  D+++   +T A  +                + + LT  +  F  R + 
Sbjct: 2   SHYYDAHPDAATDEKE---ITYAYQQ----------------HQLHLTTDAGVFS-RDQV 41

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +   D  +   L          I+D+G G G + L L K +P      +D++ +AL +A+
Sbjct: 42  DFGSDLLVHTFLNAHPPGQKKTIVDVGCGYGPIGLMLAKVAPHDHITMLDVNHRALGLAE 101

Query: 139 SNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            NA  N +S      +SD  S V       +V+NPP                        
Sbjct: 102 KNAQRNQLS-NVTIQESDGLSQVANETQHYVVTNPPIRA--------------------- 139

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVNAFK 251
               G      I     R L  +G   V I   Q      +  E      V + K
Sbjct: 140 ----GKQVVHQIFVDAHRVLEANGELYVVIQKKQGMPSAKKKMEVV-FGNVESIK 189


>gi|212715539|ref|ZP_03323667.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660906|gb|EEB21481.1| hypothetical protein BIFCAT_00437 [Bifidobacterium catenulatum DSM
           16992]
          Length = 247

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E  +    LDLG G G + L L   SP      +D++ +AL++ + NA  NGV  
Sbjct: 96  LRQAPEPPEEGTFLDLGCGWGPIALTLGFASPKADIWALDVNERALDLTRRNAELNGVRN 155

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                  +  S V   FD+I SNPP    V  D L   +  + PR  L+ G       + 
Sbjct: 156 VRAVTADEIPSDV--TFDLIWSNPPI--RVGKDVLHELLMTWLPR--LNAGGAAYLVVQK 209

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +  S  L      + ++G     +V +   S+   ++   K
Sbjct: 210 --NLGSDSLIP--WLATQLGN--GYEVSKYASSKGFRVIEVMK 246


>gi|268593258|ref|ZP_06127479.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131]
 gi|291311154|gb|EFE51607.1| SAM-dependent methyltransferase [Providencia rettgeri DSM 1131]
          Length = 244

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 14/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                 V  +LD+G+G+G + L L + +       V++   A   A+ N + +  ++R  
Sbjct: 39  WAPVGGVQSVLDIGSGSGLIALMLAQRNAMLCVDAVELDNDAAVQAQENFIESPWADRLH 98

Query: 152 TLQSDW--FSSVEG-LFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +  D   +S +    +D+IVSNPPY   +V       +   +   ++ D          
Sbjct: 99  VINQDIVSYSQLSSVQYDLIVSNPPYFEPAVACRDEKRDQARYTSTLTHD---------- 148

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            + +     L   GL  + + Y     + ++ E+   F  
Sbjct: 149 VLLESAKSCLTSHGLFCLVLPYEVGEKIQKMAENSGWFTA 188


>gi|268319353|ref|YP_003293009.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
           FI9785]
 gi|262397728|emb|CAX66742.1| methyltransferase , ribosomal protein L11 [Lactobacillus johnsonii
           FI9785]
          Length = 315

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDVGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N + +  D  +++    +   +D+IV+N                      ++  
Sbjct: 217 KENIALNNI-DNIDVRKANLLKDINEKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLN++G      I Y Q   + +  E     +
Sbjct: 253 ------DILLELIPDLDNHLNENGKIIFSGIDYLQLPKIEKALEENNFVI 296


>gi|329667224|gb|AEB93172.1| putative methyltransferase [Lactobacillus johnsonii DPC 6026]
          Length = 294

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 142 TTQLVLLAMERALVK-----PMSVLDVGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 195

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N + +  D  +++    ++  +D+IV+N                      ++  
Sbjct: 196 KENIALNNI-DNIDVRKANLLKDIDEKYDLIVAN---------------------ILA-- 231

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLN++G      I Y Q   + +  E     +
Sbjct: 232 ------DILLELIPDLDNHLNENGKIIFSGIDYLQLPKIEKALEENNFVI 275


>gi|293392981|ref|ZP_06637298.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291424515|gb|EFE97727.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 290

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 31/170 (18%)

Query: 57  WRD---FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W D    +++ +      F  R      +D   +  L  ++K    ++LD+G G G +  
Sbjct: 100 WWDSYPLHDLEVKTLPGVFS-RDG----LDVGSSLLLSTLDKHMKGKVLDVGCGAGVMAS 154

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            + + SP  K    D++  A+E +++    NG+    + + S+ +S + G FD+I+SNPP
Sbjct: 155 VMARMSPKVKLTLSDVNAAAIESSRATLAANGIDG--EVIVSNVYSDISGRFDMIISNPP 212

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+   T+  G  +HL   G  
Sbjct: 213 FH---------------------DGLATSLTAAETLIRGALKHLPIGGHL 241


>gi|291550588|emb|CBL26850.1| Predicted O-methyltransferase [Ruminococcus torques L2-14]
          Length = 247

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L  +   F    +   L D A        + +    +LD+GTG G + + L  ++  
Sbjct: 18  GLELIQNPSKFCFGVDAVFLSDFA--------KVKPGETVLDMGTGNGIIPVLLAGKTKG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I  +  E+A+ +   N + +R   +  D   + E      FDVI +NPPY+ +
Sbjct: 70  KHFTGLEIQAETAEMARRSVAHNHLEDRISIVTGDIKEAAERFKPAFFDVITTNPPYMLA 129

Query: 178 VIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   +   +   +   +LD           I     R L   G   +  
Sbjct: 130 DHGLRNPDDSKAIARHEVLCTLD----------DILRESMRLLQDKGRFYMIH 172


>gi|258653913|ref|YP_003203069.1| methyltransferase small [Nakamurella multipartita DSM 44233]
 gi|258557138|gb|ACV80080.1| methyltransferase small [Nakamurella multipartita DSM 44233]
          Length = 509

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 61/152 (40%), Gaps = 15/152 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L + SA       I +  V   LDLGTG G   L L   +     V  DIS +AL
Sbjct: 142 RPDHVLGLGSASITLARAIVRDPVTTALDLGTGCGIQALHLAGHAG--SIVATDISPRAL 199

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A + A  N   + +D      F  V G  FD+IVSNPP++                  
Sbjct: 200 ALAGATARLN--QQHWDLRAGSLFDPVAGEQFDLIVSNPPFVVGDGTTRFTY-------- 249

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              D G+ G    R I +G   HL   G   +
Sbjct: 250 --RDSGLPGDGVGRAIVEGARTHLRPGGTAQL 279


>gi|213024661|ref|ZP_03339108.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 83

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLE 186
           D    A+ +A  NA    +      LQS WFS++ G  FD+IVSNPPYI++        +
Sbjct: 3   DRMPDAVALAIRNAEHLAIR-NVRILQSCWFSALSGQQFDMIVSNPPYIDAQDPHLSEGD 61

Query: 187 VRDFDPRISLDGGIDGLSHYRTI 209
           VR F+PR +L    +G++    I
Sbjct: 62  VR-FEPRSALVADENGMADLTHI 83


>gi|170595492|ref|XP_001902404.1| methylase family protein [Brugia malayi]
 gi|158589947|gb|EDP28750.1| methylase, putative family protein [Brugia malayi]
          Length = 199

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 28/173 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--L 116
             Y++        +EP  +T LL+D AL      +E+ +   ++++G+G+G + +    L
Sbjct: 5   PLYHITDEQKDSVYEPAEDTFLLLD-ALEKDREALEQLEPNVVVEIGSGSGIISVFCQQL 63

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNP 172
              P    V  D++ KAL+  ++ A  N V+   + +Q D  S+++    GL DV++ NP
Sbjct: 64  LRVPVLTLVT-DMNFKALQCTRATAQLNNVA--VEAVQCDLLSALDHRLYGLVDVLLFNP 120

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PY                       GG  G      +   +S  L   G   V
Sbjct: 121 PYARC------------------WAGGPTGRDAVDRLFAHLSEILAPGGFFYV 155


>gi|220932865|ref|YP_002509773.1| methyltransferase small [Halothermothrix orenii H 168]
 gi|219994175|gb|ACL70778.1| methyltransferase small [Halothermothrix orenii H 168]
          Length = 246

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 81/189 (42%), Gaps = 25/189 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++   +D F+   ++ LL +          + +D   ++DLG+G+G + L L  +    
Sbjct: 12  LQIIQDTDYFKFGTDSVLLANFV--------KVKDGESVVDLGSGSGVIPLLLAFKQKPG 63

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           + +G++I  + ++++K +A  NG+ E  + ++ D     +       D++V NPPY+   
Sbjct: 64  RVIGLEILPELVQLSKKSARMNGLEEIIEFIEGDIKEIDDYIELESVDLVVCNPPYMPPD 123

Query: 179 ---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
              I       +   +  I+L          + +    SR L   G  ++     +  ++
Sbjct: 124 KGKITKNREKAIARHEILITL----------KDVIKQGSRVLRLGGRMAMVHRTWRLPEI 173

Query: 236 VRIFESRKL 244
           + +    KL
Sbjct: 174 ITLMRENKL 182


>gi|145352410|ref|XP_001420542.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580776|gb|ABO98835.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 226

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESP 120
           ++      + P  ++ LLVD+  A     + +      ++LGTG+G +  +   L +   
Sbjct: 13  KIATHESVYPPAEDSFLLVDALAALWDDELARSRPKLCIELGTGSGYIACSNALLARAHG 72

Query: 121 FFKGV---GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSV------EGLFDVIVS 170
                     DI+  A+   ++    +GVS     T   D            G  DV+V 
Sbjct: 73  CGDVTRTRASDINPDAVAACRATCEAHGVSGTECATALGDLLEPHADALADAGGCDVLVF 132

Query: 171 NPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEI 227
           NPPY+   S  V   G+E        S  GG  G      +   V   L   G    + +
Sbjct: 133 NPPYVVTPSEEVGGRGIEA-------SWAGGARGREVLDRLLPSVRSALAPRGMFLCILL 185

Query: 228 GYNQKVDVVRIFESRKL 244
             N+  +V+ I     L
Sbjct: 186 AQNEPEEVMEIMRRDGL 202


>gi|218297324|ref|ZP_03497949.1| methyltransferase small [Thermus aquaticus Y51MC23]
 gi|218242361|gb|EED08904.1| methyltransferase small [Thermus aquaticus Y51MC23]
          Length = 251

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 16/178 (8%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
              R+        LDL +G+G   L     +       V+I+  A ++   N + NG  +
Sbjct: 10  LFARLHAMPGEHCLDLCSGSGIQALHCSSFA--ASVDAVEINPLARQVLWCNVLLNGRHD 67

Query: 149 RFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           R        +  +     +D++V+NPP +     + L              GGIDG +  
Sbjct: 68  RIQVWGGSLYDELPENRQYDLVVANPPLVP--FPEELDYPFVGH-------GGIDGFAVT 118

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R I  G+  HL++ G   + IG     D   +    +L  +    D     RV +  R
Sbjct: 119 RKIIQGLPEHLSETGRAQI-IGLTLADDEGDLIIEGELAELARTHDL--VIRVTVLNR 173


>gi|269955150|ref|YP_003324939.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
 gi|269303831|gb|ACZ29381.1| methyltransferase small [Xylanimonas cellulosilytica DSM 15894]
          Length = 572

 Score = 83.6 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 17/162 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTL 153
           +    R+LDLGTG G   L           VG DIS +AL  A+ NA  N G ++ FD  
Sbjct: 215 RNQTGRVLDLGTGCGIQAL--HAHRHAAAVVGTDISARALAFARFNAGLNLGDADAFDLR 272

Query: 154 QSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVR----DFDPRISLDGGIDGLSHYRT 208
           +      V G  FD++VSNPP++ +      G  V     DF+ R   DGG  G    R 
Sbjct: 273 RGSMLEPVAGEQFDLVVSNPPFVITPHSGAAGRAVHDALGDFEYR---DGGRAGDDLVRD 329

Query: 209 IADGVSRHLNKDGLCSVEIGYNQK------VDVVRIFESRKL 244
           +  GV   L   G   +   +  +        V    ++  L
Sbjct: 330 LIQGVGAVLAPGGTAQLLGNWEHRRGIPWTERVGEWLDASGL 371


>gi|188532753|ref|YP_001906550.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia tasmaniensis
           Et1/99]
 gi|226712953|sp|B2VH94|RSMC_ERWT9 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|188027795|emb|CAO95652.1| Ribosomal RNA small subunit methyltransferase C [Erwinia
           tasmaniensis Et1/99]
          Length = 342

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 182 DIGSQLLLSTLKPHMKGKVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 242 ANQLEG--DVFASNVYSDISGRFDMIISNPPFH---------------------DGVQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 279 LDAAQTLIRGAVSHLNTGGEL 299


>gi|1246430|emb|CAA48793.1| orfB [Clostridium acetobutylicum]
          Length = 298

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 28/191 (14%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   L+                    +  +E+   
Sbjct: 116 WKKYYKPTKIGARIVVKPLWEEYTPKDYELMLNMDPGMAFGTGTHETTRMCIQALERYVN 175

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N V    + L  +
Sbjct: 176 EDAEVFDIGTGSGILAIAAAKLNAK-KVLGVDLDSVAVKAAKENIQYNNV-NNIEILHGN 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+G  D+IV+N   I + +++ L  ++  F   +  DG        +  A+ V  +
Sbjct: 234 LMEVVQGKADIIVAN---IIADVINILIPDINKF---LKTDGYFISSGIIKDRAEDVIEN 287

Query: 217 LNKDGLCSVEI 227
           L K+    +E+
Sbjct: 288 LKKNKFEIIEV 298


>gi|56412535|ref|YP_149610.1| hypothetical protein SPA0276 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361470|ref|YP_002141106.1| hypothetical protein SSPA0261 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81821605|sp|Q5PNB8|TRMN6_SALPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828623|sp|B5BAS2|TRMN6_SALPK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831261|sp|A9N0W9|TRMN6_SALPB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|56126792|gb|AAV76298.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092946|emb|CAR58376.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 245

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 99  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 149 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|254825704|ref|ZP_05230705.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254991748|ref|ZP_05273938.1| hypothetical protein LmonocytoFSL_00527 [Listeria monocytogenes FSL
           J2-064]
 gi|255520714|ref|ZP_05387951.1| hypothetical protein LmonocFSL_05726 [Listeria monocytogenes FSL
           J1-175]
 gi|293594948|gb|EFG02709.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|328467861|gb|EGF38901.1| hypothetical protein LM1816_08950 [Listeria monocytogenes 1816]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + SV    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDSVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|254853481|ref|ZP_05242829.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|254932471|ref|ZP_05265830.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300764623|ref|ZP_07074615.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|258606853|gb|EEW19461.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584027|gb|EFF96059.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300514730|gb|EFK41785.1| HemK family modification methylase [Listeria monocytogenes FSL
           N1-017]
 gi|328476090|gb|EGF46799.1| hypothetical protein LM220_01497 [Listeria monocytogenes 220]
 gi|332310662|gb|EGJ23757.1| Methyltransferase small domain superfamily [Listeria monocytogenes
           str. Scott A]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + SV    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDSVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|149059754|gb|EDM10637.1| HemK methyltransferase family member 2 (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 181

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 11/160 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVELCLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ KA       A  N V  +     L       ++G  D++V NPPY+ +        
Sbjct: 77  DINPKAAACTLETARCNRVHLQPVITDLVQGLLPRLKGKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           EV       +  GG +G           S+ L+  GL  +
Sbjct: 132 EVGSHGIEAAWAGGRNGREVMDRFFPLASQLLSPRGLFYL 171


>gi|46906485|ref|YP_012874.1| hypothetical protein LMOf2365_0264 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|46879749|gb|AAT03051.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
          Length = 204

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 60  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 118

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + SV    +  I+SNPP                            G      I +G 
Sbjct: 119 SSVYDSVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 153

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 154 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 193


>gi|217076184|ref|YP_002333900.1| ribosomal RNA small subunit methyltransferase C [Thermosipho
           africanus TCF52B]
 gi|217036037|gb|ACJ74559.1| ribosomal RNA small subunit methyltransferase C [Thermosipho
           africanus TCF52B]
          Length = 198

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 68/201 (33%), Gaps = 43/201 (21%)

Query: 64  RLTLSSDTFEPRPE---TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R    S  +        T++L+++          + +   +LD+G G G + + L KE+P
Sbjct: 30  RFKSPSGVYSFGKIDRATKILIEN---------SRINFGDVLDIGCGYGVIGITLKKENP 80

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                  DI+ +A+E AK N+  N +    D  Q   +     + FD I+SNPP +    
Sbjct: 81  DINLYMSDINQRAVEFAKINSKDNNIEA--DIRQGYLYEPWNNMSFDHIISNPPIVA--- 135

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRI 238
                                 G   +  + +G    L + G    V         +   
Sbjct: 136 ----------------------GKQVWMNLIEGAFEKLREGGTLELVAYHNKGGKRIKEY 173

Query: 239 FESRKLFLVNAFKDYGGNDRV 259
             S     V      GG  RV
Sbjct: 174 MRSI-FGNVEELCKEGGI-RV 192


>gi|159904730|ref|YP_001548392.1| methyltransferase small [Methanococcus maripaludis C6]
 gi|159886223|gb|ABX01160.1| methyltransferase small [Methanococcus maripaludis C6]
          Length = 200

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 72/216 (33%), Gaps = 46/216 (21%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +  IL  + +        S  F P+     T +LV+         +E      +LD+G G
Sbjct: 17  VSGILRGKKY---SFNTDSGVFSPKKIDKGTIILVEE--------LEFLKSDDVLDVGCG 65

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLF 165
            G + +++  E         D++ +++ + + N   NG SE   +  Q D +  V+   +
Sbjct: 66  YGVIGISIADEVN--SVTMTDVNNRSVSLTRKNVKLNGKSEKNIEVFQGDLYEKVKNKKY 123

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            VI+SNPP                            G      I       LN++G   V
Sbjct: 124 SVIISNPPI-------------------------KAGKDLIHKIISKGYELLNENGSIWV 158

Query: 226 EIGYNQKV-DVVRIFESRKLFLVNAFKDYGGNDRVL 260
            I        + +  E      V       G  RVL
Sbjct: 159 VIQTKHGAKSLTKYMEEI-YGNVETVT-ISGGYRVL 192


>gi|290892603|ref|ZP_06555596.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290557912|gb|EFD91433.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +    D++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMADVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|313625354|gb|EFR95147.1| methyltransferase [Listeria innocua FSL J1-023]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 39/170 (22%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +  
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKVVHAILEDA 150

Query: 214 SRHLNKDGLCSVEIGYNQK------------VDVVRIFESRKLFLVNAFK 251
             HL + G   + I   Q              +V  +   +  F+  + K
Sbjct: 151 YNHLKETGELWIVIQKKQGGPSAEKKMEEVFGNVETVARDKGYFIFRSVK 200


>gi|138893706|ref|YP_001124159.1| methyltransferase [Geobacillus thermodenitrificans NG80-2]
 gi|196250749|ref|ZP_03149436.1| methyltransferase small [Geobacillus sp. G11MC16]
 gi|134265219|gb|ABO65414.1| Methyltransferase [Geobacillus thermodenitrificans NG80-2]
 gi|196209699|gb|EDY04471.1| methyltransferase small [Geobacillus sp. G11MC16]
          Length = 249

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 26/204 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+  S   F    +  LL   A              +I+DL TG G + L LL +    
Sbjct: 18  LRIIQSPSVFSFSLDAVLLAHFAYLPI-------QKGQIVDLCTGNGVIPL-LLSQRTKG 69

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESV 178
             +G++I  +  ++A+ +   NG+ E+ + +  D   + +      +DV+  NPPY  + 
Sbjct: 70  TIIGIEIQERLCDMARRSIQYNGLEEQIEIIHGDIKEAPQQIGYSRYDVVTCNPPYFPTA 129

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYNQKVDV 235
             D L          +++         Y T+ D V    + L + G  +      + +D+
Sbjct: 130 GQDELSKNE-----HLAIARHE----IYCTLEDAVRVSSQLLKQGGKAAFVHRPGRLLDI 180

Query: 236 VRIFESRKLFLVNAFKDY--GGND 257
           V +    +L        Y   G +
Sbjct: 181 VMLMRQYRLEPKRLRFVYPKAGKE 204


>gi|19115287|ref|NP_594375.1| prorein methyltransferase Mtq2 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74625923|sp|Q9UT94|MTQ2_SCHPO RecName: Full=eRF1 methyltransferase catalytic subunit mtq2;
           Short=eRF1 MTase catalytic subunit mtq2; AltName:
           Full=N(5)-glutamine methyltransferase catalytic subunit
           mtq2
 gi|5777699|emb|CAB53408.1| prorein methyltransferase Mtq2 (predicted) [Schizosaccharomyces
           pombe]
          Length = 231

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 18/209 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLAL----L 116
           +RL    D +EP  +T  L+D+    +    +  ++  +L  ++G G+G     L    L
Sbjct: 10  LRLKEFQDVYEPAEDTFALLDALEKDAKKLRQMAEMKNLLTAEIGCGSGCASSFLKSGIL 69

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FDTLQSDWFSSVE--GLFDVIV 169
           K  P       DIS  A   +K  A+ N    +     F T+Q+ +   +      D+++
Sbjct: 70  KNKPIVHF-MSDISNSACRASKITALNNRELYKDDNGLFITVQTSFLDGIRLGNGVDILI 128

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IG 228
            NPPY+ +   + +  E        +  GG DG+    T+ + +   L++DG+  +  + 
Sbjct: 129 FNPPYVPT-EFEEIPSEAATI--ASAWAGGTDGMDVTSTLLNQLKDILSQDGVFYMVAVA 185

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGND 257
            N+   +  I +     +    K   G +
Sbjct: 186 RNKLHSICEILQKDGFIVNETLKRKAGRE 214


>gi|33151458|ref|NP_872811.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus ducreyi
           35000HP]
 gi|81423896|sp|Q7VP87|RSMC_HAEDU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|33147678|gb|AAP95200.1| putative ribosomal RNA small subunit methyltransferase C
           [Haemophilus ducreyi 35000HP]
          Length = 329

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 28/169 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--RILDLGTGTGAVCLA 114
           W+ +    LT+ S    P   +   +D+     L     +D +   +LDLG G G +   
Sbjct: 150 WKSYRLADLTVLS---LPAAFSSTELDAGSQLLLSSFTNQDRLTGNVLDLGCGAGVIGAY 206

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L +  P       DI   A+  A++    N ++     + SD FS +   FD+IVSNPP+
Sbjct: 207 LKQRFPAISLTMSDIHSMAIHSAQATLAKNKLTG--TVIASDVFSHINDRFDLIVSNPPF 264

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + +      +E                     ++      HLN  G  
Sbjct: 265 HDDIDTAYHTVE---------------------SLIMQAKNHLNYGGEL 292


>gi|256833716|ref|YP_003162443.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM
           20603]
 gi|256687247|gb|ACV10140.1| rRNA (guanine-N(2)-)-methyltransferase [Jonesia denitrificans DSM
           20603]
          Length = 394

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 22/140 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+     +      RI+D+G G G + + + +  P       D+S +A+  A++    N 
Sbjct: 231 LSTLPTALTDLQSARIVDVGCGNGLLGVWIARHHPHVSVTMTDVSAQAVRSARATVDLNN 290

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V +R      D  S + +   D++V NPP+ +   V                        
Sbjct: 291 VGDRVSVRWMDALSQLPDHSADLVVCNPPFHDGTAVTTTPA------------------- 331

Query: 205 HYRTIADGVSRHLNKDGLCS 224
               I   V R L   G   
Sbjct: 332 --HRIFADVGRVLTPGGRML 349


>gi|241953067|ref|XP_002419255.1| N5-glutamine methyltransferase, putative [Candida dubliniensis
           CD36]
 gi|223642595|emb|CAX42845.1| N5-glutamine methyltransferase, putative [Candida dubliniensis
           CD36]
          Length = 224

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 79/194 (40%), Gaps = 15/194 (7%)

Query: 69  SDTFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGV 125
            + +EP  ++ LL+D        L    K  +  + ++GTG+G V   + K        +
Sbjct: 16  EEVYEPSEDSFLLLDCFEKEKDYLQSKFKTGIPLVTEIGTGSGIVTAFVAKHIVQNGIFL 75

Query: 126 GVDISCKALEIAKSNAVTNGVSER----FDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
             DI+  A +        N           + Q D  ++++    D+++ NPPY+ S  +
Sbjct: 76  TTDINPHACKTVLQTVKYNNDDGSSICLLGSTQMDLTAAIKEQEIDLLIFNPPYVPSSEI 135

Query: 181 DCLGLEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVV 236
             +       DP    ++L GG DG+     + + ++  L+K G+  +     N+  +V 
Sbjct: 136 PDIPKT--KNDPVWLDLALVGGEDGMVITWKVLNNLNNILSKSGVAYILFCARNKPENVA 193

Query: 237 RIFESRKLFLVNAF 250
            + +S+    V   
Sbjct: 194 SVMQSKGW-NVEVV 206


>gi|312173676|emb|CBX81930.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           ATCC BAA-2158]
          Length = 366

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 206 DIGSQLLLSTLKPHMKGKVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLA 265

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 266 ANQLEG--DVFASNVWSDISGRFDMIMSNPPFH---------------------DGVQTS 302

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 303 LDAAQTLIRGAVSHLNTGGEL 323


>gi|195117672|ref|XP_002003371.1| GI22924 [Drosophila mojavensis]
 gi|193913946|gb|EDW12813.1| GI22924 [Drosophila mojavensis]
          Length = 220

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 13/190 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGV 127
              +EP  ++ L +  AL   L  ++       L++G+G+G +  AL K        +  
Sbjct: 15  EHVYEPAEDSFL-LLDALEADLEFLDTLQPRLCLEIGSGSGVIITALAKRLANTTHCLAT 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLE 186
           DI+ KA E  K  A+ NG   R D+L+ +   ++     D+++ NPPY+ +   + L  +
Sbjct: 74  DINPKACEATKRTAIRNGA--RLDSLRCNLTDALRRRCIDLLLFNPPYVVTSD-EELQTQ 130

Query: 187 VRDFDPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIF 239
                P        S  GG DG      + + +   L+  G+   + +  N+  +++   
Sbjct: 131 QLTEKPATERNLVFSWAGGTDGRRVTDILLEQLDDILSPSGVLYLLLLHENKPDEIIEQL 190

Query: 240 ESRKLFLVNA 249
           + ++   V  
Sbjct: 191 KRQRFEAVKY 200


>gi|292489500|ref|YP_003532388.1| ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           CFBP1430]
 gi|291554935|emb|CBA22900.1| Ribosomal RNA small subunit methyltransferase [Erwinia amylovora
           CFBP1430]
          Length = 366

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 206 DIGSQLLLSTLKPHMKGKVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLA 265

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 266 ANQLEG--DVFASNVWSDISGRFDMIMSNPPFH---------------------DGVQTS 302

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 303 LDAAQTLIRGAVSHLNTGGEL 323


>gi|54025744|ref|YP_119986.1| hypothetical protein nfa37740 [Nocardia farcinica IFM 10152]
 gi|54017252|dbj|BAD58622.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 523

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 21/184 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +  L V  A    L     R V  +LDLGTG G   +     +      G D++ +AL 
Sbjct: 157 EDHVLGVGHASLSLLRATPTRRVGSVLDLGTGCGVQAVHAASYAD--HVTGTDVNPRALW 214

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A++ A  N +    + +   WF  V G  FD +V+NPP++  V    +    RD    +
Sbjct: 215 LAEATAALNELD--IELVAGSWFEPVVGRRFDQVVANPPFV--VGPARVEHTYRDSG--L 268

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKLFLVN 248
           +LDG          +       LN  G  ++        G + +  V     +  +    
Sbjct: 269 ALDGAS------ELVVGQAPGLLNPGGTAAMLAAWVHVDGEDWRARVSSWLPAEGVDAWV 322

Query: 249 AFKD 252
             +D
Sbjct: 323 VQRD 326


>gi|226306292|ref|YP_002766252.1| hypothetical protein RER_28050 [Rhodococcus erythropolis PR4]
 gi|226185409|dbj|BAH33513.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 499

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 68/184 (36%), Gaps = 23/184 (12%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +  L V  A    L       V  +LDLGTG G    AL   +        DI+ +A+++
Sbjct: 139 DHVLGVGHASLSLLQATPTAKVGSVLDLGTGCGIQ--ALHANTYADSVTATDINQRAVDL 196

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             +    NG+    + LQ  WF  VEG  FD +V+NPP++          E R       
Sbjct: 197 TAATMALNGLD--VELLQGSWFEPVEGRTFDQVVANPPFV--------VGEARVH--HTY 244

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRIFESRKLFLVN 248
            D G+D       +      +LN  G          +E G + +  +     +  +    
Sbjct: 245 RDSGLDLDGASELMISRSIDYLNPGGMAALLASWVHIE-GQDWRSRIASWLPAHGVDAWV 303

Query: 249 AFKD 252
             +D
Sbjct: 304 VQRD 307


>gi|311069146|ref|YP_003974069.1| ribosomal protein L11 methyltransferase [Bacillus atrophaeus 1942]
 gi|310869663|gb|ADP33138.1| ribosomal protein L11 methyltransferase [Bacillus atrophaeus 1942]
          Length = 311

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R++D+GTG+G + +              D+   A+E A+ N   N VS   +  
Sbjct: 172 FVKKGDRVIDVGTGSGILSIGAAMLGAES-VHAYDLDPVAVESARLNLKLNKVSGTAEVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    + G  DVIV+N                      ++                  
Sbjct: 231 QNNLLDGITGEHDVIVAN---------------------ILA--------EVILRFTSEA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              L   G       IG  +K +V    E     +V   
Sbjct: 262 YDLLKNGGHFITSGIIG-QKKQEVKDALEKAGFTIVEIL 299


>gi|81427947|ref|YP_394946.1| putative nucleotide methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78609588|emb|CAI54634.1| Putative nucleotide methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 69/196 (35%), Gaps = 36/196 (18%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +N + T  +  F        +  L+D+        + +     ILD+G G G + + L K
Sbjct: 26  FNFKFTTDNGVFSKNTVDYGSRALLDAV------DLSETPAGPILDMGCGYGPIGMTLAK 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +P  +   VD++ +AL +A+ N   N +       +S  + +V   +  I++NPP    
Sbjct: 80  LAPERQIDMVDVNERALGLAQKNCDLNQIQ-NVAIFESAEYQNVTAQYAAILTNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                                   G +  + I  G   HL  DG   V I   Q     +
Sbjct: 138 ------------------------GKTVVQNILKGAYDHLLPDGELDVVIQKKQGAPSAK 173

Query: 238 IFESRKLFLVN-AFKD 252
              +     V    KD
Sbjct: 174 QLMADTFGNVQIIHKD 189


>gi|167904471|ref|ZP_02491676.1| hypothetical protein BpseN_19618 [Burkholderia pseudomallei NCTC
           13177]
          Length = 377

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 32/184 (17%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  +         R+      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAAL-------GERIHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 203

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 204 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 260

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +     L   V D D R+            +    G++ HL     G
Sbjct: 261 RAPLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEG 309

Query: 222 LCSV 225
              +
Sbjct: 310 WLIL 313


>gi|257464573|ref|ZP_05628944.1| hypothetical protein AM202_04940 [Actinobacillus minor 202]
 gi|257450233|gb|EEV24276.1| hypothetical protein AM202_04940 [Actinobacillus minor 202]
          Length = 233

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 26/150 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V RILD+GTG+G V L L + +    +   +++   A + A  N   +  S R + +  
Sbjct: 38  NVQRILDMGTGSGLVALMLAQRTEERCQITALELEENAYQQAVENVKNSAWSARINVVHG 97

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI----- 209
           D  ++V    FD+IVSNPPY    +                           RT+     
Sbjct: 98  DVMNAVFSEKFDLIVSNPPYFSQSLATRNPQ-----------------RDLARTVVQSHL 140

Query: 210 --ADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +     LN+ G  +  +  +    +++
Sbjct: 141 DWLNQAKEWLNETGKITFILPVDAGEKLIQ 170


>gi|314932765|ref|ZP_07840134.1| methyltransferase domain protein [Staphylococcus caprae C87]
 gi|313654446|gb|EFS18199.1| methyltransferase domain protein [Staphylococcus caprae C87]
          Length = 186

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 63/179 (35%), Gaps = 33/179 (18%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           ++  T  +  F   R +     D  +   L          I D+G G G + L + K SP
Sbjct: 28  HLEFTTDTGVFSKDRVDYGS--DLLIKTFLKEHPPGPSKYIADVGCGYGPIGLTIAKVSP 85

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
             +   +D++ +AL + + N   N + E  + ++SD  S V +  FD I++NPP      
Sbjct: 86  HHQLYMLDVNNRALVLTEMNKTKNQI-ENAEIIESDCLSGVSDQQFDYILTNPPIRA--- 141

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                                 G      I +     L   G   V I   QK  V  +
Sbjct: 142 ----------------------GKDVVHRIFEEAYGKLKDQGALYVVI---QKNKVCHL 175


>gi|283477104|emb|CAY73004.1| Ribosomal RNA small subunit methyltransferase [Erwinia pyrifoliae
           DSM 12163]
          Length = 447

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 287 DIGSQLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLT 346

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 347 ANQLEG--DVFASNVYSDISGRFDMIISNPPFH---------------------DGVQTS 383

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 384 LDAAQTLIRGAVSHLNTGGEL 404


>gi|16802302|ref|NP_463787.1| hypothetical protein lmo0256 [Listeria monocytogenes EGD-e]
 gi|224502450|ref|ZP_03670757.1| hypothetical protein LmonFR_08004 [Listeria monocytogenes FSL
           R2-561]
 gi|255028588|ref|ZP_05300539.1| hypothetical protein LmonL_04186 [Listeria monocytogenes LO28]
 gi|16409621|emb|CAD00783.1| lmo0256 [Listeria monocytogenes EGD-e]
          Length = 201

 Score = 83.2 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|269124561|ref|YP_003297931.1| methyltransferase small [Thermomonospora curvata DSM 43183]
 gi|268309519|gb|ACY95893.1| methyltransferase small [Thermomonospora curvata DSM 43183]
          Length = 484

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 24/210 (11%)

Query: 26  PDSVLDDRQRFFLTNAIVR-------SLKHESIHRILGWRDFYNV-RLTLSSDTF-EPRP 76
           P+S   + +         R        L  E +    G    + V  L +        RP
Sbjct: 69  PESAFPEAEALVAAGLAERSGGELRALLHIEPLEGTDGSHLGHVVSDLKVRPGEGRALRP 128

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +  +    A A     +  R V   LDLGTG G   L L   +   +    D++ +AL +
Sbjct: 129 DHVVGAGGASASLAQLVIHRPVDNALDLGTGCGVQALHLRDRA--ARITATDLNPRALAL 186

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A+ +   +G+ +  + L+   +  V+   FD+IVSNPP++ S     +  E         
Sbjct: 187 ARLSFALSGLKD-VELLEGSLYEPVKDRRFDLIVSNPPFVISPGGGLVYRE--------- 236

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              G+ G    R +  G +  L   G C +
Sbjct: 237 --SGLPGDEVCRRLVGGAAERLTAGGWCQM 264


>gi|254831922|ref|ZP_05236577.1| hypothetical protein Lmon1_11235 [Listeria monocytogenes 10403S]
          Length = 201

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YNHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|190151361|ref|YP_001969886.1| ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|226712983|sp|B3GZF1|RSMC_ACTP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|189916492|gb|ACE62744.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 329

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +   ++ +      F     +  L D      L    K D ++  +LDLG G G + 
Sbjct: 150 WKSYRLQDLNIFALPAVFS----SAEL-DDGTQLLLSTFNKADRLKGKVLDLGCGAGVIG 204

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            +L ++    K    DI   ALE ++     N +      + SD FS++E  FD+IVSNP
Sbjct: 205 ASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFSNIEERFDLIVSNP 262

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + +                              +     + LN+ G  
Sbjct: 263 PFHDGIDTA---------------------YRAVEDLIAQAKQRLNRGGEL 292


>gi|149174999|ref|ZP_01853623.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797]
 gi|148846336|gb|EDL60675.1| hypothetical protein PM8797T_11504 [Planctomyces maris DSM 8797]
          Length = 191

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
              + + F PR      +D      L  +      R+LDLG G G V +   K       
Sbjct: 14  FETTPELFSPRG-----LDRGTEAMLSTVTFAPGERVLDLGCGCGVVGILAAKIVGAENV 68

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           V  D+   A+ I+K NA  N  +     LQSD F   +   F+ I+SNPPY E 
Sbjct: 69  VMTDVDADAVRISKKNAERNAAAG-VTVLQSDGFRDHQETDFEWILSNPPYHED 121


>gi|261250314|ref|ZP_05942890.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891]
 gi|260939430|gb|EEX95416.1| predicted O-methyltransferase [Vibrio orientalis CIP 102891]
          Length = 215

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 10/162 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
              +      +LD+GTGTG + L   + +       ++I   AL+ A+SN   +  S+R 
Sbjct: 12  SWAKLEASKNLLDIGTGTGLLSLMCAQRNASLTIDAIEIDSNALQAAQSNFAQSPWSDRI 71

Query: 151 DTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                D  +    G FD I+ NPPY  S                 +     + LSH   +
Sbjct: 72  QLHSGDVLTRPFHGKFDTIICNPPYFNSGEQTQNI--------SRATARHTNSLSH-EDL 122

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                  L   G  S  +   +    + + + +   L    +
Sbjct: 123 LQCCWDLLTDQGYASFVLPKVEGDAFIDLAKQQGWSLQRLCQ 164


>gi|229823576|ref|ZP_04449645.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271]
 gi|229787020|gb|EEP23134.1| hypothetical protein GCWU000282_00874 [Catonella morbi ATCC 51271]
          Length = 250

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 27/213 (12%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           +T+A       E +  +       N+ +  + D F         VD+ L     ++ +R 
Sbjct: 1   MTDATDLLKPGERLDYLARE----NLSIIQNPDYFAFS------VDAILLAHFAKVPRRQ 50

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RILDL +GTG +   L  ++       +++    +++A+ +   N +++R    Q D 
Sbjct: 51  TARILDLCSGTGVIPFLLSAKTAG-HIDAIELQEALVDMAQRSCQLNNLTDRLTFRQGDV 109

Query: 158 --FSSVEGLFDVIVSNPPYI----ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
               +   L+DV+  NPPY     +          +   +  ++L               
Sbjct: 110 KTMEAARPLYDVVTCNPPYFSVTNKQTQHHLTSHAIARHEVYLTL----------EQWVA 159

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              R L   G        ++  D++        
Sbjct: 160 QAKRQLRTRGKLFCVYRPDRLDDLMETLLGAGF 192


>gi|227890128|ref|ZP_04007933.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849303|gb|EEJ59389.1| ribosomal protein L11 methyltransferase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 315

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDVGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N + +  D  +++    +   +D+IV+N                      ++  
Sbjct: 217 KENIALNNI-DNIDVRKANLLKDINEKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLN++G      I Y Q   + +  E     +
Sbjct: 253 ------DILLELIPDLDNHLNENGKIIFSGIDYLQLPKIEKALEENNFVI 296


>gi|330997886|ref|ZP_08321720.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT
           11841]
 gi|329569490|gb|EGG51260.1| methyltransferase domain protein [Paraprevotella xylaniphila YIT
           11841]
          Length = 236

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D   ILD+GTG+G + + L ++      +G+DI  +A+  A  N      S+R     
Sbjct: 36  CPDSKYILDIGTGSGLIAIMLAQKC-NAYIIGIDIDEEAVNQATDNGKKTPWSQRLHFEV 94

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +  + +    FD+I  NPP+  + +      E R++          D L     +    
Sbjct: 95  ENALTYIPQKKFDLITCNPPFFTNSL--QCPGEKRNYARHS------DALPF-DALIANA 145

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              LN     +V +  +     +++   R L
Sbjct: 146 YTWLNDGACFNVVLPASSADAFIQMAWERGL 176


>gi|302879747|ref|YP_003848311.1| methyltransferase small [Gallionella capsiferriformans ES-2]
 gi|302582536|gb|ADL56547.1| methyltransferase small [Gallionella capsiferriformans ES-2]
          Length = 376

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 24/190 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  +        P     V+      LP + K   V   D+GTGTG +   L K     
Sbjct: 164 LQARIHPHYGVFSPVRGEYVELVANTPLPDLTKTQSVAF-DIGTGTGVLAAVLAKRG-IR 221

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                D   +AL  A+ N      +   D +Q+D F   EG   +IV NPP++ +     
Sbjct: 222 HITATDQDERALACARDNLTRLKCT--IDVVQADLFP--EGRAALIVCNPPWLPARPSSP 277

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK--DGLCSV----EI-GYNQKVDV 235
           L   V D + R+            +    G++ HL    +G   +    E  G   + ++
Sbjct: 278 LEYAVYDPESRM-----------LKGFLGGLAAHLEDEGEGWLILSDLAEHLGLRTRDEL 326

Query: 236 VRIFESRKLF 245
           + + ++  L 
Sbjct: 327 LALIDASGLQ 336


>gi|242022790|ref|XP_002431821.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus
           corporis]
 gi|212517153|gb|EEB19083.1| N5-glutamine methyltransferase MTQ2, putative [Pediculus humanus
           corporis]
          Length = 205

 Score = 83.2 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 22/199 (11%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           ++ I   +++++         +EP  +T LL+D AL   L  I  +    IL++G+G+G 
Sbjct: 2   LNHI--KKEYWDY-------VYEPAEDTFLLLD-ALEKDLDYIISKKPATILEIGSGSGT 51

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIV 169
           +  AL         + +DI+  A  +   N+  N V    D + +D  S ++    DVI+
Sbjct: 52  IITALSTLLKSSYHLAIDINKYACSVTMQNSHYNKVI--VDVINTDLTSCLKLNCIDVII 109

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRI-SLDGGIDGLSHYRTIADGVSRHLNKDGL--CSVE 226
            NPPY+ +        E+   DP   S  GG++G            R L+  G     V 
Sbjct: 110 FNPPYVVTP-----NDEIYKEDPLTKSWAGGVNGRVIIDKFLHVFDRVLSSKGFGYLLV- 163

Query: 227 IGYNQKVDVVRIFESRKLF 245
           I  NQ  +++   + +   
Sbjct: 164 IKENQPHEIITKLKEKNYK 182


>gi|269468793|gb|EEZ80397.1| 16S RNA G1207 methylase RsmC [uncultured SUP05 cluster bacterium]
          Length = 196

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 33/167 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++        F PR      +D      L  ++ ++  + LDLG G G + LA+ K  P
Sbjct: 23  HDLTFKTRWGVFSPRA-----IDEGTQLFLKHVDIQESDKCLDLGCGYGPIGLAVAKSCP 77

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESV 178
             +   VD    A+E++ +NA  N  +       SD FS+V     FD ++SN P     
Sbjct: 78  RGEVHMVDKDFIAVELSNTNAKLNN-TNNAQAYLSDAFSAVGKTDYFDQVLSNVP----- 131

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +V              G      I       L   G  + 
Sbjct: 132 ------AKV--------------GREQLSIILYDAYDALKPGGKITF 158


>gi|328865954|gb|EGG14340.1| hypothetical protein DFA_12110 [Dictyostelium fasciculatum]
          Length = 707

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 13/180 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGV 127
            D +EP  ++ L + +AL   L  ++  +   ++++G+G+G V   L K        +  
Sbjct: 25  KDVYEPAQDSYLFI-NALKKDLDDLKLLNPSFVIEIGSGSGFVISYLAKILENNGYFMST 83

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLG 184
           DI+  A  ++   A  N VS   D + + + + +E   G  DV++ NPPY+ +       
Sbjct: 84  DINPIAARVSSRTATHNNVS--LDVINTSFLTGIERVKGKVDVLLFNPPYVPTE-----S 136

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRK 243
            E+ D     S  GGIDG      +   +   L+  G+  +  +  N    V  I  +  
Sbjct: 137 EEIEDGGIAASWAGGIDGREVIDKLLPQIDSILSPKGVFYMVLVEENHPKQVAAILANIG 196


>gi|217965657|ref|YP_002351335.1| methyltransferase small domain superfamily [Listeria monocytogenes
           HCC23]
 gi|217334927|gb|ACK40721.1| methyltransferase small domain superfamily [Listeria monocytogenes
           HCC23]
 gi|307569795|emb|CAR82974.1| ribosomal RNA small subunit methyltransferase C [Listeria
           monocytogenes L99]
          Length = 201

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|154506312|ref|ZP_02043050.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149]
 gi|153793401|gb|EDN75821.1| hypothetical protein RUMGNA_03860 [Ruminococcus gnavus ATCC 29149]
          Length = 232

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 76/195 (38%), Gaps = 29/195 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++    + F    +  +L D A        + +   ++LDLGTGTG + + L  ++  
Sbjct: 18  GLQIIQDPERFCFGIDAVMLSDFA--------KVKPGEKVLDLGTGTGILPILLSAKTRG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
              +G++I  ++ ++A+ +   N + E+ + +Q D   +        FDVIV+NPPY+ +
Sbjct: 70  EHFIGLEIQKESADMARRSIEWNHLQEKIEIVQGDIKEAAALFKPTFFDVIVTNPPYMLN 129

Query: 178 VIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSVEIGYNQKV 233
                   + +     +   +LD           I     + L    G   +     +  
Sbjct: 130 QHGLQNPGDAKAIARHEILCTLD----------DILRESKQLLADGKGRFYMIH---KPF 176

Query: 234 DVVRIFESRKLFLVN 248
            +  I      + + 
Sbjct: 177 RLAEILTKMSEYKIE 191


>gi|255326353|ref|ZP_05367437.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
 gi|255296570|gb|EET75903.1| methyltransferase small [Rothia mucilaginosa ATCC 25296]
          Length = 207

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 12/152 (7%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +       +    ++T+++      P     +D   A  L         R+LD+G G 
Sbjct: 18  RPVQ-----VELAGRKVTVTTANGIFSPSG---IDKGTAILLQEAPDPQGERMLDIGCGW 69

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + L L   +P  +   VD++ +++ + + NA   G+         +     E  FD I
Sbjct: 70  GPITLTLAMLAPDAQVHAVDVNSRSISLTERNAAALGLP-NVTVGTPESVDP-ELRFDTI 127

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            SNPP    V  + L   +  + PR++  G  
Sbjct: 128 WSNPPI--RVGKEVLHEILLTWLPRLAPGGDA 157


>gi|329297697|ref|ZP_08255033.1| methyltransferase small [Plautia stali symbiont]
          Length = 249

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+G G+G + L L + +P       V++   A   A+ N   +  + R 
Sbjct: 43  WAPVAGVRRILDIGCGSGLIALMLAQRTPDDVSIDAVELERSAAAQAQENVAASPWAHRI 102

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                D   W    E  + +IVSNPP+    +        RD     +       L H  
Sbjct: 103 AVHAQDIVSWREQAEKRYSLIVSNPPFFTPGMASASVE--RDTARSTAT------LDHP- 153

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD---YGGND--RVLLF 262
           T+    ++ L ++GL  V +  +   +++ +  +    L     D   Y      R++L 
Sbjct: 154 TLLRCAAQLLEEEGLFCVVLPADAGENLIALARAEGWHL-RYRYDVAPYAQRPPNRLVLG 212


>gi|309802490|ref|ZP_07696596.1| methyltransferase small domain protein [Bifidobacterium dentium
           JCVIHMP022]
 gi|308220890|gb|EFO77196.1| methyltransferase small domain protein [Bifidobacterium dentium
           JCVIHMP022]
          Length = 216

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E       LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+       
Sbjct: 70  EPAQEGTFLDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAAT 129

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +    +   FD+I SNPP    +  + L   +  + PR  L+ G       +   +  
Sbjct: 130 ADEIPHDL--TFDLIWSNPPI--RIGKEALHELLMAWLPR--LNAGGAAYLVVQK--NLG 181

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           S  L      + ++G     +V +   ++   ++   K
Sbjct: 182 SDSLIP--WLATQLGD--GYEVSKYASAKGFRVIEVMK 215


>gi|300715160|ref|YP_003739963.1| ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
           Eb661]
 gi|299060996|emb|CAX58103.1| Ribosomal RNA small subunit methyltransferase C [Erwinia billingiae
           Eb661]
          Length = 344

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 28/161 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +      F  R      +D+     L  ++     ++LD+G G G +   L   SP  
Sbjct: 167 LTIKTLPGVFS-RDG----LDAGSNLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKV 221

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +    D++  A+E +K+    N +    +   S+ +S V G +D+I+SNPP+        
Sbjct: 222 RLFMTDVNAAAIEASKATLAANDLEG--EVFASNVYSDVNGRYDMIISNPPFH------- 272

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                         DG    L   +T+  G  +HLN  G  
Sbjct: 273 --------------DGMQTSLDAAQTLIRGAVKHLNMGGEL 299


>gi|302535283|ref|ZP_07287625.1| rRNA or tRNA methyltransferase [Streptomyces sp. C]
 gi|302444178|gb|EFL15994.1| rRNA or tRNA methyltransferase [Streptomyces sp. C]
          Length = 504

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 16/134 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G   L   + +   +    D++ +ALE  +     +G  E  + L    F  V
Sbjct: 165 LDLGTGSGIQALHAAQHA--TRVTATDVNPRALEFTRLTLALSGAPE-AELLAGSLFEPV 221

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +  +D+IVSNPP++ S                   DGG+ G    RT+      HLN  
Sbjct: 222 GDATYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQAGDHLNPG 270

Query: 221 GLCSVEIGYNQKVD 234
           G     +G  Q V+
Sbjct: 271 GYAQF-LGNWQHVE 283


>gi|126663015|ref|ZP_01734013.1| hypothetical protein FBBAL38_06675 [Flavobacteria bacterium BAL38]
 gi|126624673|gb|EAZ95363.1| hypothetical protein FBBAL38_06675 [Flavobacteria bacterium BAL38]
          Length = 234

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 14/158 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   +LD+G GTG + L L + S   +   ++I   A E    N  ++   ++     +
Sbjct: 33  NNPYNVLDIGAGTGILSLMLAQRSNAEQIDAIEIDEDAYEQCVENFESSPWGDKLFCFHA 92

Query: 156 DWFSSVEGL---FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
                V+     +D+I+SNPP Y E    +    ++  F+         D L     +  
Sbjct: 93  GLDEFVDEPEDEYDLIISNPPFYTEDYKTENTSRDLARFE---------DALPF-EELIK 142

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             +  L+ +G+ SV I Y ++   V + +   LF +  
Sbjct: 143 AAALLLSDNGIFSVIIPYKEEERFVSLCKELDLFPLKI 180


>gi|306822412|ref|ZP_07455790.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679]
 gi|304553957|gb|EFM41866.1| 16S rRNA methyltransferase [Bifidobacterium dentium ATCC 27679]
          Length = 219

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E       LDLG G G + L +  ESP      +D++ +ALE+ K NA  NG+       
Sbjct: 73  EPAQEGTFLDLGCGWGPIALTMAFESPKADVWALDVNERALELTKRNAEINGIGTIHAAT 132

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +    +   FD+I SNPP    +  + L   +  + PR  L+ G       +   +  
Sbjct: 133 ADEIPHDL--TFDLIWSNPPI--RIGKEALHELLMAWLPR--LNAGGAAYLVVQK--NLG 184

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           S  L      + ++G     +V +   ++   ++   K
Sbjct: 185 SDSLIP--WLATQLGD--GYEVSKYASAKGFRVIEVMK 218


>gi|308321765|gb|ADO28025.1| n(6)-adenine-specific DNA methyltransferase 1 [Ictalurus furcatus]
          Length = 217

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 10/179 (5%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVD 128
           + +EP  ++ LL+D+ L      + + + V  L++G+G+G V   L          +  D
Sbjct: 17  EVYEPAEDSFLLIDT-LEKDADLLLRSEPVVCLEVGSGSGVVSAFLASVTGAGALYLCTD 75

Query: 129 ISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           ++  A + A   +  N +  +     L       + G+ DV++ NPPY+ +        E
Sbjct: 76  LNPAAAQCAAETSRCNNLDLQPVITDLSECLLPRLNGMVDVLLFNPPYVVTP-----SEE 130

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           V       S  GG  G          VS+ L+K GL  +  +  N   +++ +     L
Sbjct: 131 VGSHGIEASWAGGKRGREVMDRFFPMVSQLLSKQGLFYLVTVSDNNPEEILSLLGESGL 189


>gi|255024743|ref|ZP_05296729.1| hypothetical protein LmonocyFSL_17011 [Listeria monocytogenes FSL
           J1-208]
          Length = 196

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 52  ETKTGKILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 110

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 111 SSVYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 145

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 146 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 185


>gi|229829476|ref|ZP_04455545.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM
           14600]
 gi|229791907|gb|EEP28021.1| hypothetical protein GCWU000342_01566 [Shuttleworthia satelles DSM
           14600]
          Length = 254

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++  S   F    +  LL   A          ++  R+LDLGTGTG + + +      
Sbjct: 22  GYQIIQSPSRFCFGMDAVLLAAFA--------NNKEGDRVLDLGTGTGVIPILMEARYGG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   ++I   + ++A+ +A  NG+ +R + ++ D   + E      FDV+  NPPY+ +
Sbjct: 74  AEYKALEIQADSCDMARRSARLNGLEDRIEIVEGDLTRAHEIFGPASFDVVTCNPPYMTN 133

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     + +   +   SL            +    +R L   G      
Sbjct: 134 KHGLTNPSGPMAIARHELLCSL----------EDVVRETARLLRPGGHSYFVH 176


>gi|283458471|ref|YP_003363097.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
 gi|283134512|dbj|BAI65277.1| 16S RNA G1207 methylase RsmC [Rothia mucilaginosa DY-18]
          Length = 207

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 30/210 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +       +    ++T+++      P     +D   A  L         R+LD+G G 
Sbjct: 18  RPVQ-----VELAGRKVTVTTANGIFSPSG---IDKGTAILLQEAPDPQGTRMLDIGCGW 69

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + L L   +P  +   VD++ +++ + + NA   G+S        +     E  FD I
Sbjct: 70  GPITLTLAMLAPQAQVHAVDVNSRSIGLTERNAAALGLS-NVTVGTPESVDP-ELRFDTI 127

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-------GLSHYRTIADGVSRHLNKDG 221
            SNPP    V  + L   +  + PR++  G          G    +   D     L+   
Sbjct: 128 WSNPPI--RVGKEVLHEILLTWLPRLAPGGDAYLVVQKNLGSDSLQKWMDAQLEELHPG- 184

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               E       +V R   S+   ++   +
Sbjct: 185 ----EF------EVSRYATSKGFRILQVHR 204


>gi|307246943|ref|ZP_07529008.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307255925|ref|ZP_07537726.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307260378|ref|ZP_07542085.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306852228|gb|EFM84468.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306861193|gb|EFM93186.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306865629|gb|EFM97510.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 329

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 32/173 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +   ++ +      F     +  L D      L    K D ++  +LDLG G G + 
Sbjct: 150 WKSYRLQDLNIFALPAVFS----SAEL-DDGTQLLLSTFNKADRLKGKVLDLGCGAGVIG 204

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            +L ++    K    DI   ALE ++     N +      + SD FS +E  FD+IVSNP
Sbjct: 205 ASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEG--TVVASDVFSHIEERFDLIVSNP 262

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P+ + +                              +     + LN+ G   +
Sbjct: 263 PFHDGIDTA---------------------YRAVEDLIAQAKQRLNRGGELLI 294


>gi|300311844|ref|YP_003775936.1| methylase of polypeptide chain release factors protein
           [Herbaspirillum seropedicae SmR1]
 gi|300074629|gb|ADJ64028.1| methylase of polypeptide chain release factors protein
           [Herbaspirillum seropedicae SmR1]
          Length = 395

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 28/184 (15%)

Query: 51  IHRILGWRDFY--NVRL-----TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           +  ++G  ++    V +      +        P     VD     +LP  E        D
Sbjct: 167 LQGLIGAHEWRKKGVEIGALGARIHPWYGVFSPVRGEYVDLVAQAALPSTE-----LAFD 221

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G+G +  A+L +    K V  D+  +AL  A+ N    G+ ++    ++D F   EG
Sbjct: 222 IGVGSGVLS-AVLAQRGVRKIVATDMDPRALACARQNLQQLGLHQQVQLQEADLFP--EG 278

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              ++V NPP++ +     +   V D D R+ L G ++GL          ++HL     G
Sbjct: 279 RAPLVVCNPPWLPARPSSPIEHAVYDPDSRM-LLGFLNGL----------AQHLTPQGEG 327

Query: 222 LCSV 225
              +
Sbjct: 328 WLIM 331


>gi|292898288|ref|YP_003537657.1| ribosomal RNA small subunit methyltransferase C [Erwinia amylovora
           ATCC 49946]
 gi|291198136|emb|CBJ45241.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) [Erwinia amylovora
           ATCC 49946]
          Length = 342

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 182 DIGSQLLLSTLKPHMKGKVLDVGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 242 ANQLEG--DVFASNVWSDISGRFDMIMSNPPFH---------------------DGVQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 279 LDAAQTLIRGAVSHLNTGGEL 299


>gi|226228549|ref|YP_002762655.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226091740|dbj|BAH40185.1| putative methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 556

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 62/167 (37%), Gaps = 18/167 (10%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSL----PRIEKRDVVRILDLGTGTGAVCLALLKES 119
           R T       P      LV  A+  S+      +      R L+L +GTG   L      
Sbjct: 166 RPTFGEKGVRPEDGATDLVYPAITNSVRVFVSTLPPSRGKRYLELCSGTGIAALDAAHRG 225

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
                  +DI+ ++   A  NA  N +      LQ D ++ VEG  FDVI ++PPY+ + 
Sbjct: 226 AE-HAWAIDITARSTHFAAFNARMNALP-NVTALQGDLYAPVEGQQFDVISAHPPYVPAT 283

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +             DGG DG    R I   +   L  +G+   
Sbjct: 284 STALIYR-----------DGGEDGEQISRAIMARLPDFLAPEGIFHC 319


>gi|269929311|ref|YP_003321632.1| methylase [Sphaerobacter thermophilus DSM 20745]
 gi|269788668|gb|ACZ40810.1| methylase [Sphaerobacter thermophilus DSM 20745]
          Length = 566

 Score = 82.8 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 24/196 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESP 120
              + +    F P     +L  +    +            +LDLGTG+G   +  +    
Sbjct: 364 GRDIVVLPGVFNP-----VLFRTGAYLAKVAESFVPLGGSVLDLGTGSGVGAI--VAARR 416

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             + V VDI+  A+  A+ NA +NGV++R +  Q D F+ V G  FD+++ NPP+     
Sbjct: 417 AARVVAVDINPAAVRCAQINAASNGVNDRVEVRQGDLFAPVAGERFDLVLFNPPFYRGTP 476

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVVRI 238
            D      R                     A G++ HL       V +  +      +R 
Sbjct: 477 RDDADRAWRSE-------------DVAERFAAGLAAHLAPGASALVILSSDGDAPGFLRA 523

Query: 239 FESRKLF-LVNAFKDY 253
             S  L   V A +D 
Sbjct: 524 AASAGLAIEVIAERDL 539


>gi|38233996|ref|NP_939763.1| putative transferase [Corynebacterium diphtheriae NCTC 13129]
 gi|38200258|emb|CAE49942.1| Putative transferase [Corynebacterium diphtheriae]
          Length = 511

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 15/150 (10%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P  +  L V +A    L    +  V  +LDLGTG+G   L  L+ +        D+  +
Sbjct: 135 VPGKDHVLGVGAASLSLLATTPRSPVNSVLDLGTGSGVQALGQLRHAR--SVTATDVHPR 192

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL+ A+  A   G     + L   WF  ++   FD IV+NPP++          E+    
Sbjct: 193 ALDFAE--ATFAGAHFDVEILDGSWFEPIKNRKFDRIVANPPFVVG------PPEIE--- 241

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             +  D G+D      T+  G   HL+ +G
Sbjct: 242 -HVYRDSGLDLDGATETVVRGAVDHLHSNG 270


>gi|94311751|ref|YP_584961.1| methyltransferase small [Cupriavidus metallidurans CH34]
 gi|93355603|gb|ABF09692.1| methylase of polypeptide chain release factors [Cupriavidus
           metallidurans CH34]
          Length = 379

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 33  RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR 92
           R+   L  A     K   I   LG R        +        P     +D      LP 
Sbjct: 150 RELLGLIGAFEWRKKGIEIPA-LGER--------IHPWYGVFSPVRGEYIDLVAKEPLP- 199

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                     D+GTGTG +  ALL +    + VG D   +AL  A++N    G++   + 
Sbjct: 200 ----SGTLAFDIGTGTGVLA-ALLAQRGVKRVVGTDQDARALGNARANIERLGLTGDVEI 254

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +++D F   EG   ++V NPP++ +     +   V D D R+            R   +G
Sbjct: 255 IEADLFP--EGRAPLVVCNPPWVPARPSSPIEHAVFDPDSRM-----------LRGFLNG 301

Query: 213 VSRHLNKD--GLCSV 225
           ++ HL  D  G   +
Sbjct: 302 LAAHLTPDGQGWLIL 316


>gi|307299352|ref|ZP_07579153.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915148|gb|EFN45534.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 202

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 39/169 (23%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++         F        + LL+++ +              ILDLG G GAV + L  
Sbjct: 30  HSYTFKSPEGVFAFGKADRASLLLIENCIL--------EGQESILDLGCGYGAVGITLKL 81

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
           E P  K    D++ +AL  +K NA  + +    D  + D FS  E   FD I+SNPP   
Sbjct: 82  EHPDLKLHMSDVNTRALTFSKINARDHNILA--DIRKGDLFSPWEKTSFDSILSNPPIAA 139

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                    G + ++ +       LN+ G   +
Sbjct: 140 -------------------------GKAVWQRMITEAPEFLNEGGSLQI 163


>gi|303250439|ref|ZP_07336636.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251480|ref|ZP_07533387.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302650427|gb|EFL80586.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860944|gb|EFM92950.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 329

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 NIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|303251779|ref|ZP_07337950.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307249080|ref|ZP_07531087.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307251279|ref|ZP_07533199.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|302649209|gb|EFL79394.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306854368|gb|EFM86564.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306856677|gb|EFM88813.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 329

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 NIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|260775422|ref|ZP_05884319.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608603|gb|EEX34768.1| predicted O-methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 239

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 10/157 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + +    +LD+GTGTG + L   + +P      +DI   AL+ +K N  ++  S R  
Sbjct: 37  WCDIKQANTLLDIGTGTGLLALMCAQRNPDCVIDAIDIDQHALQASKENFTSSPWSSRLS 96

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            L+ D  S   E  +D IV NPPY  S               R +L      LSH   + 
Sbjct: 97  LLEGDVLSFPFETSYDAIVCNPPYFNSGEHAQNQQRATA---RHTLT-----LSH-EALL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
           +   + L+ DG     +   +    + + E+    L 
Sbjct: 148 ERCFKLLSTDGQAWFVLPEAEGRMFISLAETLGWHLA 184


>gi|257870490|ref|ZP_05650143.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum
           EG2]
 gi|257804654|gb|EEV33476.1| rRNA small subunit methyltransferase C [Enterococcus gallinarum
           EG2]
          Length = 200

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 80/245 (32%), Gaps = 62/245 (25%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           H    +P++  D  Q  F        LK +    +     F    +   S       +  
Sbjct: 4   HYYTENPETAHDFEQWSFE-------LKGKKFQFVTDSGVFSRETVDYGSRVLI---DAF 53

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
              D                 ILD+G G G + L+L   S       +DI+ +A+++A+ 
Sbjct: 54  EWADL------------PEGTILDVGCGYGPIGLSLAYASQRP-VEMIDINQRAVDLAQG 100

Query: 140 NAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA  NG+ E  D   S+ + ++  G +  I+SNPP                         
Sbjct: 101 NAKRNGI-ENADIHASNIYETLHQGEYAAILSNPPIRA---------------------- 137

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIF-------ESRKLFL 246
              G      I  G    L   G  ++ I   Q        + + F       + +  ++
Sbjct: 138 ---GKEVVHEILTGALPLLKTGGTLTIVIQKKQGAPSAQKKMQQTFGNAEIIKKDKGYYI 194

Query: 247 VNAFK 251
           + ++K
Sbjct: 195 IQSYK 199


>gi|326913204|ref|XP_003202930.1| PREDICTED: hemK methyltransferase family member 2-like [Meleagris
           gallopavo]
          Length = 218

 Score = 82.8 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 76/198 (38%), Gaps = 10/198 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGV 127
            D +EP  +T LL+D AL     ++ +  +   L++G+G+G V   L          +  
Sbjct: 21  RDVYEPAEDTFLLLD-ALERDATQLRQAGIDICLEIGSGSGVVSAFLASIIGASALYLCT 79

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A       A  N V  +     L       + G+ D+++ NPPY+ +        
Sbjct: 80  DINPMAAYCTLETAQLNNVHLQPVITDLVKGLSPRLNGMVDLLLFNPPYVVTP-----SE 134

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV+      S  GG +G      +   V+  L+  GL  +  I  N   +++   +   L
Sbjct: 135 EVQSHGIEASWAGGKNGREVMDRVFPLVADLLSTRGLFYLVTIKENNPDEILETMKKHGL 194

Query: 245 FLVNAFKDYGGNDRVLLF 262
                     G + + + 
Sbjct: 195 EGTQLLSRQAGQEMLTIL 212


>gi|319139447|ref|NP_001187624.1| n(6)-adenine-specific DNA methyltransferase 1 [Ictalurus punctatus]
 gi|308323528|gb|ADO28900.1| n(6)-adenine-specific DNA methyltransferase 1 [Ictalurus punctatus]
          Length = 246

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGV 127
           S+ +EP  ++ LL+D+ L      + +   V  L++G+G+G V   L          +  
Sbjct: 16  SEVYEPAEDSFLLIDT-LEKDADLLLRSKPVVCLEVGSGSGVVSAFLASVTGAGALYLCT 74

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           D++  A +     +  N +  +     L       + G+ DV++ NPPY+ +        
Sbjct: 75  DLNPAAAQCTAETSRCNNLDLQPVITDLTECLLPRLNGMVDVLLFNPPYVVTP-----SE 129

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL 244
           EV       S  GG  G          V + L+K GL  +  +  N   +++ +     L
Sbjct: 130 EVGSHGIEASWAGGKRGREVMDRFFPMVLQLLSKQGLFYLVTVSDNNPEEILSLLGESGL 189

Query: 245 FLVNAFKDYGGNDRVLLFC 263
                     G +++ +  
Sbjct: 190 RGEVCLSRQAGREKLFILR 208


>gi|159149040|dbj|BAF92588.1| methyltransferase [Streptomyces pactum]
 gi|212379246|gb|ACJ24862.1| HemK family methyltransferase [Streptomyces pactum]
          Length = 358

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +RDV   LDLG GTG + L+  +       V VD++ +    A  NA  NG+ ER   ++
Sbjct: 147 RRDVRTALDLGCGTGILGLSAARN--GADVVSVDVNPECTAAATVNAHINGLGERLTAVE 204

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  S  ++  FD+++SNPP +            R     ++ + G+DGL  +  +   V
Sbjct: 205 GDIMSLDLDRRFDLVISNPPCLPLR---------RGSLGWLAGEAGLDGLEFFWELLRRV 255

Query: 214 SRHLNKDGLCSV 225
              L  +G   +
Sbjct: 256 PGLLTGEGEALL 267


>gi|126325341|ref|XP_001373458.1| PREDICTED: similar to putative N5-methyl-Gln methyltransferase
           [Monodelphis domestica]
          Length = 249

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 73/205 (35%), Gaps = 20/205 (9%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +HR +G   F         + +EP  +T L      A      E   V   L++G+G+G
Sbjct: 14  PLHRHVGQGAFR--------EVYEPAEDTFL---LLDALEAAAAELMGVEICLEIGSGSG 62

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFD 166
            V   L     P    +  DI+ KA +     A+ N V  +     L       +    D
Sbjct: 63  VVSAFLASIIGPQALYMCTDINPKAADCTLETALCNKVHIQPIITDLAKGLLPRLFSKVD 122

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++V NPPY+ +        EV       +  GG +G           +  L+++G   + 
Sbjct: 123 LLVFNPPYVVTP-----SEEVGSHGIEAAWAGGRNGREVMDRFFPLAADLLSREGFFYLV 177

Query: 227 -IGYNQKVDVVRIFESRKLFLVNAF 250
            I  N   +++   +   L  +   
Sbjct: 178 AIKENNPDEIMETMKKYGLHGITVL 202


>gi|259907286|ref|YP_002647642.1| 16S ribosomal RNA m2G1207 methyltransferase [Erwinia pyrifoliae
           Ep1/96]
 gi|224962908|emb|CAX54389.1| Ribosomal RNA small subunit methyltransferase C [Erwinia pyrifoliae
           Ep1/96]
          Length = 342

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++     ++LD+G G G +   L   SP  +    D++  A+  +K+   
Sbjct: 182 DIGSQLLLSTLKPHMKGKVLDMGCGAGVLSAMLASFSPKVRLTLTDVNAAAIASSKATLT 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    D   S+ +S + G FD+I+SNPP+                      DG    
Sbjct: 242 ANQLEG--DVFASNVYSDISGRFDMIISNPPFH---------------------DGVQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L   +T+  G   HLN  G  
Sbjct: 279 LDAAQTLIRGAVSHLNTGGEL 299


>gi|167757655|ref|ZP_02429782.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
 gi|237735202|ref|ZP_04565683.1| 16S rRNA m(2)G 1207 methyltransferase [Mollicutes bacterium D7]
 gi|167702652|gb|EDS17231.1| hypothetical protein CLORAM_03205 [Clostridium ramosum DSM 1402]
 gi|229381978|gb|EEO32069.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. D7]
          Length = 197

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 68/205 (33%), Gaps = 36/205 (17%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTG 107
           E    I     +    L  +SD       ++ ++D      L  IE  +    +LD+G G
Sbjct: 14  EPEQFIF---TYRGKELIFTSDHGVF---SKKMIDFGSRVLLDAIELDEGKSTLLDVGCG 67

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G   +AL    P  +   +D++ +AL +AK N   N +        S  + +V   +DV
Sbjct: 68  YGTFGVALKSAYPALEIDMIDVNERALLLAKQNLAANNLEANV--YLSSVYENVTNKYDV 125

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IV+NPP                            G      I      HLN  G   V I
Sbjct: 126 IVTNPPIRA-------------------------GKETVTKILVEAKEHLNLHGEIWVVI 160

Query: 228 GYNQK-VDVVRIFESRKLFLVNAFK 251
              Q      +  ES      N  K
Sbjct: 161 QKKQGAPSAKKNLESV-FGNANVVK 184


>gi|322692228|gb|EFY84166.1| hypothetical protein MAC_09792 [Metarhizium acridum CQMa 102]
          Length = 225

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 20/163 (12%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L +    + P+   E L       +LP I K      L++G G+G + L L       K
Sbjct: 34  QLQIHPSVYSPKYFPETL---WYGQNLPSIVK--GGSFLEIGVGSGLISLHLAAS--GSK 86

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-IESVIVDC 182
            VG DI+  A+E  + N   N     F    SD F  ++G FD I  N P+ I++ + D 
Sbjct: 87  VVGADINPFAVETTQQNFSRNQQEGTFIV--SDIFDKIDGRFDFIFWNHPWQIDASVPDE 144

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L  E + FD    L     G    +      + +L ++G   +
Sbjct: 145 LKTE-KTFD----L-----GYQLLQRFVAESANYLTENGKVLL 177


>gi|315275374|ref|ZP_07869513.1| methyltransferase [Listeria marthii FSL S4-120]
 gi|313615699|gb|EFR88991.1| methyltransferase [Listeria marthii FSL S4-120]
          Length = 201

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKALPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|41615032|ref|NP_963530.1| hypothetical protein NEQ238 [Nanoarchaeum equitans Kin4-M]
 gi|40068756|gb|AAR39091.1| NEQ238 [Nanoarchaeum equitans Kin4-M]
          Length = 175

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 28/158 (17%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           +EP  +T LL+  A        +K    +IL++G G+G +   LLK+       GV+I  
Sbjct: 4   YEPAEDTFLLLKWA--------KKFAKGKILEIGVGSGYILENLLKKGFDA--YGVEIDK 53

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
             L+  K         +R     SD FS+V   +D+I+ NPPY+     +         D
Sbjct: 54  DVLKYLKE-----KFKDRV--WYSDLFSNVNDKYDLIIFNPPYLPEEGWE---------D 97

Query: 192 PRISL--DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +  L   GG +G        + +  +L + G   + +
Sbjct: 98  EKTKLWTVGGKEGNEIILKFIEQLPFYLKEGGKAIIIV 135


>gi|229491274|ref|ZP_04385100.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121]
 gi|229321813|gb|EEN87608.1| rRNA or tRNA methylase [Rhodococcus erythropolis SK121]
          Length = 499

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 67/184 (36%), Gaps = 23/184 (12%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +  L V  A    L       V  +LDLGTG G    AL   +        DI+ +A+++
Sbjct: 139 DHVLGVGHASLSLLQATPTARVGSVLDLGTGCGIQ--ALHANTYADSVTATDINQRAVDL 196

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             +    N +    + LQ  WF  VEG  FD +V+NPP++          E R       
Sbjct: 197 TAATMALNRLD--VELLQGSWFEPVEGRTFDQVVANPPFV--------VGEARVH--HTY 244

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRIFESRKLFLVN 248
            D G+D       +      +LN  G          VE G + +  +     +  +    
Sbjct: 245 RDSGLDLDGASELMISQSIDYLNPGGTAALLASWVHVE-GQDWRSRIASWLPAHGVDAWV 303

Query: 249 AFKD 252
             +D
Sbjct: 304 VQRD 307


>gi|149912231|ref|ZP_01900809.1| hypothetical protein PE36_22685 [Moritella sp. PE36]
 gi|149804690|gb|EDM64742.1| hypothetical protein PE36_22685 [Moritella sp. PE36]
          Length = 247

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 16/160 (10%)

Query: 98  VVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +++LD+GTG+G + L L +      + + +DI   A + AK N   +            
Sbjct: 44  PLKVLDIGTGSGLISLMLAQRCQGDMQAIAIDIDVSACQQAKKNIDNSPWPSSIAVKHVA 103

Query: 157 W------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                  +      FD++VSNPPY           + R             G   ++ + 
Sbjct: 104 LQAFTQAYKDEPAKFDLVVSNPPYFIHG--QNFTDDARKIARHT-------GSLTHQELV 154

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           D   + L  +G  ++ + Y    ++V   +      +   
Sbjct: 155 DCALQLLAPNGRIALVLPYTSGCELVTYCQQLGNLQITCL 194


>gi|238793780|ref|ZP_04637401.1| Methyltransferase small [Yersinia intermedia ATCC 29909]
 gi|238726844|gb|EEQ18377.1| Methyltransferase small [Yersinia intermedia ATCC 29909]
          Length = 259

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + + S       GV++  +A   A SNA  +  +ER 
Sbjct: 53  WVPVEKARKVLDIGCGSGLIALMIAQRSTSEVLIDGVELEPEAARQASSNAALSPWAERV 112

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 113 CIYEQDVHQFAENHSHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 163

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + ++G+  V + ++  +++ R    +  + V      +D  G    R+LL
Sbjct: 164 ALLNCAEKLITENGVFCVVLPHDLGIELSRRAVQQNWY-VRCQVDIRDRPGKPLNRMLL 221


>gi|223043052|ref|ZP_03613100.1| methyltransferase small domain superfamily [Staphylococcus capitis
           SK14]
 gi|222443906|gb|EEE50003.1| methyltransferase small domain superfamily [Staphylococcus capitis
           SK14]
          Length = 202

 Score = 82.5 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 32/192 (16%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           ++  T  +  F   R +     D  +   L          I D+G G G + L + K SP
Sbjct: 26  HLEFTTDTGVFSKDRVDYGS--DLLIKTFLKEHPPGPSKYIADVGCGYGPIGLTIAKVSP 83

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVI 179
             +   +D++ +AL +   N + N + E  + ++SD  S V +  FD I++NPP      
Sbjct: 84  HHQLYMLDVNNRALALTGMNKIKNQI-ENAEIIESDCLSGVSDQQFDYILTNPPIRA--- 139

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
                                 G      I +     L   G   V I   Q      + 
Sbjct: 140 ----------------------GKDVVHRIFEEAYCKLKDQGALYVVIQKKQGMPSAKKK 177

Query: 239 FESRKLFLVNAF 250
            +      V   
Sbjct: 178 MQEC-FNHVEVV 188


>gi|167587650|ref|ZP_02380038.1| Methyltransferase [Burkholderia ubonensis Bu]
          Length = 294

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 18/168 (10%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSAL 86
           SV+  R+   L  A     K   I  + G        +      F P R E   LV    
Sbjct: 141 SVVSLRELLGLVGAHEWRKKGVPIPALGGAA------IHPHYGVFSPVRGEYVELV---- 190

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                R          D+GTGTG +  A+L      + V  D   +AL  A+ N    G 
Sbjct: 191 ----ARAPLPADTLAFDIGTGTGVLA-AVLAARGVKRVVATDQDSRALACARENVERLGC 245

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           + + D +++D F +  G   ++V NPP++ +     +   V D D R+
Sbjct: 246 AAQVDVVEADLFPA--GRAPLVVCNPPWVPARPSAPIEYAVYDPDSRM 291


>gi|307264716|ref|ZP_07546296.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870028|gb|EFN01792.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 231

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 32/171 (18%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVC 112
           W+ +   ++ +      F     +  L D      L    K D ++  +LDLG G G + 
Sbjct: 52  WKSYRLQDLNIFALPAVFS----SAEL-DDGTQLLLSTFNKADRLKGKVLDLGCGAGVIG 106

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            +L ++    K    DI   ALE ++     N +      + SD FS++E  FD+IVSNP
Sbjct: 107 ASLKQQFEKIKLTMSDIHAMALESSRRTLAENALDG--TVVASDVFSNIEERFDLIVSNP 164

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+ + +                              +     + LN+ G  
Sbjct: 165 PFHDGIDTA---------------------YRAVEDLIAQAKQRLNRGGEL 194


>gi|126439089|ref|YP_001060611.1| putative methyltransferase [Burkholderia pseudomallei 668]
 gi|126218582|gb|ABN82088.1| putative methyltransferase [Burkholderia pseudomallei 668]
          Length = 378

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 63/184 (34%), Gaps = 31/184 (16%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILD 103
             K   I  + G R      +      F P R E   LV         R          +
Sbjct: 159 RKKGVPIAALGGER------IHPHYGVFSPVRGEYVALV--------ARAPLPSTSLAFE 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G
Sbjct: 205 IGVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DG 261

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--G 221
              +IV NPP++ +        E   +DP              +    G++ HL     G
Sbjct: 262 RAPLIVCNPPWVPAR--PSSPFEYAVYDPDS---------RMLKGFLAGLAAHLAPGGEG 310

Query: 222 LCSV 225
              +
Sbjct: 311 WLIL 314


>gi|315301184|ref|ZP_07872448.1| methyltransferase [Listeria ivanovii FSL F6-596]
 gi|313630454|gb|EFR98323.1| methyltransferase [Listeria ivanovii FSL F6-596]
          Length = 201

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K     +   VD++ +ALE+AK NA  N  +      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTIAKAFADSQMEMVDVNLRALELAKENAEINKTTNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  +++V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYNNVTANDYQAIISNPPIRA-------------------------GKKVVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL ++G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLRENGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|254511958|ref|ZP_05124025.1| methyltransferase small [Rhodobacteraceae bacterium KLH11]
 gi|221535669|gb|EEE38657.1| methyltransferase small [Rhodobacteraceae bacterium KLH11]
          Length = 256

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 67/186 (36%), Gaps = 19/186 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   R+ L    ++PR      VD  L      I       +L+LG G GA  L LL  
Sbjct: 13  DFLGGRIRL----WQPRTGYRAGVDPVL--LAAAIPANPGQSVLELGCGAGAAILCLLAR 66

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIE 176
            P  +  GV+I      +A+ NA  N          L++      +  FD +++NPPY  
Sbjct: 67  VPDLQATGVEIQPAYAALARRNATRNAAPLTVVEADLKALPDDLRQKQFDHVIANPPYYR 126

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                      R    R++L G    L+ +    +  +R L   G         +   + 
Sbjct: 127 PGAHSPAEDPGR----RMAL-GEETPLADW---INVAARRLAPRGYL---HMIQKADRLP 175

Query: 237 RIFESR 242
            +  + 
Sbjct: 176 DMLAAC 181


>gi|226325840|ref|ZP_03801358.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758]
 gi|225205964|gb|EEG88318.1| hypothetical protein COPCOM_03653 [Coprococcus comes ATCC 27758]
          Length = 251

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 26/189 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  S   F         +D+ L  +  +++  +   +LDLGTGTG + + L  ++  
Sbjct: 18  GYEIIQSPGRFCFG------MDAVLLSAFAKVKAGEC--VLDLGTGTGILPILLAAKTKG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI-- 175
               G++I  ++ ++A  +   N + E+ D +  D   +     +G  DVI +NPPY+  
Sbjct: 70  KHFTGLEIQEESADMACRSVRHNRLEEQIDIVTGDIKEASQIFGKGSMDVITTNPPYMIG 129

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKV 233
              +        +   +   +L            I    +R L   G   +    +    
Sbjct: 130 GHGMANPESAKAIARHEVLCTL----------EDIIRESARILKAGGRFYMVHRPFRLAE 179

Query: 234 DVVRIFESR 242
            +  + E++
Sbjct: 180 ILTAMCEAK 188


>gi|52081093|ref|YP_079884.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|52786472|ref|YP_092301.1| ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|319644949|ref|ZP_07999182.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2]
 gi|81825250|sp|Q65H56|PRMA_BACLD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52004304|gb|AAU24246.1| Ribosomal protein L11 methyltransferase [Bacillus licheniformis
           ATCC 14580]
 gi|52348974|gb|AAU41608.1| YqeT [Bacillus licheniformis ATCC 14580]
 gi|317392758|gb|EFV73552.1| ribosomal protein L11 methyltransferase [Bacillus sp. BT1B_CT2]
          Length = 311

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 71/218 (32%), Gaps = 52/218 (23%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      + T+      + P    EL+++              + L       
Sbjct: 112 TAWKKYYHPVKISEKFTIVPTWEEYTPVHTDELIIEMDPGMAFGTGTHPTTVLCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++   ++D+GTGTG + +A        +  G D+   A+E A+ N+  N VS+  +  
Sbjct: 172 YVKEGDSVVDVGTGTGILSIASAMLRAK-QVEGYDLDPVAVESARLNSKLNKVSDHIEIK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    VEG  D+IV+N                      ++               D  
Sbjct: 231 QNNLLDGVEGEKDIIVAN---------------------ILA--------EVILRFTDQA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
              L   G      I   +K +V          +V   
Sbjct: 262 YSLLKDGGYFITSGIIQQKKQEVKDALVKEGFTIVEVL 299


>gi|254567916|ref|XP_002491068.1| S-adenosylmethionine-dependent methyltransferase of the seven
           beta-strand family [Pichia pastoris GS115]
 gi|238030865|emb|CAY68788.1| S-adenosylmethionine-dependent methyltransferase of the seven
           beta-strand family [Pichia pastoris GS115]
          Length = 225

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 81/201 (40%), Gaps = 23/201 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKES-PFFK 123
              +EP  ++ LL+D       P +E      DV  ++++GTG+G V   + +   P   
Sbjct: 13  EKVYEPAEDSFLLLD-VFEKEKPWLESYKWNSDVPLVVEIGTGSGVVTTFVNQHIIPQGL 71

Query: 124 GVGVDISCKALEIA----KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
            +  D++           K N    G       LQ D  + +     DV++ NPPY+ S 
Sbjct: 72  FLATDLNPHCCNAVLGTHKRNI---GKKGNLQVLQCDLTTPLRRNQVDVLIFNPPYVPSE 128

Query: 179 IVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDV 235
            V  +  +  D +  +  +L GG  G+     + D +   L+++G+  +     N    V
Sbjct: 129 TVPEVARD-PDSEDWLDIALLGGPTGMDITEKVLDSLYDTLSRNGVAYILFCARNHPERV 187

Query: 236 VRIFESR-----KLFLVNAFK 251
           +  F+++       + +   +
Sbjct: 188 MENFKAKETQRGNGWEIECVQ 208


>gi|224541620|ref|ZP_03682159.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525458|gb|EEF94563.1| hypothetical protein CATMIT_00791 [Catenibacterium mitsuokai DSM
           15897]
          Length = 243

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 27/209 (12%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +E I+ +LG   + ++++    D F    +T LL +            +D+  I+D GT 
Sbjct: 2   NEEINHLLG---YNDMKIIQRRDMFTFSLDTVLLANFCAIT-------KDMKTIVDFGTN 51

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLF 165
             A+ L +L +    K +GV+I  +A+EIA+ N   N V ++ + +  D    V+     
Sbjct: 52  NAAIPL-ILTQRTHKKIIGVEIQKEAVEIAERNVKLNHVEDQVEIIHDDIKEYVKYAPRT 110

Query: 166 DVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             IV NPP+ +      +       +   + +I L+G          I    ++ L+++G
Sbjct: 111 KAIVCNPPFFKLGEKSHINESPYMTIARHEIKIDLEG----------IIASAAKILDQNG 160

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             S+    ++ ++ + +F+  ++      
Sbjct: 161 RFSMVYRPDRFIETIELFKKYRIEPKRIR 189


>gi|262037227|ref|ZP_06010710.1| methyltransferase small [Leptotrichia goodfellowii F0264]
 gi|261748747|gb|EEY36103.1| methyltransferase small [Leptotrichia goodfellowii F0264]
          Length = 201

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 35/198 (17%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           + E I   +  ++   +     +  F  + + +   D  L   +   +      +LD+G 
Sbjct: 14  QREKIKYTIENKE---MEFITDNGVFS-KSKIDFGTDLMLKTFIKNFKTEKGFDVLDIGC 69

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G V + L    P       D++ +ALE+++ N   + +++ +  ++S  F ++   +D
Sbjct: 70  GYGIVSVVLKTFYPLSSVTLSDVNERALELSEENLKNHNIND-YKIVKSFAFDNISDKYD 128

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +I+SNPP                            G      I +G   HLN  G     
Sbjct: 129 IIMSNPPIRA-------------------------GKETIFKIYEGAYEHLNNKGEFYCV 163

Query: 227 IGYNQKV-----DVVRIF 239
           I            +  IF
Sbjct: 164 IQTKHGAKSTQKKLEEIF 181


>gi|270263855|ref|ZP_06192123.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
 gi|270042048|gb|EFA15144.1| hypothetical protein SOD_f00690 [Serratia odorifera 4Rx13]
          Length = 347

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 31/170 (18%)

Query: 57  WRD---FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W +    +++ +      F  R      +D   +  L  +EK    ++LDLG G G +  
Sbjct: 158 WWESYPLHDLEVKTLPGVFS-RDG----LDVGSSLLLSTLEKHMKGKVLDLGCGAGVMAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K SP  K    D++  A+E +++    NG+    + + S+ +S + G FD+I+SNPP
Sbjct: 213 VLSKLSPKVKLTLSDVNAAAVESSRATLAANGIEG--EVIVSNVYSDITGRFDMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+   T+  G  +HL   G  
Sbjct: 271 FH---------------------DGLQTSLTAAETLIRGALKHLPIGGRL 299


>gi|255718593|ref|XP_002555577.1| KLTH0G12518p [Lachancea thermotolerans]
 gi|238936961|emb|CAR25140.1| KLTH0G12518p [Lachancea thermotolerans]
          Length = 220

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 80/189 (42%), Gaps = 17/189 (8%)

Query: 71  TFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKE---SPFFKGV 125
            +EP  ++ L++D+       L    +     + ++G G+G V   +++    +     +
Sbjct: 14  VYEPSEDSFLILDALEKEQAFLRTYFRSKPTVVCEVGCGSGIVTTFMMQNDIPNEHAIYL 73

Query: 126 GVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
             D++  A    +E A  N   N  ++    ++++  SS+     D +V NPPY+ +  V
Sbjct: 74  PTDVNPWAMDSMVESASLN---NCCTKMLSPIRTNLTSSIRPREIDFLVFNPPYVPAESV 130

Query: 181 DCLGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVV 236
             + L+    +     ++L GG DG++    + D + + +   G+  +     N    VV
Sbjct: 131 PYMPLDSEANEGDWLDLALLGGDDGMAITWKLLDSLDKIMAPGGIAYILFCARNHPEKVV 190

Query: 237 RIFESRKLF 245
           +   +R   
Sbjct: 191 KTMSTRGWK 199


>gi|226366208|ref|YP_002783991.1| hypothetical protein ROP_67990 [Rhodococcus opacus B4]
 gi|226244698|dbj|BAH55046.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 493

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 72/194 (37%), Gaps = 26/194 (13%)

Query: 70  DTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            +  PR    +  + V  A    L       V  +LD+GTG G   L     +       
Sbjct: 124 GSLRPRETPVDHVIGVGHASLSLLRATPTAPVGTLLDIGTGCGIQALHGASYAH--SITA 181

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            D++ +A+++A   A  N   +  + L   WF  VEG  FD IV+NPP++  V    +G 
Sbjct: 182 TDLNVRAVDLAAVTAALN--EQEVELLAGSWFEPVEGRTFDQIVANPPFV--VSRATVGH 237

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-------LCSVEIGYNQKVDVVRI 238
             R        D G+D       +   V+ +L   G          VE G + +  V   
Sbjct: 238 TYR--------DSGLDLDGASELMISRVAGYLAPGGTAALLASWIHVE-GEDWRARVASW 288

Query: 239 FESRKLFLVNAFKD 252
             +  +      +D
Sbjct: 289 LPAHGIDAWVVQRD 302


>gi|224584496|ref|YP_002638294.1| transferase [Salmonella enterica subsp. enterica serovar Paratyphi
           C strain RKS4594]
 gi|224469023|gb|ACN46853.1| putative transferase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|326624412|gb|EGE30757.1| Methyltransferase domain containing protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
          Length = 219

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 13  WAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 73  TVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARY--TATLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + +DG   V +         +   +    L     D   N+     RVLL
Sbjct: 123 QTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|229917367|ref|YP_002886013.1| methyltransferase small [Exiguobacterium sp. AT1b]
 gi|229468796|gb|ACQ70568.1| methyltransferase small [Exiguobacterium sp. AT1b]
          Length = 198

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 70/201 (34%), Gaps = 47/201 (23%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
            T     F         VD      +   E  DV  RILD+G G G + ++L   S   +
Sbjct: 30  FTSDRGVFSKGS-----VDFGSRLLIETFEMPDVSGRILDVGCGYGPMGISLADAS-GRE 83

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDC 182
            + +D++ +AL +++ NA  NGV+   +T  S  + +V G  F  IV+NPP         
Sbjct: 84  ALLIDVNERALALSEQNAARNGVT--VETRLSHAYDAVGGERFAAIVTNPPIRA------ 135

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--------- 233
                              G     TI      HL   G   V I   Q           
Sbjct: 136 -------------------GKQVVHTILREAHTHLVDGGAIYVVIQKKQGAPSAKKLLEE 176

Query: 234 ---DVVRIFESRKLFLVNAFK 251
               V  I + +  F+  A +
Sbjct: 177 VFGQVETIAKEKGYFIFRAIR 197


>gi|312793762|ref|YP_004026685.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180902|gb|ADQ41072.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 304

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 39/172 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL     +   +  + +LD+GTG+G + +A  K+    + + VDI   A+++A+ NA  
Sbjct: 155 TALCLEAIQEYVKPGMDVLDVGTGSGILAIA-AKKFLAKRVLAVDIDEVAVKVAEENARL 213

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NGV    +  ++D    +E  FDV+++N                      ++        
Sbjct: 214 NGVE--IEIKKNDLVEGIEEKFDVVIAN---------------------IVA-------- 242

Query: 204 SHYRTIADGVSRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                ++  ++R L +DG+      +E   ++  DV++ FE   L +V   K
Sbjct: 243 DIIIKLSKDINRVLKEDGIFISSGIIE---DRLEDVLKSFEKNSLEIVEVKK 291


>gi|239623106|ref|ZP_04666137.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47_FAA]
 gi|239522473|gb|EEQ62339.1| methyltransferase type 11 [Clostridiales bacterium 1_7_47FAA]
          Length = 253

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++K +  R+LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 40  MDAVLLSGFAVVKKGE--RMLDLGTGTGIIPILLTAKTEGEHFTGLEIQEESADMARRSV 97

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             N + E+ D +  D   + +      FDV+ SNPPY+          + +     + + 
Sbjct: 98  RYNHLEEKVDIVTGDIVEASQLFALASFDVVTSNPPYMNDAHGLKNPGDAKAIARHEVKC 157

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L            +    +R L   G   +     + +++++  +   L
Sbjct: 158 TL----------EDVVREGTRVLKPGGRFYMVHRPRRLIEIIQTMKKHGL 197


>gi|118777359|ref|XP_307877.2| AGAP009458-PA [Anopheles gambiae str. PEST]
 gi|116132913|gb|EAA03648.2| AGAP009458-PA [Anopheles gambiae str. PEST]
          Length = 230

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 22/173 (12%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP--FFKGVGVD 128
            +EP  +T L +  AL   L  I+ R     +++G G+G V +AL K  P      +G D
Sbjct: 16  VYEPAEDTFL-LLDALEAELDTIKARQPSLCVEIGPGSGVVIVALSKHLPAGQTHCIGFD 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           ++  A  + +  A  NG   R D +  D  + +     D++V NPPY+ +          
Sbjct: 75  LNPNACRMTQKTAHLNG--SRVDVVNMDLLAGLRPTSVDLLVFNPPYVPT-QPATTAHAA 131

Query: 188 RDFDPRI---------------SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  I               +  GG DG      +   + R L+  GL  +
Sbjct: 132 ASLEEHIDEFRSSVDVGQTLVHAWAGGADGRVVTDRVLADLPRVLSPTGLFYL 184


>gi|210623863|ref|ZP_03294098.1| hypothetical protein CLOHIR_02049 [Clostridium hiranonis DSM 13275]
 gi|210153289|gb|EEA84295.1| hypothetical protein CLOHIR_02049 [Clostridium hiranonis DSM 13275]
          Length = 320

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 31/193 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEKR-------------- 96
           W+ +Y           +P  E         +++     +                     
Sbjct: 122 WKKYYKPTKVGEKIVIKPSWEEYEEQDGDIVIELDPGMAFGTGTHETTSMCICQLEKYVT 181

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++ D+G G+G + +A  K         VD+   A+E+AK N   + V ++   L  +
Sbjct: 182 PDAKVFDIGCGSGILAIAAAKLGAN-DVTAVDLDEVAVEVAKENVKESNVEDKVTVLHGN 240

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVS 214
               +    DV+V+N   I + I+  L  +V+ F  +  + +  G           D V 
Sbjct: 241 LTDVIHDKADVVVAN---IIADIIKILAKDVQQFMKEDAVFISSG-----IILAKIDEVV 292

Query: 215 RHLNKDGLCSVEI 227
             L ++G   VE+
Sbjct: 293 ESLEENGFEIVEV 305


>gi|116515142|ref|YP_802771.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285462|sp|Q057M1|RSMC_BUCCC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|116256996|gb|ABJ90678.1| 16S RNA m2G1207 methylase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 343

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+     +    K+   +ILD+G+GTG + +AL K++P  K    DI   A+  +K+N 
Sbjct: 188 IDTGSKLLISTFNKKINGKILDIGSGTGILSIALAKKNPLIKITLTDIYDAAIWCSKNNL 247

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           + N +  +   L SD +S ++  +D+I+SNPP
Sbjct: 248 IKNNLIGKV--LFSDIYSHIKKRYDLIISNPP 277


>gi|329905043|ref|ZP_08273978.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547779|gb|EGF32552.1| methylase of polypeptide chain release factor [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 379

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 27/197 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV          +         D+GTGTG +  A+L +  
Sbjct: 167 GNRIHPHYGVFAPVRGEYVGLV--------AEMPLPSTTLAFDIGTGTGVLA-AVLAQRG 217

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +  D   +AL  A+ N    G+    + L +D F    G   +IV NPP++ +   
Sbjct: 218 VRRVIATDQDPRALTCAQENITRLGMDATIELLCADLFPP--GRAGLIVCNPPWLPARPS 275

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EI-GYNQKVDV 235
             +   + D + R+ L G +DGL+ +    +         G   +    E  G   + ++
Sbjct: 276 SPIEYAMYDPESRM-LRGFLDGLAAH---LEEAGE-----GWLILSDLAEHLGLRTRAEL 326

Query: 236 VRIFESRKLFLVNAFKD 252
           +    +  L  V   KD
Sbjct: 327 LEWISTAGLK-VLGRKD 342


>gi|300770016|ref|ZP_07079895.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762492|gb|EFK59309.1| methyltransferase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 236

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 17/163 (10%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+GTGTG + L L +         V+I   A + AK N + +  SER    Q  
Sbjct: 36  PAAHILDIGTGTGVIALMLAQRFENAILEAVEIDALAADRAKQNFLNSPFSERMYA-QHV 94

Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            F  +     +D+I+SNPP+           + R    + +       L  +  + D   
Sbjct: 95  SFEDLHPVSKYDLIISNPPFYTDS---LHNPDNRK---KTARHAD---LPFFERLFDFAG 145

Query: 215 RHLNKDGLCSVEI-----GYNQKVDVVRIFESRKLFLVNAFKD 252
           RHL ++GL  + +     G  Q +   +   +  +  V ++KD
Sbjct: 146 RHLMEEGLLRLILPPELAGQLQDIATTQELIAEHVIAVQSYKD 188


>gi|153815173|ref|ZP_01967841.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756]
 gi|317502368|ref|ZP_07960534.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089969|ref|ZP_08338860.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847432|gb|EDK24350.1| hypothetical protein RUMTOR_01405 [Ruminococcus torques ATCC 27756]
 gi|316896241|gb|EFV18346.1| SAM-dependent methyltransferase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330403107|gb|EGG82670.1| hypothetical protein HMPREF1025_02443 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 237

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 28/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L      F    +   L D          + +   R LDLGTG G + + L +++  
Sbjct: 25  GLELIQDPKKFCFGVDAVFLSDFV--------KIKAGERALDLGTGNGIIPILLSEKTQG 76

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I  +  E+A+ +   NG+ ++ D +  D   + E      FDVI +NPPY+ +
Sbjct: 77  RHFTGLEIQPEMAEMARRSVDYNGLEDKVDIVTGDIKEAAEIFKPAFFDVITTNPPYMIA 136

Query: 178 VIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   + +     +   SLD           I     R L   G   +     +   
Sbjct: 137 DHGLRNPADAKAIARHEVLCSLD----------DILRESMRLLQDKGRFYMIH---RPFR 183

Query: 235 VVRIFESRKLFLVN 248
           +  I      + + 
Sbjct: 184 LTEIMIKMNYYKIE 197


>gi|322515350|ref|ZP_08068346.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
           25976]
 gi|322118637|gb|EFX90859.1| rRNA (guanine-N(2)-)-methyltransferase [Actinobacillus ureae ATCC
           25976]
          Length = 329

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +ILDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KILDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENALEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +E  FD+IVSNPP+ + +                              +       LN+
Sbjct: 250 HIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKNRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|288554716|ref|YP_003426651.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4]
 gi|288545876|gb|ADC49759.1| ribosomal RNA methyltransferase [Bacillus pseudofirmus OF4]
          Length = 201

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/204 (23%), Positives = 78/204 (38%), Gaps = 49/204 (24%)

Query: 64  RLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R T     F   E    + LL+D   AF++P +       +LD+G G G + LA+     
Sbjct: 29  RFTSDRGVFSKNEVDFGSRLLID---AFTMPEVSGA----LLDVGCGYGPIGLAVASIDK 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVI 179
             +   VD++ +AL++A+ NA+ NG+S   D  +SD    V+G  +  I++NPP      
Sbjct: 82  EREVHMVDVNVRALDLARKNAMNNGIS-NVDIYESDTLGQVKGDQYAAILTNPPIRA--- 137

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VD 234
                                 G      I +     L   G   V I   Q        
Sbjct: 138 ----------------------GKKVVHEIFEQAHGRLKNGGCLWVVIQKKQGAPSAMEK 175

Query: 235 VVRIF-------ESRKLFLVNAFK 251
           +  +F       + +  F+++A K
Sbjct: 176 IEGLFGNVEVVEKKKGYFILSAKK 199


>gi|300361859|ref|ZP_07058036.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           JV-V03]
 gi|300354478|gb|EFJ70349.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           JV-V03]
          Length = 315

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +    + +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDVGTGSGILAIA-ASKLGASQVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N + +  D  +++    ++  +D+IV+N                      ++  
Sbjct: 217 KENIALNNI-DNIDVRKANLLKDIDEKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLN++G      I Y Q   + +        +
Sbjct: 253 ------DILLELIPDLDSHLNENGKVIFSGIDYLQLPKIEKALAENNFEI 296


>gi|253988778|ref|YP_003040134.1| hypothetical protein PAU_01297 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780228|emb|CAQ83389.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 244

 Score = 82.5 bits (203), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 25/183 (13%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                D   ILD+G G+G + L L + +    K   V++   A   A+ N   +    + 
Sbjct: 38  WASVSDKKAILDIGCGSGLIALMLAQRTDKNTKIDAVELDINAAFQAQENVEQSPWRRKV 97

Query: 151 DTLQ---SDWFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +      +D+       +D+IVSNPPY   ++       E   +           G   +
Sbjct: 98  NVYHQDINDFADRYSQCYDLIVSNPPYFEPAIACRNEAREQARY----------TGSLTH 147

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-----LVNAFKDYGGND--RV 259
           + +     + +  DGL  V + Y        +   R  F      +   K   G    R+
Sbjct: 148 QRLLQDAEKLITPDGLFCVVLPYAIGEVFETMACQRGWFSHDRVNIRDRK---GKPLHRM 204

Query: 260 LLF 262
           LL 
Sbjct: 205 LLA 207


>gi|281201671|gb|EFA75879.1| hypothetical protein PPL_10451 [Polysphondylium pallidum PN500]
          Length = 324

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 36/220 (16%)

Query: 42  IVRS-------LKHES-IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI 93
           I R        L +E  +   LG +D+ N         +EP  ++ L +D AL   +  +
Sbjct: 103 IRRRMSGNSNDLPNEPNMSH-LGSKDYQN--------VYEPAQDSFLFID-ALKKDVEYL 152

Query: 94  EKRDVVRILDLGTGTG-AVC-LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +    +  +++G+G+G  +  L++L  +     +  DI+  A   +   A  N V  R D
Sbjct: 153 KGLRPLVAVEIGSGSGFVISYLSMLLNN-DGYFLSTDINPIAAMTSTRTATHNNV--RLD 209

Query: 152 TLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + + + S ++   G  DV++ NPPY+ +   +     +       S  GGIDG      
Sbjct: 210 VVNTSFLSGIDRLLGNVDVLLFNPPYVPTPSEEIEQGGI-----AASWAGGIDGREVIDK 264

Query: 209 IADGVSRHLNKDG---LCSVEIGYNQKVDVVRIFESRKLF 245
           +   +S  L++ G   +  VE   N+  +VV I +     
Sbjct: 265 LLPQISNILSEKGCFYIVLVE--ENKPAEVVAIMKKYNFK 302


>gi|323490605|ref|ZP_08095810.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2]
 gi|323395697|gb|EGA88538.1| hypothetical protein GPDM_14642 [Planococcus donghaensis MPA1U2]
          Length = 200

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 73/204 (35%), Gaps = 49/204 (24%)

Query: 64  RLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R    +  F        + LL+++    ++          +LD+G G G + + + K SP
Sbjct: 29  RFQTDAGVFSKSEVDFGSRLLIETFQNSAIDGP-------VLDVGCGYGPIGMTVAKISP 81

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             +   VD++ +A+E+AK+NA  N +S      +SD  S+VE   F  I++NPP      
Sbjct: 82  QKQVHMVDVNTRAIELAKTNAEKNDIS-NVRIYESDGLSTVEASGFSAILTNPPIRA--- 137

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----D 234
                                 G        +  +  L   G   V I   Q        
Sbjct: 138 ----------------------GKETIFRFYEEAAEKLADGGSLWVVIQKKQGAPSTQVK 175

Query: 235 VVRIF-------ESRKLFLVNAFK 251
           +  +F       + +  F+  A K
Sbjct: 176 LEELFGEVKVVDKKKGYFIFEARK 199


>gi|332654231|ref|ZP_08419975.1| putative methyltransferase [Ruminococcaceae bacterium D16]
 gi|332517317|gb|EGJ46922.1| putative methyltransferase [Ruminococcaceae bacterium D16]
          Length = 208

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 61/177 (34%), Gaps = 21/177 (11%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L    + F    +T  L   A          R   R+ DLGTG+G + L L       +
Sbjct: 11  QLEQRPEVFPLGSDTLALGRFA--------TVRKGWRVCDLGTGSGVLLLLLAARESQLE 62

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
             G+D    A  +A+ N   N +  +  T          G FD++VSNPPY         
Sbjct: 63  LFGLDQDPAAAALAQDNLRHNDLEGQIWTGSWSQTPFPPGSFDLVVSNPPYYAPGSGKDG 122

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           G    + +   +L                 +R L   G  ++     + VD++    
Sbjct: 123 GPARMEREELDAL-------------CRAAARLLRNGGRFALSFPTQRMVDLLEAMR 166


>gi|302384472|ref|YP_003820294.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
 gi|302195100|gb|ADL02671.1| Methyltransferase type 11 [Clostridium saccharolyticum WM1]
          Length = 245

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 25/190 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++  + D F    +  LL   AL         +   + +DLGTGTG + L L  ++  
Sbjct: 18  GYKIIQNRDGFCFGMDAVLLSGFALV--------KPGEKAVDLGTGTGIIPLLLEAKNQG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I     E+A+ +   N + E+   +  D   +        FDV+ SNPPY+  
Sbjct: 70  IHYTGLEIQEAMAEMARRSVALNHLEEKITIVTGDIKEASRLFGAASFDVVTSNPPYMND 129

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   L   +   +   SL          R      +R L   G   +    ++ V+
Sbjct: 130 SHGLKNPDLPKAIARHEVLCSL------SDVTR----EAARLLRPGGRFYMVHRPHRLVE 179

Query: 235 VVRIFESRKL 244
           ++   +  +L
Sbjct: 180 IITALKDCRL 189


>gi|317125286|ref|YP_004099398.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM
           43043]
 gi|315589374|gb|ADU48671.1| 16S rRNA m(2)G 1207 methyltransferase [Intrasporangium calvum DSM
           43043]
          Length = 204

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 18/143 (12%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            ++ LT +   + P    P T +L+  A        +      +LDLG G G + L L +
Sbjct: 29  RDLTLTTARGVYSPDRLDPGTAVLLAGA-------PDPSPTGHLLDLGCGWGPISLTLAR 81

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
            SP  +  GVD++ +AL++A  NA   GV +     +    + V G   FD I SNPP  
Sbjct: 82  RSPAARVWGVDVNRRALQLAALNAEAAGV-DNVTFCEP---ADVPGDLRFDTIWSNPPI- 136

Query: 176 ESVIVDCLGLEVRDFDPRISLDG 198
             V    L   +  + PR++ +G
Sbjct: 137 -HVGKSALHALLERWLPRLAPEG 158


>gi|23014220|ref|ZP_00054048.1| COG4123: Predicted O-methyltransferase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 250

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 73/209 (34%), Gaps = 15/209 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L       +PR      +D         +  R   RILDLG G GA  L LL   P 
Sbjct: 10  DLLLNGRVRLLQPRYGYRAAIDPVF--LAAAVPARPGERILDLGCGVGAAALCLLARCPD 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
               G++I      +A+ NAV N     F     D      GL  F  +++NPP+ ES  
Sbjct: 68  VVVEGLEIQGPLAGLARRNAVLNEAERGFAVHAGDAARPPAGLGGFHHVMTNPPFFESGS 127

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                   R  D   ++     GL           + L   G   +     +  D++   
Sbjct: 128 GT------RAADASRAMAHEEGGLDLA-GWIKAAVKLLRPKGRLILIHRAERLGDILAGL 180

Query: 240 ESRKLFLVNAF----KDYGGNDRVLLFCR 264
             R +  V       K+  G  RV++  R
Sbjct: 181 RGRGVGDVAVLPLWPKNGRGAGRVIVSAR 209


>gi|259907667|ref|YP_002648023.1| Putative enzyme [Erwinia pyrifoliae Ep1/96]
 gi|224963289|emb|CAX54774.1| Putative enzyme [Erwinia pyrifoliae Ep1/96]
          Length = 256

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +V R LD+G+G+G + L L + +        V++   A   A+ N   +   ++ 
Sbjct: 50  WAPVANVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKV 109

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D   W    E  + +IVSNPPY                +   ++          +
Sbjct: 110 RVQQADIVEWTQRCEHRYSLIVSNPPYFSPGSQCASPQRTAARYTTDLT----------H 159

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +       +++DG   V +       +V     R   L     D   ND     RVLL
Sbjct: 160 EVLLGCAEELIDEDGFFCVILPEPAGNKLVEQALQRGWHL-RFRTDVADNDTRPPNRVLL 218

Query: 262 F 262
            
Sbjct: 219 A 219


>gi|154250324|ref|YP_001411149.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1]
 gi|154154260|gb|ABS61492.1| ribosomal L11 methyltransferase [Fervidobacterium nodosum Rt17-B1]
          Length = 247

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 32/130 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + +LDLG G+G + + L K+    + + VD    A+E+A  NA  N V    +   S
Sbjct: 118 KPGMDVLDLGCGSGILGI-LAKKLGANRVLAVDNDPLAVEVAMENAERNKVD--IEVRLS 174

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D FS+V+G FD+IVSN   I  ++V+ L                                
Sbjct: 175 DLFSNVDGKFDIIVSN--IIAEILVEML---------------------------KNAGN 205

Query: 216 HLNKDGLCSV 225
           +L + G+  +
Sbjct: 206 YLKEGGILIL 215


>gi|313245968|emb|CBY34942.1| unnamed protein product [Oikopleura dioica]
          Length = 394

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 18/158 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +         + + +DI  + +E+AK NA   GV +R + +  D+F  
Sbjct: 194 IVDGFCGVGGNAIQFA--FTCERVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKI 251

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADG 212
           +     DV+  +PP+     +D    +++D        GG+DGL  YR        IA  
Sbjct: 252 IPSLRPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYF 304

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           V R+       +   G +Q+V+V +   + K   + A+
Sbjct: 305 VPRN-TDSAQLAWLAGEDQQVEVEQNMLNYKTKTITAY 341


>gi|313224250|emb|CBY20039.1| unnamed protein product [Oikopleura dioica]
          Length = 427

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 18/158 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +         + + +DI  + +E+AK NA   GV +R + +  D+F  
Sbjct: 227 IVDGFCGVGGNAIQFA--FTCERVIAIDIDPEKIEMAKHNAAIYGVEDRIEFIVGDYFKI 284

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-------TIADG 212
           +     DV+  +PP+     +D    +++D        GG+DGL  YR        IA  
Sbjct: 285 IPSLRPDVVFLSPPWGGPAYLDQDIFDLKDM-------GGMDGLEIYRVAKERTDNIAYF 337

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           V R+       +   G +Q+V+V +   + K   + A+
Sbjct: 338 VPRN-TDSAQLAWLAGEDQQVEVEQNMLNYKTKTITAY 374


>gi|238759675|ref|ZP_04620835.1| Methyltransferase small [Yersinia aldovae ATCC 35236]
 gi|238702103|gb|EEP94660.1| Methyltransferase small [Yersinia aldovae ATCC 35236]
          Length = 219

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +   +  R+LD+G G+G + L + + S       GV++   A + A SNA ++  + R 
Sbjct: 13  WVPVDNSRRVLDIGCGSGLIALMIAQRSASDVLIDGVELEPAAAQQAISNAESSPWAARV 72

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 73  HIYEQDVHQFAENHPQQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHL 123

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF---LVNAFKDYGGND--RVLL 261
            + +   + +  DG+  V + +   +++ R+      +    VN  +D  G    R+LL
Sbjct: 124 ALLNCAEKLITDDGMFCVVLPHELGIELARLGGQMGWYVRGQVNV-RDRPGKPLHRMLL 181


>gi|332830369|gb|EGK02997.1| hypothetical protein HMPREF9455_01247 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 236

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 15/151 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            I   +  + LD+GTGTG V L L +         +DI   A+E AK N   +  S++  
Sbjct: 32  WINVSEAEKALDIGTGTGLVALMLAQRKDKLHIDAIDIDHYAIEQAKENIKQSPFSDQIQ 91

Query: 152 TLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR--ISLDGGIDGLSHYR 207
             +S    F      +D+IVSNPP+    +            P    +L    D LS   
Sbjct: 92  AFESSLQHFRESRQQYDLIVSNPPFFIQSLKS----------PHKERTLARHTDSLS-LE 140

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
            + +  +  L   G  S+      K  +  +
Sbjct: 141 ELLEISAVLLTSKGKLSIIYPSEHKETLFSL 171


>gi|207110170|ref|ZP_03244332.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 111

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 29/85 (34%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
            +S   L  V       +       L+  +       + + L    I  +L   DFY   
Sbjct: 23  LESEILLGFVLQKERVFLHTHAYLELNHEEEMRFFELVEKRLNDCPIEYLLESCDFYGRS 82

Query: 65  LTLSSDTFEPRPETELLVDSALAFS 89
             ++     PRPETE+LV   L   
Sbjct: 83  FFVNEHVLIPRPETEILVQKTLDII 107


>gi|289706188|ref|ZP_06502552.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289557100|gb|EFD50427.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 528

 Score = 82.1 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L V  A        ++R V R LD+G G G   L LL  +        D+S +AL 
Sbjct: 164 PEHVLGVGRASLTLAGATQRRPVARALDVGVGCGIQTLHLLAHAD--HVTATDLSERALA 221

Query: 136 IAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
             + N + N          + +R      D  + V G  FD++VSNPP++ +   D    
Sbjct: 222 FTRFNLLLNADVLGLDRERLEDRVRLAAGDLLAPVAGERFDLVVSNPPFVITPRTDPDAP 281

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  +      DGG +G      +   +   L + G   +
Sbjct: 282 -VLTY-----RDGGREGDRIVAELIAALPDVLAEGGTAQL 315


>gi|260219477|emb|CBA26322.1| hypothetical protein Csp_E34100 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 423

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 21/167 (12%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-----DLGTGTGAVCLALLKESP 120
            +        P     VD   A  LP    +DV   L     D+GTG+G +  A+L    
Sbjct: 203 RIHPHYGVFSPVRGEYVDLVAAAPLPAQSGKDVRDALPFVAFDIGTGSGVLS-AVLARRQ 261

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D   +A+  A  N    GV+   D  Q+D F +  G  +++V NPP++ +   
Sbjct: 262 DMHIVATDQDARAMACATENFARLGVTAGIDLQQTDMFPA--GRANLVVCNPPWLPARPS 319

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
             +   V D + R+ L               G+  HL +   G   +
Sbjct: 320 APVEYAVYDENSRMLL-----------AFLAGLPAHLLEGGEGWLII 355


>gi|297543642|ref|YP_003675944.1| methyltransferase small [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841417|gb|ADH59933.1| methyltransferase small [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 248

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 21/152 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +    +K D  +I+DLG GTG + + +  ++      GV+I     ++A  + 
Sbjct: 29  MDAVLLANFVTAKKGD--KIVDLGCGTGIIPILIAAKTYDTFIYGVEIQEDMADMATRSV 86

Query: 142 VTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIE---SVIVDCLGLEVRDFDPR 193
           V N + +R   +Q D    +E       FD++ SNPPY+              +  ++  
Sbjct: 87  VINNMEKRIKIIQGDV-RGIEKTLGYEKFDIVTSNPPYMPVKAGFDKKRKSENIARYE-- 143

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             + GG              S+ L   G   +
Sbjct: 144 --IYGG------LEEFIKAASKLLKFGGKFFM 167


>gi|320010002|gb|ADW04852.1| methyltransferase small [Streptomyces flavogriseus ATCC 33331]
          Length = 528

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++ V   LDLGTG+G   L     +   +    D++ +ALE  +     +G +   D  +
Sbjct: 184 RKPVTSALDLGTGSGIQALHAASHAG--RVTATDVNPRALEFTRLTLALSGAAP-ADLRE 240

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP++ S                   DGG+ G    RT+    
Sbjct: 241 GSLFDPVGAETFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQA 289

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
             HL + G       +    
Sbjct: 290 GEHLAEGGYAQFLANWQHVE 309


>gi|225621207|ref|YP_002722465.1| methyltransferase small domain-containing protein [Brachyspira
           hyodysenteriae WA1]
 gi|225216027|gb|ACN84761.1| methyltransferase small domain protein [Brachyspira hyodysenteriae
           WA1]
          Length = 213

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 9/138 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++ T +   F P+      +D      +  I   D  +ILDLG G G V +   K    
Sbjct: 12  DLKFTSNDKLFSPKN-----IDIGTLSMINEINFEDENKILDLGCGYGVVGILAAKIIGE 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIV 180
            K V  DI  +A+EI+K NAV N VS   + +QSD   + ++  F +I+SNPPY     V
Sbjct: 67  DKVVMCDIDAEAVEISKHNAVLNNVS-NINIIQSDGLRNIIDNDFSMILSNPPYHTDFSV 125

Query: 181 DCLGLEVRDFDPRISLDG 198
               +E   +  +++L+G
Sbjct: 126 AKHFIESGFY--KLALNG 141


>gi|134100707|ref|YP_001106368.1| methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|291006488|ref|ZP_06564461.1| methyltransferase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913330|emb|CAM03443.1| methyltransferase [Saccharopolyspora erythraea NRRL 2338]
          Length = 218

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +T LL +      L R       R+LD+GTGT          +     V VD
Sbjct: 7   PGVYRPQGDTYLLAEVLGESGLRR-----GSRVLDVGTGT-GALAVAAVRAGAGSVVAVD 60

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  A+  A  N +  G+  R      D      +  FD +VSNPPY+ S        EV
Sbjct: 61  VSVPAVVSASINTLLRGMPVRVA--HGDALERFGDERFDAVVSNPPYVPSA-----AEEV 113

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFESRK 243
                  + + G  G +    +       L   G+  V       VD  +R    R 
Sbjct: 114 PSRGASRAWEAGRGGRALLDRLCALAPDLLRPGGILLVVHSDLSGVDSTLRQLRHRG 170


>gi|86147399|ref|ZP_01065712.1| hypothetical protein MED222_01052 [Vibrio sp. MED222]
 gi|85834827|gb|EAQ52972.1| hypothetical protein MED222_01052 [Vibrio sp. MED222]
          Length = 242

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 10/159 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I       +LD+GTGTG + L   +         +DI   A++ A  N   +   +R 
Sbjct: 36  SWINLAPESLVLDIGTGTGLLALMAAQRFEDASISAIDIDQHAIDAATVNIEQSPWQDRI 95

Query: 151 DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                    +     FD I+ NPPY  S                 +     D L H   +
Sbjct: 96  SLHHDSVLTTDFSQQFDAIICNPPYFNSGEQAQQSQ--------RATARHTDSLDHL-QL 146

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           A             S  +   +    +++ E    +L  
Sbjct: 147 AQCCFEITTDAATASFILPTPEGEGFIKLAEQCGWYLAK 185


>gi|120609940|ref|YP_969618.1| methyltransferase small [Acidovorax citrulli AAC00-1]
 gi|120588404|gb|ABM31844.1| methyltransferase small [Acidovorax citrulli AAC00-1]
          Length = 388

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 23/165 (13%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           R+      F P R E   LV      +             D+GTGTG +  A+L      
Sbjct: 181 RIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALA------FDIGTGTGVLA-AVLARRGVR 233

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  D   +AL  A+ N     V    D LQ+D F    G   ++V NPP++ +     
Sbjct: 234 RVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP--GRAPLVVCNPPWVPARAAAP 291

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
           +   V D            G+   R    G++ HL     G   +
Sbjct: 292 VERAVYD---------EDSGM--LRGFLGGLAEHLEPGGEGWLIL 325


>gi|260578867|ref|ZP_05846773.1| transferase [Corynebacterium jeikeium ATCC 43734]
 gi|258603014|gb|EEW16285.1| transferase [Corynebacterium jeikeium ATCC 43734]
          Length = 469

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 20/177 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL--KESPFFKGVGVDI 129
            P P     V +A    L  I +     R+LDLGTG+G + L L    E    K  G DI
Sbjct: 58  VPGPGHVPGVGNAPLSLLNAIPQLPANARVLDLGTGSGVLALVLAANAEVEPPKIFGSDI 117

Query: 130 SCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-----------GLFDVIVSNPPYIES 177
             +AL  A+  A   G+     + +Q  WF                 FDVIV+NPP++  
Sbjct: 118 HARALNYARVAAAAQGLDSPLVNWVQGSWFEPFSAESADTESTEAQRFDVIVANPPFVIG 177

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             VD L  E    +  +  D G+   +  + + +   +HL   G   + IG+    +
Sbjct: 178 PSVD-LEAE----EGHVYRDSGLPLDAASQLVVEQSVQHLAPGGHAHLLIGWALGEE 229


>gi|218708541|ref|YP_002416162.1| hypothetical protein VS_0507 [Vibrio splendidus LGP32]
 gi|262828815|sp|B7VJ58|TRMN6_VIBSL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218321560|emb|CAV17512.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 242

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 10/159 (6%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             I       +LD+GTGTG + L   +         +DI   A++ A  N   +   +R 
Sbjct: 36  SWINLAPESLVLDIGTGTGLLALMAAQRFEDALISAIDIDQHAIDAATVNIEQSPWQDRI 95

Query: 151 DTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                    +     FD I+ NPPY  S                 +     D L H   +
Sbjct: 96  SLHHDSVLTTDFSQRFDAIICNPPYFNSGEQAQQSQ--------RATARHTDSLDHL-QL 146

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           A             S  +   +    +++ E    +L  
Sbjct: 147 AQRCFEITTDAATASFILPTPEGEGFIKLAEQCGWYLAK 185


>gi|194098667|ref|YP_002001729.1| hypothetical protein NGK_1104 [Neisseria gonorrhoeae NCCP11945]
 gi|254493768|ref|ZP_05106939.1| methyltransferase [Neisseria gonorrhoeae 1291]
 gi|268599042|ref|ZP_06133209.1| methyltransferase [Neisseria gonorrhoeae MS11]
 gi|268601395|ref|ZP_06135562.1| methyltransferase [Neisseria gonorrhoeae PID18]
 gi|268686667|ref|ZP_06153529.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|291043772|ref|ZP_06569488.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|193933957|gb|ACF29781.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226512808|gb|EEH62153.1| methyltransferase [Neisseria gonorrhoeae 1291]
 gi|268583173|gb|EEZ47849.1| methyltransferase [Neisseria gonorrhoeae MS11]
 gi|268585526|gb|EEZ50202.1| methyltransferase [Neisseria gonorrhoeae PID18]
 gi|268626951|gb|EEZ59351.1| methyltransferase [Neisseria gonorrhoeae SK-93-1035]
 gi|291012235|gb|EFE04224.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 135

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 12/135 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               + +    F P     L         L            D+GTG+G +   L K+  
Sbjct: 1   MGGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG- 52

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               +G D + +A+  A++N    G  ++ +  ++D F   EG  D+IV NPP++ +   
Sbjct: 53  IPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPWLPAKPT 110

Query: 181 DCLGLEVRDFDPRIS 195
             +  E   +DP  +
Sbjct: 111 SAV--ESALYDPESA 123


>gi|160936945|ref|ZP_02084309.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440135|gb|EDP17882.1| hypothetical protein CLOBOL_01834 [Clostridium bolteae ATCC
           BAA-613]
          Length = 260

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 71/170 (41%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++K +  ++LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 47  MDAVLLSGFAVVKKGE--KVLDLGTGTGIIPILLTAKTEGSHFTGLEIQEESADMARRSV 104

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             N +  + D +  D   +        FDV+ +NPPY+          + +     + + 
Sbjct: 105 AYNHLEGKVDIVTGDIVEASRLFALASFDVVTTNPPYMNESHGLKNPGDAKAIARHEVKC 164

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L            +    +R L   G   +     + ++++ + +   L
Sbjct: 165 TL----------EDVVREGTRVLKPGGRFFMVHRPRRLIEIITVMKRHGL 204


>gi|332982765|ref|YP_004464206.1| RNA methylase [Mahella australiensis 50-1 BON]
 gi|332700443|gb|AEE97384.1| RNA methylase [Mahella australiensis 50-1 BON]
          Length = 252

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 71/171 (41%), Gaps = 25/171 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  +   F         +D+ L  +  RI+  D+  + DLGTG+G + L L  ++  
Sbjct: 18  GLKIIQNPRLFSFG------IDAVLLANFARIKPGDI--VADLGTGSGVIPLLLSCKTAA 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  G++I  +  ++A+ +   N +  R D ++ D   + +     L D ++SNPPY ++
Sbjct: 70  SKIYGLEIQHEMADMAQRSVRLNDLESRVDIIEGDIRKAGDIIGMSLVDAVISNPPYRKA 129

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + R    ++   +LD           +    S  L   G   +
Sbjct: 130 GSGHVSPSDARAIATYELECTLD----------DVIKAASTLLKNKGRFYM 170


>gi|310764826|gb|ADP09776.1| Putative enzyme [Erwinia sp. Ejp617]
          Length = 245

 Score = 82.1 bits (202), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +V R LD+G+G+G + L L + +        V++   A   A+ N   +   ++ 
Sbjct: 39  WAPVANVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D   W    E  + +IVSNPPY                +   ++          +
Sbjct: 99  RVRQADIVEWTQRCEHRYSLIVSNPPYFSPGSQCASPQRTAARYTTDLT----------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +       +++DG   V +       +V     R   L     D   ND     RVLL
Sbjct: 149 EVLLGCAEELIDEDGFFCVILPEPAGNKLVEQALQRGWHL-RFRTDVADNDTRPPNRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|46143347|ref|ZP_00135433.2| COG2813: 16S RNA G1207 methylase RsmC [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126209459|ref|YP_001054684.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae L20]
 gi|226712982|sp|A3N3U3|RSMC_ACTP2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|126098251|gb|ABN75079.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 329

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTFAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 NIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|224001076|ref|XP_002290210.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973632|gb|EED91962.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 242

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 26/185 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDS------ALAFSLPRIEKRDVVRI---LDLGTGTGAVC 112
           ++R+      +EP  +T LL+D+      A+           + RI   L++G GTG   
Sbjct: 13  HLRMRDYDSVYEPSDDTYLLIDAIGMDIDAIEDDGDDRNNDGIKRIKRTLEIGCGTGVPS 72

Query: 113 LALLKES------PFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSV---- 161
           + L             K    DI+  A+ IA++ A  N + S  F  +Q D  S +    
Sbjct: 73  VYLAMRLLAHGKDYDVKHFVTDINPDAIRIAQATADINNIPSADFHPIQCDLASQLLPEM 132

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN-KD 220
           E   DV++ NPPY+ +        EV       S  GG +G          +++ L    
Sbjct: 133 ENKIDVLIFNPPYVPTPD-----EEVGSNGIEASWAGGTNGRVVLDRALPQIAQLLAFPH 187

Query: 221 GLCSV 225
           G+  V
Sbjct: 188 GVAYV 192


>gi|281422532|ref|ZP_06253531.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205]
 gi|281403356|gb|EFB34036.1| SAM-dependent methyltransferase [Prevotella copri DSM 18205]
          Length = 247

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 34/174 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+G+GTG + L + +  P  + VG+D+   A   A+ N + +   +R +    
Sbjct: 32  QGGRRILDIGSGTGLISLMMAQRFPEAEVVGIDMDADACGQARENVMASPFRDRVEIECC 91

Query: 156 DW---------FSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                        ++E        G+FD IVSNPP+            +++ D + ++  
Sbjct: 92  RLQDFGGTSEAAEALETADGLKAAGVFDAIVSNPPFFVDS--------LKNPDSKRTMAR 143

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR----KLFLVN 248
             D L   R +  GV R L+ DG+ S  +     V+VV  F +       +L+ 
Sbjct: 144 HTDSLPF-RDLFAGVKRLLSDDGIFSAIVP----VEVVEQFVAESCILGFYLIR 192


>gi|254900563|ref|ZP_05260487.1| hypothetical protein LmonJ_12134 [Listeria monocytogenes J0161]
 gi|254913486|ref|ZP_05263498.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937933|ref|ZP_05269630.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|258610542|gb|EEW23150.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293591494|gb|EFF99828.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 201

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +A+E+AK NA  N ++      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YNHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|47096510|ref|ZP_00234101.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|47015101|gb|EAL06043.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
          Length = 204

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +A+E+AK NA  N ++      +
Sbjct: 60  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRAIELAKENAEINKITNT-HIYE 118

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 119 SSVYDNVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 153

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 154 YNHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 193


>gi|307258110|ref|ZP_07539862.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863473|gb|EFM95404.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 329

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRRTLAENSLEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 HIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|325567403|ref|ZP_08144070.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC
           12755]
 gi|325158836|gb|EGC70982.1| methyltransferase domain protein [Enterococcus casseliflavus ATCC
           12755]
          Length = 201

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 73/206 (35%), Gaps = 41/206 (19%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +    +    +D+     +T       L  +    E  +   +LD+G G G V LAL   
Sbjct: 22  ELRGKKFHFVTDSGVFSRDTVDYGSRVLIDAFEWAELPEG-SLLDVGCGYGPVGLALAYA 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           S       +DI+ +A+++AK NA  NG+ E+ D  QS+ ++ +    +  I+SNPP    
Sbjct: 81  SQRP-VEMIDINQRAVDLAKGNAQRNGI-EQVDIHQSNIYAQLNQPAYAAILSNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---- 233
                                   G      I  G    L   G  ++ I   Q      
Sbjct: 138 ------------------------GKEVVHEILTGAFPLLKTGGTLTIVIQKKQGAPSAQ 173

Query: 234 -DVVRIF-------ESRKLFLVNAFK 251
             +   F       + +  +++ + K
Sbjct: 174 KKMQETFGNAEIIKKDKGYYIIQSVK 199


>gi|251793532|ref|YP_003008261.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700]
 gi|262827860|sp|C6AQR4|TRMN6_AGGAN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|247534928|gb|ACS98174.1| phosphatidylserine synthase [Aggregatibacter aphrophilus NJ8700]
          Length = 234

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 20/141 (14%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +     +ILDLG+G+G + L L + S    +   V+I   A + A+ NA+ +   E+ 
Sbjct: 32  WADVMQAKQILDLGSGSGLIALMLAQRSSAESRICAVEIDPAAAQQARENALASPWKEKI 91

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D     +     FD+IV+NPPY E+ I        RD +   +           +
Sbjct: 92  QVYQQDIDSFCTQTAQRFDLIVANPPYFEAGIA------CRDDERNTA-------RYFTQ 138

Query: 208 ---TIADGVSRHLNKDGLCSV 225
                     R L  +G  S 
Sbjct: 139 SHLHWLQTAQRCLAPNGKISF 159


>gi|119961880|ref|YP_947365.1| methyltransferase small subunit [Arthrobacter aurescens TC1]
 gi|119948739|gb|ABM07650.1| putative methyltransferase small domain protein [Arthrobacter
           aurescens TC1]
          Length = 204

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 12/158 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
             L  SS  F P       VD   A     +        +LD+G G G + L L   +P 
Sbjct: 29  RHLQTSSGIFSPDG-----VDKGTAVLFAEVPPPSPKGHLLDIGCGWGPIALTLGLMAPH 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ + + +   NA   G++    +L  +   +VE  FD I SNPP    +  D
Sbjct: 84  AHVHAVDVNERCIALTNENATALGLTNVAASLPHEVDPAVE--FDTIWSNPPI--RIGKD 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLN 218
            L   +  + PR++  GG   L   + + +D + R L 
Sbjct: 140 ELHSLLLTWLPRLAP-GGNAWLVVQKNLGSDSLQRWLA 176


>gi|319891440|ref|YP_004148315.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161136|gb|ADV04679.1| Predicted O-methyltransferase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465390|gb|ADX77543.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 241

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 33/209 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
             E +  ++      ++R+  +   F    +  LL            E R   RILD+  
Sbjct: 4   PGERLDYLIRE----DLRIIQNDAVFSFSTDALLL--------GHFTEVRKRDRILDMCA 51

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----E 162
           G G + L L  +       GV+I  + + +A  +   N + +R   ++ D  + +     
Sbjct: 52  GNGVIPLLLSDKGNNV-ITGVEIQPQLVNMAVRSVQYNHLEDRITMVEMDINALIQAYSP 110

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             FD+I  NPPY ++   +   LE       +   +LD         R      +  L +
Sbjct: 111 AQFDLITCNPPYFKANQTNQHQLEAHKIARHEIYCTLD------DCLR----VSNHLLKE 160

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            G   +     +   ++ +FES + + + 
Sbjct: 161 GGRVVMVH---RAERMLDLFESMRHYRIE 186


>gi|331092559|ref|ZP_08341380.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330400671|gb|EGG80277.1| hypothetical protein HMPREF9477_02023 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 246

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 66/153 (43%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R++K +  ++LD+GTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLSNFARVKKGE--KVLDIGTGTGIIPILLEAKTEGEHFTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + ++ D +  D   +V       FDV+ +NPPY+     +        +   +   
Sbjct: 90  AYNHLEDKIDIVTGDVKEAVNLFGSVFFDVVTTNPPYMIGAHGLQNKDSAKAIARHEVLC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            LD           I    ++ L   G   +  
Sbjct: 150 DLD----------DILRESAKVLRPGGRFYMVH 172


>gi|318080200|ref|ZP_07987532.1| modification methylase, HemK family protein [Streptomyces sp.
           SA3_actF]
          Length = 129

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 12/113 (10%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           A  ++   L  V G ++ +     D VLD          + R +  E +  ++G   F+ 
Sbjct: 19  AEDEAELLLAAVPGDAAGRDGAGRDGVLD--------ALVARRVAGEPLEHVVGHAVFHG 70

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +R+ +    F PR  +E LV  ALA     +     V +LDL  G+GA+ LAL
Sbjct: 71  LRIAVGPGVFVPRRRSEFLVARALA----GVRAEGAVTLLDLCCGSGALGLAL 119


>gi|148665915|gb|EDK98331.1| HemK methyltransferase family member 2, isoform CRA_b [Mus
           musculus]
          Length = 181

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 15/162 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            D +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  RDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCL 183
           DI+ +A       A  N V  +     L       ++G  D++V NPPY+      V   
Sbjct: 77  DINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYVVTPPEEVGSR 136

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           G+E        +  GG +G              L+  GL  +
Sbjct: 137 GIEA-------AWAGGRNGREVMDRFFPLAPELLSPRGLFYL 171


>gi|325956086|ref|YP_004286696.1| methyltransferase small [Lactobacillus acidophilus 30SC]
 gi|325332651|gb|ADZ06559.1| Methyltransferase small [Lactobacillus acidophilus 30SC]
          Length = 206

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 37/177 (20%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRIDYGSGVLIKTMKDVTFPKEG------ILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P      VD++ + L +A+ NA  N +S   D   SD ++ V+    F +I++NPP   
Sbjct: 85  WPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQVDNDKKFGLILTNPPIRA 143

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                    G      I  G + HL   G+  V I   Q  
Sbjct: 144 -------------------------GKKVVNEILMGANEHLVSGGVLLVVIQKKQGE 175


>gi|315037605|ref|YP_004031173.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112]
 gi|312275738|gb|ADQ58378.1| Methyltransferase small [Lactobacillus amylovorus GRL 1112]
 gi|327182901|gb|AEA31348.1| Methyltransferase small [Lactobacillus amylovorus GRL 1118]
          Length = 206

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 37/177 (20%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +    + P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRIDYGSGVLIKTMKDVTFPKEG------ILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P      VD++ + L +A+ NA  N +S   D   SD ++ V+    F +I++NPP   
Sbjct: 85  WPDQTVDMVDVNERGLNLARQNAKNNHIS-NVDIYTSDCYAQVDNDKKFGLILTNPPIRA 143

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                    G      I  G + HL   G+  V I   Q  
Sbjct: 144 -------------------------GKKVVNEILMGANEHLVSGGVLLVVIQKKQGE 175


>gi|239918289|ref|YP_002957847.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
 gi|239839496|gb|ACS31293.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
          Length = 558

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L V  A        ++R V R LD+G G G   L LL  +        D+S +AL 
Sbjct: 164 PEHVLGVGRASPTLAGATQRRPVARALDVGVGCGIQTLHLLAHAD--HVTATDLSERALA 221

Query: 136 IAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
             + N + N          + +R      D  + V G  FD++VSNPP++ +   D    
Sbjct: 222 FTRFNLLLNADVLGLDRERLEDRVRLAAGDLLAPVAGERFDLVVSNPPFVITPRTDPAAP 281

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  +      DGG +G      +   +   L + G   +
Sbjct: 282 -VLTY-----RDGGREGDRIVAELIAALPDVLAEGGTAQL 315


>gi|229817998|ref|ZP_04448280.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM
           20098]
 gi|229784602|gb|EEP20716.1| hypothetical protein BIFANG_03285 [Bifidobacterium angulatum DSM
           20098]
          Length = 211

 Score = 81.7 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 21/172 (12%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E  +   +LDLG G G + L+L   SP      +D++ +ALE+   NA  NG   
Sbjct: 50  LKQAPEPPEHGNLLDLGCGWGPIALSLAMASPEANVWALDVNERALELTALNAKRNGCG- 108

Query: 149 RFDTLQSDWFS--------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              T+++D  +        S +  FD I SNPP    +  + L   + ++ PR+S D G 
Sbjct: 109 NVRTVRTDADALPVEPDAISPDLTFDAIWSNPPI--RIGKEALHTLLMNWLPRLS-DTGT 165

Query: 201 DGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             L   + + AD +   L+       E+G      V +   ++   ++   +
Sbjct: 166 AYLVVQKNLGADSLIDWLSN------ELGD--GYAVSKYHSAKGFRVIEVSR 209


>gi|88604258|ref|YP_504436.1| putative methylase [Methanospirillum hungatei JF-1]
 gi|88189720|gb|ABD42717.1| Putative methylase [Methanospirillum hungatei JF-1]
          Length = 164

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 19/155 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           + E +    +L++GTG+G V  ++            DI+  A+  A              
Sbjct: 3   QAEVKPDDIVLEVGTGSGYVASSIQDCR---MVFATDINPHAVLSAHE--------RGIQ 51

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHYRTIA 210
            +++D  + +  +F +I+ NPPYI +        + R  D    +LDGG DG        
Sbjct: 52  VVRTDLIAGLRRIFSLILFNPPYIPTR------PDERCHDWLEYALDGGPDGRGPLTRFL 105

Query: 211 DGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKL 244
           D V+  L   G   + I   Q       IF+    
Sbjct: 106 DQVADVLIPGGRVLIVISSLQYFEKCEEIFKKTGF 140


>gi|116629510|ref|YP_814682.1| ribosomal protein L11 methylase [Lactobacillus gasseri ATCC 33323]
 gi|311110846|ref|ZP_07712243.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           MV-22]
 gi|122273552|sp|Q043X8|PRMA_LACGA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116095092|gb|ABJ60244.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactobacillus gasseri ATCC 33323]
 gi|311066000|gb|EFQ46340.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           MV-22]
          Length = 315

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDIGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N V    +  +++    ++  +D+IV+N                      ++  
Sbjct: 217 KENIALNDV-NNINVRKANLLKDIDDKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLNK+G      I Y Q   V +        +
Sbjct: 253 ------DILLELIPDLDSHLNKEGKVIFSGIDYLQLPKVEKALAENNFEI 296


>gi|308198068|ref|XP_001387053.2| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|149389016|gb|EAZ63030.2| predicted protein [Pichia stipitis CBS 6054]
          Length = 232

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 21/202 (10%)

Query: 71  TFEPRPETELLVDSALAFS--LPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            +EP  ++ LL+D        L       +  + ++GTG+G V   L K        +  
Sbjct: 15  VYEPSEDSFLLLDCFEQELSFLTTKFSTTIPIVTEIGTGSGIVTTFLQKNILQKAIYIST 74

Query: 128 DISCKALEIAKSNAVTNGVS----------------ERFDTLQSDWFSSVEGLFDVIVSN 171
           D++  A + A      N                   E  D  Q D  S++    DV++ N
Sbjct: 75  DVNPHACKTALHTVKVNNADSESEKSEKSKNEKSTPELVDICQMDLVSAIRPKIDVLLFN 134

Query: 172 PPYIESVIVDCLGLEVRDFDPR-ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PPY+ +  V  +  +  D     ++L GG DG+     + D +   L ++G+  +     
Sbjct: 135 PPYVPAGEVPTIPNKEDDSTWLDLALLGGEDGMVITWKVLDSLDSILAENGVAYILFCAR 194

Query: 231 QKVD-VVRIFESRKLFLVNAFK 251
            K D V      R   +    +
Sbjct: 195 NKPDFVANEMTKRGWKVKEIIQ 216


>gi|325962850|ref|YP_004240756.1| 16S rRNA m(2)G 1207 methyltransferase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323468937|gb|ADX72622.1| 16S rRNA m(2)G 1207 methyltransferase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 207

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 18/190 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
            +L  SS  F P       +D   A  L  +        +LD+G G G + L +   +P 
Sbjct: 29  RKLQTSSGIFSPDG-----IDKGTAILLAEVPAPAPQGNLLDIGCGWGPIALTMALRAPS 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VD++ + + +   NA   G++        +     +  FD I SNPP    +  D
Sbjct: 84  AQVYAVDVNERCITLTNENAAALGLT-NVKASTPEAVDP-DIRFDTIWSNPPI--RIGKD 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            L   ++ + PR++  GG   L   + +     +        + E+  ++   V R   S
Sbjct: 140 ELHSLLKLWLPRLAP-GGTAWLVVQKNLGSDSLQR-----WLAAEL--DESFAVSREATS 191

Query: 242 RKLFLVNAFK 251
           +   ++   K
Sbjct: 192 KSFRILKVRK 201


>gi|266620882|ref|ZP_06113817.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi
           DSM 13479]
 gi|288867462|gb|EFC99760.1| putative N-6 adenine-specific DNA methylase [Clostridium hathewayi
           DSM 13479]
          Length = 245

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 19/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+++ +  + +DLGTGTG + + L  +       G++I  +  ++A  + 
Sbjct: 32  MDAVLLSGFARVKQGE--KAIDLGTGTGIIPILLEAKYEGEHYTGLEIQDEMADMAARSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV---IVDCLGLEVRDFDPRI 194
             N + E+   ++ D   +        FDV+ SNPPY+          L   +   +   
Sbjct: 90  ALNHLEEKVSIVKGDIKEASRLFGAASFDVVTSNPPYMNDAHGLKNPDLPKAISRHEVLC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +LD         R      +R L   G   +    ++ ++++      KL
Sbjct: 150 TLD------DVTR----EAARLLRPGGRFYMVHRPHRLIEIITALTKYKL 189


>gi|149184033|ref|ZP_01862393.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1]
 gi|148848261|gb|EDL62551.1| hypothetical protein BSG1_11471 [Bacillus sp. SG-1]
          Length = 201

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 62/178 (34%), Gaps = 37/178 (20%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  RL      F        + LL+DS         E      +LD+G G G V L++ K
Sbjct: 26  HKFRLKTDQGVFSKSEIDFGSRLLIDSF-------TENEITGPLLDVGCGYGPVGLSMAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
             P      VD++ +A+ +A+ NA  NG+S      +S  F +V    F  +++NPP   
Sbjct: 79  AFPERTVHMVDVNVRAIGLAEENARANGIS-NASIYESSCFKNVSEKNFSAVLTNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                                    G S    I +    HL   G   V I   Q   
Sbjct: 138 -------------------------GKSVVHEILEDSYNHLAVGGELWVVIQKKQGAA 170


>gi|226222880|ref|YP_002756987.1| hypothetical protein Lm4b_00272 [Listeria monocytogenes Clip81459]
 gi|225875342|emb|CAS04039.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 201

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKVFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + SV    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDSVTANDYQAIISNPPIRA-------------------------GKRIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|315640187|ref|ZP_07895307.1| methyltransferase domain protein [Enterococcus italicus DSM 15952]
 gi|315484069|gb|EFU74545.1| methyltransferase domain protein [Enterococcus italicus DSM 15952]
          Length = 200

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 53/220 (24%)

Query: 52  HRILGWRDF----YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDL 104
              +    F    +  R    S  F        + +L+D+     LP         +LD+
Sbjct: 13  AHHVNEWTFELKDHTFRFLTDSGVFSKGTVDFGSRVLIDTFTTAGLPE------GTLLDV 66

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEG 163
           G G G + L+L   +   +   VDI+ +A+ +A+ NA  N + +      S+ + + +E 
Sbjct: 67  GCGYGPIGLSLAYATKR-QVEMVDINERAVSLAQQNATLNHI-DTVTIHPSNIYENVLEA 124

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +  IVSNPP                            G     TI  G    L   G  
Sbjct: 125 RYAAIVSNPPIRA-------------------------GKKVVHTILSGAYERLLSGGSL 159

Query: 224 SVEIGYNQKVDVVR------------IFESRKLFLVNAFK 251
           ++ I   Q     +            I + +  +++ + K
Sbjct: 160 TIVIQKKQGAPTAQKKMIEVFGNAEVIKKEKGYYIIKSIK 199


>gi|163753802|ref|ZP_02160925.1| methyltransferase small [Kordia algicida OT-1]
 gi|161326016|gb|EDP97342.1| methyltransferase small [Kordia algicida OT-1]
          Length = 218

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 28/190 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  + + +S++ F P       + + +     +         L+LG G+G +  +L   S
Sbjct: 29  YEGITVNVSAEVFPP----HFTISTKIFLEFIKPLDLKNKNFLELGCGSGII--SLFAAS 82

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
                   DI+  A+   K  +  N +      + SD F ++    FD I+ NPPY    
Sbjct: 83  KGANVTASDINKIAISALKEASEANEIPLNV--VYSDLFENLSNQTFDYIIINPPYYPKA 140

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS----VEIGYNQKVD 234
                       D   +   G +   ++  +   + +HL  +         EI       
Sbjct: 141 P---------QNDKERAWFCGEN-FEYFEKLFAQLPQHLAPNTWMILSEDCEI-----EH 185

Query: 235 VVRIFESRKL 244
           + +I  + KL
Sbjct: 186 IKKIASNNKL 195


>gi|257051707|ref|YP_003129540.1| methylase [Halorhabdus utahensis DSM 12940]
 gi|256690470|gb|ACV10807.1| methylase [Halorhabdus utahensis DSM 12940]
          Length = 204

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 23/195 (11%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            +    ++ LL ++A+  +          R +D+GTG+G V  AL +     + VG D++
Sbjct: 27  VYGASEDSHLLAEAAVEGATA------GERAIDVGTGSGYVASALAEA--GVEVVGTDLN 78

Query: 131 CKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
             A + A+      G+   R + L      S    FD++  NPPY+ S      G  +  
Sbjct: 79  PAACQQAR----DAGIPVARANLLDPFLADS----FDLVTFNPPYLPSTPDTEWGDWM-- 128

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKLFLVN 248
              + +L GG DG +        V R L   G   + +        V     ++ L    
Sbjct: 129 ---QTALSGGEDGRAAVDPFLADVGRVLEDGGRALLLVSSLTGIEAVQEYATAQGLESSI 185

Query: 249 AFKDYGGNDRVLLFC 263
             ++    +R+++  
Sbjct: 186 VAEESFPFERLVVLR 200


>gi|323357971|ref|YP_004224367.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
 gi|323274342|dbj|BAJ74487.1| methylase of polypeptide chain release factors [Microbacterium
           testaceum StLB037]
          Length = 504

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 12/151 (7%)

Query: 74  PRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P PE  +L     + +L R++        LD+GTG G   L L +  P  + V  DIS +
Sbjct: 135 PLPEDHVLGVGGASQTLARLQLTWRAASALDIGTGCGIQALRLRRLVP--RVVATDISER 192

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL   + NA+ N V    +T     F  V G  F+ + SNPP++ +  V  +      ++
Sbjct: 193 ALRFTRLNALLNDVDG-IETRHGSLFDPVAGETFERVASNPPFVITPRVAGVPA----YE 247

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            R   DGG++G +   ++  GV  HL   G+
Sbjct: 248 YR---DGGLEGDALVASVIRGVGAHLAPGGV 275


>gi|297538014|ref|YP_003673783.1| methyltransferase small [Methylotenera sp. 301]
 gi|297257361|gb|ADI29206.1| methyltransferase small [Methylotenera sp. 301]
          Length = 392

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 28/194 (14%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++  S   F P R E   LVD                   D+GTGTG +  A+L      
Sbjct: 183 KIFPSYGVFSPIRGEYLDLVDV-------TPLPIPCNLAFDIGTGTGVLA-AILANRGIT 234

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVD 181
             +  D S +AL+ A  N    G+      ++++ F S E G  D+IV NPP++ +    
Sbjct: 235 NIIATDNSHRALDCALKNVNLLGLKNNVKLVEANLFPSAEYGKADLIVCNPPWLPAHPSS 294

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----E-IGYNQKVD 234
            L   + D   ++ L G ++GL+           HLN +  G   +    E +G   + +
Sbjct: 295 ALESAIYDEKSKM-LKGFLNGLN----------AHLNTNGEGWLILSNFAELLGLRTREE 343

Query: 235 VVRIFESRKLFLVN 248
           ++   +   L ++ 
Sbjct: 344 LLGWIDEAGLKVIE 357


>gi|326316088|ref|YP_004233760.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372924|gb|ADX45193.1| methyltransferase small [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 388

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 23/165 (13%)

Query: 64  RLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           R+      F P R E   LV      +             D+GTGTG +  A+L      
Sbjct: 181 RIHPHYGVFSPVRGEYIDLVAQVPLPAGAAALA------FDIGTGTGVLA-AVLARRGVR 233

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V  D   +AL  A+ N     V    D LQ+D F    G   ++V NPP++ +     
Sbjct: 234 RVVATDQDPRALACARENLQRLRVLPAVDILQADLFPP--GRAPLVVCNPPWVPARAAAP 291

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
           +   V D D R+            R    G++ HL  D  G   +
Sbjct: 292 VERAVYDEDSRM-----------LRGFLGGLAGHLEPDGEGWLIL 325


>gi|56961923|ref|YP_173645.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16]
 gi|56908157|dbj|BAD62684.1| 16S rRNA G1207 methylase [Bacillus clausii KSM-K16]
          Length = 219

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 62/195 (31%), Gaps = 45/195 (23%)

Query: 65  LTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            T     F        + LL+++ +   L          ILD+G G G + LAL K  P 
Sbjct: 45  FTTDRGVFSKGEVDFGSRLLIETFVFPGLD-------GDILDVGCGYGPIGLALAKADPS 97

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWF-SSVEGLFDVIVSNPPYIESVI 179
            + V +D++ +A ++A+ NA  NGV        +           +  +V+NPP      
Sbjct: 98  RRVVMIDVNERACQLAEKNAKANGVKNADIHFDERGLAGFERSARYAAVVTNPPIRA--- 154

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----D 234
                                 G      I +     L  +G C V I   Q        
Sbjct: 155 ----------------------GKDVVHDIYEQAYERLIPEGECWVVIQKKQGAPSTKQK 192

Query: 235 VVRIFESRKLFLVNA 249
           +  +F       V  
Sbjct: 193 LAELF---GTENVEV 204


>gi|295108645|emb|CBL22598.1| Predicted O-methyltransferase [Ruminococcus obeum A2-162]
          Length = 250

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I K +   +LD+GTGTG + + L  +       G++I  +  ++A+ + 
Sbjct: 36  MDAVLLSGFANIRKNET--VLDMGTGTGIIPILLKSKGKGGHLTGLEIQEECADMARRSV 93

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N +    D +  D   +        FDV+ SNPPY+     +    +   +   +   
Sbjct: 94  RYNSLESDIDIICGDIKEAAATFGAASFDVVTSNPPYMIGQHGIQNPYMAKAIARHEILC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L            +    +  L   G   +  
Sbjct: 154 TL----------EDVVSQAANVLKDRGRFFMVH 176


>gi|85859820|ref|YP_462022.1| methyltransferase [Syntrophus aciditrophicus SB]
 gi|85722911|gb|ABC77854.1| methyltransferase [Syntrophus aciditrophicus SB]
          Length = 254

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 22/176 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I  R    +LD+GTG+G + L      P  +  G+DI  + +E+A  +A  N + ER   
Sbjct: 40  IRLRRNESLLDMGTGSGVIALITAMRRPDVRIAGIDIQEEMVEMASRSAALNSLEERLTF 99

Query: 153 LQSDWFS----SVEGLFDVIVSNPPY---IESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
              D  S         FD +V NPPY       I       +   + R +L         
Sbjct: 100 KAGDIHSIRRIFDSESFDAVVVNPPYRKLHSGRINPRGEKALARHEVRGTL--------- 150

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-----IFESRKLFLVNAFKDYGGN 256
            R   +  S  L   G   V     +   ++      + E ++  ++++  D  G 
Sbjct: 151 -RDFLEAASYVLRPGGRIFVIYPIRRMAALIAGMRKTVLEPKRCRIIHSRCDTEGI 205


>gi|300811169|ref|ZP_07091681.1| methyltransferase small domain protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300497873|gb|EFK32883.1| methyltransferase small domain protein [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 200

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+ LT  +  F + R +  + +L++  L   LP         ILD+G G G + L   K+
Sbjct: 27  NLNLTTDAGVFSKNRVDYGSGVLIEQMLDQELP------GGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+        ++  +   SD +  V G + +IV+NPP     
Sbjct: 81  WPGRQVDMVDVNERAMDLARR-NAAANGADNVNIFASDRYQEVSGQYAMIVTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G + + +I      HL   G+  V I   Q      +
Sbjct: 138 -----------------------GKAIWSSILSEAKDHLTDGGILLVVIQKKQGAPSAKK 174

Query: 238 IFES 241
           +  +
Sbjct: 175 LMAA 178


>gi|283477517|emb|CAY73433.1| Uncharacterized protein yfiC [Erwinia pyrifoliae DSM 12163]
          Length = 245

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +V R LD+G+G+G + L L + +        V++   A   A+ N   +   ++ 
Sbjct: 39  WAPVANVQRALDIGSGSGLIALMLAQRTADRVHIDAVELDEAAALQAQENVAASPWPDKV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D   W    E  + +IVSNPPY                +   ++          +
Sbjct: 99  RVQQADIVEWTQRCEHRYSLIVSNPPYFSPGSQCASPQRTAARYTTDLT----------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +       +++DG   V +       +V     R   L     D   ND     RVLL
Sbjct: 149 EVLLGCAEELIDEDGFFCVILPEPAGNKLVEQALQRGWHL-RFRTDVADNDTRPPNRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|313817525|gb|EFS55239.1| methyltransferase, HemK family [Propionibacterium acnes HL046PA2]
          Length = 338

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|18978023|ref|NP_579380.1| hypothetical protein PF1651 [Pyrococcus furiosus DSM 3638]
 gi|18893806|gb|AAL81775.1| hypothetical protein PF1651 [Pyrococcus furiosus DSM 3638]
          Length = 195

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 72/206 (34%), Gaps = 46/206 (22%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL++S +         R   R+ DLG G G + + +  
Sbjct: 25  YCFKFITASGVFSFGKLDRGTELLIESMVL--------RPNWRVFDLGCGYGPIGI-VAS 75

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  V  DI+ +A+ IA+ N   N V+   +    + +  V+G  F  I++NPP   
Sbjct: 76  RFVEY-VVMSDINRRAVSIARKNLKINNVT-NAEVRWGNLYEPVKGEKFHSIITNPPIHA 133

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-V 235
                                    G    R I     ++L+  G+  + +        +
Sbjct: 134 -------------------------GKEILREIVINAPKYLHDGGMLQIVVKTKLGAKFI 168

Query: 236 VRIFESRKLFLVNA-----FKDYGGN 256
             + E     +V       ++ Y G 
Sbjct: 169 KSLMEDTFTEVVELAKGSGYRVYAGI 194


>gi|289803904|ref|ZP_06534533.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           AG3]
          Length = 62

 Score = 81.7 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPPYI++        +VR F+PR +L    +G++    I D   + L   G   +E G+ 
Sbjct: 1   NPPYIDAQDPHLSEGDVR-FEPRSALVADENGMADLTHIIDNARQMLTPGGFLLLEHGWR 59

Query: 231 QKV 233
           Q  
Sbjct: 60  QGE 62


>gi|257460669|ref|ZP_05625770.1| methyltransferase small [Campylobacter gracilis RM3268]
 gi|257442000|gb|EEV17142.1| methyltransferase small [Campylobacter gracilis RM3268]
          Length = 413

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 14/158 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD+G G G + L L ++        ++I  + LEI K N+  NG++   + L +D+   
Sbjct: 215 VLDVGAGCGILGLLLKRDFKSINLSLLEIQERNLEILKLNSSQNGLAA--EILHADFAEF 272

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  FD IVSNPP+    I           +P ++L      LS  R      + HL  
Sbjct: 273 KSEKRFDFIVSNPPFYRERIS-------LSKEPHMALSKSTASLS-LRDFVRSANAHLKP 324

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254
            G         +   +  +    +L L      + D  
Sbjct: 325 GGTLIFCYEAGKLAKICELLGEFRLNLTRLGFVYPDIS 362


>gi|315633345|ref|ZP_07888636.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393]
 gi|315477845|gb|EFU68586.1| metallothionein SmtA [Aggregatibacter segnis ATCC 33393]
          Length = 235

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 19/166 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +     +ILDLG+G+G + L L +  S   +   V+I   A + A  N + +    + 
Sbjct: 32  WADVTQANQILDLGSGSGLIALMLAQRSSAESRICAVEIDHAAAQQACENVLISPWKNKI 91

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-DGGIDGLSHY 206
              Q D     +     FD+IV+NPPY ++ +      + R+ +   +        L   
Sbjct: 92  QVYQQDIDSFCTQTAERFDLIVANPPYFQTGV------DCRNEERNTARYFAAQSHL--- 142

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
               +  +  L   G  S  + ++       + +S  L+ V    D
Sbjct: 143 -HWLETAAACLAPKGKISFVLPFDAGE---TLLKSTALYCV-VRCD 183


>gi|165977451|ref|YP_001653044.1| 16S ribosomal RNA m2G1207 methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|226712984|sp|B0BU33|RSMC_ACTPJ RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|165877552|gb|ABY70600.1| putative ribosomal RNA small subunit methyltransferase C
           [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
          Length = 329

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENALDG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 NIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|152977707|ref|YP_001343336.1| methyltransferase type 12 [Actinobacillus succinogenes 130Z]
 gi|262827845|sp|A6VKA4|TRMN6_ACTSZ RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|150839430|gb|ABR73401.1| Methyltransferase type 12 [Actinobacillus succinogenes 130Z]
          Length = 236

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  +   ILDLGTG+G + L L + S    +  GV+    A   A+ N   +  + R 
Sbjct: 33  WADLANSRSILDLGTGSGLIALMLAQRSDEDVQIHGVERDPAAARQAQENFRASPWAHRL 92

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                D           FD IV+NPPY    +      + R+     +       LSH  
Sbjct: 93  YLHFGDIADFAQKCGQKFDNIVANPPYFAQGV------DCRNHARNAARY--TAALSHA- 143

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +  S  L + G     +   Q   + +
Sbjct: 144 QWLEIASSLLTEQGTIHFVLPAEQGKTLKQ 173


>gi|282852112|ref|ZP_06261470.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           224-1]
 gi|282556872|gb|EFB62476.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           224-1]
          Length = 226

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 74  TTQLVLLAMERALVK-----PMSVLDIGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 127

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N V    +  +++    ++  +D+IV+N                      ++  
Sbjct: 128 KENIALNDV-NNINVRKANLLKDIDDKYDLIVAN---------------------ILA-- 163

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLNK+G      I Y Q   V +        +
Sbjct: 164 ------DILLELIPDLDSHLNKEGKVIFSGIDYLQLPKVEKALAENNFEI 207


>gi|322515341|ref|ZP_08068337.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976]
 gi|322118628|gb|EFX90850.1| metallothionein SmtA [Actinobacillus ureae ATCC 25976]
          Length = 236

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           V +ILDLGTGTG V + L + +    +   +++   A + A  N   +  S+R    Q D
Sbjct: 39  VEQILDLGTGTGLVAVMLAQRTAETTQITALELEPNAYQQAVENCQNSVFSDRLHVCQGD 98

Query: 157 WF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 E  FD+IVSNPPY    +        RD    ++       L+          +
Sbjct: 99  VLQHHFEKKFDLIVSNPPYFTDSLASRSQ--ARD----LARAATQSHLA----WLLQAKQ 148

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            L++ G  +  + ++    +    ++  LF     K
Sbjct: 149 WLSEQGEITFILPFDTAEKLRVQSQTSGLFCTKICK 184


>gi|237738115|ref|ZP_04568596.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229419995|gb|EEO35042.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 245

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 82/192 (42%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++   +D F    ++ L+ + A          R    I+DLGTG G + L L K++  
Sbjct: 17  DMKIIQRADHFSFSIDSLLVSEFATIT-------RTTKNIIDLGTGNGVIPLFLSKKTK- 68

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI-- 175
            K  G++I   +  +AK N   N + E+ + +  D  +      +G FD++V+NPP+   
Sbjct: 69  AKITGIEIQSISSALAKRNIELNNLQEQIEIINDDMKNWNKYFRKGYFDLVVTNPPFFRF 128

Query: 176 ---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              E  + D   L +   +  I+L+           + +  S  L   G   +    ++ 
Sbjct: 129 HGEEKQLNDLDQLSLARHEISINLNS----------LIETASNLLKDKGYFVMVHRVDRL 178

Query: 233 VDVVRIFESRKL 244
           +D++   +   L
Sbjct: 179 IDIIETMKKYSL 190


>gi|330833924|ref|YP_004408652.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
 gi|329566063|gb|AEB94168.1| rRNA methyltransferase small [Metallosphaera cuprina Ar-4]
          Length = 186

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 27/169 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +       ++DLG G G + + L  ++P  +   +D +  A++ +K N  
Sbjct: 32  DLGTRVLLENLIIPKEGTVVDLGCGYGPIGIYLALQNPSLRVYMLDANPLAVKASKENVE 91

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              + ER   L+SD  S+++     I SNPP                            G
Sbjct: 92  RYKLKERVTVLRSDVLSALDVKASAIFSNPPL-------------------------SKG 126

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +     +A   S  L + G   + + Y  +V+ +++F       V   K
Sbjct: 127 VEILEKLAVEASEKLERAGYIQMVL-YRGEVNAIKVFSKY-FSKVEVLK 173


>gi|189425799|ref|YP_001952976.1| methyltransferase small [Geobacter lovleyi SZ]
 gi|189422058|gb|ACD96456.1| methyltransferase small [Geobacter lovleyi SZ]
          Length = 245

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 19/194 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L      +    +  LL D A               I+DLGTG G + L L + + 
Sbjct: 15  FGLTLLQPKQGYRFSLDPLLLCDFA--------NASQETSIVDLGTGCGVMALVLARMAA 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
                  +    A  +A+ N   NG++ER   L  D       L     D++VSNPPY +
Sbjct: 67  AAHITAFEQDDAAASLARQNVGLNGLAERVTVLHDDVLQVRRHLPVSSCDLVVSNPPYRK 126

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                      +      +  G  D               +   G   +    ++ V+++
Sbjct: 127 QGRGRLNPHPGKLAARHETTAGLAD-------FLAAAKYLVKPSGRICMVHHPDRLVELM 179

Query: 237 RIFESRKLFLVNAF 250
               ++KL ++   
Sbjct: 180 VEAAAQKLAVLRLR 193


>gi|281415516|ref|ZP_06247258.1| methyltransferase family protein [Micrococcus luteus NCTC 2665]
          Length = 558

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L V  A        ++R V R LD+G G G   L LL  +        D+S +AL 
Sbjct: 164 PEHVLGVGRASLTLAGATQRRPVARALDVGVGCGIQTLHLLAHAD--HVTATDLSERALA 221

Query: 136 IAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGL 185
             + N + N          + +R      D  + V G  FD++VSNPP++ +   D    
Sbjct: 222 FTRFNLLLNADVLGLDRERLEDRVRLAAGDLLAPVAGERFDLVVSNPPFVITPRTDPAAP 281

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  +      DGG +G      +   +   L + G   +
Sbjct: 282 -VLTY-----RDGGREGDRIVAELIAALPDVLAEGGTAQL 315


>gi|154488912|ref|ZP_02029761.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
           L2-32]
 gi|154083049|gb|EDN82094.1| hypothetical protein BIFADO_02221 [Bifidobacterium adolescentis
           L2-32]
          Length = 214

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 12/163 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
                E  +    LDLG G G + L L  ESP      +D++ +ALE+ + NA  NG+  
Sbjct: 63  LRQAPEPPEEGTFLDLGCGWGPIALTLGFESPKADIWALDVNERALELTRRNAELNGMGN 122

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                     + +   FD+I SNPP    V  + L   +  + PR++  GG   L   R 
Sbjct: 123 IHAVTAEQVPAVL--TFDLIWSNPPI--RVGKEALHELLMTWLPRLN-AGGAAYLVVQRN 177

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +    S  L      + ++G     +V +   S+   ++   +
Sbjct: 178 L---GSDSLIP--WLATQLGD--GFEVGKYASSKGFRVIEVVR 213


>gi|327438261|dbj|BAK14626.1| 16S RNA G1207 methylase RsmC [Solibacillus silvestris StLB046]
          Length = 200

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 77/207 (37%), Gaps = 45/207 (21%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKE 118
           + TL  +TF    +T +     VD      +   E   +  +L D+G G G + L++ K 
Sbjct: 20  KFTLLGNTFTFETDTGVFSKSEVDFGSRVLIDVFEMPKIDGVLLDVGCGYGPIGLSIAKN 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
           +P  +   +DI+ +A+ +++ NA  NGV       +SD  ++VE       +++NPP   
Sbjct: 80  NPDREIYMMDINSRAVSLSQKNAQLNGVQ-NVRIFESDGLAAVEPGTKVAAVLTNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--- 233
                                    G        DG    L ++G   + I   Q     
Sbjct: 139 -------------------------GKETIFKFYDGAYELLEENGELWIVIQKKQGAPST 173

Query: 234 --DVVRIF-------ESRKLFLVNAFK 251
              +  +F       + +  +++ A K
Sbjct: 174 MSHLEEMFSEVDVVEKKKGYWIIRAKK 200


>gi|221068627|ref|ZP_03544732.1| methyltransferase small [Comamonas testosteroni KF-1]
 gi|220713650|gb|EED69018.1| methyltransferase small [Comamonas testosteroni KF-1]
          Length = 404

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 64/167 (38%), Gaps = 23/167 (13%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      F P R E   LV      +   I    + +  D+G GTG +  ALL +  
Sbjct: 194 GARIHAHYGVFSPVRGEYLDLV------ARASIPAAGLQQAWDIGVGTGVLS-ALLLKRG 246

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               V  D S +AL  A  N    G + R +  ++D F+  +G   +IV NPP++     
Sbjct: 247 VKSVVATDTSERALACATENLQRLGHASRVELQRADLFA--QGQAGLIVCNPPWLPGKAA 304

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV 225
             L   + D D R+            R    G+S HL     G   +
Sbjct: 305 SVLDQAIYDEDSRM-----------LRGFLQGLSAHLLPGGEGWLIL 340


>gi|47220967|emb|CAF98196.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 196

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 14/178 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVD 128
           D +EP  +T LL+D AL      +++      L++G+G+G V   L     P    +  D
Sbjct: 20  DVYEPAEDTFLLMD-ALEKDAETLQRVSPAVCLEVGSGSGVVSAFLASVIGPSALYLCTD 78

Query: 129 ISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLG 184
           ++  A +     +  N VS +    +L       + G  DV+V NPPY+   S  V   G
Sbjct: 79  LNPAAAQCTAKTSSCNRVSLQPVITSLVDGLLPRLSGKVDVLVFNPPYVVTPSDEVGSRG 138

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFES 241
           +E        +  GG  G          V++ L+ +G   +  I  N   +V  + ++
Sbjct: 139 IEA-------AWAGGRRGREVTDRFLPVVAQLLSTEGSFYLITIAENDPGEVTDVLDA 189


>gi|294634635|ref|ZP_06713169.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
           ATCC 23685]
 gi|291091965|gb|EFE24526.1| ribosomal RNA small subunit methyltransferase [Edwardsiella tarda
           ATCC 23685]
          Length = 373

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W  ++  ++ +      F  R      +D      L  +      R+LD+G G G +  A
Sbjct: 185 WMSYHTGSLHIATLPGVFS-RDG----LDIGSHLLLSSLPHGLKGRVLDVGCGAGVLSAA 239

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + + SP       D++  AL  ++     N +    + + S+ FS ++G FD+I+SNPP+
Sbjct: 240 IARMSPETTLTLCDVNAAALAASRQTLAQNDIPG--EVIASNVFSDIDGRFDLIISNPPF 297

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L   +T+  G   HL   G  
Sbjct: 298 H---------------------DGVQTSLLAAQTLIRGAISHLQLGGEL 325


>gi|156390966|ref|XP_001635540.1| predicted protein [Nematostella vectensis]
 gi|156222635|gb|EDO43477.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             LV  A      +      ++ L++G G GA+ +    + P  +    DI+  A++   
Sbjct: 55  NELVSMARGLLKQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            NA  +GV      +Q+D F   +     FD+I   PP   +   +    +  D   R +
Sbjct: 115 ENARLHGVETSVTAIQADVFDCDDLKGMKFDMIFFRPP---AGFCEGCNEKDLDMSSRTA 171

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            D      S       G    L   G   +
Sbjct: 172 WDPN---YSILERYLKGAREFLGNGGKLLL 198


>gi|210617097|ref|ZP_03291407.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787]
 gi|210149486|gb|EEA80495.1| hypothetical protein CLONEX_03629 [Clostridium nexile DSM 1787]
          Length = 246

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 13/150 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  R+++++    LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  MDAVLLANFARVKQKECA--LDLGTGTGIIPILLTAKTEGMHFTGLEIQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + E+ D +  D   + E      FDVI +NPPY+          + +       L 
Sbjct: 90  AHNHLEEKVDIVTGDIKEAAELFGPASFDVITTNPPYMIGHHGIENPSDAKAIARHEVLC 149

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              D       I    +R L   G   +  
Sbjct: 150 DLND-------ILRESARILKPRGRFYMVH 172


>gi|148244517|ref|YP_001219211.1| hypothetical protein COSY_0362 [Candidatus Vesicomyosocius okutanii
           HA]
 gi|146326344|dbj|BAF61487.1| conserved hypothetical protein [Candidatus Vesicomyosocius okutanii
           HA]
          Length = 195

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ L      F PR      +D      +  ++  +  + LDLG G G + LA+ K  P 
Sbjct: 24  NLTLKTRWGVFSPRS-----IDDGTKLFMKYLKIINDDKCLDLGCGYGPIGLAVAKSCPK 78

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +   VD    A+E++  NA  N + +      SD F SV     FD ++SN P      
Sbjct: 79  TEVHMVDKDFIAVELSNINAKLNRI-DNIQVYLSDAFLSVNKTDYFDQVLSNVP------ 131

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 +V              G      I       L   G  + 
Sbjct: 132 -----AKV--------------GREQLSIILYDAYDVLKPGGKITF 158


>gi|167755129|ref|ZP_02427256.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402]
 gi|237733445|ref|ZP_04563926.1| methyltransferase [Mollicutes bacterium D7]
 gi|167705179|gb|EDS19758.1| hypothetical protein CLORAM_00633 [Clostridium ramosum DSM 1402]
 gi|229383480|gb|EEO33571.1| methyltransferase [Coprobacillus sp. D7]
          Length = 245

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 24/205 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N+++    D F    +T LL +            +DV +I+D GT   A+ L LL + 
Sbjct: 13  YNNMKIIQRKDMFNFSLDTVLLANFCTIT-------KDVKQIIDFGTNNAAIPL-LLSQR 64

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
                 G++I  +A+++A  N   N +  + + + +D    V+      +++ NPP+ + 
Sbjct: 65  TNRPITGIEIQKEAVDLAIKNIELNNLETQINIVHADIAEYVKDAKKVGLVICNPPFFKV 124

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   + +I+L+G          I    +R L+  G  ++    ++ +
Sbjct: 125 DEDSNLNENEYLTIARHEIKINLEG----------IIKSAARILDNKGKFAMVHRPDRMI 174

Query: 234 DVVRIFESRKLFLVNAFKDYGGNDR 258
           D++ + +   +        Y   DR
Sbjct: 175 DILNLMQKYDIEPKRIRFVYPKIDR 199


>gi|296131640|ref|YP_003638887.1| Methyltransferase type 11 [Thermincola sp. JR]
 gi|296030218|gb|ADG80986.1| Methyltransferase type 11 [Thermincola potens JR]
          Length = 253

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 21/188 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++     +F         +D+ L  +   ++K D+  I+DLGTG+G + + L      
Sbjct: 24  DLKIIQRPGSFCFS------IDAVLLANFASVKKGDL--IVDLGTGSGVIPILLTTRQQV 75

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
              +G+DI  +A++ A  +   NG+       + D  ++      G FD++ +NPPY+ +
Sbjct: 76  DHIIGIDIQAEAVDRAVRSVAGNGLQGLITIREGDIRNASAELGLGKFDLVTANPPYLPA 135

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                   +       I+L      L      +    +R LN +G  ++     + VD++
Sbjct: 136 GQGKISPNK------EIALARHE--LCCSMEDVLREGARLLNSNGRLAMVHRPERMVDII 187

Query: 237 RIFESRKL 244
              +   L
Sbjct: 188 FTMKRYGL 195


>gi|255016895|ref|ZP_05289021.1| hypothetical protein LmonF_01871 [Listeria monocytogenes FSL
           F2-515]
          Length = 184

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 27/139 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  + +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N ++      +
Sbjct: 57  ETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAEINKITNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKIVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQK 232
             HL + G   + I   Q 
Sbjct: 151 YDHLQETGELWIVIQKKQG 169


>gi|190346296|gb|EDK38346.2| hypothetical protein PGUG_02444 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 223

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 66  TLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           TL  + +EP  ++ LL+D        L       V  + ++G G+G V   + +    + 
Sbjct: 9   TLDLNVYEPAEDSFLLLDCLEQDQHYLKSHLNTSVPIVSEIGAGSGIVIAFIKRHLYPWG 68

Query: 124 GVG-VDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                D++  A +   +    N  GV   +D  Q D  +++     D++V NPPY+ +  
Sbjct: 69  IYIPTDVNPHACQAVLATLKKNSGGVPSIYDVCQMDCTTAIRSQCLDLLVFNPPYVPAEA 128

Query: 180 VDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVV 236
           V        D +  +  +L GG DG+     +   +S  L  +G+  +     N+  +V 
Sbjct: 129 VPA-TPNTLDDETWLDLALLGGDDGMEVTWRVLKNLSSILAPNGIAYILFCARNKPKEVC 187

Query: 237 RIFESRKLFLVNAF 250
               S+        
Sbjct: 188 LYMRSQGWLAEEVI 201


>gi|289423905|ref|ZP_06425698.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
           anaerobius 653-L]
 gi|289155682|gb|EFD04354.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
           anaerobius 653-L]
          Length = 314

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 51/217 (23%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL------VDSALAFSLPRIEK--------------R 96
           W+ +Y   L       +P  E   +      V+     +                    +
Sbjct: 117 WKKYYKPTLIGDRIVIKPEWEDYEVKNQEIVVELNPGMAFGTGNHETTSMCIENLEKYVK 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+G G+G + +    +    + +G+DI   A+++AK N   N V      ++ +
Sbjct: 177 EDSVVFDIGCGSGILGI-CAAKLGAKEVIGIDIDEVAVKVAKENIDKNHVGSNMTAIKGN 235

Query: 157 WFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               ++     DV+V+N   I + IV  L  +VR F                        
Sbjct: 236 LADDIDPSKKADVVVAN---IMADIVMFLTKDVRSF-------------------LKDSG 273

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           + ++   +       ++  +VV   E      +   K
Sbjct: 274 KFISSGIIL------DKVDEVVACLEENGFKDIQVNK 304


>gi|229824583|ref|ZP_04450652.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271]
 gi|229785954|gb|EEP22068.1| hypothetical protein GCWU000282_01927 [Catonella morbi ATCC 51271]
          Length = 203

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 66/191 (34%), Gaps = 33/191 (17%)

Query: 63  VRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +     +  F  +     +++LV+ A A ++P    +    I++LG+G G V +AL K  
Sbjct: 28  LSFQTDNGVFSKQRMDYGSKVLVE-AFADAVPVGSYQ----IVELGSGYGPVTIALAKLY 82

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +  GV+I+ +A ++A++N+  N V      L            D +V+NPP      
Sbjct: 83  PQAQVTGVEINERAYQLAQANSQLNRVENTAYQLADAGQWQASQAPDFVVTNPPIRA--- 139

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                                 G    +        +L   G   + I   Q    +  F
Sbjct: 140 ----------------------GKQVIQQFVRSAQANLRPGGELWLVIQKKQGAPSMETF 177

Query: 240 ESRKLFLVNAF 250
                  V   
Sbjct: 178 MEEVFGNVELV 188


>gi|220913891|ref|YP_002489200.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
 gi|219860769|gb|ACL41111.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
          Length = 549

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 58/176 (32%), Gaps = 24/176 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L         R +  L +  A    +    +R   R LDLGTG G     LL       
Sbjct: 152 DLAAHQQAGVLRHDHVLGIGQASTTLVQTTVRRHTERALDLGTGCGIQSFHLLHHCE--H 209

Query: 124 GVGVDISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
               DIS +AL   + N + N          +++R           V G  F ++VSNPP
Sbjct: 210 VTATDISERALAFTRFNILLNAEALSVDPGRLADRVSLRLGSLLEPVAGEEFGLVVSNPP 269

Query: 174 YI----ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++     +          R        DGG+ G     ++   +   L   G   +
Sbjct: 270 FVITPRSTGEDAADQFTYR--------DGGLPGDDIVASLVADLPTVLAPGGTAQM 317


>gi|134283177|ref|ZP_01769878.1| putative methyltransferase [Burkholderia pseudomallei 305]
 gi|134245372|gb|EBA45465.1| putative methyltransferase [Burkholderia pseudomallei 305]
          Length = 378

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 29/183 (15%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
             K   I  + G R        +              V       LP           ++
Sbjct: 159 RKKGVPIAALGGER--------IHPHYGVFSSVRGEYVALVARAPLPSTS-----LAFEI 205

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G GTG +  A+L      + V  D   +AL  A  N    G + + + +++D F   +G 
Sbjct: 206 GVGTGVLA-AVLASRGVGRIVATDQDKRALACAAENVARLGYARQIEIVEADLFP--DGR 262

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GL 222
             +IV NPP++ +     L   V D D R+            +    G++ HL     G 
Sbjct: 263 APLIVCNPPWVPARPSSPLEYAVYDPDSRM-----------LKGFLAGLAAHLAPGGEGW 311

Query: 223 CSV 225
             +
Sbjct: 312 LIL 314


>gi|84393956|ref|ZP_00992696.1| hypothetical protein V12B01_08642 [Vibrio splendidus 12B01]
 gi|84375400|gb|EAP92307.1| hypothetical protein V12B01_08642 [Vibrio splendidus 12B01]
          Length = 242

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 10/158 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            +       +LD+GTGTG + L   +         +DI   A++ A  N   +   +R  
Sbjct: 37  WVSLPQRSCVLDIGTGTGLLALMAAQRFEDASISAIDIDQHAIDAATVNIEQSPWQDRIS 96

Query: 152 TLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                   +     FD I+ NPPY  S                 +     + L H   +A
Sbjct: 97  LHHGSVLTTDFSQRFDAIICNPPYFNSGEQAQQSQ--------RATARHTNSLDHLE-LA 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                        S  +   +    +++ +    +L  
Sbjct: 148 QRCFEITTDAATASFILPTTEGEGFIKLAQQCGWYLAK 185


>gi|260598958|ref|YP_003211529.1| hypothetical protein CTU_31660 [Cronobacter turicensis z3032]
 gi|260218135|emb|CBA32941.1| Uncharacterized protein yfiC [Cronobacter turicensis z3032]
          Length = 256

 Score = 81.3 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G G+G + L L + +        V++  +A E A+ N   +  + R 
Sbjct: 50  WAPVAKAQRVLDIGAGSGLLALMLAQRTDDTVTLDAVELDSQAAEQARENVAASPWAARI 109

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D   W       +++IVSNPPY +  +       E   +    +LD G       
Sbjct: 110 QVHDADIQAWAQQQTQRYELIVSNPPYYDKGVACATPAREQARY--TTTLDHGA------ 161

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +    ++ + ++G   V +  +      R+   +   L     D   N+     RVLL
Sbjct: 162 --LLACAAQLITEEGFFCVVLPESSGEGFSRLAGEQGWHL-RLRTDVAENEGKLPHRVLL 218

Query: 262 F 262
            
Sbjct: 219 A 219


>gi|326509621|dbj|BAJ87026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 236

 Score = 80.9 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 53/117 (45%), Gaps = 10/117 (8%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA 87
           + LD+ +  +L +   R         ++G   + ++ + +      PRPETE +VD    
Sbjct: 125 APLDELEALWLRHVRDRR----PFQYVVGNEHWKDLVVAVRDGVLIPRPETEAVVDMV-- 178

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVT 143
                +E        DLGTG+GA+ +A+ +   P  +    D+S  A+E+A+ N   
Sbjct: 179 ---GAVEGFQDGWWADLGTGSGAIAVAVARMLGPAGRVFATDVSEVAVEVARLNVHR 232


>gi|205372078|ref|ZP_03224895.1| 16S rRNA m(2)G 1207 methyltransferase [Bacillus coahuilensis m4-4]
          Length = 200

 Score = 80.9 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 71/207 (34%), Gaps = 49/207 (23%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++         F        +  L++    F LP ++       LD+G G G + L+L K
Sbjct: 26  HSFTFKTDQGVFSKSEIDFGSRTLLE---CFKLPAVDGP----FLDVGCGYGPIGLSLAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIE 176
           E    +   VD++ +AL +A+ NAV N V       +SD   SV E  F  I++NPP   
Sbjct: 79  EDENRQVHMVDVNERALSLAEENAVLNNVQ-NVSIYRSDTLHSVKEESFAAILTNPPIRA 137

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--- 233
                                    G      I +     L   G   V I   Q     
Sbjct: 138 -------------------------GKKVVHDIFEQSFHKLRNGGELWVVIQKKQGAPSA 172

Query: 234 --DVVRIF-------ESRKLFLVNAFK 251
              +  +F       + +  +++ A K
Sbjct: 173 MDKLEELFGEVEVVGKEKGYYILKAQK 199


>gi|254415542|ref|ZP_05029302.1| Methyltransferase small domain superfamily [Microcoleus
           chthonoplastes PCC 7420]
 gi|196177723|gb|EDX72727.1| Methyltransferase small domain superfamily [Microcoleus
           chthonoplastes PCC 7420]
          Length = 217

 Score = 80.9 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 15/138 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +   V  ILD+GTGTG V L L + S       V+I  +A   A+ N   +   +R  
Sbjct: 13  WTDITGVQSILDIGTGTGLVALMLAQRS-QAHIDAVEIDAEAGIQARENVAKSPWRDRIQ 71

Query: 152 TLQS---DWFSSVEGLFDVIVSNPPYIESVIVDCL-GLEVRDFDPRISLDGGIDGLSHYR 207
             Q    D+ ++    +D+IVSNPP+ ++          V             D L    
Sbjct: 72  VYQGSVQDYATTCSKRYDLIVSNPPFFDNASKALQKARTVARH---------SDSLRQLD 122

Query: 208 TIADGVSRHLNKDGLCSV 225
            +     + L++ G  +V
Sbjct: 123 -LLQVAEQLLSEKGRLAV 139


>gi|313815328|gb|EFS53042.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA1]
 gi|315099509|gb|EFT71485.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA2]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|293374642|ref|ZP_06620957.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325845438|ref|ZP_08168731.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
 gi|292646732|gb|EFF64727.1| methyltransferase small domain protein [Turicibacter sanguinis
           PC909]
 gi|325488544|gb|EGC90960.1| methyltransferase small domain protein [Turicibacter sp. HGF1]
          Length = 254

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 26/192 (13%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  +++  + + F    ++ LL D       P I  + V  I+DL TG   V L L   S
Sbjct: 17  YDGLKIIQNPEMFNFSLDSTLLGD------YPTI-NKGVKSIVDLCTGNAPVPLFLSLRS 69

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
                 GV+I   + ++A  N   NG+ +R   ++ D     E L     DV+  NPPY 
Sbjct: 70  K-AHITGVEIQDMSYDLATRNVAVNGLEDRITIVKGDLKGIHEQLGKYAHDVVTCNPPYF 128

Query: 176 ESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           +      L       +   +   +LD           +    S  L   G  ++    ++
Sbjct: 129 KVNPDSNLNKNDYLTIARHEVLATLD----------DVVKEASLLLKHGGRFAMVHRPDR 178

Query: 232 KVDVVRIFESRK 243
            VD++  F   K
Sbjct: 179 LVDIIETFRKYK 190


>gi|312135346|ref|YP_004002684.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           owensensis OL]
 gi|311775397|gb|ADQ04884.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           owensensis OL]
          Length = 306

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 84/219 (38%), Gaps = 60/219 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRP------ETELLVD--------------SALAFSLPRIEKR 96
           W+ +Y   + +      P        +++ +V               +AL     +   +
Sbjct: 109 WKKYYK-PVEIGDIVIVPSWEDYKAEDSKTIVRLDPGMAFGTGTHESTALCLEAIQKYVK 167

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD+GTG+G + +A  K+    + + VDI   A+++A  NA  NGV    +  +++
Sbjct: 168 PGMDVLDVGTGSGILAIA-AKKLLASRVLAVDIDEVAVKVAMENAKLNGVE--IEIKKNN 224

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +E  FD++V+N                      ++             ++  V+R 
Sbjct: 225 LVEGIEEKFDIVVAN---------------------IVA--------DIIIRLSTDVNRV 255

Query: 217 LNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   G+      +E   ++  DV++ FE   L +V   K
Sbjct: 256 LKDSGIFISSGIIE---DRLEDVLKSFEKNSLEIVEVKK 291


>gi|289450687|ref|YP_003475049.1| methyltransferase small domain-containing protein [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185234|gb|ADC91659.1| methyltransferase small domain protein [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 212

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 32/176 (18%)

Query: 64  RLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES 119
           RL   +  F  R     T + ++  L  +  R E   V  R LDLG G G + + L    
Sbjct: 28  RLWSDNGVFAKRGLDIGTSVFLECLLKKAELRSELESVKGRALDLGCGIGIIAIVLQGYL 87

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
           P  K   VDI+ +A+ +AK N   +G+        SD FS++ E  F +IVSNPP     
Sbjct: 88  PQLKFSAVDINERAVSLAKRNVQASGLDIPVHV--SDGFSALKEEEFSLIVSNPPIRIGK 145

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                                      YR IAD    HL   GL  + +G  Q  +
Sbjct: 146 QP------------------------LYRLIAD-AYAHLAPCGLMFLVVGKKQGAE 176


>gi|257866503|ref|ZP_05646156.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257872981|ref|ZP_05652634.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257876107|ref|ZP_05655760.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC20]
 gi|257800461|gb|EEV29489.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC30]
 gi|257807145|gb|EEV35967.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC10]
 gi|257810273|gb|EEV39093.1| rRNA small subunit methyltransferase C [Enterococcus casseliflavus
           EC20]
          Length = 201

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 41/206 (19%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +         +D+     +T       L  +    E  +   +LD+G G G V LAL   
Sbjct: 22  ELRGKNFHFVTDSGVFSRDTVDYGSRVLIDAFEWGELPEG-SLLDVGCGYGPVGLALAYA 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           S       +DI+ +A+++AK NA  NG+ E+ D  QS+ ++ +    +  I+SNPP    
Sbjct: 81  SQRP-VEMIDINQRAVDLAKGNAQRNGI-EQVDIHQSNIYAQLNQPAYAAILSNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---- 233
                                   G      I  G    L   G  ++ I   Q      
Sbjct: 138 ------------------------GKEVVHEILTGAFPLLKAGGTLTIVIQKKQGAPSAQ 173

Query: 234 -DVVRIF-------ESRKLFLVNAFK 251
             +   F       + +  +++ + K
Sbjct: 174 KKMQETFGNAEIIKKDKGYYIIQSVK 199


>gi|327334815|gb|EGE76526.1| putative transferase [Propionibacterium acnes HL097PA1]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|313765304|gb|EFS36668.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA1]
 gi|314916043|gb|EFS79874.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA4]
 gi|314917195|gb|EFS81026.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA1]
 gi|314921694|gb|EFS85525.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA3]
 gi|314931099|gb|EFS94930.1| methyltransferase small domain protein [Propionibacterium acnes
           HL067PA1]
 gi|314955032|gb|EFS99438.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA1]
 gi|314959071|gb|EFT03173.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA1]
 gi|314969708|gb|EFT13806.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA1]
 gi|315101984|gb|EFT73960.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA1]
 gi|315110093|gb|EFT82069.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA2]
 gi|327454510|gb|EGF01165.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA3]
 gi|327456580|gb|EGF03235.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA2]
 gi|328755561|gb|EGF69177.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA1]
 gi|328756890|gb|EGF70506.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA2]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|295129808|ref|YP_003580471.1| methyltransferase, HemK family [Propionibacterium acnes SK137]
 gi|291375527|gb|ADD99381.1| methyltransferase, HemK family [Propionibacterium acnes SK137]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|170767237|ref|ZP_02901690.1| putative methyltransferase [Escherichia albertii TW07627]
 gi|170123571|gb|EDS92502.1| putative methyltransferase [Escherichia albertii TW07627]
          Length = 245

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+GTG+G + L L + +        V++  +A   A+ N   +  + R 
Sbjct: 39  WAPVAGVKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELDSEAATQAQENVAQSPWAHRV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W S     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWISRQTTRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++ +  +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 QSLLNCAAECMTEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|224038935|gb|ACN38364.1| putative sisomicin methyltransferase [Micromonospora inyonensis]
          Length = 320

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 26/158 (16%)

Query: 67  LSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +    +  P  E +LL+   L        +R   R LD+G G+G + L L         +
Sbjct: 100 VQHRWYVDPLWEADLLIRLML--------RRGGARALDMGCGSGVLSLVLADRYE--SVL 149

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           GVD++ +A+ +++ NA  NG++      + D F   EG F  IV N P   +        
Sbjct: 150 GVDVNPRAVALSRLNAALNGLT-NVTFREGDMFEPAEGRFSRIVFNSP--TNEEGSEFVD 206

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +   +P               T    V R L   G+ 
Sbjct: 207 LLEAGEP------------ILETFFRDVPRKLESGGVV 232


>gi|212375063|pdb|3EVZ|A Chain A, Crystal Strucure Of Methyltransferase From Pyrococcus
           Furiosus
          Length = 230

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R     L++GTG  A      ++    K    ++  +  E A+ N   N  + R      
Sbjct: 54  RGGEVALEIGTGHTAXXALXAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG 113

Query: 156 DWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                 VEG FDVI S PPY +  +   L         R ++ GG  G      + +   
Sbjct: 114 GIIKGVVEGTFDVIFSAPPYYDKPLGRVLTE-------REAIGGGKYGEEFSVKLLEEAF 166

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            HLN  G  ++ +    K  ++ + + R + L  + KD 
Sbjct: 167 DHLNPGGKVALYLPD--KEKLLNVIKERGIKLGYSVKDI 203


>gi|223939007|ref|ZP_03630892.1| methyltransferase small [bacterium Ellin514]
 gi|223892303|gb|EEF58779.1| methyltransferase small [bacterium Ellin514]
          Length = 288

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 64/176 (36%), Gaps = 17/176 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L             + LDLG+G G+V +      P  + V ++   +++ +A+ +A 
Sbjct: 63  DDVLTAWYGTSWCPTACKALDLGSGIGSVGMIAAWRLPGAQFVTIEAQDESVRLARKSAR 122

Query: 143 TNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRIS 195
            NG+  R++    D+        + LFD+++ +PPY      +  D        F+ R  
Sbjct: 123 FNGLEARYEIRHGDFRDPNILRDDELFDLVLGSPPYFPLGSGIEGDHPQKIACRFEVR-- 180

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                             ++HL   G  +      Q   V    ++ +L +V    
Sbjct: 181 --------GDISHYCAMATKHLAPGGFFACVFPTEQLERVEAAAKNAELTIVRRRP 228


>gi|313772780|gb|EFS38746.1| methyltransferase small domain protein [Propionibacterium acnes
           HL074PA1]
 gi|313810920|gb|EFS48634.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA1]
 gi|313831685|gb|EFS69399.1| methyltransferase small domain protein [Propionibacterium acnes
           HL007PA1]
 gi|313834433|gb|EFS72147.1| methyltransferase small domain protein [Propionibacterium acnes
           HL056PA1]
 gi|314974774|gb|EFT18869.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA1]
 gi|314977026|gb|EFT21121.1| methyltransferase small domain protein [Propionibacterium acnes
           HL045PA1]
 gi|314985487|gb|EFT29579.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA1]
 gi|315097322|gb|EFT69298.1| methyltransferase small domain protein [Propionibacterium acnes
           HL038PA1]
 gi|327331308|gb|EGE73047.1| putative transferase [Propionibacterium acnes HL096PA2]
 gi|327447313|gb|EGE93967.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA1]
 gi|327450241|gb|EGE96895.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA2]
 gi|328761121|gb|EGF74665.1| putative transferase [Propionibacterium acnes HL099PA1]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|307566089|ref|ZP_07628547.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A]
 gi|307345277|gb|EFN90656.1| methyltransferase domain protein [Prevotella amnii CRIS 21A-A]
          Length = 234

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 14/161 (8%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-- 152
            +    ILD+GTGTG + L + +  P  K  G+DI   AL+ A  N  ++  ++R     
Sbjct: 30  GKGGENILDVGTGTGLIALMMAQRFPHSKVTGIDIDENALKDAVQNIKSSKFNDRIRIEP 89

Query: 153 --LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             LQ D   +    FD IV NPP+  + +        +              LS Y  + 
Sbjct: 90  ISLQ-DLCKTQNNTFDAIVCNPPFFINSLKSVSESRTK--------ARHTVSLS-YTELM 139

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               + L +DG  SV I  +    +          L    K
Sbjct: 140 HCTKKLLKEDGTLSVIIPMDNVPILKTEAIFTGFQLEELVK 180


>gi|313840376|gb|EFS78090.1| methyltransferase small domain protein [Propionibacterium acnes
           HL086PA1]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|258511961|ref|YP_003185395.1| 50S ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478687|gb|ACV59006.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 316

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 40/164 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R++D+GTGTG + +A        + V +D+   A+  A  N  TNG+ +R D  Q 
Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE-RVVAIDLDPVAVSAATDNVRTNGLEDRVDVRQG 234

Query: 156 DWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           D  +++  +  FD+ V+N   I   +V  L  +VR   PR                    
Sbjct: 235 DLLAALRPDETFDLAVAN---ILRDVVIALVPQVR---PR-------------------- 268

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLV-NAFKD 252
              L   G       +E   +Q+  V +        +V  A +D
Sbjct: 269 ---LVPGGWLLTSGYIE---SQREQVEQALADHGFSVVRRAHQD 306


>gi|294815596|ref|ZP_06774239.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|326443946|ref|ZP_08218680.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|294328195|gb|EFG09838.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
          Length = 239

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 14/146 (9%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A       +   +    L++G GTG + +     S       +DI+ KA+    +NA  
Sbjct: 57  AATEVLASMVPYPEGGSFLEVGCGTGVIAVTAAL-SGCTSVTALDINEKAIANTVANAER 115

Query: 144 NGVSERFDTLQSDWFSSVE--GLFDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGG 199
           +GVS+R   L SD ++++     FD I  N P  Y+E        L    FDP       
Sbjct: 116 HGVSDRVRALHSDMYTALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------- 168

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
             G         G   HL   G   +
Sbjct: 169 --GYRGQARYLAGAHEHLADGGRLLL 192


>gi|325969180|ref|YP_004245372.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
 gi|323708383|gb|ADY01870.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
          Length = 200

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 18/160 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++ + S+ + P  ++    +  L + +        +RI+D+G+GTG + L  L E    
Sbjct: 3   MKIIVLSNVYPPAEDSWQTAEL-LRWVMSNHANDGYLRIIDVGSGTGILALTALNEIVSK 61

Query: 123 KGVGVDISCK----ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPYIE 176
            G    ++      A    + N V NG+    D +  +   ++   F  D++VSNPPY+ 
Sbjct: 62  GGTAWVLAADHDYNASMNTRINLVNNGLYHYADVITMNLLDAIRTRFCLDIVVSNPPYLP 121

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +              + GG  G    + +   + ++
Sbjct: 122 GNWNEDWR-----------IFGGSHGNDVIKQLIQQICQY 150


>gi|116670026|ref|YP_830959.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116610135|gb|ABK02859.1| 16S rRNA m(2)G 1207 methyltransferase [Arthrobacter sp. FB24]
          Length = 204

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 12/157 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPF 121
            RL  S   F P       +D   A  L  +        +LD+G G G + L +   +P 
Sbjct: 29  RRLQTSGGIFSPDG-----IDKGTAVLLADVPAPSPQGNLLDIGCGWGPIALTMALRAPH 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ + + +   NA   G++    +L  D    +   FD I SNPP    +  D
Sbjct: 84  SHVYAVDVNERCVALTNENAGLLGLNNVTASLPDDVDPGL--RFDTIWSNPPI--RIGKD 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHL 217
            L   +  + PR++  GG   L   + + +D + R L
Sbjct: 140 ELHSMLLLWLPRLAP-GGSAWLVVQKNLGSDSLQRWL 175


>gi|289422828|ref|ZP_06424661.1| methyltransferase small [Peptostreptococcus anaerobius 653-L]
 gi|289156738|gb|EFD05370.1| methyltransferase small [Peptostreptococcus anaerobius 653-L]
          Length = 249

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 26/171 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL  + D F         +D+ L  +  ++++    +++DLGTGTG + + +  +S  
Sbjct: 18  GLRLIQNPDGFCFG------IDAVLLANFSKVKRGS--KVVDLGTGTGIIPVLISGKSRA 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYIES 177
            K +GV+I  +  E+A  +   N + +R   L  D    +S+ G    DV+VSNPPY+ S
Sbjct: 70  DKIIGVEIQEEVAEMATRSVKLNDLEDRVIILNEDLNNITSLIGKNTVDVVVSNPPYMHS 129

Query: 178 VIV--DCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHLNKDGLCSV 225
             +  +     +              G +     I       L  +G   +
Sbjct: 130 KGIINENDKKAISRH-----------GIMCDLEDIFRVAKDILKPNGKLYM 169


>gi|50841731|ref|YP_054958.1| putative transferase [Propionibacterium acnes KPA171202]
 gi|289424689|ref|ZP_06426472.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|50839333|gb|AAT82000.1| putative transferase [Propionibacterium acnes KPA171202]
 gi|289155386|gb|EFD04068.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|313793197|gb|EFS41264.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA1]
 gi|313802714|gb|EFS43932.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA2]
 gi|313814581|gb|EFS52295.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA1]
 gi|314964609|gb|EFT08709.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA1]
 gi|315078373|gb|EFT50404.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA2]
 gi|315082159|gb|EFT54135.1| methyltransferase small domain protein [Propionibacterium acnes
           HL078PA1]
 gi|315106317|gb|EFT78293.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA1]
 gi|327457146|gb|EGF03801.1| methyltransferase small domain protein [Propionibacterium acnes
           HL092PA1]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|312884017|ref|ZP_07743734.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368475|gb|EFP96010.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 235

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 18/193 (9%)

Query: 55  LGWRDFYNVRLTLSSDT-FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +  +DF   +  +       P     +L              + +  ILD+GTGTG + L
Sbjct: 2   IKTKDFQFKQFIVRGGYSGMPVSTDGVL-------LGAWAPVKGINSILDIGTGTGLLSL 54

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNP 172
              + +       +DI   A + A+ N  ++    R     ++  +      FD I+ NP
Sbjct: 55  MCAQRNHELIIDAIDIDENAFQAAQINIASSPWKNRITLHHANILTHHFNKQFDAIICNP 114

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           PY  +              P  +       L H  ++       L+  G         + 
Sbjct: 115 PYFNTGPHSNT--------PSRAKARHTTSLDHS-SLLRRCQSLLSSSGKAHFIFPLTEG 165

Query: 233 VDVVRIFESRKLF 245
            + + +      F
Sbjct: 166 HEFLDLINQNNWF 178


>gi|54026829|ref|YP_121071.1| putative methyltransferase [Nocardia farcinica IFM 10152]
 gi|54018337|dbj|BAD59707.1| putative methyltransferase [Nocardia farcinica IFM 10152]
          Length = 218

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 70/185 (37%), Gaps = 16/185 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL  +   + P+ +T       LA +          R+LD  TGT         E+   
Sbjct: 1   MRLLRAPGVYRPQTDTR-----LLAEAATAATLPQRPRVLDPCTGT-GALAIAAAEAGAE 54

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD 181
               VD+S +A+  A  N+   G+    + L+ D+ + + E  FDV+++NPPY+      
Sbjct: 55  SVTAVDLSRRAVATAWLNSRLRGL--HIELLRGDFAAVLGERTFDVVLANPPYVPCADPH 112

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV-RIFE 240
                 R      + D G DG +    + D + R L   G+  +        +   R   
Sbjct: 113 PARGADR------AWDAGHDGRAVLDRLCDQLPRLLAPRGVALIVHSELCGEETSLRRLR 166

Query: 241 SRKLF 245
              L 
Sbjct: 167 DNGLK 171


>gi|297560902|ref|YP_003679876.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845350|gb|ADH67370.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 223

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 31/136 (22%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++RL      F P      T +L++S            +  R+LDLG G G + L +   
Sbjct: 27  HLRLRTDRGVFSPDKVDLGTRVLLESV-------PPPPEGGRLLDLGCGYGPIALTMASR 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE--------------- 162
           +P  + +GVD++ +A+ +A+ NA  +G+   RF  ++ +   SVE               
Sbjct: 80  APGARVLGVDVNARAVGLARRNAAEHGLDNARFAVVEPEGGLSVERGASGEGAPARDDVT 139

Query: 163 -----GLFDVIVSNPP 173
                G FD + SNPP
Sbjct: 140 AQDLLGPFDAVWSNPP 155


>gi|304415329|ref|ZP_07396010.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1]
 gi|304282816|gb|EFL91298.1| 16S rRNA m2G1207 methylase [Candidatus Regiella insecticola LSR1]
          Length = 250

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 31/170 (18%)

Query: 57  WRDFYNVR---LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W   Y+V    +      F  R      +D      L    ++   ++LD+  GTG +  
Sbjct: 61  WWGHYHVDTRIIKTLPGVFS-RDG----LDPGSQLLLSSFTEQVKGKVLDIACGTGVLAC 115

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L   SP  K    D+S  ALE +++    N +    + + S+ +S ++G FD+I++NPP
Sbjct: 116 VLAHHSPQIKLTLSDVSAAALEASRATLAINNIDA--EVIASNLYSDIKGRFDLIMANPP 173

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           + + + +                      L     +  G   HL   G  
Sbjct: 174 FHDGLAIS---------------------LHIAERLICGAYDHLRIGGKL 202


>gi|313828766|gb|EFS66480.1| methyltransferase small domain protein [Propionibacterium acnes
           HL063PA2]
          Length = 505

 Score = 80.9 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+I++NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIITNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|182437096|ref|YP_001824815.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465612|dbj|BAG20132.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 527

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+GTG+G   L   + +   +    D++ +ALE  +     +G +   D  +
Sbjct: 175 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 231

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP++ S                   DGG+ G    R +    
Sbjct: 232 GSLFEPVGSDTFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRALVQQS 280

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
             HLN+ G       +    
Sbjct: 281 GAHLNEGGYAQFLANWQHVE 300


>gi|221640206|ref|YP_002526468.1| methyltransferase small [Rhodobacter sphaeroides KD131]
 gi|221160987|gb|ACM01967.1| Methyltransferase small [Rhodobacter sphaeroides KD131]
          Length = 253

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 71/195 (36%), Gaps = 27/195 (13%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT      +PR       D  L      +       +L+LG G G   L L    
Sbjct: 12  FLGGRLT----VLQPRRGYRAATDPVL--LAAAVPASAGQSVLELGCGAGVASLCLAARV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +  G+++      +A+ NA  NGV+   + ++ D     + +   FD +++NPPY  
Sbjct: 66  PGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAMPAVLRRSFDHVIANPPYYP 123

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               +   D         +  ++L              +   R L   G+ S+  G ++ 
Sbjct: 124 AGGGTGAADPGRERAMREETPLALW------------IEAAVRRLAPRGVLSLIFGADRL 171

Query: 233 VDVVRIFESRKLFLV 247
            D +   + R+   V
Sbjct: 172 PDALAALDGRRGSSV 186


>gi|332879238|ref|ZP_08446935.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332682658|gb|EGJ55558.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 236

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D   ILD+GTG+G + + L ++      +G+DI  +A+  A  N      S+R     
Sbjct: 36  CPDSKYILDIGTGSGLIAIMLAQKC-NAYIIGIDIDEEAVNQATDNGKKTPWSQRLHFEV 94

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +  + +     D+I  NPP+  + +      E R++          D L     +    
Sbjct: 95  ENALTYIPQKKLDLITCNPPFFTNSL--QCPGEKRNYARHS------DALPF-DALIANA 145

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              LN     +V +  +     +++   R L
Sbjct: 146 YTWLNDGACFNVVLPASSADAFIQMAWERGL 176


>gi|314965420|gb|EFT09519.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA2]
 gi|315104888|gb|EFT76864.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA2]
 gi|327329215|gb|EGE70975.1| putative transferase [Propionibacterium acnes HL103PA1]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|314922383|gb|EFS86214.1| methyltransferase small domain protein [Propionibacterium acnes
           HL001PA1]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|319790287|ref|YP_004151920.1| methyltransferase small [Thermovibrio ammonificans HB-1]
 gi|317114789|gb|ADU97279.1| methyltransferase small [Thermovibrio ammonificans HB-1]
          Length = 249

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 26/189 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R    +D F    +T LL D          + +   R+ DLGTG G + + LL + P  +
Sbjct: 16  RFYQRTDGFRFGTDTFLLTDFV--------KLKGKERLADLGTGCGVIPILLLLKHPKVE 67

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE--- 176
            VG+D+  + +++A  NA  N V+ERF  +  +     E      FDV+VSNPP+IE   
Sbjct: 68  AVGIDVLEENVKLALKNAELNKVAERFQAVTLNVTQVKEHFRPSSFDVVVSNPPFIEVGR 127

Query: 177 -SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            S     +   V   + +  L                 S  L   G   + +   +  D 
Sbjct: 128 GSTSTRSMHRAVARQELKAKL----------EDFIKAASYLLKDRGRFFLLLPTVRFTDA 177

Query: 236 VRIFESRKL 244
           V +  + KL
Sbjct: 178 VELLRANKL 186


>gi|269114910|ref|YP_003302673.1| DNA methylase [Mycoplasma hominis]
 gi|268322535|emb|CAX37270.1| DNA methylase [Mycoplasma hominis ATCC 23114]
          Length = 260

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 73/179 (40%), Gaps = 27/179 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   I  R V  IL++GT  GA+ + +           ++I  KA+E+A+ N 
Sbjct: 29  VDTILLGNFVSI-NRKVRNILEVGTNNGALSIFIAARDKRLNIDAIEIQSKAVELARKNI 87

Query: 142 VTNGVSERFDTLQSDWF-----------SSVEGLFDVIVSNPPYIESVIVD-----CLGL 185
           + N +  + + ++ D+            + +   +D+IV+NPPY             L  
Sbjct: 88  ILNKLENQINLIEGDFRMWANQKAYDCGNKLAKKYDLIVANPPYYNEDYNQQRKNSTLEQ 147

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++   +  ++L            +    +R + + G  ++ +   + +D++ +      
Sbjct: 148 KLATHEINLNL----------EQLVANSARIIEQKGYLAIVLPMARYIDLICLLRKYNF 196


>gi|256828516|ref|YP_003157244.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028]
 gi|256577692|gb|ACU88828.1| methyltransferase small [Desulfomicrobium baculatum DSM 4028]
          Length = 268

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 16/172 (9%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL  +     ++   R+LDLGTG G V L L  + P F G+G+D++   L  A+ NA   
Sbjct: 30  ALLLAAFAGREQVRGRVLDLGTGCGVVGLGLALDHPDFFGIGLDLNPDMLCHARENACRL 89

Query: 145 GVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDG 198
           G +ERF  L++D            D+++SNPPY +           R    F+ R     
Sbjct: 90  GFAERFALLRADACGPWGFAPESMDLVLSNPPYRDPGRGRICPDAARTLARFERR----- 144

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                +  +      +  L     C       +  +++ +  + +L      
Sbjct: 145 -----AELKDFVRAAAYLLRNRKSCVFIHLAERVDELLDLLRASRLQPKEVL 191


>gi|315094236|gb|EFT66212.1| methyltransferase small domain protein [Propionibacterium acnes
           HL060PA1]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|289428864|ref|ZP_06430544.1| methyltransferase, HemK family [Propionibacterium acnes J165]
 gi|289157865|gb|EFD06088.1| methyltransferase, HemK family [Propionibacterium acnes J165]
 gi|313806372|gb|EFS44879.1| methyltransferase, HemK family [Propionibacterium acnes HL087PA2]
 gi|313822013|gb|EFS59727.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA1]
 gi|313824091|gb|EFS61805.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA2]
 gi|313826458|gb|EFS64172.1| methyltransferase, HemK family [Propionibacterium acnes HL063PA1]
 gi|314926590|gb|EFS90421.1| methyltransferase, HemK family [Propionibacterium acnes HL036PA3]
 gi|314961345|gb|EFT05446.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA2]
 gi|314980311|gb|EFT24405.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA2]
 gi|314987396|gb|EFT31487.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA2]
 gi|314989063|gb|EFT33154.1| methyltransferase, HemK family [Propionibacterium acnes HL005PA3]
 gi|315082698|gb|EFT54674.1| methyltransferase, HemK family [Propionibacterium acnes HL027PA2]
 gi|315086057|gb|EFT58033.1| methyltransferase, HemK family [Propionibacterium acnes HL002PA3]
 gi|315087642|gb|EFT59618.1| methyltransferase, HemK family [Propionibacterium acnes HL072PA1]
 gi|327333296|gb|EGE75016.1| putative transferase [Propionibacterium acnes HL096PA3]
 gi|327445227|gb|EGE91881.1| methyltransferase, HemK family [Propionibacterium acnes HL013PA2]
 gi|332674647|gb|AEE71463.1| putative transferase [Propionibacterium acnes 266]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|14591412|ref|NP_143492.1| hypothetical protein PH1642 [Pyrococcus horikoshii OT3]
 gi|3258071|dbj|BAA30754.1| 198aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 198

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 75/212 (35%), Gaps = 58/212 (27%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y  +   +S  F        TELL+ + +         +   ++LDLG G G + + +  
Sbjct: 28  YCFKFITASGVFSFGKLDRGTELLIKNMIL--------KPGWKVLDLGCGYGPIGI-VAS 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIE 176
               +  V  DI+ +A+ IA+ N   N VS   +    + +  VEG  F+ I++NPP   
Sbjct: 79  RFVEY-VVMTDINKRAVTIARKNMKLNNVS-NGEVRLGNLYEPVEGEKFNSIITNPPVHA 136

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----------- 225
                                    G    R I      +L+ DG+  +           
Sbjct: 137 -------------------------GKDVLREIVINAPNYLHDDGMLQLVIKTRLGAKFI 171

Query: 226 -EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
            E+  +   +VV + +         ++ Y G 
Sbjct: 172 KELMQDTFTEVVELAKGSG------YRVYAGI 197


>gi|238752630|ref|ZP_04614102.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei
           ATCC 43380]
 gi|238709144|gb|EEQ01390.1| Ribosomal RNA small subunit methyltransferase C [Yersinia rohdei
           ATCC 43380]
          Length = 347

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQIGDVTVKTLPGVF---SRDSL--DSGSHLLLSTFSEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  ALE +++    N +      + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLCDVSAAALEASRATLAANNIEAPV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGMQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|85814038|emb|CAF31454.1| putative gentamicin methyltransferase [Micromonospora echinospora]
          Length = 321

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 26/163 (15%)

Query: 62  NVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +V   +    +  P  E +LL+   L        +R   R LD+G G+G + L L     
Sbjct: 95  DVEEEVQHRWYVDPLWEADLLIRLML--------RRGGARALDMGCGSGVLSLVLADRYE 146

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               +GVD++ +A+ +++ NA  NG++      + D F   EG F  IV N P  E    
Sbjct: 147 --SVLGVDVNPRAVALSRLNAALNGLT-NVTFREGDMFEPAEGRFSRIVFNSPTNEEGNE 203

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               LE    +P               T    V R L   G+ 
Sbjct: 204 FVDLLEAG--EP------------ILETFFRNVPRKLESGGIV 232


>gi|172056131|ref|YP_001812591.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
 gi|171988652|gb|ACB59574.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
          Length = 198

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/196 (24%), Positives = 71/196 (36%), Gaps = 35/196 (17%)

Query: 64  RLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKE 118
              L  +TF    +  +     VD      +    + DV   ILD+G G G + ++L K 
Sbjct: 20  EFVLRGETFRFTSDHGVFSKGGVDFGSRLLIEAFTEPDVSGAILDVGCGYGPMGISLAKT 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           +   + V VD++ +ALE+A  NA  NGVS       SD ++ V G  F  IV+NPP    
Sbjct: 80  T-GREAVLVDVNERALELAADNARANGVSVTTGV--SDGYAGVVGQTFAAIVTNPPIRA- 135

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVV 236
                                   G +    I      HL+  G   V I   Q      
Sbjct: 136 ------------------------GKTVVHRILREAYDHLDVGGALWVVIQKKQGGPSAK 171

Query: 237 RIFESRKLFLVNAFKD 252
           ++ E          +D
Sbjct: 172 KLMEEVFGSCETVTRD 187


>gi|328758427|gb|EGF72043.1| methyltransferase, HemK family [Propionibacterium acnes HL020PA1]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|262831379|sp|A8AD10|TRMN6_CITK8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++  +A   A+ N   +   +R 
Sbjct: 39  WAPVAGVTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY E          E   +    +LD        +
Sbjct: 99  TVHTEDVRQWVPRQTARFDLIISNPPYYEQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +    +  + ++G   V +         +   S    L     D    +     RVLL
Sbjct: 149 EALLTTAAECITEEGFFCVVLPEQTGNTFTQQALSMGWHL-RLRTDVAETESRLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|322703569|gb|EFY95176.1| hypothetical protein MAA_09381 [Metarhizium anisopliae ARSEF 23]
          Length = 222

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 32/208 (15%)

Query: 35  RFFLTNAIVRSLKHE---SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP 91
              +++ I  + KH         +G     N  L +    + P+   E L       +LP
Sbjct: 9   EKRISDLINEAKKHREAYPAQ--VG-----NFELQIHPSVYSPKYFPETL---WYGQNLP 58

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            I K      L++G G+G V L L       K +G DI+  A+E AK N   N  +  F 
Sbjct: 59  SIVK--GGSFLEMGVGSGLVSLHLAAS--GSKVIGADINPFAVETAKGNFSRNRQAGTFV 114

Query: 152 TLQSDWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              SD F  ++G FD I  N P+ I+S + D L  E + FD    L     G    +   
Sbjct: 115 V--SDIFDQIDGKFDYIFWNHPWQIDSSVPDELKTE-KTFD----L-----GYHLLQRFV 162

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              + +L +DG   +  G +   D+  I
Sbjct: 163 AESANYLTEDGKVLL--GTSSFADLKAI 188


>gi|307262508|ref|ZP_07544153.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306867885|gb|EFM99716.1| Ribosomal RNA small subunit methyltransferase C [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 329

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 23/124 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LDLG G G +  +L ++    K    DI   ALE ++     N +      + SD FS
Sbjct: 192 KVLDLGCGAGVIGASLKQQFEKIKLTMSDIHAMALESSRHTLAENSLEG--TVVASDVFS 249

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +E  FD+IVSNPP+ + +                              +     + LN+
Sbjct: 250 HIEERFDLIVSNPPFHDGIDTA---------------------YRAVEDLIAQAKQRLNR 288

Query: 220 DGLC 223
            G  
Sbjct: 289 GGEL 292


>gi|322418198|ref|YP_004197421.1| type 11 methyltransferase [Geobacter sp. M18]
 gi|320124585|gb|ADW12145.1| Methyltransferase type 11 [Geobacter sp. M18]
          Length = 267

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 27/173 (15%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y++R+      +    +  LL D A          R   R  DLGTG G + L L + + 
Sbjct: 24  YDLRIIQPRHGYRFSVDPLLLADFA--------GVRQGERCADLGTGCGVIALLLARLTE 75

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYI 175
                 ++      +IA  N   NG+SER + ++ D  S ++G      FD++VSNPPY 
Sbjct: 76  NCSVTAIEFQQVMADIAARNVALNGLSERVEIVEEDVIS-LKGHFPVDSFDLVVSNPPYR 134

Query: 176 ESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       RD    +   +L                    +   G   +
Sbjct: 135 RPGTGKVSPRAGRDEARHETSATLA----------DFLAAAKYLVKPSGRICL 177


>gi|145297572|ref|YP_001140413.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|226712987|sp|A4SIE3|RSMC_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|142850344|gb|ABO88665.1| ribosomal RNA small subunit methyltransferase C [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 342

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 23/131 (17%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 +LD G G G +   L K +P  +   VDIS  ALE ++     NG+  +     
Sbjct: 200 PPMTGELLDFGCGAGVIGSVLAKRNPGLEVKMVDISALALESSRRTLAINGLQGQVQA-- 257

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           SD +S + G FD IVSNPP+            ++ F             +   T      
Sbjct: 258 SDVYSDITGKFDHIVSNPPFHAG---------LKTF------------YAATETFLAKAP 296

Query: 215 RHLNKDGLCSV 225
            +L+ +G  ++
Sbjct: 297 EYLSANGGLTI 307


>gi|323702402|ref|ZP_08114067.1| ribosomal protein L11 methyltransferase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532708|gb|EGB22582.1| ribosomal protein L11 methyltransferase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 308

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 31/220 (14%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRLTLSSDT--FEPRPETEL 80
             L       +     + +  E       W  +Y       RL +      + P PE  L
Sbjct: 83  ERLAALPLADVPRMETKRVAEEDWA--TAWMKYYKPVEIGRRLAVKPSWEDYTP-PEGRL 139

Query: 81  LVDSALAFSLPRIEK--------------RDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +++     +                    +     +D+GTGTG + +   K     K + 
Sbjct: 140 VLELDPGMAFGCGNHPTTTMCMEFLEEIIKGGETAVDVGTGTGILAITAAK-LGAAKVIA 198

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           VD+   A+++A+ N   N V  + + LQ +    V    D++++N   I + ++  L  +
Sbjct: 199 VDLDEVAVQVARENVQRNQVQGQVEVLQGNLLDKVTQPVDLVIAN---IIAKVIIILAPD 255

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           VR     +   G        R  A+ V   L + G   +E
Sbjct: 256 VRKI---LKPGGYFIASGIIRFRAEEVREKLQEAGFKVLE 292


>gi|282853294|ref|ZP_06262631.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|282582747|gb|EFB88127.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|314982831|gb|EFT26923.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA3]
 gi|315091150|gb|EFT63126.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA4]
          Length = 505

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP+  L V  A            V   LD+G G G   L L + +     V  D++ +AL
Sbjct: 143 RPDYVLGVSPASVSLTQMAVPTHVGSALDMGCGCGVQSLHLSRHAD--HVVATDVNPRAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E+A+     +      D      +       FD+IV+NPPY+       +    RD    
Sbjct: 201 EMAQLTCRLSHAD--VDIRDGSLYDPCGHDTFDLIVTNPPYV-------MAPPSRDGQRL 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I  +GG  G      +  G    LN  G+  V   +  
Sbjct: 252 IYREGGFCGDGLVEAVVRGAPARLNDGGMLQVLANWAH 289


>gi|269122208|ref|YP_003310385.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268616086|gb|ACZ10454.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 201

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 32/170 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L   L     ++  + LD+G G G V +      P       D++ +ALE+A+ N  
Sbjct: 46  ELMLKTFLKHSSLKEG-KFLDIGCGYGPVGIIAKSFVPGLDISLSDVNERALELAEKNIK 104

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N ++E ++ ++S  F ++   FD I+SNPP                            G
Sbjct: 105 LNNITE-YNIIKSYIFDNIHENFDCILSNPPIRA-------------------------G 138

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIFESRKLFLV 247
                 I +   +HLN +G+    +            +  IF + K   +
Sbjct: 139 KDVIFKIYEESWKHLNTNGVFYCVLQTKHGAKSTFKKLEEIFGNCKTLDI 188


>gi|226349580|ref|YP_002776694.1| hypothetical protein ROP_pROB01-03430 [Rhodococcus opacus B4]
 gi|226245495|dbj|BAH55842.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 216

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 14/158 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ ++ LL++     SL   +     RILDL  GTG V +             VD
Sbjct: 7   PGVYRPQHDSRLLLE-----SLGDEQVHAGTRILDLCAGTGVVSV-WATRYGARSVTAVD 60

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           +S +AL     N        R   ++ D  S V    FD+IV+NPPY+     D L    
Sbjct: 61  VSRRALVSTWLNTAV--RGHRVRVVRGDLVSRVRHRRFDLIVANPPYVP-AEHDGLPARG 117

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R        D G +G +    I       L+  G   +
Sbjct: 118 R----ARCWDAGHEGRALLDRICGDAPDLLDDGGRLVL 151


>gi|256810383|ref|YP_003127752.1| protein of unknown function DUF890 [Methanocaldococcus fervens
           AG86]
 gi|256793583|gb|ACV24252.1| protein of unknown function DUF890 [Methanocaldococcus fervens
           AG86]
          Length = 260

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 14/177 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  + + +    +   P P    L  ++   +L ++   +  ++L++GTG  A+   L+K
Sbjct: 46  KVLFGLDVEFHENGLIPTPINRYLFINSTFETLKKL-NIEKPKVLEIGTGHSAIISLLIK 104

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
           +    +    ++    +E AK N   N +  +    +      +    +  FD+I+S PP
Sbjct: 105 KFYEAEVYATEVDNDFIEFAKRNVKRNKLDVKIINSKGKIIEGIDEIKDEKFDLIISYPP 164

Query: 174 YIESVIVDCLGLEVRDFDPRIS----LDGGID-GLSHYRTIADGVSRHLNKDGLCSV 225
           +     V       R F   ++    L GG + G      I +     LN+ G+ S+
Sbjct: 165 FYSKNSVASG----RKFGGALAKNVELIGGGNFGEEFSLRIIEEGINFLNEKGVISL 217


>gi|162446999|ref|YP_001620131.1| methyltransferase [Acholeplasma laidlawii PG-8A]
 gi|161985106|gb|ABX80755.1| methyltransferase [Acholeplasma laidlawii PG-8A]
          Length = 239

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 26/194 (13%)

Query: 57  WRDFYNVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            RD    +L + SD  +    +T +L D            +D   ILD GTG GA+ L L
Sbjct: 3   KRDLLGTKLYIESDIGKAFNMDTIILSDFV-------RVPKDTKSILDFGTGNGAIMLYL 55

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPY 174
            +        G+++  K  E+A  N   N +  R D +  D  +       D+IVSNPP+
Sbjct: 56  SQRFSG-HITGIELQEKRYELAVHNIKLNNLESRLDVVNMDLKTYRSKKHADIIVSNPPF 114

Query: 175 IE----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +    +     + +++   +  ++L           T+ + VS+++   GL  +    N
Sbjct: 115 FKVNNQTKQSIDMDMQIAKHEIHLNL----------ETLIEAVSKNIKHGGLFFMVHKAN 164

Query: 231 QKVDVVRIFESRKL 244
           +  ++  I E  K 
Sbjct: 165 RLEEI--ILELNKF 176


>gi|317046810|ref|YP_004114458.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
 gi|316948427|gb|ADU67902.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
          Length = 343

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 63/162 (38%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +      F  R      +D+  A  L  +      ++LD+G G+G +   L + SP 
Sbjct: 166 GLTIHTQPGVFS-RDG----LDAGSALLLSTLTPHTKGKVLDIGCGSGVLATVLAQHSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   A+  +K+    NG+    +   S+ FS V G FD+I+SNPP+       
Sbjct: 221 VRLWLCDVHAAAVAASKATLAANGLEG--EVFASNVFSDVTGRFDLIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L    T+  G  +HL+  G  
Sbjct: 273 ---------------DGLQTSLDAAHTLIRGAVKHLSSGGEL 299


>gi|332667668|ref|YP_004450456.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332336482|gb|AEE53583.1| tRNA (adenine-N(6)-)-methyltransferase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 264

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 14/162 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +     RILD+G GTG + + L + +       V++   A E A+ N      + R +
Sbjct: 58  WADTSQAKRILDIGAGTGIIAIMLGQRNAEAIIHAVEVDDLAFEQAQENMRNAPWANRLE 117

Query: 152 TLQS---DWFSSVEGLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGIDGLSHYR 207
            +     D+  +    +D+IVSNPP+                   ++       G     
Sbjct: 118 VIHHSIQDFAETQPQQYDLIVSNPPFFSGGTFSFNQDRNSVRHTIKL-----PHGD---- 168

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +   V + L K G   V + + + +    +  S   +    
Sbjct: 169 -MLRAVQKLLTKSGKFCVILPFVEGLRFQELAGSYHFYCTRV 209


>gi|306836276|ref|ZP_07469258.1| transferase [Corynebacterium accolens ATCC 49726]
 gi|304567868|gb|EFM43451.1| transferase [Corynebacterium accolens ATCC 49726]
          Length = 525

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/253 (22%), Positives = 91/253 (35%), Gaps = 31/253 (12%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRD--FYNVRLTL 67
            L    G      ++D    L D +        +R       H I+G     F +V  +L
Sbjct: 81  LLTDALGARLAAKLLDAGVALSDDRGSIYIALDIR------PHIIVGSNRLVFSDVDASL 134

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVG 126
                 P  +  L V +A    L       V  +LDLGTG+G     LL +    +    
Sbjct: 135 VDHV--PGADHVLGVGAASLSLLQSTPVSPVSTVLDLGTGSGVQ---LLGQLECARSITA 189

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGL 185
            D+  +AL++A +     G S   + ++  WF  V G  FD IV+NPP++  V +  +G 
Sbjct: 190 TDVHRRALDLAGATVAAAGSSPEVELIEGSWFEPVAGRTFDRIVANPPFV--VGLPEVGH 247

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIF 239
             RD    ++LDG          +      HL   G   +        G   +  V    
Sbjct: 248 VYRDSG--LNLDGAS------ELVVSLAVDHLAPGGTAHLLAAWVHTGGQTWQQRVASWL 299

Query: 240 ESRKLFLVNAFKD 252
             + +      +D
Sbjct: 300 PDKGVAAWIIQRD 312


>gi|282878367|ref|ZP_06287159.1| methyltransferase small domain protein [Prevotella buccalis ATCC
           35310]
 gi|281299553|gb|EFA91930.1| methyltransferase small domain protein [Prevotella buccalis ATCC
           35310]
          Length = 232

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GTGTG + L + +         ++I   A   AK N   +  ++R    + 
Sbjct: 34  KGGRRILDVGTGTGLIALMMAQRYAASFVEALEIDRDACRQAKVNVEASPFADRVRVREV 93

Query: 156 DW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
               F SV+  FD IVSNPPY            +R  D + S+    D LS Y+ +    
Sbjct: 94  ALQQFESVK-QFDSIVSNPPYFVEG--------LRSPDAKRSMARHSDTLS-YKALCQSA 143

Query: 214 SRHLNKDG 221
            R L  +G
Sbjct: 144 YRLLTNEG 151


>gi|212638680|ref|YP_002315200.1| ribosomal protein L11 methyltransferase [Anoxybacillus flavithermus
           WK1]
 gi|226707856|sp|B7GKD0|PRMA_ANOFW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|212560160|gb|ACJ33215.1| Ribosomal protein L11 methylase [Anoxybacillus flavithermus WK1]
          Length = 312

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 71/218 (32%), Gaps = 52/218 (23%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +YN      R T+    +T+EP    EL+++              + +       
Sbjct: 112 TAWKKYYNPVKISERFTIVPTWETYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALEK 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +A        +   +D+   A+E AK N   N V +     
Sbjct: 172 TVKKGDTVVDVGTGSGILSIAAAMLGAK-RVHALDLDPVAVESAKLNVKLNKVHDVVTVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    ++   DVIV+N                      ++               D  
Sbjct: 231 QNNLLDRMDEQADVIVAN---------------------ILA--------EIILRFVDDA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
            R L  DG+     I   +K +V          +    
Sbjct: 262 YRLLRSDGVFITSGIIQTKKQEVKEGLLRAGFTIEETL 299


>gi|311113255|ref|YP_003984477.1| methyltransferase domain-containing protein [Rothia dentocariosa
           ATCC 17931]
 gi|310944749|gb|ADP41043.1| methyltransferase domain protein [Rothia dentocariosa ATCC 17931]
          Length = 248

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 29/179 (16%)

Query: 45  SLKHESIHRIL----GWRDFYNVR--LTLSSDT-FEPRPETELL---------------- 81
                S+  ++    G+  F + +   + S +  F+PR     L                
Sbjct: 20  RCGRISVAAMMRGAAGYTGFMSEQHYFSSSPEVEFKPRTVQVELAGRQVSVTTANGIFSP 79

Query: 82  --VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
             +D   A  L ++ +     +LD+G G G + L+L   +P  +  G+D++ ++L + + 
Sbjct: 80  SGIDKGTAVLLAQVPEPHGKYMLDIGCGWGPITLSLAMLAPQSEVYGIDVNSRSLSLTEQ 139

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA   G+         D        FD I SNPP    V  + L   +  + PR++  G
Sbjct: 140 NARALGL-HNVSVSTPDEIDPTL-RFDTIWSNPPI--RVGKEVLHNILLAWLPRLAPGG 194


>gi|283781797|ref|YP_003372552.1| methyltransferase small [Pirellula staleyi DSM 6068]
 gi|283440250|gb|ADB18692.1| methyltransferase small [Pirellula staleyi DSM 6068]
          Length = 336

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 54/162 (33%), Gaps = 30/162 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L      F  R      VD+     L  +E R    +LD+G G G V L + K  P  
Sbjct: 168 LQLQTRPGVFNHRS-----VDAGARALLSAVEVRAGESVLDIGCGCGVVGLVICKRLPTA 222

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + +D   +A+E  +++A  N + +    L     S  +  FDV+  NPPY  +     
Sbjct: 223 TVLAIDSHSRAIECTQASAERNELPQLTARLDPSHKSVPDASFDVVAMNPPYFSN----- 277

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                                          +R L   G   
Sbjct: 278 --------------------FRIAELFLQTATRALKPGGRLY 299


>gi|253576898|ref|ZP_04854223.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843765|gb|EES71788.1| methyltransferase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 251

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 26/191 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +++ +  S + F    +  LL   A              +ILDL TG G + L LL    
Sbjct: 18  HDLHIIQSDEVFSFSMDAVLLARFA--------PVPKYGKILDLCTGNGVIPL-LLSTRT 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE 176
             K  G++I  +  ++A+ +   NG++ R +  + D    V     G++D I  NPPY+ 
Sbjct: 69  EAKIEGIEIQPRLADMARRSVEMNGLTHRIEIREGDLRELVRVTGHGVYDAITVNPPYMP 128

Query: 177 ---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL            +A    R +   G  S+     +  
Sbjct: 129 VTSGEAKLNTYQAIARHEIHCSL----------EEVAAASMRLVRPGGKVSMVHRPQRLG 178

Query: 234 DVVRIFESRKL 244
           +++ +    +L
Sbjct: 179 EIMTLLRQYRL 189


>gi|144898410|emb|CAM75274.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 249

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 15/180 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ R   RILDLG+G G   L LL         G+++  +  ++A++NAV NG+  R+  
Sbjct: 41  VDARAGERILDLGSGVGTAGLCLLARVDGIHVTGLELQSQLADLAQANAVENGLDGRYTV 100

Query: 153 LQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           +Q    S         FD +++NPP+ E   +     + +         G ++G +    
Sbjct: 101 VQGCLTSRPATLRGVTFDHVITNPPWYEPGTIRAPRADSKAI-------GHLEGEADLAQ 153

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG--GND--RVLLFCR 264
                 +++   G   +    +    ++   E  K+  +     +   G    RV++  R
Sbjct: 154 WLRAAVKYVKPKGRLWLIHRADHLGRILSGLEGLKVGEIRVVPIWSKQGRAATRVVVTAR 213


>gi|218507715|ref|ZP_03505593.1| protoporphyrinogen oxidase (methyltransferase) protein [Rhizobium
           etli Brasil 5]
          Length = 100

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 43/78 (55%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
               D+   +  +   SS +++      +   Q   ++ A+ R L HE +HRILG R+FY
Sbjct: 23  DPATDARLLVAGLLKQSSTELLTRSAEKISPDQIAMISKALERRLGHEPVHRILGEREFY 82

Query: 62  NVRLTLSSDTFEPRPETE 79
            + L LS++T EPRP+TE
Sbjct: 83  GLPLQLSAETLEPRPDTE 100


>gi|148652908|ref|YP_001280001.1| methyltransferase small [Psychrobacter sp. PRwf-1]
 gi|148571992|gb|ABQ94051.1| methyltransferase small [Psychrobacter sp. PRwf-1]
          Length = 400

 Score = 80.5 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 69/203 (33%), Gaps = 28/203 (13%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLV 82
           +D   VL  R       A     K   +  +        V +      F P R E   L 
Sbjct: 162 MDEACVLSFRDLQGALGAAQWRKKGVPVEAL-------GVSIHPHYGVFAPTRQEYVQL- 213

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
                  L     +      D+GTGTG + + L +     + +  D++ +AL+ A  N  
Sbjct: 214 ------LLDAPMPKPCDIAYDIGTGTGLLSIVLAQRGVK-EVIATDLNPRALDCADDNFE 266

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              + E+    Q D +     L ++IV NPP++ +       LE   +D   +       
Sbjct: 267 RLQI-EQVQLQQIDLYPKQAPLANLIVCNPPWLPA--KPSSPLEYAVYDANSA------- 316

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
               R    G   HL  +G   +
Sbjct: 317 --MLRGFFMGAKSHLADNGEVWL 337


>gi|15603704|ref|NP_246778.1| hypothetical protein PM1839 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81856689|sp|Q9CJZ9|TRMN6_PASMU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|12722264|gb|AAK03923.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 237

 Score = 80.1 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 18/161 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +     RILDLGTGTG + L L + S    +   V++   A   A++N   +  ++R 
Sbjct: 34  WADVSQSERILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANVHASPWAQRV 93

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q D           FD+IV+NPPY            ++  +    +    +D L   
Sbjct: 94  HVYQQDAAEFCRNAVNKFDLIVANPPYFPQGVDCATPQRDLARY---TATHRHVDWL--- 147

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
               +  S  L++ G  S+ + +        + +   L+ +
Sbjct: 148 ----NWASHCLSEQGKISMVLPFEAGE---TLLKQTALYCI 181


>gi|261337500|ref|ZP_05965384.1| putative methyltransferase small domain protein [Bifidobacterium
           gallicum DSM 20093]
 gi|270277897|gb|EFA23751.1| putative methyltransferase small domain protein [Bifidobacterium
           gallicum DSM 20093]
          Length = 218

 Score = 80.1 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 10/144 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               + +++       +   L    L    P +   +    LDLG+G G + LA+  ++P
Sbjct: 39  RGHEVQVNTSHGVFSADRVDLGTQVLLRHAPDLP--ETGTFLDLGSGWGPIALAMALDAP 96

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VD++ +++++ + NA  NG +        D    V   F  I SNPP    +  
Sbjct: 97  DARVYAVDVNERSIDLTRENAQANGCANIVAGTAQDVPDDV--RFARIWSNPPI--RIGK 152

Query: 181 DCLGLEVRDFDPRISLDGGIDGLS 204
           + L   +  + PR+      DG +
Sbjct: 153 EALHELLMTWLPRL----EPDGYA 172


>gi|256397545|ref|YP_003119109.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
 gi|256363771|gb|ACU77268.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
          Length = 496

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 16/176 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L V  A         +      LD+GTG G   L L       + VG D + +AL
Sbjct: 125 REDHVLGVGGASTTLAQLTIRDQFGSALDVGTGGGVQALHLSTHVE--RVVGSDRNPRAL 182

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           ++A+     +GV   FD  +   F  VEG  FD++VSNPP++ S      G         
Sbjct: 183 KLARLTQQLSGVGP-FDLREGSLFEPVEGERFDLVVSNPPFVISPDNGAQGGRF------ 235

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY------NQKVDVVRIFESRK 243
           +  D G+      R +     RHL +DG C V   +      + +  V        
Sbjct: 236 VYRDSGLPADEVCRRLVSNAHRHLAEDGWCQVLANWLHVDGVDWRERVAEWVRDTG 291


>gi|156084978|ref|XP_001609972.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797224|gb|EDO06404.1| conserved hypothetical protein [Babesia bovis]
          Length = 229

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 51/212 (24%)

Query: 55  LGWRDFY------NVRLTLSSD-TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +G  D++      +V   +  D  + P  +T L ++ AL   +  I  ++++ ++++G G
Sbjct: 1   MGSSDYHIRLDCTHVEFGVYRDSVYCPGEDTFLFIE-ALENDIDYILSKNMLCVMEIGCG 59

Query: 108 TGAVC---LALLKES----PFF-------KGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +G +    + LL+      P           + VDI+  A          N V ER DT+
Sbjct: 60  SGYISTYFIKLLQRCGKLSPDAGSHRTIPFVITVDINPAATMATVETLERNKVVERADTM 119

Query: 154 QSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD----GGIDGLS 204
            +D F  +     + + D+++ NPPY+ S  +           P+ ++D    GG  G  
Sbjct: 120 TADMFLPLLPQRSQEVLDMVMFNPPYVPSEEIGN---------PKSAIDRAWEGGFMGRE 170

Query: 205 HYRTIADG-----------VSRHLNKDGLCSV 225
                              V ++L+ +G+  +
Sbjct: 171 IIDRFLADIGVGPYNTNETVQQYLSNNGIFYL 202


>gi|254508234|ref|ZP_05120358.1| SmtA protein [Vibrio parahaemolyticus 16]
 gi|219548851|gb|EED25852.1| SmtA protein [Vibrio parahaemolyticus 16]
          Length = 235

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS- 160
           LD+GTGTG + L   +  P      +DI   A + A SN   +   +R    Q D  ++ 
Sbjct: 43  LDIGTGTGLLALMCAQRKPTLTIDAIDIDQNACDAAISNFSNSPWQDRLTLHQGDILNAE 102

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FD I+ NPPY  S             D   ++    D L+H  ++       L   
Sbjct: 103 FSHRFDAIICNPPYFNSGEKAQ--------DTSRAIARHTDTLNHS-SLLTRCWERLTAQ 153

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           G  S      +    + +   +   +    +
Sbjct: 154 GKASFVFPVTEGEAFISLAIDQGWHVQRLCR 184


>gi|163753132|ref|ZP_02160256.1| putative RNA methyltransferase [Kordia algicida OT-1]
 gi|161326864|gb|EDP98189.1| putative RNA methyltransferase [Kordia algicida OT-1]
          Length = 237

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 15/167 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +   IE      ILD+G GTG + L L +         ++I   A E A  N  
Sbjct: 24  DGVLLGAWTSIENHPF-SILDIGAGTGLIALQLAQRCHAEVIDAIEIDAAAYEQAVDNFE 82

Query: 143 TNGVSERFDTLQSDWFS---SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDG 198
            +  S+R     +        +E  +D+IVSNPP Y E+   +    +   F        
Sbjct: 83  NSPWSDRLFCYHAGLDEFVDEIEDTYDLIVSNPPFYTENYKTESAQRDTARF-------- 134

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             D L     +  GV++ L   G     I + +    + + ++ KLF
Sbjct: 135 -TDALPFS-ALLSGVAKLLAPTGTFHTIIPFKEHEHFINLAKANKLF 179


>gi|325264822|ref|ZP_08131550.1| SAM-dependent methyltransferase [Clostridium sp. D5]
 gi|324029811|gb|EGB91098.1| SAM-dependent methyltransferase [Clostridium sp. D5]
          Length = 239

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 20/154 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R++K +   +LDLGTGTG + + L  ++      G++I  ++ ++A+ + 
Sbjct: 32  IDAVLLSDFVRVKKDET--VLDLGTGTGILPILLAAKTRGKHFTGLEIQAESADMAERSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             N + ++ D +  D   + E      FDVIV+NPPY+ S        + +     +   
Sbjct: 90  EHNRLGDQIDIVTGDIKEAAEIFRPAFFDVIVTNPPYMLSEHGLQNPQDAKAIARHEVLC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNK-DGLCSVEI 227
           +LD           I     + L +  G   +  
Sbjct: 150 TLD----------DILRESGKLLQESKGRFYMIH 173


>gi|224223723|gb|ACN39738.1| SibO [Streptosporangium sibiricum]
          Length = 245

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 17/164 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +    V  +L++G G G   + L   +   +   +DI+  A+  A+ NA  +GV++R   
Sbjct: 54  LPYDGVHSMLEMGCGCGVAAV-LGALAGVPRVTALDINPAAVRTAQLNAERHGVADRVTA 112

Query: 153 LQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRT 208
           L SD FS+V  +  +D+I  N P+I+      L  ++     DP         G + +  
Sbjct: 113 LVSDLFSAVPEDTAYDLIFWNSPFIQVPADHALDSDLAYHFFDP---------GYTMHER 163

Query: 209 IADGVSRHLNKDGLCSVEIGY--NQKVDVVRIFESRKLFLVNAF 250
                 R L   G   +   +       +     +  L  V   
Sbjct: 164 FLREARRRLTPAGRLFLGFSFAMGSGDRLHDAAAAAGL-DVRIH 206


>gi|319892636|ref|YP_004149511.1| Ribosomal protein L11 methyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162332|gb|ADV05875.1| Ribosomal protein L11 methyltransferase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|323464326|gb|ADX76479.1| ribosomal protein L11 methyltransferase [Staphylococcus
           pseudintermedius ED99]
          Length = 310

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 59/221 (26%)

Query: 57  WRDFYNV-----RLTLSSDT-FEPRPETELLVDSALAFSLPRIEK--------------R 96
           W+++++      R  +        R +T+L ++     +    +               +
Sbjct: 112 WKNYFHPFQASERFFIVPSWESVERDDTQLYIELDPGMAFGTGDHPTTSMCLKALEQIVK 171

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              R++D+GTG+G   L++       +     D+   A+++AK N   N   +  +T   
Sbjct: 172 PEHRVIDVGTGSGI--LSVASYLLGAQSIKATDLDEMAVQVAKENFEKNHCLDAIETATG 229

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +  +  +G +DV+++N               +                     +      
Sbjct: 230 NLLTEEKGQYDVVIAN---------------ILAH--------------IIEKMVQDAYD 260

Query: 216 HLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           HLN +G       +E    ++  V  + E     +     D
Sbjct: 261 HLNPEGYFITSGIIE---EKRESVQTLMEETGFTIKEVKND 298


>gi|293394819|ref|ZP_06639109.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582]
 gi|291422570|gb|EFE95809.1| SAM-dependent methyltransferase [Serratia odorifera DSM 4582]
          Length = 251

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 21/162 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   ++LD+G G+G + L L + SP       V++   A E A+ N + +  S+R 
Sbjct: 45  WAPLAQSGKVLDIGCGSGLIALMLAQRSPAEIHIDAVELDTAAAEQAQENVLQSPWSQRI 104

Query: 151 DTLQS---DWFSSVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFD--PRISLDGGIDGL 203
                   D+     G + +IVSNPPY E  +   D      R  +  P           
Sbjct: 105 RVYAQNIEDFAQRHAGRYALIVSNPPYFEPSVACRDRARDTARYTETLPH---------- 154

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                + D   R L  +G   V + Y          + R   
Sbjct: 155 ---DLLLDCAQRLLGDNGQLCVVLPYAIGEAFAADAQRRGWH 193


>gi|238852660|ref|ZP_04643070.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           202-4]
 gi|238834806|gb|EEQ27033.1| ribosomal protein L11 methyltransferase [Lactobacillus gasseri
           202-4]
          Length = 315

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 37/170 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  A+  +L +      + +LD+GTG+G + +A   +      +G DIS +A+  A
Sbjct: 163 TTQLVLLAMERALVK-----PMSVLDIGTGSGILAIA-ASKLGASHVLGTDISDEAVTAA 216

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           K N   N V    +  +++    ++  +D+IV+N                      ++  
Sbjct: 217 KENIALNDV-NNINVRKANLLKDIDDKYDLIVAN---------------------ILA-- 252

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
                      +   +  HLNK+G      I Y Q   V +        +
Sbjct: 253 ------DILLELIPDLDSHLNKEGKVIFSGIDYLQLSKVEKALAENNFEI 296


>gi|291085014|ref|ZP_06351774.2| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220]
 gi|291071652|gb|EFE09761.1| SAM-dependent methyltransferase [Citrobacter youngae ATCC 29220]
          Length = 268

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V+++  A + A+ N   +    R 
Sbjct: 62  WAPVAGVKRILDIGTGSGLLALMLAQRTDDNVMIDAVELNVDAAQQAQENIAQSPWMHRV 121

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +    D   W       FD+I+SNPPY E          E   +    +LD        +
Sbjct: 122 NVHTEDAQLWIPRQTVRFDLIISNPPYYEQGVECATPQREQARY--TTTLD--------H 171

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           + +    +  + +DG   V +         +   S    L
Sbjct: 172 QALLTLAADSITEDGFFCVVLPEQIGNAFTQQALSMGWHL 211


>gi|77464322|ref|YP_353826.1| N-6 adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
 gi|77388740|gb|ABA79925.1| N-6 Adenine-specific DNA methylase [Rhodobacter sphaeroides 2.4.1]
          Length = 253

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT      +PR       D  L      +       +L+LG G G   L L    
Sbjct: 12  FLGGRLT----VLQPRRGYRAATDPVL--LAAAVPASAGQSVLELGCGAGVASLCLAARV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +  G+++      +A+ NA  NGV+   + ++ D     +++   FD +++NPPY  
Sbjct: 66  PGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAMPAALRQSFDHVIANPPYYP 123

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               +   D         +  ++            T  +   R L   G+ S+  G ++ 
Sbjct: 124 AGGGTGAADPGRERAMREETPLA------------TWIEAAVRRLAPRGVLSLIFGADRL 171

Query: 233 VDVVRIFESR 242
            D +   + R
Sbjct: 172 PDALAALDGR 181


>gi|282860068|ref|ZP_06269149.1| methyltransferase small domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282587156|gb|EFB92380.1| methyltransferase small domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 234

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 12/135 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + ILD+GTGTG + L + +  P  K VG+DI   A++ A  N   +   ER    Q 
Sbjct: 31  KGGLNILDIGTGTGLIALMMAQRFPNSKVVGIDIDENAIKDALYNVRNSSFIERVSIEQI 90

Query: 156 DWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              +  +     FD +V NPPY  + +               ++    D LS Y  +   
Sbjct: 91  TLQTYGKKHANEFDAVVCNPPYFINSLKTLSE--------SRTIARHTDSLS-YAELVRY 141

Query: 213 VSRHLNKDGLCSVEI 227
               L   G+ SV I
Sbjct: 142 AKEILKDKGIFSVII 156


>gi|254392232|ref|ZP_05007418.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|197705905|gb|EDY51717.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
          Length = 229

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 14/146 (9%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A       +   +    L++G GTG + +     S       +DI+ KA+    +NA  
Sbjct: 47  AATEVLASMVPYPEGGSFLEVGCGTGVIAVTAAL-SGCTSVTALDINEKAIANTVANAER 105

Query: 144 NGVSERFDTLQSDWFSSVE--GLFDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGG 199
           +GVS+R   L SD ++++     FD I  N P  Y+E        L    FDP       
Sbjct: 106 HGVSDRVRALHSDMYTALAPTDRFDTIFWNVPWTYVEDGYALSTDLHTAVFDP------- 158

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
             G         G   HL   G   +
Sbjct: 159 --GYRGQARYLAGAHEHLADGGRLLL 182


>gi|156337258|ref|XP_001619839.1| hypothetical protein NEMVEDRAFT_v1g223766 [Nematostella vectensis]
 gi|156203785|gb|EDO27739.1| predicted protein [Nematostella vectensis]
          Length = 248

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 9/150 (6%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             LV  A      +      ++ L++G G GA+ +    + P  +    DI+  A++   
Sbjct: 55  NELVSMARGLLKQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVDDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            NA  +GV      +Q+D F   +     FD+I   PP   +   +    +  D   R +
Sbjct: 115 ENARLHGVETSVTAIQADVFDCDDLKGMKFDMIFFRPP---AGFCEGCNEKDLDMSSRTA 171

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            D      S       G    L   G   +
Sbjct: 172 WDPN---YSILERYLKGARGFLGNGGKLLL 198


>gi|297563107|ref|YP_003682081.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847555|gb|ADH69575.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 498

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 17/173 (9%)

Query: 56  GWRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           G   F      +   +   P P+  +    A +     I    V R LD+GTG G   L 
Sbjct: 116 GRPGFVVSDPKVRPGSGAVPAPDHVVGAGGASSTLSQLIVDGPVERALDVGTGCGVQALH 175

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
           L   +   + V  D++ +A+ +A  +   +GV++     Q   +  V G  FD+IVSNPP
Sbjct: 176 LASRAR--EVVATDLNPRAVRLAGISLALSGVTD-ARLEQGSLYEPVAGERFDLIVSNPP 232

Query: 174 YIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++ +          R+ D P         G +    +      HL + G C +
Sbjct: 233 FVITPDSSRYT--YRESDLP---------GDTVCAELVRQAPAHLTEGGWCQI 274


>gi|168334727|ref|ZP_02692859.1| ribosomal protein L11 methyltransferase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 312

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 32/155 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+GTG+G + +   K       +GVDI   ++++A  N   NGV++    +Q 
Sbjct: 173 KKSNRVLDVGTGSGILGIVAAKL--GASVLGVDIDPMSVKVAIENVAINGVADDMAVVQG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    D+++SN                      I+             +A  V +
Sbjct: 231 DLLEVVAEKADIVISN---------------------IIA--------DVIIVLAAQVRQ 261

Query: 216 HLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            L   G   +  I   +K  V++  E     +V  
Sbjct: 262 VLKPGGVWIASGIIDTKKAAVLKAVEKHGWEVVEV 296


>gi|303241042|ref|ZP_07327552.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
 gi|302591467|gb|EFL61205.1| putative RNA methylase [Acetivibrio cellulolyticus CD2]
          Length = 251

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 25/190 (13%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  +++      F    +  LL + A        + +    ++DLGTGTG + + L  ++
Sbjct: 16  YKGLKIIQKDKAFRFGLDAVLLANFA--------DVKKGNSVIDLGTGTGIISILLAGKT 67

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
                VG++I     E+A  +   N + +R   +  D   SV       FDV+VSNPPY+
Sbjct: 68  EAKSIVGLEIQEDIAEMADRSVKMNCLEDRVKIVCGDIKESVGRFGASSFDVVVSNPPYM 127

Query: 176 ESVIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                     +   +   +   SL            +    S+ L   G  ++    ++ 
Sbjct: 128 NQGGGLINIRDTKAIARHEILCSL----------EDVVKSASKLLVSGGQFAMVHRPDRL 177

Query: 233 VDVVRIFESR 242
            D++      
Sbjct: 178 ADIIWFMRKY 187


>gi|213964724|ref|ZP_03392924.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46]
 gi|213952917|gb|EEB64299.1| rRNA or tRNA methylase [Corynebacterium amycolatum SK46]
          Length = 521

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 76/189 (40%), Gaps = 25/189 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISC 131
            P P+  L V  A    L       V  +LDLG G G   LA     P  K  V  DI  
Sbjct: 144 VPGPDHVLGVGRASRSLLDISPTSAVESVLDLGAGCGIQSLA----QPDAKSIVATDIHP 199

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +AL  A++    NG  ++   L+  WF  V G  FD IV+NPP++  V +  +    RD 
Sbjct: 200 RALFFARATFAANGF-DQAQALEGSWFEPVAGQKFDRIVANPPFV--VGLPSVEHVYRDS 256

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNK-------DGLCSVEIGYNQKVDVVRIFESRK 243
              ++LDG          +  G++ HL+             +E G + +  +     +  
Sbjct: 257 G--LNLDG------ATELMIRGLADHLSDCGTAHLLGAWAHIE-GQSWQQRIASWLPAEG 307

Query: 244 LFLVNAFKD 252
           L +    +D
Sbjct: 308 LEVWVTQRD 316


>gi|261880672|ref|ZP_06007099.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361]
 gi|270332625|gb|EFA43411.1| SAM-dependent methyltransferase [Prevotella bergensis DSM 17361]
          Length = 232

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 10/143 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+G GTG V L L +  P     G++I  +A E  + N   +  ++R     S
Sbjct: 33  RGGRRLLDIGAGTGLVSLMLAQRFPSATVEGLEIDAEAAEQCQENMAASPFADRVRVYVS 92

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +   V +  +D IVSNPPY  S +        ++ D   +     D ++ ++       
Sbjct: 93  AFQDFVPDAPYDAIVSNPPYFLSGM--------KNNDESRATARHSD-VTFFKDFFRFSK 143

Query: 215 RHLNKDGLCSVEIGYNQKVDVVR 237
           + L   G  S+ +  +   ++  
Sbjct: 144 QWLRPSGEVSLVLPADGVEEISA 166


>gi|322834136|ref|YP_004214163.1| methyltransferase small [Rahnella sp. Y9602]
 gi|321169337|gb|ADW75036.1| methyltransferase small [Rahnella sp. Y9602]
          Length = 248

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 21/175 (12%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              R+LD+G G+G + + L + S     +  V++   A   A+ N + +  ++R      
Sbjct: 47  HARRVLDIGCGSGLIAMMLAQRSNAQTVIDAVELEPSAAAQAEENFLNSVWAQRLAVYAQ 106

Query: 156 DWFS---SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           D  +     +  +D+IVSNPPY ES +   D      R  +              +  + 
Sbjct: 107 DINAYAGEHQAEYDLIVSNPPYFESAVACRDEARNAARYTETLT-----------HDALL 155

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN--AFKDYGGND--RVLL 261
           +  ++ L  +GL SV + Y+  +    +   +  F     A +D  G    R++L
Sbjct: 156 ECANKLLTPEGLFSVVLPYDIGLAFETLAHRKGWFSARRMAVRDRPGKPLNRLVL 210


>gi|323345620|ref|ZP_08085843.1| metallothionein SmtA [Prevotella oralis ATCC 33269]
 gi|323093734|gb|EFZ36312.1| metallothionein SmtA [Prevotella oralis ATCC 33269]
          Length = 234

 Score = 80.1 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +RILD+GTGTG + L + +     + VGV+I   A   A+ N   +    R + + +  
Sbjct: 36  GMRILDVGTGTGLIALMMAQRFAESRVVGVEIDVDACLQAQQNVTESPFVSRVEIINARL 95

Query: 158 FSSVEG-LFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +    FD IVSNPP ++ S+        V      +S          Y  +   V  
Sbjct: 96  QDYLPDIKFDSIVSNPPFFVNSLRNPDKQRSVARHASTLS----------YADLFRSVKV 145

Query: 216 HLNKDGLCSVEIGYN 230
            L + G+ S  I ++
Sbjct: 146 LLAETGVFSAVIPFD 160


>gi|152965470|ref|YP_001361254.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
 gi|151359987|gb|ABS02990.1| methyltransferase small [Kineococcus radiotolerans SRS30216]
          Length = 202

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 11/164 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLK 117
           +     + +++       +    VD   A  LP IE  D    +LDLG G G + L+L  
Sbjct: 23  ELAGREVVVTTARGVFSADH---VDQGTAVLLPLIEDADAAGDVLDLGCGWGPIALSLAL 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P      VD++ +AL++ + NA   GV+ R   L  +    +   F  I SNPP    
Sbjct: 80  RRPRQVVHAVDVNERALDLLRHNAARLGVAVRAS-LPDEVDEDL--RFTEIWSNPPI--R 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKD 220
           +  + L   +  + PR++  GG   L   + + +D + R L   
Sbjct: 135 IGKEALHDLLLRWLPRLAP-GGAAHLVVQKNLGSDSLHRWLESG 177


>gi|302348250|ref|YP_003815888.1| Putative methyltransferase [Acidilobus saccharovorans 345-15]
 gi|302328662|gb|ADL18857.1| Putative methyltransferase [Acidilobus saccharovorans 345-15]
          Length = 207

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+ LS   +EP  ++ L +D+ +     +   R    +LDLGTG+G + LA L      
Sbjct: 16  LRVALSRCVYEPSDDSLLAIDAMVKL---KEMGRTYEAVLDLGTGSGVLALASLLLFRPR 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + V VDIS  A+E A++      +      +Q D    + G +D+I+ NPPY+ S  +  
Sbjct: 73  RLVAVDISPYAVECARAT-----LGPDAAVIQCDGARCLSGGWDLIILNPPYLPSSDIPH 127

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +  +F   ++   G +    +  +    + 
Sbjct: 128 DECDFWEF---MAWSEGAN----HERLCRDAAE 153


>gi|164686291|ref|ZP_02210321.1| hypothetical protein CLOBAR_02729 [Clostridium bartlettii DSM
           16795]
 gi|164601893|gb|EDQ95358.1| hypothetical protein CLOBAR_02729 [Clostridium bartlettii DSM
           16795]
          Length = 313

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 61/221 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEKR-------------- 96
           W+ +Y           +P  E         +++     +                     
Sbjct: 116 WKKYYKPTKVGKKIVVKPSWEDYEKQEGDLIIELDPGMAFGTGTHETTSMCIRELENYVD 175

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+G G+G + +A   E    + V  D+   A++++K N   N VS++       
Sbjct: 176 ETKTVFDIGCGSGILAIA-AAELGAKEVVAGDLDEVAVKVSKENCEINHVSDKVVVKHGS 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            F  V+   DVIV+N                      I+           + +A  VS+ 
Sbjct: 235 LFEVVDSKADVIVAN---------------------IIA--------DIIKILAKDVSKF 265

Query: 217 LNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNAFK 251
           L +DG+       +         +V    E     +V   +
Sbjct: 266 LKEDGVFI-----SSGIILAKIDEVCEALEENGFEIVKVER 301


>gi|156355073|ref|XP_001623499.1| predicted protein [Nematostella vectensis]
 gi|156210207|gb|EDO31399.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 15/153 (9%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           + LV  A      +      ++ L++G G GA+ +    + P  +    DI+  A+E   
Sbjct: 55  KELVSMAHGLLKQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWF--SSVEG-LFDVIVSNPP--YIESVIVDCLGLEVR-DFDP 192
            NA  +GV+     +Q+D F    ++G  FD+I    P  + E      L +  R  +DP
Sbjct: 115 ENACLHGVANSVTAIQADVFDCDGLKGMKFDMIFFRQPGAFREDCDEKDLDMLARTVWDP 174

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S       G    L   G   +
Sbjct: 175 N---------YSVIERYLKGARGFLGNGGKLLL 198


>gi|226533478|ref|NP_001142677.1| hypothetical protein LOC100274972 [Zea mays]
 gi|195608106|gb|ACG25883.1| hypothetical protein [Zea mays]
          Length = 249

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 13/191 (6%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG-AVCLALLKES-- 119
           +R++   + +EP  ++  LVD+ LA     I     +  +++G G+G  +   +L     
Sbjct: 12  MRVSSHREVYEPCDDSFALVDALLADQTNLINHNPNL-CMEIGCGSGYVITSLILLLKSK 70

Query: 120 -PFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIE 176
            P    +  D +  A  +       +GV        + S     + G  DV+V NPPY+ 
Sbjct: 71  LPTVHYLATDTNPIAARVTNQTLEAHGVKAEIVCTDIASCLEERLAGSVDVMVVNPPYVP 130

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDV 235
           +   +     +       S  GG +G S    +   V R L++ G   +  +  N   ++
Sbjct: 131 TPEYEVGMEGI-----ASSWAGGENGRSVIDRMLPVVDRLLSEKGWFYLVTLTSNYPAEI 185

Query: 236 VRIFESRKLFL 246
             +   R    
Sbjct: 186 CLMMRKRGFAW 196


>gi|126463164|ref|YP_001044278.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029]
 gi|126104828|gb|ABN77506.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029]
          Length = 253

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT      +PR       D  L      +       +L+LG G G   L L    
Sbjct: 12  FLGGRLT----VLQPRRGYRAATDPVL--LAAAVPASAGQSVLELGCGAGVASLCLAARV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +  G+++      +A+ NA  NGV+   + ++ D     +++   FD +++NPPY  
Sbjct: 66  PGLRLAGLELQPAYAALARENAALNGVA--LEVVEGDLSAMPAALRQSFDHVIANPPYYP 123

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               +   D         +  ++            T  +   R L   G+ S+  G ++ 
Sbjct: 124 AGGGTGAADPGRERAMREETPLA------------TWVEAAVRRLAPRGVLSLIFGADRL 171

Query: 233 VDVVRIFESR 242
            D +   + R
Sbjct: 172 PDALAALDGR 181


>gi|224282622|ref|ZP_03645944.1| hypothetical protein BbifN4_02239 [Bifidobacterium bifidum NCIMB
           41171]
 gi|310287082|ref|YP_003938340.1| methyltransferase domain [Bifidobacterium bifidum S17]
 gi|313139781|ref|ZP_07801974.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171]
 gi|309251018|gb|ADO52766.1| Conserved hypothetical protein with methyltransferase domain
           [Bifidobacterium bifidum S17]
 gi|313132291|gb|EFR49908.1| 16S RNA methylase RsmC [Bifidobacterium bifidum NCIMB 41171]
          Length = 217

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   +LDLG G G V LAL   SP      VD++ +AL++ ++NA +NG        
Sbjct: 70  EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGCEHIHAAS 129

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                + +   FD I SNPP    +  D L   +  + PR++  G    L   + +    
Sbjct: 130 PEQVPADL--TFDAIWSNPPI--RIGKDALHDLLMTWLPRLTPAGAAY-LVVQKNL---G 181

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +  L      +  +G +   +V +   ++   ++   +
Sbjct: 182 ADSLIP--WLATALGDDY--EVSKYHSAKGYRVIEVLR 215


>gi|212637878|ref|YP_002314398.1| methyltransferase [Anoxybacillus flavithermus WK1]
 gi|212559358|gb|ACJ32413.1| Methyltransferase (UbiE/COQ5 family) [Anoxybacillus flavithermus
           WK1]
          Length = 244

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL +                 ++DL TG 
Sbjct: 6   ERLDYLLAE----DMKIIQSPSVFAFSLDAVLLANFVYVPI-------QKGNLVDLCTGN 54

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G + L L K +   K VGV+I  K  ++AK +   N + ++ + +  D            
Sbjct: 55  GVIPLLLSKRTKG-KIVGVEIQEKIYDMAKRSVQYNELEKQIEIIHGDIKHMPAYLGHSK 113

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           FDV+  NPPY  +   + +       +   +   +L            +    S+ L + 
Sbjct: 114 FDVVTCNPPYFPTPNEEEINKNEHFAIARHEIYCTL----------EDVIRVSSQLLKQG 163

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D+V +    +L
Sbjct: 164 GKAAFVHRPERLLDIVTLMRQYRL 187


>gi|291458687|ref|ZP_06598077.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418604|gb|EFE92323.1| putative N-6 adenine-specific DNA methylase [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 243

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 21/189 (11%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              R+   S+ F    +  LL + AL         R+  ++LDLGTGTG + L L  ++ 
Sbjct: 11  RGFRIIQDSEGFCFGMDAVLLANYALPAV------REGSQLLDLGTGTGVIPLLLSAKTK 64

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIE 176
             +  G++I   A ++A+ +A  NG   R   L+ D        +    D+++SNPPY++
Sbjct: 65  ARRLYGLEIQKSAADLAERSAALNGQEGRIQILRGDIRRIRDFPLSSRMDLVLSNPPYLK 124

Query: 177 SVIVDCLGL-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           S I       ++   +           L  +R +A   S  L   G   +     +  D+
Sbjct: 125 SGIRSKGEGRQIARHEI----------LCSFRDVAVAASYLLKASGRFFLVHRAERLTDI 174

Query: 236 VRIFESRKL 244
           V       L
Sbjct: 175 VSDLRESGL 183


>gi|297582440|ref|YP_003698220.1| methyltransferase small [Bacillus selenitireducens MLS10]
 gi|297140897|gb|ADH97654.1| methyltransferase small [Bacillus selenitireducens MLS10]
          Length = 201

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 38/193 (19%)

Query: 63  VRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +  T+    F        + LL++S         E      +LD+G G G + +AL   +
Sbjct: 28  LTFTVDKGVFSGGGVDFGSRLLIESF-------TEPETEGDLLDIGCGWGPIGIALAMST 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
              +   +D++ +++E+A+ NA  NGV++     Q D    + G     I++NPP     
Sbjct: 81  DQRRINMIDVNERSVELARLNAEANGVADNVHIEQRDATEGLPGDGCAAILTNPPIRA-- 138

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G      I +  SR L   G   V I   Q       
Sbjct: 139 -----------------------GKDVVFAIYEEASRQLKHGGELWVVIQKKQGAPSTEE 175

Query: 238 IFESRKLFLVNAF 250
             ++  L  V   
Sbjct: 176 KLKALGL-DVRTV 187


>gi|149376592|ref|ZP_01894352.1| nucleotide methyltransferase [Marinobacter algicola DG893]
 gi|149359110|gb|EDM47574.1| nucleotide methyltransferase [Marinobacter algicola DG893]
          Length = 380

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 33/168 (19%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F   +L + S    P      +++  +A   P        R++DLG G G + L  L 
Sbjct: 205 AVFARGKLDIGSRLLLP------VIERMVADLPP------GARVMDLGCGNGVLGLTALA 252

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +P  +    D+S +A+  A+ N  T           SD      G +D+++ NPP+   
Sbjct: 253 RNPALEVAFADVSSQAVASARHNVQTAFPGAVASFYHSDGIPEAAGRYDLVLLNPPF--- 309

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +      GG+ G      +   V+ HL+  G   +
Sbjct: 310 ------------HE------GGVVGDHIALRLFSQVAGHLSPGGCMLL 339


>gi|221121476|ref|XP_002156231.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 212

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 10/180 (5%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVD 128
             +EP  +T LL+D+ L      ++ +  +  L++G+G+G V   L K +      +  D
Sbjct: 17  SIYEPSEDTFLLIDT-LEKEQHILKSQKPLICLEVGSGSGVVITFLAKITENKSFYIATD 75

Query: 129 ISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           I+  A   +K     N V      D+  S     ++G  D+++ NPPY+ +        E
Sbjct: 76  INLNACICSKKTGHENNVYVETHCDSFASSMMQRLQGNIDILLFNPPYVLTP-----SEE 130

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIFESRKLF 245
           +   D   +  GG DG              L+  G    V I  N+  +++         
Sbjct: 131 IGKKDISAAWAGGKDGREVIDKFLPQAINLLSPAGFFYIVLIKENKPYEIISFMHDNGFH 190


>gi|222529538|ref|YP_002573420.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           bescii DSM 6725]
 gi|254782825|sp|B9MJY9|PRMA_ANATD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|222456385|gb|ACM60647.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 304

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 39/160 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + +LD+GTG+G + +A  K+    + + VDI   A+++A+ NA  NGV    +  ++
Sbjct: 167 KPGMDVLDVGTGSGILAIA-AKKFLARRVLAVDIDEVAVKVAEENARLNGVE--IEIKKN 223

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +E  FDV+V+N                      ++             ++  V +
Sbjct: 224 DLVEGIEEKFDVVVAN---------------------IVA--------DIIMRLSRDVKK 254

Query: 216 HLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            L  D +      +E   ++  DV++ FE   L +V   K
Sbjct: 255 VLKDDRIFISSGIIE---DRLEDVLKSFEKNSLEIVEVKK 291


>gi|86130776|ref|ZP_01049375.1| methyltransferase [Dokdonia donghaensis MED134]
 gi|85818187|gb|EAQ39347.1| methyltransferase [Dokdonia donghaensis MED134]
          Length = 272

 Score = 79.8 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L L +         V++   A E A  N   +   +R     +  
Sbjct: 39  PDSILDIGTGTGVIALMLAQRCDAQTIDAVELDDNAYEQATENFENSDWGDRLFCYHAHL 98

Query: 158 FS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR------- 207
           +     V+  +D+IV NPP+    +       ++  +   +     D     R       
Sbjct: 99  YEFAAEVDDEYDLIVCNPPFYTEDLTQASQDALK--EKSQNDGAAQDAREQARFESAMPF 156

Query: 208 -TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             +   V++ L+ +G  +V I Y ++ D + +    +L     
Sbjct: 157 ELLVGAVAKLLSPEGTFNVIIPYEREEDFILLCSRAQLAPTRI 199


>gi|312132197|ref|YP_003999537.1| methyltransferase small [Leadbetterella byssophila DSM 17132]
 gi|311908743|gb|ADQ19184.1| methyltransferase small [Leadbetterella byssophila DSM 17132]
          Length = 229

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 15/186 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             + R   ++  DS L  +L  IE  D  R LD+GTGTG + L + + +P      V+I 
Sbjct: 9   VRQERSAMKVCTDSCLFGAL--IEASDAKRALDIGTGTGLLSLMVAQRNPSLIIDAVEID 66

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
             A++ A  N + +  + R      D    V    ++VI  NPP+ E+ +          
Sbjct: 67  SGAVQDATENVLDSPFASRIKVFYEDIKDFVPKEKYEVIFCNPPFYENRLSSP------- 119

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI---FESRKLFL 246
            DP+ +L      L  ++ +++   R L +DG   + +   +          +++ K +L
Sbjct: 120 -DPKKNL-AHHASLLKWKEVSECAKRLLAEDGKLWLLLPPFEMEQFRSQSPEWQTEKQYL 177

Query: 247 VNAFKD 252
           +   KD
Sbjct: 178 IRHRKD 183


>gi|238794780|ref|ZP_04638382.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           intermedia ATCC 29909]
 gi|238725860|gb|EEQ17412.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           intermedia ATCC 29909]
          Length = 347

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGDVTVKTLPGVF---SRDSL--DSGSHLLLSTFSEPFKGNVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAELLIRGATAHLHVGGKL 299


>gi|322385787|ref|ZP_08059431.1| methyltransferase [Streptococcus cristatus ATCC 51100]
 gi|321270525|gb|EFX53441.1| methyltransferase [Streptococcus cristatus ATCC 51100]
          Length = 248

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  +S+ F         VDS L    P++ KR +  I+DL  G GAV L        
Sbjct: 19  DIKIIQNSEVFSYS------VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGL-FASTRTQ 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +  D     + + G   D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAQRSIELNHLTQQMQVIHDDLKNLGAYISGSKVDIILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++    ++ +
Sbjct: 130 DEHSNLNGSEHYLLARHEVATNL----------EEICTIAQRVLKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILETMKNHNL 190


>gi|291457545|ref|ZP_06596935.1| putative methyltransferase small domain protein [Bifidobacterium
           breve DSM 20213]
 gi|291380598|gb|EFE88116.1| putative methyltransferase small domain protein [Bifidobacterium
           breve DSM 20213]
          Length = 222

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 15/107 (14%)

Query: 82  VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  V   +LDLG G G + LAL   SP      VD++ +ALE+   N
Sbjct: 46  VDLGTSVLLKHAPEPPVSGNVLDLGCGWGPIALALAFASPEANVWAVDVNERALELTHVN 105

Query: 141 AVTNGVSE----RFD--------TLQSDWFSSVEG--LFDVIVSNPP 173
           A  NG       + D          QS     + G   FD I SNPP
Sbjct: 106 AEANGCRNIHTTQVDETSTPLPADRQSAHCEPIPGDLTFDAIWSNPP 152


>gi|291562843|emb|CBL41659.1| Predicted O-methyltransferase [butyrate-producing bacterium SS3/4]
          Length = 245

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 17/139 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LDLGTGTG + L L  ++       ++I  +   +A+ +   N + E+ + +  
Sbjct: 44  KPGERVLDLGTGTGIIPLLLSAKTEGEHFSALEIQDEIARMAERSIKLNHLEEKIEIVHG 103

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRT 208
           D   +        FDV+ +NPPY+          EV+     +   +L            
Sbjct: 104 DIKEASRIFGAASFDVVTTNPPYMNDAHGLKNPTEVKAISRHEVLCTL----------ED 153

Query: 209 IADGVSRHLNKDGLCSVEI 227
           +    ++ L   G   +  
Sbjct: 154 VVREGAKVLKPGGRMYMVH 172


>gi|238756520|ref|ZP_04617824.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
           ATCC 29473]
 gi|238705275|gb|EEP97688.1| Ribosomal RNA small subunit methyltransferase C [Yersinia ruckeri
           ATCC 29473]
          Length = 346

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS     L    +    R+LD+G G G +   L K+SP  K    D+S  A++ +++   
Sbjct: 182 DSGSYLLLSTFNEPFKGRVLDVGCGAGVLASVLAKQSPKIKWTLSDVSAAAIDASRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    + + S+ +S ++G FD+I+SNPP+ + +       E+               
Sbjct: 242 ANDIEA--EVIASNVYSDIQGRFDMIISNPPFHDGLQTSFHAAEM--------------- 284

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +  G + HL+  G  
Sbjct: 285 ------LIRGATGHLHVGGKL 299


>gi|197301950|ref|ZP_03167014.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC
           29176]
 gi|197299018|gb|EDY33554.1| hypothetical protein RUMLAC_00672 [Ruminococcus lactaris ATCC
           29176]
          Length = 253

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L    D F    +  LL D A        + R    +LD+GTG G + + L  ++  
Sbjct: 25  GLGLIQDPDKFCFGVDAVLLSDFA--------KVRQGETVLDMGTGNGIIPVLLAGKTEG 76

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
               G++I     E+A+ +   N + +R + +  D   +        FDVI +NPPY+ +
Sbjct: 77  KHFTGLEIQADTAEMAQRSVRYNHLEDRVEIVTGDIKEAATIFKPAFFDVITTNPPYMLA 136

Query: 178 VIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   +   +   +   +LD           I     R L   G   +  
Sbjct: 137 EHGLRNPDDRKAIARHEVLCTLD----------DILRESMRLLQDKGRFYMIH 179


>gi|261346502|ref|ZP_05974146.1| ribosomal RNA small subunit methyltransferase [Providencia
           rustigianii DSM 4541]
 gi|282565493|gb|EFB71028.1| ribosomal RNA small subunit methyltransferase [Providencia
           rustigianii DSM 4541]
          Length = 337

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 30/169 (17%)

Query: 57  WRDFYNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR++    + ++     F         +D      L  + +     +LDL  G G +   
Sbjct: 159 WRNYQLDNVVVNALPGVFSNSE-----LDIGSDLLLSTLTEPMNGNVLDLACGNGVLAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +  ++P       D+S  AL+ A +    N ++ +   + SD +S +   FD I+SNPP+
Sbjct: 214 VGSQNPNVTLTLSDVSSAALDSATATLAANKLTGKI--IPSDVYSEINDKFDWIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG     +   T+     ++L K G  
Sbjct: 272 H---------------------DGINTSYNAVETLISHAPKYLKKGGRL 299


>gi|284800547|ref|YP_003412412.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578]
 gi|284993733|ref|YP_003415501.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923]
 gi|284056109|gb|ADB67050.1| hypothetical protein LM5578_0294 [Listeria monocytogenes 08-5578]
 gi|284059200|gb|ADB70139.1| hypothetical protein LM5923_0293 [Listeria monocytogenes 08-5923]
          Length = 201

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 30/161 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    +ILD+G G G + L + K  P  +   VD++ +ALE+AK NA  N  +      +
Sbjct: 57  ETKTGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKENAGINKTTNT-HIYE 115

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S  + +V    +  I+SNPP                            G      I +G 
Sbjct: 116 SSVYDNVTANDYQAIISNPPIRA-------------------------GKKVVHAILEGA 150

Query: 214 SRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF-KD 252
             HL + G   + I   Q      +  E      V    KD
Sbjct: 151 YDHLQETGELWIVIQKKQGGPSAEKKMEEV-FGNVETVAKD 190


>gi|295102911|emb|CBL00456.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Faecalibacterium prausnitzii L2-6]
          Length = 304

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 74/190 (38%), Gaps = 25/190 (13%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPETELLV-DSALAFSLPRIEK------------RD 97
           GWR +Y+      RL +     +   +   L+ D  LAF     E             + 
Sbjct: 108 GWRKYYHPMDVGQRLAIVPSWQDYDTDRVKLILDPGLAFGTGGHETTNLCLEVLDERVKG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A   +       GVDI   A+  A  NA  NGV+++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIA-ALKLGAAVAEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                G +D+I +N   I +  +  L   V      ++ D          +  D V   L
Sbjct: 227 SDKASGKYDIITAN---IVANAIMSLAPAVPG---LMADDAVFIASGIIDSRKDEVIAAL 280

Query: 218 NKDGLCSVEI 227
              GL  +E+
Sbjct: 281 EAAGLAVLEV 290


>gi|156358210|ref|XP_001624416.1| predicted protein [Nematostella vectensis]
 gi|156211194|gb|EDO32316.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 15/153 (9%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             LV  A      +      ++ L++G G GA+ +    + P  +    DI+  A+E   
Sbjct: 55  NELVSVAHGLLKQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWF--SSVEG-LFDVIVSNPP--YIESVIVDCLGLEVR-DFDP 192
            NA  +GV      +Q+D F    ++G  FD+I    P  + E      L +  R  +DP
Sbjct: 115 ENACLHGVENSVTAIQADVFDCDGLKGMKFDMIFFRQPGAFREDCDEKDLDMLARTVWDP 174

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S       G    L   G   +
Sbjct: 175 N---------YSVIERYLKGARGFLGNGGKLLL 198


>gi|297243699|ref|ZP_06927630.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD]
 gi|296888450|gb|EFH27191.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis AMD]
          Length = 233

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 16/163 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +  + LD+G G G + +A+  ESP  + V VD++ +ALE+ + NA   G+     +L
Sbjct: 79  KPPENGKFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSL 138

Query: 154 QSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             D       L    FD+I SNPP    V  + L   +  + PR+   GG   L   + +
Sbjct: 139 VDDALKENNTLEFNNFDLIWSNPPI--RVGKEMLHDILMTWIPRLK-VGGAAYLVVQKNL 195

Query: 210 -ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            +D +   L ++      +G N   +V +   S+   ++   K
Sbjct: 196 GSDSLIPWLAEN------LGENY--NVEKYASSKGYRIIEVLK 230


>gi|323486486|ref|ZP_08091809.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163]
 gi|323694373|ref|ZP_08108546.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673]
 gi|323400189|gb|EGA92564.1| methyltransferase type 11 [Clostridium symbiosum WAL-14163]
 gi|323501613|gb|EGB17502.1| methyltransferase type 11 [Clostridium symbiosum WAL-14673]
          Length = 245

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 17/139 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   + LDLGTGTG + + L  ++      G++I  +  ++A  +   NG+ +R D ++ 
Sbjct: 44  RPGEKALDLGTGTGIIPILLEAKTKGEHFTGLEIQEEMADMASRSVELNGLKDRIDIIRG 103

Query: 156 DWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRT 208
           D   +        FDV+ +NPPY+          E +     +   +LD           
Sbjct: 104 DIKEAGLIFGGASFDVVTTNPPYMNDCHGLKNPDEAKAIARHEVLCTLD----------D 153

Query: 209 IADGVSRHLNKDGLCSVEI 227
           +    +R L   G   +  
Sbjct: 154 VVREGARVLRPGGRFYMVH 172


>gi|256027339|ref|ZP_05441173.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           D11]
 gi|289765308|ref|ZP_06524686.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11]
 gi|289716863|gb|EFD80875.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D11]
          Length = 213

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + VG+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELVGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANEALQLNKIEKNIQFECIDIREYRKSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL+           +     R L   G        ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLN----------ELISNAKRLLKPIGFLYFIHRTHRLVEIIKALDKNNFSIK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|167760309|ref|ZP_02432436.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704]
 gi|167662192|gb|EDS06322.1| hypothetical protein CLOSCI_02682 [Clostridium scindens ATCC 35704]
          Length = 246

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  S   F    +  LL       S   ++K +    LDLG+GTG + + L  ++  
Sbjct: 18  GYEIIQSPGRFCFGMDAILL------SSFATVKKNETA--LDLGSGTGILPILLEAKNEG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
               G++I  ++ ++A+ +   N + ++ D +  D   +        F VI +NPPY+  
Sbjct: 70  AHYTGLEIQEESADMARRSVRHNHLQDKVDIITGDIKEASAIFGAASFHVITTNPPYMIG 129

Query: 178 VIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   E       +   +LD           I    +R L   G   +  
Sbjct: 130 DHGLKNENEALYIARHEVLCTLD----------DILRESARLLKPKGRFYMIH 172


>gi|163841474|ref|YP_001625879.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
 gi|162954950|gb|ABY24465.1| methyltransferase [Renibacterium salmoninarum ATCC 33209]
          Length = 544

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 59/169 (34%), Gaps = 20/169 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A         +    R LDLGTG G     LL+          
Sbjct: 135 RPGVL--RHDHVLGIGQASLTLAQTTTRAPADRALDLGTGCGIQTFHLLRHVR--HVTAT 190

Query: 128 DISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           DIS +AL   + N + N          +  R           V G  FD+IVSNPP++ +
Sbjct: 191 DISERALAFTRFNLLLNATALAVDPTDLEHRVSLRLGSLLEPVRGQRFDLIVSNPPFVIT 250

Query: 178 VIVD-CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              D  L  +   +      DGG+ G     ++   +   L + G   +
Sbjct: 251 PRYDGELSADQFTY-----RDGGLPGDEIVSSLVRALPDALVEGGTAQL 294


>gi|146417493|ref|XP_001484715.1| hypothetical protein PGUG_02444 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 223

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 10/194 (5%)

Query: 66  TLSSDTFEPRPETELLVDSALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           TL  + +EP  ++ LL+D        L       V  + ++G G+G V   + +    + 
Sbjct: 9   TLDLNVYEPAEDSFLLLDCLEQDQHYLKLHLNTSVPIVSEIGAGSGIVIAFIKRHLYPWG 68

Query: 124 GVG-VDISCKALEIAKSNAVTN--GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                D++  A +   +    N  GV   +D  Q D  +++     D++V NPPY+ +  
Sbjct: 69  IYIPTDVNPHACQAVLATLKKNSGGVPLIYDVCQMDCTTAIRSQCLDLLVFNPPYVPAEA 128

Query: 180 VDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVV 236
           V        D +  +  +L GG DG+     +   +S  L  +G+  +     N+  +V 
Sbjct: 129 VPA-TPNTLDDETWLDLALLGGDDGMEVTWRVLKNLSSILAPNGIAYILFCARNKPKEVC 187

Query: 237 RIFESRKLFLVNAF 250
               S+        
Sbjct: 188 LYMRSQGWLAEEVI 201


>gi|145300504|ref|YP_001143345.1| O-methyltransferase [Aeromonas salmonicida subsp. salmonicida A449]
 gi|262827853|sp|A4SRS5|TRMN6_AERS4 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|142853276|gb|ABO91597.1| predicted O-methyltransferase [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 236

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 10/135 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                +  R+LD+GTG+G V L L +          VD+   A   A+ N   +    R 
Sbjct: 33  WAPVAETRRVLDIGTGSGLVALMLAQRSRSDCIIDAVDLDMNAATQARENVAASPWETRI 92

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           + ++          +D+IVSNPPY  +         +RD  P  +L      L   R + 
Sbjct: 93  NIMEGAIQDYQATPYDLIVSNPPYFGAG------QSLRD--PARALARHTGSLD-SRDLL 143

Query: 211 DGVSRHLNKDGLCSV 225
               R L   G  ++
Sbjct: 144 AACDRLLTPVGQVAL 158


>gi|314969926|gb|EFT14024.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA1]
          Length = 206

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP--------IRVGKAALHEILTTW---------LTRLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|114565621|ref|YP_752775.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336556|gb|ABI67404.1| SAM-dependent methyltransferases [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 251

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 21/190 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+ R      +D+ L    P ++   + + +DLGTG G + L L   +P  +  G++I  
Sbjct: 26  FQSREGYRFSLDAILLAHFPVLDG--IKQAVDLGTGNGVIALLLAYRAPSLRVTGIEIQE 83

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV----IVSNPPYIESVI-VDCLGLE 186
             ++ A+ N   N + ER D +Q+D  +  E L       +VSNPP+ +       L  E
Sbjct: 84  SMIKRARKNIAFNHLEERIDLIQADIKNIKEYLPPQGAELVVSNPPFWKKGEGKLSLNPE 143

Query: 187 --VRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             V   +           L      +    +  L   G   +     +  ++ R+F +  
Sbjct: 144 KAVARHE-----------LEVELADLVRAAAYILLPRGCFCLIQRAERLQEIARLFSANG 192

Query: 244 LFLVNAFKDY 253
           L L      Y
Sbjct: 193 LVLRRIRPVY 202


>gi|293391527|ref|ZP_06635861.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952061|gb|EFE02180.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 232

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 16/161 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   +ILDLG G+G + L L +  S   +   V+I   A + A+ N   +   ++ 
Sbjct: 29  WANVTQAKQILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKI 88

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D     +  + +FD+IV+NPPY ++ +      E R+    ++    +  L    
Sbjct: 89  QVYQQDIETFCAQSKHVFDLIVANPPYFQTGV--DCRNEARNTARYLASQSHLHWL---- 142

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
              +     L   G  S  + +        + ++  L+ V 
Sbjct: 143 ---ETAVSCLASKGKISFVLPFEAGE---TLLKTTALYCVE 177


>gi|258648434|ref|ZP_05735903.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259]
 gi|260851184|gb|EEX71053.1| SAM-dependent methyltransferase [Prevotella tannerae ATCC 51259]
          Length = 232

 Score = 79.8 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 15/161 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
               +   RILD+GTG+G + L L + +      G++I   +   A+ N   +  ++R  
Sbjct: 31  WANVKGKRRILDIGTGSGLIALMLAQRT-DAMITGIEIDPASAAQAQENVAASPWADRLQ 89

Query: 152 TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPR--ISLDGGIDGLSHYRT 208
            + +D         FD+IVSNPP+   +    L  +      R   +L         +  
Sbjct: 90  IVATDIAGYTSYQAFDLIVSNPPFFNEM---LLPPDAARSQARHTQALT--------FEA 138

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +   V R L+ +G     +             ++ LF+V+ 
Sbjct: 139 LLFHVGRLLSPEGSFCAILPATALTHFSSAAAAQALFVVHT 179


>gi|323490974|ref|ZP_08096168.1| hypothetical protein GPDM_16436 [Planococcus donghaensis MPA1U2]
 gi|323395330|gb|EGA88182.1| hypothetical protein GPDM_16436 [Planococcus donghaensis MPA1U2]
          Length = 245

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 79/219 (36%), Gaps = 32/219 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++R+  S   F    +  LL   A               I+DL TG 
Sbjct: 6   ERLDYLLAE----DLRIIQSPSVFSFSLDAVLLARFAYVPL-------KRGTIVDLCTGN 54

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           GA+ L L       + +GV++  +   +A+ +   N + ++ + ++ D     +      
Sbjct: 55  GAIPLFL-SARTESRIIGVELQERLAHMARRSIAYNELEKQIEIIEGDVKDMPKQLGFEK 113

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY  +  +        + +   +  ++LD                S+ L + 
Sbjct: 114 YDVVTCNPPYFPAHEMSDKNISEHMAIARHELHLTLD----------EAVQAASQLLKQG 163

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY--GGND 257
           G  +      + +D++    + +L        Y   G +
Sbjct: 164 GKAAFVHRAGRLIDLMAAMRANRLEPKRIRLVYPKAGKE 202


>gi|157368894|ref|YP_001476883.1| 16S ribosomal RNA m2G1207 methyltransferase [Serratia
           proteamaculans 568]
 gi|226712980|sp|A8G9G5|RSMC_SERP5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157320658|gb|ABV39755.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans
           568]
          Length = 347

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 31/170 (18%)

Query: 57  WRD---FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W +    +++ +      F  R      +D   +  L  ++K    ++LD+G G G +  
Sbjct: 158 WWESYQLHDLEVKTLPGVFS-RDG----LDVGSSLLLSTLDKHMKGKVLDVGCGAGVMAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K SP  K    D++  A+E +++    NG+    + + S+ +S + G FD+I+SNPP
Sbjct: 213 VLSKLSPKMKLTLSDVNAAAIESSRATLAANGIEG--EVIVSNVYSDITGRFDLIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+   T+  G  +HL   G  
Sbjct: 271 FH---------------------DGLQTSLTAAETLIRGALKHLGVGGKL 299


>gi|225570059|ref|ZP_03779084.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM
           15053]
 gi|225161529|gb|EEG74148.1| hypothetical protein CLOHYLEM_06155 [Clostridium hylemonae DSM
           15053]
          Length = 245

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 62/170 (36%), Gaps = 19/170 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +     TF    +  LL              R+    LDLGTGTG + + L  ++  
Sbjct: 18  GYEIIQKPGTFCFGMDAVLL--------SSFASVREGEAALDLGTGTGILPILLEAKNEG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            +  G++I  ++ ++A+ + + NG+ ++ D +  D   +        F VI +NPPY+  
Sbjct: 70  SRYAGLEIQEESADMARRSILHNGLEDKIDIVTGDIREAAGLFGAASFHVITTNPPYMIG 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   E        +L    D       I    ++ L   G   +  
Sbjct: 130 DHGLKNDKEALYIARHEALVSLED-------ILRESAKILRPKGRFYMVH 172


>gi|332559213|ref|ZP_08413535.1| methyltransferase small [Rhodobacter sphaeroides WS8N]
 gi|332276925|gb|EGJ22240.1| methyltransferase small [Rhodobacter sphaeroides WS8N]
          Length = 253

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT      +PR       D  L      +       +L+LG G G   L L    
Sbjct: 12  FLGGRLT----VLQPRRGYRAATDPVL--LAAAVPASAGQSVLELGCGAGVASLCLAARV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIE 176
           P  +  G+++      +A+ NA  NGV+   + ++ D     +++   FD +++NPPY  
Sbjct: 66  PGLRLAGLELQPAYAALARENAAMNGVA--LEVVEGDLSAMPAALRQSFDHVIANPPYYP 123

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               +   D         +  ++            T  +   R L   G+ S+  G ++ 
Sbjct: 124 AGGGTGAADPGRERAMREETPLA------------TWVEAAVRRLAPRGVLSLIFGADRL 171

Query: 233 VDVVRIFESR 242
            D +   + R
Sbjct: 172 PDALAALDGR 181


>gi|225850601|ref|YP_002730835.1| methyltransferase small [Persephonella marina EX-H1]
 gi|225646244|gb|ACO04430.1| methyltransferase small [Persephonella marina EX-H1]
          Length = 246

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 19/150 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS +  S P I K+   +I+DLGTG+G + + L  + P  +   ++I     ++AK N 
Sbjct: 30  IDSVILSSFPEITKKKG-KIIDLGTGSGIILILLSLKYPDLEFHAIEIQEDLFDMAKRNF 88

Query: 142 VTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRIS 195
             N V    + ++ D            FD +++NPPY +         E  +  ++    
Sbjct: 89  ELNRV--NVNLIKGDIKDIKKLYQPQYFDYVITNPPYFKKEFTQKASQEEKIARYEIT-- 144

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   +         S  L   G   +
Sbjct: 145 --------ATVEDFIKAGSYLLKDKGRFYM 166


>gi|237739012|ref|ZP_04569493.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           2_1_31]
 gi|229423612|gb|EEO38659.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           2_1_31]
          Length = 222

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 74/191 (38%), Gaps = 19/191 (9%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           ++      ++   +T LL      +    + KR++ ++LD+GTG G + + L       +
Sbjct: 16  KIIQKKGGYKYAEDTILL----FNYLKKSLSKRNI-KLLDIGTGNGILPILLSDNDMIEE 70

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDC 182
            VG+DI  + +E A      N + +  +    D         FDV++SNPPY+E      
Sbjct: 71  IVGIDIQNENIERANKALELNKIEKNINFTCLDVKEYKNANYFDVVISNPPYMEDNGKKI 130

Query: 183 LGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
              E R     + +++LD                 R L   G        ++ +++++  
Sbjct: 131 NENEHRALSRHEIKLNLD----------EFIQNAKRLLKPIGTLYFVHRTHRLIEIIKTL 180

Query: 240 ESRKLFLVNAF 250
           +  K  +    
Sbjct: 181 DKNKFSIKKII 191


>gi|149597718|ref|XP_001521263.1| PREDICTED: similar to HEMK homolog, partial [Ornithorhynchus
           anatinus]
          Length = 182

 Score = 79.4 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 10/119 (8%)

Query: 147 SERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +R   +  D  S +        G  D++VSNPPYI    +  L  E+  ++   +LDGG
Sbjct: 64  QDRIKIIHHDISSRMNWQQLIPWGPVDLVVSNPPYIFQSDMAHLAAEILSYEDPDALDGG 123

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFKDYGG 255
            DG+   R I       L   G   +E+       V      +    L L     D+ G
Sbjct: 124 EDGMKVIRDILSLTPWLLKIFGSVFLELDPRHPELVGNWLAKQPDLFLSLSATHTDFCG 182


>gi|269137833|ref|YP_003294533.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|267983493|gb|ACY83322.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|304557888|gb|ADM40552.1| Ribosomal RNA small subunit methyltransferase C [Edwardsiella tarda
           FL6-60]
          Length = 378

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F  R      +D      L  +       +LD+G G G +  A+ + SP 
Sbjct: 198 SLRIATLPGVFS-RDG----LDIGSHLLLSSLPHGLKGNVLDVGCGAGVLSAAIARMSPE 252

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D++  AL  ++     N +    + L S+ FS + G FD+I+SNPP+       
Sbjct: 253 TRLTLSDVNAAALTASRQTLAQNAIDG--EVLASNVFSDISGRFDLIISNPPFH------ 304

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G   HL   G  
Sbjct: 305 ---------------DGVQTSLLAAQTLIRGAVSHLQLGGEL 331


>gi|50843267|ref|YP_056494.1| hypothetical protein PPA1810 [Propionibacterium acnes KPA171202]
 gi|289424993|ref|ZP_06426772.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|50840869|gb|AAT83536.1| conserved protein [Propionibacterium acnes KPA171202]
 gi|289154692|gb|EFD03378.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|313763187|gb|EFS34551.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA1]
 gi|313793309|gb|EFS41367.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA1]
 gi|313801048|gb|EFS42316.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA2]
 gi|313816523|gb|EFS54237.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA1]
 gi|313828417|gb|EFS66131.1| methyltransferase small domain protein [Propionibacterium acnes
           HL063PA2]
 gi|313838000|gb|EFS75714.1| methyltransferase small domain protein [Propionibacterium acnes
           HL086PA1]
 gi|314914384|gb|EFS78215.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA4]
 gi|314917707|gb|EFS81538.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA1]
 gi|314919565|gb|EFS83396.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA3]
 gi|314930156|gb|EFS93987.1| methyltransferase small domain protein [Propionibacterium acnes
           HL067PA1]
 gi|314957173|gb|EFT01277.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA1]
 gi|314957814|gb|EFT01917.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA1]
 gi|314963492|gb|EFT07592.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA1]
 gi|315077221|gb|EFT49286.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA2]
 gi|315097934|gb|EFT69910.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA2]
 gi|315100699|gb|EFT72675.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA1]
 gi|315106087|gb|EFT78063.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA1]
 gi|315109180|gb|EFT81156.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA2]
 gi|327451553|gb|EGE98207.1| methyltransferase small domain protein [Propionibacterium acnes
           HL092PA1]
 gi|328752054|gb|EGF65670.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA1]
 gi|328755549|gb|EGF69165.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA2]
          Length = 206

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP--------IRVGKAALHEILTTW---------LTRLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|283783064|ref|YP_003373818.1| methyltransferase small domain protein [Gardnerella vaginalis
           409-05]
 gi|298253512|ref|ZP_06977302.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1]
 gi|283441356|gb|ADB13822.1| methyltransferase small domain protein [Gardnerella vaginalis
           409-05]
 gi|297532279|gb|EFH71167.1| 16S RNA G1207 methylase RsmC [Gardnerella vaginalis 5-1]
          Length = 232

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 16/163 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +  + LD+G G G + +A+  ESP  + V VD++ +ALE+ + NA   G+     +L
Sbjct: 79  KPPENGKFLDIGCGWGPISIAMGLESPEAEIVAVDVNERALELTELNAKNAGLKHIRTSL 138

Query: 154 QSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             D       L    FD+I SNPP    V  + L   +  + PR+   GG   L   + +
Sbjct: 139 VDDALKENNTLEFNNFDLIWSNPPI--RVGKEMLHDILMTWIPRLK-VGGAAYLVVQKNL 195

Query: 210 -ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            +D +   L ++      +G N    V +   S+   ++   K
Sbjct: 196 GSDSLIPWLAEN------LGENY--IVEKYASSKGYRIIEVIK 230


>gi|327332267|gb|EGE74003.1| putative methyltransferase small domain protein [Propionibacterium
           acnes HL097PA1]
          Length = 206

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKVLRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP--------IRVGKAALHEILTTWLA---------RLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|67590136|ref|XP_665463.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54656165|gb|EAL35233.1| hypothetical protein Chro.40428 [Cryptosporidium hominis]
          Length = 254

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-------ESPF 121
            + +EP  ++  L++ AL      I K     I ++G G+G +   LLK       E P 
Sbjct: 13  ENVYEPSEDSF-LMEDALILEKNEILKVKPRLICEIGCGSGYLTACLLKIIKESDAEFPL 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
                VD++ KALE+++     N ++   + ++   F+ +    GLF++I+ NPPY+ S 
Sbjct: 72  PISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSS 131

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             D L   + +     +  GG++GL   
Sbjct: 132 NKD-LNQSILNCGIDSAWSGGVNGLFFV 158


>gi|302871656|ref|YP_003840292.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574515|gb|ADL42306.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 314

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 60/219 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE------TELLVD--------------SALAFSLPRIEKR 96
           W+ +Y   + +      P  E      ++ +V               + L     +   +
Sbjct: 109 WKKYYK-PVEIGDIVIVPSWEDYKAEDSKTIVRLDPGMAFGTGTHESTVLCLEAIQNYVK 167

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD+GTG+G + +A  K     + + VDI   A+++AK NA  NGV    +  +++
Sbjct: 168 PGMNVLDVGTGSGILAIAAKKLLAK-RVLAVDIDEVAVKVAKENANLNGVE--IEIKKNN 224

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +E  FD++V+N                      ++             ++  V+R 
Sbjct: 225 LVEGIEEKFDIVVAN---------------------IVA--------DIIIRLSTYVNRV 255

Query: 217 LNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   G+      +E   N+  DV++ F    L +V   K
Sbjct: 256 LKDSGIFISSGIIE---NRLEDVLKSFAKNGLKVVEVKK 291


>gi|58336710|ref|YP_193295.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM]
 gi|58254027|gb|AAV42264.1| hypothetical protein LBA0373 [Lactobacillus acidophilus NCFM]
          Length = 206

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 37/177 (20%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++    +  F   R +  + +L+ +    S P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFNTDAGVFSKMRVDYGSGVLIKAMKDISFPK------ANILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P  +   +D++ + L +A+ NA  N + E  +   S+ +  ++    F +I++NPP   
Sbjct: 85  WPDQEVDMIDVNERGLNLARENAKVNNI-ENVNIYASNCYEQIDNDKKFGLILTNPPIRA 143

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                    G      I  G + HL   G+  V I   Q  
Sbjct: 144 -------------------------GKKVVNEILIGANEHLVSGGVLLVVIQKKQGE 175


>gi|326801027|ref|YP_004318846.1| methyltransferase small [Sphingobacterium sp. 21]
 gi|326551791|gb|ADZ80176.1| methyltransferase small [Sphingobacterium sp. 21]
          Length = 241

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     RILD+G+GTG + + + +  P      V+    A +++  N   +    R    
Sbjct: 37  DHPSPNRILDIGSGTGVIAMMMAQRFPHAIIDAVEKDELAAQLSDKNFKNSIFFNRIRAH 96

Query: 154 QSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            + +   +   L+D+IVSNPP+  +         +++ D R S+    D  S YR +   
Sbjct: 97  CTLFQEFAPPALYDLIVSNPPFFLNA--------LQNPDKRKSIARHTDA-SFYRELIQK 147

Query: 213 VSRHLNKDGLCSV 225
               LN  G   +
Sbjct: 148 AWSWLNDGGQLQL 160


>gi|157144490|ref|YP_001451809.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895]
 gi|157081695|gb|ABV11373.1| hypothetical protein CKO_00207 [Citrobacter koseri ATCC BAA-895]
          Length = 219

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++  +A   A+ N   +   +R 
Sbjct: 13  WAPVAGVTRILDIGTGSGLLALMLAQRTDESVTIDAVELDSEAATQAQENIAHSPWPQRI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY E          E   +    +LD        +
Sbjct: 73  TVHTEDVRQWVPRQTARFDLIISNPPYYEQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
             +    +  + ++G   V +         +   S    L     D    +     RVLL
Sbjct: 123 EALLTTAAECITEEGFFCVVLPEQTGNTFTQQALSMGWHL-RLRTDVAETESRLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|227894595|ref|ZP_04012400.1| methyltransferase [Lactobacillus ultunensis DSM 16047]
 gi|227863586|gb|EEJ71007.1| methyltransferase [Lactobacillus ultunensis DSM 16047]
          Length = 214

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 37/177 (20%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +      P+        ILD+GTG G + L   K 
Sbjct: 39  DLKFTTDAGVFSKMRVDYGSGVLIKTMKEVDFPK------NNILDVGTGYGPIGLFAAKF 92

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P  K   VD++ + L++AK NA  N +    +   SD ++ V+    F +I++NPP   
Sbjct: 93  WPDKKVDMVDVNERGLKLAKQNAKVNHIK-NVNIYSSDCYAQVDNDKKFGLILTNPPIRA 151

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                    G      I  G + HL   G+  V I   Q  
Sbjct: 152 -------------------------GKKVVNEILMGANEHLVSGGVLLVVIQKKQGE 183


>gi|311063947|ref|YP_003970672.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010]
 gi|310866266|gb|ADP35635.1| 16S RNA methylase [Bifidobacterium bifidum PRL2010]
          Length = 217

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 67/158 (42%), Gaps = 12/158 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E  +   +LDLG G G V LAL   SP      VD++ +AL++ ++NA +NG        
Sbjct: 70  EPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSNGCEHIHAAS 129

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                + +   FD I SNPP    +  D L   +  + PR++  G    L   + +    
Sbjct: 130 PEQVPADL--TFDAIWSNPPI--RIGKDALHDLLMTWLPRLNPAGAAY-LVVQKNL---G 181

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +  L      +  +G +   +V +   ++   ++   +
Sbjct: 182 ADSLIP--WLATALGDDY--EVSKYHSAKGYRVIEVLR 215


>gi|157150028|ref|YP_001450884.1| DNA methyltransferase signature protein [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157074822|gb|ABV09505.1| DNA methyltransferase signature protein [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 260

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P++ K  +  I+DL  G GAV L        
Sbjct: 31  DVKIIQNREVFSYS------VDSVLLSRFPKLPKSGL--IVDLCAGNGAVGL-FASAHTQ 81

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N + ++   +  D  +          D+I  NPPY + 
Sbjct: 82  AKIIAVEIQERLADMAQRSIQLNQLDQQMQVIHDDLKNLPHYIPCSKVDMIFCNPPYFKV 141

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++    ++ +
Sbjct: 142 DKHSNLNESEHYLLARHEISTNL----------EEICTVAQRVLKSNGRLAMVHRPDRFL 191

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 192 DILDTMKAHNL 202


>gi|291513726|emb|CBK62936.1| Predicted O-methyltransferase [Alistipes shahii WAL 8301]
          Length = 226

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 15/162 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +   +  +D  R+LD+GTGTG + L L + +P     GVDI    +  A+ NA 
Sbjct: 6   DGVLLGAWAAVRPQDR-RMLDIGTGTGLIALMLAQRAPEAHVTGVDIDD--VGQARENAA 62

Query: 143 TNGVSERFDTLQSDWFS-SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGI 200
            +  S R    Q           FD+IVSNPP +++S+     G         +      
Sbjct: 63  ASPWSGRVAFAQCPVQEFETPEPFDLIVSNPPFFVDSLTCPDRGRTAARHAVHL------ 116

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                 R   D V R L   G  +V +   +    + +   R
Sbjct: 117 -PFGDLR---DAVLRLLAPGGRFAVILPTAEAERFLAVCAGR 154


>gi|260494434|ref|ZP_05814564.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_33]
 gi|260197596|gb|EEW95113.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_33]
          Length = 225

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + VG+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSNNEFLSELVGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANKALQLNKIEKNIQFECIDIREYRKSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL+           +     R L   GL       ++ V+++++ +     + 
Sbjct: 139 SRHEIKLSLN----------ELISNAKRLLKPIGLLYFIHRTHRLVEIIKVLDKNNFSIK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|153853634|ref|ZP_01995014.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814]
 gi|149753789|gb|EDM63720.1| hypothetical protein DORLON_01005 [Dorea longicatena DSM 13814]
          Length = 248

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  S   F         +D+ L  +  R++K +  + LDLGTGTG + + L  + P 
Sbjct: 18  GYEIIQSPGRFCFG------MDAVLLSAFARVKKNE--KALDLGTGTGILPILLEAKYPG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I  ++ ++A+ +   NG+ ER D +  D   +        F VI +NPPY+  
Sbjct: 70  LHYTGLEIQEESADMARRSVSYNGLEERIDIVTGDIKEAASIFGAASFGVITTNPPYMIG 129

Query: 178 VIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   E       +   +LD           I    ++ L   G   +  
Sbjct: 130 DHGLKNQNEALYIARHEALCTLD----------DILRESAKILKVKGRFYMVH 172


>gi|212709069|ref|ZP_03317197.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM
           30120]
 gi|212687981|gb|EEB47509.1| hypothetical protein PROVALCAL_00102 [Providencia alcalifaciens DSM
           30120]
          Length = 348

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR++   NV++      F        L D      L  + +     +LDL  G G +   
Sbjct: 170 WRNYQVDNVKIHALPGVFS----HNEL-DIGSDLLLSTLTEPMSGNVLDLACGNGVLAAV 224

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +  ++P       D+S  A++ A +    N ++ +   + SD +S ++  FD I+SNPP+
Sbjct: 225 VGTQNPAVTLTLSDVSASAIDSATATLAANNLTGKI--IPSDVYSDLDDKFDWIISNPPF 282

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG     +   T+     ++L K G  
Sbjct: 283 H---------------------DGINTSYNAVETLIFQAPKYLKKGGRL 310


>gi|260060773|ref|YP_003193853.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
 gi|88784903|gb|EAR16072.1| putative RNA methyltransferase [Robiginitalea biformata HTCC2501]
          Length = 237

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 12/160 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                ++LD+G+G G + L L +  P      V++   A      N   +  ++R     
Sbjct: 35  PESPGQLLDVGSGNGLLGLMLAQRCPSGDIEAVEVDPGAYVCCVENFEASPWADRLFCYH 94

Query: 155 SDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             W   V    G +D+I+SNPP+            V   +P          L    ++ +
Sbjct: 95  CSWEEFVAESAGPYDMIISNPPFHPEQ--------VSSHEPARERARREASLPF-NSLLE 145

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           GV R L + GL SV + +  + D  ++  +  L+     +
Sbjct: 146 GVDRLLAEQGLFSVVVPFASEADFTKLAAALGLYPQKVLR 185


>gi|260914552|ref|ZP_05921020.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325]
 gi|260631343|gb|EEX49526.1| metallothionein SmtA [Pasteurella dagmatis ATCC 43325]
          Length = 237

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +     RILDLGTGTG + L L + S    +   V++   AL  A+ N   +  + + 
Sbjct: 34  WADISQAKRILDLGTGTGLIALMLAQRSAEDCQISAVELDQAALLQAQENIQQSKWANKI 93

Query: 151 DTLQ---SDWFSSVEGLFDVIVSNPPYIESVI 179
                  +D+ ++    FD+IV+NPPY    I
Sbjct: 94  HLYSQNIADFCTNTVDKFDLIVANPPYFPQGI 125


>gi|262274964|ref|ZP_06052775.1| 16S RNA G1207 methylase RsmC [Grimontia hollisae CIP 101886]
 gi|262221527|gb|EEY72841.1| 16S RNA G1207 methylase RsmC [Grimontia hollisae CIP 101886]
          Length = 341

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 23/125 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G G +   + +  P      VDIS  A+  A+     N +    +   SD +S 
Sbjct: 203 VLDFGCGAGVIGAVIKQRYPETHITLVDISALAVASARETLRFNHLDG--EVFASDVYSD 260

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +   F+ IVSNPP+   +                         +   T       HL+  
Sbjct: 261 INTPFNNIVSNPPFHAGLKTH---------------------YAATETFLSEAPAHLHPQ 299

Query: 221 GLCSV 225
           G   +
Sbjct: 300 GQLMI 304


>gi|300775903|ref|ZP_07085763.1| methyltransferase [Chryseobacterium gleum ATCC 35910]
 gi|300505453|gb|EFK36591.1| methyltransferase [Chryseobacterium gleum ATCC 35910]
          Length = 230

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 19/167 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +L  +E      +L++GTGTG + L L + +P  + +G+DI+  A ++ + N  
Sbjct: 23  DGVLLGALADVE--SASNVLEVGTGTGLISLMLAQRNPHAEFLGLDINEDAAQLTRLNFE 80

Query: 143 TNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG 199
            +    R      D+ +      FD+IVSNPPY E      D +  +  +          
Sbjct: 81  NSPFRLRLKNSHQDFKTFETSDRFDLIVSNPPYFEESGSEKDKIARQTVE---------- 130

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              L+  + I    +  L+  G+ S+ I        V I +   L+L
Sbjct: 131 ---LNFSQLITR-AAELLSGSGIFSLIIPVEAGEIFVSIGKENNLYL 173


>gi|156355071|ref|XP_001623498.1| predicted protein [Nematostella vectensis]
 gi|156210206|gb|EDO31398.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 15/153 (9%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
             LV  A      + +    ++ L++G G GA+ +    + P  +    DI+  A+E   
Sbjct: 55  NELVSMARGLLKQKSDTESFLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWF--SSVEG-LFDVIVSNPP--YIESVIVDCLGLEVR-DFDP 192
            NA  +GV      +Q+D F    ++G  FD+I    P  + E      L +  R  +DP
Sbjct: 115 ENACLHGVENSVTAIQADVFDCDGLKGMKFDMIFFRQPGAFREDCDEKDLDMLARTVWDP 174

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S       G    L   G   +
Sbjct: 175 N---------YSVIERYLKGARGFLGNGGKLLL 198


>gi|238798253|ref|ZP_04641738.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           mollaretii ATCC 43969]
 gi|238717891|gb|EEQ09722.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           mollaretii ATCC 43969]
          Length = 347

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGDVTVKTLPGVF---SRDSL--DSGSHLLLSTFSEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLSDVSAAAIEASRATLAANNIEAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|238782738|ref|ZP_04626768.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           bercovieri ATCC 43970]
 gi|238716398|gb|EEQ08380.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           bercovieri ATCC 43970]
          Length = 347

 Score = 79.4 bits (195), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGDVTVKTLPGVF---SRDSL--DSGSHLLLSTFSEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLSDVSAAAIEASRATLAANNIDAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|282863639|ref|ZP_06272697.1| methyltransferase small [Streptomyces sp. ACTE]
 gi|282561340|gb|EFB66884.1| methyltransferase small [Streptomyces sp. ACTE]
          Length = 505

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L   + +   +    D++ +AL+  +     +G +   D  +
Sbjct: 154 RRPVASALDLGTGSGIQALHAAQHA--TQVTATDVNPRALDFTRLTLALSGAAP-ADLRE 210

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    +D+IVSNPP++ S                   DGG+ G    RT+    
Sbjct: 211 GSLFEPVGDLTYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQA 259

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
              LN  G       +    
Sbjct: 260 GDRLNDGGYAQFLANWQHVE 279


>gi|118602413|ref|YP_903628.1| methyltransferase small [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567352|gb|ABL02157.1| 16S rRNA m(2)G 1207 methyltransferase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 199

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 54/166 (32%), Gaps = 33/166 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ L      F PR      +D      +  +   +  + LDLG G G + LA+ K  P 
Sbjct: 28  DLTLKTRWGVFSPRS-----IDDGTELFMKHLRISNDDKCLDLGCGYGPIGLAVAKSCPQ 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVI 179
            +   VD    A+E++  N   N +        S+ F SV     FD I+SN P      
Sbjct: 83  GEVHMVDKDFVAVELSNINVKLNHI-NNAQAYLSNAFLSVNKTNYFDKILSNVP------ 135

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 +V              G      I       L  +G    
Sbjct: 136 -----AKV--------------GREQLSIILYDAYDALKPNGKIMF 162


>gi|259046669|ref|ZP_05737070.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens
           ATCC 49175]
 gi|259036834|gb|EEW38089.1| ribosomal protein L11 methyltransferase [Granulicatella adiacens
           ATCC 49175]
          Length = 314

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 76/214 (35%), Gaps = 52/214 (24%)

Query: 57  WRDFY-----NVRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y        LT+      +E   + ELL++              + L+ +      
Sbjct: 114 WKQYYFPVRVTRFLTVVPSWVDYEKEQDDELLIELDPGLAFGTGTHPTTQLSLTALEQTI 173

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K     K    DI   A  +AK N   N      +  ++
Sbjct: 174 RGNESVLDVGTGSGVLSIA-SKLLGASKVTAFDIDEMATRVAKENIALNPTIGEIEVFEN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+   D+IV+N   I + I+  +                           +   R
Sbjct: 233 NLLVGVDQKSDLIVAN---ILAEILLQMP--------------------------EDAYR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
           +LN DG   +  I  ++  +V   +E     LV 
Sbjct: 264 NLNDDGRLILSGIIESKANEVKEAYEKAGFTLVE 297


>gi|258645194|ref|ZP_05732663.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470]
 gi|260402543|gb|EEW96090.1| SAM-dependent methyltransferase [Dialister invisus DSM 15470]
          Length = 249

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 25/202 (12%)

Query: 75  RPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           RP+     +DS LA     I K+D  RI DLGTGTG + L LL           +I+   
Sbjct: 25  RPDQFCFSLDSILAAHYVSIRKKD--RIADLGTGTGVIAL-LLSALGGEDITAFEINPVM 81

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY--IESVIVDCLGLEV 187
            ++A+ N   N  S+    ++ D  +  +    G F+ +V NPPY  I +  ++      
Sbjct: 82  ADLARRNVNGNNKSDCIKVVEYDCRNVKKIYPTGSFNSVVVNPPYREIGTGRMNHCEGVA 141

Query: 188 -RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              ++  ++L            I       L   G  ++    ++ VD++ +    K+  
Sbjct: 142 SASYELNVTL----------EDIFHTAQYLLKYGGRLTMIHRADRLVDLITLGRRYKMEA 191

Query: 247 VNAFKDYGGND----RVLLFCR 264
                 Y        RVLL  R
Sbjct: 192 KRIRPVYARIGASAVRVLLEFR 213


>gi|126726040|ref|ZP_01741882.1| N-6 Adenine-specific DNA methylase [Rhodobacterales bacterium
           HTCC2150]
 gi|126705244|gb|EBA04335.1| N-6 Adenine-specific DNA methylase [Rhodobacterales bacterium
           HTCC2150]
          Length = 246

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 24/179 (13%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +L+LG G G   L L+         G+++      +A+ NA  N      D ++ 
Sbjct: 38  KPGQTVLELGCGVGVASLCLMSRV-DVSVTGLELQSDYAALARQNAARNQFE--MDIIEG 94

Query: 156 DWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D  +      E  FD +++NPPY             R+F  R  LD     L  +    D
Sbjct: 95  DIAALPSELREQSFDHVIANPPYYPKGGGTSAADAGREFANREILD-----LDVW---VD 146

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK--LFLVNAFKDYG--GND--RVLLFCR 264
             +R L   G  ++ I       +  +  +       V         G D  R++L  R
Sbjct: 147 AAARRLKPKGWLTLII---LAERMGELLVAMGDRFGAVEIIPLTARVGRDAGRIILRAR 202


>gi|309805275|ref|ZP_07699327.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 09V1-c]
 gi|308165509|gb|EFO67740.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 09V1-c]
          Length = 310

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   +S HL ++
Sbjct: 234 VKGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GRVIMSGIDCEQLPRIEKLLSENGFT 290


>gi|157364267|ref|YP_001471034.1| methyltransferase small [Thermotoga lettingae TMO]
 gi|157314871|gb|ABV33970.1| methyltransferase small [Thermotoga lettingae TMO]
          Length = 210

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 64  RLTLSSDTFEPRPE---TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +    S  F        T++LV+ A+             ++LDLG G G V + +  E P
Sbjct: 39  KFKTPSGVFSFGKVDKATKILVEHAIVH---------GKKVLDLGCGYGVVGIVVKGEYP 89

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             +    D++ +A+E A+ NA  N V          ++    E  FDVI+ NPP
Sbjct: 90  DSEVYMSDVNERAVEFARINAKDNNVD--VTIKCGSFYDPWQEEKFDVILLNPP 141


>gi|254581416|ref|XP_002496693.1| ZYRO0D05940p [Zygosaccharomyces rouxii]
 gi|238939585|emb|CAR27760.1| ZYRO0D05940p [Zygosaccharomyces rouxii]
          Length = 222

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 12/187 (6%)

Query: 71  TFEPRPETELLVD--SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----ESPFFKG 124
            +EP  ++ LL+D        L    +  +  + +LG G+G V   L++           
Sbjct: 14  VYEPCEDSFLLLDGLEQEQSFLQTRFRNQLAIVCELGPGSGIVTTFLMQNDIPHGNGSIY 73

Query: 125 VGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           + +DIS  ALE  +     N    R    +QSD    + +   D++V NPPY+ +  V  
Sbjct: 74  LALDISPWALEATQDAQRRNDCQNRYLSVIQSDLTKCLRQNSTDLLVFNPPYVPAEQVPD 133

Query: 183 LGLEVRDFDPR---ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRI 238
                 +   +   ++L GG DG+   R + D +   L++ G+  +     N+   V   
Sbjct: 134 RPSSNENDKSQWLDLALLGGEDGMVITRQVLDQLDTILSQQGVAYILFCARNKPEQVAES 193

Query: 239 FESRKLF 245
              +   
Sbjct: 194 MRQQGWK 200


>gi|255038863|ref|YP_003089484.1| methyltransferase small [Dyadobacter fermentans DSM 18053]
 gi|262828188|sp|C6VS84|TRMN6_DYAFD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|254951619|gb|ACT96319.1| methyltransferase small [Dyadobacter fermentans DSM 18053]
          Length = 240

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 10/158 (6%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +  D  RILD+G GTG + L + + + +     V+I  +A   A  N   +   +R  
Sbjct: 33  WADVEDADRILDIGAGTGLLSLMVAQRNTYAMIDAVEIDAEAFYQAGENVEQSPFHDRIT 92

Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
              S     V E  +DVI++NPP+ +S ++  +  +                L     + 
Sbjct: 93  LFHSAVQEFVSEHRYDVIITNPPFFQSDLLSPIDKKNIAH--------HAKSLDF-EELL 143

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + R L  +G  ++    ++              L  
Sbjct: 144 TAIERLLKPEGKFNILFPVDEGSRFAEKAAHAGWKLTR 181


>gi|159039802|ref|YP_001539055.1| methyltransferase small [Salinispora arenicola CNS-205]
 gi|157918637|gb|ABW00065.1| methyltransferase small [Salinispora arenicola CNS-205]
          Length = 201

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 5/140 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L             ++LDLG G G +   L   +P      VD++ +A E+   NA  
Sbjct: 48  AVLLRKADLPAPTTTGQLLDLGCGFGPITCVLATSAPSATVWAVDVNARARELTTVNAAR 107

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G + R   ++ D  ++    FD I SNPP    +  + L   +  + PR++ D G+  L
Sbjct: 108 VGAAGRVRVVEPDAVAA-AVTFDQIWSNPPI--RIGKNELHQLLLRWLPRLAPD-GVAWL 163

Query: 204 SHYRTI-ADGVSRHLNKDGL 222
              R +  D + R L + G 
Sbjct: 164 VVARHLGGDSLHRWLAERGW 183


>gi|332798043|ref|YP_004459542.1| methyltransferase small [Tepidanaerobacter sp. Re1]
 gi|332695778|gb|AEE90235.1| methyltransferase small [Tepidanaerobacter sp. Re1]
          Length = 251

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 25/171 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++    D+++   ++ LL +         I+     R++D+GTG+G + L L  ++  
Sbjct: 19  GLKIIQKQDSYKFAIDSVLLANF--------IKADKNDRVIDIGTGSGVIALLLSAKTDA 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            + VG++I  +A + A  N   N + ER   +  D   +V+      F V+V+NPPY+  
Sbjct: 71  KEIVGIEIVGEAFDRAVRNVKMNRLEERVKIVHGDLKEAVKIFGRESFSVVVTNPPYMMI 130

Query: 178 VIVDCLGL---EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       V   +   +L            +A    + L+  G   +
Sbjct: 131 NEGKISPNPSIAVARHEVAATL----------EDVAKVSWQLLSFGGCFYM 171


>gi|326777711|ref|ZP_08236976.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1]
 gi|326658044|gb|EGE42890.1| methyltransferase small [Streptomyces cf. griseus XylebKG-1]
          Length = 510

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LD+GTG+G   L   + +   +    D++ +ALE  +     +G +   D  +
Sbjct: 158 RAPVASALDIGTGSGIQALHAAQHA--SRVTATDLNPRALEFTRLTLALSGAAP-ADLRE 214

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD+IVSNPP++ S                   DGG+ G    R +    
Sbjct: 215 GSLFEPVGSDTFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRALVQRS 263

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
             HLN+ G       +    
Sbjct: 264 GAHLNEGGYAQFLANWQHVE 283


>gi|217076536|ref|YP_002334252.1| ribosomal protein L11 methyltransferase [Thermosipho africanus
           TCF52B]
 gi|259534593|sp|B7IFP7|PRMA_THEAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|217036389|gb|ACJ74911.1| ribosomal protein L11 methyltransferase [Thermosipho africanus
           TCF52B]
          Length = 260

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 32/130 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  + +LDLG G+  + + L K+    + +GVD    A+E AK N   N V    +  QS
Sbjct: 131 RPGMDVLDLGCGSAILSI-LAKKLGADRVLGVDNDPLAVEAAKENVERNNVD--VEIRQS 187

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D FS+V+G FD+IVSN   I  ++++ L                             + +
Sbjct: 188 DLFSNVDGKFDLIVSN--IIAEILIEAL---------------------------KDLPK 218

Query: 216 HLNKDGLCSV 225
            L KDG+  +
Sbjct: 219 FLKKDGVVIL 228


>gi|297193024|ref|ZP_06910422.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719846|gb|EDY63754.1| rRNA or tRNA methyltransferase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 484

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +   +    D++ +AL   +     +G  E  D  +
Sbjct: 141 RTPVGSALDLGTGSGIQALHAAQHA--TRVTATDLNPRALHFTRLTLALSGARE-ADLRE 197

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    +D+IVSNPP++ S                   DGG+ G    R++    
Sbjct: 198 GSLFEPVGSDTYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRSLVQQA 246

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
              LN  G       +    
Sbjct: 247 GDRLNDGGHAQFLANWQHVE 266


>gi|312876839|ref|ZP_07736816.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796354|gb|EFR12706.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 304

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 39/172 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL     +   +  + +LD+GTG+G + +A  K+    + + VDI   A+++A+ NA  
Sbjct: 155 TALCLEAIQEYVKPGMDVLDVGTGSGILAIA-AKKFLAKRVLAVDIDEVAVKVAEENARL 213

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NGV    +  ++D    +E  FDV+++N                      ++        
Sbjct: 214 NGVE--IEIKKNDLVEGIEEKFDVVIAN---------------------IVA-------- 242

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGY----NQKVDVVRIFESRKLFLVNAFK 251
                ++  ++R L +DG+    I      ++  DV++ FE   L +V   K
Sbjct: 243 DIIIKLSKDINRVLKEDGIF---ISSGIIRDRLEDVLKSFEKNSLEIVEVKK 291


>gi|26990482|ref|NP_745907.1| hypothetical protein PP_3777 [Pseudomonas putida KT2440]
 gi|24985456|gb|AAN69371.1|AE016574_3 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 279

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 7/132 (5%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R LD+GTG+G   L LL++         DIS  A++ A++N + N      + +Q D F
Sbjct: 60  ARFLDVGTGSGVHAL-LLRQLGMRHITACDISVDAVQAARANELVNLGESCIEFVQGDLF 118

Query: 159 SSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR--ISLDGGIDGLSHYRTIADGV 213
            ++   E  +DVI+ NPP  ++     L    R  +    +SL+    G    R   + V
Sbjct: 119 DAMPAAEDGYDVILFNPPGWQTPSDGFLDALQR-IEAAQGLSLEAMFYGERTLRRFFERV 177

Query: 214 SRHLNKDGLCSV 225
             +L   G   +
Sbjct: 178 PSYLKPGGKLII 189


>gi|296129408|ref|YP_003636658.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
 gi|296021223|gb|ADG74459.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
          Length = 205

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 8/159 (5%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                + +      P+   L    L  ++P         +LDLG G G V L L   SP 
Sbjct: 32  GRDAEVETAGGVFSPDHVDLGTQVLLRTVPA--PPATGDLLDLGCGWGPVALTLALLSPD 89

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VD++ +AL++ + NA   G+         D    V+  F  + SNPP    +   
Sbjct: 90  ARVWAVDVNERALDLVRRNAARLGLGNVVAATPDDV--PVDVAFAALWSNPPV--RIGKP 145

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNK 219
            L   +  + PR++  GG   L   R + AD + R L +
Sbjct: 146 ALRELLLRWLPRVAP-GGEAWLVVGRHLGADPLQRWLTE 183


>gi|293365817|ref|ZP_06612522.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307703313|ref|ZP_07640258.1| methyltransferase small domain protein [Streptococcus oralis ATCC
           35037]
 gi|322375582|ref|ZP_08050094.1| methyltransferase [Streptococcus sp. C300]
 gi|291315641|gb|EFE56089.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
 gi|307623179|gb|EFO02171.1| methyltransferase small domain protein [Streptococcus oralis ATCC
           35037]
 gi|321279290|gb|EFX56331.1| methyltransferase [Streptococcus sp. C300]
          Length = 249

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  KR +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKRGL--IVDFCAGNGAVGL-FASSRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  ARIISVEIQERLADMAERSVQLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------KEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLQRHNL 191


>gi|261855171|ref|YP_003262454.1| methyltransferase small [Halothiobacillus neapolitanus c2]
 gi|261835640|gb|ACX95407.1| methyltransferase small [Halothiobacillus neapolitanus c2]
          Length = 196

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 19/154 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L  +   F PR      +D      +  ++  +    I+DLG G G + LAL K  P
Sbjct: 24  SLTLHSTWGLFSPRE-----IDEGTRLLMGFLDAPEPGQTIVDLGCGYGPIGLALAKAQP 78

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVI 179
               + +D    A E A SNA  N +        S+   ++ G   D IVSN P      
Sbjct: 79  KADVILLDKDFVACEFAASNAKRNQL-NNVVVKPSNGLDALRGQHVDRIVSNVP----AK 133

Query: 180 VDCLGLEVRDFDPRISLDGGID-------GLSHY 206
           V      +  +D   +L+ G D       GL  Y
Sbjct: 134 VGKEMWSIMLWDAAEALNPGGDIWFVSINGLRDY 167


>gi|328956620|ref|YP_004374006.1| putative methyltransferase [Carnobacterium sp. 17-4]
 gi|328672944|gb|AEB28990.1| putative methyltransferase [Carnobacterium sp. 17-4]
          Length = 258

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 28/199 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+ +  S   F    +  LL D A      +  K +  +++DL  G G V L L +++ 
Sbjct: 25  HNLSIIQSPSVFSFSLDAVLLADFA------QPAKHNRAKVVDLCAGNGVVGLLLSQKTS 78

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE 176
               VG++I  + + +AK     N +  +   +  D   + +       D +  NPPY  
Sbjct: 79  SP-IVGIEIQERLVGMAKRTIQLNELEHQVSIIHGDLSEASKWIQKDTVDTLTCNPPYFA 137

Query: 177 SVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                         +   +   +LD           +    S  L  +G        +  
Sbjct: 138 VGEKSIKNPNSHLAIARHELHTNLD----------EVMKVSSDLLKMNGKAYFVHRPD-- 185

Query: 233 VDVVRIFESRKLFLVNAFK 251
             ++ I E+ K   +   K
Sbjct: 186 -RLIEILETMKKHRIAPKK 203


>gi|260588968|ref|ZP_05854881.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM
           20583]
 gi|331083310|ref|ZP_08332423.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540747|gb|EEX21316.1| putative N-6 adenine-specific DNA methylase [Blautia hansenii DSM
           20583]
 gi|330404391|gb|EGG83936.1| hypothetical protein HMPREF0992_01347 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 249

 Score = 79.0 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 20/154 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D+ L     ++  +   R+LD+GTGTG V + L    P  +   G++I  ++ E A+ +
Sbjct: 31  IDAVLLSWFAQV--KPGERVLDMGTGTGIVPILLKARYPKGEHFTGLEIQEESAERARRS 88

Query: 141 AVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPR 193
              N + +       D   S        FDV+ +NPPY+          E +     +  
Sbjct: 89  VAYNHLEQDITITTGDIKESASIYGGAFFDVVTTNPPYMIGHHGLTGSNEAKIIARHETL 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +L            I    ++ L   G   +  
Sbjct: 149 CNL----------EDIISQAAKVLKPKGRFYMVH 172


>gi|156358208|ref|XP_001624415.1| predicted protein [Nematostella vectensis]
 gi|156211193|gb|EDO32315.1| predicted protein [Nematostella vectensis]
          Length = 252

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 15/153 (9%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           E LV  A      +      ++ L++G G GA+ +    + P  +    DI+  A+E   
Sbjct: 55  EELVSMARGLLKQKSNTESSLKFLEVGAGMGAIAIEFALQVPQAEVWATDINPAAVEDVA 114

Query: 139 SNAVTNGVSERFDTLQSDWF--SSVEG-LFDVIVSNPP--YIESVIVDCLGLEVR-DFDP 192
            NA  +GV      +Q+D F    ++G  FD+I    P  + E      L +  R  +DP
Sbjct: 115 ENACLHGVENSVTAIQADVFDCDGLKGMKFDMIFFRQPGAFREDCDEKDLDMLARTVWDP 174

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S       G    L   G   +
Sbjct: 175 N---------YSVIERYLKGARGFLGNGGKLLL 198


>gi|313836078|gb|EFS73792.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA2]
 gi|314929614|gb|EFS93445.1| methyltransferase small domain protein [Propionibacterium acnes
           HL044PA1]
 gi|314970610|gb|EFT14708.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA3]
 gi|328906180|gb|EGG25955.1| methyltransferase small domain protein [Propionibacterium sp. P08]
          Length = 206

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P  + V VD++  A+++   NA   GV +R    
Sbjct: 63  PPPSDGTFLDLGCGYGPIACALGRACPGSRVVSVDVNDLAIDLTTRNAKALGVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
           + D     +  FD I SNPP
Sbjct: 123 RPDEVDP-DLRFDEIWSNPP 141


>gi|117620051|ref|YP_858250.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|226712986|sp|A0KPP9|RSMC_AERHH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|117561458|gb|ABK38406.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 342

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 23/124 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD G G G +   L K +P  K   VDI+  ALE ++     NG+    +   SD +S +
Sbjct: 207 LDFGCGAGVIGSVLAKRNPGLKVTMVDINALALESSRRTLAINGLQG--EVWASDVYSDI 264

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +G F  IVSNPP+            ++ F             +   T       HL   G
Sbjct: 265 QGKFGRIVSNPPFHAG---------LKTF------------YAATETFLAKAPDHLQSQG 303

Query: 222 LCSV 225
             ++
Sbjct: 304 SLTI 307


>gi|269795602|ref|YP_003315057.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
 gi|269097787|gb|ACZ22223.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
          Length = 217

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
            +   +  +L  R+   V +  +   F P       VD      L  ++      +LDLG
Sbjct: 18  AERRPLTVVLDGRE---VEVETAGGIFSPGR-----VDLGTQVLLRTVQDPPSGDVLDLG 69

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G G V L +  ++P  +   VD++ +AL++ + NA   G+         D  + V   F
Sbjct: 70  AGWGPVSLTMAMQNPQARVWAVDVNERALDLVRRNAARLGLENVTACTPDDVPADV--RF 127

Query: 166 DVIVSNPPYIESVIV--DCLGLEVRDFDP 192
             + SNPP      V    L   +   +P
Sbjct: 128 AQLWSNPPIRVGKDVLHSMLDRWLPRLEP 156


>gi|160942758|ref|ZP_02089999.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445923|gb|EDP22926.1| hypothetical protein FAEPRAM212_00235 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103833|emb|CBL01377.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Faecalibacterium prausnitzii SL3/3]
          Length = 304

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPETELLV-DSALAFSLPRIEK------------RD 97
           GWR +Y+      RL +     +   +   L+ D  LAF     E             R 
Sbjct: 108 GWRKYYHPMEIGSRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCLEALDEQVRG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A   +       GVDI   A+  A  NA  NGV ++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIA-ALKLGAASAEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGTYDIITAN 240


>gi|163789936|ref|ZP_02184372.1| Putative methyltransferase [Carnobacterium sp. AT7]
 gi|159874876|gb|EDP68944.1| Putative methyltransferase [Carnobacterium sp. AT7]
          Length = 250

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 28/199 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+ +  S   F    +  LL D A      +  K D  +++DL  G G V L LL +  
Sbjct: 17  HNLSIIQSPSVFSFSLDAVLLADFA------QPAKHDRAKVVDLCAGNGVVGL-LLSQKT 69

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE 176
               +G++I  + +++A      NG+ ++   +  D   + +       D +  NPPY  
Sbjct: 70  NSPIIGIEIQERLVDMANRTIQVNGLEKQVSIVHGDLSDASKWIKKDTVDTLTCNPPYFA 129

Query: 177 SVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                         +   +   +LD           +    S  L  +G        +  
Sbjct: 130 VGEKSIKNPNSHLAIARHELHTNLD----------EVMKVSSGLLKMNGKAYFVHRPD-- 177

Query: 233 VDVVRIFESRKLFLVNAFK 251
             ++ I E+ K + +   K
Sbjct: 178 -RLIEILETMKKYRIAPKK 195


>gi|327451839|gb|EGE98493.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA2]
          Length = 152

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
           + +     +  FD I SNPP
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP 141


>gi|260582312|ref|ZP_05850105.1| O-methyltransferase [Haemophilus influenzae NT127]
 gi|260094680|gb|EEW78575.1| O-methyltransferase [Haemophilus influenzae NT127]
          Length = 240

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A++ A+ N   +    R 
Sbjct: 38  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRI 97

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D    ++     FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  + HL+++G  S  + Y     + +
Sbjct: 149 --WLEWAATHLSENGKISFVLPYEAGKTLTK 177


>gi|120434502|ref|YP_860199.1| hypothetical protein GFO_0132 [Gramella forsetii KT0803]
 gi|262828327|sp|A0LXM6|TRMN6_GRAFK RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|117576652|emb|CAL65121.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 240

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L L + S       ++I   A E +  N   +   +R     + +
Sbjct: 39  PDSILDIGTGTGLIALMLAQRSDAELIDALEIEENAYEQSVENFENSDWGDRLFCYHAAF 98

Query: 158 FSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              V     E  +D+I+SNPP+         G E RD     +       L+    +  G
Sbjct: 99  DEFVEEMQDEEKYDLIISNPPFYSENYKT--GDEYRD----QARFADALPLT---ELIQG 149

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            S  L+++G   + I ++++   + I  S  LF
Sbjct: 150 ASHLLSENGHLDLIIPFSEERKALEITSSHNLF 182


>gi|320539203|ref|ZP_08038874.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia symbiotica str. Tucson]
 gi|320030841|gb|EFW12849.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Serratia symbiotica str. Tucson]
          Length = 248

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 56/159 (35%), Gaps = 17/159 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G+G+G + L L + S        V++   A E A+ N   +   +R 
Sbjct: 42  WAPLAQAQRVLDIGSGSGLIALMLAQRSAAEVMIDAVELDEAAAEQARDNVQKSPWPQRI 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSH 205
                D +         +D+IVSNPPY E  +   D      R  +              
Sbjct: 102 KVYAQDIYYYAEHHAAQYDLIVSNPPYFEPAVACRDQARHNARCTETLT----------- 150

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           + T+     + +N+ G+  V + YN              
Sbjct: 151 HATLLKCAEQLINEQGVFCVVLPYNIGTAFEIQAHQCGW 189


>gi|332160199|ref|YP_004296776.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318607236|emb|CBY28734.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325664429|gb|ADZ41073.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860113|emb|CBX70437.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica W22703]
          Length = 347

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS     L    +     +LD+G G G +   L ++SP  K    D+S  A+E +++   
Sbjct: 182 DSGSHLLLSTFSEPFKGSVLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  +   + S+ +S ++G F++I+SNPP+                      DG    
Sbjct: 242 ANNIEAQV--IASNVYSDIKGRFEMIISNPPFH---------------------DGIQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L+    +  G + HL+  G  
Sbjct: 279 LTAAEMLIRGATAHLHVGGKL 299


>gi|194018002|ref|ZP_03056609.1| YabB [Bacillus pumilus ATCC 7061]
 gi|194010339|gb|EDW19914.1| YabB [Bacillus pumilus ATCC 7061]
          Length = 247

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 30/202 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL   A               I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIIQSKTVFAFSLDAVLLAKFAYVPI-------QKGEIIDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G V L LL         GV+I  +  ++AK +   N + ++ + +  D            
Sbjct: 57  GIVPL-LLSTRSKASITGVEIQERLFDMAKRSVAYNQLEKQIELIHGDLNDMPSRYGNHK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            DVI  NPPY ++   + +       +   +   +L            +    S  L + 
Sbjct: 116 VDVITCNPPYFKTPSKEEINENEYLAIARHEIHCTL----------EDVIRVSSTLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESR 242
           G  ++     + +++V + +  
Sbjct: 166 GKLAMVHRPGRLLEIVELMKKY 187


>gi|312622232|ref|YP_004023845.1| 50S ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202699|gb|ADQ46026.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 306

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 85/219 (38%), Gaps = 60/219 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--------TELLVDSALAFSLPRIEK------------R 96
           W+ +Y   + + +    P  E        T + +D  +AF     E             +
Sbjct: 109 WKKYYK-PVEIGNIVIVPSWEDYKAEDSKTIVWLDPGMAFGTGTHESTILCLEAIQKYVK 167

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD+GTG+G + +A  K+    + + VDI   A+++A+ NA  NGV    +  ++D
Sbjct: 168 PGMDVLDVGTGSGILAIA-AKKFLARRVLAVDIDEVAVKVAEENARLNGVE--IEIKKND 224

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               +E  FDV+++N                      ++             ++  V + 
Sbjct: 225 LVEGIEEKFDVVIAN---------------------IVA--------DIIVRLSRDVKKV 255

Query: 217 LNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L  D +      +E   ++  DV++ FE   L +V   K
Sbjct: 256 LKDDRIFISSGIIE---DRLEDVLKSFEKSSLEIVEVKK 291


>gi|37528084|ref|NP_931429.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|81418259|sp|Q7MZN0|RSMC_PHOLL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|36787521|emb|CAE16624.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N2-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 338

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 23/135 (17%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   +K     +LD+  G G +   L K++P       D++  A+  +K+    N +  
Sbjct: 188 LLSTFDKPLSGNLLDIACGAGVLAAVLGKKNPELALTLSDVNAAAIASSKATLKANKLEG 247

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                 S+ +S++E  FD I+SNPP+                +      G    L     
Sbjct: 248 HVVV--SNVYSNIEDKFDWIISNPPF---------------HE------GLKTSLLATDD 284

Query: 209 IADGVSRHLNKDGLC 223
           +      HL   G  
Sbjct: 285 LIRQAPNHLKPGGKL 299


>gi|284165666|ref|YP_003403945.1| methylase [Haloterrigena turkmenica DSM 5511]
 gi|284015321|gb|ADB61272.1| methylase [Haloterrigena turkmenica DSM 5511]
          Length = 193

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 71/185 (38%), Gaps = 19/185 (10%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + +D ++P  ++ L    A A      +  +   +L++GTG+G V   +  E+P  + + 
Sbjct: 9   VETDVYQPAEDSHL---LADAACDDLADADEGSLVLEVGTGSGYVAGRIDDETP-ARVIA 64

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            D++  A+  A+            + +++D  +   +G  D +  NPPY+ +   +    
Sbjct: 65  ADLNPHAVRQARE--------ADLEAVRADLVAPFADGALDAVAFNPPYLPTDPDNEWDD 116

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-VVRIFESRKL 244
            +       +L GG DG +        V R L   G   + +     VD VV        
Sbjct: 117 WM-----ERALSGGEDGRAVIDPFLADVGRVLKPSGSVYLLVSSLTGVDEVVEEAGEHGF 171

Query: 245 FLVNA 249
                
Sbjct: 172 SAAAV 176


>gi|238790071|ref|ZP_04633849.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           frederiksenii ATCC 33641]
 gi|238721884|gb|EEQ13546.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           frederiksenii ATCC 33641]
          Length = 347

 Score = 79.0 bits (194), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGDVTVKTLPGVF---SRDSL--DSGSHLLLSTFSEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++ P  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQLPKIKWTLSDVSAAAIESSRATLAANNIEAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|329939422|ref|ZP_08288758.1| transferase [Streptomyces griseoaurantiacus M045]
 gi|329301651|gb|EGG45545.1| transferase [Streptomyces griseoaurantiacus M045]
          Length = 514

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 17/162 (10%)

Query: 75  RPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           R E+ +L V  A         +  V   LDLGTG+G   L   + +   +    D++ +A
Sbjct: 150 RQESVVLGVGGASTTLAGLTVRTPVGAALDLGTGSGIQALHASRHA--TRVTATDVNPRA 207

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           L I       +G     D  +   F  V  E  +D+IVSNPP++       +  + R   
Sbjct: 208 LHITALTLALSGAPA-ADLREGSLFEPVPEEETYDLIVSNPPFV-------ISPDAR--- 256

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                DGG+ G    RT+       LN  G       +    
Sbjct: 257 -LTYRDGGMAGDDLCRTLVQQAGGRLNPGGFAQFLANWQHVE 297


>gi|319898056|ref|YP_004136253.1| o-methyltransferase [Haemophilus influenzae F3031]
 gi|317433562|emb|CBY81946.1| predicted O-methyltransferase [Haemophilus influenzae F3031]
          Length = 232

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLTQADIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  + HL+++G  S  + Y     +++
Sbjct: 141 --WLEWAATHLSENGKISFVLPYEAGKTLIK 169


>gi|227875232|ref|ZP_03993374.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35243]
 gi|227844137|gb|EEJ54304.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35243]
          Length = 282

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLAL 115
             +   +   + +D+     +    +D   A  L ++ K  +    +D+G G G + L +
Sbjct: 99  EVELAGMTFRIHTDSGVFSGDG---LDKGTAVLLRKVPKLPEGGVFVDVGCGWGPLSLVM 155

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
            ++ P  + V VD++ +AL++   NA  NG+       ++   + + +G  DVI SNPP 
Sbjct: 156 ARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLAETAALAQLADGSVDVIWSNPP- 214

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
                       VR          G D L    T      R  L   G+  + +G N   
Sbjct: 215 ------------VRI---------GKDALHAMWT----AWRVKLRPGGVAYLVMGRNLGA 249

Query: 234 DV-VRIFESRKL 244
           D           
Sbjct: 250 DTFAAWARDSGW 261


>gi|317473411|ref|ZP_07932705.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA]
 gi|316899061|gb|EFV21081.1| methyltransferase type 11 [Anaerostipes sp. 3_2_56FAA]
          Length = 240

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 19/176 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  +++K     +LDLGTGTG + + +  ++P     G++I  +  E+A  +A
Sbjct: 22  MDAVLLSSFVKVKKNGN--VLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAEMAARSA 79

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             NG+ E+ + ++ D   +        FDVI SNPPY+          +V+     +   
Sbjct: 80  ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYMVHDHGFRNSNDVKAIARHEI-- 137

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                   L  +R I+      L   G   +     +  +++    +  L      
Sbjct: 138 --------LCRFRDISGAARVLLKHSGSLFLVHRSYRLSEILNCLSNDGLEPKRIR 185


>gi|300727710|ref|ZP_07061096.1| methyltransferase small domain protein [Prevotella bryantii B14]
 gi|299774998|gb|EFI71604.1| methyltransferase small domain protein [Prevotella bryantii B14]
          Length = 241

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 58/158 (36%), Gaps = 22/158 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
            +LD+GTGTG + L + +  P      +DI   A   A  N   +   ++      D   
Sbjct: 38  HVLDIGTGTGLLALMMAQRYPNAFVDAIDIDDAACRQAVENVRNSIFHDQICVHFMDLQK 97

Query: 158 -FSSVEG------LFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            +  ++G       +D I+SNPPY  + +   D   +  R  +              Y  
Sbjct: 98  YYLFLQGNSGDVKKYDSIISNPPYFVNSLKNPDSQRMMARHAESL-----------PYSE 146

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           + +     L  DG  SV +        V I  S+  +L
Sbjct: 147 LLEVSKNLLKVDGSLSVILPAETVDSFVSIACSKGYYL 184


>gi|227874251|ref|ZP_03992450.1| O-methyltransferase [Oribacterium sinus F0268]
 gi|227839920|gb|EEJ50351.1| O-methyltransferase [Oribacterium sinus F0268]
          Length = 245

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+   S+ F    +  LL + A        +     R+ DL TG G V L L  ++  
Sbjct: 11  GYRIIQDSEAFCYGTDAVLLANFA-------KQGVKRGRVFDLCTGNGIVPLLLAAKTEA 63

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----------FDVIVSN 171
               G++I  +A+E+A+ +   N    R   L+ D     E            F V+ +N
Sbjct: 64  ESIYGIEIQREAVELARRSVALNE-EARIHILEGDLCKIQEQRTAEGKSLASSFTVVTAN 122

Query: 172 PPYIESVIVDCLG-LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PPY++  + + L    +   +   S             +++     L   G   +     
Sbjct: 123 PPYMQGDLQNPLEKKNIARHEVSCSFT----------DVSEAARYLLAPKGRFYLVHRPK 172

Query: 231 QKVDVVRIFESRKL 244
           +  +++ I   + L
Sbjct: 173 RMAEIISILREKGL 186


>gi|255656431|ref|ZP_05401840.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-23m63]
 gi|296450122|ref|ZP_06891883.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           NAP08]
 gi|296878503|ref|ZP_06902508.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           NAP07]
 gi|296260885|gb|EFH07719.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           NAP08]
 gi|296430310|gb|EFH16152.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           NAP07]
          Length = 315

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G G+G + +A  K     + V VD+   A+++AK N + N V +    +  +   
Sbjct: 180 KVFDIGCGSGILAIAAAKLGAK-EVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTD 238

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++   DVIV+N   I + I+  L  +V++F  +  I +  G           + V   L
Sbjct: 239 VIKDKADVIVAN---IIADIIKILAKDVQNFMKEDAIFISSG-----IILDKVEEVKESL 290

Query: 218 NKDGLCSVEI 227
            ++G   VE+
Sbjct: 291 IENGFEIVEV 300


>gi|255101610|ref|ZP_05330587.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-63q42]
 gi|255307479|ref|ZP_05351650.1| ribosomal protein L11 methyltransferase [Clostridium difficile ATCC
           43255]
          Length = 315

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G G+G + +A  K     + V VD+   A+++AK N + N V +    +  +   
Sbjct: 180 KVFDIGCGSGILAIAAAKLGAK-EVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTD 238

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++   DVIV+N   I + I+  L  +V++F  +  I +  G           + V   L
Sbjct: 239 VIKDKADVIVAN---IIADIIKILAKDVQNFMKEDAIFISSG-----IILDKVEEVKESL 290

Query: 218 NKDGLCSVEI 227
            ++G   VE+
Sbjct: 291 IENGFEIVEV 300


>gi|126700067|ref|YP_001088964.1| ribosomal protein L11 methyltransferase [Clostridium difficile 630]
 gi|115251504|emb|CAJ69337.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Clostridium
           difficile]
          Length = 315

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G G+G + +A  K     + V VD+   A+++AK N + N V +    +  +   
Sbjct: 180 KVFDIGCGSGILAIAAAKLGAK-EVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTD 238

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++   DVIV+N   I + I+  L  +V++F  +  I +  G           + V   L
Sbjct: 239 VIKDKADVIVAN---IIADIIKILAKDVQNFMKEDAIFISSG-----IILDKVEEVKESL 290

Query: 218 NKDGLCSVEI 227
            ++G   VE+
Sbjct: 291 IENGFEIVEV 300


>gi|145596403|ref|YP_001160700.1| methyltransferase small [Salinispora tropica CNB-440]
 gi|145305740|gb|ABP56322.1| 16S rRNA m(2)G 1207 methyltransferase [Salinispora tropica CNB-440]
          Length = 201

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L              +LDLG G G +   L    P      VD++ +A E+  +NA  
Sbjct: 48  AVLLRKAELPAPDSTGHLLDLGCGFGPITCVLATSVPSATVWAVDVNERARELTTANAAR 107

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G + R      D   +    FD I SNPP    +  + L   +  + PR++  GG+  L
Sbjct: 108 VGAAGRVRVAPPDAVPA-AVTFDQIWSNPPI--RIGKNELHQLLLRWLPRLAP-GGVAWL 163

Query: 204 SHYRTI-ADGVSRHLNKDGL 222
              R +  D + R L++ G 
Sbjct: 164 VVARHLGGDSLHRWLSERGW 183


>gi|254976044|ref|ZP_05272516.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-66c26]
 gi|255093432|ref|ZP_05322910.1| ribosomal protein L11 methyltransferase [Clostridium difficile CIP
           107932]
 gi|255315177|ref|ZP_05356760.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-76w55]
 gi|255517846|ref|ZP_05385522.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-97b34]
 gi|255650962|ref|ZP_05397864.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-37x79]
 gi|260684031|ref|YP_003215316.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           CD196]
 gi|260687691|ref|YP_003218825.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           R20291]
 gi|306520840|ref|ZP_07407187.1| ribosomal protein L11 methyltransferase [Clostridium difficile
           QCD-32g58]
 gi|260210194|emb|CBA64402.1| putative ribosomal protein L11 methyltransferase [Clostridium
           difficile CD196]
 gi|260213708|emb|CBE05590.1| putative ribosomal protein L11 methyltransferase [Clostridium
           difficile R20291]
          Length = 315

 Score = 78.6 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 11/130 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++ D+G G+G + +A  K     + V VD+   A+++AK N + N V +    +  +   
Sbjct: 180 KVFDIGCGSGILAIAAAKLGAK-EVVAVDLDEVAVKVAKENVLENKVEKSVSVMHGNLTD 238

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHL 217
            ++   DVIV+N   I + I+  L  +V++F  +  I +  G           + V   L
Sbjct: 239 VIKDKADVIVAN---IIADIIKILAKDVQNFMKEDAIFISSG-----IILDKVEEVKESL 290

Query: 218 NKDGLCSVEI 227
            ++G   VE+
Sbjct: 291 IENGFEIVEV 300


>gi|123440930|ref|YP_001004921.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|226723586|sp|A1JJ89|RSMC_YERE8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|122087891|emb|CAL10679.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 347

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS     L    +     +LD+G G G +   L ++SP  K    D+S  A+E +++   
Sbjct: 182 DSGSHLLLSTFSEPFKGSVLDVGCGAGVLACVLAQQSPKIKWTLSDVSAAAIEASRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  +   + S+ +S ++G F++I+SNPP+                      DG    
Sbjct: 242 ANNIEAQV--IASNVYSDIKGRFEMIISNPPFH---------------------DGIQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L+    +  G + HL+  G  
Sbjct: 279 LTAAEMLIRGATAHLHVGGKL 299


>gi|284041963|ref|YP_003392303.1| methyltransferase small [Conexibacter woesei DSM 14684]
 gi|283946184|gb|ADB48928.1| methyltransferase small [Conexibacter woesei DSM 14684]
          Length = 372

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 17/158 (10%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +        V R LDL TG+G +  +LL        V V+I     E A+ NA+ NG+ 
Sbjct: 149 MARFTANLGPVERALDLCTGSGLLA-SLLDAR---HTVAVEIDPDVAEAARFNAILNGLE 204

Query: 148 ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ER D    D +++V G  F++IV+NPP++ +     L                       
Sbjct: 205 ERIDVRAGDLYAAVPGERFELIVANPPFLPTPDGLALPSCGDGGSDGG---------EAL 255

Query: 207 RTIADGVSRHLNKDGLCSVE---IGYNQKVDVVRIFES 241
           R I  G+   L+  G   +     G  Q+  +      
Sbjct: 256 RAILGGLGERLSFGGRALIYGQGFGSEQEPSIAAWLRE 293


>gi|94500339|ref|ZP_01306872.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65]
 gi|94427638|gb|EAT12615.1| hypothetical protein RED65_06958 [Oceanobacter sp. RED65]
          Length = 240

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 19/168 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +    E      +LDLG GTG + L L +        G+++   A   A +N  
Sbjct: 23  DACLFAAYIARESSAPEYVLDLGMGTGVLGLMLAQAF-DAHITGIELDSDACRDAHTNIE 81

Query: 143 TNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVR----DFDPRISLD 197
            +  S R   LQ+D     +    D+IVSNPP+  + + +    +      +  P   L 
Sbjct: 82  ASPFSNRVRVLQADIRQWRDTRRSDLIVSNPPFFTAHLANPNKQKAMARHNNHLPFSELV 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           G              + RHL+ +G   + +  ++   +    E   L 
Sbjct: 142 G-------------SIQRHLHPNGEAWLLLPRSELHALEACLEKTDLT 176


>gi|268594824|ref|ZP_06128991.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02]
 gi|268596794|ref|ZP_06130961.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268603724|ref|ZP_06137891.1| methyltransferase [Neisseria gonorrhoeae PID1]
 gi|268682195|ref|ZP_06149057.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684346|ref|ZP_06151208.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268548213|gb|EEZ43631.1| hypothetical protein NGBG_01115 [Neisseria gonorrhoeae 35/02]
 gi|268550582|gb|EEZ45601.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268587855|gb|EEZ52531.1| methyltransferase [Neisseria gonorrhoeae PID1]
 gi|268622479|gb|EEZ54879.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268624630|gb|EEZ57030.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|317164270|gb|ADV07811.1| hypothetical protein NGTW08_0843 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 135

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 12/135 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               + +    F P     L         L            D+GTG+G +   L K+  
Sbjct: 1   MGGSIHVPFGVFSPLRGEYL-------DLLAHAPSTGFQTAFDIGTGSGVLAAILAKQG- 52

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
               +G D + +A+  A++N    G  ++ +  ++D F   EG  D+IV NPP + +   
Sbjct: 53  IPSVIGTDTNPRAVACARANIARLGFEKQVEIRETDLFP--EGFADLIVCNPPRLPAKPT 110

Query: 181 DCLGLEVRDFDPRIS 195
             +  E   +DP  +
Sbjct: 111 SAV--ESALYDPESA 123


>gi|227879343|ref|ZP_03997207.1| methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256844518|ref|ZP_05550004.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849093|ref|ZP_05554526.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262047575|ref|ZP_06020530.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US]
 gi|293381049|ref|ZP_06627070.1| methyltransferase small domain protein [Lactobacillus crispatus
           214-1]
 gi|295692235|ref|YP_003600845.1| methyltransferase small [Lactobacillus crispatus ST1]
 gi|312977928|ref|ZP_07789674.1| 16S RNA methylase [Lactobacillus crispatus CTV-05]
 gi|227861064|gb|EEJ68719.1| methyltransferase [Lactobacillus crispatus JV-V01]
 gi|256613596|gb|EEU18799.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713869|gb|EEU28857.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572151|gb|EEX28716.1| 16S RNA methylase RsmC [Lactobacillus crispatus MV-3A-US]
 gi|290922349|gb|EFD99330.1| methyltransferase small domain protein [Lactobacillus crispatus
           214-1]
 gi|295030341|emb|CBL49820.1| Methyltransferase small [Lactobacillus crispatus ST1]
 gi|310895235|gb|EFQ44303.1| 16S RNA methylase [Lactobacillus crispatus CTV-05]
          Length = 206

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 38/186 (20%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ T  +  F   R +  + +L+ +      P+        ILD+GTG G + L   K 
Sbjct: 31  DLKFTTDAGVFSKMRVDYGSGVLIKAMKDVVFPKDN------ILDVGTGYGPIGLFAAKF 84

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
            P      VD++ + L +AK NA  N + +  +   SD +  V+    F +I++NPP   
Sbjct: 85  WPDQTVDMVDVNERGLSLAKQNAQVNHI-DNVNIYSSDCYEHVDNDKKFGLILTNPPIRA 143

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-DV 235
                                    G      I  G + HL   G+  V I   Q     
Sbjct: 144 -------------------------GKKVVNEILLGANEHLVNGGILLVVIQKKQGEPSA 178

Query: 236 VRIFES 241
            ++  +
Sbjct: 179 RKLMTN 184


>gi|168211815|ref|ZP_02637440.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170710232|gb|EDT22414.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 256

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      + +   FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|271499193|ref|YP_003332218.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
 gi|270342748|gb|ACZ75513.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
          Length = 342

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V +      F     +   +DS     L  +E     ++LDL  G G +  +  + SP 
Sbjct: 166 GVPVRTLPGVF-----SREGLDSGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+S  ALE +++    NG+  +   + S+ +S ++G FD+I+SNPP+       
Sbjct: 221 IRLTLSDVSAAALEASQATLAANGLEGQV--IASNAYSDIQGRFDLIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L     +  G + HLN +G  
Sbjct: 273 ---------------DGMQTSLHAAEMMIRGAAAHLNIEGEL 299


>gi|168334101|ref|ZP_02692314.1| Methyltransferase type 11 [Epulopiscium sp. 'N.t. morphotype B']
          Length = 248

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 24/189 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +L  +   F    +  LL        +         +ILD+GTGTG + L L      
Sbjct: 17  GYKLIQNPKAFCFGIDAVLLAHFVSGIKIDS-------KILDIGTGTGIIPLILYAIHKK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIES 177
            K VG+DI    +E+A    + N VS   +    D          G FD+IVSNPPY+++
Sbjct: 70  GKFVGIDIQEAMVEMASRTMMLNQVSNEIEIKCLDIKNFGQDFKRGSFDIIVSNPPYMKA 129

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       +   +  ++ D           I    +  L + G   +    N+ VD
Sbjct: 130 ETGLKNSSATKTIARHE--VACD--------LEDIIKASNFILKERGQLFLIHRANRLVD 179

Query: 235 VVRIFESRK 243
           ++ +    K
Sbjct: 180 ILNLLRQNK 188


>gi|147677215|ref|YP_001211430.1| ribosomal protein L11 methyltransferase [Pelotomaculum
           thermopropionicum SI]
 gi|189037699|sp|A5D3Y3|PRMA_PELTS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146273312|dbj|BAF59061.1| ribosomal protein L11 methylase [Pelotomaculum thermopropionicum
           SI]
          Length = 308

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKR 96
           W+ +Y       RL +     + R E   LV                  L   L     R
Sbjct: 110 WKKYYKPVRAGRRLVVKPSWEDYRAEEGDLVIEMDPGMAFGSGTHATTCLCLRLLEKYVR 169

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+GTG+G + +A  +     + V VDI   A  +A  NA  NGV+ +   +Q +
Sbjct: 170 PGGTVYDVGTGSGVLAVAAARLGAG-RVVAVDIDPLACRVAAGNAERNGVAGKVQVVQGN 228

Query: 157 WFSSVEGLFDVIVSN 171
               VEG  D++V+N
Sbjct: 229 LLEKVEGRADLVVAN 243


>gi|317050697|ref|YP_004111813.1| methyltransferase small [Desulfurispirillum indicum S5]
 gi|316945781|gb|ADU65257.1| methyltransferase small [Desulfurispirillum indicum S5]
          Length = 241

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 61/178 (34%), Gaps = 17/178 (9%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              + R      +D  L      +  R   R+LD+GTG+G + L L           V++
Sbjct: 14  RVKQYRDGYRFGIDPVLLARFTPVASRR--RVLDIGTGSGVIPLLLAYLYGVQALHAVEL 71

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPY--IESVIVDCLGLE 186
             +  ++A+ N   N      D  + ++        FD I SNPPY    S  +      
Sbjct: 72  QPELADLARENFREN--QVNVDLFEGNFLEYEPAEAFDYIFSNPPYRKHSSGEMATGQRR 129

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +   +  ++L            +    S  L   G  S+ I   +  ++ +      L
Sbjct: 130 LARHESLMTL----------EQMIAHASPMLRGGGSLSLVILTERFAELTQYLRRHNL 177


>gi|325912058|ref|ZP_08174456.1| ribosomal protein L11 methyltransferase [Lactobacillus iners UPII
           143-D]
 gi|325476008|gb|EGC79176.1| ribosomal protein L11 methyltransferase [Lactobacillus iners UPII
           143-D]
          Length = 310

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +    K    DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASKVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +D+I++N                      ++             +   +S HL ++
Sbjct: 234 VNGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GRVIMSGIDCEQLSRIEKLLSENGFT 290


>gi|271965241|ref|YP_003339437.1| methylase of polypeptide chain release factors-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270508416|gb|ACZ86694.1| Methylase of polypeptide chain release factors- like protein
           [Streptosporangium roseum DSM 43021]
          Length = 227

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 27/193 (13%)

Query: 43  VRSLKHESIHR---ILGWRDFY--NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKR 96
            R      + R   I   ++F    +   L    + P   ++  L           I   
Sbjct: 5   ARQAAGSLLARHREITLRQNFRLLGLDWDLLPGVYAPHLSQSSAL-------YAEWIPYP 57

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + ++G+GTG V +             +D+S  A +  + NA  +GV++R      D
Sbjct: 58  VHGSLCEIGSGTGYVAVTAALRGCDA-VTAIDMSRAAADNTRLNAERHGVADRVRVACGD 116

Query: 157 WFSSV--EGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            FS +  +  FD+I  N  ++   S       LE   FDP         G + +      
Sbjct: 117 MFSPLSADDRFDLIYWNSNFVEAPSGEAAADDLERAFFDP---------GYTAHDAFLRD 167

Query: 213 VSRHLNKDGLCSV 225
              HLN  G   +
Sbjct: 168 AGEHLNPGGRLML 180


>gi|319956549|ref|YP_004167812.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
 gi|319418953|gb|ADV46063.1| methyltransferase small [Nitratifractor salsuginis DSM 16511]
          Length = 232

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 65/182 (35%), Gaps = 19/182 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L      +    ++  LVD    F       +   ++LD+G G G + L L ++ P  + 
Sbjct: 3   LYQPPQGYCYNSDSIFLVDFIRRF-------KPKGKLLDVGCGVGIISLLLGRDYP-VEV 54

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCL 183
              +   K LE A  N   NG+         D+  + +E  FD+IVSNPP+ +  +    
Sbjct: 55  YLAEKQPKMLEYALHNFTLNGIEA--HAYPGDFLEAQIEERFDLIVSNPPFYDPRVTQSE 112

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              +      I+       L       + V R L   G   +     Q   ++      K
Sbjct: 113 EESL-----NIARYAHHLPLE---PFVERVRRLLRPRGRFILCYDAKQSDRLLAALREAK 164

Query: 244 LF 245
           L 
Sbjct: 165 LT 166


>gi|289743285|gb|ADD20390.1| putative N6-DNA-methyltransferase [Glossina morsitans morsitans]
          Length = 211

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 13/182 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
            + +EP  ++ LL+D AL   L  IE+       L++G G+G +  AL K       + +
Sbjct: 15  ENVYEPSQDSFLLLD-ALEIDLEFIEQELKPNLCLEIGPGSGIIITALAKRLSSTLCLAI 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLE 186
           DI+  A    K  A  NG     + +  +   +V   L D+++ NPPY+ +        E
Sbjct: 74  DINRFATCATKLTAQRNGAE--VECICGNLVDNVRCNLIDLLLFNPPYVVTTD-----EE 126

Query: 187 VRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRK 243
           +RD    +  S  GG  G      +   +   L+  G+   + +  N+  +V+       
Sbjct: 127 IRDAKSSLVHSWAGGKHGRRVIDILLAKLPEILSPRGVLYLLLLKENKPDEVIHALTKLG 186

Query: 244 LF 245
             
Sbjct: 187 FK 188


>gi|302669461|ref|YP_003829421.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
 gi|302393934|gb|ADL32839.1| SAM-dependent methyltransferase [Butyrivibrio proteoclasticus B316]
          Length = 214

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 17/141 (12%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
              +  R LDLGTGTG + + +  ++   + +G++I   + E+A  + + N +  R   +
Sbjct: 11  NAPEGGRCLDLGTGTGIIPILMAAKTNARELIGLEIQEASAEMANRSVLLNDLEARVKIV 70

Query: 154 QSDWFSSVE----GLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           Q D   + +      FDV+ SNPPY+     +        +   + +             
Sbjct: 71  QGDIKEADQLFEAASFDVVTSNPPYMIGGHGLQNPDGPKAIARHEIKC----------DL 120

Query: 207 RTIADGVSRHLNKDGLCSVEI 227
             +    +R L   G   +  
Sbjct: 121 EDVIKAAARCLKSGGKFYMVH 141


>gi|289192410|ref|YP_003458351.1| protein of unknown function DUF890 [Methanocaldococcus sp.
           FS406-22]
 gi|288938860|gb|ADC69615.1| protein of unknown function DUF890 [Methanocaldococcus sp.
           FS406-22]
          Length = 261

 Score = 78.6 bits (193), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 71/177 (40%), Gaps = 14/177 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +++ +    +   P P    L   +   +L ++   +   +L++GTG  A+   L+K
Sbjct: 46  KVLFDLDIEFHENGLIPTPINRYLFIKSTFETLKKL-GIEKPTVLEIGTGHSAIISLLIK 104

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           +    +    ++  + ++ AK N   N ++ +    +      ++      FD+I+S PP
Sbjct: 105 KFYDAEVYATEVDEEFIDFAKKNVERNKLNIKIINSKGKVIEGIKEIKGKKFDLIISYPP 164

Query: 174 YIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     V       R F   ++     + GG  G      I +     LNK G+ ++
Sbjct: 165 FYSKNSVASG----RKFGGALAKEIELIGGGKFGEEFSFKIIEEGINFLNKKGVIAL 217


>gi|323497775|ref|ZP_08102789.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM
           21326]
 gi|323317122|gb|EGA70119.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio sinaloensis DSM
           21326]
          Length = 237

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 10/149 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-S 159
           +LD+GTGTG + L   + S       +DI   ALE A+SN  T+  S+R    + +    
Sbjct: 44  VLDIGTGTGLLALMCCQRSSNIAVDAIDIDRHALEAARSNFSTSPWSQRITLHKGNVLQH 103

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             +  FD I+ NPPY  S                 +     + LSH  ++       L +
Sbjct: 104 PFDHCFDTIICNPPYFNSGEQSENSA--------RATARHTNTLSHV-SLLQRCWELLTQ 154

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            G  S  +   +    + I  +    L  
Sbjct: 155 TGKASFVLPIVEGERFIEIALASGWHLQR 183


>gi|149197630|ref|ZP_01874680.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
 gi|149139200|gb|EDM27603.1| hypothetical protein LNTAR_20393 [Lentisphaera araneosa HTCC2155]
          Length = 378

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 35/167 (20%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFK------GVGVDISCKALEIAKSNAVTN 144
             I+      ILDLG G G + LAL K     K       V VD + +++E  K N   N
Sbjct: 231 EAIDVIPGENILDLGCGAGLIGLALAKRQNDAKPDHGGSVVLVDSNIRSIECCKKNIEIN 290

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G  E  + + SD + + E  FD+IV NPPY     +                        
Sbjct: 291 GF-ENCEAIASDLYET-EKTFDLIVGNPPYFAGQRIGEY--------------------- 327

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                 +   ++LNK G  ++         +  + +          +
Sbjct: 328 ----FIETAMKYLNKTGRLAIV--SKHGEQLAEVAKDFGFKTTTIKR 368


>gi|238758556|ref|ZP_04619732.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae
           ATCC 35236]
 gi|238703256|gb|EEP95797.1| Ribosomal RNA small subunit methyltransferase C [Yersinia aldovae
           ATCC 35236]
          Length = 347

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS     L    +     +LD+G G G +   L ++SP  K    D+S  A+E +++   
Sbjct: 182 DSGSHLLLSTFSEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  +   + S+ ++ ++G F++I+SNPP+                      DG    
Sbjct: 242 ANNIDAQV--IASNVYTDIKGRFEMIISNPPFH---------------------DGIQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L+    +  G + HL+  G  
Sbjct: 279 LTAAEMLIRGATAHLHVGGKL 299


>gi|170781618|ref|YP_001709950.1| hypothetical protein CMS_1213 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156186|emb|CAQ01328.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 205

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 12/159 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPF 121
           V +  +   F P       VD      L  +        +LD+G G G V L L   +P 
Sbjct: 29  VDVETAGGVFSP-----EHVDQGTLVLLRNVPAPPAEGHLLDVGCGWGPVALDLAIRAPS 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                VD++ +ALE+ ++NA + G+      L  D    +   F  + SNPP    V  +
Sbjct: 84  ATVWAVDVNERALELTRANARSLGLDNVNAVLPGDVPEGLS--FATVWSNPPI--RVGKE 139

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNK 219
            L   + D+ PR++ D     L   R + +D + R L  
Sbjct: 140 VLHQILLDWMPRLAPDADA-WLVVQRNLGSDSLQRWLVD 177


>gi|88854950|ref|ZP_01129616.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
 gi|88816111|gb|EAR25967.1| hypothetical protein A20C1_08803 [marine actinobacterium PHSC20C1]
          Length = 378

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 48/132 (36%), Gaps = 22/132 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K D  R +DLG+GTG +  +L    P    V +D S  A+   +  A  NGV  R +  +
Sbjct: 232 KSDAARAIDLGSGTGVLATSLAVARPKLSVVAIDQSTAAVASTRETADANGVGARVEAAR 291

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  +       D+IV NPP+     V             ++L            +    
Sbjct: 292 EDALTERPTASADLIVCNPPFHTGATVHAG----------VAL-----------RMLADA 330

Query: 214 SRHLNKDGLCSV 225
            R L   G   V
Sbjct: 331 RRVLKPGGELWV 342


>gi|332344450|gb|AEE57784.1| methyltransferase small domain protein [Escherichia coli UMNK88]
          Length = 245

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 99  NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 QTLLTCAAECITEEGFFCVVLPEQIGKSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|313114746|ref|ZP_07800248.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622971|gb|EFQ06424.1| ribosomal protein L11 methyltransferase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 304

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKRD 97
           GWR +Y+      RL +     +   +   L+              ++L           
Sbjct: 108 GWRKYYHPLEIGKRLAVVPSWQQYDTDRVKLILDPGLAFGTGGHETTSLCMEALDERVTG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A   +       GVDI   A+  A  NA  NGV ++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIA-ALKLGAAVAEGVDIDPVAVRTAGENAALNGVQDKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGKYDIITAN 240


>gi|315613500|ref|ZP_07888407.1| methyltransferase [Streptococcus sanguinis ATCC 49296]
 gi|315314191|gb|EFU62236.1| methyltransferase [Streptococcus sanguinis ATCC 49296]
          Length = 249

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  KR +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKRGL--IVDFCAGNGAVGL-FASSRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  ARIISVEIQERLADMAERSVQLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------EEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLKRHNL 191


>gi|308178263|ref|YP_003917669.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307745726|emb|CBT76698.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 529

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 58/164 (35%), Gaps = 18/164 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R +  L +  A         +  V R LDLGTG G     LL  +        
Sbjct: 142 RPGVL--RTDHVLGIGQASLTLAQITIREKVERALDLGTGCGIQLFHLLAHAQ--HVTAT 197

Query: 128 DISCKALEIAKSNAVTN---------GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           D+S +AL   + N + N          +  R   LQ   F  V G  F++I SNPP++  
Sbjct: 198 DVSARALGFTRFNLLLNAQTLNLDPKNLESRVTLLQGSLFEPVAGSTFNLIASNPPFV-- 255

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
             +       R  D     DGG+ G +   T+       L   G
Sbjct: 256 --ITPRSSHERAKDRFTYRDGGMAGDTLVSTLIGQAPVFLAPGG 297


>gi|88855439|ref|ZP_01130103.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1]
 gi|88815346|gb|EAR25204.1| hypothetical protein A20C1_01411 [marine actinobacterium PHSC20C1]
          Length = 207

 Score = 78.6 bits (193), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +D+     L  +        +LDLG G G + L L  ESP      VD++ +AL++ ++N
Sbjct: 43  IDAGTQVLLSNVPAPPPGGNLLDLGCGWGPMALTLALESPHATVWAVDVNERALDLVRAN 102

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A    +      L  D    V   F  I SNPP    V  D L   +  + PR+ LD   
Sbjct: 103 AKKLSIPNINAVLPGDVPEDV--TFMSIWSNPPI--RVGKDELHNILETWLPRLELDADA 158


>gi|193216593|ref|YP_001999835.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1]
 gi|193001916|gb|ACF07131.1| predicted O-methyltransferase [Mycoplasma arthritidis 158L3-1]
          Length = 263

 Score = 78.2 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 27/184 (14%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   I  R+V  IL++GT  GA+ + +   +P      V+I   A+EIA  N 
Sbjct: 29  VDTILLGNFIAI-NRNVSNILEVGTNNGALAIFVASRNPKITIDAVEIQHDAIEIANENV 87

Query: 142 VTNGVSERFDTLQSD-----------WFSSVEGLFDVIVSNPPYIESVIVD-----CLGL 185
             NG+ ++   ++ D             + +   +  I++NPPY             +  
Sbjct: 88  KMNGLDKQIRVIEGDFKKYAKDYAYRCGNQMAKKYSSIIANPPYYNENYNQTKTSGTMAQ 147

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           ++   +  ++L            +    S+ + + G  ++ +   + VD++         
Sbjct: 148 KLATHEINLTL----------EELISSASKIIEQKGYLTMVMPMARYVDLICALRKYNFE 197

Query: 246 LVNA 249
               
Sbjct: 198 PKRV 201


>gi|157371913|ref|YP_001479902.1| methyltransferase small [Serratia proteamaculans 568]
 gi|262828677|sp|A8GI34|TRMN6_SERP5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157323677|gb|ABV42774.1| methyltransferase small [Serratia proteamaculans 568]
          Length = 260

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 17/163 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G+G+G + L L +  +   +   V++   A   A  N + +  S R 
Sbjct: 53  WAPLAQAQRVLDIGSGSGLIALMLAQRTAENVQIDAVELDEAAAAQAHDNVLESPWSLRI 112

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSH 205
                D         G +D+IVSNPPY E  +   D      R  +              
Sbjct: 113 QVHAQDIHHFAQHHAGQYDLIVSNPPYFEPAVACRDQARHNARYTETLT----------- 161

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  +     + +   G   V + ++           R      
Sbjct: 162 HDALLASAEQLIVPQGTFCVVLPHDIGEAFETNAHRRGWHTAQ 204


>gi|292656862|ref|YP_003536759.1| methylase [Haloferax volcanii DS2]
 gi|291370867|gb|ADE03094.1| methylase, putative [Haloferax volcanii DS2]
          Length = 198

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 24/185 (12%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +++  ++P  ++ LL  +A+         R   R+L++GTG+G V   L  ++     V 
Sbjct: 10  MNTSVYQPAEDSGLLAQAAV--------GRVSGRVLEVGTGSGWVAEQLATKT-DADVVA 60

Query: 127 VDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
            D++  A   A   A          F+ ++        +  FD +  NPPY+   +    
Sbjct: 61  SDLNPHACRQAAERAAALRADGHRGFEVVRGSLVEPFRDDAFDAVAFNPPYLPEDLEAAR 120

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYNQKVDVVRIF 239
              +      ++L GG DG        D V R L   G   + +    GY+   +V+   
Sbjct: 121 DDWM-----EVALTGGEDGREIIDPFLDTVGRVLKPGGTVFLLVSSFTGYD---EVLARA 172

Query: 240 ESRKL 244
           E+   
Sbjct: 173 EANGF 177


>gi|289427618|ref|ZP_06429330.1| methyltransferase small domain protein [Propionibacterium acnes
           J165]
 gi|289159109|gb|EFD07301.1| methyltransferase small domain protein [Propionibacterium acnes
           J165]
 gi|313808788|gb|EFS47242.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA2]
 gi|313819880|gb|EFS57594.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA1]
 gi|313823372|gb|EFS61086.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA2]
 gi|313824844|gb|EFS62558.1| methyltransferase small domain protein [Propionibacterium acnes
           HL063PA1]
 gi|314925808|gb|EFS89639.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA3]
 gi|314979789|gb|EFT23883.1| methyltransferase small domain protein [Propionibacterium acnes
           HL072PA2]
 gi|314986105|gb|EFT30197.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA2]
 gi|315083347|gb|EFT55323.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA2]
 gi|315089971|gb|EFT61947.1| methyltransferase small domain protein [Propionibacterium acnes
           HL072PA1]
 gi|327325122|gb|EGE66928.1| putative methyltransferase small domain protein [Propionibacterium
           acnes HL096PA3]
 gi|327449323|gb|EGE95977.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA2]
 gi|328756333|gb|EGF69949.1| methyltransferase small domain protein [Propionibacterium acnes
           HL020PA1]
 gi|332676208|gb|AEE73024.1| methylase-like protein [Propionibacterium acnes 266]
          Length = 206

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +       V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP--------IRVGKAALHEILTTWLA---------RLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRIIDVH 205


>gi|156741118|ref|YP_001431247.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
 gi|156232446|gb|ABU57229.1| methyltransferase small [Roseiflexus castenholzii DSM 13941]
          Length = 198

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 30/148 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L  I  +    ILDLG G G + + L +  P  + + VD    A+  A+ NA
Sbjct: 39  VDEGTDLFLRTIAPQTPQTILDLGCGCGVIGIVLARWFPQARVILVDRDLLAVRYARHNA 98

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGG 199
             N  +   + + S  F  V    FD+IVSN P         +G E  + +  ++ LD  
Sbjct: 99  ALNQ-TPNVEVIGSVGFEYVPDIPFDLIVSNIP-------AKIGDEAIEHEFILAPLD-- 148

Query: 200 IDGLSHYRTIADGVSRHLNKDG--LCSV 225
                           HL   G     V
Sbjct: 149 ----------------HLRPGGEYWFVV 160


>gi|309972420|gb|ADO95621.1| Putative methyltransferase [Haemophilus influenzae R2846]
          Length = 240

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 38  WTDVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 97

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLIQTDIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y+    +++
Sbjct: 149 --WLEWAATRLSENGRISFVLPYDAGKTLIK 177


>gi|304389605|ref|ZP_07371567.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304327158|gb|EFL94394.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 214

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 33/167 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F+++
Sbjct: 74  VDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAAL 133

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                DVI SNPP             VR    +++L            + +     L  +
Sbjct: 134 GPNSVDVIWSNPP-------------VRVG--KMAL----------HAMWEAWRTRLKPE 168

Query: 221 GLCSVEIGYNQKVD-VVRIFESRKLF--LVNAFKDYGGNDRVLLFCR 264
           G+  + +G N   D  +            + + K   G  RVL   R
Sbjct: 169 GVAYLVMGRNLGSDPFLAYLNEHGWTGEKIASSK---GF-RVLQLRR 211


>gi|288934044|ref|YP_003438103.1| methyltransferase small [Klebsiella variicola At-22]
 gi|288888773|gb|ADC57091.1| methyltransferase small [Klebsiella variicola At-22]
          Length = 245

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V  +LD+G G+G + L L + +    +   V++  +A   A+ NA+ +  S R 
Sbjct: 39  WAPIAGVKHVLDIGAGSGLLALMLAQRTGHDVQVDAVELDEEAAAQARENALASPWSSRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  Q+D   W  S    +++I+SNPP+    +       E   +    +LD        +
Sbjct: 99  EVCQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++    + H+ ++G   V +  +     +    +    L
Sbjct: 149 ASLLTCAAEHITEEGFFCVVLPVDIGNAFIERATAMGWHL 188


>gi|71064634|ref|YP_263361.1| hypothetical protein Psyc_0053 [Psychrobacter arcticus 273-4]
 gi|71037619|gb|AAZ17927.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 404

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 74/208 (35%), Gaps = 29/208 (13%)

Query: 56  GWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           GWR       N+ L++        P     V   L   LP +         D+GTGTG +
Sbjct: 181 GWRVKGVAIENLGLSIFPHYGVFAPTRHEYVQLLLDAPLPAVYD----VAFDIGTGTGLL 236

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            + L +     + +  D++ +AL  A  N     +       Q+D + +   L +++V N
Sbjct: 237 AIILAQRGVK-QVIATDLNPRALACASENLARLELPA-VQLQQADLYPTDAPLANLLVCN 294

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY-- 229
           PP++ +     L   V D +  +            R       +HL + G   + +    
Sbjct: 295 PPWLPAKPTSPLEFAVYDANSTM-----------LRGFLQSAKQHLAEHGEVWLILSDLA 343

Query: 230 -----NQKVDVVRIFESRKLFLVNAFKD 252
                  + +++  F +  L  V    D
Sbjct: 344 EHLQLRSRDELLSWFANAGL-EVKYRLD 370


>gi|328883362|emb|CCA56601.1| hypothetical protein SVEN_3315 [Streptomyces venezuelae ATCC 10712]
          Length = 516

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +        D++ +AL+  +     +G  E  + L 
Sbjct: 160 RTPVASALDLGTGSGIQALHAAQHATL--VTATDLNPRALDFTRLTLALSGARE-AELLT 216

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V+G  +D+IVSNPP++ S                   DGG+ G    RT+    
Sbjct: 217 GSLFEPVDGDTYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQA 265

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
              LN  G       +    
Sbjct: 266 GERLNDGGYAQFLANWRHVE 285


>gi|119946653|ref|YP_944333.1| rRNA (guanine-N(2)-)-methyltransferase [Psychromonas ingrahamii 37]
 gi|226712969|sp|A1SZ19|RSMC_PSYIN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|119865257|gb|ABM04734.1| 16S rRNA m(2)G 1207 methyltransferase [Psychromonas ingrahamii 37]
          Length = 349

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 23/143 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +  +   R+LD G G G +   +LK+ P      VDI+  AL  AK +  
Sbjct: 193 DKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDINAFALASAKLSLQ 252

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +N +        S+ FS ++  +++++SNPP+      D    E                
Sbjct: 253 SNQLEGNVFP--SNVFSDIKEKYNILLSNPPFHSGKNTDYTAAE---------------- 294

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                T  +  + HL   G  S+
Sbjct: 295 -----TFINQSTNHLKSKGKLSI 312


>gi|22127624|ref|NP_671047.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis KIM
           10]
 gi|45443486|ref|NP_995025.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108809848|ref|YP_653764.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Antiqua]
 gi|108810463|ref|YP_646230.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Nepal516]
 gi|145600460|ref|YP_001164536.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Pestoides F]
 gi|150260533|ref|ZP_01917261.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CA88-4125]
 gi|153946974|ref|YP_001402462.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162419874|ref|YP_001605415.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Angola]
 gi|165927283|ref|ZP_02223115.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165936497|ref|ZP_02225065.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009029|ref|ZP_02229927.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211827|ref|ZP_02237862.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400573|ref|ZP_02306082.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167419039|ref|ZP_02310792.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167426101|ref|ZP_02317854.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167469141|ref|ZP_02333845.1| methyltransferase family protein [Yersinia pestis FV-1]
 gi|170025851|ref|YP_001722356.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|218927628|ref|YP_002345503.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis CO92]
 gi|229836992|ref|ZP_04457157.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A]
 gi|229840310|ref|ZP_04460469.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842389|ref|ZP_04462544.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900651|ref|ZP_04515775.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516]
 gi|270487989|ref|ZP_06205063.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27]
 gi|294502525|ref|YP_003566587.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Z176003]
 gi|122980358|sp|Q1CN00|RSMC_YERPN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123245407|sp|Q1C153|RSMC_YERPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|123776538|sp|Q7CG56|RSMC_YERPE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725327|sp|A7FMI4|RSMC_YERP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725329|sp|A9R058|RSMC_YERPG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725330|sp|A4TQK1|RSMC_YERPP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725331|sp|B1JL46|RSMC_YERPY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|21960735|gb|AAM87298.1|AE013978_10 putative enzyme [Yersinia pestis KIM 10]
 gi|45438355|gb|AAS63902.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108774111|gb|ABG16630.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Nepal516]
 gi|108781761|gb|ABG15819.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Antiqua]
 gi|115346239|emb|CAL19108.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CO92]
 gi|145212156|gb|ABP41563.1| 16S rRNA m(2)G 1207 methyltransferase [Yersinia pestis Pestoides F]
 gi|149289941|gb|EDM40018.1| ribosomal RNA small subunit methyltransferase C [Yersinia pestis
           CA88-4125]
 gi|152958469|gb|ABS45930.1| methyltransferase family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162352689|gb|ABX86637.1| methyltransferase family protein [Yersinia pestis Angola]
 gi|165915613|gb|EDR34222.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165920745|gb|EDR37993.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992368|gb|EDR44669.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206573|gb|EDR51053.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166963033|gb|EDR59054.1| methyltransferase family protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049941|gb|EDR61349.1| methyltransferase family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167055024|gb|EDR64824.1| methyltransferase family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169752385|gb|ACA69903.1| rRNA (guanine-N(2)-)-methyltransferase [Yersinia pseudotuberculosis
           YPIII]
 gi|229681990|gb|EEO78082.1| 16S rRNA m2G1207 methylase [Yersinia pestis Nepal516]
 gi|229690699|gb|EEO82753.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696676|gb|EEO86723.1| 16S rRNA m2G1207 methylase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705935|gb|EEO91944.1| 16S rRNA m2G1207 methylase [Yersinia pestis Pestoides A]
 gi|262360555|gb|ACY57276.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           D106004]
 gi|270336493|gb|EFA47270.1| methyltransferase small domain N-terminal [Yersinia pestis KIM D27]
 gi|294352984|gb|ADE63325.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia pestis
           Z176003]
          Length = 347

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y    V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGGVTVKTLPGVF---SRDSL--DSGSHLLLSTFNEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|206577582|ref|YP_002237081.1| putative methyltransferase [Klebsiella pneumoniae 342]
 gi|262828515|sp|B5XNG1|TRMN6_KLEP3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|206566640|gb|ACI08416.1| putative methyltransferase [Klebsiella pneumoniae 342]
          Length = 245

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V  +LD+G G+G + L L + +    +   V++  +A   A+ NA+ +  S R 
Sbjct: 39  WAPIAGVKHVLDIGAGSGLLALMLAQRTDHDVQVDAVELDEEAAAQARENALASPWSSRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  Q+D   W  S    +++I+SNPP+    +       E   +    +LD        +
Sbjct: 99  EVCQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++    + H+ ++G   V +  +     +    +    L
Sbjct: 149 ASLLTCAAEHITEEGFFCVVLPVDIGNAFIERATAMGWHL 188


>gi|307129409|ref|YP_003881425.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii
           3937]
 gi|306526938|gb|ADM96868.1| Ribosomal RNA small subunit methyltransferase C [Dickeya dadantii
           3937]
          Length = 342

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V +      F     +   +D+     L  +E     ++LDL  G G +  +  + SP 
Sbjct: 166 GVPVHTLPGVF-----SREGLDTGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPK 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    D+   ALE ++S    NG+  +   + S+ +S ++G FD+I+SNPP+ + +   
Sbjct: 221 IRLTLSDVGAAALEASRSTLAANGLEGQV--IASNAYSDIQGRFDLIISNPPFHDGMQTS 278

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
               EV                     +  G + HLN +G  
Sbjct: 279 LHAAEV---------------------MIRGAASHLNIEGEL 299


>gi|148981816|ref|ZP_01816533.1| predicted O-methyltransferase [Vibrionales bacterium SWAT-3]
 gi|145960724|gb|EDK26064.1| predicted O-methyltransferase [Vibrionales bacterium SWAT-3]
          Length = 124

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 1/88 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            +        LD+GTGTG + L   +         +DI   A+E A  N   +   +R  
Sbjct: 37  WVSITPKSSALDIGTGTGLLALMAAQRFTDISISAIDIDPHAIEAATINIEQSPWQDRIT 96

Query: 152 TLQSDWF-SSVEGLFDVIVSNPPYIESV 178
                   +     FD I+ NPPY  S 
Sbjct: 97  LHNGSVLTTDFPKKFDAIICNPPYFNSG 124


>gi|124006526|ref|ZP_01691359.1| SmtA protein [Microscilla marina ATCC 23134]
 gi|123987939|gb|EAY27619.1| SmtA protein [Microscilla marina ATCC 23134]
          Length = 241

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 14/162 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                 ++LD+GTGTG + L L + +       V+I   A   AK+N   +  + R +  
Sbjct: 35  PAPHTQQVLDIGTGTGLLSLMLAQRTSNLDITAVEIDEAAYNQAKANIEASPWATRIEVH 94

Query: 154 Q---SDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                 +       + +I++NPP+ E+ +    L           +L    D L     +
Sbjct: 95  HQAIQHFAQKHPAQYGLIMTNPPFFENHLKTQNLSQNRALH--SEAL-SFNDLLIAIDKL 151

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                  L  DG  +V +   Q            L +    +
Sbjct: 152 -------LAPDGTLAVLLPMYQMEVFTTKAGDYGLQVFEQLQ 186


>gi|187777347|ref|ZP_02993820.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC
           15579]
 gi|187774275|gb|EDU38077.1| hypothetical protein CLOSPO_00899 [Clostridium sporogenes ATCC
           15579]
          Length = 246

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 21/181 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              + R      +D+ L  + PRI+  D   ++DL TGTG +   L  ++     +G++I
Sbjct: 20  HVIQKRQAFRFGIDAVLLANFPRIKNGD--EVVDLCTGTGIIPFILAGKTNASNIIGIEI 77

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDC 182
             +  ++AK +   N + E+   ++ D         +E   DV+  NPPY    + I++ 
Sbjct: 78  QKEIADMAKRSIKYNNLQEKVKFIEGDLKDIKLLKDIE-KADVVTVNPPYKTQGTGIINI 136

Query: 183 LGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                +   +   +LD           +       L   G   +    ++ VD++ +   
Sbjct: 137 NDKNAISRHEICCTLD----------DVVKAAKILLKDKGKLYMIHRPDRIVDIMNVMRK 186

Query: 242 R 242
            
Sbjct: 187 Y 187


>gi|218288634|ref|ZP_03492911.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241291|gb|EED08466.1| ribosomal protein L11 methyltransferase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 316

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 40/164 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R++D+GTGTG + +A        + V +D+   A+  A  N   NG+ +R D  Q 
Sbjct: 176 RPGMRVVDVGTGTGVLAIAAALVGAE-RVVAIDLDPVAVSAATDNVRKNGLEDRVDVRQG 234

Query: 156 DWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           D  +++  +  FD+ V+N   I   +V  L  +VR   PR                    
Sbjct: 235 DLLAALRPDETFDLAVAN---ILRDVVIALVPQVR---PR-------------------- 268

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLV-NAFKD 252
              L   G       +E   +Q+  V          +V  A +D
Sbjct: 269 ---LVPGGWLLTSGYIE---SQREQVEHAIRDHGFSVVRRAHQD 306


>gi|196248969|ref|ZP_03147669.1| ribosomal protein L11 methyltransferase [Geobacillus sp. G11MC16]
 gi|196211845|gb|EDY06604.1| ribosomal protein L11 methyltransferase [Geobacillus sp. G11MC16]
          Length = 315

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 71/223 (31%), Gaps = 56/223 (25%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+  Y+      + T+    +T+EP    EL+++     +            L  +EK
Sbjct: 115 TAWKKHYHPVKVSEKFTIVPTWETYEPASNDELIIEMDPGMAFGTGTHPTTVMCLQALEK 174

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 175 YVHPGDNVIDVGTGSGILSIAAAMLGAHS-VRALDLDPVAIDSARLNVKLNKVQHVVTVA 233

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    ++   DVIV+N                      ++                  
Sbjct: 234 QNNLLDHIDEQADVIVAN---------------------ILA--------EIILRFTADA 264

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLF--LVNAFKD 252
            R L   G      G  Q    DV     +   F   VN  +D
Sbjct: 265 YRLLKPGGRFIT-SGIIQAKKQDVKDGLLAAGFFIEEVNVMED 306


>gi|222054578|ref|YP_002536940.1| methyltransferase small [Geobacter sp. FRC-32]
 gi|221563867|gb|ACM19839.1| methyltransferase small [Geobacter sp. FRC-32]
          Length = 259

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 66/178 (37%), Gaps = 24/178 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +P       +D  L  +  R+  R+  RI DLGTG G + L L K++     VG+D    
Sbjct: 18  QPLNGYRFSLDPILLSNFARL--REGGRIADLGTGCGIIPLLLAKQNKSATIVGIDFQEH 75

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEV 187
              +A+ N + NG  +R   L  D  +S++G      FD++VSNPPY +           
Sbjct: 76  MAALARHNVILNGYDDRVSILTEDI-ASLKGHFPVSSFDLVVSNPPYRKPGTGRVSPKAG 134

Query: 188 RD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           RD    +   +L                    +   G             +V +F   
Sbjct: 135 RDKARHETTATLA----------DFMSMAKYLVKPAGRICFI---YHVSRLVELFAEA 179


>gi|290508240|ref|ZP_06547611.1| O-methyltransferase [Klebsiella sp. 1_1_55]
 gi|289777634|gb|EFD85631.1| O-methyltransferase [Klebsiella sp. 1_1_55]
          Length = 245

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V  +LD+G G+G + L L + +    +   V++  +A   A+ NA+ +  S R 
Sbjct: 39  WAPIAGVKHVLDIGAGSGLLALMLAQRTGHDVQVDAVELDEEAAAQARENALASPWSSRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  Q+D   W  S    +++I+SNPP+    +       E   +    +LD        +
Sbjct: 99  EICQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++    + H+ ++G   V +  +     +    +    L
Sbjct: 149 ASLLTCAAEHITEEGFFCVVLPVDIGNAFIERATAMGWHL 188


>gi|325685704|gb|EGD27783.1| methyltransferase domain protein [Lactobacillus delbrueckii subsp.
           lactis DSM 20072]
          Length = 200

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+ LT  +  F + R +  + LL++  L   LP         ILD+G G G + L   K+
Sbjct: 27  NLNLTTDAGVFSKNRVDYGSGLLIEQMLDQELP------GGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+        +   +   SD +  V G + +IV+NPP     
Sbjct: 81  WPGRQVDMVDVNERAMDLARR-NAAANGAGNVNIFASDRYQEVSGQYAMIVTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G + + +I      HL   G+  V I   Q      +
Sbjct: 138 -----------------------GKAIWSSILSEAKDHLIDGGILLVVIQKKQGAPSAKK 174

Query: 238 IFES 241
           +  +
Sbjct: 175 LMAA 178


>gi|313159331|gb|EFR58695.1| methyltransferase domain protein [Alistipes sp. HGB5]
          Length = 238

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   R T+  D    R   ++  D  L  +   +   D  RILD+GTGTG + L + + +
Sbjct: 2   FRFKRFTIRQD----RCPMKVGTDGVLLGAWAGVRPSDR-RILDVGTGTGLIALMMAQRA 56

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPP-YIES 177
           P  +  GVD+    +  A+ NA  +    R    Q      + +  FD+IVSNPP +++S
Sbjct: 57  PEARITGVDVEE--VSQARENAAASPWGGRVVFEQCPVQEFAPDEHFDLIVSNPPFFVDS 114

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           +     G        R+  D           + D V R L  +G  +V +  ++    V 
Sbjct: 115 LTCPDEGRTTARHAVRLPFD----------QLRDAVVRLLAAEGRFAVILPTDEARRFVD 164

Query: 238 IFE 240
           I  
Sbjct: 165 ICR 167


>gi|163839486|ref|YP_001623891.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC
           33209]
 gi|162952962|gb|ABY22477.1| 16S rRNA m2G1207 methyltransferase [Renibacterium salmoninarum ATCC
           33209]
          Length = 205

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
           L   S  F P       +D   A  L           +LD+G G G + L L  +SP  +
Sbjct: 34  LNTDSGIFSP-----EGIDKGAAVLLAEAPAPASDGDLLDIGCGWGPIALTLALKSPQAR 88

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              VD++ ++L +   NA   G+       Q D        F  I SNPP    V  D L
Sbjct: 89  IHAVDVNERSLALTAENAAALGLG-NVQVSQPDELDP-SIRFQTIWSNPPI--RVGKDVL 144

Query: 184 GLEVRDFDPRI 194
              +R + PR+
Sbjct: 145 HHILRTWLPRL 155


>gi|237732561|ref|ZP_04563042.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908100|gb|EEH94018.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 268

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++   A + A+ N   +    R 
Sbjct: 62  WAPVAGVKRILDIGTGSGLLALMLAQRTDENVIIDAVELDVDAAQQAQENIAQSPWMHRV 121

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   W       FD+I+SNPPY E          E   +    +LD        +
Sbjct: 122 SVHTEDAQQWIPRQTVRFDLIISNPPYYEQGVECATPQREQARY--TTTLD--------H 171

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           + +    +  + ++G   V +         +   S    L     D    +     RVLL
Sbjct: 172 QMLLTLAADSITEEGFFCVVLPEQIGNAFTQQALSMGWHL-RLRTDVAETEARLPHRVLL 230

Query: 262 F 262
            
Sbjct: 231 A 231


>gi|169351613|ref|ZP_02868551.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552]
 gi|169291835|gb|EDS73968.1| hypothetical protein CLOSPI_02393 [Clostridium spiroforme DSM 1552]
          Length = 249

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 81/200 (40%), Gaps = 27/200 (13%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E I+ +L    + N+++    D F    +T LL +            +DV +I+D GT  
Sbjct: 9   EVINYLL---AYNNLKIIQRKDMFNFSLDTVLLANFCTIT-------KDVKKIVDFGTNN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFD 166
            A+ L +L        +GV+I  +A+E+AK N   N +  +   + SD    V       
Sbjct: 59  AAIPL-ILSRRTNKPIIGVEIQKEAVELAKKNITLNSLDNQIKIVHSDIKEFVNDSIKVG 117

Query: 167 VIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           ++V NPP+ +      L       +   + +I+L            I    ++ L+  G 
Sbjct: 118 LVVCNPPFFKVDEDSNLNDNEFLTIARHEIKINL----------EEIIKSAAKILDNRGK 167

Query: 223 CSVEIGYNQKVDVVRIFESR 242
            ++     + ++++ + +  
Sbjct: 168 FAMVHRPQRMIEILNLMQKY 187


>gi|270290327|ref|ZP_06196552.1| methyltransferase [Pediococcus acidilactici 7_4]
 gi|304384854|ref|ZP_07367200.1| methyltransferase [Pediococcus acidilactici DSM 20284]
 gi|270281108|gb|EFA26941.1| methyltransferase [Pediococcus acidilactici 7_4]
 gi|304329048|gb|EFL96268.1| methyltransferase [Pediococcus acidilactici DSM 20284]
          Length = 250

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 25/191 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  S   F         +D+ L  +   +++    +I+DL  G GAV L L K++  
Sbjct: 18  NIQIIQSPSVFSFS------LDAVLLANFAEVKQSSKAQIVDLCAGNGAVGLFLSKKT-N 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +  E+A+ + + N + ER+  L      S+        D IV NPPY  +
Sbjct: 71  GHVTMVEIQSRLAEMAERSILLNDLGERYRVLNLPLADSLGTIKTDSVDSIVCNPPYFPN 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL+           I +   + L  +G   +    ++  
Sbjct: 131 HPDSKKNPNQFLAIARHEITTSLN----------EILETSQKMLKMNGKLFMVHRPDRLP 180

Query: 234 DVVRIFESRKL 244
           +++  F   +L
Sbjct: 181 EIINDFTQNRL 191


>gi|311695156|gb|ADP98029.1| rRNA (guanine-N2-)-methyltransferase, RsmD [marine bacterium HP15]
          Length = 385

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 21/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LDL  G G + LA L E    + V  D+S +A+  A+ N        +      
Sbjct: 241 RAGDSVLDLACGNGVLGLAALSERRDLQLVFSDVSSQAVLSARRNVEKAFPDAKAAFSHR 300

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D   S  G FD+I+ NPP+                +      GG+ G      + +  S+
Sbjct: 301 DGIESDLGAFDLILLNPPF---------------HE------GGVVGDHIALRLFEQASQ 339

Query: 216 HLNKDGLCSV 225
           HL   G   +
Sbjct: 340 HLRPGGRLLL 349


>gi|300744004|ref|ZP_07073024.1| putative methyltransferase small domain protein [Rothia
           dentocariosa M567]
 gi|300380365|gb|EFJ76928.1| putative methyltransferase small domain protein [Rothia
           dentocariosa M567]
          Length = 209

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 4/117 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D   A  L ++ +     +LD+G G G + L+L   +P  +  G+D++ ++L + + NA
Sbjct: 43  IDKGTAVLLEQVPEPHGKYMLDIGCGWGPITLSLAMLAPQSEVYGIDVNSRSLSLTEQNA 102

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              G+         D        FD I SNPP    V  + L   +  + PR++  G
Sbjct: 103 RALGM-HNVSVSTPDEIDPTL-RFDTIWSNPPI--RVGKEVLHNILLTWLPRLAPGG 155


>gi|332291489|ref|YP_004430098.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169575|gb|AEE18830.1| methyltransferase small [Krokinobacter diaphorus 4H-3-7-5]
          Length = 253

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 23/164 (14%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+GTGTG + L L + S       V++   A E A  N   +   +R     +  
Sbjct: 39  PDSILDIGTGTGVIALMLAQRSDAMTVDAVELDDSAYEQAADNFENSVWGDRLFCYHAHL 98

Query: 158 FS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH--------- 205
           +     ++  +D+IV NPP+    + D      R            DG +          
Sbjct: 99  YEFAAEIDDEYDLIVCNPPFYMETLNDESTALQRS-------RSIKDGAAIEAREQARLE 151

Query: 206 ----YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
               +  +   V++ L++DG  SV I + ++ D + +     LF
Sbjct: 152 ESMPFELLVGAVAKLLSEDGAFSVIIPHEREDDFILLCSRAGLF 195


>gi|227112915|ref|ZP_03826571.1| hypothetical protein PcarbP_08124 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 248

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 15/139 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R 
Sbjct: 42  WTPVSSATRVLDIGSGSGLLALMLAQRSEPHVQIDAVELDSAASDQAKENVAASPWADRI 101

Query: 151 DTLQSDWFSSVEGL---FDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
                D  S  E     + +I+SNPPY    I       +   +            L  +
Sbjct: 102 TVYAEDIVSFAETRAATYSLIISNPPYFPPGIACGSAQRDQARY----------TTLLTH 151

Query: 207 RTIADGVSRHLNKDGLCSV 225
             +     + L  +GL  V
Sbjct: 152 EALLRCAHQLLVPEGLFCV 170


>gi|15606087|ref|NP_213464.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
 gi|2983274|gb|AAC06868.1| hypothetical protein aq_674 [Aquifex aeolicus VF5]
          Length = 239

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 19/158 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+P+ E ++ VD  L  S  +  KR+  RI+DLG G G + + L K+    K V  +   
Sbjct: 20  FQPK-EHKISVDLVLFLSKIKPPKRNY-RIIDLGAGFGFLSITLAKKY-GVKVVAFEYDE 76

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEV 187
           + +++ + N   NGV    + ++ D     +    G F+++VSNPP+           E 
Sbjct: 77  RMVKLLRKNVKLNGVEHLVEVVEGDIKEIEKHLSRGSFNLVVSNPPFYPINYSPN--PEP 134

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             F+   +L          +      S  L   G   +
Sbjct: 135 YHFEVYATL----------KDFVRASSYLLKDGGELYL 162


>gi|315231426|ref|YP_004071862.1| RNA methyltransferase [Thermococcus barophilus MP]
 gi|315184454|gb|ADT84639.1| RNA methyltransferase [Thermococcus barophilus MP]
          Length = 241

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   +IL++GTG  A+   +  +    +    +I  +  E AK N   N V  +    + 
Sbjct: 74  RGGEKILEIGTGHSALMAIMAAKLFNCEAWATEIDEEFFEYAKRNIECNKVQVKLIKSKG 133

Query: 156 DWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                +      FDVI S PPY E      L        P  ++ GG  G      +   
Sbjct: 134 QIIKGLIPEGEKFDVIFSAPPYYEKPTKGVLT-------PIEAVGGGEYGEKFSLKLLRE 186

Query: 213 VSRHLNKDGLCSV 225
              +L   G  ++
Sbjct: 187 AKDYLKPKGKVAL 199


>gi|298207515|ref|YP_003715694.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus
           HTCC2559]
 gi|83850151|gb|EAP88019.1| hypothetical protein CA2559_04650 [Croceibacter atlanticus
           HTCC2559]
          Length = 236

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 15/172 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  +I       ILD+G GTG + L + + S   +   V++   A E    N  
Sbjct: 21  DAVLLGAWVKIS-DSCSSILDVGAGTGVIALQMAQRSNAEQIDAVEVDGDAYEQTVENFE 79

Query: 143 TNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            +   +R     + +   VE L     +D+I+ NPP+             RD     +  
Sbjct: 80  NSDWGDRLFCYHASFIQLVEELEGDEFYDLIICNPPFFSEDYKSNTSQ--RD----QARF 133

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
              D L   + +  GVS+ L+ +G  SV I ++++   + I +   L+  + 
Sbjct: 134 --QDALPF-QDLISGVSKLLSPNGQFSVIIPFSEEQKFIEIAKEHNLYPQHI 182


>gi|331266025|ref|YP_004325655.1| S-adenosylmethionine-dependent methyltransferase [Streptococcus
           oralis Uo5]
 gi|326682697|emb|CBZ00314.1| S-adenosylmethionine-dependent methyltransferase [Streptococcus
           oralis Uo5]
          Length = 249

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  KR +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKRGL--IVDFCAGNGAVGL-FASSRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  ARIISVEIQERLADMAERSVQLNGLEEQMQVICDDLKNMPAYIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------KEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLQRHNL 191


>gi|269978122|ref|ZP_06185072.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
 gi|269933631|gb|EEZ90215.1| 16S rRNA m2G1207 methyltransferase [Mobiluncus mulieris 28-1]
          Length = 272

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 33/192 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLAL 115
             +   +   + +D+     +    +D   A  L ++ K  +    +D+G G G + L +
Sbjct: 89  EVELAGMTFRIHTDSGVFSGDG---LDKGTAVLLRKVPKLPEGGVFVDVGCGWGPLSLVM 145

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
            ++ P  + V VD++ +AL++   NA  NG+       ++   + + +G  DVI SNPP 
Sbjct: 146 ARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLAETAALAQLADGSVDVIWSNPP- 204

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
                       VR          G D L    T      R  L   G+  + +G N   
Sbjct: 205 ------------VRI---------GKDALHAMWT----AWRVKLRPGGVAYLVMGRNLGA 239

Query: 234 DV-VRIFESRKL 244
           D           
Sbjct: 240 DTFAAWARDSGW 251


>gi|319425287|gb|ADV53361.1| methyltransferase small [Shewanella putrefaciens 200]
          Length = 238

 Score = 78.2 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  +ILD+G G+G + L +  +        +++   A    + N   +  + R  
Sbjct: 29  WAPLTNAKQILDIGAGSGILGL-MAAQRSQANITCIELDDTAAIACQHNIAQSPWASRIR 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +Q            +G FD I+ NPPY E      L           ++    D LS  
Sbjct: 88  LVQGSIQQLSQAEEYQGYFDHIICNPPYFEHGPQAQLSQ--------RAMARHTDQLSF- 138

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             +   + + L+ +GL S+ +      +   +    +L  V 
Sbjct: 139 NELLAAIEQCLSPNGLASLILPIQSLHNFNHLLSQSRLEWVE 180


>gi|332363469|gb|EGJ41252.1| methyltransferase [Streptococcus sanguinis SK355]
          Length = 248

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +  +       D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGQYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++ KL
Sbjct: 180 DILDTMQAHKL 190


>gi|315656848|ref|ZP_07909735.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492803|gb|EFU82407.1| 16S rRNA methyltransferase [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 213

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 68/167 (40%), Gaps = 33/167 (19%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F+++
Sbjct: 74  VDVGCGWGPLALTLAAERPSAQVYAVDVNARALELTRANATANGLHNIQVLSEADAFAAL 133

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                DVI SNPP             VR    +++L            + +     L  +
Sbjct: 134 GPNSVDVIWSNPP-------------VRVG--KMAL----------HAMWEAWRTRLKPE 168

Query: 221 GLCSVEIGYNQKVD-VVRIFESRKL--FLVNAFKDYGGNDRVLLFCR 264
           G+  + +G N   D  +            + + K   G  RVL   R
Sbjct: 169 GVAYLVMGRNLGSDPFLAYLNEHGWIGEKIASSK---GF-RVLQLRR 211


>gi|313664901|ref|YP_004046772.1| methyltransferase small domain protein [Mycoplasma leachii PG50]
 gi|312949410|gb|ADR24006.1| methyltransferase small domain protein [Mycoplasma leachii PG50]
          Length = 240

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 20/171 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      +  +   +I D GT    + L +L +    K +GV+I  KA+EIAK N  
Sbjct: 27  DSVLVARFCNLNSKK-KKICDFGTNNAVIPL-ILSKYTRAKIIGVEIQHKAVEIAKQNIK 84

Query: 143 TNGVSERFDTLQSDW--FSSVEGL-FDVIVSNPPYIE---SVIVDCLGLEVRD--FDPRI 194
            N + E+ + + +D   FS +    FD++V NPP+ +   +  +  + LEV +   +  I
Sbjct: 85  LNNLEEQIEIVHTDIKEFSKLHNQEFDLVVCNPPFFKMNGNPKLKEISLEVANARHELLI 144

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +L            I    SR L   G  ++     +  +++ +F    ++
Sbjct: 145 TL----------EDIIKSASRCLKNGGNFTIVHRSERLSEIINLFYKYNIY 185


>gi|110800155|ref|YP_694735.1| hypothetical protein CPF_0275 [Clostridium perfringens ATCC 13124]
 gi|110674802|gb|ABG83789.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
          Length = 249

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 33  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      + +   FDV+  NPPY            + + + ++++ 
Sbjct: 91  KINNIEDKVSFVCGDLKDKELNKLMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 144

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 145 RHEI-MCNLEDVIAVSRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 196


>gi|295695862|ref|YP_003589100.1| ribosomal protein L11 methyltransferase [Bacillus tusciae DSM 2912]
 gi|295411464|gb|ADG05956.1| ribosomal protein L11 methyltransferase [Bacillus tusciae DSM 2912]
          Length = 348

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 42/198 (21%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   V + +          T       L + L  +      R+LD+G G+G + ++    
Sbjct: 175 ELGEVVVRIDPGV-AFGTGTHETTRLCLGWLLDEVT--PGCRVLDVGCGSGILSVS-AAA 230

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               + + VD+   A++ A+ N    GV++R +  + D    +E   D+IV+N       
Sbjct: 231 LGAGRVLAVDLDSLAVDAARHNVEVAGVADRVEVRRGDLLDGIEERGDLIVAN------- 283

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL-----CSVEIGYNQKV 233
                          ++             +   V R L  +G        VE    Q+ 
Sbjct: 284 --------------LLA--------DLVERLLPDVPRCLTAEGRFLASGILVE----QED 317

Query: 234 DVVRIFESRKLFLVNAFK 251
            V R  E+  L +    +
Sbjct: 318 RVARAMEAAGLAVREIRR 335


>gi|325295295|ref|YP_004281809.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065743|gb|ADY73750.1| methyltransferase small [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 249

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
                D F    +T LL D          + +   +I+DLGTG G + + LLK+ P  K 
Sbjct: 20  FIQRKDGFRFGTDTFLLADFV--------KVKGTEKIIDLGTGCGVIPILLLKKYPQLKA 71

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
             +D+  + + I+K N   NGVSERF  L  +          G FD++++NPP+IE    
Sbjct: 72  FAIDVLEENINISKKNGEINGVSERFTALHLNVKEVKKVFKSGEFDIVITNPPFIEVGRG 131

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +    + R    R  L      L          S  L   G   + +   + VDV  IF 
Sbjct: 132 NLSQKDHRAI-ARQELTA---SLED---FIKAASYLLKNKGKLYILLPVQRFVDV--IFL 182

Query: 241 SRKLF 245
           +RK  
Sbjct: 183 TRKYK 187


>gi|300725760|ref|ZP_07059230.1| methyltransferase small domain protein [Prevotella bryantii B14]
 gi|299776933|gb|EFI73473.1| methyltransferase small domain protein [Prevotella bryantii B14]
          Length = 247

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 17/158 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+GTGTG + L L +  P  +   ++I   A+  AK N   +  ++R       +   
Sbjct: 47  ILDIGTGTGVLSLMLAQRFPNAQIQAIEIDENAVLDAKDNFFASPFADRIKLEHIAFQDY 106

Query: 161 VEG------LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++       ++D +V NPPY +     + L          +           +  +  G 
Sbjct: 107 IKEVKDTMPIYDSVVCNPPYFDKSLECNNLSKTRARHSSSL----------PFSILIKGA 156

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            + L   G  SV I      D           L + +K
Sbjct: 157 YQLLKPGGFFSVCIPKEVLEDFSAECTIVGFSLQDIYK 194


>gi|228472752|ref|ZP_04057510.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624]
 gi|228275803|gb|EEK14569.1| methyltransferase small [Capnocytophaga gingivalis ATCC 33624]
          Length = 237

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 28/186 (15%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+GTGTG + L + +  P      V++   + +  + N   +   +  +
Sbjct: 31  WTPAINPNYILDIGTGTGVLSLMMAQRFPLSHIHAVELHPLSAKECRLNVSLSPWHQAVE 90

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVR------DFDPRISLDGGIDG 202
             + D           +D+I+SNPP+     +      VR      ++ P          
Sbjct: 91  VFEMDIRDFASTSATAYDLIISNPPFFSENTLS--PDRVRAMARSNEYLPFS-------- 140

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG----NDR 258
                 +   +   L   G  SV I Y ++   ++I     LF        G       R
Sbjct: 141 -----DLLSCIPLLLAPQGFFSVIIPYREEESFLQIAMENGLFPTQILHVQGNSLSPIKR 195

Query: 259 VLLFCR 264
            LL  R
Sbjct: 196 SLLLLR 201


>gi|282855154|ref|ZP_06264486.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|295131338|ref|YP_003582001.1| methyltransferase small domain protein [Propionibacterium acnes
           SK137]
 gi|282581742|gb|EFB87127.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|291376428|gb|ADE00283.1| methyltransferase small domain protein [Propionibacterium acnes
           SK137]
 gi|313773225|gb|EFS39191.1| methyltransferase small domain protein [Propionibacterium acnes
           HL074PA1]
 gi|313810418|gb|EFS48132.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA1]
 gi|313812248|gb|EFS49962.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA1]
 gi|313830086|gb|EFS67800.1| methyltransferase small domain protein [Propionibacterium acnes
           HL007PA1]
 gi|313832642|gb|EFS70356.1| methyltransferase small domain protein [Propionibacterium acnes
           HL056PA1]
 gi|314924130|gb|EFS87961.1| methyltransferase small domain protein [Propionibacterium acnes
           HL001PA1]
 gi|314964971|gb|EFT09070.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA2]
 gi|314973065|gb|EFT17161.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA1]
 gi|314975561|gb|EFT19656.1| methyltransferase small domain protein [Propionibacterium acnes
           HL045PA1]
 gi|314982234|gb|EFT26327.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA3]
 gi|314984845|gb|EFT28937.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA1]
 gi|315079904|gb|EFT51880.1| methyltransferase small domain protein [Propionibacterium acnes
           HL078PA1]
 gi|315090494|gb|EFT62470.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA4]
 gi|315093730|gb|EFT65706.1| methyltransferase small domain protein [Propionibacterium acnes
           HL060PA1]
 gi|315096708|gb|EFT68684.1| methyltransferase small domain protein [Propionibacterium acnes
           HL038PA1]
 gi|327325249|gb|EGE67054.1| putative methyltransferase small domain protein [Propionibacterium
           acnes HL096PA2]
 gi|327325549|gb|EGE67348.1| putative methyltransferase small domain protein [Propionibacterium
           acnes HL103PA1]
 gi|327444050|gb|EGE90704.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA1]
 gi|327449449|gb|EGE96103.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA2]
 gi|328761334|gb|EGF74861.1| putative methyltransferase small domain protein [Propionibacterium
           acnes HL099PA1]
          Length = 206

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +       V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSNPP--------IRVGKAALHEILTTWLA---------RLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|138896075|ref|YP_001126528.1| ribosomal protein L11 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|166223415|sp|A4IR29|PRMA_GEOTN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|134267588|gb|ABO67783.1| Ribosomal protein L11 methyltransferase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 312

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 56/223 (25%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+  Y+         +  + +T+EP    EL+++     +            L  +EK
Sbjct: 112 TAWKKHYHPVKVSEKFTIVPTWETYEPASNDELIIEMDPGMAFGTGTHPTTVMCLQALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 172 YVHPGDNVIDVGTGSGILSIAAAMLGAHS-VRALDLDPVAIDSARLNVKLNKVQHVVTVA 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    ++   DVIV+N                      ++                  
Sbjct: 231 QNNLLDHIDEQADVIVAN---------------------ILA--------EIILRFTADA 261

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLF--LVNAFKD 252
            R L   G      G  Q    DV     +   F   VN  +D
Sbjct: 262 YRLLKPGGRFIT-SGIIQAKKQDVKDGLLAAGFFIEEVNVMED 303


>gi|187775821|ref|ZP_02992727.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196]
 gi|208807959|ref|ZP_03250296.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206]
 gi|187770611|gb|EDU34455.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4196]
 gi|208727760|gb|EDZ77361.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4206]
 gi|326340381|gb|EGD64185.1| putative methyltransferase [Escherichia coli O157:H7 str. 1125]
          Length = 257

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER 
Sbjct: 51  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERI 110

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 111 NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 161 QTLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 219

Query: 262 F 262
            
Sbjct: 220 A 220


>gi|257056435|ref|YP_003134267.1| methyltransferase family protein [Saccharomonospora viridis DSM
           43017]
 gi|256586307|gb|ACU97440.1| methyltransferase family protein [Saccharomonospora viridis DSM
           43017]
          Length = 498

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L V  A    +    +R V  +LDLGTG G   L   K +   +    D S +AL 
Sbjct: 137 PDHVLGVGHASLSLVRATSRRPVESVLDLGTGNGVQALHASKYAQ--RITATDTSARALR 194

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A++    N +    + LQ DWF+ V    FD IV NPP++  V    +    R      
Sbjct: 195 LAQATFALNELD--VELLQGDWFAPVARRRFDRIVCNPPFV--VGPPRVDYVYR------ 244

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDG 221
             D G+ G      +   +   L ++G
Sbjct: 245 --DSGLAGDDASALLVRQLPGFLTENG 269


>gi|119775680|ref|YP_928420.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis
           SB2B]
 gi|229470399|sp|A1S8P4|RLMG_SHEAM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|119768180|gb|ABM00751.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B]
          Length = 383

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 29/166 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + +++T  S+ F         +D      +  + +     ++DLG G G + L   +  P
Sbjct: 207 HGLKVTNLSNVFAASK-----LDIGARLMMANLPQGHFSSVIDLGCGNGVLALKAAQTYP 261

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG--LFDVIVSNPPYIES 177
             +   VD S  A+E A+ N   N + E R + +  D  S +      D+++ NPP+ + 
Sbjct: 262 DARLYLVDESAMAVESARQNWALNALDEGRAEFIWDDCLSHLPNEVQADLVLCNPPFHQG 321

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             +             I+             + +   R L   GL 
Sbjct: 322 EAITD----------HIAW-----------QMFNDAKRALKPGGLL 346


>gi|310659095|ref|YP_003936816.1| ribosomal protein l11 methyltransferase [Clostridium sticklandii
           DSM 519]
 gi|308825873|emb|CBH21911.1| Ribosomal protein L11 methyltransferase [Clostridium sticklandii]
          Length = 312

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 36/201 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETE-----LLV-------------DSALAFSLPRIEKR-- 96
           W+ +Y           +P  E        LV                    +  +E+   
Sbjct: 115 WKQYYKPVKVSDKIVIKPTWEEYNAKLNELVIELDPGMAFGTGTHETTNMCIQALERHID 174

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD+G G+G + +A  K     + +GVD+   A++++K N   N +    +    +
Sbjct: 175 SNCSVLDIGCGSGILSIAAAKLGAD-RVLGVDLDPVAVKVSKENIEQNNLLGFVEIRHGN 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA----DG 212
               V    D++V+N   I + IV  L  EV ++          DGL     I     + 
Sbjct: 234 LMDVVTEKADIVVAN---IIADIVIKLADEVANYM-------KEDGLFISSGIIMPRLEE 283

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
           V + +   G   +E+   Q  
Sbjct: 284 VKKAIEDKGFKILEVN-TQGE 303


>gi|182626807|ref|ZP_02954545.1| SAM-dependent methyltransferase [Clostridium perfringens D str.
           JGS1721]
 gi|177907853|gb|EDT70451.1| SAM-dependent methyltransferase [Clostridium perfringens D str.
           JGS1721]
          Length = 256

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      S     FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIEDKVSFVYGDLKDKELSKSMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|120600079|ref|YP_964653.1| type 12 methyltransferase [Shewanella sp. W3-18-1]
 gi|262828731|sp|A1RN54|TRMN6_SHESW RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|120560172|gb|ABM26099.1| Methyltransferase type 12 [Shewanella sp. W3-18-1]
          Length = 238

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  +ILD+G G+G + L +  +        +++   A    + N   +  + R  
Sbjct: 29  WAPLTNAKQILDIGAGSGILGL-MAAQRSQANITCIELDDTAAIACQHNIAQSPWASRIR 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +Q            +G FD I+ NPPY E      L           ++    D LS  
Sbjct: 88  LVQGSIQQLSQAEEYQGYFDHIICNPPYFEHGPQAQLSQ--------RAMARHTDQLSF- 138

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             +   + + L+ +GL S+ +      +   +    +L  V 
Sbjct: 139 NELLAAIEQCLSPNGLASLILPIQSLHNFNHLLSQSRLEWVE 180


>gi|296535666|ref|ZP_06897842.1| N-6 adenine-specific DNA methylase [Roseomonas cervicalis ATCC
           49957]
 gi|296264017|gb|EFH10466.1| N-6 adenine-specific DNA methylase [Roseomonas cervicalis ATCC
           49957]
          Length = 250

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +PR      +D+        I  R    +L+ G G+GAV L LL   P  + V ++   +
Sbjct: 23  QPRQGLRAGLDAV--MLAAAIPARPGETVLEGGCGSGAVFLCLLARVPGLRVVAIERDPE 80

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVR 188
              +A+ NA  NG +   + L+ D             D   +NPPY              
Sbjct: 81  LAALARENAARNGHAGAVEVLEGDIADPALRRAWPRCDHAFANPPYWPEGSA-------- 132

Query: 189 DFDPRISLDGGI 200
              P ++L  G 
Sbjct: 133 ---PPVALRAGA 141


>gi|270292436|ref|ZP_06198647.1| methyltransferase [Streptococcus sp. M143]
 gi|270278415|gb|EFA24261.1| methyltransferase [Streptococcus sp. M143]
          Length = 248

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  KR +  I+D   G GAV L        
Sbjct: 19  DIKIIQNKEVFSYS------VDSVLLSRFPRFPKRGL--IVDFCAGNGAVGL-FASSRTQ 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 70  ARIISVEIQERLADMAERSVQLNGLEEQMRVICDDLKNMPAHIQGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +             I       L  +G  ++    ++ +
Sbjct: 130 DPHSNLNESEHYLLARHEIATN----------IEEICRSAQSILKSNGRLAMVHRPDRLL 179

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 180 DILDMLQRHNL 190


>gi|50365489|ref|YP_053914.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
           [Mesoplasma florum L1]
 gi|50364045|gb|AAT76030.1| S-adenosylmethionine:2-demethylmenaquinone methyltransferase
           [Mesoplasma florum L1]
          Length = 240

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 19/158 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K  + +I+D GT    + L ++ +    K VGV+I  KA E+A  N   N ++E+ + + 
Sbjct: 38  KSSIKKIVDFGTNNAVIPL-IVSKYTNAKIVGVEIQTKAAELAIENIELNKLTEQVEIVN 96

Query: 155 SD---WFSSVEGLFDVIVSNPPYIESVI---VDCLGLEVRD--FDPRISLDGGIDGLSHY 206
           SD   +   +   FD ++ NPP+ +      V  +  EV +   +  I+L          
Sbjct: 97  SDIKTYAKEMANKFDAVICNPPFFKKHEESKVKKISEEVVNARHETLITL---------- 146

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             I       L   G  ++     +  +++ +    K 
Sbjct: 147 EEIIKNAGLILKNGGSFTLVHRPERIGEIINLMYKYKF 184


>gi|311278492|ref|YP_003940723.1| methyltransferase small [Enterobacter cloacae SCF1]
 gi|308747687|gb|ADO47439.1| methyltransferase small [Enterobacter cloacae SCF1]
          Length = 245

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+GTG+G + L L + +        V++   A   A  N   +  ++R 
Sbjct: 39  WAPIARVNRILDIGTGSGLLALMLAQRTEASVTLDAVELDVDAAAQAAENVQESPWAQRI 98

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D    + G    +D+IVSNPPY E          E   +            L H 
Sbjct: 99  AVHQADVRDWIAGQNSRYDLIVSNPPYYEQGVECATPQREQARY---------TTSLDHT 149

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
             +    +  + ++G   V +  N          +    L
Sbjct: 150 -ALLACAADAITEEGFFCVVLPENIGNSFTEQALAMGWHL 188


>gi|319937658|ref|ZP_08012061.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
 gi|319807093|gb|EFW03707.1| 16S rRNA m(2)G 1207 methyltransferase [Coprobacillus sp. 29_1]
          Length = 201

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 66/188 (35%), Gaps = 37/188 (19%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLG 105
                            +LT  SD      E    VD      L  ++ +   R +LD+G
Sbjct: 16  TRIPFQY-------RKHQLTFISDIGVFSKER---VDYGSRVLLDCMDIQANQRSLLDVG 65

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G G + ++L KE P+     VD++ +A+ +A  +   N V +      S  + +V G F
Sbjct: 66  CGYGTLGVSLKKEYPWLHVEMVDVNERAVHLANQSCQYNDVED-IKAYLSFAYENVVGTF 124

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           DVIVSNPP                            G      I +     LN++G   V
Sbjct: 125 DVIVSNPPIRA-------------------------GKKVVFEILEKAFDFLNENGELIV 159

Query: 226 EIGYNQKV 233
            I   Q  
Sbjct: 160 VIQKKQGA 167


>gi|238899304|ref|YP_002924987.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259495487|sp|C4K8X0|RSMC_HAMD5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|229467065|gb|ACQ68839.1| 16S RNA m2G1207 methylase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 336

 Score = 77.8 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR +   +V++      F     +   +D      L   +     ++LDL  G G +   
Sbjct: 159 WRRYQVKDVQIKTLPGVF-----SANQLDEGSQLLLSSFDIPLSGKVLDLACGAGVLGTI 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L ++SP  +    D++  ALE +++N   N +  R   + SD +S +   F++I+SN P+
Sbjct: 214 LARQSPQIELTLSDVNAAALESSRANLAVNHIKARV--VPSDLYSDIPERFNLILSNLPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            + +  D                             +    HL K G  
Sbjct: 272 HKGLKTDI---------------------KMIEKCIEEAPGHLYKGGKL 299


>gi|154482642|ref|ZP_02025090.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC
           27560]
 gi|149736542|gb|EDM52428.1| hypothetical protein EUBVEN_00309 [Eubacterium ventriosum ATCC
           27560]
          Length = 214

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 69/168 (41%), Gaps = 19/168 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     ++ K +  R LDLGTGTG + + L  ++       ++I  ++ E+A+ + 
Sbjct: 1   MDAVLLTGFAKVGKGE--RALDLGTGTGIIPILLEAKTEGQDFEALEIQPESAEMARRSV 58

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRI 194
           + N + +R   +  D   + +      F+V+ +NPPY+          E   +   + + 
Sbjct: 59  MLNNLQDRIKIVDGDIKEASKIFGAASFNVVTTNPPYMTENHGVKNPDEPKAIARHEIKC 118

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +L            +    ++ L   G   +     +  +++ + +  
Sbjct: 119 NL----------EDVIRESAKLLKPKGRFYMVHRPRRLAEIISLMKEY 156


>gi|262527564|sp|P44702|TRMN6_HAEIN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 232

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLTQVDIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     + +
Sbjct: 141 --WLEWAATRLSENGRISFVLPYEAGKTLTK 169


>gi|262283176|ref|ZP_06060943.1| DNA methyltransferase signature protein [Streptococcus sp.
           2_1_36FAA]
 gi|262261428|gb|EEY80127.1| DNA methyltransferase signature protein [Streptococcus sp.
           2_1_36FAA]
          Length = 248

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P++ K  +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPKLPKSGL--IVDLCAGNGAVGL-FASAHTQ 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N + ++   +  D  +          D+I  NPPY + 
Sbjct: 70  AKIIAVEIQERLADMAQRSIQLNQLDQQMQVIHDDLKNLPHYIPCSKVDMIFCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++    ++ +
Sbjct: 130 DKHSNLNESEHYLLARHEISTNL----------EEICTVAQRVLKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMKAHNL 190


>gi|168218269|ref|ZP_02643894.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182379728|gb|EDT77207.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 256

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      +     FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIQDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|92114677|ref|YP_574605.1| rRNA (guanine-N(2)-)-methyltransferase [Chromohalobacter salexigens
           DSM 3043]
 gi|122419455|sp|Q1QUF2|RSMC_CHRSD RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91797767|gb|ABE59906.1| 16S rRNA m(2)G 1207 methyltransferase [Chromohalobacter salexigens
           DSM 3043]
          Length = 333

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 58/174 (33%), Gaps = 34/174 (19%)

Query: 57  WRDF--YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           W  F    + L      F   +    T  L++  L  +L         R+LD+G G G +
Sbjct: 151 WTRFEAAGLTLESHPGVFGHGKLDDGTRQLLE-VLPTALG---DPAGQRVLDVGCGDGIL 206

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              L       +   VD+   A+   +     NGV+   +  QSD F  V G +D IVSN
Sbjct: 207 GAWLGVR--GAQVAAVDLDAFAVAATRRTFQANGVAG--EAWQSDVFGDVSGSYDAIVSN 262

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+ +   +D    E                      +       L   G   +
Sbjct: 263 PPFHQQRAIDYGPAE---------------------RLIREAPARLVPGGRLVL 295


>gi|20807438|ref|NP_622609.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           tengcongensis MB4]
 gi|38605369|sp|Q8RB66|PRMA_THETN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|20515962|gb|AAM24213.1| Ribosomal protein L11 methylase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 309

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 25/154 (16%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   +V                    L  +E   +
Sbjct: 113 WKKYYKPLKVGKRIVVRPLWEEYSPKEGEIVIDLDPGMAFGTGTHETTKMCLQFLEDIVK 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G G+G + +A   +       G D+   A++IA+ N   NG+ E  +  QSD
Sbjct: 173 PGAIVFDVGCGSGILSIA-ASKLGASYVYGADVDEMAVKIARENVKLNGL-ENVEIFQSD 230

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              +  G  DVIV+N   I +  +  L  +V   
Sbjct: 231 LLKNFRGKADVIVAN---IIADAIIRLIPDVLPH 261


>gi|16272371|ref|NP_438584.1| hypothetical protein HI0423 [Haemophilus influenzae Rd KW20]
 gi|260580514|ref|ZP_05848342.1| O-methyltransferase [Haemophilus influenzae RdAW]
 gi|1573395|gb|AAC22079.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092856|gb|EEW76791.1| O-methyltransferase [Haemophilus influenzae RdAW]
          Length = 240

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 38  WADVKHCKNILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 97

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLTQVDIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     + +
Sbjct: 149 --WLEWAATRLSENGRISFVLPYEAGKTLTK 177


>gi|323356746|ref|YP_004223142.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
 gi|323273117|dbj|BAJ73262.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
          Length = 214

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 22/194 (11%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKES 119
            ++ +  +   F P       VD+  +  L            LDLG G G + L+L   S
Sbjct: 27  RDLEVVTAGGVFSPDH-----VDAGTSVLLANTPPPPAGGHFLDLGCGWGPISLSLALSS 81

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P      VD++ +AL++ + NA + G++        D    +   F  I SNPP    V 
Sbjct: 82  PHATVWAVDVNERALDLVRRNAESLGLTNVNAVRPEDVPDDIA--FRTIRSNPPI--RVG 137

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIA--DGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              L   +  + PR  L    DG    +     D + R L           +     V R
Sbjct: 138 KSELHGMLEHWIPR--LSERSDGWFVVQRNLGSDSLQRWLAA--------SFTPGYSVHR 187

Query: 238 IFESRKLFLVNAFK 251
               R   ++   +
Sbjct: 188 AATGRGFRVLRVRR 201


>gi|322834524|ref|YP_004214551.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
 gi|321169725|gb|ADW75424.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
          Length = 348

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 31/171 (18%)

Query: 56  GWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           GW D Y    V +      F     +   +DS     +   E+    ++LD+  G G + 
Sbjct: 157 GWWDQYMVEEVTIKTLPGVF-----SREGLDSGSLLLINSFEEPVKGKVLDVACGAGVLA 211

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             L   SP  K    D+S  A+E +++    N +    + + S+ +S + G FD+I+SNP
Sbjct: 212 SVLAMYSPKMKITLSDVSAAAIEASRATLAANDLPG--EVIASNVYSDIAGRFDMIISNP 269

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           P+                +      G    L+    +  G   HLN  G  
Sbjct: 270 PF---------------HE------GLQTSLTAAEQLIRGAVSHLNIGGEL 299


>gi|15803102|ref|NP_289133.1| putative enzyme [Escherichia coli O157:H7 EDL933]
 gi|15832695|ref|NP_311468.1| hypothetical protein ECs3441 [Escherichia coli O157:H7 str. Sakai]
 gi|291283851|ref|YP_003500669.1| hypothetical protein G2583_3157 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12516996|gb|AAG57691.1|AE005488_2 putative enzyme [Escherichia coli O157:H7 str. EDL933]
 gi|13362912|dbj|BAB36864.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
 gi|209762798|gb|ACI79711.1| putative enzyme [Escherichia coli]
 gi|209762800|gb|ACI79712.1| putative enzyme [Escherichia coli]
 gi|209762804|gb|ACI79714.1| putative enzyme [Escherichia coli]
 gi|290763724|gb|ADD57685.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615]
          Length = 285

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 139 NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 QTLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|311029039|ref|ZP_07707129.1| hypothetical protein Bm3-1_00509 [Bacillus sp. m3-13]
          Length = 96

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E     RILD+G G G + L+L K  P      +D++ +A+E+AK N   N V E     
Sbjct: 8   EPEVEGRILDVGCGYGPIGLSLAKFYPHRHVDMIDVNERAVELAKENGSINKV-ENITVF 66

Query: 154 QSDWFSSVEGL-FDVIVSNPP 173
            SD + +V    +  I+SNPP
Sbjct: 67  TSDIYENVTSTDYAAILSNPP 87


>gi|18309261|ref|NP_561195.1| hypothetical protein CPE0279 [Clostridium perfringens str. 13]
 gi|168207833|ref|ZP_02633838.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
 gi|18143937|dbj|BAB79985.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|170660846|gb|EDT13529.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
          Length = 256

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      S     FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|209762802|gb|ACI79713.1| putative enzyme [Escherichia coli]
 gi|209762806|gb|ACI79715.1| putative enzyme [Escherichia coli]
          Length = 285

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 139 NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 QTLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|168765032|ref|ZP_02790039.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501]
 gi|168790376|ref|ZP_02815383.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869]
 gi|217327142|ref|ZP_03443225.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588]
 gi|261222989|ref|ZP_05937270.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259461|ref|ZP_05951994.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|262831357|sp|Q8XA22|TRMN6_ECO57 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|189365091|gb|EDU83507.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4501]
 gi|189370140|gb|EDU88556.1| putative methyltransferase [Escherichia coli O157:H7 str. EC869]
 gi|217319509|gb|EEC27934.1| putative methyltransferase [Escherichia coli O157:H7 str. TW14588]
 gi|320188916|gb|EFW63575.1| putative methyltransferase [Escherichia coli O157:H7 str. EC1212]
 gi|320640824|gb|EFX10318.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320646170|gb|EFX15110.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320651465|gb|EFX19861.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H- str. H 2687]
 gi|320657067|gb|EFX24886.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli O55:H7 str. 3256-97 TW 07815]
 gi|320662732|gb|EFX30071.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667552|gb|EFX34472.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326345064|gb|EGD68808.1| putative methyltransferase [Escherichia coli O157:H7 str. 1044]
          Length = 245

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 99  NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 QTLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|182418466|ref|ZP_02949760.1| ribosomal protein L11 methyltransferase [Clostridium butyricum
           5521]
 gi|237666515|ref|ZP_04526500.1| ribosomal protein L11 methyltransferase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377848|gb|EDT75392.1| ribosomal protein L11 methyltransferase [Clostridium butyricum
           5521]
 gi|237657714|gb|EEP55269.1| ribosomal protein L11 methyltransferase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 314

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 16/139 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                + D+G G+G + +A  K       VGVD+   A++ AK N   N + +  + L+ 
Sbjct: 176 EPDTTVFDVGCGSGILAIAGAKLGAK-HVVGVDLDPVAVDSAKENVGFNNL-DNIEILEG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--- 212
           +    VEG  D++V+N   I + I+  L  +V+      +L+ G  GL     I      
Sbjct: 234 NLLDVVEGKADIVVAN---IIAEIICILTADVKK-----ALNEG--GLFITSGIIHDRVE 283

Query: 213 -VSRHLNKDGLCSVEIGYN 230
            V+  L + G   +EI  +
Sbjct: 284 MVTDKLKECGFEVMEINKD 302


>gi|145640384|ref|ZP_01795968.1| predicted O-methyltransferase [Haemophilus influenzae R3021]
 gi|145274970|gb|EDK14832.1| predicted O-methyltransferase [Haemophilus influenzae 22.4-21]
          Length = 232

 Score = 77.8 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQDNINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D        E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLIQTDIQHFLQPTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y+    + +
Sbjct: 141 --WLEWAATRLSENGRISFVLPYDAGKTLTK 169


>gi|227328588|ref|ZP_03832612.1| hypothetical protein PcarcW_15134 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 248

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 15/159 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R 
Sbjct: 42  WTPVSSATRILDIGSGSGLLALMLAQRSEPRVQIDAVELDRAASDQAKENVAASPWADRI 101

Query: 151 DTLQSDWFSSVEGL---FDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
                D  S  E     + +I+SNPPY    I    +  +   +            L  +
Sbjct: 102 TVYAEDIVSFAETRAADYSLIISNPPYFPPGIACGSVQRDQARY----------TTLLTH 151

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +     + L  +GL  V +        + + +    +
Sbjct: 152 EALLRCAHQLLMPEGLFCVVLPVQVAEHFIPLAQQNHWY 190


>gi|168748353|ref|ZP_02773375.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113]
 gi|168757761|ref|ZP_02782768.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401]
 gi|168768680|ref|ZP_02793687.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486]
 gi|168778554|ref|ZP_02803561.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076]
 gi|168801695|ref|ZP_02826702.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508]
 gi|195936723|ref|ZP_03082105.1| hypothetical protein EscherichcoliO157_09715 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208812457|ref|ZP_03253786.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208821308|ref|ZP_03261628.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209400058|ref|YP_002272050.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115]
 gi|254794526|ref|YP_003079363.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
 gi|262827974|sp|B5Z149|TRMN6_ECO5E RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828092|sp|C6UQY1|TRMN6_ECO5T RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|188017117|gb|EDU55239.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4113]
 gi|189003446|gb|EDU72432.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4076]
 gi|189355296|gb|EDU73715.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4401]
 gi|189362238|gb|EDU80657.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4486]
 gi|189376185|gb|EDU94601.1| putative methyltransferase [Escherichia coli O157:H7 str. EC508]
 gi|208733734|gb|EDZ82421.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4045]
 gi|208741431|gb|EDZ89113.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4042]
 gi|209161458|gb|ACI38891.1| putative methyltransferase [Escherichia coli O157:H7 str. EC4115]
 gi|254593926|gb|ACT73287.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O157:H7 str. TW14359]
          Length = 245

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +   ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAATQAQENVAQSPWLERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY E          E   +            L H 
Sbjct: 99  NVHTADIQQWVTQQTARFDLIISNPPYYEQGVECATPQREQARY---------TTSLDH- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +T+    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 QTLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|222480516|ref|YP_002566753.1| methylase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453418|gb|ACM57683.1| methylase [Halorubrum lacusprofundi ATCC 49239]
          Length = 199

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 31/193 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G  +   +   +    ++P  ++                +    R+L++GTG+G V   +
Sbjct: 11  GLAERRGLDEAV---VYQPAEDSG--------LLAEAALEEAHGRVLEVGTGSGWVAQQI 59

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +E      VG D++  A   A+      GV      L S + +     FD +  NPPY+
Sbjct: 60  AEER-GLDTVGSDLNPHAARQARE----RGVEGVVADLLSPYRADA---FDTVCFNPPYL 111

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYNQ 231
            +   D    +  +     +L GG  G        D V R L   G+  + +    GY+ 
Sbjct: 112 PT-DPDNEWGDWMEH----ALSGGESGRELIEPFLDDVGRVLAPGGVVLLLVSSLTGYD- 165

Query: 232 KVDVVRIFESRKL 244
             +V+ + E    
Sbjct: 166 --EVLALVEDAGF 176


>gi|257126774|ref|YP_003164888.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
 gi|257050713|gb|ACV39897.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
          Length = 209

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 36/177 (20%)

Query: 83  DSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D  L   L   + +   +  +LD+G G G V + +       K +  D++ +ALE+ K N
Sbjct: 46  DVMLKVFLRENQNKKNQKFDVLDIGCGYGVVSVIIKSFFENTKIISSDVNERALELTKEN 105

Query: 141 AVTNGV----SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            + N      +E F+  +S  F ++   FDVI+SNPP                       
Sbjct: 106 LLKNNAIKNENEEFEIRKSFAFDNISEKFDVILSNPPIRAGKQT---------------- 149

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIFESRKLFLVN 248
                       I +  S HLN +G     I            +  IF + +   +N
Sbjct: 150 ---------IFQIYEKSSEHLNSNGEFYCVIQTKHGAKSTQKKLEEIFRNCETLEIN 197


>gi|332304707|ref|YP_004432558.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172036|gb|AEE21290.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 248

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 15/164 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDT---- 152
             + LD+GTG+G + + L ++SP      G+DI   A+  AK N   +  SE+ D     
Sbjct: 44  PQQFLDIGTGSGLLAIMLAQKSPAHTCITGIDIDSDAIGQAKRNMANSPWSEKLDAQQTS 103

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--LDGGIDGLSHYRTIA 210
           LQS     V+  + +I+SNPPY  S I+       +    R +  L         ++++ 
Sbjct: 104 LQSFHKREVDQKYRLIISNPPYFNSPILSEEKHTQKRVQARQTSELT--------HQSLL 155

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           + V++ L  +G+    +  +     +    +  L L+     Y 
Sbjct: 156 NNVAQLLADNGMFYCVLPSDVCEAFIEYANTIGLQLIKQLTVYS 199


>gi|312881561|ref|ZP_07741342.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370764|gb|EFP98235.1| 16S RNA G1207 methylase RsmC [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 38/212 (17%)

Query: 50  SIHR--ILGW-RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLG 105
            I      GW    +++ L    + +     +   +D    F L  +  +  +  ++DLG
Sbjct: 185 PIEYRDYTGWNVPEHDIYLDNLPNVY-----SGESLDIGARFMLEHLPVETKIKHVIDLG 239

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL 164
            G G + + + + +P  K   VD S  A+  AK N   N   E   D + ++    +   
Sbjct: 240 CGNGVLAIKMARLNPGIKLTCVDESFMAIASAKRNLAQNLTEEHDIDLIANNCLDDLNIK 299

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             DVI+ NPP+ +   +             I+             +     + L   G  
Sbjct: 300 NVDVILCNPPFHQQQTITD----------HIAW-----------QMFCDAKQILKPGGQL 338

Query: 224 SVE----IGYNQKVDVVRIFESRKLFLVNAFK 251
            V     +GY+    + R+F  R + +V + K
Sbjct: 339 LVIGNRHLGYD--GKLSRLFGKRNVSVVASNK 368


>gi|170740785|ref|YP_001769440.1| methyltransferase small [Methylobacterium sp. 4-46]
 gi|168195059|gb|ACA17006.1| methyltransferase small [Methylobacterium sp. 4-46]
          Length = 315

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 14/173 (8%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G    ++    L++D+    P+T     + L     R  +R V R +D+G G+GA  + +
Sbjct: 96  GELFLHSAFPPLAADSVFFGPDTVRFAAAVLDHLAAR--ERPVRRAVDIGCGSGAAGILI 153

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K +P  + V VDI+ KAL  A+ NA   GV+       S+  S VEG FD+IVSNPP++
Sbjct: 154 AKRAPGAEVVLVDINEKALRAARLNARAAGVA-NVRARPSNMLSGVEGAFDLIVSNPPFM 212

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
               VD  G   RD        GG  G      +    +  L   G   +  G
Sbjct: 213 ----VDAAGRAYRD-------GGGALGTGLSLAVVRAAAERLAPGGTLVLFTG 254


>gi|28211651|ref|NP_782595.1| ribosomal protein L11 methyltransferase [Clostridium tetani E88]
 gi|38605254|sp|Q892R2|PRMA_CLOTE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|28204093|gb|AAO36532.1| ribosomal protein L11 methyltransferase [Clostridium tetani E88]
          Length = 314

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 13/142 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+GTG+G + +A  K +   K +GVD+   A++ AK N   N + +  + L  
Sbjct: 178 KEEDVVFDIGTGSGILGIAAAKLNAK-KVIGVDLDEVAVDSAKKNVGFNHL-DNIEILHG 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGG-IDGLSHYRTIADGV 213
           D    V+G  ++IV+N   I + I+  L  +V+ F +     DGG        +   + V
Sbjct: 236 DLMEVVKGKCNIIVAN---IIADIIILLSKDVKKFLE-----DGGYFISSGIIKDRKEEV 287

Query: 214 SRHLNKDGLCSVEIGYNQKVDV 235
              L ++G    EI   Q   V
Sbjct: 288 VDSLKENGFKIEEI-KEQGEWV 308


>gi|166033096|ref|ZP_02235925.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC
           27755]
 gi|166027453|gb|EDR46210.1| hypothetical protein DORFOR_02818 [Dorea formicigenerans ATCC
           27755]
          Length = 246

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  ++++ +    LDLGTGTG + + L  ++P     G+++  ++ ++A+ + 
Sbjct: 32  MDAVLLSSYAKVKRGEQA--LDLGTGTGILPILLEAKNPGLHYTGLEVQEESADMARRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             NG+  + D +  D   +        ++VIVSNPPY+          E       +   
Sbjct: 90  AHNGLENKIDIVTGDIKEASHIFGNDSYEVIVSNPPYMIGEHGLKNDNEALYIARHEALC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +LD           +    ++ L   G   +  
Sbjct: 150 TLD----------DLLRESAKVLKMKGRFYMVH 172


>gi|331003128|ref|ZP_08326638.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412959|gb|EGG92336.1| hypothetical protein HMPREF0491_01500 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 248

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++ ++   I+DL TG+G V + L  ++   +  G++I     ++A  + 
Sbjct: 35  IDAVLLANF--VKAKNGGHIIDLCTGSGIVPVLLSAKTSAKRITGIEIQKDIADMANRSV 92

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIV---DCLGLEVRDFDPRI 194
           + N + E+ D +  D  ++++       D I  NPPY++         L L +   +   
Sbjct: 93  LYNSLEEKIDIINDDIANALKYIKPCSVDTISVNPPYMKDTTAIKNPDLPLAIARHE--- 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            L      L+   T+     + L ++G   +     +   +  IF   K   + 
Sbjct: 150 -L------LTDLETVVGISGKLLKENGKFFMIH---KPSRLSEIFAVLKKNRIE 193


>gi|308048606|ref|YP_003912172.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM
           9799]
 gi|307630796|gb|ADN75098.1| rRNA (guanine-N(2)-)-methyltransferase [Ferrimonas balearica DSM
           9799]
          Length = 366

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 23/142 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   D   I+DLG G G + +ALL+ +P    + VD S  A+   + N  
Sbjct: 209 DIGARLLLQHLPSSDG-EIVDLGCGNGVLSMALLQANPDAHILAVDESWDAVRSTEENLA 267

Query: 143 TNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +     RF+ + +D  S ++ G  D +V NPP+ +          V D            
Sbjct: 268 SVADQSRFEVVWNDCLSGMDGGQADWVVCNPPFHQ-------QQAVTDH----------- 309

Query: 202 GLSHYRTIADGVSRHLNKDGLC 223
                  +     R L   G  
Sbjct: 310 ---IAWQMFRDAKRILKMGGRL 328


>gi|213025832|ref|ZP_03340279.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           404ty]
          Length = 61

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 22/52 (42%)

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            I D   + L   G   +E G+ Q   V   F       V   +DYGGN+RV
Sbjct: 3   HIIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRRSGYTDVETCRDYGGNERV 54


>gi|313906141|ref|ZP_07839490.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
 gi|313469028|gb|EFR64381.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
          Length = 246

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +++K +    LDLGTGTG + + L  ++      G++I   + E+A  + 
Sbjct: 31  IDAVLLSGFAKVKKGENA--LDLGTGTGIIPILLAAKTEGRSFTGLEIQHSSAEMAARSI 88

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + +R   ++ D   +        FDV+VSNPPY+           + + D  +++ 
Sbjct: 89  AVNHLEDRISIVEGDIKEAASLFGPASFDVVVSNPPYMIG------QHGIANPDQSLAIA 142

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                L  +R I +  ++ L   G   +  
Sbjct: 143 RHEV-LCSFREIVEQTAKILTSRGRFYLIH 171


>gi|302553085|ref|ZP_07305427.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470703|gb|EFL33796.1| rRNA or tRNA methyltransferase [Streptomyces viridochromogenes DSM
           40736]
          Length = 512

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G   L   + +   +    D++ +AL I       +G     D  +
Sbjct: 169 RRPVAAALDLGTGSGVQALHAARHA--TRVTATDLNPRALHITALTLALSGSPA-ADLRE 225

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  V  +  +D+IVSNPP++ S                   DGG+ G    RT+   
Sbjct: 226 GSLFDPVRDDETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVSE 274

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               LN+ G       +    
Sbjct: 275 AGERLNEGGFAQFLANWQHVE 295


>gi|242240726|ref|YP_002988907.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya dadantii
           Ech703]
 gi|242132783|gb|ACS87085.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech703]
          Length = 344

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W+D+    V +      F  R      +D+     L  +E     ++LD+  G G +   
Sbjct: 159 WQDYEVDGVSVRTLPGVFS-RDG----LDAGSQLLLSTLEAHRKGKVLDIACGAGVLASV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             + SP  +    D+S  ALE +++   +N +  +   L S+ +S + G FD+I+SNPP+
Sbjct: 214 FAQRSPKIRLTLSDVSAAALEASQATLASNQLEGQV--LASNVYSDIVGRFDLIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG    L     +  G + HLN+DG  
Sbjct: 272 H---------------------DGMQTSLHAAEMLIRGAASHLNQDGEL 299


>gi|315652701|ref|ZP_07905675.1| O-methyltransferase [Eubacterium saburreum DSM 3986]
 gi|315484903|gb|EFU75311.1| O-methyltransferase [Eubacterium saburreum DSM 3986]
          Length = 249

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 28/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + L  + D F         +D+ L  +  +++K      +DL TG+G V + L  ++  
Sbjct: 22  GLYLIQNPDKFCFG------IDAVLLSNFVKVKKDGYA--VDLCTGSGIVPILLSTKTKA 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K  G++I     ++A  +   N + E+ D +  D  ++++       D +  NPPY++ 
Sbjct: 74  KKITGIEIQSDIADMASRSVSYNKLDEKIDIINDDISNALKYIKHSCVDTVCVNPPYMKD 133

Query: 178 VIV---DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           +       L L +   +    L      L+   ++ +  ++ L ++G   +     +   
Sbjct: 134 MAAIKNPDLPLAIARHE----L------LTDLESVINIANKLLKENGRFFMIH---RPSR 180

Query: 235 VVRIFESRKLFLVN 248
           +  IF S K   + 
Sbjct: 181 LSEIFASMKQNRIE 194


>gi|164660454|ref|XP_001731350.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966]
 gi|159105250|gb|EDP44136.1| hypothetical protein MGL_1533 [Malassezia globosa CBS 7966]
          Length = 198

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 107 GTGAVCLALLK---ESPFFKGVGVDISCKALEIAKSNAVTNGV-----------SERFDT 152
           GTG + L L              VD    ALE+A+ NA  + +           S R+  
Sbjct: 92  GTGCIALTLAHGLRMHKDVHITAVDCDAAALELARENAKAHALDGDDDSDDALVSIRYAD 151

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +  D   ++ G FD++V NPPYI +     L   VRD++   +
Sbjct: 152 MLDDHSMALLGSFDLVVCNPPYIAADAWQDLDASVRDYESHGA 194


>gi|256832282|ref|YP_003161009.1| methyltransferase small [Jonesia denitrificans DSM 20603]
 gi|256685813|gb|ACV08706.1| methyltransferase small [Jonesia denitrificans DSM 20603]
          Length = 225

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V +  S+  F P       +D+  +  L  +       ++D+G G G + L +   +P
Sbjct: 35  RDVEVMTSAGVFSPGH-----IDTGTSVLLRTVGAPPSGTVVDVGCGWGPIALTMAMRNP 89

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             +   VD++ +++ +   NA    +      L SD       + D + SNPP
Sbjct: 90  DAQVWAVDVNERSVALTARNAQRLDLHCINAVLASDIPEDF--VVDELWSNPP 140


>gi|319775650|ref|YP_004138138.1| O-methyltransferase [Haemophilus influenzae F3047]
 gi|329122298|ref|ZP_08250886.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116]
 gi|317450241|emb|CBY86457.1| predicted O-methyltransferase [Haemophilus influenzae F3047]
 gi|327473859|gb|EGF19276.1| metallothionein SmtA [Haemophilus aegyptius ATCC 11116]
          Length = 232

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLTQADIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     +++
Sbjct: 141 --WLEWAAIRLSENGRISFVLPYEAGKTLIK 169


>gi|210623265|ref|ZP_03293682.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275]
 gi|210153666|gb|EEA84672.1| hypothetical protein CLOHIR_01632 [Clostridium hiranonis DSM 13275]
          Length = 251

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 24/172 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  ++D F    +  LL + A          ++  R+ DLGTGTG + L +  ++  
Sbjct: 18  GLKIIQNTDGFCFGTDAVLLANFA--------RVKNGARVADLGTGTGIIPLIIYGKNNV 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  E+A      N + ++ + + +D     E      FDV+ SNPPY+ S
Sbjct: 70  EKIYGVEIQEEVFEMASRTVKMNEIEDKIEIVNADLKEIKEVLPQNTFDVVTSNPPYMHS 129

Query: 178 VIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             V     +  +   + + +LD           +    S  L + G   +  
Sbjct: 130 EGVKNPNDKKMISRHEVKCNLD----------DVIKAASILLKERGKFFMIH 171


>gi|157690816|ref|YP_001485278.1| O-methyltransferase [Bacillus pumilus SAFR-032]
 gi|157679574|gb|ABV60718.1| possible O-methyltransferase [Bacillus pumilus SAFR-032]
          Length = 247

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 30/202 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL   A               I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIIQSKTVFAFSLDAVLLAKFAYVPI-------QKGEIIDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G V L LL         GV+I  +  ++AK +   N + ++ + +  D            
Sbjct: 57  GIVPL-LLSTRSKASITGVEIQDRLFDMAKRSVAYNQLEKQIELIHGDLNDMPARYGNHK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            DVI  NPPY ++   + +       +   +   +L            +    S  L + 
Sbjct: 116 VDVITCNPPYFKTPSKEEINENEYLAIARHEIHCTL----------EDVIRVSSTLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESR 242
           G  ++     + +++V + +  
Sbjct: 166 GKLAMVHRPGRLLEIVELMKKY 187


>gi|313817969|gb|EFS55683.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA2]
 gi|314960818|gb|EFT04919.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA2]
 gi|315086880|gb|EFT58856.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA3]
          Length = 206

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 38/169 (22%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +       V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I SNPP                            G +    I    
Sbjct: 123 RPEEVDP-DLRFDEIWSNPPIRV-------------------------GKAALHDILTTW 156

Query: 214 SRHLNKDGLCSVEIGYN------------QKVDVVRIFESRKLFLVNAF 250
              L+ +G+  + +G N            Q  D  R+  ++   +++  
Sbjct: 157 LARLSDEGVAHLVVGKNLGADSLTSWLCEQGFDAARVASAKGFRIIDVH 205


>gi|170291018|ref|YP_001737834.1| methylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175098|gb|ACB08151.1| methylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 181

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 25/163 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L      + P  ++ L++D AL   L           LDLGTG+G V + + K     
Sbjct: 1   MKLLRDDQIYWPAEDSLLMLD-ALDPDLS------GKVCLDLGTGSGIVAIEMAKRGCCT 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVD 181
             V  DIS ++  +A  NA  NG+     T+Q D       L FD+I  NPPY+      
Sbjct: 54  --VASDISPRSCLLASRNAELNGLE--VHTVQGDMTRHFRDLAFDLIAFNPPYLPGRG-- 107

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                    DPR +  GG  G      + D + R + +  L  
Sbjct: 108 ---------DPRWA--GGRRGRELIDALIDDLPRLMREKALIL 139


>gi|73663578|ref|YP_302359.1| methyltransferase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72496093|dbj|BAE19414.1| putative methyltransferase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 241

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 78/216 (36%), Gaps = 33/216 (15%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L++E +  +L      N+R+  + + F    +  LL           ++KRD   I+DL 
Sbjct: 3   LENERLDYLLKE----NLRIIQNDNVFSFSTDALLL------GHFTNVKKRDN--IMDLC 50

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---- 161
           +G G + L L  +        V+I  + +++A+ +   N + ER    Q D   +     
Sbjct: 51  SGNGVIPLVLSNKGQQM-IDAVEIQEQLVDMARRSITYNQLEERIHMYQMDLKEAHRYFK 109

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLN 218
              +D++  NPPY ++       ++       +   +L                    L 
Sbjct: 110 PSQYDLVTCNPPYFKTNQQHQHQIDAHKIARHEIMCTLA----------DCCYAARHLLK 159

Query: 219 KDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           + G   +     +   ++ +    + + +   K Y 
Sbjct: 160 QGGRFIMVH---RAERLMDVLSHMRTYQIEPKKIYF 192


>gi|324990614|gb|EGC22550.1| methyltransferase [Streptococcus sanguinis SK353]
 gi|324995336|gb|EGC27248.1| methyltransferase [Streptococcus sanguinis SK678]
 gi|325688273|gb|EGD30292.1| methyltransferase [Streptococcus sanguinis SK72]
 gi|327461626|gb|EGF07957.1| methyltransferase [Streptococcus sanguinis SK1]
 gi|327489483|gb|EGF21276.1| methyltransferase [Streptococcus sanguinis SK1058]
 gi|328945527|gb|EGG39678.1| methyltransferase [Streptococcus sanguinis SK1087]
          Length = 248

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKKSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|302525712|ref|ZP_07278054.1| rRNA/tRNA methylase [Streptomyces sp. AA4]
 gi|302434607|gb|EFL06423.1| rRNA/tRNA methylase [Streptomyces sp. AA4]
          Length = 507

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 66/173 (38%), Gaps = 22/173 (12%)

Query: 76  PETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE  +L V  A    +    +R V  +LDLGTG G   L   + +   +    D+S +AL
Sbjct: 143 PEDHVLGVGHASLSLIRATSRRPVGTLLDLGTGNGVQALHATRHAQ--RVTATDVSARAL 200

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A      N +    + L+ +WF+ V    FD IV NPP++  V    +    R     
Sbjct: 201 ALAAGTFRLNELE--VELLRGEWFAPVARRRFDQIVCNPPFV--VGPPRVDYTYR----- 251

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFE 240
              D G+ G      +   +   LN  G   +        G +    V R   
Sbjct: 252 ---DSGLAGDDASALVVRQLPSFLNDGGTGQLLASWLHRRGEDWGDRVARWLP 301


>gi|313124290|ref|YP_004034549.1| 16S RNA methylase rsmc [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280853|gb|ADQ61572.1| 16S RNA methylase RsmC [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
          Length = 200

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+ LT  +  F + R +  + +L++  L   LP         ILD+G G G + L   K+
Sbjct: 27  NLNLTTDAGVFSKNRVDYGSGVLIEQMLDQELP------GGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+        +   +   SD +  V G + +IV+NPP     
Sbjct: 81  WPGRQVDMVDVNERAMDLARR-NAAANGAGNVNIFASDRYQEVSGQYAMIVTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G + + +I      HL   G+  V I   Q      +
Sbjct: 138 -----------------------GKAIWSSILSEAKDHLIDGGILLVVIQKKQGAPSAKK 174

Query: 238 IFES 241
           +  +
Sbjct: 175 LMAA 178


>gi|301169123|emb|CBW28720.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus influenzae 10810]
          Length = 240

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 38  WADVKHCKNILDMGCGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINDSVWKNRI 97

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D    ++     FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     + +
Sbjct: 149 --WLEWAATRLSENGKISFVLPYEAGKTLTK 177


>gi|298346686|ref|YP_003719373.1| putative 16S rRNA methyltransferase [Mobiluncus curtisii ATCC
           43063]
 gi|298236747|gb|ADI67879.1| possible 16S rRNA methyltransferase [Mobiluncus curtisii ATCC
           43063]
          Length = 167

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P  E      ++D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+    
Sbjct: 17  PSQELGGSGVLVDVGCGWGPLALTLAAECPSAQVYAVDVNARALELTRANATANGLHNIQ 76

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPP 173
              ++D F+++     DVI SNPP
Sbjct: 77  VLSEADAFAALGPNSVDVIWSNPP 100


>gi|322389141|ref|ZP_08062703.1| methyltransferase [Streptococcus parasanguinis ATCC 903]
 gi|321144151|gb|EFX39567.1| methyltransferase [Streptococcus parasanguinis ATCC 903]
          Length = 248

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P++ KR +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + +GV+I  +  ++A  +   NG++++   +  D       ++G   D+I+ NPPY + 
Sbjct: 70  AQILGVEIQERLADMATRSIALNGLNQQMSMITDDLKHLPRHIKGSKVDIILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +LD           I     R L  +G  ++    ++ +
Sbjct: 130 DEHSNLNESEHYLLARHEITTNLD----------EICHVAQRVLKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 180 DIIETMKRYNL 190


>gi|297625830|ref|YP_003687593.1| methyltransferase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921595|emb|CBL56149.1| methyltransferase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 209

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R LDLG G G + +AL  E P  +   +D++ +A+E+   NA   GV+ +      D 
Sbjct: 68  PARFLDLGCGFGPIAVALATECPRARVDAIDVNERAVELTAMNAKALGVASQVSASAPDQ 127

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRH 216
             + +  +D I SNPP    +    L   +  +  R++ DG    L     + +D +++ 
Sbjct: 128 VPA-DVRYDEIWSNPPI--RIGKPALHELLDTWLNRLTDDGVAH-LVVAHNLGSDSLAKW 183

Query: 217 LNKDGL 222
           L   G 
Sbjct: 184 LTGQGW 189


>gi|296328879|ref|ZP_06871390.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154000|gb|EFG94807.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 223

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + +E A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIERANKALKLNRIEKNIQFECMDVKEYKKSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   GL       ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGLLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|19704242|ref|NP_603804.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714472|gb|AAL95103.1| Ribosomal RNA small subunit methyltransferase C [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 223

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + +E A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIERANKALKLNRIEKNIQFECMDVKEYKKSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   GL       ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGLLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|227495176|ref|ZP_03925492.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
           15436]
 gi|226831628|gb|EEH64011.1| possible 16S rRNA methyltransferase [Actinomyces coleocanis DSM
           15436]
          Length = 218

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 28/196 (14%)

Query: 61  YNVRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++++ ++   F      P T++L+           E     R LD+G G G +   L K
Sbjct: 42  FDLQMQVADQVFSASRLDPGTKVLLKEV-------PEPPASGRFLDVGCGWGVISTLLGK 94

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPY 174
            SP  K   VD++ +AL++ K NA  NG +        +           FD+I SNPP 
Sbjct: 95  FSPDAKIWAVDVNGRALDLTKRNANANGCTNVETYYAHEALEKARAEGLQFDLIWSNPPI 154

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKV 233
              V        + D+   ++ D G+  L   + + AD ++  LN           +Q  
Sbjct: 155 --RVGKAETHQILLDWLSLLA-DEGVAWLIVAKNLGADSLTTWLN-----------DQGF 200

Query: 234 DVVRIFESRKLFLVNA 249
              +    +   L+  
Sbjct: 201 QAEKAASKKGFRLLRV 216


>gi|83645041|ref|YP_433476.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396]
 gi|123533712|sp|Q2SJX3|RSMC_HAHCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|83633084|gb|ABC29051.1| 16S RNA G1207 methylase RsmC [Hahella chejuensis KCTC 2396]
          Length = 342

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 28/163 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L      F         +D      L  + +    R+LD G G G +   L K  P  
Sbjct: 173 LQLFTLPGVFSAGR-----LDEGTEVLLQSLPELHGRRLLDFGCGCGVIGATLKKRYPKA 227

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                DI+  AL+ A   A  NGV        SD  + V+   D I++NPP+ + V  D 
Sbjct: 228 SVELTDINLLALKSAARTAEANGVELNV--YASDGLAEVQPGVDAIITNPPFHQGVKQDT 285

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                   +      +R L   G  ++
Sbjct: 286 ---------------------RVTQQFLRDCARVLKPGGSLTL 307


>gi|237741850|ref|ZP_04572331.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13]
 gi|229429498|gb|EEO39710.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 4_1_13]
          Length = 223

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQVSLNKKNIKLLDIGTGNGILPILLSDNEFLSELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANMALELNKIEKNIQFKCMDIREYKNSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   GL       ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLT----------ELISNAKRLLKPIGLLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|168215155|ref|ZP_02640780.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|170713428|gb|EDT25610.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
          Length = 256

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      +     FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIEDKVSFVCGDLKDKELNKSMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|302869938|ref|YP_003838575.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
 gi|302572797|gb|ADL48999.1| methyltransferase small [Micromonospora aurantiaca ATCC 27029]
          Length = 223

 Score = 77.4 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G +   L   +P      VD++ +A  +  +NA   G ++R   +  D     
Sbjct: 88  LDIGCGFGPITCVLATVAPKATVWAVDVNERARALTTANAARVGAADRVRAVAPDELPD- 146

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKD 220
           +  F  I SNPP    +    L   +  + PR++ D G+  L   R +  D + R L + 
Sbjct: 147 DVTFSQIWSNPPI--HIGKPELHGLLLRWLPRLAPD-GVAWLVVARHLGGDSLHRWLVEQ 203

Query: 221 GLCSVEIGYNQK 232
           G  SVE   +QK
Sbjct: 204 GW-SVERHASQK 214


>gi|323352686|ref|ZP_08087656.1| methyltransferase [Streptococcus sanguinis VMC66]
 gi|322121722|gb|EFX93468.1| methyltransferase [Streptococcus sanguinis VMC66]
          Length = 248

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +  +       D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAERSIELNDLTQQMQIIQDDLKNLGQYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++ KL
Sbjct: 180 DILDTMQAHKL 190


>gi|21623225|gb|AAM67873.1| hypothetical 37.6 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 195

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D    F      ++   +ILD+G G+G + +++L++SP      +D    ALE +K+  
Sbjct: 39  IDEGSKFIASTFSEKINGKILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATL 98

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N      + L S+ +S++   F++IVSNPP  + + ++                    
Sbjct: 99  DANFFKG--EVLSSNIYSNIFKKFNMIVSNPPLHDDLKIN-------------------- 136

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                + I     +HL K+G    
Sbjct: 137 -FDITKKIIFNSKKHLKKNGELRF 159


>gi|30410819|ref|NP_660662.2| hypothetical protein BUsg319 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|25091200|sp|Q8K9L5|RSMC_BUCAP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 336

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D    F      ++   +ILD+G G+G + +++L++SP      +D    ALE +K+  
Sbjct: 180 IDEGSKFIASTFSEKINGKILDVGCGSGFLSVSILRKSPKCVVTMIDRKLSALESSKATL 239

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N      + L S+ +S++   F++IVSNPP  + + ++                    
Sbjct: 240 DANFFKG--EVLSSNIYSNIFKKFNMIVSNPPLHDDLKIN-------------------- 277

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                + I     +HL K+G    
Sbjct: 278 -FDITKKIIFNSKKHLKKNGELRF 300


>gi|258404841|ref|YP_003197583.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
 gi|257797068|gb|ACV68005.1| methyltransferase small [Desulfohalobium retbaense DSM 5692]
          Length = 249

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 14/158 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                 ++LDLG G G V   L    P  +  GVD + + +  A+ NA   G+ +R   +
Sbjct: 34  PAPTGTQVLDLGAGCGVVGFGLALRQPGIQLTGVDCNPEMVAAARENAARLGLEQRAVFV 93

Query: 154 QSDWF-------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++D               F ++V NPPY +           R    + +   G  GL   
Sbjct: 94  EADAALVRDTATPLDPESFPLVVCNPPYRDPETGRSCNDAAR----QQARFAGKQGL--- 146

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               +  +  L   G   +     +   ++ +    +L
Sbjct: 147 HAFVEAAAYVLCNRGRLCLVYLAERLPALLTLLRDHRL 184


>gi|219130619|ref|XP_002185459.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403173|gb|EEC43128.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 647

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 43/190 (22%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +S+      P++  LV   L  S           +LDL TG+G   LA L      + V 
Sbjct: 263 VSNAVMYIGPDSLALVQHWLQSSRI----PSCGSLLDLCTGSGVQALAALTMEKANQAVC 318

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------------------------- 160
           VD++ +AL++ + NA+ N +  +   +  D  S                           
Sbjct: 319 VDLNPRALQMTRLNAILNDLDTKVQCVLGDLTSDVGRIYTNSEGSHDLAIDDKAQPLLDV 378

Query: 161 ---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD--GGIDGLSHYRTIADGVSR 215
              +   FD+I +NPP++       +  E+     R  L   GG  G +   +I    S 
Sbjct: 379 LRRISPRFDLITANPPFLP------VPPEITQA--RHGLFSAGGPSGEAVLASIVQLSSS 430

Query: 216 HLNKDGLCSV 225
            L+  G  ++
Sbjct: 431 LLSNTGFLAI 440


>gi|109900269|ref|YP_663524.1| methyltransferase small [Pseudoalteromonas atlantica T6c]
 gi|122971506|sp|Q15NR8|TRMN6_PSEA6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|109702550|gb|ABG42470.1| methyltransferase small [Pseudoalteromonas atlantica T6c]
          Length = 263

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 11/161 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           I   +  R LD+GTG+G + + L  K S      G+DI   A+  A  N   +  S R D
Sbjct: 39  INASETQRFLDIGTGSGLLAIMLAQKSSEQTHISGIDIDKDAIGQATRNMANSPWSHRLD 98

Query: 152 TLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             Q+   S         F +I+SNPPY  S I+       +    R++          + 
Sbjct: 99  AQQASVQSFTQNCDNPKFALIISNPPYFNSPILTHEKQAQK----RVA--ARQTSELTHH 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           T+ + V R L   G+    +  +     + + +   L L+ 
Sbjct: 153 TLLNNVVRLLAPSGVFYCVLPSDVSQAFIELADPLGLSLIK 193


>gi|308176885|ref|YP_003916291.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307744348|emb|CBT75320.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 201

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 6/124 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                RILD+G G G + L   ++SP  +  GVD++ +++++A+ NA   G+S       
Sbjct: 55  PTPRGRILDIGCGWGPITLTAAEQSPDSEVYGVDVNERSIDLARLNATAFGLSNVVVGSP 114

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGV 213
                S+   FD I SNPP    +  D L   +  + PR++  GG   +   + + +D +
Sbjct: 115 DSIDPSL--QFDTIWSNPPI--RIGKDALHELLMLWLPRLAP-GGEAWMVVQKNLGSDSL 169

Query: 214 SRHL 217
            + L
Sbjct: 170 QKWL 173


>gi|145634581|ref|ZP_01790290.1| phosphatidylserine synthase [Haemophilus influenzae PittAA]
 gi|148825297|ref|YP_001290050.1| phosphatidylserine synthase [Haemophilus influenzae PittEE]
 gi|229844417|ref|ZP_04464557.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1]
 gi|262828354|sp|A5UA66|TRMN6_HAEIE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|145268126|gb|EDK08121.1| phosphatidylserine synthase [Haemophilus influenzae PittAA]
 gi|148715457|gb|ABQ97667.1| phosphatidylserine synthase [Haemophilus influenzae PittEE]
 gi|229812666|gb|EEP48355.1| phosphatidylserine synthase [Haemophilus influenzae 6P18H1]
          Length = 232

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D    ++     FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y+    +++
Sbjct: 141 --WLEWAATRLSENGRISFVLPYDAGKTLIK 169


>gi|312114271|ref|YP_004011867.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
 gi|311219400|gb|ADP70768.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
          Length = 336

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 60  FYNVRL-TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +    T + D     P+T   VD+  A+   R     V R  D+  G G   +A+ K 
Sbjct: 118 FMHSAFPTTARDAVFFGPDTYKFVDAINAWLNGR--AGQVGRAADVCAGAGPGGIAIAKA 175

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  + + +D++ KA++ A  NA   G         S+ FS+  G FD++VS+PPY+   
Sbjct: 176 CPGAEVLLLDLNPKAVDFAAVNAAVAG-RPNACATMSNLFSNAAGSFDLVVSHPPYL--- 231

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +D      R     +     I       TI       L+  G   +  G
Sbjct: 232 -IDASERAYRHGGGPLGAGLAI-------TIIKAAIERLSPSGTLLLFTG 273


>gi|116492640|ref|YP_804375.1| O-methyltransferase [Pediococcus pentosaceus ATCC 25745]
 gi|116102790|gb|ABJ67933.1| Predicted O-methyltransferase [Pediococcus pentosaceus ATCC 25745]
          Length = 251

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 19/188 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F         +D+ L  +   ++K    +I+DL +G GAV L L K++  
Sbjct: 18  DIQIIQSPSVFSFS------LDAVLLANFAEVKKASKTKIVDLCSGNGAVGLFLSKKTAG 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
                V+I  +  E+A  +   N +++R+D        ++  +     D IV NPPY   
Sbjct: 72  -HVTMVEIQSRLAEMAMRSIQLNDLTDRYDVYNMPLKDALTKINADSIDNIVCNPPYF-- 128

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              + L    ++ +  ++L      L+     +     + L  +G   +    ++  +++
Sbjct: 129 ---EDLPSSKKNPNEHLALARHE--LTTSLEEVLQVSQKMLKMNGKLFLVHRPDRLPEIL 183

Query: 237 RIFESRKL 244
                 +L
Sbjct: 184 TKLVKNRL 191


>gi|51594923|ref|YP_069114.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186893923|ref|YP_001871035.1| 16S ribosomal RNA m2G1207 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|81640466|sp|Q66EW9|RSMC_YERPS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226725328|sp|B2K3H9|RSMC_YERPB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|51588205|emb|CAH19812.1| ribosomal RNA small subunit methyltransferase C [Yersinia
           pseudotuberculosis IP 32953]
 gi|186696949|gb|ACC87578.1| Methyltransferase small domain protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 347

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 31/170 (18%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W + Y   +V +      F       L  DS     L    +     +LD+G G G +  
Sbjct: 158 WWESYQVGSVTVKTLPGVF---SRDSL--DSGSHLLLSTFNEPFKGSVLDVGCGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L ++SP  K    D+S  A+E +++    N +  +   + S+ +S ++G F++I+SNPP
Sbjct: 213 VLAQQSPKIKWTLSDVSAAAIEASRATLAVNNIEAQV--IASNVYSDIKGRFEMIISNPP 270

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +                      DG    L+    +  G + HL+  G  
Sbjct: 271 FH---------------------DGIQTSLTAAEMLIRGATAHLHVGGKL 299


>gi|67463595|ref|XP_648448.1| DNA methyltransferase [Entamoeba histolytica HM-1:IMSS]
 gi|56464604|gb|EAL43060.1| DNA methyltransferase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 210

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 18/161 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + ++P  ++ LL+D  L      I   + +  L++G G+G V   + +  P       DI
Sbjct: 18  NVYKPDIDSYLLMD-VLEKEREFINSHEPMTSLEIGVGSGIVSKYVKELFPRITTFCSDI 76

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  ALE  K       V    + ++S    S+ +   D+ + NPPY+ +   +     + 
Sbjct: 77  NPYALECTKK------VHREGNLIKSSLIESIRDESIDLFIYNPPYVPTPEEELHQSYI- 129

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
                +S  GG DG      + + +   L+  G     IGY
Sbjct: 130 ----SLSWAGGKDGREKIDCVIEHLWDILSPKG-----IGY 161


>gi|209694152|ref|YP_002262080.1| hypothetical protein VSAL_I0559 [Aliivibrio salmonicida LFI1238]
 gi|262827863|sp|B6EMW5|TRMN6_ALISL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|208008103|emb|CAQ78244.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 234

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 12/170 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +   IE+     ILD+G GTG + L   + +       V++   A E+A  N V
Sbjct: 24  DGVLLGAWANIEQSKN--ILDIGCGTGLLSLMSAQRNENSHVDAVELMPLAAEVALQNFV 81

Query: 143 TNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +    R   +  D        L+D I+ NPPY  +      G      +  I+     D
Sbjct: 82  QSPWKNRLHLIHQDILHYHPAHLYDAIICNPPYFNNGEQSQKG------ERSIA--RHTD 133

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            L     +       ++  G  S  + + +    + I +     L    K
Sbjct: 134 SLPF-DKLLKCCKALMSSKGRASFILPFIEGNQFIEIAKKHSFHLTKLTK 182


>gi|110803474|ref|YP_697596.1| hypothetical protein CPR_0266 [Clostridium perfringens SM101]
 gi|110683975|gb|ABG87345.1| conserved hypothetical protein [Clostridium perfringens SM101]
          Length = 249

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 33  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEVVGIEIQEEFAEMANRSA 90

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N V ++   +  D      +     FDV+  NPPY            + + + ++++ 
Sbjct: 91  KINDVQDKVSFICGDLKDKELNRSMPKFDVVTVNPPY------KLNNAGIINSEDKLAIA 144

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 145 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 196


>gi|315223192|ref|ZP_07865053.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
 gi|315187624|gb|EFU21378.1| methyltransferase small domain protein [Streptococcus anginosus
           F0211]
          Length = 248

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P + KR +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG++ +   +Q D       ++G   D+I+ NPPY + 
Sbjct: 70  AQIIAVEIQERLADMAERSIELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DEHSNLNASRHYLLARHEIATNL----------EEICRISQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++    +  L
Sbjct: 180 DIIDTMIAHNL 190


>gi|295706648|ref|YP_003599723.1| ribosomal protein L11 methyltransferase [Bacillus megaterium DSM
           319]
 gi|294804307|gb|ADF41373.1| ribosomal protein L11 methyltransferase [Bacillus megaterium DSM
           319]
          Length = 313

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 54/218 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+      R T+      +E     EL+++     +         V        
Sbjct: 112 TAWKKYYHPVKISERFTIVPTWENYEKVSTDELIIELDPGMAFGTGTHPTTVMSLQALER 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +             +D+   A+  A+ N   N V       
Sbjct: 172 TVKAGDTVIDVGTGSGVLSIGAAL-LGASNVQALDLDEVAVRSARENIELNQVGNVVTVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  D++V+N                      ++               D  
Sbjct: 231 QNNLLQGIEGPVDIVVAN---------------------ILA--------EVIVRFVDDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           ++ L   G+      I    K DV +        +   
Sbjct: 262 AKVLKPGGMFITSGIISAK-KEDVKKALTGAGFVIQEV 298


>gi|284161197|ref|YP_003399820.1| methylase [Archaeoglobus profundus DSM 5631]
 gi|284011194|gb|ADB57147.1| methylase [Archaeoglobus profundus DSM 5631]
          Length = 183

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 22/189 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +  TL +  + P  ++ELL++ AL       E R+   +L++G G+G V   + ++  F 
Sbjct: 1   MDFTLDT-VYPPAEDSELLLEVALR------EVREDDEVLEVGVGSGFVAEKIKEKCQFL 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             +  DI+  A ++A+         +  D +++D    +   F +I+ NPPY+E   ++ 
Sbjct: 54  --LATDINPFACKMARE--------KGIDVVRTDLVKGIRKKFTLILFNPPYLELDEIER 103

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            G  +       ++DGG  G+       D V   L++ G   + +       V    E R
Sbjct: 104 KGDWLEK-----AIDGGKGGIEVICRFLDLVRDVLDERGRIILIVSSFNVPHVFEKIEKR 158

Query: 243 KLFLVNAFK 251
                   K
Sbjct: 159 GFRWKIVAK 167


>gi|154175164|ref|YP_001408352.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92]
 gi|112803155|gb|EAU00499.1| UDP-MurNac-pentapeptide presynthetase [Campylobacter curvus 525.92]
          Length = 237

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 20/183 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    +T +L      F   R+       +LD+G G G + L L ++    
Sbjct: 1   MRLAQLENGYRYNSDTLVL----YGFIKDRLNAWFKGEVLDVGCGCGVLGLLLKRDFKGA 56

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +D+    LEI++ NA  NG+  +        F S E  FD+IVSNPP+    +   
Sbjct: 57  SLSLLDVQDINLEISRQNARANGLEAKILNADFAGFKS-ETKFDLIVSNPPFYHDGVKQS 115

Query: 183 LGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
               ++   +   +SL G             G + +L   G       Y+    V  IF 
Sbjct: 116 AVEHLKLSRYASALSLCG----------FIAGANVNLKPKGELFF--CYDTAE-VAEIFA 162

Query: 241 SRK 243
           + K
Sbjct: 163 ALK 165


>gi|146291992|ref|YP_001182416.1| type 12 methyltransferase [Shewanella putrefaciens CN-32]
 gi|262829161|sp|A4Y3T4|TRMN6_SHEPC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|145563682|gb|ABP74617.1| Methyltransferase type 12 [Shewanella putrefaciens CN-32]
          Length = 238

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  +ILD+G G+G + L +  +        +++   A    + N   +  + R  
Sbjct: 29  WAPLTNAKQILDIGAGSGILGL-MAAQRSQANITCIELDNTAAIACQHNIAQSPWASRIR 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +Q            +G FD I+ NPPY E      L           ++    D LS  
Sbjct: 88  LVQGSIQQLSQAEEYQGYFDHIICNPPYFEHGPQAQLSQ--------RAMARHTDQLSF- 138

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             +   + + L+ +GL S+ +      +   +    +L  V 
Sbjct: 139 NELLAAIEQCLSPNGLASLILPIQSLHNFNHLLSQSRLEWVE 180


>gi|284006323|emb|CBA71558.1| 16S RNA methyltransferase C [Arsenophonus nasoniae]
          Length = 338

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 31/187 (16%)

Query: 40  NAIVRSLKHESIHRILGWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
           +     L+ +    +  W + Y   ++ +      F     ++  +D+     L   +  
Sbjct: 141 SLYYCQLEKQPQFHLADWWNSYKVADITIKTLPGVF-----SQQALDAGSQLLLSTFQTP 195

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+ +G G +   + K++P  K    D    A+  +      NG++     L SD
Sbjct: 196 IKGKLLDMASGCGVLSTVIGKKNPNIKLTLCDTHAAAIRSSIETLKINGLTGHI--LPSD 253

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +S++E  +D I+ NPP+ + +  D    E                     TI      +
Sbjct: 254 IYSTIEDSYDWIICNPPFHDGLKTDYTAAE---------------------TIIKQAPNY 292

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 293 LKPGGKF 299


>gi|307132127|ref|YP_003884143.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Dickeya dadantii 3937]
 gi|306529656|gb|ADM99586.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Dickeya dadantii 3937]
          Length = 254

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
               R+  RILD+G G+G + L L + S       GV++   A E A  NA  +  ++  
Sbjct: 48  WTPLREESRILDIGCGSGLIALMLAQRSGGRIPVDGVELDVAASEQAAGNAAASPWADSI 107

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q D  +   +V   + +IVSNPPY    V           +   ++          +
Sbjct: 108 RIHQIDILAYARAVASRYSLIVSNPPYFTPGVDCASAQRAQARYTATLT----------H 157

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            T+ D  SR L  DG   V +        + + +     
Sbjct: 158 ETLLDCASRLLTPDGRFCVVLPVQAADAFLELAQQLAWH 196


>gi|256384417|gb|ACU78987.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385249|gb|ACU79818.1| methyltransferase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455741|gb|ADH21976.1| methyltransferase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 240

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 19/159 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                +I D GT    + L +L +    K +GV+I  KA+EIAK N   NG+ E+ + + 
Sbjct: 38  NSKKKKICDFGTNNAVIPL-ILSKYTKAKIIGVEIQNKAVEIAKQNIKLNGLEEQIEIIH 96

Query: 155 SDW--FSSVEGL-FDVIVSNPPYIE---SVIVDCLGLEVRD--FDPRISLDGGIDGLSHY 206
           +D   FS +    FD++V NPP+ +   +  +  + LEV +   +  I+L          
Sbjct: 97  ADIKEFSKLHNQEFDLVVCNPPFFKMDGNPKLKEISLEVANARHELLITL---------- 146

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             I    SR L   G  ++     +  +++ +F    ++
Sbjct: 147 EDIIKSASRCLKNKGNFTIVHRSERLSEIINLFYKYNIY 185


>gi|224475620|ref|YP_002633226.1| hypothetical protein Sca_0128 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420227|emb|CAL27041.1| conserved hypothetical protein with SAM binding motif
           [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 263

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 29/197 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +  + + F    +  LL           + K D  +++DL +G G + L LL     
Sbjct: 36  DLEIIQNDEVFSFSTDALLL------GHFTHLRKND--KVMDLCSGNGVIPL-LLSHKGQ 86

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIES 177
                ++I  + + +A+ +   N +SER    + D        +   + V+  NPPY ++
Sbjct: 87  HPIDAIEIQPQLVNMAERSIQHNQLSERIQIYEMDLKNVRQDFIPSQYTVVTCNPPYFKT 146

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +     E       +   +L              +     L + G   +     +   
Sbjct: 147 AQMHQHQKEAHKIARHEVLCTL----------EDCVEAARHLLKQGGRLIMVH---RAER 193

Query: 235 VVRIFESRKLFLVNAFK 251
           ++ +  + +   +   K
Sbjct: 194 LMDVLSTYRAARIEPKK 210


>gi|332290180|ref|YP_004421032.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330433076|gb|AEC18135.1| 16S ribosomal RNA m2G1207 methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 334

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 35/182 (19%)

Query: 49  ESIHRIL-GWRDFYNVR------LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           + +   L  W   Y++       +      F     +  L D      L  +++    ++
Sbjct: 143 KPVQFALSDWWKQYSLPQLPQLTIYALPGVFS----SGEL-DQGTDLLLSTLQQPIQGKV 197

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G +   L   SP       DI   AL  A           +   + SD FS +
Sbjct: 198 LDVGCGAGVIGAYLKFHSPQIDLTMSDIHAMALASATQ--TLQQNQLQGSVIASDVFSHI 255

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD+I+SNPP+   +      +E                     T+     +HLN+ G
Sbjct: 256 NDKFDLIISNPPFHSGLDTAYQAVE---------------------TLITEAKQHLNRGG 294

Query: 222 LC 223
             
Sbjct: 295 EL 296


>gi|104774443|ref|YP_619423.1| putative methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116514542|ref|YP_813448.1| 16S RNA G1207 methylase RsmC [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|103423524|emb|CAI98426.1| Putative methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116093857|gb|ABJ59010.1| 16S rRNA m(2)G 1207 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|325126253|gb|ADY85583.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 200

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 36/184 (19%)

Query: 62  NVRLTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+ LT  +  F + R +  + +L++  L   LP         ILD+G G G + L   K+
Sbjct: 27  NLNLTTDAGVFSKTRVDYGSGVLIEQMLDQELP------GGNILDVGCGYGPIGLFAAKK 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++ +A+++A+        +   +   SD +  V G + +IV+NPP     
Sbjct: 81  WPGRQVDMVDVNERAMDLARR-NAAANGAGNVNIFASDRYQEVFGQYAMIVTNPPIRA-- 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVR 237
                                  G + + +I      HL   G+  V I   Q      +
Sbjct: 138 -----------------------GKAIWSSILSEAKGHLTDGGILLVVIQKKQGAPSAKK 174

Query: 238 IFES 241
           +  +
Sbjct: 175 LMAA 178


>gi|220912236|ref|YP_002487545.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
 gi|219859114|gb|ACL39456.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
          Length = 207

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 10/137 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPF 121
             L  S+  F P       +D   A  L  +        +LD+G G G + L +  ++P 
Sbjct: 29  RTLQTSNGIFSPDG-----IDKGTAVLLAEVPAPAATGNLLDIGCGWGPIALTMALKAPH 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   VD++ + + +   NA   G+S    +       +V   FD I SNPP    +  D
Sbjct: 84  AQVYAVDVNERCIALTNGNAAALGLSNVAASTPDAVDPAV--QFDTIWSNPPI--RIGKD 139

Query: 182 CLGLEVRDFDPRISLDG 198
            L   ++ + PR++  G
Sbjct: 140 ELHSLLKLWLPRLAPGG 156


>gi|259415189|ref|ZP_05739111.1| methyltransferase small [Silicibacter sp. TrichCH4B]
 gi|259349099|gb|EEW60853.1| methyltransferase small [Silicibacter sp. TrichCH4B]
          Length = 262

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   R+TL    F+P+      VD  L      +  R    +L+LG G G   L L    
Sbjct: 17  FLGGRITL----FQPKSGYRAGVDPVL--LAAAVNARPGQSVLELGCGAGQAFLCLAARV 70

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV-EGLFDVIVSNPPYIES 177
              K  GV++     E+A+ NA  N  +    T   SD  + + +  FD +++NPPY  +
Sbjct: 71  QDLKITGVELQAAYAELARRNAAENATAAHVATANLSDLPADLRQQRFDHVIANPPYYRA 130

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                     R    R +L G    L  +    D  +R L   G  
Sbjct: 131 GAHSQASDAGR----RTAL-GEGTPLELW---FDVAARRLAPKGYL 168


>gi|270265309|ref|ZP_06193570.1| methyltransferase small [Serratia odorifera 4Rx13]
 gi|270040713|gb|EFA13816.1| methyltransferase small [Serratia odorifera 4Rx13]
          Length = 476

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 17/163 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G+G+G + L L + S        V++   A E A+ N + +   +R 
Sbjct: 269 WAPLAQARRVLDIGSGSGLIALMLAQRSADNVLIDAVELDEAAAEQARDNVLASPWPQRI 328

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSH 205
                D         G +D+IVSNPPY E  +   D      R  +              
Sbjct: 329 RVHAQDIHHFARHHAGEYDLIVSNPPYFEPAVACRDRARHNARYTETLT----------- 377

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  +     R + + G   V + ++           R      
Sbjct: 378 HDALLASAERLIAERGAFCVVLPHDIGEAFESNAHRRGWHTAQ 420


>gi|257125089|ref|YP_003163203.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b]
 gi|257049028|gb|ACV38212.1| O-methyltransferase-like protein [Leptotrichia buccalis C-1013-b]
          Length = 220

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 18/200 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N ++ +  +  +   +  LL +    +   + + ++   IL++G G G + L L K   F
Sbjct: 11  NKKMIIDENGLKITQDAILLSEFIKKYFNTKYKNKEKKTILEIGAGQGIITLLLSKIEIF 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY--IESVI 179
            K   V+I     EI K N   N + E+  ++  D   +++G +D I SNPPY  I S  
Sbjct: 71  EKIFAVEIQKDIFEILKKNIKINNLEEKITSINEDI-KTIKGEYDFIFSNPPYKKINSGK 129

Query: 180 VDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +     E +  ++  ++L            +   + R L   G   V +  ++  DV R 
Sbjct: 130 LPENEAEQISKYEILLTL----------EELFYEIKRLLKNYGEFFVIVPDDRLNDVFRY 179

Query: 239 FESRKL----FLVNAFKDYG 254
             +  +      +N +K   
Sbjct: 180 IYANNMNILSIEINKYKKLN 199


>gi|116671900|ref|YP_832833.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116612009|gb|ABK04733.1| methyltransferase small [Arthrobacter sp. FB24]
          Length = 547

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 58/171 (33%), Gaps = 26/171 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                 R +  L +  A    +    +R V R LDLGTG G     LL  +        D
Sbjct: 163 PGVL--RHDHVLGIGQASTTLVQTTIRRQVPRALDLGTGCGIQTFHLLHHAD--HVTATD 218

Query: 129 ISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES- 177
           IS +AL   + N + N            +R           V G  FD++VSNPP++ + 
Sbjct: 219 ISARALAFTRFNLLLNAGALGIDPATPEDRVSLRLGSLLEPVAGEAFDLVVSNPPFVITP 278

Query: 178 ---VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        R        DGG+ G     ++   +   L   G   +
Sbjct: 279 RSVGEAAADQYTYR--------DGGLPGDDIVASLVRELPSVLTPAGTAQL 321


>gi|330447421|ref|ZP_08311070.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491612|dbj|GAA05567.1| S-adenosyl-L-methionine-dependent methyltransferase [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 236

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 13/160 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   R+LD+GTG+G + L   + +P      ++I  +A   A+ N   +   ER  
Sbjct: 31  WAALPQQGRLLDIGTGSGLLALIAAQRAPMLSIEAIEIDPQAANAARQNFAASPWHERLH 90

Query: 152 TLQSD----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            ++ D      S      D I+ NPPY                    +     D  +H +
Sbjct: 91  CIEQDITLWLQSQPSNSVDGIICNPPYFNFGQQAESQ--------HRATARHTDTFTH-Q 141

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
            +   +   L + G+ ++ +   +   ++   ++  L  +
Sbjct: 142 QLLHTLEYLLTEQGVANIILPTYEGECLIAAAKAFNLHCI 181


>gi|72162084|ref|YP_289741.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX]
 gi|71915816|gb|AAZ55718.1| 16S rRNA m(2)G 1207 methyltransferase [Thermobifida fusca YX]
          Length = 205

 Score = 77.1 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 18/163 (11%)

Query: 68  SSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
               F P R +  T +L+++            D   +LDLG G G + LA+   +P    
Sbjct: 33  DRGVFSPDRIDLGTRILLETV-------PPPPDHGTLLDLGCGYGPIALAMALRAPKATV 85

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVI 179
           VG+D + +AL +A+ NA  N V       ++          + G F  + SNPP    + 
Sbjct: 86  VGIDTNQRALALARRNAEANAVP-NVSFHRAPGPEDPVDPLLRGPFAALWSNPPI--RIG 142

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
              L   +  +  R++       + H    AD + R L+  G 
Sbjct: 143 KQALHTLLTTWLDRLADGAYAHSVVHKHLGADSLHRWLDASGY 185


>gi|237744555|ref|ZP_04575036.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           7_1]
 gi|229431784|gb|EEO41996.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           7_1]
          Length = 202

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 19/179 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + VG+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELVGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FD+I+SNPPY+          E +  
Sbjct: 79  ENIDRANKALQLNKIEKNIQFECMDIREYKKSNYFDIIISNPPYMNDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
              + ++SL            +     R L   GL       ++ V++++  +     +
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGLLYFIHRTHRLVEIIKALDKNNFSI 187


>gi|157119350|ref|XP_001653368.1| hypothetical protein AaeL_AAEL008623 [Aedes aegypti]
 gi|108875363|gb|EAT39588.1| conserved hypothetical protein [Aedes aegypti]
          Length = 225

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 14/186 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGV 127
           + +EP  ++ L +  AL   L  I+       +++G G+G V   +A    S     +GV
Sbjct: 15  NVYEPAEDSFL-LLDALEDELDAIKLLQPAMCVEIGPGSGIVISAIAKALHSSGSYCMGV 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           DI+  A  + +   + N    R + +  D    + +G  D++V NPPY+ +   D   LE
Sbjct: 74  DINPHACRMTQRTGLLNDC--RLEVVNMDLLGGLADGCVDLLVFNPPYVPTAEEDSRELE 131

Query: 187 VRDFDPRI-------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRI 238
            +  + R        S  GG DG+     +   + R L++ G+   + +  N+ ++V+  
Sbjct: 132 EQIGEFREDGHNLVKSWAGGFDGMVVTNRLLKDLDRILSERGVFYLLLLKENKPMEVINC 191

Query: 239 FESRKL 244
                 
Sbjct: 192 LGKNGF 197


>gi|83319521|ref|YP_424011.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283407|gb|ABC01339.1| N-6 adenine-specific DNA methylases, putative [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 220

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 20/171 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      +  +   +I D GT    + L +L +    K +GV+I  KA+EIA  N  
Sbjct: 7   DSVLVARFCNLNSKK-KKICDFGTNNAVIPL-ILSKYTKAKIIGVEIQNKAVEIANENIK 64

Query: 143 TNGVSERFDTLQSDW--FSSVEGL-FDVIVSNPPYIE---SVIVDCLGLEVRD--FDPRI 194
            NG+ ++ + + +D   FS +    FD++V NPP+ +   +  +  + LEV +   +  I
Sbjct: 65  LNGLEDQIEIVHADIKEFSKLHNQEFDLVVCNPPFFKMDGNPKLKEISLEVANARHEILI 124

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +L            I    SR L   G  ++     +  +++ +F    ++
Sbjct: 125 TL----------EDIIKSASRCLKNKGNFTIVHRSERLSEIINLFYKYNIY 165


>gi|296420792|ref|XP_002839952.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636160|emb|CAZ84143.1| unnamed protein product [Tuber melanosporum]
          Length = 228

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 26/198 (13%)

Query: 70  DTFEPRPETELLVDS-ALA--FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
             +EP  +T LL+D+ AL   F   R  +  +   L+LG+G+G +   L   S    G  
Sbjct: 14  HIYEPSEDTFLLLDTLALQSPFLRSRFPQTSLPLALELGSGSGVITSFLTTHSATLFGHT 73

Query: 127 ------VDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSV-EGLFDVIVSNPPYIE 176
                  DIS  A +  K     N   E    L   ++D  + +  G+ D++V NPPY+ 
Sbjct: 74  SITTLSTDISPHAPDATKQTVSANITEESGCFLGAIRTDLATGLRPGVVDMLVFNPPYVP 133

Query: 177 SVIVDCLGLEVRDFDPRI--SLDGGIDGLSHYRTIADGVSRHLNKDGL---CSVEIGYNQ 231
           + +V+    E    +  I  +  GG+DG+     +  G+   L++ G+      E   N+
Sbjct: 134 TEVVEDGNGE----EGWIGVACGGGVDGMEVTIRVLKGLKECLSESGVAYILLCE--RNK 187

Query: 232 KVDVVRIFE--SRKLFLV 247
              V          +  +
Sbjct: 188 PEAVAEQLRNGEYGVKWI 205


>gi|261866895|ref|YP_003254817.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412227|gb|ACX81598.1| phosphatidylserine synthase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 232

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 24/165 (14%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   +ILDLG G+G + L L +  S   +   V+I   A + A+ N   +   ++ 
Sbjct: 29  WANVTQAKQILDLGCGSGLIALMLAQRSSAESRICAVEIDPAAAQQAQENVSASPWKDKI 88

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q +     +  +  FD+IV+NPPY ++ +      E R+    ++    +  L    
Sbjct: 89  QVYQQNIETFCAQSKHAFDLIVANPPYFQTGV--DCRNEARNTARYLASQSHLHWL---- 142

Query: 208 TIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVN 248
              +  +  L   G  S     E G         + ++  L+ V 
Sbjct: 143 ---ETAASCLASKGKISFVLPLEAGET-------LLKTTALYCVE 177


>gi|114561726|ref|YP_749239.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella frigidimarina
           NCIMB 400]
 gi|122300833|sp|Q088B4|RSMC_SHEFN RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|114333019|gb|ABI70401.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella frigidimarina
           NCIMB 400]
          Length = 345

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +      R+LD G G G +  ALLK +P      +DI+  AL   +    
Sbjct: 191 DQGTDLLLSHLPDNLRGRVLDFGCGAGVITAALLKANPELTIECIDINAMALLSCELTLA 250

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            N +  +     SD F+ + G FD I+SNPP+ +
Sbjct: 251 ANSMQAKV--YPSDGFNQITGKFDGIISNPPFHD 282


>gi|218134398|ref|ZP_03463202.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989783|gb|EEC55794.1| hypothetical protein BACPEC_02301 [Bacteroides pectinophilus ATCC
           43243]
          Length = 254

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 28/187 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   L  +   F    +  LL + A+          +    +DL TG G + + +  ++ 
Sbjct: 20  HGRMLIQNKSMFCFGIDAVLLANYAVV--------NEGDVCMDLCTGNGIIPVLMEAKTK 71

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE 176
                G++I  ++ E+A+ +   N  ++R D +  D  ++V     G FDV+  NPPY+ 
Sbjct: 72  GKHYTGLEIQKESAELARKSVELNNTADRIDIVNDDLKNAVALYKRGRFDVVTVNPPYMN 131

Query: 177 SV---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                +       +   +   +L            I    S  L   G   +     +  
Sbjct: 132 ENHGIVNPSSPKAIARHEICCTL----------EDIISTSSALLRDKGRFYMVH---RPQ 178

Query: 234 DVVRIFE 240
            +V+IFE
Sbjct: 179 RLVQIFE 185


>gi|170289516|ref|YP_001739754.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
 gi|226710126|sp|B1L841|PRMA_THESQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|170177019|gb|ACB10071.1| ribosomal L11 methyltransferase [Thermotoga sp. RQ2]
          Length = 264

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V        S
Sbjct: 128 KEGNTVLDVGCGTGILAIA-AKKLGASQVVAVDVDEQAVEVAEENVRKNDVDVLVKW--S 184

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S VEG FD++VSN
Sbjct: 185 DLLSDVEGTFDIVVSN 200


>gi|218778577|ref|YP_002429895.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
 gi|218759961|gb|ACL02427.1| methyltransferase small [Desulfatibacillum alkenivorans AK-01]
          Length = 251

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++      I+DLGTG G + L L    P  K  GV+I      +A+ N   NG+ +R   
Sbjct: 44  VQCGKDSLIVDLGTGAGVIPLILTSLYPDIKVYGVEIQDSLAGLAERNVRENGLQDRISV 103

Query: 153 LQSDWFSS----VEGLFDVIVSNPPY---IESVIVDCLGLEVRDFDPRISL--DGGIDGL 203
           ++ D   S    +    D +VSNPPY       I           +   +L    G    
Sbjct: 104 IRHDLKKSPIQGLPKNIDYVVSNPPYRRLGSGRINPDSQKAAARHEILANLEDTAGA--- 160

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                     +R L K G  +V
Sbjct: 161 ---------AARLLGKGGRFAV 173


>gi|160893394|ref|ZP_02074180.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50]
 gi|156864969|gb|EDO58400.1| hypothetical protein CLOL250_00944 [Clostridium sp. L2-50]
          Length = 251

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP- 120
             ++  + + F    +  LL +          + R     +DLGTGTG + + L  + P 
Sbjct: 17  GYQIIQNPNMFCFGMDAVLLANFV--------KHRRDGMYMDLGTGTGVIPILLAAKEPP 68

Query: 121 --FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPY 174
               + VG++I     E+A  +   N + ++      D         +  FD++ SNPPY
Sbjct: 69  DGTCQFVGLEIQDACAEMAGKSVRLNDLEQKVRIDHGDIREVSCNYRKASFDIVTSNPPY 128

Query: 175 IESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           I          E ++    +  ++L    D       + +  +  L   G   +     +
Sbjct: 129 ISGNHGLTNPDEPKNIARHEICVTL---SD-------VIEAAAYLLKPGGSFYMIH---K 175

Query: 232 KVDVVRIFE 240
              +  IFE
Sbjct: 176 PFRLAEIFE 184


>gi|269126609|ref|YP_003299979.1| methyltransferase small [Thermomonospora curvata DSM 43183]
 gi|268311567|gb|ACY97941.1| methyltransferase small [Thermomonospora curvata DSM 43183]
          Length = 228

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 12/115 (10%)

Query: 62  NVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++RLT     F P    P T +L+++  A             +LD+G G G + LA+   
Sbjct: 44  HLRLTTDRGVFSPDRIDPGTRILLETVPA-------PPAEGDLLDVGCGYGPIALAMALR 96

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           SP  +  GVD++ +AL++A+ NA T G+       + +        F  + SNPP
Sbjct: 97  SPRARVYGVDVNERALQLARLNARTAGIG-NASFHRPEQIDP-AMRFAALWSNPP 149


>gi|260494056|ref|ZP_05814187.1| methyltransferase [Fusobacterium sp. 3_1_33]
 gi|260198202|gb|EEW95718.1| methyltransferase [Fusobacterium sp. 3_1_33]
          Length = 243

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +           +++  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIVQRSDYFNFSIDSLLISEFIKI-------QKNTKKILDLGTGNAAIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE- 176
            K  G++I   + ++A  N   N + E+   +  +  + ++    G FD+IVSNPP+ + 
Sbjct: 67  AKIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFKV 126

Query: 177 SVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           +  ++ L     L +   +  I+L            +    S  +   G   +    ++ 
Sbjct: 127 NRDINFLNNLKQLSIARHEIEITL----------EELIKISSELIKDRGYFYLVHRSDRL 176

Query: 233 VDVVRIFESRKL 244
            +++ I E  K 
Sbjct: 177 SEILCILEKYKF 188


>gi|170029884|ref|XP_001842821.1| HemK methyltransferase family member 2 [Culex quinquefasciatus]
 gi|167864803|gb|EDS28186.1| HemK methyltransferase family member 2 [Culex quinquefasciatus]
          Length = 222

 Score = 77.1 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 15/166 (9%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDI 129
            +EP  ++ L +  AL   L  I     +  L++G G+G +  AL K        +GVDI
Sbjct: 16  VYEPAEDSFL-LLDALEDELEAIRALRPLVCLEIGPGSGIIISALAKVLANGALFLGVDI 74

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           + KA  +       N      D +  D     V G+ D++V NPPY+ +   DC   E+ 
Sbjct: 75  NPKACRMTARTREMNECP--VDVVNMDLVGGFVPGVVDLLVFNPPYVPTSEEDC-PKELE 131

Query: 189 DF-----DPRISLD----GGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +      +    L     GG DG++    +   + R L+ +G+   
Sbjct: 132 EHIGQFGEGLHDLVKSWAGGCDGMAVTNRVLATLDRILSPEGVFYC 177


>gi|294656503|ref|XP_458775.2| DEHA2D07216p [Debaryomyces hansenii CBS767]
 gi|199431521|emb|CAG86919.2| DEHA2D07216p [Debaryomyces hansenii]
          Length = 225

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 29/202 (14%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--DLGTGTGAVCLALLKE-SPFFKGVG 126
           + +EP  ++ LL+D          E+      L  ++GTG+G V   + +   P    + 
Sbjct: 14  NVYEPAEDSFLLLDCLEEQCSFITERFRSRVPLVTEIGTGSGIVTTFIQQNILPQSMFIT 73

Query: 127 VDISCKALEIAKSNAVTNGVSER-------FDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
            DI+  A +        N +  +        D+ Q +  + + +G  D++V NPPY+ + 
Sbjct: 74  TDINPHACKTVLQTDKDNNIDSKDTKEPYVLDSCQMNLTTGIRQGTIDMLVFNPPYVPAF 133

Query: 179 IVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-------- 228
            +  +    E + +   ++L GG DG+     + + +   L        EIG        
Sbjct: 134 ELPNIPTAEEDKTWL-DLALLGGEDGMVVTWRLLNELDSILTP------EIGVAYILFCA 186

Query: 229 YNQKVDVVRIFESRKLFLVNAF 250
            N+  +V +I + +    V   
Sbjct: 187 RNKPKEVAKIMQEKGW-DVETI 207


>gi|90021563|ref|YP_527390.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans
           2-40]
 gi|89951163|gb|ABD81178.1| 16S rRNA m(2)G 1207 methyltransferase [Saccharophagus degradans
           2-40]
          Length = 361

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 20/153 (13%)

Query: 28  SVLDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
           + LD      L   AI   L  +S   + GW+ F                  +L     +
Sbjct: 168 TPLDSSNYNALREVAICCDLPMQSKPGVYGWKKF------------------DLATQQLI 209

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF   R        +LDLG G+G + +A+ K          D +  A+   + N +TN +
Sbjct: 210 AFIKQRYNNLKEHTVLDLGCGSGYLSIAV-KTLHCRSLTATDNNAAAVLATQQNLITNNL 268

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           +E    +  D   S++G+FD++V NPP+ +   
Sbjct: 269 AEAAQVVADDCAQSIQGMFDLVVCNPPFHKGFE 301


>gi|302206342|gb|ADL10684.1| Putative methyltransferase [Corynebacterium pseudotuberculosis
           C231]
 gi|308276584|gb|ADO26483.1| Putative methyltransferase [Corynebacterium pseudotuberculosis I19]
          Length = 508

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISC 131
            P  +  L + +A    L    +  V  +LDLG+G+G   L      P     +  DI  
Sbjct: 132 IPGKDHVLGIGAASLSLLSATPRTPVHTLLDLGSGSGIQALGQA---PHAHTIIATDIHD 188

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +AL+ A++N+  N V    +     WF  V G  FD IV+NPP++          E+   
Sbjct: 189 RALDFAEANSAANKVP--LEIRSGSWFDPVAGEKFDRIVANPPFVVG------PPEIG-- 238

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              +  D G+D       +      HL + G  
Sbjct: 239 --HVYRDSGLDLDGATEYVVRKGIDHLKEQGCL 269


>gi|253987968|ref|YP_003039324.1| 16S ribosomal RNA m2G1207 methyltransferase [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253779418|emb|CAQ82579.1| ribosomal rna small subunit methyltransferase c (rrna (guanine-n2-)
           methyltransferase) (16s rrna m2g1207 methyltransferase)
           [Photorhabdus asymbiotica]
          Length = 341

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 23/135 (17%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   +K     +LD+  G G +   L K++P       D++  A+  +K+    N +  
Sbjct: 188 LLSTFDKPLSGNLLDIACGAGVLAAVLGKKNPELALTLSDVNSAAIASSKATLKANKLEG 247

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           +     S+ +S++E  FD I+SNPP+ E +              R SL    D       
Sbjct: 248 KVVV--SNVYSNIEDKFDWIISNPPFHEGL--------------RTSLLAADD------- 284

Query: 209 IADGVSRHLNKDGLC 223
           +      +L   G  
Sbjct: 285 LIRQAPSYLKPGGKL 299


>gi|241763266|ref|ZP_04761323.1| methyltransferase small [Acidovorax delafieldii 2AN]
 gi|241367541|gb|EER61828.1| methyltransferase small [Acidovorax delafieldii 2AN]
          Length = 382

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 61/186 (32%), Gaps = 26/186 (13%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD   A  LP           D+GTGTG +  ALL        V
Sbjct: 177 RIHPHYGVFSPVRGEYVDLVAAAPLPSAALA-----FDIGTGTGVLA-ALLVRRGVQHVV 230

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             +   +AL  A+ N     V  +    Q+D F    G   ++V NPP++ +     +  
Sbjct: 231 ATEQDPRALACARDNLQRLAVLPQVVLQQADLFP--VGRAPLVVCNPPWVPARPSSPIEH 288

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----EI-GYNQKVDVVRI 238
            V D           +G    R    G++ HL     G   +    E  G   +  ++  
Sbjct: 289 AVYD-----------EGSRMLRGFLSGLAAHLESGGEGWLILSDLAEHLGLRSREQLLGW 337

Query: 239 FESRKL 244
                L
Sbjct: 338 VAEAGL 343


>gi|297201351|ref|ZP_06918748.1| transferase [Streptomyces sviceus ATCC 29083]
 gi|197712785|gb|EDY56819.1| transferase [Streptomyces sviceus ATCC 29083]
          Length = 508

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 16/139 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +   +    D++ +AL I       +G     D  +
Sbjct: 166 RTPVGSALDLGTGSGIQALHAAQHA--TRVTATDLNPRALHITALTLALSGAPA-ADLRE 222

Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  V+    +D+IVSNPP++ S                   DGG+ G    R++  G
Sbjct: 223 GSLFEPVKQGETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRSVVQG 271

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
               LN+ G       +  
Sbjct: 272 AGELLNEGGFAQFLANWQH 290


>gi|331674025|ref|ZP_08374788.1| hypothetical protein ECNG_00610 [Escherichia coli TA280]
 gi|331069298|gb|EGI40690.1| hypothetical protein ECNG_00610 [Escherichia coli TA280]
          Length = 285

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  ++R 
Sbjct: 79  WAPVARVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAKRI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY    V       E   +    +LD        +
Sbjct: 139 NVHTADIQQWIAQQTVRFDLIISNPPYYQPGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 QSLLACAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|149182681|ref|ZP_01861148.1| hypothetical protein BSG1_10608 [Bacillus sp. SG-1]
 gi|148849591|gb|EDL63774.1| hypothetical protein BSG1_10608 [Bacillus sp. SG-1]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 70/210 (33%), Gaps = 30/210 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L  +   I KR   +I+DL +G 
Sbjct: 8   ERLDYLLAE----NLRIIQSPSVFSFS------LDAVLLANFASIPKRKG-KIIDLCSGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G + L L          GV+I  +  E+A  +   N +  +   +  D            
Sbjct: 57  GVIPLML-SNRTSVPITGVEIQERLFEMANRSIEYNKLGNQISMIHGDIKDMPARFGNDK 115

Query: 165 FDVIVSNPPYIESVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           FD +  NPPY      + +       +   +   +L            +   V   L + 
Sbjct: 116 FDAVTCNPPYFSKGEKEKINSNEHYAIARHELLCTL----------EDVVKAVGLLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           G  S      + VD++ +    ++      
Sbjct: 166 GKASFVHRPGRGVDLLTLMREYRIEPKRIR 195


>gi|15668216|ref|NP_247009.1| hypothetical protein MJ_0046 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2495762|sp|Q60354|Y046_METJA RecName: Full=Putative methyltransferase MJ0046
 gi|1590844|gb|AAB98026.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 261

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 69/177 (38%), Gaps = 14/177 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +++ +    +   P P    L   +   +L  +   +   +L++GTG  A+   L+K
Sbjct: 46  KVLFDLDIEFHKNGLIPTPINRYLFIKSTFETLKEL-GIEKPTVLEIGTGHSAIISLLIK 104

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
           +    +    ++  + ++ AK N   N +  +    +      +E      FD+I+S PP
Sbjct: 105 KFYNAEVYATEVDEEFIDFAKRNIEKNKLDIKIINSKGRAIEGIEELKDKKFDLIISYPP 164

Query: 174 YIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     V       R F   ++     + GG  G      I +     LNK G+ S+
Sbjct: 165 FYSKNSVASG----RKFGGALAKNVELIGGGKFGEEFSFKIIEEGINFLNKKGVISL 217


>gi|309807575|ref|ZP_07701527.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 01V1-a]
 gi|308169181|gb|EFO71247.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 01V1-a]
          Length = 289

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 155 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 212

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   +S HL ++
Sbjct: 213 VKGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 243

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 244 GSVIMSGIDCEQLSRIEKLLSENGFT 269


>gi|302191264|ref|ZP_07267518.1| ribosomal protein L11 methyltransferase [Lactobacillus iners AB-1]
 gi|309803236|ref|ZP_07697333.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 11V1-d]
 gi|309806611|ref|ZP_07700608.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 03V1-b]
 gi|312871729|ref|ZP_07731817.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           3008A-a]
 gi|312872912|ref|ZP_07732972.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2062A-h1]
 gi|312874259|ref|ZP_07734293.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2052A-d]
 gi|329920140|ref|ZP_08276971.1| ribosomal protein L11 methyltransferase [Lactobacillus iners SPIN
           1401G]
 gi|308164744|gb|EFO66994.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 11V1-d]
 gi|308167031|gb|EFO69213.1| ribosomal protein L11 methyltransferase [Lactobacillus iners
           LactinV 03V1-b]
 gi|311090329|gb|EFQ48739.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2052A-d]
 gi|311091434|gb|EFQ49818.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092671|gb|EFQ51027.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           3008A-a]
 gi|328936594|gb|EGG33038.1| ribosomal protein L11 methyltransferase [Lactobacillus iners SPIN
           1401G]
          Length = 310

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   +S HL ++
Sbjct: 234 VKGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GSVIMSGIDCEQLSRIEKLLSENGFT 290


>gi|259500573|ref|ZP_05743475.1| ribosomal protein L11 methyltransferase [Lactobacillus iners DSM
           13335]
 gi|259167957|gb|EEW52452.1| ribosomal protein L11 methyltransferase [Lactobacillus iners DSM
           13335]
          Length = 302

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 168 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 225

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   +S HL ++
Sbjct: 226 VKGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 256

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 257 GSVIMSGIDCEQLSRIEKLLSENGFT 282


>gi|257437590|ref|ZP_05613345.1| ribosomal protein L11 methyltransferase [Faecalibacterium
           prausnitzii A2-165]
 gi|257199897|gb|EEU98181.1| ribosomal protein L11 methyltransferase [Faecalibacterium
           prausnitzii A2-165]
          Length = 304

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 19/134 (14%)

Query: 56  GWRDFYNV-----RLTLSSDTFEPRPETELLV-DSALAFSLPRIEK------------RD 97
           GWR +Y+      RL +     E   +   L+ D  LAF     E             R 
Sbjct: 108 GWRKYYHPMDIGKRLAIVPSWQEYDTDRVKLILDPGLAFGTGGHETTSLCLEALDERVRG 167

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A LK        GVDI   A+  A  NA  NGV+++   L  D 
Sbjct: 168 GERVLDIGTGSGILAIAALKLGAGS-AEGVDIDPVAVRTAGENAALNGVADKLTVLVGDL 226

Query: 158 FSSVEGLFDVIVSN 171
                G +D+I +N
Sbjct: 227 SDKASGRYDIITAN 240


>gi|217977297|ref|YP_002361444.1| methyltransferase small [Methylocella silvestris BL2]
 gi|217502673|gb|ACK50082.1| methyltransferase small [Methylocella silvestris BL2]
          Length = 257

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 24/161 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G GA  +AL    P  +   V+I  +A E+A+ N   NG+++R    ++D  S 
Sbjct: 50  VLDIGAGVGAASIALAATRPGARIGLVEIDAEAAELARKNLDLNGIAQRGRVFEADALSP 109

Query: 161 V--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD---GGIDGLSHYRTI 209
                    +   D+++SNPP+++         E R    R +     GG  G      +
Sbjct: 110 PSRRAAGLADETADLVISNPPFLDPARSRASPDEGR----RRAHVMREGGPAG------V 159

Query: 210 ADGVSRHL---NKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              ++  L      G C V    +    ++   E R    V
Sbjct: 160 VAWLAACLALTRPGGSCIVIHRPDSLAALLASLEGRAGEAV 200


>gi|24379094|ref|NP_721049.1| hypothetical protein SMU.621c [Streptococcus mutans UA159]
 gi|24376995|gb|AAN58355.1|AE014906_1 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 339

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FAATRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V++  +  ++A+ +   N ++ +   ++ D  + ++       D+I+ NPPY ++
Sbjct: 70  AKIIEVELQERLADMAQRSIQLNDLTNQVSMIRDDLKNLLDHVPRSKVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I     + L  +G  ++    ++ +
Sbjct: 130 AETSKKNLSEHYLLARHEIATNL----------EEICKISQQVLKTNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++  F+  KL
Sbjct: 180 EIIDTFKKYKL 190


>gi|251794055|ref|YP_003008786.1| methyltransferase small [Paenibacillus sp. JDR-2]
 gi|247541681|gb|ACS98699.1| methyltransferase small [Paenibacillus sp. JDR-2]
          Length = 231

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 26/195 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +  S + F         +D+ L      I KR   RILDL TG G +   LL     
Sbjct: 20  GLHIIQSREVFSFS------LDAVLLSKFATIPKRG--RILDLCTGNGVIP-MLLTTRTD 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIES 177
            +   V+I  +  ++A+ +   N +SE+   ++ D       +  G++D +  NPPY+  
Sbjct: 71  ARIDAVEIQPRLADMARRSVAMNNLSEQVSIIEGDLKIFMKEAGNGIYDAVTVNPPYMAV 130

Query: 178 VIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              D    +   +   +   +LD           +    +R +   G  ++    ++ +D
Sbjct: 131 KAGDSNENDHYAIARHEIHCTLD----------DVVHACARLVRSGGKVAMVHRPSRFID 180

Query: 235 VVRIFESRKLFLVNA 249
           ++      +L     
Sbjct: 181 IMETMRKYRLEPKRV 195


>gi|238761895|ref|ZP_04622869.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           kristensenii ATCC 33638]
 gi|238700009|gb|EEP92752.1| Ribosomal RNA small subunit methyltransferase C [Yersinia
           kristensenii ATCC 33638]
          Length = 347

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS     L    +     ILD+G G G +   L  + P  K    D+S  A+E +++   
Sbjct: 182 DSGSYLLLSTFSEPFKGSILDVGCGAGVLASVLAPKMPKIKWTLSDVSAAAIESSRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  +   + S+ +S ++G F++I+SNPP+                      DG    
Sbjct: 242 ANNIDAQV--IASNVYSDIKGRFEMIISNPPFH---------------------DGIQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L+    +  G + HL+  G  
Sbjct: 279 LTAAELLIRGATAHLHVGGKL 299


>gi|169629596|ref|YP_001703245.1| putative methyltransferase [Mycobacterium abscessus ATCC 19977]
 gi|169241563|emb|CAM62591.1| Putative methyltransferase [Mycobacterium abscessus]
          Length = 201

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 13/140 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R      +R+ DL TG+G + LA   +        +D+   A+E A+SNA   G      
Sbjct: 3   RFFPPAGLRVADLCTGSGYLALA-AAKEGAAAVTALDMCPLAVECAQSNAQRVGAD--IT 59

Query: 152 TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPR-----ISLDGGIDGLSH 205
            LQ DW  + E G FD++++NPPY+       LG  V    P      ++   G+ G   
Sbjct: 60  ALQGDWLRAKEFGPFDLVLANPPYVPGDRRVLLGDAV----PASVGTTLAFHAGVSGRLV 115

Query: 206 YRTIADGVSRHLNKDGLCSV 225
              +       L+  G+  +
Sbjct: 116 LDPLCTHAHELLDPHGVLLL 135


>gi|332158423|ref|YP_004423702.1| SAM-dependent methyltransferase, putative [Pyrococcus sp. NA2]
 gi|331033886|gb|AEC51698.1| SAM-dependent methyltransferase, putative [Pyrococcus sp. NA2]
          Length = 250

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 75/217 (34%), Gaps = 26/217 (11%)

Query: 15  TGLS-SHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            GL     V + P+    +DDR R   +N   R L +++I      +  + + +      
Sbjct: 9   LGLPIREAVKIFPELSRYIDDRGRLDFSNREARILYNKAIA-----KALFGLEIEYHPRG 63

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
               P +         +   +   R   R+L++GTG  A+   + ++         +I  
Sbjct: 64  LVTTPISR--------YIFLKTFLRGGERVLEIGTGHTALMALMAEKFFDCNVTATEIDE 115

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +    A  N + N  + +           V      FDVI S PPY E      L     
Sbjct: 116 EFYSYALKNILRNNANVKLIKSNGGIIRGVIPEGEKFDVIFSAPPYYEKHAGGVLTE--- 172

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               R ++ GG  G      I +    +L + G  ++
Sbjct: 173 ----REAMGGGEFGEEFSIRILEEARDYLRERGKVAL 205


>gi|237744391|ref|ZP_04574872.1| methyltransferase [Fusobacterium sp. 7_1]
 gi|229431620|gb|EEO41832.1| methyltransferase [Fusobacterium sp. 7_1]
          Length = 243

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +           +++  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIVQRSDYFNFSIDSLLISEFIKI-------QKNTKKILDLGTGNAAIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE- 176
            K  G++I   + ++A  N   N + E+   +  +  + ++    G FD+IVSNPP+ + 
Sbjct: 67  AKIYGIEIQEVSYKLALRNININNLDEQIYIIYDNMKNYLKYFNMGFFDIIVSNPPFFKV 126

Query: 177 SVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           +  V+ L     L +   +  I+L            +    S  +   G   +    ++ 
Sbjct: 127 NRDVNFLNNLKQLSIARHEIEITL----------EELIKISSELIKDRGYFYLVHRADRL 176

Query: 233 VDVVRIFESRKL 244
            +++ I E  K 
Sbjct: 177 SEILCILEKYKF 188


>gi|227329779|ref|ZP_03833803.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 349

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W D Y    V +      F  R +    +D      L   E     ++LD+  G G +  
Sbjct: 158 WWDEYVTDGVTVKTLPGVFS-RDD----LDPGSRLLLSTFEPHMKGKVLDIACGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K+SP  +    D+S  A+E +K+    N +      + S+ +S ++G FD+IVSNPP
Sbjct: 213 VLAKQSPKIRLTLSDVSAAAVESSKATLAANALEG--SVIASNVYSDIDGRFDMIVSNPP 270

Query: 174 YIESVIVDCLGLE 186
           + + +       E
Sbjct: 271 FHDGLQTSLQAAE 283


>gi|254303277|ref|ZP_04970635.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323469|gb|EDK88719.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 223

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQDSLNKKNIKLLDIGTGNGILPILLSDNKFLTELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FD+I+SNPPY++         E R  
Sbjct: 79  ENIDRANKALELNKIEKNIQFECIDIREYKNSNYFDIIISNPPYMDDNGKKINENEHRAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + +++L                  R L   G        ++ V++++  +     + 
Sbjct: 139 SRHEIKLNLS----------EFISNAKRLLKPIGSLYFIHRTHRLVEIIKNLDKNNFSIK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|167752001|ref|ZP_02424128.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216]
 gi|167660242|gb|EDS04372.1| hypothetical protein ALIPUT_00243 [Alistipes putredinis DSM 17216]
          Length = 232

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 18/168 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   +  +  D    R   ++  D  L  +   +   D  R+LD+GTGTG + L L + S
Sbjct: 2   FRFKQFAVRQD----RCPMKVGTDGVLLGAWAEVRPGDR-RMLDVGTGTGLIALMLAQRS 56

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIES 177
             +    VDI  +    A  N   +  ++R D +      +  VE  FD+IVSNPPY   
Sbjct: 57  AAW-ITAVDIDVECATQAAENFAASPWADRLDAVSVAVQRYDPVE-KFDLIVSNPPYYVD 114

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            ++     E R+     +      GL     +A  V R L+  G  ++
Sbjct: 115 SLLS--PDEGRNTARHAA------GLPFGE-LAAAVVRLLSPGGRFAL 153


>gi|332361710|gb|EGJ39514.1| methyltransferase [Streptococcus sanguinis SK1056]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +  +       D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGQYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L  G         I     R L  +G  ++     + +
Sbjct: 130 DKKSNLNESQHYLLARHEISTNL--GE--------ICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|296271470|ref|YP_003654102.1| methyltransferase small [Thermobispora bispora DSM 43833]
 gi|296094257|gb|ADG90209.1| methyltransferase small [Thermobispora bispora DSM 43833]
          Length = 490

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 24/169 (14%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
             V R LDLGTG+G   L L   +   + V  D++ +AL +A+     +GV E  D  Q 
Sbjct: 148 GPVGRALDLGTGSGVQVLHLAGRA--SEIVATDVNPRALCLARLTWALSGVGE-VDARQG 204

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             +  V +  FD+IV+NPP++ S        E            G       R +     
Sbjct: 205 SMYDPVADERFDLIVANPPFVISPTARYAYRE-----------SGRQADEFCRDLVRLAP 253

Query: 215 RHLNKDGLCSVEI------GYNQKVDVVRIFESR---KLFLVNAFKDYG 254
           RHL   G            G + +  V    E        +    +D  
Sbjct: 254 RHLEPGGHARFLANWLHLRGEDWRDRVGGWLEESGCDGWAVQRVVRDPA 302


>gi|261820511|ref|YP_003258617.1| methyltransferase small [Pectobacterium wasabiae WPP163]
 gi|261604524|gb|ACX87010.1| methyltransferase small [Pectobacterium wasabiae WPP163]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 15/159 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+G+G+G + L L + S P  +   V++   A + AK N   +  ++R 
Sbjct: 42  WAPVSSTSRILDIGSGSGLLALMLAQRSEPHVRVDAVELDSAASQQAKENMAASPWADRV 101

Query: 151 DTLQSDW--FSSVEGL-FDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
                D   F+++    + +IVSNPPY    I       E   +   ++          +
Sbjct: 102 TVYAEDIVDFAAMRSTDYSLIVSNPPYFPPGIACGSAEREQARYTTSLT----------H 151

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             +     + L  +GL  V +        + + +    +
Sbjct: 152 EALLHCAHQLLMPEGLFCVVLPVQVAEHFIPLAQQHNWY 190


>gi|170728465|ref|YP_001762491.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|226712994|sp|B1KHR8|RSMC_SHEWM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169813812|gb|ACA88396.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 345

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 35/140 (25%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LPR+ +    R+LD G G G +  ALLK  P  +   VDI+  AL+  +     N 
Sbjct: 195 LLSHLPRLSR----RVLDFGCGAGVIAAALLKAQPELEIECVDINAMALKSCELTLEANN 250

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-- 203
            + +     SD  S  +G FD I+SNPP+                          DGL  
Sbjct: 251 FTAKV--YASDGLSQTQGHFDDIISNPPF-------------------------HDGLKS 283

Query: 204 --SHYRTIADGVSRHLNKDG 221
                ++     ++ L   G
Sbjct: 284 TTDIAKSFVKESAQKLKSGG 303


>gi|283797151|ref|ZP_06346304.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
 gi|291075568|gb|EFE12932.1| putative N-6 adenine-specific DNA methylase [Clostridium sp. M62/1]
          Length = 250

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 69/190 (36%), Gaps = 25/190 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+  +   F    +  LL              +   R LDLGTGTG + + L  ++  
Sbjct: 23  GYRIIQNQKAFCFGMDAVLL--------SGYASVKPGERALDLGTGTGIIPILLEAKTEG 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G++I     E+A+ +   NG+  + + +  D   +        FDV+ SNPPY+  
Sbjct: 75  SYFAGLEIQENMAEMARRSVWLNGLEGKIEIVTGDIKEAGRIFGAASFDVVTSNPPYMND 134

Query: 178 V---IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   L   +   +   +L            +    ++ L   G   +    ++ ++
Sbjct: 135 SHGLKNPDLPKAIARHEVLCTL----------EDVVREGAKVLRPGGRFYMVHRPHRLIE 184

Query: 235 VVRIFESRKL 244
           ++  F   KL
Sbjct: 185 IITAFTKYKL 194


>gi|315653592|ref|ZP_07906512.1| ribosomal protein L11 methyltransferase [Lactobacillus iners ATCC
           55195]
 gi|315488954|gb|EFU78596.1| ribosomal protein L11 methyltransferase [Lactobacillus iners ATCC
           55195]
          Length = 310

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +    K    DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASKVCATDISDDAIVSAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   ++ HL ++
Sbjct: 234 VKGKYDLILAN---------------------MLA--------EILYQLIPHLADHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GSVIMSGIDCEQLSRIEKLLSENGFT 290


>gi|115372133|ref|ZP_01459444.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1]
 gi|310818836|ref|YP_003951194.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|115370835|gb|EAU69759.1| methyltransferase small [Stigmatella aurantiaca DW4/3-1]
 gi|309391908|gb|ADO69367.1| Methyltransferase [Stigmatella aurantiaca DW4/3-1]
          Length = 321

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 20/167 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             ++   TL  D+    P+T        A  L R+  +   R +DLG G+GA  L++   
Sbjct: 111 YLHDAYPTLGEDSVFFGPDTY-----RFAALLARVPGK-FQRAVDLGCGSGAGGLSMGAR 164

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                 V  D+S +AL  ++ NA  N  + + + L SD    + G  D++++NPPY+   
Sbjct: 165 VGSL--VLSDVSTRALRFSRINAALNE-APQVEFLASDGLRGIPGGVDLVMANPPYL--- 218

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            VD      R         GG  G+             L+  G   +
Sbjct: 219 -VDERSRTYRH-------GGGSYGIELSVRFTREALERLSPGGTFVL 257


>gi|150015720|ref|YP_001307974.1| ribosomal protein L11 methyltransferase [Clostridium beijerinckii
           NCIMB 8052]
 gi|189037693|sp|A6LRN8|PRMA_CLOB8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|149902185|gb|ABR33018.1| ribosomal protein L11 methyltransferase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 314

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 30/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+G G+G + +A  K       VGVD+   A++ +K N   N +    + L+ 
Sbjct: 176 KPDTTVFDVGCGSGILAIAAAKLGAK-HVVGVDLDPVAVDSSKENISFNNL-NNIEVLEG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D++V+N   I + I+  L  +V+      +L+ G  GL     I      
Sbjct: 234 NLLDVVDGKADIVVAN---IIAEIICVLTEDVKK-----ALNEG--GLFITSGII----- 278

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
                        +++   V   F      ++   KD
Sbjct: 279 -------------HDRVDMVTEKFAECGFEVIEINKD 302


>gi|330831275|ref|YP_004394227.1| ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
           B565]
 gi|328806411|gb|AEB51610.1| Ribosomal RNA small subunit methyltransferase C [Aeromonas veronii
           B565]
          Length = 342

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 23/126 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G G G +   L K +P  +   VDIS  ALE ++     NG+  +     SD +S
Sbjct: 205 ELLDFGCGAGVIGSVLAKRNPELQVNMVDISALALESSRRTLAINGLQGKVTA--SDVYS 262

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +   F  IVSNPP+            ++ F             +            L  
Sbjct: 263 DLSTRFQHIVSNPPFHAG---------LKTF------------YAATEQFLAKAPEFLLP 301

Query: 220 DGLCSV 225
           +G  ++
Sbjct: 302 NGSLTI 307


>gi|294630601|ref|ZP_06709161.1| transferase [Streptomyces sp. e14]
 gi|292833934|gb|EFF92283.1| transferase [Streptomyces sp. e14]
          Length = 506

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LD+GTG+G   L   + +   +    D++ +AL I       +G     D  Q
Sbjct: 163 RRPVGSALDVGTGSGIQALHAGRHA--TRVTATDVNPRALHITALTLALSGAPA-ADLRQ 219

Query: 155 SDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  +     FD+IVSNPP++ S                   DGG+ G    RTI   
Sbjct: 220 GSLFEPLREGETFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTIVQQ 268

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               LN+ G       +    
Sbjct: 269 SGERLNEGGFAQFLANWQHVE 289


>gi|262037783|ref|ZP_06011225.1| methyltransferase [Leptotrichia goodfellowii F0264]
 gi|261748255|gb|EEY35652.1| methyltransferase [Leptotrichia goodfellowii F0264]
          Length = 243

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 15/167 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L     +I  R   ++LD+GTG G + + L  E    + VG+++  +  +IA+ N  
Sbjct: 32  DTVLLADFTKI-NRKTKKVLDIGTGCGIIPILLA-EKSKAEIVGIELQKEMADIAERNVQ 89

Query: 143 TNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLD 197
                ER + +  D   +  +     FD IV+NPPY E    ++ +     +  P++SL 
Sbjct: 90  NY--EERINIINDDIKNYQKIFKKDEFDCIVTNPPYFEFKGDINQI-----NNSPQMSLA 142

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                L+    I    +  L   G  S+     + V+++++    KL
Sbjct: 143 RHNIDLT-LEQIIKISAWLLKNSGHFSIVFRSERLVEMLKLLTENKL 188


>gi|172056821|ref|YP_001813281.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum
           255-15]
 gi|226710085|sp|B1YKT1|PRMA_EXIS2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|171989342|gb|ACB60264.1| ribosomal protein L11 methyltransferase [Exiguobacterium sibiricum
           255-15]
          Length = 315

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 55/218 (25%)

Query: 57  WRDFY-------NVRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ FY       ++ +    + + P+P+ ++ ++              + L         
Sbjct: 117 WKQFYKPVKISRHLTVVPMWEEYTPQPDEKI-IELDPGMAFGTGTHPTTVLCIQAIENYL 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  R++D+GTG+G + +A  K         +D+   A+  A  N   N VS++    Q 
Sbjct: 176 QDNDRVVDVGTGSGVLAIAAAKLGAK-DVFALDLDEVAVRSATDNVALNKVSQQVTVRQG 234

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    ++   ++IV+N                      ++               +    
Sbjct: 235 DLMKELKEPVELIVAN---------------------ILA--------EVILLFVNDAYE 265

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
                G       IG  +K  V     +    +V   K
Sbjct: 266 LTLPGGHFIASGIIG-QKKEMVRDAMVAAGFTIVETTK 302


>gi|327473346|gb|EGF18766.1| methyltransferase [Streptococcus sanguinis SK408]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +  +       D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGQYITGSRVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|324993353|gb|EGC25273.1| methyltransferase [Streptococcus sanguinis SK405]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|309810249|ref|ZP_07704094.1| ribosomal protein L11 methyltransferase [Lactobacillus iners SPIN
           2503V10-D]
 gi|308169521|gb|EFO71569.1| ribosomal protein L11 methyltransferase [Lactobacillus iners SPIN
           2503V10-D]
          Length = 310

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I++N                      ++             +   +S HL ++
Sbjct: 234 VKGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GSVIMSGIDCEQLSRIEKLLSKNGFT 290


>gi|146278503|ref|YP_001168662.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025]
 gi|145556744|gb|ABP71357.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17025]
          Length = 271

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 68/181 (37%), Gaps = 25/181 (13%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              +PR       D         +  R    +L+LG G G   L L    P  +  G+++
Sbjct: 36  RVLQPRRGYRAATDPVF--LAAAVPARPGQSVLELGCGAGVASLCLAARVPGLRLAGLEV 93

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIES-----VIVD 181
                E+A+ NA  NGVS   + ++ D  +    +   FD +++NPPY  +         
Sbjct: 94  QPAYAELARVNAARNGVS--LEVVEGDLAAMPPVLRRSFDHVIANPPYYPAGGGTGATDP 151

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                +R+  P         GL       +   R L   G+ S+  G ++  D +   ++
Sbjct: 152 GRERAMREDTPL--------GL-----WIEAAVRRLAPRGILSLIFGADRLPDALSALDA 198

Query: 242 R 242
           R
Sbjct: 199 R 199


>gi|327458711|gb|EGF05059.1| methyltransferase [Streptococcus sanguinis SK1057]
          Length = 248

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKKSNLNESQHYLLARHEISTNL----------EEICKIAQRILKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|300711088|ref|YP_003736902.1| methylase [Halalkalicoccus jeotgali B3]
 gi|299124771|gb|ADJ15110.1| methylase [Halalkalicoccus jeotgali B3]
          Length = 191

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 23/180 (12%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           + ++ +    ++ELL  +A               +LD GTG+G V + + K     + + 
Sbjct: 11  VETEVYGAAEDSELLAGAAADLV------GSGWTVLDCGTGSGHVGVRMRKA--GARVIA 62

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            D++  A E A+            + ++ D       G+FD +  NPPY+ +        
Sbjct: 63  SDLNPHACERARE--------AGLEAVRGDLLDPFRSGVFDAVAFNPPYLPTEPETEWDD 114

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKL 244
            +      ++L GG  G +      DGV R L  DG+  + +        V+     R  
Sbjct: 115 WM-----EVALSGGQSGRAVIEPFLDGVGRVLAPDGIALLLVSSLTGYESVLGYAGDRGF 169


>gi|237740004|ref|ZP_04570485.1| methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229422021|gb|EEO37068.1| methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 243

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 30/199 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +            ++  +ILD+GTG   + L L K +  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVNLT-------KNTKKILDIGTGNAVIPLFLSKRT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I   + ++A  N   N ++E+   +  +  + ++    G FD+++SNPP+ + 
Sbjct: 67  AKIYGVEIQEISYQLALRNISINNLNEQIYIIYDNIKNYLKYFTVGSFDIVLSNPPFFKV 126

Query: 178 VIVDCL-----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                L      L +   +  ++LD           + +  S+ +   G   +     + 
Sbjct: 127 TENKELLNDLEQLSIARHEIELNLD----------ELIEISSKLVKDRGYFYLVH---RA 173

Query: 233 VDVVRIFESRKLFLVNAFK 251
             +  I  + + +   A K
Sbjct: 174 DRLSEILVTLQKYNFEAKK 192


>gi|153812010|ref|ZP_01964678.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174]
 gi|149831909|gb|EDM86995.1| hypothetical protein RUMOBE_02403 [Ruminococcus obeum ATCC 29174]
          Length = 250

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I + +  ++LD+GTGTG +   L  +       G++I  +  ++A+ + 
Sbjct: 36  MDAVLLSGFADIRQNE--KVLDMGTGTGIIPFLLKAKDKGSHLTGLEIQEECADMARRSV 93

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N +    D +  D   + E      F  + SNPPY+     +    +   +   +   
Sbjct: 94  SYNHLEADIDIVCGDIKEAAEIFGAASFHAVTSNPPYMIGQHGLQNPYMAKAIARHEILC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L            +    +  L   G   +  
Sbjct: 154 TL----------EDVVSQAAAVLKDRGRFYMVH 176


>gi|144575414|gb|AAZ53764.2| DNA methylase [Mycoplasma hyopneumoniae 7448]
          Length = 256

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 76/174 (43%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + K+ + + L++GT  GA+ + +       +   ++I+  A+++A+ N 
Sbjct: 29  VDTILLGNFLTLSKK-IKKALEIGTNNGALAILVAHRKSLLEIDALEINENAIKVAQKNV 87

Query: 142 VTNGVSERFDTLQSDW--FSSVE-----GLFDVIVSNPPY--IESVIVDCLGLEVRD--F 190
             N    +   +  D+  F  +        +D+I +NPPY  I +  +  +  ++ +  +
Sbjct: 88  ELNKKGSQIRLIHMDFNHFWPLHNQKQMQKYDLIFANPPYFKIGTKKLKKVNSDLLNAIY 147

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  ++L            +  G S+ + + G  ++ +   + VD++ +      
Sbjct: 148 EFSLNLS----------QLISGASKIIQQKGKLALVLPIERFVDLIELLRENHF 191


>gi|72080729|ref|YP_287787.1| DNA methylase [Mycoplasma hyopneumoniae 7448]
          Length = 250

 Score = 76.7 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 76/174 (43%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + K+ + + L++GT  GA+ + +       +   ++I+  A+++A+ N 
Sbjct: 23  VDTILLGNFLTLSKK-IKKALEIGTNNGALAILVAHRKSLLEIDALEINENAIKVAQKNV 81

Query: 142 VTNGVSERFDTLQSDW--FSSVE-----GLFDVIVSNPPY--IESVIVDCLGLEVRD--F 190
             N    +   +  D+  F  +        +D+I +NPPY  I +  +  +  ++ +  +
Sbjct: 82  ELNKKGSQIRLIHMDFNHFWPLHNQKQMQKYDLIFANPPYFKIGTKKLKKVNSDLLNAIY 141

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  ++L            +  G S+ + + G  ++ +   + VD++ +      
Sbjct: 142 EFSLNLS----------QLISGASKIIQQKGKLALVLPIERFVDLIELLRENHF 185


>gi|148273201|ref|YP_001222762.1| hypothetical protein CMM_2020 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831131|emb|CAN02083.1| unnamed protein product [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 208

 Score = 76.7 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLK 117
           +     + + +      PE    VD      L  + +      +LD+G G G V L L  
Sbjct: 23  ELGGRTVDVETAGGVFSPEH---VDQGSLVLLHNVPEPPAEGHLLDVGCGWGPVALDLAM 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            SP      VD++ +AL + ++NA + G+      L  D  + +E  F  + SNPP    
Sbjct: 80  RSPAATVWAVDVNERALALTRANARSLGLENVNAVLPEDVPADLE--FAAVWSNPPI--R 135

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           V  + L   + D+ PR  L  G D     + 
Sbjct: 136 VGKEALHGILLDWMPR--LSPGADAWLVVQR 164


>gi|149911097|ref|ZP_01899724.1| Putative ribosomal RNA small subunit methyltransferase D
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           [Moritella sp. PE36]
 gi|149805847|gb|EDM65836.1| Putative ribosomal RNA small subunit methyltransferase D
           (rRNA(guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           [Moritella sp. PE36]
          Length = 375

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 24/139 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +  + K +   I+DLG G G + +   + +P  K   VD S  A+  AK NA  N  S  
Sbjct: 223 MQYLPKGEYQHIIDLGCGNGVIGITAARLNPQAKITFVDESFMAIASAKENAAANIASHE 282

Query: 150 FDT---LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            D    + +  +       D+++ NPP+ +   +             I+           
Sbjct: 283 QDVEFLVNNCLYDYEPHSVDLVLCNPPFHQEKAITD----------HIAW---------- 322

Query: 207 RTIADGVSRHLNKDGLCSV 225
             +     R L   G   +
Sbjct: 323 -QMFKDAHRALAWGGALYI 340


>gi|242371683|ref|ZP_04817257.1| methyltransferase [Staphylococcus epidermidis M23864:W1]
 gi|242350632|gb|EES42233.1| methyltransferase [Staphylococcus epidermidis M23864:W1]
          Length = 241

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 33/211 (15%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +E I  ++         +  + D F    +  LL            E R   RI+DL +G
Sbjct: 5   NERIDYLIKE----GYEIIQNDDVFSFSTDALLL--------GYLTEVRKNDRIMDLCSG 52

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---- 163
            G + L L  +       G++I  + +++A+ +   N + ER      D  +  +     
Sbjct: 53  NGVIPLLLAAKC-NQDIEGIEIQSQLVDMARRSFERNDLEERLTMHLMDLNNVYDTFKPS 111

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            + ++  NPPY ++  ++    E       + + +L                    L + 
Sbjct: 112 QYTLVTCNPPYFKTNQLNQHQKEAHKIARHEVKCNLA----------DCVKSARHLLKEG 161

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           G   +     +   ++ +    +   +   K
Sbjct: 162 GRLVLVH---RAERLMDVLNEMRNAKIEPKK 189


>gi|332362756|gb|EGJ40552.1| methyltransferase [Streptococcus sanguinis SK49]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|70606437|ref|YP_255307.1| hypothetical protein Saci_0622 [Sulfolobus acidocaldarius DSM 639]
 gi|68567085|gb|AAY80014.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 200

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 20/155 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+  +L L+ D + P  +TEL+++         I+ +D   +LD+G+GTG + L  LK  
Sbjct: 9   FHGYKLCLNDDVYIPAEDTELIMEM--------IKIKDGETVLDMGSGTGILSLHALKLG 60

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
              + + +D++  A +       +NG S     L       +    FDV + NPPY+   
Sbjct: 61  AK-RVLSIDVNPNAADATLCTLKSNGFSGNV--LNCYLLDCIRNTKFDVAIFNPPYLPFE 117

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D             S  GG  G+    +    V
Sbjct: 118 EYDNWLG--------YSWSGGKSGIDILLSFLSEV 144


>gi|332524046|ref|ZP_08400298.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315310|gb|EGJ28295.1| methyltransferase small domain protein [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 249

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    PR+  R +  I+DL +G GAV L     +  
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPRLPSRGL--IVDLCSGNGAVGL-FASRNTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            + V ++I  +  E+A+ +   N + ++   +  D  + ++ +     D+I+ NPPY +S
Sbjct: 70  AQIVEIEIQERLAEMAERSIKLNQLEKQVSIICDDLNNLLDHVPRSGVDLILCNPPYFKS 129

Query: 178 --VIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  +         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TKSSKKNISKHYLLARHEITTNL----------EEICSISRHALKSNGRLAMVHRPDRFI 179

Query: 234 DVVRIFESRKLFLVNA 249
           ++V   +   L     
Sbjct: 180 EIVDSLQKYGLAPKRV 195


>gi|313897519|ref|ZP_07831062.1| methyltransferase small domain protein [Clostridium sp. HGF2]
 gi|312957889|gb|EFR39514.1| methyltransferase small domain protein [Clostridium sp. HGF2]
          Length = 220

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 18/149 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+AL     +++K +  R+LD+GT  GA+ LA           G+DI  +A+ +A+ N  
Sbjct: 28  DTALLAQFMKVKKGE--RVLDIGTNNGALLLA-AHRYAPSYLYGIDIQPEAIAVAEKNME 84

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL----GLEVRDFDPRISLDG 198
            + ++     +  D   +     DVIV NPPY +      L     L++   +  ++L  
Sbjct: 85  HHHIT-NVVLMAQDICDAALEKVDVIVCNPPYFKVDQESNLNESQSLQMARHERFLTL-- 141

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   RT+   VS  L++ G   +  
Sbjct: 142 --------RTLCQRVSELLDEKGRFYMVH 162


>gi|319938777|ref|ZP_08013141.1| DNA methyltransferase signature protein [Streptococcus anginosus
           1_2_62CV]
 gi|319811827|gb|EFW08093.1| DNA methyltransferase signature protein [Streptococcus anginosus
           1_2_62CV]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P + KR +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPNLPKRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG++ +   +Q D       ++G   D+I+ NPPY + 
Sbjct: 70  AQIIAVEIQERLADMAERSIELNGLTHQMQVIQDDLKYLTHYIDGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DEHSNLNASRHYLLARHEIATNL----------EEICQISQRVLKSNGHLAIVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++    +  L
Sbjct: 180 DIIDTMIAHNL 190


>gi|319947370|ref|ZP_08021603.1| methyltransferase [Streptococcus australis ATCC 700641]
 gi|319746612|gb|EFV98872.1| methyltransferase [Streptococcus australis ATCC 700641]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 36/207 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         +DS L    P++  R +  I+DL  G GAV L        
Sbjct: 19  DIKIIQNREVFSYS------IDSVLLSRFPKLPNRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIE 176
              VGV+I  +  ++A+ +   NG+S+R   +  D   ++   F     D+I+ NPPY +
Sbjct: 70  ATIVGVEIQERLADMAERSIQLNGLSDRMSMITDDL-KNLPHHFPGSKIDLILCNPPYFK 128

Query: 177 SVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                 L       +   +   +LD           I     R L  +G   +    ++ 
Sbjct: 129 VDEHSNLNESPHYLLARHEITTNLD----------QICQVAQRTLKSNGRLVMVHRPDRF 178

Query: 233 VDVVRIFESRKLFLVN-------AFKD 252
           +D++       L             KD
Sbjct: 179 LDIIETMIRYNLAPKRIQFVYPKVHKD 205


>gi|315655231|ref|ZP_07908132.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333]
 gi|315490486|gb|EFU80110.1| 16S rRNA methyltransferase [Mobiluncus curtisii ATCC 51333]
          Length = 214

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 35/168 (20%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G G G + L L  E P  +   VD++ +ALE+ ++NA  NG+       ++D F+++
Sbjct: 74  VDVGCGWGPLALTLAVERPSAQVYAVDVNTRALELTRANATANGLHNIQVLSEADAFATL 133

Query: 162 -EGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                DVI SNPP  +    +  +    R                            L  
Sbjct: 134 GPNSVDVIWSNPPVRVGKTALHSMWEAWR--------------------------TRLKP 167

Query: 220 DGLCSVEIGYNQKVD-VVRIFESRKLF--LVNAFKDYGGNDRVLLFCR 264
           +G+  + +G N   D  +            + + K   G  RVL   R
Sbjct: 168 EGVAYLVMGRNLGSDPFLAYLNEHGWTGGKIASSK---GF-RVLQLRR 211


>gi|213962037|ref|ZP_03390302.1| methyltransferase small [Capnocytophaga sputigena Capno]
 gi|213955390|gb|EEB66707.1| methyltransferase small [Capnocytophaga sputigena Capno]
          Length = 234

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 12/161 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G GTG + L L +         V+I   A      N   +   +R  
Sbjct: 29  WTPLEQPQSILDIGAGTGLLALMLAQRCDALTIDAVEIDEHAYIECTENFEASPWGDRLF 88

Query: 152 TLQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +   ++F+ ++  +D+I+SNPP+  +        + R+     +           + 
Sbjct: 89  CYHASFEEFFTEMDEPYDLIISNPPFYPTDYKT--PEKARN----TARFSDA---LPPKQ 139

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           + +GV+R L  +G  SV + Y +    + +  +  LF    
Sbjct: 140 LLEGVNRLLAIEGKFSVILPYTESEGFITLAATFGLFPQQI 180


>gi|148827622|ref|YP_001292375.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG]
 gi|262828400|sp|A5UGT6|TRMN6_HAEIG RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|148718864|gb|ABQ99991.1| hypothetical protein CGSHiGG_05325 [Haemophilus influenzae PittGG]
          Length = 232

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A++ A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRI 89

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D    ++     FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     +++
Sbjct: 141 --WLEWAATRLSENGRISFVLPYEAGKTLIK 169


>gi|145636309|ref|ZP_01791978.1| phosphatidylserine synthase [Haemophilus influenzae PittHH]
 gi|145270474|gb|EDK10408.1| phosphatidylserine synthase [Haemophilus influenzae PittHH]
          Length = 232

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A++ A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAVKQAQENINDSVWKNRI 89

Query: 151 DTLQSDWFSSVE---GLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D    ++     FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLIQTDIQHFLQTTAQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     +++
Sbjct: 141 --WLEWAATRLSENGRISFVLPYEAGKTLIK 169


>gi|320527675|ref|ZP_08028849.1| methyltransferase small domain protein [Solobacterium moorei F0204]
 gi|320131996|gb|EFW24552.1| methyltransferase small domain protein [Solobacterium moorei F0204]
          Length = 199

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 70/200 (35%), Gaps = 45/200 (22%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFK 123
            T  +  F     ++  VD      L  I K ++  RILD+G G G + +      P  +
Sbjct: 29  FTTDNGVF-----SKTGVDYGSYVLLKAISKEELHGRILDMGCGYGTLGIITKSLFPSSE 83

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DI+ +A+E+A+ N   N V     TL SD ++  +G +  I++NPP          
Sbjct: 84  VTMADINPRAVELAQLNCGLNQVEC--TTLVSDGYAETKGQYHFIITNPPI--------- 132

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD-----VVRI 238
                             G      + +    HL   G     I   Q  +        +
Sbjct: 133 ----------------RTGKKVIYKMFEDAYNHLEVGGSIYAVIRKQQGAESAKKKFAEV 176

Query: 239 F-------ESRKLFLVNAFK 251
           F       + R  +++ + K
Sbjct: 177 FGNCEVISKDRGYYILQSRK 196


>gi|327468975|gb|EGF14447.1| methyltransferase [Streptococcus sanguinis SK330]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|315639732|ref|ZP_07894871.1| methyltransferase [Enterococcus italicus DSM 15952]
 gi|315484509|gb|EFU74966.1| methyltransferase [Enterococcus italicus DSM 15952]
          Length = 256

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 86/202 (42%), Gaps = 21/202 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + PRI K+   RI+DL  G GAV L + +++  
Sbjct: 27  DIKIIQSKEVFSFS------LDAVLLANFPRIPKKG--RIVDLCAGNGAVGLFISRKT-N 77

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + + +++  +  ++A+ +   N ++ +     +D   S+        D++V NPPY   
Sbjct: 78  AEIIQIELQERLADMAQRSIQLNDLANQMKIYTADLKDSLAFVAPDSVDLLVCNPPYFPH 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                    V++ +P +++       +    I    S+ L  +G  ++    ++ + ++ 
Sbjct: 138 Q-----PQSVKNPNPYLAIARHEIHTN-LEEIVAMSSKLLKTNGRLALVHRPDRFLTILD 191

Query: 238 IFESRKL--FLVNAFKDYGGND 257
               ++L    V       G D
Sbjct: 192 AMRRQRLVPKHVQFVYPKNGKD 213


>gi|89101177|ref|ZP_01174009.1| hypothetical protein B14911_01501 [Bacillus sp. NRRL B-14911]
 gi|89084112|gb|EAR63281.1| hypothetical protein B14911_01501 [Bacillus sp. NRRL B-14911]
          Length = 246

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 22/200 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L  +    +R+  S   F    +  LL       +           ++DL +G 
Sbjct: 8   ERLDYLLAEK----LRIIQSPSVFSFSLDAVLL-------ARFSYVPIQKGNLIDLCSGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G + L L   +      GV+I  +  ++A  +   NG+ +R   +  D          G 
Sbjct: 57  GVIPLFLSSRTKGS-ITGVEIQERLHDMAVRSIEYNGLEDRIKMIHGDIKEMPTLLGHGK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D++  NPPY  +   D +          +++      L     +    S+ L + G  +
Sbjct: 116 YDIVTCNPPYFLTPAKDQINANE-----HLAIARHEI-LCTLEDVVRVSSQLLKQGGKAA 169

Query: 225 VEIGYNQKVDVVRIFESRKL 244
                 + +D+V +    KL
Sbjct: 170 FVHRPGRLLDMVTLMRQYKL 189


>gi|325694062|gb|EGD35980.1| methyltransferase [Streptococcus sanguinis SK150]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 79/191 (41%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AQILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L  G         I     R L  +G  ++     + +
Sbjct: 130 DKKSNLNESQHYLLARHEISTNL--GE--------ICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|325690144|gb|EGD32148.1| methyltransferase [Streptococcus sanguinis SK115]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AQIMAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSRVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|297562400|ref|YP_003681374.1| methylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
 gi|296846848|gb|ADH68868.1| methylase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
          Length = 231

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 73/182 (40%), Gaps = 23/182 (12%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              +  + +T LL        L +  +     +LD+G+GTGA+ +     +       +D
Sbjct: 21  PGVYPAQEDTSLL-----RTVLRQRGRVAGRSVLDVGSGTGALGIE-AFRAGAASLTSID 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S +++  +  N+  +GV       + D F+ V    FD++++NPPY+ +          
Sbjct: 75  LSRRSVLASWLNSRLHGVPA--TVRRGDLFAPVAPHRFDLVLANPPYMPATGRRLPRH-- 130

Query: 188 RDFDPRIS--LDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGYNQKVDVVRIFESR 242
                R++   D G DG      I  G    L++DG   +   E+   Q    +   E  
Sbjct: 131 -----RMARCWDAGPDGRILLDRICAGAPSVLSEDGALLLVQSELADEQ--ATLDRLEKA 183

Query: 243 KL 244
            L
Sbjct: 184 GL 185


>gi|240948849|ref|ZP_04753205.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305]
 gi|240296664|gb|EER47275.1| hypothetical protein AM305_08109 [Actinobacillus minor NM305]
          Length = 233

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 26/150 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +V RILD+GTG+G + L L + +    + + +++   A + A  N   +  + R   +  
Sbjct: 38  NVQRILDMGTGSGLIALMLGQRTEERCQIMALELEENAYQQAVENVKNSAWTARIKVIHG 97

Query: 156 DWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI----- 209
           D   +S    FD+IVSNPPY    +                           RT+     
Sbjct: 98  DVMNTSFLEKFDLIVSNPPYFSQSLATRNPQ-----------------RDLARTVVQSHL 140

Query: 210 --ADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +   + L++ G  +  +  +    +++
Sbjct: 141 DWLNQARKWLSETGKITFILPVDAGDKLIQ 170


>gi|237757209|ref|ZP_04585623.1| methyltransferase small [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690629|gb|EEP59823.1| methyltransferase small [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 232

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 20/151 (13%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ++ LLVD         +  +   +I+D+GTG+G + + +  +    K   +++     +I
Sbjct: 20  DSLLLVDF--------LNIKSSGKIIDIGTGSGIIPILISLKYKNLKLYALEVQEDLFDI 71

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           AK N   N V  +           +     FD +V NPPY +      +  ++   +   
Sbjct: 72  AKRNFQINNVHVQIALGNVKDVKKIYNHQYFDYVVINPPYFKEGNYKNIQEKIARSE--- 128

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   L+       G    L   G   +
Sbjct: 129 -------ALAKLEDFIYGSWYLLKNKGKLYL 152


>gi|269217493|ref|ZP_06161347.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269213114|gb|EEZ79454.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 679

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 30/173 (17%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P+  + V  A              R+LD+ TG G    A+L      +    D+S +
Sbjct: 231 IPGPDHVMPVGGATRTLAALAAYGADERVLDVRTGCGY--HAILAALCGARVTATDVSAR 288

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------------------LFDVIVSNP 172
           AL  A+ NA   G     D  +      V G                     +DV+VSNP
Sbjct: 289 ALGYARFNAALAGAE--IDFRRGSLLEPVRGPRFDLADAVDSLDSWSAARERYDVVVSNP 346

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P++ +         VR +      DGG +G S    +   +   L   G   +
Sbjct: 347 PFVITPEAARADG-VRTY-----RDGGREGDSLLAELVGELRGVLAPGGRAWM 393


>gi|160914580|ref|ZP_02076795.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
 gi|158433738|gb|EDP12027.1| hypothetical protein EUBDOL_00588 [Eubacterium dolichum DSM 3991]
          Length = 198

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 38/199 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAVCLALLKE 118
           ++      +  F     ++  +D      L  I +R+    R+LDLG G G V + L K 
Sbjct: 25  FDYSFITDNGVF-----SKEAIDYGTQVLLKTICEREELGERVLDLGCGYGPVGVVLKKI 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
            P      +D++ +A+++AK N   N +        S+ +  +    +  I++NPP    
Sbjct: 80  YPTKAFEMIDVNPRAVQLAKENICRNQLEADVHV--SNIYEDLHQESYSDIITNPPIRA- 136

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DV 235
                                   G +   T+ +   +HL   G   V I   Q     V
Sbjct: 137 ------------------------GKAVIYTMFEEAYQHLELGGKLWVVIRKQQGAPSAV 172

Query: 236 VRIFESRKLFLVNAFKDYG 254
            +I +      +   +D G
Sbjct: 173 KKIKDVFGNCEI-IKRDSG 190


>gi|148270786|ref|YP_001245246.1| ribosomal L11 methyltransferase [Thermotoga petrophila RKU-1]
 gi|281413091|ref|YP_003347170.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
 gi|166223499|sp|A5IN97|PRMA_THEP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|147736330|gb|ABQ47670.1| LSU ribosomal protein L11P methyltransferase [Thermotoga petrophila
           RKU-1]
 gi|281374194|gb|ADA67756.1| ribosomal L11 methyltransferase [Thermotoga naphthophila RKU-10]
          Length = 264

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V        S
Sbjct: 128 KEGNTVLDVGCGTGILAIA-AKKLGASQVVAVDVDEQAVEVAEENVRKNDVDVLVKW--S 184

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S VEG FD++VSN
Sbjct: 185 DLLSEVEGTFDIVVSN 200


>gi|308180830|ref|YP_003924958.1| methyltransferase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|308046321|gb|ADN98864.1| methyltransferase (putative) [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 252

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 19/188 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F    +  LL D A      ++ K    +I+DL  GTGAV L        
Sbjct: 19  DIQIIQSSQVFAFSLDAVLLGDFA------QVAKGAKSQIVDLCAGTGAVGL-FASAKTQ 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
                V+I  +  E+A+ + + N ++++   L  D  +      +   D ++ NPPY + 
Sbjct: 72  GHITAVEIQPRLAEMAQRSVILNDLTQQMTVLNEDLLAITHQLPKDSVDTVLCNPPYFKD 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    V++ +P +++      LS     I    S  L  +G         +  D+ 
Sbjct: 132 Q-----PQSVKNPNPHLAIARHE--LSANLDQILAVTSDLLKMNGKAYFVHRPERLDDLF 184

Query: 237 RIFESRKL 244
               + +L
Sbjct: 185 SAMAANRL 192


>gi|29831161|ref|NP_825795.1| rRNA or tRNA methyltransferase [Streptomyces avermitilis MA-4680]
 gi|29608275|dbj|BAC72330.1| putative rRNA or tRNA methyltransferase [Streptomyces avermitilis
           MA-4680]
          Length = 529

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +   +    D++ +AL         +G     D  +
Sbjct: 186 RTPVAAALDLGTGSGIQALHAARHA--TRVTATDLNPRALHTTALTLALSGAPA-ADLRE 242

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  +  +  +D+IVSNPP++ S                   DGG+ G    RT+   
Sbjct: 243 GSLFEPIAADETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQQ 291

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               L + G       +    
Sbjct: 292 AGDRLTEGGYAQFLANWQHVE 312


>gi|42560604|ref|NP_975055.1| methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492100|emb|CAE76697.1| Methyltransferase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|301320502|gb|ADK69145.1| methyltransferase small domain protein [Mycoplasma mycoides subsp.
           mycoides SC str. Gladysdale]
          Length = 240

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 20/171 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      +  +   +I D GT    + L +L +    K +GV+I  KA+EIA  N  
Sbjct: 27  DSVLVARFCNLNSKK-KKICDFGTNNAVIPL-ILSKYTRAKIIGVEIQNKAVEIANENIK 84

Query: 143 TNGVSERFDTLQSDW--FSSVEGL-FDVIVSNPPYIE---SVIVDCLGLEVRD--FDPRI 194
            NG+ ++ + + +D   FS +    FD++V NPP+ +   +  +  + LEV +   +  I
Sbjct: 85  LNGLEDQIEIIHADIKEFSKLHNQEFDLVVCNPPFFKMDGNPKLKEISLEVANARHELLI 144

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +L          + I    SR L   G  ++     +  +++ +F    ++
Sbjct: 145 TL----------KDIIKSASRCLKNKGNFTIVHRSERLSEIINLFYKYNIY 185


>gi|125717564|ref|YP_001034697.1| hypothetical protein SSA_0711 [Streptococcus sanguinis SK36]
 gi|125497481|gb|ABN44147.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
 gi|325697121|gb|EGD39008.1| methyltransferase [Streptococcus sanguinis SK160]
 gi|332366026|gb|EGJ43782.1| methyltransferase [Streptococcus sanguinis SK1059]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +S+ F         VDS L    P++ +R +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNSEVFSYS------VDSVLLSRFPKLPQRGL--IVDLCAGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N ++++   +Q D  +    + G   D+I+ NPPY + 
Sbjct: 70  AKILAVEIQERLADMAERSIELNDLTQQMQVIQDDLKNLGRYITGSKVDMILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     R L  +G  ++     + +
Sbjct: 130 DKQSNLNESQHYLLARHEISTNL----------EEICKIAQRVLKSNGRLAMVHRPERFL 179

Query: 234 DVVRIFESRKL 244
           D++   ++  L
Sbjct: 180 DILDTMQAHNL 190


>gi|322387426|ref|ZP_08061036.1| methyltransferase [Streptococcus infantis ATCC 700779]
 gi|321141955|gb|EFX37450.1| methyltransferase [Streptococcus infantis ATCC 700779]
          Length = 249

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  +S+ F         VDS L    PR  K  +  I+D   G GAV L        
Sbjct: 20  DIKIIQNSEVFSYS------VDSVLLSRFPRFPKNGL--IVDFCAGNGAVGL-FASSRTK 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   NG+  +   +  D     S ++G   D+I+ NPPY + 
Sbjct: 71  AKILSVEIQERLADMAERSVRLNGLGGQMQVICDDLKNMPSHIQGSKVDLILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPNSNLNESEHYLLARHEITTNL----------KEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILATLQQHNL 191


>gi|227112602|ref|ZP_03826258.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 349

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W D Y    V +      F  R +    +D      L   E     ++LD+  G G +  
Sbjct: 158 WWDEYLTDGVTVKTLPGVFS-RDD----LDPGSRLLLSTFEPHMKGKVLDIACGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K+SP  +    D+S  A+E +K+    N +    + + S+ +S + G FD+IVSNPP
Sbjct: 213 VLAKQSPKIRLTLSDVSAAAIESSKATLAANALEG--EVIASNVYSDINGRFDMIVSNPP 270

Query: 174 YIESVIVDCLGLE 186
           + + +       E
Sbjct: 271 FHDGLQTSLQAAE 283


>gi|238918501|ref|YP_002932015.1| 16S ribosomal RNA m2G1207 methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|238868069|gb|ACR67780.1| ribosomal RNA small subunit methyltransferase C (2) [Edwardsiella
           ictaluri 93-146]
          Length = 346

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 28/162 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F  R      +D      L  +      R+LD+G G G +  A+ + SP 
Sbjct: 166 SLRIATLPGVFS-RDG----LDIGSHLLLSSLPHGLKGRVLDVGCGAGVLSAAITRMSPE 220

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                 D++  AL  ++     N +    + L S+ FS + G FD+I+SNPP+       
Sbjct: 221 TTLTLSDVNAAALTASRQTLAQNEIDG--EILASNVFSDISGRFDLIISNPPFH------ 272

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                          DG    L   +T+  G   HL   G  
Sbjct: 273 ---------------DGVQTSLLAAQTLIRGAVSHLQLGGEL 299


>gi|271970460|ref|YP_003344656.1| methylase of polypeptide chain release factors-like protein
           [Streptosporangium roseum DSM 43021]
 gi|270513635|gb|ACZ91913.1| Methylase of polypeptide chain release factors- like protein
           [Streptosporangium roseum DSM 43021]
          Length = 480

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A A       +R V R LDLGTG G   L L   +   + V  D++ +ALE+A+ +   +
Sbjct: 128 ASANLAQLASRRPVERALDLGTGCGVQVLHLADRAR--EIVATDVNPRALELARLSWALS 185

Query: 145 GVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           G+    D  Q   F  V +  FD+IVSNPP++ S        E            G +  
Sbjct: 186 GIKG-VDARQGSLFDPVADDRFDLIVSNPPFVISPGGRFTYRE-----------SGFEAD 233

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              R +     R L   G C +
Sbjct: 234 GFCRDLVRLAPRFLAPAGTCQL 255


>gi|312867278|ref|ZP_07727488.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
 gi|311097407|gb|EFQ55641.1| methyltransferase small domain protein [Streptococcus parasanguinis
           F0405]
          Length = 248

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P++ KR +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            + +GV+I  +  ++A  +   N ++++   +  D     +       D+I+ NPPY + 
Sbjct: 70  AQIIGVEIQERLADMATRSIALNDLNQQMSMITDDLKHLPQHIGGSKVDIILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +LD           I     R L  +G  ++    ++ +
Sbjct: 130 DEHSNLNESEHYLLARHEITTNLD----------EICHVAQRVLKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 180 DIIETMKRYNL 190


>gi|167042826|gb|ABZ07544.1| putative ribosomal protein L11 methyltransferase (PrmA) [uncultured
           marine microorganism HF4000_ANIW137I15]
          Length = 337

 Score = 76.3 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 29/151 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+G G+G + +A  K  P  +   +DI   A    + NA  N V+ R    +   
Sbjct: 199 PGRVLDIGCGSGILGIAAAKWFPRCRVTSIDIDPGAYHATRDNARKNRVAGRMTVREGSL 258

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                G F +I++N                   +P   L G        R +       L
Sbjct: 259 -ERTRGKFGLILAN----------------LYLEPLRDLAG-----LMARRLEKEGRAVL 296

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +  G+       +Q   + +      L +V 
Sbjct: 297 S--GILV-----SQADALTKALSDVGLGVVR 320


>gi|66357544|ref|XP_625950.1| Ydr140wp-like HemK family methylase. archaeal-like.  RNA methylase
           [Cryptosporidium parvum Iowa II]
 gi|46226790|gb|EAK87756.1| Ydr140wp-like HemK family methylase. archaeal-like.  RNA methylase
           [Cryptosporidium parvum Iowa II]
          Length = 254

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 19/181 (10%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG---- 124
            + +EP  ++  L++ AL      I K     I ++G G+G +   LLK           
Sbjct: 13  ENVYEPSEDSF-LMEDALILEKNEILKAKPRLICEIGCGSGYLTACLLKIIKESDAEFSL 71

Query: 125 ---VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESV 178
                VD++ KALE+++     N ++   + ++   F+ +    GLF++I+ NPPY+ S 
Sbjct: 72  PISYLVDVNTKALEMSEKVISNNKINSPIELIKMSLFTCLNRNRGLFEIIIFNPPYVPSS 131

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVVR 237
             + L   + +     +  GG++GL        G       + L   E  +  Q+ +++R
Sbjct: 132 NKE-LNQSILNCGIDSAWSGGVNGLFFVSYFLFG------DNRLILSETSHQFQEEEIIR 184

Query: 238 I 238
           I
Sbjct: 185 I 185


>gi|313890747|ref|ZP_07824372.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120848|gb|EFR43962.1| methyltransferase small domain protein [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 249

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + D F         +DS L    PR+  R +  I+DL +G GAV L     +  
Sbjct: 19  DIKIIQNRDVFSYS------IDSVLLSRFPRLPSRGL--IVDLCSGNGAVGL-FASRNTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            + V ++I  +  E+A+ +   N + E+   +  D    +  +     D+I+ NPPY +S
Sbjct: 70  AQIVEIEIQERLAEMAQRSIKLNQLEEQVSMICDDLKHLLNHVPRSGVDLILCNPPYFKS 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  +         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TESSKKNMSEHYLLARHEITTNL----------EEICSISRHGLKSNGRLAMVHRPDRFI 179

Query: 234 DVVRIFESRKL 244
           ++V       L
Sbjct: 180 EIVDSLRKYGL 190


>gi|306824878|ref|ZP_07458222.1| methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433089|gb|EFM36061.1| methyltransferase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 249

 Score = 76.3 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K  +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKNGL--IVDFCAGNGAVGL-FASSRTK 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AKILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPARIQGSRVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------KEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLQRHNL 191


>gi|113461439|ref|YP_719508.1| SAM-dependent methyltransferase [Haemophilus somnus 129PT]
 gi|123031428|sp|Q0I4T7|TRMN6_HAES1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|112823482|gb|ABI25571.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 236

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                    +LDLGTGTG + L L + SP       V++  +A   AK N   +  + + 
Sbjct: 33  WANINQANTLLDLGTGTGLIALMLAQRSPEHCHISAVELDPQAYLQAKDNIQQSPWANKI 92

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVI 179
              Q D        E  FDVI +NPPY +  I
Sbjct: 93  KIFQQDIIVFAQDCEHKFDVITANPPYFKQGI 124


>gi|254388756|ref|ZP_05003989.1| rRNA or tRNA methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|294813367|ref|ZP_06772010.1| rRNA or tRNA methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|326441698|ref|ZP_08216432.1| putative methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|197702476|gb|EDY48288.1| rRNA or tRNA methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|294325966|gb|EFG07609.1| rRNA or tRNA methyltransferase [Streptomyces clavuligerus ATCC
           27064]
          Length = 504

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 15/138 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L   + +   +    D++ +AL   +     +   E  +  +
Sbjct: 161 RTPVGSALDLGTGSGIQALHAAQHA--TRVTATDLNPRALHFTRLTLALSAAPE-AELKE 217

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V +  FD+IVSNPP++ S                   DGG+ G    R++    
Sbjct: 218 GSLFEPVGQDTFDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRSLVQQA 266

Query: 214 SRHLNKDGLCSVEIGYNQ 231
              LN  G       +  
Sbjct: 267 GDRLNDGGYAQFLANWQH 284


>gi|15643837|ref|NP_228885.1| ribosomal protein L11 methyltransferase, putative [Thermotoga
           maritima MSB8]
 gi|38605526|sp|Q9X0G8|PRMA_THEMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|4981624|gb|AAD36156.1|AE001768_5 ribosomal protein L11 methyltransferase, putative [Thermotoga
           maritima MSB8]
          Length = 264

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD+G GTG + +A  K+    + V VD+  +A+E+A+ N   N V        S
Sbjct: 128 KEGNTVLDVGCGTGILAIA-AKKLGASRVVAVDVDEQAVEVAEENVRKNDVDVLVKW--S 184

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S VEG FD++VSN
Sbjct: 185 DLLSEVEGTFDIVVSN 200


>gi|323491503|ref|ZP_08096685.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG
           20546]
 gi|323314257|gb|EGA67339.1| tRNA (adenine-N(6)-)-methyltransferase [Vibrio brasiliensis LMG
           20546]
          Length = 235

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 10/160 (6%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                I+      +LD+GTGTG + L   + S       +DI   A+E A++N   +  S
Sbjct: 29  MLGAWIDLAGYKSLLDIGTGTGLLALMCAQRSHLLNIEAIDIEQNAIEAAQANFDASAWS 88

Query: 148 ERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R     +D      +  F+ I+ NPPY  S                 ++      L H 
Sbjct: 89  DRLTLHHADVLKHPFKHSFEAIICNPPYFNSGEQAANS--------SRAVARHTSTLEHS 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           R +       L+ +G  S  +   +    + I +++   L
Sbjct: 141 R-LLKRCWSLLSDNGCASFVLPIVEGEQFIDIAKTQGWQL 179


>gi|297625531|ref|YP_003687294.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921296|emb|CBL55849.1| rRNA (guanine-N2-)-methyltransferase [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 329

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD        R        +LDLG G+G +   L + +P     GVD S  A++  +  +
Sbjct: 172 VDDGTRLLAERCADLHGNDLLDLGCGSGILATLLARANPEATVHGVDTSLAAVDSTRITS 231

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG          +         DVIV NPP+   V         +D +P +       
Sbjct: 232 EANGRHVTVHW-AWNLNDWPADSLDVIVCNPPFHRGV--------AKDSEPAL------- 275

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                  +     R L   G    
Sbjct: 276 ------EMFTEAGRLLRPGGEFWC 293


>gi|260890353|ref|ZP_05901616.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
           F0254]
 gi|260859973|gb|EEX74473.1| putative N-6 adenine-specific DNA methylase [Leptotrichia hofstadii
           F0254]
          Length = 228

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   +ILD+GTG G + L L + S   +  G+++     EIA  N   N    +   + 
Sbjct: 26  NRKTKKILDIGTGCGIIALLLAQRS-KAQITGIELQETMAEIAIRNINGNKFQNQVKIIN 84

Query: 155 SDW--FSSVEGL--FDVIVSNPPYIE 176
            D   + ++     FD IV+NPPY E
Sbjct: 85  EDIKNYKNIFNRDEFDTIVTNPPYFE 110


>gi|256845193|ref|ZP_05550651.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|256718752|gb|EEU32307.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_36A2]
          Length = 223

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + VG+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELVGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D     +   FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANMALELNKIEKNIQFECMDIREYKISNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   G        ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGSLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|170783110|ref|YP_001711444.1| putative methyl transferase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157680|emb|CAQ02881.1| putative methyl transferase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 418

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 22/131 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D    +DLG GTG +  A+    P  + +  D S  A++ A++    NGV+E    ++
Sbjct: 268 PEDARVAVDLGCGTGVIASAVALARPGIRVIATDQSWAAVDSARATVAANGVAEWVTVVR 327

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  S+V +G  D+++ NPP+     V                     GL+    +    
Sbjct: 328 DDAGSTVPDGSADLVLLNPPFHTGATVHA-------------------GLAP--RLFAAA 366

Query: 214 SRHLNKDGLCS 224
           +R L   G   
Sbjct: 367 ARMLRPGGQLW 377


>gi|269103445|ref|ZP_06156142.1| predicted O-methyltransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163343|gb|EEZ41839.1| predicted O-methyltransferase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 237

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 15/173 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +  ++E+     ILD+GTG+G + L   + +       +++   A  +AK N  
Sbjct: 24  DGILLGAWAKLEQTQP--ILDIGTGSGLLALMAAQRTGDASITAIELDPTAALVAKDNFG 81

Query: 143 TNGVSERFDTLQS---DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            +  S R   +++    WF ++    F  IV NPPY         G   +          
Sbjct: 82  HSPWSARLSCIEANLIHWFPTISKQTFGSIVCNPPYFNFGQQAQRGQRAQAR-------- 133

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             D LSH   +   +   L  +G  S+ +   +   +++      L      +
Sbjct: 134 HTDTLSHS-ALLQALKHLLADNGQASLILPTYEGEQLIKAAADYGLSCCRLCR 185


>gi|254391081|ref|ZP_05006289.1| methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|294815552|ref|ZP_06774195.1| 16S rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|326443903|ref|ZP_08218637.1| 16S rRNA m(2)G 1207 methyltransferase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704776|gb|EDY50588.1| methyltransferase [Streptomyces clavuligerus ATCC 27064]
 gi|294328151|gb|EFG09794.1| 16S rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
          Length = 209

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 27/193 (13%)

Query: 63  VRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + L   S  F      P T++L+++A          R+   ILDLG G G + L      
Sbjct: 32  LDLRTDSGVFSHSRLDPGTKVLLENA-------PLPRNRGDILDLGCGYGPIALTFATRR 84

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              +   VD++ +AL + + NA T  +      L  +    V   F  I SNPP    + 
Sbjct: 85  KRLRVWAVDVNERALGLVRENAETARLGNVTACLPDEVPEDV--RFGTIYSNPPI--RIG 140

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
              +   +  + P +  DGG   L   + + +D +++ L             Q +   R+
Sbjct: 141 KAEMHAMLLRWLPLL-QDGGTAYLVVQKHLGSDSLAKWL-----------DAQGLPAARL 188

Query: 239 FESRKLFLVNAFK 251
              R   L+   K
Sbjct: 189 LSHRGYRLLEVQK 201


>gi|332300278|ref|YP_004442199.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707]
 gi|332177341|gb|AEE13031.1| Methyltransferase type 11 [Porphyromonas asaccharolytica DSM 20707]
          Length = 244

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL             ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +
Sbjct: 25  ALFLGAWARTAHTASQVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRS 84

Query: 145 GVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              +R   L  D  +         +D+I+SNPPY + +      L     
Sbjct: 85  PYGDRLTALSCDITAPELALPPRTYDLIISNPPYYDGLQPATAPLRQARH 134


>gi|306821417|ref|ZP_07455022.1| SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550539|gb|EFM38525.1| SAM-dependent methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 248

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 61/158 (38%), Gaps = 30/158 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  + +K D +   DLGTGTG + + +  +S   K   ++I     ++A+ + 
Sbjct: 29  IDAVLLANFVKFKKNDTL--ADLGTGTGIIPILVKAKSNIAKIYAIEIQKHIADMARRSV 86

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   +  + L  +   ++    +   D+I +NPPY+                P+  L 
Sbjct: 87  ELNNFQDDIEILNINLKDTLNFIPKYSIDIITTNPPYM----------------PKEKLL 130

Query: 198 GGIDGLSHYR--------TIADGVSRHLNKDGLCSVEI 227
            G + +   R         I    S  L  +G   +  
Sbjct: 131 SGNESMMISRNEIFCDIGDIMKVSSELLKPNGKIYMIH 168


>gi|300858633|ref|YP_003783616.1| hypothetical protein cpfrc_01216 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686087|gb|ADK29009.1| hypothetical protein cpfrc_01216 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302330899|gb|ADL21093.1| Putative methyltransferase [Corynebacterium pseudotuberculosis
           1002]
          Length = 508

 Score = 75.9 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 17/153 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISC 131
            P  +  L + +A    +    +  V  +LDLG+G+G   L      P     +  DI  
Sbjct: 132 IPGKDHVLGIGAASLSLISATPRTPVHTLLDLGSGSGIQALGQA---PHAHTIIATDIHD 188

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +AL+ A++N+  N V    +     WF  V G  FD IV+NPP++          E+   
Sbjct: 189 RALDFAEANSAANKVP--LEIRSGSWFDPVAGEKFDRIVANPPFVVG------PPEIG-- 238

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              +  D G+D       +      HL + G  
Sbjct: 239 --HVYRDSGLDLDGATEYVVRKGIDHLKEQGCL 269


>gi|84496883|ref|ZP_00995737.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649]
 gi|84383651|gb|EAP99532.1| hypothetical protein JNB_05150 [Janibacter sp. HTCC2649]
          Length = 207

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 61  YNVRLTLSSDTFEPR---PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            +V + ++   F P      T +L+D          +     R LD+G G G + L L  
Sbjct: 34  RSVTVQVAPGIFSPGGLDKGTAVLLDEV-------PDPPPSGRFLDIGCGWGPIALTLGL 86

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            S   + + VD++ +++++   NA T  +      +  D   S    +D+I SNPP    
Sbjct: 87  LSEHAEVLAVDVNERSVDLTNRNATTLDLPH-VTAVTPDAVDS-NATYDLIWSNPPI--R 142

Query: 178 VIVDCLGLEVRDFDPRISLDG 198
           +    L   +  + PR++ DG
Sbjct: 143 IGKAALHDLLHLWLPRLAPDG 163


>gi|169617526|ref|XP_001802177.1| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15]
 gi|160703427|gb|EAT80357.2| hypothetical protein SNOG_11945 [Phaeosphaeria nodorum SN15]
          Length = 245

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 35/186 (18%)

Query: 70  DTFEPRPETELLV-------DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---- 118
             +EP  ++ LL+       ++A        E      +L++G G+G V   +       
Sbjct: 14  RVYEPAEDSYLLLDTLSSPSETAFLRDRFNGESLAPPLVLEVGVGSGVVLAFVAANAESI 73

Query: 119 --SPFFKGVGVDIS---CKALEIAKSNAVT---NGVSERFDTLQSDWFSSV-EGLFDVIV 169
                   +G DI+   CKA      NA+    NG S   D +  D  +++     DV +
Sbjct: 74  FGRHDVLTLGTDINSFACKAAAQTARNAIKERDNGRSVFLDVVNGDLATAIRPNSVDVFI 133

Query: 170 SNPPYIESVIVDCLGLEVRD----------FDPRISL-----DGGIDGLSHYRTIADGVS 214
            NPPY+ + + D    +  +          F+    L      GG DG+     + + V 
Sbjct: 134 FNPPYVPAELPDFTRHDQHNAIPGGKDATSFEQDSYLLELSYAGGEDGMVVTNRMLEQVP 193

Query: 215 RHLNKD 220
             L+K 
Sbjct: 194 EILSKG 199


>gi|27365037|ref|NP_760565.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
 gi|81844705|sp|Q8DBY0|RSMC_VIBVU RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|27361183|gb|AAO10092.1| Ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
          Length = 340

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 38/176 (21%)

Query: 59  DFYNVRLTLS---------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            F +  + +             F        L    L  +LP +      ++LD G G G
Sbjct: 159 WFRHYSINIHGQQLEIQSLPGVFSHGEFD--LGSQLLLETLPSLSG----KVLDFGCGAG 212

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            +   + K +P  +    DI+  AL  +++    NG+  R     SD +S     +  I+
Sbjct: 213 VIGAFMAKRNPAIELEMCDINAYALASSEATLAANGLQGRVFA--SDIYSDTADDYRFII 270

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           SNPP+   +  +    E                     T+     ++LNK G   +
Sbjct: 271 SNPPFHSGLDTNYKAAE---------------------TLLGQAPQYLNKQGELII 305


>gi|282857422|ref|ZP_06266655.1| methyltransferase [Pyramidobacter piscolens W5455]
 gi|282584707|gb|EFB90042.1| methyltransferase [Pyramidobacter piscolens W5455]
          Length = 255

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 11/155 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R   R+++LG   G V L L K  P  +  G+DI  + +E+A+ NA  NG++      
Sbjct: 47  RPRPGERVIELGCAHGGVSLILAKRFPHSRFEGLDIQPRLIELARENAARNGLTANARFE 106

Query: 154 QSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             D            FD +V NPPY +         E      R++  G +  L+    +
Sbjct: 107 TGDLREHRRLYEHQSFDAVVVNPPYEDPGFGRRAEAET----NRLARQGEMCPLAD---V 159

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +     L   G   + +   +  + + +  + +L
Sbjct: 160 CEASRFLLKNGGRLYMVMRALRLAETLGLLRAHRL 194


>gi|221134002|ref|ZP_03560307.1| hypothetical protein GHTCC_03659 [Glaciecola sp. HTCC2999]
          Length = 388

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 39/205 (19%)

Query: 64  RLTLSSDTFE----PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
              ++    +    P   + L +D    F +  +   +   ++DLG G G +   +L ++
Sbjct: 200 TWEITKPVLQLSHLPNVFSRLHLDIGARFLMQHLPLIEGEHVVDLGCGNGVIGCTVLADA 259

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
           P  K   VD S  A+E AK N   N   +  + D + ++  S V+    D+++ NPP+ +
Sbjct: 260 PNAKVTFVDESYMAIESAKRNVQDNFPEQYAQCDFVVANCLSQVDLEHVDLVLCNPPFHQ 319

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KV 233
                     V D                   +     + L   G   + IG        
Sbjct: 320 -------QNAVTDH--------------IAWQMFKDAKQVLRHGGELRI-IGNRHLPYGN 357

Query: 234 DVVR-------IFESRKLFLVNAFK 251
            + +       I  + K  +++ +K
Sbjct: 358 MLKKRYGGFTVIATNAKFSILSTYK 382


>gi|289209527|ref|YP_003461593.1| methyltransferase small [Thioalkalivibrio sp. K90mix]
 gi|288945158|gb|ADC72857.1| methyltransferase small [Thioalkalivibrio sp. K90mix]
          Length = 205

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R   +   F PR      +D      L RIE R     LDLG G G + L L +++P 
Sbjct: 32  SLRFRTTWGLFSPRR-----IDDGTRMLLDRIEVRPSDDCLDLGCGYGPIGLTLARKAPQ 86

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                VD +  A+E ++ NA  NG++       +      +  FD++ SN P
Sbjct: 87  GITTLVDTNFLAVEYSRRNAELNGITNVECVTSNGLAQIRDRRFDLVASNLP 138


>gi|71893759|ref|YP_279205.1| putative DNA methylase [Mycoplasma hyopneumoniae J]
          Length = 250

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 75/174 (43%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + K+ + + L++GT  GA+ + +       +   ++I+  A++IA+ N 
Sbjct: 23  VDTILLGNFLTLSKK-IKKALEIGTNNGALAILVAHRKSLLEIDALEINENAIKIAQKNV 81

Query: 142 VTNGVSERFDTLQSDW--FSSVE-----GLFDVIVSNPPY--IESVIVDCLGLEVRD--F 190
             N    +   +  D+  F  +        +D+I +NPPY  I +  +  +  +  +  +
Sbjct: 82  ELNKKGSQIRLIHMDFNHFWPLHNQKQLQKYDLIFANPPYFKIGTKKLKKVNSDFLNAIY 141

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  ++L            +  G S+ + + G  ++ +   + VD++ +      
Sbjct: 142 EFSLNLS----------QLISGASKIIQQKGKLALVLPIERFVDLIELLRENHF 185


>gi|54020189|ref|YP_115919.1| hypothetical protein mhp409 [Mycoplasma hyopneumoniae 232]
 gi|53987362|gb|AAV27563.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
 gi|144227615|gb|AAZ44494.2| putative DNA methylase [Mycoplasma hyopneumoniae J]
          Length = 256

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 75/174 (43%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + K+ + + L++GT  GA+ + +       +   ++I+  A++IA+ N 
Sbjct: 29  VDTILLGNFLTLSKK-IKKALEIGTNNGALAILVAHRKSLLEIDALEINENAIKIAQKNV 87

Query: 142 VTNGVSERFDTLQSDW--FSSVE-----GLFDVIVSNPPY--IESVIVDCLGLEVRD--F 190
             N    +   +  D+  F  +        +D+I +NPPY  I +  +  +  +  +  +
Sbjct: 88  ELNKKGSQIRLIHMDFNHFWPLHNQKQLQKYDLIFANPPYFKIGTKKLKKVNSDFLNAIY 147

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  ++L            +  G S+ + + G  ++ +   + VD++ +      
Sbjct: 148 EFSLNLS----------QLISGASKIIQQKGKLALVLPIERFVDLIELLRENHF 191


>gi|303237111|ref|ZP_07323681.1| methyltransferase small domain protein [Prevotella disiens
           FB035-09AN]
 gi|302482498|gb|EFL45523.1| methyltransferase small domain protein [Prevotella disiens
           FB035-09AN]
          Length = 231

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 12/133 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ILD+GTGTG + L + +         ++I   A + A  N   +    + + + S
Sbjct: 31  NGGEHILDIGTGTGLLALMMAQRFEKSLIDAIEIEENAYQQAAQNVAKSVFKSKINIIHS 90

Query: 156 DW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                  S    +D I+ NPPY  +         +++ +   ++    D L   + +   
Sbjct: 91  SLQNFAKSNINQYDSIICNPPYFVNS--------LKNNEKSKTIARHNDSLPF-KELISL 141

Query: 213 VSRHLNKDGLCSV 225
             + L  +G  S+
Sbjct: 142 AYKLLKTEGTLSL 154


>gi|296876846|ref|ZP_06900894.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
 gi|296432348|gb|EFH18147.1| methyltransferase [Streptococcus parasanguinis ATCC 15912]
          Length = 248

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P++ KR +  I+DL  G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------VDSVLLSRFPKLPKRGL--IVDLCAGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + +GV+I  +  ++A  +   N ++ +   +  D       ++G   D+I+ NPPY + 
Sbjct: 70  AQIIGVEIQERLADMATRSIALNDLNRQMSMITDDLKHLPQHIKGSKVDIILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +LD           I     R L  +G  ++    ++ +
Sbjct: 130 DEHSNLNESEHYLLARHEITTNLD----------EICHVAQRVLKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 180 DIIETMKRYNL 190


>gi|290580894|ref|YP_003485286.1| hypothetical protein SmuNN2025_1368 [Streptococcus mutans NN2025]
 gi|254997793|dbj|BAH88394.1| hypothetical protein [Streptococcus mutans NN2025]
          Length = 339

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FAATRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V++  +  ++A+ +   N ++ +   ++ D  + ++       D+I+ NPPY ++
Sbjct: 70  AKIIEVELQERLADMAQRSIQLNDLTSQVSMIRDDLKNLLDHVPRSKVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I     + L  +G  ++    ++ +
Sbjct: 130 AETSKKNLSEHYLLARHEIATNL----------EEICKISQQVLKTNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++  F+  KL
Sbjct: 180 EIIDTFKKYKL 190


>gi|262065982|ref|ZP_06025594.1| ribosomal RNA small subunit methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291380339|gb|EFE87857.1| ribosomal RNA small subunit methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 222

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L +   +  +++LD+GTG G + + L   +   + VG+DI  + ++ A      N 
Sbjct: 33  LFNYLNKSLSKRNIKLLDIGTGNGVLPILLSDNAMIEEIVGIDIQNENIQRANKALELNK 92

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGID 201
           + +  +    D         FDV++SNPPY+E         E +     + +++L     
Sbjct: 93  IEKNINFTSLDVKEYKNANYFDVVISNPPYMEDNGKKINENEHKALSRHEIKLNL----- 147

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                        R L   G        ++ V++++  +  K  +   
Sbjct: 148 -----EEFIQNAKRLLKPIGTLYFIHRTHRLVEIIKTLDENKFSIKKI 190


>gi|261335603|emb|CBH18597.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 274

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 40/197 (20%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----------- 116
            ++ +EP  +T LL++ AL      +      R +++G G+G V   L+           
Sbjct: 25  RTNVYEPEADTFLLLE-ALDKDAHLLRALQPRRCVEIGCGSGTVISHLMLLLLGATEGGN 83

Query: 117 -----KESPFFKGVGVDISCKALE---IAKSNAVTNGVSER----FDTLQSDWFSSVEG- 163
                 E    +   VD++  ALE   I   N     +           + D FS  E  
Sbjct: 84  LGSGSAEKSTAEFHAVDVNPVALEATSITWHNTQKRIIGGDTILPLHLHRGDLFSPFEHE 143

Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                           FDVI+ NPPY+ + + +    E        +  GG  G      
Sbjct: 144 ASDITEYTKEEKEEFTFDVILFNPPYVPTTMEELQSAEAGKDLITAAWCGGPRGRVVVDR 203

Query: 209 IADGVSRHLNKDGLCSV 225
               +   L+  G+C +
Sbjct: 204 FISKLPSFLSSRGVCYI 220


>gi|158300807|ref|XP_320636.4| AGAP011889-PA [Anopheles gambiae str. PEST]
 gi|157013339|gb|EAA00148.4| AGAP011889-PA [Anopheles gambiae str. PEST]
          Length = 476

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 19/159 (11%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-- 111
           RDF  ++L L  D   P    R      ++     +    E++  VR +D+G G   +  
Sbjct: 61  RDF-GLKLELPPDKLVPTLPLRLNYIHWLEDIGTVARWEQERKQPVRGIDIGCGASCIYP 119

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT----------LQSDWFSSV 161
            LA+++ +  +  V ++ +  ++E AK+N   N +    +           L        
Sbjct: 120 LLAVVQSNKHWHMVAIEKAQDSVESAKANVARNELQSCIEVKPQKLEGSTILLDVLEDFP 179

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEV--RDFDPRISLDG 198
              FD  + NPP+ +S   +    +   +  +P  +  G
Sbjct: 180 NERFDFCMCNPPFYDSGAKELKPQDRTGKRREPSNASTG 218


>gi|331654038|ref|ZP_08355039.1| hypothetical protein ECJG_02346 [Escherichia coli M718]
 gi|331048887|gb|EGI20963.1| hypothetical protein ECJG_02346 [Escherichia coli M718]
          Length = 285

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+GTG+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGTGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWVTQQTARFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNSFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|304410565|ref|ZP_07392183.1| Methyltransferase type 11 [Shewanella baltica OS183]
 gi|307304658|ref|ZP_07584408.1| Methyltransferase type 11 [Shewanella baltica BA175]
 gi|304351049|gb|EFM15449.1| Methyltransferase type 11 [Shewanella baltica OS183]
 gi|306912060|gb|EFN42484.1| Methyltransferase type 11 [Shewanella baltica BA175]
          Length = 238

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 15/163 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+G G+G + L +  +        V++   A E  + N   +  + R  
Sbjct: 29  WAQLTAAKTVLDIGAGSGLLSL-MAAQRSQAHITSVELDTSAAEACQHNFHNSPWANRLT 87

Query: 152 TLQS---DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + S   D+   +E    FD I+ NPPY E                  ++    D LS  
Sbjct: 88  LVNSSIQDFCQHIEYQEYFDHIICNPPYFEQGTQAIQSQ--------RAMARHTDSLSFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             + D +   L   G  S+ +          I     L L+  
Sbjct: 140 -ALLDAIHVCLAPQGNASLILPMQSMERFNEILAHSPLSLIEI 181


>gi|15901380|ref|NP_345984.1| hypothetical protein SP_1536 [Streptococcus pneumoniae TIGR4]
 gi|111658379|ref|ZP_01409066.1| hypothetical protein SpneT_02000458 [Streptococcus pneumoniae
           TIGR4]
 gi|221232247|ref|YP_002511400.1| hypothetical protein SPN23F_14990 [Streptococcus pneumoniae ATCC
           700669]
 gi|225854976|ref|YP_002736488.1| methyltransferase [Streptococcus pneumoniae JJA]
 gi|307127744|ref|YP_003879775.1| methyltransferase [Streptococcus pneumoniae 670-6B]
 gi|14973025|gb|AAK75624.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
 gi|220674708|emb|CAR69281.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
 gi|225722822|gb|ACO18675.1| methyltransferase [Streptococcus pneumoniae JJA]
 gi|306484806|gb|ADM91675.1| methyltransferase [Streptococcus pneumoniae 670-6B]
 gi|332074291|gb|EGI84768.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17545]
          Length = 249

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 NPYSNLNESEHYLLARHEITTNL----------EEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLKRHNL 191


>gi|163848559|ref|YP_001636603.1| methyltransferase small [Chloroflexus aurantiacus J-10-fl]
 gi|222526494|ref|YP_002570965.1| methyltransferase small [Chloroflexus sp. Y-400-fl]
 gi|163669848|gb|ABY36214.1| methyltransferase small [Chloroflexus aurantiacus J-10-fl]
 gi|222450373|gb|ACM54639.1| methyltransferase small [Chloroflexus sp. Y-400-fl]
          Length = 207

 Score = 75.9 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 51/154 (33%), Gaps = 28/154 (18%)

Query: 82  VDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +D      L  IE    +  RILD+G G G + + L +  P      VD    A+  A+ 
Sbjct: 39  IDEGTDLLLRLIEPAFPEPQRILDVGCGCGVIGICLARRFPQADVTLVDKDLLAVRYARH 98

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           NA  N  +            +  G +D+IVSN   I + I D         +P       
Sbjct: 99  NAELNATTNVTVLGSVGLSEAPPGPYDLIVSN---IPAKIGDYAIEHEFILEPL------ 149

Query: 200 IDGLSHYRTIADGVSRHLNKDG--LCSVEIGYNQ 231
                          RHL   G     V  G N 
Sbjct: 150 ---------------RHLRPGGEYWFVVVSGLNH 168


>gi|296133941|ref|YP_003641188.1| ribosomal protein L11 methyltransferase [Thermincola sp. JR]
 gi|296032519|gb|ADG83287.1| ribosomal protein L11 methyltransferase [Thermincola potens JR]
          Length = 311

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 46/188 (24%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEKRD 97
                 R   ++ +  S +   P P  +++V+              + L         R+
Sbjct: 116 AYYKPVRVGRSILIKPSWEEVIPAPG-DIIVELDPGMAFGTGTHATTVLCLEFLEDIIRE 174

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+GTG+G + +   K     + V +DI   A+ +A+ NA  NGV+ + +    D 
Sbjct: 175 GHKVYDVGTGSGILAITGAKL--GAEVVSIDIDEVAVRVARENAALNGVAAKVEVKLGDL 232

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            +      D++V+N                      ++           + +       L
Sbjct: 233 LAGETEPADIVVAN---------------------IVA--------DVIKEVIPQAKEKL 263

Query: 218 NKDGLCSV 225
              GL  V
Sbjct: 264 KDSGLLLV 271


>gi|229013532|ref|ZP_04170666.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides DSM
           2048]
 gi|228747769|gb|EEL97638.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides DSM
           2048]
          Length = 312

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +  +  
Sbjct: 172 TVHPGDTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDDIVNVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      IG  +KV +    E+    +    +
Sbjct: 262 ARVVKPGGLFITSGIIGAKEKV-ISEALETAGFSIEEVLR 300


>gi|50955207|ref|YP_062495.1| hypothetical protein Lxx15950 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951689|gb|AAT89390.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 203

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 10/132 (7%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFF 122
            L  +S  F P       +D      L  +       + LDLG G G + L L  ESP  
Sbjct: 31  ELVTASGIFSPER-----IDMGTRVLLDHVPPAPPSGQFLDLGCGWGPLALTLALESPHA 85

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               VD++ +AL++ + NA   G+              +E  F  I SNPP    V  + 
Sbjct: 86  TVWAVDVNTRALDVVRRNAEKLGLKNVNPVTPDRVPDGLE--FTTIWSNPPI--RVGKNE 141

Query: 183 LGLEVRDFDPRI 194
           L   ++ + PR+
Sbjct: 142 LHTILKRWLPRL 153


>gi|70606601|ref|YP_255471.1| hypothetical protein Saci_0810 [Sulfolobus acidocaldarius DSM 639]
 gi|68567249|gb|AAY80178.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
          Length = 187

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 29/171 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   +   + D+G G G + + +   +   K   +D+  KA+     N  
Sbjct: 31  DLGTRILLENLVLPNHGIVADIGCGYGPIGIYIALVNQNLKVYMIDVDKKAIYFTSKNVS 90

Query: 143 TNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              +S R   ++S+ F +V     F+ I SNPP                      L  G 
Sbjct: 91  KYNLSNRITVIKSNLFENVPNDLKFNGIYSNPP----------------------LKAGK 128

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                   +++   R L   G+  V + Y  + +V+  F    L  V  +K
Sbjct: 129 ---EFIERLSEEAGRRLEIGGIIEVVV-YKGEANVITEFSKF-LNEVKVYK 174


>gi|169344693|ref|ZP_02865656.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169297160|gb|EDS79274.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
          Length = 256

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + ++    +LDL TGTG +   +  +    + VG++I  +  E+A  +A
Sbjct: 40  VDAVLLANFANVNRKH--SVLDLCTGTGIIPFIIYGKKNPKEAVGIEIQEEFAEMANRSA 97

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N + ++   +  D      S     FDV+  NPPY            + + + ++++ 
Sbjct: 98  KINNIEDKVSFVCGDLKDKELSKSMPKFDVVTVNPPY------KLNNAGIVNPEDKLAIA 151

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                + +   +     R L  +G   +     +  D+  +    K+      
Sbjct: 152 RHEI-MCNLEDVIAASRRFLKDNGRLYMVHRPERLADIFCLMRKYKIEPKRVR 203


>gi|326789154|ref|YP_004306975.1| methyltransferase small [Clostridium lentocellum DSM 5427]
 gi|326539918|gb|ADZ81777.1| methyltransferase small [Clostridium lentocellum DSM 5427]
          Length = 253

 Score = 75.5 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 27/194 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +L  + + F    +  LL   A              ++LD+GTGTG + + +      
Sbjct: 20  GYKLIQNPEVFCFGIDAILLAHFA-------KVNNQRQKVLDIGTGTGIIPIVMHAIYGK 72

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               G+DI  + +E+A  +   N +         D     E    G FD+I  NPPY++ 
Sbjct: 73  GHFTGIDIQEEMIEMASRSVKLNEIDTDVTMKVMDIKDYKEHFSTGYFDIITCNPPYMKG 132

Query: 178 VI---VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                 +     +   +   +L            I    S  L   G   +     +   
Sbjct: 133 HAGLKNEHPSKTIARHEVACTL----------EDIISATSYMLKYGGKMCMIH---RPHR 179

Query: 235 VVRIFESRKLFLVN 248
           +V IF + + + + 
Sbjct: 180 LVDIFATMRQYNIE 193


>gi|213691917|ref|YP_002322503.1| Methylase of polypeptide chain release factors-like protein
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|213523378|gb|ACJ52125.1| Methylase of polypeptide chain release factors-like protein
           [Bifidobacterium longum subsp. infantis ATCC 15697]
 gi|320458019|dbj|BAJ68640.1| hypothetical protein BLIJ_1052 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 378

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 24/157 (15%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           ALA  L     R+   +LD   G G     LL  S       V+++  A E++  NA  N
Sbjct: 133 ALACRLGTAPSRNN--VLDYCAGPGIQG--LLSASHGAHVTAVEVNPLASELSLCNARLN 188

Query: 145 GVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            +   F+ +      S        FD I +NPP +             ++ P +  DGG 
Sbjct: 189 KLDNLFNVINKSVIESETDLKNLRFDFICANPPLLP-------IPFNLNY-PFVG-DGGT 239

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV-------EIGYN 230
           DGLS +R I +    HL+++G           E+G +
Sbjct: 240 DGLSIFRQIMNYGIPHLSRNGKIVTLGLSGGSEVGPD 276


>gi|74026042|ref|XP_829587.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834973|gb|EAN80475.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 274

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 40/197 (20%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----------- 116
            ++ +EP  +T LL++ AL      +      R +++G G+G V   L+           
Sbjct: 25  RTNVYEPEADTFLLLE-ALDKDAHLLRALQPRRCVEIGCGSGTVISHLMLLLLGATEGGN 83

Query: 117 -----KESPFFKGVGVDISCKALE---IAKSNAVTNGVSER----FDTLQSDWFSSVEG- 163
                 E    +   VD++  ALE   I   N     +           + D FS  E  
Sbjct: 84  LGSGSAEKSTAEFHAVDVNPVALEATSITWHNTQKRIIGGDTILPLHLHRGDLFSPFEHE 143

Query: 164 ---------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                           FDVI+ NPPY+ + + +    E        +  GG  G      
Sbjct: 144 ASDITEYTKEEKEEFTFDVILFNPPYVPTTMEELQSAEAGKDLITAAWCGGPRGRVVVDR 203

Query: 209 IADGVSRHLNKDGLCSV 225
               +   L+  G+C +
Sbjct: 204 FISKLPSFLSSRGVCYI 220


>gi|312875625|ref|ZP_07735626.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2053A-b]
 gi|311088879|gb|EFQ47322.1| ribosomal protein L11 methyltransferase [Lactobacillus iners LEAF
           2053A-b]
          Length = 310

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +    K    DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASKVCATDISDDAIVSAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G +D+I++N                      ++             +   +S HL ++
Sbjct: 234 VNGKYDLILAN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GSVIMSGIDCEQLSRIEKLLSENGFT 290


>gi|171684871|ref|XP_001907377.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942396|emb|CAP68048.1| unnamed protein product [Podospora anserina S mat+]
          Length = 252

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 68/186 (36%), Gaps = 31/186 (16%)

Query: 71  TFEPRPETELLVDSA-----LAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKE------ 118
            +EP  ++ LL+D+      L F             +L++G G+G V   L         
Sbjct: 15  VYEPAEDSFLLLDTLSSPTSLTFHTSHFPPSSPTPLVLEIGPGSGVVLAFLTAHANHIFS 74

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSN 171
            P    +G+DI+  A                         +Q D  S + G   DV+V N
Sbjct: 75  RPDILTLGIDINSFACASTAKTVSLASQDHPTTSGEFLSAVQGDLTSCLRGRQVDVLVFN 134

Query: 172 PPYIESVIVDCLGLEVRD-------FDPRISL-----DGGIDGLSHYRTIADGVSRHLNK 219
           PPY+ +  +  L   +R+       F+    L      GG DG+     + D +   L++
Sbjct: 135 PPYVPTEDLPALPERLREKKEGKVTFEEESKLLELSYAGGKDGMETTDRVIDSLGDVLSE 194

Query: 220 DGLCSV 225
            G+  +
Sbjct: 195 RGVAYL 200


>gi|148988582|ref|ZP_01820015.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP6-BS73]
 gi|148997401|ref|ZP_01825006.1| hypothetical protein CGSSp11BS70_00897 [Streptococcus pneumoniae
           SP11-BS70]
 gi|149011774|ref|ZP_01832970.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP19-BS75]
 gi|168487506|ref|ZP_02712014.1| methyltransferase [Streptococcus pneumoniae CDC1087-00]
 gi|168575268|ref|ZP_02721231.1| methyltransferase [Streptococcus pneumoniae MLV-016]
 gi|169834069|ref|YP_001694941.1| methyltransferase [Streptococcus pneumoniae Hungary19A-6]
 gi|182684492|ref|YP_001836239.1| hypothetical protein SPCG_1522 [Streptococcus pneumoniae CGSP14]
 gi|225857162|ref|YP_002738673.1| methyltransferase [Streptococcus pneumoniae P1031]
 gi|225859291|ref|YP_002740801.1| methyltransferase [Streptococcus pneumoniae 70585]
 gi|303255322|ref|ZP_07341392.1| hypothetical protein CGSSpBS455_07568 [Streptococcus pneumoniae
           BS455]
 gi|303260163|ref|ZP_07346135.1| hypothetical protein CGSSp9vBS293_05012 [Streptococcus pneumoniae
           SP-BS293]
 gi|303262553|ref|ZP_07348494.1| hypothetical protein CGSSp14BS292_09837 [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264955|ref|ZP_07350870.1| hypothetical protein CGSSpBS397_09428 [Streptococcus pneumoniae
           BS397]
 gi|303266418|ref|ZP_07352306.1| hypothetical protein CGSSpBS457_07396 [Streptococcus pneumoniae
           BS457]
 gi|303269406|ref|ZP_07355176.1| hypothetical protein CGSSpBS458_05719 [Streptococcus pneumoniae
           BS458]
 gi|307068180|ref|YP_003877146.1| putative O-methyltransferase [Streptococcus pneumoniae AP200]
 gi|147756456|gb|EDK63497.1| hypothetical protein CGSSp11BS70_00897 [Streptococcus pneumoniae
           SP11-BS70]
 gi|147764205|gb|EDK71137.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP19-BS75]
 gi|147925783|gb|EDK76858.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP6-BS73]
 gi|168996571|gb|ACA37183.1| methyltransferase [Streptococcus pneumoniae Hungary19A-6]
 gi|182629826|gb|ACB90774.1| hypothetical protein SPCG_1522 [Streptococcus pneumoniae CGSP14]
 gi|183569677|gb|EDT90205.1| methyltransferase [Streptococcus pneumoniae CDC1087-00]
 gi|183578745|gb|EDT99273.1| methyltransferase [Streptococcus pneumoniae MLV-016]
 gi|225720462|gb|ACO16316.1| methyltransferase [Streptococcus pneumoniae 70585]
 gi|225725402|gb|ACO21254.1| methyltransferase [Streptococcus pneumoniae P1031]
 gi|301802254|emb|CBW35006.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597690|gb|EFL64766.1| hypothetical protein CGSSpBS455_07568 [Streptococcus pneumoniae
           BS455]
 gi|302636270|gb|EFL66764.1| hypothetical protein CGSSp14BS292_09837 [Streptococcus pneumoniae
           SP14-BS292]
 gi|302638660|gb|EFL69123.1| hypothetical protein CGSSpBS293_05012 [Streptococcus pneumoniae
           SP-BS293]
 gi|302641074|gb|EFL71451.1| hypothetical protein CGSSpBS458_05719 [Streptococcus pneumoniae
           BS458]
 gi|302643996|gb|EFL74255.1| hypothetical protein CGSSpBS457_07396 [Streptococcus pneumoniae
           BS457]
 gi|302645474|gb|EFL75706.1| hypothetical protein CGSSpBS397_09428 [Streptococcus pneumoniae
           BS397]
 gi|306409717|gb|ADM85144.1| Predicted O-methyltransferase [Streptococcus pneumoniae AP200]
 gi|332073874|gb|EGI84352.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41301]
 gi|332199581|gb|EGJ13656.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA41317]
 gi|332200977|gb|EGJ15048.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47901]
          Length = 249

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 DPYSNLNESEHYLLARHEITTNL----------EEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLKRHNL 191


>gi|134098368|ref|YP_001104029.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338]
 gi|291006930|ref|ZP_06564903.1| rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL 2338]
 gi|133910991|emb|CAM01104.1| probable rRNA/tRNA methylase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 505

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 15/147 (10%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L V  A    +    +R V  +LDLGTG G   L     +   +    D+S +AL 
Sbjct: 135 PDHVLGVGHASLSLVRATSRRPVGSVLDLGTGCGVQALHASTHAE--RVTATDVSKRALA 192

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +A +    N V    +  + +WF  V G  FD IV NPP++       +G    DF  R 
Sbjct: 193 LADATFRLNRVD--VELAEGEWFEPVRGRRFDQIVCNPPFV-------VGPARTDFTYR- 242

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDG 221
             D G+ G      +   +   L + G
Sbjct: 243 --DSGLAGDDASALVVRQLPSLLEEGG 267


>gi|148271333|ref|YP_001220894.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829263|emb|CAN00175.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 407

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 23/140 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP +       + DLG GTG +  A+    P  + +  D S  A++ A++    NG
Sbjct: 249 LLSFLPDLPAGAATAV-DLGCGTGVIASAVALARPDLRLIATDQSWAAVDSARATVAANG 307

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +++R   ++ D  S+V +G  D+++ NPP+     V                     GL+
Sbjct: 308 LADRVTVVRDDAGSTVPDGSADLVLLNPPFHTGATVHA-------------------GLA 348

Query: 205 HYRTIADGVSRHLNKDGLCS 224
               +    +R L   G   
Sbjct: 349 P--RLFAAAARMLRPGGQLW 366


>gi|20804044|emb|CAD31621.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
          Length = 226

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 17/167 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + L +    + P+            +        +   IL++G G G   L L K   
Sbjct: 26  FGLDLAVHEGVYPPQDFHS------WRWYTDNFPPVEGKSILEIGCGFGLPGLYLAK-LG 78

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
               V  DI  KA+  A  NA  NG+    + ++SD F++V     FD I  N P + + 
Sbjct: 79  AASLVACDIDPKAVANALENAARNGIK-NVEVIESDIFTNVPPHRKFDFIFWNYPSVFAP 137

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   +     R ++D G  GL           + L + G   +
Sbjct: 138 DDYQYEDNIE----RGAIDPGY-GLLC--RYLSEGPKFLTEAGSILL 177


>gi|261403896|ref|YP_003240137.1| methyltransferase small [Paenibacillus sp. Y412MC10]
 gi|261280359|gb|ACX62330.1| methyltransferase small [Paenibacillus sp. Y412MC10]
          Length = 255

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 26/174 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +  S + F    +  LL   A              RILD+ TG G + + LL    
Sbjct: 20  HELGIIQSEEVFSFSMDAVLLARFA--------SIPRRGRILDMCTGNGVIPI-LLSTRT 70

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
                G++I  +  ++A+ + V N + ++    + D     +      +D+I  NPPY+ 
Sbjct: 71  GAPIEGIEIQPRLADMARRSVVMNDLQDQITIHEGDLRELYKEKGYGAYDLITVNPPYMP 130

Query: 177 SVIVDC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               D        +   +   +L            + +  +R L + G  S+  
Sbjct: 131 MNGSDLKLNEHQAIARHEIHCTL----------EEVIESCARLLKQGGKMSMVH 174


>gi|71029116|ref|XP_764201.1| DNA-methyltransferase [Theileria parva strain Muguga]
 gi|68351155|gb|EAN31918.1| DNA-methyltransferase, putative [Theileria parva]
          Length = 193

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 17/167 (10%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-----PFFK 123
              + P  +T   VD+ L      I   + V IL+LG G+G +   +L            
Sbjct: 17  KSVYIPSEDTFFFVDT-LHKDFHNISTLNPVLILELGCGSGYISTYILNLFLTDVNKPGH 75

Query: 124 GVGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
            + + IS     +A  +     ++N V+   + +  D F+++    FD+I+ NPPY+   
Sbjct: 76  IIPMCISTDINPLACLSTSQMIMSNKVNNYSECICMDLFNNLTNFKFDIILFNPPYVVGD 135

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +   + +  R      + +GGI+G        + VS +++  G   +
Sbjct: 136 LEGSIDMIDR------AWNGGINGSETIVKFINSVSGYISAGGYVYL 176


>gi|296241773|ref|YP_003649260.1| methyltransferase small [Thermosphaera aggregans DSM 11486]
 gi|296094357|gb|ADG90308.1| methyltransferase small [Thermosphaera aggregans DSM 11486]
          Length = 160

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG+GTG V   LL        V VD+   AL  +K     N +S R     +   +  
Sbjct: 3   VDLGSGTGIVGSHLLSNGYCELAVLVDVMEDALTSSKMTLEVNNLSSR-GITITSVEALG 61

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           +G  D++VSNPPY+ +     +          I+ +GG+ G           SR L + G
Sbjct: 62  DGSVDMVVSNPPYLPAHAPSEID---------IATEGGVKGYETIAYFIKESSRVLKQGG 112

Query: 222 LCSVEIGYNQKVDVVR-IFESRKLFLVNA 249
              +         VV  +        +  
Sbjct: 113 QLFLVYSSLTGEKVVESLLAENGFVKIKT 141


>gi|156932882|ref|YP_001436798.1| hypothetical protein ESA_00683 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531136|gb|ABU75962.1| hypothetical protein ESA_00683 [Cronobacter sakazakii ATCC BAA-894]
          Length = 256

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G G+G + L L + +        V++  +A E A+ N   +  + R 
Sbjct: 50  WAPVAKAQRVLDIGAGSGLLTLMLAQRTEDTVTLDAVELDAQAAEQARENIDASPWAARI 109

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D           +++IVSNPPY +  +       E   +    +LD G       
Sbjct: 110 QVHSADIQTWTQQQTQRYELIVSNPPYYDKGVACATPAREQARY--TTTLDHG------- 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            T+    ++ + ++G   V +  +      R+   +   L     D   N      RVLL
Sbjct: 161 -TLLACAAQLITEEGFFCVVLPESSGEAFSRLAGEQGWHL-RLRTDVAENAGKLPHRVLL 218

Query: 262 F 262
            
Sbjct: 219 A 219


>gi|161528888|ref|YP_001582714.1| methylase [Nitrosopumilus maritimus SCM1]
 gi|160340189|gb|ABX13276.1| putative methylase [Nitrosopumilus maritimus SCM1]
          Length = 178

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 39/192 (20%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D + P  +T  + ++        IE  +    LD+G+G+G   L  L    F   VG DI
Sbjct: 9   DEYPPSEDTFFIAEN--------IENENGEYALDIGSGSGY--LTKLLSENFSLVVGTDI 58

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +C  L             +  + +  +   +++  FD IV N PY+ +  +  +      
Sbjct: 59  NCDVL-------QHQSSYKTQNLICCNGSDALKVKFDFIVCNLPYLATDEILDI------ 105

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--------E--IGYNQKVDVV-RI 238
                + DGG +G    + I D    +L K+G            E  I Y QK+ +  RI
Sbjct: 106 -----ATDGGAEGFEIPKKIFDSAKNNLKKNGKFVFVTSSLSNYEKLIDYAQKLGLKTRI 160

Query: 239 FESRKLFLVNAF 250
              +KLF     
Sbjct: 161 MAKKKLFFEELI 172


>gi|307705997|ref|ZP_07642820.1| methyltransferase small domain protein [Streptococcus mitis SK564]
 gi|307620416|gb|EFN99529.1| methyltransferase small domain protein [Streptococcus mitis SK564]
          Length = 249

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+ + +  D     S ++G   D+I+ NPPY + 
Sbjct: 71  AQILAVEIQERLADMAERSVRLNGLEEQMEVICDDLKNMPSRIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------QEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLQRHNL 191


>gi|288554640|ref|YP_003426575.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4]
 gi|288545800|gb|ADC49683.1| hypothetical protein BpOF4_08125 [Bacillus pseudofirmus OF4]
          Length = 246

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 20/158 (12%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           + E I  I G     ++++  S   F    +  LL       +           ILDL +
Sbjct: 6   QDERIDYIAGT----DLKVIQSPSVFSFSIDAILL-------ARFTYLPIQKGNILDLCS 54

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVE 162
           G G + L L          GV+I  +  ++A+ N   N ++++     +D      S  +
Sbjct: 55  GNGVIPLVL-STRTKATITGVEIQERLWDMARRNEELNKLNQQLHFELADLNHLPPSIKK 113

Query: 163 GLFDVIVSNPPYIESVIVDC----LGLEVRDFDPRISL 196
           G FDV+  NPPY E+V  +     L L +   +   SL
Sbjct: 114 GSFDVVTCNPPYFETVSEEEKNKNLHLAIARHEIHCSL 151


>gi|56421037|ref|YP_148355.1| ribosomal protein L11 methyltransferase [Geobacillus kaustophilus
           HTA426]
 gi|81819664|sp|Q5KWZ9|PRMA_GEOKA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|56380879|dbj|BAD76787.1| ribosomal protein L11 methyltransferase [Geobacillus kaustophilus
           HTA426]
          Length = 312

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 67/218 (30%), Gaps = 54/218 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+  Y+         +  + +T+EP    EL+++     +            L  +EK
Sbjct: 112 TAWKKHYHPVKVSEKFTIVPTWETYEPASRDELIIEMDPGMAFGTGTHPTTVMCLQALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 172 YVRPGDHVIDVGTGSGILSIAAAMLGAQS-VRALDLDPVAVDSARLNVKLNKVQHIVTVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +E   DVIV+N                      ++                  
Sbjct: 231 QNNLLDHIEEPADVIVAN---------------------ILA--------EIILRFTGDA 261

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNA 249
            R L   G      G  Q    DV     +    +   
Sbjct: 262 YRLLKPGGRFIT-SGIIQAKKQDVKDGLLAAGFAIEEI 298


>gi|290890963|ref|ZP_06554027.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429]
 gi|290479362|gb|EFD88022.1| hypothetical protein AWRIB429_1417 [Oenococcus oeni AWRIB429]
          Length = 204

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 36/197 (18%)

Query: 60  FYNVR--LTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           F          +  F + R +  T++L+++         ++    +ILDLGTG G V ++
Sbjct: 26  FAGRELIFKTDAGVFSKLRVDFGTKVLLETIH----SHFQELPDGKILDLGTGYGPVGIS 81

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L    P  K   VD++ ++L +AK+N   N  S      QS+ + +V G +  I+ NPP 
Sbjct: 82  LKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSANV--FQSNIYENVTGSYAAIIVNPPI 139

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                                      G +    +     +HL   G+    +   Q   
Sbjct: 140 RA-------------------------GKTVVTKMLVESKKHLINGGIILAVLQKKQGAP 174

Query: 235 VVRIFESRKLFLVNAFK 251
                       V   K
Sbjct: 175 SAERNLKNTFENVEILK 191


>gi|145632668|ref|ZP_01788402.1| predicted O-methyltransferase [Haemophilus influenzae 3655]
 gi|229846509|ref|ZP_04466617.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1]
 gi|262831319|sp|Q4QNC1|TRMN6_HAEI8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|144986863|gb|EDJ93415.1| predicted O-methyltransferase [Haemophilus influenzae 3655]
 gi|229810602|gb|EEP46320.1| predicted O-methyltransferase [Haemophilus influenzae 7P49H1]
          Length = 232

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLTQADIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y+    + +
Sbjct: 141 --WLEWAATRLSENGKISFVLPYDAGKTLTK 169


>gi|68249024|ref|YP_248136.1| O-methyltransferase [Haemophilus influenzae 86-028NP]
 gi|68057223|gb|AAX87476.1| predicted O-methyltransferase [Haemophilus influenzae 86-028NP]
          Length = 240

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 38  WADVKHCKNILDMGSGTGLLTLMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 97

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLTQADIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y+    + +
Sbjct: 149 --WLEWAATRLSENGKISFVLPYDAGKTLTK 177


>gi|301631447|ref|XP_002944809.1| PREDICTED: hypothetical protein LOC100484995 [Xenopus (Silurana)
           tropicalis]
          Length = 555

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +        P     VD      LP +     +   D+G GTG +  ALL      + V
Sbjct: 298 RIHPHYGVFSPVRGEYVDLVAQAPLPPLSDGYALAF-DIGVGTGVLS-ALLVRRGVARVV 355

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             D   +AL  A+ N     +  +   LQ+D F    G   ++V NPP++ +     L  
Sbjct: 356 ATDQEPRALACAQDNLRRLCLLPQVQLLQADLFPP--GQAALVVCNPPWLPARASSALER 413

Query: 186 EVRDFD 191
            V   +
Sbjct: 414 AVPLIE 419


>gi|325912589|ref|ZP_08174972.1| ribosomal protein L11 methyltransferase [Lactobacillus iners UPII
           60-B]
 gi|325478010|gb|EGC81139.1| ribosomal protein L11 methyltransferase [Lactobacillus iners UPII
           60-B]
          Length = 310

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 54/146 (36%), Gaps = 32/146 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+GTG+G + + +  +         DIS  A+  AK N   N + +  +  Q++  + 
Sbjct: 176 VLDVGTGSGILSI-VASKFGASNVCATDISDDAIASAKKNLALNDI-DNVELKQANLLTG 233

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+G +D+I+ N                      ++             +   +S HL ++
Sbjct: 234 VKGKYDLILVN---------------------MLA--------EILYQLIPHLSDHLARN 264

Query: 221 GLCSV-EIGYNQKVDVVRIFESRKLF 245
           G   +  I   Q   + ++       
Sbjct: 265 GSVIMSGIDCEQLSRIEKLLSENGFT 290


>gi|322391662|ref|ZP_08065130.1| methyltransferase [Streptococcus peroris ATCC 700780]
 gi|321145473|gb|EFX40866.1| methyltransferase [Streptococcus peroris ATCC 700780]
          Length = 249

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASSRTK 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   N + E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AKILSVEIQERLADMAERSVRLNSLEEQMRVICDDLKNMPNHLQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I     + L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------EEICRSAQKILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILATLQQHNL 191


>gi|229062010|ref|ZP_04199336.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH603]
 gi|228717319|gb|EEL68992.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH603]
          Length = 312

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +  +  
Sbjct: 172 TVQPGDTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDDIVNVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      IG  +KV +    E+    +    +
Sbjct: 262 ARVVKPGGLFITSGIIGAKEKV-ISEALETAGFSIEEVLR 300


>gi|327451474|gb|EGE98128.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA3]
          Length = 206

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +  P    V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSDGTFLDLGCGYGPIACALARACPGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I S PP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSTPP--------IRVGKAALHEILTTW---------LTRLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|293192305|ref|ZP_06609416.1| putative methyltransferase small domain protein [Actinomyces
           odontolyticus F0309]
 gi|292820220|gb|EFF79214.1| putative methyltransferase small domain protein [Actinomyces
           odontolyticus F0309]
          Length = 204

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 30/198 (15%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++ + +SS  F   +    T  L++ A        +  +    LDLG G G +   +  
Sbjct: 27  FDLSMRVSSRVFSGSKLDLGTRQLLEIA-------PDLPEDGTFLDLGCGWGPIATIMSL 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPP 173
           ESP      VD++ +A+++ + NA +NG       L+++         +  FDVI SNPP
Sbjct: 80  ESPNADVWAVDVNSRAVDLTQRNAQSNGAKG-VRALKAEEALTSSQESDTRFDVIWSNPP 138

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQK 232
               V  D +   +  +  R++  G    L   R + AD +   LN            Q 
Sbjct: 139 V--RVGKDAMHEMLLAWLGRLAPTGVAY-LVVQRNLGADSLITWLN-----------GQG 184

Query: 233 VDVVRIFESRKLFLVNAF 250
               +    +   ++   
Sbjct: 185 FQASKYASKKGFRIIEVR 202


>gi|253581068|ref|ZP_04858328.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847604|gb|EES75574.1| methyltransferase type 11 [Ruminococcus sp. 5_1_39BFAA]
          Length = 246

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     +++K +    LDLGTGTG + + L  ++      G++I  +  ++A  + 
Sbjct: 32  MDAVLLSGFAKVKKGETA--LDLGTGTGIIPILLKTKTNGKHFTGLEIQKECADMAGRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + +  + ++ D   + +      FDV+ SNPPY+     +    +   +   +   
Sbjct: 90  RYNHLEDDVEIVRGDIKEAADIFGAASFDVVTSNPPYMIGQHGLRNSDMPKAIARHEVLC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L            +    S+ L + G   +  
Sbjct: 150 NL----------EDVVSQASKVLKERGRFYMVH 172


>gi|260891354|ref|ZP_05902617.1| methyltransferase domain protein [Leptotrichia hofstadii F0254]
 gi|260858737|gb|EEX73237.1| methyltransferase domain protein [Leptotrichia hofstadii F0254]
          Length = 208

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 29/145 (20%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV----SER 149
           +K     +LD+G G G V + +       K V  D++ +ALE+   N + N V    ++ 
Sbjct: 59  KKNQKFEVLDIGCGYGVVSVVMKAFFQKIKTVSSDVNERALELTTENLLKNEVVKDENDD 118

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           F+  +S  F ++   FDVI+SNPP                                   I
Sbjct: 119 FEVRKSFVFDNISEKFDVILSNPPIRAGKQT-------------------------IFQI 153

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVD 234
            +    HLN++G     I       
Sbjct: 154 YEQSFEHLNENGEFYCVIQTKHGAK 178


>gi|15613912|ref|NP_242215.1| ribosomal protein L11 methyltransferase [Bacillus halodurans C-125]
 gi|38605487|sp|Q9KD70|PRMA_BACHD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|10173965|dbj|BAB05068.1| methyltransferase [Bacillus halodurans C-125]
          Length = 313

 Score = 75.5 bits (185), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 36/175 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T +L   AL   +   E      ++D+GTG+G + +A  K     + +G+D+   A++ 
Sbjct: 159 PTTVLCIQALENVIQGGES-----VIDVGTGSGVLSIAAAK-LGASEVLGLDLDEVAVKS 212

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ N   N V  +    Q+     + G  DVIV+N                      ++ 
Sbjct: 213 AQMNVKLNKVHRQVMVRQNHLLEGITGTRDVIVAN---------------------ILA- 250

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                               L   G   V  I   +K DV     +    +    
Sbjct: 251 -------EVIIRFVADAKAVLKPGGTFIVSGIIKRKKNDVKDALVTNGFQIEETV 298


>gi|152971431|ref|YP_001336540.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|262040310|ref|ZP_06013561.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330007679|ref|ZP_08306018.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3]
 gi|262828519|sp|A6TCI9|TRMN6_KLEP7 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|150956280|gb|ABR78310.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|259042419|gb|EEW43439.1| SAM-dependent methyltransferase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328535360|gb|EGF61842.1| methyltransferase small domain protein [Klebsiella sp. MS 92-3]
          Length = 245

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V  +LD+G G+G + L L + +        V++  +A   A+ NA+ +  + R 
Sbjct: 39  WAPIAGVKHVLDIGAGSGLLALMLAQRTGDDVHVEAVELDEEAAAQARENALASPWASRI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  Q+D   W  S    +++I+SNPP+    +       E   +    +LD        +
Sbjct: 99  EVWQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++    + H+ ++G   V +  +     +    +    L
Sbjct: 149 ASLLTCAAEHITEEGFFCVVLPVDIGNAFIERARAMGWHL 188


>gi|303244902|ref|ZP_07331228.1| protein of unknown function DUF890 [Methanothermococcus okinawensis
           IH1]
 gi|302484719|gb|EFL47657.1| protein of unknown function DUF890 [Methanothermococcus okinawensis
           IH1]
          Length = 286

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 37/200 (18%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLV---------------------DSALAFSLPRIEKR 96
           +  + + +    D   P P    L                      ++            
Sbjct: 47  KYLFGLNMEFHKDALIPTPINRYLFVKNVFENYNKDILNANNDIVKENVKNIKYDNNNHH 106

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +  +L++GTG+  + + + K          +   + + IA  N + N ++     + S+
Sbjct: 107 PIKTVLEIGTGSAIISIIMAKYY-HCNIYATETVKEYINIANENTLKNNLNNYIMVINSN 165

Query: 157 ------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-----GGIDGLSH 205
                   +     FD+I+S PP+ +S  V       R F    + D     GG  G   
Sbjct: 166 NKIIKGITNLTHKKFDLIISYPPFYDSNSV----PSKRSFGGAHATDIELIGGGKYGEEF 221

Query: 206 YRTIADGVSRHLNKDGLCSV 225
              I +    HLNK GL ++
Sbjct: 222 SLKIIEEGVNHLNKGGLIAL 241


>gi|86139017|ref|ZP_01057588.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193]
 gi|85824248|gb|EAQ44452.1| hypothetical protein MED193_10698 [Roseobacter sp. MED193]
          Length = 268

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 73/188 (38%), Gaps = 23/188 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   R+ L    ++PR      VD  L      I  R   R+L+LG G G   L L + 
Sbjct: 24  DFLGGRVQL----WQPREGYRAGVDPVL--LAAAIPARAGERVLELGCGGGQAFLCLAER 77

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
            P     GV++      +A+ NA  NG S   + +++D  +  +      FD +++NPPY
Sbjct: 78  VPGLAITGVELQSDYAVLARRNAAHNGQS--VEVVEADLAALPKDLRQRQFDQVLANPPY 135

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +          R    +I+L GG   L  +    D  +R L   G         +   
Sbjct: 136 YRAGAHSPAEDVGR----QIAL-GGDTPLEIW---IDTAARRLTHKGYL---HMIQRADR 184

Query: 235 VVRIFESR 242
           +  I  + 
Sbjct: 185 LPDILSAC 192


>gi|257466576|ref|ZP_05630887.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917731|ref|ZP_07913971.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691606|gb|EFS28441.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 242

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   +D F    ++ L+ +            +   +ILDLGTG  A+ L L  ++  
Sbjct: 13  GLKIIQRNDYFNFSLDSLLISEFIKI-------NKQSKKILDLGTGNAAIPLFLSLKT-T 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE- 176
            +  G++I   + ++A  N   N + E+   L  D  +  E      FD++VSNPP+ E 
Sbjct: 65  AQIYGLEIQKVSYDLAIKNIALNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFEF 124

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                ++ D   L +   +  I+L            +    S  + + G   +    ++ 
Sbjct: 125 HGNRELLNDLDQLTLARHEISITL----------EELIQVTSNLVKEHGYFYLVHRADRL 174

Query: 233 VDVVRIFESRKL 244
           VD++ +    KL
Sbjct: 175 VDILELCRKYKL 186


>gi|262831324|sp|A7MH06|TRMN6_ENTS8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G G+G + L L + +        V++  +A E A+ N   +  + R 
Sbjct: 39  WAPVAKAQRVLDIGAGSGLLTLMLAQRTEDTVTLDAVELDAQAAEQARENIDASPWAARI 98

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D           +++IVSNPPY +  +       E   +    +LD G       
Sbjct: 99  QVHSADIQTWTQQQTQRYELIVSNPPYYDKGVACATPAREQARY--TTTLDHG------- 149

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            T+    ++ + ++G   V +  +      R+   +   L     D   N      RVLL
Sbjct: 150 -TLLACAAQLITEEGFFCVVLPESSGEAFSRLAGEQGWHL-RLRTDVAENAGKLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|308273829|emb|CBX30430.1| hypothetical protein N47_Q17530 [uncultured Desulfobacterium sp.]
          Length = 248

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 13/144 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+N ++++  +    R      VDS L  S  +    D  ++LD+GTG G + L L   +
Sbjct: 17  FFNGKISIRQNKLGYRFS----VDSVLLASYVKSAAGD--KVLDIGTGCGIISLILAYRN 70

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI 175
           P  +  G+++     ++A  N   N + E+   + +D      S + G  D+IV NPPY 
Sbjct: 71  PGIEIYGIEVQKSLADLAALNVKNNCMEEQIKIVYTDVKNLKKSMLSGSPDIIVCNPPYR 130

Query: 176 ESVIVDCLGLEVR---DFDPRISL 196
           ++          R     +  ISL
Sbjct: 131 KANSGRVNPDNQRALARHEIMISL 154


>gi|127514158|ref|YP_001095355.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella loihica PV-4]
 gi|226712992|sp|A3QHZ8|RSMC_SHELP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|126639453|gb|ABO25096.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella loihica PV-4]
          Length = 342

 Score = 75.5 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 31/130 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK +P  +   VDI+  AL   +     NG+  +     SD  +
Sbjct: 204 RVLDFGCGAGVITAALLKANPDLELECVDINAMALASCELTLAANGMQAKV--YASDGLT 261

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIADGVSR 215
             +G+FD I+SNPP+                          DGL                
Sbjct: 262 QTQGMFDAIISNPPF-------------------------HDGLDSTTEIATRFVQESEA 296

Query: 216 HLNKDGLCSV 225
            L   G+  +
Sbjct: 297 QLKSGGIFQI 306


>gi|309750161|gb|ADO80145.1| Putative methyltransferase [Haemophilus influenzae R2866]
          Length = 240

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +      
Sbjct: 38  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHI 97

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 98  QLIQTDIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     +++
Sbjct: 149 --WLEWAATRLSENGRISFVLPYEAGKTLIK 177


>gi|145628789|ref|ZP_01784589.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae
           22.1-21]
 gi|145638667|ref|ZP_01794276.1| phosphatidylserine synthase [Haemophilus influenzae PittII]
 gi|144979259|gb|EDJ88945.1| hypothetical protein CGSHi22121_07225 [Haemophilus influenzae
           22.1-21]
 gi|145272262|gb|EDK12170.1| phosphatidylserine synthase [Haemophilus influenzae PittII]
          Length = 232

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 16/151 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +      
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNHI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
             +Q+D      + E  FD+IV+NPPY E  I       E+  +  +  L+         
Sbjct: 90  QLIQTDIQHFLQTTEQTFDLIVANPPYFEQGIACKNEERELARYTKQSHLN--------- 140

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
               +  +  L+++G  S  + Y     +++
Sbjct: 141 --WLEWAATRLSENGRISFVLPYEAGKTLIK 169


>gi|331270010|ref|YP_004396502.1| 50S ribosomal protein L11 methyltransferase [Clostridium botulinum
           BKT015925]
 gi|329126560|gb|AEB76505.1| ribosomal protein L11 methyltransferase [Clostridium botulinum
           BKT015925]
          Length = 312

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 50/216 (23%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEK--------------R 96
           W+ +Y      +    +P  E  +      +++     +                    +
Sbjct: 117 WKKYYKPTKIGNEIVVKPTWEEYIKKDDEIVIELDPGMAFGTGTHETTRLCVKALEEYVK 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +     VGVD+   A++ AK N   N +    + L  +
Sbjct: 177 EDSVVFDIGTGSGILSIAAAKLNAK-HVVGVDLDPVAVDAAKENVQLNNL-NNIEILYGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V G   +IV+N   I + I+  L  +V+ F         +DG              
Sbjct: 235 LMEVVNGKATIIVAN---ILADIIKILAEDVKKF--------VVDGGYFI---------- 273

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
               G+       ++K DV+   E     +     D
Sbjct: 274 --SSGIIL-----DRKDDVIEKLEECGFKIEKINTD 302


>gi|15903434|ref|NP_358984.1| hypothetical protein spr1391 [Streptococcus pneumoniae R6]
 gi|116516448|ref|YP_816825.1| hypothetical protein SPD_1365 [Streptococcus pneumoniae D39]
 gi|148984884|ref|ZP_01818137.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP3-BS71]
 gi|148992574|ref|ZP_01822242.1| hypothetical protein CGSSp9BS68_04200 [Streptococcus pneumoniae
           SP9-BS68]
 gi|149021810|ref|ZP_01835817.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP23-BS72]
 gi|168484975|ref|ZP_02709920.1| methyltransferase [Streptococcus pneumoniae CDC1873-00]
 gi|168488802|ref|ZP_02713001.1| methyltransferase [Streptococcus pneumoniae SP195]
 gi|168491572|ref|ZP_02715715.1| methyltransferase [Streptococcus pneumoniae CDC0288-04]
 gi|194398665|ref|YP_002038168.1| hypothetical protein SPG_1462 [Streptococcus pneumoniae G54]
 gi|237650218|ref|ZP_04524470.1| hypothetical protein SpneC1_05762 [Streptococcus pneumoniae CCRI
           1974]
 gi|237820899|ref|ZP_04596744.1| hypothetical protein SpneC19_00967 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|15459041|gb|AAL00195.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077024|gb|ABJ54744.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
 gi|147922906|gb|EDK74022.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP3-BS71]
 gi|147928591|gb|EDK79605.1| hypothetical protein CGSSp9BS68_04200 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147930046|gb|EDK81033.1| putative manganese-dependent inorganic pyrophosphatase
           [Streptococcus pneumoniae SP23-BS72]
 gi|172041892|gb|EDT49938.1| methyltransferase [Streptococcus pneumoniae CDC1873-00]
 gi|183572627|gb|EDT93155.1| methyltransferase [Streptococcus pneumoniae SP195]
 gi|183574191|gb|EDT94719.1| methyltransferase [Streptococcus pneumoniae CDC0288-04]
 gi|194358332|gb|ACF56780.1| conserved hypothetical protein [Streptococcus pneumoniae G54]
 gi|301794545|emb|CBW36989.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|301800369|emb|CBW33000.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|332072329|gb|EGI82812.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA17570]
          Length = 249

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 DPYSNLNESEHYLLARHEITTNL----------EEICHSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLKRHNL 191


>gi|326802942|ref|YP_004320760.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650229|gb|AEA00412.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 200

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 59/177 (33%), Gaps = 36/177 (20%)

Query: 61  YNVRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
                   S  F        T +++++ L       E +   +ILDLG G G V + L  
Sbjct: 26  RTYEFITDSGVFSRGRLDYGTRVMLEALLK------EGKTYHKILDLGCGYGPVGVVLGD 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
             P      VD++ +AL +AK N   N V +  +   S  +  +    +D+I++NPP   
Sbjct: 80  HYPEVHLDLVDVNERALALAKKNLALNQV-DSANFYLSSAYEGLSDHDYDLIITNPPIRA 138

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                    G        +G   +L   G   V I   Q  
Sbjct: 139 -------------------------GKKVVHAFIEGAYDYLEAGGDLVVVIQKKQGA 170


>gi|310659448|ref|YP_003937169.1| methyltransferase [Clostridium sticklandii DSM 519]
 gi|308826226|emb|CBH22264.1| putative methyltransferase [Clostridium sticklandii]
          Length = 252

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 18/152 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   ++K  V    D GTGTG + + +  +S       ++I  +  ++A  + 
Sbjct: 32  IDAVLLSNFVTVKKGYVG--ADFGTGTGIIPILVAGKSKVDHIYAIEIQKEVAQMANRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRIS 195
           + N + +R + L  +   ++        D I SNPPY+ +  +  +    ++   +   +
Sbjct: 90  MLNKLEDRVEILNINLKDALSYIKPHSLDFITSNPPYMHANGLTNENEKKKISRHEIHCN 149

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           LD           I    S+ L  +G   +  
Sbjct: 150 LD----------DIMKTASKLLKDNGSFFMVH 171


>gi|290958521|ref|YP_003489703.1| ribonucleotide methyltransferase [Streptomyces scabiei 87.22]
 gi|260648047|emb|CBG71155.1| putative ribonucleotide methyltransferase [Streptomyces scabiei
           87.22]
          Length = 510

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G    AL       +    D++ +AL I       +GV    D  Q
Sbjct: 165 RTPVGSALDLGTGSGIQ--ALHATRHATRVTATDLNPRALHITALTLALSGVPA-ADLRQ 221

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F  V  +  +D++VSNPP++ S                   DGG+ G    RT+   
Sbjct: 222 GSLFEPVRADERYDLVVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVAQ 270

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               LN+ G       +    
Sbjct: 271 SGERLNEGGFAQFLANWQHVE 291


>gi|125625182|ref|YP_001033665.1| hypothetical protein llmg_2424 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493990|emb|CAL98988.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 250

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 28/193 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  S + F         +D+ L    PR+ KR   +I+D+  G GAV L        
Sbjct: 19  GVKIIQSREVFSFS------IDAILLARFPRLPKRG--KIVDMCAGNGAVGL-FASSKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES 177
            + + ++I  +  ++A+ +   N +++R   +  +   ++  L     D+I  NPPY + 
Sbjct: 70  AQIIELEIQERLADMAQRSIELNELTDRMSVINDNLNQALNHLHTSSTDLIFCNPPYFKV 129

Query: 178 VIVDCLGLE-----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              D    E     +   +   +LD           I +   + L  +G   +     + 
Sbjct: 130 DSADSHLNESQHYTLARHELTTNLD----------EIFEISKKLLKTNGHIVMVHRPERF 179

Query: 233 VDVVRIFESRKLF 245
           +++V    +  L 
Sbjct: 180 LEIVDKMRANNLQ 192


>gi|255514009|gb|EET90273.1| methyltransferase small [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 252

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 12/130 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V  I +  +G G +  +LL      +   VDI+ +A+E+ +     NG+  + D   SD 
Sbjct: 45  VGTICEFCSGPGLIGFSLLANELCDRLCLVDINPEAIELCRYTIEQNGLEGKVDAFVSDG 104

Query: 158 FSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
             +V    ++D+++SNPP+ +              + +  L     G   +R     V  
Sbjct: 105 LKNVPANQVWDLVISNPPHFDGSEK----------EYKNDLIAIDPGWRVHREFYADVGA 154

Query: 216 HLNKDGLCSV 225
           HLNK G    
Sbjct: 155 HLNKGGRILF 164


>gi|153938423|ref|YP_001389425.1| hypothetical protein CLI_0117 [Clostridium botulinum F str.
           Langeland]
 gi|152934319|gb|ABS39817.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295317535|gb|ADF97912.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 246

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 19/168 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPRI 194
             N + E+   ++ D      ++G    DV+  NPPY    + I++      +   +   
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPYKTQGTGIININDKNAISRHEICC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +LD           +       L   G   +    ++ VD++ +    
Sbjct: 150 TLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|300071991|gb|ADJ61391.1| hypothetical protein LLNZ_12530 [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 243

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 75/193 (38%), Gaps = 28/193 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  S + F         +D+ L    PR+ KR   +I+D+  G GAV L        
Sbjct: 12  GVKIIQSREVFSFS------IDAILLARFPRLPKRG--KIVDMCAGNGAVGL-FASSKTN 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES 177
            + + ++I  +  ++A+ +   N +++R   +  +   ++  L     D+I  NPPY + 
Sbjct: 63  AQIIELEIQERLADMAQRSIELNELTDRMSVINDNLNQALNHLHTSSTDLIFCNPPYFKV 122

Query: 178 VIVDCLGLE-----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              D    E     +   +   +LD           I +   + L  +G   +     + 
Sbjct: 123 DSADSHLNESQHYTLARHELTTNLD----------EIFEISKKLLKTNGHIVMVHRPERF 172

Query: 233 VDVVRIFESRKLF 245
           +++V    +  L 
Sbjct: 173 LEIVDKMRANNLQ 185


>gi|289168351|ref|YP_003446620.1| hypothetical protein smi_1518 [Streptococcus mitis B6]
 gi|288907918|emb|CBJ22758.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 249

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   N + E+ + +  D     S ++G   D+I+ NPPY + 
Sbjct: 71  AQILAVEIQERLADMAERSVRLNDLEEQMEVICDDLKNMPSRIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------QEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLQRHNL 191


>gi|314937306|ref|ZP_07844648.1| methyltransferase [Staphylococcus hominis subsp. hominis C80]
 gi|313654602|gb|EFS18352.1| methyltransferase [Staphylococcus hominis subsp. hominis C80]
          Length = 241

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 31/195 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  + + F    +  LL            + R    ILDL  G G + L L  +S  
Sbjct: 15  NLKIIQNDEVFSFSTDALLLAHF--------TKVRKNDSILDLCAGNGVIALLLAAKSHQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K   ++I  +  ++A+ +   N + ER      D     +      F +I  NPPY + 
Sbjct: 67  -KIESIEIQEQLADMAQRSFKYNQLEERLSMHNMDLKDVYQTFKPSQFTLITCNPPYFKQ 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
             +     E       +   SL    D            +RH L + G   +     +  
Sbjct: 126 NQLHQHQKEAHKIARHEIMCSL---ED--------CMFAARHLLKQGGRLVMVH---RAE 171

Query: 234 DVVRIFESRKLFLVN 248
            ++ +    +   + 
Sbjct: 172 RLMDVLTEMRQANIE 186


>gi|228476236|ref|ZP_04060939.1| methyltransferase [Staphylococcus hominis SK119]
 gi|228269721|gb|EEK11220.1| methyltransferase [Staphylococcus hominis SK119]
          Length = 241

 Score = 75.1 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 31/195 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  + + F    +  LL            + R    ILDL  G G + L L  +S  
Sbjct: 15  NLKIIQNDEVFSFSTDALLLAHF--------TKVRKNDSILDLCAGNGVIALLLAAKSHQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K   ++I  +  ++A+ +   N + ER      D     +      F +I  NPPY + 
Sbjct: 67  -KIESIEIQEQLADMAQRSFKYNQLEERLSMHNMDLKDVYQTFKPSQFTLITCNPPYFKQ 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
             +     E       +   SL    D            +RH L + G   +     +  
Sbjct: 126 NQLHQHQKEAHKIARHEIMCSL---ED--------CMFAARHLLKQGGRLVMVH---RAE 171

Query: 234 DVVRIFESRKLFLVN 248
            ++ +    +   + 
Sbjct: 172 RLMDVLTEMRQANIE 186


>gi|116513093|ref|YP_812000.1| hypothetical protein LACR_2444 [Lactococcus lactis subsp. cremoris
           SK11]
 gi|116108747|gb|ABJ73887.1| Predicted O-methyltransferase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 243

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 76/193 (39%), Gaps = 28/193 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  S + F         +D+ L    PR+ KR   +I+D+  G GAV L        
Sbjct: 12  GVKIIQSREVFSFS------IDAILLARFPRLPKRG--KIVDMCAGNGAVGL-FASSKTN 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES 177
            + + ++I  +  ++A+ +   N +++R   +  +   ++  L     D+I  NPPY + 
Sbjct: 63  AQIIELEIQERLADMAQRSIELNELTDRMSVINDNLNQALNHLHTSSTDLIFCNPPYFKV 122

Query: 178 VIVDCLGLE-----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              D    E     +   +   +LD           I +   + L  +G  ++     + 
Sbjct: 123 DSTDSHLNESQHYTLARHELTTNLD----------EIFEISKKLLKTNGHIAMVHRPERF 172

Query: 233 VDVVRIFESRKLF 245
           +++V    +  L 
Sbjct: 173 LEIVDKMRANNLQ 185


>gi|167768115|ref|ZP_02440168.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1]
 gi|167709639|gb|EDS20218.1| hypothetical protein CLOSS21_02670 [Clostridium sp. SS2/1]
 gi|291559966|emb|CBL38766.1| Predicted O-methyltransferase [butyrate-producing bacterium SSC/2]
          Length = 244

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++      F    +  LL D A        + ++  R+LDLGTGTG + + +  ++  
Sbjct: 13  GYQIIQKEQGFCFGMDAVLLSDFA--------QVKNGGRVLDLGTGTGILPILMEAKTKA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175
               G++I  +  E+A  +   N + ++ + ++ D   +        FD I SNPPY+
Sbjct: 65  VHLTGLEIQPEMAEMAARSVKLNHLEDKIEIVEGDIKEASAIFSHDSFDTITSNPPYM 122


>gi|317491009|ref|ZP_07949445.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920556|gb|EFV41879.1| hypothetical protein HMPREF0864_00208 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 249

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 16/180 (8%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKA 133
           R E ++  DS L  S   I   D  +ILD+GTG+G + L L + +    +   V++   A
Sbjct: 27  RCEMKVGTDSILLGSWTDISNLDG-KILDIGTGSGLLALMLAQRTTDVVQIDAVELDQNA 85

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRD 189
              A  N V +  + R            +     +D+IVSNPPY         +      
Sbjct: 86  ATQAAENFVLSPWANRMRVHTCSLQAFAAQTSERYDLIVSNPPYYPQGVECRNVSRNTAR 145

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +   +S          ++++          +G  +V +  +  V  ++       F+++ 
Sbjct: 146 YTSELS----------HQSLLKHARELATDNGRMAVVLPTDVGVSFIQTAAQEGWFILHY 195


>gi|157273446|gb|ABV27345.1| putative methyltransferase [Candidatus Chloracidobacterium
           thermophilum]
          Length = 183

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 35/166 (21%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP ++ + ++      PRI  +     LDL  G+GAV +         +   V+ S +AL
Sbjct: 22  RPTSDRMRETLFNILAPRISDKA---FLDLCAGSGAVGIE-ALSRGAARATFVERSRRAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVR 188
                N    G+ E  + +Q D  S+++        FD I  +PPY  S           
Sbjct: 78  MALVENLARCGIGEEAEVIQRDAISAIKQFVQAGRRFDFIFCDPPYASS----------- 126

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            ++P ++L G                  L +DG   VE    Q + 
Sbjct: 127 LYEPLLALVGN--------------CPLLAEDGWFIVEHHAKQAIA 158


>gi|312863126|ref|ZP_07723364.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
 gi|311100662|gb|EFQ58867.1| methyltransferase small domain protein [Streptococcus vestibularis
           F0396]
          Length = 254

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                V++  +  ++A+ +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APITLVELQERLADMAQRSVTLNQLEDQVTVVNDDLKNLLDHTPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|116628253|ref|YP_820872.1| hypothetical protein STER_1524 [Streptococcus thermophilus LMD-9]
 gi|116101530|gb|ABJ66676.1| Predicted O-methyltransferase [Streptococcus thermophilus LMD-9]
          Length = 254

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                V++  +  ++AK +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APITLVELQERLADMAKRSVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|116491397|ref|YP_810941.1| 16S RNA G1207 methylase RsmC [Oenococcus oeni PSU-1]
 gi|116092122|gb|ABJ57276.1| 16S rRNA m(2)G 1207 methyltransferase [Oenococcus oeni PSU-1]
          Length = 204

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 38/198 (19%)

Query: 60  FYNVR--LTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           F          +  F + R +  T++L+++         ++    +ILDLGTG G V ++
Sbjct: 26  FAGRELIFKTDAGVFSKLRVDFGTKVLLETIH----SHFQELPDGKILDLGTGYGPVGIS 81

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L    P  K   VD++ ++L +AK+N   N  S      QS+ + +V G +  I+ NPP 
Sbjct: 82  LKALKPDLKIDMVDVNQRSLNLAKNNLELNDFSANV--FQSNIYENVTGSYAAIIVNPPI 139

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-V 233
                                      G +    +     +HL   G+    +   Q   
Sbjct: 140 RA-------------------------GKTVVTKMLVESKKHLINGGIILAVLQKKQGAP 174

Query: 234 DVVRIFESRKLFLVNAFK 251
              R  +S     V   K
Sbjct: 175 SAERNLKST-FENVEILK 191


>gi|322804332|emb|CBZ01882.1| predicted O-methyltransferase [Clostridium botulinum H04402 065]
          Length = 246

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 69/169 (40%), Gaps = 21/169 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIISFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPR 193
             N + E+   ++ D         +E   DV+  NPPY    + I++      +   +  
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKDIE-KVDVVTVNPPYKTQGTGIININDKNAISRHEIC 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            +LD           +       L   G   +    ++ VD++ +    
Sbjct: 149 CTLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|238927560|ref|ZP_04659320.1| methyltransferase [Selenomonas flueggei ATCC 43531]
 gi|238884485|gb|EEQ48123.1| methyltransferase [Selenomonas flueggei ATCC 43531]
          Length = 245

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 21/171 (12%)

Query: 64  RLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            L +       R +     +D+ L    P +  R+   +LDLGTGTG + L +   +   
Sbjct: 13  DLCMGGRHIIQRMDMFCFSMDAVLLAHFPTLTGREC--VLDLGTGTGIIPLLIADRT--A 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE-- 176
               V++     E+A  NA  NG++E+    + D+         G +D++ +NPPY    
Sbjct: 69  AVTAVELDPVQAELAVRNAALNGLTEKITVREGDYRDPSALFSCGAYDLVFANPPYRPVG 128

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +   G      +   +L            +    +  L   G  ++  
Sbjct: 129 RGALSMGGRAAARHEITATLA----------DVVRAAAYALRHGGRLAMVH 169


>gi|304405871|ref|ZP_07387529.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
 gi|304345114|gb|EFM10950.1| methyltransferase small [Paenibacillus curdlanolyticus YK9]
          Length = 277

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 26/195 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  S + F    +  LL   A              +++DL TG G + L LL      
Sbjct: 37  LQIIQSREVFSFSMDAVLLARFA--------SIPPRGKVIDLCTGNGVIPL-LLSTRTRA 87

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESV 178
              GV+I  +  ++AK +   N + E+   ++ D      ++ +G++D +  NPPY+++ 
Sbjct: 88  AIDGVEIQPRLADMAKRSVTLNNLDEQIQIIEGDLRTFPRTAGQGIYDAVTVNPPYMQTQ 147

Query: 179 IVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
             D    E   +   +   +LD           + +  +R +   G  S+    N+ +D+
Sbjct: 148 TGDQNENEHYAIARHEIHCTLD----------EVVEASARLVRTGGKVSMVHRPNRLMDI 197

Query: 236 VRIFESRKLFLVNAF 250
           +  F   KL      
Sbjct: 198 LESFRRWKLEPKRIR 212


>gi|213650661|ref|ZP_03380714.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Salmonella enterica subsp. enterica serovar Typhi str.
           J185]
          Length = 58

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%)

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           + D   + L   G   +E G+ Q   V   F       V   +DYGGN+RV
Sbjct: 1   MIDNARQMLTPGGFLLLEHGWRQGEAVRAAFRRSGYTDVETCRDYGGNERV 51


>gi|238896026|ref|YP_002920762.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|238548344|dbj|BAH64695.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 252

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V  +LD+G G+G + L L + +        V++  +A   A+ NA+ +  + R 
Sbjct: 46  WAPIAGVKHVLDIGAGSGLLALMLAQRTGDDVHVEAVELDEEAAAQARENALASPWASRI 105

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  Q+D   W  S    +++I+SNPP+    +       E   +    +LD        +
Sbjct: 106 EVWQADIHQWQPSQTRRYELIISNPPFFAEGVPCATSQREQARY--TTTLD--------H 155

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            ++    + H+ ++G   V +  +     +    +    L
Sbjct: 156 ASLLTCAAEHITEEGFFCVVLPVDIGNAFIERARAMGWHL 195


>gi|28209992|ref|NP_780936.1| methyltransferase [Clostridium tetani E88]
 gi|28202427|gb|AAO34873.1| methyltransferase [Clostridium tetani E88]
          Length = 258

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   I++ D   ILDL +GTG V   +  +  F K +G++I    +++AK  A
Sbjct: 41  VDAVLLANFANIKRNDN--ILDLCSGTGIVPFIISGKRKFNKILGIEIQEDMVDMAKRTA 98

Query: 142 VTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPY--IESVIVDCLGLE-VRDFDPRI 194
           + N + E+   +  D          G FDV+  NPPY   +S I++    + +   +   
Sbjct: 99  MYNELEEKVKFILGDLKDTKLLKNLGEFDVVTVNPPYKLKDSGIINKNSKDSIARHEI-- 156

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                   L     +    +  L   G   +     +   +V I  + + + + 
Sbjct: 157 --------LCDIDDVIKSANILLKDRGRFYMIH---RPERIVDILTTMRKYKIE 199


>gi|87120957|ref|ZP_01076849.1| putative ribosomal RNA small subunit methyltransferase C
           [Marinomonas sp. MED121]
 gi|86163795|gb|EAQ65068.1| putative ribosomal RNA small subunit methyltransferase C
           [Marinomonas sp. MED121]
          Length = 352

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 22/127 (17%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD G G G + + L   +   +   +D S  A+   K +   NGVSE+   L S+  
Sbjct: 209 ARMLDFGCGDGIISIWLAMHT-NARITALDDSALAIAATKMSCEANGVSEKMTFLGSNGL 267

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           + V+G F+ I SNPP+ +    D                      S          +HL 
Sbjct: 268 TEVKGRFNYIFSNPPFHKGTDTD---------------------YSIAENFILNAKQHLT 306

Query: 219 KDGLCSV 225
            +G   +
Sbjct: 307 LNGELFI 313


>gi|315925469|ref|ZP_07921680.1| SAM-dependent methyltransferase [Pseudoramibacter alactolyticus
           ATCC 23263]
 gi|315621370|gb|EFV01340.1| SAM-dependent methyltransferase [Pseudoramibacter alactolyticus
           ATCC 23263]
          Length = 261

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 62/196 (31%), Gaps = 23/196 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  S   F+        +D+ L             +++DLGTGTG + L L   +  
Sbjct: 20  GLQILQSPHYFKFN------IDAVLLAWFAASAVHPSSKVVDLGTGTGILPLLLHGRTGV 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                +++     ++A  +   N +++       D            +D ++SNPP++  
Sbjct: 74  RHIDALELQPVVADMAARSVAINHLTDVIHIHCGDLRQPGTAFHASAYDAVISNPPFLPV 133

Query: 178 VIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   +       +   +L            IA      L   G   +    ++  D
Sbjct: 134 GHGGVNPDDALAIARHEITCTL----------EDIARFARTMLKDRGKLFLVHRADRLTD 183

Query: 235 VVRIFESRKLFLVNAF 250
           +     +  L L    
Sbjct: 184 IAVTLRAHGLELKRLR 199


>gi|306829840|ref|ZP_07463027.1| methyltransferase [Streptococcus mitis ATCC 6249]
 gi|304427851|gb|EFM30944.1| methyltransferase [Streptococcus mitis ATCC 6249]
          Length = 249

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K  +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKNGL--IVDFCAGNGAVGL-FASSRTK 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A+ +   NG+ E+   +  D     + V+G   D+I+ NPPY + 
Sbjct: 71  AKILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPARVQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------EEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++ + +   L
Sbjct: 181 DILDMLQRHNL 191


>gi|299820729|ref|ZP_07052618.1| O-methyltransferase [Listeria grayi DSM 20601]
 gi|299817750|gb|EFI84985.1| O-methyltransferase [Listeria grayi DSM 20601]
          Length = 254

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 79/192 (41%), Gaps = 18/192 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+  S   F         +D+ L  +  RI K+   +I+DL +G G + L LL     
Sbjct: 23  DLRIIQSPSVFSFS------LDAVLLANFSRIPKKKG-KIIDLCSGNGIIPL-LLSTRTN 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
              +GV++  +  ++AK +   N ++E+ +  + D  +      +   DV+  NPPY  +
Sbjct: 75  ASIIGVELQQRLADMAKRSIRYNKLTEQIEIYEHDLRTITSVLPKERADVVTCNPPYFAT 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                    +++ +P +++      +     +    S  + + G   +     + +D++ 
Sbjct: 135 P-----PTSLKNGNPHLAIARHEI-MCTLDDVIKTSSELVKQGGKVFLVHRPERLIDMID 188

Query: 238 IFESRKLFLVNA 249
           I    +L     
Sbjct: 189 IMRKYRLEPKRV 200


>gi|296127034|ref|YP_003634286.1| methyltransferase small [Brachyspira murdochii DSM 12563]
 gi|296018850|gb|ADG72087.1| methyltransferase small [Brachyspira murdochii DSM 12563]
          Length = 199

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++   +   F P+      +D      L  I+     R+LDLG G G V +   K     
Sbjct: 11  LKFITNEKLFSPKK-----IDIGTLSMLEEIDFSLESRVLDLGCGYGIVGILAAKIIGED 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           K V  DI   A+  +K NA+ NG+      ++SD   ++    F +I+SNPPY   
Sbjct: 66  KVVMCDIDDNAVNTSKENALLNGLK-NISIIKSDGLKNINYKDFSLILSNPPYHSD 120


>gi|219670303|ref|YP_002460738.1| ribosomal protein L11 methyltransferase [Desulfitobacterium
           hafniense DCB-2]
 gi|254783300|sp|B8FUN2|PRMA_DESHD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|219540563|gb|ACL22302.1| ribosomal protein L11 methyltransferase [Desulfitobacterium
           hafniense DCB-2]
          Length = 312

 Score = 75.1 bits (184), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 30/159 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +RI DLGTG+G + +A  K     +   +D+   A+++A+ N   N V++R    Q 
Sbjct: 171 KPDMRIFDLGTGSGILAIAAAKL--GAQVEAIDLDSVAVKVAQENVELNQVADRISVRQG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + ++G  D++V+N   I  VI+  +                       + I      
Sbjct: 229 DLGTVLQGQADLVVAN--IIADVILMLIP--------------------DLKRIMKEDGE 266

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            L         IG+    DV        L ++   +D G
Sbjct: 267 FLASG-----IIGHR-SSDVEAGLGEHGLEVLEKKEDSG 299


>gi|239917256|ref|YP_002956814.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
 gi|281414266|ref|ZP_06246008.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
 gi|239838463|gb|ACS30260.1| 16S rRNA m(2)G 1207 methyltransferase [Micrococcus luteus NCTC
           2665]
          Length = 211

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 9/149 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
              + + +      P+    +D   A     +       R LD+G G G + L L   SP
Sbjct: 30  GRDVEVQTANGIFSPDG---LDKGTAALFSAVPAPPATGRFLDVGAGWGPIALTLALRSP 86

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   V+++ ++L++ + NA   G+         D     E  FD+I SNPP    +  
Sbjct: 87  EAEVTAVEVNDRSLQLTRDNAAALGLGNVVALRPEDVPEGAE--FDLIWSNPPI--RIGK 142

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             L   +  + PR++  GG   L   + +
Sbjct: 143 PALHALLERWLPRLAP-GGEAWLVVQKNL 170


>gi|296110374|ref|YP_003620755.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154]
 gi|295831905|gb|ADG39786.1| methyltransferase (putative) [Leuconostoc kimchii IMSNU 11154]
          Length = 253

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 23/186 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSN 140
           D+ L      ++ +     +DLG GTGAV L     SP    K   V+I  +  E+A+ +
Sbjct: 34  DAILLAHFAGVKGKGAGLTVDLGAGTGAVGLF---YSPKVIGKIKLVEIQPELAEMAQRS 90

Query: 141 AVTNGVSERFDTLQS---DWFSSV-EGLFDVIVSNPPYIESVIV----DCLGLEVRDFDP 192
              NG+ +R   L S   D F+ +  G  + ++SNPPY     +         E+   + 
Sbjct: 91  IEMNGLQKRVSVLLSDMKDIFNDIQPGSVETVLSNPPYFPLNEMTKTNHDTHYELARHEL 150

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            I L G          +A   ++ L  +G   +    ++  DV   FE RKL +      
Sbjct: 151 TIDLPG----------LAQVANKLLKNNGKFYMVHRPDRLTDVFSAFEQRKLRIKRMQFV 200

Query: 253 YGGNDR 258
           YG +DR
Sbjct: 201 YGKSDR 206


>gi|322377023|ref|ZP_08051516.1| methyltransferase [Streptococcus sp. M334]
 gi|321282830|gb|EFX59837.1| methyltransferase [Streptococcus sp. M334]
          Length = 249

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 76/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGM--IVDFCAGNGAVGL-FASTRTH 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+ + +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILAVEIQERLADMAERSVRLNGLEEQMEVICDDLKNMPAYIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------QEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLQRHNL 191


>gi|329925542|ref|ZP_08280416.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
 gi|328939825|gb|EGG36165.1| methyltransferase small domain protein [Paenibacillus sp. HGF5]
          Length = 255

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 26/174 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +  S + F    +  LL   A              RILD+ TG G + + LL    
Sbjct: 20  HELGIIQSEEVFSFSMDAVLLARFA--------SIPRRGRILDMCTGNGVIPI-LLSTRT 70

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
                G++I  +  ++A+ +   N + ++    + D     +      +D+I  NPPY+ 
Sbjct: 71  GTPIEGIEIQPRLADMARRSVAMNDLQDQITIHEGDLRELYKEKGYGAYDLITVNPPYMP 130

Query: 177 SVIVDC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               D        +   +   +L            + +  +R L + G  S+  
Sbjct: 131 MNGSDLKLNEHQAIARHEIHCTL----------EEVIESCARLLKQGGKMSMVH 174


>gi|89895874|ref|YP_519361.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51]
 gi|122481887|sp|Q24SS5|PRMA_DESHY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|89335322|dbj|BAE84917.1| ribosomal protein L11 methylase [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 30/159 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +RI DLGTG+G + +A  K     +   +D+   A+++A+ N   N V++R    Q 
Sbjct: 171 KPDMRIFDLGTGSGILAIAAAKL--GAQVEAIDLDSVAVKVAQENVELNQVADRISVRQG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + ++G  D++V+N   I  VI+  +                       + I      
Sbjct: 229 DLGTVLQGQADLVVAN--IIADVILMLIP--------------------DLKRIMKEDGE 266

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            L         IG+    DV        L ++   +D G
Sbjct: 267 FLASG-----IIGHR-SSDVEAGLGEHGLEVLEKKEDSG 299


>gi|322381211|ref|ZP_08055214.1| methyltransferase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154787|gb|EFX47058.1| methyltransferase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 259

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 26/197 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +  S + F    +  LL   A   ++P     +  +I+DL TG G + L LL    
Sbjct: 26  HGLHIIQSEEVFSFSLDAVLL---ARFCTVP-----NKGKIMDLCTGNGVIPL-LLSTRT 76

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                G++I  K  ++A  N   N + E+   +  D     +    G FD++  NPPY+ 
Sbjct: 77  KAHIWGIEIQQKLADMAMRNVDLNMLQEQLHMIHGDLRHIYQVLGTGQFDLVTVNPPYLP 136

Query: 177 SVIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
               +    E       +   +L            +    S+ L   G  ++    ++ V
Sbjct: 137 VPTGEKNKNEHVAAARHEIFCTL----------EDVIVVASKLLRTGGKMAMVHRSSRLV 186

Query: 234 DVVRIFESRKLFLVNAF 250
           D+  +    ++      
Sbjct: 187 DICFLMRQYRIEPKRIR 203


>gi|294781520|ref|ZP_06746858.1| methyltransferase small domain protein [Enterococcus faecalis
           PC1.1]
 gi|294451377|gb|EFG19841.1| methyltransferase small domain protein [Enterococcus faecalis
           PC1.1]
          Length = 202

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 73/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+     ET       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRETVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|170756863|ref|YP_001779688.1| hypothetical protein CLD_0725 [Clostridium botulinum B1 str. Okra]
 gi|169122075|gb|ACA45911.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 246

 Score = 75.1 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 70/168 (41%), Gaps = 19/168 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++AK + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMAKRSI 89

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPRI 194
             N + E+   ++ D      ++G    DV+  NPPY    + I++      +   +   
Sbjct: 90  KYNNLQEKVRFIEGDLKNLKLLKGIEKVDVVTVNPPYKTQGTGIININDKNAISRHEICC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +LD           +       L   G   +    ++ VD++ +    
Sbjct: 150 TLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|289523383|ref|ZP_06440237.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503075|gb|EFD24239.1| putative N-6 adenine-specific DNA methylase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 247

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 16/159 (10%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISC 131
           +P     + VD+ L     R+  +D  R+++LGT +GAV L L K       + G+DI  
Sbjct: 21  QPLHGPRVSVDTVLLSWFVRLRSKD--RVMELGTASGAVALILAKRWQKVSAIKGIDIQE 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           + +EIA+ NA+ N + ++    + D            FD +V NPPY E+        E 
Sbjct: 79  ELIEIARENALANDLEDKVTFERGDVREISAICPPQTFDAVVVNPPYDEAFKSRTSPKEG 138

Query: 188 RDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSV 225
                 ++L     G++     +       L   G   +
Sbjct: 139 ------VALA--KQGIACTLEDVIRASFYLLKDRGRLYM 169


>gi|239981073|ref|ZP_04703597.1| transferase [Streptomyces albus J1074]
 gi|291452940|ref|ZP_06592330.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074]
 gi|291355889|gb|EFE82791.1| rRNA or tRNA methyltransferase [Streptomyces albus J1074]
          Length = 481

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 15/131 (11%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLGTG+G    AL       +    D++ +AL         +G  E  + L+   F  V
Sbjct: 139 LDLGTGSGIQ--ALHASVDATRVTATDLNPRALSFTALTLALSGAPE-AELLEGSLFEPV 195

Query: 162 EG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +G  +D+IVSNPP++ S                   DGG+ G    RT+       LN+ 
Sbjct: 196 DGNRYDLIVSNPPFVISPGARLTYR-----------DGGMSGDDLCRTLVQQAGDRLNEG 244

Query: 221 GLCSVEIGYNQ 231
           G       +  
Sbjct: 245 GYAHFLANWQH 255


>gi|225575714|ref|ZP_03784324.1| hypothetical protein RUMHYD_03807 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037072|gb|EEG47318.1| hypothetical protein RUMHYD_03807 [Blautia hydrogenotrophica DSM
           10507]
          Length = 245

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 59/153 (38%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+  R   ++LD+  GTG + + L  ++      G++I     ++A+ + 
Sbjct: 31  MDAVLLSGFARV--RPEEKVLDMCCGTGIIPILLRAKTEGRDFTGLEIQEMCADMARRSV 88

Query: 142 VTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + +    +  D    S++ G   FDV+  NPPY+     ++   +   +   +   
Sbjct: 89  SYNHLEKEIRIVTGDVKEASAIFGRASFDVVTCNPPYMIGQHGLVNPHMPKAIARHEVLC 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L            +    +  L   G   +  
Sbjct: 149 TL----------EDVVSQAANVLKSKGRFYLVH 171


>gi|50122208|ref|YP_051375.1| hypothetical protein ECA3286 [Pectobacterium atrosepticum SCRI1043]
 gi|81827048|sp|Q6D211|TRMN6_ERWCT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|49612734|emb|CAG76184.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 248

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                   R+LD+G+G+G + L L + S P  +   V++   A + AK N+  +  ++R 
Sbjct: 42  WAPVSSATRVLDIGSGSGLLALMLAQRSEPHVRIDAVELDSAASQQAKENSAASPWADRI 101

Query: 151 DTLQSDWFSSVEGL---FDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHY 206
                D  S        + +I+SNPPY    I       E   +            L  +
Sbjct: 102 TVYAEDIVSFSAMRTADYSLIISNPPYFPPGIACGSAQREQARY----------TTLLTH 151

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND----RVLLF 262
             +     + L  +GL  V +        + + +     +    +     D    RVLL 
Sbjct: 152 EVLLRCAHQLLMPEGLFCVVLPVQVAEHFIPLAQQHNWHVQQQLRVSEQEDKPAHRVLLA 211


>gi|302383414|ref|YP_003819237.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264]
 gi|302194042|gb|ADL01614.1| methyltransferase small [Brevundimonas subvibrioides ATCC 15264]
          Length = 254

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+L+ G G GAV   +    P     GV+    A+ +   N   N + +R   +Q+
Sbjct: 48  KPGERVLEAGCGVGAVLTQIAARRPGVVVTGVERDPAAVALGACNVGLNALQDRMAVVQA 107

Query: 156 DW---FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D    F+++    FD  VSNPP+ +           +    R +     DGL+ +     
Sbjct: 108 DVAGGFAALGRERFDWAVSNPPFFDDEAALRAPSPAK----RGAWIA-DDGLAVWIRFLS 162

Query: 212 GVSRHLNKDGLCSVEI 227
             +R     G   V  
Sbjct: 163 DGAR---DGGRIVVIH 175


>gi|315501399|ref|YP_004080286.1| methyltransferase small [Micromonospora sp. L5]
 gi|315408018|gb|ADU06135.1| methyltransferase small [Micromonospora sp. L5]
          Length = 223

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G G +   L   +P      VD++ +A  +  +NA   G ++R   +  D     
Sbjct: 88  LDIGCGFGPITCVLATVAPKATVWAVDVNERARALTTANAARVGAADRVRAVAPDELPD- 146

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKD 220
           +  F  I SNPP    +    L   +  + PR++ D G+  L   R +  D + R L + 
Sbjct: 147 DVTFAQIWSNPPI--HIGKPELRGLLLRWLPRLAPD-GVAWLVVARHLGGDSLHRWLVEQ 203

Query: 221 GLCSVEIGYNQK 232
           G  SVE   +QK
Sbjct: 204 GW-SVERHASQK 214


>gi|257899583|ref|ZP_05679236.1| conserved hypothetical protein [Enterococcus faecium Com15]
 gi|257837495|gb|EEV62569.1| conserved hypothetical protein [Enterococcus faecium Com15]
          Length = 244

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSQVFSFS------LDAVLLAHFSRVPKKG--QIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N + E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLDEQMTVHTIDLKDSLSVVRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++     + +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDNSSKLLKTNGRFAMVHRPERFL 175

Query: 234 DVVRIFESR 242
           ++++I ++ 
Sbjct: 176 EIIQIMQNH 184


>gi|288555681|ref|YP_003427616.1| ribosomal protein L11 methyltransferase [Bacillus pseudofirmus OF4]
 gi|288546841|gb|ADC50724.1| ribosomal protein L11 methyltransferase [Bacillus pseudofirmus OF4]
          Length = 310

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 36/175 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T +L   AL   +   E+     ++D+GTG+G + +A  K     + +G+D+   A++ 
Sbjct: 159 PTTVLCIQALESVMQGGEE-----VIDVGTGSGVLSIAAAKLGAK-RVIGLDLDQVAVDS 212

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A  N   N V +     Q +    ++G +D++V+N                      ++ 
Sbjct: 213 AALNVELNQVHDTVTVRQGNLLEQIDGSYDLVVAN---------------------ILA- 250

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                            +  L   G      I   +K +V     S    +    
Sbjct: 251 -------EVIVQFVQDAAAILKPGGAFITSGIIKRKKQEVKDSLVSAGFTIDEVI 298


>gi|50556338|ref|XP_505577.1| YALI0F18414p [Yarrowia lipolytica]
 gi|49651447|emb|CAG78386.1| YALI0F18414p [Yarrowia lipolytica]
          Length = 215

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 5/186 (2%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAV-CLALLKESPFFKGVG 126
            + +EP  ++ +L+D  L      I        + ++GTG+G V    L    P    + 
Sbjct: 14  EEVYEPSEDSFMLLD-VLEMEQSYINSHLSYPVVTEIGTGSGIVTTFMLKSVVPKGVFLA 72

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGL 185
            DIS  A     + +  N  ++  + L+ +  + +     D++V NPPY+          
Sbjct: 73  TDISPFACNQVLATSKENNGTQYLEALRGERTTMMRPHTIDLLVFNPPYVPDDKPVEPYP 132

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKL 244
           E        +L GG DG+     +   +   L+K+G+  +     N+   V         
Sbjct: 133 ETDGDWVDWALLGGEDGMQVTWKVLLELKTILSKNGIAYILFCASNKPEQVAVKMRELGW 192

Query: 245 FLVNAF 250
            +    
Sbjct: 193 IVTRIV 198


>gi|116747562|ref|YP_844249.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB]
 gi|116696626|gb|ABK15814.1| methyltransferase small [Syntrophobacter fumaroxidans MPOB]
          Length = 211

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 17/137 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R++DLGTG   + L +         VGV++  + + +A+ N   NG  +    L++
Sbjct: 10  RPRERVVDLGTGCAVIPLIVAYRGQGRSVVGVELQPELVRLARKNVEVNGFVDSIRILEA 69

Query: 156 DWFS----SVEGLFDVIVSNPPY---IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           D+         G FD+++SNPPY       +       V   +    L G          
Sbjct: 70  DFKEITSSFPPGTFDLVLSNPPYRRLASGRMNAVRQKAVARHE----LAGSA------ED 119

Query: 209 IADGVSRHLNKDGLCSV 225
           +    S  L + G  ++
Sbjct: 120 VFRAASHLLVQGGRLAL 136


>gi|322516256|ref|ZP_08069187.1| methyltransferase [Streptococcus vestibularis ATCC 49124]
 gi|322125256|gb|EFX96626.1| methyltransferase [Streptococcus vestibularis ATCC 49124]
          Length = 254

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                V++  +  ++A+ +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APITLVELQERLADMAQRSVTLNQLEDQVTVVNDDLKNLLDHTPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|126701171|ref|YP_001090068.1| hypothetical protein CD3547 [Clostridium difficile 630]
 gi|255308578|ref|ZP_05352749.1| hypothetical protein CdifA_18451 [Clostridium difficile ATCC 43255]
 gi|115252608|emb|CAJ70451.1| putative methyltransferase [Clostridium difficile]
          Length = 248

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 20/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRI 194
             NG+ ER + +  D         + G + V+ SNPPY  I+ +        +   + R 
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDING-YHVVTSNPPYMHIDGIKNPNDKKAISRHEVRC 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L            +    SR +   G   +     + VD++ +    KL
Sbjct: 147 NL----------EDVIRAASRLVMPRGKFFMIHRPTRLVDIITLGRKYKL 186


>gi|290993534|ref|XP_002679388.1| predicted protein [Naegleria gruberi]
 gi|284093004|gb|EFC46644.1| predicted protein [Naegleria gruberi]
          Length = 239

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 77/205 (37%), Gaps = 30/205 (14%)

Query: 71  TFEPRPETELLVDSALAFSLPRI---EKRDVVRILDLGTGTGAVCLALLKESPFFK---- 123
            +E   +T LLVD+     +       K  +   L++G+G+G V   L K          
Sbjct: 21  VYEFNDDTYLLVDALEKDYIVNHLLNSKCGLKCCLEIGSGSGYVTTFLYKLLNNNHQLMN 80

Query: 124 ------GVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSVEGLF----DVI 168
                  +  DI+  A  + +     N      V    D + +D+ S+ +       D++
Sbjct: 81  ASYSFLLLCSDINPNAALMTRKTLENNKITPQQVPICCDVVLTDFHSAFKQRMKNKIDLL 140

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EI 227
           + NPPY+ S   +    +VR      +  GGIDG          +   L++DG+     I
Sbjct: 141 IFNPPYVPSEQYEMGHNDVRA-----AYAGGIDGREVIDKFIPMIKDILSRDGVFYFVLI 195

Query: 228 GYNQKVDVVRI--FESRKLFLVNAF 250
             N+  +V+++   E    F     
Sbjct: 196 EDNRPQEVMKLLSLEENGGFASKIV 220


>gi|293571579|ref|ZP_06682601.1| methyltransferase [Enterococcus faecium E980]
 gi|291608385|gb|EFF37685.1| methyltransferase [Enterococcus faecium E980]
          Length = 244

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSQVFSFS------LDAVLLAHFSRVPKKG--QIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N + E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLDEQMTVHTIDLKDSLSVVRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++     + +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDNSSKLLKTNGRFAMVHRPERFL 175

Query: 234 DVVRIFESR 242
           ++++I ++ 
Sbjct: 176 EIIQIMQNH 184


>gi|326693027|ref|ZP_08230032.1| RNA methyltransferase [Leuconostoc argentinum KCTC 3773]
          Length = 254

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 29/207 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+  + D F    +  LL   A       ++ +     +DLG GTGAV L      P 
Sbjct: 19  NIRIIQNPDMFAYSLDAILLAYFA------GVKGKGSGLTVDLGAGTGAVGLFYA---PK 69

Query: 122 FK--GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI 175
                  V+I  +  E+A+ + V NG+ +R   +Q+D  +  +    G  + ++SNPPY 
Sbjct: 70  VTGPITLVEIQPELAEMAQRSVVLNGLQDRVSVVQADMKAIFDVIQPGSAETVLSNPPYF 129

Query: 176 ESVIV----DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                    +    E+   +  I L G          +A   ++ L  +G   +    ++
Sbjct: 130 PLNDTTKTNNDQHYEIARHEVTIDLPG----------LAQVANKLLKNNGKFYMVHRPDR 179

Query: 232 KVDVVRIFESRKLFLVNAFKDYGGNDR 258
             D+   F  RKL +      YG  DR
Sbjct: 180 LADIFAAFAQRKLMIKRVQFVYGKADR 206


>gi|325663767|ref|ZP_08152171.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331087287|ref|ZP_08336357.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325470260|gb|EGC73493.1| hypothetical protein HMPREF0490_02912 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330408973|gb|EGG88434.1| hypothetical protein HMPREF0987_02660 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 246

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 25/174 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +   +      F         +D+ L  +   ++K +    LDLGTGTG + + L  ++ 
Sbjct: 17  HGYEIIQHPGRFCFG------MDAVLLSNFAAVKKGESA--LDLGTGTGIIPILLEAKTE 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
                G++I  ++ ++A+ +   N + ++      D   +        FDVI +NPPY+ 
Sbjct: 69  GEHFTGLEIQKESADMAQRSVAHNHLEQKITIQTGDIKEAGTIFSPASFDVITTNPPYML 128

Query: 177 SVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    + +     +   +LD           I    ++ L   G   +  
Sbjct: 129 GEHGLKNEADAKTIARHEVLCTLD----------DILRESAKLLKFKGRFYMVH 172


>gi|28378690|ref|NP_785582.1| methyltransferase (putative) [Lactobacillus plantarum WCFS1]
 gi|28271527|emb|CAD64431.1| methyltransferase (putative) [Lactobacillus plantarum WCFS1]
          Length = 252

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 19/188 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F    +  LL D A      ++ K    +I+DL  G GAV L        
Sbjct: 19  DIQIIQSSQVFAFSLDAVLLGDFA------QVAKGAKSQIVDLCAGNGAVGL-FASAKTQ 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
                V+I  +  E+A+ + + N ++++   L  D  +      +   D ++ NPPY + 
Sbjct: 72  GHITAVEIQPRLAEMAQRSVILNDLTQQMTVLNEDLLAITHQLPKDSVDTVLCNPPYFKD 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    V++ +P +++      LS     I    S  L  +G         +  D+ 
Sbjct: 132 Q-----PQSVKNPNPHLAIARHE--LSANLDQILAVTSDLLKMNGKAYFVHRPERLDDLF 184

Query: 237 RIFESRKL 244
               + +L
Sbjct: 185 SAMAANRL 192


>gi|307594946|ref|YP_003901263.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550147|gb|ADN50212.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 199

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 24/162 (14%)

Query: 63  VRLTLSSDTFEPRPE---TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +R+ + S+ + P  +   T  L+   ++  +        +RI+D+G+GTG + LA L+E 
Sbjct: 1   MRIKVLSNIYPPAEDSWQTAELLRWVVSNYI----GNKALRIIDVGSGTGILTLAALEEV 56

Query: 120 PFFKGVGVDISCK----ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPP 173
               G    +S      A    + N V NG+ +  D + ++    V+  F  D+IVSNPP
Sbjct: 57  VSRGGTAWVLSIDHDINASVSTRMNLVDNGLYQYADVVTANLLDPVKAEFHVDIIVSNPP 116

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           Y+               +    + GG  G+     I   V R
Sbjct: 117 YLPGNW----------HEDWR-IFGGPHGIEITVQIIHWVCR 147


>gi|324998204|ref|ZP_08119316.1| rRNA/tRNA methylase [Pseudonocardia sp. P1]
          Length = 522

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 15/132 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V  +LDLGTG G   L   + +   +    D+  +AL +A+ +   +GV    D  +
Sbjct: 158 RRPVGSLLDLGTGCGVQALHGSRHA--LRVTATDVLPRALALARLSCGLSGVD--VDLRE 213

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             WFS V G  FD +VSNPP++       +    R        D G  G S    +   +
Sbjct: 214 GPWFSPVAGERFDQVVSNPPFVPG--PPRVDYVYR--------DSGQAGDSALAALLGEL 263

Query: 214 SRHLNKDGLCSV 225
              LN  G+  +
Sbjct: 264 PGLLNPGGVAQL 275


>gi|260655696|ref|ZP_05861169.1| putative methyltransferase [Jonquetella anthropi E3_33 E1]
 gi|260629613|gb|EEX47807.1| putative methyltransferase [Jonquetella anthropi E3_33 E1]
          Length = 246

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 18/190 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D    +LT+      PR       D+ L     R+++R+  R L+LG  TG V   L+  
Sbjct: 7   DLLGGQLTIRQPVRGPRVNM----DTILLAGFVRLKRRE--RALELGCATGGVA-MLMAW 59

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
                  G++I  + +E+A+ NA +NG+S+R   +  D    W     G +DV+ +NPPY
Sbjct: 60  RSSAHVTGLEIDQRFVELARQNAESNGLSDRLSFVCGDLTQLWGRGQGGEYDVVAANPPY 119

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                +          + R +  G    LS    +    S  L   G   + +   +  D
Sbjct: 120 ---EEIGQGQP-CASPEDRTARQGSACTLSD---VCRAASWSLRDKGRLYMVMRARRLAD 172

Query: 235 VVRIFESRKL 244
            V    +  L
Sbjct: 173 TVACLRAASL 182


>gi|148657852|ref|YP_001278057.1| methyltransferase small [Roseiflexus sp. RS-1]
 gi|148569962|gb|ABQ92107.1| methyltransferase small [Roseiflexus sp. RS-1]
          Length = 198

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 2/93 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L  I       ILDLG G G + + L +  P  + +  D    A+  A+ NA
Sbjct: 39  VDEGTDLFLRTIAPDSPQTILDLGCGCGVIGIVLARWFPQARVILADRDLLAVRYARHNA 98

Query: 142 VTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
             N  +   + + S  F  +    FD+IVSN P
Sbjct: 99  ALNQ-TPNVEVIGSVGFEHIPALPFDLIVSNIP 130


>gi|74313138|ref|YP_311557.1| hypothetical protein SSON_2701 [Shigella sonnei Ss046]
 gi|73856615|gb|AAZ89322.1| putative enzyme [Shigella sonnei Ss046]
          Length = 285

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQVGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|332799053|ref|YP_004460552.1| 50S ribosomal protein L11 methyltransferase [Tepidanaerobacter sp.
           Re1]
 gi|332696788|gb|AEE91245.1| Ribosomal protein L11 methyltransferase [Tepidanaerobacter sp. Re1]
          Length = 314

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 81/213 (38%), Gaps = 51/213 (23%)

Query: 57  WRDFY-------NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEK------------R 96
           W+ +Y       N+ +  S + ++P R E  + +D  +AF     E             +
Sbjct: 113 WKKYYKPTHIGKNIVIKPSWEVYKPERDEIVVELDPGMAFGTGTHETTMLCLEILEKYIK 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + ++D+G G+G + +A  K     + + +D    A+ IA+ N   N +      ++ D
Sbjct: 173 KDITVIDVGCGSGILSIASGKLGAK-QVLAIDRDENAVRIARENIKRNNLETCVRAVKGD 231

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
              ++    D+IV+N   I  VI+D                           ++   + +
Sbjct: 232 KLQNINFKADIIVAN--IIADVIID---------------------------LSKDAALY 262

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
           L  +G+     I  ++K+ V+   E     L+ 
Sbjct: 263 LKDNGVFIASGIIKDRKLSVIEALEKNGFDLIE 295


>gi|227552620|ref|ZP_03982669.1| methyltransferase [Enterococcus faecium TX1330]
 gi|257888152|ref|ZP_05667805.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257896957|ref|ZP_05676610.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|293379099|ref|ZP_06625250.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
 gi|227178246|gb|EEI59218.1| methyltransferase [Enterococcus faecium TX1330]
 gi|257824206|gb|EEV51138.1| conserved hypothetical protein [Enterococcus faecium 1,141,733]
 gi|257833522|gb|EEV59943.1| conserved hypothetical protein [Enterococcus faecium Com12]
 gi|292642240|gb|EFF60399.1| methyltransferase small domain protein [Enterococcus faecium PC4.1]
          Length = 244

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSQVFSFS------LDAVLLAHFSRVPKKG--QIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N + E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLDEQMTVHTIDLKDSLSVIRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++     + +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDNSSKLLKTNGRFAMVHRPERFL 175

Query: 234 DVVRIFESR 242
           ++++I ++ 
Sbjct: 176 EIIQIMQNH 184


>gi|256422388|ref|YP_003123041.1| methyltransferase small [Chitinophaga pinensis DSM 2588]
 gi|256037296|gb|ACU60840.1| methyltransferase small [Chitinophaga pinensis DSM 2588]
          Length = 243

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+  V RILD+GTGTG + L L ++S      G+++   A   A++N   +   ER   +
Sbjct: 39  EQSPVSRILDIGTGTGLLSLMLAQQSEAA-ITGIELDPAAAGQARTNFDASPWKERLQVI 97

Query: 154 QSDWFSSVEG-LFDVIVSNPPYIESVI--VDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           ++D      G  +D IV+NPP+ E  +  VD L  +       I+LD        Y  + 
Sbjct: 98  ETDAKQLPAGEPYDFIVTNPPFYEGDLKSVDQLRNQAMH---AITLD--------YSELL 146

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             ++  L+  G  SV + Y    +   + E+    L    
Sbjct: 147 QVIATQLSAAGRFSVLLPYKPFAEFKALAETTGFSLQEVL 186


>gi|332289730|ref|YP_004420582.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
 gi|330432626|gb|AEC17685.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Gallibacterium anatis UMN179]
          Length = 276

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +     RILDLG GTG + L L + S    + VGV+I   A   A  N   +  S R 
Sbjct: 66  WADVAGANRILDLGCGTGLIALMLAQRSAADCQIVGVEIEENAYCQALDNVAISPWSARV 125

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV 178
                    +       FD+IV+NPPY ES 
Sbjct: 126 TIYHQSMQQFCRETSQRFDLIVANPPYFESA 156


>gi|331703060|ref|YP_004399747.1| methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010]
 gi|328801615|emb|CBW53768.1| Methyltransferase [Mycoplasma mycoides subsp. capri LC str. 95010]
          Length = 240

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 29/200 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +LG++   N +L   ++ F    ++ L+   A   +L   +K    +I D GT    + L
Sbjct: 7   LLGYK---NRKLYQDNEMFNFTLDSILV---ARFCNLNSKKK----KICDFGTNNAVIPL 56

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL-FDVIVS 170
            +L +    K +GV+I  KA++IA  N   NG+ ++ + + +D   FS +    FD++V 
Sbjct: 57  -ILSKYTKAKIIGVEIQNKAVKIANENIKLNGLEDQIEIIHADIKEFSKLHNQEFDLVVC 115

Query: 171 NPPYIE---SVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           NPP+ +   +  +  + LEV +   +  I+L            I    SR L   G  ++
Sbjct: 116 NPPFFKMDGNPKLKEISLEVANARHELLITL----------EDIIKSASRCLKNKGNFTI 165

Query: 226 EIGYNQKVDVVRIFESRKLF 245
                +  +++ +F    ++
Sbjct: 166 VHRSERLSEIINLFYKYNIY 185


>gi|262831234|sp|Q3YYU0|TRMN6_SHISS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 245

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQVGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|291541913|emb|CBL15023.1| ribosomal protein L11 methyltransferase [Ruminococcus bromii L2-63]
          Length = 311

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD+G G+G + +A L      + VGVDI   A+  A  NA  NGV++RF  +  
Sbjct: 169 KEGDSVLDVGCGSGILGIATLLLGAD-RAVGVDIDETAVRTAAENAEINGVADRFTAICG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +   VEG +D++++N   I +  +  L   ++DF
Sbjct: 228 SFTDKVEGKYDIVLAN---IVADAIMFLSKGIKDF 259


>gi|295399228|ref|ZP_06809210.1| ribosomal protein L11 methyltransferase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312110170|ref|YP_003988486.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y4.1MC1]
 gi|294978694|gb|EFG54290.1| ribosomal protein L11 methyltransferase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311215271|gb|ADP73875.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y4.1MC1]
          Length = 315

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +YN      + T+    +T+EP    EL+++              + +       
Sbjct: 115 TAWKKYYNPVKISEKFTIVPTWETYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALEK 174

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 175 YVKPGDTVIDVGTGSGILSIAAAMLGAKA-VRALDLDPVAVDSARLNVKLNKVQHIVTVS 233

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +E   +VIV+N                      ++              AD  
Sbjct: 234 QNNLLDHIEERANVIVAN---------------------ILA--------EIILRFADDA 264

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNAF 250
            R L  +G      G  Q    +V          +    
Sbjct: 265 YRLLENNGYFIT-SGIIQAKKQEVKDGLIKAGFTIEETL 302


>gi|118586640|ref|ZP_01544080.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163]
 gi|118432955|gb|EAV39681.1| biotin carboxyl carrier protein [Oenococcus oeni ATCC BAA-1163]
          Length = 204

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 68/197 (34%), Gaps = 36/197 (18%)

Query: 60  FYNVR--LTLSSDTF-EPRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           F          +  F + R +  T++L+++         ++    +ILDLGTG G V ++
Sbjct: 26  FAGRELIFKTDAGVFSKLRVDFGTKVLLETIH----SHFQELPDGKILDLGTGYGPVGIS 81

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L    P  +   VD++ ++L +AK N   N  S      QS+ + +V G +  I+ NPP 
Sbjct: 82  LKVLKPDLEIDMVDVNQRSLNLAKDNLELNDFSANV--FQSNIYENVAGNYAAIIVNPPI 139

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                                      G +    +     +HL   G+    +   Q   
Sbjct: 140 RA-------------------------GKAVVTKMLVESKKHLINGGIILAVLQKKQGAP 174

Query: 235 VVRIFESRKLFLVNAFK 251
                       V   K
Sbjct: 175 SAERNLKNTFENVEILK 191


>gi|257452715|ref|ZP_05618014.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|317059256|ref|ZP_07923741.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684932|gb|EFS21767.1| methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 242

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   +D F    ++ L+ +            +   +ILDLGTG  A+ L L  ++  
Sbjct: 13  GLKIIQRNDYFNFSLDSLLISEFVKI-------NKQSKKILDLGTGNAAIPLFLSLKTTG 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE- 176
            +  G++I   + ++A  N V N + E+   L  D  +  E      FD++VSNPP+ E 
Sbjct: 66  -QIYGLEIQKVSYDLAIKNIVLNHLEEQIQILHGDMKNWQEFFPRNSFDIVVSNPPFFEF 124

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                ++ D   L +   +  I+L            +    S  + + G   +    ++ 
Sbjct: 125 HGNRELLNDLDQLTLARHEISITL----------EELIQVASNLVKEHGYFYLVHRADRL 174

Query: 233 VDVVRIFESRKL 244
            D+  +    +L
Sbjct: 175 ADIFELCRKYQL 186


>gi|253687014|ref|YP_003016204.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753592|gb|ACT11668.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 348

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W D Y    V +      F  R +    +D      L   E     ++LD+  G G +  
Sbjct: 158 WWDEYVTDGVIVKTLPGVFS-RDD----LDPGSRLLLSTFEPHMKGKVLDIACGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K+SP  +    D+S  A+E +K+    N +    + + S+ +S + G FD+IVSNPP
Sbjct: 213 VLAKQSPKIRLTLSDVSAAAVESSKATLTANALEG--EVIASNVYSDINGRFDMIVSNPP 270

Query: 174 YIESVIVDCLGLE 186
           + + +       E
Sbjct: 271 FHDGLQTSLQAAE 283


>gi|120554858|ref|YP_959209.1| methyltransferase small [Marinobacter aquaeolei VT8]
 gi|120324707|gb|ABM19022.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Marinobacter aquaeolei VT8]
          Length = 379

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 21/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               RILDL  G G + L+ L   P  +    D+S +A+   + N       +       
Sbjct: 233 PPAGRILDLACGNGVLGLSALAGRPGAEVHFSDVSSQAIASVEHNLSRYEGGDCVHLWHQ 292

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  +     + +I+ NPP+                +      GG+ G      +    +R
Sbjct: 293 DGIADDLPDYQLILLNPPF---------------HE------GGVVGDHIALRLFRDAAR 331

Query: 216 HLNKDGLCSV 225
           HL   G   +
Sbjct: 332 HLAPGGRVLM 341


>gi|291336398|gb|ADD95955.1| hypothetical protein [uncultured organism MedDCM-OCT-S04-C1]
          Length = 450

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 24/164 (14%)

Query: 27  DSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV------RLTLSSDTFEPRPETEL 80
           D V             V  L+ E          F++        L +    + PR +T+L
Sbjct: 4   DEVFSAED----AELEVERLQREP------SASFWSPAEGTKFTLIIPPTVYPPREDTDL 53

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L    ++     +      + L++GTG+G   L++L     +K  G D++  A+     N
Sbjct: 54  LARRIIS-----LGPGRGRKFLEVGTGSG--ALSILANYMGWKVSGCDVNPFAVAATAGN 106

Query: 141 AVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              NG +    +             FD+I+ N PYI+   ++ +
Sbjct: 107 LSANGFNGDIREGGVGPEPFPFNEKFDLIIWNLPYIDPKDIEQV 150


>gi|302541537|ref|ZP_07293879.1| methyltransferase domain protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302459155|gb|EFL22248.1| methyltransferase domain protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 225

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +      TL  D F P      L   +L      +E       L++G+G G + +     
Sbjct: 25  ELSGKEWTLLPDVFSPAHSKSSLAHLSL------LEFPVGGTFLEIGSGIGLIAVEAALA 78

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIV--SNPPY 174
                    D++  A++  + NA   GV++R   + SD F ++     FDV+   SN  +
Sbjct: 79  GCRA-VYATDLNPAAVKNTELNAERFGVADRVTAVHSDLFDALHDAPAFDVVYWHSNNVW 137

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                +D    E+   DP         G   +R        HL   G   +
Sbjct: 138 APP-ELDLTAHELAYVDP---------GYEAHRRYFREARNHLAPGGRVLI 178


>gi|57641719|ref|YP_184197.1| SAM-dependent methyltransferase [Thermococcus kodakarensis KOD1]
 gi|57160043|dbj|BAD85973.1| predicted SAM-dependent methyltransferase, DUF890 family
           [Thermococcus kodakarensis KOD1]
          Length = 248

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 28/244 (11%)

Query: 15  TGLS-SHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            GL     + V P+    +D+  R   +N   R L + +I R +     + + +      
Sbjct: 9   LGLPVKEALKVFPELGKYIDESGRLDFSNREARILYNRAIARAI-----FGLDVEYHPKG 63

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
               P +  L          +   R   ++L++GTG  A+   + +          ++  
Sbjct: 64  LVTTPISRYL--------FLKTFLRGGEKVLEIGTGHTAMMALMAERLFNCDVTATELDE 115

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  E AK N   NG + +           V      FDVI S PPY E+     L     
Sbjct: 116 EFFEYAKRNIEKNGANVKPIKSNGGIIRGVVPKGERFDVIFSAPPYYEAPTRGVLTE--- 172

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
               +  + GG  G +    + +    +LN  G  ++ +    K  ++     +   L  
Sbjct: 173 ----KEGVGGGRYGEAFSVRLIEEALEYLNPGGKVALFLPD--KEPLIEAIAEKGKELGY 226

Query: 249 AFKD 252
           + +D
Sbjct: 227 SVRD 230


>gi|167375377|ref|XP_001733615.1| n6-DNA-methyltransferase [Entamoeba dispar SAW760]
 gi|165905203|gb|EDR30269.1| n6-DNA-methyltransferase, putative [Entamoeba dispar SAW760]
          Length = 210

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 18/161 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + ++P  ++ LL+ + L      I   + +  L++G G+G V   + +  P       DI
Sbjct: 18  NVYKPDVDSYLLM-NVLEKERDFINSHEPMTSLEIGVGSGIVSKYVKELFPRITTFCSDI 76

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  ALE  K       V +  + ++S    S+ +   D+ + NPPY+ +   + L     
Sbjct: 77  NPYALECTKK------VHKEGNLIKSSLIESIRDESIDLFIYNPPYVPTPE-EELHHSYL 129

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
                +S  GG DG      + + +   L+  G     IGY
Sbjct: 130 S----LSWAGGKDGREKIDCVIEHLWDILSPRG-----IGY 161


>gi|294501301|ref|YP_003565001.1| ribosomal protein L11 methyltransferase [Bacillus megaterium QM
           B1551]
 gi|294351238|gb|ADE71567.1| ribosomal protein L11 methyltransferase [Bacillus megaterium QM
           B1551]
          Length = 313

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 54/218 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+      R T+      +E     EL+++     +         V        
Sbjct: 112 TAWKKYYHPVKISERFTIVPTWENYEKVSTDELIIELDPGMAFGTGTHPTTVMSLQALER 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +             +D+   A+  A  N   N V       
Sbjct: 172 TVKAGDTVIDVGTGSGVLSIGAAL-LGASNVQALDLDEVAVRSAGENIELNQVGNVVTVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +EG  D++V+N                      ++               D  
Sbjct: 231 QNNLLQGIEGPVDIVVAN---------------------ILA--------EVIVRFVDDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           ++ L   G+      I    K DV +        +   
Sbjct: 262 AKVLKPGGMFITSGIISAK-KEDVKKALTGAGFVIQEV 298


>gi|323340835|ref|ZP_08081087.1| methyltransferase [Lactobacillus ruminis ATCC 25644]
 gi|323091958|gb|EFZ34578.1| methyltransferase [Lactobacillus ruminis ATCC 25644]
          Length = 248

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 19/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  SS+ F    +  LL D A         K+   +I+DL  G GAV L L  +S  
Sbjct: 18  GIKIIQSSEVFSFSLDAVLLADFA------NPAKKKEQKIVDLCAGNGAVGLFLTPKS-S 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   V+I  +  ++AK +   NG+ ER   +  D  +  +       D +  NPPY   
Sbjct: 71  AQIYEVEIQPRLADMAKRSIDLNGLEERVTVINDDLNNVFDYLAKDSIDTVTCNPPYF-- 128

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              +      ++ +  ++L      L+       +  S  L  +G  S      + ++++
Sbjct: 129 ---EDQPDSKKNPNQYLALARHE--LAVTLEQTIEQASGLLKMNGRVSYVHRPERLIEMI 183

Query: 237 RIFESRKLFLVNA 249
            + +  +L     
Sbjct: 184 ELMKKHRLEPKRV 196


>gi|188996160|ref|YP_001930411.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931227|gb|ACD65857.1| methyltransferase small [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 247

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 20/163 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++    + +    ++ LLVD         +  +   +I+D+GTG+G + + +  +    
Sbjct: 21  IKIIQKREGYRFNIDSLLLVDF--------LNIKSSGKIIDIGTGSGIIPILISLKYKNL 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIV 180
           K   +++     +IAK N   N V  +           +     FD +V NPPY +    
Sbjct: 73  KLYALEVQEDLFDIAKRNFQINNVHVQIALGNVKDVKKIYNHQYFDYVVINPPYFKEGNY 132

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             +  ++   +           L+       G    L   G  
Sbjct: 133 KNIQEKIARSE----------ALAKLEDFIYGSWYLLKNKGKL 165


>gi|148265792|ref|YP_001232498.1| methyltransferase small [Geobacter uraniireducens Rf4]
 gi|146399292|gb|ABQ27925.1| methyltransferase small [Geobacter uraniireducens Rf4]
          Length = 256

 Score = 74.7 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 26/179 (14%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +PR      +D  L      I  R   R +DLG+G G + L L +E+      GV+    
Sbjct: 19  QPRDGYRFSLDPLLLCDFAAI--RTGERAIDLGSGCGIIPLILAREAEDVTVTGVEFQAL 76

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPYIESVIVDCLGLEV 187
             ++A  N   NG+ +R   L +D  +S++G      FD++VSNPPY  +          
Sbjct: 77  LADLALRNVSINGLGDRISILAADI-TSLKGVFPVSSFDLVVSNPPYRRAGTGRVSPRAG 135

Query: 188 RD---FDPRISLDGGIDGLSHYRTIADGVSRHL-NKDGLCSVEIGYNQKVDVVRIFESR 242
           RD    +    L                 +++L    G             +V +F   
Sbjct: 136 RDKARHESTACLT------DFL-----TAAKYLVKPGGRICFI---YHPSRLVELFAEA 180


>gi|167384610|ref|XP_001737025.1| n6-DNA-methyltransferase [Entamoeba dispar SAW760]
 gi|165900382|gb|EDR26715.1| n6-DNA-methyltransferase, putative [Entamoeba dispar SAW760]
          Length = 210

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 18/161 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + ++P  ++ LL+ + L      I   + +  L++G G+G V   + +  P       DI
Sbjct: 18  NVYKPDVDSYLLM-NVLEKERDFINSHEPMTSLEIGVGSGIVSKYVKELFPRITTFCSDI 76

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  ALE  K       V +  + ++S    S+ +   D+ + NPPY+ +   + L     
Sbjct: 77  NPYALECTKK------VHKEGNLIESSLIESIRDESIDLFIYNPPYVPTPE-EELHHSYL 129

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
                +S  GG DG      + + +   L+  G     IGY
Sbjct: 130 S----LSWAGGKDGREKIDCVIEHLWDILSPRG-----IGY 161


>gi|126654237|ref|ZP_01726031.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905]
 gi|126589295|gb|EAZ83452.1| hypothetical protein BB14905_22023 [Bacillus sp. B14905]
          Length = 200

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 73/210 (34%), Gaps = 54/210 (25%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++      +  F        + +L+D   AF +P I+      I D+G G G + L++ K
Sbjct: 26  HSFSFETDAGVFSKSEVDFGSRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAK 78

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPPYI 175
            +P      +DI+ +A+ +++ NA  NGV        SD  S V+   +   I++NPP  
Sbjct: 79  ANPDRTVCMMDINERAVALSQKNAQVNGVQ-NVRIFVSDGLSMVDKDIEAAAILTNPPIR 137

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-- 233
                                     G        DG    L   G   V I   Q    
Sbjct: 138 A-------------------------GKETIFRFYDGAYDRLVSSGELWVVIQKKQGAPS 172

Query: 234 ------------DVVRIFESRKLFLVNAFK 251
                       DVV   + +  ++V A K
Sbjct: 173 TVSYLEGKFSEVDVVE--KKKGYWIVRAKK 200


>gi|320155418|ref|YP_004187797.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
 gi|319930730|gb|ADV85594.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
          Length = 340

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 38/176 (21%)

Query: 59  DFYNVRLTLS---------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            F +  + +             F        L    L  +LP +      ++LD G G G
Sbjct: 159 WFRHYSINIHGQQLEIQSLPGVFSHGEFD--LGSQLLLETLPSLSG----KVLDFGCGAG 212

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            +   + K +P  +    DI+  AL  +++    NG+  R     SD +S     +  I+
Sbjct: 213 VIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGRVFA--SDIYSDTADDYRFII 270

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           SNPP+   +  +    E                     T+     +HLN  G   +
Sbjct: 271 SNPPFHSGLDTNYNAAE---------------------TLLGQAPQHLNNQGELII 305


>gi|37680915|ref|NP_935524.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
 gi|81859839|sp|Q7MHY6|RSMC_VIBVY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|37199665|dbj|BAC95495.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
          Length = 340

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 38/176 (21%)

Query: 59  DFYNVRLTLS---------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            F +  + +             F        L    L  +LP +      ++LD G G G
Sbjct: 159 WFRHYSINIHGQQLEIQSLPGVFSHGEFD--LGSQLLLETLPSLSG----KVLDFGCGAG 212

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            +   + K +P  +    DI+  AL  +++    NG+  R     SD +S     +  I+
Sbjct: 213 VIGAFMAKRNPTIELEMCDINAYALASSEATLAANGLQGRVFA--SDIYSDTADDYRFII 270

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           SNPP+   +  +    E                     T+     +HLN  G   +
Sbjct: 271 SNPPFHSGLDTNYNAAE---------------------TLLGQAPQHLNNQGELII 305


>gi|168493437|ref|ZP_02717580.1| methyltransferase [Streptococcus pneumoniae CDC3059-06]
 gi|225861367|ref|YP_002742876.1| methyltransferase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230731|ref|ZP_06964412.1| methyltransferase [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254948|ref|ZP_06978534.1| methyltransferase [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298503272|ref|YP_003725212.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|183576396|gb|EDT96924.1| methyltransferase [Streptococcus pneumoniae CDC3059-06]
 gi|225728224|gb|ACO24075.1| methyltransferase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238867|gb|ADI69998.1| methyltransferase [Streptococcus pneumoniae TCH8431/19A]
 gi|327389722|gb|EGE88067.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA04375]
 gi|332200098|gb|EGJ14171.1| methyltransferase small domain protein [Streptococcus pneumoniae
           GA47368]
          Length = 249

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 74/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAHIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L            I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------EEICHSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLKRHNL 191


>gi|167747821|ref|ZP_02419948.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662]
 gi|167653183|gb|EDR97312.1| hypothetical protein ANACAC_02543 [Anaerostipes caccae DSM 14662]
          Length = 250

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 19/176 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  S  +++K     +LDLGTGTG + + +  ++P     G++I  +   +A  +A
Sbjct: 32  MDAVLLSSFVKVKKNGN--VLDLGTGTGILPILMEAKTPGRHFTGLEIQSEMAGMAARSA 89

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             NG+ E+ + ++ D   +        FDVI SNPPY+ +        + +     +   
Sbjct: 90  ALNGLEEKIEIVEGDITKASAIFSHDSFDVITSNPPYMVNDHGFRNPNDAKAIARHEI-- 147

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                   L  +R I+      L   G   +     +  +++    +  L      
Sbjct: 148 --------LCRFRDISGAARVLLKHSGSLFLVHRSYRLSEILNCLSNDGLEPKRIR 195


>gi|307704420|ref|ZP_07641332.1| methyltransferase small domain protein [Streptococcus mitis SK597]
 gi|307622033|gb|EFO01058.1| methyltransferase small domain protein [Streptococcus mitis SK597]
          Length = 249

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILAVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPAYIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------QEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDTLQRHNL 191


>gi|227357396|ref|ZP_03841752.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           ATCC 29906]
 gi|227162476|gb|EEI47470.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 38/173 (21%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ +    LT+ +    P   ++  +D      L   +   V  +LD+  G G +   L 
Sbjct: 159 WQTYRYDDLTVMA---LPGVFSQTALDEGSRLLLSTFDDTMVGDLLDMACGCGVIATVLG 215

Query: 117 KESPFFKGVGVDISCKAL--EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K++P  K    D++  A+   IA  N   N +  R   + S+ +S+VE  +D IVSNPP+
Sbjct: 216 KKNPMLKLTLCDVNAAAISSSIATLNV--NELEGRV--IASNVYSAVEETYDWIVSNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGL----SHYRTIADGVSRHLNKDGLC 223
                                     DGL         I       L K G  
Sbjct: 272 -------------------------HDGLGTSYQAAEDIIRLAPNFLKKGGKL 299


>gi|197286343|ref|YP_002152215.1| 16S ribosomal RNA m2G1207 methyltransferase [Proteus mirabilis
           HI4320]
 gi|226712960|sp|B4EWW4|RSMC_PROMH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|194683830|emb|CAR44934.1| ribosomal RNA small subunit methyltransferase C [Proteus mirabilis
           HI4320]
          Length = 337

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 38/173 (21%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ +    LT+ +    P   ++  +D      L   +   V  +LD+  G G +   L 
Sbjct: 159 WQTYRYDDLTVMA---LPGVFSQTALDEGSRLLLSTFDDAMVGDLLDMACGCGVIATVLG 215

Query: 117 KESPFFKGVGVDISCKAL--EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           K++P  K    D++  A+   IA  N   N +  R   + S+ +S+VE  +D IVSNPP+
Sbjct: 216 KKNPMLKLTLCDVNAAAISSSIATLNV--NELEGRV--IASNVYSAVEETYDWIVSNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGL----SHYRTIADGVSRHLNKDGLC 223
                                     DGL         I       L K G  
Sbjct: 272 -------------------------HDGLGTSYQAAEDIIRLAPNFLKKGGKL 299


>gi|90406831|ref|ZP_01215023.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
 gi|90312068|gb|EAS40161.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
          Length = 348

 Score = 74.4 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 7/125 (5%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++ +      F         +D   +  L  +  +    ILD G G G +   LL +   
Sbjct: 177 HLDICSLPGVFSYGA-----LDQGSSLLLQSLPNKISGNILDFGCGAGVIACYLLTKYSD 231

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                +D++  AL  AK + + N +    +   SD FS V   +D+++SNPP+      D
Sbjct: 232 LNVDLIDVNVYALASAKLSLLKNNLEG--EVFPSDVFSDVNKKYDLLISNPPFHSGKETD 289

Query: 182 CLGLE 186
               E
Sbjct: 290 YQAAE 294


>gi|325286600|ref|YP_004262390.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
           7489]
 gi|324322054|gb|ADY29519.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga lytica DSM
           7489]
          Length = 245

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 35/172 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   ILD+G GTG + L L + S       +++   A E   +N   +  ++R     +
Sbjct: 36  HNPYSILDIGAGTGIIALMLAQRSAADNIEAIELDADAYEQCTNNFEASDWADRLFCFHA 95

Query: 156 DWFSSV----------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            +   V          + L+D+IVSNPP+    +                   G     +
Sbjct: 96  GFDEFVDEYATDETEEDELYDLIVSNPPFYAEEV-----------------TSGNKARDN 138

Query: 206 YRT--------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            R         +  GV++ L  +G  +  I Y ++ + +++ E+ KL+ +  
Sbjct: 139 ARQNTSLPFSELVSGVAKLLTTNGRFATIIPYKEEEEFIKLAENFKLYPLKI 190


>gi|314988719|gb|EFT32810.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA3]
          Length = 206

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +       V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I S PP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSTPP--------IRVGKAALHEILTTWLA---------RLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRIIDVH 205


>gi|160876751|ref|YP_001556067.1| methyltransferase small [Shewanella baltica OS195]
 gi|262828688|sp|A9L1L1|TRMN6_SHEB9 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|160862273|gb|ABX50807.1| methyltransferase type 12 [Shewanella baltica OS195]
 gi|315268951|gb|ADT95804.1| methyltransferase small [Shewanella baltica OS678]
          Length = 238

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 15/163 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+G G+G + L +  +        V++   A E  + N   +  + R  
Sbjct: 29  WAQLTAAKTVLDIGAGSGLLSL-MAAQRSQAHITSVELDTSAAEACQHNFHNSPWANRLT 87

Query: 152 TLQS---DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + S   D+   +E    FD I+ NPPY E                  ++    D LS  
Sbjct: 88  LVNSSIQDFCQQIEYQEYFDHIICNPPYFEQGTQAIQSQ--------RAMARHTDSLSFA 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             + D +   L   G  S+ +          I    +L L+  
Sbjct: 140 -ALLDAIHVCLAPQGNASLILPMQSMARFNEILAHSQLSLIEI 181


>gi|305665426|ref|YP_003861713.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170]
 gi|88710181|gb|EAR02413.1| hypothetical protein FB2170_03980 [Maribacter sp. HTCC2170]
          Length = 237

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 64/162 (39%), Gaps = 28/162 (17%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + +   ILD+GTGTG + L   + S       +++   A E    N   +   +R     
Sbjct: 35  QNEPESILDIGTGTGLIALMAAQRSEAETIDAIEVEEGAYEQCVDNFEASPWGDRLFCYH 94

Query: 155 SDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT--- 208
           +        +E  +D+IVSNPP+    +                   G +     R    
Sbjct: 95  AGLDEFVDEIEDKYDLIVSNPPFYAEDV-----------------TSGNNARDKARQNQS 137

Query: 209 -----IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                + DGVS+ L+++G+ +V + Y ++   + +  +  L+
Sbjct: 138 LPFDELIDGVSKLLSQNGVFTVIVPYKEEHFFLALANNSGLY 179


>gi|325109882|ref|YP_004270950.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis
           DSM 5305]
 gi|324970150|gb|ADY60928.1| rRNA (guanine-N(2)-)-methyltransferase [Planctomyces brasiliensis
           DSM 5305]
          Length = 366

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 9/125 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      F  R      +D+     +  ++  D + +LDLG G GAV LA ++ +   
Sbjct: 196 LVLKTRPGVFSHRR-----MDAGGWALIKALDVIDDMTVLDLGCGCGAVGLAAMRAAKNV 250

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV 178
               +D   +A++  + NA  N   ++     +        + E  FD++ +NPPY    
Sbjct: 251 DVTAIDSHARAIQCTEENAKRNLSEDQLARFTTKLTHTATLAPEAKFDIVAANPPYFSQY 310

Query: 179 IVDCL 183
            +  L
Sbjct: 311 KIAEL 315


>gi|153002035|ref|YP_001367716.1| methyltransferase small [Shewanella baltica OS185]
 gi|262828685|sp|A6WS64|TRMN6_SHEB8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|151366653|gb|ABS09653.1| methyltransferase small [Shewanella baltica OS185]
          Length = 238

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 15/163 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+G G+G + L +  +        V++   A E  + N   +  + R  
Sbjct: 29  WAQLTAAKTVLDIGAGSGLLSL-MAAQRSQAHITSVELDTSAAEACQHNFHNSPWANRLT 87

Query: 152 TLQS---DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + S   D+   +E    FD I+ NPPY E                  ++    D LS  
Sbjct: 88  LVNSSIQDFCQQIEYQEYFDHIICNPPYFEQGTQAIQSQ--------RAMARHTDSLSFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             + D +   L   G  S+ +          I    +L L+  
Sbjct: 140 -ALLDAIHVCLAPQGNASLILPMQSMARFNEILAHSQLSLIEI 181


>gi|39995743|ref|NP_951694.1| hypothetical protein GSU0637 [Geobacter sulfurreducens PCA]
 gi|39982507|gb|AAR33967.1| conserved hypothetical protein [Geobacter sulfurreducens PCA]
 gi|298504754|gb|ADI83477.1| O-methyltransferase, putative [Geobacter sulfurreducens KN400]
          Length = 258

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 75/208 (36%), Gaps = 27/208 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y++++    D +    +  LL   A +         +  R +DLGTG+G + L L +  P
Sbjct: 18  YDLKILQQRDGYRFSLDPLLLC--AFSCLT------EGGRGIDLGTGSGIIPLVLARRCP 69

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIE 176
               VGV+   +   +A+ N   NG++ER   L+ D            FD+++SNPPY  
Sbjct: 70  GSTFVGVEFQERMAHLAERNVHLNGLAERIAILREDVLGLRRRFPVSSFDLVLSNPPYRR 129

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                      RD       D   +  +      +     +   G         +  +++
Sbjct: 130 RGTGKISPRAGRD-------DARHESTATLADFLESAKYLVKTTGRICFIYHPARLPELM 182

Query: 237 RIFESRKLFLVNAFKDYGGNDRVLLFCR 264
               S KL  +          R++   R
Sbjct: 183 AHAASLKLACLRL--------RLVHGTR 202


>gi|313886340|ref|ZP_07820065.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312924209|gb|EFR34993.1| methyltransferase domain protein [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 244

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL             ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +
Sbjct: 25  ALFLGAWARTAHTASQVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFYRS 84

Query: 145 GVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDC 182
              +R   L  D  +         +D+I+SNPPY + +    
Sbjct: 85  PYGDRLTALSCDITAPELALPPRTYDLIISNPPYYDGLQPAT 126


>gi|294785502|ref|ZP_06750790.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_27]
 gi|294487216|gb|EFG34578.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_27]
          Length = 223

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSNNEFLSELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANMALELNKIEKNIQFECMDIREYKNSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   G        ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGSLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|284033968|ref|YP_003383899.1| methyltransferase small [Kribbella flavida DSM 17836]
 gi|283813261|gb|ADB35100.1| methyltransferase small [Kribbella flavida DSM 17836]
          Length = 206

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 64/187 (34%), Gaps = 35/187 (18%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKES 119
            +   T +S  F  R      +D   A  L  +      ++ LDLG G G +   L  E+
Sbjct: 26  RDYEFTTASGVFS-RDR----LDIGTAVLLREVRPTPGRKVVLDLGAGYGPIACGLAVEN 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP-PYIESV 178
           P      VD++ +ALE+   NA   GV +R      D     +  FD I SNP  +I   
Sbjct: 81  PDAVVWAVDVNNRALELTAINAAAAGVGDRVHPALPDDVPD-DVRFDEIWSNPAIHIGKP 139

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN-QKVDVVR 237
            +  +                         +   +SR L   G   + +G N     + R
Sbjct: 140 ELHKM-------------------------LLRWLSR-LKPGGTAWLVVGKNLGGDSLQR 173

Query: 238 IFESRKL 244
               +  
Sbjct: 174 WLTEQGY 180


>gi|239827773|ref|YP_002950397.1| ribosomal protein L11 methyltransferase [Geobacillus sp. WCH70]
 gi|239808066|gb|ACS25131.1| ribosomal protein L11 methyltransferase [Geobacillus sp. WCH70]
          Length = 315

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 68/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +YN      + T+    +T+EP    EL+++              + +       
Sbjct: 115 TAWKKYYNPVKISEKFTIVPTWETYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALEK 174

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 175 YMKPGDTVIDVGTGSGILSIAAAMLGAKS-VRALDLDPVAVDSARLNVKLNKVQHIVTVS 233

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +E   +VIV+N                      ++               D  
Sbjct: 234 QNNLLDHIEEQANVIVAN---------------------ILA--------EIILRFVDDA 264

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNAF 250
            R L K+G      G  Q    +V          +    
Sbjct: 265 YRLLEKNGYFIT-SGIIQAKKQEVKEGLMKAGFAIEETL 302


>gi|167462406|ref|ZP_02327495.1| methyltransferase [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 251

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 26/197 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +  S + F    +  LL   A   ++P     +  +I+DL TG G + L LL    
Sbjct: 18  HGLHIIQSEEVFSFSLDAVLL---ARFCTVP-----NKGKIMDLCTGNGVIPL-LLSTRT 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                G++I  K  ++A  N   N + E+   +  D     +    G FD++  NPPY+ 
Sbjct: 69  KAHIWGIEIQQKLADMAMRNVDLNMLQEQLHMIHGDLRHIYQVLGTGQFDLVTVNPPYLP 128

Query: 177 SVIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
               +    E       +   +L            +    S+ L   G  ++    ++ V
Sbjct: 129 VPTGEKNKNEHVAAARHEIFCTL----------EDVIVVASKLLRTGGKMAMVHRSSRLV 178

Query: 234 DVVRIFESRKLFLVNAF 250
           D+  +    ++      
Sbjct: 179 DICFLMRQYRIEPKRIR 195


>gi|229169060|ref|ZP_04296776.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH621]
 gi|228614469|gb|EEK71578.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH621]
          Length = 312

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 69/220 (31%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +  +  
Sbjct: 172 TVQPGDTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDDIVNVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      IG  +K+ + +  E+    +    +
Sbjct: 262 ARVVKPGGLFITSGIIGAKEKI-ISKALETAGFSIEEVLR 300


>gi|239637473|ref|ZP_04678447.1| methyltransferase [Staphylococcus warneri L37603]
 gi|239596918|gb|EEQ79441.1| methyltransferase [Staphylococcus warneri L37603]
          Length = 241

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 26/204 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + D F    +  LL D          E R   +I+D+ +G G + L L  +   
Sbjct: 15  DLKIIQNDDVFSFSTDALLLGDF--------TEIRKKDKIIDICSGNGVIPLLLSHKGSQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIES 177
               G++I  + ++ AK +   N + +R    Q D    +       + V+  NPPY + 
Sbjct: 67  -TIEGIEIQQQLVDTAKRSFKYNQLDDRLLMHQMDVKKVYHHFKPSQYTVVTCNPPYFKD 125

Query: 178 VIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +     E   V   +    L                    L + G   +     + +D
Sbjct: 126 NQLHQHQKEAHKVARHEILCKL----------EDCLMAARHLLKQGGRLYMVHRAERMMD 175

Query: 235 VVRIFESRKLFLVNAFKDYGGNDR 258
           V+       +        Y  +DR
Sbjct: 176 VLTEMRRANIEPKRLTFVYSKHDR 199


>gi|124028495|ref|YP_001013815.1| hypothetical protein Hbut_1656 [Hyperthermus butylicus DSM 5456]
 gi|123979189|gb|ABM81470.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 215

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
              ++ L+   + +EP  +T L    AL      +       +LD+G GTG + +    +
Sbjct: 18  PLGDLVLSCCENVYEPAEDTWL----ALDILEKTLVSNGYSIVLDVGCGTGVLGVYTAAK 73

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
           +  +  + +D++  A   AK+N    G+S   D +Q D  + +   G   + V N PY+ 
Sbjct: 74  TKTYTVL-IDVNPCATYCAKTNTERLGLSAYVDIVQCDNATCIRRLGTRTLAVYNTPYLP 132

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               D L          ++  G   GL   + I D     
Sbjct: 133 VEEYDELLG--------LAWSG---GLREAQRIVDIAGEW 161


>gi|308177328|ref|YP_003916734.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307744791|emb|CBT75763.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 408

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 75/194 (38%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++  +  TF P R E   LV  A           D+    D+GTGTG +  A+L    
Sbjct: 201 GAKIHPAYGTFMPTRQEYVDLVAVA--------PLEDLSLAFDIGTGTGVLS-AVLAHRG 251

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + +G DI  +A++ A  N    G+S       +  F   EG   ++V NPP++     
Sbjct: 252 VKQVIGTDIHQRAVDCANDNFARLGISAAAHAQLTSMFP--EGRAPLVVCNPPWLPGSAP 309

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD--GLCSV----E-IGYNQKV 233
             L   + D + ++                 G+  HL K+  G   +    E +G   + 
Sbjct: 310 STLDAAIYDPESKM-----------LMQFLRGLPGHLTKNGEGWLIISDLAELLGLRTRA 358

Query: 234 DVVRIFESRKLFLV 247
            ++   E+  L ++
Sbjct: 359 LLLEAIEAAGLEVI 372


>gi|288930668|ref|YP_003434728.1| methylase [Ferroglobus placidus DSM 10642]
 gi|288892916|gb|ADC64453.1| methylase [Ferroglobus placidus DSM 10642]
          Length = 192

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 21/195 (10%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            + F    L      +E   ++ELL+++A+       E ++   ++++G G+G V   L 
Sbjct: 4   RKKFRQKFLRRLPTVYEVAEDSELLLEAAME------EVKEEDVVIEIGAGSGFVSEKLK 57

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            +  F   +  DI+  A ++ K         +  + + +D F  ++G F +I+ NPPY+E
Sbjct: 58  GKCKFL--LATDINPHAAKMCKE--------KGLEVVIADLFRGIKGKFTLILFNPPYLE 107

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
               + +G  +       ++DGG  G+             L ++G   +    +    + 
Sbjct: 108 LEEEEKVGDWLEK-----AIDGGRGGIEVSVEFLKQAKEKLKENGRIILISSSHNFERLK 162

Query: 237 RIFESRKLFLVNAFK 251
              E          K
Sbjct: 163 EEIEKLGYKFEVVKK 177


>gi|34762348|ref|ZP_00143351.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27888002|gb|EAA25066.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 223

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++   +T LL              +  +++LD+GTG G + + L       + +G+DI  
Sbjct: 24  YKYGEDTILL-----FKLFQASLNKKNIKLLDIGTGNGILPILLSDNEFLSELIGIDIQK 78

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVR-- 188
           + ++ A      N + +       D         FDVI+SNPPY++         E +  
Sbjct: 79  ENIDRANMALELNKIEKNIQFECMDIREYKNSNYFDVIISNPPYMDDNGKKINENEHKAI 138

Query: 189 -DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              + ++SL            +     R L   G        ++ V++++  +     + 
Sbjct: 139 SRHEIKLSLS----------ELISNAKRLLKPIGSLYFIHRTHRLVEIIKTLDKNNFSVK 188

Query: 248 NAF 250
              
Sbjct: 189 KII 191


>gi|118579841|ref|YP_901091.1| methyltransferase small [Pelobacter propionicus DSM 2379]
 gi|118502551|gb|ABK99033.1| methyltransferase small [Pelobacter propionicus DSM 2379]
          Length = 268

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 64/197 (32%), Gaps = 16/197 (8%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +PR      +D+ L      +   D  R+ DLGTG G + L L +       VG + +  
Sbjct: 44  QPRQGYRFSLDALL--LADFVACADDARLADLGTGCGVIPLLLCRRFGSATAVGFESNGS 101

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVR 188
              +A  NA  NG+ +R   ++ D            FD + +NPP+             R
Sbjct: 102 MARLAAENARRNGLEQRAAFVERDILELRRHYPVSSFDGVTANPPFRTPQSGRISPRAGR 161

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           D     S  G  D               +   G         +  + + +     L L+ 
Sbjct: 162 DTARHESSAGLSD-------FLATAKYLVKPGGRIWFVHLPERLAEFIHVAAGLNLSLLR 214

Query: 249 ---AFKDYGGNDRVLLF 262
                 D G   R+ L 
Sbjct: 215 LRMVHPDQGSPARIFLA 231


>gi|229543806|ref|ZP_04432865.1| ribosomal protein L11 methyltransferase [Bacillus coagulans 36D1]
 gi|229324945|gb|EEN90621.1| ribosomal protein L11 methyltransferase [Bacillus coagulans 36D1]
          Length = 312

 Score = 74.4 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 81/261 (31%), Gaps = 68/261 (26%)

Query: 12  CRVTGLSSHQVIVDPDSV-LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV-----RL 65
             +T L++  + + P+ V + +        A               W+ +YN      + 
Sbjct: 83  QAITNLTTFDIDIGPNKVTISEVHEEEWATA---------------WKKYYNPVKISEKF 127

Query: 66  TLSSDT--FEPRPETELLVD--------------SALAFSLPRIEKRDVVRILDLGTGTG 109
           T+      +EP    EL+++              + +         +    ++D+GTG+G
Sbjct: 128 TIVPTWENYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALERTVKPGDSVMDVGTGSG 187

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + +A        + + +D+   A+  A  N   N V  R    Q+D    V    DV+V
Sbjct: 188 VLSIASAMLGAE-RVLALDLDEVAVRAATLNVKLNKVQNRVTVKQNDLLKGVNEQADVMV 246

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIG 228
           +N                      ++              A+    H+   G   +  I 
Sbjct: 247 AN---------------------ILA--------EVIARFAEDAFGHVKPGGHFIASGII 277

Query: 229 YNQKVDVVRIFESRKLFLVNA 249
             +K  VV    S    +   
Sbjct: 278 RQKKDLVVDALTSAGFIIEET 298


>gi|260946067|ref|XP_002617331.1| hypothetical protein CLUG_02775 [Clavispora lusitaniae ATCC 42720]
 gi|238849185|gb|EEQ38649.1| hypothetical protein CLUG_02775 [Clavispora lusitaniae ATCC 42720]
          Length = 210

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 69/190 (36%), Gaps = 15/190 (7%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGV 125
           L+   +EP  ++ L     L         R    + ++G G+G V   L     P     
Sbjct: 10  LAETVYEPAEDSFLF----LDCFEELRPSRAFPIVCEIGAGSGVVSTFLKAHVFPDGTFF 65

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
             D++  A +   + A  N      D  Q    S++     DV+V NPPY+ +  V    
Sbjct: 66  ATDVNPAACQAVAATARLNKAD--IDPCQMSLTSALRKRTVDVLVFNPPYVPAEDVPSRP 123

Query: 185 LEVRDFDP---RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
               D  P    ++L GG DG+   + + D +   L   G   +     N+  DV R  +
Sbjct: 124 AASED--PVWLDLALLGGTDGMVVTQQVLDSLDDILAPGGAAYILFCARNRPDDVARQMK 181

Query: 241 SRKLFLVNAF 250
            +    V   
Sbjct: 182 EKGW-QVEVV 190


>gi|126173086|ref|YP_001049235.1| methyltransferase small [Shewanella baltica OS155]
 gi|217974607|ref|YP_002359358.1| type 12 methyltransferase [Shewanella baltica OS223]
 gi|262828680|sp|B8E5T2|TRMN6_SHEB2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828683|sp|A3D0V3|TRMN6_SHEB5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|125996291|gb|ABN60366.1| methyltransferase small [Shewanella baltica OS155]
 gi|217499742|gb|ACK47935.1| methyltransferase type 12 [Shewanella baltica OS223]
          Length = 238

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+G G+G + L +  +        V++   A E  + N   +  + R  
Sbjct: 29  WAQLTAAKTVLDIGAGSGLLSL-MAAQRCQAHITSVELDTSAAEACQHNFHNSPWANRLT 87

Query: 152 TLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + S           +  FD I+ NPPY E                  ++    D LS  
Sbjct: 88  LVNSSIQEFCQQIEYQEYFDHIICNPPYFEQGTQAIQSQ--------RAMARHTDSLSFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + D +   L   G  S+ +       +  I     L L+ 
Sbjct: 140 -ALLDAIHVCLAPQGNASLILPMQSMARLNEILAHSPLSLIE 180


>gi|330006958|ref|ZP_08305819.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS
           92-3]
 gi|328535616|gb|EGF62069.1| ribosomal RNA small subunit methyltransferase [Klebsiella sp. MS
           92-3]
          Length = 347

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G     N+ +      F  R      +D      L  +E     ++LD+G G G +  AL
Sbjct: 165 GEYTLDNLTIKTLPGVFS-RDG----LDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAAL 219

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
              SP  +    D+S  A+E +++    NG++   D   S+ FS V G FD+I+SNPP+ 
Sbjct: 220 ASHSPKVRLTLCDVSAPAVEASRATLAANGLAG--DVFASNVFSEVNGRFDMIISNPPFH 277

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                DG    L   + +  G  RHLN  G  
Sbjct: 278 ---------------------DGLQTSLEAAQALIRGAVRHLNSGGEL 304


>gi|315640055|ref|ZP_07895180.1| ribosomal protein L11 methyltransferase [Enterococcus italicus DSM
           15952]
 gi|315484183|gb|EFU74654.1| ribosomal protein L11 methyltransferase [Enterococcus italicus DSM
           15952]
          Length = 321

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 56/223 (25%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETE--LLVDSALAFSLPRIEK---------- 95
             W+ +Y+       + +  S ++++P  + E  +L+D  +AF                 
Sbjct: 112 TAWKKYYHPVRVTRYLTIVPSWESYQPVTDDEKVILLDPGMAFGTGTHPTTNLTLQALEV 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    +LD+GTG+G + +A  K     +    D+   A+  A+ N   N V++     
Sbjct: 172 ILRGGETVLDVGTGSGVLSIA-SKYYGAKEVHAFDLDSVAVAAAQENMDLNPVAKDVKVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D  + +    DVIV+N                      ++             +    
Sbjct: 231 VNDLLAGISIEADVIVAN---------------------ILA--------DIIVRMIPDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF--KD 252
           +R L  +G   V   I   Q   ++   ++    L   F  KD
Sbjct: 262 ARLLKPEGRFIVSGIISEKQ-PMILAEMQAHGFELTQLFTQKD 303


>gi|297529332|ref|YP_003670607.1| ribosomal protein L11 methyltransferase [Geobacillus sp. C56-T3]
 gi|297252584|gb|ADI26030.1| ribosomal protein L11 methyltransferase [Geobacillus sp. C56-T3]
          Length = 312

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 67/218 (30%), Gaps = 54/218 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+  Y+         +  + +T+EP    EL+++     +            L  +EK
Sbjct: 112 TAWKKHYHPVKVSEKFTIVPTWETYEPASSDELIIEMDPGMAFGTGTHPTTVMCLQALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    ++D+GTG+G + +A            +D+   A++ A+ N   N V       
Sbjct: 172 YVRPGDHVIDVGTGSGILSIA-AAMLGARSVRALDLDPVAVDSARLNVKLNKVQHIVTVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +E   DVIV+N                      ++                  
Sbjct: 231 QNNLLDHIEEPADVIVAN---------------------ILA--------EIILRFTGDA 261

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNA 249
            R L   G      G  Q    DV     +    +   
Sbjct: 262 YRLLKPGGRFIT-SGIIQAKKQDVKDGLLAAGFAIEEI 298


>gi|329946298|ref|ZP_08293892.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328527590|gb|EGF54585.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 549

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 78/232 (33%), Gaps = 57/232 (24%)

Query: 15  TGLSSHQVIVDPDSVLDD--RQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF 72
           TG    +V + P   +DD    R+++ + +   +   ++                     
Sbjct: 124 TGCVRARVDLRPHEAVDDAGEVRWWVASDLGELVTGRALA-------------------- 163

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
              P+  L +  A         +  V   LDLG G G   L LL+ +     V  DIS +
Sbjct: 164 ---PDHVLGIGGAGLTLAGLTPRTPVSTALDLGCGCGIQTLYLLRHAE--HVVATDISER 218

Query: 133 ALEIAKSNAVTNGVSE--------------RFDTLQSDWFSSVEG-LFDVIVSNPPYI-- 175
           AL     NA   GVS               R +         V G  FD+I SNPP++  
Sbjct: 219 ALAFTAFNAALAGVSVIDGPRPGADAGSAGRLELRLGSLLEPVAGRRFDLIASNPPFVLT 278

Query: 176 -ESVIVDCLGL-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +V    L L E RD        GG         +  G+  HL   G   +
Sbjct: 279 PPAVREAGLPLMEYRD-------AGGP----VLPALVAGLGEHLEPGGAAVM 319


>gi|281492800|ref|YP_003354780.1| methyltransferase [Lactococcus lactis subsp. lactis KF147]
 gi|281376452|gb|ADA65938.1| Methyltransferase [Lactococcus lactis subsp. lactis KF147]
 gi|326407723|gb|ADZ64794.1| methyltransferase [Lactococcus lactis subsp. lactis CV56]
          Length = 250

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 28/193 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  S + F         +D+ L    PR+ KR   +I+DL  G GAV L        
Sbjct: 19  GVKIIQSREVFSFS------IDAILLARFPRLPKRG--KIVDLCAGNGAVGL-FASSKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES 177
            + + ++I  +  ++A  +   NG+++R   +  +   +++ L     D+I  NPPY + 
Sbjct: 70  AQIIELEIQERLADMATRSIELNGLNDRMSVINDNLNRALDHLHTSSADLIFCNPPYFKV 129

Query: 178 VIVDCLGLEVRD-----FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              +    E +       +   +LD           I     + L  +G  ++     + 
Sbjct: 130 DSDESHLNESKHYTLARHELTTNLD----------EIFSVSKKLLKTNGHIAMVHRPERF 179

Query: 233 VDVVRIFESRKLF 245
           +++V    +  L 
Sbjct: 180 LEIVDKMRANNLQ 192


>gi|169830047|ref|YP_001700205.1| hypothetical protein Bsph_4631 [Lysinibacillus sphaericus C3-41]
 gi|168994535|gb|ACA42075.1| Hypothetical ybxB protein [Lysinibacillus sphaericus C3-41]
          Length = 202

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 73/210 (34%), Gaps = 54/210 (25%)

Query: 61  YNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++      +  F        + +L+D   AF +P I+      I D+G G G + L++ K
Sbjct: 28  HSFSFETDAGVFSKSEVDFGSRVLID---AFQMPNIDGA----IFDIGCGYGPIGLSIAK 80

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPPYI 175
            +P      +DI+ +A+ +++ NA  NGV        SD  S V+   +   I++NPP  
Sbjct: 81  ANPDRTVCMMDINERAVALSQKNAQVNGVQ-NVRIFVSDGLSMVDKDIEAAAILTNPPIR 139

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-- 233
                                     G        DG    L   G   V I   Q    
Sbjct: 140 A-------------------------GKETIFRFYDGAYDRLVSSGELWVVIQKKQGAPS 174

Query: 234 ------------DVVRIFESRKLFLVNAFK 251
                       DVV   + +  +++ A K
Sbjct: 175 TVSYLEGKFSEVDVVE--KKKGYWIIRAKK 202


>gi|2879819|emb|CAA41480.1| hypothetical protein [Pseudoalteromonas haloplanktis]
          Length = 232

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    +LD+GTGTG + L   + S       V+I   A   A  N   +       
Sbjct: 30  WANLSGAKSLLDIGTGTGLLALMCKQRSSELDITAVEIDESAYTQALQNVANSPWPTISI 89

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           T Q+    S E  FDV++SNPPY    +  D +                 DGLS    I 
Sbjct: 90  THQTIQSFSSEVKFDVVISNPPYFNHSLKGDNVARNTARH---------TDGLSFEELI- 139

Query: 211 DGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFL 246
               +HL+  G   S+ +   +    + +     L+L
Sbjct: 140 -NAFKHLSHRGSRFSLILPSIEGALFIELATQNGLYL 175


>gi|84515722|ref|ZP_01003083.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53]
 gi|84510164|gb|EAQ06620.1| N-6 Adenine-specific DNA methylase [Loktanella vestfoldensis SKA53]
          Length = 255

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 20/170 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL +     +PR      VD  L      I  R    +L+LG G G   L L +  
Sbjct: 14  FLGGRLQI----LQPRHGYRAGVDPVL--LAASIAARAGQSVLELGCGVGTAALCLGRRV 67

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYI 175
           P     GV++  +  ++A+ NA  N +    + + +D  +   G     FD ++ NPPY 
Sbjct: 68  PGLALTGVEVQTEYADLARRNAAANDLP--LEVITADLRTLPAGLRQRRFDHVIMNPPYF 125

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +           RD     +L GG   L+ +    D  +R L   G  ++
Sbjct: 126 DRDSGTAASDPGRD----TAL-GGDTPLADW---LDIGARRLAPKGYLTL 167


>gi|82539478|ref|XP_724124.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478663|gb|EAA15689.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 227

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 17/162 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG-----AVCLALLKESPFFKGVG 126
           + P  +T +  + AL      I   +V  +L++GTG+G        L L K         
Sbjct: 25  YLPSSDTFVFAE-ALEDDAETISS-NVNMVLEMGTGSGYLILFLYELLLKKNKRIDLLYC 82

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLG 184
           +DI+  A      NA+        + + SD F+++   G FD+I+ NPPY+E+   +   
Sbjct: 83  IDINKDACNC-VQNAINLNGISNVEIINSDLFNNLRKCGQFDIILFNPPYVETEQDEMNK 141

Query: 185 LE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + V  +       GG  G          V  HL+ +G+  +
Sbjct: 142 TDIVASY------AGGKHGREVILKFLHTVYDHLSNNGILYL 177


>gi|330470140|ref|YP_004407883.1| methyltransferase small [Verrucosispora maris AB-18-032]
 gi|328813111|gb|AEB47283.1| methyltransferase small [Verrucosispora maris AB-18-032]
          Length = 204

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 18/190 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               TL+S +            + L              +LDLG G G +   L   +P 
Sbjct: 29  GRDFTLASASGVFSATRLDPGTAVLLRKADLPPATTEGALLDLGCGFGPISCVLATVAPT 88

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIV 180
                VD++ +A E+  +NA   G+++R       D  + +   F  I SNPP       
Sbjct: 89  ATVWAVDVNERARELTAANADRLGLADRLRVAPPEDVPADL--TFAQIWSNPPIRPG--K 144

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           D L   +  + PR++ D G+  L   R +  D + R L + G             V R  
Sbjct: 145 DELHALLLRWLPRLTPD-GVAWLVVGRHLGGDSLHRWLVEQGW-----------QVQRHA 192

Query: 240 ESRKLFLVNA 249
             +   ++  
Sbjct: 193 SQKGFRVLRV 202


>gi|225378659|ref|ZP_03755880.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM
           16841]
 gi|225209496|gb|EEG91850.1| hypothetical protein ROSEINA2194_04328 [Roseburia inulinivorans DSM
           16841]
          Length = 247

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 54/141 (38%), Gaps = 17/141 (12%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + +   ++LDLGTGTG + + +  ++       ++I  ++ ++A+ +   N + ++   +
Sbjct: 44  KAKAGEKVLDLGTGTGIIPILMEAKTDAADFTALEIQEESADMARRSVAYNHLEDKIKVV 103

Query: 154 QSDWFSSVE----GLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             D   +        F VI +NPPY+              +   +   +L+         
Sbjct: 104 TGDIRDASNIFGASSFHVITTNPPYMIGTHGENSPSTAKAIARHEVLCTLN--------- 154

Query: 207 RTIADGVSRHLNKDGLCSVEI 227
             I    ++ L   G   +  
Sbjct: 155 -DILRESAKMLMPGGRFYMVH 174


>gi|314924515|gb|EFS88346.1| methyltransferase small domain protein [Propionibacterium acnes
           HL001PA1]
 gi|314967274|gb|EFT11373.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA2]
 gi|315094764|gb|EFT66740.1| methyltransferase small domain protein [Propionibacterium acnes
           HL060PA1]
 gi|315102927|gb|EFT74903.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA2]
 gi|327328612|gb|EGE70372.1| methyltransferase small domain protein [Propionibacterium acnes
           HL103PA1]
          Length = 362

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++  +  A  N ++              
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAVDSTRLTAQANQLNI-VTHWCDGLVDVP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 HESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|157377110|ref|YP_001475710.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|226713000|sp|A8G0F9|RSMC_SHESH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157319484|gb|ABV38582.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 343

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 32/144 (22%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K    R+LD G G G +  ALLK  P  K   VDI+  A+E  K    
Sbjct: 188 DEGTKLLLSHLPKMSG-RVLDFGCGAGVITAALLKAQPELKVECVDINAMAIESCKLTLA 246

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N  +   DT  SD  +  +GLF+ I+SNPP+                          DG
Sbjct: 247 ANNFTA--DTYPSDGLTQTKGLFNGIISNPPF-------------------------HDG 279

Query: 203 L----SHYRTIADGVSRHLNKDGL 222
           L       +       + L K G+
Sbjct: 280 LRSTTDIAKNFVKDSVQKLKKGGV 303


>gi|320546387|ref|ZP_08040702.1| methyltransferase [Streptococcus equinus ATCC 9812]
 gi|320448772|gb|EFW89500.1| methyltransferase [Streptococcus equinus ATCC 9812]
          Length = 253

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 21/199 (10%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           IL   +  +   +      + R      +DS L    P+I  R +  I+DL +G GAV L
Sbjct: 5   ILKEGERIDQLFSTDVKIIQNREVFSYSIDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL 62

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIV 169
                      + ++I  +  ++A+ +   N + E+   +  D  + ++ +     D+I+
Sbjct: 63  -FASTRTKAPIIEIEIQERLADMAERSIQLNDLGEQVQMINDDLKNLLKHVPRTGVDLIL 121

Query: 170 SNPPY--IESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            NPPY  +       L         +   +L            I D     L  +G  ++
Sbjct: 122 CNPPYFKVSETSKKNLSEHYLLARHEITTNL----------EEICDIARHALKSNGRLAL 171

Query: 226 EIGYNQKVDVVRIFESRKL 244
               ++ +D++ I     L
Sbjct: 172 VHRPDRFLDIIDILRQYNL 190


>gi|254519875|ref|ZP_05131931.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA]
 gi|226913624|gb|EEH98825.1| ribosomal protein L11 methyltransferase [Clostridium sp. 7_2_43FAA]
          Length = 313

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 74/219 (33%), Gaps = 56/219 (25%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       ++ +     E   + E LV                    +  +EK  +
Sbjct: 117 WKKYYKPTKVGEKIVVKPIWEEYDAQGEELVVELDPGMAFGTGTHETTRMCIQSLEKYVK 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+G G+G + +A  K       VGVD+   A+E AK N   N + E    L  +
Sbjct: 177 EDSTVFDVGCGSGILAIAAAKLGSKM-AVGVDLDPVAVESAKENVGYNNL-ENIQILYGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++G  D++V+N           +  EV                     + + V R 
Sbjct: 235 LVEVIDGKADIVVAN-----------IIAEV------------------ICILTEDVKRV 265

Query: 217 LNKDGLCS---VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           L  +G      +    ++   V +  E     ++   KD
Sbjct: 266 LKDNGYFITSGIIH--DRVDMVTKKLEETGFEVIEINKD 302


>gi|323141894|ref|ZP_08076755.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413641|gb|EFY04499.1| ribosomal protein L11 methyltransferase [Phascolarctobacterium sp.
           YIT 12067]
          Length = 311

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 57/213 (26%)

Query: 57  WRDFYNVR-------LTLSSDTFEPRP-ETELLVDSALA----------FSLPRIEK--R 96
           W+ +++V        +  S + + P+  E  + +D  +A            + R+EK   
Sbjct: 113 WKQYFHVTHVGKSLVIKPSWEEYAPKEGEHVIEIDPGMAFGTGTHHTTNMMMERLEKVIT 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+GTG+G + +A            VDI   A+ +AK N   NG+SE+ +  + D
Sbjct: 173 PDSTVFDVGTGSGILAIAAAMLGAKS-VKAVDIDGVAVRVAKENVADNGLSEQIEVREGD 231

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                EG  DVI++N                      I+             +   + + 
Sbjct: 232 LLHGTEGKADVIIAN---------------------IIA--------DIVIMLLQDIPQK 262

Query: 217 LNKDGLC----SVEIGYNQKVDVVRIFESRKLF 245
           LN +G+      +E    +  DV    +++ L+
Sbjct: 263 LNDNGVLLASGIIE---ERMPDVEAAAQAQGLY 292


>gi|78224072|ref|YP_385819.1| putative RNA methylase:methyltransferase small [Geobacter
           metallireducens GS-15]
 gi|78195327|gb|ABB33094.1| putative RNA methylase:Methyltransferase small [Geobacter
           metallireducens GS-15]
          Length = 255

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 68/196 (34%), Gaps = 24/196 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y++R+      +    +  LL   A          +   R++DLGTG+  + L L + + 
Sbjct: 13  YDLRIAQERHGYRFSLDPLLLCAFA--------APQVGARVIDLGTGSAVIPLVLARRTV 64

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYI 175
               VGV++      +A+ N   NG+ +R   L  D    +        FDV+VSNPPY 
Sbjct: 65  QATFVGVELQEGLATLAERNVALNGLVDRISILCDDVL-GLRKRFPVSSFDVVVSNPPYR 123

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
           +           RD       D   +  +            +N  G             +
Sbjct: 124 KRGTGKVSPKVGRD-------DARHESSATLADFLAAAKYLVNPTGRICFI---YHPSRL 173

Query: 236 VRIFESRKLFLVNAFK 251
             +F    +  + + +
Sbjct: 174 PELFSEAHVQKLASMR 189


>gi|255102757|ref|ZP_05331734.1| hypothetical protein CdifQCD-6_18241 [Clostridium difficile
           QCD-63q42]
          Length = 248

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 20/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRI 194
             NG+ ER + +  D         + G + V+ SNPPY  I+ +        +   + R 
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDING-YHVVTSNPPYMHIDGIKNPNDKKAISRHEVRC 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L            +     R +   G   +     + VD++ +    KL
Sbjct: 147 NL----------EDVIRAAYRLVMPRGKFFMIHRPTRLVDIITLGRKYKL 186


>gi|301058927|ref|ZP_07199896.1| methyltransferase small domain protein [delta proteobacterium
           NaphS2]
 gi|300446923|gb|EFK10719.1| methyltransferase small domain protein [delta proteobacterium
           NaphS2]
          Length = 242

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 7/122 (5%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++ +DV  ++DLGTG G + L LL   P      ++I  + +  A  NA
Sbjct: 41  IDAVLLSQFAAVQPQDV--VIDLGTGCGVIPLILLLTKPLGHVFALEIQPELVRQAWRNA 98

Query: 142 VTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISL 196
             NG+ +  D ++ D+       G  ++++ NPPY +     I       +   +   SL
Sbjct: 99  RLNGLEKMMDVVRGDFCRPPLASGSANLVICNPPYRKMKSGRINPDPQKAIARHELLGSL 158

Query: 197 DG 198
           D 
Sbjct: 159 DS 160


>gi|312278880|gb|ADQ63537.1| DNA methyltransferase signature protein [Streptococcus thermophilus
           ND03]
          Length = 254

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
              + V++  +  ++AK +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APIILVELQERLADMAKRSVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|52424258|ref|YP_087395.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
 gi|81825597|sp|Q65W50|TRMN6_MANSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|52306310|gb|AAU36810.1| SmtA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 242

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 100 RILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
           R LDLGTG+G + L L + +       GV+I   A   A  N   +  +++    Q    
Sbjct: 47  RYLDLGTGSGLIALMLAQRTQTDCHITGVEIDPSAYRQATENVRQSPWADKIQLEQQNIV 106

Query: 156 DWFSSVEGLFDVIVSNPPYIESV 178
           D+  +    FD ++SNPPY E  
Sbjct: 107 DFTRTCTKKFDTVLSNPPYFEQG 129


>gi|315038164|ref|YP_004031732.1| ribosomal protein L11 methyltransferase [Lactobacillus amylovorus
           GRL 1112]
 gi|312276297|gb|ADQ58937.1| ribosomal protein L11 methyltransferase [Lactobacillus amylovorus
           GRL 1112]
          Length = 314

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 84/264 (31%), Gaps = 68/264 (25%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +      A ++ L    +           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADKDELVKKFQAKLKELAGYGLNIGEGKITTSYIKDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR------------DVVRILD 103
                L +  +   ++P    + L+  D  LAF     +                + ++D
Sbjct: 123 DFSRHLAIVPEWEDYKPAFSDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAMIKPMSVVD 182

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+G + +A   +      +  DIS +++  AK N+  N ++      ++   + V+G
Sbjct: 183 VGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNSALNDLT-NIRVQKTSLLADVKG 240

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IV+N                      ++             +   +  HLN  G  
Sbjct: 241 KFDIIVAN---------------------ILA--------EILLDLIPQMDAHLNDGGQI 271

Query: 224 SV-EIGYNQKVDVVRIFESRKLFL 246
               I Y Q   + +  +     +
Sbjct: 272 IFSGIDYLQLPKIEKALDENGFKI 295


>gi|261820150|ref|YP_003258256.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           wasabiae WPP163]
 gi|261604163|gb|ACX86649.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium wasabiae
           WPP163]
          Length = 347

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 57  WRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           W D Y    V +      F  R      +D      L   E     ++LD+  G G +  
Sbjct: 158 WWDEYVTEGVTVKTLPGVFS-RDG----LDPGSRLLLSTFEPHMKGKVLDIACGAGVLAS 212

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L K+SP  +    D+S  A+E +K+    N +      + S+ +S ++G FDVIVSNPP
Sbjct: 213 VLAKQSPKIRLTLSDVSAAAVESSKATLAANELEGAV--IASNVYSDIDGRFDVIVSNPP 270

Query: 174 YIESVIVDCLGLE 186
           + + +       E
Sbjct: 271 FHDGLQTSLQAAE 283


>gi|144575060|gb|AAZ43715.2| putative DNA methylase [Mycoplasma synoviae 53]
          Length = 263

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 72/175 (41%), Gaps = 23/175 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +  +     L++GT  GA+ + +   S   K   ++I  KALE+A+ N 
Sbjct: 36  VDTILLGNFINLTNKTR-SALEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINV 94

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPP---YIESVIVDCLGLE--VRD 189
             N +  + + +  D+    +         +DVI  NPP   Y +  +   +  E  + +
Sbjct: 95  KLNNLENQINLIHGDFNDFYKNHCNKTLPKYDVIFCNPPFYIYEKQKVKKEITEEQLIAN 154

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++ +++L            I  G ++ + + G  S+ +   + VD+         
Sbjct: 155 YEVKLNL----------EQIIAGSAKIIQQKGELSIVLPIERLVDLFTTLRKYNF 199


>gi|71894318|ref|YP_278426.1| putative DNA methylase [Mycoplasma synoviae 53]
          Length = 258

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 72/175 (41%), Gaps = 23/175 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +  +     L++GT  GA+ + +   S   K   ++I  KALE+A+ N 
Sbjct: 31  VDTILLGNFINLTNKTR-SALEIGTNNGALSIFVASRSKKLKIDALEIQAKALELAEINV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPP---YIESVIVDCLGLE--VRD 189
             N +  + + +  D+    +         +DVI  NPP   Y +  +   +  E  + +
Sbjct: 90  KLNNLENQINLIHGDFNDFYKNHCNKTLPKYDVIFCNPPFYIYEKQKVKKEITEEQLIAN 149

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++ +++L            I  G ++ + + G  S+ +   + VD+         
Sbjct: 150 YEVKLNL----------EQIIAGSAKIIQQKGELSIVLPIERLVDLFTTLRKYNF 194


>gi|329919887|ref|ZP_08276825.1| GIY-YIG catalytic domain protein [Lactobacillus iners SPIN 1401G]
 gi|328936977|gb|EGG33407.1| GIY-YIG catalytic domain protein [Lactobacillus iners SPIN 1401G]
          Length = 344

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    A+ +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAERSVNLNQLENRIAVHCINALDAPKKLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PEGHVINPNQQKAIARHEILINL----------EQVIKVASQLLKMKGKLFIVH 173


>gi|309805484|ref|ZP_07699529.1| GIY-YIG catalytic domain protein [Lactobacillus iners LactinV
           09V1-c]
 gi|308165135|gb|EFO67373.1| GIY-YIG catalytic domain protein [Lactobacillus iners LactinV
           09V1-c]
          Length = 334

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    A+ +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAERSVNLNQLENRIAVHCINALDAPKKLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PEGHVINPNQQKAIARHEILINL----------EQVIKVASQLLKMKGKLFIVH 173


>gi|85058367|ref|YP_454069.1| 16S ribosomal RNA m2G1207 methyltransferase [Sodalis glossinidius
           str. 'morsitans']
 gi|123520122|sp|Q2NW11|RSMC_SODGM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|84778887|dbj|BAE73664.1| ribosomal RNA small subunit methyltransferase C [Sodalis
           glossinidius str. 'morsitans']
          Length = 350

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+     L   ++     + D+G GTG +   L K +   +    D    AL  +++   
Sbjct: 183 DNGSQLLLSTFDRPFQGHVADIGCGTGVLSAVLAKGAAGVQLTLSDAHAPALAASRATLA 242

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + L  D +S++ G FD+I+SNPP+                      DG    
Sbjct: 243 VNGLQG--EVLAGDVYSAISGRFDMIISNPPFH---------------------DGMQTN 279

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L    T+  G   HL   G  
Sbjct: 280 LKAAETLIRGALNHLRIGGEL 300


>gi|213691732|ref|YP_002322318.1| methyltransferase small [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213523193|gb|ACJ51940.1| methyltransferase small [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 218

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 15/107 (14%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +AL++  +N
Sbjct: 42  VDLGTSVLLKHAPEPPLAGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHAN 101

Query: 141 AVTNGVSERFDTL------------QSDWFSSVEG--LFDVIVSNPP 173
           A  NG +                  Q  +  +V G   FDVI SNPP
Sbjct: 102 AQANGRTNIHTAQVDESSTPLPAENQPAFCETVPGDLTFDVIWSNPP 148


>gi|321313704|ref|YP_004205991.1| methyltransferase [Bacillus subtilis BSn5]
 gi|320019978|gb|ADV94964.1| methyltransferase [Bacillus subtilis BSn5]
          Length = 247

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 76/208 (36%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S          +I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIIQSPTVFAFSLDAVLL-------SKFAYVPIQKGKIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G V L LL        +GV+I  +  ++A  +   N + ++ + +  D  +  E      
Sbjct: 57  GIVPL-LLSTRSKADILGVEIQERLHDMAIRSVEYNKLDDQIEIIHDDLKNMPEKLGHNR 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          +   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYQIE 190


>gi|304437471|ref|ZP_07397429.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369521|gb|EFM23188.1| SAM-dependent methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 245

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 20/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    P +  R+  R+LDLGTG G + L +   +        +I     E+A  NA
Sbjct: 32  MDAVLLAHFPTLTGRE--RVLDLGTGMGIIPLLIADHA--AIVTAAEIDPVQAELAARNA 87

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE--SVIVDCLGLEVRDFDPRIS 195
             NG++E+    + D+           +D++ +NPPY       +          +   +
Sbjct: 88  ALNGLTEKITVREGDYRDPAALFSYEAYDIVFANPPYRPVGRGALSMGARAAARHELTAT 147

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           L          R      +  L   G  ++     +  +++    +  L
Sbjct: 148 LA------DVIRA----AAFALRHGGRLAMVHLPERLSEIIPALHAAGL 186


>gi|228477190|ref|ZP_04061828.1| methyltransferase [Streptococcus salivarius SK126]
 gi|228251209|gb|EEK10380.1| methyltransferase [Streptococcus salivarius SK126]
          Length = 254

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                V++  +  ++AK +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APITLVELQERLADMAKRSVTLNQLEDQVSVVNDDLKNLLDHAPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|325956615|ref|YP_004292027.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           30SC]
 gi|325333180|gb|ADZ07088.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           30SC]
 gi|327183441|gb|AEA31888.1| ribosomal protein L11 methyltransferase [Lactobacillus amylovorus
           GRL 1118]
          Length = 314

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 84/264 (31%), Gaps = 68/264 (25%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +      A ++ L    +           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADKDELVRKFQAKLKELAGYGLNIGEGKITTSYIKDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR------------DVVRILD 103
                L +  +   ++P    + L+  D  LAF     +                + ++D
Sbjct: 123 DFSRHLAIVPEWEDYKPAFSDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAMIKPMSVVD 182

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+G + +A   +      +  DIS +++  AK N+  N ++      ++   + V+G
Sbjct: 183 VGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNSALNDLT-NIRVQKTSLLADVKG 240

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IV+N                      ++             +   +  HLN  G  
Sbjct: 241 KFDIIVAN---------------------ILA--------EILLDLIPQMDAHLNDGGQI 271

Query: 224 SV-EIGYNQKVDVVRIFESRKLFL 246
               I Y Q   + +  +     +
Sbjct: 272 IFSGIDYLQLPKIEKALDENGFKI 295


>gi|317499444|ref|ZP_07957711.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893316|gb|EFV15531.1| methyltransferase type 11 [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 244

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 12/118 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++      F    +  LL D A        + ++  R+LDLGTGTG + + +  ++  
Sbjct: 13  GYQIIQKEQGFCFGMDAVLLSDFA--------QVKNGGRVLDLGTGTGILPILMEAKTKA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYI 175
               G++I  +  ++A  +   N + ++ + ++ D   +        FD I SNPPY+
Sbjct: 65  VHLTGLEIQPEMAKMAARSVKLNHLEDKIEIVEGDIKEASAIFSHDSFDTITSNPPYM 122


>gi|258593160|emb|CBE69479.1| SAM-dependent methyltransferase [NC10 bacterium 'Dutch sediment']
          Length = 266

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 17/142 (11%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                R   R+LDLG G G +   L    P  + VG+++     + A+     NG+  R 
Sbjct: 48  QWAAPRSTDRVLDLGCGNGVIAFLLAHRHPELRIVGLEVQPALADRARRGVHLNGLQGRI 107

Query: 151 DTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLG-LEVR--DFDPRISLDGGIDGL 203
           + ++ D   +   L    FD+++ NPPY E          E+R    +    L       
Sbjct: 108 EIVEGDLRQAKGLLPIAGFDMVLCNPPYRELASGRLSPDPEIRQAKHE----LTA----- 158

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                    V   L   G   +
Sbjct: 159 -TLEEAIAAVRYLLAPKGRACL 179


>gi|15674123|ref|NP_268298.1| hypothetical protein L193121 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12725199|gb|AAK06239.1|AE006442_6 hypothetical protein L193121 [Lactococcus lactis subsp. lactis
           Il1403]
          Length = 250

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 76/193 (39%), Gaps = 28/193 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  S + F         +D+ L    PR+ KR   +I+DL  G GAV L        
Sbjct: 19  GVKIIQSREVFSFS------IDAILLARFPRLPKRG--KIVDLCAGNGAVGL-FASSKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIES 177
            + + ++I  +  ++A  +   NG+++R   +  +   +++ L     D+I  NPPY + 
Sbjct: 70  AQIIELEIQERLADMATRSIELNGLTDRMSVINDNLNRALDHLHTSSADLIFCNPPYFKV 129

Query: 178 VIVDCLGLEVRD-----FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
              +    E +       +   +LD           I     + L  +G  ++     + 
Sbjct: 130 DSDESHLNESKHYTLARHELTTNLD----------EIFSVSKKLLKTNGHIAMVHRPERF 179

Query: 233 VDVVRIFESRKLF 245
           +++V    +  L 
Sbjct: 180 LEIVDKMRANNLQ 192


>gi|251788690|ref|YP_003003411.1| methyltransferase small [Dickeya zeae Ech1591]
 gi|247537311|gb|ACT05932.1| methyltransferase small [Dickeya zeae Ech1591]
          Length = 265

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 66/182 (36%), Gaps = 19/182 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +  R+  RILD+G G+G + L L + S   F   GV++   A   A  NA  +  ++  
Sbjct: 53  WVPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCI 112

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D   +  +    + +IVSNPPY    V           +   ++ D         
Sbjct: 113 RIYPADIVGYAQTATRRYSLIVSNPPYFSPGVDCASAQRAQARYTTTLTHDA-------- 164

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNA-FKDYGGND--RVLLF 262
             + D   R L  DG   V +      D + + +       +     D       RVLL 
Sbjct: 165 --LLDCAGRLLEPDGRFCVVLPAVSAEDFLALAQRSAWRADIRVDVADSASRPVNRVLLS 222

Query: 263 CR 264
            R
Sbjct: 223 LR 224


>gi|228993055|ref|ZP_04152978.1| Ribosomal protein L11 methyltransferase [Bacillus pseudomycoides
           DSM 12442]
 gi|228766703|gb|EEM15343.1| Ribosomal protein L11 methyltransferase [Bacillus pseudomycoides
           DSM 12442]
          Length = 312

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 66/220 (30%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYIPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N         
Sbjct: 172 TVQPGNTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDGIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R + + GL      IG  +KV +    E     +    +
Sbjct: 262 ARVVKQGGLFITSGIIGAKEKV-ISEALEKAGFTIEEVLR 300


>gi|228999105|ref|ZP_04158687.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides
           Rock3-17]
 gi|229006653|ref|ZP_04164287.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides Rock1-4]
 gi|228754514|gb|EEM03925.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides Rock1-4]
 gi|228760722|gb|EEM09686.1| Ribosomal protein L11 methyltransferase [Bacillus mycoides
           Rock3-17]
          Length = 312

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 66/220 (30%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYIPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N         
Sbjct: 172 TVQPGNTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDGIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R + + GL      IG  +KV +    E     +    +
Sbjct: 262 ARVVKQGGLFITSGIIGAKEKV-ISEALEKAGFTIEEVLR 300


>gi|315644350|ref|ZP_07897490.1| methyltransferase small [Paenibacillus vortex V453]
 gi|315280227|gb|EFU43519.1| methyltransferase small [Paenibacillus vortex V453]
          Length = 255

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 26/174 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +  S + F    +  LL   A              RILD+ TG G V + LL    
Sbjct: 20  HELGIIQSEEVFSFSMDAVLLARFA--------SVPRRGRILDMCTGNGVVPI-LLSTRT 70

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
                G++I  +  ++A+ +   NG+ E+    + D     +      +D+I  NPPY+ 
Sbjct: 71  GAPIEGIEIQPRLADMARRSVTMNGLQEQITIHEGDLRELYKEKGYGAYDLITVNPPYMP 130

Query: 177 SVIVDC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               D        +   +   +L            + +  ++ L + G  S+  
Sbjct: 131 MNGSDLKLNEHQAIARHEIHCTLA----------EVIEACAKLLRQGGKMSMVH 174


>gi|152973291|ref|YP_001338437.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238892958|ref|YP_002917692.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|226712958|sp|A6THY6|RSMC_KLEP7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150958140|gb|ABR80170.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238545274|dbj|BAH61625.1| 16S ribosomal RNA m2G1207 methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 342

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G     N+ +      F  R      +D      L  +E     ++LD+G G G +  AL
Sbjct: 160 GEYTLDNLTIKTLPGVFS-RDG----LDVGSQLLLSTLEPHTKGKVLDVGCGAGVLAAAL 214

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
              SP  +    D+S  A+E +++    NG++   D   S+ FS V G FD+I+SNPP+ 
Sbjct: 215 ASHSPKVRLTLCDVSAPAVEASRATLAANGLAG--DVFASNVFSEVNGRFDMIISNPPFH 272

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                DG    L   + +  G  RHLN  G  
Sbjct: 273 ---------------------DGLQTSLEAAQALIRGAVRHLNSGGEL 299


>gi|66801729|ref|XP_629789.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4]
 gi|60463187|gb|EAL61380.1| hypothetical protein DDB_G0292048 [Dictyostelium discoideum AX4]
          Length = 257

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 15/183 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF---FKGV 125
            D +EP  ++ L +DS L      I++     +L++G+G+G V   L K          +
Sbjct: 27  KDVYEPSEDSYLFIDS-LQKDYENIKEMKPFIMLEIGSGSGFVITFLAKLLGNDGSKYYM 85

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDC 182
             DI+ KA   +   ++ N V    D L + + SS+E   G  D+++ NPPY+ +   + 
Sbjct: 86  STDINPKAAIASSKTSIENNV--HLDVLNTSFVSSIERLKGSIDILLFNPPYVPTPSEEV 143

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIFES 241
               +          GGI+G      +   +   L+K G    V +  N+   V+ I   
Sbjct: 144 NEGGIVAS-----WAGGINGREVIDKLLPQIPSILSKKGFFYIVLVQENKPKQVISILGE 198

Query: 242 RKL 244
              
Sbjct: 199 YGF 201


>gi|262831373|sp|C6CNL2|TRMN6_DICZE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 253

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 66/182 (36%), Gaps = 19/182 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +  R+  RILD+G G+G + L L + S   F   GV++   A   A  NA  +  ++  
Sbjct: 41  WVPLREETRILDIGCGSGLLGLMLAQRSGGRFPIDGVELDAAASTQAADNAAASPWADCI 100

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               +D   +  +    + +IVSNPPY    V           +   ++ D         
Sbjct: 101 RIYPADIVGYAQTATRRYSLIVSNPPYFSPGVDCASAQRAQARYTTTLTHDA-------- 152

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNA-FKDYGGND--RVLLF 262
             + D   R L  DG   V +      D + + +       +     D       RVLL 
Sbjct: 153 --LLDCAGRLLEPDGRFCVVLPAVSAEDFLALAQRSAWRADIRVDVADSASRPVNRVLLS 210

Query: 263 CR 264
            R
Sbjct: 211 LR 212


>gi|325577156|ref|ZP_08147640.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392]
 gi|325160738|gb|EGC72859.1| metallothionein SmtA [Haemophilus parainfluenzae ATCC 33392]
          Length = 232

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 20/153 (13%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  D  RILD+GTGTG V L L + S    +   +++   A + A+ N   +    R 
Sbjct: 30  WADVSDCQRILDMGTGTGLVALMLAQRSHEYCQIEAIELDPLAAQQAQENFKASPWHNRL 89

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD---GGIDGLS 204
                D   +       +D+IV+NPPY    +      E ++ +  ++       +D L 
Sbjct: 90  HLTHQDVQTYCQKTAHQYDLIVANPPYFTQGV------ECKNDERALARYVQQSHLDWL- 142

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                 +  +  L++ G  S  + Y     ++ 
Sbjct: 143 ------NWAASCLSEKGKISFVLPYEAGKTLIN 169


>gi|242399747|ref|YP_002995172.1| SAM-dependent methyltransferase, putative [Thermococcus sibiricus
           MM 739]
 gi|242266141|gb|ACS90823.1| SAM-dependent methyltransferase, putative [Thermococcus sibiricus
           MM 739]
          Length = 248

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 82/217 (37%), Gaps = 26/217 (11%)

Query: 15  TGLS-SHQVIVDPDSV--LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            GL     + + P+    LD+R R  L++   R L +++I R++     +++ +      
Sbjct: 9   LGLPVREAIKIFPELEKYLDERGRLDLSSRRARILYNKAIARVV-----FDIEVEYHPKG 63

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
               P +  +          +   R   R+L++GTG  A+   +  +      +  +I  
Sbjct: 64  LITTPISRFI--------FLKTFLRGGERVLEIGTGHTAMMAIMAAKIFKCDVIATEIDD 115

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVR 188
           +  E AK+N   N    +      +  + +      FDVI S PPY E      L     
Sbjct: 116 EFFEYAKANISANNSKVQLIKSNGEIINGIIPKREIFDVIFSAPPYYEKPTKGVLT---- 171

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              P   + GG+ G      I      ++ ++G  ++
Sbjct: 172 ---PIEGIGGGVYGEEFAVRILREAREYMTENGKVAL 205


>gi|164688849|ref|ZP_02212877.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM
           16795]
 gi|164602053|gb|EDQ95518.1| hypothetical protein CLOBAR_02497 [Clostridium bartlettii DSM
           16795]
          Length = 249

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 74/183 (40%), Gaps = 24/183 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L      F    +  LL + A        + ++  +++DLGTGTG + + +  +S  
Sbjct: 18  GLKLIQDKTGFCFGIDAVLLANFA--------KVKNNAKVVDLGTGTGIIPILIAGKSKA 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            K +GV+I  +  E+A  +   N + +R + + +D  +  + L    + V  SNPPY+  
Sbjct: 70  SKIIGVEIQEEVYEMATRSVKLNDLEDRVEIINADIKTIDKELEVHGYHVATSNPPYMHM 129

Query: 178 VIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
             +        +   +   +L            +    SR +   G   +     + VD+
Sbjct: 130 DGIKNPNDKKAISRHEIMCNL----------EDVIRAASRLVMPRGKFFMIHRPTRLVDI 179

Query: 236 VRI 238
           + +
Sbjct: 180 IEL 182


>gi|284922525|emb|CBG35612.1| putative DNA-binding protein [Escherichia coli 042]
          Length = 245

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELENEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 QSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|315104022|gb|EFT75998.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA2]
          Length = 206

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 30/165 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                   LDLG G G +  AL +       V VD++  A+++   NA    V +R    
Sbjct: 63  PPPSNGTFLDLGCGYGPIACALARACSGSHIVAVDVNDLAIDLTTRNAKALRVGDRVHAC 122

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + +     +  FD I S PP            +    +   +             ++D  
Sbjct: 123 RPEEVDP-DLRFDEIWSTPP--------IRVGKAALHEILTTWLA---------RLSDEG 164

Query: 214 SRHLNKDGLC--------SVEIGYNQKVDVVRIFESRKLFLVNAF 250
             HL                E    Q  D  R+  ++   +++  
Sbjct: 165 VAHLVVGKNLGADSLTSWLCE----QGFDAARVASAKGFRVIDVH 205


>gi|255974679|ref|ZP_05425265.1| methyltransferase [Enterococcus faecalis T2]
 gi|256964102|ref|ZP_05568273.1| methyltransferase small [Enterococcus faecalis HIP11704]
 gi|307274139|ref|ZP_07555347.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0855]
 gi|307278573|ref|ZP_07559644.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0860]
 gi|255967551|gb|EET98173.1| methyltransferase [Enterococcus faecalis T2]
 gi|256954598|gb|EEU71230.1| methyltransferase small [Enterococcus faecalis HIP11704]
 gi|306504739|gb|EFM73938.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0860]
 gi|306509101|gb|EFM78163.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0855]
          Length = 202

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNEKTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|118444755|ref|YP_878564.1| ribosomal protein L11 methyltransferase [Clostridium novyi NT]
 gi|166223410|sp|A0Q1R2|PRMA_CLONN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|118135211|gb|ABK62255.1| ribosomal protein L11 methyltransferase [Clostridium novyi NT]
          Length = 312

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 25/154 (16%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEK--------------R 96
           W+ +Y      +    +P  E        ++++     +                     
Sbjct: 117 WKKYYKPTKIGNEIVVKPTWEDYNKKDNEIVIELDPGMAFGTGTHETTRLCVKALEEYVN 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +     VGVD+   A++ AK N   N + +  + L  +
Sbjct: 177 EDSVVFDIGTGSGILSIAAAKLNAK-HVVGVDLDPVAVDAAKENVELNNL-DNIEILYGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
               V+G  +++V+N   I + I+  L  +V+ F
Sbjct: 235 LMEVVDGKANIVVAN---ILADIIKILAEDVKKF 265


>gi|299541918|ref|ZP_07052241.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1]
 gi|298725656|gb|EFI66297.1| hypothetical protein BFZC1_23249 [Lysinibacillus fusiformis ZC1]
          Length = 200

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 70/212 (33%), Gaps = 49/212 (23%)

Query: 61  YNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115
            +    L   TF    +  +     VD      +   +  D+   I D+G G G + L++
Sbjct: 17  RHWTFKLLGHTFSFETDAGVFSKSEVDFGSRVLIDAFQMPDIDGAIFDVGCGYGPIGLSI 76

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPP 173
            K +P      +DI+ +A+ +++ NA  NGV        SD  S V+   D   I++NPP
Sbjct: 77  AKTNPDRTVFMMDINERAVALSQKNAQVNGVQ-NVRIFVSDGLSMVDNDVDAAAILTNPP 135

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G        DG    L   G   V I   Q  
Sbjct: 136 IRA-------------------------GKETIFRFYDGAYDRLVSSGELWVVIQKKQGA 170

Query: 234 --------------DVVRIFESRKLFLVNAFK 251
                         DVV   + +  ++V A K
Sbjct: 171 PSTVSYLEEKFSEVDVVE--KKKGYWIVRAKK 200


>gi|153825680|ref|ZP_01978347.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740617|gb|EDM54726.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 340

 Score = 74.0 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+    LT+ S           L    L  +LP +      +++D+G G G +   + K 
Sbjct: 166 DYQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSG----KVIDIGCGAGVLGCVMAKL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   +
Sbjct: 222 NPHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E                      +      HL   G   V
Sbjct: 280 ETSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|312372354|gb|EFR20335.1| hypothetical protein AND_20276 [Anopheles darlingi]
          Length = 735

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 13/119 (10%)

Query: 38  LTNAIVRSLKHE---SIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSAL-AFS 89
               I +  + +    I  + G      +   ++  +S   F    +   L    L   +
Sbjct: 347 YFEVIQKRQQGQYTNPIEHLYGETHIDDEILGLKFRISPQAFF---QINTLAAGVLYQCA 403

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +      +   +LD+  GTG + L   +     + +GVDI  +A+E AK NA  NG+  
Sbjct: 404 IDLAAPDNNTSVLDICCGTGTIGLCFARHCK--QVLGVDIVPQAIEDAKYNAERNGIEN 460


>gi|319953443|ref|YP_004164710.1| tRNA (adenine-n(6)-)-methyltransferase [Cellulophaga algicola DSM
           14237]
 gi|319422103|gb|ADV49212.1| tRNA (adenine-N(6)-)-methyltransferase [Cellulophaga algicola DSM
           14237]
          Length = 243

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 61/169 (36%), Gaps = 35/169 (20%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K     ILD+G GTG + L L + S       +++   A E    N   +   +R     
Sbjct: 34  KDTSYSILDIGAGTGVISLMLAQRSYAENIEAIELDGDAFEQCTENFEASEWGDRLFCFH 93

Query: 155 SDWFSSVE----------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + +   V+           L+DVIVSNPP+    +                   G D   
Sbjct: 94  AGFDEFVDEYTEEDPEEAELYDVIVSNPPFYSEEVS-----------------SGDDARD 136

Query: 205 HYRT--------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
             R         +  GVS+ L+  G+ +  I Y ++ + + +     LF
Sbjct: 137 QARQNSSLPFDELVSGVSKLLSPKGIFATIIPYKEEENFIALAAQNNLF 185


>gi|91794327|ref|YP_563978.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans
           OS217]
 gi|123060654|sp|Q12JX1|RSMC_SHEDO RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|91716329|gb|ABE56255.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella denitrificans
           OS217]
          Length = 345

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            + + +       +   L    L   LP++E     R+LD G G G + +ALLK  P  +
Sbjct: 175 EIIICNLVGVFSEKHLDLGTELLLSHLPKLEG----RVLDFGCGAGVITVALLKAMPKLE 230

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              +DI+  AL   +     N +  +     SD  + V G FD I+SNPP+ +
Sbjct: 231 LECIDINAMALASCELTLQANKLQAKV--YPSDGLTQVTGAFDAIISNPPFHD 281


>gi|312115804|ref|YP_004013400.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
 gi|311220933|gb|ADP72301.1| methyltransferase small [Rhodomicrobium vannielii ATCC 17100]
          Length = 307

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 77/229 (33%), Gaps = 27/229 (11%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRI----------LGWRDFYNV 63
           V G +SH  +    +      R     +  R     ++H +                   
Sbjct: 4   VLGQASHNPVAAGGASPSALDRRARPQSGFRKALRSTLHYLSYHFVLNHEGTQRAKAAGF 63

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L +    F PR           A  +  ++ R  V + D+GTG+G + LA  +    F 
Sbjct: 64  MLEVPPTVFHPRYFISS---ETFAHFIDGLDLRGKV-VADIGTGSGILALAAARAGADF- 118

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVD 181
            + +DI+  A + A  NA TNG       L S+   ++     FDVI S+PP       D
Sbjct: 119 VLALDINPNAADAAVQNAETNGYGPNVKGLCSNLMDAIPARPIFDVIFSSPPKHAGKTRD 178

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                            G D L+  R +       L  DG   + I  +
Sbjct: 179 LADA---------GWHSGPDNLN-LRGLFQQARARLKPDGRMYLMISSD 217


>gi|307544298|ref|YP_003896777.1| 16S ribosomal RNA methyltransferase [Halomonas elongata DSM 2581]
 gi|307216322|emb|CBV41592.1| 16S ribosomal RNA m2G1207 methyltransferase [Halomonas elongata DSM
           2581]
          Length = 329

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   +LD+G G G +   L +          D++  A+E  +    TNG+    +   S
Sbjct: 188 PNQGSVLDMGCGDGIIAAWLARR--GLAVTAADVNGFAVEATRRTLATNGLEG--EVFHS 243

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D ++ +    FD IVSNPP+ +   VD                 G  G      +  G  
Sbjct: 244 DVYAGLPQTRFDAIVSNPPFHQERAVDY----------------GPAG-----RLIAGAP 282

Query: 215 RHLNKDGLCSV 225
             L   G   +
Sbjct: 283 ERLEPGGQLVM 293


>gi|146312703|ref|YP_001177777.1| methyltransferase small [Enterobacter sp. 638]
 gi|262828272|sp|A4WDE6|TRMN6_ENT38 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|145319579|gb|ABP61726.1| methyltransferase small [Enterobacter sp. 638]
          Length = 245

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+G+G+G + L L + +        V++  +A   A  NA  +  +ER 
Sbjct: 39  WAPVAGVKRILDIGSGSGLLALMLAQRTEQHVTIDSVELDAQAANQASENAAESPWAERV 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               +D   W       +D+IVSNPPY E  +           +   +   G  G   + 
Sbjct: 99  QVQCADILAWAPEQTARYDLIVSNPPYYEPGVDCGTP------EREQARYTGSLG---HP 149

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLLF 262
            +    +  ++++G   V +  N     ++       FL     D    D     RVLL 
Sbjct: 150 ALLAAAANLISEEGFFCVVLPENTGNTFIKTALDIGWFL-RLRTDIADTDGKLPHRVLLA 208


>gi|299755383|ref|XP_001828626.2| methylase [Coprinopsis cinerea okayama7#130]
 gi|298411201|gb|EAU93229.2| methylase [Coprinopsis cinerea okayama7#130]
          Length = 227

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 8/149 (5%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            +EP  +T LL+D AL      ++  + +  L++G+G+G V   L K       +  DI+
Sbjct: 18  VYEPAEDTFLLLD-ALEADEQALKAANPLVCLEVGSGSGCVSAFLTKIIDPALYICTDIN 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIESVIVDCLGLE 186
             A   +++    N      D L   +   +        DVI+ NPPY+ +   +    +
Sbjct: 77  PHACRASQATGRNNKAE--LDVLNGPFAHPLHQRLKNSIDVIMFNPPYVPTSFEEAQYAQ 134

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                   +  GG+DG+    T    V  
Sbjct: 135 STHHL-EGAWAGGLDGMQVTNTFLSQVKA 162


>gi|113474212|ref|YP_720273.1| methyltransferase small [Trichodesmium erythraeum IMS101]
 gi|123352776|sp|Q119M4|TRMN6_TRIEI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110165260|gb|ABG49800.1| methyltransferase small [Trichodesmium erythraeum IMS101]
          Length = 239

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 56/167 (33%), Gaps = 30/167 (17%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI-------AKSNAVTN 144
            ++     +ILD+GTGTG + L L + S   K         A+EI       A+ N   +
Sbjct: 32  WVDVSGAEKILDIGTGTGLIALMLAQRSSQLKVDI-----DAVEIDINSSIQARENVERS 86

Query: 145 GVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVD-CLGLEVRDFDPRISLDGGI 200
             S+R           ++     +D+IVSNPP+ E+          V             
Sbjct: 87  RWSDRVKVENYSIQKYIDICQKRYDLIVSNPPFFENASKPVKKARTVARH---------- 136

Query: 201 DGLSHY--RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                     +     + L+  G  +V     Q  +     E   LF
Sbjct: 137 --TDFLSQADLLQAAVKLLSDTGKLAVIYPVEQAHNFQEKAEYLGLF 181


>gi|163942068|ref|YP_001646952.1| ribosomal protein L11 methyltransferase [Bacillus
           weihenstephanensis KBAB4]
 gi|229135137|ref|ZP_04263938.1| Ribosomal protein L11 methyltransferase [Bacillus cereus
           BDRD-ST196]
 gi|163864265|gb|ABY45324.1| ribosomal protein L11 methyltransferase [Bacillus
           weihenstephanensis KBAB4]
 gi|228648314|gb|EEL04348.1| Ribosomal protein L11 methyltransferase [Bacillus cereus
           BDRD-ST196]
          Length = 312

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+        T+      + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPNEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +  +  
Sbjct: 172 TVQPGDTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDDIVNVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      IG  +K+ + +  E+    +    +
Sbjct: 262 ARVVKPGGLFITSGIIGAKEKI-ISKALETAGFSIEEVLR 300


>gi|332520063|ref|ZP_08396527.1| methyltransferase small [Lacinutrix algicola 5H-3-7-4]
 gi|332044622|gb|EGI80816.1| methyltransferase small [Lacinutrix algicola 5H-3-7-4]
          Length = 237

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 64/165 (38%), Gaps = 13/165 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  L  +   + K+ +   LD+G GTG + L L + S       ++I   A E    N  
Sbjct: 24  DGVLLGAWATLTKQPLAT-LDIGAGTGVLSLMLAQRSHAEVIDALEIDESAYEQCVENFE 82

Query: 143 TNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +  S+R     +D       +E  +D+I+ NPP+             RD      L   
Sbjct: 83  ASPWSDRLFCYHADLAEFTEEIEDKYDLIICNPPFYSEDYKTENTQ--RD------LARF 134

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            D +     + D VS+ L +DG     I + ++   + +  +  L
Sbjct: 135 QDAMPF-EHLVDSVSKLLMEDGTFCTVIPFKEEDKFIDLASAVNL 178


>gi|134300333|ref|YP_001113829.1| 50S ribosomal protein L11 methyltransferase [Desulfotomaculum
           reducens MI-1]
 gi|172044330|sp|A4J7F1|PRMA_DESRM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|134053033|gb|ABO51004.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfotomaculum reducens MI-1]
          Length = 308

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 72/248 (29%), Gaps = 67/248 (27%)

Query: 41  AIVRSLKHESIHRI--------------LGWRDFY-----NVRLTLSSDTFEPRPETELL 81
            +   L    +  +                W  +Y       +L +     +  PE   +
Sbjct: 80  LLQERLTGLPLDAVPTFERRQVAEEDWATAWMKYYKPVEIGQKLAVKPSWEDYVPEDGRI 139

Query: 82  VDSALAFSLPRIEKRDVVR---------------ILDLGTGTGAVCLALLKESPFFKGVG 126
           V                                 + D+GTGTG + +   K     + + 
Sbjct: 140 VLEMDPGMAFGCGNHPTTTMCMEYLEGIIQGGESVADVGTGTGILAITSAK-LGAARVLA 198

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           VD+   A+++++ N   NGV +  +    +    VE   DV+++N   I + ++  L  +
Sbjct: 199 VDLDEVAVKVSQENVERNGVQDIVEVFHGNLLDKVESKVDVVIAN---IVANVIMILAPD 255

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ--KVDVVRIFESRKL 244
           V                           R L   G      G  Q    +V +  E    
Sbjct: 256 V--------------------------PRILKHGGYFIT-SGIIQFRAEEVRQKLEQTGF 288

Query: 245 FLVNAFKD 252
            ++   +D
Sbjct: 289 KILGRKED 296


>gi|150019695|ref|YP_001311949.1| methyltransferase small [Clostridium beijerinckii NCIMB 8052]
 gi|149906160|gb|ABR36993.1| methyltransferase small [Clostridium beijerinckii NCIMB 8052]
          Length = 249

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 22/165 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      I+ +   +++DL TGTG +   +  +    +  G++I    +++AK + 
Sbjct: 35  IDAVLLSDFAYIKNKH--KVMDLCTGTGIIPFLIYGKYKPERVYGLEIQEDMVDMAKRSV 92

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N +      +  D     +      FD +  NPPY      +I     L +   +   
Sbjct: 93  KLNELEGNVCFINEDLKNIDYLKTLDKFDAVTVNPPYKLNNSGIINPNDKLAIARHEILC 152

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
           +L            +       L  +G   +     +   +  IF
Sbjct: 153 NL----------EDVISAARILLKDNGRLFMIH---RPERLADIF 184


>gi|305681483|ref|ZP_07404290.1| methyltransferase small domain protein [Corynebacterium matruchotii
           ATCC 14266]
 gi|305659688|gb|EFM49188.1| methyltransferase small domain protein [Corynebacterium matruchotii
           ATCC 14266]
          Length = 530

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 19/189 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P  +  + V +A    L    +  V   LDLG G+G    AL +     +    D+  
Sbjct: 150 YAPGRDHVVGVGAASLSLLRMTCRTPVDSALDLGAGSGVQ--ALAQLGCASQVTLTDVHP 207

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +AL++A++     G   + + L+  WF  V G  FD IV+NPP++  V    +G   R  
Sbjct: 208 RALDMAEATLAAAGALPQAELLEGSWFEPVAGRTFDRIVANPPFV--VGPPDIGHVYR-- 263

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----I--GYNQKVDVVRIFESRKL 244
                 D G+D     + +      HL + G+  +        G + +  +        +
Sbjct: 264 ------DSGLDLDGATQLVVATAPEHLTEGGVAQLLGAWAHVRGEDWRSRIAEWLPDHGV 317

Query: 245 FLVNAFKDY 253
                 +D 
Sbjct: 318 RAWVLQRDM 326


>gi|82545028|ref|YP_408975.1| enzyme [Shigella boydii Sb227]
 gi|81246439|gb|ABB67147.1| putative enzyme [Shigella boydii Sb227]
          Length = 285

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|15612610|ref|NP_240913.1| hypothetical protein BH0047 [Bacillus halodurans C-125]
 gi|10172659|dbj|BAB03766.1| BH0047 [Bacillus halodurans C-125]
          Length = 246

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 16/145 (11%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              ++  S + F    +  LL                   ILDL TG G V L LL E  
Sbjct: 16  RTRQVIQSPNVFAFSMDAVLLARFVYLPI-------QKGDILDLCTGNGIVPL-LLTERS 67

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE 176
             + VGV+I  +  E+A  N+  N + ++   +  D     + +    FDV+  NPPY  
Sbjct: 68  KARMVGVEIQERLFEMAIRNSQLNDLEQQLTFMNLDLKDLPKNMPMHSFDVVTCNPPYFA 127

Query: 177 SVIVDCLGLE----VRDFDPRISLD 197
           ++  D L       +   +   SLD
Sbjct: 128 NLNEDLLNDNPYLAIARHEIHCSLD 152


>gi|320457825|dbj|BAJ68446.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 187

 Score = 73.6 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 15/107 (14%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +AL++  +N
Sbjct: 11  VDLGTSVLLKHAPEPPLAGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHAN 70

Query: 141 AVTNGVSERFDTL------------QSDWFSSVEG--LFDVIVSNPP 173
           A  NG +                  Q  +  +V G   FDVI SNPP
Sbjct: 71  AQANGRTNIHTAQVDESSTPLPAENQPAFCETVPGDLTFDVIWSNPP 117


>gi|282854830|ref|ZP_06264164.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
 gi|282581976|gb|EFB87359.1| methyltransferase small domain protein [Propionibacterium acnes
           J139]
          Length = 334

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++  +  A  N ++              
Sbjct: 197 VDLGCGNGVISAHLARLLPQATIHATDVSWQAVDSTRLTAQANQLNI-VTHWCDGLVDVP 255

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 256 HESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 294

Query: 222 LCSV 225
               
Sbjct: 295 TLWC 298


>gi|308235827|ref|ZP_07666564.1| methyltransferase small domain protein [Gardnerella vaginalis ATCC
           14018]
 gi|311114409|ref|YP_003985630.1| putative 16S rRNA methyltransferase [Gardnerella vaginalis ATCC
           14019]
 gi|310945903|gb|ADP38607.1| possible 16S rRNA methyltransferase [Gardnerella vaginalis ATCC
           14019]
          Length = 233

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 13/160 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +  R  D+G G GA+ LAL  ESP  +   VD++ +AL++   NA   G++     L
Sbjct: 84  QPPENGRFFDIGCGWGAISLALGFESPNAQIYAVDVNERALDLTDINAKNAGLNNIHTYL 143

Query: 154 QSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-AD 211
             D          D+I SNPP    V  D L   +  + PR+   GG   L   + + +D
Sbjct: 144 VEDALKEDALKDIDLIWSNPPI--RVGKDVLHNILITWLPRLK-VGGAAYLVVQKNLGSD 200

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            +   L+K       +G +    V +   S+   ++   +
Sbjct: 201 SLITWLSKT------LGEDF--SVEKYASSKGYRIIEVLR 232


>gi|171778645|ref|ZP_02919741.1| hypothetical protein STRINF_00593 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282602|gb|EDT48026.1| hypothetical protein STRINF_00593 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 253

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P+I  R +  I+DL +G GA+ L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAIGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY--I 175
              + V++  +   +A+ +   N +  +   +  D  + +  +     D+I+ NPPY  +
Sbjct: 70  APIIEVELQERLANMAERSIQLNQLENQVQMINDDLKNLLNHVPRSGVDLILCNPPYFKV 129

Query: 176 ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I +     L  +G  ++    ++ +
Sbjct: 130 SETSKKNLSEHYLLARHEIATNL----------EEICEVARHALKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRHYNL 190


>gi|294619483|ref|ZP_06698926.1| methyltransferase [Enterococcus faecium E1679]
 gi|291594279|gb|EFF25710.1| methyltransferase [Enterococcus faecium E1679]
          Length = 244

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 78/189 (41%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSKVFSFS------LDAVLLAHFSRVPKKG--KIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N ++E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLNEQMTVHTIDLKDSLSVVRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++    ++ +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDISSKLLKTNGRFTMVHRPDRFL 175

Query: 234 DVVRIFESR 242
           +++++ E  
Sbjct: 176 EIIQVMEDY 184


>gi|50285219|ref|XP_445038.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524341|emb|CAG57938.1| unnamed protein product [Candida glabrata]
          Length = 223

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGV 125
              +EP  ++ LL+D  L      +  R    +  + ++G G+G V   +++ +    G 
Sbjct: 12  EKVYEPSEDSFLLLD-ILEKERQYLADRFSKSLNVVCEIGVGSGIVTTFMMQNTIPSAGH 70

Query: 126 -----GVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
                 +D++  ALE   + A  N   +   + +Q+D  SS      D+++ NPPY+ + 
Sbjct: 71  LNLYYAIDVNPWALESTLTTADINNCKKSYLEPVQADLTSSFRTREIDLLIFNPPYVPAE 130

Query: 179 IVDCLGLEVRDFDPR--ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  +  E  D D    ++L GG DG+     + D +   L+  G+  +
Sbjct: 131 DVPTIPEETDDQDKWLDLALLGGEDGMDVTNKVLDNLEAILSLRGVAYI 179


>gi|261402360|ref|YP_003246584.1| protein of unknown function DUF890 [Methanocaldococcus vulcanius
           M7]
 gi|261369353|gb|ACX72102.1| protein of unknown function DUF890 [Methanocaldococcus vulcanius
           M7]
          Length = 261

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 14/177 (7%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +  +N+ +        P P    L   +   +L  +  +  + +L++GTG  A+   L+K
Sbjct: 46  KVLFNLDVEFHDKGLIPTPINRYLFIKSTFKTLENLNIKKPL-VLEIGTGHSAIISLLIK 104

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
           +    +    ++  + + +AKSN   N ++ +    +    S +    +  FD+I+S PP
Sbjct: 105 KLYNAEVYATEVDEEFINLAKSNIKRNNLNIKIINSKGKIISGIDEIKDKKFDLIISYPP 164

Query: 174 YIESVIVDCLGLEVRDFDPRIS-----LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     V       R F   ++     + GG  G +    I +     LNK G+ S+
Sbjct: 165 FYSDNSVASG----RKFGGALAKNVELIGGGKFGETFSFKIIEEGVNFLNKKGVISL 217


>gi|91095139|ref|XP_973052.1| PREDICTED: similar to methyltransferase 10 domain containing
           [Tribolium castaneum]
 gi|270015731|gb|EFA12179.1| hypothetical protein TcasGA2_TC002332 [Tribolium castaneum]
          Length = 483

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 15/157 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            +DF ++ + +      P     L     L   L         R +D+GTG   +   L 
Sbjct: 60  KKDF-DLNIEIPPGKLIPTIPLRLNYILWLEDLLNLAGGPPQARGIDIGTGASCIYPLLA 118

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-------LQSDWFSSVEGLFDVIV 169
                +  V  +I  ++L+ A +N   N +             L +       G FD  +
Sbjct: 119 ARKSQWSMVATEIDPESLKCATANVANNHLEGLVTVMGAQKDSLLAQVLEKFPGDFDFCM 178

Query: 170 SNPPYIESVIVDCLGL-----EVRDFDPRISLDGGID 201
            NPP+  + +   L       +V+   P+ +    +D
Sbjct: 179 CNPPFFSTPL--ELHPFFKARKVKRPHPKNAFCASVD 213


>gi|315127596|ref|YP_004069599.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913]
 gi|315016110|gb|ADT69448.1| hypothetical protein PSM_A2534 [Pseudoalteromonas sp. SM9913]
          Length = 232

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +      +LD+GTGTG + L   + +P  K   V++   A + A  N   +   +   
Sbjct: 30  WADLSHANTLLDIGTGTGLLALMCKQRAPHLKVSAVEVDETAYQQALQNCQQSPWRDISI 89

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             Q        GLFD +++NPPY    +  D                   DGLS    + 
Sbjct: 90  YHQPIQQFEAVGLFDCVIANPPYFNHSLKGDNAARNTARH---------TDGLSFAELL- 139

Query: 211 DGVSRHLN-KDGLCSVEIGYNQKVDVVRIFESRKLFL 246
            G  RHL+ +D   ++ +   +    + + + + L+L
Sbjct: 140 -GAFRHLSHQDSRFNLILPTTEAQLFITLAQQQGLYL 175


>gi|296329535|ref|ZP_06872021.1| methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305672732|ref|YP_003864403.1| O-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296153278|gb|EFG94141.1| methyltransferase [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305410975|gb|ADM36093.1| O-methyltransferase [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 247

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S          +I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIIQSPTVFAFSLDAVLL-------SKFAYVPIQKGKIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G V L LL        +GV+I  +  ++A  +   N + ++   +  D  +  E      
Sbjct: 57  GIVPL-LLSTRSKADILGVEIQERLHDMAVRSVEYNKLQDQIQIIHDDLKNMPEKLGHNR 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          +   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYQIE 190


>gi|257126532|ref|YP_003164646.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
 gi|257050471|gb|ACV39655.1| methyltransferase small [Leptotrichia buccalis C-1013-b]
          Length = 242

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   +ILD+GTG G + L L + S   +  G+++     EI   N   N    +   + 
Sbjct: 40  NRKTKKILDIGTGCGIIALLLAQRS-KAQITGIELQETMAEITIRNINGNKFENQVKIIN 98

Query: 155 SDW--FSSVEGL--FDVIVSNPPYIE 176
            D   + ++     FD IV+NPPY E
Sbjct: 99  EDIKNYKNIFNRDEFDTIVTNPPYFE 124


>gi|296454450|ref|YP_003661593.1| methyltransferase small [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183881|gb|ADH00763.1| methyltransferase small [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 218

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 15/107 (14%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +AL++  +N
Sbjct: 42  VDLGTSVLLKHAPEPPLTGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHAN 101

Query: 141 AVTNGVSERFDTL------------QSDWFSSVEG--LFDVIVSNPP 173
           A  NG +                  Q  +  +V G   FD I SNPP
Sbjct: 102 AQANGRTNIHTAQVDESSTPLPAENQPAFCETVPGDLTFDAIWSNPP 148


>gi|260431563|ref|ZP_05785534.1| methyltransferase small [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415391|gb|EEX08650.1| methyltransferase small [Silicibacter lacuscaerulensis ITI-1157]
          Length = 257

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 16/167 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   RL L    ++PR      VD  L      +       +L+LG G GA  L L   
Sbjct: 13  DFLGGRLRL----WQPRDGYRAGVDPVL--LAAAVPASPGQSVLELGCGAGAAVLCLGIR 66

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE 176
            P     GV++     ++A+ NA  N ++                +  FD +++NPPY  
Sbjct: 67  VPDLHLTGVELQPAYADLARRNARENRIALSVHAADLAHLPPDLRQAQFDHVIANPPYYR 126

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +          R    RI+L G    L+ +    +  +R L   G  
Sbjct: 127 AGAHSAAADAGR----RIAL-GEQTPLAAW---VEVAARRLAPRGYL 165


>gi|229916344|ref|YP_002884990.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b]
 gi|259534532|sp|C4L423|PRMA_EXISA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|229467773|gb|ACQ69545.1| ribosomal protein L11 methyltransferase [Exiguobacterium sp. AT1b]
          Length = 312

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 53/216 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETE-LLVDSALAFSLPRIEK------------R 96
           W+ +Y        + +    + + P+PE   +L+D  +AF                   R
Sbjct: 115 WKQYYKPVKISQQLTIVPLWEEYTPQPEENVILLDPGMAFGTGTHPTTMLCIQAIENYIR 174

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D+GTG+G + +A  K         +D+   A+E A+ N  TNGV E       D
Sbjct: 175 EGDHVIDVGTGSGVLSIAAAK-LGAASVKALDLDSVAVESARQNVETNGVGELVQVDTGD 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               VEG +D++V+N                      ++               +     
Sbjct: 234 LLKGVEGEYDLVVAN---------------------ILA--------DVILLFIEDAYAR 264

Query: 217 LNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
               G       IG  +   V     +    +    
Sbjct: 265 TKSGGRFITSGIIGEKRAE-VTNALVAAGFEIEETR 299


>gi|291547630|emb|CBL20738.1| Predicted O-methyltransferase [Ruminococcus sp. SR1/5]
          Length = 246

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 62/153 (40%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R+++ +V   LD+GTGTG + + L   +      G++I  +  E+A  + 
Sbjct: 32  MDAVLLSGFARVKRGEVA--LDMGTGTGIIPILLSDRTDGEHFTGLEIQHECAEMADRSV 89

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             NG+ +R   ++ D   +        FDV+  NPPY+     +    L   +   +   
Sbjct: 90  RYNGLEDRVRIVEGDIREAAGIFGAASFDVVTCNPPYMIGQHGLTNPHLPKAIARHEILC 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           S D           +A   +R L   G   +  
Sbjct: 150 SFD----------DVACQAARVLKDRGRFFLVH 172


>gi|194432131|ref|ZP_03064420.1| putative methyltransferase [Shigella dysenteriae 1012]
 gi|194419660|gb|EDX35740.1| putative methyltransferase [Shigella dysenteriae 1012]
          Length = 285

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIES-VIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWLTQQTVRFDLIISNPPYYQQGAECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|187731581|ref|YP_001881356.1| putative methyltransferase [Shigella boydii CDC 3083-94]
 gi|262828745|sp|B2TYI8|TRMN6_SHIB3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831193|sp|Q31XR1|TRMN6_SHIBS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|187428573|gb|ACD07847.1| putative methyltransferase [Shigella boydii CDC 3083-94]
 gi|320175855|gb|EFW50936.1| putative methyltransferase [Shigella dysenteriae CDC 74-1112]
 gi|320186376|gb|EFW61110.1| putative methyltransferase [Shigella flexneri CDC 796-83]
          Length = 245

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|69247674|ref|ZP_00604450.1| conserved hypothetical protein [Enterococcus faecium DO]
 gi|257880305|ref|ZP_05659958.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257882160|ref|ZP_05661813.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257890964|ref|ZP_05670617.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257894219|ref|ZP_05673872.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|258614747|ref|ZP_05712517.1| hypothetical protein EfaeD_03462 [Enterococcus faecium DO]
 gi|260562391|ref|ZP_05832905.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|293559941|ref|ZP_06676451.1| methyltransferase [Enterococcus faecium E1162]
 gi|293568354|ref|ZP_06679677.1| methyltransferase [Enterococcus faecium E1071]
 gi|294621014|ref|ZP_06700210.1| methyltransferase [Enterococcus faecium U0317]
 gi|314937681|ref|ZP_07845006.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|314940923|ref|ZP_07847829.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|314948056|ref|ZP_07851458.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
 gi|314952335|ref|ZP_07855345.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|314991941|ref|ZP_07857396.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|314995199|ref|ZP_07860313.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|68194746|gb|EAN09226.1| conserved hypothetical protein [Enterococcus faecium DO]
 gi|257814533|gb|EEV43291.1| conserved hypothetical protein [Enterococcus faecium 1,230,933]
 gi|257817818|gb|EEV45146.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|257827324|gb|EEV53950.1| conserved hypothetical protein [Enterococcus faecium 1,231,410]
 gi|257830598|gb|EEV57205.1| conserved hypothetical protein [Enterococcus faecium 1,231,408]
 gi|260073315|gb|EEW61656.1| conserved hypothetical protein [Enterococcus faecium C68]
 gi|291588963|gb|EFF20788.1| methyltransferase [Enterococcus faecium E1071]
 gi|291599414|gb|EFF30435.1| methyltransferase [Enterococcus faecium U0317]
 gi|291606106|gb|EFF35530.1| methyltransferase [Enterococcus faecium E1162]
 gi|313590608|gb|EFR69453.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a01]
 gi|313593525|gb|EFR72370.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133B]
 gi|313595550|gb|EFR74395.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133A]
 gi|313600281|gb|EFR79124.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133C]
 gi|313642954|gb|EFS07534.1| methyltransferase small domain protein [Enterococcus faecium
           TX0133a04]
 gi|313645472|gb|EFS10052.1| methyltransferase small domain protein [Enterococcus faecium
           TX0082]
          Length = 244

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 78/189 (41%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSKVFSFS------LDAVLLAHFSRVPKKG--KIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N ++E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLNEQMTVHTIDLKDSLSVVRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++    ++ +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDISSKLLKTNGRFTMVHRPDRFL 175

Query: 234 DVVRIFESR 242
           +++++ E  
Sbjct: 176 EIIQVMEDY 184


>gi|82778001|ref|YP_404350.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|81242149|gb|ABB62859.1| putative enzyme [Shigella dysenteriae Sd197]
          Length = 285

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLACAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|145630402|ref|ZP_01786183.1| phosphatidylserine synthase [Haemophilus influenzae R3021]
 gi|144984137|gb|EDJ91574.1| phosphatidylserine synthase [Haemophilus influenzae R3021]
          Length = 232

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 14/150 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             + +    ILD+G+GTG + L L + +    +   V++   A + A+ N   +    R 
Sbjct: 30  WADVKHCKNILDMGSGTGLLALMLAQRTEENCQIQAVELDPIAAKQAQENINNSVWKNRI 89

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q+D      + E  FD+IV+NPPY E  I        ++ +  ++       L    
Sbjct: 90  QLTQADIQHFLQTTEQTFDLIVANPPYFEQGIA------CKNEERALARYTKQSHL---- 139

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +  +  L+++G  S  + Y     + +
Sbjct: 140 NWLEWAATRLSENGKISFVLPYEAGKTLTK 169


>gi|307706206|ref|ZP_07643023.1| methyltransferase small domain protein [Streptococcus mitis SK321]
 gi|307618396|gb|EFN97546.1| methyltransferase small domain protein [Streptococcus mitis SK321]
          Length = 249

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 75/191 (39%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K+ +  I+D   G GAV L        
Sbjct: 20  DIKIIQNREVFSYS------VDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQ 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            + + V+I  +  ++A+ +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 71  AQILAVEIQERLADMAERSVRLNGLEEQMGVICDDLKNMPAYIQGSKVDMILCNPPYFKV 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 131 DPHSNLNESEHYLLARHEITTNL----------QEICRSAQSILKSNGRLAMVHRPDRLL 180

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 181 DILDSLQRHNL 191


>gi|309784610|ref|ZP_07679245.1| methyltransferase small domain protein [Shigella dysenteriae 1617]
 gi|262831201|sp|Q32CU6|TRMN6_SHIDS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|308927507|gb|EFP72979.1| methyltransferase small domain protein [Shigella dysenteriae 1617]
          Length = 245

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLACAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|225848651|ref|YP_002728814.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644243|gb|ACN99293.1| SAM-dependent methyltransferase [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 254

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 18/189 (9%)

Query: 62  NVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++   +    F    +      +DS L      I  +   +++DLGTG+G + + L  + 
Sbjct: 15  DLSPFVRGKVFIVQKKDGYRFNIDSLLLSDFVNI--KSSGKLIDLGTGSGIILILLSLKY 72

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIE 176
              +  G+++     ++A+ N   N V       D  +   F      FD +V NPPY +
Sbjct: 73  KNIQFYGLEVQQDLYQLAQKNIKLNNVKADLKLGDVKEVKKFYE-HQYFDYVVINPPYFK 131

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S        ++   +           L+            L   G   + +   +  + V
Sbjct: 132 SGDYKNTQEKIARSEV----------LATLEDFIKASWYLLKNKGKLFMIVPCERFSETV 181

Query: 237 RIFESRKLF 245
           +  ++  L 
Sbjct: 182 KYLKNYNLQ 190


>gi|93004889|ref|YP_579326.1| methyltransferase small [Psychrobacter cryohalolentis K5]
 gi|92392567|gb|ABE73842.1| methyltransferase small [Psychrobacter cryohalolentis K5]
          Length = 404

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 21/174 (12%)

Query: 56  GWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           GWR       N+ L++        P     V   L   LP           D+GTGTG +
Sbjct: 181 GWRVKGVAIENLGLSIFPHYGVFAPTRHEYVQLLLDAPLPA----SYDVAFDIGTGTGLL 236

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            + L +     + +  D++ +AL  A  N     +       Q+D + +   L +++V N
Sbjct: 237 AIILAQRGVK-QVIATDLNLRALACASDNLTRLDLPA-VQLQQADLYPNDAPLANLLVCN 294

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP++ +     L   V D +  +            R    G  +HL K G   +
Sbjct: 295 PPWLPAKPTSPLEFAVYDANSTM-----------LRGFLQGAKQHLAKQGEVWL 337


>gi|323167786|gb|EFZ53481.1| hypothetical protein SS53G_1987 [Shigella sonnei 53G]
          Length = 219

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQVGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|77919821|ref|YP_357636.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380]
 gi|77545904|gb|ABA89466.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 249

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 17/156 (10%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + V RI DLG G+G + L L + S   + VGV+I  ++ + A+ + + NGV +R + ++ 
Sbjct: 46  QGVERICDLGCGSGVIPLILSRTSDARRIVGVEIQEESADRARRSVLLNGVQDRVEIVRR 105

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRT 208
           D  S  E        V+++NPPY           + R     +    L GG+D       
Sbjct: 106 DVRSVREVLAAESCQVVMTNPPYRRPGTGRLAPGDERARARHE----LHGGLD------D 155

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                S  L   G   +     +  DV+       L
Sbjct: 156 FLACASYLLGTGGRFFMVHLAERLTDVLAGMRQAGL 191


>gi|55821542|ref|YP_139984.1| hypothetical protein stu1566 [Streptococcus thermophilus LMG 18311]
 gi|55823470|ref|YP_141911.1| hypothetical protein str1566 [Streptococcus thermophilus CNRZ1066]
 gi|55737527|gb|AAV61169.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55739455|gb|AAV63096.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 254

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FASTRTE 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
              + V++  +  ++AK +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APIILVELQERLADMAKRSVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  +V    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAVVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|217974528|ref|YP_002359279.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
 gi|217499663|gb|ACK47856.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
          Length = 378

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYCDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|14520460|ref|NP_125935.1| methyltransferase related protein [Pyrococcus abyssi GE5]
 gi|5457675|emb|CAB49166.1| SAM-dependent methyltransferase, putative [Pyrococcus abyssi GE5]
          Length = 248

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 26/217 (11%)

Query: 15  TGLS-SHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            GL     + + P+    +D++ R   +N   R L +++I      +  + + +      
Sbjct: 9   LGLPIRDALQIFPELREYVDEKGRLDFSNRRARILYNKAIA-----KAIFGLDIEYHPRG 63

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
               P +         +   +   R   R+L++GTG  A+   +  +    +    +I  
Sbjct: 64  LVTTPISR--------YIFLKTFLRGGERVLEIGTGHTAMMALMAAKIFNCEVTATEIDE 115

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +    AK N   NG   R           V      FDVI S PPY      D     V 
Sbjct: 116 EFFTYAKDNIERNGAKVRLIKSNGGIIRDVIPEGEKFDVIFSAPPY-----YDKPTRGVL 170

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  R  + GG  G      +      +L+KDG  ++
Sbjct: 171 TY--REGVGGGKYGERFSIKLLKEAYDYLSKDGKVAL 205


>gi|119472218|ref|ZP_01614397.1| putative ribosomal RNA small subunit methyltransferase C
           [Alteromonadales bacterium TW-7]
 gi|119445036|gb|EAW26331.1| putative ribosomal RNA small subunit methyltransferase C
           [Alteromonadales bacterium TW-7]
          Length = 341

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 44/202 (21%)

Query: 61  YNVRLTLS------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           Y+   T+S      S    P       +D+     L         ++LD G G G +   
Sbjct: 161 YHKTFTVSIADTSFSAISVPGVFNHGCLDAGTKMLLENAPSTKQGKVLDFGCGAGLIATF 220

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L  ++   + V  D+S  A          NGV+   + + SD   ++ G FD+IVSNPP+
Sbjct: 221 LGLKNTALEFVCSDVSALATYATTQTLKLNGVTG--EAILSDGLKNISGKFDLIVSNPPF 278

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC----------- 223
              +  D                      S   T      +HL K+G             
Sbjct: 279 HTGIATD---------------------YSVAETFLANAKQHLTKNGKLTIVANSFLKYP 317

Query: 224 -SVEIGYNQKVDVVRIFESRKL 244
             +E    Q      +F++ K 
Sbjct: 318 PILE---TQFETYQTVFKNNKF 336


>gi|157123130|ref|XP_001660022.1| hypothetical protein AaeL_AAEL009401 [Aedes aegypti]
 gi|108874515|gb|EAT38740.1| conserved hypothetical protein [Aedes aegypti]
          Length = 462

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 85/221 (38%), Gaps = 36/221 (16%)

Query: 57  WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV- 111
            RDF  +++ L  D   P    R    L ++  L  +L   + R  VR LD+G G   + 
Sbjct: 60  KRDF-GLQIDLPPDKLVPTLPLRLNYILWLED-LEDALGW-KSRPEVRGLDIGCGASCIY 116

Query: 112 -CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--------FSSVE 162
             L ++     ++ VG+++   ++  A+ N   N + E  D +Q           F   +
Sbjct: 117 PLLGVVHSKHRWRMVGLELLEDSVMAARKNVEGNSLQEYIDVVQQKSGDGSILKDFMGEK 176

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDF---DPRIS---------LDGGIDGLSHYRTIA 210
             FD  + NPP+ +    D    E R     +P  +         ++GG   L     I 
Sbjct: 177 ERFDFCMCNPPFFD--DHDGAVHENRTSQRKEPPNASTGSDKELRIEGGE--LRFLERII 232

Query: 211 DGVSRHLNKDGLCSV-EIGYNQ-KVDVVRIFESRKLFLVNA 249
           D     L +        IG+ +   +++RI + R +  V  
Sbjct: 233 DESLE-LKERITVYTSMIGHKKNFEEILRIMKRRSISNVTT 272


>gi|320182100|gb|EFW57004.1| putative methyltransferase [Shigella boydii ATCC 9905]
          Length = 245

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|255074075|ref|XP_002500712.1| predicted protein [Micromonas sp. RCC299]
 gi|226515975|gb|ACO61970.1| predicted protein [Micromonas sp. RCC299]
          Length = 455

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 60/172 (34%), Gaps = 30/172 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            VR  +         +T   VD     +  R       R+LD+   TG   +        
Sbjct: 244 GVRYEVD---LTKGHKTGFYVDQRDNRAEVRALGAGKKRVLDVCCYTGGFAINAAL-GGA 299

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---------GLFDVIVSNP 172
               GVD S  AL+IA+ NA  NGV  R   +QS+ F  ++         G FD+IV +P
Sbjct: 300 ADVTGVDSSPLALDIARRNADVNGVGARTTFVQSEAFKYLDDLVADSGNLGTFDMIVLDP 359

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           P         L   V       +L G       Y  +     R L   G+  
Sbjct: 360 P--------KLAPSV------NALAGAT---RKYVKMNQAAMRLLRPGGILV 394


>gi|330801618|ref|XP_003288822.1| hypothetical protein DICPUDRAFT_34643 [Dictyostelium purpureum]
 gi|325081113|gb|EGC34641.1| hypothetical protein DICPUDRAFT_34643 [Dictyostelium purpureum]
          Length = 270

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 14/182 (7%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVG- 126
            D +EP  ++ L +DS L      ++  +   +L++G+G+G V   L     P  +    
Sbjct: 24  KDVYEPAQDSFLFIDS-LQKDYEDLKTMNPYIMLEIGSGSGFVITFLANLLGPNGRYYMS 82

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCL 183
            DI+  A       +  N      D + + + SS+E   G  DV++ NPPY+ +   +  
Sbjct: 83  TDINPLAAIATSRTSSRNNA--NIDVINTSFVSSIERLKGSIDVLLFNPPYVPTPSEEVN 140

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESR 242
              +          GGI+G      +   +   L+  G   +  +  N+   V+ I    
Sbjct: 141 QGGIVAS-----WAGGINGREVIDILLPQIPSILSDKGFFYMVLVQENKPKQVISIMHGY 195

Query: 243 KL 244
             
Sbjct: 196 GF 197


>gi|193068411|ref|ZP_03049374.1| putative methyltransferase [Escherichia coli E110019]
 gi|192958363|gb|EDV88803.1| putative methyltransferase [Escherichia coli E110019]
          Length = 257

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 51  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 110

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 111 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 161 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 219

Query: 262 F 262
            
Sbjct: 220 A 220


>gi|229520914|ref|ZP_04410336.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
 gi|229342147|gb|EEO07143.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
          Length = 340

 Score = 73.6 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|328951766|ref|YP_004369100.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
 gi|328452090|gb|AEB07919.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
          Length = 262

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 17/137 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+  +++DLG G G + L L    P    VGV++      +A  N   NG   R + +QS
Sbjct: 47  REPEKVVDLGAGCGILALLLACRFPNSSFVGVELQPSLAALAVRNVRLNGFEGRIEIVQS 106

Query: 156 DWFSSV----EGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           D  S +       F+V+VSNPPY       +       +   +    L G    L     
Sbjct: 107 DMQSLLQLYPPSSFEVVVSNPPYRPLASGRLNPAAERAIARHE----LQG---SLELTAR 159

Query: 209 IADGVSRHLNKDGLCSV 225
           I       L   G   +
Sbjct: 160 I---SQHLLGYGGRLYL 173


>gi|330835849|ref|YP_004410577.1| putative methylase [Metallosphaera cuprina Ar-4]
 gi|329567988|gb|AEB96093.1| putative methylase [Metallosphaera cuprina Ar-4]
          Length = 199

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 56  GWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           G+R F     +L L  + +EP  ++ELL           ++      +LD+G+G+G + +
Sbjct: 3   GYRYFSYLGYKLCLDDNVYEPAEDSELLA--------SILDLEKGESVLDVGSGSGILGI 54

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                S   + + VDI+  A  + + +A  N +    D L  D  + +  + FD ++ NP
Sbjct: 55  V--AHSLGARVISVDINPFASLVTQCSARLNNID--IDVLNCDLTTCLRDVAFDSVIFNP 110

Query: 173 PYIESVI 179
           PY+    
Sbjct: 111 PYLPVSE 117


>gi|163787092|ref|ZP_02181539.1| methyltransferase small [Flavobacteriales bacterium ALC-1]
 gi|159876980|gb|EDP71037.1| methyltransferase small [Flavobacteriales bacterium ALC-1]
          Length = 219

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 14/131 (10%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +    +     +  + + +  D F   P    L    L   +  +E +D   +L+LG G+
Sbjct: 24  KPRAYV-----YEGIEVMVMPDVF---PPHYTLSTKILLDYIKHLELKDKT-LLELGCGS 74

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDV 167
           G V L   K+    +    DI+  AL   K    +   +   D + SD F  +    +D 
Sbjct: 75  GIVALYAAKK--GAQVTASDINPSALNALKE--ASLKNNITLDIINSDLFDVITNPSYDY 130

Query: 168 IVSNPPYIESV 178
           I  NPPY    
Sbjct: 131 IFINPPYYPKA 141


>gi|29374820|ref|NP_813972.1| hypothetical protein EF0170 [Enterococcus faecalis V583]
 gi|227555823|ref|ZP_03985870.1| methyltransferase [Enterococcus faecalis HH22]
 gi|29342278|gb|AAO80044.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|227174990|gb|EEI55962.1| methyltransferase [Enterococcus faecalis HH22]
 gi|315573622|gb|EFU85813.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0309B]
 gi|315582030|gb|EFU94221.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0309A]
          Length = 202

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGALPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|124512804|ref|XP_001349758.1| methyl transferase-like protein, putative [Plasmodium falciparum
           3D7]
 gi|23615175|emb|CAD52165.1| methyl transferase-like protein, putative [Plasmodium falciparum
           3D7]
          Length = 222

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 15/167 (8%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKESPFFK 123
            + +D + P  +T   V+ AL   + +I + D+  +L++G+G+G + L+L  +  S   K
Sbjct: 19  EIRNDVYLPSSDTFTFVE-ALEEEVDKISQ-DINIVLEMGSGSGYIILSLYEMLLSRNKK 76

Query: 124 G---VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 VDI+ KA E  K N          + ++++ F+++    LFD+++ NPPY+ + 
Sbjct: 77  IDMLYCVDINKKACECIK-NLTYENKIFNVEIIRNNLFNNIRRCELFDIVLFNPPYVITG 135

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +    ++       S  GG  G          +  +L+  G+  +
Sbjct: 136 PDEMNKTDLTA-----SYAGGKYGREIIMKFLLDIHNYLSNKGVIYL 177


>gi|327400310|ref|YP_004341149.1| methylase [Archaeoglobus veneficus SNP6]
 gi|327315818|gb|AEA46434.1| methylase [Archaeoglobus veneficus SNP6]
          Length = 180

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 25/190 (13%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           ++S+ + P  ++ELL+++A+       E      +L++G G+G V   +     F   + 
Sbjct: 1   MTSEVYPPSEDSELLLEAAMREIRLEDE------VLEVGVGSGFVSERIKDLCRFL--IA 52

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DIS  A+  +K        S+  + +++D    +   F +I+ NPPY+E    +  G  
Sbjct: 53  TDISPYAVRESK--------SKGIEVVRTDLCRGIRRKFTLILFNPPYLELSEKEKRGDW 104

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +       ++DGG  G+       D V   L ++G   + +       +    E R    
Sbjct: 105 LEK-----AVDGGKGGIEVATRFLDEVKEVLAENGRIILIVSSFNTPAIFEEIEKRGY-- 157

Query: 247 VNAFKDYGGN 256
              ++   G 
Sbjct: 158 --VYEVIAGR 165


>gi|313682871|ref|YP_004060609.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994]
 gi|313155731|gb|ADR34409.1| methyltransferase small [Sulfuricurvum kujiense DSM 16994]
          Length = 233

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 15/156 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+G G+G V L + ++       G +      E A+ NA  NG+   +   + D
Sbjct: 28  PKGKMLDVGAGSGIVGLLVARDFKEVVLEGSEKQSLYAEFARRNAQINGIG--YTLHEGD 85

Query: 157 WFS-SVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +      G +D IVSNPP+        +   L    ++  +                  +
Sbjct: 86  FLELGGHGSYDWIVSNPPFYHEGSARSENPILHQARYNIHL----------PIEAFVTKI 135

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           S+ L   G  ++     Q  ++   FESR L +V  
Sbjct: 136 SKLLKSSGEAAICYDARQFAELCSAFESRGLRVVEV 171


>gi|50119680|ref|YP_048847.1| 16S ribosomal RNA m2G1207 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
 gi|81646158|sp|Q6D984|RSMC_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|49610206|emb|CAG73649.1| ribosomal RNA small subunit methyltransferase C [Pectobacterium
           atrosepticum SCRI1043]
          Length = 348

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 23/135 (17%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   E     ++LD+  G G +   L K+SP  +    D+S  A+E + +    N +  
Sbjct: 188 LLSTFEPHMKGKVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAVESSNATLAANALEG 247

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               + S+ +S ++G FD+IVSNPP+                      DG    L     
Sbjct: 248 --SVIASNVYSDIDGRFDMIVSNPPFH---------------------DGLQTSLQAVEM 284

Query: 209 IADGVSRHLNKDGLC 223
           +  G   HL   G  
Sbjct: 285 LIRGAVTHLPIGGQL 299


>gi|332991616|gb|AEF01671.1| putative RNA methyltransferase [Alteromonas sp. SN2]
          Length = 258

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 21/171 (12%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              +      ILD+GTGTG + L + ++S    K   +DI   A   A +N   +    +
Sbjct: 47  SWAKPNQSAHILDIGTGTGILALMMAQQSLASAKITAIDIDEGAALQASANVGASPWPTK 106

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR- 207
                +     V +  FD IVSNPPY E          V+      + +   D     R 
Sbjct: 107 IVVQHTKLSDLVADNTFDFIVSNPPYFEQ---------VKGH--SHAYNSQSDTREQARQ 155

Query: 208 -------TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                   +   V  HL   G       + ++ ++  +     L      +
Sbjct: 156 TVSLTPAHLFSFVIEHLTSTGEFYCLYPFARESEITDLAAEIGLATNRILR 206


>gi|332088087|gb|EGI93212.1| methyltransferase small domain protein [Shigella boydii 5216-82]
          Length = 245

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|320200139|gb|EFW74728.1| putative methyltransferase [Escherichia coli EC4100B]
          Length = 245

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEAQLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|16077102|ref|NP_387915.1| methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221307843|ref|ZP_03589690.1| hypothetical protein Bsubs1_00170 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312165|ref|ZP_03593970.1| hypothetical protein BsubsN3_00170 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317098|ref|ZP_03598392.1| hypothetical protein BsubsJ_00170 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321361|ref|ZP_03602655.1| hypothetical protein BsubsS_00170 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|586873|sp|P37543|YABB_BACSU RecName: Full=Uncharacterized protein yabB
 gi|467424|dbj|BAA05270.1| unknown [Bacillus subtilis]
 gi|2632301|emb|CAB11810.1| putative methyltransferase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291482405|dbj|BAI83480.1| hypothetical protein BSNT_00068 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 247

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S          +I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIIQSPTVFAFSLDAVLL-------SKFAYVPIQKGKIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G V L LL        +GV+I  +  ++A  +   N + ++   +  D  +  E      
Sbjct: 57  GIVPL-LLSTRSKADILGVEIQERLHDMAVRSVEYNKLDDQIQIIHDDLKNMPEKLGHNR 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          +   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKQTEQNMNEHLRIARHEIHCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYQIE 190


>gi|325964616|ref|YP_004242522.1| methyltransferase family protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470703|gb|ADX74388.1| methyltransferase family protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 545

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 58/176 (32%), Gaps = 24/176 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            L         R +  L +  A    +    +R   R LDLGTG G     LL       
Sbjct: 152 DLAAHQQEGVLRRDHVLGIGHASTTLVQTTFRRHTERALDLGTGCGVQAFHLLHHCE--H 209

Query: 124 GVGVDISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSSVEG-LFDVIVSNPP 173
               DIS +AL   + N + N          ++ER           V G  F ++VSNPP
Sbjct: 210 VTATDISERALAFTRFNILLNAEALSVDPARLAERVSLRLGSLLDPVAGEEFGLVVSNPP 269

Query: 174 YI----ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++     +          R        DGG+ G     ++   +   L   G   +
Sbjct: 270 FVITPRSAGEDAAGQFTYR--------DGGLPGDEIVSSLVRALPSVLAPAGTAQL 317


>gi|227513166|ref|ZP_03943215.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
 gi|227083547|gb|EEI18859.1| methyltransferase [Lactobacillus buchneri ATCC 11577]
          Length = 250

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 25/172 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F    +  LL + A      ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFSFSLDAVLLAEFA------QVGSKRVKNIIDLCSGNGAVGLFLSSET-S 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   V+I  K  ++A  +   N +  +   +  D  ++         DVIV NPPY  +
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPYFVN 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +   + +I++D           I    +  L  +    V
Sbjct: 131 YETSEKNPNQYLAIARHEIKITID----------EITKISADLLKTNAKLFV 172


>gi|28377564|ref|NP_784456.1| 16S RNA methylase [Lactobacillus plantarum WCFS1]
 gi|300769758|ref|ZP_07079640.1| methyltransferase domain protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308179717|ref|YP_003923845.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28270396|emb|CAD63299.1| 16S RNA methylase [Lactobacillus plantarum WCFS1]
 gi|300492666|gb|EFK27852.1| methyltransferase domain protein [Lactobacillus plantarum subsp.
           plantarum ATCC 14917]
 gi|308045208|gb|ADN97751.1| 16S RNA methylase [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 202

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 71/196 (36%), Gaps = 35/196 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKE 118
           ++ + T  +  F  R      VD      L   +  D+    +LDLGTG G + +AL  +
Sbjct: 26  HSFKFTTDNGVFSKRT-----VDYGSRTLLAAFDPTDLPAGPMLDLGTGYGPIGMALAYQ 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           SP      VD++  AL +A+ N   N ++   +   SD +  V    +  IV+NPP    
Sbjct: 81  SPERTVDMVDVNELALSLARKNVALNQITNT-NIFTSDVYQQVTATNYAAIVTNPP---- 135

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                    VR             G +    +  G    L   G  +V +   Q      
Sbjct: 136 ---------VRA------------GKAVVDAMLTGAVSRLVVGGTLTVVLQKKQGAPSAK 174

Query: 237 RIFESRKLFLVNAFKD 252
           ++ ++         KD
Sbjct: 175 KLMQTTFGNCQVIKKD 190


>gi|229512885|ref|ZP_04402352.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
 gi|229350134|gb|EEO15087.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
          Length = 340

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|254291240|ref|ZP_04962035.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422804|gb|EDN14756.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 340

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|153217439|ref|ZP_01951181.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113552|gb|EAY32372.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 340

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|116670926|ref|YP_831859.1| methyltransferase small [Arthrobacter sp. FB24]
 gi|116611035|gb|ABK03759.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Arthrobacter sp. FB24]
          Length = 382

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 45/130 (34%), Gaps = 22/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++DLG GTG +     K  P  K    D S  A++ A++ A  NG+  R   LQ 
Sbjct: 233 PSAGNVVDLGCGTGILAAMYAKSHPESKVTATDQSAAAVDSARATAEANGLGGRVTVLQD 292

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  SS+      +I+ NPP+     V                  GI        +     
Sbjct: 293 DAMSSLPDSSAGLILLNPPFHLGASVHA--------------GAGI-------KMFRAAG 331

Query: 215 RHLNKDGLCS 224
           R L   G   
Sbjct: 332 RVLEPGGELW 341


>gi|257087942|ref|ZP_05582303.1| methyltransferase small [Enterococcus faecalis D6]
 gi|312901155|ref|ZP_07760442.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0470]
 gi|256995972|gb|EEU83274.1| methyltransferase small [Enterococcus faecalis D6]
 gi|311291744|gb|EFQ70300.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0470]
 gi|315026767|gb|EFT38699.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2137]
          Length = 202

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|256761972|ref|ZP_05502552.1| methyltransferase [Enterococcus faecalis T3]
 gi|256683223|gb|EEU22918.1| methyltransferase [Enterococcus faecalis T3]
          Length = 202

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSTEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|227519961|ref|ZP_03950010.1| methyltransferase [Enterococcus faecalis TX0104]
 gi|229546999|ref|ZP_04435724.1| methyltransferase [Enterococcus faecalis TX1322]
 gi|255971674|ref|ZP_05422260.1| methyltransferase [Enterococcus faecalis T1]
 gi|256618411|ref|ZP_05475257.1| methyltransferase [Enterococcus faecalis ATCC 4200]
 gi|256855133|ref|ZP_05560494.1| methyltransferase small [Enterococcus faecalis T8]
 gi|256956892|ref|ZP_05561063.1| methyltransferase [Enterococcus faecalis DS5]
 gi|257078562|ref|ZP_05572923.1| methyltransferase small [Enterococcus faecalis JH1]
 gi|257084115|ref|ZP_05578476.1| methyltransferase small [Enterococcus faecalis Fly1]
 gi|257088620|ref|ZP_05582981.1| methyltransferase [Enterococcus faecalis CH188]
 gi|257418729|ref|ZP_05595723.1| methyltransferase [Enterococcus faecalis T11]
 gi|257421465|ref|ZP_05598455.1| methyltransferase [Enterococcus faecalis X98]
 gi|300862211|ref|ZP_07108291.1| methyltransferase small domain protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307269054|ref|ZP_07550416.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4248]
 gi|307276363|ref|ZP_07557488.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2134]
 gi|307287050|ref|ZP_07567123.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0109]
 gi|312952570|ref|ZP_07771435.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0102]
 gi|227072509|gb|EEI10472.1| methyltransferase [Enterococcus faecalis TX0104]
 gi|229307927|gb|EEN73914.1| methyltransferase [Enterococcus faecalis TX1322]
 gi|255962692|gb|EET95168.1| methyltransferase [Enterococcus faecalis T1]
 gi|256597938|gb|EEU17114.1| methyltransferase [Enterococcus faecalis ATCC 4200]
 gi|256709646|gb|EEU24693.1| methyltransferase small [Enterococcus faecalis T8]
 gi|256947388|gb|EEU64020.1| methyltransferase [Enterococcus faecalis DS5]
 gi|256986592|gb|EEU73894.1| methyltransferase small [Enterococcus faecalis JH1]
 gi|256992145|gb|EEU79447.1| methyltransferase small [Enterococcus faecalis Fly1]
 gi|256997432|gb|EEU83952.1| methyltransferase [Enterococcus faecalis CH188]
 gi|257160557|gb|EEU90517.1| methyltransferase [Enterococcus faecalis T11]
 gi|257163289|gb|EEU93249.1| methyltransferase [Enterococcus faecalis X98]
 gi|295112480|emb|CBL31117.1| 16S rRNA m(2)G 1207 methyltransferase [Enterococcus sp. 7L76]
 gi|300848736|gb|EFK76493.1| methyltransferase small domain protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306501829|gb|EFM71119.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0109]
 gi|306506968|gb|EFM76113.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2134]
 gi|306514624|gb|EFM83177.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4248]
 gi|310629471|gb|EFQ12754.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0102]
 gi|315028782|gb|EFT40714.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4000]
 gi|315031193|gb|EFT43125.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0017]
 gi|315035972|gb|EFT47904.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0027]
 gi|315143269|gb|EFT87285.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2141]
 gi|315147092|gb|EFT91108.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4244]
 gi|315151191|gb|EFT95207.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0012]
 gi|315153419|gb|EFT97435.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0031]
 gi|315156294|gb|EFU00311.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0043]
 gi|315158568|gb|EFU02585.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0312]
 gi|315160863|gb|EFU04880.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0645]
 gi|315165823|gb|EFU09840.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1302]
 gi|315168183|gb|EFU12200.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1341]
 gi|315171354|gb|EFU15371.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1342]
 gi|315172588|gb|EFU16605.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1346]
 gi|315579395|gb|EFU91586.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0630]
 gi|323479387|gb|ADX78826.1| S-adenosylmethionine-dependent methyltransferase domain protein
           [Enterococcus faecalis 62]
 gi|327533971|gb|AEA92805.1| methyltransferase domain protein [Enterococcus faecalis OG1RF]
 gi|329570892|gb|EGG52602.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1467]
          Length = 202

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|24113916|ref|NP_708426.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30063976|ref|NP_838147.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|110806519|ref|YP_690039.1| hypothetical protein SFV_2638 [Shigella flexneri 5 str. 8401]
 gi|331678572|ref|ZP_08379247.1| hypothetical protein ECPG_01247 [Escherichia coli H591]
 gi|332278267|ref|ZP_08390680.1| conserved hypothetical protein [Shigella sp. D9]
 gi|24053019|gb|AAN44133.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30042232|gb|AAP17957.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|110616067|gb|ABF04734.1| putative enzyme [Shigella flexneri 5 str. 8401]
 gi|281601987|gb|ADA74971.1| hypothetical protein SFxv_2894 [Shigella flexneri 2002017]
 gi|331075032|gb|EGI46352.1| hypothetical protein ECPG_01247 [Escherichia coli H591]
 gi|332100619|gb|EGJ03965.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 285

 Score = 73.2 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|254390907|ref|ZP_05006117.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
 gi|197704604|gb|EDY50416.1| N-methyl-transferase [Streptomyces clavuligerus ATCC 27064]
          Length = 222

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 22/170 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               T   + F P             F    +       +L++G+GTG   +     S  
Sbjct: 19  GRDWTQLPEVFAPHLTGST------EFFSTHLPYPVGGSLLEVGSGTGVTAVTAAL-SGC 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIV--SNPPYIES 177
            + V VDIS  A+  +  NA  + VS+R   L+SD F ++  +  FD I   SN  Y  +
Sbjct: 72  ARVVAVDISPAAVCNSLLNAECHRVSDRVRVLESDLFGALAPDERFDAIFWNSNVIYTPA 131

Query: 178 VIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   ++    FDP   L G                 HL + G   +
Sbjct: 132 GFAGSGPGDLHGAVFDPGYVLHG---------RYLREGPDHLAQGGRLLL 172


>gi|193064025|ref|ZP_03045110.1| putative methyltransferase [Escherichia coli E22]
 gi|194429278|ref|ZP_03061805.1| putative methyltransferase [Escherichia coli B171]
 gi|209920054|ref|YP_002294138.1| hypothetical protein ECSE_2863 [Escherichia coli SE11]
 gi|218555157|ref|YP_002388070.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|256017275|ref|ZP_05431140.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Shigella sp. D9]
 gi|260845260|ref|YP_003223038.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|260856669|ref|YP_003230560.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|260869262|ref|YP_003235664.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|307313854|ref|ZP_07593470.1| methyltransferase small [Escherichia coli W]
 gi|331669326|ref|ZP_08370174.1| hypothetical protein ECLG_01088 [Escherichia coli TA271]
 gi|262828119|sp|B7M8I9|TRMN6_ECO8A RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828233|sp|B6I5E9|TRMN6_ECOSE RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831209|sp|Q0T1T1|TRMN6_SHIF8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831223|sp|Q83QI2|TRMN6_SHIFL RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|192929260|gb|EDV82869.1| putative methyltransferase [Escherichia coli E22]
 gi|194412686|gb|EDX28981.1| putative methyltransferase [Escherichia coli B171]
 gi|209913313|dbj|BAG78387.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218361925|emb|CAQ99525.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI1]
 gi|257755318|dbj|BAI26820.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O26:H11 str. 11368]
 gi|257760407|dbj|BAI31904.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O103:H2 str. 12009]
 gi|257765618|dbj|BAI37113.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O111:H- str. 11128]
 gi|306906355|gb|EFN36870.1| methyltransferase small [Escherichia coli W]
 gi|313648254|gb|EFS12698.1| methyltransferase small domain protein [Shigella flexneri 2a str.
           2457T]
 gi|315061894|gb|ADT76221.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli W]
 gi|323156233|gb|EFZ42392.1| methyltransferase small domain protein [Escherichia coli EPECa14]
 gi|323159232|gb|EFZ45222.1| methyltransferase small domain protein [Escherichia coli E128010]
 gi|323177295|gb|EFZ62883.1| methyltransferase small domain protein [Escherichia coli 1180]
 gi|323184545|gb|EFZ69919.1| methyltransferase small domain protein [Escherichia coli 1357]
 gi|323377525|gb|ADX49793.1| methyltransferase small [Escherichia coli KO11]
 gi|331064520|gb|EGI36431.1| hypothetical protein ECLG_01088 [Escherichia coli TA271]
 gi|332753985|gb|EGJ84359.1| methyltransferase small domain protein [Shigella flexneri 4343-70]
 gi|332755824|gb|EGJ86182.1| methyltransferase small domain protein [Shigella flexneri 2747-71]
 gi|332761969|gb|EGJ92242.1| methyltransferase small domain protein [Shigella flexneri K-671]
 gi|332766577|gb|EGJ96782.1| S-adenosyl-L-methionine-dependent methyltransferase [Shigella
           flexneri 2930-71]
 gi|333000435|gb|EGK20017.1| methyltransferase small domain protein [Shigella flexneri VA-6]
 gi|333000850|gb|EGK20422.1| methyltransferase small domain protein [Shigella flexneri K-218]
 gi|333001668|gb|EGK21235.1| methyltransferase small domain protein [Shigella flexneri K-272]
 gi|333015944|gb|EGK35279.1| methyltransferase small domain protein [Shigella flexneri K-227]
 gi|333016822|gb|EGK36148.1| methyltransferase small domain protein [Shigella flexneri K-304]
          Length = 245

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|325977803|ref|YP_004287519.1| hypothetical protein SGGBAA2069_c06030 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325177731|emb|CBZ47775.1| hypothetical protein SGGBAA2069_c06030 [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 249

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY--I 175
              + V++  +   +A+ +   N +  +   +  D  + +  +     D+I+ NPPY  +
Sbjct: 70  APIIEVELQERLANMAERSIQLNQLENQVQIINDDLKNLLNHVPRSGVDLILCNPPYFKV 129

Query: 176 ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I +     L  +G  ++    ++ +
Sbjct: 130 SETSKKNLSEHYLLARHEIATNL----------EEICEVARHALKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|85858414|ref|YP_460616.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
           SB]
 gi|85721505|gb|ABC76448.1| ribosomal protein L11 methyltransferase [Syntrophus aciditrophicus
           SB]
          Length = 319

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L   +      + + +LD+GTGTG + +A  K     + + VDI  KA EIAK N   
Sbjct: 166 EVLEDLILTRRSPEPLNVLDVGTGTGILGIASAKLGAE-RVLCVDIDPKATEIAKENIAI 224

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           N V +R    Q +  S+++G +++IV+N
Sbjct: 225 NHVEDRVSVRQEEI-STLKGTYNLIVAN 251


>gi|306818494|ref|ZP_07452217.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|307700681|ref|ZP_07637706.1| methyltransferase small domain protein [Mobiluncus mulieris
           FB024-16]
 gi|304648667|gb|EFM45969.1| possible 16S rRNA methyltransferase [Mobiluncus mulieris ATCC
           35239]
 gi|307613676|gb|EFN92920.1| methyltransferase small domain protein [Mobiluncus mulieris
           FB024-16]
          Length = 268

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 68/192 (35%), Gaps = 33/192 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLAL 115
             +   +   + +D+     +    +D   A  L ++ K  +    +D+G G G + L +
Sbjct: 85  EVELAGMTFRIHTDSGVFSGDG---LDKGTAVLLRKVPKLPEGGVFVDVGCGWGPLSLVM 141

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPY 174
            ++ P  + V VD++ +AL++   NA  NG+         +      +G  DVI SNPP 
Sbjct: 142 ARQRPAARVVAVDVNARALDLTAKNARENGLGNLEVLAEAAALAQLADGSVDVIWSNPP- 200

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH-LNKDGLCSVEIGYNQKV 233
                       VR          G D L    T      R  L   G+  + +G N   
Sbjct: 201 ------------VRI---------GKDALHAMWT----AWRVKLRPGGVAYLVMGRNLGA 235

Query: 234 DV-VRIFESRKL 244
           D           
Sbjct: 236 DTFAAWARDSGW 247


>gi|302785964|ref|XP_002974754.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii]
 gi|300157649|gb|EFJ24274.1| hypothetical protein SELMODRAFT_102305 [Selaginella moellendorffii]
          Length = 261

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 13/184 (7%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
            +D +EP  ++  LVD+ LA     + +      +++G G+G    ++ L L  E    +
Sbjct: 11  HADVYEPCDDSFALVDALLAD-RSHLAELQPKLCMEIGCGSGYVISSLALMLRDEVESSQ 69

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            V  DI+  A E        +GVS       L S     + G  D++V NPPY+ +   +
Sbjct: 70  YVATDINQAATETTLETLKAHGVSADVVRTDLVSGLERRLAGSVDLLVFNPPYVPTPEDE 129

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFE 240
                +       +  GG  G      +   V   ++  G   +  +  N   ++ RI +
Sbjct: 130 VGAPGITG-----TWAGGDRGRVVIDRLLGVVDGIISSRGCFYLVTLTANNPGEICRIMQ 184

Query: 241 SRKL 244
           S+  
Sbjct: 185 SKGF 188


>gi|289705498|ref|ZP_06501890.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289557727|gb|EFD51026.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 405

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G + +   +  P    V  D S  A+    + A  N V++R   +
Sbjct: 258 DPRPPGRVVDLGCGNGLLSVGAARLWPHVTVVATDQSAVAVASTLATARANRVADRVRAV 317

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + D  ++  +G  + ++ NPP+ +   VD          P ++             +   
Sbjct: 318 RDDALATWPDGTEECVLLNPPFHDGNAVD----------PSVA-----------HRLVAA 356

Query: 213 VSRHLNKDGLCSV 225
            +R L   G    
Sbjct: 357 AARVLEPGGRLWC 369


>gi|229470429|sp|A1RN12|RLMG_SHESW RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 378

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPTDKGHFYWDDCMTHLPDDVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L + G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKEGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|309809495|ref|ZP_07703353.1| GIY-YIG catalytic domain protein [Lactobacillus iners SPIN
           2503V10-D]
 gi|308170167|gb|EFO72202.1| GIY-YIG catalytic domain protein [Lactobacillus iners SPIN
           2503V10-D]
          Length = 334

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    AK +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAKRSVSLNQLENRITVHCINALDAPKNLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKLFIVH 173


>gi|309807205|ref|ZP_07701179.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
 gi|308166426|gb|EFO68631.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           03V1-b]
          Length = 316

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    AK +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAKRSVSLNQLENRITVHCINALDAPKNLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKLFIVH 173


>gi|309804244|ref|ZP_07698321.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
 gi|308163647|gb|EFO65917.1| methyltransferase small domain protein [Lactobacillus iners LactinV
           11V1-d]
          Length = 284

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    AK +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAKRSVSLNQLENRITVHCINALDAPKNLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKLFIVH 173


>gi|259501574|ref|ZP_05744476.1| methyltransferase [Lactobacillus iners DSM 13335]
 gi|302191452|ref|ZP_07267706.1| hypothetical protein LineA_05554 [Lactobacillus iners AB-1]
 gi|312873338|ref|ZP_07733391.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 2052A-d]
 gi|312875785|ref|ZP_07735777.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 2053A-b]
 gi|325913457|ref|ZP_08175823.1| GIY-YIG catalytic domain protein [Lactobacillus iners UPII 60-B]
 gi|259167092|gb|EEW51587.1| methyltransferase [Lactobacillus iners DSM 13335]
 gi|311088689|gb|EFQ47141.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 2053A-b]
 gi|311091128|gb|EFQ49519.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 2052A-d]
 gi|325477226|gb|EGC80372.1| GIY-YIG catalytic domain protein [Lactobacillus iners UPII 60-B]
          Length = 342

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    AK +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAKRSVSLNQLENRITVHCINALDAPKNLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKLFIVH 173


>gi|257869714|ref|ZP_05649367.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803878|gb|EEV32700.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 244

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 29/206 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS+ F         +D+ L  + P I KR   RI+DL  G GAV L + +++  
Sbjct: 15  DIKIIQSSEVFSFS------LDAVLLANFPTIPKRG--RIVDLCAGNGAVGLFISRKT-S 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVE-GLFDVIVSNPPYIES 177
                +++  +  ++A+ +   NG+ E+      D    F+ ++    D++V NPPY ++
Sbjct: 66  AHIYQIELQDRLADMAQRSVSLNGLEEQITVYPMDLKNIFTKIKPDSVDLLVCNPPYFKN 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           V            +   +   +LD           +    S+ L  +G  ++    ++ +
Sbjct: 126 VPTAVKNPNPYLAIARHEIETTLD----------EVVYTASKALKMNGRFAMVHRPDRFL 175

Query: 234 DVVRIFESRKLFLVNAFKDY--GGND 257
           D++      ++        Y   G D
Sbjct: 176 DILDCMRKYRIAPKRVRFVYPKAGKD 201


>gi|289803616|ref|ZP_06534245.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 134

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 23/113 (20%)

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +  AL   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G FD+I+S
Sbjct: 2   LSAALASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRFDMIIS 59

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           NPP+                      DG    L   +T+  G  RHLN  G  
Sbjct: 60  NPPFH---------------------DGMQTSLDAAQTLIRGAVRHLNSGGEL 91


>gi|260576243|ref|ZP_05844235.1| methyltransferase small [Rhodobacter sp. SW2]
 gi|259021511|gb|EEW24815.1| methyltransferase small [Rhodobacter sp. SW2]
          Length = 252

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 72/190 (37%), Gaps = 28/190 (14%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L     +PR       D  L      +       +LDLG G G   L L    
Sbjct: 12  FLGGRLHL----LQPRRGYRAASDPVL--LAACVGASAGQSVLDLGCGAGTAVLCLGARV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIE 176
           P     G+++     ++A+ NA  NG++   + ++ D       +   FD +++NPPY  
Sbjct: 66  PGLALAGLELQADYADLARRNAARNGLA--LEVVEGDLAQMPGVLLRDFDHVIANPPYYP 123

Query: 177 S----VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
           +           + +R   P ++L              +  +R L   G  ++ +G ++ 
Sbjct: 124 TTGSASPDAGRDMALRTSQP-LALW------------IESATRRLAPGGWLTLILGTDRL 170

Query: 233 VDVVRIFESR 242
            + +   ++R
Sbjct: 171 PEALAAMDAR 180


>gi|219850518|ref|YP_002464951.1| methyltransferase small [Chloroflexus aggregans DSM 9485]
 gi|219544777|gb|ACL26515.1| methyltransferase small [Chloroflexus aggregans DSM 9485]
          Length = 202

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 56/182 (30%), Gaps = 37/182 (20%)

Query: 82  VDSALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +D      L  IE        ILDLG G G + + L +  P      VD    A+  A+ 
Sbjct: 39  IDEGTDLLLRLIEPAMTTPQHILDLGCGCGVIGICLARRFPNAHVTLVDKDLLAVRYARH 98

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           NA+ N               +  G +D+IVSN P         +G    + +        
Sbjct: 99  NAILNATPNVTVLGSVGLSDAPPGPYDLIVSNIP-------AKIGDYAIEHE-------- 143

Query: 200 IDGLSHYRTIADGVSRHLNKDG--LCSVE---------IGYNQKVDVVRIFESRKLFLVN 248
                    I   + RHL   G     V          +G   ++ +  I +     +  
Sbjct: 144 --------FILAPL-RHLRPGGEYWFVVVSGLNHLIPRLGPRHQLRLKEIKKRAGHSVYR 194

Query: 249 AF 250
             
Sbjct: 195 II 196


>gi|302760487|ref|XP_002963666.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii]
 gi|300168934|gb|EFJ35537.1| hypothetical protein SELMODRAFT_79357 [Selaginella moellendorffii]
          Length = 262

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 13/184 (7%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
            +D +EP  ++  LVD+ LA     + +      +++G G+G    ++ L L  E    +
Sbjct: 11  HADVYEPCDDSFALVDALLAD-RSHLAELQPKLCMEIGCGSGYVISSLALMLRDEVESSQ 69

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            V  DI+  A E        +GVS       L S     + G  D++V NPPY+ +   +
Sbjct: 70  YVATDINQAATETTLETLKAHGVSADVVRTDLVSGLERRLAGSVDLLVFNPPYVPTPEDE 129

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFE 240
                +       +  GG  G      +   V   ++  G   +  +  N   ++ RI +
Sbjct: 130 VGAPGITG-----TWAGGDRGRVVIDRLLGVVDGIISSRGCFYLVTLTANNPGEICRIMQ 184

Query: 241 SRKL 244
           S+  
Sbjct: 185 SKGF 188


>gi|257081465|ref|ZP_05575826.1| methyltransferase small [Enterococcus faecalis E1Sol]
 gi|256989495|gb|EEU76797.1| methyltransferase small [Enterococcus faecalis E1Sol]
          Length = 202

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPSGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|256960699|ref|ZP_05564870.1| methyltransferase small [Enterococcus faecalis Merz96]
 gi|293384758|ref|ZP_06630610.1| methyltransferase domain protein [Enterococcus faecalis R712]
 gi|293388025|ref|ZP_06632555.1| methyltransferase domain protein [Enterococcus faecalis S613]
 gi|312908686|ref|ZP_07767627.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           512]
 gi|312909166|ref|ZP_07768024.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           516]
 gi|256951195|gb|EEU67827.1| methyltransferase small [Enterococcus faecalis Merz96]
 gi|291077935|gb|EFE15299.1| methyltransferase domain protein [Enterococcus faecalis R712]
 gi|291082583|gb|EFE19546.1| methyltransferase domain protein [Enterococcus faecalis S613]
 gi|310625367|gb|EFQ08650.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           512]
 gi|311290508|gb|EFQ69064.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           516]
          Length = 202

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPSGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|227893454|ref|ZP_04011259.1| ribosomal protein L11 methyltransferase [Lactobacillus ultunensis
           DSM 16047]
 gi|227864733|gb|EEJ72154.1| ribosomal protein L11 methyltransferase [Lactobacillus ultunensis
           DSM 16047]
          Length = 314

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 84/264 (31%), Gaps = 68/264 (25%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKH---------ESIHRI------LGWRDFYN-- 62
                  D   D  +        ++ L+           SI  I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADKDELVKKFAEKLKELQGYGLNIGDGKISISYIKDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR------------DVVRILD 103
                L +      ++P  + + L+  D  LAF     +                + ++D
Sbjct: 123 DFSRHLAIVPKWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAMVKPMSVVD 182

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+G + +A   +      +  DIS +++   K N+  N ++      ++   + V+G
Sbjct: 183 VGTGSGILAIA-ASKLGATDVLATDISDESMTATKQNSALNDLT-NIRVQKTSLLADVKG 240

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IV+N                      ++             +   +  HLN+ G  
Sbjct: 241 KFDIIVAN---------------------ILA--------EILLDLIPQMDAHLNEGGEV 271

Query: 224 SV-EIGYNQKVDVVRIFESRKLFL 246
               I Y Q   + +        +
Sbjct: 272 IFSGIDYLQLPKIKKALNENGFKI 295


>gi|167769486|ref|ZP_02441539.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM
           17241]
 gi|167668454|gb|EDS12584.1| hypothetical protein ANACOL_00820 [Anaerotruncus colihominis DSM
           17241]
          Length = 306

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 79/232 (34%), Gaps = 56/232 (24%)

Query: 55  LGWRDFY-----NVRLTLSSDT--FEPRPETELLVD-------------SALAFSLPRIE 94
             W+ +Y       RL +      + P P   +L               + L   L    
Sbjct: 107 TAWKKYYFPTKIGERLVICPSWESYAPAPGETVLTMDPGMAFGTGTHETTRLCIQLLEEA 166

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               + +LD+GTG+G + +A L        VGVDI   A+ +A+ NA  NGV  R   + 
Sbjct: 167 VTPGMDLLDIGTGSGILAIAALLFGARA-AVGVDIDEVAVRVARENAKANGVGGRARFIA 225

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D  + V+G+F V+ +N                      ++             +   + 
Sbjct: 226 GDLAAKVDGVFPVVTAN---------------------IVA--------DVIIRLIPDLG 256

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
           R L + G       I   ++ DV    E+     V    + GG   V L  R
Sbjct: 257 RFLTEGGAFIASGIIDARER-DVTSALEAAGYR-VEKRCESGGW--VALLAR 304


>gi|254293447|ref|YP_003059470.1| methyltransferase small [Hirschia baltica ATCC 49814]
 gi|254041978|gb|ACT58773.1| methyltransferase small [Hirschia baltica ATCC 49814]
          Length = 244

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     RIL+ G G GA  L+           G++   + L +A+ N   N + +R + 
Sbjct: 36  LEAAPKQRILEAGCGAGAALLSCAHRLQGVHVAGLERDERMLALAQQNVAENALQDRVEV 95

Query: 153 LQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLG 184
            Q D      S+   +D + SNPP+     +  +G
Sbjct: 96  FQGDVSNRPDSLLNAYDQVFSNPPFFNPSTIQAVG 130


>gi|89072529|ref|ZP_01159101.1| hypothetical O-methyltransferase [Photobacterium sp. SKA34]
 gi|89051633|gb|EAR57086.1| hypothetical O-methyltransferase [Photobacterium sp. SKA34]
          Length = 240

 Score = 73.2 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE----SPFFKGVGVDISCKALEIAKSNAVTNGVS 147
                   +++D+GTG+G + L   +     +       ++I  +A   A+ N   +   
Sbjct: 31  WAAMPQQGKVVDIGTGSGLLALMAAQRTSTLASSITIEAIEIDPQAAAAARQNFTNSPWY 90

Query: 148 ERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +R   ++ D      +      + IV NPPY                    +     D  
Sbjct: 91  QRLHCIEQDVTTWRHTQQPNSVNAIVCNPPYFNFGQQAEQS--------HRATARHTDTF 142

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           SH + +   +   L ++G+ S+ +   +   ++       L+ + 
Sbjct: 143 SH-QQLLKTLQWLLTEEGIASIILPSYEGQRLIEAAAEYHLYCIE 186


>gi|294142465|ref|YP_003558443.1| methyltransferase [Shewanella violacea DSS12]
 gi|293328934|dbj|BAJ03665.1| methyltransferase, putative [Shewanella violacea DSS12]
          Length = 343

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 46/132 (34%), Gaps = 31/132 (23%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   R+LD G G G +  ALLK  P  +   VDI+  AL   +     N       T  
Sbjct: 199 PRMKGRVLDFGCGAGVIAAALLKAQPKLQIECVDINAMALASCELTLKANNFIA--ATYP 256

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL----SHYRTIA 210
           SD  +  +  FD I+SNPP+                          DGL       +   
Sbjct: 257 SDGLNQTQDKFDGIISNPPF-------------------------HDGLKGTTEIVKNFV 291

Query: 211 DGVSRHLNKDGL 222
               + L K G+
Sbjct: 292 SDSVKKLKKGGV 303


>gi|146319220|ref|YP_001198932.1| O-methyltransferase [Streptococcus suis 05ZYH33]
 gi|146321422|ref|YP_001201133.1| O-methyltransferase [Streptococcus suis 98HAH33]
 gi|145690026|gb|ABP90532.1| Predicted O-methyltransferase [Streptococcus suis 05ZYH33]
 gi|145692228|gb|ABP92733.1| Predicted O-methyltransferase [Streptococcus suis 98HAH33]
 gi|292558853|gb|ADE31854.1| Predicted O-methyltransferase [Streptococcus suis GZ1]
          Length = 260

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 20/188 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +      + R      +DS L    P++  +  + I+DL +G GAV L         + 
Sbjct: 27  FSTDVQIIQNREVFSYSIDSVLLSRFPKMPAQKGL-IVDLCSGNGAVGL-FASTRTKAQI 84

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
           + V++  +   + + +   NG+ ++   +  D  +     +    D+++ NPPY +    
Sbjct: 85  IQVELQERLANMNRRSIALNGLEDQVSVINDDLANLPQYDLRSKVDLMLCNPPYFKVDKE 144

Query: 181 DCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             L       +   +   +LD           I     + L  +G  ++    ++ +D++
Sbjct: 145 SNLNESEHYLLARHEIATNLDS----------ICQVAQQVLKSNGRLAMVHRPDRFLDIL 194

Query: 237 RIFESRKL 244
               + KL
Sbjct: 195 DTLRTYKL 202


>gi|251791015|ref|YP_003005736.1| 16S ribosomal RNA m2G1207 methyltransferase [Dickeya zeae Ech1591]
 gi|247539636|gb|ACT08257.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya zeae Ech1591]
          Length = 342

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +E     ++LDL  G G +  +  + SP  +    D+   ALE +++   
Sbjct: 182 DVGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAALEASRATLA 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +  +   + S+ +S ++G FD+I+SNPP+                      DG    
Sbjct: 242 ANELEGQV--IASNVYSDIQGRFDLIISNPPFH---------------------DGMQTS 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L     +  G + HLN +G  
Sbjct: 279 LHAAEMMIRGAAAHLNMEGEL 299


>gi|227890817|ref|ZP_04008622.1| ribosomal protein L11 methyltransferase [Lactobacillus salivarius
           ATCC 11741]
 gi|227867226|gb|EEJ74647.1| ribosomal protein L11 methyltransferase [Lactobacillus salivarius
           ATCC 11741]
          Length = 296

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 54/220 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       + +  S + ++   E E+L+               + LA        
Sbjct: 93  WKKYYHPVRLTKYLTIVPSWEEYQKEQEDEILIRLDPGRAFGTGTHPTTQLALQALETSV 152

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  +     K    DI   A+  AK N   N VS   +   +
Sbjct: 153 RGNESMIDVGTGSGVLSIA-ARHFGVDKVYAYDIDDNAVTAAKENFALNPVSNNIEIKPN 211

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V    D+IV+N                      ++             +      
Sbjct: 212 NLLEGVHKNVDLIVAN---------------------ILA--------EIIVPLIPQAKS 242

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF--KD 252
           +L   G+     I  ++K  ++   E     +      KD
Sbjct: 243 NLKDGGIFITSGIINDKKELILTELEQNGFVVDEILNKKD 282


>gi|152967304|ref|YP_001363088.1| methylase [Kineococcus radiotolerans SRS30216]
 gi|151361821|gb|ABS04824.1| putative methylase [Kineococcus radiotolerans SRS30216]
          Length = 236

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCL 183
             VD+S +A+  A++NA       R    + D F  V +  F ++++NPPY+ +   D L
Sbjct: 56  TAVDLSHRAVLTARANARL--ARVRVQVRRGDLFEPVRDRRFGLVLANPPYVPAA-TDRL 112

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   P  S DGGIDG +    I +GV+  L   G   +
Sbjct: 113 PR----HRPGRSWDGGIDGRAVLDRICEGVAGVLTPGGRFLL 150


>gi|332975773|gb|EGK12654.1| ribosomal protein L11 methyltransferase [Desmospora sp. 8437]
          Length = 341

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 54/228 (23%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNV-----RLTLSSDT--FEPRPETELLVD-------- 83
              ++  +  ES      W+ +Y       RLT+      +EP    E ++         
Sbjct: 128 ATVVLERVSEESWA--EAWKAYYKPIRVTDRLTVKPHWESYEPASAGEAVIQLDPGMAFG 185

Query: 84  ------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
                 + L+  L   + +   +++D+G G+G + +A        + + +D+   A+E  
Sbjct: 186 TGAHPTTILSMKLLERQLQPGQKVIDVGCGSGVLSIA-AARLGASEVLALDLDPVAVEST 244

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             N   NG+ +R    Q +    V    D ++SN                      ++  
Sbjct: 245 SQNIRLNGLEQRIAVRQGNLLQGVRESADGVISN---------------------ILA-- 281

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                        D + R ++  G      +   ++ DVVR       
Sbjct: 282 ------EIIIQFTDDLPRVIHPGGWFIASGVIAQKEEDVVRALSQAGF 323


>gi|154509065|ref|ZP_02044707.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798699|gb|EDN81119.1| hypothetical protein ACTODO_01582 [Actinomyces odontolyticus ATCC
           17982]
          Length = 204

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 40/204 (19%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +++ + +SS  F   +    T  L++ A        +  +    LDLG G G +   +  
Sbjct: 27  FDLSMRVSSRVFSGSKLDLGTRQLLEIA-------PDLPEDGTFLDLGCGWGPIATIMSL 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPP 173
           ESP      VD++ +A+++ + NA +NG       L+++         +  FDVI SNPP
Sbjct: 80  ESPNADVWAVDVNSRAVDLTQRNAQSNGAKG-VRALKAEEALTSSQESDTRFDVIWSNPP 138

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG-----GIDGLSHYRTI-ADGVSRHLNKDGLCSVEI 227
               V  D +       +  ++  G     G+  L   R + AD +   LN         
Sbjct: 139 V--RVGKDAM------HEMLLAWLGRLIPTGVAYLVVQRNLGADSLITWLN--------- 181

Query: 228 GYNQKVDVVRIFESRKLFLVNAFK 251
              Q     +    +   ++    
Sbjct: 182 --GQGFQASKYASKKGFRIIEVRP 203


>gi|297571232|ref|YP_003697006.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
 gi|296931579|gb|ADH92387.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
          Length = 210

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 10/118 (8%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +T+ S  F P    +    + L   +P  +      + D+G G G + LAL    P  +
Sbjct: 29  TVTVDSGVFSPSGLDK--GTAVLLHKVPISDLEPGSVVADIGCGWGPITLALADTYPDAR 86

Query: 124 GVGVDISCKALEIAKSNAVTNGV--------SERFDTLQSDWFSSVEGLFDVIVSNPP 173
            V  D++ +A+ +A  N    G          +    L+ +    V    DV+ SNPP
Sbjct: 87  VVACDVNERAVALASKNCSDLGFSNVQVGLADDVVAQLRDEISRGVHSGIDVLWSNPP 144


>gi|251809795|ref|ZP_04824268.1| methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|251806663|gb|EES59320.1| methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
 gi|329733017|gb|EGG69356.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU028]
          Length = 241

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + + F    +  LL            E R   +++DL +G G + L L  +S  
Sbjct: 15  GYEIIQNDEVFSFSTDALLL--------GYLTEVRKNDKVMDLCSGNGVIPLLLAAKSTQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               G++I  + + +A+ +   N +++R      D            + ++  NPPY + 
Sbjct: 67  P-IEGIEIQEQLVSMARRSFKLNDLNDRLTMHHMDLKDVYQTFQPAQYTLVTCNPPYFKM 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L          +   +     L + G   +     +   
Sbjct: 126 NQNHQHQKEAHKIARHEIMCNL----------KDCIEAARHLLKEGGRFIMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTELRHGKIE 186


>gi|168181163|ref|ZP_02615827.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226947286|ref|YP_002802377.1| hypothetical protein CLM_0103 [Clostridium botulinum A2 str. Kyoto]
 gi|182667993|gb|EDT79972.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|226844213|gb|ACO86879.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 246

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 21/169 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPR 193
             N + E+   ++ D         +E   DV+  NPPY    + I++      +   +  
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIE-KVDVVTVNPPYKTQGTGIININDKNAISRHEIC 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            +LD           +       L   G   +    ++ VD++ +    
Sbjct: 149 CTLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|227510237|ref|ZP_03940286.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227189889|gb|EEI69956.1| methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 250

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 25/172 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F    +  LL + A      ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFSFSLDAVLLAEFA------QVGSKRVKNIIDLCSGNGAVGLFLSSET-S 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   V+I  K  ++A  +   N +  +   +  D  ++         DVIV NPPY  +
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPYFVN 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +   + + ++D           I    +  L  +    V
Sbjct: 131 YETSEKNPNQYLAIARHEIKTTID----------EITKISADLLKTNAKLFV 172


>gi|227524381|ref|ZP_03954430.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
 gi|227088612|gb|EEI23924.1| methyltransferase [Lactobacillus hilgardii ATCC 8290]
          Length = 250

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 25/172 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           NV +  S+D F    +  LL + A      ++  + V  I+DL +G GAV L L  E+  
Sbjct: 18  NVSIIQSNDVFSFSLDAVLLAEFA------QVGSKRVKNIIDLCSGNGAVGLFLSSET-S 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   V+I  K  ++A  +   N +  +   +  D  ++         DVIV NPPY  +
Sbjct: 71  AQITMVEIQEKLADMAARSIQLNHLENQVHVVNDDLKNTTHYISKDSVDVIVCNPPYFVN 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +   + + ++D           I    +  L  +    V
Sbjct: 131 YETSEKNPNQYLAIARHEIKTTID----------EITKISADLLKTNAKLFV 172


>gi|148979970|ref|ZP_01815810.1| putative methyltransferase [Vibrionales bacterium SWAT-3]
 gi|145961493|gb|EDK26796.1| putative methyltransferase [Vibrionales bacterium SWAT-3]
          Length = 383

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 35/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           ++RL    + +     +   +D    + L  I +   +R I+DLG G G + +   + +P
Sbjct: 199 DIRLKNLPNVY-----SGEALDQGARYMLEHIPQDPELRHIIDLGCGNGVLSVKAGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDV-IVSNPPYIESV 178
             +   VD S  A+E A+ N   N G    F  + ++     +      ++ NPP+ +  
Sbjct: 254 QARITCVDESFMAVESARQNIKDNLGEDGNFQFIANNCLDGFKKNSTYLVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L+  G   V     +GY+  V 
Sbjct: 314 AITD----------HIAW-----------QMFCDAKHVLSNGGKLIVIGNRHLGYD--VK 350

Query: 235 VVRIFESRKLFLVN 248
           + R+F    +  + 
Sbjct: 351 LARLFGEANVETLE 364


>gi|23335469|ref|ZP_00120705.1| COG2813: 16S RNA G1207 methylase RsmC [Bifidobacterium longum
           DJO10A]
 gi|189439026|ref|YP_001954107.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A]
 gi|312132466|ref|YP_003999805.1| rsmc [Bifidobacterium longum subsp. longum BBMN68]
 gi|189427461|gb|ACD97609.1| 16S RNA G1207 methylase [Bifidobacterium longum DJO10A]
 gi|291516654|emb|CBK70270.1| 16S rRNA m(2)G 1207 methyltransferase [Bifidobacterium longum
           subsp. longum F8]
 gi|311773388|gb|ADQ02876.1| RsmC [Bifidobacterium longum subsp. longum BBMN68]
          Length = 218

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +AL++  +N
Sbjct: 42  VDLGTSVLLKHAPEPPLTGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERALDLTHAN 101

Query: 141 AVTNGVSERFDTLQSDWFS---------------SVEGLFDVIVSNPP 173
           A  NG +    T Q D  S                 +  FDVI SNPP
Sbjct: 102 AQANGHT-NIHTAQVDESSTPLPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|311070681|ref|YP_003975604.1| methyltransferase [Bacillus atrophaeus 1942]
 gi|310871198|gb|ADP34673.1| methyltransferase [Bacillus atrophaeus 1942]
          Length = 247

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S          +I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGKIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G V L LL        +GV+I  +  ++A  +   N +  +   +  D  +  E      
Sbjct: 57  GIVPL-LLSTRSKADIIGVEIQERLHDMAVRSVEFNKLQNQIKIIHDDLKNMPEELGHNK 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          L   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKQTEQNLNEHLRIARHEIHCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYQIE 190


>gi|163759168|ref|ZP_02166254.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
           phototrophica DFL-43]
 gi|162283572|gb|EDQ33857.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hoeflea
           phototrophica DFL-43]
          Length = 423

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 15/181 (8%)

Query: 35  RFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSL 90
           RF   N + RS  +   H  +G   +R F +  +  S   F   PET     +       
Sbjct: 107 RFQQNNVLSRSRANVKAHYDIGEDLYRLFLDRDMQYSCAYFPDGPETIEDAQTLKKRHIA 166

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++  +D  R+LD+G G G + L L       + VGV +S + L +A+  A   GVS+R 
Sbjct: 167 AKLCLKDGQRVLDIGCGWGGMALYLA-HVADVEVVGVTLSERQLAVARRRAEILGVSDRV 225

Query: 151 DTLQSDWFSSVEGLFDVIVSN--PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                D +  V   FD +VS     ++ +  +    L VRD   R+    G +GL+   +
Sbjct: 226 RFELID-YREVTEKFDRVVSVGMLEHVGAPHLGAYFLNVRD---RL----GPEGLALIHS 277

Query: 209 I 209
           I
Sbjct: 278 I 278


>gi|317151857|ref|YP_004119905.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
 gi|316942108|gb|ADU61159.1| methyltransferase small [Desulfovibrio aespoeensis Aspo-2]
          Length = 268

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             IL  RD             +P       +DS L     R  +  V   +DLG G G V
Sbjct: 12  QAILARRD------AFPRGMIQPEEGYRFSLDSLLLACFARPGREQVG--IDLGCGCGVV 63

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVS 170
            LALL   P  +  GVDI  +++ +A  NAV    ++R+    +D          D +V+
Sbjct: 64  GLALLLRQPDLRLTGVDIDPESVRVAGLNAVNLHYADRYAATLADVAQWRSERVVDFVVA 123

Query: 171 NPPYIESVIVDCLGLE---VRDFDPR--ISLDG 198
           NPPY           E   V  F+ R   +L  
Sbjct: 124 NPPYRPLGCGRVSQGESRAVARFESRGDFALFA 156


>gi|224585023|ref|YP_002638822.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469551|gb|ACN47381.1| hypothetical protein SPC_3296 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 378

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|300853355|ref|YP_003778339.1| putative methyltransferase [Clostridium ljungdahlii DSM 13528]
 gi|300433470|gb|ADK13237.1| predicted methyltransferase [Clostridium ljungdahlii DSM 13528]
          Length = 250

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 22/174 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +  +I  +  + I+DL +GTG V   +  ++      G++I    +++A  + 
Sbjct: 33  VDAVLLANFAKI--KPKMNIIDLCSGTGIVPFIIAGKTKAQHITGMEIQKDMVDMATRSV 90

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
           + NG+ ++ + +  D   F  ++     DV+  NPPY      +  D     +   +   
Sbjct: 91  IFNGMEKKVEFIHRDLVDFEFLKKLPKADVVTVNPPYKLKNSGITNDQYENAISRHEICC 150

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +L            +       L  +G   +    +    +V I  + + + + 
Sbjct: 151 TL----------EDVIKAAKILLKDNGKLYMIHRPD---RLVDIMYTMRKYNIE 191


>gi|239929819|ref|ZP_04686772.1| rRNA or tRNA methyltransferase [Streptomyces ghanaensis ATCC 14672]
 gi|291438151|ref|ZP_06577541.1| transferase [Streptomyces ghanaensis ATCC 14672]
 gi|291341046|gb|EFE68002.1| transferase [Streptomyces ghanaensis ATCC 14672]
          Length = 506

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LDLGTG+G    AL       +    D++ +AL I       +G     +  +
Sbjct: 163 RRPVSSALDLGTGSGIQ--ALHATRHATRVTATDVNPRALHITALTLALSGAPA-AELRE 219

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F+ V  +  +D+IVSNPP++ S                   DGG+ G    RT+   
Sbjct: 220 GSLFTPVRDDETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQE 268

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               L++ G       +    
Sbjct: 269 AGERLSEGGFAQFLANWQHVE 289


>gi|261367267|ref|ZP_05980150.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile
           DSM 15176]
 gi|282570869|gb|EFB76404.1| ribosomal protein L11 methyltransferase [Subdoligranulum variabile
           DSM 15176]
          Length = 306

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 72/206 (34%), Gaps = 35/206 (16%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------------WRD 59
             +       VIV      D+     L       LK+  I   L             W+ 
Sbjct: 53  QELLDKPRDIVIVHMYLAPDENPAEILP-LFEERLKNSGIEYQLNTTGVEQEDWQNAWKK 111

Query: 60  FYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEK------------RDVVRI 101
           +Y+     +     P  E        + +D  +AF     E             +   R+
Sbjct: 112 YYHPMDIGNRLAIVPGWEKYDTDRIAITMDPGMAFGTGTHETTSLCLETLDAIVKGGERV 171

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTG+G + +A LK        GVDI    +  A  NA  NGV++RF  L  D     
Sbjct: 172 LDIGTGSGILAIAALKLGAKV-AEGVDIDPMCVRTAGENAERNGVADRFTVLVGDLSDKA 230

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEV 187
            G +++I +N   I +  +  L   V
Sbjct: 231 SGQYNIITAN---IVASAILSLAPHV 253


>gi|218708712|ref|YP_002416333.1| putative ribosomal RNA small subunit methyltransferase D [Vibrio
           splendidus LGP32]
 gi|254807100|sp|B7VKD0|RLMG_VIBSL RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|218321731|emb|CAV17685.1| putative ribosomal RNA small subunit methyltransferase D [Vibrio
           splendidus LGP32]
          Length = 383

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 35/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           ++RL    + +     +   +D    + L  I +   +R I+DLG G G + +   + +P
Sbjct: 199 DIRLKNLPNVY-----SGEALDQGARYMLEHIPQDPELRHIIDLGCGNGVLSVKAGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDV-IVSNPPYIESV 178
             +   VD S  A+E A+ N   N G    F  + ++     +      ++ NPP+ +  
Sbjct: 254 QARITCVDESFMAVESARQNIKDNLGEEGNFQFIANNCLDGFKKNSTYLVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L+  G   V     +GY+  V 
Sbjct: 314 AITD----------HIAW-----------QMFCDAKHVLSNGGKLIVIGNRHLGYD--VK 350

Query: 235 VVRIFESRKLFLVN 248
           + R+F    +  + 
Sbjct: 351 LARLFGEANVETLE 364


>gi|86145673|ref|ZP_01064003.1| putative methyltransferase [Vibrio sp. MED222]
 gi|85836644|gb|EAQ54770.1| putative methyltransferase [Vibrio sp. MED222]
          Length = 383

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 35/194 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           ++RL    + +     +   +D    + L  I +   +R I+DLG G G + +   + +P
Sbjct: 199 DIRLKNLPNVY-----SGEALDQGARYMLEHIPQDPELRHIIDLGCGNGVLSVKAGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGLFDV-IVSNPPYIESV 178
             +   VD S  A+E A+ N   N G    F  + ++     +      ++ NPP+ +  
Sbjct: 254 QARITCVDESFMAVESARQNIKDNLGEEGNFQFIANNCLDGFKKNSTYLVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L+  G   V     +GY+  V 
Sbjct: 314 AITD----------HIAW-----------QMFCDAKHVLSNGGKLIVIGNRHLGYD--VK 350

Query: 235 VVRIFESRKLFLVN 248
           + R+F    +  + 
Sbjct: 351 LARLFGEANVETLE 364


>gi|148378068|ref|YP_001252609.1| hypothetical protein CBO0060 [Clostridium botulinum A str. ATCC
           3502]
 gi|153931253|ref|YP_001382467.1| hypothetical protein CLB_0096 [Clostridium botulinum A str. ATCC
           19397]
 gi|153935508|ref|YP_001386019.1| hypothetical protein CLC_0108 [Clostridium botulinum A str. Hall]
 gi|148287552|emb|CAL81616.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927297|gb|ABS32797.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152931422|gb|ABS36921.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 246

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 21/169 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPR 193
             N + E+   ++ D         +E   DV+  NPPY    + I++      +   +  
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIE-KVDVVTVNPPYKTQGTGIININDKNAISRHEIC 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            +LD           +       L   G   +    ++ VD++ +    
Sbjct: 149 CTLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|301155360|emb|CBW14826.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Haemophilus parainfluenzae T3T1]
          Length = 215

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 20/153 (13%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  D   ILD+GTGTG V L L + S    K   V++   A + A+ N   +    R 
Sbjct: 13  WADVSDCQHILDMGTGTGLVALMLAQRSHEHCKIEAVELDPLAAQQAQENFKASPWHNRL 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD---GGIDGLS 204
              + D   +       FD+IV+NPPY    +      E ++ +  ++       +D L 
Sbjct: 73  HLTRQDVQTYCLQTAHQFDLIVANPPYFAQGV------ECKNDERALARYVQQSHLDWL- 125

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                 +  +  L++ G  S  + Y     ++ 
Sbjct: 126 ------NWAASCLSEKGKISFVLPYEAGKTLIN 152


>gi|257885352|ref|ZP_05665005.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|261209234|ref|ZP_05923626.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289565983|ref|ZP_06446421.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|293553052|ref|ZP_06673694.1| DNA methyltransferase signature protein [Enterococcus faecium
           E1039]
 gi|294616213|ref|ZP_06696010.1| methyltransferase [Enterococcus faecium E1636]
 gi|257821208|gb|EEV48338.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|260076780|gb|EEW64515.1| conserved hypothetical protein [Enterococcus faecium TC 6]
 gi|289162181|gb|EFD10043.1| conserved hypothetical protein [Enterococcus faecium D344SRF]
 gi|291590968|gb|EFF22680.1| methyltransferase [Enterococcus faecium E1636]
 gi|291602761|gb|EFF32971.1| DNA methyltransferase signature protein [Enterococcus faecium
           E1039]
          Length = 244

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 78/189 (41%), Gaps = 27/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F         +D+ L     R+ K+   +I+DL  G GAV L L K +  
Sbjct: 15  DIKIIQSSKVFSFS------LDAVLLAHFSRVPKKG--KIVDLCAGNGAVGLFLSKRT-Q 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N ++E+      D   S+        D++V NPPY + 
Sbjct: 66  AAIDAIELQPRLADMARRSIALNHLNEQMTVHTIDLKDSLSVVRHNSCDLVVCNPPYFKG 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +  +         +   +   +L            + D  S+ L  +G  ++    ++ +
Sbjct: 126 LPTNKTNPNKHLAIARHEIHTTL----------EEVIDISSKLLKTNGRFTMVHRPDRFL 175

Query: 234 DVVRIFESR 242
           +++++ +  
Sbjct: 176 EIIQVMQDY 184


>gi|194446650|ref|YP_002042487.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|229564345|sp|B4T690|RLMG_SALNS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|194405313|gb|ACF65535.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 378

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|27469214|ref|NP_765851.1| hypothetical protein SE2296 [Staphylococcus epidermidis ATCC 12228]
 gi|57866024|ref|YP_187721.1| hypothetical protein SERP0125 [Staphylococcus epidermidis RP62A]
 gi|293366129|ref|ZP_06612816.1| methyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27316763|gb|AAO05938.1|AE016751_233 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57636682|gb|AAW53470.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|291319723|gb|EFE60082.1| methyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329737907|gb|EGG74135.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU045]
          Length = 241

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + + F    +  LL            E R   +++DL +G G + L L  +S  
Sbjct: 15  GYEIIQNDEVFSFSTDALLL--------GYLTEVRKNDKVMDLCSGNGVIPLLLAAKSTQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               G++I  + + +A+ +   N +++R      D            + ++  NPPY + 
Sbjct: 67  P-IEGIEIQEQLVSMARRSFKLNDLNDRLTMHHMDLKDVYQTFQPAQYTLVTCNPPYFKM 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L          +   +     L + G   +     +   
Sbjct: 126 NQNHQHQKEAHKIARHEIMCNL----------KDCIEAARHLLKEGGRFIMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTELRHGKIE 186


>gi|301301181|ref|ZP_07207337.1| ribosomal protein L11 methyltransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851180|gb|EFK78908.1| ribosomal protein L11 methyltransferase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 274

 Score = 72.8 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 54/220 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       + +  S + ++   E E+L+               + LA        
Sbjct: 71  WKKYYHPVRLTKYLTIVPSWEEYQKEQEDEILIRLDPGRAFGTGTHPTTQLALQALETSV 130

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  +     K    DI   A+  AK N   N +S   +   +
Sbjct: 131 RGNESMIDVGTGSGVLSIA-ARHFGVDKVYAYDIDDNAVTAAKENFALNPISNNIEVKPN 189

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    +    D+IV+N                      ++             +      
Sbjct: 190 NLLEGIHKNVDIIVAN---------------------ILA--------EIIVPLIPQAKS 220

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF--KD 252
           +L   G+     I  ++K  ++   E     +      KD
Sbjct: 221 NLKDGGIFITSGIINDKKELILTELEQNGFVVDEILNKKD 260


>gi|322689524|ref|YP_004209258.1| hypothetical protein BLIF_1341 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|322691481|ref|YP_004221051.1| hypothetical protein BLLJ_1292 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320456337|dbj|BAJ66959.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|320460860|dbj|BAJ71480.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 200

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +A+++  +N
Sbjct: 24  VDLGTSVLLKHAPEPPLTGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHAN 83

Query: 141 AVTNGVSERFDTLQSDWFS---------------SVEGLFDVIVSNPP 173
           A  NG +    T Q D  S                 +  FDVI SNPP
Sbjct: 84  AQANGHT-NIHTAQVDESSTPLPAENQPAFCETVPSDLTFDVIWSNPP 130


>gi|253752261|ref|YP_003025402.1| methyltransferase [Streptococcus suis SC84]
 gi|253754087|ref|YP_003027228.1| methyltransferase [Streptococcus suis P1/7]
 gi|253756021|ref|YP_003029161.1| methyltransferase [Streptococcus suis BM407]
 gi|251816550|emb|CAZ52186.1| putative methyltransferase [Streptococcus suis SC84]
 gi|251818485|emb|CAZ56314.1| putative methyltransferase [Streptococcus suis BM407]
 gi|251820333|emb|CAR46874.1| putative methyltransferase [Streptococcus suis P1/7]
 gi|319758651|gb|ADV70593.1| putative methyltransferase [Streptococcus suis JS14]
          Length = 249

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 20/188 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +      + R      +DS L    P++  +  + I+DL +G GAV L         + 
Sbjct: 16  FSTDVQIIQNREVFSYSIDSVLLSRFPKMPAQKGL-IVDLCSGNGAVGL-FASTRTKAQI 73

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
           + V++  +   + + +   NG+ ++   +  D  +     +    D+++ NPPY +    
Sbjct: 74  IQVELQERLANMNRRSIALNGLEDQVSVINDDLANLPQYDLRSKVDLMLCNPPYFKVDKE 133

Query: 181 DCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             L       +   +   +LD           I     + L  +G  ++    ++ +D++
Sbjct: 134 SNLNESEHYLLARHEIATNLDS----------ICQVAQQVLKSNGRLAMVHRPDRFLDIL 183

Query: 237 RIFESRKL 244
               + KL
Sbjct: 184 DTLRTYKL 191


>gi|254977171|ref|ZP_05273643.1| hypothetical protein CdifQC_17743 [Clostridium difficile QCD-66c26]
 gi|255094501|ref|ZP_05323979.1| hypothetical protein CdifC_17856 [Clostridium difficile CIP 107932]
 gi|255316252|ref|ZP_05357835.1| hypothetical protein CdifQCD-7_17939 [Clostridium difficile
           QCD-76w55]
 gi|255518913|ref|ZP_05386589.1| hypothetical protein CdifQCD-_17478 [Clostridium difficile
           QCD-97b34]
 gi|255652092|ref|ZP_05398994.1| hypothetical protein CdifQCD_18040 [Clostridium difficile
           QCD-37x79]
 gi|260685065|ref|YP_003216350.1| hypothetical protein CD196_3336 [Clostridium difficile CD196]
 gi|260688723|ref|YP_003219857.1| hypothetical protein CDR20291_3382 [Clostridium difficile R20291]
 gi|306521826|ref|ZP_07408173.1| hypothetical protein CdifQ_20455 [Clostridium difficile QCD-32g58]
 gi|260211228|emb|CBA66742.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260214740|emb|CBE07425.1| conserved hypothetical protein [Clostridium difficile R20291]
          Length = 248

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 20/170 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSI 87

Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRI 194
             NG+ ER + +  D         + G + V+ SNPPY  I+ +        +   + R 
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDING-YHVVTSNPPYMHIDGIKNPNDKKAISRHEVRC 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L            +    SR +   G   +     + VD++ +    KL
Sbjct: 147 NL----------EDVIRASSRLVMPRGKFFMIHRPTRLVDIITLGRKYKL 186


>gi|300214540|gb|ADJ78956.1| Ribosomal protein L11 methyltransferase [Lactobacillus salivarius
           CECT 5713]
          Length = 296

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 54/220 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       + +  S + ++   E E+L+               + LA        
Sbjct: 93  WKKYYHPVRLTKYLTIVPSWEEYQKEQEDEILIRLDPGRAFGTGTHPTTQLALQALETSV 152

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  +     K    DI   A+  AK N   N +S   +   +
Sbjct: 153 RGNESMIDVGTGSGVLSIA-ARHFGVDKVYAYDIDDNAVTAAKENFALNPISNNIEVKPN 211

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    +    D+IV+N                      ++             +      
Sbjct: 212 NLLEGIHKNVDIIVAN---------------------ILA--------EIIVPLIPQAKS 242

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF--KD 252
           +L   G+     I  ++K  ++   E     +      KD
Sbjct: 243 NLKDGGIFITSGIINDKKELILTELEQNGFVVDEILNKKD 282


>gi|191174002|ref|ZP_03035519.1| putative methyltransferase [Escherichia coli F11]
 gi|190905693|gb|EDV65315.1| putative methyltransferase [Escherichia coli F11]
 gi|323955811|gb|EGB51569.1| hypothetical protein ERLG_03075 [Escherichia coli H263]
          Length = 257

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 51  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 110

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 111 NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 161 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 219

Query: 262 F 262
            
Sbjct: 220 A 220


>gi|170718455|ref|YP_001783671.1| methyltransferase small [Haemophilus somnus 2336]
 gi|262828510|sp|B0UWL8|TRMN6_HAES2 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|168826584|gb|ACA31955.1| methyltransferase small [Haemophilus somnus 2336]
          Length = 236

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                    +LDLGTGTG + L L + SP   +   V++   A   AK N   +  + + 
Sbjct: 33  WANINQANTLLDLGTGTGLIALMLAQRSPEHCQISAVELDQLAYLQAKDNIQQSPWANKI 92

Query: 151 DTLQSDW---FSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLD-GGIDGLSH 205
              Q D        E  FDVI +NPPY +           +  +    +L    +D L  
Sbjct: 93  KIFQQDIIVFAQDCEHKFDVITANPPYFKQGVDCASKQRNLARY----TLTQSHLDWL-- 146

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                +   + LN  G   + + + +   + +      LF +   K
Sbjct: 147 -----NAAEKLLNLTGEIHLILPFEEGKSLQK---KCGLFCIRECK 184


>gi|312871364|ref|ZP_07731460.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 3008A-a]
 gi|312872477|ref|ZP_07732546.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311092059|gb|EFQ50434.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF
           2062A-h1]
 gi|311093116|gb|EFQ51464.1| GIY-YIG catalytic domain protein [Lactobacillus iners LEAF 3008A-a]
          Length = 342

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    A+ +   N +  R +    +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAERSVSLNKLENRIEVHCMNALDTPNVLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 SDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKLFIVH 173


>gi|218547897|ref|YP_002381688.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           fergusonii ATCC 35469]
 gi|262828282|sp|B7LUY9|TRMN6_ESCF3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218355438|emb|CAQ88047.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia fergusonii ATCC 35469]
 gi|323978395|gb|EGB73480.1| gyfiC [Escherichia coli TW10509]
 gi|324113102|gb|EGC07078.1| hypothetical protein ERIG_02707 [Escherichia fergusonii B253]
          Length = 245

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NIYPADIQQWITQQTARFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++    +  + ++G   V +          +       L     D   N+     RVLL
Sbjct: 149 QSLLTCAAECITEEGFFCVVLPEQIGNGFTELALRMGWHL-RLRTDVAENETRQPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|117921771|ref|YP_870963.1| methyltransferase small [Shewanella sp. ANA-3]
 gi|262828713|sp|A0L0I8|TRMN6_SHESA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|117614103|gb|ABK49557.1| methyltransferase small [Shewanella sp. ANA-3]
          Length = 241

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 15/165 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G G+G + L +  +    +   V++  KA    + N   +  ++R  
Sbjct: 29  WAPLSRAKHILDIGAGSGLLSL-MAAQRSQGQITAVELEEKAAAACQYNMTQSPWADRCK 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D       +  +  FD I+ NPPY E              +   ++    D L   
Sbjct: 88  LIHGDIQHVCQQAEYQEYFDHIICNPPYFEHGPKAN--------EQHRAMARHTDTLGFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             + + +S+ L+ +G  S+ +               +L+LV   +
Sbjct: 140 -PLLEAISQCLSHEGHASLILPIQSLTRFKACLHQTQLYLVKEVR 183


>gi|257463117|ref|ZP_05627518.1| methyltransferase [Fusobacterium sp. D12]
          Length = 250

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   +D F    ++ L+ +            +    ILDLGTG  A+ L L  ++  
Sbjct: 13  GLKIIQRNDCFHFSLDSLLISEFIKI-------NKRSKTILDLGTGNAAIPLFLSLKT-T 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE- 176
            +  G++I   + E+A  N   N + E+   L  D  +      +  FD++VSNPP+ E 
Sbjct: 65  AQIYGLEIQQISYELAIKNIALNHLEEQVHILHGDMKNWECFFSKNSFDIVVSNPPFFEF 124

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               S++ D   L +   +  I+L            +    S  + + G   +    ++ 
Sbjct: 125 HGNKSLLNDLEQLTLARHEISITL----------EELIQISSILVKEHGYFYLVHRADRL 174

Query: 233 VDVVRIFESRKL 244
            D++ +    KL
Sbjct: 175 ADILELCRKYKL 186


>gi|88860257|ref|ZP_01134895.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2]
 gi|88817455|gb|EAR27272.1| hypothetical protein PTD2_14572 [Pseudoalteromonas tunicata D2]
          Length = 230

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + +    +LD+G G+G + L L + SPF     ++I  KA   AKSN   +   +   
Sbjct: 29  WADVQSAQSVLDIGAGSGLISLMLKQRSPFISITAIEIDAKAALQAKSNIAHSQWPD-IK 87

Query: 152 TLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            ++ D  +      FD++VSNPP+ +  +      E R+
Sbjct: 88  VIEHDILTYTSAQPFDLVVSNPPFFQRSLKG--PNEARN 124


>gi|120600037|ref|YP_964611.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. W3-18-1]
 gi|120560130|gb|ABM26057.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. W3-18-1]
          Length = 405

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 245 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 304

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 305 RNQLPTDKGHFYWDDCMTHLPDDVQPDLVLCNPPFHQGEAITD----------HIAW--- 351

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L + G+  + +G       V + R+F++ 
Sbjct: 352 --------QMFLDARRRLKEGGILHI-VGNRHLAYHVKLQRLFKNC 388


>gi|317060713|ref|ZP_07925198.1| methyltransferase [Fusobacterium sp. D12]
 gi|313686389|gb|EFS23224.1| methyltransferase [Fusobacterium sp. D12]
          Length = 242

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   +D F    ++ L+ +            +    ILDLGTG  A+ L L  ++  
Sbjct: 5   GLKIIQRNDCFHFSLDSLLISEFIKI-------NKRSKTILDLGTGNAAIPLFLSLKT-T 56

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE- 176
            +  G++I   + E+A  N   N + E+   L  D  +      +  FD++VSNPP+ E 
Sbjct: 57  AQIYGLEIQQISYELAIKNIALNHLEEQVHILHGDMKNWECFFSKNSFDIVVSNPPFFEF 116

Query: 177 ----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               S++ D   L +   +  I+L            +    S  + + G   +    ++ 
Sbjct: 117 HGNKSLLNDLEQLTLARHEISITL----------EELIQISSILVKEHGYFYLVHRADRL 166

Query: 233 VDVVRIFESRKL 244
            D++ +    KL
Sbjct: 167 ADILELCRKYKL 178


>gi|291166621|gb|EFE28667.1| SAM-dependent methyltransferase [Filifactor alocis ATCC 35896]
          Length = 253

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 24/189 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   ++ F    +  LL           I+ R      DLGTGTG + + +L +S  
Sbjct: 21  GLKIIQQTNGFCFGMDAVLL--------SNFIKVRPNFVGADLGTGTGIIPILILGKSNL 72

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            K    +I  +  ++A+ + + NG+ +R   + SD   +     +   D +VSNPPY+++
Sbjct: 73  KKIYAFEIQEEVADMAQRSVLLNGLEDRATVICSDLKLANRHIEKCSLDFVVSNPPYMKT 132

Query: 178 VIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
             +  L    ++   + + SL            I       L   G+  +    N+  D+
Sbjct: 133 DGLQNLNEKKKISRHEVKCSL----------EDIFVTAENLLKVSGVFYMVHRPNRLCDI 182

Query: 236 VRIFESRKL 244
             +    +L
Sbjct: 183 FELCRKYRL 191


>gi|62181737|ref|YP_218154.1| hypothetical protein SC3167 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|197248542|ref|YP_002148150.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|75480702|sp|Q57JN9|RLMG_SALCH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564339|sp|B5F6B6|RLMG_SALA4 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|62129370|gb|AAX67073.1| paral putative methyltransferase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|197212245|gb|ACH49642.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|322716223|gb|EFZ07794.1| Ribosomal RNA large subunit methyltransferase G [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 378

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P  K V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQAKVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|293406017|ref|ZP_06650009.1| O-methyltransferase [Escherichia coli FVEC1412]
 gi|298381817|ref|ZP_06991416.1| yfiC protein [Escherichia coli FVEC1302]
 gi|291428225|gb|EFF01252.1| O-methyltransferase [Escherichia coli FVEC1412]
 gi|298279259|gb|EFI20773.1| yfiC protein [Escherichia coli FVEC1302]
          Length = 257

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 51  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 110

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 111 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 161 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 219

Query: 262 F 262
            
Sbjct: 220 A 220


>gi|288904868|ref|YP_003430090.1| hypothetical protein GALLO_0657 [Streptococcus gallolyticus UCN34]
 gi|288731594|emb|CBI13149.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
          Length = 257

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY--I 175
              + V++  +   +A+ +   N +  +   +  D  + +  +     D+I+ NPPY  +
Sbjct: 70  APIIEVELQERLANMAERSIQLNQLENQVQMINDDLKNLLNHVPRSGVDLILCNPPYFKV 129

Query: 176 ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I +     L  +G  ++    ++ +
Sbjct: 130 SETSKKNLSEHYLLARHEIATNL----------EEICEVARHALKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|262191798|ref|ZP_06049970.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93]
 gi|262032332|gb|EEY50898.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae CT 5369-93]
          Length = 340

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|227495842|ref|ZP_03926153.1| possible 16S rRNA methyltransferase [Actinomyces urogenitalis DSM
           15434]
 gi|226834599|gb|EEH66982.1| possible 16S rRNA methyltransferase [Actinomyces urogenitalis DSM
           15434]
          Length = 202

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 47/189 (24%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+D          +  +    LDLG G G + LAL   +P    +  D++ ++LE+ 
Sbjct: 46  TQVLLDHV-------PDPPETGTFLDLGCGWGPITLALADAAPQAHVLAADVNERSLELT 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             NA   G  +       +  + +       D+I SNPP             VR      
Sbjct: 99  ARNAAAAGHHQVRAVQAEELLAELRETGQRLDLIWSNPP-------------VRI----- 140

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------------YNQKVDVVRIFESR 242
                  G      +       L +DG   + +G             +Q   V +   S+
Sbjct: 141 -------GKEALHELLGTWLGLLAEDGEAWLVVGKNLGADSLARWMADQGYTVSKEASSK 193

Query: 243 KLFLVNAFK 251
              ++   +
Sbjct: 194 GFRVLRVRR 202


>gi|315268875|gb|ADT95728.1| methyltransferase small [Shewanella baltica OS678]
          Length = 381

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 221 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 280

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 281 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 327

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 328 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 364


>gi|240144623|ref|ZP_04743224.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82]
 gi|257203339|gb|EEV01624.1| SAM-dependent methyltransferase [Roseburia intestinalis L1-82]
 gi|291540315|emb|CBL13426.1| Predicted O-methyltransferase [Roseburia intestinalis XB6B4]
          Length = 246

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     + +K +  R+LDLGTGTG + + +  ++       ++I  ++ ++A+ + 
Sbjct: 33  MDAVLLSGFAKAKKGE--RVLDLGTGTGIIPILMEAKTEAEDFKALEIQEESADMARRSV 90

Query: 142 VTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + ++ + +  D    S++ G   FDVI +NPPY+              +   +   
Sbjct: 91  CYNHLEDKIEIVTGDIKEASAIFGASSFDVITTNPPYMIGTHGQNSPSAAKAIARHEVLC 150

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +LD           I    ++ L   G   +  
Sbjct: 151 TLD----------DILRETAKMLVPGGRFYMVH 173


>gi|126652964|ref|ZP_01725106.1| YabB [Bacillus sp. B14905]
 gi|126590294|gb|EAZ84416.1| YabB [Bacillus sp. B14905]
          Length = 249

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      I       I+DL +G 
Sbjct: 9   ERLDYLLAE----NLRIIQSPSVFSFS------LDAVLLSKFVSIPSHKG-SIVDLCSGN 57

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L L       +  GV++  + L++A+ +   N +  +   +  D     +      
Sbjct: 58  GVIPLFL-SARTRAQITGVELQPRLLDMAERSVRYNQLENQIQMILGDVKEIPKQLGIEK 116

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY  +             +   +  ++L                 S+ L + 
Sbjct: 117 YDVVTCNPPYFLAHEASDKNLSEHHAIARHELYLTL----------EEAIQSASKLLKQG 166

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D+V    + +L
Sbjct: 167 GKAAFVHRPGRLLDIVTAMRANRL 190


>gi|26248940|ref|NP_754980.1| hypothetical protein c3099 [Escherichia coli CFT073]
 gi|91211902|ref|YP_541888.1| hypothetical protein UTI89_C2897 [Escherichia coli UTI89]
 gi|117624796|ref|YP_853709.1| hypothetical protein APECO1_3956 [Escherichia coli APEC O1]
 gi|237705085|ref|ZP_04535566.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331648322|ref|ZP_08349411.1| hypothetical protein ECIG_05212 [Escherichia coli M605]
 gi|26109346|gb|AAN81548.1|AE016764_230 Hypothetical protein yfiC [Escherichia coli CFT073]
 gi|91073476|gb|ABE08357.1| hypothetical protein YfiC [Escherichia coli UTI89]
 gi|115513920|gb|ABJ01995.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226901451|gb|EEH87710.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|331042871|gb|EGI15012.1| hypothetical protein ECIG_05212 [Escherichia coli M605]
          Length = 285

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|304410481|ref|ZP_07392099.1| methyltransferase small [Shewanella baltica OS183]
 gi|307304573|ref|ZP_07584323.1| methyltransferase small [Shewanella baltica BA175]
 gi|304350965|gb|EFM15365.1| methyltransferase small [Shewanella baltica OS183]
 gi|306911975|gb|EFN42399.1| methyltransferase small [Shewanella baltica BA175]
          Length = 377

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|68075837|ref|XP_679838.1| methyl transferase-like protein [Plasmodium berghei strain ANKA]
 gi|56500670|emb|CAI04376.1| methyl transferase-like protein, putative [Plasmodium berghei]
          Length = 227

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 24/181 (13%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--- 109
            I   ++       L S  + P  +T +  + AL   +  I   +V  +L++GTG+G   
Sbjct: 13  YIYNNKE-------LKSKLYLPSSDTFVFAE-ALEDDVEAISP-NVNMVLEMGTGSGYLI 63

Query: 110 --AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLF 165
                L L K         +DI+  A      NA++       + + S+ F+++   G F
Sbjct: 64  LFLYELLLKKNKKIDLLYCIDINRDACNC-VQNAISLNGISNVEIINSNLFNNLRTCGQF 122

Query: 166 DVIVSNPPYIESVIVDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           D+I+ NPPY+E+   +    + V  +       GG  G          V  HL+ +G+  
Sbjct: 123 DIILFNPPYVETEQDELNKTDIVASY------AGGKQGREVILKFLHTVYDHLSNNGILY 176

Query: 225 V 225
           +
Sbjct: 177 L 177


>gi|328881226|emb|CCA54465.1| Ribosomal RNA small subunit methyltransferase C [Streptomyces
           venezuelae ATCC 10712]
          Length = 387

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 27/151 (17%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDW 157
            R+ DLG G G V LA+    P  + V  D S +A+  A+ N  T+ G   + + L  D 
Sbjct: 243 ARVADLGCGNGVVGLAIALHEPDAELVFTDESYQAVASAEENFRTHVGDGRKAEFLVGDG 302

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + + +G  D++++NPP+                  R +           R +     R 
Sbjct: 303 LADLPDGSVDLVLNNPPFHSHQATTD----------RTA-----------RRMFTDARRA 341

Query: 217 LNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
           L   G   V IG       V + RIF + +L
Sbjct: 342 LRPGGELWV-IGNRHLGYHVTLRRIFGNSEL 371


>gi|229550582|ref|ZP_04439307.1| methyltransferase [Enterococcus faecalis ATCC 29200]
 gi|229304301|gb|EEN70297.1| methyltransferase [Enterococcus faecalis ATCC 29200]
          Length = 202

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 72/216 (33%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    +     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-KNLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|160876675|ref|YP_001555991.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
 gi|229470402|sp|A9L0V0|RLMG_SHEB9 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|160862197|gb|ABX50731.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
          Length = 378

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|306814361|ref|ZP_07448523.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|222034280|emb|CAP77021.1| Uncharacterized protein yfiC [Escherichia coli LF82]
 gi|305851755|gb|EFM52207.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli NC101]
 gi|312947147|gb|ADR27974.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O83:H1 str. NRG 857C]
          Length = 245

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATSQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|329723958|gb|EGG60483.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU144]
          Length = 241

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + + F    +  LL            E R   +++DL +G G + L L  +S  
Sbjct: 15  GYEIIQNDEVFSFSTDALLL--------GYLTEVRKNDKVMDLCSGNGVIPLLLAAKSTQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               G++I  + + +A+ +   N +++R      D            + ++  NPPY + 
Sbjct: 67  P-IEGIEIQEQLVSMARRSFKLNDLNDRLTMHHMDLKDVYQTFQPAQYTLVTCNPPYFKM 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L          +   +     L + G   +     +   
Sbjct: 126 NQNHQHQKEAHKIARHEIMCNL----------KDCIEAARHLLKEGGRFIMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTELRHGKIE 186


>gi|220936044|ref|YP_002514943.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997354|gb|ACL73956.1| methyltransferase small [Thioalkalivibrio sp. HL-EbGR7]
          Length = 195

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 30/163 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +    +   F PR      +D+     L  +E  +    LDLG G G + L L + +P  
Sbjct: 25  LTFHTTWGLFSPRG-----IDAGTRLLLDHVEVGEADDCLDLGCGYGPIGLTLARLAPKG 79

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   VD    A++ +  NA  NG+      L + + +     F VI SN P      +  
Sbjct: 80  RTCLVDKDFVAVDYSNKNARINGIGNAEAFLSNGFSAVGNRRFQVITSNLPAKVGKEM-- 137

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                               L  Y         HL+  G   V
Sbjct: 138 --------------------LYLY---LYDAFEHLHPGGRLYV 157


>gi|42519373|ref|NP_965303.1| hypothetical protein LJ1501 [Lactobacillus johnsonii NCC 533]
 gi|41583661|gb|AAS09269.1| hypothetical protein LJ_1501 [Lactobacillus johnsonii NCC 533]
          Length = 340

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL          + +  D  +++DL +G GA  + L      
Sbjct: 17  DLQIIQEKDAFSFSLDTLLL------GYFAQNKIHDNYKVVDLCSGNGAASIYL-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +  + A+ +   N +  R +    +   +     +  +DV+V NPPY + 
Sbjct: 70  AHYDAVEIQKEIADQARRSIKLNKLENRIEVHCLNALDAPKKLGKDKYDVVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHIVNPDEKK-----ALARHE--LAINLEQIIKVSSDLLKMKGKMFMVH 173


>gi|332158532|ref|YP_004423811.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2]
 gi|331033995|gb|AEC51807.1| hypothetical protein PNA2_0891 [Pyrococcus sp. NA2]
          Length = 396

 Score = 72.8 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 74/226 (32%), Gaps = 39/226 (17%)

Query: 16  GLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRI----LGWRDFYNV------R 64
           G+   ++ V      ++            RS + E +  I    LG   +  +      +
Sbjct: 129 GMERFKLDVAEAIMEVEPEIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIEEGRAK 188

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +         +T   +D            R   R+LD+ T TG   +         + 
Sbjct: 189 FIVDMR----GQKTGFFLDQRENRLALEKWVRPGDRVLDVFTYTGGFAIHAAIAGAE-EV 243

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESV 178
           +G+D S KA+E AK NA  NGV +R + +  + F  +E        FD+++ +PP     
Sbjct: 244 IGIDKSPKAIETAKENAKLNGVEDRVNFMVGNAFEEMEKLQKRGEKFDIVILDPPAFVQH 303

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
             D                    GL  Y  +       L   G+  
Sbjct: 304 EKDL-----------------KAGLRAYFNVNFAALNLLKDGGILV 332


>gi|300024372|ref|YP_003756983.1| methyltransferase small [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526193|gb|ADJ24662.1| methyltransferase small [Hyphomicrobium denitrificans ATCC 51888]
          Length = 266

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +PR       D+ L  S+   E   +  +LD+G G G + L + +  P  + V ++  
Sbjct: 26  VLQPRNGYRAGTDAVLLASILTPETLGLGAVLDVGAGVGVIGLCVARRCPSARAVLLERD 85

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDVIVSNPPYIES--VI 179
                +A+ N   N ++ R   +++D   +             F V+++NPPY +     
Sbjct: 86  PVLAALARDNVQRNELTGRVSVVETDLARATAALEAAEIKSESFPVVLANPPYHDDRRST 145

Query: 180 VDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
           +    L+      P        D L  +        R     G  ++     +   + RI
Sbjct: 146 LAESPLKAVSHQMP-------DDLLDVWARFM---CRMAAPGGRVAMIH---KADALSRI 192

Query: 239 FE 240
            E
Sbjct: 193 LE 194


>gi|153001953|ref|YP_001367634.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
 gi|229470401|sp|A6WRY2|RLMG_SHEB8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|151366571|gb|ABS09571.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
          Length = 378

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|71653639|ref|XP_815454.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70880509|gb|EAN93603.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 272

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 74/217 (34%), Gaps = 43/217 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK------ 117
                   +EP  +T LL+++ L      +      R L++G G+G V   L        
Sbjct: 13  DPRFRRSVYEPEADTFLLLET-LDRDADMLRSMQPRRCLEIGCGSGTVITHLQLVLSGIS 71

Query: 118 --------------ESPFFKGVGVDISCKALE---IAKSNAVTNGVSE---RFDTLQSDW 157
                          +   +   VDI+  ALE   +  SN +     +          D 
Sbjct: 72  GNTNNTKEVRHVSGRTWQSEFHAVDINPVALEATGVTWSNTLRRLWGDEAPHLHLHHGDL 131

Query: 158 FSSVE------------GLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLS 204
           F   +            G FDVI+ NPPY+ +  +D L    +  D    +  GG  G  
Sbjct: 132 FGPFQHEGAEGPQEAGAGEFDVILFNPPYVPTT-MDELEGAGKQGDFITAAWCGGPRGRV 190

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                   + R L+  G+C + +   Q  DV  + E 
Sbjct: 191 LVDRFILCLPRFLSARGVCYI-VAIAQ-NDVPELMEK 225


>gi|309775480|ref|ZP_07670482.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916776|gb|EFP62514.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 220

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 21/172 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+AL      ++K +  R+LD+GT  GA+ LA  +  P     GVDI  +A+++A  N  
Sbjct: 28  DTALLAQFMTVKKGE--RVLDIGTNNGALLLAAQRYEPK-HMYGVDIQKEAIQVADMNMR 84

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL----GLEVRDFDPRISLDG 198
            + ++     L +    +     DVIV NPPY +      L     L++   +  ++LD 
Sbjct: 85  HHNIT-NVTLLTASIHDAQLEKMDVIVCNPPYFKVHETSNLNESQSLQMARHERFLTLD- 142

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                    T+   V   L++ G   +     +   +  I  + K + +   
Sbjct: 143 ---------TLCRRVQELLDEKGRFYMVH---RASRIAEIAYTLKQYRLEIR 182


>gi|119487934|ref|ZP_01621431.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106]
 gi|119455510|gb|EAW36648.1| hypothetical protein L8106_28761 [Lyngbya sp. PCC 8106]
          Length = 239

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 15/158 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             +  +   ILD+GTGTG V L L + S   +   V+I   +   AK N   +   ER  
Sbjct: 35  WTDFTNTQTILDIGTGTGLVALMLAQRS-TAQIDAVEIDECSCIQAKENIELSPWKERIK 93

Query: 152 TLQ---SDWFSSVEGLFDVIVSNPPYIESVIVDCLG-LEVRDFDPRISLDGGIDGLSHYR 207
                  D+  S    +++IVSNPP+ E+          V      +S            
Sbjct: 94  VDNLSVQDYTKSCSKRYNLIVSNPPFFENAYKASEQSRTVARHTNFLSQV---------- 143

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            + +   + L K+G  +V    +      ++ +    F
Sbjct: 144 DLLNVSQQLLEKEGRLAVIYPTDAANSFQKMAQEFGFF 181


>gi|261418480|ref|YP_003252162.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y412MC61]
 gi|319767559|ref|YP_004133060.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y412MC52]
 gi|261374937|gb|ACX77680.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y412MC61]
 gi|317112425|gb|ADU94917.1| ribosomal protein L11 methyltransferase [Geobacillus sp. Y412MC52]
          Length = 312

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 54/218 (24%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+  Y+      + T+    +T+EP    EL+++     +            L  +EK
Sbjct: 112 TAWKKHYHPVKVSEKFTIVPTWETYEPASSDELIIEMDPGMAFGTGTHPTTVMCLQALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    ++D+GTG+G + + +           +D+   A++ A+ N   N V       
Sbjct: 172 YVRPGDHVIDVGTGSGILSI-VAAMLGARSVRALDLDPVAVDSARLNVKLNKVQHIVTVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    +E   DVIV+N                      ++                  
Sbjct: 231 QNNLLDHIEEPADVIVAN---------------------ILA--------EIILRFTGDA 261

Query: 214 SRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNA 249
            R L   G      G  Q    DV     +    +   
Sbjct: 262 YRLLKPGGRFIT-SGIIQAKKQDVKDGLLAAGFAIEEI 298


>gi|23465867|ref|NP_696470.1| hypothetical protein BL1306 [Bifidobacterium longum NCC2705]
 gi|227547538|ref|ZP_03977587.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|317483527|ref|ZP_07942511.1| methyltransferase small domain-containing protein [Bifidobacterium
           sp. 12_1_47BFAA]
 gi|23326568|gb|AAN25106.1| conserved hypothetical protein possibly in upfoo20 [Bifidobacterium
           longum NCC2705]
 gi|227211948|gb|EEI79844.1| possible 16S rRNA methyltransferase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|316915017|gb|EFV36455.1| methyltransferase small domain-containing protein [Bifidobacterium
           sp. 12_1_47BFAA]
          Length = 218

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +A+++  +N
Sbjct: 42  VDLGTSVLLKHAPEPPLTGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHAN 101

Query: 141 AVTNGVSERFDTLQSDWFS---------------SVEGLFDVIVSNPP 173
           A  NG +    T Q D  S                 +  FDVI SNPP
Sbjct: 102 AQANGHT-NIHTAQVDESSTPLPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|84388938|ref|ZP_00991146.1| putative methyltransferase [Vibrio splendidus 12B01]
 gi|84377002|gb|EAP93874.1| putative methyltransferase [Vibrio splendidus 12B01]
          Length = 383

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 76/211 (36%), Gaps = 39/211 (18%)

Query: 49  ESIHRILGWRDF----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILD 103
           + I  +  + ++     ++RL    + +     +   +D    + L  I +   +R I+D
Sbjct: 182 QPIQTVEPYVEWDVDGEDIRLKNLPNVY-----SGEALDQGARYMLEHIPQDPELRHIID 236

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE 162
           LG G G + +   + +P  +   VD S  A+E A+ N   N G    F  + ++     +
Sbjct: 237 LGCGNGVLSVKAGQLNPQARITCVDESFMAVESARQNVKDNLGEEGNFQFIANNCLDGFK 296

Query: 163 GLFDV-IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                 ++ NPP+ +   +             I+             +       L+  G
Sbjct: 297 KNSTYLVMCNPPFHQQQAITD----------HIAW-----------QMFCDAKHVLSNGG 335

Query: 222 LCSVE----IGYNQKVDVVRIFESRKLFLVN 248
              V     +GY+  V + R+F    +  + 
Sbjct: 336 KLIVIGNRHLGYD--VKLARLFGEANVETLE 364


>gi|3282093|emb|CAA07516.1| hypothetical protein [Thermotoga neapolitana]
          Length = 258

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R++D+G GTG + + + K+      + VD+  +A+E+AK N   N V       +S
Sbjct: 122 KKGDRVVDVGCGTGILAI-VAKKLGASYVLAVDVDEQAVEVAKENVQKNSVD--VTVKRS 178

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S VEG+FD++VSN
Sbjct: 179 DLLSEVEGVFDLVVSN 194


>gi|307298996|ref|ZP_07578798.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915421|gb|EFN45806.1| methyltransferase small [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 225

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 19/158 (12%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R L+LG G+G + + L K     +  GV++  +   +A  NA  NGV      +
Sbjct: 40  PPKGSRRALELGAGSGVISIYLAKNF-GLEVTGVEVDRELHAVATKNASLNGVENLTRFV 98

Query: 154 QSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDGGIDGLSHY 206
             D      ++   +FD++VSNPP+     V+    +    R  DP +++          
Sbjct: 99  NCDIDDYAANNRGEVFDMVVSNPPHFLHSGVESPDGKRNRARRIDPELAMV--------- 149

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              A   S+ L   G     +        VR+ E  KL
Sbjct: 150 --FASATSKLLKNRGAFFFLLHPRDLTKWVRLLEDFKL 185


>gi|228470842|ref|ZP_04055689.1| methyltransferase small [Porphyromonas uenonis 60-3]
 gi|228307409|gb|EEK16419.1| methyltransferase small [Porphyromonas uenonis 60-3]
          Length = 238

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL             ++LD+GTGTG + L L +  P      +DI  +A+  A+ N   +
Sbjct: 19  ALFLGAWARTAHTAGQVLDVGTGTGILSLMLAQTYPSAMVTAIDIDDEAVRTAQDNFSRS 78

Query: 145 GVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDC 182
             S R   L  D  +         +D+IVSNPPY + +    
Sbjct: 79  PYSNRLTALSCDITAPELALPLRHYDLIVSNPPYYDGLQPAT 120


>gi|215487919|ref|YP_002330350.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218559496|ref|YP_002392409.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli S88]
 gi|227887611|ref|ZP_04005416.1| methyltransferase [Escherichia coli 83972]
 gi|312965491|ref|ZP_07779723.1| methyltransferase small domain protein [Escherichia coli 2362-75]
 gi|331658720|ref|ZP_08359664.1| hypothetical protein ECKG_04543 [Escherichia coli TA206]
 gi|262828199|sp|B7UH15|TRMN6_ECO27 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828208|sp|B7MIR0|TRMN6_ECO45 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831334|sp|Q8FF14|TRMN6_ECOL6 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831340|sp|Q1R8F7|TRMN6_ECOUT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262831362|sp|A1AEA5|TRMN6_ECOK1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|215265991|emb|CAS10400.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218366265|emb|CAR04012.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli S88]
 gi|227835961|gb|EEJ46427.1| methyltransferase [Escherichia coli 83972]
 gi|281179624|dbj|BAI55954.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294494020|gb|ADE92776.1| putative methyltransferase [Escherichia coli IHE3034]
 gi|307554594|gb|ADN47369.1| putative methyltransferase [Escherichia coli ABU 83972]
 gi|307625876|gb|ADN70180.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UM146]
 gi|312289911|gb|EFR17799.1| methyltransferase small domain protein [Escherichia coli 2362-75]
 gi|323949229|gb|EGB45120.1| hypothetical protein ERKG_04430 [Escherichia coli H252]
 gi|330912343|gb|EGH40853.1| putative O-methyltransferase [Escherichia coli AA86]
 gi|331054385|gb|EGI26412.1| hypothetical protein ECKG_04543 [Escherichia coli TA206]
          Length = 245

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|262827868|sp|B4RSB8|TRMN6_ALTMD RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 253

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              E     RI+D+GTG+G + L +  K         ++I+  A   A  N      S++
Sbjct: 27  SWAEPNSAQRIVDIGTGSGILALMMAQKAQALACIDAIEINEGAASQAAFNFQNAKWSKQ 86

Query: 150 FDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
                SD  +      +D+I++NPPY ++
Sbjct: 87  LFIHHSDIKTFEAPYQYDMIITNPPYFDT 115


>gi|126173163|ref|YP_001049312.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS155]
 gi|229470400|sp|A3D130|RLMG_SHEB5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|125996368|gb|ABN60443.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS155]
          Length = 378

 Score = 72.4 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKDGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|227544931|ref|ZP_03974980.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus reuteri
           CF48-3A]
 gi|300910041|ref|ZP_07127501.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           SD2112]
 gi|227185098|gb|EEI65169.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus reuteri
           CF48-3A]
 gi|300892689|gb|EFK86049.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           SD2112]
          Length = 319

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 66/223 (29%), Gaps = 54/223 (24%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVR-------------- 100
           W+ +Y+        T  P+ E     D    L F  P +                     
Sbjct: 117 WQKYYHPLRVTDQLTIVPQWEEYEPADPKEKLIFLDPGMAFGTGTHPTTRLMLEALEKTV 176

Query: 101 -----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D+GTG+G + +A  K     K    DI   A+  AK N   N V++      +
Sbjct: 177 VGNEYVIDVGTGSGVLSIA-AKHLGAGKVDAYDIDEVAVNSAKKNLALNPVAKDVKVGVN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +    D+IV+N                      ++             +      
Sbjct: 236 SLLDGIHTQADLIVAN---------------------MLA--------EIIVPLIPQAYE 266

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLF--LVNAFKDYGG 255
           +L  DG   V  I  ++   + +  + +          KD+ G
Sbjct: 267 NLKPDGKFLVSGIIDDKAPLIRQKLQEQGFIIDDEQQMKDWHG 309


>gi|167553273|ref|ZP_02347023.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205322239|gb|EDZ10078.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 378

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +    +I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGKIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|300920743|ref|ZP_07137149.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300412314|gb|EFJ95624.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 219

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVVIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|226713003|sp|A0L0V1|RSMC_SHESA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 31/130 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 261

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIADGVSR 215
              G FD I+SNPP+                          DGL+      +      ++
Sbjct: 262 QTSGKFDGIISNPPF-------------------------HDGLASTTSIAQRFVADSAK 296

Query: 216 HLNKDGLCSV 225
            L   G+  +
Sbjct: 297 QLQSKGIWQI 306


>gi|170759978|ref|YP_001785391.1| hypothetical protein CLK_3237 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406967|gb|ACA55378.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 246

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 21/169 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLANFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPR 193
             N + E+   ++ D         +E   DV+  NPPY    + I++      +   +  
Sbjct: 90  KYNNLQEKVKFIEGDLKNLKLLKDIE-KVDVVTVNPPYKTQGTGIININDKNAISRHEIC 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            +LD           +       L   G   +    ++ VD++ +    
Sbjct: 149 CNLD----------DVVKAAKVLLKDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|306833037|ref|ZP_07466169.1| methyltransferase [Streptococcus bovis ATCC 700338]
 gi|304424936|gb|EFM28070.1| methyltransferase [Streptococcus bovis ATCC 700338]
          Length = 253

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 71/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY--I 175
              + V++  +   +A+ +   N +  +   +  D  + ++ +     D+I+ NPPY  +
Sbjct: 70  APIIEVELQERLANMAERSIQLNQLENQVQMINDDLKNLLKHVPRSGVDLILCNPPYFKV 129

Query: 176 ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I +     L  +G  ++    ++ +
Sbjct: 130 SETSKKNLSEHYLLARHEIATNL----------EEICEVARHALKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|320094007|ref|ZP_08025832.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319979051|gb|EFW10569.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 203

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 67/207 (32%), Gaps = 50/207 (24%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + + +S   F        L    L    P +  R  +  LDLG G G + + +  ESP
Sbjct: 27  HELTMRVSPKVF--SSSRLDLGTRQLLAEAPELPGRGTL--LDLGCGWGPLAVVMGLESP 82

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPY 174
                 VD++ +AL++ + NA  NG +        +   ++E        FD I SNPP 
Sbjct: 83  GATVWAVDVNTRALDLTERNAEANGAAN---VSAMNAGEALERARSEGVRFDAIWSNPP- 138

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYN 230
                       VR             G    R +       L   G   + +    G +
Sbjct: 139 ------------VRV------------GKEAMRRMLSDWLSLLAPGGAAYLVVQRNLGAD 174

Query: 231 --------QKVDVVRIFESRKLFLVNA 249
                   Q +   R    +   ++  
Sbjct: 175 SLVAWLVSQGMAARRYASKKGYRIIEV 201


>gi|293446930|ref|ZP_06663352.1| O-methyltransferase [Escherichia coli B088]
 gi|291323760|gb|EFE63188.1| O-methyltransferase [Escherichia coli B088]
          Length = 285

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|315604446|ref|ZP_07879512.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315314152|gb|EFU62203.1| 16S rRNA methyltransferase [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 204

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 81/199 (40%), Gaps = 30/199 (15%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + + + +SS  F   +    T  L++ A     P +  R  +  LDLG G G +   +  
Sbjct: 27  FTLSMRVSSRVFSASKLDTGTRQLLEVA-----PDLPPRGAL--LDLGCGWGPLATVMSL 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173
           E+P  +   VD++ +A+++   NA  NG S     L++    +        FDVI SNPP
Sbjct: 80  EAPRCEVWAVDVNSRAVDLTARNAAANGASG-VRALKACEALAESVRSATFFDVIWSNPP 138

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQK 232
               +  + +   +  +  R++ +G    L   R + AD +   LN           +Q 
Sbjct: 139 V--RIGKEAMHEMLSQWLGRLAPEGFAY-LVVQRHLGADSLIAWLN-----------DQG 184

Query: 233 VDVVRIFESRKLFLVNAFK 251
           +   +    +   ++   +
Sbjct: 185 LAARKYASKKGYRIIEVRR 203


>gi|293410991|ref|ZP_06654567.1| O-methyltransferase [Escherichia coli B354]
 gi|293415844|ref|ZP_06658487.1| O-methyltransferase [Escherichia coli B185]
 gi|301021939|ref|ZP_07185898.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|331643199|ref|ZP_08344334.1| hypothetical protein ECHG_02469 [Escherichia coli H736]
 gi|291433492|gb|EFF06471.1| O-methyltransferase [Escherichia coli B185]
 gi|291471459|gb|EFF13943.1| O-methyltransferase [Escherichia coli B354]
 gi|299881406|gb|EFI89617.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|331039997|gb|EGI12217.1| hypothetical protein ECHG_02469 [Escherichia coli H736]
          Length = 285

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 79  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 138

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 139 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 188

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 189 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 247

Query: 262 F 262
            
Sbjct: 248 A 248


>gi|38605120|sp|O86951|PRMA_THENE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
          Length = 264

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R++D+G GTG + + + K+      + VD+  +A+E+AK N   N V       +S
Sbjct: 128 KKGDRVVDVGCGTGILAI-VAKKLGASYVLAVDVDEQAVEVAKENVQKNSVD--VTVKRS 184

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S VEG+FD++VSN
Sbjct: 185 DLLSEVEGVFDLVVSN 200


>gi|229825148|ref|ZP_04451217.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC
           49176]
 gi|229790520|gb|EEP26634.1| hypothetical protein GCWU000182_00499 [Abiotrophia defectiva ATCC
           49176]
          Length = 244

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 75/194 (38%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            + +  S D F    +  LL   A A        +   R++DLGTGTG + L L  ++  
Sbjct: 18  GLHIIQSPDKFCFGMDAVLLSGFAYA--------KKGYRVIDLGTGTGILPLLLWAKTEG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYI-- 175
               G++I  ++ ++A+ + V N ++   + +  D  S         FDV+ SNPPY+  
Sbjct: 70  EHFTGLEIQEESADMARRSVVGNNIT-NIEIVDGDIKSVDKLFKRQSFDVVTSNPPYMIN 128

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              V       ++   +   +L            +    +  L  +G   +     +   
Sbjct: 129 EHGVANPQAPKQIARHEILCTL----------EDVVKAAAYLLKSNGKFFMVH---RPFR 175

Query: 235 VVRIFESRKLFLVN 248
           +  +FE+   + + 
Sbjct: 176 LPEVFENLGKYRLE 189


>gi|194770513|ref|XP_001967337.1| GF20002 [Drosophila ananassae]
 gi|190618099|gb|EDV33623.1| GF20002 [Drosophila ananassae]
          Length = 222

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 13/191 (6%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVD 128
             +EP  ++ LL+D AL   L  +EK      +++G+G+G +  AL K+       +  D
Sbjct: 16  HVYEPAEDSFLLLD-ALEKDLNFLEKLKPSLCVEIGSGSGVIITALAKKIGTGSICLATD 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEV 187
           I+ KA +  +  AV NG   R   ++ +   ++     DV++ NPPY+ +   +    + 
Sbjct: 75  INLKACDATRKTAVRNGA--RVCPIRCNLTDALRSRTVDVLLFNPPYVVTSDEELQTQQF 132

Query: 188 -RDFDPRI------SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIF 239
               +P        S  GG DG      + D +   L+  G+   + +  N+  ++++  
Sbjct: 133 NSGAEPSTERNLVFSWAGGKDGRRITDLLLDKLDDVLSPTGVLYLLLLQENKPNEIIKHL 192

Query: 240 ESRKLFLVNAF 250
           +S     V   
Sbjct: 193 DSLHFRAVKFL 203


>gi|295398609|ref|ZP_06808640.1| O-methyltransferase [Aerococcus viridans ATCC 11563]
 gi|294973149|gb|EFG48945.1| O-methyltransferase [Aerococcus viridans ATCC 11563]
          Length = 252

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 21/156 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSN 140
           VD+ L     ++    V +++D  +G G + L L  K S   +  G++I  +  ++AK +
Sbjct: 33  VDAILLAHFAQVSSSRVKQVIDFCSGNGVIPLLLSAKTSDKTQIHGIEIQPQVADMAKRS 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIESVIVDCL----GLEVRDFD 191
              N ++++    Q D   SV   F     DV+  NPPY +      +       +   +
Sbjct: 93  MAHNDLADKITVHQMDL-KSVRDHFKKDSVDVVTCNPPYFKKYDESKVNLLDAKTLARHE 151

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             +++          + I       L   G   +  
Sbjct: 152 --VAMTA--------KDIFQQAQFVLRNRGKLYIVH 177


>gi|282875417|ref|ZP_06284289.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
 gi|281295774|gb|EFA88296.1| methyltransferase small domain protein [Staphylococcus epidermidis
           SK135]
          Length = 226

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 21/162 (12%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E R   +++DL +G G + L L  +S      G++I  + + +A+ +   N +++R    
Sbjct: 24  EVRKNDKVMDLCSGNGVIPLLLAAKSTQP-IEGIEIQEQLVSMARRSFKLNDLNDRLTMH 82

Query: 154 QSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHY 206
             D            + ++  NPPY +         E       +   +L          
Sbjct: 83  HMDLKDVYQTFQPAQYTLVTCNPPYFKMNQNHQHQKEAHKIARHEIMCNL---------- 132

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           +   +     L + G   +     +   ++ +    +   + 
Sbjct: 133 KDCIEAARHLLKEGGRFIMVH---RAERLMDVLTELRHGKIE 171


>gi|145594015|ref|YP_001158312.1| methyltransferase small [Salinispora tropica CNB-440]
 gi|145303352|gb|ABP53934.1| methyltransferase small [Salinispora tropica CNB-440]
          Length = 494

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 67/175 (38%), Gaps = 21/175 (12%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E  L +  A    +    ++ V   LDLGTG+G   L L   +   +    D+S +AL  
Sbjct: 135 EHVLGIGGATQTLIGATVRQPVETALDLGTGSGIQALHLATHAR--RVTATDLSERALRF 192

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A + A  NG    ++ L+ D  + V G  FD++VSNPP++                  + 
Sbjct: 193 AATTAALNGQD--WELLRGDLIAPVAGRRFDLVVSNPPFVVGPGTTT----------HVY 240

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEI-GYNQKVDVVRIFESRKL 244
            D G  G +    +A      L + G        V + G +    V   F    L
Sbjct: 241 RDSGRVGDAIAAELAAAAPDLLTEGGTMQYLANWVHVAGEDWAERVAGWFAGSGL 295


>gi|110642737|ref|YP_670467.1| hypothetical protein ECP_2577 [Escherichia coli 536]
 gi|123048967|sp|Q0TER3|TRMN6_ECOL5 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110344329|gb|ABG70566.1| hypothetical protein YfiC [Escherichia coli 536]
          Length = 245

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|294816591|ref|ZP_06775233.1| methyltransferase small [Streptomyces clavuligerus ATCC 27064]
 gi|326445506|ref|ZP_08220240.1| methyltransferase small [Streptomyces clavuligerus ATCC 27064]
 gi|294321406|gb|EFG03541.1| methyltransferase small [Streptomyces clavuligerus ATCC 27064]
          Length = 234

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 22/170 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               T   + F P             F    +       +L++G+GTG   +     S  
Sbjct: 31  GRDWTQLPEVFAPHLTGST------EFFSTHLPYPVGGSLLEVGSGTGVTAVTAAL-SGC 83

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIV--SNPPYIES 177
            + V VDIS  A+  +  NA  + VS+R   L+SD F ++  +  FD I   SN  Y  +
Sbjct: 84  ARVVAVDISPAAVCNSLLNAECHRVSDRVRVLESDLFGALAPDERFDAIFWNSNVIYTPA 143

Query: 178 VIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   ++    FDP   L G                 HL + G   +
Sbjct: 144 GFAGSGPGDLHGAVFDPGYVLHG---------RYLREGPDHLAQGGRLLL 184


>gi|117921884|ref|YP_871076.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3]
 gi|117614216|gb|ABK49670.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. ANA-3]
          Length = 353

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 31/130 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 272

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIADGVSR 215
              G FD I+SNPP+                          DGL+      +      ++
Sbjct: 273 QTSGKFDGIISNPPF-------------------------HDGLASTTSIAQRFVADSAK 307

Query: 216 HLNKDGLCSV 225
            L   G+  +
Sbjct: 308 QLQSKGIWQI 317


>gi|89109381|ref|AP_003161.1| predicted methyltransferase [Escherichia coli str. K-12 substr.
           W3110]
 gi|90111461|ref|NP_417070.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157162055|ref|YP_001459373.1| putative methyltransferase [Escherichia coli HS]
 gi|170019142|ref|YP_001724096.1| methyltransferase small [Escherichia coli ATCC 8739]
 gi|170082184|ref|YP_001731504.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           coli str. K-12 substr. DH10B]
 gi|170679700|ref|YP_001744764.1| putative methyltransferase [Escherichia coli SMS-3-5]
 gi|188492006|ref|ZP_02999276.1| putative methyltransferase [Escherichia coli 53638]
 gi|194437703|ref|ZP_03069799.1| putative methyltransferase [Escherichia coli 101-1]
 gi|218706078|ref|YP_002413597.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|238901740|ref|YP_002927536.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BW2952]
 gi|253772525|ref|YP_003035356.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162550|ref|YP_003045658.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|256021738|ref|ZP_05435603.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia sp. 4_1_40B]
 gi|297519406|ref|ZP_06937792.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli OP50]
 gi|307139212|ref|ZP_07498568.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli H736]
 gi|312973179|ref|ZP_07787351.1| methyltransferase small domain protein [Escherichia coli 1827-70]
 gi|331664143|ref|ZP_08365053.1| hypothetical protein ECMG_01291 [Escherichia coli TA143]
 gi|13638617|sp|P31825|TRMN6_ECOLI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828123|sp|C5W7S9|TRMN6_ECOBB RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828135|sp|C6UBI3|TRMN6_ECOBR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828142|sp|C4ZYJ8|TRMN6_ECOBW RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828150|sp|B1XBQ2|TRMN6_ECODH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828154|sp|A8A386|TRMN6_ECOHS RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828219|sp|B1IVQ2|TRMN6_ECOLC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828226|sp|B7N6G4|TRMN6_ECOLU RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828237|sp|B1LP88|TRMN6_ECOSM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|85675466|dbj|BAE76751.1| predicted methyltransferase [Escherichia coli str. K12 substr.
           W3110]
 gi|87082131|gb|AAC75628.2| tRNA (adenine-N(6)-)-methyltransferase [Escherichia coli str. K-12
           substr. MG1655]
 gi|157067735|gb|ABV06990.1| putative methyltransferase [Escherichia coli HS]
 gi|169754070|gb|ACA76769.1| methyltransferase small [Escherichia coli ATCC 8739]
 gi|169890019|gb|ACB03726.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli str. K-12 substr. DH10B]
 gi|170517418|gb|ACB15596.1| putative methyltransferase [Escherichia coli SMS-3-5]
 gi|188487205|gb|EDU62308.1| putative methyltransferase [Escherichia coli 53638]
 gi|194423509|gb|EDX39500.1| putative methyltransferase [Escherichia coli 101-1]
 gi|218433175|emb|CAR14073.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli UMN026]
 gi|238863086|gb|ACR65084.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BW2952]
 gi|242378175|emb|CAQ32950.1| tRNA m[6]A37 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323569|gb|ACT28171.1| methyltransferase small [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974451|gb|ACT40122.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli B str. REL606]
 gi|253978618|gb|ACT44288.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli BL21(DE3)]
 gi|260448345|gb|ACX38767.1| methyltransferase small [Escherichia coli DH1]
 gi|309702961|emb|CBJ02292.1| putative DNA-binding protein [Escherichia coli ETEC H10407]
 gi|310331774|gb|EFP99009.1| methyltransferase small domain protein [Escherichia coli 1827-70]
 gi|315137199|dbj|BAJ44358.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli DH1]
 gi|315615837|gb|EFU96469.1| methyltransferase small domain protein [Escherichia coli 3431]
 gi|323936315|gb|EGB32606.1| yfiC protein [Escherichia coli E1520]
 gi|323941162|gb|EGB37347.1| gyfiC [Escherichia coli E482]
 gi|323961190|gb|EGB56803.1| gyfiC [Escherichia coli H489]
 gi|323971099|gb|EGB66346.1| gyfiC [Escherichia coli TA007]
 gi|331059942|gb|EGI31919.1| hypothetical protein ECMG_01291 [Escherichia coli TA143]
          Length = 245

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|313123576|ref|YP_004033835.1| ribosomal protein l11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
 gi|312280139|gb|ADQ60858.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ND02]
          Length = 314

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 53/212 (25%)

Query: 57  WRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       L +  +   ++P  + + ++               + LA        
Sbjct: 115 WQKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 174

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              + + D+GTG+G + +A   +      +  DIS +++  AK NA  NG+ +     ++
Sbjct: 175 VKPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAKENAALNGIHD-IALQKT 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + V+G FD+IV+N                      ++             +   +  
Sbjct: 233 SLLAGVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDS 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           HLN+DG      I Y Q   + +        +
Sbjct: 264 HLNEDGQVIFSGIDYLQLPKIEQALAENGFQI 295


>gi|262044984|ref|ZP_06018026.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037711|gb|EEW38940.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 347

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 28/168 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G     N+ +      F  R      +D      L  +E     ++LD+G G G +  AL
Sbjct: 165 GEYTLDNLTIKTLPGVFS-RDG----LDVGSQLLLSTLESHTKGKVLDVGCGAGVLAAAL 219

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
              SP  +    D+S  A+E +++    NG++   D   S+ FS V G FD+I+SNPP+ 
Sbjct: 220 ASHSPKVRLTLCDVSAPAVEASRATLAANGLAG--DVFASNVFSEVNGRFDMIISNPPFH 277

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                DG    L   + +  G   HLN  G  
Sbjct: 278 ---------------------DGLQTSLEAAQALIRGAVHHLNSGGEL 304


>gi|148543949|ref|YP_001271319.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri DSM
           20016]
 gi|184153345|ref|YP_001841686.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri JCM
           1112]
 gi|227364862|ref|ZP_03848909.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus reuteri
           MM2-3]
 gi|325682513|ref|ZP_08162030.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           MM4-1A]
 gi|166989898|sp|A5VJF8|PRMA_LACRD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710093|sp|B2G6X4|PRMA_LACRJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|148530983|gb|ABQ82982.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactobacillus reuteri DSM 20016]
 gi|183224689|dbj|BAG25206.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri JCM
           1112]
 gi|227070125|gb|EEI08501.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus reuteri
           MM2-3]
 gi|324978352|gb|EGC15302.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           MM4-1A]
          Length = 319

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 54/223 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR------------- 96
           W+ +Y+       + +    + ++P    E L+      +                    
Sbjct: 117 WQKYYHPLRVTDQLTIVPQWEEYQPADPKEKLIFLDPGMAFGTGTHPTTRLMLEALEKTI 176

Query: 97  -DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D+GTG+G + +A  K     K    DI   A+  AK N   N V++      +
Sbjct: 177 VGNEYVIDVGTGSGVLSIA-AKHLGAGKVDAYDIDEVAVNSAKKNLALNPVAKDVKVGIN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +    D+IV+N                      ++             +      
Sbjct: 236 SLLDGIHTKADLIVAN---------------------ILA--------EIIVPLIPQAYE 266

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLF--LVNAFKDYGG 255
           +L   G   V  I  ++   + +  + +          KD+ G
Sbjct: 267 NLKPGGKFLVSGIIDDKAPLIRQKLQEQGFIIDDEQQMKDWHG 309


>gi|59711052|ref|YP_203828.1| S-adenosyl-L-methionine-dependent methyltransferase [Vibrio
           fischeri ES114]
 gi|75354570|sp|Q5E7Q6|TRMN6_VIBF1 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|59479153|gb|AAW84940.1| predicted S-adenosyl-L-methionine-dependent methyltransferase
           [Vibrio fischeri ES114]
          Length = 234

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + R   +ILD+G GTG + L   + +       +++   A ++A+ N   +   ER  
Sbjct: 31  WADIRACSQILDIGAGTGLLSLMSAQRNSDAHIDAIELMPIAADVARLNFYQSPWKERLT 90

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
            +  D+ +      +D I+ NPPY  +  
Sbjct: 91  LIHHDFLTYQAPHKYDAIICNPPYFNNGE 119


>gi|312139425|ref|YP_004006761.1| methyltransferase [Rhodococcus equi 103S]
 gi|311888764|emb|CBH48076.1| putative methyltransferase [Rhodococcus equi 103S]
          Length = 492

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 88/248 (35%), Gaps = 22/248 (8%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C V  ++S    +D D  +         + +   L    +    G R   +  L  S  T
Sbjct: 70  CDVADVASALSPLDIDDAVAAGLLSRDGDTVRAELDLRPLDLGTGNRWVLS-DLDGSMRT 128

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
                +  + V  A    L     R V  +LD+GTG G   L     +        D++ 
Sbjct: 129 RPTADDHVIGVGHASLSLLQGTPTRPVGTVLDVGTGCGIQALRAADYAG--TVTATDVNP 186

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A ++  + A  NG+   F+ L+  WF  V G  FD IV+NPP++ S     +    R  
Sbjct: 187 RATDLTAATAALNGLD--FEILEGSWFEPVAGRTFDQIVANPPFVVSE--ARVVNSYR-- 240

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKL 244
                 D G+D       +    + HL   G  ++        G + +  V     +  +
Sbjct: 241 ------DSGLDLDGASELMISEAADHLAPGGTAAMLASWLHVDGEDWRHRVASWLPAHGV 294

Query: 245 FLVNAFKD 252
                 +D
Sbjct: 295 DAWIVQRD 302


>gi|239621147|ref|ZP_04664178.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239515608|gb|EEQ55475.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 218

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 17/108 (15%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD   +  L    +  +    LDLG G G + L L  ESP      VD++ +A+++  +N
Sbjct: 42  VDLGTSVLLKHAPEPPLTGDFLDLGCGWGPIALTLAFESPEANVWAVDVNERAVDLTHAN 101

Query: 141 AVTNGVSERFDTLQSDWFS---------------SVEGLFDVIVSNPP 173
           A  NG +    T Q D  S                 +  FDVI SNPP
Sbjct: 102 AQANGHT-NIHTAQVDESSTPLPAENQPAFCETVPSDLTFDVIWSNPP 148


>gi|148377473|ref|YP_001256349.1| DNA methylase [Mycoplasma agalactiae PG2]
 gi|148291519|emb|CAL58905.1| DNA methylase [Mycoplasma agalactiae PG2]
          Length = 261

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 22/167 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              + R+L++GT  GA+ + + + S   K   ++I  KA ++A +N + N   E+ + +Q
Sbjct: 44  NHKIKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLAANNVILNNKQEQINVIQ 103

Query: 155 SDWFSS-------VEGLFDVIVSNPP---YIESVIVDCLGLEVR--DFDPRISLDGGIDG 202
           +D+          V+  ++ IV NPP   Y +S I   +  EV     + +++L      
Sbjct: 104 ADFNDFYKEHTKLVKPKYEAIVCNPPFYVYDKSKISKKISEEVLIATHEVKLNL------ 157

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                 I  G ++ + + G  ++ I   + VD   +    K      
Sbjct: 158 ----EQIISGSAKIIEQKGYLTLVIPAERLVDCFCLMRQYKFEPKRV 200


>gi|78484558|ref|YP_390483.1| methyltransferase small [Thiomicrospira crunogena XCL-2]
 gi|78362844|gb|ABB40809.1| Conserved hypothetical protein with a methyltransferase domain
           [Thiomicrospira crunogena XCL-2]
          Length = 192

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 11/134 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +    +   F PR      +DS     L  +E +    +LD+G G G + L +   +   
Sbjct: 22  LTFHTTWGIFSPRE-----IDSGTWLLLKHLELKPQETVLDIGCGYGPIGLTIAANT-QG 75

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPY-IESVI 179
           +   VD    A++ A  NA  NG++       S+  S+V     F  +VSN P  +   +
Sbjct: 76  EVHMVDKDFVAVDYANKNAELNGLTH-AKAYLSNGLSNVPKELKFSTVVSNIPAKVGKEM 134

Query: 180 VDCLGLEVRD-FDP 192
           +  L  +V +  +P
Sbjct: 135 LSILLHDVHEQLEP 148


>gi|16126353|ref|NP_420917.1| hypothetical protein CC_2114 [Caulobacter crescentus CB15]
 gi|221235136|ref|YP_002517572.1| methyltransferase [Caulobacter crescentus NA1000]
 gi|13423601|gb|AAK24085.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220964308|gb|ACL95664.1| methyltransferase [Caulobacter crescentus NA1000]
          Length = 247

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 25/201 (12%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R+LG R    VRL  + D + P  +  LL  +A   +LP        R+L+ G G G   
Sbjct: 10  RVLGGR----VRLRQAPDGYRPGMDAALL--AATCDALP------GQRVLEPGCGVGGAL 57

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVI 168
           LA     P     GV+    A  +A  N   NG++ R    Q D  +    L    FD +
Sbjct: 58  LAAATRRPEAIFQGVERDETAASLAAENVALNGLTSRVAIAQGDVEAGFRALGLPVFDAV 117

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           ++NPPY +                 ++ DG   GL+ +        R   + G  ++   
Sbjct: 118 MANPPYFDDPS-ALRAPSPAKSGAWMA-DG---GLAAWTAFCLKAVR---EGGTITLIHR 169

Query: 229 YNQKVDVVRIFE-SRKLFLVN 248
            ++  D++ +       F + 
Sbjct: 170 ADRLADILSLLAPKAGSFRIR 190


>gi|18311009|ref|NP_562943.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           str. 13]
 gi|110801769|ref|YP_699308.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           SM101]
 gi|168204734|ref|ZP_02630739.1| ribosomal protein L11 methyltransferase [Clostridium perfringens E
           str. JGS1987]
 gi|168208729|ref|ZP_02634354.1| ribosomal protein L11 methyltransferase [Clostridium perfringens B
           str. ATCC 3626]
 gi|168212936|ref|ZP_02638561.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           CPE str. F4969]
 gi|169343726|ref|ZP_02864725.1| ribosomal protein L11 methyltransferase [Clostridium perfringens C
           str. JGS1495]
 gi|182626897|ref|ZP_02954631.1| ribosomal protein L11 methyltransferase [Clostridium perfringens D
           str. JGS1721]
 gi|38605393|sp|Q8XIT6|PRMA_CLOPE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|123145978|sp|Q0SRE9|PRMA_CLOPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|18145691|dbj|BAB81733.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           str. 13]
 gi|110682270|gb|ABG85640.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           SM101]
 gi|169298286|gb|EDS80376.1| ribosomal protein L11 methyltransferase [Clostridium perfringens C
           str. JGS1495]
 gi|170663557|gb|EDT16240.1| ribosomal protein L11 methyltransferase [Clostridium perfringens E
           str. JGS1987]
 gi|170713216|gb|EDT25398.1| ribosomal protein L11 methyltransferase [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715644|gb|EDT27826.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           CPE str. F4969]
 gi|177907747|gb|EDT70359.1| ribosomal protein L11 methyltransferase [Clostridium perfringens D
           str. JGS1721]
          Length = 313

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTG+G + L +  +      VGVD+   A++ AK N   N V +  + L  
Sbjct: 176 KADTTVFDIGTGSGILAL-VASKLGAKHVVGVDLDPVAVDSAKENISFNNV-DNIEVLYG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--- 212
           +    V+G  D++V+N   I + I+  L  +V+      +L+   DG+     I      
Sbjct: 234 NLLDVVDGKADIVVAN---IIAEIICILVDDVKK-----ALN--KDGIFITSGIIHERRQ 283

Query: 213 -VSRHLNKDGLCSVEIGYN 230
            V   L ++G   +E+  +
Sbjct: 284 MVIDKLEQEGFEVMEVNKD 302


>gi|311031619|ref|ZP_07709709.1| ribosomal protein L11 methyltransferase [Bacillus sp. m3-13]
          Length = 313

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +YN      + T+    +T+EP    E +++              + L       
Sbjct: 112 TAWKKYYNPVKISEKFTIVPTWETYEPVSSDEKIIELDPGMAFGTGTHPTTVLCIQAIER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A        + + +D+   A+E AK N   N V       
Sbjct: 172 TVKPQDKVIDVGTGSGVLSIA-AAMLDAKEVLALDLDDVAVESAKLNIKLNKVHPTVTVK 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
           Q++   +VEG  DV+V+N
Sbjct: 231 QNNLLKNVEGPVDVVVAN 248


>gi|300901471|ref|ZP_07119554.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
 gi|300355109|gb|EFJ70979.1| methyltransferase small domain protein [Escherichia coli MS 198-1]
          Length = 376

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 250 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 309

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           TN     +R + + ++  S VE   F+ ++ NPP+ +   +           PR
Sbjct: 310 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWDHFHTPR 363


>gi|226713001|sp|Q0HMF0|RSMC_SHESM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 261

Query: 160 SVEGLFDVIVSNPPYIE 176
              G FD I+SNPP+ +
Sbjct: 262 QTSGKFDGIISNPPFHD 278


>gi|118581364|ref|YP_902614.1| ribosomal protein L11 methyltransferase [Pelobacter propionicus DSM
           2379]
 gi|166223426|sp|A1AT86|PRMA_PELPD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|118504074|gb|ABL00557.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Pelobacter
           propionicus DSM 2379]
          Length = 309

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L    L   +  +       +LDLGTG+G + +A        + V VDI  +A+E+
Sbjct: 150 ETTRLCLELLEEIMDGMPILLTPAVLDLGTGSGILAMA-AVRLGAGRVVAVDIDPQAVEV 208

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           A+ N   N ++++ +   +    ++ G FDVI++N
Sbjct: 209 ARENLALNDLTDQVECDTTPL-EALPGTFDVILAN 242


>gi|300916708|ref|ZP_07133424.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
 gi|300416003|gb|EFJ99313.1| methyltransferase small domain protein [Escherichia coli MS 115-1]
          Length = 409

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 245 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 304

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 305 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 346

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 347 ---DNVAWEMFHHARRCLKINGELYI 369


>gi|161506215|ref|YP_001573327.1| hypothetical protein SARI_04407 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|229564340|sp|A9MPU2|RLMG_SALAR RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|160867562|gb|ABX24185.1| hypothetical protein SARI_04407 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 378

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNMPEAFERCEFMINNALSGVEPYRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|300768203|ref|ZP_07078108.1| methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|300494267|gb|EFK29430.1| methyltransferase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
          Length = 261

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F    +  LL D A      ++ K    +I+DL  G GAV L        
Sbjct: 28  DIQIIQSSQVFAFSLDAVLLGDFA------QVAKGVKSQIVDLCAGNGAVGL-FASAKTQ 80

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
                V+I  +  ++A+ + V N ++++   L  D  +      +   D ++ NPPY + 
Sbjct: 81  GHITAVEIQPRLADMAQRSVVLNDLTQQMTVLNEDLLAITRQLPKDSVDTVLCNPPYFKD 140

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                    V++ +P +++      LS     I    S  L  +G      
Sbjct: 141 R-----PQSVKNPNPHLAIARHE--LSANLDQILAVTSDLLKMNGKAYFVH 184


>gi|157158975|ref|YP_001463899.1| putative methyltransferase [Escherichia coli E24377A]
 gi|191167988|ref|ZP_03029790.1| putative methyltransferase [Escherichia coli B7A]
 gi|218696203|ref|YP_002403870.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|262828192|sp|A7ZQ20|TRMN6_ECO24 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|262828216|sp|B7LDG8|TRMN6_ECO55 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157081005|gb|ABV20713.1| putative methyltransferase [Escherichia coli E24377A]
 gi|190901995|gb|EDV61742.1| putative methyltransferase [Escherichia coli B7A]
 gi|218352935|emb|CAU98734.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli 55989]
 gi|323944575|gb|EGB40644.1| methyltransferase small [Escherichia coli H120]
 gi|324118215|gb|EGC12111.1| methyltransferase small [Escherichia coli E1167]
          Length = 245

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|306830920|ref|ZP_07464082.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304426943|gb|EFM30053.1| methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 253

 Score = 72.4 bits (177), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 71/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P+I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPKIPSRGL--IVDLCSGNGAVGL-FASTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY--I 175
              + V++  +   +A+ +   N +  +   +  D  + +  +     D+I+ NPPY  +
Sbjct: 70  APIIEVELQERLANMAERSIQLNQLENQVQMINDDLKNLLNHVPRSGVDLILCNPPYFKV 129

Query: 176 ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
             +    L         +   +L            I +     L  +G  ++    ++ +
Sbjct: 130 SEMSKKNLSEHYLLARHEIATNL----------EEICEVARHALKSNGRLAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|332092601|gb|EGI97673.1| hypothetical protein SB359474_2998 [Shigella boydii 3594-74]
          Length = 219

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|315225236|ref|ZP_07867053.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287]
 gi|314944919|gb|EFS96951.1| SAM-dependent methyltransferase [Capnocytophaga ochracea F0287]
          Length = 240

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 12/157 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G GTG + L L + S       V+I  KA      N   +   +R  
Sbjct: 29  WTPIENPKSILDIGAGTGLLSLMLAQRSDAVVIDAVEIDEKAYIECTENFEESQWGDRLF 88

Query: 152 TLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              + +      ++ ++D+I+SNPP+  +        + +  +   +     D LS    
Sbjct: 89  CYHASFQEFALEIDEVYDLIISNPPFYTA--------DYKTAEKARNTARFTDTLSFSE- 139

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           + +GVS+ L+ +G+ SV + Y++    + +     LF
Sbjct: 140 LLEGVSQLLSDEGVFSVILPYSETEGFIALASGYGLF 176


>gi|294496905|ref|YP_003560605.1| methyltransferase [Bacillus megaterium QM B1551]
 gi|294346842|gb|ADE67171.1| methyltransferase [Bacillus megaterium QM B1551]
          Length = 248

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+  S   F    +  LL   A               ++DL +G G + L L K +   
Sbjct: 19  MRIIQSPSVFSFSLDAVLLSHFAYVPIRK-------GNLVDLCSGNGVIPLFLSKRTKG- 70

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           K +GV+I  +   +A+ +   N +  +   +  D  ++ +    G +DV+  NPPY  + 
Sbjct: 71  KIIGVEIQERLHSMAQRSIAYNQLDGQIKMIHGDLKNAPQELGYGKYDVVTCNPPYFTTS 130

Query: 179 IVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             + +       +   +   SL            +    S+ + + G  ++     + +D
Sbjct: 131 NKEEINENEHFAIARHEIHCSL----------EDVIRASSQLVKQGGKVALVHRPGRLLD 180

Query: 235 VVRIFESRKL 244
           +V +    +L
Sbjct: 181 IVTLMRQYRL 190


>gi|254556888|ref|YP_003063305.1| methyltransferase (putative) [Lactobacillus plantarum JDM1]
 gi|254045815|gb|ACT62608.1| methyltransferase (putative) [Lactobacillus plantarum JDM1]
          Length = 252

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS  F    +  LL D A      ++ K    +I+DL  G GAV L        
Sbjct: 19  DIQIIQSSQVFAFSLDAVLLGDFA------QVAKGVKSQIVDLCAGNGAVGL-FASAKTQ 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
                V+I  +  ++A+ + V N ++++   L  D  +      +   D ++ NPPY + 
Sbjct: 72  GHITAVEIQPRLADMAQRSVVLNDLTQQMTVLNEDLLAITRQLPKDSVDTVLCNPPYFKD 131

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                    V++ +P +++      LS     I    S  L  +G      
Sbjct: 132 R-----PQSVKNPNPHLAIARHE--LSANLDQILAVTSDLLKMNGKAYFVH 175


>gi|297584654|ref|YP_003700434.1| 50S ribosomal protein L11 methyltransferase [Bacillus
           selenitireducens MLS10]
 gi|297143111|gb|ADH99868.1| ribosomal protein L11 methyltransferase [Bacillus selenitireducens
           MLS10]
          Length = 316

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y        V +T + + +E   + EL+++              + +   +   
Sbjct: 112 TAWKKYYKPVKVSDRVTITPTWEMYEAVHDDELVIELDPGMAFGTGTHPTTVMCIQMIEK 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R+   ++D+G GTG + +A  K     K   +D+   A+  A  N   N V +R    
Sbjct: 172 YIREGDSLVDVGCGTGVLSIAAAK-LGAAKVHALDLDEVAVHSAVINTKLNKVHDRVSVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q +         D+IV+N                      ++            TI +  
Sbjct: 231 QGNLLDDTPSEQDLIVAN---------------------ILA--------EVIVTIPEEA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            +     G+      IG  Q   V    E     ++   
Sbjct: 262 LKLTRPGGMFITSGIIGQKQA-MVTEALEKAGWTVMETI 299


>gi|226713002|sp|Q0HRD8|RSMC_SHESR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 204 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 261

Query: 160 SVEGLFDVIVSNPPYIE 176
              G FD I+SNPP+ +
Sbjct: 262 QTSGKFDGIISNPPFHD 278


>gi|113969031|ref|YP_732824.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4]
 gi|113883715|gb|ABI37767.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-4]
          Length = 353

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 272

Query: 160 SVEGLFDVIVSNPPYIE 176
              G FD I+SNPP+ +
Sbjct: 273 QTSGKFDGIISNPPFHD 289


>gi|71415319|ref|XP_809730.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874157|gb|EAN87879.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 272

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 74/217 (34%), Gaps = 43/217 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK------ 117
                   +EP  +T LL+++ L      +      R L++G G+G V   L        
Sbjct: 13  DPRFRRSVYEPEADTFLLLET-LDGDADVLRSMQPRRCLEIGCGSGTVITHLQLVLSGIS 71

Query: 118 --------------ESPFFKGVGVDISCKALE---IAKSNAVTNGVSE---RFDTLQSDW 157
                          +   +   VDI+  ALE   +  SN +     +          D 
Sbjct: 72  GNTNNTKEVRHVSGRTWQSEFHAVDINPVALEATGVTWSNTLRRLWGDEAPHLHLHHGDL 131

Query: 158 FSSVE------------GLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLS 204
           F   +            G FD+I+ NPPY+ +  +D L    +  D    +  GG  G  
Sbjct: 132 FGPFQHEGPEGPQEAGAGEFDLILFNPPYVPTT-MDELEGARKQGDFITAAWCGGPRGRV 190

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                   + R L+  G+C + +   Q  DV  + E 
Sbjct: 191 LVDRFILCLPRFLSARGVCYI-VAIAQ-NDVPELMEK 225


>gi|300935709|ref|ZP_07150678.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300459098|gb|EFK22591.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 257

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 51  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 110

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 111 NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 160

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 161 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 219

Query: 262 F 262
            
Sbjct: 220 A 220


>gi|310639494|ref|YP_003944252.1| methyltransferase small [Paenibacillus polymyxa SC2]
 gi|309244444|gb|ADO54011.1| Methyltransferase small [Paenibacillus polymyxa SC2]
          Length = 252

 Score = 72.4 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 25/197 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+R+  S + F    +  LL   A              +ILDL TG G V + LL    
Sbjct: 17  HNLRIIQSDEVFSFSMDAVLLARFAGIPL-------QRGKILDLCTGNGVVPI-LLTTRT 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE 176
                G++I  +  ++A+ +   NG+ +  +  + D    V     G +D I  NPPY+ 
Sbjct: 69  KASIEGIEIQPRLADMARRSVSLNGLEDAIEIREGDLRELVQITGHGAYDAITVNPPYMP 128

Query: 177 ---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
              S I       +   +   +L            +    +R +   G  S+     +  
Sbjct: 129 LNGSDIKLNPHQAIARHEVNCTL----------EEVIQACTRLVRNGGKVSMVHRPQRLA 178

Query: 234 DVVRIFESRKLFLVNAF 250
           +++ +  S  L      
Sbjct: 179 EIISLMRSYSLEPKRIR 195


>gi|332089240|gb|EGI94347.1| hypothetical protein SD15574_3021 [Shigella dysenteriae 155-74]
          Length = 219

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIES-VIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWLTQQTVRFDLIISNPPYYQQGAECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|331684225|ref|ZP_08384821.1| hypothetical protein ECOG_00701 [Escherichia coli H299]
 gi|320196411|gb|EFW71035.1| putative methyltransferase [Escherichia coli WV_060327]
 gi|331079177|gb|EGI50379.1| hypothetical protein ECOG_00701 [Escherichia coli H299]
          Length = 245

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|218701089|ref|YP_002408718.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|262828101|sp|B7NRM8|TRMN6_ECO7I RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218371075|emb|CAR18902.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli IAI39]
 gi|323188310|gb|EFZ73602.1| methyltransferase small domain protein [Escherichia coli RN587/1]
          Length = 245

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|332280097|ref|ZP_08392510.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332102449|gb|EGJ05795.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 414

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 250 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 309

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 310 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 351

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 352 ---DNVAWEMFHHARRCLKINGELYI 374


>gi|300904241|ref|ZP_07122100.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301302942|ref|ZP_07209070.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|300403774|gb|EFJ87312.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300841877|gb|EFK69637.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|315256603|gb|EFU36571.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
          Length = 219

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWVTQQTARFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|227488744|ref|ZP_03919060.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542260|ref|ZP_03972309.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227091166|gb|EEI26478.1| methyltransferase small [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227182089|gb|EEI63061.1| methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 525

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 17/139 (12%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A    L  I    V R+LDLGTG G + L+  +     +  G DIS +AL++A+     
Sbjct: 159 AASRLMLDVIPTTPVARVLDLGTGAGTLLLS--QVGHARELWGTDISQRALDLAELTLAG 216

Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            G       ++  WF  +E   FD I++NPP++ +            F+    LDG    
Sbjct: 217 AGA----HLVKGSWFEPIENERFDRIIANPPFVIAPPGAAKTYRQSTFE----LDG---- 264

Query: 203 LSHYRTIADGVSRHLNKDG 221
               R +   V  +L + G
Sbjct: 265 --ATRFVVKSVRDYLTEGG 281


>gi|256393610|ref|YP_003115174.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
 gi|256359836|gb|ACU73333.1| methyltransferase small [Catenulispora acidiphila DSM 44928]
          Length = 223

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 70/212 (33%), Gaps = 25/212 (11%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G  D      TL    F P   T        A     +        L++G+G G   +  
Sbjct: 19  GQFDLLGRSWTLLPGVFAPVHTTST------ALFSSWLPFPPGGAFLEIGSGAGVTAVTA 72

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPP 173
                      VDIS  A+    +NA  +GV++R   L SD F +++    +D I     
Sbjct: 73  ALAG-CAHVTAVDISPAAVANTAANARRHGVADRVRVLNSDLFEALDTGERYDAI----- 126

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-- 231
           Y  S ++D         + R +      G + +          L   G   +  G+N   
Sbjct: 127 YWNSNVIDAPPEFEYLEELRWAFF--DRGYATHHRFLTQGPDLLRPGGRMFL--GFNTLG 182

Query: 232 -KVDVVRIFESRKLFLVNAFK---DYGGNDRV 259
            K  +  + +   L L    +     GG  RV
Sbjct: 183 NKERLRVMADELGLELATFRRRPGVLGGI-RV 213


>gi|21221964|ref|NP_627743.1| transferase [Streptomyces coelicolor A3(2)]
 gi|256786949|ref|ZP_05525380.1| transferase [Streptomyces lividans TK24]
 gi|289770843|ref|ZP_06530221.1| transferase [Streptomyces lividans TK24]
 gi|4539563|emb|CAB38482.1| putative transferase [Streptomyces coelicolor A3(2)]
 gi|289701042|gb|EFD68471.1| transferase [Streptomyces lividans TK24]
          Length = 505

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G   L     +   +    D++ +AL I       +G     D  +
Sbjct: 163 RTPVSAALDLGTGSGIQALHAAAHA--TRVTATDVNPRALHITALTLALSGAPA-ADLRE 219

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              +  V  +  +D+IVSNPP++ S                   DGG+ G    R++   
Sbjct: 220 GSLYEPVADDETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRSLVQQ 268

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               LN+ G       +    
Sbjct: 269 TGERLNEGGFAHFLANWQHVE 289


>gi|114048824|ref|YP_739374.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7]
 gi|113890266|gb|ABI44317.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. MR-7]
          Length = 353

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 215 RVLDFGCGAGVIAAALLKAQPTLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 272

Query: 160 SVEGLFDVIVSNPPYIE 176
              G FD I+SNPP+ +
Sbjct: 273 QTSGKFDGIISNPPFHD 289


>gi|194467762|ref|ZP_03073748.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           100-23]
 gi|194452615|gb|EDX41513.1| ribosomal protein L11 methyltransferase [Lactobacillus reuteri
           100-23]
          Length = 319

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 54/223 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV----------- 98
           W+ +Y+       + +    + ++P    E L+      +                    
Sbjct: 117 WQKYYHPLRVTNQLTIVPQWEEYQPADPKEKLIFLDPGMAFGTGTHPTTRLMLEALEKTI 176

Query: 99  ---VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D+GTG+G + +A  K     K    DI   A+  AK N   N V++      +
Sbjct: 177 VGSEYVIDVGTGSGVLSIA-AKHLGAGKVDAYDIDEVAVSSAKKNLALNPVAKDVKVGIN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +    D+IV+N                      ++             +      
Sbjct: 236 SLLDGIHTQADLIVAN---------------------ILA--------EIIVPLIPQAYE 266

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLF--LVNAFKDYGG 255
           +L   G   V  I  ++   + +  + +          KD+ G
Sbjct: 267 NLKPGGKFLVSGIIDDKAPLIRQKLQEQGFIIDDEQQMKDWHG 309


>gi|153801757|ref|ZP_01956343.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122722|gb|EAY41465.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 340

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G     + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVFGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|254555737|ref|YP_003062154.1| 16S RNA methylase [Lactobacillus plantarum JDM1]
 gi|254044664|gb|ACT61457.1| 16S RNA methylase [Lactobacillus plantarum JDM1]
          Length = 202

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 70/196 (35%), Gaps = 35/196 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKE 118
           ++ + T  +  F  R      VD      L   +  D+    +LDLGTG G + +AL  +
Sbjct: 26  HSFKFTTDNGVFSKRT-----VDYGSRTLLAAFDPTDLPAGPMLDLGTGYGPIGMALAYQ 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           SP      VD++  AL +A+ N   N ++   +    D +  V    +  IV+NPP    
Sbjct: 81  SPERTVDMVDVNELALSLARKNVALNQITNT-NIFTFDVYQQVTATNYAAIVTNPP---- 135

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVV 236
                    VR             G +    +  G    L   G  +V +   Q      
Sbjct: 136 ---------VRA------------GKAVVDAMLTGAVSRLVVGGTLTVVLQKKQGAPSAK 174

Query: 237 RIFESRKLFLVNAFKD 252
           ++ ++         KD
Sbjct: 175 KLMQTTFGNCQVIKKD 190


>gi|323466690|gb|ADX70377.1| Ribosomal protein L11 methyltransferase [Lactobacillus helveticus
           H10]
          Length = 315

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 85/265 (32%), Gaps = 69/265 (26%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +        ++ LK  S+           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADRDELVKKFQDKMQELKGYSLNIGDAKITTSYIEDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALA-------------FSLPRIEKRDVVRIL 102
                L +      ++P  + + L+  D  LA               L R   +  + ++
Sbjct: 123 NFSRHLAIVPKWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAIVKKPISVV 182

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G + +A   +      +  DIS +++   + N+  N +       ++   + V+
Sbjct: 183 DVGTGSGILAIA-ASKLGATDILATDISDESMTATEQNSALNDIK-NIRVQKTSLLADVD 240

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD+IV+N                      ++             +   +  HLN+ G 
Sbjct: 241 GKFDIIVAN---------------------ILA--------EILLELIPQMDAHLNEGGQ 271

Query: 223 CSV-EIGYNQKVDVVRIFESRKLFL 246
                I Y Q   + +  +     +
Sbjct: 272 VIFSGIDYLQLPKIEKSLDENGFKI 296


>gi|160902947|ref|YP_001568528.1| methyltransferase small [Petrotoga mobilis SJ95]
 gi|160360591|gb|ABX32205.1| methyltransferase small [Petrotoga mobilis SJ95]
          Length = 225

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 30/179 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D A    + ++E  +  ++LD+G G G + ++L +E P       D++ +A++ +K   
Sbjct: 69  IDRASILLIEKVELTN-EKVLDMGCGYGVIGISLKREFPDIDLYMSDVNNRAVDFSKI-- 125

Query: 142 VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                +      Q + F   E   FDVIVSNPP +                         
Sbjct: 126 NAKNNNVNAVIKQGNLFKPWEDDYFDVIVSNPPIVA------------------------ 161

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            G      + +    HLN++G   +   +N+    +  +  +    V   +  GG  RV
Sbjct: 162 -GKEVLHELIEESYHHLNENGKIYLVAYHNKGGKALESYMEQIFGNVKELEKSGGF-RV 218


>gi|240102588|ref|YP_002958897.1| SAM-dependent rRNA adenine methyltransferase, putative
           [Thermococcus gammatolerans EJ3]
 gi|239910142|gb|ACS33033.1| SAM-dependent rRNA adenine methyltransferase, putative
           [Thermococcus gammatolerans EJ3]
          Length = 206

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLGTGTG + +   K     K   V++  KALE+AK NA  +GV    + +Q+D  S 
Sbjct: 51  VADLGTGTGVLAIG-AKLLGAEKVYAVEVDPKALEVAKRNAERSGVE--VEFIQADV-SE 106

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                D +V NPP+            ++ F+
Sbjct: 107 FSERVDTVVMNPPFGSQKKGADRPFLLKAFE 137


>gi|116618288|ref|YP_818659.1| 50S ribosomal protein L11P methyltransferase [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116097135|gb|ABJ62286.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 296

 Score = 72.1 bits (176), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 41/167 (24%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + +L   +       ET  L+  AL   +     R    ++D+GTG+G + +A  K+  
Sbjct: 128 MDPKLAFGTGV----HETTRLMIQALETVV-----RGGESMIDVGTGSGVLSVA-AKQLG 177

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESV 178
               +  DI   A+ +AK N   N V+     + SD     +++   D+IV+N       
Sbjct: 178 VAGILATDIDEMAVNVAKENLALNPVANDVTVVTSDLLESIAIDKPVDLIVAN------- 230

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          ++             +       L   G   V
Sbjct: 231 --------------ILA--------DVIERLIPQTWSRLKPGGYFLV 255


>gi|219116550|ref|XP_002179070.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409837|gb|EEC49768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 238

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 41/204 (20%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVV----------------RILDLGTGTGAVCLA 114
            +EP  +T LL+D+ L        +                     +L++G G+G     
Sbjct: 19  VYEPAEDTYLLLDALLYEFDQGNNQLAAATHATTSDSDTADQCLCHVLEIGCGSGVPTAF 78

Query: 115 LLKESPFFKGVG-----VDISCKALEIAKSNAVTNGVSER-----FDTLQSDWF----SS 160
             +     K         DI+ KAL++ +     NG          + LQ D        
Sbjct: 79  FQQMWRKRKTTLLYSVVTDINPKALKVTQQTCRCNGGGAHPQTAMLEALQCDLGFALVPQ 138

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL-NK 219
           +EG  DVI+ NPPY+ +   +    ++       +  GG+ G          ++R L   
Sbjct: 139 LEGKVDVIMFNPPYVVTDDAEVGTPDI-----SAAWAGGLGGRRVVDRALPQLARLLRKP 193

Query: 220 DGLCSVEI-----GYNQKVDVVRI 238
            G+  +        +    DV ++
Sbjct: 194 TGVLYLVTVDDNRPWELAQDVAKL 217


>gi|237706154|ref|ZP_04536635.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226899194|gb|EEH85453.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 414

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 250 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 309

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 310 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 351

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 352 ---DNVAWEMFHHARRCLKINGELYI 374


>gi|254226733|ref|ZP_04920309.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620750|gb|EAZ49108.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 340

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+    LT+ S           L    L  +LP +      +++D+G G G +   + K 
Sbjct: 166 DYQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSG----KVIDIGCGAGVLGCVMAKL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+  ++   V N +        SD FS     ++ IV+NPP+   +
Sbjct: 222 NPHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYNYIVTNPPFHSGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E                      +      HL   G   V
Sbjct: 280 ETSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|262163962|ref|ZP_06031701.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
 gi|262027490|gb|EEY46156.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus VM223]
          Length = 340

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPTLSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   + N +  R     SD FS  +  +D IV+NPP+   + 
Sbjct: 223 PNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFSDTKHKYDYIVTNPPFHSGLD 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL + G   V
Sbjct: 281 TSYSATE---------------------RLLAESVNHLTQTGSIWV 305


>gi|302559331|ref|ZP_07311673.1| transferase [Streptomyces griseoflavus Tu4000]
 gi|302476949|gb|EFL40042.1| transferase [Streptomyces griseoflavus Tu4000]
          Length = 509

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V   LDLGTG+G    AL       +    D++ +AL I       +G     +  +
Sbjct: 166 RTPVASALDLGTGSGIQ--ALHATRHVTRVTATDVNPRALHITALTLALSGAPA-AELRE 222

Query: 155 SDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
              F+ V  +  +D+IVSNPP++ S                   DGG+ G    RT+   
Sbjct: 223 GSLFTPVRDDETYDLIVSNPPFVISPGARLTYR-----------DGGMGGDDLCRTLVQE 271

Query: 213 VSRHLNKDGLCSVEIGYNQKV 233
               LN+ G       +    
Sbjct: 272 SGERLNEGGFAQFLANWQHVE 292


>gi|222153375|ref|YP_002562552.1| hypothetical protein SUB1247 [Streptococcus uberis 0140J]
 gi|222114188|emb|CAR42722.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 289

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 77/210 (36%), Gaps = 38/210 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELL-----------------VDSALAFSLPRIEKRDVVRIL 102
           F+ + + ++    +P    + L                 +DS L    P I  R +  I+
Sbjct: 22  FFAIIIAMTEIVLKPGERIDQLFSSDVQIIQNKEVFSYSIDSVLLSRFPNIPSRGL--IV 79

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DL +G GAV L         K + +++  +  E+A+ +   N + ++   +  D  + ++
Sbjct: 80  DLCSGNGAVGL-FASTKTKAKIIEIELQERLAEMAQRSIRLNQLDDQVSMICDDLKNLLD 138

Query: 163 GL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVS 214
            +     D+I+ NPPY ++       +         +   +LD           I     
Sbjct: 139 HVPRSGVDLILCNPPYFKATESSKKNISQHYLLARHELTTNLD----------EICHISR 188

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             L  +G  ++    ++ ++++       L
Sbjct: 189 HALKSNGRLAMVHRPSRFLEILDTMRKHGL 218


>gi|319425332|gb|ADV53406.1| methyltransferase small [Shewanella putrefaciens 200]
          Length = 405

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K +   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 245 DIGARIMLENLPKGNFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWA 304

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 305 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 351

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L + G+  + +G       V + R+F++ 
Sbjct: 352 --------QMFLDARRRLKEGGILHI-VGNRHLAYHVKLQRLFKNC 388


>gi|328772843|gb|EGF82881.1| hypothetical protein BATDEDRAFT_9344 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 219

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 12/162 (7%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKGVGV 127
             +EP  +T LL+D AL      +        L++G+G+G V   L  L  S     +  
Sbjct: 18  SVYEPAEDTFLLLD-ALEKDRNILLDIQPTIALEIGSGSGCVTAFLGALLGSSNTLFLCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+  A +        N +       +  S     +    DV++ NPPY+ +        
Sbjct: 77  DINDFAAKTTLKTGQANKIQIDAVITSFTSSLHQRICHNIDVLIFNPPYVVTT-----SD 131

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADG--VSRHLNKDGLCSV 225
           EV       +  GGIDG            VS+ L+K G C +
Sbjct: 132 EVGSHGIEAAWAGGIDGREVIDKFLPLVSVSQLLSKQGQCYL 173


>gi|261248387|emb|CBG26224.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 378

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|306821075|ref|ZP_07454693.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550911|gb|EFM38884.1| ribosomal protein L11 methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 319

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 51/217 (23%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL--------VDSALAFSLPRIEK------------R 96
           W+ ++NV+   +S   +P  E            +D  +AF     E             +
Sbjct: 120 WKKYFNVQKVSNSIVIKPSWEEYTPKAGEKIIDIDPGMAFGTGTHETTRMCINAIEKYMK 179

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D+G G+G + +A        K V VD+   A++++K N   NG S   D    D
Sbjct: 180 KGDSLIDIGCGSGILSIAAAHLGAQ-KVVAVDLDRLAVKVSKENVELNGFSNTIDVRYGD 238

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               ++   DVIV+N                      I+             +++ ++  
Sbjct: 239 LTDVIDEKADVIVAN---------------------IIA--------DIIAKLSENIADF 269

Query: 217 LNKDGLCS-VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +   G      I  ++K  VV   +     +V    D
Sbjct: 270 MKDGGYFISSGIINDKKDFVVSKLKENNFEIVEEKND 306


>gi|194471887|ref|ZP_03077871.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458251|gb|EDX47090.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
          Length = 378

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|118364302|ref|XP_001015373.1| Methyltransferase small domain containing protein [Tetrahymena
           thermophila]
 gi|89297140|gb|EAR95128.1| Methyltransferase small domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 257

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 38/191 (19%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-----LKESPFFKGV 125
            + P  ++ L++++    +   IE+     I+++G+G+G +   L      K       +
Sbjct: 33  VYRPNDDSYLMIEALNLEAENSIEQ--GALIVEIGSGSGILINHLVSFLDKKNKSSSLAI 90

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIESVIVD 181
            +DI+  A  + +     +    + + + +D     ++ ++G  DV++ NPPY+ +   +
Sbjct: 91  AIDINYDANILTQK-YANHYHLSQVECVNTDVAEGLYNRLKGQADVVICNPPYVPTEDEE 149

Query: 182 CLGLEVRDF--------------------DPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                 + +                    +   +  GG DG+   + + D     L  +G
Sbjct: 150 VASAYQKLYQKDKLLKEGKMEEMKKINCIEASYA--GGEDGMVVTQNMIDTSLDLLAPNG 207

Query: 222 ----LCSVEIG 228
                   E G
Sbjct: 208 SLYIFLIFENG 218


>gi|205354134|ref|YP_002227935.1| hypothetical protein SG3116 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|229564343|sp|B5REH7|RLMG_SALG2 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|205273915|emb|CAR38917.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326629254|gb|EGE35597.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 378

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|157148660|ref|YP_001455979.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895]
 gi|229470499|sp|A8APY0|RLMG_CITK8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157085865|gb|ABV15543.1| hypothetical protein CKO_04488 [Citrobacter koseri ATCC BAA-895]
          Length = 378

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 55/146 (37%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P    V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLAKNPQASVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+        L   V            
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPF---HQKHALTDNV------------ 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L  +G   +
Sbjct: 319 ------AWEMFHHARRCLKINGELYI 338


>gi|310821830|ref|YP_003954188.1| hypothetical protein STAUR_4581 [Stigmatella aurantiaca DW4/3-1]
 gi|309394902|gb|ADO72361.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 250

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 17/172 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA            R++DLGTG+G + L L K     +  G+++  +   +A+ N   N 
Sbjct: 39  LAHFAVYEAGAHRGRLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNR 98

Query: 146 VSERFDTLQSDWFS----SVEGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDG 198
             ++   +Q D          G F  ++ NPPY           +   +   +   SL  
Sbjct: 99  CEQQVTLVQGDLRQVSRLFAAGSFCHVLCNPPYRACATGRSSVMMERAIARHEVACSL-- 156

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             D       +A      L   G  S+     +  ++V +    +L      
Sbjct: 157 -PD-------VARAARHLLTPRGGLSLVYPAARFAELVAVLREHRLEPKTVR 200


>gi|260772190|ref|ZP_05881106.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14]
 gi|260611329|gb|EEX36532.1| putative methyltransferase [Vibrio metschnikovii CIP 69.14]
          Length = 377

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 35/183 (19%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D      L  + + D +  I+DLG G G + + L + +P  K + VD S  A+E AK N 
Sbjct: 215 DQGARLLLDYLPQDDTLESIIDLGCGNGVLSVKLGQLNPQAKIISVDESFMAVESAKRNL 274

Query: 142 VTNG-VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N     RF+ L ++      +     IV NPP+ +   +             I+    
Sbjct: 275 EKNLSSQHRFECLTNNCLDGFPDHSTMFIVCNPPFHQQQAITD----------HIAW--- 321

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQK-------VDVVRIFESRKLFLVN 248
                    +     R L+K G   V     +GY+ K         V  I  + K  ++ 
Sbjct: 322 --------QMFCDAKRVLSKQGKLLVIGNRHLGYDIKLKRLFGNTQVKTIASNAKFVILQ 373

Query: 249 AFK 251
           A K
Sbjct: 374 AIK 376


>gi|209759094|gb|ACI77859.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 224 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 284 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 325

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 326 ---DNVAWEMFHHARRCLKINGELYI 348


>gi|271966807|ref|YP_003341003.1| 16S rRNA m(2)G 1207 methyltransferase [Streptosporangium roseum DSM
           43021]
 gi|270509982|gb|ACZ88260.1| 16S rRNA m(2)G 1207 methyltransferase [Streptosporangium roseum DSM
           43021]
          Length = 209

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESP 120
           +++L   S  F P       VD      L  +        +LDLG G G + L +   +P
Sbjct: 32  HLKLETDSGVFSPER-----VDQGTRILLETVPPPPAEGDLLDLGCGYGPIALTMASRAP 86

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 VD++ +++E+   NA    + ++  ++  D     E  +  I SNP     +  
Sbjct: 87  GATVWAVDVNRRSVELCARNARAAAL-DKVRSVHVDEVPP-EIRYRTIWSNP--AIRIGK 142

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGL 222
             L   +  +  R++ DG    L   + + +D + R LN+ G 
Sbjct: 143 AALHEMLTRWLSRLTPDGVAY-LVVQKHLGSDSLQRWLNEQGW 184


>gi|254520552|ref|ZP_05132608.1| methyltransferase small [Clostridium sp. 7_2_43FAA]
 gi|226914301|gb|EEH99502.1| methyltransferase small [Clostridium sp. 7_2_43FAA]
          Length = 249

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 19/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   ++KR   R +DL TGTG V   L  +    + +G++I  + +E+AK ++
Sbjct: 34  VDAVLLSNFANVKKRH--RAIDLCTGTGIVPFLLYGKYKPVEVIGIEIQNEMVEMAKRSS 91

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRI 194
             N + +      +D     F +  G FDV+  NPPY  +        +   +   +   
Sbjct: 92  KYNELEDIIKFENADLKDMKFLNQLGKFDVLTVNPPYKLNNSGILNPNDKLAIARHEVLC 151

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +L            +     + L  +G   +     + +D+  +    K
Sbjct: 152 TL----------EDVIIAARKLLKDNGRMYMVHRPERLIDIFELMRKHK 190


>gi|16761992|ref|NP_457609.1| hypothetical protein STY3400 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143479|ref|NP_806821.1| hypothetical protein t3140 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213022213|ref|ZP_03336660.1| hypothetical protein Salmonelentericaenterica_05882 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
 gi|213417454|ref|ZP_03350596.1| hypothetical protein Salmonentericaenterica_05977 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213427205|ref|ZP_03359955.1| hypothetical protein SentesTyphi_17297 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213583083|ref|ZP_03364909.1| hypothetical protein SentesTyph_18488 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213616324|ref|ZP_03372150.1| hypothetical protein SentesTyp_18364 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213646099|ref|ZP_03376152.1| hypothetical protein SentesTy_01329 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852651|ref|ZP_03382183.1| hypothetical protein SentesT_07161 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825888|ref|ZP_06545048.1| hypothetical protein Salmonellentericaenterica_10825 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|81853214|sp|Q8Z3L8|RLMG_SALTI RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|25511898|pir||AB0894 conserved hypothetical protein STY3400 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504295|emb|CAD07744.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139113|gb|AAO70681.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 378

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|300820746|ref|ZP_07100896.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300526499|gb|EFK47568.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|323173107|gb|EFZ58738.1| hypothetical protein ECLT68_2521 [Escherichia coli LT-68]
 gi|324020033|gb|EGB89252.1| hypothetical protein HMPREF9542_01309 [Escherichia coli MS 117-3]
          Length = 219

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|326802972|ref|YP_004320790.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651547|gb|AEA01730.1| methyltransferase small domain protein [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 247

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 17/171 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           ++  +  S DTF    +   L   A      R+ K    +I+D  +G GA+ L +L    
Sbjct: 15  FDREIIQSDDTFSLSTDALFLAYFA------RVRKTKKQKIVDFCSGNGAIPL-ILSAMT 67

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
                 ++I  +  ++A+ +   N + E+      +  S+         ++I  NPPY +
Sbjct: 68  DAPIEAIEIQPELADMARRSVALNHLEEQITIHTGNIKSATSLVKPESVNMITCNPPYFK 127

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                 +    +      +L      ++    I       L + G   +  
Sbjct: 128 VYPDSWINPNDKK-----ALARHEIAMT-LEDIFKQSQALLKERGRLVLVH 172


>gi|325282146|ref|YP_004254688.1| tRNA (adenine-N(6)-)-methyltransferase [Odoribacter splanchnicus
           DSM 20712]
 gi|324313955|gb|ADY34508.1| tRNA (adenine-N(6)-)-methyltransferase [Odoribacter splanchnicus
           DSM 20712]
          Length = 232

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 53/156 (33%), Gaps = 12/156 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             E  +   ILD+GTGTG + L   + +   +   ++I   A   A  N   +  +ER  
Sbjct: 28  WAELEEAASILDIGTGTGLIALMAAQRNAQARIDALEIEPAACREAAYNIRISPWAERIR 87

Query: 152 TLQSDWFSSVEGL-FDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                  +    + +D I+ NPP ++ S      G  +              G   +  +
Sbjct: 88  LYPQALQAFFPAIGYDCILCNPPFFVHSTPAPDNGRSLARH----------TGTLPHTEL 137

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                R L   G   V +   +   ++       LF
Sbjct: 138 IVHAERLLTPHGKFQVILPVEEACQLIAYARRYHLF 173


>gi|242241572|ref|ZP_04796017.1| methyltransferase [Staphylococcus epidermidis W23144]
 gi|242234953|gb|EES37264.1| methyltransferase [Staphylococcus epidermidis W23144]
          Length = 241

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 62/194 (31%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + + F    +  LL            E R   +++DL +G G + L L  +S  
Sbjct: 15  GYEIIQNDEVFSFSTDALLL--------GYLTEVRKNDKVMDLCSGNGVIPLLLAAKSTQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               G++I  + + +A+ +   N +++R    + D            + ++  NPPY + 
Sbjct: 67  P-IEGIEIQEQLVSMARRSFKLNDLNDRLTMHRMDLKDVYQTFQPAQYTLVTCNPPYFKM 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L          +         L + G   +     +   
Sbjct: 126 NQNHQHQKEAHKIARHEIMCNL----------KDCIKAARHLLKEGGRFIMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTELRHGKIE 186


>gi|24372417|ref|NP_716459.1| hypothetical protein SO_0828 [Shewanella oneidensis MR-1]
 gi|24346386|gb|AAN53904.1|AE015527_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 353

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 31/130 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   LLK  P      +DI+  AL   +     NG+  +     SD  +
Sbjct: 215 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAKV--YPSDGLA 272

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIADGVSR 215
              G FD I+SNPP+                          DGL+      +      ++
Sbjct: 273 QTSGKFDGIISNPPF-------------------------HDGLASTTNIAQRFVADSAK 307

Query: 216 HLNKDGLCSV 225
            L   G+  +
Sbjct: 308 QLQSKGIWQI 317


>gi|325672686|ref|ZP_08152382.1| transferase [Rhodococcus equi ATCC 33707]
 gi|325556563|gb|EGD26229.1| transferase [Rhodococcus equi ATCC 33707]
          Length = 492

 Score = 72.1 bits (176), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 51/248 (20%), Positives = 87/248 (35%), Gaps = 22/248 (8%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
           C    ++S    +D D  +         + +   L    +    G R   +  L  S  T
Sbjct: 70  CDAADVASALSPLDIDDAVAAGLLSRDGDTVRAELDLRPLDLGTGNRWVLS-DLDGSMRT 128

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
                +  + V  A    L     R V  +LD+GTG G   L     +        D++ 
Sbjct: 129 RPTADDHVIGVGHASLSLLQGTPSRPVGTVLDVGTGCGIQALRAADYAG--TVTATDVNP 186

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +A ++  + A  NG+   F+ L+  WF  V G  FD IV+NPP++ S     +    R  
Sbjct: 187 RATDLTAATAALNGLD--FEILEGSWFEPVAGRTFDQIVANPPFVVSE--ARVVNSYR-- 240

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKL 244
                 D G+D       +    + HL   G  ++        G + +  V     +  +
Sbjct: 241 ------DSGLDLDGASELMISEAADHLAPGGTAAMLASWLHVDGEDWRHRVASWLPAHGV 294

Query: 245 FLVNAFKD 252
                 +D
Sbjct: 295 DAWIVQRD 302


>gi|168215654|ref|ZP_02641279.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           NCTC 8239]
 gi|182382073|gb|EDT79552.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           NCTC 8239]
          Length = 313

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTG+G + L +  +      +GVD+   A++ AK N   N V +  + L  
Sbjct: 176 KADTTVFDIGTGSGILAL-VASKLGAKHVIGVDLDPVAVDSAKENISFNNV-DNIEVLYG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--- 212
           +    V+G  D++V+N   I + I+  L  +V+      +L+   DG+     I      
Sbjct: 234 NLLDVVDGKADIVVAN---IIAEIICILVDDVKK-----ALN--KDGIFITSGIIHERRQ 283

Query: 213 -VSRHLNKDGLCSVEIGYN 230
            V   L ++G   +E+  +
Sbjct: 284 MVIDKLEQEGFEVMEVNKD 302


>gi|291520312|emb|CBK75533.1| Predicted O-methyltransferase [Butyrivibrio fibrisolvens 16/4]
          Length = 250

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 19/170 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++    D F         +D+ L  S  ++++ +V   LDLGTGTG + + L  ++  
Sbjct: 18  GYKIIQHPDKFCFG------MDAVLLSSFAKVKEGEVA--LDLGTGTGILPILLEAKTGG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
               G++I  ++ E+A  + + NG+ ++ D ++ D   +     +G  +V+ SNPPY+ +
Sbjct: 70  AHFTGLEIQPESAEMANRSVLLNGLEDKIDIIEGDIKEAAQIFGKGSMNVVTSNPPYMTN 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                   + +       L    D       +    S  L + G C    
Sbjct: 130 HHGLKNPNDAKAIARHELLCSLED-------VIRETSAVLKQMGRCYFVH 172


>gi|319399644|gb|EFV87898.1| methyltransferase small domain protein [Staphylococcus epidermidis
           FRI909]
          Length = 241

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + + F    +  LL            E R   +++DL +G G + L L  +S  
Sbjct: 15  GYEIIQNDEVFSFSTDALLL--------GYLTEVRKNDKVMDLCSGNGVIPLLLAAKSTQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               G++I  + + +A+ +   N +++R    + D            + ++  NPPY + 
Sbjct: 67  P-IEGIEIQEQLVSMARRSFKLNDLNDRLTMHRMDLKDVYQTFQPAQYTLVTCNPPYFKM 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L          +   +     L + G   +     +   
Sbjct: 126 NQNHQHQKEAHKIARHEIMCNL----------KDCIEAARHLLKEGGRFIMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTELRHGKIE 186


>gi|300173179|ref|YP_003772345.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887558|emb|CBL91526.1| RNA methyltransferase [Leuconostoc gasicomitatum LMG 18811]
          Length = 253

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 22/191 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L      ++ +     +DLG GTGAV L    +        V+I  +  E+AK +  
Sbjct: 34  DAILLAHFADVKGKGRGLTVDLGAGTGAVGLFYAPKVAGL-IKLVEIQPELAEMAKRSIA 92

Query: 143 TNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRI 194
            NG+ +R   LQSD    F  +  G  + ++SNPPY      +        E+   +  I
Sbjct: 93  MNGLQDRVSVLQSDMKAIFDDIQPGSAETVLSNPPYFPLNNTTKTNQDEHYELARHELTI 152

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            L G          +A   ++ L  +G   +     +  D+   F +RKL +      YG
Sbjct: 153 DLPG----------LAQVANKLLKNNGKFYMVHRPERLADIFSAFSARKLMIKRIQFVYG 202

Query: 255 GNDR---VLLF 262
            +DR   ++L 
Sbjct: 203 KSDREANMVLI 213


>gi|213053185|ref|ZP_03346063.1| hypothetical protein Salmoneentericaenterica_09800 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 378

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|168185098|ref|ZP_02619762.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|237793374|ref|YP_002860926.1| hypothetical protein CLJ_B0094 [Clostridium botulinum Ba4 str. 657]
 gi|182671844|gb|EDT83805.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|229263312|gb|ACQ54345.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 246

 Score = 72.1 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 68/169 (40%), Gaps = 21/169 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  + P I  ++  +++DL +GTG +   L  ++     +G++I  +  ++A  + 
Sbjct: 32  IDAVLLGNFPTI--KNGAKVVDLCSGTGIIPFILAGKTNASNIIGIEIQKEIADMANRSI 89

Query: 142 VTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE--SVIVDCLGLE-VRDFDPR 193
             N + ++   ++ D         +E   DV+  NPPY    + I++      +   +  
Sbjct: 90  KYNNLQKKVRFIEGDLKNLKLLKDIE-KVDVVTVNPPYKTQGTGIININDKNAISRHEIC 148

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
            +LD           +       L   G   +    ++ VD++ +    
Sbjct: 149 CTLD----------DVVKAAKVLLRDKGKLYMIHRPDRIVDIMNVMRKY 187


>gi|292669920|ref|ZP_06603346.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541]
 gi|292648717|gb|EFF66689.1| SAM-dependent methyltransferase [Selenomonas noxia ATCC 43541]
          Length = 248

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR+  R+   ILDLGTGTG +   LL      +   V+++     +A  N 
Sbjct: 34  MDAVLLAHFPRLTGRE--HILDLGTGTGVIP--LLAADGAAQITAVELNPVQAALAARNV 89

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRI 194
             NG+SE+    + D+          +FD++ +NPPY           + R     +   
Sbjct: 90  QLNGLSEKITVREGDYRDPSALFACAVFDLVFANPPYRPVASGAVSIGDGRATARHEITA 149

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRI 238
           +L          R      +  L   G  ++          V+ +
Sbjct: 150 TLA------DTVRA----AAYALRHGGRLAMVHLPERLGELVLAL 184


>gi|198244714|ref|YP_002217201.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207858477|ref|YP_002245128.1| hypothetical protein SEN3062 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|229564341|sp|B5FHV5|RLMG_SALDC RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564342|sp|B5QZ55|RLMG_SALEP RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|197939230|gb|ACH76563.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|206710280|emb|CAR34638.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326624977|gb|EGE31322.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 378

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|161616215|ref|YP_001590180.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|229564346|sp|A9N601|RLMG_SALPB RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|161365579|gb|ABX69347.1| hypothetical protein SPAB_04019 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 378

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|322373476|ref|ZP_08048012.1| methyltransferase [Streptococcus sp. C150]
 gi|321278518|gb|EFX55587.1| methyltransferase [Streptococcus sp. C150]
          Length = 254

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P+I K+ +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNREVFSYS------IDSVLLSRFPKIPKKGL--IVDLCSGNGAVGL-FTSTRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                V++  +  ++AK +   N + ++   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  APITLVELQERLADMAKRSVTLNQLEDQVTVVNDDLKNLLDHAPRSQVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 TETSKKNLSEHYLLARHEITTNL----------EEICQVARHALKSNGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           D++       L
Sbjct: 180 DIIDTMRQYNL 190


>gi|309798587|ref|ZP_07692862.1| methyltransferase [Streptococcus infantis SK1302]
 gi|308117823|gb|EFO55224.1| methyltransferase [Streptococcus infantis SK1302]
          Length = 248

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + + F         VDS L    PR  K  +  I+D   G GAV L        
Sbjct: 19  DIKIIQNREVFSYS------VDSVLLSRFPRFPKNGL--IVDFCAGNGAVGL-FASSRTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIES 177
            K + V+I  +  ++A  +   NG+ E+   +  D     + ++G   D+I+ NPPY + 
Sbjct: 70  AKILSVEIQERLADMADRSVRLNGLEEQMQVICDDLKNMPAYIQGSKVDLILCNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                L       +   +   +L          + I       L  +G  ++    ++ +
Sbjct: 130 DPNSNLNESEHYLLARHEITTNL----------KEICRSAQSILKSNGRLAMVHRPDRLL 179

Query: 234 DVVRIFESRKL 244
           D++   +   L
Sbjct: 180 DILDTLQQHNL 190


>gi|225021251|ref|ZP_03710443.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945984|gb|EEG27193.1| hypothetical protein CORMATOL_01263 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 530

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P  +  + V +A    L    +  V   LDLG G+G    AL +     +    D+  
Sbjct: 150 YAPGRDHVVGVGAASLSLLRMTCRTPVDSALDLGAGSGVQ--ALAQLGCASQVTLTDVHP 207

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDF 190
           +AL++A++     G   + + L+  WF  V G  FD IV+NPP++          ++   
Sbjct: 208 RALDMAEATLAAAGALPQTELLEGSWFEPVAGRTFDRIVANPPFVVG------PPDIA-- 259

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  D G+D     + +      HL + G+  +
Sbjct: 260 --HVYRDSGLDLDGATQLVVATAPEHLTEGGVAQL 292


>gi|82778409|ref|YP_404758.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|331654686|ref|ZP_08355686.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M718]
 gi|81242557|gb|ABB63267.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|331048068|gb|EGI20145.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M718]
          Length = 388

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 224 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 284 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 325

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 326 ---DNVAWEMFHHARRCLKINGELYI 348


>gi|16766519|ref|NP_462134.1| methyltransferase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56415159|ref|YP_152234.1| hypothetical protein SPA3088 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|167990223|ref|ZP_02571323.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168231825|ref|ZP_02656883.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168237920|ref|ZP_02662978.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168262775|ref|ZP_02684748.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168463565|ref|ZP_02697482.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168819712|ref|ZP_02831712.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194735079|ref|YP_002116177.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197364089|ref|YP_002143726.1| hypothetical protein SSPA2884 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|204928272|ref|ZP_03219472.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|238910022|ref|ZP_04653859.1| hypothetical protein SentesTe_02650 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|81521597|sp|Q8ZLX5|RLMG_SALTY RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|81821326|sp|Q5PC93|RLMG_SALPA RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470396|sp|B5BG31|RLMG_SALPK RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470397|sp|B4TVV4|RLMG_SALSV RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|16421777|gb|AAL22093.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56129416|gb|AAV78922.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194710581|gb|ACF89802.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633487|gb|EDX51901.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197095566|emb|CAR61131.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197289090|gb|EDY28459.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204322594|gb|EDZ07791.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205331276|gb|EDZ18040.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333928|gb|EDZ20692.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205343310|gb|EDZ30074.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348321|gb|EDZ34952.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|267995416|gb|ACY90301.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159772|emb|CBW19291.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914247|dbj|BAJ38221.1| hypothetical protein STMDT12_C32780 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087674|emb|CBY97438.1| putative ribosomal RNA small subunit methyltransferase D
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321225903|gb|EFX50957.1| 23S rRNA guanine-N-2- -methyltransferase rlmG [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322613623|gb|EFY10564.1| hypothetical protein SEEM315_07845 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621216|gb|EFY18074.1| hypothetical protein SEEM971_20574 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624279|gb|EFY21113.1| hypothetical protein SEEM973_20690 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627983|gb|EFY24772.1| hypothetical protein SEEM974_20600 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633101|gb|EFY29843.1| hypothetical protein SEEM201_11695 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636322|gb|EFY33030.1| hypothetical protein SEEM202_14378 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643497|gb|EFY40059.1| hypothetical protein SEEM954_04760 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647612|gb|EFY44100.1| hypothetical protein SEEM054_00625 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648594|gb|EFY45041.1| hypothetical protein SEEM675_03756 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653646|gb|EFY49972.1| hypothetical protein SEEM965_21401 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657754|gb|EFY54022.1| hypothetical protein SEEM19N_17526 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663855|gb|EFY60054.1| hypothetical protein SEEM801_03816 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669134|gb|EFY65285.1| hypothetical protein SEEM507_10761 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672873|gb|EFY68980.1| hypothetical protein SEEM877_00025 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322678137|gb|EFY74200.1| hypothetical protein SEEM867_02792 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681313|gb|EFY77346.1| hypothetical protein SEEM180_21284 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687757|gb|EFY83724.1| hypothetical protein SEEM600_15101 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323131580|gb|ADX19010.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323195569|gb|EFZ80746.1| hypothetical protein SEEM581_10365 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199750|gb|EFZ84840.1| hypothetical protein SEEM501_16925 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202502|gb|EFZ87542.1| hypothetical protein SEEM460_17515 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208010|gb|EFZ92956.1| hypothetical protein SEEM020_19120 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212438|gb|EFZ97255.1| hypothetical protein SEEM6152_09418 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215080|gb|EFZ99828.1| hypothetical protein SEEM0077_03979 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222810|gb|EGA07175.1| hypothetical protein SEEM0047_10235 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224109|gb|EGA08402.1| hypothetical protein SEEM0055_22230 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230433|gb|EGA14551.1| hypothetical protein SEEM0052_19234 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235215|gb|EGA19301.1| hypothetical protein SEEM3312_06753 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239256|gb|EGA23306.1| hypothetical protein SEEM5258_06640 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323244386|gb|EGA28392.1| hypothetical protein SEEM1156_00567 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247003|gb|EGA30969.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2009159199]
 gi|323254064|gb|EGA37884.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008282]
 gi|323256179|gb|EGA39915.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008283]
 gi|323262645|gb|EGA46201.1| hypothetical protein SEEM8284_02766 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267259|gb|EGA50743.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008285]
 gi|323269339|gb|EGA52794.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Salmonella enterica subsp. enterica serovar Montevideo
           str. IA_2010008287]
 gi|332990085|gb|AEF09068.1| putative methyltransferase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 378

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|254038254|ref|ZP_04872312.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|331643782|ref|ZP_08344913.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H736]
 gi|606022|gb|AAA57885.1| ORF_f388 [Escherichia coli str. K-12 substr. MG1655]
 gi|226839878|gb|EEH71899.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|331037253|gb|EGI09477.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H736]
          Length = 388

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 224 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 284 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 325

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 326 ---DNVAWEMFHHARRCLKINGELYI 348


>gi|13363439|dbj|BAB37389.1| putative enzyme [Escherichia coli O157:H7 str. Sakai]
 gi|209759090|gb|ACI77857.1| putative enzyme [Escherichia coli]
 gi|209759092|gb|ACI77858.1| putative enzyme [Escherichia coli]
 gi|209759096|gb|ACI77860.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 224 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 284 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 325

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 326 ---DNVAWEMFHHARRCLKINGELYI 348


>gi|227879056|ref|ZP_03996946.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|262046024|ref|ZP_06018988.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus MV-3A-US]
 gi|293381313|ref|ZP_06627316.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           214-1]
 gi|227861351|gb|EEJ68980.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           JV-V01]
 gi|260573983|gb|EEX30539.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus MV-3A-US]
 gi|290922129|gb|EFD99128.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           214-1]
          Length = 314

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 53/213 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR--------- 96
             W+ +Y+       L +  +   ++P  + + L+  D  LAF     +           
Sbjct: 113 TAWQKYYHVIDFSRHLAIVPEWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLER 172

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                + ++D+GTG+G + +A   +      +  DIS +++  AK NA  N +     T 
Sbjct: 173 AMVKPMNVVDVGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNAALNDI-NNIHTQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++   + V+G FD+IV+N                      ++             +   +
Sbjct: 231 KTSLLADVKGKFDIIVAN---------------------ILA--------EILLDLIPQM 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
             HLN DG      I Y Q   + +  +     
Sbjct: 262 DSHLNDDGQVIFSGIDYLQLPKIEKALDENGFK 294


>gi|297572074|ref|YP_003697848.1| methylase of polypeptide chain release factors-like protein
           [Arcanobacterium haemolyticum DSM 20595]
 gi|296932421|gb|ADH93229.1| methylase of polypeptide chain release factors-like protein
           [Arcanobacterium haemolyticum DSM 20595]
          Length = 368

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 16/141 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
            +E     + LDL  G G   L   K         V+I+  A  ++  NA  N + +R+ 
Sbjct: 144 HVEYLPGTKFLDLCGGPGIQGLLAAKA--GAYVESVEINPIASNVSLLNATLNNLKQRYS 201

Query: 152 TLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             +    S         +  IV+NPP +   I D                GG+DGL   +
Sbjct: 202 IHEMSLHSFSSQLQHTKYQRIVANPPLVP--IPDEFTYNRPGH-------GGVDGLQVTK 252

Query: 208 TIADGVSRHLNKDGLCSVEIG 228
           +I +   + +   G C++ IG
Sbjct: 253 SILEFAPKLIADHGTCTL-IG 272


>gi|229470431|sp|A4Y3Y0|RLMG_SHEPC RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 378

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K +   I+DLG G G + L   + SP      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLENLPKGNFKSIVDLGCGNGVLGLRTAQLSPEADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L + G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKEGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|209759088|gb|ACI77856.1| putative enzyme [Escherichia coli]
          Length = 388

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 224 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 284 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 325

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 326 ---DNVAWEMFHHARRCLKINGELYI 348


>gi|226713004|sp|Q8EIL1|RSMC_SHEON RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 342

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 31/130 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +   LLK  P      +DI+  AL   +     NG+  +     SD  +
Sbjct: 204 RVLDFGCGAGVIAATLLKAQPTLSLECIDINAMALASCELTLAANGMMAKV--YPSDGLA 261

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIADGVSR 215
              G FD I+SNPP+                          DGL+      +      ++
Sbjct: 262 QTSGKFDGIISNPPF-------------------------HDGLASTTNIAQRFVADSAK 296

Query: 216 HLNKDGLCSV 225
            L   G+  +
Sbjct: 297 QLQSKGIWQI 306


>gi|90580586|ref|ZP_01236391.1| hypothetical O-methyltransferase [Vibrio angustum S14]
 gi|90438244|gb|EAS63430.1| hypothetical O-methyltransferase [Photobacterium angustum S14]
          Length = 240

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 17/165 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF----FKGVGVDISCKALEIAKSNAVTNGVS 147
                   R++D+GTG+G + L   + +           ++I  +A   A+ N + +   
Sbjct: 31  WAAMPQQGRVVDIGTGSGLLALMAAQRTSTLALPITIEAIEIDPQAAAAARQNFINSPWH 90

Query: 148 ERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +    ++ D      +      + IV NPPY                    +     D  
Sbjct: 91  QHLQCIEQDVTEWRHTQPPNSVNAIVCNPPYFNFGQQAEQS--------HRATARHTDTF 142

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           SH + +   +   L ++G+ S+ +   +   ++       L  + 
Sbjct: 143 SH-QQLLKTLQWLLTEEGIASIILPSYEGQRLIEAAAEYHLHCIE 186


>gi|295702272|ref|YP_003595347.1| methyltransferase [Bacillus megaterium DSM 319]
 gi|294799931|gb|ADF36997.1| methyltransferase [Bacillus megaterium DSM 319]
          Length = 248

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+  S   F    +  LL   A               ++DL +G G + L L K +   
Sbjct: 19  MRIIQSPSVFSFSLDAVLLSHFAYVPIRK-------GNLVDLCSGNGVIPLFLSKRTKG- 70

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
           K +GV+I  +   +A+ +   N +  +   +  D  ++ +    G +DV+  NPPY  + 
Sbjct: 71  KIIGVEIQERLHSMAQRSIAYNQLDGQIKMIHGDLKNAPQELGYGQYDVVTCNPPYFTTS 130

Query: 179 IVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             + +       +   +   SL            +    S+ + + G  ++     + +D
Sbjct: 131 NKEEINENEHFAIARHEIHCSL----------EDVIRASSQLVKQGGKVALVHRPGRLLD 180

Query: 235 VVRIFESRKL 244
           +V +    +L
Sbjct: 181 IVTLMRQYRL 190


>gi|309791823|ref|ZP_07686310.1| methyltransferase small [Oscillochloris trichoides DG6]
 gi|308226145|gb|EFO79886.1| methyltransferase small [Oscillochloris trichoides DG6]
          Length = 195

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             RILDLG G G + + + +  P    V  D    A+  A++NA  N V      L S  
Sbjct: 52  PQRILDLGCGCGVIAITMAQRFPEAAVVAADKDLLAVRYARANAQLNAVPH-VQILGSVG 110

Query: 158 FSSVE-GLFDVIVSNPP 173
             SV  G +D+I SN P
Sbjct: 111 LESVPAGPYDLIFSNIP 127


>gi|168243053|ref|ZP_02667985.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194450232|ref|YP_002047257.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|200387845|ref|ZP_03214457.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|229564344|sp|B4TIU8|RLMG_SALHS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|194408536|gb|ACF68755.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|199604943|gb|EDZ03488.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205337838|gb|EDZ24602.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 378

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|114048720|ref|YP_739270.1| methyltransferase small [Shewanella sp. MR-7]
 gi|123326200|sp|Q0HRP2|TRMN6_SHESR RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|113890162|gb|ABI44213.1| methyltransferase small [Shewanella sp. MR-7]
          Length = 236

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G G+G + L +  +    +   V++  KA    + N   +  ++R  
Sbjct: 29  WAPLAEAKNILDIGAGSGLLSL-MAAQRSQGQITAVELEEKAAAACRYNMTQSPWAKRCQ 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D       +  +G FD I+ NPPY E              +   ++    + L   
Sbjct: 88  LVHGDIQHVCQLAQYQGYFDHIICNPPYFEHGPKAS--------EQHRAMARHTETLGFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + D +S+ L+ +G  S+ +                LFLV 
Sbjct: 140 -PLLDAISQCLSFEGYASLILPIQSLARFKACLNDTALFLVR 180


>gi|312870597|ref|ZP_07730711.1| ribosomal protein L11 methyltransferase [Lactobacillus oris
           PB013-T2-3]
 gi|311093872|gb|EFQ52202.1| ribosomal protein L11 methyltransferase [Lactobacillus oris
           PB013-T2-3]
          Length = 320

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 40/198 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETEL--------------------------LVDSALA 87
           +  W+ +Y+     +  T  P+ E                             L+  AL 
Sbjct: 114 VTAWQKYYHPLRVTNELTIVPQWEDYTPEQESEKLLYLDPGMAFGTGTHPTTRLMLQALE 173

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +     R    ++D+GTG+G + +A  K+    + V  D+   A+E AK N   N V+
Sbjct: 174 QVI-----RGGESLIDVGTGSGVLSIA-AKQLGADQVVAYDVDDVAVESAKKNLALNPVA 227

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGIDGLSHY 206
                  +     +    D+IV+N   +  +IV  +     +  P  + L  G       
Sbjct: 228 SDVKIGVNSLLDGIHTQVDIIVAN--ILAEIIVPLIPQAYENLKPGGLFLTSG-----II 280

Query: 207 RTIADGVSRHLNKDGLCS 224
              A  + + LN+ G   
Sbjct: 281 DDKAALIRKKLNEQGFII 298


>gi|289706441|ref|ZP_06502799.1| methyltransferase small domain protein [Micrococcus luteus SK58]
 gi|289556936|gb|EFD50269.1| methyltransferase small domain protein [Micrococcus luteus SK58]
          Length = 215

 Score = 71.7 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 9/152 (5%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLK 117
           +    R+TL +      P+    +D   A  L  +         LD+G G G + L L  
Sbjct: 27  ELAGRRVTLQTANGVFSPDG---IDKGTAALLSAVPAPPARGAFLDVGAGWGPLALTLAL 83

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            SP  +  GV+++ ++L +A+ NA   G S     L  +     +  FD++ SNPP    
Sbjct: 84  ASPEAEVTGVEVNERSLALARDNAAAVGAS-NARFLTPEQVPD-DARFDLVWSNPPI--R 139

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           +    L   +  + PR++  GG   L   + +
Sbjct: 140 IGKAALHDLLAQWLPRLAP-GGEAWLVVQKNL 170


>gi|328474334|gb|EGF45139.1| putative methyltransferase [Vibrio parahaemolyticus 10329]
          Length = 385

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 36/202 (17%)

Query: 54  ILGW-RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAV 111
           I  W  +  +++L    + +     +   +D    F L  I +   +  I+DLG G G +
Sbjct: 190 ITAWGVEGEHIQLKNLPNVY-----SGESLDLGARFMLQHIPQDASINHIIDLGCGNGVL 244

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIV 169
            +   + +P  +   VD S  ALE AK N + N    R    + ++     +    D+I+
Sbjct: 245 SVKAGQLNPNVRVTCVDESFMALESAKQNLLDNLGEGRDIQCVANNCLDGFKPDSCDLIM 304

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE--- 226
            NPP+ +   +             I+             +     + LN++G   V    
Sbjct: 305 CNPPFHQQQAITD----------HIAW-----------QMFCDAKQILNQNGKLLVIGNR 343

Query: 227 -IGYNQKVDVVRIFESRKLFLV 247
            +GY+    + R+F  + + L+
Sbjct: 344 HLGYD--AKLKRLFGDKNVKLI 363


>gi|225550392|ref|ZP_03771341.1| methyltransferase family protein [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
 gi|225379546|gb|EEH01908.1| methyltransferase family protein [Ureaplasma urealyticum serovar 2
           str. ATCC 27814]
          Length = 262

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +  +   ++L++GT   A+ + L           ++I  +A+++A  N 
Sbjct: 29  VDTVLLANFISLSSK-TKKVLEIGTNNAALSIFLASRKEDMNIDAIEIQSEAIDLALLNV 87

Query: 142 VTNGVSERFDTLQSDW------FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             N + ++ + + +D+      F  +E   +D I+ NPP+ +    D +    +   P  
Sbjct: 88  KENHLEKQINIIHADFNEYWKTFDKIENNKYDAIICNPPFYKQ---DKIIPSTKK--PLQ 142

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L      L+    I  G ++ + +    ++ I   + VD++ +    + 
Sbjct: 143 TLALYEIALNF-EQIMQGCAKIIKQKANLAMVIPTTRLVDLLEMMRKYQF 191


>gi|197262741|ref|ZP_03162815.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197240996|gb|EDY23616.1| methyltransferase family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
          Length = 378

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|20093502|ref|NP_613349.1| RNA methylase [Methanopyrus kandleri AV19]
 gi|19886334|gb|AAM01279.1| Predicted RNA methylase [Methanopyrus kandleri AV19]
          Length = 204

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   L     R    +  R+LDLG GTG + +         +   V++  KA+E+A+ N 
Sbjct: 32  IVRVLLSIADREFGLECSRVLDLGAGTGRIGIGAALAGA-CEVTCVEVDSKAVEVARRNV 90

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPY 174
              GV +R + +++D      E  +DV + NPP+
Sbjct: 91  KRAGVEDRVEVVEADVRDFEPEDQYDVTIMNPPF 124


>gi|49474444|ref|YP_032486.1| ribosomal protein L11 methyltransferase [Bartonella quintana str.
           Toulouse]
 gi|49239948|emb|CAF26353.1| Ribosomal protein l11 methyltransferase [Bartonella quintana str.
           Toulouse]
          Length = 289

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++  +    LDLGTG+G + + +    P    +  DI   A+ IA+ N   NG
Sbjct: 139 LEMIAKVMQNENPQNALDLGTGSGILAIGIAMLKP-ISVLASDIDPIAIRIAQHNIELNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V +    + +  F+  E      FD+IV+N   + + +++ +   V              
Sbjct: 198 VKKYITAVTAKSFNHDEIISRAPFDLIVAN--ILANPLIELMQEMV-------------- 241

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                        + L K G   +  I   Q   V+  +  + L  +  +
Sbjct: 242 -------------QALQKGGSLILSGILEEQHAHVLETYIKQGLKHIETY 278


>gi|312883994|ref|ZP_07743711.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368452|gb|EFP95987.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 340

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 27/167 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++ ++ L + S           +    L  +LP I+     ++LD G G G +   + K 
Sbjct: 166 EYRDMSLIIRSLPGVFSHGEFDVGSQLLLDNLPDIDG----KVLDFGCGAGVIGCVIAKL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+  +++    N ++       SD +S     +  IVSNPP+   +
Sbjct: 222 NPDIELEMCDISALAVASSQATLERNQLNGNVFA--SDVYSDTGSDYHFIVSNPPFHAGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E                     ++      HL  +G   +
Sbjct: 280 ETSYSATE---------------------SLLGNSPSHLKSNGTILI 305


>gi|119470498|ref|ZP_01613201.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7]
 gi|119446199|gb|EAW27476.1| hypothetical protein ATW7_11806 [Alteromonadales bacterium TW-7]
          Length = 233

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 11/146 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+GTGTG + L   +  P      V+I   A   A  N   +         Q+    + 
Sbjct: 40  LDIGTGTGLLALMCKQRRPALSITAVEIDENAYNQALQNVANSPWPNIAIKHQTIQSFNS 99

Query: 162 EGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +  FDVI+SNPPY    +  +                   DGLS    + +   R  +  
Sbjct: 100 DAPFDVIISNPPYFNHSLKGNNAARNTARH---------TDGLSF-EELINVFKRLSHSQ 149

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFL 246
              S+ +   + +  + +   + L+L
Sbjct: 150 SRFSLILPNTEALVFIELATQKGLYL 175


>gi|332532819|ref|ZP_08408692.1| putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037665|gb|EGI74116.1| putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 380

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 25/141 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFD 151
           E      I+DLG G G V L  L   P      VD S  A+E A+ N   N     +  +
Sbjct: 227 ETPKAKSIIDLGCGNGVVGLMTLARCPNASVTFVDESYMAVESARLNVEINLGDKFDNCE 286

Query: 152 TLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            +++D  +  E    D+++ NPP+ ++         V D                   + 
Sbjct: 287 FIENDCLTGFERDSVDMVLCNPPFHQA-------QAVTDH--------------IAWQMF 325

Query: 211 DGVSRHLNKDGLCSVEIGYNQ 231
                 L + G   + IG   
Sbjct: 326 KQAKDTLKEGGELRI-IGNRH 345


>gi|322412124|gb|EFY03032.1| Methyltransferase [Streptococcus dysgalactiae subsp. dysgalactiae
           ATCC 27957]
          Length = 284

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  S D F         +DS L    P++  + +  I+DL +G GAV L        
Sbjct: 45  DVRIIQSMDVFSYS------IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTK 95

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
              V V++  +  ++ + +   N + ++   +  D    +        D+I+ NPPY +S
Sbjct: 96  ATIVEVELQERLADMGRRSIQLNQLEDQVTMICDDLKYLLNHVPHSRVDLILCNPPYFKS 155

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  +         +   +L            I       L  +G  ++    ++ +
Sbjct: 156 HESSKKNVSEHYLLARHEITTNL----------EEICQVARHALKSNGRLAMVHRPDRFL 205

Query: 234 DVVRIFESRKLFLVNA 249
           +++    +  L     
Sbjct: 206 EIIDSLRANGLAPKRV 221


>gi|257417546|ref|ZP_05594540.1| methyltransferase [Enterococcus faecalis AR01/DG]
 gi|257159374|gb|EEU89334.1| methyltransferase [Enterococcus faecalis ARO1/DG]
          Length = 202

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 43/216 (19%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +          R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-GNLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDV 167
           G + L+L   +       VD++ +A+ +A+ NA  N ++   D   S+ + ++ E  +  
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRNQIT-TVDIHSSNVYETLNETTYAA 128

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           IVSNPP                            G      I  G    L   G  +V I
Sbjct: 129 IVSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVI 163

Query: 228 GYNQKV-----DVVRIF-------ESRKLFLVNAFK 251
              Q        +  +F       + +  +++ + K
Sbjct: 164 QKKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 199


>gi|218690691|ref|YP_002398903.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
 gi|262828117|sp|B7MYK8|TRMN6_ECO81 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|218428255|emb|CAR09174.2| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Escherichia coli ED1a]
          Length = 245

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 98

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+++SNPPY +          E   +    +LD        +
Sbjct: 99  NVHTADILQWITQQTVRFDLVISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 149 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|119719756|ref|YP_920251.1| methyltransferase small [Thermofilum pendens Hrk 5]
 gi|119524876|gb|ABL78248.1| methyltransferase small [Thermofilum pendens Hrk 5]
          Length = 207

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 57  WRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +  F  + L +    F P    +  LV   L  S            +++GTG G + L  
Sbjct: 20  FARFLGLTLLVPPGCFTPIGTYSTWLVSRVLEAS------PSAEVAVEVGTGVGTLALLA 73

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV-SNPPY 174
            K   +   VGV++S   L  AK+NA  N +    D +  D  S +      +V +NPPY
Sbjct: 74  AKRGAYA--VGVEVSEPCLRAAKANARRNSLDGLLDFVLCDAGSCLRSSSAGLVFTNPPY 131

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +         + V          GG D LS ++ +     R     
Sbjct: 132 LPVDSEKPEDVPV---------AGGSD-LSIFKKMLVNAVRIAKPG 167


>gi|258512679|ref|YP_003186113.1| methyltransferase small [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479405|gb|ACV59724.1| methyltransferase small [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 199

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 31/163 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      +  ++       LDLG G G V   L +  P  +   +D++ +A+E+A+ N  
Sbjct: 42  DEGTRRLIESVDLTGAASALDLGCGYGPVTAILARVYPGVQWWMIDVNRRAVELARRNTA 101

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              V +             E  FD ++ NPP                            G
Sbjct: 102 DL-VPQPVVLQHDGIPPDFEFQFDHVLLNPPIRA-------------------------G 135

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIFE 240
            +    + +   R L   G   V I            +  +FE
Sbjct: 136 KATVFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVKLRELFE 178


>gi|313124042|ref|YP_004034301.1| o-methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
           ND02]
 gi|312280605|gb|ADQ61324.1| Predicted O-methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 336

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E I  +LG +    +++     +F    +T LL   A          ++  R+++L +
Sbjct: 6   ENERIDYMLGEQ----LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSRVVELCS 55

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G  A  L +           V++    +  A+ +   N + +R    Q +   +     +
Sbjct: 56  GNAAASLYMA-AFNKAHYDDVELQEDMVSKARRSVELNDMQDRITVYQGNVKDAGSFLRK 114

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +DV+V NPPY ++     L  +    +   +  I+L            I    +  L 
Sbjct: 115 DSYDVVVVNPPYFKAPAGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLK 164

Query: 219 KDGLCSVEI 227
             G   +  
Sbjct: 165 MKGKMFMVH 173


>gi|321474913|gb|EFX85877.1| hypothetical protein DAPPUDRAFT_208793 [Daphnia pulex]
          Length = 530

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 11/124 (8%)

Query: 50  SIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-VVRILDL 104
               I+G          +  ++S   F    +   L    L   +  I + D    ILD+
Sbjct: 312 PPEHIMGSTHLVEKLCGLEFSISPLAFF---QVNTLAAEVLFNKIAEIAEIDSNTNILDV 368

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             GTG + L+L K+    +  GV++   A+E A+SNA  NG++     +       V  L
Sbjct: 369 CCGTGTIGLSLAKKCR--RVYGVELVESAVEDARSNASKNGITNCV-FVAGKAEDEVNNL 425

Query: 165 FDVI 168
            D I
Sbjct: 426 IDGI 429


>gi|254450580|ref|ZP_05064017.1| methyltransferase small [Octadecabacter antarcticus 238]
 gi|198264986|gb|EDY89256.1| methyltransferase small [Octadecabacter antarcticus 238]
          Length = 253

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 78/214 (36%), Gaps = 27/214 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLTL   T   R      VD  L  +  R +      +LDLG GTGA  L L    
Sbjct: 12  FLGGRLTLEQPTKGYRAG----VDPVLLAAAVRAQAGQ--SVLDLGCGTGAALLCLATRV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEG-LFDVIVSNPPYIES 177
                 GV++  +  ++ + NA  N +          D  S +    FD ++ NPPY + 
Sbjct: 66  SGLALHGVEVQPRYADLCRVNATANNIDTTIWTADLRDLPSDLRALTFDHVMVNPPYFKR 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +   L  RD    I+  G            D  +R L   G  ++     +   +  
Sbjct: 126 SSGNSSPLPDRD----IAFAGDT----ATVNWIDTATRRLKPKGTLTMI---QKADRLPD 174

Query: 238 IFES--RKLFLVNAFKDYGGN-----DRVLLFCR 264
           +  +   +L  +N +    G      DR++L  R
Sbjct: 175 LLRAIDERLGAINVYP-ITGRDGRAADRIILRAR 207


>gi|330952368|gb|EGH52628.1| hypothetical protein PSYCIT7_13539 [Pseudomonas syringae Cit 7]
          Length = 166

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +    P  +   VDI+ KAL  A++NA   G+    +   SD  S + G FD+IV+NPPY
Sbjct: 3   IAVARPQAQVHAVDINPKALHFAQTNAAVAGLK-NMECCHSDILSGLNGNFDLIVANPPY 61

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           +     D      R         G   G      I       L   G   +  G
Sbjct: 62  M----KDTRQRAYRH-------GGDALGADLSVRILHESLDRLTPGGSLVLYTG 104


>gi|227891210|ref|ZP_04009015.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
 gi|227867084|gb|EEJ74505.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
          Length = 203

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 29/157 (18%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  ++      D  +ILD+G G G + L++ K  P  +   VD++  ALE+AK     N
Sbjct: 48  VLLETIDTNLDLDNKKILDMGCGYGPIGLSIAKAYPNSQVDMVDVNELALELAKK-NAAN 106

Query: 145 GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                 +  +S  +  +    +D+I++NPP                            G 
Sbjct: 107 NNINNVEIFKSSQYEDINETDYDLIITNPPIRA-------------------------GK 141

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVVRI 238
                I  G  +HLN  G     I   Q     + ++
Sbjct: 142 DVVHGILAGSKQHLNSGGSIVAVIQKKQGAPSAIKKL 178


>gi|225387403|ref|ZP_03757167.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
           DSM 15981]
 gi|225046448|gb|EEG56694.1| hypothetical protein CLOSTASPAR_01156 [Clostridium asparagiforme
           DSM 15981]
          Length = 184

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +     LDLGTGTG + + L  ++P     G++I  ++ ++A+ +   N + E+ + +  
Sbjct: 59  KPGETALDLGTGTGIIPILLEAKTPGRHFTGLEIQQESADMARRSVAYNRLEEKVEIVTG 118

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRT 208
           D   +        FDV+ SNPPY+ S        + +     +   +L            
Sbjct: 119 DIKEAGRLFKLASFDVVTSNPPYMNSAHGLKNPGDAKAIARHEVLCTL----------ED 168

Query: 209 IADGVSRHLNKDGLCS 224
           +    ++ L   G   
Sbjct: 169 VIREGAKVLRPMGRFY 184


>gi|223933343|ref|ZP_03625331.1| methyltransferase small [Streptococcus suis 89/1591]
 gi|302024241|ref|ZP_07249452.1| methyltransferase [Streptococcus suis 05HAS68]
 gi|223897993|gb|EEF64366.1| methyltransferase small [Streptococcus suis 89/1591]
          Length = 249

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 72/188 (38%), Gaps = 20/188 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +      + R      +DS L    P++  +  + I+DL +G GAV L         + 
Sbjct: 16  FSTDVQIIQNREVFSYSIDSVLLSRFPKMPAQKGL-IVDLCSGNGAVGL-FASTRTKAQI 73

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
           + V++  +  ++ + +   NG+ E+   +  D  +     +    D+++ NPPY +    
Sbjct: 74  MQVELQERLADMNRRSIALNGLEEQVSVINDDLANLPQYDLRSKVDLMLCNPPYFKVDKD 133

Query: 181 DCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
             L       +   +   +LD           I     + L  +G  ++    ++ +D++
Sbjct: 134 SNLNESEHYLLARHEIATNLDS----------ICQVAQQVLKSNGRLAMVHRPDRFLDIL 183

Query: 237 RIFESRKL 244
               + KL
Sbjct: 184 DKLRTYKL 191


>gi|323968023|gb|EGB63435.1| gyfiC [Escherichia coli M863]
 gi|327252285|gb|EGE63957.1| methyltransferase small domain protein [Escherichia coli STEC_7v]
          Length = 245

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 39  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELEGEAATQAQENINQSPWAERI 98

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 99  NIYPADIQQWITQQTARFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 148

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++    +  + ++G   V +          +       L     D   N+     RVLL
Sbjct: 149 QSLLTCAAECITEEGFFCVVLPEQIGNGFTELALRMGWHL-RLRTDVAENETRQPHRVLL 207

Query: 262 F 262
            
Sbjct: 208 A 208


>gi|307708382|ref|ZP_07644848.1| methyltransferase [Streptococcus mitis NCTC 12261]
 gi|307615481|gb|EFN94688.1| methyltransferase [Streptococcus mitis NCTC 12261]
          Length = 216

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 21/171 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    PR  K+ +  I+D   G GAV L         + + V+I  +  ++A+ + 
Sbjct: 1   MDSVLLSRFPRFPKKGL--IVDFCAGNGAVGL-FASTRTQAQILAVEIQERLADMAERSV 57

Query: 142 VTNGVSERFDTLQSDW---FSSVEG-LFDVIVSNPPYIESVIVDCLGLE----VRDFDPR 193
             NG+ E+ + +  D     + ++G   D+I+ NPPY +      L       +   +  
Sbjct: 58  RLNGLEEQMEVICDDLKNMPAYIQGSKVDMILCNPPYFKVDPHSNLNESEHYLLARHEIT 117

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +L          + I       L  +G  ++    ++ +D++   +   L
Sbjct: 118 TNL----------QEICRSAQSILKSNGRLAMVHRPDRLLDILDTLQRHNL 158


>gi|295692844|ref|YP_003601454.1| ribosomal protein l11 methyltransferase [Lactobacillus crispatus
           ST1]
 gi|312977234|ref|ZP_07788982.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           CTV-05]
 gi|295030950|emb|CBL50429.1| Ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           ST1]
 gi|310895665|gb|EFQ44731.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           CTV-05]
          Length = 314

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 53/213 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR--------- 96
             W+ +Y+       L +  +   ++P  + + L+  D  LAF     +           
Sbjct: 113 TAWQKYYHVIDFSRHLAIVPEWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLER 172

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                + ++D+GTG+G + +A   +      +  DIS +++  AK NA  N +     T 
Sbjct: 173 AMVKPMNVVDVGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNAALNDI-NNIHTQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++   + V+G FD+IV+N                      ++             +   +
Sbjct: 231 KTSLLADVKGKFDIIVAN---------------------ILA--------EILLDLIPQM 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
             HLN DG      I Y Q   + +  +     
Sbjct: 262 DSHLNDDGQVIFSGIDYLQLPKIEKALDENGFK 294


>gi|256843050|ref|ZP_05548538.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus 125-2-CHN]
 gi|256614470|gb|EEU19671.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           crispatus 125-2-CHN]
          Length = 314

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 53/213 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR--------- 96
             W+ +Y+       L +  +   ++P  + + L+  D  LAF     +           
Sbjct: 113 TAWQKYYHVIDFSRHLAIVPEWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLER 172

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                + ++D+GTG+G + +A   +      +  DIS +++  AK NA  N +     T 
Sbjct: 173 AMVKPMNVVDVGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNAALNDI-NNIHTQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++   + V+G FD+IV+N                      ++             +   +
Sbjct: 231 KTSLLADVKGKFDIIVAN---------------------ILA--------EILLDLIPQM 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
             HLN DG      I Y Q   + +  +     
Sbjct: 262 DSHLNDDGQVIFSGIDYLQLPKIEKALDENGFK 294


>gi|220927646|ref|YP_002504555.1| methyltransferase small [Clostridium cellulolyticum H10]
 gi|219997974|gb|ACL74575.1| methyltransferase small [Clostridium cellulolyticum H10]
          Length = 196

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 7/113 (6%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++   S   F P+      +D      L   + ++  ++LDLG G G V +   K     
Sbjct: 16  MKFKTSGKVFSPQN-----IDRGTLAMLSLADFKEGDKVLDLGCGYGVVGILASKIVGPE 70

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
             +  D+   A+++A  NA+ N V +    L+SD F  ++   F +I+SNPPY
Sbjct: 71  NVIMTDVDENAIKLAIENALINSV-DSIKILKSDGFKELKESGFSIILSNPPY 122


>gi|115378992|ref|ZP_01466123.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|115363996|gb|EAU63100.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
          Length = 228

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 17/172 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA            R++DLGTG+G + L L K     +  G+++  +   +A+ N   N 
Sbjct: 17  LAHFAVYEAGAHRGRLIDLGTGSGIIPLVLAKRLGLREVTGLELQPRLYSLAERNVYLNR 76

Query: 146 VSERFDTLQSDWFS----SVEGLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRISLDG 198
             ++   +Q D          G F  ++ NPPY           +   +   +   SL  
Sbjct: 77  CEQQVTLVQGDLRQVSRLFAAGSFCHVLCNPPYRACATGRSSVMMERAIARHEVACSL-- 134

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             D       +A      L   G  S+     +  ++V +    +L      
Sbjct: 135 -PD-------VARAARHLLTPRGGLSLVYPAARFAELVAVLREHRLEPKTVR 178


>gi|328850496|gb|EGF99660.1| hypothetical protein MELLADRAFT_40156 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 11/162 (6%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESPFFKGVG 126
           D +EP  +T +L+D AL   L  ++    +  +++G+G+G V +    +L   P      
Sbjct: 17  DVYEPAEDTFILLD-ALEADLDFLKALRPLICVEIGSGSGCVSVFAQKILSGIPTLHI-C 74

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184
            DI+ KAL +  S    N +S   + +++   +S  ++   D+++ NPPY+E+   +   
Sbjct: 75  TDINAKALTVTNSTFQKNSLSTP-NLVRTSLLNSLRLQSSVDLLLFNPPYVETSTEEYEQ 133

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSV 225
                 +   +  GG +G+     + D +   L+ + G+  +
Sbjct: 134 ATQGHIEASWA--GGANGMELTNQLLDSLPSILSPNRGVLYL 173


>gi|319404497|emb|CBI78103.1| ribosomal protein L11 methyltransferase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 289

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      I+  +    LD+GTG+G + + +    P    +  DI   A+++A+ N   NG
Sbjct: 139 LEMITKVIQNENPKNALDIGTGSGILAIGIAMLKPIV-VLAADIDPIAIKVAQQNIRFNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V++    +    FS  +      FD+IV+N   + + +++                    
Sbjct: 198 VTDYVTAITITGFSDNKVASRAPFDLIVAN--ILANPLIE-------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  + + L K G   +  I   Q  DV++ +  + L  +  +
Sbjct: 236 -------LAHNMVQALRKGGSIILSGIIEEQHDDVLKAYVKQGLKHIETY 278


>gi|308066857|ref|YP_003868462.1| hypothetical protein PPE_00022 [Paenibacillus polymyxa E681]
 gi|305856136|gb|ADM67924.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 251

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 26/197 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+R+  S + F    +  LL   A              +ILDL TG G V L LL    
Sbjct: 17  HNLRIIQSDEVFSFSMDAVLLARFA--------GIPQRGKILDLCTGNGVVPL-LLTTRT 67

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIE 176
                G++I  +  ++A+ +   NG+       + D    V     G++D I  NPPY+ 
Sbjct: 68  KASIEGIEIQPRLADMARRSVSLNGLESAIQIREGDLRELVHITGHGVYDAITVNPPYMP 127

Query: 177 ---SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
              S I       +   +   +L            +    +R +   G  S+     +  
Sbjct: 128 LNGSDIKLNPHQAIARHEVNCTL----------EEVIQASTRLVRNGGKVSMVHRPQRLG 177

Query: 234 DVVRIFESRKLFLVNAF 250
           +++ +  +  L      
Sbjct: 178 EIITLMRNHSLEPKRIR 194


>gi|197119799|ref|YP_002140226.1| O-methyltransferase [Geobacter bemidjiensis Bem]
 gi|197089159|gb|ACH40430.1| O-methyltransferase, putative [Geobacter bemidjiensis Bem]
          Length = 258

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 25/197 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y++R+      +    +  LL D A          R   R +DLGTG G + L L +   
Sbjct: 26  YDLRIIQPRHGYRFSVDPLLLADFA--------GVRTGERCVDLGTGCGVIALLLARLGE 77

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
                 ++      +IA  N + NG+S+R + ++ D  S     +   FD++VSNPPY  
Sbjct: 78  NASVAAIEFQQVMAQIAARNVMMNGLSDRVEVVEEDVVSVKSRFLVDSFDLVVSNPPYRR 137

Query: 177 SVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                      RD    +   +L    D               +   G   +    ++  
Sbjct: 138 PGTGKVSPRAGRDDSRHESTAAL---SD-------FLAAAKYLVKPSGRICLIYHTSRLA 187

Query: 234 DVVRIFESRKLFLVNAF 250
           +++     +KL  +   
Sbjct: 188 ELMAQAAHQKLAPLRLR 204


>gi|300937979|ref|ZP_07152761.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
 gi|300457020|gb|EFK20513.1| methyltransferase small domain protein [Escherichia coli MS 21-1]
          Length = 378

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|256850298|ref|ZP_05555727.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           MV-1A-US]
 gi|256712935|gb|EEU27927.1| ribosomal protein L11 methyltransferase [Lactobacillus crispatus
           MV-1A-US]
          Length = 314

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 53/213 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+       L +  +   ++P  + + L+      +L     +           
Sbjct: 113 TAWQKYYHVIDFSRHLAIVPEWEDYKPAFKDQQLIKLDPGLALGTGNHKTTQLAMMGLER 172

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                + ++D+GTG+G + +A   +      +  DIS +++  AK NA  N +     T 
Sbjct: 173 AMVKPMNVVDVGTGSGILAIA-ASKLGATDVLATDISDESMTAAKQNAALNDI-NNIHTQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++   + V+G FD+IV+N                      ++             +   +
Sbjct: 231 KTSLLADVKGKFDIIVAN---------------------ILA--------EILLDLIPQM 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
             HLN DG      I Y Q   + +  +     
Sbjct: 262 DSHLNDDGQVIFSGIDYLQLPKIEKALDENGFK 294


>gi|320353479|ref|YP_004194818.1| methyltransferase small [Desulfobulbus propionicus DSM 2032]
 gi|320121981|gb|ADW17527.1| methyltransferase small [Desulfobulbus propionicus DSM 2032]
          Length = 261

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 6/97 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ LA        R   R+LDLG G G + L L         V +++  +   + + N+
Sbjct: 40  VDAVLAAHFAA--PRAGERLLDLGCGCGVIGLILAHRHAHIAVVSLELQEELAALTEENS 97

Query: 142 VTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPY 174
             NG  +R   ++ D  +          D +V NPPY
Sbjct: 98  RLNGFGDRLRVVRGDVRTVGEVLPPESVDWVVCNPPY 134


>gi|319654963|ref|ZP_08009037.1| hypothetical protein HMPREF1013_05659 [Bacillus sp. 2_A_57_CT2]
 gi|317393388|gb|EFV74152.1| hypothetical protein HMPREF1013_05659 [Bacillus sp. 2_A_57_CT2]
          Length = 246

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 73/207 (35%), Gaps = 22/207 (10%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           + E +  +L      ++R+  S   F    +  LL                   ++DL +
Sbjct: 6   EGERLDYLLAE----DLRIIQSPAVFSFSLDAVLLARFVYVPI-------QKGNLIDLCS 54

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---- 162
           G G + L L   +      GV+I  +  ++A  +   N +  R + ++ D     +    
Sbjct: 55  GNGVIPLFLSTRTKGA-ITGVEIQERLHDMAVRSIEYNKLQGRIEMIRGDIKEIHQVLGY 113

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FDV+  NPPY  +   +    E+ + +  +++      L          S    + G 
Sbjct: 114 GKFDVVTCNPPYFPTPSRE----EINENE-HLAIARHEI-LCTLEDAIKASSGLAKQGGK 167

Query: 223 CSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +      + +D+V +    KL     
Sbjct: 168 VAFVHRPGRFLDIVTLMRKYKLEPKRV 194


>gi|324119690|gb|EGC13571.1| methyltransferase small domain-containing protein [Escherichia coli
           E1167]
          Length = 378

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|162458775|ref|NP_001104941.1| methionine S-methyltransferase [Zea mays]
 gi|50401093|sp|Q8W519|MMT1_MAIZE RecName: Full=Methionine S-methyltransferase; AltName:
           Full=AdoMet:Met S-methyltransferase
 gi|13786624|gb|AAD34585.2| S-adenosyl-L-methionine:L-methionine S-methyltransferase [Zea mays]
          Length = 1091

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            + G++    + +      F P   +    +            +    + +LG G G + 
Sbjct: 82  HVQGFQQMKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDSIFRDK---TVAELGCGNGWIS 138

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDW 157
           +AL ++    K  G+DI+ +A++IA  N   N +                +R +  +SD 
Sbjct: 139 IALAEKWCPSKVYGLDINPRAVKIAWINLYLNALDDDGLPIYDGEGKTLLDRVEFYESDL 198

Query: 158 FS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRI-------SLDGGID---G 202
            S     +   D IV   P I +   + +   V +   +  +       +L G ++   G
Sbjct: 199 LSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFLYALSNYCALQGFVEDQFG 258

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           L       +     +   G+    +G    Q V   R+F  R   +   ++
Sbjct: 259 LGLIARAVEEGISVIKPSGIMVFNMGGRPGQGV-CERLFRRRGFRITKLWQ 308


>gi|215488413|ref|YP_002330844.1| predicted methyltransferase small domain [Escherichia coli O127:H6
           str. E2348/69]
 gi|215266485|emb|CAS10924.1| predicted methyltransferase small domain [Escherichia coli O127:H6
           str. E2348/69]
          Length = 378

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPESLDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|296418756|ref|XP_002838991.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634985|emb|CAZ83182.1| unnamed protein product [Tuber melanosporum]
          Length = 372

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 33/152 (21%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            LL+     F+ P  EK    RILD+GTGTG   + + ++ P  + +  D+S       +
Sbjct: 119 YLLMTGGSLFAAPLDEKNPPQRILDIGTGTGIWAVDIAEQFPSAEVIATDLSPI-----Q 173

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N V   +    D  Q DW    +  FD I           V  L   ++D+D       
Sbjct: 174 PNWVPPNLRFEIDDAQDDWTWG-DETFDYI----------HVRGLLGSIKDWD------- 215

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLC-SVEIGY 229
                     +      HL   G   +VE  Y
Sbjct: 216 ---------RLLRQAFTHLKPGGWLEAVEHDY 238


>gi|237785654|ref|YP_002906359.1| putative transferase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237758566|gb|ACR17816.1| putative transferase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 533

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 25/190 (13%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  + V +A    L       V  +LDLGTG+G     + +          D+S +AL 
Sbjct: 154 PDHVVGVGAASRSLLQATGTSRVGSVLDLGTGSGVQI--MGQWGRADSVTATDVSPRALL 211

Query: 136 IAKSNAVTNGVSE------RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVR 188
            A++      V        + +  Q  WF  V    FD I++NPP++           +R
Sbjct: 212 FAEATCAAADVVSTAESRTKVEFKQGSWFDPVRNQTFDRIIANPPFVVG------PPTLR 265

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQK--VDVVRIFESR 242
                +  D G++       +  G+  HL   G   V        +Q     V       
Sbjct: 266 ----HVYRDSGMELDGATAKLVRGIPEHLAAHGQACVLGAWIHSDDQAWQARVASWIPDH 321

Query: 243 KLFLVNAFKD 252
                   +D
Sbjct: 322 GYRAWVLERD 331


>gi|195440654|ref|XP_002068155.1| GK12558 [Drosophila willistoni]
 gi|194164240|gb|EDW79141.1| GK12558 [Drosophila willistoni]
          Length = 612

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 19/143 (13%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-------SIHRILGWRDF----YNVRLTL 67
             ++    +  +D    +  ++   + +KH         +  +LG          ++  +
Sbjct: 339 KEELKTFYEQQVDPDSPYKCSSLYYQDVKHREAGQMVNPVEHLLGSTHITDTIQGLQFRI 398

Query: 68  SSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           S   F         +L   A+  + P  +      +LD+  GTG + L+  K     K +
Sbjct: 399 SPLAFFQINTEGANVLYQKAIDLAAPTKDS----TVLDICCGTGTIALSFAKHCK--KVL 452

Query: 126 GVDISCKALEIAKSNAVTNGVSE 148
           GV+I   A++ A+ NA  NG+  
Sbjct: 453 GVEIVPDAIKDAEFNAEANGIKN 475


>gi|94501355|ref|ZP_01307875.1| ribosomal RNA small subunit methyltransferase C [Oceanobacter sp.
           RED65]
 gi|94426468|gb|EAT11456.1| ribosomal RNA small subunit methyltransferase C [Oceanobacter sp.
           RED65]
          Length = 335

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 48/172 (27%), Gaps = 31/172 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + ++   R+LD G G G +   + +     +   +D    A++ A+    
Sbjct: 176 DKGTEVLLKNLPRKIKGRVLDFGCGAGVIGCYVQQHREVDEIDMLDDDLLAVKSAQRTIE 235

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    +   S+ F  VE  ++ I+SNPP+            V+              
Sbjct: 236 KNSIPY-AEAFASNGFDEVEDRYNWIISNPPF---------HQGVKTH------------ 273

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGY---------NQKVDVVRIFESRKLF 245
                        HL   G   +                  V  +       
Sbjct: 274 YEVTEQFLAKAKDHLKLSGKLLIVANEFLSYEVILKYHFKMVKEVARENGFK 325


>gi|255657495|ref|ZP_05402904.1| hypothetical protein CdifQCD-2_17756 [Clostridium difficile
           QCD-23m63]
 gi|296449091|ref|ZP_06890881.1| SAM-dependent methyltransferase [Clostridium difficile NAP08]
 gi|296879914|ref|ZP_06903887.1| SAM-dependent methyltransferase [Clostridium difficile NAP07]
 gi|296262184|gb|EFH08989.1| SAM-dependent methyltransferase [Clostridium difficile NAP08]
 gi|296429203|gb|EFH15077.1| SAM-dependent methyltransferase [Clostridium difficile NAP07]
          Length = 248

 Score = 71.7 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 20/153 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +  +I+K    +++DLGTGTG + + +  +S   K +GV+I     E+A  + 
Sbjct: 30  IDAVLLANFTKIKKD--AKVVDLGTGTGIIPILIAGKSEAKKIIGVEIQEDVYEMATRSV 87

Query: 142 VTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPY--IESVIVDCLGLEVRDFDPRI 194
             NG+ ER + +  D         V G + V+ SNPPY  I+ +        +   + R 
Sbjct: 88  KLNGLEERVEIINEDIKYIDKVLDVNG-YHVVTSNPPYMHIDGIKNPNDKKAISRHEVRC 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L            +    SR +   G   +  
Sbjct: 147 NL----------EDVIRAASRLVMSRGKFLMIH 169


>gi|328863963|gb|EGG13062.1| hypothetical protein MELLADRAFT_32299 [Melampsora larici-populina
           98AG31]
          Length = 222

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 15/164 (9%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA---LLKESPFFKGVG 126
           D +EP  +T +L+D AL   L  ++    +  +++G+G+G V +    +L   P      
Sbjct: 17  DVYEPAEDTFILLD-ALEADLDFLKALKPLICVEIGSGSGCVSVFAQKILSGIPTLHI-C 74

Query: 127 VDISCKALEIA----KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
            DI+ KAL +     + N+++     R   L S     ++   D+++ NPPY+E+   + 
Sbjct: 75  TDINSKALTVTDSTFQKNSLSTPNLVRTSLLNSL---RLQSSVDLLLFNPPYVETSTEEF 131

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GLCSV 225
                   +   +  GG +G+     + D +   L+ + G+  +
Sbjct: 132 EQATQGHIEASWA--GGANGMELTNQLLDSLPSILSPNRGVLYL 173


>gi|191166840|ref|ZP_03028665.1| methyltransferase family protein [Escherichia coli B7A]
 gi|193061934|ref|ZP_03043030.1| methyltransferase family protein [Escherichia coli E22]
 gi|193067296|ref|ZP_03048264.1| methyltransferase family protein [Escherichia coli E110019]
 gi|194427684|ref|ZP_03060231.1| methyltransferase family protein [Escherichia coli B171]
 gi|209920555|ref|YP_002294639.1| hypothetical protein ECSE_3364 [Escherichia coli SE11]
 gi|218555652|ref|YP_002388565.1| putative methyltransferase small domain [Escherichia coli IAI1]
 gi|218696788|ref|YP_002404455.1| putative methyltransferase small domain [Escherichia coli 55989]
 gi|260845896|ref|YP_003223674.1| putative methyltransferase small domain [Escherichia coli O103:H2
           str. 12009]
 gi|300821681|ref|ZP_07101827.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300905770|ref|ZP_07123504.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|301301870|ref|ZP_07208004.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|307310293|ref|ZP_07589941.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|309793651|ref|ZP_07688077.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|312972651|ref|ZP_07786824.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1827-70]
 gi|331669892|ref|ZP_08370737.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA271]
 gi|331679159|ref|ZP_08379831.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H591]
 gi|190903082|gb|EDV62806.1| methyltransferase family protein [Escherichia coli B7A]
 gi|192932154|gb|EDV84752.1| methyltransferase family protein [Escherichia coli E22]
 gi|192959253|gb|EDV89688.1| methyltransferase family protein [Escherichia coli E110019]
 gi|194414192|gb|EDX30467.1| methyltransferase family protein [Escherichia coli B171]
 gi|209913814|dbj|BAG78888.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218353520|emb|CAU99651.1| putative methyltransferase small domain [Escherichia coli 55989]
 gi|218362420|emb|CAR00044.1| putative methyltransferase small domain [Escherichia coli IAI1]
 gi|257761043|dbj|BAI32540.1| predicted methyltransferase small domain [Escherichia coli O103:H2
           str. 12009]
 gi|300402369|gb|EFJ85907.1| methyltransferase small domain protein [Escherichia coli MS 84-1]
 gi|300525819|gb|EFK46888.1| methyltransferase small domain protein [Escherichia coli MS 119-7]
 gi|300842851|gb|EFK70611.1| methyltransferase small domain protein [Escherichia coli MS 124-1]
 gi|306909188|gb|EFN39683.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli W]
 gi|308122608|gb|EFO59870.1| methyltransferase small domain protein [Escherichia coli MS 145-7]
 gi|310332593|gb|EFP99806.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1827-70]
 gi|315062390|gb|ADT76717.1| predicted methyltransferase small domain [Escherichia coli W]
 gi|315257000|gb|EFU36968.1| methyltransferase small domain protein [Escherichia coli MS 85-1]
 gi|320201994|gb|EFW76569.1| putative enzyme [Escherichia coli EC4100B]
 gi|323163134|gb|EFZ48967.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           E128010]
 gi|323183033|gb|EFZ68431.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1357]
 gi|323377022|gb|ADX49290.1| methyltransferase small [Escherichia coli KO11]
 gi|323941819|gb|EGB37998.1| methyltransferase small domain-containing protein [Escherichia coli
           E482]
 gi|323946847|gb|EGB42865.1| methyltransferase small domain-containing protein [Escherichia coli
           H120]
 gi|324018195|gb|EGB87414.1| methyltransferase small domain protein [Escherichia coli MS 117-3]
 gi|331062805|gb|EGI34719.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA271]
 gi|331073224|gb|EGI44547.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H591]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|269103477|ref|ZP_06156174.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163375|gb|EEZ41871.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 339

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 28/171 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            F +  ++++      R    +      D      L  + +    ++LD G G G +   
Sbjct: 158 WFRSYPISIAGVELTVRSLPGVFSHGEFDKGSELLLNNLPQLHG-KVLDFGCGAGVIGAV 216

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +  + P       DIS  A+E AK     N ++  F    +D + ++ G +  ++SNPP+
Sbjct: 217 MKAKYPEIDVELCDISALAIESAKETFKVNNLTGSFTA--TDVYKTLTGPYQFLISNPPF 274

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       ++ F             +           +L ++G   +
Sbjct: 275 HAG---------LKTF------------YAATENFIAQAPEYLAENGQLVI 304


>gi|323359328|ref|YP_004225724.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
 gi|323275699|dbj|BAJ75844.1| 16S RNA G1207 methylase RsmC [Microbacterium testaceum StLB037]
          Length = 367

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 46/143 (32%), Gaps = 22/143 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +        +DL  GTG V   L    P  + +  D S  A+  A++ A 
Sbjct: 209 DIGTRMLLAHLPAPAGDEAIDLACGTGIVAATLATRHPSLRVLACDQSAIAVASARATAE 268

Query: 143 TNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NGV++R   ++ D   S  +     I  NPP+     V                    D
Sbjct: 269 ANGVADRVTVVRDDMLGSHADDSAAFIALNPPFHSGAAV-------------------TD 309

Query: 202 GLSHYRTIADGVSRHLNKDGLCS 224
           G      +    +R L   G   
Sbjct: 310 G--IAPRMFADAARALRPGGELW 330


>gi|300818852|ref|ZP_07099058.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
 gi|300528637|gb|EFK49699.1| methyltransferase small domain protein [Escherichia coli MS 107-1]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|291284462|ref|YP_003501280.1| hypothetical protein G2583_3808 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290764335|gb|ADD58296.1| Putative enzyme [Escherichia coli O55:H7 str. CB9615]
 gi|320656144|gb|EFX24056.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661834|gb|EFX29242.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O55:H7 str. USDA 5905]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|331648887|ref|ZP_08349975.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M605]
 gi|330909150|gb|EGH37664.1| 23S rRNA (guanine-N-2-) -methyltransferase rlmG [Escherichia coli
           AA86]
 gi|331042634|gb|EGI14776.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli M605]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|300898310|ref|ZP_07116658.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300927701|ref|ZP_07143269.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300951706|ref|ZP_07165526.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300958784|ref|ZP_07170896.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1]
 gi|301024862|ref|ZP_07188499.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|301648339|ref|ZP_07248079.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|300314532|gb|EFJ64316.1| hypothetical protein HMPREF9547_04475 [Escherichia coli MS 175-1]
 gi|300357972|gb|EFJ73842.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|300396393|gb|EFJ79931.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300449068|gb|EFK12688.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300464254|gb|EFK27747.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|301073615|gb|EFK88421.1| conserved hypothetical protein [Escherichia coli MS 146-1]
          Length = 219

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|256376433|ref|YP_003100093.1| methylase [Actinosynnema mirum DSM 43827]
 gi|255920736|gb|ACU36247.1| methylase [Actinosynnema mirum DSM 43827]
          Length = 218

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 15/159 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              + P+ +TELL     A SL          +LD  TGT          +   +   VD
Sbjct: 11  PGVYRPQEDTELL-----ARSLAESGVPHGATVLDACTGT-GALAVAAGRAGAGEVTAVD 64

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
            S +A+  A  N + +GV  R      D FS+V G +DV+ SNPPY+ +          R
Sbjct: 65  RSRRAVAAAFVNCLLHGVPVRVR--HGD-FSTVGGRYDVVCSNPPYVPAPGPPDPTGAAR 121

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                 + D G DG +    +   +   L   G   V  
Sbjct: 122 ------AWDAGADGRAVLDRLCAALPSLLAPGGFGLVVH 154


>gi|218706708|ref|YP_002414227.1| putative methyltransferase small domain [Escherichia coli UMN026]
 gi|293406695|ref|ZP_06650621.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1412]
 gi|298382438|ref|ZP_06992035.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1302]
 gi|331664698|ref|ZP_08365603.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA143]
 gi|218433805|emb|CAR14722.1| putative methyltransferase small domain [Escherichia coli UMN026]
 gi|291426701|gb|EFE99733.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1412]
 gi|298277578|gb|EFI19094.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           FVEC1302]
 gi|331057946|gb|EGI29928.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA143]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|146292038|ref|YP_001182462.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|145563728|gb|ABP74663.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella putrefaciens
           CN-32]
          Length = 402

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K +   I+DLG G G + L   + SP      +D S  A+  AK+N  
Sbjct: 242 DIGARIMLENLPKGNFKSIVDLGCGNGVLGLRTAQLSPEADIHFIDDSEMAVASAKANWA 301

Query: 143 TNGV-SERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +++      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 302 RNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITD----------HIAW--- 348

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L + G+  + +G       V + R+F++ 
Sbjct: 349 --------QMFLDARRRLKEGGILHI-VGNRHLAYHVKLQRLFKNC 385


>gi|314968697|gb|EFT12795.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA1]
          Length = 362

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|256819836|ref|YP_003141115.1| methyltransferase small [Capnocytophaga ochracea DSM 7271]
 gi|256581419|gb|ACU92554.1| methyltransferase small [Capnocytophaga ochracea DSM 7271]
          Length = 240

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 66/157 (42%), Gaps = 12/157 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G GTG + L L + S       V+I  KA      N   +   +R  
Sbjct: 29  WTPIENPKSILDIGAGTGLLSLMLAQRSDAPVIDAVEIDEKAYIECTENFEESQWGDRLF 88

Query: 152 TLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              + +      ++ ++D+I+SNPP+  +        + +  +   +     D LS    
Sbjct: 89  CYHASFQEFALEIDEVYDLIISNPPFYTA--------DYKTAEKARNTARFTDTLSFSE- 139

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           + +GVS+ L  +G+ SV + Y++    + +     LF
Sbjct: 140 LLEGVSQLLTDEGVFSVILPYSETEGFIALASGYGLF 176


>gi|15803625|ref|NP_289658.1| putative enzyme [Escherichia coli O157:H7 EDL933]
 gi|12517671|gb|AAG58217.1|AE005538_4 putative enzyme [Escherichia coli O157:H7 str. EDL933]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|325684219|gb|EGD26395.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 314

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 53/212 (25%)

Query: 57  WRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       L +  +   ++P  + + ++               + LA        
Sbjct: 115 WQKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 174

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              + + D+GTG+G + +A   +      +  DIS +++  AK NA  NG+ +     ++
Sbjct: 175 VKPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAKENAALNGIQD-IALQKT 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + V+G FD+IV+N                      ++             +   +  
Sbjct: 233 SLLAGVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDS 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           HL++DG      I Y Q   + +        +
Sbjct: 264 HLSEDGQVIFSGIDYLQLPKIEQALAENGFQI 295


>gi|324112071|gb|EGC06049.1| methyltransferase small domain-containing protein [Escherichia
           fergusonii B253]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|314981759|gb|EFT25852.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA3]
 gi|315092521|gb|EFT64497.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA4]
          Length = 362

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++  +  A  N ++              
Sbjct: 225 VDLGCGNGVIYAHLARLLPQATIHATDVSWQAVDSTRLTAQANQLNI-VTHWCDGLVDVP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 HESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|293416522|ref|ZP_06659161.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B185]
 gi|291431878|gb|EFF04861.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B185]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|115461615|ref|NP_001054407.1| Os05g0105000 [Oryza sativa Japonica Group]
 gi|46359907|gb|AAS88839.1| putative methionine S-methyltransferase [Oryza sativa Japonica
           Group]
 gi|52353600|gb|AAU44166.1| putative methionine S-methyltransferase [Oryza sativa Japonica
           Group]
 gi|113577958|dbj|BAF16321.1| Os05g0105000 [Oryza sativa Japonica Group]
 gi|215768183|dbj|BAH00412.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629893|gb|EEE62025.1| hypothetical protein OsJ_16807 [Oryza sativa Japonica Group]
          Length = 1084

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 97/309 (31%), Gaps = 64/309 (20%)

Query: 1   MQALRDSHSFL--CRVTGLSSHQ-----VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR 53
           M A  +  SFL  C  +G  +       V+              L  A+ R         
Sbjct: 1   MAAAAEVESFLATCAASG-DAAYGAAKAVLERLQDPASRPDARRLLGAVRRRFAG-PAA- 57

Query: 54  ILGWRDFYNVRLTLSSDTFEPR---------------PETELLVDSALAFSLPRIEKRDV 98
             G   F      +     +P                P   +  D +  F        D 
Sbjct: 58  --GEECFRTFHFRIHDVVLDPHLRGFQQRKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDS 115

Query: 99  V----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------- 147
           +     + +LG G G + +AL ++    K  G+DI+ +A++IA  N   N +        
Sbjct: 116 IFRDKTVAELGCGNGWISIALAEKWSPSKVYGLDINPRAVKIAWINLYLNALDDDGLPIY 175

Query: 148 --------ERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRI 194
                   +R +  +SD  S     +   D IV   P I +   + +   V +   +  +
Sbjct: 176 DGEGKTLLDRVEFYESDLLSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFL 235

Query: 195 -------SLDGGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESR 242
                  +L G ++   GL       +     +   G+    +G    Q V   R+F  R
Sbjct: 236 YSLSNYCALQGFVEDQFGLGLIARAVEEGISVIKPMGIMIFNMGGRPGQGV-CERLFRRR 294

Query: 243 KLFLVNAFK 251
              +   ++
Sbjct: 295 GFRITKLWQ 303


>gi|314959626|gb|EFT03728.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA1]
          Length = 359

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 222 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 280

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 281 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 319

Query: 222 LCSV 225
               
Sbjct: 320 TLWC 323


>gi|301021894|ref|ZP_07185855.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
 gi|300397810|gb|EFJ81348.1| methyltransferase small domain protein [Escherichia coli MS 69-1]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|154684553|ref|YP_001419714.1| YabB [Bacillus amyloliquefaciens FZB42]
 gi|154350404|gb|ABS72483.1| YabB [Bacillus amyloliquefaciens FZB42]
          Length = 247

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 73/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S           I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGNIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G V L LL         GV+I  +  ++A  +   NG+  +   +  D  +  E      
Sbjct: 57  GIVPL-LLSTRSKADITGVEIQERLYDMALRSVEYNGLGGQISLIHDDLKNMPERLGHNK 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          L   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKEAEQNLNEHLRIARHEILCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYRIE 190


>gi|113969137|ref|YP_732930.1| methyltransferase small [Shewanella sp. MR-4]
 gi|122944086|sp|Q0HM44|TRMN6_SHESM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|113883821|gb|ABI37873.1| methyltransferase small [Shewanella sp. MR-4]
          Length = 236

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G G+G + L +  +    +   V++  KA    + N   +  ++R  
Sbjct: 29  WAPLAEAKNILDIGAGSGLLSL-MAAQRSQGQITAVELEEKAAAACRYNMTQSPWAKRCQ 87

Query: 152 TLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D       +  +G FD I+ NPPY E              +   ++    + L   
Sbjct: 88  LVHGDIQSVCQLAQYQGYFDHIICNPPYFEHGPKAS--------EQHRAMARHTETLGFT 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + D +S+ L+ +G  S+ +                L+LV 
Sbjct: 140 -PLLDAISQCLSFEGYASLILPIQSLARFKACLNDTALYLVR 180


>gi|319407489|emb|CBI81138.1| ribosomal protein L11 methyltransferase [Bartonella sp. 1-1C]
          Length = 289

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      I+  +    LDLGTG+G + + +    P    +  DI   A+++A+ N   NG
Sbjct: 139 LEMITKVIQNENPKNALDLGTGSGILAIGIAMLKPIV-VLAADIDPIAIKVAQQNIRFNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V++    +    FS  +      FD+IV+N   + + +++                    
Sbjct: 198 VTDYVTAITITGFSDNKVASRAPFDLIVAN--ILANPLIE-------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  + + L K+G   +  I   Q  DV++ +  + L  +  +
Sbjct: 236 -------LAHNMVQALRKNGSIILSGIIEEQHDDVLKAYVKQGLKHIETY 278


>gi|89109853|ref|AP_003633.1| predicted methyltransferase small domain [Escherichia coli str.
           K-12 substr. W3110]
 gi|90111535|ref|NP_417555.4| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli
           str. K-12 substr. MG1655]
 gi|170018665|ref|YP_001723619.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|170082626|ref|YP_001731946.1| methyltransferase small subunit [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188495269|ref|ZP_03002539.1| methyltransferase family protein [Escherichia coli 53638]
 gi|194439803|ref|ZP_03071869.1| methyltransferase family protein [Escherichia coli 101-1]
 gi|218701855|ref|YP_002409484.1| putative methyltransferase small domain [Escherichia coli IAI39]
 gi|238902194|ref|YP_002927990.1| putative methyltransferase small domain protein [Escherichia coli
           BW2952]
 gi|253772081|ref|YP_003034912.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163030|ref|YP_003046138.1| putative methyltransferase small domain protein [Escherichia coli B
           str. REL606]
 gi|256024337|ref|ZP_05438202.1| predicted methyltransferase small domain protein [Escherichia sp.
           4_1_40B]
 gi|297518031|ref|ZP_06936417.1| predicted methyltransferase small domain protein [Escherichia coli
           OP50]
 gi|300931972|ref|ZP_07147269.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|300950699|ref|ZP_07164590.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300958475|ref|ZP_07170613.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|301025125|ref|ZP_07188718.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|301644786|ref|ZP_07244761.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|307139771|ref|ZP_07499127.1| predicted methyltransferase small domain protein [Escherichia coli
           H736]
 gi|9911104|sp|P42596|RLMG_ECOLI RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470493|sp|B1XG88|RLMG_ECODH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470496|sp|B1IRN3|RLMG_ECOLC RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|85675884|dbj|BAE77134.1| predicted methyltransferase small domain [Escherichia coli str. K12
           substr. W3110]
 gi|87082206|gb|AAC76119.2| 23S rRNA mG1835 methyltransferase, SAM-dependent [Escherichia coli
           str. K-12 substr. MG1655]
 gi|169753593|gb|ACA76292.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli ATCC 8739]
 gi|169890461|gb|ACB04168.1| predicted methyltransferase small domain [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188490468|gb|EDU65571.1| methyltransferase family protein [Escherichia coli 53638]
 gi|194421251|gb|EDX37272.1| methyltransferase family protein [Escherichia coli 101-1]
 gi|218371841|emb|CAR19696.1| putative methyltransferase small domain [Escherichia coli IAI39]
 gi|238862672|gb|ACR64670.1| predicted methyltransferase small domain protein [Escherichia coli
           BW2952]
 gi|242378632|emb|CAQ33420.1| 23S rRNA m[2]G1835 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253323125|gb|ACT27727.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974931|gb|ACT40602.1| predicted methyltransferase small domain protein [Escherichia coli
           B str. REL606]
 gi|253979087|gb|ACT44757.1| predicted methyltransferase small domain protein [Escherichia coli
           BL21(DE3)]
 gi|260447882|gb|ACX38304.1| rRNA (guanine-N(2)-)-methyltransferase [Escherichia coli DH1]
 gi|299880177|gb|EFI88388.1| methyltransferase small domain protein [Escherichia coli MS 196-1]
 gi|300314871|gb|EFJ64655.1| methyltransferase small domain protein [Escherichia coli MS 175-1]
 gi|300449995|gb|EFK13615.1| methyltransferase small domain protein [Escherichia coli MS 116-1]
 gi|300460395|gb|EFK23888.1| methyltransferase small domain protein [Escherichia coli MS 187-1]
 gi|301076940|gb|EFK91746.1| methyltransferase small domain protein [Escherichia coli MS 146-1]
 gi|309703514|emb|CBJ02854.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli ETEC H10407]
 gi|315137676|dbj|BAJ44835.1| putative methyltransferase small domain protein [Escherichia coli
           DH1]
 gi|315617160|gb|EFU97769.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           3431]
 gi|323935916|gb|EGB32211.1| methyltransferase small domain-containing protein [Escherichia coli
           E1520]
 gi|323961047|gb|EGB56663.1| methyltransferase small domain-containing protein [Escherichia coli
           H489]
 gi|323970149|gb|EGB65422.1| methyltransferase small domain-containing protein [Escherichia coli
           TA007]
 gi|332345040|gb|AEE58374.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           UMNK88]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|313621128|gb|EFR92190.1| methyltransferase small domain-containing protein [Listeria innocua
           FSL S4-378]
          Length = 257

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 75/205 (36%), Gaps = 22/205 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           + +  E +  +L      N+R+  S   F         +D+ L      +  R   +I+D
Sbjct: 12  KLIDDERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIID 60

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           L +G G + L LL      + VGV+I  +  ++AK +   N + ++ + ++ D     + 
Sbjct: 61  LCSGNGIIPL-LLSTRTKAQIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLNHITDL 119

Query: 163 ---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                 D++  NPPY  +             +         + +          +  L +
Sbjct: 120 IPKERADIVTCNPPYFATPSTS------LKNENEHYRIARHEIMCTLEDTIRVAASLLKQ 173

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKL 244
            G  +      + +D++ +    +L
Sbjct: 174 GGKANFVHRPERLLDIIDLMRKYRL 198


>gi|309785397|ref|ZP_07680028.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 1617]
 gi|229470428|sp|Q32BN8|RLMG_SHIDS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|308926517|gb|EFP71993.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 1617]
 gi|325499864|gb|EGC97723.1| Ribosomal RNA large subunit methyltransferase G [Escherichia
           fergusonii ECD227]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|218691387|ref|YP_002399599.1| putative methyltransferase small domain [Escherichia coli ED1a]
 gi|306816563|ref|ZP_07450695.1| putative methyltransferase small domain [Escherichia coli NC101]
 gi|331659376|ref|ZP_08360318.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA206]
 gi|331674628|ref|ZP_08375387.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA280]
 gi|218428951|emb|CAR09755.1| putative methyltransferase small domain [Escherichia coli ED1a]
 gi|281180137|dbj|BAI56467.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|305850128|gb|EFM50587.1| putative methyltransferase small domain [Escherichia coli NC101]
 gi|315297785|gb|EFU57059.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|323188470|gb|EFZ73755.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           RN587/1]
 gi|324008839|gb|EGB78058.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
 gi|331053958|gb|EGI25987.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA206]
 gi|331068067|gb|EGI39463.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli TA280]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|110643328|ref|YP_671058.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 536]
 gi|170684079|ref|YP_001745354.1| methyltransferase family protein [Escherichia coli SMS-3-5]
 gi|123147664|sp|Q0TD22|RLMG_ECOL5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564327|sp|B1LFI2|RLMG_ECOSM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|110344920|gb|ABG71157.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 536]
 gi|170521797|gb|ACB19975.1| methyltransferase family protein [Escherichia coli SMS-3-5]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|38704140|ref|NP_311993.2| hypothetical protein ECs3966 [Escherichia coli O157:H7 str. Sakai]
 gi|168749324|ref|ZP_02774346.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754059|ref|ZP_02779066.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168762041|ref|ZP_02787048.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769496|ref|ZP_02794503.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168773255|ref|ZP_02798262.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781222|ref|ZP_02806229.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168785962|ref|ZP_02810969.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168797679|ref|ZP_02822686.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195937230|ref|ZP_03082612.1| hypothetical protein EscherichcoliO157_12376 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809571|ref|ZP_03251908.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208814358|ref|ZP_03255687.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208819645|ref|ZP_03259965.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399561|ref|YP_002272557.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217326995|ref|ZP_03443078.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795035|ref|YP_003079872.1| putative methyltransferase small domain-containing protein
           [Escherichia coli O157:H7 str. TW14359]
 gi|261228096|ref|ZP_05942377.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254952|ref|ZP_05947485.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. FRIK966]
 gi|229470492|sp|B5YRC4|RLMG_ECO5E RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470503|sp|Q8XAK8|RLMG_ECO57 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|187770938|gb|EDU34782.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016428|gb|EDU54550.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189000973|gb|EDU69959.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358404|gb|EDU76823.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361441|gb|EDU79860.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367603|gb|EDU86019.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374118|gb|EDU92534.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379623|gb|EDU98039.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208729372|gb|EDZ78973.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735635|gb|EDZ84322.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208739768|gb|EDZ87450.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160961|gb|ACI38394.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217319362|gb|EEC27787.1| methyltransferase family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594435|gb|ACT73796.1| predicted methyltransferase small domain protein [Escherichia coli
           O157:H7 str. TW14359]
 gi|320189436|gb|EFW64095.1| putative enzyme [Escherichia coli O157:H7 str. EC1212]
 gi|320640157|gb|EFX09729.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H7 str. G5101]
 gi|320666985|gb|EFX33961.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326337788|gb|EGD61622.1| putative enzyme [Escherichia coli O157:H7 str. 1125]
 gi|326347353|gb|EGD71078.1| putative enzyme [Escherichia coli O157:H7 str. 1044]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|58337232|ref|YP_193817.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           NCFM]
 gi|227903815|ref|ZP_04021620.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           ATCC 4796]
 gi|81311476|sp|Q5FKI8|PRMA_LACAC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|58254549|gb|AAV42786.1| methyltransferase [Lactobacillus acidophilus NCFM]
 gi|227868702|gb|EEJ76123.1| ribosomal protein L11 methyltransferase [Lactobacillus acidophilus
           ATCC 4796]
          Length = 314

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 86/264 (32%), Gaps = 68/264 (25%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +      A +  LK   +           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADKDELVEKFQAKLEELKSYGLNTGEGKITTSYIEDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR------------DVVRILD 103
                L +  +   ++P    + L+  D  LAF     +                + ++D
Sbjct: 123 DFSRHLAIVPEWEDYQPAFSDQQLIKLDPGLAFGTGNHKTTQLAMMGIERAMVKPMSVVD 182

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+G + +A   +      +  DIS +++  AK N+  N ++      ++   + VEG
Sbjct: 183 VGTGSGILAIA-ASKLGATNVLATDISDESMTAAKQNSALNNLT-NIKVQKTSLLAGVEG 240

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD+IV+N                      ++             +   +  HLNKDG  
Sbjct: 241 KFDIIVAN---------------------ILA--------EILLDLIPQMDAHLNKDGQV 271

Query: 224 SV-EIGYNQKVDVVRIFESRKLFL 246
               I Y Q   + +  +     +
Sbjct: 272 IFSGIDYLQLPKIKKSLDENNFKI 295


>gi|300361913|ref|ZP_07058090.1| O-methyltransferase [Lactobacillus gasseri JV-V03]
 gi|300354532|gb|EFJ70403.1| O-methyltransferase [Lactobacillus gasseri JV-V03]
          Length = 342

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+    D F    +T LL          +I+  D  +++DL +G  A  + +      
Sbjct: 17  DLRIIQEKDAFSFSLDTLLL------GYFAQIKIHDNYKVVDLCSGNAAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                V+I     + A+ +   N +  R +    +   + +      +D++V NPPY + 
Sbjct: 70  AHYDAVEIQADMADQARRSIELNKLENRIEVHCLNALEAPKKLGKDKYDMVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHVINPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|218195928|gb|EEC78355.1| hypothetical protein OsI_18110 [Oryza sativa Indica Group]
          Length = 1084

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 97/309 (31%), Gaps = 64/309 (20%)

Query: 1   MQALRDSHSFL--CRVTGLSSHQ-----VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR 53
           M A  +  SFL  C  +G  +       V+              L  A+ R         
Sbjct: 1   MAAAAEVESFLATCAASG-DAAYGAAKAVLERLQDPASRPDARRLLGAVRRRFAG-PAA- 57

Query: 54  ILGWRDFYNVRLTLSSDTFEPR---------------PETELLVDSALAFSLPRIEKRDV 98
             G   F      +     +P                P   +  D +  F        D 
Sbjct: 58  --GEECFRTFHFRIHDVVLDPHLRGFQQRKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDS 115

Query: 99  V----RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------- 147
           +     + +LG G G + +AL ++    K  G+DI+ +A++IA  N   N +        
Sbjct: 116 IFRDKTVAELGCGNGWISIALAEKWSPSKVYGLDINPRAVKIAWINLYLNALDDDGLPIY 175

Query: 148 --------ERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRI 194
                   +R +  +SD  S     +   D IV   P I +   + +   V +   +  +
Sbjct: 176 DGEGKTLLDRVEFYESDLLSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFL 235

Query: 195 -------SLDGGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESR 242
                  +L G ++   GL       +     +   G+    +G    Q V   R+F  R
Sbjct: 236 YSLSNYCALQGFVEDQFGLGLIARAVEEGISVIKPMGIMIFNMGGRPGQGV-CERLFRRR 294

Query: 243 KLFLVNAFK 251
              +   ++
Sbjct: 295 GFRITKLWQ 303


>gi|157162560|ref|YP_001459878.1| methyltransferase family protein [Escherichia coli HS]
 gi|229470494|sp|A8A4P1|RLMG_ECOHS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157068240|gb|ABV07495.1| methyltransferase family protein [Escherichia coli HS]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|301325561|ref|ZP_07219029.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
 gi|300847612|gb|EFK75372.1| methyltransferase small domain protein [Escherichia coli MS 78-1]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL+++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLEKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|170765846|ref|ZP_02900657.1| methyltransferase family protein [Escherichia albertii TW07627]
 gi|170124992|gb|EDS93923.1| methyltransferase family protein [Escherichia albertii TW07627]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|323979005|gb|EGB74084.1| methyltransferase small domain-containing protein [Escherichia coli
           TW10509]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     ++DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEVVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|320645454|gb|EFX14463.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H- str. 493-89]
 gi|320650765|gb|EFX19222.1| SAM-dependent 23S ribosomal RNA mG1835 methyltransferase
           [Escherichia coli O157:H- str. H 2687]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|281413892|ref|ZP_06245634.1| 16S RNA G1207 methylase RsmC [Micrococcus luteus NCTC 2665]
          Length = 401

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G + +   +  P    +  D S  A+    + A  N V++R   +
Sbjct: 254 DPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVASTLATARANRVADRVRAV 313

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + D  ++  +G  + ++ NPP+ +   VD          P ++             +   
Sbjct: 314 RDDALATWPDGTEECVLMNPPFHDGNAVD----------PSVA-----------HRLVAA 352

Query: 213 VSRHLNKDGLCSV 225
            +R L   G    
Sbjct: 353 AARVLEPGGRLWC 365


>gi|256019001|ref|ZP_05432866.1| putative methyltransferase small domain [Shigella sp. D9]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|240850880|ref|YP_002972280.1| ribosomal protein L11 methyltransferase [Bartonella grahamii
           as4aup]
 gi|240268003|gb|ACS51591.1| ribosomal protein L11 methyltransferase [Bartonella grahamii
           as4aup]
          Length = 289

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E  +    LDLGTG+G + + +    P    +  DI   A+++ + N   NG
Sbjct: 139 LEMIAKVMEHENPQNALDLGTGSGVLAIGIAMLKPIA-ILASDIDPIAIQVTQHNIQLNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V +    + +  F+  E      FD+IV+N                   +P I+L     
Sbjct: 198 VKKYITAVTATDFAHDEIASRAPFDLIVAN----------------ILANPLIAL----- 236

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                   A  + + L K G   +  I   Q  DV++ +  + L  +  +
Sbjct: 237 --------AQEMVKALQKGGSLILSGILEEQHADVLKAYVKQGLKHIETY 278


>gi|299536742|ref|ZP_07050052.1| hypothetical protein BFZC1_12007 [Lysinibacillus fusiformis ZC1]
 gi|298727856|gb|EFI68421.1| hypothetical protein BFZC1_12007 [Lysinibacillus fusiformis ZC1]
          Length = 249

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F    +  LL       S          +I+DL +G 
Sbjct: 9   ERLDYLLAE----NLRIIQSPSVFSFSLDAVLL-------SKFVSIPYHKGKIVDLCSGN 57

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L L   +   +  GV+I  +  E+A+ +   N + ++   +  D     +      
Sbjct: 58  GVIPLFLSARTKG-QITGVEIQPRLFEMAERSIRYNQLEQQIQMILGDVKEIPKQLGIEK 116

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY  +             +   +  ++L                 S+ L + 
Sbjct: 117 YDVVTCNPPYFLAHEASDKNLSEHHAIARHELYLTL----------EEAIQSASKLLKQG 166

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D+V    + +L
Sbjct: 167 GKAAFVHRPGRLLDIVTAMRANRL 190


>gi|258625579|ref|ZP_05720465.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM603]
 gi|258582132|gb|EEW06995.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM603]
          Length = 340

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPTLSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   + N +  R     SD FS  +  +D +V+NPP+   + 
Sbjct: 223 PNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMFSDTKHKYDYVVTNPPFHSGLD 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      + +    HL + G   V
Sbjct: 281 TSYSATE---------------------RLLEESVNHLTQTGSIWV 305


>gi|26249673|ref|NP_755713.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli CFT073]
 gi|91212513|ref|YP_542499.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli UTI89]
 gi|117625393|ref|YP_858716.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli APEC O1]
 gi|191172240|ref|ZP_03033783.1| methyltransferase family protein [Escherichia coli F11]
 gi|218560168|ref|YP_002393081.1| methyltransferase small domain [Escherichia coli S88]
 gi|227887809|ref|ZP_04005614.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           83972]
 gi|293412462|ref|ZP_06655185.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B354]
 gi|300973026|ref|ZP_07172050.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|300977562|ref|ZP_07173962.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|301048074|ref|ZP_07195114.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|331684737|ref|ZP_08385329.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H299]
 gi|81474337|sp|Q8FDE5|RLMG_ECOL6 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|122422364|sp|Q1R6P6|RLMG_ECOUT RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470495|sp|A1AG02|RLMG_ECOK1 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|26110101|gb|AAN82287.1|AE016767_47 Putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli CFT073]
 gi|91074087|gb|ABE08968.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli UTI89]
 gi|115514517|gb|ABJ02592.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli APEC O1]
 gi|190907550|gb|EDV67146.1| methyltransferase family protein [Escherichia coli F11]
 gi|218366937|emb|CAR04708.1| putative methyltransferase small domain [Escherichia coli S88]
 gi|227835205|gb|EEJ45671.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           83972]
 gi|284923112|emb|CBG36205.1| putative ribosomal RNA small subunit methyltransferase D
           [Escherichia coli 042]
 gi|291469233|gb|EFF11724.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B354]
 gi|294490632|gb|ADE89388.1| methyltransferase family protein [Escherichia coli IHE3034]
 gi|300300088|gb|EFJ56473.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300308252|gb|EFJ62772.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300410918|gb|EFJ94456.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|307555189|gb|ADN47964.1| methyltransferase family protein [Escherichia coli ABU 83972]
 gi|307625304|gb|ADN69608.1| putative methyltransferase small domain protein [Escherichia coli
           UM146]
 gi|315288871|gb|EFU48269.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|315294960|gb|EFU54297.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|323951385|gb|EGB47260.1| methyltransferase small domain-containing protein [Escherichia coli
           H252]
 gi|323957757|gb|EGB53471.1| methyltransferase small domain-containing protein [Escherichia coli
           H263]
 gi|324012058|gb|EGB81277.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
 gi|331078352|gb|EGI49558.1| ribosomal RNA large subunit methyltransferase G
           (rRNA(guanine-N(2)-)-methyltransferase) (23S rRNA
           m2G1835methyltransferase) [Escherichia coli H299]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|327438106|dbj|BAK14471.1| predicted O-methyltransferase [Solibacillus silvestris StLB046]
          Length = 249

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++R+  S   F    +  LL              ++   I+DL +G 
Sbjct: 9   ERLDYLLAE----DLRIIQSPSVFSFSLDAVLLARFV-------QVPKNKGHIIDLCSGN 57

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L L       K  GV++  +  ++A  +   N ++++ D    D   +        
Sbjct: 58  GVIPLFL-SARTNAKITGVELQPRLHDMATRSIEYNNLAQQIDMQLGDVKDAPGKLGIEK 116

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY  +  +          +   +  ++LD             +  SR L + 
Sbjct: 117 YDVVTCNPPYFLAHELSEKNTSEHYAIARHELYLTLD----------EAVEATSRLLKQG 166

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D+V    + +L
Sbjct: 167 GKAAFVHRPGRLLDIVSAMRANRL 190


>gi|293449421|ref|ZP_06663842.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B088]
 gi|291322511|gb|EFE61940.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           B088]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|299822882|ref|ZP_07054768.1| ribosomal protein L11 methyltransferase [Listeria grayi DSM 20601]
 gi|299816411|gb|EFI83649.1| ribosomal protein L11 methyltransferase [Listeria grayi DSM 20601]
          Length = 318

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 53/219 (24%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+       + +  S +++ P  E E++++              + L       
Sbjct: 117 TAWKKYYHPVQVTEQITIVPSWESYTP-SEHEIIIELDPGLAFGTGTHPTTQLCIRELAT 175

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + +    ILD+GTG+G + +   K       +  D+   A+  A  N   N         
Sbjct: 176 QLKGGETILDVGTGSGVLSIVSAKLGAE-TVLATDLDEVAVRAAAENIALNNTENVVTVK 234

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+D    +E   DVIV+N   I + ++     +VR                         
Sbjct: 235 QNDLLKGIEEEADVIVAN---ILAEVIVLFPEDVR------------------------- 266

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            R L  +GL     I  +++  V        L ++   +
Sbjct: 267 -RLLKPNGLFIASGIIKDKEEFVKEALVKAGLEIIATKQ 304


>gi|324008432|gb|EGB77651.1| methyltransferase small domain protein [Escherichia coli MS 57-2]
          Length = 219

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATSQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|327335209|gb|EGE76919.1| methyltransferase small domain protein [Propionibacterium acnes
           HL097PA1]
          Length = 362

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|115609582|ref|XP_788127.2| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
          putative [Strongylocentrotus purpuratus]
 gi|115931590|ref|XP_001190841.1| PREDICTED: similar to protein-(glutamine-N5) methyl transferase,
          putative [Strongylocentrotus purpuratus]
          Length = 95

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 7  SHSFLCRVTGLS--SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
          +   +  V G+   S    +D   +L   +R  +     + L    +  ILG  DF ++ 
Sbjct: 16 AEYIVAHVLGVRQLSEFARIDQSRILSTEERSRVMELASQKLARVPMQYILGEWDFRDLT 75

Query: 65 LTLSSDTFEPRPETELL 81
          L + +  F PRPETE++
Sbjct: 76 LKMKAPVFIPRPETEII 92


>gi|313763702|gb|EFS35066.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA1]
 gi|313816981|gb|EFS54695.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA1]
 gi|313829783|gb|EFS67497.1| methyltransferase small domain protein [Propionibacterium acnes
           HL063PA2]
 gi|314916544|gb|EFS80375.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA4]
 gi|314921003|gb|EFS84834.1| methyltransferase small domain protein [Propionibacterium acnes
           HL050PA3]
 gi|314932406|gb|EFS96237.1| methyltransferase small domain protein [Propionibacterium acnes
           HL067PA1]
 gi|314956715|gb|EFT00967.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA1]
 gi|315100177|gb|EFT72153.1| methyltransferase small domain protein [Propionibacterium acnes
           HL059PA2]
 gi|315102499|gb|EFT74475.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA1]
 gi|315109582|gb|EFT81558.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA2]
 gi|327455823|gb|EGF02478.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA3]
 gi|327457971|gb|EGF04626.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA2]
 gi|328757138|gb|EGF70754.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA1]
 gi|328757517|gb|EGF71133.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA2]
          Length = 362

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|325911809|ref|ZP_08174213.1| GIY-YIG catalytic domain protein [Lactobacillus iners UPII 143-D]
 gi|325476315|gb|EGC79477.1| GIY-YIG catalytic domain protein [Lactobacillus iners UPII 143-D]
          Length = 342

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    A+ +   N +  R +    +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAERSVSLNKLENRIEVHCMNALDTPNVLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PDGHRINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKFFIVH 173


>gi|295099358|emb|CBK88447.1| 16S RNA G1207 methylase RsmC [Eubacterium cylindroides T2-87]
          Length = 196

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 54/212 (25%)

Query: 55  LGWRDFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           +  + F       +   F   +    T++L+++ L        + +   +LDLG G G +
Sbjct: 22  IKEKKF---EFESNQGVFSKDKLDEGTKILLNTVLEH------ESNPETVLDLGCGIGVI 72

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            + L           +DI+ +A E+AK N   + +               EG F+ I+ N
Sbjct: 73  GIVL-SSFWKTNMTMIDINARACELAKKNLERHSIQATLKNDDGI----KEGNFECILLN 127

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EI 227
           PP                            G     ++ D    HLN+DG   +    + 
Sbjct: 128 PPI-------------------------RTGKKVIYSLFDQCLEHLNEDGRLWIVMRKQH 162

Query: 228 GYNQK--------VDVVRIFESRKLFLVNAFK 251
           G             +V R+   +  +++   K
Sbjct: 163 GAQSAVNYFEEKQANVERVARDKGYWIMKITK 194


>gi|240102667|ref|YP_002958976.1| SAM-dependent methyltransferase, putative [Thermococcus
           gammatolerans EJ3]
 gi|239910221|gb|ACS33112.1| SAM-dependent methyltransferase, putative [Thermococcus
           gammatolerans EJ3]
          Length = 247

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 26/217 (11%)

Query: 15  TGLS-SHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDT 71
            GL     V + P+    LD+R R   +N   R L + +I      +  + + +      
Sbjct: 9   LGLPIKEAVTLFPELKDYLDERGRLDFSNREARILYNRAIA-----KALFGLEIEYHPRG 63

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
               P +  L          +   +   ++L++GTG  A+   + ++    +    ++  
Sbjct: 64  LVTPPISRYL--------FLKTFLKGGEKVLEIGTGHTAMMALIAEKLFDCEVAATELDE 115

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +  E A+ N   N    R           V      FDVI S PPY E      L     
Sbjct: 116 EFFEYARRNIERNLARIRLIKSDGGIIRGVIPEGERFDVIFSAPPYYERPTKGVLTE--- 172

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               R  + GG  G +    + +    +L   G  ++
Sbjct: 173 ----REGVGGGKYGEAFSVGLIEEARYYLRPGGKVAL 205


>gi|325496345|gb|EGC94204.1| S-adenosyl-L-methionine-dependent methyltransferase [Escherichia
           fergusonii ECD227]
          Length = 239

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 33  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAATQAQENINQSPWAERI 92

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 93  NIYPADIQQWITQQTARFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 142

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
           +++    +  + ++G   V +          +       L     D   N+     RVLL
Sbjct: 143 QSLLTCAAECITEEGFFCVVLPEQIGNGFTELALRMGWHL-RLRTDVAENEARLPHRVLL 201

Query: 262 F 262
            
Sbjct: 202 A 202


>gi|300817648|ref|ZP_07097863.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300927048|ref|ZP_07142800.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1]
 gi|301330323|ref|ZP_07222970.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|309794371|ref|ZP_07688794.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|300416932|gb|EFK00243.1| hypothetical protein HMPREF9548_05033 [Escherichia coli MS 182-1]
 gi|300529636|gb|EFK50698.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300843657|gb|EFK71417.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|308121827|gb|EFO59089.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 219

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +     +  V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVIIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSD---WFSSVEGLFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D   W +     FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADIQQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|209964877|ref|YP_002297792.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           centenum SW]
 gi|209958343|gb|ACI98979.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           centenum SW]
          Length = 427

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+G G G + L L + +   +  GV +S + L IA+  A   G+S+R     +
Sbjct: 189 RPGQRVLDIGCGWGGLALHLARAA-DVEVTGVTLSQEQLAIARRRAEEAGLSDRVRFELA 247

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D +  ++G FD IVS                V  F+          GL HY T       
Sbjct: 248 D-YRRLKGRFDRIVS----------------VGMFE--------HVGLPHYDTFFATARD 282

Query: 216 HLNKDGLCSV 225
            L++DG+  +
Sbjct: 283 LLSEDGVMLL 292


>gi|300922296|ref|ZP_07138421.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
 gi|300421358|gb|EFK04669.1| methyltransferase small domain protein [Escherichia coli MS 182-1]
          Length = 378

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN      R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALNRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|123441354|ref|YP_001005341.1| hypothetical protein YE1008 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|262828849|sp|A1JKJ4|TRMN6_YERE8 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|122088315|emb|CAL11106.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 251

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + + S P     GV++  +A + A SNA  +  +ER 
Sbjct: 45  WVPVEKARKVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERV 104

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 105 HIYQQDVHQFAENHLHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 155

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + ++   ++ R+   +  F +      +D  G    R+LL
Sbjct: 156 ALLNCAEKLITEDGIFCVVLPHDLGEELSRLAVQQNWF-IRCQVDIRDRPGKPLHRILL 213


>gi|300974120|ref|ZP_07172470.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300982279|ref|ZP_07175990.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|301047214|ref|ZP_07194306.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300300891|gb|EFJ57276.1| methyltransferase small domain protein [Escherichia coli MS 185-1]
 gi|300308943|gb|EFJ63463.1| methyltransferase small domain protein [Escherichia coli MS 200-1]
 gi|300408833|gb|EFJ92371.1| methyltransferase small domain protein [Escherichia coli MS 45-1]
 gi|315287991|gb|EFU47393.1| methyltransferase small domain protein [Escherichia coli MS 110-3]
 gi|315294532|gb|EFU53880.1| methyltransferase small domain protein [Escherichia coli MS 153-1]
 gi|315300544|gb|EFU59773.1| methyltransferase small domain protein [Escherichia coli MS 16-3]
 gi|324014380|gb|EGB83599.1| methyltransferase small domain protein [Escherichia coli MS 60-1]
          Length = 219

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V R LD+G G+G + L L + +        V++  +A   A+ N   +  +ER 
Sbjct: 13  WAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERI 72

Query: 151 DTLQSDWFSSVEG---LFDVIVSNPPYIESV-IVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +   +D    +      FD+I+SNPPY +          E   +    +LD        +
Sbjct: 73  NVHTADILQWITQQTVRFDLIISNPPYYQQGVECATPQREQARY--TTTLD--------H 122

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLL 261
            ++    +  + ++G   V +          +  S    L     D   N+     RVLL
Sbjct: 123 PSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHL-RLRTDVAENEARLPHRVLL 181

Query: 262 F 262
            
Sbjct: 182 A 182


>gi|229530429|ref|ZP_04419817.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
 gi|229332202|gb|EEN97690.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
 gi|327483426|gb|AEA77833.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           LMA3894-4]
          Length = 340

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSG----KVIDIGCGAGVLGGVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 PHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|110003918|emb|CAK98258.1| putative methyltransferase protein [Spiroplasma citri]
          Length = 240

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 71/194 (36%), Gaps = 26/194 (13%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+  +++   +D F    +T LL   A   +        +  ILD+GT    + L +L  
Sbjct: 9   DYEGIKINQRTDMFNFSLDTVLLARFATLNTR-------IKNILDIGTNNATIPL-ILST 60

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
                  G+++  +A+++A+ N + N  +E+   +  D    V+      +D+I+ NPP+
Sbjct: 61  LTSAIITGIELQKEAVQLAEENILLNHKTEQIKIIHDDINEYVKTNANFKYDLIICNPPF 120

Query: 175 IESVIVDCLGLEVR----DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +                  +  ++L            I     + +   G  ++     
Sbjct: 121 FKVDGAKLNEKNKLLIPARHETNVTL----------EEIIFAAKKLVANRGYFAIIHRTT 170

Query: 231 QKVDVVRIFESRKL 244
           + +++  +      
Sbjct: 171 RLLEITSLLIKYGF 184


>gi|115456297|ref|NP_001051749.1| Os03g0824200 [Oryza sativa Japonica Group]
 gi|27545037|gb|AAO18443.1| unknown protein [Oryza sativa Japonica Group]
 gi|108711830|gb|ABF99625.1| methylase family protein, expressed [Oryza sativa Japonica Group]
 gi|113550220|dbj|BAF13663.1| Os03g0824200 [Oryza sativa Japonica Group]
 gi|125546257|gb|EAY92396.1| hypothetical protein OsI_14129 [Oryza sativa Indica Group]
 gi|215765384|dbj|BAG87081.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222626075|gb|EEE60207.1| hypothetical protein OsJ_13176 [Oryza sativa Japonica Group]
          Length = 285

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 24/205 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ L+     +  +  +  +++G G+G    ++ + L +     +
Sbjct: 51  HPEVYEPCDDSFALVDALLSDKAQLLTLKPRL-CMEIGCGSGYVITSLAIMLRQLGSGTQ 109

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DI+  A+E  ++    +GV    D + +D  S +E     +V     +    V   
Sbjct: 110 YLATDINQHAVETTQATLEAHGV--HADVIATDIVSGLEKRLHGLVDVV-VVNPPYVPTP 166

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----------------EI 227
             E+       S  GGI+G      I   V   L++ G   +                E 
Sbjct: 167 EEEIESNGIASSWAGGINGRQVIDRILPAVRELLSERGWLYMIALEDNDPLDICHLMNEK 226

Query: 228 GYNQKVDVVRIFESRKLFLVNAFKD 252
           GY  +V + R  E   L+++  ++D
Sbjct: 227 GYASRVLLKRCTEEESLYVLKFWQD 251


>gi|302873026|ref|YP_003841659.1| methyltransferase small [Clostridium cellulovorans 743B]
 gi|307688819|ref|ZP_07631265.1| methyltransferase small [Clostridium cellulovorans 743B]
 gi|302575883|gb|ADL49895.1| methyltransferase small [Clostridium cellulovorans 743B]
          Length = 244

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 19/176 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +++    R++DL TGTG +   L  ++     VG++I  + +E+A    
Sbjct: 31  VDAVLLANFANVKRSH--RVIDLCTGTGIIPFILAGKTESNSIVGIEIQDEFVEMADRTV 88

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRI 194
             N + ER      D     F    GL DV+  NPPY           +   +   +   
Sbjct: 89  EYNKLQERVSFHCRDLKDLAFLKTLGLVDVVTVNPPYKLQNSGLINPNDKNAIARHEILC 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +L            +       L  +G   +    ++  D+  +     +      
Sbjct: 149 TL----------EDVIIASKAVLKDNGRLYMVHRPDRLADIFCLMRKHNIEPKRVR 194


>gi|257069720|ref|YP_003155975.1| methyltransferase family protein [Brachybacterium faecium DSM 4810]
 gi|256560538|gb|ACU86385.1| methyltransferase family protein [Brachybacterium faecium DSM 4810]
          Length = 525

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 14/160 (8%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           PE  L V  A         +R V R+LDLG G G   L   + +     V  D+S +AL 
Sbjct: 155 PEHVLGVGGASLTLAKLTPRRSVGRVLDLGCGGGIQALHAARHAE--HVVATDLSARALA 212

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A         S   +  Q      V G  FD+IVSNPP++ +            +    
Sbjct: 213 FAAF--NAALNSIEIELRQGSLLEPVAGESFDLIVSNPPFVITPRDAADEATTWTY---- 266

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYN 230
             DGG  G +    +   +  HL+  G   +    EIG +
Sbjct: 267 -RDGGRAGDALLGELLRALPAHLSPGGSAVMLGNWEIGAD 305


>gi|254462690|ref|ZP_05076106.1| methyltransferase small [Rhodobacterales bacterium HTCC2083]
 gi|206679279|gb|EDZ43766.1| methyltransferase small [Rhodobacteraceae bacterium HTCC2083]
          Length = 264

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 12/142 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD  L      I  +    +L+LG G G   L L +        GV++     ++A+ NA
Sbjct: 39  VDPVL--LAASIPAKAGETVLELGCGGGVASLCLARRLVGLTLTGVELQENYADLARRNA 96

Query: 142 VTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N +        + +  F  ++  FD + +NPPY +      +    +  +  +   GG
Sbjct: 97  ERNALDLNVVHADINALPFEVLDQRFDHVFANPPYYDRA--HSVPARDKGRETGL---GG 151

Query: 200 IDGLSHYRTIADGVSRHLNKDG 221
              L   R      S+ L   G
Sbjct: 152 NTPL---RKWVAVASKRLAPKG 170


>gi|16799285|ref|NP_469553.1| hypothetical protein lin0208 [Listeria innocua Clip11262]
 gi|16412627|emb|CAC95441.1| lin0208 [Listeria innocua Clip11262]
          Length = 250

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + ++ + ++ D     +      
Sbjct: 59  GIIPL-LLSTRTKAQIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLNHITDLIPKER 117

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY    S  +       R    +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPSTSLKNENEHYRIARHEIMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 168 GKANFVHRPERLLDIIDLMRKYRL 191


>gi|313677810|ref|YP_004055806.1| methyltransferase small [Marivirga tractuosa DSM 4126]
 gi|312944508|gb|ADR23698.1| methyltransferase small [Marivirga tractuosa DSM 4126]
          Length = 237

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +V  +L++GTGTG + L L +     K   V+I+  A E A++N   +  + R   +  D
Sbjct: 36  NVRAVLEVGTGTGVLSLMLAQRFSDIKIDAVEINPIAYEEAQNNFKNSKWNARLKVVLED 95

Query: 157 WFS-SVEGLFDVIVSNPPYIESV 178
           +     +  +D+I SNPP+ +  
Sbjct: 96  FIEFETDHKYDLIFSNPPFFKDN 118


>gi|171920991|ref|ZP_02932113.1| DNA methylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
 gi|185179168|ref|ZP_02964875.1| DNA methylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188024280|ref|ZP_02996973.1| DNA methylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188518633|ref|ZP_03004075.1| dna methylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
 gi|188524483|ref|ZP_03004489.1| DNA methylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
 gi|195867632|ref|ZP_03079634.1| DNA methylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
 gi|198273616|ref|ZP_03206151.1| DNA methylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209554372|ref|YP_002284703.1| DNA methylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
 gi|225551340|ref|ZP_03772286.1| methyltransferase family protein [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
 gi|171903022|gb|EDT49311.1| DNA methylase [Ureaplasma urealyticum serovar 13 str. ATCC 33698]
 gi|184208902|gb|EDU05945.1| DNA methylase [Ureaplasma urealyticum serovar 5 str. ATCC 27817]
 gi|188018950|gb|EDU56990.1| DNA methylase [Ureaplasma urealyticum serovar 7 str. ATCC 27819]
 gi|188997793|gb|EDU66890.1| dna methylase [Ureaplasma urealyticum serovar 11 str. ATCC 33695]
 gi|195659566|gb|EDX52946.1| DNA methylase [Ureaplasma urealyticum serovar 12 str. ATCC 33696]
 gi|195660689|gb|EDX53944.1| DNA methylase [Ureaplasma urealyticum serovar 9 str. ATCC 33175]
 gi|198249644|gb|EDY74425.1| DNA methylase [Ureaplasma urealyticum serovar 4 str. ATCC 27816]
 gi|209541873|gb|ACI60102.1| DNA methylase [Ureaplasma urealyticum serovar 10 str. ATCC 33699]
 gi|225379155|gb|EEH01520.1| methyltransferase family protein [Ureaplasma urealyticum serovar 8
           str. ATCC 27618]
          Length = 262

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 73/170 (42%), Gaps = 14/170 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +  +   ++L++GT   A+ + L           ++I  +A+++A  N 
Sbjct: 29  VDTVLLANFISLSSK-TKKVLEIGTNNAALSIFLASRKEDMNIDAIEIQSEAIDLALLNV 87

Query: 142 VTNGVSERFDTLQSDW------FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             N + ++ + + +D+      F  +E   +D I+ NPP+ +    D +    +   P  
Sbjct: 88  KENHLEKQINIIHADFNEYWKTFDKIENNKYDAIICNPPFYKQ---DKIIPSTKK--PLK 142

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L      L+    I  G ++ + +    ++ I   + VD++ +    + 
Sbjct: 143 TLALYEIALNF-EQIMQGCAKIIKQKANLAMVIPTTRLVDLLEMMRKYQF 191


>gi|50083924|ref|YP_045434.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter sp. ADP1]
 gi|81393695|sp|Q6FE96|RSMC_ACIAD RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|49529900|emb|CAG67612.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter sp. ADP1]
          Length = 338

 Score = 71.3 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 71/204 (34%), Gaps = 38/204 (18%)

Query: 24  VDPDSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLV 82
           +   ++    Q   L   +   S+K+E+I           + +      F     ++  +
Sbjct: 135 LWQTTIETTEQLKPLEQWLKHYSVKNENIQ----------LEIYALPGVF-----SQNHL 179

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +  + +I D G G G +   L + SP  +   +DI   AL   +    
Sbjct: 180 DIGTAVLLPYLNQIKLGKIADFGCGAGVISAYLAQLSPHNEIHALDIDAFALRSTEFTFQ 239

Query: 143 TNGVS-ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG++ ER                DVIVSNPP+ + +  D    E               
Sbjct: 240 RNGLASERLHLHAVTGIQDAPKALDVIVSNPPFHQGIHTDYSASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
           GL           +HLN  G   +
Sbjct: 285 GL------CKTAKQHLNTSGELWI 302


>gi|313771720|gb|EFS37686.1| methyltransferase small domain protein [Propionibacterium acnes
           HL074PA1]
 gi|313793751|gb|EFS41782.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA1]
 gi|313803063|gb|EFS44271.1| methyltransferase small domain protein [Propionibacterium acnes
           HL110PA2]
 gi|313808468|gb|EFS46935.1| methyltransferase small domain protein [Propionibacterium acnes
           HL087PA2]
 gi|313810542|gb|EFS48256.1| methyltransferase small domain protein [Propionibacterium acnes
           HL083PA1]
 gi|313818106|gb|EFS55820.1| methyltransferase small domain protein [Propionibacterium acnes
           HL046PA2]
 gi|313820965|gb|EFS58679.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA1]
 gi|313823963|gb|EFS61677.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA2]
 gi|313827100|gb|EFS64814.1| methyltransferase small domain protein [Propionibacterium acnes
           HL063PA1]
 gi|313831585|gb|EFS69299.1| methyltransferase small domain protein [Propionibacterium acnes
           HL007PA1]
 gi|313832572|gb|EFS70286.1| methyltransferase small domain protein [Propionibacterium acnes
           HL056PA1]
 gi|314926991|gb|EFS90822.1| methyltransferase small domain protein [Propionibacterium acnes
           HL036PA3]
 gi|314961811|gb|EFT05912.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA2]
 gi|314964796|gb|EFT08896.1| methyltransferase small domain protein [Propionibacterium acnes
           HL082PA1]
 gi|314974935|gb|EFT19030.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA1]
 gi|314977971|gb|EFT22065.1| methyltransferase small domain protein [Propionibacterium acnes
           HL045PA1]
 gi|314979639|gb|EFT23733.1| methyltransferase small domain protein [Propionibacterium acnes
           HL072PA2]
 gi|314984619|gb|EFT28711.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA1]
 gi|314988276|gb|EFT32367.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA2]
 gi|314990365|gb|EFT34456.1| methyltransferase small domain protein [Propionibacterium acnes
           HL005PA3]
 gi|315079238|gb|EFT51241.1| methyltransferase small domain protein [Propionibacterium acnes
           HL053PA2]
 gi|315082300|gb|EFT54276.1| methyltransferase small domain protein [Propionibacterium acnes
           HL078PA1]
 gi|315083731|gb|EFT55707.1| methyltransferase small domain protein [Propionibacterium acnes
           HL027PA2]
 gi|315087370|gb|EFT59346.1| methyltransferase small domain protein [Propionibacterium acnes
           HL002PA3]
 gi|315089787|gb|EFT61763.1| methyltransferase small domain protein [Propionibacterium acnes
           HL072PA1]
 gi|315095561|gb|EFT67537.1| methyltransferase small domain protein [Propionibacterium acnes
           HL038PA1]
 gi|327326550|gb|EGE68338.1| methyltransferase small domain protein [Propionibacterium acnes
           HL096PA3]
 gi|327332816|gb|EGE74548.1| methyltransferase small domain protein [Propionibacterium acnes
           HL096PA2]
 gi|327447639|gb|EGE94293.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA2]
 gi|327448512|gb|EGE95166.1| methyltransferase small domain protein [Propionibacterium acnes
           HL043PA1]
 gi|327449631|gb|EGE96285.1| methyltransferase small domain protein [Propionibacterium acnes
           HL013PA2]
 gi|327456083|gb|EGF02738.1| methyltransferase small domain protein [Propionibacterium acnes
           HL092PA1]
 gi|328757333|gb|EGF70949.1| methyltransferase small domain protein [Propionibacterium acnes
           HL020PA1]
 gi|328762093|gb|EGF75598.1| methyltransferase small domain protein [Propionibacterium acnes
           HL099PA1]
          Length = 362

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|119719784|ref|YP_920279.1| putative methylase [Thermofilum pendens Hrk 5]
 gi|119524904|gb|ABL78276.1| putative methylase [Thermofilum pendens Hrk 5]
          Length = 179

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 22/156 (14%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            +EPR +T LL+D                 ++++G G G V +        +  VGVDI+
Sbjct: 2   VYEPREDTFLLLDCL-------KRGFRGGVLVEVGCGKGVVSVY-ASNRADY-VVGVDIA 52

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +A+ +++            D +Q+D  +   +   DV+ SNPPY+     +        
Sbjct: 53  WEAVRLSRE-LARASKECLVDFVQADMLNPFRDSSADVVASNPPYLPCDYRE-------- 103

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            DP +   GG DG+     +A    R L + G   +
Sbjct: 104 -DPLV--CGGEDGVEFSARLAREAFRVLRRSGELFL 136


>gi|313813824|gb|EFS51538.1| methyltransferase small domain protein [Propionibacterium acnes
           HL025PA1]
          Length = 362

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               D +V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDAVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|313625539|gb|EFR95250.1| methyltransferase small domain-containing protein [Listeria innocua
           FSL J1-023]
          Length = 257

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 22/200 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N ++++ + ++ D     +      
Sbjct: 66  GIIPL-LLSTRTKAQIVGVEIQERLADMAKRSVAYNQLADQIEIIEYDLNHITDLIPKER 124

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++  NPPY  +             +         + +          +  L + G  +
Sbjct: 125 ADIVTCNPPYFATPSTS------LKNENEHYRIARHEIMCTLEDTIRVAASLLKQGGKAN 178

Query: 225 VEIGYNQKVDVVRIFESRKL 244
                 + +D++ +    +L
Sbjct: 179 FVHRPERLLDIIDLMRKYRL 198


>gi|291320135|ref|YP_003515393.1| DNA methylase [Mycoplasma agalactiae]
 gi|290752464|emb|CBH40436.1| DNA methylase [Mycoplasma agalactiae]
          Length = 261

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 22/167 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              + R+L++GT  GA+ + + + S   K   ++I  KA ++A  N + N   E+ + +Q
Sbjct: 44  NHKIKRMLEIGTNNGALSIFISERSKNLKIDAIEIQEKAAKLATDNVIINNKQEQINVIQ 103

Query: 155 SDWFSS-------VEGLFDVIVSNPP---YIESVIVDCLGLEVR--DFDPRISLDGGIDG 202
           +D+          V+  ++ IV NPP   Y +S I   +  EV     + +++L      
Sbjct: 104 ADFNDFYKEHTKLVKPKYEAIVCNPPFYVYDKSKISKKISEEVLIATHEVKLNL------ 157

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                 I  G ++ + + G  ++ I   + VD   +    K      
Sbjct: 158 ----EQIISGSAKIIEQKGYLTLVIPAERLVDCFCLMRQYKFEPKRV 200


>gi|262274755|ref|ZP_06052566.1| ribosomal RNA small subunit methyltransferase C [Grimontia hollisae
           CIP 101886]
 gi|262221318|gb|EEY72632.1| ribosomal RNA small subunit methyltransferase C [Grimontia hollisae
           CIP 101886]
          Length = 378

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 40/204 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKES 119
           + + L   ++ F     +   +D A    L  I     +  I+DLG G G + +   + +
Sbjct: 199 FGMTLHNHANVF-----SSESLDIAAYLMLKHIPVSTKIKHIIDLGCGNGVLSVEAARRN 253

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           P      VD S  A+    +N +++G+   R     ++     E    D+++ NPP+ + 
Sbjct: 254 PQATITAVDESHMAVASTTTNLLSHGIEPARIHCKVNNCLDGFEKNSADLVLCNPPFHQM 313

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVD 234
                    V D                   +     R L   G   V IG         
Sbjct: 314 NT-------VTDH--------------IAWQMFCDARRVLEPKGRIVV-IGNRHLGYHAK 351

Query: 235 VVRIF-------ESRKLFLVNAFK 251
           + R+F        +RK  +V A+K
Sbjct: 352 LKRLFGNAQVIASNRKFVIVEAYK 375


>gi|197120676|ref|YP_002132627.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
 gi|220915388|ref|YP_002490692.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196170525|gb|ACG71498.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp. K]
 gi|219953242|gb|ACL63626.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 287

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 41/175 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     +  R    +LD+GTG+G + +A  ++    +  G D    A+ +A+ NA  NG
Sbjct: 137 LAGLSELLAARPGASVLDVGTGSGLLAIA-ARKLGAGRVTGNDNDPVAVAVARENAARNG 195

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V E    L  D   ++ G FDV+V+N   I +  +  L  E                   
Sbjct: 196 VPE--VALTEDALPAIGGAFDVVVAN---ILANTLVELAPE------------------- 231

Query: 206 YRTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                  ++  L   G   +   +G  Q+ +V   + +  L          G DR
Sbjct: 232 -------IAARLAPGGAVLLSGILGP-QEDEVRAAYLALGLRP------LAGGDR 272


>gi|218551605|ref|YP_002385397.1| methyltransferase small domain [Escherichia fergusonii ATCC 35469]
 gi|218359147|emb|CAQ91810.1| putative methyltransferase small domain [Escherichia fergusonii
           ATCC 35469]
          Length = 378

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|54308014|ref|YP_129034.1| methyltransferase [Photobacterium profundum SS9]
 gi|81615447|sp|Q6LTZ3|RLMG_PHOPR RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|46912440|emb|CAG19232.1| Hypothetical methyltransferase [Photobacterium profundum SS9]
          Length = 374

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 41/207 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKES 119
           + +RL+  ++ F     +   +D      L  I +      I+DLG G G + +   + +
Sbjct: 198 HGIRLSNHANVF-----SGESLDIGARLLLNHIPQDFKYKDIIDLGCGNGVIGIKAARRN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           P  K   VD S  A      NA  N    E+   + +D  + +E    D+++ NPP+ + 
Sbjct: 253 PQAKITCVDESFMAAASCTENAKQNLEAPEQLTAIVTDCLADIEHSSADLVLCNPPFHQQ 312

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVD 234
             +             I+             +     + L   G   V IG  Q      
Sbjct: 313 TTITD----------HIAW-----------QMFCDAKQVLRPKGELIV-IGNRQLGYDDK 350

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + R+F       V        ND+ ++
Sbjct: 351 LKRLFG-----NVEII---AQNDKFIV 369


>gi|119468454|ref|ZP_01611545.1| Putative ribosomal RNA small subunit methyltransferase D
           [Alteromonadales bacterium TW-7]
 gi|119447962|gb|EAW29227.1| Putative ribosomal RNA small subunit methyltransferase D
           [Alteromonadales bacterium TW-7]
          Length = 380

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 27/142 (19%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-- 151
           +     +I+DLG G G V +  L   P      VD S  A+E A+ N   N ++ERFD  
Sbjct: 227 QTPKAKKIIDLGCGNGVVGVMTLARCPKASVTFVDESYMAVESARLNVEQN-MAERFDDC 285

Query: 152 -TLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             +++D  +  E    D+++ NPP+ ++         V D                   +
Sbjct: 286 EFIENDCLTGFEKNSVDMVLCNPPFHQA-------QAVTDH--------------IAWQM 324

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ 231
                  L + G   + IG   
Sbjct: 325 FKQAKDTLKEGGELRI-IGNRH 345


>gi|223044401|ref|ZP_03614434.1| methyltransferase [Staphylococcus capitis SK14]
 gi|222442190|gb|EEE48302.1| methyltransferase [Staphylococcus capitis SK14]
          Length = 241

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + D F    +  LL            E R   RI+DL +G G + L L  +   
Sbjct: 15  GYEIIQNDDVFSFSTDALLL--------GHLTEVRKNDRIMDLCSGNGVIPLLLAAKC-N 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K   ++I  + +E+A+ + V N + ER      D  +  +      + ++  NPPY + 
Sbjct: 66  QKIEAIEIQDQLVEMARRSFVHNSLDERLTMYLMDLNNVYDTFKPSQYTLVTCNPPYFKV 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             ++    E         +    D               L + G   V    ++ +DV+ 
Sbjct: 126 NQLNQHQKEAHKIARHEVMCDFTD-------CVKAARHLLREGGRFIVVHRADRLMDVLT 178

Query: 238 IFES 241
              +
Sbjct: 179 EMRN 182


>gi|209964970|ref|YP_002297885.1| methyltransferase small domain protein [Rhodospirillum centenum SW]
 gi|209958436|gb|ACI99072.1| methyltransferase small domain protein [Rhodospirillum centenum SW]
          Length = 254

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +P+      +D  L      +  R    +L+LG G GA  L L   +P  +   ++   
Sbjct: 26  LQPQRGYRAAIDPVL--LAAAVPARAGEAVLELGAGAGAATLCLAARAPGCRLTALERQP 83

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEV 187
            A    +     NG  +R   L+ D  +   GL    FD ++ NPP+ E           
Sbjct: 84  AAAAALRQGVALNGWQDRISVLEGDLRAPPPGLPLNGFDRVLMNPPFYEEGRHTPSPA-- 141

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
               P  +     +G +          RHL   G+ ++    ++   ++     R
Sbjct: 142 ----PGKA-ASHGEGEATLADWVRAALRHLKGRGILTLVHRADRLDAILAALHGR 191


>gi|258611913|ref|ZP_05243061.2| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293596357|ref|ZP_05230919.2| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|293596997|ref|ZP_05266367.2| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|300764912|ref|ZP_07074901.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
 gi|258607093|gb|EEW19701.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|293584566|gb|EFF96598.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293595157|gb|EFG02918.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|300514399|gb|EFK41457.1| conserved hypothetical protein [Listeria monocytogenes FSL N1-017]
          Length = 250

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK +   N + ++ + ++ D     +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|332162700|ref|YP_004299277.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606805|emb|CBY28303.1| putative O-methyltransferase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666930|gb|ADZ43574.1| hypothetical protein YE105_C3080 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860493|emb|CBX70797.1| uncharacterized protein yfiC [Yersinia enterocolitica W22703]
          Length = 248

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + + S P     GV++  +A + A SNA  +  +ER 
Sbjct: 42  WVPVEKARKVLDIGCGSGLIALMIAQRSTPEVMIDGVELEPEAAQQASSNAAQSPWAERV 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              Q D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 102 HIYQQDVHQFAENHLHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + +DG+  V + ++   ++ R+   +  F +      +D  G    R+LL
Sbjct: 153 ALLNCAEKLITEDGVFCVVLPHDLGKELSRLAVQQNWF-IRCQVDIRDRPGKPLHRMLL 210


>gi|158300145|ref|XP_320147.4| AGAP012408-PA [Anopheles gambiae str. PEST]
 gi|157013016|gb|EAA00138.4| AGAP012408-PA [Anopheles gambiae str. PEST]
          Length = 577

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 15/118 (12%)

Query: 40  NAIVRSLKHE---SIHRILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSL 90
             I +  + +    I  + G          +   +S   F     P  E+L   A+  + 
Sbjct: 327 EVIQKRQQGQYTNPIEHLYGETHIEDTILGLTFRISPAAFFQINTPAAEVLYQCAIDVAA 386

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           P         ILD+  GTG + L   +     + +GVDI  +A+E AK NA  NG+  
Sbjct: 387 P----SKSTSILDICCGTGTIGLCFARHCK--QVLGVDIVEQAIEDAKHNAQKNGIEN 438


>gi|162149100|ref|YP_001603561.1| cyclopropane-fatty-acyl-phospholipid synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209545157|ref|YP_002277386.1| Cyclopropane-fatty-acyl-phospholipid synthase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787677|emb|CAP57273.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532834|gb|ACI52771.1| Cyclopropane-fatty-acyl-phospholipid synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 417

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 33/160 (20%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEK-----RDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            + PR +  L  + A       I       R  + +LD+G G G + L L +E    +  
Sbjct: 144 AYFPRGDETL--EEAQVAKKRHIAAKLRLDRPGLEVLDIGCGWGGMALTLAREY-GARVT 200

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+ +S + L +A+  A   G+++R      D + +V   FD IVS               
Sbjct: 201 GITLSEEQLGVARQRARDEGLADRVRFELVD-YRAVTRRFDRIVS--------------- 244

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            V  F+          G+ HYR   D V+  L  DG+  +
Sbjct: 245 -VGMFE--------HVGIGHYRQFFDLVANILAPDGVMLL 275


>gi|297617814|ref|YP_003702973.1| ribosomal protein L11 methyltransferase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145651|gb|ADI02408.1| ribosomal protein L11 methyltransferase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 308

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 24/152 (15%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL--------- 102
           W+ +Y       RL +     + R E   +V                 R           
Sbjct: 109 WKSYYHSLKIGKRLVIKPSWEDYRAEPGEVVIEIDPGMAFGTGTHATTRFCLELIEKYVS 168

Query: 103 ------DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
                 D+GTG+G + +A  K     + + +D+   A+++AK N   NGV E+ +    D
Sbjct: 169 KDMTLIDIGTGSGILAIAAAKLGAR-RIIALDLDPVAVQVAKENVARNGVEEQVEVWNLD 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +    E   D+IV N   + + +V  L  ++R
Sbjct: 228 FREMPETRADLIVGN---LTAELVKELAPKIR 256


>gi|312968571|ref|ZP_07782780.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           2362-75]
 gi|312286789|gb|EFR14700.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           2362-75]
          Length = 378

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
           TN     +R + + ++  S VE   F+ ++ NPP+
Sbjct: 274 TNMPESLDRCEFMINNALSGVEPFRFNAVLCNPPF 308


>gi|300812574|ref|ZP_07092991.1| GIY-YIG catalytic domain protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300496447|gb|EFK31552.1| GIY-YIG catalytic domain protein [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 336

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E I  +LG +    +++     +F    +T LL   A          ++  ++++L +
Sbjct: 6   ENERIDYMLGEQ----LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSKVVELCS 55

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G  A  L +           V++    +  A+ +   N + +R    Q +   +     +
Sbjct: 56  GNAAASLYMA-AFNKAHYDDVELQEDIVSKARRSVELNDMQDRITVHQGNVKDAGSFLRK 114

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +DV+V NPPY ++     L  +    +   +  I+L            I    +  L 
Sbjct: 115 DSYDVVVVNPPYFKAPAGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLK 164

Query: 219 KDGLCSVEI 227
             G   +  
Sbjct: 165 MKGKMFMVH 173


>gi|255525325|ref|ZP_05392265.1| ribosomal protein L11 methyltransferase [Clostridium
           carboxidivorans P7]
 gi|296188193|ref|ZP_06856585.1| ribosomal protein L11 methyltransferase [Clostridium
           carboxidivorans P7]
 gi|255510997|gb|EET87297.1| ribosomal protein L11 methyltransferase [Clostridium
           carboxidivorans P7]
 gi|296047319|gb|EFG86761.1| ribosomal protein L11 methyltransferase [Clostridium
           carboxidivorans P7]
          Length = 311

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 58/155 (37%), Gaps = 32/155 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   +I D+GTG+G + +   K     + +GVD+   A++ A  N   N V +    L  
Sbjct: 175 KPESKIFDIGTGSGILAITAAK-LKAKEVIGVDLDPVAVKSASENVKYNDV-DNIKILHG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    V+G  D++V+N           +  +V  F                  + DGV  
Sbjct: 233 NLMEVVQGKADIVVAN-----------IIADVIIF------------------LTDGVKD 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNA 249
            +   G      I  ++K DVV   ES    +   
Sbjct: 264 FIVPGGRFICSGIILDRKDDVVNKLESSGFNIEEV 298


>gi|332363272|gb|EGJ41057.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK49]
          Length = 189

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 59/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      ++G FD I                             GG  G
Sbjct: 76  HFGC-HNVRLHQGLAPIELDGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  ++ +   G   +  I     ++  +I E      +   
Sbjct: 108 --NIQEIFDWCAQLMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|313204500|ref|YP_004043157.1| methyltransferase small [Paludibacter propionicigenes WB4]
 gi|312443816|gb|ADQ80172.1| methyltransferase small [Paludibacter propionicigenes WB4]
          Length = 254

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 47/214 (21%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG   FY+        TF   P + +L+ + +               +D G G G + + 
Sbjct: 5   LGKFKFYHPV-----GTFSLTPASNILIQAIIDNQSLLHGTG-----IDWGCGVGCLAIL 54

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----------VEG 163
             +     K  G+DI+   ++ A  N   N V+++   + +D +             ++G
Sbjct: 55  AARIKGVDKVYGLDIAQPNIDAAIINGQENQVADKLVFMPADSYQPFSQQHQSELEKMKG 114

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             D I++NPP                         G DG +  R + +G   +L   G+ 
Sbjct: 115 KIDFIIANPPSST----------------------GDDGFAFRRMVLNGAKNYLGDGGIV 152

Query: 224 SVEIGYNQK----VDVVRIFESRKLFLVNAFKDY 253
            + I +         + +  E      V A  DY
Sbjct: 153 LLNISFQYGMQRIESLYKNIEGFSYSGVAASTDY 186


>gi|229525277|ref|ZP_04414682.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
 gi|229338858|gb|EEO03875.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
          Length = 244

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 52/166 (31%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    L + S           L    L   LP +      +++D+G G G +   + K +
Sbjct: 71  YQGHELIIRSLPGVFSHGEFDLGSRLLLDILPALNG----KVIDIGCGAGVLGCVMAKLN 126

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P       DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 127 PNIALEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 184

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 185 TSYNATE---------------------RLLAESVDHLASGGSIWV 209


>gi|148979052|ref|ZP_01815297.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3]
 gi|145962025|gb|EDK27313.1| 16S RNA G1207 methylase RsmC [Vibrionales bacterium SWAT-3]
          Length = 340

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 66/174 (37%), Gaps = 38/174 (21%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           +G +   ++ +      F        ++LL+D     +LP ++     ++LD G G G +
Sbjct: 167 IGEQ---SLTVKSLPGVFSHGEFDVGSQLLLD-----TLPTLKG----KVLDFGCGAGVL 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +   +P  +    DIS  A+  +++    NG++ +     SD +S     +  I+SN
Sbjct: 215 GAVMASRNPDIELEMCDISAFAVASSQATLEANGLTGKVFA--SDVYSDTAQDYQFIISN 272

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+   +       E                     T+     ++LN+ G   +
Sbjct: 273 PPFHSGLDTSYSATE---------------------TLLAQAPQYLNRSGELII 305


>gi|110799361|ref|YP_696707.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           ATCC 13124]
 gi|122958752|sp|Q0TNT3|PRMA_CLOP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|110674008|gb|ABG82995.1| ribosomal protein L11 methyltransferase [Clostridium perfringens
           ATCC 13124]
          Length = 313

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTG+G + L +  +      +GVD+   A++ AK N   N V +  + L  
Sbjct: 176 KADTTVFDIGTGSGILAL-VASKLGAKHVLGVDLDPVAVDSAKENISFNNV-DNIEVLYG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--- 212
           +    V+G  D++V+N   I + I+  L  +V+      +L+   DG+     I      
Sbjct: 234 NLLDVVDGKADIVVAN---IIAEIICILVDDVKK-----ALN--KDGIFITSGIIHERRQ 283

Query: 213 -VSRHLNKDGLCSVEIGYN 230
            V   L ++G   +E+  +
Sbjct: 284 MVIDKLEQEGFEVMEVNKD 302


>gi|226222798|ref|YP_002756905.1| hypothetical protein Lm4b_00166 [Listeria monocytogenes Clip81459]
 gi|255522070|ref|ZP_05389307.1| hypothetical protein LmonocFSL_12780 [Listeria monocytogenes FSL
           J1-175]
 gi|225875260|emb|CAS03957.1| unnamed protein product [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328468493|gb|EGF39499.1| hypothetical protein LM1816_04427 [Listeria monocytogenes 1816]
 gi|328469707|gb|EGF40629.1| hypothetical protein LM220_06347 [Listeria monocytogenes 220]
          Length = 257

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK +   N + ++ + ++ D     +      
Sbjct: 66  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 124

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 125 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 175 GKANFVHRPERLLDIIDIMRKYRL 198


>gi|119960795|ref|YP_949032.1| transferase [Arthrobacter aurescens TC1]
 gi|119947654|gb|ABM06565.1| putative transferase [Arthrobacter aurescens TC1]
          Length = 575

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 62/192 (32%), Gaps = 24/192 (12%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                 R +  L +  A    +    ++   R LD+GTG G     LL           D
Sbjct: 184 PGVL--RHDHVLGIGRASTTLVQSTFRKHTKRALDVGTGCGIQTFHLLHHCE--HVTATD 239

Query: 129 ISCKALEIAKSNAVT---------NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
           IS +AL   + N +          N +  R           V G  F ++VSNPP++ + 
Sbjct: 240 ISERALAFTRFNLLLNAAELELDPNHLEGRVSLRLGSLLEPVAGEQFGLVVSNPPFVITP 299

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EI--GYNQK 232
                       +     DGG+ G     ++   ++  L   G   +    E+  G + K
Sbjct: 300 RTGGES----SSEQFTYRDGGLPGDDIVASLVQSLAEVLEAGGTAQMLGNWEVTSGTDWK 355

Query: 233 VDVVRIFESRKL 244
                      L
Sbjct: 356 DRPQAWLRDSGL 367


>gi|120597610|ref|YP_962184.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. W3-18-1]
 gi|146294251|ref|YP_001184675.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|226712993|sp|A1RG35|RSMC_SHESW RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712998|sp|A4YA93|RSMC_SHEPC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|120557703|gb|ABM23630.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella sp. W3-18-1]
 gi|145565941|gb|ABP76876.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella putrefaciens
           CN-32]
          Length = 347

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|269219564|ref|ZP_06163418.1| putative methyltransferase small domain protein [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269210806|gb|EEZ77146.1| putative methyltransferase small domain protein [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 216

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L    P  +       +DLG G G + LAL +E+P      VD++ +ALE+ + NA  
Sbjct: 48  AVLLHKAPEPDLGPGDLAIDLGCGWGPLTLALCEEAPGADVWAVDVNERALELTRKNAAR 107

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G S +         +  E    +I SNPP            + R  +   +        
Sbjct: 108 AGFSPKALAADEALAALGERKIQLIWSNPP--------VRIGKARLHELLTTW------- 152

Query: 204 SHYRTIADGVSRHL 217
                +AD  + +L
Sbjct: 153 --IERLADDGAAYL 164


>gi|256821947|ref|YP_003145910.1| methyltransferase small [Kangiella koreensis DSM 16069]
 gi|256795486|gb|ACV26142.1| methyltransferase small [Kangiella koreensis DSM 16069]
          Length = 197

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 32/166 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + ++   +   F PR      +D      L  ++       LDLG G GA+ + + K++P
Sbjct: 25  FPLQFKTTWGLFSPRN-----IDDGTIMLLKYMDIETTDNCLDLGCGYGALGITMAKQAP 79

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
             + + VD    A++ A  N   NGV+       S+ FS+V    F+VI SN        
Sbjct: 80  QGQTLMVDKDFVAVDYANKNCELNGVT-NATARLSNGFSAVTEKNFNVICSN-------- 130

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +V              G              L   G   V
Sbjct: 131 ---IPAKV--------------GNELLYIFLQDAWDRLEPGGTFYV 159


>gi|152993284|ref|YP_001359005.1| hypothetical protein SUN_1698 [Sulfurovum sp. NBC37-1]
 gi|151425145|dbj|BAF72648.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 235

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 54/179 (30%), Gaps = 26/179 (14%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LD+G G G + L L ++    +   +D   K L  A+ N   NG+     +   
Sbjct: 27  HPKGTLLDVGCGVGIISLLLTRDF-KVETSIIDKQEKMLNYARYNFSLNGLD--VKSHLG 83

Query: 156 DWFSSV-EGLFDVIVSNPPYIE-----SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D+   V E  FD IVSNPP+ +     S              P                 
Sbjct: 84  DFTELVTEKRFDYIVSNPPFYDPRVTQSEDSHLNIARYAHHLP-------------IEAF 130

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR----VLLFCR 264
              V   L   G         Q   ++   +   +        +   DR    V +  R
Sbjct: 131 FRRVKTFLKPKGWFIFCYDAKQIDLLLHHLKINGINPEKVQFVHSKIDRESKLVFIAAR 189


>gi|77361168|ref|YP_340743.1| ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588435|sp|Q3IHQ6|RLMG_PSEHT RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|76876079|emb|CAI87301.1| Putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G966
           methyltransferase) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 382

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
                   T+S+       ++  +        LP  E      I+DLG G G V L  L 
Sbjct: 195 WPLEGTDFTISNHANVFSRDSLDIGARFFFNYLP--ETNKAKSIIDLGCGNGVVGLMALS 252

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVE-GLFDVIVSNPPY 174
             P      VD S  A+E A+ N   N  +  E+   +++D  S  E    D+++ NPP+
Sbjct: 253 RCPNANITFVDESYMAVESARLNVELNMEAKYEQCSFVENDCLSGFERDSVDMVLCNPPF 312

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            ++         V D                   +       L + G   + IG   
Sbjct: 313 HQA-------QAVTDH--------------IAWQMFKEAKDTLKEGGELRI-IGNRH 347


>gi|46906401|ref|YP_012790.1| hypothetical protein LMOf2365_0180 [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47092852|ref|ZP_00230635.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|46879665|gb|AAT02967.1| conserved hypothetical protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47018756|gb|EAL09506.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
           H7858]
 gi|332310577|gb|EGJ23672.1| hypothetical protein yabB [Listeria monocytogenes str. Scott A]
          Length = 253

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 13  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 61

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK +   N + ++ + ++ D     +      
Sbjct: 62  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 120

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 121 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 170

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 171 GKANFVHRPERLLDIIDIMRKYRL 194


>gi|269123723|ref|YP_003306300.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
 gi|268315049|gb|ACZ01423.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
          Length = 202

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            K++  ++LD+G G G V L L K     K V  D++ +ALE+A  N   N V + ++  
Sbjct: 56  NKKEKFKLLDIGCGYGTVTLLLSKFYKHSKYVLTDVNDRALELADINCKNNMVED-YEIY 114

Query: 154 QSDWFSSVEGLFDVIVSNPP 173
           +S+ F ++   FD+I+SNPP
Sbjct: 115 KSNSFENIHENFDIIISNPP 134


>gi|56751193|ref|YP_171894.1| hypothetical protein syc1184_c [Synechococcus elongatus PCC 6301]
 gi|140216|sp|P08442|Y1184_SYNP6 RecName: Full=Uncharacterized protein syc1184_c
 gi|48010|emb|CAA28921.1| unnamed protein product [Synechococcus elongatus PCC 6301]
 gi|56686152|dbj|BAD79374.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 417

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 35/165 (21%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A AF   R  +    RILD G GTG     L   +P  +   +DIS   L +A+     +
Sbjct: 59  AYAFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRS 118

Query: 145 GVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           GV++R    Q   +    + G FD I                + V               
Sbjct: 119 GVADRIHFQQLSLYDVAQLPGEFDQINC--------------VGVLHH------------ 152

Query: 203 LSHYRTIADGVSRHLNKDGLCSV----EIGY---NQKVDVVRIFE 240
           L         ++  L   G+  +    EIG     Q  + + + +
Sbjct: 153 LEDPDRGLAALASKLAPGGILHIFVYAEIGRAEIRQMQEAIALLQ 197


>gi|294637620|ref|ZP_06715899.1| SAM-dependent methyltransferase [Edwardsiella tarda ATCC 23685]
 gi|291089175|gb|EFE21736.1| SAM-dependent methyltransferase [Edwardsiella tarda ATCC 23685]
          Length = 218

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            D   ILD+G+G+G + L + + S   +  GV+I   A      N + +   +R      
Sbjct: 18  GDERHILDIGSGSGVLALMMAQRS-RAQIDGVEIEPLAAGQGAENFLASPWPDRLTMHPL 76

Query: 156 DW--FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               F++V    +D+IVSNPPY    +                     D L H +T+   
Sbjct: 77  SLQAFAAVTTRRYDLIVSNPPYFSPGVACRTAARATAR--------YTDSLDH-QTLLRQ 127

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN--AFKDYGGND--RVLLF 262
            +   +  G  ++ +  +    V+R  ++   F ++  A +D       R LL 
Sbjct: 128 AAALSSAQGRLALVLPIDAAEAVIRHAQACGWFPLHQTAVRDRAEKPVRRALLL 181


>gi|167647339|ref|YP_001685002.1| methyltransferase small [Caulobacter sp. K31]
 gi|167349769|gb|ABZ72504.1| methyltransferase small [Caulobacter sp. K31]
          Length = 245

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+++ G G G   LA        + VG++    A ++A+ N   NG+++R + +  
Sbjct: 38  HPGERVIEAGCGVGGALLAAASRRKGARFVGLERDPAAADLARGNIALNGLADRVEVVTG 97

Query: 156 DW---FSSVE-GLFDVIVSNPPYIES 177
           D    F +++  +FD ++SNPP+ + 
Sbjct: 98  DIERGFRALDLPVFDAVISNPPFFDD 123


>gi|229470432|sp|B0TR07|RLMG_SHEHH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 421

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  A+ N  
Sbjct: 218 DIGARIMLDNMPKGDFKSIVDLGCGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWA 277

Query: 143 TNGVSE------RFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  + +   F  D+I+ NPP+ +   +             I
Sbjct: 278 LNKLDNPALVGEQATFGWDDCLTHMSEGFRPDLILCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLDAFRRLKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|167625103|ref|YP_001675397.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355125|gb|ABZ77738.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 432

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  A+ N  
Sbjct: 229 DIGARIMLDNMPKGDFKSIVDLGCGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWA 288

Query: 143 TNGVSE------RFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  + +   F  D+I+ NPP+ +   +             I
Sbjct: 289 LNKLDNPALVGEQATFGWDDCLTHMSEGFRPDLILCNPPFHQGEAITD----------HI 338

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 339 AW-----------QMFLDAFRRLKNGGILHV-VGNRHLAYHVKLQRIFKNC 377


>gi|163802390|ref|ZP_02196284.1| putative methyltransferase [Vibrio sp. AND4]
 gi|159173919|gb|EDP58733.1| putative methyltransferase [Vibrio sp. AND4]
          Length = 384

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 77/193 (39%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           N++L    + +     +   +D    F L  + +   ++ I+DLG G G + + + + +P
Sbjct: 199 NIQLKNLPNVY-----SGENLDLGARFMLQHLPQDPALKHIIDLGCGNGVLSVKVGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             +   VD S  A+E AK N + N  + R    + ++   S      D+++ NPP+ +  
Sbjct: 254 NARLTCVDESFMAVESAKQNLIDNLGNTRDIQCIANNCLDSFAPDSADMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + LN+ G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQILNQGGKLLVIGNRHLGYD--AK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + LV
Sbjct: 351 LKRLFGDKNVRLV 363


>gi|327440959|dbj|BAK17324.1| ribosomal protein L11 methylase [Solibacillus silvestris StLB046]
          Length = 312

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 54/219 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+      R T+      ++P    EL+++     +         V        
Sbjct: 112 TAWKQYYHPVKISERFTIVPTWEDYKPVSTDELIIELDPGMAFGTGTHPTTVMCLQALEK 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +             +D+   A+  A+ N   N +S+  +  
Sbjct: 172 VVQHDHTVVDVGTGSGVLSIGAAMLGAKS-VHALDLDEVAVNAARENVELNKMSDIVEVF 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +   +V+   D++V+N                      ++            +  D  
Sbjct: 231 HGNLLDTVKEPADIVVAN---------------------ILA--------EIIMSFTDDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
              +   G+      IG   K DV    E     +    
Sbjct: 262 FSIVKPGGIYVTSGIIGAK-KDDVKAALEKAGFVIEEVL 299


>gi|328551735|gb|AEB22227.1| methyltransferase [Bacillus amyloliquefaciens TA208]
          Length = 247

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S           I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGNIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G V L LL         GV+I  +  ++A  +   NG+  +   +  D  +  +      
Sbjct: 57  GIVPL-LLSTRSKADITGVEIQERLYDMALRSVEYNGLGGQISLIHDDLKNMPDRLGHNK 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          L   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKEAEQNLNEHLRIARHEILCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKTYRIE 190


>gi|325685957|gb|EGD28020.1| O-methyltransferase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 336

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E I  +LG +    +++     +F    +T LL   A          ++  ++++L +
Sbjct: 6   ENERIDYMLGEQ----LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSKVVELCS 55

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G  A  L +           V++    +  A+ +   N + +R    Q +   +     +
Sbjct: 56  GNAAASLYMA-AFNKAHYDDVELQEDMVSKARRSVELNDMQDRITVYQGNVKDAGSFLRK 114

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +DV+V NPPY ++     L  +    +   +  I+L            I    +  L 
Sbjct: 115 DSYDVVVVNPPYFKAPAGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLK 164

Query: 219 KDGLCSVEI 227
             G   +  
Sbjct: 165 MKGKMFMVH 173


>gi|299535790|ref|ZP_07049111.1| ribosomal protein L11 methyltransferase [Lysinibacillus fusiformis
           ZC1]
 gi|298728990|gb|EFI69544.1| ribosomal protein L11 methyltransferase [Lysinibacillus fusiformis
           ZC1]
          Length = 313

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFS------------LPRIEK 95
             W+ +Y+      R T+      + P    EL+++     +            L  +EK
Sbjct: 112 TAWKQYYHPVKISERFTIVPTWEEYTPVSTDELIIELDPGMAFGTGTHPTTVMCLQGLEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++   ++D+GTG+G + +             +D+   A+  A+ N   N V ++    
Sbjct: 172 VIKEGDTVVDIGTGSGVLSIGAALLGAKS-VHALDLDEVAVRSARENVALNKVEDKVAVF 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
             +   +V+   DV+V+N
Sbjct: 231 HGNLLDTVKEPADVVVAN 248


>gi|300214873|gb|ADJ79289.1| Methyltransferase [Lactobacillus salivarius CECT 5713]
          Length = 203

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 37/183 (20%)

Query: 62  NVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+  T  +  F        T +L+++  A         D  +ILD+G G G + L++ K 
Sbjct: 27  NIHFTTDNGVFSKNTVDFGTRVLLETIDANL-----DLDNKKILDMGCGYGPIGLSIAKA 81

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
            P  +   VD++  ALE+AK     N      +  +S  +  +    +D+I++NPP    
Sbjct: 82  YPNSQIDMVDVNELALELAKK-NAANNNINNVEIFKSSQYEDINETDYDLIITNPPIRA- 139

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DV 235
                                   G      I  G  +HLN  G     I   Q     +
Sbjct: 140 ------------------------GKDVVHGILAGSKQHLNSGGSIVAVIQKKQGAPSAI 175

Query: 236 VRI 238
            ++
Sbjct: 176 KKL 178


>gi|302343726|ref|YP_003808255.1| ribosomal protein L11 methyltransferase [Desulfarculus baarsii DSM
           2075]
 gi|301640339|gb|ADK85661.1| ribosomal protein L11 methyltransferase [Desulfarculus baarsii DSM
           2075]
          Length = 318

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 30/148 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + LA  K     K V +DI  +A+     NA+ NG++ + +   +     
Sbjct: 188 VLDVGCGSGILALAAAK-LGVPKVVAIDIDPEAVRCTAENAMHNGLAAQIEVSDTSL-EQ 245

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G F ++++N   + +  +  L       +P  +                 +  +L   
Sbjct: 246 VRGRFALVMAN---LTAKDLIELA------EPLRA--------------KMELGGYLICS 282

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G+        Q   V ++FE   L L+ 
Sbjct: 283 GML-----TTQLDQVRQVFEGLGLSLIE 305


>gi|222100464|ref|YP_002535032.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
           4359]
 gi|254783321|sp|B9K9N3|PRMA_THENN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221572854|gb|ACM23666.1| Ribosomal protein L11 methyltransferase [Thermotoga neapolitana DSM
           4359]
          Length = 264

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R++D+G GTG + + + K+      + VD+  +A+E+AK N   N V       +S
Sbjct: 128 KKGDRVVDVGCGTGILAI-VAKKLGASYVMAVDVDEQAVEVAKENVQKNSVDVIVK--RS 184

Query: 156 DWFSSVEGLFDVIVSN 171
           D  S V+G+FD++VSN
Sbjct: 185 DLLSEVDGVFDLVVSN 200


>gi|81299140|ref|YP_399348.1| hypothetical protein Synpcc7942_0329 [Synechococcus elongatus PCC
           7942]
 gi|81168021|gb|ABB56361.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 414

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 35/165 (21%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A AF   R  +    RILD G GTG     L   +P  +   +DIS   L +A+     +
Sbjct: 56  AYAFCTGRAPQLGRPRILDAGCGTGVSTDYLAHLNPSAEITAIDISAGTLAVAQERCQRS 115

Query: 145 GVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           GV++R    Q   +    + G FD I                + V               
Sbjct: 116 GVADRIHFQQLSLYDVAQLPGEFDQINC--------------VGVLHH------------ 149

Query: 203 LSHYRTIADGVSRHLNKDGLCSV----EIGY---NQKVDVVRIFE 240
           L         ++  L   G+  +    EIG     Q  + + + +
Sbjct: 150 LEDPDRGLAALASKLAPGGILHIFVYAEIGRAEIRQMQEAIALLQ 194


>gi|226713006|sp|A1S321|RSMC_SHEAM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 341

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  + K +  R+LD G G G + +AL++++P  +   VDI+  AL   + +  
Sbjct: 187 DQGTALLLDNLPKLEG-RVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLK 245

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            NG+  +     SD  +  +GLF+ IVSNPP+ +
Sbjct: 246 ANGMEAKV--YASDGLAQTDGLFNAIVSNPPFHD 277


>gi|110680570|ref|YP_683577.1| hypothetical protein RD1_3399 [Roseobacter denitrificans OCh 114]
 gi|109456686|gb|ABG32891.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 246

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 56/172 (32%), Gaps = 14/172 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +P+      VD  L      ++ R   R+LDLG G GA  L L    P     GV+   
Sbjct: 18  LQPKSGYRAGVDPVL--LAATVDARAGDRVLDLGCGVGAAALCLGARVPGLVLTGVERQP 75

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              ++A+ N          D          E  FD +++NPPY +           RD  
Sbjct: 76  VYADLARRNGGAAFEVVTADIADLPLHIR-ERQFDHVLANPPYYKRSD----SRAARDLT 130

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              +L G    L+ +       ++ L   G         +   +  I     
Sbjct: 131 REAAL-GEETPLADW---IKTAAKRLAPKGHAHFIH---RVERLPEILTEMG 175


>gi|308171925|ref|YP_003918630.1| methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|307604789|emb|CBI41160.1| putative methyltransferase [Bacillus amyloliquefaciens DSM 7]
 gi|328909995|gb|AEB61591.1| putative methyltransferase [Bacillus amyloliquefaciens LL3]
          Length = 247

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S           I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGNIVDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G V L LL         GV+I  +  ++A  +   NG+  +   +  D  +  +      
Sbjct: 57  GIVPL-LLSTRSKADITGVEIQERLYDMALRSVEYNGLGGQISLIHDDLKNMPDRLGHNK 115

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY          L   +R    +   +L            +    S+ L + 
Sbjct: 116 YDVVTCNPPYFKTPKEAEQNLNEHLRIARHEILCTL----------EDVISVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K + + 
Sbjct: 166 GKAALVH---RPGRLLEIFELMKAYRIE 190


>gi|171920142|ref|ZP_02691338.2| DNA methylase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902509|gb|EDT48798.1| DNA methylase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 255

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 14/170 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   +  +   +IL++GT   A+ + L       K   ++I  +A+ +A  N 
Sbjct: 29  IDTILLANFISLSSK-TKKILEIGTNNAALSIFLASRKEDIKIDAIEIQIEAINLALLNI 87

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             N   ++ + + +D+    +         +D I+ NPP+ +    D +    ++  P  
Sbjct: 88  SQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQ---DKIIPSTKN--PLK 142

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L      L+    I  G ++ + + G  ++ I   + VD++ I    + 
Sbjct: 143 TLALYEITLNF-EQIMQGCAKIIKQKGNLAMVIPTTRLVDLLEIMRKYQF 191


>gi|116871566|ref|YP_848347.1| methyltransferase small domain-containing protein [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|116740444|emb|CAK19564.1| methyltransferase small domain protein [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 250

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 22/200 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + ++ + ++ D     +      
Sbjct: 59  GIIPL-LLSTRTEAQIVGVEIQERLADMAKRSVAYNQLEDQIEIMEYDLNKITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            D++  NPPY  +             +         + +          +  L + G  +
Sbjct: 118 ADIVTCNPPYFAT------PATSLKNENEHYRIARHEIMCTLEDTIRVAASLLKQGGKAN 171

Query: 225 VEIGYNQKVDVVRIFESRKL 244
                 + +D++ +    +L
Sbjct: 172 FVHRPERLLDIIDLMRKYRL 191


>gi|302389475|ref|YP_003825296.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Thermosediminibacter oceani DSM 16646]
 gi|302200103|gb|ADL07673.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Thermosediminibacter oceani DSM 16646]
          Length = 314

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       RL +        PE   +V                 A  L  +EK   
Sbjct: 112 WKAYYKTIHIGKRLVIRPSWIHYEPEKGEVVVELDPGMAFGTGTHETTAMCLELLEKYIE 171

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D+G G+G + +A  K     K + +D    A+++A+ N   N  ++  + ++ +
Sbjct: 172 GGETVIDVGCGSGILSIAAAKLGAG-KVLAIDKDEVAVKVARENIKRNDTTQAVEVIKGE 230

Query: 157 WFSSVEGLFDVIVSN 171
               V+   D+IV+N
Sbjct: 231 GLDCVDAKADIIVAN 245


>gi|119773707|ref|YP_926447.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella amazonensis
           SB2B]
 gi|119766207|gb|ABL98777.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella amazonensis SB2B]
          Length = 320

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  + K +  R+LD G G G + +AL++++P  +   VDI+  AL   + +  
Sbjct: 166 DQGTALLLDNLPKLEG-RVLDFGCGAGVIAIALMQQNPGLQLECVDINAMALLSCELSLK 224

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            NG+  +     SD  +  +GLF+ IVSNPP+ +
Sbjct: 225 ANGMEAKV--YASDGLAQTDGLFNAIVSNPPFHD 256


>gi|296122425|ref|YP_003630203.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
 gi|296014765|gb|ADG68004.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
          Length = 390

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 30/163 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+      F  R      +D      +  IE  +  +I+DLG G+G V +A     P  
Sbjct: 193 IRMKSRPGVFAHRK-----LDVGARTLISVIEPMEQGQIVDLGCGSGGVAVAAALRHPEL 247

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             + VD + +A+E  +  A  NG S     L +   S      DV+ +NPPY  +  +  
Sbjct: 248 DVLAVDSNPRAIECTQWAAKENGTSRVQTRLDATGKSLESNSVDVVYANPPYFSNYKIAG 307

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +                           +   R L   G   +
Sbjct: 308 I-------------------------FIETAFRILIPGGRIYI 325


>gi|157157132|ref|YP_001464546.1| methyltransferase family protein [Escherichia coli E24377A]
 gi|229470500|sp|A7ZRW7|RLMG_ECO24 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157079162|gb|ABV18870.1| methyltransferase family protein [Escherichia coli E24377A]
          Length = 378

 Score = 70.9 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRMNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S V+   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVKPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|262172301|ref|ZP_06039979.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
 gi|261893377|gb|EEY39363.1| 16S RNA G1207 methylase RsmC [Vibrio mimicus MB-451]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPTLSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   + N +  R     SD FS  +  +D +V+NPP+   + 
Sbjct: 223 PNIELEMTDISALAIRSSQETLLANQL--RGTVYPSDMFSDTKHKYDYVVTNPPFHSGLD 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL + G   V
Sbjct: 281 TSYSATE---------------------RLLAESVNHLTQTGSIWV 305


>gi|289425973|ref|ZP_06427720.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|289427910|ref|ZP_06429614.1| methyltransferase small domain protein [Propionibacterium acnes
           J165]
 gi|295131577|ref|YP_003582240.1| methyltransferase small domain protein [Propionibacterium acnes
           SK137]
 gi|289153516|gb|EFD02230.1| methyltransferase small domain protein [Propionibacterium acnes
           SK187]
 gi|289158793|gb|EFD06993.1| methyltransferase small domain protein [Propionibacterium acnes
           J165]
 gi|291375976|gb|ADD99830.1| methyltransferase small domain protein [Propionibacterium acnes
           SK137]
 gi|332676445|gb|AEE73261.1| putative rRNA small subunit methyltransferase [Propionibacterium
           acnes 266]
          Length = 334

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 197 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 255

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 256 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 294

Query: 222 LCSV 225
               
Sbjct: 295 TLWC 298


>gi|262401679|ref|ZP_06078245.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
 gi|262352096|gb|EEZ01226.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC586]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 29/165 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +      F        L    L  +LP+++     +++D+G G G +   +   +P
Sbjct: 170 HGLTIRSLPGVFSHGEFD--LGSRLLLDTLPKLDG----KVIDIGCGAGVLGCVMATLNP 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    DIS  A+  ++     N +  R     SD FS     +D IV+NPP+   +  
Sbjct: 224 EIELEMTDISALAIRSSQETLQANQLRGRV--YPSDMFSDTGTQYDYIVTNPPFHSGLDT 281

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                E                      +      HL   G   +
Sbjct: 282 SYSATE---------------------NLLAESVNHLVPTGSLWI 305


>gi|255659201|ref|ZP_05404610.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
           20544]
 gi|260848653|gb|EEX68660.1| ribosomal protein L11 methyltransferase [Mitsuokella multacida DSM
           20544]
          Length = 314

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 30/129 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +R+ D+GTG+G + +A  K     + V +D    A  +A+ N   N V +R  T  S
Sbjct: 173 KGGMRVFDVGTGSGVLAVAAAKLGAG-EVVAMDYDRTAATVAQENVERNHVEDRVTTGVS 231

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D   +  G  D+I++N                      I+             + D +  
Sbjct: 232 DLLKAFTGKADLIIAN---------------------IIA--------DIVIRLFDELDE 262

Query: 216 HLNKDGLCS 224
           HL + G   
Sbjct: 263 HLAEGGHLL 271


>gi|13357865|ref|NP_078139.1| hypothetical protein UU305 [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762270|ref|YP_001752387.1| DNA methylase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508738|ref|ZP_02690176.2| DNA methylase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186701777|ref|ZP_02554147.2| DNA methylase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|11356794|pir||H82906 conserved hypothetical UU305 [imported] - Ureaplasma urealyticum
 gi|6899281|gb|AAF30714.1|AE002128_2 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827847|gb|ACA33109.1| dna methylase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675667|gb|EDT87572.1| DNA methylase [Ureaplasma parvum serovar 14 str. ATCC 33697]
 gi|186701053|gb|EDU19335.1| DNA methylase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 255

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 72/170 (42%), Gaps = 14/170 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +   +  +   +IL++GT   A+ + L       K   ++I  +A+ +A  N 
Sbjct: 29  IDTILLANFISLSSK-TKKILEIGTNNAALSIFLALRKEDIKIDAIEIQIEAINLALLNV 87

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             N   ++ + + +D+    +         +D I+ NPP+ +    D +    ++  P  
Sbjct: 88  SQNHFEKQINIIHADFNQYWKDFDKSENNKYDAIICNPPFYKQ---DKIIPSTKN--PLK 142

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +L      L+    I  G ++ + + G  ++ I   + VD++ I    + 
Sbjct: 143 TLALYEITLNF-EQIMQGCAKIIKQKGNLAMVIPTTRLVDLLEIMRKYQF 191


>gi|268319250|ref|YP_003292906.1| hypothetical protein FI9785_765 [Lactobacillus johnsonii FI9785]
 gi|262397625|emb|CAX66639.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
           johnsonii FI9785]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL          + +  D  +++DL +G GA  + +      
Sbjct: 17  DLQIIQEKDAFSFSLDTLLL------GYFAQNKIHDNYKVVDLCSGNGAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +  + A+ +   N +  R +    +   +     +  +DV+V NPPY + 
Sbjct: 70  AHYDAVEIQKEIADQARRSIKLNKLENRIEVHCLNALDAPKKLGKDKYDVVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHIVNPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|260584581|ref|ZP_05852327.1| methyltransferase [Granulicatella elegans ATCC 700633]
 gi|260157604|gb|EEW92674.1| methyltransferase [Granulicatella elegans ATCC 700633]
          Length = 248

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 28/195 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +  SS+ F         +D+ L      I  +    I+DL TG G V   L  ++  
Sbjct: 18  NIDIIQSSEVFSFS------IDAVLLSDFATIPHQRKATIVDLCTGNGVVSFLLSAKTNN 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
            K +GV++     ++A      N + E+ + +Q+D         +   D I  NPPY + 
Sbjct: 72  -KILGVELQEALCDMANRTIQLNQLEEKVEIIQADVREITTILKKDSIDFITCNPPYFKL 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                +  +    +   +  + L            +   +S  L   G   +    +   
Sbjct: 131 QEQALVNQKEAFTIARHEIHLPL----------EELLQNISGLLKMKGKAFIVHRPD--- 177

Query: 234 DVVRIFESRKLFLVN 248
            +  I  + +L+ + 
Sbjct: 178 RLTDILTTARLYRLE 192


>gi|227890238|ref|ZP_04008043.1| O-methyltransferase [Lactobacillus johnsonii ATCC 33200]
 gi|227849240|gb|EEJ59326.1| O-methyltransferase [Lactobacillus johnsonii ATCC 33200]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL          + +  D  +++DL +G GA  + +      
Sbjct: 17  DLQIIQEKDAFSFSLDTLLL------GYFAQNKIHDNYKVVDLCSGNGAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +  + A+ +   N +  R +    +   +     +  +DV+V NPPY + 
Sbjct: 70  AHYDAVEIQKEIADQARRSIKLNKLENRIEVHCLNALDAPKKLGKDKYDVVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHIVNPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|319427613|gb|ADV55687.1| methyltransferase small [Shewanella putrefaciens 200]
          Length = 347

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      +DI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPHLSLECIDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|89052980|ref|YP_508431.1| methyltransferase small [Jannaschia sp. CCS1]
 gi|88862529|gb|ABD53406.1| methyltransferase small [Jannaschia sp. CCS1]
          Length = 247

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 34/182 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  +L+LG G G   L L    P  +  GV+      ++A+ N          D +
Sbjct: 44  PATTGESVLELGCGVGVAALCLQARVPGVEVTGVERQAAYADLARRNG--------VDVV 95

Query: 154 QSDWFS---SVEGL-FDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           Q+D  S   ++    FD +++NPPY    +   D    E    +  ++  G         
Sbjct: 96  QADLTSLPTALRQRSFDHVIANPPYYGPGTGSDDAGRDEALREETPLAEWG--------- 146

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-----RVLLF 262
            I       L   G  ++     +  DV+          ++        +     RV++ 
Sbjct: 147 RI---ARARLIPGGWLTMIHMAERLPDVLGALT--GFGSISVLP-LAAREGRAAGRVVVR 200

Query: 263 CR 264
            R
Sbjct: 201 AR 202


>gi|298243473|ref|ZP_06967280.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
           DSM 44963]
 gi|297556527|gb|EFH90391.1| ribosomal protein L11 methyltransferase [Ktedonobacter racemifer
           DSM 44963]
          Length = 306

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 39/198 (19%)

Query: 57  WRDFYNVRLT-------LSSDTFEPRPETELL-----------VDSALAFSLPRIEKR-- 96
           W+++Y+V L         S   + P+PE  +L           +       L ++EKR  
Sbjct: 104 WKEYYHVTLIGERLVIRPSWREYTPKPEEVVLTLDPGMAFGTGLHPTTRMCLEQLEKRVT 163

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT---- 152
             +RILD+GTG+G + +A  K    F    +D S  A E A  NA  N ++ER       
Sbjct: 164 PGMRILDVGTGSGILAIAAAKLGAEF-IHAIDNSSVATESASENAALNELAERVKVELGE 222

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD- 211
           L  +    ++G +D++V+N   I + ++  +        P+++      GL     I + 
Sbjct: 223 LTPESAGQMKGQYDIVVAN---IIAHVIGAIA-------PQLATTVAPGGLLVVSGIIEA 272

Query: 212 ---GVSRHLNKDGLCSVE 226
                   L + GL  VE
Sbjct: 273 RRPDAEGPLLETGLELVE 290


>gi|227496765|ref|ZP_03927038.1| methyltransferase [Actinomyces urogenitalis DSM 15434]
 gi|226833718|gb|EEH66101.1| methyltransferase [Actinomyces urogenitalis DSM 15434]
          Length = 425

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 66/179 (36%), Gaps = 27/179 (15%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L +  A         ++ V   LDLG G G   L LL+ +     V  DIS +AL 
Sbjct: 53  PDHVLGIGGAGLTLASLTPRQPVRTALDLGCGCGIQTLYLLQHAE--HVVATDISTRALA 110

Query: 136 IAKSNAVTNGVS-ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD---- 189
               NA   G   ER + +Q  +   V G  FD+I +NPP++ +         VR+    
Sbjct: 111 FTAFNAALAGADPERLELVQGSFLEPVAGRRFDLIATNPPFVLT------PPAVREAGLP 164

Query: 190 -FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIG--YNQKVDVVRIFES 241
             + R +      G      +   +  HL   G   +    E     + +  V     +
Sbjct: 165 LMEYRDA------GRPVLPELVPALGDHLEVGGTVVMLGNWEHHRFQDWRERVEAWLPA 217


>gi|167622638|ref|YP_001672932.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|226712991|sp|B0TSU8|RSMC_SHEHH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|167352660|gb|ABZ75273.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 341

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +   ++LD G G G +  ALLK  P      VDI+  AL   +     NG + +     
Sbjct: 199 PKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALASCEFTLQANGFNAKIFA-- 256

Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176
           SD  +   G +D I+SNPP+ +
Sbjct: 257 SDGLAQAAGRYDGIISNPPFHD 278


>gi|330686063|gb|EGG97685.1| methyltransferase small domain protein [Staphylococcus epidermidis
           VCU121]
          Length = 241

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 32/207 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  + D F    +  LL D          E R   +I+D+ +G G + L L  +   
Sbjct: 15  DLKIIQNDDVFSFSTDALLLGDF--------TEIRKKDKIIDICSGNGVIPLILSHKGSQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPYIES 177
               G++I  + +++A+ +   N + +R      D    +       + V+  NPPY + 
Sbjct: 67  -TIEGIEIQQQLVDMAQRSFKYNQLDDRLLMHHMDVKNVYHYFKPSQYTVVTCNPPYFKD 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             +     E       +    L                    L + G   +     +   
Sbjct: 126 NQLHQHQKEAHKIARHEILCKL----------EDCLMAARHLLKQGGRLYMVH---RAER 172

Query: 235 VVRIFESRKLFLVNAFK---DYGGNDR 258
           ++ +    +   +   +    Y  +DR
Sbjct: 173 MMDVLTEMRRVNIEPKRLTFVYSKHDR 199


>gi|258623082|ref|ZP_05718095.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM573]
 gi|258584695|gb|EEW09431.1| Ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM573]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPTLSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  ++   + N +  R     SD  S  +  +D IV+NPP+   + 
Sbjct: 223 PNIELEMTDISALAIRSSQETLLANHL--RGTVYPSDMLSDTKHKYDYIVTNPPFHSGLD 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL + G   V
Sbjct: 281 TSYSATE---------------------RLLAESVNHLTQTGSIWV 305


>gi|108761519|ref|YP_629383.1| putative S-adenosyl-L-methionine: L-methionine S-methyltransferase
           [Myxococcus xanthus DK 1622]
 gi|108465399|gb|ABF90584.1| putative S-adenosyl-L-methionine: L-methionine S-methyltransferase
           [Myxococcus xanthus DK 1622]
          Length = 1031

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 23/200 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L L    F P       ++  L+  L     +   R++++G G+G +C+AL K +   
Sbjct: 67  LELFLLPSIFAPEAWAYTFLEGLLSVPLDEYAGK---RLVEVGAGSGWICIALAKFTRLA 123

Query: 123 KGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSV--EGLFDVIVSNPPYIES 177
              G D++  +  +A+ NA  NG   ++ R    +SD    +  +  +D +V   P +  
Sbjct: 124 HVHGADLNPHSPVVARCNAWLNGDEALASRLSFGESDLLRGIPSDAPWDFVVGCIPQVLR 183

Query: 178 VIVDCLGLEVRDFDPRISLDG----------GID--GLSHYRTIADGVSRHLNKDGLCSV 225
              D L  E+   D   +L              D  GL     + D     L+  G   +
Sbjct: 184 GEED-LPSELSQAD-EQALYDLSNYCTLQNVYEDHFGLGLIARLLDEAPERLSPTGRLLL 241

Query: 226 -EIGYNQKVDVVRIFESRKL 244
              G   +V + R+F  R  
Sbjct: 242 NLAGRPGRVIIERMFTRRGF 261


>gi|325688037|gb|EGD30056.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK72]
          Length = 189

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      +EG FD I                             GG  G
Sbjct: 76  HFGC-HNVRFHQGLAPIELEGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  ++ +   G   +  I     ++  +I E      +   
Sbjct: 108 --NMQEIFDWCAQLMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|172056072|ref|YP_001812532.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
 gi|171988593|gb|ACB59515.1| methyltransferase small [Exiguobacterium sibiricum 255-15]
          Length = 245

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 30/207 (14%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L  E +  +LG       R+  S   F    +  LL   A              +++DL 
Sbjct: 5   LSDERLDHLLGKEG----RIIQSPTVFSYSLDAALLAQFAWVPIQQ-------GKLVDLC 53

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--- 162
            G GA+ L L   +      G++I  + +++A+ +   N   ++   ++ D   + +   
Sbjct: 54  AGNGAIPLFLSYRTKG-TITGLEIQPRLVDMAERSIQMNEKQDQLQMVEGDVKEAGKQLG 112

Query: 163 -GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
            GL+D +  NPPY  +             +   +   +L+         R      +  L
Sbjct: 113 YGLYDAVTCNPPYFLANESSNRNASEHYTIARHEVLCTLE------DCIR----SAADLL 162

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
            + G  +      + +D+V +    +L
Sbjct: 163 KQGGKTAFVHRPERLLDIVTLMRQYRL 189


>gi|219682246|ref|YP_002468630.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
 gi|219621979|gb|ACL30135.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           Tuc7 (Acyrthosiphon pisum)]
          Length = 280

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS          KR   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSKRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N  + +   + S+ +S+V   FD+I+SNPP+   + ++                    
Sbjct: 184 NSNKFNGKI--VYSNLYSNVFKKFDLIISNPPFHNDLQIN-------------------- 221

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +    +  G  ++L K G    
Sbjct: 222 -FNIIEKMICGAKKYLTKTGELRF 244


>gi|328953125|ref|YP_004370459.1| Ribosomal protein L11 methyltransferase [Desulfobacca acetoxidans
           DSM 11109]
 gi|328453449|gb|AEB09278.1| Ribosomal protein L11 methyltransferase [Desulfobacca acetoxidans
           DSM 11109]
          Length = 298

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 45/196 (22%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R  +  L   AL        +     +LD+GTGTG + LA  +     + + +D+  +AL
Sbjct: 141 RHPSTWLCLKALEEVTYNWSQHPPRWVLDVGTGTGILGLAAARL--GARVLAIDVDPEAL 198

Query: 135 EIAKSNAVTNGVSE--RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
             A+ N + N + +  R + L     S++   FD+I +N                     
Sbjct: 199 AAARENILLNELHDLMRVEDLP---LSAIRQQFDLIFAN--------------------- 234

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ--KVDVVRIFESRKLFLVNAF 250
             + D         +T+A+ ++  L  +G   +  G+ Q    ++   F ++ L  V   
Sbjct: 235 LTAPD--------LQTLAESLAGRLLPEGQMII-SGFLQTDLPEMEERFRAQGLQSVQTH 285

Query: 251 --KDYGGNDRVLLFCR 264
              D+     VL+  R
Sbjct: 286 LKDDWA----VLVLKR 297


>gi|167970986|ref|ZP_02553263.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
 gi|186701152|gb|EDU19434.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 6 str. ATCC 27818]
          Length = 367

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 15/164 (9%)

Query: 72  FEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F P+  +ELLV+  L    +  +  +R + ++ D   G+G++ L   K +   K  G +I
Sbjct: 44  FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 103

Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVI---VD 181
           +     +A+ N   + +  ++FD    D       + +  FD IVSNPPY          
Sbjct: 104 NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPYSTKWEGKSNP 163

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L  + R    +++  G  D  +    I       L+  G  ++
Sbjct: 164 LLANDERFHVTQLAPKGKAD-FAFVLHILHN----LSSSGTAAI 202


>gi|13357655|ref|NP_077929.1| type I restriction enzyme M protein (fragment) [Ureaplasma parvum
           serovar 3 str. ATCC 700970]
 gi|170762197|ref|YP_001752181.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|183508500|ref|ZP_02689853.2| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
 gi|11357066|pir||E82933 type I restriction enzyme M protein, truncated homolog UU098
           [imported] - Ureaplasma urealyticum
 gi|6899053|gb|AAF30504.1|AE002110_2 type I restriction enzyme M protein (fragment) [Ureaplasma parvum
           serovar 3 str. ATCC 700970]
 gi|168827774|gb|ACA33036.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 3 str. ATCC 27815]
 gi|182675928|gb|EDT87833.1| type I restriction-modification system, M subunit [Ureaplasma
           parvum serovar 14 str. ATCC 33697]
          Length = 348

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 15/164 (9%)

Query: 72  FEPRPETELLVDSAL--AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           F P+  +ELLV+  L    +  +  +R + ++ D   G+G++ L   K +   K  G +I
Sbjct: 25  FTPQEVSELLVELTLIDFNNENKDVRRKIGKVYDPCCGSGSLLLKYAKLNEGVKFYGQEI 84

Query: 130 SCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVI---VD 181
           +     +A+ N   + +  ++FD    D       + +  FD IVSNPPY          
Sbjct: 85  NLTTYNLARINMFLHNIGYDKFDIKLGDTLLDPKHNDDKPFDAIVSNPPYSTKWEGKSNP 144

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L  + R    +++  G  D  +    I       L+  G  ++
Sbjct: 145 LLANDERFHVTQLAPKGKAD-FAFVLHILHN----LSSSGTAAI 183


>gi|283788330|ref|YP_003368195.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           rodentium ICC168]
 gi|282951784|emb|CBG91493.1| putative ribosomal RNA small subunit methyltransferase D
           [Citrobacter rodentium ICC168]
          Length = 378

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLAKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ +  NPP+ +                + +L   
Sbjct: 274 TNLPDAVDRSEFMINNALSGVEPFRFNAVFCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|193669328|ref|XP_001944973.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like
           [Acyrthosiphon pisum]
          Length = 650

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 20/128 (15%)

Query: 37  FLTNAIVRSLKHE----SIH------RILGWRDFYNVRLTLSSDTF--EPRPETELLVDS 84
                  +    E     +        I+       ++L +S ++F       +E+L D+
Sbjct: 425 LYFQKAKKRAAGEGNSFPLELLHGQGYIVEEVK--GLKLRISPESFFQINTAASEILFDA 482

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   +           +LD+  G+G + L++ K+    + +GV+I  +A+ +AK NA  N
Sbjct: 483 AKDLA----SINSQTTVLDVCCGSGTIGLSIAKDC--AQVIGVEIQEEAVNMAKLNATEN 536

Query: 145 GVSERFDT 152
           G++     
Sbjct: 537 GITNAIFF 544


>gi|262831253|sp|Q8EI95|TRMN6_SHEON RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 236

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   +ILD+G G+G + L +  +    +   V++  KA      N V +  ++R  
Sbjct: 29  WSPLSQAQQILDIGAGSGLLSL-MAAQRSLGRITAVELEEKAAAACLYNMVQSPWADRLS 87

Query: 152 TLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D           G FD I+ NPPY E              D   ++    + L   
Sbjct: 88  VIHCDIQDFCQQTQYHGFFDHIICNPPYFEHGPQAN--------DSHRAMARHTNTLGFA 139

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + D + + L   G  S+ +             S KL L  
Sbjct: 140 -PLLDAIIQCLTPQGYASLILPSQSMPRFKACLTSSKLHLTE 180


>gi|50843494|ref|YP_056721.1| hypothetical protein PPA2050 [Propionibacterium acnes KPA171202]
 gi|50841096|gb|AAT83763.1| conserved protein (putative rRNA small subunit methyltransferase)
           [Propionibacterium acnes KPA171202]
 gi|315107844|gb|EFT79820.1| methyltransferase small domain protein [Propionibacterium acnes
           HL030PA1]
          Length = 334

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 197 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 255

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               D +V+NPP+             +D  P ++             +    +R L   G
Sbjct: 256 NESVDAVVTNPPFHRGT--------AQDHAPTLA-------------MLADAARVLRPGG 294

Query: 222 LCSV 225
               
Sbjct: 295 TLWC 298


>gi|297580750|ref|ZP_06942676.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535166|gb|EFH74001.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+    LT+ S           L    L  +LP +      +++D+G G G +   + K 
Sbjct: 166 DYQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   +
Sbjct: 222 NPHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGG------IDGLSHYRTIADGVSRH 216
                  E    +    L  G       +    Y  I +    H
Sbjct: 280 ETSYSATERLLAESVDHLASGSSIWVVANSFLKYPPILEQAFGH 323


>gi|170017332|ref|YP_001728251.1| ribosomal protein L11 methyltransferase [Leuconostoc citreum KM20]
 gi|226710094|sp|B1MZ55|PRMA_LEUCK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169804189|gb|ACA82807.1| Ribosomal protein L11 methyltransferase [Leuconostoc citreum KM20]
          Length = 292

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 72/215 (33%), Gaps = 53/215 (24%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEK------------ 95
           W+ +Y+        T  P  ET          +++D  LAF     E             
Sbjct: 90  WKAYYHAERVTRHFTVVPSWETYHPNQIDELPIIMDPKLAFGTGTHETTRLMIQALENVV 149

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  K+      +  DI   ++ +AK N   N V++    + S
Sbjct: 150 RGGESMIDVGTGSGVLAVA-AKQLGVAHVLATDIDEMSVNVAKENLRLNPVAQDVTVVAS 208

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  + V     D+IV+N                      ++             +    +
Sbjct: 209 DLLADVVISPVDLIVAN---------------------ILA--------DVIERLIPQTT 239

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
             L   GL  V  I  N  + +  +  +    +V 
Sbjct: 240 TLLKPGGLFLVSGIYDNIALHIEDVLRANDYTIVQ 274


>gi|330718881|ref|ZP_08313481.1| ribosomal protein L11 methyltransferase [Leuconostoc fallax KCTC
           3537]
          Length = 297

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 38/158 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K+    + +  D+   A+++A+ N + N +++    + S
Sbjct: 152 RGGETMLDIGTGSGVLSIA-AKQLGVAQILATDVDDDAVQVARDNLLVNPIAQDVKVIVS 210

Query: 156 DWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  + V+    D+IV+N                      ++             +   + 
Sbjct: 211 DLMAGVDSAPVDLIVAN---------------------ILA--------DVIELLIPQIW 241

Query: 215 RHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVN 248
            +L   G       +E        ++  F      ++ 
Sbjct: 242 GYLKPGGYFMVSGIIEAN---AHHILNQFTDAGYQVIQ 276


>gi|312373088|gb|EFR20910.1| hypothetical protein AND_18315 [Anopheles darlingi]
          Length = 230

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 16/185 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL---LKESPFFKGVGV 127
            +EP  +T L +  AL   L  I+ R  +  +++G G+G +  A+   L  +P    +GV
Sbjct: 16  VYEPAEDTFL-LLDALEDELEDIKARWPLVCVEVGPGSGLLITAIRKCLLHAPLC--LGV 72

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVD-CLGL 185
           DI+  A  +    +  N      D +  D  + +     D++V NPPY+ +  V+  L  
Sbjct: 73  DINPAACRMTLKTSALNAAP--VDAVNMDLLAGLRPHCVDLLVFNPPYVPTGEVEGSLEE 130

Query: 186 EVRDF----DPRI-SLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIF 239
            V +F     P I S  GG DG      +   + R L  DG+   + +  N+  +V+R  
Sbjct: 131 HVDEFRSGPSPIIHSWAGGADGRVVTDRLLGDLERILAPDGVLYLLLLKENRPAEVIRWM 190

Query: 240 ESRKL 244
           E R  
Sbjct: 191 EQRGF 195


>gi|70727523|ref|YP_254439.1| hypothetical protein SH2524 [Staphylococcus haemolyticus JCSC1435]
 gi|68448249|dbj|BAE05833.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 241

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 36/208 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  + D F    +  LL            E R   +ILDL  G G + L L  +   
Sbjct: 15  NLKIIQNDDVFSFSTDALLL--------GHFTEVRKNDKILDLCAGNGVIALLLSAKGSQ 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
                ++I  +  ++A+ +   N ++ R      D     +      + ++  NPPY +S
Sbjct: 67  -TIESIEIQEQLADMARRSFEYNDLTNRLLIHHMDLKDVYQNFKPSQYTLVTCNPPYFKS 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G   +     +   
Sbjct: 126 NQRHQHQKEAHKIARHEIMCTL---EDCMLAARHL-------LKQGGRLMMVH---RAER 172

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLF 262
           ++ +    +   +          RV+  
Sbjct: 173 LMDVLTEMRKASIEPK-------RVVFI 193


>gi|84393814|ref|ZP_00992560.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01]
 gi|84375554|gb|EAP92455.1| 16S RNA G1207 methylase RsmC [Vibrio splendidus 12B01]
          Length = 340

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 35/167 (20%)

Query: 62  NVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++ +      F   +    ++LL+D     +LP+++     ++LD G G G +   +   
Sbjct: 171 SLTVKSLPGVFSHGQFDVGSQLLLD-----TLPKLKG----KVLDFGCGAGVLGAVMASR 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +    DIS  A+  +++    NG++       SD +S     +  I+SNPP+   +
Sbjct: 222 HPDIELEMCDISAFAVASSQATLEANGLTGNVFA--SDVYSDTSKDYQFIISNPPFHSGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E                     T+     +HL + G   +
Sbjct: 280 DTSYSATE---------------------TLLAQAPKHLKRSGEMII 305


>gi|261342547|ref|ZP_05970405.1| ribosomal RNA small subunit methyltransferase D [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315189|gb|EFC54127.1| ribosomal RNA small subunit methyltransferase D [Enterobacter
           cancerogenus ATCC 35316]
          Length = 378

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P    V  D S  A+  ++ N  
Sbjct: 214 DIGARFFIEHLPENLEGEIVDLGCGNGVIGLTLLAKNPDASVVFSDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ +  NPP+        L   V            
Sbjct: 274 TNMPDALDRCEFMINNALSGVEPFRFNAVFCNPPF---HQKHALTDNV------------ 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L  +G   +
Sbjct: 319 ------AWEMFHHARRCLKINGELYI 338


>gi|255659095|ref|ZP_05404504.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida
           DSM 20544]
 gi|260848539|gb|EEX68546.1| putative N-6 adenine-specific DNA methylase [Mitsuokella multacida
           DSM 20544]
          Length = 252

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L    PR   R   R+L+LGTGTG + L +  E        V+IS    E+A  N  
Sbjct: 34  DAVLLAHFPRYRSRQ--RVLELGTGTGVIPLLIADEV--AHVEAVEISPVMAELAARNVH 89

Query: 143 TNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIE 176
            N + E+    + D+ +         FDV+++NPPY  
Sbjct: 90  MNELEEKIAVKEGDYRAIRSLYPAESFDVVLANPPYRP 127


>gi|163749078|ref|ZP_02156328.1| hypothetical protein KT99_19594 [Shewanella benthica KT99]
 gi|161331148|gb|EDQ02037.1| hypothetical protein KT99_19594 [Shewanella benthica KT99]
          Length = 349

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 31/132 (23%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +   R+LD G G G +  ALLKE P  +   VDI+  AL   +     N       T  
Sbjct: 202 PKMKGRVLDFGCGAGVITAALLKEQPKLQIECVDINAMALASCELTLTANNFIA--TTYP 259

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL----SHYRTIA 210
           SD     +  FD I+SNPP+                          DGL       +   
Sbjct: 260 SDGLDQTQDKFDGIISNPPF-------------------------HDGLKSTSEIAKKFV 294

Query: 211 DGVSRHLNKDGL 222
               + L + G+
Sbjct: 295 SDSMKKLRRGGV 306


>gi|319899144|ref|YP_004159237.1| ribosomal protein L11 methyltransferase [Bartonella clarridgeiae
           73]
 gi|319403108|emb|CBI76666.1| ribosomal protein L11 methyltransferase [Bartonella clarridgeiae
           73]
          Length = 289

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++  +    LDLGTG+G + + +    P    +  DI   A+++A+ N   NG
Sbjct: 139 LEMITKVMQNENPQNALDLGTGSGILAIGIAMLKPIA-VLAADIDPIAIQVAQHNISLNG 197

Query: 146 VSERFDTL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E    +     +D   S+   FD+IV+N   + + +++                    
Sbjct: 198 VTEHVTAVTVTGLNDDRISLCTPFDLIVAN--ILANPLIE-------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +++ L KDG   +  I   Q  DV++ +  + L  +  +
Sbjct: 236 -------LAKDMAQALRKDGSIILSGILEEQHNDVLKAYVKQGLKHIETY 278


>gi|315653420|ref|ZP_07906342.1| O-methyltransferase [Lactobacillus iners ATCC 55195]
 gi|315489345|gb|EFU78985.1| O-methyltransferase [Lactobacillus iners ATCC 55195]
          Length = 342

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL   A           D  +++DL  G GA  L +      
Sbjct: 17  HLKVIQRKDAFSFSLDTLLLAYFAKEKI------HDRDKVVDLCCGNGAATLYM-SYFNL 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +    A+ +   N +  R      +   +     +  FDV+  NPPY + 
Sbjct: 70  AHYDAVEIQPEIASQAERSVNLNQLENRIAVHCINALDAPKKLGKDKFDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +       +   +  I+L            +    S+ L   G   +  
Sbjct: 130 PEGHVINPNQQKAIARHEILINL----------EQVIIVASQLLKMKGKFFIVH 173


>gi|290476530|ref|YP_003469435.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004]
 gi|289175868|emb|CBJ82671.1| 16S RNA m2G1207 methylase [Xenorhabdus bovienii SS-2004]
          Length = 337

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 50/135 (37%), Gaps = 23/135 (17%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   +      +LD+  G G +   L K++P       D++  A   +K+    N +  
Sbjct: 188 LLSTFDGPVSGSLLDIACGAGVLAAVLGKKNPELTLTLSDVNAAATISSKATLKANKLEG 247

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               + S+ +S++E  FD I+SNPP+ + +              + +L    D       
Sbjct: 248 NV--ITSNVYSAIEEKFDWIISNPPFHDGL--------------KTNLAAADD------- 284

Query: 209 IADGVSRHLNKDGLC 223
           +      +L   G  
Sbjct: 285 LIRMAPNYLKSGGKL 299


>gi|327484811|gb|AEA79218.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           LMA3894-4]
          Length = 376

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 198 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++     +     +IV NPP+ +  
Sbjct: 253 PQAKITCVDESFMAIACAQKNLHDNLGKRDIHCIANNCLDGFLAHSSSMIVCNPPFHQQQ 312

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 313 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 349

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 350 LARLF---GKSHVRVI---ANNSKFVILQ 372


>gi|289578109|ref|YP_003476736.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           italicus Ab9]
 gi|289527822|gb|ADD02174.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           italicus Ab9]
          Length = 308

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +A  K     +    DI   ++E+A+ N   N +       +SD  + 
Sbjct: 177 VFDIGCGSGILSIASSKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLNE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +G  D+IV+N   I + ++  L  EV  +
Sbjct: 235 FDGKADIIVAN---IIADVIIKLSTEVPKY 261


>gi|145300101|ref|YP_001142942.1| ribosomal RNA small subunit methyltransferase D [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142852873|gb|ABO91194.1| putative ribosomal RNA small subunit methyltransferase D [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 385

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +      +++DLG G G + LALL + P  +   +D S  A+  A+ N  
Sbjct: 225 DIGARFMLDNLPVHSARKVIDLGCGNGVLGLALLAKDPEVEVTFIDESHMAVASARLNVE 284

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N      R   + ++    V  G  D I+ NPP+ +   +             I+    
Sbjct: 285 HNLPDALPRARFMVNNCLDDVAVGAADRILCNPPFHQLQAITD----------HIAW--- 331

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESR 242
                    +     R L + G   + +G         + R+F + 
Sbjct: 332 --------QMFSDAHRVLPQGGELWI-VGNRHLDYHNKLKRLFANA 368


>gi|254225847|ref|ZP_04919451.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621661|gb|EAZ49991.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 416

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PHAKITCVDESFMAIACAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|229513939|ref|ZP_04403401.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
 gi|229349120|gb|EEO14077.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           TMA 21]
          Length = 387

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 209 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 263

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 264 PQAKITCVDESFMAIACAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 323

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 324 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 360

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 361 LARLF---GKSHVRVI---ANNSKFVILQ 383


>gi|153217281|ref|ZP_01951042.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153828187|ref|ZP_01980854.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|124113692|gb|EAY32512.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|148876276|gb|EDL74411.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 416

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIACAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|90410918|ref|ZP_01218932.1| Hypothetical methyltransferase [Photobacterium profundum 3TCK]
 gi|90328131|gb|EAS44442.1| Hypothetical methyltransferase [Photobacterium profundum 3TCK]
          Length = 374

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 74/207 (35%), Gaps = 41/207 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           +++RL+  ++ F     +   +D      L  I +    + I+DLG G G + +   + +
Sbjct: 198 HDIRLSNHANVF-----SGESLDIGARLLLNHIPQDYKYKDIIDLGCGNGVIGIKAARRN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           P  K   VD S  A      NA  N    E+   + +D  + +E    D+++ NPP+ + 
Sbjct: 253 PQAKITCVDESFMAAASCTENAKQNLEAPEQLTAIVTDCLADIEHSSADLVLCNPPFHQQ 312

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVD 234
             +             I+             +     + L   G   V IG  Q      
Sbjct: 313 TTITD----------HIAW-----------QMFCDAKQVLRPKGELIV-IGNRQLGYDDK 350

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLL 261
           + R+F       V        ND+ ++
Sbjct: 351 LKRLFG-----NVEII---AQNDKFIV 369


>gi|50550363|ref|XP_502654.1| YALI0D10329p [Yarrowia lipolytica]
 gi|49648522|emb|CAG80842.1| YALI0D10329p [Yarrowia lipolytica]
          Length = 393

 Score = 70.5 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 61  YNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           Y +++ L      PR P     V+         +E + V   LD+GTGT  +   L  + 
Sbjct: 79  YGLKVELDPARLCPRVPIRVAYVEWIGELIPETLEPKTVTG-LDVGTGTSCIYPLLAAKI 137

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPPY 174
             +  +G DI  KA E A+ N   N   E+  T+     Q D+F      F   + NPP+
Sbjct: 138 YGWNMIGSDIDDKAAETAQKNIERNPEIEKLITVKHVSPQRDFFDFPNITF--TMCNPPF 195

Query: 175 IESVIVDCLGLEVRDFDPRISL---------DGGIDGLSHYRTIADGVSRH 216
             S       L  +   P   L          GG   L   + +     RH
Sbjct: 196 YASFEEMETSLSNKTSRPAGELKAAQTELITTGGE--LGFLQRMIGDSKRH 244


>gi|311086067|gb|ADP66149.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           LL01 (Acyrthosiphon pisum)]
          Length = 280

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N  + +   + S+ +S+V   FD+I+SNPP+   + ++                    
Sbjct: 184 NSNKFNGKI--VYSNLYSNVFKKFDLIISNPPFHNDLQIN-------------------- 221

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +    +  G  ++L K G    
Sbjct: 222 -FNIIEKMICGAKKYLTKTGELRF 244


>gi|219681691|ref|YP_002468077.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471384|ref|ZP_05635383.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           LSR1 (Acyrthosiphon pisum)]
 gi|219624534|gb|ACL30689.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086639|gb|ADP66720.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           TLW03 (Acyrthosiphon pisum)]
 gi|311087224|gb|ADP67304.1| 16S rRNA m(2)G 1207 methyltransferase [Buchnera aphidicola str.
           JF99 (Acyrthosiphon pisum)]
          Length = 280

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N  + +   + S+ +S+V   FD+I+SNPP+   + ++                    
Sbjct: 184 NSNKFNGKI--VYSNLYSNVFKKFDLIISNPPFHNDLQIN-------------------- 221

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +    +  G  ++L K G    
Sbjct: 222 -FNIIEKMICGAKKYLTKTGELRF 244


>gi|153829117|ref|ZP_01981784.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875375|gb|EDL73510.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 340

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    LT+ S           L    L  +LP +      +++D+G G G +   + K +
Sbjct: 167 YQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              +    DIS  A+  ++   V N +        SD FS     +D IV+NPP+   + 
Sbjct: 223 SHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYDYIVTNPPFHSGLE 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                      +      HL   G   V
Sbjct: 281 TSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|15616937|ref|NP_240150.1| hypothetical protein BU328 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|25403592|pir||D84968 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039002|dbj|BAB13036.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 280

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 124 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 183

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N  + +   + S+ +S+V   FD+I+SNPP+   + ++                    
Sbjct: 184 NSNKFNGKI--VYSNLYSNVFKKFDLIISNPPFHNDLQIN-------------------- 221

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +    +  G  ++L K G    
Sbjct: 222 -FNIIEKMICGAKKYLTKTGELRF 244


>gi|11387075|sp|P57413|RSMC_BUCAI RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 338

 Score = 70.5 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 23/144 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS           R   ++LD+G GTG +  +LL  SP      VD +  AL+ ++   
Sbjct: 182 IDSGSKLLASTFSNRITGKVLDIGCGTGFLSASLLYFSPDAILTLVDNNMYALKCSQYTL 241

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +N  + +   + S+ +S+V   FD+I+SNPP+   + ++                    
Sbjct: 242 NSNKFNGKI--VYSNLYSNVFKKFDLIISNPPFHNDLQIN-------------------- 279

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +    +  G  ++L K G    
Sbjct: 280 -FNIIEKMICGAKKYLTKTGELRF 302


>gi|309811280|ref|ZP_07705069.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
 gi|308434762|gb|EFP58605.1| methyltransferase small domain protein [Dermacoccus sp. Ellin185]
          Length = 221

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 64/160 (40%), Gaps = 12/160 (7%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPF 121
           V +T +   F P       +D+  A  L            LD+G G G +   L   SP 
Sbjct: 28  VSMTTAPGVFCPDR-----LDAGTAVLLNHAPTPPPSGTFLDVGCGWGPITTTLALRSPS 82

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  GVD++ +AL++   N    G S       S     V   FD+I SNPP    V   
Sbjct: 83  AQVWGVDVNRRALDLCADNVAAQGCSNVAVAQPSQVPDHV--RFDLIWSNPPI--RVGKK 138

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKD 220
            L   +  + PR+ + GG   L   R + +D + + L + 
Sbjct: 139 VLHELLLTWLPRL-VVGGHAYLVVQRNLGSDSLQKWLAEQ 177


>gi|195161412|ref|XP_002021562.1| GL26448 [Drosophila persimilis]
 gi|198472596|ref|XP_002133080.1| GA28866 [Drosophila pseudoobscura pseudoobscura]
 gi|194103362|gb|EDW25405.1| GL26448 [Drosophila persimilis]
 gi|198139083|gb|EDY70482.1| GA28866 [Drosophila pseudoobscura pseudoobscura]
          Length = 226

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 22/177 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F ++        +EP  ++ L +  AL   LP +        +++G+G+G +  AL K+
Sbjct: 5   HFDHLTSQDYEHVYEPAEDSFL-LLDALEADLPFLNGLQPRLCVEIGSGSGIIITALSKQ 63

Query: 119 SPFFKG-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIE 176
                  +  DI+ KA +  +  A  NG   R D++  +    +     DV++ NPPY+ 
Sbjct: 64  LANTSLCLATDINPKACDATRRTARHNG--GRVDSVNCNLADVLRKRLVDVLLFNPPYVV 121

Query: 177 SVIVDCLGLEVRDFDPRIS--------------LDGGIDGLSHYRTIADGVSRHLNK 219
           +   D L  ++  F P  +                GG DG     T+   +   L+ 
Sbjct: 122 TSD-DELQCQM--FGPGSAGESNLSTERNLVYSWAGGKDGRRVTDTLIQQLDDILSP 175


>gi|76787970|ref|YP_329526.1| hypothetical protein SAK_0904 [Streptococcus agalactiae A909]
 gi|77413600|ref|ZP_00789787.1| conserved hypothetical protein [Streptococcus agalactiae 515]
 gi|76563027|gb|ABA45611.1| conserved hypothetical protein [Streptococcus agalactiae A909]
 gi|77160366|gb|EAO71490.1| conserved hypothetical protein [Streptococcus agalactiae 515]
          Length = 254

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P++  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + +++  +  ++AK +   N + ++   +  D  + ++ +     D+++ NPPY ++
Sbjct: 70  ATIIEIELQERLADMAKRSIKLNKLEKQVTMINDDLKNLLDHVQRSNVDLMLCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L          R I       L   G  ++    ++ +
Sbjct: 130 SETSKKNLSPHYLLARHEITTNL----------REICQIAQHALKTKGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++       L
Sbjct: 180 EIIDTMRQFNL 190


>gi|239917617|ref|YP_002957175.1| 16S RNA G1207 methylase RsmC [Micrococcus luteus NCTC 2665]
 gi|239838824|gb|ACS30621.1| 16S RNA G1207 methylase RsmC [Micrococcus luteus NCTC 2665]
          Length = 401

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G + +   +  P    +  D S  A+    + A  N V++R   +
Sbjct: 254 DPRPPGRLVDLGCGNGLLSVGAARLWPHVTVLATDQSAVAVASTLATARANRVADRVRAV 313

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + D  ++  +G  + ++ NPP+ +   VD          P ++             +   
Sbjct: 314 RDDALATWPDGTEECVLLNPPFHDGNAVD----------PSVA-----------HRLVAA 352

Query: 213 VSRHLNKDGLCSV 225
            +R L   G    
Sbjct: 353 AARVLEPGGRLWC 365


>gi|15897648|ref|NP_342253.1| hypothetical protein SSO0748 [Sulfolobus solfataricus P2]
 gi|284174974|ref|ZP_06388943.1| hypothetical protein Ssol98_10001 [Sulfolobus solfataricus 98/2]
 gi|6015728|emb|CAB57555.1| hypothetical protein [Sulfolobus solfataricus P2]
 gi|13813915|gb|AAK41043.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261602417|gb|ACX92020.1| methylase [Sulfolobus solfataricus 98/2]
          Length = 207

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F  +RL L+  T+EP  +T++L        L  +      ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGIRLCLNDQTYEPSDDTDIL--------LSLLRVGKGDKVLDMGSGSGILGIWSLMM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K V VDI+  A    L   K N         +  L  D  S +    FDV + NP
Sbjct: 60  ---GGKVVFVDINPYATLSTLCSLKVN-NLYNTPNYYGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWI--------EYSWSGGNDGSKVLIDFLKTVKA 150


>gi|281602470|gb|ADA75454.1| hypothetical protein SFxv_3432 [Shigella flexneri 2002017]
          Length = 481

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 317 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 376

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 377 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 418

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 419 ---DNVAWEMFHYARRCLKINGELYI 441


>gi|110806967|ref|YP_690486.1| hypothetical protein SFV_3126 [Shigella flexneri 5 str. 8401]
 gi|110616515|gb|ABF05182.1| putative enzyme [Shigella flexneri 5 str. 8401]
          Length = 481

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 317 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 376

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 377 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 418

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 419 ---DNVAWEMFHYARRCLKINGELYI 441


>gi|24372535|ref|NP_716577.1| hypothetical protein SO_0948 [Shewanella oneidensis MR-1]
 gi|24346547|gb|AAN54022.1|AE015540_2 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 220

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 15/162 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                   +ILD+G G+G + L +  +    +   V++  KA      N V +  ++R  
Sbjct: 13  WSPLSQAQQILDIGAGSGLLSL-MAAQRSLGRITAVELEEKAAAACLYNMVQSPWADRLS 71

Query: 152 TLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +  D           G FD I+ NPPY E              D   ++    + L   
Sbjct: 72  VIHCDIQDFCQQTQYHGFFDHIICNPPYFEHGPQAN--------DSHRAMARHTNTLGFA 123

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             + D + + L   G  S+ +             S KL L  
Sbjct: 124 -PLLDAIIQCLTPQGYASLILPSQSMPRFKACLTSSKLHLTE 164


>gi|329667108|gb|AEB93056.1| hypothetical protein LJP_0728 [Lactobacillus johnsonii DPC 6026]
          Length = 340

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +T LL          + +  D  +++DL +G GA  + +      
Sbjct: 17  DLQIIQEKDAFSFSLDTLLL------GYFAQNKIHDNYKVVDLCSGNGAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V+I  +  + A+ +   N +  R +    +   +     +  +DV+V NPPY + 
Sbjct: 70  AHYDAVEIQKEIADQARRSIKLNKLENRIEVHCLNALDAPKKLGKDKYDVVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHIVNPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|229470501|sp|A4SQM2|RLMG_AERS4 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 377

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +      +++DLG G G + LALL + P  +   +D S  A+  A+ N  
Sbjct: 217 DIGARFMLDNLPVHSARKVIDLGCGNGVLGLALLAKDPEVEVTFIDESHMAVASARLNVE 276

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N      R   + ++    V  G  D I+ NPP+ +   +             I+    
Sbjct: 277 HNLPDALPRARFMVNNCLDDVAVGAADRILCNPPFHQLQAITD----------HIAW--- 323

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESR 242
                    +     R L + G   + +G         + R+F + 
Sbjct: 324 --------QMFSDAHRVLPQGGELWI-VGNRHLDYHNKLKRLFANA 360


>gi|223982933|ref|ZP_03633145.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM
           12042]
 gi|223965094|gb|EEF69394.1| hypothetical protein HOLDEFILI_00421 [Holdemania filiformis DSM
           12042]
          Length = 402

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 30/164 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD  + TG   L     +     V VD+S  AL+  ++NAV N + +R   +++D
Sbjct: 227 HGKRVLDCFSHTGGFALNAALGNAQS-VVAVDVSQTALDQGRANAVLNHLEDRIQFVKAD 285

Query: 157 WFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            F  ++    G +D+IV +PP                     +  G       Y+ I   
Sbjct: 286 VFEYLDRCAMGQYDIIVLDPPAFTKSRKTI----------HQAYAG-------YKRINYQ 328

Query: 213 VSRHLNKDGLCS-------VEIGYNQKVDVVRIFESRKLFLVNA 249
             + L   G          +EI  N +  +    +   + L   
Sbjct: 329 AMKLLQNGGYLITCSCSRFMEI-DNFEKMLREAAQEAGVTLKQV 371


>gi|41053969|ref|NP_956223.1| tRNA (uracil-5-)-methyltransferase homolog A [Danio rerio]
 gi|28279548|gb|AAH45367.1| Trm2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Danio
           rerio]
          Length = 619

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 11/126 (8%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDL 104
               + G    +     ++  +S  +F    +T       L  ++    +      +LD+
Sbjct: 405 PCEHVTGEEWIHEELLGLKFRISPHSFF---QTNTPAAEILYSAVGEWAQLDQDSTVLDV 461

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             GTG + ++L K     K +G+++  +A++ A++NA  NG++   +            +
Sbjct: 462 CCGTGTIGISLAKRVK--KVIGIELCQEAVKDAEANAKANGLT-NVEFHCGKAEDVFPTI 518

Query: 165 FDVIVS 170
            + +VS
Sbjct: 519 LNAVVS 524


>gi|122890880|emb|CAM13119.1| novel protein (zgc:55519) [Danio rerio]
          Length = 619

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 11/126 (8%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDL 104
               + G    +     ++  +S  +F    +T       L  ++    +      +LD+
Sbjct: 405 PCEHVTGEEWIHEELLGLKFRISPHSFF---QTNTPAAEILYSAVGEWAQLDQDSTVLDV 461

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             GTG + ++L K     K +G+++  +A++ A++NA  NG++   +            +
Sbjct: 462 CCGTGTIGISLAKRVK--KVIGIELCQEAVKDAEANAKANGLT-NVEFHCGKAEDVFPTI 518

Query: 165 FDVIVS 170
            + +VS
Sbjct: 519 LNAVVS 524


>gi|332998693|gb|EGK18289.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           VA-6]
 gi|332999849|gb|EGK19433.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-272]
 gi|333015719|gb|EGK35058.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-227]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|226327274|ref|ZP_03802792.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198]
 gi|225204492|gb|EEG86846.1| hypothetical protein PROPEN_01140 [Proteus penneri ATCC 35198]
          Length = 169

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 53/147 (36%), Gaps = 35/147 (23%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL--EIAKSN 140
           D      L   +   V  +LD+  G G +   L K++P  K    D++  A+   IA  N
Sbjct: 13  DEGSRLLLSTFDDAMVGDLLDMACGCGVLATVLGKKNPMLKLTLCDVNAAAISSSIATLN 72

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              N +  R   + S+ +S+VE  +D I+SNPP+                          
Sbjct: 73  V--NELEGRV--IASNVYSAVEETYDWIISNPPF-------------------------H 103

Query: 201 DGLS----HYRTIADGVSRHLNKDGLC 223
           DGL         I      +L K G  
Sbjct: 104 DGLGTSYTAAEDIIRLAPNYLKKGGKL 130


>gi|218531357|ref|YP_002422173.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
 gi|218523660|gb|ACK84245.1| methyltransferase small [Methylobacterium chloromethanicum CM4]
          Length = 250

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 69/208 (33%), Gaps = 22/208 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L      PR       D+ L   L  +       + DLG  TGAV LA+ +  
Sbjct: 8   FLGGRLRLRQP---PRGAHRAGTDAVLLARL--LAPAPGATLYDLGAATGAVGLAVARLC 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVS 170
              + V V+     + +A+ NA  NG+  R   +++D  +               D++++
Sbjct: 63  EVGRVVLVERDPDLVALARENAAANGLDARVAVIEADILAPGAQRRAAGMEPDSADIVLT 122

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP+ E          V       S   G  GL  +       +  L   G   +    +
Sbjct: 123 NPPFFEEG--AHRPSPVPQKASAHSFAAG--GLDLW---LRTCADLLRPGGRLGLIHRAD 175

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                +     R          +G  DR
Sbjct: 176 ALPACLDALRGR-FGDCAVRPVHGRADR 202


>gi|229528702|ref|ZP_04418092.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
 gi|229332476|gb|EEN97962.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           12129(1)]
          Length = 387

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 69/209 (33%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 209 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 263

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++     +     +IV NPP+ +  
Sbjct: 264 PQAKITCVDESFMAIACAQKNLHDNLGKRDIHCIANNCLDGFLAHSSSMIVCNPPFHQQQ 323

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 324 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 360

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 361 LARLF---GQSHVRVI---ANNSKFVILQ 383


>gi|229086883|ref|ZP_04219042.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-44]
 gi|228696393|gb|EEL49219.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-44]
          Length = 312

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPASPNEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEINVRLNKTDDVVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R + + GL      I   +K  +    E     +    K
Sbjct: 262 ARVVKQGGLFITSGIIAAKEKT-ISEALEKAGFTIEEVLK 300


>gi|169825664|ref|YP_001695822.1| hypothetical protein Bsph_0054 [Lysinibacillus sphaericus C3-41]
 gi|168990152|gb|ACA37692.1| Hypothetical yabB protein [Lysinibacillus sphaericus C3-41]
          Length = 249

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      I       I+DL +G 
Sbjct: 9   ERLDYLLAE----NLRIIQSPSVFSFS------LDAVLLSKFVNIPYHKG-NIVDLCSGN 57

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----L 164
           G + L L   +   +  GV++  + L++A+ +   N +  +   +  D     +      
Sbjct: 58  GVIPLFLSVRTKG-QITGVELQPRLLDMAERSIRYNQLENQIQMILGDVKEIPKQLGIEK 116

Query: 165 FDVIVSNPPYIESVIVDC----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +DV+  NPPY  +             +   +  ++L                 S+ L + 
Sbjct: 117 YDVVTCNPPYFLAHEASDKNLSEHHAIARHELYLTL----------EEAIQSASKLLKQG 166

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D+V    + +L
Sbjct: 167 GKAAFVHRPGRLLDIVTAMRANRL 190


>gi|297544382|ref|YP_003676684.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296842157|gb|ADH60673.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 308

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +A  K     +    DI   ++E+A+ N   N +       +SD  + 
Sbjct: 177 VFDIGCGSGILSIASGKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLNE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +G  D+IV+N   I + ++  L  EV  +
Sbjct: 235 FDGKADIIVAN---IIADVIIKLSTEVPKY 261


>gi|258516360|ref|YP_003192582.1| 50S ribosomal protein L11 methyltransferase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780065|gb|ACV63959.1| ribosomal protein L11 methyltransferase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 307

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 28/170 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +   L     R   R++D+GTG+G + +   K         VD    A+ +A  NA  
Sbjct: 153 TVMCMELLEEYLRPGDRVIDVGTGSGILAVTAAKLGAGS-VRAVDNDPVAVRVALENAEL 211

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NGV+++ + L+SD  + +               +   D L   +                
Sbjct: 212 NGVTDKVEVLESDLLAMLAQ------------GAAPADLLAANIIA-------------- 245

Query: 204 SHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
                +A   +R L   G   +  I  ++  DV          +    +D
Sbjct: 246 DVIIKLAADAARFLVPGGRFIASGIIKDRDKDVRTAINKAGFTVREIKRD 295


>gi|260857211|ref|YP_003231102.1| putative methyltransferase small domain [Escherichia coli O26:H11
           str. 11368]
 gi|257755860|dbj|BAI27362.1| predicted methyltransferase small domain [Escherichia coli O26:H11
           str. 11368]
 gi|323154541|gb|EFZ40741.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           EPECa14]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|313891792|ref|ZP_07825397.1| methyltransferase small domain protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119786|gb|EFR42973.1| methyltransferase small domain protein [Dialister microaerophilus
           UPII 345-E]
          Length = 246

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I+ +D  +I DLGTGTG + L LL           +I+    +IAK N 
Sbjct: 33  IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPVMADIAKRNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEV---RDFDPRI 194
             N  ++    L+ D+    E    G F  +V+NPPY +         E      ++   
Sbjct: 90  SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPYRDIKTGKISNKEAVATACYEIN- 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    +    +       L   G  ++  
Sbjct: 149 ---------ATIEDVFKTAQYLLKYGGRLTMVH 172


>gi|320174522|gb|EFW49658.1| putative enzyme [Shigella dysenteriae CDC 74-1112]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVAFSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|224539919|ref|ZP_03680458.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518473|gb|EEF87578.1| hypothetical protein BACCELL_04830 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 235

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 61/156 (39%), Gaps = 12/156 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             E     +ILD+GTGTG + + L +     +   ++I   A   AK N   +   +R  
Sbjct: 32  WAEAESSQKILDIGTGTGLIAIMLAQRYSLSQITAIEIDEAAAAQAKMNVARSPWIKRIQ 91

Query: 152 TLQSDW-FSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            + +D+     E  +++IVSNPPY + ++        +      ++          Y  +
Sbjct: 92  VICNDFSLFQTESKYNLIVSNPPYFVNALNCPDKQRNMARHTCELN----------YELL 141

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
               +  L K G   V I    +  V+      KL+
Sbjct: 142 FRRSAHLLEKQGRVCVIIPTEAEKLVIDTAWKYKLY 177


>gi|313839310|gb|EFS77024.1| methyltransferase small domain protein [Propionibacterium acnes
           HL086PA1]
          Length = 362

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 22/124 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +DLG G G +   L +  P       D+S +A++     A  N +               
Sbjct: 225 VDLGCGNGVISAHLARLLPQATIHATDVSWQAIDSTHLTAQANQLDI-VTHWCDGLVDIP 283

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
               DV+V+NPP+             +D  P ++             +    +R L   G
Sbjct: 284 NESVDVVVTNPPFHRGT--------AQDHAPTLA-------------MLADATRVLRPGG 322

Query: 222 LCSV 225
               
Sbjct: 323 TLWC 326


>gi|260829457|ref|XP_002609678.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae]
 gi|229295040|gb|EEN65688.1| hypothetical protein BRAFLDRAFT_123579 [Branchiostoma floridae]
          Length = 1095

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 18/158 (11%)

Query: 101  ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            I+D   G G   +         + + +DI    LE A+ NA   GV++R + LQ D+   
Sbjct: 941  IIDAFCGVGGNAIQFA--FTCERVIAIDIDPVKLECARHNAAIYGVADRIEFLQGDYLHL 998

Query: 161  VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-------IADG 212
             EG   DV+  +PP+      D L  +V D    I      DG   +         IA  
Sbjct: 999  AEGLKADVVFLSPPW---GGPDYLTADVFDIKTMIV----PDGYEIFEKTKQITDNIAYF 1051

Query: 213  VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            V R+ + + L S+  G   KV+V + F +RKL  V A+
Sbjct: 1052 VPRNADVEQLVSL-AGPGGKVEVEQNFLNRKLKTVTAY 1088


>gi|156975545|ref|YP_001446452.1| 16S RNA G1207 methylase RsmC [Vibrio harveyi ATCC BAA-1116]
 gi|238686803|sp|A7N1U8|RLMG_VIBHB RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|156527139|gb|ABU72225.1| hypothetical protein VIBHAR_03277 [Vibrio harveyi ATCC BAA-1116]
          Length = 385

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
            ++L    + +     +   +D    F L  + +   ++ ++DLG G G + + + + +P
Sbjct: 199 GIQLKNLPNVY-----SGESLDLGARFMLQHLPQDPTLKHVIDLGCGNGLLSVKMGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             +   VD S  A+E AK N + N    R    + ++          D+++ NPP+ +  
Sbjct: 254 QARLTSVDESFMAVESAKQNLLDNLGDARDIQCIANNCLDGFTPDCADMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + LN+ G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQILNQGGKLLVIGNRHLGYD--AK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + LV
Sbjct: 351 LKRLFGDKNVKLV 363


>gi|254171789|ref|ZP_04878465.1| methyltransferase [Thermococcus sp. AM4]
 gi|214033685|gb|EEB74511.1| methyltransferase [Thermococcus sp. AM4]
          Length = 210

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 4/110 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V S L +            + DLGTGTG + +   K     K   V+I  KALE+A+ NA
Sbjct: 32  VASELLWLAHSAGDIAGKVVADLGTGTGVLAIG-AKLLGAEKVYAVEIDEKALEVARRNA 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              GV    + + +D  S      D ++ NPP+            ++ F+
Sbjct: 91  ERAGVD--VEFINADV-SEFNERVDTVIMNPPFGSQRRHADRPFLLKAFE 137


>gi|113969274|ref|YP_733067.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. MR-4]
 gi|123130689|sp|Q0HLQ7|RLMG_SHESM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|113883958|gb|ABI38010.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. MR-4]
          Length = 377

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + + D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLDNLPQGDFKTIVDLGCGNGVLGLRAAQLYPNANIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +E+      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 NNQLPAEKGHFHWDDCMTHLPDGVEPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKNGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|329769791|ref|ZP_08261192.1| hypothetical protein HMPREF0433_00956 [Gemella sanguinis M325]
 gi|328838153|gb|EGF87771.1| hypothetical protein HMPREF0433_00956 [Gemella sanguinis M325]
          Length = 244

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 19/182 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      +       I++L +G G + + +L+E    +   ++I    +E+ K +  
Sbjct: 28  DSFLLPYFSNVPLSPKKNIIELCSGNGGISI-ILRERSGAQISMLEIQEDLVELTKKSLE 86

Query: 143 TNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCL----GLEVRDFDPRI 194
            N +++  D    D            +D ++ NPPY     +          +   +   
Sbjct: 87  LNDIADNIDVKCGDIKEVKNYYKPSSYDYVICNPPYFPVENMPNQREKNNHNISRHEILC 146

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
           +L          ++I       L ++G  S+     +  D++   E   L +      Y 
Sbjct: 147 NL------SDVIKSI----KYLLKQNGKFSLVHRTYRISDIISESEKNGLAIKRIRFVYS 196

Query: 255 GN 256
             
Sbjct: 197 NK 198


>gi|294155449|ref|YP_003559833.1| adenine-specific DNA modification methyltransferase [Mycoplasma
           crocodyli MP145]
 gi|291599891|gb|ADE19387.1| adenine-specific DNA modification methyltransferase [Mycoplasma
           crocodyli MP145]
          Length = 257

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 27/195 (13%)

Query: 65  LTLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           L   SD +  + +T     VD+ L  +   +  + +  +L++GT  GA+ + +   +   
Sbjct: 10  LGFDSDLYVFQDKTMFNYSVDTILLGNFVFL-NKSIKNMLEIGTNNGALSIFIASRNKNL 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSER--------FDTLQSDWFSSVEGLFDVIVSNPPY 174
           K   V+I  KA E+AK N   N + E+         D  ++    + +  +  IV NPP+
Sbjct: 69  KIEAVEIQKKAGELAKLNIEHNNMHEQINVSIINFIDFWKNHVKEN-KKKYQSIVCNPPF 127

Query: 175 IE---SVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
                + I   +  E  +   +  ++L            + +G S+ + + G  ++ +  
Sbjct: 128 YPFDKTKIKKNISQEKLIATHEIHMNL----------EQLIEGCSKIIEQKGYLTLVLPV 177

Query: 230 NQKVDVVRIFESRKL 244
            + VD   +    K 
Sbjct: 178 ERMVDCFELMRKYKF 192


>gi|269120318|ref|YP_003308495.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268614196|gb|ACZ08564.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 228

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 20/165 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R V +ILD+GTG   + L LL +    +  G++I   + E+A  N   N +S+R   ++
Sbjct: 40  NRHVKKILDIGTGNAILPL-LLSQKSKAEITGIEILKISAELAVKNIELNNLSDRIKIIE 98

Query: 155 SDWFSSVE----GLFDVIVSNPPYI-----ESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            D     +      FD I++NPP+      +  I D   L V   +  I L         
Sbjct: 99  GDIRKWADYFRPAEFDQIITNPPFFKYDGNDDQINDLEQLSVARHEYNIKL--------- 149

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
              I    S  L      ++     +  +++ +     L      
Sbjct: 150 -EEIIQISSVLLKNRAYFTMVHRSERLAEILELLVKYGLEPKRIR 193


>gi|170054516|ref|XP_001863164.1| ybiN [Culex quinquefasciatus]
 gi|167874770|gb|EDS38153.1| ybiN [Culex quinquefasciatus]
          Length = 456

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 85/243 (34%), Gaps = 41/243 (16%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVV 99
             E++  +      RDF  + + L +    P    R    L ++     +L     R  V
Sbjct: 47  NREALQLLTRVLLRRDF-GLEVDLPAGKLVPTLPLRLNYVLWLEDV-EEALGWRRNRAEV 104

Query: 100 RILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R LD+G G   +   L + +    +K VG++    ++E A+ N   NG++     ++   
Sbjct: 105 RGLDIGCGASCIYPLLGVARNRTRWKMVGLEKVRDSVESARGNVERNGLTGDVRVVEQKE 164

Query: 158 FSS-----------VEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGID---- 201
                         V   FD  + NPP Y +   V+         +P     G +D    
Sbjct: 165 GEETVIRGFLDEDGVGERFDFCMCNPPFYEQDHEVENRTG--HRPEPSAVSTGSMDELRT 222

Query: 202 -G--LSHYRTIADGVSRHLNKDGLCS---VEI--GYNQKVDVVRIFESRKLFLVNAFKDY 253
            G  L     I D     L +        +     Y+Q   ++RI + R +      + +
Sbjct: 223 EGGELRFVEKIIDESLE-LKERITVYSSMLGHKRNYDQ---ILRILKGRGVSNFTTTRFF 278

Query: 254 GGN 256
            GN
Sbjct: 279 QGN 281


>gi|159463754|ref|XP_001690107.1| N6-DNA-methyltransferase [Chlamydomonas reinhardtii]
 gi|158284095|gb|EDP09845.1| N6-DNA-methyltransferase [Chlamydomonas reinhardtii]
          Length = 223

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 57/151 (37%), Gaps = 15/151 (9%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF------ 121
           +S+ +EP  +T LLVD    ++      +     L+LG G+G V  +L            
Sbjct: 15  NSNVYEPSDDTFLLVDVLQEYARKWESNKPRC-CLELGCGSGFVITSLALLLRQLSLPVR 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            + + +D S  A E       ++    V     +L       ++G  DV++ NPPY+ + 
Sbjct: 74  AQLLAIDHSPAAAEATAQTLHSHQVGDVEVVIASLFGPLLDRLQGCVDVLLFNPPYVPTP 133

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                  EV       +  GG  G      +
Sbjct: 134 D-----EEVEGRGIASAWAGGWKGRRVIDRV 159


>gi|229470430|sp|A8H786|RLMG_SHEPA RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 413

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  A+ N  
Sbjct: 218 DIGARIMLDNMPKGDYKSIVDLGCGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWA 277

Query: 143 TNGVSE------RFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  +++   F  D+++ NPP+ +   +             I
Sbjct: 278 LNKLDNPALVGEQATFGWDDCLTNMSEGFRPDLVLCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLDAFRRLKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|157962924|ref|YP_001502958.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
 gi|157847924|gb|ABV88423.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
          Length = 424

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+  A+ N  
Sbjct: 229 DIGARIMLDNMPKGDYKSIVDLGCGNGILGLHAKQVFPEAYIHFIDDSEMAVASARENWA 288

Query: 143 TNGVSE------RFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  +++   F  D+++ NPP+ +   +             I
Sbjct: 289 LNKLDNPALVGEQATFGWDDCLTNMSEGFRPDLVLCNPPFHQGEAITD----------HI 338

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 339 AW-----------QMFLDAFRRLKNGGILHV-VGNRHLAYHVKLQRIFKNC 377


>gi|296104818|ref|YP_003614964.1| putative ribosomal RNA large subunit methyltransferase G
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295059277|gb|ADF64015.1| putative ribosomal RNA large subunit methyltransferase G
           [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P    V  D S  A+  ++ N  
Sbjct: 214 DIGARFFIEHLPENLEGEIVDLGCGNGVIGLTLLAKNPQASVVFSDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ +  NPP+        L   V            
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVFCNPPF---HQKHALTDNV------------ 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L  +G   +
Sbjct: 319 ------AWEMFHHARRCLKINGELYI 338


>gi|256752133|ref|ZP_05492999.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748947|gb|EEU61985.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 308

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 31/124 (25%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +   K     +    DI   ++E+A+ N   N +       +SD  S 
Sbjct: 177 VFDVGCGSGILSITSSKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLSE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  D+IV+N                      I+             ++    ++L ++
Sbjct: 235 FRGKADIIVAN---------------------IIA--------DVIIRLSAEAPKYLKEE 265

Query: 221 GLCS 224
           GL  
Sbjct: 266 GLFL 269


>gi|91794287|ref|YP_563938.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans
           OS217]
 gi|122968522|sp|Q12K11|RLMG_SHEDO RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|91716289|gb|ABE56215.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella denitrificans
           OS217]
          Length = 383

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 59/163 (36%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   +   ++DLG G G + L      P  K   +D S  A+  +++N  
Sbjct: 223 DIGARIMLENMPNGEFNTVVDLGCGNGILGLRAAGLYPKAKIHFIDDSEMAVASSQANWA 282

Query: 143 TNGVS-ERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N ++ ER +    D  S ++     D+++ NPP+ +   +             I+    
Sbjct: 283 LNTLAPERAEFHWDDCMSHLDETVQPDLVLCNPPFHQGEAITD----------HIAW--- 329

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
                    + +     L   G+  + +G       V + R+F
Sbjct: 330 --------QMFNDAKHRLRSGGILHI-VGNRHLNYHVKLKRLF 363


>gi|74313522|ref|YP_311941.1| hypothetical protein SSON_3121 [Shigella sonnei Ss046]
 gi|82545340|ref|YP_409287.1| enzyme [Shigella boydii Sb227]
 gi|194431730|ref|ZP_03064021.1| methyltransferase family protein [Shigella dysenteriae 1012]
 gi|260869835|ref|YP_003236237.1| putative methyltransferase small domain [Escherichia coli O111:H-
           str. 11128]
 gi|123558746|sp|Q31WU9|RLMG_SHIBS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|123616196|sp|Q3YXQ6|RLMG_SHISS RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|73856999|gb|AAZ89706.1| putative enzyme [Shigella sonnei Ss046]
 gi|81246751|gb|ABB67459.1| putative enzyme [Shigella boydii Sb227]
 gi|194420086|gb|EDX36164.1| methyltransferase family protein [Shigella dysenteriae 1012]
 gi|257766191|dbj|BAI37686.1| predicted methyltransferase small domain [Escherichia coli O111:H-
           str. 11128]
 gi|320177708|gb|EFW52697.1| putative enzyme [Shigella boydii ATCC 9905]
 gi|320184634|gb|EFW59431.1| putative enzyme [Shigella flexneri CDC 796-83]
 gi|323165037|gb|EFZ50827.1| ribosomal RNA large subunit methyltransferase G [Shigella sonnei
           53G]
 gi|323173668|gb|EFZ59297.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           LT-68]
 gi|323178790|gb|EFZ64366.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           1180]
 gi|332086559|gb|EGI91704.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii
           5216-82]
 gi|332086617|gb|EGI91759.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 155-74]
 gi|332086761|gb|EGI91899.1| ribosomal RNA large subunit methyltransferase G [Shigella
           dysenteriae 155-74]
 gi|332092185|gb|EGI97263.1| ribosomal RNA large subunit methyltransferase G [Shigella boydii
           3594-74]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|229470425|sp|Q0T0I4|RLMG_SHIF8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|332753146|gb|EGJ83530.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           4343-70]
 gi|333000107|gb|EGK19690.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-218]
          Length = 378

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHYARRCLKINGELYI 338


>gi|152976742|ref|YP_001376259.1| ribosomal protein L11 methyltransferase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|189037690|sp|A7GT06|PRMA_BACCN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|152025494|gb|ABS23264.1| ribosomal protein L11 methyltransferase [Bacillus cytotoxicus NVH
           391-98]
          Length = 312

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ +Y+        T+      + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVKPGDTVIDVGTGSGVLSIAAAK-LGAASVQAYDLDPVAVESAEMNVRLNKTDDVVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
           Q+     +EG  D+IV+N
Sbjct: 231 QNSLLEGIEGPVDLIVAN 248


>gi|154322403|ref|XP_001560516.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10]
 gi|150847878|gb|EDN23071.1| hypothetical protein BC1G_00544 [Botryotinia fuckeliana B05.10]
          Length = 230

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 35/164 (21%)

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGV------SERFDT-----LQSDWFSSVEGLFDVIV 169
             + VG+DIS KAL+++  N   N +      S RF+       +       +G+ DVIV
Sbjct: 27  QLEIVGLDISKKALDLSIQNVRFNDLKRSAQQSVRFEFSDVLGDEEKILDKFQGVCDVIV 86

Query: 170 SNPPYIESVIV-DCLGLEVRDFDPRISL--------------DGGIDGLS-----HYRTI 209
           SNPPYI            VR+++P+++L              D G   L       Y  +
Sbjct: 87  SNPPYISEDGFNKETTRSVRNWEPKLALVPNASRRETIHFNGDSGNSPLIKVEDVFYYRL 146

Query: 210 ADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFESRKLFLVNAFKD 252
                  L K  +  +E+G   Q   V ++        +  ++D
Sbjct: 147 LRF--YFLLKSKILVMEVGDEAQAKRVAQMAIGSS-DRIEIWRD 187


>gi|73662488|ref|YP_301269.1| ribosomal protein L11 methyltransferase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|82581520|sp|Q49Y20|PRMA_STAS1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|72495003|dbj|BAE18324.1| putative ribosomal protein L11 methylase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 312

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 71/221 (32%), Gaps = 58/221 (26%)

Query: 57  WRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK-------------- 95
           W+ +++         +  S +T++   ++EL ++     +    +               
Sbjct: 112 WKHYFHPFRASEKFTIVPSWETYQQEDDSELCIELDPGMAFGTGDHPTTSMCLKAIEAYV 171

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A        +   +D+   A+ +AK N   N      + +  
Sbjct: 172 KSSDSVIDVGTGSGILSIA-AHLLGVKRIKALDVDEMAVRVAKENFQKNNCEYAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +        FDV+++N               +                     + D    
Sbjct: 231 NLLKEETEKFDVVIAN---------------ILAH--------------IIEEMIDDAYN 261

Query: 216 HLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            LNKDG       +E    +   +V   +     +V+   D
Sbjct: 262 TLNKDGYFITSGIIE---EKHEAIVEHMKRSGFEIVSINHD 299


>gi|126652833|ref|ZP_01724978.1| ribosomal protein L11 methyltransferase [Bacillus sp. B14905]
 gi|126590369|gb|EAZ84489.1| ribosomal protein L11 methyltransferase [Bacillus sp. B14905]
          Length = 313

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFS------------LPRIEK 95
             W+ +Y+      R T+      + P    EL+++     +            L  +EK
Sbjct: 112 TAWKQYYHPVKISERFTIVPTWEQYTPVSTDELIIELDPGMAFGTGTHPTTVMCLQGLEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++   ++D+GTG+G + +             +D+   A+  A+ N   N V ++    
Sbjct: 172 VIKEGDTVVDIGTGSGVLSIGAALLGAK-NVHALDLDEVAVRSAQENVALNKVEDKVAVF 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
             +   +V+   DV+V+N
Sbjct: 231 HGNLLDTVKEPADVVVAN 248


>gi|157960426|ref|YP_001500460.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
 gi|226712997|sp|A8H038|RSMC_SHEPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|157845426|gb|ABV85925.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella pealeana ATCC
           700345]
          Length = 341

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 46/133 (34%), Gaps = 31/133 (23%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +    +LD G G G +  ALLK  P  K   VDI+  AL   +     NG + +     
Sbjct: 199 PKMSGNVLDFGCGAGVITAALLKAQPDLKLECVDINAMALASCELTLEANGFTAKVFA-- 256

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS----HYRTIA 210
           SD  +     +D I+SNPP+                          DGL+          
Sbjct: 257 SDGLAQTSQRYDGIISNPPF-------------------------HDGLASTTNIATNFV 291

Query: 211 DGVSRHLNKDGLC 223
              + +L   GL 
Sbjct: 292 KDSANNLKAGGLF 304


>gi|312218343|emb|CBX98289.1| similar to N(5)-glutamine methyltransferase MTQ2 [Leptosphaeria
           maculans]
          Length = 255

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 37/205 (18%)

Query: 70  DTFEPRPETELLVDSA--------LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP- 120
             +EP  ++ LL+D+         L              +L++G G+G V   +   +  
Sbjct: 14  RVYEPAEDSYLLLDTFSSEIESKFLKERFSHASSPTPPLVLEVGVGSGVVLAFIAANACS 73

Query: 121 -----FFKGVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSV-EGLFDVI 168
                    +G DI+  A + A            +G +   D +  D  +++     DV 
Sbjct: 74  ILGRLDVLTLGTDINSFACKAASQTIRSAVQERKDGRTVFLDIVNGDLATAIRPHSVDVF 133

Query: 169 VSNPPYIESVIVDCLGLEVRD----------FDPRISL-----DGGIDGLSHYRTIADGV 213
           + NPPY+ + + D    +  +          F+    L      GG DG+     +   +
Sbjct: 134 IFNPPYVPAELPDMSRHKDYNSLADGTLKTSFEQDSYLLELSYAGGEDGMLVTDRMLKQI 193

Query: 214 SRHLNKD-GLCSVEIGYNQKVDVVR 237
              L++  G+  + +    K +VV+
Sbjct: 194 PGILSESRGVAYLLLCAQNKPEVVK 218


>gi|304411144|ref|ZP_07392759.1| methyltransferase small [Shewanella baltica OS183]
 gi|307306439|ref|ZP_07586182.1| methyltransferase small [Shewanella baltica BA175]
 gi|304350337|gb|EFM14740.1| methyltransferase small [Shewanella baltica OS183]
 gi|306910730|gb|EFN41158.1| methyltransferase small [Shewanella baltica BA175]
          Length = 347

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|302557047|ref|ZP_07309389.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
 gi|302474665|gb|EFL37758.1| protein-(glutamine-N5) methyltransferase, release factor-specific
           [Streptomyces griseoflavus Tu4000]
          Length = 286

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 6/67 (8%)

Query: 41  AIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR 100
            + R      +  ++GW +F+  R+T+    F PR  TE LV+ ALA             
Sbjct: 58  MVERRAAGLPLELVVGWAEFHGRRITVEPGVFVPRRRTEFLVEQALARV------PGATL 111

Query: 101 ILDLGTG 107
           ++DL  G
Sbjct: 112 LVDLCCG 118


>gi|242089147|ref|XP_002440406.1| hypothetical protein SORBIDRAFT_09g000490 [Sorghum bicolor]
 gi|241945691|gb|EES18836.1| hypothetical protein SORBIDRAFT_09g000490 [Sorghum bicolor]
          Length = 1094

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            + G++    + +      F P   +    +            +    + +LG G G + 
Sbjct: 82  HVQGFQQRKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDSIFRDK---TVAELGCGNGWIS 138

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDW 157
           +AL ++    K  G+DI+ +A++IA  N   N +                +R +  +SD 
Sbjct: 139 IALAEKWCPSKVYGLDINPRAVKIAWINLYLNALDDDGLPIYDGEGKTLLDRVEFYESDL 198

Query: 158 FS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRI-------SLDGGID---G 202
            S     +   D IV   P I +   + +   V +   +  +       +L G ++   G
Sbjct: 199 LSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFLYSLSNYCALQGFVEDQFG 258

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           L       +     +   G+    +G    Q V   R+F  R   +   ++
Sbjct: 259 LGLIARAVEEGISVIKPSGIMVFNMGGRPGQGV-CERLFRRRGFRITKLWQ 308


>gi|152999345|ref|YP_001365026.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
 gi|217972021|ref|YP_002356772.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
 gi|226712989|sp|A6WJH4|RSMC_SHEB8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|151363963|gb|ABS06963.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS185]
 gi|217497156|gb|ACK45349.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS223]
          Length = 347

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|160873960|ref|YP_001553276.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
 gi|226712990|sp|A9L1V0|RSMC_SHEB9 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|160859482|gb|ABX48016.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS195]
 gi|315266194|gb|ADT93047.1| methyltransferase small [Shewanella baltica OS678]
          Length = 347

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|126175727|ref|YP_001051876.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella baltica OS155]
 gi|226712988|sp|A3D8E4|RSMC_SHEB5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|125998932|gb|ABN63007.1| 16S rRNA m(2)G 1207 methyltransferase [Shewanella baltica OS155]
          Length = 347

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G +  ALLK  P      VDI+  AL   +     NG++ +     SD  +
Sbjct: 209 RVLDFGCGAGVIAAALLKAQPSLSLECVDINAMALASCELTLAANGMTAKV--YPSDGLA 266

Query: 160 SVEGLFDVIVSNPPYIE 176
              G F+ I+SNPP+ +
Sbjct: 267 QTTGKFNGIISNPPFHD 283


>gi|260583903|ref|ZP_05851651.1| 50S ribosomal protein L11 methyltransferase [Granulicatella elegans
           ATCC 700633]
 gi|260158529|gb|EEW93597.1| 50S ribosomal protein L11 methyltransferase [Granulicatella elegans
           ATCC 700633]
          Length = 314

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 79/212 (37%), Gaps = 52/212 (24%)

Query: 57  WRDFY-----NVRLTLSSDTFEPR--PETELLV--DSALAF----------SLPRIEK-- 95
           W+ +Y        LT+     E +   E ELL+  D  LAF          SL  +E+  
Sbjct: 114 WKKYYFPVRVTRYLTVVPSWLEYQKQQEDELLIRLDPGLAFGTGTHPTTQLSLAALEQYV 173

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          DI   A  ++K N   N         ++
Sbjct: 174 RGGESVLDVGTGSGVLSIA-AKLLGASTVTAFDIDEMATRVSKENISLNPEVGEIAVYEN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   D IV+N   I + I+  + ++                             
Sbjct: 233 NLLQGIQQPSDFIVAN---ILAEILLMMPVD--------------------------AYH 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           +LN++G+  +  I  ++  +V   +E+    L
Sbjct: 264 NLNENGVLILSGIIQSKAEEVRSAYENAGFTL 295


>gi|315498624|ref|YP_004087428.1| methyltransferase small [Asticcacaulis excentricus CB 48]
 gi|315416636|gb|ADU13277.1| methyltransferase small [Asticcacaulis excentricus CB 48]
          Length = 244

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 12/175 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FD 151
             +  V  L+LG G G V L+L+   P    VG++       + + N    G   R    
Sbjct: 39  RAKRAVSALELGCGVGGVILSLVARCPLVHVVGIERDEATFAVTQINLAQAGGDHRAILG 98

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            + + + S     FD+++SNPPY +         E++    R +     DGL  +   A 
Sbjct: 99  DIGAGYRSFDLARFDLVLSNPPYFDDPETLRAPHELK----RPAWIA-DDGLQAWLDFAQ 153

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN--DRVLLFCR 264
                    G        ++  D++        F++   + + G    RVL+  +
Sbjct: 154 AAV---VDGGEIMFIHRADRLGDILSGLPKCGSFVIRPIQAFAGEAAKRVLVRAK 205


>gi|269121536|ref|YP_003309713.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
 gi|268615414|gb|ACZ09782.1| methyltransferase small [Sebaldella termitidis ATCC 33386]
          Length = 222

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 21/170 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             ++ ++++ F+   +  LL D        R   +    +LD+G G G + L LL  +  
Sbjct: 16  GQKIIVNNNLFKITNDPLLLAD------FCRENIKKSGTLLDIGAGNGILPL-LLCNANL 68

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
            +   V+I   + +  + N   N +S++     +D         FD I+SNPPY      
Sbjct: 69  TEISAVEIQKNSFDCLEKNIDLNSLSDKIIPYHTDINDFFPDFEFDYIISNPPYYRENSG 128

Query: 181 DCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                E   +  F+ +++LD           +   + R L   G   + I
Sbjct: 129 SLSQSEEISIAKFEIKMTLD----------NLILNIKRLLKNHGTFYIII 168


>gi|323490054|ref|ZP_08095275.1| ribosomal protein L11 methyltransferase [Planococcus donghaensis
           MPA1U2]
 gi|323396350|gb|EGA89175.1| ribosomal protein L11 methyltransferase [Planococcus donghaensis
           MPA1U2]
          Length = 313

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-----RLTLSS--DTFEPRPETELLVDSALAFS------------LPRIEK 95
             W+ +Y+      R T+    +T+ P    EL+++     +            L  +EK
Sbjct: 112 TAWKKYYHPVKISKRFTIVPTWETYNPVSSDELIIELDPGMAFGTGTHPTTVMSLQALEK 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   R++D+GTG+G + +     S   +   +D+   A+  A  N   N V       
Sbjct: 172 MVKPNDRVIDIGTGSGVLAIGAALLSAK-EVYALDLDEVAVRSANINVKLNKVQHVVTVE 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
           + +    ++   DV+V+N
Sbjct: 231 EGNLTDKIDQPGDVVVAN 248


>gi|315179302|gb|ADT86216.1| hypothetical ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score = 70.1 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L    + +     +   +D    F LP +     +  ++DLG G G + + + + +P
Sbjct: 199 SIELNNLPNVY-----SGESLDQGTRFLLPHLPSDSTLNHVIDLGCGNGVLSVRMGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
                 VD S  A+E A+ N VTN G     + + ++     E    D++V NPP+ +  
Sbjct: 254 QVNITCVDESFMAVESARQNLVTNLGQERNIECIANNCLDGFEAAHTDMVVCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 314 AITD----------HIAW-----------QMFCDSKHVLRKGGKLLVIGNRHLGYD--VK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F   ++  V
Sbjct: 351 LTRLFGRSQVKTV 363


>gi|325967647|ref|YP_004243839.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
 gi|323706850|gb|ADY00337.1| methyltransferase [Vulcanisaeta moutnovskia 768-28]
          Length = 214

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDLG GTG   +A        + + +DI  +AL IA+ +A   G+S   D + +D 
Sbjct: 57  NARVLDLGCGTGRFAIAAALMG-VRQVICIDIDPEALAIARESASKYGLS-NVDFITNDI 114

Query: 158 FS-SVEGLFDVIVSNPPY 174
            + ++ G FDV+  NPP+
Sbjct: 115 RNMAIMGRFDVVFQNPPF 132


>gi|320450558|ref|YP_004202654.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01]
 gi|320150727|gb|ADW22105.1| ribosomal protein L11 methyltransferase [Thermus scotoductus SA-01]
          Length = 254

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 63/175 (36%), Gaps = 42/175 (24%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L  SALA  L     R   R+LDLGTG+G + +A  K       +GVDI    L  
Sbjct: 105 ETTRLALSALARHL-----RPGERVLDLGTGSGILAIAAAKLGGKA--LGVDIDETVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A+ NA  NGV  RF  L      ++  G F+++V+N                        
Sbjct: 158 AEENARRNGVGVRF--LPGSLEEALPYGPFNLMVAN------------------------ 191

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVN 248
           L         +R +A    R L   G   +  G    +   V          L+ 
Sbjct: 192 LFA-----ELHRELAPLYPRALAPGGRLLL-TGILAEKASLVKEAMAREGFSLLE 240


>gi|90415214|ref|ZP_01223148.1| RsmC protein [marine gamma proteobacterium HTCC2207]
 gi|90332537|gb|EAS47707.1| RsmC protein [marine gamma proteobacterium HTCC2207]
          Length = 353

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 70/249 (28%), Gaps = 53/249 (21%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH---RILGWRDFYNVRLTLSSDTFE 73
           LS      D    LDD+    L        +H  +     I GW         +      
Sbjct: 145 LSRLTKYSDDGKRLDDKNYLALRTIGS--PEHLPLQSKPGIFGWN-------KIDQG--- 192

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
               + LL+     F     E      +LDLG G G +  A  ++    K    D +  A
Sbjct: 193 ----SALLIHQLPQFIQSFGEANRPQSLLDLGCGYGFLSCAAAQQG-LTKITATDNNAAA 247

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L+  K N     V      L  D    +E  FD I+ NPP+ +   +D            
Sbjct: 248 LKACKVNFDALEVDG--TVLAGDAGCQIEERFDAIICNPPFHQGFNIDS----------- 294

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY---------NQKVDVVRIFESRKL 244
                            +   R L   G     +           +    V  +  S   
Sbjct: 295 ----------ELTAKFLNASKRLLAPRGRALFVVNNFIPLEKKAQDYFPRVREVARSNSF 344

Query: 245 FLVNA-FKD 252
            L+   FKD
Sbjct: 345 KLIMVSFKD 353


>gi|297560713|ref|YP_003679687.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845161|gb|ADH67181.1| methyltransferase small [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 226

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 27/192 (14%)

Query: 40  NAIVRSLK--HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
           + +        E +       +    R       + P   T     +AL  +   +    
Sbjct: 9   DLLRERHAAIEEPVEF-----ELLGRRWHALPGVYAPHLTTS----AALYSA--WVPFPV 57

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
                ++G GTG + + L   S        DIS +A E  + NA  +GV  R      D 
Sbjct: 58  NGAFCEVGCGTGYLSV-LAALSGCATVTATDISPEAAENTRMNAREHGVESRVHVYCGDM 116

Query: 158 FSSVEG--LFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F +V    L DV+  N  ++ +     +  G +   FDP  +          +R      
Sbjct: 117 FEAVPEGVLHDVVFWNSNFLSAAPEGGVKNGFDRSLFDPEYAS---------HRAFMQNA 167

Query: 214 SRHLNKDGLCSV 225
            R L   G   +
Sbjct: 168 ERVLAPSGRLLL 179


>gi|217965745|ref|YP_002351423.1| methyltransferase small domain protein [Listeria monocytogenes
           HCC23]
 gi|217335015|gb|ACK40809.1| methyltransferase small domain protein [Listeria monocytogenes
           HCC23]
 gi|307569708|emb|CAR82887.1| conserved hypothetical protein [Listeria monocytogenes L99]
          Length = 250

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK + + N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSILYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|104773938|ref|YP_618918.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|123251925|sp|Q1GAH2|PRMA_LACDA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|103423019|emb|CAI97705.1| Ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC 11842]
 gi|325125608|gb|ADY84938.1| Methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 314

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 53/212 (25%)

Query: 57  WRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       L +  +   ++P  + + ++               + LA        
Sbjct: 115 WKKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 174

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              + + D+GTG+G + +A   +      +  DIS +++  A+ NA  NG+ +     ++
Sbjct: 175 VKPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAEENAALNGIHD-IALQKT 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + V+G FD+IV+N                      ++             +   +  
Sbjct: 233 SLLADVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDS 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           HLN+DG      I Y Q   + +        +
Sbjct: 264 HLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 295


>gi|24114379|ref|NP_708889.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30064427|ref|NP_838598.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|81837977|sp|Q821A5|RLMG_SHIFL RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|24053548|gb|AAN44596.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30042686|gb|AAP18409.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|313648421|gb|EFS12864.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           2a str. 2457T]
 gi|332752763|gb|EGJ83148.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-671]
 gi|332754595|gb|EGJ84961.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           2747-71]
 gi|332765077|gb|EGJ95304.1| 23S rRNA methyltransferase [Shigella flexneri 2930-71]
 gi|333014758|gb|EGK34103.1| ribosomal RNA large subunit methyltransferase G [Shigella flexneri
           K-304]
          Length = 378

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHYARRCLKINGELYI 338


>gi|50401177|sp|Q9MBC2|MMT1_HORVU RecName: Full=Methionine S-methyltransferase; AltName:
           Full=AdoMet:Met S-methyltransferase; AltName:
           Full=Hv-MMT1
 gi|7634680|dbj|BAA94795.1| S-adenosyl-L-methionine: L-methionine S-methyltransferase [Hordeum
           vulgare subsp. vulgare]
          Length = 1088

 Score = 69.7 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 97/303 (32%), Gaps = 64/303 (21%)

Query: 3   ALRDSHSFL--CRVTGLSSHQ-----VIVDPDSVLDDRQRFFLTNAIVRS-LKHESIHRI 54
           A  D  +FL  C+ +G  +       V+   ++     +   L  A+ R          +
Sbjct: 4   AAGDVEAFLAACQASG-DAAYGAAKAVLERLEAPATRAEARRLLGAVRRRFAAGGPAAGL 62

Query: 55  LGWRDFY-------------------NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
             +R F+                    + +      F P   +    +            
Sbjct: 63  ECFRTFHFRIHDVVLDPHLQGFQQRKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDSIFRD 122

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-------- 147
           +    + +LG G G + +AL ++    K  G+DI+ + ++IA  N   N +         
Sbjct: 123 K---TVAELGCGNGWISIALAEKWCPSKVYGLDINPRPIKIAWINLYLNALDDDGLPIYD 179

Query: 148 -------ERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRI- 194
                  +R +  +SD  S     +   D IV   P I +   + +   V +   +  + 
Sbjct: 180 AEGKTLLDRVEFYESDLLSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFLY 239

Query: 195 ------SLDGGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRK 243
                 +L G ++   GL       +     +   GL    +G    Q V   R+F  R 
Sbjct: 240 SLSNYCALQGFVEDQFGLGLIARAVEEGISVIKPSGLMVFNMGGRPGQGV-CERLFLRRG 298

Query: 244 LFL 246
             +
Sbjct: 299 FRI 301


>gi|319648558|ref|ZP_08002772.1| hypothetical protein HMPREF1012_03811 [Bacillus sp. BT1B_CT2]
 gi|317389325|gb|EFV70138.1| hypothetical protein HMPREF1012_03811 [Bacillus sp. BT1B_CT2]
          Length = 255

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S           I+DL TG 
Sbjct: 16  ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGNIIDLCTGN 64

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G V L LL         GV+I  +  ++A  +   N + ++   ++ D  +  +      
Sbjct: 65  GIVPL-LLSTRTKAAITGVEIQERLYDMALRSVEYNNLQKQIHLIRDDLKNMPQVLGYNK 123

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            DV+  NPPY ++       L     +   +   +L            +    S+ L + 
Sbjct: 124 ADVVTCNPPYFKTPQKTEQNLNEHLAIARHEIYCTL----------EDVIRVSSKLLKQG 173

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K F + 
Sbjct: 174 GKLALVH---RPGRLLEIFELMKAFQIE 198


>gi|126733609|ref|ZP_01749356.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2]
 gi|126716475|gb|EBA13339.1| ribosomal L11 methyltransferase [Roseobacter sp. CCS2]
          Length = 313

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 73/191 (38%), Gaps = 48/191 (25%)

Query: 73  EPRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLK 117
            P  +  LL+D+A+AF                    +  +  +ILD+G GT  + +A  K
Sbjct: 128 VPDDKIPLLIDAAMAFGTGHHGTTKGCLEAFDALLSDGFEGEKILDVGCGTAVLGMAAAK 187

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
             P    +  DI   A+E+A++N ++NG+ +R   + +  F +      G +D+I +N  
Sbjct: 188 VLPHP-VLASDIDPVAVEVAQANVISNGLKDRVTCVVAAGFGAPALTENGPYDLIFAN-- 244

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            I    +  L  ++       +     DG +    I +                   Q  
Sbjct: 245 -ILKAPLIGLAPDLGAH---TA----DDGYAILSGILNE------------------QAD 278

Query: 234 DVVRIFESRKL 244
           DV+ +++    
Sbjct: 279 DVIAVYQQNGF 289


>gi|295397937|ref|ZP_06807994.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563]
 gi|294973822|gb|EFG49592.1| methyltransferase domain protein [Aerococcus viridans ATCC 11563]
          Length = 217

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 67/204 (32%), Gaps = 42/204 (20%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +      S  F  R   +      L      +++     +LDLG G G V + +    P
Sbjct: 40  RSFTFKTDSGVFS-RDNLDFGTRVMLEAL--DLDQLVPGDLLDLGAGYGPVGVIMGTMLP 96

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVI 179
                GVDIS +A+ +AK NA  N V +      S+ + ++    F VI++NPP      
Sbjct: 97  DRAIYGVDISERAIGLAKDNAAANHV-DNVTFQVSNAYEAIAKRDFGVILTNPP------ 149

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV------ 233
                  VR             G             +L   G   V +   Q        
Sbjct: 150 -------VRA------------GKEMVHHFMSEAIHYLKPGGEIYVVLQKKQGAPSAMKK 190

Query: 234 ------DVVRIFESRKLFLVNAFK 251
                 +V  I   +  +++ + K
Sbjct: 191 LEEVFGNVEEIERRKGYWILKSVK 214


>gi|184155284|ref|YP_001843624.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
           IFO 3956]
 gi|227514620|ref|ZP_03944669.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
           ATCC 14931]
 gi|260662211|ref|ZP_05863107.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           fermentum 28-3-CHN]
 gi|226710092|sp|B2GBW2|PRMA_LACF3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|183226628|dbj|BAG27144.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
           IFO 3956]
 gi|227087031|gb|EEI22343.1| ribosomal protein L11 methyltransferase [Lactobacillus fermentum
           ATCC 14931]
 gi|260553594|gb|EEX26486.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus
           fermentum 28-3-CHN]
          Length = 320

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 69/233 (29%), Gaps = 68/233 (29%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE--------LLV-------------DSALAFSLPRI 93
             W+ +Y+        T  P+ E          LLV              + L      I
Sbjct: 115 TAWQKYYHPVRVTRELTIVPQWEEYTPATADEKLLVLDPGMAFGTGTHPTTQLMLQALTI 174

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    ++D+GTG+G + +A  K+    +    DI   A++ AK N   N +++   T 
Sbjct: 175 ALRGGESMIDVGTGSGVLSIA-AKQLGAGEVWAYDIDDVAVKSAKKNLALNPIAKDVHTG 233

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +     +    D++V+N                      ++             +    
Sbjct: 234 VNSLLDGIHTQVDLVVAN---------------------ILA--------EIILPLVPQA 264

Query: 214 SRHLNKDGLCS--------VEIGYNQKVDVVRIFESRKLFLVNA--FKDYGGN 256
             +L   G            E        V +  E++   +      KD+ G 
Sbjct: 265 FENLKPGGKFLTSGIINTKFET-------VKKAIEAQGFVVDETMRIKDWYGI 310


>gi|187608197|ref|NP_001120451.1| TRM2 tRNA methyltransferase 2 homolog A [Xenopus (Silurana)
           tropicalis]
 gi|170285270|gb|AAI61232.1| LOC100145545 protein [Xenopus (Silurana) tropicalis]
          Length = 613

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 18/136 (13%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDL 104
            +  I G +  Y     +   +S   F    +        L  ++    +      +LD+
Sbjct: 388 PVEHIAGDQYIYEDLLGLTFRISPHAFF---QVNTPAAEVLYSAIADWAQLDQNTTVLDV 444

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSV 161
             GTG + ++L K+    K VG+++  +A+  AK+NA  N + +  +       D F ++
Sbjct: 445 CCGTGTIGISLAKKVK--KVVGIELCQEAIADAKANAQLNNL-DNVEFRCGKAEDIFPTL 501

Query: 162 EGLFDV----IVSNPP 173
              F       + +PP
Sbjct: 502 IYSFTFPSPLAIVDPP 517


>gi|157374030|ref|YP_001472630.1| methyltransferase small [Shewanella sediminis HAW-EB3]
 gi|262828717|sp|A8FRM9|TRMN6_SHESH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157316404|gb|ABV35502.1| methyltransferase small [Shewanella sediminis HAW-EB3]
          Length = 244

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 17/141 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D   ILD+G G+G + L +  +    K   +++   A+   + N   +  + R  
Sbjct: 29  WAPLSDAQNILDIGAGSGLLSL-MATQRSNAKVTSIELDDTAVNACQKNFEASPWTSRLT 87

Query: 152 TLQSDW-------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              S           S E LFD I+ NPPY +              +   +     D L 
Sbjct: 88  VKHSSVQEFSKQHQESEESLFDHIICNPPYFKGGTQSQ--------NRLRAQARHTDTLD 139

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               + + +   L  +G  S+
Sbjct: 140 FC-ALLEAIGSLLAPNGTASL 159


>gi|85713297|ref|ZP_01044318.1| 16S RNA G1207 methylase RsmC [Idiomarina baltica OS145]
 gi|85692877|gb|EAQ30854.1| 16S RNA G1207 methylase RsmC [Idiomarina baltica OS145]
          Length = 339

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 23/143 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+  A  L  + +    ++LD   G G +   + ++    +    D+S  A+   + N  
Sbjct: 183 DAGTALLLEHLPETIQGKVLDFACGCGVIGALVAQKFA-VELTASDVSPMAIASTQMNWE 241

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+  R   L     S  +G F+ I+SNPP+   +  D                     
Sbjct: 242 KLGIQGRL-ILADGLSSLSDGSFNWILSNPPFHTGLRTD--------------------- 279

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                       + L  +G   +
Sbjct: 280 YDIGEQFIKQAFKKLAPNGTLVI 302


>gi|283836357|ref|ZP_06356098.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           youngae ATCC 29220]
 gi|291067724|gb|EFE05833.1| ribosomal RNA small subunit methyltransferase D [Citrobacter
           youngae ATCC 29220]
          Length = 378

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  +       I+DLG G G + L LL+++P    V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPDNLEGEIVDLGCGNGVIGLTLLEKNPQASVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +N     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 SNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|328717321|ref|XP_003246171.1| PREDICTED: hemK methyltransferase family member 2-like
           [Acyrthosiphon pisum]
          Length = 307

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 58/249 (23%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRI-------------EKRDVVRILDLGTGTGA 110
               S   +EP  +T L++D  L   L ++             +K   + +++LG+G G 
Sbjct: 22  EFNTSPAVYEPAEDTFLMLD-VLELDLEQVVKTRLSKTNIGSSDKCGPLLVIELGSGFGI 80

Query: 111 VCLALLKESPF--------FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--- 159
           +  A+ K               + VD++  A          NGV    D ++ D  +   
Sbjct: 81  LTAAISKALSDSLSSYAVGAHCIAVDMNPTACLKTIMTCKLNGVD--VDAVRGDLLTWMR 138

Query: 160 -------------SVEGLFDVIVSNPPYI--ESVIVDCLGL-------EVRDFDPRIS-- 195
                         V G  D+++ NPPY+      +            +   +  +++  
Sbjct: 139 RPGTTDVNNDPNKEVFGPIDILLFNPPYVRGPKGELAPTPRVTKIDTNDQAKYQKQVAVE 198

Query: 196 ----LDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKLFLVN-- 248
               L GG DG+   +      +  L++ G+   + I YN    V    ++R+       
Sbjct: 199 DAAWLGGGPDGVDVLKRALHQAADLLSEFGVFYALMIDYNYDALVRDEMQARRDRSDQNI 258

Query: 249 AFKDYGGND 257
            + D    +
Sbjct: 259 YYDDLNNIE 267


>gi|47096983|ref|ZP_00234558.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|254899511|ref|ZP_05259435.1| methyltransferase small domain protein [Listeria monocytogenes
           J0161]
 gi|254913286|ref|ZP_05263298.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937667|ref|ZP_05269364.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|47014646|gb|EAL05604.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
           F6854]
 gi|258610267|gb|EEW22875.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293591287|gb|EFF99621.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|294651383|ref|ZP_06728701.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292822738|gb|EFF81623.1| rRNA (guanine-N(2)-)-methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 341

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 27/198 (13%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGW--RDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
             R        I ++ + + +   L     D    RL + +       +    +D+  A 
Sbjct: 129 SARHCQLWQMQIEKTEQLKPLDHWLKTYTVDMGEDRLEVCALPGVFSQDH---LDTGTAV 185

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            +P + +    +I D G G G +   L K  P      +D+   AL   +     NG++ 
Sbjct: 186 LVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTFQRNGLNL 245

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                     F+      D IVSNPP+ + +  D                          
Sbjct: 246 AHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD---------------------YDASE 284

Query: 208 TIADGVSRHLNKDGLCSV 225
           T+      HL + G   +
Sbjct: 285 TLCRRAKLHLKRSGELWI 302


>gi|226951700|ref|ZP_03822164.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           ATCC 27244]
 gi|226837565|gb|EEH69948.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           ATCC 27244]
          Length = 341

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 27/198 (13%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGW--RDFYNVRLTLSSDTFEPRPETELLVDSALAF 88
             R        I ++ + + +   L     D    RL + +       +    +D+  A 
Sbjct: 129 SARHCQLWQMQIEKTEQLKPLDHWLKTYTVDMGEDRLEVCALPGVFSQDH---LDTGTAV 185

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS- 147
            +P + +    +I D G G G +   L K  P      +D+   AL   +     NG++ 
Sbjct: 186 LVPYLPQVKSGKIADFGCGAGIISAYLAKLHPNQHIFALDVDAFALRSTEMTFQRNGLNL 245

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                     F+      D IVSNPP+ + +  D                          
Sbjct: 246 AHLHLQPVTGFADAPKDLDAIVSNPPFHQGIHTD---------------------YDASE 284

Query: 208 TIADGVSRHLNKDGLCSV 225
           T+      HL + G   +
Sbjct: 285 TLCRRAKLHLKRSGELWI 302


>gi|169830661|ref|YP_001716643.1| ribosomal L11 methyltransferase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637505|gb|ACA59011.1| ribosomal L11 methyltransferase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 292

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A  K     +   +D    A++ A+     N +  R   ++ + 
Sbjct: 156 GARVLDVGTGSGILAVAAAKLGAG-RVCAIDKDPVAIKAARETVAQNNLQGRITIIEGNL 214

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL-----DGGIDGLS 204
              V    D++V+N      ++ + +       +P  +L         +GL+
Sbjct: 215 LDQVTEKCDLLVANL--HPHLLEELIPAAFSRINPGGALILTGFTADDEGLA 264


>gi|229163257|ref|ZP_04291212.1| Ribosomal protein L11 methyltransferase [Bacillus cereus R309803]
 gi|228620320|gb|EEK77191.1| Ribosomal protein L11 methyltransferase [Bacillus cereus R309803]
          Length = 312

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAKLGASA-VQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|218290104|ref|ZP_03494266.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
 gi|218239813|gb|EED07002.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
          Length = 413

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD    TGA  +             VDIS  A+E+A+ NA  NGV +R D   ++
Sbjct: 235 DGAHVLDCFCHTGAFAVH-ALHYGAAHVTAVDISADAVELARQNARRNGVLDRADFAVAN 293

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +         +DV++ +PP                     +  G       Y+ I 
Sbjct: 294 AFDYLREQDARGARYDVVILDPPAFAKSRQSI----------ESATRG-------YKEIN 336

Query: 211 DGVSRHLNKDGLCS 224
               R L + G   
Sbjct: 337 LRAMRILREGGFLV 350


>gi|332535482|ref|ZP_08411263.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035092|gb|EGI71607.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 341

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 64/207 (30%), Gaps = 54/207 (26%)

Query: 61  YNVRLTLS-----------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           Y+ +  ++              F         +D      L         ++LD G G G
Sbjct: 161 YHKKFVVNVADTEFTAISVPGVFNHGS-----LDIGTKVLLENAPTIKQGKVLDFGCGAG 215

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            +   L   +P  + V  D+S  A    +     N ++   + + SD   S+ G FD+I+
Sbjct: 216 LIATFLGLHNPALEFVCSDVSALATYATQQTLKLNNING--EAILSDGLKSINGKFDLII 273

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC------ 223
           SNPP+   +  D    E                     T      +HL K G        
Sbjct: 274 SNPPFHTGIATDYTVAE---------------------TFLTNAKQHLTKLGKLNIVANS 312

Query: 224 ------SVEIGYNQKVDVVRIFESRKL 244
                  +E    Q      +F++ K 
Sbjct: 313 FLKYPPILE---TQFESYQTVFKNNKF 336


>gi|153792070|ref|NP_001093345.1| TRM2 tRNA methyltransferase 2 homolog A [Xenopus laevis]
 gi|148745595|gb|AAI42551.1| LOC100101284 protein [Xenopus laevis]
          Length = 612

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 18/136 (13%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDL 104
            +  + G +  Y     +   +S   F    +   L    L  ++    +      +LD+
Sbjct: 387 PVEHVAGDQYIYEDLLGLSFRISPHAFF---QVNTLAAEVLYSAIGDWAQLDQDTTVLDV 443

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSV 161
             GTG + ++L K+    K VG+++  +A+  AK+NA  N + +  +       D F ++
Sbjct: 444 CCGTGTIGISLAKKVK--KVVGIELCQEAIADAKANAQLNNL-DNVEFRCGKAEDIFPTL 500

Query: 162 EGLFDV----IVSNPP 173
              +       + +PP
Sbjct: 501 INSYTFPSPLAIVDPP 516


>gi|16802213|ref|NP_463698.1| hypothetical protein lmo0165 [Listeria monocytogenes EGD-e]
 gi|16409524|emb|CAC98380.1| lmo0165 [Listeria monocytogenes EGD-e]
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPVRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|328467643|gb|EGF38698.1| ribosomal protein L11 methyltransferase [Lactobacillus helveticus
           MTCC 5463]
          Length = 315

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 69/265 (26%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +        ++ LK   +           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADRDELVKKFQDKMQELKGYGLNIGDAKITTSYIEDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALA-------------FSLPRIEKRDVVRIL 102
                L +      ++P  + + L+  D  LA               L R   +  + ++
Sbjct: 123 NFSRHLAIVPKWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAIVKKPISVV 182

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G + +A   +      +  DIS +++   + N+  N +       ++   + V+
Sbjct: 183 DVGTGSGILAIA-ASKLGATDILATDISDESMTATEQNSALNDIK-NIRVQKTSLLADVD 240

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD+IV+N                      ++             +   +  HLN+ G 
Sbjct: 241 GKFDIIVAN---------------------ILA--------EILLELIPQMDAHLNEGGQ 271

Query: 223 CSV-EIGYNQKVDVVRIFESRKLFL 246
                I Y Q   + +  +     +
Sbjct: 272 VIFSGIDYLQLPKIEKSLDENGFKI 296


>gi|307823227|ref|ZP_07653457.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96]
 gi|307736002|gb|EFO06849.1| ribosomal L11 methyltransferase [Methylobacter tundripaludum SV96]
          Length = 242

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 19/184 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              +      +  D+ L  ++  +      R+LD+GTGTG + L +  +    K   V++
Sbjct: 10  SVLQQHSGMRICTDAVLFGAM--VPVNPGDRVLDIGTGTGVLAL-MAAQLGAAKVTAVEL 66

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI--VDCLG 184
           +  A + A  N   +   +R + +  D  S   +    +D+I+SNPP+ E+ +  VD L 
Sbjct: 67  TQVAFKEADINFNNSPWVDRLEAVHQDIQSFALTASRQYDLIISNPPFFENHLKTVDTLR 126

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              R            D L     +     + L+  GL  + +  +          +   
Sbjct: 127 NSARH----------TDQLPFAD-LIGIAEQLLSPQGLFYLLLPAHAVAKFSAQALAAGF 175

Query: 245 FLVN 248
           +L+N
Sbjct: 176 YLIN 179


>gi|217969982|ref|YP_002355216.1| methyltransferase small [Thauera sp. MZ1T]
 gi|217507309|gb|ACK54320.1| methyltransferase small [Thauera sp. MZ1T]
          Length = 425

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 73/220 (33%), Gaps = 59/220 (26%)

Query: 62  NVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             R+      + P R E   L+         R          D+GTGTG +  ALL    
Sbjct: 189 GERIHPWYGVYSPIRGEYLDLI--------ARAPLPATTLAFDIGTGTGVIA-ALLARRG 239

Query: 121 FFKGVGVDISCKALEIAKSN--------------------------AVTNGVSE---RFD 151
             + V  D+S +AL  A+ N                          A    +     R  
Sbjct: 240 VARVVATDLSPRALGCAQQNLARLELLAGAAAEEGAPGTTSCTIPGAAAPDLQVAAGRVQ 299

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            LQ+D F    G   ++V NPP++ +     +   V D D R+            R    
Sbjct: 300 LLQADLFPP--GRAPLVVCNPPWVPAKPSSAIEHAVYDPDSRM-----------LRGFLA 346

Query: 212 GVSRHLNKD--GLCSV----EI-GYNQKVDVVRIFESRKL 244
           G++ H+ +   G   +    E  G   + +++   E+  L
Sbjct: 347 GLAEHVEEGGEGWLILSDLAEHLGLRSRAELLGWIEAAGL 386


>gi|303238635|ref|ZP_07325168.1| ribosomal protein L11 methyltransferase [Acetivibrio cellulolyticus
           CD2]
 gi|302593754|gb|EFL63469.1| ribosomal protein L11 methyltransferase [Acetivibrio cellulolyticus
           CD2]
          Length = 314

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 50/188 (26%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEK--------------R 96
           W+ +Y           +P  E+        +V+     +                    +
Sbjct: 114 WKKYYKPLNLTDKLVIKPSWESYEKKNDEIVVEMDPGMAFGTGTHETTQMCSILLEKYVK 173

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +++DLG GTG + +   K         VDI   A+++AK N   NGV  +    +  
Sbjct: 174 PGDKVIDLGCGTGILSIIAAKLGAEA-VTAVDIDEVAVKVAKENCAINGVDGKVSAFRGV 232

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                +   D+IV+N   I +VI+D                           I+  +  +
Sbjct: 233 IDDLKKEKADIIVAN--IIANVIID---------------------------ISSKIPSY 263

Query: 217 LNKDGLCS 224
           L KDGL  
Sbjct: 264 LKKDGLFV 271


>gi|153833970|ref|ZP_01986637.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio harveyi HY01]
 gi|148869708|gb|EDL68689.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio harveyi HY01]
          Length = 385

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           +++L    + +     +   +D    F L  + +   ++ ++DLG G G + + + + +P
Sbjct: 199 SIQLKNLPNVY-----SGESLDLGARFMLQHLPQDPTLKHVIDLGCGNGVLSVKMGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             +   VD S  A+E AK N + N    R    + ++          D+++ NPP+ +  
Sbjct: 254 QARLTSVDESFMAIESAKQNLLDNLGDARDIQCIANNCLDGFTPDCADMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + LN+ G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQILNQGGKLLVIGNRHLGYD--AR 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + LV
Sbjct: 351 LKRLFGDKNVKLV 363


>gi|307266433|ref|ZP_07547969.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306918541|gb|EFN48779.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 308

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 31/124 (25%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +A  K     +    DI   ++E+A+ N   N +       +SD    
Sbjct: 177 VFDVGCGSGILSIASSKLGAK-EVYAADIDEASVEVARQNIELNNLQ-NVKVFKSDLLGE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  D+IV+N                      I+             ++    ++L ++
Sbjct: 235 FRGKADIIVAN---------------------IIA--------DVIIKLSAEAPKYLKEE 265

Query: 221 GLCS 224
           GL  
Sbjct: 266 GLFL 269


>gi|117926976|ref|YP_867593.1| rRNA (guanine-N(2)-)-methyltransferase [Magnetococcus sp. MC-1]
 gi|117610732|gb|ABK46187.1| 16S rRNA m(2)G 1207 methyltransferase [Magnetococcus sp. MC-1]
          Length = 356

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 65/227 (28%), Gaps = 52/227 (22%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
            ++ E  +         +V L      F          D+A    L  ++ + +  +LD 
Sbjct: 168 RVEGEPFYHYQN----GDVTLATLPGLFSWAEP-----DAASLMLLQALQHQRMYHLLDW 218

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--E 162
           G G G +   L K  P  +    D   +A   +  +   N +  R   +  D        
Sbjct: 219 GCGCGLIGTTLAKHHPTLQVTLSDDMVRATRCSTESVRLNQLQARCQVILEDGIGPHLRN 278

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD IV+NPP+        L  EV       +L                  + L + G 
Sbjct: 279 QGFDTIVTNPPFHRG---QSLNREV-------AL-----------EFIGDAVKILERGGA 317

Query: 223 CSVEIGYNQKVDVVRIFESRK------LFLVNAF-KDYGGNDRVLLF 262
             +         V   F             V    +D     R +++
Sbjct: 318 LWL---------VANSFLDYGPILQASFKKVETVLRDS----RFIVW 351


>gi|290892275|ref|ZP_06555270.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290558101|gb|EFD91620.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK + + N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSILYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|317486424|ref|ZP_07945251.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6]
 gi|316922334|gb|EFV43593.1| hypothetical protein HMPREF0179_02609 [Bilophila wadsworthia 3_1_6]
          Length = 262

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 17/174 (9%)

Query: 82  VDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKS 139
           VD+ L  +       DV  R +DLGTG G V LA LL +    +G G+D + + +  A++
Sbjct: 39  VDALLLAAFAVSRTTDVTMRFIDLGTGCGVVGLAYLLLKRNICQGFGMDCNPELIAAAQN 98

Query: 140 NAVTNGVSERFDTLQSDW-----FSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           N    G S+RF     +        ++        ++++NPP+           E R   
Sbjct: 99  NTAKLGFSDRFALHTGELADTRFLENLRMEASPVQLVMANPPWRLVGSGRLPATEAR--- 155

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            R +L G       +   A   S  L +DG  +  I  ++  D++       L 
Sbjct: 156 -RKALFGDK---GTFPLFASAASSLLEEDGRFACIISPDRLQDMLAALNGAGLT 205


>gi|320530691|ref|ZP_08031735.1| methyltransferase small domain protein [Selenomonas artemidis
           F0399]
 gi|320136978|gb|EFW28916.1| methyltransferase small domain protein [Selenomonas artemidis
           F0399]
          Length = 215

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L    PR+  R+  R+LDLGTG G + L ++ E    + + V+++     +A  NA
Sbjct: 1   MDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDEVR--EVLAVELNSAQAALAVRNA 56

Query: 142 VTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             NGVSE+    + D+       V   FD++ +NPPY  
Sbjct: 57  ALNGVSEKITVREGDYRDPPALFVFESFDLVFANPPYYP 95


>gi|311028966|ref|ZP_07707056.1| methyltransferase [Bacillus sp. m3-13]
          Length = 252

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 31/203 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F    +  LL                   I+DL TG 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFSLDAVLLAQFVYVPI-------QKGNIMDLCTGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G + L L K +      GV+I  +   +A+ +   NG+ +R   +  D            
Sbjct: 59  GIIPLLLSKRTRG-NITGVEIQERLAGMAERSFSYNGLEDRLKIINMDLKELPAMLENKK 117

Query: 165 FDVIVSNPPYIESVIVDC-----LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +DV+  NPPY      +      +   +   +   +L            +   ++    +
Sbjct: 118 YDVVTCNPPYFPLTEQEEKINSNIHYAIARHEIECTL-------EDVVRVCSQIT---KQ 167

Query: 220 DGLCSVEIGYNQKVDVVRIFESR 242
            G  +      + +D++ +    
Sbjct: 168 GGKVAFVHRPGRLLDIISLMRKY 190


>gi|307291612|ref|ZP_07571488.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0411]
 gi|306497373|gb|EFM66914.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0411]
          Length = 198

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 70/215 (32%), Gaps = 45/215 (20%)

Query: 51  IHRILGWRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           +   L    F         ++D+      T       L  +    E     R+LD+G G 
Sbjct: 12  LAHDLESWSFPLRGRTFQFTTDSGVFSRGTVDYGSRVLIDAFEW-ENLPAGRLLDVGCGY 70

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + L+L   +       VD++ +A+ +A+ NA  N    +  T+ + + +  E  +  I
Sbjct: 71  GPIGLSLAAATGRL-VEMVDVNQRAVGLAQMNAQRN----QITTVDNVYETLNETTYAAI 125

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           VSNPP                            G      I  G    L   G  +V I 
Sbjct: 126 VSNPPIRA-------------------------GKKVVHGILTGAFPLLKVGGTLTVVIQ 160

Query: 229 YNQKV-----DVVRIF-------ESRKLFLVNAFK 251
             Q        +  +F       + +  +++ + K
Sbjct: 161 KKQGAPSAEKKMAEVFGNVEIVTKDKGYYILRSVK 195


>gi|227824691|ref|ZP_03989523.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
           D21]
 gi|226905190|gb|EEH91108.1| 50S ribosomal protein L11 methyltransferase [Acidaminococcus sp.
           D21]
          Length = 313

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + + D+GTG+G + +             +DI  KA+E+AK N   N +S R    + +
Sbjct: 175 PNIDVYDVGTGSGILAMTAALMGARS-IHAIDIDGKAVEVAKENIAKNHLSNRITVKKGN 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
                +   D+IV+N   I  +I+  L    + 
Sbjct: 234 LLDDADEKADLIVAN--IIADIIITLLPDAFKK 264


>gi|160935001|ref|ZP_02082387.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753]
 gi|156866454|gb|EDO59826.1| hypothetical protein CLOLEP_03877 [Clostridium leptum DSM 753]
          Length = 306

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 59/248 (23%)

Query: 2   QALRDSHSFL--CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR-SLKHESIH------ 52
           +A   +H  L    +        +V     +   +      A +R     E I       
Sbjct: 41  EAREIAHIDLIDEELLAKDREHGLVHL--YISPEENPKEALAFLRERCAGEGIDCEFSVE 98

Query: 53  ------RILGWRDFYNV-----RLTLSSDT---FEPRPETELLVDSALAFSLPRIEK--- 95
                  I  W+ +++      +L +       ++P+  T L ++  LAF     E    
Sbjct: 99  SCAEEDWINNWKQYFHPIPVGEKLLIRPTWEEAYDPQGRTVLHLEPGLAFGTGTHETTRL 158

Query: 96  ---------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                    +  + +LD+G G+G + +A L      K VGVDI   A++ A  NA TNGV
Sbjct: 159 CLELLEKYLKPGMSLLDVGCGSGILSVAGLLLGAE-KAVGVDIDALAVKTAGENAQTNGV 217

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSN--------------------PPYIESVIVDCLGLE 186
            E+F  +  +    V G ++++V+N                      Y+ S I+D    E
Sbjct: 218 EEKFQGICGNLTDQVAGKYELVVANIVADIIILLTKDITRYLNPDSIYLMSGIIDTRVQE 277

Query: 187 VRD-FDPR 193
           VRD  +PR
Sbjct: 278 VRDALEPR 285


>gi|153953538|ref|YP_001394303.1| ribosomal protein L11 methyltransferase [Clostridium kluyveri DSM
           555]
 gi|219854160|ref|YP_002471282.1| hypothetical protein CKR_0817 [Clostridium kluyveri NBRC 12016]
 gi|189037694|sp|A5N6M4|PRMA_CLOK5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254783297|sp|B9E043|PRMA_CLOK1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146346419|gb|EDK32955.1| PrmA [Clostridium kluyveri DSM 555]
 gi|219567884|dbj|BAH05868.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 312

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 70/199 (35%), Gaps = 36/199 (18%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETEL------LVD------------SALAFSLPRIEK-- 95
           GW+ +Y           +P  E         +V+                  +  +EK  
Sbjct: 115 GWKKYYKPYRAGEKIVIKPLWEEYENKKQDIVVEIDPGMAFGTGTHETTKMCIKALEKYV 174

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    + D+GTG+G + +A   +    +   VD+   A+E A  N   N +         
Sbjct: 175 RPESNVFDIGTGSGILAIA-ASKLGAKEVTAVDLDPVAVESALKNISYNNIK-NIKVFHG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY----RTIAD 211
           +    V G  D++V N   I + ++  L  EV+ F     L      +S      R   +
Sbjct: 233 NLMEGVHGKADILVIN---IIADVILSLTEEVKKF-----LVSEGIFISSGIIIDRK--E 282

Query: 212 GVSRHLNKDGLCSVEIGYN 230
            V  +L  +G C  EI  +
Sbjct: 283 EVVENLQNNGFCIREINED 301


>gi|187732632|ref|YP_001881841.1| methyltransferase family protein [Shigella boydii CDC 3083-94]
 gi|229470407|sp|B2U1T3|RLMG_SHIB3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|187429624|gb|ACD08898.1| methyltransferase family protein [Shigella boydii CDC 3083-94]
          Length = 378

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 3/95 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
           TN     +R + + ++  S VE   F+ ++ NPP+
Sbjct: 274 TNMPEALDRSEFMINNALSGVEPFRFNAVLCNPPF 308


>gi|255527290|ref|ZP_05394170.1| methyltransferase [Clostridium carboxidivorans P7]
 gi|296188353|ref|ZP_06856745.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7]
 gi|255509028|gb|EET85388.1| methyltransferase [Clostridium carboxidivorans P7]
 gi|296047479|gb|EFG86921.1| hypothetical protein CLCAR_3880 [Clostridium carboxidivorans P7]
          Length = 246

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 27/173 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +++     ++DL TGTG V   L  ++   K VG++I  + +E+A  + 
Sbjct: 33  VDAVLLANFAVVKRN--AEVIDLCTGTGIVPFILAGKTEASKIVGIEIQEEMVEMADRSC 90

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPY-------IESVIVDCLGLEVRDF 190
           + N + ++   + +D     F       DV+  NPPY       +     D +       
Sbjct: 91  MFNKLEDKIKFINTDLKDLKFLKNLSKVDVVTVNPPYKLKNSGIVNPNDKDAIAR----H 146

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +   +L            +       L  +G   +    ++  D++ +    K
Sbjct: 147 EICCTL----------EDVIKACKAVLKDNGRMYMIHRPDRLADIICLMRKYK 189


>gi|117919381|ref|YP_868573.1| methyltransferase small [Shewanella sp. ANA-3]
 gi|229470404|sp|A0KTP8|RLMG_SHESA RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|117611713|gb|ABK47167.1| methyltransferase small [Shewanella sp. ANA-3]
          Length = 377

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + + D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLDNLPQGDFKTIVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +E+      D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 NNQLPAEKGHFHWDDCMTHLPDGVEPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKNGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|333025379|ref|ZP_08453443.1| putative rRNA or tRNA methyltransferase [Streptomyces sp. Tu6071]
 gi|332745231|gb|EGJ75672.1| putative rRNA or tRNA methyltransferase [Streptomyces sp. Tu6071]
          Length = 540

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  V  +LDLGTG+G   L     SP   +    D++ +AL  A      +G       L
Sbjct: 182 RTPVGSVLDLGTGSGIQAL---HASPHAARLTATDLNPRALVFAALTLALSGAKP-ARLL 237

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               F  V    FD+++SNPP++ S                   DGG +G    R +   
Sbjct: 238 AGSLFEPVGTETFDLVLSNPPFVISPGARLTYR-----------DGGREGDGLCRELVSS 286

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
               LN+ G       +  
Sbjct: 287 AGERLNEGGYAQFLANWEH 305


>gi|330508817|ref|YP_004385245.1| methyltransferase [Methanosaeta concilii GP-6]
 gi|328929625|gb|AEB69427.1| methyltransferase, putative [Methanosaeta concilii GP-6]
          Length = 198

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S  +F  R +       A         + D+  + DLG GTG + +         + VGV
Sbjct: 17  SEPSFI-REQYATPASVAAEILFLAALRNDLGTVCDLGCGTGVLAIGAALM--GARAVGV 73

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +I   AL  A+ NA   GV    D +++D         D ++ NPP+
Sbjct: 74  EIDKDALATARKNAENLGV--HVDFIRADVRKLELEGIDTVIMNPPF 118


>gi|125977774|ref|XP_001352920.1| GA17699 [Drosophila pseudoobscura pseudoobscura]
 gi|54641671|gb|EAL30421.1| GA17699 [Drosophila pseudoobscura pseudoobscura]
          Length = 631

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 32/164 (19%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA-----------------IVRSLKHE---S 50
           L  V G+ S  +  D    L    + F  +A                 +      +    
Sbjct: 302 LMLVAGIYSSNLSEDEQQELKQELKSFYEHASEQDDATFKCTSLYYQDVKHREAGQMVNP 361

Query: 51  IHRILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
           +  ILG          ++  +S   F         +L   A+    P  +      +LD+
Sbjct: 362 VDHILGTTHITDTIQGLQFRISPLAFFQINTEGANVLYQQAIDLVAPTKD----TTMLDI 417

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             GTG + LA  K     + +GV+I   A++ A+ NA  NG+  
Sbjct: 418 CCGTGTIALAFAKHCK--RVLGVEIVPDAIKDAQFNAEANGIKN 459


>gi|313611411|gb|EFR86094.1| methyltransferase small domain-containing protein [Listeria
           monocytogenes FSL F2-208]
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK + + N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSILYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|251779390|ref|ZP_04822310.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
 gi|243083705|gb|EES49595.1| SAM-dependent methyltransferase [Clostridium botulinum E1 str.
           'BoNT E Beluga']
          Length = 250

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 19/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +      I+ +   R++DL TGTG +   L  +    +  G++I  + + +A+ + 
Sbjct: 36  VDAVILSDFANIKNKH--RVIDLCTGTGIIPFLLYGKYSPREIYGLEIQEEMVNMAEKSV 93

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + ++   ++ D     +      FDV+  NPPY      +I     L +   +   
Sbjct: 94  KLNALEDKITFMKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPTDKLAIARHEVLC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +L            +       L  +G   +     +  D+  +    K
Sbjct: 154 NL----------EDVIYASKILLKDNGRMFIVHRPERLADIFTLMRKYK 192


>gi|332685759|ref|YP_004455533.1| ribosomal RNA small subunit methyltransferase C [Melissococcus
           plutonius ATCC 35311]
 gi|332369768|dbj|BAK20724.1| ribosomal RNA small subunit methyltransferase C [Melissococcus
           plutonius ATCC 35311]
          Length = 200

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 70/206 (33%), Gaps = 46/206 (22%)

Query: 65  LTLSSDTFEPRPETELL----VDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKE 118
             L +  F    +T +     +D      +     +++    +LD+G G G + L L   
Sbjct: 21  FELKNQVFHFETDTHVFSRKTIDYGTRVLIDTFNGKELPEGDMLDVGCGYGPIGLTLASV 80

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +  F    VD++ +A+ +AK NA  N +    D   S+ +  +    +  I+SNPP    
Sbjct: 81  TGRF-VEMVDVNQRAIGLAKENAKRNHIK-NVDIHYSNIYDELNRSHYAAIISNPPIRA- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---- 233
                                   G +    I  G  + L   G  +V I   Q      
Sbjct: 138 ------------------------GKTVVHNILSGAHQLLESKGTLTVVIRKKQGAPSAE 173

Query: 234 -DVVRIF-------ESRKLFLVNAFK 251
             +  IF         +  +++ + K
Sbjct: 174 KKMKEIFGNVEIVTRDKGYYVLRSTK 199


>gi|299144168|ref|ZP_07037248.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518653|gb|EFI42392.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 314

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 70/219 (31%), Gaps = 60/219 (27%)

Query: 57  WRDFYNVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVR--------------- 100
           W+ +Y+  + +       P  E     D  +    P +                      
Sbjct: 115 WKKYYH-PIEIGEKILIKPTWEEYENKDRIVIDIDPGMAFGTGTHETTYMCIEALEEYVK 173

Query: 101 ----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G G+G + +A +K     K + VDI  K +E +  NA  N VSE+    + +
Sbjct: 174 QDNIVFDIGCGSGILGIAAIKLGAE-KVIAVDIDQKCIEASLENANMNNVSEKIKVYKGN 232

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V G  D+IVSN   I  +IVD                           +   + RH
Sbjct: 233 LLDVVSGNADIIVSN--IIAEIIVD---------------------------MIGDLKRH 263

Query: 217 LNKDGL-----CSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           L  +G+       VE    +   V          ++   
Sbjct: 264 LTSNGIFISSGIIVE----KIDMVKNALIKEGFEIIEIR 298


>gi|94499560|ref|ZP_01306097.1| rRNA (guanine-N(2)-)-methyltransferase [Oceanobacter sp. RED65]
 gi|94428314|gb|EAT13287.1| rRNA (guanine-N(2)-)-methyltransferase [Oceanobacter sp. RED65]
          Length = 366

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAF--SLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   L   ++ F  R + +L  +  L    S+    ++   ++ DL  G+G + L   + 
Sbjct: 187 HGQTLWTHANVFG-RDKLDLGAEFFLQHFKSIQSQCQKAQPKVADLCAGSGILGLKFKEL 245

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    D S  A+E  + +   N           D   + E +FD+I+ NPP+ E+ 
Sbjct: 246 APDSELHFYDESAMAIESCQLSWQANQTDSNVAFHWQDGLENAEPVFDLILCNPPFHENN 305

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   V D                 R +     + L + G   +
Sbjct: 306 T-------VSDH--------------IARRLFKQAKQALAEQGQLYI 331


>gi|332304898|ref|YP_004432749.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172227|gb|AEE21481.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 383

 Score = 69.7 bits (170), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 61/172 (35%), Gaps = 33/172 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   +  RI+DLG G G + L +L +SP      VD S  A+  AK N  
Sbjct: 218 DIGARVLLAYLPDANHKRIIDLGCGNGVLGLHVLHQSPDAHVTFVDESFMAIASAKMNIE 277

Query: 143 TNGVS--ERFDTLQSDWFS------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N     ++ + L S+         + +   D+++ NPP+ +   +             I
Sbjct: 278 QNMPDKLKQCEFLVSNCLDEYLRTPANDASVDIVLCNPPFHQQNTITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRK 243
           +L            +     R L   G   V +G         + R+F   K
Sbjct: 328 AL-----------QMFKDSKRILKHGGELRV-VGNRHLDYPQTIKRLFGHYK 367


>gi|323127662|gb|ADX24959.1| Methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           ATCC 12394]
          Length = 284

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  + D F         +DS L    P++  + +  I+DL +G GAV L        
Sbjct: 45  DVRIIQNKDVFSYS------IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTK 95

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              V V++  +  ++ + +   N + ++   +  D    +  +     D+++ NPPY +S
Sbjct: 96  AAIVEVELQERLADMGRRSIQLNQLEDQVTMICDDLKHLLNHVPRSGVDLMLCNPPYFKS 155

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  +         +   +L            I       L  +G  ++    ++ +
Sbjct: 156 HESSKKNVSEHYLLARHEITTNL----------EEICQVARHALKSNGRLAMVHRPDRFL 205

Query: 234 DVVRIFESRKLFLVNA 249
           +++    +  L     
Sbjct: 206 EIIDSLRANGLAPKRV 221


>gi|116513947|ref|YP_812853.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus ATCC BAA-365]
 gi|122275283|sp|Q04AV7|PRMA_LACDB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116093262|gb|ABJ58415.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
          Length = 314

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 53/212 (25%)

Query: 57  WRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       L +  +   ++P  + + ++               + LA        
Sbjct: 115 WKKYYHVINLSRHLAIVPEWEDYQPVFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 174

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              + + D+GTG+G + +A   +      +  DIS +++  A+ NA  NG+ +     ++
Sbjct: 175 VKPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKT 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + V+G FD+IV+N                      ++             +   +  
Sbjct: 233 SLLADVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDS 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           HLN+DG      I Y Q   + +        +
Sbjct: 264 HLNEDGQVIFSGIDYLQLPKIEQALAENSFQI 295


>gi|318060828|ref|ZP_07979551.1| rRNA or tRNA methyltransferase [Streptomyces sp. SA3_actG]
 gi|318079152|ref|ZP_07986484.1| rRNA or tRNA methyltransferase [Streptomyces sp. SA3_actF]
          Length = 540

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  V  +LDLGTG+G   L     SP   +    D++ +AL  A      +G       L
Sbjct: 182 RTPVGSVLDLGTGSGIQAL---HASPHAARLTATDLNPRALVFAALTLALSGAKP-ARLL 237

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               F  V    FD+++SNPP++ S                   DGG +G    R +   
Sbjct: 238 AGSLFEPVGTETFDLVLSNPPFVISPGARLTYR-----------DGGREGDGLCRELVSS 286

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
               LN+ G       +  
Sbjct: 287 AGERLNEGGYAQFLANWEH 305


>gi|291302530|ref|YP_003513808.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
 gi|290571750|gb|ADD44715.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
          Length = 481

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 15/132 (11%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +R V   LD+GTG G +   L   +   +  G DIS +AL  A +NAV NG+   ++ L 
Sbjct: 145 RRPVESALDVGTGGGVLAFDLSGHAK--RVTGTDISRRALLFAATNAVLNGLD--WELLA 200

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D    V G  FD IVSNPP+I       +G    DFD R   D G  G +    +A   
Sbjct: 201 GDMLEPVAGRRFDQIVSNPPFI-------VGPGHGDFDYR---DSGRPGDAVCAELAAAA 250

Query: 214 SRHLNKDGLCSV 225
              LN  G    
Sbjct: 251 PGLLNPGGTLQF 262


>gi|229157926|ref|ZP_04285999.1| Ribosomal protein L11 methyltransferase [Bacillus cereus ATCC 4342]
 gi|228625534|gb|EEK82288.1| Ribosomal protein L11 methyltransferase [Bacillus cereus ATCC 4342]
          Length = 312

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVTVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|161507421|ref|YP_001577375.1| ribosomal protein L11 methyltransferase [Lactobacillus helveticus
           DPC 4571]
 gi|172048274|sp|A8YUZ6|PRMA_LACH4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|160348410|gb|ABX27084.1| ribosomal protein L11 methyltransferase [Lactobacillus helveticus
           DPC 4571]
          Length = 315

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 84/265 (31%), Gaps = 69/265 (26%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI---------HRI------LGWRDFYN-- 62
                  D   D  +        ++ LK   +           I        W+ +Y+  
Sbjct: 63  TYFYAYFDEEADRDELVKKFQDKMQELKGYGLNIGDAKITTSYIEDQDWNTAWQKYYHVI 122

Query: 63  ---VRLTLSSDT--FEPRPETELLV--DSALA-------------FSLPRIEKRDVVRIL 102
                L +      ++P  + + L+  D  LA               L R   +  + ++
Sbjct: 123 NFSRHLAIVPKWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLERAIVKKPISVV 182

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+GTG+G + +A   +      +  DIS +++   + N+  N +       ++   + V+
Sbjct: 183 DVGTGSGILAIA-ASKLGATDILATDISDESMTATEQNSALNDIK-NIRVQKTSLLADVD 240

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G FD+IV+N                      ++             +   +  HLN+ G 
Sbjct: 241 GKFDIIVAN---------------------ILA--------EILLELIPQMDAHLNEGGQ 271

Query: 223 CSV-EIGYNQKVDVVRIFESRKLFL 246
                I Y Q   + +  +     +
Sbjct: 272 VIFSGIDYLQLPKIEKSLDENGFKI 296


>gi|104780129|ref|YP_606627.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           entomophila L48]
 gi|226712963|sp|Q1IEU2|RSMC_PSEE4 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|95109116|emb|CAK13813.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas entomophila L48]
          Length = 332

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   + +  P  +   +D+   A+  ++    
Sbjct: 177 DKGTALLLEHLDGLPSGHVLDFGCGAGVLGATIKRRYPQSQVTLLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   +  D   +  G  D+I+SNPP+   V  D    E                
Sbjct: 237 ANGLEGQV--ISGDGIDAAPGELDLILSNPPFHTGVHTDYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDG 221
                 +      HL K G
Sbjct: 279 -----NLLKKSGEHLRKGG 292


>gi|125973835|ref|YP_001037745.1| 50S ribosomal protein L11P methyltransferase [Clostridium
           thermocellum ATCC 27405]
 gi|256004287|ref|ZP_05429269.1| ribosomal protein L11 methyltransferase [Clostridium thermocellum
           DSM 2360]
 gi|281417995|ref|ZP_06249015.1| ribosomal protein L11 methyltransferase [Clostridium thermocellum
           JW20]
 gi|166223411|sp|A3DF23|PRMA_CLOTH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|125714060|gb|ABN52552.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Clostridium thermocellum ATCC 27405]
 gi|255991721|gb|EEU01821.1| ribosomal protein L11 methyltransferase [Clostridium thermocellum
           DSM 2360]
 gi|281409397|gb|EFB39655.1| ribosomal protein L11 methyltransferase [Clostridium thermocellum
           JW20]
 gi|316939969|gb|ADU74003.1| ribosomal protein L11 methyltransferase [Clostridium thermocellum
           DSM 1313]
          Length = 313

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 40/160 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  R++D+G GTG + + +  +    +   VDI   A+++AK N   N V +     + 
Sbjct: 173 KDGCRVIDVGCGTGILSI-IASKLGAAEVTAVDIDEVAVKVAKENLELNKV-DNVRVFKG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 +   D++V+N   I +VI+D                           I+  V  
Sbjct: 231 VLDDIEKEKRDIVVAN--IIANVIMD---------------------------ISSRVPY 261

Query: 216 HLNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVNAF 250
           +L KDGL        E    +K +V+     +    V   
Sbjct: 262 YLKKDGLFIASGIIKE----RKQEVLDECLRKGFECVEII 297


>gi|310817604|ref|YP_003949962.1| s-adenosyl-l-methionine: l-methionine s-methyltransferase
           [Stigmatella aurantiaca DW4/3-1]
 gi|309390676|gb|ADO68135.1| S-adenosyl-L-methionine: L-methionine S-methyltransferase
           [Stigmatella aurantiaca DW4/3-1]
          Length = 1021

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 77/208 (37%), Gaps = 25/208 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L L    F P       ++  L   L     +   R++++G+G+G +CLAL + +   
Sbjct: 67  LELLLLPSIFAPEAWAHTFLEGLLKVPLDEYAGK---RLVEVGSGSGWICLALARFTRLA 123

Query: 123 KGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
             +GVD++  +  +A  NA  NG   +  R    +SD    V     +D +V   P +  
Sbjct: 124 HVLGVDLNPHSAPLAWCNAWLNGDEALVSRLSFGESDLLRQVPVGEPWDFVVGCIPQVLR 183

Query: 178 VIVDCLGLEVRDFDPRISLDG----------GID--GLSHYRTIADGVSRHLNKDGLCSV 225
                L  EV   D   +L              D  GL     + D     L+ +G   +
Sbjct: 184 GE--GLPAEVSQAD-EQALYDLSNYCAIQNVYEDHFGLGLNARLLDEAPERLSPEGRLLL 240

Query: 226 -EIGYNQKVDVVRIFESRKL-FLVNAFK 251
              G   +  + R+F  R     V   K
Sbjct: 241 NLAGRPGRAIIERMFTRRGFTTWVRVAK 268


>gi|260892856|ref|YP_003238953.1| methyltransferase small [Ammonifex degensii KC4]
 gi|260864997|gb|ACX52103.1| methyltransferase small [Ammonifex degensii KC4]
          Length = 392

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +R+LD    TG   +A  K     + V VD+S +ALE+A+ NAV NGV E+    +++ 
Sbjct: 218 GMRVLDCFCYTGGFAVAAAK-GEAEEVVAVDVSEQALELARENAVLNGVEEKISWREANC 276

Query: 158 FSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F  +         FD+++ +PP   +   + L   +R                 Y+ I  
Sbjct: 277 FDELRRLEKAGEKFDLVILDPPAF-TKSKEALPSAMRG----------------YKEINL 319

Query: 212 GVSRHLNKDGLCS 224
              + L   GL  
Sbjct: 320 RALKLLRPGGLLF 332


>gi|224500801|ref|ZP_03669150.1| hypothetical protein LmonF1_14461 [Listeria monocytogenes Finland
           1988]
 gi|224503751|ref|ZP_03672058.1| hypothetical protein LmonFR_14839 [Listeria monocytogenes FSL
           R2-561]
 gi|254832315|ref|ZP_05236970.1| hypothetical protein Lmon1_13254 [Listeria monocytogenes 10403S]
 gi|255027242|ref|ZP_05299228.1| hypothetical protein LmonocytFSL_14528 [Listeria monocytogenes FSL
           J2-003]
          Length = 257

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPVRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 66  GIIPL-LLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 124

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 125 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 175 GKANFVHRPERLLDIIDIMRKYRL 198


>gi|213583008|ref|ZP_03364834.1| 16S ribosomal RNA m2G1207 methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 262

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 57  WRDF--YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           W ++    + +      F  R      +D      L  +      ++LD+G G G +  A
Sbjct: 159 WAEYNIDGLTIKTLPGVFS-RDG----LDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSAA 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           L   SP  +    D+S  A+E +++    NG+    +   S+ FS V+G F
Sbjct: 214 LASHSPKVRLTLCDVSAPAVEASRATLAANGLEG--EVFASNVFSEVKGRF 262


>gi|323966612|gb|EGB62045.1| methyltransferase small domain-containing protein [Escherichia coli
           M863]
 gi|327251870|gb|EGE63556.1| ribosomal RNA large subunit methyltransferase G [Escherichia coli
           STEC_7v]
          Length = 378

 Score = 69.4 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     ++DLG G G + L LL ++P  K V VD S  A+  +  N  
Sbjct: 214 DIGARFFMQHLPENLEGEVVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSHLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|167042719|gb|ABZ07439.1| hypothetical protein ALOHA_HF4000ANIW133O4ctg2g17 [uncultured
           marine crenarchaeote HF4000_ANIW133O4]
          Length = 180

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 29/156 (18%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++++ P  +T  L D         I+       LD+GTG+G   LA L E  F   VG D
Sbjct: 8   AESYPPSEDTFFLAD--------YIKNEKGESALDIGTGSGY--LAALLEKSFSLVVGTD 57

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S         N +        +T+  +   ++   FD+++ N PY+++  +  +     
Sbjct: 58  LS--------FNVLKKQKYFTTNTVCCNGADALNQQFDLVICNMPYLKTDEILDIST--- 106

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                   DGG DGL     I       +   G   
Sbjct: 107 --------DGGRDGLEVPMKIIGSAKSRIKSGGKFI 134


>gi|304321920|ref|YP_003855563.1| 50S ribosomal protein L11 methyltransferase [Parvularcula
           bermudensis HTCC2503]
 gi|303300822|gb|ADM10421.1| ribosomal protein L11 methyltransferase, putative [Parvularcula
           bermudensis HTCC2503]
          Length = 297

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +L  + K +  R+LDLGTG+G + +A  +  P  + V  DI   ++ IA  NA  N    
Sbjct: 144 ALTALAKGEPRRLLDLGTGSGVLAIAARRLFPEARIVATDIDAPSVAIAAENAALNKAPG 203

Query: 149 RFDTLQSDWFSSV--EGLFDVIVSN 171
                 +     V  EG FD+I++N
Sbjct: 204 IVFLEATGVPQEVAEEGPFDIILAN 228


>gi|294979860|pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
 gi|294979861|pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From
           Methanosarcina Mazei
          Length = 276

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 32/138 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++L+ G G GA  + L K +P  +   +DIS ++LE A+ N   NG+      LQ+
Sbjct: 36  PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQA 94

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGV 213
           + FS             P+ +S         V +    P  +L                +
Sbjct: 95  NIFS------------LPFEDSSFDHIFVCFVLEHLQSPEEAL--------------KSL 128

Query: 214 SRHLNKDGLC-SVE--IG 228
            + L   G    +E   G
Sbjct: 129 KKVLKPGGTITVIEGDHG 146


>gi|261253767|ref|ZP_05946340.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
 gi|260937158|gb|EEX93147.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
          Length = 376

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 77/197 (39%), Gaps = 35/197 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           N+ L    + +     +   +D    F +  +     ++ +LDLG G G + + + + +P
Sbjct: 199 NIELNNLPNVY-----SGESLDLGARFMIQHLPTNPNLKHVLDLGCGNGVLSVKMGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
             K   VD S  A+E A+ N + N   +R  + + ++   ++E    D+I+ NPP+ +  
Sbjct: 254 AIKLTCVDESFMAVESARQNLIQNLGDDREIECIANNCLENLEQNDVDMIMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L   G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQILRVGGQLLVIGNRHLGYD--GK 350

Query: 235 VVRIFESRKLFLVNAFK 251
           + R+F    + +V A K
Sbjct: 351 LARLFGKSNVKVVAANK 367


>gi|21228051|ref|NP_633973.1| methyltransferase [Methanosarcina mazei Go1]
 gi|20906485|gb|AAM31645.1| methyltransferase [Methanosarcina mazei Go1]
          Length = 266

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 32/138 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++L+ G G GA  + L K +P  +   +DIS ++LE A+ N   NG+      LQ+
Sbjct: 34  PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQA 92

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGV 213
           + FS             P+ +S         V +    P  +L                +
Sbjct: 93  NIFS------------LPFEDSSFDHIFVCFVLEHLQSPEEAL--------------KSL 126

Query: 214 SRHLNKDGLC-SVE--IG 228
            + L   G    +E   G
Sbjct: 127 KKVLKPGGTITVIEGDHG 144


>gi|254229510|ref|ZP_04922924.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio sp. Ex25]
 gi|262393478|ref|YP_003285332.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. Ex25]
 gi|151937975|gb|EDN56819.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio sp. Ex25]
 gi|262337072|gb|ACY50867.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. Ex25]
          Length = 384

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L    + +     +   +D    F L  + +  +V  ++DLG G G + +   + +P
Sbjct: 199 DIELKNMPNVY-----SGESLDLGARFMLQHLPQDPLVDNVIDLGCGNGVLSVKFGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             +   VD S  ALE AK N + N   +R    + ++     +     +I+ NPP+ +  
Sbjct: 254 NARLTCVDESFMALESAKQNLLDNLGEDRDIQCVANNCLDGFKHNSCSMIMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L++ G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQVLSEGGKLLVIGNRHLGYD--AK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + L+
Sbjct: 351 LKRLFGDKNVKLI 363


>gi|22536943|ref|NP_687794.1| hypothetical protein SAG0779 [Streptococcus agalactiae 2603V/R]
 gi|25010854|ref|NP_735249.1| hypothetical protein gbs0799 [Streptococcus agalactiae NEM316]
 gi|76799326|ref|ZP_00781489.1| methyltransferase [Streptococcus agalactiae 18RS21]
 gi|77411326|ref|ZP_00787674.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
 gi|22533796|gb|AAM99666.1|AE014227_10 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|23095233|emb|CAD46443.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76585316|gb|EAO61911.1| methyltransferase [Streptococcus agalactiae 18RS21]
 gi|77162586|gb|EAO73549.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
          Length = 254

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P++  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + +++     ++AK +   N + ++   +  D  + ++ +     D+++ NPPY ++
Sbjct: 70  ATIIEIELQESLADMAKRSIKLNKLEKQVTMINDDLKNLLDHVQRSNVDLMLCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L          R I       L   G  ++    ++ +
Sbjct: 130 SETSKKNLSPHYLLARHEITTNL----------REICQIAQHALKTKGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++       L
Sbjct: 180 EIIDTMRQFNL 190


>gi|329121039|ref|ZP_08249670.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM
           19965]
 gi|327471201|gb|EGF16655.1| SAM-dependent methyltransferase [Dialister micraerophilus DSM
           19965]
          Length = 246

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L      I+ +D  +I DLGTGTG + L LL           +I+    +IAK N 
Sbjct: 33  IDSVLLAHYVSIKNKD--KIADLGTGTGIIPL-LLSALGAKDIAAFEINPIMADIAKRNV 89

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEV---RDFDPRI 194
             N  ++    L+ D+    E    G F  +V+NPPY +         E      ++   
Sbjct: 90  SGNKKNDIIKVLECDYKKIKEYYPTGSFTSVVANPPYRDIKTGKISNKEAVATACYEIN- 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    +    +       L   G  ++  
Sbjct: 149 ---------ATIEDVFKTAQYLLKYGGRLTMVH 172


>gi|163750777|ref|ZP_02158012.1| hypothetical protein KT99_21204 [Shewanella benthica KT99]
 gi|161329472|gb|EDQ00466.1| hypothetical protein KT99_21204 [Shewanella benthica KT99]
          Length = 421

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K +   I+DLG G G + L   +  P      +D S  A+E A+ N  
Sbjct: 218 DIGAHIMLDNMPKGEFTSIIDLGCGNGVLGLHAKQVFPKAYIHFIDDSEMAVESARQNWA 277

Query: 143 TNGVS------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +       E+      D  + +      D+I+ NPP+ +   +             I
Sbjct: 278 LNNLDTEGLVGEQATFGWDDCLTHLNEGVRPDLILCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLQSWRALKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|228987563|ref|ZP_04147681.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229198440|ref|ZP_04325144.1| Ribosomal protein L11 methyltransferase [Bacillus cereus m1293]
 gi|228584943|gb|EEK43057.1| Ribosomal protein L11 methyltransferase [Bacillus cereus m1293]
 gi|228772161|gb|EEM20609.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 312

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVTVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|90961485|ref|YP_535401.1| methyltransferase [Lactobacillus salivarius UCC118]
 gi|227890575|ref|ZP_04008380.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
 gi|301299660|ref|ZP_07205916.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|90820679|gb|ABD99318.1| Methyltransferase [Lactobacillus salivarius UCC118]
 gi|227867513|gb|EEJ74934.1| methyltransferase [Lactobacillus salivarius ATCC 11741]
 gi|300852728|gb|EFK80356.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 252

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 80/190 (42%), Gaps = 27/190 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  SS+ F    +  LL D A         K+   +I+DL  G GAV L L ++    
Sbjct: 20  IKIIQSSEVFSFSIDAVLLADFA------DSLKKKNSKIVDLCAGNGAVGLFLSQKV-NG 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           K + V+I  +  ++A+ + + N + ++   L  D  ++++GL      D++V NPPY  +
Sbjct: 73  KIIQVEIQKRLADMARRSILLNNLEDKITILNEDL-NNLQGLISKDSVDMVVCNPPYFAN 131

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +            +   + +++L            + +  S  L   G  +     ++ +
Sbjct: 132 LETSKKNPNQYYAIARHEIKVTL----------EQVIEVTSGLLKFGGKANFVYRPDRLL 181

Query: 234 DVVRIFESRK 243
           +++ +     
Sbjct: 182 EMLDLMRKHN 191


>gi|78043617|ref|YP_358926.1| hypothetical protein CHY_0054 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995732|gb|ABB14631.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 249

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESP 120
            +++  +   F         +DS L     +    D  R++DLGTG G V L L  +   
Sbjct: 20  GLKIYQNPALFCFA------IDSVLLAWFTKTAPND--RVVDLGTGNGVVPLLLYGRNRE 71

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIES 177
             K  G++I  K  ++A  +   N + E+ + +  D   +   +   FDV+ +NPPY + 
Sbjct: 72  IGKIYGIEIQEKLYQLAVKSVALNNLEEKIEIILGDLKDAPAILGKGFDVVTANPPYRKK 131

Query: 178 VIVDCLG-LE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    E  V   +   +L            +    ++ L   G   +  
Sbjct: 132 GEGRLNPVPEVAVARHELLTTL----------EDVVATAAKLLKPRGSFYLVH 174


>gi|327458943|gb|EGF05291.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1057]
          Length = 189

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      +EG FD I                             GG  G
Sbjct: 76  HFGC-HNVRLHQGLAPIELEGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  ++ +   G   +  I     ++  +I E      +   
Sbjct: 108 --NMQEIFDWCAQLMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|52078529|ref|YP_077320.1| hypothetical protein BL00537 [Bacillus licheniformis ATCC 14580]
 gi|52783891|ref|YP_089720.1| YabB [Bacillus licheniformis ATCC 14580]
 gi|52001740|gb|AAU21682.1| conserved hypothetical protein containing SAM (and some other
           nucleotide) binding motif YabB [Bacillus licheniformis
           ATCC 14580]
 gi|52346393|gb|AAU39027.1| YabB [Bacillus licheniformis ATCC 14580]
          Length = 247

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 74/208 (35%), Gaps = 33/208 (15%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      ++++  S   F    +  LL       S           I+DL TG 
Sbjct: 8   ERLDYLLAE----DMKIVQSPTVFAFSLDAVLL-------SKFAYVPIQKGNIIDLCTGN 56

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G V L LL         GV+I  +  ++A  +   N + ++   ++ D  +  +      
Sbjct: 57  GIVPL-LLSTRTKAAITGVEIQERLYDMALRSVEYNNLQKQIHLIRDDLKNMPQVLGYNK 115

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            DV+  NPPY ++       L     +   +   +L            +    S+ L + 
Sbjct: 116 ADVVTCNPPYFKTPQKTEQNLNEHLAIARHEIYCTL----------EDVIRVSSKLLKQG 165

Query: 221 GLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           G  ++     +   ++ IFE  K F + 
Sbjct: 166 GKLALVH---RPGRLLEIFELMKAFQIE 190


>gi|114046474|ref|YP_737024.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. MR-7]
 gi|123326798|sp|Q0HY38|RLMG_SHESR RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|113887916|gb|ABI41967.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sp. MR-7]
          Length = 377

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + + D   I+DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLDNLPQGDFKTIVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWA 277

Query: 143 TNGV-SERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N + +E       D  + +      D+++ NPP+ +   +             I+    
Sbjct: 278 NNQLPAETGHFHWDDCMTHLPDGVEPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKNGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|300214333|gb|ADJ78749.1| Methyltransferase [Lactobacillus salivarius CECT 5713]
          Length = 252

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 80/190 (42%), Gaps = 27/190 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  SS+ F    +  LL D A         K+   +I+DL  G GAV L L ++    
Sbjct: 20  IKIIQSSEVFSFSIDAILLADFA------DSLKKKNSKIVDLCAGNGAVGLFLSQKV-NG 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIES 177
           K + V+I  +  ++A+ + + N + ++   L  D  ++++GL      D++V NPPY  +
Sbjct: 73  KIIQVEIQKRLADMARRSILLNNLEDKITILNEDL-NNLQGLISKDSVDMVVCNPPYFAN 131

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           +            +   + +++L            + +  S  L   G  +     ++ +
Sbjct: 132 LETSKKNPNQYYAIARHEIKVTL----------EQVIEVTSGLLKFGGKANFVYRPDRLL 181

Query: 234 DVVRIFESRK 243
           +++ +     
Sbjct: 182 EMLDLMRKHN 191


>gi|288942500|ref|YP_003444740.1| methyltransferase small [Allochromatium vinosum DSM 180]
 gi|288897872|gb|ADC63708.1| methyltransferase small [Allochromatium vinosum DSM 180]
          Length = 196

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L   Q   L   I  S +       LG R    +    +   F PR      +D      
Sbjct: 2   LTPEQLAGLRRDIQFSAQ-------LGGR---TLEFRSTWGLFSPRE-----IDEGTRLL 46

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +        LDLG G G + L L   +P  + + VD    A++ A  NA  N + + 
Sbjct: 47  LDHLHIEPGDDCLDLGCGYGPIGLTLAALAPLGRTLLVDKDFVAVDYANRNARLNRL-DN 105

Query: 150 FDTLQSDWFSSVEG--LFDVIVSNPP 173
            +   S+ F  +E    FD+I SN P
Sbjct: 106 AEARLSNGFDQIEPERRFDLIASNVP 131


>gi|240139856|ref|YP_002964333.1| putative methyltransferase small [Methylobacterium extorquens AM1]
 gi|254562275|ref|YP_003069370.1| methyltransferase small [Methylobacterium extorquens DM4]
 gi|240009830|gb|ACS41056.1| putative methyltransferase small [Methylobacterium extorquens AM1]
 gi|254269553|emb|CAX25519.1| putative methyltransferase small [Methylobacterium extorquens DM4]
          Length = 250

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 63/177 (35%), Gaps = 21/177 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L      PR       D+ L   L  +       + DLG  TGAV LA+ + +
Sbjct: 8   FLGGRLRLRQP---PRGAHRAGTDAVLLARL--LAPAPGATLYDLGAATGAVGLAVARLT 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---------VEGLFDVIVS 170
              + V V+     + +A+ NA  NG+  R   +++D  +               D++++
Sbjct: 63  EVGRVVLVERDPDLVALARENAAANGLDGRVAVIEADLLAPGVQRRAAGLEPDSADIVLT 122

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           NPP+ E          V       +   G  GL  +       +  L   G   +  
Sbjct: 123 NPPFFEEG--AHRPSPVPQKASAHTFAAG--GLDLW---LRTCADLLRPGGRLGLIH 172


>gi|150020095|ref|YP_001305449.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
 gi|259534597|sp|A6LJG3|PRMA_THEM4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|149792616|gb|ABR30064.1| ribosomal L11 methyltransferase [Thermosipho melanesiensis BI429]
          Length = 258

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA +L +   R  + +LDLG G+G + + L K+      + VD    A+E A  N   N 
Sbjct: 119 LAATLLKKYLRQGMDVLDLGCGSGILSI-LAKKLGASGVLAVDNDKMAVESAIENVEKNN 177

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V        SD   +V+G +D+IVSN
Sbjct: 178 VEVEIRV--SDLLKNVDGKYDLIVSN 201


>gi|222034813|emb|CAP77556.1| ribosomal RNA small subunit methyltransferase D [Escherichia coli
           LF82]
 gi|312947653|gb|ADR28480.1| putative methyltransferase small domain protein [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 378

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL+++P  K V VD S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLEKNPQAKVVFVDESSMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|15640643|ref|NP_230272.1| hypothetical protein VC0623 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587955|ref|ZP_01677709.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728278|ref|ZP_01681310.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673438|ref|YP_001216116.1| hypothetical protein VC0395_A0151 [Vibrio cholerae O395]
 gi|153818927|ref|ZP_01971594.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822984|ref|ZP_01975651.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080804|ref|YP_002809355.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           M66-2]
 gi|229505754|ref|ZP_04395264.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229509212|ref|ZP_04398697.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229519578|ref|ZP_04409021.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9]
 gi|229608865|ref|YP_002879513.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
 gi|254850856|ref|ZP_05240206.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744159|ref|ZP_05418112.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262155733|ref|ZP_06028857.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
 gi|262169925|ref|ZP_06037615.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|298500740|ref|ZP_07010543.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|81858155|sp|Q9KUA0|RSMC_VIBCH RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712996|sp|A5F942|RSMC_VIBC3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|9655057|gb|AAF93789.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547802|gb|EAX57890.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629472|gb|EAX61899.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126510544|gb|EAZ73138.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519491|gb|EAZ76714.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315321|gb|ABQ19860.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008692|gb|ACP04904.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           M66-2]
 gi|227012448|gb|ACP08658.1| Ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           O395]
 gi|229344267|gb|EEO09242.1| 16S RNA G1207 methylase RsmC [Vibrio cholerae RC9]
 gi|229353784|gb|EEO18720.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229357977|gb|EEO22894.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229371520|gb|ACQ61943.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
 gi|254846561|gb|EET24975.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738099|gb|EET93491.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262021659|gb|EEY40370.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|262030444|gb|EEY49084.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
 gi|297540521|gb|EFH76579.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 340

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 27/167 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+    LT+ S           L    L  +LP +      +++D+G+G G +   + K 
Sbjct: 166 DYQGHELTIRSLPGVFSHGEFDLGSRLLLDTLPPLSG----KVIDIGSGAGVLGCVMAKL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+  ++   V N +        SD FS     ++ IV+NPP+   +
Sbjct: 222 NPHIELEMTDISALAIRSSQETLVANQLHGHV--YPSDMFSDTGHHYNYIVTNPPFHSGL 279

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  E                      +      HL   G   V
Sbjct: 280 ETSYSATE---------------------RLLAESVDHLASGGSIWV 305


>gi|295097604|emb|CBK86694.1| 16S rRNA m(2)G 1207 methyltransferase /23S rRNA m(2)G-1835
           methyltransferase [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 378

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P    V  D S  A+  ++ N  
Sbjct: 214 DIGARFFMEHLPENLEGEIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVE 273

Query: 143 TN--GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ +  NPP+        L   V            
Sbjct: 274 TNLPEALDRCEFMINNALSGVEPFRFNAVFCNPPF---HQKHALTDNV------------ 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L  +G   +
Sbjct: 319 ------AWEMFHHARRCLKINGELYI 338


>gi|117617753|ref|YP_855675.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|229470491|sp|A0KHC4|RLMG_AERHH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|117559160|gb|ABK36108.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 380

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +      +++DLG G G + L+LL      +   +D S  A+  A+ N  
Sbjct: 220 DIGARFMLDNLPIHSARKVIDLGCGNGVLGLSLLARDAEVEVTFIDESHMAVASARLNVE 279

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N  +   R   L ++    V  G  D I+ NPP+ +   +             I+    
Sbjct: 280 HNLPAALPRTHFLVNNCLDGVAVGSVDRILCNPPFHQLQAITD----------HIAW--- 326

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESR 242
                    +     R L K G   + +G         + R+F + 
Sbjct: 327 --------QMFSDAHRVLPKGGELWI-VGNRHLDYHNKLKRLFANA 363


>gi|310643068|ref|YP_003947826.1| ribosomal protein l11 methyltransferase [Paenibacillus polymyxa
           SC2]
 gi|309248018|gb|ADO57585.1| Ribosomal protein L11 methyltransferase [Paenibacillus polymyxa
           SC2]
          Length = 321

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 68/207 (32%), Gaps = 38/207 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--------------DVVRILDLGTG 107
           ++ +  + + +EP  E E +++     +                         ++D+GTG
Sbjct: 126 HLTIKPTWEEYEPASEDEKIIELDPGMAFGTGTHPTTSLCLRTLESVIQGGEEVIDVGTG 185

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +G + +  +K       + +D+   A+  A+ N   NG+ ER    +SD  S +      
Sbjct: 186 SGILAIGAIKLGAK-HVLALDLDPVAVSSARENTRLNGLEERITIKESDLLSVLNA---- 240

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
             S+P     + V  +   +                       D V   L   G   +  
Sbjct: 241 --SDPTLGIQLPVKLVVANILA--------------EIILLFIDDVYNALQPGG-IYIAS 283

Query: 228 GY--NQKVDVVRIFESRKLFLVNAFKD 252
           G   N++  V    ++    +    +D
Sbjct: 284 GIWKNKEEAVETALKAAGFEIAEINRD 310


>gi|133930589|gb|ABO43865.1| ribosomal protein L11 methylase [Lactobacillus reuteri]
          Length = 283

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 51/190 (26%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD--SALAFSLPRIEKRDVVR-------------- 100
           W+ +Y+        T  P+ E     D    L F  P +                     
Sbjct: 117 WQKYYHPLRVTDQLTIVPQWEEYEPADPKEKLIFLDPGMAFGTGTHPTTRLMLEALEKTV 176

Query: 101 -----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D+GTG+G + +A  K     K    DI   A+  AK N   N V++      +
Sbjct: 177 VGNEYVIDVGTGSGVLSIA-AKHLGAGKVDAYDIDEVAVNSAKKNLALNPVAKDVKVGVN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +    D+IV+N                      ++             +      
Sbjct: 236 SLLDGIHTQADLIVAN---------------------MLA--------EIIVPLIPQAYE 266

Query: 216 HLNKDGLCSV 225
           +L  DG   V
Sbjct: 267 NLKPDGKFLV 276


>gi|225026350|ref|ZP_03715542.1| hypothetical protein EUBHAL_00592 [Eubacterium hallii DSM 3353]
 gi|224956360|gb|EEG37569.1| hypothetical protein EUBHAL_00592 [Eubacterium hallii DSM 3353]
          Length = 249

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L     R++K+     +DL +GTG + + +  + P     G++   +  ++A+ + 
Sbjct: 33  IDAVLLSDYARVKKKSKG--IDLCSGTGIIPILMEGKYPLAHVEGLEYQEEFAKMAERSV 90

Query: 142 VTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESV---IVDCLGLEVRDFDPRI 194
             NG  E+   +Q D            FD +  NPPY+              +   +   
Sbjct: 91  KMNGQEEKVHIVQGDVRNIKTDYERESFDWVTCNPPYMTGEHGLTNPDYAKAIARHEITC 150

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           SL            + +     L   G   +  
Sbjct: 151 SL----------EDVVNAAKWLLKTGGHFYMVH 173


>gi|182416667|ref|ZP_02948072.1| SAM-dependent methyltransferase [Clostridium butyricum 5521]
 gi|237666253|ref|ZP_04526240.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379482|gb|EDT76973.1| SAM-dependent methyltransferase [Clostridium butyricum 5521]
 gi|237658343|gb|EEP55896.1| methyltransferase small [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 250

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 19/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L      ++ R   R +DL TGTG V   L  +    + VGV+I    +E+A+ + 
Sbjct: 36  IDAVLLSDFANVKTRH--RAIDLCTGTGIVPFLLYGKYSPQEVVGVEIQSDMVEMAERSV 93

Query: 142 VTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYI--ESVIVDCLGL-EVRDFDPRI 194
             N +  +   +  D          G FDV+  NPPY    S I++ L    +   +   
Sbjct: 94  KLNSLESKVSFINLDLKDIDGLKELGRFDVLTVNPPYKLNNSGIINPLDKLAIARHEIMC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +L            +       L  +G   +     +  D+  +    K
Sbjct: 154 NL----------EDVIYAARVLLKDNGRMFIVHRPERLADIFTLMRKYK 192


>gi|67922523|ref|ZP_00516031.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol
           methylase [Crocosphaera watsonii WH 8501]
 gi|67855607|gb|EAM50858.1| similar to 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol
           methylase [Crocosphaera watsonii WH 8501]
          Length = 401

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 35/188 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--- 140
           +A  F   R  +R+ +RILD G GTG     L+  +P  + VGVDIS KALEIA+     
Sbjct: 41  AAYNFCTGRKPERENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRSQQ 100

Query: 141 ---AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
              A  +     F  L  +    +EG FD+I                + V    P     
Sbjct: 101 SGVATNHNHPISFHHLPLENADQIEGEFDLINC--------------VGVLHHLP----- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGN 256
              D ++  + +    S+ L   G+  + +        +++ +    L       DY   
Sbjct: 142 ---DPMAGIKAL----SKKLAPGGIFHIFVYAELGRWEIQLMQKAISLLQTETKGDY--K 192

Query: 257 DRVLLFCR 264
           D V +  +
Sbjct: 193 DGVFVGRK 200


>gi|317498419|ref|ZP_07956714.1| methyltransferase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316894313|gb|EFV16500.1| methyltransferase domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 262

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 35/178 (19%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCK-ALEIAKSN 140
                +  ++     ++LD+G G  A+ +   K  P  +   +D   +    A E  + N
Sbjct: 78  VHEHLIKHLDWDGEGKLLDIGCGAAALTVHCAKAFPKAQITAMDHWGVEWNYAKEQCEKN 137

Query: 141 AVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A   GV++     + D       +  FD +VSN  +                + R +   
Sbjct: 138 AKIEGVADHIAFQKGDAAKLDFPDETFDAVVSNFVF---------------HEVRTA--- 179

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNAF 250
                   R +     R L K G+ S +  ++QK       + VRI +   +  V+  
Sbjct: 180 -----KDKRDVVKEALRVLKKGGVFSFQDMFSQKALYGDMEEFVRILKEEGISEVHYI 232


>gi|209526553|ref|ZP_03275079.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209493059|gb|EDZ93388.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 289

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/250 (20%), Positives = 89/250 (35%), Gaps = 53/250 (21%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR--ILGWRDFYNVR---------LTLSSD 70
           ++VD ++ +D+  +     ++   L   ++        +DF+ +          LT    
Sbjct: 18  LLVDREA-IDNLDKSIDWESVCDRLTDPNLVYPQYYQTQDFHGIEGGYLNKSAALTYDPI 76

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T    P  E  V      ++  I  +   RILDLG GTG+  L L +  P  + +G+D+S
Sbjct: 77  TQYAIPPNETWVRQ---EAIDTITVKPR-RILDLGCGTGSTTLLLKQTFPNAEVIGLDLS 132

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              L +A++ A   G+  +F        +     F          ES   D +   +   
Sbjct: 133 PYMLAVAETKAKQAGLDIKF----YHGLAEESDRF----------ESQSFDLVSASLLFH 178

Query: 191 D--PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFESRKL 244
           +  P I++            IA    R L   G   +  G+     Q   +  IFE    
Sbjct: 179 ETPPEIAI-----------AIAREAFRLLKAGGEVMILDGHQKILRQNPWLTEIFEEP-- 225

Query: 245 FLVNAFKDYG 254
                 KDY 
Sbjct: 226 ----YLKDYA 231


>gi|188582540|ref|YP_001925985.1| methyltransferase small [Methylobacterium populi BJ001]
 gi|179346038|gb|ACB81450.1| methyltransferase small [Methylobacterium populi BJ001]
          Length = 250

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 70/208 (33%), Gaps = 22/208 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L      PR       D+ L   L  +       + DLG  TGAV LA  + S
Sbjct: 8   FLGGRLRLRQP---PRGAHRAGTDAVLLARL--VVPAPGDTLYDLGASTGAVGLAAARMS 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---------VEGLFDVIVS 170
              + V V+       +A+ NA  NG++ER   + +D  +            G  D++++
Sbjct: 63  EACRVVLVERDPDLAALARENASANGLAERVAVIAADVLAPGAQRRAAGLQAGCADIVLT 122

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP+ E          V       +   G  GL  +       +  L   G   +    +
Sbjct: 123 NPPFFEVG--GHRPSPVPQKASAHAFAAG--GLDLW---LRTCADLLRPGGRLGLIHRAD 175

Query: 231 QKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                +     R          +  +DR
Sbjct: 176 ALPACLDALRGR-FGDCAVRPVHARSDR 202


>gi|126733998|ref|ZP_01749745.1| methyltransferase small [Roseobacter sp. CCS2]
 gi|126716864|gb|EBA13728.1| methyltransferase small [Roseobacter sp. CCS2]
          Length = 251

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   ++      ++PR      VD  +      +  +    +L+LG G G   L L   
Sbjct: 9   DFLGGKIK----VWQPRRGYRAGVDPVI--LAASVPAKSGQTVLELGCGVGVASLCLAAR 62

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
            P     GV++      +A+ N V N +   F+ + +D  S   G     FD ++ NPPY
Sbjct: 63  VPGLHVTGVEVQDVYSTLAQRNGVANDLP--FEVITADLRSLPAGLRQKRFDHVIMNPPY 120

Query: 175 IESV 178
            +  
Sbjct: 121 FDRG 124


>gi|77359508|ref|YP_339083.1| ribosomal RNA small subunit methyltransferase C [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123589605|sp|Q3ILJ2|RSMC_PSEHT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|76874419|emb|CAI85640.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 341

 Score = 69.4 bits (169), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 56/169 (33%), Gaps = 29/169 (17%)

Query: 61  YNVRLTLS------SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           Y+   T+S      +    P       +D      L          +LD G G G +   
Sbjct: 161 YHKPFTVSVADSEFTAISIPGVFNHGNLDVGTKILLENAPLIKQGTVLDFGCGAGLIATY 220

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L  ++P    V  D+S  A+         N +    + L SD  +++ G FD+I+SNPP+
Sbjct: 221 LGLQNPALSFVCSDVSALAIYATTQTLKLNNIKG--EALLSDGLTNITGKFDLIISNPPF 278

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              +  D    E                     T      +HL K G  
Sbjct: 279 HTGIATDYTVAE---------------------TFLANAKQHLTKAGKL 306


>gi|329998042|ref|ZP_08302986.1| ribosomal RNA large subunit methyltransferase G [Klebsiella sp. MS
           92-3]
 gi|328538828|gb|EGF64898.1| ribosomal RNA large subunit methyltransferase G [Klebsiella sp. MS
           92-3]
          Length = 376

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P  + +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNARVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|152972027|ref|YP_001337173.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|229564332|sp|A6TEC2|RLMG_KLEP7 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|150956876|gb|ABR78906.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 376

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P  + +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNARVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|295395415|ref|ZP_06805614.1| methyltransferase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971737|gb|EFG47613.1| methyltransferase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 209

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 29/198 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +V +T  +  F P       +D      L  +       ILDLG G G + L    E+ 
Sbjct: 26  RDVDVTTDAGVFSPSR-----LDPGTTVLLKNLPAPPAGDILDLGCGWGPISLQAGLEAR 80

Query: 121 F----FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 +   +D++ ++L + + NA   G++     L  D   SV   F  I SNPP   
Sbjct: 81  DDDTEVRVWALDVNERSLSLTRENAKAAGLTSVTPVLAQDIPDSV--QFSAIWSNPPI-- 136

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLN---KDGLCSVEIGYNQK 232
            V  D L   +  + PR+   GG   L   + + AD ++  ++                 
Sbjct: 137 RVGKDVLHELLLTWLPRLVP-GGEAWLVVSKNLGADSLATWMSENLPGAW---------- 185

Query: 233 VDVVRIFESRKLFLVNAF 250
            DV R   ++   ++   
Sbjct: 186 -DVRREASAKGFRVLVVR 202


>gi|323353361|ref|ZP_08087894.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis VMC66]
 gi|322121307|gb|EFX93070.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis VMC66]
 gi|324993574|gb|EGC25494.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK405]
 gi|324995114|gb|EGC27026.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK678]
 gi|325693645|gb|EGD35564.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK150]
 gi|325696905|gb|EGD38792.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK160]
 gi|327461847|gb|EGF08178.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1]
 gi|327473583|gb|EGF19003.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK408]
 gi|327489131|gb|EGF20926.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1058]
 gi|332360600|gb|EGJ38410.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1056]
 gi|332363822|gb|EGJ41601.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK355]
          Length = 189

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVI 168
             G        Q      +EG FD I
Sbjct: 76  HFGC-HNVRLHQGLAPIELEGSFDAI 100


>gi|319744777|gb|EFV97117.1| methyltransferase [Streptococcus agalactiae ATCC 13813]
          Length = 254

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P++  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTKTS 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + +++  +  ++AK +   N + ++   +  D  + ++ +     D+++ NPPY ++
Sbjct: 70  ATIIEIELQERLADMAKRSIKLNKLEKQVTMINDDLKNLLDHVQRSNVDLMLCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L          R I       L   G  ++    ++ +
Sbjct: 130 SETSKKNLSPHYLLARHEITTNL----------REICQIAQHALKTKGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++       L
Sbjct: 180 EIIDTMRQFNL 190


>gi|127513814|ref|YP_001095011.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella loihica PV-4]
 gi|229470403|sp|A3QH04|RLMG_SHELP RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|126639109|gb|ABO24752.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella loihica PV-4]
          Length = 401

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + +     I+DLG G G + L   +  P  +   VD S  A+  A+ N  
Sbjct: 218 DIGARIMLDNLPEGHFDTIVDLGCGNGILGLRAKQCYPNAEVHFVDDSEMAITSARQNWQ 277

Query: 143 TNGVSE------RFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  + +  E   D+++ NPP+ +   +             I
Sbjct: 278 ANKLDNPEQAKPQGHFHWDDCLTHLGDEVKPDLVLCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +       L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLDAFHQLRPGGMLQV-VGNRHLGYHVKLKRIFKNC 366


>gi|77409646|ref|ZP_00786318.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
 gi|77171746|gb|EAO74943.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
          Length = 254

 Score = 69.4 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 73/191 (38%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P++  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTKTS 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + +++  +  ++AK +   N + ++   +  D  + ++ +     D+++ NPPY ++
Sbjct: 70  ATIIEIELQERLADMAKRSIKLNKLEKQVTMINDDLKNLLDHVQRSNVDLMLCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L          R I       L   G  ++    ++ +
Sbjct: 130 SETSKKNLSPHYLLARHEITTNL----------REICQIAQHALKTKGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++       L
Sbjct: 180 EIIDTMRQFNL 190


>gi|323492022|ref|ZP_08097187.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
 gi|323313751|gb|EGA66850.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
          Length = 340

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 35/166 (21%)

Query: 63  VRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +      F   E    ++LL+D     +LP ++     ++LD G G G +   +   +
Sbjct: 172 LTIKSLPGVFSHGEFDIGSKLLLD-----TLPELKG----KVLDFGCGAGVIGSVMALLN 222

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
           P  +    DIS  A+  +++    NG++ R     SD +S     +D I+SNPP+   + 
Sbjct: 223 PTIELEMCDISALAVASSQATLAANGLTGRVFA--SDVYSDTSKDYDYIISNPPFHAGLD 280

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 E                     T+     ++ N  G   +
Sbjct: 281 TSYSATE---------------------TLLAKAPQYQNSQGQLFI 305


>gi|99078711|ref|YP_611969.1| methyltransferase small [Ruegeria sp. TM1040]
 gi|99035849|gb|ABF62707.1| methyltransferase small [Ruegeria sp. TM1040]
          Length = 262

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +P+      VD  L  +    +  D   +L+LG G G   L L         VGV++  
Sbjct: 25  LQPKSGYRAGVDPVLLAAAVNAKSGD--SVLELGCGAGQAFLCLAARVSGLSIVGVELQP 82

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
              E+A+ NA  N V             +   +  F  +++NPPY  +        + +D
Sbjct: 83  AYAELARRNAAVNAVPAEVVVADLSNLPATLRQRRFSHVIANPPYYRAGA----HSQAKD 138

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              R +L G    L  +    D  +R L   G  
Sbjct: 139 PGRRTAL-GEGTPLELW---FDVAARRLTPKGYL 168


>gi|91216933|ref|ZP_01253896.1| hypothetical protein P700755_10750 [Psychroflexus torquis ATCC
           700755]
 gi|91184804|gb|EAS71184.1| hypothetical protein P700755_10750 [Psychroflexus torquis ATCC
           700755]
          Length = 233

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 16/169 (9%)

Query: 62  NVRLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            + + +  + F P    ++    ++ +            + +L++GTGTG   + +    
Sbjct: 29  GLEIQVDPNVFSPIYFEDSYFFAENMIDI--------KGLDVLEIGTGTGYFAIKMALNK 80

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPP--YIE 176
              K V  D+S  A   A  N     + ++ D      F   +   FDVI  N P  YIE
Sbjct: 81  AN-KVVATDVSKSAYNNALVNMEKLSLEDKVDIRLGSIFEPILNEKFDVIFWNIPFCYIE 139

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +   +  +  +   ++          +   +   + LNK+G   +
Sbjct: 140 ESTKNDSHISGKLDELESAVFNSE--YKLLQQYLNEGFKFLNKNGKLLL 186


>gi|332981299|ref|YP_004462740.1| ribosomal protein L11 methyltransferase [Mahella australiensis 50-1
           BON]
 gi|332698977|gb|AEE95918.1| ribosomal protein L11 methyltransferase [Mahella australiensis 50-1
           BON]
          Length = 312

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 18/148 (12%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEKRD 97
                 R   ++ +  + +++ P  + +++V+              + L   L       
Sbjct: 118 QYYKPTRVGVHIVIKPTWESYMPAGD-DIVVELDPGMAFGTGTHESTMLCLELLESHMMA 176

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I+D+G G+G + +A  K     K + +D+   A+ +A  NA  N V +  +  ++D 
Sbjct: 177 DSSIIDVGCGSGVLSIAAAKLGAK-KVLALDVDPVAVRVASENAKLNCVEDIVEVRKNDL 235

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGL 185
              ++   D+I++N   +  VI+  L  
Sbjct: 236 LDGLDVQADIIIAN--IVADVIIRLLPQ 261


>gi|332534744|ref|ZP_08410572.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035831|gb|EGI72315.1| putative O-methyltransferase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 232

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 53/156 (33%), Gaps = 11/156 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    +LD+GTGTG + L   + S       V+I   A   A  N   +       
Sbjct: 30  WANLSGAKSLLDIGTGTGLLALMCKQRSNELDITAVEIDESAYTQALQNVANSPWPTISI 89

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             Q+    S E  FDV++SNPPY    +  D                   DGLS    + 
Sbjct: 90  KHQTIQSFSSEVKFDVVISNPPYFNHSLKGDNAARNTARH---------TDGLSF-EELI 139

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           +   R  +     S+ +   +    + +     L+L
Sbjct: 140 NAFKRLSHSGSRFSLILPSVEGALFIELATQNGLYL 175


>gi|324990215|gb|EGC22153.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK353]
          Length = 189

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      +EG FD I                             GG  G
Sbjct: 76  HFGC-HNVRLYQGLAPIELEGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  ++ +   G   +  I     ++  +I E      +   
Sbjct: 108 --NMQEIFDWCAQLMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|206900806|ref|YP_002250671.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
           H-6-12]
 gi|226710073|sp|B5YDR3|PRMA_DICT6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|206739909|gb|ACI18967.1| ribosomal protein L11 methyltransferase [Dictyoglomus thermophilum
           H-6-12]
          Length = 301

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 6/94 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ + +LD+GTG+G + + + K+    K  G+DI  KA+E+AK NA  N V    +  Q+
Sbjct: 164 KEGMDVLDVGTGSGILSI-VAKKLGAGKVKGIDIDKKAVEVAKENAKRNNVE--LEFQQA 220

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +    +E  +D++V+N   + + I+  L  EV+ 
Sbjct: 221 NLTIGIEDKYDIVVAN---LIAEIILKLNSEVKR 251


>gi|163868701|ref|YP_001609913.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP
           105476]
 gi|161018360|emb|CAK01918.1| ribosomal protein L11 methyltransferase [Bartonella tribocorum CIP
           105476]
          Length = 289

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      I+  +    LDLGTG+G + +A+ K  P    +  DI   A+++A+ N   NG
Sbjct: 139 LEMIAKVIKHENPQNALDLGTGSGVLAIAIAKLKPIA-ILATDIDPIAIKVAQHNMALNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V +    + +  F+  E      FD+I++N   I +  +  L  E+              
Sbjct: 198 VEKYITAITATGFTHNEITSRAPFDLIIAN---ILANPLIELAPEMV------------- 241

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                        + L K G   +  I   Q   V+  +  + L  +  +
Sbjct: 242 -------------QVLQKGGSLILSGILEEQHDLVLEAYVKQGLKYLETY 278


>gi|260775445|ref|ZP_05884342.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260608626|gb|EEX34791.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 357

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 35/168 (20%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + + +      F   +    ++LL+D     +LP +      ++LD G G G +   +  
Sbjct: 187 HELTIKSLPGVFSHGQFDIGSQLLLD-----TLPALSG----KVLDFGCGAGVIGSVMAT 237

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +   K    DIS  A+E +K+    NG+  R     SD +S     +  I+SNPP+   
Sbjct: 238 LNAEIKLEMCDISALAVESSKATLEANGLKGRVFA--SDIYSDTSQDYQFIISNPPFHAG 295

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +       E                     T+     +H    G   +
Sbjct: 296 LDTSYSATE---------------------TLLAEAPKHQRSGGQLLI 322


>gi|300724436|ref|YP_003713756.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061]
 gi|297630973|emb|CBJ91653.1| 16S RNA m2G1207 methylase [Xenorhabdus nematophila ATCC 19061]
          Length = 337

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 23/135 (17%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L   +      +LD+  G+G +   L K++P       D++  A+  +K+    N +  
Sbjct: 188 LLSTFDAPISGSLLDIACGSGVLATVLGKKNPDLALTLSDVNAAAITSSKATLKANKLEG 247

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               + S+ +S++E  F+ IVSNPP+ + +              + +L    D       
Sbjct: 248 --SVVTSNVYSAIEEKFNWIVSNPPFHDGL--------------KTNLTAADD------- 284

Query: 209 IADGVSRHLNKDGLC 223
           +      +L   G  
Sbjct: 285 MIRMAPNYLKSGGKL 299


>gi|187934189|ref|YP_001887561.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722342|gb|ACD23563.1| SAM-dependent methyltransferase [Clostridium botulinum B str.
           Eklund 17B]
          Length = 250

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 19/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +      ++ +   R++DL TGTG +   L  +    +  G++I  + + +A+ + 
Sbjct: 36  VDAVILSDFANVKNK--YRVIDLCTGTGIIPFLLYGKYNPKEVYGLEIQEEMVNMAEKSV 93

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + ++   ++ D     +      FDV+  NPPY      +I     L +   +   
Sbjct: 94  KLNALEDKITFIKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPSDKLAIARHEVLC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +L            +       L  +G   +     +  D+  +    K
Sbjct: 154 NL----------EDVIYASKVLLKDNGRMFIVHRPERLADIFTLMRKYK 192


>gi|325690372|gb|EGD32376.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK115]
 gi|332365729|gb|EGJ43487.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1059]
          Length = 189

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVI 168
             G        Q      +EG FD I
Sbjct: 76  HFGC-HNVRLHQGLAPIELEGSFDAI 100


>gi|317061177|ref|ZP_07925662.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12]
 gi|313686853|gb|EFS23688.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. D12]
          Length = 222

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 21/202 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP 120
            V      + F    +  LL D  + F+  + +       L++GTG G + + L +    
Sbjct: 13  GVGFYQEKEGFRFGHDAILLADFIVEFAKAQQKN------LEIGTGNGILPILLSQRGFV 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDI    +++AK NA  NGVS RF       FS     +  I +NPPY++    
Sbjct: 67  SKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFSEKNA-YTQIFANPPYMKRDGK 125

Query: 181 DC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                    V   +  ++L                V + L   G   +    ++  ++  
Sbjct: 126 LQNINSNKAVARHEICLTL----------EEFVRSVKKILAPIGALYMVYRSHRLQELFE 175

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
            F     ++      Y  N RV
Sbjct: 176 NFIKYGFYVSKIQFVYHQNGRV 197


>gi|257463625|ref|ZP_05628016.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           D12]
          Length = 221

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 72/202 (35%), Gaps = 21/202 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SP 120
            V      + F    +  LL D  + F+  + +       L++GTG G + + L +    
Sbjct: 12  GVGFYQEKEGFRFGHDAILLADFIVEFAKAQQKN------LEIGTGNGILPILLSQRGFV 65

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   VDI    +++AK NA  NGVS RF       FS     +  I +NPPY++    
Sbjct: 66  SKEYCAVDILESNIDLAKQNAENNGVSARFVCQDIRNFSEKNA-YTQIFANPPYMKRDGK 124

Query: 181 DC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                    V   +  ++L                V + L   G   +    ++  ++  
Sbjct: 125 LQNINSNKAVARHEICLTL----------EEFVRSVKKILAPIGALYMVYRSHRLQELFE 174

Query: 238 IFESRKLFLVNAFKDYGGNDRV 259
            F     ++      Y  N RV
Sbjct: 175 NFIKYGFYVSKIQFVYHQNGRV 196


>gi|28899127|ref|NP_798732.1| putative methyltransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836803|ref|ZP_01989470.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
 gi|260364748|ref|ZP_05777335.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus K5030]
 gi|260876789|ref|ZP_05889144.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus AN-5034]
 gi|260896833|ref|ZP_05905329.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus Peru-466]
 gi|260900351|ref|ZP_05908746.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus AQ4037]
 gi|81727093|sp|Q87MA4|RLMG_VIBPA RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|28807351|dbj|BAC60616.1| putative methyltransferase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149749949|gb|EDM60694.1| putative ribosomal RNA small subunit methyltransferase D (rRNA
           (guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
 gi|308089013|gb|EFO38708.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus Peru-466]
 gi|308091501|gb|EFO41196.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus AN-5034]
 gi|308108620|gb|EFO46160.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus AQ4037]
 gi|308115333|gb|EFO52873.1| ribosomal RNA large subunit methyltransferase G [Vibrio
           parahaemolyticus K5030]
          Length = 385

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 36/202 (17%)

Query: 54  ILGW-RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAV 111
           I  W  +  +++L    + +     +   +D    F L  I +   +  I+DLG G G +
Sbjct: 190 ITAWDVEGEHIQLKNLPNVY-----SGESLDLGARFMLQHIPQDASINHIIDLGCGNGVL 244

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIV 169
            +   + +P  +   VD S  ALE AK N + N    R    + ++     +    D+I+
Sbjct: 245 SVKAGQLNPNVRLTCVDESFMALESAKQNLLDNLGEGRDIQCVANNCLDGFKPDSCDLIM 304

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE--- 226
            NPP+ +   +             I+             +     + LN++G   V    
Sbjct: 305 CNPPFHQQHAITD----------HIAW-----------QMFCDAKQILNQNGKLLVIGNR 343

Query: 227 -IGYNQKVDVVRIFESRKLFLV 247
            +GY+    + R+F  + + L+
Sbjct: 344 HLGYD--AKLKRLFGDKNVKLI 363


>gi|327469209|gb|EGF14681.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK330]
          Length = 189

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 58/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      +EG FD I                             GG  G
Sbjct: 76  HFGC-HNVRLYQGLAPIELEGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  +  +   G   +  I     ++  +I E      +   
Sbjct: 108 --NMQEIFDWCAELMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|125717334|ref|YP_001034467.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK36]
 gi|125497251|gb|ABN43917.1| Precorrin-6B methylase 2,putative [Streptococcus sanguinis SK36]
          Length = 189

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 31/169 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G        Q      +EG FD I                             GG  G
Sbjct: 76  HFGCQ-NVRLHQGLAPIELEGSFDAI---------------------------FVGGTGG 107

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
             + + I D  ++ +   G   +  I     ++  +I E      +   
Sbjct: 108 --NMQEIFDWCAQLMEPGGRLVLNFILLENALEAAQIAEQMDWEDLEIV 154


>gi|315125937|ref|YP_004067940.1| ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas
           sp. SM9913]
 gi|315014451|gb|ADT67789.1| ribosomal RNA small subunit methyltransferase D [Pseudoalteromonas
           sp. SM9913]
          Length = 382

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
                   T+S+       ++  +        LP+  K     I+DLG G G V L  L 
Sbjct: 195 WPLEGTDFTISNHANVFSRDSLDIGARFFFNYLPQTNK--AKNIIDLGCGNGVVGLMTLA 252

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVE-GLFDVIVSNPPY 174
             P      VD S  A+E A+ N   N     E+   +++D  +  E    D+++ NPP+
Sbjct: 253 RCPNAHISFVDESYMAVESARLNIELNMEDKFEQCTFIENDCLTDFERESADIVLCNPPF 312

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            ++         V D                   +       L + G   + IG   
Sbjct: 313 HQA-------QAVTDH--------------IAWQMFKQAKDTLKEGGELRI-IGNRH 347


>gi|270004358|gb|EFA00806.1| hypothetical protein TcasGA2_TC003693 [Tribolium castaneum]
          Length = 734

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 17/202 (8%)

Query: 58  RDFYNVRL----TLSSDT-FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R +++ R             +      +  +        R +      I+D   G G   
Sbjct: 533 RKYWHRRFQLFSKFDEGVKLDEESWYSVTPEQIAKHLAQRCKCD---LIVDGFCGAGGNA 589

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
           +         + + +DI  K +E+A++NA   GV+++ D +  D+F    GL  DV+  +
Sbjct: 590 IQFA--FTCKRVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGLMADVVFFS 647

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSV-EIG 228
           PP+      + +   V D +  +        L   R I   ++  L  N +    + E  
Sbjct: 648 PPWGGPAYKNEV---VYDLESMLLPVPISKLLEVGRVITSNIAVFLPKNSNAFLLIDETA 704

Query: 229 YNQKVDVVRIFESRKLFLVNAF 250
               V++ + F  + L  + A+
Sbjct: 705 PGGGVEIEQNFMKKNLVSITAY 726


>gi|189235563|ref|XP_969535.2| PREDICTED: similar to prip interacting protein, pimt [Tribolium
           castaneum]
          Length = 797

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 17/202 (8%)

Query: 58  RDFYNVRL----TLSSDT-FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R +++ R             +      +  +        R +      I+D   G G   
Sbjct: 596 RKYWHRRFQLFSKFDEGVKLDEESWYSVTPEQIAKHLAQRCKCD---LIVDGFCGAGGNA 652

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSN 171
           +         + + +DI  K +E+A++NA   GV+++ D +  D+F    GL  DV+  +
Sbjct: 653 IQFA--FTCKRVIAIDIDPKKIELARNNAEVYGVADKIDFIVGDFFHLAPGLMADVVFFS 710

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL--NKDGLCSV-EIG 228
           PP+      + +   V D +  +        L   R I   ++  L  N +    + E  
Sbjct: 711 PPWGGPAYKNEV---VYDLESMLLPVPISKLLEVGRVITSNIAVFLPKNSNAFLLIDETA 767

Query: 229 YNQKVDVVRIFESRKLFLVNAF 250
               V++ + F  + L  + A+
Sbjct: 768 PGGGVEIEQNFMKKNLVSITAY 789


>gi|309789884|ref|ZP_07684462.1| Ribosomal RNA small subunit methyltransferase C [Oscillochloris
           trichoides DG6]
 gi|308228091|gb|EFO81741.1| Ribosomal RNA small subunit methyltransferase C [Oscillochloris
           trichoides DG6]
          Length = 390

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 25/153 (16%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   +   +D      L  +      R+LD+G G G + L        +    VD++  A
Sbjct: 227 PGVFSYEHLDPGTDLLLRNVALPPGGRVLDVGCGYGPIGLTAAAAGAAW-VDMVDVNMLA 285

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +  A+SNA    +    + + ++   ++ G  +DVI+SNPP+     VD           
Sbjct: 286 VAAARSNAQRYYLKG--EVIAANGLETLAGRTYDVIISNPPFHSGSKVDT---------- 333

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S   T+     R L   G  ++
Sbjct: 334 -----------SATATMFAQSRRLLQPGGRLAL 355



 Score = 52.0 bits (124), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 44/149 (29%), Gaps = 34/149 (22%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R E   L    LA +          RIL LG   GA+ + L + +   + +  D +  AL
Sbjct: 34  RNEVMALCAGVLAPAADE-------RILVLGCNHGALGVMLARYACKGQVILSDPNLIAL 86

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           + A+     N ++     +++     + G  D ++   P                     
Sbjct: 87  QAAQRTLEINHIANAVVNVETSLLPGLAGQLDRVIILAP------------------QSR 128

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +L          R         L   G  
Sbjct: 129 ALA---------RRWLVEALALLRPGGTL 148


>gi|90413137|ref|ZP_01221133.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           3TCK]
 gi|90325828|gb|EAS42280.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           3TCK]
          Length = 339

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 37/169 (21%)

Query: 62  NVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            V LT+      F   E    ++LL+      +LP +      ++LD G G G +   + 
Sbjct: 168 GVELTVRSLPGVFSHGEFDNGSKLLI-----NTLPSLRG----KVLDFGCGAGVLGAIMK 218

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + P  +    DIS  A+E AK     N +  +F    +D +S +EG ++ ++SNPP+  
Sbjct: 219 AKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYSELEGPYNYLISNPPFHA 276

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     ++ F             +           +L  DG   +
Sbjct: 277 G---------LKTF------------YAATENFIAQAPNYLFSDGQLII 304


>gi|77359469|ref|YP_339044.1| SAM-dependent methyltransferase(yfiC) [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123587949|sp|Q3IG80|TRMN6_PSEHT RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|76874380|emb|CAI85601.1| conserved protein of unknown function ; putative SAM-dependent
           methyltransferase(yfiC) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 232

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 13/157 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   +LD+GTGTG + L   + SP      V++   A + A  N   +       
Sbjct: 30  WANLSNANSLLDIGTGTGLLALMCKQRSPQLTITAVEVDKNAYQQALQNIAASPWPNIEV 89

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             QS    +    FDV+++NPPY    +  +     +             DGLS    I 
Sbjct: 90  HQQSIQTFNSAQPFDVVIANPPYFNHSLKGNNKARNIARH---------TDGLSFAELI- 139

Query: 211 DGVSRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFL 246
               + L+  G   S+ +   +    + +     LFL
Sbjct: 140 -SAFKKLSHAGSTFSLILPTTEVAVFIELATQNGLFL 175


>gi|238788232|ref|ZP_04632027.1| Methyltransferase small [Yersinia frederiksenii ATCC 33641]
 gi|238723819|gb|EEQ15464.1| Methyltransferase small [Yersinia frederiksenii ATCC 33641]
          Length = 248

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + + S P  +  GV++  +A + A SNA  +  +ER 
Sbjct: 42  WVPIEKARKVLDIGCGSGLIALMIAQRSAPDVEIDGVELEPEAAQQASSNAAQSPWAERV 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 102 HIYAQDIHQFAENHPHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + + K+G+  V + ++   ++  +   +  F V+     +D  G    R+LL
Sbjct: 153 ALLNCAEKLITKEGVFCVVLPHDLGGELAHLAVQQDWF-VHCQVDIRDRPGKPLHRMLL 210


>gi|241896317|ref|ZP_04783613.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
 gi|241870297|gb|EER74048.1| methyltransferase [Weissella paramesenteroides ATCC 33313]
          Length = 262

 Score = 69.0 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 69/166 (41%), Gaps = 10/166 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +     K      +DLG G GAV L +  +    + VGV+I  +  ++A+ + +
Sbjct: 41  DAVLLANFAEPRKNGRGLTVDLGAGNGAVSLFMAHKVSG-QIVGVEIQERLADMAQRSVM 99

Query: 143 TNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N ++++   + +D    F+ +  G  D++VSNPPY        +  E + +    ++  
Sbjct: 100 MNDLTDKIRIMNADMRDIFNDIRPGSADMVVSNPPYFSIDNEHTVMHENKHY----AIAR 155

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               ++    +     + L       +    ++  +++   +   L
Sbjct: 156 HE-LMADLDLVTYTAKKLLKNKAHFFMVHRPDRLFEILESLQKNHL 200


>gi|217967343|ref|YP_002352849.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
           6724]
 gi|226710074|sp|B8E1A7|PRMA_DICTD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|217336442|gb|ACK42235.1| ribosomal protein L11 methyltransferase [Dictyoglomus turgidum DSM
           6724]
          Length = 299

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 17/136 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++ + +LD+GTG+G + + + K+    K  GVDI  KA+E+AK NA  N V    +  ++
Sbjct: 162 KEGMDVLDVGTGSGILSI-VAKKLGGDKVKGVDIDEKAIEVAKKNAEGNHVE--VEFQKN 218

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG--- 212
           D    +   +D++V+N   + + I+  L   V+            DG+     I      
Sbjct: 219 DLIDGINEKYDIVVAN---LIAEIILKLNANVKR-------VLKTDGIYIVSGIVQEKLD 268

Query: 213 -VSRHLNKDGLCSVEI 227
            +   L + G   +E+
Sbjct: 269 MILNSLRESGFKLLEV 284


>gi|237730016|ref|ZP_04560497.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908622|gb|EEH94540.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 378

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + + LL ++P    V VD S  A+  ++ N  
Sbjct: 214 DIGARFFIEHLPENLEGEIVDLGCGNGVIGMTLLAKNPEASVVFVDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +N     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 SNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------KHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNIAWEMFHHARRCLKINGELYI 338


>gi|304311684|ref|YP_003811282.1| Ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HdN1]
 gi|301797417|emb|CBL45637.1| Ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HdN1]
          Length = 329

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 67/187 (35%), Gaps = 36/187 (19%)

Query: 52  HRILGW------RDFYNVRLTLSSDTFEPRPETELL----VDSA---LAFSLPRIEKRDV 98
            +I+G       RD++ +RL    D  +   +        +D+    LA   P++ ++  
Sbjct: 126 QKIIGDSSAPDDRDYHRLRLIGEEDGLQFYSKPGQFGWEKIDAGSQLLASCFPQLFQQSP 185

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LDLG G G + L + +  P  +    D +  AL   + N   + +    + +  D  
Sbjct: 186 GRVLDLGCGYGYLSLQVSRYHP-SQITATDNNSAALLSCRFNFQFHHI-HYGNVIADDCA 243

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             + GLFD ++ NPP+ +                                  +    HL+
Sbjct: 244 RQITGLFDTVICNPPFHQGFDTRR---------------------DITTRFIEAAHSHLD 282

Query: 219 KDGLCSV 225
           + G    
Sbjct: 283 RKGQALF 289


>gi|258611633|ref|ZP_05234310.2| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258602041|gb|EEW15366.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
          Length = 250

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R    I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPVRKG-EIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 168 GKANFVHRPERLLDIIDIMRKYRL 191


>gi|84996989|ref|XP_953216.1| methylase-like protein [Theileria annulata strain Ankara]
 gi|65304212|emb|CAI76591.1| methylase-like protein, putative [Theileria annulata]
          Length = 282

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 78/199 (39%), Gaps = 23/199 (11%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP--FFKGVGV 127
           + + P  +T   VD  ++     I K   + IL++G+G+G +   +L        +   +
Sbjct: 79  NVYIPSEDTFFFVD-VISKDFKNILKSKPILILEIGSGSGYISTYILNLFKYNNAQEHNI 137

Query: 128 D--ISCKALEIAKSN----AVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIV 180
              IS    +I   +      +N +    + +  D F+++  + FD I  NPPY+     
Sbjct: 138 PLCISTDINKIGTLSTSMMIKSNKLESFSECVCMDLFNNLRPVEFDFIFFNPPYVVGTDD 197

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D   +  +      + +GGI+G        + V ++++  G   + +   ++  +  I E
Sbjct: 198 DTSDMIDK------AWNGGINGSETIIRFINSVDKYISSGGFVYLLV--EKRNKINEILE 249

Query: 241 -----SRKLFLVNAFKDYG 254
                     ++   K  G
Sbjct: 250 LIKENEFHYKIIGTRKVIG 268


>gi|307708536|ref|ZP_07645001.1| methyltransferase small domain superfamily [Streptococcus mitis
           NCTC 12261]
 gi|307615452|gb|EFN94660.1| methyltransferase small domain superfamily [Streptococcus mitis
           NCTC 12261]
          Length = 126

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 40/153 (26%)

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L+L K     +   VDI+ +AL++A+ NA  N V       QS+ +  VEG FD ++S
Sbjct: 1   MGLSLAKAY-GVQATMVDINNRALDLARQNAERNKVEA--TIFQSNIYEQVEGTFDHVIS 57

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           NPP                            G      I +     L   G  ++ I   
Sbjct: 58  NPPIRA-------------------------GKQVVHEIIEKSKDFLETGGDLTIVIQKK 92

Query: 231 QKV-----DVVRIF-------ESRKLFLVNAFK 251
           Q        +  +F       + +  +++ + K
Sbjct: 93  QGAPSAKSKMEEVFGNCEIVKKDKGYYILRSVK 125


>gi|259419236|ref|ZP_05743153.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B]
 gi|259345458|gb|EEW57312.1| SAM-dependent methyltransferase [Silicibacter sp. TrichCH4B]
          Length = 405

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +          R+LD+ +  G   LA+L          VD S  AL++A
Sbjct: 211 TGLFYDQRDNHAFAARLVAPGARVLDVFSHVGGFGLAMLAAGAG-HATCVDGSAAALDLA 269

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            + A  +G  +RF+  Q D F  +         FDV+V +PP                  
Sbjct: 270 TAGAAASGHGDRFEARQGDAFDVLTALGAEGAQFDVVVCDPPAFAPS------------- 316

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +L+    GL  Y  +A   +  +   G   +
Sbjct: 317 -KQALEA---GLRAYERVAKLAAPLVKPGGYLGL 346


>gi|313895855|ref|ZP_07829409.1| methyltransferase small domain protein [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312975280|gb|EFR40741.1| methyltransferase small domain protein [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 241

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 64  RLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            L         R +     +D+ L    PR+  R+  R+LDLGTG G + L ++ E    
Sbjct: 8   DLACGGRRIIQRTDEFCFSMDAVLLAHFPRLTGRE--RVLDLGTGAGVIPLLIVDEVR-- 63

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
           + + V+++     +A  NA  NGVS +    + D+       V   FD++ +NPPY  
Sbjct: 64  EILAVELNSAQAALAVRNAALNGVSGKITVREGDYRDPPALFVFESFDLVFANPPYYP 121


>gi|228910149|ref|ZP_04073968.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis IBL
           200]
 gi|228941479|ref|ZP_04104029.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974409|ref|ZP_04134977.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981004|ref|ZP_04141306.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           Bt407]
 gi|229071817|ref|ZP_04205031.1| Ribosomal protein L11 methyltransferase [Bacillus cereus F65185]
 gi|229081574|ref|ZP_04214071.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock4-2]
 gi|229180589|ref|ZP_04307931.1| Ribosomal protein L11 methyltransferase [Bacillus cereus 172560W]
 gi|228603013|gb|EEK60492.1| Ribosomal protein L11 methyltransferase [Bacillus cereus 172560W]
 gi|228701730|gb|EEL54219.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock4-2]
 gi|228711296|gb|EEL63257.1| Ribosomal protein L11 methyltransferase [Bacillus cereus F65185]
 gi|228778664|gb|EEM26929.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           Bt407]
 gi|228785245|gb|EEM33256.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818129|gb|EEM64204.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228849432|gb|EEM94267.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis IBL
           200]
 gi|326942095|gb|AEA17991.1| ribosomal protein L11 [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 312

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|206978418|ref|ZP_03239287.1| ribosomal protein L11 methyltransferase [Bacillus cereus H3081.97]
 gi|217961802|ref|YP_002340372.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH187]
 gi|229141050|ref|ZP_04269592.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-ST26]
 gi|226710054|sp|B7HPL1|PRMA_BACC7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|206743374|gb|EDZ54812.1| ribosomal protein L11 methyltransferase [Bacillus cereus H3081.97]
 gi|217066655|gb|ACJ80905.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH187]
 gi|228642328|gb|EEK98617.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-ST26]
          Length = 312

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|15679861|ref|NP_276979.1| met-10+ protein [Methanothermobacter thermautotrophicus str. Delta
           H]
 gi|2623010|gb|AAB86339.1| met-10+ protein [Methanothermobacter thermautotrophicus str. Delta
           H]
          Length = 352

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 61/196 (31%), Gaps = 44/196 (22%)

Query: 61  YNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y  R+ +      F PR         A        + +D   +LD+  G G   +A+ + 
Sbjct: 157 YGSRIKVDIKDVYFSPR--------LANERETVAAQVKDGEVVLDMFAGAGPFAIAVARH 208

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPYI 175
               +   VDI+  A+   + NA  N   +    ++ D    +       D I+ N P  
Sbjct: 209 GRASRVYAVDINPAAVRYIEENARLNHAEDVIVAVEGDVREFLRDRECFADHIIMNLP-- 266

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVD 234
                                     G +      D   R L   G+    E   + K  
Sbjct: 267 --------------------------GSAC--EFLDDAIRALRDGGVIHYYEFARDFKTP 298

Query: 235 VVRIFESRKLFLVNAF 250
           V R+ E+ K F V+  
Sbjct: 299 VNRLKEAAKPFHVDVL 314


>gi|167037800|ref|YP_001665378.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116219|ref|YP_004186378.1| 50S ribosomal protein L11 methyltransferase [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|226710124|sp|B0KA79|PRMA_THEP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166856634|gb|ABY95042.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929310|gb|ADV79995.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 308

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +   K     +    DI   ++E+A+ N   N +       +SD  S 
Sbjct: 177 VFDVGCGSGILSITSSKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLSE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
             G  D+IV+N   I + ++  L  EV  +
Sbjct: 235 FRGKADIIVAN---IIADVIIKLSAEVPKY 261


>gi|21282171|ref|NP_645259.1| hypothetical protein MW0442 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485351|ref|YP_042572.1| hypothetical protein SAS0444 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207411|ref|ZP_06923850.1| methyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910370|ref|ZP_07127823.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH70]
 gi|21203607|dbj|BAB94307.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243794|emb|CAG42219.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296887974|gb|EFH26868.1| methyltransferase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300888359|gb|EFK83546.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 241

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 29/197 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYITMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++     +   
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVH---RAER 172

Query: 235 VVRIFESRKLFLVNAFK 251
           ++ +    +   +   K
Sbjct: 173 LMDVLFEMRKVNIEPKK 189


>gi|329848573|ref|ZP_08263601.1| methyltransferase small domain protein [Asticcacaulis biprosthecum
           C19]
 gi|328843636|gb|EGF93205.1| methyltransferase small domain protein [Asticcacaulis biprosthecum
           C19]
          Length = 229

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 20/163 (12%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              + L+LG G G   L+L    P     G++       +A+ NA  NG +E    ++ D
Sbjct: 25  PRGKALELGCGAGGAILSLKARCPDLALTGIEREPVYAGLARENAALNGNAE-VTVIEGD 83

Query: 157 WFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +  +      FD++ SNPP+ +         + +    R +     DGL  +    D 
Sbjct: 84  IGAGFKTFGLDRFDLVFSNPPFFDDPDTLRAPHDAK----RPAWIA-DDGLGAW---LDF 135

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFE----SRKLFLVNAFK 251
               +   G         +   +  I          F V   +
Sbjct: 136 ALAAVKDGGDIVFIH---RADRLADILTGLSSKAGSFRVRPIQ 175


>gi|320352639|ref|YP_004193978.1| ribosomal L11 methyltransferase [Desulfobulbus propionicus DSM
           2032]
 gi|320121141|gb|ADW16687.1| ribosomal L11 methyltransferase [Desulfobulbus propionicus DSM
           2032]
          Length = 309

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 62  NVRLTLSSDTFEPRPETELL---------------VDSALAFSLPRIEKRDVVRILDLGT 106
            + +  S + ++P P  +++                  AL      +E       LD+GT
Sbjct: 122 GLVIKPSWEAYQPAPGQQVIEMDPGMAFGTGQHASTRMALELIKGSMESIQPQEALDVGT 181

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           GTG + +A        + + +D    A+ +A+ N   NG++ R +   +   + ++G F 
Sbjct: 182 GTGILAMA-ATRFGAKRVIAIDNDPDAVAVARENIEKNGLAGRIEVSATPV-TQIQGSFP 239

Query: 167 VIVSN 171
           ++ +N
Sbjct: 240 LVCAN 244


>gi|328906428|gb|EGG26203.1| LOW QUALITY PROTEIN: methyltransferase small domain protein
           [Propionibacterium sp. P08]
          Length = 269

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 22/122 (18%)

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LG G G +   L +  P  +    D+S +A++  +  A  NG+S              + 
Sbjct: 134 LGCGNGVISAHLAQRLPHARVHATDVSWQAVDSTRLTADANGLSI-VTHWCDGLADLPDD 192

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              V+V+NPP+             +D  P ++             +    +R L+  G  
Sbjct: 193 SVGVVVTNPPFHRGT--------AQDHAPTVA-------------MLTDAARALHPGGTL 231

Query: 224 SV 225
             
Sbjct: 232 WC 233


>gi|295425175|ref|ZP_06817878.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295064951|gb|EFG55856.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 343

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+      F    +T  L   A      R       ++ DL +G        +     
Sbjct: 17  NLRIVQDKTAFSFSSDTLFLAYWAKNAIYDRY------KVADLCSGN-CAATMYMAYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   ++I  +A   A  +   N +  R    Q +  ++ +      +DV+  NPPY + 
Sbjct: 70  AKYDAIEIQDEAYSQAVRSIELNKMENRITVHQDNVLNAPKFLRKDSYDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHEILINL----------EQIIEVASGLLKMKGKMFMVH 173


>gi|195941222|ref|ZP_03086604.1| hypothetical protein EscherichcoliO157_33337 [Escherichia coli
           O157:H7 str. EC4024]
          Length = 336

 Score = 69.0 bits (168), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L LL ++P    V  D S  A+  ++ N  
Sbjct: 214 DIGARFFMEHLPENLEGEIVDLGCGNGVIGLTLLAKNPEASVVFSDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYI-ESVIVDCLGLEVRDF 190
           TN     +R + + ++  S VE   F+ +  NPP+  +  + D +  E+   
Sbjct: 274 TNMPDALDRCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNVAWEMFHH 325


>gi|309776642|ref|ZP_07671618.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915602|gb|EFP61366.1| methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 400

 Score = 68.6 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 30/167 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E     R++D  + TG   L     +   + V VD+S  AL+ A  NA  N +  R   +
Sbjct: 224 EMAQGKRVMDCFSHTGGFALNAAYGNAQ-QVVAVDVSQTALDQAYENAKLNQLENRISFV 282

Query: 154 QSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           ++D F  +    EG FD+I+ +PP                   R ++D   +G   Y+ I
Sbjct: 283 KADVFKYLDACEEGQFDIIILDPPAFTKS--------------RRTIDHAYNG---YKRI 325

Query: 210 ADGVSRHLNKDGLCS-------VEIGYNQKVDVVRIFESRKLFLVNA 249
                + L + G          +EI  N +  +    +   + L   
Sbjct: 326 NKKAMKLLGRGGYLITCSCSRFMEI-DNFEKMLREAAQETGVTLKQV 371


>gi|195977785|ref|YP_002123029.1| methyltransferase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974490|gb|ACG62016.1| methyltransferase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 255

 Score = 68.6 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 67/171 (39%), Gaps = 21/171 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  R +  I+DL +G GAV L           V +++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTQTKASIVEIELQPRLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + ++ +     D+I+ NPPY +S       L         +  
Sbjct: 90  RLNQLEDQVTMICDDLTNLLQHVPRSGVDIILCNPPYFKSSQTSKKNLSEHYLLARHEIT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +L            I       L  +G  ++    ++ ++++   ++  L
Sbjct: 150 TNLA----------KICQVARHALKSNGRLAMVHRPDRFLEILDTLKTNGL 190


>gi|115380679|ref|ZP_01467602.1| methionine S-methyltransferase, putative [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362314|gb|EAU61626.1| methionine S-methyltransferase, putative [Stigmatella aurantiaca
           DW4/3-1]
          Length = 707

 Score = 68.6 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 77/208 (37%), Gaps = 25/208 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L L    F P       ++  L   L     +   R++++G+G+G +CLAL + +   
Sbjct: 67  LELLLLPSIFAPEAWAHTFLEGLLKVPLDEYAGK---RLVEVGSGSGWICLALARFTRLA 123

Query: 123 KGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWFSSVE--GLFDVIVSNPPYIES 177
             +GVD++  +  +A  NA  NG   +  R    +SD    V     +D +V   P +  
Sbjct: 124 HVLGVDLNPHSAPLAWCNAWLNGDEALVSRLSFGESDLLRQVPVGEPWDFVVGCIPQVLR 183

Query: 178 VIVDCLGLEVRDFDPRISLDG----------GID--GLSHYRTIADGVSRHLNKDGLCSV 225
                L  EV   D   +L              D  GL     + D     L+ +G   +
Sbjct: 184 GE--GLPAEVSQAD-EQALYDLSNYCAIQNVYEDHFGLGLNARLLDEAPERLSPEGRLLL 240

Query: 226 -EIGYNQKVDVVRIFESRKL-FLVNAFK 251
              G   +  + R+F  R     V   K
Sbjct: 241 NLAGRPGRAIIERMFTRRGFTTWVRVAK 268


>gi|228954598|ref|ZP_04116622.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805044|gb|EEM51639.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 312

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|251796222|ref|YP_003010953.1| ribosomal protein L11 methyltransferase [Paenibacillus sp. JDR-2]
 gi|247543848|gb|ACT00867.1| ribosomal protein L11 methyltransferase [Paenibacillus sp. JDR-2]
          Length = 333

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 62/158 (39%), Gaps = 13/158 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +    +    + + +D+   A+  A  N   NG+ +  + L+S
Sbjct: 173 KGDEEVIDVGTGSGILAIG-AMKLGARRVLALDLDPVAVSSATENIRLNGLQDDVEVLES 231

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    + G     V+    + + +   + L V +    ++               D V  
Sbjct: 232 DLLGVLGGKVVHAVNERDALATSVTLPVDLVVANI---LA--------EIILLFIDDVFS 280

Query: 216 HLNKDGL-CSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            L  +G+  +  I  N++ DV          +V+  +D
Sbjct: 281 ALKPNGIYIASGIYMNKETDVEEGLIRSGFEIVDKRRD 318


>gi|30264383|ref|NP_846760.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Ames]
 gi|47529834|ref|YP_021183.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49187207|ref|YP_030459.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Sterne]
 gi|49481320|ref|YP_038367.1| ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|52141191|ref|YP_085638.1| ribosomal protein L11 methyltransferase [Bacillus cereus E33L]
 gi|65321685|ref|ZP_00394644.1| COG2264: Ribosomal protein L11 methylase [Bacillus anthracis str.
           A2012]
 gi|118479480|ref|YP_896631.1| ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           str. Al Hakam]
 gi|165872039|ref|ZP_02216679.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0488]
 gi|167634595|ref|ZP_02392915.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0442]
 gi|167638656|ref|ZP_02396932.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0193]
 gi|170687478|ref|ZP_02878695.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0465]
 gi|170707375|ref|ZP_02897829.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0389]
 gi|177653293|ref|ZP_02935545.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0174]
 gi|190567039|ref|ZP_03019955.1| ribosomal protein L11 methyltransferase [Bacillus anthracis
           Tsiankovskii-I]
 gi|196034488|ref|ZP_03101897.1| ribosomal protein L11 methyltransferase [Bacillus cereus W]
 gi|196039312|ref|ZP_03106618.1| ribosomal protein L11 methyltransferase [Bacillus cereus
           NVH0597-99]
 gi|218905449|ref|YP_002453283.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH820]
 gi|225866293|ref|YP_002751671.1| ribosomal protein L11 methyltransferase [Bacillus cereus 03BB102]
 gi|227817088|ref|YP_002817097.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           CDC 684]
 gi|228916944|ref|ZP_04080505.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228929356|ref|ZP_04092380.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228935632|ref|ZP_04098446.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228948025|ref|ZP_04110310.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229093382|ref|ZP_04224487.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-42]
 gi|229123851|ref|ZP_04253044.1| Ribosomal protein L11 methyltransferase [Bacillus cereus 95/8201]
 gi|229186552|ref|ZP_04313713.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BGSC 6E1]
 gi|229604151|ref|YP_002868601.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0248]
 gi|254684069|ref|ZP_05147929.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721903|ref|ZP_05183692.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A1055]
 gi|254736417|ref|ZP_05194123.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741455|ref|ZP_05199142.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Kruger B]
 gi|254750893|ref|ZP_05202932.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Vollum]
 gi|254757779|ref|ZP_05209806.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Australia 94]
 gi|300118698|ref|ZP_07056426.1| ribosomal protein L11 methyltransferase [Bacillus cereus SJ1]
 gi|301055804|ref|YP_003794015.1| ribosomal protein L11 methyltransferase [Bacillus anthracis CI]
 gi|38605213|sp|Q81LS4|PRMA_BACAN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|60390326|sp|Q634M9|PRMA_BACCZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|60390445|sp|Q6HDK9|PRMA_BACHK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223395|sp|A0RIT1|PRMA_BACAH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710051|sp|B7JN37|PRMA_BACC0 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254782826|sp|C3P8L8|PRMA_BACAA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254782827|sp|C3L5R5|PRMA_BACAC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254782828|sp|C1ESK6|PRMA_BACC3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|30259041|gb|AAP28246.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Ames]
 gi|47504982|gb|AAT33658.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49181134|gb|AAT56510.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           Sterne]
 gi|49332876|gb|AAT63522.1| ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|51974660|gb|AAU16210.1| ribosomal protein L11 methyltransferase [Bacillus cereus E33L]
 gi|118418705|gb|ABK87124.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Bacillus
           thuringiensis str. Al Hakam]
 gi|164712170|gb|EDR17707.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0488]
 gi|167513504|gb|EDR88874.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0193]
 gi|167530047|gb|EDR92782.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0442]
 gi|170127619|gb|EDS96492.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0389]
 gi|170668673|gb|EDT19419.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0465]
 gi|172081575|gb|EDT66647.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0174]
 gi|190562030|gb|EDV15999.1| ribosomal protein L11 methyltransferase [Bacillus anthracis
           Tsiankovskii-I]
 gi|195993030|gb|EDX56989.1| ribosomal protein L11 methyltransferase [Bacillus cereus W]
 gi|196029939|gb|EDX68540.1| ribosomal protein L11 methyltransferase [Bacillus cereus
           NVH0597-99]
 gi|218537172|gb|ACK89570.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH820]
 gi|225789933|gb|ACO30150.1| ribosomal protein L11 methyltransferase [Bacillus cereus 03BB102]
 gi|227007242|gb|ACP16985.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           CDC 684]
 gi|228596811|gb|EEK54470.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BGSC 6E1]
 gi|228659565|gb|EEL15212.1| Ribosomal protein L11 methyltransferase [Bacillus cereus 95/8201]
 gi|228689976|gb|EEL43779.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-42]
 gi|228811611|gb|EEM57947.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228823992|gb|EEM69810.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228830307|gb|EEM75920.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228842665|gb|EEM87752.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229268559|gb|ACQ50196.1| ribosomal protein L11 methyltransferase [Bacillus anthracis str.
           A0248]
 gi|298723947|gb|EFI64661.1| ribosomal protein L11 methyltransferase [Bacillus cereus SJ1]
 gi|300377973|gb|ADK06877.1| ribosomal protein L11 methyltransferase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 312

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDVVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|283851152|ref|ZP_06368436.1| methyltransferase small [Desulfovibrio sp. FW1012B]
 gi|283573548|gb|EFC21524.1| methyltransferase small [Desulfovibrio sp. FW1012B]
          Length = 259

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 97  DVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              R LDLGTG G   L   L ++ P    +G+D     +E A+ NA   G+++RFD   
Sbjct: 38  PGCRALDLGTGCGPAGLGWMLARQDPEATVLGLDKDPAMVEAARENARRLGLADRFDARL 97

Query: 155 SDWFS------SVEGLFDVIVSNPPYIESVI---VDCLGLEVRDFD 191
            D          V G  D++++NPPY         +  G E   F+
Sbjct: 98  LDVRDLGTDAGLVPGSCDLVLANPPYRHPGSGRRPEHQGREAARFE 143


>gi|328945759|gb|EGG39910.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           sanguinis SK1087]
          Length = 189

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL ++E     R+LD+G+GTG+V +   +  P  + V V+ +  A+ + + N  
Sbjct: 16  EEVRAISLDKLELHRAKRMLDVGSGTGSVTIQAARTYPELEVVAVERNEDAVALTQENIQ 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVI 168
             G        Q      ++G FD I
Sbjct: 76  HFGC-HNVRLHQGLAPIELDGSFDAI 100


>gi|294142115|ref|YP_003558093.1| methyltransferase [Shewanella violacea DSS12]
 gi|293328584|dbj|BAJ03315.1| methyltransferase, putative [Shewanella violacea DSS12]
          Length = 421

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  A+E A+ N  
Sbjct: 218 DIGARIMLDNMPKGDFTSIIDLGCGNGVLGLHAKQVFPKAYVHFIDDSEMAVESARQNWS 277

Query: 143 TNGVS------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +       E+      D  + +      D+I+ NPP+ +   +             I
Sbjct: 278 LNNLDTTDLVGEQATFGWDDCLTHLSEGVRPDLILCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLQSWRALKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|317128302|ref|YP_004094584.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus
           DSM 2522]
 gi|315473250|gb|ADU29853.1| ribosomal protein L11 methyltransferase [Bacillus cellulosilyticus
           DSM 2522]
          Length = 313

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 68/219 (31%), Gaps = 54/219 (24%)

Query: 55  LGWRDFY-------NVRLTLSSDTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y       N+ +T + + +E   E EL+++              + L       
Sbjct: 112 TAWKKYYKPVKVSENITITPTWEEYEKVHEKELIIELDPGMAFGTGTHPTTVLCIQALEK 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +A  K       + +D+   A++ A  N   N V +R D  
Sbjct: 172 HLKLGDTVVDVGTGSGVLSIAAAKLGAQ-HILALDLDDVAVKAANLNVKLNRVQDRIDVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           QS+    VE       SNP  I + I+                            + D  
Sbjct: 231 QSNLLEKVE-------SNPTLIIANILA----------------------EVIVKMTDDA 261

Query: 214 SRHLNKDGLCSVEIGYNQKVD--VVRIFESRKLFLVNAF 250
              L   G      G  Q     V          +    
Sbjct: 262 FGCLQPGGKIIT-SGIIQGKRSFVKDALIKSGFEVCEVV 299


>gi|167040700|ref|YP_001663685.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X514]
 gi|300914741|ref|ZP_07132057.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X561]
 gi|307724025|ref|YP_003903776.1| 50S ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X513]
 gi|226710125|sp|B0K3X8|PRMA_THEPX RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166854940|gb|ABY93349.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X514]
 gi|300889676|gb|EFK84822.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X561]
 gi|307581086|gb|ADN54485.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter sp.
           X513]
          Length = 308

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 31/124 (25%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +   K     +    DI   ++E+A+ N   N +       +SD    
Sbjct: 177 VFDVGCGSGILSITSSKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLGE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  D+IV+N                      I+             ++    ++L ++
Sbjct: 235 FRGKADIIVAN---------------------IIA--------DVIIRLSAEAPKYLKEE 265

Query: 221 GLCS 224
           GL  
Sbjct: 266 GLFL 269


>gi|227538469|ref|ZP_03968518.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241655|gb|EEI91670.1| possible methyltransferase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 147

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILD+GTGTG + L L +         V+I   A + AK N + +  SER    Q  
Sbjct: 36  PAAHILDIGTGTGVIALMLAQRFENATLEAVEIDALAADRAKQNFLNSPFSERMYA-QHV 94

Query: 157 WFSSVEG--LFDVIVSNPPY 174
            F  +     +D+I+SNPP+
Sbjct: 95  SFEDLHPVSKYDLIISNPPF 114


>gi|295837416|ref|ZP_06824349.1| transferase [Streptomyces sp. SPB74]
 gi|197696068|gb|EDY43001.1| transferase [Streptomyces sp. SPB74]
          Length = 507

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +     +LDLGTG+G   L     +   +    D++ +AL  A      +G       L 
Sbjct: 150 RAPADSVLDLGTGSGIQALHASAHA--VRLTATDLNPRALVFAALTLALSGAGP-ARLLA 206

Query: 155 SDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  V    FD++VSNPP++ S                   DGG +G    R +    
Sbjct: 207 GSLFEPVGTETFDLVVSNPPFVISPGARLTYR-----------DGGREGDGLCRELVSSA 255

Query: 214 SRHLNKDGLCSVEIGYNQKV 233
              LN+ G       +    
Sbjct: 256 GERLNEGGYAQFLANWEHVE 275


>gi|30022391|ref|NP_834022.1| ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           14579]
 gi|218230809|ref|YP_002369121.1| ribosomal protein L11 methyltransferase [Bacillus cereus B4264]
 gi|228960580|ref|ZP_04122228.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229129592|ref|ZP_04258561.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-Cer4]
 gi|229152514|ref|ZP_04280705.1| Ribosomal protein L11 methyltransferase [Bacillus cereus m1550]
 gi|38605209|sp|Q818F1|PRMA_BACCR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710053|sp|B7HCT8|PRMA_BACC4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|29897949|gb|AAP11223.1| Ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           14579]
 gi|218158766|gb|ACK58758.1| ribosomal protein L11 methyltransferase [Bacillus cereus B4264]
 gi|228630945|gb|EEK87583.1| Ribosomal protein L11 methyltransferase [Bacillus cereus m1550]
 gi|228653860|gb|EEL09729.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-Cer4]
 gi|228799093|gb|EEM46062.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 312

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDNIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|329731071|gb|EGG67443.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 241

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYITMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|225868914|ref|YP_002744862.1| hypothetical protein SZO_13480 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702190|emb|CAW99907.1| conserved hypothetical protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 255

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 67/171 (39%), Gaps = 21/171 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  R +  I+DL +G GAV L           V +++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTQTKASIVEIELQPRLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + ++ +     D+I+ NPPY +S       L         +  
Sbjct: 90  RLNQLEDQVTMICDDLTNLLQHVPRSGVDIILCNPPYFKSSQTSKKNLSEHYLLARHEIT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +L            I       L  +G  ++    ++ ++++   ++  L
Sbjct: 150 TNLA----------KICQVARHALKSNGRLAMVHRPDRFLEILDTLKTNGL 190


>gi|326389862|ref|ZP_08211426.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994130|gb|EGD52558.1| ribosomal protein L11 methyltransferase [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 308

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 31/124 (25%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +A  K     +    DI   ++E+A+ N   N +       +SD    
Sbjct: 177 VFDVGCGSGILSIASSKLGAK-EVYAADIDEVSVEVARQNVELNNLQ-NVKVFKSDLLGE 234

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G  D+IV+N                      I+             ++    ++L ++
Sbjct: 235 FRGKADIIVAN---------------------IIA--------DVIIRLSAEAPKYLKEE 265

Query: 221 GLCS 224
           GL  
Sbjct: 266 GLFL 269


>gi|325126010|gb|ADY85340.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 336

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E I  +LG +    +++     +F    +T LL   A          ++  ++++L +
Sbjct: 6   ENERIDYMLGDQ----LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSKVVELCS 55

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G  A  L +           V++    +  A+ +   N + +R    Q +   +     +
Sbjct: 56  GNAAASLYMA-AFNKAHYDDVELQEDIVSKARRSVELNDMQDRITVHQGNVKDAGSFLRK 114

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +DV+V NPPY ++     L  +    +   +  I+L            I    +  L 
Sbjct: 115 DSYDVVVVNPPYFKAPAGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLK 164

Query: 219 KDGLCSVEI 227
             G   +  
Sbjct: 165 MKGKMFMVH 173


>gi|104774225|ref|YP_619205.1| hypothetical protein Ldb1346 [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|103423306|emb|CAI98147.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 336

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           ++E I  +LG +    +++     +F    +T LL   A          ++  ++++L +
Sbjct: 6   ENERIDYMLGDQ----LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSKVVELCS 55

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G  A  L +           V++    +  A+ +   N + +R    Q +   +     +
Sbjct: 56  GNAAASLYMA-AFNKAHYDDVELQEDIVSKARRSVELNDMQDRITVHQGNVKDAGSFLRK 114

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             +DV+V NPPY ++     L  +    +   +  I+L            I    +  L 
Sbjct: 115 DSYDVVVVNPPYFKAPAGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLK 164

Query: 219 KDGLCSVEI 227
             G   +  
Sbjct: 165 MKGKMFMVH 173


>gi|229025778|ref|ZP_04182177.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH1272]
 gi|228735486|gb|EEL86082.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH1272]
          Length = 312

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTVIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDVVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|205372014|ref|ZP_03224832.1| methyltransferase [Bacillus coahuilensis m4-4]
          Length = 243

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 72/204 (35%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F    +  LL + A          R   +++DL TG 
Sbjct: 6   ERLDYLLKE----NLRIIQSPSVFSFSLDAVLLANFA-------SVPRAKGKVMDLCTGN 54

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGL 164
           G V L L  ++  F   G++I  +  ++A+ +   N +  +      D         +  
Sbjct: 55  GVVPLLLSSKTRTF-IEGLEIQERLYDMARRSVEYNELEGQIKLYHGDLKDLPKEIRKDS 113

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +D +  NPPY  +   + +       +   +   +LD           +    S  L   
Sbjct: 114 YDTVTCNPPYFTTSHEEVINPNEHLAIARHEIYCTLD----------DVMRTTSGLLKYG 163

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + VD++    S  L
Sbjct: 164 GKAAFVHRPGRLVDIITSMRSHDL 187


>gi|62642094|gb|AAX92686.1| DNA-(adenosine-N6-)-methyltransferase [Picea abies]
          Length = 181

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNP 172
           +L E    + +  DI+  A+E+ K     +GV        L S     + G  DV+V NP
Sbjct: 1   MLGEGTGIQYLATDINSAAIEVTKKTLEAHGVHAEVILTDLVSGLDKRLAGTVDVLVVNP 60

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PY+ +        EV       +  GG  G +    I   V   L+  G   +
Sbjct: 61  PYVPTSE-----EEVGGDGIAAAWAGGEHGRTVIDRILAIVDNLLSSKGWFYL 108


>gi|329947105|ref|ZP_08294481.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328526282|gb|EGF53299.1| methyltransferase small domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 202

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 27/179 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+D          +  +    LDLG G G + LAL   +     + VD++ ++L + 
Sbjct: 46  TQVLLDHV-------PDPPETGSFLDLGCGWGPITLALADAASGATVLAVDVNERSLALT 98

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPY-IESVIVDCLGLEVRDFDPR 193
             NA T G+     +      + +       D+I SNPP  I    +  L L+       
Sbjct: 99  ARNAETAGLDNVRTSPAEALLTELRESSRTVDLIWSNPPVRIGKEALHTLLLDWLP---- 154

Query: 194 ISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +  D G   L   + + AD ++  L   G            DV R   S+   ++   +
Sbjct: 155 LLSDDGEAWLVVLKNLGADSLAAWLRDQGW-----------DVSRQASSKGFRVLRVRR 202


>gi|149423607|ref|XP_001516646.1| PREDICTED: similar to HemK methyltransferase family member 1,
           partial [Ornithorhynchus anatinus]
          Length = 137

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 6/83 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD-----SVLDDRQRFFLTNAIVRSLKHESIHRILG 56
           +A   S   +  V G +     ++       + L   Q   +       L+   +  +LG
Sbjct: 56  EARESSEYIVSHVLG-AKTFQSLNQRIDCCSTPLTAIQLTRIQELSSLRLQRMPVQYVLG 114

Query: 57  WRDFYNVRLTLSSDTFEPRPETE 79
             DF ++ L ++   F PRPETE
Sbjct: 115 EWDFQDLTLKMAPPVFIPRPETE 137


>gi|253689448|ref|YP_003018638.1| methyltransferase small [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|262828548|sp|C6DC08|TRMN6_PECCP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|251756026|gb|ACT14102.1| methyltransferase small [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 248

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                 V RILD+G+G+G + L L + S    +   V++   A + AK N   +  ++R 
Sbjct: 42  WAPLSSVTRILDIGSGSGLLALMLAQRSDTHVRIDAVELDSAASQQAKENISASPWADRI 101

Query: 151 DTLQSDWFSSVEGL---FDVIVSNPPYIESVI 179
                D     +     + +I+SNPPY    I
Sbjct: 102 AVYAEDIIDFADTRSADYSLIISNPPYFPPGI 133


>gi|116629457|ref|YP_814629.1| O-methyltransferase [Lactobacillus gasseri ATCC 33323]
 gi|311110895|ref|ZP_07712292.1| putative GIY-YIG catalytic domain protein [Lactobacillus gasseri
           MV-22]
 gi|116095039|gb|ABJ60191.1| Predicted O-methyltransferase [Lactobacillus gasseri ATCC 33323]
 gi|311066049|gb|EFQ46389.1| putative GIY-YIG catalytic domain protein [Lactobacillus gasseri
           MV-22]
          Length = 338

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+    D F    +T LL          +I+  D  +++DL +G  A  + +      
Sbjct: 17  DLRIIQEKDAFSFSLDTLLL------GYFAQIKIHDNYKVVDLCSGNAAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                V+I     + A  +   N +  R +    +   + +      +D++V NPPY + 
Sbjct: 70  AHYDAVEIQADMADQASRSIKLNKLENRIEVHCLNALEAPKKLGKDKYDMVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHVINPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|229098783|ref|ZP_04229721.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-29]
 gi|229104943|ref|ZP_04235599.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-28]
 gi|228678437|gb|EEL32658.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-28]
 gi|228684627|gb|EEL38567.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock3-29]
          Length = 312

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+        T+      + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQSGDTVIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|188587917|ref|YP_001922499.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188498198|gb|ACD51334.1| SAM-dependent methyltransferase [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 250

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 65/176 (36%), Gaps = 19/176 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +      I+ +   R++DL TGTG +   L  +    +  G++I  + +++A+ + 
Sbjct: 36  VDAVILSDFANIKNKH--RVIDLCTGTGIIPFLLYGKYNPKEIYGLEIQEEMVKMAEKSV 93

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYI---ESVIVDCLGLEVRDFDPRI 194
             N + ++   ++ D     +      FDV+  NPPY      +I     L +   +   
Sbjct: 94  KLNALEDKITIIKEDLKNIEYLKKMDKFDVVTVNPPYKLNNAGIINPSDKLAIARHEVLC 153

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +L            +       L  +G   +     +  D+  +    K+      
Sbjct: 154 NL----------EDVIYASKILLKDNGRMFIVHRPERLADIFTLMRKYKIEPKRVR 199


>gi|126348302|emb|CAJ90023.1| putative ribosomal RNA small subunit methyltransferase
           [Streptomyces ambofaciens ATCC 23877]
          Length = 383

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 22/144 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       ++DLG G G V  A+    P  + +  D S +A+  A++   
Sbjct: 225 DIGTRFFLGHLPDAGARHVVDLGCGNGVVGTAVALADPGAEVLFTDESFQAVASARATYR 284

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +G + + +    D    V +G  D++++NPP+                           
Sbjct: 285 ASGAAGKAEFRVGDGLEGVPDGSVDLVLNNPPFHSHQATTD------------------- 325

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +  R +  G  R L   G   V
Sbjct: 326 --ATARRMFAGARRALRPGGELWV 347


>gi|149371981|ref|ZP_01891300.1| hypothetical protein SCB49_08828 [unidentified eubacterium SCB49]
 gi|149355121|gb|EDM43682.1| hypothetical protein SCB49_08828 [unidentified eubacterium SCB49]
          Length = 224

 Score = 68.6 bits (167), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 17/156 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--------DT 152
           ILD+G GTG + L L +     +   V+I   A E    N   +  ++R         + 
Sbjct: 23  ILDIGAGTGVISLQLAQRDRHVQIEAVEIDDDAFEQCTENFEQSPWADRLFCYHASLQEF 82

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            Q       +  +D+I+SNPP+           E +  D +  L    D L     +   
Sbjct: 83  AQEMIEEGEQHSYDLIISNPPFYTD--------EYKTQDDKRDLARFSDALPF-EHLILC 133

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +  L++ G   V +   +++  V +   + L L+ 
Sbjct: 134 AAHLLSEKGRFCVILPKKEEISFVALAAKQHLNLLR 169


>gi|293400626|ref|ZP_06644771.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305652|gb|EFE46896.1| methyltransferase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 220

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 58/169 (34%), Gaps = 27/169 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD+GT  GA+ LA+          GV+I   A ++A+ N    GV   F  L  
Sbjct: 40  KQGERILDIGTNNGAL-LAVAATKQPAYLYGVEIQEAACKLAEHNLKDCGVP--FTILAG 96

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT------- 208
           D  +      DV++ NPPY +      L                 D L   R        
Sbjct: 97  DASNMTLPKVDVVICNPPYFKVNTHANLNE--------------SDYLRIARHECYLPFP 142

Query: 209 -IADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESR-KLFLVNAFKDYG 254
            +    +  L + G   +    ++    +  + + R  +  +    D  
Sbjct: 143 LLCKQAASTLQEKGRFYLVHRADRIGELMKELLQHRFGVRTLQFVYDQN 191


>gi|182412488|ref|YP_001817554.1| methyltransferase small [Opitutus terrae PB90-1]
 gi|177839702|gb|ACB73954.1| methyltransferase small [Opitutus terrae PB90-1]
          Length = 271

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 36/162 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           R +D G+G G + + +  + P  +  +G+++    +  A+ NAV NGV+ER D L SD +
Sbjct: 54  RGIDWGSGVGCLAI-VAAKVPSVEFVLGLELYGPNVRTARDNAVCNGVAERTDFLCSDSY 112

Query: 159 SS-----------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +            + G  + I++NPP  E                      G DG    R
Sbjct: 113 APRLPDDREKLELLAGRTEFILANPPSSE----------------------GDDGFEFRR 150

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKV-DVVRIFESRKLFLVN 248
            +  G  R+L   G   + I Y      + R+ E  + F   
Sbjct: 151 IVLRGARRYLVPGGAVLLNISYQYGARRIARLAEEVEGFRAE 192


>gi|222097757|ref|YP_002531814.1| ribosomal protein l11 methyltransferase [Bacillus cereus Q1]
 gi|254782829|sp|B9IY79|PRMA_BACCQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221241815|gb|ACM14525.1| ribosomal protein L11 methyltransferase [Bacillus cereus Q1]
          Length = 312

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALER 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|324328216|gb|ADY23476.1| ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 312

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|259047392|ref|ZP_05737793.1| methyltransferase [Granulicatella adiacens ATCC 49175]
 gi|259035583|gb|EEW36838.1| methyltransferase [Granulicatella adiacens ATCC 49175]
          Length = 254

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 72/197 (36%), Gaps = 27/197 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +  S + F    +  LL D A       I +R    I+DL +G GAV   L  ++  
Sbjct: 21  NIDIIQSREVFSFSLDAVLLADFA------TIAERRKANIVDLCSGNGAVAFLLSHKTTN 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
                V+I  +  ++A      NG+ +R   +  D   +++G+      D I  NPPY +
Sbjct: 75  P-ITAVEIQEQLYDMAMRTTQLNGLEDRITFIHQDI-RNLKGIIPKDSVDFITCNPPYFK 132

Query: 177 SVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
               +   L+    +   +  + L            +   +S  L   G   +    ++ 
Sbjct: 133 VKETNLTNLKEAYTIARHEVHLPL----------EDLLSTISGLLKMKGKAYLVHRPDRL 182

Query: 233 VDVVRIFESRKLFLVNA 249
            D++      +L     
Sbjct: 183 SDILTEARQHRLEAKRV 199


>gi|154250316|ref|YP_001411141.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
 gi|154154252|gb|ABS61484.1| methyltransferase small [Fervidobacterium nodosum Rt17-B1]
          Length = 223

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 15/155 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
              D+  +++LG+GTG V  AL K        G++I  +  E+A      N + ++   L
Sbjct: 40  PTSDIKNVIELGSGTGIVAFALAKLY-NLYVTGIEIQHELYELAIEGIHVNNLEDKVKFL 98

Query: 154 QSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             D            FD++VSN P+           ++R+   R +      GL      
Sbjct: 99  HCDVRDVENYFKAESFDMVVSNFPFHVGK---KSPDKIRNM-SRSA------GLELINDF 148

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               S  L   G     +     V V+ I    KL
Sbjct: 149 IKSSSYLLRNKGTFVFVMSPKLLVPVINILSEHKL 183


>gi|322821974|gb|EFZ28158.1| hypothetical protein TCSYLVIO_5618 [Trypanosoma cruzi]
          Length = 272

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 73/217 (33%), Gaps = 43/217 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-------- 115
                   +EP  +T LL+++ L      +        L++G G+G V   L        
Sbjct: 13  DPRFRRSVYEPEADTFLLLET-LDRDADLLRSMQPRCCLEIGCGSGTVITHLQLVLSGIS 71

Query: 116 ------------LKESPFFKGVGVDISCKALE---IAKSNAVTNGVSE---RFDTLQSDW 157
                          +   +   VDI+  ALE   +  SN +     +          + 
Sbjct: 72  GNTNNTKEVRPVSSRTWQSEFHAVDINPVALEATGVTWSNTLRRLWGDEAPHLHLHHGNL 131

Query: 158 FSSVE------------GLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLS 204
           F   +            G FDVI+ NPPY+ +  +D L    +  D    +  GG  G  
Sbjct: 132 FGPFQHEGAEGPQEAGAGEFDVILFNPPYVPTT-MDELEGAGKQGDFITAAWCGGPRGRV 190

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
                   + R L+  G+C + +   Q  DV  + E 
Sbjct: 191 LVDRFILCLPRFLSARGVCYI-VAIAQ-NDVPELMEK 225


>gi|314932709|ref|ZP_07840079.1| methyltransferase [Staphylococcus caprae C87]
 gi|313654539|gb|EFS18291.1| methyltransferase [Staphylococcus caprae C87]
          Length = 241

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              +  + D F    +  LL           IE R   RI+DL +G G + L L  +   
Sbjct: 15  GYEIIQNDDVFSFSTDALLL--------GHLIEVRKNDRIMDLCSGNGVIPLLLAAKC-N 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K   ++I  + +E+A+ + V N + ER      D  +  +      + ++  NPPY + 
Sbjct: 66  QKIEAIEIQDQLVEMARRSFVHNSLDERLTMYLMDLNNVYDTFKPSQYTLVTCNPPYFKV 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             ++    E         +    D               L + G   V    ++ +DV+ 
Sbjct: 126 NQLNQHQKEAHKIARHEVMCDFTD-------CVKAARHLLKECGRFIVVHRADRLMDVLT 178

Query: 238 IFES 241
              +
Sbjct: 179 EMRN 182


>gi|288574648|ref|ZP_06393005.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570389|gb|EFC91946.1| methyltransferase small [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 248

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +     +P     + VD+ L     ++ + +  RI +LG   GAV L L K       VG
Sbjct: 15  VDIKLLQPLKGPRVNVDTVLLAGFSKVRRGE--RICELGCAHGAVSLILAK-RKEVSVVG 71

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
           +DI    + +A+ N   N +S+R   +  D     + L    FDV+V+NPPY
Sbjct: 72  LDIQENLVHMAEKNRELNELSDRVSFIHGDLREIHKILPPQGFDVVVANPPY 123


>gi|260767868|ref|ZP_05876803.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
 gi|260617377|gb|EEX42561.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
          Length = 342

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L    + +     +   +D    F LP +     +  ++DLG G G + + + + +P
Sbjct: 164 SIELNNLPNVY-----SGESLDQGTRFLLPHLPSDTTLNHVIDLGCGNGVLSVRMGQLNP 218

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
                 VD S  A+E A+ N VTN G       + ++     E    D++V NPP+ +  
Sbjct: 219 QVNITCVDESFMAVESARQNLVTNLGQERNIACIANNCLDGFEAAHTDMVVCNPPFHQQQ 278

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 279 AITD----------HIAW-----------QMFCDSKHVLRKGGKLLVIGNRHLGYD--VK 315

Query: 235 VVRIFESRKLFLV 247
           + R+F   ++  V
Sbjct: 316 LTRLFGRSQVKTV 328


>gi|167044872|gb|ABZ09539.1| hypothetical protein ALOHA_HF4000APKG8D22ctg14g9 [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 176

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 29/156 (18%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++++ P  +T  L D         I+       LD+GTG+G   LA L E  F   VG D
Sbjct: 4   AESYPPSEDTFFLAD--------YIKNEKGEFALDIGTGSGY--LAALLEKSFSLVVGTD 53

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S         N +        +T+  +   ++   FD+++ N PY+++  +  +     
Sbjct: 54  LS--------FNVLKKQKYFTTNTVCCNGADALNQQFDLVICNMPYLKTDEILDIST--- 102

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                   DGG DGL     I       +   G   
Sbjct: 103 --------DGGRDGLEVPMKIIGSAKSRIKSGGKFI 130


>gi|332878723|ref|ZP_08446440.1| methyltransferase small domain protein [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332683360|gb|EGJ56240.1| methyltransferase small domain protein [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 234

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D   +LD+G GTG + L + +         V+I   A      N   +   +R  
Sbjct: 29  WAPVEDAASVLDIGAGTGLLSLMIAQRCDAPLIDAVEIDEAAYIECTDNFENSPWGDRLF 88

Query: 152 TLQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
              +   +  + ++ L+D I+SNPP+  +                 +L         + T
Sbjct: 89  CYHASFKELVAEIDTLYDFIISNPPFY-TADTQAPETARSTARSAAAL--------PFET 139

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           + +GV++ L+  G  +V I Y ++   + +  ++ L+
Sbjct: 140 LIEGVAQLLSDRGRFAVIIPYQEEASFIGLAAAQGLY 176


>gi|295426081|ref|ZP_06818751.1| ribosomal protein L11 methyltransferase [Lactobacillus amylolyticus
           DSM 11664]
 gi|295064250|gb|EFG55188.1| ribosomal protein L11 methyltransferase [Lactobacillus amylolyticus
           DSM 11664]
          Length = 336

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 77/214 (35%), Gaps = 53/214 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLV--DSALAFSLPRIEKR--------- 96
             W+ +Y+       L +  +   ++P  + + L+  D  LAF     +           
Sbjct: 135 TAWQKYYHVIDFSRHLAIVPEWEDYKPAFKDQQLIKLDPGLAFGTGNHKTTQLAMMGLER 194

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                + ++D+GTG+G + +A   +      +  DIS +++  AK N   N +       
Sbjct: 195 AMIKPMSVVDVGTGSGILAIA-ASKLGATDVMATDISDESMTAAKQNFALNDL-NNIRVQ 252

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++   ++V+G FD+IV+N                      ++             +   +
Sbjct: 253 KTSLLANVDGKFDIIVAN---------------------ILA--------EILLDLIPQM 283

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
             HLN+ G      I Y Q   + +  +   L +
Sbjct: 284 DAHLNQGGQIIFSGIDYLQLPKIKKALDDNNLKI 317


>gi|226438391|pdb|3GRZ|A Chain A, Crystal Structure Of Ribosomal Protein L11 Methylase From
           Lactobacillus Delbrueckii Subsp. Bulgaricus
 gi|226438392|pdb|3GRZ|B Chain B, Crystal Structure Of Ribosomal Protein L11 Methylase From
           Lactobacillus Delbrueckii Subsp. Bulgaricus
          Length = 205

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 32/151 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + + D+GTG+G + +A   +      +  DIS +++  A+ NA  NG+ +     ++ 
Sbjct: 60  KPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTS 117

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + V+G FD+IV+N                      ++             +   +  H
Sbjct: 118 LLADVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDSH 148

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           LN+DG      I Y Q   + +        +
Sbjct: 149 LNEDGQVIFSGIDYLQLPKIEQALAENSFQI 179


>gi|329766838|ref|ZP_08258367.1| hypothetical protein HMPREF0428_00064 [Gemella haemolysans M341]
 gi|328838564|gb|EGF88170.1| hypothetical protein HMPREF0428_00064 [Gemella haemolysans M341]
          Length = 244

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 67/181 (37%), Gaps = 22/181 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      + +     I++L +G G + + +L+E    K   ++I    +E+ K +  
Sbjct: 28  DSFLLPYFANVPRSFKKSIIELCSGNGGISI-ILREKSDAKVEMLEIQEDLVELTKKSIE 86

Query: 143 TNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRI 194
            NG++   +    D  +  E      FD ++ NPPY          + L   +   +   
Sbjct: 87  LNGIT-NIEVRNGDVKNVKEYYKPSSFDYVICNPPYFPVENMPNQREKLNHNISRHELLC 145

Query: 195 SLDGGIDGLSHYRTIADGVSRHL-NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +L          + I     R+L  ++G  ++     +  D++   E   L +      Y
Sbjct: 146 NL------SDIVKAI-----RYLVKQNGKFAMVHRTYRISDIISECEKNGLAIKRIRFVY 194

Query: 254 G 254
            
Sbjct: 195 S 195


>gi|303285095|ref|XP_003061838.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457168|gb|EEH54468.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 249

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 79/217 (36%), Gaps = 47/217 (21%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-----------CLALL 116
             + +EP  ++ LLVD+  A        R     +++G GTG V            +   
Sbjct: 14  HGEVYEPAEDSFLLVDALAAEWDTTFRTRPPRVAVEVGCGTGYVIASAALLASASGIVPG 73

Query: 117 KESPFFKGVG--------------------VDISCKALEIAKSNAVTNGVSE-RFDTLQS 155
              P   G G                     DI+  AL   ++    +G+++ R +  + 
Sbjct: 74  DAVPGDGGDGEIDRVQNAAAAAAAAFAYYATDINPDALATTRATLRNHGIADERVELTRG 133

Query: 156 DWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D        + G  D+++ NPPY+ +        EVR      +  GG DG      +  
Sbjct: 134 DLLGPLRERLRGKIDLLLFNPPYVLTP-----SEEVRAGGIAAAWAGGKDGREVVDRLLP 188

Query: 212 GVSRHLNKDG----LCSVEIGYNQKVDVVRIFESRKL 244
            V+  L+ DG    +  +E   N+  +V+ + E   L
Sbjct: 189 DVADVLSPDGGTMLMILLE--QNKPREVMAVLERAGL 223


>gi|258511431|ref|YP_003184865.1| hypothetical protein Aaci_1451 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478157|gb|ACV58476.1| Protein of unknown function methylase putative [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 413

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD    TGA  +          G  VDIS  A+E+A+ NA  NGV +R D   ++
Sbjct: 235 DGAHVLDCFCHTGAFAVH-ALHYGAAHGTAVDISADAVELARQNARRNGVLDRADFAVAN 293

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +         +DV++ +PP         +    R                 Y+ I 
Sbjct: 294 AFDYLREQDARGARYDVVILDPPAFAKS-RQSIESAARG----------------YKEIN 336

Query: 211 DGVSRHLNKDGLCS 224
               R L + G   
Sbjct: 337 LRAMRILREGGFLV 350


>gi|329117024|ref|ZP_08245741.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
 gi|326907429|gb|EGE54343.1| methyltransferase small domain protein [Streptococcus parauberis
           NCFD 2020]
          Length = 256

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + D F         +DS L    P I  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKDVFSYS------IDSVLLSRFPIIPTRGL--IVDLCSGNGAVGL-FASTRTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + V++  +  E+A+ + + N +  +   +  D  + +  +     D+I+ NPPY ++
Sbjct: 70  APIIEVELQDRLAEMAQRSIILNNLESQVKMVNDDLKNLLNYVPRSGVDLILCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L            I       L  +G  ++    ++ +
Sbjct: 130 KESSKKNLSEHYLLARHEITTNL----------EEICQISRHALKSNGRLAMVHRPDRFI 179

Query: 234 DVVRIFESRKL 244
           +++    S  L
Sbjct: 180 EIIDALRSNGL 190


>gi|195429739|ref|XP_002062915.1| GK19702 [Drosophila willistoni]
 gi|194159000|gb|EDW73901.1| GK19702 [Drosophila willistoni]
          Length = 296

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 10/148 (6%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++++ + +  +  +  P     L     L   L   +    VR +D+G G+  +   L  
Sbjct: 62  KEYFQLDVDFAPGSLVPTLALRLNYILWLEDLLGARKVNSKVRGIDIGCGSSCIYSLLAA 121

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWFSSVEGLFD---------V 167
           +   ++ + ++   + +E A+ N   N +        Q D     +  FD          
Sbjct: 122 KKNKWEMLALESKPQNIEYARENVKRNQLDGLIQVYAQPDKTDIFKTYFDTAIDEQDYCF 181

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            + NPP+ +S   + +G   R+ + R +
Sbjct: 182 CLCNPPFFDSNSANPMGGASRNPERRPA 209


>gi|91228318|ref|ZP_01262247.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           12G01]
 gi|91188134|gb|EAS74437.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           12G01]
          Length = 341

 Score = 68.6 bits (167), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 23/126 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P       DI+  A+  +++    NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYS 260

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  +  IVSNPP+   +  +    E                     T+     ++L K
Sbjct: 261 DTEKDYRFIVSNPPFHSGLDTNYNAAE---------------------TLLGQAPQYLTK 299

Query: 220 DGLCSV 225
           DG   +
Sbjct: 300 DGEMVI 305


>gi|284052982|ref|ZP_06383192.1| methyltransferase type 11 [Arthrospira platensis str. Paraca]
 gi|291571130|dbj|BAI93402.1| putative methyltransferase [Arthrospira platensis NIES-39]
          Length = 289

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 53/250 (21%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR--ILGWRDFYNVR---------LTLSSD 70
           ++VD ++ +D+  +     ++   L   ++        +DF+ +          LT    
Sbjct: 18  LLVDREA-IDNLDKSIDWESVCDRLTDPNLVYPQYYQTQDFHGIEGGYLNKSAALTYDPI 76

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
           T    P  E  V      ++  I  +   RILDLG GTG+  L L +  P  + +G+D+S
Sbjct: 77  TQYAIPPNETWVRQ---EAIDTITVKPR-RILDLGCGTGSTTLLLKQTFPNAEVIGLDLS 132

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              L +A++ A   G+  +F        +     F          E    D +   +   
Sbjct: 133 PYMLAVAETKAKQAGLDIKF----YHGLAEESDRF----------EPQSFDLVTASLLFH 178

Query: 191 D--PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFESRKL 244
           +  P I++            IA    R L   G   +  G+     Q   +  IFE    
Sbjct: 179 ETPPEIAI-----------AIAREAFRLLKAGGEVMILDGHQKILRQNPWLTEIFEEP-- 225

Query: 245 FLVNAFKDYG 254
                 KDY 
Sbjct: 226 ----YLKDYA 231


>gi|300724119|ref|YP_003713436.1| putative methyltransferase [Xenorhabdus nematophila ATCC 19061]
 gi|297630653|emb|CBJ91318.1| putative methyltransferase with S-adenosyl-L-methionine-dependent
           methyltransferase domain [Xenorhabdus nematophila ATCC
           19061]
          Length = 255

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 27/179 (15%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTNGVSERF 150
                +  + LD+G G+G + L + + +     +  V++   A   A  N   +    R 
Sbjct: 40  WAPVYNKNKCLDIGCGSGLIALMIAQRTKESTVIDAVELDSLAAMQAIDNVQQSPWPSRI 99

Query: 151 DTLQSDWFSSVEG------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              Q D     +              +D+I+SNPPY E  +      E R+     +   
Sbjct: 100 TIHQQDIHDFTQQHVQQNGLRKNSIQYDLIMSNPPYFEPAVACR--NEARN----QARY- 152

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-----LVNAFKD 252
             + L+H + + +   + +   GL  V + Y+      +       F      +   +D
Sbjct: 153 -TESLTH-QGLLECARKLITSTGLFCVVLPYDIGEFFEKRASELGWFTHHRVNIRDRQD 209


>gi|260557187|ref|ZP_05829403.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 19606]
 gi|260409293|gb|EEX02595.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 19606]
          Length = 337

 Score = 68.6 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 72/244 (29%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I ++ K + +             + ++         P   ++  +D+  
Sbjct: 129 SARHCQLWHLKIEKTEKIKPL-----ESWLKTYTVQVNEQELTICALPGVFSQTHLDAGT 183

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL+  +     NG+
Sbjct: 184 AVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGI 243

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 244 GSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 286

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 287 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQGFK-V 332

Query: 260 LLFC 263
           L  C
Sbjct: 333 LYAC 336


>gi|170060758|ref|XP_001865942.1| ybiN [Culex quinquefasciatus]
 gi|167879123|gb|EDS42506.1| ybiN [Culex quinquefasciatus]
          Length = 456

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 68/198 (34%), Gaps = 32/198 (16%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVV 99
             E++  +      RDF  + + L +    P    R    L ++     +L     R  +
Sbjct: 47  NREALQLLTRVLLRRDF-GLEVELPAGKLVPTLPLRLNYILWLEDV-EEALGWRRNRAEL 104

Query: 100 RILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           R LD+G G   +   L + +    +K VG++    ++E A+ N   NG++     ++   
Sbjct: 105 RGLDIGCGASCIYPLLGVARNRTRWKMVGLEKVRDSVESARGNVERNGLTGDVRVVEQKE 164

Query: 158 FSS-----------VEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGID---- 201
                         V   FD  + NPP Y +   V+         +P     G +D    
Sbjct: 165 GEETVIRGFLEGDGVGERFDFCMCNPPFYEQDHEVENRTG--HRPEPSAVSTGSMDELRT 222

Query: 202 -G--LSHYRTIADGVSRH 216
            G  L     I D     
Sbjct: 223 EGGELRFVEKIIDESLEL 240


>gi|302562051|ref|ZP_07314393.1| ribosomal RNA small subunit methyltransferase D [Streptomyces
           griseoflavus Tu4000]
 gi|302479669|gb|EFL42762.1| ribosomal RNA small subunit methyltransferase D [Streptomyces
           griseoflavus Tu4000]
          Length = 380

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 23/150 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +      R++DLG G G V  A     P  + + VD S +A+  A++   
Sbjct: 222 DIGTRFFLGHLPAPGGGRVVDLGCGNGVVGTATALADPRAEVLFVDESFQAVASAEATYR 281

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N V    +    D  + V +G  D++++NPP+                           
Sbjct: 282 ENDVPGHAEFRVGDGLTGVPDGSVDLVLNNPPFHSHQATTD------------------- 322

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             +  R +  G  R L   G   V IG   
Sbjct: 323 --ATARRMFAGARRTLRPGGELWV-IGNRH 349


>gi|228923065|ref|ZP_04086357.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228836563|gb|EEM81912.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 52/219 (23%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL     I   ++  +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIATKEKVISEALEKAGFTIEEVLR 300


>gi|218290024|ref|ZP_03494191.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
 gi|218239858|gb|EED07046.1| methyltransferase small [Alicyclobacillus acidocaldarius LAA1]
          Length = 199

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 31/163 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      +  ++    V  LDLG G G V   L +  P  +   +D++ +A+E+A+ N  
Sbjct: 42  DEGTRRLIESVDLTGAVSALDLGCGYGPVTAILARVYPGVQWWMIDVNRRAVELARRNTA 101

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                +             E  FD ++ NPP                            G
Sbjct: 102 D-IAPQPVVLQHDGIPPEFELRFDHVLLNPPIRA-------------------------G 135

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKV-----DVVRIFE 240
            +    + +   R L   G   V I            +  +FE
Sbjct: 136 KATVFRLYEEARRALKPGGKLWVVIQKKHGAPSTEVKLRELFE 178


>gi|323699539|ref|ZP_08111451.1| methyltransferase small [Desulfovibrio sp. ND132]
 gi|323459471|gb|EGB15336.1| methyltransferase small [Desulfovibrio desulfuricans ND132]
          Length = 253

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R        +P       +DS L  +   + +      LDLG G G V L LL   P  
Sbjct: 12  RRAYFPRGLVQPGGGYRFSLDSLLLAAFANVTRGQTG--LDLGCGCGVVALGLLLRQPGL 69

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPY 174
           +  GV+++  ++  A+ NA +   S++   +Q D      +G+ D +V+NPPY
Sbjct: 70  RLAGVELNPLSVRAAEENAASLHFSDKLSIIQGDVADWQPDGVVDFVVANPPY 122


>gi|239501749|ref|ZP_04661059.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB900]
          Length = 337

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 70/244 (28%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I +  K + +             + ++         P   ++  +D   
Sbjct: 129 SARHCQLWHLKIEKIEKIKPL-----ESWLKTYTVQVNEQELTICALPGVFSQTHLDVGT 183

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL+  +     NG+
Sbjct: 184 AVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGI 243

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 244 GSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 286

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 287 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQGFK-V 332

Query: 260 LLFC 263
           L  C
Sbjct: 333 LYAC 336


>gi|229192523|ref|ZP_04319485.1| Ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           10876]
 gi|228590947|gb|EEK48804.1| Ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           10876]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVHLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|126740647|ref|ZP_01756333.1| hypothetical protein RSK20926_16817 [Roseobacter sp. SK209-2-6]
 gi|126718162|gb|EBA14878.1| hypothetical protein RSK20926_16817 [Roseobacter sp. SK209-2-6]
          Length = 404

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +       +   +LD+ +  G   LA+ + +   +   VD S  ALE+A
Sbjct: 210 TGLFYDQRDNHAFAARLVPEDGEVLDVFSHVGGFGLAM-RAAGAAQVTCVDGSAAALELA 268

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              A  +G  + F   Q D F  +         FDV++ +PP                  
Sbjct: 269 GQGATASGFGDSFTARQGDAFEQLTALAEEGKRFDVVICDPPAFAPSKP----------- 317

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +L+    GL  Y  IA   +  +   G   +
Sbjct: 318 ---ALEA---GLRAYERIAKLAAPLVKPGGYLGL 345


>gi|152994142|ref|YP_001338977.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1]
 gi|226712959|sp|A6VRG3|RSMC_MARMS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150835066|gb|ABR69042.1| rRNA (guanine-N(2)-)-methyltransferase [Marinomonas sp. MWYL1]
          Length = 353

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            RILD G G G + L L       +   +D S  AL+  +     N VS+    + S+  
Sbjct: 210 ARILDFGCGDGIIALWL-HNKTGARITALDDSVMALKATELTFAANQVSDAVTLIASNGL 268

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLE 186
             V+G F+ +V+NPP+   V  D    E
Sbjct: 269 DEVKGRFNYVVTNPPFHSGVNTDYSIAE 296


>gi|84500215|ref|ZP_00998481.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597]
 gi|84392149|gb|EAQ04417.1| hypothetical protein OB2597_09744 [Oceanicola batsensis HTCC2597]
          Length = 257

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            +P+      VD         +  R    +LDLG G GA  L L +     +  G++   
Sbjct: 19  LQPKDGYRAGVDPVF--LAASVGARPGQSVLDLGCGAGAASLCLGRRVAGLRLTGLERQP 76

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
              E+A+ NA+ NG++  F+ ++ D       L    FD +++NPPY    
Sbjct: 77  VYAELARRNAIENGLA--FEVVEGDLSDMPTHLRQRSFDHVIANPPYFRRD 125


>gi|23099421|ref|NP_692887.1| ribosomal protein L11 methyltransferase [Oceanobacillus iheyensis
           HTE831]
 gi|38605313|sp|Q8EPW5|PRMA_OCEIH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|22777650|dbj|BAC13922.1| ribosomal protein L11 methyltransferase [Oceanobacillus iheyensis
           HTE831]
          Length = 315

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 70/215 (32%), Gaps = 52/215 (24%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y        + +T + + + P    EL+++              + L+      
Sbjct: 112 TAWKKYYKPVKISNRITITPTWEEYTPVSSDELIIELDPGMAFGTGTHPTTVLSIQGLEA 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+G G+G + +A  K     K    D+   A++  K N+  N + E     
Sbjct: 172 YVKPGDLVMDVGCGSGVLSIAAAKLGAD-KVNAYDLDEIAVKSTKLNSKLNQIHESVKVK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++    V+   DVIVSN                      ++               D  
Sbjct: 231 QNNLLEGVQQEADVIVSN---------------------ILA--------EIIVRFVDDA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLV 247
             +L   G      I  N+K  V+     +   ++
Sbjct: 262 WSNLKAGGYFITSGIIQNKKQLVIDNLTKQGFEVI 296


>gi|49475843|ref|YP_033884.1| ribosomal protein L11 methyltransferase [Bartonella henselae str.
           Houston-1]
 gi|49238651|emb|CAF27895.1| Ribosomal protein l11 methyltransferase [Bartonella henselae str.
           Houston-1]
          Length = 289

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 43/174 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++  +    LDLGTG+G + + +    P    +  DI   A+++A+ N   NG
Sbjct: 139 LKIIAKILQNENPQNALDLGTGSGILAIGIAMLKP-ISVLASDIDPVAIQVAQHNIQLNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V +   T+ +  F+  E      FD+IV+N   + + +++     V+             
Sbjct: 198 VKKYITTVTATGFNHDEIASRAPFDLIVAN--ILANPLIELAQEMVKA------------ 243

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVNAF 250
                          L K G   +     E    Q   V+  +  + L  +  +
Sbjct: 244 ---------------LQKGGSLILSGILKE----QHDHVLEAYVKQGLKHIETY 278


>gi|196009105|ref|XP_002114418.1| hypothetical protein TRIADDRAFT_50516 [Trichoplax adhaerens]
 gi|190583437|gb|EDV23508.1| hypothetical protein TRIADDRAFT_50516 [Trichoplax adhaerens]
          Length = 214

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 18/171 (10%)

Query: 102 LDLGTGTGAVCLALLK-ESPFFKGVGVDISCKALEIAKSNAVTN---GVSERFDTLQSDW 157
           +++G+G+GA+   + K   P    +  DI+  A       A  N           L S  
Sbjct: 45  IEVGSGSGAIISFISKILGPECYYMATDINPIAANCTIDTAKLNEMPQCEVIITDLVSGL 104

Query: 158 FSSVEGLFDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              + G  DVI+ NPPY+   S  +   G+E        S  GG +G      +   V +
Sbjct: 105 KDRLTGNVDVILFNPPYVVTPSKEISGNGIEA-------SWAGGENGREVMDRLFTIVPQ 157

Query: 216 HLNKDGLCSVE-IGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVLLFC 263
            L+  GL  +  I  N   ++++  +   L   ++ + K   G + + +  
Sbjct: 158 LLSPSGLFYLVAIKENYPDEIIKTMKMVGLSGEIILSRK--AGRENLFILR 206


>gi|229521141|ref|ZP_04410561.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
 gi|229341673|gb|EEO06675.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae TM
           11079-80]
          Length = 387

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 209 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 263

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 264 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 323

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 324 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 360

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 361 LARLF---GKSHVRVI---ANNSKFVILQ 383


>gi|229524300|ref|ZP_04413705.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
 gi|229337881|gb|EEO02898.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           bv. albensis VL426]
          Length = 387

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 209 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 263

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 264 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 323

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 324 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 360

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 361 LARLF---GKSHVRVI---ANNSKFVILQ 383


>gi|254418181|ref|ZP_05031905.1| Methyltransferase small domain family [Brevundimonas sp. BAL3]
 gi|196184358|gb|EDX79334.1| Methyltransferase small domain family [Brevundimonas sp. BAL3]
          Length = 249

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 19/176 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   R+ + G G GAV + +          G++    A  +A+ NA  N  ++R     
Sbjct: 42  PRSGDRLFEAGCGAGAVLMQIAARHAGVSLTGLERDSVAAGLARENADLNQSADRIRIFD 101

Query: 155 SDW---FSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGIDGLSHYRT 208
            D    F  ++   FD  VSNPP+ +          +R   P  + +     DGLS +  
Sbjct: 102 GDVADGFRPLDLPPFDWAVSNPPFFDD------PGALRAPAPGKQGAWMA-DDGLSAWTG 154

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGND--RVLL 261
           +     R   + G   +    ++  D++ +  E    F +   + +      RVL+
Sbjct: 155 LLLKAVR---EGGRIVIIHRADRLADLLTLLGEKAGSFAIRPVQPFADEPAKRVLV 207


>gi|254286033|ref|ZP_04960994.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150423943|gb|EDN15883.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|297580939|ref|ZP_06942864.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534765|gb|EFH73601.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|153826806|ref|ZP_01979473.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739393|gb|EDM53635.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|153801061|ref|ZP_01955647.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124123415|gb|EAY42158.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGARFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|302698175|ref|XP_003038766.1| hypothetical protein SCHCODRAFT_47265 [Schizophyllum commune H4-8]
 gi|300112463|gb|EFJ03864.1| hypothetical protein SCHCODRAFT_47265 [Schizophyllum commune H4-8]
          Length = 202

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 67/202 (33%), Gaps = 30/202 (14%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-----FK 123
              +EP  +T LL+D AL   +  +        L++G+G+G V   L K  P       +
Sbjct: 16  ESVYEPAEDTFLLLD-ALEADVSALRDMKPTVALEIGSGSGCVSAFLGKILPGVPLTLAQ 74

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +   I+                            + ++   D+++ NPPY+ +   +  
Sbjct: 75  VMLEPINAS--------------------FAFPLRARLKNSVDILLFNPPYVPTDSEEAY 114

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK--VDVVRIFES 241
             +     P  S  GG DG+         V   L+  G   + +   Q    D+     +
Sbjct: 115 YAQSGMTLP-GSWAGGTDGMQVTDLFLPDVPDLLSPHGRFYL-VAVKQNNIQDIASRMGA 172

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
             L      +   G + + +  
Sbjct: 173 LGLDCETVLQRRAGREHLFILR 194


>gi|206969854|ref|ZP_03230808.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH1134]
 gi|206735542|gb|EDZ52710.1| ribosomal protein L11 methyltransferase [Bacillus cereus AH1134]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPNEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|293364073|ref|ZP_06610809.1| methyltransferase small domain protein [Mycoplasma alligatoris
           A21JP2]
 gi|292552563|gb|EFF41337.1| methyltransferase small domain protein [Mycoplasma alligatoris
           A21JP2]
          Length = 262

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 23/156 (14%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +  +   ++L++GT  GA+ + +       K   ++I  KA E+A+ N 
Sbjct: 29  VDTILLGNYVFL-NKSTKKMLEIGTNNGALSIFIASRYKELKIDALEIQQKAAELAQINV 87

Query: 142 VTNGVSERFDTLQSD----WFSSVE---GLFDVIVSNPPYIE---SVIVDCLGLE--VRD 189
             N + ++ + +  D    W    +     +  IV NPP+     S I   +  E  +  
Sbjct: 88  KENNLEKQINVINQDFNVFWKEHSKKALKKYQSIVCNPPFYPYDKSKIKKNISQEKLIAT 147

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  ++LD           I  G S+ + + G  ++
Sbjct: 148 HEIYLNLD----------QIFAGSSKIIEQKGFITL 173


>gi|256847108|ref|ZP_05552554.1| ribosomal protein L11 methyltransferase [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715772|gb|EEU30747.1| ribosomal protein L11 methyltransferase [Lactobacillus coleohominis
           101-4-CHN]
          Length = 319

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 24/157 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD-----SALAFSLPRIEKRDVVR----------- 100
           W+ +Y+     S  T  P  E   LV+       L   +                     
Sbjct: 117 WQKYYHPVRVTSQLTVVPEWEDYQLVNPNEKTIILDPGMAFGTGTHPTTQLMLQALGTVV 176

Query: 101 -----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ++D+GTG+G + +A  K          D+   A+E AK N   N  +       +
Sbjct: 177 MGGESVIDVGTGSGVLAIA-AKLLGAGNVTAYDVDEVAVESAKRNVALNQQAADIQLGVN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
                +E   DVIV+N   +  +I+  +     +  P
Sbjct: 236 SLLDGIETQTDVIVAN--ILAEIILPLIPQAFANLWP 270


>gi|331701361|ref|YP_004398320.1| 50S ribosomal protein L11 methyltransferase [Lactobacillus buchneri
           NRRL B-30929]
 gi|329128704|gb|AEB73257.1| Ribosomal protein L11 methyltransferase [Lactobacillus buchneri
           NRRL B-30929]
          Length = 320

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 37/172 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ILD+GTG+G + +A  K     +    D+   A+E A+ N   N  ++      +
Sbjct: 177 QGGESILDVGTGSGVLSIA-AKLMGAGEIHAFDVDDIAVESAEKNIQLNPGAKGIHVAAN 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + +    D++V+N                      ++             +      
Sbjct: 236 DLLAGIHTQVDIVVAN---------------------ILA--------EIIVPLVPQAWD 266

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVLLFCR 264
           +L   G      I  ++   V     S++  ++     KD+ G    ++  +
Sbjct: 267 NLVPGGFFLTSGIIKDKFATVENAMTSQEFQIIETLRMKDWYG----VIAQK 314


>gi|108798335|ref|YP_638532.1| methyltransferase small [Mycobacterium sp. MCS]
 gi|119867432|ref|YP_937384.1| methyltransferase small [Mycobacterium sp. KMS]
 gi|108768754|gb|ABG07476.1| methyltransferase small [Mycobacterium sp. MCS]
 gi|119693521|gb|ABL90594.1| methyltransferase small [Mycobacterium sp. KMS]
          Length = 507

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 86/209 (41%), Gaps = 26/209 (12%)

Query: 56  GWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           G RDF+   ++   L S     R +  L +  A       + +  V R LDLGTG G   
Sbjct: 123 GQRDFFVVSDLDSALRSGAV--RRDHVLGIGGASVSLARAVVREPVGRALDLGTGCGIQA 180

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSN 171
           L L   S  ++ V  D + +AL +A + A  NG+S  +D      F  V G  FD+IVSN
Sbjct: 181 LHLDAHS--YQIVATDTNERALALAAATARLNGMS--WDLRCGSLFEPVAGERFDLIVSN 236

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC------SV 225
           PP++       +G   RD+   I  D G+ G +  R + + V  HL   G         V
Sbjct: 237 PPFV-------VGAGARDY---IYRDSGMVGDALCRNLIEQVGDHLEPGGTAHVMANWIV 286

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
             G + +  V        L      ++  
Sbjct: 287 RDGQDWRERVRGWLADTGLHAWVVQRELA 315


>gi|302390844|ref|YP_003826664.1| methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
 gi|302202921|gb|ADL11599.1| Methyltransferase type 11 [Acetohalobium arabaticum DSM 5501]
          Length = 256

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 12/119 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  SS+ F    +  LL D          E +   R++DLGTGTG + L L  ++  
Sbjct: 19  NLQIIQSSNHFAFAIDAVLLADFV--------EIKPKDRVIDLGTGTGVIPLLLTGKNDP 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
            + VG++I  K  E+A+ + + N + +  +  ++D     E      FDV+VSNPPY+ 
Sbjct: 71  DQIVGIEIQVKLAEMAQRSVLYNKLEDVIEIKKADIRQLKEVFAAESFDVVVSNPPYLP 129


>gi|289551714|ref|YP_003472618.1| putative O-methyltransferase [Staphylococcus lugdunensis HKU09-01]
 gi|289181245|gb|ADC88490.1| putative O-methyltransferase [Staphylococcus lugdunensis HKU09-01]
          Length = 241

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  + D F    +  LL            E R    I+DL +G G + L LL     
Sbjct: 15  NLKVIQNDDVFSFSTDALLL--------GYFTEVRKKDTIMDLCSGNGVIPL-LLSAKGT 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            +   ++I  + +++A+ +   N +  R      D   + +      + ++  NPPY + 
Sbjct: 66  QQIDAMEIQIQLVDMARRSFKYNHLENRLTLFHMDLKETTQYFKPSQYSLVTCNPPYFKI 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D               L + G   +     +   
Sbjct: 126 NQKHQHQKEAHKIARHEIMCTL---SD-------CMKAAQHLLKQGGRLMMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTEMRQVNIE 186


>gi|160915108|ref|ZP_02077321.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991]
 gi|158432907|gb|EDP11196.1| hypothetical protein EUBDOL_01116 [Eubacterium dolichum DSM 3991]
          Length = 221

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 15/160 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+AL     +I K +  R+LD+GT  GA+ LA           GV+I  +A E+A+ N  
Sbjct: 29  DTALLAEFMKINKGE--RVLDVGTNNGALLLA-ANRYEPSYLYGVEIQEEAAELARMNMR 85

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL-GLEVRDFDPRISLDGGID 201
            +G+    D L +D+  +     DV+V NPPY +      L   E        +      
Sbjct: 86  HHGI-VHADILCADYKEASLPAVDVVVCNPPYFKVGEHSHLNERESLKIARHEAY----- 139

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
            LS      +  S  L + G C +     +   V  +   
Sbjct: 140 -LSFPE-FCEKTSSLLAEKGRCYIVH---RAARVAELCTE 174


>gi|16331775|ref|NP_442503.1| hypothetical protein sll0487 [Synechocystis sp. PCC 6803]
 gi|1001736|dbj|BAA10573.1| sll0487 [Synechocystis sp. PCC 6803]
          Length = 402

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 33/152 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F L R      VRILD G GTG     L+  +P  +   VDIS  AL +A++    
Sbjct: 41  AAHNFCLGRRPANQKVRILDAGCGTGVGTEYLVHLNPEAEVHAVDISEGALAVAQTRLQK 100

Query: 144 NG-VSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +G V +R           + + G FD I S        ++  L   V           G 
Sbjct: 101 SGVVCDRVHFHHLSLENLAHLPGQFDYINSV------GVLHHLPDPV----------AG- 143

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV----EIG 228
                       V+  L   GL  +    EIG
Sbjct: 144 ---------IQAVAEKLAPGGLFHIFVYAEIG 166


>gi|291166399|gb|EFE28445.1| 50S ribosomal protein L11 methyltransferase [Filifactor alocis ATCC
           35896]
          Length = 313

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 11/111 (9%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+G G+G + + + K+        +D+   A+++AK N   N ++ +    + +     
Sbjct: 180 LDIGCGSGILSI-VAKKLGANIVEAIDLDPVAVKVAKENIEYNHLTGQIVVKEGNLLDES 238

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            GL+D++V+N   I +  +  L   VR       L    DG+     I   
Sbjct: 239 IGLYDIVVAN---IMADAIIMLIQSVR-------LFMNKDGMFIASGIISD 279


>gi|296418726|ref|XP_002838976.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634970|emb|CAZ83167.1| unnamed protein product [Tuber melanosporum]
          Length = 248

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 6/124 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           W   Y++      D +  +     +  +         +    V  ILD+  G G   +  
Sbjct: 44  WCQRYSLFTRYDEDVWITQNGWFEVTPEKVARKIADHVLGSPVETILDVFCGIGGNAIQF 103

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVS 170
              +   + + VD    A++ A+ NA   GV ++ + +  D F  +E        D +  
Sbjct: 104 ALSTSCKRVIAVDKDQTAIDCARHNARIYGVLDKIEFVVGDVFQLIEKQDPRLAADAVFM 163

Query: 171 NPPY 174
           +PP+
Sbjct: 164 SPPW 167


>gi|218899480|ref|YP_002447891.1| ribosomal protein L11 methyltransferase [Bacillus cereus G9842]
 gi|228967381|ref|ZP_04128415.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|226710052|sp|B7IYG5|PRMA_BACC2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|218543467|gb|ACK95861.1| ribosomal protein L11 methyltransferase [Bacillus cereus G9842]
 gi|228792307|gb|EEM39875.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDAIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|282850827|ref|ZP_06260201.1| GIY-YIG catalytic domain protein [Lactobacillus gasseri 224-1]
 gi|282557779|gb|EFB63367.1| GIY-YIG catalytic domain protein [Lactobacillus gasseri 224-1]
          Length = 338

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+    D F    +T LL          +I+  D  +++DL +G  A  + +      
Sbjct: 17  DLRIIQEKDAFSFSLDTLLL------GYFAQIKIHDNYKVVDLCSGNAAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                V+I     + A  +   N +  R +    +   + +      +D++V NPPY   
Sbjct: 70  AHYDAVEIQADMADQASRSIKLNKLENRIEVHCLNALEAPKKLGKDKYDMVVVNPPYFRV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHVINPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|206580995|ref|YP_002236476.1| methyltransferase family protein [Klebsiella pneumoniae 342]
 gi|229564331|sp|B5XTX7|RLMG_KLEP3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|206570053|gb|ACI11829.1| methyltransferase family protein [Klebsiella pneumoniae 342]
          Length = 376

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P    +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|169824475|ref|YP_001692086.1| ribosomal protein L11 methyltransferase [Finegoldia magna ATCC
           29328]
 gi|167831280|dbj|BAG08196.1| ribosomal protein L11 methyltransferase [Finegoldia magna ATCC
           29328]
          Length = 307

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 34/151 (22%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + + +  +    +    DI   A+E    NA  N +S   + +Q     +
Sbjct: 173 VLDIGCGSGILSV-VSSKLGAKEVFATDIDPLAIEATLENANLNKIS-NINAVQGSLLDN 230

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+  +DV+V+N           L                   L+    +   + + L KD
Sbjct: 231 VDKKYDVVVAN----------IL-------------------LNVLDILIPDLPKALKKD 261

Query: 221 GLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           G+      I  +QK ++V   E   L +V  
Sbjct: 262 GVFICSGLIN-SQKDNIVNTLEKNNLEIVEV 291


>gi|229507629|ref|ZP_04397134.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229512175|ref|ZP_04401654.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229519311|ref|ZP_04408754.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC9]
 gi|229607135|ref|YP_002877783.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
 gi|229344000|gb|EEO08975.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC9]
 gi|229352140|gb|EEO17081.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           B33]
 gi|229355134|gb|EEO20055.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae BX
           330286]
 gi|229369790|gb|ACQ60213.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           MJ-1236]
          Length = 387

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 209 YAITLTNLPNVY-----SGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 263

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 264 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 323

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 324 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 360

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 361 LARLF---GKSHVRVI---ANNSKFVILQ 383


>gi|255747013|ref|ZP_05420958.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262161445|ref|ZP_06030555.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
 gi|262168295|ref|ZP_06035992.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|229470423|sp|A5F5X3|RLMG_VIBC3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229470424|sp|Q9KPR9|RLMG_VIBCH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|255735415|gb|EET90815.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholera
           CIRS 101]
 gi|262023187|gb|EEY41891.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           RC27]
 gi|262028756|gb|EEY47410.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae
           INDRE 91/1]
          Length = 376

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 198 YAITLTNLPNVY-----SGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 253 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 312

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 313 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 349

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 350 LARLF---GKSHVRVI---ANNSKFVILQ 372


>gi|15642295|ref|NP_231928.1| hypothetical protein VC2297 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121726769|ref|ZP_01679987.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675117|ref|YP_001217810.1| hypothetical protein VC0395_A1886 [Vibrio cholerae O395]
 gi|153817877|ref|ZP_01970544.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821482|ref|ZP_01974149.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082421|ref|YP_002810972.1| Putative ribosomal RNA small subunit methyltransferase D [Vibrio
           cholerae M66-2]
 gi|254849425|ref|ZP_05238775.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500330|ref|ZP_07010135.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656861|gb|AAF95441.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121630803|gb|EAX63187.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126511585|gb|EAZ74179.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520975|gb|EAZ78198.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317000|gb|ABQ21539.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010309|gb|ACP06521.1| Putative ribosomal RNA small subunit methyltransferase D [Vibrio
           cholerae M66-2]
 gi|227014193|gb|ACP10403.1| Putative ribosomal RNA small subunit methyltransferase D [Vibrio
           cholerae O395]
 gi|254845130|gb|EET23544.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297541023|gb|EFH77077.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|288933472|ref|YP_003437531.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
 gi|288888201|gb|ADC56519.1| rRNA (guanine-N(2)-)-methyltransferase [Klebsiella variicola At-22]
          Length = 376

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P    +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|327399140|ref|YP_004340009.1| methyltransferase small [Hippea maritima DSM 10411]
 gi|327181769|gb|AEA33950.1| methyltransferase small [Hippea maritima DSM 10411]
          Length = 217

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 17/188 (9%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           +  +PR       +  +      +E +   RI+D G+G G + + +  ++P      ++ 
Sbjct: 12  EILQPRYGYHFSAEPFV--LTQNLEFKIPKRIVDFGSGCGIISVIVALKNPNSFIYAIEK 69

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + K ++I K N   N ++            +     D  +SNPPY        L  +  +
Sbjct: 70  NSKYIDIIKKNFKINKINNAIVLRDDREIETNS--IDYFISNPPYFMEGKF-RLSKKYLN 126

Query: 190 --FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
             F+      GG       +       R L   G         + ++++      K  + 
Sbjct: 127 EKFES----YGGE------KQFILYAKRLLKSKGTLRFTFHSTRLIEIIDTLRFNKFGIK 176

Query: 248 NAFKDYGG 255
                YG 
Sbjct: 177 TIQPVYGN 184


>gi|317126776|ref|YP_004093058.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
 gi|315471724|gb|ADU28327.1| methyltransferase small [Bacillus cellulosilyticus DSM 2522]
          Length = 240

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 33/226 (14%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            E +  + G + +    +    D F    +  LL              ++  +++DL +G
Sbjct: 1   MERLDYMPGKQRY----IYQRKDIFSFSMDAVLL-------GKFAKVPKEQGKVIDLCSG 49

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----G 163
            GA+ L L       K   V+I      +A+ +   NG+ E+ + +  +     +    G
Sbjct: 50  NGAIPLML-SVRTEAKIDAVEIQDILCSLAERSVSYNGLEEQINVINKNILHLQDEVEWG 108

Query: 164 LFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +D++  NPPY   + +D +           +   +L            +    SR + +
Sbjct: 109 TYDLVTCNPPYFPVIALDRINNNEKVSYARHEIACNL----------EDVIRISSRLVKQ 158

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR---VLLF 262
            G  ++     + V+++ +    +L        +   DR   ++L 
Sbjct: 159 TGRLAMVHRPERVVEIITLMTKYQLEPKRIQYVHPKKDREANMVLI 204


>gi|163852522|ref|YP_001640565.1| methyltransferase small [Methylobacterium extorquens PA1]
 gi|163664127|gb|ABY31494.1| methyltransferase small [Methylobacterium extorquens PA1]
          Length = 250

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 71/210 (33%), Gaps = 26/210 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L      PR       D+ L   L  +       + DLG  TGAV LA+ + S
Sbjct: 8   FLGGRLRLCQP---PRGAHRAGTDAVLLARL--LAPAPGATLYDLGAATGAVGLAVARLS 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVS 170
              + V V+     + +A+ NA  NG+  R   +++D  +               D++++
Sbjct: 63  EAGRVVLVERDTDLVALARENASANGLDGRVAVIEADLLAPGAQRRAAGLEPDSADIVLT 122

Query: 171 NPPYIESVI--VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           NPP+ E        +  +        +   G  GL  +       +  L   G   +   
Sbjct: 123 NPPFFEEGAHRPSPIPQKASAH----TFAAG--GLDLW---LRTCADLLRPGGRLGLIHR 173

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            +     +     R          +G  DR
Sbjct: 174 ADALPACLDALRGR-FGDCAVRPVHGRADR 202


>gi|325290540|ref|YP_004266721.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324965941|gb|ADY56720.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + + D+GTG+G + +A  K     K    DI   A+ IAK NA  N V  +      
Sbjct: 171 KPGMTVFDIGTGSGILAVAAAKL--GGKVQAGDIDALAVRIAKENAELNQVEGKVTVEAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           +     +G  DV+++N   +  VI++ L       +  ++ DG
Sbjct: 229 NLGDIFKGRADVVIAN--IVADVIIELLPQ----LENLMAEDG 265


>gi|56695236|ref|YP_165584.1| hypothetical protein SPO0321 [Ruegeria pomeroyi DSS-3]
 gi|56676973|gb|AAV93639.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 257

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 16/156 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F+PR      VD         +  +    +L+LG G GA  L+L    P     GV++  
Sbjct: 22  FQPRDGYRAGVDPVF--LAASVAAQTGQSVLELGCGAGAAILSLGARVPDLALTGVELQP 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEV 187
              ++A+ NA  N ++   D ++ D  +  + L    FD +++NPPY  +          
Sbjct: 80  GYADLARRNAAANDIA--LDVVEGDIAALPQALRQQSFDHVIANPPYYLAGSHSPASDAG 137

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           R      +L G    L+ +    D  +R L   G  
Sbjct: 138 R----ATAL-GERTPLALW---IDAAARRLTHRGYL 165


>gi|291298746|ref|YP_003510024.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
 gi|290567966|gb|ADD40931.1| methyltransferase small [Stackebrandtia nassauensis DSM 44728]
          Length = 200

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 15/149 (10%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G V +AL  ES   +   VD++ +A ++   NA   G  +R      +     
Sbjct: 65  LDLGCGYGPVTMALA-ESSGGEVTAVDVNERARQLTADNAHRLGFGDRVRVYAPEEVPP- 122

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              FD I SNPP    V  + L   + ++ PR+  D G+  L   R         L   G
Sbjct: 123 GQRFDEIWSNPPI--RVGKEALHELLLEWLPRLKPD-GVAWLVVARH---KGGDSLA--G 174

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             +      Q     +    +   ++   
Sbjct: 175 WLA-----GQGFPAEKHASQKGYRVLRVV 198


>gi|77406820|ref|ZP_00783852.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
 gi|77174574|gb|EAO77411.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
          Length = 254

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 27/191 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         +DS L    P++  R +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FASTKTN 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              + +++     ++AK +   N + ++   +  D  + ++ +     D+++ NPPY ++
Sbjct: 70  ATIIEIELQESLADMAKRSIKLNKLEKQVTMINDDLKNLLDHVQRSNVDLMLCNPPYFKA 129

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  L         +   +L          R I       L   G  ++    ++ +
Sbjct: 130 SETSKKNLSPHYLLARHEITTNL----------REICQIAQHTLKTKGRIAMVHRPDRFL 179

Query: 234 DVVRIFESRKL 244
           +++       L
Sbjct: 180 EIIDTMRQFNL 190


>gi|316965198|gb|EFV49983.1| putative methyltransferase METT10D [Trichinella spiralis]
          Length = 422

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 24/166 (14%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            +DF  + + +  D+  PR    L     L          + VR +D+G+G   +   L 
Sbjct: 20  KKDF-GLSIEIPPDSLVPRIPGRLNYIHWLQDLAASHFPDESVRCIDIGSGASCIYPLLG 78

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---------EGLFDV 167
            +   +K + V+    A+E A+ N + N +      ++ D   ++         E +   
Sbjct: 79  AKVCGWKFIAVEKLPDAIECARKNVMKNNLQNLISVVEVDGPINLYNVVEQLGAEMICSF 138

Query: 168 IVSNPPYI-------------ESVIVDCLGLEVRDFDPRISLDGGI 200
            + NPP+               S         V   +   + DGG 
Sbjct: 139 CMCNPPFFDSQRKEGPGNLSSPSRRPAPHSCTVGRHEEMFA-DGGE 183


>gi|297588454|ref|ZP_06947097.1| ribosomal protein L11 methyltransferase [Finegoldia magna ATCC
           53516]
 gi|297573827|gb|EFH92548.1| ribosomal protein L11 methyltransferase [Finegoldia magna ATCC
           53516]
          Length = 307

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 34/155 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+G G+G + +A  K     +    DI   A+E    NA  N +S     ++  
Sbjct: 169 DNKSVLDIGCGSGILSVASSKLGAK-EVFATDIDPLAIEATLDNAQLNKIS-NIKAVEGS 226

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+  +DV+++N           L                   L+    +   + + 
Sbjct: 227 LLDKVDKKYDVVIAN----------IL-------------------LNVLDILIPDLPKA 257

Query: 217 LNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           L KDG+      I  +Q+ +++ I E   L +V  
Sbjct: 258 LEKDGVFICSGLIN-SQRDNIINILEKNNLEIVEI 291


>gi|121534803|ref|ZP_01666623.1| ribosomal protein L11 methyltransferase [Thermosinus
           carboxydivorans Nor1]
 gi|121306598|gb|EAX47520.1| ribosomal protein L11 methyltransferase [Thermosinus
           carboxydivorans Nor1]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 30/129 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTG+G + +   K         VD+   A+ +A  NA  NGVS      Q 
Sbjct: 172 KPGDVVFDVGTGSGILAVVAAKLGAGA-VYAVDLDPVAVNVAVENASVNGVSHVVKVAQG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  +   G  DV+V+N                      I+             +   V +
Sbjct: 231 DLLTGFTGTADVVVAN---------------------IIA--------DVIIRLVKDVPQ 261

Query: 216 HLNKDGLCS 224
            L + G+  
Sbjct: 262 KLKEGGVFI 270


>gi|47567877|ref|ZP_00238585.1| ribosomal protein L11 methyltransferase [Bacillus cereus G9241]
 gi|47555554|gb|EAL13897.1| ribosomal protein L11 methyltransferase [Bacillus cereus G9241]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGNTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVTVG 230

Query: 154 QSDWFSSVEGLFDVIVSN 171
           Q+     +EG  D+IV+N
Sbjct: 231 QNSLLEGIEGPVDLIVAN 248


>gi|116618301|ref|YP_818672.1| O-methyltransferase [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097148|gb|ABJ62299.1| Predicted O-methyltransferase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 254

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 29/193 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +  + D F    +  LL   A       ++ +     +DLG+GTGAV L      P 
Sbjct: 19  NINIIQNPDMFSYSLDAILLAHFA------DVKGKGKGLSVDLGSGTGAVGLFYA---PK 69

Query: 122 F--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVE-GLFDVIVSNPPYI 175
              +   V+I  +  E+A+ +   N + ER   +Q+   D F+ ++ G  + I++NPPY 
Sbjct: 70  VTGEIKLVEIQPELAEMAQRSIELNNLHERVSVVQADMKDIFNEIKPGSVETILTNPPYF 129

Query: 176 ESVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                         E+   +  I+L            +A   ++ L  +G   +     +
Sbjct: 130 PLTETTKTNIDKHYEIARHELMINL----------PELAQIANKLLKNNGKVYMVHRPER 179

Query: 232 KVDVVRIFESRKL 244
             D+   F +RKL
Sbjct: 180 LADIFAAFAARKL 192


>gi|313836356|gb|EFS74070.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA2]
 gi|314928821|gb|EFS92652.1| methyltransferase small domain protein [Propionibacterium acnes
           HL044PA1]
 gi|314971302|gb|EFT15400.1| methyltransferase small domain protein [Propionibacterium acnes
           HL037PA3]
          Length = 261

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 22/122 (18%)

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LG G G +   L +  P  +    D+S +A++  +  A  NG+S              + 
Sbjct: 126 LGCGNGVISAHLAQRLPHARVHATDVSWQAVDSTRLTADANGLSI-VTHWCDGLADLPDD 184

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              V+V+NPP+             +D  P ++             +    +R L+  G  
Sbjct: 185 SVGVVVTNPPFHRGT--------AQDHAPTVA-------------MLTDAARALHPGGTL 223

Query: 224 SV 225
             
Sbjct: 224 WC 225


>gi|291276853|ref|YP_003516625.1| hypothetical protein HMU06260 [Helicobacter mustelae 12198]
 gi|290964047|emb|CBG39887.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 258

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 12/163 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS   ++  R   R    +LD+G G+G + L   ++        V+       +A+ NA 
Sbjct: 20  DSLFLYAFARNFLRKKFSLLDVGAGSGILGLLCARDFA-ISATLVEKDAHNAFLAQQNAA 78

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           TN +    +  Q D+        +DVI+SNPP+  S I+D     ++    R +      
Sbjct: 79  TNQLEA--EVYQGDFLDFCSSERYDVILSNPPFYRSEILDSQNKRIQTA--RNARF---- 130

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
               +  +     + L+  G         +   + +  ++   
Sbjct: 131 --LPFEALCKKAKQLLSPKGNFIFCYDAKESHHIFQTLQNCGF 171


>gi|284803095|ref|YP_003414960.1| hypothetical protein LM5578_2852 [Listeria monocytogenes 08-5578]
 gi|284996236|ref|YP_003418004.1| hypothetical protein LM5923_2801 [Listeria monocytogenes 08-5923]
 gi|284058657|gb|ADB69598.1| hypothetical protein LM5578_2852 [Listeria monocytogenes 08-5578]
 gi|284061703|gb|ADB72642.1| hypothetical protein LM5923_2801 [Listeria monocytogenes 08-5923]
          Length = 257

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPVRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 66  GIIPL-LLSTRTETQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 124

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 125 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 175 GKANFVHRPERLLDIIDIMRKYRL 198


>gi|127511702|ref|YP_001092899.1| methyltransferase small [Shewanella loihica PV-4]
 gi|262828704|sp|A3QAZ2|TRMN6_SHELP RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|126636997|gb|ABO22640.1| methyltransferase small [Shewanella loihica PV-4]
          Length = 243

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 17/141 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G G+G + L +  +        ++I   A +  + N   +  S+R  
Sbjct: 29  WAPLTQAKTILDIGAGSGLLSL-MAAQRSEAVIQALEIDPLAAQDCQHNIDQSPWSDRIT 87

Query: 152 TLQSDWF-------SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            +Q+D         +  +  FD I+ NPPY ++               + +     D L+
Sbjct: 88  LIQADLLQWYPLAQTQAQTQFDHILCNPPYFDNGPQSQCS--------KRAQARHTDSLA 139

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               +   + + L   G  S+
Sbjct: 140 F-DQLLSAIKQLLAPTGKASL 159


>gi|269960527|ref|ZP_06174899.1| Ribosomal RNA large subunit methyltransferase G [Vibrio harveyi
           1DA3]
 gi|269834604|gb|EEZ88691.1| Ribosomal RNA large subunit methyltransferase G [Vibrio harveyi
           1DA3]
          Length = 416

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           N++L    + +     +   +D    F L  + +   ++ I+DLG G G + + + + +P
Sbjct: 230 NIQLKNLPNVY-----SGESLDLGARFMLQHLPQDPELKNIIDLGCGNGVLSIKMGQLNP 284

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
                 VD S  A+E A+ N + N    R  + + ++     +     +++ NPP+ +  
Sbjct: 285 KAHLTCVDESFMAVESARQNLIANLGEGRDIECIANNCLDDFKPESACLVMCNPPFHQQQ 344

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + LN+ G   V     +GY+    
Sbjct: 345 AITD----------HIAW-----------QMFCDSKQILNQGGKLLVIGNRHLGYD--AK 381

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + LV
Sbjct: 382 LKRLFGDKNVKLV 394


>gi|262042669|ref|ZP_06015823.1| ribosomal RNA small subunit methyltransferase D [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|259039894|gb|EEW41011.1| ribosomal RNA small subunit methyltransferase D [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
          Length = 376

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P    +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|42783439|ref|NP_980686.1| ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           10987]
 gi|60390503|sp|Q730M3|PRMA_BACC1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|42739368|gb|AAS43294.1| ribosomal protein L11 methyltransferase [Bacillus cereus ATCC
           10987]
          Length = 312

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQQGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|15672085|ref|NP_266259.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           lactis Il1403]
 gi|38605462|sp|Q9CJ97|PRMA_LACLA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|12722948|gb|AAK04201.1|AE006248_9 methyltransferase [Lactococcus lactis subsp. lactis Il1403]
          Length = 317

 Score = 68.2 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    DI   A+ +A  N   N   E+     +
Sbjct: 170 RGGETLLDVGTGSGVLSVA-ASYLGAAEIFAYDIDEVAVRVALENIELNPGHEKIHVSAN 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   DVIV+N                      ++             + +   R
Sbjct: 229 NLLEGIDKKADVIVAN---------------------ILA--------DILVLMTEDAFR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            + ++G   +  I  ++   V+   E    FL
Sbjct: 260 LVKEEGYLIMSGIIADKADMVIASAEKAGFFL 291


>gi|238896608|ref|YP_002921353.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|238548935|dbj|BAH65286.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 376

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P    +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|86156674|ref|YP_463459.1| 50S ribosomal protein L11P methyltransferase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85773185|gb|ABC80022.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 287

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 64/174 (36%), Gaps = 39/174 (22%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     +  R    +LD+GTG+G + +A  ++    +  G D    A+ +A+ NA  NG
Sbjct: 137 LAGLSELLAARPGASVLDVGTGSGLLAIA-ARKLGAGRVTGNDNDPVAVAVARENAARNG 195

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V E    L      ++ G FDV+V+N   I +  +  L  E                   
Sbjct: 196 VPE--VALTEAALPAIGGAFDVVVAN---ILANTLVELAPE------------------- 231

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
                  ++  L   G   +  I   Q+ +V   + +  L          G DR
Sbjct: 232 -------IAARLAPGGAVLLSGILTPQEDEVRAAYLALGLRP------LAGGDR 272


>gi|34540837|ref|NP_905316.1| hypothetical protein PG1104 [Porphyromonas gingivalis W83]
 gi|81833778|sp|Q7MVG0|TRMN6_PORGI RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|34397151|gb|AAQ66215.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
          Length = 255

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A++            LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  
Sbjct: 31  AWAGEDAAGSIPQHCLDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPF 90

Query: 147 SERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGG 199
           S+R      D   S          FD+IVSNPP+ +S +        +   +  + L   
Sbjct: 91  SDRIVIASGDILDSSLESLIGNQRFDLIVSNPPFFKSSMHAPDRQRTMARHEETLPL--- 147

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +    S  L+  G  ++    ++  D+ 
Sbjct: 148 -------EKLICRASELLSPQGRLALITPRDRLKDLR 177


>gi|327304100|ref|XP_003236742.1| hypothetical protein TERG_03786 [Trichophyton rubrum CBS 118892]
 gi|326462084|gb|EGD87537.1| hypothetical protein TERG_03786 [Trichophyton rubrum CBS 118892]
          Length = 431

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 24/183 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL--------LVDSALAFSLPRIEKRDVVRILDLGTGT 108
            RDF  + + L  D   P     L        L+D               V  LD+GTG+
Sbjct: 51  RRDF-GLDVELPDDRLCPPVPNRLNYILWLQDLIDCTGDDFYKGFNADRDVVGLDIGTGS 109

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L        +  V  DI  K L+ A+ N   N +  R   + S     +      
Sbjct: 110 SCIYPLLGAVHRKRWTFVATDIDEKNLQYARQNVQRNNLQSRIQVVDSVPDGPLIPLDRI 169

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-------SHYRTIADGV 213
              + D  + NPP+ ES        E +  +P     G    +       +  + I    
Sbjct: 170 QLKMLDFTMCNPPFYESHEEMKQLAEEKQNEPLSVCTGAETEMITPGGEVAFVKKIIQES 229

Query: 214 SRH 216
              
Sbjct: 230 LDL 232


>gi|296504806|ref|YP_003666506.1| 50S ribosomal protein L11 [Bacillus thuringiensis BMB171]
 gi|296325858|gb|ADH08786.1| ribosomal protein L11 [Bacillus thuringiensis BMB171]
          Length = 312

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDAIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|197334549|ref|YP_002155201.1| methyltransferase [Vibrio fischeri MJ11]
 gi|262828790|sp|B5F9T8|TRMN6_VIBFM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|197316039|gb|ACH65486.1| methyltransferase [Vibrio fischeri MJ11]
          Length = 234

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 1/89 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +  +ILD+G GTG + L   + +       +++   A E+A+ N   +   ER  
Sbjct: 31  WTNISECSQILDIGAGTGLLSLMSAQRNSNAHIDAIELMPIAAEVARLNFSQSPWKERLV 90

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
            +  D+ S      +D I+ NPPY  +  
Sbjct: 91  LIHQDFLSYQTAYEYDAIICNPPYFNNGE 119


>gi|167622798|ref|YP_001673092.1| methyltransferase small [Shewanella halifaxensis HAW-EB4]
 gi|262828701|sp|B0TUD3|TRMN6_SHEHH RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|167352820|gb|ABZ75433.1| methyltransferase small [Shewanella halifaxensis HAW-EB4]
          Length = 246

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G G+G + L +  +    K   +++   A    + N   +  SER +
Sbjct: 29  WAPLVQAKTILDIGAGSGLLSL-MAAQRSQAKITAIELDNDAALDCQQNFDASHWSERLE 87

Query: 152 TLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +  D  +  +      FD I+ NPPY  +            F    +     D LS   
Sbjct: 88  IICCDIQAYCQREQARQFDHIICNPPYFANGPQSS------KF--SRATARHTDSLSF-D 138

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
            +   + + L  +G  S+ +       +  I  +  L L +
Sbjct: 139 ALLQAIKQLLAPEGQASLILPTESVSLLEAILSTYNLRLCH 179


>gi|300812615|ref|ZP_07093028.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
 gi|300496396|gb|EFK31505.1| ribosomal protein L11 methyltransferase [Lactobacillus delbrueckii
           subsp. bulgaricus PB2003/044-T3-4]
          Length = 314

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 32/151 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + + D+GTG+G + +A   +      +  DIS +++  A+ NA  NG+ +     ++ 
Sbjct: 176 KPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAEENAALNGIHD-IALQKTS 233

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + V+G FD+IV+N                      ++             +   +  H
Sbjct: 234 LLADVDGKFDLIVAN---------------------ILA--------EILLDLIPQLDSH 264

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           LN+DG      I Y Q   + +        +
Sbjct: 265 LNEDGQVIFSGIDYLQLPKIEQALAENCFQI 295


>gi|261211414|ref|ZP_05925702.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. RC341]
 gi|260839369|gb|EEX65995.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. RC341]
          Length = 407

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + L    + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 229 YAITLANLPNVY-----SGESLDLGARFMLEHLPSDPALEDFIDLGCGNGVLSVRLGQLN 283

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P      VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 284 PQASITCVDESFMAIASAQKNLANNLGERSVHCVTNNCLDQFPAQSSSMIVCNPPFHQQQ 343

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 344 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 380

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 381 LARLF---GKSHVRVI---ANNSKFVILQ 403


>gi|257068242|ref|YP_003154497.1| 16S rRNA m(2)G 1207 methyltransferase [Brachybacterium faecium DSM
           4810]
 gi|256559060|gb|ACU84907.1| 16S rRNA m(2)G 1207 methyltransferase [Brachybacterium faecium DSM
           4810]
          Length = 204

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 13/145 (8%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALL 116
            ++ L  SS  F  R      +D A A  L R++          I+DLG G G + L   
Sbjct: 26  RDLDLVSSSSVFSGRG-----LDKATAVLLDRLDEITAPPAGATIVDLGCGWGPIALTAA 80

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
              P  +   VD+S +A E+   NA   G+ E    L  +     + + D + SNPP   
Sbjct: 81  LLHPDAQVWAVDVSSRARELTAENAQRAGL-ENVRVLAPEEVPE-DLVVDALWSNPPI-- 136

Query: 177 SVIVDCLGLEVRDFDPRISLDGGID 201
            +    L   +R++  R++  G  D
Sbjct: 137 RIGKQALHALLREWTARLAPHGTAD 161


>gi|144899041|emb|CAM75905.1| Cyclopropane fatty acid synthase and related methyltransferases
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 403

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 27/170 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +R F +  L  S   F    ++      A     + +++ +D   +LD+G G G + L++
Sbjct: 131 FRLFLDDDLQYSCAYFHSPEDSLEQAQVAKKRHIIAKLDIKDGQSVLDIGCGWGGMALSI 190

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            + +     +GV +S + LE+A+  A   G+++R      D +  ++  FD IVS     
Sbjct: 191 ARAA-DVTVLGVTLSKEQLEVARRRAEQAGLADRVRFELLD-YRKLKDKFDRIVS----- 243

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      V  F+      G      HYR     V   L +DG+  V
Sbjct: 244 -----------VGMFE----HVGPP----HYRQYFRKVRDLLTEDGVALV 274


>gi|290511477|ref|ZP_06550846.1| ribosomal RNA large subunit methyltransferase G [Klebsiella sp.
           1_1_55]
 gi|289776470|gb|EFD84469.1| ribosomal RNA large subunit methyltransferase G [Klebsiella sp.
           1_1_55]
          Length = 376

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I DLG G G + L  L ++P    +  D S  A+  ++ N  
Sbjct: 212 DIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVE 271

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R + + ++  S +E   F  I+ NPP+ +   +             I+    
Sbjct: 272 RNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   V +G        ++  +  
Sbjct: 319 --------QMFNDARRSLKYGGELYV-VGNRHLDYFRKLKRAFG 353


>gi|254487436|ref|ZP_05100641.1| methyltransferase small [Roseobacter sp. GAI101]
 gi|214044305|gb|EEB84943.1| methyltransferase small [Roseobacter sp. GAI101]
          Length = 249

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR      VD  L      +  +   R+L+LG G GA  L L    P     GV++  
Sbjct: 22  WQPRKGYRAGVDPVL--LAATVPAQAGQRVLELGCGVGAASLCLGARVPGLTLTGVELQP 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N         F+ +++D      +  +  FD +++NPPY +           
Sbjct: 80  AYAALARRN------GPDFEVVEADLAQMPLAVRQRQFDHVLANPPYFDRDASIASQDAA 133

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           R+    ++L G    L  +  I    ++ L   G      
Sbjct: 134 RE----VAL-GERTPLEIWVQI---AAKRLAPKGQAHFIH 165


>gi|297572232|ref|YP_003698006.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
 gi|296932579|gb|ADH93387.1| methyltransferase small [Arcanobacterium haemolyticum DSM 20595]
          Length = 496

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 24/162 (14%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLGTG G    A++           DIS +AL+ A+ NA  NGV+          F  
Sbjct: 154 VLDLGTGCGI--HAIIAAKAGAHATATDISQRALDYAQFNARLNGVTINTRI--GSLFEP 209

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDF----DPRISLDGGIDGLSHYRTIADGVSR 215
           V G  F V+VSNPP++ +        +VRD     + R   DGG  G +   T+  G+  
Sbjct: 210 VAGETFSVVVSNPPFVIT------PSDVRDSVGTLEYR---DGGAPGDTLAATVVAGLDA 260

Query: 216 HLNKDGLCSV------EIGYNQKVDVVRIFESRKLFLVNAFK 251
           H+  DG   +      E G+         F       +   +
Sbjct: 261 HVAPDGNAYMLANWEIEAGHEWNEHPQAWFAQTNADAIVIQR 302


>gi|312115017|ref|YP_004012613.1| methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100]
 gi|311220146|gb|ADP71514.1| Methyltransferase type 11 [Rhodomicrobium vannielii ATCC 17100]
          Length = 255

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +P+P     +D+           +   R+L+ G G GA  L LL   P     GV+I 
Sbjct: 19  VRQPKPGFRSGLDAVF--LAAACPAQAGERVLEAGCGAGAASLCLLARVPGVSVTGVEID 76

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNPPYIESV 178
                +A+ NA  N ++ +F    +D  +S   L         +D +++NPP+ E  
Sbjct: 77  AGLAALARENATENDLAAQFTIANADLTASWTELEAAGLFREAYDHVIANPPFFEHG 133


>gi|313639878|gb|EFS04585.1| methyltransferase small domain-containing protein [Listeria
           seeligeri FSL S4-171]
          Length = 250

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK + V N +  + + ++ D     +      
Sbjct: 59  GIIPL-LLSTRTEAQIVGVEIQPRLADMAKRSVVYNELESQIEIIEHDLKKITDIIPKER 117

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY    +  +       R    +   +L                 S  L + 
Sbjct: 118 ADIVTCNPPYFAGPATSLKNENEHYRIARHEVMCTL----------EDTIRVASNLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 168 GKANFVHRPERLLDILDLMRKYRL 191


>gi|310826525|ref|YP_003958882.1| ribosomal protein L11 methyltransferase [Eubacterium limosum
           KIST612]
 gi|308738259|gb|ADO35919.1| ribosomal protein L11 methyltransferase [Eubacterium limosum
           KIST612]
          Length = 314

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 29/191 (15%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKR 96
           W+ +Y        + +     +  PE + +V +                L  +      R
Sbjct: 114 WKKYYKPTRVGKSIIIKPTWEDYTPEVDEIVVNMDPGMAFGTGTHETTQLCVTKLEEYIR 173

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD+G GTG + + +  E      +GVD    A+++A+ N   N + ++ +  + +
Sbjct: 174 PDDMVLDIGCGTGILSI-IAGELGCRHVIGVDFDPVAVKVARENIALNHMEDKIEIREGN 232

Query: 157 WFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                + +   ++IV+N      ++ + +    R   P +  DG            + V 
Sbjct: 233 LLDVIAEDEKAEIIVAN------ILAEAIIELARMIKPYLKEDGVFISSGIINDRLEAVL 286

Query: 215 RHLNKDGLCSV 225
           + LN +G   +
Sbjct: 287 KTLNDEGFEVL 297


>gi|257876732|ref|ZP_05656385.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
 gi|257810898|gb|EEV39718.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
          Length = 278

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 81/197 (41%), Gaps = 27/197 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS+ F    +  LL + A      R+ KR V  I+DL  G GAV L + K++  
Sbjct: 49  DIKIIQSSEVFSFSLDAVLLANYA------RVPKRGV--IVDLCAGNGAVGLFISKKT-T 99

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVE-GLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N + ++      D    F  ++    D++V NPPY ++
Sbjct: 100 AHIYQIELQERLADMAQRSIELNDLQDQLTVYPMDLKNLFQKIKPDSVDLLVCNPPYFKN 159

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           V            +   +   +LD           +    S+ L  +G  ++    ++ +
Sbjct: 160 VPTAIKNPNPYLAIARHEITTTLD----------EVIQTASKALKMNGRFAMVHRPDRFL 209

Query: 234 DVVRIFESRKLFLVNAF 250
           D++    + ++      
Sbjct: 210 DILDHMRAHRIAPKRVR 226


>gi|330890549|gb|EGH23210.1| HemK family modification methylase [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 314

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 62/163 (38%), Gaps = 18/163 (11%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             D+    P+T     S       +     + R +D+G GTGA  L +    P  +   V
Sbjct: 107 DEDSVFFGPDTYRFAHSINRHL--QGTSHSISRAVDIGGGTGAGALLIAVARPQAQVYAV 164

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KAL  A+ NA   G+ E      SD  S + G FD+IV+NPPY++           
Sbjct: 165 DINPKALHFAQINARVAGL-ENMQCCHSDILSGLTGNFDLIVANPPYMKDA--------- 214

Query: 188 RDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCSVEIG 228
                R +   G D L       I       L   G   +  G
Sbjct: 215 ----NRRAYRHGGDALGADLSVRILRESLDRLTPGGSLVLYTG 253


>gi|332559004|ref|ZP_08413326.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N]
 gi|332276716|gb|EGJ22031.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides WS8N]
          Length = 291

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  
Sbjct: 149 PAKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAG 208

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F   +      FD++ +N   I    +  L   +              GL+         
Sbjct: 209 FDHPDIAAAAPFDLVFAN---ILKGPLIELAPAMAAH------VAPGGGLAIL------- 252

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   +   + ++   L    +D G
Sbjct: 253 ------SGLLVV-----QADSITEAYLAQGFELAQ-REDLG 281


>gi|224418458|ref|ZP_03656464.1| SAM dependent methyltransferase [Helicobacter canadensis MIT
           98-5491]
 gi|253827774|ref|ZP_04870659.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313141990|ref|ZP_07804183.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
 gi|253511180|gb|EES89839.1| putative O-methyltransferase [Helicobacter canadensis MIT 98-5491]
 gi|313131021|gb|EFR48638.1| methyltransferase small [Helicobacter canadensis MIT 98-5491]
          Length = 230

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 23/207 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++    D +    +T  L D AL +  P+ +      +L++G+G+G + L   KE    
Sbjct: 1   MQIYQPKDGYCYNSDTLFLYDFALKYFKPKKQ------VLEVGSGSGVLGLLCAKEV-EM 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               ++ + K LE+ + N   NGV  +        ++ ++  FD I+SNPP+  + ++  
Sbjct: 54  DLTMIEKNPKMLELCQHNLRINGVEAKLMGGDFLEYNFLDLKFDYILSNPPFYHNGVIRS 113

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++        L    + L    ++   ++  L   G         +   V  I    
Sbjct: 114 KNKDIC-------LARYEENLPFS-SMVKKINALLKPQGEFIFCYDSRESFKVFGILFEF 165

Query: 243 KLFLVNAFKDYGGNDR-----VLLFCR 264
           K+  +        + R      LL CR
Sbjct: 166 KIRPIIVRYV---HPRENEEATLLLCR 189


>gi|332852274|ref|ZP_08434079.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013150]
 gi|332870497|ref|ZP_08439261.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013113]
 gi|332729404|gb|EGJ60744.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013150]
 gi|332732234|gb|EGJ63502.1| methyltransferase small domain protein [Acinetobacter baumannii
           6013113]
          Length = 339

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 70/244 (28%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I +  K + +             + ++         P   ++  +D   
Sbjct: 131 SARHCQLWHLKIEKIEKIKPL-----ESWLKTYTVQVNGQELTICALPGVFSQTHLDVGT 185

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL+  +     NG+
Sbjct: 186 AVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGI 245

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 246 GSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 288

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 289 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQGFK-V 334

Query: 260 LLFC 263
           L  C
Sbjct: 335 LYAC 338


>gi|169794820|ref|YP_001712613.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii AYE]
 gi|215482367|ref|YP_002324549.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB307-0294]
 gi|301345439|ref|ZP_07226180.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB056]
 gi|301510342|ref|ZP_07235579.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB058]
 gi|301595020|ref|ZP_07240028.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB059]
 gi|226712932|sp|B7GWT8|RSMC_ACIB3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|226712981|sp|B0V4Z1|RSMC_ACIBY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169147747|emb|CAM85610.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii AYE]
 gi|213987470|gb|ACJ57769.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii AB307-0294]
          Length = 337

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 70/244 (28%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I +  K + +             + ++         P   ++  +D   
Sbjct: 129 SARHCQLWHLKIEKIEKIKPL-----ESWLKTYTVQVNGQELTICALPGVFSQTHLDVGT 183

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL+  +     NG+
Sbjct: 184 AVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGI 243

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 244 GSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 286

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 287 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQGFK-V 332

Query: 260 LLFC 263
           L  C
Sbjct: 333 LYAC 336


>gi|77464128|ref|YP_353632.1| 50S ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388546|gb|ABA79731.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides 2.4.1]
          Length = 291

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  
Sbjct: 149 PAKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAG 208

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F   +      FD++ +N   I    +  L   +              GL+         
Sbjct: 209 FDHPDIAAAAPFDLVFAN---ILKGPLIELAPAMAAH------VAPGGGLAIL------- 252

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   +   + ++   L    +D G
Sbjct: 253 ------SGLLVV-----QADSITEAYLAQGFELAQ-REDLG 281


>gi|257082205|ref|ZP_05576566.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           E1Sol]
 gi|257416412|ref|ZP_05593406.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           AR01/DG]
 gi|256990235|gb|EEU77537.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           E1Sol]
 gi|257158240|gb|EEU88200.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           ARO1/DG]
          Length = 315

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 54/213 (25%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ +Y+       + +  S + + P+ E E ++      +                  
Sbjct: 112 TAWKKYYHPVRVTRFLTIVPSWEAYHPQDEAEKIITLDPGMAFGTGTHPTTRLTLQALET 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDT 152
             R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++     
Sbjct: 172 VLRGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHV 229

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +D    ++   DVIV+N                      ++             + + 
Sbjct: 230 SANDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIED 260

Query: 213 VSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
             R L +DG   +  I  ++K  V+        
Sbjct: 261 AWRLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|110668776|ref|YP_658587.1| protein methyltransferase [Haloquadratum walsbyi DSM 16790]
 gi|109626523|emb|CAJ52986.1| protein methyltransferase [Haloquadratum walsbyi DSM 16790]
          Length = 212

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 23/186 (12%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KG 124
            + +  ++P  ++ LL D+        I ++   R+L++GTG+G V      +     + 
Sbjct: 20  KIETTVYQPAEDSALLADA--------IHEQGRGRLLEVGTGSGWVATTTAADVDAVTEI 71

Query: 125 VGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
           V  D++  A   A   A ++  +      +Q D  +  +   F+ +  NPPY+ +   D 
Sbjct: 72  VASDLNPHACHAAAQRAASSDDTTTPVSVIQGDLLTPFDANSFETVAFNPPYLPT-DPDV 130

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYNQKVDVVRI 238
              +  +     +L GG  G        D ++R L  DG+  V +    GY    +V+R 
Sbjct: 131 EWDDWMEH----ALSGGPSGREVIEPFIDSLNRVLAPDGIGLVLVSSLAGY---EEVIRY 183

Query: 239 FESRKL 244
            E+   
Sbjct: 184 IETAGF 189


>gi|251782858|ref|YP_002997161.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
 gi|242391488|dbj|BAH81947.1| methyltransferase [Streptococcus dysgalactiae subsp. equisimilis
           GGS_124]
          Length = 284

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 72/196 (36%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  + D F         +DS L    P++  + +  I+DL +G GAV L        
Sbjct: 45  DVRIIQNKDVFSYS------IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTK 95

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
              V V++  +  ++ + +   N + ++   +  D  + +  +     D+++ NPPY +S
Sbjct: 96  AAIVEVELQERLADMGQRSIQLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKS 155

Query: 178 VI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                  +         +   +L            I       L  +G  ++    ++ +
Sbjct: 156 HESSKKNVSEHYLLARHEVTTNL----------EEICQVARHALKSNGRLAMVHRPDRFL 205

Query: 234 DVVRIFESRKLFLVNA 249
           +++    +  L     
Sbjct: 206 EIIDSLRANGLAPKRV 221


>gi|229495928|ref|ZP_04389654.1| ribosomal protein L11 methyltransferase [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317241|gb|EEN83148.1| ribosomal protein L11 methyltransferase [Porphyromonas endodontalis
           ATCC 35406]
          Length = 306

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 55/173 (31%), Gaps = 44/173 (25%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
              L+  L         R+LD+G GTG + +A        +   VDI   A+E A+ NA 
Sbjct: 150 QMMLSLLLEEHSALAHARVLDVGCGTGVLGIAAALLGAE-RVSFVDIDATAVENARHNAE 208

Query: 143 TNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            NG+       +      +     FD +++N                             
Sbjct: 209 LNGLRVPCSFYEGILEELALDTASFDCLLAN----------------------------- 239

Query: 201 DGLSHYRTIA-DGVSRH---LNKDGLCSVEIGYNQKVD---VVRIFESRKLFL 246
                +R I    + R+   L+  GL  V  G+ Q  D   +    E     L
Sbjct: 240 ----IHRNIILHDLPRYKTLLSPGGLLLV-SGFYQGEDEQIITSALERMGFAL 287


>gi|11993696|gb|AAG42853.1|AF323753_8 SnogM [Streptomyces nogalater]
          Length = 278

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 24/139 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                RIE     R+LD+G GTGA  + L + +   + VG+ IS + + +A ++A   GV
Sbjct: 53  EMMTERIEVGPGQRVLDIGCGTGAPAVQLARAT-GAEVVGITISPEQVRLATAHAEREGV 111

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +ER     +D  + +    D                    V  F+    L    D L+  
Sbjct: 112 AERVTFRCADASAELPFPADSF----------------DAVWFFESIFHL---PDRLTAL 152

Query: 207 RTIADGVSRHLNKDGLCSV 225
           R      +  L   G  ++
Sbjct: 153 RR----AAEVLRPGGRLAL 167


>gi|311894173|dbj|BAJ26581.1| putative methyltransferase [Kitasatospora setae KM-6054]
          Length = 221

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 22/164 (13%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              +  + +T LL+D      L R   R   R LD+GTG     LAL       +   VD
Sbjct: 7   PGVYPAQGDTALLLD-----VLSREPLRPGARCLDIGTG--CGALALAAARRGCRVTAVD 59

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVD 181
           +S  +L  A  NA  + +  R     +D   +         G +D+++SNPPY+ +    
Sbjct: 60  LSRLSLATAWLNARLHRLPLRVR--HADLLPARPRDGPGPGGGYDLVLSNPPYVPAPSPG 117

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 R      + D G DG      +   V   L   G   +
Sbjct: 118 PPPGAAR------AWDAGSDGRLLLDRLCRRVPPLLAPGGTLLL 155


>gi|308069956|ref|YP_003871561.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Paenibacillus
           polymyxa E681]
 gi|305859235|gb|ADM71023.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Paenibacillus
           polymyxa E681]
          Length = 324

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 38/206 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK--------------RDVVRILDLGTGT 108
           + +  + + + P  E E +++     +                    +    ++D+GTG+
Sbjct: 130 LTIKPTWEEYVPASEEEKIIELDPGMAFGTGTHPTTSLCLRTLESVIKGGEEVIDVGTGS 189

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + +    +      + +D+   A+  A+ N   NG+ ER    +SD  S +       
Sbjct: 190 GILAIG-AVKLGAKHVLALDLDPVAVSSARENTRLNGLEERITIKESDLLSVLNA----- 243

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
            S+P     + V  +   +                       D V + L   G   +  G
Sbjct: 244 -SDPTLGIQLPVKLVVANILA--------------EIILLFIDDVYKALEPGG-IYIASG 287

Query: 229 -YNQKVDVVR-IFESRKLFLVNAFKD 252
            +  K +VV    ++    +    +D
Sbjct: 288 IWKNKEEVVETALKAAGFEIAEISRD 313


>gi|330447453|ref|ZP_08311102.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328491644|dbj|GAA05599.1| 16S rRNA m2G1207 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 340

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 22/126 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +  + P       DIS  A+E AK     N +        +D + 
Sbjct: 202 KVLDFGCGAGVIGAVMKAKYPAIDLELCDISALAIESAKETFKVNNLEAS-KFTATDVYK 260

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           ++ G +  ++SNPP+            ++ F             +      +   ++LN 
Sbjct: 261 TLTGPYQFLISNPPFHAG---------LKTF------------YAATEQFIEQAPQYLNP 299

Query: 220 DGLCSV 225
            G   +
Sbjct: 300 QGQMVI 305


>gi|262831299|sp|B2RK25|TRMN6_PORG3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 255

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A++            LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  
Sbjct: 31  AWAGEDPAGSIPQHCLDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPF 90

Query: 147 SERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGG 199
           S+R      D   S          FD+IVSNPP+ +S +        +   +  + L   
Sbjct: 91  SDRIVIASGDILDSSLESLIGNQRFDLIVSNPPFFKSSLHAPDRQRTMARHEETLPL--- 147

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +    S  L+  G  ++    ++  D+ 
Sbjct: 148 -------EKLICRASELLSPQGRLALITPRDRLKDLR 177


>gi|218710465|ref|YP_002418086.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
 gi|218323484|emb|CAV19661.1| 16S RNA methylase RsmC [Vibrio splendidus LGP32]
          Length = 340

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 38/174 (21%)

Query: 55  LGWRDFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           +G +   ++ +      F   +    ++LL+D     +LP+++     ++LD G G G +
Sbjct: 167 IGEQ---SLTVKSLPGVFSHGQFDVGSQLLLD-----TLPKLKG----KVLDFGCGAGVL 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +    P  +    DIS  A+  +++    NG++       SD +S     +  I+SN
Sbjct: 215 GAVMASRHPDIELEMCDISAFAVASSQATLEANGLTGNVFA--SDVYSDTSKDYQFIISN 272

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+   +       E                     T+      H+ + G   +
Sbjct: 273 PPFHSGLDTSYSATE---------------------TLLAQAPNHMKRSGEMII 305


>gi|194753253|ref|XP_001958931.1| GF12312 [Drosophila ananassae]
 gi|190620229|gb|EDV35753.1| GF12312 [Drosophila ananassae]
          Length = 308

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 59  DFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +++++ +  +  +  P    R    L ++  L        K D ++ +D+G G+  +   
Sbjct: 67  EYFDLNVDFAPGSLVPTLALRLNYILWIEDLLESF-----KLDQIKGIDIGCGSSCIYSL 121

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSD-------WFSS--VEGL 164
           L  +   +K + ++   + +E A+ N   N + +  +   Q D       +F     E +
Sbjct: 122 LGAKKNNWKMLALESKPENIEYARENVKRNHLEDLVEVFAQPDNTCIFKSYFEQDTKEQM 181

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +   + NPP+ +S   +  G   R+ + R +
Sbjct: 182 YHFCLCNPPFFDSNSPNPFGANTRNPERRPA 212


>gi|86148148|ref|ZP_01066447.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222]
 gi|85834065|gb|EAQ52224.1| 16S RNA G1207 methylase RsmC [Vibrio sp. MED222]
          Length = 340

 Score = 67.8 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 38/174 (21%)

Query: 55  LGWRDFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           +G +   ++ +      F   +    ++LL+D     +LP+++     ++LD G G G +
Sbjct: 167 IGEQ---SLTVKSLPGVFSHGQFDVGSQLLLD-----TLPKLKG----KVLDFGCGAGVL 214

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              +    P  +    DIS  A+  +++    NG++       SD +S     +  I+SN
Sbjct: 215 GAVMASRHPDIELEMCDISAFAVASSQATLEANGLTGNVFA--SDVYSDTSKDYQFIISN 272

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+   +       E                     T+      H+ + G   +
Sbjct: 273 PPFHSGLDTSYSATE---------------------TLLAQAPNHMKRSGEMII 305


>gi|301300458|ref|ZP_07206658.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300851955|gb|EFK79639.1| methyltransferase small domain protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 203

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 35/182 (19%)

Query: 62  NVRLTLSSDTFEP---RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           N+  T  +  F        T +L+++  A         D  +ILD+G G G + L++ K 
Sbjct: 27  NIHFTTDNGVFSKNTVDFGTRVLLETIDANL-----DLDNKKILDMGCGYGPIGLSIAKA 81

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
            P  +   VD++  ALE+AK NA  N ++       S +    E  +D+I++NPP     
Sbjct: 82  YPNSQVDMVDVNELALELAKKNAANNNINNVKIFKSSQYEDINETDYDLIITNPPIRA-- 139

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV--DVV 236
                                  G      I  G  +HLN  G     I   Q     + 
Sbjct: 140 -----------------------GKDVVHGILAGSKQHLNLGGSIVAVIQKKQGAPSAIK 176

Query: 237 RI 238
           ++
Sbjct: 177 KL 178


>gi|308064266|gb|ADO06153.1| hypothetical protein HPSAT_07255 [Helicobacter pylori Sat464]
          Length = 238

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D    FS P I+  D   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD----FSRPFIKNSDA--ILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFKPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              E++      S       L    ++A  V + L   G    
Sbjct: 118 ---EIKGHARHQSE------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|57651368|ref|YP_185417.1| hypothetical protein SACOL0529 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160180|ref|YP_493173.1| hypothetical protein SAUSA300_0464 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194244|ref|YP_499036.1| hypothetical protein SAOUHSC_00457 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151220663|ref|YP_001331485.1| hypothetical protein NWMN_0451 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161508733|ref|YP_001574392.1| hypothetical protein USA300HOU_0487 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142321|ref|ZP_03566814.1| hypothetical protein SauraJ_11912 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253735220|ref|ZP_04869385.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
 gi|258452832|ref|ZP_05700827.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|262049972|ref|ZP_06022831.1| hypothetical protein SAD30_0200 [Staphylococcus aureus D30]
 gi|262052518|ref|ZP_06024715.1| hypothetical protein SA930_1939 [Staphylococcus aureus 930918-3]
 gi|282925560|ref|ZP_06333213.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|284023496|ref|ZP_06377894.1| hypothetical protein Saura13_02844 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294850346|ref|ZP_06791079.1| hypothetical protein SKAG_02437 [Staphylococcus aureus A9754]
 gi|304380503|ref|ZP_07363180.1| methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|4454321|emb|CAA10787.1| hypothetical protein [Staphylococcus aureus]
 gi|57285554|gb|AAW37648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126154|gb|ABD20668.1| Methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201802|gb|ABD29612.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150373463|dbj|BAF66723.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160367542|gb|ABX28513.1| possible methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253726780|gb|EES95509.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
 gi|257859518|gb|EEV82371.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|259159565|gb|EEW44612.1| hypothetical protein SA930_1939 [Staphylococcus aureus 930918-3]
 gi|259161907|gb|EEW46490.1| hypothetical protein SAD30_0200 [Staphylococcus aureus D30]
 gi|269940058|emb|CBI48434.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282592464|gb|EFB97476.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|294822770|gb|EFG39206.1| hypothetical protein SKAG_02437 [Staphylococcus aureus A9754]
 gi|302750377|gb|ADL64554.1| O-methyltransferase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340948|gb|EFM06871.1| methyltransferase [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|315196168|gb|EFU26524.1| possible methyltransferase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320139428|gb|EFW31306.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|329313205|gb|AEB87618.1| Possible methyltransferase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729762|gb|EGG66159.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 241

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 29/197 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++     +   
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVH---RAER 172

Query: 235 VVRIFESRKLFLVNAFK 251
           ++ +    +   +   K
Sbjct: 173 LMDVLFEMRKVNIEPKK 189


>gi|109896410|ref|YP_659665.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica
           T6c]
 gi|123361452|sp|Q15ZS7|RSMC_PSEA6 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|109698691|gb|ABG38611.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudoalteromonas atlantica
           T6c]
          Length = 343

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 35/179 (19%)

Query: 54  ILGWRDF-----YNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           I  W+D       ++   +      F         +D+     L  I++    RILD   
Sbjct: 158 ITKWQDVSEHQVADISFKVCSLPGVFSHGE-----LDTGTQLLLDNIDRVVSGRILDFAC 212

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G +      ++P  + V  D+S  A+  ++ +A  NGV  +   + S+   ++ G F 
Sbjct: 213 GAGIIGCFAGLKNPQAQVVMSDVSALAIYCSQKSAELNGVKAQV--IPSNGLGALTGKFA 270

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +NPP+   +  D                      S        +  HL   G   +
Sbjct: 271 QVFTNPPFHTGIKTD---------------------YSVTEGFMQQLKNHLQDRGSLIL 308


>gi|284037300|ref|YP_003387230.1| methyltransferase small [Spirosoma linguale DSM 74]
 gi|283816593|gb|ADB38431.1| methyltransferase small [Spirosoma linguale DSM 74]
          Length = 248

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 10/149 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           V+ +LD+GTGTG + L + + +P      V++   A   A  N   +  + R   +QS  
Sbjct: 40  VINLLDIGTGTGLLALMVAQRNPMASIDAVEVDDAAYSQAIQNVGASPFANRIQVMQSRI 99

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                   +D I++NPP+  + +        R      +L     G   +  + + V R 
Sbjct: 100 QDYRPAIRYDRILTNPPFYTNHLRSPDAAVNR------AL---HTGDLPFPELVETVVRL 150

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
           +   G   V +   +   +  +     L+
Sbjct: 151 MQPTGQWWVLLPPYETDLLAELARKAGLY 179


>gi|14590192|ref|NP_142257.1| hypothetical protein PH0266 [Pyrococcus horikoshii OT3]
 gi|3256655|dbj|BAA29338.1| 247aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 247

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 74/201 (36%), Gaps = 27/201 (13%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           LD++ R   +N   R L ++++ ++L     +++ +          P +         + 
Sbjct: 27  LDEKGRLDFSNREARILYNKAVAKVL-----FDLDIEYHPKGLVTPPISR--------YI 73

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +   R   ++L++GTG  A+   + ++         ++  +    AK N   N  + R
Sbjct: 74  FLKTFLRGGEKVLEIGTGHTALMSLIAEKVFKCDVTATELDNEFYSYAKLNIARN--NSR 131

Query: 150 FDTLQSDWFS-----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              L+S              FDVI S PPY E      L         R +L GG  G  
Sbjct: 132 IKLLKSSGGIIRGVVPRGERFDVIFSAPPYYEKHSGGVLTE-------REALGGGKFGEE 184

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               + +    +LN  G  ++
Sbjct: 185 FSIKLLNEALDYLNAGGKVAL 205


>gi|313678696|ref|YP_004056436.1| methyltransferase small domain-containing protein [Mycoplasma bovis
           PG45]
 gi|312950166|gb|ADR24761.1| methyltransferase small domain protein [Mycoplasma bovis PG45]
          Length = 261

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 70/167 (41%), Gaps = 22/167 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              + R+L++GT  GA+ + + + +   K   ++I  KA ++A SN + N   ++   + 
Sbjct: 44  NHKIKRMLEIGTNNGALSIFISERNKNLKIDAIEIQEKAAQLASSNVILNNKQDQITVIT 103

Query: 155 SDWFSS-------VEGLFDVIVSNPP---YIESVIVDCLGLEVR--DFDPRISLDGGIDG 202
           +D+          V+  ++ IV NPP   Y +S I   +  E+     + +++L      
Sbjct: 104 ADFNDFYKEHTKLVKPKYEAIVCNPPFYVYDKSKISKSISEELLIATHEVKLNL------ 157

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                 I  G ++ + + G  ++ I   + VD   +    K      
Sbjct: 158 ----EQIISGSAKIIEQKGYLTLVIPAERLVDCFCLMRQYKFEPKRV 200


>gi|317495350|ref|ZP_07953720.1| ribosomal protein L11 methyltransferase [Gemella moribillum M424]
 gi|316914772|gb|EFV36248.1| ribosomal protein L11 methyltransferase [Gemella moribillum M424]
          Length = 311

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 31/154 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+G G+G + +A            VD+   A+++++ N   N +  R +  ++
Sbjct: 174 KPHDNVIDVGCGSGILSIA-ASYLTDGNLKAVDLDKLAVDVSRENFALNNLENRIEVEEA 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +     +DVIV+N               +                     + +   +
Sbjct: 233 SLLTKETKKYDVIVAN---------------ILAH--------------IIELMLEDAYK 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
            L   G      I  ++K +++     +   LV 
Sbjct: 264 LLEDGGYFITSGIIKDKKDELLEKMLEQGFKLVE 297


>gi|254380765|ref|ZP_04996131.1| methyltransferase [Streptomyces sp. Mg1]
 gi|194339676|gb|EDX20642.1| methyltransferase [Streptomyces sp. Mg1]
          Length = 218

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFD 151
           +     V  LD+G G+G   +ALL      +   +DI+  +      N + NG+   R  
Sbjct: 10  VPDLTGVNALDIGAGSGLYSVALLAAGAE-RVTALDINPASATQTAVNVMANGLDSTRLT 68

Query: 152 TLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            + S     + +  FD++++NPP++            R      +L     G + Y ++ 
Sbjct: 69  CVTSPLEEYTPDERFDLVITNPPHLPYD-----PSYARKDGLETALVARRGGRAVYDSVV 123

Query: 211 DGVSRHLNKDGLCSVEI 227
           + V   L   G   +  
Sbjct: 124 ERVDTLLAPGGTLLMAH 140


>gi|187251168|ref|YP_001875650.1| methyltransferase family protein [Elusimicrobium minutum Pei191]
 gi|186971328|gb|ACC98313.1| Methyltransferase family protein [Elusimicrobium minutum Pei191]
          Length = 261

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 56/148 (37%), Gaps = 31/148 (20%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-EIAKS---- 139
            L   L  +      ++LD+G G+GA+ +   K  P  K  G+D    AL + AK     
Sbjct: 80  VLDNVLNHLNWDGNGKLLDVGCGSGAMVIKAAKRFPNAKITGMD-YWGALWDYAKEQCEN 138

Query: 140 NAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           NA   GVS+R    + D       +  FD +VSN  +           EV+    +++L 
Sbjct: 139 NAKIEGVSDRVHFQKGDAAKLDFADAEFDAVVSNFVF----------HEVKTQPDKVAL- 187

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          V R +   G+ S 
Sbjct: 188 ------------IKEVLRVIKPGGVFSF 203


>gi|163938042|ref|YP_001642926.1| methyltransferase [Bacillus weihenstephanensis KBAB4]
 gi|229131042|ref|ZP_04259955.1| hypothetical protein bcere0014_210 [Bacillus cereus BDRD-ST196]
 gi|163860239|gb|ABY41298.1| conserved hypothetical protein, possible methyltransferase
           [Bacillus weihenstephanensis KBAB4]
 gi|228652379|gb|EEL08303.1| hypothetical protein bcere0014_210 [Bacillus cereus BDRD-ST196]
          Length = 246

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   + L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVIPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   N ++ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGIRSVQYNNLAERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|238852607|ref|ZP_04643017.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
 gi|238834753|gb|EEQ26980.1| methyltransferase domain protein [Lactobacillus gasseri 202-4]
          Length = 338

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+    D F    +T LL          +I+  D  +++DL +G  A  + +      
Sbjct: 17  DLRIIQEKDAFSFSLDTLLL------GYFAQIKIHDNYKVVDLCSGNAAASIYM-SYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                V+I     + A  +   N    R +    +   + +      +D++V NPPY + 
Sbjct: 70  AHYDAVEIQADMADQASRSIKLNKFENRIEVHCLNALEAPKKLGKDKYDMVVVNPPYFKV 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  + +      +L      L+     I    S  L   G   +  
Sbjct: 130 PKGHVINPDEKK-----ALARHE--LAINLEQIIKVSSDMLKMKGKMFMVH 173


>gi|313885608|ref|ZP_07819358.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619338|gb|EFR30777.1| methyltransferase small domain protein [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 251

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L     ++        +D  +G G + L L ++S      G++I  + +++A+ +  
Sbjct: 37  DAVLLADFIKLPHSRPFHYIDFCSGNGVIPLLLARKSHSP-LTGLEIQSELVDMARRSVA 95

Query: 143 TNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYI----ESVIVDCLGLEVRDFDPRIS 195
            N + ++   ++ D       +   +D++  NPPY        +       +   +  ++
Sbjct: 96  LNDLGDKVSFIEGDLKDFTRPLGIQYDIVSCNPPYFIVANSQEVHHQSSHAIARHEILLT 155

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +D                 + +   G   +    ++  D+         
Sbjct: 156 MD----------DWVLKAKQVMRDRGKLYIVHRPDRLDDLFTTLLKYGF 194


>gi|260771195|ref|ZP_05880122.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
 gi|260613792|gb|EEX38984.1| ribosomal RNA small subunit methyltransferase C [Vibrio furnissii
           CIP 102972]
          Length = 340

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 43/183 (23%)

Query: 54  ILGWR------DFYNVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           ILG         +++  LT+      F   E    + LL+D     +LP ++     ++L
Sbjct: 155 ILGEWFKSYAVQYHHHTLTVRSLPGVFSHGEFDMGSRLLLD-----TLPPLQG----KVL 205

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D G G G +   +    P       DIS  A+  ++     NG+S R     SD +S   
Sbjct: 206 DFGCGAGVLGGVMAMLYPNIALEMCDISALAIRSSQETLAANGLSGRVFA--SDVYSDTA 263

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             +  IV+NPP+   +       E                     T+      HL + G 
Sbjct: 264 SDYQFIVTNPPFHAGLDTSYNATE---------------------TLLAKAPAHLQRQGQ 302

Query: 223 CSV 225
             V
Sbjct: 303 LVV 305


>gi|259417980|ref|ZP_05741899.1| ribosomal protein L11 methyltransferase [Silicibacter sp.
           TrichCH4B]
 gi|259346886|gb|EEW58700.1| ribosomal protein L11 methyltransferase [Silicibacter sp.
           TrichCH4B]
          Length = 289

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 71/192 (36%), Gaps = 41/192 (21%)

Query: 73  EPRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLK 117
            P  +  LL+++A+AF                    E     ++ D+G GT  + +A  +
Sbjct: 109 VPGDKIPLLIEAAMAFGTGHHGTTLGCLKALDHLLGEGLKGEKVADIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  + +  DI   A+++A++N   NG+    + L++  F +            P +++
Sbjct: 169 VWPEAQILASDIDQVAVDVAEANMEANGMKGAVECLEAAGFDA------------PALKA 216

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVV 236
                L        P ++L             +  ++ HL   G   +  I   Q  DV+
Sbjct: 217 AAPYDLIFANILKGPLVAL-------------SPDIAAHLRDGGYAILSGILNEQADDVI 263

Query: 237 RIFESRKLFLVN 248
            ++    + LV 
Sbjct: 264 SVYAQNGINLVK 275


>gi|227499799|ref|ZP_03929894.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098]
 gi|227218103|gb|EEI83371.1| possible methyltransferase [Anaerococcus tetradius ATCC 35098]
          Length = 233

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 30/194 (15%)

Query: 72  FEPRPETELL---------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + PR   +++         VDS +     R++   V   LD+G G+G +   +       
Sbjct: 6   YIPRTNIKMIHVDKSYSFGVDSIILGDFARMKSNKVA--LDIGAGSGVLSFLINSRYKLE 63

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIE-SVI 179
           K   V+I  +  ++ + N   NG+    + +  D    +  E   D I++NPPY + +  
Sbjct: 64  KVFAVEIQKEKAKLLEENIKLNGIK-NIELINEDLNKIIIKENSIDYIITNPPYYKITDN 122

Query: 180 VDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
           ++    E      +  + L    D       I    ++ L   G   +     +   +V 
Sbjct: 123 IENKDEEFLISRQEKFLKL---SD-------IFSFANKALKDKGKLFMIH---KPERMVD 169

Query: 238 IFESRKLFLVNAFK 251
           IF           +
Sbjct: 170 IFNQSGNLKAKTVR 183


>gi|117925507|ref|YP_866124.1| rRNA (guanine-N(2)-)-methyltransferase [Magnetococcus sp. MC-1]
 gi|229564333|sp|A0L9S5|RLMG_MAGSM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|117609263|gb|ABK44718.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Magnetococcus sp. MC-1]
          Length = 369

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 44/127 (34%), Gaps = 22/127 (17%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             +++DLG G G + +A L+ +P    + VD S +A    + N       E F  +    
Sbjct: 225 PDQVVDLGCGNGVLSIAALQRNPNSHVLAVDESWQATRSCQINLERVRTPEHFKVVWGHS 284

Query: 158 FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            S +EG   D+++ NPP+ +   +                            +     R 
Sbjct: 285 LSFIEGMQADLVLCNPPFHQHQTLTD---------------------DIAWCMFKDAHRV 323

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 324 LKPGGRL 330


>gi|260433423|ref|ZP_05787394.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417251|gb|EEX10510.1| SAM-dependent methyltransferase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 402

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 57/154 (37%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +           +LD+ +  G   LA+L        + VD S  AL +A
Sbjct: 209 TGLFYDQRPNHAFAARLAGPGAHVLDVFSHVGGFGLAMLAGGAD-HALSVDGSAAALTLA 267

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +  AV +G  +RF+T Q D F  +         FDV++ +PP                  
Sbjct: 268 EQGAVASGFGDRFETRQGDAFDVLTQLGEAGAQFDVVICDPPAFAPS------------- 314

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +LD    GL  Y  IA   +  +   G   +
Sbjct: 315 -KQALDA---GLRAYERIARLAAPLVKPGGYLGL 344


>gi|126642861|ref|YP_001085845.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 17978]
          Length = 246

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 71/244 (29%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I ++ K + +             + ++         P   ++  +D   
Sbjct: 38  SARHCQLWHLKIEKTEKIKPL-----ESWLKTYTVQVNEQELTICALPGVFSQTHLDVGT 92

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL+  +     NG+
Sbjct: 93  AVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSRNGI 152

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 153 GSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 195

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 196 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQGFK-V 241

Query: 260 LLFC 263
           L  C
Sbjct: 242 LYAC 245


>gi|239787602|emb|CAX84070.1| Ribosomal protein L11 methyltransferase [uncultured bacterium]
          Length = 283

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 25/137 (18%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLV-----DSA------------LAFSLPRIE 94
           W++ Y+      RL +     EP    E LV     + A            L        
Sbjct: 88  WKESYHPLPVGQRLLVVPSWLEPPESGERLVLRMDPEMAFGSGAHATTRGCLELLEEVAG 147

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++ + R+LDLGTG+G + +           V  D+   A+E A+ NA  NGV+ R   ++
Sbjct: 148 QKGLGRVLDLGTGSGVLAIWAAMLGADG-VVATDLDPVAVETAERNARLNGVAGRVTVVE 206

Query: 155 SDWFSSVEGLFDVIVSN 171
           S    +  G +  IV+N
Sbjct: 207 SALVPA--GRYRTIVAN 221


>gi|212225087|ref|YP_002308323.1| Hypothetical DNA methylase [Thermococcus onnurineus NA1]
 gi|212010044|gb|ACJ17426.1| Hypothetical DNA methylase [Thermococcus onnurineus NA1]
          Length = 203

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 2/109 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L +    +       I DLG GTG +  A        +   V+I  +AL +A+ N 
Sbjct: 32  VAAELLWLAHSLGDIGGKVIADLGAGTGVLS-AGACLMGAERVYAVEIDEEALRVARENI 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            + G+ +  + + SD         D ++ NPP+   V        +R F
Sbjct: 91  ESLGIEDCVEFVNSDVLD-FSARVDTVIMNPPFGSQVKHADRPFLMRAF 138


>gi|319651612|ref|ZP_08005739.1| ribosomal protein L11 methyltransferase [Bacillus sp. 2_A_57_CT2]
 gi|317396679|gb|EFV77390.1| ribosomal protein L11 methyltransferase [Bacillus sp. 2_A_57_CT2]
          Length = 313

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 70/219 (31%), Gaps = 52/219 (23%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +YN      R T+      + P    EL+++              + +       
Sbjct: 112 TAWKKYYNPVKISERFTIVPTWEDYTPVSSDELIIELDPGMAFGTGTHPTTVMCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   +++D+GTG+G + +A        K   +D+   A+  AK N   N V +  +  
Sbjct: 172 TVKQGDKVVDVGTGSGVLSIAAAMLGAE-KVKALDLDEVAVNSAKLNIKLNKVQDIVEVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q +    V    DV+V+N                      ++               D V
Sbjct: 231 QGNLLDGVSQGADVVVAN---------------------ILA--------EVILRFTDDV 261

Query: 214 SRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +  + + G   +  I   +K +V     +    +    +
Sbjct: 262 ASVVKEGGHFIASGIIQQKKQEVRDAISAAGFEVEETIQ 300


>gi|258424478|ref|ZP_05687357.1| methyltransferase [Staphylococcus aureus A9635]
 gi|257845347|gb|EEV69382.1| methyltransferase [Staphylococcus aureus A9635]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|253730953|ref|ZP_04865118.1| methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|282915804|ref|ZP_06323572.1| hypothetical protein SATG_02630 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283768922|ref|ZP_06341831.1| methyltransferase small [Staphylococcus aureus subsp. aureus H19]
 gi|253725303|gb|EES94032.1| methyltransferase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|282320295|gb|EFB50637.1| hypothetical protein SATG_02630 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283461103|gb|EFC08189.1| methyltransferase small [Staphylococcus aureus subsp. aureus H19]
 gi|298693816|gb|ADI97038.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302332200|gb|ADL22393.1| O-methyltransferase [Staphylococcus aureus subsp. aureus JKD6159]
 gi|323438719|gb|EGA96459.1| hypothetical protein SAO11_2412 [Staphylococcus aureus O11]
 gi|323442069|gb|EGA99704.1| hypothetical protein SAO46_2028 [Staphylococcus aureus O46]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|114561846|ref|YP_749359.1| methyltransferase small [Shewanella frigidimarina NCIMB 400]
 gi|122300753|sp|Q087P4|TRMN6_SHEFN RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|114333139|gb|ABI70521.1| methyltransferase small [Shewanella frigidimarina NCIMB 400]
          Length = 251

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
             E      ILD+G G+G + L   + SP     + V+I   A +  + N   +  SE  
Sbjct: 29  WAELTQSSHILDIGAGSGLLSLMAAQRSPHHTSIIAVEIDNAAAKACQFNIKQSPWSETV 88

Query: 151 DTLQSDWFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                           + E LFD I+ NPPY E                  +     + L
Sbjct: 89  QLFHGAIQDFQQRHNNNDEPLFDHIICNPPYFEQGTQAKNSA--------RADARHTNTL 140

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           S    + + +S+ L   G  SV +        ++   +  LF+  
Sbjct: 141 SFAE-LQNVISQLLAPQGTASVILPLQSLASFIQQLNAYGLFVAK 184


>gi|15923477|ref|NP_371011.1| hypothetical protein SAV0487 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926164|ref|NP_373697.1| hypothetical protein SA0445 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266945|ref|YP_001245888.1| hypothetical protein SaurJH9_0508 [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392991|ref|YP_001315666.1| hypothetical protein SaurJH1_0521 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978815|ref|YP_001441074.1| hypothetical protein SAHV_0484 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316236|ref|ZP_04839449.1| hypothetical protein SauraC_08871 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005280|ref|ZP_05143881.2| hypothetical protein SauraM_02395 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257794272|ref|ZP_05643251.1| methyltransferase [Staphylococcus aureus A9781]
 gi|258407211|ref|ZP_05680356.1| methyltransferase [Staphylococcus aureus A9763]
 gi|258420823|ref|ZP_05683759.1| methyltransferase [Staphylococcus aureus A9719]
 gi|258429603|ref|ZP_05688277.1| methyltransferase small [Staphylococcus aureus A9299]
 gi|258446126|ref|ZP_05694287.1| methyltransferase [Staphylococcus aureus A6300]
 gi|258448034|ref|ZP_05696164.1| methyltransferase small [Staphylococcus aureus A6224]
 gi|258453819|ref|ZP_05701792.1| methyltransferase small [Staphylococcus aureus A5937]
 gi|269202106|ref|YP_003281375.1| hypothetical protein SAAV_0433 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895093|ref|ZP_06303313.1| hypothetical protein SGAG_02433 [Staphylococcus aureus A8117]
 gi|295407376|ref|ZP_06817173.1| hypothetical protein SMAG_02548 [Staphylococcus aureus A8819]
 gi|296276558|ref|ZP_06859065.1| hypothetical protein SauraMR_09414 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246456|ref|ZP_06930296.1| hypothetical protein SLAG_02531 [Staphylococcus aureus A8796]
 gi|13700377|dbj|BAB41675.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246255|dbj|BAB56649.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740014|gb|ABQ48312.1| methyltransferase small [Staphylococcus aureus subsp. aureus JH9]
 gi|149945443|gb|ABR51379.1| methyltransferase small [Staphylococcus aureus subsp. aureus JH1]
 gi|156720950|dbj|BAF77367.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257788244|gb|EEV26584.1| methyltransferase [Staphylococcus aureus A9781]
 gi|257841169|gb|EEV65618.1| methyltransferase [Staphylococcus aureus A9763]
 gi|257843215|gb|EEV67628.1| methyltransferase [Staphylococcus aureus A9719]
 gi|257849662|gb|EEV73629.1| methyltransferase small [Staphylococcus aureus A9299]
 gi|257855103|gb|EEV78045.1| methyltransferase [Staphylococcus aureus A6300]
 gi|257858724|gb|EEV81597.1| methyltransferase small [Staphylococcus aureus A6224]
 gi|257863990|gb|EEV86745.1| methyltransferase small [Staphylococcus aureus A5937]
 gi|262074396|gb|ACY10369.1| hypothetical protein SAAV_0433 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762511|gb|EFC02651.1| hypothetical protein SGAG_02433 [Staphylococcus aureus A8117]
 gi|285816186|gb|ADC36673.1| Predicted O-methyltransferase [Staphylococcus aureus 04-02981]
 gi|294967733|gb|EFG43765.1| hypothetical protein SMAG_02548 [Staphylococcus aureus A8819]
 gi|297176643|gb|EFH35905.1| hypothetical protein SLAG_02531 [Staphylococcus aureus A8796]
 gi|312828982|emb|CBX33824.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315128613|gb|EFT84616.1| hypothetical protein CGSSa03_01530 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329725057|gb|EGG61552.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|291524150|emb|CBK89737.1| Predicted O-methyltransferase [Eubacterium rectale DSM 17629]
          Length = 252

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             RL      F    +  LL D A        + +   R +DL TG G + + L  ++  
Sbjct: 18  GYRLIQDPKLFCFGIDAVLLSDYA--------KVKRGERAVDLCTGNGVIPILLEAKNNG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI-- 175
               G+++  +  ++A+ +   N + ++    + D  ++ E       +V+  NPPY+  
Sbjct: 70  EHYSGLELQPQCADLARRSVKYNHLEDKVTIEEGDVCNASELFGRESVEVVTVNPPYMIG 129

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +      + +   + R +LD           I    ++ L  +G   +  
Sbjct: 130 QHGIKNADDAMTIARHEVRCTLD----------DIVRESAKMLKFNGRFYMVH 172


>gi|282910125|ref|ZP_06317931.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282325973|gb|EFB56279.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312436425|gb|ADQ75496.1| methyltransferase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  NFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|255023245|ref|ZP_05295231.1| methyltransferase small domain protein [Listeria monocytogenes FSL
           J1-208]
          Length = 250

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 10  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++AK + + N + E+ + ++ D  +  +      
Sbjct: 59  GIIPL-LLSTRTKAKIVGVEIQERLADMAKRSILYNHLEEQIEMMEYDLKNITDLIPKER 117

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 118 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 167

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++      +L
Sbjct: 168 GKANFVHRPERLLDIIDTMRKYRL 191


>gi|49482714|ref|YP_039938.1| hypothetical protein SAR0488 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424598|ref|ZP_05601026.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427264|ref|ZP_05603665.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429900|ref|ZP_05606286.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432603|ref|ZP_05608965.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435508|ref|ZP_05611558.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904862|ref|ZP_06312722.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907809|ref|ZP_06315647.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282913313|ref|ZP_06321104.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282918267|ref|ZP_06326007.1| hypothetical protein SASG_02733 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282923018|ref|ZP_06330704.1| hypothetical protein SARG_02572 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283957275|ref|ZP_06374733.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500363|ref|ZP_06666215.1| hypothetical protein SCAG_02538 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293509301|ref|ZP_06668017.1| methyltransferase small [Staphylococcus aureus subsp. aureus M809]
 gi|293515889|ref|ZP_06670579.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|295427021|ref|ZP_06819658.1| hypothetical protein SIAG_02708 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297591604|ref|ZP_06950241.1| methyltransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|49240843|emb|CAG39510.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257272625|gb|EEV04745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275915|gb|EEV07383.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279416|gb|EEV10011.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282468|gb|EEV12601.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285145|gb|EEV15262.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314537|gb|EFB44924.1| hypothetical protein SARG_02572 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317833|gb|EFB48202.1| hypothetical protein SASG_02733 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282322784|gb|EFB53104.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           M899]
 gi|282328285|gb|EFB58560.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331979|gb|EFB61488.1| methyltransferase small [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|283791199|gb|EFC30009.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921297|gb|EFD98355.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           M1015]
 gi|291096323|gb|EFE26583.1| hypothetical protein SCAG_02538 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291467846|gb|EFF10356.1| methyltransferase small [Staphylococcus aureus subsp. aureus M809]
 gi|295129024|gb|EFG58653.1| hypothetical protein SIAG_02708 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575473|gb|EFH94190.1| methyltransferase [Staphylococcus aureus subsp. aureus MN8]
 gi|315193848|gb|EFU24242.1| hypothetical protein CGSSa00_12472 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  NFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|54307732|ref|YP_128752.1| hypothetical protein PBPRA0527 [Photobacterium profundum SS9]
 gi|81828856|sp|Q6LUS5|RSMC_PHOPR RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|46912155|emb|CAG18950.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium profundum
           SS9]
          Length = 339

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 62/169 (36%), Gaps = 37/169 (21%)

Query: 62  NVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            V LT+      F   E    ++LL+      +LP +      ++LD G G G +   + 
Sbjct: 168 GVELTVRSLPGVFSHGEFDNGSKLLI-----NTLPSLRG----KVLDFGCGAGVLGAIMK 218

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + P  +    DIS  A+E AK     N +  +F    +D +S ++G ++ ++SNPP+  
Sbjct: 219 AKHPRIELELCDISALAIESAKETFKVNQLDAKFTA--TDVYSELKGPYNYLISNPPFHA 276

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +       E                             +L  DG   +
Sbjct: 277 GLKTFYTATE---------------------NFIAQAPNYLFSDGQLII 304


>gi|51891645|ref|YP_074336.1| ribosomal protein L11 methyltransferase [Symbiobacterium
           thermophilum IAM 14863]
 gi|60390360|sp|Q67S51|PRMA_SYMTH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|51855334|dbj|BAD39492.1| ribosomal protein L11 methyltransferase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 304

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL             R++D+GTG+G + +A  K     + V +D+   A++ A+ NA  
Sbjct: 156 TALCMRWLEELVTPGSRVIDVGTGSGILAVA-AKHLGAAEVVAIDVDPVAVDAARENAGR 214

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           NGV    D   +      EG  D+IV+N   I SVIVD L 
Sbjct: 215 NGVE--IDVRLATLDQVAEGEADLIVAN--IIASVIVDILP 251


>gi|222823924|ref|YP_002575498.1| methylase [Campylobacter lari RM2100]
 gi|222539146|gb|ACM64247.1| conserved hypothetical protein, possible methylase [Campylobacter
           lari RM2100]
          Length = 230

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD+G G G + L + ++ P  K   +DI  + ++++  NA  N +  +    +      
Sbjct: 33  ILDIGCGCGILGLLIKQKFPNSKVYLLDIQEQNIKLSYKNAKENKLEIQ-GICEDFLNYK 91

Query: 161 VEGLFDVIVSNPPYIESV 178
            +  FD ++SNPP+ +  
Sbjct: 92  SDIKFDFLISNPPFYKKN 109


>gi|228898788|ref|ZP_04063071.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL
           4222]
 gi|228860813|gb|EEN05190.1| hypothetical protein bthur0014_230 [Bacillus thuringiensis IBL
           4222]
          Length = 246

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGVRSVQYNGLKERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAF 250
           +    K+      
Sbjct: 182 LMRKYKIEPKRVR 194


>gi|227431611|ref|ZP_03913647.1| 50S ribosomal protein L11P methyltransferase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227352603|gb|EEJ42793.1| 50S ribosomal protein L11P methyltransferase [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 296

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 41/167 (24%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + +L   +       ET  L+  AL   +     R    ++D+GTG+G + +A  K+  
Sbjct: 128 MDPKLAFGTGV----HETTRLMIQALETVV-----RGGESMIDVGTGSGVLSVA-AKQLG 177

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESV 178
               +  DI    + +AK N   N V+     + SD     +++   D+IV+N       
Sbjct: 178 VAGILATDIDEMTVNVAKENLALNPVANDVTVVTSDLLESIAIDESVDLIVAN------- 230

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          ++             +       L   G   V
Sbjct: 231 --------------ILA--------DVIERLIPQTWSRLKPGGYFLV 255


>gi|78776927|ref|YP_393242.1| methyltransferase small [Sulfurimonas denitrificans DSM 1251]
 gi|78497467|gb|ABB44007.1| Methyltransferase small [Sulfurimonas denitrificans DSM 1251]
          Length = 231

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 11/165 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+G G G V L + K++   +   V+     ++ A  NA  N +  +    +S
Sbjct: 27  KPKGRVLDVGAGCGVVGLLVAKDNEKVELEAVEKQELFVKYATINARVNKIPYKIH--KS 84

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D+     E  +D I+SNPP+            V   +  +  +   +           V+
Sbjct: 85  DFLELDEESKYDYIISNPPFYHDG--------VTKSENEMLFNARYNSNLPLEQFFKKVT 136

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
           + L  +         +Q   +       K+  V+    +   DRV
Sbjct: 137 KILKPNSHFIFCYDASQFGLICEELSKVKMRAVDVQFIHSKIDRV 181


>gi|168181643|ref|ZP_02616307.1| ribosomal protein L11 methyltransferase [Clostridium botulinum Bf]
 gi|237796410|ref|YP_002863962.1| ribosomal protein L11 methyltransferase [Clostridium botulinum Ba4
           str. 657]
 gi|259534499|sp|C3L3G5|PRMA_CLOB6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|182675116|gb|EDT87077.1| ribosomal protein L11 methyltransferase [Clostridium botulinum Bf]
 gi|229261819|gb|ACQ52852.1| ribosomal protein L11 methyltransferase [Clostridium botulinum Ba4
           str. 657]
          Length = 312

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 18/137 (13%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIA---- 210
           +    VEG  +++V+N   I + ++  L   V+ F +         DG      I     
Sbjct: 233 NLMEVVEGRANIVVAN---IIADVIIFLTEGVKAFIE--------KDGYFIASGIINSRK 281

Query: 211 DGVSRHLNKDGLCSVEI 227
           + V + L + G    E+
Sbjct: 282 EDVIKKLEETGFVIEEV 298


>gi|228937337|ref|ZP_04099984.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228963133|ref|ZP_04124303.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228970223|ref|ZP_04130883.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976793|ref|ZP_04137206.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407]
 gi|228782889|gb|EEM31054.1| hypothetical protein bthur0002_220 [Bacillus thuringiensis Bt407]
 gi|228789458|gb|EEM37377.1| hypothetical protein bthur0003_220 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228796518|gb|EEM43956.1| hypothetical protein bthur0004_250 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228822295|gb|EEM68276.1| hypothetical protein bthur0008_230 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326937826|gb|AEA13722.1| methyltransferase [Bacillus thuringiensis serovar chinensis CT-43]
          Length = 246

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAF 250
           +    K+      
Sbjct: 182 LMRKYKIEPKRVR 194


>gi|229053882|ref|ZP_04195317.1| hypothetical protein bcere0026_230 [Bacillus cereus AH603]
 gi|228721423|gb|EEL72943.1| hypothetical protein bcere0026_230 [Bacillus cereus AH603]
          Length = 246

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   + L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVIPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGIRSVQYNNLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|126462971|ref|YP_001044085.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104635|gb|ABN77313.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 291

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  
Sbjct: 149 PAKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLDGRVACLEAAG 208

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F   +      FD++ +N   I    +  L   +              GL+         
Sbjct: 209 FDHPDIAAAAPFDLVFAN---ILKGPLIELAPAMAAH------VAPGGGLAIL------- 252

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   +   + ++   L    +D G
Sbjct: 253 ------SGLLVV-----QADSITEAYLAQGFELAQ-REDLG 281


>gi|209694514|ref|YP_002262442.1| putative methyltransferase [Aliivibrio salmonicida LFI1238]
 gi|229470497|sp|B6EIC1|RLMG_ALISL RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|208008465|emb|CAQ78632.1| putative methyltransferase [Aliivibrio salmonicida LFI1238]
          Length = 382

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 37/184 (20%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  I     +R I+DLG G G + +   + +P  +   +D S  A+E A+ N 
Sbjct: 216 DQGARFMLEHIPVDAELRHIIDLGCGNGVLSVKAAQLNPEARITCIDESFMAVESARRNL 275

Query: 142 VTN-GVSERFDTLQSDWFSSVEGLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N G   +F  + ++     +     +V  NPP+ +       G  V D          
Sbjct: 276 EVNLGKERQFQFIANNCLDGFKKHSSYLVLCNPPFHQ-------GQAVTDH--------- 319

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ------------KVDVVRIFESRKLFLV 247
                    +       L K+G   V IG               + +V  I  + K  ++
Sbjct: 320 -----IAWQMFCDAKHILCKEGKLLV-IGNRHLDYDDKLCRLFGEENVTTIASNSKFVIL 373

Query: 248 NAFK 251
            A K
Sbjct: 374 EAVK 377


>gi|229917426|ref|YP_002886072.1| methyltransferase small [Exiguobacterium sp. AT1b]
 gi|229468855|gb|ACQ70627.1| methyltransferase small [Exiguobacterium sp. AT1b]
          Length = 245

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 26/187 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           ++  S D F    +  LL +                +++DL  GTGA+ L L   +    
Sbjct: 19  KIIQSDDVFSFSLDAVLLAEFVWVPI-------QKGQLVDLCAGTGAIPLFLSYRTKG-T 70

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVI 179
             GV+I  K +++A  +   N + ER   ++ D  ++        +DVI  NPPY  +  
Sbjct: 71  ITGVEIQSKLVDMANRSMAVNHLEERIRVVKGDVKTAAAQLGHARYDVITCNPPYFLANE 130

Query: 180 VDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                      +   +   +L                 S+ +   G  +      + +D+
Sbjct: 131 TSLRNQNEHHTIARHEVLCTL----------EDCIKTASQLVKPGGKVAFVHRPERLLDI 180

Query: 236 VRIFESR 242
           + +  + 
Sbjct: 181 LTLMRAY 187


>gi|71064628|ref|YP_263355.1| hypothetical protein Psyc_0047 [Psychrobacter arcticus 273-4]
 gi|71037613|gb|AAZ17921.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 202

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTF-EPRPETELL-------VDSALAFSLPRIEKRD 97
           + H     +L    ++   +    D   +P              +D      L  ++ ++
Sbjct: 1   MSHRPPSDLLEKAKYWREDINFRQDVLGKPFDFATTWGIFSPQKLDDGSLMLLDYVDFQN 60

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
               +DLG G G + +A  +E P  +   +D    A+E A+ N   NG+    D   S+ 
Sbjct: 61  DDDSIDLGCGYGVLGMAAARECPNGQHTLIDKDFMAVEYARLNCEKNGL-NNVDVHLSNG 119

Query: 158 FSSVEGLFDV--IVSNPPYIESVIVDCL 183
           F+ V+   D   ++SN P         L
Sbjct: 120 FNHVDKAKDFSLVMSNLPAKVGKEQHYL 147


>gi|14521889|ref|NP_127366.1| hypothetical protein PAB1237 [Pyrococcus abyssi GE5]
 gi|5459109|emb|CAB50595.1| Hypothetical protein, Met-10+ like protein [Pyrococcus abyssi GE5]
          Length = 396

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 22/187 (11%)

Query: 16  GLSSHQVIVDPD-SVLDDRQRFFLTNAIVRSLKHESIHRI----LGWRDFYNV------R 64
           G+   ++ V      ++            RS + E +  I    LG   +  +      +
Sbjct: 129 GMERFKLDVAEAIMEVEPEIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIEEGKAK 188

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +         +T   +D                R+LD+ T TG   +         + 
Sbjct: 189 FIVDMR----GQKTGFFLDQRENRLALEKWINPGDRVLDVFTYTGGFAIHAAIAGAD-EV 243

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESV 178
           + +D S +A+E AK NA  NGV ++   +    F  +E        FDV++ +PP     
Sbjct: 244 IAIDKSPRAIETAKENAKLNGVEDKIKFIVGSAFEEMEKLQKKGEKFDVVILDPPAFVQH 303

Query: 179 IVDCLGL 185
             D    
Sbjct: 304 EKDLKPG 310


>gi|114327554|ref|YP_744711.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
 gi|114315728|gb|ABI61788.1| methyltransferase [Granulibacter bethesdensis CGDNIH1]
          Length = 250

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I  R   R+L+ GTG GA  L L    P  +G GV+ S     +A+ N  TN +  R   
Sbjct: 39  IPARAEERVLEAGTGPGAGLLCLAHRVPGIQGTGVEKSSDIATLARQNVQTNHLENRLSI 98

Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESV 178
           +  D     + +      +D + +NPP+ E  
Sbjct: 99  ITQDILDFAQEMSGSPSNYDHVFANPPWHEEA 130


>gi|307638161|gb|ADN80611.1| Predicted O-methyltransferase [Helicobacter pylori 908]
 gi|325996760|gb|ADZ52165.1| Predicted O-methyltransferase [Helicobacter pylori 2018]
 gi|325998355|gb|ADZ50563.1| hypothetical protein hp2017_1439 [Helicobacter pylori 2017]
          Length = 238

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNGGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++A  V + L   G    
Sbjct: 118 QIKGHARHQSEL----------DFASLAAKVKKCLKPKGYFIF 150


>gi|262189974|ref|ZP_06048282.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae CT
           5369-93]
 gi|262034145|gb|EEY52577.1| ribosomal RNA small subunit methyltransferase C [Vibrio cholerae CT
           5369-93]
          Length = 376

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 68/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 198 YAITLTNLPNVY-----SGESLDLGARFILENLPADPTLEDFIDLGCGNGVLSVRLGQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 253 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPPFHQQQ 312

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 313 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 349

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 350 LARLF---GKSHVRVI---ANNSKFVILQ 372


>gi|229051299|ref|ZP_04194817.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH676]
 gi|229111785|ref|ZP_04241332.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock1-15]
 gi|229148159|ref|ZP_04276465.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-ST24]
 gi|228635299|gb|EEK91823.1| Ribosomal protein L11 methyltransferase [Bacillus cereus BDRD-ST24]
 gi|228671659|gb|EEL26956.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock1-15]
 gi|228722057|gb|EEL73484.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH676]
          Length = 312

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDAIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNTTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|261838778|gb|ACX98544.1| hypothetical protein KHP_1356 [Helicobacter pylori 51]
          Length = 238

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+DVIV NPP Y    I  
Sbjct: 60  SVHLVEKDSKMAFCSQKNAIKFPNAQVFESDFLDFNPPI--LYDVIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++A  V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|330445288|ref|ZP_08308940.1| 23S rRNA m2G1835 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489479|dbj|GAA03437.1| 23S rRNA m2G1835 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 374

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 57/156 (36%), Gaps = 27/156 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDT 152
           + +    I+DLG G G + +   + +P  K   VD S  A    + NA  N    E+   
Sbjct: 227 QDKKYQDIIDLGCGNGVIGIKAAQLNPQAKVTCVDESFMAAASCRENANINLENPEQLTV 286

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + ++   + E    D+++ NPP+ +          V D                   +  
Sbjct: 287 VNANCLDNFEPDSADLVLCNPPFHQ-------QNTVTDH--------------IAWQMFC 325

Query: 212 GVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
              R L K G   V IG  Q      + R+F + KL
Sbjct: 326 DAQRTLRKGGEMIV-IGNRQLGYHEKLKRVFSNVKL 360


>gi|322417812|ref|YP_004197035.1| 50S ribosomal protein L11 methyltransferase [Geobacter sp. M18]
 gi|320124199|gb|ADW11759.1| ribosomal protein L11 methyltransferase [Geobacter sp. M18]
          Length = 306

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T++ ++S    +      +    +LD+GTG+G + +A        +   VDI  +A+ 
Sbjct: 150 PTTKMCLESLERIAFDACGCKLPDPVLDVGTGSGVLSIAAAL-LGATEITAVDIDPEAVR 208

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           + + N   NGV++R     +D     EG F V+V+N
Sbjct: 209 VTQENLELNGVADRVTASTTDLSRLPEG-FAVVVAN 243


>gi|229031961|ref|ZP_04187947.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH1271]
 gi|228729351|gb|EEL80342.1| Ribosomal protein L11 methyltransferase [Bacillus cereus AH1271]
          Length = 312

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPASPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTIIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +K+ +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKI-ISEALEKAGFTIEEVLR 300


>gi|119383374|ref|YP_914430.1| ribosomal L11 methyltransferase [Paracoccus denitrificans PD1222]
 gi|119373141|gb|ABL68734.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Paracoccus
           denitrificans PD1222]
          Length = 289

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 78/202 (38%), Gaps = 51/202 (25%)

Query: 73  EPRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    E  +  RI+D+G GT  + +A  +
Sbjct: 109 VPAGAEALLIEAAMAFGTGHHATTKGCLLALDRLIAEGVEPRRIVDIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPP 173
             P    +  DI  +A+++A++N + NG+  R + +++  F          FD++ +N  
Sbjct: 169 SFP-VIVLAGDIDPQAVDVARANVIANGLDGRVECVEAVGFDHPLIENAAPFDLVFAN-- 225

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQK 232
            ++  ++D +        P ++                   RHL   G   +  I   Q 
Sbjct: 226 ILKQPLIDLV--------PDMA-------------------RHLASGGRAILSGILATQA 258

Query: 233 VDVVRIFESRKLFLVNAFKDYG 254
            +V+  + +  L L     D G
Sbjct: 259 EEVIAAYAAGGLTL-ERRDDMG 279


>gi|228902837|ref|ZP_04066981.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis IBL
           4222]
 gi|228856793|gb|EEN01309.1| Ribosomal protein L11 methyltransferase [Bacillus thuringiensis IBL
           4222]
          Length = 312

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  I+D+GTG+G + +A   +         D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDAIIDVGTGSGVLSIA-ASKLGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEQAGFTIEEVLR 300


>gi|269966212|ref|ZP_06180301.1| Ribosomal RNA large subunit methyltransferase G [Vibrio
           alginolyticus 40B]
 gi|269829127|gb|EEZ83372.1| Ribosomal RNA large subunit methyltransferase G [Vibrio
           alginolyticus 40B]
          Length = 384

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L    + +     +   +D    F L  + +   +  ++DLG G G + +   + +P
Sbjct: 199 DIELKNMPNVY-----SGESLDLGARFMLQHLPQDPSIDNVIDLGCGNGVLSVKFGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             +   VD S  ALE AK N   N    R    + ++     +     +++ NPP+ +  
Sbjct: 254 NARLTCVDESFMALESAKQNLRDNLGENRDIQCIANNCLDGFKHSSSSMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L+++G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQVLSENGRLLVIGNRHLGYD--AK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + L+
Sbjct: 351 LKRLFGDKNVKLI 363


>gi|229174987|ref|ZP_04302506.1| Ribosomal protein L11 methyltransferase [Bacillus cereus MM3]
 gi|228608448|gb|EEK65751.1| Ribosomal protein L11 methyltransferase [Bacillus cereus MM3]
          Length = 312

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPASPEEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQPGDTVIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +K+ +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKI-ISEALEKAGFTIEEVLR 300


>gi|91223429|ref|ZP_01258694.1| putative methyltransferase [Vibrio alginolyticus 12G01]
 gi|91191515|gb|EAS77779.1| putative methyltransferase [Vibrio alginolyticus 12G01]
          Length = 384

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 35/193 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESP 120
           ++ L    + +     +   +D    F L  + +   +  ++DLG G G + +   + +P
Sbjct: 199 DIELKNMPNVY-----SGESLDLGARFMLQHLPQDPSIDNVIDLGCGNGVLSVKFGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEG-LFDVIVSNPPYIESV 178
             +   VD S  ALE AK N   N    R    + ++     +     +++ NPP+ +  
Sbjct: 254 NARLTCVDESFMALESAKQNLRDNLGENRDIQCIANNCLDGFKHSSSSMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L+++G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQVLSENGRLLVIGNRHLGYD--AK 350

Query: 235 VVRIFESRKLFLV 247
           + R+F  + + L+
Sbjct: 351 LKRLFGDKNVKLI 363


>gi|254515657|ref|ZP_05127717.1| ribosomal ribonucleate guanine-2-methyltransferase [gamma
           proteobacterium NOR5-3]
 gi|219675379|gb|EED31745.1| ribosomal ribonucleate guanine-2-methyltransferase [gamma
           proteobacterium NOR5-3]
          Length = 380

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 45/144 (31%), Gaps = 27/144 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFS 159
           I+DLG G G V L    + P      VD S  A+  A+ N     G         SD   
Sbjct: 240 IIDLGCGNGVVGLHTAAQHPAAMVHFVDESFMAVASARENFDRVFGPERAAAFCVSDGLD 299

Query: 160 SVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
             E    D+++ NPP+ +   V                     G    + +       L 
Sbjct: 300 GFEAASADLVLCNPPFHQQQAV---------------------GDQIAQRMFRQAREVLR 338

Query: 219 KDGLCSVEIGYNQ---KVDVVRIF 239
             G   V IG         + R+F
Sbjct: 339 PGGELWV-IGNRHLGYHAALKRLF 361


>gi|320144205|gb|EFW35973.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus MRSA177]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +  + D F    +  LL            + R    +LDL +G G + L L  + P    
Sbjct: 18  IIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR-HI 68

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIV 180
            GV+I    +++A+     N V E       D  +         + ++  NPPY +    
Sbjct: 69  EGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKENQQ 128

Query: 181 DCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                E       +   +L    D +   R +       L + G  ++     +   ++ 
Sbjct: 129 HQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVH---RAERLMD 175

Query: 238 IFESRKLFLVNAFK 251
           +    +   +   K
Sbjct: 176 VLFEMRKVNIEPKK 189


>gi|15678174|ref|NP_275289.1| precorrin-8W decarboxylase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|48427901|sp|O26249|CBIT_METTH RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|2621187|gb|AAB84652.1| precorrin-8W decarboxylase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 192

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 57/182 (31%), Gaps = 43/182 (23%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P    +    L   L    K DV   +D+G GTG V L L       +   +D + +
Sbjct: 13  VPGPTAMEV--RCLIMCLAEPGKNDVA--VDVGCGTGGVTLELAGRVR--RVYAIDRNPE 66

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+   + N   +G+ +    ++ D   ++  + D+                         
Sbjct: 67  AISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDI------------------------- 101

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            I++ GG  G    + I   +   L   G             V  I    K   +   +D
Sbjct: 102 DIAVVGGSGG--ELQEILRIIKDKLKPGGRII----------VTAILLETKFEAMECLRD 149

Query: 253 YG 254
            G
Sbjct: 150 LG 151


>gi|315660346|ref|ZP_07913199.1| methyltransferase [Staphylococcus lugdunensis M23590]
 gi|315494635|gb|EFU82977.1| methyltransferase [Staphylococcus lugdunensis M23590]
          Length = 241

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++  + D F    +  LL            E R    I+DL +G G + L LL     
Sbjct: 15  NLKVIQNDDVFSFSTDALLL--------GYFTEVRKKDTIMDLCSGNGVIPL-LLSAKGT 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            +   ++I  + +++A+ +   N +  R      D   + +      + ++  NPPY + 
Sbjct: 66  QQIDAMEIQIQLVDMARRSFKYNHLENRLTLFHMDLKETTQYFKPSQYSLVTCNPPYFKI 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D               L + G   +     +   
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---SD-------CMKAAQHLLKQGGRLMMVH---RAER 172

Query: 235 VVRIFESRKLFLVN 248
           ++ +    +   + 
Sbjct: 173 LMDVLTEMRQVNIE 186


>gi|313635230|gb|EFS01532.1| methyltransferase small domain-containing protein [Listeria
           seeligeri FSL N1-067]
          Length = 257

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK + V N +  + + ++ D     +      
Sbjct: 66  GIIPL-LLSTRTEAQIVGVEIQPRLADMAKRSVVYNELESQIEIIEHDLKKITDIIPKER 124

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY    +  +       R    +   +L                 S  L + 
Sbjct: 125 ADIVTCNPPYFAGPATSLKNENEHYRIARHEVMCTL----------EDTIRVASNLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 175 GKANFVHRPERLLDILDLMRKYRL 198


>gi|262377500|ref|ZP_06070722.1| 16S RNA methylase RsmC [Acinetobacter lwoffii SH145]
 gi|262307556|gb|EEY88697.1| 16S RNA methylase RsmC [Acinetobacter lwoffii SH145]
          Length = 344

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    +I D G G G +   L K +P  +   +D+   AL   +    
Sbjct: 180 DVGTATLLPYLSQVTSGKIADFGCGAGVISAYLAKLNPKNRIFAMDVDAFALASTQMTFE 239

Query: 143 TNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N +  E+ +                IVSNPP+   +  D    E               
Sbjct: 240 ENQLIPEQIEIKAVKGIEDAPLFLHAIVSNPPFHMGIETDYTASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                 T+     RHL   G   +
Sbjct: 285 ------TLCKISRRHLKSGGELWI 302


>gi|114564263|ref|YP_751777.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella frigidimarina
           NCIMB 400]
 gi|122298914|sp|Q07YH6|RLMG_SHEFN RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|114335556|gb|ABI72938.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella frigidimarina
           NCIMB 400]
          Length = 392

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 50/159 (31%), Gaps = 39/159 (24%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K +   I+DLG G G + L   +  P  +   VD S  A+  AK N  
Sbjct: 218 DIGARIMLDNMPKGEFKHIIDLGCGNGILGLHAKQCYPNAQIHFVDDSDMAIASAKHNWQ 277

Query: 143 TNGVS----------------ERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLG 184
            N +                  +      D  S++      D+++ NPP+ +   +    
Sbjct: 278 ANELDTPSQDLQSQDPQTEQMPQAFFHWDDCLSNLPADVEPDLVICNPPFHQGEAITD-- 335

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                    I+             +     + L K GL 
Sbjct: 336 --------HIAW-----------QMFVDAHKRLKKGGLL 355


>gi|221639995|ref|YP_002526257.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides KD131]
 gi|221160776|gb|ACM01756.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides KD131]
          Length = 291

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A  +  P  + +  DI   A+E+A++N   NG+  R   L++  
Sbjct: 149 PRKVADVGCGTAVLAMAAARVFPEAQVLASDIDEVAVEVAEANVAINGLEGRVACLEAAG 208

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F   E      FD++ +N   I    +  L   +              GL+         
Sbjct: 209 FDHPEIAAAAPFDLVFAN---ILKGPLIELAPAMAAH------VAPGGGLAIL------- 252

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   +   + ++   L    +D G
Sbjct: 253 ------SGLLVV-----QADSITEAYLAQGFELAQ-REDLG 281


>gi|307595611|ref|YP_003901928.1| methyltransferase [Vulcanisaeta distributa DSM 14429]
 gi|307550812|gb|ADN50877.1| methyltransferase small [Vulcanisaeta distributa DSM 14429]
          Length = 214

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 98  VVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
             R+LDLG GTG  A+  AL+      + + VDI  +AL IAK +A   G+    D + +
Sbjct: 57  NARVLDLGCGTGRFAIAAALMGAR---QVICVDIDPEALTIAKESASEYGL-NNVDFVTN 112

Query: 156 DWFS-SVEGLFDVIVSNPPY 174
           D  + ++ G F+VI  NPP+
Sbjct: 113 DVRNMAITGKFNVIFQNPPF 132


>gi|238750394|ref|ZP_04611895.1| Methyltransferase small [Yersinia rohdei ATCC 43380]
 gi|238711325|gb|EEQ03542.1| Methyltransferase small [Yersinia rohdei ATCC 43380]
          Length = 251

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 17/178 (9%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + + +       GV++  +A   A SNA  +  +ER 
Sbjct: 45  WVPVEKARKVLDIGCGSGLIALMIAQRTATEVVIDGVELEPEAAAQACSNAAQSPWAERV 104

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              + D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 105 HIYEQDVHLFAENHSHQYDLIVSNPPYFAPAVACR--DEARD-------TARYTGSLTHD 155

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESRKLFLVNA-FKDYGGND--RVLL 261
            + +   + +  +G+  V + ++  V+  R+  E R         +D  G    R+LL
Sbjct: 156 ALLNSAEKLITAEGIFCVVLPHDLGVEFARLALEQRWFIHCQVDIRDRPGKPLHRMLL 213


>gi|228905831|ref|ZP_04069729.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200]
 gi|228853771|gb|EEM98530.1| hypothetical protein bthur0013_230 [Bacillus thuringiensis IBL 200]
          Length = 246

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAF 250
           +    K+      
Sbjct: 182 LMRKYKIEPKRVR 194


>gi|317178212|dbj|BAJ56001.1| hypothetical protein HPF16_1404 [Helicobacter pylori F16]
          Length = 238

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    +T+    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNTYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|229170886|ref|ZP_04298489.1| hypothetical protein bcere0006_240 [Bacillus cereus MM3]
 gi|228612552|gb|EEK69771.1| hypothetical protein bcere0006_240 [Bacillus cereus MM3]
          Length = 246

 Score = 67.4 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNVLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSIQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|296139549|ref|YP_003646792.1| methyltransferase small [Tsukamurella paurometabola DSM 20162]
 gi|296027683|gb|ADG78453.1| methyltransferase small [Tsukamurella paurometabola DSM 20162]
          Length = 494

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 59/154 (38%), Gaps = 16/154 (10%)

Query: 74  PRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P+    +L V  A    L    +     +LDLGTG G    A        + V  DIS +
Sbjct: 135 PQDREHVLGVGHASQSLLRATPREPAGSVLDLGTGCGV--HACGAARFADRVVATDISDR 192

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A   A ++A  NGV    D    DWF+ V G  FD++++NPP++                
Sbjct: 193 AAGFAAASAALNGVE--VDVRTGDWFAPVAGERFDLLLANPPFVVGEGRVD--------- 241

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                D G+D       +      HL   G  ++
Sbjct: 242 -HTYRDSGLDLDGATELVVRSAPAHLAPGGTAAL 274


>gi|229009545|ref|ZP_04166772.1| hypothetical protein bmyco0001_220 [Bacillus mycoides DSM 2048]
 gi|228751689|gb|EEM01488.1| hypothetical protein bmyco0001_220 [Bacillus mycoides DSM 2048]
          Length = 246

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   + L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVIPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   N + ER   +  D     E      +D++  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGIRSVQYNNLVERIHLIHGDLKDMPEKLGRHQYDIVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|229165024|ref|ZP_04292820.1| hypothetical protein bcere0007_220 [Bacillus cereus AH621]
 gi|228618409|gb|EEK75438.1| hypothetical protein bcere0007_220 [Bacillus cereus AH621]
          Length = 246

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   + L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVIPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   N ++ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGIRSVQYNNLAERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAF 250
           +    K+      
Sbjct: 182 LMRKYKIEPKRVR 194


>gi|159899618|ref|YP_001545865.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892657|gb|ABX05737.1| rRNA (guanine-N(2)-)-methyltransferase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 365

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D A A  L  +  +   R+LDLG G G + + L +         +D +  A+E  K N  
Sbjct: 208 DPASAMLLDAVHIQANQRVLDLGCGAGILGMFLQQRESTLALTYIDSTMVAIEATKRNLQ 267

Query: 143 TNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           TN ++ R   L SD   +V G  FD++VSNPP+    +            P+++      
Sbjct: 268 TNQLTGRV--LASDGIQAVNGEQFDLVVSNPPFHVGRVQS----------PQLA------ 309

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                  +     + L  +G   +
Sbjct: 310 -----ENLLKQAVQVLAPNGQLVI 328



 Score = 37.4 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 11/96 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
               LL +   +   P  +       L +G GTG + LAL +          D S  AL 
Sbjct: 19  WGATLLAEWGASVVTPGQQA------LVIGAGTGRIGLALARA--GAHVSFADDSIVALA 70

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            A+ +     +  +F    +D   S    FD+++ N
Sbjct: 71  AARQSFAQAKLPAQF-FSTTDLTPS--KPFDLVLIN 103


>gi|121601757|ref|YP_989216.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis
           KC583]
 gi|120613934|gb|ABM44535.1| ribosomal protein L11 methyltransferase [Bartonella bacilliformis
           KC583]
          Length = 291

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 69/172 (40%), Gaps = 37/172 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++  +    LDLGTG+G + +A+    P    +  DI   A+++A+ N   NG
Sbjct: 139 LEMITKVVQNENPQNALDLGTGSGVLAIAIAMLKPIP-VLASDIDPIAIQVAQHNIKLNG 197

Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           V +    + +  F+  +        FD+IV+N   + + +++                  
Sbjct: 198 VEKYVTAVTASGFNYDDKETVPCAPFDLIVAN--ILANPLIE------------------ 237

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                    +A+ + + L K+G   +  I   Q  +V++ +  + L  +  +
Sbjct: 238 ---------LAEEMVKALQKNGSIILSGILEEQHDNVLQAYVQQGLKHIETY 280


>gi|156407093|ref|XP_001641379.1| predicted protein [Nematostella vectensis]
 gi|156228517|gb|EDO49316.1| predicted protein [Nematostella vectensis]
          Length = 500

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 12/145 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  +   +L++G GTG   +     S   +    D++  A++    NA  +GV  +  T 
Sbjct: 69  KPGEAFALLEIGCGTGLTSIMAALYSKKCQVWATDVNPSAVKNTAENAKLHGVDNQVRTA 128

Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             D F +       FD+I  + P+I          +V   +  + +D G  GL   R   
Sbjct: 129 TGDVFKAPGLAGKTFDIIFWSHPFIPFKPDITPDRDVSFLEKGL-MDPGYRGL---RDFI 184

Query: 211 DGVSRHLNKDG-----LCSVEIGYN 230
            GV   +         + S EIG+ 
Sbjct: 185 LGVKAFMKSSRTRVFIVFSFEIGFT 209


>gi|89100453|ref|ZP_01173315.1| ribosomal protein L11 methyltransferase [Bacillus sp. NRRL B-14911]
 gi|89084796|gb|EAR63935.1| ribosomal protein L11 methyltransferase [Bacillus sp. NRRL B-14911]
          Length = 312

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 52/219 (23%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +YN      R T+      + P    EL+++     +         V        
Sbjct: 112 TAWKKYYNPVKISERFTIVPTWEDYTPVSSDELIIELDPGMAFGTGTHPTTVMCIQALER 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                 R++D+GTG+G + +A        K   +D+   A++ A+ N   N V E     
Sbjct: 172 TVAQGDRVVDVGTGSGVLSIAAAMLGAE-KVEALDLDEVAVKSARLNIKLNKVHETVSVS 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++  + V+   DV+V+N                      ++               D V
Sbjct: 231 QNNLLNGVQEGADVVVAN---------------------ILA--------EVILRFTDEV 261

Query: 214 SRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           ++ + K G   +  I   +K  V          +    +
Sbjct: 262 AKTVKKGGRFIASGIIQQKKQQVKEAIIQAGFEIEEILQ 300


>gi|261212266|ref|ZP_05926552.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341]
 gi|260838874|gb|EEX65525.1| 16S RNA G1207 methylase RsmC [Vibrio sp. RC341]
          Length = 340

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 29/165 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +      F        L    L  +LP +      +++D+G G G +   + K +P
Sbjct: 170 HELTIRSLPGVFSHGEFD--LGSRLLLDTLPALSG----KVIDIGCGAGVLGCVMAKLNP 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    DIS  A+  ++   + N +S R     SD  S+V   +  IV+NPP+   +  
Sbjct: 224 EIELEMTDISALAIRSSQETLIANQLSGRV--YPSDMLSNVGSQYHYIVTNPPFHSGLDT 281

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                E                      +      HL   G   V
Sbjct: 282 RYSPTE---------------------QLLAESIHHLAATGSLWV 305


>gi|283469779|emb|CAQ48990.1| methyltransferase [Staphylococcus aureus subsp. aureus ST398]
          Length = 241

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  DFSIIQNDDVFSFSTDALLL--------GYFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|195171542|ref|XP_002026564.1| GL21973 [Drosophila persimilis]
 gi|194111480|gb|EDW33523.1| GL21973 [Drosophila persimilis]
          Length = 296

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 50  SIHRILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILD 103
            +  ILG          ++  +S   F         +L   A+    P         +LD
Sbjct: 26  PVDHILGTTHITDTIQGLQFRISPLAFFQINTEGANVLYQQAIDLVAPT----KNTTMLD 81

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +  GTG + LA  K     + +GV+I   A++ A+ NA  NG+  
Sbjct: 82  ICCGTGTIALAFAKHCK--RVLGVEIVPDAIKDAQFNAEANGIKN 124


>gi|289621461|emb|CBI52244.1| unnamed protein product [Sordaria macrospora]
          Length = 247

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 67/183 (36%), Gaps = 36/183 (19%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA-VCLALLKES-----PFFK 123
             +EP  ++ LL+D+  + S              LG G+G  +       S     P   
Sbjct: 14  RVYEPAEDSFLLLDTLSSPSETAFLSS-------LGPGSGVVIAFLTAHASTIFGTPHVL 66

Query: 124 GVGVDISCKALEIA--------KSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPY 174
              +D+S  A              N  T+G       +Q D  + + G   DV+V NPPY
Sbjct: 67  TTAIDVSPFACAATDLTVRKAITENTSTSGHWT--SPIQGDLVTPLRGGSVDVLVFNPPY 124

Query: 175 IESVIVDCLG----LEVRD---FDPRISL-----DGGIDGLSHYRTIADGVSRHLNKDGL 222
           + +  +         E+R+   F+    L      GG DG+     + + + R L+  G+
Sbjct: 125 VPTPELPSPPAAPLQELREKTTFEEDSHLLELTYAGGKDGMETTDRLIEALPRVLSARGV 184

Query: 223 CSV 225
             +
Sbjct: 185 AYI 187


>gi|188995065|ref|YP_001929317.1| hypothetical protein PGN_1201 [Porphyromonas gingivalis ATCC 33277]
 gi|188594745|dbj|BAG33720.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 236

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A++            LD+GTGTG + L L +  P  +  G++I   A E A++NA  +  
Sbjct: 12  AWAGEDPAGSIPQHCLDIGTGTGLIALMLAQRFPQARVQGIEIDPIAAECARANAAASPF 71

Query: 147 SERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVI-VDCLGLEVRDFDPRISLDGG 199
           S+R      D   S          FD+IVSNPP+ +S +        +   +  + L   
Sbjct: 72  SDRIVIASGDILDSSLESLIGNQRFDLIVSNPPFFKSSLHAPDRQRTMARHEETLPL--- 128

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    +    S  L+  G  ++    ++  D+ 
Sbjct: 129 -------EKLICRASELLSPQGRLALITPRDRLKDLR 158


>gi|125622989|ref|YP_001031472.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|166223421|sp|A2RHI1|PRMA_LACLM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|124491797|emb|CAL96717.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300069730|gb|ADJ59130.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 317

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    DI   A+ +A  N   N   E+     +
Sbjct: 170 RGGETLLDVGTGSGVLSVA-ATYLGAAEIFAYDIDEVAVRVALENIELNPGHEKIHVSAN 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   DVIV+N                      ++             + D   R
Sbjct: 229 NLLEGIDKKADVIVAN---------------------ILA--------DILVLMTDDAFR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            + ++G   +  I  ++   V+   E+   FL
Sbjct: 260 LVKEEGYLIMSGIIADKADMVIASAENAGFFL 291


>gi|226713008|sp|A3M8J9|RSMC_ACIBT RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|193078279|gb|ABO13243.2| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           baumannii ATCC 17978]
          Length = 337

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 61/197 (30%), Gaps = 38/197 (19%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++  +D   A  LP + +    RI D G G G +   L K +       +DI   A
Sbjct: 171 PGVFSQTHLDVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFA 230

Query: 134 LEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+  +     NG+ S++         +      D IVSNPP+ + +  +    E      
Sbjct: 231 LQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE------ 284

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFL 246
                    GL           +HL   G   +         V        I   +    
Sbjct: 285 ---------GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQ 320

Query: 247 VNAFKDYGGNDRVLLFC 263
                D  G   VL  C
Sbjct: 321 CEIKTDLQGFK-VLYAC 336


>gi|289526956|pdb|3LPM|A Chain A, Crystal Structure Of Putative Methyltransferase Small
           Domain Protein From Listeria Monocytogenes
 gi|289526957|pdb|3LPM|B Chain B, Crystal Structure Of Putative Methyltransferase Small
           Domain Protein From Listeria Monocytogenes
          Length = 259

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 73/204 (35%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 12  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 60

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  + AK +   N + ++ + ++ D     +      
Sbjct: 61  GIIPL-LLSTRTKAKIVGVEIQERLADXAKRSVAYNQLEDQIEIIEYDLKKITDLIPKER 119

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVXCTL----------EDTIRVAASLLKQG 169

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ I    +L
Sbjct: 170 GKANFVHRPERLLDIIDIXRKYRL 193


>gi|282855513|ref|ZP_06264832.1| methyltransferase, UbiE/COQ5 family [Pyramidobacter piscolens
           W5455]
 gi|282586656|gb|EFB91905.1| methyltransferase, UbiE/COQ5 family [Pyramidobacter piscolens
           W5455]
          Length = 263

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 56/179 (31%), Gaps = 39/179 (21%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-------VDISCKALEIAKS 139
              L  +  +   R+LD+G G+GA+ +   +  P  + +G        D S K  E    
Sbjct: 82  DDLLDHLAWQGQGRLLDIGCGSGALSIRCARRFPGAQVIGVDYWSGVWDYSQKQCE---E 138

Query: 140 NAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           NA   G   R D    D       +  FD +VS   + E   +                 
Sbjct: 139 NARLEGCDGRIDFRHGDAARLEFADESFDAVVSCFVFHEVKTISGRSK------------ 186

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV--EIG----YNQKVDVVRIFESRKLFLVNAF 250
                    R + +   R L K G  +     G    Y    ++V+  +   L  V   
Sbjct: 187 ---------RPVVEEALRVLKKGGSFAFVDLFGRSALYGDMEELVQQMKDSGLREVGYV 236


>gi|169632498|ref|YP_001706234.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii SDF]
 gi|226712934|sp|B0VRJ4|RSMC_ACIBS RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169151290|emb|CAO99988.1| ribosomal RNA small subunit methyltransferase C (rRNA
           (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207
           methyltransferase) [Acinetobacter baumannii]
          Length = 337

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 61/197 (30%), Gaps = 38/197 (19%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++  +D   A  LP + +    RI D G G G +   L K +       +DI   A
Sbjct: 171 PGVFSQTHLDVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFA 230

Query: 134 LEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+  +     NG+ S++         +      D IVSNPP+ + +  +    E      
Sbjct: 231 LQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE------ 284

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFL 246
                    GL           +HL   G   +         V        I   +    
Sbjct: 285 ---------GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQ 320

Query: 247 VNAFKDYGGNDRVLLFC 263
                D  G   VL  C
Sbjct: 321 CEIKTDLQGFK-VLYAC 336


>gi|154148405|ref|YP_001406871.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
 gi|153804414|gb|ABS51421.1| methyltransferase small [Campylobacter hominis ATCC BAA-381]
          Length = 235

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +R+      +    +T  L D A      R +     +ILD+G G G + L L ++   F
Sbjct: 1   MRIFQFKSGYRYTSDTLFLWDFAAEILAKRYKGG---KILDVGAGCGILGLLLARDFKNF 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   ++I  +  +I + N   N +         + F +    FD IVSNPP+  +     
Sbjct: 58  KISLLEIQSENFQILRKNVTENELDCEILINDFNEFLT-SQKFDFIVSNPPFYNAKNTKT 116

Query: 183 L--GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                 +  FD  +SL          +      S +L ++G         +   +  IFE
Sbjct: 117 TNEHKLISKFDLNLSL----------KDFIKSSSLNLKQNGELIF---CYEAKVLSEIFE 163

Query: 241 SRK 243
           + K
Sbjct: 164 TLK 166


>gi|108563833|ref|YP_628149.1| hypothetical protein HPAG1_1408 [Helicobacter pylori HPAG1]
 gi|107837606|gb|ABF85475.1| hypothetical protein HPAG1_1408 [Helicobacter pylori HPAG1]
          Length = 238

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRSLIKNSGTILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F+    D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 QIKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|184159405|ref|YP_001847744.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU]
 gi|332876245|ref|ZP_08444020.1| methyltransferase small domain protein [Acinetobacter baumannii
           6014059]
 gi|226712933|sp|B2HYF8|RSMC_ACIBC RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|183210999|gb|ACC58397.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii ACICU]
 gi|322509317|gb|ADX04771.1| rsmC [Acinetobacter baumannii 1656-2]
 gi|323519344|gb|ADX93725.1| 16S RNA G1207 methylase RsmC [Acinetobacter baumannii TCDC-AB0715]
 gi|332735517|gb|EGJ66569.1| methyltransferase small domain protein [Acinetobacter baumannii
           6014059]
          Length = 337

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 61/197 (30%), Gaps = 38/197 (19%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++  +D   A  LP + +    RI D G G G +   L K +       +DI   A
Sbjct: 171 PGVFSQTHLDVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFA 230

Query: 134 LEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+  +     NG+ S++         +      D IVSNPP+ + +  +    E      
Sbjct: 231 LQSTEMTFSRNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE------ 284

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFL 246
                    GL           +HL   G   +         V        I   +    
Sbjct: 285 ---------GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQ 320

Query: 247 VNAFKDYGGNDRVLLFC 263
                D  G   VL  C
Sbjct: 321 CEIKTDLQGFK-VLYAC 336


>gi|24372681|ref|NP_716723.1| hypothetical protein SO_1097 [Shewanella oneidensis MR-1]
 gi|81845888|sp|Q8EHW5|RLMG_SHEON RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|24346733|gb|AAN54168.1|AE015554_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 377

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + +     ++DLG G G + L   +  P      +D S  A+  AK+N  
Sbjct: 218 DIGARIMLDNLPQGKFNTVVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWT 277

Query: 143 TNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N ++E    F           +   D+++ NPP+ +   +             I+    
Sbjct: 278 MNQLAEGKGHFHWDDCMTHLPEDIEPDLVLCNPPFHQGEAITD----------HIAW--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
                    +     R L   G+  + +G       V + R+F++ 
Sbjct: 325 --------QMFLDARRRLKNGGILHI-VGNRHLAYHVKLQRLFKNC 361


>gi|88858252|ref|ZP_01132894.1| Putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas tunicata D2]
 gi|88819869|gb|EAR29682.1| Putative ribosomal RNA small subunit methyltransferase D
           [Pseudoalteromonas tunicata D2]
          Length = 380

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 28/156 (17%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS--ERFDT 152
            +  + ++DLG G G + L  L+     K   +D S  A+  AK N   N     E+   
Sbjct: 232 GQKPLDVVDLGCGNGVIGLQTLQTLASAKLTFIDESFMAIASAKLNVEKNLAEKIEQCQF 291

Query: 153 LQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           +Q D  S +     D+I+ NPP+        L   V D                 R + +
Sbjct: 292 VQGDCLSDLATQSQDLILCNPPF------HQLQA-VTDH--------------IARQMFE 330

Query: 212 GVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
              R L   G   + +G         +  +F + +L
Sbjct: 331 DSHRVLRSGGELRI-VGNRHLDYHEQLKHLFGNCRL 365


>gi|328768130|gb|EGF78177.1| hypothetical protein BATDEDRAFT_91032 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 275

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 60/147 (40%), Gaps = 13/147 (8%)

Query: 59  DFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CL 113
            ++ +RL +  D+  P    R +  L ++  L+ S P ++    VR +D+GTG   +  L
Sbjct: 42  KYFGLRLEIPLDSLCPPVPNRLDYILHIEDLLSESNPSLDA--TVRGIDIGTGASCIYPL 99

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDV 167
                +P +  + ++I  ++++ A  N   N +      ++           +   ++D 
Sbjct: 100 LGCSRNPKWSFLALEIDERSIDFATQNVNRNSLQNCITVVKGSTQKPIISLPNDNQMYDF 159

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRI 194
            + NPP+        +   ++   P  
Sbjct: 160 CMCNPPFYSDEEEMRVSRSIKQQAPLS 186


>gi|326793495|ref|YP_004311315.1| ribosomal RNA small subunit methyltransferase C [Marinomonas
           mediterranea MMB-1]
 gi|326544259|gb|ADZ89479.1| Ribosomal RNA small subunit methyltransferase C [Marinomonas
           mediterranea MMB-1]
          Length = 353

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 30/178 (16%)

Query: 54  ILGW-RDFYNVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I  W +D      TL      F   +    T LL++         +   +  RILD G G
Sbjct: 162 ITRWEQDIAGQTFTLCSIPGVFGHGKLDKGTALLLEQLEKHRF--MSGVNQARILDFGCG 219

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + + L  +        +D S  AL+  +     N  ++   T+ S+    V+G F+ 
Sbjct: 220 DGVISMWL-HKRTGANVTSLDDSALALKATELTFAENDATDSLTTIASNGLKHVKGRFNY 278

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +V+NPP+   +  D                      S       GV +HL  +G   V
Sbjct: 279 VVTNPPFHTGINTD---------------------YSIAERFFIGVKQHLTLNGELFV 315


>gi|150020463|ref|YP_001305817.1| putative methyltransferase [Thermosipho melanesiensis BI429]
 gi|149792984|gb|ABR30432.1| putative methyltransferase [Thermosipho melanesiensis BI429]
          Length = 184

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 67/184 (36%), Gaps = 42/184 (22%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V  AL   L   +K    ++LDL  G+G   L  L     +    VDIS +A++    N
Sbjct: 28  IVRLALVNMLDLNDK----KVLDLCAGSGIAGLEFLSNGAGY-VTFVDISDRAIKTISKN 82

Query: 141 AVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
                + E+ + ++ D   +  S++  +D++  +PP+                       
Sbjct: 83  VKKLNLKEKVNLIKKDARIFLKSIKEKYDIVFMDPPF----------------------- 119

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---VDVVRIFESRKLFLVNA----F 250
               GL     I   + + L  DG+  VE    +K    D + + + +    V       
Sbjct: 120 ----GLGIVNEILQLICKSLEDDGILIVEHSKREKTTPPDCLEVLKIKNYGDVVIDLYKL 175

Query: 251 KDYG 254
           KD  
Sbjct: 176 KDIS 179


>gi|300021789|ref|YP_003754400.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523610|gb|ADJ22079.1| ribosomal L11 methyltransferase [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 291

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG G+G + +A+ K  P  + V  D+  +++++A  N   NGV+ +    ++   + 
Sbjct: 153 VLDLGCGSGVLAIAVAKSLPHARIVAADMDAQSVKVAAENVRINGVARQIKVTEASATTH 212

Query: 161 VEGL----FDVIVSN 171
            +      FD++++N
Sbjct: 213 PDIRSRAPFDLLIAN 227


>gi|145591720|ref|YP_001153722.1| methyltransferase small [Pyrobaculum arsenaticum DSM 13514]
 gi|145283488|gb|ABP51070.1| methyltransferase small [Pyrobaculum arsenaticum DSM 13514]
          Length = 466

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 22/185 (11%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-----KGVGVDISCKALE 135
           L    +             R+LD G G G    A+L+          + VGV++     E
Sbjct: 19  LAFYMVEKLFRGAPPGGGSRVLDAGCGLGVFIDAVLRWCRGRCAELPEVVGVEVDPALAE 78

Query: 136 IAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            A+         ER   ++ D+       + GLFD ++ NPPY+    +D    E+  + 
Sbjct: 79  AARRRFA----GERVRIVRGDFLLMSAGELGGLFDYVIGNPPYVSYEYIDPPKREL--YK 132

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN-----QKVDVVRIFESRKLFL 246
              +   G      Y    +     L   G                V + R+  S ++  
Sbjct: 133 RLFTTAVGR--FDLYMLFFEKALSLLKPGGRLVFVTPEKYLYVLSAVALRRLLASYRVEE 190

Query: 247 VNAFK 251
           V   +
Sbjct: 191 VELIR 195


>gi|126324739|ref|XP_001376871.1| PREDICTED: similar to HpaII tiny fragments locus 9C [Monodelphis
           domestica]
          Length = 663

 Score = 67.0 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 51/134 (38%), Gaps = 14/134 (10%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
            +  + G +  +     ++  +S   F          +          +    + +LD+ 
Sbjct: 394 PLEHVAGEKYIHEELLGLKFRISPHAFFQVNTPA--AEVLYTTIRDWAQLDGEITVLDVC 451

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFS 159
            GTG + L+L +     + +G+++  +A+E A+ NA  N +        + + L     S
Sbjct: 452 CGTGTIGLSLAQTVK--RVIGIELCQEAVEDARVNAKMNALDNIEFHCGKAEDLVPSLMS 509

Query: 160 SVEGLFDVIVSNPP 173
           S+       + +PP
Sbjct: 510 SLASQRLTAIVDPP 523


>gi|323450036|gb|EGB05920.1| hypothetical protein AURANDRAFT_66085 [Aureococcus anophagefferens]
          Length = 1652

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            AL  + P        RIL+LG GTGAV L +    P  +    D+  +AL + ++NA  
Sbjct: 297 CALFAANPARADLAGRRILELGAGTGAVGLWIALRYPTARVTLTDL-PEALPLIRANAAL 355

Query: 144 NGVSERFDTLQSDWFSSV---EGLFDVIV 169
           NGV++R       +   V   +  FDV+V
Sbjct: 356 NGVADRVRVAPLAFGDPVPSEDDPFDVVV 384


>gi|88798100|ref|ZP_01113687.1| 16S RNA G1207 methylase RsmC [Reinekea sp. MED297]
 gi|88779297|gb|EAR10485.1| 16S RNA G1207 methylase RsmC [Reinekea sp. MED297]
          Length = 319

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +L+ G G+G +  AL K+    +   V+I   A+  A      N ++ +     SD   
Sbjct: 178 ELLEFGAGSGILTSALAKQPSVRRVDAVEIDLLAVRSANRTVQENQLTNKAFIHWSDGLE 237

Query: 160 SVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           S+    +D +VSNPP+ + +              R +        +    +       L 
Sbjct: 238 SLPAQRYDALVSNPPFHQGL--------------RTA-------YAATEKLFAQAHLWLK 276

Query: 219 KDGLCS 224
             G   
Sbjct: 277 PGGQFI 282


>gi|148257404|ref|YP_001241989.1| 50S ribosomal protein L11P methyltransferase [Bradyrhizobium sp.
           BTAi1]
 gi|146409577|gb|ABQ38083.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Bradyrhizobium sp. BTAi1]
          Length = 298

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       R+LDLGTGTG + +A  K       +  DI   ++ +A+ 
Sbjct: 146 LLLDHILKSRVPR-------RVLDLGTGTGVLAIAAAKAQ-HRSVLASDIDPPSVAVARE 197

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
           NA  NGV      +++  F++ +    G FD++++N
Sbjct: 198 NAWLNGVGPLVRVIRATGFAAEDFAKAGPFDLVLAN 233


>gi|327459189|gb|EGF05537.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1057]
          Length = 317

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           RD   +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RDGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPDMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVEIRADVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 291


>gi|126660340|ref|ZP_01731453.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110]
 gi|126618371|gb|EAZ89127.1| hypothetical protein CY0110_12047 [Cyanothece sp. CCY0110]
          Length = 401

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 35/188 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   R+ +RILD G GTG     L+  +P  + VGVDIS KALEIA+     
Sbjct: 41  AAYNFCTGRKPPRENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAEKRCQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           +GV+        F  L  +    +EG FD+I                + V    P     
Sbjct: 101 SGVATNHNYPISFHHLPLEEAEKIEGEFDLINC--------------VGVLHHLP----- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGN 256
              D ++  + +    S+ L   G+  + +        +++ +    LF      DY   
Sbjct: 142 ---DPIAGIKAL----SQKLAPGGIFHIFVYAELGRWEIQLMQKAISLFQTETKGDY--K 192

Query: 257 DRVLLFCR 264
           D V +  +
Sbjct: 193 DGVFVGRK 200


>gi|332686355|ref|YP_004456129.1| putative O-methyltransferase [Melissococcus plutonius ATCC 35311]
 gi|332370364|dbj|BAK21320.1| predicted O-methyltransferase [Melissococcus plutonius ATCC 35311]
          Length = 243

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 80/186 (43%), Gaps = 19/186 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  S + F         +D+ L  + PR+ K+   RI+DL  G GAV L + K++  
Sbjct: 15  DVKIIQSKEVFSFS------LDAVLLANFPRLPKKG--RIVDLCAGNGAVGLFISKKT-K 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
              + +++  +  ++ K +   N + ++      D  ++     +   D++V NPPY + 
Sbjct: 66  APIIQIELQSRLADMGKRSIQLNHLEQQLTMHTLDLKNATSVIKKDSVDLVVCNPPYFKE 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +      +      +++       +    +    S+ L  +G  ++    N+ +D++ 
Sbjct: 126 QTMSQKNPNI-----HLAIARHEI-YTTLEEVIHVSSQLLKTNGRLAMVHRPNRFLDLLN 179

Query: 238 IFESRK 243
           IFE   
Sbjct: 180 IFEKEN 185


>gi|317181189|dbj|BAJ58975.1| hypothetical protein HPF32_1393 [Helicobacter pylori F32]
          Length = 238

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              E++      S       L    ++A  V + L   G    
Sbjct: 118 ---EIKGHARHQSE------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|297380641|gb|ADI35528.1| Hypothetical protein HPV225_1510 [Helicobacter pylori v225d]
          Length = 238

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              E++      S       L    ++A  V + L   G    
Sbjct: 118 ---EIKGHARHQSE------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|225016742|ref|ZP_03705934.1| hypothetical protein CLOSTMETH_00654 [Clostridium methylpentosum
           DSM 5476]
 gi|224950410|gb|EEG31619.1| hypothetical protein CLOSTMETH_00654 [Clostridium methylpentosum
           DSM 5476]
          Length = 306

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG------------WRD 59
             +      + I+      D      + + +   L  E I   +G            W+ 
Sbjct: 53  EELLQKDRSRAIIHIYIEPDQNPLEAV-SFLENRLSIEGIPYQIGTDSVDQEEWATAWQK 111

Query: 60  FYNVRLTLSSDTFE-PRPE--------------------TELLVDSALAFSLPRIEKRDV 98
           +Y+  + +       P  E                    T     + L            
Sbjct: 112 YYH-PIQVGKRVVICPEWEECSIQPDEVKVTLNPGMAFGTGTHETTRLCMQFLEEYVTPS 170

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDW 157
             ILD+G G+G + +  L        VGVDI   A+++A  NA  N +  E+ + L  D 
Sbjct: 171 STILDVGCGSGILSITGLLLGAR-HAVGVDIDELAVKVAGENAALNRITEEQAEFLCGDL 229

Query: 158 FSSVEGLFDVIVSN 171
              V G +D+I +N
Sbjct: 230 TEQVSGQYDIICAN 243


>gi|330943688|ref|XP_003306245.1| hypothetical protein PTT_19361 [Pyrenophora teres f. teres 0-1]
 gi|311316318|gb|EFQ85675.1| hypothetical protein PTT_19361 [Pyrenophora teres f. teres 0-1]
          Length = 254

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 36/204 (17%)

Query: 70  DTFEPRPETELLV-------DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---- 118
             +EP  ++ LL+       ++A   +           +L++G G+G V   +       
Sbjct: 14  RVYEPAEDSYLLLDTLSSASETAYLQNRFGNASSIPPLVLEVGVGSGVVLAFVAANAENI 73

Query: 119 --SPFFKGVGVDISCKALEIAKSN---AVTNGVSER---FDTLQSDWFSSV-EGLFDVIV 169
                   +G+DI+  A + A      A+     +R    D +  D  S++     DV +
Sbjct: 74  FGRHDVLTLGMDINSFACKAAAQTVWGAIEEREKDRSVFVDIVNGDLASAIRPHSVDVFI 133

Query: 170 SNPPYIESVIVD-------CLGLEVRD---FDPRISL-----DGGIDGLSHYRTIADGVS 214
            NPPY+ + + D        +  E +D   F+    L      GG DG+     + D + 
Sbjct: 134 FNPPYVPAELPDPSHHKKYNVIPEGKDTTSFEQDSYLLELSYAGGEDGMVVTNRMLDQIP 193

Query: 215 RHLNKD-GLCSVEIGYNQKVDVVR 237
             L+KD G+  V +    K ++V+
Sbjct: 194 DILSKDRGVAYVLLCAQNKPELVK 217


>gi|238619836|ref|YP_002914662.1| methylase [Sulfolobus islandicus M.16.4]
 gi|238380906|gb|ACR41994.1| methylase [Sulfolobus islandicus M.16.4]
          Length = 207

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N + N        L  D  S +    FDV + NP
Sbjct: 60  ---GGKVIFVDINPYAATSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|227827665|ref|YP_002829445.1| methylase [Sulfolobus islandicus M.14.25]
 gi|229584869|ref|YP_002843371.1| methylase [Sulfolobus islandicus M.16.27]
 gi|227459461|gb|ACP38147.1| methylase [Sulfolobus islandicus M.14.25]
 gi|228019919|gb|ACP55326.1| methylase [Sulfolobus islandicus M.16.27]
 gi|323474723|gb|ADX85329.1| methylase [Sulfolobus islandicus REY15A]
 gi|323477451|gb|ADX82689.1| methylase [Sulfolobus islandicus HVE10/4]
          Length = 207

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N + N        L  D  S +    FDV + NP
Sbjct: 60  ---GGKVIFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|291527807|emb|CBK93393.1| Predicted O-methyltransferase [Eubacterium rectale M104/1]
          Length = 252

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 64/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             RL      F    +  LL D A        + +   R +DL TG G + + L  ++  
Sbjct: 18  GYRLIQDPKLFCFGIDAVLLSDYA--------KVKRGERAVDLCTGNGVIPILLEAKNNG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI-- 175
               G+++  +  ++AK +   N + ++    + D  ++ E       +V+  NPPY+  
Sbjct: 70  EHYSGLELQPQCADLAKRSVKYNHLEDKVTIEEGDVCNASELFGRESVEVVTVNPPYMIG 129

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +      + +   + R +LD           I    ++ L  +G   +  
Sbjct: 130 QHGIKNADDAMTIARHEVRCTLD----------DIVRESAKMLKFNGRFYMVH 172


>gi|83854854|ref|ZP_00948384.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1]
 gi|83842697|gb|EAP81864.1| hypothetical protein NAS141_09001 [Sulfitobacter sp. NAS-14.1]
          Length = 249

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 20/173 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR      VD  L      +  +   R+L+LG G GA  L L    P  +  GV+I  
Sbjct: 22  WQPRKGYRAGVDPVL--LAATVPAQAGQRVLELGCGVGAASLCLGARVPGLQLTGVEIQP 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N      +  F+ +++D      +  +  FD +++NPPY +           
Sbjct: 80  AYAALARRN------NPAFEVVEADIDAMPLALRQRQFDHVLANPPYFDRHASVAATNSG 133

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           R+     +L G    L  +  I    ++ L   G         +  D++R   
Sbjct: 134 RE----TAL-GEATPLETWVKI---AAKRLAPKGQAHFIHRAERLPDLIRALP 178


>gi|317014920|gb|ADU82356.1| hypothetical protein HPGAM_07915 [Helicobacter pylori Gambia94/24]
          Length = 238

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQAFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 QNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|149200876|ref|ZP_01877851.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp.
           TM1035]
 gi|149145209|gb|EDM33235.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp.
           TM1035]
          Length = 408

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R+LD+G G G + L L ++    +  GV +S +   +A   A   G++++      
Sbjct: 172 RPGMRVLDIGCGWGGMGLTLARDF-GAQVTGVTLSQEQHAVANQRAQQAGLADKVRFHLM 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D +  V+G FD IVS                V  F+          G+ HY      V R
Sbjct: 231 D-YRDVKGQFDRIVS----------------VGMFE--------HVGVPHYDAYFATVQR 265

Query: 216 HLNKDGLCSV 225
            L  DG+  +
Sbjct: 266 LLAPDGIALI 275


>gi|147920406|ref|YP_685819.1| putative RNA methyltransferase [uncultured methanogenic archaeon
           RC-I]
 gi|110621215|emb|CAJ36493.1| putative RNA methyltransferase [uncultured methanogenic archaeon
           RC-I]
          Length = 350

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 69/192 (35%), Gaps = 36/192 (18%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIE-----KRDVVRILDLGTGTGAVCLALLK 117
           + + L+  TF  R + +  + +AL  S+          R     LD   G+G +    L 
Sbjct: 166 LHVKLTPATFRYRGQEKQFLSAALKASVAHAMVLISMPRPDDIFLDPFCGSGTI----LA 221

Query: 118 ESPFFK---GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           E    +    +G DIS + LEIA+ N      S R D   +       G  + IVSN P+
Sbjct: 222 ERASCEAKAIIGSDISPERLEIARQN---LPGSIRIDHRDARHTGLPSGSVNKIVSNLPW 278

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            + + V  +     +F                        R L   GL  +    +Q+  
Sbjct: 279 GKQIEVGDVDQLYVEF-------------------LAEAKRLLAPGGLMVLLT--DQEEA 317

Query: 235 VVRIFESRKLFL 246
           + R  ES  L +
Sbjct: 318 ITRAAESCGLHI 329


>gi|71282296|ref|YP_267461.1| ribosomal RNA small subunit methyltransferase D [Colwellia
           psychrerythraea 34H]
 gi|123633824|sp|Q488Q3|RLMG_COLP3 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|71148036|gb|AAZ28509.1| ribosomal RNA small subunit methyltransferase D [Colwellia
           psychrerythraea 34H]
          Length = 392

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 30/146 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDWF 158
           ++DLG G G + L +L   P      +D S  A+  AK N +TN   V E+ +   +D  
Sbjct: 250 VIDLGCGNGVIGLTVLANQPEAHVQFIDESTMAISSAKQNIMTNLPDVIEQCEFTLNDSL 309

Query: 159 SSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           + +E G  D+I+ NPP+ ++                I+             +     R L
Sbjct: 310 TDIEGGSVDLILCNPPFHQNTATTD----------HIAW-----------QMFKDSHRVL 348

Query: 218 NKDGLCSVEIGYNQKVD----VVRIF 239
            K G   + IG NQK+     + R+F
Sbjct: 349 KKGGELRI-IG-NQKLAYHIKLQRLF 372


>gi|296110361|ref|YP_003620742.1| ribosomal protein L11 methyltransferase (putative) [Leuconostoc
           kimchii IMSNU 11154]
 gi|295831892|gb|ADG39773.1| ribosomal protein L11 methyltransferase (putative) [Leuconostoc
           kimchii IMSNU 11154]
          Length = 291

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 41/190 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            + +L   + T     ET  L+  AL   +     R    ++D+GTG+G + +A  K   
Sbjct: 124 MDPKLAFGTGT----HETTQLMIQALETVV-----RGGESMIDVGTGSGVLAVA-AKHLG 173

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVI 179
               +  DI   ++ +AK N + N V+E    + SD    V     D+IV+N        
Sbjct: 174 VASVIATDIDEMSVHVAKENLLLNPVAEDVLVITSDLLVDVHTQPVDIIVAN-------- 225

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRI 238
                         ++             +       L   G   +  I       +   
Sbjct: 226 -------------ILA--------DVIERLIPQTLSLLKPKGYFLISGIYDAIAQHIESQ 264

Query: 239 FESRKLFLVN 248
             +    ++ 
Sbjct: 265 LRTHGYKIIQ 274


>gi|262404628|ref|ZP_06081183.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. RC586]
 gi|262349660|gb|EEY98798.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. RC586]
          Length = 376

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 70/209 (33%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  + +   +   +DLG G G + + L + +
Sbjct: 198 YAISLTNLPNVY-----SGESLDLGARFILEHLPEDPTLEDFIDLGCGNGVLSVRLGQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NPP+ +  
Sbjct: 253 PQAKITCVDESFMAISSAQKNLHNNLGERDIQCVANNCLDGFSAQSSSMIVCNPPFHQQQ 312

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L K G   V     +GY+  V 
Sbjct: 313 TITD----------HIAW-----------QMFCDSKQVLKKGGKLWVIGNRHLGYD--VK 349

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 350 LARLF---GKSHVRVI---ANNSKFVILQ 372


>gi|260768135|ref|ZP_05877069.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii CIP
           102972]
 gi|260616165|gb|EEX41350.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii CIP
           102972]
          Length = 414

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 30/191 (15%)

Query: 39  TNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIE 94
            N+IVR+ ++   H  LG   ++ F + R+  SS  +    ++        +     +++
Sbjct: 134 RNSIVRAKQNIEAHYDLGNDLYQTFLDERMLYSSALYLNTSDSLEQAQIQKMDRLCQQLQ 193

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +  R++++GTG GA+ + + +           IS +    A++     G+  R   L+
Sbjct: 194 LTEHDRVIEIGTGWGAMAIYMAQHY-GCHVTTTTISEEQYAYAQAEVARLGLEARITLLK 252

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D +  ++G FD +VS         ++ +    + + P                      
Sbjct: 253 QD-YRLLDGQFDKLVS---------IEMIEAVGKAYLPSY---------------IAKCQ 287

Query: 215 RHLNKDGLCSV 225
             L   GL ++
Sbjct: 288 SLLKPGGLMAI 298


>gi|195352293|ref|XP_002042647.1| GM14902 [Drosophila sechellia]
 gi|194124531|gb|EDW46574.1| GM14902 [Drosophila sechellia]
          Length = 615

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D  + L +  + F                   +      +    + 
Sbjct: 309 LMLVAGIYSSNLSEDEQAELKEELKSFYEELGKDAPYKCTSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P  +      +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKD----TTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|302380719|ref|ZP_07269184.1| ribosomal protein L11 methyltransferase [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311662|gb|EFK93678.1| ribosomal protein L11 methyltransferase [Finegoldia magna
           ACS-171-V-Col3]
          Length = 307

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 34/151 (22%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + + +  +    +    DI   A+E    NA  N +S   + ++     +
Sbjct: 173 VLDIGCGSGILSV-VSSKLGAKEVFATDIDPLAIEATLENANLNKIS-NINAVKGSLLDN 230

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+  +DV+V+N           L                   L+    +   + + L KD
Sbjct: 231 VDKKYDVVVAN----------IL-------------------LNVLDILIPDLPKALKKD 261

Query: 221 GLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           G+      I  +QK ++V   E   L +V  
Sbjct: 262 GVFICSGLIN-SQKDNIVNTLEKNNLEIVEV 291


>gi|78358540|ref|YP_389989.1| hypothetical protein Dde_3501 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220945|gb|ABB40294.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 275

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               +R LD GTG G V LAL       +G G DI  +  + A  NA   G+  RF  +Q
Sbjct: 52  PAKPLRFLDAGTGCGVVGLALCLLLDTVQGTGFDIDPQLADAATHNAAMLGLGNRFSAVQ 111

Query: 155 SDW------FSSVEGLFDVIVSNPPY 174
           +D              FD++V+NPPY
Sbjct: 112 ADAQQVRAHADITPESFDLVVTNPPY 137


>gi|254495215|ref|ZP_05108139.1| methyltransferase [Polaribacter sp. MED152]
 gi|85819567|gb|EAQ40724.1| methyltransferase [Polaribacter sp. MED152]
          Length = 222

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 17/158 (10%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K +V  ILD+G+GTG + L + + S  F    V+I   A E    N   +   +R     
Sbjct: 17  KDEVDSILDIGSGTGILGLMMAQRSEAFTIDAVEIDEAAYEQTVENFEGSDWGDRLFCYH 76

Query: 155 SDWFS------SVEGLFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           S++          E  +D+++SNPP Y +    +        F   +S +          
Sbjct: 77  SNFIDFADEIVEEEESYDLVISNPPFYSDEFETEDDSRNKARFTSSLSFN---------- 126

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
            +   V++ L+ DG  S  I   ++   + + +S  L 
Sbjct: 127 DLLKNVAKILSDDGQFSTIIPRKEEAIFIDLAKSYDLH 164


>gi|147675659|ref|YP_001218565.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|262167984|ref|ZP_06035683.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27]
 gi|172047477|sp|A5F3S3|PRMA_VIBC3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146317542|gb|ABQ22081.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|227012152|gb|ACP08362.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O395]
 gi|262023517|gb|EEY42219.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC27]
          Length = 295

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPTIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|330951060|gb|EGH51320.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae Cit 7]
          Length = 198

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 43  DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 102

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 103 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 144

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 145 -----NLLRKARQHLKSGGEL 160


>gi|297739444|emb|CBI29626.3| unnamed protein product [Vitis vinifera]
          Length = 1089

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 36/239 (15%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
            ++   + +  G+     + + +    F P   +    +  L      I K     + +L
Sbjct: 69  RIQDIFLDQYEGYCGRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDSIFKDKT--VAEL 125

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ER 149
           G G G + +A+ ++    K  G+DI+ +A++I+  N   N +                +R
Sbjct: 126 GCGNGWISIAIAEKWSPLKVYGLDINPRAVKISWINLYLNALDDNGQPIYDGENKTLLDR 185

Query: 150 FDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLD 197
            +  +SD  +         + IV   P I +   D +   + +              +L 
Sbjct: 186 VEFHESDLLAYCRDRGIELERIVGCIPQILNPNPDAMSKMITENASEEFLYSLSNYCALQ 245

Query: 198 GGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           G ++   GL       +     +   G+    +G    Q V   R+FE R   +   ++
Sbjct: 246 GFVEDQFGLGLIARAVEEGIAVIKPMGIMIFNMGGRPGQGV-CKRLFERRGFRVTRLWQ 303


>gi|225465288|ref|XP_002270977.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1092

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 36/239 (15%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
            ++   + +  G+     + + +    F P   +    +  L      I K     + +L
Sbjct: 69  RIQDIFLDQYEGYCGRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDSIFKDKT--VAEL 125

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ER 149
           G G G + +A+ ++    K  G+DI+ +A++I+  N   N +                +R
Sbjct: 126 GCGNGWISIAIAEKWSPLKVYGLDINPRAVKISWINLYLNALDDNGQPIYDGENKTLLDR 185

Query: 150 FDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLD 197
            +  +SD  +         + IV   P I +   D +   + +              +L 
Sbjct: 186 VEFHESDLLAYCRDRGIELERIVGCIPQILNPNPDAMSKMITENASEEFLYSLSNYCALQ 245

Query: 198 GGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           G ++   GL       +     +   G+    +G    Q V   R+FE R   +   ++
Sbjct: 246 GFVEDQFGLGLIARAVEEGIAVIKPMGIMIFNMGGRPGQGV-CKRLFERRGFRVTRLWQ 303


>gi|195123315|ref|XP_002006153.1| GI18716 [Drosophila mojavensis]
 gi|193911221|gb|EDW10088.1| GI18716 [Drosophila mojavensis]
          Length = 306

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 55/153 (35%), Gaps = 21/153 (13%)

Query: 59  DFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +++ + +  +  +  P    R    L ++  LA              +D+G G+  +   
Sbjct: 65  EYFGLHVDFAPGSLVPTLALRLNYILWLEDLLAPLKLAAVNG-----IDIGCGSSCIYSL 119

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------------E 162
           L  +   +K + ++   + +E A+ N   N +    +  +     S+            +
Sbjct: 120 LAAKKNQWKMLALESKRENIEFARENVKRNELQHLVEVFEQPDKQSIFKSFFESSSALAK 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             F   + NPP+ +S   +      R+ + R +
Sbjct: 180 EQFHFCLCNPPFFDSNAKNPFDANTRNPERRPA 212


>gi|147856453|emb|CAN80765.1| hypothetical protein VITISV_013862 [Vitis vinifera]
          Length = 1098

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 36/239 (15%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
            ++   + +  G+     + + +    F P   +    +  L      I K     + +L
Sbjct: 69  RIQDIFLDQYEGYCGRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDSIFKDKT--VAEL 125

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ER 149
           G G G + +A+ ++    K  G+DI+ +A++I+  N   N +                +R
Sbjct: 126 GCGNGWISIAIAEKWSPLKVYGLDINPRAVKISWINLYLNALDDNGQPIYDGENKTLLDR 185

Query: 150 FDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLD 197
            +  +SD  +         + IV   P I +   D +   + +              +L 
Sbjct: 186 VEFHESDLLAYCRDRGIELERIVGCIPQILNPNPDAMSKMITENASEEFLYSLSNYCALQ 245

Query: 198 GGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           G ++   GL       +     +   G+    +G    Q V   R+FE R   +   ++
Sbjct: 246 GFVEDQFGLGLIARAVEEGIAVIKPMGIMIFNMGGRPGQGV-CKRLFERRGFRVTRLWQ 303


>gi|47227704|emb|CAG09701.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 586

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 7/117 (5%)

Query: 56  GW--RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           GW   +   ++  +S  +F  +  T    +   +      +  +   +LD+  GTG + +
Sbjct: 383 GWIHEELLGLKFRISPHSF-FQVNTGA-AEVLYSAVGEWAQLDEDTTVLDVCCGTGTIGI 440

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +L K     K +G+++  +A+E AK NA  NG++   +            + + +VS
Sbjct: 441 SLAKRVK--KVIGIELCQEAVEDAKVNAQLNGLT-NVEFHCGKAEDVFPNILNAVVS 494


>gi|238063487|ref|ZP_04608196.1| methyltransferase [Micromonospora sp. ATCC 39149]
 gi|237885298|gb|EEP74126.1| methyltransferase [Micromonospora sp. ATCC 39149]
          Length = 497

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 21/176 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            E  L +  A    +    ++ V   LDLGTG+G   L L   +   +    D+S +AL 
Sbjct: 137 SEHVLGIGGATQTLIGATVRQPVESALDLGTGSGVQALHLSTHAR--RVTATDVSQRALR 194

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A + A  NG    ++ L  D  + V G  FD++VSNPP++                  +
Sbjct: 195 FAATTAALNGQD--WELLCGDMVAPVAGRRFDLVVSNPPFVVGPGTTT----------HV 242

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEI-GYNQKVDVVRIFESRKL 244
             D G  G +    +A      L + G        V + G +    V   F    L
Sbjct: 243 YRDSGRVGDAIGAELAAAAPGLLTEGGTMQYLANWVHVAGEDWGDRVAGWFAGTGL 298


>gi|167767912|ref|ZP_02439965.1| hypothetical protein CLOSS21_02454 [Clostridium sp. SS2/1]
 gi|167710241|gb|EDS20820.1| hypothetical protein CLOSS21_02454 [Clostridium sp. SS2/1]
 gi|291560959|emb|CBL39759.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [butyrate-producing bacterium SSC/2]
          Length = 262

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 35/178 (19%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD---ISCK-ALEIAKSN 140
                +  ++     ++LD+G G  A+ +   K  P  +   +D   +    A E  + N
Sbjct: 78  VHEHLIKHLDWDGEGKLLDIGCGAAALTVHCAKAFPKAQITAMDHWGVEWNYAKEQCEKN 137

Query: 141 AVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A   GV++     + D       +  FD +VSN  +                + R +   
Sbjct: 138 AKIEGVADHIAFQKGDAAKLDFPDETFDAVVSNFVF---------------HEVRTA--- 179

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNAF 250
                   R +     R L K G+ S +  ++QK       + VRI +  ++  V+  
Sbjct: 180 -----KDKRDVVKEALRVLKKGGVFSFQDMFSQKALYGDMEEFVRILKEERISEVHYI 232


>gi|327542971|gb|EGF29420.1| ribosomal RNA small subunit methyltransferase C [Rhodopirellula
           baltica WH47]
          Length = 346

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +      F  R      VD A A  +      +   +L+LG G GAV +A    S   
Sbjct: 179 LTVHSRPSVFSHRS-----VDRAAAAMIRHAPIPEGSTVLELGCGNGAVAMAAAMRSKTG 233

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
               VD + +A++  +  A  N +      +  D         D+ + NPPY
Sbjct: 234 HAYAVDCNSRAVQCTERAAAQNQIKNLTAIVNHDGELPNVPPCDIALLNPPY 285


>gi|302810016|ref|XP_002986700.1| hypothetical protein SELMODRAFT_182508 [Selaginella moellendorffii]
 gi|300145588|gb|EFJ12263.1| hypothetical protein SELMODRAFT_182508 [Selaginella moellendorffii]
          Length = 1078

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 70/221 (31%), Gaps = 35/221 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      F P   +    +            RD   + +LG G G V +A+ ++    
Sbjct: 84  LTLLELPSIFIPEDWSFTFYEGINRLPDSGFHDRD---VAELGCGNGWVSIAIAEKLLPR 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS----------------ERFDTLQSDWFSSVEGL-- 164
           K  G+DI+ +A+++A  N   N +S                +R +   SD          
Sbjct: 141 KVYGLDINPRAIKVAWINLYLNALSGEDGSLVIDREGKSLLDRVEFYVSDLLGYCRDRNI 200

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG------------GIDGLSHYRTIAD 211
             D +V   P + +   + +   V +      L                 GL      A+
Sbjct: 201 MLDRVVGCIPQVLNPDPEAMLKLVSENASEDFLYSLSNYCGLQGFVEDQFGLGLIARAAE 260

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFK 251
                +  +G     IG      V  R+FE R   +   ++
Sbjct: 261 EGISVIKPNGAMIFNIGGRPGQAVCERLFERRGFKIAKLWQ 301


>gi|241761758|ref|ZP_04759844.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|260752518|ref|YP_003225411.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|241373672|gb|EER63232.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|258551881|gb|ACV74827.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
          Length = 415

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 54/145 (37%), Gaps = 40/145 (27%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               +++ +   RILD+G G G + L L +     + +GV +S + L+IA+  A   G+ 
Sbjct: 166 HIASKLDLKSGQRILDIGCGWGGMALFLGQ-IADVEVLGVTLSEEQLKIARKRAKEAGLD 224

Query: 148 ERFDTLQSDWFSSVEGLFDVIVS-------NPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +R      D +  V+G FD IVS        PPY                          
Sbjct: 225 DRVKFQLID-YREVKGRFDRIVSVGMFEHVGPPY-------------------------- 257

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                Y+   +     L  DG+  +
Sbjct: 258 -----YKNFFNHCRDLLTDDGVLLL 277


>gi|148651873|ref|YP_001278966.1| methyltransferase small [Psychrobacter sp. PRwf-1]
 gi|148570957|gb|ABQ93016.1| methyltransferase small [Psychrobacter sp. PRwf-1]
          Length = 202

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 11/146 (7%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTF-EPRPETELL-------VDSALAFSLPRIEKRDVV 99
           H     +L   + +   +  + +    P   T          +D+     L  I+ +   
Sbjct: 3   HRPPADLLEKANHWREDIAFTQEVLGAPMHFTTTWGIFSPEKLDAGSLMLLDHIDFQSDD 62

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
             +DLG G G + +   +E P  +   +D    A+E A+ N   NG+S   D   S+ F+
Sbjct: 63  DSIDLGCGYGVLGMTAARECPQGQHTLIDKDFMAVEYARRNCQNNGLS-NVDVHLSNGFN 121

Query: 160 SVEGLFDV--IVSNPPYIESVIVDCL 183
            V+   D   ++SN P         L
Sbjct: 122 HVDPNKDFSLVMSNLPAKVGKEQHYL 147


>gi|56551929|ref|YP_162768.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|56543503|gb|AAV89657.1| Cyclopropane-fatty-acyl-phospholipid synthase [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 415

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 40/145 (27%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               +++ +   RILD+G G G + L L +     + +GV +S + L++A+  A   G+ 
Sbjct: 166 HIASKLDLKSGQRILDIGCGWGGMALFLGQ-IADVEVLGVTLSEEQLKVARKRAKEAGLD 224

Query: 148 ERFDTLQSDWFSSVEGLFDVIVS-------NPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +R      D +  V+G FD IVS        PPY                          
Sbjct: 225 DRVKFQLID-YREVKGRFDRIVSVGMFEHVGPPY-------------------------- 257

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                Y+   +     L  DG+  +
Sbjct: 258 -----YKNFFNHCRDLLTDDGVLLL 277


>gi|110639089|ref|YP_679298.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406]
 gi|123354403|sp|Q11RK8|TRMN6_CYTH3 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|110281770|gb|ABG59956.1| SAM-dependent methyltransferase [Cytophaga hutchinsonii ATCC 33406]
          Length = 238

 Score = 67.0 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 20/172 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DW 157
           ILD+GTGTG + L L + S       V+++  A + A  N   +  +ER         D+
Sbjct: 42  ILDIGTGTGLLALMLAQRS-NADIDAVELNKDAAQQATDNFFNSPWNERLHVHTCSIQDY 100

Query: 158 FSSVEGLFDVIVSNPPYIESVIV-DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           F      +D+IV NPP+  + +       ++      +              +   VS  
Sbjct: 101 FKFTTKQYDLIVCNPPFFSASLKTGNTSKDMALHQSHL----------LIDELIQVVSFM 150

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND----RVLLFCR 264
           L + G   + I   ++V+  +      L  V  F++   N+    R +L  R
Sbjct: 151 LKQSGDAYLLISIYEEVNFFQAANRVGL-NVKRFQEMYDNETKLIRYVLHLR 201


>gi|289433519|ref|YP_003463391.1| hypothetical protein lse_0148 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169763|emb|CBH26299.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 257

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK + V N +  + + ++ D     +      
Sbjct: 66  GIIPL-LLSTRTEAQIVGVEIQPRLADMAKRSVVYNELESQIEMIEHDLKKITDIIPKER 124

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY    +  +       R    +   +L                 S  L + 
Sbjct: 125 ADIVTCNPPYFAGPATSLKNENEHYRIARHEVMCTL----------EDTIRVASNLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 175 GKANFVHRPERLLDILDLMRKYRL 198


>gi|18976623|ref|NP_577980.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638]
 gi|18892190|gb|AAL80375.1| hypothetical protein PF0251 [Pyrococcus furiosus DSM 3638]
          Length = 398

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 44  RSLKHES-IHRIL-GWRDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           R  +    I R+L G   +  +      +  +         +T   +D            
Sbjct: 161 RRREGLPEIERVLLGKEKYRTIIQEGRAKFIVDMR----GQKTGFFLDQRENRLALEKWV 216

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+LD+ T TG   +         + + +D S +A+E AK NA  NGV +R   +  
Sbjct: 217 EPGDRVLDVFTYTGGFAIHAAIAGAE-EVIAIDKSPRAIETAKENAKLNGVEDRIKFIVG 275

Query: 156 DWFSSVEG------LFDVIVSNPPYIESVIVDC 182
             F  +E        FD+++ +PP       D 
Sbjct: 276 SAFEEMEKLQKKGEKFDIVILDPPAFVQHEKDL 308


>gi|302818110|ref|XP_002990729.1| hypothetical protein SELMODRAFT_132291 [Selaginella moellendorffii]
 gi|300141467|gb|EFJ08178.1| hypothetical protein SELMODRAFT_132291 [Selaginella moellendorffii]
          Length = 1078

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 70/221 (31%), Gaps = 35/221 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L      F P   +    +            RD   + +LG G G V +A+ ++    
Sbjct: 84  LTLLELPSIFIPEDWSFTFYEGINRLPDSGFHDRD---VAELGCGNGWVSIAIAEKLLPR 140

Query: 123 KGVGVDISCKALEIAKSNAVTNGVS----------------ERFDTLQSDWFSSVEGL-- 164
           K  G+DI+ +A+++A  N   N +S                +R +   SD          
Sbjct: 141 KVYGLDINPRAIKVAWINLYLNALSGEDGSLVIDREGKSLLDRVEFYVSDLLGYCRDRNI 200

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG------------GIDGLSHYRTIAD 211
             D +V   P + +   + +   V +      L                 GL      A+
Sbjct: 201 MLDRVVGCIPQVLNPDPEAMLKLVSENASEDFLYSLSNYCGLQGFVEDQFGLGLIARAAE 260

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFK 251
                +  +G     IG      V  R+FE R   +   ++
Sbjct: 261 EGISVIKPNGAMIFNIGGRPGQAVCERLFERRGFKIAKLWQ 301


>gi|290565139|gb|ADD39186.1| N-methylase [Streptomyces cacaoi subsp. cacaoi]
          Length = 116

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
            A  D+     RV G+    +    D+V  DR  +     + R      +  + G   F 
Sbjct: 21  DAQHDAERLAARVLGVEVAALP--FDTVPGDRTVWKFRKLVARRADGVPLGHLTGTAVFC 78

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
            + L +    F PR  +    ++ L   L  + +     + D
Sbjct: 79  GLELAVGPGVFVPRVHS----EAVLERGLNAVAEVTAPVVAD 116


>gi|302866075|ref|YP_003834712.1| methyltransferase [Micromonospora aurantiaca ATCC 27029]
 gi|302568934|gb|ADL45136.1| methyltransferase small [Micromonospora aurantiaca ATCC 27029]
          Length = 489

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 32/200 (16%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAV 111
           Y     + +D   P   RP   L  +  L         +    +  V   LDLGTG+G  
Sbjct: 107 YGDDWWVLADV--PASARPGRPLHAEHVLGIGGATQTLISAAVRPTVDTALDLGTGSGVQ 164

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVS 170
            L L   +   +    D+S +AL  A + A  NG    ++ L+ D  + V G  FD++VS
Sbjct: 165 ALHLGTHAR--RVTATDVSERALRFAATTAALNGQD--WELLRGDMVAPVAGRRFDLVVS 220

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-----SV 225
           NPP++                  +  D G  G +    +A      L + G        V
Sbjct: 221 NPPFVVGPGTTT----------HVYRDSGRVGDAIGAELAAAAPDLLTEGGTMQYLANWV 270

Query: 226 EI-GYNQKVDVVRIFESRKL 244
            + G +    V   F    L
Sbjct: 271 HVTGEDWAERVTGWFAGTGL 290


>gi|290962585|ref|YP_003493767.1| hypothetical protein SCAB_82901 [Streptomyces scabiei 87.22]
 gi|260652111|emb|CBG75243.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 386

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 62/182 (34%), Gaps = 36/182 (19%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--G 145
           F     +     R++DLG G G V  A+    P  + V VD S +A+  A++    N  G
Sbjct: 230 FLRQLPQAPAGGRVVDLGCGNGVVGTAVALAGPDAEVVFVDESYQAVASARATYEANRPG 289

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                + L  D       G  D++++NPP+                             +
Sbjct: 290 ADPGAEFLVGDGLEDFPAGSVDLVLNNPPFHSHQATTD---------------------A 328

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
             R +  G  R L   G   V +G       V + RIF + ++           + R ++
Sbjct: 329 TARRMFTGARRALRPGGELWV-VGNRHLGYHVTLRRIFGNGEVV--------ASDPRFVV 379

Query: 262 FC 263
             
Sbjct: 380 LR 381


>gi|327283217|ref|XP_003226338.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like
           [Anolis carolinensis]
          Length = 631

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 14/133 (10%)

Query: 51  IHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +  + G +  Y     +R  +S   F  +  T+   +   +      +      +LD+  
Sbjct: 389 LEHVAGNKYIYEDLLGMRFRISPHAF-FQVNTQA-AEVLYSAIQDWAQVGPETTVLDVCC 446

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSS 160
           GTG + + L K+    K +G+++  +A+E AK NA  N ++       + + L     +S
Sbjct: 447 GTGTIGITLAKKVK--KVIGIELCQEAVEDAKVNAQLNDLNNVEFYCGKAEDLVPQLVNS 504

Query: 161 VEGLFDVIVSNPP 173
           +     + V +PP
Sbjct: 505 LALQNCITVVDPP 517


>gi|269966937|ref|ZP_06181009.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           40B]
 gi|269828420|gb|EEZ82682.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio alginolyticus
           40B]
          Length = 341

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 23/126 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   + K +P       DI+  A+  +++    NG+S R     SD +S
Sbjct: 203 KVLDFGCGAGVLGAFMAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYS 260

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                +  IVSNPP+   +  +    E                     T+     ++L K
Sbjct: 261 DTAKDYRFIVSNPPFHSGLDTNYNAAE---------------------TLLGQAPQYLTK 299

Query: 220 DGLCSV 225
           DG   +
Sbjct: 300 DGEMVI 305


>gi|229075986|ref|ZP_04208959.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock4-18]
 gi|229117809|ref|ZP_04247173.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock1-3]
 gi|228665606|gb|EEL21084.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock1-3]
 gi|228707098|gb|EEL59298.1| Ribosomal protein L11 methyltransferase [Bacillus cereus Rock4-18]
          Length = 312

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 54/220 (24%)

Query: 55  LGWRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-------- 99
             W+ +Y+         +  + + + P    E +++     +                  
Sbjct: 112 TAWKKYYHPVQISDTFTIVPTWEEYTPSSLDEKIIELDPGMAFGTGTHPTTTMCIRALEK 171

Query: 100 ------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+E A+ N   N   +     
Sbjct: 172 TVQSGDTVIDVGTGSGVLSIAAAK-LGASSVQAYDLDPVAVESAEMNVRLNKTDDIVSVG 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q+     +EG  D+IV+N                      ++               +  
Sbjct: 231 QNSLLEGIEGPVDLIVAN---------------------LLA--------EIILLFPEDA 261

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFK 251
           +R +   GL      I   +KV +    E     +    +
Sbjct: 262 ARVVKSGGLFITSGIIAAKEKV-ISEALEKAGFTIEEVLR 300


>gi|170017344|ref|YP_001728263.1| O-methyltransferase [Leuconostoc citreum KM20]
 gi|169804201|gb|ACA82819.1| Predicted O-methyltransferase [Leuconostoc citreum KM20]
          Length = 253

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 27/174 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG----VDISCKALEIAK 138
           D+ L      ++ +     +DLG GTGAV L         K  G    V+I  +  ++AK
Sbjct: 34  DAVLLAHFADVKGKGTGLTVDLGAGTGAVGLFYA-----PKVTGKLALVEIQPELADMAK 88

Query: 139 SNAVTNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPYIESVIV----DCLGLEVRDF 190
            +   N +++R   ++SD    F  +  G  + ++SNPPY               ++   
Sbjct: 89  RSIAMNELTQRVSVIESDMKAIFEDIQPGSVETVLSNPPYFPLNETTKTNHDKHYQLARH 148

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +  I L G          +A  V++ L  +G   +    ++  D+   F SRKL
Sbjct: 149 ELTIDLPG----------LAQVVNKLLKNNGKFYMVHRPDRLADIFAAFASRKL 192


>gi|15612462|ref|NP_224115.1| hypothetical protein jhp1397 [Helicobacter pylori J99]
 gi|4156002|gb|AAD06963.1| putative [Helicobacter pylori J99]
          Length = 238

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 QIKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|14591657|ref|NP_143744.1| hypothetical protein PH1915 [Pyrococcus horikoshii OT3]
 gi|3258357|dbj|BAA31040.1| 396aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 396

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 44  RSLKHES-IHRIL-GWRDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           R  +    I R+L G   +  +      +  +         +T   +D            
Sbjct: 160 RRREGLPEIERVLLGKEKYRTIIQEGRAKFIVDMR----GQKTGFFLDQRENRLALEKWV 215

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+ T TG   +         + +G+D S +A+E AK NA  NGV +R   +  
Sbjct: 216 QPGDRVLDVFTYTGGFAIHAAIAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG 274

Query: 156 DWFSSVEG------LFDVIVSNPPYIESVIVDC 182
             F  +E        FD++V +PP       D 
Sbjct: 275 SAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDL 307


>gi|257870867|ref|ZP_05650520.1| ribosomal protein L11 methyltransferase [Enterococcus gallinarum
           EG2]
 gi|257805031|gb|EEV33853.1| ribosomal protein L11 methyltransferase [Enterococcus gallinarum
           EG2]
          Length = 313

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 63/212 (29%), Gaps = 52/212 (24%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSA---------------------LAFSLPRI 93
             W+ +Y+        T  P  E     D A                     L      +
Sbjct: 112 TAWKKYYHPVRITRYLTIVPSWEQYETTDPAEKIITLDPGMAFGTGTHPTTRLTLQALEM 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    +LD+GTG+G + +A  +     +    D+   A+  AK N   N V+E  +  
Sbjct: 172 YLRGEETVLDVGTGSGVLSIA-SRHLGANQVYAYDLDEVAVRAAKENMALNPVAEAVNVA 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D  + +E   D+IV+N                      ++             +    
Sbjct: 231 ANDLLTGIEIEADIIVAN---------------------ILA--------DIILLMIPDA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
            R L   G   V  I   +K  V+     +  
Sbjct: 262 WRLLKPTGTLIVSGIIEAKKQLVIDAMTEQGF 293


>gi|256545047|ref|ZP_05472414.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
           51170]
 gi|256399250|gb|EEU12860.1| N-6 adenine-specific DNA methylase [Anaerococcus vaginalis ATCC
           51170]
          Length = 233

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 72/180 (40%), Gaps = 28/180 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  +++K  ++  +D+G+G+G + LA        K   ++I  +   + K N 
Sbjct: 25  IDSILLANFSKMKKNKIL--IDIGSGSGILSLACSSYYNLSKVFSIEIQKEKANLLKENI 82

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLF-DVIVSNPPYIESVIVDCLGLEVRDF-----DPRI 194
             NG+    + +  D    +    F D I++NPPY +      +  E ++F     + ++
Sbjct: 83  KLNGI-NNIEVVNDDLNKVNFPNNFCDYIITNPPYYKKG--ANIKNEKKEFLLSRQEIKM 139

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFK 251
           +L    D       I    ++ L   G   +     +   +V I +      L  +   +
Sbjct: 140 NL---SD-------IFRFSNKCLKDKGKLFMIH---KPERLVDIIKESGNLKLKRIKFVQ 186


>gi|291542067|emb|CBL15177.1| Predicted O-methyltransferase [Ruminococcus bromii L2-63]
          Length = 246

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 29/197 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++ +S D++    +T LL D          ++    + +DLGTG G + L   K +  
Sbjct: 12  GIKIYVS-DSYRFSTDTILLADF--------SKQIGAKKCVDLGTGCGTIPLLWYKNNNR 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPY-IE 176
                V+I   A ++   +   N + ++   + SD      +   G FD++  NPPY I 
Sbjct: 63  LDITAVEIQENACKLFSKSLEYNNLQDKIRIVNSDLNKLDGALPLGSFDLVACNPPYKIS 122

Query: 177 SVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              +        V   +   +LD           +    S  L   G   +     +   
Sbjct: 123 GGGITNSENAKLVARHESECTLD----------DVCRCGSSLLQFGGRLCI---CQRPER 169

Query: 235 VVRIFESRKLFLVNAFK 251
           +    E+ + + V   K
Sbjct: 170 LADAMEAMRKYSVEPKK 186


>gi|282903071|ref|ZP_06310963.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282596497|gb|EFC01457.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           C160]
          Length = 241

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N  +  + D F    +  LL            + R    +LDL +G G + L L  + P 
Sbjct: 15  NFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHPR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
               GV+I    +++A+     N V E       D  +         + ++  NPPY + 
Sbjct: 67  -HIEGVEIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFKE 125

Query: 178 VIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   E       +   +L    D +   R +       L + G  ++    ++ +D
Sbjct: 126 NQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRTDRLMD 175

Query: 235 VVRIFESRK 243
           V  +FE RK
Sbjct: 176 V--LFEMRK 182


>gi|116510922|ref|YP_808138.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|123125992|sp|Q033A6|PRMA_LACLS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116106576|gb|ABJ71716.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Lactococcus lactis subsp. cremoris SK11]
          Length = 317

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    DI   A+ +A  N   N   E+     +
Sbjct: 170 RGGETLLDVGTGSGVLSVA-ATYLGAAEIFAYDIDEVAVRVALENIELNPGHEKIHVSAN 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   DVIV+N                      ++             + D   R
Sbjct: 229 NLLEGIDKKADVIVAN---------------------ILA--------DILVLMTDDAFR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            + ++G   +  I  ++   V+   E+   FL
Sbjct: 260 LVKEEGYLIMSGIIADKADMVIASAENAGFFL 291


>gi|255319320|ref|ZP_05360537.1| modification methylase, HemK family [Acinetobacter radioresistens
           SK82]
 gi|262379764|ref|ZP_06072920.1| modification methylase [Acinetobacter radioresistens SH164]
 gi|255303713|gb|EET82913.1| modification methylase, HemK family [Acinetobacter radioresistens
           SK82]
 gi|262299221|gb|EEY87134.1| modification methylase [Acinetobacter radioresistens SH164]
          Length = 319

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 100/265 (37%), Gaps = 36/265 (13%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVR-----SLKHESIHRILGWRDFYNVRL 65
           L  + G +      D  + L   +     + + +       K   +  +      ++   
Sbjct: 50  LADIFGWNRWFYAADLKAPL--FELLKYHDLLEQQEQLFRCKFR-VSSLNDEIFIHSSYP 106

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFFKG 124
           T S +     P+T    +  L   L + ++  V  IL++G+GT A   L   K +P  + 
Sbjct: 107 TTSQNAVFLGPDTYRF-NLHLDCFLKQ-QQFSVSSILEMGSGTAATAILTTKKFNPQPEL 164

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
             VDI+  AL +++ +A  +G+ E+F  + S  +  +   +D+I++NPPY+         
Sbjct: 165 TLVDINPYALLLSELHAEFSGI-EKFRAVNSHLYQEIHEQYDLIIANPPYL--------- 214

Query: 185 LEVRDFDPRISLDGG--IDGLSHYRTIADGVSRHLNKDGLCSVEIG----YNQ---KVDV 235
               D + R    GG  +DG      I      HL ++G   +  G      Q   +  +
Sbjct: 215 ---VDSERRQYRHGGYKMDGAQLAFDIVQQGVTHLYRNGHLFLSTGVAIRNGQSVLQERI 271

Query: 236 VRIFESRK---LFLVNAFKDYGGND 257
              F+ +            D  G +
Sbjct: 272 EEWFKGQSKFTWRWQEIDPDIFGEE 296


>gi|170727958|ref|YP_001761984.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|229470406|sp|B1KD54|RLMG_SHEWM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|169813305|gb|ACA87889.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 419

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 58/171 (33%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      VD S  A+E AK N  
Sbjct: 218 DIGAEIMLENMPKGDFKSIIDLGCGNGILGLHAKQLFPQAYIHFVDDSEMAIESAKQNWA 277

Query: 143 TNGVS------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +       E+      D  + +      D+++ NPP+ +   +             I
Sbjct: 278 LNKLDTQGLVGEQATFGWDDCLTHMSEGVRPDLVLCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESR 242
           +             +     R L   G+  V +G         + RIF++ 
Sbjct: 328 AW-----------QMFLQSWRALKNGGILHV-VGNRHLAYHIKLQRIFKNC 366


>gi|325068459|ref|ZP_08127132.1| hypothetical protein AoriK_11587 [Actinomyces oris K20]
          Length = 152

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 10/99 (10%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T++L+D          +       LDLG G G + LAL   +P  + +  D++ ++L + 
Sbjct: 48  TQVLLDHV-------PDPAQTGTFLDLGCGWGPITLALAGAAPQARVLATDVNERSLALT 100

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPP 173
             NA   G+            + +       D+I SNPP
Sbjct: 101 ARNATAAGLDNVRTAPADALLAELRQSSTPVDLIWSNPP 139


>gi|217031851|ref|ZP_03437354.1| hypothetical protein HPB128_199g59 [Helicobacter pylori B128]
 gi|298735525|ref|YP_003728046.1| hypothetical protein HPB8_25 [Helicobacter pylori B8]
 gi|216946503|gb|EEC25105.1| hypothetical protein HPB128_199g59 [Helicobacter pylori B128]
 gi|298354710|emb|CBI65582.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 238

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F+    D+   +  L+DVIV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDVIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 QIKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|154245322|ref|YP_001416280.1| methyltransferase small [Xanthobacter autotrophicus Py2]
 gi|154159407|gb|ABS66623.1| methyltransferase small [Xanthobacter autotrophicus Py2]
          Length = 256

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 16/140 (11%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R++DLGTG G+  LA L   P    V V+I+ +  ++A+ NA  N +S R + + +D
Sbjct: 45  DRRRMVDLGTGVGSCGLAFLTRVPQASSVLVEIAPELADLARENAALNDLSARVEVVTAD 104

Query: 157 WFS---------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                          G  D++++NPP+ ++     +  +       ++     DG +   
Sbjct: 105 VTRLCRPSGPDVPQVGAADLVLTNPPFNDTA-RHRISPDAARARAHMA-----DG-TLLE 157

Query: 208 TIADGVSRHLNKDGLCSVEI 227
                  R L   G+  +  
Sbjct: 158 EWVRAADRCLAARGVICLIH 177


>gi|313898494|ref|ZP_07832031.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
 gi|312956876|gb|EFR38507.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
          Length = 400

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 30/167 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E     R++D  + TG   L         + V VD+S  AL+ A +NA  N +  R   +
Sbjct: 224 EMAHGKRVMDCFSHTGGFALN-AAYGNASQVVAVDVSQTALDQAYANAKLNHLENRISFV 282

Query: 154 QSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           ++D F  +    EG FD+IV +PP                   R ++D    G   Y+ I
Sbjct: 283 KADVFKYLDTCKEGQFDIIVLDPPAFTKS--------------RRTIDHAYSG---YKRI 325

Query: 210 ADGVSRHLNKDGLCS-------VEIGYNQKVDVVRIFESRKLFLVNA 249
                  L + G          +EI  N +  +    +   + L   
Sbjct: 326 NKQAMMLLGRGGYLITCSCSRFMEI-ENFEKMLRESAQEAGVTLKQV 371


>gi|82750194|ref|YP_415935.1| hypothetical protein SAB0436 [Staphylococcus aureus RF122]
 gi|82655725|emb|CAI80124.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 241

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 30/190 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESP 120
           N  +  + D F    +  LL            + R    +LDL +G G + L L  K   
Sbjct: 15  NFSIIQNDDVFSFSTDALLL--------GHFTKPRTKDIVLDLCSGNGVIPLLLFAKHRR 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIE 176
             +GV  +I    +++A+     N V E       D  +         + ++  NPPY +
Sbjct: 67  HIEGV--EIQKTLVDMARRTFQFNDVDEYLTMHHMDLKNVTKVFKPSQYTLVTCNPPYFK 124

Query: 177 SVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                    E       +   +L    D +   R +       L + G  ++    ++ +
Sbjct: 125 ENQQHQHQKEAHKIARHEIMCTL---EDCMIAARHL-------LKEGGRLNMVHRADRLM 174

Query: 234 DVVRIFESRK 243
           DV  +FE RK
Sbjct: 175 DV--LFEMRK 182


>gi|325478544|gb|EGC81656.1| methyltransferase small domain protein [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 235

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 21/175 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VDS +  +  +++K  V+  LD+G G+G +           K   V+I     ++ K N 
Sbjct: 25  VDSIILGNFAKMKKDKVL--LDIGAGSGVLSFLANSLYDLKKVYAVEIQKDKADLLKENI 82

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISL 196
             N ++   + +  D    +  E   D I++NPPY +         E   +   +  +SL
Sbjct: 83  KLNKLT-NIEVINDDLNNINIKENSLDYIITNPPYYKISDNIGNKNEEFLISRQEKYLSL 141

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           D           I    ++ L   G   +     +   +V IF+      V   +
Sbjct: 142 D----------DIFSFANKSLKDRGRLFMIH---KPERMVEIFQKSGNIKVKRVR 183


>gi|227431626|ref|ZP_03913662.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
 gi|227352618|gb|EEJ42808.1| methyltransferase [Leuconostoc mesenteroides subsp. cremoris ATCC
           19254]
          Length = 254

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 29/193 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +  + D F    +  LL   A       ++ +     +DLG+GTGAV L      P 
Sbjct: 19  NINIIQNPDMFSYSLDAILLAHFA------DVKGKGKGLSVDLGSGTGAVGLFYA---PK 69

Query: 122 F--KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVE-GLFDVIVSNPPYI 175
              +   V+I  +  E+A+ +   N + ER   +Q+D    F+ ++ G  + +++NPPY 
Sbjct: 70  VTGEIKLVEIQPELAEMAQRSIELNNLHERVSVVQADMKNIFNEIKPGSVETVLTNPPYF 129

Query: 176 ESVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                         E+   +  I+             +A   ++ L  +G   +     +
Sbjct: 130 PLTETTKTNIDKHYEIARHELMIN----------IPELAKIANKLLKNNGKVYMVHRPER 179

Query: 232 KVDVVRIFESRKL 244
             D+   F +RKL
Sbjct: 180 LADIFAAFAARKL 192


>gi|58866715|gb|AAW83015.1| precorrin-8w decarboxylase [Escherichia blattae]
          Length = 193

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 29/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L R+E  +   ++D+G GTG++ L    + P  +   ++   +AL +   N  
Sbjct: 17  EAVRALALSRLELHNATTLIDVGAGTGSISLEAALQYPRLRVTAIERKPEALALMAENCR 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G  +    LQ +    +    D I                             GG  G
Sbjct: 77  HFGCEDNIRLLQGEAPLPLAQRADAI---------------------------FIGGSGG 109

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                 + D    HLN  G   +
Sbjct: 110 --QLAALTDWALAHLNPGGRLVM 130


>gi|148266300|ref|YP_001233006.1| ribosomal protein L11 methyltransferase [Geobacter uraniireducens
           Rf4]
 gi|189037696|sp|A5G9G5|PRMA_GEOUR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|146399800|gb|ABQ28433.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter
           uraniireducens Rf4]
          Length = 315

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  D V +LD+GTG+G + +A  K     +   +DI   A+ +A+ N   N         
Sbjct: 174 KHLDPVTVLDVGTGSGVLSIAAAKLGAE-RITAIDIDADAVSVAEENLALNDALPLVAV- 231

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +     V G +D++++N   I +  +  L  E+ D
Sbjct: 232 STTALQDVPGRYDIVLAN---ILAEELVRLAPELVD 264


>gi|229077311|ref|ZP_04209992.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2]
 gi|228706002|gb|EEL58309.1| hypothetical protein bcere0023_360 [Bacillus cereus Rock4-2]
          Length = 338

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSVSSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|212634019|ref|YP_002310544.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
 gi|212555503|gb|ACJ27957.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
          Length = 412

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 58/171 (33%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      +D S  ++  A+ N  
Sbjct: 218 DIGARIMLDNMPKGDFKSIVDLGCGNGILGLHAKQCFPEAYIHFIDDSEMSVASARDNWA 277

Query: 143 TNGVSE------RFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +        +      D  + +   F  D+I+ NPP+ +   +             I
Sbjct: 278 LNKLDNPALVGEQATFAWDDCLTHMSEGFRPDLILCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLDAFRRLKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|149374750|ref|ZP_01892523.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
           algicola DG893]
 gi|149360639|gb|EDM49090.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
           algicola DG893]
          Length = 422

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 41/212 (19%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVV 99
           K+ S H  LG   +  F +  +  SS  + P PE  L  + A    L     +++ +   
Sbjct: 141 KNISAHYDLGNDLFETFLDPTMMYSSAIY-PSPEATL--EQAAVHKLDTICRKLDLQPGD 197

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++++GTG G   +   K           IS + LE+A+       + +R   L  D + 
Sbjct: 198 RVVEIGTGWGGFAVHAAKHY-GCHVTTTTISAEQLELAREKVREEHLEDRITLLFDD-YR 255

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +EG FD +VS        +++ +G +                L  Y      +S+ L  
Sbjct: 256 DLEGQFDKLVS------IEMIEAVGPQF---------------LDSY---FSQISQLLKP 291

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +GL  V     Q +++      R L  V+  +
Sbjct: 292 NGLALV-----QAINMPEQRYKRALKNVDFIQ 318


>gi|89072497|ref|ZP_01159069.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp.
           SKA34]
 gi|89051601|gb|EAR57054.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium sp.
           SKA34]
          Length = 340

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 30/169 (17%)

Query: 59  DFYNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           D   V+LT+      F          D      L  + K    ++LD G G G +   + 
Sbjct: 165 DIAGVQLTVRSLPGVFSHGEF-----DKGSELLLNNLPKLHG-KVLDFGCGAGVIGAVMK 218

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + P       DIS  A+E AK     N +        +D + ++ G +  ++SNPP+  
Sbjct: 219 AKYPTIDLELCDISALAIESAKETFKVNNLDAS-KFTATDVYKTLTGPYQFLISNPPFHA 277

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     ++ F             +      +   R+L  +G   +
Sbjct: 278 G---------LKTF------------YAATELFINDAPRYLRHNGQLVI 305


>gi|281490566|ref|YP_003352546.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
 gi|281374384|gb|ADA63917.1| Ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           lactis KF147]
          Length = 317

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    DI   A+ +A  N   N   E+     +
Sbjct: 170 RGGETLLDVGTGSGVLSVA-ASYLGASEIFAYDIDEVAVRVALENIELNPGHEKIHVSAN 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   DVIV+N                      ++             + +   R
Sbjct: 229 NLLEGIDKKADVIVAN---------------------ILA--------DILVLMTEDAFR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            + ++G   +  I  ++   V+   E    FL
Sbjct: 260 LVKEEGYLIMSGIIADKADMVIASAEKAGFFL 291


>gi|302926886|ref|XP_003054383.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256735324|gb|EEU48670.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 254

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 87/244 (35%), Gaps = 62/244 (25%)

Query: 69  SDTFEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
              +EP  ++ LL+D+  + +    L +        ++++GTG+G V   L   +   + 
Sbjct: 13  ERVYEPAEDSYLLLDTLSSATETAFLNQAFPDAAPLVVEVGTGSGVV---LAFVNAHAQT 69

Query: 125 VGVDIS-----CKALEIAKS------------NAVTNGVSERFDTLQSDWFSSV-EGLFD 166
           +    +           A              N  T+G+     +   D  + + EG  D
Sbjct: 70  LFGTRNILTAGVDMNAFACRATVGTVGKAESDNVDTHGLY--LGSCMGDLVTPLREGSVD 127

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFD------P-------RISL--DGGIDGLSHYRTIAD 211
           V++ NPPY+ +  +          D      P        ++L   GG+DG+     + +
Sbjct: 128 VLIFNPPYVPTPEMPARPESFVADDLAVSAKPSFDDDSYLLALSYAGGLDGMETTDRLIE 187

Query: 212 GVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRK-------------------LFLVNAFK 251
           G+ + L++ G   + +   N+  +V +  +                      L +V  ++
Sbjct: 188 GLPQVLSRRGCAYILLCAQNKPEEVKQRIQRFGPEWRTLTVGTSGKQAGWEKLQIVRIWR 247

Query: 252 DYGG 255
           DY  
Sbjct: 248 DYAN 251


>gi|146313175|ref|YP_001178249.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter sp. 638]
 gi|229564328|sp|A4WER8|RLMG_ENT38 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|145320051|gb|ABP62198.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Enterobacter sp. 638]
          Length = 378

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +       I+DLG G G V L LL+++P    +  D S  A+  ++ N  
Sbjct: 214 DIGARFFLEHLPGNLEGEIVDLGCGNGVVGLTLLEKNPEASVLFTDESPMAVASSRLNVE 273

Query: 143 TNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R + + ++  S VE   F+ ++ NPP+ +                + +L   
Sbjct: 274 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNPPFHQ----------------QHALT-- 315

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
               +    +     R L  +G   +
Sbjct: 316 ---DNVAWEMFHHARRCLKINGELYI 338


>gi|114685137|ref|XP_001166807.1| PREDICTED: HpaII tiny fragments locus 9C isoform 1 [Pan
           troglodytes]
 gi|114685139|ref|XP_001166936.1| PREDICTED: HpaII tiny fragments locus 9C isoform 2 [Pan
           troglodytes]
 gi|114685141|ref|XP_001167055.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A isoform 5
           [Pan troglodytes]
          Length = 625

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSTV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 437 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 494

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 495 TLVSRLASQHLVAILDPP 512


>gi|56807452|ref|ZP_00365406.1| COG4123: Predicted O-methyltransferase [Streptococcus pyogenes M49
           591]
 gi|209559641|ref|YP_002286113.1| hypothetical protein Spy49_1128 [Streptococcus pyogenes NZ131]
 gi|209540842|gb|ACI61418.1| Conserved hypothetical protein [Streptococcus pyogenes NZ131]
          Length = 284

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TTL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|308185275|ref|YP_003929408.1| hypothetical protein HPSJM_07675 [Helicobacter pylori SJM180]
 gi|308061195|gb|ADO03091.1| hypothetical protein HPSJM_07675 [Helicobacter pylori SJM180]
          Length = 238

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F+    D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 QIKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|15678751|ref|NP_275867.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|3183225|sp|O26820|TMG10_METTH RecName: Full=N(2),N(2)-dimethylguanosine tRNA methyltransferase
           Trm-G10; AltName: Full=tRNA:G10 dimethyltransferase
 gi|2621813|gb|AAB85229.1| methyltransferase related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 336

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 21/131 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   RILD   GTG + +         + VG DI  + +E  + N    G+++ F+ ++S
Sbjct: 186 KAGDRILDPFCGTGGILI--EAGLMGVRVVGADIDWRMVEGTRENLQHYGITD-FEVIRS 242

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D     ++   D IV++PPY  S                 +   G      YR   D   
Sbjct: 243 DARDLRLDEKVDAIVTDPPYGIS-----------------ASTAGEKSEKLYREFLDSAH 285

Query: 215 RHLNKDGLCSV 225
            +L + G+  +
Sbjct: 286 SNLAEGGMICM 296


>gi|33322013|gb|AAQ06725.1|AF496069_1 probable methyltransferase [Lactobacillus delbrueckii subsp.
           lactis]
          Length = 206

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 25/150 (16%)

Query: 57  WRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       L +  +   ++P  + + ++               + LA        
Sbjct: 43  WQKYYHVINLSRHLAIVPEWEDYQPAFKDQEIIRLDPGLAFGTGNHQTTQLAMLGIERAM 102

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              + + D+GTG+G + +A   +      +  DIS +++  AK NA  NG+ +     ++
Sbjct: 103 VKPLTVADVGTGSGILAIA-AHKLGAKSVLATDISDESMTAAKENAALNGIHD-IALQKT 160

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
              + V+G FD+IV+N   +  +++D +  
Sbjct: 161 SLLAGVDGKFDLIVAN--ILAEILLDLIPQ 188


>gi|308177713|ref|YP_003917119.1| methyltransferase [Arthrobacter arilaitensis Re117]
 gi|307745176|emb|CBT76148.1| putative methyltransferase [Arthrobacter arilaitensis Re117]
          Length = 403

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 29/151 (19%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T LL++     +LP +   D +  +DL  G G++ +    + P  +    D S  A+ 
Sbjct: 244 PGTRLLLE-----NLPDLSTHDTL--MDLACGNGSIGIFAALQYPSLRVDASDHSASAVA 296

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRI 194
              + A  N + +R   +Q D  S +      +++ NPP+     V              
Sbjct: 297 STLAAAQRNDLGQRITAVQDDALSRLPAQSATLITLNPPFHIGNTVTA------------ 344

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                         + D  +R L   G    
Sbjct: 345 ---------DIAFKLIDDAARVLAPGGTLLC 366


>gi|312115779|ref|YP_004013375.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220908|gb|ADP72276.1| ribosomal L11 methyltransferase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 291

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L R+    V R+LDLGTG+G + +   K        V VD+   A+E+A+ N   NG  
Sbjct: 139 ALERLSPVGVDRVLDLGTGSGVLAIGAAKALGHGPHIVAVDVDPIAVEVARENVRMNGAG 198

Query: 148 ERFDTLQSDWFSSVE----GLFDVIVSN 171
                   D +   +      FDVIV+N
Sbjct: 199 ADIALFTGDGYKPRDAYALAPFDVIVAN 226


>gi|126740545|ref|ZP_01756232.1| hypothetical protein RSK20926_04237 [Roseobacter sp. SK209-2-6]
 gi|126718346|gb|EBA15061.1| hypothetical protein RSK20926_04237 [Roseobacter sp. SK209-2-6]
          Length = 271

 Score = 66.7 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 25/193 (12%)

Query: 60  FYNVRLTLSS------DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           F +  LT            +P+      VD  L      I      ++L+LG G G + L
Sbjct: 20  FASRDLTCDDFLGGKVRLLQPKSGYRAGVDPVL--LAAAIPVHSGQKVLELGCGAGQMLL 77

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIV 169
            L       +  GV++     ++A+ N   N  ++  + +Q+D         +  FD ++
Sbjct: 78  CLGARVADLRLTGVELQPAYADLARRNGCEN--AQDLEIIQADLTHLPTDLRQRQFDHVM 135

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +NPPY  +          R    +++L  G   L  +    D  +R L+  G        
Sbjct: 136 ANPPYFRAGAHSPAQDAGR----QVAL-AGPTPLELW---IDVAARRLSHKGYL---HMI 184

Query: 230 NQKVDVVRIFESR 242
            +   +  +  + 
Sbjct: 185 QRADRLPEMLSAC 197


>gi|290967768|ref|ZP_06559321.1| methyltransferase small domain protein [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290782127|gb|EFD94702.1| methyltransferase small domain protein [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 252

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 62/194 (31%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L    D F    +T LL +       P         +LDLGTGTGA+ L L      
Sbjct: 16  GMKLIQREDQFRFSLDTVLLANFGSVPHSP---------VLDLGTGTGAIPLILTARGVR 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                ++++    +IA  N + N   E       D+         G F  + +NPPY E 
Sbjct: 67  A-VTALELNPIMADIAARNVILNHKEESIRIKHGDYRQPGKWLKSGSFAAVYANPPYREK 125

Query: 178 VIVDCLG-LEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                     +R    +   +L            +    S  L   G   +         
Sbjct: 126 QRGAYSPVPGIRRARHEETATLA----------EVLAAASFALKYGGYFRMVH---IVER 172

Query: 235 VVRIFESRKLFLVN 248
           +  IF   + + + 
Sbjct: 173 LADIFAVMRYYKIE 186


>gi|210135671|ref|YP_002302110.1| hypothetical protein HPP12_1482 [Helicobacter pylori P12]
 gi|210133639|gb|ACJ08630.1| hypothetical protein HPP12_1482 [Helicobacter pylori P12]
          Length = 238

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F+    D+   +  L+DVIV NPP Y    I  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDVIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++   V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLVAKVKKCLKPKGYFIF 150


>gi|92893696|gb|ABE91874.1| SAM (and some other nucleotide) binding motif [Medicago truncatula]
          Length = 1098

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 84/239 (35%), Gaps = 36/239 (15%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
            ++   + +  G++    + + +    F P   +    +          + R    + +L
Sbjct: 69  RIEDILLDQYEGYQGRNKLTMMVIPSIFLPEDWSFTFYEGINRHPDSIFKDR---IVSEL 125

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ER 149
           G G G + +A+ ++    K  G+DI+ +A++I+  N   N +                +R
Sbjct: 126 GCGNGWISIAIAEKWLPSKVYGLDINPRAVKISWINLYLNALDENGQPIYDEEKKTLLDR 185

Query: 150 FDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLD 197
            +  +SD  S         + IV   P I +   D +   + +              +L 
Sbjct: 186 IEFHESDLLSYCRDNGIQLERIVGCIPQILNPNPDAMTKMITENASEEFLHSLSNYCALQ 245

Query: 198 GGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           G ++   GL       +     +  +G+    +G    Q V   R+FE R   +   ++
Sbjct: 246 GFVEDQFGLGLIARAVEEGISVIKPNGIMIFNMGGRPGQGV-CKRLFERRGFRITKLWQ 303


>gi|319405993|emb|CBI79625.1| ribosomal protein L11 methyltransferase [Bartonella sp. AR 15-3]
          Length = 289

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      I+  +    LDLGTG+G + + ++   P    +  DI   A+++AK N   NG
Sbjct: 139 LEMITKVIQDENPQNALDLGTGSGVLAIGIVMLKPIP-VLAADIDPIAVQVAKHNIRFNG 197

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E    +    F   +      FD+IV+N   + + +++     V+             
Sbjct: 198 VTEHVTAVTITDFRDDKVASCAPFDLIVAN--ILANPLIELAHDMVKA------------ 243

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                          L K G   +  I   Q+ DV++ +  + L  +  +
Sbjct: 244 ---------------LQKGGSIILSGILEEQRDDVLKAYIKQGLKHIETY 278


>gi|254719449|ref|ZP_05181260.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|265984454|ref|ZP_06097189.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|306839226|ref|ZP_07472043.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653]
 gi|264663046|gb|EEZ33307.1| ribosomal protein L11 methyltransferase [Brucella sp. 83/13]
 gi|306405773|gb|EFM62035.1| ribosomal protein L11 methyltransferase [Brucella sp. NF 2653]
          Length = 285

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIAKLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQAQGLTHQKTL 274


>gi|238925616|ref|YP_002939133.1| methyltransferase [Eubacterium rectale ATCC 33656]
 gi|238877292|gb|ACR76999.1| methyltransferase [Eubacterium rectale ATCC 33656]
          Length = 252

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 25/173 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             RL      F    +  LL D A        + +   + +DL TG G + + L  ++  
Sbjct: 18  GYRLIQDPKLFCFGIDAVLLSDYA--------KVKRGEKAVDLCTGNGVIPILLEAKNNG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYI-- 175
               G+++  +  ++A+ +   N + ++    + D   + E       +V+  NPPY+  
Sbjct: 70  EHYSGLELQPQCADLARRSVKYNHLEDKVTIEEGDVCKASEIFGRESVEVVTVNPPYMIG 129

Query: 176 -ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +      + +   + R +LD           I    ++ L  +G   +  
Sbjct: 130 QHGIKNADDAMTIARHEVRCTLD----------DIVRESAKMLKFNGRFYMVH 172


>gi|256851270|ref|ZP_05556659.1| O-methyltransferase [Lactobacillus jensenii 27-2-CHN]
 gi|260660694|ref|ZP_05861609.1| O-methyltransferase [Lactobacillus jensenii 115-3-CHN]
 gi|282934738|ref|ZP_06339981.1| O-methyltransferase [Lactobacillus jensenii 208-1]
 gi|297206137|ref|ZP_06923532.1| methyltransferase [Lactobacillus jensenii JV-V16]
 gi|256616332|gb|EEU21520.1| O-methyltransferase [Lactobacillus jensenii 27-2-CHN]
 gi|260548416|gb|EEX24391.1| O-methyltransferase [Lactobacillus jensenii 115-3-CHN]
 gi|281301313|gb|EFA93614.1| O-methyltransferase [Lactobacillus jensenii 208-1]
 gi|297149263|gb|EFH29561.1| methyltransferase [Lactobacillus jensenii JV-V16]
          Length = 336

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           +    E I  I   +    +++    + F    +T LL    L +   R +      I++
Sbjct: 2   KLKNGEKIDHIYSNQ----IQIIQDKEAFSFSLDTILLAAGCLDYIKDRDQ------IVE 51

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--- 160
              G  A  + L   +       ++I   A +  K +   N +  R +    D   +   
Sbjct: 52  FCAGNCAASIYLAHRT-EAHFKTIEIQDHAYDQGKRSVELNHLENRIECFLGDVNDATKF 110

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V    ++++ NPPY +      +    +      +L      L     I    S+ L   
Sbjct: 111 VGRQNNMVLVNPPYFKVAPGHVVNPNEKK-----ALARHEI-LVDLEHIILQASQVLKNK 164

Query: 221 GLCSVEI 227
           G   +  
Sbjct: 165 GRLVMVH 171


>gi|126434000|ref|YP_001069691.1| methyltransferase small [Mycobacterium sp. JLS]
 gi|126233800|gb|ABN97200.1| methyltransferase small [Mycobacterium sp. JLS]
          Length = 507

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 85/209 (40%), Gaps = 26/209 (12%)

Query: 56  GWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           G RDF+   ++   L S     R +  L +  A       + +    R LDLGTG G   
Sbjct: 123 GQRDFFVVSDLDSALRSGAV--RRDHVLGIGGASVSLARAVVREPARRALDLGTGCGIQA 180

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSN 171
           L L   S   + V  D + +AL +A + A  NG+S  +D      F  V G  FD+IVSN
Sbjct: 181 LHLDAHS--SEIVATDTNERALALAAATARLNGMS--WDLRCGSLFEPVAGERFDLIVSN 236

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC------SV 225
           PP++       +G   RD+   I  D G+ G +  R + + VS HL   G         V
Sbjct: 237 PPFV-------VGAGARDY---IYRDSGMVGDALCRNLIERVSDHLEPGGTAHVMANWIV 286

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
             G + +  V        L      ++  
Sbjct: 287 RDGQDWRERVRGWLADTGLHAWVVQRELA 315


>gi|323491700|ref|ZP_08096878.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
 gi|323314062|gb|EGA67148.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           brasiliensis LMG 20546]
          Length = 376

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 78/197 (39%), Gaps = 35/197 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESP 120
           N+ L    + +     +   +D    F L  +     ++ +LDLG G G + + + + +P
Sbjct: 199 NITLNNLPNVY-----SGESLDLGARFMLEHLPTNPGIKHVLDLGCGNGVLSIKMGQLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
             K   +D S  A+E A+ N ++N  SER  + + ++    +     D+++ NPP+ +  
Sbjct: 254 DIKLTCIDESFMAVESARQNLISNLGSERDIECIANNCLDGMPATDVDMVMCNPPFHQQQ 313

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +     + L+  G   V     +GY+    
Sbjct: 314 AITD----------HIAW-----------QMFCDAKQILSVGGQLLVIGNRHLGYD--GK 350

Query: 235 VVRIFESRKLFLVNAFK 251
           + R+F    + +V A K
Sbjct: 351 LSRLFGKSNVKVVAANK 367


>gi|317010122|gb|ADU80702.1| hypothetical protein HPIN_07590 [Helicobacter pylori India7]
          Length = 238

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYAYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F+    D+   +  L+D IV NPP Y    I  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++   V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLVAKVKKCLKPKGYFIF 150


>gi|238749999|ref|ZP_04611503.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia rohdei ATCC 43380]
 gi|238711928|gb|EEQ04142.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia rohdei ATCC 43380]
          Length = 182

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+E    V ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 4   EAVRVLALERLELTGAVHLIDVGAGTGSVALEAALRFPDLRVTAIERNPAALELIAENRQ 63

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G   R D +       +    D I                             GG  G
Sbjct: 64  RLGC-HRVDIIAGIAPLPLPDKADAI---------------------------FIGGSGG 95

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 96  --HLTELIDWALMMLNPGGRLVL 116


>gi|163732319|ref|ZP_02139765.1| hypothetical protein RLO149_02672 [Roseobacter litoralis Och 149]
 gi|161394617|gb|EDQ18940.1| hypothetical protein RLO149_02672 [Roseobacter litoralis Och 149]
          Length = 246

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 50/144 (34%), Gaps = 12/144 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLG G GA  L L    P     GV+      ++A+ N  +       D +      
Sbjct: 44  RVLDLGCGVGAAALCLGARVPGLVLTGVERQPLYADLAQRNGGSTFEVVTADIVDLPLHI 103

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  FD +++NPPY +            D D   +L G    L+ +  I    ++ L  
Sbjct: 104 R-ERQFDHVLANPPYYKRSD----SRAAHDADRETAL-GEETPLADWIKI---AAKRLAP 154

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK 243
            G         +   +  I     
Sbjct: 155 KGYAHFIH---RVERLPEILTEMG 175


>gi|317011638|gb|ADU85385.1| hypothetical protein HPSA_07165 [Helicobacter pylori SouthAfrica7]
          Length = 238

 Score = 66.7 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYAYNSDSLFLYD------FSRPFFKNNGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+DV+V NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDVVVCNPPFYALDSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     + +L+        + ++   V + L   G    
Sbjct: 118 KHKGHARH--QSALN--------FPSLVAKVKKCLKPKGYFIF 150


>gi|297195680|ref|ZP_06913078.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297152901|gb|EDY62886.2| ribosomal RNA small subunit methyltransferase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 384

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 26/150 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            +    R++DLG G G V  A     P  +   VD S  A+  A++    N  S     L
Sbjct: 237 RRHGPARVVDLGCGNGVVGTAAALADPEAEITFVDESYSAVASAEATFQDNVPSGTAKFL 296

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             D  S++ +   D++++NPP+                                R +   
Sbjct: 297 VGDGLSALADASVDLVLNNPPFHSHRATTDTAA---------------------RRMFAD 335

Query: 213 VSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
             R L   G   V +G       V + R+F
Sbjct: 336 ARRALRPGGELWV-VGNRHLGYHVRLRRLF 364


>gi|255019134|ref|ZP_05291260.1| hypothetical protein LmonF_17836 [Listeria monocytogenes FSL
           F2-515]
          Length = 170

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 16/135 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPVRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + VGV+I  +  ++AK +   N + E+ + ++ D  +  +      
Sbjct: 66  GIIPL-LLSTRTEAQIVGVEIQERLADMAKRSISYNQLEEQIEMIEYDLKNITDLIPKER 124

Query: 165 FDVIVSNPPYIESVI 179
            D++  NPPY  +  
Sbjct: 125 ADIVTCNPPYFATPD 139


>gi|289678355|ref|ZP_06499245.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. syringae FF5]
          Length = 207

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 52  DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 111

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 112 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 153

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 154 -----NLLRKARQHLKSGGEL 169


>gi|227499478|ref|ZP_03929589.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC
           35098]
 gi|227218540|gb|EEI83783.1| TrmA family RNA methyltransferase [Anaerococcus tetradius ATCC
           35098]
          Length = 461

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 10/125 (8%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             I    +   +   +S  +F  +P      +     +       + + +LDL +GTG +
Sbjct: 277 EYI--REEMMGLSFKISPFSF-FQPNIFT-AEKLYQKAFDLARIDEKMNVLDLYSGTGTI 332

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVI 168
              +  ++      G++I  +A+E AK NA+ N + +  D L  D    +E     +DV+
Sbjct: 333 TQLMALKAKHA--TGIEIVEEAVEKAKENALLNKI-DNIDFLCGDVLEEIEKVSNRYDVV 389

Query: 169 VSNPP 173
           + +PP
Sbjct: 390 ILDPP 394


>gi|254510350|ref|ZP_05122417.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11]
 gi|221534061|gb|EEE37049.1| SAM-dependent methyltransferase [Rhodobacteraceae bacterium KLH11]
          Length = 400

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +          R+LD+ +  G   LA+L        + VD S  ALE+A
Sbjct: 207 TGLFYDQRPNHAFAAGLVHPQARVLDVFSHVGGFGLAMLAGGAAQ-ALAVDGSAAALELA 265

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              A  +G ++RF T Q D F  +         FDV++ +PP                  
Sbjct: 266 TKGAAASGYADRFQTRQGDAFDMLTQLGQEAATFDVVICDPPAFAPS------------- 312

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +LD    GL  Y  IA   +  +   G   +
Sbjct: 313 -KQALDA---GLRAYERIARLAAPLVKPGGYLGL 342


>gi|91977843|ref|YP_570502.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB5]
 gi|123357306|sp|Q133Y8|PRMA_RHOPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91684299|gb|ABE40601.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisB5]
          Length = 295

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 19/122 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPR--------------IEKRDVVRILDLGTGTGAVCL 113
                 P  +  + +++ALAF                  +       +LDLGTGTG + +
Sbjct: 110 HDRARIPSNKLGIEIEAALAFGTGHHGTTRGCLTLLDLVLRAGPPRSVLDLGTGTGVLAI 169

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIV 169
           A  K       +  DI  +++ +AK NA  NGV    + + +  FS+      G FD+++
Sbjct: 170 AAAKALRQP-VLATDIDRQSVAVAKENARLNGVGNLVEAVHATGFSAPVFAAWGPFDLVL 228

Query: 170 SN 171
           +N
Sbjct: 229 AN 230


>gi|254439341|ref|ZP_05052835.1| Methyltransferase small domain family [Octadecabacter antarcticus
           307]
 gi|198254787|gb|EDY79101.1| Methyltransferase small domain family [Octadecabacter antarcticus
           307]
          Length = 253

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/214 (22%), Positives = 78/214 (36%), Gaps = 27/214 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLTL   T   R      VD  L      +  R    +L+LG GTGA  L L    
Sbjct: 12  FLGGRLTLQQPTKGYRAG----VDPVL--LAAAVRARVGQSVLELGCGTGAALLCLATRV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEG-LFDVIVSNPPYIES 177
                  V++     +I ++NAV N +          D  + +    FD ++ NPPY E 
Sbjct: 66  SGLGLHAVEVQPHYADICRANAVANHIDAMIWTADLRDLPADLRALTFDHVIVNPPYFER 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              +   L  RD    I+  G    +       D  +R L   G  ++     +   +  
Sbjct: 126 ASGNSSPLPDRD----IAFAGDTATVD----WIDTATRRLKPKGTLTLI---QKADRLPD 174

Query: 238 IFES--RKLFLVNAFKDYGGN-----DRVLLFCR 264
           +  +   +L  ++ +    G      DR++L  R
Sbjct: 175 LLRAIDDRLGAIHVYP-ITGRAGRPADRIVLRAR 207


>gi|225376990|ref|ZP_03754211.1| hypothetical protein ROSEINA2194_02632 [Roseburia inulinivorans DSM
           16841]
 gi|225211167|gb|EEG93521.1| hypothetical protein ROSEINA2194_02632 [Roseburia inulinivorans DSM
           16841]
          Length = 475

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 33/154 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKS 139
           +A+   L +   ++  +ILD   G G + +    E     P  +  G+DI   A+++A+ 
Sbjct: 335 AAMLMYLAKPYLKENAQILDPCCGVGTMLI----ERDILVPAREKYGIDIFGDAIDMARE 390

Query: 140 NAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           NA   G  E+ + +  D+F    +  FD IV+N P       + +               
Sbjct: 391 NAALAG--EKINFIHRDYFDFKHDYKFDEIVTNMPVKGKKAKEDMD-------------- 434

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV---EIGY 229
                + Y    +     L +DG+  +   E+G+
Sbjct: 435 -----AFYARFFEKSKSLLAEDGIIIMYSNEVGF 463


>gi|218895170|ref|YP_002443581.1| hypothetical protein BCG9842_B5277 [Bacillus cereus G9842]
 gi|218542779|gb|ACK95173.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 246

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 70/193 (36%), Gaps = 18/193 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GKITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAF 250
           +    ++      
Sbjct: 182 LMRKYRIEPKRVR 194


>gi|118098389|ref|XP_415080.2| PREDICTED: similar to HpaII tiny fragments locus 9C [Gallus gallus]
          Length = 602

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
            +  + G +  Y     ++  +S   F  +  T+   +   A      +      +LD+ 
Sbjct: 341 PLEHVAGDKYIYEELLGLKFRISPHAF-FQVNTQA-AEVLYAAIREWAQLSQESTVLDIC 398

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            GTG + ++L K+    K +G+++  +A++ AK+NA  N +S   +    
Sbjct: 399 CGTGTIGISLAKKVK--KVIGIELCQEAVQDAKANAQINELS-NIEFHCG 445


>gi|315608028|ref|ZP_07883021.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
           33574]
 gi|315250497|gb|EFU30493.1| ribosomal protein L11 methyltransferase [Prevotella buccae ATCC
           33574]
          Length = 288

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 11/131 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RILD G GTG + +A  K     + VG DI   ++E  + NA  N V E F+    D
Sbjct: 152 DGKRILDCGCGTGILGIAAAKMGAR-EVVGYDIDEWSVENTRHNAELNHV-ENFEVYHGD 209

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADG 212
               + V GLFDV+++N     + ++  +     V      + L G  +     R I + 
Sbjct: 210 AHVLNHVNGLFDVVLAN--INRNTLLQDMETFKSVLSHGGVLILSGFYE--QDIRPIVEK 265

Query: 213 VSRH-LNKDGL 222
            ++  L + G 
Sbjct: 266 AAQLGLKETGR 276


>gi|262283463|ref|ZP_06061229.1| ribosomal protein L11 methyltransferase [Streptococcus sp.
           2_1_36FAA]
 gi|262260954|gb|EEY79654.1| ribosomal protein L11 methyltransferase [Streptococcus sp.
           2_1_36FAA]
          Length = 318

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIKADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|269137803|ref|YP_003294503.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|267983463|gb|ACY83292.1| 16S RNA G1207 methylase RsmC [Edwardsiella tarda EIB202]
 gi|304557858|gb|ADM40522.1| 23S rRNA (guanine-N-2-) -methyltransferase RmG [Edwardsiella tarda
           FL6-60]
          Length = 381

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  + +     + DLG G G + LA L  SP  + +  D S  A+  A+ N  
Sbjct: 220 DIGARFFLQHLPEGIQGEVADLGCGNGVLGLAALSSSPQARVLFADESYMAVASARLNVQ 279

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +    +  +  E G  D ++ NPP+ +   +            +++ D  
Sbjct: 280 HNRPQDLARCEFWVGNGLAGREGGTLDAVLCNPPFHQQHSITD----------QVAWD-- 327

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---VDVVRIF 239
                    +     R L ++G   + +G         + R+F
Sbjct: 328 ---------MFVAARRCLKRNGALYI-VGNRHLDYYPKLRRLF 360


>gi|254780014|ref|YP_003058121.1| hypothetical protein HELPY_1477 [Helicobacter pylori B38]
 gi|254001927|emb|CAX30180.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 238

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP Y    I  
Sbjct: 60  SVHLVEKDNKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++A  V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|229520987|ref|ZP_04410408.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM
           11079-80]
 gi|229341872|gb|EEO06873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TM
           11079-80]
          Length = 295

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|332674277|gb|AEE71094.1| methyltransferase [Helicobacter pylori 83]
          Length = 238

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|317179683|dbj|BAJ57471.1| hypothetical protein HPF30_1374 [Helicobacter pylori F30]
          Length = 238

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|213408603|ref|XP_002175072.1| N(5)-glutamine methyltransferase MTQ2 [Schizosaccharomyces
           japonicus yFS275]
 gi|212003119|gb|EEB08779.1| N(5)-glutamine methyltransferase MTQ2 [Schizosaccharomyces
           japonicus yFS275]
          Length = 225

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 78/196 (39%), Gaps = 16/196 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALL--- 116
           ++      D +EP  +T  L+D+    +    EK       ++++G+G+G V        
Sbjct: 10  HLSEKQFWDVYEPAEDTFALLDALEEDAEELREKYKNALPIVVEIGSGSGCVSAFTKYGV 69

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNG---VSERF-DTLQSDWFSSVEGL--FDVIVS 170
            E+        DIS  A   +      N     SE F D + + +  ++      D+++ 
Sbjct: 70  LENVNSLYFSTDISMLACRASSITMAKNKTPSCSESFSDIINTRFIQALRLRKSVDILIF 129

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGY 229
           NPPY+ +     + LE        +  GG DG+     + D +   L+  G+  +  +  
Sbjct: 130 NPPYVPT-ETQEIPLEGTI---AAAWAGGFDGMEVTSKLLDSLDDILSPTGVFYLVTVAR 185

Query: 230 NQKVDVVRIFESRKLF 245
           N+  ++++  E R   
Sbjct: 186 NKPNEIIKQMECRGFK 201


>gi|114685145|ref|XP_001166997.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A isoform 4
           [Pan troglodytes]
          Length = 562

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSTV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 437 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 494

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 495 TLVSRLASQHLVAILDPP 512


>gi|332654575|ref|ZP_08420318.1| putative methyltransferase [Ruminococcaceae bacterium D16]
 gi|332516539|gb|EGJ46145.1| putative methyltransferase [Ruminococcaceae bacterium D16]
          Length = 409

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 23/132 (17%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD  T TG+  L             VD+S  A+++A+ NAV NG+  R D L +D 
Sbjct: 236 GKRVLDCFTHTGSFALNAALGGAE-HVTAVDVSQAAVDLARDNAVRNGLEGRMDFLCADV 294

Query: 158 FSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           F  +  L     +D I+ +PP                   R ++ G       Y+ I   
Sbjct: 295 FDLLPTLEHQPDYDFIILDPPAFTKSRKTA----------RNAMRG-------YKEINYR 337

Query: 213 VSRHLNKDGLCS 224
             + L + G  +
Sbjct: 338 AMKLLPRGGYLA 349


>gi|229524747|ref|ZP_04414152.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv.
           albensis VL426]
 gi|229338328|gb|EEO03345.1| ribosomal protein L11 methyltransferase [Vibrio cholerae bv.
           albensis VL426]
          Length = 295

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ D               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDKIDV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|169335492|ref|ZP_02862685.1| hypothetical protein ANASTE_01906 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258230|gb|EDS72196.1| hypothetical protein ANASTE_01906 [Anaerofustis stercorihominis DSM
           17244]
          Length = 245

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 68/177 (38%), Gaps = 21/177 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +      +   +++DL +G+G + + +  +        V+++     +A+ + 
Sbjct: 26  VDAVLLANFMAKFIKRNDKLIDLCSGSGIIPILIYAKRENKDITMVEVNKDMCSVAEKSL 85

Query: 142 VTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESV---IVDCLGLEVRDFDPRIS 195
             N + +  + + +D      S+   FD +  NPPY ++    I +    ++   +   +
Sbjct: 86  EYNKI-DTINIINNDLNQLDKSLYNKFDSLSVNPPYYKTNSGIISENDNKKIARHEILCN 144

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            D           IA   S+ L   G   +    ++  ++  +    K  L    KD
Sbjct: 145 FD----------DIAKVSSKLLKDKGKFFLVHRTDRFEEI--LLTLNKYRL--TVKD 187


>gi|331084510|ref|ZP_08333611.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330401218|gb|EGG80809.1| hypothetical protein HMPREF0992_02535 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 192

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 32/167 (19%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            E  L +D      +     ++  R+LD+  GTGA+ +AL +++P      +D+S K  E
Sbjct: 15  DEDILPIDEVRRCIVFLSGVKEHTRVLDVACGTGAMFVALQEKNPE-HITAIDVSEKMAE 73

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           IAK+    N +   FD    D+F   +  +D I+    Y      +              
Sbjct: 74  IAKNKVKDNPL---FDVRCGDFFEIEDEKYDCIMIYNAYPHFTDKE-------------- 116

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                        +A  VS+ L  DG   V  G     +V+ +  S 
Sbjct: 117 ------------KLAAKVSQLLTPDGRFVVAHGA--GKEVINLHHSN 149


>gi|260587915|ref|ZP_05853828.1| methyltransferase domain protein [Blautia hansenii DSM 20583]
 gi|260541442|gb|EEX22011.1| methyltransferase domain protein [Blautia hansenii DSM 20583]
          Length = 192

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 32/167 (19%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            E  L +D      +     ++  R+LD+  GTGA+ +AL +++P      +D+S K  E
Sbjct: 15  DEDILPIDEVRRCIVFLSGVKEHTRVLDVACGTGAMFVALQEKNPE-HITAIDVSEKMAE 73

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           IAK+    N +   FD    D+F   +  +D I+    Y      +              
Sbjct: 74  IAKNKVKDNPL---FDVRCGDFFEIEDEKYDCIMIYNAYPHFTDKE-------------- 116

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                        +A  VS+ L  DG   V  G     +V+ +  S 
Sbjct: 117 ------------KLAAKVSQLLTPDGRFVVAHGA--GKEVINLHHSN 149


>gi|242002062|ref|XP_002435674.1| tRNA uracil-5-methyltransferase, putative [Ixodes scapularis]
 gi|215499010|gb|EEC08504.1| tRNA uracil-5-methyltransferase, putative [Ixodes scapularis]
          Length = 494

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 37/175 (21%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF----YNVRLTLSS 69
           V G++S  +        +  Q  F                + G  +       +   +  
Sbjct: 263 VCGVTSLYLQRFDKKRPEGEQAEF--------------EHLFGTTELEERVRGLSFRVGP 308

Query: 70  DTF----EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           D F     P  E  L V   LA   PR        +LD+  GTG + L +  +    +  
Sbjct: 309 DAFFQVNTPAAEVLLEVAEDLAALGPR------TTLLDVCCGTGTIGLCMAAKV--ARVY 360

Query: 126 GVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVI-VSNPP 173
           GV++  +A+E AK NA  NG+        R +    D   ++    D++ V +PP
Sbjct: 361 GVEVCKRAVENAKRNAEANGIGNASFVLGRAEDTMHDVMHTLRDSEDMVAVVDPP 415


>gi|212224934|ref|YP_002308170.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009891|gb|ACJ17273.1| Hypothetical tRNA/rRNA methyltransferase [Thermococcus onnurineus
           NA1]
          Length = 396

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES-IHRIL-GWRDFYNV------RLTL 67
            L   + I++ +  +     F       R  +    I R+L G   +  +      +  +
Sbjct: 134 KLDLAEAIMEAEPEI--ETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIEEGRAKFIV 191

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                    +T   +D            +  +++LD+ T TG   +         K V V
Sbjct: 192 DMR----GQKTGFFLDQRENRIALEKYVKPGMKVLDVFTYTGGFAIHAAVAGAE-KVVAV 246

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVD 181
           D S +A+E+AK NA  NGV++R + +    F  +E        FD+++ +PP       D
Sbjct: 247 DKSPRAIEMAKENAKLNGVADRMEFIVGSAFPVMEEMIKRGEKFDIVILDPPAFVQHEKD 306

Query: 182 C 182
            
Sbjct: 307 L 307


>gi|306844316|ref|ZP_07476908.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1]
 gi|306275388|gb|EFM57129.1| ribosomal protein L11 methyltransferase [Brucella sp. BO1]
          Length = 285

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   I +  +  L   V+             
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN---ILANPLIELAPSVK------------- 237

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                         HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 238 -------------EHLAPGGSIILSGILDSQHDAVLAAYQAQGLTHQKTL 274


>gi|163803356|ref|ZP_02197233.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4]
 gi|159172869|gb|EDP57709.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio sp. AND4]
          Length = 341

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 34/175 (19%)

Query: 53  RI--LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            I  LG +   ++ +      F        L    L  +LP++      R+LD G G G 
Sbjct: 163 YIVTLGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPKLSG----RVLDFGCGAGV 213

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +   + K +P       DI+  A+  +++    N +S +     SD +S     +  I+S
Sbjct: 214 LGAFMAKANPEITIDMCDINAYAITSSQATLKANDISGQVFA--SDIYSDTANDYRFIIS 271

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           NPP+   +  +    E                     T+     +++   G   +
Sbjct: 272 NPPFHSGLDTNYSAAE---------------------TLLGQAPQYMAPKGEMII 305


>gi|146308680|ref|YP_001189145.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
 gi|226712964|sp|A4XYJ7|RSMC_PSEMY RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145576881|gb|ABP86413.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
          Length = 331

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +  AL +  P  +   +D+   AL  ++    
Sbjct: 177 DRGSALLLEHLDSLPQGHLLDFGCGAGVIGAALKRRYPSSRVSLLDVDAFALASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + +      S  G    IVSNPP+ + V       E                
Sbjct: 237 RNGLEA--ELIAGTGIESAPGELAAIVSNPPFHQGVHTHYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    +RHL   G  
Sbjct: 279 -----NLLTQAARHLRDGGEL 294


>gi|308190252|ref|YP_003923183.1| O-methyltransferase [Mycoplasma fermentans JER]
 gi|319777620|ref|YP_004137271.1| DNA methylase [Mycoplasma fermentans M64]
 gi|307624994|gb|ADN69299.1| predicted O-methyltransferase [Mycoplasma fermentans JER]
 gi|318038695|gb|ADV34894.1| DNA methylase [Mycoplasma fermentans M64]
          Length = 261

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 29/179 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              +  +L++G   GA+ + + + +P  K   V+I  KA ++A+ N   N    +   + 
Sbjct: 43  NNKIKNLLEIGANNGALSIFIAERNPNLKIDAVEIQTKACKLAQDNIELNNKQNQIKIIN 102

Query: 155 SDWFS-------SVEGLFDVIVSNPPYI---ESVIVDCLGLEVR--DFDPRISLDGGIDG 202
            D+         +    +D IV NPP+     + +   +  E+     + +I+L      
Sbjct: 103 QDFNEFYLEKIKNAASKYDSIVCNPPFYTMQTNKVSKNISEELLIATHEYKINL------ 156

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRV 259
                 I  G S+ + + G  ++ I   + VD   +          V          R+
Sbjct: 157 ----EQIILGSSKLIEQKGYLTLVIPVERLVDCFCLMRKYNFEPKRVQFI-----IPRM 206


>gi|238809990|dbj|BAH69780.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 263

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 29/179 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
              +  +L++G   GA+ + + + +P  K   V+I  KA ++A+ N   N    +   + 
Sbjct: 45  NNKIKNLLEIGANNGALSIFIAERNPNLKIDAVEIQTKACKLAQDNIELNNKQNQIKIIN 104

Query: 155 SDWFS-------SVEGLFDVIVSNPPYI---ESVIVDCLGLEVR--DFDPRISLDGGIDG 202
            D+         +    +D IV NPP+     + +   +  E+     + +I+L      
Sbjct: 105 QDFNEFYLEKIKNAASKYDSIVCNPPFYTMQTNKVSKNISEELLIATHEYKINL------ 158

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRV 259
                 I  G S+ + + G  ++ I   + VD   +          V          R+
Sbjct: 159 ----EQIILGSSKLIEQKGYLTLVIPVERLVDCFCLMRKYNFEPKRVQFI-----IPRM 208


>gi|116514313|ref|YP_813219.1| O-methyltransferase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093628|gb|ABJ58781.1| Predicted O-methyltransferase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 324

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 60/173 (34%), Gaps = 25/173 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++     +F    +T LL   A          ++  ++++L +G  A  L +       
Sbjct: 6   LKIIQDGQSFAFSLDTLLLAYWAKEAI------KNRSKVVELCSGNAAASLYMA-AFNKA 58

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESV 178
               V++    +  A+ +   N + +R    Q +   +     +  +DV+V NPPY ++ 
Sbjct: 59  HYDDVELQEDIVSKARRSVELNDMQDRITVHQGNVKDAGSFLRKDSYDVVVVNPPYFKAP 118

Query: 179 IVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
               L  +    +   +  I+L            I    +  L   G   +  
Sbjct: 119 AGHKLNPDRSKAIARHELEINL----------EEIIAVSAGLLKMKGKMFMVH 161


>gi|34222389|ref|NP_892029.2| tRNA (uracil-5-)-methyltransferase homolog A [Homo sapiens]
 gi|51173878|ref|NP_073564.3| tRNA (uracil-5-)-methyltransferase homolog A [Homo sapiens]
 gi|51316479|sp|Q8IZ69|TRM2A_HUMAN RecName: Full=tRNA (uracil-5-)-methyltransferase homolog A;
           AltName: Full=HpaII tiny fragments locus 9c protein
 gi|33869861|gb|AAH17184.2| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Homo
           sapiens]
 gi|39644624|gb|AAH13352.2| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Homo
           sapiens]
 gi|47678239|emb|CAG30240.1| Em:AC006547.2 [Homo sapiens]
 gi|80477429|gb|AAI08252.1| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Homo
           sapiens]
 gi|109451268|emb|CAK54495.1| Em:AC006547.C22.2 [synthetic construct]
 gi|109451846|emb|CAK54794.1| Em:AC006547.C22.2 [synthetic construct]
 gi|119623400|gb|EAX02995.1| HpaII tiny fragments locus 9C, isoform CRA_a [Homo sapiens]
 gi|261857608|dbj|BAI45326.1| TRM2 tRNA methyltransferase 2 homolog A [synthetic construct]
          Length = 625

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-I 101
           +   +  + G R    D   +   +S   F    +        L   +    + D    +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSMV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 437 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 494

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 495 TLVSRLASQHLVAILDPP 512


>gi|320035519|gb|EFW17460.1| hypothetical protein CPSG_05903 [Coccidioides posadasii str.
           Silveira]
          Length = 432

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 22/155 (14%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAK 138
           L+D+         +    V  LD+GTG   +   LA  +  P +  V  DI+ K  + A+
Sbjct: 82  LIDTTNDDYRGGYDPEREVVGLDIGTGASCIYPLLACAQ-RPKWMFVATDINDKNFQYAQ 140

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI--------VSNPPYIESVIVDCLGLEVRDF 190
            N   N +  R   +++     +  L D +        + NPP+ ES         ++  
Sbjct: 141 ENVKRNNLQSRIRVVKTTAEDPLIALGDKVPFERLQFTMCNPPFYESEEEMLASANLKHR 200

Query: 191 DPRIS---------LDGGIDGLSHYRTIADGVSRH 216
            P  +           GG +  S  + I D   + 
Sbjct: 201 PPNSACTGAPVEMVTAGGEE--SFVQRIIDESLKL 233


>gi|256853994|ref|ZP_05559359.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|257081740|ref|ZP_05576101.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|257087666|ref|ZP_05582027.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|307290300|ref|ZP_07570216.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0411]
 gi|312900059|ref|ZP_07759376.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0470]
 gi|256710937|gb|EEU25980.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256989770|gb|EEU77072.1| conserved hypothetical protein [Enterococcus faecalis E1Sol]
 gi|256995696|gb|EEU82998.1| conserved hypothetical protein [Enterococcus faecalis D6]
 gi|306498721|gb|EFM68222.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0411]
 gi|311292816|gb|EFQ71372.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0470]
 gi|315025535|gb|EFT37467.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2137]
 gi|315030484|gb|EFT42416.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4000]
 gi|315148659|gb|EFT92675.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4244]
 gi|327535914|gb|AEA94748.1| methyltransferase [Enterococcus faecalis OG1RF]
          Length = 244

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIKIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AKIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|303315303|ref|XP_003067659.1| hypothetical protein CPC735_066140 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107329|gb|EER25514.1| hypothetical protein CPC735_066140 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 442

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 22/155 (14%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAK 138
           L+D+         +    V  LD+GTG   +   LA  +  P +  V  DI+ K  + A+
Sbjct: 92  LIDTTNDDYRGGYDPEREVVGLDIGTGASCIYPLLACAQ-RPKWMFVATDINDKNFQYAQ 150

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI--------VSNPPYIESVIVDCLGLEVRDF 190
            N   N +  R   +++     +  L D +        + NPP+ ES         ++  
Sbjct: 151 ENVKRNNLQSRIRVVKTTAEDPLIALGDKVPFERLQFTMCNPPFYESEEEMLASANLKHR 210

Query: 191 DPRIS---------LDGGIDGLSHYRTIADGVSRH 216
            P  +           GG +  S  + I D   + 
Sbjct: 211 PPNSACTGAPVEMVTAGGEE--SFVQRIIDESLKL 243


>gi|308183607|ref|YP_003927734.1| hypothetical protein HPPC_07380 [Helicobacter pylori PeCan4]
 gi|308065792|gb|ADO07684.1| hypothetical protein HPPC_07380 [Helicobacter pylori PeCan4]
          Length = 238

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+DVIV NPP Y    I  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFKPPI--LYDVIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++A  V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|308062768|gb|ADO04656.1| hypothetical protein HPCU_07580 [Helicobacter pylori Cuz20]
          Length = 238

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+DVIV NPP Y    I  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFKPPI--LYDVIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++A  V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|257079355|ref|ZP_05573716.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           JH1]
 gi|257087180|ref|ZP_05581541.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis D6]
 gi|294779743|ref|ZP_06745130.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           PC1.1]
 gi|307268137|ref|ZP_07549524.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX4248]
 gi|256987385|gb|EEU74687.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           JH1]
 gi|256995210|gb|EEU82512.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis D6]
 gi|294453117|gb|EFG21532.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           PC1.1]
 gi|306515527|gb|EFM84055.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX4248]
 gi|315025981|gb|EFT37913.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX2137]
 gi|329568735|gb|EGG50535.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1467]
          Length = 315

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAVDVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|228918985|ref|ZP_04082365.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840634|gb|EEM85895.1| hypothetical protein bthur0011_220 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 246

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWIPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|291533514|emb|CBL06627.1| Predicted O-methyltransferase [Megamonas hypermegale ART12/1]
          Length = 251

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 71/197 (36%), Gaps = 30/197 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  ++  F    +  LL              R   + LDLGTGTG +   LL  +  
Sbjct: 22  GLKIIQNNKEFCFSIDAVLLAHFV--------TVRKNAKGLDLGTGTGVIP--LLLSNRA 71

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY--I 175
            K   ++I+    EIAK N V N + ++    + D     E       D +VSNPPY  I
Sbjct: 72  MKMDALEINPVTCEIAKRNMVMNKLQDKICVQEGDLCKIKEYYKPQSMDFVVSNPPYRQI 131

Query: 176 ESVIVDCLGLEV-RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
               ++ L        +   +LD         R      S  L + G  ++         
Sbjct: 132 NQGHLNILDGVASARHEITATLD------DVVRA----GSFVLKRKGRFAMVH---LPER 178

Query: 235 VVRIFESRKLFLVNAFK 251
           +  I  +   + + A +
Sbjct: 179 LGEIMVAFHKYNIEAKR 195


>gi|260774377|ref|ZP_05883291.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP
           69.14]
 gi|260610504|gb|EEX35709.1| ribosomal protein L11 methyltransferase [Vibrio metschnikovii CIP
           69.14]
          Length = 295

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 46/197 (23%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P    +L+D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPDPNAVNVLLDPGLAFGTGTHPTTALCLQWLDSLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL+ ++ NA  NGV+++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALQASRDNAERNGVADKIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   +   GL ++ 
Sbjct: 214 -------YLPQNQPENLVADVLVANIL----AGP-----LRELSAVIKSLIKPGGLLAMS 257

Query: 226 EIGYNQKVDVVRIFESR 242
            +   Q  DV   +  +
Sbjct: 258 GVLNTQAEDVATYYRDQ 274


>gi|121586350|ref|ZP_01676139.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80]
 gi|153820015|ref|ZP_01972682.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457]
 gi|153831236|ref|ZP_01983903.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39]
 gi|227080507|ref|YP_002809058.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2]
 gi|229506909|ref|ZP_04396417.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286]
 gi|261210421|ref|ZP_05924715.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341]
 gi|298500926|ref|ZP_07010728.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK
           757]
 gi|254783322|sp|C3LQP9|PRMA_VIBCM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|121549470|gb|EAX59498.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 2740-80]
 gi|126509437|gb|EAZ72031.1| ribosomal protein L11 methyltransferase [Vibrio cholerae NCTC 8457]
 gi|148873279|gb|EDL71414.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 623-39]
 gi|227008395|gb|ACP04607.1| ribosomal protein L11 methyltransferase [Vibrio cholerae M66-2]
 gi|229356014|gb|EEO20933.1| ribosomal protein L11 methyltransferase [Vibrio cholerae BX 330286]
 gi|260840479|gb|EEX67045.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC341]
 gi|297540430|gb|EFH76489.1| LSU ribosomal protein L11 methyltransferase [Vibrio cholerae MAK
           757]
          Length = 295

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|197335296|ref|YP_002155486.1| putative ribosomal RNA small subunit methyltransferase D [Vibrio
           fischeri MJ11]
 gi|229470408|sp|B5FBH8|RLMG_VIBFM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|197316786|gb|ACH66233.1| putative ribosomal RNA small subunit methyltransferase D [Vibrio
           fischeri MJ11]
          Length = 382

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 60/171 (35%), Gaps = 28/171 (16%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  I     +R I+DLG G G + +   + +P  +   VD S  A+E A+ N 
Sbjct: 216 DQGARFMLEHIPSDPELRHIIDLGCGNGVLSVKAGQLNPEARITCVDESFMAVESARRNL 275

Query: 142 VTN-GVSERFDTLQSDWFSSVEGLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N G   +F  + ++     +     +V  NPP+ +   +             I+    
Sbjct: 276 EVNLGKERQFQFIANNCLDGFKKHSSYLVLCNPPFHQGQAITD----------HIAW--- 322

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESRKLFLV 247
                    +       L KDG   V IG         + R+F    +  V
Sbjct: 323 --------QMFCDAKHILCKDGKLLV-IGNRHLDYDGKLCRLFGEENVTTV 364


>gi|160940894|ref|ZP_02088234.1| hypothetical protein CLOBOL_05786 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436138|gb|EDP13905.1| hypothetical protein CLOBOL_05786 [Clostridium bolteae ATCC
           BAA-613]
          Length = 318

 Score = 66.3 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 82/251 (32%), Gaps = 74/251 (29%)

Query: 16  GLSSHQVIVDPDSVLDD---------RQRFFLTNAIVRSLKH---ESIHRILGWRDFYNV 63
           G++     +D D+ + D          +     +   R++     E    I  W+ ++  
Sbjct: 59  GVARISFYLDDDADVADYLRRVEEGLDELSPFADLGARTITASETEDKDWINNWKQYFK- 117

Query: 64  RLTLSSDTFEPRPET-------ELLVD---------------SALAFSLPRIEKRDVVRI 101
             T+     +P  ET       +LLV                      L +   RD + +
Sbjct: 118 PFTVDDILIKPTWETIPEEHKDKLLVQIDPGTAFGTGMHETTQLCIRQLKKYVNRDTL-V 176

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSS 160
           LD+GTG+G + +  LK     +  G D+   A+   + N   N +  +RF  LQ +    
Sbjct: 177 LDVGTGSGILGITALKLGAE-EVWGTDLDENAINAVRENLEANSIPEDRFHVLQGNIIDD 235

Query: 161 VE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           V        G +DV V+N                      ++             + D +
Sbjct: 236 VSVKEWAGYGKYDVAVAN---------------------ILA--------DVIILLVDEI 266

Query: 214 SRHLNKDGLCS 224
             HL K G+  
Sbjct: 267 PAHLKKGGIFI 277


>gi|304439171|ref|ZP_07399089.1| 23S rRNA (uracil-5-)-methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304372303|gb|EFM25891.1| 23S rRNA (uracil-5-)-methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 532

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 53  RILGWRDF-----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            IL  RD+      ++   +   +F    +T       L     +I K     +LDL  G
Sbjct: 250 HILYGRDYVVEKLMDMEFKIGPFSFF---QTNTYSAEVLYTEAEKILKDKGDYLLDLFCG 306

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164
           TG +   L K       +GV+I  +A++ A+ N   NG+      +  D +     +E +
Sbjct: 307 TGTITSILGKNRKEA--LGVEIVEEAVDSARENVELNGLK-NIKFIPGDVYEVVKELENM 363

Query: 165 FDVIVSNPP 173
           +D+IV +PP
Sbjct: 364 YDIIVVDPP 372


>gi|15640321|ref|NP_229948.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121727069|ref|ZP_01680260.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52]
 gi|153801523|ref|ZP_01956109.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3]
 gi|153822832|ref|ZP_01975499.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|153827379|ref|ZP_01980046.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2]
 gi|229509282|ref|ZP_04398765.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|229512698|ref|ZP_04402166.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21]
 gi|229516226|ref|ZP_04405674.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9]
 gi|229527211|ref|ZP_04416604.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)]
 gi|229606422|ref|YP_002877070.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236]
 gi|254286234|ref|ZP_04961193.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226]
 gi|254851429|ref|ZP_05240779.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10]
 gi|255744094|ref|ZP_05418048.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101]
 gi|258624523|ref|ZP_05719467.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603]
 gi|262161984|ref|ZP_06031001.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|262172603|ref|ZP_06040281.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451]
 gi|38605494|sp|Q9KV64|PRMA_VIBCH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|9654704|gb|AAF93467.1| ribosomal protein L11 methyltransferase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121630580|gb|EAX62970.1| ribosomal protein L11 methyltransferase [Vibrio cholerae V52]
 gi|124122928|gb|EAY41671.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-3]
 gi|126519650|gb|EAZ76873.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|149738709|gb|EDM53051.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MZO-2]
 gi|150423649|gb|EDN15591.1| ribosomal protein L11 methyltransferase [Vibrio cholerae AM-19226]
 gi|229335219|gb|EEO00703.1| ribosomal protein L11 methyltransferase [Vibrio cholerae 12129(1)]
 gi|229346652|gb|EEO11622.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC9]
 gi|229350208|gb|EEO15160.1| ribosomal protein L11 methyltransferase [Vibrio cholerae TMA 21]
 gi|229353597|gb|EEO18534.1| ribosomal protein L11 methyltransferase [Vibrio cholerae B33]
 gi|229369077|gb|ACQ59500.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MJ-1236]
 gi|254847134|gb|EET25548.1| ribosomal protein L11 methyltransferase [Vibrio cholerae MO10]
 gi|255738359|gb|EET93750.1| ribosomal protein L11 methyltransferase [Vibrio cholera CIRS 101]
 gi|258583220|gb|EEW08025.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM603]
 gi|261893679|gb|EEY39665.1| ribosomal protein L11 methyltransferase [Vibrio mimicus MB-451]
 gi|262028362|gb|EEY47018.1| ribosomal protein L11 methyltransferase [Vibrio cholerae INDRE
           91/1]
 gi|327483165|gb|AEA77572.1| Ribosomal protein L11 methyltransferase [Vibrio cholerae LMA3894-4]
          Length = 295

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|306827078|ref|ZP_07460375.1| methyltransferase [Streptococcus pyogenes ATCC 10782]
 gi|304430712|gb|EFM33724.1| methyltransferase [Streptococcus pyogenes ATCC 10782]
          Length = 284

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|291441144|ref|ZP_06580534.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291344039|gb|EFE70995.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 384

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 23/138 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R+  R++DLG G G V  +     P  + + VD S +A+  A++    N V    +   
Sbjct: 235 GRNGDRVVDLGCGNGVVGTSAALADPRAEVLFVDESFQAVASARATYRANDVPGHAEFRV 294

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  + V  G  D++++NPP+                             +    +  G 
Sbjct: 295 GDGLAGVPAGSVDLVLNNPPFHSHQATTD---------------------ATAWRMFTGA 333

Query: 214 SRHLNKDGLCSVEIGYNQ 231
            R L   G   V IG   
Sbjct: 334 RRALRPGGELWV-IGNRH 350


>gi|71903806|ref|YP_280610.1| methyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94994653|ref|YP_602751.1| Methyltransferase [Streptococcus pyogenes MGAS10750]
 gi|71802901|gb|AAX72254.1| methyltransferase [Streptococcus pyogenes MGAS6180]
 gi|94548161|gb|ABF38207.1| Methyltransferase [Streptococcus pyogenes MGAS10750]
          Length = 284

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|167837954|ref|ZP_02464813.1| ribosomal protein L11 methyltransferase [Burkholderia thailandensis
           MSMB43]
          Length = 300

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 29/184 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-- 58
           ++A +D    L          +   P   L + +            + + IH  +G +  
Sbjct: 67  VEATQDPAVLLAAAAN--EAGLDETPRFELREVEEQDWVRLTQ--SQFDPIH--IGEKIW 120

Query: 59  --DFYNVRLTLSSDTFEPRP---------ETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
               ++      +   E  P          T  L    L  ++          +LD G G
Sbjct: 121 VVPSWHDAPEPDALVLELDPGLAFGTGSHPTTRLCMEWLEQTVQ-----PGQTVLDYGCG 175

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +G + + L K+       G+DI  +A+E A+ N+  N    R D          +G FD+
Sbjct: 176 SGILAI-LAKKCGAGSVTGIDIDPQAVEAARQNSERN----RTDVAYGLPGDCPDGEFDI 230

Query: 168 IVSN 171
           +V+N
Sbjct: 231 VVAN 234


>gi|94990730|ref|YP_598830.1| methyltransferase [Streptococcus pyogenes MGAS10270]
 gi|94544238|gb|ABF34286.1| Methyltransferase [Streptococcus pyogenes MGAS10270]
          Length = 284

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVACHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|157376568|ref|YP_001475168.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|229470405|sp|A8FYW7|RLMG_SHESH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157318942|gb|ABV38040.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 412

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 33/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  + K D   I+DLG G G + L   +  P      VD S  A+E A+ N  
Sbjct: 218 DIGARIMLDNMPKGDFKSIIDLGCGNGVLGLNAKQLFPQAYIHFVDDSEMAVESARQNWA 277

Query: 143 TNGVS------ERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N +       E+      D  + +      ++I+ NPP+ +   +             I
Sbjct: 278 LNKLDTLGLVGEQATFGWDDCLTHLNEGIRPELILCNPPFHQGEAITD----------HI 327

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
           +             +     R L   G+  V +G       V + RIF++ 
Sbjct: 328 AW-----------QMFLQSWRALKNGGILHV-VGNRHLAYHVKLQRIFKNC 366


>gi|116333959|ref|YP_795486.1| O-methyltransferase [Lactobacillus brevis ATCC 367]
 gi|116099306|gb|ABJ64455.1| Predicted O-methyltransferase [Lactobacillus brevis ATCC 367]
          Length = 248

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 72/193 (37%), Gaps = 17/193 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F    +  LL D A      R+  R   + +DL  G GAV L +  ++  
Sbjct: 16  DIKIIQSPEVFAFSLDAVLLADFA------RLPARATSQTVDLCAGNGAVGLFMSHQTHG 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
            +   V+I  +  ++A+ +   N + +R    + D     + +     DV+  NPPY   
Sbjct: 70  -QIAEVEIQPRLADMARRSIELNQLGDRLSVYEGDLADVTQWIPKDSVDVVTCNPPYF-- 126

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                L    ++ +  +++           T+    S  L   G        ++   + +
Sbjct: 127 ---ADLPDSQKNPNQYLAIARHEIATDLA-TVVATTSGLLKMTGKAYFVHRPDRLGQLFQ 182

Query: 238 IFESRKLFLVNAF 250
           +F   +L      
Sbjct: 183 LFSENRLAPKKVR 195


>gi|30018306|ref|NP_829937.1| methyltransferase [Bacillus cereus ATCC 14579]
 gi|218232737|ref|YP_002364884.1| hypothetical protein BCB4264_A0039 [Bacillus cereus B4264]
 gi|228956476|ref|ZP_04118273.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229039939|ref|ZP_04189704.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676]
 gi|229107721|ref|ZP_04237358.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15]
 gi|229125552|ref|ZP_04254585.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4]
 gi|229142840|ref|ZP_04271283.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24]
 gi|229148444|ref|ZP_04276701.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550]
 gi|229188320|ref|ZP_04315369.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876]
 gi|296500867|ref|YP_003662567.1| methyltransferase [Bacillus thuringiensis BMB171]
 gi|29893846|gb|AAP07138.1| Methyltransferase [Bacillus cereus ATCC 14579]
 gi|218160694|gb|ACK60686.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|228595119|gb|EEK52889.1| hypothetical protein bcere0002_230 [Bacillus cereus ATCC 10876]
 gi|228634986|gb|EEK91558.1| hypothetical protein bcere0011_230 [Bacillus cereus m1550]
 gi|228640603|gb|EEK96990.1| hypothetical protein bcere0012_220 [Bacillus cereus BDRD-ST24]
 gi|228657869|gb|EEL13674.1| hypothetical protein bcere0015_230 [Bacillus cereus BDRD-Cer4]
 gi|228675694|gb|EEL30901.1| hypothetical protein bcere0018_230 [Bacillus cereus Rock1-15]
 gi|228727398|gb|EEL78590.1| hypothetical protein bcere0027_220 [Bacillus cereus AH676]
 gi|228803166|gb|EEM49987.1| hypothetical protein bthur0005_230 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|296321919|gb|ADH04847.1| methyltransferase [Bacillus thuringiensis BMB171]
          Length = 246

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|239932791|ref|ZP_04689744.1| hypothetical protein SghaA1_31498 [Streptomyces ghanaensis ATCC
           14672]
          Length = 380

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 23/138 (16%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R+  R++DLG G G V  +     P  + + VD S +A+  A++    N V    +   
Sbjct: 231 GRNGDRVVDLGCGNGVVGTSAALADPRAEVLFVDESFQAVASARATYRANDVPGHAEFRV 290

Query: 155 SDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D  + V  G  D++++NPP+                             +    +  G 
Sbjct: 291 GDGLAGVPAGSVDLVLNNPPFHSHQATTD---------------------ATAWRMFTGA 329

Query: 214 SRHLNKDGLCSVEIGYNQ 231
            R L   G   V IG   
Sbjct: 330 RRALRPGGELWV-IGNRH 346


>gi|224368264|ref|YP_002602427.1| ribosomal protein L11 methyltransferase [Desulfobacterium
           autotrophicum HRM2]
 gi|259534508|sp|C0QLV7|PRMA_DESAH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|223690980|gb|ACN14263.1| PrmA2 [Desulfobacterium autotrophicum HRM2]
          Length = 303

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 74/218 (33%), Gaps = 58/218 (26%)

Query: 57  WRDFY-------NVRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+DF+        + +  S   FEP+P  ++++D              +A+  +L + + 
Sbjct: 105 WKDFFFVTRITDTLVIRPSWREFEPKPG-DVVIDLDPGMAFGTGTHETTAMCLALVQEQI 163

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQ 154
                 LD+GTG+G + +A  K        G+D    A++IA  N   N +S + F+   
Sbjct: 164 TPGASFLDVGTGSGILMIAAAKLGAG-TLKGLDNDEAAVQIAGKNLEHNRISPQSFEIRC 222

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         FD++V+N                      ++            +I   + 
Sbjct: 223 TTLDRYPHEKFDLVVAN---------------------ILA--------EVIISILPEIH 253

Query: 215 RHLNKDGLCSV---EIGYNQKVDVVRIFESRKLFLVNA 249
             L   G   +    I +     V    E     LV  
Sbjct: 254 SRLAPGGRAILSGIIIAWE--ERVKTALEDNGFTLVKT 289


>gi|99082216|ref|YP_614370.1| 50S ribosomal protein L11P methyltransferase [Ruegeria sp. TM1040]
 gi|99038496|gb|ABF65108.1| LSU ribosomal protein L11P methyltransferase [Ruegeria sp. TM1040]
          Length = 289

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 41/192 (21%)

Query: 73  EPRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLK 117
            P  +  LL+++A+AF                    E  +  ++ D+G GT  + +A  +
Sbjct: 109 VPADKIPLLIEAAMAFGTGHHGTTLGCLKALDHLLCEGFEGKKVADIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  + +  DI   A+++A++N   NG+      L++  F +            P +++
Sbjct: 169 VWPTAQILASDIDEVAVDVAEANMDANGMKGAVACLEAAGFDA------------PALKA 216

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVV 236
                L        P ++L             A  ++ HL   G   +  I   Q  DV+
Sbjct: 217 AAPYDLIFANILKGPLVAL-------------APDMAAHLRAGGYAILSGILNEQADDVI 263

Query: 237 RIFESRKLFLVN 248
            ++    + LV 
Sbjct: 264 AVYAQNGINLVK 275


>gi|268592183|ref|ZP_06126404.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri
           DSM 1131]
 gi|291312585|gb|EFE53038.1| ribosomal RNA small subunit methyltransferase [Providencia rettgeri
           DSM 1131]
          Length = 337

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 59/169 (34%), Gaps = 30/169 (17%)

Query: 57  WRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR +   NVR+      F        L D      L  +       +LDL  G G +   
Sbjct: 159 WRHYQIDNVRINALPGVFS----HNEL-DIGSDLLLSTLTDPMSGDLLDLACGNGVIAAV 213

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L  ++P  K    D+S  AL+ A S    N ++   + + SD +S +   FD I+SNPP+
Sbjct: 214 LGSQNPELKLTLSDVSASALDSAASTLEANKLAG--EIIASDAYSDINDKFDWIISNPPF 271

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                 DG          +     ++L K G  
Sbjct: 272 H---------------------DGLNTSYRAVENMIYQAPKYLKKGGHL 299


>gi|170761495|ref|YP_001788270.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A3
           str. Loch Maree]
 gi|226710066|sp|B1KZN5|PRMA_CLOBM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169408484|gb|ACA56895.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A3
           str. Loch Maree]
          Length = 312

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VEG  +++V+N           +  +V  F                  + +GV  
Sbjct: 233 NLMEVVEGRANIVVAN-----------IIADVIIF------------------LTEGVKA 263

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            + K G       I    K DV++  E     +    
Sbjct: 264 FIEKGGYFIASGIINSR-KEDVIKKLEETGFVIEEVR 299


>gi|188528274|ref|YP_001910961.1| hypothetical protein HPSH_07720 [Helicobacter pylori Shi470]
 gi|188144514|gb|ACD48931.1| hypothetical protein HPSH_07720 [Helicobacter pylori Shi470]
          Length = 238

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP Y    I  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++A  V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLAAKVKKCLKPKGYFIF 150


>gi|89095195|ref|ZP_01168119.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92]
 gi|89080553|gb|EAR59801.1| hypothetical protein MED92_08565 [Oceanospirillum sp. MED92]
          Length = 378

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 64/164 (39%), Gaps = 30/164 (18%)

Query: 83  DSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  +   D   RI+DLG G G V L   + +P  +   VD S  A+  A  N 
Sbjct: 218 DIGTRFFLQHLPDEDKYQRIIDLGCGNGVVGLMAAERNPSAELTFVDESFMAVASASENF 277

Query: 142 VTNGVSERFD-TLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                + R    L +D    +E    D+I++NPP+ +  +       V DF   I+L   
Sbjct: 278 NAAFANTRTGSFLATDCLKGIEKNSADLILNNPPFHQQNV-------VGDF---IAL--- 324

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVDVVRIF 239
                    +       L K G   V     +GY+Q   + ++F
Sbjct: 325 --------QMFREAKSVLKKGGEIWVIGNRHLGYHQ--RLKKLF 358


>gi|71420165|ref|XP_811388.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876047|gb|EAN89537.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 568

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R  LS  +F     + +  +  L  +           +LDL  GTG + L L K    
Sbjct: 367 GLRFELSPTSFFQVNTSGM--ELLLCETAKVAALGPKTTLLDLCCGTGVIGLTLAKHVK- 423

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV--EGLFDVI-VSNP 172
            + +G+++   A+  A+ NA  N ++       R + L  D  +S+  E   D++ + +P
Sbjct: 424 -RVIGIELVESAVNDARQNAKRNDIANVTFCSGRVEHLLPDIINSLPEEDKTDIVAILDP 482

Query: 173 P 173
           P
Sbjct: 483 P 483


>gi|284997868|ref|YP_003419635.1| putative methylase [Sulfolobus islandicus L.D.8.5]
 gi|284445763|gb|ADB87265.1| putative methylase [Sulfolobus islandicus L.D.8.5]
          Length = 207

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N + N  S     L  D  S +    FDV + NP
Sbjct: 60  ---GGKVMFVDINPYATTSTLCSLKVNNLYNS-SNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|241895700|ref|ZP_04782996.1| ribosomal protein L11 methyltransferase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871067|gb|EER74818.1| ribosomal protein L11 methyltransferase [Weissella
           paramesenteroides ATCC 33313]
          Length = 317

 Score = 66.3 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 55/225 (24%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLV---DSA------------------LAFSLPRIEK 95
           W+ +Y+        T  P+ E    V   +                    L      +  
Sbjct: 114 WQKYYHPVRVTRHITIVPKWEDYQPVQTDEQVIVLDPGMAFGTGTHPTTKLMIQALEVIV 173

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++DLGTG+G + +A  +     + +G DI   A++ A+ N   N  +     + S
Sbjct: 174 RGGESVIDLGTGSGVLGIA-ARLLGAGEILGTDIDEVAVKSAQGNVDLNPKAADMTLIVS 232

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D    V E  +D++++N           +  EV D                   +   V+
Sbjct: 233 DLLKDVPEKKYDIVIAN-----------MLAEVLDM------------------LIPNVN 263

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK--DYGGN 256
             L  +G   +  I Y+++  ++     + L +  + K  D+ G 
Sbjct: 264 DILQPNGHLLLSGIYYDKRDKIIDALTEQGLVVEQSTKLGDWYGI 308


>gi|315301031|ref|ZP_07872350.1| methyltransferase small domain-containing protein [Listeria
           ivanovii FSL F6-596]
 gi|313630597|gb|EFR98411.1| methyltransferase small domain-containing protein [Listeria
           ivanovii FSL F6-596]
          Length = 257

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      + +GV+I  +  ++AK + V N +  + + ++ D     +      
Sbjct: 66  GIIPL-LLSTRTEAQIIGVEIQPRLADMAKRSVVYNELESQIEMMEYDLKKITDIIPKER 124

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY    +  +       R    +   +L                 S  L + 
Sbjct: 125 ADIVTCNPPYFAGPATSLKNENEHYRIARHEVMCTL----------EDTIRVASNLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 175 GKANFVHRPERLLDILDLMRKYRL 198


>gi|164688893|ref|ZP_02212921.1| hypothetical protein CLOBAR_02541 [Clostridium bartlettii DSM
          16795]
 gi|164602097|gb|EDQ95562.1| hypothetical protein CLOBAR_02541 [Clostridium bartlettii DSM
          16795]
          Length = 86

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 3  ALRDSHSFLCRVTG-LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
             D    L +  G + S  + +  D  L D Q  +    I   L    I  I+G R+F 
Sbjct: 21 PRLDVEMLLKKALGDVDSMYIRMYLDKELTDEQEKYFLEMIKERLNERPIAYIIGNREFM 80

Query: 62 NVRLTL 67
           +   L
Sbjct: 81 GLDFLL 86


>gi|328945351|gb|EGG39504.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1087]
          Length = 317

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVEIKADVIVAN---------------------ILA--------DILVHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 291


>gi|326528795|dbj|BAJ97419.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1103

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 36/210 (17%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F P   +    +            +    + +LG G G + +AL ++    K  G+D
Sbjct: 111 PSIFIPEDWSFTFYEGLNRHPDSIFRDK---TVAELGCGNGWISIALAEKWCPSKVYGLD 167

Query: 129 ISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWFS---SVEGLFDVIVS 170
           I+ +A++IA  N   N +                +R +  +SD  S     +   D IV 
Sbjct: 168 INPRAIKIAWINLYLNALDDDGLPIYDAEGKTLLDRVEFYESDLLSYCRDNKIELDRIVG 227

Query: 171 NPPYIESVIVDCLGLEVRDF--DPRI-------SLDGGID---GLSHYRTIADGVSRHLN 218
             P I +   + +   V +   +  +       +L G ++   GL       +     + 
Sbjct: 228 CIPQILNPNPEAMSKIVTENSSEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGISVIK 287

Query: 219 KDGLCSVEIG--YNQKVDVVRIFESRKLFL 246
             GL    +G    Q V   R+F  R   +
Sbjct: 288 PSGLMVFNMGGRPGQGV-CERLFLRRGFRI 316


>gi|261250290|ref|ZP_05942866.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
 gi|260939406|gb|EEX95392.1| ribosomal RNA small subunit methyltransferase C [Vibrio orientalis
           CIP 102891]
          Length = 340

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 14/128 (10%)

Query: 62  NVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++ +      F   E    ++LL+D     +LP +      ++LD G G G +   +   
Sbjct: 171 SLTIKSLPGVFSHGEFDIGSKLLLD-----TLPALSG----KVLDFGCGAGVIGSVMAIL 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +P  +    DIS  A+E +K+    NG+S R     SD +S     +  I+SNPP+   +
Sbjct: 222 NPEIELEMCDISALAVESSKATLAANGLSGRVFA--SDIYSDTSNDYHFIISNPPFHAGL 279

Query: 179 IVDCLGLE 186
                  E
Sbjct: 280 DTSYSATE 287


>gi|168179388|ref|ZP_02614052.1| ribosomal protein L11 methyltransferase [Clostridium botulinum NCTC
           2916]
 gi|182669588|gb|EDT81564.1| ribosomal protein L11 methyltransferase [Clostridium botulinum NCTC
           2916]
          Length = 312

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VEG  +++V+N           +  +V  F                  + +GV  
Sbjct: 233 NLMEVVEGRANIVVAN-----------IIADVIIF------------------LTEGVKA 263

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            + K G       I    K DV++  E     +    
Sbjct: 264 FIEKGGYFIASGIINSR-KEDVIKKLEETGFIIEEVR 299


>gi|153940913|ref|YP_001392234.1| ribosomal protein L11 methyltransferase [Clostridium botulinum F
           str. Langeland]
 gi|170754529|ref|YP_001782590.1| ribosomal protein L11 methyltransferase [Clostridium botulinum B1
           str. Okra]
 gi|166223409|sp|A7GHH4|PRMA_CLOBL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710065|sp|B1ILM1|PRMA_CLOBK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|152936809|gb|ABS42307.1| ribosomal protein L11 methyltransferase [Clostridium botulinum F
           str. Langeland]
 gi|169119741|gb|ACA43577.1| ribosomal protein L11 methyltransferase [Clostridium botulinum B1
           str. Okra]
 gi|295320232|gb|ADG00610.1| ribosomal protein L11 methyltransferase [Clostridium botulinum F
           str. 230613]
          Length = 312

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VEG  +++V+N           +  +V  F                  + +GV  
Sbjct: 233 NLMEVVEGRANIVVAN-----------IIADVIIF------------------LTEGVKA 263

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            + K G       I    K DV++  E     +    
Sbjct: 264 FIEKGGYFIASGIINSR-KEDVIKKLEETGFIIEEVR 299


>gi|148380909|ref|YP_001255450.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. ATCC 3502]
 gi|153933190|ref|YP_001385217.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. ATCC 19397]
 gi|153935106|ref|YP_001388686.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. Hall]
 gi|226950383|ref|YP_002805474.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A2
           str. Kyoto]
 gi|166223407|sp|A7FXL3|PRMA_CLOB1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223408|sp|A5I638|PRMA_CLOBH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254783051|sp|C1FVT8|PRMA_CLOBJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|148290393|emb|CAL84520.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. ATCC 3502]
 gi|152929234|gb|ABS34734.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. ATCC 19397]
 gi|152931020|gb|ABS36519.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A
           str. Hall]
 gi|226840767|gb|ACO83433.1| ribosomal protein L11 methyltransferase [Clostridium botulinum A2
           str. Kyoto]
          Length = 312

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VEG  +++V+N           +  +V  F                  + +GV  
Sbjct: 233 NLMEVVEGRANIVVAN-----------IIADVIIF------------------LTEGVKA 263

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            + K G       I    K DV++  E     +    
Sbjct: 264 FIEKGGYFIASGIINSR-KEDVIKKLEETGFIIEEVR 299


>gi|10437555|dbj|BAB15067.1| unnamed protein product [Homo sapiens]
          Length = 475

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-I 101
           +   +  + G R    D   +   +S   F    +        L   +    + D    +
Sbjct: 230 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSMV 286

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 287 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 344

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 345 TLVSRLASQHLVAILDPP 362


>gi|57504746|ref|ZP_00370800.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|305433049|ref|ZP_07402205.1| possible rRNA methyltransferase [Campylobacter coli JV20]
 gi|57019402|gb|EAL56100.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|304443750|gb|EFM36407.1| possible rRNA methyltransferase [Campylobacter coli JV20]
          Length = 233

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 22/167 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++L   SD +    ++ LL D  L   +         ++L++G+G G + + L K    
Sbjct: 4   SIKLAQLSDGYRYNSDSLLLADFVLEMGIKN-------QVLEVGSGCGIIGILLKKFVSN 56

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV-- 178
                +DI  + +E+   N   N +  +   L  D+ +   +  FD IV NPP+      
Sbjct: 57  LDLSLLDIQQENIELIHRNLKQNNI--QAGVLHEDFRNFQNDKKFDFIVCNPPFYRDGAH 114

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   +  F   ++L+                +  L   G+   
Sbjct: 115 EGKNTHKNISKFQKYLTLN----------EFIVRSNALLKPMGVLYF 151


>gi|311271117|ref|XP_001927820.2| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like [Sus
           scrofa]
          Length = 621

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 11/129 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G    + D   +   +S   F    +        L   +    +      +
Sbjct: 376 EGLPLEHVAGDQCIYEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDTGSTV 432

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL ++    + VGV++S +A++ A+ NA+ N +S   +         V
Sbjct: 433 LDVCCGTGTIGLALARKVK--RVVGVELSQEAVDDARVNALDNELS-NVEFHCGRAEDLV 489

Query: 162 EGLFDVIVS 170
             L   + S
Sbjct: 490 PPLVSRLAS 498


>gi|6959523|gb|AAF33140.1|AF196567_16 putative methyltransferase [Pseudomonas stutzeri]
          Length = 351

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 61/201 (30%), Gaps = 56/201 (27%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++ALA      E + + R LDLG G G V +AL +  P   G   ++   A  +A+ N 
Sbjct: 168 VEAALAIVARLPELKGIRRFLDLGCGPGMVAIALARALPGCHGTAFELPPTA-AVARQNV 226

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
               +  R   L  D      G  +D+I                  V  F P ++     
Sbjct: 227 EMAQLGTRLSVLGGDLTRDEIGSGYDLIWC--------------ASVLHFVPDLA----- 267

Query: 201 DGLSHYRTIADGVSRHLNKDGLCS---VEIG-----------------------YNQKVD 234
                 R I       L   G+      EI                        ++Q   
Sbjct: 268 ---QTLRKI----RAALAPGGVFVSIHAEIPLTAAQTATVLAYYLPLLMRGHHVWHQGEL 320

Query: 235 VVRIFESRKLFLVNAFK-DYG 254
              +F +     V  F+ D  
Sbjct: 321 PEALF-AAGFANVATFESDLF 340


>gi|332531630|ref|ZP_08407527.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
 gi|332038993|gb|EGI75422.1| cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
          Length = 410

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 72/195 (36%), Gaps = 38/195 (19%)

Query: 42  IVRSLKH------ESIHRILG-----WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFS 89
           IVR  KH      E+I          ++ + + R+  S   FE   ET        +   
Sbjct: 110 IVRRFKHTKKSDREAIQYHYDVSNAFYQTWLDPRMVYSCAYFENGDETLEEAQLKKIDHI 169

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L +++ R   R+LD+G G GA+ +   ++    + VGV +S    ++A       G+ E+
Sbjct: 170 LNKVQVRPGHRLLDIGCGWGALVIRAAQKY-GARCVGVTLSQNQFDLATERVKAAGLQEQ 228

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            +    D +  VEG FD I S                V  F+          GL +    
Sbjct: 229 IEIRLQD-YRDVEGQFDRITS----------------VGMFE--------HVGLDYLEAY 263

Query: 210 ADGVSRHLNKDGLCS 224
              + + L  DG   
Sbjct: 264 FAQIRKLLTDDGWVL 278


>gi|51246119|ref|YP_066003.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54]
 gi|50877156|emb|CAG36996.1| hypothetical protein DP2267 [Desulfotalea psychrophila LSv54]
          Length = 265

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 19/190 (10%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF--FKGVGVDIS 130
           + R      +D+ LA     +  R   RI+DLG+G+G + L +            G +  
Sbjct: 31  QHREGYRFSLDAVLAAHF--LPPRKQARIIDLGSGSGIIALIMAYRWRNLGVHITGFERQ 88

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIE-SVIVDCLGL 185
              + +AK N   NG  E     + D    ++ L    F+ +VSNPP+            
Sbjct: 89  QSLISLAKGNIELNGYDEICTIKEGDVRHILQHLPPESFEQLVSNPPFFPLGSGRPSQNR 148

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL- 244
           E      +++  GG              S+ L   G        N   D +      +L 
Sbjct: 149 EAYQARHQVA--GG------IEDFLYAASKVLANKGHAVFIYPANGLTDFLLAARKNRLE 200

Query: 245 -FLVNAFKDY 253
              +    DY
Sbjct: 201 PKRIQYIYDY 210


>gi|228476084|ref|ZP_04060792.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis
           SK119]
 gi|314936301|ref|ZP_07843648.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis
           subsp. hominis C80]
 gi|228269907|gb|EEK11387.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis
           SK119]
 gi|313654920|gb|EFS18665.1| ribosomal protein L11 methyltransferase [Staphylococcus hominis
           subsp. hominis C80]
          Length = 312

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 38/202 (18%)

Query: 57  WRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKR------------- 96
           W+++++      R T+      +    E EL ++     +    +               
Sbjct: 112 WKNYFHPFRASKRFTIVPSWEDYSKESEDELCIELDPGMAFGTGDHPTTSMCLKAIETYV 171

Query: 97  -DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + + 
Sbjct: 172 TPDSSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVGVAKENFRKNHCENDIEAIP 229

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG-- 212
            +        FDV+++N   I + I+D +  +  +     +L+   DG      I +   
Sbjct: 230 GNLLKEENEKFDVVIAN---ILAHIIDEMIEDAYN-----TLN--EDGYFITSGIIEEKH 279

Query: 213 --VSRHLNKDGLCSVEIGYNQK 232
             +  H+ + G   V I ++  
Sbjct: 280 EDILSHMKRVGFNIVSINHDNG 301


>gi|262192556|ref|ZP_06050706.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT
           5369-93]
 gi|262031601|gb|EEY50189.1| ribosomal protein L11 methyltransferase [Vibrio cholerae CT
           5369-93]
          Length = 295

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|323481620|gb|ADX81059.1| methyltransferase small domain protein [Enterococcus faecalis 62]
          Length = 244

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AKIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 QPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|315453508|ref|YP_004073778.1| methyltransferase small protein [Helicobacter felis ATCC 49179]
 gi|315132560|emb|CBY83188.1| Methyltransferase small protein [Helicobacter felis ATCC 49179]
          Length = 236

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 28/193 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL      +    ++  LV     F+ P I+KR   ++LD+G G G V L   +E    
Sbjct: 4   LRLYQPLGGYAYNSDSLFLV----HFARPFIKKR--AKLLDVGAGCGVVGLLCAREFANP 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               ++I       A+ N+     +     + +D+  +    +  I+SNPPY        
Sbjct: 58  -LDLIEIDPNLAFFAQKNSAH---APHARVICADFLHANLDTYHCIISNPPYYHLNSPQS 113

Query: 183 LGLEVRD-----FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
              ++       F P  +L                  R L   G   +    N    ++ 
Sbjct: 114 PNPQIARATNQSFLPLSAL-------------CAKAYRLLKPQGYFILCYHANLADSLLF 160

Query: 238 IFESRKLFLVNAF 250
             ++ KL  V   
Sbjct: 161 ALQNAKLNPVCVR 173


>gi|317063244|ref|ZP_07927729.1| ribosomal protein L11 methyltransferase [Fusobacterium ulcerans
           ATCC 49185]
 gi|313688920|gb|EFS25755.1| ribosomal protein L11 methyltransferase [Fusobacterium ulcerans
           ATCC 49185]
          Length = 312

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 32/185 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKRDVVRILDLGTGT 108
           +  +     E  PE + L+                  L   L     +    ++D+GTG+
Sbjct: 125 KFVVKPTWREYEPEEDELIIELDPGRAFGTGSHPTTSLCLKLMEENIKAGDSVIDVGTGS 184

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE-GLFD 166
           G + +A        +  G DI   A+E AK N   N +   +    + D  S VE   FD
Sbjct: 185 GILMIA-ADRLGASEIYGTDIDELAVESAKENLELNKIDGNKAKVFKGDLISVVENKKFD 243

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD----GL 222
           V+V+N   I + ++  L  ++             DGL  +  I +     L K+    G 
Sbjct: 244 VVVAN---ILADVLLILLNDISK-------VVKKDGLIIFSGIIEDKCEILKKEIEALGF 293

Query: 223 CSVEI 227
             +EI
Sbjct: 294 EILEI 298


>gi|257468996|ref|ZP_05633090.1| ribosomal protein L11 methyltransferase [Fusobacterium ulcerans
           ATCC 49185]
          Length = 310

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 32/185 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKRDVVRILDLGTGT 108
           +  +     E  PE + L+                  L   L     +    ++D+GTG+
Sbjct: 123 KFVVKPTWREYEPEEDELIIELDPGRAFGTGSHPTTSLCLKLMEENIKAGDSVIDVGTGS 182

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE-GLFD 166
           G + +A        +  G DI   A+E AK N   N +   +    + D  S VE   FD
Sbjct: 183 GILMIA-ADRLGASEIYGTDIDELAVESAKENLELNKIDGNKAKVFKGDLISVVENKKFD 241

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD----GL 222
           V+V+N   I + ++  L  ++             DGL  +  I +     L K+    G 
Sbjct: 242 VVVAN---ILADVLLILLNDISK-------VVKKDGLIIFSGIIEDKCEILKKEIEALGF 291

Query: 223 CSVEI 227
             +EI
Sbjct: 292 EILEI 296


>gi|78043572|ref|YP_360269.1| hypothetical protein CHY_1437 [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995687|gb|ABB14586.1| conserved hypothetical protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 390

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD    TGA  +         + +GVDIS +A+  A+ NAV NG  ++   ++++
Sbjct: 214 HGKKVLDCFCHTGAFSVY-AAGFGAKEVIGVDISSEAITRAQENAVLNGFQDKIFFIEAN 272

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +  L      FD+++ +PP   +   + L   +R                 Y+ I 
Sbjct: 273 CFDYLRELEKNRANFDIVILDPPAF-TKSKEALPGAIRG----------------YKEIN 315

Query: 211 DGVSRHLNKDGLCS 224
               + LN+ G+  
Sbjct: 316 LRALKLLNEGGILV 329


>gi|229579180|ref|YP_002837578.1| methylase [Sulfolobus islandicus Y.G.57.14]
 gi|228009894|gb|ACP45656.1| methylase [Sulfolobus islandicus Y.G.57.14]
          Length = 207

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N + N        L  D  S +    FDV + NP
Sbjct: 60  ---GGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|227830362|ref|YP_002832142.1| methylase [Sulfolobus islandicus L.S.2.15]
 gi|227456810|gb|ACP35497.1| methylase [Sulfolobus islandicus L.S.2.15]
          Length = 207

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N + N        L  D  S +    FDV + NP
Sbjct: 60  ---GGKVMFVDINPYATTSTLCSLKVNNLYNS-PNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|227529147|ref|ZP_03959196.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus
           vaginalis ATCC 49540]
 gi|227350991|gb|EEJ41282.1| 50S ribosomal protein L11P methyltransferase [Lactobacillus
           vaginalis ATCC 49540]
          Length = 320

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 37/170 (21%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T L++++        I  R    ++D+GTG+G + +A  K+    +    DI   A+ 
Sbjct: 163 PTTRLMIEAL------EIVARGGESMIDVGTGSGVLSIA-AKQLGVGQVAAYDIDEVAVR 215

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            AK N   N V+       +     +    D+IV+N                      ++
Sbjct: 216 SAKKNIDLNPVAADVKVGVNSLLDGIHTQVDLIVAN---------------------ILA 254

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                        +      +L   G   V  I  ++   V R  +    
Sbjct: 255 --------EIIVPLIPQAFENLKPGGRFLVSGIIKDKADLVERELKGHHF 296


>gi|260907228|ref|ZP_05915550.1| putative methyltransferase [Brevibacterium linens BL2]
          Length = 204

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 17/166 (10%)

Query: 59  DFYNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           D     +T+   S TF P       +D   A  L  +   +   ILDLG G G + L   
Sbjct: 22  DLAGREVTVETVSGTFSPTR-----LDLGTAVLLRHLPVPEPGDILDLGCGWGPIALDAA 76

Query: 117 KESPFF----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             +       +   +D++ ++LE    NA  +G+         +  + +   F  I SNP
Sbjct: 77  LSAKDAEVDVRVWALDVNSRSLETTAKNAQRHGLKTIRPVTADEIPAEL--QFSAIRSNP 134

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHL 217
           P    V  + L   +  + PR++  G  D L   + + AD + + L
Sbjct: 135 PI--RVGKEALHELLSTWLPRLAPGGRAD-LVVSKNLGADSLQKWL 177


>gi|258620656|ref|ZP_05715693.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573]
 gi|258587171|gb|EEW11883.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM573]
          Length = 295

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 46/194 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEDLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIF 239
            I   Q   V   +
Sbjct: 258 GILDTQAESVAEFY 271


>gi|257867839|ref|ZP_05647492.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257874167|ref|ZP_05653820.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257801922|gb|EEV30825.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257808331|gb|EEV37153.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 244

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 80/197 (40%), Gaps = 27/197 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS+ F    +  LL + A      R+ KR V  I+DL  G GAV L + K++  
Sbjct: 15  DIKIIQSSEVFSFSLDAVLLANYA------RVPKRGV--IVDLCAGNGAVGLFISKKT-T 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPYIES 177
                +++  +  ++A+ +   N + ++      D    F  +     D++V NPPY ++
Sbjct: 66  AHIYQIELQERLADMAQRSIELNDLQDQLTVYPLDLKNLFQKIKPDSVDLLVCNPPYFKN 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           V            +   +   +LD           +    S+ L  +G  ++    ++ +
Sbjct: 126 VPTAIKNPNPYLAIARHEITTTLD----------EVIQTASKALKMNGRFAMVHRPDRFL 175

Query: 234 DVVRIFESRKLFLVNAF 250
           D++    + ++      
Sbjct: 176 DILDHMRAHRIAPKRVR 192


>gi|91206171|ref|YP_538526.1| ribosomal protein L11 methylase [Rickettsia bellii RML369-C]
 gi|157826527|ref|YP_001495591.1| ribosomal protein L11 methylase [Rickettsia bellii OSU 85-389]
 gi|91069715|gb|ABE05437.1| Ribosomal protein L11 methylase [Rickettsia bellii RML369-C]
 gi|157801831|gb|ABV78554.1| Ribosomal protein L11 methylase [Rickettsia bellii OSU 85-389]
          Length = 305

 Score = 65.9 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 48/195 (24%)

Query: 74  PRPETELLVDS-------------ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           P+ +T +L+++                 +L  ++     +ILD+GTG+G +     K   
Sbjct: 127 PKDKTLILIEASRAFGTGTHETTSGCIEALEYLKAIKANKILDIGTGSGILSFIAEKLWN 186

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWFSS-VEGLFDVIVSNPPYIES 177
             + +  DI   ++EIAK NA  N  + +F  +T ++    S     FD+++SN   +  
Sbjct: 187 EAEILACDIDNASVEIAKENASFNNSNIKFYQNTSENILLDSYYNDKFDLVISNILALPL 246

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY--NQKVDV 235
           + +                                +S  +NK+G   +  G+  NQ  DV
Sbjct: 247 IELST-----------------------------QISNLMNKNGYLVL-SGFLDNQLEDV 276

Query: 236 VRIFESRKLFLVNAF 250
              +E     +    
Sbjct: 277 RNAYEKIGFEVKEII 291


>gi|330830793|ref|YP_004393745.1| ribosomal RNA large subunit methyltransferase G [Aeromonas veronii
           B565]
 gi|328805929|gb|AEB51128.1| Ribosomal RNA large subunit methyltransferase G [Aeromonas veronii
           B565]
          Length = 377

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 58/166 (34%), Gaps = 28/166 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  +      +++DLG G G + L+LL +    +   +D S  A+  A+ N  
Sbjct: 217 DIGARFMLDNLPIHSARKVIDLGCGNGVLGLSLLAKDSEVEVTFIDESYMAVASAQLNVE 276

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N      R   + ++    V  G  D I+ NPP+ +   +             I+    
Sbjct: 277 HNLPDALLRAHFMVNNCLDGVAVGSADRILCNPPFHQLQAITD----------HIAW--- 323

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESR 242
                    +     R L + G   + +G         + R+F + 
Sbjct: 324 --------QMFSDAHRVLPQGGELWI-VGNRHLDYHNKLKRLFANA 360


>gi|300813552|ref|ZP_07093883.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300512300|gb|EFK39469.1| ribosomal protein L11 methyltransferase [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 301

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + I D+G G+G + +A   +        VDI  K ++ +K NA  N V ++    + 
Sbjct: 163 KKDMSIFDIGCGSGILGIA-AIKLGGKSATLVDIDDKCIKASKENAKLNEVYDKVKVKKG 221

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +    +EG  D+IVSN   I  +IVD + 
Sbjct: 222 NLLDVIEGKCDIIVSN--IIAEIIVDEIS 248


>gi|283954225|ref|ZP_06371749.1| hypothetical protein C414_000090016 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794243|gb|EFC32988.1| hypothetical protein C414_000090016 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 233

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 20/165 (12%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFVLKQGIKGA-------VFDVGAGCGIIGILLKKNITNL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-- 180
               +DI  + +E+ + N   N +         + F SV+  FD IV NPP+        
Sbjct: 58  SLSLIDIQKENIELIEKNLKANQIQADIFHGDFNEFQSVQ-KFDFIVCNPPFYRQGAYKS 116

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +     +  F   + LD                +  L  +G    
Sbjct: 117 EDWHKNMSKFQEFLPLDS----------FLTKANSILKPNGTLYF 151


>gi|187778462|ref|ZP_02994935.1| hypothetical protein CLOSPO_02056 [Clostridium sporogenes ATCC
           15579]
 gi|187772087|gb|EDU35889.1| hypothetical protein CLOSPO_02056 [Clostridium sporogenes ATCC
           15579]
          Length = 312

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 18/137 (13%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 175 KEDKTVFDIGCGSGILSIASAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIA---- 210
           +    VEG  +++V+N   I + ++  L   V+ F +         DG      I     
Sbjct: 233 NLMEVVEGRANIVVAN---IIADVIIFLTEGVKAFIE--------KDGYFIASGIINSRK 281

Query: 211 DGVSRHLNKDGLCSVEI 227
           + V + L + G    E+
Sbjct: 282 EDVIKKLEETGFVIEEV 298


>gi|56697367|ref|YP_167735.1| hypothetical protein SPO2520 [Ruegeria pomeroyi DSS-3]
 gi|56679104|gb|AAV95770.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 403

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +          R+LD+ +  G   LA+L        + VD S  AL +A
Sbjct: 210 TGLFYDQRPNHAFAARLAGQGTRVLDVFSHVGGFALAMLAGGAGS-ALAVDGSAPALALA 268

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +  A+ +G++ RF+T Q D F  +         FDV++ +PP                  
Sbjct: 269 EQGALASGLAGRFETRQGDAFDVLTALAEEGETFDVVICDPPAFAPS------------- 315

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +LD    GL  Y  +A   +  +   G   +
Sbjct: 316 -KQALDA---GLRAYERVARLAAALVRPGGYLGL 345


>gi|15889356|ref|NP_355037.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens
           str. C58]
 gi|38605383|sp|Q8UDP9|PRMA_AGRT5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|15157200|gb|AAK87822.1| ribosomal protein L11 methyltransferase [Agrobacterium tumefaciens
           str. C58]
          Length = 292

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 59/174 (33%), Gaps = 43/174 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ K  P    +  DI   A+++AK N   NG
Sbjct: 140 LEMIEDVLRARKVRNALDLGTGSGVLAIAVRKMRPIP-VLATDIDPIAVKVAKENVRLNG 198

Query: 146 VSERFDT-----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +             SD F    G FD+I++N                             
Sbjct: 199 IVSGMALETAPGFHSDAFRK-HGPFDLIIAN----------------------------- 228

Query: 201 DGLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                 R +     +   HL   G   +  I  +Q+  V+  +   KL  +   
Sbjct: 229 ---ILARPLIKMAPQLVTHLAPGGTVILSGILASQRWKVLSAYNGAKLSHIRTI 279


>gi|156548692|ref|XP_001602591.1| PREDICTED: similar to prip interacting protein. pimt [Nasonia
           vitripennis]
          Length = 577

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 11/154 (7%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D   G G   ++        +   +DI  K +E+A+ NA   GV +R + +  D+F   
Sbjct: 424 IDAFCGAGGNSISFA--FTCERVYAIDIDPKKIEMARHNARIYGVEDRIEFIIGDFFCLA 481

Query: 162 EGLF-DVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           E LF DV+  +PP+     +     ++ +  DP     GGI      + I+D ++  L K
Sbjct: 482 ERLFGDVVFLSPPWGGPSYIQDKSFDIENIMDPH----GGIKLFEVSKRISDNIAYFLPK 537

Query: 220 D---GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +      ++  G   K+++ + F   +L  V A+
Sbjct: 538 NINTLQLAMTAGPGSKIELEQNFLDSQLIAVTAY 571


>gi|119623401|gb|EAX02996.1| HpaII tiny fragments locus 9C, isoform CRA_b [Homo sapiens]
 gi|119623402|gb|EAX02997.1| HpaII tiny fragments locus 9C, isoform CRA_b [Homo sapiens]
          Length = 562

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-I 101
           +   +  + G R    D   +   +S   F    +        L   +    + D    +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSMV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 437 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 494

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 495 TLVSRLASQHLVAILDPP 512


>gi|332304470|ref|YP_004432321.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332171799|gb|AEE21053.1| methyltransferase small [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 343

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 62/179 (34%), Gaps = 35/179 (19%)

Query: 54  ILGWR---DFY--NVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           I  W+   ++   ++   +      F         +D+     L  I++    RILD   
Sbjct: 158 ITKWQDVSEYQVSDITFKVCSLPGVFSHGE-----LDTGTQLLLDNIDRVVSGRILDFAC 212

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G +      ++   + V  D+S  A+  ++ +A  NGV  +   + S+   ++ G F 
Sbjct: 213 GAGIIGCFAGLKNAQAQVVMSDVSALAIYCSQKSAELNGVKAQV--IPSNGLRALTGKFA 270

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +NPP+   +  D                      S   +    +  HL   G   +
Sbjct: 271 QVFTNPPFHTGIKTD---------------------YSVTESFMQQLKNHLQDRGSLIL 308


>gi|322828893|gb|EFZ32513.1| hypothetical protein TCSYLVIO_1138 [Trypanosoma cruzi]
          Length = 568

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R  LS  +F     + +  +  L  +           +LDL  GTG + L L K    
Sbjct: 367 GLRFELSPTSFFQVNTSGM--ELLLCETAKVAALGPKTTLLDLCCGTGVIGLTLAKHVK- 423

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV--EGLFDVI-VSNP 172
            + +G+++   A+  A+ NA  N ++       R + L  D  +S+  E   D++ + +P
Sbjct: 424 -RVIGIELVESAVSDARQNAKRNDIANATFCSGRVEHLLPDIINSLPEEDKTDIVAILDP 482

Query: 173 P 173
           P
Sbjct: 483 P 483


>gi|315585890|gb|ADU40271.1| methyltransferase [Helicobacter pylori 35A]
          Length = 238

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    +T+    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNTYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA     ++ F++   D+   +  L+DVIV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFCSQKNAFKFPNAQVFESDFLDFNPPI--LYDVIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|254465429|ref|ZP_05078840.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I]
 gi|206686337|gb|EDZ46819.1| SAM-dependent methyltransferase [Rhodobacterales bacterium Y4I]
          Length = 404

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +          R+LD+ +  G   LA+L      +   VD S  ALE+A
Sbjct: 210 TGLFFDQRENHAFAARLTAPGARVLDVFSHVGGFGLAMLAGGAG-QATCVDGSAAALELA 268

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
              A   G  ++F   Q D F  +  L      FDV++ +PP                  
Sbjct: 269 AQGAEAGGFKDKFTARQGDAFDVLTALGEEGESFDVVICDPPAFAPS------------- 315

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +L+    GL  Y  +A   +  +   G   +
Sbjct: 316 -KQALEA---GLRAYERVAKLAAPLVKPGGYLGL 345


>gi|71415097|ref|XP_809627.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70874038|gb|EAN87776.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 568

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R  LS  +F     + +  +  L  +           +LDL  GTG + L L K    
Sbjct: 367 GLRFELSPTSFFQVNTSGM--ELLLCETAKVAALGPKTTLLDLCCGTGVIGLTLAKHVK- 423

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV--EGLFDVI-VSNP 172
            + +G+++   A+  A+ NA  N ++       R + L  D  +S+  E   D++ + +P
Sbjct: 424 -RVIGIELVESAVSDARQNAKRNDIANVTFCSGRVEHLLPDIINSLPEEDKTDIVAILDP 482

Query: 173 P 173
           P
Sbjct: 483 P 483


>gi|323476892|gb|ADX82130.1| hypothetical protein SiH_0775 [Sulfolobus islandicus HVE10/4]
          Length = 319

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 31/176 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF-----KGVGVDISCKALEIAKSNAVTNGVSE 148
                 R+LD G G G    A++K          + VGV+I     ++A+          
Sbjct: 8   NPSPNARVLDAGCGEGVFIEAIIKWYSERGIELPEIVGVEIDH---KLAERARKKFNNIS 64

Query: 149 RFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRD-----FDPRISLDGG 199
           +   ++ D+       + G FD I+SNPPYI     + +  E R      F+   +  G 
Sbjct: 65  KVKIIEDDFLTVKEEKLGGEFDYIISNPPYIS---YEKISPEKRKLYKSIFE---AAVGR 118

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYN-----QKVDVVRIFESRKLFLVNAF 250
            D    Y    +     L   G                  + ++    ++  +   
Sbjct: 119 FD---IYMLFFERALNLLKPGGRMVFLTPEKYLYVISAGKLRKLLSRYRVVEIELI 171


>gi|253702090|ref|YP_003023279.1| methyltransferase small [Geobacter sp. M21]
 gi|251776940|gb|ACT19521.1| methyltransferase small [Geobacter sp. M21]
          Length = 266

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 12/133 (9%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y +R+      +    +  LL D A          R   R  DLGTG G + L L +   
Sbjct: 32  YGLRIIQPRHGYRFSVDPLLLADFA--------GVRTGERCADLGTGCGVIALLLARLGE 83

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                 V+       IA  N + NG+S R + ++ D  S         FD++VSNPPY  
Sbjct: 84  NSSVAAVEFQQVMARIAARNVILNGLSGRVEVVEEDVVSVKSRFPVDSFDLVVSNPPYRR 143

Query: 177 SVIVDCLGLEVRD 189
                      RD
Sbjct: 144 PGTGKVSPRAGRD 156


>gi|170780505|ref|YP_001708837.1| hypothetical protein CMS_0047 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169155073|emb|CAQ00172.1| probable conserved transmembrane protein (hypothetical protein)
           [Clavibacter michiganensis subsp. sepedonicus]
          Length = 539

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
            +  L V  A A     +    V   LDLGTG G   L   + +   + V  DIS +AL 
Sbjct: 149 EDHVLGVGGASATLSGLMISAPVATALDLGTGCGIQALHASRHAD--RVVATDISARALA 206

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A  NA  NG++   +      F  V G  FD IVSNPP++ +   + +      ++ R 
Sbjct: 207 FAALNAALNGIT-TIELRLGSLFEPVAGERFDHIVSNPPFVITPRAEGVPA----YEYR- 260

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D G+ G +    +   ++ HL   G+  +
Sbjct: 261 --DAGLVGDALVEGVVADLADHLTPGGIAQL 289


>gi|42779113|ref|NP_976360.1| hypothetical protein BCE_0032 [Bacillus cereus ATCC 10987]
 gi|47570438|ref|ZP_00241074.1| methyltransferase [Bacillus cereus G9241]
 gi|206977967|ref|ZP_03238854.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217957610|ref|YP_002336152.1| hypothetical protein BCAH187_A0043 [Bacillus cereus AH187]
 gi|222093804|ref|YP_002527853.1| methyltransferase [Bacillus cereus Q1]
 gi|228983291|ref|ZP_04143505.1| hypothetical protein bthur0001_230 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229136881|ref|ZP_04265509.1| hypothetical protein bcere0013_260 [Bacillus cereus BDRD-ST26]
 gi|229153814|ref|ZP_04281945.1| hypothetical protein bcere0010_220 [Bacillus cereus ATCC 4342]
 gi|42735028|gb|AAS38968.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|47552896|gb|EAL11311.1| methyltransferase [Bacillus cereus G9241]
 gi|206743873|gb|EDZ55293.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217065018|gb|ACJ79268.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|221237851|gb|ACM10561.1| Methyltransferase [Bacillus cereus Q1]
 gi|228629618|gb|EEK86314.1| hypothetical protein bcere0010_220 [Bacillus cereus ATCC 4342]
 gi|228646546|gb|EEL02752.1| hypothetical protein bcere0013_260 [Bacillus cereus BDRD-ST26]
 gi|228776405|gb|EEM24757.1| hypothetical protein bthur0001_230 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|324324024|gb|ADY19284.1| methyltransferase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 246

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DLKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|27381699|ref|NP_773228.1| ribosomal protein L11 methyltransferase [Bradyrhizobium japonicum
           USDA 110]
 gi|38605264|sp|Q89FW1|PRMA_BRAJA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|27354868|dbj|BAC51853.1| ribosomal protein L11 methyltransferase [Bradyrhizobium japonicum
           USDA 110]
          Length = 295

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 40/176 (22%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L  S P         +LDLGTGTG + +A  K       +  DI   ++ +A  
Sbjct: 143 LLLDHVLKSSRPS-------NVLDLGTGTGVLAIAAAKALHRA-VLASDIDPPSVRVAAE 194

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           N   N V      +++  F++ +    G FD++++N           L   +R     ++
Sbjct: 195 NGRLNEVGHHVRVIRATGFAAPDFARAGPFDLVLAN----------ILANPLRHLASPMA 244

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                      R +A G    L+  GL       +Q   V+  + +R L  +   +
Sbjct: 245 -----------RHLAPGARVILS--GLL-----THQAPAVIAAYRARGLVPLRHLR 282


>gi|254682339|ref|ZP_05146200.1| hypothetical protein BantC_00608 [Bacillus anthracis str.
           CNEVA-9066]
          Length = 246

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +        ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PVTSE-----KNMNEHLAIARHEI-MCTLEEVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|84684942|ref|ZP_01012842.1| hypothetical protein 1099457000245_RB2654_03499 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667277|gb|EAQ13747.1| hypothetical protein RB2654_03499 [Rhodobacterales bacterium
           HTCC2654]
          Length = 402

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 55/135 (40%), Gaps = 24/135 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  R+LD+ +  G   LA    +     + VD S  AL++A   A   GV++RFDT Q D
Sbjct: 226 NGARVLDVFSHVGGFSLA-ALANGATTALAVDGSQPALDLATQGAEATGVADRFDTRQGD 284

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +  L      FD+++ +PP                   + +LD    GL  Y  IA
Sbjct: 285 AFDVLTSLGEAGEVFDMVICDPPAFAPN--------------KQALDA---GLRAYERIA 327

Query: 211 DGVSRHLNKDGLCSV 225
              +  +   G   +
Sbjct: 328 RLAAPLVGPGGYLGL 342


>gi|313672691|ref|YP_004050802.1| hypothetical protein Calni_0728 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939447|gb|ADR18639.1| protein of unknown function Met10 [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 245

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 10/156 (6%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F+P+       DS L      ++     +++++G GTG + + L K     K   V+I 
Sbjct: 17  IFQPKNGFRFTTDSILLAGF--VKDTTYKKVIEIGAGTGIISVLLAKFFKIEKIYAVEIQ 74

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            ++ E+       N + E    +  D          D+I+SNPPY +         E + 
Sbjct: 75  KESYELLCKTIEVNNLQEIIIPVNIDVKEFKPRENVDMIISNPPYRKGDTGYTSNSEQK- 133

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +++             I      +L   G   +
Sbjct: 134 ---KLARFTFS---LTIEDIFKFSKSYLKTGGYLYL 163


>gi|307596017|ref|YP_003902334.1| precorrin-6Y C5,15-methyltransferase subunit CbiT [Vulcanisaeta
           distributa DSM 14429]
 gi|307551218|gb|ADN51283.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Vulcanisaeta distributa DSM 14429]
          Length = 219

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 27/168 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A  + ++  R+  R+LD+G+GTG+V +     +       +D    A+E+ + NA+
Sbjct: 29  EEVRALVISKLRLREDSRVLDIGSGTGSVTVEAALMARRGLVYAIDSDENAVELTRRNAI 88

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             GVS+R   +  +   ++                     +  EV       +  GG  G
Sbjct: 89  RFGVSDRVIVIHGEAPEALN-------------------QVPGEV-----DAAFVGGSGG 124

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNA 249
               R I  GV   L+  G   +  I        +          V  
Sbjct: 125 --KLRDIIVGVRGKLSVGGRLVIDAITLENASLALATMAELGFVNVEV 170


>gi|269796895|ref|YP_003316350.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
 gi|269099080|gb|ACZ23516.1| 16S rRNA m(2)G 1207 methyltransferase [Sanguibacter keddieii DSM
           10542]
          Length = 394

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +    +DLG GTG +   L +  P  + V  D S  A+    + A  NGV +R   L+ 
Sbjct: 246 PEARDAVDLGCGTGVLATVLARSRPGLRVVASDQSAAAVASTLATAGANGVGDRVTGLRD 305

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDC 182
           D  S++ +   D++V NPP+ E   ++ 
Sbjct: 306 DALSTLPDASADLVVCNPPFHEGTTLET 333


>gi|126664959|ref|ZP_01735942.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17]
 gi|126630329|gb|EBA00944.1| nucleotide methyltransferase, putative [Marinobacter sp. ELB17]
          Length = 419

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 21/125 (16%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G G + LA L  +   +    D+S +A+  A +NA        F    +D  ++
Sbjct: 281 VLDLACGNGVLGLAALAANSHLELTFSDVSSQAVISAATNAAREFPQSAFSFRHADSIAA 340

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G FD+I+ NPP+                +      GG+ G      +     RHL   
Sbjct: 341 DGGEFDLILLNPPF---------------HE------GGVVGDHIALALFAAARRHLRPG 379

Query: 221 GLCSV 225
           G   +
Sbjct: 380 GRLLL 384


>gi|253581983|ref|ZP_04859207.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC
           27725]
 gi|251836332|gb|EES64869.1| ribosomal protein L11 methyltransferase [Fusobacterium varium ATCC
           27725]
          Length = 312

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 69/185 (37%), Gaps = 32/185 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKRDVVRILDLGTGT 108
           +  +     E  PE + L+                  L   L     ++   ++D+GTG+
Sbjct: 125 KFVVKPTWREYEPEDDELIIELDPGRAFGTGSHPTTSLCLKLMEENIKEGDSVIDVGTGS 184

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-GLFD 166
           G + +A        +  G DI   A+E AK N   N + E      + D  S VE   FD
Sbjct: 185 GILMIA-ADRLGASEIYGTDIDELAVESAKENLELNKIDENKAKVFKGDLISVVENKKFD 243

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD----GL 222
           V+V+N   I + ++  L  ++             DGL  +  I +     L K+    G 
Sbjct: 244 VVVAN---ILADVLLILLNDISK-------VVKKDGLIIFSGIIEDKCELLKKEVEALGF 293

Query: 223 CSVEI 227
             +E+
Sbjct: 294 NILEV 298


>gi|149007551|ref|ZP_01831186.1| hypothetical protein CGSSp18BS74_11029 [Streptococcus pneumoniae
           SP18-BS74]
 gi|147760910|gb|EDK67880.1| hypothetical protein CGSSp18BS74_11029 [Streptococcus pneumoniae
           SP18-BS74]
          Length = 198

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 19/150 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FS 159
           D   G GAV L         + + V+I  +  ++A+ +   NG+ E+   +  D     +
Sbjct: 2   DFCAGNGAVGL-FASTRTQAQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPA 60

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVS 214
            ++G   D+I+ NPPY +      L       +   +   +L            I     
Sbjct: 61  HIQGSKVDMILCNPPYFKVNPYSNLNESEHYLLARHEITTNL----------EEICRSAQ 110

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             L  +G  ++    ++ +D++   +   L
Sbjct: 111 SILKSNGRLAMVHRPDRLLDILDTLKRHNL 140


>gi|94988827|ref|YP_596928.1| methyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94992714|ref|YP_600813.1| methyltransferase [Streptococcus pyogenes MGAS2096]
 gi|94542335|gb|ABF32384.1| methyltransferase [Streptococcus pyogenes MGAS9429]
 gi|94546222|gb|ABF36269.1| Methyltransferase [Streptococcus pyogenes MGAS2096]
          Length = 284

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           + V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIIEVELQERLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|198429165|ref|XP_002119598.1| PREDICTED: similar to N-6 adenine-specific DNA methyltransferase 1
           [Ciona intestinalis]
          Length = 232

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 10/180 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GV 127
            D +EP  +T LL+D AL      +E       +++G+G+G V   + K           
Sbjct: 15  KDVYEPAEDTFLLLD-ALEKEKSFLESVRPTITVEVGSGSGVVSAFVSKILGNSALYFCT 73

Query: 128 DISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           D + +A   +      N  +       L S     ++   D+++ NPPY+ +        
Sbjct: 74  DRNHRAALCSNETFKVNKANVNVVVTDLVSGLLPKLKNSVDLLIFNPPYVVTP-----SD 128

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           E++      S  GG+ G          V   L+  G+  +  I  N+  ++  +F +   
Sbjct: 129 EIKGSGITASWAGGMHGREVMDKFFQLVPTLLSDKGVLYLVVIKENKPDEIKALFSNMGF 188


>gi|299131911|ref|ZP_07025106.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2]
 gi|298592048|gb|EFI52248.1| ribosomal L11 methyltransferase [Afipia sp. 1NLS2]
          Length = 301

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           +L+D  L  S PR       R+LDLGTGTG + +A  K       +  DI  +++ +AK 
Sbjct: 149 MLLDRVLCQSTPR-------RVLDLGTGTGVLAIAAAKAL-HRSILASDIDPRSVVVAKE 200

Query: 140 NAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
           NAV NGV    + + +  F S      G FD++++N
Sbjct: 201 NAVLNGVGRDVEAIHAIGFGSPRFAETGPFDLVLAN 236


>gi|118475806|ref|YP_892957.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
 gi|196047362|ref|ZP_03114575.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225862086|ref|YP_002747464.1| hypothetical protein BCA_0043 [Bacillus cereus 03BB102]
 gi|229182429|ref|ZP_04309681.1| hypothetical protein bcere0004_230 [Bacillus cereus BGSC 6E1]
 gi|118415031|gb|ABK83450.1| methyltransferase [Bacillus thuringiensis str. Al Hakam]
 gi|196021764|gb|EDX60458.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225787036|gb|ACO27253.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|228601009|gb|EEK58577.1| hypothetical protein bcere0004_230 [Bacillus cereus BGSC 6E1]
          Length = 246

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DLKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVKYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|315427093|dbj|BAJ48709.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
 gi|315427124|dbj|BAJ48739.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 184

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 21/154 (13%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + PR +T L +D          +   V  + ++G GTG V  AL ++S    G+ +D   
Sbjct: 5   YTPREDTFLTIDCV-------AKTSHVQMVAEVGCGTGEVLKALAEKSDDIIGIDID--P 55

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +AL IA        +  R   L +          D++V+NPPY+          E    D
Sbjct: 56  EALRIAAE--KLKDLKPRLHLLNASLLPLRPRSLDMVVANPPYLPD--------EPGFHD 105

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P  ++ GG  G+     I +  SR L    +  +
Sbjct: 106 P--TIHGGPRGVELAEQIMEHSSRALRNQAILVL 137


>gi|75906230|ref|YP_320526.1| methyltransferase [Anabaena variabilis ATCC 29413]
 gi|75699955|gb|ABA19631.1| probable methyltransferase [Anabaena variabilis ATCC 29413]
          Length = 267

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 65/169 (38%), Gaps = 39/169 (23%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                     PR +  L     ++  LP        RILDLG GTG + L +L+  P  +
Sbjct: 43  DFDTGIRQLLPRYDEIL---EVISRCLPLTSH----RILDLGCGTGELSLKILQRCPNAQ 95

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--------SVEGLFDVIVSNPPYI 175
            + +D S + LE A+    ++G  ER+  LQ+D+          ++   FD  VS     
Sbjct: 96  VIALDYSPRMLEFAQHKIASSGYKERWTGLQADFGDWAINPETLNIGNEFDACVS----- 150

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            S+ +  L  +++              L  ++ IA      L  +G   
Sbjct: 151 -SLAIHHLYDDMK--------------LRLFQRIAAS----LTPNGCFW 180


>gi|153814681|ref|ZP_01967349.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756]
 gi|145848175|gb|EDK25093.1| hypothetical protein RUMTOR_00896 [Ruminococcus torques ATCC 27756]
          Length = 458

 Score = 65.9 bits (160), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  ++  +F  +P T+   +         I     + + DL +GTG
Sbjct: 268 LYGQDFFYEKLLGLQFKITPFSF-FQPNTK-GAEVLYETVREYIGDIHDLTVFDLFSGTG 325

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLF 165
            +  AL    P  K  +GV+I  +A+E AK NA  NG+S   + +  D F     ++   
Sbjct: 326 TISQALA---PVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFEVLDDIKEKP 381

Query: 166 DVIVSNPP 173
           DVI+ +PP
Sbjct: 382 DVIILDPP 389


>gi|311694664|gb|ADP97537.1| cyclopropane-fatty-acyl-phospholipid synthase [marine bacterium
           HP15]
          Length = 424

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 40/244 (16%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVR 100
           K+ S H  LG   +  F +  +  SS  + P  E+  L ++A   L     +++ +   +
Sbjct: 143 KNISAHYDLGNDLFETFLDPTMMYSSAIY-PSAESS-LEEAAVHKLDTICRKLDLQPGDK 200

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++++GTG G   +   K           IS + LE+AK      G+ ++   L  D +  
Sbjct: 201 VIEIGTGWGGFAIHAAKHY-GCHVTTTTISREQLELAKERVQKEGLEDQITLLFDD-YRD 258

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTI--------- 209
           +EG FD +VS        +++ +G +  D  F    +L    DGL+  + I         
Sbjct: 259 LEGQFDKLVS------IEMIEAVGPQFLDSYFSQINALL-KPDGLALVQAINMPEQRYQR 311

Query: 210 ----ADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                D + R +            +E    +   V+   E           D+   DR  
Sbjct: 312 ALKNVDFIQRFIFPGSFIPSFGAILESVRKESKLVLTHAEDTGFHYARTLHDWC--DRF- 368

Query: 261 LFCR 264
           +  R
Sbjct: 369 MAQR 372


>gi|225387762|ref|ZP_03757526.1| hypothetical protein CLOSTASPAR_01532 [Clostridium asparagiforme
           DSM 15981]
 gi|225046137|gb|EEG56383.1| hypothetical protein CLOSTASPAR_01532 [Clostridium asparagiforme
           DSM 15981]
          Length = 318

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 92/275 (33%), Gaps = 75/275 (27%)

Query: 16  GLSSHQVIVDPDSVLDD---------RQRFFLTNAIVRSLKH---ESIHRILGWRDFYNV 63
           G++     VD D  +++          +    T+   R++     E    I  W+ ++  
Sbjct: 59  GVAKVSFYVDDDRDIEELMKQVEEGLDELAVFTDLGQRTISASETEDKDWINNWKQYFK- 117

Query: 64  RLTLSSDTFEPRPET-------ELLVD--------------SALAFSLPRIEKRDVVRIL 102
             T+     +P  ET       +LLV               + L     +       ++L
Sbjct: 118 PFTVDDILIKPTWETIPEEHRDKLLVQIDPGTAFGTGMHETTQLCIRQLKKAVDSGTKLL 177

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV 161
           D+GTG+G + +  LK     +  G D+   A+     N   NG+S ERF  LQ +  +  
Sbjct: 178 DVGTGSGILGITALKLGAK-EVWGTDLDENAITAVGENLEANGISGERFHVLQGNILNDP 236

Query: 162 E-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                   G +DV+V+N                      ++             + D + 
Sbjct: 237 SVQEWAGFGCYDVVVAN---------------------ILA--------DVIILLVDEIP 267

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLV 247
            HL + GL      I   ++  V+  F     F V
Sbjct: 268 VHLKQGGLFITSGIINMKEQ-AVLDAFAKNPAFEV 301


>gi|329889421|ref|ZP_08267764.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844722|gb|EGF94286.1| methyltransferase small domain protein [Brevundimonas diminuta ATCC
           11568]
          Length = 242

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 15/176 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E R   R+++ G G GAV + +    P     G++    A  +A+ NA  N    R   
Sbjct: 33  VEARPGERLIEAGCGAGAVLMQIAARRPGVLLTGLERDAAAAALARQNAELNNAEARTTI 92

Query: 153 LQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           ++ D            FD  VSNPP+ +         E +      +     DGL+ +  
Sbjct: 93  VEGDVARGFRALDLSPFDWAVSNPPFFDDPGALRAPAEGK----LGAWMA-DDGLTAWAG 147

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE-SRKLFLVNAFKDYGGND--RVLL 261
                 R   + G   +    ++  D++ +       F V     Y      RVL+
Sbjct: 148 FLLKAVR---EGGRIVIIHRADRLADILSLLAPKAGSFAVRPIHPYADQPAKRVLV 200


>gi|315179835|gb|ADT86749.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio furnissii
           NCTC 11218]
          Length = 414

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 30/191 (15%)

Query: 39  TNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIE 94
            N+IVR+ ++   H  LG   ++ F + R+  SS  +    ++        +     +++
Sbjct: 134 RNSIVRAKQNIEAHYDLGNDLYQTFLDERMLYSSALYLNTRDSLEQAQIQKMDRLCQQLQ 193

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +  R++++GTG GA+ + + +           IS +    A++     G+  R   L+
Sbjct: 194 LSEHDRVIEIGTGWGAMAIYMAQHY-GCHVTTTTISEEQYAYAQAEVARLGLEARITLLK 252

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D +  ++G FD +VS         ++ +    + + P                      
Sbjct: 253 QD-YRVLDGQFDKLVS---------IEMIEAVGKAYLPSY---------------IAKCQ 287

Query: 215 RHLNKDGLCSV 225
             L   GL ++
Sbjct: 288 SLLKPGGLMAI 298


>gi|139473562|ref|YP_001128278.1| hypothetical protein SpyM50709 [Streptococcus pyogenes str.
           Manfredo]
 gi|134271809|emb|CAM30042.1| conserved hypothetical protein [Streptococcus pyogenes str.
           Manfredo]
          Length = 258

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 90  QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 150 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 195


>gi|83593245|ref|YP_426997.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           rubrum ATCC 11170]
 gi|83576159|gb|ABC22710.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           rubrum ATCC 11170]
          Length = 420

 Score = 65.5 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+G G G + L L +     +  G+ +S +   +A+      G+ +R   L  
Sbjct: 171 RPGQHVLDIGCGWGGLALHLARH-HDVRVTGITLSQEQAALARERVRAAGLQDRVTILLK 229

Query: 156 DWFSSVEGLFDVIVS 170
           D +  ++G FD +VS
Sbjct: 230 D-YRDLDGRFDRVVS 243


>gi|332701731|ref|ZP_08421819.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay]
 gi|332551880|gb|EGJ48924.1| methyltransferase small [Desulfovibrio africanus str. Walvis Bay]
          Length = 320

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 16/110 (14%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A A  L     +   R+LDLGTG G V L  L  +     VG++++ K+   A  NA   
Sbjct: 23  ADALLLACFLPQGPGRLLDLGTGCGPVALGWLLRNSEGSAVGLELNPKSAACAWENAARL 82

Query: 145 GVSERFDTLQSDWFSSVEG----------------LFDVIVSNPPYIESV 178
           G+  R D  + D     +G                 FD++  NPPY    
Sbjct: 83  GLETRLDVREGDVRDVRKGGNKLAASGGSARLEPESFDLVACNPPYHAPG 132


>gi|312282383|dbj|BAJ34057.1| unnamed protein product [Thellungiella halophila]
          Length = 1069

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 90/268 (33%), Gaps = 50/268 (18%)

Query: 22  VIVDPDSVLD-DRQRFFLTNAIVRSLKHES-------------IHRILGWRDFYNVRLTL 67
           ++   +  +     R FL++   R    ES             + +  G++    + + +
Sbjct: 27  LLERLEDPITRSDARIFLSDLYKRIGSSESSLQTYHFHIQDIFLDQYQGFQTRKKLTMMV 86

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               F P   +    +  L      I K     I +LG G G + +A+  +    K  G+
Sbjct: 87  IPSIFIPEDWSFTFYE-GLNRHPDTIFKDKT--IAELGCGNGWISIAIAAKWLPSKVYGL 143

Query: 128 DISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWFSSVEG---LFDVIV 169
           DI+ +A++I+  N   N +                +R +  +SD  S  +      + IV
Sbjct: 144 DINPRAVKISWINLYLNALDDNGQPVYDDEKKTLLDRVEFYESDLLSYCKDNKIQLERIV 203

Query: 170 SNPPYI---ESVIVDCLGLEVRDFD------PRISLDGGID---GLSHYRTIADGVSRHL 217
              P I       +  +  E    +         +L G ++   GL       +     +
Sbjct: 204 GCIPQILNPNPEAMSKMIEENASEEFLHSLSNYCALQGFVEDQFGLGLIARAVEEGISVI 263

Query: 218 NKDGLCSVEIG--YNQKVDVVRIFESRK 243
              G+    +G    Q V   R+FE R 
Sbjct: 264 KPAGIMIFNMGGRPGQGV-CRRLFERRG 290


>gi|315502631|ref|YP_004081518.1| methyltransferase small [Micromonospora sp. L5]
 gi|315409250|gb|ADU07367.1| methyltransferase small [Micromonospora sp. L5]
          Length = 489

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/200 (24%), Positives = 73/200 (36%), Gaps = 32/200 (16%)

Query: 61  YNVRLTLSSDTFEP---RPETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAV 111
           Y     + +D   P   RP   L  +  L         +    +  V   LDLGTG+G  
Sbjct: 107 YGDDWWVLADV--PASARPGRPLHAEHVLGIGGATQTLISAAVRPTVDTALDLGTGSGVQ 164

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVS 170
            L L   +   +    D+S +AL  A + AV NG    ++ L+ D  + V G  FD++VS
Sbjct: 165 ALHLGTHAR--RVTATDVSERALRFAATTAVLNGQD--WELLRGDMVAPVAGRRFDLVVS 220

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-----SV 225
           NPP++                  +  D G  G +    +A      L + G        V
Sbjct: 221 NPPFVVGPGTTT----------HVYRDSGRVGDAIGAELAAAAPDLLTEGGTMQYLANWV 270

Query: 226 EI-GYNQKVDVVRIFESRKL 244
            + G +    V   F    L
Sbjct: 271 HVTGEDWAERVTGWFAGTGL 290


>gi|172079535|ref|ZP_02708258.2| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC1873-00]
 gi|172043293|gb|EDT51339.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC1873-00]
          Length = 317

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V  + ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRELAESAGFFL 291


>gi|227486795|ref|ZP_03917111.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235265|gb|EEI85280.1| TrmA family RNA methyltransferase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 456

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             I    +   ++  +S  +F  +P      +     +    E    + ILDL +GTG +
Sbjct: 271 EYIT--EEMMGLQFRISPFSF-FQPNVFT-AEKLYQKAFDLAEIDKTMDILDLYSGTGTI 326

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVI 168
              +   +      G++I  +A+E AK NA  NG+ +  + L  D    +E     +DV+
Sbjct: 327 TQLMASVAKSA--TGIEIVEEAVEKAKENARINGL-DNVNFLCGDVLEEIEKVGNKYDVV 383

Query: 169 VSNPP 173
           V +PP
Sbjct: 384 VLDPP 388


>gi|312069129|ref|XP_003137538.1| hypothetical protein LOAG_01952 [Loa loa]
 gi|307767298|gb|EFO26532.1| hypothetical protein LOAG_01952 [Loa loa]
          Length = 493

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 8/130 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + + +  D   PR    L     +   L      +    +D+GTG   V   L  +  
Sbjct: 64  FGLDVNIPPDCLVPRIPQRLNYILFIDDLLKANGISENAVGIDIGTGASCVYALLGAKQF 123

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--------WFSSVEGLFDVIVSNP 172
            ++ V  D    A+EIA  N   NG++ER + ++            S  E  F   + NP
Sbjct: 124 GWRFVATDADAFAVEIASQNVEKNGMTERIEVVRVPADCMIKNVVRSHPETEFTFCMCNP 183

Query: 173 PYIESVIVDC 182
           P+ E    + 
Sbjct: 184 PFYEYDEFEE 193


>gi|282848949|ref|ZP_06258338.1| methyltransferase small domain protein [Veillonella parvula ATCC
           17745]
 gi|282581224|gb|EFB86618.1| methyltransferase small domain protein [Veillonella parvula ATCC
           17745]
          Length = 241

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   SD F    +   L+         R   R     +DLGTG+G + L +      
Sbjct: 14  GLQIYQRSDMFRFSFDAIALIH------FCRFNGRHTY--VDLGTGSGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGL-FDVIVSNPPYIE 176
               G++I+   +E+AK +   N   +  + L  D+    +  ++   FD ++ NPP+ +
Sbjct: 65  GHITGIEINETLVELAKRSVEHNRKQDVVNILCGDYRHMTYRDIQDKPFDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E    +  ++L  G   L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSE----ERTLALHDGHTTLCD---VLKSVQSFIKCKGRLWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAF 250
              E          
Sbjct: 178 HELEKFNFQAKRIR 191


>gi|257455130|ref|ZP_05620368.1| methyltransferase small [Enhydrobacter aerosaccus SK60]
 gi|257447463|gb|EEV22468.1| methyltransferase small [Enhydrobacter aerosaccus SK60]
          Length = 201

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 6/128 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +D        +S      PE    +D      L  IE +D    +DLG G G + +   +
Sbjct: 23  QDVLGKPFHFTSTWGIFSPEK---LDEGSLMLLDYIEFKDDDHSIDLGCGYGVLGMTAAR 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYI 175
           E P  + + +D    A+E AK N   N +        S+ F  VE    F +++SN P  
Sbjct: 80  ECPNGQHLLIDKDFVAVEYAKINCQKNNL-NNAQVQLSNGFRDVEKDKKFSLVMSNLPAK 138

Query: 176 ESVIVDCL 183
            S     L
Sbjct: 139 ASKEQHYL 146


>gi|228950583|ref|ZP_04112718.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228809058|gb|EEM55542.1| hypothetical protein bthur0006_240 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 246

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSVSSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|163750313|ref|ZP_02157554.1| hypothetical protein KT99_07049 [Shewanella benthica KT99]
 gi|161329985|gb|EDQ00970.1| hypothetical protein KT99_07049 [Shewanella benthica KT99]
          Length = 250

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 44/155 (28%), Gaps = 16/155 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G G+G + L +  +        +++   A    + N   +   ER  
Sbjct: 36  WAPLTRAKSILDIGAGSGLLSL-MAAQRSEAIITAIELDETAASACERNFQASKWGERLT 94

Query: 152 TLQSDWFSSVEGLFD------VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             Q       +   D       I+ NPPY                    +     D L  
Sbjct: 95  IEQCAIQDFAQQRLDTQVKFEHIICNPPYFNGGTQSKNQ--------LRAKARHTDSLDF 146

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
              +   ++R L  DG  S+ +         +   
Sbjct: 147 S-CLIKAITRLLAADGTASLILPSQSMPKFQQELA 180


>gi|29377172|ref|NP_816326.1| hypothetical protein EF2692 [Enterococcus faecalis V583]
 gi|227519516|ref|ZP_03949565.1| methyltransferase [Enterococcus faecalis TX0104]
 gi|227554183|ref|ZP_03984230.1| methyltransferase [Enterococcus faecalis HH22]
 gi|229544921|ref|ZP_04433646.1| methyltransferase [Enterococcus faecalis TX1322]
 gi|255971904|ref|ZP_05422490.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255974898|ref|ZP_05425484.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256616802|ref|ZP_05473648.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256763322|ref|ZP_05503902.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256957924|ref|ZP_05562095.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256961056|ref|ZP_05565227.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256963802|ref|ZP_05567973.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|257079861|ref|ZP_05574222.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|257090883|ref|ZP_05585244.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257416867|ref|ZP_05593861.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG]
 gi|257420089|ref|ZP_05597083.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|293384554|ref|ZP_06630420.1| methyltransferase [Enterococcus faecalis R712]
 gi|293386783|ref|ZP_06631354.1| methyltransferase [Enterococcus faecalis S613]
 gi|294780413|ref|ZP_06745779.1| methyltransferase small domain protein [Enterococcus faecalis
           PC1.1]
 gi|300860329|ref|ZP_07106416.1| methyltransferase small domain protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|307269629|ref|ZP_07550965.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4248]
 gi|307271749|ref|ZP_07553020.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0855]
 gi|307276934|ref|ZP_07558044.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2134]
 gi|307278756|ref|ZP_07559822.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0860]
 gi|307288686|ref|ZP_07568666.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0109]
 gi|312902521|ref|ZP_07761727.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0635]
 gi|312906380|ref|ZP_07765388.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           512]
 gi|312953719|ref|ZP_07772554.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0102]
 gi|312979461|ref|ZP_07791149.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           516]
 gi|29344638|gb|AAO82396.1| conserved hypothetical protein [Enterococcus faecalis V583]
 gi|227073041|gb|EEI11004.1| methyltransferase [Enterococcus faecalis TX0104]
 gi|227176682|gb|EEI57654.1| methyltransferase [Enterococcus faecalis HH22]
 gi|229309813|gb|EEN75800.1| methyltransferase [Enterococcus faecalis TX1322]
 gi|255962922|gb|EET95398.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255967770|gb|EET98392.1| conserved hypothetical protein [Enterococcus faecalis T2]
 gi|256596329|gb|EEU15505.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200]
 gi|256684573|gb|EEU24268.1| conserved hypothetical protein [Enterococcus faecalis T3]
 gi|256948420|gb|EEU65052.1| conserved hypothetical protein [Enterococcus faecalis DS5]
 gi|256951552|gb|EEU68184.1| conserved hypothetical protein [Enterococcus faecalis Merz96]
 gi|256954298|gb|EEU70930.1| conserved hypothetical protein [Enterococcus faecalis HIP11704]
 gi|256987891|gb|EEU75193.1| conserved hypothetical protein [Enterococcus faecalis JH1]
 gi|256999695|gb|EEU86215.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257158695|gb|EEU88655.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG]
 gi|257161917|gb|EEU91877.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|291078100|gb|EFE15464.1| methyltransferase [Enterococcus faecalis R712]
 gi|291083786|gb|EFE20749.1| methyltransferase [Enterococcus faecalis S613]
 gi|294452513|gb|EFG20949.1| methyltransferase small domain protein [Enterococcus faecalis
           PC1.1]
 gi|300849368|gb|EFK77118.1| methyltransferase small domain protein [Enterococcus faecalis TUSoD
           Ef11]
 gi|306500352|gb|EFM69689.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0109]
 gi|306504562|gb|EFM73766.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0860]
 gi|306506357|gb|EFM75517.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2134]
 gi|306511627|gb|EFM80626.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0855]
 gi|306514046|gb|EFM82631.1| methyltransferase small domain protein [Enterococcus faecalis
           TX4248]
 gi|310627534|gb|EFQ10817.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           512]
 gi|310628366|gb|EFQ11649.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0102]
 gi|310634191|gb|EFQ17474.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0635]
 gi|311287832|gb|EFQ66388.1| methyltransferase small domain protein [Enterococcus faecalis DAPTO
           516]
 gi|315032638|gb|EFT44570.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0017]
 gi|315035201|gb|EFT47133.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0027]
 gi|315143784|gb|EFT87800.1| methyltransferase small domain protein [Enterococcus faecalis
           TX2141]
 gi|315149930|gb|EFT93946.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0012]
 gi|315151818|gb|EFT95834.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0031]
 gi|315159330|gb|EFU03347.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0312]
 gi|315162045|gb|EFU06062.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0645]
 gi|315165360|gb|EFU09377.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1302]
 gi|315168679|gb|EFU12696.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1341]
 gi|315573814|gb|EFU86005.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0309B]
 gi|315579670|gb|EFU91861.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0630]
 gi|315580250|gb|EFU92441.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0309A]
 gi|329570684|gb|EGG52401.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1467]
          Length = 244

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AKIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|331085907|ref|ZP_08334990.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330406830|gb|EGG86335.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 458

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     +   ++    F+P      ++    +     I     + + DL +GT
Sbjct: 266 LYGQDYFYEKIMGLEFKITPFSFFQPNSRGAEVL---YSTVREYIGDIHDMTVYDLFSGT 322

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P   + +GV+I  +A+E AK NA  NG+      +  D F     +E  
Sbjct: 323 GTIAQVLA---PVAKQVIGVEIIEEAVEAAKENAERNGL-HNCRFIAGDVFKVLDEIEEK 378

Query: 165 FDVIVSNPP 173
            DVIV +PP
Sbjct: 379 PDVIVLDPP 387


>gi|325662109|ref|ZP_08150727.1| hypothetical protein HMPREF0490_01465 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471558|gb|EGC74778.1| hypothetical protein HMPREF0490_01465 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 459

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     +   ++    F+P      ++    +     I     + + DL +GT
Sbjct: 266 LYGQDYFYEKIMGLEFKITPFSFFQPNSRGAEVL---YSTVREYIGDIHDMTVYDLFSGT 322

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P   + +GV+I  +A+E AK NA  NG+      +  D F     +E  
Sbjct: 323 GTIAQVLA---PVAKQVIGVEIIEEAVEAAKENAERNGL-HNCRFIAGDVFKVLDEIEEK 378

Query: 165 FDVIVSNPP 173
            DVIV +PP
Sbjct: 379 PDVIVLDPP 387


>gi|315274482|ref|ZP_07869409.1| methyltransferase small domain-containing protein [Listeria marthii
           FSL S4-120]
 gi|313615883|gb|EFR89092.1| methyltransferase small domain-containing protein [Listeria marthii
           FSL S4-120]
          Length = 254

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L      N+R+  S   F         +D+ L      +  R   +I+DL +G 
Sbjct: 17  ERLDYLLAE----NLRIIQSPSVFSFS------IDAVLLAKFSYLPIRKG-KIIDLCSGN 65

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
           G + L LL      K VGV+I  +  ++A  + + N +  + + ++ D  +  +      
Sbjct: 66  GIIPL-LLSTRTEAKIVGVEIQPRLADMANRSILYNHLEAQIEMIEYDLKNITDLIPKER 124

Query: 165 FDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            D++  NPPY  +             +   +   +L                 +  L + 
Sbjct: 125 ADIVTCNPPYFATPNTSLKNTNEHFRIARHEVMCTL----------EDTIRVAASLLKQG 174

Query: 221 GLCSVEIGYNQKVDVVRIFESRKL 244
           G  +      + +D++ +    +L
Sbjct: 175 GKANFVHRPERLLDIIDLMRKYRL 198


>gi|229549187|ref|ZP_04437912.1| methyltransferase [Enterococcus faecalis ATCC 29200]
 gi|229305424|gb|EEN71420.1| methyltransferase [Enterococcus faecalis ATCC 29200]
          Length = 244

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AKIDQIELQPRLADMGQRSILLNKLKKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|114766797|ref|ZP_01445731.1| hypothetical protein 1100011001324_R2601_11876 [Pelagibaca
           bermudensis HTCC2601]
 gi|114540991|gb|EAU44049.1| hypothetical protein R2601_11876 [Roseovarius sp. HTCC2601]
          Length = 247

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 23/189 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   R+ L    ++PR      +D  L      +  +    +L+LG G G     L   
Sbjct: 5   DFLGGRVRL----WQPREGYRAGIDPVL--LAATVPAKPGQSVLELGCGAGPALCCLGAR 58

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
               +  G++I      +A+ N   N ++   + ++ D  +          D +++NPPY
Sbjct: 59  VAGLRLTGLEIQPAYAALARRNLAENALTG--EVIEGDIGAPPFALKALTVDHVLANPPY 116

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
              +    +  +V      ++L  G   L+ +       ++ L   G  +      +   
Sbjct: 117 F-EIESRSIASDVGR---EMAL-AGPAPLADW---VRLAAKRLRVKGTATFI---QRAER 165

Query: 235 VVRIFESRK 243
           +  +  +  
Sbjct: 166 LPELLAAMG 174


>gi|78101439|pdb|2AS0|A Chain A, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna
           Methyltransferase
 gi|78101440|pdb|2AS0|B Chain B, Crystal Structure Of Ph1915 (Apc 5817): A Hypothetical Rna
           Methyltransferase
          Length = 396

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 19/153 (12%)

Query: 44  RSLKHES-IHRIL-GWRDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           R  +    I R+L G   +  +      +  +         +T   +D            
Sbjct: 160 RRREGLPEIERVLLGKEKYRTIIQEGRAKFIVDXR----GQKTGFFLDQRENRLALEKWV 215

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+ T TG   +         + +G+D S +A+E AK NA  NGV +R   +  
Sbjct: 216 QPGDRVLDVFTYTGGFAIHAAIAGAD-EVIGIDKSPRAIETAKENAKLNGVEDRXKFIVG 274

Query: 156 DWFSSVEG------LFDVIVSNPPYIESVIVDC 182
             F   E        FD++V +PP       D 
Sbjct: 275 SAFEEXEKLQKKGEKFDIVVLDPPAFVQHEKDL 307


>gi|193650187|ref|XP_001948397.1| PREDICTED: putative methyltransferase METT10D-like [Acyrthosiphon
           pisum]
          Length = 442

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 13/143 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           IL  +DF ++ + L      P    R    L ++     +    +K      +D+GTG+ 
Sbjct: 57  ILLKKDF-DLDVDLPVGRLVPTVPLRLNYLLWIEDLFNLNYDNTKKIKG---IDIGTGSS 112

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGL 164
            +   L  +   +  VG DI+ ++++ A  N   N +      L+   +      +V+  
Sbjct: 113 CIYPLLAAKQFQWSMVGTDINKESIKNAIKNVEKNNLQHLIQVLEVSEWERLLPVAVDEH 172

Query: 165 FDVIVSNPPYIESVIVDCLGLEV 187
           +D  + NPP+     ++    E 
Sbjct: 173 YDFCMCNPPFHSLSKINSSDDEA 195


>gi|206972576|ref|ZP_03233519.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|229067799|ref|ZP_04201117.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185]
 gi|229176635|ref|ZP_04304040.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W]
 gi|206732478|gb|EDZ49657.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228606802|gb|EEK64218.1| hypothetical protein bcere0005_230 [Bacillus cereus 172560W]
 gi|228715283|gb|EEL67141.1| hypothetical protein bcere0025_240 [Bacillus cereus F65185]
          Length = 246

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   NG+ ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGVRSVQYNGLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSVSSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|149020849|ref|ZP_01835378.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP23-BS72]
 gi|225857377|ref|YP_002738888.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           P1031]
 gi|254783319|sp|C1CMA0|PRMA_STRZP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|147930490|gb|EDK81473.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP23-BS72]
 gi|225725697|gb|ACO21549.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           P1031]
          Length = 316

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V  + ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRELAESAGFFL 290


>gi|288924992|ref|ZP_06418928.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
 gi|288338182|gb|EFC76532.1| ribosomal protein L11 methyltransferase [Prevotella buccae D17]
          Length = 288

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 11/131 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  RILD G GTG + +A  K     + VG DI   ++E  + NA  N V E  +    D
Sbjct: 152 DGKRILDCGCGTGILGIAAAKMGAR-EVVGYDIDEWSVENTRHNAELNHV-ENLEVYHGD 209

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLG--LEVRDFDPRISLDGGIDGLSHYRTIADG 212
               + V GLFDV+++N     + ++  +     V      + L G  +     R I + 
Sbjct: 210 AHVLNHVNGLFDVVLAN--INRNTLLQDMETFKSVLSHGGVLILSGFYE--QDIRPIVEK 265

Query: 213 VSRH-LNKDGL 222
            +R  L + G 
Sbjct: 266 AARLGLKETGR 276


>gi|90022111|ref|YP_527938.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharophagus
           degradans 2-40]
 gi|89951711|gb|ABD81726.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharophagus
           degradans 2-40]
          Length = 426

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 60  FYNVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +  +  SS  ++ P    E   +  L     ++  +    +L++GTG G + +   K 
Sbjct: 162 FLDSSMMYSSAIYKTPSTSLEEAAEFKLDHICKQLNLQPTDHLLEIGTGWGGMAIYAAKH 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               K     IS +    AK      G+  +   LQ D +  ++G FD +VS        
Sbjct: 222 Y-GCKVTTTTISEQQYLYAKQAIEKAGLENKVTLLQKD-YRDLDGQFDKLVS-------- 271

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +   V              G   Y       S  L  DGL  +
Sbjct: 272 --IEMIEAV--------------GYDFYTQYFAKCSSLLKPDGLMLI 302


>gi|57641868|ref|YP_184346.1| DNA methylase [Thermococcus kodakarensis KOD1]
 gi|57160192|dbj|BAD86122.1| predicted DNA methylase [Thermococcus kodakarensis KOD1]
          Length = 209

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 2/110 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L +    + + +   I DLG GTG + +             V+   +ALEIA+ NA
Sbjct: 32  VAAELLWLAHSLGEVEGKVIADLGAGTGVLGIG-AVLLGAENVYAVERDKEALEIARENA 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            + GV ++ + + +D  S      D ++ NPP+   V        ++ F+
Sbjct: 91  RSLGVEDKIEFVNADV-SEFSVNVDTVIMNPPFGSQVKHADRPFLIKAFE 139


>gi|312951284|ref|ZP_07770185.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0102]
 gi|310630720|gb|EFQ14003.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0102]
 gi|315152590|gb|EFT96606.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0031]
          Length = 315

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKEIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|229159209|ref|ZP_04287234.1| hypothetical protein bcere0009_230 [Bacillus cereus R309803]
 gi|228624224|gb|EEK81025.1| hypothetical protein bcere0009_230 [Bacillus cereus R309803]
          Length = 246

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 20/201 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  S   F    +  LL D A               +LDL TG   V L LL      
Sbjct: 17  MKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTKG 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESV 178
              GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++ 
Sbjct: 69  NITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQTP 128

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                    ++ +  +++      +     +    SR + + G  +      + +D+V +
Sbjct: 129 ATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSRLVKQGGKVAFVHRPGRLLDIVTL 182

Query: 239 FESRKLFLVNAFKDY--GGND 257
               K+        Y   G +
Sbjct: 183 MRKYKIEPKRVRFVYPKAGKE 203


>gi|27065262|pdb|1KXZ|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065263|pdb|1KXZ|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065264|pdb|1KXZ|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065265|pdb|1KXZ|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065266|pdb|1KXZ|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065267|pdb|1KXZ|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065268|pdb|1KXZ|G Chain G, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065269|pdb|1KXZ|H Chain H, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, P1 Spacegroup
 gi|27065280|pdb|1L3B|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065281|pdb|1L3B|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065282|pdb|1L3B|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065283|pdb|1L3B|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065284|pdb|1L3B|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065285|pdb|1L3B|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065286|pdb|1L3B|G Chain G, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065287|pdb|1L3B|H Chain H, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
 gi|27065292|pdb|1L3C|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup With Short
           Cell
 gi|27065293|pdb|1L3C|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup With Short
           Cell
 gi|27065294|pdb|1L3C|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup With Short
           Cell
 gi|27065295|pdb|1L3C|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, C2 Spacegroup With Short
           Cell
 gi|27065298|pdb|1L3I|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|27065299|pdb|1L3I|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|27065300|pdb|1L3I|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|27065301|pdb|1L3I|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|27065302|pdb|1L3I|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|27065303|pdb|1L3I|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
           From M. Thermoautotrophicum, Adohcy Binary Complex
 gi|33356903|pdb|1F38|A Chain A, X-Ray Crystallographic Structure Of Precorrin 8w
           Decarboxylase, The Product Of Gene Mt0146 In The
           Methanobacterium Thermoautotrophicum Genome
 gi|33356904|pdb|1F38|B Chain B, X-Ray Crystallographic Structure Of Precorrin 8w
           Decarboxylase, The Product Of Gene Mt0146 In The
           Methanobacterium Thermoautotrophicum Genome
 gi|33356905|pdb|1F38|C Chain C, X-Ray Crystallographic Structure Of Precorrin 8w
           Decarboxylase, The Product Of Gene Mt0146 In The
           Methanobacterium Thermoautotrophicum Genome
 gi|33356906|pdb|1F38|D Chain D, X-Ray Crystallographic Structure Of Precorrin 8w
           Decarboxylase, The Product Of Gene Mt0146 In The
           Methanobacterium Thermoautotrophicum Genome
          Length = 192

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 48/161 (29%), Gaps = 39/161 (24%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E       +D+G GTG V L L       +   +D + +A+   + N   +G+ +     
Sbjct: 30  EPGKNDVAVDVGCGTGGVTLELAGRVR--RVYAIDRNPEAISTTEXNLQRHGLGDNVTLX 87

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           + D   ++  + D+                          I++ GG  G    + I   +
Sbjct: 88  EGDAPEALCKIPDI-------------------------DIAVVGGSGG--ELQEILRII 120

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
              L   G             V  I    K       +D G
Sbjct: 121 KDKLKPGGRII----------VTAILLETKFEAXECLRDLG 151


>gi|254180592|ref|ZP_04887190.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1655]
 gi|184211131|gb|EDU08174.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1655]
          Length = 300

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D   S      +G FD++V+N
Sbjct: 212 ---RADVTYSLPDDCPDGEFDIVVAN 234


>gi|313888904|ref|ZP_07822564.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845077|gb|EFR32478.1| ribosomal protein L11 methyltransferase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 301

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 18/132 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            I D+G G+G + +A LK     + + VDI  K ++ +  NA  N + ++ D  + +   
Sbjct: 166 EIFDIGCGSGILAIAGLKLGAK-RALAVDIDDKCIDASHENADLNNLEDKMDIKKGNLLD 224

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG----VSR 215
            V+G  D+IVSN      +I + +  E+++    +       G+     I       V  
Sbjct: 225 VVKGRADLIVSN------IIAEIIVDEIKNLKNHM----DKGGIFITSGIIKERRKMVID 274

Query: 216 HLNKDGLCSVEI 227
            L ++G    EI
Sbjct: 275 ALKENG---FEI 283


>gi|71909548|ref|YP_287135.1| ribosomal protein L11 methyltransferase [Dechloromonas aromatica
           RCB]
 gi|123626321|sp|Q478R6|PRMA_DECAR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|71849169|gb|AAZ48665.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Dechloromonas aromatica RCB]
          Length = 296

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LD G G+G + +A  +        GVDI  +A+E A++NA  NG       L +D
Sbjct: 164 EACTVLDYGCGSGILAIAAARLGAG-HVAGVDIDPQAVEAARANAERNG----VTALFAD 218

Query: 157 WFSSVEGLFDVIVSN 171
             + V G +DV+V+N
Sbjct: 219 SATPVAGEYDVVVAN 233


>gi|256619450|ref|ZP_05476296.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis ATCC
           4200]
 gi|256598977|gb|EEU18153.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis ATCC
           4200]
          Length = 315

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVATAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|238920913|ref|YP_002934428.1| methyltransferase small [Edwardsiella ictaluri 93-146]
 gi|262828256|sp|C5BAI6|TRMN6_EDWI9 RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|238870482|gb|ACR70193.1| methyltransferase small [Edwardsiella ictaluri 93-146]
          Length = 247

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 17/175 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DT 152
           + D   ILD+G+G+G + L + + S   +  GV+I   A    + N + +    R    T
Sbjct: 46  RGDERHILDIGSGSGVLALMMAQRS-TAQVDGVEIEPGAATQGQENFLASPWPTRLTMHT 104

Query: 153 LQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L    FS+  G  +D+IVSNPPY    +                     D L H   +  
Sbjct: 105 LSLQAFSAGCGRRYDLIVSNPPYFAPGVACRTAARATAR--------YTDSLDHA-ALLR 155

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN--AFKDYGGND--RVLLF 262
             +    +DG  ++ +       VV    +    L+   A +D       R LL 
Sbjct: 156 HAAELSCEDGRLALVLPVEAAESVVSKGMTHGWHLLRRTAVRDRADKPVRRTLLL 210


>gi|172035902|ref|YP_001802403.1| hypothetical protein cce_0986 [Cyanothece sp. ATCC 51142]
 gi|171697356|gb|ACB50337.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 401

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 35/188 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R    + +RILD G GTG     L+  +P  + VGVDIS KALEIA+     
Sbjct: 41  AAYNFCTGRKPATENIRILDAGCGTGVGTEYLILLNPHAEIVGVDISEKALEIAQKRIQQ 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           +GV+        F  L  +    +EG FD+I                + V    P     
Sbjct: 101 SGVAANHNHPISFHHLPLEEADKIEGEFDLINC--------------VGVLHHLP----- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR-KLFLVNAFKDYGGN 256
              D ++  + +    S+ L   G+  + +        +++ +    L       DY   
Sbjct: 142 ---DPIAGIKAL----SKKLAPGGIFHIFVYAELGRWEIQLMQKAISLLQTETKGDY--K 192

Query: 257 DRVLLFCR 264
           D V +  +
Sbjct: 193 DGVFVGRK 200


>gi|262163831|ref|ZP_06031571.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223]
 gi|262027811|gb|EEY46476.1| ribosomal protein L11 methyltransferase [Vibrio mimicus VM223]
          Length = 295

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 67/196 (34%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV  + +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVENQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+       L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPAGLVADVVVANIL----AGP-----LRELSPIIKGLLKPGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|220929217|ref|YP_002506126.1| ribosomal protein L11 methyltransferase [Clostridium cellulolyticum
           H10]
 gi|254783296|sp|B8I303|PRMA_CLOCE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|219999545|gb|ACL76146.1| ribosomal protein L11 methyltransferase [Clostridium cellulolyticum
           H10]
          Length = 316

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D   +LD+G GTG + + +  +    +   +DI   A+++A+ N   N    +    ++
Sbjct: 173 KDDTEVLDIGCGTGILSI-IAAKLGAKQVEAIDIDEVAVKVARENIELNQEITKVSARKA 231

Query: 156 DW--FSSVEGLFDVIVSN 171
                 + E  +D+IV+N
Sbjct: 232 VLSDLKAEEHKYDIIVAN 249


>gi|294508850|ref|YP_003572909.1| Conserved hypothetical protein containing RNA methylase domain
           [Salinibacter ruber M8]
 gi|294345179|emb|CBH25957.1| Conserved hypothetical protein containing RNA methylase domain
           [Salinibacter ruber M8]
          Length = 369

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 26/159 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR   +  V  AL   L  ++      +LD   G+G + L         +  G D + 
Sbjct: 191 YQPRAALKANVAYALLR-LAHLDAPPNT-LLDPFCGSGTILLEAADLWADTQCYGSDWNE 248

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIESVIVDCLGLE 186
           +A+  A++N    G+S+R    + D +  ++  F     D+IV+NPP+   +        
Sbjct: 249 EAVSGARTNVDLAGLSDRIAIRKGDVW-HLDETFADVTADLIVTNPPFGVRMASSM---- 303

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             DF P             YR +   +   L   GL  +
Sbjct: 304 --DFYP------------FYRRVLGQMGAVLRPGGLVVM 328


>gi|255975486|ref|ZP_05426072.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T2]
 gi|307277698|ref|ZP_07558784.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0860]
 gi|255968358|gb|EET98980.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T2]
 gi|306505577|gb|EFM74761.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0860]
          Length = 315

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|148273626|ref|YP_001223187.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831556|emb|CAN02523.1| putative methyltransferase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 539

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 11/130 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            V   LDLGTG G   L   + +   + V  DIS +AL  A  NA  NG++   +     
Sbjct: 170 PVASALDLGTGCGIQALHASRHAD--RVVATDISARALAFAALNAALNGIT-TIELRLGS 226

Query: 157 WFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            F  V G  FD IVSNPP++ +   + +      ++ R   D G+ G +    +   ++ 
Sbjct: 227 LFEPVAGERFDHIVSNPPFVITPRAEGVPA----YEYR---DAGLVGDALVEGVVADLAD 279

Query: 216 HLNKDGLCSV 225
           HL   GL  +
Sbjct: 280 HLTPGGLAQL 289


>gi|150401142|ref|YP_001324908.1| hypothetical protein Maeo_0713 [Methanococcus aeolicus Nankai-3]
 gi|150013845|gb|ABR56296.1| protein of unknown function DUF890 [Methanococcus aeolicus
           Nankai-3]
          Length = 267

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 25/181 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +    D   P P     ++  L       E   +  +L++GTG+G + + + K   
Sbjct: 49  FGLNMEFHKDALIPTP-----INRYLFIKNIFDENPHIKNVLEIGTGSGIISILIAKHY- 102

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSD------WFSSVEGLFDVI 168
             K    D   + +++A++N   N  +      +    + S+              FD+I
Sbjct: 103 NCKIYMTDTVEEYVDLAQNNIENNYKNIKINNPDDITVINSNGKIINGIKELENIKFDLI 162

Query: 169 VSNPPYIESVIVDCL----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +S PP+ +   V       G +    +    + GG  G      I    S  LNK+GL +
Sbjct: 163 ISYPPFYDDNSVASKRSFGGADATSIE---LIGGGKYGEKFSCDIIMEGSSRLNKNGLIA 219

Query: 225 V 225
           +
Sbjct: 220 I 220


>gi|326484674|gb|EGE08684.1| DUF890 domain-containing protein [Trichophyton equinum CBS 127.97]
          Length = 432

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 51/154 (33%), Gaps = 17/154 (11%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL--------LVDSALAFSLPRIEKRDVVRILDLGTGT 108
            RDF  + + L  D   P     L        L+D               V  LD+GTG+
Sbjct: 51  RRDF-GLEVELPDDRLCPPVPNRLNYILWLQDLIDCTGDDYHEGFNADRDVVGLDIGTGS 109

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L        +  V  DI  K L+ A+ N   N +  R   + S     +      
Sbjct: 110 SCIYPLLGAVHRKRWTFVATDIDKKNLQYARQNVQRNNLQSRIQVVDSVPDGPLIPLDRI 169

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
              + D  + NPP+ ES        E +  +P  
Sbjct: 170 QLKMLDFTMCNPPFYESHEEMKQLAEEKQNEPLS 203


>gi|39998409|ref|NP_954360.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|39985356|gb|AAR36710.1| ribosomal protein L11 methyltransferase, putative [Geobacter
           sulfurreducens PCA]
 gi|298507353|gb|ADI86076.1| methyltransferase, putative [Geobacter sulfurreducens KN400]
          Length = 198

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 33/167 (19%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L RI     +R LDLG+GTG + +A          V VDI  KA     +N   NGV++R
Sbjct: 54  LERIPGLTGMRGLDLGSGTGILAIA-AVRLGAASVVAVDIDPKAAASCAANVRLNGVADR 112

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             T+  +  S   GL+D++++N  Y                D  ++L G           
Sbjct: 113 VFTVCGELASVGRGLYDLLMAN-IYA---------------DIHLALAG----------- 145

Query: 210 ADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL--FLVNAFKDY 253
            + V+R     G   +  I    K DV R F +       +   +DY
Sbjct: 146 -EMVARV-RPGGWLLLSGIPLQDKFDVQRRFANLGCIQTDLRIMEDY 190


>gi|29376498|ref|NP_815652.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           V583]
 gi|38605218|sp|Q820A9|PRMA_ENTFA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|29343962|gb|AAO81722.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           V583]
          Length = 315

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|222149109|ref|YP_002550066.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4]
 gi|254782824|sp|B9JXT0|PRMA_AGRVS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221736094|gb|ACM37057.1| ribosomal protein L11 methyltransferase [Agrobacterium vitis S4]
          Length = 290

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 59/170 (34%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R     LDLGTG+G + +A+ K       +  DI   A+ +AK N   NG
Sbjct: 140 LEMIDSVVRARRPRNALDLGTGSGVLAIAVRKLV-NVPVLATDIDPIAVRVAKENGTRNG 198

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V    +   +  F S      G FD+I++N   +   ++                     
Sbjct: 199 VPNGIEWRTAPGFHSTAFGEFGPFDLIIAN--ILARPLM--------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q+  V+  +    +  V   
Sbjct: 236 ------KMAPQLVTHLAPGGSVILSGILASQRWKVIAAYNGAGVKHVRTI 279


>gi|163814921|ref|ZP_02206309.1| hypothetical protein COPEUT_01072 [Coprococcus eutactus ATCC 27759]
 gi|158449860|gb|EDP26855.1| hypothetical protein COPEUT_01072 [Coprococcus eutactus ATCC 27759]
          Length = 326

 Score = 65.5 bits (159), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 64/234 (27%), Gaps = 76/234 (32%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----- 116
             ++  +S  F    +  LL +            +   R LDLGTGTG + + L      
Sbjct: 47  GYQIIQNSGMFCFGMDAVLLANYV--------RFKRGGRYLDLGTGTGIIPILLAAKEYG 98

Query: 117 -------------------------------------------KESPFFKGVGVDISCKA 133
                                                      K +   + +G+++    
Sbjct: 99  DEALTREERLAGLNADDYRSSHDCIAVDGVTNSDVGATQQPSGKMADGARFIGIELQPAC 158

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESV---IVDCLGLE 186
            ++A  +   NG+         D         +  FD++ SNPPYI+             
Sbjct: 159 ADMAARSVSLNGLDGLVRIDNGDIKEVSCNYKKASFDIVTSNPPYIKGSHGLENPDAPKN 218

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +   +  ++L            +       L   G   +     +   +  IFE
Sbjct: 219 IARHEVHVTL----------EQVVAAAEHALKPGGSFYMIH---KPFRLAEIFE 259


>gi|168486374|ref|ZP_02710882.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC1087-00]
 gi|183570629|gb|EDT91157.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC1087-00]
          Length = 316

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVADG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|229100823|ref|ZP_04231638.1| hypothetical protein bcere0019_320 [Bacillus cereus Rock3-28]
 gi|228682590|gb|EEL36652.1| hypothetical protein bcere0019_320 [Bacillus cereus Rock3-28]
          Length = 246

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|209884397|ref|YP_002288255.1| ribosomal protein L11 methyltransferase [Oligotropha
           carboxidovorans OM5]
 gi|209872593|gb|ACI92389.1| ribosomal protein L11 methyltransferase [Oligotropha
           carboxidovorans OM5]
          Length = 283

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 41/180 (22%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L    PR       R+LDLGTGTG + +A  K       +  DI  +++ +A  
Sbjct: 131 LLLDRVLHRRAPR-------RVLDLGTGTGVLAIAAAKALRRP-ILASDIDPQSVLVAHD 182

Query: 140 NAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           NAV NGV +  +T Q+  F     +  G FD++++N           L   +R   P ++
Sbjct: 183 NAVLNGVGQYVETFQAIGFGSPRFAQAGPFDLVLAN----------ILANPLRQLAPAMA 232

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
                      R +A      L+  GL        Q   V+  + ++ L LV  + D  G
Sbjct: 233 -----------RHVAPSGHVILS--GLL-----PPQARSVIAAYRAQGLRLVRRY-DLDG 273


>gi|84683977|ref|ZP_01011879.1| hypothetical protein 1099457000262_RB2654_16051 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667730|gb|EAQ14198.1| hypothetical protein RB2654_16051 [Rhodobacterales bacterium
           HTCC2654]
          Length = 253

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +PR      VD         +   D   +LDLG G GA  L L    P  + VGV+    
Sbjct: 22  QPRDGYRAGVDPVF--LAASVAAHDGESVLDLGCGAGAAGLCLATRVPGIRLVGVERQAD 79

Query: 133 ALEIAKSNAVTNGVS-ERFDTLQSDWFSSV-EGLFDVIVSNPPY 174
             ++A+ N+  N +  +  +   SD  S V E  +D ++ NPPY
Sbjct: 80  YADLARKNSFDNDIDMDVVEADISDLPSEVKEESYDHVIMNPPY 123


>gi|256762905|ref|ZP_05503485.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T3]
 gi|256684156|gb|EEU23851.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T3]
          Length = 315

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|172035682|ref|YP_001802183.1| putative methyltransferase [Cyanothece sp. ATCC 51142]
 gi|171697136|gb|ACB50117.1| putative methyltransferase [Cyanothece sp. ATCC 51142]
          Length = 247

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 14/119 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F + +L       +  P  +L++D+ +A         D  RILDLG GTG + L LLK  
Sbjct: 19  FADTKLF-DRGIRQLIPHYDLMLDTLVACV-----SIDAHRILDLGCGTGELSLKLLKHC 72

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--------LFDVIVS 170
           P  K + VD S + LE+AKS        ER   +Q D+ +   G         FD  VS
Sbjct: 73  PNAKVMAVDYSPRMLEMAKSKLEKTEFLERIRFIQGDFGAWANGDMKKEIGTNFDACVS 131


>gi|150390796|ref|YP_001320845.1| ribosomal protein L11 methyltransferase [Alkaliphilus
           metalliredigens QYMF]
 gi|166989892|sp|A6TSL8|PRMA_ALKMQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|149950658|gb|ABR49186.1| ribosomal protein L11 methyltransferase [Alkaliphilus
           metalliredigens QYMF]
          Length = 317

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +   K     K + VD+   A+ + + N   N VS+  +    +    
Sbjct: 179 VFDIGCGSGILSIVAAKLGAE-KVIAVDLDGTAIRVTQENVDANDVSDIVEVRHGNLMDV 237

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           V    DVIV+N   I + I+  L  +V++F
Sbjct: 238 VTSRADVIVAN---IIADIIILLSKDVKNF 264


>gi|146277274|ref|YP_001167433.1| ribosomal L11 methyltransferase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555515|gb|ABP70128.1| LSU ribosomal protein L11P methyltransferase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 291

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A     P    +  DI   A+E+A++N   NG+  R   L++  
Sbjct: 149 PAKVADVGCGTAVLAMAAASVFPEALVIASDIDEVAVEVAEANVAINGLGGRVTCLEAAG 208

Query: 158 FS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F     + E  FD++ +N   I    +  L   +              GL+         
Sbjct: 209 FDHPRLAAEAPFDLVFAN---ILKGPLIELAPAMAAH------VAPGGGLAIL------- 252

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   + + + +    L  A +D G
Sbjct: 253 ------SGLLVV-----QADSITKAYLAEGFELA-AREDLG 281


>gi|317013276|gb|ADU83884.1| hypothetical protein HPLT_07495 [Helicobacter pylori Lithuania75]
          Length = 238

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYAYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F+    D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDNKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|89071135|ref|ZP_01158333.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola
           granulosus HTCC2516]
 gi|89043320|gb|EAR49543.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Oceanicola
           granulosus HTCC2516]
          Length = 399

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 32/159 (20%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            + P P+  L  ++A       I ++       R+LD+G G G + L L ++    + VG
Sbjct: 146 AYFPEPDMSL--EAAQEAKKRHIARKLLIEPGDRVLDIGCGWGGMALTLARDF-GARVVG 202

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           V +S +   IA+       +S+R D    D +  VEG F+ IVS                
Sbjct: 203 VTLSEEQHRIARERVAQAQLSDRIDIRLQD-YREVEGPFERIVS---------------- 245

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V  F+          G +H+R     V+  L+  G+  +
Sbjct: 246 VGMFE--------HVGATHFREYFAKVAELLSPKGVALI 276


>gi|229582068|ref|YP_002840467.1| methylase [Sulfolobus islandicus Y.N.15.51]
 gi|228012784|gb|ACP48545.1| methylase [Sulfolobus islandicus Y.N.15.51]
          Length = 207

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 26/163 (15%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLK 117
           +F   +L L+  T+EP  +T++L        L  ++     ++LD+G+G+G + + +L+ 
Sbjct: 8   EFRGFKLCLNDQTYEPSDDTDIL--------LNLLKVGKGEKVLDMGSGSGILGIWSLIM 59

Query: 118 ESPFFKGVGVDISCKA----LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
                K + VDI+  A    L   K N            L  D  S +    FDV + NP
Sbjct: 60  ---GGKVMFVDINPYATTSTLCSLKVN-NLYKSPNYLGVLNCDLLSCLRKYDFDVAIFNP 115

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           PY+     +             S  GG DG          V  
Sbjct: 116 PYLPVEEYNEWIG--------YSWSGGKDGSKVLVDFLKTVKA 150


>gi|227545383|ref|ZP_03975432.1| precorrin-6B methyltransferase [Lactobacillus reuteri CF48-3A]
 gi|300908537|ref|ZP_07126000.1| precorrin-8W decarboxylase [Lactobacillus reuteri SD2112]
 gi|112945128|gb|ABI26377.1| precorrin-8W decarboxylase [Lactobacillus reuteri]
 gi|227184665|gb|EEI64736.1| precorrin-6B methyltransferase [Lactobacillus reuteri CF48-3A]
 gi|300893944|gb|EFK87302.1| precorrin-8W decarboxylase [Lactobacillus reuteri SD2112]
          Length = 184

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 40/173 (23%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              A S+ +++  +   +LD+G GTG++ +   +E        V+++   ++I + N   
Sbjct: 17  EVRAISIDKLDLSNKKSMLDVGAGTGSISIQAAREFKQLAVTAVEMNPDGIDIIQQNINK 76

Query: 144 NGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            G+      +Q    + + +  +D I                             GG  G
Sbjct: 77  FGL-NNIKLVQGTAPADIPDQKYDAI---------------------------FVGGS-G 107

Query: 203 LSHYRTIADGVSRHLNKDG-----LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +H   I    S HLN+ G         E      + V ++ +      +   
Sbjct: 108 -THLNEIIRFASTHLNEGGAIGLNFILFE----NAMQVEKLLQDNGFKEIELI 155


>gi|259487544|tpe|CBF86301.1| TPA: TAM domain methyltransferase, putative (AFU_orthologue;
           AFUA_2G15860) [Aspergillus nidulans FGSC A4]
          Length = 373

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 31/136 (22%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +  P  ++    RILD+GTGTGA  L + ++ P  + +G D+S       + +      +
Sbjct: 128 YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEIIGTDLSPI-----QPSFSPPNCT 182

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              D  +SDW  S +  FD       YI +  +                 GG  G++ + 
Sbjct: 183 FIIDDAESDWAFSKDEPFD-------YIHARSM-----------------GG--GIADWD 216

Query: 208 TIADGVSRHLNKDGLC 223
            +      HL   G  
Sbjct: 217 RLFRQAYNHLKPGGWL 232


>gi|197106641|ref|YP_002132018.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
           zucineum HLK1]
 gi|196480061|gb|ACG79589.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
           zucineum HLK1]
          Length = 405

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 37/216 (17%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILG-----WRDFYNVRLTLSSDTFEPRPETELLVD 83
            L    R     A  R     ++          +R F +  +  S   F  RP+   L +
Sbjct: 94  PLARWWRDRRREANHRRAARRNVAHHYDLSNELYRRFLDEDMQYSCAYFA-RPD-MTLEE 151

Query: 84  SALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           + LA       ++  +    +LD+G G G + L L +E+   +  G+ +S + L +A+  
Sbjct: 152 AQLAKKRHIAAKLALQPGQTVLDIGCGWGGMALTLAEET-GVEVDGITLSTEQLALAQQR 210

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A   G+S R     +D +  V G +D IVS                V  F+      G  
Sbjct: 211 AEAKGLSGRARFSLTD-YRDVPGPYDRIVS----------------VGMFE----HVGRP 249

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDV 235
           +    Y+   DGV+R L  DG+  +  IG  +  +V
Sbjct: 250 N----YQAYFDGVARLLKDDGVALIHSIGRPEGPNV 281


>gi|195479026|ref|XP_002086546.1| GE22791 [Drosophila yakuba]
 gi|194186336|gb|EDW99947.1| GE22791 [Drosophila yakuba]
          Length = 615

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 54/162 (33%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    +FF                   +      +    + 
Sbjct: 309 LMLVAGIYSSNLSGDEQVELKQELKFFYEELAKDAPYKCTSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P     +   +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPT----EDTTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|307275915|ref|ZP_07557048.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX2134]
 gi|306507245|gb|EFM76382.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX2134]
          Length = 315

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 50/150 (33%), Gaps = 31/150 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  +          D+   A+  AK N   N ++       +
Sbjct: 174 RGGETVLDVGTGSGVLSIA-SRYLEAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    ++   DVIV+N                      ++             + +   R
Sbjct: 233 DLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
            L +DG   +  I  ++K  V+        
Sbjct: 264 LLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|296117745|ref|ZP_06836329.1| transferase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969476|gb|EFG82717.1| transferase [Corynebacterium ammoniagenes DSM 20306]
          Length = 516

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 16/169 (9%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
                F +V  ++      P  +  L + +A    L       V  +LDLGTG+G   L 
Sbjct: 123 TNRWVFSDVDASIVDHV--PGSDHVLGLGAASLSLLRTTPTTPVHSVLDLGTGSGVQLLG 180

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPP 173
             + +   + V  D+  +AL +A++  +    +   D     WF  V +  FD IV+NPP
Sbjct: 181 --QLNSAERIVATDVHERALALAQA-TLATTDATHVDFRHGSWFEPVADERFDRIVANPP 237

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           ++  +       EV      +  D G+D       +    + HLN  G+
Sbjct: 238 FVVGL------PEVG----HVYRDSGLDLDGASELVVSEAAEHLNPGGM 276


>gi|282883188|ref|ZP_06291787.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis
           315-B]
 gi|281297000|gb|EFA89497.1| ribosomal protein L11 methyltransferase [Peptoniphilus lacrimalis
           315-B]
          Length = 301

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  + I D+G G+G + +A   +        VDI  K ++ ++ NA  N V ++    + 
Sbjct: 163 KKDMNIFDIGCGSGILGIA-AIKLGGKSATLVDIDDKCIKASEENAKLNEVYDKVKVKKG 221

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +    +EG  D+IVSN   I  +IVD + 
Sbjct: 222 NLLDVIEGKCDIIVSN--IIAEIIVDEIS 248


>gi|269217822|ref|ZP_06161676.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269212757|gb|EEZ79097.1| methyltransferase domain protein [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 242

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 54/150 (36%), Gaps = 31/150 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI------SCKALEIA 137
           +     L   +  DV RILDLG G GAV +   +  P  K  G+D+      S    E A
Sbjct: 69  AVWRRILSETDDADVERILDLGCGRGAVIVMAAQRFPEAKLTGIDLWRKSDQSGNGEEAA 128

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            +NA  NGV  R D +  D       +G FD+I +      S+ +  +    R       
Sbjct: 129 TANAKANGVDSRIDFVTGDMTKLPFEDGSFDLITA------SMSIHNIPKAERR------ 176

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      R I     R L   G   +
Sbjct: 177 ----------ARAI-REAVRVLKPGGRIVI 195


>gi|126453605|ref|YP_001067742.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1106a]
 gi|226196830|ref|ZP_03792409.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314839|ref|ZP_04813855.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1106b]
 gi|126227247|gb|ABN90787.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1106a]
 gi|225931090|gb|EEH27098.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           Pakistan 9]
 gi|242138078|gb|EES24480.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1106b]
          Length = 302

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 156 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 213

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D   S      +G FD++V+N
Sbjct: 214 ---RADVTYSLPDDCPDGEFDIVVAN 236


>gi|317182709|dbj|BAJ60493.1| hypothetical protein HPF57_1419 [Helicobacter pylori F57]
          Length = 238

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|160934888|ref|ZP_02082274.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753]
 gi|156866341|gb|EDO59713.1| hypothetical protein CLOLEP_03763 [Clostridium leptum DSM 753]
          Length = 246

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 29/177 (16%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +T LL D  L             + ++LG G GA+ +  L+E P      V+I  +A+++
Sbjct: 28  DTILLADFCL--------PVKGKQAVELGAGCGAISMIWLREQPPAHITAVEIQEEAVDL 79

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIESVIVDCLGLE----V 187
            +     N   E    L+ D    ++G       D++  NPPY ++V    +  E    +
Sbjct: 80  LRRTVKYNEKEELVTVLREDL-RQLQGKLPMGAMDLVACNPPY-KTVGAGLVNAEEGKRI 137

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              +  ++             +    +  L   G   +     +  DV+       L
Sbjct: 138 ARHE--VACT--------IEDVCLSAAGLLKYGGSLFLCHRVERMCDVIEAMREAGL 184


>gi|149003242|ref|ZP_01828138.1| hypothetical protein CGSSp14BS69_02514 [Streptococcus pneumoniae
           SP14-BS69]
 gi|147758702|gb|EDK65699.1| hypothetical protein CGSSp14BS69_02514 [Streptococcus pneumoniae
           SP14-BS69]
          Length = 161

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 19/150 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FS 159
           D   G GAV L         + + V+I  +  ++A+ +   NG+ E+   +  D     +
Sbjct: 2   DFCAGNGAVGL-FASTRTQAQILSVEIQERLADMAERSVRLNGLEEQMQVICDDLKNMPA 60

Query: 160 SVEG-LFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVS 214
            ++G   D+I+ NPPY +      L       +   +   +L            I     
Sbjct: 61  HIQGSKVDMILCNPPYFKVDPYSNLNESEHYLLARHEITTNL----------EEICHSAQ 110

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             L  +G  ++    ++ +D++   +   L
Sbjct: 111 SILKSNGRLAMVHRPDRLLDILDTLKRHNL 140


>gi|327472985|gb|EGF18412.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK408]
          Length = 318

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPDMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIKADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAETAGFFL 292


>gi|326514400|dbj|BAJ96187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 287

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 8/162 (4%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG----AVCLALLKESPFFK 123
             + +EP  ++  LVD+ L+     +  +  +  +++G G+G    ++ + L +     +
Sbjct: 51  HPEVYEPCDDSFALVDALLSDKAQLLTLQPSL-CMEVGCGSGYVITSLAIMLRQLGSGTQ 109

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
            +  DI+  A+E  ++    +GV    D + +D  S +E     +V     +    V   
Sbjct: 110 YLATDINQHAVETTQATLEAHGV--HADVIATDIVSGLEKRLAGMVDVV-VVNPPYVPTP 166

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             E+       S  GG++G      I   V   L++ G   +
Sbjct: 167 EEEIGMNGIASSWAGGLNGRQVIDRILPAVRELLSEKGCLYM 208


>gi|93004886|ref|YP_579323.1| methyltransferase small [Psychrobacter cryohalolentis K5]
 gi|92392564|gb|ABE73839.1| methyltransferase small [Psychrobacter cryohalolentis K5]
          Length = 202

 Score = 65.5 bits (159), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTF-EPRPETELL-------VDSALAFSLPRIEKRD 97
           + H     +L    ++   +    D   +P              +D      L  ++ + 
Sbjct: 1   MSHRPSSDLLEKAKYWREDINFREDVLGKPFDFATTWGIFSPQKLDDGSLMLLDYVDFQA 60

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
               +DLG G G + +A  +E P  +   +D    A+E A+ N   NG+    D   S+ 
Sbjct: 61  DDDSIDLGCGYGVLGMAAARECPNGQHTLIDKDFMAVEYARLNCEKNGLK-NVDVHLSNG 119

Query: 158 FSSV--EGLFDVIVSNPPYIESVIVDCL 183
           F+ V  +  F +++SN P         L
Sbjct: 120 FNHVAKDKDFSLVMSNLPAKVGKEQHYL 147


>gi|227519318|ref|ZP_03949367.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0104]
 gi|227555474|ref|ZP_03985521.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           HH22]
 gi|229545441|ref|ZP_04434166.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1322]
 gi|229549685|ref|ZP_04438410.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis ATCC
           29200]
 gi|255972383|ref|ZP_05422969.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T1]
 gi|256853490|ref|ZP_05558860.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T8]
 gi|256959289|ref|ZP_05563460.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis DS5]
 gi|256961536|ref|ZP_05565707.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           Merz96]
 gi|256964752|ref|ZP_05568923.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           HIP11704]
 gi|257084823|ref|ZP_05579184.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           Fly1]
 gi|257419656|ref|ZP_05596650.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           T11]
 gi|257422236|ref|ZP_05599226.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           X98]
 gi|293384705|ref|ZP_06630560.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           R712]
 gi|293387405|ref|ZP_06631960.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           S613]
 gi|300860295|ref|ZP_07106382.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TUSoD Ef11]
 gi|307287879|ref|ZP_07567912.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0109]
 gi|307295908|ref|ZP_07575740.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0411]
 gi|312900877|ref|ZP_07760171.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0470]
 gi|312908309|ref|ZP_07767273.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|312910617|ref|ZP_07769459.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           DAPTO 516]
 gi|227073247|gb|EEI11210.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0104]
 gi|227175396|gb|EEI56368.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           HH22]
 gi|229305165|gb|EEN71161.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis ATCC
           29200]
 gi|229309357|gb|EEN75344.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1322]
 gi|255963401|gb|EET95877.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T1]
 gi|256711949|gb|EEU26987.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis T8]
 gi|256949785|gb|EEU66417.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis DS5]
 gi|256952032|gb|EEU68664.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           Merz96]
 gi|256955248|gb|EEU71880.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           HIP11704]
 gi|256992853|gb|EEU80155.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           Fly1]
 gi|257161484|gb|EEU91444.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           T11]
 gi|257164060|gb|EEU94020.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           X98]
 gi|291078012|gb|EFE15376.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           R712]
 gi|291083196|gb|EFE20159.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           S613]
 gi|295113240|emb|CBL31877.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Enterococcus sp. 7L76]
 gi|300849334|gb|EFK77084.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TUSoD Ef11]
 gi|306496239|gb|EFM65818.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0411]
 gi|306501024|gb|EFM70331.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0109]
 gi|310625723|gb|EFQ09006.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           DAPTO 512]
 gi|311289165|gb|EFQ67721.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           DAPTO 516]
 gi|311291976|gb|EFQ70532.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0470]
 gi|315028902|gb|EFT40834.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX4000]
 gi|315033293|gb|EFT45225.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0017]
 gi|315034531|gb|EFT46463.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0027]
 gi|315143406|gb|EFT87422.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX2141]
 gi|315147639|gb|EFT91655.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX4244]
 gi|315149225|gb|EFT93241.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0012]
 gi|315157275|gb|EFU01292.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0043]
 gi|315159890|gb|EFU03907.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0312]
 gi|315161372|gb|EFU05389.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0645]
 gi|315163669|gb|EFU07686.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1302]
 gi|315167499|gb|EFU11516.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1341]
 gi|315169385|gb|EFU13402.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1342]
 gi|315174317|gb|EFU18334.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX1346]
 gi|315574553|gb|EFU86744.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0309B]
 gi|315581805|gb|EFU93996.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0309A]
 gi|323481111|gb|ADX80550.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis 62]
 gi|327535491|gb|AEA94325.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           OG1RF]
          Length = 315

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|167825880|ref|ZP_02457351.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           9]
 gi|167895951|ref|ZP_02483353.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           7894]
 gi|167912596|ref|ZP_02499687.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           112]
 gi|167920549|ref|ZP_02507640.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           BCC215]
          Length = 300

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D   S      +G FD++V+N
Sbjct: 212 ---RADVTYSLPDDCPDGEFDIVVAN 234


>gi|326405686|gb|ADZ62757.1| ribosomal protein L11 methyltransferase [Lactococcus lactis subsp.
           lactis CV56]
          Length = 317

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    DI   A+ +A  N   N   E+     +
Sbjct: 170 RGGETLLDVGTGSGVLSVA-ASYLGASEIFAYDIDEVAVRVALENIQLNPGHEKIHVSAN 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    ++   DVIV+N                      ++             + +   R
Sbjct: 229 NLLEGIDKKADVIVAN---------------------ILA--------DILVLMTEDAFR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            + ++G   +  I  ++   V+   E    FL
Sbjct: 260 LVKEEGYLIMSGIIADKADIVIASAEKAGFFL 291


>gi|15675331|ref|NP_269505.1| hypothetical protein SPy_1411 [Streptococcus pyogenes M1 GAS]
 gi|71910963|ref|YP_282513.1| methyltransferase [Streptococcus pyogenes MGAS5005]
 gi|13622512|gb|AAK34226.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
 gi|71853745|gb|AAZ51768.1| methyltransferase [Streptococcus pyogenes MGAS5005]
          Length = 258

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQERLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 90  QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 150 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 195


>gi|30260224|ref|NP_842601.1| hypothetical protein BA_0031 [Bacillus anthracis str. Ames]
 gi|47525287|ref|YP_016636.1| hypothetical protein GBAA_0031 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183068|ref|YP_026320.1| hypothetical protein BAS0033 [Bacillus anthracis str. Sterne]
 gi|65317494|ref|ZP_00390453.1| COG4123: Predicted O-methyltransferase [Bacillus anthracis str.
           A2012]
 gi|165872575|ref|ZP_02217207.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635021|ref|ZP_02393338.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167641507|ref|ZP_02399755.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170688922|ref|ZP_02880124.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170707496|ref|ZP_02897949.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177655340|ref|ZP_02936869.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190568984|ref|ZP_03021885.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227812707|ref|YP_002812716.1| hypothetical protein BAMEG_0043 [Bacillus anthracis str. CDC 684]
 gi|229602312|ref|YP_002864685.1| hypothetical protein BAA_0043 [Bacillus anthracis str. A0248]
 gi|254724175|ref|ZP_05185960.1| hypothetical protein BantA1_17168 [Bacillus anthracis str. A1055]
 gi|254733570|ref|ZP_05191291.1| hypothetical protein BantWNA_00195 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744662|ref|ZP_05202341.1| hypothetical protein BantKB_27290 [Bacillus anthracis str. Kruger
           B]
 gi|254756367|ref|ZP_05208396.1| hypothetical protein BantV_28212 [Bacillus anthracis str. Vollum]
 gi|254762423|ref|ZP_05214265.1| hypothetical protein BantA9_28426 [Bacillus anthracis str.
           Australia 94]
 gi|30253545|gb|AAP24087.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47500435|gb|AAT29111.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49176995|gb|AAT52371.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|164711703|gb|EDR17248.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167510492|gb|EDR85890.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167529495|gb|EDR92245.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170127492|gb|EDS96366.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170667146|gb|EDT17907.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172080181|gb|EDT65274.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190559908|gb|EDV13892.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227006756|gb|ACP16499.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229266720|gb|ACQ48357.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
          Length = 246

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
            +        ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PVTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|260891098|ref|ZP_05902361.1| putative methyltransferase [Leptotrichia hofstadii F0254]
 gi|260859125|gb|EEX73625.1| putative methyltransferase [Leptotrichia hofstadii F0254]
          Length = 236

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 19/180 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           E  LL+ + L     +  K    R   IL++G G G + L + +     + + V++    
Sbjct: 40  EDALLLSNFLRKYFSKKNKNSKTRKSVILEIGAGQGIMSLLISEIDMVERIIAVEVQKDV 99

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD---- 189
            E  + N   N + ++   L  +   ++EG ++ I SNPPY + V    L   V +    
Sbjct: 100 YETLEKNIEINNLRQKITPLNENI-KNIEGKYEFIFSNPPY-KKVNAGKLPDNVTERISK 157

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           ++  ++L            +   + R L+  G   V +  ++  DV R   +  + +++ 
Sbjct: 158 YEILLTL----------EELFREIRRLLSNYGEFFVIVPNSRLNDVFRYIYANNMNIISI 207


>gi|154506231|ref|ZP_02042969.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149]
 gi|153793730|gb|EDN76150.1| hypothetical protein RUMGNA_03773 [Ruminococcus gnavus ATCC 29149]
          Length = 559

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           I G   FY    N+   ++    F+P      ++    +     I   + + + DL +GT
Sbjct: 265 IYGQDYFYEKLLNLEFKITPFSFFQPNSRGAEVL---YSTVRDYIGDINDMTVFDLFSGT 321

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P   + +GV+I  +A+E AK NA  NG+S     +  D F     +E  
Sbjct: 322 GTIAQVLA---PVAKQVIGVEIIEEAVEAAKENAAHNGLS-NCKFIAGDVFKVLDEIEEK 377

Query: 165 FDVIVSNPP 173
            DVIV +PP
Sbjct: 378 PDVIVLDPP 386


>gi|109896776|ref|YP_660031.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudoalteromonas atlantica
           T6c]
 gi|122972352|sp|Q15YR1|RLMG_PSEA6 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|109699057|gb|ABG38977.1| 23S rRNA m(2)G-1835 methyltransferase [Pseudoalteromonas atlantica
           T6c]
          Length = 384

 Score = 65.1 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 22/142 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +   +   I+DLG G G + L +L +SP    + VD S  A+  AK N  
Sbjct: 219 DIGARVLLAHLPDANHKCIVDLGCGNGVLGLHVLHKSPGAHVIFVDESFMAIASAKMNIE 278

Query: 143 TNGVS--ERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            N     ++   + S+           E   D+++ NPP+ +   +             I
Sbjct: 279 QNMPDKLDQCKFIVSNCLDECLSSGENEATVDIVLCNPPFHQQNTITD----------HI 328

Query: 195 SLDGGIDGLSHYRTIADGVSRH 216
           +L    D     + I       
Sbjct: 329 ALQMFKDS----KRILKHAGEL 346


>gi|325570848|ref|ZP_08146531.1| methyltransferase [Enterococcus casseliflavus ATCC 12755]
 gi|325156358|gb|EGC68540.1| methyltransferase [Enterococcus casseliflavus ATCC 12755]
          Length = 244

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 27/197 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  SS+ F    +  LL + A      R+ KR V  I+DL  G GAV L + +++  
Sbjct: 15  DIKIIQSSEVFSFSLDAVLLANYA------RVPKRGV--IVDLCAGNGAVGLFISRKT-T 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSV-EGLFDVIVSNPPY--- 174
                V++  +  ++A+ +   N + E+      D    F  +     D++V NPPY   
Sbjct: 66  AHIYQVELQERLADMAQRSIELNDLQEQLTVYPMDLKNLFQKIKPDSVDLLVCNPPYFKN 125

Query: 175 IESVIVDCLG-LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           I + I +    L +   +   +LD           +    S+ L  +G  ++    ++ +
Sbjct: 126 IPTAIKNPNPYLAIARHEITTNLD----------EVIQTASKALKMNGRFAMVHRPDRFL 175

Query: 234 DVVRIFESRKLFLVNAF 250
           D++    + ++      
Sbjct: 176 DILDHMRTHRIAPKRVR 192


>gi|220673234|emb|CAX12680.1| novel protein similar to vertebrate trimethylguanosine synthase
           homolog (S. cerevisiae) (TGS1) [Danio rerio]
          Length = 180

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 16/173 (9%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   +L   +  +   I+D   G G   +         + +G+DI    L +A+ NA   
Sbjct: 11  AEHIALRVQDCFNTELIIDAFCGVGGNAIQFALTGK--RVIGIDIDPVRLALAQHNAAVY 68

Query: 145 GVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV +R D LQ D+   +     D++  +PP+      + L  +V +    ++     DG 
Sbjct: 69  GVEQRIDFLQGDFLQLAPHLRGDMVFLSPPW---GGPEYLTADVFNIQTMMT----PDGF 121

Query: 204 SHYRT---IADGVSRHLNKDG---LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             +R    I+D +   L ++      +   G   KV+V + F + KL  + A+
Sbjct: 122 EIFRLSKMISDNIVYFLPRNADMEQIASLAGPGGKVEVEQNFLNNKLKTITAY 174


>gi|205374145|ref|ZP_03226945.1| ribosomal protein L11 methyltransferase [Bacillus coahuilensis
           m4-4]
          Length = 316

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 60/219 (27%), Gaps = 56/219 (25%)

Query: 55  LGWRDFYNV-----RLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+      R T+      +EP    EL+++              + +       
Sbjct: 112 TAWKKYYHPVKISERFTIVPTWENYEPVSSDELIIELDPGMAFGTGTHPTTVMCIQALER 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A            +D+   A++ AK N   N         
Sbjct: 172 TITSGTTVMDVGTGSGVLSIAAAL-LGATHVEALDLDEVAVQSAKENIRLNDCETIVSVT 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           Q++       L DV+V N                      ++                  
Sbjct: 231 QNNLVEGKTELVDVMVGN---------------------LLA--------EIIARFPKEA 261

Query: 214 SRHLNKDGLCS---VEIGYNQKVDVVRIFESRKLFLVNA 249
              +   G      +  G  Q   V  + E     +   
Sbjct: 262 FNLVKPGGYYITSGIIKGKKQF--VRELLEEAGFVIEEV 298


>gi|168575039|ref|ZP_02721002.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           MLV-016]
 gi|183578852|gb|EDT99380.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           MLV-016]
 gi|332199793|gb|EGJ13868.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA41317]
          Length = 316

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V  + ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRELAESAGFFL 290


>gi|229085534|ref|ZP_04217770.1| Methyltransferase type 11 [Bacillus cereus Rock3-44]
 gi|228697755|gb|EEL50504.1| Methyltransferase type 11 [Bacillus cereus Rock3-44]
          Length = 260

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 70/208 (33%), Gaps = 41/208 (19%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   LS   ++                + ++      +ILD+GTG+G++ + L K 
Sbjct: 52  PFIYITFILSYSVYQFAAFGGNYQSKIHDLIVAKVNWDGEGKILDIGTGSGSLIIKLAKT 111

Query: 119 SPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIV 169
            P     G        + S       + NA   GV  R D L++        +  FD+IV
Sbjct: 112 FPKSYLTGIDYWGGNWEYSK---AQCQQNAEIEGVFNRIDFLKASATELPFTDDEFDIIV 168

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---- 225
           S   +           EV+D + +I              +     R L   G        
Sbjct: 169 SCLTF----------HEVKDSENKI-------------EVIKEALRVLKPGGKFIFLDLF 205

Query: 226 --EIGYNQKVDVVRIFESRKLFLVNAFK 251
             E  +  + +++ + +   +  +N +K
Sbjct: 206 MDEKIFGDEKELLNVLKKHGVSELNGYK 233


>gi|148997825|ref|ZP_01825389.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP11-BS70]
 gi|307068393|ref|YP_003877359.1| hypothetical protein SPAP_1773 [Streptococcus pneumoniae AP200]
 gi|147756324|gb|EDK63366.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP11-BS70]
 gi|306409930|gb|ADM85357.1| hypothetical protein SPAP_1773 [Streptococcus pneumoniae AP200]
          Length = 316

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGILSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V  + ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRELAESAGFFL 290


>gi|306843236|ref|ZP_07475846.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2]
 gi|306286559|gb|EFM58138.1| ribosomal protein L11 methyltransferase [Brucella sp. BO2]
          Length = 285

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQAQGLTHQKTL 274


>gi|146302850|ref|YP_001190166.1| putative methylase [Metallosphaera sedula DSM 5348]
 gi|145701100|gb|ABP94242.1| putative methylase [Metallosphaera sedula DSM 5348]
          Length = 199

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R++G   F   +L ++ + +EP  ++E+L           ++ +   +++D+G+G+G + 
Sbjct: 5   RVIG---FGGYKLCVNEEVYEPAEDSEILA--------SILDVKPGEKVIDVGSGSGILG 53

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSN 171
           +           + +D++  A E    ++  N V    + +  D  + + G   D ++ N
Sbjct: 54  IV--AGRMGASVISIDVNPYATEATLCSSKLNHV--NIEVINCDSVTCLRGFRVDALIFN 109

Query: 172 PPYIESVI 179
           PPY+    
Sbjct: 110 PPYLPVEE 117


>gi|91773405|ref|YP_566097.1| methyltransferase [Methanococcoides burtonii DSM 6242]
 gi|91712420|gb|ABE52347.1| RNA methyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 203

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
                 T E  P   LL    L F+  + +      + DLG GTG + +         K 
Sbjct: 16  FENPDITLEQYPTPALLAAEMLHFAFMKGDLEGT--VYDLGCGTGMLAIGAAMLGAE-KV 72

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           VG D    AL+IA+ NA   GV   F+         V G  D +V NPP+
Sbjct: 73  VGFDSDSGALDIARENAEIFGVDVEFECKDI---RQVRGHADTVVMNPPF 119


>gi|332187210|ref|ZP_08388949.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Sphingomonas sp. S17]
 gi|332012631|gb|EGI54697.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Sphingomonas sp. S17]
          Length = 409

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 26/139 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +  +++LD+G G G + L L  +    + +GV +S + L++A+  A   GV
Sbjct: 167 AHIAAKLAIQPGMKVLDIGCGWGGMALYL-HQMCGAEVLGVTLSEEQLKVARQRAEALGV 225

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +++      D +  VEG FD IVS                V  F+      G       Y
Sbjct: 226 ADKVKFELID-YRRVEGKFDRIVS----------------VGMFE----HVGPPQ----Y 260

Query: 207 RTIADGVSRHLNKDGLCSV 225
           RT        L +DG+  +
Sbjct: 261 RTFFRKCRDLLTEDGVMLL 279


>gi|315179199|gb|ADT86113.1| 16S RNA G1207 methylase RsmC [Vibrio furnissii NCTC 11218]
          Length = 340

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 61/171 (35%), Gaps = 37/171 (21%)

Query: 60  FYNVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +++  LT+      F   E    + LL+D     +LP ++     ++LD G G G +   
Sbjct: 167 YHHHTLTVRSLPGVFSHGEFDMGSRLLLD-----TLPPLQG----KVLDFGCGAGVLGGV 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +    P       DIS  A+  ++     NG+S R     SD +S     +  IV+NPP+
Sbjct: 218 MAMLYPNIALEMCDISALAIRSSQETLAANGLSGRVFA--SDVYSDTASDYQFIVTNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +       E                     T+      HL + G   V
Sbjct: 276 HAGLDTSYNATE---------------------TLLAKAPAHLQRQGQLVV 305


>gi|49479032|ref|YP_034388.1| methyltransferase [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|52145181|ref|YP_081647.1| methyltransferase [Bacillus cereus E33L]
 gi|196036384|ref|ZP_03103781.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196041769|ref|ZP_03109059.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|218901235|ref|YP_002449069.1| hypothetical protein BCAH820_0039 [Bacillus cereus AH820]
 gi|228912774|ref|ZP_04076422.1| hypothetical protein bthur0012_240 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228925288|ref|ZP_04088385.1| hypothetical protein bthur0010_230 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931537|ref|ZP_04094444.1| hypothetical protein bthur0009_310 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228943841|ref|ZP_04106227.1| hypothetical protein bthur0007_230 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229089167|ref|ZP_04220449.1| hypothetical protein bcere0021_230 [Bacillus cereus Rock3-42]
 gi|229119697|ref|ZP_04248959.1| hypothetical protein bcere0016_230 [Bacillus cereus 95/8201]
 gi|301051770|ref|YP_003789981.1| hypothetical protein BACI_c00410 [Bacillus anthracis CI]
 gi|49330588|gb|AAT61234.1| conserved hypothetical protein, possible methyltransferase
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|51978650|gb|AAU20200.1| conserved hypothetical protein; possible methyltransferase
           [Bacillus cereus E33L]
 gi|195991014|gb|EDX54985.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196027389|gb|EDX66006.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|218538837|gb|ACK91235.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|228663722|gb|EEL19300.1| hypothetical protein bcere0016_230 [Bacillus cereus 95/8201]
 gi|228694130|gb|EEL47811.1| hypothetical protein bcere0021_230 [Bacillus cereus Rock3-42]
 gi|228815798|gb|EEM62033.1| hypothetical protein bthur0007_230 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228828089|gb|EEM73816.1| hypothetical protein bthur0009_310 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834335|gb|EEM79875.1| hypothetical protein bthur0010_230 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228846834|gb|EEM91838.1| hypothetical protein bthur0012_240 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300373939|gb|ADK02843.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 246

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|332976354|gb|EGK13209.1| methyltransferase [Psychrobacter sp. 1501(2011)]
          Length = 202

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTF-EPRPETELL-------VDSALAFSLPRIEKRD 97
           + H     +L     +   +  + D    P   +          +D+     L  ++ + 
Sbjct: 1   MTHTPPADLLEKAKHWRNDIAFTQDVLGTPMHFSTTWGIFSPEKLDAGSLMLLDHVDFQV 60

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
               +DLG G G + +   +E P  +   +D    A+E A+ N   NG++   D   S+ 
Sbjct: 61  DDDSIDLGCGYGVLGMTAARECPQGQHTLIDKDFMAVEYARRNCEKNGLT-NVDVHLSNG 119

Query: 158 FSSVEGLFDV--IVSNPPYIESVIVDCL 183
           F+ V+   D   ++SN P         L
Sbjct: 120 FNHVDPNKDFSLVMSNLPAKVGKEQHYL 147


>gi|315051272|ref|XP_003175010.1| DUF890 domain-containing protein [Arthroderma gypseum CBS 118893]
 gi|311340325|gb|EFQ99527.1| DUF890 domain-containing protein [Arthroderma gypseum CBS 118893]
          Length = 432

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 8/101 (7%)

Query: 102 LDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LD+GTG+  +  L        +  V  DI  K L+ A+ N   N +  R   + S     
Sbjct: 104 LDIGTGSSCIYPLLGTVHRKRWTFVATDIDEKNLQHARENVRRNHLQSRIQVVDSTPDGP 163

Query: 161 V-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           +         + D  + NPP+ ES        E ++ +P  
Sbjct: 164 LIPLDRIQRKMLDFTMCNPPFYESHEEMLQLAEEKEHEPLS 204


>gi|196010802|ref|XP_002115265.1| hypothetical protein TRIADDRAFT_59271 [Trichoplax adhaerens]
 gi|190582036|gb|EDV22110.1| hypothetical protein TRIADDRAFT_59271 [Trichoplax adhaerens]
          Length = 556

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + DF  ++  +S  +F    +   L    L          +    +LD+  GTG + + +
Sbjct: 361 YEDFLGMKFRISPSSFF---QGNTLAAEVLYRNIRDWCPTKATTVVLDICCGTGTIGILM 417

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            K     + +G+++   A+E A+ NA  N +    + +       +  L D +
Sbjct: 418 AKNVN--RVIGIEMVEDAIEDARVNAELNDIK-NIEFICGKAEDKLPTLVDNL 467


>gi|116492885|ref|YP_804620.1| ribosomal protein L11 methyltransferase [Pediococcus pentosaceus
           ATCC 25745]
 gi|122265651|sp|Q03F44|PRMA_PEDPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116103035|gb|ABJ68178.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Pediococcus pentosaceus ATCC 25745]
          Length = 316

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 38/188 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   AL  ++     R    + D+GTG+G + +A  K          D+   A+  
Sbjct: 161 PTTRLCLQALEMTM-----RGGETLYDVGTGSGVLSIA-AKHLGASDVEAFDVDDIAVAA 214

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+ N   N +++      +D    +    D IV+N      ++ D L             
Sbjct: 215 AQENFDLNPIAKDIKVSANDLLKGINRPVDTIVAN------ILSDILVP----------- 257

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
                       +     + LN +G   +  I  ++   V+    +    +        G
Sbjct: 258 ------------LIPQAKQLLNSNGYFILSGIIDDKLELVIDTLIANDFKIEEVLH--YG 303

Query: 256 NDRVLLFC 263
             R ++  
Sbjct: 304 EWRGVIAT 311


>gi|257084336|ref|ZP_05578697.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
 gi|256992366|gb|EEU79668.1| conserved hypothetical protein [Enterococcus faecalis Fly1]
          Length = 244

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K   +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AKIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLEQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|156975686|ref|YP_001446593.1| 16S rRNA m2G 1207 methyltransferase [Vibrio harveyi ATCC BAA-1116]
 gi|226713152|sp|A7MUT5|RSMC_VIBHB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|156527280|gb|ABU72366.1| hypothetical protein VIBHAR_03421 [Vibrio harveyi ATCC BAA-1116]
          Length = 341

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP++      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPKLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG+S R     SD +S     +  IVSNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTAKDYRFIVSNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +++  +G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGQAPKYMTANGEMII 305


>gi|153835389|ref|ZP_01988056.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
           HY01]
 gi|148868091|gb|EDL67260.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio harveyi
           HY01]
          Length = 341

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP++      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPKLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG+S R     SD +S     +  IVSNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTAKDYRFIVSNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +++  +G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGQAPKYMTANGEMII 305


>gi|257090257|ref|ZP_05584618.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           CH188]
 gi|312902755|ref|ZP_07761959.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0635]
 gi|256999069|gb|EEU85589.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecalis
           CH188]
 gi|310633809|gb|EFQ17092.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0635]
 gi|315576686|gb|EFU88877.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0630]
          Length = 315

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVAVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|238796727|ref|ZP_04640233.1| Methyltransferase small [Yersinia mollaretii ATCC 43969]
 gi|238719458|gb|EEQ11268.1| Methyltransferase small [Yersinia mollaretii ATCC 43969]
          Length = 248

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + +  S      GV++  +A + A SNA  +  + R 
Sbjct: 42  WVPVEKARKVLDIGCGSGLIALMIAQRSSSEVLIDGVELEPEAAQQASSNAALSPWAARV 101

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 102 RIYAQDVHQFAENHPHQYDLIVSNPPYFSPAVACR--DEARD-------TARYTGSLTHD 152

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            +     + + +DGL  V +  +  V++  +   +  F V      +D  G    R+LL
Sbjct: 153 ALLRCAEKLITEDGLFCVVLPQDLGVELAGLAVQQNWF-VRCQVDIRDRPGKPLHRMLL 210


>gi|242399935|ref|YP_002995360.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus
           MM 739]
 gi|242266329|gb|ACS91011.1| Predicted N6-adenine-specific DNA methylase [Thermococcus sibiricus
           MM 739]
          Length = 365

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 24/165 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A ++  + + D   +LD   G+G + + L       K +G++   K L+ A  NA+  G
Sbjct: 206 IANAMIELAELDEGSVLDPMCGSGTILIELALRGYEGKIIGIEKYKKHLKGAMMNALAAG 265

Query: 146 VSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V ++ D +Q D    S      D ++SN PY   +    L  E                 
Sbjct: 266 VLDKIDLIQGDATRLSHYLDSVDFVISNLPYGLKIGKKKLIPE----------------- 308

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             Y      +S+ L K G+        +K  + + FE     +++
Sbjct: 309 -LYMKFFAELSKILGKRGVFL----TTEKKAIEKAFEENGFKIIH 348


>gi|194751718|ref|XP_001958172.1| GF10790 [Drosophila ananassae]
 gi|190625454|gb|EDV40978.1| GF10790 [Drosophila ananassae]
          Length = 613

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 56/161 (34%), Gaps = 29/161 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA--------------IVRSLKHE---SIHR 53
           L  V G+ S  + +     L    + F  N               +      +    +  
Sbjct: 300 LMLVAGIYSSNLDLSEQRELKKELKTFYENCENEPFKCTSLYYQDVKHREAGQMVNPVEH 359

Query: 54  ILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           ILG          ++  +S   F         LL   A+    P  +      +LD+  G
Sbjct: 360 ILGTTHITDTIQGLKFRISPLAFFQINTESANLLYQKAIDLVGPTKD----TTLLDICCG 415

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           TG + L+  K     K +GV+I   A+  A+ NA+ NG++ 
Sbjct: 416 TGTITLSFAKHCR--KVMGVEIVPDAIRDAEFNAMVNGITN 454


>gi|119775873|ref|YP_928613.1| hypothetical protein Sama_2741 [Shewanella amazonensis SB2B]
 gi|119768373|gb|ABM00944.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 247

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 15/165 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +   ++  D   +LDLG G+G + L +  +        ++I   A    +SN  
Sbjct: 36  DAVLLGAWANLDGADA--VLDLGAGSGLLAL-MAAQRCKAPITAIEIDPVAASACRSNFS 92

Query: 143 TNGVSERFDTLQSDW--FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +   +R + +++D     ++ G  F  I+ NPPY E+  +           P  +    
Sbjct: 93  ASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLSE--------KPGRAQARH 144

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L     +   ++ HL+ +G+ S+ +    +    +      L
Sbjct: 145 TGSLGFL-ALCKLITTHLSTEGIASLVLPVESEQAFRQALTHLGL 188


>gi|271501629|ref|YP_003334655.1| methyltransferase small domain-containing protein [Dickeya dadantii
           Ech586]
 gi|270345184|gb|ACZ77949.1| methyltransferase small domain protein [Dickeya dadantii Ech586]
          Length = 253

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 19/182 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
                   RILD+G G+G + L L + S       GV++   A   A  N   +   +  
Sbjct: 41  WTPLHQETRILDIGCGSGLLTLMLAQRSGGLVPIDGVELDAAASAQAADNVALSPWVDAI 100

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
              Q+D  +        + +IVSNPPY    V           +   ++ D         
Sbjct: 101 RIYQADILAYARDTASRYSLIVSNPPYFSPGVDCASTQRAQARYTTTLTHDA-------- 152

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF-LVNA-FKDYGGND--RVLLF 262
             + D  SR L  +G   V +  +   D + + +       +     D       RVLL 
Sbjct: 153 --LLDCASRLLEPEGRFCVVLPVSGAEDFLTLAQQSAWRADIRVDVADSASRPVNRVLLS 210

Query: 263 CR 264
            R
Sbjct: 211 LR 212


>gi|195127973|ref|XP_002008441.1| GI11815 [Drosophila mojavensis]
 gi|193920050|gb|EDW18917.1| GI11815 [Drosophila mojavensis]
          Length = 597

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 15/136 (11%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHE---SIHRILGWRDF----YNVRLTLSSDTF-- 72
               P+     +        +      +    +  + G          ++  +S   F  
Sbjct: 328 FYEQPEQNETHKCTSLYYQDVKHREAGQMVNPVTHLSGSTHITDTIQGLQFRISPLAFFQ 387

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
                 ++L   A+  + P  E      +LD+  GTG + LA  K     + +GV+I   
Sbjct: 388 INTAGADVLYQQAIDLAAPNQE----TIMLDICCGTGTIALAFAKHCK--QVLGVEIVPD 441

Query: 133 ALEIAKSNAVTNGVSE 148
           A++ A+ NA TNG+  
Sbjct: 442 AIKDAEHNAETNGIKN 457


>gi|220914767|ref|YP_002490075.1| methyltransferase small [Methylobacterium nodulans ORS 2060]
 gi|219952518|gb|ACL62908.1| methyltransferase small [Methylobacterium nodulans ORS 2060]
          Length = 299

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 55/159 (34%), Gaps = 26/159 (16%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG+G + L LL+          D+S  A+ +A  N   N  S R      D F 
Sbjct: 81  RLLDLGTGSGILAL-LLRSLGAHDITASDVSTSAVGLALENESLNFRSSRIRFFSGDLFV 139

Query: 160 SVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-----------GLSHY 206
            +     +D ++ NPP   +     L            L G  D           G    
Sbjct: 140 GLPEGDRYDTVIFNPPGWRTPSEKLLDR----------LRGNEDGIGMTPETMFYGDELL 189

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
                 +   +N+ G   V  G N  V +  +    K F
Sbjct: 190 LRFLKDLPDRMNRTGRAIV--GLNSLVGIRDVLARYKAF 226


>gi|254190971|ref|ZP_04897477.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|157938645|gb|EDO94315.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 302

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 156 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 213

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 214 ---RADVTYGLPDDCPDGEFDIVVAN 236


>gi|319946887|ref|ZP_08021121.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           australis ATCC 700641]
 gi|319746935|gb|EFV99194.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           australis ATCC 700641]
          Length = 187

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A S+ +++     R+LD+G+GTG+V +      P  + V ++ +  A+ + + N  
Sbjct: 16  EEVRAISIDKLDLHKAKRMLDVGSGTGSVTIQAAVSFPNLEVVAIEQNEDAVALTQENID 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVI 168
             G       ++      +EG FD I
Sbjct: 76  YFGCQ-NITLIKGKAPVELEGQFDAI 100


>gi|307102795|gb|EFN51062.1| hypothetical protein CHLNCDRAFT_59324 [Chlorella variabilis]
          Length = 372

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 15/187 (8%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF---- 121
           T   + +EP  ++  LVD ALA       ++     L++G+G+G V  +L          
Sbjct: 9   TFHREVYEPAEDSFALVD-ALAAHREAWRQQPPRMCLEVGSGSGYVITSLALLLQQLGVA 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESV 178
            + +  DI+ +A     +    + V  R D +  D       VEGL DV+V NPPY+ + 
Sbjct: 68  AQLLATDINQQAAAATAATLAAHQVR-RADIVVCDLASALPPVEGLVDVLVFNPPYVPTP 126

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDVVR 237
                  EV       +  GG  G      +   V   L+  G +  V +  NQ  +++R
Sbjct: 127 D-----EEVSRGGLAAAWAGGACGRRVIDRLLPLVPCLLSAQGEMFMVAVHENQPEELMR 181

Query: 238 IFESRKL 244
             E+  L
Sbjct: 182 QMEAAGL 188


>gi|304437642|ref|ZP_07397595.1| methyltransferase domain protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369350|gb|EFM23022.1| methyltransferase domain protein [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 258

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 37/184 (20%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL----EI 136
           L+    ++ L  +      R+L++G G+GA+ +A  K  P     G+D            
Sbjct: 73  LMRRIHSYLLDHLPWDGRGRVLEVGCGSGALSIAAAKRFPLAAVQGIDYWPPMWNYGQAQ 132

Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            ++NA   GV++R      D       +  FD +VSN  +           EVR    + 
Sbjct: 133 CETNAAAEGVADRCTFQHGDAAKLDFPDNHFDAVVSNFVF----------HEVRTQKDKF 182

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-------YNQKVDVVRIFESRKLFLV 247
                         + +   R L K G  ++          Y    + V   +   +  V
Sbjct: 183 -------------MLVEEALRVLKKGGAFAL-HDTYGNKDMYGSMDEFVACLKQHGIADV 228

Query: 248 NAFK 251
           +   
Sbjct: 229 SYLP 232


>gi|237813872|ref|YP_002898323.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           MSHR346]
 gi|237503463|gb|ACQ95781.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           MSHR346]
          Length = 302

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  G+DI  +A+E A+ N+  N 
Sbjct: 156 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGIDIDPQAVEAARHNSERN- 213

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D   S      +G FD++V+N
Sbjct: 214 ---RADVTYSLPDDCPDGEFDIVVAN 236


>gi|332706167|ref|ZP_08426236.1| methyltransferase domain protein [Lyngbya majuscula 3L]
 gi|332355004|gb|EGJ34475.1| methyltransferase domain protein [Lyngbya majuscula 3L]
          Length = 404

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 29/142 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F      +R+ +RILD G GTG     L+  +P    VG+D+S  AL++A+     
Sbjct: 41  AAYSFCTGHTPQREEIRILDAGCGTGVGTEYLVHLNPQASVVGIDLSAGALKVAQERCRR 100

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G ++R +      +    +EG FD+I                + V    P         
Sbjct: 101 SG-ADRVEFHHLSLYDVDQIEGQFDLINC--------------VGVLHHLP--------- 136

Query: 202 GLSHYRTIADGVSRHLNKDGLC 223
                R I   +++ L   GL 
Sbjct: 137 --DPIRGI-QSIAKKLAPGGLF 155


>gi|167721287|ref|ZP_02404523.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           DM98]
          Length = 300

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|312869028|ref|ZP_07729205.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
 gi|311095454|gb|EFQ53721.1| conserved hypothetical protein [Lactobacillus oris PB013-T2-3]
          Length = 253

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 25/191 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VRL  S + F    +  LL D        R  +R  +R +DL  G  A+ L L  +   
Sbjct: 21  DVRLIQSPNCFAFSLDAVLLADFV------RPNQRQRLRTVDLCAGNAAIGLFLHDKLGG 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + + V++  +  ++A+ +   NG++ER+  L  D         +   DV++ NPPY   
Sbjct: 75  -QFIEVELQPRIADMARRSIELNGLAERYQVLNLDIADVFSVIPKDSADVVLCNPPYFPV 133

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   + + +L           T+A  +S  L  +G   +    ++  
Sbjct: 134 TAKSQKNPNQYLAIARHELKTNLV----------TVAQQMSGLLKMNGHGYLVHRPDRLT 183

Query: 234 DVVRIFESRKL 244
           +++ + +  +L
Sbjct: 184 EILTVLQQNRL 194


>gi|332358375|gb|EGJ36200.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK49]
          Length = 318

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVETEADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|85714686|ref|ZP_01045673.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
 gi|85698571|gb|EAQ36441.1| Ribosomal L11 methyltransferase [Nitrobacter sp. Nb-311A]
          Length = 298

 Score = 65.1 bits (158), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 40/176 (22%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       RILDLG GTG + +A  K S     +  DI  ++  +A+ 
Sbjct: 146 LLLDQVLRGKMPR-------RILDLGAGTGVLAIAAAKASRR-NVLASDIDPRSAAVARE 197

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           NA +NGV     ++++  FS+        FD++++N           L   +R   P ++
Sbjct: 198 NAASNGVGNLVQSIRATGFSAPPFRTRAPFDLVLAN----------ILANPLRQMAPAMA 247

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                      R +A      L+  GL        Q   V+  + ++ L L+   +
Sbjct: 248 -----------RHLAPEAMVILS--GLL-----PQQTRGVIAAYRAQGLVLIRQIR 285


>gi|330804139|ref|XP_003290056.1| hypothetical protein DICPUDRAFT_80806 [Dictyostelium purpureum]
 gi|325079856|gb|EGC33437.1| hypothetical protein DICPUDRAFT_80806 [Dictyostelium purpureum]
          Length = 240

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 22/194 (11%)

Query: 59  DFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           D     L L  + F P+  PE+        A +L     +     L++G G+G    +L 
Sbjct: 37  DMDGKILRLHPNVFSPKHFPESR-----WYASTLANKIVKKGESFLEIGAGSGI--SSLY 89

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPY 174
                     VDI+  A+EI K N   N +       QSD ++S+     +  I  N P+
Sbjct: 90  VSEIGANVTSVDINPDAVEITKLNFKLNKLESNV--FQSDIYNSLPNGSKYKYIFWNHPW 147

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKV 233
              V  + +  E+R      +LD    G            ++L  DG   +    + +  
Sbjct: 148 --QVSNESVIQELRS---EKTLD---QGYILLTRYISESKKYLTDDGFLLLGTCNFAKIE 199

Query: 234 DVVRIFESRKLFLV 247
            +++I +     +V
Sbjct: 200 QIIQIADRLGYKIV 213


>gi|322807274|emb|CBZ04848.1| ribosomal protein L11 methyltransferase [Clostridium botulinum
           H04402 065]
          Length = 160

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 34/157 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   + D+G G+G + +A  K       +GVD+   A++ +K N   N + +  + L+ 
Sbjct: 23  KEDRTVFDIGCGSGILSIAAAKLGAK-HVIGVDLDPVAVKSSKENIKYNNL-DNIEILEG 80

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VEG  +++V+N           +  +V  F                  + +GV  
Sbjct: 81  NLMEVVEGRANIVVAN-----------IIADVIIF------------------LTEGVKA 111

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
            + K G       I    K DV++  E     +    
Sbjct: 112 FIEKGGYFIASGIINSR-KEDVIKKLEETGFIIEEVR 147


>gi|156089291|ref|XP_001612052.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154799306|gb|EDO08484.1| conserved hypothetical protein [Babesia bovis]
          Length = 461

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ++  L D A    L  I K + V++LD+GTG   +   +      +  +  DI   AL +
Sbjct: 169 DSSELKDDASNMKLQNILKGERVKVLDIGTGANCIYPLIGSAEYGWSFIATDIDINALML 228

Query: 137 AKSNAVTNGVSERFDT-LQSDWFSSVEGLF------DVIVSNPPYIESVIVDCLGLEV 187
           AK N   N +++  +  LQ D      G+        + + NPP+  S+    L   V
Sbjct: 229 AKQNIQLNNMAKTVELRLQKDTLRMFTGVLMPHEFVHLTMCNPPFHSSLDQANLNPRV 286


>gi|119190845|ref|XP_001246029.1| hypothetical protein CIMG_05470 [Coccidioides immitis RS]
          Length = 398

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 22/155 (14%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAK 138
           L+D+         +    V  LD+GTG   +   LA  +  P +  V  DI+ K  + A+
Sbjct: 48  LIDTTNDDYRGGYDPEREVIGLDIGTGASCIYPLLACAQ-RPKWMFVATDINDKNFQYAQ 106

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVI--------VSNPPYIESVIVDCLGLEVRDF 190
            N   N +  R   +++     +  L D +        + NPP+ ES         ++  
Sbjct: 107 ENVKRNNLQSRIRVVKTTAEDPLIALGDKVPFERLQFTMCNPPFYESEEEMLASASLKHR 166

Query: 191 DPRIS---------LDGGIDGLSHYRTIADGVSRH 216
            P  +           GG +  S  + I D   + 
Sbjct: 167 PPNSACTGAPVEMVTAGGEE--SFVQRIIDESLKL 199


>gi|1196945|gb|AAA88612.1| unknown protein [Salmonella enterica subsp. enterica serovar
          Typhimurium]
          Length = 77

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%)

Query: 3  ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
            RD+   L  VTG     ++   ++ L D Q+  L + + R  + E I  + G R+F
Sbjct: 20 PRRDAEILLEYVTGKGRTYIMAFGETPLTDVQQQQLADLLQRRKQGEPIAYLTGLREF 77


>gi|15646113|ref|NP_208295.1| hypothetical protein HP1504 [Helicobacter pylori 26695]
 gi|2314678|gb|AAD08540.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 238

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGILGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F+    D+   +  L+D+IV NPP Y    I  
Sbjct: 60  IVHLVEKDNKMAFCSQKNALKFPNAQVFEGDFLDFNPPI--LYDIIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++   V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLVAKVKKCLKPKGYFIF 150


>gi|85705712|ref|ZP_01036809.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217]
 gi|85669702|gb|EAQ24566.1| hypothetical protein ROS217_10442 [Roseovarius sp. 217]
          Length = 257

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 12/123 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL ++    +P+      VD  L      +  R    +LDLG G+G   L +    
Sbjct: 16  FLGGRLRIA----QPKTGYRAGVDPVL--LAASVPARAGQTLLDLGCGSGIAALCVAARV 69

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYI 175
           P     G++I      +A+ N+ TNG++   D  + D            FD ++ NPPY 
Sbjct: 70  PGVSLAGLEIQPAYAVLARRNSATNGLA--LDVTEGDIADLPAELRARQFDHVIVNPPYF 127

Query: 176 ESV 178
           +  
Sbjct: 128 DRD 130


>gi|294791587|ref|ZP_06756735.1| SAM-dependent methyltransferase [Veillonella sp. 6_1_27]
 gi|294456817|gb|EFG25179.1| SAM-dependent methyltransferase [Veillonella sp. 6_1_27]
          Length = 241

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 21/194 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   SD F    +   L+         R   R     +DLGTG+G + L +      
Sbjct: 14  GLQIYQRSDMFRFSFDAIALIH------FCRFNGRHTY--VDLGTGSGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGL-FDVIVSNPPYIE 176
               G++I+   +E+AK +   N   +  + L  D+    +  ++   FD ++ NPP+ +
Sbjct: 65  GHITGIEINETLVELAKRSVEHNRKQDVVNILCGDYRHMTYRDIQDKPFDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E R+    ++L  G   L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSEERN----LALHDGHTTLCD---VLKAVQSFIKYKGRFWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAF 250
              E          
Sbjct: 178 HELERFNFQAKRIR 191


>gi|238926324|ref|ZP_04658084.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
 gi|238885728|gb|EEQ49366.1| conserved hypothetical protein [Selenomonas flueggei ATCC 43531]
          Length = 258

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 37/184 (20%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL----EI 136
           L+    ++ L  +      R+L++G G+GA+ +A  K  P     G+D            
Sbjct: 73  LMRRIHSYLLDHLPWDGRGRVLEVGCGSGALSIAAAKRFPLAAVQGIDYWPPMWNYGQAQ 132

Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            ++NA   GV++R      D       +  FD +VSN  +           EVR    + 
Sbjct: 133 CETNAAAEGVADRCTFQHGDAAKLDFPDNHFDAVVSNFVF----------HEVRTQKDKF 182

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-------YNQKVDVVRIFESRKLFLV 247
                         + +   R L K G  ++          Y    + V   +   +  V
Sbjct: 183 -------------MLVEEALRVLKKGGAFAL-HDTYGNKDMYGSMDEFVACLKQHGIADV 228

Query: 248 NAFK 251
           +   
Sbjct: 229 SYLP 232


>gi|167904337|ref|ZP_02491542.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           NCTC 13177]
          Length = 300

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  GVDI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGVDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|897792|emb|CAA50273.1| y210 [Pediococcus acidilactici]
          Length = 211

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 26/167 (15%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +   +++    +I+DL  G GAV L L K++       V+I  +  E+A+ + + N + E
Sbjct: 1   NFAEVKQSSKAQIVDLCAGNGAVGLFLSKKTHG-HVTMVEIQSRLAEMAERSILLNDLKE 59

Query: 149 RFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           R+  L      S+        D IV NPPY  +                         L+
Sbjct: 60  RYRVLNLPLADSLGTIKTDSVDNIVCNPPYFPNHPDSKKNPNQF--------------LA 105

Query: 205 HYRT-I------ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             R  I       +   + L  +G   +    ++  +++  F   +L
Sbjct: 106 IARHEITTSSMKFETSQKMLKMNGKLFMVHRPDRLPEIINDFTQNRL 152


>gi|58337548|ref|YP_194133.1| hypothetical protein LBA1271 [Lactobacillus acidophilus NCFM]
 gi|227904189|ref|ZP_04021994.1| O-methyltransferase [Lactobacillus acidophilus ATCC 4796]
 gi|58254865|gb|AAV43102.1| hypothetical protein LBA1271 [Lactobacillus acidophilus NCFM]
 gi|227868208|gb|EEJ75629.1| O-methyltransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 343

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 19/171 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  DLRIIQDKTAFSFSMDTLLLAYWAKDVI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
                ++I  +    AK +   N +  R    + +  ++ + L    +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEIYSQAKRSVELNDMENRISVYKDNVLNASKHLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEI 227
                +  +     P+ ++      L      I +  S  L   G   +  
Sbjct: 130 PEGHEVNPD-----PKKAIARHE--LLINLEQIIEVASGLLKMKGKMFMVH 173


>gi|53804792|ref|YP_113524.1| hypothetical protein MCA1049 [Methylococcus capsulatus str. Bath]
 gi|53758553|gb|AAU92844.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 399

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 24/131 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL + TG   +             VD S  AL +A  NA  NGV++R   ++ D F 
Sbjct: 224 RVLDLFSYTGGWGVQAALGGAES-VDCVDSSESALALAAENARLNGVADRMGFIRQDVFE 282

Query: 160 SVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++        +D+IV++PP +     D                    G+  Y  +    
Sbjct: 283 FLKQLRHKRQRYDLIVADPPALIKRKKDV-----------------KAGVEAYHRLNQAA 325

Query: 214 SRHLNKDGLCS 224
            + LN  G+  
Sbjct: 326 MQVLNPGGVLV 336


>gi|88860284|ref|ZP_01134922.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas tunicata D2]
 gi|88817482|gb|EAR27299.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudoalteromonas tunicata D2]
          Length = 343

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  +   D   +LD G G G +   L K++P  + + +D+S  A    +    
Sbjct: 189 DHGTALLLKTMTTPDAGTVLDFGCGAGIISAYLGKKNPKLEFICIDVSAFATTATELTLA 248

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +     TL S+  S ++   + IV+NPP+   +  D                     
Sbjct: 249 ANNIKG--VTLLSNGLSELKDKVNHIVTNPPFHTGLNTD--------------------- 285

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                T      R +  +G  
Sbjct: 286 YQITETFIKEAKRFMQPNGSL 306


>gi|238854753|ref|ZP_04645083.1| GIY-YIG catalytic domain protein [Lactobacillus jensenii 269-3]
 gi|260663985|ref|ZP_05864838.1| O-methyltransferase [Lactobacillus jensenii SJ-7A-US]
 gi|282932856|ref|ZP_06338253.1| O-methyltransferase [Lactobacillus jensenii 208-1]
 gi|313472273|ref|ZP_07812765.1| methyltransferase [Lactobacillus jensenii 1153]
 gi|238832543|gb|EEQ24850.1| GIY-YIG catalytic domain protein [Lactobacillus jensenii 269-3]
 gi|239529672|gb|EEQ68673.1| methyltransferase [Lactobacillus jensenii 1153]
 gi|260561871|gb|EEX27840.1| O-methyltransferase [Lactobacillus jensenii SJ-7A-US]
 gi|281302891|gb|EFA95096.1| O-methyltransferase [Lactobacillus jensenii 208-1]
          Length = 336

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 20/187 (10%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           +    E I  I   +    +++    + F    +T LL    L +   R +      I++
Sbjct: 2   KLKNGEKIDHIYSDQ----IQIIQDKEAFSFSLDTILLAAGCLDYIKDRDQ------IVE 51

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
              G  A  + L   S       ++I   A +  K +   N +  R +    D   +V+ 
Sbjct: 52  FCAGNCAASIYLAHRS-EAHFKTIEIQEHAYDQGKRSIELNHLENRVEPFLGDVNDAVKF 110

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                ++++ NPPY +      +    +      ++      L     I    S+ L   
Sbjct: 111 VGRQNNMVLVNPPYFKVAPGHVVNPNEKK-----AIARHEI-LVDLEHIILQASQVLKNK 164

Query: 221 GLCSVEI 227
           G   +  
Sbjct: 165 GRLVMVH 171


>gi|153009089|ref|YP_001370304.1| ribosomal protein L11 methyltransferase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560977|gb|ABS14475.1| ribosomal L11 methyltransferase [Ochrobactrum anthropi ATCC 49188]
          Length = 298

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +        LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NG
Sbjct: 148 LELIEETVNGEHPTNALDLGTGSAVLAIAIAKLAPIP-VLATDIDPVAVTVAAENAAKNG 206

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 207 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 244

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 245 -------LAPSLKEHLASGGSIVLSGILDSQHDAVLAAYQAQGLTHQKTL 287


>gi|83941377|ref|ZP_00953839.1| hypothetical protein EE36_04073 [Sulfitobacter sp. EE-36]
 gi|83847197|gb|EAP85072.1| hypothetical protein EE36_04073 [Sulfitobacter sp. EE-36]
          Length = 249

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 20/154 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR      VD  L      +  +    +L+LG G GA  L L    P  +  GV+I  
Sbjct: 22  WQPRKGYRAGVDPVL--LAATVPAQAGQHVLELGCGVGAASLCLGARVPGLQLTGVEIQP 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N      +  F+ +++D      +  +  FD +++NPPY +           
Sbjct: 80  AYAALARRN------NPAFEVVEADIDAMPLALRQRQFDHVLANPPYFDRHASVAATNSG 133

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
           R+     +L G    L  +  I    ++ L   G
Sbjct: 134 RE----TAL-GEATPLETWVKI---AAKRLAPKG 159


>gi|257421689|ref|ZP_05598679.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|257163513|gb|EEU93473.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|315155561|gb|EFT99577.1| methyltransferase small domain protein [Enterococcus faecalis
           TX0043]
          Length = 244

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 77/190 (40%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIKIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  ATIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|229027882|ref|ZP_04184037.1| hypothetical protein bcere0028_220 [Bacillus cereus AH1271]
 gi|228733396|gb|EEL84223.1| hypothetical protein bcere0028_220 [Bacillus cereus AH1271]
          Length = 246

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERVHLIHGDLKDMPERLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|169833882|ref|YP_001695157.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|226710119|sp|B1I7P5|PRMA_STRPI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|168996384|gb|ACA36996.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           Hungary19A-6]
          Length = 316

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|53726117|ref|YP_104049.1| ribosomal protein L11 methyltransferase [Burkholderia mallei ATCC
           23344]
 gi|121601286|ref|YP_991774.1| ribosomal protein L11 methyltransferase [Burkholderia mallei SAVP1]
 gi|124385858|ref|YP_001027267.1| ribosomal protein L11 methyltransferase [Burkholderia mallei NCTC
           10229]
 gi|126450877|ref|YP_001082797.1| ribosomal protein L11 methyltransferase [Burkholderia mallei NCTC
           10247]
 gi|166998585|ref|ZP_02264443.1| ribosomal protein L11 methyltransferase [Burkholderia mallei
           PRL-20]
 gi|238561259|ref|ZP_00442332.2| ribosomal protein L11 methyltransferase [Burkholderia mallei GB8
           horse 4]
 gi|254178904|ref|ZP_04885558.1| ribosomal protein L11 methyltransferase [Burkholderia mallei ATCC
           10399]
 gi|254202768|ref|ZP_04909131.1| ribosomal protein L11 methyltransferase [Burkholderia mallei FMH]
 gi|254208110|ref|ZP_04914460.1| ribosomal protein L11 methyltransferase [Burkholderia mallei JHU]
 gi|60390319|sp|Q62GX2|PRMA_BURMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223398|sp|A3MRB1|PRMA_BURM7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223399|sp|A2S5P8|PRMA_BURM9 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223400|sp|A1V0M1|PRMA_BURMS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52429540|gb|AAU50133.1| ribosomal protein L11 methyltransferase [Burkholderia mallei ATCC
           23344]
 gi|121230096|gb|ABM52614.1| ribosomal protein L11 methyltransferase [Burkholderia mallei SAVP1]
 gi|124293878|gb|ABN03147.1| ribosomal protein L11 methyltransferase [Burkholderia mallei NCTC
           10229]
 gi|126243747|gb|ABO06840.1| ribosomal protein L11 methyltransferase [Burkholderia mallei NCTC
           10247]
 gi|147747015|gb|EDK54092.1| ribosomal protein L11 methyltransferase [Burkholderia mallei FMH]
 gi|147752004|gb|EDK59071.1| ribosomal protein L11 methyltransferase [Burkholderia mallei JHU]
 gi|160694818|gb|EDP84826.1| ribosomal protein L11 methyltransferase [Burkholderia mallei ATCC
           10399]
 gi|238524959|gb|EEP88389.1| ribosomal protein L11 methyltransferase [Burkholderia mallei GB8
           horse 4]
 gi|243065269|gb|EES47455.1| ribosomal protein L11 methyltransferase [Burkholderia mallei
           PRL-20]
          Length = 300

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGIDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|257095671|ref|YP_003169312.1| 50S ribosomal protein L11 methyltransferase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048195|gb|ACV37383.1| ribosomal protein L11 methyltransferase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 296

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 17/137 (12%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD G G+G + +A  +     + VGVDI  +A+  ++SNA  NGVS RF      
Sbjct: 164 PGLSVLDYGCGSGILAIASAR-LGAAEVVGVDIDEQAVIASRSNAERNGVSARFQ----G 218

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF---DPRISLDG---GIDGLSHYRTIA 210
               + G FD++V+N   I +  +  L   +        R++L G      G       A
Sbjct: 219 SGRELNGQFDLVVAN---ILANPLKVLAPAICGHVRRGGRLALSGILSEQTG-DLIAAYA 274

Query: 211 DGVSRHLNK--DGLCSV 225
             +  HL    DG   +
Sbjct: 275 PYLPLHLADTRDGWVCL 291


>gi|238918467|ref|YP_002931981.1| ribosomal RNA large subunit methyltransferase G (2) [Edwardsiella
           ictaluri 93-146]
 gi|238868035|gb|ACR67746.1| ribosomal RNA large subunit methyltransferase G (2) [Edwardsiella
           ictaluri 93-146]
          Length = 381

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  + +     + DLG G G + LA L  SP  + +  D S  A+  A  N  
Sbjct: 220 DIGARFFLQHLPEGLQGEVADLGCGNGVLGLAALSGSPQARVLFADESYMAVASAHLNVQ 279

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +    +  +  E G  D ++ NPP+ +   +            +++ D  
Sbjct: 280 HNRPQDLARCEFWVGNGLAGREGGTLDAVLCNPPFHQQHSITD----------QVAWD-- 327

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK---VDVVRIF 239
                    +     R L ++G+  + +G         + R+F
Sbjct: 328 ---------MFVAARRCLKRNGVLYI-VGNRHLDYYPKLRRLF 360


>gi|307941570|ref|ZP_07656925.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
 gi|307775178|gb|EFO34384.1| methyltransferase type 11 [Roseibium sp. TrichSKD4]
          Length = 217

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              + +++  +   +L+LG GTG   +A  K  P  +  G+DIS + L  A+ N    G 
Sbjct: 34  DHLINQLDVPEGGTVLELGCGTGRNLIAAAKRYPSAQFFGLDISDQMLATARKNIEKAGY 93

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           S R   +Q D             SN P +     D        +   +        +  +
Sbjct: 94  SNRIKLIQGD------------ASNAPAVSGFGPDAYSRVFYSYTLSM--------MPIW 133

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           R        +L+ +G  S+ + + Q+  +   F       +N
Sbjct: 134 REALQTGLANLSGEGKISI-VDFGQQERLPSWFRGLLFKWLN 174


>gi|195496369|ref|XP_002095665.1| GE22531 [Drosophila yakuba]
 gi|194181766|gb|EDW95377.1| GE22531 [Drosophila yakuba]
          Length = 615

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    + F                   +      +    + 
Sbjct: 309 LMLVAGIYSSNLSEDEQVELKQELKSFYEELAKDAPYKCTSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P     +   +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPT----EDTTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|50914523|ref|YP_060495.1| methyltransferase [Streptococcus pyogenes MGAS10394]
 gi|50903597|gb|AAT87312.1| Methyltransferase [Streptococcus pyogenes MGAS10394]
          Length = 284

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQKRLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|21910612|ref|NP_664880.1| hypothetical protein SpyM3_1076 [Streptococcus pyogenes MGAS315]
 gi|21904813|gb|AAM79683.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
          Length = 284

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 59  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQKRLADMGQRSI 115

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 116 QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 175

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 176 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 221


>gi|15901611|ref|NP_346215.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           TIGR4]
 gi|111657309|ref|ZP_01408071.1| hypothetical protein SpneT_02001480 [Streptococcus pneumoniae
           TIGR4]
 gi|38605432|sp|Q97P62|PRMA_STRPN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|14973279|gb|AAK75855.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           TIGR4]
          Length = 316

 Score = 65.1 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKLDMVRQSAESAGFFL 290


>gi|229074096|ref|ZP_04207143.1| hypothetical protein bcere0024_230 [Bacillus cereus Rock4-18]
 gi|229094756|ref|ZP_04225762.1| hypothetical protein bcere0020_230 [Bacillus cereus Rock3-29]
 gi|229113709|ref|ZP_04243145.1| hypothetical protein bcere0017_230 [Bacillus cereus Rock1-3]
 gi|228669706|gb|EEL25112.1| hypothetical protein bcere0017_230 [Bacillus cereus Rock1-3]
 gi|228688624|gb|EEL42496.1| hypothetical protein bcere0020_230 [Bacillus cereus Rock3-29]
 gi|228708990|gb|EEL61116.1| hypothetical protein bcere0024_230 [Bacillus cereus Rock4-18]
          Length = 246

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIQLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|163760766|ref|ZP_02167846.1| putative ribosomal protein L11 methyltransferase [Hoeflea
           phototrophica DFL-43]
 gi|162282088|gb|EDQ32379.1| putative ribosomal protein L11 methyltransferase [Hoeflea
           phototrophica DFL-43]
          Length = 295

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 37/176 (21%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +++  +  S       D   +LDLGTG+G + +A     P    +  DI   A ++A +
Sbjct: 141 EMIERVMRASPGGPRGLDP--VLDLGTGSGVLAIAAAMLGP-VHVLATDIDPVATKVATA 197

Query: 140 NAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           N   N  + +   + +  F S      G F +I++N   +   ++               
Sbjct: 198 NVRHNRAATQVKCVTAPGFHSTAFTSAGPFGLIIAN--ILARPLM--------------- 240

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                        +A  + RHL   G   +  I   Q+  V+  F  + +      
Sbjct: 241 ------------RMAPDIKRHLAPGGSVILSGILEGQRRQVLAAFNGQGMRHQKTL 284


>gi|322389373|ref|ZP_08062928.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           parasanguinis ATCC 903]
 gi|321143942|gb|EFX39365.1| cobalt-precorrin-6Y C(15)-methyltransferase [Streptococcus
           parasanguinis ATCC 903]
          Length = 187

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A S+ +++     R+LD+G+GTG+V +      P  + V ++ +  A+ + + N  
Sbjct: 16  EEVRAISIDKLDLHKAKRMLDVGSGTGSVTIQAAVSFPNLEVVAIEQNEDAVALTQENID 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVI 168
             G       ++      +EG FD I
Sbjct: 76  YFGCQ-NITLIKGKAPVELEGQFDAI 100


>gi|320593845|gb|EFX06248.1| ubiE/COQ5 methyltransferase [Grosmannia clavigera kw1407]
          Length = 264

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 53/142 (37%), Gaps = 26/142 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           AF LP + K D   ILD+G G G++     +  P    VGVDIS + L  A   A   G+
Sbjct: 10  AFLLPHLRKTD--HILDVGCGPGSITAGFAQYVPEGTVVGVDISAEVLARATQRAAELGL 67

Query: 147 S----ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +          Q+D  + +           PY +         +V    P ++       
Sbjct: 68  ATSGPGSVSFQQADVLAGL-----------PYADDTFDAVYCSQVI---PHLA------P 107

Query: 203 LSHYRTIADGVSRHLNKDGLCS 224
           L H R     + R L   G+ +
Sbjct: 108 LDHARRAVAEMRRVLKPGGVLA 129


>gi|294010889|ref|YP_003544349.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingobium
           japonicum UT26S]
 gi|292674219|dbj|BAI95737.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingobium
           japonicum UT26S]
          Length = 413

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 26/139 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +  +++LD+G G G + L L   +      G+ +S + L++A+  A   GV
Sbjct: 171 AHIAAKLHLKPGMKVLDIGCGWGGMALYL-HRTCGVDVTGITLSEEQLKVARQRAQDAGV 229

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++       D +  ++G FD IVS                V  F+          G   Y
Sbjct: 230 ADHVRFELID-YRDIDGPFDRIVS----------------VGMFE--------HVGTGDY 264

Query: 207 RTIADGVSRHLNKDGLCSV 225
           RT  +     L  DG+  V
Sbjct: 265 RTFYNKCRELLTPDGVMLV 283


>gi|32475734|ref|NP_868728.1| ribosomal RNA small subunit methyltransferase C [Rhodopirellula
           baltica SH 1]
 gi|32446277|emb|CAD76105.1| probable ribosomal RNA small subunit methyltransferase C
           [Rhodopirellula baltica SH 1]
          Length = 346

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 5/112 (4%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +      F  R      VD A A  +      +   +L+LG G GAV +A    S   
Sbjct: 179 LTVHSRPSVFSHRS-----VDRAAAAMIRNAPIPEGSTVLELGCGNGAVAMAAAMRSKTG 233

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
               VD + +A++  +  A  N +      +  +         D+ + NPPY
Sbjct: 234 HAYAVDCNSRAVQCTERAAAQNQIKNLTAIVNHNGELPNVPPCDIALLNPPY 285


>gi|255280561|ref|ZP_05345116.1| methyltransferase small domain protein [Bryantella formatexigens
           DSM 14469]
 gi|255269026|gb|EET62231.1| methyltransferase small domain protein [Bryantella formatexigens
           DSM 14469]
          Length = 222

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 63/185 (34%), Gaps = 43/185 (23%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD-------ISCKA 133
           ++D      L  +E     ++L++G G+GA+ +   K  P  K  GVD        S   
Sbjct: 38  MMDRVHQTILSYLEYDGKGKLLEVGCGSGALAIRAAKTWPEAKVTGVDYWGSMYNYSK-- 95

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            E+ + NA   GV  R    + D       +  FD +VSN  Y+   I            
Sbjct: 96  -ELCEKNARLEGVGSRCVFQRGDANKLEFPDETFDAVVSN--YVYHNIT----------- 141

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLF 245
                     G   +  + + + R L K G+ ++         Y    D V+  +     
Sbjct: 142 ----------GSDKHELLLESL-RVLKKGGVFAL-HDSMKPRMYTDMKDFVQKLKDMGYQ 189

Query: 246 LVNAF 250
            V   
Sbjct: 190 DVRLV 194


>gi|67523419|ref|XP_659769.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4]
 gi|40745053|gb|EAA64209.1| hypothetical protein AN2165.2 [Aspergillus nidulans FGSC A4]
          Length = 371

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 31/136 (22%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +  P  ++    RILD+GTGTGA  L + ++ P  + +G D+S       + +      +
Sbjct: 126 YRTPLAQQPAPKRILDIGTGTGAWALEMAEQFPEAEIIGTDLSPI-----QPSFSPPNCT 180

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              D  +SDW  S +  FD       YI +  +                 GG  G++ + 
Sbjct: 181 FIIDDAESDWAFSKDEPFD-------YIHARSM-----------------GG--GIADWD 214

Query: 208 TIADGVSRHLNKDGLC 223
            +      HL   G  
Sbjct: 215 RLFRQAYNHLKPGGWL 230


>gi|299768855|ref|YP_003730881.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           DR1]
 gi|298698943|gb|ADI89508.1| Ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           DR1]
          Length = 337

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 71/244 (29%), Gaps = 47/244 (19%)

Query: 31  DDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSAL 86
             R        I ++ + + +      +      + ++         P   ++  +D   
Sbjct: 129 SARHCQLWHLKIEKTEQIKPL-----EKWLKTYTVQVNEQELTICALPGVFSQNHLDVGT 183

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  LP + +    RI D G G G +   L K +       +DI   AL   +     NG+
Sbjct: 184 AVLLPYLNQVKSGRIADFGCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFSRNGI 243

Query: 147 -SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S++         +      D IVSNPP+ + +  +    E               GL  
Sbjct: 244 GSDQLRLQPVIGIADAPTELDAIVSNPPFHQGIHTNYDASE---------------GL-- 286

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGGNDRV 259
                    +HL   G   +         V        I   +         D  G   V
Sbjct: 287 ----CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCQIKTDLQGFK-V 332

Query: 260 LLFC 263
           L  C
Sbjct: 333 LYAC 336


>gi|260548859|ref|ZP_05823081.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           RUH2624]
 gi|260408027|gb|EEX01498.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter sp.
           RUH2624]
          Length = 337

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 56/188 (29%), Gaps = 38/188 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    RI D G G G +   L K +       +DI   AL   +    
Sbjct: 180 DVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKVNSSNIIHALDIDAFALRSTEMTFS 239

Query: 143 TNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG+ S++         +      D IVSNPP+ + +  +    E               
Sbjct: 240 RNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255
           GL           +HL   G   +         V        I   +         D  G
Sbjct: 285 GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCEIKTDLQG 329

Query: 256 NDRVLLFC 263
              VL  C
Sbjct: 330 FK-VLYAC 336


>gi|197302048|ref|ZP_03167109.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC
           29176]
 gi|197298857|gb|EDY33396.1| hypothetical protein RUMLAC_00776 [Ruminococcus lactaris ATCC
           29176]
          Length = 559

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 17/131 (12%)

Query: 53  RILGWRDFY-----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           RIL  +DF+      ++  ++    F+P      ++   +   +  IE +    + DL +
Sbjct: 263 RILYGQDFFYEKLLGLQFKITPFSFFQPNSRGAEVLYETVREYIGDIENK---TVFDLFS 319

Query: 107 GTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVE 162
           GTG +   L    P  K  +GV+I  +A+E AK NA+ NG+S     +  D F     +E
Sbjct: 320 GTGTIGQVLA---PVAKKVIGVEIIEEAVEAAKENALRNGLS-NCKFIAGDVFKVLDEIE 375

Query: 163 GLFDVIVSNPP 173
              DVIV +PP
Sbjct: 376 EKPDVIVLDPP 386


>gi|330969342|gb|EGH69408.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 332

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|317153229|ref|YP_004121277.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943480|gb|ADU62531.1| ribosomal L11 methyltransferase [Desulfovibrio aespoeensis Aspo-2]
          Length = 291

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 84/261 (32%), Gaps = 74/261 (28%)

Query: 13  RVTGLSSHQVIV--DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRL 65
              G+   + +    PDS +   +R     A+              W+DF+         
Sbjct: 49  HPLGMELIRAMETQFPDSEVTWSERESENWAMA-------------WKDFFNPVNCGETF 95

Query: 66  TLSSDTFEPRPE---TELLVDSALAFSLPRIEK-----------------RDVVRILDLG 105
           T+     E   E   T ++++  +AF                              LDLG
Sbjct: 96  TILPPWLEDGSENGTTHIVIEPKMAFGTGHHSTTSLCLATIGTMAKDGVIEPGQSFLDLG 155

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGL 164
           TG+G + + L K      G+G+DI  +A+E A+ NA  N V++          F   E +
Sbjct: 156 TGSGILGIGLCKL--GLTGIGLDIDPQAIECARENAEANAVAQSMRCAVGSIDFLEPEAV 213

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F+++V+N   I S  +  +  ++                             +   G   
Sbjct: 214 FNIVVAN---ILSGPLIEMARDILLH--------------------------VRPGGSLI 244

Query: 225 V--EIGYNQKVDVVRIFESRK 243
           +   +   QK  V   +E   
Sbjct: 245 LSGILADKQKEAVTEAYERLG 265


>gi|238927384|ref|ZP_04659144.1| ribosomal protein L11 methyltransferase [Selenomonas flueggei ATCC
           43531]
 gi|238884666|gb|EEQ48304.1| ribosomal protein L11 methyltransferase [Selenomonas flueggei ATCC
           43531]
          Length = 322

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 45/200 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKR--DVVRILDLGT 106
             R+ +     E  P  + +V              +  A  L  +E+     +R+ D+G 
Sbjct: 128 GRRIVVRPTWEEYTPSGDEIVIDLDPGAAFGTGAHATTAMCLRWLERLVCSRMRVCDVGC 187

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + + +D    A+ +A+ N   N V+     LQSD  ++ +G+  
Sbjct: 188 GSGILAIA-ASKLGAGEVIAMDYDPVAVSVAEENIKQNHVT-NVVALQSDLLAACQGM-- 243

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSV 225
                PP       + +   +                     + D + ++L   G L + 
Sbjct: 244 -----PP------AELITANIIA--------------DIIIRLFDQLDQYLAPGGALLAS 278

Query: 226 EIGYNQKVDVVRIFESRKLF 245
            I  ++  DV R  +     
Sbjct: 279 GIIDDRIDDVERAAKEHGFT 298


>gi|19922302|ref|NP_611015.1| CG7544, isoform A [Drosophila melanogaster]
 gi|281363415|ref|NP_001163156.1| CG7544, isoform B [Drosophila melanogaster]
 gi|122102825|sp|Q7K3B9|MET16_DROME RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|16185375|gb|AAL13909.1| LD39460p [Drosophila melanogaster]
 gi|21627173|gb|AAF58169.2| CG7544, isoform A [Drosophila melanogaster]
 gi|220946252|gb|ACL85669.1| CG7544-PA [synthetic construct]
 gi|220955938|gb|ACL90512.1| CG7544-PA [synthetic construct]
 gi|272432489|gb|ACZ94428.1| CG7544, isoform B [Drosophila melanogaster]
          Length = 305

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 30/180 (16%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +++Y++ +  +  +  P    R    L ++  +            +R +D+G G+  +  
Sbjct: 66  KEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEPL-----NLQNIRGIDIGCGSSCIYS 120

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWFSSVEGLFD------ 166
            L  +   +  + ++   + +E AK N   N +    +   Q D  +  +  F+      
Sbjct: 121 LLGAKKNGWHMLALESKPQNIEYAKENVKRNHMESLIEVYAQPDNTNIFKSYFEQDQQQL 180

Query: 167 ---VIVSNPPYIESVIVDCLGLEVRDFD----PRISLDGGIDGL-------SHYRTIADG 212
                + NPP+ +S + + LG   R+ +    P  +  G  + L          + I D 
Sbjct: 181 QYQFCLCNPPFFDSNLPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDE 240


>gi|226946159|ref|YP_002801232.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ]
 gi|226721086|gb|ACO80257.1| rRNA (guanine-N(2)-)-methyltransferase [Azotobacter vinelandii DJ]
          Length = 333

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L R++      +LD G G G +   L +  P  + + +D+   AL  ++    
Sbjct: 177 DRGTALLLERLDGLPPGDLLDFGCGAGVLGALLKRRYPQSRVILLDVDAFALASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +  T+  D           IVSNPP+ + V  D    E                
Sbjct: 237 ANGLEAQ--TIAGDGIRDAPDGLAAIVSNPPFHQGVHTDYRATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    +RHL   G  
Sbjct: 279 -----DLLREAARHLRPGGEL 294


>gi|301770471|ref|XP_002920643.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like
           [Ailuropoda melanoleuca]
          Length = 621

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +   L    L   +    +      +
Sbjct: 376 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTLAAEVLYTVIQDWAQLDTGSTV 432

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           LD+  GTG + LAL       + VG+++  +A+E A+ NA  N ++   +    
Sbjct: 433 LDVCCGTGTIGLALAPRVK--RVVGIELCQEAVEDARVNARDNELT-NVEFHCG 483


>gi|149202963|ref|ZP_01879934.1| methyltransferase small [Roseovarius sp. TM1035]
 gi|149143509|gb|EDM31545.1| methyltransferase small [Roseovarius sp. TM1035]
          Length = 235

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +P+      VD  L      +  R    +LDLG G+G   L +    P     G++I   
Sbjct: 3   QPKTGYRAGVDPVL--LAASVPARAGQSLLDLGCGSGIAALCVASRVPGVTLAGLEIQAA 60

Query: 133 ALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
              +A+ N+ +NG++ E F+   +D  +S+    FD +++NPPY E  
Sbjct: 61  YAALARQNSASNGIALEVFEGDIADMPASLRRRQFDHVIANPPYFERD 108


>gi|256789367|ref|ZP_05527798.1| hypothetical protein SlivT_33188 [Streptomyces lividans TK24]
          Length = 410

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 26/149 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 269 RVVDLGCGNGVVGTAVALADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 328

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V +G  D++++NPP+                             +    +  G  R L 
Sbjct: 329 GVPDGSVDLVLNNPPFHSHQATTD---------------------ATAWRMFTGARRVLR 367

Query: 219 KDGLCSVEIGYNQ---KVDVVRIFESRKL 244
             G   V +G       V + R+F + +L
Sbjct: 368 PGGELWV-VGNRHLGYHVRLRRLFGNSEL 395


>gi|331701330|ref|YP_004398289.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
 gi|329128673|gb|AEB73226.1| methyltransferase small [Lactobacillus buchneri NRRL B-30929]
          Length = 250

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 25/172 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  S D F    +  LL D        R  +    +I+D+  G GAV L L  E   
Sbjct: 18  GIQIIQSKDVFSFSLDAVLLADFV------RTTQHRTKQIVDMCAGNGAVGLFL-SEKTA 70

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                ++I  +  ++A  +   N + ++   +  D  ++     +   DV+  NPPY  +
Sbjct: 71  AHITMIEIQTRLADMAHRSVELNDLGQQISVVNDDLKNADQYIPKDSVDVVACNPPYFVN 130

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +   +   +L+           I    +  L  +    +
Sbjct: 131 YKTSEKNPNRYLAIARHEITTNLN----------EIVSSAAGLLKMNAKLFM 172


>gi|219110012|ref|XP_002176758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411293|gb|EEC51221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 695

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 49  ESIHRILGWRDFYNVR-----LTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRI 101
             +  + G + F + R       +S   F        E+L    +       +      +
Sbjct: 463 HPVQHVYGKQ-FLHERLGKCIFQISPGAFFQVNTEGAEILYQLVVDQIREVSQNPKDTTL 521

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + L  + E    + VGVDIS  A+  A+ NA  NG   ++D         V
Sbjct: 522 LDVCCGTGTIGLTCVTEGVVAEVVGVDISEPAINDARKNAELNGCG-QYDKDTGGLIHFV 580

Query: 162 EGLFDVIVS 170
            G  + I++
Sbjct: 581 AGRAEQIMT 589


>gi|85374396|ref|YP_458458.1| cyclopropane fatty acid synthase [Erythrobacter litoralis HTCC2594]
 gi|84787479|gb|ABC63661.1| cyclopropane fatty acid synthase [Erythrobacter litoralis HTCC2594]
          Length = 419

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  LA    +++ +  +R++++G G G + + L ++       G+ +S +  ++A   A 
Sbjct: 171 ERKLAHIAAKLDLKPGMRVVEIGCGWGGLAIYLARKF-DVHVTGITLSEEQAKLAVERAE 229

Query: 143 TNGVSERFDTLQSDW--FSSVEGLFDVIVS 170
             GV+++ D    D+  F+   G FD +VS
Sbjct: 230 AAGVADKVDIKLIDYRAFAESGGKFDRVVS 259


>gi|53720593|ref|YP_109579.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           K96243]
 gi|167740256|ref|ZP_02413030.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           14]
 gi|167817474|ref|ZP_02449154.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           91]
 gi|167847363|ref|ZP_02472871.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           B7210]
 gi|60390329|sp|Q63QN9|PRMA_BURPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52211007|emb|CAH36995.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           K96243]
          Length = 300

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGIDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|152973882|ref|YP_001373399.1| hypothetical protein Bcer98_0029 [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152022634|gb|ABS20404.1| conserved hypothetical protein [Bacillus cytotoxicus NVH 391-98]
          Length = 246

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 65/185 (35%), Gaps = 18/185 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++  S   F    +  LL +                 +LDL TG   + L L K +   
Sbjct: 17  MKIIQSPSVFNFSLDAVLLANFVWVPI-------QRGNLLDLCTGNAVIPLLLSKRTKG- 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESV 178
           K  GV+I  +  ++   +   N + ER   +  D            +D +  NPPY ++ 
Sbjct: 69  KITGVEIQERLYDMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTCNPPYFQTP 128

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                    ++ +  +++      +     +    S+ + + G  +      + +D+V +
Sbjct: 129 KSSE-----KNINEHLAIARHEI-MCTLEDVVRASSQLVKQGGKVAFVHRPGRLLDIVTL 182

Query: 239 FESRK 243
               K
Sbjct: 183 MRKYK 187


>gi|16552598|dbj|BAB71349.1| unnamed protein product [Homo sapiens]
          Length = 562

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-I 101
           +   +  + G R    D   +   +S   F    +        L   +    + D    +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSMV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  N +S   +    
Sbjct: 437 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELS-NVEFHCG 487


>gi|126733090|ref|ZP_01748845.1| N-6 Adenine-specific DNA methylase [Sagittula stellata E-37]
 gi|126706467|gb|EBA05549.1| N-6 Adenine-specific DNA methylase [Sagittula stellata E-37]
          Length = 153

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +PR       D  +      ++      +L+LG G GA    L    P     G++I 
Sbjct: 8   VLQPRQGYRAGTDPVI--LAASVQACAGETVLELGCGGGAALCCLGWRVPGLTLTGLEIQ 65

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
               ++A+ N   NG++   +  + D  +    L    FD +++NPPY E+ 
Sbjct: 66  PGYADLARRNLAGNGLAG--EIHEGDVAAPPAALKARSFDHVIANPPYFETG 115


>gi|153956378|ref|YP_001397143.1| methyltransferase [Clostridium kluyveri DSM 555]
 gi|219856691|ref|YP_002473813.1| hypothetical protein CKR_3348 [Clostridium kluyveri NBRC 12016]
 gi|146349236|gb|EDK35772.1| Predicted methyltransferase [Clostridium kluyveri DSM 555]
 gi|219570415|dbj|BAH08399.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 246

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 27/173 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +  R+++    R++DL +GTG V   L  ++   K +G++I    +E++    
Sbjct: 33  VDAVLLANFARVKR--GARVIDLCSGTGIVPFILSGKTQAGKIIGIEIQKDMVEMSIRTV 90

Query: 142 VTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPY-------IESVIVDCLGLEVRDF 190
             N +    + +  D     +       DV+  NPPY       I S   + +       
Sbjct: 91  KFNNMENIIEFVNRDLKDLNYLKSIPKADVVTVNPPYKLKGSGIINSKEKNAIARHEICC 150

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +                 +       L  +G   +    ++  D++       
Sbjct: 151 E--------------LEDVIRAAKTVLRDNGKFYMIHRPDRMADIICTMRQHG 189


>gi|134280036|ref|ZP_01766747.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           305]
 gi|134248043|gb|EBA48126.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           305]
          Length = 302

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  G+DI  +A+E A+ N+  N 
Sbjct: 156 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGIDIDPQAVEAARHNSERN- 213

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 214 ---RADVTYGLPDDCPDGEFDIVVAN 236


>gi|330723241|gb|AEC45611.1| Methyltransferase small domain protein [Mycoplasma hyorhinis MCLD]
          Length = 257

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +  +   + K+ +   L++GT   A+ + + +         +DI  KA+E+AK N 
Sbjct: 31  VDTIMLGNFISLNKK-IKNSLEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYIE---SVIVDCLGLEVRD-- 189
           + N    + + +  D+    +         +D+I +NPPY +     +   +  E++   
Sbjct: 90  ILNKKEAQINLITQDFNDFWKEHTKLQKRKYDLIFTNPPYYKLGTKNVKKQISEELKKAI 149

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++  I+L            I  G S+ + + G+ S+ +   + VDV+ +    K 
Sbjct: 150 YEISINL----------EQIILGSSKIIQQKGILSMVLPVERLVDVIELLRKYKF 194


>gi|323466327|gb|ADX70014.1| O-methyltransferase [Lactobacillus helveticus H10]
          Length = 343

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  DLRIIQDKTAFSFSMDTLLLAYWAKNQI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    AK +   N +  R    + +  ++ +      +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEIYSQAKRSIELNRMENRIAVHKDNVLNAAKFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PEGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMFMVH 173


>gi|304373128|ref|YP_003856337.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1]
 gi|304309319|gb|ADM21799.1| Methyltransferase small domain protein [Mycoplasma hyorhinis HUB-1]
          Length = 257

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 76/175 (43%), Gaps = 23/175 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ +  +   + K+ +   L++GT   A+ + + +         +DI  KA+E+AK N 
Sbjct: 31  VDTIMLGNFISLNKK-IKNSLEIGTNNAALAIFVAERDSNLLIDAIDIQQKAIELAKENV 89

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYIE---SVIVDCLGLEVRD-- 189
           + N    + + +  D+    +         +D+I +NPPY +     +   +  E++   
Sbjct: 90  ILNKKEAQINLITQDFNDFWKEHTKLQKRKYDLIFTNPPYYKLGTKNVKKQISEELKKAI 149

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++  I+L            I  G S+ + + G+ S+ +   + VDV+ +    K 
Sbjct: 150 YEISINL----------EQIILGSSKIIQQKGILSMVLPVERLVDVIELLRKYKF 194


>gi|220908170|ref|YP_002483481.1| hypothetical protein Cyan7425_2774 [Cyanothece sp. PCC 7425]
 gi|219864781|gb|ACL45120.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
          Length = 254

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 15/157 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                  +++ G G G+  +  L  SPF     G D++  A +IA+S      +++++  
Sbjct: 48  RCHPGATVVEFGCGEGSPVINALLRSPFSGTIHGYDLNASACDIAQSTITQYRLNQQYQI 107

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               +FS      D +++NPPY+ +                  L GG DG      +   
Sbjct: 108 YNCSFFSFSHPQADYLIANPPYLPAEDNKIYMPL---------LHGGQDGAGITNQLLS- 157

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
               L+   +  +   Y+  V  + +  ++   +V+ 
Sbjct: 158 ----LDYPQVLLMLSSYSNPVQTINLALAQGYDVVDF 190


>gi|167464491|ref|ZP_02329580.1| ribosomal protein L11 methyltransferase [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 322

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 46/218 (21%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELL-------------VDSALAFSLPRIEKR 96
           W+ ++        + +  + + +EP  +  +L               ++L   +     R
Sbjct: 114 WKKYFKPIRVTKRLTIKPTWEEYEPSTDEIILELDPGMAFGTGTHATTSLCLKILEQVVR 173

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D+GTG+G + +A  K       + +D+   A++ A  N+  NG+  R    QSD
Sbjct: 174 GGEDVIDVGTGSGILSIAAAKLGAE-HVLAIDLDPVAVKSAGENSKLNGMQSRIMVRQSD 232

Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +E     D +          +   + + V +    ++               + V 
Sbjct: 233 LLGILEHSEKRDEL---------NVKMPVQIVVANI---LA--------EIILLFVEDVY 272

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
           + L   GL  V   I   Q V V    +     +V   
Sbjct: 273 QVLEPGGLYIVSGVIRAKQAV-VEDALKRAGFEIVEIH 309


>gi|124485044|ref|YP_001029660.1| methyltransferase [Methanocorpusculum labreanum Z]
 gi|124362585|gb|ABN06393.1| methyltransferase [Methanocorpusculum labreanum Z]
          Length = 200

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            LL ++ALA  +      + + ++DLG GTG + +            GVDI   AL+IA+
Sbjct: 35  RLLHEAALAGDI------EGMTVVDLGCGTGMLSIGAALL--GASVTGVDIDEAALKIAR 86

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLG 184
            NA   GV    + L+     + E L  D ++ NPP+          
Sbjct: 87  KNAEKFGVD--IEWLRMRIDETAEPLSADTVLMNPPFGAQKEHADRP 131


>gi|76812155|ref|YP_334873.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1710b]
 gi|126439278|ref|YP_001060478.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           668]
 gi|254258318|ref|ZP_04949372.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1710a]
 gi|254299321|ref|ZP_04966771.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           406e]
 gi|123597942|sp|Q3JNI0|PRMA_BURP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223401|sp|A3NDQ7|PRMA_BURP6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|76581608|gb|ABA51083.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1710b]
 gi|126218771|gb|ABN82277.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           668]
 gi|157809259|gb|EDO86429.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           406e]
 gi|254217007|gb|EET06391.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           1710a]
          Length = 300

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+    +  G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGRVTGIDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|303233714|ref|ZP_07320368.1| ribosomal protein L11 methyltransferase [Finegoldia magna BVS033A4]
 gi|302495148|gb|EFL54900.1| ribosomal protein L11 methyltransferase [Finegoldia magna BVS033A4]
          Length = 307

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 34/151 (22%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G + + +  +    +    DI   A++    NA  N +S   + ++     +
Sbjct: 173 VLDIGCGSGILSV-VSSKLGAKEVFATDIDPLAIKATLENANLNKIS-NINAVKGSLLDN 230

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V+  +DV+V+N           L                   L+    +   + + L KD
Sbjct: 231 VDKKYDVVVAN----------IL-------------------LNVLDILIPDLPKALKKD 261

Query: 221 GLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
           G+      I  +Q+ ++V   E   L +V  
Sbjct: 262 GVFICSGLIN-SQRDNIVNTLEKNNLEIVEV 291


>gi|195591421|ref|XP_002085439.1| GD12311 [Drosophila simulans]
 gi|194197448|gb|EDX11024.1| GD12311 [Drosophila simulans]
          Length = 605

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    + F                   +      +    + 
Sbjct: 309 LMLVAGIYSSNLSEDEQVELKQELKSFYEELGKDAPYKCTSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P  +      +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKD----TTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|330975613|gb|EGH75679.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 332

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|329901539|ref|ZP_08272847.1| modification methylase, HemK family [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327549082|gb|EGF33683.1| modification methylase, HemK family [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 319

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 60/184 (32%), Gaps = 47/184 (25%)

Query: 65  LTLSSDTFEP-RPETELLVDSALAFSLPRIE-KRDVVRILDL----------------GT 106
           +    DT+   R     L +  L+ +          VRILD+                G 
Sbjct: 99  VFFGPDTYRFARFIRHALTEHVLSPNTASGSAPHSTVRILDVGCGSGAGGIAAARMMQGA 158

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G                    DI+  AL  A  NA   G+  R      D F++V+G FD
Sbjct: 159 G------------RECSLTLSDINPTALRYAAINADVAGIPVRLAL--GDTFAAVDGQFD 204

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCS 224
           +I+SNPPY+     D      R          G DGL  +    IA      L   G   
Sbjct: 205 LIISNPPYL----YDDNRRTYRH---------GGDGLGRALSVRIAREALTRLAPGGQLL 251

Query: 225 VEIG 228
           +  G
Sbjct: 252 LYTG 255


>gi|326803462|ref|YP_004321280.1| ribosomal protein L11 methyltransferase [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650546|gb|AEA00729.1| ribosomal protein L11 methyltransferase [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 316

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 33/174 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA  L  +  +   R++D+GTG+G + +   K          D     +E AK+N   N 
Sbjct: 159 LAIHLMGLVLKKGDRVIDVGTGSGILAIT-AKRLGAQSVAAYDYDESIIETAKANINLNA 217

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             ++     +D  + +    DVI +N                      ++          
Sbjct: 218 GMDQVTVQSNDKLNGIHDQVDVITAN---------------------ILA--------DI 248

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK--DYGGN 256
              +      +L  +G   +  I Y +   +     ++  +L    +  D+ G 
Sbjct: 249 LLPLIPQAYDNLKDNGSFILSGIYYTEVDKLKDALIAKDFYLPWIMRAGDWFGI 302


>gi|260775323|ref|ZP_05884220.1| putative methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608504|gb|EEX34669.1| putative methyltransferase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 375

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 35/198 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKES 119
           ++  L    + +     +   +D    F L  + K     +++DLG G G + + +   +
Sbjct: 197 HHFTLDNLPNVY-----SGEKLDQGARFMLDHLPKNLSDEKVVDLGCGNGVLSVKMGMLN 251

Query: 120 PFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           P  +   VD S  A+E AK N     G   + + L ++     E    +V+V NPP+ + 
Sbjct: 252 PNIQLTCVDESFMAVESAKRNLTRTLGEDRKIECLPNNCLDGFENASANVVVCNPPFHQQ 311

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKV 233
             +             I+             +       L+  G   V     +GY+  V
Sbjct: 312 QAITD----------HIAW-----------QMFCDAKHVLSNGGQLLVIGNRHLGYD--V 348

Query: 234 DVVRIFESRKLFLVNAFK 251
            + ++F    + LV + K
Sbjct: 349 KLSKLFGKSNVKLVASNK 366


>gi|86608182|ref|YP_476944.1| ribosomal protein L11 methyltransferase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556724|gb|ABD01681.1| ribosomal protein L11 methyltransferase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 313

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 32/177 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T+L ++S                + D+G G+G + LA        +   VDI   A++
Sbjct: 156 PTTQLCLESLEMRLESWGGDPPAATLADVGCGSGILSLAAAL-LGVKRVFAVDIDPLAVQ 214

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
               N   NG+++R    Q      +  + D +V N   I + ++  +  E R       
Sbjct: 215 ATMHNRDLNGLTDRIVVAQGSL-EQIPEMVDGLVCN---ILADVILDMIPEFRL------ 264

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
                                + + G   +  I   Q   V  + E+ +  +   ++
Sbjct: 265 --------------------VVKEGGWLILSGILIEQAKLVAEMLEANEWVVAALWR 301


>gi|27365170|ref|NP_760698.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
 gi|37680776|ref|NP_935385.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
 gi|320155553|ref|YP_004187932.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
 gi|81844693|sp|Q8DBJ8|RLMG_VIBVU RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|81859844|sp|Q7MIC5|RLMG_VIBVY RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|27361317|gb|AAO10225.1| Ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           CMCP6]
 gi|37199525|dbj|BAC95356.1| 16S RNA G1207 methylase RsmC [Vibrio vulnificus YJ016]
 gi|319930865|gb|ADV85729.1| ribosomal RNA small subunit methyltransferase C [Vibrio vulnificus
           MO6-24/O]
          Length = 376

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 75/194 (38%), Gaps = 35/194 (18%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           + + L    + +     +   +D    F L  I + D ++ I+DLG G G + +   + +
Sbjct: 198 HKMTLNNLPNVY-----SGESLDLGARFMLEHIPQDDNLKHIIDLGCGNGVLSVKAAQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           P  K   VD S  A+E A+ N   N   S   + + ++      G + D+I+ NPP+ + 
Sbjct: 253 PKAKFTLVDESYMAIESARLNLQENVTASVDAEYIANNCLDGFAGEIADLILCNPPFHQQ 312

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKV 233
             +             I+             +     R L + G   V     +GY+   
Sbjct: 313 QAITD----------HIAW-----------QMFCDAKRVLKRGGKLQVIGNRHLGYD--G 349

Query: 234 DVVRIFESRKLFLV 247
            + R++  + + LV
Sbjct: 350 KLKRLYGDKNVKLV 363


>gi|326332390|ref|ZP_08198668.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae
           bacterium Broad-1]
 gi|325949798|gb|EGD41860.1| S-adenosylmethionine-dependent methyltransferase [Nocardioidaceae
           bacterium Broad-1]
          Length = 357

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 38/74 (51%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              RILD+G G G   +AL +  P    +G+DI   ++++A +NA   GV +R   L  D
Sbjct: 176 PGCRILDVGCGGGWSSIALARAYPEATVLGIDIDQPSVDMAVANAREAGVEDRVRFLCQD 235

Query: 157 WFSSVEGLFDVIVS 170
             +  EG  D+  +
Sbjct: 236 AATVQEGTVDMAFA 249


>gi|201065699|gb|ACH92259.1| FI05218p [Drosophila melanogaster]
          Length = 640

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    + F  +                +      +    + 
Sbjct: 334 LMLVAGIYSSNLSEDEQVELKQELKSFYEDLANDAPYKCSSLYYQDVKHREAGQTINPVE 393

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P  +      +LD+  
Sbjct: 394 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKD----TTMLDICC 449

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 450 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 489


>gi|16769886|gb|AAL29162.1| SD08036p [Drosophila melanogaster]
          Length = 615

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    + F  +                +      +    + 
Sbjct: 309 LMLVAGIYSSNLSEDEQVELKQELKSFYEDLAKDAPYKCSSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P  +      +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKD----TTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|15605998|ref|NP_213375.1| hypothetical protein aq_533 [Aquifex aeolicus VF5]
 gi|2983178|gb|AAC06779.1| hypothetical protein aq_533 [Aquifex aeolicus VF5]
          Length = 380

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 30/175 (17%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I+  R+F   +  +         +T   +D        R   ++  R+LDL   +G   +
Sbjct: 173 IIEEREF---KFLVD---VVEGLKTGFYLDQRDNREYVRNLVKEGDRVLDLFCYSGGFSV 226

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVS 170
                    K VGVDI+ +A+E+A+ NA  N  S + D +  + F  ++     +D+I++
Sbjct: 227 YCANR--GAKVVGVDINKRAVELARENAKLN--SVKADFVLGNAFDFIQESKEEWDLIIA 282

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +PP I     +   +                 L     +A    + L K G   +
Sbjct: 283 DPPAIAKTKKEKESI-----------------LWAIWKLAYYSFQKLKKGGSLFI 320


>gi|24666579|ref|NP_649083.2| CG3808 [Drosophila melanogaster]
 gi|23093152|gb|AAF49200.3| CG3808 [Drosophila melanogaster]
          Length = 615

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 30/162 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNA---------------IVRSLKHE---SIH 52
           L  V G+ S  +  D    L    + F  +                +      +    + 
Sbjct: 309 LMLVAGIYSSNLSEDEQVELKQELKSFYEDLANDAPYKCSSLYYQDVKHREAGQTINPVE 368

Query: 53  RILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
            I G          ++  +S   F         +L   A+    P  +      +LD+  
Sbjct: 369 HISGSTHITDTIQGLQFRISPLAFFQINTEGANVLYQKAIDLVAPTKD----TTMLDICC 424

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           GTG + LA  K     K +GV+I   A++ A+ NA  NG+  
Sbjct: 425 GTGTITLAFAKHCK--KVMGVEIVPDAIKDAEFNAEANGIKN 464


>gi|312864588|ref|ZP_07724819.1| GIY-YIG catalytic domain protein [Streptococcus downei F0415]
 gi|311099715|gb|EFQ57928.1| GIY-YIG catalytic domain protein [Streptococcus downei F0415]
          Length = 335

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 75/196 (38%), Gaps = 27/196 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  + + F         VDS L    P+   + +  I+DL +G GAV L        
Sbjct: 19  DVKIIQNKEVFSYS------VDSVLLSRFPKFPAKGL--IVDLCSGNGAVGL-FASTKTK 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K + V++  +  ++ + +   NG+SE+   +  D  + ++       D+I+ NPPY ++
Sbjct: 70  AKIMEVELQERLADMGQRSIELNGLSEQVTMINDDLKNLMDHTPRSKVDLILCNPPYFKA 129

Query: 178 VIV----DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   +L            I     + L   G  ++    ++ +
Sbjct: 130 TKTSKKNASQHYLLARHEIATNL----------EEICQVSQQALKTKGRLALVHRPDRFL 179

Query: 234 DVVRIFESRKLFLVNA 249
           +++   +  KL     
Sbjct: 180 EILDTLKKYKLAPKRV 195


>gi|146305786|ref|YP_001186251.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina ymp]
 gi|145573987|gb|ABP83519.1| 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835
           methyltransferase [Pseudomonas mendocina ymp]
          Length = 377

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +  D  R+ DLG G G + +A    SP  +   VD S  A++ A+ N        
Sbjct: 226 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAAALGER 285

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 286 PATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 324

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 325 RMFQQARAALVTGGELWI-VGNRHLGYHAKLARLFR 359


>gi|148260435|ref|YP_001234562.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5]
 gi|146402116|gb|ABQ30643.1| O-methyltransferase-like protein [Acidiphilium cryptum JF-5]
          Length = 239

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 55/159 (34%), Gaps = 8/159 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+++ GTG GA  L L    P  +GVG++   +   +A+ N  TNG       
Sbjct: 35  VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                   + G FD   +NPP+             R     ++ +   D L  +      
Sbjct: 95  AADITGPPLTGPFDHAFANPPWRPVADTPSPDPGRR-----LAYEAPGDLLPAW---TAS 146

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           ++R L   G  S+ +        +    +     +    
Sbjct: 147 LTRLLRPRGSLSLILPAASLDTALEAARAAGCGSLRILP 185


>gi|88802687|ref|ZP_01118214.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P]
 gi|88781545|gb|EAR12723.1| hypothetical protein PI23P_08855 [Polaribacter irgensii 23-P]
          Length = 242

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD+G GTG + L L + S       V++   A E +  N   +   +R     + +
Sbjct: 40  PDTILDIGAGTGVLSLMLAQRSDAMTIDAVELDENAYEQSVENFENSDWGDRLYCYNASF 99

Query: 158 FSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
              V      E  +D+IVSNPP+           E R+     +       +S    +  
Sbjct: 100 QEFVAEISIEEETYDLIVSNPPFYTDTFKTL--DEARN----KARF--TSSMSF-EELLL 150

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           GVS+ L++ G  SV I + +K + + +    KLFL
Sbjct: 151 GVSKILSETGCFSVIIPFKEKANFIALAGENKLFL 185


>gi|219852672|ref|YP_002467104.1| methyltransferase small [Methanosphaerula palustris E1-9c]
 gi|219546931|gb|ACL17381.1| methyltransferase small [Methanosphaerula palustris E1-9c]
          Length = 204

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 7/107 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
                P P    L+  AL          +   ILDLG GTG +              G+D
Sbjct: 24  EQYQTPAPVAARLLYHALMQG-----DLEDRSILDLGCGTGVLTCG-AAMMGAVSVTGID 77

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGLFDVIVSNPPY 174
           I  +A+++A++NA   G+S  F T   SD    ++G FD ++ NPP+
Sbjct: 78  IDARAIQVAEANARRCGISATFITGDVSDQTLPLDGPFDTVIMNPPF 124


>gi|168494310|ref|ZP_02718453.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC3059-06]
 gi|303258718|ref|ZP_07344698.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP-BS293]
 gi|303261882|ref|ZP_07347828.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263745|ref|ZP_07349667.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS397]
 gi|303265721|ref|ZP_07351620.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS457]
 gi|303268576|ref|ZP_07354368.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS458]
 gi|183575775|gb|EDT96303.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC3059-06]
 gi|301802478|emb|CBW35236.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           INV200]
 gi|302636965|gb|EFL67454.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302640219|gb|EFL70674.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP-BS293]
 gi|302641855|gb|EFL72210.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS458]
 gi|302644848|gb|EFL75096.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS457]
 gi|302646783|gb|EFL77008.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS397]
          Length = 316

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|304382873|ref|ZP_07365356.1| ribosomal protein L11 methyltransferase [Prevotella marshii DSM
           16973]
 gi|304336058|gb|EFM02305.1| ribosomal protein L11 methyltransferase [Prevotella marshii DSM
           16973]
          Length = 306

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 4/98 (4%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T ++V   +             R+LD G GTG + + +  +         DI   ++E
Sbjct: 149 PTTHMIVSILMDMEKTLETTMKGKRVLDCGCGTGILSI-IASQCGASFITSYDIDEWSVE 207

Query: 136 IAKSNAVTNGVSERFDTLQS--DWFSSVEGLFDVIVSN 171
             + NA+ N V +  + L    D  S V+G+FD++++N
Sbjct: 208 NTRHNALLNQV-DNIEVLHGTVDVLSHVDGVFDIVLAN 244


>gi|225855213|ref|YP_002736725.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           JJA]
 gi|254783318|sp|C1CG04|PRMA_STRZJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225722408|gb|ACO18261.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           JJA]
          Length = 316

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|304314211|ref|YP_003849358.1| methyltransferase [Methanothermobacter marburgensis str. Marburg]
 gi|302587670|gb|ADL58045.1| predicted methyltransferase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 338

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 61  YNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y  R+ +   S  F PR         A    +   + ++   +LD+  G G   +A+ + 
Sbjct: 157 YGSRIKVDIRSVYFSPR--------LANEREIVARQVKEGDVVLDMFAGAGPFAVAVARH 208

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYI 175
               +   VDI+  A+   + NA  N   +    ++    D+ +  E   D ++ N P  
Sbjct: 209 GKASRIYAVDINPAAVGYIRENARLNRAEDIIVPVEGDVQDFLNDKECFADHVIMNLPGT 268

Query: 176 ESVIVDCLGLEVRD 189
               +D     VRD
Sbjct: 269 ACEFLDDAIRAVRD 282


>gi|302509536|ref|XP_003016728.1| hypothetical protein ARB_05020 [Arthroderma benhamiae CBS 112371]
 gi|291180298|gb|EFE36083.1| hypothetical protein ARB_05020 [Arthroderma benhamiae CBS 112371]
          Length = 283

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         ++++GTG+G +   L        G      +G D++ KA    +     
Sbjct: 54  LPTSTTSPSPVVVEVGTGSGVILGFLAANCKAILGRSDILTIGTDVNRKACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                                NA      +    +  D  S +  G+ D+++ NPPY+ +
Sbjct: 114 AIADNYSVENFRATPANKEKTNAEAPKPVQPLAVITGDLCSPLRPGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGLEVR---------DFDPR-----ISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +  L               F+       ++  GG  G+     + D +   LN + G+
Sbjct: 174 PELPHLPSSSEVTSSASGMSKFEIESYFLSLTYAGGEHGMEITDRLLDSIPHVLNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|94496504|ref|ZP_01303081.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas sp. SKA58]
 gi|94424250|gb|EAT09274.1| 3-demethylubiquinone-9 3-methyltransferase [Sphingomonas sp. SKA58]
          Length = 248

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 54/180 (30%), Gaps = 30/180 (16%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +     +P  + E  +  A    + R+      RILDLG G G   +   +    ++  G
Sbjct: 19  VDHSLNKPFSDPECGMHLAAIGFIMRLLPPPPARILDLGCGGGWTSIFYARL--GYQVTG 76

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGL 185
            DI+   + +A+ NA  N V  R D L  D+    +   +D  +                
Sbjct: 77  QDIAPDMIAVARDNARINDVGSRTDFLCGDFEHMELGAQYDAAIF--------------F 122

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           +        +L                  R L   G+    E G         I    + 
Sbjct: 123 DSLHHAEDEALA------------IHAAWRALKPGGILITHEPGEGHSQSAESIAAMARF 170


>gi|62290310|ref|YP_222103.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 1
           str. 9-941]
 gi|82700234|ref|YP_414808.1| ribosomal protein L11 methyltransferase [Brucella melitensis biovar
           Abortus 2308]
 gi|189024544|ref|YP_001935312.1| ribosomal protein L11 methyltransferase [Brucella abortus S19]
 gi|237815817|ref|ZP_04594814.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308
           A]
 gi|254697754|ref|ZP_05159582.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254730643|ref|ZP_05189221.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260546853|ref|ZP_05822592.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC
           8038]
 gi|260758358|ref|ZP_05870706.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260762184|ref|ZP_05874527.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
 gi|81309399|sp|Q57C92|PRMA_BRUAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|123547003|sp|Q2YPS7|PRMA_BRUA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710055|sp|B2S6P1|PRMA_BRUA1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|62196442|gb|AAX74742.1| ribosomal protein L11 methyltransferase, hypothetical [Brucella
           abortus bv. 1 str. 9-941]
 gi|82616335|emb|CAJ11392.1| SAM (and some other nucleotide) binding motif [Brucella melitensis
           biovar Abortus 2308]
 gi|189020116|gb|ACD72838.1| SAM (and some other nucleotide) binding motif [Brucella abortus
           S19]
 gi|237789115|gb|EEP63326.1| ribosomal protein L11 methyltransferase [Brucella abortus str. 2308
           A]
 gi|260095903|gb|EEW79780.1| ribosomal protein L11 methyltransferase [Brucella abortus NCTC
           8038]
 gi|260668676|gb|EEX55616.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 4
           str. 292]
 gi|260672616|gb|EEX59437.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 2
           str. 86/8/59]
          Length = 285

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQTQGLTHQKTL 274


>gi|261326189|emb|CBH09015.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 559

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  LS  +F       +  +  L  ++   E      +LDL  GTG + +AL K    
Sbjct: 363 GLQFELSPTSFFQVNTAGM--ELLLRETVAVAELTPETTLLDLCCGTGTIGIALAKHVK- 419

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV--EGLFDVI-VSNP 172
            + +G+++   A+  A+ NA  NGV        R + L     S +  E   D++ + +P
Sbjct: 420 -RVIGIELVESAVRDARLNAERNGVRNATFNCGRVEHLLPSVISQLSPEDRMDIVAILDP 478

Query: 173 P 173
           P
Sbjct: 479 P 479


>gi|229015437|ref|ZP_04172439.1| hypothetical protein bcere0030_340 [Bacillus cereus AH1273]
 gi|229021642|ref|ZP_04178229.1| hypothetical protein bcere0029_230 [Bacillus cereus AH1272]
 gi|228739645|gb|EEL90054.1| hypothetical protein bcere0029_230 [Bacillus cereus AH1272]
 gi|228745856|gb|EEL95856.1| hypothetical protein bcere0030_340 [Bacillus cereus AH1273]
          Length = 246

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIVQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GTITGVEIQERLYDMGIRSVQYNNLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PQTSE-----KNMNEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVAFVHRPGRFLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|255569806|ref|XP_002525867.1| Methionine S-methyltransferase, putative [Ricinus communis]
 gi|223534872|gb|EEF36561.1| Methionine S-methyltransferase, putative [Ricinus communis]
          Length = 1001

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 70/210 (33%), Gaps = 34/210 (16%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           +    F P   +    +  L      I K     + +LG G G + +A+  +    K  G
Sbjct: 3   VIPSIFIPEDWSFTFYE-GLNRHPDSIFKDKT--VAELGCGNGWISIAIADKWLPSKVYG 59

Query: 127 VDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWFS---SVEGLFDVI 168
           +DI+ +A++++  N   N +                +R    +SD  S     +   + I
Sbjct: 60  LDINPRAVKVSWINLYLNALDENGQPIYDAEKKTLLDRVQFHESDLLSYCRDHDIQLERI 119

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLSHYRTIADGVSRH 216
           V   P I +   D +   + +              +L G ++   GL       +     
Sbjct: 120 VGCIPQILNPNPDAMSKMITENASEEFLYSLSNYCALQGFVEDQFGLGLIARAVEEGISV 179

Query: 217 LNKDGLCSVEIGYNQKVDV-VRIFESRKLF 245
           +   G+    +G      V  R+FE R   
Sbjct: 180 IKPMGIMIFNMGGRPGQAVCKRLFERRGFH 209


>gi|262831256|sp|A1S987|TRMN6_SHEAM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 233

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 15/165 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +   ++  D   +LDLG G+G + L +  +        ++I   A    +SN  
Sbjct: 22  DAVLLGAWANLDGADA--VLDLGAGSGLLAL-MAAQRCKAPITAIEIDPVAASACRSNFS 78

Query: 143 TNGVSERFDTLQSDW--FSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +   +R + +++D     ++ G  F  I+ NPPY E+  +           P  +    
Sbjct: 79  ASPWPDRINLIEADATDAEALAGKVFTHILCNPPYFETGPLSE--------KPGRAQARH 130

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              L     +   ++ HL+ +G+ S+ +    +    +      L
Sbjct: 131 TGSLGFL-ALCKLITTHLSTEGIASLVLPVESEQAFRQALTHLGL 174


>gi|227892612|ref|ZP_04010417.1| O-methyltransferase [Lactobacillus ultunensis DSM 16047]
 gi|227865597|gb|EEJ73018.1| O-methyltransferase [Lactobacillus ultunensis DSM 16047]
          Length = 343

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  DLRIIQDKTAFSFSMDTLLLAYWAKETI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                ++I  +    AK +   N +  R    + +  ++     +  +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEVYSQAKRSVELNKMENRISVYKDNVLNAPSFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PEGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGRMYMVH 173


>gi|255318657|ref|ZP_05359888.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Acinetobacter
           radioresistens SK82]
 gi|262379118|ref|ZP_06072274.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           radioresistens SH164]
 gi|255304339|gb|EET83525.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Acinetobacter
           radioresistens SK82]
 gi|262298575|gb|EEY86488.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           radioresistens SH164]
          Length = 338

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 26/146 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  +P +++     + D G G G +   L K +P      +D+   AL   +    
Sbjct: 180 DVGTAVLIPYLDQVKSGTLADFGCGAGVIACYLAKSNPANTVYALDVDAFALRSTELTFQ 239

Query: 143 TNGV---SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N V     R   + S   +  E   D IVSNPP+ + +                     
Sbjct: 240 RNQVPASQLRLQPVSSIADAPFE--LDAIVSNPPFHQGIHTH------------------ 279

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     +HL   G   +
Sbjct: 280 ---YEASEELCKTAPQHLKNGGELWI 302


>gi|195583572|ref|XP_002081591.1| GD11099 [Drosophila simulans]
 gi|194193600|gb|EDX07176.1| GD11099 [Drosophila simulans]
          Length = 307

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 66/180 (36%), Gaps = 30/180 (16%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +++Y++ +  +  +  P    R    L ++  +            +R +D+G G+  +  
Sbjct: 66  KEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEPL-----NLQDIRGIDIGCGSSCIYS 120

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSD-------WFSSVEG-- 163
            L  +   +  + ++   + +E A  N   N +    +   Q D       +F   +   
Sbjct: 121 LLGAKKNGWHMLALESKPQNIEYAMKNVKKNHLESLIEVYAQPDNTNIFKSYFEQDQQQL 180

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFD----PRISLDGGIDGL-------SHYRTIADG 212
            +   + NPP+ +S + + LG   R+ +    P  +  G  + L          + I D 
Sbjct: 181 RYQFCLCNPPFFDSNLPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDE 240


>gi|17986875|ref|NP_539509.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|23502288|ref|NP_698415.1| ribosomal protein L11 methyltransferase [Brucella suis 1330]
 gi|161619365|ref|YP_001593252.1| ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365]
 gi|225627869|ref|ZP_03785906.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo]
 gi|225852899|ref|YP_002733132.1| ribosomal protein L11 methyltransferase [Brucella melitensis ATCC
           23457]
 gi|254689612|ref|ZP_05152866.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|254694102|ref|ZP_05155930.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|254702139|ref|ZP_05163967.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|254704675|ref|ZP_05166503.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|254710459|ref|ZP_05172270.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|254714452|ref|ZP_05176263.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|254717350|ref|ZP_05179161.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|256031953|ref|ZP_05445567.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|256045048|ref|ZP_05447949.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113971|ref|ZP_05454754.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|256160152|ref|ZP_05457846.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|256255358|ref|ZP_05460894.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|256257861|ref|ZP_05463397.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|256263619|ref|ZP_05466151.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2
           str. 63/9]
 gi|256369833|ref|YP_003107344.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915]
 gi|260169090|ref|ZP_05755901.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|260565353|ref|ZP_05835837.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|260566077|ref|ZP_05836547.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str.
           40]
 gi|260755139|ref|ZP_05867487.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260884151|ref|ZP_05895765.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|261214400|ref|ZP_05928681.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|261219180|ref|ZP_05933461.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|261222559|ref|ZP_05936840.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|261318030|ref|ZP_05957227.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261322241|ref|ZP_05961438.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|261752708|ref|ZP_05996417.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|261755368|ref|ZP_05999077.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|261758595|ref|ZP_06002304.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|265989061|ref|ZP_06101618.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|265991474|ref|ZP_06104031.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265995312|ref|ZP_06107869.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|265998524|ref|ZP_06111081.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|297248697|ref|ZP_06932415.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5
           str. B3196]
 gi|38605324|sp|Q8FZQ6|PRMA_BRUSU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|38605404|sp|Q8YI53|PRMA_BRUME RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189037691|sp|A9M676|PRMA_BRUC2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254782832|sp|C0RE56|PRMA_BRUMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|17982514|gb|AAL51773.1| ribosomal protein l11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|23348263|gb|AAN30330.1| ribosomal protein L11 methyltransferase, putative [Brucella suis
           1330]
 gi|161336176|gb|ABX62481.1| Ribosomal protein L11 methyltransferase [Brucella canis ATCC 23365]
 gi|225617874|gb|EEH14919.1| ribosomal protein L11 methyltransferase [Brucella ceti str. Cudo]
 gi|225641264|gb|ACO01178.1| ribosomal L11 methyltransferase [Brucella melitensis ATCC 23457]
 gi|255999996|gb|ACU48395.1| ribosomal protein L11 methyltransferase [Brucella microti CCM 4915]
 gi|260151421|gb|EEW86515.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. 16M]
 gi|260155595|gb|EEW90675.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 4 str.
           40]
 gi|260675247|gb|EEX62068.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 6
           str. 870]
 gi|260873679|gb|EEX80748.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 9
           str. C68]
 gi|260916007|gb|EEX82868.1| ribosomal protein L11 methyltransferase [Brucella abortus bv. 3
           str. Tulya]
 gi|260921143|gb|EEX87796.1| ribosomal protein L11 methyltransferase [Brucella ceti B1/94]
 gi|260924269|gb|EEX90837.1| ribosomal protein L11 methyltransferase [Brucella ceti M13/05/1]
 gi|261294931|gb|EEX98427.1| ribosomal protein L11 methyltransferase [Brucella ceti M644/93/1]
 gi|261297253|gb|EEY00750.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           B2/94]
 gi|261738579|gb|EEY26575.1| ribosomal protein L11 methyltransferase [Brucella sp. F5/99]
 gi|261742461|gb|EEY30387.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 5 str.
           513]
 gi|261745121|gb|EEY33047.1| ribosomal protein L11 methyltransferase [Brucella suis bv. 3 str.
           686]
 gi|262553148|gb|EEZ08982.1| ribosomal protein L11 methyltransferase [Brucella ceti M490/95/1]
 gi|262766425|gb|EEZ12214.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 3
           str. Ether]
 gi|263002258|gb|EEZ14833.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263093671|gb|EEZ17676.1| ribosomal protein L11 methyltransferase [Brucella melitensis bv. 2
           str. 63/9]
 gi|264661258|gb|EEZ31519.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M292/94/1]
 gi|297175866|gb|EFH35213.1| 50S ribosomal protein L11 methyltransferase [Brucella abortus bv. 5
           str. B3196]
 gi|326409441|gb|ADZ66506.1| ribosomal protein L11 methyltransferase [Brucella melitensis M28]
 gi|326539147|gb|ADZ87362.1| ribosomal L11 methyltransferase [Brucella melitensis M5-90]
          Length = 285

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQTQGLTHQKTL 274


>gi|307243294|ref|ZP_07525461.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
           stomatis DSM 17678]
 gi|306493312|gb|EFM65298.1| ribosomal protein L11 methyltransferase [Peptostreptococcus
           stomatis DSM 17678]
          Length = 316

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 39/157 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G G+G + +   K       VG+DI   A+++A  N + NGV +    ++ +    
Sbjct: 183 VFDIGCGSGILGIVAAKLGAK-DVVGIDIDAVAVKVANENILMNGVQDIMLAMEGNLADD 241

Query: 161 VEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
           ++     D++V+N   I + I+  L  +V++F                          L 
Sbjct: 242 MDKNRKADIVVAN---IIADIIIILAKDVKNF--------------------------LK 272

Query: 219 KDGLCSVEIGYN----QKVDVVRIFESRKLFLVNAFK 251
           + G+    I       +  DVV   E     +V+  K
Sbjct: 273 EGGIF---ISSGIILAKVDDVVASLEENGFEVVSVEK 306


>gi|270599155|ref|ZP_06221533.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae HK1212]
 gi|270318300|gb|EFA29472.1| ribosomal RNA small subunit methyltransferase C [Haemophilus
           influenzae HK1212]
          Length = 137

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+ + +  L   +    P   +   +D+     L  I+ +   +++DLG G G +   + 
Sbjct: 49  WKTYQHSTLENLTIYSLPGVFSAAELDTGTELLLSTIDNKIKGKVIDLGCGAGVIGSMIK 108

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNG 145
           K +P  +    DI   ALE A+     N 
Sbjct: 109 KRAPNAQITMTDIHAMALESARKTLSENQ 137


>gi|126728320|ref|ZP_01744136.1| N-6 Adenine-specific DNA methylase [Sagittula stellata E-37]
 gi|126711285|gb|EBA10335.1| N-6 Adenine-specific DNA methylase [Sagittula stellata E-37]
          Length = 245

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +PR       D  +      ++      +L+LG G GA    L    P     G++I 
Sbjct: 8   VLQPRQGYRAGTDPVI--LAASVQACAGETVLELGCGGGAALCCLGWRVPGLTLTGLEIQ 65

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESV 178
               ++A+ N   NG++   +  + D  +    L    FD +++NPPY E+ 
Sbjct: 66  PGYADLARRNLAGNGLAG--EIHEGDVAAPPAALKARSFDHVIANPPYFETG 115


>gi|121534357|ref|ZP_01666181.1| methyltransferase small [Thermosinus carboxydivorans Nor1]
 gi|121307127|gb|EAX48045.1| methyltransferase small [Thermosinus carboxydivorans Nor1]
          Length = 252

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 13/122 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+    D F    +  +L   A          R     +DLGTGTG + L LL     
Sbjct: 19  NLRVIQHPDAFCFSLDAIVLAHFA--------TVRTGATAVDLGTGTGVIGL-LLVARGA 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
            + VGV+I   A E A+ +   NG++++   + +D          G +D++V+NPPY   
Sbjct: 70  GRVVGVEIDAVAAERAQRSVQLNGLTKQMAVVAADLRRLKGVLPAGAWDLVVANPPYRPV 129

Query: 178 VI 179
             
Sbjct: 130 GD 131


>gi|329769742|ref|ZP_08261143.1| 50S ribosomal protein L11 methyltransferase [Gemella sanguinis
           M325]
 gi|328838104|gb|EGF87722.1| 50S ribosomal protein L11 methyltransferase [Gemella sanguinis
           M325]
          Length = 311

 Score = 64.7 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 43/160 (26%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    I+D+G G+G + +A        +   VD+   A+++++ N   N +  R    ++
Sbjct: 174 KPHDNIIDVGCGSGILSIA-ASYLTDGEIKAVDLDKLAVDVSRENFALNNLENRIVVEEA 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              +     ++VIV+N               +                     + D   +
Sbjct: 233 SLLTKESKKYNVIVAN---------------ILAH--------------IIELMLDDAYK 263

Query: 216 HLNKDGLCSVEIGY-------NQKVDVVRIFESRKLFLVN 248
            L   G       Y       ++K +++     R   L+ 
Sbjct: 264 LLEDGGY------YITSGIIKDKKDELLEKMLERGFKLIE 297


>gi|315170379|gb|EFU14396.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1342]
 gi|315174969|gb|EFU18986.1| methyltransferase small domain protein [Enterococcus faecalis
           TX1346]
          Length = 244

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 77/190 (40%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  ATIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|239994610|ref|ZP_04715134.1| putative RNA methyltransferase [Alteromonas macleodii ATCC 27126]
          Length = 272

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 26/116 (22%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-------------------------F 122
           ++  R       RILD+GTG+G + L + +++                            
Sbjct: 13  WAQFRANLSHAPRILDIGTGSGILALMMAQKAAHFCNPNGEEQSVQSSSIDISSFDNGAA 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIES 177
           +   ++I  +A   A +N      +++      D    +   L+D+++SNPPY ++
Sbjct: 73  RIDAIEIDEQAAAQAATNFENAKWAKQLFIYCCDVTGYTSPHLYDLVISNPPYFDT 128


>gi|269792808|ref|YP_003317712.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100443|gb|ACZ19430.1| Methyltransferase type 11 [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 248

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 70/177 (39%), Gaps = 29/177 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEIA 137
           VD+ L  +  R++    ++ L++G   G + L L++ +       + VG+DI  + +E+A
Sbjct: 28  VDTILLGAFVRLKGN--LKALEVGCAHGILSLMLIQRARALGANLRVVGIDIQPQLVEMA 85

Query: 138 KSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             N   +G++++   +  D         E  FD++V NPPY +                 
Sbjct: 86  MRNRDLHGMTDQVRFIPMDLMELKGSWEEAPFDLVVCNPPYEDPGSGRPSPR-------- 137

Query: 194 ISLDGGIDGLSHYR------TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                G   L+ +R       +     + L   G   + +  ++  + + +    +L
Sbjct: 138 -----GPVALAVHRMSFTLEDLFLRSGKVLRPKGRFFMVMRSHRMGECLDLMRRHRL 189


>gi|254424091|ref|ZP_05037809.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
 gi|196191580|gb|EDX86544.1| Methyltransferase domain family [Synechococcus sp. PCC 7335]
          Length = 426

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 29/142 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   R  + + VRILD G GTG     L+  +P  + VG+D+S  A+ +AK     
Sbjct: 65  AAYSFCTGRKPETNSVRILDAGCGTGVSTEYLVHLNPEAEVVGIDLSAGAIAVAKERCQR 124

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G ++R     +  +    + G FD+I                + V    P         
Sbjct: 125 SG-ADRASFYNTSIYDVEQIPGKFDLINC--------------VGVLHHLP--------- 160

Query: 202 GLSHYRTIADGVSRHLNKDGLC 223
                R I     + L   G+ 
Sbjct: 161 --DPIRGIQALAKK-LKPGGIF 179


>gi|148984211|ref|ZP_01817506.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923500|gb|EDK74613.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP3-BS71]
 gi|301800569|emb|CBW33209.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           OXC141]
          Length = 316

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|317495397|ref|ZP_07953766.1| hypothetical protein HMPREF0432_00368 [Gemella moribillum M424]
 gi|316914456|gb|EFV35933.1| hypothetical protein HMPREF0432_00368 [Gemella moribillum M424]
          Length = 244

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 20/153 (13%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      + K    +I++L +G G + + +L+E    +   ++I    +E+++ +  
Sbjct: 28  DSFLLPYFSNVPKSSKKKIIELCSGNGGISI-ILREKSQAQIEMLEIQEDLVELSRRSIE 86

Query: 143 TNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRI 194
            N ++   +    D     +      FD ++ NPPY          +     +   +   
Sbjct: 87  LNKLTG-INVKNGDIKKIKDYYKPSSFDYVICNPPYFPVKNMPNQREKFNHNISRHEILC 145

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +L          ++I       L ++G  S+  
Sbjct: 146 NL------SDVIKSI----KYLLKQNGKFSLVH 168


>gi|311897315|dbj|BAJ29723.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Kitasatospora setae KM-6054]
          Length = 461

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/224 (20%), Positives = 76/224 (33%), Gaps = 36/224 (16%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRDFY---- 61
              L          V+    +   +  R     A  R     +I  H  +G  DFY    
Sbjct: 109 RRLLAAAL---RQGVLGPNPAPPPEEVRRRRGPAHSRRRDRAAISHHYDVGN-DFYRLVL 164

Query: 62  NVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              L  S   +EP  ++     +A L     ++  R  +R+LD+G G G++ L   +   
Sbjct: 165 GPSLVYSCAYWEPAAKSLEDAQAAKLDLICRKLGLRPGMRLLDVGCGWGSLVLHAARHY- 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             + VGV IS + + +A+      G+++R D    D+    +G FD I S          
Sbjct: 224 GVEAVGVSISTEQVALARQRIAEAGLADRVDVRLQDYREIPDGPFDAISSV--------- 274

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
             +   V              G + Y   A  +   L   G   
Sbjct: 275 -GMAEHV--------------GSAQYLVYARHLHDLLAPGGRLL 303


>gi|291556618|emb|CBL33735.1| Predicted O-methyltransferase [Eubacterium siraeum V10Sc8a]
          Length = 245

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 28/174 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK- 117
           D    ++ +S D      +  LL D A        +     ++ DL TG G V L + + 
Sbjct: 9   DLSGTKIYVSEDH-RFGTDAFLLADFA--------DPAPHHKVCDLCTGCGIVPLIMCRN 59

Query: 118 --ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP 172
             + P  +  G++I  +A+E+   +   N +S+R   +  D           FD++  NP
Sbjct: 60  ISKKPPKEIYGIEIMPEAVELFDKSVAENNLSDRIKPVLCDLKDPQRIPREYFDIVTVNP 119

Query: 173 PYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           PY +    +    +V+     +   ++D           +    S  L   G  
Sbjct: 120 PYWKKGSGEERLSDVQAAARHEILCNID----------DVMKTASSLLKFGGSL 163


>gi|256061475|ref|ZP_05451619.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
 gi|261325481|ref|ZP_05964678.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
 gi|261301461|gb|EEY04958.1| ribosomal protein L11 methyltransferase [Brucella neotomae 5K33]
          Length = 285

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQTQGLTHQKTL 274


>gi|225420025|ref|ZP_03762328.1| hypothetical protein CLOSTASPAR_06368 [Clostridium asparagiforme
           DSM 15981]
 gi|225041281|gb|EEG51527.1| hypothetical protein CLOSTASPAR_06368 [Clostridium asparagiforme
           DSM 15981]
          Length = 502

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 31/194 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R T   D     P +   V++AL  +L R   ++  ++LD   G G + +   K    
Sbjct: 320 DMRFTYRRDVI---PTSIRPVNAALTAALAREYMKEDAQVLDPFCGVGTMLIERHKAVRA 376

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
               G+DI  +A+  A+ NA      +    +  D+F  + +  FD ++++ P+    + 
Sbjct: 377 NTSYGIDILEEAILKARENAEA--AKQVIHFVNRDFFQFTHDYRFDEVITDMPFKMGRLT 434

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIF 239
           D    +VR                 Y      +   LN   +  +   Y     DV R+ 
Sbjct: 435 DD---DVR---------------DIYERFFQKLPELLNDGAVLIL---YTHDHEDVARLT 473

Query: 240 ESRKLFLVNAFKDY 253
                      KDY
Sbjct: 474 FRTGFS---ILKDY 484


>gi|167749302|ref|ZP_02421429.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702]
 gi|167657747|gb|EDS01877.1| hypothetical protein EUBSIR_00253 [Eubacterium siraeum DSM 15702]
          Length = 245

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 28/174 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK- 117
           D    ++ +S D      +  LL D A        +     ++ DL TG G V L + + 
Sbjct: 9   DLSGTKIYVSEDH-RFGTDAFLLADFA--------DPAPHHKVCDLCTGCGIVPLIMCRN 59

Query: 118 --ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP 172
             + P  +  G++I  +A+E+   +   N +S+R   +  D           FD++  NP
Sbjct: 60  ISKKPPKEIYGIEIMPEAVELFDKSVAENNLSDRIKPVLCDLKDPQGIPREYFDIVTVNP 119

Query: 173 PYIESVIVDCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           PY +    +    +V+     +   ++D           +    S  L   G  
Sbjct: 120 PYWKKGSGEERLSDVQAAARHEILCNID----------DVMKTASSLLKFGGSL 163


>gi|114046747|ref|YP_737297.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-7]
 gi|113888189|gb|ABI42240.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-7]
          Length = 418

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/231 (20%), Positives = 85/231 (36%), Gaps = 28/231 (12%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  +   P++E  ++ A    L     R++ +    +L++
Sbjct: 141 HYDLGNALYEQFLDREMLYSSALY---PDSEASLEQAQLHKLKTICERLDLQPGQTLLEI 197

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   K           IS      AK+     G+S+    L  D + ++ G 
Sbjct: 198 GTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEREGLSDSITLLTED-YRNLSGT 255

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISLDGGIDGLSHYRTIADGVSR 215
           +D +VS    IE+V  + L    +  +    P       ++         YR   D + R
Sbjct: 256 YDRLVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIANQRYDSYRKGVDFIQR 314

Query: 216 HLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFKDY-GGNDRVL 260
           ++   G        VE    +    V   +   L      +D+    DR +
Sbjct: 315 YIFPGGCLPSVQQMVEHLAKRTDMQVWSIDDMGLDYAKTLRDWHNNFDRAI 365


>gi|268318254|ref|YP_003291973.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
 gi|262335788|gb|ACY49585.1| Methyltransferase type 11 [Rhodothermus marinus DSM 4252]
          Length = 274

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 27/170 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  AL     R      VR+LD GTG G     + +  P  + VGVD+    LE A+   
Sbjct: 38  VRRALRRIFDRWPADRPVRVLDAGTGFGQYAYYIARRYPRAEVVGVDLKTDYLEQARRFV 97

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
               V+ R    Q D      EG FD+I+S              ++V +           
Sbjct: 98  ARTPVAGRVRFAQDDLTRLQTEGPFDLILS--------------VDVLEH---------- 133

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             +   R +    +R L   G   +    +Q    V+    +     +  
Sbjct: 134 --IEDDRAVLRNFARVLRPGGYVIINTPSDQGGSDVQAPGQQSFIEEHVR 181


>gi|217420963|ref|ZP_03452468.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           576]
 gi|254199088|ref|ZP_04905503.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           S13]
 gi|169656918|gb|EDS88315.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           S13]
 gi|217396375|gb|EEC36392.1| ribosomal protein L11 methyltransferase [Burkholderia pseudomallei
           576]
          Length = 300

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGHVTGIDIDPQAVEAARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPDGEFDIVVAN 234


>gi|66044239|ref|YP_234080.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
 gi|75503293|sp|Q4ZXT0|RSMC_PSEU2 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|63254946|gb|AAY36042.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 332

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|327468705|gb|EGF14184.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK330]
          Length = 317

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVEIAADVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 291


>gi|305663451|ref|YP_003859739.1| methylase [Ignisphaera aggregans DSM 17230]
 gi|304378020|gb|ADM27859.1| methylase [Ignisphaera aggregans DSM 17230]
          Length = 197

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 27/174 (15%)

Query: 65  LTLSSDTFEPRPETELL------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           L LS   + P  ++ +L      +D+ L+ +            L+LG+G+G V +  +K+
Sbjct: 6   LLLSDKVYNPSDDSYILTKTISDIDNCLSIA------------LELGSGSGYVSIYRMKK 53

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                 + VDIS  ++  +  +A  NG+ +  D +Q D  + +  +  D I  NPPY+  
Sbjct: 54  CRKSYTIMVDISPCSVRSSWESAKINGIDDLVDVIQCDAGACIRSMSIDTIYFNPPYLPV 113

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              + +          IS  GGIDG++ +    +   R    +      +   Q
Sbjct: 114 EEFNDIL--------SISWSGGIDGITVWSKFFNESYRICRDNCKIIFIVSSLQ 159


>gi|289450726|ref|YP_003475098.1| 50S ribosomal protein L11 methyltransferase [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289185273|gb|ADC91698.1| ribosomal protein L11 methyltransferase [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 347

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 21/135 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLV--------------------DSALAFSLPRIEKR 96
           W+ +Y+      S    P  E   L                      +AL   L     +
Sbjct: 150 WKQYYHPIEISDSLVICPEWEDYNLKPGQKMIKMNPGSAFGTGSHETTALCLKLLAENMK 209

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ILDLG G+G + +A  K         +DI   A+++ + N   N V+E+      +
Sbjct: 210 PTDLILDLGCGSGILAIAAAKLGGKS-ITAIDIDPLAVKVCQDNIRLNNVAEQVTASAGE 268

Query: 157 WFSSVEGLFDVIVSN 171
             S     FD+I+ N
Sbjct: 269 ISSLAGQKFDLILGN 283


>gi|223985837|ref|ZP_03635878.1| hypothetical protein HOLDEFILI_03184 [Holdemania filiformis DSM
           12042]
 gi|223962227|gb|EEF66698.1| hypothetical protein HOLDEFILI_03184 [Holdemania filiformis DSM
           12042]
          Length = 233

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 17/184 (9%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L    D F    +T LL +  +         R    +LDLG   GA+ L   + SP  
Sbjct: 24  LPLWQRKDMFCMNTDTVLLGEQMVV--------RKGESVLDLGCNNGALLLYASRFSPGS 75

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              GVD+  +AL +A  N   NG+    + + +D        FDVIV NPPY  +     
Sbjct: 76  -LTGVDLLPQALALAAENMRINGLEA--ELICADLAEFRHLPFDVIVCNPPYFATPDPAS 132

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           +        P ++      G +   T+     R L   G   +    ++   ++   ++ 
Sbjct: 133 INPN-----PFLATARHEAGCT-LETLFAAGGRLLKDKGRFYLVHRADRLAQIIAALQNS 186

Query: 243 KLFL 246
            L L
Sbjct: 187 PLTL 190


>gi|297197714|ref|ZP_06915111.1| ribosomal RNA small subunit methyltransferase [Streptomyces sviceus
           ATCC 29083]
 gi|297146838|gb|EFH28371.1| ribosomal RNA small subunit methyltransferase [Streptomyces sviceus
           ATCC 29083]
          Length = 384

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 26/155 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           + R   R++DLG G G V  A+   +   + + VD S +A+  A+     NGV    +  
Sbjct: 234 DSRGSQRVVDLGCGNGIVGTAVALANREAEVLFVDESFQAVASAEGTYKANGVPGHAEFR 293

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             D  + V +   D++++NPP+                             +    +   
Sbjct: 294 VGDGLAGVPKDSVDLVLNNPPFHSHQATTD---------------------ATAWRMFAD 332

Query: 213 VSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
             R L   G   V IG       V + ++F + +L
Sbjct: 333 ARRTLRPGGELWV-IGNRHLGYHVKLRKLFGNSQL 366


>gi|189200741|ref|XP_001936707.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187983806|gb|EDU49294.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 254

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 36/204 (17%)

Query: 70  DTFEPRPETELLV-------DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---- 118
             +EP  ++ LL+       ++A               +L++G G+G V   +       
Sbjct: 14  RVYEPAEDSYLLLDTLSSASETAYLQDRFGDASSIPPLVLEVGVGSGVVLAFVAANADTI 73

Query: 119 --SPFFKGVGVDISCKALEIAKSNA------VTNGVSERFDTLQSDWFSSV-EGLFDVIV 169
                   +GVDI+  A + A               S   D +  D  S++     DV +
Sbjct: 74  FGRHDVLALGVDINSFACKAAAQTVWGAIEEREKSRSVFVDIVNGDLASAIRPHSVDVFI 133

Query: 170 SNPPYIESVIVD-------CLGLEVRD---FDPRISL-----DGGIDGLSHYRTIADGVS 214
            NPPY+ + + D        +  E +D   F+    L      GG DG+     + D +S
Sbjct: 134 FNPPYVPAELPDPSNHKKYNVIPEGKDTTSFEQDSYLLELSYAGGEDGMVVTNRMLDQIS 193

Query: 215 RHLNKD-GLCSVEIGYNQKVDVVR 237
             L+KD G+  V +    K ++V+
Sbjct: 194 DILSKDRGVAYVLLCAQNKPELVK 217


>gi|239637610|ref|ZP_04678582.1| ribosomal protein L11 methyltransferase [Staphylococcus warneri
           L37603]
 gi|239596828|gb|EEQ79353.1| ribosomal protein L11 methyltransferase [Staphylococcus warneri
           L37603]
          Length = 312

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 13/118 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + + 
Sbjct: 172 KPQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVNVAKENFEKNHCLNAIEAVP 229

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +     +  FD++++N   I + I+D +  +  +           DG      I + 
Sbjct: 230 GNLLKDEKEHFDIVIAN---ILAHIIDEMIEDAYN-------TVNEDGYFITSGIIEE 277


>gi|90580618|ref|ZP_01236423.1| hypothetical 16S RNA G1207 methylase RsmC [Vibrio angustum S14]
 gi|90438276|gb|EAS63462.1| hypothetical 16S RNA G1207 methylase RsmC [Photobacterium angustum
           S14]
          Length = 340

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 30/169 (17%)

Query: 59  DFYNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           D   V+LT+      F          D      L  + K    ++LD G G G +   + 
Sbjct: 165 DIAGVQLTVRSLPGVFSHGEF-----DKGSELLLNNLPKLHG-KVLDFGCGAGVIGAVMK 218

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            + P       DIS  A+E AK     N +        +D + ++ G +  ++SNPP+  
Sbjct: 219 AKYPTIDLELCDISALAIESAKETFKVNNLEAS-KFTATDVYKTLTGPYQFLISNPPFHA 277

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     ++ F             +      +   ++L+ +G   +
Sbjct: 278 G---------LKTF------------YAATELFINDAPQYLSHNGQLVI 305


>gi|85705181|ref|ZP_01036281.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp. 217]
 gi|85670503|gb|EAQ25364.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp. 217]
          Length = 410

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              +R+LD+G G G + L L ++    +  GV +S +   IA   A   G+S+R     +
Sbjct: 174 EPGMRVLDIGCGWGGMGLTLARDF-GAQVTGVTLSKEQHGIANQRAEKAGLSDRVRFHLT 232

Query: 156 DWFSSVEGLFDVIVS 170
           D +  V+G FD IVS
Sbjct: 233 D-YREVKGQFDRIVS 246


>gi|229564351|sp|A4XQA3|RLMG_PSEMY RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 374

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +  D  R+ DLG G G + +A    SP  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSARENWAAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATIRAGDGLAEQPAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFQQARAALVTGGELWI-VGNRHLGYHAKLARLFR 356


>gi|262193421|ref|YP_003264630.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365]
 gi|262076768|gb|ACY12737.1| ribosomal L11 methyltransferase [Haliangium ochraceum DSM 14365]
          Length = 303

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 74/224 (33%), Gaps = 61/224 (27%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL-------------------------LVDSALAFSLP 91
           W++F++           P  E                            LV   L     
Sbjct: 91  WKEFFHTTYLTEHVVVVPSWEKHEAKPGEIVIHLDPGQAFGTGAHASTRLVLGELEALRA 150

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R    +V R  D+G G+G + +A     P   GV VDI   A +    N   NG+SER  
Sbjct: 151 R--GVEVQRCFDVGCGSGILFIAAAGMWPACSGVAVDIDPLAADATLENCERNGLSERVA 208

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
              +     V+G+FD++++N           +  +V                   R++A 
Sbjct: 209 VSTTP-TEEVDGVFDLVLAN-----------IQADVL------------------RSLAA 238

Query: 212 GVSRHLNKDGLCSVEIG--YNQKVDV-VRIFESRKLFLVNAFKD 252
            ++  +   G   +  G   +Q   V   +  +  L L++   D
Sbjct: 239 PLTARVAPGGHLVL-SGLLSHQAEAVGRDLAAAGGLELLHTRPD 281


>gi|315231428|ref|YP_004071864.1| LSU methyltransferase [Thermococcus barophilus MP]
 gi|315184456|gb|ADT84641.1| LSU methyltransferase [Thermococcus barophilus MP]
          Length = 396

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 65/195 (33%), Gaps = 36/195 (18%)

Query: 44  RSLKHES-IHRIL-GWRDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           R  +    I R+L G   +  +      +  +         +T   +D            
Sbjct: 160 RRREGLPEIERVLLGKEKYRTIIEEGKAKFIVDMR----GQKTGFFLDQRENRIALEKYI 215

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   ++LD+ T TG   +         K + +D S +A+E AK NA  NGV ++ + +  
Sbjct: 216 RGGEKVLDVFTYTGGFAIHAAVAGAE-KVIAIDKSPRAIEQAKENAKLNGVEDKMEFIVG 274

Query: 156 DWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             F  +E        FD+++ +PP       D                    GL  Y  +
Sbjct: 275 SAFPEMEKLQKRGEKFDIVILDPPAFVQHEKDL-----------------KRGLRAYFNV 317

Query: 210 ADGVSRHLNKDGLCS 224
                + +   G+  
Sbjct: 318 NYQGLKLVKDGGILV 332


>gi|148555871|ref|YP_001263453.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas
           wittichii RW1]
 gi|148501061|gb|ABQ69315.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingomonas
           wittichii RW1]
          Length = 408

 Score = 64.3 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +   R+LD+G G G + L L   +     +G+ +S + L++A+  A   GV
Sbjct: 167 AHIAAKLHLKPGQRVLDIGCGWGGMALYL-NRAADVDVLGITLSEEQLKVARERAAAAGV 225

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
           S+R      D + ++EG FD IVS
Sbjct: 226 SDRVRFELID-YRALEGKFDRIVS 248


>gi|330942318|gb|EGH44942.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 332

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|261840179|gb|ACX99944.1| hypothetical protein HPKB_1407 [Helicobacter pylori 52]
          Length = 238

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP-YIESVIVD 181
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP Y    I  
Sbjct: 60  SVHLVEKDGKMAFCSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 182 CLGLEVRD-FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +    R   +           L    ++   V + L   G    
Sbjct: 118 KIKGHARHQSE-----------LDFA-SLTAKVKKCLKPKGYFIF 150


>gi|206890120|ref|YP_002248963.1| methyltransferase small domain family [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742058|gb|ACI21115.1| methyltransferase small domain family [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 27/130 (20%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL    GA  + L K        G+D S KA+EIAK NA+ N V ++   +++D F  +
Sbjct: 217 LDLFCYVGAWSIHLAKR--GANITGIDSSEKAIEIAKQNAMLNNVQDKCRFIKADVFDYL 274

Query: 162 EG------LFDVIVSNPP-YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                    +D IV +PP +++S       +E      R++L                  
Sbjct: 275 RWEAKKGKKYDFIVVDPPAFVKSRQEKKDAIEGYVNLNRMAL------------------ 316

Query: 215 RHLNKDGLCS 224
           + L K+G+ +
Sbjct: 317 KLLRKNGILA 326


>gi|239907527|ref|YP_002954268.1| hypothetical protein DMR_28910 [Desulfovibrio magneticus RS-1]
 gi|239797393|dbj|BAH76382.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 266

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 54/165 (32%), Gaps = 21/165 (12%)

Query: 98  VVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
             R  DLGTG GA  L   L    P    +G+D     +  A  NA   G++ERF  L  
Sbjct: 49  GPRTADLGTGCGAAGLGCLLAGADPAATCLGLDRDPDMVRAAGQNAARLGLAERFTALAV 108

Query: 156 DW------FSSVEGLFDVIVSNPPYIESVI---VDCLGLEVRDFDPRISLDGGIDGLSHY 206
           D          +    D+++ NPPY +            E   F+         DG    
Sbjct: 109 DLRGIREDARCLPESCDLVICNPPYRDPASGRRPSGPAREAARFE--------TDG--DM 158

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              A   S  L   GL +      +   V      ++L +     
Sbjct: 159 TDFAAAGSYLLANKGLFACIHLAERLPLVFAALADKRLVVKRVLP 203


>gi|110669158|ref|YP_658969.1| adenine-specific DNA methyltransferase [Haloquadratum walsbyi DSM
           16790]
 gi|109626905|emb|CAJ53374.1| adenine-specific DNA methyltransferase [Haloquadratum walsbyi DSM
           16790]
          Length = 455

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 65/190 (34%), Gaps = 26/190 (13%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-----SPFFKGVGV 127
            P P+   L D  +          D  RIL  G G G    A+ +       P  +GV V
Sbjct: 5   VPTPDR--LADKMVEKLFRDNPPEDGERILYPGCGRGPFISAVHRYCDSNDFPVPEGVAV 62

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE--SVIVDCL 183
           +I  +  E A+         +  + L+ D+ +  +G   F+ ++ NPPYI    +  D  
Sbjct: 63  EIDPELYEDARK----RHKDKEVEFLERDFLTDSDGLDKFEYVLGNPPYIPIEGLEEDEK 118

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-----VDVVRI 238
           G   R+F+              Y    +     L+  G          +       + R+
Sbjct: 119 GRYRREFETAEGRF------DLYVLFFEQAIDLLSSGGRLCFVTPEKFEYTETTAALRRV 172

Query: 239 FESRKLFLVN 248
             S  +  ++
Sbjct: 173 LASSGVEEIH 182


>gi|157130331|ref|XP_001655665.1| hypothetical protein AaeL_AAEL011749 [Aedes aegypti]
 gi|108871917|gb|EAT36142.1| conserved hypothetical protein [Aedes aegypti]
          Length = 305

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   +LDLG G G + +           VGV+I   A+EI K N   
Sbjct: 132 HMLYTIQTNYDDLENKLVLDLGCGAGMLSVGAAL-LGAAHVVGVEIDADAIEIFKGNIEG 190

Query: 144 NGVSERFDTLQSDWFS----SVEGLFDVIVSNPPY 174
             + +  D +Q D         E  FD ++ NPP+
Sbjct: 191 FEL-DNVDCIQWDVLGMEDIDFEHKFDTVLMNPPF 224


>gi|157107434|ref|XP_001649776.1| RNA m5u methyltransferase [Aedes aegypti]
 gi|108884062|gb|EAT48287.1| RNA m5u methyltransferase [Aedes aegypti]
          Length = 625

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 15/120 (12%)

Query: 38  LTNAIVRSLKHE---SIHRILGWRDF----YNVRLTLSSDTF--EPRPETELLVDSALAF 88
               I +    +    +  + G        + ++  +S   F     P  E+L   A+  
Sbjct: 364 YLEKIGKRESGQTVNPVEHLHGETHIVDVIHGLKFRISPLAFFQINTPSAEVLYQCAIDL 423

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +    +      +LD+  GTG + L   K     + +GV++  +A+E AK NA  N +  
Sbjct: 424 A----DATQQTSVLDICCGTGTIGLCFAKHCK--QVLGVELIPQAIEDAKYNAELNKIDN 477


>gi|91214962|ref|ZP_01251934.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC
           700755]
 gi|91186567|gb|EAS72938.1| hypothetical protein P700755_11732 [Psychroflexus torquis ATCC
           700755]
          Length = 238

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 4/97 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  +I +  V  ILD+G GTG + L + + S       V+I   A E    N  
Sbjct: 24  DAVLLGAWTKIPE-TVQSILDVGAGTGILALQMAQRSFAETIDAVEIDPDAFEECVDNFE 82

Query: 143 TNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYIE 176
            +   +R     SD+      +E  +D+I+SNPP+ E
Sbjct: 83  NSPWGDRLYCYHSDFHSFAEEMEETYDLIISNPPFFE 119


>gi|325955396|ref|YP_004239056.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Weeksella virosa DSM 16922]
 gi|323438014|gb|ADX68478.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Weeksella virosa DSM 16922]
          Length = 244

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 30/150 (20%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I++     +LD+ TGTG + + + K +   K  G+D+S   LE+ +       +  R + 
Sbjct: 55  IQQTKPETVLDIATGTGDLAIMMAKHT-NAKITGLDLSAGMLEVGRKKVAMEKLQNRIEL 113

Query: 153 LQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           +  D       +  FD +              +   VR+F+          GL+  R + 
Sbjct: 114 ILGDSENLPFPDNSFDCV-------------TVSFGVRNFENL------KKGLAEIRRV- 153

Query: 211 DGVSRHLNKDG-LCSVEIGYNQKVDVVRIF 239
                 L   G    +E  Y  K  + +++
Sbjct: 154 ------LKPGGTFVILEFSYPSKFPMKQLY 177


>gi|146296761|ref|YP_001180532.1| ribosomal protein L11 methyltransferase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223403|sp|A4XKA6|PRMA_CALS8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|145410337|gb|ABP67341.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 302

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A  K+    + + VDI   A+++A+ NA  N V    +  Q+
Sbjct: 167 KPGFDVIDIGTGSGILAIA-AKKLGANRVLAVDIDDVAVKVARENAALNNVE--IEIKQN 223

Query: 156 DWFSSVEGLF 165
           D    +E  F
Sbjct: 224 DLVFGIEEKF 233


>gi|217034302|ref|ZP_03439719.1| hypothetical protein HP9810_885g33 [Helicobacter pylori 98-10]
 gi|216943274|gb|EEC22739.1| hypothetical protein HP9810_885g33 [Helicobacter pylori 98-10]
          Length = 238

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +RL    + +    ++  L D        R   ++   ILD+G+G G + L   +++P  
Sbjct: 6   LRLYQPLNAYSYNSDSLFLYD------FSRPFIKNSGAILDIGSGCGVLGLLCARDNPLA 59

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               V+   K    ++ NA+    ++ F++   D+   +  L+D IV NPP+     +  
Sbjct: 60  SVHLVEKDSKMAFFSQKNALKFPNAQVFESDFLDFNPPI--LYDAIVCNPPFYALGSIKS 117

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +           + ++   V + L   G    
Sbjct: 118 KNKGHARHQSEL----------DFASLVAKVKKCLKPKGYFIF 150


>gi|119945956|ref|YP_943636.1| rRNA (guanine-N(2)-)-methyltransferase [Psychromonas ingrahamii 37]
 gi|229564338|sp|A1SX22|RLMG_PSYIN RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|119864560|gb|ABM04037.1| rRNA (guanine-N(2)-)-methyltransferase [Psychromonas ingrahamii 37]
          Length = 382

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 34/177 (19%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F +  + K D  +++DLG G G + +A     P  +   +D S  +++ A+ N   N   
Sbjct: 225 FLMDNLPKGDFSKVVDLGCGNGIIGMAASAAYPKAQITFIDESYMSIDSARINMQKNLPE 284

Query: 148 ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           E+ +  +    + + G     +D+I+ NPP+ +   +                       
Sbjct: 285 EQAENARFVVNNGLVGFKPRSYDLILCNPPFHQQQTITD--------------------- 323

Query: 204 SHYRTIADGVSRHLNKDGLCSVE--IGYNQKVDVVRIF-------ESRKLFLVNAFK 251
               ++ +     L  +G   +      N +  + RIF       +++K  ++ A K
Sbjct: 324 QIAWSMFNDAHFCLVDNGELVIVGNHHLNYQDKLERIFGNCEIVSQNKKFVILRAVK 380


>gi|241889707|ref|ZP_04777005.1| ribosomal protein L11 methyltransferase [Gemella haemolysans ATCC
           10379]
 gi|241863329|gb|EER67713.1| ribosomal protein L11 methyltransferase [Gemella haemolysans ATCC
           10379]
          Length = 311

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 37/152 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G+G + +A            VD+   A++++  N   N + +R +  Q+   + 
Sbjct: 179 VIDVGCGSGILSIA-ASYLTDGNIKAVDLDKLAVDVSYENFALNNLEKRIEVDQASLLTK 237

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +++IVSN               +                     + D     L   
Sbjct: 238 ETKKYNIIVSN---------------ILAH--------------IIELMIDDAYNLLEDG 268

Query: 221 GLC----SVEIGYNQKVDVVRIFESRKLFLVN 248
           G       +E    +K +++     R   LV 
Sbjct: 269 GYYITSGIIE---EKKDELLEKMLERGFKLVE 297


>gi|28895699|ref|NP_802049.1| hypothetical protein SPs0787 [Streptococcus pyogenes SSI-1]
 gi|28810948|dbj|BAC63882.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
          Length = 258

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 21/176 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  + +  I+DL +G GAV L           V V++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKMPSKGL--IVDLCSGNGAVGL-FASTRTKAAIVEVELQKRLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + +  +     D+++ NPPY +S       +         +  
Sbjct: 90  QLNQLEDQVTMICDDLKNLLNHVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +L            I       L  +G  ++    ++ ++++    +  L     
Sbjct: 150 TNL----------EEICQVARHALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 195


>gi|85711852|ref|ZP_01042907.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145]
 gi|85694249|gb|EAQ32192.1| Ribosomal protein L11 methylase [Idiomarina baltica OS145]
          Length = 293

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 51/214 (23%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALA----------FSLPRIEK--RDVVRILDLGT 106
           +  RL +       P P+   +L+D  +A            L  ++   +   +I+D G 
Sbjct: 108 FGRRLWICPSWRDIPEPDAVNILLDPGMAFGTGTHPTTAMCLEWLDAHVKGNEQIVDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +      +G+DI  +AL   + NA  N V+++FD    +   ++    D
Sbjct: 168 GSGILGIA-ALKLGSAHALGIDIDKQALISTQENAERNHVADKFDVYLPEQHPNL--QAD 224

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
           ++++N                        L G        R +A  +   +   G   + 
Sbjct: 225 IVLANV-----------------------LAGP------LRELAHVIKEFVKPGGRLVLS 255

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKD----YGG 255
            I   Q   V+  +     F     +D      G
Sbjct: 256 GILARQAQSVMDAYAPEIKFETPTQQDEWIMLAG 289


>gi|317501336|ref|ZP_07959539.1| hypothetical protein HMPREF1026_01483 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088372|ref|ZP_08337291.1| hypothetical protein HMPREF1025_00874 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316897300|gb|EFV19368.1| hypothetical protein HMPREF1026_01483 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330408616|gb|EGG88082.1| hypothetical protein HMPREF1025_00874 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 219

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 42/188 (22%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++     +IL++G G+GA+ +      P  K +GVD    A+      
Sbjct: 35  IMEQVHRVVLSHLDYDGEGKILEVGCGSGALTIRSALTWPKAKVIGVD-HWGAVYNYSKA 93

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + + NA   GV+ R      D       +  FDV++SN  Y+   ++             
Sbjct: 94  LCEKNAAREGVASRCVFQHGDAKQLDFPDESFDVVISN--YVYHNVM------------- 138

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-------VRIFESRKLFL 246
                G D     + +     R L K G+ ++    + K  +        +         
Sbjct: 139 -----GAD----MQKLLLESLRVLKKGGVFAL--NDDMKPKMYGDMEGFAQKLRDMGYEE 187

Query: 247 VNAFKDYG 254
           V    D  
Sbjct: 188 VRLV-DIA 194


>gi|291531850|emb|CBK97435.1| Predicted O-methyltransferase [Eubacterium siraeum 70/3]
          Length = 245

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 22/171 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK- 117
           D    ++ +S D      +  LL D A        +     ++ DL TG G V L + + 
Sbjct: 9   DLSGTKIYVSEDH-RFGTDAFLLADFA--------DPAPHHKVCDLCTGCGIVPLIMCRN 59

Query: 118 --ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP 172
             + P  +  GV+I  +A+E+   +   N +S+R   +  D           FD++  NP
Sbjct: 60  ISKKPPKEIYGVEIMPEAVELFDKSVAENNLSDRIKPVLCDLKDPQGVPREYFDIVTVNP 119

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           PY +         E R  D + +     + L +   +    S  L   G  
Sbjct: 120 PYWKKG-----SGEERLSDAQAA--ARHEILCNIDDVMKTASSLLKFGGSL 163


>gi|269797677|ref|YP_003311577.1| methyltransferase small [Veillonella parvula DSM 2008]
 gi|269094306|gb|ACZ24297.1| methyltransferase small [Veillonella parvula DSM 2008]
          Length = 241

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 21/198 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   SD F    +   L+         R   R     +DLGTGTG + L +      
Sbjct: 14  GLQIYQRSDMFRFSFDAIALIH------FCRFNGRHSY--VDLGTGTGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGL-FDVIVSNPPYIE 176
               G++I+   +E+AK +   N   +  + L  D+    +  ++   FD ++ NPP+ +
Sbjct: 65  GHITGIEINETLVELAKRSVEHNRKQDVVNMLCGDYRHMTYRDIQDKPFDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E R+    ++L  G   L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSEERN----LALHDGHTTLCD---VLKAVQSFIKCKGRLWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAFKDYG 254
              E            YG
Sbjct: 178 HELERFNFQAKRIRFVYG 195


>gi|225861587|ref|YP_002743096.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|307127981|ref|YP_003880012.1| 50S ribosomal protein L11 methyltransferase [Streptococcus
           pneumoniae 670-6B]
 gi|254783320|sp|C1CT24|PRMA_STRZT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225727731|gb|ACO23582.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|306485043|gb|ADM91912.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           670-6B]
 gi|327389951|gb|EGE88296.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA04375]
 gi|332200329|gb|EGJ14402.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA47368]
          Length = 316

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|330887823|gb|EGH20484.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 232

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++    
Sbjct: 77  DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 136

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 137 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 178

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 179 -----NLLRKARQHLKSGGEL 194


>gi|59711330|ref|YP_204106.1| methyltransferase small subunit [Vibrio fischeri ES114]
 gi|75354401|sp|Q5E6X8|RLMG_VIBF1 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|59479431|gb|AAW85218.1| predicted methyltransferase small domain [Vibrio fischeri ES114]
          Length = 382

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 28/171 (16%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  I     +R I+DLG G G + +   + +P  +   VD S  A+E A  N 
Sbjct: 216 DQGARFMLDHIPSDPELRHIIDLGCGNGVLSVKAGQLNPEARITCVDESFMAVESAHRNL 275

Query: 142 VTN-GVSERFDTLQSDWFSSVEGLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N G   +F  + ++     +     +V  NPP+ +   +             I+    
Sbjct: 276 EVNLGKERQFQFIANNCLDGFKKHSSYLVLCNPPFHQGQAITD----------HIAW--- 322

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESRKLFLV 247
                    +       L KDG   V IG         + R+F    +  V
Sbjct: 323 --------QMFCDAKHILCKDGKLLV-IGNRHLDYDGKLCRLFGEENVTTV 364


>gi|332638182|ref|ZP_08417045.1| ribosomal protein L11 methyltransferase [Weissella cibaria KACC
           11862]
          Length = 318

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 37/170 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L+  AL   +     R   R+LD+GTG+G + +A  K       +G DI   A+  
Sbjct: 160 PTTRLMMQALEIVI-----RGEERLLDVGTGSGVLGIA-AKLLGASSVLGTDIDEVAVRS 213

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A+ N   N ++     + SD    V    FD++V+N           +  EV        
Sbjct: 214 AQGNLDLNPIASDIKVMASDLLQDVPAQEFDIVVAN-----------MLAEVLV------ 256

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                        +   V   L   G   +  I  ++   +V   E+   
Sbjct: 257 ------------PLIPQVESVLRPGGKFLLSGIYQDKADVIVAKLEASGY 294


>gi|73995903|ref|XP_534759.2| PREDICTED: similar to HpaII tiny fragments locus 9C [Canis
           familiaris]
          Length = 667

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +   L    L   +    +      +
Sbjct: 421 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTLAAEVLYTVIQDWAQLDTGSTV 477

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL       + VG+++  +A+E A+ NA  N +S   +         V
Sbjct: 478 LDVCCGTGTIGLALAPRVK--RVVGIELCQEAVEDARVNARDNELS-NVEFHCGRAEDLV 534

Query: 162 EGLFDVIVS 170
             L   + S
Sbjct: 535 PALVSRLAS 543


>gi|253574634|ref|ZP_04851974.1| 50S ribosomal protein L11 methyltransferase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251845680|gb|EES73688.1| 50S ribosomal protein L11 methyltransferase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 322

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 67/204 (32%), Gaps = 35/204 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR--------------DVVRILDLGTGT 108
           + +  + + + P    E +++     +                     +   ++D+GTG+
Sbjct: 127 LTIKPTWEEYVPVSPNEQIIELDPGMAFGTGTHPTTSLCLRTLESIIQEGDEVIDVGTGS 186

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + +         K + +D+   A+  AK N   NG+ +R   ++SD  S ++G     
Sbjct: 187 GILAIG-ACRLGASKVLALDLDPVAVSSAKENTRLNGLEDRIQVVESDLLSVLKGE---- 241

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEI 227
                   + +   L + V      ++               + V + L   G   +  I
Sbjct: 242 ------GSTGVEIKLPVRVVVA-NILA--------EIILLFIEDVYQALAPGGYYIASGI 286

Query: 228 GYNQKVDVVRIFESRKLFLVNAFK 251
             N++  V     +    L    +
Sbjct: 287 YKNKEQAVQEALIAAGFELERTAR 310


>gi|242398066|ref|YP_002993490.1| Predicted DNA methylase [Thermococcus sibiricus MM 739]
 gi|242264459|gb|ACS89141.1| Predicted DNA methylase [Thermococcus sibiricus MM 739]
          Length = 205

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 3/110 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L +    +   +   I DLG GTG + +         K   V+   KALEIAK NA
Sbjct: 32  VAAELLWLAHSMGDIEGKIIADLGAGTGVLSIG-ASLMGAKKVYAVEKDKKALEIAKENA 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            T  +    + L+       +   D ++ NPP+            ++ F+
Sbjct: 91  ETLNIK-NIEFLEVSV-KEFDARVDTVIMNPPFGSQNPKADRPFLLKAFE 138


>gi|330466469|ref|YP_004404212.1| methyltransferase small [Verrucosispora maris AB-18-032]
 gi|328809440|gb|AEB43612.1| methyltransferase small [Verrucosispora maris AB-18-032]
          Length = 494

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 11/108 (10%)

Query: 75  RPETELLVDSAL------AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           RP   L  +  L         +    +R V   LDLGTG+G   L L   +   +    D
Sbjct: 127 RPGRPLHAEHVLGIGGATQTMIGAAVRRPVETALDLGTGSGVQALHLSTHAR--QVTATD 184

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYI 175
           +S +AL  A + A  NG    ++ L+ D  + V G  FD++VSNPP++
Sbjct: 185 VSRRALRFAATTAALNGQD--WELLRGDMVAPVAGRRFDLVVSNPPFV 230


>gi|302189124|ref|ZP_07265797.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. syringae 642]
          Length = 332

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|86607113|ref|YP_475876.1| ribosomal protein L11 methyltransferase [Synechococcus sp.
           JA-3-3Ab]
 gi|86555655|gb|ABD00613.1| ribosomal protein L11 methyltransferase [Synechococcus sp.
           JA-3-3Ab]
          Length = 261

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 34/176 (19%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   AL   L      + V + D+G G+G + +A        +   VDI   A++ 
Sbjct: 107 PTTQLCLEALEMRLGA--GTEGVTVADVGCGSGILSVAAALLGAK-RVFAVDIDPLAVQA 163

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
              N   NG+++R    Q      +  + D +V N   I + ++  +  E          
Sbjct: 164 TLHNRDLNGLTDRIVVAQGSL-EHIPEMVDGLVCN---ILTDVILDMIPEF--------- 210

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
                GL               K G   +  I   Q   V  + E+ +  +   ++
Sbjct: 211 -----GLVV------------KKGGWLILSGILLEQAKLVAEMLEANEWAVAALWR 249


>gi|17229505|ref|NP_486053.1| hypothetical protein all2013 [Nostoc sp. PCC 7120]
 gi|17131103|dbj|BAB73712.1| all2013 [Nostoc sp. PCC 7120]
          Length = 239

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 39/169 (23%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                     PR +  L     +   LP   +    RILDLG GTG + L +L+  P  +
Sbjct: 15  DFDTGIRQLLPRYDEML---EVICRCLPLTSR----RILDLGCGTGELSLKILQRCPDAQ 67

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--------SVEGLFDVIVSNPPYI 175
            + +D S + L+ A++  V +G  ER+  LQ+D+          ++   FD  VS     
Sbjct: 68  VIALDYSPRMLKFAQNKIVASGYKERWTGLQADFGDWAINPETLNIGNEFDACVS----- 122

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            S+ +  L  E++              L  ++ IA      L  +G   
Sbjct: 123 -SLAIHHLYDEMK--------------LQLFQRIAAS----LTPNGCFW 152


>gi|332637903|ref|ZP_08416766.1| hypothetical protein WcibK1_04354 [Weissella cibaria KACC 11862]
          Length = 253

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 20/171 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  +  K      +DLG G GAV L +  +    + VGV+I  +  ++A  +  
Sbjct: 33  DAVLLANFAQPRKNGRGLNVDLGAGNGAVSLFMAHKVAG-QIVGVEIQERLADMATRSVQ 91

Query: 143 TNGVSERFDTLQS---DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE-----VRDFDPR 193
            N ++++   +     D F+ +  G  D++VSNPPY      + +  E     +   + +
Sbjct: 92  MNDLTDKITIINKDMRDIFTDIRPGSADMVVSNPPYFTVDNENTVMHEDEHYAIARHEIK 151

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             LD           +     + L       +    ++  +++   +   L
Sbjct: 152 ADLD----------LVTYTAKKLLKNKAHFFMVHRPDRLFEILESLQKNHL 192


>gi|322383636|ref|ZP_08057387.1| ribosomal protein L11 methyltransferase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321151848|gb|EFX44791.1| ribosomal protein L11 methyltransferase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 333

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 46/218 (21%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELL-------------VDSALAFSLPRIEKR 96
           W+ ++        + +  + + +EP  +  +L               ++L   +     R
Sbjct: 125 WKKYFKPIRVTKRLTIKPTWEEYEPSTDEIILELDPGMAFGTGTHATTSLCLKILEQVVR 184

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D+GTG+G + +A  K       + +D+   A++ A  N+  NG+  R    QSD
Sbjct: 185 GGEDVIDVGTGSGILSIAAAKLGAE-HVLAIDLDPVAVKSAGENSKLNGMQSRIMVRQSD 243

Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +E     D +          +   + + V +    ++               + V 
Sbjct: 244 LLGILEHSEKRDEL---------NVKMPVQIVVANI---LA--------EIILLFVEDVY 283

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAF 250
           + L   GL  V   I   Q V V    +     +V   
Sbjct: 284 QVLEPGGLYIVSGVIRAKQAV-VEDALKRAGFEIVEIH 320


>gi|296191372|ref|XP_002743598.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A [Callithrix
           jacchus]
          Length = 621

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 17/138 (12%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRI 101
           +   +  + G R    D   +   +S   F        L    L   +    + D    +
Sbjct: 377 EGLPLEHVAGDRCIHEDLLGLTFRISPHAF----FQVTLAAEVLYTIIQDWSQLDADSTV 432

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + L L ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 433 LDVCCGTGTIALLLFQKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 490

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 491 ALVSRLASQHLVAILDPP 508


>gi|157151259|ref|YP_001451093.1| ribosomal protein L11 methyltransferase [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157076053|gb|ABV10736.1| ribosomal protein L11 methyltransferase [Streptococcus gordonii
           str. Challis substr. CH1]
          Length = 318

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIEADVIVAN---------------------ILA--------DILVHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|326202056|ref|ZP_08191926.1| ribosomal protein L11 methyltransferase [Clostridium papyrosolvens
           DSM 2782]
 gi|325987851|gb|EGD48677.1| ribosomal protein L11 methyltransferase [Clostridium papyrosolvens
           DSM 2782]
          Length = 316

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  ++LD+G GTG + + +  +        +DI   A+++AK N   N  + +    ++
Sbjct: 173 KDDTQVLDIGCGTGILSI-IAAKLGAKTVEAIDIDEVAVKVAKENIELNEETSKVSVYKA 231

Query: 156 DW--FSSVEGLFDVIVSN 171
                   E  +D+IV+N
Sbjct: 232 ILSDLKQEEQKYDIIVAN 249


>gi|292493568|ref|YP_003529007.1| methyltransferase type 11 [Nitrosococcus halophilus Nc4]
 gi|291582163|gb|ADE16620.1| Methyltransferase type 11 [Nitrosococcus halophilus Nc4]
          Length = 231

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      + ++   +  RILDL  GTG   LA+    P  + VGV++  + L IA+   
Sbjct: 33  IDRLWKRKMVKMMPPNPRRILDLACGTGISTLAIANRYPDCQVVGVELREEYLNIARRKI 92

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              GV+     L        +  FD I S+  Y+                          
Sbjct: 93  QKLGVNNIEWVLSRAEDYRSKEPFDCISSS--YLAK------------------------ 126

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +  + +       L + GL  +
Sbjct: 127 -YADLKALTHSSKTMLKEGGLLLM 149


>gi|291543369|emb|CBL16478.1| Predicted O-methyltransferase [Ruminococcus sp. 18P13]
          Length = 240

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 12/146 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  R + RDV    DLGTG G + L + +  P  +  G+DI  +A+ + +    
Sbjct: 24  DAFLLAAFSRYQARDVA--CDLGTGCGIIPLVMERHMPPRQIYGLDIQPEAIRLLEQTVA 81

Query: 143 TNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N ++        L++ W  +      ++  NPPY           +        +    
Sbjct: 82  ENRLTNLTPVLGDLRTLWADAPLEQCTLVTCNPPYKAQGAGMESAGDA-------ARIAR 134

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            + L     +    +R L   G   +
Sbjct: 135 HELLCDISDVCGSAARLLRFGGRLCL 160


>gi|239832294|ref|ZP_04680623.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium
           LMG 3301]
 gi|239824561|gb|EEQ96129.1| ribosomal protein L11 methyltransferase [Ochrobactrum intermedium
           LMG 3301]
          Length = 285

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +        LDLGTG+  + +A+ K +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVTSEHPTNALDLGTGSAVLAIAIAKLAPIP-VLATDIDPVAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHAIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSLKEHLASGGSIILSGILDSQHDAVLAAYQAQGLTHQKTL 274


>gi|73661501|ref|YP_300282.1| SAM-dependent methyltransferase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|72494016|dbj|BAE17337.1| putative SAM-dependent methyltransferase [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 240

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  ++ILD+GTG G + +            G+D+S + ++ AK NA ++     F  + +
Sbjct: 44  QPGMKILDIGTGAGFLAILCGNLGSD--VTGIDLSPEMIQSAKQNAESHHQDIHFQVMDA 101

Query: 156 DWFSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISL---DG--GIDGLSHYRTI 209
           +     +  FD+++S N  ++           +R   P   L   D   G D  + Y+++
Sbjct: 102 ESLQFNDETFDMVISRNVTWLLPNTKAAYQEWLRVLKPNGKLINIDANYGNDSFTDYKSL 161


>gi|86138631|ref|ZP_01057204.1| hypothetical protein MED193_22326 [Roseobacter sp. MED193]
 gi|85824691|gb|EAQ44893.1| hypothetical protein MED193_22326 [Roseobacter sp. MED193]
          Length = 408

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 53/154 (34%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +           +LD+ +  G   LA+           VD S  AL++A
Sbjct: 214 TGLFYDQRENHAFAARLVPQGGDVLDVFSHVGGFGLAMRAAGAG-TVTCVDGSSAALDLA 272

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-----EGL-FDVIVSNPPYIESVIVDCLGLEVRDFD 191
              A  +G  + F   Q D F  +     EG  FDV++ +PP                  
Sbjct: 273 GQGAQASGFGDSFMARQGDAFEQLAALAEEGRSFDVVICDPPAFAPS------------- 319

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +L+    GL  Y  IA   +  +   G   +
Sbjct: 320 -KQALEA---GLRAYERIAKLAAPLVKPGGYLGL 349


>gi|297461681|ref|XP_002701792.1| PREDICTED: HpaII tiny fragments locus 9C [Bos taurus]
          Length = 606

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           +   +  + G R    D   +   +S   F  +  T    +          +      +L
Sbjct: 361 EGLPLEHVAGDRCIREDVLGLTFRISPHAF-FQVNTAA-AEVLYTLIQDWAQLDAGSTVL 418

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+  GTG + LAL ++    + VGV++S +A+E A+ NA+ N +S   +         V 
Sbjct: 419 DVCCGTGTIGLALARKVK--RVVGVELSQEAVEDARVNALDNELS-NVEFHCGRAEELVP 475

Query: 163 GLFDVIVS 170
            L   + S
Sbjct: 476 ALVSRLAS 483


>gi|149758689|ref|XP_001488208.1| PREDICTED: similar to HpaII tiny fragments locus 9C [Equus
           caballus]
          Length = 633

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 18/156 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 388 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDTGSTV 444

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  GTG + LAL ++    + VG+++  +A+E A+ NA  N +S       R + L  
Sbjct: 445 LDVCCGTGTIGLALARKVK--RVVGIELCQEAVEDARVNARDNELSNVEFHCGRAEDLVP 502

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
              S +     V V +PP   + +   + L VR  +
Sbjct: 503 TLVSRLASQQLVAVLDPP--RAGLHSKVILAVRKAE 536


>gi|289773255|ref|ZP_06532633.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           lividans TK24]
 gi|289703454|gb|EFD70883.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           lividans TK24]
          Length = 377

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 26/149 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 236 RVVDLGCGNGVVGTAVALADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 295

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V +G  D++++NPP+                             +    +  G  R L 
Sbjct: 296 GVPDGSVDLVLNNPPFHSHQATTD---------------------ATAWRMFTGARRVLR 334

Query: 219 KDGLCSVEIGYNQ---KVDVVRIFESRKL 244
             G   V +G       V + R+F + +L
Sbjct: 335 PGGELWV-VGNRHLGYHVRLRRLFGNSEL 362


>gi|294673744|ref|YP_003574360.1| 50S ribosomal protein L11 methyltransferase [Prevotella ruminicola
           23]
 gi|294472251|gb|ADE81640.1| ribosomal protein L11 methyltransferase [Prevotella ruminicola 23]
          Length = 280

 Score = 64.3 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LD GTGTG + +    +    + VG DI   +++ A+ NAV N V +RF +L  D   
Sbjct: 145 RVLDCGTGTGILSI-CALKLGATEAVGYDIDEWSVDNARHNAVINRVDDRFTSLLGDAKI 203

Query: 158 FSSVEGLFDVIVSN 171
             +++  FD++++N
Sbjct: 204 LENIDEKFDIVLAN 217


>gi|304439564|ref|ZP_07399469.1| ribosomal protein L11 methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371943|gb|EFM25544.1| ribosomal protein L11 methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 304

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 4/86 (4%)

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           G G+G + +A  K     + V VD+  K +E +  NA  NGV ++ +    +    V+G 
Sbjct: 173 GCGSGILGIAAAKLGAK-EIVAVDLDEKCVETSIENAKLNGVDDKMEVHLGNLLDVVDGT 231

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDF 190
            ++IVSN   I + I+  L  ++R+ 
Sbjct: 232 ANIIVSN---IIAEIITGLVFDLREH 254


>gi|114705922|ref|ZP_01438825.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi
           HTCC2506]
 gi|114538768|gb|EAU41889.1| ribosomal protein L11 methyltransferase [Fulvimarina pelagi
           HTCC2506]
          Length = 288

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 35/165 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      I ++    +LDLGTG+  + +   K       +  DI   A+++A+ NA  NG
Sbjct: 137 LQLIGEEIRRKRPKAVLDLGTGSAVLAIGAAK-LGRLPVLATDIDPVAVDVARQNAGANG 195

Query: 146 VSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           VS   D   +  F S +    G FD+IV+N   + +  +  +  +               
Sbjct: 196 VSRLVDVAIATGFRSPKIRERGPFDLIVAN---VLAGPLKAMSPDF-------------- 238

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
                       +RHL   G   +  I  +Q+  V+  F ++ L+
Sbjct: 239 ------------ARHLAPRGRIILSGILTHQRRSVLAAFSNQGLY 271


>gi|94495795|ref|ZP_01302374.1| cyclopropane fatty acid synthase [Sphingomonas sp. SKA58]
 gi|94424487|gb|EAT09509.1| cyclopropane fatty acid synthase [Sphingomonas sp. SKA58]
          Length = 413

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 27/157 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +  +++LD+G G G + L L   +      G+ +S + L++A+  A   GV
Sbjct: 171 AHIAAKLHLKPGMKVLDIGCGWGGMALYL-HRTCGVDVTGITLSEEQLKVARQRAQNAGV 229

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++       D +  + G FD IVS                V  F+          G +H+
Sbjct: 230 ADHVRFELID-YRDMTGPFDRIVS----------------VGMFE--------HVGTAHF 264

Query: 207 RTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESR 242
           RT  +     L  DG+  +  IG      +   F  +
Sbjct: 265 RTFYNKCRELLAPDGVMLIHTIGRVDGPGITDAFTQK 301


>gi|257125478|ref|YP_003163592.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis
           C-1013-b]
 gi|257049417|gb|ACV38601.1| ribosomal protein L11 methyltransferase [Leptotrichia buccalis
           C-1013-b]
          Length = 310

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 27/155 (17%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRP-ETELLVDSALAFSLPRIEK------------R 96
           W+ +++       + +  S D +EP   E  + +D  LAF     E             +
Sbjct: 109 WKKYFHTVNITDNIVIKPSWDEYEPESNEIVIEIDPGLAFGTGTHETTSLCVEFLEKYVK 168

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+G G+G + L + K+    K VG+DI  K  ++   N   NG+++ F+ +  +
Sbjct: 169 GKEKLLDIGCGSGILML-IGKKLGVKKVVGIDIDEKVRDVVLENFSKNGINDDFEVIIGN 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
               V G +D++VSN      ++VD L   + D +
Sbjct: 228 LVDDVNGKYDLVVSN------ILVDVLEKLLEDIE 256


>gi|197116641|ref|YP_002137068.1| ribosomal protein L11 methyltransferase [Geobacter bemidjiensis
           Bem]
 gi|226710086|sp|B5E9X4|PRMA_GEOBB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|197086001|gb|ACH37272.1| ribosomal protein L11 methyltransferase [Geobacter bemidjiensis
           Bem]
          Length = 306

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 31/150 (20%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T++ +++           +    +LD+GTG+G + +A        + V VDI  +A+ 
Sbjct: 150 PTTKMCLEALERICFDASGGKLPSPVLDVGTGSGVLSIAAALLGAK-EIVAVDIDPEAVR 208

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +   N   NGV++      +     + G F V+V+N           L  E+        
Sbjct: 209 VTMENLELNGVADLVAASTTSL-EQLPGGFRVVVAN----------ILAEELV------- 250

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +AD ++  +   G   +
Sbjct: 251 ------------RLADELTARVAPGGWLIL 268


>gi|163843672|ref|YP_001628076.1| ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445]
 gi|189037692|sp|B0CHK5|PRMA_BRUSI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|163674395|gb|ABY38506.1| Ribosomal protein L11 methyltransferase [Brucella suis ATCC 23445]
          Length = 285

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVQTEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  +  HL   G   +  I  +Q   V+  ++++ L      
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQTQGLTHQKTL 274


>gi|221232522|ref|YP_002511675.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           ATCC 700669]
 gi|298230705|ref|ZP_06964386.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           str. Canada MDR_19F]
 gi|298255500|ref|ZP_06979086.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           str. Canada MDR_19A]
 gi|298503512|ref|YP_003725452.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|254783316|sp|B8ZMW2|PRMA_STRPJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|220674983|emb|CAR69560.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           ATCC 700669]
 gi|298239107|gb|ADI70238.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           TCH8431/19A]
          Length = 316

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|224129814|ref|XP_002328809.1| methionine s-methyltransferase [Populus trichocarpa]
 gi|222839107|gb|EEE77458.1| methionine s-methyltransferase [Populus trichocarpa]
          Length = 1095

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 34/222 (15%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G+R    + + +    F P   +    +  L      I K     + +LG G G + +A
Sbjct: 78  MGYRGRKKLTMMVIPSIFMPENWSFTFYE-GLNRHPDSIFKDKT--VAELGCGNGWISIA 134

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNG---------------VSERFDTLQSDWFS 159
           L ++    K  G+DI+ +A++++  N   N                + +R +  +SD  S
Sbjct: 135 LAEKWLPSKVYGLDINPRAVKVSWINLYLNAFDEKGQVIYDAEKKTLLDRVEFYESDLLS 194

Query: 160 SVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLS 204
            +       + IV   P I +   D +   + +              +L G ++   GL 
Sbjct: 195 YIRDHNIELERIVGCIPQILNPNPDAMSKMITENASEEFLHSLSNYCALQGFVEDQFGLG 254

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR-IFESRKLF 245
                 +     +   G+    +G      V + +FE R   
Sbjct: 255 LIARAVEEGIAVIKPMGIMIFNMGGRPGQAVCKHLFERRGFH 296


>gi|220909310|ref|YP_002484621.1| methyltransferase [Cyanothece sp. PCC 7425]
 gi|219865921|gb|ACL46260.1| methyltransferase [Cyanothece sp. PCC 7425]
          Length = 191

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 33/155 (21%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  AL        K +  R LDL  G+GA+  A        + VG++ S +A EI + N 
Sbjct: 26  VREALFNI--WQGKIEDCRWLDLCAGSGAMG-AEALCRGAVRVVGIEKSGRACEIIRQNW 82

Query: 142 VT-NGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                  ++F  L+ D    +       FD I  +PPY               ++P    
Sbjct: 83  QRVAQPEQQFQILRGDILQQLPLLVGQQFDRIYFDPPYASG-----------LYEP---- 127

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                GL   R IAD   + L  +G  ++E    Q
Sbjct: 128 -----GL---RAIADL--QLLAPEGEIAIECNAQQ 152


>gi|284053249|ref|ZP_06383459.1| UbiE/COQ5 methyltransferase [Arthrospira platensis str. Paraca]
          Length = 220

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 28/146 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ A A     +  R    +LD GTGT  + + + K+ P ++ +G+D+S   L+I + N 
Sbjct: 27  VNRAFAEEAIAVLPRSEGMVLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNI 86

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              GVS + +    D      ++G FD+++SN       IV  LG               
Sbjct: 87  KAAGVSSQVELALVDAKKLPYIDGQFDLVISN------SIVHHLG--------------- 125

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D L         V R L   G   +
Sbjct: 126 -DPLPF----LCEVKRVLKPGGGIFL 146


>gi|269140075|ref|YP_003296776.1| hypothetical protein ETAE_2730 [Edwardsiella tarda EIB202]
 gi|267985736|gb|ACY85565.1| hypothetical protein ETAE_2730 [Edwardsiella tarda EIB202]
 gi|304559903|gb|ADM42567.1| Predicted O-methyltransferase [Edwardsiella tarda FL6-60]
          Length = 247

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 62/175 (35%), Gaps = 17/175 (9%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + D   ILD+G+G+G + L + + S   +  GV+I   A      N + +    R     
Sbjct: 46  RGDERHILDIGSGSGVLALMMAQRSA-AQVDGVEIEPGAATQGLENFLASPWPTRLTMHT 104

Query: 155 SDW--FSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
                FS+  G  +D++VSNPPY    +                     D L H   +  
Sbjct: 105 RSLQAFSAECGRRYDLLVSNPPYFAPGVACRTAARATAR--------YTDSLDHA-ALLQ 155

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN--AFKDYGGND--RVLLF 262
             +     DG  ++ +       VVR   +    L+     +D       R LL 
Sbjct: 156 HAAELSCADGRLALVLPVEAAESVVRAGTAHGWHLLRRTWVRDRADKPVRRALLL 210


>gi|189198237|ref|XP_001935456.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187981404|gb|EDU48030.1| siroheme synthase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 487

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 18/144 (12%)

Query: 61  YNVRLTLSSDTFEP----RPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAV- 111
           + + L +  D   P    R         L+DS         +    +R LD+GTG  A+ 
Sbjct: 295 FGLELHVPGDRLCPPIPNRWNYVAWLQGLIDSTSPNYTSNYDPNRQIRGLDIGTGASAIY 354

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GL 164
            L  LK  P +     DI  K+ E A  N   N +  R   LQ+   + +          
Sbjct: 355 TLLCLKSRPNWSMCATDIDKKSFESAARNLALNTLMTRTKLLQTTELNPLIPLAALGVDH 414

Query: 165 FDVIVSNPPYIESVIVDCLGLEVR 188
            D  + NPP+     V  +   ++
Sbjct: 415 LDFTICNPPFF--NDVADMQSSLK 436


>gi|149190145|ref|ZP_01868421.1| 16S RNA G1207 methylase RsmC [Vibrio shilonii AK1]
 gi|148836034|gb|EDL52995.1| 16S RNA G1207 methylase RsmC [Vibrio shilonii AK1]
          Length = 340

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 37/169 (21%)

Query: 62  NVRLTLS--SDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
            + +T++     F   E    ++LL+      +LP ++     ++LD G G G +   + 
Sbjct: 169 GLPITVNSLPGVFSHGEFDSGSQLLL-----NNLPELKG----KVLDFGCGAGVIGAYMG 219

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
            +    +    DI+  A+E +K   + N +  +     SD +S V    D I+SNPP+  
Sbjct: 220 LKYNDIELNMCDINAFAIESSKQTLLANNLEGQVFA--SDVYSDVTPGLDFIISNPPFHA 277

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +       E                     T+      ++N  G   +
Sbjct: 278 GLDTSYSATE---------------------TLLSDAPNYMNSKGQLMI 305


>gi|16329773|ref|NP_440501.1| hypothetical protein slr1039 [Synechocystis sp. PCC 6803]
 gi|1652258|dbj|BAA17181.1| slr1039 [Synechocystis sp. PCC 6803]
          Length = 233

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 28/133 (21%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DT 152
                 +LD GTGT  + + L +  P ++   +D +   L IAK N +  G   +   + 
Sbjct: 40  GPSKATVLDAGTGTARIPILLAQLRPAWQITAIDFARSMLAIAKENVIAAGCETQICLEF 99

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + +       G FD +++N               +    PR         L   R     
Sbjct: 100 VDAKQLPYANGSFDGVIAN--------------SLCHHLPR--------PLDFLR----E 133

Query: 213 VSRHLNKDGLCSV 225
           V R L   G   +
Sbjct: 134 VKRVLKPHGFLLI 146


>gi|319789216|ref|YP_004150849.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1]
 gi|317113718|gb|ADU96208.1| protein of unknown function Met10 [Thermovibrio ammonificans HB-1]
          Length = 399

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 48/136 (35%), Gaps = 23/136 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LD     G   +         + V VD S  AL++A+ NA  NGV E+F  ++ 
Sbjct: 218 KEGDRVLDAFCHLGGFGIHAAVIGKAGEVVAVDSSQLALDLARENAALNGVEEKFTFVKG 277

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D F  ++        FD IV +PP                            G   Y+ +
Sbjct: 278 DAFKVLKEMSLWGEKFDSIVIDPPAFAKSKKVLEQA--------------KKG---YKEL 320

Query: 210 ADGVSRHLNKDGLCSV 225
                + L   G   V
Sbjct: 321 FLRGLKMLKPGGNIVV 336


>gi|156544355|ref|XP_001607348.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 515

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 21/173 (12%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +N+ + +  +   P    R    L ++  L      I+    V  LD+GTG   +   L 
Sbjct: 63  FNLDVDIPPNHLVPALPLRLNYILWIEDLLNHC--GIQDLSTVHGLDIGTGAICIYPILF 120

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEG--LFDVIVS 170
                 K    DI  K++  A  N   N + +  + +    +S    ++E    +  ++ 
Sbjct: 121 SNLYKTKMTCTDIDPKSIISATENIEKNNLQDLIEVILIKKESILKEALEKNEKYSFVMC 180

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-------SHYRTIADGVSRH 216
           NPP+ E+     LG + +   PR +  G  + L            + +    +
Sbjct: 181 NPPFFETD--KGLGKKSKQEPPRNAPTGNANELEVKGGEREFILRLIEESLEY 231


>gi|292669053|ref|ZP_06602479.1| hypothetical protein HMPREF7545_0017 [Selenomonas noxia ATCC 43541]
 gi|292649308|gb|EFF67280.1| hypothetical protein HMPREF7545_0017 [Selenomonas noxia ATCC 43541]
          Length = 257

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 43/216 (19%)

Query: 53  RIL----GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
            IL    G   F  + +      F    E   L+    ++ L ++        LD+G G+
Sbjct: 42  YILAILSGAATFVVIYMYYCRRVFSF--EGGGLMRRIHSYLLDQLPWDGSGTALDIGCGS 99

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKS----NAVTNGVSERFDTLQSDW--FSSVE 162
           G + +A+ K+ P  +  G+D         K     NA   GV++R      D       +
Sbjct: 100 GTLTIAVAKKFPLAQVQGIDYWPAMWNYGKEQCEGNAAAEGVADRCAFQHGDAAQLDFPD 159

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
             FD +VSN  +           EVR    +               + +   R L K G 
Sbjct: 160 NHFDAVVSNFVF----------HEVRTQKDKF-------------MLVEESLRVLKKGGA 196

Query: 223 CSVEIG-------YNQKVDVVRIFESRKLFLVNAFK 251
            ++          Y +  + +   + + +  ++   
Sbjct: 197 FAL-HDTFENRDLYGKMDEFITYLKEKGISDISYLP 231


>gi|254456634|ref|ZP_05070063.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207083636|gb|EDZ61062.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 396

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 26/137 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   + ++  +   ++LD+G G G++ + + K S   +  G+ +S   L   +  A    
Sbjct: 161 IQHIIKKLNIKTNQKVLDIGCGWGSLAIDIAK-SANCEVTGITLSENQLNYCRKKAKELN 219

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  + +    D +  +   FD IVS                V  F+          G   
Sbjct: 220 LENQLNFKLID-YRELNEKFDRIVS----------------VGMFE--------HVGRKF 254

Query: 206 YRTIADGVSRHLNKDGL 222
           Y+     + + LN+DG+
Sbjct: 255 YKKFFKQIDKLLNEDGI 271


>gi|20089604|ref|NP_615679.1| hypothetical protein MA0719 [Methanosarcina acetivorans C2A]
 gi|19914523|gb|AAM04159.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 197

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L    L F+  + +  + V+  DLG GTG + +   K     K VG D   KALE+A+ N
Sbjct: 32  LAAEILHFAYMQGDLDESVQ--DLGCGTGILAIG-AKLLGARKVVGYDTDPKALEVARKN 88

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY---IESVIVDCLGLEVRDFD 191
           A   GV    + + SD    V G     + NPP+   ++      L   +R  +
Sbjct: 89  AERLGVE--VEFVCSDI-KKVSGHVKTTLMNPPFGARVKGRDRPFLSSALRTSE 139


>gi|310657890|ref|YP_003935611.1| hypothetical protein CLOST_0580 [Clostridium sticklandii DSM 519]
 gi|308824668|emb|CBH20706.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 570

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 38/192 (19%)

Query: 97  DVVRILDLGTGTGA---VCLALLKESPFFK-----------GVGVDISCKALEIAKSNAV 142
           +  +ILD   G GA   + L    E  + K            +G+DI   A+E+AK N  
Sbjct: 32  EAAKILDPCIG-GASFDIALFQALEQEYIKSYKLSEFLKTNFIGIDIEASAIELAKENLK 90

Query: 143 TNGV--SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG- 198
             G+  ++  +    D+ +      FD+I+ NPPYI       +  +VRD +      G 
Sbjct: 91  KVGISYADNLNLKCKDYLTDFNEQGFDLIIGNPPYIGEKGNRAVFSKVRDTE-----FGK 145

Query: 199 --GIDGLSHYRTIADGVSRHLNKDGLCSVEIG-----YNQKVDVVRIFESR-------KL 244
                G+ ++    +     LN+DG+ ++         +    +     +R         
Sbjct: 146 KYYEKGMDYFYFFIEKSLEILNEDGILAMITPAYWTRADSASKLREAIRARASFVDVIDF 205

Query: 245 FLVNAFKDYGGN 256
             + AFKD  G+
Sbjct: 206 GELRAFKDAVGH 217


>gi|283769526|ref|ZP_06342422.1| conserved hypothetical protein [Bulleidia extructa W1219]
 gi|283103794|gb|EFC05180.1| conserved hypothetical protein [Bulleidia extructa W1219]
          Length = 209

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 22/162 (13%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L    D +    +TELL           +E  D   +LD+G   GA+ L   KE     G
Sbjct: 8   LAQGKDWYHFNGDTELL--------GRFLEVYDGETVLDIGCNQGAL-LYYAKEKADIIG 58

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV-DCL 183
           +GVD+  + LE AK NA+ N V   F  + S        L DVIV NPPY    I  + L
Sbjct: 59  IGVDVFSEVLESAKENAIYNRV--NFQFVCSRIQEYKAELVDVIVCNPPYFSGDIKNNNL 116

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L+    +  + L          R + + V R L  +G   +
Sbjct: 117 YLDTARREKYLPL----------RDLMEAVHRLLKGNGRFYI 148


>gi|315231489|ref|YP_004071925.1| RNA methylase [Thermococcus barophilus MP]
 gi|315184517|gb|ADT84702.1| RNA methylase [Thermococcus barophilus MP]
          Length = 208

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 2/110 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L +    +   +   I DLG GTG + +         K   V+I   AL+IA+ N 
Sbjct: 32  VAAELLWLAYSLGDVEGKVIADLGAGTGVLSVG-ACLLGAKKVYAVEIDESALKIAEENV 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
               V    + + SD  S  +   D ++ NPP+            ++ F+
Sbjct: 91  KALSVETCVELILSDV-SFFDKQADAVIMNPPFGSQNPKADRPFLLKAFE 139


>gi|78044697|ref|YP_359278.1| ribosomal protein L11 methyltransferase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|123576948|sp|Q3AF06|PRMA_CARHZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|77996812|gb|ABB15711.1| ribosomal protein L11 methyltransferase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 305

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 6/89 (6%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV  AL   +          ++D+GTG+G + +A        K   +DI   A+++A
Sbjct: 154 TTALVLEALPKYVS-----PGKVVVDVGTGSGILAIASALLGAE-KIYALDIDPVAVKVA 207

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           + N   N + ++   +++D         D
Sbjct: 208 RENISINRLEDKITVIENDLLHGFNQTVD 236


>gi|297182703|gb|ADI18859.1| 16S RNA g1207 methylase rsmC [uncultured Pseudomonadales bacterium
           HF0010_05E14]
          Length = 254

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 48/150 (32%), Gaps = 26/150 (17%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
             +  L+D+           +    +LDLG G G + +       F + +  D +  AL 
Sbjct: 96  EGSRFLIDTV--PIYLSHFNQPPETLLDLGCGYGYLSV-CASRFNFKRIIATDNNAGALI 152

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             + N     +   ++ +  D   S+E  FD I SNPP+        L   V +      
Sbjct: 153 ATERNLAR--IKIAYEVIGDDAGESIEENFDSIWSNPPFHSGF---SLSTTVLN------ 201

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                LN +G C  
Sbjct: 202 ------------KFLKSSKNLLNPNGKCLF 219


>gi|20429104|emb|CAD24416.1| hypothetical protein [Paracoccus zeaxanthinifaciens]
          Length = 246

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 74/222 (33%), Gaps = 45/222 (20%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L       R   + ++ +A   + P         +L+LG G G   L L    
Sbjct: 9   FLGGRLQLWQPARGYRSGADAVMLAAACRAAPGDS------VLELGCGAGVASLCLAARV 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYI 175
           P  +  G++       +A  NA   G+    D L  D      GL    FD ++ NPPY 
Sbjct: 63  PGLRCTGLERQADYAALALRNAQECGLP--LDVLTGDLSDPPAGLRGRGFDHVIMNPPYF 120

Query: 176 ESVIVDCLGLEVRDFDPRISLDGG-------IDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                              + D G          L  +    D   R LN  G  +V   
Sbjct: 121 LGGTP--------------APDAGRATARTEETPLDDW---LDAGLRRLNPKGWLTVIQR 163

Query: 229 YNQKVDVVRIFESRKLFL----VNAFKDYGGND--RVLLFCR 264
            ++   ++   + R   +    + A +   G +  RV++  R
Sbjct: 164 ADRLDRIIAALQGRAGAIAILPIAARQ---GREAGRVIVAAR 202


>gi|242051741|ref|XP_002455016.1| hypothetical protein SORBIDRAFT_03g003010 [Sorghum bicolor]
 gi|241926991|gb|EES00136.1| hypothetical protein SORBIDRAFT_03g003010 [Sorghum bicolor]
          Length = 558

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L L + + 
Sbjct: 367 RGLTFQISANSFFQTNTKQADVLYKLIEDSAGLKGDGSEIVLDLFCGTGTIGLTLARRAK 426

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A+ NA  NG+ +    +Q D       F       D+I+S+P
Sbjct: 427 --HVYGYEVVPEAIADARKNAKLNGI-DNATFVQGDLNKINESFGKEFPKPDIIISDP 481


>gi|332796503|ref|YP_004458003.1| methylase [Acidianus hospitalis W1]
 gi|332694238|gb|AEE93705.1| methylase [Acidianus hospitalis W1]
          Length = 197

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 13/126 (10%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F  ++L ++ + +EP  +TELL        L  ++ +   +++++G+G+G + +   K 
Sbjct: 8   EFNGIKLCINDEVYEPAEDTELL--------LSIVKIKKGEKVVEIGSGSGILSIISAKM 59

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
               K   +DI+  A      ++  N +    D +  D  + +    FDV + NPPY+  
Sbjct: 60  --GGKVYSIDINPFASLATLCSSKLNNLY--IDVINCDMLTCLRNITFDVGIFNPPYLPF 115

Query: 178 VIVDCL 183
              D  
Sbjct: 116 EEYDDW 121


>gi|300119129|ref|ZP_07056830.1| methyltransferase [Bacillus cereus SJ1]
 gi|298723451|gb|EFI64192.1| methyltransferase [Bacillus cereus SJ1]
          Length = 246

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 18/186 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V L LL     
Sbjct: 16  DMKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPL-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRK 243
           +    K
Sbjct: 182 LMRKYK 187


>gi|289621801|emb|CBI51712.1| unnamed protein product [Sordaria macrospora]
          Length = 424

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 68/242 (28%), Gaps = 97/242 (40%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR-----------PETELLVDS 84
             +     R  K   +  +LG + F ++ +   S    PR           P +  L   
Sbjct: 55  ARVWKLCDRRGKGLPLAYVLGNQPFGDLEIKCQSGVLIPRVLYHPPLQHPSPLSYFL--- 111

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-----------------SPFFKGVGV 127
           A+    P        R L                                       VGV
Sbjct: 112 AIKPRPPTPTTPKHNRPL--------------HRNRLRPAPPLLPTLPHSPFQSLNVVGV 157

Query: 128 DISCKALEIAKSNAVTNGVSERF-------------------DTLQSDWFSSVE------ 162
           DIS KA+ +++ N   N    RF                   + L++D FS         
Sbjct: 158 DISQKAINLSRQNLQHNLRLHRFPPPSNLHKTKSDSGPQRSINFLKADIFSPSALDPILS 217

Query: 163 --------------------------GLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRIS 195
                                       +D++ SNPPYI  S  +      VR+++P+++
Sbjct: 218 IPLLSSSSSSSSSSSTSSTYDTGYTGDEWDILTSNPPYISPSGFLVSTSRSVRNWEPKLA 277

Query: 196 LD 197
           L 
Sbjct: 278 LV 279


>gi|167630501|ref|YP_001681000.1| ribosomal protein l11 methyltransferase [Heliobacterium
           modesticaldum Ice1]
 gi|226710088|sp|B0TAD9|PRMA_HELMI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|167593241|gb|ABZ84989.1| ribosomal protein l11 methyltransferase [Heliobacterium
           modesticaldum Ice1]
          Length = 316

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 33/188 (17%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRIL-----------GWRDFY-- 61
           G+   +  +  D+ L++R          R   +    H               W+ F+  
Sbjct: 60  GMIRVKTYLAIDNTLEERLAALQEELSARERSEKWPAHAWTMTDLHEDDWAHAWKAFFKP 119

Query: 62  ---NVRLTLSSDT--FEPRPETELL-VDSALAFSLPRIEK------------RDVVRILD 103
                R+ +      + P+ +  ++ +D  +AF                        +LD
Sbjct: 120 EKVGRRVVIRPTWEEYVPKEDDLVISIDPGMAFGTGTHPTTVMCIRALEDYVHAEAHVLD 179

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTG+G + +A        + + VD    A+  A+ N + N V E  +  ++D  S +  
Sbjct: 180 VGTGSGVLSIAAALLGAK-RVLAVDNDPVAVATAQENVILNQVDEIVEVRRNDLLSGLSE 238

Query: 164 LFDVIVSN 171
             D++V+N
Sbjct: 239 QADILVAN 246


>gi|226311619|ref|YP_002771513.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC
           100599]
 gi|254782831|sp|C0ZB50|PRMA_BREBN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226094567|dbj|BAH43009.1| ribosomal protein L11 methyltransferase [Brevibacillus brevis NBRC
           100599]
          Length = 313

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 83/269 (30%), Gaps = 70/269 (26%)

Query: 19  SHQVIVDPDSVLD--DRQRFFLTNAIVR------------SLKHESIHRILGWRDFYN-- 62
              + VD   +LD  +  +  L   I               +  +       W+ +Y   
Sbjct: 65  KAYLPVDSSELLDVVEELKEQLAQLIEYGLDIGKASIAVNDVHEDEWAH--AWKKYYKPV 122

Query: 63  -----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV--------------RILD 103
                + +    + + P+   E++++     +         +              ++ D
Sbjct: 123 HVSDRMTIKPVWEEYVPKHPDEIIIEMDPGMAFGTGTHPTTILCLRALEKYMAKGDQVYD 182

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +GTGT  + +A +K       + +D+   A+  A++N   NGV E  +  Q++    +E 
Sbjct: 183 VGTGTAILSIAAIKLGAK-DVLAMDLDEVAVRSAQANTELNGVHEHINVRQNNLLDGIEE 241

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
             +V+V+N                      ++               D V R L   G  
Sbjct: 242 QVEVVVAN---------------------ILA--------EVIVRFTDDVFRVLKPGGTF 272

Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVNAF 250
                I   +  DV     +  L +V   
Sbjct: 273 ISSGIIAAREA-DVKAALVASGLEIVETI 300


>gi|254508212|ref|ZP_05120336.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 16]
 gi|219548829|gb|EED25830.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 16]
          Length = 340

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 14/129 (10%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +N+ +      F   +    ++LL+D     +LP +      ++LD G G G +   +  
Sbjct: 170 HNLTIKSLPGVFSHGQFDVGSQLLLD-----TLPAL----TGKVLDFGCGAGVIGSVMAT 220

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
            +P  +    DIS  A+E +K+    N +S +     SD +S     +  IVSNPP+   
Sbjct: 221 LNPEIELEMCDISALAVESSKATLAANQLSGKVFA--SDVYSDTSDDYQFIVSNPPFHAG 278

Query: 178 VIVDCLGLE 186
           +       E
Sbjct: 279 LDTSYSATE 287


>gi|260833806|ref|XP_002611903.1| hypothetical protein BRAFLDRAFT_106799 [Branchiostoma floridae]
 gi|229297275|gb|EEN67912.1| hypothetical protein BRAFLDRAFT_106799 [Branchiostoma floridae]
          Length = 650

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 18/150 (12%)

Query: 37  FLTNAIVRSLKHESIHR--ILGWR----DFYNVRLTLSSDTFEPRPETELLVDSAL-AFS 89
           F      R    E      +LG          +   +S D F    +   L    L +  
Sbjct: 426 FFQAHKQRRPGDEEASYQLLLGKEVIQEKLLGMTFRISPDAFF---QVNTLAAEVLYSKV 482

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
               +      +LD+  GTG + L L K     K +GV++  +A+E AK NA  NG+   
Sbjct: 483 ADWCDFTKDSTVLDVCCGTGTIGLTLAKHVK--KVIGVELCQQAVEDAKVNANINGIDNA 540

Query: 149 -----RFDTLQSDWFSSVEGLFDVIVSNPP 173
                + + +  D    + G   V V +PP
Sbjct: 541 EFLCGKAEDILPDLVRRLYGTDLVAVVDPP 570


>gi|218283926|ref|ZP_03489794.1| hypothetical protein EUBIFOR_02390 [Eubacterium biforme DSM 3989]
 gi|218215505|gb|EEC89043.1| hypothetical protein EUBIFOR_02390 [Eubacterium biforme DSM 3989]
          Length = 194

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 41/200 (20%)

Query: 59  DFYNVRLTLSSDTFEPRPE-----TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            F +    L+S+      +     T +L+++ L        + + V  LDLG G G + L
Sbjct: 20  HFRDFTYKLNSNAGVFSKDKLDEGTRILLETVLD------NQSEPVSCLDLGCGIGPIAL 73

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            L++   + +   +D++ +A ++A SN        +    QS      EG +  I+ NPP
Sbjct: 74  ILMEYWKYTEMTMIDVNQRACQLADSNMKKYRRKAKI-ICQSGI---NEGQYACILLNPP 129

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G +   ++ D    HL  DG   + +      
Sbjct: 130 I-------------------------RTGKAMIYSLFDQCMEHLATDGHFWIVMRKQHGA 164

Query: 234 D-VVRIFESRKLFLVNAFKD 252
              +   + +   +    +D
Sbjct: 165 QSAINYLQEKGYEVEKVARD 184


>gi|89073152|ref|ZP_01159691.1| Hypothetical methyltransferase [Photobacterium sp. SKA34]
 gi|89051105|gb|EAR56562.1| Hypothetical methyltransferase [Photobacterium sp. SKA34]
          Length = 374

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 27/156 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDT 152
           + +    I+DLG G G + +   + +P    V VD S  A    + NA  N    ++   
Sbjct: 227 QDKKYKDIIDLGCGNGVIGIKTAQLNPQASVVCVDESFMATASCRENADLNLENPKQLQV 286

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           + ++   +      D+++ NPP+ +          V D                   +  
Sbjct: 287 VTANCLDNFPLDSADLVLCNPPFHQ-------QNTVTDH--------------IAWQMFC 325

Query: 212 GVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
              R L + G   V IG  Q      + R+F + KL
Sbjct: 326 DAQRVLRQGGELIV-IGNRQLGYHEKLKRVFGNVKL 360


>gi|84496250|ref|ZP_00995104.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649]
 gi|84383018|gb|EAP98899.1| hypothetical protein JNB_01985 [Janibacter sp. HTCC2649]
          Length = 370

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 55/146 (37%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +D      L  I + R   R +DL  G+G V  AL    P    +  D S  A+   ++ 
Sbjct: 209 IDIGTRLLLDHIPEMRQAERAIDLACGSGVVAAALALARPELHVLATDQSAAAIASTRAT 268

Query: 141 AVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           A  NGVS+R + +++D   +V      +IV NPP+     V            R++    
Sbjct: 269 AAANGVSDRVEVVRADGLETVATASAQLIVLNPPFHVGAAVHT----------RLA---- 314

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +    +R L   G   V
Sbjct: 315 -------ERLFAEAARALEPGGELWV 333


>gi|332074132|gb|EGI84610.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA41301]
          Length = 316

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|269961960|ref|ZP_06176315.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
           1DA3]
 gi|269833283|gb|EEZ87387.1| Ribosomal RNA small subunit methyltransferase C [Vibrio harveyi
           1DA3]
          Length = 341

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP++      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPKLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + + +P       DI+  A+  +++    NG+S R     SD +S     +  IVSNPP+
Sbjct: 218 MAQANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTAKDYRFIVSNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +++  +G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGQAPKYMTANGEMVI 305


>gi|259503110|ref|ZP_05746012.1| methyltransferase [Lactobacillus antri DSM 16041]
 gi|259168976|gb|EEW53471.1| methyltransferase [Lactobacillus antri DSM 16041]
          Length = 253

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 25/191 (13%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VRL  S   F    +  LL D        R  +R  +RI+DL  G  AV L L  +   
Sbjct: 21  DVRLIQSPSCFAFSLDAVLLADFV------RPNRRRQLRIVDLCAGNAAVGLFLHNKLGG 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSV-EGLFDVIVSNPPYIES 177
            +   V++  +  ++A+ +   NG+++R+  L    +D FS++ +   D+++ NPPY   
Sbjct: 75  -QFTEVELQTRIADMARRSIALNGLTDRYRVLNLDIADVFSAIPKDSADIVLCNPPYFPV 133

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   + + +L            +A  +S  L  +G   +    ++  
Sbjct: 134 TEKSQKNPNQYLAIARHELKTNLA----------MVAQQMSGLLKMNGHGYLVHRPDRLT 183

Query: 234 DVVRIFESRKL 244
           +++ + + ++L
Sbjct: 184 EILTVLQQQRL 194


>gi|254785988|ref|YP_003073417.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901]
 gi|237687034|gb|ACR14298.1| RNA methyltransferase, RsmC family [Teredinibacter turnerae T7901]
          Length = 342

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 27/126 (21%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT--NGVSERFDTLQSDWFS 159
           LDLG G G + + LLK     + +  D +  A+ +A  NA    NG ++ F  + +D  S
Sbjct: 208 LDLGCGYGYLGVGLLKAGWQ-QIIATDNNAAAV-LAC-NATLTENG-AQNFSVVAADCGS 263

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           S+E   D++V NPP+ +   V+                      S         +R L  
Sbjct: 264 SIERKADLVVCNPPFHQGFGVES---------------------SLTNRFVANAARLLKP 302

Query: 220 DGLCSV 225
            G    
Sbjct: 303 GGTALF 308


>gi|146281500|ref|YP_001171653.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri A1501]
 gi|226712968|sp|A4VIL0|RSMC_PSEU5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|145569705|gb|ABP78811.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri A1501]
          Length = 332

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 23/139 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++     R+LD G G G +   L +  P  + V +D+   A+E ++    
Sbjct: 177 DLGSALLLEHLDNLPGGRLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + +  D   +       I+SNPP+ + V       E                
Sbjct: 237 ANGLEA--EVIAGDGIDAAPRQLAAIISNPPFHQGVHTSYHASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDG 221
                T+ +  + HL   G
Sbjct: 279 -----TLIERAAEHLQASG 292


>gi|116333372|ref|YP_794899.1| ribosomal protein L11 methylase [Lactobacillus brevis ATCC 367]
 gi|122269941|sp|Q03SF4|PRMA_LACBA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116098719|gb|ABJ63868.1| LSU ribosomal protein L11P methyltransferase [Lactobacillus brevis
           ATCC 367]
          Length = 316

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 58/234 (24%)

Query: 55  LGWRDFYN-----VRLTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y+       LT++     + P    E ++               + L+ +   +
Sbjct: 112 TAWQKYYHPVRVTRYLTVTPSWEKYTPVQPNEHVIRLDPGMAFGTGTHPTTRLSMTALEM 171

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    + D+GTG+G + +A  K     +    D+   A+  AK+N   N ++      
Sbjct: 172 VVRGGETMYDVGTGSGVLSIA-AKYLGVNQITAFDLDEVAVRSAKTNLDLNPIATDVVAK 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D    +    D++V+N                      ++             +    
Sbjct: 231 PNDLLKGIHHPVDLVVAN---------------------ILA--------EIILPLVPQA 261

Query: 214 SRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF--KDYGGNDRVLLFCR 264
             +L   G      I  ++  +VV   E +   + N    KD+    R ++  R
Sbjct: 262 WENLTPGGYFLTSGIIADKLAEVVAAQEKQGFVIDNILQMKDW----RGVIAHR 311


>gi|295105451|emb|CBL02995.1| SAM-dependent methyltransferase [Faecalibacterium prausnitzii
           SL3/3]
          Length = 409

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 25/130 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L   K     +    DIS +A+ +AK NA  NG+    D L  D F+ 
Sbjct: 239 VLDCFTHTGSFALNAAK-GGAARVTAADISAEAIAMAKRNAERNGL-NNMDFLCEDTFAL 296

Query: 161 VE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         +D I+ +PP                           + +  Y+ I     
Sbjct: 297 LPRLEKEGHPYDFIILDPPAFTKARRTV-----------------ENAMRGYKEINYRAM 339

Query: 215 RHLNKDGLCS 224
           + L + G  +
Sbjct: 340 KLLPRGGYLA 349


>gi|229194425|ref|ZP_04321229.1| hypothetical protein bcere0001_220 [Bacillus cereus m1293]
 gi|228589015|gb|EEK47029.1| hypothetical protein bcere0001_220 [Bacillus cereus m1293]
          Length = 246

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 20/202 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A               +LDL TG   V   LL     
Sbjct: 16  DLKIIQSPSVFNFSLDAVLLADFAWVPI-------QKGNLLDLCTGNAVVPF-LLSTRTK 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
               GV+I  +  ++   +   N + ER   +  D     E      +DV+  NPPY ++
Sbjct: 68  GNITGVEIQERLYDMGIRSVQYNKLEERIHLIHGDLKDMPEKLGRHQYDVVTCNPPYFQT 127

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  +++      +     +    S+ + + G  +      + +D+V 
Sbjct: 128 PATSE-----KNMNEHLAIARHEI-MCTLEDVVSASSQLVKQGGKVAFVHRPGRLLDIVT 181

Query: 238 IFESRKLFLVNAFKDY--GGND 257
           +    K+        Y   G +
Sbjct: 182 LMRKYKIEPKRVRFVYPKAGKE 203


>gi|167748614|ref|ZP_02420741.1| hypothetical protein ANACAC_03387 [Anaerostipes caccae DSM 14662]
 gi|167651928|gb|EDR96057.1| hypothetical protein ANACAC_03387 [Anaerostipes caccae DSM 14662]
          Length = 543

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           I G   FY     ++  +S  +F    +T  L  +     +   + +     I DL +GT
Sbjct: 262 IYGEDFFYEEILGLKFKISPFSFF---QTNSLGAEVLYETAREYVGETKDKVIFDLYSGT 318

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E A+ NA  NG+ +  + +  D       +E  
Sbjct: 319 GTIAQMLA---PVAKKVVGVEIVGEAVEAARENAGLNGL-DNCEFIAGDVLKVIDELEDK 374

Query: 165 FDVIVSNPP 173
            D IV +PP
Sbjct: 375 PDFIVLDPP 383


>gi|4028155|gb|AAC96119.1| YDR140w homolog [Takifugu rubripes]
          Length = 186

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 70/200 (35%), Gaps = 41/200 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            D +EP  +T LL+D AL     R+ +                                D
Sbjct: 19  RDVYEPAEDTFLLMD-ALEKDAERLRQS--------CC--------------------TD 49

Query: 129 ISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI--ESVIVDCLG 184
           ++  A +     + +N VS +    +L     S + G  DV+V NPPY+   S  V   G
Sbjct: 50  VNPAAAQCTAKTSSSNKVSLQPVITSLVDSLLSRLSGKVDVLVFNPPYVVTPSEEVGSRG 109

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRK 243
           +E        +  GG  G          V++ L+  G   +  I  N   +++     + 
Sbjct: 110 IEA-------AWAGGSRGREVTDRFLPVVAQLLSTKGSFYLITIAENDPEEIITSLCQQG 162

Query: 244 LFLVNAFKDYGGNDRVLLFC 263
           L   +      GN+R+ +  
Sbjct: 163 LQGESFLTRRAGNERLSVLR 182


>gi|320527691|ref|ZP_08028863.1| methyltransferase domain protein [Solobacterium moorei F0204]
 gi|320131934|gb|EFW24492.1| methyltransferase domain protein [Solobacterium moorei F0204]
          Length = 224

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  +   R L++G  TGA+ L      P  + VGVD+  +  E+ + N     V  +   
Sbjct: 33  LRIKHQHRFLEIGCNTGAILLYASLRKPK-ELVGVDLFPEVFELTRENLERYQVDAQLHA 91

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE----VRDFDPRISLDGGIDGLSHYRT 208
            +   +   +  FDVI  NPPY  +   + + +         +  + L            
Sbjct: 92  CRIQDYQ--DKPFDVIACNPPYFSTSNQNLMNVNQYKRAGRHEENLPLS----------E 139

Query: 209 IADGVSRHLNKDGLCSVEI 227
           +   V R L  +G   +  
Sbjct: 140 LFTAVKRLLKSNGSFYLVH 158


>gi|294948443|ref|XP_002785753.1| n6-dna-methyltransferase, putative [Perkinsus marinus ATCC 50983]
 gi|239899801|gb|EER17549.1| n6-dna-methyltransferase, putative [Perkinsus marinus ATCC 50983]
          Length = 1025

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 17/157 (10%)

Query: 72  FEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF----FK 123
           + P  +T L    L +     S           IL++G G+G +   L++          
Sbjct: 832 YPPSDDTYLFLDVLHEEVEKMS-DAGSGPGRACILEVGPGSGVLSAYLVRAMESVGVTAH 890

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIV 180
            V +D++ +A E     A   GV  +   +  D+  S   +    D+I+ NPPY+ S   
Sbjct: 891 SVAIDVNRRACEATLRTAKVVGVEAKVHVVLGDFNQSPRWLRYRPDIIICNPPYVPSP-- 948

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                E R      S  GG+ G      +    +R L
Sbjct: 949 ---PEECRSKGIEASWAGGVKGREVIDRMVPVFARLL 982


>gi|90413380|ref|ZP_01221373.1| ribosomal protein L11 methyltransferase [Photobacterium profundum
           3TCK]
 gi|90325622|gb|EAS42091.1| ribosomal protein L11 methyltransferase [Photobacterium profundum
           3TCK]
          Length = 294

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 80/210 (38%), Gaps = 52/210 (24%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +L+D  LAF           L  ++ +D+    I+D G 
Sbjct: 109 FGRRLWICPSWREAPEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGQTIIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     K +G+DI  +A++ ++ NA  NGVS++ +          +   D
Sbjct: 169 GSGILAIAALKLGAK-KVIGIDIDPQAIQASRDNAERNGVSDKLELFLPK-DQPTDVQAD 226

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-- 224
           V+V+N           L   +R+  P              +++           G  +  
Sbjct: 227 VVVAN----------ILAGPLRELSP------------VIKSLV-------KPGGKLAIS 257

Query: 225 --VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             +EI   Q  DV   +           +D
Sbjct: 258 GVLEI---QAEDVSTYYSDELALDPVVARD 284


>gi|46198473|ref|YP_004140.1| ribosomal RNA small subunit methyltransferase C [Thermus
           thermophilus HB27]
 gi|46196095|gb|AAS80513.1| ribosomal RNA small subunit methyltransferase C [Thermus
           thermophilus HB27]
          Length = 375

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 32/177 (18%)

Query: 52  HRILG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            RILG    F+++    S+   +P     LL+  AL   L   E     ++LDLG G GA
Sbjct: 191 ARILGAEYTFHHLPGVFSAGKVDPAS---LLLLEALQERL-GPEGVRGRQVLDLGAGYGA 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + L L +     + VGV+    ++   +     N +  +   L SD   ++  E  FD+I
Sbjct: 247 LTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQ--ALHSDVDEALTEEARFDII 302

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+NPP+                       GG   L   +   D  +  L   G+  +
Sbjct: 303 VTNPPFH---------------------VGGAVILDVAQAFVDVAAARLRPGGVFFL 338


>gi|21227980|ref|NP_633902.1| methyltransferase [Methanosarcina mazei Go1]
 gi|20906406|gb|AAM31574.1| methyltransferase [Methanosarcina mazei Go1]
          Length = 197

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL    L F+  + +  D V   DLG GTG + +   K     K VG D   KALE+A+ 
Sbjct: 31  LLAAEVLHFAYMQGDLDDSVH--DLGCGTGILAIG-AKVLGARKVVGYDTDPKALELARK 87

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY---IESVIVDCLGLEVRDFD 191
           NA   GV    + + SD  S V       + NPP+   ++      L   +R  +
Sbjct: 88  NAEKIGVD--VEFICSDI-SEVSERVKTTIMNPPFGARVKGRDRPFLSSALRTSE 139


>gi|262201923|ref|YP_003273131.1| methyltransferase small [Gordonia bronchialis DSM 43247]
 gi|262085270|gb|ACY21238.1| methyltransferase small [Gordonia bronchialis DSM 43247]
          Length = 514

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 21/157 (13%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +  V R LDLGTG G   L L  +    + V  D + +AL +A + A  NG+S  +D   
Sbjct: 170 REPVGRALDLGTGCGIQALHL--DGHCAEIVATDTNDRALRLAAATARINGMS--WDLRA 225

Query: 155 SDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              F  VEG  FD+IVSNPP++            RD+   I  D G+ G +   ++  G+
Sbjct: 226 GSLFEPVEGERFDLIVSNPPFVVGAGD-------RDY---IYRDSGMAGDALCESLIRGI 275

Query: 214 SRHLNKDGLCSVEIGY------NQKVDVVRIFESRKL 244
             HLN  G   +   +      + +  V    +   L
Sbjct: 276 PDHLNPGGTAQLLANWVIGEGVDWRDRVRGWLDGTGL 312


>gi|332364547|gb|EGJ42318.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK355]
          Length = 317

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVEIEADVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 291


>gi|90579848|ref|ZP_01235656.1| Hypothetical methyltransferase [Vibrio angustum S14]
 gi|90438733|gb|EAS63916.1| Hypothetical methyltransferase [Vibrio angustum S14]
          Length = 374

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +T  ++ F    ++  +    L   +P+ +K     I+DLG G G + +   + +P
Sbjct: 198 HKLTITNHANVF--SSDSLDIGGRLLLDFIPQDQKYKD--IIDLGCGNGVIGIKAARLNP 253

Query: 121 FFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
               V VD S  A    + NA  N    ++   + ++          D+++ NPP+ +  
Sbjct: 254 QANIVCVDESFMATASCRENADLNLENPQQLQVVTTNCLDDFPLDSADLVLCNPPFHQ-- 311

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDV 235
                   V D                   +     R L + G   V IG  Q      +
Sbjct: 312 -----QNTVTDH--------------IAWQMFCDAQRVLRQGGDLIV-IGNRQLGYHEKL 351

Query: 236 VRIFESRKL 244
            R+F + KL
Sbjct: 352 KRVFGNVKL 360


>gi|15893598|ref|NP_346947.1| SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
           824]
 gi|15023149|gb|AAK78287.1|AE007545_4 SAM-dependent methyltransferase [Clostridium acetobutylicum ATCC
           824]
 gi|325507718|gb|ADZ19354.1| SAM-dependent methyltransferase [Clostridium acetobutylicum EA
           2018]
          Length = 244

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +  +++      ++DL +GTG +   +  +       G++I    +++A    
Sbjct: 31  VDAVLLANYAKVKSNQT--VIDLCSGTGIIPFIIQGKKSPRHITGIEIQEDMVQMANRTV 88

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY--IESVIVDCLGLE-VRDFDPRI 194
           + N   E+   +  D  +  E       DV+  NPPY    S IV+      +   +   
Sbjct: 89  LYNKFQEKIKFINEDIKNLAELKKLERVDVVTVNPPYKLRNSGIVNEFDKNAIARHEICC 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
           +L            +       L  +G   +     +  D++ +    K
Sbjct: 149 TL----------EDVIKAARTLLKDNGRLFMVHRPERLADILCLMREYK 187


>gi|21219557|ref|NP_625336.1| hypothetical protein SCO1041 [Streptomyces coelicolor A3(2)]
 gi|8894830|emb|CAB96026.1| conserved hypothetical protein SCG20A.21 [Streptomyces coelicolor
           A3(2)]
          Length = 407

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 266 RVVDLGCGNGVVGTAVSLADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 325

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V +G  D++++NPP+                    +  G     +    +  G  R L 
Sbjct: 326 GVPDGSVDLVLNNPPFHS----------------HQATTG-----ATAWRMFTGARRVLR 364

Query: 219 KDGLCSVEIGYNQ---KVDVVRIFESRKL 244
             G   V +G       V + R+F + +L
Sbjct: 365 PGGELWV-VGNRHLGYHVRLRRLFGNSEL 392


>gi|302391393|ref|YP_003827213.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum
           DSM 5501]
 gi|302203470|gb|ADL12148.1| ribosomal protein L11 methyltransferase [Acetohalobium arabaticum
           DSM 5501]
          Length = 290

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 80/207 (38%), Gaps = 47/207 (22%)

Query: 63  VRLTLSSDTFEPRPETELL-VDSALA----------FSLPRIEKRDV--VRILDLGTGTG 109
           + +  + + ++P+PE +++ +D  +A            L  IE+       +LD+GTGTG
Sbjct: 106 LVIKPTWEDYQPKPEEKVIEIDPGMAFGTGSHVTTTMCLEAIEEYSSQYSDLLDIGTGTG 165

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
            + +             +DI   A+ IAK N   NG+S+     Q +    V+  + ++V
Sbjct: 166 ILSIG-AYLLGIEDITAIDIDETAVRIAKENLKLNGISQGVKVEQGNLAEEVDNSYGLVV 224

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           +N   +  +I+D +                       R + D        +G+  +  G 
Sbjct: 225 ANL--LPHIILDLIPN--------------------LRQLIDQ-------EGIFIL-SGI 254

Query: 230 NQ--KVDVVRIFESRKLFLVNAFKDYG 254
            Q  K  +    +   L ++   KD G
Sbjct: 255 TQEKKKRIKEELKEFSLKVIEV-KDSG 280


>gi|258542092|ref|YP_003187525.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633170|dbj|BAH99145.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636227|dbj|BAI02196.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639282|dbj|BAI05244.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642336|dbj|BAI08291.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645391|dbj|BAI11339.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648446|dbj|BAI14387.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651499|dbj|BAI17433.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654490|dbj|BAI20417.1| cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 403

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 28/168 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLK 117
           F +     S   F    ET      A    +    +  R  + +LD+G G G + L L K
Sbjct: 136 FLDKDWQYSCAYFRHGTETLDEAQEAKKHHIAAKLLLDRPGLEVLDIGCGWGGMALTLAK 195

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +       G+ +S + L  A+  A   G+  R      D + ++   FD IVS       
Sbjct: 196 DY-GAIVTGITLSQEQLAFARQRAKDEGLEGRVRFELLD-YRNLHRRFDRIVS------- 246

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    V  F+          G+ HYR   D +   L +DG+  V
Sbjct: 247 ---------VGMFE--------HVGVGHYRQFFDVIKNALVEDGVALV 277


>gi|304316646|ref|YP_003851791.1| ribosomal protein L11 methyltransferase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778148|gb|ADL68707.1| ribosomal protein L11 methyltransferase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 308

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 22/135 (16%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV---DSALAFSLPRIEK------------R 96
           W+ +Y       R+ +     + +PE   +V   D  +AF     E             +
Sbjct: 113 WKKYYKPFKIGKRVVIKPSWEDYKPEENEIVVELDPGMAFGTGSHETTKMCIEFLEDYVK 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G GTG + + +  +    K   VD+   A+++A  N   N + +  + L+SD
Sbjct: 173 PNNVVFDVGCGTGILSI-VSSKLGAKKVYAVDLDDVAIKVASLNVKLNNL-DNIEVLKSD 230

Query: 157 WFSSVEGLFDVIVSN 171
               + G  D+IV+N
Sbjct: 231 LLHELTGKADLIVAN 245


>gi|170056918|ref|XP_001864248.1| 23S rRNA methyltransferase [Culex quinquefasciatus]
 gi|167876535|gb|EDS39918.1| 23S rRNA methyltransferase [Culex quinquefasciatus]
          Length = 619

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 12/106 (11%)

Query: 49  ESIHRILGWR----DFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRIL 102
                + G      + + ++  +S   F     P  E+L  +A+  +           IL
Sbjct: 367 HPTTHLWGETHIIEEIHGLKFRVSPQAFFQINTPSAEILYQTAIDLA----GTTKQTSIL 422

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           D+  GTG + L   K     + +GV+I  +A+  A  NA  NG+  
Sbjct: 423 DICCGTGTIGLCFAKHCK--QVLGVEIVAEAIADATHNAKENGIEN 466


>gi|170039429|ref|XP_001847537.1| RNA m5u methyltransferase [Culex quinquefasciatus]
 gi|167863014|gb|EDS26397.1| RNA m5u methyltransferase [Culex quinquefasciatus]
          Length = 622

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 12/106 (11%)

Query: 49  ESIHRILGWR----DFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRIL 102
                + G      + + ++  +S   F     P  E+L  +A+  +           IL
Sbjct: 370 HPTTHLWGETHIIEEIHGLKFRVSPQAFFQINTPSAEILYQTAIDLA----GTTKQTSIL 425

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           D+  GTG + L   K     + +GV+I  +A+  A  NA  NG+  
Sbjct: 426 DICCGTGTIGLCFAKHCK--QVLGVEIVAEAIADATHNAKENGIEN 469


>gi|4239958|dbj|BAA74757.1| Orf375 [Thermus thermophilus]
          Length = 375

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 32/177 (18%)

Query: 52  HRILG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            RILG    F+++    S+   +P     LL+  AL   L   E     ++LDLG G GA
Sbjct: 191 ARILGAEYTFHHLPGVFSAGKVDPAS---LLLLEALQERL-GPEGVRGRQVLDLGAGYGA 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + L L +     + VGV+    ++   +     N +  +   L SD   ++  E  FD+I
Sbjct: 247 LTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQ--ALHSDVDEALTEEARFDII 302

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+NPP+                       GG   L   +   D  +  L   G+  +
Sbjct: 303 VTNPPFH---------------------VGGAVILDVAQAFVDVAAARLRPGGVFFL 338


>gi|330686115|gb|EGG97736.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           VCU121]
          Length = 312

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 13/118 (11%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + + 
Sbjct: 172 EPQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVNVAKENFEKNHCLNAIEAVP 229

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +     +  FD++++N   I + I+D +  +  +           DG      I + 
Sbjct: 230 GNLLKDEKEHFDIVIAN---ILAHIIDEMIEDAYN-------TVNEDGYFITSGIIEE 277


>gi|331270640|ref|YP_004397132.1| methyltransferase small [Clostridium botulinum BKT015925]
 gi|329127190|gb|AEB77135.1| methyltransferase small [Clostridium botulinum BKT015925]
          Length = 242

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 31/187 (16%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              + +      +D+ L  +   ++  +  R++DL +GTG V   +  ++      G++I
Sbjct: 16  HVIQKKDGFRFGIDAVLLANFANVKNGN--RVVDLCSGTGIVPFIIAGKTKASSITGIEI 73

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNPPYI--------E 176
               +E+A  +   N + E+ + +  D  ++++        DV+  NPPY          
Sbjct: 74  QEDMVEMANRSIKFNELQEKIEFICEDL-TNIDVMKKVPKADVVTVNPPYKLYNSGIVNP 132

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
           S  +     EV               L     I       L  +    +    ++  D++
Sbjct: 133 SDKMAIARHEVCCN------------LEDV--IIA-CRTLLKDNKRMYMVHRPDRLADII 177

Query: 237 RIFESRK 243
            +    K
Sbjct: 178 TLMRKNK 184


>gi|149910033|ref|ZP_01898681.1| ribosomal protein L11 methyltransferase [Moritella sp. PE36]
 gi|149806901|gb|EDM66862.1| ribosomal protein L11 methyltransferase [Moritella sp. PE36]
          Length = 293

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 32/160 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL       +      ++D G G+G + +A LK     + +GVDI  +A+  ++ NA  
Sbjct: 145 TALCLEWLDGQDLTGKTVVDFGCGSGILAIAALKLGAK-RVIGVDIDPQAILASRDNAER 203

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NGV+++ +                      Y+ +   D +  ++   +   +        
Sbjct: 204 NGVADQIEL---------------------YLPADQPDGIKADIVVANILAA-------- 234

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESR 242
              R ++  +   L   G  ++  I  +Q  ++  I+   
Sbjct: 235 -PLRELSGLIISFLKPGGKLALSGILDHQAAELNEIYRQH 273


>gi|269124815|ref|YP_003298185.1| type 11 methyltransferase [Thermomonospora curvata DSM 43183]
 gi|268309773|gb|ACY96147.1| Methyltransferase type 11 [Thermomonospora curvata DSM 43183]
          Length = 356

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 2/110 (1%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F + +  ++   F     T  L  +AL     RI   D  RI D+G G G   LAL +  
Sbjct: 140 FRHGQGRINRPAFTHELPTSWL--AALPDVAERINGADRPRIADVGCGQGWSSLALARAF 197

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           P     G+D    ++E A+ +A   G+  R      D     +G +D+IV
Sbjct: 198 PNAWVDGIDADAASIEDARRHAAEAGLDGRLRFRCEDAAELADGPYDLIV 247


>gi|227524418|ref|ZP_03954467.1| ribosomal protein L11 methyltransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227088423|gb|EEI23735.1| ribosomal protein L11 methyltransferase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 320

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 35/149 (23%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   AL   L     R    I+D+GTG+G + +A  K     K    D+   A+E 
Sbjct: 163 PTTQLSLQALEMVL-----RGGESIIDVGTGSGVLSIA-AKLMGAKKITAYDVDDVAVES 216

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK N   N  +       +D    +    D++V+N                      ++ 
Sbjct: 217 AKKNMRLNPQAADIPVAVNDLLKGIHTQVDLVVAN---------------------ILA- 254

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       +      +L   G   +
Sbjct: 255 -------EIIVPLVPQAYENLKPGGHFLM 276


>gi|227513275|ref|ZP_03943324.1| ribosomal protein L11 methyltransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227083476|gb|EEI18788.1| ribosomal protein L11 methyltransferase [Lactobacillus buchneri
           ATCC 11577]
          Length = 320

 Score = 64.0 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 35/149 (23%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   AL   L     R    I+D+GTG+G + +A  K     K    D+   A+E 
Sbjct: 163 PTTQLSLQALEMVL-----RGGESIIDVGTGSGVLSIA-AKLMGAKKITAYDVDDVAVES 216

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK N   N  +       +D    +    D++V+N                      ++ 
Sbjct: 217 AKKNMRLNPQAADIPVAVNDLLKGIHTQVDLVVAN---------------------ILA- 254

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       +      +L   G   +
Sbjct: 255 -------EIIVPLVPQAYENLKPGGHFLM 276


>gi|120554408|ref|YP_958759.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
           aquaeolei VT8]
 gi|120324257|gb|ABM18572.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter
           aquaeolei VT8]
          Length = 424

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 41/212 (19%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVV 99
           K+ S H  LG   +R F +  +  SS  + PR ++ L  D A    L     +++     
Sbjct: 143 KNISAHYDLGNDLFRLFLDPTMMYSSAIY-PREDSTL--DEAAVHKLDTICRKLDLGPED 199

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++++GTG G   +   K           IS + LE+AK+     G+ ++   L  D + 
Sbjct: 200 RVVEIGTGWGGFAIHAAKHY-GCHVTTTTISREQLELAKARVKAEGLEDKITLLFDD-YR 257

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            ++G FD +VS        +++ +G +                L  Y      +S  L  
Sbjct: 258 DLQGQFDKLVS------IEMIEAVGPQF---------------LDSY---LSQISHLLKP 293

Query: 220 DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           DGL  +     Q +++      R L  V+  +
Sbjct: 294 DGLALI-----QAINMPEQRYHRALKNVDFIQ 320


>gi|288958806|ref|YP_003449147.1| ribosomal protein L11 methyltransferase [Azospirillum sp. B510]
 gi|288911114|dbj|BAI72603.1| ribosomal protein L11 methyltransferase [Azospirillum sp. B510]
          Length = 296

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 35/170 (20%)

Query: 84  SALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            AL      ++     R   LD+G G+G + LA+ K         VDI  +A+ + + NA
Sbjct: 141 QALDRLSRHLKLPRGGRRGALDMGCGSGILALAMAKRW-RVPVTAVDIDPEAVRVTRINA 199

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVS-NPPY-IESVIVDCLGLEVRDFDPRISLDGG 199
             NG          D      G    IV  + PY + +  +    L              
Sbjct: 200 ALNGQKGMIRAQGGD------GYHTRIVGRHKPYTLITANILARPLS------------- 240

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLV 247
                    +A  + RHL K G   +  G    Q+  V++   ++ L LV
Sbjct: 241 --------RMAPQLRRHLKKGGYAVL-AGLLNRQERHVIQAHRNQGLRLV 281


>gi|195334547|ref|XP_002033939.1| GM21591 [Drosophila sechellia]
 gi|194125909|gb|EDW47952.1| GM21591 [Drosophila sechellia]
          Length = 307

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 30/180 (16%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +++Y++ +  +  +  P    R    L ++  +           V+R +D+G G+  +  
Sbjct: 66  KEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEPL-----SLQVIRGIDIGCGSSCIYS 120

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSD-------WFSSVEG-- 163
            L  +   +  + ++   + +E A  N   N +    +   Q D       +F   +   
Sbjct: 121 LLGAKKNGWHMLALESKPQNIEYAMKNVKKNHLESLIEVYAQPDNTNIFKSYFEQDQRQL 180

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFD----PRISLDGGIDGL-------SHYRTIADG 212
            +   + NPP+ +S + + LG   R+ +    P  +  G  + L          + I D 
Sbjct: 181 QYQFCLCNPPFFDSNLPNPLGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDE 240


>gi|328474212|gb|EGF45017.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus 10329]
          Length = 341

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP +      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPNLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG+S R     SD +S     +  I+SNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTANDYRFIISNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +HL+  G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGHAPQHLSNHGEMII 305


>gi|237737638|ref|ZP_04568119.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229419518|gb|EEO34565.1| ribosomal protein L11 methyltransferase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 309

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 67/207 (32%), Gaps = 48/207 (23%)

Query: 64  RLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKRDVVRILDLGTGT 108
           +  +     E  PE + L+                  L   L      +   ++D+GTG+
Sbjct: 123 KFVVKPTWREYTPEADELIIELDPGRAFGTGSHPTTSLCLKLMEENISEGDSVIDVGTGS 182

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVE-GLFD 166
           G + +A        +  G DI   A+E AK N   N +  E+    + D  S VE   FD
Sbjct: 183 GILMIA-ADRLGASEIYGTDIDELAVESAKENLELNKISEEKAKVYKGDLISVVENKKFD 241

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
           V+V+N                      ++             +   +S+ +  +G     
Sbjct: 242 VVVAN---------------------ILA--------DVLLILLHDISKVVKPNGKIIFS 272

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKD 252
            I  ++   + R  ES    +     D
Sbjct: 273 GIIEDKCELLKREVESLGFTVEEIKAD 299


>gi|153838411|ref|ZP_01991078.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
 gi|149748218|gb|EDM59077.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio
           parahaemolyticus AQ3810]
          Length = 341

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP +      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPNLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG+S R     SD +S     +  I+SNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTANDYRFIISNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +HL+  G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGHAPQHLSNHGEMII 305


>gi|28899251|ref|NP_798856.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260362175|ref|ZP_05775165.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus K5030]
 gi|260879053|ref|ZP_05891408.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AN-5034]
 gi|260895928|ref|ZP_05904424.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus Peru-466]
 gi|260903439|ref|ZP_05911834.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AQ4037]
 gi|81726990|sp|Q87LY1|RSMC_VIBPA RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|28807475|dbj|BAC60740.1| putative 16S rRNA m2G 1207 methyltransferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308085366|gb|EFO35061.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus Peru-466]
 gi|308089537|gb|EFO39232.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AN-5034]
 gi|308106585|gb|EFO44125.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus AQ4037]
 gi|308111050|gb|EFO48590.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           parahaemolyticus K5030]
          Length = 341

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP +      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPNLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG+S R     SD +S     +  I+SNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLEANGLSGRVFA--SDIYSDTANDYRFIISNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     +HL+  G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGHAPQHLSNHGEMII 305


>gi|317470873|ref|ZP_07930254.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerostipes sp.
           3_2_56FAA]
 gi|316901700|gb|EFV23633.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerostipes sp.
           3_2_56FAA]
          Length = 452

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           I G   FY     ++  +S  +F    +T  L  +     +   + +     I DL +GT
Sbjct: 262 IYGEDFFYEEILGLKFKISPFSFF---QTNSLGAEVLYETAREYVGETKDKVIFDLYSGT 318

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E A+ NA  NG+ E  + +  D       +E  
Sbjct: 319 GTIAQMLA---PVAKKVVGVEIVEEAVEAARENAGFNGL-ENCEFIAGDVLKVIDELEDK 374

Query: 165 FDVIVSNPP 173
            D IV +PP
Sbjct: 375 PDFIVLDPP 383


>gi|313884198|ref|ZP_07817964.1| ribosomal protein L11 methyltransferase [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620645|gb|EFR32068.1| ribosomal protein L11 methyltransferase [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 320

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 56/170 (32%), Gaps = 41/170 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN---------AVTNGV 146
           R   R+LD+GTG+G +   +       +  G D+  +A+  A++N               
Sbjct: 170 RGGERVLDVGTGSGILAF-IAASLGASQVAGFDLDPQAVASAQANLTLQNHNSLIQDLEA 228

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             +     +D  + V+   D+IV+N   +  ++V+                         
Sbjct: 229 QGKIRFAVNDLLAGVDQRTDIIVAN--ILPHILVN------------------------- 261

Query: 207 RTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             + D     L   G   +  I   +   V++  +     LV    D  G
Sbjct: 262 --LFDQAYPLLTDQGYLILGGILEEKADFVIQAMDQHGFKLVQ-RTDLKG 308


>gi|297260579|ref|XP_002798309.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like
           [Macaca mulatta]
          Length = 566

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 336 EGLPLEHMAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSTV 392

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LD+  GTG + LAL ++    + +GV++  +A+E A+ NA  NG
Sbjct: 393 LDVCCGTGTIGLALARKVK--RVIGVELCPEAVEDARVNAQDNG 434


>gi|242399746|ref|YP_002995171.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM
           739]
 gi|242266140|gb|ACS90822.1| Probable tRNA/rRNA methyltransferase [Thermococcus sibiricus MM
           739]
          Length = 393

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 66/212 (31%), Gaps = 38/212 (17%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRI----LGWRDFYNV------RLTLSSDTFEPRPET 78
            ++            RS + E +  I    LG   +  +      +  +         +T
Sbjct: 140 EIEPEIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTIIKEGQAKFIVDMR----GQKT 195

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
              +D            +   ++LD+ T TG   +         K + VD S  A+E AK
Sbjct: 196 GFFLDQRENRIALEKYIKGGEKVLDVFTYTGGFAIHAAVAGAE-KVIAVDKSPAAIEQAK 254

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            NA  N V  + D L    FS +E        FD+++ +PP       D           
Sbjct: 255 ENAKLNDVDGKMDFLVGSAFSIMEKMQKKGEKFDIVILDPPAFVQHEKDL---------- 304

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                    GL  Y  +     + +   G+  
Sbjct: 305 -------KRGLRAYFNVNYQGLKLVKDGGILV 329


>gi|114765385|ref|ZP_01444500.1| ribosomal protein L11 methyltransferase, putative [Pelagibaca
           bermudensis HTCC2601]
 gi|114542228|gb|EAU45258.1| ribosomal protein L11 methyltransferase, putative [Roseovarius sp.
           HTCC2601]
          Length = 292

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 35/153 (22%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G GT  + +   +  P    +  DI   A+E+A++N   NG+  +   +++  F +
Sbjct: 153 VADIGCGTAVLAMGAARIWPDP-VMASDIDEVAVEVAEANVRANGLEGKVSCVEAAGFDN 211

Query: 161 VE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            E      FD++ +N           L   + D  P ++                    H
Sbjct: 212 PELAARAPFDLVFAN----------ILKQPLIDLAPHMA-------------------AH 242

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
           L   G   +  I   Q  +VV ++    +  ++
Sbjct: 243 LQPGGYAILSGILTRQADEVVEVYAQNGINQIH 275


>gi|115504421|ref|XP_001219003.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|83642485|emb|CAJ16516.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 559

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  LS  +F       +  +  L  ++   E      +LDL  GTG + +AL K    
Sbjct: 363 GLQFELSPTSFFQVNTAGM--ELLLRETVAVAELTPETTLLDLCCGTGTIGIALAKHVK- 419

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV--EGLFDVI-VSNP 172
            + +G+++   A+  A+ NA  NGV        R + L     S +  E   D++ + +P
Sbjct: 420 -RVIGIELVESAVRDARLNAERNGVRNATFNCGRVEHLLPSVISQLSPEDRKDIVAILDP 478

Query: 173 P 173
           P
Sbjct: 479 P 479


>gi|329731989|gb|EGG68345.1| methyltransferase small domain protein [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 105

 Score = 63.6 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 20/122 (16%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPET 78
           SH    DP SV+ + QR      I   L H  I  I     F   ++   SD        
Sbjct: 2   SHYYDEDP-SVISNEQR------IQYQLNHHKIDLITDNGVFSKDKVDYGSDVLV----- 49

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
                      L         RI D+G G G + L + K SP      +D++ +AL + +
Sbjct: 50  --------QTFLKAHPPGPSKRISDVGCGYGPIGLMIAKVSPHHSITMLDVNHRALALVE 101

Query: 139 SN 140
            N
Sbjct: 102 KN 103


>gi|71734107|ref|YP_273308.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|123637922|sp|Q48MR4|RSMC_PSE14 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|71554660|gb|AAZ33871.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 332

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G GTG +  A+ +  P    + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGTGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|326389917|ref|ZP_08211480.1| Protein of unknown function methylase putative [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993977|gb|EGD52406.1| Protein of unknown function methylase putative [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 391

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+E+AK N   NG  ER D +  + F
Sbjct: 218 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEMAKKNVELNGYQERCDFVCDNAF 276

Query: 159 SSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD I+ +PP             V+D     +L G       Y+ I   
Sbjct: 277 DLLRRYDKESRKFDTIILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 319

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 320 ALKILREGGFLI 331


>gi|325689541|gb|EGD31546.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK115]
          Length = 318

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIEADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAETAGFFL 292


>gi|227552632|ref|ZP_03982681.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX1330]
 gi|257888141|ref|ZP_05667794.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,141,733]
 gi|257896968|ref|ZP_05676621.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           Com12]
 gi|293378676|ref|ZP_06624835.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           PC4.1]
 gi|227178258|gb|EEI59230.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX1330]
 gi|257824195|gb|EEV51127.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,141,733]
 gi|257833533|gb|EEV59954.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           Com12]
 gi|292642716|gb|EFF60867.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           PC4.1]
          Length = 315

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          D+   A+  AK N   N V++      +
Sbjct: 174 RGGETLLDVGTGSGVLSIA-AKYLGAKDVYAFDLDEVAVRSAKENMDMNEVAKDVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +E   DVIV+N                      ++             +     R
Sbjct: 233 DLLKGIEIESDVIVAN---------------------ILA--------DIILLMIPDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L + G   V  I   +K  V+     +   +   F+
Sbjct: 264 LLKQTGTLIVSGIIEEKKQMVLDAMIEQGFIVDQIFQ 300


>gi|161507692|ref|YP_001577648.1| hypothetical protein lhv_1357 [Lactobacillus helveticus DPC 4571]
 gi|160348681|gb|ABX27355.1| hypothetical protein lhv_1357 [Lactobacillus helveticus DPC 4571]
 gi|328465736|gb|EGF36940.1| hypothetical protein AAULH_07876 [Lactobacillus helveticus MTCC
           5463]
          Length = 343

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  DLRIIQDKTAFSFSMDTLLLAYWAKNQI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    AK +   N +  R    + +  ++ +      +DV+  NPPY + 
Sbjct: 70  AHYDAIEIQDEIYSQAKRSIELNRMENRIAVHKDNVLNAAKFLRKDSYDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PEGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMFMVH 173


>gi|167648570|ref|YP_001686233.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter sp. K31]
 gi|167351000|gb|ABZ73735.1| Cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter sp. K31]
          Length = 398

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 9/118 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVC 112
           ++ F +  +  S   F  RP+  L  + A A     I  +      +++LD+G+G G + 
Sbjct: 127 YKRFLDADMQYSCAYFA-RPDMTL--EEAQAAKKAHIGAKLNIAPGMKVLDIGSGWGGMS 183

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L L  +    K  GV +S + L +A   A   G+S++ +   +D +  ++  FD IVS
Sbjct: 184 LTLAAD-HGAKMTGVTLSTEQLALATERAEKAGLSDQVEFRLTD-YRDLDETFDRIVS 239


>gi|255994151|ref|ZP_05427286.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium saphenum
           ATCC 49989]
 gi|255993819|gb|EEU03908.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium saphenum
           ATCC 49989]
          Length = 399

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 13/129 (10%)

Query: 53  RILGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           RIL  RD+Y     ++   +   +F  +   +   ++   +++  I+      I DL  G
Sbjct: 199 RILYGRDYYMERIMDLDFKVRMGSF-FQTNVQA-AENLYRYAINSIDNVQDKVIFDLFCG 256

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGL 164
           TG +  +L   +   K +GVDIS  A++ A  N   N +       + D F    ++   
Sbjct: 257 TGTITQSLAGAAK--KVIGVDISDDAIKSAIENTKLNKI-NNVSFYRGDVFEVIRNINEK 313

Query: 165 FDVIVSNPP 173
            DVIV +PP
Sbjct: 314 PDVIVLDPP 322


>gi|156935630|ref|YP_001439546.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894]
 gi|229564329|sp|A7MIS8|RLMG_ENTS8 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|156533884|gb|ABU78710.1| hypothetical protein ESA_03495 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 25/159 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     ++DLG G G + L LL ++P  K   VD S  A+  ++ N  
Sbjct: 212 DIGARFFMQHLPEAVEGEMVDLGCGNGVIGLTLLAQNPQAKVRFVDESYMAVASSRLNVE 271

Query: 143 TN--GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER +   ++  + VE   F  ++ NPP+ +   +             I+    
Sbjct: 272 TNLPEAMERCEFQVNNALTGVEPESFHAVLCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                    +     R L   G   + +G        ++
Sbjct: 319 --------QMFQDARRCLKWGGELRI-VGNRHLDYFRKL 348


>gi|144899240|emb|CAM76104.1| Ribosomal L11 methyltransferase [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 299

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 43/199 (21%)

Query: 64  RLTLSSDTF---EPRPETELLVDSA--------------LAFSLPRIEKRDVVRILDLGT 106
           R  +    +    P    ELLVD+               L       ++R  +  LDLG 
Sbjct: 109 RFFVRGSHWDGKVPTGRIELLVDAGTAFGSGEHATTRGCLTMLDKLGKRRRFLHPLDLGA 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VE 162
           G+G + + + K       +  DI   A+++A +NA  NGV  RF ++ SD + +      
Sbjct: 169 GSGILGIGMAKMWA-VDVLATDIDPSAVKVAANNARMNGVGSRFTSVVSDGYRNRALKQG 227

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-----GIDGLSHYRTIADGVSR-- 215
             FD+IV+N      ++   L    +D    ++ DG     G+  L     +  G     
Sbjct: 228 QPFDIIVAN------ILAKPLMRMAKDLAAHLAPDGVAVLSGL--LDWQERMVMGAHEPQ 279

Query: 216 --HLNK----DGLCSVEIG 228
              L +    DG  ++ IG
Sbjct: 280 GLRLRERIVIDGWATLLIG 298


>gi|320533776|ref|ZP_08034375.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134009|gb|EFW26358.1| conserved domain protein [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 267

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/151 (27%), Positives = 55/151 (36%), Gaps = 41/151 (27%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-------------- 148
           DLG G G   L LL+ + +   V  DIS +AL     NA   GVS               
Sbjct: 2   DLGCGCGIQTLYLLRHAEY--VVATDISARALAFTAFNAALAGVSVAGALGAGTESVAGS 59

Query: 149 ---------RFDTLQSDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGL-EVRDFDPRI 194
                    R + L+      V G  FD+IVSNPP++    +V    L L E RD     
Sbjct: 60  ESGSDSGAGRLELLRGSLLEPVAGRRFDLIVSNPPFVITPPAVREAGLPLMEYRD----- 114

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              GG         +  G+  HL       +
Sbjct: 115 --AGGP----VLPRLVAGLGEHLEPGASAVM 139


>gi|167516500|ref|XP_001742591.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779215|gb|EDQ92829.1| predicted protein [Monosiga brevicollis MX1]
          Length = 216

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 6/82 (7%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DLG G G + +A   +      + VDI   AL+IA  NA    + +  D + +D 
Sbjct: 50  GKTVVDLGCGCGMLSIACALQGAD-HVLAVDIDSAALDIALDNAARLELEDDIDFVLADA 108

Query: 158 FSSV-----EGLFDVIVSNPPY 174
              +         D +V NPP+
Sbjct: 109 PWPLALGPGARQVDTVVMNPPF 130


>gi|237743369|ref|ZP_04573850.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 7_1]
 gi|229433148|gb|EEO43360.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 7_1]
          Length = 312

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEKQDFSNKSVIDIGTGSGILMIA-GKLLGASEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD+++ N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVLCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V +  E   L +V    D    + R + 
Sbjct: 252 DVLVRLLDEIKYILKENSIVLFSGIIEDKLEEVTKKAEEVGLEVVEIKTD---KEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|68536169|ref|YP_250874.1| putative transferase [Corynebacterium jeikeium K411]
 gi|68263768|emb|CAI37256.1| putative transferase [Corynebacterium jeikeium K411]
          Length = 559

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 20/177 (11%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLALL--KESPFFKGVGVDI 129
            P P     V +A    L  I +     R+LDLGTG+G + L L    E    K  G DI
Sbjct: 148 VPGPGHVPGVGNAPLSLLNAIPQLPANARVLDLGTGSGVLALVLAANAEVEPPKIFGSDI 207

Query: 130 SCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVE-----------GLFDVIVSNPPYIES 177
             +AL  A++ A   G+     + +Q  WF                 FDVIV+NPP++  
Sbjct: 208 HARALNYARAAAAAQGLDSPLVNWVQGSWFEPFSAESADTESTEAQRFDVIVANPPFVIG 267

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
             VD L  E    +  +  D G+   +  + + +   +HL   G   + IG+    +
Sbjct: 268 PSVD-LEAE----EGHVYRDSGLPLDAASQLVVEQSVQHLAPGGHAHLLIGWALGEE 319


>gi|326385019|ref|ZP_08206691.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395]
 gi|326196233|gb|EGD53435.1| methyltransferase small [Gordonia neofelifaecis NRRL B-59395]
          Length = 502

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 15/150 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +  L +  A       + +    R LD+GTG G   L +       + V  D + +AL +
Sbjct: 140 DHVLGIGGASMSLAQAVIRTPFGRALDVGTGCGVQALHMASHCD--EIVATDTNRRALAL 197

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A + A  NG    +D  +   F  V G  FD+IVSNPP++                  I 
Sbjct: 198 AAATARLNGFD--WDLREGSLFEPVAGERFDLIVSNPPFVVGTGAQD----------YIY 245

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            D G+ G    R + + +  HLN  G+  +
Sbjct: 246 RDSGMVGDDISRQLVEQIGDHLNPGGVAQI 275


>gi|255264731|ref|ZP_05344073.1| methyltransferase small [Thalassiobium sp. R2A62]
 gi|255107066|gb|EET49740.1| methyltransferase small [Thalassiobium sp. R2A62]
          Length = 256

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 32/166 (19%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR      VD  L       E +   R+L+LG G GA  L L +        GV++  
Sbjct: 23  YQPRHGYRAGVDPVL--LAAATEAKSGDRVLELGCGAGAASLCLARRVEGLSLTGVELQP 80

Query: 132 KA------------LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                         L +   NA    +               +  FD +++NPPY +   
Sbjct: 81  AYAALAARNAKANDLSLTVINADLRALPMDLR----------QQQFDHVIANPPYFDRAT 130

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   RD    I+L G  D L+ +  I    ++ L   G  ++
Sbjct: 131 GSSATDTGRD----IALGGDTD-LADWVRI---AAKRLAPKGYLTM 168


>gi|169605651|ref|XP_001796246.1| hypothetical protein SNOG_05851 [Phaeosphaeria nodorum SN15]
 gi|160706808|gb|EAT86915.2| hypothetical protein SNOG_05851 [Phaeosphaeria nodorum SN15]
          Length = 430

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 25/177 (14%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRI----EKRDVVRILDLGTGTGAVC 112
           + ++L +  D   P    R      +   +  + P      +    +  LD+GTG  A+ 
Sbjct: 55  FGLQLEVPDDRLCPPIPNRWNYVTWIHGLIDSTSPDFSYGYDPERKITGLDIGTGASAIY 114

Query: 113 LAL-LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GL 164
             L LK  P ++    DI  K+ E A  N   N +  R   LQ+   + +          
Sbjct: 115 AMLSLKSRPDWRMCATDIDKKSFESAARNLALNNLMTRTTLLQTTELNPLIPLAGLGVQT 174

Query: 165 FDVIVSNPPYIESVI--VDCLGLEVRDFDPRISLDGGI------DG-LSHYRTIADG 212
            D  + NPP+  ++      L  E + + P     G        DG L     I + 
Sbjct: 175 LDFTMCNPPFFTNLDDMSASLKGEGKSWKPNAVCTGAEVEMVCPDGDLGFVTKIVNE 231


>gi|229470426|sp|Q9K3L9|RLMG_STRCO RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
          Length = 377

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 26/149 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R++DLG G G V  A+    P  + +  D S +A+  A++    N V+ + +    D  +
Sbjct: 236 RVVDLGCGNGVVGTAVSLADPDAELLFTDESFQAVASARATYRANEVAGQAEFRVGDGLA 295

Query: 160 SV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
            V +G  D++++NPP+                    +  G     +    +  G  R L 
Sbjct: 296 GVPDGSVDLVLNNPPFHS----------------HQATTG-----ATAWRMFTGARRVLR 334

Query: 219 KDGLCSVEIGYNQ---KVDVVRIFESRKL 244
             G   V +G       V + R+F + +L
Sbjct: 335 PGGELWV-VGNRHLGYHVRLRRLFGNSEL 362


>gi|295113644|emb|CBL32281.1| Predicted O-methyltransferase [Enterococcus sp. 7L76]
          Length = 244

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 77/190 (40%), Gaps = 27/190 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S + F         +D+ L  + P++ K+   +I+DL  G GAV L + +++  
Sbjct: 15  DIQIIQSKEVFSFS------IDAVLLANFPQLPKKG--KIVDLCAGNGAVGLFVSRKTA- 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                +++  +  ++ + + + N + ++    + D   + E       D+++ NPPY + 
Sbjct: 66  AMIDQIELQPRLADMGQRSILLNKLEKQVTMYERDLKQATEVIKKDSVDLVLCNPPYFKE 125

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                        +   +   SL          + +    +  L  +G  ++    ++ +
Sbjct: 126 RPTSQKNPNPHLAIARHEIHTSL----------QEVVTVSADLLKTNGRLAMVHRPDRFL 175

Query: 234 DVVRIFESRK 243
           D++   E+  
Sbjct: 176 DILHAMENAN 185


>gi|269123368|ref|YP_003305945.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
 gi|268314694|gb|ACZ01068.1| methyltransferase small [Streptobacillus moniliformis DSM 12112]
          Length = 237

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 25/163 (15%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   ++L++G+G G +   +L++    +  GV+I+  A  I+  N   N + +    + 
Sbjct: 36  NRKSKKLLEIGSGFGIIS-MILRKRTLAEITGVEINYDAYNISLENLKNNNI-DNIFFIN 93

Query: 155 SDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            D  +      E  +D+IVSNPPY        L   +     R +       LS  + I 
Sbjct: 94  EDILNYRKFLSEQTYDIIVSNPPYFTHKDEKQLKKNINL---RNARV--ESTLS-IKEIL 147

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL-VNAFKD 252
           +  +  L  +    +            IF + +L   +   KD
Sbjct: 148 NISTYLLKNNASLYL------------IFRTERLSEIIELLKD 178


>gi|171911114|ref|ZP_02926584.1| hypothetical protein VspiD_08060 [Verrucomicrobium spinosum DSM
           4136]
          Length = 412

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 10/104 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+   +G   +A  K     + +GVD+  KA+E A+ NA  N   +R D + +D F+
Sbjct: 242 RVLDVCCYSGGFSVA-AKLGGAAEVIGVDLDEKAVEQARKNANLN--QQRIDFVHADAFT 298

Query: 160 SVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISL 196
            +         +D +V +PP +          + R  D  +++L
Sbjct: 299 YMRQMQRNGATWDAVVLDPPKLVHSREGFEEGKARYHDLNKLAL 342


>gi|315231713|ref|YP_004072149.1| tRNA (Uracil54-C5-)-methyltransferase [Thermococcus barophilus MP]
 gi|315184741|gb|ADT84926.1| tRNA (Uracil54-C5-)-methyltransferase [Thermococcus barophilus MP]
          Length = 417

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)

Query: 58  RDFYNVRLT---LSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R F+N       L    +   P    +     A+       E  +  ++LDL +G G   
Sbjct: 232 RKFWNREFIKERLDDVVYLIHPNSFFQTNSYQAVNLVKKVAEFAEGKKVLDLYSGVGTFG 291

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           + L K+   F+  G++I+  A+E+A+ NA  N V  +F   +     ++ G +D IV +P
Sbjct: 292 IYLAKK--GFEVEGIEINPFAVEMARKNAEINNVDAKFYVGEDKSVGNL-GKYDTIVVDP 348

Query: 173 P 173
           P
Sbjct: 349 P 349


>gi|197336864|ref|YP_002158433.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio fischeri
           MJ11]
 gi|197314116|gb|ACH63565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio fischeri
           MJ11]
          Length = 418

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 36/181 (19%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   ++ F +  +  SS  +   P  E  ++ A    L     R+E +    +L++
Sbjct: 147 HYDLGNEMYKTFLDKEMLYSSAIY---PHQEANLEEAQLFKLQTICERLELKPGETLLEI 203

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   +     K     IS    E A+      G+ +    L+ D + ++EG 
Sbjct: 204 GTGWGALAIYAAQHY-GVKVTTTTISDAQYEYAEQRVKQLGLEDSITLLKQD-YRTLEGQ 261

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D +VS              +E    +   +               D  S+HL  +G   
Sbjct: 262 YDKLVS-----------IEMIEAVGHEYLSTFF-------------DVCSQHLKPEGKML 297

Query: 225 V 225
           +
Sbjct: 298 I 298


>gi|149191973|ref|ZP_01870203.1| 16S RNA G1207 methylase RsmC [Vibrio shilonii AK1]
 gi|148834199|gb|EDL51206.1| 16S RNA G1207 methylase RsmC [Vibrio shilonii AK1]
          Length = 376

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 35/194 (18%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           + + L+   + +     +   +D    F L  ++     + I+DLG G G + L L + +
Sbjct: 198 HKLVLSNLPNVY-----SGESLDLGARFILEHLKSNTKYQDIVDLGCGNGVLTLKLKQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF-DVIVSNPPYIES 177
           P      +D S  A++ A  N   N ++ +  + + ++     +    D++V NPP+ + 
Sbjct: 253 PQANITAIDESFMAVKSAHHNLTLNNLALDGCEFVANNCLDGFQANSQDLVVCNPPFHQ- 311

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKV 233
                    V D                   +     + L   G   V     +GY++K 
Sbjct: 312 ------QQAVTDH--------------IAWQMFCDAKQVLRDTGELMVIGNRHLGYDKK- 350

Query: 234 DVVRIFESRKLFLV 247
            + R+F    + LV
Sbjct: 351 -LARLFGKHNVKLV 363


>gi|327459572|gb|EGF05918.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1]
 gi|327490772|gb|EGF22553.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1058]
 gi|332358562|gb|EGJ36386.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1056]
 gi|332364868|gb|EGJ42637.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK1059]
          Length = 318

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIEADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAETAGFFL 292


>gi|302379428|ref|ZP_07267915.1| methyltransferase domain protein [Finegoldia magna ACS-171-V-Col3]
 gi|302312773|gb|EFK94767.1| methyltransferase domain protein [Finegoldia magna ACS-171-V-Col3]
          Length = 277

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 42/218 (19%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F ++ L +   TF+ R + + L  + +      +E  D    LD+G G+GA+ +A  K +
Sbjct: 70  FSSIMLYVMYRTFDYRGKRK-LAKTIIEGVAQYVEIPDGGVGLDVGCGSGALTIACAKRN 128

Query: 120 PFFKGVGVDI------SCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNP 172
           P    VG DI      +  + E+ ++NA   G+ + RF    +      +  FDV+ SN 
Sbjct: 129 PKATMVGCDIWSGSYKTEFSKELCENNAKLEGIENVRFKEGNAVNLPFEDESFDVVTSN- 187

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----- 227
            Y+   I+                 G        + +     R L K G+  +       
Sbjct: 188 -YVYHNIM-----------------GHNK-----QKLLLETLRVLKKGGVFVI-HDLIKK 223

Query: 228 -GYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
             Y      +   +      +       G   + +  R
Sbjct: 224 SNYGDIEKFIEELKEEGYEDIKLIDTTNG---MFVGHR 258


>gi|168699209|ref|ZP_02731486.1| oxidoreductase [Gemmata obscuriglobus UQM 2246]
          Length = 394

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + ++  ++  +   + +T   VD                R+LD+   TG   +       
Sbjct: 188 HGLKFRVAPGS---KHKTGFFVDQR-DNRKTLAGLCAGKRVLDICCNTGGFGVYAKALGG 243

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNP 172
             + VG+D+  +AL++AK NA  NG   R+  +Q+D F+ +         FD ++ +P
Sbjct: 244 AAEVVGLDLDEQALDMAKQNAKLNGAQVRY--VQADLFAWLRDVIPNGERFDTVILDP 299


>gi|148243968|ref|YP_001220207.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidiphilium cryptum
           JF-5]
 gi|146400531|gb|ABQ29065.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidiphilium cryptum
           JF-5]
          Length = 407

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 10/132 (7%)

Query: 44  RSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDV 98
           R++KH   H  +G   ++ F +  L  S   +    ET  +   A    +    I  R  
Sbjct: 122 RNVKH---HYDIGNDVYQIFLDSDLQYSCAYYPNGDETIDIAQIAKKRHILAKLILDRPN 178

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + +LD+G G G + L +  +      +G+ +S + + +A+  A   G++ +      D +
Sbjct: 179 LNVLDIGCGWGGMALTMAHDY-DANVIGITLSEEQIMVARQRAADAGLAHKCQFYLCD-Y 236

Query: 159 SSVEGLFDVIVS 170
            ++   FD IVS
Sbjct: 237 RTIFDKFDRIVS 248


>gi|291570492|dbj|BAI92764.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 220

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 28/146 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ A A     +  R    +LD GTGT  + + + K+ P ++ +G+D+S   L+I + N 
Sbjct: 27  VNRAFAEEAIAVLPRSEGMVLDAGTGTARIPILIAKQKPGWQIIGIDLSENMLKIGERNI 86

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              GVS + +    D      ++G FD+++SN       IV  LG               
Sbjct: 87  KAAGVSSQVELALVDAKKLPYIDGQFDLVISN------SIVHHLG--------------- 125

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D L         V R L   G   +
Sbjct: 126 -DPLPF----FCEVKRVLKPGGGIFL 146


>gi|298244023|ref|ZP_06967830.1| rRNA (guanine-N(2)-)-methyltransferase [Ktedonobacter racemifer DSM
           44963]
 gi|297557077|gb|EFH90941.1| rRNA (guanine-N(2)-)-methyltransferase [Ktedonobacter racemifer DSM
           44963]
          Length = 342

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 23/144 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +E +   + LDLG G G + L + + +   +   VD+S  A+  ++  A 
Sbjct: 182 DEGTRLLLDALEVKPTDQALDLGCGAGFIGLHIARLATRGQVTMVDVSLAAVATSRQQAA 241

Query: 143 TNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             G++     L SD    V    FD++ +NPP+ +                     GG+ 
Sbjct: 242 EQGLT-NVRILPSDGARVVYTEQFDLVATNPPFHQ---------------------GGLQ 279

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                       +  L   G   +
Sbjct: 280 TTEIAERFIRESAHILRPTGRLYL 303


>gi|297485088|ref|XP_002694704.1| PREDICTED: HpaII tiny fragments locus 9C [Bos taurus]
 gi|296478319|gb|DAA20434.1| HpaII tiny fragments locus 9C [Bos taurus]
          Length = 610

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           +   +  + G R    D   +   +S   F  +  T    +          +      +L
Sbjct: 365 EGLPLEHVAGDRCIREDVLGLTFRISPHAF-FQVNTAA-AEVLYTLIQDWAQLDAGSTVL 422

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D+  GTG + LAL ++    + VGV++S +A+E A+ NA+ N +S   +         V 
Sbjct: 423 DVCCGTGTIGLALARKVK--RVVGVELSQEAVEDARVNALDNELS-NVEFHCGRAEELVP 479

Query: 163 GLFDVIVS 170
            L   + S
Sbjct: 480 ALVSRLAS 487


>gi|327479677|gb|AEA82987.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           stutzeri DSM 4166]
          Length = 332

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 23/139 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++     R+LD G G G +   L +  P  + V +D+   A+E ++    
Sbjct: 177 DLGSALLLEHLDNLPGGRLLDFGCGAGILGATLKRRYPQSELVLLDVDAFAVESSRRTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + +  D   +       I+SNPP+ + V       E                
Sbjct: 237 ANGLEA--EVIAGDGIDAAPRQLAAIISNPPFHQGVHTSYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDG 221
                T+ +  + HL   G
Sbjct: 279 -----TLIERAAEHLQASG 292


>gi|325568306|ref|ZP_08144673.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158075|gb|EGC70228.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 315

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 63/230 (27%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ +Y+       + +  S + ++P  E E ++      +                  
Sbjct: 112 TAWKKYYHPVRISRYLTIVPSWENYQPLQEDEKIITLDPGMAFGTGTHPTTRLTLQALEV 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    +LD+GTG+G + +A  K          D+   A+  A+ N   N ++      
Sbjct: 172 YLRGGETVLDVGTGSGVLSIA-SKYLGAKDVFAYDLDEVAVRSAQENMAMNPIAHDVTVQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D    V    D+IV+N                      ++             +    
Sbjct: 231 ANDLLQGVTVPADLIVAN---------------------ILA--------DIILLMIPDA 261

Query: 214 SRHLNKDGLC----SVEI--------GYNQKVDVVRIFESRKLFLVNAFK 251
            R L ++G       +E            Q  ++ ++F  +  + +   K
Sbjct: 262 WRLLKQEGTLIVSGIIETKKQLVIDAMIAQGFEIDQLFNQKDWYAIAFKK 311


>gi|324990425|gb|EGC22363.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK353]
          Length = 317

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVEIEADVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-EMVRESAETAGFFL 291


>gi|259503161|ref|ZP_05746063.1| ribosomal protein L11 methyltransferase [Lactobacillus antri DSM
           16041]
 gi|259168876|gb|EEW53371.1| ribosomal protein L11 methyltransferase [Lactobacillus antri DSM
           16041]
          Length = 336

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 57/195 (29%), Gaps = 61/195 (31%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL--------------------------LVDSALAFSL 90
           W+ +Y+     +  T  P+ E                             L+  AL   +
Sbjct: 133 WQKYYHPLRVTNELTIVPQWEDYTPEQDSEKLLYLDPGMAFGTGTHPTTRLMLQALEQVI 192

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                R    ++D+GTG+G + +A  K+    +    D+   A++ AK N   N V+   
Sbjct: 193 -----RGGESLIDVGTGSGVLSIA-AKQLGAGQVAAYDVDDVAVQSAKKNLALNPVASDV 246

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               +     +    DVIV+N                      ++             + 
Sbjct: 247 RLGVNSLLDGIHTQVDVIVAN---------------------ILA--------EIIVPLI 277

Query: 211 DGVSRHLNKDGLCSV 225
                +L   G   +
Sbjct: 278 PQAYDNLKPGGRFLI 292


>gi|170591356|ref|XP_001900436.1| Hypothetical UPF0049 protein ZK1128.2 in chromosome III, putative
           [Brugia malayi]
 gi|158592048|gb|EDP30650.1| Hypothetical UPF0049 protein ZK1128.2 in chromosome III, putative
           [Brugia malayi]
          Length = 483

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 8/128 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + + +  D   PR    L     +   L      + V  +D+GTG   V   L  +  
Sbjct: 58  FGLDVDIPXDCLAPRIPQRLNYILVIDDLLKTNGIAEDVVGIDIGTGASCVYALLGAKQF 117

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--------WFSSVEGLFDVIVSNP 172
            ++ +  D    A+EIA  N   NG+SER + ++            S  E  F   + NP
Sbjct: 118 GWRFLATDADPFAVEIANRNVQKNGMSERIEVVRVPAGCMIKDVIRSHPEVEFTFCMCNP 177

Query: 173 PYIESVIV 180
           P+ E    
Sbjct: 178 PFYEYDEY 185


>gi|322386663|ref|ZP_08060288.1| ribosomal protein L11 methyltransferase [Streptococcus cristatus
           ATCC 51100]
 gi|321269336|gb|EFX52271.1| ribosomal protein L11 methyltransferase [Streptococcus cristatus
           ATCC 51100]
          Length = 318

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDKVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIEADVIVAN---------------------ILA--------DILIHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|160945353|ref|ZP_02092579.1| hypothetical protein FAEPRAM212_02873 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443084|gb|EDP20089.1| hypothetical protein FAEPRAM212_02873 [Faecalibacterium prausnitzii
           M21/2]
          Length = 409

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 25/130 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L   K     +    DIS +A+ +AK NA  NG+ +  D L  D F+ 
Sbjct: 239 VLDCFTHTGSFALNAAK-GGAARVTAADISAEAIAMAKRNAERNGL-DNMDFLCEDTFAL 296

Query: 161 VEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         +D I+ +PP                           + +  Y+ I     
Sbjct: 297 LPRLEKEGSPYDFIILDPPAFTKARRTV-----------------ENAMRGYKEINYRAM 339

Query: 215 RHLNKDGLCS 224
           + L + G  +
Sbjct: 340 KLLPRGGYLA 349


>gi|262281141|ref|ZP_06058923.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           calcoaceticus RUH2202]
 gi|262257372|gb|EEY76108.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           calcoaceticus RUH2202]
          Length = 337

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 56/188 (29%), Gaps = 38/188 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    RI D G G G +   L K +       +DI   AL   +    
Sbjct: 180 DVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFS 239

Query: 143 TNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG+ S++         +      D IVSNPP+ + +  +    E               
Sbjct: 240 RNGIGSDQLRLQPVIGIADAPTELDAIVSNPPFHQGIHTNYDASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255
           GL           +HL   G   +         V        I   +         D  G
Sbjct: 285 GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCQIKTDLQG 329

Query: 256 NDRVLLFC 263
              VL  C
Sbjct: 330 FK-VLYAC 336


>gi|69247930|ref|ZP_00604546.1| Ribosomal protein L11 methyltransferase [Enterococcus faecium DO]
 gi|257880294|ref|ZP_05659947.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,230,933]
 gi|257882149|ref|ZP_05661802.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,502]
 gi|257890953|ref|ZP_05670606.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,410]
 gi|257894208|ref|ZP_05673861.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,408]
 gi|258614758|ref|ZP_05712528.1| ribosomal protein L11 methyltransferase [Enterococcus faecium DO]
 gi|260562403|ref|ZP_05832917.1| ribosomal protein L11 methyltransferase [Enterococcus faecium C68]
 gi|261209223|ref|ZP_05923615.1| ribosomal protein L11 methyltransferase [Enterococcus faecium TC 6]
 gi|289566139|ref|ZP_06446574.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecium
           D344SRF]
 gi|293556304|ref|ZP_06674889.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1039]
 gi|293560714|ref|ZP_06677193.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1162]
 gi|293566149|ref|ZP_06678552.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1071]
 gi|294614193|ref|ZP_06694113.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1636]
 gi|294622230|ref|ZP_06701290.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           U0317]
 gi|314938566|ref|ZP_07845850.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133a04]
 gi|314940911|ref|ZP_07847817.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133C]
 gi|314948068|ref|ZP_07851470.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0082]
 gi|314952048|ref|ZP_07855071.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133A]
 gi|314991929|ref|ZP_07857384.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133B]
 gi|314995187|ref|ZP_07860301.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|68194632|gb|EAN09119.1| Ribosomal protein L11 methyltransferase [Enterococcus faecium DO]
 gi|257814522|gb|EEV43280.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,230,933]
 gi|257817807|gb|EEV45135.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,502]
 gi|257827313|gb|EEV53939.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,410]
 gi|257830587|gb|EEV57194.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,408]
 gi|260073327|gb|EEW61668.1| ribosomal protein L11 methyltransferase [Enterococcus faecium C68]
 gi|260076769|gb|EEW64504.1| ribosomal protein L11 methyltransferase [Enterococcus faecium TC 6]
 gi|289162084|gb|EFD09949.1| 50S ribosomal protein L11 methyltransferase [Enterococcus faecium
           D344SRF]
 gi|291291688|gb|ADD91679.1| 50S ribosomal protein L11 [Enterococcus faecium]
 gi|291590075|gb|EFF21867.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1071]
 gi|291592969|gb|EFF24558.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1636]
 gi|291598272|gb|EFF29365.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           U0317]
 gi|291601563|gb|EFF31830.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1039]
 gi|291605305|gb|EFF34760.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1162]
 gi|313590596|gb|EFR69441.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133a01]
 gi|313593513|gb|EFR72358.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133B]
 gi|313595838|gb|EFR74683.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133A]
 gi|313600269|gb|EFR79112.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133C]
 gi|313642123|gb|EFS06703.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0133a04]
 gi|313645484|gb|EFS10064.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           TX0082]
          Length = 315

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          D+   A+  AK N   N +++      +
Sbjct: 174 RGGETLLDVGTGSGVLSIA-AKYLGAKDVYAFDLDEVAVRSAKENMDMNEIAKDVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + +E   DVIV+N                      ++             +     R
Sbjct: 233 DLLTGIEIESDVIVAN---------------------ILA--------DIILLMIPDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L + G   V  I   +K  V+     +   +   F+
Sbjct: 264 LLKQTGTLIVSGIIEEKKQMVLDAMLEQGFIVDQIFQ 300


>gi|325066533|ref|ZP_08125206.1| methyltransferase family protein [Actinomyces oris K20]
          Length = 384

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 59/181 (32%), Gaps = 46/181 (25%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----- 148
            +  V   LDLG G G   L LL+ +     V  DIS +AL     N    GVS      
Sbjct: 9   PRTPVRTALDLGCGCGIQTLYLLRHAE--HVVATDISARALAFTAFNTALAGVSVTGSAP 66

Query: 149 -----------------RFDTLQSDWFSSVEG-LFDVIVSNPPYI---ESVIVDCLGL-E 186
                            R + L+      V G  FD+I SNPP++    +V    L L E
Sbjct: 67  CAASEADVKPGPASGSGRLELLRGSLLEPVAGRRFDLIASNPPFVLTPPAVREAGLPLME 126

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ------KVDVVRIFE 240
            RD        GG         +  G++ HL       +   +        +  V     
Sbjct: 127 YRD-------AGGP----ILPGLVAGLAEHLEPGATAVMLGNWEHRGTSSWREAVAAWLP 175

Query: 241 S 241
            
Sbjct: 176 E 176


>gi|260429628|ref|ZP_05783605.1| cyclopropane-fatty-acyl-phospholipid synthase [Citreicella sp.
           SE45]
 gi|260420251|gb|EEX13504.1| cyclopropane-fatty-acyl-phospholipid synthase [Citreicella sp.
           SE45]
          Length = 410

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 9/118 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVC 112
           +R F +  +  S   F  RP   L  + A       I ++      +R+LD+G G G + 
Sbjct: 133 YRIFLDSDMQYSCAYFI-RPGMTL--EEAQKAKKDHIARKLLIKPGMRVLDIGCGWGGMA 189

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L L ++       GV +S   L  A++ A   GV+ + D    D +  ++  FD IVS
Sbjct: 190 LTLARDY-GAHVTGVTLSENQLATAQARAEAEGVAGKVDFRLLD-YRKIDETFDRIVS 245


>gi|257389223|ref|YP_003178996.1| methyltransferase small [Halomicrobium mukohataei DSM 12286]
 gi|257171530|gb|ACV49289.1| methyltransferase small [Halomicrobium mukohataei DSM 12286]
          Length = 244

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 47/152 (30%), Gaps = 30/152 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD GTGTG +   L +          +   +  ++A+ N    GV +R D    D   
Sbjct: 89  RVLDAGTGTGVLAAYLARM--GVTVTTYERDPEFADVARENMAMAGVEDRVDVRSGDVTE 146

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +V+            +     D +           +LD G         + +     L  
Sbjct: 147 AVDA-----------LAETDFDVV-----------TLDTG-----DAAAVVERAPELLVP 179

Query: 220 DGLCSVEIGY-NQKVDVVRIFESRKLFLVNAF 250
            G  +V   +  Q  + ++      L      
Sbjct: 180 GGFLAVYSPFVEQAREAIQTARDAGLRDAETL 211


>gi|254507858|ref|ZP_05119988.1| ribosomal ribonucleate guanine-2-methyltransferase [Vibrio
           parahaemolyticus 16]
 gi|219549231|gb|EED26226.1| ribosomal ribonucleate guanine-2-methyltransferase [Vibrio
           parahaemolyticus 16]
          Length = 376

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 35/198 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKES 119
           ++++L    + +     +   +D    F LP +       R++DLG G G + + L + +
Sbjct: 198 HDIQLDNLPNVY-----SGESLDLGARFMLPNLPTGLGNKRVIDLGCGNGVLSVKLAQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
           P      VD S  A   A+ N   N  +      L ++     E    D++V NPP+ + 
Sbjct: 253 PDITLTCVDESFMATHSAQRNLDKNVPNGTNAKCLTNNCLDGFEAHSADLVVCNPPFHQQ 312

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKV 233
             +             I+             +       L+  G   V     +GY+   
Sbjct: 313 QAITD----------HIAW-----------QMFCDAKHVLSTGGQLLVIGNRHLGYD--G 349

Query: 234 DVVRIFESRKLFLVNAFK 251
            + R+F    +  V A K
Sbjct: 350 KLARLFGKSNVKQVAANK 367


>gi|109946712|ref|YP_663940.1| hypothetical protein Hac_0080 [Helicobacter acinonychis str.
           Sheeba]
 gi|109713933|emb|CAJ98941.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 238

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 12/130 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   ILD+G+G G + L   +++P      V+   K    ++ NA+    ++ F++   
Sbjct: 33  KNSGAILDIGSGCGILGLLCARDNPLASVHLVEKDSKMAFCSQKNALKFPNTQVFESNFL 92

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D+   +  L+DV+V NPP+     +                      L    ++   V +
Sbjct: 93  DFNPPI--LYDVVVCNPPFYALGSIKSKHKGHARHQSE---------LDFP-SLVSKVKK 140

Query: 216 HLNKDGLCSV 225
            L   G    
Sbjct: 141 CLKPKGYFIF 150


>gi|317498282|ref|ZP_07956581.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|316894491|gb|EFV16674.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 454

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     ++  +S  +F    +T  L  +     +   + +     I DL +GT
Sbjct: 264 LYGQDYFYEEILGLKFKISPFSFF---QTNTLGAEVLYKTARDFVGETKDKVIFDLYSGT 320

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E AK NA  NG+ +  + +  D       +E  
Sbjct: 321 GTIAQMLA---PVAKKVVGVEIVEEAVEAAKVNAELNGL-DNCEFIAGDVLKVVDELEDK 376

Query: 165 FDVIVSNPP 173
            D IV +PP
Sbjct: 377 PDFIVLDPP 385


>gi|283955917|ref|ZP_06373407.1| hypothetical protein C1336_000070063 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792577|gb|EFC31356.1| hypothetical protein C1336_000070063 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 233

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +++ + N  +N +         + F S++  FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIKLIEKNLKSNQIQGDIFHDDFNQFQSIK-KFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P               +     +  L  +G    
Sbjct: 117 EDQHKAISKFQEFLP-------------LHSFLTKANSMLKPNGTLYF 151


>gi|258626343|ref|ZP_05721190.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM603]
 gi|258581395|gb|EEW06297.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM603]
          Length = 413

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     +     IS +    AK      G
Sbjct: 185 MQCLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCRVTTTTISEEQFAYAKQKIAALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   LQ D +  +EG +D +VS
Sbjct: 244 LSEQITLLQQD-YRLLEGQYDKLVS 267


>gi|157414777|ref|YP_001482033.1| hypothetical protein C8J_0457 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157385741|gb|ABV52056.1| hypothetical protein C8J_0457 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747415|gb|ADN90685.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931075|gb|EFV10049.1| methyltransferase small domain protein [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 233

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +++ + N  +N +         + F S++  FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIKLIEKNLKSNQIQGDIFHDDFNQFQSIK-KFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P               +     +  L  +G    
Sbjct: 117 EDQHKAISKFQEFLP-------------LHSFLTKANSMLKPNGTLYF 151


>gi|149913260|ref|ZP_01901794.1| methyltransferase small [Roseobacter sp. AzwK-3b]
 gi|149813666|gb|EDM73492.1| methyltransferase small [Roseobacter sp. AzwK-3b]
          Length = 256

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 8/122 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   RL +S    +PR      VD  L      +  R    +LDLG G G   L L   
Sbjct: 14  DFLGGRLRIS----QPREGYRAGVDPVL--LAASVPARAGDTVLDLGCGVGVAGLCLASR 67

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSVEGL-FDVIVSNPPYIE 176
                  G+++ C    +A+ NA  NG++    T   SD         F  ++ NPPY +
Sbjct: 68  VDGLALAGLELQCAYAALARQNASVNGITMEVVTGDVSDMPEQFRQRQFTHVLVNPPYFD 127

Query: 177 SV 178
             
Sbjct: 128 RN 129


>gi|163847401|ref|YP_001635445.1| ribosomal protein L11 methyltransferase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525250|ref|YP_002569721.1| ribosomal protein L11 methyltransferase [Chloroflexus sp. Y-400-fl]
 gi|259534492|sp|A9WD89|PRMA_CHLAA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|259534495|sp|B9LFP4|PRMA_CHLSY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|163668690|gb|ABY35056.1| ribosomal protein L11 methyltransferase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449129|gb|ACM53395.1| ribosomal protein L11 methyltransferase [Chloroflexus sp. Y-400-fl]
          Length = 328

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 72/236 (30%), Gaps = 38/236 (16%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH--------RILGWRDFY-----NVRL 65
              + +D  +    +Q       + +      I             W+ FY       R 
Sbjct: 60  RTYLPLDAQAEETRQQIEHALWHVHQIRPLGPIQTRTLAEEDWANAWKQFYPVLRVGERT 119

Query: 66  TLSSDTFEPRP---ETELLVD------------SALAFSLPRIEKRDVVRILDLGTGTGA 110
            +     E +P   +  LL+D            + L   L     +   ++LDLGTG+G 
Sbjct: 120 VIVPSWLEYQPQPNDVVLLLDPGMAFGTGLHPTTRLCLHLLERLVQPGQQVLDLGTGSGI 179

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +A  K     + + +D    A+ +A  N   N V +     +    +         +S
Sbjct: 180 LAIAAAKLGAG-QVLALDNDPIAVRVAHENVERNQVQDLVTVAEGSLGAG--QAMGHWLS 236

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL--SHYRTIADGVSRHLNKDGLCS 224
                     +     + D  P+ + D     L       +A  ++  L   GL  
Sbjct: 237 -----GDFGPETPDPTLHDNTPQATFDLIAANLIAKVLVLLAPDLATALKPGGLLI 287


>gi|116747965|ref|YP_844652.1| type 12 methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116697029|gb|ABK16217.1| Methyltransferase type 12 [Syntrophobacter fumaroxidans MPOB]
          Length = 338

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R+ +RILD+G G+G    A    +    G G+DI   A+  A +N    G+ +RF  
Sbjct: 162 VSGRNPMRILDVGCGSGVFLHAAHSANRNATGAGLDIDEAAVRQATNNIAQWGLEDRFRI 221

Query: 153 LQSDWFSS---VEGLFDVI 168
              D       +EG FD+I
Sbjct: 222 FHGDTRHPPGGLEGPFDLI 240


>gi|71007547|ref|XP_758126.1| hypothetical protein UM01979.1 [Ustilago maydis 521]
 gi|46097408|gb|EAK82641.1| hypothetical protein UM01979.1 [Ustilago maydis 521]
          Length = 217

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 11/166 (6%)

Query: 69  SDTFEPRPETELLVDS--ALAFSLPRIEKRDVVRILDLGTGTGAVC--LALLKESPFFKG 124
              +EP  ++ +L+D+  A A +L           +++G+G+G V   ++ +        
Sbjct: 16  RSVYEPAEDSFILLDALEADAETLTSSLANKAPICVEIGSGSGIVTTFISQILGPTCASY 75

Query: 125 VGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +D++  A    ++  + NGV       +L S   S + G  DV++ NPPY+ +   + 
Sbjct: 76  LAIDLNAHANTCTRATGIANGVQIEPVRTSLLSGLRSRLNGQVDVLLFNPPYVPTEEEEE 135

Query: 183 LGLEVR-DFDPRISLDGGIDGLSHYRTIADG--VSRHLNKDGLCSV 225
           +  + +   +   +  GG  G      + DG  +   L + G   +
Sbjct: 136 MMAQGKGGIEGSWA--GGETGTKLVDELIDGGIIFNILAQKGRFYL 179


>gi|294793441|ref|ZP_06758578.1| SAM-dependent methyltransferase [Veillonella sp. 3_1_44]
 gi|294455011|gb|EFG23383.1| SAM-dependent methyltransferase [Veillonella sp. 3_1_44]
          Length = 241

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   SD F    +   L+         R   R     +DLGTG+G + L +      
Sbjct: 14  GLQIYQRSDMFRFSFDAIALIH------FCRFNGRHTY--VDLGTGSGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGL-FDVIVSNPPYIE 176
               G++I+   +E+AK +   N   +  + L  D+    +  ++   FD ++ NPP+ +
Sbjct: 65  GHITGIEINETLVELAKRSVEHNRKQDVVNMLCGDYRHMTYRDIQDKPFDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E    +  ++L  G   L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSE----ERTLALHDGHTTLCD---VLKAVQSFIKCKGRLWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAF 250
              E          
Sbjct: 178 HELERFNFQAKRIR 191


>gi|254470119|ref|ZP_05083523.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
 gi|211960430|gb|EEA95626.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
          Length = 267

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 25/153 (16%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK------SNA 141
           +    + +     + DLGTG G          P  K VGV++      +A+       NA
Sbjct: 41  YLAASLPESTAGTLYDLGTGVGTAAFCAAHRLPAIKAVGVEVDPVTAALARKGLSLPENA 100

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF---------DVIVSNPPYIESVIVDCLGLEVRDFDP 192
                ++R   L+++  +               D ++ NPPY +S          R   P
Sbjct: 101 S---FADRVSILEANLTAKGSIRHQSGLGSSIADHVIMNPPYYDSTRFRVTPQSDRA--P 155

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +LD    G              L   G  S+
Sbjct: 156 AHALD--ERG---IEPWIKTAKDLLKDGGTLSI 183


>gi|167766442|ref|ZP_02438495.1| hypothetical protein CLOSS21_00948 [Clostridium sp. SS2/1]
 gi|167711851|gb|EDS22430.1| hypothetical protein CLOSS21_00948 [Clostridium sp. SS2/1]
 gi|291560880|emb|CBL39680.1| 23S rRNA m(5)U-1939 methyltransferase [butyrate-producing bacterium
           SSC/2]
          Length = 543

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     ++  +S  +F    +T  L  +     +   + +     I DL +GT
Sbjct: 262 LYGQDYFYEEILGLKFKISPFSFF---QTNTLGAEILYKTARDFVGETKDKVIFDLYSGT 318

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E AK NA  NG+ +  + +  D       +E  
Sbjct: 319 GTIAQMLA---PVAKKVVGVEIVEEAVEAAKVNAELNGL-DNCEFIAGDVLKVVDELEDK 374

Query: 165 FDVIVSNPP 173
            D IV +PP
Sbjct: 375 PDFIVLDPP 383


>gi|326804056|ref|YP_004321874.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651694|gb|AEA01877.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Aerococcus urinae ACS-120-V-Col10a]
          Length = 184

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 44/139 (31%), Gaps = 29/139 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +L  +E     R LD+G GTG++ L   +E P      ++    A+++ K N    G+
Sbjct: 20  AVALDLLELHQARRFLDIGAGTGSISLQAAQEYPDLDVYAIEHKEAAVDLIKENRAHFGL 79

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
                 L     +   G FD I                             GG  G    
Sbjct: 80  KNYQVFLGEAPMTEDLGHFDAI---------------------------FIGGSGG--KL 110

Query: 207 RTIADGVSRHLNKDGLCSV 225
             I D     LN  G   +
Sbjct: 111 LEIIDWAYELLNPGGRLVL 129


>gi|260101376|ref|ZP_05751613.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
 gi|260084828|gb|EEW68948.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
          Length = 343

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A           D  ++ DL  G  A  + +      
Sbjct: 17  DLRIIQDKTAFSFSMDTLLLAYWAKNQI------HDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    AK +   N +  R    + +  ++ +      +DV+  NPPY + 
Sbjct: 70  AHYDAIEIQDEIYSQAKRSIELNRMENRIAVHKDNVLNAAKFLRKDSYDVVTVNPPYFKV 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PEGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMFMVH 173


>gi|261855970|ref|YP_003263253.1| ribosomal protein L11 methyltransferase [Halothiobacillus
           neapolitanus c2]
 gi|261836439|gb|ACX96206.1| ribosomal protein L11 methyltransferase [Halothiobacillus
           neapolitanus c2]
          Length = 303

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 33/152 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS 155
           + +R+LD+G G+G + LA L +       G DI  +AL+ ++ NA  N +  +RF     
Sbjct: 166 NGLRVLDVGCGSGILALAALMKGASV-AYGTDIDPQALKASRDNAALNDIPEDRFWLGLP 224

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +  ++ E  FDV+++N   +   +++                           +A  ++ 
Sbjct: 225 EELAA-EEKFDVLIAN--ILAQPLIE---------------------------LAPTLAP 254

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           HL K G  ++  I   Q   V   + ++ L +
Sbjct: 255 HLKKGGRFALSGILNTQAEAVAAQWMAQGLTI 286


>gi|289547839|ref|YP_003472827.1| ribosomal L11 methyltransferase [Thermocrinis albus DSM 14484]
 gi|289181456|gb|ADC88700.1| ribosomal L11 methyltransferase [Thermocrinis albus DSM 14484]
          Length = 239

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 30/158 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
                LD+G G+G + +AL K     + + +DI  +A+E  K NA  NGVS +       
Sbjct: 109 PGWTALDVGCGSGILSIALAKLGAR-EVLAIDIDERAVEETKENAKRNGVSLQVKQATP- 166

Query: 157 WFSSVEGLFDVIVSN---PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             + +E  +  +V+N   P + +          VR       +  G+ G           
Sbjct: 167 --ADLEESYQFLVANLELPIFEKEATHIKRLFSVRG------VFSGLYGGDDLEKFLKLF 218

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             H                  VV+I + R  + V   K
Sbjct: 219 QDH-----------------KVVKIVKMRGWYGVVLEK 239


>gi|126663522|ref|ZP_01734519.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
           BAL38]
 gi|126624470|gb|EAZ95161.1| putative SAM-dependent methyltransferase [Flavobacteria bacterium
           BAL38]
          Length = 302

 Score = 63.6 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 13/134 (9%)

Query: 59  DFYNVR-LTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            FY ++   +      P    R E    V   L  +   I+ +  +RILD+G G   +  
Sbjct: 64  HFYGLKNWDIPKGFLCPPIPGRAEYIHQVADILEDTYGTIQTKHKIRILDVGIGANCIYP 123

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSV---EGLF 165
            +      ++ VG +I  +A E A+ N  +N      V+ R    + + F ++   E  F
Sbjct: 124 IIGVSEYDWRFVGSEIDKQAFEAAQENINSNQKLKENVALRLQNSKRNIFKNIILPEDKF 183

Query: 166 DVIVSNPPYIESVI 179
           D+ + NPP+  S  
Sbjct: 184 DMTICNPPFHSSKE 197


>gi|257866972|ref|ZP_05646625.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC30]
 gi|257873306|ref|ZP_05652959.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC10]
 gi|257801028|gb|EEV29958.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC30]
 gi|257807470|gb|EEV36292.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC10]
          Length = 315

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 63/230 (27%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETE--LLVDSALAFSLPRIEK---------- 95
             W+ +Y+       + +  S + ++P  E E  +++D  +AF                 
Sbjct: 112 TAWKKYYHPVRISRYLTIVPSWENYQPLQEDEKIIILDPGMAFGTGTHPTTRLTLQALEV 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    +LD+GTG+G + +A  K          D+   A+  A+ N   N ++      
Sbjct: 172 YLRGGETVLDVGTGSGVLSIA-SKYLGAKDVFAYDLDEVAVRSAQENMAMNPIAHDVTVQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D    V    D+IV+N                      ++             +    
Sbjct: 231 ANDLLQGVTVPADLIVAN---------------------ILA--------DIILLMIPDA 261

Query: 214 SRHLNKDGLC----SVEI--------GYNQKVDVVRIFESRKLFLVNAFK 251
            R L ++G       +E            Q  ++ ++F  +  + +   K
Sbjct: 262 WRLLKQEGTLIVSGIIETKKQLVIDAMIAQGFEIDQLFNQKDWYAIAFKK 311


>gi|167574653|ref|ZP_02367527.1| ribosomal protein L11 methyltransferase [Burkholderia oklahomensis
           C6786]
          Length = 300

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGSVTGIDIDPQAVEAARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVAYGLPDDCPDGEFDIVVAN 234


>gi|116749298|ref|YP_845985.1| hypothetical protein Sfum_1865 [Syntrophobacter fumaroxidans MPOB]
 gi|116698362|gb|ABK17550.1| SAM-dependent methyltransferase [Syntrophobacter fumaroxidans MPOB]
          Length = 389

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE------TELLVDSALAFSLPRIEKRD 97
           R L+   + + L + +     + ++ D  E R +      T L +D         +    
Sbjct: 159 RRLEGLPLEKGLAFGEL-PEDIRVNIDGLELRVDPLGGQKTGLFLDQR-DNRRALLRWIG 216

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL   TGA  LA        + VGVD S +A++ A+SNA  N V++R + ++S+ 
Sbjct: 217 GKRVLDLFCYTGAWGLA-AARGGASRVVGVDASAEAVDQARSNAAANNVADRCEFIRSEA 275

Query: 158 FSSV----EGLFDVIVSNPP 173
              +    +G FDVIV +PP
Sbjct: 276 LQYLRTLRKGDFDVIVLDPP 295


>gi|302871980|ref|YP_003840616.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574839|gb|ADL42630.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 389

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  NGV  + + + ++ F  
Sbjct: 218 VLDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNGVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-MHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|282864072|ref|ZP_06273129.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces sp. ACTE]
 gi|282561150|gb|EFB66695.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces sp. ACTE]
          Length = 386

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  + +R    R++DLG G G V  A    +P      +D S +A+  A+   
Sbjct: 226 DIGTRFFLKHLPRRSGPDRVVDLGCGNGVVGTAAALAAPESCVTFIDESYQAVASAEETF 285

Query: 142 VTNGVSE-RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
             N  +      +  D  + V     D+++SNPP+     V                   
Sbjct: 286 RANAPAGAEARFVVGDAMADVPEQSVDLVLSNPPFHSHQAVTD----------------- 328

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGY---NQKVDVVRIF 239
               +  RT+  G    L   G   V +G         + RIF
Sbjct: 329 ----ATARTMFRGARAALRPGGELWV-VGNRHLGHHTQLRRIF 366


>gi|257877048|ref|ZP_05656701.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC20]
 gi|257811214|gb|EEV40034.1| ribosomal protein L11 methyltransferase [Enterococcus casseliflavus
           EC20]
          Length = 315

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 63/230 (27%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ +Y+       + +  S + ++P  E E ++      +                  
Sbjct: 112 TAWKKYYHPVRISRYLTIVPSWENYQPLQEEEKIITLDPGMAFGTGTHPTTRLTLQALEV 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R    +LD+GTG+G + +A  K          D+   A+  A+ N   N ++      
Sbjct: 172 YLRGGETVLDVGTGSGVLSIA-SKYLGAKDVFAYDLDEVAVRSAQENMAMNPIAHDVTVQ 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D    V    D+IV+N                      ++             +    
Sbjct: 231 ANDLLQKVTVPADLIVAN---------------------ILA--------DIILLMIPDA 261

Query: 214 SRHLNKDGLC----SVEI--------GYNQKVDVVRIFESRKLFLVNAFK 251
            R L ++G       +E            Q  ++ ++F  +  + +   K
Sbjct: 262 WRLLKQEGTLIVSGIIETKKQLVIDAMIAQGFEIDQLFNQKDWYAIAFKK 311


>gi|78224576|ref|YP_386323.1| 50S ribosomal protein L11P methyltransferase [Geobacter
           metallireducens GS-15]
 gi|123570746|sp|Q39Q76|PRMA_GEOMG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|78195831|gb|ABB33598.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 299

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 23/136 (16%)

Query: 55  LGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR--------- 100
            GWR  +       +L +        PE   LV                 R         
Sbjct: 103 TGWRQHFAPTRIGRKLVIKPTWEPFSPEPGDLVIELDPGMAFGTGTHPTTRLCLEALEKL 162

Query: 101 -----ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LD+GTG+G + +A   +    + VG DI   A+ +A+ N   NGV+     L +
Sbjct: 163 GTAGDVLDVGTGSGILAMA-AVKLGAQRVVGTDIDPDAVAVARENCAMNGVTAE---LVT 218

Query: 156 DWFSSVEGLFDVIVSN 171
              + + G F V+++N
Sbjct: 219 TPLADIPGQFSVVLAN 234


>gi|328782578|ref|XP_393721.4| PREDICTED: hypothetical protein LOC410239 [Apis mellifera]
          Length = 1110

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 11/162 (6%)

Query: 101  ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            I+D   G G   +         + + +DI    +E+A++NA   GV +R + +  D+F+ 
Sbjct: 954  IIDAFCGAGGNAIQFA--FTCERVLAIDIDPVKIELARNNARIYGVDDRIEFIVGDFFTL 1011

Query: 161  VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
               L  DV+  +PP+           E  D +  +   GG +  +  R I D V+  L +
Sbjct: 1012 ASKLIADVVFLSPPWGGPGYAKN---ETFDLNNIMHPIGGENLFNIARKITDHVAYFLPR 1068

Query: 220  D---GLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
            +      ++  G    V+V + F  +KL  + A+  YG   R
Sbjct: 1069 NVDTMQLAMLAGVGGGVEVEQNFLDKKLIALTAY--YGELPR 1108


>gi|262405018|ref|ZP_06081570.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586]
 gi|262348857|gb|EEY97998.1| ribosomal protein L11 methyltransferase [Vibrio sp. RC586]
          Length = 295

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLLADVVVANIL----AGP-----LRELSPIIKGLLKSGGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|207110912|ref|ZP_03245074.1| protoporphyrinogen oxidase (hemK) [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 76

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            +  +  I ++G G+  V ++L  E+P       DIS KALE+A  N     + ER    
Sbjct: 1   SQYHLKEIGEIGIGSACVSVSLALENPKISIHASDISLKALEVASKNIERFNLKERVFLK 60

Query: 154 QSDWFSSVE 162
           Q+  +  + 
Sbjct: 61  QTHLWDRMP 69


>gi|194873870|ref|XP_001973294.1| GG13433 [Drosophila erecta]
 gi|190655077|gb|EDV52320.1| GG13433 [Drosophila erecta]
          Length = 615

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 19/134 (14%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHE-------SIHRILGWRDF----YNVRLTLSSDTF--EP 74
             L     +  T+   + +KH         +  I G          ++  +S   F    
Sbjct: 337 EELAKDAPYKCTSLYYQDVKHREAGQMINPVEHIWGSTHITDTIQGLQFRISPLAFFQIN 396

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
                +L   A+    P  +      +LD+  GTG + LA  K     K +GV+I   A+
Sbjct: 397 TEGANVLYQKAIDLVAPTKD----TTMLDICCGTGTITLAFAKHCR--KVMGVEIVPDAI 450

Query: 135 EIAKSNAVTNGVSE 148
           + A+ NA  NG+  
Sbjct: 451 KDAEFNAEANGIKN 464


>gi|90424781|ref|YP_533151.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisB18]
 gi|90106795|gb|ABD88832.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisB18]
          Length = 296

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D+ L    PR        +LDLGTGTG + +A  K     +    DI   ++ +A+ 
Sbjct: 144 LLLDAVLKRRSPR-------NVLDLGTGTGVLAIAAAKALQQ-RVTASDIDPVSVRVARD 195

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSN 171
           NA  NGV    D + +  F+  +      FD++++N
Sbjct: 196 NARLNGVGHLLDGICAAGFADAQFRQAAPFDLVLAN 231


>gi|110633342|ref|YP_673550.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium sp.
           BNC1]
 gi|110284326|gb|ABG62385.1| cyclopropane-fatty-acyl-phospholipid synthase [Chelativorans sp.
           BNC1]
          Length = 417

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 70/174 (40%), Gaps = 33/174 (18%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            + P P+  L  + A       I  +       ++LD+G+G G + L + ++      +G
Sbjct: 146 AYYPDPDISL--EEAQKLKKSHIMAKLALEPGQKVLDIGSGWGGLGLDIARQF-DANVLG 202

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           V +S +   +++  A   G+++R      D + +++G FD IVS                
Sbjct: 203 VTLSEEQHAVSQRRAKEAGLADRARFEIVD-YRALKGPFDRIVS---------------- 245

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIF 239
           V  F+          G++HYRT     ++ L  DG+  +  IG      V   F
Sbjct: 246 VGMFE--------HVGINHYRTFFKKCAQLLADDGVMLLHTIGRTSGPSVTNAF 291


>gi|154252877|ref|YP_001413701.1| ribosomal L11 methyltransferase [Parvibaculum lavamentivorans DS-1]
 gi|154156827|gb|ABS64044.1| ribosomal L11 methyltransferase [Parvibaculum lavamentivorans DS-1]
          Length = 310

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 64/198 (32%), Gaps = 57/198 (28%)

Query: 73  EPRPETELLVDSA--------------LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            P     +LVD+A              L F    +     V  LD+GTGTG + +A+ K 
Sbjct: 132 IPAGTIPILVDAAQAFGTGHHETTAGCLEFISELVRPGRPVDALDIGTGTGVLAIAIAK- 190

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--SSVEGL--FDVIVSNPPY 174
                 +  DI   ++++A+ NA  NGV      + +  F  +++     + +IV+N   
Sbjct: 191 LARVNVLASDIDPVSVKVARENARKNGVGPFVTAVTAKGFGHTALHARAPYGLIVAN--- 247

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIG--Y 229
                                           R +         HL   G   +  G   
Sbjct: 248 -----------------------------ILARPLVSLAPAFAAHLKPGGTLIL-SGLLA 277

Query: 230 NQKVDVVRIFESRKLFLV 247
            Q+  V      + L LV
Sbjct: 278 TQEAMVTSAMRMQGLRLV 295


>gi|330444964|ref|ZP_08308618.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328493082|dbj|GAA03115.1| ribosomal protein L11 methyltransferase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 294

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +L+D  LAF           L  ++ +D+    I+D G 
Sbjct: 109 FGRRLWICPSWREAPEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTIIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165
           G+G + +A   +    K +G+DI  +A+  ++ NA  NGVSE  +          EG   
Sbjct: 169 GSGILAIA-ALKLGAAKVIGIDIDPQAILASRDNAERNGVSENLELYLPK--DQPEGIQA 225

Query: 166 DVIVSN 171
           D++V+N
Sbjct: 226 DIVVAN 231


>gi|318605077|emb|CBY26575.1| cobalt-precorrin-6y C15-methyltransferase [decarboxylating]
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 189

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+   D   ++D+GTGTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 17  EAVRVLALERLSLSDATHLIDVGTGTGSVALEAALRFPDLRVTAIERNPVALELINENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G   + D +       +    D I                             GG  G
Sbjct: 77  RLGCR-KVDIIAGVAPLPLSDKADAI---------------------------FIGGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 109 --HLTDLIDWSLMMLNPGGRLVL 129


>gi|284045832|ref|YP_003396172.1| homocysteine S-methyltransferase [Conexibacter woesei DSM 14684]
 gi|283950053|gb|ADB52797.1| homocysteine S-methyltransferase [Conexibacter woesei DSM 14684]
          Length = 578

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 11/137 (8%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R       R LD+G G+G + + L +         +D    A++   +NA  NGV++R
Sbjct: 372 LDRERVGAHRRCLDVGCGSGLLAVQLARNGAT-HVHALDADPAAVKNTLTNAFRNGVADR 430

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
                +D +  V +  +DVIV+N   + +              P         G +    
Sbjct: 431 VTAHAADLYPWVPDERYDVIVANLCQLPADPSGA---------PGRGRTADFWGRTLIDH 481

Query: 209 IADGVSRHLNKDGLCSV 225
           +   +   L  DG   +
Sbjct: 482 LIRLLPEALADDGAAYL 498


>gi|251810995|ref|ZP_04825468.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875996|ref|ZP_06284863.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           SK135]
 gi|293366461|ref|ZP_06613138.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|251805505|gb|EES58162.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295021|gb|EFA87548.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           SK135]
 gi|291319230|gb|EFE59599.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735232|gb|EGG71524.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           VCU045]
          Length = 312

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  
Sbjct: 172 KPTDSVIDVGTGSGILSIA-SHLLGVQRIKALDIDEMAVNVAKENFKKNHCDDAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +   +    F+++++N   I + I++ +  +  +     +L    DG      I +   +
Sbjct: 231 NLLKNENEKFNIVIAN---ILAHIIEEMIEDTYN-----TLI--EDGYFITSGIIEE--K 278

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +                 D+    +     +++   D
Sbjct: 279 Y----------------QDIESQMKRIGFKIISVEHD 299


>gi|242242853|ref|ZP_04797298.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           W23144]
 gi|242233695|gb|EES36007.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           W23144]
 gi|319400914|gb|EFV89133.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           FRI909]
          Length = 312

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  
Sbjct: 172 KPTDSVIDVGTGSGILSIA-SHLLGVQRIKALDIDEMAVNVAKENFKKNHCDDAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +   +    F+++++N   I + I++ +  +  +     +L    DG      I +   +
Sbjct: 231 NLLKNENEKFNIVIAN---ILAHIIEEMIEDTYN-----TLI--EDGYFITSGIIEE--K 278

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +                 D+    +     +++   D
Sbjct: 279 Y----------------QDIESQMKRIGFKIISVEHD 299


>gi|27468183|ref|NP_764820.1| methyltransferase [Staphylococcus epidermidis ATCC 12228]
 gi|57867035|ref|YP_188722.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           RP62A]
 gi|38605282|sp|Q8CSC7|PRMA_STAES RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|81819386|sp|Q5HNW8|PRMA_STAEQ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|27315729|gb|AAO04864.1|AE016748_98 probable methyltransferase [Staphylococcus epidermidis ATCC 12228]
 gi|57637693|gb|AAW54481.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           RP62A]
 gi|329737421|gb|EGG73675.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           VCU028]
          Length = 312

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  
Sbjct: 172 KPTDSVIDVGTGSGILSIA-SHLLGVQRIKALDIDEMAVNVAKENFKKNHCDDAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +   +    F+++++N   I + I++ +  +  +     +L    DG      I +   +
Sbjct: 231 NLLKNENEKFNIVIAN---ILAHIIEEMIEDTYN-----TLI--EDGYFITSGIIEE--K 278

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +                 D+    +     +++   D
Sbjct: 279 Y----------------QDIESQMKRIGFKIISVEHD 299


>gi|254230484|ref|ZP_04923859.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio sp.
           Ex25]
 gi|262393361|ref|YP_003285215.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. Ex25]
 gi|151936990|gb|EDN55873.1| ribosomal RNA small subunit methyltransferase C
           (rRNA(guanine-N(2)-)-methyltransferase) [Vibrio sp.
           Ex25]
 gi|262336955|gb|ACY50750.1| ribosomal RNA small subunit methyltransferase C [Vibrio sp. Ex25]
          Length = 341

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 32/171 (18%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG +   ++ +      F        L    L  +LP +      ++LD G G G +   
Sbjct: 167 LGEQ---SLTVKSLPGVFSHGEFD--LGSRLLLETLPTLSG----KVLDFGCGAGVLGAF 217

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + K +P       DI+  A+  +++    NG++       SD +S     +  I+SNPP+
Sbjct: 218 MAKANPEIAIEMCDINAYAITSSQATLKANGLTGHVFA--SDIYSDTADDYRFIISNPPF 275

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +  +    E                     T+     ++L+  G   +
Sbjct: 276 HSGLDTNYNAAE---------------------TLLGQAPKYLDSHGEMII 305


>gi|289167411|ref|YP_003445680.1| ribosomal protein methyltransferase [Streptococcus mitis B6]
 gi|288906978|emb|CBJ21812.1| ribosomal protein methyltransferase [Streptococcus mitis B6]
          Length = 325

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 178 RGGETVLDVGTGSGVLSIA-SSLLGATEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 236

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 237 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 267

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 268 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 299


>gi|323143727|ref|ZP_08078395.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT
           12066]
 gi|322416440|gb|EFY07106.1| ribosomal protein L11 methyltransferase [Succinatimonas hippei YIT
           12066]
          Length = 293

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 11/95 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + +A LK     +  GVDI  +ALE ++ NA  NGV ++         SS
Sbjct: 161 VLDYGCGSGILAIAALKLGAK-EAYGVDIDPQALEASEENAKRNGVLDKLTLCDGKKSSS 219

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           V     V V+N           L   + + +P I+
Sbjct: 220 VLTPAPVTVAN----------ILCGPLAELEPHIA 244


>gi|134299906|ref|YP_001113402.1| PUA domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134052606|gb|ABO50577.1| SAM-dependent methyltransferase [Desulfotomaculum reducens MI-1]
          Length = 418

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 42/198 (21%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD----SALAFSLPRIEKR--- 96
           R L+   +  I G   F                  + +VD        + L + E R   
Sbjct: 186 RKLEGLPL--ITG---FIGEPF--DPKVVIKENGIQFVVDLEGGQKTGYFLDQRENRMAL 238

Query: 97  ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                  R+LD    TG        +    + +G+DI+  ALE+A+ NA  NG  +R   
Sbjct: 239 QGLVKGSRVLDCFCHTGTFS-MYATKYGAKEVLGLDIAAPALEVARVNAQLNGYGDRCTF 297

Query: 153 LQSDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            + + F  +      E  FDV++ +PP                   R +++G I G   Y
Sbjct: 298 KECNSFDELRAMERAEEKFDVVILDPPAFTKS--------------RKAIEGAIRG---Y 340

Query: 207 RTIADGVSRHLNKDGLCS 224
           + I     + L   G   
Sbjct: 341 KEINLRGMKLLPPGGYLI 358


>gi|227510268|ref|ZP_03940317.1| ribosomal protein L11 methyltransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227189920|gb|EEI69987.1| ribosomal protein L11 methyltransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 320

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 35/149 (23%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   AL   L     R    I+D+GTG+G + +A  K     K    D+   A+E 
Sbjct: 163 PTTQLSLQALEMVL-----RGGESIIDVGTGSGVLSIA-AKLMGAKKITAYDVDDVAVES 216

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           AK N   N  +       +D    +    D++V+N                      ++ 
Sbjct: 217 AKKNMRLNPQATDIPVAVNDLLKGIHTQVDLVVAN---------------------ILA- 254

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       +      +L   G   +
Sbjct: 255 -------EIIVPLVPQAYENLKPGGHFLM 276


>gi|222053520|ref|YP_002535882.1| ribosomal protein L11 methyltransferase [Geobacter sp. FRC-32]
 gi|254783304|sp|B9LZ49|PRMA_GEOSF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221562809|gb|ACM18781.1| ribosomal protein L11 methyltransferase [Geobacter sp. FRC-32]
          Length = 314

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E   L + A     P       V +LD+GTG+G + +   K     +   +DI   A+ +
Sbjct: 160 EHIFLAEGAFKGVAPVA----PVTVLDVGTGSGVLSIGAAKLGAE-RITAIDIDADAVVV 214

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           A  N   N  S+  + L +     + G FD++++N
Sbjct: 215 AGENVALNECSDVVE-LSTTPLQELTGNFDLVLAN 248


>gi|50401195|sp|Q9SWR3|MMT1_WOLBI RecName: Full=Methionine S-methyltransferase; AltName:
           Full=AdoMet:Met S-methyltransferase
 gi|5733427|gb|AAD49573.1| methionine S-methyltransferase [Wollastonia biflora]
          Length = 1088

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 53/275 (19%)

Query: 6   DSHSFLCRVTGLSSHQVIVDPD----SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           ++  FL  +         +D D      L +   F + +  +   +        G+++  
Sbjct: 44  EARIFLAHLQKK------LDNDGASQRCL-ETYHFQIQDIYLDRNEG------TGYQNRK 90

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + +    F P   +    +          + +    + +LG G G + +A+ ++   
Sbjct: 91  KFTMMVIPSIFMPEDWSFTFYEGINRHPDSIFKDK---TVAELGCGNGWISIAIAEKWLP 147

Query: 122 FKGVGVDISCKALEIAKSNAVTNG---------------VSERFDTLQSDWFS---SVEG 163
            K  G+DI+ +A++I+  N   N                + +R +  +SD  S       
Sbjct: 148 LKVYGLDINPRAVKISWINLYLNAFDEDGQPVYDSESKTLLDRVEFYESDLLSYCRDNHI 207

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLSHYRTIAD 211
             + IV   P I +   D +   V +              +L G ++   GL       +
Sbjct: 208 ELERIVGCIPQILNPNPDAMSKLVTENASEEFLHSLSNYCALQGFVEDQFGLGLIARAVE 267

Query: 212 GVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKL 244
                +   G+    +G    Q V   R+FE R L
Sbjct: 268 EGIDVIKPMGIMIFNMGGRPGQGV-CKRLFERRGL 301


>gi|262369229|ref|ZP_06062557.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315297|gb|EEY96336.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 341

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 22/144 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    +I D G G G +   L K +P  +   +D+   AL   K    
Sbjct: 180 DVGTAVLLPHLSQVTSGKIADFGCGAGMISAYLAKLNPKNRIFALDVDAFALASTKMTFE 239

Query: 143 TNG-VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            N  + E+ +                IVSNPP+ + +  D    E               
Sbjct: 240 KNNLLPEQLEIKAVHGIEDAPLFLHAIVSNPPFHQGIHTDYNASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                  +     RHL  DG   +
Sbjct: 285 ------NLCKTSRRHLKSDGELWI 302


>gi|242373883|ref|ZP_04819457.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348437|gb|EES40039.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           M23864:W1]
          Length = 312

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 6/95 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + + 
Sbjct: 172 KPTDSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVNVAKENFKKNHCENAIEAVP 229

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +     +  F+++++N   I + I++ +  +  +
Sbjct: 230 GNLLQDEDKKFNIVIAN---ILAHIIEEMIEDAYN 261


>gi|116751314|ref|YP_848001.1| 50S ribosomal protein L11 methyltransferase [Syntrophobacter
           fumaroxidans MPOB]
 gi|166223498|sp|A0LQ64|PRMA_SYNFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116700378|gb|ABK19566.1| LSU ribosomal protein L11P methyltransferase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 290

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 2/97 (2%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           + ET  L    L     +        +LD+GTG+G + +A      F     VD   +A+
Sbjct: 132 QHETTRLCLEWLEDRALQALPSAPGSLLDVGTGSGILAVAAAL-LGFHPVQAVDDDPEAV 190

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           E+A  N   NG+    + L      +  G FDV+++N
Sbjct: 191 EVAAENIALNGMESAIELLAGTARQA-SGAFDVVIAN 226


>gi|325293441|ref|YP_004279305.1| ribosomal protein L11 methyltransferase [Agrobacterium sp. H13-3]
 gi|325061294|gb|ADY64985.1| putative ribosomal protein L11 methyltransferase [Agrobacterium sp.
           H13-3]
          Length = 292

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 43/174 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ K       +  DI   A+ +A+ N   NG
Sbjct: 140 LEMIEDVLRTRTVRNALDLGTGSGVLAIAVRKMR-HIPVLATDIDPIAVRVARENVRLNG 198

Query: 146 VSERFDT-----LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +             SD F    G FD+I++N                             
Sbjct: 199 IVSGLALETAPGFHSDAFRKY-GPFDLIIAN----------------------------- 228

Query: 201 DGLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                 R +     +   HL   G   +  I  +Q+  V+  +   +L  V   
Sbjct: 229 ---ILARPLIKMAPQLVTHLAPGGTVILSGILASQRWKVLAAYNGARLSHVRTI 279


>gi|253698879|ref|YP_003020068.1| ribosomal protein L11 methyltransferase [Geobacter sp. M21]
 gi|259534536|sp|C6DY35|PRMA_GEOSM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|251773729|gb|ACT16310.1| ribosomal protein L11 methyltransferase [Geobacter sp. M21]
          Length = 306

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 2/96 (2%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T++ +++           +    +LD+GTG+G + +A        + V VDI  +A+ 
Sbjct: 150 PTTKMCLEALERIGFYAHGGKLPSPVLDVGTGSGVLSIAAALLGAE-EIVAVDIDPEAVR 208

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           +   N   NG+++R     +     + G F V+V+N
Sbjct: 209 VTVENLELNGMADRVAPSTTSL-EQLPGGFQVVVAN 243


>gi|224476686|ref|YP_002634292.1| ribosomal protein L11 methyltransferase [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|254783313|sp|B9DNJ8|PRMA_STACT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|222421293|emb|CAL28107.1| putative ribosomal protein L11 methyltransferase (PrmA) family
           protein [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 312

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 72/222 (32%), Gaps = 60/222 (27%)

Query: 57  WRDFYNV-------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK-------------- 95
           W+++++         +  S +T++   ++EL ++     +    +               
Sbjct: 112 WKNYFHPFKASKNFTIVPSWETYQKESDSELCIELDPGMAFGTGDHPTTSMCLNAIEQYV 171

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A            VD+   A+ +AK N   N      +T   
Sbjct: 172 KPSDSVIDVGTGSGILSIAC-HLLGVRHIKAVDLDELAVRVAKENFEKNSCENAIETTTG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +        +DV+++N               +                     + +    
Sbjct: 231 NLLKGETNKYDVVIAN---------------ILAH--------------IIEEMIEDAYN 261

Query: 216 HLNKDGL-----CSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            LN++G        +E    +  +++   +     +++   D
Sbjct: 262 TLNEEGRFITSGIIIE----KSDEIIEHMKRVGFNIISINHD 299


>gi|323140978|ref|ZP_08075888.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium
           sp. YIT 12067]
 gi|322414515|gb|EFY05324.1| putative 23S rRNA m5C1962 methyltransferase [Phascolarctobacterium
           sp. YIT 12067]
          Length = 407

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-------GVSER 149
               +LD  T TG+  L   K         VDIS +A+++A+ NA  N       G+   
Sbjct: 231 KGKHVLDCFTHTGSFALNAAK-GGAASVTAVDISAEAVQMAEHNAAINNCSDVMHGLQAN 289

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              L SD F+     +D I+ +PP                   + ++ G       Y+ I
Sbjct: 290 VFDLLSDLFNKHSREYDFIILDPPAFTKSGSTV----------KNAIRG-------YKEI 332

Query: 210 ADGVSRHLNKDGLCS 224
                + L + G  +
Sbjct: 333 NLKAMKLLPRGGYLA 347


>gi|269103647|ref|ZP_06156344.1| ribosomal protein L11 methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163545|gb|EEZ42041.1| ribosomal protein L11 methyltransferase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 294

 Score = 63.2 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P PE   +L+D  LAF           L  ++ +D+    ++D G 
Sbjct: 109 FGRRLWICPSWREAPEPEAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LF 165
           G+G + +A   +    K +G+DI  +A+  ++ NA  NGV++  +          EG   
Sbjct: 169 GSGILAIA-ALKLGAAKVIGIDIDPQAILASRDNAERNGVADNLELYLPQ--DQPEGIQA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|330811857|ref|YP_004356319.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327379965|gb|AEA71315.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 379

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 32/173 (18%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 228 LPHLPKNLGTARVADLGCGNGVLAIASALQNPEAHYTLVDESYMAVQSAAENWRAALGER 287

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D  +  E    DV++ NPP+ +  +V                     G     
Sbjct: 288 EVTLRAGDGLAGQEAQSLDVVLCNPPFHQQQVV---------------------GDFLAW 326

Query: 208 TIADGVSRHLNKDGLCSV----EIGYNQKVD-----VVRIFESRKLFLVNAFK 251
            +       L   G   +     +GY+ K+      V ++  + K  ++ A K
Sbjct: 327 RMFQQAREALVVGGALYIVGNRHLGYHSKLARLFRGVEQVAATPKFVILKARK 379


>gi|311742905|ref|ZP_07716713.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromicrobium
           marinum DSM 15272]
 gi|311313585|gb|EFQ83494.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromicrobium
           marinum DSM 15272]
          Length = 409

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 27/177 (15%)

Query: 16  GLSSHQVIVDPDSVLDD---RQRFFLTNAIVRSLKHESIHRILGWRD------------- 59
           G     ++      L     +    L   + + L H   + I G R              
Sbjct: 92  GTDLADLLTPFAERLTHLVPKPLQRLRVFVDKKLPHHEKNSIEGSRSNIERHYDLSNEMF 151

Query: 60  --FYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCL 113
             F +  ++ SS  F      +  +++A    +   L +    +  R+L++GTG GA+ +
Sbjct: 152 ATFLDPTMSYSSAWFA--STDDEPLETAQLRKIDGILDQAHVGEGTRVLEIGTGWGALAI 209

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
              +         + IS +   +A+      G+++R D    D +  V+G FD IVS
Sbjct: 210 RAAQR--GAHVTTITISQEQAALAQQRIDAAGLTDRVDLRLQD-YREVQGQFDAIVS 263


>gi|293365946|ref|ZP_06612649.1| ribosomal protein L11 methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307702348|ref|ZP_07639306.1| ribosomal protein L11 methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|291315624|gb|EFE56074.1| ribosomal protein L11 methyltransferase [Streptococcus oralis ATCC
           35037]
 gi|307624151|gb|EFO03130.1| ribosomal protein L11 methyltransferase [Streptococcus oralis ATCC
           35037]
          Length = 316

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        K    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKKIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|170719976|ref|YP_001747664.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida W619]
 gi|229564336|sp|B1J2W7|RLMG_PSEPW RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|169757979|gb|ACA71295.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida W619]
          Length = 374

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 46/138 (33%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A    +P      VD S  A++ A+ N        
Sbjct: 223 LPHLPRDLGNARVADLGCGNGVLAIANALTNPQAHYTLVDESYMAVQSAQENWQAALGDR 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               L  D  + VE    DV++ NPP+ +  +V                     G     
Sbjct: 283 AVTVLAGDGLAGVEKQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|268317875|ref|YP_003291594.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252]
 gi|262335409|gb|ACY49206.1| ribosomal L11 methyltransferase [Rhodothermus marinus DSM 4252]
          Length = 285

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+LD GTGTG + +A LK       +  DI   A E A+ N   NGV++R +  Q 
Sbjct: 146 EPGARVLDAGTGTGILTIAALKLGAGS-AIAFDIDPWAAENAQENFARNGVADRVEFRQG 204

Query: 156 DWFSSVEGLFDVIVSN 171
                 E  FD+I++N
Sbjct: 205 SIEVVPERDFDLILAN 220


>gi|195381937|ref|XP_002049689.1| GJ21733 [Drosophila virilis]
 gi|194144486|gb|EDW60882.1| GJ21733 [Drosophila virilis]
          Length = 314

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 54/147 (36%), Gaps = 21/147 (14%)

Query: 59  DFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +++ + +  +  +  P    R    L ++  LA       K D V  +D+G G+  +   
Sbjct: 65  EYFGLHVEFAPGSLVPTLALRLNYILWLEDLLAPL-----KLDAVHGIDIGCGSSCIYSL 119

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------------E 162
           L  +   +  + ++     +E A+ N   N +    +       +++            +
Sbjct: 120 LAAKKNQWHMLALESKQTNIEYARENVKRNNLEHLVEVYAQPDKNNIFKSYFETASRLPK 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             F   + NPP+ +S   +  G   R+
Sbjct: 180 EGFHFCLCNPPFFDSNAENPFGGNTRN 206


>gi|21244404|ref|NP_643986.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|21110065|gb|AAM38522.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 355

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 60/200 (30%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N   N    +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDLYEAEARALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLMLVANRHLPYEQVLNDS 329

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L+ A +
Sbjct: 330 FGQVRVAAERDGFKLIAAIR 349


>gi|325262190|ref|ZP_08128928.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. D5]
 gi|324033644|gb|EGB94921.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. D5]
          Length = 471

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     +   ++    F+P      ++          I     + + DL +GT
Sbjct: 265 LYGKDYFYERILGMEFKITPFSFFQPNSRGAEVL---YETVREYIGDIQDMTVFDLFSGT 321

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P   + +GV+I  +A+E A+ NA  NG+      +  D F     +E  
Sbjct: 322 GTIGQVLA---PVAKQVIGVEIVEEAVEAARENAARNGLG-NCRFIAGDVFKVLDEIEEK 377

Query: 165 FDVIVSNPP 173
            DVIV +PP
Sbjct: 378 PDVIVLDPP 386


>gi|39936576|ref|NP_948852.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris CGA009]
 gi|39650432|emb|CAE28955.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 311

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +      R+LDLGTGTG + +A  K       +  DI  +++ +A+ NA  NGV      
Sbjct: 165 LRAGPPQRVLDLGTGTGVLAIAAAKALRH-TVLATDIDKQSVAVARENARLNGVGNLVQA 223

Query: 153 LQSDWFS----SVEGLFDVIVSN 171
             +  F+    +    FD++++N
Sbjct: 224 EWATGFASPVFAAHAPFDLVLAN 246


>gi|329114155|ref|ZP_08242917.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter pomorum
           DM001]
 gi|326696231|gb|EGE47910.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acetobacter pomorum
           DM001]
          Length = 403

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 28/168 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPR--IEKRDVVRILDLGTGTGAVCLALLK 117
           F +     S   F    ET     +A    +    +  R  + +LD+G G G + L L K
Sbjct: 136 FLDKDWQYSCAYFRHGTETLDEAQAAKKHHIAAKLLLDRPDLEVLDIGCGWGGMALTLAK 195

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +       G+ +S + L  A+  A   G+  R      D + ++   FD IVS       
Sbjct: 196 DY-GAIVTGITLSQEQLAFARQRAKDEGLEGRVRFELLD-YRNLHRRFDRIVS------- 246

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    V  F+          G+ HYR   D +   L  DG+  V
Sbjct: 247 ---------VGMFE--------HVGVGHYRQFFDVIKNALVDDGVALV 277


>gi|330501770|ref|YP_004378639.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
 gi|328916056|gb|AEB56887.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
          Length = 374

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +  D  R+ DLG G G + +A    SP  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRHLDARRVADLGCGNGVLGIAYALGSPQAQLTLVDESYMAVQSAQENWRAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          D+++ NPP+ +  +V                     G     
Sbjct: 283 PVTIRAGDGLAEQPADSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFQQARSALVTGGELWI-VGNRHLGYHAKLARLFR 356


>gi|85716939|ref|ZP_01047903.1| N5-glutamine methyltransferase, HemK family protein [Nitrobacter
           sp. Nb-311A]
 gi|85696218|gb|EAQ34112.1| N5-glutamine methyltransferase, HemK family protein [Nitrobacter
           sp. Nb-311A]
          Length = 172

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 14/160 (8%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++    + + ++GTG+G + L+        K V +DI+  A+  A +NA  N +S   + 
Sbjct: 7   VKASAALTVGEIGTGSGILALSAACAGA-SKVVALDINPAAVAAAATNATQNQMSHIVEA 65

Query: 153 LQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             SD  S+VE    FDVI+S+PP       D +           +   G DG  H   + 
Sbjct: 66  RLSDLLSAVEIDECFDVIISSPPSFAGEPKDMIDR---------AWHAG-DGYRHLEGLF 115

Query: 211 DGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNA 249
                HL   G   + +  +  V +      +        
Sbjct: 116 GQSYSHLKSRGEMLILLSSDTNVALFKEWATNVGFSWQQV 155


>gi|330718871|ref|ZP_08313471.1| O-methyltransferase [Leuconostoc fallax KCTC 3537]
          Length = 254

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 19/184 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV--GVDISCKALEIAKSN 140
           D+ L     + + +     +DLG+GTGAV L     +P   G+   V+I  +  E+++ +
Sbjct: 34  DAILLAYFAQPKGKGRGITVDLGSGTGAVGL---LYAPKITGIVKLVEIQPELAEMSQRS 90

Query: 141 AVTNGVSERFDTLQSD---WFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            VTN + ER   +  D    F  ++ G  + ++SNPPY          ++ R ++    L
Sbjct: 91  IVTNHLQERVSVVNRDMNTIFDDIKPGSVETVLSNPPYFPLNATTKTNID-RHYE----L 145

Query: 197 DGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY-- 253
                 L+     +A   ++ L  +G   +     +  D+   F  RKL +      Y  
Sbjct: 146 ARHE--LTIDLPKLAQIANKLLKNNGKFYMVHRPERLTDIFAAFAERKLMIKRVQFVYGK 203

Query: 254 GGND 257
            G +
Sbjct: 204 AGRE 207


>gi|121586204|ref|ZP_01675995.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121549616|gb|EAX59640.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
          Length = 416

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 67/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           Y + LT   + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 238 YAITLTNLPNVY-----SGESLDLGSRFILEHLPADPTLEDFIDLGCGNGVLSVRLGQLN 292

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A+  A+ N   N        + ++           +IV NP + +  
Sbjct: 293 PQAKITCVDESFMAIASAQKNLHDNLGKRDIHCIANNCLDGFPAHSSSMIVCNPLFHQQQ 352

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 353 TITD----------HIAW-----------QMFCDSKHVLKKGGKLWVIGNRHLGYD--VK 389

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 390 LARLF---GKSHVRVI---ANNSKFVILQ 412


>gi|77460933|ref|YP_350440.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas fluorescens
           Pf0-1]
 gi|123603324|sp|Q3K705|RSMC_PSEPF RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|77384936|gb|ABA76449.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas fluorescens
           Pf0-1]
          Length = 332

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++K     +LD G G G +  A+ +  P  +   +D+   A   ++    
Sbjct: 177 DRGSALLLEHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNQVTLLDVDAFAAASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + L  D   +     + I+SNPP+   V  D    E                
Sbjct: 237 ANGLEA--EVLTGDGIDAAPMGLNAILSNPPFHVGVHTDYFATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    ++HL   G  
Sbjct: 279 -----NLLRKAAKHLKNGGEL 294


>gi|212637183|ref|YP_002313708.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
 gi|226712999|sp|B8CUC9|RSMC_SHEPW RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|212558667|gb|ACJ31121.1| rRNA (guanine-N(2)-)-methyltransferase [Shewanella piezotolerans
           WP3]
          Length = 342

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +    +LD G G G +  ALL   P      VDI+  AL         NG+S       
Sbjct: 199 PKMQGNVLDFGCGAGVIAAALLTAQPKLTLDCVDINAMALTSCDLTMQANGLSANIFA-- 256

Query: 155 SDWFSSVEGLFDVIVSNPPYIE 176
           SD  +   G +D I+SNPP+ +
Sbjct: 257 SDGMAQTSGHYDGIISNPPFHD 278


>gi|291549934|emb|CBL26196.1| 23S rRNA m(5)U-1939 methyltransferase [Ruminococcus torques L2-14]
          Length = 456

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 17/131 (12%)

Query: 53  RILGWRDFY-----NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           RIL  +DF+      +   ++    F+P  +   ++          I   D   + DL +
Sbjct: 263 RILYGQDFFYEKLLGLEFKITPFSFFQPNSKGAEVL---YETVREYIGDIDNQVVFDLFS 319

Query: 107 GTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVE 162
           GTG +   L    P  K  +GV+I  +A+E AK NAV NG+      +  D F     +E
Sbjct: 320 GTGTIGQVLA---PVAKKVIGVEIIEEAVEAAKENAVRNGLY-NCKFIAGDVFKVLDEIE 375

Query: 163 GLFDVIVSNPP 173
              DVIV +PP
Sbjct: 376 EKPDVIVLDPP 386


>gi|323343167|ref|ZP_08083398.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC
           19414]
 gi|322463231|gb|EFY08426.1| methyltransferase domain protein [Erysipelothrix rhusiopathiae ATCC
           19414]
          Length = 194

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 30/159 (18%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +++    ++ DLG G G V + L       +  GVD++ +++E+A  N     V+   + 
Sbjct: 53  VDQPLKGKVADLGCGIGVVGVILSHFFSDLEMTGVDVNPRSVELANINYEKYNVNG-INK 111

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +Q      ++G++D ++SNPP                                   + D 
Sbjct: 112 IQ----DGLDGMYDFVISNPPIRVGKEKMYS-------------------------LFDN 142

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               LNKDG+    I  +      +             K
Sbjct: 143 AYDVLNKDGMFIFVIRKSHGAKSAQAKCEALFGNCELLK 181


>gi|316933204|ref|YP_004108186.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
 gi|315600918|gb|ADU43453.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris DX-1]
          Length = 327

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +      R+LDLGTGTG + +A  K       +  DI  +++ +A+ NA  NGV      
Sbjct: 181 LRAGPPQRVLDLGTGTGVLAIAAAKALRH-TVLATDIDKQSVAVARENARLNGVGNLVQA 239

Query: 153 LQSDWFS----SVEGLFDVIVSN 171
             +  F+    +    FD++++N
Sbjct: 240 EWATGFASPVFAAHAPFDLVLAN 262


>gi|58038778|ref|YP_190742.1| cyclopropane-fatty-acyl-phospholipid synthase [Gluconobacter
           oxydans 621H]
 gi|58001192|gb|AAW60086.1| Cyclopropane-fatty-acyl-phospholipid synthase [Gluconobacter
           oxydans 621H]
          Length = 406

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+G G G + L L K+    K +G+ +S + LE+A+  A   G+  +      
Sbjct: 173 RPGFEVLDIGCGWGGMALTLAKDY-GAKVLGITLSREQLEVARKRAKEEGLEGQVRFELI 231

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D + ++   FD IVS                V  F+      G       +      +  
Sbjct: 232 D-YRNLHQQFDRIVS----------------VGMFE----HVGPPQ----FEAFFKQLKA 266

Query: 216 HLNKDGLCSV 225
            L  DG+  +
Sbjct: 267 CLKPDGVALI 276


>gi|126731920|ref|ZP_01747724.1| putative methyltransferase [Sagittula stellata E-37]
 gi|126707747|gb|EBA06809.1| putative methyltransferase [Sagittula stellata E-37]
          Length = 211

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 63/182 (34%), Gaps = 48/182 (26%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I  R   R +DLG G G   + L +    +K V VD+S  AL+  + NA T GV+ER   
Sbjct: 38  IAGRPAGRAVDLGCGRGDDAIWLARN--GWKVVAVDVSQAALDTVRRNAETAGVAERVTW 95

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-TIA 210
           L+ D   S+ +G FD+++S   +                            L   R  + 
Sbjct: 96  LRHDLSKSLPDGPFDLVLSMFTHTP--------------------------LEFDRAAML 129

Query: 211 DGVSRHLNKDGLCSV--------------EIGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
              +  +   GL  +              EI + +  DV          ++        +
Sbjct: 130 RAAATLVAPGGLLLIAGHGSLAPWAWSDPEIQFPKAQDVADALALFDWNMIEI----ADH 185

Query: 257 DR 258
            R
Sbjct: 186 PR 187


>gi|83719303|ref|YP_441708.1| ribosomal protein L11 methyltransferase [Burkholderia thailandensis
           E264]
 gi|167580522|ref|ZP_02373396.1| ribosomal protein L11 methyltransferase [Burkholderia thailandensis
           TXDOH]
 gi|123537576|sp|Q2SZE1|PRMA_BURTA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|83653128|gb|ABC37191.1| ribosomal protein L11 methyltransferase [Burkholderia thailandensis
           E264]
          Length = 300

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGNVTGIDIDPQAVEAARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D           G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPAGEFDIVVAN 234


>gi|302663171|ref|XP_003023231.1| hypothetical protein TRV_02635 [Trichophyton verrucosum HKI 0517]
 gi|291187218|gb|EFE42613.1| hypothetical protein TRV_02635 [Trichophyton verrucosum HKI 0517]
          Length = 283

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         ++++GTG+G +   L        G      +G D++ KA    +     
Sbjct: 54  LPTSTTSPSPVVVEVGTGSGVILGFLAANCKAILGRSDILTIGTDVNRKACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
                                NA     ++    +  D  S +  G+ D+++ NPPY+ +
Sbjct: 114 AMSDNYSVENFRATPANKEGTNAKVPKPAQPLAVITGDLCSPLRAGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGLEVR---------DFDPR-----ISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +  L   +           F+       ++  GG  G+     + D +   LN + G+
Sbjct: 174 PELPHLPSSLEATSSASGMSKFEIESYFLSLTYAGGEHGMEITDRLLDSIPHVLNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|313893338|ref|ZP_07826912.1| methyltransferase small domain protein [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442107|gb|EFR60525.1| methyltransferase small domain protein [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 241

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 21/194 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   SD F    +   L+      S            +D GTGTG + L +      
Sbjct: 14  GLQIYQRSDMFRFSFDAIALIHFCRFNSRHTY--------VDFGTGTGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGL-FDVIVSNPPYIE 176
               G+DI+   +E+A+ +   NG  +    L  D+    +  ++   FD ++ NPP+ +
Sbjct: 65  GHITGIDINETLIELAQRSVEHNGKQDVVKMLGGDYRHMSYRDIQDKPFDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E    +  ++L  G   L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSE----ERALALHDGHTTLD---EVLKAVQSFIKCKGRLWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAF 250
              E          
Sbjct: 178 HKLEVANFQAKRIR 191


>gi|312127719|ref|YP_003992593.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777738|gb|ADQ07224.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 389

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  NGV  + + + ++ F  
Sbjct: 218 VLDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNGVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|290968895|ref|ZP_06560432.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781191|gb|EFD93782.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 406

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 25/134 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LD  T TGA  L   K         +D+S +A+ +A+ N+  NG++      Q++ 
Sbjct: 231 GKHVLDCFTHTGAFALNAAKGGAAA-VTAIDVSAEAVAMAEENSRRNGLASVVTVQQANV 289

Query: 158 FS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F        +    +D I+ +PP         +G  VR                 Y+ I 
Sbjct: 290 FELLTQLAAAKCNKYDFIILDPPAFTKSGK-TVGRAVRG----------------YKEIN 332

Query: 211 DGVSRHLNKDGLCS 224
               R L + G  +
Sbjct: 333 MKAMRVLPRGGYLA 346


>gi|227824077|ref|YP_002828050.1| methyltransferase small [Sinorhizobium fredii NGR234]
 gi|227343079|gb|ACP27297.1| methyltransferase small [Sinorhizobium fredii NGR234]
          Length = 338

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           VD+       R+ K       D G G G + + L + SP  K     +   +ALE A+ N
Sbjct: 179 VDAGSELLASRLPKDFTGHAADFGAGWGYLSVMLAQASPGLKGIDLFEADHEALEAARRN 238

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N  +        D         +D+IV NPP+           E    +P I    G
Sbjct: 239 VKANAPTTPARFYWHDLTSEETRDKYDLIVMNPPF----------HEGHAAEPAI----G 284

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    I     + L + G   +
Sbjct: 285 S-------AIIKAALKALKQGGRLML 303


>gi|166366711|ref|YP_001658984.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843]
 gi|166089084|dbj|BAG03792.1| phycocyanin operon protein W [Microcystis aeruginosa NIES-843]
          Length = 396

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  +R+ +RILD G GTGA    LL  +PF   V +DIS KALEIAK     
Sbjct: 41  AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFAHVVAIDISEKALEIAKERCNR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVS 170
           +GV+ +      F  L  +  +++ G FD+I  
Sbjct: 101 SGVATKHRGSLDFHHLPLESATNLPGEFDLINC 133


>gi|156030961|ref|XP_001584806.1| hypothetical protein SS1G_14261 [Sclerotinia sclerotiorum 1980]
 gi|154700652|gb|EDO00391.1| hypothetical protein SS1G_14261 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 261

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 39/189 (20%)

Query: 70  DTFEPRPETELLV--------DSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKE 118
             +EP  ++ LL+        +  L    P+  +        ++++GTG+G V   +   
Sbjct: 14  RIYEPAEDSFLLLDTLSSTSEEEFLQQRFPQNGQSSISPSPFVVEIGTGSGVVLSFVHAH 73

Query: 119 SP-------------FFKGVGVDISCKALEIAKS--NAVTNGVSERFDTLQSDWFSSVE- 162
           +                     + + + +++A+   N+           +  +  + ++ 
Sbjct: 74  AKIIFGRADILTAGVDVNRYACEATQETVKVAEKEQNSQALSHGSYLGNVVGNLGTCLKP 133

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDP----------RISL--DGGIDGLSHYRTIA 210
           G+ DV++ NPPY+ S  V    L     +            ++L   GG+DG+     + 
Sbjct: 134 GMVDVLIFNPPYVPSPDVPIPELSGAGNEDGTLTYEGDSKLLALSYAGGVDGMEITDRLI 193

Query: 211 DGVSRHLNK 219
           D +   LNK
Sbjct: 194 DALPEVLNK 202


>gi|114319479|ref|YP_741162.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114225873|gb|ABI55672.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 416

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LD+G+G G + L+L + +P     GV +S + L +A++ A   G+ +R      
Sbjct: 168 EPGQEVLDIGSGWGGMGLSLARYAP-VNVTGVTLSTEQLRVARARAQEAGLDDRVAFELQ 226

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D +   +G +D IVS                V  F+          G++HYR     + R
Sbjct: 227 D-YRERQGPYDRIVS----------------VGMFE--------HVGVTHYREFFGHLRR 261

Query: 216 HLNKDGLCSV 225
            L  DG+  +
Sbjct: 262 LLKPDGIALI 271


>gi|26991332|ref|NP_746757.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida KT2440]
 gi|81439697|sp|Q88E20|RLMG_PSEPK RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|24986393|gb|AAN70221.1|AE016661_7 nucleotide methyltransferase, putative [Pseudomonas putida KT2440]
          Length = 374

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A    +P  +   VD S  A++ A+ N +      
Sbjct: 223 LPHLPRNLGRARVADLGCGNGVLAIASALANPEAEYTLVDESYMAVQSAQENWLAALGER 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
               L +D  + +E    DV++ NPP+ +  +V                     G     
Sbjct: 283 PATFLAADGLAGLEKQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|315222478|ref|ZP_07864376.1| ribosomal protein L11 methyltransferase [Streptococcus anginosus
           F0211]
 gi|315188446|gb|EFU22163.1| ribosomal protein L11 methyltransferase [Streptococcus anginosus
           F0211]
          Length = 317

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N  +E       
Sbjct: 170 RSGEIVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIALNAGTENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + D   R
Sbjct: 229 DLLKDVAIEADVIVAN---------------------ILA--------DILVNLTDDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            L  +G   +   I       V    E+   FL
Sbjct: 260 LLKDEGYLIMSGIISEKW-NLVRESAEAAGFFL 291


>gi|313127040|ref|YP_004037310.1| methyltransferase [Halogeometricum borinquense DSM 11551]
 gi|312293405|gb|ADQ67865.1| methyltransferase [Halogeometricum borinquense DSM 11551]
          Length = 342

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 13/121 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L ++   F PR         A        +  +  R+ D+  G G   + + K     + 
Sbjct: 165 LDIAEVYFSPR--------LATERHRVVQQVTEGERVFDMFAGVGPFVIPMAKR--GAEV 214

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVD 181
           VG D++  A+E  + NA  NGV ER    Q    D     EG  + IV N P+     +D
Sbjct: 215 VGCDLNAAAVEYLRENARRNGVEERVTARQGDVRDVADDYEGWANRIVMNLPHSADDFLD 274

Query: 182 C 182
            
Sbjct: 275 T 275


>gi|229819136|ref|YP_002880662.1| methyltransferase small [Beutenbergia cavernae DSM 12333]
 gi|229565049|gb|ACQ78900.1| methyltransferase small [Beutenbergia cavernae DSM 12333]
          Length = 508

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 65/179 (36%), Gaps = 19/179 (10%)

Query: 74  PRPETELLVDSALAFSLPRIEKRD-VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P P   +L     + +L ++   D   R+LDLGTG G   L   + +     V  D+S +
Sbjct: 139 PLPADYVLGVGGASTTLAQVTVPDRRERVLDLGTGCGIQALHATRHAGG--VVATDVSAR 196

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AL  A             D  +      V G  FD++VSNPP++ +     +       +
Sbjct: 197 ALAYAA--FNAALAGAELDLREGSMLEPVAGERFDLVVSNPPFVITPRTAGV-------E 247

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EI--GYNQKVDVVRIFESRKL 244
                DGG  G    R +  GV   L   G+  +    E   G   +  V        L
Sbjct: 248 EYTYRDGGRSGDDVVRDLVTGVGAVLAPGGIAQLLGNWEHRRGEPWQERVEAWLVESGL 306


>gi|39949332|ref|XP_363184.1| hypothetical protein MGG_08768 [Magnaporthe oryzae 70-15]
 gi|145009314|gb|EDJ94025.1| hypothetical protein MGG_08768 [Magnaporthe oryzae 70-15]
          Length = 273

 Score = 63.2 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 14/130 (10%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F LP ++  D  +ILD+G G G + +     +   + VG+DIS   L  A+  A   G  
Sbjct: 33  FLLPHLKPTD--KILDVGCGPGTITIGFAAIAHDGEVVGIDISEDILGQARQVAAKAGSP 90

Query: 148 ERFDTLQSDWFSSV----EGLFDVIVSNP--PYIESVIVDCLGLEVRDFDPRISLDGGID 201
                   D    +    +G FD + ++   P++ +  +     E    + R  L    D
Sbjct: 91  SNLSFRHGDVLKGLDWIPDGTFDAVYASQVFPHLPTAEM----REQALSEMRRVL--KKD 144

Query: 202 GLSHYRTIAD 211
           G+   RT+AD
Sbjct: 145 GILATRTLAD 154


>gi|326793790|ref|YP_004311610.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas
           mediterranea MMB-1]
 gi|326544554|gb|ADZ89774.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas
           mediterranea MMB-1]
          Length = 416

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 58/153 (37%), Gaps = 24/153 (15%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++E +    +L++GTG G + +   +     K     IS +  + A+      G
Sbjct: 182 LDRICQKLELKPDDHLLEIGTGWGGMAIHAAQHY-GCKVTTTTISKEQYDYAREKVEALG 240

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGL 203
           + +R   L  D +  + G +D +VS        +++ +G E  D  F+   SL     GL
Sbjct: 241 LCDRVTLLLED-YRDLTGTYDKLVS------IEMIEAVGHEYYDSYFEKCSSLIKDA-GL 292

Query: 204 SHYRTI-------------ADGVSRHLNKDGLC 223
              + I              D + R++   G  
Sbjct: 293 MVIQAITIADQRYDFARNSVDFIQRYIFPGGCL 325


>gi|326471799|gb|EGD95808.1| hypothetical protein TESG_03273 [Trichophyton tonsurans CBS 112818]
          Length = 430

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 50/154 (32%), Gaps = 17/154 (11%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL--------LVDSALAFSLPRIEKRDVVRILDLGTGT 108
            RDF  + + L  D   P     L        L+D               V  LD+GTG+
Sbjct: 51  RRDF-GLEVELPDDRLCPPVPNRLNYILWLQDLIDCTGDDYHEGFNADRDVVGLDIGTGS 109

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L        +  V  DI  K L+ A+ N   N +      + S     +      
Sbjct: 110 SCIYPLLGAVHRKRWTFVATDIDKKNLQYARQNVQRNNLQSCIQVVDSVPDGPLIPLDRI 169

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
              + D  + NPP+ ES        E +  +P  
Sbjct: 170 QLKMLDFTMCNPPFYESHEEMKQLAEEKQNEPLS 203


>gi|317501056|ref|ZP_07959262.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 8_1_57FAA]
 gi|316897443|gb|EFV19508.1| 23S rRNA (Uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 8_1_57FAA]
          Length = 460

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  ++  +F  +P T+   +         I     + + DL +GTG
Sbjct: 268 LYGQDFFYEKLLGLQFKITPFSF-FQPNTK-GAEVLYETVREYIGDIHDLTVFDLFSGTG 325

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLF 165
            +   L    P  K  +GV+I  +A+E AK NA  NG+S   + +  D F     ++   
Sbjct: 326 TISQVLA---PVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFEVLDDIKEKP 381

Query: 166 DVIVSNPP 173
           DVI+ +PP
Sbjct: 382 DVIILDPP 389


>gi|257452347|ref|ZP_05617646.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium sp.
           3_1_5R]
 gi|317058890|ref|ZP_07923375.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684566|gb|EFS21401.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 221

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 21/169 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-S 119
           +        + F    +  LL +    F+ P+ +       L++GTG G + + L ++  
Sbjct: 11  HGASFYQEKEGFRFGNDIVLLAEFITEFAKPQQKN------LEIGTGNGILPILLSQQGF 64

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              +   VDI    + +A+ NA  NG+  +F       FS  +  +  I +NPPY++   
Sbjct: 65  LSKEYCAVDILESNIVLAQKNAEKNGIYAQFLCQDIRSFSE-KNSYRQIFANPPYMKQDG 123

Query: 180 V---DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               D     +   +  +SL                V + L   G   +
Sbjct: 124 KLQNDNKKKAIARHEICLSL----------EEFILSVKKILAPIGALYM 162


>gi|312959032|ref|ZP_07773551.1| rRNA (guanine-N2-)-methyltransferase [Pseudomonas fluorescens WH6]
 gi|311286802|gb|EFQ65364.1| rRNA (guanine-N2-)-methyltransferase [Pseudomonas fluorescens WH6]
          Length = 332

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++K     +LD G G G +  A+ +  P      +D+   A   ++    
Sbjct: 177 DRGTELLLAHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNSVTLLDVDAFAAASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    D L  D   +     + I+SNPP+   V  D    E                
Sbjct: 237 ANGLEA--DVLTGDGIDAAPMGLNAILSNPPFHVGVHTDYFATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    ++HL K G  
Sbjct: 279 -----NLLRKAAKHLAKGGEL 294


>gi|296124262|ref|YP_003632040.1| hypothetical protein Plim_4030 [Planctomyces limnophilus DSM 3776]
 gi|296016602|gb|ADG69841.1| protein of unknown function Met10 [Planctomyces limnophilus DSM
           3776]
          Length = 552

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 26/131 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL   +G   L+           GVD+   A+ +AK NA  N V  + +   +D F+
Sbjct: 352 RVLDLCCYSGGFALSAAVSGAKS-VHGVDLDEAAIAVAKKNAKLNKV--QIEWAHADIFA 408

Query: 160 SVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +         +D++V +PP         L     D++         DG   Y  +    
Sbjct: 409 WMREAQKQGQQWDIVVLDPP--------KLIRTRDDYE---------DGRKKYFDMNRLA 451

Query: 214 SRHLNKDGLCS 224
           +  ++  G+  
Sbjct: 452 ASLVSPGGMLI 462


>gi|323353567|ref|ZP_08088100.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           VMC66]
 gi|322121513|gb|EFX93276.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           VMC66]
          Length = 318

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    VE   DVIV+N                      ++             + +   
Sbjct: 229 GNLLRGVEIEADVIVAN---------------------ILA--------DILVHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|326772535|ref|ZP_08231819.1| transferase [Actinomyces viscosus C505]
 gi|326637167|gb|EGE38069.1| transferase [Actinomyces viscosus C505]
          Length = 559

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 62/182 (34%), Gaps = 45/182 (24%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L V  A         +  V   LDLG G G   L LL+ +     V  DIS +AL 
Sbjct: 161 PDHVLGVGGAGLTLAGLTPRTRVGTALDLGCGCGIQTLYLLRHAE--HVVATDISARALA 218

Query: 136 IAKSNAVTNGVSE---------------------------RFDTLQSDWFSSVEG-LFDV 167
               NA   GVS                            R + L+      V G  FD+
Sbjct: 219 FTAFNAALAGVSVTGAPGAAPGADAASESDVEPGPASDPGRLELLRGSLLEPVAGRRFDL 278

Query: 168 IVSNPPYI---ESVIVDCLGL-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           I SNPP++    +V    L L E RD        GG         +  G++ HL      
Sbjct: 279 IASNPPFVLTPPAVREAGLPLMEYRD-------AGGP----ILPGLVAGLAEHLEPGATA 327

Query: 224 SV 225
            +
Sbjct: 328 VM 329


>gi|194709257|pdb|3DMF|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adomet
 gi|194709258|pdb|3DMG|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adohcy
 gi|194709259|pdb|3DMH|A Chain A, T. Thermophilus 16s Rrna N2 G1207 Methyltransferase (Rsmc)
           In Complex With Adomet And Guanosine
          Length = 381

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 32/177 (18%)

Query: 52  HRILG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            RILG    F+++    S+   +P     LL+  AL   L   E     ++LDLG G GA
Sbjct: 191 ARILGAEYTFHHLPGVFSAGKVDPAS---LLLLEALQERL-GPEGVRGRQVLDLGAGYGA 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + L L +     + VGV+    ++   +     N +  +   L SD   ++  E  FD+I
Sbjct: 247 LTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQ--ALHSDVDEALTEEARFDII 302

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+NPP+                       GG   L   +   +  +  L   G+  +
Sbjct: 303 VTNPPFH---------------------VGGAVILDVAQAFVNVAAARLRPGGVFFL 338


>gi|223940168|ref|ZP_03632030.1| ribosomal L11 methyltransferase [bacterium Ellin514]
 gi|223891185|gb|EEF57684.1| ribosomal L11 methyltransferase [bacterium Ellin514]
          Length = 300

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +   + +     LD+GTG+G + ++   +  +   V +D   +A+ +A+ NA+ NG
Sbjct: 148 LHEIVRSRKSQQAQSFLDIGTGSGILSIS-AVKLGYKPVVALDFDPEAVRVARENALLNG 206

Query: 146 VSERFDTLQSDWFS-SVEGL--FDVIVSN 171
           V  +    + D     + G   FD+I +N
Sbjct: 207 VDRQLRITRKDVTKLPLTGREKFDLICAN 235


>gi|55980502|ref|YP_143799.1| ribosomal RNA small subunit methyltransferase [Thermus thermophilus
           HB8]
 gi|262118483|pdb|2ZUL|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
           Methyltransferase Rsmc (Ttha0533) In Complex With
           Cofactor S-Adenosyl-L-Methionine
 gi|281500681|pdb|2ZWV|A Chain A, Crystal Structure Of Thermus Thermophilus 16s Rrna
           Methyltransferase Rsmc (Ttha0533)
 gi|55771915|dbj|BAD70356.1| probable ribosomal RNA small subunit methyltransferase [Thermus
           thermophilus HB8]
          Length = 375

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 32/177 (18%)

Query: 52  HRILG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            RILG    F+++    S+   +P     LL+  AL   L   E     ++LDLG G GA
Sbjct: 191 ARILGAEYTFHHLPGVFSAGKVDPAS---LLLLEALQERL-GPEGVRGRQVLDLGAGYGA 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + L L +     + VGV+    ++   +     N +  +   L SD   ++  E  FD+I
Sbjct: 247 LTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQ--ALHSDVDEALTEEARFDII 302

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+NPP+                       GG   L   +   +  +  L   G+  +
Sbjct: 303 VTNPPFH---------------------VGGAVILDVAQAFVNVAAARLRPGGVFFL 338


>gi|330881583|gb|EGH15732.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 296

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++    
Sbjct: 141 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 200

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 201 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 242

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 243 -----NLLRKARQHLKSGGEL 258


>gi|270293093|ref|ZP_06199304.1| ribosomal protein L11 methyltransferase [Streptococcus sp. M143]
 gi|270279072|gb|EFA24918.1| ribosomal protein L11 methyltransferase [Streptococcus sp. M143]
          Length = 316

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        K    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKKIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|192292397|ref|YP_001993002.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
 gi|192286146|gb|ACF02527.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris TIE-1]
          Length = 296

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +      R+LDLGTGTG + +A  K       +  DI  +++ +A+ NA  NGV      
Sbjct: 150 LRAGPPQRVLDLGTGTGVLAIAAAKALRH-TVLATDIDKQSVAVARENARLNGVGNLVQA 208

Query: 153 LQSDWFS----SVEGLFDVIVSN 171
             +  F+    +    FD++++N
Sbjct: 209 EWATGFASPVFAAHAPFDLVLAN 231


>gi|222152423|ref|YP_002561598.1| ribosomal protein L11 methyltransferase [Streptococcus uberis
           0140J]
 gi|254783317|sp|B9DTA9|PRMA_STRU0 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|222113234|emb|CAR40734.1| ribosomal protein L11 methyltransferase [Streptococcus uberis
           0140J]
          Length = 317

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDLNANTENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVTIQADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +   I       V    E    FL
Sbjct: 260 LVKDEGYLIMSGIISEKW-PMVRASAEKAGFFL 291


>gi|126179788|ref|YP_001047753.1| methyltransferase small [Methanoculleus marisnigri JR1]
 gi|125862582|gb|ABN57771.1| methyltransferase [Methanoculleus marisnigri JR1]
          Length = 203

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 5/106 (4%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L          +   + DLG GTG +              G+DI   A+ +A+ NA
Sbjct: 32  VAARLLHHAAMQGAIEGRAVCDLGCGTGILACGAALLGASA-VTGIDIDPAAIAVARRNA 90

Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
              GV+  F   D    D         D +V NPP+          
Sbjct: 91  ELLGVTVEFQVADVRDPDLDREALA-CDTVVMNPPFGAQKAHADRP 135


>gi|116516647|ref|YP_817026.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           D39]
 gi|148994978|ref|ZP_01823956.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP9-BS68]
 gi|161410740|ref|NP_359200.2| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           R6]
 gi|168488514|ref|ZP_02712713.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP195]
 gi|38605299|sp|Q8DNP4|PRMA_STRR6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|122278128|sp|Q04J12|PRMA_STRP2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116077223|gb|ABJ54943.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           D39]
 gi|147926915|gb|EDK77962.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP9-BS68]
 gi|183572631|gb|EDT93159.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP195]
 gi|332072602|gb|EGI83085.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA17570]
          Length = 316

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|260596264|ref|YP_003208835.1| ribosomal RNA large subunit methyltransferase G [Cronobacter
           turicensis z3032]
 gi|260215441|emb|CBA27526.1| Ribosomal RNA large subunit methyltransferase G [Cronobacter
           turicensis z3032]
          Length = 376

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 58/159 (36%), Gaps = 25/159 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     ++DLG G G + L LL ++P  +   VD S  A+  ++ N  
Sbjct: 212 DIGARFFMQHLPEAVEGEMVDLGCGNGVIGLTLLAQNPQARVRFVDESYMAVASSRLNVE 271

Query: 143 TN--GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     +R +   ++  + VE   F  ++ NPP+ +   +             I+    
Sbjct: 272 TNLPDALDRCEFQVNNALTGVEPESFHAVLCNPPFHQQHAITD----------HIAW--- 318

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238
                    +     R L   G   + +G        ++
Sbjct: 319 --------QMFQDARRCLKWGGELRI-VGNRHLDYFRKL 348


>gi|257899572|ref|ZP_05679225.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           Com15]
 gi|257837484|gb|EEV62558.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           Com15]
          Length = 315

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          D+   A+  AK N   N +++      +
Sbjct: 174 RGGETLLDVGTGSGVLSIA-AKYLGAKDVYAFDLDEVAVRSAKENMDMNEIAKDVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +E   DVIV+N                      ++             +     R
Sbjct: 233 DLLKGIEIESDVIVAN---------------------ILA--------DIILLMIPDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L + G   V  I   +K  V+     +   +   F+
Sbjct: 264 LLKQTGTLIVSGIIEEKKQMVLDAMIEQGFIVDQIFQ 300


>gi|228995426|ref|ZP_04155096.1| hypothetical protein bmyco0003_310 [Bacillus mycoides Rock3-17]
 gi|228764287|gb|EEM13164.1| hypothetical protein bmyco0003_310 [Bacillus mycoides Rock3-17]
          Length = 246

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 22/199 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L       +++  S   F    +  LL + A               +LDL TG 
Sbjct: 7   ERLDYLLAE----EMKIIQSPSVFNFSLDAVLLANFAWVPI-------QKGNLLDLCTGN 55

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
             + L LL         GV+I  +  ++   +   N + ER   +  D     E      
Sbjct: 56  AVIPL-LLSTRTKGNITGVEIQERLYDMGVRSIQYNKLEERIQLIHGDLKDMPEQLGRHQ 114

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +DV+  NPPY ++          ++ +  +++      +     +    S+ + + G  +
Sbjct: 115 YDVVTCNPPYFQTPKASE-----KNINEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVA 168

Query: 225 VEIGYNQKVDVVRIFESRK 243
                 + +D+V +    K
Sbjct: 169 FVHRPGRLLDIVTLMRKYK 187


>gi|325282111|ref|YP_004254653.1| Ribosomal protein L11 methyltransferase [Odoribacter splanchnicus
           DSM 20712]
 gi|324313920|gb|ADY34473.1| Ribosomal protein L11 methyltransferase [Odoribacter splanchnicus
           DSM 20712]
          Length = 283

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 73  EPRPETELLVD--------------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            P  E E+L++                L   L   E+    R+LD+G GTG + + L  +
Sbjct: 108 VPGIEYEILIEPKMSFGTGHHSTTALMLRTILDNKERITGKRVLDMGCGTGILSI-LAAK 166

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +   +  G+DI   A   A  N   NG++        +    + E  FDVI++N     +
Sbjct: 167 TGAREITGIDIDEWAYNNAMENIRANGLNNITIKIGDARLLEA-EAPFDVILAN--INRN 223

Query: 178 VIVDCLGLEVRDFDPR 193
           ++++ +   V    P+
Sbjct: 224 ILLEDMPHYVARLLPQ 239


>gi|307707103|ref|ZP_07643900.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK321]
 gi|307617629|gb|EFN96799.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK321]
          Length = 316

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|294852744|ref|ZP_06793417.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL
           07-0026]
 gi|294821333|gb|EFG38332.1| 50S ribosomal protein L11 methyltransferase [Brucella sp. NVSL
           07-0026]
          Length = 283

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 8/109 (7%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDF 190
           V+E   T  ++ F          FD+IV+N   I +  +  L   +++ 
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN---ILANPLIELAPSIKEH 239


>gi|258620959|ref|ZP_05715993.1| Ribosomal RNA large subunit methyltransferase G [Vibrio mimicus
           VM573]
 gi|258586347|gb|EEW11062.1| Ribosomal RNA large subunit methyltransferase G [Vibrio mimicus
           VM573]
          Length = 376

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 40/209 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           + + L    + +     +   +D    F L  +     +   +DLG G G + + L + +
Sbjct: 198 HAITLANLPNVY-----SGESLDLGARFMLEHLPADPALEDFIDLGCGNGVLSVRLGQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
           P  K   VD S  A   A+ N + N        + ++           ++V NPP+ +  
Sbjct: 253 PQAKITCVDESFMATASAQQNLLDNLGERDIQCITNNCLDGFPAQSSSMVVCNPPFHQQQ 312

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVD 234
            +             I+             +       L K G   V     +GY+  V 
Sbjct: 313 TITD----------HIAW-----------QMFCDSKHVLRKGGKLWVIGNRHLGYD--VK 349

Query: 235 VVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           + R+F       V        N + ++  
Sbjct: 350 LARLF---GKSQVRVI---ANNSKFVILQ 372


>gi|225678575|gb|EEH16859.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 303

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 35/175 (20%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVD----SALAFSL 90
           R  L   + +  +   +  ILG + F  + +        PR      +           L
Sbjct: 21  RRRLREMVRQRARGVPLQYILGDQPFGELEILCRRGVLIPRSRASHGIRGREVEMEGMLL 80

Query: 91  PRIEKRDVVRILDLGT------GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
                    R  D+ +      G+GA      ++ P                    A   
Sbjct: 81  DFAAAAPSHRKRDISSAQPFDNGSGAAS---KQQRP--------------------APRL 117

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV--DCLGLEVRDFDPRISLD 197
             +   DT       +      +++SNPPYI             VR ++P+++L 
Sbjct: 118 DAATDTDTDTDTETKTETKTVTILLSNPPYISPSQFRNGTTSRSVRMYEPKLALV 172


>gi|39995555|ref|NP_951506.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|60390515|sp|Q74G05|PRMA_GEOSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|39982318|gb|AAR33779.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           PCA]
 gi|298504561|gb|ADI83284.1| ribosomal protein L11 methyltransferase [Geobacter sulfurreducens
           KN400]
          Length = 299

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+GTG+G + +A        + +G DI   A+ +A  N   NGV      L +  
Sbjct: 165 PDRVLDVGTGSGILAIA-AVRLGARQVIGTDIDPDAVIVAGENCALNGVEVE---LVTTP 220

Query: 158 FSSVEGLFDVIVSN 171
            + + G FDV+++N
Sbjct: 221 LALIPGRFDVVLAN 234


>gi|331091394|ref|ZP_08340233.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330404258|gb|EGG83805.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 454

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 17/145 (11%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     +   ++  +F       +  +         I   D + I DL +GTG
Sbjct: 265 LYGQDYFYEELLGMEFKITPFSFF--QPNSVGAEVLYDTVREYIGDIDNMTIYDLFSGTG 322

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLF 165
            +   L    P  K  +GV+I  +A+E AK NA  NG+S     +  D F     +E   
Sbjct: 323 TIGQILA---PVAKEVIGVEIIEEAVEAAKENAEHNGLS-NCKFIAGDVFKVLDEIEEKP 378

Query: 166 DVIVSNPP---YIESVIVDCLGLEV 187
           DVIV +PP        +   L  +V
Sbjct: 379 DVIVLDPPRDGIHPKALPKILDYQV 403


>gi|307707511|ref|ZP_07643993.1| ribosomal protein L11 methyltransferase [Streptococcus mitis NCTC
           12261]
 gi|307616463|gb|EFN95654.1| ribosomal protein L11 methyltransferase [Streptococcus mitis NCTC
           12261]
          Length = 316

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRKSAESAGFFL 290


>gi|319945703|ref|ZP_08019954.1| ribosomal protein L11 methyltransferase [Streptococcus australis
           ATCC 700641]
 gi|319748063|gb|EFW00306.1| ribosomal protein L11 methyltransferase [Streptococcus australis
           ATCC 700641]
          Length = 317

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   D+IV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADIIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRESAEAAGFFL 291


>gi|198457386|ref|XP_001360645.2| GA20428 [Drosophila pseudoobscura pseudoobscura]
 gi|221222462|sp|Q290Z2|MET16_DROPS RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|198135956|gb|EAL25220.2| GA20428 [Drosophila pseudoobscura pseudoobscura]
          Length = 305

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 70/195 (35%), Gaps = 36/195 (18%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++++ + +  +  +  P    R    L ++  L          + VR +D+G G+  +  
Sbjct: 64  KEYFELDVDFAPGSLVPTLALRLNYILWLEDMLLPL-----NLETVRGIDVGCGSSCIYS 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWF------SSVEG 163
            L  +   +  + ++   + ++ A+ N   N + +  +      +S+ F        +  
Sbjct: 119 LLGAKKNGWNMLALESKEENIDYARENVRRNNLEDLIEVYAQPDKSNIFKSYFETEKLRK 178

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-------------GGIDGLSHYRTIA 210
            F   + NPP+ +S   +  G   R+   R + +             GG   +   + I 
Sbjct: 179 EFHFCLCNPPFFDSNSPNPFGGNTRNPQRRPAPNNVRTGSAEELTCEGGE--VHFVQRII 236

Query: 211 DGVSRHLNKDGLCSV 225
           +     LNK  +   
Sbjct: 237 EESQ--LNKQRVLIF 249


>gi|282898198|ref|ZP_06306189.1| conserved hypothetical protein (probable Methyltransferase
           activity) [Raphidiopsis brookii D9]
 gi|281196729|gb|EFA71634.1| conserved hypothetical protein (probable Methyltransferase
           activity) [Raphidiopsis brookii D9]
          Length = 393

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P+   VG+DIS   LE+A+    +
Sbjct: 40  AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVS 170
           +G + R +      +    + G FD+I S
Sbjct: 100 SG-ANRVEFHHLSIYDLDQIPGKFDLINS 127


>gi|282901083|ref|ZP_06309016.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505]
 gi|281194174|gb|EFA69138.1| Putative Methyltransferase [Cylindrospermopsis raciborskii CS-505]
          Length = 393

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P+   VG+DIS   LE+A+    +
Sbjct: 40  AAYNFCTGRKPSKQDIRILDAGCGSGVSTEYLVHLNPYSHVVGIDISPGTLEVARKRCQS 99

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVS 170
           +G + R +      +    + G FD+I S
Sbjct: 100 SG-ANRVEFHHLSIYDVDQIPGKFDLINS 127


>gi|289582403|ref|YP_003480869.1| methyltransferase small [Natrialba magadii ATCC 43099]
 gi|289531956|gb|ADD06307.1| methyltransferase small [Natrialba magadii ATCC 43099]
          Length = 309

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 39/192 (20%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F++   T +     PR    ++ ++ +A            R+LD GTGTG +  ++ +  
Sbjct: 123 FHHFERTGAPMV--PRDIGLIIGETGIAR---------GDRVLDTGTGTGVLSASMARA- 170

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                V  +   +  ++A+ N    GV++  D    D    +E              +  
Sbjct: 171 -GATVVTYERDPEFADVARENMELGGVADAVDVRTGDLTEELE--------------AGA 215

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRI 238
           ++    +V      ++LD G         I       L + G  +V   + +   DVV  
Sbjct: 216 LESAPFDV------LTLDTG-----DAAEIVTHAPELLVEGGFVAVYSPFIESTRDVVEA 264

Query: 239 FESRKLFLVNAF 250
                L  +   
Sbjct: 265 AREAGLANIRTR 276


>gi|116872902|ref|YP_849683.1| ribosomal protein L11 methyltransferase [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|123458476|sp|A0AIS2|PRMA_LISW6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116741780|emb|CAK20904.1| ribosomal protein L11 methyltransferase [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 314

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 64/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 I+D+GTG+G + +A  K       +  D+   A   A+ N + N         Q
Sbjct: 172 LQPNDEIIDVGTGSGVLSIASAKLGAKS-VLATDLDEIATRAAEENIILNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N        V  L  E                   YR      
Sbjct: 231 NNLLQDINKTNVDIVVAN----ILAEVILLFPE-----------------DVYRA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLVIEKIEQ 300


>gi|70732439|ref|YP_262201.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           fluorescens Pf-5]
 gi|123652991|sp|Q4K6D2|RSMC_PSEF5 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|68346738|gb|AAY94344.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           fluorescens Pf-5]
          Length = 332

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   + +  P  +   +D+   A   ++    
Sbjct: 177 DRGTALLLEHLDHLPAGHLLDFGCGAGVLGATVKRRYPDSRVTLLDVDAFAAASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + L  D   +     + I++NPP+   V  D    E                
Sbjct: 237 ANGLEA--EVLTGDGIDAAPMGLNGILTNPPFHTGVHTDYQATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    ++HL K G  
Sbjct: 279 -----NLLRKAAKHLQKGGEL 294


>gi|325271202|ref|ZP_08137750.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas sp. TJI-51]
 gi|324103660|gb|EGC00959.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas sp. TJI-51]
          Length = 374

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 59/200 (29%), Gaps = 37/200 (18%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-- 89
            + R        R L              Y  R  L +   E      +     L     
Sbjct: 171 KKARLLTATLAERPLARSP----------YPSRYRLDTPALELLNHANVFCREGLDIGTR 220

Query: 90  --LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             LP + +     R+ DLG G G + +A    +P  +   VD S  A++ A+ N      
Sbjct: 221 AFLPHLPRDLGRARVADLGCGNGVLAIASALANPDAEYTLVDESYMAVQSARENWRAALG 280

Query: 147 SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
               +   +D  + VE    DV++ NPP+ +  +V                     G   
Sbjct: 281 ERPANFEAADGLAGVEKQSLDVVLCNPPFHQQQVV---------------------GDFL 319

Query: 206 YRTIADGVSRHLNKDGLCSV 225
              +       L   G   +
Sbjct: 320 AWRMFQQAREALVVGGALYI 339


>gi|218187673|gb|EEC70100.1| hypothetical protein OsI_00745 [Oryza sativa Indica Group]
          Length = 624

 Score = 62.8 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      ILDL  GTG + L L + + 
Sbjct: 433 RGLTFQISANSFFQTNTKQADVLYKLIGESAGLKGDGSEIILDLFCGTGTIGLTLARRAK 492

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  AK NA  NG+S     +Q D       F       D+I+S+P
Sbjct: 493 --HVYGYEVVPEAIADAKKNAKLNGIS-NATFVQGDLNKINETFGKEFPKPDIIISDP 547


>gi|238795714|ref|ZP_04639228.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia mollaretii ATCC 43969]
 gi|238720440|gb|EEQ12242.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia mollaretii ATCC 43969]
          Length = 178

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L R+E      ++D+G GTG+V L      P  +   ++ +  AL +   N  
Sbjct: 6   EAVRALALERLELPGATHLIDVGAGTGSVALEAALRFPDLRVTAIERNPAALALIHENRQ 65

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G     + +       +    D I                             GG  G
Sbjct: 66  RLGC-HHVEIIAGVAPLPLPHSADAI---------------------------FIGGSGG 97

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN DG   +
Sbjct: 98  --HLTALIDWALMMLNPDGRLVL 118


>gi|149006563|ref|ZP_01830262.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|147761861|gb|EDK68824.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP18-BS74]
 gi|332072940|gb|EGI83421.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA17545]
          Length = 316

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|320167535|gb|EFW44434.1| Tgs1 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 522

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 42/232 (18%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH--RILGWRDFYNVRL--TLSSDTFEP 74
             Q+  + + +L D Q   L +   +       H         F   RL           
Sbjct: 264 KAQLAANAEKLLRDEQALQLPSTCAK-----PPHSKY-----WFQRYRLFSKFDEGVMMD 313

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
                 +    +A  +    +     ++D   G G   +     S F   + +DI  + +
Sbjct: 314 EEGWYSVTPEVIAAHIAW--RCAAGVVVDAFCGVGGNTIQFALSSHF--VIAIDIDPRKI 369

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-- 191
           E A+ NA   GV +R + + +D+F+ +     DV+  +PP+        L  EV   +  
Sbjct: 370 ECARHNARLYGVEDRIEFIVADFFAVAPRLRADVVFLSPPW---GGPSYLEKEVFALEDM 426

Query: 192 -PRISLDGGIDGLSHYRTI-------------ADGVSRHLNKDGLCSVEIGY 229
            PR     G +     ++I              + ++     +G C +E  Y
Sbjct: 427 LPRH----GAEIFRAAQSISPNIAYFVPRNTDLEQLAELAGPEGHCELEHNY 474


>gi|242764905|ref|XP_002340865.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218724061|gb|EED23478.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 246

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 42/190 (22%)

Query: 71  TFEPRPETELLVD--------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +EP  ++ LL+D        + L       +      I+++G+G+G V       S   
Sbjct: 15  IYEPAEDSFLLLDTLSSASEAAWLTDRFQISKSSASPLIVEVGSGSGVVIAFTAANSK-- 72

Query: 123 KGVGVDISCKALEIAKS----------NAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
                D++  A +  +           NA     +    +L  D  S ++ G  DV++ N
Sbjct: 73  --HIFDVNRDACQATRQTVQTAISETGNASR---THYLSSLTGDLVSPLKPGSVDVLLFN 127

Query: 172 PPYIESVIVDCLGLEVRD----------FDPRISL-----DGGIDGLSHYRTIADGVSRH 216
           PPY+ +  +  L    ++          F+    L      GG+DG+       + +   
Sbjct: 128 PPYVPTPDLPILPQPRQNETKSLSRSEKFEHDSYLLSLSYAGGLDGMETTNRFIEAIPSI 187

Query: 217 LNKD-GLCSV 225
           LN + G+  +
Sbjct: 188 LNPERGVAYL 197


>gi|312793397|ref|YP_004026320.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180537|gb|ADQ40707.1| RNA cap guanine-N2 methyltransferase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 389

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  NGV  + + + ++ F  
Sbjct: 218 VLDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNGVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|307354695|ref|YP_003895746.1| type 11 methyltransferase [Methanoplanus petrolearius DSM 11571]
 gi|307157928|gb|ADN37308.1| Methyltransferase type 11 [Methanoplanus petrolearius DSM 11571]
          Length = 288

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 21/113 (18%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L        K +  R+LD+G G GA+ + L +         +DIS K LE  K NA   
Sbjct: 56  VLELLEEVGFKPEGARVLDIGCGPGALAIPLARA--GADVTAIDISSKTLEYLKDNAEKE 113

Query: 145 GVSERFDTLQSDWFSS------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           G+S     ++  W+++          FD+++S            +   ++DF+
Sbjct: 114 GLS--VHPVKCHWWTADIDELGFRDQFDLVIS-----------SMTPAIKDFE 153


>gi|225859538|ref|YP_002741048.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           70585]
 gi|254783315|sp|C1C922|PRMA_STRP7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225720464|gb|ACO16318.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           70585]
          Length = 316

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|218245562|ref|YP_002370933.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|218166040|gb|ACK64777.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
          Length = 400

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 35/187 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   R  +RILD G GTG     L+  +P  + VG+D+S KALEIA+  +  
Sbjct: 41  AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSQK 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           +GV+ +      F  L  +  + + G FD+I                + V    P     
Sbjct: 101 SGVASQHNAPISFQHLNLENAAQLPGQFDLINC--------------VGVLHHLP----- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGN 256
                    + I   ++  L   G+  + +        +++ +    FL    K DY   
Sbjct: 142 ------DPIKGI-QALAEKLAPGGIFHIFVYAELGRWEIQLMQQAIAFLQGQKKGDY--K 192

Query: 257 DRVLLFC 263
           D V +  
Sbjct: 193 DGVFVGR 199


>gi|114567096|ref|YP_754250.1| 50S ribosomal protein L11 methyltransferase-like protein
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gi|122317910|sp|Q0AWM5|PRMA_SYNWW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|114338031|gb|ABI68879.1| LSU ribosomal protein L11P methyltransferase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 307

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 58/221 (26%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKR 96
           W+ +Y+      RL +     E +P++  +V                            +
Sbjct: 109 WKKYYHRFKIGERLVIKPSWEEYQPQSGEVVIDIDPGMAFGTGIHASTRFCMKFIDHYVK 168

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              +++D G G+G + +A  K     + + +D+   +++IA+ N   NG+S+       +
Sbjct: 169 GGEKLIDAGCGSGILSIAAAK-LGAARVLAMDVEELSVKIARENVELNGLSDIITVKLGN 227

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               ++    D++ +N   I + +V CL  E                           ++
Sbjct: 228 IVEEIQTFEADMVAAN---ITAEVVTCLIPE--------------------------AAK 258

Query: 216 HLNKDGLCSVEIGYNQKVD----VVRIFESRKLFLVNAFKD 252
            L   G      G          V +  ++    +    +D
Sbjct: 259 VLKSGGYFF---GSGIVDSRWPGVEKQLKTHGFVIEQVLQD 296


>gi|242213015|ref|XP_002472338.1| predicted protein [Postia placenta Mad-698-R]
 gi|220728615|gb|EED82506.1| predicted protein [Postia placenta Mad-698-R]
          Length = 194

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 10/101 (9%)

Query: 102 LDLGTGTGAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LD GTG  A+  L   + +P +  V  D+  K+L  A+ N   N + ER   +     S 
Sbjct: 10  LDSGTGASAIYPLLGCRSNPSWNFVATDVDEKSLHHARLNVQQNWLQERISPINQCRQSV 69

Query: 161 VEG---------LFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           ++           +D  + NPP+  S        EV++F+P
Sbjct: 70  LDDIHPQKCNRAKYDFTMCNPPFYSSREDVLRSAEVKEFEP 110


>gi|315231653|ref|YP_004072089.1| N6-adenine-specific RNA methylase [Thermococcus barophilus MP]
 gi|315184681|gb|ADT84866.1| N6-adenine-specific RNA methylase [Thermococcus barophilus MP]
          Length = 365

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 24/165 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A ++  + + D   ++D   G+G + + L       + +G++   K L  A+ NA+  G
Sbjct: 206 IANAMTELAEVDGGSVIDPMCGSGTILIELALRGYEGRIIGIEKYKKHLRGARMNALAAG 265

Query: 146 VSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V +R + +Q D    +      D  +SN PY   +    L                    
Sbjct: 266 VLDRIEFIQGDATKLTQYADSVDFAISNLPYGLKIGKKSLIP------------------ 307

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             Y      +S+ L K G+        +K  +   FE     +++
Sbjct: 308 KLYMEFFSELSKVLEKRGVFL----TTEKKAIEEAFEENGFKILH 348


>gi|126729900|ref|ZP_01745713.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37]
 gi|126710019|gb|EBA09072.1| hypothetical protein SSE37_05480 [Sagittula stellata E-37]
          Length = 406

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 24/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             ++D+ +  G   LA        + + VD S  AL++A++ A   GV++RF T Q D F
Sbjct: 234 ASVIDVFSHVGGFGLA-ALAGGAREVLCVDGSAPALDLARAGADAMGVADRFATRQGDAF 292

Query: 159 SSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            ++      +  +DV+V +PP                   + +LD    GL  Y  IA  
Sbjct: 293 DTLTALQEDDARYDVVVCDPPAFAPS--------------KQALD---KGLRAYERIARL 335

Query: 213 VSRHLNKDGLCSV 225
            +  + +DG   +
Sbjct: 336 AAALVAEDGYLVL 348


>gi|86153623|ref|ZP_01071826.1| ribosomal RNA small subunit methyltransferase C [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|121612928|ref|YP_001000191.1| hypothetical protein CJJ81176_0516 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005148|ref|ZP_02270906.1| hypothetical protein Cjejjejuni_02565 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|85842584|gb|EAQ59796.1| ribosomal RNA small subunit methyltransferase C [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250517|gb|EAQ73475.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 233

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +++ + N  +N +         + F S++  FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIKLIEKNLKSNQIQGDIFYDDFNQFQSIK-KFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P               +     +  L  +G    
Sbjct: 117 EDQHKAISKFQEFLP-------------LHSFLTKANSMLKPNGTLYF 151


>gi|329733198|gb|EGG69535.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 312

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVNVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|325295579|ref|YP_004282093.1| hypothetical protein Dester_1403 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066027|gb|ADY74034.1| protein of unknown function Met10 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 399

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LD     G   +         + V VD S  AL++AK NA  NGV+++F  ++ 
Sbjct: 218 KEGDRVLDAFCHLGGFGIHAAVIGKAKEVVAVDSSQLALDLAKENAKLNGVADKFQFVKG 277

Query: 156 DWFSSVE------GLFDVIVSNPP 173
           D F  ++        FD IV +PP
Sbjct: 278 DAFKVLKRMQQEGEKFDSIVIDPP 301


>gi|326403629|ref|YP_004283711.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301]
 gi|325050491|dbj|BAJ80829.1| hypothetical protein ACMV_14820 [Acidiphilium multivorum AIU301]
          Length = 239

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 8/159 (5%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R   R+++ GTG GA  L L    P  +GVG++   +   +A+ N  TNG       
Sbjct: 35  VPARPGERVIEAGTGAGAGLLCLSYRVPELRGVGIERDPELAALARDNLRTNGFEGTTII 94

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                   + G  D   +NPP+             R     ++ +   D L  +      
Sbjct: 95  TADITGPPLTGPVDHAFANPPWRPVADTPSPDPGRR-----LAYEAPGDLLPAW---TAS 146

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           ++R L   G  S+ +        +    +     +    
Sbjct: 147 LTRLLRPRGSLSLILPAASLDTALEAARAAGCGSLRILP 185


>gi|253733171|ref|ZP_04867336.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus TCH130]
 gi|253728711|gb|EES97440.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus TCH130]
          Length = 312

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVNVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|325068357|ref|ZP_08127030.1| DNA methyl transferase [Actinomyces oris K20]
          Length = 541

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 23/172 (13%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-SIHRILGWRDFYNVRLTLSSDTFEPR 75
           LSS ++ V P   ++      +   I   L  E  +    G   F   R   +++   PR
Sbjct: 23  LSSAELAVLPTQPVESLDLSQIRRLI---LDGEDPL----GQA-FCAAR---TAEERRPR 71

Query: 76  PETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            +T     +V S L ++  R+      R++D G G+G   LA L+  P   G+  D+   
Sbjct: 72  GQTFTPAPIVRSMLEWTKGRVT---PARVVDPGCGSGRYILAALRAFPHAVGLASDLDPY 128

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIV 180
           A  + ++NA   G+  R   +  D+       +EG   + + NPPY+    +
Sbjct: 129 ATLMTRANARVLGLESRLKVIVGDYRALRLPKIEG-VTLFLGNPPYVRHHNI 179


>gi|323142713|ref|ZP_08077430.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Succinatimonas hippei
           YIT 12066]
 gi|322417508|gb|EFY08125.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Succinatimonas hippei
           YIT 12066]
          Length = 444

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            +       +    F        L       ++    +      LDL  G G + L L  
Sbjct: 261 AELCGHLFNVRPHAFLQVNPYATL--ELYKKAVAWCGENKDALALDLCCGVGTMSLLLAA 318

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD----VIVSNPP 173
                K +GV+I  +A+  AK NA  N   +    + SD    +  L +     ++++P 
Sbjct: 319 HFK--KVIGVEIVEEAVAAAKENAQLNKY-DNVSFIASDLKKVLSSLINENVKAVIADPA 375

Query: 174 YIESVIVDCLGLEVRDFDPRISL 196
                  +C  L     + +++L
Sbjct: 376 RAGLGEANCRALNRFKGEVKLAL 398


>gi|182684730|ref|YP_001836477.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CGSP14]
 gi|226710120|sp|B2ISD7|PRMA_STRPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|182630064|gb|ACB91012.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CGSP14]
          Length = 316

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|315129857|gb|EFT85847.1| hypothetical protein CGSSa03_02188 [Staphylococcus aureus subsp.
           aureus CGS03]
          Length = 312

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 58/155 (37%), Gaps = 27/155 (17%)

Query: 57  WRDFYNV-----RLTLSSDT--FEPRPETELLVDSALAFSLPRIEKR------------- 96
           W+++++      + T+      +    + EL ++     +    +               
Sbjct: 112 WKNYFHPFRASKKFTIVPGWETYAKEADEELCIELDPGMAFGTGDHPTTSMCLKAIETYV 171

Query: 97  -DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + + 
Sbjct: 172 LPQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVP 229

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +        FD++++N   I + I+D +  +  +
Sbjct: 230 GNLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|295398032|ref|ZP_06808088.1| ribosomal protein L11 methyltransferase [Aerococcus viridans ATCC
           11563]
 gi|294973790|gb|EFG49561.1| ribosomal protein L11 methyltransferase [Aerococcus viridans ATCC
           11563]
          Length = 319

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA  L  I       ++D+GTG+G + +A  K+         D     L+I ++N   N 
Sbjct: 169 LALRLLEIAMAGGEDVIDVGTGSGVLAIA-AKKLGANDVAAYDYDGSILDITRNNFALND 227

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V +     Q++  + ++   D+I +N                  F+              
Sbjct: 228 VEDAISVAQNNILNDIDTQVDIITAN----------------ILFE-------------I 258

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
              +      +L   G   +  I +++K D++ +  +     V   
Sbjct: 259 LEPLIPQAYTNLKAGGQLVLSGIFHDKKDDMLALLAANDFT-VEIV 303


>gi|254708090|ref|ZP_05169918.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261315592|ref|ZP_05954789.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
 gi|261304618|gb|EEY08115.1| ribosomal protein L11 methyltransferase [Brucella pinnipedialis
           M163/99/10]
          Length = 267

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 35/163 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +E       LDLGTG+  + +A+ + +P    +  DI   A+ +A  NA  NG
Sbjct: 135 LELIEETVETEHPTNALDLGTGSAVLAIAIARLAPIP-ILATDIDPIAVTVAAENAAKNG 193

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+E   T  ++ F          FD+IV+N   + + +++                    
Sbjct: 194 VAEHIVTATAEGFGHPIFRSYSPFDLIVAN--ILANPLIE-------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRK 243
                  +A  +  HL   G   +  I  +Q   V+  ++++ 
Sbjct: 232 -------LAPSIKEHLAPGGSIILSGILDSQHDAVLAAYQTQG 267


>gi|126668278|ref|ZP_01739238.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter sp.
           ELB17]
 gi|126627304|gb|EAZ97941.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinobacter sp.
           ELB17]
          Length = 424

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           F +  L  SS  ++  PE+ L  D A    L     ++E +   ++L++GTG G   +  
Sbjct: 159 FLDPSLMYSSAIYQ-APESTL--DEASAYKLDVICRKLELKPGDQVLEIGTGWGGFAIHA 215

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            K           IS + L +AK      G+ +R   L  D +  + G +D +VS
Sbjct: 216 AKHY-GCHVTTTTISAEQLALAKQRVEAEGLQDRITLLFDD-YRDLSGQYDKLVS 268


>gi|15459276|gb|AAL00411.1| Ribosomal protein methyltransferase [Streptococcus pneumoniae R6]
          Length = 325

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 178 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 236

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 237 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 267

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 268 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 299


>gi|186684950|ref|YP_001868146.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186467402|gb|ACC83203.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 393

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +  ++  +RILD G GTG     L+  +P    VG+D+S  AL++AK     
Sbjct: 41  AAHNFCTGQKPQKQDIRILDAGCGTGVSTEYLVHLNPQASVVGIDLSTGALDVAKERCQR 100

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVS 170
           +G + R +      F    + G FD+I  
Sbjct: 101 SG-ANRVEFHHLSLFDVEQLPGEFDLINC 128


>gi|322390788|ref|ZP_08064298.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis ATCC 903]
 gi|321142458|gb|EFX37926.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis ATCC 903]
          Length = 317

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGSKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 291


>gi|315924413|ref|ZP_07920635.1| ribosomal protein L11 methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622292|gb|EFV02251.1| ribosomal protein L11 methyltransferase [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 315

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 62/178 (34%), Gaps = 42/178 (23%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   AL   L          + D+G G+G + + +  +    K VGVD    A++ 
Sbjct: 159 ETTQLCVLALEKYL-----HPDDLVYDVGCGSGILSI-VAGKLGAQKVVGVDFDPVAVDA 212

Query: 137 AKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           A+SN   N +SE+    + D     S +   D++VSN                      +
Sbjct: 213 ARSNVALNDLSEQVGIEEGDLLEVISQDHQADLVVSN---------------------IL 251

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCS---VEIGYNQKVDVVRIFESRKLFLVNA 249
           +             +AD +  +L  DG+     +        +V    + R   +V  
Sbjct: 252 A--------EVIIRLADSIRLYLKDDGIFIASGIIH--EHLNEVKNALKIRAFDIVAT 299


>gi|294678698|ref|YP_003579313.1| methyltransferase small domain-containing protein [Rhodobacter
           capsulatus SB 1003]
 gi|294477518|gb|ADE86906.1| methyltransferase small domain protein [Rhodobacter capsulatus SB
           1003]
          Length = 253

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 41/221 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F + RLT++    +PR      +D  L         +    +L+LG G G   L L    
Sbjct: 12  FLDGRLTVA----QPRQGYRAAMDPVL--LAAACGAKPGQSVLELGCGAGVASLCLGWRV 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL-FDVIVSNPPYI 175
                 G+++     ++A+ NA  NGV    +  + D     +++    +D +++NPPY 
Sbjct: 66  KGLVQAGLELQPAYADLARRNAAANGVP--LEVFEGDLARMPAALRARNYDHVIANPPYF 123

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS------RHLNKDGLCSVEIGY 229
            +                 + D G +     R +           R L   G  ++    
Sbjct: 124 AASGGTA------------AADAGRE--RAQREVTPLADWVRAGMRRLQPGGWLTLIQNA 169

Query: 230 NQKVDVVRIFESRKLFL----VNAFKDYGGN--DRVLLFCR 264
           ++  D++     +   +    + A +   G    RV++  R
Sbjct: 170 DRLGDILAALAGQGGAVTVLPIAARQ---GRAAGRVIVAAR 207


>gi|168014559|ref|XP_001759819.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688949|gb|EDQ75323.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1081

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 75/238 (31%), Gaps = 39/238 (16%)

Query: 45  SLKHESIHRILGWRD-FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
            L   S+    G+R+   ++ L      F P   +    +            RDV    +
Sbjct: 70  RLHRLSLTDYEGFRENRQSLTLLELPSIFIPEDWSFTFFEGISRHPDTGFRDRDVT---E 126

Query: 104 LGTGTGAVCLALLKES----PFFKGVGVDISCKALEIAKSNAVTNGVSE----------- 148
           LG G G V +A+ +           +G+DI+ +A+++A  N   N +++           
Sbjct: 127 LGCGNGWVSIAMAERWLPRKARIIVIGLDINPRAIKVAWINLYLNALNDDGLPVLDHEGK 186

Query: 149 ----RFDTLQSDWFSSVEGLF---DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--- 198
               R +   SD  +         D+IV   P I +     +   + +      L     
Sbjct: 187 TLLDRVEFYVSDLLAYCREQHLTMDLIVGCIPQILNPDPSAMSKLITENASEEFLYSLSN 246

Query: 199 ---------GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFL 246
                       GL      A+     +   G     IG      V  R+F  R  ++
Sbjct: 247 YCGLQGFVEDQFGLGLVARAAEEGISIIRPTGRLIFNIGGRPGQAVTERLFSRRGFYI 304


>gi|89896511|ref|YP_519998.1| hypothetical protein DSY3765 [Desulfitobacterium hafniense Y51]
 gi|89335959|dbj|BAE85554.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 446

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 47  KHESIHRILGWRDF----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
             E   RI G ++F       R  +S   F      +          L   E      + 
Sbjct: 246 SGEP-ERIAGQKEFTEDVLGARFKISPLAFLQVNPVQT--RKLYNKVLDWAELSTEKVVW 302

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFS 159
           DL  G G + LAL  ++   K  G++ +  A+E A+ NA  N V    + +     D F 
Sbjct: 303 DLYCGIGTITLALAAKAK--KVWGIEENPYAVEDARENAKRNRV-NNVEFMVGKAEDTFQ 359

Query: 160 SVEGLFDVIVSNPP 173
            +     ++V +PP
Sbjct: 360 QIGDSPHIVVLDPP 373


>gi|186685653|ref|YP_001868849.1| methyltransferase type 12 [Nostoc punctiforme PCC 73102]
 gi|186468105|gb|ACC83906.1| Methyltransferase type 12 [Nostoc punctiforme PCC 73102]
          Length = 238

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 15/115 (13%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
              +      PR +  L     +   LP       +RIL+LG GTG + L +LK  P  +
Sbjct: 15  DFDIGIRQLIPRYDEML---EVITRCLPSTS----LRILELGCGTGELSLKILKRFPNAQ 67

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGL-----FDVIVS 170
            + +D S + L+ A+     +G  +R+   Q    DW ++ E L     FD  VS
Sbjct: 68  VIALDYSPRMLQFAQHKITASGYQKRWVGTQADFGDWANNPEKLDIGSEFDACVS 122


>gi|149011363|ref|ZP_01832610.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP19-BS75]
 gi|147764353|gb|EDK71284.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP19-BS75]
          Length = 316

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIYVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLIDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|325693859|gb|EGD35778.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK150]
          Length = 318

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    VE   DVIV+N
Sbjct: 229 GDLLRGVEIEADVIVAN 245


>gi|228989243|ref|ZP_04149236.1| hypothetical protein bpmyx0001_220 [Bacillus pseudomycoides DSM
           12442]
 gi|228770453|gb|EEM19024.1| hypothetical protein bpmyx0001_220 [Bacillus pseudomycoides DSM
           12442]
          Length = 246

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 22/199 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L       +++  S   F    +  LL + A               +LDL TG 
Sbjct: 7   ERLDYLLAE----EMKIIQSPSVFNFSLDAVLLANFAWVPI-------QKGNLLDLCTGN 55

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
             + L LL         GV+I  +  ++   +   N + ER   +  D     E      
Sbjct: 56  AVIPL-LLSTRTKGNITGVEIQERLYDMGVRSIQYNKLEERIQLIHGDLKDMPEQLGRHQ 114

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +DV+  NPPY ++          ++ +  +++      +     +    S+ + + G  +
Sbjct: 115 YDVVTCNPPYFQTPKASE-----KNINEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVA 168

Query: 225 VEIGYNQKVDVVRIFESRK 243
                 + +D+V +    K
Sbjct: 169 FVHRPGRLLDIVTLMRKYK 187


>gi|254448545|ref|ZP_05062005.1| ribosomal ribonucleate guanine-2-methyltransferase [gamma
           proteobacterium HTCC5015]
 gi|198261928|gb|EDY86213.1| ribosomal ribonucleate guanine-2-methyltransferase [gamma
           proteobacterium HTCC5015]
          Length = 388

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 38/147 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQ 154
               RI+DLG G+G + +A  K+ P      +D S  A+  AK N   N G  +    + 
Sbjct: 227 PAAQRIVDLGCGSGVLGIAAQKQQPHAAVTFIDESYMAVASAKKNYQINIGDGDSVRFIA 286

Query: 155 SDWFSSVEG----------------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                +  G                L D+I+ NPP+ +   +                  
Sbjct: 287 DHQLPACRGSAFKPTCRPEGRPTPTLPDLILCNPPFHQGNTISEH--------------- 331

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   R +     + L + G   +
Sbjct: 332 ------IARGMIQQSHQALAQGGELWL 352


>gi|257058606|ref|YP_003136494.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|256588772|gb|ACU99658.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 400

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 68/187 (36%), Gaps = 35/187 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--- 140
           +A  F   R   R  +RILD G GTG     L+  +P  + VG+D+S KALEIA+     
Sbjct: 41  AAYNFCTGRKPPRQNIRILDAGCGTGVGTEYLIMLNPDAEIVGIDLSEKALEIAEERSHK 100

Query: 141 ---AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
              A  +     F  L  +  + + G FD+I                + V    P     
Sbjct: 101 SGVASQHNAPISFHHLNLENAAQLPGQFDLINC--------------VGVLHHLP----- 141

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK-DYGGN 256
                    + I   ++  L   G+  + +        +++ +    FL    K DY   
Sbjct: 142 ------DPIKGI-QALAEKLAPGGIFHIFVYAELGRWEIQLMQQAIAFLQGQKKGDY--K 192

Query: 257 DRVLLFC 263
           D V +  
Sbjct: 193 DGVFVGR 199


>gi|119510746|ref|ZP_01629873.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414]
 gi|119464610|gb|EAW45520.1| hypothetical protein N9414_05394 [Nodularia spumigena CCY9414]
          Length = 393

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 29/141 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R   +  +RILD G G+G     L+  +P  + VG+D+S   LE+AK     
Sbjct: 41  AAYNFCTGRKPPKQDIRILDAGCGSGVSTEYLVHLNPQAQVVGIDLSAGTLEVAKERCKR 100

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G ++R +      +    + G FD+I                + V    P         
Sbjct: 101 SG-ADRVEFHHLSLYDVEQLPGEFDLINC--------------VGVLHHLP--------- 136

Query: 202 GLSHYRTIADGVSRHLNKDGL 222
                R I     + L   GL
Sbjct: 137 --DPIRGIQALAKK-LAPGGL 154


>gi|226942921|ref|YP_002797994.1| rRNA (guanine-N(2))-methyltransferase [Azotobacter vinelandii DJ]
 gi|226717848|gb|ACO77019.1| rRNA (guanine-N(2))-methyltransferase [Azotobacter vinelandii DJ]
          Length = 374

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 22/128 (17%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+ DLG G G + +A    +P  +   VD S  A++ A  N          +   +D  
Sbjct: 233 ARVADLGCGNGVLAIACALANPEARLTLVDESYMAVQSATENWRATLGERPVEIRAADGL 292

Query: 159 SSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +       + ++ NPP+ +  +V                     G      +       L
Sbjct: 293 AGQAERSLEAVLCNPPFHQQQVV---------------------GDFLAWRMFQQARAAL 331

Query: 218 NKDGLCSV 225
              G   +
Sbjct: 332 VPGGALWI 339


>gi|238784315|ref|ZP_04628326.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia bercovieri ATCC 43970]
 gi|238714743|gb|EEQ06744.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia bercovieri ATCC 43970]
          Length = 176

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L R+E      ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 4   EAVRALALERLELTTAAHLIDVGAGTGSVALEAALRRPDLRVTAIERNPAALELIHENRQ 63

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G     + +       +    D I                             GG  G
Sbjct: 64  RLGCR-NVEIIAGVAPMPLPDSADAI---------------------------FIGGSGG 95

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN DG   +
Sbjct: 96  --HLTALIDWALMMLNPDGRLVL 116


>gi|319940234|ref|ZP_08014586.1| ribosomal protein L11 methyltransferase [Streptococcus anginosus
           1_2_62CV]
 gi|319810536|gb|EFW06872.1| ribosomal protein L11 methyltransferase [Streptococcus anginosus
           1_2_62CV]
          Length = 317

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 30/130 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N  +E       
Sbjct: 170 RSGEIVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIALNAGTENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V+   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVDIEADVIVAN---------------------ILA--------DILVNLTDDAYR 259

Query: 216 HLNKDGLCSV 225
            L  +G   +
Sbjct: 260 LLKDEGYLIM 269


>gi|309357303|emb|CAP35511.2| hypothetical protein CBG_17981 [Caenorhabditis briggsae AF16]
          Length = 224

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             VG+DI   AL+I   N  T  + E  D LQ D
Sbjct: 47  DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 106

Query: 157 WFSS----VEGLFDVIVSNPPY 174
                    +G FDV V NPP+
Sbjct: 107 VLDPEAKLPQGEFDVAVINPPF 128


>gi|268574134|ref|XP_002642044.1| Hypothetical protein CBG17981 [Caenorhabditis briggsae]
          Length = 259

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             VG+DI   AL+I   N  T  + E  D LQ D
Sbjct: 82  DGVKLVDIGCGCGMLMTTAATLYDLKSVVGIDIDEDALKICAKNLETADIQENCDLLQMD 141

Query: 157 WFSS----VEGLFDVIVSNPPY 174
                    +G FDV V NPP+
Sbjct: 142 VLDPEAKLPQGEFDVAVINPPF 163


>gi|15920667|ref|NP_376336.1| hypothetical protein ST0455 [Sulfolobus tokodaii str. 7]
 gi|15621450|dbj|BAB65445.1| 201aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 201

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 20/159 (12%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++   ++ L+ +T+EP  +T LL+D         I+     +++D+GTGTG + L  L +
Sbjct: 8   EYNKYKICLNDETYEPSDDTGLLLDI--------IKINKGEKVIDIGTGTGILGLHSLFQ 59

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIE 176
               + + VDI+  A E           +  +  L  D          FDV + NPPY+ 
Sbjct: 60  GAK-EVIFVDINPFATEATLCTLRMYPFTS-YHILNCDLMECFRHNVNFDVAIFNPPYLP 117

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                      R  +   S  GG  G+         V  
Sbjct: 118 YEEYH------RWIE--YSWSGGKTGVDVLVRFLRIVKA 148


>gi|328957458|ref|YP_004374844.1| ribosomal protein L11 methyltransferase [Carnobacterium sp. 17-4]
 gi|328673782|gb|AEB29828.1| ribosomal protein L11 methyltransferase [Carnobacterium sp. 17-4]
          Length = 317

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 71/226 (31%), Gaps = 62/226 (27%)

Query: 55  LGWRDFYNVRLTLSS-DTFEPRPETELL---------VDSALAFSLPRIEK--------- 95
             W+ +Y+  L ++   T  P  E   L         +D  LAF                
Sbjct: 112 TAWKKYYH-PLQVTRFLTVVPSWEEYELKHADERVIRLDPGLAFGTGTHPTTMLSLQALE 170

Query: 96  ---RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
              R    ILD+GTG+G + +A  K          D+   A++ A  N   N  ++    
Sbjct: 171 TYIRGNETILDVGTGSGVLSIA-SKALGAKHVHAYDLDDVAVKSAMDNIKLNDYAKDVTV 229

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +D    V    D++V+N   +  +IV                            +   
Sbjct: 230 EANDLLKGVTIKADIVVAN--ILSEIIVP---------------------------LIPE 260

Query: 213 VSRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNA--FKD 252
               L   GL      +E   ++K  ++   + +   ++     KD
Sbjct: 261 AYDVLKPGGLFLTSGIIE---DKKELIISEQKKQGFIIIQVQQMKD 303


>gi|284988732|ref|YP_003407286.1| methyltransferase small [Geodermatophilus obscurus DSM 43160]
 gi|284061977|gb|ADB72915.1| methyltransferase small [Geodermatophilus obscurus DSM 43160]
          Length = 374

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 52/142 (36%), Gaps = 23/142 (16%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL  +L R+   D    LDLG GTG +  +L    P    +  D S  A+  A   A  N
Sbjct: 219 ALLAALRRMTP-DARTALDLGCGTGVLATSLALARPGLTVLAGDQSAAAVASAAETAAAN 277

Query: 145 GVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV++R   ++ D  SSV     D++V NPP+     V                 G  D  
Sbjct: 278 GVADRVRVVRDDAASSVPDTSVDLVVCNPPFHLGAAVVT---------------GAAD-- 320

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                +     R L   G    
Sbjct: 321 ----RLFAAAGRVLRPGGELWC 338


>gi|163741205|ref|ZP_02148597.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
           gallaeciensis 2.10]
 gi|161385558|gb|EDQ09935.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
           gallaeciensis 2.10]
          Length = 401

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            ++  + S H  LG   FY + L    T SS  F+   E+     +A  A  + ++  + 
Sbjct: 127 AQAKANISYHYDLGNA-FYGLWLDDTMTYSSALFDTGQESLETAQTAKYASMVDQMGVKP 185

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       +E    +  G+ IS + L+ A+      G+S+R +    D 
Sbjct: 186 GDHVLEVGCGWGGFAEYAARER-GLRVTGLTISEEQLKYARERIEKAGLSDRVELRMQD- 243

Query: 158 FSSVEGLFDVIVS 170
           +   EG FD I S
Sbjct: 244 YRDCEGTFDGIAS 256


>gi|90418172|ref|ZP_01226084.1| putative ribosomal protein L11 methyltransferase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337844|gb|EAS51495.1| putative ribosomal protein L11 methyltransferase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 289

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 33/169 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L        +R     LDLGTG+  + + L K       +  DI   A+ +A++N   NG
Sbjct: 139 LETIARLATRRKPRNALDLGTGSAVLAIGLAK-LARVPVLATDIDPVAVRVARANVEANG 197

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V+   D   +  F +        +D+IV+N   I +  +  L  E               
Sbjct: 198 VANFVDCATAIGFGAEAIRERAPYDLIVAN---ILAGPLMKLAPE--------------- 239

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
               +R +A G    L+  G+        Q+  V+  F ++ L+ V   
Sbjct: 240 ---FHRHLAQGGDIVLS--GIL-----TTQRNAVLAAFRNQGLYHVATL 278


>gi|328352404|emb|CCA38803.1| hypothetical protein PP7435_Chr2-1126 [Pichia pastoris CBS 7435]
          Length = 200

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 17/144 (11%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKES-PFFK 123
              +EP  ++ LL+D       P +E      DV  ++++GTG+G V   + +   P   
Sbjct: 13  EKVYEPAEDSFLLLD-VFEKEKPWLESYKWNSDVPLVVEIGTGSGVVTTFVNQHIIPQGL 71

Query: 124 GVGVDISCKALEIA----KSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
            +  D++           K N    G       LQ D  + +     DV++ NPPY+ S 
Sbjct: 72  FLATDLNPHCCNAVLGTHKRNI---GKKGNLQVLQCDLTTPLRRNQVDVLIFNPPYVPSE 128

Query: 179 IVDCLGLEVRDFDPRI--SLDGGI 200
            V  +  +  D +  +  +L GG 
Sbjct: 129 TVPEVARD-PDSEDWLDIALLGGP 151


>gi|225626959|ref|ZP_03784998.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti str.
           Cudo]
 gi|225618616|gb|EEH15659.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti str.
           Cudo]
          Length = 441

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 75/196 (38%), Gaps = 32/196 (16%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE--PRPETELLVDSALA---FS 89
           RF   N I RS  +   H  L   +FY++ L            P    L ++ LA     
Sbjct: 123 RFQQMNTISRSSSNIKSHYDL-SGEFYDLFLDPDKQYSCAYFDPPNATLAEAQLAKKRHI 181

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             ++  ++  ++LD+G G G + L L +        GV +S +   IA   A   G+++R
Sbjct: 182 AAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEEQHAIANQRARDEGLADR 240

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                +D + ++   FD +VS                V  F+          G+ H+   
Sbjct: 241 AKFELTD-YRNINDKFDRLVS----------------VGMFE--------HVGVGHFAEY 275

Query: 210 ADGVSRHLNKDGLCSV 225
              V+R +  DG+  +
Sbjct: 276 FQHVARLMKPDGVFLL 291


>gi|94985722|ref|YP_605086.1| rRNA (guanine-N(2)-)-methyltransferase [Deinococcus geothermalis
           DSM 11300]
 gi|94556003|gb|ABF45917.1| 16S rRNA m(2)G 1207 methyltransferase [Deinococcus geothermalis DSM
           11300]
          Length = 407

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 31/174 (17%)

Query: 56  GWRDFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           G+  F  V++      F   +P   T LL+ +  A  L  ++     R+LDLG GTG + 
Sbjct: 225 GYEAF-GVKVVGLPGVFSAAKPDKATTLLLGTLEALDLTELD-LTGKRVLDLGCGTGLMG 282

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSN 171
               +     +   VD   +++  A++    NG+S   D   SD  +++ E  FDVI++N
Sbjct: 283 AWAARR--GAQVTLVDGDLQSVRSAQATLAANGLSG--DVFLSDVDAALGERTFDVILTN 338

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           PP+     V                      L   R       R LN  G   +
Sbjct: 339 PPFHVGRGVV---------------------LDVAREFIAAAGRRLNPGGTLYL 371


>gi|238784178|ref|ZP_04628191.1| Methyltransferase small [Yersinia bercovieri ATCC 43970]
 gi|238714887|gb|EEQ06886.1| Methyltransferase small [Yersinia bercovieri ATCC 43970]
          Length = 238

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            +      ++LD+G G+G + L + +  S      GV++  +A + A SNA  +  + R 
Sbjct: 32  WVSVEKARKVLDIGCGSGLIALMIAQRSSSEVLIDGVELESEAAQQASSNAALSPWAARI 91

Query: 151 DTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                D      +    +D+IVSNPPY    +      E RD            G   + 
Sbjct: 92  RIYAQDVHQFAENHPHQYDLIVSNPPYFSPAVACR--DEARD-------TARYTGSLTHD 142

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA---FKDYGGND--RVLL 261
            + +   + +  +G+  V +  +  +++ R+   +K F V +    +D  G    R+LL
Sbjct: 143 ALLNCAEQLITDEGMFCVVLPQDLGIELARLAGQKKWF-VRSQVDIRDRPGKPLHRMLL 200


>gi|312877028|ref|ZP_07737001.1| protein of unknown function Met10 [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796169|gb|EFR12525.1| protein of unknown function Met10 [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 389

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  NGV  + + + ++ F  
Sbjct: 218 VLDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNGVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|325283595|ref|YP_004256136.1| methyltransferase small [Deinococcus proteolyticus MRP]
 gi|324315404|gb|ADY26519.1| methyltransferase small [Deinococcus proteolyticus MRP]
          Length = 387

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG GTG +     +       V  D+    +  A+     NG+S   + + SD  + 
Sbjct: 251 VLDLGCGTGLIGAWAAQRGAAVTLVDGDLQS--VRSARLTLAANGLSG--EAIHSDVDAD 306

Query: 161 V-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           + E  FD++++NPP+     V                      L   R       R LN 
Sbjct: 307 LGERRFDMVLTNPPFHVGRGVV---------------------LDVAREFIAAARRRLNP 345

Query: 220 DGLCSV 225
            G   +
Sbjct: 346 GGRLIL 351


>gi|294139498|ref|YP_003555476.1| hypothetical protein SVI_0727 [Shewanella violacea DSS12]
 gi|293325967|dbj|BAJ00698.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 250

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 52/171 (30%), Gaps = 21/171 (12%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF- 150
                    +LD+G G+G + L +  +        +++   A    + N   +   ER  
Sbjct: 36  WAPLTRAQNVLDIGAGSGLLSL-MAAQRSAATITAIELDETAASACERNFKASNWGERLV 94

Query: 151 -------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                  D  Q    + +   FD I+ NPPY +                  +     D L
Sbjct: 95  IEECAIQDFAQQRLNTQI--KFDHIICNPPYFKGGTQSKNQ--------LRAKARHTDTL 144

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                +   ++R L  DG  S+ +        +      +L +     D  
Sbjct: 145 DFS-CLIKAMTRLLAVDGTASLILPSQSMPCFLEELTQSELTMTRVM-DIA 193


>gi|257482047|ref|ZP_05636088.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 308

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++    
Sbjct: 153 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 212

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 213 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 254

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 255 -----NLLRKARQHLKSGGEL 270


>gi|226227548|ref|YP_002761654.1| rRNA methyltransferase [Gemmatimonas aurantiaca T-27]
 gi|226090739|dbj|BAH39184.1| rRNA methyltransferase [Gemmatimonas aurantiaca T-27]
          Length = 447

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 56/153 (36%), Gaps = 24/153 (15%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   +   +D A       +  R   R+LDLG G GA+ + +         V  D    A
Sbjct: 282 PGVFSWEHLDEATVLLADVMNIRRGDRVLDLGCGAGALGV-VASIRSGVPAVLADADADA 340

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +  A+  A   GV +    L SD  S+VE   FDV+VSNPP+     +D           
Sbjct: 341 VRGAQRTAREAGVPD-VRVLASDVASAVEDQAFDVVVSNPPFHVGKSID----------- 388

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     L+  R   D   R L   G   +
Sbjct: 389 ----------LTVPRAFIDDAWRTLAPGGRLYI 411


>gi|213408367|ref|XP_002174954.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
 gi|212003001|gb|EEB08661.1| UbiE-like methyltransferase [Schizosaccharomyces japonicus yFS275]
          Length = 272

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                  R  ++  V ++ AF LP +  +D +RILD+G G G + +   +  P  + +G+
Sbjct: 11  HPSVL--RSHSKRTVRNSAAFVLPFL--KDGMRILDIGCGPGTITIDFARMLPQAQVIGI 66

Query: 128 DISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSN 171
           D+S   + IA+ NA    + + +F+          +  FD++ ++
Sbjct: 67  DMSKDVINIAEENARRAKIKNVQFEVGDIHTLQQPKNNFDMVFAH 111


>gi|39945520|ref|XP_362297.1| hypothetical protein MGG_04742 [Magnaporthe oryzae 70-15]
 gi|145021372|gb|EDK05501.1| hypothetical protein MGG_04742 [Magnaporthe oryzae 70-15]
          Length = 263

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 40/196 (20%)

Query: 70  DTFEPRPETELLVDSALA-----FSLPRIEKRDVVRILDLGTGTGA-VCLALLKESP--- 120
             +EP  ++ L +D+  +     F   R +      ++++GTG+G  +     +      
Sbjct: 14  RIYEPAEDSFLFLDTISSPLETTFLTSRFQDGPTPLVVEVGTGSGVVIGFVAAQARHIFG 73

Query: 121 ----FFKGVGVDISCKALEIAKSNAVTNGVSER---------------FDTLQSDWFSSV 161
                    GVD++  A              E                  ++++D  S++
Sbjct: 74  GSHGAVVATGVDVNAFACAATAETVRRAVKDEEKESASGAGAGASGLYLGSVRADLGSAL 133

Query: 162 -EGLFDVIVSNPPYIESVIVDCLGLEV----------RD-FDPRISLDGGIDGLSHYRTI 209
             G  DV++ NPPY+ +  +    +E           RD +   +S  GG DG+     +
Sbjct: 134 RPGQVDVLLFNPPYVPTPDMPVRDVEAELQKGGDDFARDSYLLELSYAGGRDGMETTDRL 193

Query: 210 ADGVSRHLNKDGLCSV 225
            D +   L+  G   +
Sbjct: 194 IDALPELLSDKGCAYI 209


>gi|296877183|ref|ZP_06901223.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis ATCC 15912]
 gi|296431703|gb|EFH17510.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis ATCC 15912]
          Length = 316

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|209550153|ref|YP_002282070.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226710104|sp|B5ZWH3|PRMA_RHILW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|209535909|gb|ACI55844.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 292

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 57/173 (32%), Gaps = 41/173 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 140 LEAIDAVVRSRPVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATRVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N                              
Sbjct: 199 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN------------------------------ 228

Query: 202 GLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                R +     +   HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 229 --ILARPLIRMAPKLATHLAPGGSVILSGILATQRWKVIAAYSGARLRHVRTI 279


>gi|118473287|ref|YP_886258.1| transferase [Mycobacterium smegmatis str. MC2 155]
 gi|118174574|gb|ABK75470.1| transferase [Mycobacterium smegmatis str. MC2 155]
          Length = 499

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 64/187 (34%), Gaps = 21/187 (11%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L +  A       + +    R+LDLGTG G   L L   S        +    AL
Sbjct: 137 RHDHVLGIGGASVSLARAVMRTPADRVLDLGTGCGIQALHLDAHSDHIVATDTNARALAL 196

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
                 A        +D      F  V G  FD+IVSNPP++            RD+   
Sbjct: 197 AA----ATARLNGMSWDLRHGSLFEPVAGERFDLIVSNPPFVVGSG-------ARDY--- 242

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY------NQKVDVVRIFESRKLFLV 247
           I  D G+ G +  + + + V  HLN  G   +   +      + +  V        L   
Sbjct: 243 IYRDSGMAGDTVCQKLIEQVGDHLNPGGTAHIMANWIVKRDTDWRDRVAGWLAGTGLHAW 302

Query: 248 NAFKDYG 254
              ++  
Sbjct: 303 VVQRELA 309


>gi|312867974|ref|ZP_07728178.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis F0405]
 gi|311096378|gb|EFQ54618.1| ribosomal protein L11 methyltransferase [Streptococcus
           parasanguinis F0405]
          Length = 317

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 291


>gi|295688726|ref|YP_003592419.1| putative RNA methylase [Caulobacter segnis ATCC 21756]
 gi|295430629|gb|ADG09801.1| putative RNA methylase [Caulobacter segnis ATCC 21756]
          Length = 219

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 13/157 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+L+ G G G   LA     P     GV+    A  +A  NA  N +SER   L+ D
Sbjct: 14  PGQRVLEPGCGVGGALLAAATRRPGVIFQGVERDSLAASLATENAALNDLSERVAILEGD 73

Query: 157 WFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +    L    FD +++NPP+ +           +     ++ DG   GL  + T    
Sbjct: 74  VEAGFRALGLPAFDAVMTNPPFFDDPATLRAPHPAKSG-AWMA-DG---GLKAWTTFCLK 128

Query: 213 VSRHLNKDGLCSVEIGYNQKVD-VVRIFESRKLFLVN 248
             R   + G  ++    ++  D +  +      F + 
Sbjct: 129 AVR---EGGTITIIHRADRLADILAELAPKAGSFRIR 162


>gi|57651971|ref|YP_186475.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus COL]
 gi|81859578|sp|Q5HFI2|PRMA_STAAC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|57286157|gb|AAW38251.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus COL]
          Length = 312

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|15669845|ref|NP_248659.1| hypothetical protein MJ_1649 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3334438|sp|Q59043|Y1649_METJA RecName: Full=Putative ribosomal RNA large subunit
           methyltransferase MJ1649
 gi|1592232|gb|AAB99670.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 387

 Score = 62.8 bits (152), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL++A+ N   N +  +R++ ++
Sbjct: 212 KEGDRVLDICCYTGGFSVHAAIR--GAEVVGVDLSKKALKLAEENIELNNIPKDRYEFIE 269

Query: 155 SDWFS------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + F         +  FDV++ +PP       D +   +R +     L     G+   + 
Sbjct: 270 GNAFEVMKEMIEDKEKFDVVILDPPAFTQTE-DDIKNALRAYASLNYL-----GIKLAKR 323

Query: 209 IA 210
           I 
Sbjct: 324 IF 325


>gi|313500552|gb|ADR61918.1| Ribosomal RNA large subunit methyltransferase G [Pseudomonas putida
           BIRD-1]
          Length = 374

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 48/138 (34%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A    +P  +   VD S  A++ A+ N +      
Sbjct: 223 LPHLPRDLGRARVADLGCGNGVLAIASALANPEAEYTLVDESYMAVQSARENWLAALGER 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                 +D  + +E    DV++ NPP+ +  +V                     G     
Sbjct: 283 PATFFAADGLAGLEKQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|21283259|ref|NP_646347.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49486413|ref|YP_043634.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|87160836|ref|YP_494233.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88195387|ref|YP_500191.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|151221693|ref|YP_001332515.1| ribosomal protein L11 methylase [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|161509806|ref|YP_001575465.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|221140002|ref|ZP_03564495.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus str. JKD6009]
 gi|258450593|ref|ZP_05698655.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A5948]
 gi|262049151|ref|ZP_06022028.1| hypothetical protein SAD30_0308 [Staphylococcus aureus D30]
 gi|262051238|ref|ZP_06023462.1| hypothetical protein SA930_1669 [Staphylococcus aureus 930918-3]
 gi|282920127|ref|ZP_06327852.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9765]
 gi|284024637|ref|ZP_06379035.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 132]
 gi|294848609|ref|ZP_06789355.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9754]
 gi|297207703|ref|ZP_06924138.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300911784|ref|ZP_07129227.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304380833|ref|ZP_07363493.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|38605350|sp|Q8NWB0|PRMA_STAAW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|60390419|sp|Q6G8Y9|PRMA_STAAS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|122539399|sp|Q2FXZ4|PRMA_STAA8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|123485612|sp|Q2FGE5|PRMA_STAA3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|172048910|sp|A6QHC1|PRMA_STAAE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189037708|sp|A8Z4B7|PRMA_STAAT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|21204699|dbj|BAB95395.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244856|emb|CAG43317.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|87126810|gb|ABD21324.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87202945|gb|ABD30755.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|150374493|dbj|BAF67753.1| ribosomal protein L11 methylase [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160368615|gb|ABX29586.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257861751|gb|EEV84550.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A5948]
 gi|259160875|gb|EEW45895.1| hypothetical protein SA930_1669 [Staphylococcus aureus 930918-3]
 gi|259162820|gb|EEW47385.1| hypothetical protein SAD30_0308 [Staphylococcus aureus D30]
 gi|269941068|emb|CBI49452.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282594475|gb|EFB99460.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9765]
 gi|294824635|gb|EFG41058.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9754]
 gi|296887720|gb|EFH26618.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300886030|gb|EFK81232.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|302751408|gb|ADL65585.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus str. JKD6008]
 gi|304340560|gb|EFM06494.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315198726|gb|EFU29054.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140537|gb|EFW32391.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320144074|gb|EFW35843.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329314254|gb|AEB88667.1| Ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329728381|gb|EGG64818.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 312

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|315613655|ref|ZP_07888562.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           ATCC 49296]
 gi|315314346|gb|EFU62391.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           ATCC 49296]
          Length = 317

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 291


>gi|313887799|ref|ZP_07821479.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846142|gb|EFR33523.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 443

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 23/203 (11%)

Query: 2   QALRDSHSFLCRVTGLSS----HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           Q+  D  +F+  + GL        +    +  L D         I      +    I   
Sbjct: 210 QSQLDEEAFIKFLLGLDLKGQIVSIYHVKNDALSDAIVPEEIKLIY----GK--DHI--E 261

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            +   +R  +S  +F  +  T+   +     +  +I+ +D + + DL +GTG +   L +
Sbjct: 262 EEVLGLRFKISPFSF-FQTNTKS-AEVLYKMAREKIDAKDKL-VFDLYSGTGTITQVLAE 318

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
            +   K +GV+I  +A+E A+ NA  NG+ +  + + SD       ++   D+IV +PP 
Sbjct: 319 SAK--KVIGVEIVEEAVEAARENAKLNGI-DNVEFIASDVLKVLDDLDKNPDLIVLDPP- 374

Query: 175 IESVIVDCLGLEVRDFDPRISLD 197
               I      ++ DFDP   L 
Sbjct: 375 -REGINPKAIDKIIDFDPEKFLY 396


>gi|312963164|ref|ZP_07777649.1| rRNA (guanine-N2-)-methyltransferase [Pseudomonas fluorescens WH6]
 gi|311282675|gb|EFQ61271.1| rRNA (guanine-N2-)-methyltransferase [Pseudomonas fluorescens WH6]
          Length = 374

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 46/138 (33%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A   ++P  +   VD S  A++ A  N      + 
Sbjct: 223 LPHLPENLGSARVADLGCGNGVLAIASALQNPDAQYTLVDESYMAVQSAAQNWQAALGAR 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D  +  E    DV++ NPP+ +  +V                     G     
Sbjct: 283 DVTVRAGDGLAGQEPQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|219848628|ref|YP_002463061.1| ribosomal protein L11 methyltransferase [Chloroflexus aggregans DSM
           9485]
 gi|219542887|gb|ACL24625.1| ribosomal protein L11 methyltransferase [Chloroflexus aggregans DSM
           9485]
          Length = 327

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 70/230 (30%), Gaps = 57/230 (24%)

Query: 57  WRDFYNV-------RLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKR 96
           W+ FY+V        +  S   ++P+P+  +L               + L   L     +
Sbjct: 107 WKQFYSVLRIGERTVIVPSWLEYQPQPDDIVLWLDPGMAFGTGLHPTTRLCLQLLERMVQ 166

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LDLGTG+G + +A  K       + +D    A+ +A+ N   N V+      +  
Sbjct: 167 PDQHVLDLGTGSGILAIAAAKLGAG-HVLALDNDPIAVRVAQENVERNQVNAVVQVAEGS 225

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG---- 212
                             +   +   L  +    +P  +L       + +  IA      
Sbjct: 226 LG----------------VGQAMGHWLSGDFGPAEPDPALRA-QTPQAIFDLIAANLIAK 268

Query: 213 -----VSRH---LNKDGLCSVEIGYN----QKVDVVRIFESRKLFLVNAF 250
                       L   G     I       ++ +V+  F    L +V   
Sbjct: 269 VLVTLAPDLAAALKPGGYL---ISSGIIDIKEREVIAAFAKVGLTMVERH 315


>gi|114762106|ref|ZP_01441574.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pelagibaca
           bermudensis HTCC2601]
 gi|114545130|gb|EAU48133.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp.
           HTCC2601]
          Length = 410

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114
           +R F +  +  S   F  RP+  L    A    L   ++     +R+LD+G G G + L 
Sbjct: 133 YRLFLDEDMQYSCAYFA-RPDMTLEAAQAAKKDLIARKLRITPGMRVLDIGCGWGGMALT 191

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L ++    + VGV +S   L  A++ A   G+S++ +    D +  V   FD IVS
Sbjct: 192 LARDY-GARVVGVTLSENQLATAQARAEEAGLSDKVEFRLLD-YRKVGETFDRIVS 245


>gi|325688554|gb|EGD30571.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK72]
          Length = 318

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 37/155 (23%)

Query: 96  RDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R    +LD+GTG+G + +  +LL           D+   A+ +A+ N   N   E     
Sbjct: 171 RGGETVLDVGTGSGVLSIGSSLLGAK---DIYAYDLDEVAVRVAQENIELNPDMENIHVA 227

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D    VE   DVIV+N                      ++             + +  
Sbjct: 228 PGDLLRGVEINADVIVAN---------------------ILA--------DILIHLTEDA 258

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            R +  +G   +   I       V    E+   FL
Sbjct: 259 YRLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|320591480|gb|EFX03919.1| n-glutamine methyltransferase mtq2 [Grosmannia clavigera kw1407]
          Length = 264

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 78/233 (33%), Gaps = 54/233 (23%)

Query: 70  DTFEPRPETELLV-------DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
             +EP  ++ L++       ++A        +      ++++G+G+G V   +  ++   
Sbjct: 14  RVYEPAEDSFLMIDTLAGPTETAFLQGRFGGDSSSTPLVVEVGSGSGVVLAFVAAQAAHL 73

Query: 123 KG-------VGVDISCKALEIAKSNAVTNGVSE------------RFDTLQSDWFSSV-E 162
            G       + VD++  A              E                +++D  S +  
Sbjct: 74  FGRDGHVMSMAVDVNAFACRATAETVRRAMREEGDEEKTERAGVSFLGAVRADLVSGLRP 133

Query: 163 GLFDVIVSNPPYIESVIVDCLGLE-----------------VRD-FDPRISLDGGIDGLS 204
           G  DV++ NPPY+ S  +  L  E                  RD     ++ DGG DG+ 
Sbjct: 134 GQVDVLLFNPPYVPSPELPGLPKEEEEDGMKNTSKNSSLTFARDCHLLALACDGGRDGME 193

Query: 205 HYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
               +   +   L   G   V +   N+   V           + A+ D GG 
Sbjct: 194 TTDRLLAALPVVLATRGCAYVLLCAQNRPEAVKE--------RIRAWADEGGR 238


>gi|258446823|ref|ZP_05694977.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A6300]
 gi|257854398|gb|EEV77347.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A6300]
          Length = 312

 Score = 62.4 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|170289748|ref|YP_001736564.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173828|gb|ACB06881.1| putative RNA methylase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 193

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL      +   +   + DLG G G + +           +G+D+  +A+EIAK NA  
Sbjct: 25  AALIHMCYMMGDLEGKSVADLGCGNGILAIG-ALLYGASSAIGIDLDPEAIEIAKRNADR 83

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            G+  R   L  D         D ++ NPP+
Sbjct: 84  LGLLGRARFLVMDV-RDFSEEVDTVIQNPPF 113


>gi|145355780|ref|XP_001422128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582368|gb|ABP00445.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 493

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+   TG   L           V VD S  AL++AK NA  NG+ ++ + +++D 
Sbjct: 316 GKRVLDVCCYTGGFALNAAL-GGASDVVAVDSSESALDMAKKNAELNGLQDKVNFVRADA 374

Query: 158 FSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           F  ++        G +DV+V +PP         L   +  +           GL+     
Sbjct: 375 FDFMQAEIDAGRAGSYDVVVLDPPKFAPT-KPALKKAIPKY----------VGLN----- 418

Query: 210 ADGVSRHLNKDGLCS 224
                  L   G+  
Sbjct: 419 -KRAMTLLRPGGILI 432


>gi|219667634|ref|YP_002458069.1| RNA methyltransferase, TrmA family [Desulfitobacterium hafniense
           DCB-2]
 gi|219537894|gb|ACL19633.1| RNA methyltransferase, TrmA family [Desulfitobacterium hafniense
           DCB-2]
          Length = 446

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 13/134 (9%)

Query: 47  KHESIHRILGWRDF----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
             E   RI G ++F       R  +S   F      +          L   E      + 
Sbjct: 246 SGEP-ERIAGQKEFTEDVLGARFKISPLAFLQVNPVQT--RKLYNKVLDWAELSTEKVVW 302

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFS 159
           DL  G G + LAL  ++   K  G++ +  A+E A+ NA  N V    + +     D F 
Sbjct: 303 DLYCGIGTITLALAAKAK--KVWGIEENPYAVEDARENAKRNRV-NNVEFMVGKAEDTFQ 359

Query: 160 SVEGLFDVIVSNPP 173
            +     ++V +PP
Sbjct: 360 QIGDYPHIVVLDPP 373


>gi|282916848|ref|ZP_06324606.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
 gi|282319335|gb|EFB49687.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus D139]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|258424006|ref|ZP_05686888.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9635]
 gi|283770654|ref|ZP_06343546.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus H19]
 gi|257845627|gb|EEV69659.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9635]
 gi|283460801|gb|EFC07891.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus H19]
 gi|283470857|emb|CAQ50068.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ST398]
 gi|302333254|gb|ADL23447.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus JKD6159]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|210608457|ref|ZP_03287833.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787]
 gi|210153033|gb|EEA84039.1| hypothetical protein CLONEX_00012 [Clostridium nexile DSM 1787]
          Length = 546

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 15/130 (11%)

Query: 53  RILGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           RIL  +DF+     ++   ++  +F  +P T+   +         I     + + DL +G
Sbjct: 263 RILYGQDFFYEKLLDMDFKITPFSF-FQPNTK-GAEILYKTVRDYIGDIHNMTVFDLFSG 320

Query: 108 TGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG 163
           TG +   L    P   + +GV+I  +A+E AK NA  NG+S     +  D F     +E 
Sbjct: 321 TGTIAQVLA---PVAKQVIGVEIVEEAVEAAKENAEHNGLS-NCRFIAGDVFKVLDEIEE 376

Query: 164 LFDVIVSNPP 173
             DVIV +PP
Sbjct: 377 KPDVIVLDPP 386


>gi|145225271|ref|YP_001135949.1| methyltransferase small [Mycobacterium gilvum PYR-GCK]
 gi|145217757|gb|ABP47161.1| methyltransferase small [Mycobacterium gilvum PYR-GCK]
          Length = 502

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 21/187 (11%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L +  A       + +  V R LDLGTG G   L L  E+   + V  D + +AL
Sbjct: 138 RRDHVLGIGGASVSLAHAVVRDPVGRALDLGTGCGIQALHL--EAHCDEIVATDTNPRAL 195

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A + A  NG+S  +D      F  V G  FD+IVSNPP++  V    L    R     
Sbjct: 196 ALAAATARLNGMS--WDLRCGSMFEPVAGERFDLIVSNPPFV--VGTGSLDYIYR----- 246

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY------NQKVDVVRIFESRKLFLV 247
              D G+ G    + +   V  HL   G   +   +      N +  V        L   
Sbjct: 247 ---DSGMAGDGLCQNLIAQVRDHLRPGGTAQIMANWIVRDPQNWQERVHGWLADTGLHAW 303

Query: 248 NAFKDYG 254
              +++ 
Sbjct: 304 VVQREFA 310


>gi|15924568|ref|NP_372102.1| methyltransferase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927158|ref|NP_374691.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus N315]
 gi|148268062|ref|YP_001247005.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150394130|ref|YP_001316805.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156979896|ref|YP_001442155.1| hypothetical protein SAHV_1565 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316053|ref|ZP_04839266.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253732231|ref|ZP_04866396.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|255006364|ref|ZP_05144965.2| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257793654|ref|ZP_05642633.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9781]
 gi|258411046|ref|ZP_05681326.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9763]
 gi|258420150|ref|ZP_05683105.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9719]
 gi|258437410|ref|ZP_05689394.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9299]
 gi|258443616|ref|ZP_05691955.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8115]
 gi|258448737|ref|ZP_05696849.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A6224]
 gi|258453554|ref|ZP_05701532.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A5937]
 gi|269203206|ref|YP_003282475.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893079|ref|ZP_06301313.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8117]
 gi|282928211|ref|ZP_06335816.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A10102]
 gi|295406701|ref|ZP_06816506.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8819]
 gi|296275800|ref|ZP_06858307.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297245717|ref|ZP_06929582.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8796]
 gi|60392929|sp|P0A0P3|PRMA_STAAM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|60392930|sp|P0A0P4|PRMA_STAAN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|60392931|sp|P0A0P5|PRMA_STAAU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223491|sp|A7X2X9|PRMA_STAA1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189037706|sp|A6U250|PRMA_STAA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189037707|sp|A5ITA6|PRMA_STAA9 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|487331|dbj|BAA06361.1| ORF35 [Staphylococcus aureus]
 gi|13701376|dbj|BAB42670.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247349|dbj|BAB57740.1| Ribosomal protein L11 methylase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|147741131|gb|ABQ49429.1| LSU ribosomal protein L11P methyltransferase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149946582|gb|ABR52518.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|156722031|dbj|BAF78448.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253724020|gb|EES92749.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257787626|gb|EEV25966.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9781]
 gi|257840196|gb|EEV64660.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9763]
 gi|257843861|gb|EEV68255.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9719]
 gi|257848615|gb|EEV72603.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A9299]
 gi|257851022|gb|EEV74965.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8115]
 gi|257858015|gb|EEV80904.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A6224]
 gi|257864285|gb|EEV87035.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A5937]
 gi|262075496|gb|ACY11469.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282590018|gb|EFB95100.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A10102]
 gi|282764397|gb|EFC04523.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8117]
 gi|285817260|gb|ADC37747.1| Ribosomal protein L11 methyltransferase [Staphylococcus aureus
           04-02981]
 gi|294968448|gb|EFG44472.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8819]
 gi|297177368|gb|EFH36620.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           A8796]
 gi|312829966|emb|CBX34808.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|329727182|gb|EGG63638.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 21172]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|306824714|ref|ZP_07458058.1| ribosomal protein L11 methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304432925|gb|EFM35897.1| ribosomal protein L11 methyltransferase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 316

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|303229607|ref|ZP_07316395.1| methyltransferase small domain protein [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515732|gb|EFL57686.1| methyltransferase small domain protein [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 242

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 23/195 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +   LV                 R +DLGTGTG + L +      
Sbjct: 14  DLKIYQRQDQFRFSFDAIALVHFC--------RFNQRHRYIDLGTGTGVLPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
               GV+I+     +A+ + + N  S     +Q D+ +          FD ++ NPPY  
Sbjct: 65  GHITGVEINDVMANMAERSVLYNHKSNVISIVQGDYRTMNYQQFGSKPFDGVLVNPPYF- 123

Query: 177 SVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               D    EV  +    ++L    DG +    +    SR +   G   +     +  ++
Sbjct: 124 ----DHRRGEVPNNHHLSLAL---HDGCTSIDDVCTAASRLIKNKGRLWMVYSAPRLSEL 176

Query: 236 VRIFESRKLFLVNAF 250
           +    +    +    
Sbjct: 177 IHALTAVGFTVKRIR 191


>gi|298694860|gb|ADI98082.1| probable methyltransferase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|323440476|gb|EGA98188.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus O11]
 gi|323443250|gb|EGB00868.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus O46]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|330964993|gb|EGH65253.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 332

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLEAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLKKARQHLKSGGEL 294


>gi|322377484|ref|ZP_08051975.1| ribosomal protein L11 methyltransferase [Streptococcus sp. M334]
 gi|321281684|gb|EFX58693.1| ribosomal protein L11 methyltransferase [Streptococcus sp. M334]
          Length = 316

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|260771831|ref|ZP_05880749.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           metschnikovii CIP 69.14]
 gi|260613123|gb|EEX38324.1| ribosomal RNA small subunit methyltransferase C [Vibrio
           metschnikovii CIP 69.14]
          Length = 340

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 29/165 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + +      F        L    L  SLP ++     ++LD G G G +   +   +P
Sbjct: 170 HTLTIRSLPGVFSHGEFD--LGSQLLLDSLPSLQG----KVLDFGCGAGVLGCVMSILNP 223

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    DIS  A+  +++    NG++ R     SD +S     +  IV+NPP+   +  
Sbjct: 224 EIQLEMCDISALAIYSSQATLAANGLTGRVFA--SDVYSDTGQDYQSIVTNPPFHSGLDT 281

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                E                     T+      HL   G   V
Sbjct: 282 SYRATE---------------------TLLQQAPNHLTASGQLFV 305


>gi|119486111|ref|ZP_01620171.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
 gi|119456602|gb|EAW37731.1| hypothetical protein L8106_17247 [Lyngbya sp. PCC 8106]
          Length = 297

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 85/240 (35%), Gaps = 48/240 (20%)

Query: 22  VIVDPDSVLDDRQRFFLTNAI-----VRSLKHESIHR--ILGWRDFYNVR---------L 65
           + +  + ++D         +I        L +  +        ++F+ ++         +
Sbjct: 14  LPLFGNVLVDQEALKQFKQSINWEEESTRLTNPRLTYPDYYHSQNFHGIKGGYLNSEAPV 73

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
           +    T    P TE +V   L   +    +    +ILDLG GTG+  L L +  P  + +
Sbjct: 74  SYDPITQYVLPPTEPIVRQGLIDRI----RVKPRQILDLGCGTGSTTLRLKQAFPEAEVI 129

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G+D+S   L +A+  A   G+  +F    ++     +G FD++ +      S++      
Sbjct: 130 GIDLSPYMLVVAELKAKKAGLEIQFHHANAEDTGFPDGSFDLVSA------SLLFHETPP 183

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK----VDVVRIFES 241
           +V                   +TI     R L   G   V  G  Q       +  IFE 
Sbjct: 184 DV------------------AQTITQESFRLLRVGGEMIVLDGNQQTLRQNEWLTEIFEE 225


>gi|59712744|ref|YP_205520.1| 16S rRNA m2G1207 methylase [Vibrio fischeri ES114]
 gi|75353430|sp|Q5E2W4|RSMC_VIBF1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|59480845|gb|AAW86632.1| 16S rRNA m2G1207 methylase [Vibrio fischeri ES114]
          Length = 339

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 35/171 (20%)

Query: 59  DFYNVRLTLS--SDTFEPRPETE--LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +F N  + +      F      +   L    L  +LP +       +LD G G G +   
Sbjct: 165 EFENHTIEVRSLPGVFSHGEFDKGSEL----LLQTLPALRG----HVLDFGCGAGVIGSV 216

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +   +P      VDIS  A+  +      N +        SD +S  +  +  IVSNPP+
Sbjct: 217 MKTINPKIHLDMVDISALAIASSIETLKANNLEGNVFA--SDVYSDTKENYQFIVSNPPF 274

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +       E                      + +   ++L  +G   +
Sbjct: 275 HAGLKTHYSSTE---------------------ELLEKAPQNLTHEGQLIL 304


>gi|329766402|ref|ZP_08257948.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137171|gb|EGG41461.1| putative methylase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 181

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 45/202 (22%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            L  + + P  +T  + D         IEK + +  LD+G+G+G +   L K   F   V
Sbjct: 7   FLRDEEYSPAEDTFFIAD--------YIEKENGLTALDVGSGSGYLTKLLAKNFIF--VV 56

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           G DI+   L         N      + +  +   +++  FD++V N PY+ +        
Sbjct: 57  GTDINFIVL--------KNQTYSTKNLVCCNGSDALKSEFDLVVCNLPYLATDQ------ 102

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----------EIGYNQKVDV 235
            V D     + DGGIDG    + I D + +++   G               + Y QK+ +
Sbjct: 103 -VLD----ATTDGGIDGFEIPKKIFDSIYKNIKVGGKFLFVTSSLSDYQKLMDYAQKLGL 157

Query: 236 -VRIFESRKLF-----LVNAFK 251
             +I   +KLF     LV A K
Sbjct: 158 NPKILAKKKLFFEELILVEAIK 179


>gi|323136701|ref|ZP_08071782.1| methyltransferase small [Methylocystis sp. ATCC 49242]
 gi|322398018|gb|EFY00539.1| methyltransferase small [Methylocystis sp. ATCC 49242]
          Length = 245

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 8/89 (8%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
              +   ILD+G G GAV L     +P      V+I   A  +A+ N   NG+++R    
Sbjct: 36  PPGETGLILDVGAGAGAVGLMAAVRAPGAAIGLVEIDPGAAALARENVAANGLADRVSVF 95

Query: 154 QSDWFSS--------VEGLFDVIVSNPPY 174
           ++D  +          +    ++++NPP+
Sbjct: 96  EADVTAPGARRAAGLSDEKAALVLTNPPF 124


>gi|282878591|ref|ZP_06287369.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC
           35310]
 gi|281299291|gb|EFA91682.1| ribosomal protein L11 methyltransferase [Prevotella buccalis ATCC
           35310]
          Length = 287

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD G GTG + +A LK       VG DI   ++E  + NA  N V +  +    D
Sbjct: 149 KGKRVLDSGCGTGILGIAALKLGAEA-VVGFDIDEWSVENTQHNAAINEV-DNIEVFHGD 206

Query: 157 --WFSSVEGLFDVIVSN 171
               S V G+FDV+++N
Sbjct: 207 AHVLSHVSGVFDVVLAN 223


>gi|195377591|ref|XP_002047572.1| GJ13518 [Drosophila virilis]
 gi|194154730|gb|EDW69914.1| GJ13518 [Drosophila virilis]
          Length = 603

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 28/174 (16%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRSLKHE---SIHRILGWRDF----YNVRLTLSSDTF-- 72
               P+     +        +      +    +  + G          ++  +S   F  
Sbjct: 329 FYEQPEQNNTHKCTSLYYQDVKHREAGQMVNPVTHLSGSTHITDTIQGLQFRVSPLAFFQ 388

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
                  +L   A+  + P  +      +LD+  GTG + LA  K     + +GV+I   
Sbjct: 389 INTAGANVLYQQAIDLAAPSRD----TTMLDICCGTGTIALAFAKHCK--QVLGVEIVPD 442

Query: 133 ALEIAKSNAVTNGVSE-RF------DTLQSDWFSSVEGL-----FDVI-VSNPP 173
           A++ A+ NA  N +   +F      D ++S    ++ G       D+I V +PP
Sbjct: 443 AIKDAEYNAQENDIKNCKFFAGNADDFIKSMVREALYGQEPGKPVDLIAVVDPP 496


>gi|167618631|ref|ZP_02387262.1| ribosomal protein L11 methyltransferase [Burkholderia thailandensis
           Bt4]
          Length = 300

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGNVTGIDIDPQAVEAARQNSEHN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D           G FD++V+N
Sbjct: 212 ---RADVTYGLPDDCPAGEFDIVVAN 234


>gi|320165373|gb|EFW42272.1| hypothetical protein CAOG_07657 [Capsaspora owczarzaki ATCC 30864]
          Length = 349

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 48/147 (32%), Gaps = 28/147 (19%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL  +L   E  +    LDL  G GA  + L KE    K  G+DI  KA+  AK  A  +
Sbjct: 48  ALELNLADSEGAEGKHYLDLCCGEGASAIQLAKEY-NCKITGIDIVEKAINRAKEQAKAD 106

Query: 145 GVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            V      +  + F     +G FD I    P       D L  + R              
Sbjct: 107 KVEHLVTFVACNAFQLPFADGSFDAIFGQDP-------DALSHQDRVH------------ 147

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGY 229
                 I     R L  +G       +
Sbjct: 148 ------IFRECLRVLKPNGRFVFFHHW 168


>gi|222617909|gb|EEE54041.1| hypothetical protein OsJ_00721 [Oryza sativa Japonica Group]
          Length = 558

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      ILDL  GTG + L L + + 
Sbjct: 367 RGLTFQISANSFFQTNTKQADVLYKLIGESAGLKGDGSEIILDLFCGTGTIGLTLARRAK 426

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  AK NA  NG+S     +Q D       F       D+I+S+P
Sbjct: 427 --HVYGYEVVPEAIADAKKNAKLNGIS-NATFVQGDLNKINETFGKEFPKPDIIISDP 481


>gi|119510216|ref|ZP_01629354.1| hypothetical protein N9414_10538 [Nodularia spumigena CCY9414]
 gi|119465166|gb|EAW46065.1| hypothetical protein N9414_10538 [Nodularia spumigena CCY9414]
          Length = 440

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L  S  T   +     LV +A      ++       ILD G G+G   L L + +P  
Sbjct: 24  IPLEKSPKTQPKQLYIHSLV-NAYYLRNQKVIDSPGKVILDAGCGSGYKSLMLAEANPGA 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVS 170
           K  GVDIS +++++A+      G+    F  L  +    +   FD I  
Sbjct: 83  KIFGVDISAESVKLARQRLEYYGLDNAEFHVLSLEDLPKLNQKFDYINC 131


>gi|307705459|ref|ZP_07642314.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK597]
 gi|307620994|gb|EFO00076.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK597]
          Length = 316

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILVHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|189424062|ref|YP_001951239.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ]
 gi|226710087|sp|B3E5Z5|PRMA_GEOLS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|189420321|gb|ACD94719.1| ribosomal protein L11 methyltransferase [Geobacter lovleyi SZ]
          Length = 305

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
           P  E+ + ++ILDLGTG+G + +A  K     +   VDI  +A+ +A+ N   N V++R 
Sbjct: 162 PPPEQLEQIKILDLGTGSGILAIAAAK-LGALQIDAVDIDPQAVIVAEENCALNKVADRI 220

Query: 151 DTLQSDWFSSVEGLFDVIVSN 171
               +     +   + +I++N
Sbjct: 221 SCSTTPL-EQLGDGYRIILAN 240


>gi|330873247|gb|EGH07396.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 332

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLEAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLKKARQHLKSGGEL 294


>gi|298491945|ref|YP_003722122.1| type 11 methyltransferase ['Nostoc azollae' 0708]
 gi|298233863|gb|ADI64999.1| Methyltransferase type 11 ['Nostoc azollae' 0708]
          Length = 395

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  ++  VRILD G G+G     L+  +P  + VG+D+S   LE+AK    +
Sbjct: 40  AAYNFCTGRKPQKQDVRILDAGCGSGVSTEYLVHLNPHAQIVGIDLSAGTLEVAKKRCQS 99

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--G 199
           +G ++R +      +    + G FD+I          ++  L   VR      +L     
Sbjct: 100 SG-ADRVEFHHLSIYDVEQIPGKFDLINCV------GVLHHLPDPVRGI---QALAKKLA 149

Query: 200 IDGLSHY 206
            DGL H 
Sbjct: 150 TDGLMHI 156


>gi|195150571|ref|XP_002016224.1| GL10611 [Drosophila persimilis]
 gi|194110071|gb|EDW32114.1| GL10611 [Drosophila persimilis]
          Length = 300

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 36/195 (18%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           ++++ + +  +  +  P    R    L ++  L          + VR +D+G G+  +  
Sbjct: 59  KEYFKLDVDFAPGSLVPTLALRLNYILWLEDMLLPL-----NLETVRGIDVGCGSSCIYS 113

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWF------SSVEG 163
            L  +   +  + ++   + ++ A+ N   N + E  +      +S+ F        +  
Sbjct: 114 LLGAKKNGWNMLALESKEENIDYARKNVRRNNLEELIEVYAQPDKSNIFKSYFETEKLRK 173

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD-------------GGIDGLSHYRTIA 210
            F   + NPP+ +S   +  G   R+   R + +             GG   +   + I 
Sbjct: 174 EFHFCLCNPPFFDSNSPNPFGGNTRNPQRRPAPNNVRTGSAEELTCEGGE--VHFVQRII 231

Query: 211 DGVSRHLNKDGLCSV 225
           +     LNK  +   
Sbjct: 232 EESQ--LNKQRVLIF 244


>gi|118587631|ref|ZP_01545041.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata
           IAM 12614]
 gi|118439253|gb|EAV45884.1| ribosomal RNA small subunit methyltransferase C [Stappia aggregata
           IAM 12614]
          Length = 352

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 38/204 (18%)

Query: 67  LSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +    F  RP       +D A      ++      R  DLG G G +  A+ +++P  K 
Sbjct: 166 VLDGAFVSRPGVFAWDRIDPASRLLADQLPATLKGRGADLGAGFGYLTRAVFEKAP--KV 223

Query: 125 VGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             +D+      AL++A+ N          + + SD    +EG +D +VSNPP+       
Sbjct: 224 TSMDLFEAEKRALDLAEQNLAAFKGLRTMNGIWSDVTQGIEGPYDFVVSNPPF------- 276

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--------EI--GYNQ 231
                        +  G  D     +      +R L   G   +        E   G   
Sbjct: 277 -----------HQA--GKADRADVGQGFIRSAARGLRPGGEFFMVANRHLPYEHTLGEVF 323

Query: 232 KVDVVRIFESRKLFLVNAFKDYGG 255
             DV ++ +     ++ A K  GG
Sbjct: 324 A-DVKQLADEGGYKVIRAVKRQGG 346


>gi|294782904|ref|ZP_06748230.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA]
 gi|294481545|gb|EFG29320.1| N-6 adenine-specific DNA methylase [Fusobacterium sp. 1_1_41FAA]
          Length = 243

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 30/199 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +            ++  +ILD+GTG   + L L K +  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVNLT-------KNTKKILDIGTGNAVIPLFLSKRT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I   + ++A  N   N ++E+   +  +  + ++    G FD+++SNPP+ + 
Sbjct: 67  AKIYGVEIQEISYQLALRNININNLNEQIYIIYDNIKNYLKYFTIGSFDIVLSNPPFFKV 126

Query: 178 VIVDCL-----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                L      L +   +  ++LD           + +  S+ +   G   +     + 
Sbjct: 127 TENKELLNDLEQLSIARHEIELNLD----------ELIEISSKLVKDRGYFYLVH---RA 173

Query: 233 VDVVRIFESRKLFLVNAFK 251
             +  I  + + +   A K
Sbjct: 174 DRLSEILVTLQKYNFEAKK 192


>gi|212528970|ref|XP_002144642.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
 gi|210074040|gb|EEA28127.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
          Length = 256

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 38/193 (19%)

Query: 71  TFEPRPETELLVD--------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +EP  ++ LL+D        + L       E      ++++G+G+G V       S   
Sbjct: 15  VYEPAEDSFLLLDTLSSASEAAWLTDRFQTSESSSSPLVVEVGSGSGVVIAFTAANSKHI 74

Query: 123 KG------VGVDISCKALEIAKSNAV-------TNGVSERFDTLQSDWFSSVE-GLFDVI 168
            G      + VD++ +A +  +               +    +L  D  S ++ G  DV+
Sbjct: 75  FGREDILSLAVDVNREACQATEQTVKTAIAETGNANSTHYLSSLTGDLVSPLKPGSVDVL 134

Query: 169 VSNPPYIESVIVDCLGLEVRD----------FDPRISL-----DGGIDGLSHYRTIADGV 213
           + NPPY+ +  +  L    ++          F+    L      GG+DG+       + +
Sbjct: 135 LFNPPYVPTPDLPVLPQPGQNETKPLSRSEKFEHDSYLLSLSYAGGVDGMETTNRFIEAI 194

Query: 214 SRHLNKD-GLCSV 225
              L+ + G+  +
Sbjct: 195 PSVLSPERGVAYL 207


>gi|239628807|ref|ZP_04671838.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518953|gb|EEQ58819.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 499

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 25/171 (14%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++AL  +L +   ++  ++LD   G G + +   K        G+DI   A+  A+ NA
Sbjct: 334 VNAALTAALAKEYMKEDAQVLDPFCGVGTMLIERHKAVRANTSYGIDIQEDAILKARENA 393

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                 +    +  D+F  + + LFD +++N P+    + D    EV             
Sbjct: 394 EA--ARQVIHFINRDFFQFTHDYLFDEVITNMPFKIGRLTDD---EV------------- 435

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF 250
                Y+     +   L K  +  +   Y   + DVV++       ++ + 
Sbjct: 436 --YDIYKRFFQIIPDFLKKGSVLIL---YTHNREDVVQLTFRTGFSIMKSH 481


>gi|90413177|ref|ZP_01221173.1| hypothetical O-methyltransferase [Photobacterium profundum 3TCK]
 gi|90325868|gb|EAS42320.1| hypothetical O-methyltransferase [Photobacterium profundum 3TCK]
          Length = 240

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 61/169 (36%), Gaps = 17/169 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF--KGVGVDISCKALEIAKSN 140
           D  L  +   + K    +++D+GTG+G + L + +           +++   A + A  N
Sbjct: 24  DGVLLGAWATLPKHG--KLIDIGTGSGLLALMMAQRIAPALCSITAIELDNSAADAATKN 81

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
              +  S     ++ D    +        + I+ NPPY    +               + 
Sbjct: 82  FSNSPWSSSLHCVKQDIQRWIHTQPKNNIENIICNPPYFNFGLQADNQT--------RAT 133

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
               D L+H   +   ++  L   G+ S+ +   +  ++++  E   L 
Sbjct: 134 ARHTDTLTH-DVLLQSITYLLAPTGIVSLILPEYEGREIIQAAEKYGLH 181


>gi|17552558|ref|NP_497990.1| hypothetical protein C38D4.9 [Caenorhabditis elegans]
 gi|3874828|emb|CAA86320.1| C. elegans protein C38D4.9, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 214

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +  L  S +      I   +  +++D+G G G +             +GVDI  +AL+I 
Sbjct: 29  SSELAVSMMEMIDETI-GFEGKKLIDIGCGCGMLMTTAATMYELETVLGVDIDDEALKIC 87

Query: 138 KSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPY 174
             N  T  V +R + LQ+D          G FDV V NPP+
Sbjct: 88  SRNLETAEVQDRCELLQADILDPESDLPRGTFDVAVINPPF 128


>gi|315445569|ref|YP_004078448.1| methyltransferase family protein [Mycobacterium sp. Spyr1]
 gi|315263872|gb|ADU00614.1| methyltransferase family protein [Mycobacterium sp. Spyr1]
          Length = 502

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 21/187 (11%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L +  A       + +  V R LDLGTG G   L L  E+   + V  D + +AL
Sbjct: 138 RRDHVLGIGGASVSLAHAVVRDPVGRALDLGTGCGIQALHL--EAHCDEIVATDTNPRAL 195

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A + A  NG+S  +D      F  V G  FD+IVSNPP++  V    L    R     
Sbjct: 196 ALAAATARLNGMS--WDLRCGSMFEPVAGERFDLIVSNPPFV--VGTGSLDYIYR----- 246

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY------NQKVDVVRIFESRKLFLV 247
              D G+ G    + +   V  HL   G   +   +      N +  V        L   
Sbjct: 247 ---DSGMAGDGLCQNLIAQVRDHLRPGGTAQIMANWIVRDPQNWQERVHGWLADTGLHAW 303

Query: 248 NAFKDYG 254
              +++ 
Sbjct: 304 VVQREFA 310


>gi|167564152|ref|ZP_02357068.1| ribosomal protein L11 methyltransferase [Burkholderia oklahomensis
           EO147]
          Length = 300

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A  N+  N 
Sbjct: 154 LCMEWLEQTVQPGQTVLDYGCGSGILAI-LAKKCGAGSVTGIDIDPQAVEAACQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D          +G FD++V+N
Sbjct: 212 ---RADVAYGLPDDCPDGEFDIVVAN 234


>gi|319936769|ref|ZP_08011181.1| methyltransferase [Coprobacillus sp. 29_1]
 gi|319808037|gb|EFW04609.1| methyltransferase [Coprobacillus sp. 29_1]
          Length = 400

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 22/132 (16%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  + TG   L         +   VD+S  AL  A  NA  N +  +   ++ D
Sbjct: 227 HGKKVLDCFSHTGGFALN-AAYGKAKEVHAVDVSQTALNQAYENAKLNHLENKMRFIKDD 285

Query: 157 WFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            F  ++    G +D+IV +PP                   R ++D   +G   Y+ I   
Sbjct: 286 VFDYLDKCKVGQYDIIVLDPPAFTKS--------------RRTIDHAYNG---YKKINMK 328

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 329 AIKLLGRGGYLI 340


>gi|298485717|ref|ZP_07003796.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298159743|gb|EFI00785.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320325729|gb|EFW81790.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327352|gb|EFW83366.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330988565|gb|EGH86668.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331008904|gb|EGH88960.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 332

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|70726339|ref|YP_253253.1| ribosomal protein L11 methyltransferase [Staphylococcus
           haemolyticus JCSC1435]
 gi|82581519|sp|Q4L6S8|PRMA_STAHJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|68447063|dbj|BAE04647.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 11/112 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  +   +
Sbjct: 177 VIDVGTGSGILSIA-SHLLGVKRIKALDIDELAVNVAKENFAKNHCEDAIEAVPGNLLKN 235

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               FD++++N   I + I++ +  +  +     +L+   DG      I + 
Sbjct: 236 ETEKFDIVIAN---ILAHIIEDMIEDAYN-----TLN--KDGYFITSGIIEE 277


>gi|326693042|ref|ZP_08230047.1| ribosomal protein L11 methyltransferase [Leuconostoc argentinum
           KCTC 3773]
          Length = 292

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 44/201 (21%)

Query: 57  WRDFYNVRLTLSSDTFEPR-------PETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           W  F   +        +P+        ET  L+  AL   +     R    ++D+GTG+G
Sbjct: 109 WEPFEPQQADEKPIVMDPKLVFGTGTHETTQLMMQALETVV-----RGGESMIDVGTGSG 163

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVI 168
            + +A  ++      +  DI   A+ +AK N   N V+     + SD  + V     D+I
Sbjct: 164 VLAVA-ARQLGVGPILATDIDDMAVAVAKENLALNPVAADIPVVASDLLADVTVAPVDLI 222

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EI 227
           V+N                      ++             +       L  +G   V  I
Sbjct: 223 VAN---------------------ILA--------DVITRLIPQTIALLKPNGYFLVSGI 253

Query: 228 GYNQKVDVVRIFESRKLFLVN 248
                 ++ +   +    +V 
Sbjct: 254 YDAIAPEIEQQLVAHGYHVVQ 274


>gi|258539802|ref|YP_003174301.1| methyltransferase [Lactobacillus rhamnosus Lc 705]
 gi|257151478|emb|CAR90450.1| Methyltransferase [Lactobacillus rhamnosus Lc 705]
          Length = 241

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 20/188 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++++  S   F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 12  RHIKIIQSGAVFSFSLDAVLLANFA--------QIKRHSRVVDLAAGNGAVGLFLARKTD 63

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++A+ +   N ++   D  + D   +     +   DV+  NPPY +
Sbjct: 64  N-RVTMVELQPRLADMARRSVALNALA-NVDVHEGDLADTTKFVAKDSVDVVTCNPPYFK 121

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            +++           T+A   +  L   G        ++  +++
Sbjct: 122 ISARSITNPN-----DHLAIARHELTTDFA-TVARVSADLLKYQGKAYFVHRPDRLAELL 175

Query: 237 RIFESRKL 244
               +  L
Sbjct: 176 ATLTAVGL 183


>gi|3183977|emb|CAA39515.1| protein Htf9C [Mus musculus]
          Length = 677

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G +    D   +   +S   F    +        L   +    +      +
Sbjct: 434 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 490

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 491 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 547

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 548 PGLVSRLSSH 557


>gi|331005141|ref|ZP_08328542.1| putative ribosomal RNA small subunit methyltransferase [gamma
           proteobacterium IMCC1989]
 gi|330421060|gb|EGG95325.1| putative ribosomal RNA small subunit methyltransferase [gamma
           proteobacterium IMCC1989]
          Length = 366

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 33/176 (18%)

Query: 62  NVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++++      F   +    +ELL++S  A    R        ILDLG G G +   L   
Sbjct: 185 HLKVYTKPGVFGWNKIDIGSELLLESLPAILQER--DITPKNILDLGCGYGWIFFNLPYY 242

Query: 119 SP-----FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
            P            D +  AL  AK N+ +  +      +  D   +++  FD+I+ NPP
Sbjct: 243 LPTENLQKISVTATDNNATALLCAKKNSASLSLPT--SIIPDDCAQNIDEKFDLILCNPP 300

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
           + +                          L+      +   RHL   G+    +  
Sbjct: 301 FHQG-------------------FSHDKTLTV--KFLEQTKRHLTHKGIAVFVVNE 335


>gi|295687569|ref|YP_003591262.1| cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis
           ATCC 21756]
 gi|295429472|gb|ADG08644.1| Cyclopropane-fatty-acyl-phospholipid synthase [Caulobacter segnis
           ATCC 21756]
          Length = 393

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 5/116 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL--PRIEKRDVVRILDLGTGTGAVCLA 114
           +R F +  +  S   FE RP+  L    A   +L   ++  +  ++ LD+G+G G + + 
Sbjct: 126 YRRFLDADMQYSCAYFE-RPDMTLEEAQAAKKALIGRKLLIQPGMKTLDIGSGWGGLSMT 184

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L K+    +  GV +S + L +AK  A T G+ +R D   +D +  +   FD IVS
Sbjct: 185 LAKDF-GARMTGVTLSTEQLALAKERAETAGLGDRIDFRLTD-YRDLNEPFDRIVS 238


>gi|300910005|ref|ZP_07127465.1| methyltransferase [Lactobacillus reuteri SD2112]
 gi|300892653|gb|EFK86013.1| methyltransferase [Lactobacillus reuteri SD2112]
          Length = 251

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  +   F         +D+ L  +  R   R  ++I+DL  G GA+ + L  +   
Sbjct: 20  DVRIIQNPHYFAFS------LDAVLLANFVRPNHRQKLKIVDLCAGNGAIGIFLHDKLSG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                V++  +  ++A+   + N + +R+  +  D  +  +       D+++ NPPY  
Sbjct: 74  -TFTEVELQPQIADMAERTILLNDLQDRYTVINDDIANVNDYISKDSIDIVLCNPPYFP 131


>gi|149192073|ref|ZP_01870298.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio shilonii AK1]
 gi|148834098|gb|EDL51110.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio shilonii AK1]
          Length = 437

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 18/133 (13%)

Query: 51  IHRILGWRDFYN-----VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +  I G + +Y+     +    +      R     +V  AL +  P         +LDL 
Sbjct: 245 LQLITGEQPYYSEVGVELPFLPTHFIQVNREINSKMVAQALEWLAPESSDN----VLDLF 300

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---- 161
            G G   L L K     + VGV+     ++ A+ NA  N ++   +  Q++    +    
Sbjct: 301 CGLGNFTLPLAKLCQ--RVVGVEGIQDMVDWAQQNAALNHLT-NVEFYQANLEQDLSEMS 357

Query: 162 --EGLFDVIVSNP 172
             +  FD I+ +P
Sbjct: 358 WAKQQFDKILLDP 370


>gi|322392664|ref|ZP_08066124.1| ribosomal protein L11 methyltransferase [Streptococcus peroris ATCC
           700780]
 gi|321144656|gb|EFX40057.1| ribosomal protein L11 methyltransferase [Streptococcus peroris ATCC
           700780]
          Length = 317

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWNMVRESAEAAGFFL 291


>gi|108762169|ref|YP_629399.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK
           1622]
 gi|123248086|sp|Q1DD74|PRMA_MYXXD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|108466049|gb|ABF91234.1| ribosomal protein L11 methyltransferase [Myxococcus xanthus DK
           1622]
          Length = 288

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     + +     +LD+GTGTG + +A  K+    + V  D    ++E+A+ N   NG
Sbjct: 145 LAAVDAYMAEHPGAAVLDVGTGTGVLAIA-AKKLGAGRTVATDNDPISVELAQENQAENG 203

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             +  +       + VEG FD++++N   + + +++   L V     R+ L G    LSH
Sbjct: 204 TPD-IEV-SGKELTQVEGTFDLVLAN--ILANTLIELAPLIVAKTKDRLVLAGV---LSH 256

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
            R   +   R+L   GL  +  G  Q   V 
Sbjct: 257 QRADVEAAYRNL---GLTVL-TGATQGEWVR 283


>gi|71278309|ref|YP_268128.1| cyclopropane-fatty-acyl-phospholipid synthase [Colwellia
           psychrerythraea 34H]
 gi|71144049|gb|AAZ24522.1| cyclopropane-fatty-acyl-phospholipid synthase [Colwellia
           psychrerythraea 34H]
          Length = 385

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 36/181 (19%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  + P  +  L  D A    LA    R+   +   +L++
Sbjct: 120 HYDLGNELYTRFLDPDMMYSSAIY-PTEDASL--DEAQQHKLATICQRLSLNEHDHLLEI 176

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG G + +   +     +     IS      A++     G++++   L+ D + ++ G+
Sbjct: 177 GTGWGGLAIYAAQHY-GCRVTTTTISDAQYAYAQARIEKLGLTDKITLLKED-YRNLTGV 234

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS            +   V              G     +     +  L   G   
Sbjct: 235 FDKVVS----------IEMIEAV--------------GYDFLPSFFKQCNDRLKVGGKLL 270

Query: 225 V 225
           +
Sbjct: 271 I 271


>gi|82751181|ref|YP_416922.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           RF122]
 gi|123547851|sp|Q2YT49|PRMA_STAAB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|82656712|emb|CAI81139.1| probable methyltransferase [Staphylococcus aureus RF122]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIEDAYN 261


>gi|226356404|ref|YP_002786144.1| rRNA (guanine-N(2)-)-methyltransferase [Deinococcus deserti VCD115]
 gi|226318394|gb|ACO46390.1| putative rRNA (guanine-N(2)-)-methyltransferase [Deinococcus
           deserti VCD115]
          Length = 402

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 69/216 (31%), Gaps = 56/216 (25%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y V++      F   +P   T L++D  +   L          +LDLG GTG +      
Sbjct: 229 YGVKVVGLPGVFSAAKPDKATTLMLDHLVDLQLQ------GRTVLDLGCGTGLIGAWAAL 282

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIE 176
                    VD    ++  A++  V +G+    + + SD  + +    FDVI++NPP+  
Sbjct: 283 R--GAHVTLVDGDLLSVRSAQATLVASGLGG--EVVHSDVDAELGDRTFDVILTNPPFHV 338

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---E-IGYNQK 232
              V                      L   R      SR LN  G   +   E + Y Q 
Sbjct: 339 GRGVV---------------------LDVAREFIAAASRRLNPGGALYLVANEPLPYEQA 377

Query: 233 ----VDVVRIFESRKLFLVNAFKDYGGNDRVLLFCR 264
                    +  +                 VLL  R
Sbjct: 378 MQAVGQTRELIRAGGFK-------------VLLATR 400


>gi|332652543|ref|ZP_08418288.1| ribosomal protein L11 methyltransferase [Ruminococcaceae bacterium
           D16]
 gi|332517689|gb|EGJ47292.1| ribosomal protein L11 methyltransferase [Ruminococcaceae bacterium
           D16]
          Length = 323

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 59/152 (38%), Gaps = 40/152 (26%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           +LDLG G+G + +A          + VDI  KA+++A  NA  NG+  +R+     D  S
Sbjct: 182 VLDLGCGSGILSIA-ALVLGASHALAVDIDPKAVDVAYENAALNGIGKDRYTVRAGDVLS 240

Query: 160 S-------VEGLFDVIVSNPPYIESVIVDCLGLEV------------------RDFDPRI 194
                    +  + ++++N   I + ++  L  +V                  R  +   
Sbjct: 241 DAALAAEIAQQRYPLVLAN---IVADVIIPLSAQVPNLLTEDGIFLCSGIIDTRAHEVEA 297

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +L    +GL   R           K+G  ++E
Sbjct: 298 ALA--KNGLKVTRKR--------EKNGWVALE 319


>gi|309799317|ref|ZP_07693563.1| ribosomal protein L11 methyltransferase [Streptococcus infantis
           SK1302]
 gi|308117057|gb|EFO54487.1| ribosomal protein L11 methyltransferase [Streptococcus infantis
           SK1302]
          Length = 317

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWNMVRESAEAAGFFL 291


>gi|119510215|ref|ZP_01629353.1| hypothetical protein N9414_10533 [Nodularia spumigena CCY9414]
 gi|119465165|gb|EAW46064.1| hypothetical protein N9414_10533 [Nodularia spumigena CCY9414]
          Length = 441

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           ILD G G+G   L L + +P  K VG DIS +++++A+     +G     F  L  +   
Sbjct: 61  ILDAGCGSGYKSLMLAEANPGAKIVGFDISPESVKLARERLDYHGFDNAEFHVLALEELP 120

Query: 160 SVEGLFDVIVS 170
           S+   FD I  
Sbjct: 121 SLNQQFDYINC 131


>gi|20807963|ref|NP_623134.1| SAM-dependent methyltransferase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516535|gb|AAM24738.1| predicted SAM-dependent methyltransferases [Thermoanaerobacter
           tengcongensis MB4]
          Length = 391

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  + TG+  +         +   VDIS +ALE+AK N   NG  +R + ++ +
Sbjct: 216 KGAEVLDCFSHTGSFAVH-ALHYGAKRVEIVDISEEALEMAKKNVELNGYQQRAEFIREN 274

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +      +  FD ++ +PP             V+D     +L G       Y+ I 
Sbjct: 275 AFDLLRRYDREKKKFDTVILDPPAFTKSK-----ETVKD-----ALRG-------YKEIN 317

Query: 211 DGVSRHLNKDGLCS 224
               + + + G   
Sbjct: 318 LRALKIIREGGFLI 331


>gi|332715471|ref|YP_004442937.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
           H13-3]
 gi|325062156|gb|ADY65846.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium sp.
           H13-3]
          Length = 410

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 26/154 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   + +++      +L++G G GA+ + L  ++      G+ +S   L  AK+ A    
Sbjct: 183 LNRIVDKLQLSGGESVLEIGCGWGALAIHLATQA-DANVTGLTLSPSQLNWAKAAAEKTD 241

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN-----------PPYIESVIVDCLGL-----EVRD 189
            +E  D    D +  VEG FD IVS            P Y E++            ++  
Sbjct: 242 KAEHIDLRLED-YRDVEGKFDRIVSVEMFEAVGEAYWPSYFETLKRCLKPGGRAVLQIIS 300

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            +P            +YR  AD + +++   G  
Sbjct: 301 IEPAR--------FDNYRRNADFIQKYIFPGGFL 326


>gi|262037579|ref|ZP_06011035.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii
           F0264]
 gi|261748401|gb|EEY35784.1| ribosomal protein L11 methyltransferase [Leptotrichia goodfellowii
           F0264]
          Length = 310

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 27/155 (17%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELL-VDSALAFSLPRIE------------KR 96
           W+ +++       + +  S D +EP    +++ +D  +AF     E              
Sbjct: 109 WKKYFHTAKITENIVIKPSWDEYEPVGNEKIIEIDPGMAFGTGTHETTSLCVEFLEKYSG 168

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  ++LD+G G+G + L + K+    K  G+DI  K  E+ K N   N + E F+ +  +
Sbjct: 169 NKDKLLDIGCGSGILML-IGKKLGINKVTGIDIDEKVGEVVKENFAKNDIHENFEVIIGN 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
             + +   +D+IVSN      ++VD L   ++D +
Sbjct: 228 LVNDINEKYDIIVSN------ILVDVLTELLKDIE 256


>gi|154251180|ref|YP_001412004.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1]
 gi|154155130|gb|ABS62347.1| O-methyltransferase [Parvibaculum lavamentivorans DS-1]
          Length = 260

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 22/177 (12%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL +     +P       +D+ L      +  R+  R L+ G G G   L L    
Sbjct: 15  FLGGRLKM----LQPEKGYRAGLDAVL--LAASVPAREGERALEAGAGVGVASLCLASRV 68

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVS 170
              +  G+++  +   +A  N   NG++ER   +  D    V  L         +  + +
Sbjct: 69  SGLEVAGIELQPELARLASENIARNGLAERVSIVTGDIGHPVRNLAAMGLEPNGWHHVFA 128

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           NPP+ +         +       ++L  G D     R             G  +   
Sbjct: 129 NPPFHDPATSPA-PPDASKAQAHLTL--GSDLDDWVR----FACVMAKPKGTVTFIH 178


>gi|170723588|ref|YP_001751276.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida W619]
 gi|226712967|sp|B1JEN3|RSMC_PSEPW RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|169761591|gb|ACA74907.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida W619]
          Length = 331

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++   V  +LD G G G +   + +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDNLPVGHVLDFGCGAGVLGATVKRRYPQSRVTMLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            N +    + +  D   +  G   +I+SNPP+   V  +    E                
Sbjct: 237 ANKLEG--EVISGDGIDAAPGDLSLILSNPPFHTGVHTNYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDG 221
                 +     +HL K G
Sbjct: 279 -----NLLKKSGQHLRKGG 292


>gi|329725394|gb|EGG61877.1| ribosomal protein L11 methyltransferase [Staphylococcus epidermidis
           VCU144]
          Length = 312

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  
Sbjct: 172 KPTDSVIDVGTGSGILSIA-SHLLGVQRIKALDIDEMAVNVAKENFKKNLCDDAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +   +    F+++++N   I + I++ +  +  +     +L    DG      I +   +
Sbjct: 231 NLLKNENEKFNIVIAN---ILAHIIEEMIEDTYN-----TLI--EDGYFITSGIIEE--K 278

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
           +                 D+    +     +++   D
Sbjct: 279 Y----------------QDIESQMKRIGFKIISVEHD 299


>gi|227544964|ref|ZP_03975013.1| methyltransferase [Lactobacillus reuteri CF48-3A]
 gi|227185075|gb|EEI65146.1| methyltransferase [Lactobacillus reuteri CF48-3A]
          Length = 255

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  +   F         +D+ L  +  R   R  ++I+DL  G GA+ + L  +   
Sbjct: 24  DVRIIQNPHYFAFS------LDAVLLANFVRPNHRQKLKIVDLCAGNGAIGIFLHDKLSG 77

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                V++  +  ++A+   + N + +R+  +  D  +  +       D+++ NPPY  
Sbjct: 78  -TFTEVELQPQIADMAERTILLNDLQDRYTVINDDIANVNDYISKDSIDIVLCNPPYFP 135


>gi|56961837|ref|YP_173559.1| hypothetical protein ABC0055 [Bacillus clausii KSM-K16]
 gi|56908071|dbj|BAD62598.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 243

 Score = 62.4 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 35/222 (15%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
           L+ E + ++ G     N+ +  S  TF    +  LL   A              RILDL 
Sbjct: 3   LQGERLDKVAGS----NLSIIQSDQTFAYSIDAVLLGRFAYVPI-------QKGRILDLC 51

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL- 164
           +G G V L L           V++  +  ++A+     N + ++  +L  D   +   L 
Sbjct: 52  SGNGIVGLVL-SARTKALIDLVEVQARLHDMAERTIRVNQLEKQVTSLCFDVKDTKNNLA 110

Query: 165 ---FDVIVSNPPYI----ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH- 216
              +D +  NPPY        + +   L V   +           L+           + 
Sbjct: 111 HSSYDTVTCNPPYFQLGGNKQVKEQRALSVARHE-----------LACTLADVVQAGSYA 159

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
           L   G  ++     +   +  + E  +   +   +    + R
Sbjct: 160 LKYGGKLALVH---RPERLADMMEEMRKCNIEPKRLRFCHPR 198


>gi|306829962|ref|ZP_07463149.1| ribosomal protein L11 methyltransferase [Streptococcus mitis ATCC
           6249]
 gi|304427973|gb|EFM31066.1| ribosomal protein L11 methyltransferase [Streptococcus mitis ATCC
           6249]
          Length = 316

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|260168221|ref|ZP_05755032.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. F5/99]
 gi|261757682|ref|ZP_06001391.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. F5/99]
 gi|261737666|gb|EEY25662.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. F5/99]
          Length = 426

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 75/196 (38%), Gaps = 32/196 (16%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFE--PRPETELLVDSALA---FS 89
           RF   N I RS  +   H  L   +FY++ L            P    L ++ LA     
Sbjct: 108 RFQQMNTISRSSSNIKSHYDL-SGEFYDLFLDPDKQYSCAYFDPPNATLAEAQLAKKRHI 166

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             ++  ++  ++LD+G G G + L L +        GV +S +   IA   A   G+++R
Sbjct: 167 AAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEEQHAIANQRARDEGLADR 225

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                +D + ++   FD +VS                V  F+          G+ H+   
Sbjct: 226 AKFELTD-YRNINDKFDRLVS----------------VGMFE--------HVGVGHFAEY 260

Query: 210 ADGVSRHLNKDGLCSV 225
              V+R +  DG+  +
Sbjct: 261 FQHVARLMKPDGVFLL 276


>gi|227529095|ref|ZP_03959144.1| methyltransferase [Lactobacillus vaginalis ATCC 49540]
 gi|227350939|gb|EEJ41230.1| methyltransferase [Lactobacillus vaginalis ATCC 49540]
          Length = 253

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 11/122 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +V++  +   F    +  LL D        R  K+   +I+DL  G GA+ L L  +   
Sbjct: 20  DVQIIQNPHCFAFSLDAVLLADFV------RPNKKRQAKIVDLCAGNGAIGLFLHNKLGG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
                V++      +A+     N + ER+D L  D         +   D+++ NPPY  +
Sbjct: 74  -HFTEVELQKPIANMAERTIKLNHLEERYDVLNMDIKDIYNKIPKDSADIVLCNPPYFPN 132

Query: 178 VI 179
             
Sbjct: 133 NE 134


>gi|254479719|ref|ZP_05093009.1| Met-10+ like-protein [Carboxydibrachium pacificum DSM 12653]
 gi|214034348|gb|EEB75132.1| Met-10+ like-protein [Carboxydibrachium pacificum DSM 12653]
          Length = 393

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  + TG+  +         +   VDIS +ALE+AK N   NG  +R + ++ +
Sbjct: 218 KGAEVLDCFSHTGSFAVH-ALHYGAKRVEIVDISEEALEMAKKNVELNGYQQRAEFIREN 276

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +      +  FD ++ +PP             V+D     +L G       Y+ I 
Sbjct: 277 AFDLLRRYDREKKKFDTVILDPPAFTKSK-----ETVKD-----ALRG-------YKEIN 319

Query: 211 DGVSRHLNKDGLCS 224
               + + + G   
Sbjct: 320 LRALKIIREGGFLI 333


>gi|330961768|gb|EGH62028.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 332

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++K     +LD G G G +  A+ +  P  + + +D+   A   ++    
Sbjct: 177 DRGSALLLENLDKLPSGNLLDFGCGAGVLGAAVKRRYPHNEVILLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   +  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLDAQV--MTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLKKARQHLKSGGEL 294


>gi|325697804|gb|EGD39688.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK160]
          Length = 317

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    VE   DVIV+N
Sbjct: 228 GDLLRGVEIEADVIVAN 244


>gi|296118142|ref|ZP_06836723.1| pyridine nucleotide-disulfide oxidoreductase domain protein
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968700|gb|EFG81944.1| pyridine nucleotide-disulfide oxidoreductase domain protein
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 583

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 76/227 (33%), Gaps = 52/227 (22%)

Query: 47  KHESIHRIL-GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
            HE   ++  G+ +F  +   LSS        T   +D A +            RI++LG
Sbjct: 8   NHEPWEQLPSGFAEFLELEARLSSPV------TTTAIDLAASAL-----DSTPSRIVELG 56

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           +GTG   +AL +  P      VDIS + L+     A   GV ER    Q+D    ++   
Sbjct: 57  SGTGDNVIALAQRFPHADVHAVDISSELLDTVSVAATQAGVRERVRLHQADLNDELQE-- 114

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDF---DPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                N P      VD +   +      +P  +L                    L   G+
Sbjct: 115 -----NLP----TGVDLMWASLTLHHINNPAAAL--------------KSAFDALRPGGI 151

Query: 223 C-SVEI-GY-------NQKVDVVRIFES---RKLFLVNAFKDYGGND 257
              +E+ G         Q  +V     +         ++  DY G D
Sbjct: 152 LVVIEMTGESFFVPAGEQAHEVRHQASAPAIHHQVDWSSLLDYAGFD 198


>gi|148990496|ref|ZP_01821637.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP6-BS73]
 gi|147924254|gb|EDK75350.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           SP6-BS73]
          Length = 316

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|46447493|ref|YP_008858.1| hypothetical protein pc1859 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401134|emb|CAF24583.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 198

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 40/207 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G   + + RL    D    RP    L ++        IE+      LDL  G+GA+  
Sbjct: 10  ITGL--YRHKRLVTPKDDLT-RPTASRLREALFNICQNFIEE---AAFLDLFAGSGAIGF 63

Query: 114 -ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFD 166
            AL + +       +D S +AL+  + NA   GV ++   L  + F+ +E        F+
Sbjct: 64  EALSRGAKSA--TFIDSSKEALKCQQKNASLLGVEQQCQLLYGEVFTLLEYLKKQQKRFN 121

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV--SRHLNKDGLCS 224
           +I ++PPY           +V   +P  S             I   +  S  L + G   
Sbjct: 122 IIFADPPY---------AKQVYANEPSYS-----------EKIIRCIDTSDLLAEKGTLF 161

Query: 225 VEIGYNQKVDVVRIFESRKLFLVNAFK 251
           +E        +  +   +KL L+N+ K
Sbjct: 162 IEEDSRFSPQLNDL---KKLQLINSRK 185


>gi|305666214|ref|YP_003862501.1| hypothetical protein FB2170_08054 [Maribacter sp. HTCC2170]
 gi|88708205|gb|EAR00442.1| hypothetical protein FB2170_08054 [Maribacter sp. HTCC2170]
          Length = 211

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 54/181 (29%), Gaps = 55/181 (30%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                IL+LG G G V   +L + P     G D++ K L +AK N         F  L  
Sbjct: 40  PQNANILELGCGPGNVTQYVLNKRPDLHITGTDLASKMLALAKKN----NPDAEFFKLDC 95

Query: 156 DWFSSVEGLFDVIV--SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
              +++   FD IV     PY+       L                         I D  
Sbjct: 96  REITTLNQKFDAIVGAFVMPYLNLEESAKL-------------------------ILDCA 130

Query: 214 SRHLNKDGLCS------------VE-----------IGYNQKVDVVRIFESRKLFLVNAF 250
           S  LN +G                E           I Y+Q   + +  +     +V+  
Sbjct: 131 S-LLNSNGTLFISTMEGDYNQSGFENTTFSGDDKVYIHYHQAAAIKQNLKRNGFEIVHFI 189

Query: 251 K 251
           K
Sbjct: 190 K 190


>gi|322388770|ref|ZP_08062367.1| ribosomal protein L11 methyltransferase [Streptococcus infantis
           ATCC 700779]
 gi|321140389|gb|EFX35897.1| ribosomal protein L11 methyltransferase [Streptococcus infantis
           ATCC 700779]
          Length = 317

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVAPG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWNMVRESAEAAGFFL 291


>gi|153951820|ref|YP_001398473.1| hypothetical protein JJD26997_1439 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939266|gb|ABS44007.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 233

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G V + L K     
Sbjct: 5   IMLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIVGILLKKNITNL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI-----ES 177
               +DI  + +E+ + N  +N +         + F SV+  FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIELIEKNLKSNQIQGDIFHDDFNQFQSVK-KFDFIVCNPPFYRQGACKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P  S                  +  L  +G    
Sbjct: 117 EDQHKTISKFQEFLPLYS-------------FLAKANSILKPNGTLYF 151


>gi|331090275|ref|ZP_08339162.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|330401894|gb|EGG81469.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 459

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  ++  +F  +P T+   +         I     + + DL +GTG
Sbjct: 268 LYGQDFFYEKLLGLQFKITPFSF-FQPNTK-GAEVLYETVREYIGDIRDLTVFDLFSGTG 325

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLF 165
            +   L    P  K  +GV+I  +A+E AK NA  NG+S   + +  D F     ++   
Sbjct: 326 TISQVLA---PVAKKVIGVEIVEEAVEAAKENAERNGLS-NCEFIAGDVFEVLDDIKEKP 381

Query: 166 DVIVSNPP 173
           DVI+ +PP
Sbjct: 382 DVIILDPP 389


>gi|322387142|ref|ZP_08060752.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC
           700779]
 gi|321141671|gb|EFX37166.1| hypothetical protein HMPREF9423_0150 [Streptococcus infantis ATCC
           700779]
          Length = 192

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 62/183 (33%), Gaps = 38/183 (20%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+ + L D   A    ++ +     ILD G GTG + L L K+S       VDI+ K LE
Sbjct: 15  PKNQFLADLVNAEIKQQVSELSTKSILDFGGGTGLIALPLAKQSK--SVTLVDIAEKMLE 72

Query: 136 IAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            A+     N   E    +Q D     +E  FD+I+ +               V    P  
Sbjct: 73  QARIKVE-NQKLENLHLIQQDLVLKPLEQTFDLIIVS--------------RVLHHMPHF 117

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-----IGYNQK---VDVVRIFESRKLFL 246
                  GL+ ++        HL   G   +       G N      ++    ++     
Sbjct: 118 -----DSGLAMFK-------EHLTLGGQLFIADYTVPDGENHGFIISELEETLKNHGFSD 165

Query: 247 VNA 249
           +  
Sbjct: 166 IQT 168


>gi|307267036|ref|ZP_07548551.1| Protein of unknown function methylase putative [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306917961|gb|EFN48220.1| Protein of unknown function methylase putative [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 391

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+EIAK N   NG  ER + +  + F
Sbjct: 218 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEIAKKNVELNGYQERCNFVCDNAF 276

Query: 159 SSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD ++ +PP             V+D     +L G       Y+ I   
Sbjct: 277 DLLRRYDKESRKFDTVILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 319

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 320 ALKILREGGFLI 331


>gi|301794755|emb|CBW37208.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           INV104]
          Length = 316

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|260892510|ref|YP_003238607.1| ribosomal protein L11 methyltransferase [Ammonifex degensii KC4]
 gi|260864651|gb|ACX51757.1| ribosomal protein L11 methyltransferase [Ammonifex degensii KC4]
          Length = 280

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 30/129 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +++ D+GTG+G + +A       +    +D    AL +A+ N   NGV++R   L+ 
Sbjct: 145 RPGMKVYDVGTGSGILAIAAALLGADW-IWAIDEDEVALRVARENVARNGVADRVQVLRG 203

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +     E   D+IV+N                        L            +    ++
Sbjct: 204 NLLEGKEEKADLIVAN------------------------LTA-----ELILQLLPQAAK 234

Query: 216 HLNKDGLCS 224
            L   GL  
Sbjct: 235 LLLPGGLLI 243


>gi|199597112|ref|ZP_03210544.1| Predicted O-methyltransferase [Lactobacillus rhamnosus HN001]
 gi|229552432|ref|ZP_04441157.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
 gi|199591916|gb|EDY99990.1| Predicted O-methyltransferase [Lactobacillus rhamnosus HN001]
 gi|229314169|gb|EEN80142.1| methyltransferase [Lactobacillus rhamnosus LMS2-1]
 gi|259649931|dbj|BAI42093.1| putative methyltransferase [Lactobacillus rhamnosus GG]
          Length = 244

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 20/188 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++++  S   F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 15  RHIKIIQSGAVFSFSLDAVLLANFA--------QIKRHSRVVDLAAGNGAVGLFLARKTD 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++A+ +   N ++   D  + D   +     +   DV+  NPPY +
Sbjct: 67  N-RVTMVELQPRLADMARRSVALNALA-NVDVHEGDLADTTKFVAKDSVDVVTCNPPYFK 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            +++           T+A   +  L   G        ++  +++
Sbjct: 125 ISARSITNPN-----DHLAIARHELTTDFA-TVARVSADLLKYQGKAYFVHRPDRLAELL 178

Query: 237 RIFESRKL 244
               +  L
Sbjct: 179 ATLTAVGL 186


>gi|113204695|gb|ABI34094.1| methionine S-methyltransferase [Medicago sativa]
          Length = 260

 Score = 62.4 bits (151), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 68/183 (37%), Gaps = 33/183 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS------------- 147
           + +LG G G + +A+ ++    K  G+DI+ +A++I+  N   N +              
Sbjct: 26  VSELGCGNGWISIAIAEKWLPSKVYGLDINPRAVKISWINLYLNALGENGQPIYDEEKKT 85

Query: 148 --ERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI-------- 194
             +R +  +SD  S         + IV   P I +   D +   + +             
Sbjct: 86  LLDRVEFHESDLLSYCRDNGIQLERIVGCIPQILNPNPDAMTKMITENASEEFLHSLSNY 145

Query: 195 -SLDGGID---GLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVN 248
            +L G ++   GL       +     +  +G+    +G    Q V   R+FE R   +  
Sbjct: 146 CALQGFVEDQFGLGLIARAVEEGISVIKPNGIMIFNMGGRPGQGV-CKRLFERRGFRITK 204

Query: 249 AFK 251
            ++
Sbjct: 205 LWQ 207


>gi|328792098|ref|XP_001121923.2| PREDICTED: methyltransferase-like protein 5-like [Apis mellifera]
          Length = 314

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +  +    +   + DLG G G + L   +       +G +I   AL+I   N   N
Sbjct: 142 MLYCAEVQFNDIEGHSVGDLGCGCGVLSLG-AQMLGASHVIGFEIDSDALKIQSKNC--N 198

Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            +    +T+Q D    + G     FD I+ NPP+
Sbjct: 199 EIDLFVETVQCDVLQYLPGRFEKYFDTIIMNPPF 232


>gi|289626787|ref|ZP_06459741.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648352|ref|ZP_06479695.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330868460|gb|EGH03169.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 332

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    + +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVIMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   S     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLQAQV--LTGDGIDSAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|302891585|ref|XP_003044674.1| hypothetical protein NECHADRAFT_44289 [Nectria haematococca mpVI
           77-13-4]
 gi|256725599|gb|EEU38961.1| hypothetical protein NECHADRAFT_44289 [Nectria haematococca mpVI
           77-13-4]
          Length = 452

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 8/145 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +      +      R    L +   L  S    +  D +  LD+GTG   +   L     
Sbjct: 75  HKTDFFDNPQCVTNRHNYVLWL-KGLLDSTSYEKPGDKLVGLDIGTGASCIYPLLGCAQR 133

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVE----GLFDVIVSNPP 173
            ++ +  +I  K+LE A+ N   N +  R   ++   +D    ++       D  ++NPP
Sbjct: 134 PWEFIATEIDTKSLEYARKNVALNKLEHRIKVVERKPTDAIIPLDDLNVDKIDFTMTNPP 193

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG 198
           + +S        E +   P  +  G
Sbjct: 194 FYKSEQEMIKSAEQKSRPPFTACTG 218


>gi|303254707|ref|ZP_07340809.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS455]
 gi|302598419|gb|EFL65463.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           BS455]
          Length = 316

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|83816335|ref|YP_446911.1| THUMP domain/methyltransferase domain-containing protein
           [Salinibacter ruber DSM 13855]
 gi|83757729|gb|ABC45842.1| THUMP domain/methyltransferase domain protein [Salinibacter ruber
           DSM 13855]
          Length = 369

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 71/187 (37%), Gaps = 30/187 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++PR   +  V  AL   L  ++      +LD   G+  + L         +  G D + 
Sbjct: 191 YQPRAALKANVAYALLR-LAHLDAPPNT-LLDPFCGSSTILLEAADLWADTQCYGSDWNE 248

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYIESVIVDCLGLE 186
           +A+  A++N    G+S+R    + D +  ++  F     D+IV+NPP+   +        
Sbjct: 249 EAVSGARTNVDLAGLSDRIAIRKGDVW-HLDETFADVTADLIVTNPPFGVRMASSM---- 303

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI----GYNQKVDVVRIFESR 242
             DF P             YR +   +   L   GL  + +     +N  +D    F SR
Sbjct: 304 --DFYP------------FYRRVLGQMGAVLRPGGLVVMLVLRQGPFNTVLDESEQFASR 349

Query: 243 KLFLVNA 249
            +  +  
Sbjct: 350 HVRAIEI 356


>gi|22297869|ref|NP_681116.1| ribosomal protein L11 methyltransferase [Thermosynechococcus
           elongatus BP-1]
 gi|38605297|sp|Q8DM00|PRMA_THEEB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|22294047|dbj|BAC07878.1| tlr0326 [Thermosynechococcus elongatus BP-1]
          Length = 299

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 57/178 (32%), Gaps = 34/178 (19%)

Query: 77  ETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           ET  L   AL   L +  E      I D+G G+G + +A L      K   VD S  A+ 
Sbjct: 137 ETTQLCLEALEMQLDQTFEPLPPTVIADIGCGSGILAIASLLLGAQ-KAYAVDTSDLAVT 195

Query: 136 IAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             + NA  NG+ +++    Q  W   V  L D +V N           L           
Sbjct: 196 ATQRNAELNGIRADQLIVHQGSW-EQVLELVDGVVCN----------ILAP--------- 235

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
                         I   +   +   G      I  +Q   V    + +   L + ++
Sbjct: 236 ----------VIIEILPHLPAIVKPKGWGIFSGILLDQADRVAEQLKRQGWSLGSVWR 283


>gi|327479477|gb|AEA82787.1| nucleotide methyltransferase, putative [Pseudomonas stutzeri DSM
           4166]
          Length = 375

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K    +R+ DLG G G + +     +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPKALGALRVADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQAILGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             D    D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PADIRAGDGLAEQSPGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L K G   +
Sbjct: 322 RMFTQAKAALTKGGELWI 339


>gi|307709667|ref|ZP_07646119.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK564]
 gi|307619565|gb|EFN98689.1| ribosomal protein L11 methyltransferase [Streptococcus mitis SK564]
          Length = 316

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPDMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILVHLTDDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 290


>gi|257885341|ref|ZP_05664994.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,501]
 gi|294618773|ref|ZP_06698300.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1679]
 gi|257821197|gb|EEV48327.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           1,231,501]
 gi|291594961|gb|EFF26311.1| ribosomal protein L11 methyltransferase [Enterococcus faecium
           E1679]
          Length = 315

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          D+   A+  AK N   N +++      +
Sbjct: 174 RGGETLLDVGTGSGVLSIA-AKYLGAKDVYAFDLDEVAVRSAKENMDMNEIAKDVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D  + +E   DVIV+N                      ++             +     R
Sbjct: 233 DLLTGIEIESDVIVAN---------------------ILA--------DIILLMIPDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L + G   V  I   +K  V+     +   +   F+
Sbjct: 264 LLKQTGTLIVSGIIEEKKQIVLDAMLEQGFIVDQIFQ 300


>gi|258508625|ref|YP_003171376.1| methyltransferase [Lactobacillus rhamnosus GG]
 gi|257148552|emb|CAR87525.1| Methyltransferase [Lactobacillus rhamnosus GG]
          Length = 247

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 69/188 (36%), Gaps = 20/188 (10%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            ++++  S   F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 18  RHIKIIQSGAVFSFSLDAVLLANFA--------QIKRHSRVVDLAAGNGAVGLFLARKTD 69

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++A+ +   N ++   D  + D   +     +   DV+  NPPY +
Sbjct: 70  N-RVTMVELQPRLADMARRSVALNALA-NVDVHEGDLADTTKFVAKDSVDVVTCNPPYFK 127

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            +++           T+A   +  L   G        ++  +++
Sbjct: 128 ISARSITNPN-----DHLAIARHELTTDFA-TVARVSADLLKYQGKAYFVHRPDRLAELL 181

Query: 237 RIFESRKL 244
               +  L
Sbjct: 182 ATLTAVGL 189


>gi|74138627|dbj|BAE27134.1| unnamed protein product [Mus musculus]
          Length = 634

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 370 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 426

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 427 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 483

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 484 PGLVSRLSSH 493


>gi|300853986|ref|YP_003778970.1| ribosomal protein L11 methyltransferase [Clostridium ljungdahlii
           DSM 13528]
 gi|300434101|gb|ADK13868.1| ribosomal protein L11 methyltransferase [Clostridium ljungdahlii
           DSM 13528]
          Length = 313

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 40/162 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTG+G + +   K     +  GVD+   A++ A +N   N +    + L  
Sbjct: 176 KPEYTVFDIGTGSGILAITSSKLGAK-EVTGVDLDPVAVKSASTNVGYNHIK-NVNILHG 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V+G  +++V+N           +  +V  F                  +ADGV  
Sbjct: 234 DLMDVVKGKANIVVAN-----------IIADVIIF------------------LADGVKD 264

Query: 216 HLNKDGL-----CSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            +   G+       +E    +K +VV         +    +D
Sbjct: 265 FMLPGGVFICSGIILE----RKEEVVDKLNKTGFKIEEINED 302


>gi|328953306|ref|YP_004370640.1| ribosomal L11 methyltransferase [Desulfobacca acetoxidans DSM
           11109]
 gi|328453630|gb|AEB09459.1| ribosomal L11 methyltransferase [Desulfobacca acetoxidans DSM
           11109]
          Length = 275

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 10/133 (7%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LDLGTGTG + LA L      + + VD    A+  A+ NAV N        +  D  
Sbjct: 139 PTVLDLGTGTGILSLACLAMGAK-RILAVDNHTLAIATAQKNAVYNRAENHITFVCGDVL 197

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD------G 212
             +    D++++N     SV+   L  EV    P   +  G+ G    + I         
Sbjct: 198 DYLATPADLVLAN--IFFSVLSSMLDQEVFFNKPWY-IFSGLIGTEVNKFITRMQRLPLE 254

Query: 213 VSRHLNKDGLCSV 225
           V + L+ +   ++
Sbjct: 255 VVQVLDDNLWFAI 267


>gi|148665095|gb|EDK97511.1| HpaII tiny fragments locus 9c, isoform CRA_e [Mus musculus]
          Length = 626

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 383 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 439

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 440 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 496

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 497 PGLVSRLSSH 506


>gi|59713943|ref|YP_206718.1| cyclopropane fatty acyl phospholipid synthase
           (unsaturated-phospholipid methyltransferase) [Vibrio
           fischeri ES114]
 gi|59482191|gb|AAW87830.1| cyclopropane fatty acyl phospholipid synthase
           (unsaturated-phospholipid methyltransferase) [Vibrio
           fischeri ES114]
          Length = 418

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 36/181 (19%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   ++ F +  +  SS  +   P  E  ++ A    L     R+E +    +L++
Sbjct: 147 HYDLGNEMYKTFLDKEMLYSSAIY---PHQEANLEEAQLFKLQTICERLELKPGETLLEI 203

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   +     K     IS    E A+      G+ +    L+ D + ++EG 
Sbjct: 204 GTGWGALAIYAAQNY-GVKVTTTTISDAQYEYAEQRVKQLGLEDSITLLKQD-YRTLEGQ 261

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D +VS              +E    +   +               D  S+HL  +G   
Sbjct: 262 YDKLVS-----------IEMIEAVGHEYLSTFF-------------DVCSQHLKPEGKML 297

Query: 225 V 225
           +
Sbjct: 298 I 298


>gi|227903273|ref|ZP_04021078.1| methyltransferase [Lactobacillus acidophilus ATCC 4796]
 gi|227869078|gb|EEJ76499.1| methyltransferase [Lactobacillus acidophilus ATCC 4796]
          Length = 141

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 10/104 (9%)

Query: 62  NVRLTLSSDTFEP-RPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++    +  F   R +  + +L+ +    S P+        ILD+GTG G + L   K 
Sbjct: 39  DLKFNTDAGVFSKMRVDYGSGVLIKAMKDISFPK------ANILDVGTGYGPIGLFAAKF 92

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
            P  +   +D++ + L +A+ NA  N + E  +   S+ +  ++
Sbjct: 93  WPDQEVDMIDVNERGLNLARENAKVNNI-ENVNIYASNCYEQID 135


>gi|222152168|ref|YP_002561328.1| hypothetical protein MCCL_1925 [Macrococcus caseolyticus JCSC5402]
 gi|222121297|dbj|BAH18632.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 251

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 20/168 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +  + D F    +  LL            + R   +I+DL +G G + L LL     
Sbjct: 24  NLSIIQNDDVFSFSTDALLLAHF--------TQLRAKDQIMDLCSGNGVIPL-LLSSRTT 74

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYIES 177
                ++I    +++A      N +  +      D        +   FDV+  NPPY   
Sbjct: 75  MTIEAIEIQDALVDMAVRTIQYNDLVSQIKIHHMDLKDVGSTFLPSQFDVVTCNPPYFRE 134

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   E                +  ++      +  L + G   +
Sbjct: 135 NQSYQHLKEAHRIARHEV-------MCTFKDCVRAANHLLKQGGKMVI 175


>gi|153008078|ref|YP_001369293.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188]
 gi|151559966|gb|ABS13464.1| methyltransferase small [Ochrobactrum anthropi ATCC 49188]
          Length = 340

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISC 131
           EP   +  ++D   A  +P +EK     + DLG G G +    LK +   K     +   
Sbjct: 172 EPGMFSHGVIDKGSALLVPHMEKIFFGNVADLGAGWGYLAAQCLKFADRIKSIDLYEADY 231

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +ALE A+ N    G S        D  S  + G++D ++ NPP+ E  + D         
Sbjct: 232 EALEAARGNLERLGASVPISFNWFDVTSEKMAGIYDTVIMNPPFHEGRVTDVSLG----- 286

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                           +      +  L   G   +
Sbjct: 287 ----------------QAFIAAAASRLKPGGRLLM 305


>gi|149926678|ref|ZP_01914938.1| protein-L-isoaspartate O-methyltransferase, putative [Limnobacter
           sp. MED105]
 gi|149824607|gb|EDM83823.1| protein-L-isoaspartate O-methyltransferase, putative [Limnobacter
           sp. MED105]
          Length = 222

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L  +E     ++L++GTGTG +   + ++        ++++    E+A+SN   NG+
Sbjct: 72  ARILQELELGTHEKVLEIGTGTGYMAALMAQQC--AHVTTIELNPAVAELARSNLKKNGI 129

Query: 147 SERFDTLQSDWF--SSVEGLFDVIVSN--PPYIESVIVDCLGL 185
           + R   L+   F  +   G FD IV +   P + + +++ +  
Sbjct: 130 T-RVKVLEGCGFQLAPTLGQFDAIVLSGATPIMPAGLLEAVNP 171


>gi|124487421|ref|NP_001074469.1| tRNA (uracil-5-)-methyltransferase homolog A isoform 1 [Mus
           musculus]
          Length = 613

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 370 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 426

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 427 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 483

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 484 PGLVSRLSSH 493


>gi|254243452|ref|ZP_04936774.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126196830|gb|EAZ60893.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 398

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 QGKRVLDLFSYIGGWGIQ-AAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      +  FDV++++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAADERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|300914495|ref|ZP_07131811.1| Protein of unknown function methylase putative [Thermoanaerobacter
           sp. X561]
 gi|307724269|ref|YP_003904020.1| hypothetical protein Thet_1126 [Thermoanaerobacter sp. X513]
 gi|320116164|ref|YP_004186323.1| hypothetical protein Thebr_1366 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|300889430|gb|EFK84576.1| Protein of unknown function methylase putative [Thermoanaerobacter
           sp. X561]
 gi|307581330|gb|ADN54729.1| Conserved hypothetical protein CHP00095 [Thermoanaerobacter sp.
           X513]
 gi|319929255|gb|ADV79940.1| Conserved hypothetical protein CHP00095 [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 391

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+E+AK N   NG  ER + +  + F
Sbjct: 218 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEMAKKNVELNGYQERCNFVCDNAF 276

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD ++ +PP             V+D     +L G       Y+ I   
Sbjct: 277 DLLRKYDKENRKFDTVILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 319

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 320 ALKILREGGFLI 331


>gi|325676589|ref|ZP_08156267.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC
           33707]
 gi|325552767|gb|EGD22451.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus equi ATCC
           33707]
          Length = 412

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 22/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+    +DLG GTG + ++L K  P  + +  D S  A+  A + A  NGV+ R   L+ 
Sbjct: 266 REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAARVRVLRD 325

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  SS+ E   D+I+ NPP+     V                  G  G      + D   
Sbjct: 326 DALSSLPESSVDLILCNPPFHVGAAVHT----------------GSAG-----KMFDAAG 364

Query: 215 RHLNKDGLCS 224
           R L   G   
Sbjct: 365 RVLRPGGELW 374


>gi|123470775|ref|XP_001318591.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121901354|gb|EAY06368.1| hypothetical protein TVAG_151750 [Trichomonas vaginalis G3]
          Length = 534

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLAL 115
                 ++  +S  +F    +T       L   +  + + D   +L D+  GTG + L++
Sbjct: 337 EEKLRGLKFDISPMSFF---QTNTPGAEILFSRVESLAEVDKSTVLIDVCCGTGVIGLSM 393

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            K++   K +G+DI   A+E AK NA  N +    + + +     + G+ D  
Sbjct: 394 AKKAK--KVIGIDIEKDAIEDAKKNATKNKIK-NAEFIAAPAQDVLPGILDQC 443


>gi|15595551|ref|NP_249045.1| hypothetical protein PA0354 [Pseudomonas aeruginosa PAO1]
 gi|116054082|ref|YP_788525.1| hypothetical protein PA14_04640 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296386850|ref|ZP_06876349.1| SAM-dependent methyltransferase [Pseudomonas aeruginosa PAb1]
 gi|313112031|ref|ZP_07797816.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
           39016]
 gi|9946204|gb|AAG03743.1|AE004473_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115589303|gb|ABJ15318.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|310884318|gb|EFQ42912.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
           39016]
          Length = 398

 Score = 62.0 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 QGKRVLDLFSYIGGWGIQ-AAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      +  FDV++++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAADERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|324992256|gb|EGC24178.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK405]
          Length = 317

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N   E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIELNPGMENIHVAP 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    V+   DVIV+N                      ++             + +   
Sbjct: 228 GDLLRGVDIEADVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-DTVRESAEAAGFFL 291


>gi|299752945|ref|XP_001832959.2| arsenite S-adenosylmethyltransferase [Coprinopsis cinerea
           okayama7#130]
 gi|298410072|gb|EAU88648.2| arsenite S-adenosylmethyltransferase [Coprinopsis cinerea
           okayama7#130]
          Length = 431

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 29/135 (21%)

Query: 96  RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTL 153
           ++  R+LDLG+G G  + LA  K  P  + +G+D S + + +A+ NA +  ++  R   +
Sbjct: 81  KEGERVLDLGSGGGIDIFLAAAKVGPTGQAIGLDGSTEMIALARRNAASKKLTPPRVAFV 140

Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            ++    +   +   D ++SN       +++ L               G       + I 
Sbjct: 141 HANLEKELPIEDNSIDCVISN------CVINLLP------------TAGK------KHIF 176

Query: 211 DGVSRHLNKDGLCSV 225
             VSR L   G   +
Sbjct: 177 KEVSRVLKPGGRVVI 191


>gi|262831165|sp|B8CU29|TRMN6_SHEPW RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
          Length = 241

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G G+G + L +  +        +++   A    +SN   +  S+R  
Sbjct: 29  WAPLSNSKNILDIGAGSGLLSL-MAAQRSKANITAIELDENAALDCQSNFNLSPWSKRLT 87

Query: 152 TL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            L    Q    ++ +  FD I+ NPPY ++                 +     D LS   
Sbjct: 88  LLTRSIQQFCTTAKKHSFDHIICNPPYFDNGPQSNSA--------LRATARHTDSLSF-D 138

Query: 208 TIADGVSRHLNKDG 221
            +   +S  L+  G
Sbjct: 139 ELLTAISSLLSPAG 152


>gi|237809272|ref|YP_002893712.1| 50S ribosomal protein L11 methyltransferase [Tolumonas auensis DSM
           9187]
 gi|259534600|sp|C4LAF1|PRMA_TOLAT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|237501533|gb|ACQ94126.1| ribosomal protein L11 methyltransferase [Tolumonas auensis DSM
           9187]
          Length = 292

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 29/173 (16%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P    +L+D  LAF           L  ++  D     ++D G 
Sbjct: 106 FGERLWICPSWRDVPDPTAVNVLLDPGLAFGTGTHPTTALCLQWLDSLDLKGKTLVDFGC 165

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     + +G+DI  +A+E ++ NA  NGVS++ +    +         D
Sbjct: 166 GSGILAIAALKLGAE-RVIGIDIDPQAIEASRDNAQRNGVSDQLELYLPE-DQPKNFQAD 223

Query: 167 VIVSNPPYIESVIVDCL-GLEVRDFDPRISLDGGIDGLSHYRTIAD-GVSRHL 217
           ++V+N        +  L    V+             GL     I +      L
Sbjct: 224 IVVANILAGPLRELSGLISGLVKPH-----------GLMAISGILESQAPELL 265


>gi|212636947|ref|YP_002313472.1| O-methyltransferase [Shewanella piezotolerans WP3]
 gi|212558431|gb|ACJ30885.1| Conserved hypothetical O-methyltransferase [Shewanella
           piezotolerans WP3]
          Length = 297

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                +   ILD+G G+G + L +  +        +++   A    +SN   +  S+R  
Sbjct: 85  WAPLSNSKNILDIGAGSGLLSL-MAAQRSKANITAIELDENAALDCQSNFNLSPWSKRLT 143

Query: 152 TL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            L    Q    ++ +  FD I+ NPPY ++                 +     D LS   
Sbjct: 144 LLTRSIQQFCTTAKKHSFDHIICNPPYFDNGPQSNSA--------LRATARHTDSLSF-D 194

Query: 208 TIADGVSRHLNKDG 221
            +   +S  L+  G
Sbjct: 195 ELLTAISSLLSPAG 208


>gi|152988111|ref|YP_001345842.1| hypothetical protein PSPA7_0447 [Pseudomonas aeruginosa PA7]
 gi|150963269|gb|ABR85294.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 398

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 QGKRVLDLFSYIGGWGIQ-AAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      +  FDV++++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAADERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|124487423|ref|NP_001074468.1| tRNA (uracil-5-)-methyltransferase homolog A isoform 2 [Mus
           musculus]
 gi|74139903|dbj|BAE31790.1| unnamed protein product [Mus musculus]
 gi|74141122|dbj|BAE22119.1| unnamed protein product [Mus musculus]
 gi|74191426|dbj|BAE30293.1| unnamed protein product [Mus musculus]
 gi|74191631|dbj|BAE30387.1| unnamed protein product [Mus musculus]
 gi|74198831|dbj|BAE30643.1| unnamed protein product [Mus musculus]
 gi|74198924|dbj|BAE30683.1| unnamed protein product [Mus musculus]
 gi|74207465|dbj|BAE30911.1| unnamed protein product [Mus musculus]
 gi|74212582|dbj|BAE31030.1| unnamed protein product [Mus musculus]
 gi|74214625|dbj|BAE31153.1| unnamed protein product [Mus musculus]
 gi|74219662|dbj|BAE29598.1| unnamed protein product [Mus musculus]
 gi|74220248|dbj|BAE31303.1| unnamed protein product [Mus musculus]
 gi|74225302|dbj|BAE31584.1| unnamed protein product [Mus musculus]
 gi|74225530|dbj|BAE31672.1| unnamed protein product [Mus musculus]
 gi|74228782|dbj|BAE21880.1| unnamed protein product [Mus musculus]
 gi|148665091|gb|EDK97507.1| HpaII tiny fragments locus 9c, isoform CRA_a [Mus musculus]
          Length = 613

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 370 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 426

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 427 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 483

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 484 PGLVSRLSSH 493


>gi|303231904|ref|ZP_07318613.1| methyltransferase small domain protein [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302513433|gb|EFL55466.1| methyltransferase small domain protein [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 242

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 23/195 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++    D F    +   LV                 R +DLGTGTG + L +      
Sbjct: 14  DLKIYQRQDQFRFSFDAIALVHFC--------RFNQRHRYIDLGTGTGVLPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
               GV+I+     +A+ + + N  S     +Q D+ +          FD ++ NPPY  
Sbjct: 65  GHITGVEINDVMANMAERSVLYNHKSNVISIVQGDYRTMNYQQFGSKPFDGVLVNPPYF- 123

Query: 177 SVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               D    EV  +    ++L    DG +    +    SR +   G   +     +  ++
Sbjct: 124 ----DHRRGEVPNNHHLSLAL---HDGCTSIDDVCTAASRLIKNKGRLWMVYSAPRLSEL 176

Query: 236 VRIFESRKLFLVNAF 250
           +    +    +    
Sbjct: 177 IHALTAVGFAVKRIR 191


>gi|294634559|ref|ZP_06713094.1| ribosomal RNA small subunit methyltransferase D [Edwardsiella tarda
           ATCC 23685]
 gi|291092073|gb|EFE24634.1| ribosomal RNA small subunit methyltransferase D [Edwardsiella tarda
           ATCC 23685]
          Length = 385

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  + +     + DLG G G + L +L   P  + +  D S  A+  +  N  
Sbjct: 220 DIGARFFLQHLPEDLQGEVADLGCGNGVLGLMVLHRCPQARVLFADESYMAVASSHLNVQ 279

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +    +  +  E G  D ++ NPP+ +   +            +++ D  
Sbjct: 280 HNRPQDLERSEFWVGNGLAGREGGSLDAVLCNPPFHQQHSITD----------QVAWD-- 327

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L ++G+  +
Sbjct: 328 ---------MFVAARRCLKRNGVLYI 344


>gi|148665092|gb|EDK97508.1| HpaII tiny fragments locus 9c, isoform CRA_b [Mus musculus]
          Length = 606

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 363 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 419

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 420 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 476

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 477 PGLVSRLSSH 486


>gi|116283517|gb|AAH27431.1| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Mus
           musculus]
 gi|116283883|gb|AAH38486.1| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Mus
           musculus]
          Length = 602

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 359 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 415

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN +S   +         V
Sbjct: 416 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 472

Query: 162 EGLFDVIVSN 171
            GL   + S+
Sbjct: 473 PGLVSRLSSH 482


>gi|297581756|ref|ZP_06943678.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385]
 gi|297534163|gb|EFH73002.1| ribosomal protein L11 methyltransferase [Vibrio cholerae RC385]
          Length = 295

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 109 FGRRLWICPSWREVPDPQAVNVMLDPGLAFGTGTHPTTALCLEWLDNLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV ++ +               
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAARNGVEDQIEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R ++  +   L   G  ++ 
Sbjct: 214 -------YLPKDQPEGLVADVVVANIL----AGP-----LRELSPIIKGLLKPCGQLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            I   Q   V   +  
Sbjct: 258 GILDTQAESVAEFYRD 273


>gi|222085073|ref|YP_002543603.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
 gi|221722521|gb|ACM25677.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
          Length = 419

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 31/170 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLAL 115
           F +     S   F P P   L  D A       I  +       R+L++G+G G + + L
Sbjct: 135 FLDEDWQYSCAYFVP-PGISL--DEAQVAKKRHIAAKLLVEPGQRVLEIGSGWGGMGMYL 191

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            + +P     G+ +S + L++++  A   G+S+R      D+    +  FD IVS     
Sbjct: 192 AEANPGLDFTGITLSEEQLKVSRERAAKRGLSDRVRFELQDYRYLKDRKFDRIVS----- 246

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      V  F+          G+  YR   + VS  L+ +G+  +
Sbjct: 247 -----------VGMFE--------HVGIGDYRKYFNKVSELLDDNGVMLL 277


>gi|146321961|ref|YP_001201672.1| ribosomal protein L11 methyltransferase [Streptococcus suis
           98HAH33]
 gi|145692767|gb|ABP93272.1| Ribosomal protein L11 methylase [Streptococcus suis 98HAH33]
          Length = 327

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 180 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDEVAVRVAQENIDLNANTSNIHVAAG 238

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    ++   +VIV+N                      ++             + +   R
Sbjct: 239 DLLRGIDIKAEVIVAN---------------------ILA--------DILIHLTEDAYR 269

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 270 LVKDEGYLIMSGIIADKWDMVRASAEAAGFFL 301


>gi|307155281|ref|YP_003890665.1| type 12 methyltransferase [Cyanothece sp. PCC 7822]
 gi|306985509|gb|ADN17390.1| Methyltransferase type 12 [Cyanothece sp. PCC 7822]
          Length = 399

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +   R+ +RILD G GTG     L+  +P  + VG+D+S KALEIA+     
Sbjct: 41  AAYNFCCGQKPPRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERCRR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVS 170
           +GVS +      F  L+ +  S + G FD+I S
Sbjct: 101 SGVSAKHGSTVSFHHLKLEEASQLSGEFDLINS 133


>gi|5733429|gb|AAD49574.1| methionine S-methyltransferase [Arabidopsis thaliana]
          Length = 1071

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 36/220 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G++    + + +    F P   +    +  L      I K     + +LG G G + +A+
Sbjct: 76  GFQSRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDTIFKDKT--VSELGCGNGWISIAI 132

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWF-- 158
             +    K  G+DI+ +A++I+  N   N +                +R +  +SD    
Sbjct: 133 AAKWLPSKVYGLDINPRAVKISWINLYLNALDDNGEPVYDEEKKTLLDRVEFYESDLLGY 192

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLSH 205
               +   + IV   P I +   + +   + +              +L G ++   GL  
Sbjct: 193 CRDNKIQLERIVGCIPQILNPNPEAMSKLITENASEEFLHSLSNYCALQGFVEDQFGLGL 252

Query: 206 YRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRK 243
                +     +   G+    +G    Q V   R+FE R 
Sbjct: 253 IARAVEEGISVIKPAGVMIFNMGGRPGQGV-CRRLFERRG 291


>gi|269791669|ref|YP_003316573.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099304|gb|ACZ18291.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 412

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 46/133 (34%), Gaps = 29/133 (21%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++     RIL++GTGTGA+   L +++     V ++   +A+E+A+ N    G++     
Sbjct: 254 LQPLWGARILEVGTGTGALTCELARQAGPGVVVSIERDPEAMELARGNLERLGLALGVHL 313

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +       + G FD IV                            GG  G      +   
Sbjct: 314 VGGSAPLDLRGTFDRIVI---------------------------GGHGG--ALEDVIRW 344

Query: 213 VSRHLNKDGLCSV 225
               L   G   V
Sbjct: 345 ARDLLVPGGRVLV 357


>gi|254824470|ref|ZP_05229471.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J1-194]
 gi|255521822|ref|ZP_05389059.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J1-175]
 gi|293593707|gb|EFG01468.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J1-194]
          Length = 314

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 231 NNLLQDINKTDVDIVVAN---ILAEVILLFPEDVYK-----ALKPG--GIFIASGIIEDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 281 AKVVEEALKKAG-LVIEKMEQQGDWV-AIISKRG 312


>gi|218296236|ref|ZP_03496992.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           aquaticus Y51MC23]
 gi|218243308|gb|EED09838.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           aquaticus Y51MC23]
          Length = 219

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 26/131 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++   RILDL TGTG + L L   +P  + VG D +   LEIA+  A   G+S  F    
Sbjct: 34  EKGPRRILDLATGTGDLALLLKASAPEAEVVGADFAPPMLEIARKKASARGLSVAFQEAD 93

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +G FD +              +    R+F             + YR     + 
Sbjct: 94  ALALPFPDGSFDAV-------------TIAFGFRNF-------------ADYRKALAELR 127

Query: 215 RHLNKDGLCSV 225
           R L   G   +
Sbjct: 128 RVLAPGGRLVI 138


>gi|125717117|ref|YP_001034250.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK36]
 gi|125497034|gb|ABN43700.1| Ribosomal protein L11 methyltransferase, putative [Streptococcus
           sanguinis SK36]
 gi|324994346|gb|EGC26260.1| ribosomal protein L11 methyltransferase [Streptococcus sanguinis
           SK678]
          Length = 318

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 47/154 (30%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ + + N   N   E      
Sbjct: 171 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVVQENIELNPGMENIHVAP 228

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    VE   DVIV+N                      ++             + +   
Sbjct: 229 GDLLRGVEIKADVIVAN---------------------ILA--------DILVHLTEDAY 259

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E+   FL
Sbjct: 260 RLVKDEGYLIMSGIISEKW-EMVRESAEAAGFFL 292


>gi|323704199|ref|ZP_08115778.1| ribosomal protein L11 methyltransferase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536265|gb|EGB26037.1| ribosomal protein L11 methyltransferase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 308

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 22/135 (16%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKR 96
           W+ +Y       R+ +     +  PE   +V                  +         +
Sbjct: 113 WKKYYKTFKIGKRVVIKPSWEDYNPEENEIVVEIDPGMAFGTGSHETTKMCIEFLEDNVK 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G GTG + + +  +    K   VD+   AL++A  N   N + +  + L+SD
Sbjct: 173 SGDTVFDVGCGTGILSI-VSSKLGAKKVFAVDVDEVALKVASLNVKLNKL-DNIEVLKSD 230

Query: 157 WFSSVEGLFDVIVSN 171
               + G  D+IV+N
Sbjct: 231 LLKELNGEADLIVAN 245


>gi|253682337|ref|ZP_04863134.1| ribosomal protein L11 methyltransferase [Clostridium botulinum D
           str. 1873]
 gi|253562049|gb|EES91501.1| ribosomal protein L11 methyltransferase [Clostridium botulinum D
           str. 1873]
          Length = 312

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 75/216 (34%), Gaps = 50/216 (23%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEK--------------R 96
           W+ +Y      +    +P  E  +      +++     +                     
Sbjct: 117 WKKYYKPTKIGNEIVVKPTWEEYIKKDDEIVIELDPGMAFGTGTHETTRLCVKALEEYVN 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K +     VGVD+   A++ AK   V        + L  +
Sbjct: 177 EDSVVFDIGTGSGILSIAAAKLNAK-HVVGVDLDPVAVDAAKE-NVELNNLNNIEILYGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               V+G  +++V+N   I + I+  L  +V+ F     LDGG                +
Sbjct: 235 LMEVVKGKANIVVAN---ILADIIKILAEDVKKF----VLDGG----------------Y 271

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
               G+       ++K DV+   +     +     D
Sbjct: 272 FISSGIIL-----DRKDDVIEKLQECGFKIEKINTD 302


>gi|71282529|ref|YP_271142.1| ribosomal RNA small subunit methyltransferase C [Colwellia
           psychrerythraea 34H]
 gi|123630908|sp|Q47VN0|RSMC_COLP3 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|71148269|gb|AAZ28742.1| ribosomal RNA small subunit methyltransferase C [Colwellia
           psychrerythraea 34H]
          Length = 357

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +      F    + +L V +AL   L  +  +   ++LD G G G +   + K+    
Sbjct: 187 LTIASLPGVF---SQQKLDVGTAL--LLSNLPSKMTGKVLDFGCGAGVISCFIGKKFSGT 241

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
               +D+S  AL  A+ +   NG+S       S+  S V   +  +VSNPP+ + V    
Sbjct: 242 NLSLLDVSALALTSAQESLALNGLSGNVFP--SNSLSDVNEHYQHVVSNPPFHQGVKTHY 299

Query: 183 LGLE 186
              E
Sbjct: 300 QASE 303


>gi|46907699|ref|YP_014088.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|254991900|ref|ZP_05274090.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J2-064]
 gi|60390488|sp|Q71ZJ9|PRMA_LISMF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|46880968|gb|AAT04265.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
          Length = 314

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 231 NNLLQDINKTDVDIVVAN---ILAEVILLFPEDVYK-----ALKPG--GIFIASGIIEDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 281 AKVVEEALKKAG-LVIEKMEQQGDWV-AIISKRG 312


>gi|241763998|ref|ZP_04762038.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN]
 gi|241366672|gb|EER61137.1| Methyltransferase type 11 [Acidovorax delafieldii 2AN]
          Length = 220

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 62  NVRLTLSSDTFEPRPETELLV---DSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLK 117
             R  L+     P  +  +++   + A   +L  +   +    + D G GTG + L    
Sbjct: 7   GFRPALAHHVLTPLYDRVVVLTTREQAFKPALVAQASIQHGHDVSDAGCGTGTLALLAAT 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             P  +  GVD     L +A+  A +     RFD   S +    +G FD +VS
Sbjct: 67  ACPQARVTGVDADPAILSLARRKAASVAAPIRFDEGLSTYLPYGDGSFDRVVS 119


>gi|56459604|ref|YP_154885.1| 16S RNA G1207 methylase RsmC [Idiomarina loihiensis L2TR]
 gi|81821764|sp|Q5R049|RSMC_IDILO RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|56178614|gb|AAV81336.1| 16S RNA G1207 methylase RsmC [Idiomarina loihiensis L2TR]
          Length = 334

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 48/150 (32%), Gaps = 25/150 (16%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   +   +D A    L  I+     R +D   G G +   L   +   + +  D+S  A
Sbjct: 172 PGVFSREHIDPATLLLLQHIKDLPKGRGMDFACGAGVIAKQLASVA--TELMACDVSPIA 229

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +  ++          + +   +D      G FD IVSNPP+      D            
Sbjct: 230 IAASE--ITLANEPVKTELRLADGIPDNAGQFDFIVSNPPFHTGQRTD------------ 275

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                        R       +HLNK G+ 
Sbjct: 276 ---------YEIAREFISNARQHLNKQGVF 296


>gi|284048077|ref|YP_003398416.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans
           DSM 20731]
 gi|283952298|gb|ADB47101.1| ribosomal protein L11 methyltransferase [Acidaminococcus fermentans
           DSM 20731]
          Length = 313

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 21/130 (16%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLV-----------DSALAFSLPRIEK--R 96
           W+ +++       + +  S +T+EP+ E +++             +  +  + R+E+   
Sbjct: 115 WKQYFHTTKVGKKIVIKPSWETYEPQGEEKVIALDPGMAFGTGTHATTSMCIQRLEELVT 174

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+GTG+G +               VDI  KA+E+A+ N   NG+S+R    Q +
Sbjct: 175 PDCEVFDVGTGSG-ILAMAAALLGAKTIHAVDIDEKAVEVARENIAQNGLSDRVTVNQGN 233

Query: 157 WFSSVEGLFD 166
                 G  D
Sbjct: 234 LLDGTPGQAD 243


>gi|195614602|gb|ACG29131.1| hypothetical protein [Zea mays]
          Length = 558

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L L + + 
Sbjct: 367 RGLAFQISANSFFQTNTKQADVLYKLIEDSAGLKGDGSEIVLDLFCGTGTIGLTLARRAK 426

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+E A+ NA  NG+      +Q D       F       D+I+S+P
Sbjct: 427 --HIYGYEVVPEAIEDARKNAKLNGI-NNATFVQGDLNKINESFGKEFPKPDIIISDP 481


>gi|157363161|ref|YP_001469928.1| methyltransferase small [Thermotoga lettingae TMO]
 gi|157313765|gb|ABV32864.1| methyltransferase small [Thermotoga lettingae TMO]
          Length = 228

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 63/181 (34%), Gaps = 24/181 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            K+D  ++++LG  TG VC  +  +      VG+D     + +A+     N +  + D +
Sbjct: 42  PKKDQRKVIELGCATGVVCAYIASKY-NRYVVGIDKDPDLIHLAQRTIQMNNLYGKVDLV 100

Query: 154 QSDWFSSVE----GLFDVIVSNPPY----IESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                   +      FD+++SNPP+    + S           DF+              
Sbjct: 101 NISCKDVSKFFAAESFDMVISNPPHHITGVPSPNEKRRQTRTADFE-------------T 147

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG--NDRVLLFC 263
            R   +  +  L   G     +     +  +  F  +K+        YG    D VL+  
Sbjct: 148 VREFVEAAAYLLKNRGEFVFVLSPTHLIFWINEFLRKKMQPKKILPVYGSSRRDAVLILM 207

Query: 264 R 264
           R
Sbjct: 208 R 208


>gi|325269725|ref|ZP_08136336.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM
           16608]
 gi|324987926|gb|EGC19898.1| ribosomal protein L11 methyltransferase [Prevotella multiformis DSM
           16608]
          Length = 288

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD G GTG + + +  +    + V  DI   ++  A+ NA  NGV    D L+ D
Sbjct: 151 KGKRVLDCGCGTGILSI-VAAKCGAKEAVCYDIDEWSVRNAQHNAELNGVE--IDVLEGD 207

Query: 157 --WFSSVEGLFDVIVSN 171
               S + G+FD+I++N
Sbjct: 208 KSVLSHISGVFDIIMAN 224


>gi|297792265|ref|XP_002864017.1| methionine S-methyltransferase [Arabidopsis lyrata subsp. lyrata]
 gi|297309852|gb|EFH40276.1| methionine S-methyltransferase [Arabidopsis lyrata subsp. lyrata]
          Length = 1070

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 36/220 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G++    + + +    F P   +    +  L      I K     + +LG G G + +A+
Sbjct: 75  GFQSRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDTIFKDKT--VSELGCGNGWISIAI 131

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWF-- 158
             +    K  G+DI+ +A++I+  N   N +                +R +  +SD    
Sbjct: 132 AAKWLPSKVYGLDINPRAVKISWINLYLNALDDIGEPVYDEEKKTLLDRVEFYESDLLGY 191

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLSH 205
               +   + IV   P I +   + +   + +              +L G ++   GL  
Sbjct: 192 CRDNKIQLERIVGCIPQILNPNPEAMSKLITENASEEFLHSLSNYCALQGFVEDQFGLGL 251

Query: 206 YRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRK 243
                +     +   G+    +G    Q V   R+FE R 
Sbjct: 252 IARAVEEGISVIKPAGIMIFNMGGRPGQGV-CRRLFERRG 290


>gi|15240558|ref|NP_199792.1| MMT; S-adenosylmethionine-dependent methyltransferase [Arabidopsis
           thaliana]
 gi|50401175|sp|Q9LTB2|MMT1_ARATH RecName: Full=Methionine S-methyltransferase; AltName:
           Full=AdoMet:Met S-methyltransferase
 gi|8978257|dbj|BAA98148.1| methionine S-methyltransferase [Arabidopsis thaliana]
 gi|20453177|gb|AAM19829.1| AT5g49810/K21G20_2 [Arabidopsis thaliana]
 gi|27363322|gb|AAO11580.1| At5g49810/K21G20_2 [Arabidopsis thaliana]
 gi|332008475|gb|AED95858.1| methionine S-methyltransferase [Arabidopsis thaliana]
          Length = 1071

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 36/220 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G++    + + +    F P   +    +  L      I K     + +LG G G + +A+
Sbjct: 76  GFQSRKKLTMMVIPSIFIPEDWSFTFYE-GLNRHPDTIFKDKT--VSELGCGNGWISIAI 132

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQSDWF-- 158
             +    K  G+DI+ +A++I+  N   N +                +R +  +SD    
Sbjct: 133 AAKWLPSKVYGLDINPRAVKISWINLYLNALDDNGEPVYDEEKKTLLDRVEFYESDLLGY 192

Query: 159 -SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI---------SLDGGID---GLSH 205
               +   + IV   P I +   + +   + +              +L G ++   GL  
Sbjct: 193 CRDNKIQLERIVGCIPQILNPNPEAMSKLITENASEEFLHSLSNYCALQGFVEDQFGLGL 252

Query: 206 YRTIADGVSRHLNKDGLCSVEIG--YNQKVDVVRIFESRK 243
                +     +   G+    +G    Q V   R+FE R 
Sbjct: 253 IARAVEEGISVIKPAGIMIFNMGGRPGQGV-CRRLFERRG 291


>gi|170039575|ref|XP_001847606.1| prip interacting protein, pimt [Culex quinquefasciatus]
 gi|167863124|gb|EDS26507.1| prip interacting protein, pimt [Culex quinquefasciatus]
          Length = 1016

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 9/154 (5%)

Query: 101  ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
            ++D   G G   + L       + + +DI  K +E+AK NA   GV++R + +  D+ + 
Sbjct: 861  VVDGFCGCGGNSIQLA--FTCNQVIAIDIDPKKIEMAKHNAAVYGVADRIEFIVGDFLAL 918

Query: 161  VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             +    D +  +PP+        L  EV D +  +      + +   R I+  V+ +L +
Sbjct: 919  ADRLQADAVFLSPPW---GGPSYLKDEVYDLEASLIPVPATELMRKARQISPNVALYLPR 975

Query: 220  D---GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +      ++  G N  V++ + F  RKL  + A+
Sbjct: 976  NSNTQQLTMLAGPNNAVEIEQNFLDRKLIALTAY 1009


>gi|304314880|ref|YP_003850027.1| DNA modification methylase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588339|gb|ADL58714.1| predicted DNA modification methylase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 336

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 21/131 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD   GTG + +         + +G DI  + +E  + N    G+++ F+ ++S
Sbjct: 186 RSGDRLLDPFCGTGGILI--EAGLMDVRVMGADIDWRMVEGTRKNLQHYGITD-FEVIRS 242

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D     +EG  D IV++PPY  S                 +   G      YR   +   
Sbjct: 243 DARDLRLEGGVDAIVTDPPYGIS-----------------ASTAGERSEKLYREFLNSAY 285

Query: 215 RHLNKDGLCSV 225
            +L +DG+  +
Sbjct: 286 SNLKEDGVICM 296


>gi|227514723|ref|ZP_03944772.1| methyltransferase [Lactobacillus fermentum ATCC 14931]
 gi|260662312|ref|ZP_05863208.1| O-methyltransferase [Lactobacillus fermentum 28-3-CHN]
 gi|227086927|gb|EEI22239.1| methyltransferase [Lactobacillus fermentum ATCC 14931]
 gi|260553695|gb|EEX26587.1| O-methyltransferase [Lactobacillus fermentum 28-3-CHN]
          Length = 267

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  SS+ F         +D+ L  +  R  ++    ++DL  G GAV L L +    
Sbjct: 37  GVQIIQSSEVFAFS------LDAVLLAAFVRPSQKRRALLVDLCAGNGAVGLFLNRRFAG 90

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + V V++  +  ++A  +   N +++R+  + +D         +   DV+V NPPY + 
Sbjct: 91  -QVVEVELQQRLADMADRSIQLNDLADRYQVINADVKDVYQYVAKDQADVVVCNPPYFKD 149

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     ++ +P +++      L+    T+ D +S  L  +G   +    ++  +++
Sbjct: 150 Q-----PASQKNPNPYLAIARHE--LTIDLATVCDRMSGLLKMNGHGYLVHRPDRLTEIL 202

Query: 237 RIFESRKL 244
                 +L
Sbjct: 203 ATLADHRL 210


>gi|71282574|ref|YP_267298.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea
           34H]
 gi|123633940|sp|Q489G6|PRMA_COLP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|71148314|gb|AAZ28787.1| ribosomal protein L11 methyltransferase [Colwellia psychrerythraea
           34H]
          Length = 293

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 17/152 (11%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDV--VRILDLGT 106
           +  RL +       P PE   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 109 FGERLWVCPSWRDVPDPEAVNVMLDPGLAFGTGTHPTTALCLTWLDGLDLQDKTVVDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + LA LK     K +G+DI  +AL+ + +NA  N VS+R +          E   D
Sbjct: 169 GSGILSLAALKLGAK-KVIGIDIDPQALQASLANAERNNVSDRLELYLPK--DQPEFKAD 225

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           V+V+N        +  + +E       ++L G
Sbjct: 226 VVVANILAGPLRELAPVIIEYVGDKGLLALSG 257


>gi|262166369|ref|ZP_06034106.1| ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM223]
 gi|262026085|gb|EEY44753.1| ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           VM223]
          Length = 387

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 35/187 (18%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  +     +   +DLG G G + + L + +P  K   VD S  A   A+ N 
Sbjct: 226 DLGARFMLEHLPADPALEDFIDLGCGNGVLSVRLGQLNPQAKITCVDESFMATASAQQNL 285

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           + N        + ++           ++V NPP+ +   +             I+     
Sbjct: 286 LDNLGERDIQCITNNCLDGFPAQSSSMVVCNPPFHQQQTITD----------HIAW---- 331

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                   +       L K G   V     +GY+  V + R+F       V        N
Sbjct: 332 -------QMFCDSKHVLRKGGKLWVIGNRHLGYD--VKLARLF---GKSQVRVI---ANN 376

Query: 257 DRVLLFC 263
            + ++  
Sbjct: 377 SKFVILQ 383


>gi|262170738|ref|ZP_06038416.1| ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           MB-451]
 gi|261891814|gb|EEY37800.1| ribosomal RNA small subunit methyltransferase C [Vibrio mimicus
           MB-451]
          Length = 387

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 35/187 (18%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  +     +   +DLG G G + + L + +P  K   VD S  A   A+ N 
Sbjct: 226 DLGARFMLEHLPADPALEDFIDLGCGNGVLSVRLGQLNPQAKITCVDESFMATASAQQNL 285

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           + N        + ++           ++V NPP+ +   +             I+     
Sbjct: 286 LDNLGERDIQCITNNCLDGFPAQSSSMVVCNPPFHQQQTITD----------HIAW---- 331

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                   +       L K G   V     +GY+  V + R+F       V        N
Sbjct: 332 -------QMFCDSKHVLRKGGKLWVIGNRHLGYD--VKLARLF---GKSQVRVI---ANN 376

Query: 257 DRVLLFC 263
            + ++  
Sbjct: 377 SKFVILQ 383


>gi|258627315|ref|ZP_05722099.1| Ribosomal RNA large subunit methyltransferase G [Vibrio mimicus
           VM603]
 gi|258580353|gb|EEW05318.1| Ribosomal RNA large subunit methyltransferase G [Vibrio mimicus
           VM603]
          Length = 387

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 35/187 (18%)

Query: 83  DSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D    F L  +     +   +DLG G G + + L + +P  K   VD S  A   A+ N 
Sbjct: 226 DLGARFMLEHLPADPALEDFIDLGCGNGVLSVRLGQLNPQAKITCVDESFMATASAQQNL 285

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           + N        + ++           ++V NPP+ +   +             I+     
Sbjct: 286 LDNLGERDIQCITNNCLDGFPAQSSSMVVCNPPFHQQQTITD----------HIAW---- 331

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVE----IGYNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                   +       L K G   V     +GY+  V + R+F       V        N
Sbjct: 332 -------QMFCDSKHVLRKGGKLWVIGNRHLGYD--VKLARLF---GKSQVRVI---ANN 376

Query: 257 DRVLLFC 263
            + ++  
Sbjct: 377 SKFVILQ 383


>gi|257439919|ref|ZP_05615674.1| methyltransferase [Faecalibacterium prausnitzii A2-165]
 gi|257197647|gb|EEU95931.1| methyltransferase [Faecalibacterium prausnitzii A2-165]
          Length = 409

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 25/130 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L   K     +    DIS +A+ +A+ NA  N ++   D L  D F  
Sbjct: 239 VLDCFTHTGSFALNAAK-GGAARVTAADISAEAIAMAQRNAQRNNLT-NMDFLCEDTFEL 296

Query: 161 VE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         +D I+ +PP                           + +  Y+ I     
Sbjct: 297 LPRLEKEGHPYDFIILDPPAFTKARRTV-----------------ENAMRGYKEINYRAM 339

Query: 215 RHLNKDGLCS 224
           + L + G  +
Sbjct: 340 KLLPRGGYLA 349


>gi|83952776|ref|ZP_00961506.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius
           nubinhibens ISM]
 gi|83835911|gb|EAP75210.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius
           nubinhibens ISM]
          Length = 410

 Score = 62.0 bits (150), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 26/143 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++       ++     +R+LD+G G G + L L ++    +  G+ +S +   +A   A 
Sbjct: 161 EAKKHHIARKLLIEPGMRVLDIGCGWGGMGLTLARDY-GAEVTGITLSTEQHAMANRRAE 219

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+++R   L +D +  + G FD IVS                V  F+          G
Sbjct: 220 EAGLAQRAKFLLTD-YRDISGEFDRIVS----------------VGMFE--------HVG 254

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           + HY T    + + L  +G+  +
Sbjct: 255 VPHYETYFRSLRQLLTPEGVALI 277


>gi|332311913|gb|EGJ25008.1| Ribosomal protein L11 methyltransferase [Listeria monocytogenes
           str. Scott A]
          Length = 338

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 136 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 195

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 196 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 254

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 255 NNLLQDINKTDVDIVVAN---ILAEVILLFPEDVYR-----ALKPG--GIFIASGIIEDK 304

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 305 AKVVEEALKKAG-LVIEKMEQQGDWV-AIISKRG 336


>gi|84685294|ref|ZP_01013192.1| Cyclopropane-fatty-acyl-phospholipid synthase [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666451|gb|EAQ12923.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacterales
           bacterium HTCC2654]
          Length = 411

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 59  DFYNVRLTLSSDT---FEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAV 111
           + Y++ L         +  RP+  L  D A       I  +      +++LD+G G G +
Sbjct: 128 ELYDLFLDADRQYSCAYFARPDMTL--DEAQEAKKHHIAHKLRIEPGMKVLDIGCGWGGM 185

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            L L ++      VGV +S +   IA   A   G+S+R D    D +  V   FD IVS
Sbjct: 186 ALTLARDY-GAHVVGVTLSKEQHAIAVKRAQDAGLSDRIDIRLQD-YRDVTESFDRIVS 242


>gi|218893724|ref|YP_002442593.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa LESB58]
 gi|226712962|sp|B7V0H2|RSMC_PSEA8 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|218773952|emb|CAW29766.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa LESB58]
          Length = 332

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 23/127 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G G +  AL +  P  +   +D+   A+E ++     NG+    + + +D
Sbjct: 191 PGGHLLDFGCGAGVLGAALKRRYPASRLTLLDVDAFAVESSRLTLAANGLDG--EVIAAD 248

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                      IVSNPP+ + V  D    E                      +    + H
Sbjct: 249 GIDGAPRELAAIVSNPPFHQGVHTDYQASE---------------------RLLQRAAEH 287

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 288 LAPGGEL 294


>gi|88800046|ref|ZP_01115616.1| hypothetical protein MED297_16594 [Reinekea sp. MED297]
 gi|88777172|gb|EAR08377.1| hypothetical protein MED297_16594 [Reinekea sp. MED297]
          Length = 713

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 70/201 (34%), Gaps = 33/201 (16%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y V L ++   +    +T L +D          E     R+L+L   TGA   A      
Sbjct: 517 YGVTLKVNLHDYL---DTGLFLDHR-NMRKKVQETARGKRVLNLFCYTGAFT-AHAYAGG 571

Query: 121 FFKGVGVDISCKALEIAKSNAVTNG--VSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175
                 VD+S   L  AK N   NG         + SD   W S  +  FD+I+ +PP  
Sbjct: 572 AASTTSVDLSKTYLAWAKDNLQLNGGKAGPNHRFIHSDCLQWLSESKDTFDLIIMDPPTF 631

Query: 176 ESVIVDCLGLEV-RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
            +       L+V RD +                 + D   + L+ DG+           +
Sbjct: 632 SNSARMKDTLDVQRDHE----------------FLVDHAMKLLSPDGVLIF------SNN 669

Query: 235 VVRIFESRKLFLVNAFKDYGG 255
             + +   +L+   A +D  G
Sbjct: 670 YRKFYLDDRLYEAYAVQDVTG 690


>gi|218889095|ref|YP_002437959.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
           LESB58]
 gi|254237410|ref|ZP_04930733.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126169341|gb|EAZ54852.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|218769318|emb|CAW25078.1| putative SAM-dependent methyltransferase [Pseudomonas aeruginosa
           LESB58]
          Length = 398

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 221 GKRVLDLFSYIGGWGIQ-AAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGDV 279

Query: 158 FSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F ++      +  FDV++++PP       D                   +G + YR + +
Sbjct: 280 FEALRELKAADERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLNE 322

Query: 212 GVSRHLNKDGLCS 224
              R L+KDG+  
Sbjct: 323 QAMRLLSKDGILV 335


>gi|330504880|ref|YP_004381749.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
 gi|328919166|gb|AEB59997.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas mendocina NK-01]
          Length = 331

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + +      F         +D   A  L  +++     ILD G G G +  AL +  P  
Sbjct: 162 LEIVTLPGVFAHGR-----LDRGSALLLEHLDELPNGHILDFGCGAGVLGAALKRRYPDS 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           +   +D+   ALE ++     NG+S     +      S       IVSNPP+ + V  D 
Sbjct: 217 ELSLLDVDAFALESSRLTLARNGLSAN--LIAGIGIESAPEGLSAIVSNPPFHQGVHTDY 274

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
              E                      +    ++HL K G  
Sbjct: 275 QASE---------------------NLLSQAAQHLIKGGEL 294


>gi|218439584|ref|YP_002377913.1| methyltransferase type 12 [Cyanothece sp. PCC 7424]
 gi|218172312|gb|ACK71045.1| Methyltransferase type 12 [Cyanothece sp. PCC 7424]
          Length = 399

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 67/173 (38%), Gaps = 39/173 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   +   R+ +RILD G GTG     L+  +P  + VG+D+S KALEIA+  +  
Sbjct: 41  AAYNFCTRQKPSRENIRILDAGCGTGVGTEYLILLNPQAEIVGIDLSEKALEIAQERSRR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           +GVS +      F  L+ +  S + G FD+I          ++  L   V+         
Sbjct: 101 SGVSAKHEASVSFHHLKLEEASQLPGEFDLINCV------GVLHHLPDPVKG-------- 146

Query: 198 GGIDGLSHYRTIADGVSRHLNKDG----LCSVEIGYNQ---KVDVVRIFESRK 243
                          ++  L   G        EIG  +       + + +  K
Sbjct: 147 ------------IQALASKLAPGGIMHIFVYSEIGRWEIQLMQRAIALLQGNK 187


>gi|103485985|ref|YP_615546.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingopyxis
           alaskensis RB2256]
 gi|98976062|gb|ABF52213.1| cyclopropane-fatty-acyl-phospholipid synthase [Sphingopyxis
           alaskensis RB2256]
          Length = 428

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT---L 153
              RILD+G G G + + L +     + +G+ +S + L +A+  A   GV++R       
Sbjct: 181 PGQRILDIGCGWGGMAITLAQ-LEAVEVLGITLSEEQLVLARERAAAAGVADRVTFELID 239

Query: 154 QSDWFSSVEGLFDVIVS 170
             D  +   G FD IVS
Sbjct: 240 YRDLAAREAGRFDRIVS 256


>gi|194882895|ref|XP_001975545.1| GG20499 [Drosophila erecta]
 gi|190658732|gb|EDV55945.1| GG20499 [Drosophila erecta]
          Length = 305

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 30/184 (16%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +++Y++ +  +  +  P    R    L ++  +            +R +D+G G+  +  
Sbjct: 66  KEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEPL-----NLQDIRGIDIGCGSSCIYS 120

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWFSSVEGLFD------ 166
            L  +   +  + ++   + +E A  N   N +    +   Q+D  +  +G F+      
Sbjct: 121 LLGAKKNGWHMLALESKPQNIEYAIENVKKNRLESLIEVYAQADKTNIFKGYFEQDQRMS 180

Query: 167 ---VIVSNPPYIESVIVDCLGLEVRDFD----PRISLDGGIDGL-------SHYRTIADG 212
                + NPP+ +S + +  G   R+ +    P  +  G  + L          + I D 
Sbjct: 181 VYQFCLCNPPFFDSNLPNPFGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDE 240

Query: 213 VSRH 216
              H
Sbjct: 241 SLEH 244


>gi|88858407|ref|ZP_01133049.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas tunicata D2]
 gi|88820024|gb|EAR29837.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas tunicata D2]
          Length = 292

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P    +L+D  LAF           L  +E  D+    ++D G 
Sbjct: 108 FGERLWICPSWREIPDPTAVNVLLDPGLAFGTGTHATTALCLEWLESLDLTGKTVVDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +ALE +  NA  NGV+ + +          E + D
Sbjct: 168 GSGILGIA-AIKLGAARVIGIDIDPQALEASLDNAQRNGVAHQLEVYLPQ--DQPEFMAD 224

Query: 167 VIVSN 171
           V+V+N
Sbjct: 225 VMVAN 229


>gi|146293803|ref|YP_001184227.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           putrefaciens CN-32]
 gi|145565493|gb|ABP76428.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           putrefaciens CN-32]
          Length = 417

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+     G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEQEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +S++   L  D + ++ G +D +VS        +++ +G E         L G       
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS------IEMIEAVGHEY--------LAG------F 276

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           ++ +A      L  +G   +
Sbjct: 277 FKKLAS----LLKPNGRLLL 292


>gi|330993924|ref|ZP_08317854.1| Cyclopropane-fatty-acyl-phospholipid synthase [Gluconacetobacter
           sp. SXCC-1]
 gi|329758870|gb|EGG75384.1| Cyclopropane-fatty-acyl-phospholipid synthase [Gluconacetobacter
           sp. SXCC-1]
          Length = 424

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 3/116 (2%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLA 114
           +R F +  +  S   F    ET     +A    L       R  + +LD+G G G + L 
Sbjct: 132 YRHFLDEDMQYSCGYFPTGTETLAQAQAAKKHHLAAKLHLVRPGLGVLDVGCGWGGMALT 191

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L ++       G+ +S + L +A+  A   G+  R      D+ +     +D I+S
Sbjct: 192 LARDY-GAVVTGITLSHEQLLVARRRAREAGLEHRVRFELMDYRAVAPRQYDRIIS 246


>gi|310793786|gb|EFQ29247.1| hypothetical protein GLRG_04391 [Glomerella graminicola M1.001]
          Length = 258

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 74/220 (33%), Gaps = 39/220 (17%)

Query: 69  SDTFEPRPETELLVDSALAFS----------LPRIEKRDVVRILDLGTGTGAVCLALLKE 118
              +EP  ++ LL+D+  A S             +       ++++GTG+G V   +   
Sbjct: 13  ERVYEPAEDSYLLLDTLSAPSETEFLTSRFGASSLPTPAAPLVVEIGTGSGVVIAFIAAH 72

Query: 119 SPFFKGVGVDI---------SCKALEIAKSNAVTNGVS----ERFDTLQSDWFSSVEGL- 164
           +    G    +         +CKA +     A     +            D  + +    
Sbjct: 73  ARTLFGTACVLTLGVDLNGHACKATDCTVLRARAENPTTSSPAWLGAAMGDLTAPLRERS 132

Query: 165 FDVIVSNPPYIESVIVDCLG-------LEVRDFDPRISL-----DGGIDGLSHYRTIADG 212
            DV++ NPPY+ S  +            E   FD    L      GG DG+     + + 
Sbjct: 133 VDVLIFNPPYVPSPELPAQASAALVANGEKTTFDEDSYLLSLSYAGGRDGMETTDRLIET 192

Query: 213 VSRHLNKDGLCSVEI-GYNQKVDVVRIFES--RKLFLVNA 249
           + R L++ G   + +   N+  +V    E+       V  
Sbjct: 193 MPRVLSERGCAYILLCAQNRPEEVKARIEAFGAGWRAVTV 232


>gi|312880708|ref|ZP_07740508.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260]
 gi|310783999|gb|EFQ24397.1| Methyltransferase type 11 [Aminomonas paucivorans DSM 12260]
          Length = 218

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 25/140 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNG 145
             +L  +     ++ LDLG G G +  AL   SP   +  GVD+S   L++A   A    
Sbjct: 36  ERALGGLVLAPGMKALDLGCGPGGLSFALGARSPVDTQIHGVDLSVDQLDLASRRAGRVS 95

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            S RF     D     +G FD++++      S+ +     EVR                 
Sbjct: 96  CSLRFHRCSMDELPFPDGEFDLVMT------SMALHETPPEVR----------------- 132

Query: 206 YRTIADGVSRHLNKDGLCSV 225
            R     V+R L   G   +
Sbjct: 133 -RRTVGEVARVLRDGGRFLL 151


>gi|254467260|ref|ZP_05080671.1| methyltransferase small [Rhodobacterales bacterium Y4I]
 gi|206688168|gb|EDZ48650.1| methyltransferase small [Rhodobacterales bacterium Y4I]
          Length = 255

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 65/175 (37%), Gaps = 19/175 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           ++P       VD  L      +  R    +L+LG G G   L L    P     GV++  
Sbjct: 22  WQPARGYRAGVDPVL--LAAAVPARAGETVLELGCGAGQALLCLGARVPGLALAGVELQA 79

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEV 187
              ++A+ NA  NG +   D  ++D  +  E      F  +++NPPY ++        + 
Sbjct: 80  PYADLARRNAAANGQA--IDVHEADLSALPEALKLRQFHHVIANPPYYKAGAHSQARDDG 137

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
           R    +++L G    L+ +       +R L   G         +   +  +  + 
Sbjct: 138 R----KVAL-GEGTPLADW---IAVAARRLAPKGRL---HMIQRADRLPDMLAAC 181


>gi|90581289|ref|ZP_01237086.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14]
 gi|90437528|gb|EAS62722.1| ribosomal protein L11 methyltransferase [Vibrio angustum S14]
          Length = 294

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P    +L+D  LAF           L  ++ +D+    ++D G 
Sbjct: 109 FGRRLWICPSWREAPEPGAVNVLLDPGLAFGTGTHPTTSLCLEWLDSQDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +A+  ++ NA  NGVS+  +              D
Sbjct: 169 GSGILAIA-ALKLGAAKVIGIDIDPQAILASRDNAERNGVSDNLELYLPQ-DQPQGIQAD 226

Query: 167 VIVSN 171
           V+V+N
Sbjct: 227 VVVAN 231


>gi|66770008|ref|YP_244770.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|66575340|gb|AAY50750.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 358

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 57/199 (28%), Gaps = 40/199 (20%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N   +    +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDVYEAEARALNLARRNLQGSAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D                         +      ++ L   G                +  
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLL-------------LVA 316

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +R L       D  G  RV
Sbjct: 317 NRHLPYEQVLNDSFGQVRV 335


>gi|16330344|ref|NP_441072.1| hypothetical protein sll1693 [Synechocystis sp. PCC 6803]
 gi|1652833|dbj|BAA17752.1| sll1693 [Synechocystis sp. PCC 6803]
          Length = 440

 Score = 62.0 bits (150), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 32/156 (20%)

Query: 74  PRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           P+   +LL + +L  +  R + +     +   +LD+  GTGA  L +   +P  K VG+D
Sbjct: 30  PKDNVKLLYEGSLVTARYRRDGKVITDLENRVMLDVACGTGATTLTMALANPGAKVVGID 89

Query: 129 ISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           IS ++++IA+     + +    F  L  +    +   FD       YI +  +  L  ++
Sbjct: 90  ISPESIKIAEERLQYHKIDNSEFHVLALEDLDQLGQKFD-------YISASDILYLLPDL 142

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                 ++L                +   L  DG+ 
Sbjct: 143 T-----LAL--------------QQLRAILKPDGII 159


>gi|330830946|ref|YP_004393898.1| ribosomal protein L11 methyltransferase [Aeromonas veronii B565]
 gi|328806082|gb|AEB51281.1| Ribosomal protein L11 methyltransferase [Aeromonas veronii B565]
          Length = 292

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 106 FGERLWICPSWRDVPNPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVVDFGC 165

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF 165
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGV+++ +  L +D    VE   
Sbjct: 166 GSGILGIA-ALKLGAARVIGIDIDPQAIQASRDNAARNGVADQIELYLPADQPQDVEA-- 222

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 223 DVVVAN 228


>gi|297544803|ref|YP_003677105.1| hypothetical protein Tmath_1380 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842578|gb|ADH61094.1| protein of unknown function Met10 [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 391

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+E+AK N   NG   R + +  + F
Sbjct: 218 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEMAKKNVELNGYQGRCNFVCDNAF 276

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD I+ +PP             V+D     +L G       Y+ I   
Sbjct: 277 DILRRYDKEGRKFDTIILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 319

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 320 ALKILREGGFLI 331


>gi|237654104|ref|YP_002890418.1| ribosomal protein L11 methyltransferase [Thauera sp. MZ1T]
 gi|237625351|gb|ACR02041.1| ribosomal protein L11 methyltransferase [Thauera sp. MZ1T]
          Length = 300

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T L ++       P         +LD G G+G + +A  K       +G+DI  KA+E
Sbjct: 151 PTTRLCLEWLCEVVTPGCS------VLDYGCGSGILGIAAAKLGAGA-VLGIDIDEKAVE 203

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            A+ NA  N  + R           V   FD++V+N
Sbjct: 204 AARDNAARNHAAVRLQ----HSAVPVGDTFDLVVAN 235


>gi|217964383|ref|YP_002350061.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           HCC23]
 gi|254783309|sp|B8DE40|PRMA_LISMH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|217333653|gb|ACK39447.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           HCC23]
 gi|307571052|emb|CAR84231.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           L99]
          Length = 314

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 63/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N        V  L  E                   YR      
Sbjct: 231 NNLLQDINKTNVDIVVAN----ILAEVILLFPE-----------------DVYRA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|213967188|ref|ZP_03395337.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato T1]
 gi|301381077|ref|ZP_07229495.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato Max13]
 gi|302061548|ref|ZP_07253089.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato K40]
 gi|302133231|ref|ZP_07259221.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213928030|gb|EEB61576.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato T1]
          Length = 332

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   +  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLEAQV--VTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLKKARQHLKSGGEL 294


>gi|90407656|ref|ZP_01215836.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
 gi|90311247|gb|EAS39352.1| 16S RNA G1207 methylase RsmC [Psychromonas sp. CNPT3]
          Length = 384

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 70/178 (39%), Gaps = 36/178 (20%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           + +  +   D   I+DLG G G V +A L+     K   +D S  A++ A+ N + N   
Sbjct: 228 YLMDNLPDGDFSNIVDLGCGNGIVGMAALEYYADSKVTFIDESYMAVDSARINTLKNFEE 287

Query: 148 ERFDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           ER D  +    + + G      D+I+ NPP+ +  ++             I+        
Sbjct: 288 ERSDNARFVVNNGLVGFKAASHDLILCNPPFHQQQVITD----------HIAW------- 330

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF-------ESRKLFLVNAFK 251
               ++ +     L + G   + +G      +  + RIF       E++K  ++ A K
Sbjct: 331 ----SMFNDAHFCLQEGGELII-VGNRHLDYQDKLTRIFGDCELLAENKKFVILRAIK 383


>gi|167037750|ref|YP_001665328.1| hypothetical protein Teth39_1338 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040444|ref|YP_001663429.1| hypothetical protein Teth514_1811 [Thermoanaerobacter sp. X514]
 gi|256752474|ref|ZP_05493332.1| protein of unknown function Met10 [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|166854684|gb|ABY93093.1| protein of unknown function Met10 [Thermoanaerobacter sp. X514]
 gi|166856584|gb|ABY94992.1| protein of unknown function Met10 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256748676|gb|EEU61722.1| protein of unknown function Met10 [Thermoanaerobacter ethanolicus
           CCSD1]
          Length = 415

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+E+AK N   NG  ER + +  + F
Sbjct: 242 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEMAKKNVELNGYQERCNFVCDNAF 300

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD ++ +PP             V+D     +L G       Y+ I   
Sbjct: 301 DLLRKYDKENRKFDTVILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 343

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 344 ALKILREGGFLI 355


>gi|303248941|ref|ZP_07335188.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
 gi|302489664|gb|EFL49600.1| Methyltransferase type 11 [Desulfovibrio fructosovorans JJ]
          Length = 255

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 37/173 (21%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           RIEK DV R+LD+G G G     L +  P  +  G+D S + +  A+            D
Sbjct: 25  RIEKEDVKRVLDVGCGPGNSSEVLARRFPRARVRGIDSSPEMIGSARQ------AHSEID 78

Query: 152 TLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               D      S+EG +DV+ SN               V D                 + 
Sbjct: 79  FELCDAGKELESLEGGYDVVFSN----------ACIQWVPDH----------------KA 112

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLL 261
           +   +   L   G+ +V+I  NQ   + +I     L   +A+KD   N RV  
Sbjct: 113 LLKNMMGLLAPGGVLAVQIPMNQHEPIHKIIGE--LVTSDAWKDAFPNPRVFH 163


>gi|297708304|ref|XP_002830909.1| PREDICTED: LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase
           homolog A-like [Pongo abelii]
          Length = 625

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 55/138 (39%), Gaps = 16/138 (11%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RI 101
           +   +  + G R    D   +   +S   F    +        L   +    +RD    +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQRDAGSTV 436

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQS 155
           LD+  G  A+ LAL ++    + +GV++  +A+E A+ NA  N +S       R + L  
Sbjct: 437 LDVCCGFRAIGLALARKVK--RVIGVELCPEAVEDARVNAQDNELSNVEFHCGRAEDLVP 494

Query: 156 DWFSSVEGLFDVIVSNPP 173
              S +     V + +PP
Sbjct: 495 ALVSRLASQHLVAILDPP 512


>gi|237649844|ref|ZP_04524096.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CCRI 1974]
 gi|237820771|ref|ZP_04596616.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CCRI 1974M2]
          Length = 316

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ IA+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRIAQENIELNTGMENIHVAAG 227

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 228 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 258

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 259 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 290


>gi|182414517|ref|YP_001819583.1| putative SAM-dependent methyltransferase [Opitutus terrae PB90-1]
 gi|177841731|gb|ACB75983.1| putative SAM-dependent methyltransferase [Opitutus terrae PB90-1]
          Length = 408

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 78/220 (35%), Gaps = 36/220 (16%)

Query: 19  SHQVIVDP-DSVLDDRQRFFLTNAIVRSLKHESIHRILG--------WRDFYNVRLTLSS 69
              +I D  D++L   +  F  +A +R L+   +             W     +   L  
Sbjct: 151 RSTLISDSLDALLSPDEIIFRNDAPIRRLEGLPLEVRTRSGRPWEPRWVKVDGLDYWLD- 209

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              +   +T   +D                R+LD     GA  L   +     K +G+D 
Sbjct: 210 --LQGGQKTGFYLDQRAQHGRVAAYC-AGKRVLDAFCNQGAFALHAARAGA-SKVLGLDS 265

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQ-SDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184
           +  A+  A+ NA  N ++  F      DWF++     E L+DVI+ +PP           
Sbjct: 266 AEDAVAAARRNATQNRLNAEFGVANVFDWFNAPGRAAEPLWDVIILDPPPFAKS------ 319

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                   + +L+G + G   Y+ I     + L   G+ +
Sbjct: 320 --------KSALEGALRG---YKEINLRAMQRLAPGGVLA 348


>gi|319408812|emb|CBI82469.1| ribosomal protein L11 methyltransferase [Bartonella schoenbuchensis
           R1]
          Length = 289

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 27/166 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +   +    LDLGTG+G + + +    P    +  D    A++IA+ N   NG
Sbjct: 139 LEMITKIMRTENPQNALDLGTGSGVLAIGMAMLKP-ISILASDNDPIAVQIAQHNIKLNG 197

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V +    + +  F+      D I S  P+      D +   +           G      
Sbjct: 198 VKKYITAITATGFNH-----DTIASRAPF------DLIVANIL---------AGP----- 232

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
              +A  +++ L K+G   +  I   Q   V++ +  + L  +  +
Sbjct: 233 LIELAQEMTQALQKNGSIILSGILEEQHDHVLKAYVKQGLQHIETY 278


>gi|228995075|ref|ZP_04154823.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
 gi|228764670|gb|EEM13471.1| Methyltransferase type 11 [Bacillus pseudomycoides DSM 12442]
          Length = 207

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 41/206 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   LS   ++                + ++      +ILD+GTG+G++ + L K  P
Sbjct: 1   MYIAFILSYSVYQFAAFGGNYQSKIHDLIVAKVNWDGKGKILDIGTGSGSLIIKLAKTFP 60

Query: 121 FFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
                G        + S       + NA   GVS+R D L++        +  FD+IVS 
Sbjct: 61  KSFLTGIDYWGGNWEYSK---AQCQQNAEIEGVSDRVDFLKASAAELPFNDDEFDIIVSC 117

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------ 225
             +           EV+D + +               +     R L   G          
Sbjct: 118 LTF----------HEVKDRENKT-------------EVIKEALRVLKPGGEFVFLDLFMD 154

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFK 251
           E  +  + +++ + +   +  +N++K
Sbjct: 155 EKIFGDEKELLNVLKKHGVSELNSYK 180


>gi|118580724|ref|YP_901974.1| RNA methyltransferase [Pelobacter propionicus DSM 2379]
 gi|118503434|gb|ABK99916.1| 23S rRNA m(5)U-1939 methyltransferase [Pelobacter propionicus DSM
           2379]
          Length = 493

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
             H +        V L +S  +F    R    L+ +    ++     +     +LDL  G
Sbjct: 295 PKHHLT--ERIGEVSLMISPRSFLQVNRDGACLIYERVAEWARLTGRE----TVLDLYCG 348

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--- 164
            G + L L + +   + +GV++   A+E A+ NA  NG+S        D    +E L   
Sbjct: 349 IGGIALTLARRAR--RVIGVEVVEAAVEDARRNARMNGISNCV-FQAGDVAEQLEELAED 405

Query: 165 ---FDVIVSNPP 173
               DV+V NPP
Sbjct: 406 GEGVDVVVLNPP 417


>gi|325958449|ref|YP_004289915.1| hypothetical protein Metbo_0692 [Methanobacterium sp. AL-21]
 gi|325329881|gb|ADZ08943.1| protein of unknown function Met10 [Methanobacterium sp. AL-21]
          Length = 340

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 61/212 (28%), Gaps = 51/212 (24%)

Query: 51  IHRILGW-------RDFYN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           +  I G        ++F + + L +    F PR         A        +  D   I+
Sbjct: 146 LEHIAGEDVSETVHKEFGSRIMLDVRRVYFSPR--------LATERRRVAEQVEDGELII 197

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFS 159
           D+  G G   + + K+    K   VDI+  A    K N   N +      +  D     +
Sbjct: 198 DMFAGVGPFPVTIAKDH-DVKIYAVDINPAAHHYIKRNIEINKLKGEIIPILGDVKTVLN 256

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +    D I+ N P                            G +            L  
Sbjct: 257 DLNLSADRIIMNLP----------------------------GTAC--DFLSTAINSLKS 286

Query: 220 DGLC-SVEIGYNQKVDVVRIFESRKLFLVNAF 250
            G+    E   + KV V RI E+ K   V   
Sbjct: 287 GGVLHYYEFASDYKVPVERIVETAKPRNVEIL 318


>gi|302389423|ref|YP_003825244.1| SAM-dependent methyltransferase [Thermosediminibacter oceani DSM
           16646]
 gi|302200051|gb|ADL07621.1| SAM-dependent methyltransferase [Thermosediminibacter oceani DSM
           16646]
          Length = 390

 Score = 61.7 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +L+    TG+  L+  +     K +  D S  A+E+A+ NAV NG+++  +  + +
Sbjct: 215 KGAEVLECFCYTGSFALSAARYGAK-KVLAFDSSKDAVELARENAVLNGLNDICEFQEGN 273

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +         FDV++ +PP                     +L+  I G   Y+ I 
Sbjct: 274 AFDVLRQFYDSRKKFDVVILDPPAFAKNKK--------------ALESAIRG---YKEIN 316

Query: 211 DGVSRHLNKDGLCS 224
               + L   G   
Sbjct: 317 LRSLKILKPGGFLI 330


>gi|226525311|gb|ACO70910.1| conserved hypothetical protein [uncultured Verrucomicrobia
           bacterium]
          Length = 187

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 28/136 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL  G+GA+ L             V+    A+     N     +S       +D
Sbjct: 40  PGARVLDLFAGSGALGLE-ALSRGAASVTFVEKDRAAVATIHRNFEKTRLSGTVQA--AD 96

Query: 157 WFSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            FS ++       FD+I+++PPY ++        E+ + +   +L               
Sbjct: 97  VFSFLDRFAAPESFDLILADPPYSKAPGERDFAPELLNNE---AL--------------- 138

Query: 212 GVSRHLNKDGLCSVEI 227
              R L   G   +E 
Sbjct: 139 --RRALAPGGTLVLEH 152


>gi|283853586|ref|ZP_06370823.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B]
 gi|283571011|gb|EFC19034.1| ribosomal L11 methyltransferase [Desulfovibrio sp. FW1012B]
          Length = 286

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 60/176 (34%), Gaps = 33/176 (18%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   A A            R LDLGTG+G + + L K      GVG+DI  +A+  
Sbjct: 131 PTTALCLEAFADCFAAGRIGPGNRFLDLGTGSGILGIGLCKL--GLTGVGLDIDPQAVWC 188

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A  N   N V            S  EG +FD++ +N           L        P ++
Sbjct: 189 AAENLRRNHVEAAMGLAVGGAGSLAEGAVFDIVAAN----------ILAA------PLVA 232

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
           + G              + RH+   G+  +  I   Q  DV   + +  L      
Sbjct: 233 MAG-------------RLVRHVAPGGVLVLSGILTTQASDVAAAYRAAGLPEPETR 275


>gi|328542979|ref|YP_004303088.1| ribosomal protein L11 methyltransferase [polymorphum gilvum
           SL003B-26A1]
 gi|326412725|gb|ADZ69788.1| Ribosomal protein L11 methyltransferase [Polymorphum gilvum
           SL003B-26A1]
          Length = 296

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L      + +R    ILDLGTGTG + +A  K +   +    DI   A   A+ NA 
Sbjct: 137 EGCLREIDRLLARRRYANILDLGTGTGVLAIAAAKLARQ-RVFATDIDPVATRTARENAR 195

Query: 143 TNGVSERFDT-----LQSDWFSSVEGLFDVIVSN 171
            NGVS    T     +    F+ + G FD++++N
Sbjct: 196 LNGVSTLVRTFTVPGVDHRLFAEL-GPFDLVIAN 228


>gi|107099338|ref|ZP_01363256.1| hypothetical protein PaerPA_01000350 [Pseudomonas aeruginosa PACS2]
          Length = 398

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 24/133 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D 
Sbjct: 221 GKRVLDLFSYIGGWGIQ-AAAFGASEVMCVDASAFALDGVERNAALNGVAEKVACVEGDV 279

Query: 158 FSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F ++      +  FDV++++PP       D                   +G + YR + +
Sbjct: 280 FEALRELKAADERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLNE 322

Query: 212 GVSRHLNKDGLCS 224
              R L+KDG+  
Sbjct: 323 QAMRLLSKDGILV 335


>gi|170114121|ref|XP_001888258.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636747|gb|EDR01039.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 240

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 62/191 (32%), Gaps = 56/191 (29%)

Query: 96  RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTL 153
           ++   ++DLG+G G  V LA  K  P  + VG+D+S + +++A+ NA   N        +
Sbjct: 35  KEGEYVVDLGSGGGFDVFLAAAKVGPTGQVVGLDMSSEMIDLARRNAAKQNLKPPHVAFV 94

Query: 154 QSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           Q+      F    G  D I+SN       +V+ L    +                    +
Sbjct: 95  QASLDKAAFPVEPGSIDCILSN------CVVNLLQPAGKVN------------------L 130

Query: 210 ADGVSRHLNKDGLCSV-----------EI------------GYNQKVDVVRIFESRKLFL 246
              V R L   G   +           EI            G  Q  +  ++F       
Sbjct: 131 LKEVYRVLRPGGRIVLDDILARDTLPDEIKQDLNAYVACISGAIQVHEYKQLFLESGFTD 190

Query: 247 VNAFK---DYG 254
           V       D  
Sbjct: 191 VLFVDTKSDLN 201


>gi|115435048|ref|NP_001042282.1| Os01g0193600 [Oryza sativa Japonica Group]
 gi|9988445|dbj|BAB12711.1| putative RNA methyltransferase [Oryza sativa Japonica Group]
 gi|10934074|dbj|BAB16852.1| putative RNA methyltransferase [Oryza sativa Japonica Group]
 gi|113531813|dbj|BAF04196.1| Os01g0193600 [Oryza sativa Japonica Group]
 gi|215697095|dbj|BAG91089.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 557

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      ILDL  GTG + L L + + 
Sbjct: 366 RGLTFQISANSFFQTNTKQADVLYKLIGESAGLKGDGSEIILDLFCGTGTIGLTLARRAK 425

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  AK NA  NG+S     +Q D       F       D+I+S+P
Sbjct: 426 --HVYGYEVVPEAIADAKKNAKLNGIS-NATFVQGDLNKINETFGKEFPKPDIIISDP 480


>gi|295111256|emb|CBL28006.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Synergistetes bacterium SGP1]
          Length = 217

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 49/144 (34%), Gaps = 25/144 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNA 141
           +     ++  +   +  R LDLG G G +  AL + SP     VG DIS   LE A+  A
Sbjct: 35  ERFYRQAVGDLRLGEGGRALDLGCGPGGLSYALAETSPASASIVGADISDDQLECARRGA 94

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                   F     D     +G FD++++      S+ +      VR             
Sbjct: 95  GAFACKVEFLKASMDELPFPDGHFDLVMT------SMALHETPPAVR------------- 135

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                R      +R L   G   +
Sbjct: 136 -----RAAIAETARLLRPGGTFLL 154


>gi|28868361|ref|NP_790980.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|81732241|sp|Q887Y4|RSMC_PSESM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|28851598|gb|AAO54675.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|331018085|gb|EGH98141.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 332

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P    V +D+   A   ++    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNDVVMLDVDAFATASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   +  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLEAQV--VTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLKKARQHLKSGGEL 294


>gi|307295037|ref|ZP_07574879.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sphingobium
           chlorophenolicum L-1]
 gi|306879511|gb|EFN10729.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sphingobium
           chlorophenolicum L-1]
          Length = 413

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 27/157 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +  +++LD+G G G + L L   +      G+ +S + L++A+  A   GV
Sbjct: 171 AHIAAKLHLKPGMKVLDIGGGWGGMALYL-HRTCGVDVTGITLSEEQLKVARQRAQDAGV 229

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++       D +  +EG FD IVS                V  F+          G   Y
Sbjct: 230 ADHVRFELID-YRDMEGPFDRIVS----------------VGMFE--------HVGTRDY 264

Query: 207 RTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESR 242
           RT  +     L  DG+  +  IG      +   F  +
Sbjct: 265 RTFYNKCRELLTPDGVMLIHTIGRVDGPGITDAFTQK 301


>gi|288958522|ref|YP_003448863.1| cyclopropane-fatty-acyl-phospholipid synthase [Azospirillum sp.
           B510]
 gi|288910830|dbj|BAI72319.1| cyclopropane-fatty-acyl-phospholipid synthase [Azospirillum sp.
           B510]
          Length = 422

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 70/173 (40%), Gaps = 29/173 (16%)

Query: 57  WRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +R F +  +  S   F EP    +   ++       ++     +R+LD+G G G + L L
Sbjct: 127 YRLFLDRDMQYSCAYFAEPGLSLDEAQEAKKRHIAAKLLIVPGMRVLDIGCGWGGMALYL 186

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNP 172
            + +   +  G+ +S + L +A+  A   G+++R      D+    ++  G FD IVS  
Sbjct: 187 ARHT-GARVTGITLSSEQLTVARQRAEEAGLADRVTFELRDYREFAAAHRGAFDRIVS-- 243

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                         V  F+          G+ HYR   D V   LN DG+  +
Sbjct: 244 --------------VGMFE--------HVGVPHYRDYFDAVRDMLNDDGVALI 274


>gi|289207973|ref|YP_003460039.1| Cyclopropane-fatty-acyl-phospholipid synthase [Thioalkalivibrio sp.
           K90mix]
 gi|288943604|gb|ADC71303.1| Cyclopropane-fatty-acyl-phospholipid synthase [Thioalkalivibrio sp.
           K90mix]
          Length = 412

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 8/104 (7%)

Query: 71  TFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            +  RP+  L  + A     A    ++      R+LD+G G G +   L  E+   +  G
Sbjct: 138 AYFERPDMSL--EEAQQAKCAMLRKKLVLEPGQRVLDIGCGWGGLAFHLA-ENADVQVDG 194

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +S + L +A++ A   G+ +R      D +   +  +D +VS
Sbjct: 195 ITLSREQLRVAQAEAKRRGLDDRVRFFYQD-YREHDDQYDRVVS 237


>gi|116253028|ref|YP_768866.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|166223435|sp|Q1ME53|PRMA_RHIL3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|115257676|emb|CAK08774.1| putative ribosomal protein L11 methyltransferase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 292

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 41/173 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ K       +  DI   A ++A  N   NG
Sbjct: 140 LEVIDSVVRSRPVRNALDLGTGSGVLAIAVRKLR-NIPVLATDIDPIATKVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N                              
Sbjct: 199 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN------------------------------ 228

Query: 202 GLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                R +     +   HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 229 --ILARPLIRMAPKLATHLAPGGSVILSGILAGQRWKVIAAYSGARLRHVKTI 279


>gi|307321078|ref|ZP_07600483.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti AK83]
 gi|306893250|gb|EFN24031.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti AK83]
          Length = 413

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 24/179 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSA----LAFSLPRIEKRDVVRILD 103
           H  LG  DFY  +L L  +        R   E L ++A    L     ++  +  +R+LD
Sbjct: 124 HYDLGN-DFY--KLFLDENMLYSCAYFREPDETL-EAAQRNKLRLLAAKLCLKPGMRVLD 179

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G + L L       + +GV +S +   +A   A   G+++R      D +  VEG
Sbjct: 180 IGCGWGDLALYLA-ALEDVEVLGVTLSREQQALASERARAAGMADRVRFELKD-YRDVEG 237

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            FD IVS    +       +      F    +L    DGL+   +I      H++  G+
Sbjct: 238 PFDRIVS----VGMFEHVGVHHYDEFFKKLNALMP-DDGLAVLHSI-----GHMSPPGM 286


>gi|206901995|ref|YP_002249964.1| methyltransferase [Dictyoglomus thermophilum H-6-12]
 gi|206741098|gb|ACI20156.1| methyltransferase [Dictyoglomus thermophilum H-6-12]
          Length = 395

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+   TG   L  LK     K + VD S  ALE+AK NA  NG  ++ + ++ +
Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGA-SKVIAVDSSSTALEMAKENAKINGFIDKIEFIEEN 275

Query: 157 WFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +         FDV++ +PP       +              LDG + G   Y+ I 
Sbjct: 276 AFDLLRRFHKEGKTFDVVILDPPAFAKSSKN--------------LDGALRG---YKEIN 318

Query: 211 DGVSRHLNKDGLCS 224
               + +   G   
Sbjct: 319 LRAMKIIRDGGFLI 332


>gi|195020688|ref|XP_001985248.1| GH16956 [Drosophila grimshawi]
 gi|193898730|gb|EDV97596.1| GH16956 [Drosophila grimshawi]
          Length = 613

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 32/189 (16%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE-------SIHRILGWRDFYN- 62
           L     L   Q + +     +       T+   + +KH         +  +LG     + 
Sbjct: 315 LSEAEQLELQQELKNFYEQAEQNAEHKCTSLYYQDVKHREAGQMVNPVTHLLGSTHITDT 374

Query: 63  ---VRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
              ++  +S   F         +L   A+  + P  +      +LD+  GTG + LA  +
Sbjct: 375 IQELQFRISPLAFFQINTAGANVLYQQAIDLAAPSKD----TTMLDICCGTGTIALAFAR 430

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RF------DTLQSDWFSSVEGL-----F 165
                + +GV+I   A++ A+ NA  NG++  +F      D ++S    ++ G       
Sbjct: 431 HCK--QVLGVEIVPDAIKDAEYNASANGITNCKFFAGNADDFIKSMVREALYGQEPGKPV 488

Query: 166 DVI-VSNPP 173
           D+I V +PP
Sbjct: 489 DLIAVVDPP 497


>gi|167646665|ref|YP_001684328.1| methyltransferase small [Caulobacter sp. K31]
 gi|167349095|gb|ABZ71830.1| methyltransferase small [Caulobacter sp. K31]
          Length = 305

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 29/127 (22%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF--S 159
           +DLG G G +  A+L      K   VD+  +A+E AK N        R + L +D    +
Sbjct: 170 VDLGCGIGVLAHAILISPKVTKLTLVDLDRRAVEAAKRNV----NDPRVEVLWADARRGA 225

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLSHYRTIADGVSRHLN 218
            +    D +V+NPP+                +      GG D GL   +      +  L 
Sbjct: 226 DLLSGLDFVVTNPPF---------------HE-----AGGEDKGLG--QAFIKSAAAMLR 263

Query: 219 KDGLCSV 225
           K G+  +
Sbjct: 264 KGGVLWI 270


>gi|119384761|ref|YP_915817.1| methyltransferase small [Paracoccus denitrificans PD1222]
 gi|119374528|gb|ABL70121.1| methyltransferase small [Paracoccus denitrificans PD1222]
          Length = 252

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 56/175 (32%), Gaps = 32/175 (18%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL +     +P        D+           R    +L+LG G G   L L    
Sbjct: 9   FLGGRLRI----LQPARGYRAGADAV--MLAAACPARTGESVLELGCGAGVAMLCLGARV 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYI 175
           P  +  G+++     E+A+ NA TN ++   +  Q D         E  FD +++NPPY 
Sbjct: 63  PGLRLAGLELQPSYAELARQNAATNAIAA--ELHQGDLARMPAALREQSFDHVIANPPYF 120

Query: 176 ESVIVDCLGLEVR-DFD----PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       R   +    P                  +   R L   G  ++
Sbjct: 121 IGGSPAPDEGRGRARHEVTPLPLW---------------IEAGLRRLRPGGWITL 160


>gi|293571364|ref|ZP_06682395.1| ribosomal protein L11 methyltransferase [Enterococcus faecium E980]
 gi|291608580|gb|EFF37871.1| ribosomal protein L11 methyltransferase [Enterococcus faecium E980]
          Length = 315

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K          D+   A+  AK N   N V++      +
Sbjct: 174 RGGETLLDVGTGSGVLSIA-AKYLGAKDVYAFDLDEVAVRSAKENMDMNEVAKDVHVSAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +E   DVIV+N                      ++        +    +     R
Sbjct: 233 DLLKGIEIESDVIVAN---------------------ILA--------NIILLMIPDAWR 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L + G   V  I   +K  V+     +   +   F+
Sbjct: 264 LLKQTGTLIVSGIIEEKKQMVLDAMIEQGFIVDQIFQ 300


>gi|213513149|ref|NP_001134384.1| Methyltransferase-like protein 5 [Salmo salar]
 gi|209732866|gb|ACI67302.1| Methyltransferase-like protein 5 [Salmo salar]
          Length = 208

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 6/103 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P +  +    L       +  +   + DLG G G + +            G DI   ALE
Sbjct: 27  PTSPHIAACMLYTIHNTFDDIEGKLVADLGCGCGVLSIGAAMLDAGLCV-GFDIDPDALE 85

Query: 136 IAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPY 174
           I K N+    ++   D +Q D  S    +    FD ++ NPP+
Sbjct: 86  IFKRNSEEFELT-NVDLIQCDMCSLRSHAYAKKFDTVIMNPPF 127


>gi|317502782|ref|ZP_07960888.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM
           15606]
 gi|315666093|gb|EFV05654.1| ribosomal protein L11 methyltransferase [Prevotella salivae DSM
           15606]
          Length = 305

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LD G GTG + +  LK       VG DI   ++E AK NA  N V E  +  Q D   
Sbjct: 171 RVLDCGCGTGILGIVALKYGAKS-VVGYDIDEWSVENAKHNAEINNV-ENIEIYQGDANV 228

Query: 158 FSSVEGLFDVIVSN 171
            + + G+FD++++N
Sbjct: 229 LNHISGVFDIVLAN 242


>gi|254413150|ref|ZP_05026922.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
 gi|196180314|gb|EDX75306.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
          Length = 388

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 33/151 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   +   R  +RILD G GTG     L+  +P    VG+D+S  AL++A+     
Sbjct: 33  AAYSFCTGQKPSRQDIRILDAGCGTGVGTEYLVHLNPQAAVVGIDLSAGALQVAQERCHR 92

Query: 144 NGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G + R +      + +  +EG FD+I                + V    P         
Sbjct: 93  SG-ANRVEFHHLSLYDAQELEGEFDLINC--------------VGVLHHLP--------- 128

Query: 202 GLSHYRTIADGVSRHLNKDG----LCSVEIG 228
                R I     + L   G        E+G
Sbjct: 129 --DPIRGIQALAPK-LAPGGLMHIFVYAELG 156


>gi|148549712|ref|YP_001269814.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida F1]
 gi|229564334|sp|A5W920|RLMG_PSEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|148513770|gb|ABQ80630.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida F1]
          Length = 374

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 48/138 (34%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A    +P  +   VD S  A++ A+ N +      
Sbjct: 223 LPHLPRDLGRARVADLGCGNGVLAIASALANPEAEYTLVDESYMAVQSAQENWLAALGER 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                 +D  + +E    DV++ NPP+ +  +V                     G     
Sbjct: 283 PATFFAADGLAGLEKQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|307272832|ref|ZP_07554079.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0855]
 gi|306510446|gb|EFM79469.1| ribosomal protein L11 methyltransferase [Enterococcus faecalis
           TX0855]
          Length = 315

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+    +  AK N   N ++       
Sbjct: 174 RGGETVLDVGTGSGV--LSIASRYLGAKDVYAYDLDEVVVAAAKENMDLNPIAADVHVSA 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +D    ++   DVIV+N                      ++             + +   
Sbjct: 232 NDLLKGIDHSADVIVAN---------------------ILA--------DIIVLMIEDAW 262

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
           R L +DG   +  I  ++K  V+        
Sbjct: 263 RLLKQDGTFIISGIIEDKKAMVLEALTKVGF 293


>gi|296273668|ref|YP_003656299.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
 gi|296097842|gb|ADG93792.1| methyltransferase small [Arcobacter nitrofigilis DSM 7299]
          Length = 236

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 14/188 (7%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L    D +    +T  L       +  +I K     +LD+G+G+G + L + +++P    
Sbjct: 3   LYQPQDGYCYNSDTHFL--HHFINTNLKIFKNIKGELLDIGSGSGILGLLVARDNPRLNL 60

Query: 125 VGVDISCKALEIAKSNAVTNGVSERF-DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
              ++  K  E+ K N+  N +  +       D   + +  FD+ VSNPP+  + +V   
Sbjct: 61  NQCEVQEKFQELTKINSKNNKIESKIYKGKYQDI--NFDKTFDICVSNPPFYHTNVVKSE 118

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              ++       +    D +     I+    + LN++G         Q  D++ +    K
Sbjct: 119 NENIK-------IARYNDSMPLVDFISKTS-KILNQNGKFFFCYDVKQLNDIMHLLNENK 170

Query: 244 LFLVNAFK 251
           L  + + +
Sbjct: 171 L-NIESIQ 177


>gi|325681112|ref|ZP_08160642.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8]
 gi|324107034|gb|EGC01320.1| putative 23S rRNA m5C1962 methyltransferase [Ruminococcus albus 8]
          Length = 409

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 24/141 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L   +     R+LD  T TG+  L             VD+S  A++ AK+NA  NG+S++
Sbjct: 227 LAAAKIAKGKRVLDCFTHTGSFALNAAMGGAE-HVTAVDVSQFAVDTAKANAERNGLSDK 285

Query: 150 FDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            D + +D F  +  L      +D ++ +PP            E                 
Sbjct: 286 MDFVCADVFDLLPKLAEEKAGYDFVILDPPAFTKSRKTVNSAE----------------- 328

Query: 204 SHYRTIADGVSRHLNKDGLCS 224
             Y+ I     + L + G  +
Sbjct: 329 RGYKEINYRAMKLLPRGGYLA 349


>gi|251778714|ref|ZP_04821634.1| ribosomal protein L11 methyltransferase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243083029|gb|EES48919.1| ribosomal protein L11 methyltransferase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 313

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 36/198 (18%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+ E LV                    +  +EK   
Sbjct: 117 WKKYYKPSNITDRIVVKPMWEEYSPKNEELVIELDPGMAFGTGTHETTRMCVKALEKYVE 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G G+G + +A   +      +GVD+   A+E AK N   N + +  + L+ +
Sbjct: 177 HDSTVFDVGCGSGILAIA-AAKLGAKLALGVDLDPVAVESAKENVGLNDL-DNIEILEGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG---- 212
               ++G  D++V+N   I + I+  L  +V       +L+ G  GL     I       
Sbjct: 235 LLDVIDGKADIVVAN---IIAEIICILTDDVSK-----ALNKG--GLFITSGIIHERVEM 284

Query: 213 VSRHLNKDGLCSVEIGYN 230
           V+  L++ G   +E+  +
Sbjct: 285 VTSKLDECGFEVMEVNKD 302


>gi|255549690|ref|XP_002515896.1| RNA m5u methyltransferase, putative [Ricinus communis]
 gi|223544801|gb|EEF46316.1| RNA m5u methyltransferase, putative [Ricinus communis]
          Length = 577

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      +       +LDL  GTG + L L   + 
Sbjct: 386 RGLTFQISANSFFQTNTRQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTLAGRAK 445

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A+ NA  NG++     +Q D       F +     D+++S+P
Sbjct: 446 --HVYGYEVVPQAISDARRNAELNGIT-NATFVQGDLNKISDSFGNNFPKPDIVISDP 500


>gi|118591312|ref|ZP_01548710.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Stappia aggregata IAM 12614]
 gi|118435984|gb|EAV42627.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Stappia aggregata IAM 12614]
          Length = 406

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +R F +  L  S   +    +T     +A L   + +++ +  + +L++G G G++ + +
Sbjct: 133 YRLFMDEGLNYSCAYYTSPDDTLEQAQAAKLTHLVAKLDLKPGMEVLEIGGGWGSLAIRM 192

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            +     K   +++S + ++IA+      G+ ++   +  D +   EG FD I+S
Sbjct: 193 AQA--GAKVTSLNVSPEQVKIAEERVRAAGLQDQVTFVLKD-YREFEGQFDRIIS 244


>gi|81428878|ref|YP_395878.1| putative methyltransferase [Lactobacillus sakei subsp. sakei 23K]
 gi|78610520|emb|CAI55571.1| Putative methyltransferase [Lactobacillus sakei subsp. sakei 23K]
          Length = 247

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 77/202 (38%), Gaps = 21/202 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++  S   F    +  LL D A        +      I+DL  G GAV L +  ++  
Sbjct: 15  DIQIIQSPSVFSYSMDAVLLADFA--------QLPKRGLIVDLCAGNGAVGLFMSPKT-N 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
            + VGV++  +  ++A+ +   N ++E+   L  D         +   D++  NPPY + 
Sbjct: 66  GQIVGVELQPRLADMAQRSIELNALTEQLSVLNMDLKDVTTVIKKDSVDIVTCNPPYFKV 125

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                     ++ +  ++L          RT+   +S  L  +G   +     + +++  
Sbjct: 126 A-----PNSQKNPNEHLALARHEIATD-LRTVVQTMSGLLKMNGKGYLVHRPERFLEICD 179

Query: 238 IFESRKLFLVNAFKDY--GGND 257
              + ++        Y   G +
Sbjct: 180 ELRAARMEPKRVRFVYPKAGKE 201


>gi|332522945|ref|ZP_08399197.1| ribosomal protein L11 methyltransferase [Streptococcus porcinus
           str. Jelinkova 176]
 gi|332314209|gb|EGJ27194.1| ribosomal protein L11 methyltransferase [Streptococcus porcinus
           str. Jelinkova 176]
          Length = 317

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 48/153 (31%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        K    D+   A+ +A+ N   N  +        
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKKIFAFDLDDIAVRVAEENIALNQETSNIQVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE    VIV+N                      ++             + +   R
Sbjct: 229 DLLKGVEQKPQVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            L+ +G   +   I       V +  E    FL
Sbjct: 260 LLDDEGYLIMSGIISEKW-DMVRKSAEDAGFFL 291


>gi|330812398|ref|YP_004356860.1| hypothetical protein PSEBR_a5353 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380506|gb|AEA71856.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 398

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGFAEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKASEERFDVIVADPPAFIKRKKDL-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|322375728|ref|ZP_08050240.1| ribosomal protein L11 methyltransferase [Streptococcus sp. C300]
 gi|321279436|gb|EFX56477.1| ribosomal protein L11 methyltransferase [Streptococcus sp. C300]
          Length = 316

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 169 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNPGMENIHVATG 227

Query: 156 DWFSSVEGLFDVIVSN 171
           D    VE   DVIV+N
Sbjct: 228 DLLKGVEIEADVIVAN 243


>gi|89075352|ref|ZP_01161774.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34]
 gi|89048901|gb|EAR54470.1| ribosomal protein L11 methyltransferase [Photobacterium sp. SKA34]
          Length = 294

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +L+D  LAF           L  ++ +D+    ++D G 
Sbjct: 109 FGRRLWICPSWREAPEPDAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     K +G+DI  +A+  ++ NA  NGVS+  +              D
Sbjct: 169 GSGILAIAALKLGAE-KVIGIDIDPQAILASRDNAERNGVSDNLELYLPQ-DQPQGIQAD 226

Query: 167 VIVSN 171
           ++V+N
Sbjct: 227 IVVAN 231


>gi|148543913|ref|YP_001271283.1| O-methyltransferase-like protein [Lactobacillus reuteri DSM 20016]
 gi|184153309|ref|YP_001841650.1| hypothetical protein LAR_0654 [Lactobacillus reuteri JCM 1112]
 gi|227364823|ref|ZP_03848871.1| methyltransferase [Lactobacillus reuteri MM2-3]
 gi|148530947|gb|ABQ82946.1| O-methyltransferase-like protein [Lactobacillus reuteri DSM 20016]
 gi|183224653|dbj|BAG25170.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
 gi|227070167|gb|EEI08542.1| methyltransferase [Lactobacillus reuteri MM2-3]
          Length = 251

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  +   F         +D+ L  +  R   R  ++I+DL  G GA+ + L  +   
Sbjct: 20  DVRIIQNPHYFAFS------LDAVLLANFVRPNHRQKLKIVDLCAGNGAIGIFLHDKLGG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                V++  +  ++A+   + N + +R+  +  D  +  +       D+++ NPPY  
Sbjct: 74  -TFTEVELQPQIADMAERTIMLNDLQDRYTVINDDIANVNDYISKDSIDIVLCNPPYFP 131


>gi|120402772|ref|YP_952601.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1]
 gi|119955590|gb|ABM12595.1| methyltransferase small [Mycobacterium vanbaalenii PYR-1]
          Length = 505

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 15/152 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R +  L +  A       + +  V R LDLGTG G   L L       + V  D + +AL
Sbjct: 138 RHDHVLGIGGASVSLAHAVVRSPVGRALDLGTGCGIQALHLDAHCD--EVVATDTNPRAL 195

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A + A  NG+S  +D      F  V G  FD+IVSNPP++  V    L    R     
Sbjct: 196 ALAAATARLNGMS--WDLRCGSLFEPVAGERFDLIVSNPPFV--VGTGSLDYIYR----- 246

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              D G+ G +  +++ + V+ HL   G   +
Sbjct: 247 ---DSGMVGDALCQSMIEQVADHLEPGGTAQI 275


>gi|289578528|ref|YP_003477155.1| hypothetical protein Thit_1332 [Thermoanaerobacter italicus Ab9]
 gi|289528241|gb|ADD02593.1| protein of unknown function Met10 [Thermoanaerobacter italicus Ab9]
          Length = 391

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD  + TG+  +  L      +   VDIS +A+E+AK N   NG   R + +  + F
Sbjct: 218 AEVLDCFSHTGSFTVHALHYGAK-RVETVDISEEAIEMAKKNVELNGYQGRCNFVCDNAF 276

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD I+ +PP             V+D     +L G       Y+ I   
Sbjct: 277 DILRRYDKEGRKFDTIILDPPAFTKSK-----ETVKD-----ALRG-------YKEINLR 319

Query: 213 VSRHLNKDGLCS 224
             + L + G   
Sbjct: 320 ALKILREGGFLI 331


>gi|187934521|ref|YP_001885096.1| ribosomal protein L11 methyltransferase [Clostridium botulinum B
           str. Eklund 17B]
 gi|226710064|sp|B2TM01|PRMA_CLOBB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|187722674|gb|ACD23895.1| ribosomal protein L11 methyltransferase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 313

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 36/198 (18%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+ E LV                    +  +EK   
Sbjct: 117 WKKYYKPSNITDRIVVKPMWEEYSPKNEELVIELDPGMAFGTGTHETTRMCVKALEKYVE 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G G+G + +A   +      +GVD+   A+E AK N   N + +  + L+ +
Sbjct: 177 HDSTVFDVGCGSGILAIA-AAKLGAKLALGVDLDPVAVESAKENVGLNDL-DNIEILEGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG---- 212
               ++G  D++V+N   I + I+  L  +V       +L+ G  GL     I       
Sbjct: 235 LLDVIDGKADIVVAN---IIAEIICILTDDVSK-----ALNKG--GLFITSGIIHERVDM 284

Query: 213 VSRHLNKDGLCSVEIGYN 230
           V+  L++ G   +E+  +
Sbjct: 285 VTSKLDECGFEVMEVNKD 302


>gi|158320270|ref|YP_001512777.1| ribosomal protein L11 methyltransferase [Alkaliphilus oremlandii
           OhILAs]
 gi|166989893|sp|A8MG53|PRMA_ALKOO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|158140469|gb|ABW18781.1| ribosomal protein L11 methyltransferase [Alkaliphilus oremlandii
           OhILAs]
          Length = 313

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 11/129 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             + D+GTG+G + +   K     K +GVD    A+ +A  N   N V    +  Q +  
Sbjct: 176 TTVFDIGTGSGILAIVGAKLGAK-KAIGVDFDPVAVTVANENVRANKVENIVEIKQGNLM 234

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD--GGIDGLSHYRTIADGVSRH 216
             V    DV+V+N   I + ++  L  +++ F  +  +    GI        I D V   
Sbjct: 235 DVVSEKADVVVAN---IIAEVIVILSEDIKSFLNKNGIFISSGI----ILDKI-DTVKES 286

Query: 217 LNKDGLCSV 225
           L K+GL  +
Sbjct: 287 LVKNGLEVI 295


>gi|237799768|ref|ZP_04588229.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331022623|gb|EGI02680.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 332

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 48/141 (34%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  I+K     +LD G G G +  A+ +  P  + + +D+   A    +    
Sbjct: 177 DRGSALLLENIDKLPSGNLLDFGCGAGVLGAAVKRRYPHNEVIMLDVDAFATASVRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+  +   L  D   +     + I+SNPP+   V  D +  E                
Sbjct: 237 ANGLEAQV--LTGDGIDAAPMDLNTILSNPPFHVGVHTDYMATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HL   G  
Sbjct: 279 -----NLLRKARQHLKSGGEL 294


>gi|167753895|ref|ZP_02426022.1| hypothetical protein ALIPUT_02180 [Alistipes putredinis DSM 17216]
 gi|167658520|gb|EDS02650.1| hypothetical protein ALIPUT_02180 [Alistipes putredinis DSM 17216]
          Length = 352

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  LV SAL             R LD+G GTG + + +  +        VDI   A    
Sbjct: 201 TTCLVASALCDL-----SLTGKRGLDMGCGTGVLAI-VAAKRGAATVDAVDIDEWAEANC 254

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + NA  NG++ER   +  D        +D I +N   I   I+        +     +LD
Sbjct: 255 RENAAANGLAERIAPMLGDVSRIAGRKYDFIAAN---INRNILTMDMPAYAE-----ALD 306

Query: 198 GGIDGL 203
            G D L
Sbjct: 307 TGGDLL 312


>gi|15616471|ref|NP_244777.1| biotin synthesis BioC proein [Bacillus halodurans C-125]
 gi|10176534|dbj|BAB07628.1| biotin synthesis BioC proein [Bacillus halodurans C-125]
          Length = 271

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 48/145 (33%), Gaps = 34/145 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R  K +   ILD+G GTG +    LK  P      VD+S + LE+A+ N  ++ 
Sbjct: 36  LLDEKRRDAKDEPRAILDIGCGTGWLTRECLKSFPQATIDAVDLSKQMLEVAEKNVSSHP 95

Query: 146 VSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                  +Q D    V        +DVIV+N               V  +          
Sbjct: 96  ---NVQFIQGDIEKMVREKPSAKTYDVIVANA--------------VFQW---------- 128

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
             L         +   L  +GL   
Sbjct: 129 --LDKPTETVAQLRSWLKPNGLLLF 151


>gi|83942269|ref|ZP_00954730.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36]
 gi|83846362|gb|EAP84238.1| hypothetical protein EE36_14552 [Sulfitobacter sp. EE-36]
          Length = 408

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 24/135 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+    G   LA L        V VD S  ALE+A+  A   GV++RF T Q D
Sbjct: 234 KGKRVLDVFAHVGGFSLAALAHGA-SSAVAVDGSAPALELAQQGAEAMGVTDRFATRQGD 292

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +  L      FDV++ +PP                     +L+    GL  Y  +A
Sbjct: 293 AFDILTALRAEGEEFDVVICDPPAFAPGKP--------------ALEA---GLRAYERVA 335

Query: 211 DGVSRHLNKDGLCSV 225
              ++ + ++G+  +
Sbjct: 336 RLAAQLVAENGVLGL 350


>gi|312144062|ref|YP_003995508.1| (Uracil-5)-methyltransferase [Halanaerobium sp. 'sapolanicus']
 gi|311904713|gb|ADQ15154.1| (Uracil-5)-methyltransferase [Halanaerobium sp. 'sapolanicus']
          Length = 389

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 56  GWRDFYNV----RLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           G + FY+     +  + S +F    +T  L  +     +   I+  D   I DL  G+G 
Sbjct: 202 GRKYFYDKLLDKKFKIDSLSFF---QTNTLGAEVLYKEAKKYIKNPDAKTIYDLYCGSGT 258

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDV 167
           +  ++   +   K  G+DI  +A+  A+ NA  N VS  +     D    +E      D+
Sbjct: 259 ISQSIADNAK--KIYGIDIDEEAINRARENADLNNVSNTYYI-AGDVLEKIEVLAEKPDL 315

Query: 168 IVSNPP 173
           I+ +PP
Sbjct: 316 IIIDPP 321


>gi|253752747|ref|YP_003025888.1| ribosomal protein L11 methyltransferase [Streptococcus suis SC84]
 gi|253754572|ref|YP_003027713.1| ribosomal protein L11 methyltransferase [Streptococcus suis P1/7]
 gi|253756505|ref|YP_003029645.1| ribosomal protein L11 methyltransferase [Streptococcus suis BM407]
 gi|251817036|emb|CAZ52688.1| ribosomal protein L11 methyltransferase [Streptococcus suis SC84]
 gi|251818969|emb|CAZ56816.1| ribosomal protein L11 methyltransferase [Streptococcus suis BM407]
 gi|251820818|emb|CAR47584.1| ribosomal protein L11 methyltransferase [Streptococcus suis P1/7]
 gi|319759165|gb|ADV71107.1| ribosomal protein L11 methyltransferase [Streptococcus suis JS14]
          Length = 317

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDEVAVRVAQENIDLNANTSNIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    ++   +VIV+N                      ++             + +   R
Sbjct: 229 DLLRGIDIKAEVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIADKWDMVRASAEAAGFFL 291


>gi|218682093|ref|ZP_03529694.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 894]
          Length = 191

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 41/173 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A ++A  N   NG
Sbjct: 39  LEVIDAVVRSRPVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATKVAAENVRRNG 97

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N                              
Sbjct: 98  IASGIVTRTAPGFHSTAFSEHGPFDLIIAN------------------------------ 127

Query: 202 GLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                R +     +   HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 128 --ILARPLIKMAPKLAMHLAPGGSVILSGILAAQRWKVIAAYSGARLRHVRTI 178


>gi|57238300|ref|YP_178619.1| hypothetical protein CJE0603 [Campylobacter jejuni RM1221]
 gi|218562150|ref|YP_002343929.1| putative methyltransferase domain protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|57167104|gb|AAW35883.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|112359856|emb|CAL34643.1| putative methyltransferase domain protein [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|315057914|gb|ADT72243.1| O-methyltransferase, putative [Campylobacter jejuni subsp. jejuni
           S3]
 gi|315928173|gb|EFV07490.1| methyltransferase domain protein [Campylobacter jejuni subsp.
           jejuni DFVF1099]
          Length = 233

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +E+ + N  +N +         + F  +   FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIELIEKNLKSNKIQGDIFHDDFNQF-QIIKKFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P  S     + +             L  +G    
Sbjct: 117 EDQHKAISKFQEFLPLHSFLAKTNSM-------------LKPNGTLYF 151


>gi|15899066|ref|NP_343671.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus
           solfataricus P2]
 gi|284175267|ref|ZP_06389236.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus
           solfataricus 98/2]
 gi|48428143|sp|Q97WC7|CBIT_SULSO RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|13815603|gb|AAK42461.1| Cobalamin biosynthesis precorrin-8W decarboxylase, putative (cbiT)
           [Sulfolobus solfataricus P2]
 gi|261600813|gb|ACX90416.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus solfataricus 98/2]
          Length = 199

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 33/147 (22%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   A +L ++  +   ++LD+G GTG++ + A L      +  G+D   KA+ + + NA
Sbjct: 26  EEIRALALSKLRIKKGDKVLDIGCGTGSITVEASLLVGNSGRVYGIDKEEKAINLTRRNA 85

Query: 142 VTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              GV      ++ +     S++   FD I                             G
Sbjct: 86  EKFGVLNNIVLIKGEAPAILSTINEKFDRI---------------------------FIG 118

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
           G  G    + I       +NK G   +
Sbjct: 119 G--GSEKIKEIISASWEIINKGGRIVI 143


>gi|325682552|ref|ZP_08162069.1| methyltransferase [Lactobacillus reuteri MM4-1A]
 gi|324978391|gb|EGC15341.1| methyltransferase [Lactobacillus reuteri MM4-1A]
          Length = 255

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +VR+  +   F         +D+ L  +  R   R  ++I+DL  G GA+ + L  +   
Sbjct: 24  DVRIIQNPHYFAFS------LDAVLLANFVRPNHRQKLKIVDLCAGNGAIGIFLHDKLGG 77

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
                V++  +  ++A+   + N + +R+  +  D  +  +       D+++ NPPY  
Sbjct: 78  -TFTEVELQPQIADMAERTIMLNDLQDRYTVINDDIANVNDYISKDSIDIVLCNPPYFP 135


>gi|254827759|ref|ZP_05232446.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           N3-165]
 gi|258600139|gb|EEW13464.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           N3-165]
          Length = 314

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 231 NNLLQDINKTDVDIVVAN---ILAEVILLFPEDVYR-----ALKPG--GIFIASGIIEDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 281 AKVVEEALKKAG-LVIEKMEQQGDWV-AIISKRG 312


>gi|21233068|ref|NP_638985.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|188993220|ref|YP_001905230.1| Ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris str. B100]
 gi|21114920|gb|AAM42909.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|167734980|emb|CAP53192.1| Ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. campestris]
          Length = 355

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 57/199 (28%), Gaps = 40/199 (20%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N   +    +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDVYEAEARALNLARRNLQGSAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           D                         +      ++ L   G                +  
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLL-------------LVA 316

Query: 241 SRKLFLVNAFKDYGGNDRV 259
           +R L       D  G  RV
Sbjct: 317 NRHLPYEQVLNDSFGQVRV 335


>gi|15964031|ref|NP_384384.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Sinorhizobium meliloti 1021]
 gi|307301177|ref|ZP_07580939.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti BL225C]
 gi|15073207|emb|CAC41715.1| Putative cyclopropane-fatty-acyl-phospholipid synthase
           [Sinorhizobium meliloti 1021]
 gi|306903633|gb|EFN34220.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti BL225C]
          Length = 413

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 24/179 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSA----LAFSLPRIEKRDVVRILD 103
           H  LG  DFY  +L L  +        R   E L ++A    L     ++  +  +R+LD
Sbjct: 124 HYDLGN-DFY--KLFLDENMLYSCAYFREPDETL-EAAQRNKLRLLAAKLCLKPGMRVLD 179

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G + L L       + +GV +S +   +A   A   G+++R      D +  VEG
Sbjct: 180 IGCGWGDLALYLA-ALEDVEVLGVTLSREQQALASERARAAGMADRVRFELKD-YRDVEG 237

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            FD IVS    +       +      F    +L    DGL+   +I      H++  G+
Sbjct: 238 PFDRIVS----VGMFEHVGVHHYDEFFKKLNALMP-DDGLAVLHSI-----GHMSPPGM 286


>gi|116753331|ref|YP_842449.1| methyltransferase small [Methanosaeta thermophila PT]
 gi|116664782|gb|ABK13809.1| methyltransferase [Methanosaeta thermophila PT]
          Length = 209

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + ++ +++DLG GTG + +            GVDI  +AL IA+ NA   GV    D + 
Sbjct: 43  RGELSQVIDLGCGTGILAIGAALL--GAMAYGVDIDRQALRIARENAEMLGV--HVDFIL 98

Query: 155 SDWFSSVEGLFDVIVSNPPY 174
            D           ++ NPP+
Sbjct: 99  GDIERIAFRRVKTVIMNPPF 118


>gi|47093477|ref|ZP_00231240.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           str. 4b H7858]
 gi|226224072|ref|YP_002758179.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           Clip81459]
 gi|254852096|ref|ZP_05241444.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           R2-503]
 gi|254932656|ref|ZP_05266015.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           HPB2262]
 gi|300765614|ref|ZP_07075593.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           N1-017]
 gi|259534542|sp|C1KVB8|PRMA_LISMC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|47018153|gb|EAL08923.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           str. 4b H7858]
 gi|225876534|emb|CAS05243.1| Putative ribosomal protein L11 methyltransferase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258605396|gb|EEW18004.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           R2-503]
 gi|293584215|gb|EFF96247.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           HPB2262]
 gi|300513715|gb|EFK40783.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           N1-017]
 gi|328465514|gb|EGF36743.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           1816]
 gi|328474982|gb|EGF45776.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           220]
          Length = 314

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 231 NNLLQDINKTDVDIVVAN---ILAEVILLFPEDVYR-----ALKPG--GIFIASGIIEDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 281 AKVVEEALKKAG-LVIEKMEQQGDWV-AIISKRG 312


>gi|332201189|gb|EGJ15260.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           GA47901]
          Length = 306

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 159 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 217

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 218 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 248

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 249 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 280


>gi|292669690|ref|ZP_06603116.1| ribosomal protein L11 methyltransferase [Selenomonas noxia ATCC
           43541]
 gi|292648487|gb|EFF66459.1| ribosomal protein L11 methyltransferase [Selenomonas noxia ATCC
           43541]
          Length = 316

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 46/188 (24%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
             I    +    R+ +     E  P  + +V              +  A  L  +E    
Sbjct: 115 AYI--HTEKIGERIVVRPTWEEYTPSADEIVIELDPGAAFGTGAHATTAMCLRWLEHLVS 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +R+ D+G G+G + +A  K     + + +D    A+ +A+ N   N V       +SD
Sbjct: 173 PGMRVYDVGCGSGILAVAAAKLGAG-EVIAMDYDPVAVSVAEGNIRQNNV-HNVVACESD 230

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S+ EG             +   + +   +                     +   + RH
Sbjct: 231 LLSACEG-------------TAPAELITANIIA--------------DIIIRLFAQLDRH 263

Query: 217 LNKDGLCS 224
           L   G   
Sbjct: 264 LAPGGTLL 271


>gi|297618846|ref|YP_003706951.1| type I restriction-modification system, M subunit [Methanococcus
           voltae A3]
 gi|297377823|gb|ADI35978.1| type I restriction-modification system, M subunit [Methanococcus
           voltae A3]
          Length = 514

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 71/159 (44%), Gaps = 16/159 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  +++L           + K+D+  + D   G+G++ L + KE+   K  G ++  
Sbjct: 205 YTPQQVSKILAKIV------TMGKKDLKSVYDPTCGSGSLLLRISKEADVRKFYGQEVIS 258

Query: 132 KALEIAKSNAVTNGVS-ERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N + + VS ++FD    D   +   +   FD +V+NPPY ++        + 
Sbjct: 259 TTYNLARMNMLLHNVSYDKFDIQNDDVLENPKHLGKKFDAVVANPPYSQTWDNSMHNDDD 318

Query: 188 RDFDP-RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           R  +  +++ +   D  +  + +      HL   G+ +V
Sbjct: 319 RFSEYGKMAPNSKAD-FAFVQHMI----YHLADKGVMAV 352


>gi|157960631|ref|YP_001500665.1| methyltransferase small [Shewanella pealeana ATCC 700345]
 gi|262829156|sp|A8H0P3|TRMN6_SHEPA RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|157845631|gb|ABV86130.1| methyltransferase small [Shewanella pealeana ATCC 700345]
          Length = 264

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 26/150 (17%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    ILD+G G+G + L +  +    K   +++   A    + N   +   +R +
Sbjct: 29  WAPLVQAKTILDIGAGSGLLSL-MAAQRSLAKITAIEVDTDAALDCQQNFNASPWFDRLE 87

Query: 152 TLQSDW----------------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            +  D                  +     F+ I+ NPPY  +                 +
Sbjct: 88  VICCDIQAYAQAHTQVHSQAHNHAEQSKQFEHIICNPPYFANGPQSSNV--------SRA 139

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                D LS   ++   + + L+ +G  S+
Sbjct: 140 TARHTDSLSF-DSLLAAIKQLLSPEGCASL 168


>gi|19310570|gb|AAL85018.1| unknown protein [Arabidopsis thaliana]
          Length = 564

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L L + + 
Sbjct: 373 RGLTFQISANSFFQTNTHQAEVLYKLIEESAGLKGDGSEVVLDLFCGTGTIGLTLARRAK 432

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A  NA  NG+ E    +Q D       F +     D+++S+P
Sbjct: 433 --HVYGYEVVPQAITDAHKNAQINGI-ENATFIQGDLNKIGEDFGNNFPKPDIVISDP 487


>gi|42565079|ref|NP_188767.2| RNA methyltransferase family protein [Arabidopsis thaliana]
 gi|9280234|dbj|BAB01724.1| RNA methyltransferase-like protein [Arabidopsis thaliana]
 gi|332642969|gb|AEE76490.1| RNA methyltransferase family protein [Arabidopsis thaliana]
          Length = 554

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L L + + 
Sbjct: 363 RGLTFQISANSFFQTNTHQAEVLYKLIEESAGLKGDGSEVVLDLFCGTGTIGLTLARRAK 422

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A  NA  NG+ E    +Q D       F +     D+++S+P
Sbjct: 423 --HVYGYEVVPQAITDAHKNAQINGI-ENATFIQGDLNKIGEDFGNNFPKPDIVISDP 477


>gi|317485551|ref|ZP_07944428.1| cyclopropane-fatty-acyl-phospholipid synthase [Bilophila
           wadsworthia 3_1_6]
 gi|316923231|gb|EFV44440.1| cyclopropane-fatty-acyl-phospholipid synthase [Bilophila
           wadsworthia 3_1_6]
          Length = 370

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 30/134 (22%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +++ ++ + +LD+G G G + L + KE    K  GV IS + L  A+     +      +
Sbjct: 149 KLDLKEGMSVLDIGCGWGGLSLYMAKEY-GVKVTGVTISTEQLAYARE----HDAGHLVN 203

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
            L  D + S+EG FD IVS                V  F+          G  +Y     
Sbjct: 204 WLLQD-YRSMEGQFDRIVS----------------VGMFE--------HVGRKNYDIFMK 238

Query: 212 GVSRHLNKDGLCSV 225
              R L   GL  +
Sbjct: 239 TTKRLLKPSGLFLL 252


>gi|163733945|ref|ZP_02141387.1| ribosomal RNA small subunit methyltransferase C, putative
           [Roseobacter litoralis Och 149]
 gi|161393056|gb|EDQ17383.1| ribosomal RNA small subunit methyltransferase C, putative
           [Roseobacter litoralis Och 149]
          Length = 331

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 75/240 (31%), Gaps = 45/240 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG----- 56
           +A +++ + + +   LS+  VI+D      D     L +   R      I +  G     
Sbjct: 79  RAKKEARTLIAQAMSLSAGVVIIDGQK--TDGIDSILRDMRKRIEVSAPISKAHGKLFWC 136

Query: 57  ----------WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
                     WRD     LT       P   +   +D A A     +  +    + DLG 
Sbjct: 137 ATPVASVFADWRD--GPTLTEGGFWTAPGVFSADEIDPASALLADALPAKLGRDVADLGA 194

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLF 165
           G G +   +L          V+    ALE A+ N        R     +D  +   E   
Sbjct: 195 GWGFLSAHILTRPEIEAVHLVEADHMALECARRNVT----DPRAVFHWADVTTWQAERKV 250

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D +V NPP+  S   D             +L     G +  R      +  L   G   +
Sbjct: 251 DTVVMNPPFHTSRAADP------------AL-----GQAFVRA----AAGMLKPQGQLWM 289


>gi|254459389|ref|ZP_05072810.1| methyltransferase small [Campylobacterales bacterium GD 1]
 gi|207084002|gb|EDZ61293.1| methyltransferase small [Campylobacterales bacterium GD 1]
          Length = 231

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 57/155 (36%), Gaps = 9/155 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+LD+G G G V L + +++P  K   V+     +E A  N+  N +  +      
Sbjct: 27  NPKGRVLDVGAGCGIVGLLVARDNPKVKLEAVEKQEAFVEYATINSRVNKIDYKIHKNDF 86

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    +D I+SNPP+        +      F+ R +++         R     VSR
Sbjct: 87  VELDE-NIKYDYIISNPPFY--YDKVSVSKNEMLFNARYNIN------LPLRAFFKKVSR 137

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            LN           +Q   +    +  KL +V+  
Sbjct: 138 VLNPRSHFIFCYDASQFGLICAELDRVKLRVVDVR 172


>gi|167035633|ref|YP_001670864.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida GB-1]
 gi|229564335|sp|B0KHQ8|RLMG_PSEPG RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|166862121|gb|ABZ00529.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida GB-1]
          Length = 374

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 60/200 (30%), Gaps = 37/200 (18%)

Query: 32  DRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS-- 89
            + R        R L              Y  R  L +   E      +     L     
Sbjct: 171 KKARLLTATVAERPLARSP----------YPSRYHLDAPALELVNHANVFCREGLDIGTR 220

Query: 90  --LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             LP + +     R+ DLG G G + +A    +P  +   VD S  A++ A+ N      
Sbjct: 221 AFLPHLPRDLGNARVADLGCGNGVLAIASALGNPDAEYTLVDESYMAVQSAQENWRAALG 280

Query: 147 SERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
               + + +D  + VE    DV++ NPP+ +  +V                     G   
Sbjct: 281 ERAANFVAADGLAGVEKQSLDVVLCNPPFHQQQVV---------------------GDFL 319

Query: 206 YRTIADGVSRHLNKDGLCSV 225
              +       L   G   +
Sbjct: 320 AWRMFQQAREALVVGGALYI 339


>gi|229003040|ref|ZP_04160897.1| hypothetical protein bmyco0002_320 [Bacillus mycoides Rock1-4]
 gi|228758198|gb|EEM07386.1| hypothetical protein bmyco0002_320 [Bacillus mycoides Rock1-4]
          Length = 246

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 22/199 (11%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           E +  +L       +++  S   F    +  LL + A               +LDL TG 
Sbjct: 7   ERLDYLLAE----EMKIIQSPSVFNFSLDAVLLANFAWVPI-------QKGNLLDLCTGN 55

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GL 164
             + L LL         GV+I  +  ++   + + N + ER   +  D     E      
Sbjct: 56  AVIPL-LLSTRTKGNITGVEIQERLYDMGVRSILYNKLEERIQLIHGDLKDMPEQLGRHQ 114

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +DV+  NPPY ++          ++ +  +++      +     +    S+ + + G  +
Sbjct: 115 YDVVTCNPPYFQTPKASE-----KNINEHLAIARHEI-MCTLEDVVYASSQLVKQGGKVA 168

Query: 225 VEIGYNQKVDVVRIFESRK 243
                 + +D+V +    K
Sbjct: 169 FVHRPGRLLDIVTLMRKYK 187


>gi|317055290|ref|YP_004103757.1| methyltransferase small [Ruminococcus albus 7]
 gi|315447559|gb|ADU21123.1| methyltransferase small [Ruminococcus albus 7]
          Length = 409

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L             VD+S  A++ AK+NA  NG+S++ D +  D F  
Sbjct: 238 VLDCFTHTGSFALN-AAFGGAAHVTAVDVSQFAVDTAKANAERNGLSDKMDFVCGDVFDL 296

Query: 161 VEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +  L      +D I+ +PP            E                   Y+ I     
Sbjct: 297 LPKLTEEKAGYDFIILDPPAFTKSRKTVNSAE-----------------RGYKEINYRAM 339

Query: 215 RHLNKDGLCS 224
           + L + G  +
Sbjct: 340 KMLPRGGYLA 349


>gi|104783717|ref|YP_610215.1| nucleotide methyltransferase [Pseudomonas entomophila L48]
 gi|122401752|sp|Q1I4K4|RLMG_PSEE4 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|95112704|emb|CAK17432.1| putative nucleotide methyltransferase [Pseudomonas entomophila L48]
          Length = 374

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 53/171 (30%), Gaps = 27/171 (15%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFS----LPRIEKR-DVVRILDLGTGTGAVCLAL 115
           Y  R  L S   E      +     L       LP + +     R+ DLG G G + +A 
Sbjct: 190 YPSRYRLDSPALELVNHANVFCREGLDIGTRAFLPHLPRNLGQARVADLGCGNGVLAIAS 249

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
              +P      VD S  A++ A+ N          +   +D  +  E    +V++ NPP+
Sbjct: 250 ALANPDAHYTLVDESYMAVQSARDNWQAALGERAVEIHAADGLAGQEKQSLEVVLCNPPF 309

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +  +V                     G      +       L   G   +
Sbjct: 310 HQQQVV---------------------GDFLAWRMFQQAREALVVGGALYI 339


>gi|326402390|ref|YP_004282471.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum
           AIU301]
 gi|325049251|dbj|BAJ79589.1| ribosomal protein L11 methyltransferase [Acidiphilium multivorum
           AIU301]
          Length = 305

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 37/165 (22%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           ++R   RILDLGTG+G + +   K       +  DI  +A+ +A +NA  NGV+     +
Sbjct: 151 KRRAPGRILDLGTGSGILAITAAKIWGKP-VLATDIDQRAVRVASANAALNGVAPLLRVI 209

Query: 154 QSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            SD +S+        +D++ +N           L        P ++             +
Sbjct: 210 GSDGWSAPMLARRAPYDLVFAN----------ILAR------PLVA-------------M 240

Query: 210 ADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           A  +S HL   G   +   +G  Q   V+       L L     D
Sbjct: 241 AHELSAHLAPGGTAILAGLLG-RQARWVMSAHRRHGLVLKGRIDD 284


>gi|239833219|ref|ZP_04681548.1| methyltransferase small [Ochrobactrum intermedium LMG 3301]
 gi|239825486|gb|EEQ97054.1| methyltransferase small [Ochrobactrum intermedium LMG 3301]
          Length = 355

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISC 131
           EP   +  ++D   A  +P +EK     + DLG G G +    LK +   K     ++  
Sbjct: 187 EPGMFSHGVIDKGSALLVPHMEKIVFGNVADLGAGWGYLAAQCLKFADRIKAIDLYEVDF 246

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +ALE A+ N    G S        D  S  + G++D +V NPP+ E  + D         
Sbjct: 247 EALEAARGNLERLGPSVPISFNWFDVTSEKLTGIYDTVVMNPPFHEGRVTDVSLG----- 301

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                           +      +  L   G   +
Sbjct: 302 ----------------QAFIAAAASRLKTGGRLLM 320


>gi|159026766|emb|CAO89053.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 396

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A  F   R  +R+ +RILD G GTGA    LL  +PF   V +DIS KALEIAK     
Sbjct: 41  AAYNFCCHRKPEREDIRILDAGCGTGAGTEYLLALNPFANIVAIDISEKALEIAKERCNR 100

Query: 144 NGVSER------FDTLQSDWFSSVEGLFDVIVS 170
           +GV+ +      F  L  +  +++ G FD+I  
Sbjct: 101 SGVAPKHRGSLDFHHLPLESATNLPGEFDLINC 133


>gi|83309825|ref|YP_420089.1| ribosomal protein L11 methylase [Magnetospirillum magneticum AMB-1]
 gi|82944666|dbj|BAE49530.1| Ribosomal protein L11 methylase [Magnetospirillum magneticum AMB-1]
          Length = 299

 Score = 61.7 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 51/182 (28%)

Query: 89  SLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L  + K+   R +LDLG+G+G + +A  K       V  DI   A+++   NA  NGV 
Sbjct: 150 ALDALAKKQRRRAVLDLGSGSGILGIAAAKCWATM-VVCTDIDPSAVKVLAGNAANNGVG 208

Query: 148 ERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                + SD + +        +D+I SN           L   +  F P ++        
Sbjct: 209 RFVTAVVSDGYRNPVVGRGKPYDLIFSN----------ILARPLCRFAPDLA-------- 250

Query: 204 SHYRTIADGVSRHLNKDGLCS----VEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
                       HL   GL      +E    Q+  V+   E + L L          +R+
Sbjct: 251 -----------AHLAPGGLAILSGLLE---RQERMVMANHERQGLTL---------KNRI 287

Query: 260 LL 261
           ++
Sbjct: 288 VI 289


>gi|254470255|ref|ZP_05083659.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062]
 gi|211960566|gb|EEA95762.1| ribosomal protein L11 methyltransferase [Pseudovibrio sp. JE062]
          Length = 300

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L      +++    R+LDLGTGTG + +AL K     + +  DI   A+E A  NA 
Sbjct: 141 EGCLLELQRLLKRHKYHRMLDLGTGTGVLGIALAK-LTGSEVLATDIDPIAIEAAIDNAR 199

Query: 143 TNGVSERFDTLQS----DWFSSVEGLFDVIVSN 171
            N V   F         D   +  G FD++V+N
Sbjct: 200 KNNVGPLFKAFTGAGVEDRRFNEFGPFDLVVAN 232


>gi|170078614|ref|YP_001735252.1| hypothetical protein SYNPCC7002_A2010 [Synechococcus sp. PCC 7002]
 gi|164599156|gb|AAC14722.2| CpcM [Synechococcus sp. PCC 7002]
 gi|169886283|gb|ACA99996.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 399

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 6/94 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
            +A  F   R    D +RILD G GTG     L+  +P  + VG+D+S  ALE+A+    
Sbjct: 40  QAAYNFCTGRKPSTDNIRILDAGCGTGVGTEYLIHLNPAAEIVGIDLSEGALEVAEKRCQ 99

Query: 143 TNGVSER------FDTLQSDWFSSVEGLFDVIVS 170
            +GV +R      F  L  +  + +EG FD+I  
Sbjct: 100 QSGVRDRHTAPVTFKRLPIEQATELEGEFDLINC 133


>gi|92114407|ref|YP_574335.1| 50S ribosomal protein L11P methyltransferase [Chromohalobacter
           salexigens DSM 3043]
 gi|122419625|sp|Q1QV72|PRMA_CHRSD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91797497|gb|ABE59636.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Chromohalobacter salexigens DSM 3043]
          Length = 299

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 34/162 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL  +       D  R+LD G G+G + +A   +       G DI  +AL+ ++ NA  
Sbjct: 149 TALCLAWLDGLDLDASRVLDFGCGSGILAIA-ALKLGARHATGTDIDPQALQASRDNAQR 207

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N V++        +  +  +   DV+V+N   +   +V+                     
Sbjct: 208 NDVADEHLSLCYPERLA--DERHDVVVAN--ILAGPLVE--------------------- 242

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRK 243
                 +A  +  HL   G  ++  I   Q  +V+  +  + 
Sbjct: 243 ------LAPTLCAHLAPGGRLALSGILAGQAEEVMDAYREQG 278


>gi|117620314|ref|YP_857842.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|166223392|sp|A0KNJ1|PRMA_AERHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|117561721|gb|ABK38669.1| ribosomal protein L11 methyltransferase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 292

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 106 FGERLWICPSWRDVPNPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVVDFGC 165

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF 165
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGV+++ +  L +D    VE   
Sbjct: 166 GSGILGIA-ALKLGAARVIGIDIDPQAIQASRDNAERNGVADQIELYLPADQPQDVEA-- 222

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 223 DVVVAN 228


>gi|310818989|ref|YP_003951347.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392061|gb|ADO69520.1| Ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 288

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 33/160 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     +       +LD+GTGTG + +A  K+    + VG D    ++E+A  NA  N 
Sbjct: 145 LAAIDTYMASHPGASVLDVGTGTGVLAIA-AKKLGAGRVVGTDNDPTSVELAHENAAVND 203

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             +    L       V G FD++V+N   + + ++    L                    
Sbjct: 204 TPDVE--LSGKGLEQVPGTFDLVVAN--ILANTLIALAPL-------------------- 239

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              IA  V   L   G+ +      QK +V   + ++ L 
Sbjct: 240 ---IAPKVKERLVLAGVLA-----PQKAEVEAAYRAQGLT 271


>gi|146281318|ref|YP_001171471.1| nucleotide methyltransferase, putative [Pseudomonas stutzeri A1501]
 gi|229564337|sp|A4VI28|RLMG_PSEU5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|145569523|gb|ABP78629.1| nucleotide methyltransferase, putative [Pseudomonas stutzeri A1501]
          Length = 375

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 46/138 (33%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K    +R+ DLG G G + +     +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPKALGAIRVADLGCGNGVLGIVYALGNPQAELTLVDESYMAVQSARENWQVILGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             D    D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PADIRAGDGLAEQPPGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L K G   +
Sbjct: 322 RMFTQAKAALTKGGELWI 339


>gi|145487496|ref|XP_001429753.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124396847|emb|CAK62355.1| unnamed protein product [Paramecium tetraurelia]
          Length = 241

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 85/220 (38%), Gaps = 57/220 (25%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-----LALLKESPFFK 123
            + + P  ++ L +D AL   +    +  +  ++++G G+G +      L   + +    
Sbjct: 11  KNVYVPNDDSYLFLD-ALKEEIQYFPQNAI--VVEMGCGSGILIGNVSKLLQEQNNRALM 67

Query: 124 GVGVDISCKAL----EIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIE 176
            VG+DI+  A      I + N         FD + S+ F  +   +   D+ + NPPY+ 
Sbjct: 68  CVGIDINYDACIASSRIMQEN------QIYFDCINSNGFEGLALDKSGIDIFIFNPPYVP 121

Query: 177 SVIVD--------------------------CLGLEVRDFDPRISLD-----GGIDGLSH 205
           +   +                           L  EV     +++L      GG DG+  
Sbjct: 122 TEDEEVERCKKYFKEKQQLFAQAYANNLRGQDLIEEVA----KVNLIDCSYSGGKDGMEV 177

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQK-VDVVRIFESRKL 244
              I + V++ +N +G+  + +  +    +++  F+++  
Sbjct: 178 TWKILEKVTKLMNANGIIYLFVIQDNPINEIIAFFKAKGF 217


>gi|152994432|ref|YP_001339267.1| type 12 methyltransferase [Marinomonas sp. MWYL1]
 gi|150835356|gb|ABR69332.1| Methyltransferase type 12 [Marinomonas sp. MWYL1]
          Length = 347

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 52/154 (33%), Gaps = 29/154 (18%)

Query: 83  DSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D  L   L   I +   +  LDLG G G V L+L +  P   GV  D   + +++A  N 
Sbjct: 161 DRILDRVLNVTIAEETPLHFLDLGGGPGLVALSLARRFPNSTGVLFDF-PETVKVAYKNI 219

Query: 142 VTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +  G+  R +    D    S    FD+I  +               V  F     LD   
Sbjct: 220 MAEGLEHRIEVQAGDLNKQSPNSQFDLIWCS--------------SVLHF-----LD--- 257

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
           D     + I    S  L  +G+  +         
Sbjct: 258 DATEAIKRI----SALLKPNGILLILHAEQTAEK 287


>gi|157952320|ref|YP_001497212.1| hypothetical protein NY2A_B016L [Paramecium bursaria Chlorella
           virus NY2A]
 gi|2454654|gb|AAC03124.1| DNA adenine methyltransferase [Paramecium bursaria Chlorella virus
           NY2A]
 gi|155122547|gb|ABT14415.1| hypothetical protein NY2A_B016L [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 368

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   IL+   GTG +    +   P     GV++     ++ K         E    +  D
Sbjct: 41  DPKNILEPSCGTGEIISDCIDRFPSANITGVELDEDIYDVCKRTYTR----ENVTIINDD 96

Query: 157 WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           + +     FD IV NPP+ +           VR    R +L            +   ++ 
Sbjct: 97  FLAWKGEKFDFIVGNPPFVVRPKGHKNDDRIVRG---RSNLY--------VEFLFKCITE 145

Query: 216 HLNKDGLCSVEI 227
           HL +DG+ +  I
Sbjct: 146 HLKEDGILAFII 157


>gi|297707709|ref|XP_002830633.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1-like
           isoform 2 [Pongo abelii]
          Length = 186

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 65/198 (32%), Gaps = 44/198 (22%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T L      A      E   V   L++G+G+G
Sbjct: 9   PLHGHVGRGAF--------SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            V   L     P    +  DI+ +A       A  N V                      
Sbjct: 58  VVSAFLASMIGPQALYMCTDINPEAAACTLETARCNKV---------------------- 95

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-I 227
                YI+ VI D     V       +  GG +G          V   L+  GL  +  I
Sbjct: 96  -----YIQPVITDL----VGSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTI 146

Query: 228 GYNQKVDVVRIFESRKLF 245
             N   ++++I +++ L 
Sbjct: 147 KENNPEEILKIMKTKGLQ 164


>gi|295108671|emb|CBL22624.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Ruminococcus obeum A2-162]
          Length = 271

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 32/152 (21%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++     +IL++G G+GA+ +      P  + +GVD    A+      
Sbjct: 87  IMEQVHRVVLSHLDYDGEGKILEVGCGSGALTIRAALTWPKAQVIGVD-YWGAVYNYSKA 145

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + + NA + GV+        D       +  FDV++SN  Y+   ++             
Sbjct: 146 LCEKNAASEGVASHCVFQHGDAKQLDFPDESFDVVISN--YVYHNVM------------- 190

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                G D     + +     R L K G+ ++
Sbjct: 191 -----GAD----MQKLLLESLRVLKKGGVFAL 213


>gi|242072011|ref|XP_002451282.1| hypothetical protein SORBIDRAFT_05g026910 [Sorghum bicolor]
 gi|241937125|gb|EES10270.1| hypothetical protein SORBIDRAFT_05g026910 [Sorghum bicolor]
          Length = 761

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 27/168 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + +  +T SS  F+   E+        L   + + +      +LD+G G G + + L+++
Sbjct: 492 YLDPSMTYSSGIFKAEDESLEAAQLRKLDSLINKAKVESGHHVLDIGCGWGTLAIRLVQK 551

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +   K  G+ +S + L+ AK      G+ +R   L  D+     G  FD I+S       
Sbjct: 552 T-GCKCTGITLSEEQLKYAKRKVKEAGLEDRITLLLCDYRQIPNGQKFDRIISC------ 604

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   E+ +        G       Y         HL + G+  +
Sbjct: 605 --------EMLEH------VGHE----FYEDFFASCEYHLAEHGIFVL 634


>gi|261405592|ref|YP_003241833.1| 50S ribosomal protein L11 methyltransferase [Paenibacillus sp.
           Y412MC10]
 gi|261282055|gb|ACX64026.1| ribosomal protein L11 methyltransferase [Paenibacillus sp.
           Y412MC10]
          Length = 325

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 72/219 (32%), Gaps = 41/219 (18%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ ++        + +  + + + P  E E +++     +                  
Sbjct: 114 TAWKQYFKPIRVSDRLTIKPTWEEYTPESEHESIIELDPGMAFGTGTHPTTSLCLRTLEM 173

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +         + + +D+   A+  A  N   NG+ +R    
Sbjct: 174 VIKGGEEVIDVGTGSGILSIG-AAHLGASRILALDLDPVAVSSATENTRLNGLEDRITVK 232

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +SD  S +    D         +  +   + + V +    ++               D V
Sbjct: 233 ESDLLSVLTDSSDD-------SDLGVTLPVQIVVANI---LA--------EVILLFVDDV 274

Query: 214 SRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            + L   G   +  I  N++  V +   +    + +  +
Sbjct: 275 YQALQPGGAYIASGIYKNKEEIVEKALIASGFEIADICR 313


>gi|94265594|ref|ZP_01289338.1| Ribosomal protein L11 methyltransferase [delta proteobacterium
           MLMS-1]
 gi|93453873|gb|EAT04231.1| Ribosomal protein L11 methyltransferase [delta proteobacterium
           MLMS-1]
          Length = 310

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 53/152 (34%), Gaps = 35/152 (23%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++    +LD+G GTG + +A        + V  D   +A+ +A+ N   N ++       
Sbjct: 160 QKPPATVLDVGCGTGILAMAAAL-WGCPRVVATDNDPQAVAVARDNFAANQLTIEATVTP 218

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
               +++   F+V+++N       I+                            +A  ++
Sbjct: 219 P---AALGEQFEVVLAN-------IIH----------------------DVLLEMATELT 246

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
             L   G   +   +   Q++ +   F+   L
Sbjct: 247 AALKPGGHLILAGILSGEQEISIKDHFQELGL 278


>gi|329924056|ref|ZP_08279319.1| ribosomal protein L11 methyltransferase [Paenibacillus sp. HGF5]
 gi|328940895|gb|EGG37203.1| ribosomal protein L11 methyltransferase [Paenibacillus sp. HGF5]
          Length = 325

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 72/219 (32%), Gaps = 41/219 (18%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------ 95
             W+ ++        + +  + + + P  E E +++     +                  
Sbjct: 114 TAWKQYFKPIRVSDRLTIKPTWEEYTPESEHESIIELDPGMAFGTGTHPTTSLCLRTLEM 173

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +    ++D+GTG+G + +         + + +D+   A+  A  N   NG+ +R    
Sbjct: 174 VIKGGEEVIDVGTGSGILSIG-AAHLGASRILALDLDPVAVSSATENTRLNGLEDRITVK 232

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +SD  S +    D         +  +   + + V +    ++               D V
Sbjct: 233 ESDLLSVLTDSSDD-------SDLGVTLPVQIVVANI---LA--------EVILLFVDDV 274

Query: 214 SRHLNKDG-LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
            + L   G   +  I  N++  V +   +    + +  +
Sbjct: 275 YQALQPGGAYIASGIYKNKEEIVEKALIASGFEIADICR 313


>gi|329767132|ref|ZP_08258660.1| 50S ribosomal protein L11 methyltransferase [Gemella haemolysans
           M341]
 gi|328837857|gb|EGF87482.1| 50S ribosomal protein L11 methyltransferase [Gemella haemolysans
           M341]
          Length = 311

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 37/152 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G G+G + +A            VD+   A++++  N   N + +R +  Q+   + 
Sbjct: 179 VIDVGCGSGILSIA-ASYLTDGNIKAVDLDKLAVDVSYENFALNKLEKRIEVEQASLLTK 237

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +++IV+N               +                     + D     L   
Sbjct: 238 ETKKYNIIVAN---------------ILTH--------------IIELMIDDAYNLLEDG 268

Query: 221 GLC----SVEIGYNQKVDVVRIFESRKLFLVN 248
           G       +E    +K +++     R   LV 
Sbjct: 269 GYYITSGIIE---EKKDELLERMLERGFKLVE 297


>gi|88603852|ref|YP_504030.1| methyltransferase small [Methanospirillum hungatei JF-1]
 gi|88189314|gb|ABD42311.1| methyltransferase [Methanospirillum hungatei JF-1]
          Length = 202

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQSDWF 158
           +LDLG GTG + +         + V V+   +A+ IA++NA   G S RF    +  +  
Sbjct: 51  VLDLGCGTGILAIGAALL--GAEVVAVEDDVEAIRIAEANARDLGCSIRFIKTDVAGEEA 108

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLG 184
            ++    D ++ NPP+          
Sbjct: 109 LALIPDCDTVIMNPPFGAQTEHADRP 134


>gi|89093754|ref|ZP_01166700.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92]
 gi|89081884|gb|EAR61110.1| hypothetical protein MED92_04629 [Oceanospirillum sp. MED92]
          Length = 398

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 30/137 (21%)

Query: 97  DVVRILDLGT---GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  R+LDL +   G GA  LA        + + VD S  ALE+A  NA  N   +RF+  
Sbjct: 220 EGKRVLDLFSYVGGWGAQALAAGA----SQAICVDASHFALEVAAENARINNAEDRFEGF 275

Query: 154 QSDWFS------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             D F       + +  FDV+V +PP       D     VR+            G   Y 
Sbjct: 276 HGDAFDICKSLIADKEKFDVVVLDPPAFIQKKKD-----VRN------------GERAYS 318

Query: 208 TIADGVSRHLNKDGLCS 224
            + +   R L KDG+  
Sbjct: 319 RMNNFAMRLLKKDGILV 335


>gi|330807573|ref|YP_004352035.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327375681|gb|AEA67031.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 332

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++K     +LD G G G +  A+ +  P      +D+   A   ++    
Sbjct: 177 DRGSALLLEHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNTVTLLDVDAFAAASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + L  D   +       I+SNPP+   V  D    E                
Sbjct: 237 ANGLEA--EVLTGDGIDAAPMGLSAILSNPPFHVGVHTDYHATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    ++HL   G  
Sbjct: 279 -----NLLRKAAKHLKNGGEL 294


>gi|257465861|ref|ZP_05630172.1| ribosomal RNA small subunit methyltransferase C [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917018|ref|ZP_07913258.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313690893|gb|EFS27728.1| 16S rRNA m(2)G 1207 methyltransferase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 221

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 21/168 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +      + F    +  LL +    F+ P+ +       L++GTG G + + L ++   
Sbjct: 12  GLGFYQEKEGFRFGNDIVLLAEFITEFAKPQQKN------LEIGTGNGILPVLLSQKGFL 65

Query: 122 FKGV-GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
            K    VDI    + +A+ NA  NG+  +F       FS  +  +  I +NPPY++    
Sbjct: 66  SKEYFAVDILESNIVLAQKNAEKNGIYAQFLCQDIRSFSE-KNSYRQIFANPPYMKQDGK 124

Query: 181 ---DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              D     +   +  +SL                V + L   G   +
Sbjct: 125 LQNDNKKKAIARHEICLSL----------EEFILSVKKILAPIGALYM 162


>gi|197335027|ref|YP_002156936.1| ribosomal RNA small subunit methyltransferase C [Vibrio fischeri
           MJ11]
 gi|226713151|sp|B5FAM0|RSMC_VIBFM RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|197316517|gb|ACH65964.1| ribosomal RNA small subunit methyltransferase C [Vibrio fischeri
           MJ11]
          Length = 339

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 35/171 (20%)

Query: 59  DFYNVRLTLS--SDTFEPRPETE--LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +F N  + +      F      +   L    L  +LP +       +LD G G G +   
Sbjct: 165 EFENHTIEVRSLPGVFSHGEFDKGSEL----LLQTLPALRG----HVLDFGCGAGVIGSV 216

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +   +P      VDIS  A+  +      N +        SD +S  +  +  IVSNPP+
Sbjct: 217 MKTINPKIHLDMVDISALAIASSIETLKANNLEGCVFA--SDVYSDTKENYQFIVSNPPF 274

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              +       E                      + +   ++L  +G   +
Sbjct: 275 HAGLKTHYSSTE---------------------ELLEKAPQNLTHEGQLIL 304


>gi|58865360|ref|NP_001011895.1| tRNA (uracil-5-)-methyltransferase homolog A [Rattus norvegicus]
 gi|53733829|gb|AAH83619.1| TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) [Rattus
           norvegicus]
 gi|149019780|gb|EDL77928.1| rCG36750, isoform CRA_a [Rattus norvegicus]
          Length = 615

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 47  KHESIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G      D   +   +S   F    +        L   +    +      +
Sbjct: 371 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 427

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    K +G+++  +A+E A+ NA+TN +S   +         V
Sbjct: 428 LDVCCGTGTIGLALAPKVK--KVIGIELCQEAVEDARMNALTNELS-NVEFHCGRAEDLV 484

Query: 162 EGLFDVIVS 170
            GL   + S
Sbjct: 485 PGLVSKLSS 493


>gi|315178394|gb|ADT85308.1| ribosomal protein L11 methyltransferase [Vibrio furnissii NCTC
           11218]
          Length = 295

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 54/254 (21%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+ +    V        ++  D      Q                +         + 
Sbjct: 59  ALYDAEADTSWVLSQIRASHLLADDFAYKVEQIEDKDWEREWMDNFHPMQ--------FG 110

Query: 63  VRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGTGT 108
            RL +       P P+   +++D  LAF           L  ++  D     ++D G G+
Sbjct: 111 KRLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLEWLDSLDLSGKTVIDFGCGS 170

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + +A   +    K +G+DI  +AL  +K NA  NGV +  +                 
Sbjct: 171 GILAIA-AIKLGAAKVIGIDIDPQALLASKDNASRNGVEDLIEV---------------- 213

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EI 227
                Y+     + L  +V   +       G       R ++  +   +  +GL ++  +
Sbjct: 214 -----YLPKDQPEGLVADVVVANIL----AGP-----LRELSPVIKSLMKPNGLLAMSGV 259

Query: 228 GYNQKVDVVRIFES 241
              Q  DV   +  
Sbjct: 260 LNTQAEDVANYYRD 273


>gi|262165397|ref|ZP_06033134.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM223]
 gi|262025113|gb|EEY43781.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM223]
          Length = 413

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    AK      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCKVTTTTISEEQFAYAKQKIAALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   L+ D +  +EG +D +VS
Sbjct: 244 LSEQITLLKQD-YRLLEGQYDKLVS 267


>gi|148653420|ref|YP_001280513.1| ribosomal protein L11 methyltransferase [Psychrobacter sp. PRwf-1]
 gi|172048533|sp|A5WFX2|PRMA_PSYWF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|148572504|gb|ABQ94563.1| LSU ribosomal protein L11P methyltransferase [Psychrobacter sp.
           PRwf-1]
          Length = 307

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 27/123 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D G G+G + +A L      +   VDI  +A+   K NA  N V+   +    + F+ 
Sbjct: 161 IIDYGCGSGILGIAALLLGAK-QVYSVDIDPQAVLATKQNAERNDVTHALEVYLPEDFAK 219

Query: 161 VEG-----LFDVIVSN---------PPYIESVIV------------DCLGLEVRDFDPRI 194
                     D+I +N          PY+ ++I             + L   VR ++P  
Sbjct: 220 AFAAGDIPKADIITANILAKPLMELAPYLATLIKPKGGIVLAGLISEQLEDMVRAYEPWF 279

Query: 195 SLD 197
           +LD
Sbjct: 280 NLD 282


>gi|146162055|ref|XP_001008605.2| hypothetical protein TTHERM_00812770 [Tetrahymena thermophila]
 gi|146146553|gb|EAR88360.2| hypothetical protein TTHERM_00812770 [Tetrahymena thermophila
           SB210]
          Length = 311

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 9/143 (6%)

Query: 10  FLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSS 69
            L +  G      I   D ++  +    + +A         I ++ G + +         
Sbjct: 160 LLSQHLGKQQEGAIEKHDFIIPFQHWQGIHSAEQYESNGIPIPQLNGKKVY------PVY 213

Query: 70  DTFEPRPETEL-LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             + P  +  L L+   L  +   +  R V ++ DLG G+G +   + + +P  K   +D
Sbjct: 214 GVWPPTQQHYLKLLAQYLQDNKNYL--RGVEKVCDLGCGSGILSFIIAEAAPEVKITSLD 271

Query: 129 ISCKALEIAKSNAVTNGVSERFD 151
               A+     N+    +S R  
Sbjct: 272 KYEAAVRCTGMNSAILSLSSRIR 294


>gi|83955504|ref|ZP_00964135.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1]
 gi|83840148|gb|EAP79323.1| hypothetical protein NAS141_19674 [Sulfitobacter sp. NAS-14.1]
          Length = 391

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 24/135 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+    G   LA    +     V VD S  ALE+A+  A   GVS+RF T Q D
Sbjct: 217 KGKRVLDVFAHVGGFSLA-ALANGASSAVAVDGSAPALELAQQGAEAMGVSDRFATRQGD 275

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +  L      FDV++ +PP                     +L+    GL  Y  +A
Sbjct: 276 AFDILTALRAEGEEFDVVICDPPAFAPGKP--------------ALEA---GLRAYERVA 318

Query: 211 DGVSRHLNKDGLCSV 225
              ++ + ++G+  +
Sbjct: 319 RLAAQLVAENGVLGL 333


>gi|284048009|ref|YP_003398348.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731]
 gi|283952230|gb|ADB47033.1| Methyltransferase type 11 [Acidaminococcus fermentans DSM 20731]
          Length = 244

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+    + P + ++   ++L+LG GTGAV L L       K +GVD++   +E+ + +  
Sbjct: 29  DAVFLAAFPHLVRK--AKVLELGCGTGAVSLLLANRGAE-KVLGVDVNPHVVELFQRSIR 85

Query: 143 TNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
            N + +R +    D     +GL     D++ +NPPY
Sbjct: 86  DNHLEDRVEGRVCDLRDFRDGLPCDALDLVAANPPY 121


>gi|258621712|ref|ZP_05716743.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM573]
 gi|258585943|gb|EEW10661.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           VM573]
          Length = 413

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     +     IS +    AK      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCRVTTTTISEEQFAYAKQKIAALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   L+ D +  +EG +D +VS
Sbjct: 244 LSEQITLLKQD-YRLLEGQYDKLVS 267


>gi|325123362|gb|ADY82885.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 337

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 57/188 (30%), Gaps = 38/188 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    RI D G G G +   L K +       +DI   AL   +    
Sbjct: 180 DVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFS 239

Query: 143 TNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG+ S++         +      D IVSNPP+ + +  +    E               
Sbjct: 240 RNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255
           GL           +HL   G   +         V        I   +         D+ G
Sbjct: 285 GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCQIKTDHQG 329

Query: 256 NDRVLLFC 263
              VL  C
Sbjct: 330 FK-VLYAC 336


>gi|293611040|ref|ZP_06693339.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826692|gb|EFF85058.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 337

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 57/188 (30%), Gaps = 38/188 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP + +    RI D G G G +   L K +       +DI   AL   +    
Sbjct: 180 DVGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKINSSNIIHALDIDAFALRSTEMTFS 239

Query: 143 TNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG+ S++         +      D IVSNPP+ + +  +    E               
Sbjct: 240 RNGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASE--------------- 284

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR------IFESRKLFLVNAFKDYGG 255
           GL           +HL   G   +         V        I   +         D+ G
Sbjct: 285 GL------CQNAKKHLKASGELWI---------VANRFLNYPILIEKHFGQCQIKTDHQG 329

Query: 256 NDRVLLFC 263
              VL  C
Sbjct: 330 FK-VLYAC 336


>gi|326314914|ref|YP_004232586.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
           subunit [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323371750|gb|ADX44019.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
           subunit [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 444

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 30/165 (18%)

Query: 63  VRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           VR  L    +  R   + L+      A SL R++ R   R+ D+G G+G+V L   +  P
Sbjct: 243 VRFGLPDAAYHQRQPDKGLITKQEVRAVSLARMQLRAASRVWDIGAGSGSVGLEAARLCP 302

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 ++ +   +EIA+ NA   GVS     +       ++   D              
Sbjct: 303 QGHVWAMEKNEGDVEIARRNARDFGVSNH-TLVHGKAPEGLDAWPD-------------- 347

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      P     GG  G      IA  + R L   G   +
Sbjct: 348 -----------PDAVFIGGSGG-ELAELIALCLKR-LRPGGWLVM 379


>gi|320156722|ref|YP_004189101.1| S-adenosyl-L-methionine dependent methyltransferase-like protein
           [Vibrio vulnificus MO6-24/O]
 gi|319932034|gb|ADV86898.1| S-adenosyl-L-methionine dependent
           methyltransferase,cyclopropane-fatty-acyl-phospholipid
           synthase-like protein [Vibrio vulnificus MO6-24/O]
          Length = 418

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +R F + R+  SS  +  R ++E L + A    +     +++ +    ++++
Sbjct: 152 HYDLGNDLYRVFLDERMLYSSALY--RSDSESL-EQAQINKMDRLCQQLQLKPSDEVIEI 208

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ + +  E+   +     IS +  + AK      G++ER   L+ D +  + G 
Sbjct: 209 GTGWGAMAIYMA-ETYGCRVTTTTISDEQYDYAKQQIAERGLTERIQLLKKD-YRDLTGQ 266

Query: 165 FDVIVS 170
           FD +VS
Sbjct: 267 FDKLVS 272


>gi|302037529|ref|YP_003797851.1| hypothetical protein NIDE2210 [Candidatus Nitrospira defluvii]
 gi|300605593|emb|CBK41926.1| protein of unknown function, putative Methyltransferase [Candidatus
           Nitrospira defluvii]
          Length = 408

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIV--RSLKHESIHRILGWRDFYNVR 64
           +   L  V   S          V   ++   L   I   R         I     FY++ 
Sbjct: 18  ARWGLRHV--ESDAAYFAWQREVFTPQELDTLHRHIEAKRQATDGPAAEI----AFYDLT 71

Query: 65  --LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
                    +  R E  L V + +A  L      D   ILD+G G G +     K  P  
Sbjct: 72  AQPRSVPALYSQRYEYYLEVGARVAGHL-----GDASTILDVGCGIGILTTFYAKRCPAS 126

Query: 123 KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVS 170
             VG+D S  ++++A+  A   G+ + RF+    D    + G FD+I++
Sbjct: 127 TIVGIDRSPASVDLARQLAQELGLTNVRFECRDLDQ-QDLAGCFDLIIA 174


>gi|49483826|ref|YP_041050.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257425703|ref|ZP_05602127.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257428364|ref|ZP_05604762.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257431001|ref|ZP_05607381.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257433689|ref|ZP_05610047.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257436603|ref|ZP_05612647.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M876]
 gi|282904160|ref|ZP_06312048.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C160]
 gi|282905987|ref|ZP_06313842.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282908897|ref|ZP_06316715.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282911216|ref|ZP_06319018.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914385|ref|ZP_06322171.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282919354|ref|ZP_06327089.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282924679|ref|ZP_06332347.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C101]
 gi|283958342|ref|ZP_06375793.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|293503459|ref|ZP_06667306.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293510476|ref|ZP_06669182.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M809]
 gi|293531016|ref|ZP_06671698.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295428156|ref|ZP_06820788.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297590878|ref|ZP_06949516.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|60390433|sp|Q6GGC2|PRMA_STAAR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|49241955|emb|CAG40650.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271397|gb|EEV03543.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257275205|gb|EEV06692.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257278431|gb|EEV09067.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257281782|gb|EEV11919.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257283954|gb|EEV14077.1| LSU ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M876]
 gi|282313514|gb|EFB43909.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C101]
 gi|282317164|gb|EFB47538.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282321566|gb|EFB51891.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324911|gb|EFB55221.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282327161|gb|EFB57456.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282331279|gb|EFB60793.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282595778|gb|EFC00742.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus C160]
 gi|283790491|gb|EFC29308.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|290920284|gb|EFD97350.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291095125|gb|EFE25390.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466840|gb|EFF09360.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus M809]
 gi|295128514|gb|EFG58148.1| 50S ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|297575764|gb|EFH94480.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312437953|gb|ADQ77024.1| ribosomal protein L11 methyltransferase [Staphylococcus aureus
           subsp. aureus TCH60]
          Length = 312

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASYLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIDDAYN 261


>gi|37679521|ref|NP_934130.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
           YJ016]
 gi|37198265|dbj|BAC94101.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
           YJ016]
          Length = 418

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 12/126 (9%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +R F + R+  SS  +  R ++E L + A    +     +++ +    ++++
Sbjct: 152 HYDLGNDLYRVFLDERMLYSSALY--RSDSESL-EQAQINKMDRLCQQLQLKPSDEVIEI 208

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ + +  E+   +     IS +  + AK      G++ER   L+ D +  + G 
Sbjct: 209 GTGWGAMAIYMA-ETYGCRVTTTTISDEQYDYAKQQIAERGLTERIQLLKKD-YRDLTGQ 266

Query: 165 FDVIVS 170
           FD +VS
Sbjct: 267 FDKLVS 272


>gi|218295159|ref|ZP_03495995.1| methyltransferase small [Thermus aquaticus Y51MC23]
 gi|218244362|gb|EED10887.1| methyltransferase small [Thermus aquaticus Y51MC23]
          Length = 374

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 13/126 (10%)

Query: 52  HRILGWRD-FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
            RILG    FY++    S+       +  LL+  AL  ++P ++ R   R+LDLG G GA
Sbjct: 191 ARILGQAYTFYHLPGVFSAGRV---DKASLLLLEALVTAVPSLKGR---RVLDLGAGYGA 244

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
           + L L +     +   V+    ++   + +   NG+  R   L SD   ++  E  FD+I
Sbjct: 245 LTLPLARL--GAEVTAVEDDLVSVLSLRRSLEENGLEAR--ALHSDVDEALTPEERFDII 300

Query: 169 VSNPPY 174
           V+NPP+
Sbjct: 301 VTNPPF 306


>gi|163748711|ref|ZP_02155964.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99]
 gi|161331821|gb|EDQ02625.1| ribosomal protein L11 methyltransferase [Shewanella benthica KT99]
          Length = 293

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/216 (20%), Positives = 84/216 (38%), Gaps = 38/216 (17%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLD-----DRQRFFLTNAIVRSLKHESIHRILG 56
           +A RD    + ++  L    +  D    ++     D +R ++ N          I     
Sbjct: 61  EADRDLAILVEQLKSLP--YLGTDFRYKIEQVEDKDWEREWMDNF-------HPIQ---- 107

Query: 57  WRDFYNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RIL 102
               +  RL +       P P+   +++D  LAF           L  ++  ++    ++
Sbjct: 108 ----FGKRLWICPSWREIPDPQAVNVILDPGLAFGTGTHPTTALCLEWLDGLELTDKEVI 163

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D G G+G + +A LK     K  G+DI  +A+E +K+NA  N V +R      +     +
Sbjct: 164 DFGCGSGILAVAALKLGAK-KVTGIDIDYQAIEASKANAERNDVQDRLSLYLPEE-QPQD 221

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              D++V+N        +  L  E      +++L G
Sbjct: 222 LKADILVANILAGPLRELAPLIAEKVKSGGQLALSG 257


>gi|262171843|ref|ZP_06039521.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           MB-451]
 gi|261892919|gb|EEY38905.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio mimicus
           MB-451]
          Length = 413

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     +     IS +    AK      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCRVTTTTISEEQFAYAKQKIAALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   L+ D +  +EG +D +VS
Sbjct: 244 LSEQITLLKQD-YRLLEGQYDKLVS 267


>gi|87308463|ref|ZP_01090604.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645]
 gi|87289020|gb|EAQ80913.1| UbiE/COQ5 methyltransferase [Blastopirellula marina DSM 3645]
          Length = 226

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 11/131 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A     P   +     +LD+GTGT  + +AL ++ P  + + +D+S   L +AK+N   
Sbjct: 37  CATFPLDPSATEGSFHDVLDVGTGTALIPIALCQKLPMARVMAIDMSTAMLTLAKANVDM 96

Query: 144 NGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIE-SVIVDCLGLEVRDFDPRISLDGGI 200
           +G+ +R      D   +     +FD+++SN         +  L   VR   P+       
Sbjct: 97  DGMLDRIQLAHIDAADTGYENEMFDLVISNSIVHHLEDPLPTLQEIVRVTRPQ------- 149

Query: 201 DGLSHYRTIAD 211
            G+   R +  
Sbjct: 150 -GMIFVRDLLR 159


>gi|260888376|ref|ZP_05899639.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185]
 gi|330838309|ref|YP_004412889.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185]
 gi|260861912|gb|EEX76412.1| SAM-dependent methyltransferase [Selenomonas sputigena ATCC 35185]
 gi|329746073|gb|AEB99429.1| Methyltransferase type 11 [Selenomonas sputigena ATCC 35185]
          Length = 285

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 35/181 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALE 135
           L    +  +   ++     RILD+G G+GA+ +A  K +P  + +GVD+     +  +  
Sbjct: 101 LARQIVEGTAAFVKLPAGGRILDVGCGSGALTIACAKGNPACQAIGVDLWRGVYASFSQR 160

Query: 136 IAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           I + NA   GV+   F    +      +  FD + SN  Y+   I    G          
Sbjct: 161 ICEENAAAEGVTNTEFRPGDALKLDFPDESFDAVTSN--YVYHNIPKISGQ--------- 209

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLC----SVEIG-YNQKVDVVRIFESRKLFLVNA 249
                        T+ +   R L K G+      +E G Y                 V  
Sbjct: 210 -------------TMLEETLRVLKKGGVFAIHDIMERGKYGDMEAFAAKLRDEGYEEVKL 256

Query: 250 F 250
            
Sbjct: 257 L 257


>gi|320012539|gb|ADW07389.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 385

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 61/175 (34%), Gaps = 35/175 (20%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDT 152
           E+    R++DLG G G V  A    +P    V  D S +A+  A++    N G     + 
Sbjct: 237 ERTGPDRVVDLGCGNGVVGTAAALANPDASVVFTDESYQAVASAEATFRDNTGPDAEAEF 296

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L  D  + V     D+++SNPP+     V                       +  R +  
Sbjct: 297 LVGDGTAGVPPASVDLVLSNPPFHSHQAVTD---------------------ATARNMFY 335

Query: 212 GVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
           G    L + G   V +G         + RIF +     V       G+ + ++  
Sbjct: 336 GARAALRQGGELWV-VGNRHLGYHTQLRRIFGNC----VTV----AGDPKFVVLR 381


>gi|148544923|ref|YP_001272293.1| cobalt-precorrin-6Y C(15)-methyltransferase [Lactobacillus reuteri
           DSM 20016]
 gi|184154260|ref|YP_001842601.1| cobalt-precorrin-6Y C(15)-methyltransferase [Lactobacillus reuteri
           JCM 1112]
 gi|227364063|ref|ZP_03848163.1| precorrin-6B methyltransferase [Lactobacillus reuteri MM2-3]
 gi|325683268|ref|ZP_08162784.1| precorrin-8W decarboxylase [Lactobacillus reuteri MM4-1A]
 gi|60172688|gb|AAX14522.1| precorrin-8w decarboxylase [Lactobacillus reuteri]
 gi|148531957|gb|ABQ83956.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Lactobacillus reuteri DSM 20016]
 gi|183225604|dbj|BAG26121.1| precorrin-8W decarboxylase CbiT [Lactobacillus reuteri JCM 1112]
 gi|227070985|gb|EEI09308.1| precorrin-6B methyltransferase [Lactobacillus reuteri MM2-3]
 gi|324977618|gb|EGC14569.1| precorrin-8W decarboxylase [Lactobacillus reuteri MM4-1A]
          Length = 184

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 32/167 (19%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              A S+ ++E  D    LD+G GTG++ +   +E P      ++++   ++I K N   
Sbjct: 17  EVRAISIDKLELNDKNTFLDIGAGTGSISIQAAREFPNLNVTAIEMNNAGIDIIKQNINK 76

Query: 144 NGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             +    + ++      +    +D I     ++                    LDG    
Sbjct: 77  FNL-HNINLIKGIAPQDIPNQKYDAI-----FVGGSGAQ--------------LDG---- 112

Query: 203 LSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
                 I    S HLN +G   +  I +   + V ++  S     + 
Sbjct: 113 ------IVKFASTHLNVNGTIVLNFILFENAMQVEKLLTSAGFKEIE 153


>gi|300173194|ref|YP_003772360.1| ribosomal protein L11 methyltransferase [Leuconostoc gasicomitatum
           LMG 18811]
 gi|299887573|emb|CBL91541.1| ribosomal protein L11 methyltransferase [Leuconostoc gasicomitatum
           LMG 18811]
          Length = 291

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 67/215 (31%), Gaps = 53/215 (24%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETE---------LLVDSALAFSLPRIEK------------ 95
           W+ +Y+ +      T  P  ET          +++D  L F     E             
Sbjct: 90  WKKYYHAQRITRHLTVVPSWETFKSQQSEEMPIIMDPQLTFGTGTHETTRLMMQALETVV 149

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  K       +  DI   ++++AK N + N ++     + S
Sbjct: 150 RGGESMIDVGTGSGVLAVA-AKLLGVRSVLATDIDDISVKVAKENLMLNPIATDIKVITS 208

Query: 156 DWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D   +V+    D+IV+N                      ++             +     
Sbjct: 209 DLLLNVDTQPVDLIVAN---------------------ILA--------DVIERLIPQTI 239

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
             L   G   V  I       +          +V 
Sbjct: 240 SRLKPTGYFLVSGIYDAIAPHIEEQLHINGFEIVQ 274


>gi|282163132|ref|YP_003355517.1| putative methyltransferase [Methanocella paludicola SANAE]
 gi|282155446|dbj|BAI60534.1| putative methyltransferase [Methanocella paludicola SANAE]
          Length = 295

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 35/145 (24%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI-------SCKALEIAKSNAV 142
           L  +      ++LD+G G+ A+ + L K+ P  +  GVD        S K  E    NA 
Sbjct: 118 LANLAWNGQGKLLDIGCGSAALTIKLAKKYPNARLTGVDFWGHNWSYSKKICE---KNAA 174

Query: 143 TNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             GVS+R    ++        +  FD +VSN  +           EVRD   +       
Sbjct: 175 AEGVSDRVTFQKASAMKLPFEDETFDAVVSNLTF----------HEVRDAKDK------- 217

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 + +     R L K G  + 
Sbjct: 218 ------KELIREALRVLKKGGKFTF 236


>gi|242240211|ref|YP_002988392.1| methyltransferase small [Dickeya dadantii Ech703]
 gi|262827972|sp|C6CB42|TRMN6_DICDC RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|242132268|gb|ACS86570.1| methyltransferase small [Dickeya dadantii Ech703]
          Length = 248

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
               R   RILD+G G+  + L L +          V++   A   A  N   +   +  
Sbjct: 41  WAPLRHESRILDVGCGSALISLMLAQRCEGRVPVDAVELDIAASVQAAENVAASPWRDTV 100

Query: 151 DTLQSDWFS---SVEGLFDVIVSNPPYIESV 178
              Q+D      +    + ++VSNPPY  + 
Sbjct: 101 VVHQADIVEFSCTTPHRYSLVVSNPPYFAAG 131


>gi|119489742|ref|ZP_01622500.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
 gi|119454316|gb|EAW35466.1| UbiE/COQ5 methyltransferase [Lyngbya sp. PCC 8106]
          Length = 219

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 28/133 (21%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                ++LD GTGT  + + + ++ P ++ + +D+S   L+I + N   +GV  +    +
Sbjct: 39  GPTTAQVLDAGTGTARIPILIAQQRPDWQIIAIDLSENMLKIGQQNVERSGVQTQVKLER 98

Query: 155 SDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            D      +E  FD+I+SN       I+  L   +                         
Sbjct: 99  VDAKQLPYIEAQFDLIISN------SIIHHLSNPIP--------------------FLRE 132

Query: 213 VSRHLNKDGLCSV 225
           + R L   G   +
Sbjct: 133 LKRVLKPQGGIFL 145


>gi|223934149|ref|ZP_03626092.1| ribosomal protein L11 methyltransferase [Streptococcus suis
           89/1591]
 gi|330833710|ref|YP_004402535.1| ribosomal protein L11 methyltransferase [Streptococcus suis ST3]
 gi|223897190|gb|EEF63608.1| ribosomal protein L11 methyltransferase [Streptococcus suis
           89/1591]
 gi|329307933|gb|AEB82349.1| ribosomal protein L11 methyltransferase [Streptococcus suis ST3]
          Length = 317

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDEVAVRVAQENIDLNANTSNIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V+   +VIV+N                      ++             + +   R
Sbjct: 229 DLLRGVDIKAEVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 260 LVKDEGYLIMSGIIADKWDMVRASAEAAGFFL 291


>gi|324997812|ref|ZP_08118924.1| methyltransferase small [Pseudonocardia sp. P1]
          Length = 201

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 14/136 (10%)

Query: 62  NVRLTLSSDTFEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++ L+  +  F        T++L+D+A   ++          +LD+G G G V L +   
Sbjct: 27  DLELSTDTGVFSHGRIDRGTKVLLDAAPMPAVRGP-------LLDVGCGYGPVALTIAAR 79

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                   VD++ +AL + ++NA   G+      +  D    +   F  I SNPP     
Sbjct: 80  RRRLPVWAVDLNERALGLTRANAGAAGLGNVTACVPDDVPGDLS--FAGIYSNPPI--RS 135

Query: 179 IVDCLGLEVRDFDPRI 194
               L   +  + PR+
Sbjct: 136 GKPALHELLLRWLPRL 151


>gi|313887956|ref|ZP_07821635.1| RNA methyltransferase, RsmD family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846122|gb|EFR33504.1| RNA methyltransferase, RsmD family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 188

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 43/203 (21%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G R    ++L ++    + RP  + + +S              V +LDL  G+GA  +
Sbjct: 4   ISGNR--RGLKL-IAPKGLDTRPTEDRVKESVFNILGQNFFD---VTVLDLFCGSGANGI 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVS 170
             L      K   VD S +A++  K N     ++++   +++       +++  FD I  
Sbjct: 58  EFLSRGAE-KAYFVDKSKEAIDCVKKNLDKAKLTDQAIVIENHLNQAMKNLDTEFDYIYM 116

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSVEIG 228
           +PP                F+ R            Y+     +  H  L  +G   VE  
Sbjct: 117 DPP----------------FERR----------DLYKKAFKLIREHRILKPNGKLIVEYN 150

Query: 229 YNQKVDVVRIFESRKLFLVNAFK 251
            ++      +        +   K
Sbjct: 151 TDKP-----LLIGEGFVEIKNKK 168


>gi|256393744|ref|YP_003115308.1| cyclopropane-fatty-acyl-phospholipid synthase [Catenulispora
           acidiphila DSM 44928]
 gi|256359970|gb|ACU73467.1| Cyclopropane-fatty-acyl-phospholipid synthase [Catenulispora
           acidiphila DSM 44928]
          Length = 442

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +++   +R+LD+G G G++ +         + VG+ IS    E+A+      G
Sbjct: 202 LICRKLGLDRGPGMRLLDVGCGWGSMAIHAATHY-GARVVGITISAAQAELARERVAAAG 260

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           VS++ +    D+       FD I S
Sbjct: 261 VSDQVEIRLQDYRDLSGERFDAISS 285


>gi|220932115|ref|YP_002509023.1| ribosomal protein L11 methyltransferase [Halothermothrix orenii H
           168]
 gi|219993425|gb|ACL70028.1| ribosomal protein L11 methyltransferase [Halothermothrix orenii H
           168]
          Length = 289

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 38/196 (19%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVD----------------SALAFSLPRIEK 95
           W  ++       R  +       R  T  +++                  +         
Sbjct: 91  WHKYFKPIPVGDRFIVCPSWENCRDNTRKIIEIDPGMAFGTGNHETTRMCVKLIEKYTST 150

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            ++  +LD+G GTG + + +       + VG+D    A++ A+ NA  NGV +  + +  
Sbjct: 151 YNIKNMLDVGCGTGILSI-VGAMLDVKEVVGIDRDRAAIKAARENARINGVEDFVNFVLQ 209

Query: 156 DWFSSVEGLFDVIVSN-PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG-- 212
           D    V G + ++V+N  P+I   ++  L   V++           +G      I +   
Sbjct: 210 DASDKVTGNYSLVVANLLPHIIYKVLPNLISVVQN-----------NGFLILSGIIEEET 258

Query: 213 --VSRHLNKDGLCSVE 226
             ++  L   G   +E
Sbjct: 259 EGIATVLVNSGFNLLE 274


>gi|294629766|ref|ZP_06708326.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           e14]
 gi|292833099|gb|EFF91448.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           e14]
          Length = 438

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 70/201 (34%), Gaps = 35/201 (17%)

Query: 33  RQRFFLTNAIVRSLKHESI--HRILGWRDFYNVRL---TLSSDTFEPRPETELLVDSALA 87
            +     +   R     +I  H  +G  DFY + L    + S  + P PE +  ++ A  
Sbjct: 130 EEVRRPGHLHTRRTDRRAISHHYDVGN-DFYGLVLGPSMVYSCAYWPAPEPDATLEQAQH 188

Query: 88  FSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L  I ++       R+LD+G G G++ +   +E      VGV +S +    A+     
Sbjct: 189 DKLELISRKLALKPGQRLLDVGCGWGSMAIHAAREH-GVSVVGVTLSQEQAVYARKRVAD 247

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G++++ +    D+    +G +D I S       + +       R  +            
Sbjct: 248 EGLTDKVEIRVQDYRDVTDGPYDAISS-------IGMAEHVGAARYLEY----------- 289

Query: 204 SHYRTIADGVSRHLNKDGLCS 224
                 A  +   L   G   
Sbjct: 290 ------ASDLHALLKPGGRLL 304


>gi|158424062|ref|YP_001525354.1| cyclopropane-fatty-acyl-phospholipid synthase [Azorhizobium
           caulinodans ORS 571]
 gi|158330951|dbj|BAF88436.1| cyclopropane-fatty-acyl-phospholipid synthase [Azorhizobium
           caulinodans ORS 571]
          Length = 407

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 34/185 (18%)

Query: 47  KHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIE-KRDVVR 100
           K+ S H  LG  DFY + L    T SS  FEP   +      A LA     ++      R
Sbjct: 138 KNISFHYDLGN-DFYRLWLDPSMTYSSAIFEPPTLSLEEAQDAKLARIGSWLDIGAAGTR 196

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           IL++G G GA+   L          G+ +S + L  A+      G++ER D    D +  
Sbjct: 197 ILEIGCGWGALASKLAHM--GAHVTGLTLSKEQLAFAQERIAREGMAERVDLRLQD-YRD 253

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           V G FD IVS         ++ L      + P             Y      + +HL   
Sbjct: 254 VVGQFDRIVS---------IEMLEAVGEQYWP------------VY---FGAIKKHLVPG 289

Query: 221 GLCSV 225
           G+  +
Sbjct: 290 GVAVL 294


>gi|154496941|ref|ZP_02035637.1| hypothetical protein BACCAP_01234 [Bacteroides capillosus ATCC
           29799]
 gi|150273765|gb|EDN00882.1| hypothetical protein BACCAP_01234 [Bacteroides capillosus ATCC
           29799]
          Length = 241

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 57/176 (32%), Gaps = 35/176 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI---- 136
           +++      L  ++     ++LD+G G+GA+ + +    P  +  G+D    A       
Sbjct: 90  MMERVHHTVLSYLDFDGQGQLLDVGCGSGALSIRVALIWPDAQVTGIDYWGAAYGYGQIM 149

Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            + N+ + GV+ R      D       +  FD +VSN  Y      D             
Sbjct: 150 CERNSASEGVAARCRFQHGDANHLDFTDESFDAVVSNYVYHNITSADK------------ 197

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--EI---GYNQKVDVVRIFESRKLF 245
                       R +     R L K G+ ++  E+    Y    +  +        
Sbjct: 198 ------------RALLMETLRVLKKGGVFALNDEMKPRMYGDMEEFAQELRDMGYQ 241


>gi|153809759|ref|ZP_01962427.1| hypothetical protein RUMOBE_00140 [Ruminococcus obeum ATCC 29174]
 gi|149833937|gb|EDM89017.1| hypothetical protein RUMOBE_00140 [Ruminococcus obeum ATCC 29174]
          Length = 462

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  +S  TF       L  +         I+    + + DL +GTG
Sbjct: 273 LYGQDYFYETLLGLKFRIS--TFSFFQPNSLAAEVLYNIVRDYIQNTSGMEVFDLYSGTG 330

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLF 165
            +   L    P  K  +GV+I   A+  A+ NA  NG+ +    +  D       +    
Sbjct: 331 TIAQLLA---PVAKEVIGVEIVEDAVAAARENAKLNGL-DNCKFIAGDVLKVLDDLTEKP 386

Query: 166 DVIVSNPP 173
           DVIV +PP
Sbjct: 387 DVIVLDPP 394


>gi|46914918|emb|CAG21693.1| putative ribosomal protein L11 methyltransferase [Photobacterium
           profundum SS9]
          Length = 317

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 52/210 (24%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P    +L+D  LAF           L  ++ +D+V   I+D G 
Sbjct: 132 FGRRLWICPSWREAPEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGC 191

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     K +G+DI  +A++ ++ NA  NGVS++            +   D
Sbjct: 192 GSGILAIAALKLGAE-KVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQ-DQPTDVQAD 249

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-- 224
           V+V+N           L   +R+  P              +++           G  +  
Sbjct: 250 VVVAN----------ILAGPLRELSP------------VIKSLV-------KPGGKLAIS 280

Query: 225 --VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             +EI   Q  DV   +           +D
Sbjct: 281 GVLEI---QAEDVSTYYSDELALDPVVARD 307


>gi|218282386|ref|ZP_03488668.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989]
 gi|218216672|gb|EEC90210.1| hypothetical protein EUBIFOR_01250 [Eubacterium biforme DSM 3989]
          Length = 217

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 24/189 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++L   S+ F    +T+LL              +   RILD+GT  GA+ +    +   
Sbjct: 12  DLKLYQDSEHFRFNTDTKLLAQFV--------RLKKQERILDIGTNNGALLVYF-DQFHI 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VGV++  +  ++A+ NA    +      +       V+ LFDV+VSNPPY +     
Sbjct: 63  KELVGVEVLEETSKVAQKNA-DCFIKHPVKIVNQPIQEYVDDLFDVVVSNPPYFKMNANQ 121

Query: 182 CLGLEVRDF----DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
                        +  ++L            +    +R L   G   +    N+  ++ +
Sbjct: 122 KPEHLNFRHLGRMEENLTL----------EQLVFHANRLLKSYGRFYMVHRPNRLNEINK 171

Query: 238 IFESRKLFL 246
           +       +
Sbjct: 172 VLYDNNFSI 180


>gi|194468459|ref|ZP_03074445.1| conserved hypothetical protein [Lactobacillus reuteri 100-23]
 gi|194453312|gb|EDX42210.1| conserved hypothetical protein [Lactobacillus reuteri 100-23]
          Length = 251

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  +  R   R  ++I+DL  G GA+ + L  +        V++  +  ++A+   +
Sbjct: 35  DAVLLANFVRPNHRQKLKIVDLCAGNGAIGIFLHDKLGG-TFTEVELQPQIADMAERTIL 93

Query: 143 TNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE 176
            N + +R+  +  D  +  +       D+++ NPPY  
Sbjct: 94  LNDLQDRYTVINDDIANINDYISKDSIDIVLCNPPYFP 131


>gi|168044055|ref|XP_001774498.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674210|gb|EDQ60722.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 208

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +           + DLG G G + +A        + VGVD+   AL +A+ N    
Sbjct: 36  MLYMAENSFGDITGKVVADLGCGCGTLGIAAALLDAG-QVVGVDVDEDALALAQENCEEL 94

Query: 145 GVSERFDTLQSDWFS-SVEGL-FDVIVSNPPYIESVIVDCLG 184
            V    D +Q++     ++GL  D +V NPP+        + 
Sbjct: 95  EVE--MDLIQANLSELPLQGLVVDTVVMNPPFGTRRKGADME 134


>gi|312622544|ref|YP_004024157.1| methyltransferase type 12 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203011|gb|ADQ46338.1| Methyltransferase type 12 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 389

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD    TG   +   K     K +GVDIS  A+E A  NA  N V  + + + ++ F  
Sbjct: 218 ILDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNEVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|319941749|ref|ZP_08016071.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis
           3_1_45B]
 gi|319804682|gb|EFW01549.1| ribosomal protein L11 methyltransferase [Sutterella wadsworthensis
           3_1_45B]
          Length = 298

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD G GTG + +   K+    +  G DI  +A+E A+ NA+ N V  +F  L +
Sbjct: 162 KSADRVLDYGCGTGILAIG-AKKLGAAEVCGTDIDPQAVEAARDNAIRNDVEAQF-WLPA 219

Query: 156 DWFSSVEGLFDVIVSN 171
           D     EG F ++V+N
Sbjct: 220 DM---PEGTFSIVVAN 232


>gi|161502807|ref|YP_001569919.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864154|gb|ABX20777.1| hypothetical protein SARI_00858 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 189

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|183603736|ref|ZP_02716739.2| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183573253|gb|EDT93781.1| ribosomal protein L11 methyltransferase [Streptococcus pneumoniae
           CDC0288-04]
          Length = 317

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIDLNTGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V +  ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRQSAESAGFFL 291


>gi|154495970|ref|ZP_02034666.1| hypothetical protein BACCAP_00253 [Bacteroides capillosus ATCC
           29799]
 gi|150274853|gb|EDN01909.1| hypothetical protein BACCAP_00253 [Bacteroides capillosus ATCC
           29799]
          Length = 400

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD  T TGA  L         + +GVD S   +  A+ NA  NGV +R   L  D
Sbjct: 222 HGKRVLDCFTHTGAFALNAAVAGAR-EVIGVDASETGVRQAEENARLNGVEDRVKFLCRD 280

Query: 157 WFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            F  +         FDV++ +PP   +   D +   VR +
Sbjct: 281 VFDLLPEMDRNGERFDVVILDPPAF-TKSRDSVKKAVRGY 319


>gi|47459066|ref|YP_015928.1| O-methyltransferase putative nucleic acid modification enzyme
           [Mycoplasma mobile 163K]
 gi|47458395|gb|AAT27717.1| O-methyltransferase putative nucleic acid modification enzyme
           [Mycoplasma mobile 163K]
          Length = 257

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 31/210 (14%)

Query: 65  LTLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           L   S+ F  + +T     VD+ L  +   I  +    IL++GT   A+ + + + +   
Sbjct: 14  LGFDSNLFIYQDKTMFNYSVDTILLGNFCSINSK-TKSILEIGTNNAALAIFVSERNKNI 72

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPPY- 174
           K   +++  KA+ +A  N + N   E+   + +++ S  +         +D I+ NPP+ 
Sbjct: 73  KIDAIELQKKAIHLANFNVIMNSKEEQISIIHANFNSFWKKHNKNQAKKYDSIICNPPFY 132

Query: 175 -IESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            I    +  +  E  +  +D +++ D           +  G S+ + + G  SV I   +
Sbjct: 133 QIGKRQLKNVSKEKLIATYDLKLNFD----------QLIKGASKIIKQKGYFSVVIPTER 182

Query: 232 KVDVVRIFESRKL--FLVNAFKDYGGNDRV 259
            +D   I          V        + R+
Sbjct: 183 SIDFFTILRKYDFEPKKVQFI-----HPRI 207


>gi|308188308|ref|YP_003932439.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1]
 gi|308058818|gb|ADO10990.1| ribosomal protein L11 methyltransferase [Pantoea vagans C9-1]
          Length = 293

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 30/145 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVS+R       
Sbjct: 158 EGKTVIDFGCGSGILAIA-ALKLGAAQAIGIDIDPQAIQASRDNAKRNGVSDRLSL---- 212

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                            Y+     D L  +V   +    L G +  L+    +      H
Sbjct: 213 -----------------YLPHQQPDNLQADVVVANI---LAGPLRELAPLIRVLPKSGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241
           L   G+       +Q   V   + S
Sbjct: 253 LGLSGVL-----ESQAESVCEAYAS 272


>gi|154151708|ref|YP_001405326.1| methyltransferase small [Candidatus Methanoregula boonei 6A8]
 gi|154000260|gb|ABS56683.1| methyltransferase small [Methanoregula boonei 6A8]
          Length = 202

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++DLG GTG + +         +  G DI  +AL  A+ NA   G    F          
Sbjct: 51  VMDLGCGTGILAIGAALLGAR-EVRGTDIDPEALRTAEKNAALLGADVTFIAADVGSTEK 109

Query: 161 VEGLFDVIVSNPPY 174
           ++   D +V NPP+
Sbjct: 110 ID-PCDTVVMNPPF 122


>gi|154498173|ref|ZP_02036551.1| hypothetical protein BACCAP_02154 [Bacteroides capillosus ATCC
           29799]
 gi|150272720|gb|EDM99888.1| hypothetical protein BACCAP_02154 [Bacteroides capillosus ATCC
           29799]
          Length = 271

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 41/184 (22%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++      +L++G G+GA+ +      P  K  G+D    A+      
Sbjct: 87  IMEQVHRVVLSHLDYDGQGSLLEVGCGSGALSIRAALTWPETKVTGMD-YWGAVYNYSKA 145

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + + NA + GV+ R      D       +  FD ++SN  Y+   I+             
Sbjct: 146 LCEKNAASEGVASRCVFRHGDANHLDFPDESFDAVISN--YVYHNIM------------- 190

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-------YNQKVDVVRIFESRKLFL 246
                G D       +     R L K G+ ++          Y       +         
Sbjct: 191 -----GAD----MHKLLLESLRVLKKGGVFAL--NDDMKPKLYGDMDAFAQKLREMGYQD 239

Query: 247 VNAF 250
           V   
Sbjct: 240 VRLI 243


>gi|315195481|gb|EFU25868.1| putative methyltransferase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 312

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++D+GTG+G   L++        +   +DI   A+ +AK N   N      + +  
Sbjct: 173 PQHSVIDVGTGSGI--LSIASYLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +        FD++++N   I + I+D +  +  +
Sbjct: 231 NLLKDETEKFDIVIAN---ILAHIIDEMIDDAYN 261


>gi|157953202|ref|YP_001498093.1| hypothetical protein AR158_C011L [Paramecium bursaria Chlorella
           virus AR158]
 gi|156067850|gb|ABU43557.1| hypothetical protein AR158_C011L [Paramecium bursaria Chlorella
           virus AR158]
          Length = 373

 Score = 61.3 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 16/133 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +   IL+   GTG +    ++  P     GV++     ++ K     +   E  + +  
Sbjct: 45  DEPKNILEPSCGTGEIISDCIERFPSANITGVELDKDIYDVCKR----SYTRENVNIIND 100

Query: 156 DWFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D+ +   G FD IV NPP+ +           VR    R +L            +   ++
Sbjct: 101 DFLAWKGGKFDFIVGNPPFVVRPKGHKNDDRIVRG---RSNLY--------VEFLFKCIT 149

Query: 215 RHLNKDGLCSVEI 227
            HL +DG+ +  I
Sbjct: 150 EHLKEDGILAFII 162


>gi|253999009|ref|YP_003051072.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           SIP3-4]
 gi|253985688|gb|ACT50545.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           SIP3-4]
          Length = 424

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++      ++++GTG G   +         K     IS    ++A+      G
Sbjct: 186 LERICQKLQLSPADHVVEIGTGWGGFAIYAASHY-GCKVTTTTISQAQYDLAQQRVAAAG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +S++ + L +D +  +EG +D +VS            +   V              G   
Sbjct: 245 LSDKINILLTD-YRELEGQYDKLVS----------IEMIEAV--------------GYQF 279

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y T     +R L  +G+  +
Sbjct: 280 YDTYFAQCARLLKPEGMMLL 299


>gi|229159971|ref|ZP_04287976.1| Methyltransferase type 11 [Bacillus cereus R309803]
 gi|228623494|gb|EEK80315.1| Methyltransferase type 11 [Bacillus cereus R309803]
          Length = 212

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 45/210 (21%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   LS   ++                + ++   +  +ILD+GTG+G++ + L K 
Sbjct: 4   PFIYIAFILSYSVYQFAAFGGNYQSKIHDLIVAKVNWDEKGKILDIGTGSGSLIIKLAKT 63

Query: 119 SPFFKGVGVD---------ISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDV 167
            P     G+D          S       + NA   GVS R D L++        +  FD+
Sbjct: 64  FPKSFLTGIDYWGGNWEYSKSK-----CQQNAEIEGVSNRIDFLKASAAELPFTDNEFDI 118

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-- 225
           IVS   +           EV+D + +               +     R L   G      
Sbjct: 119 IVSCLTF----------HEVKDEENKT-------------EVIKEALRVLKPGGGFVFLD 155

Query: 226 ----EIGYNQKVDVVRIFESRKLFLVNAFK 251
               E  +  + +++   +   +  +N++K
Sbjct: 156 LFMDEKIFGTEKELLNALKKHGVSELNSYK 185


>gi|163736266|ref|ZP_02143685.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
           gallaeciensis BS107]
 gi|161390136|gb|EDQ14486.1| Cyclopropane-fatty-acyl-phospholipid synthase [Phaeobacter
           gallaeciensis BS107]
          Length = 401

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            ++  + S H  LG   FY + L    T SS  F+   E+     +A  A  + ++  + 
Sbjct: 127 AQAKANISYHYDLGNA-FYGLWLDDTMTYSSALFKTGQESLEAAQTAKYASMVDQMGVKP 185

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       +E    +  G+ IS + L+ A+      G+S++      D 
Sbjct: 186 GDHVLEVGCGWGGFAEYAARER-GLRVTGLTISEEQLKYARERIEKAGLSDQVKLRMQD- 243

Query: 158 FSSVEGLFDVIVS 170
           +   EG FD I S
Sbjct: 244 YRDCEGTFDGIAS 256


>gi|90577748|ref|ZP_01233559.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio angustum S14]
 gi|90440834|gb|EAS66014.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio angustum S14]
          Length = 413

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 7/168 (4%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLT-NAIVRSLKHESIHRILG---WRDFYNV 63
                 +T L   +  +   S + ++    L  N I  + K+ S H  LG   +R F + 
Sbjct: 98  RVLAKNLTTLDKLEAKMGWMSRISEQIGHLLRKNTIKNARKNISAHYDLGNDLYRHFLDP 157

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +  SS  +  + +T           L  +++  +   +L++GTG G + +   K     
Sbjct: 158 NMLYSSAIYLNKNDTLDQAQWNKMDRLCQKLKLTEDDHLLEIGTGWGGMAIHAAKYY-GC 216

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +     IS +    AK      G+S+R   L  D +  + G +D +VS
Sbjct: 217 RVTTTTISEQQYLWAKERVEKEGLSDRITLLMDD-YRDLTGQYDKLVS 263


>gi|110668320|ref|YP_658131.1| methyltransferase [Haloquadratum walsbyi DSM 16790]
 gi|109626067|emb|CAJ52518.1| probable methyltransferase [Haloquadratum walsbyi DSM 16790]
          Length = 249

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 29/152 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD GTGTG +   L +          +I  +  ++A+ N    GV++  +    D   
Sbjct: 93  RVLDAGTGTGVLAAYLGRL--GATVTSYEIDPEFADVARENMSLAGVTDAVEVRTGDLTV 150

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +    FD +            D    +V      ++LD G         I +     L  
Sbjct: 151 A----FDTV-----------ADEGPFDV------LTLDTGDAP-----AIIEQAQTLLAS 184

Query: 220 DGLCSVEIGY-NQKVDVVRIFESRKLFLVNAF 250
            G  +V + +     DVV       +  +  +
Sbjct: 185 GGYIAVYVPFIEHTRDVVEAAREAGVGAIKTY 216


>gi|330957099|gb|EGH57359.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 398

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGAADVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|229588462|ref|YP_002870581.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas fluorescens SBW25]
 gi|229360328|emb|CAY47185.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas fluorescens SBW25]
          Length = 332

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  ++K     +LD G G G +  A+ +  P      +D+   A   ++    
Sbjct: 177 DRGTELLLAHLDKLPSGHLLDFGCGAGVLGAAVKRRYPHNTVTMLDVDAFAAASSRLTLT 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + L  D   +     + I+SNPP+   V  D    E                
Sbjct: 237 ANGLEA--EVLTGDGIDAAPMGLNAILSNPPFHVGVHTDYFATE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    ++HL K G  
Sbjct: 279 -----NLLRKAAKHLAKGGEL 294


>gi|188585811|ref|YP_001917356.1| ribosomal protein L11 methyltransferase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350498|gb|ACB84768.1| ribosomal protein L11 methyltransferase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 324

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 20/134 (14%)

Query: 57  WRDFYNVR----LTLSSDTFEPR--PETELLVD------------SALAFSLPRIEKRDV 98
           W+++Y       +T+      P    +T + +D            + +  S  +   +  
Sbjct: 129 WKEYYQPVNVNGITVRPTWTSPDNNEQTTIWLDPGMAFGTGTHPTTIMCISFLKQYLQGN 188

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            +++DLG G+G + +A  K     K    DI   A  +A  NA  N V +  D  + D  
Sbjct: 189 EKVIDLGCGSGILSIAAAKLGVE-KVFAYDIDSVACRVAGQNANLNEVRDLIDIKRGDVK 247

Query: 159 SS-VEGLFDVIVSN 171
              VE   DV+V N
Sbjct: 248 KQVVEEKADVVVGN 261


>gi|154297622|ref|XP_001549237.1| hypothetical protein BC1G_12656 [Botryotinia fuckeliana B05.10]
 gi|150858479|gb|EDN33671.1| hypothetical protein BC1G_12656 [Botryotinia fuckeliana B05.10]
          Length = 261

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 39/188 (20%)

Query: 70  DTFEPRPETELLVD--------SALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKE 118
             +EP  ++ LL+D          L    PR E+        I+++GTG+G V   +   
Sbjct: 14  RIYEPAEDSFLLLDTLSSASEKEFLRQRFPRSEQSSISPSPLIVEVGTGSGVVLSFVHAH 73

Query: 119 ------SPFFKGVGVDISCKALEIAKSNA---------VTNGVSERFDTLQSDWFSSVE- 162
                        GVD++  A E  +                       +  +  +S++ 
Sbjct: 74  AEIIFGRADILTAGVDVNRYACEATQETVRVAEKEQASQNLSHGSYLGNVVGNLGTSLKS 133

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDP----------RISL--DGGIDGLSHYRTIA 210
           G+ DV++ NPPY+ S  V    L     +            ++L   GG+DG+     + 
Sbjct: 134 GMTDVLIFNPPYVPSPDVPIPELSGAGNEDGSLSYEGDSKLLALSYAGGVDGMEITDRLI 193

Query: 211 DGVSRHLN 218
           D +   LN
Sbjct: 194 DALPEVLN 201


>gi|119193420|ref|XP_001247316.1| hypothetical protein CIMG_01087 [Coccidioides immitis RS]
          Length = 240

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  +     +    ++D   G G   +A  + + + +   ++ +  +L+ A
Sbjct: 54  TPEPVANKIAAHMTAAAPQKKSIVIDTFAGVGGNAIAFARSNKWRRVYAIEKNPASLQCA 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV ++    Q D F  ++        + VI ++PP+            +   +
Sbjct: 114 KHNAKIYGVEDKITWFQGDCFEILKTQLKDLAPYSVIFASPPWGGPGYRSDKVFNLSTME 173

Query: 192 P 192
           P
Sbjct: 174 P 174


>gi|84489817|ref|YP_448049.1| methyltransferase [Methanosphaera stadtmanae DSM 3091]
 gi|84373136|gb|ABC57406.1| predicted methyltransferase [Methanosphaera stadtmanae DSM 3091]
          Length = 340

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 22/140 (15%)

Query: 45  SLKHESIHRILG-------WRDFYNVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEK 95
               E +  I G        ++F  +R  L+  T  F PR         A        E 
Sbjct: 142 RRTRE-LEHIAGIDNLETIHKEF-GIRFKLNPSTVYFSPR--------LATERLRVVKEV 191

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   I+D   G G+  +++       K   VDI+ +A +  + N   N +      ++ 
Sbjct: 192 KENEVIIDFFAGIGSFPISIA-HRKNAKIYSVDINPEAYKYVQENIKLNKLVGTVIPIEG 250

Query: 156 DWFSSVEG--LFDVIVSNPP 173
           D    ++   L + I+ N P
Sbjct: 251 DIRKVIDKLPLANRIIMNLP 270


>gi|55820235|ref|YP_138677.1| ribosomal protein L11 methyltransferase [Streptococcus thermophilus
           LMG 18311]
 gi|55822126|ref|YP_140567.1| ribosomal protein L11 methyltransferase [Streptococcus thermophilus
           CNRZ1066]
 gi|81820368|sp|Q5M1S5|PRMA_STRT1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|81820530|sp|Q5M6B7|PRMA_STRT2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|55736220|gb|AAV59862.1| 50S ribosomal protein L11 methyltransferase [Streptococcus
           thermophilus LMG 18311]
 gi|55738111|gb|AAV61752.1| 50S ribosomal protein L11 methyltransferase [Streptococcus
           thermophilus CNRZ1066]
          Length = 317

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPGMENIHVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQEADVIVAN---------------------ILA--------DILIHLMEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
            +  +G   +   I       V  + E    
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVRELAEKAGF 289


>gi|332883049|gb|EGK03333.1| hypothetical protein HMPREF9456_01970 [Dysgonomonas mossii DSM
           22836]
          Length = 236

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 12/147 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ILD+GTGTG + L + + +       +DI   A+  AK N   +    R ++  +     
Sbjct: 40  ILDVGTGTGLISLMMAQRNEKTIIDAIDIDSDAVSQAKDNIENSPFGNRINSWNASLQEF 99

Query: 160 --SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
               E  ++VIVSNPP+    +           +   SL    D L     +    +  L
Sbjct: 100 SSKAEKRYNVIVSNPPFFVQSLKSP--------NKERSLARHTDSLPV-EDLIGLSASLL 150

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKL 244
           ++ G  S    ++ K +++++ E  KL
Sbjct: 151 SQRGRMSFIYPFDYKTELIKLAEQYKL 177


>gi|312138720|ref|YP_004006056.1| methyltransferase [Rhodococcus equi 103S]
 gi|311888059|emb|CBH47371.1| putative methyltransferase [Rhodococcus equi 103S]
          Length = 377

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 22/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+    +DLG GTG + ++L K  P  + +  D S  A+  A + A  NGV+ R   ++ 
Sbjct: 231 REAGTAVDLGCGTGILAVSLAKAQPSAEVIASDQSAAAVASAAATARANGVAARVRVIRD 290

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  SS+ E   D+I+ NPP+     V                  G  G      + D   
Sbjct: 291 DALSSLPESSVDLILCNPPFHVGAAVHT----------------GSAG-----KMFDAAG 329

Query: 215 RHLNKDGLCS 224
           R L   G   
Sbjct: 330 RVLRPGGELW 339


>gi|224006790|ref|XP_002292355.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971997|gb|EED90330.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 203

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 1/113 (0%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +          E  P +  L  S +  ++ + +      ILDLG GTG + L     +  
Sbjct: 15  HRVFPNPKIELEQYPTSFQLTSSIVLTAISKNDAGPNRTILDLGCGTGMLGLGFAIAN-C 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
                VD   +ALE+A+ N       E   T           L D +++NPP+
Sbjct: 74  SSVYLVDCDDEALEMARENVEYLVEEELIGTECDGVDGEGGCLVDTVITNPPF 126


>gi|163745679|ref|ZP_02153039.1| hypothetical protein OIHEL45_08810 [Oceanibulbus indolifex HEL-45]
 gi|161382497|gb|EDQ06906.1| hypothetical protein OIHEL45_08810 [Oceanibulbus indolifex HEL-45]
          Length = 255

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 16/163 (9%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD  L      +E      +L+LG G GA  L L    P     G ++     ++A+ N 
Sbjct: 34  VDPVL--LAASVEAAAGQSVLELGCGVGAAVLCLSARVPGLALTGCELQPAYADLARRNG 91

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP-RISLDGGI 200
                    D          +  FD +++NPPY +          V+  DP R +  G  
Sbjct: 92  GDVLEVVEADLTDMPLHLR-QRQFDHVLANPPYFDRA------ASVQSRDPGREAALGEA 144

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
             L   R      ++ L   G         +   +  +  +  
Sbjct: 145 TPL---RQWVRIAAKRLKPKGQAHFIH---RAERLPELLAALP 181


>gi|332140138|ref|YP_004425876.1| putative ribosomal RNA small subunit methyltransferase D
           [Alteromonas macleodii str. 'Deep ecotype']
 gi|229470498|sp|B4RZB4|RLMG_ALTMD RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|327550160|gb|AEA96878.1| putative ribosomal RNA small subunit methyltransferase D
           [Alteromonas macleodii str. 'Deep ecotype']
          Length = 410

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 32/171 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +       ++DLG G G + +  L  +P  K + VD S  ALE A+ N +
Sbjct: 246 DIGARIMLEHMTVSANDVVVDLGCGNGVLGVNALSLAPDAKVIFVDESYMALESARLNVL 305

Query: 143 TNGVS--ERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            N     E+ + + S+   ++           I+ NPP+ +   +             I+
Sbjct: 306 NNFPDKIEQCEFVASNCLETLLNRENKPAVTKILCNPPFHQQNAITD----------HIA 355

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV---DVVRIFESRK 243
                        +       L K G   V +G         + ++F   K
Sbjct: 356 W-----------QMFTDSRDLLVKSGHLVV-VGNRHLEYHIKLKKLFGGAK 394


>gi|332031558|gb|EGI71030.1| Trimethylguanosine synthase [Acromyrmex echinatior]
          Length = 1035

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G+  +         + + +DI    ++IA+ NA   GV +R + +  D+   
Sbjct: 880 IIDAFCGAGSNAIQFA--FTCERVIAIDIDPDKIKIARHNAGIYGVDDRIEFITGDFLQL 937

Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
              L  DV+  +PP+      D +  +V D +  +   GG       R I   V+ +L
Sbjct: 938 APQLVADVVFLSPPW---GGPDYIKRKVFDLESIMPPIGGRSIFEAARRITQHVAYYL 992


>gi|327183783|gb|AEA32230.1| hypothetical protein LAB52_06505 [Lactobacillus amylovorus GRL
           1118]
          Length = 343

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  SLRIIQDKTAFSFSMDTLLLAYWAKGLI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    + +  ++ +      +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEIYSQAVRSVELNDMENRISVYRDNVLNAPKFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  + +    R  L      L     I    S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHEL------LIDLEHIIAVASGLLKMKGKMFMVH 173


>gi|327314563|ref|YP_004330000.1| 50S ribosomal protein L11 methyltransferase [Prevotella denticola
           F0289]
 gi|326944350|gb|AEA20235.1| ribosomal protein L11 methyltransferase [Prevotella denticola
           F0289]
          Length = 288

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R LD G GTG + + +       + V  DI   ++  A+ NA  NGV    D L+ D
Sbjct: 151 KGKRTLDCGCGTGILSI-VAARCGAREAVCYDIDEWSVRNARHNAELNGVE--IDVLEGD 207

Query: 157 --WFSSVEGLFDVIVSN 171
               S V G+FDVI++N
Sbjct: 208 KSVLSHVNGVFDVIMAN 224


>gi|222148043|ref|YP_002549000.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium vitis
           S4]
 gi|221735031|gb|ACM35994.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium vitis
           S4]
          Length = 430

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNG 145
                ++  +   R+LD+G G G + L L   +   + VGV +S + L  A         
Sbjct: 185 DHLAAKLRLKSGNRVLDIGCGWGGLALHLANRAVGGEVVGVTLSEEQLAYALKRPRKPAT 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            +   D    D + S++G FD IVS                V  F+          GL+ 
Sbjct: 245 EAANVDFRLMD-YRSLDGKFDRIVS----------------VGMFE--------HVGLAA 279

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           YRT  +  S  L  DG+  +
Sbjct: 280 YRTFFNKCSTLLADDGVMVL 299


>gi|193214995|ref|YP_001996194.1| Mg-protoporphyrin IX methyl transferase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088472|gb|ACF13747.1| magnesium protoporphyrin O-methyltransferase [Chloroherpeton
           thalassium ATCC 35110]
          Length = 233

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 17/145 (11%)

Query: 27  DSVLDDRQRFFLTNAIV-RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA 85
           D  L   +     N I  +         I G ++  ++R T+       R     ++  A
Sbjct: 7   DVELHKEELQSYFNGIGFQR-----WSAIYGQKEVSSIRKTV-------RDGHAQMMAQA 54

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            ++ +          ILD G GTG   +A+ K    F    +DI+ + +E AK +A   G
Sbjct: 55  ESWLMSH-NLPKGATILDAGCGTGLFSIAIAKR--GFNVTAIDIAAQMVEQAKVDAKREG 111

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           V++R +    D   S+ G FD +V 
Sbjct: 112 VADRINFNVGDL-ESISGSFDAVVC 135


>gi|163859173|ref|YP_001633471.1| ribosomal protein L11 methyltransferase [Bordetella petrii DSM
           12804]
 gi|163262901|emb|CAP45204.1| Ribosomal protein L11 methyltransferase [Bordetella petrii]
          Length = 276

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P P      + A+A  L          ++DLG+G G + +A +++    +  GVDI  
Sbjct: 40  FVPTP------EDAVAKMLDMAYVGPQDTVIDLGSGDGRIAIAAVRDRKAARATGVDIDP 93

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + +  A++NA   GV +R   +Q + F 
Sbjct: 94  ERIAEARANAKHAGVQDRVRFVQQNLFE 121


>gi|313201115|ref|YP_004039773.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           MP688]
 gi|312440431|gb|ADQ84537.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           MP688]
          Length = 429

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 33/170 (19%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           F +  +  SS  F  R +  L  + A    L     +++      ++++GTG G   +  
Sbjct: 164 FLDPTMMYSSAIFA-RDDMTL--EQASLHKLERICQKLQLSPADHVVEIGTGWGGFAIYA 220

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
                  K     IS    ++A+    T G+ ++ + L +D +  +EG +D +VS     
Sbjct: 221 ASHY-GCKVTTTTISQAQYDLAQQRVATAGLGDKINILLTD-YRELEGQYDKLVS----- 273

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +   V              G   Y T     +R L  +G+  +
Sbjct: 274 -----IEMIEAV--------------GYQFYDTYFAQCARLLKPEGMMLL 304


>gi|315498659|ref|YP_004087463.1| methyltransferase small [Asticcacaulis excentricus CB 48]
 gi|315416671|gb|ADU13312.1| methyltransferase small [Asticcacaulis excentricus CB 48]
          Length = 334

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 27/171 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           WR     R  L    F+ RP       +D+     +  +         DLG G G +   
Sbjct: 154 WRTLDAPRPILDGR-FQSRPGLFAWDRIDAGSERLVAHLPALSG-HGADLGGGYGYLSDE 211

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +L+  P  +    +   +A+E+A+ N    G  ER      D    ++G +D IVSNPP+
Sbjct: 212 VLRRYPEVRLDLYEAEQRAVELAELNLKAYG--ERIACRWHDVTKGIDGPYDFIVSNPPF 269

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                            P++       G +  R      +  L   G   +
Sbjct: 270 HAGRADQ----------PKL-------GQAFIR----SAAAALKPGGSLYM 299


>gi|289826386|ref|ZP_06545498.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
          Length = 179

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|222086425|ref|YP_002544959.1| ribosomal protein L11 methyltransferase [Agrobacterium radiobacter
           K84]
 gi|254782823|sp|B9JH32|PRMA_AGRRK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|221723873|gb|ACM27029.1| ribosomal protein L11 methyltransferase [Agrobacterium radiobacter
           K84]
          Length = 292

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 41/173 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + + + K       +  DI   A+ +A+ N   NG
Sbjct: 140 LETIETVLASRRVRNALDLGTGSGVLAIGVRKLR-NIPVLATDIDPIAVRVARENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++       +  F S      G FD+I++N                              
Sbjct: 199 IASGIALETAPGFHSTAFSRHGPFDLIIAN------------------------------ 228

Query: 202 GLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                R +     +   HL   G   +  I   Q+  V+  +   K+  V   
Sbjct: 229 --ILARPLIKMAPQLVAHLAPGGSVILSGILAEQRWKVLAAYNGAKMRHVRTI 279


>gi|206561759|ref|YP_002232524.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           J2315]
 gi|226710058|sp|B4E5V2|PRMA_BURCJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|198037801|emb|CAR53745.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           J2315]
          Length = 300

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 29/184 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWR-- 58
           + A  +    L   T      +   P  V+ + +            + E I   +G R  
Sbjct: 67  LSADHEPAVLLAAATN--EIGLAETPQFVVREVEEQDWVRLTQ--SQFEPIP--IGERIW 120

Query: 59  --DFYNVRLTLSSDTFEPRP---------ETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
               ++      +   E  P          T  L    L  S+     +    +LD G G
Sbjct: 121 VVPSWHDAPDPDALVLELDPGLAFGTGSHPTTRLCMEWLEQSV-----KPGQSVLDYGCG 175

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           +G + + L K+      +G+DI  +A+E A+ N+  N    R +       +  +G FD+
Sbjct: 176 SGILAI-LAKKCGANPVIGIDIDPQAVESARQNSERN----RAEVTYGLPDACPDGEFDI 230

Query: 168 IVSN 171
           +V+N
Sbjct: 231 VVAN 234


>gi|300113549|ref|YP_003760124.1| methyltransferase type 11 [Nitrosococcus watsonii C-113]
 gi|299539486|gb|ADJ27803.1| Methyltransferase type 11 [Nitrosococcus watsonii C-113]
          Length = 231

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 47/144 (32%), Gaps = 27/144 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      +  +   +  RILDL  GTG   LA+    P  + VGV++  + LEIA+   
Sbjct: 33  IDRLWKRRMVNLMPPNPSRILDLACGTGISTLAIASRYPNCQVVGVELREEYLEIARQKI 92

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G+      L        +  FD +  N  Y+                          
Sbjct: 93  QKLGLKNIELVLSRAEDYHSKEPFDCV--NSSYLAK------------------------ 126

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +  R +       L + GL  +
Sbjct: 127 -YAELRVLTHSTKTMLKEGGLLLM 149


>gi|261879547|ref|ZP_06005974.1| ribosomal protein L11 methyltransferase [Prevotella bergensis DSM
           17361]
 gi|270333773|gb|EFA44559.1| ribosomal protein L11 methyltransferase [Prevotella bergensis DSM
           17361]
          Length = 288

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD G G+G + + +  +      +G DI   +++ A+ NA  N VS   + +  D
Sbjct: 149 QGKRVLDCGCGSGILGI-VASKFGAKSVIGYDIDEWSVDNARHNAEQNRVS-NLEVIHGD 206

Query: 157 --WFSSVEGLFDVIVSN 171
                 VEGLFDV+++N
Sbjct: 207 ASVLDHVEGLFDVVLAN 223


>gi|115374327|ref|ZP_01461611.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368637|gb|EAU67588.1| ribosomal protein L11 methyltransferase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 247

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 33/160 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA     +       +LD+GTGTG + +A  K+    + VG D    ++E+A  NA  N 
Sbjct: 104 LAAIDTYMASHPGASVLDVGTGTGVLAIA-AKKLGAGRVVGTDNDPTSVELAHENAAVND 162

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             +    L       V G FD++V+N   + + ++    L                    
Sbjct: 163 TPDVE--LSGKGLEQVPGTFDLVVAN--ILANTLIALAPL-------------------- 198

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
              IA  V   L   G+ +      QK +V   + ++ L 
Sbjct: 199 ---IAPKVKERLVLAGVLA-----PQKAEVEAAYRAQGLT 230


>gi|17227508|ref|NP_484056.1| hypothetical protein all0012 [Nostoc sp. PCC 7120]
 gi|17134990|dbj|BAB77536.1| all0012 [Nostoc sp. PCC 7120]
          Length = 399

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 29/141 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   R   +  +RILD G G+G     L+  +P  + VG+D+S   L +AK     
Sbjct: 41  AAHSFCTGRKPAKQDIRILDAGCGSGVGTEYLVHLNPQAQVVGIDLSAGTLAVAKVRCQR 100

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G + R +      +    + G FD+I                + V    P         
Sbjct: 101 SG-ANRVEFHHLSLYDVEQLPGEFDLINC--------------VGVLHHLP--------- 136

Query: 202 GLSHYRTIADGVSRHLNKDGL 222
                R I     + L   GL
Sbjct: 137 --DPIRGIQALAKK-LAPGGL 154


>gi|266624563|ref|ZP_06117498.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium hathewayi
           DSM 13479]
 gi|288863579|gb|EFC95877.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium hathewayi
           DSM 13479]
          Length = 463

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     ++  +S  +F    +T  L  +     +   +     + + DL +GT
Sbjct: 269 LYGQDYFYEELLGLKFRISPFSFF---QTNSLGAEVLYEKARSYVGDTKDMVVFDLYSGT 325

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   +    P  K  VGV+I  +A+E AK NA  NG+ E  + +  D       +E  
Sbjct: 326 GTIAQMIA---PVAKKVVGVEIVEEAVEAAKENAKMNGL-ENCEFIAGDVLKVIDEIEEK 381

Query: 165 FDVIVSNPP 173
            D+I+ +PP
Sbjct: 382 PDLIILDPP 390


>gi|223040269|ref|ZP_03610546.1| ribosomal protein L11 methyltransferase [Campylobacter rectus
           RM3267]
 gi|222878428|gb|EEF13532.1| ribosomal protein L11 methyltransferase [Campylobacter rectus
           RM3267]
          Length = 276

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 17/121 (14%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKRDV------------VRILDLGTGTGA 110
           +  +     EP+     +++D ALAF     E                +  LD+G G+G 
Sbjct: 98  KFYIHPSWEEPKSGFENIIIDPALAFGSGHHESTSACIEYLQKYAASGMSALDVGCGSGI 157

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +AL K          D   +A++ ++ NA  NGV  +F+ + +   ++++  +DV+V+
Sbjct: 158 LSIALAKL--GCVTDACDTDEQAVQSSQKNAELNGV--KFNQIWTGSVANLDKKYDVVVA 213

Query: 171 N 171
           N
Sbjct: 214 N 214


>gi|193699922|ref|XP_001950974.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog A-like
           [Acyrthosiphon pisum]
          Length = 645

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 12/127 (9%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+      N+ L +S  T+  R  + L  +          +  +   +LDL  G+G + 
Sbjct: 343 YIV--EKLLNLSLEISPATY-FRLNS-LGAEELCKVVADLADVNENTTVLDLFCGSGCLA 398

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFD 166
           L L K+    + VG+++    +  AK NA  NG+        R + +     + ++G   
Sbjct: 399 LTLAKKCK--QVVGIELIKANIMDAKRNAEINGIVNCEFIAGRTEDILDSVLNKLKGCNV 456

Query: 167 VIVSNPP 173
            ++ +PP
Sbjct: 457 TVIMDPP 463


>gi|288802228|ref|ZP_06407668.1| ribosomal protein L11 methyltransferase [Prevotella melaninogenica
           D18]
 gi|288335195|gb|EFC73630.1| ribosomal protein L11 methyltransferase [Prevotella melaninogenica
           D18]
          Length = 289

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LD G GTG + + +  +    + V  DI   ++  A+ NA  NGV    D L+ D   
Sbjct: 155 RVLDCGCGTGILGI-VAAKCGAKEVVSYDIDEWSVRNAEHNAELNGVE--LDVLEGDRRV 211

Query: 158 FSSVEGLFDVIVSN 171
            S V G+FDVI++N
Sbjct: 212 LSHVSGVFDVILAN 225


>gi|228985613|ref|ZP_04145767.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229156106|ref|ZP_04284205.1| Methyltransferase type 11 [Bacillus cereus ATCC 4342]
 gi|228627427|gb|EEK84155.1| Methyltransferase type 11 [Bacillus cereus ATCC 4342]
 gi|228774190|gb|EEM22602.1| Methyltransferase type 11 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 175

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 45/180 (25%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDT 152
           +ILD+GTG+G++ + L K  P     G        + S       + NA   G   R + 
Sbjct: 8   KILDIGTGSGSLIIKLAKTFPKSFLTGIDYWGGNWEYSK---AQCQQNAEIEGGYNRINF 64

Query: 153 LQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           +++        +  FDVIVS   +           EV+D + ++              + 
Sbjct: 65  IKASASKIPFNDEEFDVIVSCLTF----------HEVKDAENKM-------------EVI 101

Query: 211 DGVSRHLNKDGLCSV------EIGYNQKVDVVRIFESRKLFLVNAFKDYG---GNDRVLL 261
               R L   G          E  + +K +++ I +   +  VN +K         R+LL
Sbjct: 102 KEALRVLKPGGEFVFLDLFMDEKMFGEKKELLNILKEYDVSEVNGYK-LAEEMKIPRILL 160


>gi|218710862|ref|YP_002418483.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32]
 gi|254783323|sp|B7VM52|PRMA_VIBSL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|218323881|emb|CAV20242.1| ribosomal protein L11 methyltransferase [Vibrio splendidus LGP32]
          Length = 295

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A   +    K VG+DI  +AL  +K NA  NGV+E+ +          EGL  
Sbjct: 169 GSGILAIA-AIKLGAAKVVGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|34558209|ref|NP_908024.1| SAM dependent methyltransferase [Wolinella succinogenes DSM 1740]
 gi|34483928|emb|CAE10924.1| conserved hypothetical protein-SAM dependent methyltransferases
           [Wolinella succinogenes]
          Length = 233

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 27/181 (14%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            F+LP I++R   R L++G+G+G + L   ++    + V V+   +    ++ NA  N +
Sbjct: 21  HFALPLIKERS--RALEIGSGSGILGLLCARDR-GLELVMVEREREMAIYSEQNARINAI 77

Query: 147 SERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVR--DFDPRISLDGGID 201
             +   ++ D+ S   G    FD+ +SNPP+    ++      +    ++  + L     
Sbjct: 78  EAKV--MERDFLSLQIGELAPFDLALSNPPFYHRNVLKSQNPSILAARYEENLPL----- 130

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRV 259
                +     + R L   G         Q   V    + +      V        + R+
Sbjct: 131 -----KECLLQLKRFLKPRGSFIFCFDAKQSDRVFFELKEKGFNPETVRFV-----HPRI 180

Query: 260 L 260
            
Sbjct: 181 T 181


>gi|307720668|ref|YP_003891808.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
 gi|306978761|gb|ADN08796.1| methyltransferase small [Sulfurimonas autotrophica DSM 16294]
          Length = 231

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 11/155 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++LD+G G G V L + +++   +   V+     +   K+NA  N +S +    + 
Sbjct: 27  HPKGKVLDVGAGCGIVGLLVARDNKKVELEAVEKQEAFIHFCKTNARVNNISYK--LYEC 84

Query: 156 DWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D+    E   +D I+SNPP+  + +       + +    ++L      L         VS
Sbjct: 85  DFLELTEKNKYDYIISNPPFYPAGVQKSQNEMLFNARYNVNL-----PLD---KFFQKVS 136

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           R L             Q   V    +  K+ +V+ 
Sbjct: 137 RLLRPQSHFIFCYDATQFGLVCAELDKVKMKIVDV 171


>gi|260770654|ref|ZP_05879585.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP
           102972]
 gi|260614380|gb|EEX39568.1| ribosomal protein L11 methyltransferase [Vibrio furnissii CIP
           102972]
          Length = 295

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 54/254 (21%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           AL D+ +    V        ++  D      Q                +         + 
Sbjct: 59  ALYDAEADTSWVLSQIRASHLLADDFAYKVEQIEDKDWEREWMDNFHPMQ--------FG 110

Query: 63  VRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGTGT 108
            RL +       P P+   +++D  LAF           L  ++  D     ++D G G+
Sbjct: 111 KRLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLEWLDSLDLSGKTVIDFGCGS 170

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G + +A   +    K +G+DI  +AL  +K NA  NGV +  +                 
Sbjct: 171 GILAIA-AIKLGAAKVIGIDIDPQALLASKDNASRNGVEDLIEV---------------- 213

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EI 227
                Y+     + L  +V   +       G       R ++  +   +  +GL ++  +
Sbjct: 214 -----YLPKDQPEGLVADVVVANIL----AGP-----LRELSPVIKSLMKPNGLLAMSGV 259

Query: 228 GYNQKVDVVRIFES 241
              Q  DV   +  
Sbjct: 260 LNTQAEDVANYYRD 273


>gi|227824117|ref|YP_002828090.1| cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium fredii
           NGR234]
 gi|227343119|gb|ACP27337.1| cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium fredii
           NGR234]
          Length = 438

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 24/179 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSA----LAFSLPRIEKRDVVRILD 103
           H  LG   +   +L L  +        R   E L ++A    L     ++  +  +++LD
Sbjct: 149 HYDLGNAFY---KLFLDENMLYSCAYFREPDETL-EAAQRNKLRLLAAKLCLKPGMKVLD 204

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G + L L       + +GV +S +   +A   A   G+++R      D +  VEG
Sbjct: 205 IGCGWGDLALYLA-ALENVEVLGVTLSKEQQALASERARAAGMADRVRFELKD-YRDVEG 262

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            FD IVS    +       +      F+   +L    DGL+   +I      H++  G+
Sbjct: 263 PFDRIVS----VGMFEHVGVHHYDEFFNKLNALMR-DDGLAVLHSI-----GHMSPPGM 311


>gi|148259237|ref|YP_001233364.1| ribosomal L11 methyltransferase [Acidiphilium cryptum JF-5]
 gi|146400918|gb|ABQ29445.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Acidiphilium cryptum JF-5]
          Length = 305

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 29/161 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           ++R   RILDLGTG+G + +   K       +  DI  +A+ +A +NA  NGV+     +
Sbjct: 151 KRRAPGRILDLGTGSGILAITAAKIWGKP-VLATDIDQRAVRVASANAALNGVAPLLRVI 209

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            SD +S+            P +       L        P ++             +A  +
Sbjct: 210 GSDGWSA------------PMLARRAPYDLVFANILARPLVA-------------MAHEL 244

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           S HL   G   +   +G  Q   V+       L L     D
Sbjct: 245 SAHLAPGGTAILAGLLG-RQARWVMSAHRRHGLVLKGRIDD 284


>gi|322825679|gb|EFZ30569.1| proliferator-activated receptor-interacting protein interacting
           protein, putative [Trypanosoma cruzi]
          Length = 250

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
           +LDL  G G   + L +     K V VDI   A+E AK N    GV +R      D+   
Sbjct: 64  VLDLFCGCGGDTVQLARVYE--KVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDFRTL 121

Query: 158 -FSSVEGLFDVIVSNPPY 174
              ++E  FD +  +PP+
Sbjct: 122 KLDNME--FDAVHCSPPW 137


>gi|300727618|ref|ZP_07061007.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14]
 gi|299775138|gb|EFI71741.1| ribosomal protein L11 methyltransferase [Prevotella bryantii B14]
          Length = 273

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           RILD G GTG + LA   +      VG DI   ++E AK NA  NGV    +    D   
Sbjct: 139 RILDCGCGTGILGLA-ASKLGAKDIVGYDIDEWSVENAKHNAEINGVK-NMEIYHGDANV 196

Query: 158 FSSVEGLFDVIVSN 171
            + + G+FD++++N
Sbjct: 197 LNHISGIFDIVLAN 210


>gi|11497821|ref|NP_069043.1| hypothetical protein AF0205 [Archaeoglobus fulgidus DSM 4304]
 gi|2650438|gb|AAB91027.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 204

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D+  I+DLG GTG + +A      +   VGVD+  +AL+IA+ NA   GV    D ++
Sbjct: 43  NGDLDLIIDLGCGTGILAIACSLLGHYS--VGVDLDVEALKIARDNAAELGVEA--DFVR 98

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           S+            V NPP+            ++ F+
Sbjct: 99  SEVSKFRCKRKVTTVMNPPFGIQRKHADRPFLLKAFE 135


>gi|323495910|ref|ZP_08100978.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
 gi|323319126|gb|EGA72069.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
          Length = 340

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD G G G +   +   +P  +    DIS  A+  +++    N ++ R     SD +S
Sbjct: 203 KVLDFGCGAGVIGSVMATLNPEIELEMCDISALAVASSQATLEANQLTGRVFA--SDVYS 260

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLE 186
                +  I+SNPP+   +       E
Sbjct: 261 DTGSDYRFIISNPPFHAGLDTSYSATE 287


>gi|292559370|gb|ADE32371.1| Ribosomal protein L11 methyltransferase [Streptococcus suis GZ1]
          Length = 315

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 180 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDEVAVRVAQENIDLNANTSNIHVAAG 238

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    ++   +VIV+N                      ++             + +   R
Sbjct: 239 DLLRGIDIKAEVIVAN---------------------ILA--------DILIHLTEDAYR 269

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    E+   FL
Sbjct: 270 LVKDEGYLIMSGIIADKWDMVRASAEAAGFFL 301


>gi|197265329|ref|ZP_03165403.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205357649|ref|ZP_02572037.2| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|197243584|gb|EDY26204.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205330610|gb|EDZ17374.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 193

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 18  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 77

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 78  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 109

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 110 --HLTALIDWAMGHLHPGGRLVM 130


>gi|16760964|ref|NP_456581.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29141340|ref|NP_804682.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|213616136|ref|ZP_03371962.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213648657|ref|ZP_03378710.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|48428120|sp|Q8Z5M9|CBIT_SALTI RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|25356347|pir||AI0758 precorrin-8W decarboxylase (EC 1.-.-.-) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503262|emb|CAD02391.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136967|gb|AAO68531.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 192

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|331265875|ref|YP_004325505.1| ribosomal protein methyltransferase [Streptococcus oralis Uo5]
 gi|326682547|emb|CBZ00164.1| ribosomal protein methyltransferase [Streptococcus oralis Uo5]
          Length = 317

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 50/152 (32%), Gaps = 31/152 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGEIVLDVGTGSGVLSIA-SSLLGAKEIFAYDLDDVAVRVAQENIELNTGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VE   DVIV+N                      ++             + D   R
Sbjct: 229 DLLKGVEIEADVIVAN---------------------ILA--------DILIHLTDDAYR 259

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +  I  ++   V    ES   FL
Sbjct: 260 LVKDEGYLIMSGIIKDKWDMVRESAESAGFFL 291


>gi|320547794|ref|ZP_08042078.1| ribosomal protein L11 methyltransferase [Streptococcus equinus ATCC
           9812]
 gi|320447554|gb|EFW88313.1| ribosomal protein L11 methyltransferase [Streptococcus equinus ATCC
           9812]
          Length = 317

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIDLNANTENIHVAT 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    V+   DVIV+N                      ++             + +   
Sbjct: 228 GNLLQGVDIKADVIVAN---------------------ILA--------DILVNMTEDAY 258

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +  I  ++   V +  E    FL
Sbjct: 259 RLVKDEGYLIMSGIISDKWEMVRKSAEDAGFFL 291


>gi|241889500|ref|ZP_04776799.1| methyltransferase [Gemella haemolysans ATCC 10379]
 gi|241863807|gb|EER68190.1| methyltransferase [Gemella haemolysans ATCC 10379]
          Length = 244

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 22/181 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           DS L      + +     I++L +G G + + +L+E    K   ++I    +E++K +  
Sbjct: 28  DSFLLPYFANVPRSFKKNIIELCSGNGGISI-ILREKSDAKIEMLEIQEDLVELSKKSLE 86

Query: 143 TNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIE----SVIVDCLGLEVRDFDPRI 194
            N ++        D  +  E      FD ++ NPPY          +     +   +   
Sbjct: 87  LNEIT-NVAVRSGDIKNVKEYYKPSTFDYVICNPPYFPVENMPNQREKFNHNISRHELLC 145

Query: 195 SLDGGIDGLSHYRTIADGVSRHL-NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +L          + I     R+L  ++G  ++     +  D++   E   L +      Y
Sbjct: 146 NL------SDIIQAI-----RYLVKQNGKFALVHRTYRISDIISECEKNGLAIKRIRFVY 194

Query: 254 G 254
            
Sbjct: 195 S 195


>gi|225563441|gb|EEH11720.1| DUF890 domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 445

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 21/164 (12%)

Query: 57  WRDFYNVRLTLSSDTFEP----RPETELLVDSALA-FSLPRIEKRDVVRI---LDLGTGT 108
            RDF  + L L SD   P    R    L +   L   S    +  D  R    LD+GTG 
Sbjct: 35  KRDF-GLHLDLPSDRLCPPVPNRFNYILWLQDLLDSTSADYSDGYDQERDVFGLDIGTGA 93

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L    + P ++    DI  K L+ A+ N   N +  R   ++S   +++      
Sbjct: 94  SCIYPLLGCAQRPKWRFAATDIDAKNLKYARDNVQRNKLDSRIQIIESSTSNALIPLETI 153

Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                    D  + NPP+ +S        + +   P  +  G  
Sbjct: 154 NIPESNSRLDFTMCNPPFYQSRDELISSAKAKQRPPFSACTGAE 197


>gi|86610268|ref|YP_479030.1| hypothetical protein CYB_2847 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558810|gb|ABD03767.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 410

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 50/141 (35%), Gaps = 27/141 (19%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A AF       R  VRILD G G+G     +  ++P  +    D+S +ALEIA++    
Sbjct: 45  QAHAFCTGSHPGRRKVRILDAGCGSGVGTEYIAHQNPNAEIWAFDLSSRALEIAEARCRA 104

Query: 144 NGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +     +F  L       + G FD I                + V    P        D 
Sbjct: 105 SQAPPVQFRQLNVYDIDQLPGQFDFINC--------------VGVLHHLP--------DP 142

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
           L+  + +A      L   GL 
Sbjct: 143 LAGLQALAGK----LAPGGLL 159


>gi|325093401|gb|EGC46711.1| DUF890 domain-containing protein [Ajellomyces capsulatus H88]
          Length = 445

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 21/164 (12%)

Query: 57  WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRI-EKRDVVRI---LDLGTGT 108
            RDF  + L L SD   P    R    L +   L  +     +  D  R    LD+GTG 
Sbjct: 35  KRDF-GLHLDLPSDRLCPPVPNRFNYILWLQDLLDSTSANYSDGYDQERDIFGLDIGTGA 93

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L    + P ++    DI  K L+ A+ N   N +  R   ++S   +++      
Sbjct: 94  SCIYPLLGCAQRPKWRFAATDIDAKNLKYARDNVQRNKLDSRIQIIESSTSNALIPLEAI 153

Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                    D  + NPP+ +S        + +   P  +  G  
Sbjct: 154 NIPESNSRLDFTMCNPPFYQSRDELISSAKAKQRPPFSACTGAE 197


>gi|315282371|ref|ZP_07870796.1| ribosomal protein L11 methyltransferase [Listeria marthii FSL
           S4-120]
 gi|313613981|gb|EFR87700.1| ribosomal protein L11 methyltransferase [Listeria marthii FSL
           S4-120]
          Length = 314

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETEL------LVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  ET        +++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWETYEASANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 I+D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDDIIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENIQLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N   I + ++     +V                          
Sbjct: 231 NNLLQDINKTNVDIVVAN---ILAEVILLFPEDVY------------------------- 262

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 263 -AALKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|289422316|ref|ZP_06424166.1| RNA methyltransferase, RsmD family [Peptostreptococcus anaerobius
           653-L]
 gi|289157261|gb|EFD05876.1| RNA methyltransferase, RsmD family [Peptostreptococcus anaerobius
           653-L]
          Length = 186

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 36/176 (20%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             ++L    D ++ RP T+ + +S      P +       +LDL +G+GA+ +       
Sbjct: 9   RGLKLNTPED-YDIRPTTDRVKESMFNVISPYVYD---AEVLDLFSGSGALGIE-ALSRG 63

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPPY 174
                  D   K++ + KSN        R   +  D+  ++      +   D+I  +PPY
Sbjct: 64  ASHVYFCDKDPKSIGVTKSNISKTKFEARSTVILGDYLKAISNISSKKEKMDIIFIDPPY 123

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +                   L G        + I D     L +DG+  VE  Y 
Sbjct: 124 YKG------------------LFG-----EVLKEIVDQGI--LEEDGILVVEHDYQ 154


>gi|240276043|gb|EER39556.1| DUF890 domain-containing protein [Ajellomyces capsulatus H143]
          Length = 287

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 21/164 (12%)

Query: 57  WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRI-EKRDVVRI---LDLGTGT 108
            RDF  + L L SD   P    R    L +   L  +     +  D  R    LD+GTG 
Sbjct: 35  KRDF-GLHLDLPSDRLCPPVPNRFNYILWLQDLLDSTSANYSDGYDQERDIFGLDIGTGA 93

Query: 109 GAV-CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------ 161
             +  L    + P ++    DI  K L+ A+ N   N +  R   ++S   +++      
Sbjct: 94  SCIYPLLGCAQRPKWRFAATDIDAKNLKYARDNVQRNKLDSRIQIIESSTSNALIPLEAI 153

Query: 162 -----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                    D  + NPP+ +S        + +   P  +  G  
Sbjct: 154 NIPESNSRLDFTMCNPPFYQSRDELISSAKAKQRPPFSACTGAE 197


>gi|224372200|ref|YP_002606572.1| ribosomal protein L11 methyltransferase [Nautilia profundicola AmH]
 gi|223589094|gb|ACM92830.1| ribosomal protein L11 methyltransferase [Nautilia profundicola AmH]
          Length = 274

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 17/121 (14%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGA 110
              +    + P+ +   +L+D ALAF     E              +   +LD+G G+G 
Sbjct: 98  EFYIHPSWYPPKEDKINILIDPALAFGSGHHETTRSCVKAIKKYVNENDTLLDVGCGSGI 157

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +   K     K    D    A++ AK N   N  +  ++ +     ++ E  +DV+V+
Sbjct: 158 LGIVASKL--GAKVDACDTDSIAVDSAKENFELNNAT--YENIWHGSANNTEKKYDVVVA 213

Query: 171 N 171
           N
Sbjct: 214 N 214


>gi|204929154|ref|ZP_03220297.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204321698|gb|EDZ06897.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 192

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|170571310|ref|XP_001891678.1| hypothetical protein [Brugia malayi]
 gi|158603678|gb|EDP39514.1| conserved hypothetical protein [Brugia malayi]
          Length = 219

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           +  L ++ L  ++      D   + DLG G G + L    +     G+G++I  +A+ I 
Sbjct: 29  SVELAEAIL-NAVAEEGCMDGCTVADLGCGPGILLLG-AVKLGASYGLGIEIDEEAINIC 86

Query: 138 KSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPY 174
           ++N     +    D +  D     S+++ +FD ++ NPP+
Sbjct: 87  RNNIERCDLGNVVDVICLDVTKNISALKPIFDTVIMNPPF 126


>gi|326479462|gb|EGE03472.1| N(5)-glutamine methyltransferase MTQ2 [Trichophyton equinum CBS
           127.97]
          Length = 283

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         ++++GTG+G +   L        G      +G D++ KA    +     
Sbjct: 54  LPTSTTSPSPVVVEVGTGSGVILGFLAANCKAILGRSDILTIGTDVNRKACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                                NA      +    +  D  S +  G+ D+++ NPPY+ +
Sbjct: 114 AISDKYSEENFRAAPANKESTNAKVPKPVQPLAVIIGDLCSPLRPGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGL--------------EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +  L                E+  +   ++  GG  G+     + D +   LN + G+
Sbjct: 174 PELPRLPSSSEVTSSASGMSKFEMESYFLSLTYAGGEHGMEITDRLLDSIPHVLNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|229552378|ref|ZP_04441103.1| ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539748|ref|YP_003174247.1| ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus Lc
           705]
 gi|229314244|gb|EEN80217.1| ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151424|emb|CAR90396.1| Ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus Lc
           705]
          Length = 314

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 54/221 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       + +    + + P+   EL++               + L  SL     
Sbjct: 116 WKKYYHPLRVSRFLTIVPKWEHYTPQQPDELVLTLDPGMAFGTGTHPTTQLMLSLLESLV 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  +     + +  D+   A++ A++N   N VS       +
Sbjct: 176 RGGETMIDVGTGSGILAIA-AERLGVSQILATDVDEIAVKNAQANIALNPVSH-ITVKAN 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +    D+IV+N      ++ + L                         +   V  
Sbjct: 234 DLLQGLTVSADLIVAN------ILAEVLVP-----------------------LIPQVPS 264

Query: 216 HLNKDGLCSVE-IGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            LN  G   +  I   +   + +  +     +    +D GG
Sbjct: 265 RLNPHGHFLLAGIIAEKADLIRQTLQDNGFTIAQ-RRDAGG 304


>gi|84516663|ref|ZP_01004022.1| ribosomal protein L11 methyltransferase, putative [Loktanella
           vestfoldensis SKA53]
 gi|84509699|gb|EAQ06157.1| ribosomal protein L11 methyltransferase, putative [Loktanella
           vestfoldensis SKA53]
          Length = 287

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 66/196 (33%), Gaps = 58/196 (29%)

Query: 73  EPRPETELLVDSALAFSLPRIE---------------KRDVVRILDLGTGTGAVCLALLK 117
            P+    LL+++A+AF                          RILDLG GT  + +A  K
Sbjct: 100 VPQDSIPLLIEAAMAFGTGHHGTTLGCLLAFEQVLDLGFTGGRILDLGCGTAVLAMAAAK 159

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF----SSVEGLFDVIVSNPP 173
                  +  DI   A+++A++N   N +  + D L +  F      + G FD+I +N  
Sbjct: 160 VLGGP-VLASDIDPVAIDVARANVTANALDGQVDCLVAAGFGGGDPRMTGPFDLIFAN-- 216

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-----EIG 228
            I    +  L  E                          +S ++   G   +     E  
Sbjct: 217 -ILKGPLISLAPE--------------------------ISGNMQPGGYLILSGLLNE-- 247

Query: 229 YNQKVDVVRIFESRKL 244
             Q  +V+  + S   
Sbjct: 248 --QADEVIHTYASNGF 261


>gi|319745948|gb|EFV98231.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           ATCC 13813]
          Length = 317

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 48/155 (30%), Gaps = 37/155 (23%)

Query: 96  RDVVRILDLGTGTGAVCL--ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           R    ++D+GTG+G + +  +LL           D+   A+ +A+ N   N  ++     
Sbjct: 170 RGGETVIDVGTGSGVLSIVSSLLGAK---DIYAFDLDDVAVRVAQENIDMNPGTDNIHVA 226

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D    VE   DVIV+N                      ++             + D  
Sbjct: 227 AGDLLKGVEQEADVIVAN---------------------ILA--------DILIHLTDDA 257

Query: 214 SRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            R +   G   +   I       V    E    FL
Sbjct: 258 YRLVRDGGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|317049792|ref|YP_004117440.1| 50S ribosomal protein L11 methyltransferase [Pantoea sp. At-9b]
 gi|316951409|gb|ADU70884.1| ribosomal protein L11 methyltransferase [Pantoea sp. At-9b]
          Length = 293

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 30/146 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGV++R       
Sbjct: 158 QGKTVIDFGCGSGILAIA-ALKLGAAQAIGIDIDPQAIQASRDNAERNGVADRLALYLPH 216

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                    DV+V+N           L   +R+  P IS             +      H
Sbjct: 217 Q-QPENLQADVVVAN----------ILAGPLRELAPLIS-------------VLPKAGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +     +Q   V   +  R
Sbjct: 253 LGLSGVLA-----SQAESVCEAYTER 273


>gi|302874302|ref|YP_003842935.1| 50S ribosomal protein L11 methyltransferase [Clostridium
           cellulovorans 743B]
 gi|302577159|gb|ADL51171.1| ribosomal protein L11 methyltransferase [Clostridium cellulovorans
           743B]
          Length = 318

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 77/200 (38%), Gaps = 30/200 (15%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+   LV                    +  +E+   
Sbjct: 116 WKKYYKSTKVGARVVIKPQWEEYTPKAHELVVELDPGMAFGTGTHETTRMCIQALERYVD 175

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + D+GTG+G + +A  K       +G D+   A++ A  N   N +         D
Sbjct: 176 EGKTVFDIGTGSGILAIAAAKLGSKS-VIGGDLDPVAVDSANMNIGLNNLGNNIRIFHGD 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGLSHYRTIADGVSR 215
               V G  DV+V+N   I + ++  L  ++RD+     +DGG        +   D V +
Sbjct: 235 LMQGVAGRADVVVAN---IIADVIMFLTPQLRDYI----VDGGYFISSGIIKDRKDEVVK 287

Query: 216 HLNKDGLCSVEIGYNQKVDV 235
            L K+G   +E+  NQ   +
Sbjct: 288 TLIKNGFEPMEVN-NQGEWI 306


>gi|224418719|ref|ZP_03656725.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
           MIT 98-5491]
 gi|253826751|ref|ZP_04869636.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
           MIT 98-5491]
 gi|313142238|ref|ZP_07804431.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
           MIT 98-5491]
 gi|253510157|gb|EES88816.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
           MIT 98-5491]
 gi|313131269|gb|EFR48886.1| ribosomal protein L11 methyltransferase [Helicobacter canadensis
           MIT 98-5491]
          Length = 275

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 16/122 (13%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEKR------------DVVRILDLGTGTGA 110
           +  +    F P+ +   L+++ ALAF                        +LD+G G+G 
Sbjct: 96  KYYIYPPWFSPKTDKINLIIEPALAFGSGHHGSTFGCLEALNNLSLANKTLLDVGCGSGI 155

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIV 169
             L++  +    +    D    A+   K NA  N ++ ++      D  +  +  FDV++
Sbjct: 156 --LSIAAKKSGAEVWCCDTDEIAVNATKENAQKNNLNLDKVFLGSIDKITDKKDYFDVVI 213

Query: 170 SN 171
           +N
Sbjct: 214 AN 215


>gi|222529209|ref|YP_002573091.1| hypothetical protein Athe_1218 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456056|gb|ACM60318.1| protein of unknown function Met10 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 389

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD    TG   +   K     K +GVDIS  A+E A  NA  N V  + + + ++ F  
Sbjct: 218 ILDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNEVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ +PP      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDPPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|163803827|ref|ZP_02197677.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4]
 gi|159172370|gb|EDP57247.1| ribosomal protein L11 methyltransferase [Vibrio sp. AND4]
          Length = 295

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E +D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESKDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL+ ++ NA  NGV+++ +       +  EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALQASRDNAERNGVADQLEVYLPQ--NQPEGLLA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|315038586|ref|YP_004032154.1| hypothetical protein LA2_07180 [Lactobacillus amylovorus GRL 1112]
 gi|312276719|gb|ADQ59359.1| hypothetical protein LA2_07180 [Lactobacillus amylovorus GRL 1112]
          Length = 343

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 17/170 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G  A  + +      
Sbjct: 17  SLRIIQDKTAFSFSMDTLLLAYWAKGLI------RDRDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    + +  ++ +      +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEIYSQAVRSVELNDMENRISVYRDNVLNAPKFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  + +    R  L      L     I    S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHEL------LIDLEHIIAVASGLLKMKGKMFMVH 173


>gi|309792423|ref|ZP_07686889.1| putative RNA methylase [Oscillochloris trichoides DG6]
 gi|308225533|gb|EFO79295.1| putative RNA methylase [Oscillochloris trichoides DG6]
          Length = 352

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 78/218 (35%), Gaps = 38/218 (17%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-----DVVRILDLGTGTGAVCLAL 115
           + + + L+      RP      + AL  ++     R        R L++G G+G++ +  
Sbjct: 158 WELLVRLAPRPLATRPWRVCNREGALNGAVAHAMARLSLPDPTDRFLNIGCGSGSLLIER 217

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPP 173
           L   P  + +G DI   AL  +K+N    G+SER   +   +          D IV++ P
Sbjct: 218 LLIGPTRRAIGCDIDPAALRCSKANVEAAGLSERCQLELWDACQLPLHNASMDAIVADLP 277

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSV---EIGY 229
           +                     L G   + L  Y  + D  +R         +   E+  
Sbjct: 278 FGH-------------------LVGSHRENLELYPALLDEAARVARPGAHFVLLSHEV-- 316

Query: 230 NQKVDVVRIFESRKLFLVN--AFKDYGG-NDRVLLFCR 264
                + R+   R  + ++     + GG + R+ +  R
Sbjct: 317 ---RLMERLLAQRNTWNLHSLVRINLGGLHPRIFVLER 351


>gi|16765360|ref|NP_460975.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|56413066|ref|YP_150141.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|62180608|ref|YP_217025.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|167553179|ref|ZP_02346929.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168229342|ref|ZP_02654400.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168238764|ref|ZP_02663822.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168259675|ref|ZP_02681648.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168466321|ref|ZP_02700191.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194446414|ref|YP_002041297.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194472482|ref|ZP_03078466.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736213|ref|YP_002115063.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197247692|ref|YP_002146987.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197361990|ref|YP_002141627.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198243672|ref|YP_002216115.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|200389165|ref|ZP_03215777.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205353178|ref|YP_002226979.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|207857465|ref|YP_002244116.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224583475|ref|YP_002637273.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|543957|sp|Q05632|CBIT_SALTY RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|154425|gb|AAA27257.1| precorrin decarbocylase [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16420559|gb|AAL20934.1| synthesis of vitamin B12 adenosyl cobalamide precursor [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56127323|gb|AAV76829.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62128241|gb|AAX65944.1| synthesis of vitamin B12 adenosyl cobalamide precursor [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|194405077|gb|ACF65299.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194458846|gb|EDX47685.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711715|gb|ACF90936.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631345|gb|EDX49905.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197093467|emb|CAR58927.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197211395|gb|ACH48792.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288436|gb|EDY27817.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197938188|gb|ACH75521.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199606263|gb|EDZ04808.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205272959|emb|CAR37901.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322310|gb|EDZ10149.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205335882|gb|EDZ22646.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205351100|gb|EDZ37731.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206709268|emb|CAR33608.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224468002|gb|ACN45832.1| precorrin-8w decarboxylase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247245|emb|CBG25069.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994078|gb|ACY88963.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301158591|emb|CBW18102.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913021|dbj|BAJ36995.1| cobalt-precorrin-6Y C15-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321224675|gb|EFX49738.1| Cobalt-precorrin-6y C15-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322613705|gb|EFY10645.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620275|gb|EFY17144.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322623321|gb|EFY20162.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322630526|gb|EFY27295.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632797|gb|EFY29542.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322638870|gb|EFY35564.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640364|gb|EFY37022.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322647185|gb|EFY43684.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649011|gb|EFY45454.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322661025|gb|EFY57254.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663034|gb|EFY59241.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322668479|gb|EFY64634.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673385|gb|EFY69488.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322679172|gb|EFY75226.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322683266|gb|EFY79281.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322685864|gb|EFY81854.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715080|gb|EFZ06651.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323130353|gb|ADX17783.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|323195150|gb|EFZ80331.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323198718|gb|EFZ83818.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204217|gb|EFZ89227.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323209253|gb|EFZ94189.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323216090|gb|EGA00820.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323220185|gb|EGA04644.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323223695|gb|EGA08002.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231301|gb|EGA15415.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323232607|gb|EGA16704.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240950|gb|EGA24990.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323245631|gb|EGA29626.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246767|gb|EGA30738.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251103|gb|EGA34977.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323254872|gb|EGA38667.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323260937|gb|EGA44535.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266286|gb|EGA49775.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271430|gb|EGA54852.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326623861|gb|EGE30206.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628264|gb|EGE34607.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
 gi|332988965|gb|AEF07948.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 192

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|332305937|ref|YP_004433788.1| Methyltransferase type 12 [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173266|gb|AEE22520.1| Methyltransferase type 12 [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 417

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 19/170 (11%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            +   +       RILD+G   G   L L +  P  + + VD++  +L  A + A + G+
Sbjct: 190 NWLKTQHPDFSPKRILDIGCTVGHNALPLAQHFPDAQVIAVDVARPSLRYAHARAASLGI 249

Query: 147 SERFDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-- 201
            E    +Q++        +G FD+I ++  ++  +    L   ++     ++ DGG++  
Sbjct: 250 -ENIQFVQANAEELSQYDDGSFDLITTS-MFLHELSHQSLPKILKTIHRLLA-DGGLNLH 306

Query: 202 -------GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                  G+  Y+        + N +       G   ++D+ ++F     
Sbjct: 307 LEQPQYVGMDVYQQFIRDWDTYFNNEPYW----GPMHELDLAKVFAECGF 352


>gi|329941771|ref|ZP_08291036.1| Ribosomal RNA small subunit methyltransferase C [Streptomyces
           griseoaurantiacus M045]
 gi|329299488|gb|EGG43388.1| Ribosomal RNA small subunit methyltransferase C [Streptomyces
           griseoaurantiacus M045]
          Length = 397

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 26/137 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA----KSNAVTNGVSER 149
             R   R++DLG G G V  A+    P    + VD S +A+  A    + N         
Sbjct: 246 RARAGQRVVDLGCGNGIVGTAVALAEPGADVLFVDESYQAVASAEETYRENTAGADRPGG 305

Query: 150 FDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + L  D  + +  G  D++++NPP+                             +  R 
Sbjct: 306 AEFLVGDGLAELAPGGVDLVLNNPPFHSHQATTD---------------------ATARR 344

Query: 209 IADGVSRHLNKDGLCSV 225
           +     R L   G   V
Sbjct: 345 MFTQARRALRPGGELWV 361


>gi|328882941|emb|CCA56180.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           venezuelae ATCC 10712]
          Length = 433

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 70/189 (37%), Gaps = 33/189 (17%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL---TLSSDTFEPRPETELLVDSA----LAFSLPRIEK 95
            R  +  S H  +G  DFY + L    + S  + P    E  ++ A    L     ++  
Sbjct: 140 RRDKQAISHHYDVGN-DFYELVLGPSMVYSCAYWPSDGPEATLEEAQHDKLDLIARKLNL 198

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+LD+G G G++ L   +     + VG+ +S +    A+      G+++R +    
Sbjct: 199 KEGDRLLDVGCGWGSMALHAARAY-GARVVGITLSREQAAYARKRIAEEGLTDRIEIRVQ 257

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D+    +G +D I S       + +      VR                 YR  AD +  
Sbjct: 258 DYRDVTDGPYDAISS-------IGMAEHVGAVR-----------------YREYADILYG 293

Query: 216 HLNKDGLCS 224
            L   G   
Sbjct: 294 LLRPGGRLL 302


>gi|168242095|ref|ZP_02667027.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194450657|ref|YP_002046078.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194408961|gb|ACF69180.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205338595|gb|EDZ25359.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 192

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|124022185|ref|YP_001016492.1| methyltransferase [Prochlorococcus marinus str. MIT 9303]
 gi|123962471|gb|ABM77227.1| possible methyltransferase [Prochlorococcus marinus str. MIT 9303]
          Length = 407

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           +    + ++ILD G GTG     L   +P  + + VDIS  ALE+A+     +G +++  
Sbjct: 57  KCAGSEPLKILDAGCGTGVSTDYLAHLNPGAEILAVDISRGALEVARERLQRSGGNDQAH 116

Query: 152 TL---QSDWFSSVEGLFDVIVS 170
                QS      EG FD I S
Sbjct: 117 VRIENQSLLELEDEGQFDYINS 138


>gi|313126501|ref|YP_004036771.1| methyltransferase [Halogeometricum borinquense DSM 11551]
 gi|312292866|gb|ADQ67326.1| methyltransferase [Halogeometricum borinquense DSM 11551]
          Length = 207

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++DLGTGTG + L      P  + VGVDI   AL+ A+ N +  G +     +++D
Sbjct: 48  EGKTVVDLGTGTGMLALGAALRGP-ARVVGVDIDADALDTARENRIRVGTTTPIHWVRAD 106

Query: 157 WFSSVEGL--FDVIVSNPPY 174
              +   +     ++ NPP+
Sbjct: 107 ATQAPLCIDEPTTVLMNPPF 126


>gi|167762093|ref|ZP_02434220.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC
           43183]
 gi|167700052|gb|EDS16631.1| hypothetical protein BACSTE_00443 [Bacteroides stercoris ATCC
           43183]
          Length = 241

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 36/153 (23%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R   + LV+           +R    I+D+ TGTG V +++ K+ P  + VG+D+S + L
Sbjct: 38  RLWRKRLVELV--------AERKPTNIVDIATGTGDVAISMAKKIPTSQIVGIDLSEEML 89

Query: 135 EIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           ++A+       +      L  D    S     FD+I              +   +R+F+ 
Sbjct: 90  KVAQQKIERFSIKPNIRLLCEDAENLSLSSNTFDII-------------TISFGIRNFEN 136

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +      +GLS    I       L + G   +
Sbjct: 137 IV------NGLSECHRI-------LKEGGSLFI 156


>gi|312884762|ref|ZP_07744463.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309367675|gb|EFP95226.1| ribosomal protein L11 methyltransferase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 295

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFSSVEGLF 165
           G+G + +A +K     + +G+DI  +AL  ++ NA  NGV+++ +     D   ++  L 
Sbjct: 169 GSGILAIAAIKLGAK-QVIGIDIDPQALLASQDNAQRNGVADKLEVYLPKDQPENL--LA 225

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           DV+V+N        +  +   +   +  +++ G +D
Sbjct: 226 DVVVANILAGPLRELSPIIKSLVKPEGHLAMSGVLD 261


>gi|296122426|ref|YP_003630204.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
 gi|296014766|gb|ADG68005.1| methyltransferase small [Planctomyces limnophilus DSM 3776]
          Length = 393

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 75/239 (31%), Gaps = 49/239 (20%)

Query: 9   SFLC----RVTGLSSHQVIVDPDSVLDDRQRFFLT-NAIVRSLKHESIHRILGWRDFYNV 63
             L          S  +++VD           +L     +R  +   +  I G   F   
Sbjct: 122 WLLAQLGSHALQ-SRMELLVDELMRQTQASGCWLRTEKGIRQAEGMPL--IDGL--FRGE 176

Query: 64  RLTLSSDTFEPRPETELL--VDSA----------LAFSLPRIEKRDVVRILDLGTGTGAV 111
                   F P  E  L+  VD               +  R  +     +LDL   +   
Sbjct: 177 T----PPAFIPVEEHGLVYHVDLVDGQKTGFYLDQRENRFRAAQFASGNMLDLCCYSAGF 232

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LF 165
            +  L+       +GVD S  A+E A +N   NG+++R++    D F  +         F
Sbjct: 233 GMNALRHGEVTHVIGVDTSKIAVENATANVTRNGLADRYEVRHGDAFEVLTEFRNQGVRF 292

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
             IV +PP +                 R ++D G+ G   Y ++       L   G   
Sbjct: 293 QTIVLDPPKLVKS--------------RSTMDSGLKG---YHSLNRLALDVLEPQGTLV 334


>gi|227824453|ref|ZP_03989285.1| methyltransferase [Acidaminococcus sp. D21]
 gi|226904952|gb|EEH90870.1| methyltransferase [Acidaminococcus sp. D21]
          Length = 242

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+    + P + K+    +L+LG GTGA+ L L         + VD +   +E+ K +  
Sbjct: 29  DAVFLAAFPHMVKKAC--VLELGCGTGAISL-LAANRGAQSVLAVDKNPHVIELLKRSVR 85

Query: 143 TNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            NG+ ++      D  +  E       D++  NPPY        L  E    +  ++L  
Sbjct: 86  ENGLEQQVMPFVGDILAYREYLKPDTMDLVYMNPPYRIGGRRRQLMTEA-CHEVGVTL-- 142

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          +  L   G  ++
Sbjct: 143 --------EDFIKAAAFALKTRGRLAM 161


>gi|119477503|ref|ZP_01617694.1| 16S ribosomal RNA m2G1207 methyltransferase [marine gamma
           proteobacterium HTCC2143]
 gi|119449429|gb|EAW30668.1| 16S ribosomal RNA m2G1207 methyltransferase [marine gamma
           proteobacterium HTCC2143]
          Length = 350

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 64/206 (31%), Gaps = 37/206 (17%)

Query: 60  FYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           F  +        F   +    ++LL+D        ++       ++DLG G G + + + 
Sbjct: 172 FAGINFITKPGIFGWNKIDQGSQLLIDQLADEV--KLMAHVPETVVDLGCGYGFISV-MA 228

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                   +  D +  A+     N   +GVS        D  + +E   D+++ NPP+ +
Sbjct: 229 SRIVNATFIASDNNMAAINACTENFRQHGVSGSVVV--DDCAADIELKADMVLCNPPFHQ 286

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
              V+                                 R LN+ G+    +        +
Sbjct: 287 GFEVED---------------------QLTEKFLRASGRLLNRKGVALFVVN-----RFI 320

Query: 237 RIFESRK--LFLVNAFKDYGGNDRVL 260
            +    K    LV    D  G  +V+
Sbjct: 321 PLERKAKKWFKLVETIAD-NGRFKVV 345


>gi|78049356|ref|YP_365531.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78037786|emb|CAJ25531.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 392

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 59/200 (29%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 209 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 266

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 267 VTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 326

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 327 DRP--------------------DIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDS 366

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L+ A +
Sbjct: 367 FGQVRVAAERDGFKLIAAIR 386


>gi|320168058|gb|EFW44957.1| methylase [Capsaspora owczarzaki ATCC 30864]
          Length = 235

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/190 (25%), Positives = 76/190 (40%), Gaps = 18/190 (9%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRD-------VVRI-LDLGTGTGAVC--LALLKE 118
              +EP  +T L++D+      PR +          V R+ L++G G+G V   LA +  
Sbjct: 24  EHVYEPAEDTFLMLDALQQDFGPRAQHNHDHDHAPLVPRVCLEIGPGSGIVTTFLAQMLG 83

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIE 176
                 + VDI+ +A E     A  NG  +  D L  D    +   GL DV+V NPPY+ 
Sbjct: 84  RANALCLAVDINTRAAEATAQTAQYNG-DQTVDVLVGDLTGGLRLAGLVDVLVFNPPYVV 142

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDV 235
           +   +      RD     +  GG+ G      +   V+  L+  G   +  I  N   ++
Sbjct: 143 TEDEEVTSS--RDI--SAAWAGGLRGRRVTDRLLPLVASILSPTGRFYLLTIDENDPAEI 198

Query: 236 VRIFESRKLF 245
             I     L 
Sbjct: 199 AAILARDGLH 208


>gi|225713178|gb|ACO12435.1| N6-adenine-specific DNA methyltransferase 1 [Lepeophtheirus
           salmonis]
          Length = 215

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 73/202 (36%), Gaps = 25/202 (12%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGV 127
           D +EP  ++ L++D  L   L  +  +     +++G+G+G +   +A    S        
Sbjct: 15  DVYEPAEDSYLMLD-VLEKQLKEL--KPPTICVEIGSGSGVLIGGVASALGSVNAAYFAT 71

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLG 184
           D+S  A          N  S   + L +D       ++G  D+++ NPPY+ +   +   
Sbjct: 72  DLSPLACIATVQ--TGNTSSVPLNVLCTDISFGLDRLKGSVDILLCNPPYVATPFEEITA 129

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK---DGLCSVEIGYNQKVDVVRIFES 241
              +D   + S  GG  G +    +       L+         +E    Q  DV  + E 
Sbjct: 130 --YKDALIKASWAGGPRGRNVTDKVIRLCKDLLSPVTGRAFIVLE----QCNDVDSVMEF 183

Query: 242 RKLFLVNAFKDY-----GGNDR 258
                V    D       G +R
Sbjct: 184 T-TEEVGLKADICGERKAGRER 204


>gi|168818284|ref|ZP_02830284.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|238913760|ref|ZP_04657597.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|205344949|gb|EDZ31713.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320086463|emb|CBY96234.1| precorrin-8W decarboxylase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 192

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|319427175|gb|ADV55249.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           putrefaciens 200]
          Length = 417

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+     G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEQEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +S++   L  D + ++ G +D +VS        +++ +G E         L G       
Sbjct: 238 LSDKITLLTED-YRNLTGEYDRVVS------IEMIEAVGHEY--------LAG------F 276

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           ++ +A      L  +G   +
Sbjct: 277 FKKLAS----LLKPNGRILL 292


>gi|114685143|ref|XP_514989.2| PREDICTED: HpaII tiny fragments locus 9C isoform 6 [Pan
           troglodytes]
          Length = 643

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 30/154 (19%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSTV 436

Query: 102 LDLGTGTGAVCLALLK---ESPFF-------------KGVGVDISCKALEIAKSNAVTNG 145
           LD+  GTG + LAL +    SP +             + +GV++  +A+E A+ NA  N 
Sbjct: 437 LDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVELCPEAVEDARVNAQDNE 496

Query: 146 VSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173
           +S       R + L     S +     V + +PP
Sbjct: 497 LSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPP 530


>gi|45259314|emb|CAE51172.1| RemG protein [Streptomyces resistomycificus]
          Length = 349

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 25/133 (18%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +    V R++DLG G+G   +AL    P  +   +D      ++A++N    G+ +R + 
Sbjct: 179 VPLAGVRRVVDLGCGSGDYSIALASHHPELRVTALD-YPAVTDLARANVREAGLEDRIEV 237

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +D  +                       L   +  + P  +             +   
Sbjct: 238 RPADIMADAW-------------PETDAVLLSHVLDGYGPERA-----------AHLVKR 273

Query: 213 VSRHLNKDGLCSV 225
           +  HL   G   V
Sbjct: 274 IHAHLPDGGRLLV 286


>gi|46116712|ref|XP_384374.1| hypothetical protein FG04198.1 [Gibberella zeae PH-1]
          Length = 449

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +        +    R    L +   L  S      +DVV  LD+GTG   +   L     
Sbjct: 74  HKSDFFNDPECVTNRHNYILWLKRLLDTSTYEKHAQDVVG-LDIGTGASCIYPLLGCTER 132

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSNPP 173
            +  +  DI  K+LE A+ NA  N + +R   +   W  ++              +SNPP
Sbjct: 133 NWNFIATDIDSKSLEYARKNATLNNLDQRIKIVDRKWTDNLIPLDELHIPRIAFTMSNPP 192

Query: 174 YIESVI 179
           + +S  
Sbjct: 193 FYKSEQ 198


>gi|329941137|ref|ZP_08290416.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           griseoaurantiacus M045]
 gi|329299668|gb|EGG43567.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           griseoaurantiacus M045]
          Length = 430

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 34/230 (14%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRD 59
           QALRD   F     GL +    + P +   +  R    +   R     +I  H  +G  D
Sbjct: 98  QALRDPE-FRAAARGLFALAGPLPPPAPPREEVRRARGHLHTRRADRRAISHHYDVGN-D 155

Query: 60  FYNVRL---TLSSDTFEPRPE-TELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           FY + L    + S  +   P+ T  L     L     ++  +   R+LD+G G G++ + 
Sbjct: 156 FYALVLGPSMVYSCAYWESPDSTLELAQRDKLELVSRKLALKPGERLLDVGCGWGSMAIH 215

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
             +E    + VG+ +S +    A+      G+++R +    D+    +G +D I S    
Sbjct: 216 AAREH-GVRVVGITLSQEQAAYARKRVADEGLTDRVEIRVQDYRDVDDGPYDAISS---- 270

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                   +   V              G   Y   A  +   L   G   
Sbjct: 271 ------IGMAEHV--------------GTQQYLRYAQELHSLLKPGGRLL 300


>gi|330465373|ref|YP_004403116.1| type 11 methyltransferase [Verrucosispora maris AB-18-032]
 gi|328808344|gb|AEB42516.1| methyltransferase type 11 [Verrucosispora maris AB-18-032]
          Length = 362

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              RI D+  GTG   +AL +  P  +  G+D+   AL  A+ NA   GV++R      D
Sbjct: 180 PGRRIADVACGTGWSSIALARAYPQAEVTGLDLDGAALRQAERNAAEAGVADRVRFACRD 239

Query: 157 WFSS-VEGLFDVIV 169
                + G +D++ 
Sbjct: 240 AADPQLAGEYDLVC 253


>gi|307565044|ref|ZP_07627557.1| ribosomal protein L11 methyltransferase [Prevotella amnii CRIS
           21A-A]
 gi|307346213|gb|EFN91537.1| ribosomal protein L11 methyltransferase [Prevotella amnii CRIS
           21A-A]
          Length = 289

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T+++V+  +  +L         R+LD G GTG + + +  +    +  G DI   +++ A
Sbjct: 138 TQMIVEKLIDLNL------KDKRVLDCGCGTGILGI-ISAKCGATEVFGYDIDEWSVKNA 190

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             NA  N V            S ++GLFD++++N
Sbjct: 191 IHNAEINDVKINVHKGDKKILSKIDGLFDLVLAN 224


>gi|209523574|ref|ZP_03272128.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209495979|gb|EDZ96280.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 220

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 28/146 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+ A A     +  +    +LD GTGT  + + + +  P ++ +G+D+S   L+I +SN 
Sbjct: 27  VNRAFAEQAIAVLPKSKGMVLDAGTGTARIPILIAQHKPGWQIIGIDLSENMLKIGESNI 86

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               VS + +    D      ++G FD+++SN       IV  LG               
Sbjct: 87  KAAAVSNQVELALVDAKKLPYIDGQFDLVISN------SIVHHLG--------------- 125

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D L         V R L   G   +
Sbjct: 126 -DPLPF----LCEVKRVLKPGGGIFL 146


>gi|198421513|ref|XP_002125257.1| PREDICTED: similar to Methyltransferase-like protein 5 [Ciona
           intestinalis]
          Length = 214

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 17/126 (13%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--AL 115
           + F   ++ L      P      L    L  +  +        + DLG G G + +  +L
Sbjct: 14  KPFQEPKIQLEQYVTTP-----HLAACLLHTAETQFGDICGKNVCDLGCGCGILSIGSSL 68

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSS-----VEGLFDVI 168
           L  +     +G+DI   ALEI +SN     ++   + +Q+D   FS      +   FD +
Sbjct: 69  LGAN---HCLGIDIDEDALEIFQSNCEAYELNNVVECIQADIARFSPSRNMILAKRFDTV 125

Query: 169 VSNPPY 174
           + NPP+
Sbjct: 126 LMNPPF 131


>gi|254448299|ref|ZP_05061761.1| ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HTCC5015]
 gi|198262166|gb|EDY86449.1| ribosomal RNA small subunit methyltransferase C [gamma
           proteobacterium HTCC5015]
          Length = 353

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 8/127 (6%)

Query: 63  VRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++L      F   +    T +L+D+  +  L   +      +LD   G G + L L +  
Sbjct: 177 LQLATLPGVFSLGKLDRGTRVLLDNLHSTPLSIKKDAP---LLDFAAGAGPIALWLKRRY 233

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                  VD+S  AL  A  NA  N +       Q+D    V+G +  IVSNPP+   V 
Sbjct: 234 ADLNITLVDVSAIALFCAWMNAQVNDME--VVCQQADGLQGVDGEWQAIVSNPPFHTGVE 291

Query: 180 VDCLGLE 186
            D    E
Sbjct: 292 TDYRIAE 298


>gi|296231971|ref|XP_002761380.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1-like
           isoform 2 [Callithrix jacchus]
          Length = 186

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 63/198 (31%), Gaps = 44/198 (22%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            +H  +G   F        SD +EP  +T LL+D          E   V   L++G G+G
Sbjct: 9   PLHGHVGRGTF--------SDVYEPAEDTFLLLDV---LEAAAAELAGVEICLEVGAGSG 57

Query: 110 AVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
            V   L     P    +  D++ +A       A  NGV  +                   
Sbjct: 58  VVSAFLASMIGPQALYMCTDVNPEAAACTLETARCNGVHIQ------------------- 98

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-I 227
                         +   V       +  GG  G          VS  L+  GL  +  I
Sbjct: 99  ------------PVITDLVGSHGIEAAWAGGRHGREVMDRFFPLVSDLLSPRGLFYLVTI 146

Query: 228 GYNQKVDVVRIFESRKLF 245
             N   ++++I +++ L 
Sbjct: 147 KQNNPEEILKIMKTKGLQ 164


>gi|126725275|ref|ZP_01741117.1| Predicted SAM-dependent methyltransferase [Rhodobacterales
           bacterium HTCC2150]
 gi|126704479|gb|EBA03570.1| Predicted SAM-dependent methyltransferase [Rhodobacterales
           bacterium HTCC2150]
          Length = 398

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 24/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           VR+LD+ +  G   LA    +     + VD S  AL +A+  A  +GV++RF+T  SD F
Sbjct: 224 VRVLDVFSHVGGFSLA-ALANGAKSALAVDGSTAALALAQEGAEASGVADRFETRCSDAF 282

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            ++  L      F+V++ +PP                            GL  Y  +A  
Sbjct: 283 DALTALAAEGQEFEVVICDPPAFAPNKK-----------------AAEAGLRAYEKVARL 325

Query: 213 VSRHLNKDGLCSV 225
            +  +   G   +
Sbjct: 326 ATALVADGGYLGL 338


>gi|322371733|ref|ZP_08046276.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus
           paucihalophilus DX253]
 gi|320548618|gb|EFW90289.1| protein-L-isoaspartate O-methyltransferase [Haladaptatus
           paucihalophilus DX253]
          Length = 201

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSER 149
              +      +LDLGTGTGA+ LAL    P   + +G DIS   L+ A++ A  NG+ E 
Sbjct: 37  DHADPGANDTVLDLGTGTGAIALALA---PGAERVIGRDISEGMLDEARTKAEENGI-EN 92

Query: 150 FDTLQSDWFSS-VEGLFDVIVSN 171
            +  +  +    V+G  D++VSN
Sbjct: 93  VEFGEGRFRDPNVDGEVDIVVSN 115


>gi|325108600|ref|YP_004269668.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
 gi|324968868|gb|ADY59646.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
          Length = 221

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 49/146 (33%), Gaps = 31/146 (21%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD  LA   P         +LDLG GT  + + L +  P      VD+S   L +A+ N 
Sbjct: 32  VDDFLAIDAPTPSD---WSVLDLGAGTAQIPMLLAEACPGCAITAVDLSSPMLSLARKNI 88

Query: 142 VTNGVSERFDTL--QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              G+  R       S      +  FD ++SN       ++  L       +P  SL   
Sbjct: 89  ERAGLGGRITLRMANSASLPFADNQFDAVISN------SLIHHLP------EPIESL--- 133

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                          R L  DG   V
Sbjct: 134 -----------REAVRVLQPDGQLFV 148


>gi|289679659|ref|ZP_06500549.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
           [Pseudomonas syringae pv. syringae FF5]
          Length = 130

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 1/96 (1%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL-KHESIHRILGWRDF 60
            A  ++   +     L         D  L+  +   L   I R + +      +LG   F
Sbjct: 33  NAWDEARQLVLGALHLPWEIADSYLDCRLEVDEISDLQRLIKRRIDERVPTPYLLGEAWF 92

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR 96
             +   +      PR     L++   A  L     R
Sbjct: 93  CGMSFIVDDRVLIPRSPIAELIEERFAPWLADDPAR 128


>gi|110680008|ref|YP_683015.1| hypothetical protein RD1_2799 [Roseobacter denitrificans OCh 114]
 gi|109456124|gb|ABG32329.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 407

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 24/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD+ +  G   LA          + VD S  AL +A++ A  +G ++RF T Q D F
Sbjct: 235 ARVLDVFSHVGGFSLA-ALAGGAQSALAVDGSAAALTLAEAGAKASGCADRFQTRQGDAF 293

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD+++ +PP                   + +LD    GL  Y  +A  
Sbjct: 294 EVLAALAQEGAQFDLVICDPPAFAPS--------------KQALDA---GLRAYERVARL 336

Query: 213 VSRHLNKDGLCSV 225
            +  + +DG+  +
Sbjct: 337 AATLVAEDGILGL 349


>gi|20094037|ref|NP_613884.1| methyltransferase [Methanopyrus kandleri AV19]
 gi|19887014|gb|AAM01814.1| Predicted methyltransferase [Methanopyrus kandleri AV19]
          Length = 336

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 22/152 (14%)

Query: 64  RLTLSSDTFEPR--PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           R+ L+   F PR   E  LL +  +          +   +LDL  G G + + L +  P 
Sbjct: 165 RVDLARCYFNPRLATERRLLAEDVVE---------EGSTVLDLFAGVGPITVILKRFVPS 215

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +    +++  A      N   N V  R     +   S + G FD ++ N P +    V+
Sbjct: 216 VEVTACELNPVAYRYLLENLRLNRVEARAFLGDAREVSRLVGRFDYVIMNVPKMAHRFVE 275

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                VR            +G   Y  IA   
Sbjct: 276 TAVRCVR-----------PEGRLIYYRIAPNA 296


>gi|120598126|ref|YP_962700.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
           W3-18-1]
 gi|120558219|gb|ABM24146.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
           W3-18-1]
          Length = 417

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+     G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEQEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +S++   L  D + ++ G +D +VS        +++ +G E         L G       
Sbjct: 238 LSDKITLLTED-YRNLTGEYDRVVS------IEMIEAVGHEY--------LAG------F 276

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           ++ +A      L  +G   +
Sbjct: 277 FKKLAS----LLKPNGRILL 292


>gi|109893893|gb|ABG47032.1| methyltransferase [Actinomyces naeslundii]
          Length = 477

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 60/186 (32%), Gaps = 49/186 (26%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P+  L V  A         +  V   LDLG G G   L LL+ +     V  DIS +AL 
Sbjct: 75  PDHVLGVGGAGLTLAGLTPRTRVGTALDLGCGCGIQTLYLLRHAE--HVVATDISARALA 132

Query: 136 IAKSNAVTNGVSE-------------------------------RFDTLQSDWFSSVEG- 163
               NA   GVS                                  + L+      V G 
Sbjct: 133 FTAFNAALAGVSVTGAPGAGSDIAPSSGLDSEADAASESGSNAGHLELLRGSLLEPVAGR 192

Query: 164 LFDVIVSNPPYI---ESVIVDCLGL-EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            FD+I SNPP++    +V    L L E RD        GG         +  G+  HL  
Sbjct: 193 RFDLIASNPPFVLTPPAVREAGLPLMEYRD-------AGGP----ILPGLVAGLGEHLEP 241

Query: 220 DGLCSV 225
                +
Sbjct: 242 GATAVM 247


>gi|158319773|ref|YP_001512280.1| RNA methyltransferase [Alkaliphilus oremlandii OhILAs]
 gi|158139972|gb|ABW18284.1| RNA methyltransferase, TrmA family [Alkaliphilus oremlandii OhILAs]
          Length = 450

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 16/145 (11%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            I+   +   ++  +S  +F    +T  L  +     +       D   + DL +GTG +
Sbjct: 266 YIV--EELLGLKFKISPFSFF---QTNSLGAEKLYTIAREFAGDIDDKIVFDLYSGTGTI 320

Query: 112 CLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDV 167
              +    P  K  +G++I  +A+E+AK NA  NG+ +  + +  D   +   ++   D+
Sbjct: 321 AQIMA---PVAKKVIGIEIVEEAVEMAKENAKMNGL-DNVEFIAGDVLEAVNDLKEKPDL 376

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDP 192
           IV +PP     I      ++ DF+P
Sbjct: 377 IVIDPP--RDGIHPKAIHKIIDFNP 399


>gi|257461437|ref|ZP_05626533.1| ribosomal protein L11 methyltransferase [Campylobacter gracilis
           RM3268]
 gi|257441160|gb|EEV16307.1| ribosomal protein L11 methyltransferase [Campylobacter gracilis
           RM3268]
          Length = 287

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 69/224 (30%), Gaps = 63/224 (28%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPE---TELLVDSALAFSLPRIE------------KR 96
               G       +  +     E   +    +LL+D ALAF     E             R
Sbjct: 85  QYKKGVAPVAVGKFYVRPSWCERSQDCALIDLLIDPALAFGSGHHESTNMCLALLSELAR 144

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL--- 153
           D +  LD+G G+G + +A+ K     K    D   +A+   + NA  NGV      L   
Sbjct: 145 DGMSALDVGCGSGILSIAMKKL--GAKVSACDTDEQAVAATQQNAEKNGVQIDQIWLGSV 202

Query: 154 ----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               +    ++ +  FD++V+N                      I+             +
Sbjct: 203 SSLNERGSSAAAQPQFDLVVAN---------------------IIA--------DVILIL 233

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
           +  + + L   G   +            I E  K  +  AF D 
Sbjct: 234 SVDLKKALKPGGKLVL----------SGILEKYKDRIERAFSDL 267


>gi|77919261|ref|YP_357076.1| putative oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77545344|gb|ABA88906.1| SAM-dependent methyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 392

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 24/144 (16%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L   E+    RILDL   +G+  +   +     + +G+DIS  A+ +A+ NA  N  
Sbjct: 206 ENHLALRERVAGKRILDLFCYSGSWAIHAARYGAK-EVLGIDISAGAVALAQENARLNFQ 264

Query: 147 SERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                 +Q+D F  +      +  FD I+ +PP                           
Sbjct: 265 DATCRFVQADVFDRLRELHSQKERFDGIILDPPAFIKNRKRLRE---------------- 308

Query: 201 DGLSHYRTIADGVSRHLNKDGLCS 224
            G+  Y TI       L  DG+  
Sbjct: 309 -GIKGYLTINRRAMELLATDGILF 331


>gi|329295748|ref|ZP_08253084.1| ribosomal protein L11 methyltransferase [Plautia stali symbiont]
          Length = 293

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 44/196 (22%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 108 FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTSLCLSWLDGLDLQGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGV++R                D
Sbjct: 168 GSGILAIA-ALKLGAAQAIGIDIDPQAIQASRDNAERNGVADRLSLYLPHQ-QPENLQAD 225

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           V+V+N           L   +R+  P IS             +      HL   G+ +  
Sbjct: 226 VVVTN----------ILAGPLRELAPLIS-------------VLPKAGGHLGLSGVLA-- 260

Query: 227 IGYNQKVDVVRIFESR 242
              +Q   V   +  R
Sbjct: 261 ---SQAESVCEAYADR 273


>gi|254292788|ref|YP_003058811.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814]
 gi|254041319|gb|ACT58114.1| ribosomal L11 methyltransferase [Hirschia baltica ATCC 49814]
          Length = 313

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 33/170 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L       +KR + ++LD+GTG+  + +A   +S     V  DI  +++ IAK NA  N 
Sbjct: 133 LEALADVAKKRKLGKVLDIGTGSAVLAIA-AMKSGASMAVASDIDPESIRIAKINAENNK 191

Query: 146 VSERFDTL----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +      L     ++ F   +G +D +++N   I +  +  L  ++     +++ DGG  
Sbjct: 192 MGRNLHLLVATGANNAFIRNQGKYDTVMAN---ILARPLVSLSSDI----NKLTKDGGY- 243

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                  I  G+  H              Q+  V   F  R L LV+  +
Sbjct: 244 ------IILSGLLNH--------------QEPQVKAAFAGRNLALVDRRR 273


>gi|254461239|ref|ZP_05074655.1| methyltransferase small [Rhodobacterales bacterium HTCC2083]
 gi|206677828|gb|EDZ42315.1| methyltransferase small [Rhodobacteraceae bacterium HTCC2083]
          Length = 331

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 27/146 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D A    +  I       + DLG G G +    L E+P  +    V+ +  ALE A++N
Sbjct: 170 IDPASELLMQHIPTSLSGHVADLGAGWGYLSDRALSENPSIETLHLVEDNAAALECARAN 229

Query: 141 AVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                   R +   +D  +  +   FD I+ NPP+  S          R  +P+I     
Sbjct: 230 VE----DPRAEFHWADVLNWRQSKLFDAILMNPPFHTS----------RIAEPQI----- 270

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
             G++  R      +  L  +G   +
Sbjct: 271 --GINFVRA----AASLLRPEGKLFL 290


>gi|296532806|ref|ZP_06895483.1| probable ribosomal protein L11 methyltransferase [Roseomonas
           cervicalis ATCC 49957]
 gi|296266867|gb|EFH12815.1| probable ribosomal protein L11 methyltransferase [Roseomonas
           cervicalis ATCC 49957]
          Length = 304

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
              +  R   RILDLGTG+G + +A  K     K +  DI   ++ +A+ NA  NG+  +
Sbjct: 148 FEGMAHRRPKRILDLGTGSGILAMAAAKRL-HRKVLATDIEPWSVRVAQDNANMNGLRNQ 206

Query: 150 FDTLQSDWFSSVE---GLFDVIVSN 171
           F    +D +       G +D++ +N
Sbjct: 207 FRAKLADGWKHRSVRAGTYDLVFAN 231


>gi|254429542|ref|ZP_05043249.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Alcanivorax
           sp. DG881]
 gi|196195711|gb|EDX90670.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Alcanivorax
           sp. DG881]
          Length = 434

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 88/256 (34%), Gaps = 47/256 (18%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH----ESIHRILGWRDFYNV 63
                    + + Q +    + L       L      SL+      S H  LG  DF+++
Sbjct: 108 KVIRYFAANVDAMQALEGGFAALSKPALKMLHRYNRNSLQGSRRNISAHYDLGN-DFFSL 166

Query: 64  RLT----LSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            L      SS  F PRP+  L  + A    L     R++ +  + +L++GTG G + L  
Sbjct: 167 FLDRTMMYSSAVF-PRPDASL--EEASVHKLELICQRLQLQPGMTLLEIGTGWGGLALHA 223

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +           IS +    A+      G+ +    L+ D +  + G +D +VS     
Sbjct: 224 AQHY-GVTVTTTTISREQARYARQQVADAGLDDCITILEKD-YRELTGQYDRVVS----- 276

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               V+ +     +F P     G  D           + + L  +GL  +     Q + V
Sbjct: 277 ----VEMIEAVGAEFLP-----GYFD----------VLGKRLKPEGLLLI-----QAITV 312

Query: 236 VRIFESRKLFLVNAFK 251
                   L  V+  K
Sbjct: 313 PDQRFDYALKQVDFIK 328


>gi|188587914|ref|YP_001920257.1| ribosomal protein L11 methyltransferase [Clostridium botulinum E3
           str. Alaska E43]
 gi|226710063|sp|B2V2I9|PRMA_CLOBA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|188498195|gb|ACD51331.1| ribosomal protein L11 methyltransferase [Clostridium botulinum E3
           str. Alaska E43]
          Length = 313

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 36/198 (18%)

Query: 57  WRDFYNV-----RLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEK--R 96
           W+ +Y       R+ +     E  P+ E LV                    +  +EK   
Sbjct: 117 WKKYYKPSNITDRIVVKPMWEEYLPKNEELVIELDPGMAFGTGTHETTRMCVKALEKYVE 176

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               + D+G G+G + +A   +      +GVD+   A+E AK N   N + +  + L+ +
Sbjct: 177 HDSTVFDVGCGSGILAIA-AAKLGAKLALGVDLDPVAVESAKENVGLNDL-DNIEILEGN 234

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG---- 212
               ++G  D++V+N   I + I+  L  +V       +L+ G  GL     I       
Sbjct: 235 LLDVIDGKADIVVAN---IIAEIICILTDDVSK-----ALNKG--GLFITSGIIHERVDM 284

Query: 213 VSRHLNKDGLCSVEIGYN 230
           V+  L++ G   +E+  +
Sbjct: 285 VTSKLDECGFEVMEVNKD 302


>gi|58264968|ref|XP_569640.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57225872|gb|AAW42333.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 482

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 16/150 (10%)

Query: 61  YNVRLTLSSDTFEPR-PETELLVDSALAFSLPRIEKRD--VVRILDLGTGTGAV-CLALL 116
           +N+ + L  D   P  P     +   L    P +       +RILD+GTG  A+  + L 
Sbjct: 58  WNLDVDLREDRLCPTIPNRLDYIYHVLD-LEPHLPSSSLRPLRILDIGTGATAIYPILLA 116

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD-----WFSSVEGL-----F 165
           +  P  + V  +I   +   AK+    N +       L+S       F  +E       +
Sbjct: 117 RLRPDSRIVATEIDESSYNHAKATLEKNNIPPSSITVLKSPTPDPILFPLLECKGKSEDW 176

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           D+ + NPP+  S      G+E++D     +
Sbjct: 177 DLTICNPPFFASSQEMLQGMELKDRQAHAA 206


>gi|161936282|ref|YP_131495.2| ribosomal protein L11 methyltransferase [Photobacterium profundum
           SS9]
 gi|60390454|sp|Q6LLY5|PRMA_PHOPR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
          Length = 294

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 52/210 (24%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P    +L+D  LAF           L  ++ +D+V   I+D G 
Sbjct: 109 FGRRLWICPSWREAPEPNAVNVLLDPGLAFGTGTHPTTSLCLEWLDGQDLVGKTIIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     K +G+DI  +A++ ++ NA  NGVS++            +   D
Sbjct: 169 GSGILAIAALKLGAE-KVIGIDIDPQAIQASRDNAERNGVSDKLALFLPQ-DQPTDVQAD 226

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-- 224
           V+V+N           L   +R+  P              +++           G  +  
Sbjct: 227 VVVAN----------ILAGPLRELSP------------VIKSLV-------KPGGKLAIS 257

Query: 225 --VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
             +EI   Q  DV   +           +D
Sbjct: 258 GVLEI---QAEDVSTYYSDELALDPVVARD 284


>gi|256847036|ref|ZP_05552482.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
 gi|256715700|gb|EEU30675.1| conserved hypothetical protein [Lactobacillus coleohominis
           101-4-CHN]
          Length = 250

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 56/120 (46%), Gaps = 11/120 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++  SS+ F    +  LL D        R++       +D+  G GA+ L L ++   
Sbjct: 19  GIKIIQSSEVFAFSLDAVLLADFVRPNHRQRLQT------IDICAGNGAIGLFLNRKLGG 72

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   V++  +  ++A+ +   N ++ER+  + +D  +  +      +D++  NPPY +S
Sbjct: 73  -QFTEVELQPRLADMARRSISLNNLTERYRVINADVKNIYDYVHKDAYDIVTCNPPYFKS 131


>gi|163781933|ref|ZP_02176933.1| ribosomal protein L11 methyltransferase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159883153|gb|EDP76657.1| ribosomal protein L11 methyltransferase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 246

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 28/157 (17%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+   +LD+G G+G + + + K     + VG+D+S  A+  +  NA  NGVS        
Sbjct: 110 REGDSLLDVGCGSGILSI-VAKMLGASRVVGIDVSEDAVRESLENAELNGVSIEV---YR 165

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP---RISLDGGIDGLSHYRTIADG 212
              S +E  F+V+V+N      + +     E+R+  P   R ++  G      Y+   + 
Sbjct: 166 KTPSELEERFEVVVAN------LEMPIFRKELRNILPLMNRAAVFSG-----IYKK--EE 212

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +   L+      +E    + +   RI E    F +  
Sbjct: 213 LEEFLH-----MIE---QEGLKADRILEDEDWFCIGV 241


>gi|88800850|ref|ZP_01116405.1| cyclopropane-fatty-acyl-phospholipid synthase [Reinekea sp. MED297]
 gi|88776423|gb|EAR07643.1| cyclopropane-fatty-acyl-phospholipid synthase [Reinekea sp. MED297]
          Length = 410

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 40/226 (17%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLAL 115
           F +  +  SS  + P  ++ L  + A  F L RI ++        +L++GTG G++ +  
Sbjct: 147 FLDESMMYSSAIY-PSNDSTL--EEAQQFRLQRIGEKLHLGPDNHLLEIGTGWGSLAIYA 203

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            K     K     IS +    A+       + +R   L++D +  + G FD +VS    I
Sbjct: 204 AKHF-GCKVTTTTISEEQYRYAQQRIRDENLDDRITLLKTD-YRLLTGQFDRLVS-IEMI 260

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSH-------------YRTIADGVSRHLNKDGL 222
           E+V    L    R  +  +S     DG++              YR   D + +++   G 
Sbjct: 261 EAVGHRYLPGYFRKINELLS----DDGIALLQCITMPDQRYHQYRKSVDFIRKYIFPGGH 316

Query: 223 C--------SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVL 260
                     +    +Q    V  FE          KD+  ++R +
Sbjct: 317 LPSISLITRQI---ADQTQMTVNHFEDITQHYARTLKDW--HERFI 357


>gi|315426169|dbj|BAJ47813.1| methyltransferase [Candidatus Caldiarchaeum subterraneum]
          Length = 318

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 18/176 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY 61
           +A R +   + R  G+   + ++     +   +R      +      E+++R  G     
Sbjct: 89  EARRLAELIMARHRGV---RTVLQKVGEVSGVERVASFRVLAGDGVTETVYRETG----C 141

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             +L ++   F PR  TE L            +  +   +LD+  G G   + + ++ P 
Sbjct: 142 VYKLDVARVFFSPRLSTERL--------RVAAQVGENETVLDMFAGVGPFSILIARKHPS 193

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
                V+ +  A      N   N V ++      D       ++  F+ ++ N PY
Sbjct: 194 TTIYAVEKNPAACSYLLENIKLNKVEKQVKPFCGDAAEIVPQLDKQFNRVIMNLPY 249


>gi|225376677|ref|ZP_03753898.1| hypothetical protein ROSEINA2194_02319 [Roseburia inulinivorans DSM
           16841]
 gi|225211560|gb|EEG93914.1| hypothetical protein ROSEINA2194_02319 [Roseburia inulinivorans DSM
           16841]
          Length = 498

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 21/137 (15%)

Query: 54  ILGWRDFY----NVRLTLSSDTF---------EPRPETELLVDSALAFSLPRIEKRDVVR 100
           + G   FY     +R  ++  +F                  +  AL              
Sbjct: 296 LYGQDFFYEELLGLRFKITPFSFFQTNSLGAEVLYQTAREFIGDALPSGTDADIAEHGKI 355

Query: 101 ILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF- 158
           + DL +GTG +   L   SP  K  +GV+I  +A+E AK NA  NG+    + +  D   
Sbjct: 356 VFDLYSGTGTIAQML---SPVAKKVIGVEIIEEAVEAAKENAQLNGL-HNCEFIAGDVLK 411

Query: 159 --SSVEGLFDVIVSNPP 173
              S+E   D IV +PP
Sbjct: 412 VIDSIEEKPDYIVLDPP 428


>gi|153828707|ref|ZP_01981374.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           623-39]
 gi|148875860|gb|EDL73995.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           623-39]
          Length = 432

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 204 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQHY-GCKVTTTTISEEQYAYAQQKITALG 262

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 263 LNNQITLLKQD-YRLLSGQYDKLVS 286


>gi|95929170|ref|ZP_01311914.1| rRNA (guanine-N(2)-)-methyltransferase [Desulfuromonas acetoxidans
           DSM 684]
 gi|95134668|gb|EAT16323.1| rRNA (guanine-N(2)-)-methyltransferase [Desulfuromonas acetoxidans
           DSM 684]
          Length = 375

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 26/153 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                I+DLG G G + +   ++ P      VD S +A++ A+ N               
Sbjct: 230 PPAKVIIDLGCGNGILGITAARQQPEAHLTFVDESYRAVDSARINFEAIFGHRPARFEVI 289

Query: 156 DWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  + ++    D+I++NPP+ +  +V                     G      +     
Sbjct: 290 DCLNGIDRDSADLIINNPPFHQQQVV---------------------GDQVAWQMFRQAR 328

Query: 215 RHLNKDGLCSVEIGYNQ---KVDVVRIFESRKL 244
           + L + G   V +G         + R+F + KL
Sbjct: 329 QVLGRSGQLWV-VGNRHLGYHTKLKRLFGNCKL 360


>gi|59712995|ref|YP_205771.1| ribosomal protein L11 methyltransferase [Vibrio fischeri ES114]
 gi|197335525|ref|YP_002157181.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11]
 gi|81310870|sp|Q5E263|PRMA_VIBF1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710127|sp|B5FC65|PRMA_VIBFM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|59481096|gb|AAW86883.1| methylase for 50S ribosomal subunit protein L11 [Vibrio fischeri
           ES114]
 gi|197317015|gb|ACH66462.1| ribosomal protein L11 methyltransferase [Vibrio fischeri MJ11]
          Length = 294

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 40/191 (20%)

Query: 3   ALRDSHSFLCRV-TGLSSHQVI----VDPDSVLDDR--QRFFLTNAIVRSLKHESIHRIL 55
           AL D+ + +  V T L + +++          L+D+  +R ++ N          +    
Sbjct: 59  ALYDAEADMDFVITQLKASRLLEEGFAHKIEQLEDKDWEREWMDNF-------HPMQ--- 108

Query: 56  GWRDFYNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRI 101
                +  RL +       P P+   +++D  LAF           L  +E  D     +
Sbjct: 109 -----FGKRLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTSLCLEWLEGLDLEGKTV 163

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D G G+G + +A   +    K +G+DI  +A+  +K NA  NGV+++ +          
Sbjct: 164 VDFGCGSGILAIA-AIKLGAAKVIGIDIDPQAILASKDNATRNGVADQIELYLPQ--DQP 220

Query: 162 EGLF-DVIVSN 171
           EGL  DV+V+N
Sbjct: 221 EGLIADVVVAN 231


>gi|84393067|ref|ZP_00991833.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01]
 gi|84376319|gb|EAP93201.1| ribosomal protein L11 methyltransferase [Vibrio splendidus 12B01]
          Length = 295

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV+E+ +          EGL  
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|146296788|ref|YP_001180559.1| protein of unknown function Met10 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410364|gb|ABP67368.1| SAM-dependent methyltransferase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 389

 Score = 60.9 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  N V  + + + S+ F  
Sbjct: 218 VLDCFCHTGGFTVNAAK-FGASKVIGVDISDTAIEQAMKNAKLNNVENKCEFVVSNVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +DV++ +PP      V  +    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDVVILDPPAFAKS-VHTIENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|262274038|ref|ZP_06051850.1| cyclopropane-fatty-acyl-phospholipid synthase [Grimontia hollisae
           CIP 101886]
 gi|262221848|gb|EEY73161.1| cyclopropane-fatty-acyl-phospholipid synthase [Grimontia hollisae
           CIP 101886]
          Length = 412

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 77/192 (40%), Gaps = 30/192 (15%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  +E   ET+ L + A    +     +++ +    ++++
Sbjct: 142 HYDLGNDLYERFLDQEMLYSSGIYE--SETDTL-ERAQFQKMDRLCQQLQLKPTDHLIEI 198

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG G + +   K     K     IS +  E AKS     G+ ++   L+ D +  +EG 
Sbjct: 199 GTGWGGMAIHAAKHY-GCKVTTTTISNEQYEWAKSRVEQEGLGDKITLLKKD-YRDLEGQ 256

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-------------AD 211
           +D +VS    IE+V    L   ++  +  +      +GL   + I              D
Sbjct: 257 YDKLVS-IEMIEAVGKQFLATYIKKCESLL----KPNGLMAIQAITIADQRYERYSNNVD 311

Query: 212 GVSRHLNKDGLC 223
            + +H+   G  
Sbjct: 312 FIQKHIFPGGFL 323


>gi|126732723|ref|ZP_01748519.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sagittula stellata
           E-37]
 gi|126706853|gb|EBA05923.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sagittula stellata
           E-37]
          Length = 400

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 13/148 (8%)

Query: 71  TFEPRPETELLVDSAL----AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
            + PRP+  L  D A     A    ++     +R+LD+G G G + L L ++    +  G
Sbjct: 137 AYWPRPDMTL--DEAQDAKKAHIAAKLRIEPGMRVLDIGCGWGGLGLTLARD-HGARVTG 193

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           V +S   L  A++ A   G+ +  D    D +  ++  FD +VS       ++       
Sbjct: 194 VTLSENQLATAQARARAEGLEDVTDFRLLD-YRKLDETFDRVVSV-----GMLEHVGAPH 247

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVS 214
             ++  +++   G DG++   +I     
Sbjct: 248 FDEYFAKVADLMGADGIALIHSIVKSGP 275


>gi|109899040|ref|YP_662295.1| methyltransferase type 12 [Pseudoalteromonas atlantica T6c]
 gi|109701321|gb|ABG41241.1| Methyltransferase type 12 [Pseudoalteromonas atlantica T6c]
          Length = 422

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 19/170 (11%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            +   +       RILD+G   G   L L +  P  + + VD++  +L  A + A + G+
Sbjct: 191 NWLKTQHPDFAPKRILDIGCTVGHNALPLAEHFPDAEVIAVDVARPSLRYAHARAKSLGL 250

Query: 147 SERFDTLQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-- 201
           S     +Q+   D     +G FD+I ++  ++  +    L   ++  +  ++ DGG++  
Sbjct: 251 S-NIQFVQANAEDLSQYDDGSFDLITTS-MFLHELSHQSLPKILKSINRLLA-DGGLNLH 307

Query: 202 -------GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                  G+  Y+        + N +       G   ++D+ ++F     
Sbjct: 308 LEQPQYTGMDVYQQFIRDWDTYFNNEPYW----GPMHELDLPKVFAECGF 353


>gi|258542158|ref|YP_003187591.1| methyltransferase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633236|dbj|BAH99211.1| methyltransferase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636295|dbj|BAI02264.1| methyltransferase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639348|dbj|BAI05310.1| methyltransferase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642404|dbj|BAI08359.1| methyltransferase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645459|dbj|BAI11407.1| methyltransferase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648512|dbj|BAI14453.1| methyltransferase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651565|dbj|BAI17499.1| methyltransferase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654556|dbj|BAI20483.1| methyltransferase [Acetobacter pasteurianus IFO 3283-12]
          Length = 251

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 48/136 (35%), Gaps = 16/136 (11%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L++G G GA  L LL       G GV+       +A+ N   N   +    
Sbjct: 39  VPARTGQHVLEIGCGAGAGLLCLLHRISTIHGTGVEKESDTAALAQKNMAANQ-QQNIRI 97

Query: 153 LQ---SDWF----SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           L     D F       E  FD  ++NPP+   +         RD   R+       G   
Sbjct: 98  LNATFPDVFLADTPQPEQYFDHCMANPPWHAPLGTASAHPR-RDLARRM-------GADT 149

Query: 206 YRTIADGVSRHLNKDG 221
             T  +G +R L   G
Sbjct: 150 LPTWIEGAARILRHKG 165


>gi|256112975|ref|ZP_05453878.1| Cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 3 str. Ether]
 gi|265994410|ref|ZP_06106967.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 3 str. Ether]
 gi|262765523|gb|EEZ11312.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 3 str. Ether]
          Length = 426

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPIATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|126659753|ref|ZP_01730881.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110]
 gi|126619001|gb|EAZ89742.1| hypothetical protein CY0110_23346 [Cyanothece sp. CCY0110]
          Length = 241

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 25/151 (16%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +L++D+ +A         D   +LDLG GTG + L LLK  P  K V +D S + ++
Sbjct: 28  PHYDLMLDTLVACV-----PIDTRHVLDLGCGTGELSLKLLKHCPDAKIVALDYSPRMIK 82

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLF-DVIVSNP-PYIESVIVDCLGLEVRDFDPR 193
           +A+S       S+R   +++D+ +   G   + I SN    + S+ +  L  E++     
Sbjct: 83  MAQSKLEKTPFSDRITFIEADFGAWANGEIKEKIGSNFNACVSSLAIHHLTDEMKY---- 138

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                          +   V+++L   G   
Sbjct: 139 --------------KLLTCVAKNLTSGGCFW 155


>gi|313891060|ref|ZP_07824679.1| ribosomal protein L11 methyltransferase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120423|gb|EFR43543.1| ribosomal protein L11 methyltransferase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 317

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIFAFDLDDVAVRVAEENIALNQETSNIQVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +    VE    VIV+N                      ++             + +   R
Sbjct: 229 NLLKGVEQKAQVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            L+ +G   +   I       V +  E    FL
Sbjct: 260 LLDDEGYLIMSGIISEKW-DMVRKSAEDAGFFL 291


>gi|271498832|ref|YP_003331857.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586]
 gi|270342387|gb|ACZ75152.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech586]
          Length = 295

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 30/145 (20%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER +      
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK- 216

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
               +   DV+V+N           L   +R+  P IS             +      HL
Sbjct: 217 DQPKDLSADVVVAN----------ILAGPLRELAPLIS-------------VLPKAGGHL 253

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESR 242
              G+ +     +Q   V + +E++
Sbjct: 254 GLSGILA-----SQAQSVAQAYEAQ 273


>gi|290560966|gb|ADD37885.1| N6-adenine-specific DNA methyltransferase 1 [Lepeophtheirus
           salmonis]
          Length = 215

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 25/203 (12%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVG 126
            D +EP  ++ L++D  L   L  +  +     +++G+G+G +   +A    S       
Sbjct: 14  EDVYEPAEDSYLMLD-VLEKQLKEL--KPPTICVEIGSGSGVLIGGVASALGSVNAAYFA 70

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCL 183
            D+S  A          N  S   + L +D       ++G  D+++ NPPY+ +   +  
Sbjct: 71  TDLSPLACIATVQ--TGNTSSVPLNVLCTDISFGLDRLKGSVDILLCNPPYVATPFEEIT 128

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK---DGLCSVEIGYNQKVDVVRIFE 240
               +D   + S  GG  G +    +       L+         +E    Q  DV  + E
Sbjct: 129 A--YKDDLIKASWAGGPRGRNVTDKVIRLCKDLLSPVTGRAFIVLE----QCNDVDSVME 182

Query: 241 SRKLFLVNAFKDY-----GGNDR 258
                 V    D       G +R
Sbjct: 183 FT-TEEVGLKADICGERKAGRER 204


>gi|269926088|ref|YP_003322711.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum
           ATCC BAA-798]
 gi|269789748|gb|ACZ41889.1| ribosomal protein L11 methyltransferase [Thermobaculum terrenum
           ATCC BAA-798]
          Length = 315

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 46/140 (32%), Gaps = 24/140 (17%)

Query: 47  KHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI----- 101
            H  I            RL +        P+   +V                 R+     
Sbjct: 119 AHYPIIH-------AGERLVIKPAWLAYSPQNNEIVIELDPGMAFGTGLHPTTRLCLDAI 171

Query: 102 ----------LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                     LDLGTG+G +  A+ K     + + VDI   A+  AKS    NG+S++  
Sbjct: 172 ERYMHEESVCLDLGTGSGILAAAMAKLGAK-QVLAVDIDPVAVSAAKSTVERNGISDKVQ 230

Query: 152 TLQSDWFSSVEGLFDVIVSN 171
            L+          +D I +N
Sbjct: 231 VLEGSI-EKATAQYDFIAAN 249


>gi|167031818|ref|YP_001667049.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida GB-1]
 gi|226712966|sp|B0KNH3|RSMC_PSEPG RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|166858306|gb|ABY96713.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida GB-1]
          Length = 332

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   L +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDGLPDGHMLDFGCGAGVLGATLKRRYPQSRVTMLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            NG+    D +  D   +      +I+SNPP+
Sbjct: 237 ANGLEG--DVISGDGIDAAPTELSLILSNPPF 266


>gi|308487672|ref|XP_003106031.1| hypothetical protein CRE_20319 [Caenorhabditis remanei]
 gi|308254605|gb|EFO98557.1| hypothetical protein CRE_20319 [Caenorhabditis remanei]
          Length = 224

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D V+++D+G G G +             +G+D+   AL++   N     V ER + LQ+D
Sbjct: 47  DGVKLVDVGCGCGMLMTTAATLYEPESVLGIDLDEDALKVCARNIEFADVQERCEVLQAD 106

Query: 157 WFSS----VEGLFDVIVSNPPY 174
              S      G FDV + NPP+
Sbjct: 107 VLDSETDLPRGTFDVAIINPPF 128


>gi|302346617|ref|YP_003814915.1| ribosomal protein L11 methyltransferase [Prevotella melaninogenica
           ATCC 25845]
 gi|302150599|gb|ADK96860.1| ribosomal protein L11 methyltransferase [Prevotella melaninogenica
           ATCC 25845]
          Length = 289

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LD G GTG + + +  +    + V  DI   ++  A+ NA  NGV    D L+ D   
Sbjct: 155 RVLDCGCGTGILGI-VAAKCGAKEVVSYDIDEWSVRNAEHNAELNGVE--LDVLEGDRRV 211

Query: 158 FSSVEGLFDVIVSN 171
            S V G+FDVI++N
Sbjct: 212 LSHVSGVFDVILAN 225


>gi|209965323|ref|YP_002298238.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum
           SW]
 gi|209958789|gb|ACI99425.1| ribosomal protein L11 methyltransferase [Rhodospirillum centenum
           SW]
          Length = 289

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 37/161 (22%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +   LD+G G+G +  A+ +       +GVDI   ++EIA  NAV N V+   D    +
Sbjct: 149 PLGHALDMGCGSGILGFAIARLWRMP-VLGVDIDDLSVEIAAENAVLNRVAHLVDLRAGN 207

Query: 157 WFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            + + E      FD+IV+N      ++   L                         +A  
Sbjct: 208 GYDTPEVRRRAPFDLIVAN------ILAKPLA-----------------------RMAPQ 238

Query: 213 VSRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           + RHL   G   +  G    Q+  V+    ++ L LV  ++
Sbjct: 239 LRRHLAPGGTAVL-SGLLRRQENMVLAAHRAQGLHLVRRYR 278


>gi|325957061|ref|YP_004292473.1| hypothetical protein LAC30SC_07100 [Lactobacillus acidophilus 30SC]
 gi|325333626|gb|ADZ07534.1| hypothetical protein LAC30SC_07100 [Lactobacillus acidophilus 30SC]
          Length = 343

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 53/170 (31%), Gaps = 17/170 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++R+      F    +T LL   A          RD  ++ DL  G        +     
Sbjct: 17  SLRIIQDKTAFSFSMDTLLLAYWAKGLI------RDRDKVADLCAGN-CAATIYMSYFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    + +  ++ +      +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQDEIYSQAVRSIELNDMENRISVYKDNILNAPKFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  + +    R  L      L     I    S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHEL------LIDLEHIIAVASGLLKMKGKMFMVH 173


>gi|28871777|ref|NP_794396.1| methyltransferase [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213966769|ref|ZP_03394920.1| methyltransferase [Pseudomonas syringae pv. tomato T1]
 gi|301383277|ref|ZP_07231695.1| methyltransferase, putative [Pseudomonas syringae pv. tomato Max13]
 gi|302062484|ref|ZP_07254025.1| methyltransferase, putative [Pseudomonas syringae pv. tomato K40]
 gi|302133466|ref|ZP_07259456.1| methyltransferase, putative [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|81729568|sp|Q87WA9|RLMG_PSESM RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|28855029|gb|AAO58091.1| methyltransferase, putative [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213928619|gb|EEB62163.1| methyltransferase [Pseudomonas syringae pv. tomato T1]
 gi|331018916|gb|EGH98972.1| methyltransferase, putative [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 374

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 24/142 (16%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL   LP  +     R+ DLG G G + +A   E+P      VD S  A++ A  N   +
Sbjct: 221 ALLPCLP--KNLGAARVADLGCGNGVLAIASALENPDAHYTLVDESYMAVQSATENWRAH 278

Query: 145 GVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                     +D          DV++ NPP+ +  +V                     G 
Sbjct: 279 LGERDVVLRAADGLDTQQPDSLDVVLCNPPFHQQQVV---------------------GD 317

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                +       L   G   +
Sbjct: 318 FLAWRMFLQARAALVTGGALYI 339


>gi|317177699|dbj|BAJ55488.1| Type II modification enzyme [Helicobacter pylori F16]
          Length = 383

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 59/171 (34%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K++   +L+  TG G    + LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KQNHGSVLEPSTGDG----SFLKHLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|315658146|ref|ZP_07911018.1| ribosomal protein L11 methyltransferase [Staphylococcus lugdunensis
           M23590]
 gi|315496475|gb|EFU84798.1| ribosomal protein L11 methyltransferase [Staphylococcus lugdunensis
           M23590]
          Length = 312

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 20/145 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+GTG+G + +A            +DI   A+++A  N   N      +    +    
Sbjct: 177 VIDVGTGSGILSIAC-HLLGVRHIKAIDIDDMAIKVAIENFKKNHCDAVIEANTGNLLKD 235

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +DV+++N   I + I+D +  +  +     +L+   DG      I     +HL   
Sbjct: 236 ETKKYDVVIAN---ILAHIIDEMIEDAYN-----TLN--EDGYFITSGIITE--KHLE-- 281

Query: 221 GLCSVEIGYNQ-KVDVVRIFESRKL 244
               +E    Q   D++ I ++   
Sbjct: 282 ----IEAHMKQVGFDIISIEQNNGW 302


>gi|184155188|ref|YP_001843528.1| hypothetical protein LAF_0712 [Lactobacillus fermentum IFO 3956]
 gi|183226532|dbj|BAG27048.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
          Length = 250

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 80/188 (42%), Gaps = 19/188 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            V++  SS+ F         +D+ L  +  R  ++    ++DL  G GAV L L +    
Sbjct: 20  GVQIIQSSEVFAFS------LDAVLLAAFVRPSQKRRALLVDLCAGNGAVGLFLNRRFAG 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIES 177
            + V V++  +  ++A  +   N +++R+  + +D         +   DV+V NPPY + 
Sbjct: 74  -QVVEVELQQRLADMADRSIQLNDLADRYQVINADVKDVYQYVAKDQADVVVCNPPYFKD 132

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     ++ +P +++      L+    T+ D +S  L  +G   +    ++  +++
Sbjct: 133 Q-----PASQKNPNPYLAIARHE--LTIDLATVCDRMSGLLKMNGHGYLVHRPDRLTEIL 185

Query: 237 RIFESRKL 244
                 +L
Sbjct: 186 ATLADHRL 193


>gi|330938128|gb|EGH41850.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 374

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWQATLGDR 282

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 DVQVRAGDGLEMQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQARAALVTGGALYI 339


>gi|188535014|ref|YP_001908811.1| Putative ribosomal RNA small subunit methyltransferase D [Erwinia
           tasmaniensis Et1/99]
 gi|229564330|sp|B2VDD5|RLMG_ERWT9 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|188030056|emb|CAO97942.1| Putative ribosomal RNA small subunit methyltransferase D [Erwinia
           tasmaniensis Et1/99]
          Length = 375

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  +       I+DLG G G + L  L+++P  +   +D S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPDDIDGEIVDLGCGNGVIGLMALRQNPLAQVHFLDESYMAVASSRMNVE 273

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +   ++  +         ++ NPP+ +          V D          
Sbjct: 274 LNCPDDLARCEFRVNNALAGYPSDRLHAVLCNPPFHQ-------QNAVTDH--------- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 318 -----IAWQMFRDARRCLQYGGEL 336


>gi|71002480|ref|XP_755921.1| TAM domain methyltransferase [Aspergillus fumigatus Af293]
 gi|66853559|gb|EAL93883.1| TAM domain methyltransferase, putative [Aspergillus fumigatus
           Af293]
 gi|159129976|gb|EDP55090.1| TAM domain methyltransferase, putative [Aspergillus fumigatus
           A1163]
          Length = 274

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 49/140 (35%), Gaps = 33/140 (23%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +  P +      RILD+GTGTG   L +  + P  + VG D+S       + N      +
Sbjct: 27  YRAPILNDGRPKRILDVGTGTGIWALEMADDFPDAEIVGTDLSPI-----QPNWAPPNCT 81

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              D  +SDW  +    FD       YI +  +                 GG  G+  + 
Sbjct: 82  FNVDDAESDWTFTPAEAFD-------YIHARSL-----------------GG--GIGDWN 115

Query: 208 TIADGVSRHLNKDGLCSVEI 227
                  RH    G   VEI
Sbjct: 116 RFLRQAYRHTKPGGW--VEI 133


>gi|262067059|ref|ZP_06026671.1| putative N-6 adenine-specific DNA methylase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379226|gb|EFE86744.1| putative N-6 adenine-specific DNA methylase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 243

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 83/199 (41%), Gaps = 30/199 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +            ++  +ILD+GTG   + L L K++  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVNLT-------KNTKKILDIGTGNAVIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  GV+I   + ++A  N   N ++E+   +  +  + ++    G FD+++SNPP+ + 
Sbjct: 67  AKIYGVEIQEISYQLALRNININNLNEQIYIIYDNIKNYLKHFTIGSFDIVLSNPPFFKV 126

Query: 178 VIVDCL-----GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                L      L +   +  ++LD           + +  S+ +   G   +     + 
Sbjct: 127 TENKELLNDLEQLSIARHEVELNLD----------ELIEISSKLVKDRGYFYLVH---RA 173

Query: 233 VDVVRIFESRKLFLVNAFK 251
             +  I  + + +   A K
Sbjct: 174 DRLSEILVTLQRYNFEAKK 192


>gi|163743145|ref|ZP_02150527.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10]
 gi|161383562|gb|EDQ07949.1| hypothetical protein RG210_14630 [Phaeobacter gallaeciensis 2.10]
          Length = 404

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +      +   ++LD+ +  G   LA +  +   +   VD S  AL++A
Sbjct: 210 TGLFYDQRDNHAFAAKLVKPGAKVLDVFSHVGGFGLA-MLAAGAAEATCVDGSAPALDLA 268

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +  A  N  ++RF   Q D F  +         FDV++ +PP                  
Sbjct: 269 REGAAANDFADRFAARQGDAFEVLTQLAEEGVQFDVVICDPPAFAPS------------- 315

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +L+    GL  Y  IA   +  +   G   +
Sbjct: 316 -KQALEA---GLRAYERIAKLAAPLVAPGGYLGL 345


>gi|116073695|ref|ZP_01470957.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916]
 gi|116069000|gb|EAU74752.1| hypothetical protein RS9916_34632 [Synechococcus sp. RS9916]
          Length = 400

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R     +  +    S P +     +RILD G GTG     L   +P    + VDIS  AL
Sbjct: 38  RWNLRSVHQAVFGVSKPPLSSAPPLRILDAGCGTGVTTDYLCHSNPGADVLAVDISAGAL 97

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
           ++A+     +G +E   +L+ +  S +    EG FD I S
Sbjct: 98  DVARERLRRSGAAEVVSSLRQEQRSLLDLAGEGAFDYINS 137


>gi|121595009|ref|YP_986905.1| type 11 methyltransferase [Acidovorax sp. JS42]
 gi|120607089|gb|ABM42829.1| Methyltransferase type 11 [Acidovorax sp. JS42]
          Length = 220

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 4/113 (3%)

Query: 62  NVRLTLSSDTFEPRPETELLV---DSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLK 117
             R  L+     P  +  +++   + A   +L  +   +    + D G GTG + L    
Sbjct: 7   GFRPALAHHVLTPLYDRVVVLTTREQAFKPALVAQASIQHGHDVSDAGCGTGTLALLAAT 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             P  +  GVD     L +A+  A +     RFD   S      +G FD +VS
Sbjct: 67  ACPQARVTGVDADPAILSLARRKAASVAAPIRFDEGLSTDLPYGDGSFDRVVS 119


>gi|330825286|ref|YP_004388589.1| type 11 methyltransferase [Alicycliphilus denitrificans K601]
 gi|329310658|gb|AEB85073.1| Methyltransferase type 11 [Alicycliphilus denitrificans K601]
          Length = 220

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 4/113 (3%)

Query: 62  NVRLTLSSDTFEPRPETELLV---DSALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLK 117
             R  L+     P  +  +++   + A   +L  +   +    + D G GTG + L    
Sbjct: 7   GFRPALAHHVLTPLYDRVVVLTTREQAFKPALVAQASIQHGHDVSDAGCGTGTLALLAAT 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             P  +  GVD     L +A+  A +     RFD   S      +G FD +VS
Sbjct: 67  ACPQARVTGVDADPAILSLARRKAASVAAPIRFDEGLSTDLPYGDGSFDRVVS 119


>gi|300785111|ref|YP_003765402.1| methyltransferase [Amycolatopsis mediterranei U32]
 gi|299794625|gb|ADJ45000.1| methyltransferase [Amycolatopsis mediterranei U32]
          Length = 205

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 61/183 (33%), Gaps = 44/183 (24%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F++   T      EPR     LV+                R LDLG+G G   L L +  
Sbjct: 11  FWDGHYTAHLPDGEPRANVR-LVEVV--------SPLAPGRALDLGSGAGGDALWLARR- 60

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESV 178
             +     DIS  AL      A   G+++R    + D  ++   G FD++ ++  Y+ + 
Sbjct: 61  -GWHVTAADISAVALAHLGRRARDLGLADRITGARHDLAATFPAGPFDLVSAH--YLHTS 117

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVEIG------YNQ 231
               L  +                      +    +  L+  G L  VE G      +NQ
Sbjct: 118 FP--LPRD---------------------RVLRQAAEALSPGGRLLVVEHGSVAPWSWNQ 154

Query: 232 KVD 234
              
Sbjct: 155 DPA 157


>gi|289550651|ref|YP_003471555.1| Ribosomal protein L11 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289180183|gb|ADC87428.1| Ribosomal protein L11 methyltransferase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 312

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 20/145 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+GTG+G + +A            +DI   A+++A  N   N      +    +    
Sbjct: 177 VIDVGTGSGILSIAC-HLLGVRHIKAIDIDDMAIKVAIENFKKNHCEAVIEANTGNLLKD 235

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               +DV+++N   I + I+D +  +  +     +L+   DG      I     +HL   
Sbjct: 236 ETKKYDVVIAN---ILAHIIDEMIEDAYN-----TLN--EDGYFITSGIITE--KHLE-- 281

Query: 221 GLCSVEIGYNQ-KVDVVRIFESRKL 244
               +E    Q   D++ I ++   
Sbjct: 282 ----IEAHMKQVGFDIISIEQNNGW 302


>gi|75908832|ref|YP_323128.1| hypothetical protein Ava_2618 [Anabaena variabilis ATCC 29413]
 gi|75702557|gb|ABA22233.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 399

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 29/141 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   +   +  +RILD G G+G     L+  +P  + VG+D+S   L +AK     
Sbjct: 41  AAYSFCTGQKPTKQDIRILDAGCGSGVGTEYLVHLNPQAQVVGIDLSAGTLAVAKERCQR 100

Query: 144 NGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           +G + R +      +    + G F++I                + V    P         
Sbjct: 101 SG-ANRVEFHHLSLYDVEQLPGEFNLINC--------------VGVLHHLP--------- 136

Query: 202 GLSHYRTIADGVSRHLNKDGL 222
                R I     + L   GL
Sbjct: 137 --DPIRGIQALAKK-LAPGGL 154


>gi|326791223|ref|YP_004309044.1| ribosomal protein L11 methyltransferase [Clostridium lentocellum
           DSM 5427]
 gi|326541987|gb|ADZ83846.1| ribosomal protein L11 methyltransferase [Clostridium lentocellum
           DSM 5427]
          Length = 322

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 41/160 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           +   ++LD+G G+G + +A L          VDI   +++IAK N + NG+   +F    
Sbjct: 177 KPDAKVLDMGCGSGILSIATLLLGAQ-HVTAVDIDQNSVDIAKDNFIQNGMKQGQFALHC 235

Query: 155 SDWFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            +  +         +G +DV+V+N   +  VI+                     G+    
Sbjct: 236 GNVIADEALVKIIGQGCYDVVVAN--IVADVII---------------------GMK--- 269

Query: 208 TIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLF 245
              + +   L   G       IG ++  +V    +S    
Sbjct: 270 ---ELLKDFLKPGGTLIASGIIG-DRSEEVKEHLKSVGFT 305


>gi|145347856|ref|XP_001418376.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578605|gb|ABO96669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 865

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 30/144 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LP IE++  +++LD  +G G +  A+  ++   +   +D    ALE AK N     
Sbjct: 706 LRSVLPTIERKSKLKVLDYCSGAGQIAAAVRAKAKKSRLWLLDADACALEAAKRN----- 760

Query: 146 VSERFDTLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +S+  + + SD + ++E     FD+I+SNPP    + VD +                   
Sbjct: 761 LSDDVEFILSDGWRALEKSDRAFDLILSNPPVHLGLAVDFVP------------------ 802

Query: 203 LSHYRTIADGVSRHL-NKDGLCSV 225
               R    G++R L   DG+   
Sbjct: 803 ---IREFLAGLARRLRRPDGIAYF 823


>gi|297835104|ref|XP_002885434.1| RNA methyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331274|gb|EFH61693.1| RNA methyltransferase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 559

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L L + + 
Sbjct: 361 RGLTFQISANSFFQTNTHQAEVLYKLIEESAGLKGDGSEVVLDLFCGTGTIGLTLARRAK 420

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A  NA  NG+ E    +Q D       F +     D+++S+P
Sbjct: 421 --HIYGYEVVPQAITDAHKNAQINGI-ENATFIQGDLNKIGEDFGNNFPKPDIVISDP 475


>gi|259907242|ref|YP_002647598.1| ribosomal RNA small subunit methyltransferase D [Erwinia pyrifoliae
           Ep1/96]
 gi|224962864|emb|CAX54340.1| ribosomal RNA small subunit methyltransferase D [Erwinia pyrifoliae
           Ep1/96]
 gi|283477053|emb|CAY72945.1| putative ribosomal RNA small subunit methyltransferase D [Erwinia
           pyrifoliae DSM 12163]
          Length = 375

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  +       I+DLG G G + L  L+++P  +   +D S  A+  ++ N  
Sbjct: 214 DVGARFFMQHLPDNIDGEIIDLGCGNGVIGLVALQQNPLAQVHFIDESYMAVASSRLNVE 273

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +   ++  +         ++ NPP+ +          V D          
Sbjct: 274 LNCPDDLARCEFRVNNALAGYPSDRLHAVLCNPPFHQ-------QNAVTDH--------- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 318 -----IAWQMFRDARRCLQYGGEL 336


>gi|149913718|ref|ZP_01902250.1| putative methyltransferase [Roseobacter sp. AzwK-3b]
 gi|149812002|gb|EDM71833.1| putative methyltransferase [Roseobacter sp. AzwK-3b]
          Length = 232

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 13/156 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F P   + L+V       +         ++LDLGTG+G +      +      V  D+  
Sbjct: 12  FWPSDYSGLIV----RHLMRHPGLLHGRQVLDLGTGSGILAGT-ALQLGAAGVVATDLDH 66

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            AL +A                Q   + +V  +  FD++++N P   +  ++        
Sbjct: 67  DALHLADDRLARIAPEASVQLCQGAMWEAVASDARFDLVLANLPNFPARQLESGTRAAFW 126

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   GG DG         G+ R L +      
Sbjct: 127 S------VGGADGRKVLDPFLLGLPRRLRQGASAVF 156


>gi|261886415|ref|ZP_06010454.1| methyltransferase small [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 231

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 9/125 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L ++        +DI      I + NA  N +           F S
Sbjct: 32  VLDVGCGCGILGLLLKRDFINLNLSSIDIQEINSTITQLNADVNNLVAAVICDDFSKFKS 91

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  FD IVSNPP+  S I       +       SL    D LS ++     V+ +L   
Sbjct: 92  -EIKFDFIVSNPPFYNSQITKSENEHISISRYSSSL----DPLSFFK----SVNANLKPQ 142

Query: 221 GLCSV 225
           G+   
Sbjct: 143 GVLYF 147


>gi|118474171|ref|YP_891813.1| methyltransferase small [Campylobacter fetus subsp. fetus 82-40]
 gi|118413397|gb|ABK81817.1| methyltransferase small [Campylobacter fetus subsp. fetus 82-40]
          Length = 231

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 9/125 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G + L L ++        +DI      I + NA  N +           F S
Sbjct: 32  VLDVGCGCGILGLLLKRDFINLNLSSIDIQEINSTITQLNADVNNLVAAVICDDFSKFKS 91

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            E  FD IVSNPP+  S I       +       SL    D LS ++     V+ +L   
Sbjct: 92  -EIKFDFIVSNPPFYNSQITKSENEHISISRYSSSL----DPLSFFK----SVNANLKPQ 142

Query: 221 GLCSV 225
           G+   
Sbjct: 143 GVLYF 147


>gi|22538105|ref|NP_688956.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           2603V/R]
 gi|25011994|ref|NP_736389.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           NEM316]
 gi|76799726|ref|ZP_00781820.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           18RS21]
 gi|77412885|ref|ZP_00789089.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           515]
 gi|38605304|sp|Q8DX85|PRMA_STRA5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|38605307|sp|Q8E307|PRMA_STRA3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|22535011|gb|AAN00829.1|AE014280_21 ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           2603V/R]
 gi|24413537|emb|CAD47615.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76584923|gb|EAO61587.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           18RS21]
 gi|77161025|gb|EAO72132.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           515]
          Length = 317

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPGTENIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    V+   DVIV+N                      ++             + D   
Sbjct: 228 GDLLKGVQQEVDVIVAN---------------------ILA--------DILIHLTDDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E    FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|290894232|ref|ZP_06557201.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J2-071]
 gi|290556229|gb|EFD89774.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J2-071]
          Length = 314

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N        V  L  E                   Y+      
Sbjct: 231 NNLLQDINKTNVDIVVAN----ILAEVILLFPE-----------------DVYKA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|225710904|gb|ACO11298.1| methyltransferase METT10D [Caligus rogercresseyi]
          Length = 436

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 58/137 (42%), Gaps = 10/137 (7%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + + ++L +    P    R    L +   L  +    ++R  +R LD+G G   +   L 
Sbjct: 61  FGLSMSLPTGALVPTLPLRFNYLLWIQDILELN----QRRTDIRGLDIGVGCSCIYPLLA 116

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSDWFSSVEGL-FDVIVSNPPY 174
                +  +G +   ++L+ A++N   N +S++   L  S +F ++     D  + NPP+
Sbjct: 117 ARHFNWSMLGFENHPESLKHAQANITQNQLSDKISVLSSSSFFRALGDTVLDFTMCNPPF 176

Query: 175 IESVIVDCLGLEVRDFD 191
            +S   +    E    +
Sbjct: 177 FDSNCYEAPQEERPGLE 193


>gi|119483858|ref|XP_001261832.1| methyltransferase, putative [Neosartorya fischeri NRRL 181]
 gi|119409988|gb|EAW19935.1| methyltransferase, putative [Neosartorya fischeri NRRL 181]
          Length = 351

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 44/141 (31%), Gaps = 37/141 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   L     ++  R+LD+GTGTG   +    E P  + +G D+S             +
Sbjct: 102 ILKGELHAAPIKNPRRVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPS 152

Query: 145 GV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  + RF+    +   S    FD       YI       L   +RD D           
Sbjct: 153 WIPPNCRFEIDDFELPWSYSQPFD-------YIHGRE---LEGAIRDHDN---------- 192

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +      +L   G  
Sbjct: 193 ------LFRQAYENLRPGGWL 207


>gi|114685147|ref|XP_001166965.1| PREDICTED: HpaII tiny fragments locus 9C isoform 3 [Pan
           troglodytes]
          Length = 567

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 30/154 (19%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +        L   +    +      +
Sbjct: 380 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQDWAQLDAGSTV 436

Query: 102 LDLGTGTGAVCLALLK---ESPFF-------------KGVGVDISCKALEIAKSNAVTNG 145
           LD+  GTG + LAL +    SP +             + +GV++  +A+E A+ NA  N 
Sbjct: 437 LDVCCGTGTIGLALARGPMYSPPWVGRHHAFLFQKVKRVIGVELCPEAVEDARVNAQDNE 496

Query: 146 VSE------RFDTLQSDWFSSVEGLFDVIVSNPP 173
           +S       R + L     S +     V + +PP
Sbjct: 497 LSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPP 530


>gi|121998286|ref|YP_001003073.1| cyclopropane-fatty-acyl-phospholipid synthase [Halorhodospira
           halophila SL1]
 gi|121589691|gb|ABM62271.1| Cyclopropane-fatty-acyl-phospholipid synthase [Halorhodospira
           halophila SL1]
          Length = 409

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 26/139 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  R   R+LD+G G G++ + L +     + VG+ +S +   +A+      GV
Sbjct: 159 AHIRHKLCLRPGDRVLDIGCGWGSMAIHLARH-EQVQVVGLTLSREQQRLAQERVRQAGV 217

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R +    D +  V G F+ IVS                V  F+          G+  Y
Sbjct: 218 ADRVEIRLQD-YRDVTGPFERIVS----------------VGMFE--------HVGVPFY 252

Query: 207 RTIADGVSRHLNKDGLCSV 225
            T  D + R L +DG+  V
Sbjct: 253 DTYFDTIRRLLTEDGVALV 271


>gi|86147887|ref|ZP_01066192.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222]
 gi|85834314|gb|EAQ52467.1| ribosomal protein L11 methyltransferase [Vibrio sp. MED222]
          Length = 295

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV+E+ +          EGL  
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALLASKDNAQRNGVAEQLEVFLPQ--DQPEGLLA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|332288379|ref|YP_004419231.1| 3-demethylubiquinone-9 3-methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330431275|gb|AEC16334.1| 3-demethylubiquinone-9 3-methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 247

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 35/146 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L + L      +  ++LD+G G G +  ++ K        G+D+S + L +AK +A  N 
Sbjct: 44  LNYILQHSNGLNGKKVLDVGCGGGILSESMAKS--GANVTGIDMSPQPLAVAKQHAQDNN 101

Query: 146 VSERF------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +   +      D LQ       E  FDVI                +E+ +  P       
Sbjct: 102 LIIDYQQSTIEDFLQQHQQLQAE-KFDVITC--------------MEMLEHVP------- 139

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D LS  R       + L  DG+  +
Sbjct: 140 -DPLSIIR----SCRQLLKPDGVLFM 160


>gi|260576660|ref|ZP_05844647.1| ribosomal L11 methyltransferase [Rhodobacter sp. SW2]
 gi|259021145|gb|EEW24454.1| ribosomal L11 methyltransferase [Rhodobacter sp. SW2]
          Length = 292

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 33/161 (20%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A     P    +  DI   A+++A +N   NG+  R D +++  
Sbjct: 149 PEKVADIGCGTAVLAMAAASVLPGALVIASDIDQVAVDVALANVAINGLQGRLDCVEAAG 208

Query: 158 FSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F          FD++ +N           L   + +  P ++     +GL          
Sbjct: 209 FGHPVLAEAAPFDLVFAN----------ILKGPLIELAPDMAAHVAKEGLVIL------- 251

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                  GL  V     Q   V   + +       + +D G
Sbjct: 252 ------SGLLVV-----QAEAVTAAYVAAGFVP-ESREDIG 280


>gi|227822632|ref|YP_002826604.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii
           NGR234]
 gi|254783311|sp|C3MEL0|PRMA_RHISN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|227341633|gb|ACP25851.1| ribosomal protein L11 methyltransferase [Sinorhizobium fredii
           NGR234]
          Length = 291

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 8/109 (7%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         R V  +LDLGTG+G + +A  K      G+  DI   A  +A  NA  NG
Sbjct: 140 LEMLACVARSRRVRNVLDLGTGSGVLAIAAWKLL-HVPGLATDIDPVATRVASDNARRNG 198

Query: 146 VSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           V +      +  F S      G FD++++N   I +  +  +  E+   
Sbjct: 199 VVDGLTFATAPGFHSTAFGTHGPFDLVIAN---ILARPLMKMAPELVAH 244


>gi|257076612|ref|ZP_05570973.1| ribosomal protein L11 methyltransferase [Ferroplasma acidarmanus
           fer1]
          Length = 204

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++DLGTGTG   +            G+DI    +EI++ NA     +   + + S  
Sbjct: 55  GKTVIDLGTGTGIFAIG-SCYLGASHATGIDIDPAMIEISRRNAEPFPCA---EFINSSI 110

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            S V G +D ++ NPP+   +  D +   ++  +
Sbjct: 111 -SEVHGNYDTVIMNPPFGSVIKHDDMPFIIKALE 143


>gi|254303806|ref|ZP_04971164.1| possible O-methyltransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323998|gb|EDK89248.1| possible O-methyltransferase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 243

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 30/199 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +           K++  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVSI-------KKNTKKILDLGTGNAAIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  G++I   +  +A  N   N ++E+   +  +  + ++    G FD ++SNPP+ + 
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKHFNIGSFDTVISNPPFFKI 126

Query: 178 VI-----VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                   +   L +   +  I+L            +    S  +   G   +     + 
Sbjct: 127 NENVNFLNNLEQLSIARHEVEINL----------EELIKIASELVKDRGYFYLVH---RA 173

Query: 233 VDVVRIFESRKLFLVNAFK 251
             +  I  S + +   A K
Sbjct: 174 DRLSEIMSSLQKYKFEAKK 192


>gi|327482706|gb|AEA86016.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 398

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGVAEKMTCVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDV++++PP       D                   +G + YR + 
Sbjct: 279 AFEAMKELKNAEERFDVVITDPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 ETAMRLLNKDGILV 335


>gi|262371754|ref|ZP_06065033.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           junii SH205]
 gi|262311779|gb|EEY92864.1| ribosomal RNA small subunit methyltransferase C [Acinetobacter
           junii SH205]
          Length = 341

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 50/144 (34%), Gaps = 22/144 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  LP +++    +I D G G G +   L K +P      +D+   AL+  K    
Sbjct: 180 DVGTAVLLPYLQEVKSGKIADFGCGAGVISAYLAKLNPEQHIFALDVDAFALQSTKFTFE 239

Query: 143 TNGVSERFDTLQS-DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            NG++     L+    FS      D IVSNPP+ + +  +                    
Sbjct: 240 QNGLNLENLNLEPVTGFSDAPQDLDAIVSNPPFHQGIHTN-------------------- 279

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                 T+      HL   G   +
Sbjct: 280 -YDASETLCRLAKSHLKSSGELWI 302


>gi|146284322|ref|YP_001174475.1| hypothetical protein PST_4010 [Pseudomonas stutzeri A1501]
 gi|145572527|gb|ABP81633.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 398

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGVAEKMTCVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDV++++PP       D                   +G + YR + 
Sbjct: 279 AFEAMKELKNAEERFDVVITDPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 ETAMRLLNKDGILV 335


>gi|320530529|ref|ZP_08031586.1| methyltransferase domain protein [Selenomonas artemidis F0399]
 gi|320137202|gb|EFW29127.1| methyltransferase domain protein [Selenomonas artemidis F0399]
          Length = 258

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 12/103 (11%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-------VDISCKA 133
           L+     + L  +       +LD+G G+GA+ +A  K+ P  K  G        D S   
Sbjct: 72  LMRRIHNYLLEHLAWNGKGTLLDVGCGSGALSIAAAKQFPAAKVQGIDAWGAMWDYSKDQ 131

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPY 174
            +    NA   GV  R   +  D          FD ++SN  Y
Sbjct: 132 CD---RNAEIEGVGARCTFMPGDAAKIDFPSKSFDAVISNFVY 171


>gi|313896841|ref|ZP_07830388.1| methyltransferase domain protein [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312974288|gb|EFR39756.1| methyltransferase domain protein [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 258

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 12/103 (11%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG-------VDISCKA 133
           L+     + L  +       +LD+G G+GA+ +A  K+ P  K  G        D S   
Sbjct: 72  LMRRIHNYLLEHLAWNGKGTLLDVGCGSGALSIAAAKQFPAAKVQGIDAWGAMWDYSKDQ 131

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPY 174
            +    NA   GV  R   +  D          FD ++SN  Y
Sbjct: 132 CD---RNAEIEGVGARCTFMPGDAAKIDFPSKSFDAVISNFVY 171


>gi|310779175|ref|YP_003967508.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Ilyobacter
           polytropus DSM 2926]
 gi|309748498|gb|ADO83160.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Ilyobacter
           polytropus DSM 2926]
          Length = 309

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 33/170 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     +    ++D+GTG+G + +A        +  GVDI   A+E  K N   N 
Sbjct: 160 LCLKLMEDYVKGGESVIDVGTGSGILMVA-ADRLEADEIWGVDIDELAVESTKENLELNR 218

Query: 146 VS-ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           VS E+    + +    V E  FDV+V+N                      ++        
Sbjct: 219 VSTEKSKVFKGNLLEIVKEKKFDVVVAN---------------------ILA-------- 249

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKD 252
                + D ++R + KDGL  +  I  ++  +V    +S    ++   KD
Sbjct: 250 DVILMLLDDMARVIKKDGLIILSGIIEDKVTEVEEKIKSAGFEILEVKKD 299


>gi|225027843|ref|ZP_03717035.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353]
 gi|224954790|gb|EEG35999.1| hypothetical protein EUBHAL_02103 [Eubacterium hallii DSM 3353]
          Length = 560

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +   YN+R  +S  +F    +T  L  +         + +     I DL TGTG +   L
Sbjct: 286 YEYLYNMRFKISPFSFF---QTNTLGAEVLYDKVREYVGETKDKLIYDLYTGTGTIAQML 342

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
              +   K VGV+I  +A+E AK NAV N + +  + +  D      ++    D++V +P
Sbjct: 343 ASVA--SKVVGVEIVEEAVEAAKKNAVDNHL-DNCEFIAGDVLKVVDNLTKKPDILVLDP 399

Query: 173 P 173
           P
Sbjct: 400 P 400


>gi|15607057|ref|NP_214439.1| ribosomal protein L11 methyltransferase [Aquifex aeolicus VF5]
 gi|38605117|sp|O67870|PRMA_AQUAE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|2984305|gb|AAC07828.1| ribosomal protein L11 methyltransferase [Aquifex aeolicus VF5]
          Length = 245

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 73/210 (34%), Gaps = 43/210 (20%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK------------RDVVRILDL 104
           W++ +   + +      P  +  ++V   LAF                   ++ + +LD+
Sbjct: 63  WKEKFK-PIEVEDFVIIPSWKKPVIVKPGLAFGTGLHPTTQLCIKALKKYLKEGMTVLDV 121

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG+G + +         + VG+DI  KA+   + NA  N V       +      V   
Sbjct: 122 GTGSGILAIVSALLGAK-RVVGIDIDEKAVNECRENAELNKVKVECFRAEP---KDVNES 177

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS---HYRTIADGVSRHLNKDG 221
           FD++V+N      + +      ++D  P+    G   GL      +   + +       G
Sbjct: 178 FDLVVAN------LEIHIFERVLKDILPKFKKIGIFSGLYKEKDLKRFEELL------GG 225

Query: 222 LCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
           L            V  +FE    + V   K
Sbjct: 226 L-----------KVKEVFEKENWYAVVVEK 244


>gi|300784476|ref|YP_003764767.1| rRNA/tRNA methylase [Amycolatopsis mediterranei U32]
 gi|299793990|gb|ADJ44365.1| rRNA/tRNA methylase [Amycolatopsis mediterranei U32]
          Length = 494

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 16/148 (10%)

Query: 76  PETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           PE  +L V  A    +    +R V  +LDLGTG G   L   + +   +    D+S +AL
Sbjct: 131 PEDHVLGVGHASLSLIRATSRRPVGTLLDLGTGNGVQALHATRHAE--RVTATDVSARAL 188

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            +A +    N +    + ++ +WF+ V    FD +V NPP++  V    +    R     
Sbjct: 189 ALAAATFRLNELD--VELVRGEWFAPVARRKFDQVVCNPPFV--VGPARVDYTYR----- 239

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDG 221
              D G+ G      +   +   LN  G
Sbjct: 240 ---DSGLAGDDASALVVRQLPGFLNDGG 264


>gi|293609472|ref|ZP_06691774.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827924|gb|EFF86287.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122735|gb|ADY82258.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 301

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE---TELLVDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   T + +D  LAF           L  + K DV
Sbjct: 100 WMDYYEPIQIGEKFWIVPEWLEP-PEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDV 158

Query: 99  VR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      +
Sbjct: 159 KDKIVIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLYVGLPE 217

Query: 157 WFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDG 198
            F         DV+V+N   I +  +  L  E  +    +   +L G
Sbjct: 218 EFDQEFKPKQADVLVAN---ILAGPLMMLAPEFANLIKSEGEFALAG 261


>gi|37523940|ref|NP_927317.1| hypothetical protein glr4371 [Gloeobacter violaceus PCC 7421]
 gi|35214946|dbj|BAC92312.1| glr4371 [Gloeobacter violaceus PCC 7421]
          Length = 281

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 17/174 (9%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ +   L +   R   RILDLG GTG+  + L +  P  +  G+D+S   L  A+  A 
Sbjct: 84  ETWVRDCLVKAVTRPPGRILDLGCGTGSTTVLLARAFPGARVTGLDLSADMLVAARLKAK 143

Query: 143 TNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              ++   + L  D  +S   E  FD++ ++         D +   V   +    L  G 
Sbjct: 144 REKLA--VEWLHGDARASGLPEASFDLVSASL-LFHETPPDEVP--VILAEMHRLLVPGG 198

Query: 201 DGLSHYRTIADGVSRHLNKDGLC--SVE---IGYNQKVDVVRIFESRKLFLVNA 249
             L     I DG    L +        E   IG     D+     +     V  
Sbjct: 199 QCL-----ILDGAQSTLRRVEWLGEIFEEPFIGAYAAGDLACDLAAAGFGAVRT 247


>gi|288904367|ref|YP_003429588.1| ribosomal protein L11 methyltransferase [Streptococcus gallolyticus
           UCN34]
 gi|306830399|ref|ZP_07463569.1| ribosomal protein L11 methyltransferase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325977363|ref|YP_004287079.1| ribosomal protein L11 methyltransferase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731092|emb|CBI12638.1| putative ribosomal protein L11 methyltransferase [Streptococcus
           gallolyticus UCN34]
 gi|304427424|gb|EFM30526.1| ribosomal protein L11 methyltransferase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325177291|emb|CBZ47335.1| ribosomal protein L11 methyltransferase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 317

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIDLNANTENIHVAT 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            +    V    DVIV+N
Sbjct: 228 GNLLQGVGIQADVIVAN 244


>gi|166363380|ref|YP_001655653.1| methyltransferase [Microcystis aeruginosa NIES-843]
 gi|166085753|dbj|BAG00461.1| methyltransferase [Microcystis aeruginosa NIES-843]
          Length = 219

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 40/166 (24%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQS 155
             R+LD+GTGT  + + + +  P ++ + +D++   LEI + N +     E+     +  
Sbjct: 42  NARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILNANCQEQIKLEKVDG 101

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    FD+++SN       ++  L                 + L   R I     R
Sbjct: 102 KNLPYQSEQFDLVISN------SLIHHL----------------ENPLPFLREI----KR 135

Query: 216 HLNKDGLCSV---------EIGYNQKVDVVRIFESRKLFLVNAFKD 252
            L  +G   +         EI   Q   V  I  +        FKD
Sbjct: 136 VLKPNGGIFLRDLFRPDSEEI--IQG-MVREIDPNFSPRQAQLFKD 178


>gi|329113330|ref|ZP_08242111.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001]
 gi|326697155|gb|EGE48815.1| tRNA (adenine-N(6)-)-methyltransferase [Acetobacter pomorum DM001]
          Length = 251

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 16/136 (11%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L++G G GA  L LL  +P  +G GV+       +A+ N V N   +    
Sbjct: 39  VPARKGQHVLEIGCGAGAGLLCLLHRAPTLQGTGVEKESDTATLAQQNMVANH-QQNIRI 97

Query: 153 LQ---SDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           L     D F       E  FD  ++NPP+   +         RD   R+       G   
Sbjct: 98  LNATFPDVFLEDNPLPEQYFDHCMANPPWHAPLGTASAHPR-RDLARRM-------GADT 149

Query: 206 YRTIADGVSRHLNKDG 221
             T   G +R L   G
Sbjct: 150 LPTWIAGAARILRHKG 165


>gi|308272551|emb|CBX29155.1| hypothetical protein N47_J01360 [uncultured Desulfobacterium sp.]
          Length = 388

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 45/128 (35%), Gaps = 24/128 (18%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE---RFD--TLQSD 156
           LD    +G   L + K     +    DIS  A+E++K NA+ NG+       D    +  
Sbjct: 220 LDCFCYSGGFALNMAKNC--CQVEAFDISKDAIELSKKNALLNGMENISFEVDNVFDRLK 277

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            + S +  FD IV +PP         +    R                 Y+ I     R 
Sbjct: 278 VYDSQKKKFDTIVLDPPAFAKSRAH-VQAAARG----------------YKEINFRALRM 320

Query: 217 LNKDGLCS 224
           LN  G+  
Sbjct: 321 LNPGGILI 328


>gi|261350337|ref|ZP_05975754.1| met-10+ protein [Methanobrevibacter smithii DSM 2374]
 gi|288861121|gb|EFC93419.1| met-10+ protein [Methanobrevibacter smithii DSM 2374]
          Length = 335

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L +    F PR         A          ++   ILD+  G G   + + K +   
Sbjct: 159 LKLNVEEVYFSPR--------LATERKRVSDSVKENENILDMFCGIGPFPVVIAKNN-NV 209

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               VDI+  A++    N   N +    + +  D      ++   +D I+ N P +    
Sbjct: 210 NITAVDINKNAIKYLNENIRLNKL-HNIEAICGDINEVSKNLNKKYDRIIMNLPGLAYEF 268

Query: 180 VDC 182
           +D 
Sbjct: 269 LDL 271


>gi|222445095|ref|ZP_03607610.1| hypothetical protein METSMIALI_00714 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434660|gb|EEE41825.1| hypothetical protein METSMIALI_00714 [Methanobrevibacter smithii
           DSM 2375]
          Length = 335

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L +    F PR         A          ++   ILD+  G G   + + K +   
Sbjct: 159 LKLNVEEVYFSPR--------LATERKRVSDSVKENENILDMFCGIGPFPVVIAKNN-NV 209

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               VDI+  A++    N   N +    + +  D      ++   +D I+ N P +    
Sbjct: 210 NITAVDINKNAIKYLNENIRLNKL-HNIEAICGDINEVSKNLNKKYDRIIMNLPGLAYEF 268

Query: 180 VDC 182
           +D 
Sbjct: 269 LDL 271


>gi|254474712|ref|ZP_05088098.1| ribosomal protein L11 methyltransferase [Ruegeria sp. R11]
 gi|214028955|gb|EEB69790.1| ribosomal protein L11 methyltransferase [Ruegeria sp. R11]
          Length = 290

 Score = 60.5 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 52/197 (26%)

Query: 73  EPRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    +     ++ D+G GT  + +A   
Sbjct: 109 VPADRIPLLIEAAMAFGTGHHGTTLGCLKALDKLITDGFVGHKVADIGCGTAVLAMA-AA 167

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPP 173
                + +  DI   A+E+A++N   N +    D +++  F +        FD+I +N  
Sbjct: 168 RVWDGQILASDIDQVAVEVAEANLKANDMEGAVDCMEAAGFDAPALAEAAPFDLIFAN-- 225

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQ 231
            I                P ++L             A  V+ HL  +G   +  G   +Q
Sbjct: 226 -ILKG-------------PLVAL-------------APDVAAHLRDEGYAIL-SGLLNDQ 257

Query: 232 KVDVVRIFESRKLFLVN 248
             +V+ ++    + LV 
Sbjct: 258 AEEVMTVYAQNGINLVE 274


>gi|307610649|emb|CBX00237.1| hypothetical protein LPW_19821 [Legionella pneumophila 130b]
          Length = 630

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             ILD+G G GA+  AL K  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSILDVGGGDGAIACALAKAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWF--SSVEGLFDVIV 169
            +R      D+         FD+I+
Sbjct: 506 QKRISVFAGDFINEEQFPTGFDLIL 530


>gi|304437371|ref|ZP_07397330.1| ribosomal protein L11 methyltransferase [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369627|gb|EFM23293.1| ribosomal protein L11 methyltransferase [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 317

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 47/210 (22%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKR-- 96
             I    +    R+ +     E  P  + +V              +  A  L  +E    
Sbjct: 115 AYI--HTEKVGRRIVVRPTWEEYTPLGDEIVIDLDPGAAFGTGAHATTAMCLRWLEHVVC 172

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             +R+ D+G G+G + +A   +    + + +D    A+ +A+ N   N V+     LQSD
Sbjct: 173 PGMRVYDVGCGSGILAIA-ASKLGAGEVIAMDYDPVAVSVAEENIKQNHVT-NVVALQSD 230

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +   G+                + +   +                     + D + +H
Sbjct: 231 LLAVCCGM-------------APAELITANIIA--------------DIIIRLFDQLDQH 263

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
           L + G+     I  ++  DV +  +     
Sbjct: 264 LARGGVLLASGIIDDRIDDVEQAAKEHGFT 293


>gi|170731925|ref|YP_001763872.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           MC0-3]
 gi|226710057|sp|B1JVC0|PRMA_BURCC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169815167|gb|ACA89750.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           MC0-3]
          Length = 300

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGANPVIGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +  EG FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPEGEFDIVVAN 234


>gi|89073737|ref|ZP_01160251.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium sp.
           SKA34]
 gi|89050512|gb|EAR56004.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium sp.
           SKA34]
          Length = 409

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 6/128 (4%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRIL 102
           K+ S H  LG   +R F +  +  SS  +  + +T           L  +++  +   +L
Sbjct: 134 KNISAHYDLGNDLYRHFLDPNMLYSSAIYLNKNDTLDQAQWNKMDRLCQKLKLTEDDHLL 193

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++GTG G + +   K     +     IS +    AK      G+S+R   L  D +  + 
Sbjct: 194 EIGTGWGGMAIHAAKYY-GCRVTTTTISEQQYLWAKERVEKEGLSDRITLLMDD-YRDLT 251

Query: 163 GLFDVIVS 170
           G +D +VS
Sbjct: 252 GQYDKLVS 259


>gi|316979450|gb|EFV62243.1| putative ribosomal protein L11 methyltransferase [Trichinella
           spiralis]
          Length = 218

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 10/106 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  +  + +              + DLG G+G + +A L +   +   G D+   AL++ 
Sbjct: 30  TAEVAATMIYTIDNHFNDLQGKVVADLGCGSGMLMIAALLQGADYCV-GFDVDFDALQLC 88

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL---------FDVIVSNPPY 174
           K N  +  ++E  D +Q D  +  +           FD ++ NPP+
Sbjct: 89  KRNVNSLQLTEYADFVQCDCTALFKKQQNNYYFSKAFDTVIMNPPF 134


>gi|29827985|ref|NP_822619.1| ribosomal RNA small subunit methyltransferase [Streptomyces
           avermitilis MA-4680]
 gi|81720927|sp|Q82N59|RLMG_STRAW RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|29605086|dbj|BAC69154.1| putative ribosomal RNA small subunit methyltransferase
           [Streptomyces avermitilis MA-4680]
          Length = 380

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 51/143 (35%), Gaps = 26/143 (18%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           LPR+   +  R++DLG G G V  A+    P  + + VD S +A+  A+     N     
Sbjct: 232 LPRVSGAE--RVVDLGCGNGVVGTAVALTEPEAEVLFVDESYQAVASARETFRAN-ADGT 288

Query: 150 FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            + L  D  S V     DV+++NPP+                             +    
Sbjct: 289 AEFLVGDGLSGVPAASVDVVLNNPPFHSHQATTD---------------------ATAWR 327

Query: 209 IADGVSRHLNKDGLCSVEIGYNQ 231
           +  G  R L   G   V IG   
Sbjct: 328 MFTGAKRALRPGGELWV-IGNRH 349


>gi|313497128|gb|ADR58494.1| Ribosomal RNA small subunit methyltransferase C [Pseudomonas putida
           BIRD-1]
          Length = 332

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   L +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            NG+    + +  D   +      +I+SNPP+
Sbjct: 237 ANGLEG--EVISGDGIDAAPTELSLILSNPPF 266


>gi|307822863|ref|ZP_07653094.1| rRNA (guanine-N(2)-)-methyltransferase [Methylobacter tundripaludum
           SV96]
 gi|307736467|gb|EFO07313.1| rRNA (guanine-N(2)-)-methyltransferase [Methylobacter tundripaludum
           SV96]
          Length = 387

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 46/139 (33%), Gaps = 24/139 (17%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTL 153
           ++D   I+DLG G G V L   +  P      VD S  A+  AK N     G        
Sbjct: 239 RQDACDIIDLGCGNGLVGLIAAERCPAATVHFVDESFMAVASAKDNFQRAFGEQREASFR 298

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             D    VE    D+I+ NPP+ +   V                     G     ++   
Sbjct: 299 VGDGLMGVESESADLILCNPPFHQQNTV---------------------GDQIAVSLFKQ 337

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
             R L K G   V IG   
Sbjct: 338 SRRVLRKGGELWV-IGNRH 355


>gi|26987497|ref|NP_742922.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida KT2440]
 gi|81840809|sp|Q88PT7|RSMC_PSEPK RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|24982163|gb|AAN66386.1|AE016266_8 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 332

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   L +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            NG+    + +  D   +      +I+SNPP+
Sbjct: 237 ANGLEG--EVISGDGIDAAPTELSLILSNPPF 266


>gi|113969514|ref|YP_733307.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-4]
 gi|113884198|gb|ABI38250.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp. MR-4]
          Length = 418

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 22/188 (11%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  +   P++   ++ A    L     R++ +    +L++
Sbjct: 141 HYDLGNALYEQFLDREMLYSSALY---PDSGASLEQAQLHKLKTICERLDLQPGQTLLEI 197

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   K           IS      AK+     G+S+    L  D + ++ G 
Sbjct: 198 GTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEREGLSDSITLLTED-YRNLGGT 255

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISLDGGIDGLSHYRTIADGVSR 215
           +D +VS    IE+V  + L    +  +    P       ++         YR   D + R
Sbjct: 256 YDRLVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQRYDSYRKGVDFIQR 314

Query: 216 HLNKDGLC 223
           ++   G  
Sbjct: 315 YIFPGGCL 322


>gi|323706445|ref|ZP_08118007.1| hypothetical protein CHP00095 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534230|gb|EGB24019.1| hypothetical protein CHP00095 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 391

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  + TG+  +  L          VDIS  AL++AK NA  NG  +R      + F  
Sbjct: 220 VLDCFSHTGSFSVHALHYGAKS-VETVDISEAALDMAKKNAALNGYLDRCRFTCENAFDL 278

Query: 161 VE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           ++        FDV++ +PP             V+D     ++ G       Y+ I     
Sbjct: 279 LKKYDEENKKFDVVILDPPAFTKSK-----ETVKD-----AIRG-------YKEINLRAM 321

Query: 215 RHLNKDGLCS 224
           + L K G   
Sbjct: 322 KILKKGGFLI 331


>gi|300768159|ref|ZP_07078064.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|300494223|gb|EFK29386.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
          Length = 323

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 51/191 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLV---DSAL----------------AFSLPRIEK 95
             W+ +Y+        T  P  E    V   +  L                   L  +E 
Sbjct: 119 TAWKKYYHPVRVTRYLTIVPSWEQYQPVQSGELVLRLDPGQAFGTGTHPTTKLCLQALET 178

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+  A++N   N V++     
Sbjct: 179 VINGGEHLIDVGTGSGVLSIA-AKAMGVGAVEAYDLDDVAVASAQTNLDLNPVAKDVHVA 237

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D  + ++   D+IV+N                      ++             +    
Sbjct: 238 ANDLLAGIDTQADIIVAN---------------------ILA--------EIIIPLVPQA 268

Query: 214 SRHLNKDGLCS 224
            ++L + G   
Sbjct: 269 RQNLKRGGYFI 279


>gi|225870080|ref|YP_002746027.1| hypothetical protein SEQ_0675 [Streptococcus equi subsp. equi 4047]
 gi|225699484|emb|CAW93016.1| conserved hypothetical protein [Streptococcus equi subsp. equi
           4047]
          Length = 255

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 66/171 (38%), Gaps = 21/171 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L    P++  R +  I+DL +G GAV L           V +++  +  ++ + + 
Sbjct: 33  IDSVLLSRFPKLPSRGL--IVDLCSGNGAVGL-FDSTQTKASIVEIELQPRLADMGQRSI 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPR 193
             N + ++   +  D  + ++ +     D+I+ NPPY +S       L         +  
Sbjct: 90  RLNQLEDQVTMICDDLTNLLQHVPRSGVDIILYNPPYFKSSQTSKKNLSEHYLLARHEIT 149

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
            +L            I       L  +G  ++    ++ ++++   +   L
Sbjct: 150 TNLA----------KICQIARHALKSNGRLAMVHRPDRFLEILDTLKINGL 190


>gi|182440567|ref|YP_001828286.1| putative ribosomal RNA small subunit methyltransferase
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|229470415|sp|B1VMX8|RLMG_STRGG RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|178469083|dbj|BAG23603.1| putative ribosomal RNA small subunit methyltransferase
           [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 384

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 56/150 (37%), Gaps = 27/150 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTL 153
           +   VR++DLG G G + L+    +P      VD S  A+  A+           + D L
Sbjct: 237 RSGAVRVVDLGCGNGVLGLSAAVANPDAHLTFVDESYGAVASAEETFRAGAPAGAKADFL 296

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             D  + ++ G  D++++NPP+                   ++        +  RT+  G
Sbjct: 297 VGDGLADLDPGSVDLVLNNPPFHS----------------HLATT-----DATARTMFAG 335

Query: 213 VSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
               L + G   V +G         + RIF
Sbjct: 336 AKTALRRGGELWV-VGNRHLSYHTHLRRIF 364


>gi|56461387|ref|YP_156668.1| ribosomal protein L11 methyltransferase [Idiomarina loihiensis
           L2TR]
 gi|81821667|sp|Q5QVT9|PRMA_IDILO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|56180397|gb|AAV83119.1| Ribosomal protein L11 methylase [Idiomarina loihiensis L2TR]
          Length = 293

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALA----------FSLPRIEKRDVV--RILDLGT 106
           +   L +       P+PE   +L+D  +A            L  I+        ++D G 
Sbjct: 108 FGENLWICPSWREIPKPEAVNILLDPGMAFGTGTHPTTAMCLRWIDANPPTGKTVVDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A          VG+DI  +AL   K NA  N V ++F           E   D
Sbjct: 168 GSGILGIA-ALLFKAEHVVGIDIDQQALIATKDNAERNKVGDKFSLYLPS--QQPETQVD 224

Query: 167 VIVSN 171
           ++++N
Sbjct: 225 LVLAN 229


>gi|33863741|ref|NP_895301.1| methyltransferase [Prochlorococcus marinus str. MIT 9313]
 gi|33635324|emb|CAE21649.1| possible methyltransferase [Prochlorococcus marinus str. MIT 9313]
          Length = 407

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 82  VDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           VD A A     + ++    + ++ILD G GTG     L   +P  + + VDIS  ALE+A
Sbjct: 43  VDMAYAVCTGSVVRKCAGSEPLKILDAGCGTGVSTDYLAHLNPGAEILAVDISLGALEVA 102

Query: 138 KSNAVTNGVSERFDTL---QSDWFSSVEGLFDVIVS 170
           +     +G +++       QS      EG FD I S
Sbjct: 103 RERLQRSGGNDQAHVRIENQSLLELEDEGQFDYINS 138


>gi|330883391|gb|EGH17540.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 190

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 23  KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 81

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 82  VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 124

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 125 EQAMRLLSKDGILV 138


>gi|254502058|ref|ZP_05114209.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11]
 gi|222438129|gb|EEE44808.1| Methyltransferase domain family [Labrenzia alexandrii DFL-11]
          Length = 207

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 33/60 (55%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+LG GTG   +A  K  P  +  G+DIS + LE A++N    G+S+R   ++ D    
Sbjct: 38  VLELGCGTGRNLIAAAKRYPKARFYGLDISEQMLETARANIEKAGLSDRIILVRGDASDP 97


>gi|311695157|gb|ADP98030.1| rRNA (guanine-N(2)-)-methyltransferase [marine bacterium HP15]
          Length = 348

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 28/126 (22%)

Query: 101 ILDLGTGTGAVCLALLKE-----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +LD   G G +   L +       P     G+D+  +A+  A++    NGVS R   + S
Sbjct: 205 VLDFACGAGVLGAWLHRWQERQGLPRLTIDGIDVQSQAVICARATYERNGVSGRI--MAS 262

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    VEG + VI+SNPP+   V  D                     LS        V R
Sbjct: 263 DGLPGVEGSWPVILSNPPFHSGVRTD---------------------LSMTERFLREVVR 301

Query: 216 HLNKDG 221
           HL   G
Sbjct: 302 HLAPGG 307


>gi|300710969|ref|YP_003736783.1| protein-L-isoaspartate O-methyltransferase [Halalkalicoccus
           jeotgali B3]
 gi|299124652|gb|ADJ14991.1| protein-L-isoaspartate O-methyltransferase [Halalkalicoccus
           jeotgali B3]
          Length = 204

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSE 148
           +   +      +LDLG GTGA+ LAL    P   + VG DIS   +E A+  A   G+  
Sbjct: 36  IEHADPGPEETVLDLGCGTGAIALALA---PDAGRVVGRDISEGMMERAREKAAERGL-N 91

Query: 149 RFDTLQSDWFSS-VEGLFDVIVSN 171
             +  +  + +   +G  D++ SN
Sbjct: 92  NVEFGEGRFRAPNYDGPVDIVTSN 115


>gi|284050233|ref|ZP_06380443.1| methyltransferase, UbiE/COQ5 family protein [Arthrospira platensis
           str. Paraca]
 gi|291566565|dbj|BAI88837.1| putative methyltransferase [Arthrospira platensis NIES-39]
          Length = 203

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 43/171 (25%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W  FY+  L            T +   +     L   E  +   ILD+G GTG +   L 
Sbjct: 16  WAPFYDFLL------------TTVFYQAVHKRLLEFAEFPNSANILDIGCGTGRLLQRLA 63

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPY 174
           K+ P  +G G D+S + ++ AK+    N   +R   LQ +       E  FD +      
Sbjct: 64  KQFPDLEGTGFDLSPQMIKEAKN---KNIYGDRLQFLQGNVEALPFPESSFDAVFC---- 116

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                +     E+                     +   + R L   G+  +
Sbjct: 117 -TISFLHYPHPEL---------------------VLAEIKRVLRPGGVFYL 145


>gi|255540057|ref|XP_002511093.1| Magnesium-protoporphyrin O-methyltransferase, putative [Ricinus
           communis]
 gi|223550208|gb|EEF51695.1| Magnesium-protoporphyrin O-methyltransferase, putative [Ricinus
           communis]
          Length = 315

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 52/161 (32%), Gaps = 18/161 (11%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+  Y     ++    + R      V++ L         + V  + D G GTG++ + L 
Sbjct: 108 WKKIYGETDDVNKVQRDIRLGHSKTVENVLKMLKDEGSLKGVT-VCDAGCGTGSLSIPLA 166

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP--PY 174
           KE      +  DIS   +  A+ NA            +     S++G +D +V      +
Sbjct: 167 KE--GAIVLASDISAAMVSEAEKNAKEQLGENVLPKFEVKDLESLDGKYDTVVCLDVLIH 224

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 D +          ++L          R I     +
Sbjct: 225 YPQTKADGMIA-------HLALLAEN------RLILSFAPK 252


>gi|241205537|ref|YP_002976633.1| ribosomal protein L11 methyltransferase [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240859427|gb|ACS57094.1| ribosomal L11 methyltransferase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 292

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 41/173 (23%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ K       +  DI   A ++A  N   NG
Sbjct: 140 LEVIDAVVRSRLVRNALDLGTGSGVLAIAVRKLR-NIPVLATDIDPIATKVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S     +G FD+I++N                              
Sbjct: 199 IASGIVTRTAPGFHSTAFSEQGPFDLIIAN------------------------------ 228

Query: 202 GLSHYRTIADGVSR---HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                R +     +   HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 229 --ILARPLIRMAPKLATHLAPGGSVILSGILAGQRWKVIAAYSGARLRHVRTI 279


>gi|119482041|ref|XP_001261049.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
 gi|119409203|gb|EAW19152.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
          Length = 331

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 46/136 (33%), Gaps = 31/136 (22%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +  P +      RILD+GTGTG   L +  + P  + VG D+S       + N      +
Sbjct: 84  YRAPILNDGPPKRILDVGTGTGIWPLEMADDFPDAEIVGTDLSPI-----QPNWAPPNCT 138

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
              D  +SDW  +    FD       YI +  +                 GG  G+  + 
Sbjct: 139 FNVDDAESDWTFTPAEAFD-------YIHARSL-----------------GG--GIGDWN 172

Query: 208 TIADGVSRHLNKDGLC 223
                  RH    G  
Sbjct: 173 RFLRQAYRHTKPGGWV 188


>gi|77359314|ref|YP_338889.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|123588623|sp|Q3IIC0|PRMA_PSEHT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|76874225|emb|CAI85446.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 293

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 31/176 (17%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE------SIHRILGWRDFYNVRLTLSS 69
            + S   +++ D  +     + +     +  + E       I         +  RL +  
Sbjct: 65  DMDSVVALLNADKSVAQNLTYKIEQLEDKDWEREWMDNFHPIQ--------FGKRLWICP 116

Query: 70  DTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGTGTGAVCLAL 115
                P P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A 
Sbjct: 117 SWRDIPDPDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAA 176

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           +K     + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N
Sbjct: 177 IKLGAE-RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN 229


>gi|218509181|ref|ZP_03507059.1| ribosomal protein L11 methyltransferase [Rhizobium etli Brasil 5]
          Length = 211

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 59  LEVIDRVVRSRRVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATRVAAENIRRNG 117

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N   +   ++                     
Sbjct: 118 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN--ILARPLI--------------------- 154

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  ++ HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 155 ------RMAPQLAAHLAPGGTVILSGILAAQRWKVIAAYSGARLRHVRTI 198


>gi|21905459|gb|AAM80317.1| putative methyltransferase [Streptococcus pyogenes MGAS315]
          Length = 260

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 113 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 170

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 171 GDLLKEVSQEADVIVAN 187


>gi|28896622|ref|NP_802972.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           SSI-1]
 gi|161485734|ref|NP_665514.2| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS315]
 gi|38605333|sp|Q8K5Q9|PRMA_STRP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|28811876|dbj|BAC64805.1| putative methyltransferase [Streptococcus pyogenes SSI-1]
          Length = 317

 Score = 60.5 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKEVSQEADVIVAN 244


>gi|229002424|ref|ZP_04160533.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
 gi|228758619|gb|EEM07751.1| Methyltransferase type 11 [Bacillus mycoides Rock3-17]
          Length = 207

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 41/206 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   LS   ++                + ++      +ILD+GTG+G++ + L K  P
Sbjct: 1   MYIAFILSYSVYQFAAFGGNYQSKIHDLIVAKVNWVGKGKILDIGTGSGSLIIKLAKTFP 60

Query: 121 FFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
                G        + S       + NA   GVS+R D L++        +  FD+IVS 
Sbjct: 61  KPFLTGIDYWGGNWEYSK---AQCQQNAEIEGVSDRVDFLKASAAELPFNDDEFDIIVSC 117

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------ 225
             +           EV+D + +               +     R L   G          
Sbjct: 118 LTF----------HEVKDRENKT-------------EVIKEALRVLKPGGEFVFLDLFMD 154

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFK 251
           E  +  + +++ + +   +  +N++K
Sbjct: 155 EKIFGDEKELLNVLKKHGVSELNSYK 180


>gi|225431251|ref|XP_002267827.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 383

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   + +   +    +L++G GTG + L LL+ +   + V V++  + +EI +     +
Sbjct: 62  VLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEH 119

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G+ ++   +  D   +    FD++V+N PY
Sbjct: 120 GLEDQLTVICKDALKTDFPQFDLVVANIPY 149


>gi|242072009|ref|XP_002451281.1| hypothetical protein SORBIDRAFT_05g026900 [Sorghum bicolor]
 gi|241937124|gb|EES10269.1| hypothetical protein SORBIDRAFT_05g026900 [Sorghum bicolor]
          Length = 872

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 27/168 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +  +T S   F+   E+        L   + + +      +LD+G G G++ + L+K 
Sbjct: 603 FLDPTMTYSCGIFKVEDESLEAAQLRKLDNLINKAKVEPGHHVLDIGCGWGSLAIRLVKR 662

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIES 177
           +   K  G+ +S + L+  K      G+ +R   L  D+     G  FD I+S       
Sbjct: 663 T-GCKCTGITLSEEQLKYGKRKVKEFGLEDRITLLLCDYRQIANGQKFDRIIS------- 714

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               C  LE    +              Y         HL + GL  +
Sbjct: 715 ----CGMLEHVGHE-------------FYEDFFASCEYHLAEHGLLVL 745


>gi|158426102|ref|YP_001527394.1| ribosomal protein L11 methyltransferase [Azorhizobium caulinodans
           ORS 571]
 gi|158332991|dbj|BAF90476.1| ribosomal protein L11 methyltransferase [Azorhizobium caulinodans
           ORS 571]
          Length = 331

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 40/147 (27%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA      +     RILD+GTGTG + +A  ++      V  D+   A++ A+ NA  NG
Sbjct: 169 LAAIADMAKLGTPRRILDVGTGTGVLAIAAARQFRRP-VVASDLDDVAVKTARENARFNG 227

Query: 146 VSERFDTLQSDWFSSVEGL----FDVIVSN---PPYIESVIVDCLGLEVRDFDPRISLDG 198
                    +    ++       +D+I++N   PP                         
Sbjct: 228 AGPFVTLHLAAGVDAMSVKAGAPYDLILANILLPP------------------------- 262

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + +A  V   L   G   +
Sbjct: 263 -------LKRLARPVRPLLAPGGWLVL 282


>gi|301632306|ref|XP_002945230.1| PREDICTED: hypothetical protein LOC100498143 [Xenopus (Silurana)
           tropicalis]
          Length = 1123

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     +  + R+LD G G+G + +   K         VDI   A+   + NA  NGV  
Sbjct: 437 ARQGGAQEGLGRVLDYGCGSGILAIGAAKHGA-VDIDAVDIDPAAVASTRLNAQANGVQ- 494

Query: 149 RFDTLQSDWFSSVEGLFDVIVSN 171
               L +      +GL+  +++N
Sbjct: 495 ----LHAGLPEQAQGLYQTVLAN 513


>gi|160902765|ref|YP_001568346.1| methyltransferase small [Petrotoga mobilis SJ95]
 gi|160360409|gb|ABX32023.1| methyltransferase small [Petrotoga mobilis SJ95]
          Length = 232

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 23/203 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + +++L  ++    P   + LL        L     ++   I++LG+G G V L + K  
Sbjct: 14  YRSLKLKTANKHHLPTHASVLL--------LATHPAKNNSTIVELGSGIGHVSLVIGKML 65

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPY 174
              K +G++I  +  E +  N   N +    + L ++   +V+  F     D I+SNPP+
Sbjct: 66  TNSKIIGIEIQKELYEYSLQNKEINEI-NNVEFLNTEV-KNVKNYFDAESIDYIISNPPH 123

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
               +   +       D +I+       L             L   GL    I      D
Sbjct: 124 YFDGLKSQIS------DRKIARSAED--LKVLEDFIYASKYLLKNKGLGCFIIHPYVLSD 175

Query: 235 VVRIFESRKLFLVNAFKDYGGND 257
           V+ I E   L   + +  YG  +
Sbjct: 176 VLIILEKNNLEPQHIYIAYGNKE 198


>gi|77165697|ref|YP_344222.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
 gi|254434045|ref|ZP_05047553.1| methyltransferase, UbiE/COQ5 family [Nitrosococcus oceani AFC27]
 gi|76884011|gb|ABA58692.1| UbiE/COQ5 methyltransferase [Nitrosococcus oceani ATCC 19707]
 gi|207090378|gb|EDZ67649.1| methyltransferase, UbiE/COQ5 family [Nitrosococcus oceani AFC27]
          Length = 232

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      +  +   +  RILDL  GTG   LA+    P  + VGV++  + L+IA+   
Sbjct: 34  IDRLWKRRMVNLMPPNASRILDLACGTGISTLAIASRYPGCQVVGVELREEYLKIARQKV 93

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G+      L        E  FD I S+  Y+                          
Sbjct: 94  QRLGLKNIELVLSRAEDYRSEEPFDCISSS--YLAK------------------------ 127

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +  R++       L + GL  +
Sbjct: 128 -YAELRSLTHNNKAMLKEGGLLLM 150


>gi|84501641|ref|ZP_00999813.1| ribosomal protein L11 methyltransferase, putative [Oceanicola
           batsensis HTCC2597]
 gi|84390262|gb|EAQ02821.1| ribosomal protein L11 methyltransferase, putative [Oceanicola
           batsensis HTCC2597]
          Length = 290

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 44/193 (22%)

Query: 73  EPRPETELLVDSALAF-------------SLPRIEKRDVV--RILDLGTGTGAVCLALLK 117
            P     LL+++A+AF             +L R+  R VV   + D+G GT  + +A  +
Sbjct: 109 VPEDAVPLLIEAAMAFGTGHHGTTRGCLEALDRLADRGVVAGSVADIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P    V  DI   A+E+A++N   N ++ R   +++  F         I +  PY + 
Sbjct: 169 IWP-VTPVASDIDPVAVEVAEANLAANDMAGRVVCIEATGFDH-----PRIAAGAPY-DL 221

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG--YNQKVDV 235
           +  + L   + D  P ++                   RHL   G   +  G   +Q  +V
Sbjct: 222 IFANILKGPLIDLAPDLA-------------------RHLAPGGHAIL-SGLLNDQADEV 261

Query: 236 VRIFESRKLFLVN 248
              + ++ L    
Sbjct: 262 ADAYAAQGLDRAE 274


>gi|117919620|ref|YP_868812.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
           ANA-3]
 gi|117611952|gb|ABK47406.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella sp.
           ANA-3]
          Length = 418

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 22/188 (11%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  +   P++E  ++ A    L     R++ +    +L++
Sbjct: 141 HYDLGNALYEQFLDREMLYSSALY---PDSEASLEQAQLHKLKTICERLDLQPGQTLLEI 197

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   K           IS      AK+     G+S+    L  D + ++ G 
Sbjct: 198 GTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVEREGLSDSITLLTED-YRNLGGT 255

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISLDGGIDGLSHYRTIADGVSR 215
           +D +VS    IE+V  + L    +  +    P       ++         YR   D + R
Sbjct: 256 YDRLVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAITIADQRYDSYRKGVDFIQR 314

Query: 216 HLNKDGLC 223
           ++   G  
Sbjct: 315 YIFPGGCL 322


>gi|238026174|ref|YP_002910405.1| ribosomal protein L11 methyltransferase [Burkholderia glumae BGR1]
 gi|237875368|gb|ACR27701.1| Ribosomal protein L11 methyltransferase [Burkholderia glumae BGR1]
          Length = 300

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + + L K+    + +G+DI  +A+E A+ N+  N    R +         
Sbjct: 169 VLDYGCGSGILAI-LAKKCGAGRVIGIDIDPQAVESARHNSERN----RAEVDYGLPDDC 223

Query: 161 VEGLFDVIVSN 171
             G FD++V+N
Sbjct: 224 PPGEFDIVVAN 234


>gi|163794459|ref|ZP_02188430.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199]
 gi|159180183|gb|EDP64706.1| Ribosomal protein L11 methylase [alpha proteobacterium BAL199]
          Length = 292

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 34/156 (21%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-DWFS 159
           +LDLG G+G + +A  K  P  + V VD+   ++  A  NA  NG + R  T  S  W +
Sbjct: 154 VLDLGCGSGILAMATAKLVPSSRIVAVDLDPPSVTTAAENARLNGTATRIRTAVSRGWRA 213

Query: 160 SVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +      +D++++N   I +  +  +  ++             +G              
Sbjct: 214 PLVRRTAPYDLVLAN---ILAGPLCAMAPDL------------ANG-------------- 244

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
           L   G   +  + Y+Q+  V+     + L L++ ++
Sbjct: 245 LAPGGRAILSGLMYDQETRVLAAHRVQGLRLLSRYR 280


>gi|221135094|ref|ZP_03561397.1| Cyclopropane-fatty-acyl-phospholipid synthase [Glaciecola sp.
           HTCC2999]
          Length = 418

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 30/201 (14%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTF-EPRPETELLVDS 84
            ++  Q FF  N++ ++ K+   H  LG   +  F +  +  S+  +  P  +      +
Sbjct: 120 PINKIQHFFNRNSVAQARKNIQAHYDLGNQLYTHFLDESMMYSAAVYPHPEADLAEAQQN 179

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L     +++ +    ++++GTG G + +   K           IS +    A+      
Sbjct: 180 KLKEICEKLQLKPTDHLMEIGTGWGGLAVYAAKHY-GCHVTTTTISDEQYAWAQEWVAKE 238

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           G+ ++   L+ D + ++EG +D +VS         ++ +    + +              
Sbjct: 239 GLEDKITLLKQD-YRTLEGTYDKLVS---------IEMIEAVGKSY-------------- 274

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
             R   +  +  L  +GL  +
Sbjct: 275 -LRNFFEKCTSLLKPEGLMVL 294


>gi|306832637|ref|ZP_07465776.1| ribosomal protein L11 methyltransferase [Streptococcus bovis ATCC
           700338]
 gi|304425245|gb|EFM28372.1| ribosomal protein L11 methyltransferase [Streptococcus bovis ATCC
           700338]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIDLNANTENIHVAT 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            +    V    DVIV+N
Sbjct: 228 GNLLQGVGIQADVIVAN 244


>gi|304396992|ref|ZP_07378872.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB]
 gi|304355788|gb|EFM20155.1| ribosomal protein L11 methyltransferase [Pantoea sp. aB]
          Length = 293

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVS+R       
Sbjct: 158 DGKTVIDFGCGSGILAIA-ALKLGAAQAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPH 216

Query: 157 WFSSVEGLFDVIVSN 171
                    DV+V+N
Sbjct: 217 Q-QPDNLQADVVVAN 230


>gi|238789448|ref|ZP_04633233.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia frederiksenii ATCC 33641]
 gi|238722398|gb|EEQ14053.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia frederiksenii ATCC 33641]
          Length = 182

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+E      ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 4   EAVRVLALERLELPGASHLIDVGAGTGSVALEAALRFPHLRVTAIERNPAALELITENRQ 63

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G       +       +    D I                             GG  G
Sbjct: 64  RLGC-HNVAIIAGTAPLPLADKADAI---------------------------FIGGSGG 95

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 96  --HLAELIDWALMTLNPGGRLVL 116


>gi|196010417|ref|XP_002115073.1| hypothetical protein TRIADDRAFT_28751 [Trichoplax adhaerens]
 gi|190582456|gb|EDV22529.1| hypothetical protein TRIADDRAFT_28751 [Trichoplax adhaerens]
          Length = 294

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +N+ + L  D   P     L     L   +      D+  I D+GTG   +   L     
Sbjct: 58  FNLHVELPMDRLIPTVPLRLNYIHWLEDLIQTTHNDDIFGI-DIGTGASCIYPLLAARMN 116

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERF--------DTLQSDWFSSVEGLFDVIVSNP 172
            +  +  ++  + +  A+ N   N + E+         D L +   +     +D  + NP
Sbjct: 117 GWNFLATEVDQRCVHYAQKNVTINDLDEKIKIKMVAAQDILCTPLRNENRQQYDFCMCNP 176

Query: 173 PYI 175
           P+ 
Sbjct: 177 PFF 179


>gi|195024980|ref|XP_001985976.1| GH21111 [Drosophila grimshawi]
 gi|193901976|gb|EDW00843.1| GH21111 [Drosophila grimshawi]
          Length = 302

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 59/147 (40%), Gaps = 21/147 (14%)

Query: 59  DFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +++ +++  +  +  P    R    L ++  LA      +K D VR +D+G G+  +   
Sbjct: 65  EYFGLQVDFAPGSLVPTLALRLNYILWLEDLLAP-----QKLDAVRGIDIGCGSSCIYSL 119

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--------SDWFS----SVE 162
           L  +   ++ + ++     +E A+ N   N +    +           S +F     + +
Sbjct: 120 LGAKKNMWQMLALESKQTNIEYARQNVARNELQSLIEVYAQPDKQSIFSSYFESESAATK 179

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRD 189
             F   + NPP+ +S   +  G   R+
Sbjct: 180 ANFHFCLCNPPFFDSNAANPFGGNTRN 206


>gi|121608462|ref|YP_996269.1| ribosomal protein L11 methyltransferase [Verminephrobacter eiseniae
           EF01-2]
 gi|121553102|gb|ABM57251.1| LSU ribosomal protein L11P methyltransferase [Verminephrobacter
           eiseniae EF01-2]
          Length = 307

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 41/132 (31%), Gaps = 35/132 (26%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E + + R+LD G G+G + LA  K         VDI   A++    NA  N V      L
Sbjct: 173 EGQPLGRVLDYGCGSGILALAAAK-FGARDVDAVDIDPAAVQATARNAQANAVQ-----L 226

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +       G +  +++N                                   R +A  +
Sbjct: 227 HAGLPEQARGEYQTVLANILATP-----------------------------LRVLAPLL 257

Query: 214 SRHLNKDGLCSV 225
             HL   G   +
Sbjct: 258 CGHLAPGGRLVL 269


>gi|239831322|ref|ZP_04679651.1| cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823589|gb|EEQ95157.1| cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           intermedium LMG 3301]
          Length = 429

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 153 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 211

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + +++  FD +VS                V  F+ 
Sbjct: 212 QHAIANQRARDEGLADRAKFELTD-YRNIDDKFDRLVS----------------VGMFE- 253

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 254 -------HVGVGHFAEYFQHVARLMKPDGVFLL 279


>gi|229008418|ref|ZP_04165879.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
 gi|228752855|gb|EEM02423.1| Methyltransferase type 11 [Bacillus mycoides Rock1-4]
          Length = 211

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 41/206 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   LS   ++                + ++      +ILD+GTG+G++ + L K  P
Sbjct: 1   MYIAFILSYSVYQFAAFGGNYQSKIHDLIVAKVNWIGKGKILDIGTGSGSLIIKLAKTFP 60

Query: 121 FFKGVG-------VDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
                G        + S       + NA   GVS+R D L++        +  FD+IVS 
Sbjct: 61  KPFLTGIDYWGGNWEYSK---AQCQQNAEIEGVSDRVDFLKASAAELPFNDDEFDIIVSC 117

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------ 225
             +           EV+D + +               +     R L   G          
Sbjct: 118 LTF----------HEVKDRENKT-------------EVIKEALRVLKPGGEFVFLDLFMD 154

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFK 251
           E  +  + +++ + +   +  +N++K
Sbjct: 155 EKIFGDEKELLNVLKKHGVSELNSYK 180


>gi|19704117|ref|NP_603679.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|296328675|ref|ZP_06871192.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|19714323|gb|AAL94978.1| Methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|296154274|gb|EFG95075.1| methyltransferase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 243

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 80/192 (41%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +           K+++ +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVNI-------KKNIKKILDLGTGNAAIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            K  G++I   +  +A  N   N ++E+   +  +  + ++    G FD+++SNPP+ + 
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFDIGSFDIVISNPPFFKI 126

Query: 178 VI-----VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                   +   L +   +  I+L            +    S  +   G   +    ++ 
Sbjct: 127 NENINFLNNLDQLSIARHEIEINL----------EELTKIASELVKDRGYFYLVHRADRL 176

Query: 233 VDVVRIFESRKL 244
            +++   +    
Sbjct: 177 SEIINNLQKYNF 188


>gi|327483827|gb|AEA78234.1| S-adenosyl-L-methionine dependent methyltransferase,
           cyclopropane-fatty-acyl-phospholipid-like protein
           synthase [Vibrio cholerae LMA3894-4]
          Length = 413

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 244 LNNQITLLKQD-YRLLSGQYDKLVS 267


>gi|229505283|ref|ZP_04394793.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae BX
           330286]
 gi|229511047|ref|ZP_04400526.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
 gi|229518167|ref|ZP_04407611.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae RC9]
 gi|229608302|ref|YP_002878950.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MJ-1236]
 gi|229344882|gb|EEO09856.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae RC9]
 gi|229351012|gb|EEO15953.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
 gi|229357506|gb|EEO22423.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae BX
           330286]
 gi|229370957|gb|ACQ61380.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MJ-1236]
          Length = 428

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 200 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 258

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 259 LNNQITLLKQD-YRLLSGQYDKLVS 282


>gi|229525733|ref|ZP_04415138.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae bv.
           albensis VL426]
 gi|229339314|gb|EEO04331.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae bv.
           albensis VL426]
          Length = 428

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 200 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 258

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 259 LNNQITLLKQD-YRLLSGQYDKLVS 282


>gi|229529789|ref|ZP_04419179.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           12129(1)]
 gi|229333563|gb|EEN99049.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           12129(1)]
          Length = 428

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 200 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 258

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 259 LNNQITLLKQD-YRLLSGQYDKLVS 282


>gi|168028766|ref|XP_001766898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681877|gb|EDQ68300.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 492

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 11/127 (8%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             I        +   +S+++F     ++  V          ++      +LDL  GTG +
Sbjct: 292 AYIT--ERLRGLVFEISANSFFQTNTSQAEVLYQKVEEQCALKGDGSEVLLDLFCGTGTI 349

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLF 165
            L++ K        G ++  +A+  A+ NA  NG+      +Q D       F       
Sbjct: 350 GLSMAKRVK--HVYGYELVQEAVVDARRNAARNGIQ-NATFIQGDLNKLTDEFGKDFPRP 406

Query: 166 DVIVSNP 172
           DV++++P
Sbjct: 407 DVVITDP 413


>gi|254291546|ref|ZP_04962336.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           AM-19226]
 gi|150422498|gb|EDN14455.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           AM-19226]
          Length = 432

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 204 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 262

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 263 LNNQITLLKQD-YRLLSGQYDKLVS 286


>gi|153826009|ref|ZP_01978676.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MZO-2]
 gi|149740229|gb|EDM54376.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MZO-2]
          Length = 432

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 204 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 262

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 263 LNNQITLLKQD-YRLLSGQYDKLVS 286


>gi|153214213|ref|ZP_01949248.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           1587]
 gi|153802709|ref|ZP_01957295.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MZO-3]
 gi|297578724|ref|ZP_06940652.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           RC385]
 gi|124115462|gb|EAY34282.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           1587]
 gi|124121749|gb|EAY40492.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MZO-3]
 gi|297536318|gb|EFH75151.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           RC385]
          Length = 432

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 204 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 262

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 263 LNNQITLLKQD-YRLLSGQYDKLVS 286


>gi|15641135|ref|NP_230767.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587416|ref|ZP_01677185.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           2740-80]
 gi|121726261|ref|ZP_01679551.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V52]
 gi|147674745|ref|YP_001216590.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           O395]
 gi|153816916|ref|ZP_01969583.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae NCTC
           8457]
 gi|153821994|ref|ZP_01974661.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
 gi|227081295|ref|YP_002809846.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           M66-2]
 gi|254848251|ref|ZP_05237601.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MO10]
 gi|298498773|ref|ZP_07008580.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae MAK
           757]
 gi|9655593|gb|AAF94281.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121548336|gb|EAX58400.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           2740-80]
 gi|121631207|gb|EAX63580.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V52]
 gi|126512503|gb|EAZ75097.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae NCTC
           8457]
 gi|126520459|gb|EAZ77682.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae B33]
 gi|146316628|gb|ABQ21167.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           O395]
 gi|227009183|gb|ACP05395.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           M66-2]
 gi|227012937|gb|ACP09147.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           O395]
 gi|254843956|gb|EET22370.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           MO10]
 gi|297543106|gb|EFH79156.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae MAK
           757]
          Length = 432

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 204 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 262

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 263 LNNQITLLKQD-YRLLSGQYDKLVS 286


>gi|169762756|ref|XP_001727278.1| UMTA methyltransferase family protein [Aspergillus oryzae RIB40]
 gi|83770306|dbj|BAE60439.1| unnamed protein product [Aspergillus oryzae]
          Length = 342

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 34/149 (22%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LL+  AL  + P  + +   RILD+GTGTG   + + ++ P  + VG D+S       +
Sbjct: 76  KLLLGGALYRA-PIEQAQTPQRILDVGTGTGIWAIDIAEDFPGAEIVGTDLSPI-----Q 129

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N      +   D  +S+W  S    FD I                  VR         G
Sbjct: 130 PNWAPPNCTFLVDDAESEWAFSPSEAFDYI-----------------HVRSL-------G 165

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           G  G+S ++        H+   G   VEI
Sbjct: 166 G--GISDWKKFLKQAYNHVKPGGW--VEI 190


>gi|37520749|ref|NP_924126.1| hypothetical protein glr1180 [Gloeobacter violaceus PCC 7421]
 gi|35211744|dbj|BAC89121.1| glr1180 [Gloeobacter violaceus PCC 7421]
          Length = 392

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A +F      +   +RILD G GTG     L  ++P  +   +DIS  +L +AK     +
Sbjct: 38  AHSFCRGWRPEPRPIRILDAGCGTGVSTEYLAVQNPEAQVTAIDISEASLALAKRRCAGH 97

Query: 145 GVSERFDTLQSDWFSS--VEGLFDVIVS 170
                    Q     +  +EG FD+I  
Sbjct: 98  A---NVQFAQMSLTDAGDLEGQFDLINC 122


>gi|297735070|emb|CBI17432.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   + +   +    +L++G GTG + L LL+ +   + V V++  + +EI +     +
Sbjct: 62  VLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQ--RVVAVELDARMVEILRKRVAEH 119

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G+ ++   +  D   +    FD++V+N PY
Sbjct: 120 GLEDQLTVICKDALKTDFPQFDLVVANIPY 149


>gi|241765725|ref|ZP_04763672.1| ribosomal protein L11 methyltransferase [Acidovorax delafieldii
           2AN]
 gi|241364412|gb|EER59530.1| ribosomal protein L11 methyltransferase [Acidovorax delafieldii
           2AN]
          Length = 300

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   +     +  + R+LD G G+G + +A  K         VDI   A+E    NA  N
Sbjct: 158 ARRGAASAHTENPLGRVLDYGCGSGILAIAAAK-FGAIDIDAVDIDPAAVESTVLNAQAN 216

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSN 171
           GV      L +      +GL+D +++N
Sbjct: 217 GVQ-----LHAGLPDKAQGLYDTVLAN 238


>gi|229593165|ref|YP_002875284.1| hypothetical protein PFLU5795 [Pseudomonas fluorescens SBW25]
 gi|229365031|emb|CAY53198.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 398

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGVAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKASEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|55981823|ref|YP_145120.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           thermophilus HB8]
 gi|55773236|dbj|BAD71677.1| ubiquinone/menaquinone biosynthesis methyltransferase [Thermus
           thermophilus HB8]
          Length = 220

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 26/131 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++   RILDL TGTG + L L + +P  + VG D +   L IA+  A   G+  RF    
Sbjct: 34  EKAPRRILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEAD 93

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +G FD +              +    R+F             + Y      + 
Sbjct: 94  ALALPFPDGAFDAV-------------TIAFGFRNF-------------ADYEKALRELY 127

Query: 215 RHLNKDGLCSV 225
           R L   G   V
Sbjct: 128 RVLAPGGRLVV 138


>gi|320529957|ref|ZP_08031033.1| ribosomal protein L11 methyltransferase [Selenomonas artemidis
           F0399]
 gi|320137754|gb|EFW29660.1| ribosomal protein L11 methyltransferase [Selenomonas artemidis
           F0399]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 33/152 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+ D+G G+G + +A  K     + + +D    A+ +A+ N V N V      ++SD
Sbjct: 173 PGTRVYDVGCGSGILAIAAAKLGAG-EVLAMDCDPVAVRVAEQNIVQNDVRGHVVAMESD 231

Query: 157 WFSSVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
             +   G     +I++N   I  V++  L                 DGL           
Sbjct: 232 LLAICRGMEPAGLIMAN--IIADVVIRLL-----------------DGLD---------- 262

Query: 215 RHLNKDG-LCSVEIGYNQKVDVVRIFESRKLF 245
             L   G   +  I  ++  DV R  E     
Sbjct: 263 EFLAPGGTFLASGIIDDRIGDVERAAEQHGFT 294


>gi|326424100|ref|NP_761737.2| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
           CMCP6]
 gi|319999480|gb|AAO11264.2| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio vulnificus
           CMCP6]
          Length = 418

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 6/123 (4%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTG 107
           H  LG   +R F + R+  SS  +    E+      + +     +++ +    ++++GTG
Sbjct: 152 HYDLGNDLYRVFLDERMLYSSALYHSDSESLEQAQINKMDRLCQQLQLKPSDEVIEIGTG 211

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            GA+ + +  E+   +     IS +  + AK      G++ER   L+ D +  + G FD 
Sbjct: 212 WGAMAIYMA-ETYGCRVTTTTISDEQYDYAKQQIAERGLTERIQLLKKD-YRDLTGQFDK 269

Query: 168 IVS 170
           +VS
Sbjct: 270 LVS 272


>gi|220908408|ref|YP_002483719.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219865019|gb|ACL45358.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 263

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 26/150 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  +   L +       RILDLG GTG   L L +  P  +  G+D+S   L  A     
Sbjct: 84  EQVVRQELLQSIAHSPTRILDLGCGTGTATLMLKQAVPRAEVTGLDLSPYMLSRAIHKTR 143

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGID 201
             G+   F    ++        FD++V+                    + P  +L     
Sbjct: 144 AAGLEVEFVQGNAECTHFATESFDLVVA---------------SFLLHETP--ALVS--- 183

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                + I     R L+  G   +  G+  
Sbjct: 184 -----QAILRECHRLLSVGGRLVILDGHQH 208


>gi|218782134|ref|YP_002433452.1| ribosomal L11 methyltransferase [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763518|gb|ACL05984.1| ribosomal L11 methyltransferase [Desulfatibacillum alkenivorans
           AK-01]
          Length = 283

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 2/96 (2%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T + V +      P    R    +LD GTGTG + L+ LK       +  DI   AL 
Sbjct: 116 PTTRMAVKAIEQVLSPDNPLRPQGSVLDAGTGTGVLALSALKLGME-NALCTDIDPCALF 174

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             + NA+ NG+  R           + G + +I++N
Sbjct: 175 ETRENALLNGLENRVRVEDIPI-PEIPGRYSLILAN 209


>gi|150397255|ref|YP_001327722.1| ribosomal protein L11 methyltransferase [Sinorhizobium medicae
           WSM419]
 gi|150028770|gb|ABR60887.1| ribosomal L11 methyltransferase [Sinorhizobium medicae WSM419]
          Length = 297

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 55/170 (32%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         R V   LDLGTG+G + +A  K       +  DI   A  +A  NA  NG
Sbjct: 146 LEMLASVARSRPVSNALDLGTGSGVLAIAAWKLL-HVPVLATDIDPVATFVASENARRNG 204

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           V        +  F S      G FD+I++N           L   +    P+++      
Sbjct: 205 VVTGLTFATAPGFHSNTFSASGPFDLIIAN----------ILARPLMKMAPQLA------ 248

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                         +L   G   +  I   Q+  V+  +  + L      
Sbjct: 249 -------------ANLAPGGSVILSGILAEQRWKVIAAYNGQNLKHARTI 285


>gi|255745534|ref|ZP_05419482.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholera CIRS
           101]
 gi|262158392|ref|ZP_06029508.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           INDRE 91/1]
 gi|262170255|ref|ZP_06037942.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           RC27]
 gi|255736609|gb|EET92006.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholera CIRS
           101]
 gi|262021270|gb|EEY39984.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           RC27]
 gi|262029833|gb|EEY48481.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae
           INDRE 91/1]
          Length = 413

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 244 LNNQITLLKQD-YRLLSGQYDKLVS 267


>gi|16803511|ref|NP_464996.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           EGD-e]
 gi|224500509|ref|ZP_03668858.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           Finland 1988]
 gi|224501589|ref|ZP_03669896.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           R2-561]
 gi|254829770|ref|ZP_05234425.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           10403S]
 gi|284801858|ref|YP_003413723.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           08-5578]
 gi|284995000|ref|YP_003416768.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           08-5923]
 gi|38605513|sp|Q9S5A2|PRMA_LISMO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|5689041|dbj|BAA82791.1| orf35 [Listeria monocytogenes]
 gi|16410900|emb|CAC99549.1| lmo1471 [Listeria monocytogenes EGD-e]
 gi|284057420|gb|ADB68361.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           08-5578]
 gi|284060467|gb|ADB71406.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           08-5923]
          Length = 314

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 231 NNLLQDINKTNVDIVVAN---ILAEVILLFPEDVYK-----ALKPG--GVFIASGIIEDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L   G   +E    Q   V  I   R 
Sbjct: 281 AKVVEEALKNAG-LIIEKMEQQGDWV-AIISKRG 312


>gi|330952937|gb|EGH53197.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae Cit 7]
          Length = 374

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N  T     
Sbjct: 223 LPHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWQTTLGDR 282

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 DVQLRAGDGLEMQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQARAALVTGGALYI 339


>gi|225572198|ref|ZP_03781062.1| hypothetical protein RUMHYD_00492 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040370|gb|EEG50616.1| hypothetical protein RUMHYD_00492 [Blautia hydrogenotrophica DSM
           10507]
          Length = 183

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L       E RP T+ + ++      P++      R LDL +G+GA+ +         
Sbjct: 11  LPLKTVPG-LETRPTTDRIKETLFNILQPKLLDS---RFLDLFSGSGAIGIE-ALSRGAA 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPY 174
             V ++ S KA+   K N     + E+   +++D F  +     E  FD I  +PPY
Sbjct: 66  LAVFIEKSPKAVGCIKENLAFTRLQEQARVIKTDVFQGLRQLEGEKPFDCIFMDPPY 122


>gi|34762532|ref|ZP_00143529.1| Ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|237741339|ref|ZP_04571820.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 4_1_13]
 gi|27887810|gb|EAA24881.1| Ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|229430871|gb|EEO41083.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 4_1_13]
          Length = 312

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKLLGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   E   L +V    D    + R + 
Sbjct: 252 DVLVKLLDEIKYILKENSIVLFSGIIEDKLNEVISKAEDIGLEVVEVKAD---KEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|262191455|ref|ZP_06049641.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae CT
           5369-93]
 gi|262032650|gb|EEY51202.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae CT
           5369-93]
          Length = 413

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 185 MQRLCDQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 244 LNNQITLLKQD-YRLLSGQYDKLVS 267


>gi|238757143|ref|ZP_04618330.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia aldovae ATCC 35236]
 gi|238704521|gb|EEP97051.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia aldovae ATCC 35236]
          Length = 176

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+   D   ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 4   EAVRVLALERLSLSDATHLIDVGAGTGSVALEAALRFPDLRVTAIERNPVALELINENRQ 63

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G   + D +       +    D I                             GG  G
Sbjct: 64  RLGCR-KVDIIAGVAPLPLSDKADAI---------------------------FIGGSGG 95

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 96  --HLTDLIDWSLMMLNPGGRLVL 116


>gi|225867797|ref|YP_002743745.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
 gi|259534580|sp|C0MF82|PRMA_STRS7 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|225701073|emb|CAW97890.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +AK N   N  ++       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEVFAYDLDDVAVRVAKDNIALNQATDNIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSN 171
           D    +    DVIV+N
Sbjct: 229 DLLKGLTQEADVIVAN 244


>gi|195978885|ref|YP_002124129.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225871293|ref|YP_002747240.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           equi 4047]
 gi|226710116|sp|B4U5A5|PRMA_STREM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|254783314|sp|C0M9U4|PRMA_STRE4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|195975590|gb|ACG63116.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|225700697|emb|CAW95301.1| ribosomal protein L11 methyltransferase [Streptococcus equi subsp.
           equi 4047]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +AK N   N  ++       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEVFAYDLDDVAVRVAKDNIALNQATDNIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSN 171
           D    +    DVIV+N
Sbjct: 229 DLLKGLTQEADVIVAN 244


>gi|114683757|ref|XP_001159580.1| PREDICTED: hemK methyltransferase family member 2 isoform 1 [Pan
           troglodytes]
          Length = 186

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 59/191 (30%), Gaps = 36/191 (18%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELARVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +A       A  N V  +                                 +   V
Sbjct: 77  DINPEAAACTLETARCNKVHIQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLFL 246
                  +  GG +G          V   L+  GL  +  I  N   ++++I +++ L  
Sbjct: 106 GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGLQG 165

Query: 247 VNAFKDYGGND 257
             A     G +
Sbjct: 166 TTALSRQAGRE 176


>gi|70733157|ref|YP_262930.1| hypothetical protein PFL_5872 [Pseudomonas fluorescens Pf-5]
 gi|68347456|gb|AAY95062.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 398

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKASEERFDVIVADPPAFIKRKKDL-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRLLNKDGILV 335


>gi|323126438|gb|ADX23735.1| ribosomal protein L11 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|224046260|ref|XP_002197924.1| PREDICTED: trimethylguanosine synthase homolog [Taeniopygia
           guttata]
          Length = 892

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 18/158 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +     S   + + +DI  + L +A+ NA   GV+E  D L  D+ + 
Sbjct: 735 IVDAFCGVGGNAIQFALTSK--RVIAIDIDPEKLRLARHNAEVYGVAEHIDFLCGDFMAL 792

Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-------IADG 212
             GL  DV+  +PP+      D    E+ D    I      DG   +R        I   
Sbjct: 793 AAGLCADVVFLSPPW---GGPDYATAEIFDIQTMIC----PDGFEIFRLSKMITNNIVYF 845

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           + R+ + + + S+  G   KV++ + F + KL  + A+
Sbjct: 846 LPRNADINQVASL-AGPGGKVEIEQNFLNNKLKTITAY 882


>gi|332668944|ref|YP_004451952.1| type 11 methyltransferase [Cellulomonas fimi ATCC 484]
 gi|332337982|gb|AEE44565.1| Methyltransferase type 11 [Cellulomonas fimi ATCC 484]
          Length = 240

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 39/141 (27%), Gaps = 29/141 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L       +      +LDLG GTG   +      P  + VGVD S   L  A        
Sbjct: 22  LDHVRELADAIGATSVLDLGCGTG--LVTAALVRPGRRVVGVDPSATMLAYA----ARRP 75

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
             +R   +  D     +G FD             +  +   V    P  +          
Sbjct: 76  GGDRVTWVHGDSRDVPDGPFD-------------LALMTGNVAQHIPDPAW--------- 113

Query: 206 YRTIADGVSRHLNKDGLCSVE 226
            +     +   L   G+   E
Sbjct: 114 -QRTLADLHDALRPGGVLVFE 133


>gi|312963653|ref|ZP_07778134.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6]
 gi|311282162|gb|EFQ60762.1| SAM-dependent methyltransferase [Pseudomonas fluorescens WH6]
          Length = 398

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGVQ-AAAFGASEVFCVDASAFALDGVERNAALNGVAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKASEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|161613364|ref|YP_001587329.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161362728|gb|ABX66496.1| hypothetical protein SPAB_01075 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 192

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTSIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|145300123|ref|YP_001142964.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142852895|gb|ABO91216.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 418

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 30/178 (16%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  +     T      A L     R+E      +L++GTG
Sbjct: 138 HYDLGNTLYQGFLDSHMQYSSAIYPGTESTLEEAQQAKLHTICERLELGPDDHLLEIGTG 197

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + +   +     +     IS    + A+      G+ +R   L  D +  +EG FD 
Sbjct: 198 WGGLAIYAARHY-GCRVTTTTISQAQHDYAREWIEREGLGDRITLLLED-YRKLEGTFDK 255

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +VS         ++ +      F P                    +SR L   G   +
Sbjct: 256 LVS---------IEMIEAVGHAFLPDY---------------FRQLSRLLKPGGRLLI 289


>gi|94995182|ref|YP_603280.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10750]
 gi|166223495|sp|Q1J4K0|PRMA_STRPF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|94548690|gb|ABF38736.1| Ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10750]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|94989325|ref|YP_597426.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94993213|ref|YP_601312.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS2096]
 gi|166223492|sp|Q1J9P3|PRMA_STRPB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223493|sp|Q1JJU1|PRMA_STRPC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|94542833|gb|ABF32882.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS9429]
 gi|94546721|gb|ABF36768.1| Ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS2096]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|71409126|ref|XP_806926.1| proliferator-activated receptor-interacting protein (PRIP)
           interacting protein (PIMT) [Trypanosoma
 gi|70870807|gb|EAN85075.1| proliferator-activated receptor-interacting protein (PRIP)
           interacting protein (PIMT), putative [Trypanosoma cruzi]
          Length = 200

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
           +LDL  G G   + L +     K V VDI   A+E AK N    GV +R      D+   
Sbjct: 64  VLDLFCGCGGDTVQLARVYE--KVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDFRTL 121

Query: 158 -FSSVEGLFDVIVSNPPY 174
              ++E  FD +  +PP+
Sbjct: 122 KLDNME--FDALHCSPPW 137


>gi|71409977|ref|XP_807306.1| proliferator-activated receptor-interacting protein (PRIP)
           interacting protein (PIMT) [Trypanosoma
 gi|70871278|gb|EAN85455.1| proliferator-activated receptor-interacting protein (PRIP)
           interacting protein (PIMT), putative [Trypanosoma cruzi]
          Length = 250

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--- 157
           +LDL  G G   + L +     K V VDI   A+E AK N    GV +R      D+   
Sbjct: 64  VLDLFCGCGGDTVQLARVYE--KVVAVDIDPDAIEAAKKNVEVYGVGDRVSFYCCDFRTL 121

Query: 158 -FSSVEGLFDVIVSNPPY 174
              ++E  FD +  +PP+
Sbjct: 122 KLDNME--FDALHCSPPW 137


>gi|110634343|ref|YP_674551.1| ribosomal protein L11 methyltransferase [Mesorhizobium sp. BNC1]
 gi|123353552|sp|Q11GT9|PRMA_MESSB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|110285327|gb|ABG63386.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Chelativorans sp. BNC1]
          Length = 290

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 58/170 (34%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      + +      LDLGTG+  + +A+ +       +  DI   A+ +A+ N   N 
Sbjct: 139 LEMISRVVPREHPRNALDLGTGSAVLAIAIAR-LAHIPVLATDIDPVAVRVARENVRLNR 197

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +E  +T  +  F          FD+IV+N           L   +    P ++      
Sbjct: 198 AAEWVETAAAPGFHHPAFARRMPFDLIVAN----------ILARPLIGLAPAMA------ 241

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                        RHL+  G   +  I  +Q+  V+  +  +    +   
Sbjct: 242 -------------RHLSPGGSLILSGILTHQRRQVIAGYVGQGFRHLTTL 278


>gi|332161187|ref|YP_004297764.1| cobalt-precorrin-6Y C(15)-methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325665417|gb|ADZ42061.1| cobalt-precorrin-6Y C(15)-methyltransferase [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330861282|emb|CBX71528.1| putative cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating] [Yersinia enterocolitica W22703]
          Length = 189

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+   D   ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 17  EAVRVLALERLSLSDATHLIDVGAGTGSVALEAALRFPDLRVTAIERNPVALELINENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G   + D +       +    D I                             GG  G
Sbjct: 77  RLGCR-KVDIIAGVAPLPLSDKADAI---------------------------FIGGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 109 --HLTDLIDWSLMMLNPGGRLVL 129


>gi|94991270|ref|YP_599370.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10270]
 gi|166223494|sp|Q1JET3|PRMA_STRPD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|94544778|gb|ABF34826.1| Ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10270]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|313898104|ref|ZP_07831643.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2]
 gi|312957132|gb|EFR38761.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. HGF2]
          Length = 444

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 52  HRILGWR----DFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
             + G R      ++++ ++SS +F    PR +TE+L   AL F+    ++     +LDL
Sbjct: 248 QLLFGERAITDSIHDLKFSISSKSFYQVNPR-QTEILYGKALEFAKLTGKE----TVLDL 302

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             G G + + L + +      G++I  +A+  A+ NA  NG++   + + SD     + L
Sbjct: 303 YCGVGTISMFLAQRAK--HVTGIEIVPQAIRDARKNAALNGIA-NIEFVCSDAADYAKKL 359

Query: 165 F------DVIVSNPP 173
                  DVIV +PP
Sbjct: 360 CEQGAHPDVIVVDPP 374


>gi|307544769|ref|YP_003897248.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM
           2581]
 gi|307216793|emb|CBV42063.1| ribosomal protein L11 methyltransferase [Halomonas elongata DSM
           2581]
          Length = 304

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 31/162 (19%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A    L    + D   +LD+G G+G + +A           G DI  +AL  ++ NA  N
Sbjct: 154 AWLDGLAVDGELDDREVLDVGCGSGILAIA-ALRLGARHATGTDIDPQALTASRDNAERN 212

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           GV E    L+       E  F ++V+N   +   +V+                       
Sbjct: 213 GVDETALRLEYPESLEAEARFPLVVAN--ILAGPLVE----------------------- 247

Query: 205 HYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLF 245
               +AD ++  +   G  ++  I   Q  +V+  + +R L 
Sbjct: 248 ----LADEIAERVAPGGRLALSGILETQADEVLAAYAARGLT 285


>gi|206901072|ref|YP_002250863.1| putative methyltransferase [Dictyoglomus thermophilum H-6-12]
 gi|206740175|gb|ACI19233.1| putative methyltransferase [Dictyoglomus thermophilum H-6-12]
          Length = 189

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 29/131 (22%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL  G+G V +  +      K V V+    A+ + + N  + G+ ++   +  D F  +
Sbjct: 50  LDLFAGSGIVGIEAISYGAE-KVVFVENHLNAVRLLRENIKSLGLQDKTRVIYKDVFDFL 108

Query: 162 EG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  FD+I ++PPY     +  +   V DF                          L
Sbjct: 109 NKFSLERFDIIFADPPYELGEKIVDVVKYVNDF------------------------NWL 144

Query: 218 NKDGLCSVEIG 228
              G+  +E  
Sbjct: 145 KDQGMLIIEHH 155


>gi|326918818|ref|XP_003205683.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog [Meleagris
           gallopavo]
          Length = 662

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              HE      + G      D  ++   +S D F     +       L  ++  + +   
Sbjct: 492 RCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGA---EVLYQAVRELSQAAT 548

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             +L D+  GTG + L+L +     K +GV+I  KA+E A+ NA  NG+S 
Sbjct: 549 NTVLLDVCCGTGTIGLSLARHV--SKVIGVEIVQKAVEDARWNAAFNGISN 597


>gi|171778873|ref|ZP_02919935.1| hypothetical protein STRINF_00794 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282519|gb|EDT47943.1| hypothetical protein STRINF_00794 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAVRVAQENIDLNANTENIHVAT 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    V+   DVIV+N                      ++             + +   
Sbjct: 228 GNLLQGVDIQADVIVAN---------------------ILA--------DILVNMTEDAY 258

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +  I  ++   V +  E    FL
Sbjct: 259 RLVKDEGYLIMSGIISDKWEMVRKSAEDAGFFL 291


>gi|116750413|ref|YP_847100.1| putative methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116750455|ref|YP_847142.1| putative methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116699477|gb|ABK18665.1| putative methyltransferase [Syntrophobacter fumaroxidans MPOB]
 gi|116699519|gb|ABK18707.1| putative methyltransferase [Syntrophobacter fumaroxidans MPOB]
          Length = 185

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 11/132 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL    D    RP  + + ++  +   P +      R+LDL  GTGA  L      
Sbjct: 8   FGGRRLRSPGDARI-RPTIDRVREAVFSIIAPHV---PGARVLDLFAGTGAFGLE-ALSR 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPP 173
              + V VD S  A+ I + N    GV +R   + +    ++       G FD++  +PP
Sbjct: 63  GASRAVFVDQSRDAVRIIEENIARCGVQDRARVILAPVRKALLRLAEEGGSFDLVFMDPP 122

Query: 174 YIESVIVDCLGL 185
           Y +  +   L  
Sbjct: 123 YGKGCLEASLPR 134


>gi|313608747|gb|EFR84567.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           F2-208]
          Length = 314

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 64/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +  +  D++V+N        V  L  E                   Y+      
Sbjct: 231 NNLLQDINKINVDIVVAN----ILAEVILLFPE-----------------DVYKA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|291526121|emb|CBK91708.1| Putative RNA methylase family UPF0020 [Eubacterium rectale DSM
           17629]
          Length = 487

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 28/170 (16%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R     +     P +     +AL  SL +   ++  +I+D   G G + +      P  +
Sbjct: 308 RFAYRKNVL---PTSMHPSQAALIVSLAKPYLKETAQIMDPFCGVGTLLIERAHLVPARE 364

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDC 182
               D    A+ + + NA       R + +  D+F    +  FD ++++ P         
Sbjct: 365 IYATDTYGDAITMGRENAA--FAKTRINFIHRDFFDFRHDYKFDELITDMPVRNRQTKAE 422

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGY 229
           + L                    Y    D  + HL   G+  +   EIG+
Sbjct: 423 MEL-------------------FYERFFDKAAEHLVSGGIIVMYSNEIGF 453


>gi|284161838|ref|YP_003400461.1| methyltransferase small [Archaeoglobus profundus DSM 5631]
 gi|284011835|gb|ADB57788.1| methyltransferase small [Archaeoglobus profundus DSM 5631]
          Length = 201

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + F N ++ L      P   +E++V++ L   L  +       ++DLG GTG   L++  
Sbjct: 13  KGFENPKIELEQYVTPPALASEIVVNAKLISDLDNL-------VVDLGCGTGI--LSIAS 63

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEGLFDVIVSNPPY 174
                + VG DI  +AL IA+ NA    V   F     +  +  V      ++ NPP+
Sbjct: 64  SLLGAEAVGFDIDREALRIARENARAMEVEADFVLCSVEKVYLKVPPRNVTVIMNPPF 121


>gi|118445131|ref|YP_879219.1| SAM-dependent methyltransferase [Clostridium novyi NT]
 gi|118135587|gb|ABK62631.1| SAM-dependent methyltransferase [Clostridium novyi NT]
          Length = 247

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 63/186 (33%), Gaps = 29/186 (15%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              + +      VD+ L  +   ++K     ++DL +GTG V   +  ++      G++I
Sbjct: 21  HVIQKKEGFRFGVDAVLLANFANVKK--GFNVIDLCSGTGIVPFIVAGKTEASNITGIEI 78

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYI--------ES 177
             + +E+A  +   N + ER   +  D     +++     DV+  NPPY          S
Sbjct: 79  QEEMVEMADRSVKFNKLEERVRFICEDLKNIEALKKLPKADVVTVNPPYKLANSGIVNPS 138

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR 237
             +     EV                     +       L  +    +    ++  D++ 
Sbjct: 139 DKMAIARHEVCCN---------------LEDVIIACRTLLKDNKRMYMVHRPDRLADIIT 183

Query: 238 IFESRK 243
           +    K
Sbjct: 184 LMRKHK 189


>gi|86149082|ref|ZP_01067314.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596908|ref|ZP_01100144.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|85840440|gb|EAQ57697.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190597|gb|EAQ94570.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|284925763|gb|ADC28115.1| putative methyltransferase domain protein [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 233

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +++ + N  +N +         + F  +   FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIKLIEKNLKSNKIQGDIFHDDFNQF-QIIKKFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P  S     + +             L  +G    
Sbjct: 117 EDQHKAISKFQEFLPLHSFLAKTNSM-------------LKPNGTLYF 151


>gi|320040035|gb|EFW21969.1| RNA methylase [Coccidioides posadasii str. Silveira]
          Length = 240

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   + + +A  +     +    ++D   G G   +A  + + + +   ++    +L+ A
Sbjct: 54  TPEPIANKIAAHMTAAAPQKKSIVIDTFAGVGGNAIAFARSNKWRRVYAIEKDPASLQCA 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV ++    Q D F  ++        + VI ++PP+            +   +
Sbjct: 114 KHNAKIYGVEDKITWFQGDCFEILKTQLKDLAPYSVIFASPPWGGPGYRSDKVFNLSTME 173

Query: 192 P 192
           P
Sbjct: 174 P 174


>gi|17987767|ref|NP_540401.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. 16M]
 gi|17983489|gb|AAL52665.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. 16M]
          Length = 441

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 165 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 223

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 224 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 265

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 266 -------HVGVGHFAEYFQHVARLMKPDGVFLL 291


>gi|89894032|ref|YP_517519.1| hypothetical protein DSY1286 [Desulfitobacterium hafniense Y51]
 gi|219668416|ref|YP_002458851.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
 gi|89333480|dbj|BAE83075.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538676|gb|ACL20415.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
          Length = 301

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 23/175 (13%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   +L  ++  D   ILD G G+G     L K +   K +GVDI+ + +E A+  A   
Sbjct: 39  ATVKNLEVMDVNDGDFILDAGCGSGLTACYLAK-NKGCKIIGVDINSQMIEKARQRAEHE 97

Query: 145 GVSERFDTLQSDW--FSSVEGLFDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGI 200
           GV+   +   +D       +  FD I+      +++   V      V   + RI+     
Sbjct: 98  GVAHLVEFRVADVNRLPFPDDHFDWIMCESITVFLDKGKVYQEFFRVLKPEGRIA----- 152

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK------VDVVRIFESRKLFLVNA 249
                   +   +   L       +E+ Y Q        +  +   +     V  
Sbjct: 153 ---DLEMALLYELPPQLRAQ----MELCYGQGTDPLSFEEWNKTLTAAGFVDVEI 200


>gi|167624720|ref|YP_001675014.1| type 12 methyltransferase [Shewanella halifaxensis HAW-EB4]
 gi|167354742|gb|ABZ77355.1| Methyltransferase type 12 [Shewanella halifaxensis HAW-EB4]
          Length = 218

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 61/183 (33%), Gaps = 55/183 (30%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +   R+L+L  G G +   LL   P    +  D++ K L +A+ N   N +++    L 
Sbjct: 47  PKQDARVLELACGPGNITRYLLSLRPQLSILATDLAPKMLILAQHN---NPLAD-VALLD 102

Query: 155 SDWFSSVEGLFDVIVS--NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           S   + +   FD I+     PY+                P  +L            + D 
Sbjct: 103 SRELNMLNERFDAIMCGFCLPYLS---------------PHEAL-----------ALIDD 136

Query: 213 VSRHLNKDGLCS---VEIGYNQ-------------------KVDVVRIFESRKLFLVNAF 250
            S+ L  +G+     +E G +Q                     D+V   ES    ++   
Sbjct: 137 ASQRLTANGVFYLSTME-GSDQAPREDISGDGEKMYTYFHRGADLVSALESAGFSIIELK 195

Query: 251 KDY 253
           +  
Sbjct: 196 RKL 198


>gi|87159831|ref|NP_877426.2| hemK methyltransferase family member 2 isoform 2 [Homo sapiens]
          Length = 186

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 36/179 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLNALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +A       A  N V  +                                 +   V
Sbjct: 77  DINPEAAACTLETARCNKVHIQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLF 245
                  +  GG +G          V   L+  GL  +  I  N   ++++I +++ L 
Sbjct: 106 GSHGIEAAWAGGKNGREVMDRFFPLVPDLLSPKGLFYLVTIKENNPEEILKIMKTKGLQ 164


>gi|15965908|ref|NP_386261.1| ribosomal protein L11 methyltransferase [Sinorhizobium meliloti
           1021]
 gi|307308218|ref|ZP_07587927.1| ribosomal L11 methyltransferase [Sinorhizobium meliloti BL225C]
 gi|307319685|ref|ZP_07599110.1| ribosomal L11 methyltransferase [Sinorhizobium meliloti AK83]
 gi|38605418|sp|Q92NN5|PRMA_RHIME RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|15075177|emb|CAC46734.1| Putative ribosomal protein L11 methyltransferase [Sinorhizobium
           meliloti 1021]
 gi|306894616|gb|EFN25377.1| ribosomal L11 methyltransferase [Sinorhizobium meliloti AK83]
 gi|306901216|gb|EFN31822.1| ribosomal L11 methyltransferase [Sinorhizobium meliloti BL225C]
          Length = 291

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 7/111 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         R V   LDLGTG+G + +A  K       +  DI   A  +A  NA  NG
Sbjct: 140 LEMLASVARSRPVRNALDLGTGSGVLAIAAWKLL-HVPVLATDIDPIATRVAADNARRNG 198

Query: 146 VSERFDTLQSDWFS----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           V        +  F     S  G FD+I++N   +   ++      V +  P
Sbjct: 199 VVTGLTFATAPGFHSTTFSTNGPFDLIIAN--ILARPLMKMAPQLVANLAP 247


>gi|302384332|ref|YP_003820155.1| rRNA (guanine-N(2)-)-methyltransferase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302194960|gb|ADL02532.1| rRNA (guanine-N(2)-)-methyltransferase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 299

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 26/124 (20%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SV 161
           DLG G GA+  A+L+         +D+  +A+E A+ N        R     +D  +   
Sbjct: 166 DLGCGYGALATAVLRSGAVTALRLIDLDRRAVEAARRNVE----DPRATFEWADVRTLEA 221

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  D IVSNPP+                      DGG +     +      +  L K G
Sbjct: 222 AGDLDFIVSNPPFH---------------------DGGAEDRRLGQAFIKKAAEMLRKGG 260

Query: 222 LCSV 225
              +
Sbjct: 261 TLWL 264


>gi|237814924|ref|ZP_04593922.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           str. 2308 A]
 gi|237789761|gb|EEP63971.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           str. 2308 A]
          Length = 441

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 165 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 223

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 224 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 265

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 266 -------HVGVGHFAEYFQHVARLMKPDGVFLL 291


>gi|223044364|ref|ZP_03614398.1| ribosomal protein L11 methyltransferase [Staphylococcus capitis
           SK14]
 gi|222442233|gb|EEE48344.1| ribosomal protein L11 methyltransferase [Staphylococcus capitis
           SK14]
          Length = 312

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    I+D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  
Sbjct: 172 QPTDSIIDVGTGSGILSIA-SHLVGVKRIKALDIDEMAVNVAKENFKKNRCEDAIEAVPG 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           +     +  ++++++N   I + I++ +  +  +
Sbjct: 231 NLLKEEKEKYNIVIAN---ILAHIIEEMIEDAYN 261


>gi|150398665|ref|YP_001329132.1| cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           medicae WSM419]
 gi|150030180|gb|ABR62297.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           medicae WSM419]
          Length = 413

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 24/179 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFE----PRPETELLVDSA----LAFSLPRIEKRDVVRILD 103
           H  LG  DFY  +L L  +        R   E L ++A    L     ++  +  +++LD
Sbjct: 124 HYDLGN-DFY--KLFLDQNMLYSCAYFREPDETL-EAAQRNKLRLLGAKLCLKPGMKVLD 179

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G + L L       + +GV +S +   +A   A   G+++R      D +  VEG
Sbjct: 180 IGCGWGDLALYLA-ALEDVEVLGVTLSKEQQALASERARAAGMADRVRFELKD-YRDVEG 237

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
            FD IVS    +       +      F    +L    DGL+   +I      H++  G+
Sbjct: 238 PFDRIVS----VGMFEHVGVHHYDEFFKKLNALMP-DDGLAVLHSI-----GHMSPPGM 286


>gi|255264382|ref|ZP_05343724.1| ribosomal protein L11 methyltransferase [Thalassiobium sp. R2A62]
 gi|255106717|gb|EET49391.1| ribosomal protein L11 methyltransferase [Thalassiobium sp. R2A62]
          Length = 291

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 48/195 (24%)

Query: 73  EPRPETELLVDSALAF-------------SLPRIEKRDVV--RILDLGTGTGAVCLALLK 117
            P  +  LL+++A+AF             +L R+++  V    + D+G GT  + +A  +
Sbjct: 109 VPEGKIALLIEAAMAFGTGHHGTTLGCLRALDRLDQASVTGQNVADIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPP 173
             P       DI   A+++A++N   N +  R   +++  F + E      FD++ +N  
Sbjct: 169 IWPNP-AWASDIDQVAVDVAEANVAANNLQGRVKCVEAAGFDAPELHDAAPFDLVFAN-- 225

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
            I    +  L  ++                     ++DG    L+  G+        Q  
Sbjct: 226 -ILKGPLVALSPDMASH------------------VSDGAHVILS--GIL-----NEQAD 259

Query: 234 DVVRIFESRKLFLVN 248
           +V+ ++      L++
Sbjct: 260 EVIAVYAQNGFNLIH 274


>gi|238924727|ref|YP_002938243.1| hypothetical protein EUBREC_2378 [Eubacterium rectale ATCC 33656]
 gi|238876402|gb|ACR76109.1| Hypothetical protein EUBREC_2378 [Eubacterium rectale ATCC 33656]
          Length = 487

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 28/170 (16%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R     +     P +     +AL  SL +   ++  +I+D   G G + +      P  +
Sbjct: 308 RFAYRKNVL---PTSMHPSQAALIVSLAKPYLKETAQIMDPFCGVGTLLIERAHLVPARE 364

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDC 182
               D    A+ + + NA       R + +  D+F    +  FD ++++ P         
Sbjct: 365 IYATDTYGDAITMGRENAE--FAKTRINFIHRDFFDFRHDYKFDELITDMPVRNRQTKAE 422

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGY 229
           + L                    Y    D  + HL   G+  +   EIG+
Sbjct: 423 MEL-------------------FYERFFDKAAEHLVSGGIIVMYSNEIGF 453


>gi|220912882|ref|YP_002488191.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
 gi|219859760|gb|ACL40102.1| methyltransferase small [Arthrobacter chlorophenolicus A6]
          Length = 418

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +     +DLG GTG +     +  P  K    D S  A+  A + A  NG+  R   LQ 
Sbjct: 270 KPARHAVDLGCGTGILAAMYARTYPEAKVTATDQSAAAVASALATARANGLDGRISALQD 329

Query: 156 DWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D  S++ +   D+++ NPP+     V                  G  GL     + +   
Sbjct: 330 DALSTMADASADLVLLNPPFHVGAGVH----------------AGA-GL----KLIEAAG 368

Query: 215 RHLNKDGLCS 224
           R L   G   
Sbjct: 369 RVLAPGGELW 378


>gi|53802699|ref|YP_112622.1| UbiE/COQ5 family methlytransferase [Methylococcus capsulatus str.
           Bath]
 gi|53756460|gb|AAU90751.1| methyltransferase, UbiE/COQ5 family [Methylococcus capsulatus str.
           Bath]
          Length = 305

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 38/195 (19%)

Query: 58  RDFYNVRLTLSSDTFEP--RPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
             F N  L L    +E   +  ++ L++ + +  ++  IE  D   +LD G G G   + 
Sbjct: 44  AWFDNENLALHYGYWEEGIKTHSQALINKNRIMAAIAGIEAGD--HVLDAGCGIGGSSIW 101

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNP 172
           L K     +  G+ +S + +E A+ NA  +GV+++ +   +D+  +   + +FDV+ +  
Sbjct: 102 LAKHV-GARATGITVSEQQVEHARRNARRHGVADKTEFQVADFCQTPFPDAVFDVVWA-- 158

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                V   C   + RDF                        R L   G      GY   
Sbjct: 159 -----VESSCYATDKRDF-------------------FREAYRVLKPGGTLIACDGY--- 191

Query: 233 VDVVRIFESRKLFLV 247
               R F+  +   V
Sbjct: 192 -AARREFDEAEWRAV 205


>gi|47095423|ref|ZP_00233033.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           str. 1/2a F6854]
 gi|254898363|ref|ZP_05258287.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           J0161]
 gi|254912145|ref|ZP_05262157.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           J2818]
 gi|254936473|ref|ZP_05268170.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           F6900]
 gi|47016244|gb|EAL07167.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258609066|gb|EEW21674.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           F6900]
 gi|293590117|gb|EFF98451.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes
           J2818]
          Length = 314

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N        V  L  E                   Y+      
Sbjct: 231 NNLLQDINKTNVDIVVAN----ILAEVILLFPE-----------------DVYKA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGVFIASGIIE---DKAKVVEEALKNAGLIIGKIEQ 300


>gi|269140490|ref|YP_003297191.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202]
 gi|267986151|gb|ACY85980.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda EIB202]
 gi|304560281|gb|ADM42945.1| Ribosomal protein L11 methyltransferase [Edwardsiella tarda FL6-60]
          Length = 293

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGRRLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +          +   D
Sbjct: 168 GSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAERNGVSERLELYLPK-DQPADLSAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|66047506|ref|YP_237347.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
 gi|75500632|sp|Q4ZNG3|RLMG_PSEU2 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|63258213|gb|AAY39309.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 374

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVKSAAENWRATLGDR 282

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 DVRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQARAALVTGGALYI 339


>gi|50915046|ref|YP_061018.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10394]
 gi|60390306|sp|Q5X9S8|PRMA_STRP6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|50904120|gb|AAT87835.1| Ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS10394]
          Length = 317

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|291527144|emb|CBK92730.1| Putative RNA methylase family UPF0020 [Eubacterium rectale M104/1]
          Length = 487

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 28/170 (16%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R     +     P +     +AL  SL +   ++  +I+D   G G + +      P  +
Sbjct: 308 RFAYRKNVL---PTSMHPSQAALIVSLAKPYLKETAQIMDPFCGVGTLLIERAHLVPARE 364

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDC 182
               D    A+ + + NA       R + +  D+F    +  FD ++++ P         
Sbjct: 365 IYATDTYGDAITMGRENAA--FAKTRINFIHRDFFDFRHDYKFDELITDMPVRNRQTKAE 422

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGY 229
           + L                    Y    D  + HL   G+  +   EIG+
Sbjct: 423 MEL-------------------FYERFFDKAAEHLVSGGIIVMYSNEIGF 453


>gi|86749135|ref|YP_485631.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris HaA2]
 gi|86572163|gb|ABD06720.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris HaA2]
          Length = 296

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 5/83 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +       +LDLGTGTG + +A  K       +  DI  +++ +A+ NA  NGV      
Sbjct: 150 LRAGPPRSVLDLGTGTGVLAIAAAKALRQP-VLATDIDRQSVAVARENARLNGVGNLVHA 208

Query: 153 LQSDWFSSV----EGLFDVIVSN 171
             +  F+S        FD++++N
Sbjct: 209 EWATGFASPAFAAHAPFDLVLAN 231


>gi|322834711|ref|YP_004214738.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602]
 gi|321169912|gb|ADW75611.1| ribosomal protein L11 methyltransferase [Rahnella sp. Y9602]
          Length = 294

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 32/158 (20%)

Query: 87  AFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  L  ++  D+    ++D G G+G + +A LK       VG+DI  +A++ ++ NA  N
Sbjct: 146 AMCLQWLDSLDLTDKTVIDFGCGSGILAIAALKLGAK-HVVGIDIDPQAIQASRDNAERN 204

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           GVSER                        Y+     D L  +V   +    L G +  L+
Sbjct: 205 GVSERLSL---------------------YLPKDQPDNLSADVVVANI---LAGPLRELA 240

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
              ++      HL   G+ +     +Q   V   ++ +
Sbjct: 241 PLISVLPVAGGHLGLSGVLA-----SQAQSVADAYKDQ 273


>gi|148546035|ref|YP_001266137.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas putida F1]
 gi|226712965|sp|A5VYJ3|RSMC_PSEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|148510093|gb|ABQ76953.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas putida F1]
          Length = 332

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   L +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDGLPGGHMLDFGCGAGVLGATLKRRYPQSRVTLLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            NG+    + +  D   +      +I+SNPP+
Sbjct: 237 ANGLEG--EVISGDGIDAAPTELSLILSNPPF 266


>gi|293603560|ref|ZP_06685981.1| dethiobiotin synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292817996|gb|EFF77056.1| dethiobiotin synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 478

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 45/135 (33%), Gaps = 28/135 (20%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
                A  R   H  I RI   R                           LA  +  +  
Sbjct: 12  ARFGAAAHRYEHHAPIQRITAER---------------------------LASDIASLRL 44

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               RIL++G GTG +  AL +          DIS   L  A+S       + RF  L  
Sbjct: 45  PARPRILEIGCGTGLLTQALARRLGEADWTITDISPAMLAAARS-GPALPGTARFQLLDG 103

Query: 156 DWFSSVEGLFDVIVS 170
           +   +++G +D+I S
Sbjct: 104 EHPQALDGEYDLICS 118


>gi|107021680|ref|YP_620007.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           AU 1054]
 gi|116688626|ref|YP_834249.1| ribosomal protein L11 methyltransferase [Burkholderia cenocepacia
           HI2424]
 gi|123072432|sp|Q1BZC1|PRMA_BURCA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223397|sp|A0K4C9|PRMA_BURCH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|105891869|gb|ABF75034.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia cenocepacia AU 1054]
 gi|116646715|gb|ABK07356.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia cenocepacia HI2424]
          Length = 300

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGANPVIGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +  +G FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPDGEFDIVVAN 234


>gi|332365985|gb|EGJ43741.1| O-methyltransferase [Streptococcus sanguinis SK1059]
          Length = 239

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  VESFQPKKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMVELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKAFED 185


>gi|317032828|ref|XP_001394451.2| TAM domain methyltransferase [Aspergillus niger CBS 513.88]
          Length = 400

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 42/132 (31%), Gaps = 31/132 (23%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +   RILD+GTG+G   + L  E P  + +G D+S             N V E    L
Sbjct: 151 SPQSPKRILDVGTGSGIWPIELASEFPAAEIIGTDLSP---------VQPNEVPENVHFL 201

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D         D  +  P + + +    L   +                  Y+ +   V
Sbjct: 202 VDDVTE------DEWLWGPNHFDVIHAGHLSGSLPS----------------YKDLLRKV 239

Query: 214 SRHLNKDGLCSV 225
            +HL   G    
Sbjct: 240 FKHLKPGGSVQC 251


>gi|194707300|gb|ACF87734.1| unknown [Zea mays]
          Length = 360

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L   + + 
Sbjct: 169 RGLAFQISANSFFQTNTKQADVLYKLIEDSAGLKGDGSEIVLDLFCGTGTIGLTFARRAK 228

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+E A+ NA  NG+      +Q D       F       D+I+S+P
Sbjct: 229 --HIYGYEVVPEAIEDARKNAKLNGI-NNATFVQGDLNKINESFGKEFPKPDIIISDP 283


>gi|326664911|ref|XP_003197913.1| PREDICTED: trimethylguanosine synthase-like [Danio rerio]
          Length = 809

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 73/178 (41%), Gaps = 17/178 (9%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   +L   +  +   I+D   G G   +         + +G+DI    L +A+ NA   
Sbjct: 631 AEHIALRVQDCFNTELIIDAFCGVGGNAIQFALTGK--RVIGIDIDPVRLALAQHNAAVY 688

Query: 145 GVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI--- 200
           GV +R D LQ D+   +     D++  +PP+      + L  +V +    ++ DG     
Sbjct: 689 GVEQRIDFLQGDFLQLAPHLRGDMVFLSPPW---GGPEYLTADVFNIQTMMTPDGYPFCP 745

Query: 201 ---DGLSHY--RTIADGVSRHLNKDG---LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
              D  S    + I+D +   L ++      +   G   KV+V + F + KL  + A+
Sbjct: 746 FIIDATSILLSKMISDNIVYFLPRNADMEQIASLAGPGGKVEVEQNFLNNKLKTITAY 803


>gi|256004628|ref|ZP_05429605.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|255991363|gb|EEU01468.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|316941278|gb|ADU75312.1| SAM-dependent methyltransferase [Clostridium thermocellum DSM 1313]
          Length = 409

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  R+LD  T TG+  L             VDIS  A+++AK+NAV NG+  + D +  D
Sbjct: 233 NGKRVLDCFTHTGSFGLNAALGGAE-HVTCVDISQSAIDMAKANAVRNGLDGKMDFVCED 291

Query: 157 WFSSVEGL-------FDVIVSNPP 173
            F  +  L       +D I+ +PP
Sbjct: 292 VFDLLTKLAEQKCHDYDYIILDPP 315


>gi|254556846|ref|YP_003063263.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
           plantarum JDM1]
 gi|308180787|ref|YP_003924915.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|254045773|gb|ACT62566.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
           plantarum JDM1]
 gi|308046278|gb|ADN98821.1| ribosomal protein L11 methyltransferase [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 316

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 51/191 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLV---DSAL----------------AFSLPRIEK 95
             W+ +Y+        T  P  E    V   +  L                   L  +E 
Sbjct: 112 TAWKKYYHPVRVTRYLTIVPSWEQYQPVQSGELVLRLDPGQAFGTGTHPTTKLCLQALET 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+  A++N   N V++     
Sbjct: 172 VINGGEHLIDVGTGSGVLSIA-AKAMGVGAVEAYDLDDVAVASAQTNLDLNPVAKDVHVA 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D  + ++   D+IV+N                      ++             +    
Sbjct: 231 ANDLLAGIDTQADIIVAN---------------------ILA--------EIIIPLVPQA 261

Query: 214 SRHLNKDGLCS 224
            ++L + G   
Sbjct: 262 RQNLKRGGYFI 272


>gi|254303380|ref|ZP_04970738.1| ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323572|gb|EDK88822.1| ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 310

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 160 LLLKLMEKQDFSNKSVIDIGTGSGILMIA-GKFLGAGEVYGTDIDEFSMEVAKENLILNN 218

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 219 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 249

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +VV   E   L +V    D    + R + 
Sbjct: 250 DVLVKLLDEIKYILKENSIVLFSGIIEDKLNEVVSKAEDVGLEVVEVKAD---KEWRAVY 306

Query: 262 FCR 264
           F R
Sbjct: 307 FKR 309


>gi|226693405|ref|NP_001152803.1| N6-DNA methyltransferase A isoform 2 [Mus musculus]
 gi|42742251|gb|AAS45233.1| putative N6-DNA methyltransferase A transcript variant [Mus
           musculus]
 gi|46411376|gb|AAS94315.1| putative N6-DNA methyltransferase A2 [Mus musculus]
 gi|148665914|gb|EDK98330.1| HemK methyltransferase family member 2, isoform CRA_a [Mus
           musculus]
          Length = 138

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            D +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  RDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI 175
           DI+ +A       A  N V  +     L       ++G  D++V NPPY+
Sbjct: 77  DINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYV 126


>gi|71736672|ref|YP_276454.1| 16S rRNA methylase RsmC [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557225|gb|AAZ36436.1| 16S rRNA methylase RsmC [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 351

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 205 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERVVEVR 264

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 265 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 303

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 304 ARAALVNGGALYI 316


>gi|254246385|ref|ZP_04939706.1| Ribosomal protein L11 [Burkholderia cenocepacia PC184]
 gi|124871161|gb|EAY62877.1| Ribosomal protein L11 [Burkholderia cenocepacia PC184]
          Length = 300

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGANPVIGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +  +G FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPDGEFDIVVAN 234


>gi|302538228|ref|ZP_07290570.1| ribosomal RNA small subunit methyltransferase [Streptomyces sp. C]
 gi|302447123|gb|EFL18939.1| ribosomal RNA small subunit methyltransferase [Streptomyces sp. C]
          Length = 397

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 38/176 (21%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDT 152
             D  R++DLG G G V  A+    P  + V  D S +A+  A++    N    R   + 
Sbjct: 242 NTDGARVVDLGCGNGVVGTAVQVADPDAEVVFTDESYQAVASARATYEANVRPGRRTAEF 301

Query: 153 LQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L  D  + +     D+I++NPP+                    +L            +  
Sbjct: 302 LVGDGVAMLAPSSVDLILNNPPFHSHQATTD----------ATAL-----------RMFA 340

Query: 212 GVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
              + L   G   V     +GY+    + R+F + ++             R ++  
Sbjct: 341 QSRKVLRPGGELWVVANRHMGYH--THLQRLFGNCEVA--------ASEPRFVVLR 386


>gi|225388648|ref|ZP_03758372.1| hypothetical protein CLOSTASPAR_02384 [Clostridium asparagiforme
           DSM 15981]
 gi|225045246|gb|EEG55492.1| hypothetical protein CLOSTASPAR_02384 [Clostridium asparagiforme
           DSM 15981]
          Length = 467

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     +R  +S  +F    +T  L  +     +   + +     + DL +GT
Sbjct: 273 LYGQDYFYEELLGLRFRISPFSFF---QTNSLGAEVLYDMARSYVGETKDKVVFDLYSGT 329

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E A+ NA  NG+ E  + L  D       ++  
Sbjct: 330 GTIAQILA---PVAKKVVGVEIVEEAVEAARMNAKLNGL-ENCEFLAGDVLKVIDEIQDK 385

Query: 165 FDVIVSNPP 173
            D+I+ +PP
Sbjct: 386 PDLIMLDPP 394


>gi|238488575|ref|XP_002375525.1| methyltransferase family protein [Aspergillus flavus NRRL3357]
 gi|220697913|gb|EED54253.1| methyltransferase family protein [Aspergillus flavus NRRL3357]
          Length = 285

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 58/149 (38%), Gaps = 34/149 (22%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LL+  AL  + P  + +   RILD+GTGTG   + + ++ P  + VG D+S       +
Sbjct: 19  KLLLGGALYRA-PIEQAQTPQRILDVGTGTGIWAIDIAEDFPGAEIVGTDLSPI-----Q 72

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N      +   D  +S+W  S    FD I                  VR         G
Sbjct: 73  PNWAPPNCTFLVDDAESEWAFSPSEAFDYI-----------------HVRSL-------G 108

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           G  G+S ++        H+   G   VEI
Sbjct: 109 G--GISDWKKFLKQAYNHVKPGGW--VEI 133


>gi|156402171|ref|XP_001639464.1| predicted protein [Nematostella vectensis]
 gi|156226593|gb|EDO47401.1| predicted protein [Nematostella vectensis]
          Length = 711

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLG 105
               +LG +  +    +V+  +S + F  +  ++   +  +      + ++    +LD+ 
Sbjct: 489 PFTHLLGEKVIHEVICDVKFGISPNAF-FQVNSKA-AEKMIHIISRWMGEQKETTLLDIC 546

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            GTG++ L L K     K +GV++   A+E AK NA+ NG++ 
Sbjct: 547 CGTGSIGLCLAKYV--SKVIGVEVIQSAVEDAKQNAIMNGITN 587


>gi|313680172|ref|YP_004057911.1| 16S rRNA m(2)g 1207 methyltransferase [Oceanithermus profundus DSM
           14977]
 gi|313152887|gb|ADR36738.1| 16S rRNA m(2)G 1207 methyltransferase [Oceanithermus profundus DSM
           14977]
          Length = 371

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 64/222 (28%), Gaps = 47/222 (21%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILD 103
             + E +       +    RLT       P   +   VD A    L  +    +  R+LD
Sbjct: 185 RGEPEPL-----EAELRGRRLTF---WVWPGVFSADAVDPATRLLLEHLPADVEGARVLD 236

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           LG G GA+ L L  E    +   ++    ++E A+ +    G S        D       
Sbjct: 237 LGAGYGALSLPLACE--GAQVTLLEHQLASVESARRSFRAAGRSAAVHHSDVDEALQENE 294

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           ++D++VSNPP+                       GG   L           R     G  
Sbjct: 295 VYDIVVSNPPFH---------------------VGGRVVLDVAEAFVAAAHRRTRPGGRF 333

Query: 224 SVEIGYNQKVDVVRIFESRKLFLVNAF-KDYGGNDRVLLFCR 264
                            +        +  D  GN R L   R
Sbjct: 334 Y--------------LVANPFLKYEVWMHDRFGNVRTLHAGR 361


>gi|218674489|ref|ZP_03524158.1| ribosomal protein L11 methyltransferase [Rhizobium etli GR56]
          Length = 288

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 136 LEVIDRVVRSRRVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATRVAAENVRRNG 194

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N   +   ++                     
Sbjct: 195 IASGIATRTAPGFHSTAFSEHGPFDLIIAN--ILARPLI--------------------- 231

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  ++ HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 232 ------RMAPQLAAHLAPGGSVILSGILAAQRWKVIAAYSGARLRHVRTI 275


>gi|126658081|ref|ZP_01729233.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
 gi|126620719|gb|EAZ91436.1| Methyltransferase type 12 [Cyanothece sp. CCY0110]
          Length = 377

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 24/140 (17%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            + +   R       RILD+G   G   +A+  E P  +  G+DIS   L    + +V  
Sbjct: 186 MVNYLSERFPNFKPRRILDMGCSAGGSTIAMAIEFPDAEVHGIDISSSMLRCGHAVSVAL 245

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            +   +  + +   +  +G FD+IVSN      ++   L   +R                
Sbjct: 246 DLPIYYHQMDASHTTFGDGSFDLIVSN------IVFHELPNGIR---------------- 283

Query: 205 HYRTIADGVSRHLNKDGLCS 224
             R +    SR L+  G+ +
Sbjct: 284 --RKVILECSRLLSPGGIMA 301


>gi|88705244|ref|ZP_01102955.1| cyclopropane-fatty-acyl-phospholipid synthase [Congregibacter
           litoralis KT71]
 gi|88700334|gb|EAQ97442.1| cyclopropane-fatty-acyl-phospholipid synthase [Congregibacter
           litoralis KT71]
          Length = 419

 Score = 60.1 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 12/126 (9%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +R F +  +  SS  FE RPE  L  + A    L     ++E +    +L++
Sbjct: 148 HYDLGNDFFRLFLDPTMMYSSAVFE-RPENTL--EKAAIDKLDELCRQLELKPEDHLLEI 204

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG G + +         K     IS +  + A++     G+ +R   L  D + ++ G 
Sbjct: 205 GTGWGGMAIHAATHY-GCKVTTTTISQEQFDYARARVAELGLEDRITLLCED-YRALTGE 262

Query: 165 FDVIVS 170
           +D +VS
Sbjct: 263 YDKLVS 268


>gi|139474465|ref|YP_001129181.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           str. Manfredo]
 gi|166223496|sp|A2RGK2|PRMA_STRPG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|134272712|emb|CAM30984.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           str. Manfredo]
          Length = 317

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|19746891|ref|NP_608027.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS8232]
 gi|38605358|sp|Q8NZ98|PRMA_STRP8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|19749136|gb|AAL98526.1| putative methyltransferase [Streptococcus pyogenes MGAS8232]
          Length = 317

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|325929552|ref|ZP_08190666.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           perforans 91-118]
 gi|325540062|gb|EGD11690.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           perforans 91-118]
          Length = 431

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       +L++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 188 LERICQKLRLAPHHHVLEIGTGWGGFALHAAREH-GCRVTTTTISREQFELANQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLHD-YRDLEGRFDRVVS 270


>gi|171679108|ref|XP_001904502.1| hypothetical protein [Podospora anserina S mat+]
 gi|170937625|emb|CAP62284.1| unnamed protein product [Podospora anserina S mat+]
          Length = 387

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 32/131 (24%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D  +ILDLGTG+G   + +    P  + +GVD++       + N +   +S   D ++
Sbjct: 146 PSDPQKILDLGTGSGIWAIEVADMFPSAEVIGVDLAP-----TQPNLIPPNLSFEIDDIE 200

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +DW    E  FD I              L + +RD+                  +     
Sbjct: 201 NDWLWG-ENKFDFI----------HARELIMAIRDWP----------------RLFRQAK 233

Query: 215 RHLNKDGLCSV 225
           R L       +
Sbjct: 234 RALKPGAYLQL 244


>gi|77409138|ref|ZP_00785852.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           COH1]
 gi|77172266|gb|EAO75421.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           COH1]
          Length = 317

 Score = 59.7 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    V+   DVI++N                      ++             + D   
Sbjct: 228 GDLLKGVQQEADVIIAN---------------------ILA--------DILIHLTDDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E    FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|284164090|ref|YP_003402369.1| tRNA methyltransferase complex GCD14 subunit [Haloterrigena
           turkmenica DSM 5511]
 gi|284013745|gb|ADB59696.1| tRNA methyltransferase complex GCD14 subunit [Haloterrigena
           turkmenica DSM 5511]
          Length = 270

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 29/126 (23%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD GTGTG +  ++ +     + V  +   +  ++A+ N    GV +  D    D   
Sbjct: 115 RVLDTGTGTGVLAASMARA--GAEVVTYERDPEFADVARENMKLGGVDDSVDVRTGDL-- 170

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
                            +  +D L     D    ++LD G         + +     L  
Sbjct: 171 -----------------TEEIDALEPSSFD---VLTLDTG-----DAAAVVEHAPDLLVD 205

Query: 220 DGLCSV 225
            G  +V
Sbjct: 206 GGFVAV 211


>gi|325929293|ref|ZP_08190424.1| 16S rRNA m(2)G 1207 methyltransferase family [Xanthomonas perforans
           91-118]
 gi|325929320|ref|ZP_08190451.1| 16S rRNA m(2)G 1207 methyltransferase family [Xanthomonas perforans
           91-118]
 gi|325540315|gb|EGD11926.1| 16S rRNA m(2)G 1207 methyltransferase family [Xanthomonas perforans
           91-118]
 gi|325540342|gb|EGD11953.1| 16S rRNA m(2)G 1207 methyltransferase family [Xanthomonas perforans
           91-118]
          Length = 327

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 59/200 (29%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 144 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 201

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 202 VTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 261

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 262 DRP--------------------DIGQRFIAVAAQALRPGGQLILVANRHLPYEQVLNDS 301

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L+ A +
Sbjct: 302 FGQVRVAAERDGFKLIAAIR 321


>gi|330924422|ref|XP_003300634.1| hypothetical protein PTT_11931 [Pyrenophora teres f. teres 0-1]
 gi|311325134|gb|EFQ91267.1| hypothetical protein PTT_11931 [Pyrenophora teres f. teres 0-1]
          Length = 428

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 16/134 (11%)

Query: 61  YNVRLTLSSDTFEP----RPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAV- 111
           + + L +  D   P    R         L+DS         +    +R LD+GTG  A+ 
Sbjct: 55  FGLELDVPGDRLCPPIPNRWNYVAWLQGLIDSTSPDYASNYDPNRQIRGLDIGTGASAIY 114

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-------GL 164
            L   K    +     DI  K+ E A  N   N +  R   LQ+   + +          
Sbjct: 115 TLLCSKSRLNWSMCATDIDKKSFESAARNLALNNLMTRTKLLQTTELNPLIPLTALGVDR 174

Query: 165 FDVIVSNPPYIESV 178
            D  + NPP+   V
Sbjct: 175 LDFTICNPPFFTDV 188


>gi|296424520|ref|XP_002841796.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638044|emb|CAZ85987.1| unnamed protein product [Tuber melanosporum]
          Length = 414

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 39/142 (27%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--S 147
           L  +++    RILD+GTGTG   L + +  P    +G D+S               V  +
Sbjct: 172 LAPLDRNPPKRILDIGTGTGIWALDMAEHFPHAHVIGTDLSP---------IQPTMVLPN 222

Query: 148 ERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            RF+   ++  ++   G FD I S            LG  +++++  ++           
Sbjct: 223 CRFEVDDAELEWTWPPGHFDFIHS----------RLLGQSIKNWETYLA----------- 261

Query: 207 RTIADGVSRHLNKDGLC-SVEI 227
                 +  HL   G    +E 
Sbjct: 262 -----QMFHHLKPGGYVELIEH 278


>gi|289625830|ref|ZP_06458784.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|330868989|gb|EGH03698.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERAVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|254512355|ref|ZP_05124422.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacteraceae
           bacterium KLH11]
 gi|221536066|gb|EEE39054.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacteraceae
           bacterium KLH11]
          Length = 402

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSALAFSL-PRIEKRD 97
            ++ K+ S H  LG  DFY + L    T SS  FE   E+     +A   SL   +  + 
Sbjct: 127 AQAKKNISYHYDLGN-DFYGLWLDDTMTYSSAIFETGQESLESAQTAKYASLVDEMGAKP 185

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              IL++G G G       KE    +  G+ IS + L  AK      G+S+  +    D+
Sbjct: 186 GDHILEIGCGWGGFAEYAAKER-GLRVTGLTISQEQLNFAKERIEKAGLSDLVEFKLQDY 244

Query: 158 FSSVEGLFDVIVS 170
                G +D I S
Sbjct: 245 RDE-RGQYDGIAS 256


>gi|157375799|ref|YP_001474399.1| methyltransferase type 11 [Shewanella sediminis HAW-EB3]
 gi|157318173|gb|ABV37271.1| methyltransferase type 11 [Shewanella sediminis HAW-EB3]
          Length = 210

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 32/150 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              L D        R+  +D   + ++G G G +   LL   P     G D++   +E+A
Sbjct: 24  DMALYDDTFDLFCQRLNDKDTPSLFEIGCGPGNISRFLLNLCPELTIHGTDLAPNMVELA 83

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS--NPPYIESVIVDCLGLEVRDFDPRIS 195
           K     N     F+ +      +V+  +D I+     PYI                    
Sbjct: 84  K----LNNPGATFEVMDCREIHTVDSKYDAIMCGFCLPYISK------------------ 121

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      R +    S  L  +G+  +
Sbjct: 122 --------DDARKLIADASGLLRDEGIIYL 143


>gi|21221531|ref|NP_627310.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           coelicolor A3(2)]
 gi|7672273|emb|CAB89463.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           coelicolor A3(2)]
          Length = 438

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 82/234 (35%), Gaps = 37/234 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWR 58
           ++ALRD       V GL        P +   +  R    +   +     +I  H  +G  
Sbjct: 97  VEALRDPEV-RAAVRGLVKLAGPPLPPAPPPEEVRRARGHLHTKRSDKRAISHHYDVGN- 154

Query: 59  DFYNVRL---TLSSDTFEPRP--ETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGA 110
           DFY + L    + S  + P P  E   L D+    L     +++     R+LD+G G G+
Sbjct: 155 DFYELVLGPSMVYSCAYWPAPPAEGGTLEDAQRDKLELVSRKLDLSPGRRLLDVGCGWGS 214

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +   +E      VGV +S +    A+      G+++R +    D+    +G +D I S
Sbjct: 215 MAIHAAREH-GVSVVGVTLSQEQAAYARKRVADEGLTDRVEIRVQDYRDVADGPYDAISS 273

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                       +   V              G   Y   A  + R L   G   
Sbjct: 274 ----------IGMAEHV--------------GAERYLEYATDLHRLLKPGGRLL 303


>gi|86151537|ref|ZP_01069751.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|205355356|ref|ZP_03222127.1| hypothetical protein Cj8421_0496 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315124025|ref|YP_004066029.1| hypothetical protein ICDCCJ07001_447 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841166|gb|EAQ58414.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|205346590|gb|EDZ33222.1| hypothetical protein Cj8421_0496 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|315017747|gb|ADT65840.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 233

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L   S  +    ++ +L D  L   +          + D+G G G + + L K     
Sbjct: 5   ITLAQLSQGYRYNSDSLILADFILKQGIKGA-------VFDVGAGCGIIGILLKKNIANL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY-----IES 177
               +DI  + +++ + N  +N +         + F  +   FD IV NPP+      +S
Sbjct: 58  SLSLIDIQKENIKLIEKNLKSNKIQGDIFHDDFNQF-QIIKKFDFIVCNPPFYRQGAYKS 116

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   + ++F P  S     + +             L  +G    
Sbjct: 117 EDQHKAISKFQEFLPLHSFLAKTNSM-------------LKPNGALYF 151


>gi|330969526|gb|EGH69592.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 42/138 (30%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPKNLGAARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGDR 282

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 DVRVRAGDGLEMQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQARAALVTGGALYI 339


>gi|313896637|ref|ZP_07830185.1| ribosomal protein L11 methyltransferase [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312974554|gb|EFR40021.1| ribosomal protein L11 methyltransferase [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 29/150 (19%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+ D+G G+G + +A  K     + + +D    A+ +A+ N V N V      ++SD
Sbjct: 173 PGTRVYDVGCGSGILAIAAAKLGAG-EVLAMDCDPVAVRVAEQNIVQNDVRGHVVAMESD 231

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             +   G+                  +   +  +                  + DG+   
Sbjct: 232 LLAICRGM-------------EPAGLIMANIIAY--------------VVIRLLDGLDEF 264

Query: 217 LNKDG-LCSVEIGYNQKVDVVRIFESRKLF 245
           L   G   +  I  ++  DV R  E     
Sbjct: 265 LAPGGTFLASGIIDDRIGDVERAAEQHGFT 294


>gi|313888449|ref|ZP_07822116.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845478|gb|EFR32872.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 542

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 11/98 (11%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +     ++  +E +D  +I DL  G G++ L++ K  P  + +G++I   A++ A+ NA 
Sbjct: 266 EKLYKKAIDYLEPKDDDKIYDLYCGVGSISLSVAKSGP--EVIGIEIVESAVDDARENAE 323

Query: 143 TNGVSERFDTLQSDWFSSVEGLF-------DVIVSNPP 173
            N +  RF  +      ++E L+       + I+ +PP
Sbjct: 324 KNNIKARF--VHGPAEETIEKLWEEEKIAPNKIIVDPP 359


>gi|265983606|ref|ZP_06096341.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. 83/13]
 gi|264662198|gb|EEZ32459.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. 83/13]
          Length = 333

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|188026518|ref|ZP_02962410.2| hypothetical protein PROSTU_04528 [Providencia stuartii ATCC 25827]
 gi|188019245|gb|EDU57285.1| hypothetical protein PROSTU_04528 [Providencia stuartii ATCC 25827]
          Length = 351

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 31/173 (17%)

Query: 54  ILGWRDFYNVRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
           I  W   Y V      +      P   +   +D      L  + +     +LD+  G G 
Sbjct: 169 ITRWWRRYEV-----ENVQIQALPGMFSHNELDIGSELLLSTLNEPITGNLLDIACGNGV 223

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +   +  ++P       D+S  A+  + +    N ++ +   L SD +S +   FD I+S
Sbjct: 224 LAAVVGSQNPNVTLTLSDVSAAAIASSIATLQANQLTGKV--LASDAYSDINDTFDWIIS 281

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           NPP+                      DG     S    +     ++L K G  
Sbjct: 282 NPPFH---------------------DGLNTSYSAAENMIFQAPKYLKKGGRL 313


>gi|186681172|ref|YP_001864368.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186463624|gb|ACC79425.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 441

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           ILD G GTG   L L + +P  K VG+DIS +++++A+     +G     F  L      
Sbjct: 61  ILDAGCGTGYKSLVLAEANPGAKIVGIDISEESIKLAQQRLEHHGFDNAEFHVLPIQELP 120

Query: 160 SVEGLFDVIVS 170
            +   FD I  
Sbjct: 121 KLNYQFDYINC 131


>gi|330965059|gb|EGH65319.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILI 335


>gi|295695885|ref|YP_003589123.1| methyltransferase small [Bacillus tusciae DSM 2912]
 gi|295411487|gb|ADG05979.1| methyltransferase small [Bacillus tusciae DSM 2912]
          Length = 394

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 8/100 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+ T TGA  L    +      V VD S +AL++A+ N   NG S R + ++++
Sbjct: 216 PGAQVLDVFTHTGAFALH-ALKFGAEHVVCVDQSREALDLARENVEVNGFSGRAEFVEAN 274

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDF 190
            F  +         FDV++ +PP         L   +R +
Sbjct: 275 AFDELRALVDQGRQFDVVILDPPAFAKS-RSSLPGAIRGY 313


>gi|269121290|ref|YP_003309467.1| ribosomal protein L11 methyltransferase [Sebaldella termitidis ATCC
           33386]
 gi|268615168|gb|ACZ09536.1| ribosomal protein L11 methyltransferase [Sebaldella termitidis ATCC
           33386]
          Length = 303

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 55/156 (35%), Gaps = 24/156 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVD--------------------SALAFSLPRIEKR 96
           W+ +++          +P  E     +                    ++L   +     +
Sbjct: 107 WKKYFHTTKITDKIVIKPSWEDYTPSEGETVIKIDPGMAFGTGTHETTSLCIKMLEKYAQ 166

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD+G G+G + +   K     K  G+DI      +AK N   N + + F  +  +
Sbjct: 167 GKKNLLDIGCGSGILMIVGAKLGAE-KVDGIDIDPAVESVAKENLEDNEI-DNFSVVIGN 224

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
                +  +D++VSN   +   ++  L    +  +P
Sbjct: 225 LVDDTDKKYDIVVSN--ILADTLMALLDDIEKVLEP 258


>gi|56808291|ref|ZP_00366056.1| COG2264: Ribosomal protein L11 methylase [Streptococcus pyogenes
           M49 591]
 gi|209560118|ref|YP_002286590.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           NZ131]
 gi|226710121|sp|B5XIN3|PRMA_STRPZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|209541319|gb|ACI61895.1| Ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           NZ131]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|289648508|ref|ZP_06479851.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. 2250]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|254707821|ref|ZP_05169649.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M163/99/10]
 gi|261315308|ref|ZP_05954505.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M163/99/10]
 gi|261304334|gb|EEY07831.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M163/99/10]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|40644839|emb|CAE17532.1| C-methyltransferase [Streptomyces griseus subsp. griseus]
          Length = 342

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 2/90 (2%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           + +      LP  ++RD V++LD+  G G     L    P  +   +D     L + ++N
Sbjct: 154 IAELVARHVLPGTKERDEVKVLDIACGHGLYGYTLAAHDPRARIWSLDW-PNVLAVTENN 212

Query: 141 AVTNGVSERFDTLQSDWFS-SVEGLFDVIV 169
           A   GV +R   +  D F   + G +DV+V
Sbjct: 213 AERLGVRDRAHFIPGDMFEVPLGGPYDVVV 242


>gi|326439859|ref|ZP_08214593.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 411

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 31/156 (19%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERF 150
           E+   V+++DLG G G V  A+    P      +D S  A+  A++    N   G   RF
Sbjct: 263 ERAGPVQVVDLGCGNGVVGTAVALADPGASVTFIDESYSAVASAEATYRANVTGGAPARF 322

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             L  D    V +   D++++NPP+                                R +
Sbjct: 323 --LVGDGMDPVPDASVDLVLNNPPFHSHRATTDTTA---------------------RRM 359

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
             G  R L   G   V IG       V + R+F + 
Sbjct: 360 FSGARRALRPGGELWV-IGNRHLGYHVRLRRLFGNA 394


>gi|254489259|ref|ZP_05102463.1| cyclopropane fatty acid synthase [Roseobacter sp. GAI101]
 gi|214042267|gb|EEB82906.1| cyclopropane fatty acid synthase [Roseobacter sp. GAI101]
          Length = 415

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 16/146 (10%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++     +R+LD+G G G + L L ++      +GV +S +   IA   A   G+
Sbjct: 169 AHIAGKLLLEPGMRVLDIGCGWGGMALGLARDY-GVNVLGVTLSKEQHRIATERAHAEGL 227

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++R      D +  V G FD IVS    +       L      F+   +L    DG++  
Sbjct: 228 ADRVIFQLRD-YRHVSGPFDRIVS----VGMFEHVGLPHYGTYFETVRNLLS-PDGVALI 281

Query: 207 RTIADGVS---------RHLNKDGLC 223
            TI              R++   G  
Sbjct: 282 HTIGRSAPPDATNPWISRYIFPGGYI 307


>gi|154253905|ref|YP_001414729.1| cyclopropane-fatty-acyl-phospholipid synthase [Parvibaculum
           lavamentivorans DS-1]
 gi|154157855|gb|ABS65072.1| Cyclopropane-fatty-acyl-phospholipid synthase [Parvibaculum
           lavamentivorans DS-1]
          Length = 415

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 75  RPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           RP+   L ++ LA       ++     +R+LD+G G G + L L +E+     VGV +S 
Sbjct: 148 RPD-MTLEEAQLAKKRHIAAKLRIEPGMRVLDIGCGWGGMALTLAEET-GADVVGVTLSK 205

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +  ++A   A   G+S + +    D + S++  FD +VS
Sbjct: 206 EQHKVATRRAEERGLSGQVEFRLQD-YRSLKENFDRVVS 243


>gi|56697952|ref|YP_168323.1| ribosomal protein L11 methyltransferase, putative [Ruegeria
           pomeroyi DSS-3]
 gi|56679689|gb|AAV96355.1| ribosomal protein L11 methyltransferase, putative [Ruegeria
           pomeroyi DSS-3]
          Length = 292

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 27/151 (17%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++ D+G GT  + +A          +  DI   A+E+A++N   NG++     L++  
Sbjct: 149 AAKVADIGCGTAVLAMA-AARVWQGDFLASDIDAVAVEVAEANLKANGMAGAVTCLEAAG 207

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           F   +     + +  PY      D +   +    P ++L             A  V+ HL
Sbjct: 208 FDHPD-----LAAQAPY------DLIFANILKG-PLVAL-------------APDVASHL 242

Query: 218 NKDGLCSV-EIGYNQKVDVVRIFESRKLFLV 247
              G   +  I   Q  DV+ ++      LV
Sbjct: 243 RPGGYAILSGILNEQADDVIAVYAQAGTNLV 273


>gi|311894925|dbj|BAJ27333.1| putative rRNA (guanine-N(2)-)-methyltransferase [Kitasatospora
           setae KM-6054]
          Length = 388

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 43/132 (32%), Gaps = 23/132 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDT 152
                 RI+DLG G G +  A     P  + + VD S +A+  A+     N G   R + 
Sbjct: 240 PAGAPRRIVDLGCGNGILGTAAALADPDAELLFVDESFQAVASAEETFRGNLGPGRRAEF 299

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L  D  + V     D+++ NPP+                             +    +  
Sbjct: 300 LVGDALADVPSASADLVLLNPPFHSHQATTD---------------------AIAHRMFT 338

Query: 212 GVSRHLNKDGLC 223
           G  R L   G  
Sbjct: 339 GARRVLRPGGEL 350


>gi|306826579|ref|ZP_07459886.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           ATCC 10782]
 gi|304431217|gb|EFM34219.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           ATCC 10782]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|289647710|ref|ZP_06479053.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERAVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|71904342|ref|YP_281145.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS6180]
 gi|123639171|sp|Q48R70|PRMA_STRPM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|71803437|gb|AAX72790.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS6180]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|329121754|ref|ZP_08250371.1| 23S rRNA (uracil-5-)-methyltransferase [Dialister micraerophilus
           DSM 19965]
 gi|327468224|gb|EGF13710.1| 23S rRNA (uracil-5-)-methyltransferase [Dialister micraerophilus
           DSM 19965]
          Length = 648

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 34/204 (16%)

Query: 51  IHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +  I G +        +   +S  +F      +  V+     +L          ++D   
Sbjct: 257 MEHIWGEKTLKASIGKLTFEISPYSFF--QVNKEQVEKLYEKALDFANLSGDETVIDAYC 314

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           GTG + L L +++     +G++I   A+E AK NA  N +    +   +D          
Sbjct: 315 GTGTISLYLAQKAK--HVIGIEIIKDAIENAKENAKRNKIK-NVEFHAADVA-------- 363

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                  Y+  +    +  EV   DP  +   G D       + + + + +N + +  V 
Sbjct: 364 ------KYLPELAKKGIKAEVVVLDPVRA---GCD-----EKVIEAIGK-INPERIVYVS 408

Query: 227 IG-YNQKVDVVRIFESRKLFLVNA 249
                Q  D+ R+   +   L+  
Sbjct: 409 CNVATQARDIERL-SKKGYKLIKI 431


>gi|299068570|emb|CBJ39798.1| putative sam-dependent methyltransferase protein [Ralstonia
           solanacearum CMR15]
          Length = 274

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 31/146 (21%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD    F+   +E      +LD+ +G+G   L L + S   +  GVD+   AL+ A+  A
Sbjct: 47  VDEMRQFAR-WLELSPQSHLLDVCSGSGGPALFLARNS-GCRVTGVDLHPDALQTARQLA 104

Query: 142 VTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
               + +R   ++ D    +   +G FD +                  V     R++L  
Sbjct: 105 QALELHDRSQFVECDVRQRMPFPDGTFDALWC-------------IDSVIHIPDRLAL-- 149

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCS 224
                           R L   G   
Sbjct: 150 -----------LREWCRLLKPGGRFL 164


>gi|168179782|ref|ZP_02614446.1| type I restriction-modification system, M subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669249|gb|EDT81225.1| type I restriction-modification system, M subunit [Clostridium
           botulinum NCTC 2916]
          Length = 511

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  +++L        L  + K+D+  + D   G+G++ L + KE+   K  G +++ 
Sbjct: 201 YTPQQVSKILA------KLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRKFYGQELTS 254

Query: 132 KALEIAKSNAVTNGVS-ERFDTLQSDWFSS---VEGLFDVIVSNPPYIE--SVIVDCLGL 185
               +A+ N + + VS ERFD    D   +   ++  FD +V+NPPY    S     L  
Sbjct: 255 TTYNLARMNMLLHDVSYERFDIRNDDTLENPQHIDMKFDAVVANPPYSAKWSADKKFLDD 314

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           E      +++     D  +  + +       LN+ G  +V
Sbjct: 315 ERFSAYGKLAPKSKAD-YAFVQHMIYQ----LNEGGTMAV 349


>gi|15593010|gb|AAL02176.1|AF403298_1 rRNA methyltransferase EmtA [Enterococcus faecium]
          Length = 341

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 30/170 (17%)

Query: 86  LAFSLPRIEKRDVVRI-LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           +A ++  +   +   + +D   G+G + L+     P  + +G DIS    +IAKSN   +
Sbjct: 176 VAHAMVWLSDPESKDVFVDFCCGSGTI-LSERATYPANQIIGGDISEAVTKIAKSNLDDS 234

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            V       +   FS+  G  D IV+N P+   +  D   LE+ +               
Sbjct: 235 KVQVNVWDARKLPFST--GCVDKIVTNLPFGRQISPDE-DLELFNH-------------- 277

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF---ESRKLFLVNAFK 251
               I   V R L  +G   +         V ++F   +   LF + ++ 
Sbjct: 278 ---HIMIEVCRVLKPNGRAVIL-----SESVNQLFWEAKRLGLFCLESYP 319


>gi|28867642|ref|NP_790261.1| hypothetical protein PSPTO_0412 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28850877|gb|AAO53956.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|331014955|gb|EGH95011.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILI 335


>gi|28378631|ref|NP_785523.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
           plantarum WCFS1]
 gi|38605251|sp|Q88VP9|PRMA_LACPL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|28271467|emb|CAD64372.1| ribosomal protein L11 methyltransferase (putative) [Lactobacillus
           plantarum WCFS1]
          Length = 316

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 51/191 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLV---DSAL----------------AFSLPRIEK 95
             W+ +Y+        T  P  E    V   +  L                   L  +E 
Sbjct: 112 TAWKKYYHPVRVTRYLTIVPSWEQYQPVQSGELVLRLDPGQAFGTGTHPTTKLCLQALET 171

Query: 96  --RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +A  K          D+   A+  A++N   N V++     
Sbjct: 172 VINGGEHLIDVGTGSGVLSIA-AKAMGVGAVEAYDLDDVAVASAQTNLDLNPVAKDVHVA 230

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D  + ++   D+IV+N                      ++             +    
Sbjct: 231 ANDLLAGIDTQADIIVAN---------------------ILA--------EIIIPLVPQA 261

Query: 214 SRHLNKDGLCS 224
            ++L + G   
Sbjct: 262 RQNLKRGGYFI 272


>gi|294496389|ref|YP_003542882.1| methyltransferase [Methanohalophilus mahii DSM 5219]
 gi|292667388|gb|ADE37237.1| methyltransferase [Methanohalophilus mahii DSM 5219]
          Length = 201

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L    L F+  + +  D   + D+G GTG + +         + VG D   KA+ +A+ N
Sbjct: 32  LAAEILHFAYMKGDLEDT--VFDMGCGTGILAIG-AAILGTPEVVGYDSDPKAINVAREN 88

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           AV  GV    + +       V G  + +V NPP+
Sbjct: 89  AVLMGVE--VEFVNCPI-EKVSGKANTVVMNPPF 119


>gi|163801959|ref|ZP_02195855.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. AND4]
 gi|159174100|gb|EDP58908.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. AND4]
          Length = 418

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 73/189 (38%), Gaps = 24/189 (12%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  +  + ++      + +     ++E +   R++++GTG
Sbjct: 152 HYDLGNNLYQAFLDTNMLYSSALYNKKDDSLEQAQINKMERLCQQLELKPSDRVIEIGTG 211

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            GA+ + +             IS +    A+      G+  +   L+ D + ++ G +D 
Sbjct: 212 WGAMAIYMADRY-GCHVTTTTISEEQHAYAERKIKERGLEGKVTLLKED-YRNLTGTYDK 269

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-------------ADGVS 214
           +VS    IE+V    L   +R  +    L  G  GL   + I              D + 
Sbjct: 270 LVS-IEMIEAVGKQFLPSYIRVCESL--LKSG--GLMAIQAITIADQRYDYYSNNVDFIQ 324

Query: 215 RHLNKDGLC 223
           +++   G  
Sbjct: 325 KYIFPGGFL 333


>gi|37521705|ref|NP_925082.1| methyltransferase [Gloeobacter violaceus PCC 7421]
 gi|60390528|sp|Q7NIP7|PRMA_GLOVI RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|35212703|dbj|BAC90077.1| glr2136 [Gloeobacter violaceus PCC 7421]
          Length = 316

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 64/214 (29%), Gaps = 56/214 (26%)

Query: 57  WRD-FYNVRLTLSSDTFEPRPETELLV------------DSALA--FSLPRIEKRDVVRI 101
           WR  F   RL +    + P P  + LV            + A             D+   
Sbjct: 117 WRPIFVGERLVI-WPVWLPDPPGDRLVIPLDPGMAFGTGEHATTRLCLRALESVPDLGTF 175

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
            D+G G+G + +A LK     +G  VD    A+   + N   +G+ ER    +      +
Sbjct: 176 ADVGCGSGVLTVAALKLGAG-RGWAVDTDDLAVVSTRKNLEISGLEERVTVARGS-TEQL 233

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
            G  D +VSN   I + ++  L  E                   +R +           G
Sbjct: 234 SGPLDGVVSN---ILAEVIANLAPE-------------------FRRLVH-------PGG 264

Query: 222 L-----CSVEIGYNQKVDVVRIFESRKLFLVNAF 250
                   +     Q   VV     +   L    
Sbjct: 265 WGIFSGLLL----TQAPRVVEALAGQGFALSETL 294


>gi|322373765|ref|ZP_08048300.1| ribosomal protein L11 methyltransferase [Streptococcus sp. C150]
 gi|321277137|gb|EFX54207.1| ribosomal protein L11 methyltransferase [Streptococcus sp. C150]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +   I       V    E    FL
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|237802338|ref|ZP_04590799.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025195|gb|EGI05251.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|19704929|ref|NP_602424.1| ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|38605367|sp|Q8R6G7|PRMA_FUSNN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|19712826|gb|AAL93723.1| Ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 312

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKILGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   E   L +V    D    + R + 
Sbjct: 252 DILVKLLDEIKYILKENSIVLFSGIIEDKLNEVISKAEDVGLEVVEVKAD---KEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|327303160|ref|XP_003236272.1| hypothetical protein TERG_03318 [Trichophyton rubrum CBS 118892]
 gi|326461614|gb|EGD87067.1| hypothetical protein TERG_03318 [Trichophyton rubrum CBS 118892]
          Length = 283

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         ++++GTG+G +   L        G      +G D++ KA    +     
Sbjct: 54  LPTSTTSPSPVVVEVGTGSGVILGFLAANCKAILGRSDILTIGTDVNRKACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                                NA      +    +  D  S +  G+ D+++ NPPY+ +
Sbjct: 114 AISDKYSEENFRATPANKEGTNAKVPKPVQPLAVITGDLCSPLRPGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGL--------------EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +                   E+  +   ++  GG  G+     + D +   LN + G+
Sbjct: 174 PELPRPPSSSEATSSANGMSKFEIESYFLSLTYAGGEHGMEITDRLLDSIPHVLNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|323140329|ref|ZP_08075261.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT
           12067]
 gi|322415187|gb|EFY05974.1| methyltransferase domain protein [Phascolarctobacterium sp. YIT
           12067]
          Length = 242

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 45/96 (46%), Gaps = 7/96 (7%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+    + P + ++   ++L+LG GTGA+   LL+     +   +D + +   + + +  
Sbjct: 32  DAIFLGNFPHVVRK--AKVLELGCGTGAIS-MLLESRGAAEVTALDCNPQVTRLVRQSVA 88

Query: 143 TNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPY 174
            N + ++F  +  D  +          D++ SNPPY
Sbjct: 89  DNSLQDKFTVIDGDLRNYKQLLQPESMDLVASNPPY 124


>gi|320322630|gb|EFW78723.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330585|gb|EFW86564.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330873498|gb|EGH07647.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERVVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|297622046|ref|YP_003710183.1| 23S rRNA (Uracil-5-)-methyltransferase [Waddlia chondrophila WSU
           86-1044]
 gi|297377347|gb|ADI39177.1| 23S rRNA (Uracil-5-)-methyltransferase [Waddlia chondrophila WSU
           86-1044]
          Length = 441

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)

Query: 56  GWRD--FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           GW +    ++R  +S  +F      +   +      +   E +   R+LD   G G   L
Sbjct: 256 GWMEEEILDLRFYVSPASFFQVNPAQ--AEQLYRQVIDWAELKGGERVLDAYCGVG--TL 311

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNP 172
           +LL      + VGV+   +A+  A+ NA  N + +  F   +++ +       D++V NP
Sbjct: 312 SLLLARKAGRVVGVECVPQAIADAERNASLNCLANVSFVCAEAEKWIQSAERMDLVVLNP 371

Query: 173 P 173
           P
Sbjct: 372 P 372


>gi|281425741|ref|ZP_06256654.1| ribosomal protein L11 methyltransferase [Prevotella oris F0302]
 gi|281400149|gb|EFB30980.1| ribosomal protein L11 methyltransferase [Prevotella oris F0302]
          Length = 287

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +A +L  ++ +D  RILD G GTG + +   K       VG DI   ++E ++ N   
Sbjct: 138 HMIASTLLHLDLKD-KRILDCGCGTGILGIIAAKYGAKA-VVGYDIDEWSVENSQHNIAI 195

Query: 144 NGVSERFDTLQSD--WFSSVEGLFDVIVSN 171
           N V E  +    D    + + G+FD++ +N
Sbjct: 196 NNV-ENIEIYHGDAHVLNHISGVFDIVTAN 224


>gi|229592723|ref|YP_002874842.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
 gi|229364589|emb|CAY52479.1| putative methyltransferase [Pseudomonas fluorescens SBW25]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 43/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A+ N        
Sbjct: 223 LPHLPKNLGSARVADLGCGNGILAIASALQNPEAHYTLVDESYMAVQSAQENWHAALGQR 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 EAVIRAGDGLAGQAPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQARDALVVGGALYI 339


>gi|295109231|emb|CBL23184.1| 23S rRNA m(5)U-1939 methyltransferase [Ruminococcus obeum A2-162]
          Length = 462

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  +S  TF       L  +         I+    + + DL +GTG
Sbjct: 273 LYGQDYFYETLLGLKFRIS--TFSFFQPNSLAAEVLYNIVREYIQNTSGMEVFDLYSGTG 330

Query: 110 AVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLF 165
            +   L    P  K  +G++I   A++ A+ NA  NG+ +    +  D       +    
Sbjct: 331 TIAQLLA---PVAKEVIGIEIIEDAVKAARENAKLNGL-DNCRFIAGDVLKVLDDLTEKP 386

Query: 166 DVIVSNPP 173
           DVIV +PP
Sbjct: 387 DVIVLDPP 394


>gi|294085889|ref|YP_003552649.1| ribosomal L11 methyltransferase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665464|gb|ADE40565.1| ribosomal L11 methyltransferase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 312

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 35/169 (20%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T      A+     R +       LD+G G+  + +A  K  P  K +G D    A+++
Sbjct: 137 PTTEGCLRAMDMIDRRYKGGAPRHTLDMGCGSAILGMAAAKLWPSCKVMGADNDPVAIKV 196

Query: 137 AKSNAVTNGV---SERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A++N + N +     R          SV   G +D+I++N                    
Sbjct: 197 AEANRIRNNIAPTQMRLGVSAGFSGRSVRQNGPYDIILAN-------------------- 236

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIF 239
               +  G       R +A  +  HL  +G   +  I ++Q   V + +
Sbjct: 237 ----ILAGP-----LRKMAPSLMPHLADNGWLILSGILHHQATMVAQAY 276


>gi|255027453|ref|ZP_05299439.1| ribosomal protein L11 methyltransferase [Listeria monocytogenes FSL
           J2-003]
          Length = 302

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 100 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSNY 159

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 160 LQPGDEVIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENITLNKTEHIITVKQ 218

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I +  
Sbjct: 219 NNLLQDINKTNVDIVVAN---ILAEVILLFPEDVYK-----ALKPG--GVFIASGIIEDK 268

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L   G   +E    Q   V  I   R 
Sbjct: 269 AKVVEEALKNAG-LIIEKMEQQGDWV-AIISKRG 300


>gi|120608782|ref|YP_968460.1| precorrin-6Y C5,15-methyltransferase [Acidovorax citrulli AAC00-1]
 gi|120587246|gb|ABM30686.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Acidovorax
           citrulli AAC00-1]
          Length = 447

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 30/165 (18%)

Query: 63  VRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           VR  L    +  R   + L+      A SL R++ R   R+ D+G G+G+V L   +  P
Sbjct: 243 VRFGLPDAAYHQRQPDKGLITKQEVRAVSLARMQLRAASRVWDIGAGSGSVGLEAARLCP 302

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
                 ++ +   +EIA+ N    GVS     +       ++   D              
Sbjct: 303 QGHVWAMEKNEGDVEIARRNVRDFGVSNH-TLVHGKAPEGLDAWPD-------------- 347

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      P     GG  G      IA  + R L   G   +
Sbjct: 348 -----------PDAVFIGGSGG-ELAELIALCLKR-LRPGGWLVM 379


>gi|76786841|ref|YP_330524.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           A909]
 gi|77405071|ref|ZP_00782171.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           H36B]
 gi|123601157|sp|Q3JYX9|PRMA_STRA1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|76561898|gb|ABA44482.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           A909]
 gi|77176365|gb|EAO79134.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           H36B]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAFDLDVVAVRVAQENIDMNPGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    V+   DVIV+N                      ++             + D   
Sbjct: 228 GDLLKGVQQEADVIVAN---------------------ILA--------DILIHLTDDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E    FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|330874682|gb|EGH08831.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILI 335


>gi|294851829|ref|ZP_06792502.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. NVSL
           07-0026]
 gi|294820418|gb|EFG37417.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. NVSL
           07-0026]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|225851987|ref|YP_002732220.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           ATCC 23457]
 gi|256044167|ref|ZP_05447074.1| Cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256264506|ref|ZP_05467038.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|260563525|ref|ZP_05834011.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. 16M]
 gi|265990580|ref|ZP_06103137.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|225640352|gb|ACO00266.1| Cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           ATCC 23457]
 gi|260153541|gb|EEW88633.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. 16M]
 gi|263001364|gb|EEZ13939.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263094839|gb|EEZ18577.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           bv. 2 str. 63/9]
 gi|326408483|gb|ADZ65548.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           M28]
 gi|326538199|gb|ADZ86414.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella melitensis
           M5-90]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|213967814|ref|ZP_03395961.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301382451|ref|ZP_07230869.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061157|ref|ZP_07252698.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           K40]
 gi|302132050|ref|ZP_07258040.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927590|gb|EEB61138.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILI 335


>gi|213422012|ref|ZP_03355078.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 144

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|168703282|ref|ZP_02735559.1| methyltransferase [Gemmata obscuriglobus UQM 2246]
          Length = 395

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 55/163 (33%), Gaps = 28/163 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE----RFDT 152
              R LD    +G   L   +     + + +D S  ALE+A+ NA  NG+      R + 
Sbjct: 221 PGKRFLDAFCYSGGFGLHAARAGA-AEVLCLDGSEPALELARRNAALNGLENVAFERVNV 279

Query: 153 LQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
                  +  G  FDV+V +PP                     +L G       YR +  
Sbjct: 280 FNHLGTLATSGRKFDVVVLDPPKFARNRGAIPE----------ALKG-------YRRLHQ 322

Query: 212 GVSRHLNKDGLCS--VEIGYNQKVDVVRIFESRKLFLVNAFKD 252
              + L  DG+       G    +D+  +        V A +D
Sbjct: 323 LALKLLAPDGVLVSCCCTGLITMLDLEEMLAQ---VAVEAKRD 362


>gi|26991803|ref|NP_747228.1| hypothetical protein PP_5127 [Pseudomonas putida KT2440]
 gi|24986915|gb|AAN70692.1|AE016712_10 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+SE+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRMLNKDGILV 335


>gi|148550203|ref|YP_001270305.1| hypothetical protein Pput_5001 [Pseudomonas putida F1]
 gi|148514261|gb|ABQ81121.1| SAM-dependent methyltransferase [Pseudomonas putida F1]
 gi|313501103|gb|ADR62469.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+SE+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRMLNKDGILV 335


>gi|289624668|ref|ZP_06457622.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|330871120|gb|EGH05829.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGKGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|256368905|ref|YP_003106411.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella microti CCM
           4915]
 gi|255999063|gb|ACU47462.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella microti CCM
           4915]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|254709598|ref|ZP_05171409.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis B2/94]
 gi|256031090|ref|ZP_05444704.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M292/94/1]
 gi|261317126|ref|ZP_05956323.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis B2/94]
 gi|265988164|ref|ZP_06100721.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M292/94/1]
 gi|261296349|gb|EEX99845.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis B2/94]
 gi|264660361|gb|EEZ30622.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           pinnipedialis M292/94/1]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|169633203|ref|YP_001706939.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter baumannii SDF]
 gi|226705028|sp|B0VLL0|PRMA_ACIBS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169151995|emb|CAP00859.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter baumannii]
          Length = 301

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE---TELLVDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   T + +D  LAF           L  + K DV
Sbjct: 100 WMDYYEPIQIGEKFWIVPEWLEP-PEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDV 158

Query: 99  VR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      +
Sbjct: 159 KNKIVIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLYVGLPE 217

Query: 157 WFSS--VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
            F         DV+V+N   I +  +  L  E   +   D   +L G
Sbjct: 218 EFDQEFKPQQADVLVAN---ILAGPLMALAPEFAKLLKSDGDFALAG 261


>gi|315638933|ref|ZP_07894104.1| rRNA methyltransferase [Campylobacter upsaliensis JV21]
 gi|315480962|gb|EFU71595.1| rRNA methyltransferase [Campylobacter upsaliensis JV21]
          Length = 237

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 21/191 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++     + +    ++ LL    L   L      +   +LD+G G G + + L   +   
Sbjct: 4   LKFFQFPNAYRYNSDSLLLSAFILEDKL------NQKTLLDVGAGCGIIGILLKSFNVNL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           K   +++  + + + + N   N             F + E  FD IV NPP+        
Sbjct: 58  KLSLLELQKENIMLIQENLKQNNFEAEILHRDFKEFKN-EKRFDCIVCNPPFYRQEAQK- 115

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR---IF 239
               +     + +             +  GV+  L   G+        + + +     I 
Sbjct: 116 -STNLHKSMSKSASF------LPLEDLVRGVNSLLAPRGVFYF---CYEALALSEICVIL 165

Query: 240 ESRKLFLVNAF 250
           E  KL +    
Sbjct: 166 EKYKLKMTKIR 176


>gi|291619128|ref|YP_003521870.1| PrmA [Pantoea ananatis LMG 20103]
 gi|291154158|gb|ADD78742.1| PrmA [Pantoea ananatis LMG 20103]
          Length = 294

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTSLCLTWLDGLDLAGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGV++R                D
Sbjct: 168 GSGILAIA-ALKLGAAQAIGIDIDPQAIQASRDNAERNGVADRLSLYLPHQ-QPENLQAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|148642862|ref|YP_001273375.1| methyltransferase [Methanobrevibacter smithii ATCC 35061]
 gi|148551879|gb|ABQ87007.1| methyltransferase [Methanobrevibacter smithii ATCC 35061]
          Length = 335

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L +    F PR         A           +   ILD+  G G   + + K +   
Sbjct: 159 LKLNVEEVYFSPR--------LATERKRVSDSVEENENILDMFCGIGPFPVVIAKNN-NV 209

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
               VDI+  A++    N   N +    + +  D      ++   +D I+ N P +    
Sbjct: 210 NITAVDINKNAIKYLNENIRLNKL-HNIEAICGDINEVSKNLNKKYDRIIMNLPGLAYEF 268

Query: 180 VDC 182
           +D 
Sbjct: 269 LDL 271


>gi|71736452|ref|YP_276895.1| hypothetical protein PSPPH_4795 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557005|gb|AAZ36216.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320326358|gb|EFW82411.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331651|gb|EFW87589.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|23014128|ref|ZP_00053962.1| COG2264: Ribosomal protein L11 methylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 299

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 42/167 (25%)

Query: 89  SLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +L  + K+   R +LDLG+G+G + +A  K       V  DI   A+++   NA  NGV 
Sbjct: 150 ALDSLAKQHRRRAVLDLGSGSGILGIAAAKVWATM-VVCTDIDPSAVKVLAGNAANNGVG 208

Query: 148 ERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                + SD + +        +D+I SN           L   +  F P ++        
Sbjct: 209 RFVTAVVSDGYRNPVVGRGKPYDLIFSN----------ILARPLCRFAPDLA-------- 250

Query: 204 SHYRTIADGVSRHLNKDGLCS----VEIGYNQKVDVVRIFESRKLFL 246
                       HL   GL      +E    Q+  V+   E + L L
Sbjct: 251 -----------AHLAPGGLAILSGLLE---RQERMVMANHERQGLTL 283


>gi|330902934|gb|EGH33877.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 177

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 15  KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 73

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 74  VFEALKELKAAEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 116

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 117 EQAMRLLSKDGILV 130


>gi|269978183|ref|ZP_06185133.1| RNA methyltransferase, RsmD family [Mobiluncus mulieris 28-1]
 gi|269933692|gb|EEZ90276.1| RNA methyltransferase, RsmD family [Mobiluncus mulieris 28-1]
          Length = 187

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 34/162 (20%)

Query: 73  EPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            PR     T   V  A+   L         R+LD+  G+GA+ L           + VD 
Sbjct: 16  VPRSGTRPTSERVREAIFSRLDSQGVIAGARVLDIFAGSGALGLE-ALSRGATDAILVDS 74

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           +  A+++ ++NA      ER   + +D   F++  G    FD++  +PPY          
Sbjct: 75  ARGAVQVLRANAAALSAGERVQVVGADAVRFAASLGANERFDLVFIDPPY---------- 124

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                     +LD G         +   V+ HL   G+  +E
Sbjct: 125 ----------ALDSG-----ILDQVLSSVATHLAPAGIIILE 151


>gi|167586069|ref|ZP_02378457.1| ribosomal protein L11 methyltransferase [Burkholderia ubonensis Bu]
          Length = 300

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGANLVVGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D       +   G FD++V+N
Sbjct: 212 ---RADVTYGLPDACPAGEFDIVVAN 234


>gi|294811411|ref|ZP_06770054.1| Ribosomal RNA small subunit methyltransferase [Streptomyces
           clavuligerus ATCC 27064]
 gi|294324010|gb|EFG05653.1| Ribosomal RNA small subunit methyltransferase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 414

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 31/156 (19%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN---GVSERF 150
           E+   V+++DLG G G V  A+    P      +D S  A+  A++    N   G   RF
Sbjct: 266 ERAGPVQVVDLGCGNGVVGTAVALADPGASVTFIDESYSAVASAEATYRANVTGGAPARF 325

Query: 151 DTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             L  D    V +   D++++NPP+                                R +
Sbjct: 326 --LVGDGMDPVPDASVDLVLNNPPFHSHRATTDTTA---------------------RRM 362

Query: 210 ADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFESR 242
             G  R L   G   V IG       V + R+F + 
Sbjct: 363 FSGARRALRPGGELWV-IGNRHLGYHVRLRRLFGNA 397


>gi|288930665|ref|YP_003434725.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642]
 gi|288892913|gb|ADC64450.1| ribosomal L11 methyltransferase [Ferroglobus placidus DSM 10642]
          Length = 197

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 31/157 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           + D+  + DLG GTG + +A      F   +GVD+  +AL +A+ N+ T GV    D + 
Sbjct: 43  QNDLDLVFDLGCGTGIISIASALLGAFS--IGVDVDREALSVARENSKTCGVP--VDFVL 98

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D  +        ++ NPP+            ++ F+                 IA+   
Sbjct: 99  CDVENFNAKKKGTVIMNPPFGIQRRHADRKFLMKAFE-----------------IAE--- 138

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                  +         +  V +  E     + + +K
Sbjct: 139 -------VIYTIHSAGSEEFVKKKAEENGFKVTHVWK 168


>gi|288930622|ref|YP_003434682.1| methyltransferase type 11 [Ferroglobus placidus DSM 10642]
 gi|288892870|gb|ADC64407.1| Methyltransferase type 11 [Ferroglobus placidus DSM 10642]
          Length = 246

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/232 (21%), Positives = 78/232 (33%), Gaps = 58/232 (25%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I  + D+ +    LS            +    LA         D +RILD+GTGTG + +
Sbjct: 8   IRRYWDYRSRDYDLSPGH----SGLPEVWKEVLAEIFE-----DKMRILDVGTGTGFLAV 58

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS--- 170
            L +     + VG+DIS + L++A+  AV  GV   F    ++     +  FD  V    
Sbjct: 59  ILAEL--GHEVVGIDISEEMLKVARRKAVDKGVRIDFRVGDAENLPFDDEEFDAAVCRHV 116

Query: 171 -----NPPYIESVIVDCLGLEVRDFDPRISLDGGI----DG-LSHYRTIADGVSRHLNKD 220
                NP       +      V+         GG     DG   H   I   + R L K 
Sbjct: 117 LWTLPNP----ERAISEWKRVVKK--------GGKVVIIDGNWEH--GILATLKRLLGKA 162

Query: 221 GLCSVE-------------------IGYNQKVDVVRIFESRKLFLVNAFKDY 253
           G+   E                    G   +  V  + +   L  ++  +D 
Sbjct: 163 GMVIFEGKLPKNNSYSKEVKKALPCYGSLTEEKVFELMKKAGLSRISI-RDL 213


>gi|257482977|ref|ZP_05637018.1| hypothetical protein PsyrptA_06961 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|330891351|gb|EGH24012.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985922|gb|EGH84025.1| SAM-dependent methyltransferase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011782|gb|EGH91838.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|227534917|ref|ZP_03964966.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187673|gb|EEI67740.1| methyltransferase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 244

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 23/183 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N+++  SS  F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 15  RNIKIIQSSAVFSFSLDAVLLANFA--------QVKRHSRVVDLAAGNGAVGLFLARDT- 65

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++AK +   N +         D   +     +   D++  NPPY +
Sbjct: 66  DQQVTMVELQPRLADMAKRSVALNQLQ-NVTVQVGDLADATQMVAKDSVDIVTCNPPYFK 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            ++L           T+A   +  L   G         +   + 
Sbjct: 125 VSSQSITSPN-----DHLALARHELTTDFA-TVARVSADLLKYQGKAFYVH---RPERLA 175

Query: 237 RIF 239
            + 
Sbjct: 176 ELL 178


>gi|281418183|ref|ZP_06249203.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|281409585|gb|EFB39843.1| putative RNA methylase [Clostridium thermocellum JW20]
          Length = 409

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 8/84 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  R+LD  T TG+  L             VDIS  A+++AKSNAV NG+  + D +  D
Sbjct: 233 NGKRVLDCFTHTGSFGLNAALGGAE-HVTCVDISQSAIDMAKSNAVRNGLDGKMDFVCED 291

Query: 157 WFSSVEGL-------FDVIVSNPP 173
            F  +  L       +D I+ +PP
Sbjct: 292 VFDLLTKLAEQKCHDYDYIILDPP 315


>gi|19746373|ref|NP_607509.1| hypothetical protein spyM18_1419 [Streptococcus pyogenes MGAS8232]
 gi|19748570|gb|AAL98008.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
          Length = 208

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 54/155 (34%), Gaps = 19/155 (12%)

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DL +G GAV L           V V++  +  ++ + +   N + ++   +  D  + + 
Sbjct: 2   DLCSGNGAVGL-FASTRTKATIVEVELQERLADMGQRSIQLNQLEDQVTMICDDLKNLLN 60

Query: 163 GL----FDVIVSNPPYIESVI--VDCLGLEVR--DFDPRISLDGGIDGLSHYRTIADGVS 214
            +     D+++ NPPY +S       +         +   +L            I     
Sbjct: 61  HVPRSGVDLMLCNPPYFKSHESSKKNVSEHYLLARHEVTTNL----------EEICQVAR 110

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             L  +G  ++    ++ ++++    +  L     
Sbjct: 111 HALKSNGRLAMVHRPDRFLEIIDSLRANGLAPKRV 145


>gi|322833209|ref|YP_004213236.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Rahnella sp. Y9602]
 gi|321168410|gb|ADW74109.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Rahnella sp. Y9602]
          Length = 376

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 9/126 (7%)

Query: 51  IHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTG 109
           + R+    DF +V L +   +F       ++ +   A +   +  R  +R + DL  G G
Sbjct: 191 VQRL--EEDFNHVPLFIRPQSFF--QTNPVVAEKLYATARDWVRGRGDIRSMWDLFCGVG 246

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF-DV 167
              L     +P  K  G++IS +A+  AK +AV  G+    F  L S  F++ +G   D+
Sbjct: 247 GFGLHCA--TPQMKLTGIEISAEAIACAKESAVRLGLQNVEFQALDSTGFATGKGEVPDL 304

Query: 168 IVSNPP 173
           ++ NPP
Sbjct: 305 VLVNPP 310


>gi|158422529|ref|YP_001523821.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571]
 gi|158329418|dbj|BAF86903.1| putative O-methyltransferase [Azorhizobium caulinodans ORS 571]
          Length = 235

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 16/131 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-- 157
           RI+DLG G G   LA+L          V++      +A+ NA  NG+S+R   +++D   
Sbjct: 28  RIVDLGAGVGTAGLAVLVRLREASAHLVELDPATAALARQNAAGNGMSDRCAIVEADVRT 87

Query: 158 -------FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                          D++++NPP+  +          R     ++     DG +    + 
Sbjct: 88  LGKPAGPAEPAAQAADLVIANPPF-NARAAHQTSPHARRATAHMA-----DGETLMDWVL 141

Query: 211 DGVSRHLNKDG 221
               R L   G
Sbjct: 142 A-AYRCLKPGG 151


>gi|167036166|ref|YP_001671397.1| hypothetical protein PputGB1_5177 [Pseudomonas putida GB-1]
 gi|166862654|gb|ABZ01062.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+SE+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRMLNKDGILV 335


>gi|269218062|ref|ZP_06161916.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212997|gb|EEZ79337.1| modification methylase XamI [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 538

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           ++ +V++  A++          R++D G G+G   LA  K  P  +  GVD+   A  + 
Sbjct: 86  SQEIVEAMTAWA---AANGSPTRVIDPGAGSGRYLLAAAKSFPEARLFGVDVDPLAALML 142

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDV---IVSNPPYIESVIVDCLGLE 186
           ++N    G+++R +   SD+ +      D     + NPPY+    +     E
Sbjct: 143 RANLAACGLADRAEVRVSDFRTLSLPPADGSTLFLGNPPYVRHHSISPEWKE 194


>gi|260495012|ref|ZP_05815141.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_33]
 gi|260197455|gb|EEW94973.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_33]
          Length = 312

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKFLGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   E   L +V    D    + R + 
Sbjct: 252 DVLVKLLDEIKYILKENSIVLFSGIIEDKLNEVISKAEDVGLEVVEVKAD---KEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|238754657|ref|ZP_04616010.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC
           29473]
 gi|238707116|gb|EEP99480.1| Ribosomal protein L11 methyltransferase [Yersinia ruckeri ATCC
           29473]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 30/146 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   S 
Sbjct: 182 EGKTIIDFGCGSGILAIA-ALKLGASRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSK 240

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                +   DV+V+N           L   +R+  P IS             +   V  H
Sbjct: 241 -DQPADLSADVVVAN----------ILAGPLRELAPLIS-------------VLPKVGGH 276

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +      Q  +V + +E +
Sbjct: 277 LGLSGVLA-----TQAANVAQAYEDK 297


>gi|123028513|sp|Q0EDR2|RLMG_PSESH RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|229564352|sp|Q48DT7|RLMG_PSE14 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|115265661|dbj|BAF32922.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           phaseolicola]
          Length = 374

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERVVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|68272124|gb|AAH98330.1| N6amt1 protein [Mus musculus]
          Length = 150

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 11/123 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
            D +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  RDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMYT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ +A       A  N V  +     L       ++G  D++V NPPY+ +        
Sbjct: 77  DINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVR 188
           EVR
Sbjct: 132 EVR 134


>gi|1771204|emb|CAA68045.1| methyltransferase [Lactococcus lactis]
          Length = 227

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
              RIL++GT  G   L + +E P  + V +D + + +E+AK N        +    +  
Sbjct: 68  KPKRILEIGTAIGFSALVMAQEVPEAEIVTIDRNPEMIELAKKNLAKYDHRNQIQLKEGD 127

Query: 156 --DWFSSVEGLFDVIVS 170
             D    ++G FD++  
Sbjct: 128 AADVLQELKGPFDLVFM 144


>gi|326571802|gb|EGE21808.1| methyltransferase small [Moraxella catarrhalis BC7]
          Length = 202

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++        +S      PE    +D      L  I+ +     +DLG G G + +   +
Sbjct: 23  QEVLGKPFNFTSTWGIFSPEK---LDDGSLMLLDYIDFQTQDNSIDLGCGYGVLGMTAAR 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E P    + +D    A+E AK N   NG+    + + S+ F  V+    F +++SN P  
Sbjct: 80  ECPKGHHLLIDKDFVAIEYAKLNCKNNGLG-NAEVMLSNGFYHVDKSRQFSLVMSNLPAK 138

Query: 176 ESVIVDCL 183
            S     L
Sbjct: 139 ASKEQHYL 146


>gi|326560681|gb|EGE11049.1| methyltransferase small [Moraxella catarrhalis 46P47B1]
 gi|326561724|gb|EGE12059.1| methyltransferase small [Moraxella catarrhalis 7169]
 gi|326562334|gb|EGE12660.1| methyltransferase small [Moraxella catarrhalis 103P14B1]
 gi|326563111|gb|EGE13384.1| methyltransferase small [Moraxella catarrhalis 12P80B1]
 gi|326569054|gb|EGE19123.1| methyltransferase small [Moraxella catarrhalis BC1]
 gi|326571743|gb|EGE21756.1| methyltransferase small [Moraxella catarrhalis BC8]
 gi|326573489|gb|EGE23455.1| methyltransferase small [Moraxella catarrhalis O35E]
 gi|326575538|gb|EGE25463.1| methyltransferase small [Moraxella catarrhalis 101P30B1]
          Length = 202

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++        +S      PE    +D      L  I+ +     +DLG G G + +   +
Sbjct: 23  QEVLGKPFNFTSTWGIFSPEK---LDDGSLMLLDYIDFQTQDNSIDLGCGYGVLGMTAAR 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E P    + +D    A+E AK N   NG+    + + S+ F  V+    F +++SN P  
Sbjct: 80  ECPKGHHLLIDKDFVAIEYAKLNCKNNGLG-NAEVMLSNGFYHVDKSRQFSLVMSNLPAK 138

Query: 176 ESVIVDCL 183
            S     L
Sbjct: 139 ASKEQHYL 146


>gi|296114098|ref|YP_003628036.1| methyltransferase small [Moraxella catarrhalis RH4]
 gi|295921792|gb|ADG62143.1| methyltransferase small [Moraxella catarrhalis RH4]
          Length = 213

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++        +S      PE    +D      L  I+ +     +DLG G G + +   +
Sbjct: 34  QEVLGKPFNFTSTWGIFSPEK---LDDGSLMLLDYIDFQTQDNSIDLGCGYGVLGMTAAR 90

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E P    + +D    A+E AK N   NG+    + + S+ F  V+    F +++SN P  
Sbjct: 91  ECPKGHHLLIDKDFVAIEYAKLNCKNNGLG-NAEVMLSNGFYHVDKSRQFSLVMSNLPAK 149

Query: 176 ESVIVDCL 183
            S     L
Sbjct: 150 ASKEQHYL 157


>gi|153007910|ref|YP_001369125.1| cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           anthropi ATCC 49188]
 gi|151559798|gb|ABS13296.1| Cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           anthropi ATCC 49188]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKLLVKEGDKVLDIGCGWGGMGLYLARYL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
              IA   A   G+++R     +D + +++  FD +VS
Sbjct: 209 QHAIANQRAQDEGLADRAKFELTD-YRNIDDKFDRLVS 245


>gi|23501352|ref|NP_697479.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis 1330]
 gi|62289436|ref|YP_221229.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82699362|ref|YP_413936.1| methyltransferase [Brucella melitensis biovar Abortus 2308]
 gi|163842731|ref|YP_001627135.1| hypothetical protein BSUIS_A0477 [Brucella suis ATCC 23445]
 gi|189023686|ref|YP_001934454.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           S19]
 gi|254688748|ref|ZP_05152002.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           6 str. 870]
 gi|254693231|ref|ZP_05155059.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           3 str. Tulya]
 gi|254696877|ref|ZP_05158705.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254701255|ref|ZP_05163083.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 5
           str. 513]
 gi|254703802|ref|ZP_05165630.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 3
           str. 686]
 gi|254712986|ref|ZP_05174797.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M644/93/1]
 gi|254716660|ref|ZP_05178471.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M13/05/1]
 gi|254729781|ref|ZP_05188359.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           4 str. 292]
 gi|256254493|ref|ZP_05460029.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti B1/94]
 gi|256256995|ref|ZP_05462531.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           9 str. C68]
 gi|260545813|ref|ZP_05821554.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           NCTC 8038]
 gi|260566945|ref|ZP_05837415.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 4
           str. 40]
 gi|260754227|ref|ZP_05866575.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           6 str. 870]
 gi|260757447|ref|ZP_05869795.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           4 str. 292]
 gi|260761272|ref|ZP_05873615.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260883253|ref|ZP_05894867.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           9 str. C68]
 gi|261213474|ref|ZP_05927755.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           3 str. Tulya]
 gi|261218461|ref|ZP_05932742.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M13/05/1]
 gi|261221667|ref|ZP_05935948.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti B1/94]
 gi|261320689|ref|ZP_05959886.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M644/93/1]
 gi|261751794|ref|ZP_05995503.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 5
           str. 513]
 gi|261754449|ref|ZP_05998158.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 3
           str. 686]
 gi|297247848|ref|ZP_06931566.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           5 str. B3196]
 gi|306842264|ref|ZP_07474927.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. BO2]
 gi|306845080|ref|ZP_07477660.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. BO1]
 gi|23347245|gb|AAN29394.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis 1330]
 gi|62195568|gb|AAX73868.1| Cfa, cyclopropane-fatty-acyl-phospholipid synthase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82615463|emb|CAJ10432.1| SAM (and some other nucleotide) binding motif:Generic
           methyltransferase:Cyclopropane-fatty-acyl-phospholipid
           synthase [Brucella melitensis biovar Abortus 2308]
 gi|163673454|gb|ABY37565.1| hypothetical protein BSUIS_A0477 [Brucella suis ATCC 23445]
 gi|189019258|gb|ACD71980.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           S19]
 gi|260097220|gb|EEW81095.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus
           NCTC 8038]
 gi|260156463|gb|EEW91543.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 4
           str. 40]
 gi|260667765|gb|EEX54705.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           4 str. 292]
 gi|260671704|gb|EEX58525.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           2 str. 86/8/59]
 gi|260674335|gb|EEX61156.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           6 str. 870]
 gi|260872781|gb|EEX79850.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           9 str. C68]
 gi|260915081|gb|EEX81942.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           3 str. Tulya]
 gi|260920251|gb|EEX86904.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti B1/94]
 gi|260923550|gb|EEX90118.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M13/05/1]
 gi|261293379|gb|EEX96875.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M644/93/1]
 gi|261741547|gb|EEY29473.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 5
           str. 513]
 gi|261744202|gb|EEY32128.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella suis bv. 3
           str. 686]
 gi|297175017|gb|EFH34364.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella abortus bv.
           5 str. B3196]
 gi|306274495|gb|EFM56290.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. BO1]
 gi|306287644|gb|EFM59091.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella sp. BO2]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|296127116|ref|YP_003634368.1| methyltransferase [Brachyspira murdochii DSM 12563]
 gi|296018932|gb|ADG72169.1| methyltransferase [Brachyspira murdochii DSM 12563]
          Length = 189

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 42/173 (24%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVT---- 143
           +   I   +   +LDL +G+GA+   AL + +       V+I  +A++    NA      
Sbjct: 30  AFFNIVNAEGKNLLDLCSGSGAIAFEALSRNAKHA--TLVEIDREAVKTIFINAKAIFDN 87

Query: 144 ---NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                  +R   L  D+       FD+I  +PPY  ++  DCL                 
Sbjct: 88  DNSLYKVKRISAL--DYVKRTNDKFDIIYFDPPYHSNIYFDCLN---------------- 129

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
              +          + LN DG+ + E G +         E          KD 
Sbjct: 130 ---AVIER------KLLNDDGVLAAEFGDDY---YKAFLEKENFKN--LIKDI 168


>gi|294637766|ref|ZP_06716040.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC
           23685]
 gi|291089058|gb|EFE21619.1| ribosomal protein L11 methyltransferase [Edwardsiella tarda ATCC
           23685]
          Length = 246

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P PE   +++D  LAF           L  ++  D+V   ++D G 
Sbjct: 108 FGRRLWICPSWREIPDPEAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLVGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +              D
Sbjct: 168 GSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAERNGVSERLELYLPQ-DQPANLSAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|256787280|ref|ZP_05525711.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           lividans TK24]
 gi|289771175|ref|ZP_06530553.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           lividans TK24]
 gi|289701374|gb|EFD68803.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           lividans TK24]
          Length = 438

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/234 (20%), Positives = 82/234 (35%), Gaps = 37/234 (15%)

Query: 1   MQALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWR 58
           ++ALRD       V GL        P +   +  R    +   +     +I  H  +G  
Sbjct: 97  VEALRDPEV-RSAVRGLVKLAGPPLPPAPPPEEVRRARGHLHTKRSDKRAISHHYDVGN- 154

Query: 59  DFYNVRL---TLSSDTFEPRP--ETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGA 110
           DFY + L    + S  + P P  E   L D+    L     +++     R+LD+G G G+
Sbjct: 155 DFYELVLGPSMVYSCAYWPAPPAEGGTLEDAQRDKLELVSRKLDLSPGRRLLDVGCGWGS 214

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +   +E      VGV +S +    A+      G+++R +    D+    +G +D I S
Sbjct: 215 MAIHAAREH-GVSVVGVTLSQEQAAYARKRVADEGLTDRVEIRVQDYRDVADGPYDAISS 273

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                       +   V              G   Y   A  + R L   G   
Sbjct: 274 ----------IGMAEHV--------------GAERYLEYATDLHRLLKPGGRLL 303


>gi|257783882|ref|YP_003179099.1| SAM-dependent methyltransferase [Atopobium parvulum DSM 20469]
 gi|257472389|gb|ACV50508.1| SAM-dependent methyltransferase [Atopobium parvulum DSM 20469]
          Length = 439

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 31/138 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD     G   L        F    VD+S  A+++A+ NA  NG+++R D   ++   
Sbjct: 260 RVLDCFCHVGPFGLNATAGGADF-VRCVDVSQTAIDLARQNAELNGLADRIDFTCANVLE 318

Query: 160 SVE-------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +              G FD+I+ +PP                   R ++ G       Y
Sbjct: 319 YLPELARDRTQLKAEGGPFDLIILDPPAFTKTRDKV----------RSAMRG-------Y 361

Query: 207 RTIADGVSRHLNKDGLCS 224
           + I     + L + G  +
Sbjct: 362 KEINATAMKLLPRGGYLA 379


>gi|284988733|ref|YP_003407287.1| type 11 methyltransferase [Geodermatophilus obscurus DSM 43160]
 gi|284061978|gb|ADB72916.1| Methyltransferase type 11 [Geodermatophilus obscurus DSM 43160]
          Length = 363

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+ D+G G G   + + +  P  +  G DI   ++E A+ NA   GV++R      
Sbjct: 178 RAGGRVADVGCGMGWSAIGIARAYPRARVDGYDIDEPSVEQARRNAEEAGVADRVRFTTV 237

Query: 156 DWFSSVE-GLFDVIVS 170
           D  ++ E G +D++ +
Sbjct: 238 DAAAAGEQGSYDLVAA 253


>gi|114799616|ref|YP_759109.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas
           neptunium ATCC 15444]
 gi|114739790|gb|ABI77915.1| putative ribosomal protein L11 methyltransferase PrmA [Hyphomonas
           neptunium ATCC 15444]
          Length = 285

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 62/173 (35%), Gaps = 37/173 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         R   R+LDLGTG+G + +A LK       VG DI   ++ +A+ NA  N 
Sbjct: 133 LLALAEARRHRKPGRVLDLGTGSGVLAIAALKVGAEM-AVGTDIDRDSVFVARDNARKNH 191

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           VS RF        ++      G +D + +N                    P I L G   
Sbjct: 192 VS-RFFVHHVRGANNPAIRQAGPYDTVFAN----------------ILMKPLIGLAGE-- 232

Query: 202 GLSHYRTI-ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK-LFLVNAFKD 252
                  + A G    L+  GL      ++Q   V   FE    LF     +D
Sbjct: 233 ----IERLSAPGAVIILS--GLL-----HHQAEPVRAAFEGHGMLFQKRIKRD 274


>gi|226494722|ref|NP_001143116.1| hypothetical protein LOC100275594 [Zea mays]
 gi|224031061|gb|ACN34606.1| unknown [Zea mays]
          Length = 558

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      ++      +LDL  GTG + L   + + 
Sbjct: 367 RGLAFQISANSFFQTNTKQADVLYKLIEDSAGLKGDGSEIVLDLFCGTGTIGLTFARRAK 426

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+E A+ NA  NG+      +Q D       F       D+I+S+P
Sbjct: 427 --HIYGYEVVPEAIEDARKNAKLNGI-NNATFVQGDLNKINESFGKEFPKPDIIISDP 481


>gi|254413900|ref|ZP_05027669.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
 gi|196179497|gb|EDX74492.1| methyltransferase, UbiE/COQ5 family [Microcoleus chthonoplastes PCC
           7420]
          Length = 292

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 32/165 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ +   L    +    RILDLG GTG+  L L +  P  + +G+D+S   L +A+  A 
Sbjct: 86  ETWVRQELINRIQGTPRRILDLGCGTGSTTLLLKQAFPEAEVIGLDLSPYMLVMAERKAK 145

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD--PRISLDGGI 200
             GV  ++            G  +        +     D +   +   +  P ++     
Sbjct: 146 AAGVEIQWR----------HGKAEETG-----LPEASFDLVTASLLFHETPPAVA----- 185

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFES 241
                 ++I     R L   G   +  G      Q   +  +FE 
Sbjct: 186 ------KSILRESFRLLKGGGQVLILDGNQRTLRQVNWLTEVFEE 224


>gi|6572621|gb|AAF17325.1|AF139343_1 microcystin synthetase [Microcystis aeruginosa PCC 7820]
          Length = 440

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 8   SQTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPAAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESERFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|127512413|ref|YP_001093610.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella loihica
           PV-4]
 gi|126637708|gb|ABO23351.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella loihica
           PV-4]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 22/152 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++E +    +L++GTG GA+ + + +     + +   IS    + AK+     G
Sbjct: 185 LQTICEKLELKPGEHVLEIGTGWGALAIYMAQHY-GCRVITTTISDAQYQYAKTRIEQAG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISL--DGGI- 200
           +S++   L+ D +  + G +D +VS        +++ +G E     F+    L  D G  
Sbjct: 244 LSDQITLLKQD-YRRLTGQYDKLVS------IEMIEAVGHEYLGTFFETCSGLLKDDGKM 296

Query: 201 --------DG-LSHYRTIADGVSRHLNKDGLC 223
                   DG    YR   D + +++   G  
Sbjct: 297 LLQAITISDGRYEKYRKGVDFIQKYIFPGGCL 328


>gi|327401522|ref|YP_004342361.1| type 11 methyltransferase [Archaeoglobus veneficus SNP6]
 gi|327317030|gb|AEA47646.1| Methyltransferase type 11 [Archaeoglobus veneficus SNP6]
          Length = 252

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 43/224 (19%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           R+++++R       ++  P    L +          E+R  ++ILD+GTGTG + L L +
Sbjct: 13  REYWDLR----GKDYDKSPGHASLPEVWRDVLASVFERR--MQILDVGTGTGFLALILAE 66

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS------- 170
                + VG+D+S   LE+AK  A   GV   F    ++     +  FD ++        
Sbjct: 67  L--GHEVVGIDLSKGMLEVAKKKARKLGVDVEFKLGDAENLPFDDCSFDAVICRHLLWTL 124

Query: 171 -NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS---------HYRTIADGVSRHLNK- 219
            NP       ++     VRD    +++DG    L              IA  V    N  
Sbjct: 125 PNP----QKAIEEWSRVVRDGGKVVAIDG--KWLDSSPPAKLRRFIGRIAVAVYERRNPW 178

Query: 220 ---------DGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                    + +     G +    V  +F    L  ++  KD  
Sbjct: 179 KNYHYRKEINKMLPFYGGSD-PEKVAEMFGRAGLSDISV-KDLS 220


>gi|326574342|gb|EGE24285.1| methyltransferase small [Moraxella catarrhalis CO72]
          Length = 202

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++        +S      PE    +D      L  I+ +     +DLG G G + +   +
Sbjct: 23  QEVLGKPFNFTSTWGIFSPEK---LDDGSLMLLDYIDFQTQDSSIDLGCGYGVLGMTAAR 79

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYI 175
           E P    + +D    A+E AK N   NG+    + + S+ F  V+    F +++SN P  
Sbjct: 80  ECPKGHHLLIDKDFVAIEYAKLNCKNNGLG-NAEVMLSNGFYHVDKSRQFSLVMSNLPAK 138

Query: 176 ESVIVDCL 183
            S     L
Sbjct: 139 ASKEQHYL 146


>gi|148695107|gb|EDL27054.1| mCG12967, isoform CRA_b [Mus musculus]
          Length = 147

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 43  CMLYTIHNTYDDIENKAVADLGCGCGVLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVEE 101

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D +S    +  LFD ++ NPP+
Sbjct: 102 FELT-NVDMIQCDVYSLSNRMSKLFDTVIMNPPF 134


>gi|166795289|ref|NP_083556.2| methyltransferase-like protein 5 [Mus musculus]
 gi|115502261|sp|Q8K1A0|METL5_MOUSE RecName: Full=Methyltransferase-like protein 5
 gi|123236681|emb|CAM19285.1| methyltransferase like 5 [Mus musculus]
 gi|148695106|gb|EDL27053.1| mCG12967, isoform CRA_a [Mus musculus]
          Length = 209

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKAVADLGCGCGVLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D +S    +  LFD ++ NPP+
Sbjct: 97  FELT-NVDMIQCDVYSLSNRMSKLFDTVIMNPPF 129


>gi|20380361|gb|AAH27547.1| Mettl5 protein [Mus musculus]
          Length = 160

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKAVADLGCGCGVLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D +S    +  LFD ++ NPP+
Sbjct: 97  FELT-NVDMIQCDVYSLSNRMSKLFDTVIMNPPF 129


>gi|74227286|dbj|BAE21741.1| unnamed protein product [Mus musculus]
          Length = 166

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKAVADLGCGCGVLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D +S    +  LFD ++ NPP+
Sbjct: 97  FELT-NVDMIQCDVYSLSNRMSKLFDTVIMNPPF 129


>gi|330954994|gb|EGH55254.1| SAM-dependent methyltransferase [Pseudomonas syringae Cit 7]
          Length = 398

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAAEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|330944165|gb|EGH46282.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 344

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAAEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|322411014|gb|EFY01922.1| ribosomal protein L11 methyltransferase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 317

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVGQEADVIVAN 244


>gi|303312089|ref|XP_003066056.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105718|gb|EER23911.1| trimethylguanosine synthase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 240

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 6/98 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D   G G   +A  + + + +   ++    +L+ AK NA   GV ++    Q D F  
Sbjct: 77  VIDTFAGVGGNAIAFARSNKWRRVYAIEKDPASLQCAKHNAKIYGVEDKITWFQGDCFEI 136

Query: 161 VEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           ++        + VI ++PP+            +   +P
Sbjct: 137 LKTQLKDLAPYSVIFASPPWGGPGYRSDKVFNLSTMEP 174


>gi|163796090|ref|ZP_02190052.1| Cyclopropane-fatty-acyl-phospholipid synthase [alpha
           proteobacterium BAL199]
 gi|159178549|gb|EDP63089.1| Cyclopropane-fatty-acyl-phospholipid synthase [alpha
           proteobacterium BAL199]
          Length = 416

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 6/122 (4%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +   R+LD+G+G G + L L  +    +  G+ +S +   ++ + A   GV 
Sbjct: 163 HLAAKLRVKPGHRVLDIGSGWGGLALYLADKHSDVRVDGITLSREQHRVSNARARAAGVD 222

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           +R      D + +VE  +D IVS       ++        R++  +++     DG++   
Sbjct: 223 DRVKFHLQD-YRTVENTYDRIVSV-----GMLEHVGPHHYREYYSKVASLLKPDGVALIH 276

Query: 208 TI 209
            I
Sbjct: 277 AI 278


>gi|157952871|ref|YP_001497763.1| hypothetical protein NY2A_B567L [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123098|gb|ABT14966.1| hypothetical protein NY2A_B567L [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 371

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 54/129 (41%), Gaps = 19/129 (14%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +L+   G+G   +      P     GV++      ++K N   + +  +      D
Sbjct: 42  NPQSVLEPSCGSGEFLIDCETRFPDANITGVELDETLARVSKENTSRSVIHTQ------D 95

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +  EG FD+I+ NPP+++   V+             +  G  +   +   +   ++RH
Sbjct: 96  FLTFDEGKFDLIIGNPPFVQMKAVNN-----------QASTGRSN--LYIEILFKCMTRH 142

Query: 217 LNKDGLCSV 225
           LN +G+ ++
Sbjct: 143 LNDNGVLAM 151


>gi|253681048|ref|ZP_04861851.1| SAM-dependent methyltransferase [Clostridium botulinum D str. 1873]
 gi|253562897|gb|EES92343.1| SAM-dependent methyltransferase [Clostridium botulinum D str. 1873]
          Length = 247

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 68/181 (37%), Gaps = 19/181 (10%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
              + +      +D+ L  +  +++  D  R++DL +GTG V   +  ++      G++I
Sbjct: 21  HVIQKKDGFRFGIDAVLLANFAKVKNGD--RVVDLCSGTGIVPFIIAGKTKASNITGIEI 78

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG--LFDVIVSNPPYI---ESVIVDC 182
                E+A  +   N + ++ + +  D    ++++     DV+  NPPY      ++   
Sbjct: 79  QRDMTEMANRSTKFNKLQDKIEFICEDLTNINNIKKISKADVVTVNPPYKLCNSGIVNPN 138

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
             + +   +   +L            +       L  +    +    ++  D++ +    
Sbjct: 139 DKMAIARHEICCNL----------EDVIIACRTLLKDNKRMYMVHRPDRLADIITLMRKN 188

Query: 243 K 243
           K
Sbjct: 189 K 189


>gi|257051616|ref|YP_003129449.1| methyltransferase small [Halorhabdus utahensis DSM 12940]
 gi|256690379|gb|ACV10716.1| methyltransferase small [Halorhabdus utahensis DSM 12940]
          Length = 211

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + L       +      ++DLG GTG + LA     P  + +GVD+    L  A++N 
Sbjct: 33  VAAHLVHLADLNDDVAGRTVVDLGCGTGMLALAAALRGP-SQVLGVDVDPSPLSTARANR 91

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFD--VIVSNPPY 174
              G       +++D         D   +V NPP+
Sbjct: 92  RRIGTQTTVSWVRADATEPPLCPSDPVTVVMNPPF 126


>gi|242310513|ref|ZP_04809668.1| methyltransferase small [Helicobacter pullorum MIT 98-5489]
 gi|239522911|gb|EEQ62777.1| methyltransferase small [Helicobacter pullorum MIT 98-5489]
          Length = 230

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 73/194 (37%), Gaps = 29/194 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++    D +    +T  L D AL F           +IL++G+G+G + +   +     
Sbjct: 1   MQIYQPKDGYCYNSDTLFLYDFALNFLKKH------QKILEVGSGSGVLGMLCAR---DV 51

Query: 123 KGVGVDI--SCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIES 177
           +   + I  + K  E+ + N   N +       D LQ D+   ++  FD I+SNPP+  +
Sbjct: 52  EIDLMMIEKNPKMWELCQQNLRVNKIKAELLNGDFLQYDF---LDLKFDCILSNPPFYHN 108

Query: 178 VIVDCLGLEV--RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
            ++  +  ++    ++  +           +  +   ++  L   G         +   V
Sbjct: 109 GVIKSVNNDICMARYEENL----------PFEAMVQKINILLKPQGEFIFCYDCRESFKV 158

Query: 236 VRIFESRKLFLVNA 249
             I    K+  +  
Sbjct: 159 FGILFKYKIRPITI 172


>gi|291518465|emb|CBK73686.1| 23S rRNA m(5)U-1939 methyltransferase [Butyrivibrio fibrisolvens
           16/4]
          Length = 428

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALL 116
           +   +  T+S  +F    +T  L    L  +         D   + DL +GTG +   + 
Sbjct: 282 ELLGLSFTISPFSFF---QTNSLGAEVLYSTARDFISTGADGAEVYDLYSGTGTIAQVIA 338

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPP 173
             +      GV+I  +A+E AK NA  NG+ +  D +  D       +    D I+ +PP
Sbjct: 339 PAAK--HVTGVEIIAEAVEAAKENAKLNGL-DNCDFIAGDVLKVLDDITEKPDYIILDPP 395


>gi|256060584|ref|ZP_05450752.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella neotomae
           5K33]
 gi|261324580|ref|ZP_05963777.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella neotomae
           5K33]
 gi|261300560|gb|EEY04057.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella neotomae
           5K33]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
              IA   A   G+++R     +D + ++   FD +VS
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS 245


>gi|149202511|ref|ZP_01879483.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
           TM1035]
 gi|149143793|gb|EDM31827.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
           TM1035]
          Length = 423

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 9/145 (6%)

Query: 32  DRQRFFLTNAIVRSLKH-ESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA- 85
           +R RF+         K   S H  LG   FY++ L    T SS  F+P   +      A 
Sbjct: 136 ERIRFWFKRNSKTQAKRNISYHYDLGNA-FYSLWLDETMTYSSAIFQPGQNSLEQAQIAK 194

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  + ++  +    +L++G G G       KE    +  G+ IS + L+ A+      G
Sbjct: 195 YASMVDQMGVKPGDHVLEIGCGWGGFAEYAAKER-GLRVTGLTISAEQLKYAQDRIARAG 253

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R      D+     G +D I S
Sbjct: 254 LSDRVTLKLQDYRDE-RGTYDGIAS 277


>gi|148560704|ref|YP_001258470.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ovis ATCC
           25840]
 gi|148371961|gb|ABQ61940.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ovis ATCC
           25840]
          Length = 426

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|157165717|ref|YP_001466729.1| methyltransferase small domain-containing protein [Campylobacter
           concisus 13826]
 gi|112800176|gb|EAT97520.1| methyltransferase small [Campylobacter concisus 13826]
          Length = 235

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 14/158 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+G G G + L L ++        +D+     EI+  NA +N +  R  T     F 
Sbjct: 33  RVLDVGAGCGILGLLLKRDFKKIDLSMLDLLELNSEISSFNAKSNCLEARAITADFANFK 92

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             E  FD+I+SNPP+    +       ++      SL+         +    G+S +L  
Sbjct: 93  DSE-KFDLIISNPPFYHDGVTKSQNEHIKVSRYASSLN--------LKDFIRGISVNLKP 143

Query: 220 DGLCSVEIGYNQKVDVVRIFESRK-----LFLVNAFKD 252
                     +   ++    +  K     L  V+  KD
Sbjct: 144 HKRAFFCYAPDNLSEIAACLKEYKLNLVSLKFVHTKKD 181


>gi|300087265|ref|YP_003757787.1| methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299526998|gb|ADJ25466.1| Methyltransferase type 11 [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 222

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 26/129 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++LD+  GTG+    + +     +  GVD+S   L +A+    T G    F+    
Sbjct: 54  KPGDQVLDICCGTGSTTQLIAERLDQGRVTGVDLSPDMLAVARK--KTAGARVSFEMASV 111

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D     +  FD +V       S  +  +  E+R       L                  R
Sbjct: 112 DRLPFDDESFDHVVC------SYGLHEIPRELR-------LAA-----------LAEARR 147

Query: 216 HLNKDGLCS 224
            L   G   
Sbjct: 148 VLKPGGRFL 156


>gi|170118145|ref|XP_001890255.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634801|gb|EDQ99122.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 211

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 18/158 (11%)

Query: 37  FLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP----RPETELLV-DSALAFSLP 91
            L N        +    IL  RDF  + ++L      P    R    L + D   A    
Sbjct: 37  RLLNLKSCHSYRQLTQAIL-HRDF-GLSISLPKHRLCPPVPNRLNYVLWIQDIMHAHRHL 94

Query: 92  RIEKRDVVRILDLGTGTGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           +     ++R +D+GTG  A+   LA   E P ++ V  +I   +   AKSN    G+ ER
Sbjct: 95  QSSPSHIIRGIDVGTGASAIYPLLACKLE-PTWEFVATEIDETSHTYAKSNINLAGLEER 153

Query: 150 FDTLQSDWFSSVEGL--------FDVIVSNPPYIESVI 179
               ++     +           FD I+ NPP+  S  
Sbjct: 154 VLIAKASLEKPLLFPMNDWQLKDFDFIMCNPPFYSSEE 191


>gi|67516749|ref|XP_658260.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4]
 gi|74681487|sp|Q5BFM4|Y0656_EMENI RecName: Full=Uncharacterized methyltransferase AN0656
 gi|40746276|gb|EAA65432.1| hypothetical protein AN0656.2 [Aspergillus nidulans FGSC A4]
 gi|259489076|tpe|CBF89047.1| TPA: Uncharacterized methyltransferase AN0656 (EC 2.1.1.-)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5BFM4] [Aspergillus
           nidulans FGSC A4]
          Length = 286

 Score = 59.7 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 64/182 (35%), Gaps = 27/182 (14%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKAL 134
           P    LV +             V++++DLG GTG   L L K +P   + +G+D S   L
Sbjct: 62  PRFLCLVQTQTNGKSNMTPGEQVLKLVDLGCGTGRNTLQLAKSAPKEAQIIGLDASPGML 121

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           E+A+ N    GV    D  +        G++D++  +P      +   L  E R      
Sbjct: 122 EVAEGNLKAQGVMGTVDERRVVL-----GVYDLL--SP--RPESLPVSLRGEARASGAIS 172

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVNA 249
           +L      L       +G +R +   G   V     E+G                  V +
Sbjct: 173 TLVLEHIPLD---KFFEGAARLIRPGGYLLVTNMHAEMGA---------ISQAGFVDVTS 220

Query: 250 FK 251
            K
Sbjct: 221 GK 222


>gi|147794654|emb|CAN73506.1| hypothetical protein VITISV_007907 [Vitis vinifera]
          Length = 383

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 2/90 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   + +   +    +L++G GTG + L LL+ +   + V V +  + +EI +     +
Sbjct: 62  VLDTIVRKSNIKPTDTVLEIGPGTGNLTLRLLQAAQ--RVVAVXLDARMVEILRKRVAEH 119

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G+ ++   +  D   +    FD++V+N PY
Sbjct: 120 GLEDQLTVICKDALKTDFPQFDLVVANIPY 149


>gi|125974030|ref|YP_001037940.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC
           27405]
 gi|125714255|gb|ABN52747.1| SAM-dependent methyltransferase [Clostridium thermocellum ATCC
           27405]
          Length = 409

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD  T TG+  L             VDIS  A+++AK+NAV NG+  + D +  D
Sbjct: 233 KGKRVLDCFTHTGSFGLNAALGGAE-HVTCVDISQSAIDMAKANAVRNGLDGKMDFVCED 291

Query: 157 WFSSVEGL-------FDVIVSNPP 173
            F  +  L       +D I+ +PP
Sbjct: 292 VFDLLTKLAEQKCHDYDYIILDPP 315


>gi|330903590|gb|EGH34162.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 136

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 45  LPHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWQATLGDR 104

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPY 174
                  D          DV++ NPP+
Sbjct: 105 DVRIQAGDGLEMQEPDSLDVVLCNPPF 131


>gi|260437263|ref|ZP_05791079.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Butyrivibrio crossotus
           DSM 2876]
 gi|292810573|gb|EFF69778.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Butyrivibrio crossotus
           DSM 2876]
          Length = 453

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-FSLPRIEKRDVVRILDLGTGTGAV 111
            I  + +   ++  ++  +F    +T  L    L   +   + + D   + DL +GTG +
Sbjct: 267 YI--YEELLGLKFKITPFSFF---QTNSLGAEVLYTKTREFVGEIDNQVVFDLYSGTGTI 321

Query: 112 CLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDV 167
              L    P  K  VGV+I  +A+  A+ NA  NG+ +  + +  D       ++   D+
Sbjct: 322 AQILA---PVAKKVVGVEIIEEAVVAARENARLNGL-DNCEFIAGDVLKVIDDIKDKPDM 377

Query: 168 IVSNPP 173
           IV +PP
Sbjct: 378 IVLDPP 383


>gi|251781648|ref|YP_002995950.1| ribosomal protein L11 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390277|dbj|BAH80736.1| ribosomal protein L11 methyltransferase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 317

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVGQEADVIVAN 244


>gi|167565750|ref|ZP_02358666.1| putative methyltransferase [Burkholderia oklahomensis EO147]
          Length = 362

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 60/177 (33%), Gaps = 43/177 (24%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            +LG       RL   S+  +P   T  L++SA          R  +R+LD+G GTG V 
Sbjct: 97  YVLGHSPIELRRLDFQSEMLKP--ITRRLLESA--------RLRPSMRVLDIGCGTGGVS 146

Query: 113 LALLKES--PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVI 168
             L  E   P    V +D S  A++ A +NA    +              VEG   FDV+
Sbjct: 147 -MLAAEMVGPTGTVVAIDQSDIAIDAATANAERARL-HNIRFRACGL-DQVEGVHSFDVV 203

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++                V      ++           R      +R +   G  + 
Sbjct: 204 IA--------------RCVLMHQLHVA--------EFIRH----AARFVKPGGFIAF 234


>gi|293340664|ref|XP_001070533.2| PREDICTED: HemK methyltransferase family member 2 (predicted)-like
           [Rattus norvegicus]
 gi|149059755|gb|EDM10638.1| HemK methyltransferase family member 2 (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 150

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVELCLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           DI+ KA       A  N V  +     L       ++G  D++V NPPY+ +        
Sbjct: 77  DINPKAAACTLETARCNRVHLQPVITDLVQGLLPRLKGKVDLLVFNPPYVVTP-----PE 131

Query: 186 EVR 188
           EVR
Sbjct: 132 EVR 134


>gi|330873486|gb|EGH07635.1| methyltransferase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
 gi|330966736|gb|EGH66996.1| methyltransferase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 374

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 47/145 (32%), Gaps = 23/145 (15%)

Query: 83  DSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           D      LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N 
Sbjct: 216 DIGTRALLPYLPKNLGAARVADLGCGNGVLAIASALDNPDAHYTLVDESYMAVQSAAENW 275

Query: 142 VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             +          +D   + E    DV++ NPP+ +  +V                    
Sbjct: 276 RAHLGERDVVLRAADGLDTQEPDSLDVVLCNPPFHQQQVV-------------------- 315

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
            G      +       L   G   +
Sbjct: 316 -GDFLAWRMFLQARAALVTGGALYI 339


>gi|295693148|ref|YP_003601758.1| o-methyltransferase [Lactobacillus crispatus ST1]
 gi|295031254|emb|CBL50733.1| O-methyltransferase [Lactobacillus crispatus ST1]
          Length = 343

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+      F    +T  L   A          RD  +++DL  G  A  + +      
Sbjct: 17  NLRIIQDKTAFSFSMDTLFLAYWAKDLI------RDKDKVVDLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    Q +  ++     +  +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQNEVYSQAVRSVKLNEMENRISVFQDNVLNAGHFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMFMVH 173


>gi|284042773|ref|YP_003393113.1| Cyclopropane-fatty-acyl-phospholipid synthase [Conexibacter woesei
           DSM 14684]
 gi|283946994|gb|ADB49738.1| Cyclopropane-fatty-acyl-phospholipid synthase [Conexibacter woesei
           DSM 14684]
          Length = 423

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 47/142 (33%), Gaps = 25/142 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     ++  R+  R+LD+G G G+  L    E    + VG+ +S     +A+    
Sbjct: 174 ETKLDLVASKLGLREGERVLDVGCGWGSFALH-AAERYGVEVVGITLSPSQAALARERVA 232

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+S+R +    D+       FD I S            +   V           G   
Sbjct: 233 AAGLSDRVEIRLQDYRELGGEQFDAISS----------IGMVEHV-----------GETQ 271

Query: 203 LSHYRTIADGVSRHLNKDGLCS 224
           +  Y  +       L   G   
Sbjct: 272 IDEYARVLAAA---LKPGGRLL 290


>gi|313127018|ref|YP_004037288.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
 gi|312293383|gb|ADQ67843.1| methylase involved in ubiquinone/menaquinone biosynthesis
           [Halogeometricum borinquense DSM 11551]
          Length = 212

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSER 149
              +  D   +LDLGTGTGA+ LAL    P   + VG DIS   LE A+  A   G+ + 
Sbjct: 37  EHADPTDEDVVLDLGTGTGAIALALA---PDAKRVVGRDISEGMLEQAREKAQDAGI-DN 92

Query: 150 FDTLQSDWFSS-VEGLFDVIVSN 171
            +  +  +     E   D++ SN
Sbjct: 93  VEFGEGRFRDPNYEDEVDIVTSN 115


>gi|298251102|ref|ZP_06974906.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
 gi|297549106|gb|EFH82973.1| Methyltransferase type 11 [Ktedonobacter racemifer DSM 44963]
          Length = 267

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 40/168 (23%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
             +T   + +   LV+   + +          R+L+ G G GA  + L + SP      V
Sbjct: 11  HRETIRLQDQASTLVELLHSDT----SYPAGSRVLEAGCGVGAQTVTLAQNSPNALITSV 66

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESVIVDCLGL 185
           DIS  ++  A+      G++      Q+D F+   G   FD I                 
Sbjct: 67  DISEVSVREARRKVAAAGLT-NVHFHQADIFNLSHGLDTFDHIFVCF------------- 112

Query: 186 EVRDFD--PRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVE--IG 228
            V +    P  +L                +  HL   G    +E   G
Sbjct: 113 -VLEHLSRPLEAL--------------QTLKNHLRPGGTITVIEGDHG 145


>gi|294461082|gb|ADE76108.1| unknown [Picea sitchensis]
          Length = 575

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L++ A       +       +LDL  GTG + L L K+       G ++  +A+  A+ N
Sbjct: 409 LIEEA-----ANLRGDGSEIVLDLFCGTGTIGLTLAKKVKN--VYGYEVVPQAVADARRN 461

Query: 141 AVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
           A  N +      ++ D       F +     D+++++P
Sbjct: 462 AERNDIQ-NAKFIEGDLNKIGDDFGNEFPCPDIVITDP 498


>gi|146324689|ref|XP_747013.2| methyltransferase LaeA-like [Aspergillus fumigatus Af293]
 gi|129555467|gb|EAL84975.2| methyltransferase LaeA-like, putative [Aspergillus fumigatus Af293]
 gi|159123898|gb|EDP49017.1| methyltransferase LaeA-like, putative [Aspergillus fumigatus A1163]
          Length = 354

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 45/140 (32%), Gaps = 37/140 (26%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     ++  R+LD+GTGTG   +    E P  + +G D+S             + 
Sbjct: 106 LKGELHAAPIKNPRRVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPSW 156

Query: 146 V--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  + RF+    +   S    FD       YI       L   +RD D            
Sbjct: 157 IPPNCRFEIDDFELPWSYSQPFD-------YIHGRE---LEGAIRDHD------------ 194

Query: 204 SHYRTIADGVSRHLNKDGLC 223
               T+      +L   G  
Sbjct: 195 ----TLFRQAYENLRPGGWL 210


>gi|312277558|gb|ADQ62215.1| Ribosomal protein L11 methyltransferase, putative [Streptococcus
           thermophilus ND03]
          Length = 317

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPGMENIHVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
            +  +G   +   I       V    E    
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVREWAEKAGF 289


>gi|187960035|ref|NP_001107653.1| methyltransferase like 5 [Rattus norvegicus]
 gi|149022182|gb|EDL79076.1| similar to 2810410A08Rik protein (predicted) [Rattus norvegicus]
 gi|165970734|gb|AAI58755.1| Mettl5 protein [Rattus norvegicus]
          Length = 209

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIESKAVADLGCGCGVLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVEE 96

Query: 144 NGVSERFDTLQSDWF---SSVEGLFDVIVSNPPY 174
             ++   D +Q D +   S +  LFD ++ NPP+
Sbjct: 97  FELT-NVDMIQCDVYSLSSRMSKLFDTVIMNPPF 129


>gi|116627095|ref|YP_819714.1| ribosomal protein L11 methyltransferase [Streptococcus thermophilus
           LMD-9]
 gi|122268302|sp|Q03MQ4|PRMA_STRTD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|116100372|gb|ABJ65518.1| LSU ribosomal protein L11P methyltransferase [Streptococcus
           thermophilus LMD-9]
          Length = 317

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 33/151 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPGMENIHVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQEADVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
            +  +G   +   I       V    E    
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVREWAEKAGF 289


>gi|57505402|ref|ZP_00371330.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
 gi|57016227|gb|EAL53013.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
          Length = 237

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 23/192 (11%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++    S+ +    ++ LL    L   L +        +LD+G G G + + L   +   
Sbjct: 4   LKFFQFSNAYRYNSDSLLLSAFILEDKLSQ------KTLLDVGAGCGIIGILLKSFNTNL 57

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVD 181
           K   +++  + + + + N   N      + L  D+     E  FD IV NPP+       
Sbjct: 58  KLSLLELQKENIMLIQENLKQNNFEA--EILHKDFKEFKNEKRFDCIVCNPPFYRQEAQK 115

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR---I 238
                +     + +             +  GV+  L   G+        + + +     I
Sbjct: 116 --STNLHKSISKSASF------LPLEDLVRGVNSLLAPRGVFYF---CYEALALSEICVI 164

Query: 239 FESRKLFLVNAF 250
            E  KL +    
Sbjct: 165 LEKYKLKMTKIR 176


>gi|229520448|ref|ZP_04409873.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TM
           11079-80]
 gi|229342546|gb|EEO07539.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TM
           11079-80]
          Length = 679

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 451 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 509

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 510 LNNQITLLKQD-YRLLSGQYDKLVS 533


>gi|297566408|ref|YP_003685380.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946]
 gi|296850857|gb|ADH63872.1| ribosomal L11 methyltransferase [Meiothermus silvanus DSM 9946]
          Length = 253

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 76  PETELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGAVCLALLKESPFFK 123
           PE  +L++  +AF     E             +  +R+LDLGTG+G   LA+  +     
Sbjct: 87  PEQRILLEPGMAFGTGHHETTRMALEALAERVKPGMRVLDLGTGSGI--LAIAAQMLGAW 144

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            VGVD     +  A+ NA  NGVS  F         +  G+FD+IV+N
Sbjct: 145 AVGVDNDPAVIPQARHNAAANGVSPEFFL---GTLENAHGVFDLIVAN 189


>gi|268325468|emb|CBH39056.1| probable cobalt-precorrin-6Y C(15)-methyltransferase [uncultured
           archaeon]
 gi|268325777|emb|CBH39365.1| probable cobalt-precorrin-6Y C(15)-methyltransferase [uncultured
           archaeon]
          Length = 204

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 33/158 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
            D    R +  L  +   A  + + + +   RILD+GTG+G+V +             V+
Sbjct: 24  PDNLFSRSKAGLTREEIRAIIVSKAQIKGGERILDVGTGSGSVSIEFALLGCD--VTAVE 81

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEV 187
            +    E A+ N    G++++ + +  +     +   FDV                    
Sbjct: 82  KNNDNFETARRNIADFGLNDKIELISGEMEDVKLSHNFDVF------------------- 122

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     GG D L       D V +HL   G   +
Sbjct: 123 --------FFGGTDNLD---KSLDNVYKHLKLGGRIII 149


>gi|242764673|ref|XP_002340822.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724018|gb|EED23435.1| RNA methylase family protein, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 242

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  +     +D V ++D   G G   +A  K   + +   ++     L  A
Sbjct: 55  TPEPVANKIAEHISTSTPKDKVVLIDAFAGAGGNSIAFAKSGRWKRVYAIEKDPAVLACA 114

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV  +    + D F  ++      G + V+ ++PP+            ++  +
Sbjct: 115 KHNAKIYGVQSKITWFEGDCFEILKTHLKDLGFYSVVFASPPWGGPGYRSDEVFNLQTME 174

Query: 192 P 192
           P
Sbjct: 175 P 175


>gi|187925400|ref|YP_001897042.1| ribosomal protein L11 methyltransferase [Burkholderia phytofirmans
           PsJN]
 gi|226710061|sp|B2SYT3|PRMA_BURPP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|187716594|gb|ACD17818.1| ribosomal protein L11 methyltransferase [Burkholderia phytofirmans
           PsJN]
          Length = 300

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPEQSVLDYGCGSGILAI-LAKKCGANPVYGIDIDPQAVESARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R + +         G FD++V+N
Sbjct: 212 ---RAEVIYGLPDECPTGEFDIVVAN 234


>gi|153835710|ref|ZP_01988377.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01]
 gi|148867643|gb|EDL66931.1| ribosomal protein L11 methyltransferase [Vibrio harveyi HY01]
          Length = 295

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL+ ++ NA  NGV+++ +       +  EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALQASRDNAERNGVADQLEVFLPQ--NQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|146340281|ref|YP_001205329.1| putative cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like)
           [Bradyrhizobium sp. ORS278]
 gi|146193087|emb|CAL77098.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           (Cyclopropane fatty acid synthase) (CFA synthase)
           [Bradyrhizobium sp. ORS278]
          Length = 419

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 27/140 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               RILD+G G G + L L  E       GV +S + L +A + A    +S     L  
Sbjct: 173 DPDDRILDIGCGWGGLGLYLA-ELTGADVTGVTLSTEQLHVANARAAERNLSASARFLLQ 231

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D +  V G FD IVS                V  F+          G+  Y T     + 
Sbjct: 232 D-YRDVPGTFDRIVS----------------VGMFE--------HVGVRFYDTFFRHCAE 266

Query: 216 HLNKDGLCSVE-IGYNQKVD 234
            L  DG+  +  IG ++  D
Sbjct: 267 LLKDDGVMVLHSIGRSEGPD 286


>gi|104779566|ref|YP_606064.1| hypothetical protein PSEEN0284 [Pseudomonas entomophila L48]
 gi|95108553|emb|CAK13247.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 398

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+SE+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRMLNKDGILV 335


>gi|83952379|ref|ZP_00961110.1| hypothetical protein ISM_09516 [Roseovarius nubinhibens ISM]
 gi|83836052|gb|EAP75350.1| hypothetical protein ISM_09516 [Roseovarius nubinhibens ISM]
          Length = 253

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 20/172 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT++      R      VD  L      +  R+    LDLG G G   L L    
Sbjct: 9   FLGGRLTITQPVQGYRAG----VDPVL--LAASVPAREGETALDLGCGVGVAGLCLAARV 62

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYI 175
           P     G+++      +A++NA  NG+   F+ ++ D  +  E      FD ++ NPPY 
Sbjct: 63  PGVAVTGLELQPDYAALARANATANGLP--FEVIEGDLATMPEAIKSRRFDHVLVNPPYF 120

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +         + R+     ++ G    L+ +    +  +R     G  +   
Sbjct: 121 DRKASRPAQHKGRE----TAM-GEATPLALW---VEMAARRAAPGGSVTFIH 164


>gi|330872375|gb|EGH06524.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 366

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAGEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|330448257|ref|ZP_08311905.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492448|dbj|GAA06402.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 412

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 40/230 (17%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPR-IEKRDVVRIL 102
           K+ S H  LG   +R F +  +  SS  +    ++           L R ++      +L
Sbjct: 137 KNISAHYDLGNDLYRHFLDPNMLYSSAIYLNDHDSLEQAQWNKMDRLCRQLKLTSDDHLL 196

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++GTG G + +   K     +     IS +    AK      G+S+R   L  D +  + 
Sbjct: 197 EIGTGWGGMAIHAAKHY-GCRVTTTTISEQQYLWAKQQVEQAGLSDRITLLMDD-YRDLT 254

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTI----------- 209
           G +D +VS        +++ +G +      +   SL    +GL   + I           
Sbjct: 255 GQYDKLVS------IEMIEAVGKQYLKTYIEKCQSLL-KPNGLMAIQAITIADQRYASYS 307

Query: 210 --ADGVSRHLNKDGLCSVEIGYNQKVDVVRI---FESRKLFLVNAFKDYG 254
              D + +H+   G             V  +         F++   KD G
Sbjct: 308 RSVDFIQKHIFPGGFL---------PSVTVLLDNLTQHSDFVIRDIKDIG 348


>gi|320161904|ref|YP_004175129.1| ribosomal protein L11 methyltransferase [Anaerolinea thermophila
           UNI-1]
 gi|319995758|dbj|BAJ64529.1| ribosomal protein L11 methyltransferase [Anaerolinea thermophila
           UNI-1]
          Length = 308

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 25/167 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +           ++D+G G+G + +    +      +GVDI   ++   + NA  NG
Sbjct: 153 LCMAFLEDTVIPGKPVIDVGCGSGILSIG-ALKLGASHALGVDIDQASVISTRENAEANG 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V ER +         + G F   +++ P + + I+  +                      
Sbjct: 212 VLERLEVGLGSVSEILAGNFS--LTHAPLVLANILAPV---------------------I 248

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            R    G++  ++  G   +  I   Q  DV+     + L  V   +
Sbjct: 249 IRLFDAGLADLVSPGGTVILSGILDTQAPDVLLAAAQKGLKFVEQRQ 295


>gi|313107271|ref|ZP_07793467.1| putative nucleotide methyltransferase [Pseudomonas aeruginosa
           39016]
 gi|310879969|gb|EFQ38563.1| putative nucleotide methyltransferase [Pseudomonas aeruginosa
           39016]
          Length = 374

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELTLVDESYMAVQSARENWQAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|260889028|ref|ZP_05900291.1| ribosomal protein L11 methyltransferase [Leptotrichia hofstadii
           F0254]
 gi|260861088|gb|EEX75588.1| ribosomal protein L11 methyltransferase [Leptotrichia hofstadii
           F0254]
          Length = 307

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 27/155 (17%)

Query: 57  WRDFYNVRLTLSSDTFEPRPE--------TELLVDSALAFSLPRIE------------KR 96
           W+ +++      +   +P  +          + +D  LAF     E             +
Sbjct: 109 WKKYFHTVNITDNIVIKPSWDKYEQENNEIVIEIDPGLAFGTGTHETTSLCVEFLEKYCK 168

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+G G+G + L + K+    K VG+DI  K  ++   N   N +++ F+ +  +
Sbjct: 169 SKKKLLDIGCGSGILML-IGKKLGVKKVVGIDIDEKVRDVVLENFSKNDINDNFEVIIGN 227

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
               V   +D++VSN      ++VD L   + D +
Sbjct: 228 LVDDVNEKYDLVVSN------ILVDVLEKLLEDIE 256


>gi|251791403|ref|YP_003006124.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591]
 gi|247540024|gb|ACT08645.1| ribosomal protein L11 methyltransferase [Dickeya zeae Ech1591]
          Length = 295

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 DGKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPNDLSADVVVAN 230


>gi|229077255|ref|ZP_04209949.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
 gi|228706086|gb|EEL58381.1| Methyltransferase type 11 [Bacillus cereus Rock4-18]
          Length = 175

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 41/167 (24%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVG-------VDISCKALEIAKSNAVTNGVSERFDT 152
           +ILD+GTG+G++ + L K  P     G        + S       + NA   GVS+R D 
Sbjct: 8   KILDIGTGSGSLIIKLAKTFPKSFLTGVDYWGGNWEYSKS---QCQQNAKIEGVSDRIDF 64

Query: 153 LQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           L++        +  FD IVS   +           EV+D + +               + 
Sbjct: 65  LKASAAELPFTDNEFDTIVSCLTF----------HEVKDRENKT-------------EVI 101

Query: 211 DGVSRHLNKDGLCSV------EIGYNQKVDVVRIFESRKLFLVNAFK 251
               R L   G          E  +  + +++ + + + +  +N++K
Sbjct: 102 KEALRVLKPGGKFVFLDLFMDEKIFGDEKELLNVLKKQGVSELNSYK 148


>gi|221060707|ref|XP_002261923.1| methyl transferase-like protein [Plasmodium knowlesi strain H]
 gi|193811073|emb|CAQ41801.1| methyl transferase-like protein, putative [Plasmodium knowlesi
           strain H]
          Length = 223

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 17/168 (10%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-- 123
            L  + + P  +T   ++ AL   +  I    V   L++GTG+G + L+L +     K  
Sbjct: 19  ELRKNVYLPSSDTFTFLE-ALEEDVETISP-TVHAALEMGTGSGYLILSLYELLLKRKKK 76

Query: 124 ---GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPPYIESV 178
                 +DI+ KA +  +            + + +D FS+++    FD+++ NPPY+ + 
Sbjct: 77  INLLYCLDINEKACKCVRK-LTLENKISNVEIINTDLFSNLKHCKQFDLVLFNPPYVVTE 135

Query: 179 IVDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +    + V  +       GG  G          V  +++  G+  +
Sbjct: 136 EEEMNKTDIVASY------AGGKYGREIILKFLLSVYDYVSDKGVIYL 177


>gi|157363618|ref|YP_001470385.1| ribosomal L11 methyltransferase [Thermotoga lettingae TMO]
 gi|157314222|gb|ABV33321.1| ribosomal L11 methyltransferase [Thermotoga lettingae TMO]
          Length = 268

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 26/162 (16%)

Query: 27  DSVLDDRQRFFLTNAIV------RSLKHESIHRILGWRDFYNV-RLTLSSDTFEP-RP-- 76
           D V+   Q       I       R L  +   RIL         +  +        RP  
Sbjct: 51  DKVVTRLQAKIFKKNITYSKDWFRYLAMKPF-RILNKVWIDPTGKFQVDDGIVIKMRPSA 109

Query: 77  -------ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
                   T +L    L   L     ++   +LD+G GT  + + + K     K   +D 
Sbjct: 110 AFGTGDHPTTMLCAEFLERYL-----KNSCSVLDVGCGTAVLSI-IAKRLGARKVTALDN 163

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              A+E+A+     N V    D + SD  + V G +D++V+N
Sbjct: 164 DPVAVEVARGFVRENNVE--VDVIVSDLLNGVNGEYDIVVAN 203


>gi|164424513|ref|XP_960268.2| hypothetical protein NCU07107 [Neurospora crassa OR74A]
 gi|157070546|gb|EAA31032.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 326

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 52/164 (31%), Gaps = 33/164 (20%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +     +        +    +  L      +   ILD+GTGTG   + +  E P    
Sbjct: 52  FPVDEQHLQGYDLAHEYMLILFSNKLYLAPISNPQTILDIGTGTGNWAIDIATEFPSASV 111

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
           +G DIS  A++          VS + D  Q DW     G FD+I                
Sbjct: 112 IGTDIS--AVQPT---FAPPNVSFQIDDAQLDWTFE-PGHFDLIHC-------------- 151

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEI 227
                      L GGID    +  +      HL   G    VEI
Sbjct: 152 ---------RFLYGGID---DWAKLYRQAYTHLKPGGWFQNVEI 183


>gi|66047988|ref|YP_237829.1| hypothetical protein Psyr_4764 [Pseudomonas syringae pv. syringae
           B728a]
 gi|289672466|ref|ZP_06493356.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae
           FF5]
 gi|302188128|ref|ZP_07264801.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. syringae
           642]
 gi|63258695|gb|AAY39791.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330970967|gb|EGH71033.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aceris
           str. M302273PT]
 gi|330980022|gb|EGH78288.1| SAM-dependent methyltransferase [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 398

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +             VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGIQ-AAAFGASDVTCVDASSFALDGVERNAALNGFAEKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKAAEERFDVIVADPPAFIKRKKDM-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRLLSKDGILV 335


>gi|254244490|ref|ZP_04937812.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126197868|gb|EAZ61931.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 374

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELTLVDESYMAVQSARENWQAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|300864318|ref|ZP_07109195.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300337683|emb|CBN54341.1| UbiE/COQ5 methyltransferase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 334

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 28/130 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQS 155
             +ILD GTGT  + + + +  P ++ +G+D+S   L++ + N    G+    + + + +
Sbjct: 158 AGKILDAGTGTARIPIIMRQMRPQWQVIGIDLSANMLKVGQENVEKAGMRSQIQLELIDA 217

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 +  FD++VSN       I+  L                 D L         V R
Sbjct: 218 KKMPYPDNHFDLVVSN------SIIHHLP----------------DPLPF----LAEVKR 251

Query: 216 HLNKDGLCSV 225
            L  +G   +
Sbjct: 252 VLKPNGGILL 261


>gi|297571643|ref|YP_003697417.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595]
 gi|296931990|gb|ADH92798.1| methyltransferase [Arcanobacterium haemolyticum DSM 20595]
          Length = 187

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 29/148 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  AL   L   +  D   +LDL  G+GA+ L         + +GVD + +A+    +NA
Sbjct: 28  VREALFSHLEHRDFVDGCDVLDLFAGSGALALE-ALSRGATRAIGVDSAEEAIRAMNANA 86

Query: 142 VTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
               +  +      L        +G FDVI+ +PPY              DF P  SL  
Sbjct: 87  RETQLPLKAIKSQVLTYVSQPGTDGPFDVIILDPPY--------------DF-PDDSLTA 131

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                     I   + RHL  DGL  VE
Sbjct: 132 ----------ILHELPRHLKSDGLVVVE 149


>gi|220907787|ref|YP_002483098.1| type 12 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219864398|gb|ACL44737.1| Methyltransferase type 12 [Cyanothece sp. PCC 7425]
          Length = 240

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G    +            PR E  L    A+A  LP     +   IL+LG GTG + L +
Sbjct: 9   GEVFAHTPDFDPGIRVLLPRYEEML---EAIAHCLP----SETENILELGCGTGELSLKV 61

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           L+  P  K V VD S + L  A++     G+ ER   +++D      G
Sbjct: 62  LQRCPGAKLVAVDYSPRMLAYAQTKLTAAGLGERVTWIEADMGDWATG 109


>gi|114798814|ref|YP_759410.1| hypothetical protein HNE_0681 [Hyphomonas neptunium ATCC 15444]
 gi|114738988|gb|ABI77113.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 247

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+ +LP +EK +   +L+LG G G   L      P     G+++S    ++++  A  NG
Sbjct: 36  LSAALPVLEKGE---MLELGCGCGGALLPAAYRMPGVSFTGLEVSRSVSDMSRKGAALNG 92

Query: 146 VSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVIVDC 182
              R        S+W  S E  FD + +NPPY E   +  
Sbjct: 93  FGPRVTIENTEASEWVKSHENRFDAVFANPPYFEPGKISE 132


>gi|50119218|ref|YP_048385.1| ribosomal protein L11 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
 gi|60390386|sp|Q6DAJ5|PRMA_ERWCT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|49609744|emb|CAG73178.1| ribosomal protein L11 methyltransferase [Pectobacterium
           atrosepticum SCRI1043]
          Length = 295

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTIIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPADLSADVVVAN 230


>gi|296391432|ref|ZP_06880907.1| hypothetical protein PaerPAb_24899 [Pseudomonas aeruginosa PAb1]
          Length = 374

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELTLVDESYMAVQSARENWQAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|291619002|ref|YP_003521744.1| YgjO [Pantoea ananatis LMG 20103]
 gi|291154032|gb|ADD78616.1| YgjO [Pantoea ananatis LMG 20103]
          Length = 386

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 24/137 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
           +  + +     I+DLG G G + L  L ++P  +   +D S  A+  ++ N   N   + 
Sbjct: 232 MQHLPENIEGEIVDLGCGNGVIGLMALAQNPEAEVHFLDESYMAVASSRLNVEVNRPDDL 291

Query: 149 -RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R     ++  S         ++ NPP+ +          V D    ++           
Sbjct: 292 SRCQFRVNNVLSGYPSDTLHAVLCNPPFHQ-------QHAVTDH---LAW---------- 331

Query: 207 RTIADGVSRHLNKDGLC 223
             +     R L   G  
Sbjct: 332 -QMFRDAKRCLQYGGEL 347


>gi|313897900|ref|ZP_07831441.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
 gi|312957435|gb|EFR39062.1| putative 23S rRNA m5C1962 methyltransferase [Clostridium sp. HGF2]
          Length = 410

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TG+  L   K         VDIS  A+++A+ +A  NG+ ER     +D
Sbjct: 235 KGKHVLDCFTHTGSFALNAAK-GGAAHVHAVDISQTAIDMAQHHADINGLQERMSFETAD 293

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  ++ L      +D+I+ +PP   +   + +   V+                 YR I 
Sbjct: 294 VFDLLKALKKQPRVYDMIILDPPAF-TKSRETISHAVKG----------------YREIN 336

Query: 211 DGVSRHLNKDGLCS 224
               + L + G  +
Sbjct: 337 TAAMKLLPRGGYLA 350


>gi|218463249|ref|ZP_03503340.1| ribosomal protein L11 methyltransferase [Rhizobium etli Kim 5]
          Length = 292

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 140 LEVIDRVVRSRRVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATRVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N   +   ++                     
Sbjct: 199 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN--ILARPLI--------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  ++ HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 236 ------RMAPQLAAHLAPGGSVILSGILAAQRWKVIAAYSGARLRHVRTI 279


>gi|167462022|ref|ZP_02327111.1| cobalt-precorrin-6Y C(15)-methyltransferase [Paenibacillus larvae
           subsp. larvae BRL-230010]
 gi|322384872|ref|ZP_08058533.1| hypothetical protein PL1_1116 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321150341|gb|EFX43843.1| hypothetical protein PL1_1116 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 179

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 49/160 (30%), Gaps = 36/160 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  R LD+G GTG+V L + +  P      ++ S +AL + + N     + E  D + +
Sbjct: 18  GNSRRFLDVGAGTGSVALQVARMFPHVSVTAIERSGEALALIEQNRHQL-LLENVDIISA 76

Query: 156 DWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +    +E   FD I                             GG  G      I D   
Sbjct: 77  EAPIPLENTVFDAI---------------------------FIGGSGG--KLAEIIDWSH 107

Query: 215 RHLNKDGLCSVEIGYNQKVDV---VRIFESRKLFLVNAFK 251
             L   G   +   +    +V       E      V   +
Sbjct: 108 TLLKPGGQLVL--NFILAENVLEAAACLEKGPWHEVEVIQ 145


>gi|158335894|ref|YP_001517068.1| methyltransferase [Acaryochloris marina MBIC11017]
 gi|158306135|gb|ABW27752.1| methyltransferase, putative [Acaryochloris marina MBIC11017]
          Length = 284

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 71/205 (34%), Gaps = 25/205 (12%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G  DFY+ R    S +++       + D  L ++     +     +LD+GTGTG + +A 
Sbjct: 12  GVADFYDRR----SRSYDQGQWHPQICDRLLEYARIGAGQ----TVLDIGTGTGYLAIAS 63

Query: 116 LKESPFF-KGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVS--N 171
            +         GVDIS   L+ A+      G+ +       ++        FDVI+    
Sbjct: 64  AQRVGDQGHVTGVDISPGMLQQAQRKIQRLGLSNVVVQRADAEALDYPSHHFDVILCAHT 123

Query: 172 PPYIESVIVDCLGLEVRDFDP--RISLDGGID----GLSHYRTIADGVSRHLNKDGLCSV 225
            P++ +     L L  +   P  RI++    D    G    R +       L        
Sbjct: 124 FPWM-TDKAATLRLWYQLLKPRGRIAVHTPADTAYIGAVVLRRVLAEYGLELEPSNRL-- 180

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAF 250
                      ++FE      V  +
Sbjct: 181 ----GSIEQCRQLFEKAGFEAVEIY 201


>gi|117164442|emb|CAJ87987.1| putative methyltransferase [Streptomyces ambofaciens ATCC 23877]
          Length = 290

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 29/134 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+L+LG G GA  + LL+ SP    V VD S ++L  A+++        R +   +
Sbjct: 46  PAGSRVLELGCGVGAQTVHLLRSSPGAHIVAVDQSEESLAQARTHVAGIAPEARVEWHHA 105

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGV 213
           D                P+ ++         V +   DPR +L G              +
Sbjct: 106 DVLE------------LPFADAEFDHVFVCFVLEHLPDPRRALAG--------------L 139

Query: 214 SRHLNKDGLC-SVE 226
            R L   G    +E
Sbjct: 140 RRVLRPGGTITVIE 153


>gi|27904799|ref|NP_777925.1| ribosomal RNA small subunit methyltransferase C [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38503321|sp|Q89AI2|RSMC_BUCBP RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|27904197|gb|AAO27030.1| ribosomal RNA small subunit methyltransferase C [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 326

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 24/122 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G +   L    P  K   +D +  ALE +K    +N V    +   S+ +S+
Sbjct: 185 VLDIGCGSGVLSTYLATIFPEIKLTLIDSNIAALESSKLTLTSNNVCG--EIFPSNIYSN 242

Query: 161 VEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V    FD+I+SNPP      ++                      S    I     ++L+ 
Sbjct: 243 VHYQNFDLIISNPPLHVENKLN---------------------FSIIDNIIKNSVKYLSN 281

Query: 220 DG 221
            G
Sbjct: 282 KG 283


>gi|15669849|ref|NP_248663.1| hypothetical protein MJ_1653 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3334439|sp|Q59047|Y1653_METJA RecName: Full=Putative ribosomal RNA large subunit
           methyltransferase MJ1653
 gi|1500554|gb|AAB99674.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 385

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 9/94 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL++A+ N   N +  +R++ ++
Sbjct: 211 KEGDRVLDICCYTGGFSVHAAIR--GAEVVGVDLSKKALKLAEENMELNNIPKDRYEFIE 268

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVDC 182
            + F  +E        FDV++ +PP         
Sbjct: 269 GNAFKVMEEFIEDGEKFDVVILDPPAFAQSKKAL 302


>gi|325518405|gb|EGC98123.1| ribosomal protein L11 methyltransferase [Burkholderia sp. TJI49]
          Length = 300

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGANPVVGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R D       +   G FD++V+N
Sbjct: 212 ---RADVTYGLPDACPAGEFDIVVAN 234


>gi|237741752|ref|ZP_04572233.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256845080|ref|ZP_05550538.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294785634|ref|ZP_06750922.1| DNA methylase [Fusobacterium sp. 3_1_27]
 gi|229429400|gb|EEO39612.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256718639|gb|EEU32194.1| methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294487348|gb|EFG34710.1| DNA methylase [Fusobacterium sp. 3_1_27]
          Length = 243

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 80/192 (41%), Gaps = 27/192 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+++   SD F    ++ L+ +           +++  +ILDLGTG  A+ L L K++  
Sbjct: 15  NLKIIQRSDYFNFSIDSLLISEFVNI-------QKNTKKILDLGTGNAAIPLFLSKKT-S 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYIES 177
            K  G++I   +  +A  N   N ++E+   +  +  + ++      FD+I+SNPP+ + 
Sbjct: 67  AKIYGIEIQEISYNLALRNININNLNEQIYIIYDNMKNYLKYFNMSFFDIIISNPPFFKI 126

Query: 178 VI-----VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232
                   +   L +   +  I LD           +    S  +   G   +    ++ 
Sbjct: 127 NENVNFLNNLEQLSIARHEVEIDLD----------ELIKISSELVKDRGYFYLVHRADRL 176

Query: 233 VDVVRIFESRKL 244
            +++ I +  K 
Sbjct: 177 SEILNILQKYKF 188


>gi|15607700|ref|NP_215074.1| benzoquinone methyltransferase [Mycobacterium tuberculosis H37Rv]
 gi|15839958|ref|NP_334995.1| hypothetical protein MT0586 [Mycobacterium tuberculosis CDC1551]
 gi|31791742|ref|NP_854235.1| benzoquinone methyltransferase [Mycobacterium bovis AF2122/97]
 gi|121636478|ref|YP_976701.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148660329|ref|YP_001281852.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis
           H37Ra]
 gi|148821761|ref|YP_001286515.1| benzoquinone methyltransferase [Mycobacterium tuberculosis F11]
 gi|167968367|ref|ZP_02550644.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis H37Ra]
 gi|215402326|ref|ZP_03414507.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|215410097|ref|ZP_03418905.1| benzoquinone methyltransferase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215425795|ref|ZP_03423714.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|215429392|ref|ZP_03427311.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|215444670|ref|ZP_03431422.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T85]
 gi|218752198|ref|ZP_03530994.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|219556396|ref|ZP_03535472.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|224988950|ref|YP_002643637.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797492|ref|YP_003030493.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           1435]
 gi|254230903|ref|ZP_04924230.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C]
 gi|254363519|ref|ZP_04979565.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254549515|ref|ZP_05139962.1| benzoquinone methyltransferase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185434|ref|ZP_05762908.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|260199563|ref|ZP_05767054.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|260203717|ref|ZP_05771208.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289441945|ref|ZP_06431689.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|289446107|ref|ZP_06435851.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|289552812|ref|ZP_06442022.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|289568488|ref|ZP_06448715.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|289573152|ref|ZP_06453379.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289744273|ref|ZP_06503651.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|289749059|ref|ZP_06508437.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|289752599|ref|ZP_06511977.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289756637|ref|ZP_06516015.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289760679|ref|ZP_06520057.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|294996070|ref|ZP_06801761.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 210]
 gi|297633050|ref|ZP_06950830.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           4207]
 gi|297730027|ref|ZP_06959145.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           R506]
 gi|313657355|ref|ZP_07814235.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           V2475]
 gi|2114022|emb|CAB08971.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium
           tuberculosis H37Rv]
 gi|13880098|gb|AAK44809.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|31617328|emb|CAD93437.1| POSSIBLE BENZOQUINONE METHYLTRANSFERASE (METHYLASE) [Mycobacterium
           bovis AF2122/97]
 gi|121492125|emb|CAL70590.1| POssible benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124599962|gb|EAY58972.1| hypothetical protein TBCG_00555 [Mycobacterium tuberculosis C]
 gi|134149033|gb|EBA41078.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148504481|gb|ABQ72290.1| putative benzoquinone methyltransferase [Mycobacterium tuberculosis
           H37Ra]
 gi|148720288|gb|ABR04913.1| hypothetical benzoquinone methyltransferase [Mycobacterium
           tuberculosis F11]
 gi|224772063|dbj|BAH24869.1| putative benzoquinone methyltransferase [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318995|gb|ACT23598.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           1435]
 gi|289414864|gb|EFD12104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T46]
 gi|289419065|gb|EFD16266.1| benzoquinone methyltransferase [Mycobacterium tuberculosis CPHL_A]
 gi|289437444|gb|EFD19937.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN 605]
 gi|289537583|gb|EFD42161.1| benzoquinone methyltransferase [Mycobacterium tuberculosis K85]
 gi|289542242|gb|EFD45890.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T17]
 gi|289684801|gb|EFD52289.1| benzoquinone methyltransferase [Mycobacterium tuberculosis 02_1987]
 gi|289689646|gb|EFD57075.1| benzoquinone methyltransferase [Mycobacterium tuberculosis T92]
 gi|289693186|gb|EFD60615.1| benzoquinone methyltransferase [Mycobacterium tuberculosis EAS054]
 gi|289708185|gb|EFD72201.1| benzoquinone methyltransferase [Mycobacterium tuberculosis GM 1503]
 gi|289712201|gb|EFD76213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|326902389|gb|EGE49322.1| benzoquinone methyltransferase [Mycobacterium tuberculosis W-148]
 gi|328457277|gb|AEB02700.1| benzoquinone methyltransferase [Mycobacterium tuberculosis KZN
           4207]
          Length = 241

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
               EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D
Sbjct: 44  WSIGEPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERGHTT--VGLD 91

Query: 129 ISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  A+E+A+  A   G++   F+   +  F+  +G FD IV      +S +   + +E 
Sbjct: 92  LSPAAVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV------DSTLFHSMPVES 145

Query: 188 RD 189
           R+
Sbjct: 146 RE 147


>gi|290890484|ref|ZP_06553559.1| hypothetical protein AWRIB429_0949 [Oenococcus oeni AWRIB429]
 gi|290479880|gb|EFD88529.1| hypothetical protein AWRIB429_0949 [Oenococcus oeni AWRIB429]
          Length = 330

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +     K   + + D G GTG + L    E+P  K   ++ + +  ++ +   
Sbjct: 32  IDAFLIANFIDKSKSQRLLLADFGAGTGIIGLLYAIENPG-KVFLIENNSQLSQLEEKTV 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYI--ESVIVDCLGLEVRDFDPRI 194
             N + +R   +  D  ++++G F     D IVSNPPY    +     L  E R      
Sbjct: 91  GLNDLKKRVTVINQDI-NNLDGTFQLNSLDAIVSNPPYFDSPNYSKKNLSKE-RSHARHE 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                   L+    +     + L   G         +  D + +      
Sbjct: 149 ----ENFDLAV---LVSQSKKFLKSKGKLYFIYRAERIADFIDLLIKNGF 191


>gi|239631336|ref|ZP_04674367.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301066634|ref|YP_003788657.1| putative O-methyltransferase [Lactobacillus casei str. Zhang]
 gi|239525801|gb|EEQ64802.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300439041|gb|ADK18807.1| Predicted O-methyltransferase [Lactobacillus casei str. Zhang]
          Length = 247

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 23/183 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N+++  SS  F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 18  RNIKIIQSSAVFSFSLDAVLLANFA--------QVKRHSRVVDLAAGNGAVGLFLARDT- 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++AK +   N +         D   +     +   D++  NPPY +
Sbjct: 69  DQQVTMVELQPRLADMAKRSVELNQLQ-NVTVQVGDLADATQMVAKDSVDIVTCNPPYFK 127

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            ++L           T+A   +  L   G         +   + 
Sbjct: 128 VSSQSITNPN-----DHLALARHELTTDFA-TVARVSADLLKYQGKAFYVH---RPERLA 178

Query: 237 RIF 239
            + 
Sbjct: 179 ELL 181


>gi|116491004|ref|YP_810548.1| O-methyltransferase [Oenococcus oeni PSU-1]
 gi|116091729|gb|ABJ56883.1| Predicted O-methyltransferase [Oenococcus oeni PSU-1]
          Length = 330

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +     K   + + D G GTG + L    E+P  K   ++ + +  ++ +   
Sbjct: 32  IDAFLIANFIDKSKSQRLLLADFGAGTGIIGLLYAIENPG-KVFLIENNSQLSQLEEKTV 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYI--ESVIVDCLGLEVRDFDPRI 194
             N + +R   +  D  ++++G F     D IVSNPPY    +     L  E R      
Sbjct: 91  GLNDLKKRVTVINQDI-NNLDGTFQLNSLDAIVSNPPYFDSPNYSKKNLSKE-RSHARHE 148

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                   L+    +     + L   G         +  D + +      
Sbjct: 149 ----ENFDLAV---LVSQSKKFLKSKGKLYFIYRAERIADFIDLLIKNGF 191


>gi|116052770|ref|YP_793087.1| hypothetical protein PA14_61220 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254244481|ref|ZP_04937803.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296391446|ref|ZP_06880921.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas
           aeruginosa PAb1]
 gi|122257219|sp|Q02G49|RSMC_PSEAB RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|115587991|gb|ABJ14006.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126197859|gb|EAZ61922.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 332

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G G +   L +  P  +   +D+   A+E ++     NG+    + + +D
Sbjct: 191 PGGHLLDFGCGAGVLGAVLKRRYPASRLTLLDVDAFAVESSRLTLAANGLDG--EVIAAD 248

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                      IVSNPP+ + V  D    E                      +    + H
Sbjct: 249 GIDGAPRELAAIVSNPPFHQGVHTDYQASE---------------------RLLQRAAEH 287

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 288 LAPGGEL 294


>gi|327382614|gb|AEA54090.1| hypothetical protein LC2W_1758 [Lactobacillus casei LC2W]
 gi|327385810|gb|AEA57284.1| hypothetical protein LCBD_1788 [Lactobacillus casei BD-II]
          Length = 247

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 23/183 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N+++  SS  F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 18  RNIKIIQSSAVFSFSLDAVLLANFA--------QVKRHSRVVDLAAGNGAVGLFLARDT- 68

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++AK +   N +         D   +     +   D++  NPPY +
Sbjct: 69  DQQVTMVELQPRLADMAKRSVALNQLQ-NVTVQVGDLADATQMVAKDSVDIVTCNPPYFK 127

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            ++L           T+A   +  L   G         +   + 
Sbjct: 128 VSSQSITNPN-----DHLALARHELTTDFA-TVARVSADLLKYQGKAFYVH---RPERLA 178

Query: 237 RIF 239
            + 
Sbjct: 179 ELL 181


>gi|313884344|ref|ZP_07818106.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620422|gb|EFR31849.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 456

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 72/203 (35%), Gaps = 39/203 (19%)

Query: 56  GWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           G   ++     +   +S  +F     P+ E L   ALA +    +     R+LD   G G
Sbjct: 265 GQATYHDQMLGLDFEISGQSFYQVNTPQAEELYRLALAAA----DLHGHERVLDAYCGIG 320

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVI 168
            + LAL +++   +   ++I  +A+E+AK NA  N + +  F+           G  +VI
Sbjct: 321 TISLALAQQAK--EVYAMEIVPQAIEMAKFNAQANALTNVHFEA----------GKAEVI 368

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                 +       L  +V   DP         GL   RT  D +   LN   +  V   
Sbjct: 369 ------LPKWQEQGLDFDVAVVDPPR------KGLD--RTFVDTLID-LNPGKIVYVSCN 413

Query: 229 YNQKVDVVRIFESRKLFLVNAFK 251
                    IF       V   K
Sbjct: 414 PATCARDCAIFAEAGY-EVKTIK 435


>gi|197105763|ref|YP_002131140.1| ribosomal RNA small subunit methyltransferase C [Phenylobacterium
           zucineum HLK1]
 gi|196479183|gb|ACG78711.1| ribosomal RNA small subunit methyltransferase C [Phenylobacterium
           zucineum HLK1]
          Length = 304

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 38/168 (22%)

Query: 62  NVRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++ L      F    P P + LL+      +LP +  R      DLG G G +  A+L  
Sbjct: 136 SLGLWTQPGVFSWDRPDPGSVLLIQ-----ALPPLAGRGA----DLGCGLGILSHAVLAS 186

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
               +   VD+  +A++ A+ N        R      D  +  E    D +V NPP+ ++
Sbjct: 187 PQVTELALVDLDRRAVDCARRNVQ----DSRAGFHWRDARTGPELAGLDFVVMNPPFHDA 242

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              D             +L     G +  R         L K G+  +
Sbjct: 243 GAEDK------------AL-----GQAFIRR----AHAVLRKGGVLWL 269


>gi|302884878|ref|XP_003041333.1| hypothetical protein NECHADRAFT_52439 [Nectria haematococca mpVI
           77-13-4]
 gi|256722233|gb|EEU35620.1| hypothetical protein NECHADRAFT_52439 [Nectria haematococca mpVI
           77-13-4]
          Length = 305

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 47/151 (31%), Gaps = 35/151 (23%)

Query: 78  TELLVDSALAFSLPRIE-KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              L    L   L +         +LD+G GTG   + +    P  + VGVD+S      
Sbjct: 51  IHELFRIVLDGKLYKAPIGDHPQDVLDIGCGTGIWAIEMADLHPGAEVVGVDLSPI---- 106

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            + N V        D +  DW    E  FD+I           +  +   V D+      
Sbjct: 107 -QPNFVPPNCKFEVDDINKDWTFP-ENKFDLI----------HIRYMTGTVPDW------ 148

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                       +   V +HL   G   VE 
Sbjct: 149 ----------TELLKKVHKHLKPGGW--VEH 167


>gi|209966251|ref|YP_002299166.1| SAM-dependent methyltransferase, putative [Rhodospirillum centenum
           SW]
 gi|209959717|gb|ACJ00354.1| SAM-dependent methyltransferase, putative [Rhodospirillum centenum
           SW]
          Length = 426

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 24/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D  T TG   + L           VD S  AL+IA   A  NG ++R +  ++D F 
Sbjct: 254 RTIDFYTYTGGFGV-LAAARGAAHVTLVDRSQAALDIALKAAAANGCADRVEARKADAFH 312

Query: 160 SVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +E        ++V++ +PP       D                    G   YR +    
Sbjct: 313 ELEKLVAEGQRWEVVICDPPAFVKSRKDLAV-----------------GSRAYRKMTKAA 355

Query: 214 SRHLNKDGLCSV 225
           +R     G+  V
Sbjct: 356 ARLTAPGGMLLV 367


>gi|220906460|ref|YP_002481771.1| type 12 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219863071|gb|ACL43410.1| Methyltransferase type 12 [Cyanothece sp. PCC 7425]
          Length = 389

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD+GTGTG +   L  +    K  G+D S +A+ +A+  A  NG ++R + +Q 
Sbjct: 35  KPGSVVLDIGTGTG-IAALLACQFGAQKVYGIDPS-EAICVAQKIARANGYADRIEFIQG 92

Query: 156 DWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                S+    DV+VS         +  +   ++   P          L   R       
Sbjct: 93  LSTQISLPEPVDVVVS--------DLRGILPPLQHHIP---------SLKDARQ------ 129

Query: 215 RHLNKDGLCS 224
           R L   G+  
Sbjct: 130 RLLKPGGVLI 139


>gi|84622297|ref|YP_449669.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
 gi|84366237|dbj|BAE67395.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 355

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 32/198 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P   
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVT 231

Query: 124 G-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                +   +AL +A+ N        +      D  + +   +D IVSNPP+      D 
Sbjct: 232 VLDLYEAQARALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADR 291

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV----- 233
                                   +      ++ L   G   +     + Y Q +     
Sbjct: 292 P--------------------DIGQRFIAVAAQALRPGGQLLLVANRHLPYEQVLNESFG 331

Query: 234 DVVRIFESRKLFLVNAFK 251
            V    E     L++A +
Sbjct: 332 QVRVAAERDGFKLISAIR 349


>gi|188578739|ref|YP_001915668.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae PXO99A]
 gi|188523191|gb|ACD61136.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae PXO99A]
          Length = 336

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 32/198 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P   
Sbjct: 153 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVT 212

Query: 124 G-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                +   +AL +A+ N        +      D  + +   +D IVSNPP+      D 
Sbjct: 213 VLDLYEAQARALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADR 272

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV----- 233
                                   +      ++ L   G   +     + Y Q +     
Sbjct: 273 P--------------------DIGQRFIAVAAQALRPGGQLLLVANRHLPYEQVLNESFG 312

Query: 234 DVVRIFESRKLFLVNAFK 251
            V    E     L++A +
Sbjct: 313 QVRVAAERDGFKLISAIR 330


>gi|320334411|ref|YP_004171122.1| trans-aconitate 2-methyltransferase [Deinococcus maricopensis DSM
           21211]
 gi|319755700|gb|ADV67457.1| Trans-aconitate 2-methyltransferase [Deinococcus maricopensis DSM
           21211]
          Length = 257

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 32/157 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+     L  + +     I+DLG GTG     L ++ P  +  G+D S + LE A+    
Sbjct: 16  DAPARDLLQLLPEAPYRAIIDLGCGTGDHTATLAQQHPDAQVTGLDSSAEMLERAR---T 72

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  +  F         ++ G +D+I SN                  + P  +       
Sbjct: 73  HHQPNLHFTL---GAIQALHGTYDLIFSNA--------------ALQWLPDHA------- 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 +  G+  HL   G  +V++  N   D  R+ 
Sbjct: 109 -----ALLAGLWTHLRPGGTLAVQVPSNHSHDSHRLL 140


>gi|228477939|ref|ZP_04062552.1| ribosomal protein L11 methyltransferase [Streptococcus salivarius
           SK126]
 gi|228250332|gb|EEK09577.1| ribosomal protein L11 methyltransferase [Streptococcus salivarius
           SK126]
          Length = 317

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPGMENIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    D+IV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQEADIIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +   I       V    E    FL
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVRASAEKAGFFL 291


>gi|225710376|gb|ACO11034.1| Methyltransferase-like protein 5 [Caligus rogercresseyi]
          Length = 210

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 13/107 (12%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKESPFFKGVGVDISCKA 133
           P +  +    L  +    +  + + I DLG+GTG  A+  + L           +I   A
Sbjct: 28  PTSAHIASRLLYTAQHSYQDIEDLHIADLGSGTGMLAIGASCLDAGA---VTAFEIDPDA 84

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPY 174
           +E+A +NA  + +S   D +  D  SS   +       D ++ NPP+
Sbjct: 85  IEVASNNA--SELSNNIDFVCMDVLSSFNHMKSPSISVDTVIMNPPF 129


>gi|170751715|ref|YP_001757975.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
 gi|170658237|gb|ACB27292.1| methyltransferase small [Methylobacterium radiotolerans JCM 2831]
          Length = 252

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 57/161 (35%), Gaps = 16/161 (9%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           PR       D+ L   L  +  R   R+ D+G GTGAV LA    +P  +   V+     
Sbjct: 23  PRGAHRAGTDAVLLARL--LAPRAGDRLCDVGAGTGAVGLACAALAPGLRPTLVERDPAL 80

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSS-------VEGLFDVIVSNPPYIESVIVDCLGLE 186
              A++NA  NG+  R         ++       +   FDV+++NPP+  +         
Sbjct: 81  AGQARANATLNGIDARVLVADVLASAAERRAAGLLPDSFDVVLTNPPFFAAGAHRASPHP 140

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            R          G D  S  RT        L   G   +  
Sbjct: 141 GRA---AAHTFAGGDLDSWIRTCTA----ILRAGGRLGLIH 174


>gi|158302788|dbj|BAF85841.1| C5-O-methyltransferase [Streptomyces cyaneogriseus subsp.
           noncyanogenus]
          Length = 284

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 26/144 (18%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L D  +         R V R+LD+G G+G   L L    P    VG+ IS + +E+A + 
Sbjct: 55  LTDHMIGKLREHT-GRPVRRVLDVGCGSGRPALRLAHSEP-VDIVGITISPRQVELATAL 112

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A  +G++ R     +D                P+ ++       LE     P  +     
Sbjct: 113 AERSGLANRVRFECADAMD------------LPFPDASFDAVWALECLLHMPDPA----- 155

Query: 201 DGLSHYRTIADGVSRHLNKDGLCS 224
                   +   ++R L   G  +
Sbjct: 156 -------RVFQEMARVLRPGGRLA 172


>gi|85702997|ref|ZP_01034101.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
           217]
 gi|85671925|gb|EAQ26782.1| Cyclopropane-fatty-acyl-phospholipid synthase CfaS [Roseovarius sp.
           217]
          Length = 423

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            R   + S H  LG  +FY++ L    T SS  F+P   +      A  A  + ++  + 
Sbjct: 150 ARR--NISYHYDLGN-EFYSLWLDETMTYSSAIFQPGQNSLEQAQIAKYASMVDQMGVKP 206

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       KE    +  G+ IS + L+ A+      G+S+R      D+
Sbjct: 207 GDHVLEIGCGWGGFAEYAAKER-GLRVTGLTISAEQLKYARDRMARAGLSDRVTLKLQDY 265

Query: 158 FSSVEGLFDVIVS 170
                G +D I S
Sbjct: 266 RDE-RGTYDGIAS 277


>gi|329765741|ref|ZP_08257310.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137807|gb|EGG42074.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 221

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 49/138 (35%), Gaps = 31/138 (22%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           +    + K     ILDL  GTG +   + K  P  + VGVDI+   L++AK N   +G  
Sbjct: 34  WKRQIVSKISGGMILDLACGTGILSRMIAK-IPNSEVVGVDITQSYLDVAKKN---SGFD 89

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                L+      ++  FD IVS+  YI                               R
Sbjct: 90  NISYVLEDAEKLDLDKKFDFIVSS--YIPK-------------------------YCDAR 122

Query: 208 TIADGVSRHLNKDGLCSV 225
           T+      HLN  G   +
Sbjct: 123 TLIAKCMAHLNPGGQIIL 140


>gi|289193240|ref|YP_003459181.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
 gi|288939690|gb|ADC70445.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
          Length = 277

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
            + I    K +   +I   ++F+  +L++ S     R         A+      +E    
Sbjct: 15  WDKIKAERKGKP--KITYDKEFFK-KLSIDSSNIIKRNNYGY-GKKAVEILKENLEGFSN 70

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +L++GTG G + + L KE    K + ++ S   + + K N   NG+ E  + + +DW 
Sbjct: 71  FTVLEIGTGAGTLTIPLAKEVK--KVIAIEKSEMNIRLLKENLRENGI-ENVEIINADWN 127

Query: 159 S-SVEGLFDVIVS 170
           S  ++  FD++V 
Sbjct: 128 SIDIDDKFDLVVC 140


>gi|225022944|ref|ZP_03712136.1| hypothetical protein CORMATOL_02990 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305681942|ref|ZP_07404746.1| putative site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium matruchotii ATCC 14266]
 gi|224944167|gb|EEG25376.1| hypothetical protein CORMATOL_02990 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305658415|gb|EFM47918.1| putative site-specific DNA-methyltransferase (adenine-specific)
           [Corynebacterium matruchotii ATCC 14266]
          Length = 571

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 26/205 (12%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-- 122
           + +    + P    E L D  +A +      R  + I+D   G G + +A+ +       
Sbjct: 12  VKVHGQHYTPPELAEFLADHIVAAA---DLDRPELTIIDPACGDGELLVAVARSLKDAGY 68

Query: 123 ----KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
               K +G DI   A+E A+  A    V+     +Q D+      L     D+I++NPPY
Sbjct: 69  LGILKLIGYDIDAAAVEQAR--ARLRDVNRDAQVIQGDFLLHQRNLPTHSVDIIITNPPY 126

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ--- 231
           + +  +     ++   +    L G +D            SR L   G   +         
Sbjct: 127 VRTQNLGHETAQLLAEEFH--LTGRVD---LTHPFVAASSRLLTAHGTLGLLCSNRFLTT 181

Query: 232 --KVDVVRIFESRKLFLVNAFKDYG 254
               ++ R F +  L +   + D G
Sbjct: 182 LAGENIRRTFMAGDLHIAELY-DLG 205


>gi|46199805|ref|YP_005472.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus
           thermophilus HB27]
 gi|61217295|sp|Q72HI4|UBIE_THET2 RecName: Full=Menaquinone biosynthesis methyltransferase ubiE
 gi|46197432|gb|AAS81845.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE [Thermus
           thermophilus HB27]
          Length = 220

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 26/131 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++   RILDL TGTG + L L + +P  + VG D +   L IA+  A   G+  RF    
Sbjct: 34  EKAPKRILDLATGTGDLALMLKERAPGAEVVGADFAPPMLAIARRKAEARGLEVRFLEAD 93

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +G FD +              +    R+F             + Y      + 
Sbjct: 94  ALALPFPDGAFDAV-------------TIAFGFRNF-------------ADYEKALGELY 127

Query: 215 RHLNKDGLCSV 225
           R L   G   V
Sbjct: 128 RVLAPGGRLVV 138


>gi|332673748|gb|AEE70565.1| adenine specific DNA methyltransferase [Helicobacter pylori 83]
          Length = 386

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K +   +L+  TG G    + LK   
Sbjct: 6   YQLNIKTLGQVFTPKK----IVDFMLTL------KHNQGSVLEPSTGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|332524676|ref|ZP_08400875.1| cyclopropane-fatty-acyl-phospholipid synthase [Rubrivivax
           benzoatilyticus JA2]
 gi|332107984|gb|EGJ09208.1| cyclopropane-fatty-acyl-phospholipid synthase [Rubrivivax
           benzoatilyticus JA2]
          Length = 407

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L     R   R+L++G G GAV  A   E    +  GV +S + L  A+      G
Sbjct: 179 VRRALRECGVRAGDRVLEIGCGWGAVAEAATNEF-GARVTGVTLSTEQLAYARERLARLG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  + D    D+    +G FD +VS
Sbjct: 238 LGTQADLRLQDYRDIQDGPFDAVVS 262


>gi|302853268|ref|XP_002958150.1| hypothetical protein VOLCADRAFT_99370 [Volvox carteri f.
           nagariensis]
 gi|300256511|gb|EFJ40775.1| hypothetical protein VOLCADRAFT_99370 [Volvox carteri f.
           nagariensis]
          Length = 441

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 30/134 (22%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LD+G G G +   L  ++   + V VD S  A++ A+     NG+S++   +   
Sbjct: 114 EGRTVLDVGCGLGLLS-MLAAKAGAARVVAVDGSEGAVDAARRIIKANGLSDKITVVHGV 172

Query: 157 W--FSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
                 + G+    FDV++SN           +G          +L GG  G+    T+A
Sbjct: 173 LEELDELPGMSPSGFDVVMSN----------WMGP---------ALLGG--GMMA--TLA 209

Query: 211 DGVSRHLNKDGLCS 224
             + + L   G+  
Sbjct: 210 HAIKKWLRPGGVVL 223


>gi|280987258|gb|ADA00409.1| microcystin synthetase [Microcystis aeruginosa NPLJ-4]
          Length = 442

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 54/256 (21%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         E I  I+GW  
Sbjct: 10  SQTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSEGIFNIVGWNS 69

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 70  SYTGEP-------IPTAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVAPHC 118

Query: 120 PFFKGVGVDISCKALE-IAKSNAVTNGV-SERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
             +   G DIS  AL+ I + N     +   R  T  +D F  +E   FD I+ N     
Sbjct: 119 QHY--WGTDISSVALDHIQRINQEGPKLEQIRLFTRTADNFEGLESEGFDTIILN----- 171

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     V  + P I          +   + +G  + L   G   +        DV 
Sbjct: 172 ---------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GDVR 206

Query: 237 RI-FESRKLFLVNAFK 251
            +   +     V  +K
Sbjct: 207 NLQLMAAFHADVELYK 222


>gi|238761148|ref|ZP_04622125.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia kristensenii ATCC 33638]
 gi|238761401|ref|ZP_04622377.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia kristensenii ATCC 33638]
 gi|238700375|gb|EEP93116.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia kristensenii ATCC 33638]
 gi|238700628|gb|EEP93368.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia kristensenii ATCC 33638]
          Length = 176

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+       ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 4   EAVRVLALERLALSGATHLIDVGAGTGSVALEAALRFPHLQVTAIECNPTALELIDENRQ 63

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G     + L      ++    D I                             GG  G
Sbjct: 64  RLGCG-NVNILAGVAPLALPDKADAI---------------------------FIGGSGG 95

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN DG   +
Sbjct: 96  --HLTDLIDWALMMLNPDGRLVL 116


>gi|163735095|ref|ZP_02142531.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
           litoralis Och 149]
 gi|161391553|gb|EDQ15886.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
           litoralis Och 149]
          Length = 402

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 9/147 (6%)

Query: 30  LDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDS 84
           L +R RF+L      ++ K+ S H  LG  DFY + L    T SS  FE   E+     +
Sbjct: 113 LFERLRFWLQRNHKAQARKNISYHYDLGN-DFYGLWLDDSMTYSSALFETGQESLEAAQT 171

Query: 85  ALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           A    +   I  +    IL++G G G       KE    +   + IS +  + AK     
Sbjct: 172 AKYKLMVDEIGAKPGDHILEIGCGWGGFAEYAAKER-GLRVTCLTISEEQFKYAKERIEK 230

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVS 170
            G+S+  D    D+     G +D I S
Sbjct: 231 AGLSDLVDFKLQDYRDE-SGSYDGIAS 256


>gi|156972541|ref|YP_001443448.1| ribosomal protein L11 methyltransferase [Vibrio harveyi ATCC
           BAA-1116]
 gi|166223500|sp|A7MXI3|PRMA_VIBHB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|156524135|gb|ABU69221.1| hypothetical protein VIBHAR_00173 [Vibrio harveyi ATCC BAA-1116]
          Length = 295

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL+ ++ NA  NGV+ + +       +  EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALQASRDNAERNGVANQLEVFLPQ--NQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|121716649|ref|XP_001275870.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL
           1]
 gi|119404027|gb|EAW14444.1| TAM domain methyltransferase, putative [Aspergillus clavatus NRRL
           1]
          Length = 335

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 50/149 (33%), Gaps = 33/149 (22%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LL+   L  +          RILD+GTGTG   L +  + P  + VG D+S      A 
Sbjct: 79  KLLLGGDLYRAPILANDTSPKRILDVGTGTGIWALEMADDFPDAEIVGTDLSPIQPSWAP 138

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            N          D  +SDW  + E  FD       YI S  +                  
Sbjct: 139 PN-----CVFNVDDAESDWTFTPEEAFD-------YIHSRSMHG---------------- 170

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              G++ +         H    G   VEI
Sbjct: 171 ---GIADWNRFLRQAYAHTKPGGW--VEI 194


>gi|269103236|ref|ZP_06155933.1| ribosomal RNA small subunit methyltransferase C [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268163134|gb|EEZ41630.1| ribosomal RNA small subunit methyltransferase C [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 374

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 8/123 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKES 119
           + + ++  ++ F     +   +D    F L  I   +  + I+DLG G G + +   + +
Sbjct: 198 HQLTISNHANVF-----SGESLDIGGRFLLDHIPLNEKYKDIIDLGCGNGVIGIKAAQLN 252

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
           P  K + VD S  A    + NA  N  + E+      +          D+++ NPP+ + 
Sbjct: 253 PQAKVICVDESFMAGASCRENADHNLTNPEQLTVKVGNCLDDFPFDSADLVLCNPPFHQQ 312

Query: 178 VIV 180
             +
Sbjct: 313 NAI 315


>gi|256159163|ref|ZP_05456976.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M490/95/1]
 gi|265997630|ref|ZP_06110187.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M490/95/1]
 gi|262552098|gb|EEZ08088.1| cyclopropane-fatty-acyl-phospholipid synthase [Brucella ceti
           M490/95/1]
          Length = 361

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 76  PETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           P    L ++ LA       ++  ++  ++LD+G G G + L L +        GV +S +
Sbjct: 150 PPNATLAEAQLAKKRHIAAKMLVKEGDKVLDIGCGWGGMGLYLARHL-KANVTGVTLSEE 208

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              IA   A   G+++R     +D + ++   FD +VS                V  F+ 
Sbjct: 209 QHAIANQRARDEGLADRAKFELTD-YRNINDKFDRLVS----------------VGMFE- 250

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                    G+ H+      V+R +  DG+  +
Sbjct: 251 -------HVGVGHFAEYFQHVARLMKPDGVFLL 276


>gi|317159190|ref|XP_001827612.2| methyltransferase LaeA-like protein [Aspergillus oryzae RIB40]
          Length = 376

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 39/145 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   L     ++  R+LD+GTGTG   +    E P  + +G D+S             +
Sbjct: 130 ILKGELHAAPIKNPARVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPS 180

Query: 145 GV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  + RF+    +   S    FD       YI       L   +RD D           
Sbjct: 181 WIPPNLRFEVDDFEAPWSYSQPFD-------YIHGRE---LEGFIRDHD----------- 219

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI 227
                 +      +L   G    EI
Sbjct: 220 -----RLFRQALANLKPGGW--FEI 237


>gi|298372794|ref|ZP_06982784.1| SAM-dependent methyltransferase [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298275698|gb|EFI17249.1| SAM-dependent methyltransferase [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 108

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                D  R+LD+GTGTG + L + + +P      V+I  +A + A+ N   +   +   
Sbjct: 28  WCNVDDARRVLDIGTGTGLLSLMVSQRNPDVTVDAVEIDPEAADEARENVCASKFRDAIK 87

Query: 152 TLQSDW 157
                 
Sbjct: 88  VFNMSI 93


>gi|254417980|ref|ZP_05031704.1| Methyltransferase small domain family [Brevundimonas sp. BAL3]
 gi|196184157|gb|EDX79133.1| Methyltransferase small domain family [Brevundimonas sp. BAL3]
          Length = 303

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 25/144 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+  A     +       + DLG G GA+    L+ +       +D+  +A+E A+ N 
Sbjct: 150 IDAGSALLAQHMPALKGAGV-DLGCGYGALATVALRSAAVTSLRLIDLDRRAVEAARKNV 208

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
               VS  +  +++    + +G  + +VSNPP+                      DGG +
Sbjct: 209 EDPRVSIEWADVRTM---TADGELNFVVSNPPFH---------------------DGGAE 244

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                +      +  L K G+  +
Sbjct: 245 DRRLGQAFIRKAAELLKKGGVAWI 268


>gi|222055152|ref|YP_002537514.1| methyltransferase type 11 [Geobacter sp. FRC-32]
 gi|221564441|gb|ACM20413.1| Methyltransferase type 11 [Geobacter sp. FRC-32]
          Length = 275

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +SA+A +       + + ILD+ TGTG + L L +  P  +  GVD S   L  A+  A 
Sbjct: 35  ESAVAMA-ECFNAEEAIHILDVATGTGNMALTLARRMPRARITGVDFSAAMLAQAREKAQ 93

Query: 143 TNGVSERFDTLQSDW--FSSVEGLFDVIVS 170
           T   S R + L+ D       +  FD  V 
Sbjct: 94  TLQ-SNRVEFLEMDMQSLQVPDNSFDAAVC 122


>gi|323702677|ref|ZP_08114338.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323532340|gb|EGB22218.1| PUA domain containing protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 391

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 67/198 (33%), Gaps = 42/198 (21%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKR--- 96
           R L+   +        F                    +VD A      + L + E R   
Sbjct: 159 RQLEGLPL-----TTGFIGEPF--DPKVVIKENGIRFVVDLAGGQKTGYFLDQRENRLAL 211

Query: 97  ----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                  R+LD    TG   +   K     + +G+DI+  ALE+A+ NA  NG S+    
Sbjct: 212 QGLVKGCRVLDCFCHTGTFSMYAAK-FGAREVLGLDIAAPALEVARVNARLNGYSDICTF 270

Query: 153 LQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +++ F  +         FDV++ +PP                   R +++G I G   Y
Sbjct: 271 KETNSFDELRAMEKAGEKFDVVILDPPAFTKS--------------RQAVEGAIRG---Y 313

Query: 207 RTIADGVSRHLNKDGLCS 224
           + I     + L   G   
Sbjct: 314 KEINLRGMKLLPPGGFLI 331


>gi|196231143|ref|ZP_03130003.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
 gi|196224973|gb|EDY19483.1| conserved hypothetical protein [Chthoniobacter flavus Ellin428]
          Length = 161

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 31/160 (19%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL  G+GA+ +             V+   +A+   + N     ++     +  D 
Sbjct: 18  GARVLDLFAGSGALGIE-ALSRGAAAATFVESDRRAVAAIEKNLERTKLTGDVQPV--DV 74

Query: 158 FSSVE-----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           F  ++     G FD+I+++PPY +         E+   +P                    
Sbjct: 75  FRFLDRLVGAGSFDLILADPPYAKVPGERDFTPELLGSEP-------------------- 114

Query: 213 VSRHLNKDGLCSVEIGYNQK---VDVVRIFESRKLFLVNA 249
           + + L  +G+  +E     K    DV   F  ++      
Sbjct: 115 LRKALKPNGIFILEHMPGAKLPLRDVWECFRQKRYGATEV 154


>gi|254385084|ref|ZP_05000417.1| ribosomal RNA small subunit methyltransferase [Streptomyces sp.
           Mg1]
 gi|194343962|gb|EDX24928.1| ribosomal RNA small subunit methyltransferase [Streptomyces sp.
           Mg1]
          Length = 397

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 30/152 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDT 152
             D  R++DLG G G V  A+       + V  D S +A+  AK+    N     ER D 
Sbjct: 242 NTDGARVVDLGCGNGIVGTAVAVADRDAEVVFTDESYQAVASAKATFRANVTHERERADF 301

Query: 153 LQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           L  D  + ++ G  D+++ NPP+                    +L            +  
Sbjct: 302 LVGDGVAMLDPGSVDLVLCNPPFHSHQATTD----------ATAL-----------RMFA 340

Query: 212 GVSRHLNKDGLCSV----EIGYNQKVDVVRIF 239
              + L + G   V     +GY+    + R+F
Sbjct: 341 QSRKVLRQSGELWVVANRHMGYH--THLKRLF 370


>gi|171057155|ref|YP_001789504.1| cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii
           SP-6]
 gi|170774600|gb|ACB32739.1| Cyclopropane-fatty-acyl-phospholipid synthase [Leptothrix cholodnii
           SP-6]
          Length = 421

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 25/140 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  ++  +  R   R+L++G G GAV  ++ +E       GV +S + L+ A+      G
Sbjct: 193 VRRAIDEVGVRPGQRVLEIGCGWGAVAESVARER-GAHLTGVTLSTEQLDYARQRLADAG 251

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           ++ER D    D+    +  FD ++S         ++      R + P             
Sbjct: 252 LAERADLRLQDYRDIADAPFDAVIS---------IEMFEAVGRSYWPSY----------- 291

Query: 206 YRTIADGVSRHLNKDGLCSV 225
                + V R L   G   +
Sbjct: 292 ----FETVKRCLKPGGRACI 307


>gi|46580614|ref|YP_011422.1| hypothetical protein DVU2209 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602076|ref|YP_966476.1| methyltransferase small [Desulfovibrio vulgaris DP4]
 gi|46450033|gb|AAS96682.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562305|gb|ABM28049.1| methyltransferase small [Desulfovibrio vulgaris DP4]
 gi|311234348|gb|ADP87202.1| methyltransferase small [Desulfovibrio vulgaris RCH1]
          Length = 240

 Score = 59.3 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 61/172 (35%), Gaps = 32/172 (18%)

Query: 8   HSFLCRVTGLSSHQVIVDP----DSVLDDRQ----RFFLTNAIVRSLKHESIHRILGWRD 59
            S L        + V+ +P    ++ LD  Q    R  +   +      + +H +  W  
Sbjct: 9   ESLLEAA--RQRYDVVFEPLTVDETPLDVLQIRNMRQHIDALVANRSVRDPLHDLPLWAK 66

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            +     L     +  PE   L                    L++G G G   L +    
Sbjct: 67  IWPASFVLGRFLRKASPEGRTL--------------------LEVGAGCGVTGL-IASRY 105

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVS 170
            F      DI+  AL  A++N + NG+ +R    + D  S+ ++  FDVI +
Sbjct: 106 GFAHVTVSDINEDALLFARANVLKNGLEDRVSVRRVDVASTRLDEKFDVIAA 157


>gi|261819598|ref|YP_003257704.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae
           WPP163]
 gi|261603611|gb|ACX86097.1| ribosomal protein L11 methyltransferase [Pectobacterium wasabiae
           WPP163]
          Length = 295

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTIIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPADLSADVVVAN 230


>gi|239994907|ref|ZP_04715431.1| putative ribosomal RNA small subunit methyltransferase D
           [Alteromonas macleodii ATCC 27126]
          Length = 410

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 7/105 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L  +       ++DLG G G + +  L  +P  K + VD S  ALE A+ N +
Sbjct: 246 DIGARIMLEHMTVSANDVVVDLGCGNGVLGVNALSLAPDAKVIFVDESYMALESARLNVL 305

Query: 143 TNGVS--ERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIV 180
            N     ++ + + S+   ++           I+ NPP+ +   +
Sbjct: 306 NNFPDKIDQCEFVASNCLETLINRENKPAVTKILCNPPFHQQNAI 350


>gi|294784101|ref|ZP_06749402.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_27]
 gi|294488171|gb|EFG35516.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_27]
          Length = 312

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKLLGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   +   L +V    D    + R + 
Sbjct: 252 DVLVKLLDEIKYILKENSIVLFSGIIEDKLSEVISKAKEVGLEVVEVKAD---KEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|225405322|ref|ZP_03760511.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme
           DSM 15981]
 gi|225043146|gb|EEG53392.1| hypothetical protein CLOSTASPAR_04542 [Clostridium asparagiforme
           DSM 15981]
          Length = 428

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD  T TG+  L         +  GVD S  A++ A  NA  NG+S+R   L +D 
Sbjct: 251 PERVLDCFTHTGSFALNAGLAGAG-QVTGVDASQLAVDQAAENAALNGLSDRVSFLCADV 309

Query: 158 FSSVEG------LFDVIVSNPP 173
           F  +         +DV++ +PP
Sbjct: 310 FDLLPKLEKDGERYDVVILDPP 331


>gi|242021685|ref|XP_002431274.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212516531|gb|EEB18536.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 316

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 15/173 (8%)

Query: 7   SHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLT 66
           ++S L      S    I    S  ++    F   A ++    E    I   + F   ++ 
Sbjct: 74  ANSLLQHANSTSFGYFIPQESSFGNNILAVFPRMACMKLKALE--QHIQEIKTFTRPKVK 131

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGV 125
           L      P      +    L       +  +   I DLG G G++ + + L    F   V
Sbjct: 132 LEQYATMP-----HICARMLHSIQSCYDDIEGKIIADLGCGCGSLSIGSCLLNCEFC--V 184

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174
           GVD+   AL+I + N     + E  D +  D   +V    +  FD ++ NPP+
Sbjct: 185 GVDVDSDALKICQENIQEFSI-ENIDLIMCDVTKNVISLNDKKFDTVIMNPPF 236


>gi|168023836|ref|XP_001764443.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684307|gb|EDQ70710.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 308

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 42/213 (19%)

Query: 67  LSSDTFEPR-------PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + ++ F+P           + L+  +    L ++       I+DLG  +G     L +  
Sbjct: 94  VHANVFDPEASIQHLHWIMQSLLRDSYHEKLLQMLNFTPRAIVDLGCASGLSTFGLHQVF 153

Query: 120 PFFKGVGVDISCKALEIA----KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
           P    +GVD+S   + +A    K  A +         L         G +         +
Sbjct: 154 PDAHVIGVDLSPFFISVANFRVKEQAESLDQKSPVHFLHG------AGEYTG-------L 200

Query: 176 ESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQ-- 231
            S   D + + +   + PR +           + I +   R L   G    +E+      
Sbjct: 201 PSGAFDMVSMSLVCHELPRSA----------TKEILEEAHRLLRPGGALTIMEMNPYSPL 250

Query: 232 -KVDVVRIFESRKLFLVN-AFKDY--GGNDRVL 260
            +  V  +F           F DY     +R +
Sbjct: 251 VQNMVKNVFAFTAFKATEPYFDDYRTFQLERAI 283


>gi|308231588|ref|ZP_07413001.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001]
 gi|308369432|ref|ZP_07417752.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002]
 gi|308370447|ref|ZP_07421523.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003]
 gi|308371706|ref|ZP_07425893.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004]
 gi|308372931|ref|ZP_07430423.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005]
 gi|308374042|ref|ZP_07434610.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006]
 gi|308375194|ref|ZP_07443044.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007]
 gi|308376441|ref|ZP_07438834.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008]
 gi|308377459|ref|ZP_07479236.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009]
 gi|308378671|ref|ZP_07483429.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010]
 gi|308379813|ref|ZP_07487662.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011]
 gi|308395844|ref|ZP_07492167.2| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012]
 gi|308216770|gb|EFO76169.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu001]
 gi|308327629|gb|EFP16480.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu002]
 gi|308331984|gb|EFP20835.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu003]
 gi|308335771|gb|EFP24622.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu004]
 gi|308339377|gb|EFP28228.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu005]
 gi|308343253|gb|EFP32104.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu006]
 gi|308347145|gb|EFP35996.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu007]
 gi|308351083|gb|EFP39934.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu008]
 gi|308355719|gb|EFP44570.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu009]
 gi|308359674|gb|EFP48525.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu010]
 gi|308363579|gb|EFP52430.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu011]
 gi|308367215|gb|EFP56066.1| benzoquinone methyltransferase [Mycobacterium tuberculosis SUMu012]
 gi|323721034|gb|EGB30098.1| benzoquinone methyltransferase [Mycobacterium tuberculosis
           CDC1551A]
          Length = 225

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
               EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D
Sbjct: 28  WSIGEPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERGHTT--VGLD 75

Query: 129 ISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  A+E+A+  A   G++   F+   +  F+  +G FD IV      +S +   + +E 
Sbjct: 76  LSPAAVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV------DSTLFHSMPVES 129

Query: 188 RD 189
           R+
Sbjct: 130 RE 131


>gi|56963426|ref|YP_175157.1| ribosomal protein L11 methyltransferase [Bacillus clausii KSM-K16]
 gi|60390300|sp|Q5WHF9|PRMA_BACSK RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|56909669|dbj|BAD64196.1| ribosomal protein L11 methyltransferase [Bacillus clausii KSM-K16]
          Length = 315

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVD--------------SALAFSLPRIE 94
             W+ FY+        T  P  E        ++++              + L+       
Sbjct: 112 TAWKSFYHPVQVTEQVTIVPTWEEYSARPGEIVIELDPGMAFGTGTHPTTILSLQALEQA 171

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +    ++D+GTG+G + +A   +        +D+   A+  AK+N   N  S+     Q
Sbjct: 172 VKQGDAVIDVGTGSGILAIA-AWKFGAESITALDLDEVAVNSAKANVALNSASDFVHVQQ 230

Query: 155 SDWFSSV-EGLFDVIVSN 171
            +    V     DV+VSN
Sbjct: 231 GNLLDDVASESADVLVSN 248


>gi|161503956|ref|YP_001571068.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189045735|sp|A9MIM3|RUMB_SALAR RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|160865303|gb|ABX21926.1| hypothetical protein SARI_02048 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 375

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
              L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QHALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  A+ +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACARQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|307129032|ref|YP_003881048.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii
           3937]
 gi|306526561|gb|ADM96491.1| methylase for 50S ribosomal subunit protein L11 [Dickeya dadantii
           3937]
          Length = 295

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 DGKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPKDLSADVVVAN 230


>gi|149190657|ref|ZP_01868925.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1]
 gi|148835540|gb|EDL52509.1| ribosomal protein L11 methyltransferase [Vibrio shilonii AK1]
          Length = 293

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDVPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLAGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A   +    K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  
Sbjct: 169 GSGILAIA-AIKLGAAKVIGIDIDPQALTASKDNAERNGVADQLELFLPQ--NQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|295677719|ref|YP_003606243.1| ribosomal protein L11 methyltransferase [Burkholderia sp. CCGE1002]
 gi|295437562|gb|ADG16732.1| ribosomal protein L11 methyltransferase [Burkholderia sp. CCGE1002]
          Length = 300

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWIEQSIKPGQSVLDYGCGSGILAI-LAKKCGADPVIGIDIDPQAVESARHNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 ADVTYGLPDACPAGEFDVVVANILSNP 239


>gi|210621682|ref|ZP_03292758.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
 gi|210154661|gb|EEA85667.1| hypothetical protein CLOHIR_00703 [Clostridium hiranonis DSM 13275]
          Length = 183

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 33/169 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A +L ++E  +    LD+G GTG+VC+    ++P  K V V+    A+E+ ++N  
Sbjct: 16  EEVRAIALSKLEIENAKSFLDVGAGTGSVCIEAALKNPEMKVVAVERHEHAVELIEANKE 75

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             GV    + L+       +  FD +              +G   +  +           
Sbjct: 76  KFGVK-NLEILEEYAPFETDEKFDAVF-------------IGGTAKKLE----------- 110

Query: 203 LSHYRTIADGVSRHLNKDGLCS--VEIGYNQKVDVVRIFESRKLFLVNA 249
                 I D     LN+ G       I       +  +  ++    ++ 
Sbjct: 111 -----EIVDWTYEILNEGGKLCANFIIIDTFYKAL-ELLRNKGFKDIDV 153


>gi|134101248|ref|YP_001106909.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
 gi|291007762|ref|ZP_06565735.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913871|emb|CAM03984.1| SAM-dependent methyltransferase [Saccharopolyspora erythraea NRRL
           2338]
          Length = 348

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 29/173 (16%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           GW + ++  + +  D F        LV     A      +     R+ DLG G G+  + 
Sbjct: 127 GWHE-HHEDVFVGCDAFYRAGYVAELVASWIPALEGVDAKLTAGARVADLGCGLGSTSVL 185

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + +  P    VG D   +++E+A+  A   GV++R     S   S   G FD++      
Sbjct: 186 IAQAYPRTTVVGSDYHAESIELARKQAARAGVTDRVTFEVSTAQSFTGGDFDLVT----- 240

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-LCSVE 226
                +  +G      DP  +              A  V R L  DG    VE
Sbjct: 241 -MFDCLHDMG------DPLGA--------------ARQVRRALAPDGTWLLVE 272


>gi|116495070|ref|YP_806804.1| O-methyltransferase [Lactobacillus casei ATCC 334]
 gi|191638573|ref|YP_001987739.1| Predicted O-methyltransferase [Lactobacillus casei BL23]
 gi|116105220|gb|ABJ70362.1| Predicted O-methyltransferase [Lactobacillus casei ATCC 334]
 gi|190712875|emb|CAQ66881.1| Predicted O-methyltransferase [Lactobacillus casei BL23]
          Length = 244

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 23/183 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            N+++  SS  F    +  LL + A        + +   R++DL  G GAV L L +++ 
Sbjct: 15  RNIKIIQSSAVFSFSLDAVLLANFA--------QVKRHSRVVDLAAGNGAVGLFLARDT- 65

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIE 176
             +   V++  +  ++AK +   N +         D   +     +   D++  NPPY +
Sbjct: 66  DQQVTMVELQPRLADMAKRSVALNQLQ-NVTVQVGDLADATQMVAKDSVDIVTCNPPYFK 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                            ++L           T+A   +  L   G         +   + 
Sbjct: 125 VSSQSITNPN-----DHLALARHELTTDFA-TVARVSADLLKYQGKAFYVH---RPERLA 175

Query: 237 RIF 239
            + 
Sbjct: 176 ELL 178


>gi|332559147|ref|ZP_08413469.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           WS8N]
 gi|332276859|gb|EGJ22174.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           WS8N]
          Length = 333

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 50/198 (25%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++LLV++        +      R++DLG G G +  A+L+  P  +   V+    A
Sbjct: 170 PDRGSQLLVEA--------LPTDLSGRVVDLGAGWGYLARAVLERRPVKRIDLVEAEHAA 221

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A+ N       ER     +D     +    D++V NPP+  +   D           
Sbjct: 222 LDCARFNI----PDERAHFHWADATRFRLSKPADLVVCNPPFHTTREADP---------- 267

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVN 248
                    G+          +R L   G+  +     + Y++   +  +F         
Sbjct: 268 -------AIGMGF----LQAAARLLAPTGVLWLVANRHLPYDRG--LRTLFRE------- 307

Query: 249 AFKDYGGND--RVLLFCR 264
             +D GG+   R++   R
Sbjct: 308 -VEDIGGDAAFRIVRASR 324


>gi|303389578|ref|XP_003073021.1| N6 adenine specific DNA methylase [Encephalitozoon intestinalis
           ATCC 50506]
 gi|303302165|gb|ADM11661.1| N6 adenine specific DNA methylase [Encephalitozoon intestinalis
           ATCC 50506]
          Length = 167

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 72/188 (38%), Gaps = 39/188 (20%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D +EP  +T  L+D      L      ++  ILDLGT TG +   L K++     +  DI
Sbjct: 2   DWYEPGEDTYTLMDVLEEEDL------EMKVILDLGTSTGIIAEHLEKKN---TVLSSDI 52

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + KAL     N    G   R D L +      +   D++V NPPY+       +G     
Sbjct: 53  NIKAL----QN-HRGGNLVRADLLHAI----NQQHVDIVVFNPPYVLDSDDPVIG----- 98

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKL--FL 246
                   GG  G              L + G+  +  I  N+  +V+++ E +     +
Sbjct: 99  --------GGHLGREVIDRFIS-----LLEIGIVYLLVIQANKPSEVMKLLEEKGYKTKI 145

Query: 247 VNAFKDYG 254
           +   K  G
Sbjct: 146 LRVRKILG 153


>gi|299115130|emb|CBN75497.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 759

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147
            R   R    ILDL +G+G   +A             VDI+ +A+  ++ NA+ NG+   
Sbjct: 293 QRRRHRAPEEILDLCSGSGVQGIAAAVLRRGEASVTCVDINPRAVRFSRFNALLNGLDTG 352

Query: 148 ------ERFDTLQSDWFSSVEGLFDVIVS 170
                  RF  +  D + +++      VS
Sbjct: 353 GGEQEGGRFRAVVGDLYGALDSTVGDRVS 381



 Score = 40.1 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
           L+D+I++NPP++   +   L    R +D   S  GG +G      I  G    L    GL
Sbjct: 431 LYDLILANPPFVP--VPPRLASARRRYDVFAS--GGSNGEEVIEGIFRGAFDRLRPGSGL 486

Query: 223 CSV 225
            ++
Sbjct: 487 LAM 489


>gi|293394169|ref|ZP_06638469.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM
           4582]
 gi|291423147|gb|EFE96376.1| ribosomal protein L11 methyltransferase [Serratia odorifera DSM
           4582]
          Length = 293

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +          +   D
Sbjct: 168 GSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK-DQPADLQAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|296108940|ref|YP_003615889.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME]
 gi|295433754|gb|ADG12925.1| ribosomal L11 methyltransferase [Methanocaldococcus infernus ME]
          Length = 201

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 33/157 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LDLG GTG + +   K     + VG+DI  +++E+AK NA   GV    + + +D 
Sbjct: 46  GKTVLDLGCGTGRLAIG-AKLLGAKRAVGIDIDRESIEVAKENAKALGVD--VEFICNDV 102

Query: 158 FSSVEGLFD---VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    +FD   V++ NPP+                        G D     R   +   
Sbjct: 103 RNIKREMFDEEVVVIQNPPFGAQKK-------------------GSD-----RIFLEKA- 137

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             L    +      Y  K  VV+  ES    + N +K
Sbjct: 138 --LELGDVIYSIHNYPTKDFVVKFVESLGGEVTNIYK 172


>gi|331698529|ref|YP_004334768.1| methyltransferase [Pseudonocardia dioxanivorans CB1190]
 gi|326953218|gb|AEA26915.1| methyltransferase [Pseudonocardia dioxanivorans CB1190]
          Length = 187

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             RL +      P  +    V  AL  +L      D  R+LDL  G+GA+ L        
Sbjct: 11  GRRLVVPPRGTRPTSDR---VREALFSALDADPGLDGARVLDLCAGSGALGLE-ALSRGA 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPY-IESV 178
              V V+   KA  I + N    G+       T+ +    +  G FDV++++PPY +   
Sbjct: 67  AHAVFVESDKKAANILRRNVSELGLGGEVVAATVAAALAGAPRGRFDVVLADPPYAVPDT 126

Query: 179 IVDCL 183
            +   
Sbjct: 127 EIAAW 131


>gi|326437370|gb|EGD82940.1| hypothetical protein PTSG_03573 [Salpingoeca sp. ATCC 50818]
          Length = 1612

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 44/138 (31%), Gaps = 29/138 (21%)

Query: 96   RDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 +LD   G+  + L AL          GVD S KA+  A  NA   GV ++    +
Sbjct: 1398 GPGATVLDPFCGSATILLEALAASGGSITCHGVDYSPKAIRGATQNAKMEGVLDKCRFHK 1457

Query: 155  SD------WFSSVEGLFDVIVSNPPY-IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             D       F      FD I++NPP+ + S     L                      Y 
Sbjct: 1458 GDARTLTKLFEP--ASFDAIITNPPWGVRSGQSTDLVQ-------------------LYT 1496

Query: 208  TIADGVSRHLNKDGLCSV 225
                  +R +   G   V
Sbjct: 1497 IFLQDAARIIKPGGRMVV 1514


>gi|307249500|ref|ZP_07531488.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858493|gb|EFM90561.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 234

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ +        G+D++ + LE+
Sbjct: 28  PIHLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARAR--ATVTGIDMTTEPLEV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  NG+S        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|269104451|ref|ZP_06157147.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268161091|gb|EEZ39588.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 416

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++       +L++GTG G + +   +     K     IS +    A+      G
Sbjct: 185 MDRLCQQLALTPDDHLLEIGTGWGGMAIYAAQYY-GCKVTTTTISKEQYAWAQQRVDALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           ++++   L  D +  + G +D IVS         ++ +    R++            L  
Sbjct: 244 LNDQITLLLED-YRDLTGEYDKIVS---------IEMIEAVGREY------------LDM 281

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y    +     L   G  ++
Sbjct: 282 Y---IEKCQSLLKPGGRFAI 298


>gi|237752552|ref|ZP_04583032.1| SAM dependent methyltransferase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376041|gb|EEO26132.1| SAM dependent methyltransferase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 241

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 29/196 (14%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +++    D +    +T  L   A+ F            +L++G G G + +   ++ P  
Sbjct: 1   MQIYQPKDGYCYNSDTLFLHHFAMPFLKKHHA------VLEIGAGCGILGMLCARDLP-L 53

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSE--------RFDTLQSDWFSSVEGL---FDVIVSN 171
           +   ++ + K  E+   N   N +           FD L S     +E     F+ I+SN
Sbjct: 54  QLTMIEKNPKMAELCAHNLRVNQIQADLICADFLEFDFLDSKLDKKLESKMQTFNTILSN 113

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
           PP+    ++       ++ +   +       L  +  +   V+  L   G       Y+ 
Sbjct: 114 PPFYHDGVIKS-----KNSEISSARYAQN--LPFFD-LVKKVNTLLKPQGEFIF--CYD- 162

Query: 232 KVDVVRIFESRKLFLV 247
              V  +F + + F +
Sbjct: 163 AKAVFSLFSTLEHFKI 178


>gi|86358431|ref|YP_470323.1| ribosomal protein L11 methyltransferase [Rhizobium etli CFN 42]
 gi|123511392|sp|Q2K6E0|PRMA_RHIEC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|86282533|gb|ABC91596.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli CFN
           42]
          Length = 292

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 140 LEVIDRVVRSRRVRNALDLGTGSGVLAIAV-RKLKNMPVLATDIDPIATRVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N   +   ++                     
Sbjct: 199 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN--ILARPLI--------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  ++ HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 236 ------RMAPQLAAHLAPGGSVILSGILAAQRWKVIAAYSGARLRHVRTI 279


>gi|314933751|ref|ZP_07841116.1| ribosomal protein L11 methyltransferase [Staphylococcus caprae C87]
 gi|313653901|gb|EFS17658.1| ribosomal protein L11 methyltransferase [Staphylococcus caprae C87]
          Length = 312

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D+GTG+G + +A        +   +DI   A+ +AK N   N   +  + +  +    
Sbjct: 177 IIDVGTGSGILSIA-SHLVGVKRIKALDIDEMAVNVAKENFKKNRCEDAIEAVPGNLLKE 235

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
            +  ++++++N   I + I++ +  +  +
Sbjct: 236 EKEKYNIVIAN---ILAHIIEEMIEDAYN 261


>gi|229515504|ref|ZP_04404963.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TMA
           21]
 gi|229347273|gb|EEO12233.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae TMA
           21]
          Length = 428

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    A+      G
Sbjct: 200 MQRLCEQLQLKSTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALG 258

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++ +   L+ D +  + G +D +VS
Sbjct: 259 LNNQITLLKQD-YRLLSGQYDKLVS 282


>gi|153003144|ref|YP_001377469.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp.
           Fw109-5]
 gi|152026717|gb|ABS24485.1| ribosomal protein L11 methyltransferase [Anaeromyxobacter sp.
           Fw109-5]
          Length = 286

 Score = 59.3 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+GTG+G + +A  K     +    D    A+ +A+ NA  NG +     L  
Sbjct: 149 RPGASVLDVGTGSGLLAIAAAKLGAG-RVAANDNDPVAVAVARENADRNGAALE---LTG 204

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
                + G FD++V+N   I +  +  L  +V
Sbjct: 205 AAVGEIAGTFDLVVAN---ILANTLVELAPDV 233


>gi|28899657|ref|NP_799262.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|153839616|ref|ZP_01992283.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|260361497|ref|ZP_05774544.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|260878172|ref|ZP_05890527.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AN-5034]
 gi|260895468|ref|ZP_05903964.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|260903324|ref|ZP_05911719.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|38605240|sp|Q87KU2|PRMA_VIBPA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|28807909|dbj|BAC61146.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|149746855|gb|EDM57843.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|308088059|gb|EFO37754.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|308094108|gb|EFO43803.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AN-5034]
 gi|308109531|gb|EFO47071.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|308112847|gb|EFO50387.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|328472221|gb|EGF43091.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           10329]
          Length = 295

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWREVPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +               
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADKLEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R +A  +   +  +G  ++ 
Sbjct: 214 -------YLPQNQPEGLIADVVVANIL----AGP-----LRELAPIIKGLVKPNGALAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            +   Q  DV   +  
Sbjct: 258 GVLDTQAEDVASYYRD 273


>gi|319442700|ref|ZP_07991856.1| cyclopropane-fatty-acyl-phospholipid synthase [Corynebacterium
           variabile DSM 44702]
          Length = 399

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ +  +L R    +  R+L++GTG G   L+L       +   V +S +  ++A+    
Sbjct: 169 DAKVERALDRAGVGEGSRVLEIGTGWGE--LSLHAARRGAQVTSVTLSTEQADLARERIA 226

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + G+++R D    D+  +  G +D IVS
Sbjct: 227 SEGLADRVDVQLCDYREA-TGTYDAIVS 253


>gi|312886401|ref|ZP_07746010.1| methyltransferase [Mucilaginibacter paludis DSM 18603]
 gi|311301029|gb|EFQ78089.1| methyltransferase [Mucilaginibacter paludis DSM 18603]
          Length = 180

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 74/208 (35%), Gaps = 38/208 (18%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RI+G +    +RL    +   P   T  L   AL   L    + + + +LDL +GTG + 
Sbjct: 2   RIIGGK-LRGLRLNTPKNL--PVRPTTDLAKEALFNILNNQIEFEGLNVLDLFSGTGNIS 58

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
           L         + V VD S   +   K  A  + V +     ++D F  +E     +D+I 
Sbjct: 59  LEFASRGAR-QVVAVDRSVHCINYVKDTARQHKVEDIVT-YKADVFKYLEMETEQYDLIF 116

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-- 227
           ++PPY     ++ +                       + I +     L+ DGL  VE   
Sbjct: 117 ADPPY----DLNRIP-------------------EIPKIIFE--KGLLSADGLLIVEHQS 151

Query: 228 --GYNQKVDVVRIFESRKLFLVNAFKDY 253
               +Q    V           + FK+ 
Sbjct: 152 MQNLSQHPAFVEQ-RKYGHSSFSFFKNL 178


>gi|256846484|ref|ZP_05551941.1| ribosomal protein L11 methyltransferase [Fusobacterium sp.
           3_1_36A2]
 gi|256718253|gb|EEU31809.1| ribosomal protein L11 methyltransferase [Fusobacterium sp.
           3_1_36A2]
          Length = 312

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 35/182 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKFLGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N      ++ D L                   L
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN------ILADVLVKL----------------L 258

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLLF 262
              + I    S  L       +E   ++  +V+   E   L +V    D    + R + F
Sbjct: 259 DEIKYILKESSIVLFSG---IIE---DKLNEVISKAEDVGLEVVEVKTD---KEWRAVYF 309

Query: 263 CR 264
            R
Sbjct: 310 KR 311


>gi|229491934|ref|ZP_04385754.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
 gi|229321147|gb|EEN86948.1| methyltransferase domain protein [Rhodococcus erythropolis SK121]
          Length = 378

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 31/176 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +L +I    +  ++DLG G+G +  A+ ++ P    +  D S  A+  A + A  NG
Sbjct: 222 LLENLGKIAVDPLSDVIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATASANG 281

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V +R   L+ D  SS+     D+++ NPP+     V                 GG     
Sbjct: 282 VGDRVSGLRDDAVSSLPSASADLVLLNPPFHVGAAVHT---------------GGA---- 322

Query: 205 HYRTIADGVSRHLNKDGLCSVEI----GYNQ--KVDV---VRIFESRKLFLVNAFK 251
               + +   R L   G          GY +  K  V     + ++ K  ++ + K
Sbjct: 323 --LKMFEAAGRVLRPGGELWTVHNAHLGYREPLKAAVGPSEAMAKNAKFIVMKSVK 376


>gi|227824933|ref|ZP_03989765.1| SAM-dependent methyltransferase [Acidaminococcus sp. D21]
 gi|226905432|gb|EEH91350.1| SAM-dependent methyltransferase [Acidaminococcus sp. D21]
          Length = 408

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 25/135 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TGA  L             VDIS +AL+ A+ N + N + +   T +++
Sbjct: 232 KGKHVLDCFTHTGAFALN-AARGGAASVTAVDISGEALKTAQQNILRNHLVDVVTTREAN 290

Query: 157 WFSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            F  +          +D I+ +PP                   R +  G       Y+ I
Sbjct: 291 VFELLTELKAQGHAPYDFIILDPPAFTKSSSTV----------RSAFRG-------YKEI 333

Query: 210 ADGVSRHLNKDGLCS 224
                + L + G  +
Sbjct: 334 NLKAMKLLPRGGYLA 348


>gi|146342484|ref|YP_001207532.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium
           sp. ORS278]
 gi|146195290|emb|CAL79315.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium
           sp. ORS278]
          Length = 298

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L    P+       R+LDLGTGTG + +A  K +     +G DI   ++ +A+ 
Sbjct: 146 LLLDHVLKRGSPQ-------RVLDLGTGTGVLAIAAAKATRRS-VLGSDIDAPSVSVARE 197

Query: 140 NAVTNGVSERFDTLQS----DWFSSVEGLFDVIVSN 171
           NA  NG       +++        +  G FD++++N
Sbjct: 198 NARLNGAGPLVQVIRATGFAAAEFAEAGPFDLVLAN 233


>gi|118586850|ref|ZP_01544284.1| methyltransferase [Oenococcus oeni ATCC BAA-1163]
 gi|118432682|gb|EAV39414.1| methyltransferase [Oenococcus oeni ATCC BAA-1163]
          Length = 346

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D+ L  +     K   + + D G GTG + L    E+P  K   ++ + +  ++ +   
Sbjct: 48  IDAFLIANFIDKSKSQRLLLADFGAGTGIIGLLYAIENPG-KVFLIENNSQLSQLEEKTV 106

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-----DVIVSNPPYI--ESVIVDCLGLEVRDFDPRI 194
             N + +R   +  D  ++++G F     D IVSNPPY    +     L  E R      
Sbjct: 107 GLNDLKKRVTVINQDI-NNLDGTFQLNSLDAIVSNPPYFDSPNYSKKNLSKE-RSHARHE 164

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                   L+    +     + L   G         + VD + +      
Sbjct: 165 ----ENFDLAV---LVSQSKKFLKSKGKLYFIYRAERIVDFIDLLIKNGF 207


>gi|219851893|ref|YP_002466325.1| MCP methyltransferase, CheR-type [Methanosphaerula palustris E1-9c]
 gi|219546152|gb|ACL16602.1| MCP methyltransferase, CheR-type [Methanosphaerula palustris E1-9c]
          Length = 274

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 49/153 (32%), Gaps = 31/153 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSN 140
           VD      L        +R+LD+G G+G V L L K      K  G+D    +LEIA+  
Sbjct: 25  VDEMTVRLLVDAGIGPGMRVLDVGCGSGDVSLLLAKLVGKDGKITGIDRDGPSLEIARER 84

Query: 141 AVTNGVSERFDTLQSDWF--SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                +S     ++ D    S   G FD  V         ++  L   V           
Sbjct: 85  VRKLHLS-NITFIKGDICAISPGLGPFDAAV------GRRVITYLPEPV----------- 126

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYN 230
                   R IA      L   G+ +  E    
Sbjct: 127 -----DAIRKIAAA----LRPGGVVAFVEHDAT 150


>gi|220934561|ref|YP_002513460.1| Cyclopropane-fatty-acyl-phospholipid synthase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995871|gb|ACL72473.1| Cyclopropane-fatty-acyl-phospholipid synthase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 407

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 14/144 (9%)

Query: 37  FLTNAIVRSLKH-----ESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-L 86
            L + + R+ K       S H  LG  +FY + L    T SS  F  R E      +   
Sbjct: 122 RLRHLMNRNSKRGSRANISFHYDLGN-EFYKLWLDETMTYSSAVFASRDEALESAQTRKY 180

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L  ++      IL++G G G      L     ++  G+ +S + L+ A+      G+
Sbjct: 181 QRLLDSLDAEPGAHILEIGCGWGGFAE--LAARQGYRVTGLTLSREQLDFARKRMEKAGL 238

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
           SER D    D +  ++  FD +VS
Sbjct: 239 SERVDLRLQD-YRDLDEQFDHVVS 261


>gi|116670704|ref|YP_831637.1| cyclopropane-fatty-acyl-phospholipid synthase [Arthrobacter sp.
           FB24]
 gi|116610813|gb|ABK03537.1| Cyclopropane-fatty-acyl-phospholipid synthase [Arthrobacter sp.
           FB24]
          Length = 434

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 25/142 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ +     ++  +  +R+LD+G G G+  L   +       VGV +S +   +A+    
Sbjct: 193 EAKIDLVCRKLGLQPGMRVLDVGCGWGSFALHAAQRF-GVDVVGVTLSNEQAGLARKRVA 251

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+++R D    D+    +G FD I S            +   V              G
Sbjct: 252 DAGLTDRVDIRVQDYRDVDDGPFDAISS----------IGMSEHV--------------G 287

Query: 203 LSHYRTIADGVSRHLNKDGLCS 224
                     +   L   G   
Sbjct: 288 REQISRYVSQLHNLLRPGGRLL 309


>gi|317494237|ref|ZP_07952653.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316918010|gb|EFV39353.1| ribosomal protein L11 methyltransferase [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 293

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTVIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                +   DV+V+N        +  L  ++      + L G
Sbjct: 217 -DQPADLSADVVVANILAGPLRELAPLISDLPKSGGHLGLSG 257


>gi|307700827|ref|ZP_07637852.1| RNA methyltransferase, RsmD family [Mobiluncus mulieris FB024-16]
 gi|307613822|gb|EFN93066.1| RNA methyltransferase, RsmD family [Mobiluncus mulieris FB024-16]
          Length = 187

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 36/163 (22%)

Query: 73  EPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVD 128
            PR     T   V  A+   L         R+LD+  G+GA+ L AL + +     V   
Sbjct: 16  VPRSGTRPTSERVREAIFSRLDSQGVIAGARVLDIFAGSGALGLEALSRGATDAMLVDS- 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG---LFDVIVSNPPYIESVIVDCL 183
            +  A+++ ++NA      ER   + +D   F++  G    FD++  +PPY         
Sbjct: 75  -ARGAVQVLRANAAALSAGERVQVVGADAVRFAASLGANERFDLVFIDPPY--------- 124

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                      +LD G         +   V+ HL   G+  +E
Sbjct: 125 -----------ALDSG-----ILDQVLSSVATHLAPAGIIILE 151


>gi|298524048|ref|ZP_07011457.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|298493842|gb|EFI29136.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
          Length = 238

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
               EP+PE   L+          ++ +    +LD+G G  A+ LAL +       VG+D
Sbjct: 41  WSIGEPQPELAALI----------VQGKFRGDVLDVGCGEAAISLALAERGHTT--VGLD 88

Query: 129 ISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           +S  A+E+A+  A   G++   F+   +  F+  +G FD IV      +S +   + +E 
Sbjct: 89  LSPAAVELARHEAAKRGLANASFEVADASSFTGYDGRFDTIV------DSTLFHSMPVES 142

Query: 188 RD 189
           R+
Sbjct: 143 RE 144


>gi|269837716|ref|YP_003319944.1| 50S ribosomal protein L11 methyltransferase [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786979|gb|ACZ39122.1| ribosomal protein L11 methyltransferase [Sphaerobacter thermophilus
           DSM 20745]
          Length = 312

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKRDV--VRILDLGT 106
             R  +     E  PE + LV                  F L  +E+  V    +LD G 
Sbjct: 122 GRRFVIRPSWREYTPEPDDLVITLDPGMAFGTGLHPTTEFCLRWLEELPVEGKTLLDAGA 181

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GL 164
           G+G + +A            V+I   A++  + N   N V++R   +Q D    VE  G 
Sbjct: 182 GSGILSIA-AIARGAAHVDAVEIDPVAVKALRHNLDLNQVTDRVRVIQGDVVEVVEPSGG 240

Query: 165 FDVIVSN 171
           +D++++N
Sbjct: 241 YDLVLAN 247


>gi|170725256|ref|YP_001759282.1| methyltransferase small [Shewanella woodyi ATCC 51908]
 gi|262828737|sp|B1KF36|TRMN6_SHEWM RecName: Full=tRNA (adenine-N(6)-)-methyltransferase; AltName:
           Full=tRNA m6A37 methyltransferase
 gi|169810603|gb|ACA85187.1| methyltransferase small [Shewanella woodyi ATCC 51908]
          Length = 243

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 53/161 (32%), Gaps = 17/161 (10%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
                    +LD+G G+G + L +  +    +   V++   A      N + +    R +
Sbjct: 29  WAPLSKAENLLDIGAGSGLLSL-MAAQRSEAQITAVELDDTAFHACNKNFIASKWQSRLN 87

Query: 152 TLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            + +                FD I+ NPPY +              +   +     D L+
Sbjct: 88  LVYASVQEFCNQHTDGNNAQFDHIICNPPYFKGGTQSS--------NRLRAQARHTDSLT 139

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLF 245
               + + +++ L   G  S+ +        +   E  +L+
Sbjct: 140 F-HALLEVITKLLAATGTASLILPSQSMTPFIEEVEKSELW 179


>gi|154250010|ref|YP_001410835.1| hypothetical protein Fnod_1331 [Fervidobacterium nodosum Rt17-B1]
 gi|154153946|gb|ABS61178.1| conserved hypothetical protein [Fervidobacterium nodosum Rt17-B1]
          Length = 182

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 4/94 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L  SL  I + +     D+  G+G+V   +L      + V VD+S KA+   K NA  
Sbjct: 27  AILRRSLVNIVEFEGKICADVCCGSGSVGFEMLSNGAK-EVVFVDVSNKAISTVKENAKN 85

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
            G+ ++    + D   +  S   +FD+I S+PPY
Sbjct: 86  LGLDDKIKIYKEDVRRFLESYGNVFDIIYSDPPY 119


>gi|269962459|ref|ZP_06176808.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3]
 gi|269832755|gb|EEZ86865.1| ribosomal protein L11 methyltransferase [Vibrio harveyi 1DA3]
          Length = 295

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDVPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K +G+DI  +AL+ ++ NA  NGV+++ +               
Sbjct: 169 GSGILAIA-AIKLGAGKVIGIDIDPQALQASRDNAERNGVADQLEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R +A  +   +  +G  ++ 
Sbjct: 214 -------YLPQNQPEGLIADVVVANIL----AGP-----LRELAPIIKGLVKPNGDLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            +   Q  DV   +  
Sbjct: 258 GVLDTQAEDVANYYRD 273


>gi|312897474|ref|ZP_07756898.1| methyltransferase small domain protein [Megasphaera micronuciformis
           F0359]
 gi|310621535|gb|EFQ05071.1| methyltransferase small domain protein [Megasphaera micronuciformis
           F0359]
          Length = 244

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 66/194 (34%), Gaps = 30/194 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L   +D F    +T LL         P          LDLGTGT A+ L +L     
Sbjct: 18  GMKLIQRNDEFCFSLDTVLLARFGDVIKGPT---------LDLGTGTAAIPL-ILSARGA 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIES 177
            +   ++++    +IA  N V NG        + D+    E    G F V+ +NPPY E 
Sbjct: 68  TEITALELNPVMADIAARNVVLNGKESCVVVRRGDYRRIEELFPAGSFSVVYANPPYREL 127

Query: 178 VIVDCLGLE-VRD--FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                   + VR    +   +L          R +    +  L   G   +         
Sbjct: 128 FRGSSSDKDGVRKARHEETATL----------RDVLRAAAYALKFHGRFRMVH---TAQR 174

Query: 235 VVRIFESRKLFLVN 248
           +  I  + +   + 
Sbjct: 175 LAEILAAMREVAIE 188


>gi|156368878|ref|XP_001627918.1| predicted protein [Nematostella vectensis]
 gi|156214881|gb|EDO35855.1| predicted protein [Nematostella vectensis]
          Length = 378

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + ++L +  D   P    R    L ++  L  SL  +E  + V  LD+GTG   +   L 
Sbjct: 64  FGLKLDIPLDRLIPTVPLRLNYILWLED-LMKSLGEVE--EAVWGLDIGTGASCIYPLLG 120

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-------LQSDWFSSVEGLFDVIV 169
                +  +  +I   AL  A+ N   NG+  +                  V       +
Sbjct: 121 AAIDNWNFIATEIDEFALGYAQRNVAQNGMDGKIKLKLVSPDSYLKKPLKDVTQKITFCM 180

Query: 170 SNPPYIESVI 179
            NPP+     
Sbjct: 181 CNPPFFSCEE 190


>gi|110833630|ref|YP_692489.1| cyclopropane-fatty-acyl-phospholipid synthase [Alcanivorax
           borkumensis SK2]
 gi|110646741|emb|CAL16217.1| cyclopropane-fatty-acyl-phospholipid synthase [Alcanivorax
           borkumensis SK2]
          Length = 422

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 89/256 (34%), Gaps = 47/256 (18%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH----ESIHRILGWRDFYNV 63
                    + + Q +    + L       L      SL+      S H  LG  DF+++
Sbjct: 100 KVIRYFAANVDAMQALEGGFAALSKPALRMLHRYNRNSLQGSRRNISAHYDLGN-DFFSL 158

Query: 64  RLT----LSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            L      SS  F  RPE  L  + A    L     R++ +  + +L++GTG G + L  
Sbjct: 159 FLDRTMMYSSAVFS-RPEASL--EEASVHKLDLICQRLQLQPGMTVLEIGTGWGGLALHA 215

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +           IS +    A+      G+S+R   L+ D +  + G +D +VS     
Sbjct: 216 AQHY-GVTVTTTTISREQARYARDLVADAGLSDRITILEKD-YRELTGQYDRVVS----- 268

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
               V+ +     +F P     G  D           + + L  +GL  +     Q + V
Sbjct: 269 ----VEMIEAVGAEFLP-----GYFD----------VLGKRLKPEGLLLI-----QAITV 304

Query: 236 VRIFESRKLFLVNAFK 251
                   L  V+  K
Sbjct: 305 PDQRYHYALKQVDFIK 320


>gi|296160499|ref|ZP_06843315.1| ribosomal protein L11 methyltransferase [Burkholderia sp. Ch1-1]
 gi|295889248|gb|EFG69050.1| ribosomal protein L11 methyltransferase [Burkholderia sp. Ch1-1]
          Length = 300

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGADPVYGIDIDPQAVESARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +           G FD++V+N
Sbjct: 212 ---RAEVTYGLPDECPTGEFDIVVAN 234


>gi|226307758|ref|YP_002767718.1| hypothetical protein RER_42710 [Rhodococcus erythropolis PR4]
 gi|226186875|dbj|BAH34979.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 378

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 68/176 (38%), Gaps = 31/176 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +L +I    +  ++DLG G+G +  A+ ++ P    +  D S  A+  A + A  NG
Sbjct: 222 LLENLGKIAVDPLSDVIDLGCGSGILAAAIARKFPDVHVIATDQSSAAVASALATATANG 281

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           V +R   L+ D  SS+     D+++ NPP+     V                 GG     
Sbjct: 282 VGDRVSGLRDDAVSSLPSASADLVLLNPPFHVGAAVHT---------------GGA---- 322

Query: 205 HYRTIADGVSRHLNKDGLCSVEI----GYNQ--KVDV---VRIFESRKLFLVNAFK 251
               + +   R L   G          GY +  K  V     + ++ K  ++ + K
Sbjct: 323 --LKMFEAAGRVLRPGGELWTVHNAHLGYREPLKAAVGPSEAMAKNAKFIVMKSVK 376


>gi|237807573|ref|YP_002892013.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
 gi|237499834|gb|ACQ92427.1| rRNA (guanine-N(2)-)-methyltransferase [Tolumonas auensis DSM 9187]
          Length = 378

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  + ++    ++DLG G G + L  L+ +P  + + +D S  A+  ++ N  
Sbjct: 218 DIGARFLLENLPRQKRGVMVDLGCGNGVLGLMALEYNPEAELLFLDESYMAVASSQLNVE 277

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R         + ++    DVI+ NPP+ +   +                   
Sbjct: 278 QNRPQDLARCRFQVGHSLNGIDSNSIDVILCNPPFHQLQTITD----------------- 320

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +     R L + G   +
Sbjct: 321 ----DIAWQMFRDAKRCLKRGGELWI 342


>gi|118589217|ref|ZP_01546623.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614]
 gi|118437917|gb|EAV44552.1| hypothetical protein SIAM614_06728 [Stappia aggregata IAM 12614]
          Length = 218

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              +  ++      +L+LG GTG   +A  K  P  +  GVDIS   LE A+ N    G+
Sbjct: 34  DRLIRDLQPPRGGTVLELGCGTGRNLIAAAKAYPDVRFFGVDISRNMLETAQKNIDKAGL 93

Query: 147 SERFDTLQSDWFSS 160
           ++R   ++ D  + 
Sbjct: 94  TDRITLVEGDAANP 107


>gi|83950121|ref|ZP_00958854.1| ribosomal protein L11 methyltransferase, putative [Roseovarius
           nubinhibens ISM]
 gi|83838020|gb|EAP77316.1| ribosomal protein L11 methyltransferase, putative [Roseovarius
           nubinhibens ISM]
          Length = 287

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 32/154 (20%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              + D+G GT  + +A  +  P    +  DI   A+E+A++N   NG+  R + L++  
Sbjct: 149 GTSVADIGCGTAVLAMAAARIWPGV-MLASDIDAVAVEVAEANVAANGLEGRVNCLEAMG 207

Query: 158 FSS---VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           F         FD+I +N   I    +  L  E+   + R+       G +    I +   
Sbjct: 208 FDHEVLQATQFDLIFAN---ILKGPLIDLAPEMT--EQRL-----PGGYAILSGILNE-- 255

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
                           Q  +VV ++E     LV 
Sbjct: 256 ----------------QADEVVAVYEGLGNSLVQ 273


>gi|291280257|ref|YP_003497092.1| SAM-dependent methyltransferase [Deferribacter desulfuricans SSM1]
 gi|290754959|dbj|BAI81336.1| SAM-dependent methyltransferase [Deferribacter desulfuricans SSM1]
          Length = 231

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 2/103 (1%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +P+      VDS L F     + +     LD+G+G+G + + L K+        V+I   
Sbjct: 17  QPKNGFRFSVDSPLLFRFIN-KNKIFKNALDIGSGSGVLSVLLAKQFNIDCIDAVEIDKV 75

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPY 174
             E        N    +     +D F       +D+++ NPPY
Sbjct: 76  MYECLVETIKMNRYENKIYPHNNDIFRFKPDRMYDLVICNPPY 118


>gi|281420039|ref|ZP_06251038.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM
           18205]
 gi|281405839|gb|EFB36519.1| ribosomal protein L11 methyltransferase [Prevotella copri DSM
           18205]
          Length = 290

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156
             RILD GTGTG + L   K       VG DI   ++E AK NAV NGV+        S 
Sbjct: 154 TKRILDCGTGTGILALTCSKLGAK-DVVGYDIDEWSVENAKHNAVLNGVTNMEVLFGNSQ 212

Query: 157 WFSSVEGLFDVIVSN 171
             + + G+FD++++N
Sbjct: 213 VINHISGVFDLVLAN 227


>gi|199599341|ref|ZP_03212739.1| Ribosomal protein L11 methylase [Lactobacillus rhamnosus HN001]
 gi|258508567|ref|YP_003171318.1| ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus
           GG]
 gi|199589780|gb|EDY97888.1| Ribosomal protein L11 methylase [Lactobacillus rhamnosus HN001]
 gi|257148494|emb|CAR87467.1| Ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus
           GG]
 gi|259649874|dbj|BAI42036.1| ribosomal protein L11 methyltransferase [Lactobacillus rhamnosus
           GG]
          Length = 314

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 54/218 (24%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ +Y+       + +    + + P+   EL++               + L  SL     
Sbjct: 116 WKKYYHPLRVSRFLTIVPKWEHYTPQQPDELVLTLDPGMAFGTGTHPTTQLMLSLLESLV 175

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  +     + +  D+   A++ A++N   N VS       +
Sbjct: 176 RGGETMIDVGTGSGILAIA-AERLGVSQILATDVDEIAVKNAQANIALNPVSH-ITVKAN 233

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    +    D+IV+N      ++ + L                         +   V  
Sbjct: 234 DLLQGLTVSADLIVAN------ILAEVLVP-----------------------LIPQVPS 264

Query: 216 HLNKDGLCSVE-IGYNQKVDVVRIFESRKLFLVNAFKD 252
            LN  G   +  I   +   + +  +     +    +D
Sbjct: 265 RLNPHGHFLLAGIIAEKADLIRQTLQDNGFTIAQ-RRD 301


>gi|159026259|emb|CAO86408.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 219

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 28/130 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQS 155
             R+LD+GTGT  + + + +  P ++ + +D++   LEI + N ++    E+     +  
Sbjct: 42  NARVLDVGTGTARIPIMISQLRPQWQIIAIDLADSMLEIGQKNILSANCQEKIKLEKVDG 101

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    FD+++SN       ++  L                 + L   R I     R
Sbjct: 102 KNLPYQSEQFDLVISN------SLIHHL----------------ENPLPFLREI----KR 135

Query: 216 HLNKDGLCSV 225
            L  +G   +
Sbjct: 136 VLKPNGGIFL 145


>gi|154174576|ref|YP_001407723.1| ribosomal protein L11 methyltransferase [Campylobacter curvus
           525.92]
 gi|153793114|gb|EAU00995.2| ribosomal protein L11 methyltransferase [Campylobacter curvus
           525.92]
          Length = 277

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 22/126 (17%)

Query: 64  RLTLSSDTFEPRPE------TELLVDSALAFSLPRIE------------KRDVVRILDLG 105
            + L      P  E      T +++D ALAF     E             ++    LD+G
Sbjct: 92  PILLDKIYIRPSWENELKGVTNIIIDPALAFGSGHHESTGSCLLFLQKYAKNADEALDVG 151

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G+G + +AL K     +    D   +A+E +KSNA+ NGV   F  +     ++++  +
Sbjct: 152 CGSGILSIALAKLGCDVE--ACDTDEQAIESSKSNAMLNGV--NFSKIWVGSIANLDKKY 207

Query: 166 DVIVSN 171
           D++V+N
Sbjct: 208 DIVVAN 213


>gi|78065162|ref|YP_367931.1| ribosomal protein L11 methyltransferase [Burkholderia sp. 383]
 gi|123569367|sp|Q39JS9|PRMA_BURS3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|77965907|gb|ABB07287.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia sp. 383]
          Length = 300

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGANPVIGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
                D       +  +G FD++V+N
Sbjct: 212 ---HADVTYGLPDACPDGEFDIVVAN 234


>gi|170724872|ref|YP_001758898.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC
           51908]
 gi|226710114|sp|B1KQE8|PRMA_SHEWM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169810219|gb|ACA84803.1| ribosomal protein L11 methyltransferase [Shewanella woodyi ATCC
           51908]
          Length = 293

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 16/152 (10%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIE--KRDVVRILDLGT 106
           +  RL +       P PE   +++D  LAF           L  ++    D   ++D G 
Sbjct: 108 FGERLWICPSWREIPDPEAVNIILDPGLAFGTGTHPTTALCLEWLDSLNFDNKEVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K  G+DI  +A++ +K+NA  NGV ++      +         D
Sbjct: 168 GSGILAVA-ALKLGATKVTGIDIDYQAIDASKANAERNGVEDQLTLYLPE-DQPENLKAD 225

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           ++V+N        +  L  E      +++L G
Sbjct: 226 ILVANILAGPLRELAPLIAEKVKPGGQLALSG 257


>gi|162147609|ref|YP_001602070.1| methyltransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786186|emb|CAP55768.1| putative methyltransferase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 277

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           + R      ++  L  +   +  R   R+L+ G G GA  + L    P   GVG++   +
Sbjct: 47  QFRHGYRTGLEPVLMAAY--VPARPGARVLEGGCGAGAGLMCLAHRVPAISGVGLERDER 104

Query: 133 ALEIAKSNAVTNGVSERFDTLQ--------SDWFSSVEGLFDVIVSNPPYIESV 178
              +A++N   NG  +R   ++           F    G FD   +NPP+  + 
Sbjct: 105 TAALAQANFADNGF-DRLAVVRTALPDLPGPPVFPPDGGGFDHAFANPPWHHNA 157


>gi|71065302|ref|YP_264029.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter
           arcticus 273-4]
 gi|71038287|gb|AAZ18595.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter
           arcticus 273-4]
          Length = 454

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 44/241 (18%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  ++ P           LA    R++      ++++GTG
Sbjct: 180 HYDLGNAMYQCFLDDTMMYSSAVYKNPETSLAEAQQHKLALICERLQLTAEDHVIEIGTG 239

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G   +   +     +     IS    E A+      G+S++   L+ D + ++ G +D 
Sbjct: 240 WGGFAIYAAQHY-GCQITTTTISDAQYEEAQRRVELAGLSDKITLLKQD-YRTLAGQYDK 297

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDG------GIDGLSHYRTI------------ 209
           +VS              +E    +   +            GL   + I            
Sbjct: 298 LVS-----------IEMIEAVGHEYLPTFFAKCNSLLKPTGLMVLQAITFNDQNYQTYIK 346

Query: 210 -ADGVSRHLNKDGLCSV--EIGYN---QKVDVVRIFESRKLFLVNAFKDYGGNDRVLLFC 263
             D +  H+   G      E+      Q   V++             +D+    R  +  
Sbjct: 347 SVDFIQTHIFPGGCLLSNQELNTQFTEQTDMVIKQLHDYGFDYAFTLRDW---RRAFMSQ 403

Query: 264 R 264
           R
Sbjct: 404 R 404


>gi|327395340|dbj|BAK12762.1| putative ribosomal RNA small subunit methyltransferase D YgjO
           [Pantoea ananatis AJ13355]
          Length = 372

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 24/137 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
           +  + +     I+DLG G G + L  L ++P  +   +D S  A+  ++ N   N   + 
Sbjct: 218 MQHLPENIEGEIVDLGCGNGVIGLMALAQNPEAEVHFLDESYMAVASSRLNVEVNRPDDL 277

Query: 149 -RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            R     ++  S         ++ NPP+ +          V D    ++           
Sbjct: 278 SRCQFRVNNVLSGYPSDTLHAVLCNPPFHQ-------QHAVTDH---LAW---------- 317

Query: 207 RTIADGVSRHLNKDGLC 223
             +     R L   G  
Sbjct: 318 -QMFRDAKRCLQYGGEL 333


>gi|257463526|ref|ZP_05627919.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
          Length = 309

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   + +    +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 160 LCVDLMEEKIKVGETVLDVGTGSGILMI-VAEKLGARFVCGVDIDELAVEVAHENLELNA 218

Query: 146 V-SERFDTLQSDWFSSVEGL-FDVIVSN 171
           V  E+++ L  +    +E   +DV+V+N
Sbjct: 219 VPKEKYEVLHGNLIEKIEAKSYDVVVAN 246


>gi|307151575|ref|YP_003886959.1| hypothetical protein Cyan7822_1695 [Cyanothece sp. PCC 7822]
 gi|306981803|gb|ADN13684.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
          Length = 246

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 16/157 (10%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                  I++ G+G G+  +  L ++ F+    G +++  A E+A++      +  ++  
Sbjct: 41  NCTPFDSIIEFGSGDGSPVINCLTKNKFYGTIHGYELNAAACELAQNRIEQYRLKNKYII 100

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               +FS++      +++NPPY+ +   D              L GG DG +  +T+   
Sbjct: 101 HNKCFFSNISA-ASYLIANPPYLPAPDDDLYMPS---------LYGGEDGATITKTLLSL 150

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
              +     +  +   Y+  V+ V    S+   +V+ 
Sbjct: 151 GCEN-----VMLLISAYSNPVETVEYAISQGYQIVDF 182


>gi|145348280|ref|XP_001418581.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578811|gb|ABO96874.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1080

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 20/135 (14%)

Query: 85  ALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           AL   + RI+ R D  R LD+GTG+G +   L   +     V  D     + +A+ N   
Sbjct: 627 ALGRQVARIKARGDTCRALDIGTGSGILA-MLAARAGADSVVACDTHPSLVSVARRNVAA 685

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG   +   L+ D      G       + PY     V+ + L+V         D G+ G 
Sbjct: 686 NGYGSQVSVLKRDATQLERGK------HAPY---DGVNLIVLDV--------FDAGLTGD 728

Query: 204 SHYRTIADGVSRHLN 218
                + +   + L+
Sbjct: 729 DVLD-MIEAARKQLS 742


>gi|157372654|ref|YP_001480643.1| 50S ribosomal protein L11 methyltransferase [Serratia
           proteamaculans 568]
 gi|166989900|sp|A8GK75|PRMA_SERP5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157324418|gb|ABV43515.1| ribosomal protein L11 methyltransferase [Serratia proteamaculans
           568]
          Length = 293

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    I+D G 
Sbjct: 108 FGQRLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTIIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +          + L D
Sbjct: 168 GSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK-DQPADLLAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|311277940|ref|YP_003940171.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
 gi|308747135|gb|ADO46887.1| rRNA (guanine-N(2)-)-methyltransferase [Enterobacter cloacae SCF1]
          Length = 375

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 26/164 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     ++DLG G G + + LL ++P  K + +D S  A+  ++ N  
Sbjct: 212 DIGARFFMAHLPEGIEGEMVDLGCGNGVIGMQLLAQNPG-KVLFIDESYMAVASSELNVE 270

Query: 143 TNGVS--ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           TN     ER   + ++  S +E   FD ++ NPP+ +   +             I+    
Sbjct: 271 TNMPEALERSAFMVNNSLSDIEPDRFDAVLCNPPFHQQHAITD----------HIAW--- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                    + +   R L   G   + +G        ++  +  
Sbjct: 318 --------QMFNDARRSLKYGGALYI-VGNRHLDYFRKLKRAFG 352


>gi|303327054|ref|ZP_07357496.1| ribosomal protein L11 methyltransferase [Desulfovibrio sp.
           3_1_syn3]
 gi|302863042|gb|EFL85974.1| ribosomal protein L11 methyltransferase [Desulfovibrio sp.
           3_1_syn3]
          Length = 285

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 87/268 (32%), Gaps = 68/268 (25%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH---RILGWRDFY-----NVRL 65
            TG +  +V  + +  L   +      A       E++     +  WR F+       R 
Sbjct: 40  ATGETRFRVHCEQEDFLQKLRESVSRAAPETRCTLEALEVQDWLSAWRQFFTPVCCGSRF 99

Query: 66  TLSSDTFEPRPE----TELLVDS-----------------ALAFSLPRIEKRDVVRILDL 104
            +        P+    T +L++                   ++  L +         LDL
Sbjct: 100 VVLPPWLAESPDFPGRTPVLIEPKSAFGTGHHATTALCLGVVSDLLDQGRIASGQTFLDL 159

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG+G + +A  K      G+G+DI   A++ A  N   N V   FD       ++V   
Sbjct: 160 GTGSGVLGIACCKS--GLSGLGLDIDPLAVDNALENRELNQVRG-FDAALGGIEAAVGHS 216

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC- 223
           FD++++N           L   + +  P ++                  +R     G   
Sbjct: 217 FDLVLAN----------ILARPLMELAPAVA-----------------AAR--KPHGCLV 247

Query: 224 ---SVEIGYNQKVDVVRIFESRKLFLVN 248
               +EI   Q   V   ++++ L    
Sbjct: 248 LSGLLEI---QADGVEAAYKAQGLPTAR 272


>gi|238921360|ref|YP_002934875.1| ribosomal protein L11 methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|259534519|sp|C5BEW8|PRMA_EDWI9 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|238870929|gb|ACR70640.1| ribosomal protein L11 methyltransferase, putative [Edwardsiella
           ictaluri 93-146]
          Length = 293

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGHRLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGVS R +          +   D
Sbjct: 168 GSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAERNGVSGRLELYLPK-DQPADLSAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|257069467|ref|YP_003155722.1| 16S RNA G1207 methylase RsmC [Brachybacterium faecium DSM 4810]
 gi|256560285|gb|ACU86132.1| 16S RNA G1207 methylase RsmC [Brachybacterium faecium DSM 4810]
          Length = 411

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 26/153 (16%)

Query: 81  LVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           L+  AL  +L   +      V    DLG G G +   L    P    +G D    A+   
Sbjct: 248 LLLQALDRALVSGDLTADAPVTAAADLGCGNGLMTAHLAAALPEASVLGSDADADAVSST 307

Query: 138 KSNAVTNGVS-ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           ++    N +  E  +    D  S V +   D+++ NPP+ +   VD              
Sbjct: 308 RATLAANALEREEVEVSWDDALSRVADSSLDLVLLNPPFHDGTSVDA------------- 354

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                   +  + + D  +R L   G       
Sbjct: 355 --------TLVQGLLDTAARVLRPGGQLWFVHN 379


>gi|271964972|ref|YP_003339168.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum
           DSM 43021]
 gi|270508147|gb|ACZ86425.1| rRNA (guanine-N(2)-)-methyltransferase [Streptosporangium roseum
           DSM 43021]
          Length = 384

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN- 144
           L  +LPR  +R   R++DLG G G V +A    +P  + + +D S +A+  A++    N 
Sbjct: 230 LLRNLPR--RRGPERVVDLGCGNGVVGVAAALANPEAEVMFIDESYQAVASAEATFRANA 287

Query: 145 GVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           G       +  D  S V  G  D++++NPP+                             
Sbjct: 288 GAGTTARFVVGDGLSGVPAGTVDLVLNNPPFHTHQATTD--------------------- 326

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
           +    +  G    L + G   V IG       V + RIF
Sbjct: 327 ATAWRMFTGSRAALRRGGELWV-IGNRHLGYHVKLRRIF 364


>gi|218885279|ref|YP_002434600.1| methyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756233|gb|ACL07132.1| methyltransferase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 190

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 32/174 (18%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           ++    L  +      RP    + ++  +    R      +R+LDL  G+G++       
Sbjct: 7   EYGGRVLKTAEGPG-YRPAMSRVREALFSMLESRGVVWPGLRVLDLFAGSGSLAFE-ALS 64

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL----FDVIVSNPP 173
               +   V+ + KA E+ + NA T G+  ER+  +Q D    +       FDV+  +PP
Sbjct: 65  RGAAEAWFVETAPKAAELIRKNAQTLGIAQERWQVVQEDCNKLLARRSRTTFDVVFIDPP 124

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           Y    +   L   VR+                           L   G+ +VE+
Sbjct: 125 YGAGQLSPTLRNAVRN-------------------------GWLADGGIVAVEV 153


>gi|170582764|ref|XP_001896276.1| hypothetical protein [Brugia malayi]
 gi|158596561|gb|EDP34889.1| conserved hypothetical protein [Brugia malayi]
          Length = 563

 Score = 59.0 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 38/163 (23%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE--- 148
           + E  +   +LD+G   G + L++ KE      VG+DI    + +A+ N      ++   
Sbjct: 285 KKEWFEKKSVLDIGCNVGYLTLSIAKEYQPRNIVGIDIDAHLVGVARKNIRHYCDNDVPI 344

Query: 149 ----------RFDTLQSDWFSSVEGLFDVIVS---NPPYIESVIVDCLGLEVR-DFDPRI 194
                     R+  + +   +      D I     N  Y+  +  D L   V+ ++D  +
Sbjct: 345 VAGFPASFAQRYGPVSAPLTTFSTKFPDNIWFRCEN--YV--LEKDELLDAVKEEYDVIM 400

Query: 195 SL-----------DGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +L           D G       +     V RHL   GL  +E
Sbjct: 401 ALSITKWIHLNWGDAG------IKRFFKRVYRHLRPGGLFILE 437


>gi|169795493|ref|YP_001713286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter baumannii AYE]
 gi|213158568|ref|YP_002319866.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           AB0057]
 gi|215482978|ref|YP_002325183.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           AB307-0294]
 gi|239501425|ref|ZP_04660735.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           AB900]
 gi|260554554|ref|ZP_05826775.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ATCC 19606]
 gi|332855188|ref|ZP_08435739.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332866927|ref|ZP_08437268.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6013113]
 gi|332873699|ref|ZP_08441642.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6014059]
 gi|226705026|sp|B7H0I7|PRMA_ACIB3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226705027|sp|B7IC17|PRMA_ACIB5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226705029|sp|B0V7H8|PRMA_ACIBY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226705087|sp|A3M6R7|PRMA_ACIBT RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|169148420|emb|CAM86285.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter baumannii AYE]
 gi|193077749|gb|ABO12611.2| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ATCC 17978]
 gi|213057728|gb|ACJ42630.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           AB0057]
 gi|213985781|gb|ACJ56080.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           AB307-0294]
 gi|260411096|gb|EEX04393.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ATCC 19606]
 gi|322507483|gb|ADX02937.1| prmA [Acinetobacter baumannii 1656-2]
 gi|323518620|gb|ADX93001.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332727565|gb|EGJ58987.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6013150]
 gi|332734350|gb|EGJ65476.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6013113]
 gi|332738087|gb|EGJ68971.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           6014059]
          Length = 301

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE---TELLVDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   T + +D  LAF           L  + K DV
Sbjct: 100 WMDYYEPIQIGEKFWIVPEWLEP-PEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDV 158

Query: 99  VR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      +
Sbjct: 159 KDKIVIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLYVGLPE 217

Query: 157 WFSS--VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
            F         DV+V+N   I +  +  L  E   +   D   +L G
Sbjct: 218 EFDQEFKPQQADVLVAN---ILAGPLMALAPEFAKLLKSDGDFALAG 261


>gi|172059590|ref|YP_001807242.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           MC40-6]
 gi|226710056|sp|B1YSW5|PRMA_BURA4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|171992107|gb|ACB63026.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           MC40-6]
          Length = 300

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L ++      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LARKCGANPVVGIDIDPQAVESARQNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 AEVTYGLPDACPAGEFDIVVANILSNP 239


>gi|18977374|ref|NP_578731.1| hypothetical protein PF1002 [Pyrococcus furiosus DSM 3638]
 gi|18893057|gb|AAL81126.1| hypothetical protein PF1002 [Pyrococcus furiosus DSM 3638]
          Length = 365

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 24/165 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A ++  + + D   +LD   G+G + + L       + +G++   K L  A+ NA+  G
Sbjct: 206 IANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG 265

Query: 146 VSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V ++   +Q D    S      D  +SN PY   +    +                    
Sbjct: 266 VLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIP------------------ 307

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
             Y    + +++ L K G+        +K  +          +++
Sbjct: 308 DLYMKFFNELAKVLEKRGVFI----TTEKKAIEEAIAENGFEIIH 348


>gi|15889271|ref|NP_354952.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium
           tumefaciens str. C58]
 gi|15157102|gb|AAK87737.1| cyclopropane-fatty-acyl-phospholipid synthase [Agrobacterium
           tumefaciens str. C58]
          Length = 410

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 26/142 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++      +L++G G GA+ + L  +       G+ +S   L  A++ A    
Sbjct: 183 LERIAEKLQLTGNNSVLEIGCGWGALAIHLATQQ-NADVTGITLSPSQLRWAENAAEKES 241

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            + R D    D +  V+G FD IVS       V +     E   + P             
Sbjct: 242 KAGRIDLRLQD-YRDVQGQFDNIVS-------VEMFEAVGE--SYWPSY----------- 280

Query: 206 YRTIADGVSRHLNKDGLCSVEI 227
                + + R L   G   ++I
Sbjct: 281 ----FEMLKRCLKPGGRAVLQI 298


>gi|55980625|ref|YP_143922.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8]
 gi|62297879|sp|Q84BQ9|PRMA_THET8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|39654915|pdb|1UFK|A Chain A, Crystal Structure Of Tt0836
 gi|122921161|pdb|2NXE|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With S-Adenosyl-L-Methionine
 gi|122921162|pdb|2NXE|B Chain B, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With S-Adenosyl-L-Methionine
 gi|122921165|pdb|2NXJ|A Chain A, T.Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Space Group P 21 21 2
 gi|122921166|pdb|2NXJ|B Chain B, T.Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Space Group P 21 21 2
 gi|122921168|pdb|2NXN|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
           (Prma) In Complex With Ribosomal Protein L11
 gi|134104999|pdb|2NXC|A Chain A, Apo-Form Of T. Thermophilus Ribosomal Protein L11
           Methyltransferase (Prma)
 gi|188596410|pdb|3CJQ|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596412|pdb|3CJQ|D Chain D, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596414|pdb|3CJQ|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11 In Space Group
           P212121
 gi|188596416|pdb|3CJR|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Ribosomal Protein L11 (K39a) And Inhibitor
           Sinefungin.
 gi|188596437|pdb|3CJU|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Trimethylated Ribosomal Protein L11
 gi|206582140|pdb|3EGV|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Trimethylated Ribosomal Protein L11
 gi|212374912|pdb|2ZBP|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-L-Methionine
 gi|212374913|pdb|2ZBQ|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-L-Homocysteine
 gi|212374914|pdb|2ZBR|A Chain A, Crystal Structure Of Ribosomal Protein L11
           Methyltransferase From Thermus Thermophilus In Complex
           With S-Adenosyl-Ornithine
 gi|55772038|dbj|BAD70479.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB8]
          Length = 254

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 48/178 (26%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSGV--LAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A++NA  NGV  RF  L+    +++  G FD++V+N                   +   +
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN----------------LYAELHAA 199

Query: 196 LDGGIDGLSHYRTIADGVSRH---LNKDGLCSVEIGY--NQKVDVVRIFESRKLFLVN 248
           L                  R+   L   G   +  G   ++   V           + 
Sbjct: 200 L----------------APRYREALVPGGRALL-TGILKDRAPLVREAMAGAGFRPLE 240


>gi|328708016|ref|XP_003243572.1| PREDICTED: hypothetical protein LOC100573483 isoform 2
           [Acyrthosiphon pisum]
          Length = 407

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 55  LGWRDFYNVRLT-LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
             +    ++  T               +    L++ + +  K ++  +LD   G G   +
Sbjct: 207 TKYWSMRHLLFTNFDRGILLDTESFYSVCPEVLSYHIAKRCKNNI--VLDPFCGAGGNII 264

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
            L K     + +  DI    + +A+ NA   GV+ + D +  D F        DV+  +P
Sbjct: 265 QLAKTCK--RVLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDIFQIYPKLRADVVFMSP 322

Query: 173 PY-IESVIVD---CLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHL 217
           P+      +D    L     ++       GG  G     +TIA  ++ H+
Sbjct: 323 PWGGPGYSIDKSYSLTSMCDNY------FGGGFGIFDIVKTIAPNIAFHM 366


>gi|328708014|ref|XP_003243571.1| PREDICTED: hypothetical protein LOC100573483 isoform 1
           [Acyrthosiphon pisum]
          Length = 445

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 55  LGWRDFYNVRLT-LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
             +    ++  T               +    L++ + +  K ++  +LD   G G   +
Sbjct: 245 TKYWSMRHLLFTNFDRGILLDTESFYSVCPEVLSYHIAKRCKNNI--VLDPFCGAGGNII 302

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNP 172
            L K     + +  DI    + +A+ NA   GV+ + D +  D F        DV+  +P
Sbjct: 303 QLAKTCK--RVLACDIDPNKIRLARHNAEIYGVAHKIDFVVGDIFQIYPKLRADVVFMSP 360

Query: 173 PY-IESVIVD---CLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRHL 217
           P+      +D    L     ++       GG  G     +TIA  ++ H+
Sbjct: 361 PWGGPGYSIDKSYSLTSMCDNY------FGGGFGIFDIVKTIAPNIAFHM 404


>gi|239627768|ref|ZP_04670799.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517914|gb|EEQ57780.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 318

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 87/278 (31%), Gaps = 76/278 (27%)

Query: 16  GLSSHQVIVDPDSVLDD---------RQRFFLTNAIVRSLKH---ESIHRILGWRDFYNV 63
           G++     +D D+ + +          +    TN   R++     E    I  W+ ++  
Sbjct: 59  GIAKVSFYLDDDADVKEILKNVEAGLDELSLFTNLGARTITAGETEDKDWINNWKQYFK- 117

Query: 64  RLTLSSDTFEPRPET-------ELLVD--------------SALAFSLPRIEKRDVVRIL 102
             T+     +P  ET       +LLV               + L          +   +L
Sbjct: 118 PFTVDHILIKPTWETIPEEHKDKLLVQIDPGTAFGTGMHETTQLCIRQLEKRVDEDTLVL 177

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV 161
           D+GTG+G + +  LK     +  G D+   A+     N   N +S +RF  +Q +     
Sbjct: 178 DVGTGSGILGITALKLGAK-EVWGTDLDENAITAVGENLEANSISTDRFHVIQGNIIDDR 236

Query: 162 E-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                     +D++V+N                      ++             + + + 
Sbjct: 237 SVKEWAGYDRYDIVVAN---------------------ILA--------DVIILLVNEIP 267

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESR-KLFLVNA 249
            HL + G       I   +   V   F    +L LV  
Sbjct: 268 AHLKQGGYFITSGIINMKE-EAVKAAFAKCEELELVEV 304


>gi|254173067|ref|ZP_04879741.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
 gi|214033223|gb|EEB74051.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
          Length = 418

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)

Query: 85  ALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           AL   L  +E   D  R+LDL +G G   + L K    F+  G++I+  A+E+A  NA  
Sbjct: 267 ALELLLRAVENFTDGERVLDLYSGVGTFGVYLAKR--GFRVEGIEINPFAVEMANRNAKL 324

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           NGV+ +F   +++   +  G +D ++ +PP
Sbjct: 325 NGVNAQFRVGRAE--ETPIGDYDTVIVDPP 352


>gi|156102539|ref|XP_001616962.1| N6-DNA-methyltransferase [Plasmodium vivax SaI-1]
 gi|148805836|gb|EDL47235.1| Putative N6-DNA-methyltransferase, putative [Plasmodium vivax]
          Length = 223

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 19/168 (11%)

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI-LDLGTGTG-----AVCLALLKESP 120
           +  D + P  +T   ++ AL   +  I     VR+ L++GTG+G        L L K+  
Sbjct: 20  VRKDVYLPSSDTFTFLE-ALEEDVETIS--PTVRVALEMGTGSGYLILSLRELLLKKKKS 76

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESV 178
                 +DI+ KA    +     N +S   + + +D FS++     FD+++ NPPY+ + 
Sbjct: 77  LDLLYCLDINEKACNCVRKVTWDNKIS-NVEIINTDLFSNLRQCKQFDLVLFNPPYVVTE 135

Query: 179 IVDCLGLE-VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +    + V  +       GG  G          V  +++ +G+  +
Sbjct: 136 EDEMNKTDIVASY------AGGKLGREIILKFLLSVYDYVSDEGVIYL 177


>gi|157868729|ref|XP_001682917.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68126373|emb|CAJ04501.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 602

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 24/137 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           ++  L       E      +LDL +GTG + L L K     + +G+++   A+  A+ NA
Sbjct: 387 MEKMLTKVAEVAELSTGTTLLDLCSGTGTIGLTLSKHVK--RVIGIELVESAVANARRNA 444

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG++   +         VE L   ++S+ P  +   +      V   DP  +   G++
Sbjct: 445 QQNGIT-NAEFHCGR----VEHLLPSVISSLPAEDRGDI------VVILDPPRA---GVN 490

Query: 202 --------GLSHYRTIA 210
                   G+   R + 
Sbjct: 491 STVLKWIRGMETIRRVV 507


>gi|302188576|ref|ZP_07265249.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae 642]
          Length = 374

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 43/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPRNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGDR 282

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D     E    DV++ NPP+ +  +V                     G     
Sbjct: 283 DVRVQAGDGLEMHEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFVQARAALVTGGALYI 339


>gi|115695312|ref|XP_001199139.1| PREDICTED: similar to MGC80481 protein [Strongylocentrotus
            purpuratus]
 gi|115740951|ref|XP_791145.2| PREDICTED: similar to MGC80481 protein [Strongylocentrotus
            purpuratus]
          Length = 1449

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 12/180 (6%)

Query: 17   LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
            +++ +V+ +   V DD Q+        R  K+ S H I G     N         F    
Sbjct: 1206 VNAEEVVREKGEVKDDDQKSKPKAKQRRQRKYTSKHDIAGGSKHLNKYWAQRYRLFSRFD 1265

Query: 77   ETELLVDSALAFSLP-RIEKRDVVR-----ILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            E   L +       P RI +    R     I+D   G+G   +         + V VDI 
Sbjct: 1266 EGIKLDEEGWYSVTPERIAEHQAERCRCDLIVDAFCGSGGNAIQFA--FTCERVVAVDID 1323

Query: 131  CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIVSNPPYIESVIVDCLGLEVRD 189
               +E+A+ NA   GV +R + +  D+F   +    DV+  +PP+        L  EV D
Sbjct: 1324 PAKIELARHNATVYGVEDRIEFIVGDFFKVADYLKADVVFLSPPW---GGPKYLNAEVFD 1380


>gi|116052759|ref|YP_793076.1| hypothetical protein PA14_61090 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122257230|sp|Q02G60|RLMG_PSEAB RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|115587980|gb|ABJ13995.1| putative nucleotide methyltransferase [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 374

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELTLVDESYMAVQSARENWRAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|330838434|ref|YP_004413014.1| Ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
           35185]
 gi|329746198|gb|AEB99554.1| Ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
           35185]
          Length = 313

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 20/155 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  + + D+GTG+G + +   K     +   VD    A+ +A+ N   NG  +   T +S
Sbjct: 172 RPGMTVFDVGTGSGVLAIVAAKLGAK-RVEAVDFDPVAVRVARENVRQNGAEDVVRTERS 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGVS 214
           D   SV G  D+          +      + VR F + + SL  G  G      I +   
Sbjct: 231 DLLKSVAGEADL---------IIANIIADIIVRLFGEVKGSLAAG--GTMLLSGIIE--- 276

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             L       VE        V +I + +    V  
Sbjct: 277 DRLAD----VVEAAVRHGFSVAKIEQEKGWAAVIV 307


>gi|284165470|ref|YP_003403749.1| methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
 gi|284015125|gb|ADB61076.1| Methyltransferase type 11 [Haloterrigena turkmenica DSM 5511]
          Length = 266

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 5/107 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A+A  +         R+LD+G GTG   L           VG+D++   LE+A+ NA   
Sbjct: 31  AIARLVNAAGIDPGNRVLDVGCGTGNAALT--ARRSGADVVGLDLAHDMLELARENAALA 88

Query: 145 GVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           G  +    L  D       +G FDV++SN  ++ +      G E+R 
Sbjct: 89  GYDD-IGWLTGDAEALPVSDGAFDVVLSNFGHVFAPDSTAAGAELRR 134


>gi|113953886|ref|YP_731517.1| methyltransferase [Synechococcus sp. CC9311]
 gi|113881237|gb|ABI46195.1| possible methyltransferase [Synechococcus sp. CC9311]
          Length = 406

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 83  DSALAFSLPRIEKRD----VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           DS LA     +E RD     +RILD G GTG     L   +P  + + VDIS  AL++A+
Sbjct: 42  DSVLAVVRGGLESRDSNLGPIRILDAGCGTGVSTDYLCHLNPGAEILAVDISAGALDVAR 101

Query: 139 SNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVS 170
                +G +E+  +L    +S      EG FD I S
Sbjct: 102 ERLRRSGGAEQVRSLRQEQRSLLDLDDEGCFDYINS 137


>gi|115350559|ref|YP_772398.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           AMMD]
 gi|122324068|sp|Q0BIF9|PRMA_BURCM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|115280547|gb|ABI86064.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia ambifaria AMMD]
          Length = 300

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L ++      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LARKCGANPVVGIDIDPQAVESARQNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 AEVTYGLPDACPAGEFDIVVANILSNP 239


>gi|329116667|ref|ZP_08245384.1| ribosomal protein L11 methyltransferase [Streptococcus parauberis
           NCFD 2020]
 gi|326907072|gb|EGE53986.1| ribosomal protein L11 methyltransferase [Streptococcus parauberis
           NCFD 2020]
          Length = 317

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGEIVIDVGTGSGV--LSIASSLLGAKDIYAYDLDDVAVRVAQENIDLNPSTENIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D    V+   +VIV+N                      ++             + +   
Sbjct: 228 GDLLRGVDIQAEVIVAN---------------------ILA--------DILIHLTEDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E    FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-PMVKEAAEDAGFFL 291


>gi|313220821|emb|CBY31660.1| unnamed protein product [Oikopleura dioica]
          Length = 357

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 34/164 (20%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L + E    + ILD+G  +G + L + ++    K VGVDI  K +E+A+ N       E+
Sbjct: 132 LMKKEWIQGLDILDIGCNSGHLTLLIARDLKPRKIVGVDIDEKLIEMAQKNIRHYCPEEK 191

Query: 150 -----FDTLQSDWFSS-------------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
                F  L     +                     I  N  Y+ S   + L  +  ++D
Sbjct: 192 KFPASFSKLYGPLRAPYVNTGLSASRGKDFPENVHFINGN--YVFSCD-EFLERQEPEYD 248

Query: 192 PRIS--------LDGGIDGL-SHYRTIADGVSRHLNKDGLCSVE 226
             I+        L+ G +G+   +R I       L   G   +E
Sbjct: 249 TIIAFSVSKWVHLNNGDNGIKRFFRRIFRQ----LRPGGRFLLE 288


>gi|261334706|emb|CBH17700.1| proliferator-activated receptor-interacting protein (PRIP)
           interacting protein (PIMT), putative,pseudogene
           [Trypanosoma brucei gambiense DAL972]
          Length = 251

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W  F +         FE  PE       A + +      +D    LDL  G G   + L 
Sbjct: 25  WSRFDDGVWMTKKGWFEVTPEGI-----ARSSASLHDVLKDKGCCLDLFCGCGGDTVQLA 79

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF--DVIVSNPPY 174
           +     K + VDI   A+E AK NA   GVS R   L +D+ +     F  + +  +PP+
Sbjct: 80  QVFE--KVIAVDIDPDAIEAAKKNAEVYGVSTRVTFLCADYRTLKPENFSVNAVHCSPPW 137


>gi|260893457|ref|YP_003239554.1| Methyltransferase type 11 [Ammonifex degensii KC4]
 gi|260865598|gb|ACX52704.1| Methyltransferase type 11 [Ammonifex degensii KC4]
          Length = 225

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 34/152 (22%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P   L+ +         +  R   ++LD G GTG V  AL       +  G+DIS   L 
Sbjct: 18  PRGRLVWELEWRCLQKLLSLRPGEKVLDAGCGTGVVSRALAAA--GAEVTGIDISPAMLA 75

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPR 193
           +A+      G       L+ D            +S+ P+ ++     +     +F  +P 
Sbjct: 76  VARE----KGAGGNIVYLEGD------------MSSLPFPDASFDAVVCFTALEFVAEPE 119

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +L              + + R L   G   V
Sbjct: 120 RAL--------------EEMWRVLKPGGRLLV 137


>gi|226713005|sp|B6EL06|RSMC_ALISL RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
          Length = 339

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G G G +   +   +P      VDIS  A+  +      NG+        SD +S
Sbjct: 202 HVLDFGCGAGVLGSVMKTINPKIHLDMVDISAFAIASSIETLKANGLEGNVFA--SDVYS 259

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLE 186
             +  +  IVSNPP+   +       E
Sbjct: 260 DTKQNYQFIVSNPPFHAGLKTHYSSTE 286


>gi|217966763|ref|YP_002352269.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724]
 gi|217335862|gb|ACK41655.1| protein of unknown function Met10 [Dictyoglomus turgidum DSM 6724]
          Length = 395

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 26/135 (19%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +LD+   TG   L  LK     K V VD S  ALEIAK NA  NG  +R + ++ +
Sbjct: 217 DGAEVLDVFCYTGGFSLHALKYGA-SKVVAVDSSGIALEIAKENAKLNGFMDRIEFIEEN 275

Query: 157 WFSSV-----EGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTI 209
            F  +     EG  FDV++ +PP       +                   DG L  Y+ I
Sbjct: 276 AFDLLRRFHKEGRSFDVVILDPPAFAKSSKNI------------------DGALRGYKEI 317

Query: 210 ADGVSRHLNKDGLCS 224
                + +   G   
Sbjct: 318 NLRAMKIVRDGGFLI 332


>gi|209695991|ref|YP_002263921.1| ribosomal RNA small subunit methyltransferase C (16S rRNA m2G120
           methyltransferase) [Aliivibrio salmonicida LFI1238]
 gi|208009944|emb|CAQ80258.1| ribosomal RNA small subunit methyltransferase C (16S rRNA m2G120
           methyltransferase) [Aliivibrio salmonicida LFI1238]
          Length = 353

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G G G +   +   +P      VDIS  A+  +      NG+        SD +S
Sbjct: 216 HVLDFGCGAGVLGSVMKTINPKIHLDMVDISAFAIASSIETLKANGLEGNVFA--SDVYS 273

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLE 186
             +  +  IVSNPP+   +       E
Sbjct: 274 DTKQNYQFIVSNPPFHAGLKTHYSSTE 300


>gi|158289899|ref|XP_001689406.1| AGAP010425-PA [Anopheles gambiae str. PEST]
 gi|157018380|gb|EDO64279.1| AGAP010425-PA [Anopheles gambiae str. PEST]
          Length = 468

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +         K + +DI  + +E+AK NA   GV++R + +  D+   
Sbjct: 313 IIDAFCGCGGNTIQFA--FSCQKVIAIDIDPRKIEMAKHNAAVYGVADRIEFIVGDFMQL 370

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           V+    DV+  +PP+        L  EV + +  +        +   + ++  ++ +L +
Sbjct: 371 VDRLQADVVFLSPPW---GGPGYLKDEVYNLEQSLLPVPATQLMEAAQRVSKNIALYLPR 427

Query: 220 D---GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +      ++  G N  V++ + F  RKL  + A+
Sbjct: 428 NSNTQQLTMLAGPNGAVEIEQNFLDRKLIALTAY 461


>gi|291566902|dbj|BAI89174.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 442

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++ K +   ILD G G+G   LAL   +P  K VG+DIS K++E A  N +     E  
Sbjct: 52  QQVIKTEGKVILDAGCGSGYKALALALANPGAKIVGIDISEKSVE-ASRNRLKYHGIENA 110

Query: 151 DTLQSDW--FSSVEGLFDVI 168
           +          S+   FD I
Sbjct: 111 EFHAMYIEELPSLGWEFDYI 130


>gi|282883334|ref|ZP_06291928.1| methyltransferase domain superfamily [Peptoniphilus lacrimalis
           315-B]
 gi|281296838|gb|EFA89340.1| methyltransferase domain superfamily [Peptoniphilus lacrimalis
           315-B]
          Length = 229

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 19/126 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G + L ++      +   +D + ++LE+ K     N + ++   +Q D  +
Sbjct: 38  RALDLGCGNGIISLRIVDRFK--ELYAIDYNKESLELFKIALKENYLEDKIRLIQDDILN 95

Query: 160 ----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    FD I+ NPPY           + R               +  R   + VS+
Sbjct: 96  LGNYFPNNYFDQILFNPPYFNCFEPKSNMEKARHS-------------TDIRNFIEIVSK 142

Query: 216 HLNKDG 221
            L   G
Sbjct: 143 LLKARG 148


>gi|188596421|pdb|3CJT|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596423|pdb|3CJT|C Chain C, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596425|pdb|3CJT|E Chain E, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596427|pdb|3CJT|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596429|pdb|3CJT|I Chain I, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596431|pdb|3CJT|K Chain K, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596433|pdb|3CJT|M Chain M, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
 gi|188596435|pdb|3CJT|O Chain O, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
           With Dimethylated Ribosomal Protein L11
          Length = 254

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 48/178 (26%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSGV--LAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A++NA  NGV  RF  L+    +++  G FD++V+N                   +   +
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN----------------LYAELHAA 199

Query: 196 LDGGIDGLSHYRTIADGVSRH---LNKDGLCSVEIGY--NQKVDVVRIFESRKLFLVN 248
           L                  R+   L   G   +  G   ++   V           + 
Sbjct: 200 L----------------APRYREALVPGGRALL-TGILKDRAPLVREAMAGAGFRPLE 240


>gi|299140732|ref|ZP_07033870.1| ribosomal protein L11 methyltransferase [Prevotella oris C735]
 gi|298577698|gb|EFI49566.1| ribosomal protein L11 methyltransferase [Prevotella oris C735]
          Length = 287

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            +A +L  ++ +D  RILD G GTG + +   K       VG DI   ++E ++ N   N
Sbjct: 139 MIASTLLHLDLKD-KRILDCGCGTGILGIIAAKYGAKA-VVGYDIDEWSVENSQHNIAIN 196

Query: 145 GVSERFDTLQSD--WFSSVEGLFDVIVSN 171
            V E  +    D    + + G+FD++ +N
Sbjct: 197 NV-ENIEIYHGDAHVLNHISGVFDIVTAN 224


>gi|253991186|ref|YP_003042542.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782636|emb|CAQ85800.1| ribosomal protein L11 methyltransferase [Photorhabdus asymbiotica]
          Length = 296

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    I+D G 
Sbjct: 108 FGNRLWVCPSWREVPDPDAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGKTIIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF 165
           G+G + +A   +      +G+DI  +A++ ++ NA  NGV ER    L  D  + +E   
Sbjct: 168 GSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAERNGVVERLTLYLAKDQPNDLES-- 224

Query: 166 DVIVSN 171
           DV+++N
Sbjct: 225 DVVIAN 230


>gi|119473197|ref|ZP_01614894.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Alteromonadales bacterium TW-7]
 gi|119444561|gb|EAW25876.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Alteromonadales bacterium TW-7]
          Length = 293

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 61/239 (25%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHE------SIHRILGWRDFYNVRLTLSSDTF-EPR 75
           ++     +++   + +     +  + E       I         +  +L +       P 
Sbjct: 72  LLKRHDEINESLVYKIEQLEDKDWEREWMDNFHPIQ--------FGEKLWICPSWRDIPD 123

Query: 76  PE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFF 122
           P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K     
Sbjct: 124 PDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGAE- 182

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N   I +  +  
Sbjct: 183 RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN---ILAQPLRE 237

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFE 240
           L   +              GL             L   G  ++  I   Q   V  I+ 
Sbjct: 238 LHSVIL-------------GL-------------LKPGGKIAMSGILEEQAQSVADIYA 270


>gi|315127803|ref|YP_004069806.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp.
           SM9913]
 gi|315016317|gb|ADT69655.1| 50S ribosomal protein L11 methyltransferase [Pseudoalteromonas sp.
           SM9913]
          Length = 293

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 61/239 (25%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHE------SIHRILGWRDFYNVRLTLSSDTF-EPR 75
           ++     L D   + +     +  + E       I         +  +L +       P 
Sbjct: 72  LLKRHDELKDNLVYKIEQLEDKDWEREWMDNFHPIQ--------FGEKLWICPSWRDIPD 123

Query: 76  PE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFF 122
           P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K     
Sbjct: 124 PDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGAE- 182

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N   I +  +  
Sbjct: 183 RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFTADIVVAN---ILAQPLRE 237

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFE 240
           L   +              GL             L   G  ++  I   Q   V  I+ 
Sbjct: 238 LHSVIL-------------GL-------------LKPGGKIAMSGILEEQAQSVADIYA 270


>gi|308448098|ref|XP_003087615.1| hypothetical protein CRE_25038 [Caenorhabditis remanei]
 gi|308254340|gb|EFO98292.1| hypothetical protein CRE_25038 [Caenorhabditis remanei]
          Length = 349

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 32/177 (18%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             +LG R  Y+  L   SD      E E L   ALA    R + +D   IL++G G G++
Sbjct: 81  QAVLGKRLKYSASLF--SDAQTSLDEAEEL---ALAGYCERAQLKDGQHILEVGCGWGSL 135

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVS 170
            L + +  P  K   V  S       +  A     +     T   +      G FD +VS
Sbjct: 136 SLWMAEHYPNAKITVVSNSSTQRAYIQQQAKQRQFNHLTVITCDVNVLELEGGSFDRVVS 195

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                       +   VR+                Y+ + + ++  L  DGL    I
Sbjct: 196 V----------EMFEHVRN----------------YQKLFEKINTWLKPDGLLWCHI 226


>gi|256075230|ref|XP_002573923.1| n6-DNA-methyltransferase [Schistosoma mansoni]
 gi|238659114|emb|CAZ30156.1| n6-DNA-methyltransferase, putative [Schistosoma mansoni]
          Length = 211

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 27/172 (15%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE--SPFFKGVG 126
           S+ + P  ++ L +D AL      + +      L++G+G+G +   L      P F    
Sbjct: 7   SEVYPPSEDSYLFLD-ALELDSGFLSELRPTLTLEVGSGSGVISAFLCSSILKPLFHI-C 64

Query: 127 VDISCKALEIAKS--NAVTNGVSERFDTLQSDWFSSVEGLF----DVIVSNPPYIESVIV 180
            DIS  A   +    N      S  +D +     + +        D+++ NPPY+ +   
Sbjct: 65  TDISLTACHASLRVLNVNVPSTSVTYDVINCSLATPLLSRLYQSVDLVMFNPPYVPTTSD 124

Query: 181 DCLGLEVRDFDPRIS-------LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                     + + +         GG  G              L+  G   +
Sbjct: 125 ----------EHKSASSTIVASWSGGRLGREVIDPFLSQAYNLLSPHGCIYL 166


>gi|166031898|ref|ZP_02234727.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC
           27755]
 gi|166028351|gb|EDR47108.1| hypothetical protein DORFOR_01599 [Dorea formicigenerans ATCC
           27755]
          Length = 183

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++        +   +    LDL +G+G + +           V V+ + KA+
Sbjct: 22  RPTTDRIKETLFNMISAELYDSN---FLDLFSGSGGIGIE-ALSRGAANAVFVEKNPKAM 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLG 184
           +  + N  +  + +R  T+Q D F+++     E  F+ I  +PPY        L 
Sbjct: 78  KCIQENLESTKLKDRAKTMQMDVFAALSRLNGEWKFEYIFMDPPYNHEWEKQVLE 132


>gi|328880746|emb|CCA53985.1| hypothetical protein SVEN_0698 [Streptomyces venezuelae ATCC 10712]
          Length = 256

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 20/160 (12%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L +      + R+       +LD+G G G + L +L  +P  KG+G+DI+ + L   ++ 
Sbjct: 21  LSEQRATRMIERLVAGRPADVLDIGCGWGELLLRILDAAPEAKGIGLDINAEDLARGRAL 80

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A T G+++R + ++     +  G  D I+                E +  DP  +L    
Sbjct: 81  AETRGLADRVEFVEESALGTERGPVDAILC-----LGSSQALCDPE-QPHDPAAAL---- 130

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                       + R     G   +  G+ Q+        
Sbjct: 131 ----------RELRRLTRPGGRVVLGEGFWQQEPTEEELA 160


>gi|317061082|ref|ZP_07925567.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
 gi|313686758|gb|EFS23593.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D12]
          Length = 313

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   + +    +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 164 LCVDLMEEKIKVGETVLDVGTGSGILMI-VAEKLGARFVCGVDIDELAVEVAHENLELNA 222

Query: 146 V-SERFDTLQSDWFSSVEGL-FDVIVSN 171
           V  E+++ L  +    +E   +DV+V+N
Sbjct: 223 VPKEKYEVLHGNLIEKIEAKSYDVVVAN 250


>gi|260888227|ref|ZP_05899490.1| ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
           35185]
 gi|260862061|gb|EEX76561.1| ribosomal protein L11 methyltransferase [Selenomonas sputigena ATCC
           35185]
          Length = 320

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 56/155 (36%), Gaps = 20/155 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  + + D+GTG+G + +   K     +   VD    A+ +A+ N   NG  +   T +S
Sbjct: 179 RPGMTVFDVGTGSGVLAIVAAKLGAK-RVEAVDFDPVAVRVARENVRQNGAEDVVRTERS 237

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGVS 214
           D   SV G  D+          +      + VR F + + SL  G  G      I +   
Sbjct: 238 DLLKSVAGEADL---------IIANIIADIIVRLFGEVKGSLAAG--GTMLLSGIIE--- 283

Query: 215 RHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
             L       VE        V +I + +    V  
Sbjct: 284 DRLAD----VVEAAVRHGFSVAKIEQEKGWAAVIV 314


>gi|289808033|ref|ZP_06538662.1| hypothetical protein Salmonellaentericaenterica_27962 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 225

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 32/62 (51%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L+LL ++P    V VD S  A++ ++ N  
Sbjct: 149 DIGARFFMQHLPENLDGEIVDLGCGNGVIGLSLLAKNPQANVVFVDESPMAVDSSRLNVE 208

Query: 143 TN 144
           TN
Sbjct: 209 TN 210


>gi|153001576|ref|YP_001367257.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS185]
 gi|151366194|gb|ABS09194.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS185]
          Length = 418

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+   + G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVESEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISL 196
           +S++   L  D + ++ G +D +VS    IE+V  + L    +  +    P       ++
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAI 295

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                    YR   D + R++   G        V     Q   VV       L      +
Sbjct: 296 TIADQRYDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLR 355


>gi|170719525|ref|YP_001747213.1| hypothetical protein PputW619_0338 [Pseudomonas putida W619]
 gi|169757528|gb|ACA70844.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 398

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+SE+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGISEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L KDG+  
Sbjct: 322 EQAMRMLTKDGILV 335


>gi|126175251|ref|YP_001051400.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS155]
 gi|125998456|gb|ABN62531.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS155]
          Length = 418

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+   + G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVESEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISL 196
           +S++   L  D + ++ G +D +VS    IE+V  + L    +  +    P       ++
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAI 295

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                    YR   D + R++   G        V     Q   VV       L      +
Sbjct: 296 TIADQRYDSYRKSVDFIQRYIFPGGCLPSVSEMVGHIAKQTDMVVWSLNDMGLDYAKTLR 355


>gi|309776359|ref|ZP_07671346.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915878|gb|EFP61631.1| putative methyltransferase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 415

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TG+  L   +         VDIS  A+++A+ +A  N + ER     +D
Sbjct: 240 KGKHVLDCFTHTGSFALNAARGGAK-HVHAVDISQTAIDMAQEHAKRNHLEERMSFETAD 298

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  ++ L      +D+I+ +PP   +   + +   V+                 YR I 
Sbjct: 299 VFELLKELKKQPRIYDMIILDPPAF-TKSRETISHAVKG----------------YRQIN 341

Query: 211 DGVSRHLNKDGLCS 224
               + L + G  +
Sbjct: 342 TAAMKLLPRGGYLA 355


>gi|289668329|ref|ZP_06489404.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 357

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 49/165 (29%), Gaps = 27/165 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 174 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 231

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 232 VTALDLYEAEARALTLARRNLQDITHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 291

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D                         +      ++ L   G   +
Sbjct: 292 DRP--------------------DIGQRFIAVAAQALRPGGQLLL 316


>gi|134293400|ref|YP_001117136.1| methyltransferase type 11 [Burkholderia vietnamiensis G4]
 gi|134136557|gb|ABO57671.1| Methyltransferase type 11 [Burkholderia vietnamiensis G4]
          Length = 283

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +LD+G GTGAV LA+ +      +  GVDIS + +  A+  A  +GV+  F    +    
Sbjct: 53  VLDVGCGTGAVTLAIARRLAKDAQCTGVDISARMIAAARERAERDGVAAEFVHADAQTHP 112

Query: 160 SVEGLFDVIVS 170
                FD+IVS
Sbjct: 113 FARERFDLIVS 123


>gi|332994499|gb|AEF04554.1| putative ribosomal RNA small subunit methyltransferase D
           [Alteromonas sp. SN2]
          Length = 408

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 29/165 (17%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-- 147
           L  +       ++DLG G G + +  L  +   K + +D S  A+E A+ N + N     
Sbjct: 251 LEHMTVSANETVVDLGCGNGILGVNALALAGDCKVIFIDESFMAVESARLNVLENFPDKI 310

Query: 148 ERFDTLQSDWFSSVEGL-----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           ++ + + S+   S+           I+ NPP+ +   +             I+       
Sbjct: 311 DQCEFIASNCLESLLEKQQSPWVTKILCNPPFHQQNAITD----------HIAW------ 354

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
                 + +     L K G   V +G       V++        V
Sbjct: 355 -----QMFNDSKHALVKGGQLVV-VGNRHLEHHVKLKRMFGGSDV 393


>gi|332289602|ref|YP_004420454.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330432498|gb|AEC17557.1| ribosomal protein L11 methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 293

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGV +R     S   + 
Sbjct: 162 VIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAIQASRENAKRNGVEDRLQLYLS-ADTP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 NDLKADVVVAN 230


>gi|125624691|ref|YP_001033174.1| putative methyltransferase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493499|emb|CAL98477.1| putative methyltransferase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071485|gb|ADJ60885.1| putative methyltransferase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 230

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
              RIL++GT  G   L + +E P  + V +D + + +E+AK N        +    +  
Sbjct: 68  KPKRILEIGTAIGFSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQIQLKEGD 127

Query: 156 --DWFSSVEGLFDVIVS 170
             D    ++G FD++  
Sbjct: 128 AADVLQELKGPFDLVFM 144


>gi|15079428|gb|AAH11554.1| N-6 adenine-specific DNA methyltransferase 1 (putative) [Homo
           sapiens]
 gi|119630346|gb|EAX09941.1| HemK methyltransferase family member 2, isoform CRA_b [Homo
           sapiens]
          Length = 186

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 36/179 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +A       A  N V  +                                 +   V
Sbjct: 77  DINPEAAACTLETARCNKVHIQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLF 245
                  +  GG +G          V   L+  GL  +  I  N   ++++I +++ L 
Sbjct: 106 GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGLQ 164


>gi|330981861|gb|EGH79964.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 374

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +    ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPKNLGTARVADLGCGNGVLAITSALDNPQAHYTLVDESLMAVQSAAENWQATLGDR 282

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D          DV++ NPP+ +  +V                     G     
Sbjct: 283 DVRIQAGDGLEMQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQARAALVTGGALYI 339


>gi|289192387|ref|YP_003458328.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
 gi|288938837|gb|ADC69592.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
          Length = 389

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  ++LD+   TG   +         + VGVD+S KALE A+ N   N +  ++++ ++
Sbjct: 214 KEGDKVLDICCYTGGFSVHCA--IKGAEVVGVDLSKKALETAEENMKLNNIPKDKYEFIE 271

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVD 181
            + F  ++        FDV++ +PP       D
Sbjct: 272 GNAFEVMKEMIEDGEKFDVVILDPPAFTQTEED 304


>gi|261250466|ref|ZP_05943041.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP
           102891]
 gi|260939035|gb|EEX95022.1| ribosomal protein L11 methyltransferase [Vibrio orientalis CIP
           102891]
          Length = 295

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +          EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|91763133|ref|ZP_01265097.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717546|gb|EAS84197.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 396

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 26/137 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   + ++  +   ++LD+G G G++ + + K +   +  G+ +S          A    
Sbjct: 161 IQHIIKKLNIKPNQKVLDIGCGWGSLAIDIAKSN-NCEVTGITLSENQFNYCVKKAKKLN 219

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  +      D +  ++  FD IVS                V  F+          G   
Sbjct: 220 LENQVTFKLID-YRQLDEKFDRIVS----------------VGMFE--------HVGRKF 254

Query: 206 YRTIADGVSRHLNKDGL 222
           Y+     ++  LN DG+
Sbjct: 255 YKNFFKKINNLLNDDGV 271


>gi|332229367|ref|XP_003263862.1| PREDICTED: hemK methyltransferase family member 2-like isoform 2
           [Nomascus leucogenys]
          Length = 186

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 36/179 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G+G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGSGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +A       A  N V  +                                 +   V
Sbjct: 77  DINPEAAACTLETARCNKVHIQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLF 245
                  +  GG +G          V   L+  GL  +  I  N   ++++I +++ L 
Sbjct: 106 GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGLQ 164


>gi|328950316|ref|YP_004367651.1| Ribosomal protein L11 methyltransferase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450640|gb|AEB11541.1| Ribosomal protein L11 methyltransferase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 256

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 37/160 (23%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E     R+LDLGTG+G + +A        + +GVD+    +  A++NA  N    RF   
Sbjct: 117 EPIHGARVLDLGTGSGILAIAAAMR--GAEVLGVDVDASVIPQAEANARRNQAPARFKV- 173

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                 + E  +D++V+N                        L         ++T+A   
Sbjct: 174 --GSLEAAEPPYDLVVAN------------------------LYA-----ELHQTLAPRY 202

Query: 214 SRHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
           +  L   G   +  G    ++  V+R  E     L++  +
Sbjct: 203 AEILRPGGRALL-TGILAEREAGVLRAMEDAGFSLLSRRQ 241


>gi|312135034|ref|YP_004002372.1| ribosomal L11 methyltransferase [Caldicellulosiruptor owensensis
           OL]
 gi|311775085|gb|ADQ04572.1| ribosomal L11 methyltransferase [Caldicellulosiruptor owensensis
           OL]
          Length = 389

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG   +   K     K +GVDIS  A+E A  NA  NGV  + + + ++ F  
Sbjct: 218 VLDCFCHTGGFTINAAK-FGASKVIGVDISDTAIEQAVKNAKLNGVESKCEFVVANVFDY 276

Query: 161 V------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  +D+I+ + P      +  L    R                 Y+ I     
Sbjct: 277 LNELDDKKEKYDMIILDLPAFAKS-IHTLENAKRG----------------YKEINLRAM 319

Query: 215 RHLNKDGLCS 224
           + L K G+  
Sbjct: 320 KILKKGGILV 329


>gi|227878830|ref|ZP_03996737.1| O-methyltransferase [Lactobacillus crispatus JV-V01]
 gi|227861578|gb|EEJ69190.1| O-methyltransferase [Lactobacillus crispatus JV-V01]
          Length = 351

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+      F    +T  L   A          RD  ++ DL  G  A  + +      
Sbjct: 25  NLRIIQDKTAFSFSMDTLFLAYWAKDLI------RDKDKVADLCAGNCAATIYMA-YFNR 77

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    Q +  ++     +  +DV+  NPPY ++
Sbjct: 78  AHYDAIEIQNEVYSQAVRSVKLNEMENRISVFQDNVLNAGHFLRKDSYDVVTVNPPYFKA 137

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 138 PKGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMLMVH 181


>gi|221640142|ref|YP_002526404.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           KD131]
 gi|221160923|gb|ACM01903.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           KD131]
          Length = 333

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 50/198 (25%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++LLV++        +      R++DLG G G +  A+L+  P  +   V+    A
Sbjct: 170 PDRGSQLLVEA--------LPADLSGRVVDLGAGWGYLARAVLERRPVKRIDLVEAEHAA 221

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A+ N       ER     +D     +    D++V NPP+  +   D           
Sbjct: 222 LDCARLNV----PDERAHFHWADATRFRLSKPADLVVCNPPFHTTREADP---------- 267

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVN 248
                    G+          +R L   G+  +     + Y++   +  +F         
Sbjct: 268 -------AIGMGF----LQAAARLLAPTGVLWLVANRHLPYDRG--LRTLFRE------- 307

Query: 249 AFKDYGGND--RVLLFCR 264
             +D GG+   R++   R
Sbjct: 308 -VEDIGGDAAFRIVRASR 324


>gi|254516093|ref|ZP_05128153.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium NOR5-3]
 gi|219675815|gb|EED32181.1| cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium NOR5-3]
          Length = 418

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 8/129 (6%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETEL--LVDSALAFSLPRIEKRDVVRI 101
           ++ S H  LG   +R F +  +  S+  FE R  T     VD  L     +++ +    +
Sbjct: 142 RNISAHYDLGNDFFRLFLDPTMMYSAAVFERRENTLEKAAVDK-LDELCRQLDLKPDDHL 200

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           L++GTG G + +         K     IS +  + AK+     G+ +R   L  D + ++
Sbjct: 201 LEIGTGWGGMAIHAATHY-GCKVTTTTISQEQFDYAKARVSELGLEDRITLLCED-YRAL 258

Query: 162 EGLFDVIVS 170
            G +D +VS
Sbjct: 259 TGQYDKLVS 267


>gi|219666402|ref|YP_002456837.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
 gi|219536662|gb|ACL18401.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
          Length = 257

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 30/129 (23%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD+GTG G    ALL  S  +   G+D S K +E A +NA   G+   F  + S 
Sbjct: 47  PAGKVLDVGTGPGF--FALLMGSMGWDVHGIDCSEKMIETAVANAQKAGIDAEFSVMDSH 104

Query: 157 WFSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                +  FD IV  N  +I              ++P  +                   R
Sbjct: 105 SLDFPDNTFDYIVGRNVTWI-------------LYEPEKA--------------FKEWLR 137

Query: 216 HLNKDGLCS 224
            L   G   
Sbjct: 138 VLKPGGRLL 146


>gi|195486194|ref|XP_002091401.1| GE13632 [Drosophila yakuba]
 gi|194177502|gb|EDW91113.1| GE13632 [Drosophila yakuba]
          Length = 305

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 65/180 (36%), Gaps = 30/180 (16%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +++Y++ +  +  +  P    R    L ++  +            +R +D+G G+  +  
Sbjct: 66  KEYYDLDVDFAPGSLVPTLALRLNYILWLEDLMEPL-----NLQDIRGIDIGCGSSCIYS 120

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-QSD-------WFSSVEGL- 164
            L  +   +  + ++   + +E A  N   N +    +   Q D       +F   +   
Sbjct: 121 LLGAKKNGWHMLALESKLQNIEYAIENVKKNHLESLVEVYAQPDKTNIFKSYFEQDQQKL 180

Query: 165 -FDVIVSNPPYIESVIVDCLGLEVRDFD----PRISLDGGIDGL-------SHYRTIADG 212
            +   + NPP+ +S + +  G   R+ +    P  +  G  + L          + I D 
Sbjct: 181 QYQFCLCNPPFFDSNLPNPFGGNTRNPERRPAPNNARTGSQEELTCVGGEVQFVQRIIDE 240


>gi|71083831|ref|YP_266551.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062944|gb|AAZ21947.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 396

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 47/137 (34%), Gaps = 26/137 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   + ++  +   ++LD+G G G++ + + K +   +  G+ +S          A    
Sbjct: 161 IQHIIKKLNIKPNQKVLDIGCGWGSLAIDIAKSN-NCEVTGITLSENQFNYCVKKAKKLN 219

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  +      D +  ++  FD IVS                V  F+          G   
Sbjct: 220 LENQVTFKLID-YRQIDEKFDRIVS----------------VGMFE--------HVGRKF 254

Query: 206 YRTIADGVSRHLNKDGL 222
           Y+     +   L  DG+
Sbjct: 255 YKNFFKKIDNLLKDDGV 271


>gi|66810371|ref|XP_638909.1| cyclopropane fatty acid synthase [Dictyostelium discoideum AX4]
 gi|60467516|gb|EAL65538.1| cyclopropane fatty acid synthase [Dictyostelium discoideum AX4]
          Length = 430

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 63/167 (37%), Gaps = 27/167 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +  ++ S   F  R +       + +   + +   +    +L++G G GA+ +    +
Sbjct: 163 FLDKTMSYSCAYFNHREQDLEEAQYNKIRKLIDQANLKKDHHLLEIGCGWGALAIE-AVK 221

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               +  G+ +S + L+  +      G+ +R D    D + +V G FD I+S        
Sbjct: 222 RTGCRVTGISLSQEQLKYGRERVKEEGLEDRIDLQYID-YRNVVGQFDSIIS-------- 272

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              C  LE   ++              Y+T    V R L  +G+  +
Sbjct: 273 ---CEMLEAVGYEN-------------YKTYFQSVERLLKPNGVLVL 303


>gi|325856899|ref|ZP_08172397.1| ribosomal protein L11 methyltransferase [Prevotella denticola CRIS
           18C-A]
 gi|325483272|gb|EGC86249.1| ribosomal protein L11 methyltransferase [Prevotella denticola CRIS
           18C-A]
          Length = 288

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R LD G GTG + + +       + V  DI   ++  A  NA  NGV    D L+ D
Sbjct: 151 KGKRTLDCGCGTGILSI-VAARCGAREAVCYDIDEWSVRNAHHNAELNGVE--IDVLEGD 207

Query: 157 --WFSSVEGLFDVIVSN 171
               S V G+FDVI++N
Sbjct: 208 KSVLSHVNGVFDVIMAN 224


>gi|239993031|ref|ZP_04713555.1| ribosomal RNA small subunit methyltransferase C [Alteromonas
           macleodii ATCC 27126]
          Length = 360

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 32/173 (18%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            + G       ++      F  +      +D+     L ++       ILD   G G + 
Sbjct: 185 HVEGTAW----QVASMPGVFSYKE-----LDAGTELLLEKLSTSLSGEILDFACGAGVIA 235

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
             ++ + P  K    D+S  A+  +      NG+S       +D           IV+NP
Sbjct: 236 SYIMLKYPHLKLHLTDVSALAVYCSALTLADNGLSA--TLYAADGLHGFTQKVQHIVTNP 293

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P+   +  D                      +  +         L++ G   +
Sbjct: 294 PFHTGIKTD---------------------YTITKRFISDAKASLSRGGTMQM 325


>gi|221202424|ref|ZP_03575456.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD2M]
 gi|221208116|ref|ZP_03581121.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD2]
 gi|221172019|gb|EEE04461.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD2]
 gi|221177701|gb|EEE10116.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD2M]
          Length = 300

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGANPVVGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +   G FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPAGEFDIVVAN 234


>gi|209542241|ref|YP_002274470.1| putative methyltransferase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529918|gb|ACI49855.1| putative methyltransferase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 272

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           + R      ++  L  +   +  R   R+L+ G G GA  + L    P   GVG++   +
Sbjct: 42  QFRHGYRTGLEPVLMAAY--VPARPGARVLEGGCGAGAGLMCLAHRVPAISGVGLERDER 99

Query: 133 ALEIAKSNAVTNGVSERFDTLQ--------SDWFSSVEGLFDVIVSNPPYIESV 178
              +A++N   NG  +R   ++           F    G FD   +NPP+  + 
Sbjct: 100 TAALAQANFADNGF-DRLAVVRTALPDLPGPPVFPPDGGGFDHAFANPPWHHNA 152


>gi|123442936|ref|YP_001006911.1| cobalt-precorrin-6Y C(15)-methyltransferase [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122089897|emb|CAL12754.1| precorrin-8W decarboxylase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 189

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++    +L R+       ++D+G GTG+V L      P  +   ++ +  ALE+   N  
Sbjct: 17  EAVRVLALERLSLSGAAHLIDVGAGTGSVALEAALRFPDLRVTAIERNPVALELINENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G   + D +       +    D I                             GG  G
Sbjct: 77  RLGCR-KVDIIAGVAPLPLSDKADAI---------------------------FIGGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D     LN  G   +
Sbjct: 109 --HLTDLIDWSLMMLNPGGRLVL 129


>gi|58197434|dbj|BAD88649.1| hypothetical protein [Streptococcus suis]
          Length = 275

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +        
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDEVAVRVAQENIDLNANTSNIHVAAG 228

Query: 156 DWFSSVEGLFDVIVSN 171
           D    ++   +VIV+N
Sbjct: 229 DLLRGIDIKAEVIVAN 244


>gi|320103500|ref|YP_004179091.1| type 11 methyltransferase [Isosphaera pallida ATCC 43644]
 gi|319750782|gb|ADV62542.1| Methyltransferase type 11 [Isosphaera pallida ATCC 43644]
          Length = 476

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+   TG   LA   +    +  GVD+  KA+ +A+ NA  N    R   +QSD F  
Sbjct: 293 VLDVCCYTGGFALAAKLQGGAAEVQGVDLDEKAIALARENAHLN--QVRVSFVQSDAFGY 350

Query: 161 VEG------LFDVIVSNPP 173
           +         F VIV +PP
Sbjct: 351 LRQMAVNQRRFGVIVLDPP 369


>gi|145297996|ref|YP_001140837.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|166223393|sp|A4SJL7|PRMA_AERS4 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|142850768|gb|ABO89089.1| ribosomal protein L11 methyltransferase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 292

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 106 FGERLWICPSWRDVPNPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLAGKTVVDFGC 165

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFSSVEGLF 165
           G+G + +A   +    + +G+DI  +A++ +  NA  NGV+ + +  L +D    VE   
Sbjct: 166 GSGILGIA-ALKLGAARVIGIDIDPQAIQASHDNAERNGVAGQIELYLPADQPQDVEA-- 222

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 223 DVVVAN 228


>gi|89095133|ref|ZP_01168059.1| probable ribosomal RNA small subunit methyltransferase
           [Oceanospirillum sp. MED92]
 gi|89080628|gb|EAR59874.1| probable ribosomal RNA small subunit methyltransferase
           [Oceanospirillum sp. MED92]
          Length = 346

 Score = 59.0 bits (142), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 35/178 (19%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELL----VDSALAFSLPRIEK------RDVVRILDLGTG 107
           +D+  +R+T++ + F+   +  +     VD   AF +  +++            LDLG G
Sbjct: 157 KDYPTLRVTVADEQFDYYSKPGVFGWDKVDKGSAFLIEHLDQFLMTLPEPPKNALDLGCG 216

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + L + +          D +  A+   + N     ++ +   + +     +   FD+
Sbjct: 217 YGYLSLNISQL--DIPVTASDNNAAAILACQRNFDRYPINGKV--IPASCAEGISEKFDL 272

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           I+ NPP+     VD                                   LN+ G+   
Sbjct: 273 IICNPPFHAGFSVDG---------------------DLTDRFLKATHDRLNERGVACF 309


>gi|312137498|ref|YP_004004835.1| precorrin-6y c5,15-methyltransferase (decarboxylating), cbit
           subunit [Methanothermus fervidus DSM 2088]
 gi|311225217|gb|ADP78073.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Methanothermus fervidus DSM 2088]
          Length = 187

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 43/174 (24%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +      L +   +    ++++G GTGA+ + L K++   +   +D + KA+ + + N  
Sbjct: 19  EEIRCLVLCKARIKKNDYVVEVGCGTGAITIELAKKAG--RIDAIDKNIKAINLTRKNLK 76

Query: 143 TNGVSERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             G+ +R + +  +    ++ L  FDV++                            GG 
Sbjct: 77  KQGLLDRVNIIHGEATEVLKNLKNFDVMI---------------------------VGGS 109

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
            G    + I +  S+ L ++G   +            I    K+  V+  ++ G
Sbjct: 110 GG--KLQEILNIGSKKLTENGRIVI----------TAILLETKVEAVHTLQNLG 151


>gi|271499905|ref|YP_003332930.1| type 11 methyltransferase [Dickeya dadantii Ech586]
 gi|270343460|gb|ACZ76225.1| Methyltransferase type 11 [Dickeya dadantii Ech586]
          Length = 265

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L    K+ V+ ILD+GTG G   + L           VD++   L  A++NA   GV  
Sbjct: 54  ILRHAPKKAVLNILDVGTGPGFFAVTLAMAGHN--VTAVDVTPAMLAQARNNAAHYGVDI 111

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           R            +  FD++V+
Sbjct: 112 RLVATDVHTLPFPDNHFDLLVT 133


>gi|225389731|ref|ZP_03759455.1| hypothetical protein CLOSTASPAR_03479 [Clostridium asparagiforme
           DSM 15981]
 gi|225044224|gb|EEG54470.1| hypothetical protein CLOSTASPAR_03479 [Clostridium asparagiforme
           DSM 15981]
          Length = 246

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 41/184 (22%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++      +L++G G+GA+ +      P  K  G+D    A+      
Sbjct: 62  IMEQVHRVVLSHLDYDGQGSLLEVGCGSGALSIRAALTWPESKVTGMD-YWGAVYNYSKA 120

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           + + NA + GV+ R      D       +  FD ++SN  Y+   ++             
Sbjct: 121 LCEKNAASEGVASRCVFRHGDANHLDFPDESFDAVISN--YVYHNVM------------- 165

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-------VRIFESRKLFL 246
                G D       +     R L K G+ ++    + K  +        +         
Sbjct: 166 -----GAD----MHKLLLESLRVLKKGGVFAL--NDDMKPKLYGDMDVFAQKLREMGYQD 214

Query: 247 VNAF 250
           V   
Sbjct: 215 VRLI 218


>gi|222635010|gb|EEE65142.1| hypothetical protein OsJ_20224 [Oryza sativa Japonica Group]
          Length = 772

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVT 143
            L  +    +      + D G G G   L++       +  VG+DI  ++LE+A+ NA  
Sbjct: 36  MLYTAENSFDDITGKVVADFGCGCG--TLSVASSLLDAEHVVGIDIDPQSLELAQENAAD 93

Query: 144 NGVSERFDTLQSDWFS-SVEGLF-DVIVSNPPYIESVIVDCLG 184
             +    D +Q D  + ++ GL  D +V NPP+  S     + 
Sbjct: 94  LELD--IDLIQCDIKNLNLRGLLVDTVVMNPPFGTSRKGADME 134


>gi|161525950|ref|YP_001580962.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           ATCC 17616]
 gi|189349331|ref|YP_001944959.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           ATCC 17616]
 gi|221213232|ref|ZP_03586207.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD1]
 gi|226710059|sp|A9AI41|PRMA_BURM1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|160343379|gb|ABX16465.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           ATCC 17616]
 gi|189333353|dbj|BAG42423.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           ATCC 17616]
 gi|221166684|gb|EED99155.1| ribosomal protein L11 methyltransferase [Burkholderia multivorans
           CGD1]
          Length = 300

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGANPVVGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +   G FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPAGEFDIVVAN 234


>gi|308807909|ref|XP_003081265.1| Fmu (ISS) [Ostreococcus tauri]
 gi|116059727|emb|CAL55434.1| Fmu (ISS) [Ostreococcus tauri]
          Length = 276

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 16/159 (10%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
               FE + E   L+ +AL       E +   R+LD   G G   LA+  E  F +    
Sbjct: 61  REGWFEVQDEGSQLIVAAL-------EAKAGERVLDACAGNGGKTLAIAAEMKFGEVCVF 113

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLE 186
           DI  + L   ++NA   G  +   T+Q      +    FD ++ + P      +      
Sbjct: 114 DIDRRRLAHLEANAERAGSRDMVTTVQGTSLQDLAPQSFDAVLVDAPCSSVGALRRTPSL 173

Query: 187 VRDFDPRISLDGGIDGLSHYRT-IADGVSRHLNKDGLCS 224
               D         + L+  +  I    +  +   G   
Sbjct: 174 RHMHD-------DPNELAKIQLGILREAAALVKPGGRLV 205


>gi|326773646|ref|ZP_08232929.1| RNA methyltransferase, RsmD family [Actinomyces viscosus C505]
 gi|326636876|gb|EGE37779.1| RNA methyltransferase, RsmD family [Actinomyces viscosus C505]
          Length = 204

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 9/139 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +      P  E    V  AL   L      D  R+LDL  G+GA+ L        
Sbjct: 29  GRRIEVPRSGTRPTSER---VREALFARLDHYRVLDGARVLDLCAGSGALGLE-AASRGA 84

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVEG-LFDVIVSNPPY--IE 176
            +   VD S  A +  + N    G+S         + + +   G   D+++ +PPY   E
Sbjct: 85  CEVTLVDSSRGASQTCRRNIRALGLSGVSAVTAKAAAFLAGPAGAPADLVLIDPPYELSE 144

Query: 177 SVIVDCLGLEVRDFDPRIS 195
             +   L   VR  DP ++
Sbjct: 145 EELTAILTALVRSEDPWLA 163


>gi|323497938|ref|ZP_08102947.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
 gi|323316983|gb|EGA69985.1| ribosomal RNA small subunit methyltransferase C [Vibrio sinaloensis
           DSM 21326]
          Length = 376

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 71/201 (35%), Gaps = 38/201 (18%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALL 116
            DF+   L    + +     +   +D    F L  + K     +++DLG G G + + L 
Sbjct: 198 HDFW---LNNLPNVY-----SGESLDLGARFMLEHLPKDLGDKKVIDLGCGNGVLSVKLG 249

Query: 117 KESPFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPY 174
           + +P  +   VD S  ++E A  N     G +  F  + ++          D++V NPP+
Sbjct: 250 QLNPNIQLTCVDESFMSIESASKNLTEALGNNREFRCVANNCLDGFSAAQADLVVCNPPF 309

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE----IGYN 230
            +   +             I+             +       LN  G   V     +GY+
Sbjct: 310 HQQQAITD----------HIAW-----------QMFCDAKHVLNNGGQLLVIGNRHLGYD 348

Query: 231 QKVDVVRIFESRKLFLVNAFK 251
               + R+F    +  V A K
Sbjct: 349 --GKLTRLFGKTNVKTVAANK 367


>gi|302407075|ref|XP_003001373.1| DUF890 domain-containing protein [Verticillium albo-atrum VaMs.102]
 gi|261359880|gb|EEY22308.1| DUF890 domain-containing protein [Verticillium albo-atrum VaMs.102]
          Length = 336

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 8/146 (5%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           Y +++ L  D      P     +L    L       E+   +  LD+GTG   +   L  
Sbjct: 99  YGLKIELPDDRLCPPVPVRHNYILWLKELIDGSSYAERGRKMTGLDIGTGASCIYPLLAC 158

Query: 118 ESPFFKGVGV-DISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGLFDVIVSNP 172
           +   +  +   ++  K+L  AK N   N V  R   +          +     D  ++NP
Sbjct: 159 QQRNWSFIATGNVDPKSLSFAKKNVELNHVQNRIQIISRQSSDPLIPAHPAAIDFTMTNP 218

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDG 198
           P+ ES        + +   P  +  G
Sbjct: 219 PFYESDADLLASAKQKSRPPLSACTG 244


>gi|253686645|ref|YP_003015835.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|259534546|sp|C6DIJ9|PRMA_PECCP RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|251753223|gb|ACT11299.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 295

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTIIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPADLSADVVVAN 230


>gi|237746941|ref|ZP_04577421.1| ribosomal protein L11 methyltransferase [Oxalobacter formigenes
           HOxBLS]
 gi|229378292|gb|EEO28383.1| ribosomal protein L11 methyltransferase [Oxalobacter formigenes
           HOxBLS]
          Length = 312

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 89  SLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            L  +EK  +  + ILD G G+G + +A  K+       GVDI  +++  ++ NA  N  
Sbjct: 165 CLEWLEKNVKKDLSILDYGCGSGILSIA-AKKLGAKTVTGVDIDPQSVATSRENAARNHC 223

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSN 171
                  +    S     +D++V+N
Sbjct: 224 QMSCYLPEEFSTSEQSIRYDIVVAN 248


>gi|187736308|ref|YP_001878420.1| SAM-dependent methyltransferase [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426360|gb|ACD05639.1| putative SAM-dependent methyltransferase [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 394

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 66/216 (30%), Gaps = 36/216 (16%)

Query: 17  LSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRP 76
           LS   +IV  DS +   +    +  + R  + E      G   F  + L     T     
Sbjct: 142 LSPRGIIVRNDSPMLAAEGISPSVRVARGQQPEPFAARSGSVQFM-IDLQTGQKTGLYLD 200

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +        L             R+LD     G   LA        +   VD+S  A++ 
Sbjct: 201 Q--------LDNYAAVARFARGRRVLDCFCNQGGFALACALAGA-SEVTAVDVSQDAMDA 251

Query: 137 AKSNAVTNGVSER------FDTLQSD---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
              NA  NGVS +      FD L+ +        E  +D+I+ +PP              
Sbjct: 252 VARNARLNGVSVQCVTDNAFDFLKKEAALVRDGGEHKWDLIILDPPSFTRNKKSV----- 306

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                        D +  Y+ I     + L   G+ 
Sbjct: 307 ------------HDAMRGYKEIHLRAMKLLAPGGIL 330


>gi|29467707|dbj|BAC67244.1| ribosomal protein L11 methyltransferase [Thermus thermophilus]
          Length = 254

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 20/137 (14%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSGV--LAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A++NA  NGV  RF  L+    +++  G FD++V+N   + + +   L    R+     +
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN---LYAELHAALAPRYRE-----A 207

Query: 196 LDGGIDGLSHYRTIADG 212
           L  G  G +    I   
Sbjct: 208 LVPG--GRALLTGILKD 222


>gi|170699982|ref|ZP_02891009.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           IOP40-10]
 gi|170135130|gb|EDT03431.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           IOP40-10]
          Length = 300

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L ++      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLERSVKPGQSVLDYGCGSGILAI-LARKCGANPVVGIDIDPQAVESARQNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 AEVTYGLPDACPAGEFDIVVANILSNP 239


>gi|149640047|ref|XP_001513281.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 481

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 14  VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTF- 72
           V GLSS        +    RQ  +      + L  E    IL   +   +   +S + F 
Sbjct: 250 VCGLSSLYFQESTMTRCSHRQSPY------QLLSGEP--YIL--EELSGLTFRISPEAFF 299

Query: 73  -EPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVGVDIS 130
               P  ELL       +  R+   +   +L D+  GTGA+ L+L       + +GV++ 
Sbjct: 300 QINTPGAELL-----YQTEGRLSGLNPATVLLDICCGTGAIGLSLAPRV--SRVLGVELI 352

Query: 131 CKALEIAKSNAVTNGVSER-------FDTLQSDWFSSVEGLFDVIVSNP 172
            +A+E A+  A  NG+S            +     S +EG   V V NP
Sbjct: 353 EQAVEDARWTAAFNGISNCEFHAGPAEKIVPQLLVSQMEGRSLVAVVNP 401


>gi|126725536|ref|ZP_01741378.1| ribosomal protein L11 methyltransferase, putative [Rhodobacterales
           bacterium HTCC2150]
 gi|126704740|gb|EBA03831.1| ribosomal protein L11 methyltransferase, putative [Rhodobacterales
           bacterium HTCC2150]
          Length = 289

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 20/118 (16%)

Query: 73  EPRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    E      + D+G GT  + +A  K
Sbjct: 109 VPDDRIALLIEAAMAFGTGHHGTTLGCLRAVDRLMDEGFVGQSVADIGAGTAVLAMAAAK 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSN 171
             P  K +  DI   A+E+A++NA  N V+++   +++  F       +  FD++ +N
Sbjct: 169 VWPN-KVIASDIDEVAVEVAEANAKANDVADQLICIEAAGFDHPVLAEKAPFDLVFAN 225


>gi|58580325|ref|YP_199341.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|58424919|gb|AAW73956.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzae KACC10331]
          Length = 365

 Score = 59.0 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 32/198 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P   
Sbjct: 182 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVT 241

Query: 124 G-VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                +   +AL +A+ N        +      D  + +   +D IVSNPP+      D 
Sbjct: 242 VLDLYEAQTRALTLARRNLQGITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRADR 301

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV----- 233
                                   +      ++ L   G   +     + Y Q +     
Sbjct: 302 P--------------------DIGQRFIAVAAQALRPGGQLLLVANRHLPYEQVLNESFG 341

Query: 234 DVVRIFESRKLFLVNAFK 251
            V    E     L++A +
Sbjct: 342 QVRVAAERDGFKLISAIR 359


>gi|227114012|ref|ZP_03827668.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 295

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTIIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPADLSADVVVAN 230


>gi|313901576|ref|ZP_07835018.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM
           13965]
 gi|313468165|gb|EFR63637.1| ribosomal L11 methyltransferase [Thermaerobacter subterraneus DSM
           13965]
          Length = 354

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +LD+GTG+G + +A        + + +DI   A+ +A  NA  NGV+ER   
Sbjct: 190 VLDVGTGSGILAIA-AARLGAPRVLAIDIDPVAVRVAGENAAANGVAERIGL 240


>gi|303290222|ref|XP_003064398.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453996|gb|EEH51303.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 384

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 26/139 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
               + +++D+   TG   +            GVD S  AL++A  NA  NGV++R   +
Sbjct: 202 SAPGIRKVMDVCCYTGGFAVNAAL-GGASDVTGVDSSRPALDVAAKNASLNGVTDRIRWV 260

Query: 154 QSDWFSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           ++D F  ++        G +D+IV +PP +    V  +   V  +       G       
Sbjct: 261 KNDAFKHLDACLENGEAGTYDLIVLDPPKLAPN-VKSVARAVPKY------VGMN----- 308

Query: 206 YRTIADGVSRHLNKDGLCS 224
                    + L   G+  
Sbjct: 309 -----QRAMKLLRPGGILV 322


>gi|77461575|ref|YP_351082.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1]
 gi|77385578|gb|ABA77091.1| SAM-dependent methyltransferase [Pseudomonas fluorescens Pf0-1]
          Length = 398

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG +++   ++ D
Sbjct: 220 KGKRVLDLYSYIGGWGVQ-AAAFGASEVFCVDASGFALDGVERNAALNGFADKMTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVIV++PP       D                   +G   YR + 
Sbjct: 279 VFEALKELKASEERFDVIVADPPAFIKRKKDL-----------------KNGEGAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EQAMRLLNKDGILF 335


>gi|332703287|ref|ZP_08423375.1| Ribosomal protein L11 methyltransferase [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553436|gb|EGJ50480.1| Ribosomal protein L11 methyltransferase [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 282

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 60/174 (34%), Gaps = 34/174 (19%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  L   A++        R   R LDLGTG+G + +AL        G+GVDI  +A+  A
Sbjct: 127 TTALCLEAISELADAGHIRADQRFLDLGTGSGILGIALCTL--GLTGLGVDIDPQAITCA 184

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N   N   ++ +        +  G F ++V+N                        + 
Sbjct: 185 QENVSLNDC-DKLELSVGTV-DAARGPFQIVVAN------------------------IL 218

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
            G         +A  ++  L   G   +  I   Q   V R + ++ L      
Sbjct: 219 SGP-----LERMASDLAGLLAPGGRLILSGILDTQAEAVRRAYTAQDLPEPELR 267


>gi|317049678|ref|YP_004117326.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
 gi|316951295|gb|ADU70770.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
          Length = 372

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  +       ILDLG G G + L  L+++P  + +  D S  A+  ++ N  
Sbjct: 211 DIGARFFMQHLPHDIEGEILDLGCGNGVIGLMALEQNPQAEVLFFDESYMAVASSRLNVE 270

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R     ++  S         ++ NPP+ +          V D    ++    
Sbjct: 271 VNRPQDLARSQFRVNNALSGFPSDRLHAVLCNPPFHQ-------QHAVTDH---LAW--- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 318 --------QMLRDAKRCLQYGGEL 333


>gi|256843352|ref|ZP_05548840.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256849829|ref|ZP_05555260.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|262046925|ref|ZP_06019885.1| O-methyltransferase [Lactobacillus crispatus MV-3A-US]
 gi|293381203|ref|ZP_06627211.1| GIY-YIG catalytic domain protein [Lactobacillus crispatus 214-1]
 gi|256614772|gb|EEU19973.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256713318|gb|EEU28308.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|260572907|gb|EEX29467.1| O-methyltransferase [Lactobacillus crispatus MV-3A-US]
 gi|290922243|gb|EFD99237.1| GIY-YIG catalytic domain protein [Lactobacillus crispatus 214-1]
          Length = 343

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 25/174 (14%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+R+      F    +T  L   A          RD  ++ DL  G  A  + +      
Sbjct: 17  NLRIIQDKTAFSFSMDTLFLAYWAKDLI------RDKDKVADLCAGNCAATIYMA-YFNR 69

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIES 177
                ++I  +    A  +   N +  R    Q +  ++     +  +DV+  NPPY ++
Sbjct: 70  AHYDAIEIQNEVYSQAVRSVKLNEMENRISVFQDNVLNAGHFLRKDSYDVVTVNPPYFKA 129

Query: 178 VIVDCLGLE----VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +  +    +   +  I+L            I +  S  L   G   +  
Sbjct: 130 PKGHEVNPDRKKAIARHELLINL----------EQIIEVASGLLKMKGKMLMVH 173


>gi|291326559|ref|ZP_06124994.2| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM
           1131]
 gi|291313550|gb|EFE54003.1| ribosomal protein L11 methyltransferase [Providencia rettgeri DSM
           1131]
          Length = 319

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +      +G+DI  +A+  ++ NA  NGVSER       
Sbjct: 183 EGKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAITASRDNAQRNGVSERLSLYLPK 241

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 242 -DQPNDLQADVVVAN 255


>gi|169824993|ref|YP_001692604.1| RNA methyltransferase [Finegoldia magna ATCC 29328]
 gi|167831798|dbj|BAG08714.1| RNA methyltransferase [Finegoldia magna ATCC 29328]
          Length = 442

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 62  NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +S    F+P P      +     +L          + DL  GTG +     K+S 
Sbjct: 266 GLEFRISPFSFFQPNPAQA---EQIYTRALELAGDLSGKNVYDLYCGTGTIAQIFAKKSE 322

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
               +GV+I  +A+E AK NA  NG++   + +  D  + +E     DV+V +PP
Sbjct: 323 --SVIGVEIVEEAVEKAKENAELNGLTNT-EFICDDCLNFMEKVEKKDVVVLDPP 374


>gi|170717884|ref|YP_001784939.1| type I restriction-modification system, M subunit [Haemophilus
           somnus 2336]
 gi|168826013|gb|ACA31384.1| type I restriction-modification system, M subunit [Haemophilus
           somnus 2336]
          Length = 537

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 25/199 (12%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E    ++G   F         + + P   +++L   A   +L   + ++   + D
Sbjct: 177 RDILGEIYEYLIG--QFAANAGKKGGEFYTPHQVSKIL---AKLVTLDVADNQETFLVYD 231

Query: 104 LGTGTGAVCLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQ 154
              G+G++ L +  E P     K  G +++     +A+ N + +GVS         DTL+
Sbjct: 232 PTMGSGSLLLTVGNELPQSKPIKYYGQELNTTTYNLARMNLMMHGVSYKNMTLSNADTLE 291

Query: 155 SDWFSSVE--------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           SDW   ++          FD +V+NPPY          L+   F P  +L       + Y
Sbjct: 292 SDWPEGLDAQGIDQPLCRFDAVVANPPYSAKWDNHERKLKDARFQPFGALAPASK--ADY 349

Query: 207 RTIADGVSRHLNKDGLCSV 225
             I   +  HL + G  ++
Sbjct: 350 AFILHSL-YHLGEHGTMAI 367


>gi|332217837|ref|XP_003258071.1| PREDICTED: methyltransferase-like protein 5-like [Nomascus
           leucogenys]
          Length = 137

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G GA+ +            G DI   ALE+   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGALSIGTAMLGAGLCV-GFDIDEDALEMFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|297287705|ref|XP_002803204.1| PREDICTED: N(6)-adenine-specific DNA methyltransferase 1 isoform 2
           [Macaca mulatta]
          Length = 186

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 55/179 (30%), Gaps = 36/179 (20%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ +A       A  N V  +                                 +   V
Sbjct: 77  DINPEAAACTLETARCNKVHVQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLF 245
                  +  GG +G          V   L+  GL  +  I  N   ++++I +++ L 
Sbjct: 106 GSHGIEAAWAGGRNGREVMDRFFPLVPDLLSPRGLFYLVTIKENNPEEILKIMKTKGLQ 164


>gi|295094140|emb|CBK83231.1| 23S rRNA m(5)U-1939 methyltransferase [Coprococcus sp. ART55/1]
          Length = 550

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 10/116 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  +S  +F  +  T+   +     +   +       I DL +GTG +   L    P 
Sbjct: 280 GLQFKISPFSF-FQTNTKS-AERLYDKARSYVGDTKDAVIFDLYSGTGTIAQLLA---PV 334

Query: 122 FK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173
            K  +GV+I  +A+E A+ NA  NG+ +  + +  D       +E   D IV +PP
Sbjct: 335 AKKVIGVEIVEEAVEAARVNAELNGL-DNCEFIAGDVLKVIDEIEEKPDFIVLDPP 389


>gi|284048610|ref|YP_003398949.1| methyltransferase small [Acidaminococcus fermentans DSM 20731]
 gi|283952831|gb|ADB47634.1| methyltransferase small [Acidaminococcus fermentans DSM 20731]
          Length = 409

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 25/134 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LD  T TG   L   K         VDIS +AL+ A+ N   NG+ ++  T++++ 
Sbjct: 234 GKHVLDCFTHTGPFALNAAK-GGAASVTAVDISGEALKRARDNFALNGLEDKIQTVEANV 292

Query: 158 FSSV-------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           F  +       +  FD I+ +PP                   + +  G       Y+ I 
Sbjct: 293 FEYLTDLENKKQHPFDFIILDPPAFTKSSHTV----------KSAFRG-------YKEIN 335

Query: 211 DGVSRHLNKDGLCS 224
               + L + G  +
Sbjct: 336 LKAMKLLPRGGYLA 349


>gi|269925374|ref|YP_003321997.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789034|gb|ACZ41175.1| putative RNA methylase [Thermobaculum terrenum ATCC BAA-798]
          Length = 360

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E      I++LG G+G + +  L+  P    VGVDI  +AL  A+ N    G++ + D L
Sbjct: 203 EPSAGDVIVNLGCGSGTILIERLEMLPAKAVVGVDIDPEALACARRNVYAAGLTGKVDLL 262

Query: 154 QSDWFSS--VEGLFDVIVSNPPY 174
           + D  S+    G  DVI ++ P+
Sbjct: 263 RGDMRSTGLNSGFADVIYADLPF 285


>gi|238507277|ref|XP_002384840.1| methyltransferase LaeA-like, putative [Aspergillus flavus NRRL3357]
 gi|220689553|gb|EED45904.1| methyltransferase LaeA-like, putative [Aspergillus flavus NRRL3357]
          Length = 370

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 39/145 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   L     ++  R+LD+GTGTG   +    E P  + +G D+S             +
Sbjct: 124 ILKGELHAAPIKNPARVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPS 174

Query: 145 GV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  + RF+    +   S    FD       YI       L   +RD D           
Sbjct: 175 WIPPNLRFEVDDFEAPWSYSQPFD-------YIHGRE---LEGFIRDHD----------- 213

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI 227
                 +      +L   G    EI
Sbjct: 214 -----RLFRQALANLKPGGW--FEI 231


>gi|289675880|ref|ZP_06496770.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 153

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 41  LPHLPKNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWQATLGDR 100

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSNPPY 174
                  D          DV++ NPP+
Sbjct: 101 DVRIQAGDGLEMQEPDSLDVVLCNPPF 127


>gi|190574316|ref|YP_001972161.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Stenotrophomonas maltophilia K279a]
 gi|190012238|emb|CAQ45861.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Stenotrophomonas maltophilia K279a]
          Length = 419

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +   R++++GTG G   +   +           IS +   +A       G
Sbjct: 179 LDRICQQLQLKPGDRVVEIGTGWGGFAVHAARHY-GCHVTTTTISAEQHALAARRVREAG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++   L  D +  ++G FD +VS        +++ +G E                L  
Sbjct: 238 LQDQVTLLMQD-YRDLQGQFDKLVS------IEMIEAIGAEY---------------LDT 275

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y      + R L  DG+  +
Sbjct: 276 Y---MATLQRLLKPDGVALL 292


>gi|118575665|ref|YP_875408.1| methylase of polypeptide chain release factor [Cenarchaeum
           symbiosum A]
 gi|118194186|gb|ABK77104.1| methylase of polypeptide chain release factor [Cenarchaeum
           symbiosum A]
          Length = 165

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 31/152 (20%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P  +T LL D         I  R     LD+G GTG +  AL +       VG D+    
Sbjct: 2   PAEDTYLLEDC--------IAGRSGDAALDMGCGTGYISRALGRSFG--TVVGTDV--DM 49

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L +        G  +R  T+      ++   FD+IV NPPY+ +  +             
Sbjct: 50  LSL------RGGSMDR--TVCCTGADALSCTFDLIVCNPPYLATDGILDRST-------- 93

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              DGG  GL     +    +  L + G   V
Sbjct: 94  ---DGGRLGLEVPGRMVRSAAPLLKRGGSMLV 122


>gi|160876312|ref|YP_001555628.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS195]
 gi|160861834|gb|ABX50368.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS195]
 gi|315268501|gb|ADT95354.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS678]
          Length = 428

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+   + G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVESEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISL 196
           +S++   L  D + ++ G +D +VS    IE+V  + L    +  +    P       ++
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAI 295

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                    YR   D + R++   G        V     Q   VV       L      +
Sbjct: 296 TIADQRYDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLR 355


>gi|92112593|ref|YP_572521.1| cyclopropane-fatty-acyl-phospholipid synthase [Chromohalobacter
           salexigens DSM 3043]
 gi|91795683|gb|ABE57822.1| cyclopropane-fatty-acyl-phospholipid synthase [Chromohalobacter
           salexigens DSM 3043]
          Length = 421

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 26/154 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L +++      +L++GTG G + L   +           IS              G
Sbjct: 182 LDVILGKLDIGPEHHVLEIGTGWGGLALYAARTR-GCHVTTTTISEAQYAHTARRIREAG 240

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG---GIDG 202
           + +R   L+ D + ++EG +D +VS        +++ +G +  D    ++        DG
Sbjct: 241 LEDRITLLKQD-YRALEGRYDRLVSV------EMIEAVGHQYLD--TYLATVDRLLKDDG 291

Query: 203 LSHYRTI-------------ADGVSRHLNKDGLC 223
           L+  + I              D + R++   G  
Sbjct: 292 LALIQAITIRDQRYAAAKRDVDFIKRYIFPGGFL 325


>gi|91785249|ref|YP_560455.1| ribosomal protein L11 methyltransferase [Burkholderia xenovorans
           LB400]
 gi|123358450|sp|Q13U36|PRMA_BURXL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91689203|gb|ABE32403.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia xenovorans LB400]
          Length = 300

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVQPGQSVLDYGCGSGILAI-LAKKCGADPVYGIDIDPQAVESARHNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +       +   G FD++V+N
Sbjct: 212 ---RAEVTYGLPDACPTGEFDIVVAN 234


>gi|77464258|ref|YP_353762.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           2.4.1]
 gi|77388676|gb|ABA79861.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides
           2.4.1]
          Length = 333

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 50/198 (25%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++LLV++        +      R++DLG G G +  A+L+  P  +   V+    A
Sbjct: 170 PDRGSQLLVEA--------LPTDLSGRVVDLGAGWGYLARAVLERRPVKRIDLVEAEHAA 221

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A+ N       ER     +D     +    D++V NPP+  +   D           
Sbjct: 222 LDCARLNV----PDERAHFHWADATRFRLSKPADLVVCNPPFHTTREADP---------- 267

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVN 248
                    G+          +R L   G+  +     + Y++   +  +F         
Sbjct: 268 -------AIGMGF----LQAAARLLAPTGVLWLVANRHLPYDRG--LRTLFRE------- 307

Query: 249 AFKDYGGND--RVLLFCR 264
             +D GG+   R++   R
Sbjct: 308 -VEDIGGDAAFRIVRASR 324


>gi|110636195|ref|YP_676403.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium sp.
           BNC1]
 gi|110287179|gb|ABG65238.1| cyclopropane-fatty-acyl-phospholipid synthase [Chelativorans sp.
           BNC1]
          Length = 428

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 26/138 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +    +LD+G G G + L L  E+   +  G+ +S +  E A+  A      
Sbjct: 176 HIAAKLLVQSGASVLDIGCGWGGLALFLA-ETYGAEVTGITLSKEQHEYARQRAAAAPHG 234

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           ER +    D +  +EG FD IVS                V  F+          G++H+R
Sbjct: 235 ERPNFQLRD-YREIEGRFDRIVS----------------VGMFE--------HVGVNHFR 269

Query: 208 TIADGVSRHLNKDGLCSV 225
                    L  DG+  +
Sbjct: 270 EFFRKSHDLLADDGVLLL 287


>gi|296241975|ref|YP_003649462.1| methyltransferase [Thermosphaera aggregans DSM 11486]
 gi|296094559|gb|ADG90510.1| methyltransferase [Thermosphaera aggregans DSM 11486]
          Length = 287

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/147 (25%), Positives = 55/147 (37%), Gaps = 30/147 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L  S  RI +  +  +LD  TG G   +    E    K V  +I    L IA+ N  
Sbjct: 121 DATLKASRARIRQGSI--VLDTCTGLGYTAIT-SIERGASKIVSTEIDPTVLWIAERNPW 177

Query: 143 TNGV-SERFDTLQSDWFSSVEGL----FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + G+  ER   +  D  + V+ L    FD I+ +PP                     +  
Sbjct: 178 SRGLRDERITIINDDVLNLVKYLEDSFFDRIIHDPPRF------------------SAST 219

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCS 224
           G + GL  YR +     R L   G+  
Sbjct: 220 GDLYGLEFYRELF----RVLKPGGILY 242


>gi|302876654|ref|YP_003845287.1| PUA domain containing protein [Clostridium cellulovorans 743B]
 gi|307687328|ref|ZP_07629774.1| PUA domain containing protein [Clostridium cellulovorans 743B]
 gi|302579511|gb|ADL53523.1| PUA domain containing protein [Clostridium cellulovorans 743B]
          Length = 395

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
             +LD+ T TG+  L            G+DIS  A++  + NA  N + ++ + +  D F
Sbjct: 218 AEVLDVFTHTGSFALNAGIAGAK-HVTGLDISEHAVDFCRKNAELNNLQDKVEFVCGDAF 276

Query: 159 SSVE------GLFDVIVSNPP 173
             ++        +DV++ +PP
Sbjct: 277 EVMKNWAYEGKKYDVVIVDPP 297


>gi|195392497|ref|XP_002054894.1| GJ22549 [Drosophila virilis]
 gi|194152980|gb|EDW68414.1| GJ22549 [Drosophila virilis]
          Length = 466

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 20/170 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVR-----ILDLGTGTGA 110
           R ++  R +L S     R +  +L+  +S  + +  +I K+   R     I+D   G G 
Sbjct: 255 RKYWFRRFSLFS-----RFDQGILLDRESWFSVTPEKIAKQTARRLAGDVIVDAFCGCGG 309

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDV 167
             +     +   + + +DI    L +AK NA+  GV+ + + + +D+    SS     DV
Sbjct: 310 NAIQFA--NTCSRVIAIDIDANKLAMAKQNALIYGVAHKIEFVHADFLQFASSTRLRPDV 367

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +  +PP+      D L     D +  +   G    + H R + + +   L
Sbjct: 368 VFLSPPW---GGPDYLKQATFDIEQHLLPLGASQLMQHARRLTENIGFFL 414


>gi|159905750|ref|YP_001549412.1| hypothetical protein MmarC6_1367 [Methanococcus maripaludis C6]
 gi|159887243|gb|ABX02180.1| protein of unknown function Met10 [Methanococcus maripaludis C6]
          Length = 380

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 23/125 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++LD+ + TG    A+       +   VD+S KAL +A+ N   NGV   ++ + S
Sbjct: 206 KPGDKVLDVCSYTG--GFAVHAGIKGGEVTAVDLSEKALAVAEENMELNGVK-NYNFIVS 262

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID----GLSH 205
           + F +++        FDV+V +PP       D           + +L+        GL  
Sbjct: 263 NAFDAMKELINNNEKFDVVVLDPPAFTDSSKDI----------KNALNAYNSMNYLGLKL 312

Query: 206 YRTIA 210
            + I 
Sbjct: 313 AKRIL 317


>gi|126737214|ref|ZP_01752949.1| ribosomal protein L11 methyltransferase, putative [Roseobacter sp.
           SK209-2-6]
 gi|126721799|gb|EBA18502.1| ribosomal protein L11 methyltransferase, putative [Roseobacter sp.
           SK209-2-6]
          Length = 290

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 42/192 (21%)

Query: 73  EPRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    E  +  ++ D+G GT  + +A  +
Sbjct: 109 VPEGRIPLLIEAAMAFGTGHHGTTLGCLKALDHLIDEGFEGRKVADIGCGTAVLAMAAAR 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                  +  DI   A+E+A++N   NG+      L++  F           S  PY   
Sbjct: 169 VWEG-DFIASDIDEVAVEVAEANLKANGMEGAVTCLEAAGFDHPGLQ-----SCAPY--- 219

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVV 236
              D +   +    P ++L   + G             +L   G   +  I   Q  DVV
Sbjct: 220 ---DLIFANILKG-PLVALSPDLSG-------------NLRPGGFAILSGILNEQADDVV 262

Query: 237 RIFESRKLFLVN 248
            ++      LV 
Sbjct: 263 SVYAENGTNLVR 274


>gi|83776360|dbj|BAE66479.1| unnamed protein product [Aspergillus oryzae]
          Length = 370

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 46/145 (31%), Gaps = 39/145 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   L     ++  R+LD+GTGTG   +    E P  + +G D+S             +
Sbjct: 124 ILKGELHAAPIKNPARVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPS 174

Query: 145 GV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  + RF+    +   S    FD       YI       L   +RD D           
Sbjct: 175 WIPPNLRFEVDDFEAPWSYSQPFD-------YIHGRE---LEGFIRDHD----------- 213

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI 227
                 +      +L   G    EI
Sbjct: 214 -----RLFRQALANLKPGGW--FEI 231


>gi|310765267|gb|ADP10217.1| ribosomal RNA small subunit methyltransferase D [Erwinia sp.
           Ejp617]
          Length = 375

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 47/144 (32%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  +       I+DLG G G + L  L+++P  +   +D S  A+  ++ N  
Sbjct: 214 DVGARFFMQHLPDNIDGEIIDLGCGNGVIGLVALQQNPLAQVHFIDESYMAVASSRLNVE 273

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +   ++  +         ++ NPP+ +          V D          
Sbjct: 274 VNCPDDLARCEFRVNNALAGYPSDRLHAVLCNPPFHQ-------QNAVTDH--------- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 318 -----IAWQMFRDARRCLQYGGEL 336


>gi|303240654|ref|ZP_07327168.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2]
 gi|302591722|gb|EFL61456.1| Methyltransferase type 12 [Acetivibrio cellulolyticus CD2]
          Length = 235

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 27/149 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P    +V++ +        + +   ++DLG GTG +  A+    P  K   VDIS K L+
Sbjct: 33  PYYYQMVEAIVNTLP--FSRSEDFEVIDLGCGTGTISRAVKDAYPKAKITCVDISGKMLQ 90

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           IA      N V +        +  +    +DV+VS+           L   V +      
Sbjct: 91  IAA--GKLNDVQDAIYINSDFYEFNFGRKYDVVVSSL---------ALHHLVTN------ 133

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                D L  YR I       LN  G+  
Sbjct: 134 ----EDKLDFYRKIYSS----LNTGGIFI 154


>gi|289766407|ref|ZP_06525785.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D11]
 gi|289717962|gb|EFD81974.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D11]
          Length = 312

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKFLGAGEVYGTDIDEFSMEVAKENLILNN 220

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   E   L +V         + R + 
Sbjct: 252 DVLVKLLDEIKYILKENSIVLFSGIIEDKLNEVISKAEDVGLEVVQVK---ANKEWRAVY 308

Query: 262 FCR 264
           F R
Sbjct: 309 FKR 311


>gi|256028487|ref|ZP_05442321.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. D11]
          Length = 310

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 37/183 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 160 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKFLGAGEVYGTDIDEFSMEVAKENLILNN 218

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S      L+ +    +E   FD++V N                      ++        
Sbjct: 219 ISLNDVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 249

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKDYGGND-RVLL 261
                + D +   L ++ +     I  ++  +V+   E   L +V         + R + 
Sbjct: 250 DVLVKLLDEIKYILKENSIVLFSGIIEDKLNEVISKAEDVGLEVVQVK---ANKEWRAVY 306

Query: 262 FCR 264
           F R
Sbjct: 307 FKR 309


>gi|223039768|ref|ZP_03610053.1| methyltransferase small domain family [Campylobacter rectus RM3267]
 gi|222878960|gb|EEF14056.1| methyltransferase small domain family [Campylobacter rectus RM3267]
          Length = 231

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 19/137 (13%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E      +LD+G G+G + L L ++ P      +DI    + +A +NA  NG+   F T 
Sbjct: 25  EGGARGEVLDVGCGSGVLGLLLKRDFPKISLSLLDILEANVNLAAANASQNGLEAEFITA 84

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-----DFDPRISLDGGIDGLSHYRT 208
               F S E  FD+IVSNPP+    +       +R     +  P  +L            
Sbjct: 85  DFAKFKS-EKRFDLIVSNPPFYHDGVKKSENEHLRTSRYSENLPLSAL------------ 131

Query: 209 IADGVSRHLNKDGLCSV 225
                +  L   G+ S 
Sbjct: 132 -VRTANSLLKPRGVFSF 147


>gi|318042281|ref|ZP_07974237.1| methyltransferase [Synechococcus sp. CB0101]
          Length = 419

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 55/168 (32%), Gaps = 33/168 (19%)

Query: 82  VDSALAFSL----PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           VD+A A       PR      +R+LD G GTG     L   +P  + + VDIS   LE+A
Sbjct: 54  VDAAYAACTGAVAPRSADGAPLRVLDAGCGTGVSTDYLAHLNPGAEILAVDISPGTLEVA 113

Query: 138 KSNAVTNGVSERFDTL---QSDWFSSVEGLFDVIVS--------NPPYIESVIVDCLGLE 186
           +     +G  ++       +S      EG FD I S         P      +   L   
Sbjct: 114 RERVRRSGGHQQAQVRIENRSLLELEGEGPFDYINSVGVLHHLRQPEAGLKALAALLKPG 173

Query: 187 VRDF----------DPR---ISLDG-----GIDGLSHYRTIADGVSRH 216
                         +      +L       G  GL   R +   +  H
Sbjct: 174 ALLHLFLYADGGRWEIHRTQRALTAMGVGTGEQGLRLGRQLLAELPEH 221


>gi|171318514|ref|ZP_02907666.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           MEX-5]
 gi|171096300|gb|EDT41206.1| ribosomal protein L11 methyltransferase [Burkholderia ambifaria
           MEX-5]
          Length = 300

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L ++      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LARKCGANPVVGIDIDPQAVESARQNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 AEVTYGLPDACPAGEFDIVVANILSNP 239


>gi|126642229|ref|YP_001085213.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ATCC 17978]
 gi|184158706|ref|YP_001847045.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ACICU]
 gi|183210300|gb|ACC57698.1| ribosomal protein L11 methyltransferase [Acinetobacter baumannii
           ACICU]
          Length = 279

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE---TELLVDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   T + +D  LAF           L  + K DV
Sbjct: 78  WMDYYEPIQIGEKFWIVPEWLEP-PEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDV 136

Query: 99  VR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      +
Sbjct: 137 KDKIVIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLYVGLPE 195

Query: 157 WFSS--VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
            F         DV+V+N   I +  +  L  E   +   D   +L G
Sbjct: 196 EFDQEFKPQQADVLVAN---ILAGPLMALAPEFAKLLKSDGDFALAG 239


>gi|282164174|ref|YP_003356559.1| putative methyltransferase [Methanocella paludicola SANAE]
 gi|282156488|dbj|BAI61576.1| putative methyltransferase [Methanocella paludicola SANAE]
          Length = 197

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 4/74 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG GTG + +         K +G+D   +ALEIAK NA    V      +  D    
Sbjct: 50  VADLGCGTGVLAIG-AGLLGTKKIIGIDSDIRALEIAKKNASQLDVD--IAWVCCDV-RD 105

Query: 161 VEGLFDVIVSNPPY 174
             G FD +V NPP+
Sbjct: 106 FCGRFDTVVMNPPF 119


>gi|117919559|ref|YP_868751.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella sp. ANA-3]
 gi|143581951|sp|A0KU76|RUMA_SHESA RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|117611891|gb|ABK47345.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Shewanella sp. ANA-3]
          Length = 449

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 32/188 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++  T  +         + +V  AL +  P+       RILDL  G G   L L K    
Sbjct: 272 SLTFTPGNFVQVNAQINKTMVAQALEWLAPQ----PGERILDLFCGMGNFSLPLAKL--G 325

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + +GV+   + +  A+ NA  NG+S        D  + +        S  P++  +   
Sbjct: 326 AEVIGVEGVPEMVSQARENAAANGLS-NLTFYHGDLSADL--------SCEPWMGKIDKL 376

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYN-QKV 233
            L           +  G  + L   + +              L +D    +E GY  QK+
Sbjct: 377 LLDP---------ARAGAFESLQWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKL 427

Query: 234 DVVRIFES 241
            ++ +F  
Sbjct: 428 GLIDMFPQ 435


>gi|307152516|ref|YP_003887900.1| type 11 methyltransferase [Cyanothece sp. PCC 7822]
 gi|306982744|gb|ADN14625.1| Methyltransferase type 11 [Cyanothece sp. PCC 7822]
          Length = 223

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 29/146 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++A A     +   ++ ++LD GTGT  + + + ++ P ++ V +D++   L+I + N 
Sbjct: 27  VNNAFAQRAMEL-APNIAKVLDAGTGTARIPILICQQRPGWQVVAIDLAQSMLDIGRKNI 85

Query: 142 VTNGVSERF--DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               ++ER   + + S      +  FDV++SN       ++  L                
Sbjct: 86  EQANLTERIQLELVDSKQMPYPDHYFDVVLSN------SLIHHL---------------- 123

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D L         V R L   G   +
Sbjct: 124 ADPLPF----LLSVKRVLKPGGAILL 145


>gi|300869152|ref|ZP_07113749.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
 gi|300332851|emb|CBN58947.1| methyltransferase type 11 [Oscillatoria sp. PCC 6506]
          Length = 440

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A      ++ + +   ILD G G+G   L L + +P  K VG+D+S +++ +A+     
Sbjct: 44  TAYYIRNQKVIETEGKVILDAGCGSGYKSLILAEANPGAKIVGIDLSEESVNLARQRLQY 103

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVS 170
           +G     F  L  +   S+   FD I  
Sbjct: 104 HGFENIDFQALSIEELPSLNQQFDYINC 131


>gi|268326444|emb|CBH40032.1| conserved hypothetical protein, SAM-dependent methyltransferase
           type 11 family [uncultured archaeon]
          Length = 260

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 71  TFEPRP-ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            F+ RP +      +A          +  ++ILD+GTGTG + ++L +     + +G+DI
Sbjct: 18  YFDKRPGDRTEEQRNAWKQFFLEKLGKKPLKILDVGTGTGFLSISLAE--IGHEVMGIDI 75

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           S   L  A+  A   G++       ++  S  +  FD++VSN
Sbjct: 76  SEGMLSQARKKAEKRGLNFDLRIEDAESLSLEDETFDIVVSN 117


>gi|163791114|ref|ZP_02185533.1| ribosomal protein L11 methyltransferase (putative) [Carnobacterium
           sp. AT7]
 gi|159873586|gb|EDP67671.1| ribosomal protein L11 methyltransferase (putative) [Carnobacterium
           sp. AT7]
          Length = 317

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 39/163 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ILD+GTG+G + +A  K          D+   A++ A  N   N  ++      +
Sbjct: 174 RGNETILDVGTGSGVLSIA-SKALGAKHVHAYDLDDVAVKAAVENINLNDYAKDVVVKAN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    D++V+N                      ++             +      
Sbjct: 233 DLLKGVTIEADIVVAN---------------------ILA--------EIIVPLIPEAYE 263

Query: 216 HLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNA--FKD 252
            L   GL      +E   ++K  ++   + +   ++     KD
Sbjct: 264 ALKPGGLFLTSGIIE---DKKELILSEQKKQGFTIIQVQQMKD 303


>gi|221134110|ref|ZP_03560415.1| rRNA (guanine-N(2)-)-methyltransferase [Glaciecola sp. HTCC2999]
          Length = 362

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 33/153 (21%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE----------SPFFKGVGVDISCK 132
           D      L  + +     +LD   G G +   +              P    V  DI   
Sbjct: 184 DLGTHLLLQHLPQNIKNDVLDFACGAGVIAAFVGVRHLHTFPDPNNRPNLHLVLSDIHAL 243

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +L  A+     N +    D + S+  S+VEG F  I++NPP+ + +  D           
Sbjct: 244 SLYCAQKTLHLNNLQG--DVVASNGLSNVEGKFSHIITNPPFHKGINTD----------- 290

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      S   +       HL + G  ++
Sbjct: 291 ----------YSIAHSFLVQAREHLIEQGHLTL 313


>gi|46105458|ref|XP_380533.1| hypothetical protein FG00357.1 [Gibberella zeae PH-1]
          Length = 254

 Score = 58.6 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 72/191 (37%), Gaps = 36/191 (18%)

Query: 69  SDTFEPRPETELLVDSALAFS----LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
              +EP  ++ LL+D+  + S    L          ++++GTG+G V   +   +    G
Sbjct: 13  ERVYEPAEDSYLLLDTLSSASETEYLQNAFPDAAPLVVEVGTGSGVVLAFVHAHAQKLFG 72

Query: 125 VGVDISC--KALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------EGLFDVIV 169
               ++        A     T G   + ++   D  +S              EG  DV++
Sbjct: 73  TRQVLTAGVDMNAFACR--ATVGTVAKAESDNPDTHASYLGSCMGDLTTSMREGAIDVLI 130

Query: 170 SNPPYIESVIVDCLGLE-VRD---------FDP---RISL--DGGIDGLSHYRTIADGVS 214
            NPPY+ +  +       V D         FD     ++L   GG+DG+     + + + 
Sbjct: 131 FNPPYVPTPEMPARPDTFVADDLGVTSKTSFDDDSYLLALSYAGGVDGMETTDRLIEALP 190

Query: 215 RHLNKDGLCSV 225
           R L++ G   +
Sbjct: 191 RTLSRRGCAYL 201


>gi|300121541|emb|CBK22060.2| unnamed protein product [Blastocystis hominis]
          Length = 628

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 10/111 (9%)

Query: 46  LKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDL 104
           LK E     +  R F ++   +S   F    +    V   L  ++   +   +   +LD+
Sbjct: 401 LKGEPF---IEERLF-DLSFRVSPYAFF---QVNTPVAEVLYKNIGDWLSLHENTLLLDV 453

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
             GTG + L L     F   +GVDI   A+E A+ NA  NG+         
Sbjct: 454 CCGTGTIGLCLASRVKFL--IGVDIEASAIEDARLNAEANGIKNCEFICSP 502


>gi|256830634|ref|YP_003159362.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM
           4028]
 gi|256579810|gb|ACU90946.1| ribosomal L11 methyltransferase [Desulfomicrobium baculatum DSM
           4028]
          Length = 284

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  L   AL               LDLGTG+G + +A +K      G G+DI   A++ A
Sbjct: 129 TTALCLEALDRLATEGVLTPGQSFLDLGTGSGILGIAAVKL--GLVGQGLDIDPVAVDNA 186

Query: 138 KSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171
             NA  N V++ F            E  FD I++N
Sbjct: 187 HENAALNAVTDAFRPATGSVTDIPREQHFDCILAN 221


>gi|16331764|ref|NP_442492.1| delta(24)-sterol C-methyltransferase [Synechocystis sp. PCC 6803]
 gi|1001725|dbj|BAA10562.1| delta(24)-sterol C-methyltransferase [Synechocystis sp. PCC 6803]
          Length = 317

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 50/147 (34%), Gaps = 30/147 (20%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+   LA+++P+   +   +ILDLG G G   L L ++    + +G  +S   +E A   
Sbjct: 79  LIKELLAWAVPQNSAKPR-KILDLGCGIGGSSLYLAQQ-HQAEVMGASLSPVQVERAGER 136

Query: 141 AVTNGV--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           A   G+  + +F    +         FD + S              LE  +  P  +   
Sbjct: 137 ARALGLGSTCQFQVANALDLPFASDSFDWVWS--------------LESGEHMPNKA--- 179

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
                           R L   G   +
Sbjct: 180 ---------QFLQEAWRVLKPGGRLIL 197


>gi|108804210|ref|YP_644147.1| hypothetical protein Rxyl_1372 [Rubrobacter xylanophilus DSM 9941]
 gi|108765453|gb|ABG04335.1| conserved hypothetical protein 95 [Rubrobacter xylanophilus DSM
           9941]
          Length = 177

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 66/203 (32%), Gaps = 39/203 (19%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G      VRL        P  +    V  +L  +L +    +   +LDL  GTGA+ +
Sbjct: 2   ISGEA--RGVRLAPVPPGVRPTSDR---VRESLFNALGQF--FEGGEVLDLYAGTGALGI 54

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDV 167
             L      + V V+ S +A    + N    G+  R   +  D    +E L      F++
Sbjct: 55  EALSRGCD-RAVFVEKSPRAAAAIRENLRRTGLEGRARVVVGDAVREMERLLRDGKVFNL 113

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I ++PPY                  RI+   G +GL             L   G   +E 
Sbjct: 114 IFADPPY------------------RIAP-AGAEGL------LRRAEALLAPGGRFILES 148

Query: 228 GYNQKVDVVRIFESRKLFLVNAF 250
           G    +             V  F
Sbjct: 149 GEEPALAEKGETRRYGGTFVTIF 171


>gi|70991803|ref|XP_750750.1| RNA methylase family protein [Aspergillus fumigatus Af293]
 gi|66848383|gb|EAL88712.1| RNA methylase family protein, putative [Aspergillus fumigatus
           Af293]
 gi|159124312|gb|EDP49430.1| RNA methylase family protein, putative [Aspergillus fumigatus
           A1163]
          Length = 238

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + R        ++D   G G   +A  +   + +   ++ +   L+ A
Sbjct: 55  TPEPVANKIAEDIARAAPSGRSILVDAFAGAGGNTIAFARTGKWKRVYAIEKNPAVLQCA 114

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV+++    + D FS ++        + VI ++PP+            +R  +
Sbjct: 115 KHNAQVYGVADKITWFEGDCFSILKNQLKELAPYSVIFASPPWGGPGYRSDEVFNLRTME 174

Query: 192 P 192
           P
Sbjct: 175 P 175


>gi|282882158|ref|ZP_06290797.1| RNA methyltransferase [Peptoniphilus lacrimalis 315-B]
 gi|281297923|gb|EFA90380.1| RNA methyltransferase [Peptoniphilus lacrimalis 315-B]
          Length = 441

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +   I+     ++LDL  GTG +     K++     +GV+I  +A+  A+ NA  N +S 
Sbjct: 288 AFDMIDNLQGKKVLDLYCGTGTISQVFAKKAE--SVLGVEIVEEAVNAARENAQYNNIS- 344

Query: 149 RFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             D +  D     + ++   D+I+ +PP +       L   + DF P   L 
Sbjct: 345 NVDFIAGDVAKVVNDLDIKADIIILDPPRVGINNPKALDK-IIDFSPEEFLY 395


>gi|321451313|gb|EFX63009.1| hypothetical protein DAPPUDRAFT_269241 [Daphnia pulex]
          Length = 253

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           I+D+  G G   +         + + +DI    +E+A+ NA   GV++R + +  D+F  
Sbjct: 92  IVDVFCGAGGNSIQFA--FKCERVIAIDIDPSKIELARHNASVYGVADRIEFIVGDFFQL 149

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +     DV+  +PP+     +      + D  P      GID     + I   ++  L
Sbjct: 150 APSLKADVVFLSPPWGGPKYLSAPQFCLEDMQPN-----GIDIFEAAQKITPNLAYCL 202


>gi|224369821|ref|YP_002603985.1| PrmA4 [Desulfobacterium autotrophicum HRM2]
 gi|223692538|gb|ACN15821.1| PrmA4 [Desulfobacterium autotrophicum HRM2]
          Length = 218

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 30/143 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L+F L  I      R L++G G G   L   K          + +  A++ A++NAV 
Sbjct: 62  AVLSFHLSTITPDPGKRFLEIGAGMGVAGLVGAKL--GHSMTITEYNTDAIKFARANAVL 119

Query: 144 NGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N + +  D  + DW + + EG FD I+ +    +   +  L            L      
Sbjct: 120 NNI-DTVDIRELDWNNPLIEGKFDYIIGSEVVFKEKDILGLHQ----------LF----- 163

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                       R+L   G   +
Sbjct: 164 -----------QRYLKPGGTIIL 175


>gi|320589949|gb|EFX02405.1| duf890 domain containing protein [Grosmannia clavigera kw1407]
          Length = 495

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVGVDISC 131
            P   T +L    L  S       + +  LD+GTG   +  L    + P +  V  DI  
Sbjct: 83  VPSRHTYILWLKMLLDSSSSGRATEPLIGLDIGTGASCIYPLLGCVQRPDWCFVATDIDE 142

Query: 132 KALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEG--LFDVIVSNPPYIESVIVDCLG 184
            +L  A++N   N + +R   L              G       ++NPP+ ES       
Sbjct: 143 DSLGCARANVRRNQLEDRIRVLPVRTPDDRLIPDETGSRPLSFTMTNPPFYESAAEMTAS 202

Query: 185 LEVRDFDPR 193
              ++  P 
Sbjct: 203 ARAKERPPH 211


>gi|298491107|ref|YP_003721284.1| methyltransferase ['Nostoc azollae' 0708]
 gi|298233025|gb|ADI64161.1| methyltransferase ['Nostoc azollae' 0708]
          Length = 195

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 36/168 (21%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP +  + ++        I   D    LDL TG+G++  A          VG+++S +A 
Sbjct: 20  RPTSARVREAVFNIWQGTI---DGCCWLDLCTGSGSMG-AEALCRGASLVVGIELSSRAC 75

Query: 135 EIAKSNAVTNGVSER-FDTLQSDWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRD 189
            I + N       E+ F  L+ +    ++      FD I  +PPY            +  
Sbjct: 76  AIIQENWQQVATKEQKFQILRGNLLQQLKKLSSQKFDRIYFDPPY-----------AIGL 124

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN--QKVDV 235
           ++P ++       L+ Y        + LN  G  +VE      Q  ++
Sbjct: 125 YEPVLA------ALAQY--------QLLNTHGEIAVEHSPQNFQPPEI 158


>gi|307731030|ref|YP_003908254.1| 50S ribosomal protein L11 methyltransferase [Burkholderia sp.
           CCGE1003]
 gi|307585565|gb|ADN58963.1| ribosomal protein L11 methyltransferase [Burkholderia sp. CCGE1003]
          Length = 300

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGADPVYGIDIDPQAVESARHNSERNR 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +           E +   I+SNP
Sbjct: 213 AEVTYGLPDECPAGQFEIVVANILSNP 239


>gi|290954674|ref|YP_003485856.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces scabiei
           87.22]
 gi|260644200|emb|CBG67276.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Streptomyces scabiei 87.22]
          Length = 449

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     ++  R+  R+LD+G G G++ +    E    + VGV IS +   +A+    
Sbjct: 196 EAKLDLVCRKLALREGQRLLDVGCGWGSLAMH-AAERYGVQVVGVTISVEQAALARERVA 254

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+    +    D+    +  FD I S            +   V              G
Sbjct: 255 AAGLEHLVEIRVQDYRQIDDSPFDAISS----------IGMAEHV--------------G 290

Query: 203 LSHYRTIADGVSRHLNKDGLCS 224
              YR  AD + R L   G   
Sbjct: 291 KKRYRAYADILHRLLKPGGRLL 312


>gi|239941808|ref|ZP_04693745.1| putative cyclopropane fatty acid synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239988268|ref|ZP_04708932.1| putative cyclopropane fatty acid synthase [Streptomyces roseosporus
           NRRL 11379]
 gi|291445255|ref|ZP_06584645.1| cyclopropane fatty acid synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291348202|gb|EFE75106.1| cyclopropane fatty acid synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 439

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  ++  R+LD+G G G++ +   +     +  G+ +S +    A+      G
Sbjct: 186 LDLVCRKLGLKEGDRLLDVGCGWGSMAIHAARHY-GARVTGITLSREQAAHARKRIAEEG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 245 LTDRIEIRVQDYRDVHDGPYDAISS-------IGMAEHVGSVR----------------- 280

Query: 206 YRTIADGVSRHLNKDGLCS 224
           YR  A+ +   L   G   
Sbjct: 281 YREYAEDLYALLKPGGRLL 299


>gi|254506473|ref|ZP_05118615.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           16]
 gi|219550647|gb|EED27630.1| ribosomal protein L11 methyltransferase [Vibrio parahaemolyticus
           16]
          Length = 295

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +          EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|156545326|ref|XP_001605756.1| PREDICTED: similar to CG1239-PA [Nasonia vitripennis]
          Length = 880

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 61/185 (32%), Gaps = 38/185 (20%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
               +  L + +  +  R + + L D+ L     R E      ILD+G   G + L++ +
Sbjct: 516 AKMQDSNLEIITRYYGYRNQHQNL-DTRLTVFTQRKELFYGKDILDIGCNIGHITLSVAR 574

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTN--------GVSERFDTLQSD-------WFSSVE 162
           +       G+DI  K + IA+ N            G       +Q +         SS +
Sbjct: 575 DFSARSVTGIDIDKKLINIARKNVKHYVNCHNDHKGFPYNVTFVQGNYILEDDALLSSEQ 634

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH-YRTIADGVSRHLNKDG 221
             FD I+         I   + L             G  GL   ++ +       L   G
Sbjct: 635 PQFDTIIC------LSITKWIHLNF-----------GDAGLKQSFKRMHAQ----LRPGG 673

Query: 222 LCSVE 226
           +  +E
Sbjct: 674 VLILE 678


>gi|85703285|ref|ZP_01034389.1| hypothetical protein ROS217_21127 [Roseovarius sp. 217]
 gi|85672213|gb|EAQ27070.1| hypothetical protein ROS217_21127 [Roseovarius sp. 217]
          Length = 398

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 24/135 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+ +  G   LA L        + VD S  AL +A   A   G SERF T + D
Sbjct: 224 KGARVLDMFSHVGGFSLAALASGAD-HALAVDGSEPALSLAADGAARMGASERFTTRRGD 282

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +E        FDV++ +PP                            GL  Y  +A
Sbjct: 283 AFDVMEALAAEGARFDVVICDPPAFAPTKQAM-----------------EKGLRAYERVA 325

Query: 211 DGVSRHLNKDGLCSV 225
              +  +   G   +
Sbjct: 326 RLATPLVAPGGYLVL 340


>gi|57168061|ref|ZP_00367200.1| cyclopropane fatty acid synthase (cfa) [Campylobacter coli RM2228]
 gi|305431787|ref|ZP_07400954.1| cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter coli
           JV20]
 gi|57020435|gb|EAL57104.1| cyclopropane fatty acid synthase (cfa) [Campylobacter coli RM2228]
 gi|304444871|gb|EFM37517.1| cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter coli
           JV20]
          Length = 387

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ +   ++LD+G G G + +   ++    K VGV IS +  + A+       
Sbjct: 150 IEHTLKKLDLKPNEKLLDIGCGWGWLSIMAAQKY-GVKVVGVTISEEQCKKAQERVRELK 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + +R +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDRVEIRLQNYQDLEFEDYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +       + L   G   +
Sbjct: 249 YFMK-----AKQVLKPGGSMLL 265


>gi|322504877|emb|CBZ14664.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 604

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 24/137 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++ L       E      +LDL +GTG + L L K     + +G+++   A+  A+ NA
Sbjct: 387 METMLTKVTEVAELSTGTTLLDLCSGTGTIGLTLSKHVR--RVIGIELVESAVANARRNA 444

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG++   +         VE L   ++S  P  +   +      V   DP  +   G++
Sbjct: 445 QQNGIA-NAEFHCGR----VEHLLPSVISGLPAEDRGDI------VVILDPPRA---GVN 490

Query: 202 --------GLSHYRTIA 210
                   G+   R + 
Sbjct: 491 STVLKWIRGMETIRRVV 507


>gi|300813455|ref|ZP_07093799.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512404|gb|EFK39560.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 275

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 38/183 (20%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI------SCKAL 134
           L    +  +   ++  D    LD+G G+GA+ +A  K++P    VG DI      S  + 
Sbjct: 90  LAKIIIEKTADYLKIPDGGVGLDVGCGSGALSIACAKKNPKATMVGCDIWSGSYKSEFSK 149

Query: 135 EIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           ++ ++NA   G+ + RF+   +      +  FD + SN  Y      +            
Sbjct: 150 KVCENNAKLEGLENVRFEEGNAVILPFEDQSFDAVTSNYVYHNIAGKNK----------- 198

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLFLV 247
                        + +     R L K G+  +         Y      +   +      V
Sbjct: 199 -------------QKLLLETFRVLKKGGVFVI-HDLMSKSRYGDMNKFIEKLKKDGYQDV 244

Query: 248 NAF 250
              
Sbjct: 245 QLI 247


>gi|302846254|ref|XP_002954664.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f.
           nagariensis]
 gi|300260083|gb|EFJ44305.1| hypothetical protein VOLCADRAFT_33370 [Volvox carteri f.
           nagariensis]
          Length = 214

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 13/130 (10%)

Query: 84  SALAFSLP--RIEKRDVVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKSN 140
             L   LP    +    +++++ GTG G  V  AL          G +++  +  +A+ N
Sbjct: 14  QVLEKMLPIAAADSERPLKVVEFGTGDGKPVINALNVTRLGCVVYGFELNPISAGLARDN 73

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A   G+SER+    S   S   G    +++NPPY+ +   D L  E         L GG+
Sbjct: 74  AAAFGMSERYQVGTSAPNSPTAGAV-CLIANPPYLPAPNSDILMPE---------LHGGV 123

Query: 201 DGLSHYRTIA 210
           DG    R++ 
Sbjct: 124 DGGELTRSLL 133


>gi|254253299|ref|ZP_04946617.1| Ribosomal protein L11 methylase [Burkholderia dolosa AUO158]
 gi|124895908|gb|EAY69788.1| Ribosomal protein L11 methylase [Burkholderia dolosa AUO158]
          Length = 300

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      VG+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVKPGQSVLDYGCGSGILAI-LAKKCGADPVVGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +   +   +   G FD++V+N
Sbjct: 212 ---RAEVTYALPDACPTGEFDIVVAN 234


>gi|323492070|ref|ZP_08097232.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG
           20546]
 gi|323313631|gb|EGA66733.1| ribosomal protein L11 methyltransferase [Vibrio brasiliensis LMG
           20546]
          Length = 295

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWREIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +          EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADQLEVFLPQ--DQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|304555603|ref|NP_001182134.1| tRNA (uracil-5-)-methyltransferase homolog A isoform 4 [Mus
           musculus]
 gi|51316456|sp|Q8BNV1|TRM2A_MOUSE RecName: Full=tRNA (uracil-5-)-methyltransferase homolog A;
           AltName: Full=HpaII tiny fragments locus 9c protein
 gi|26348397|dbj|BAC37838.1| unnamed protein product [Mus musculus]
          Length = 574

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 14/131 (10%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G +    D   +   +S   F    +        L   +    +      +
Sbjct: 370 EGLPLEHMAGDQCIQEDLLGLTFRISPHAFF---QVNTPAAEVLYTVIQEWAQLDGGSTV 426

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LD+  GTG + LAL  +    + VG+++  +A+E A+ NA+TN         +    +  
Sbjct: 427 LDVCCGTGTIGLALAPKVK--RVVGIELCQEAVEDARMNALTNDSKVILAIRK----AEN 480

Query: 162 EGLFDVIVSNP 172
                 +  NP
Sbjct: 481 IKRLLYVSCNP 491


>gi|116512581|ref|YP_811488.1| O-methyltransferase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108235|gb|ABJ73375.1| Predicted O-methyltransferase [Lactococcus lactis subsp. cremoris
           SK11]
          Length = 227

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
              RIL++GT  G   L + +E P  + V +D + + +E+AK N        +    +  
Sbjct: 68  KPKRILEIGTAIGFSALVMAQEVPEAEIVTIDRNPEMIELAKKNLTKYDHRNQIQLKEGD 127

Query: 156 --DWFSSVEGLFDVIVS 170
             D    ++G FD++  
Sbjct: 128 AADVLQELKGPFDLVFM 144


>gi|330815485|ref|YP_004359190.1| Ribosomal protein L11 methyltransferase [Burkholderia gladioli
           BSR3]
 gi|327367878|gb|AEA59234.1| Ribosomal protein L11 methyltransferase [Burkholderia gladioli
           BSR3]
          Length = 300

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G G+G + + L K+    + +G+DI  +A+E A+ N+  N    R +         
Sbjct: 169 VLDYGCGSGILAI-LAKKCGAGRVIGIDIDPQAVESARHNSERN----RAEVSYGLPDDC 223

Query: 161 VEGLFDVIVSN 171
             G FD++V+N
Sbjct: 224 PAGEFDIVVAN 234


>gi|148652983|ref|YP_001280076.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter sp.
           PRwf-1]
 gi|148572067|gb|ABQ94126.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter sp.
           PRwf-1]
          Length = 453

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 31/224 (13%)

Query: 52  HRILG---WRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  +  P           L      +E      ++++GTG
Sbjct: 184 HYDLGNDMYQSFLDDSMMYSSAIYPAPGATLYEAQQHKLKTLCTLLELTPEDHVIEIGTG 243

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G   +         +     IS    E AK      G+S +   L+ D +  +EG +D 
Sbjct: 244 WGGFAIYAATHY-GCQVTTTTISDAQYEEAKRRVHQAGLSSKITLLKQD-YRHLEGQYDK 301

Query: 168 IVSNPPYIESVIVDCLGLEVR---------DFDPR--ISLDG---GIDGLSHYRTIADGV 213
           ++S        +V+ +G E              P   ++L        G   Y + AD +
Sbjct: 302 LIS------IEMVEAVGHEYLPTFFAKCNALLKPNGIMALQAITFNDQGYDDYLSSADFI 355

Query: 214 SRHLNKDGLCSV--EIGY---NQKVDVVRIFESRKLFLVNAFKD 252
             H+   G      EI      Q   V++             +D
Sbjct: 356 QSHIFPGGCLLSNQEISNQFTQQTDMVMKSLIDYGYDYAQTLRD 399


>gi|126463100|ref|YP_001044214.1| methyltransferase small [Rhodobacter sphaeroides ATCC 17029]
 gi|126104764|gb|ABN77442.1| 16S rRNA m(2)G 1207 methyltransferase [Rhodobacter sphaeroides ATCC
           17029]
          Length = 333

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 50/198 (25%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   ++LLV++        +      R++DLG G G +  A+L+  P  +   V+    A
Sbjct: 170 PDRGSQLLVEA--------LPTDLSGRVVDLGAGWGYLARAVLERRPVKRIDLVEAEHAA 221

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           L+ A+ N       +R     +D     +    D++V NPP+  S   D           
Sbjct: 222 LDCARFNI----PDKRAHFHWADATRFRLSKPADLVVCNPPFHTSREADP---------- 267

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVN 248
                    G+          +R L   G+  +     + Y++   +  +F         
Sbjct: 268 -------AIGMGF----LQAAARLLAPTGVLWLVANRHLPYDRG--LRTLFRE------- 307

Query: 249 AFKDYGGND--RVLLFCR 264
             +D GG+   R++   R
Sbjct: 308 -VEDIGGDAAFRIVRASR 324


>gi|284161594|ref|YP_003400217.1| hypothetical protein Arcpr_0478 [Archaeoglobus profundus DSM 5631]
 gi|284011591|gb|ADB57544.1| protein of unknown function Met10 [Archaeoglobus profundus DSM
           5631]
          Length = 277

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++  R+L +  G G   + + K +   + +GV+++ KA+E  + N   N V       + 
Sbjct: 119 KEGERVLVMFAGVGPYAIVIAKLAKPSEVIGVELNPKAVEYFRKNVKLNKVEGIVKVYEG 178

Query: 156 DWFS---SVEGLFDVIVSNPPYIESV 178
           D       +EG FD I+   PY    
Sbjct: 179 DVRDVVPKLEGKFDRILMPAPYSAEN 204


>gi|227508000|ref|ZP_03938049.1| methyltransferase family protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227192544|gb|EEI72611.1| methyltransferase family protein [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 241

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI------SCKALEIA 137
                L + +  D   +LDLG G GAV +AL K   PF K VGVD+      S  +LE  
Sbjct: 66  IWDKILAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADQSHNSLEET 125

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           K N     V++  + + +D       +  FD++ S      S     +    + F+   +
Sbjct: 126 KRNLEIAKVADHTELVTADMAKLPFEDDRFDLVTS------SFAFHNIKPNKKRFE---A 176

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L                  R L   G   +
Sbjct: 177 L--------------SEAHRVLKPGGKLII 192


>gi|226361768|ref|YP_002779546.1| hypothetical protein ROP_23540 [Rhodococcus opacus B4]
 gi|226240253|dbj|BAH50601.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 76

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL  G+G + +   ++    +   VD+S +A+  A  N   +  S R   ++ D    
Sbjct: 1   MLDLCAGSGILSVCAAEQ--GARVTAVDVSRRAVATAWMNTRPHRRSARV--VRGDLTEP 56

Query: 161 VEG-LFDVIVSNPPYIE 176
           V G  FD++VSNPP   
Sbjct: 57  VRGERFDLVVSNPPLRP 73


>gi|14590534|ref|NP_142602.1| hypothetical protein PH0644 [Pyrococcus horikoshii OT3]
 gi|3257052|dbj|BAA29735.1| 364aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 364

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 66/204 (32%), Gaps = 30/204 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETE-----LLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           ++    F  +  T    +   RP         L  S     +   E  D    +D   G+
Sbjct: 169 LINEAFFLGID-TTGDHSLHRRPWRVYDHPAHLKASIANALIELAEVEDGASFIDPFCGS 227

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFD 166
           G + + L       + + ++   K L  AK NA+  GV ++ + ++ D    S      D
Sbjct: 228 GTIPIELALRGYQGRIICLEKFAKHLNGAKMNALAAGVFDKIEFIKGDARRLSKYVDEVD 287

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
             VSN PY   +    +                    S Y    D +S+ L K G+    
Sbjct: 288 FAVSNLPYGLKIGRKSMIP------------------SLYERFFDELSKVLQKRGVFI-- 327

Query: 227 IGYNQKVDVVRIFESRKLFLVNAF 250
               +K  + +  E     + +  
Sbjct: 328 --TTEKEAIEKAIEEVGFKITHYR 349


>gi|294678728|ref|YP_003579343.1| ribosomal protein L11 methyltransferase [Rhodobacter capsulatus SB
           1003]
 gi|294477548|gb|ADE86936.1| ribosomal protein L11 methyltransferase [Rhodobacter capsulatus SB
           1003]
          Length = 289

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 33/150 (22%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+G GT  + +A  K  P    +  DI   A+E A +N   N ++ R   LQ+  F+  
Sbjct: 153 VDIGCGTAVLAMAAAKLWPE-TVLASDIDPVAVETAAANVTGNDLAGRVICLQAAGFAHP 211

Query: 162 E----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +      FD+I +N           L   +    P +       GL              
Sbjct: 212 DLQAAAPFDLIFAN----------ILKGPLIALAPDMGRFCAESGLVIL----------- 250

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESRKLFLV 247
              G+       +Q  +V+  ++++   LV
Sbjct: 251 --SGILI-----DQGDEVIAAYQAQGFRLV 273


>gi|289164839|ref|YP_003454977.1| hypothetical protein LLO_1505 [Legionella longbeachae NSW150]
 gi|288858012|emb|CBJ11872.1| hypothetical protein LLO_1505 [Legionella longbeachae NSW150]
          Length = 219

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGV 127
            D +    ++  L     A  L        +R+LDL  G G + + L    P   +   +
Sbjct: 20  PDEYHFSLDSIYLARFV-ATQLQSHTDLGSLRVLDLCAGCGVIGMELSWHLPAIRQIDFI 78

Query: 128 DISCKALEIA---KSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESV 178
           +I     E     ++N     +  R+  L  D       EG FD+ +SNPPY ++ 
Sbjct: 79  EIQDIYTEYFYQNQANISRPELQFRWHLLNYDALHEKKWEGKFDMTISNPPYFQAG 134


>gi|227114582|ref|ZP_03828238.1| cyclopropane-fatty-acyl-phospholipid synthase [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 406

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 8/144 (5%)

Query: 33  RQRFFLTNAIVRSLKHESI--HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-L 86
            +    T    R    E+I  H  LG   +  F +  L  SS  F    +   L   A +
Sbjct: 119 ERLRHWTRRNHRQQARENIAAHYDLGNEFYAHFLDEELLYSSALFTADEQDLTLAQRAKM 178

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++       +L++GTG GA+     +     +     +S +  + AK+     G+
Sbjct: 179 ARLCEQLTLTASDHLLEIGTGWGAMAEFAARHY-GCRVTTTTLSQEQYDWAKARIARAGL 237

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
            +R   L  D +  + G FD +VS
Sbjct: 238 QDRVQVLLCD-YRDLTGEFDKLVS 260


>gi|157953703|ref|YP_001498594.1| hypothetical protein AR158_C513L [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068351|gb|ABU44058.1| hypothetical protein AR158_C513L [Paramecium bursaria Chlorella
           virus AR158]
          Length = 369

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 64/161 (39%), Gaps = 24/161 (14%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +L+   G+G   +      P     GV++     +++K N     +  +      D
Sbjct: 42  NPQSVLEPSCGSGEFLIDCETRFPDANITGVELDVTLAQVSKENTTRTIIHTQ------D 95

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + + V G FD+I+ NPP+++   V+           + +  G  +   +   +   +++H
Sbjct: 96  FLTFVGGKFDLIIGNPPFVQMKAVN-----------KQASTGRSN--LYIEILFKCMTQH 142

Query: 217 LNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLVNAFKD 252
           LN +G+ ++      +  +       +  S+K+      +D
Sbjct: 143 LNDNGVLAMVLPSTIMNGHFSRPTRELILSKKIIHFETIRD 183


>gi|242237730|ref|YP_002985911.1| methyltransferase type 11 [Dickeya dadantii Ech703]
 gi|242129787|gb|ACS84089.1| Methyltransferase type 11 [Dickeya dadantii Ech703]
          Length = 258

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            LA  L +  ++ V+R+LD+GTG G   + L       +   VD++   L+ A++NA   
Sbjct: 43  WLAKILEQAPQKPVLRVLDIGTGPGFFAVTLALA--GHRVTAVDVTQAMLDQARANAAHY 100

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVS 170
             +  F           +  FD++VS
Sbjct: 101 RTTIDFVHSDVHALPFADNGFDLVVS 126


>gi|240170754|ref|ZP_04749413.1| hypothetical protein MkanA1_15682 [Mycobacterium kansasii ATCC
           12478]
          Length = 239

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P  +T+   ++ +A+        +   +LD+G G G   + L +     +   +DIS  A
Sbjct: 51  PPWDTKAPKENVIAWQTGGWVHGE---VLDIGCGFGDNAIYLAQH--GHRVTAMDISPTA 105

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           L  A+  A   GV  RF    +         FD ++
Sbjct: 106 LITAERRAADAGVDVRFAAADATTLDGYTDRFDTVI 141


>gi|227523212|ref|ZP_03953261.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
           8290]
 gi|227089599|gb|EEI24911.1| methyltransferase family protein [Lactobacillus hilgardii ATCC
           8290]
          Length = 241

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 55/150 (36%), Gaps = 32/150 (21%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI------SCKALEIA 137
                L + +  D   +LDLG G GAV +AL K   PF K VGVD+      S  +LE  
Sbjct: 66  IWDKILAKTDISDDATVLDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADKSHNSLEET 125

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           K N     V++  + + +D       +  FD++ S      S     +    + F+   +
Sbjct: 126 KRNLEIAKVADHTELVTADMAKLPFEDDRFDLVTS------SFAFHNIKPNKKRFE---A 176

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L                  R L   G   +
Sbjct: 177 L--------------SEAHRVLKPGGKLII 192


>gi|143581977|sp|Q0HL77|RUMA_SHESM RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
          Length = 449

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +A +L  +  +   RILDL  G G   L L K     + +GV+     +  A+ NA  
Sbjct: 290 AMVAQALDWLAPQPGERILDLFCGMGNFSLPLAKL--GAEVIGVEGVPDMVSQARENAAA 347

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG+S        D  + +        S  P++  +    L           +  G  + L
Sbjct: 348 NGLS-NLTFYHGDLSADL--------SCEPWMGKIDKLLLDP---------ARAGAFESL 389

Query: 204 SHYRTI-------ADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFES 241
              + +              L +D    +E GY  QK+ ++ +F  
Sbjct: 390 QWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQ 435


>gi|300864070|ref|ZP_07108970.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300337949|emb|CBN54116.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 296

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 32/170 (18%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P +E +V   L  ++  + +    RILDLG GTG+  L L +  P  + +G+D+S   + 
Sbjct: 83  PPSEAIVRQGLIDAVMGVPR----RILDLGCGTGSTTLMLKQAFPQAEVIGMDLSPYMIL 138

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A+  A   G++ ++    ++        FD++ +      S++       V        
Sbjct: 139 VAEMKAQKAGLNIQWRHGNAEQTGFPNASFDLVTA------SLLFHETPPTVS------- 185

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFES 241
                      + I     R L   G   V  G      Q   +  +FE 
Sbjct: 186 -----------QNILRESFRLLTVGGQVIVLDGNQKTLRQTEWLTDVFEE 224


>gi|189219100|ref|YP_001939741.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
 gi|189185958|gb|ACD83143.1| SAM-dependent methyltransferase [Methylacidiphilum infernorum V4]
          Length = 219

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
             + LVD       P  ++     +LD+G GT  + +   ++ P  K +GVD S   L +
Sbjct: 27  PHQALVDR-FERLFPHFKEG---LVLDMGCGTADIAIRFARKYPRAKIIGVDGSPAMLAL 82

Query: 137 AKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSN 171
           A+     N +    + ++    + +    FDV++SN
Sbjct: 83  AQQRIEENHLLASIELIKGRLPYWNYPRSFDVLISN 118


>gi|134300545|ref|YP_001114041.1| precorrin-6y C5,15-methyltransferase subunit CbiT [Desulfotomaculum
           reducens MI-1]
 gi|134053245|gb|ABO51216.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Desulfotomaculum reducens MI-1]
          Length = 202

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 37/167 (22%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           ++ +++      + D+G G+G+V +    +        ++    A E+ ++NA   G++ 
Sbjct: 35  AIGKMKLFPGAVVYDVGAGSGSVTVECALQIKNGTVYALEKDSSADELVEANARRFGLT- 93

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               +                   P      ++ L    R F       GG  G      
Sbjct: 94  NVRLV-------------------PGFAPDTMEKLPPADRIF------IGGSAG--ALSE 126

Query: 209 IADGVSRHLNKDGLCS-----VEIGYNQKVDVVRIFESRKLFLVNAF 250
           I +     L  DG        +E G      V++  E +    + A 
Sbjct: 127 ILETSHHKLKPDGWLVASAITLETG----PRVLQFLEDKGYQQIEAV 169


>gi|77411948|ref|ZP_00788278.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           CJB111]
 gi|77161974|gb|EAO72955.1| ribosomal protein L11 methyltransferase [Streptococcus agalactiae
           CJB111]
          Length = 317

 Score = 58.6 bits (141), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 46/154 (29%), Gaps = 35/154 (22%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  +E      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKDIYAYDLDDVAVRVAQENIDMNPATENIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D         DVIV+N                      ++             + D   
Sbjct: 228 GDLLKGAHQEADVIVAN---------------------ILA--------DILIHLTDDAY 258

Query: 215 RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
           R +  +G   +   I       V    E    FL
Sbjct: 259 RLVKDEGYLIMSGIISEKW-DMVRESAEKAGFFL 291


>gi|332877669|ref|ZP_08445412.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684418|gb|EGJ57272.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 244

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 54/141 (38%), Gaps = 29/141 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            F + ++ +     +LD+ TGTG + +AL  E    K  G+DIS   L + +       +
Sbjct: 48  KFVVQKVAEIHPTAVLDVATGTGDLAIAL-TEIKGLKITGLDISEGMLSVGREKVAKRNL 106

Query: 147 SERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++R   +Q D       +  FD +              +G  VR+F+          GLS
Sbjct: 107 ADRITLVQGDSEQLPFADETFDAV-------------TVGFGVRNFEDL------EKGLS 147

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
             R +       L  +G   V
Sbjct: 148 EIRRV-------LKPNGRLVV 161


>gi|325921244|ref|ZP_08183104.1| 16S rRNA m(2)G 1207 methyltransferase [Xanthomonas gardneri ATCC
           19865]
 gi|325548211|gb|EGD19205.1| 16S rRNA m(2)G 1207 methyltransferase [Xanthomonas gardneri ATCC
           19865]
          Length = 355

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 49/165 (29%), Gaps = 27/165 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDLYEAEARALTLAQRNLQGIAHPAQLQYHWHDVTAGLVAQYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D                         +      ++ L   G   +
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLLL 314


>gi|261210717|ref|ZP_05925009.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC341]
 gi|260840202|gb|EEX66782.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC341]
          Length = 413

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     K     IS +    AK      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCKVTTTTISEEQFAYAKQQITALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   L+ D +  +EG +D +VS
Sbjct: 244 LSEQITLLKQD-YRLLEGQYDKLVS 267


>gi|166713554|ref|ZP_02244761.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas oryzae
           pv. oryzicola BLS256]
          Length = 355

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 61/200 (30%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDI---SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+     +AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDLYEAQARALTLARRNLQDITHPAQLHYHWRDVTAGLVAHYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLLLVANRHLPYEQVLNES 329

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L++A +
Sbjct: 330 FGQVRVAAERDGFKLISAIR 349


>gi|307329339|ref|ZP_07608502.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           violaceusniger Tu 4113]
 gi|306885007|gb|EFN16030.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           violaceusniger Tu 4113]
          Length = 437

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 75/208 (36%), Gaps = 37/208 (17%)

Query: 26  PDSVLDDRQRFFLTNA--IVRSLKHESIHRILGWRDFYNVRL---TLSSDTFEPRPETEL 80
           P +   +  R        + R  K  S H  +G  DFY + L    + S  +   P++ L
Sbjct: 127 PPTPPREEARTGFAPLHSLRRDKKAISHHYDVGN-DFYELVLGPSMVYSCAYWDTPDSAL 185

Query: 81  LVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
             + A    L     ++  R   R+LD+G G G++ L   +E    + VGV +S +    
Sbjct: 186 --EDAQRAKLDLVCRKLALRPGQRLLDVGCGWGSMVLHAAREY-GVRAVGVTLSEEQAAY 242

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+      G++++ +    D+    +G +D I S       + +      VR  +     
Sbjct: 243 ARKRIADAGLTDQVEIRVQDYREVPDGPYDAISS-------IGMAEHVGSVRYAE----- 290

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                    Y  I     R L   G   
Sbjct: 291 ---------YTAIL---HRLLRPGGRLL 306


>gi|119631658|gb|EAX11253.1| methyltransferase like 5, isoform CRA_b [Homo sapiens]
          Length = 198

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|119631657|gb|EAX11252.1| methyltransferase like 5, isoform CRA_a [Homo sapiens]
          Length = 211

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|92859575|ref|NP_054887.2| methyltransferase-like protein 5 [Homo sapiens]
 gi|332814806|ref|XP_003309373.1| PREDICTED: methyltransferase-like protein 5-like isoform 1 [Pan
           troglodytes]
 gi|332814808|ref|XP_003309374.1| PREDICTED: methyltransferase-like protein 5-like isoform 2 [Pan
           troglodytes]
 gi|74761664|sp|Q9NRN9|METL5_HUMAN RecName: Full=Methyltransferase-like protein 5
 gi|9295180|gb|AAF86874.1|AF201938_1 DC3 [Homo sapiens]
 gi|12654205|gb|AAH00921.1| Methyltransferase like 5 [Homo sapiens]
 gi|62205251|gb|AAH93014.1| METTL5 protein [Homo sapiens]
 gi|62822320|gb|AAY14869.1| unknown [Homo sapiens]
 gi|119631659|gb|EAX11254.1| methyltransferase like 5, isoform CRA_c [Homo sapiens]
 gi|119631660|gb|EAX11255.1| methyltransferase like 5, isoform CRA_c [Homo sapiens]
 gi|307686343|dbj|BAJ21102.1| methyltransferase like 5 [synthetic construct]
          Length = 209

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|7022504|dbj|BAA91622.1| unnamed protein product [Homo sapiens]
          Length = 209

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|240102669|ref|YP_002958978.1| SAM-dependent methyltransferase, putative [Thermococcus
           gammatolerans EJ3]
 gi|239910223|gb|ACS33114.1| SAM-dependent methyltransferase, putative [Thermococcus
           gammatolerans EJ3]
          Length = 455

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 36/195 (18%)

Query: 44  RSLKHES-IHRIL-GWRDFYNV------RLTLSSDTFEPRPETELLVDSALAFSLPRIEK 95
           R  +    I R+L G   +  +      +  +         +T   +D            
Sbjct: 216 RRREGLPEIERVLLGKEKYRTIIEEGKAKFIVDMR----GQKTGFFLDQRENRIALEKYV 271

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +R+LD+ T TG   +         + V VD S  A+ + K NA  NGV +R   +  
Sbjct: 272 KPGMRVLDVFTYTGGFAIHAAVAGAD-EVVAVDKSPWAINMVKENAKLNGVEDRMRYITG 330

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
             F  +E        FD+++ +PP       D                    GL  Y  +
Sbjct: 331 SAFPVMEEMIKKGEKFDIVILDPPAFVQHEKDL-----------------KRGLRAYFNV 373

Query: 210 ADGVSRHLNKDGLCS 224
                + + + G+  
Sbjct: 374 NHAGLKLVKEGGILV 388


>gi|254225515|ref|ZP_04919125.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V51]
 gi|125621985|gb|EAZ50309.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio cholerae V51]
          Length = 219

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +L++GTG GA+ + + +     K     IS +    A+      G++ +   L+ 
Sbjct: 1   EPTDHVLEIGTGWGAMAIYMAQHY-GCKVTTTTISEEQYAYAQQKITALGLNNQITLLKQ 59

Query: 156 DWFSSVEGLFDVIVS 170
           D +  + G +D +VS
Sbjct: 60  D-YRLLSGQYDKLVS 73


>gi|332531769|ref|ZP_08407654.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038745|gb|EGI75187.1| ribosomal protein L11 methyltransferase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 293

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 87/239 (36%), Gaps = 61/239 (25%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHE------SIHRILGWRDFYNVRLTLSSDTF-EPR 75
           ++     L D   + +     +  + E       I         +  +L +       P 
Sbjct: 72  LLKRHDELKDNLVYKIEQLEDKDWEREWMDNFHPIQ--------FGEKLWICPSWRDIPD 123

Query: 76  PE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFF 122
           P+   +L+D  LAF           L  +E +D+    ++D G G+G + +A +K     
Sbjct: 124 PDAVNVLLDPGLAFGTGTHATTALCLKWLESQDLTGKTVVDFGCGSGILGIAAIKLGAE- 182

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
           + +G+DI  +ALE +  NA  NGV+++ +    +  +  E   D++V+N   I +  +  
Sbjct: 183 RMIGIDIDPQALEASLDNANRNGVADKLEVYLPE--NQPEFSADIVVAN---ILAQPLRE 237

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFE 240
           L   +              GL             L   G  ++  I   Q   V  I+ 
Sbjct: 238 LHSVIL-------------GL-------------LKPGGKIAMSGILEEQAQSVADIYA 270


>gi|302541520|ref|ZP_07293862.1| probable methyltransferase [Streptomyces hygroscopicus ATCC 53653]
 gi|302459138|gb|EFL22231.1| probable methyltransferase [Streptomyces himastatinicus ATCC 53653]
          Length = 351

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 11/114 (9%)

Query: 68  SSDTFEPRPETELLV-----DSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKESP 120
             D F P  E    V     D A A+   R       V R+LD+G+G G +   L +  P
Sbjct: 70  DWDAFAPMLEQGAEVHTPVYDQATAWLRERFAASGGSVRRVLDVGSGPGVLTCLLARAFP 129

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVS 170
             + V VD +   LE A+  A   G+  R  T+ ++    ++    G  D++ S
Sbjct: 130 EAEVVAVDGTPALLERARERAARLGLDGRVTTVHAELPEGLDPAVIGTADLVWS 183


>gi|315655506|ref|ZP_07908405.1| methyltransferase (methylase) [Mobiluncus curtisii ATCC 51333]
 gi|315490161|gb|EFU79787.1| methyltransferase (methylase) [Mobiluncus curtisii ATCC 51333]
          Length = 186

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 34/170 (20%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL +      P  E    V  A+   L          +LDL  G+GA+ L        
Sbjct: 11  GLRLNVPKSGTRPTSER---VREAMFSHLLCSGFPQGATVLDLFAGSGALGLE-ALSRGG 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIE 176
              V VD +  A ++ ++N       +R   L  D    V        FD+I  +PPY  
Sbjct: 67  ASAVFVDAAGSAAKVLRANIDALRYRDRVRVLVKDAAKFVSELKPPDCFDLIFLDPPY-- 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                 L   V                     I  G++ HL+ +G+  +E
Sbjct: 125 -----ALAPYVLC------------------EILAGLTAHLSPEGIMVLE 151


>gi|54027294|ref|YP_121536.1| hypothetical protein nfa53200 [Nocardia farcinica IFM 10152]
 gi|54018802|dbj|BAD60172.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 208

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 39/170 (22%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W DFY             R    +      A     +E +     LDLG G GA  + L 
Sbjct: 10  WEDFY-------------RERDAVWSGKVNALFAREVEHQTPGTALDLGCGEGADAIWLA 56

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYI 175
           +    ++   VDIS  ALE A ++AV  GV  R    + +   S   G FD++ +     
Sbjct: 57  ER--GWQVTAVDISTVALERAAAHAVEAGVDHRITFARHNLLESFPAGSFDLVAAQ---- 110

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                           P  +  G  DG      I    +  +   GL  V
Sbjct: 111 ------------FLHSPVAAP-GERDG------ILTRAAAAVAPGGLLVV 141


>gi|302850509|ref|XP_002956781.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f.
           nagariensis]
 gi|300257841|gb|EFJ42084.1| hypothetical protein VOLCADRAFT_97821 [Volvox carteri f.
           nagariensis]
          Length = 322

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 12/126 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G   L + K  P  K   VD+  + LE A + A    +  + D + +D   
Sbjct: 147 RVLDAGCGIGDNALYVAKACPGAKVTAVDVVPRCLEFAAAKANLRNMRNQLDLVVADLLE 206

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +  G        PP +         + +         D   D           + R L  
Sbjct: 207 NDSGCL------PPALGPNSTGSFDVVLDSSTFHCFSDAHRD------RYVSTLRRLLRP 254

Query: 220 DGLCSV 225
            GL  +
Sbjct: 255 GGLIYM 260


>gi|226952638|ref|ZP_03823102.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter sp. ATCC 27244]
 gi|226836627|gb|EEH69010.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [Acinetobacter sp. ATCC 27244]
          Length = 300

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      + F  
Sbjct: 163 VIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLFVGLPEEFDQ 221

Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
                  DV+V+N   I +  +  L  E   +   +   +L G
Sbjct: 222 EFNSQQADVLVAN---ILAGPLMALAPEFSTLIKNEGEFALAG 261


>gi|158530289|gb|ABW71850.1| putative aromatic C-methyltransferase [Streptomyces refuineus
           subsp. thermotolerans]
          Length = 347

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 26/138 (18%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +++ RDV  +LD+G G     +AL +  P  +    D+   A E+A+ N    G+ +
Sbjct: 164 LLHQVDYRDVRDLLDVGGGDAVNAIALARAHPHLRVTVFDL-EGAAEVARDNIADAGLGD 222

Query: 149 RFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   +  D F   +   FD+++                +   + P  +           R
Sbjct: 223 RIRVVAGDMFGDPLPDGFDLVLF-------------AHQFVIWSPEQN-----------R 258

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G  +V
Sbjct: 259 ALLKRAYEALRPGGRVAV 276


>gi|332163157|ref|YP_004299734.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318603959|emb|CBY25457.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325667387|gb|ADZ44031.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330862842|emb|CBX72983.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           W22703]
          Length = 293

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 32/146 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156
              ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +  L  D
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD 217

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    DV+V+N           L   +R+  P IS             +      H
Sbjct: 218 QPADLSA--DVVVAN----------ILAGPLRELAPLIS-------------VLPVAGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +      Q   V + +E +
Sbjct: 253 LGLSGVLA-----TQAAGVAQAYEDK 273


>gi|294084224|ref|YP_003550982.1| cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292663797|gb|ADE38898.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 420

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 23/167 (13%)

Query: 19  SHQVIVDPDS---VLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR 75
            H +          + +R  F   + +VR+ K    H        Y+++ TL     +PR
Sbjct: 89  RHWLTHWAGRTSLAISNRLAFLRHHNLVRASKRNVAHH-------YDLKDTLFDSFLDPR 141

Query: 76  --------PETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
                    ++   ++ A    LA    ++  +    ILD+G G G +  AL+   P   
Sbjct: 142 RQYSCAYSDDSTTTIEQAQINKLARIAAKLNIQPHDTILDIGCGWGGLAHALIDCVPETH 201

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G+ +S + L+ A      +G  ++ D    D +    G FD IVS
Sbjct: 202 VTGITLSERQLDFATQQRDQSGRQQQLDFHLRD-YRHQTGKFDRIVS 247


>gi|212711053|ref|ZP_03319181.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM
           30120]
 gi|212686221|gb|EEB45749.1| hypothetical protein PROVALCAL_02122 [Providencia alcalifaciens DSM
           30120]
          Length = 306

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 56/145 (38%), Gaps = 30/145 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +      +G+DI  +A+  ++ NA  NGVSER       
Sbjct: 170 EGKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAILASRDNAERNGVSERLSLYLPK 228

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                +   DV+V+N           L   +R+  P IS             +   V  H
Sbjct: 229 -DQPQDLQADVVVAN----------ILAGPLRELAPMIS-------------VLPRVGGH 264

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFES 241
           L   G+ +     +Q   V   + +
Sbjct: 265 LGLSGVLA-----SQAESVADAYRA 284


>gi|255626525|gb|ACU13607.1| unknown [Glycine max]
          Length = 169

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +    E      + D G G G + +A    S     +G+DI  ++LEIA +NA   
Sbjct: 36  MLFTAENSFEDVSDKVVADFGCGCGTLGVAAALLSAE-HVLGIDIDPESLEIASNNAEEL 94

Query: 145 GVSERFDTLQSDWFS-SVEGL-FDVIVSNPPYIESVIVDCLG 184
            V    D +QS+       G   D ++ NPP+        L 
Sbjct: 95  EVD--IDFIQSNVMDLGWRGRIVDTVIMNPPFGTRKKGADLD 134


>gi|146311031|ref|YP_001176105.1| 23S rRNA methyluridine methyltransferase [Enterobacter sp. 638]
 gi|167012639|sp|A4W8M4|RUMB_ENT38 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|145317907|gb|ABP60054.1| 23S rRNA m(5)U-747 methyltransferase [Enterobacter sp. 638]
          Length = 375

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   +   ++  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPHSFFQTNPT--VASQLYATARDWVRALNIHHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIV 169
            L     +P     G++IS +A+  AK +A   G+++  F  L S  F++ +G   ++++
Sbjct: 248 GLHCA--TPQMTLTGIEISPEAIACAKQSAAQLGLTDLHFQALDSAEFATGQGRVPELVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|219850426|ref|YP_002464859.1| putative RNA methylase [Chloroflexus aggregans DSM 9485]
 gi|219544685|gb|ACL26423.1| putative RNA methylase [Chloroflexus aggregans DSM 9485]
          Length = 352

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 30/217 (13%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-----EKRDVVRILDLGTGTGAVC 112
           R  +++ + L+      RP      + AL   +              R+L++G G+G + 
Sbjct: 153 RSGWDLLVRLTPRPLATRPWRVCNREGALNGPVAHAMALLSRPHPTDRVLNIGCGSGTLL 212

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVS 170
           +  L   P  + +G D    AL  A  N    G+         D           DVI++
Sbjct: 213 IERLLIGPAVQALGCDTDPAALACAYRNVAAAGLGRNVLLYDWDAQALPLPTASMDVILA 272

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           + P+   V                        LS Y  +    +R     G   +    +
Sbjct: 273 DLPFGHLVGSHTTN------------------LSLYPALLREAARVTRASGRAVLI--SH 312

Query: 231 QKVDVVRIFESRKLFLVN--AFKDYGGN-DRVLLFCR 264
           +   + R      ++        D GG   R+ +  R
Sbjct: 313 EVRLMERTLAELPVWHCEQQLRVDLGGLYPRIFVLRR 349


>gi|313905584|ref|ZP_07838946.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
 gi|313469531|gb|EFR64871.1| Methyltransferase type 11 [Eubacterium cellulosolvens 6]
          Length = 570

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 15/129 (11%)

Query: 54  ILGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           IL  RD++      ++  ++  +F          +     +   +   D   + DL +GT
Sbjct: 353 ILAGRDYFYEELLGLKFKITPFSFFQTNSKG--AEVLYRTAREFLGDIDNQTVFDLYSGT 410

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGL 164
           G +   L    P  K  VGV+I  +A+E AK NA  NG+ +    +  D       +   
Sbjct: 411 GTIAQMLA---PVAKNVVGVEIVEEAVEAAKENAALNGL-DNCRFIAGDVLKVLDELTEK 466

Query: 165 FDVIVSNPP 173
            D IV +PP
Sbjct: 467 PDTIVLDPP 475


>gi|294635661|ref|ZP_06714135.1| methyltransferase [Edwardsiella tarda ATCC 23685]
 gi|291090991|gb|EFE23552.1| methyltransferase [Edwardsiella tarda ATCC 23685]
          Length = 396

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 25/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDW 157
             +L+  + TGA  ++        +   VD S  AL+IA+ N   NG+   R + L+ D 
Sbjct: 221 AHVLNCFSYTGAFAIS-ALMGGCAQVTSVDTSQAALDIARQNVELNGLDLARAEFLRDDV 279

Query: 158 FSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F  +         FD+IV +PP              +  + +  L G   G   Y+ I  
Sbjct: 280 FQLLRRYRDEGKTFDLIVMDPP--------------KFVENKSQLAGACRG---YKDINM 322

Query: 212 GVSRHLNKDGLCS 224
              + L   G+  
Sbjct: 323 LALQLLRPGGVLL 335


>gi|269966803|ref|ZP_06180876.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B]
 gi|269828470|gb|EEZ82731.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus 40B]
          Length = 295

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +               
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADKLEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R +A  +   +  +G  ++ 
Sbjct: 214 -------YLPQNQPEGLVADVVVANIL----AGP-----LRELAPIIKGLVKPNGDLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            +   Q  DV   +  
Sbjct: 258 GVLDTQAEDVANYYRD 273


>gi|190347713|gb|EDK40042.2| hypothetical protein PGUG_04140 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 256

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 51/157 (32%), Gaps = 23/157 (14%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCL 113
           W+  Y++        +        +   ALA  + R+ K    +  +ILD+  G G   +
Sbjct: 27  WKKRYDLFSRFDEGVYMTSELWYSVTPEALAIFIARLVKELLPNARKILDVCCGGGGNAI 86

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-------------- 159
                 P      VDIS   L+    NA   GV +R  T   DW                
Sbjct: 87  QFAHYFP--SVGAVDISPNNLQCTVHNAGIYGVLDRIWTQLGDWNELQNKTDWIPYGIRM 144

Query: 160 ----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
               S   +FD +  +PP+           ++    P
Sbjct: 145 KNKKSKNEMFDFVFCSPPWGGPSYKKSGQFDLEQMKP 181


>gi|121714943|ref|XP_001275081.1| methyltransferase, putative [Aspergillus clavatus NRRL 1]
 gi|119403237|gb|EAW13655.1| methyltransferase, putative [Aspergillus clavatus NRRL 1]
          Length = 358

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 44/140 (31%), Gaps = 37/140 (26%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     +   R+LD+GTGTG   +    E P  + +G D+S             + 
Sbjct: 113 LKGELHAAPIKTPRRVLDIGTGTGIWAIDFADEHPESEVIGNDLSP---------IQPSW 163

Query: 146 V--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  + RF+    +   S    FD       YI       L   +RD D            
Sbjct: 164 IPPNCRFEIDDFELPWSYSQPFD-------YIHGRE---LEGAIRDHD------------ 201

Query: 204 SHYRTIADGVSRHLNKDGLC 223
               T+      +L   G  
Sbjct: 202 ----TLFRQAFENLRPGGWL 217


>gi|307946011|ref|ZP_07661346.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp.
           TrichSKD4]
 gi|307769675|gb|EFO28901.1| ribosomal RNA small subunit methyltransferase C [Roseibium sp.
           TrichSKD4]
          Length = 351

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 36/191 (18%)

Query: 75  RPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           RP       +D A    +  +      R  DLG G G +   LL+++P  K   +D+   
Sbjct: 175 RPGIFAWDRIDPASRLLIDHLPATLSGRGADLGAGFGVLSRHLLEKAP--KVTALDLYEA 232

Query: 133 ---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
              AL++A+ N  ++        + SD    +EG +D IV NPP+ ++            
Sbjct: 233 EKRALDLAQENLASDRDKVTLTGIWSDVTKGIEGPYDFIVMNPPFHQT------------ 280

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--------EIGYNQKVDVVRIFES 241
                   G  D     +         L   G+  +        E   N+      +   
Sbjct: 281 --------GKADRTDVGQGFIKAAFGGLRSGGVLYLVANRHLPYEHTLNELFARTEMLAD 332

Query: 242 R-KLFLVNAFK 251
                ++ A K
Sbjct: 333 EVGYKVIRAIK 343


>gi|238751412|ref|ZP_04612905.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC
           43380]
 gi|238710470|gb|EEQ02695.1| Ribosomal protein L11 methyltransferase [Yersinia rohdei ATCC
           43380]
          Length = 293

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   S  
Sbjct: 159 GKTIIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLSK- 216

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 217 DQPADLSADVVVAN 230


>gi|254444480|ref|ZP_05057956.1| Conserved hypothetical protein 95 [Verrucomicrobiae bacterium
           DG1235]
 gi|198258788|gb|EDY83096.1| Conserved hypothetical protein 95 [Verrucomicrobiae bacterium
           DG1235]
          Length = 413

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+   TG   L+ +      +   VD+  KA+  AK NA  NG   R +    D FS 
Sbjct: 242 VLDVCCYTGGFALSAMVSGGASEVTAVDLDEKAIAQAKRNANLNG-QARVNWTHCDAFSF 300

Query: 161 VE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +         +D++  +PP +                         +G+  Y  +    S
Sbjct: 301 MRQMQRNGKRWDLVNLDPPKLIFSKDQE-----------------AEGMKKYEDLNQLAS 343

Query: 215 RHLNKDGLCS 224
             +   G+ +
Sbjct: 344 TLVKPGGIFA 353


>gi|170047169|ref|XP_001851106.1| methyltransferase [Culex quinquefasciatus]
 gi|167869669|gb|EDS33052.1| methyltransferase [Culex quinquefasciatus]
          Length = 215

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            AL          +   +LDLG G G + +           VG++I   A+++ + N   
Sbjct: 38  HALYTIETNYGDLENKLVLDLGCGPGMLSIGAALLGAQ-HVVGIEIDLDAIKVFQENVQG 96

Query: 144 NGVSERFDTLQSDWFSSVEG-----LFDVIVSNPPY 174
             + E  D +Q D   +++G      FD ++ NPP+
Sbjct: 97  FEL-ENVDCVQWDVL-NLDGLYDILKFDTVLMNPPF 130


>gi|152984637|ref|YP_001350593.1| hypothetical protein PSPA7_5261 [Pseudomonas aeruginosa PA7]
 gi|229564348|sp|A6VC08|RLMG_PSEA7 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|150959795|gb|ABR81820.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 374

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVS 147
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N     G  
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELTLVDESYMAVQSARENWRAALGER 282

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                          G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PAAFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|320527464|ref|ZP_08028645.1| Met-10+ like-protein [Solobacterium moorei F0204]
 gi|320132177|gb|EFW24726.1| Met-10+ like-protein [Solobacterium moorei F0204]
          Length = 401

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 35/227 (15%)

Query: 15  TGLSSH-QVIVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNVRLTLSSDTF 72
           TG+  H Q+I D    +       +     R  +K      +  ++ F+     +S  T 
Sbjct: 133 TGMEQHKQMIYDILLEIFKENSHVIQAIYERNDIKVREKEGLTSYKGFFYNPNHVSPQTI 192

Query: 73  EPRPETELLVD--------SALAFSLPRIEKRDVVR---ILDLGTGTGAVCLALLKESPF 121
                 +L VD          L     R+  R + R   +LD  + TG   L     +  
Sbjct: 193 INENGIQLQVDIENGQKTGYFLDQKSNRVLLRHIARDKRVLDCFSHTGGFALNAAYGNAK 252

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPPYIES 177
                VD+S  AL+    NA  N + ++   +Q+D F  +E L    FD+IV +PP    
Sbjct: 253 A-VTAVDVSNVALQQGYQNAKLNHLEDKIQFVQADVFDYLEQLKGNEFDIIVLDPPAFTK 311

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                            +  G       Y+ I       L   G   
Sbjct: 312 SRKTV----------NNAYYG-------YKNINMKAMNVLRNGGYLI 341


>gi|289522449|ref|ZP_06439303.1| UbiE/COQ5 methyltransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504285|gb|EFD25449.1| UbiE/COQ5 methyltransferase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 233

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 29/147 (19%)

Query: 80  LLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +LVD    A     ++    + ILD+G GTG + L L K     +  G+DIS   L  A+
Sbjct: 23  MLVDKIEKAVIYEFLKPESGMEILDIGCGTGNLSLELAKL--GARVTGIDISEAMLVKAR 80

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             A    +   F    ++     +  FD  VS                        +L+ 
Sbjct: 81  EKAARENLCINFCCADANDLPFEDETFDAAVS----------------------LSALEF 118

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
             D     +     + R L   G   +
Sbjct: 119 SSD----LKKTLSEIYRVLKPGGRMVI 141


>gi|217972494|ref|YP_002357245.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS223]
 gi|217497629|gb|ACK45822.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS223]
          Length = 428

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+   + G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVESEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISL 196
           +S++   L  D + ++ G +D +VS    IE+V  + L    +  +    P       ++
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS-IEMIEAVGHEYLPGFFKKLESLLKPHGRMLLQAI 295

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                    YR   D + R++   G        V     Q   VV       L      +
Sbjct: 296 TIADQRYDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLR 355


>gi|119193322|ref|XP_001247267.1| hypothetical protein CIMG_01038 [Coccidioides immitis RS]
          Length = 321

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 49/204 (24%)

Query: 71  TFEPRPETELLVD--------SALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120
            +EP  ++ LL+D          L+       K       ++++GTG+G V   +   S 
Sbjct: 15  IYEPAEDSYLLLDTLSSKTEAEWLSSKFSSQPKSQSTSPFVVEIGTGSGVVLAFVAANSK 74

Query: 121 FFKG--------VGVDISCKA-----LEIAKSNAVTNGVSER-----------FDTLQSD 156
              G        V V+I+  A     + IA       G                 T+  D
Sbjct: 75  HILGRSDILTLGVDVNINACAATAKTVHIALEEKRKPGHQNEGETRGELAPQIIATIAGD 134

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLG---LEVR-----DFDPRISL-----DGGIDG 202
             S +  G  D+++ NPPY+ +  +  L     E        F+    L      GG  G
Sbjct: 135 LCSPLRAGAVDILIFNPPYVPTPELPPLPSPDPETPGIGTSKFEQDSHLLSLSYAGGEYG 194

Query: 203 LSHYRTIADGVSRHLNKD-GLCSV 225
           +     +   + + LN   G+  +
Sbjct: 195 METTNRLLQDLPKVLNPHRGVAYI 218


>gi|46198605|ref|YP_004272.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27]
 gi|46196228|gb|AAS80645.1| ribosomal protein L11 methyltransferase [Thermus thermophilus HB27]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           ET  L   ALA  L     R   ++LDLGTG+G   LA+  E    K +GVDI    L  
Sbjct: 105 ETTRLALKALARHL-----RPGDKVLDLGTGSGV--LAIAAEKLGGKALGVDIDPMVLPQ 157

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSN 171
           A++NA  NGV  RF  L+    +++  G FD++V+N
Sbjct: 158 AEANAKRNGVRPRF--LEGSLEAALPFGPFDLLVAN 191


>gi|317485785|ref|ZP_07944650.1| ribosomal protein L11 methyltransferase [Bilophila wadsworthia
           3_1_6]
 gi|316922959|gb|EFV44180.1| ribosomal protein L11 methyltransferase [Bilophila wadsworthia
           3_1_6]
          Length = 283

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +L   A+   L     +   R  D+GTG+G + +A         G+G DI   A++ A
Sbjct: 131 TTVLCLEAITELLASGRLKAGQRFFDVGTGSGILGIACCLN--GLAGLGSDIDPVAVDNA 188

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             N V N V++ F  +     +     FD++V+N
Sbjct: 189 LENVVINKVADDFRIVPGSAEAGEGERFDLVVAN 222


>gi|312864016|ref|ZP_07724252.1| ribosomal protein L11 methyltransferase [Streptococcus vestibularis
           F0396]
 gi|322517606|ref|ZP_08070474.1| ribosomal protein L11 methyltransferase [Streptococcus vestibularis
           ATCC 49124]
 gi|311100429|gb|EFQ58636.1| ribosomal protein L11 methyltransferase [Streptococcus vestibularis
           F0396]
 gi|322123771|gb|EFX95349.1| ribosomal protein L11 methyltransferase [Streptococcus vestibularis
           ATCC 49124]
          Length = 317

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 33/153 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N   E       
Sbjct: 170 RGGETVIDVGTGSGVLSIA-SSLLGAKEIYAYDLDDVAVRVAQENIDMNPSMENIHVATG 228

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V    DVIV+N                      ++             + +   R
Sbjct: 229 DLLKGVTQESDVIVAN---------------------ILA--------DILIHLTEDAYR 259

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKLFL 246
            +  +G   +   I       V    E    FL
Sbjct: 260 LVKDEGYLIMSGIISEKW-DMVRTSAEKAGFFL 291


>gi|303252523|ref|ZP_07338686.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247272|ref|ZP_07529321.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307260746|ref|ZP_07542435.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302648491|gb|EFL78684.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306856245|gb|EFM88399.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306869585|gb|EFN01373.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 234

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ +        G+D++ + LE+
Sbjct: 28  PIHLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA--GATVTGIDMTTEPLEV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  NG+S        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|294649951|ref|ZP_06727343.1| ribosomal protein L11 methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292824180|gb|EFF82991.1| ribosomal protein L11 methyltransferase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 300

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      + F  
Sbjct: 163 VIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLFVGLPEEFDQ 221

Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
                  DV+V+N   I +  +  L  E   +   +   +L G
Sbjct: 222 EFNSQQADVLVAN---ILAGPLMALAPEFSTLIKNEGEFALAG 261


>gi|165975740|ref|YP_001651333.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165875841|gb|ABY68889.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 245

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ +        G+D++ + LE+
Sbjct: 39  PIHLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA--GATVTGIDMTTEPLEV 96

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  NG+S        +    +  +     FDVI                +E+ +  
Sbjct: 97  ARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 142

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 143 P--------DPLS----IIQSCKALLKPDGVLFF 164


>gi|163742245|ref|ZP_02149633.1| ribosomal protein L11 methyltransferase, putative [Phaeobacter
           gallaeciensis 2.10]
 gi|161384575|gb|EDQ08956.1| ribosomal protein L11 methyltransferase, putative [Phaeobacter
           gallaeciensis 2.10]
          Length = 290

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 69/199 (34%), Gaps = 58/199 (29%)

Query: 74  PRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF                    +     ++ D+G GT  + +A    
Sbjct: 110 PADRIPLLIEAAMAFGTGHHGTTLGCLKALDKLIEDGFVGEKVADIGCGTAVLAMA-AAR 168

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPY 174
               + +  DI   A+++A++N   N +  R   L++  F +        FD+I +N   
Sbjct: 169 VWDGQILASDIDQVAVDVAEANLKANDMEGRVHCLEAAGFDAPALAEAAPFDLIFAN--- 225

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-----EIGY 229
           I                P ++L             A  V+ HL  DG   +     E   
Sbjct: 226 ILKG-------------PLVAL-------------APDVAAHLRADGYAILSGLLNE--- 256

Query: 230 NQKVDVVRIFESRKLFLVN 248
            Q  +V  ++    + LV 
Sbjct: 257 -QADEVQGVYAQNGINLVQ 274


>gi|57505420|ref|ZP_00371348.1| cyclopropane fatty acid synthase (cfa) [Campylobacter upsaliensis
           RM3195]
 gi|57016245|gb|EAL53031.1| cyclopropane fatty acid synthase (cfa) [Campylobacter upsaliensis
           RM3195]
          Length = 387

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ +   ++LD+G G G + +   ++    K VGV IS +  + A+       
Sbjct: 150 IEHTLKKLDLKPNEKLLDIGCGWGWLSIMAAQKY-GVKVVGVTISEEQCKKAQERVRELK 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + +R +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDRVEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +       + L   G   +
Sbjct: 249 YFMK-----AKQVLKPGGSMLL 265


>gi|32033662|ref|ZP_00133973.1| COG2227: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol
           methylase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|126207773|ref|YP_001052998.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae L20]
 gi|307256313|ref|ZP_07538096.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|166234757|sp|A3MZ07|UBIG_ACTP2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|126096565|gb|ABN73393.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|306865139|gb|EFM97039.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 234

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ +        G+D++ + LE+
Sbjct: 28  PIHLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMARA--GATVTGIDMTTEPLEV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  NG+S        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEENGLSIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|284097326|ref|ZP_06385459.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3]
 gi|283831164|gb|EFC35141.1| methyltransferase [Candidatus Poribacteria sp. WGA-A3]
          Length = 217

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD A    +  +        LD+GTG   + + L +  P  +   +D+S + L+IAK + 
Sbjct: 27  VDRAFVDRIVAL-GASTGHFLDVGTGPAQIPILLAQRCPDIRITAIDLSEEMLKIAKRHV 85

Query: 142 VTNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171
              G+++R   + + +      +  FD ++SN
Sbjct: 86  ADAGLTDRITLELVDAKTLPYPDNTFDGLISN 117


>gi|157139816|ref|XP_001647592.1| hypothetical protein AaeL_AAEL015626 [Aedes aegypti]
 gi|108866182|gb|EAT32260.1| conserved hypothetical protein [Aedes aegypti]
          Length = 254

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 11/115 (9%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L++   +             ++LD+G GT  + +   K+      +G+DI   A+E +
Sbjct: 107 TYLMIQQMMDMDF------HGKKVLDMGCGTSVLAIY-AKKKGASDVLGIDIDEWAVENS 159

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           + NA  N    R +   +D     +  F++I++N     ++++  +   V   +P
Sbjct: 160 RENAERNNTPMRVELGTADNLG--QEKFEIILAN--INRNILISDIPRYVEVLEP 210


>gi|289434753|ref|YP_003464625.1| ribosomal protein L11 methyltransferase [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289170997|emb|CBH27539.1| ribosomal protein L11 methyltransferase [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 314

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 69/214 (32%), Gaps = 38/214 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                +++D+GTG+G + +A  K       +  D+   A+  A+ N   N         Q
Sbjct: 172 MQPGDQLIDVGTGSGVLSIASAKLGAKS-ILATDLDEVAIRAAEENIRLNKTDAIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG- 212
           ++    +     D++V+N   I + ++     +V       +L  G  G+     I    
Sbjct: 231 NNLLQDINQTNVDIVVAN---ILAEVILLFPEDVFA-----ALKPG--GIFIASGIIQDK 280

Query: 213 ---VSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
              V   L K G   +E    Q   V  I   R 
Sbjct: 281 VKVVEEALKKAG-LIIEKIEQQGDWV-AIISKRG 312


>gi|241761114|ref|ZP_04759203.1| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|241374733|gb|EER64194.1| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 325

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 59/178 (33%), Gaps = 38/178 (21%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +   ++   + D+GTGTG +  A        + +  DI   A+E+AK NAV N V   
Sbjct: 168 RMKKAGQNFHNVADIGTGTGLLAFAARHLWHSARVIASDIDPVAVEVAKENAVVNHVPLG 227

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               Q +   +       +    PY      D L   +           G         +
Sbjct: 228 MGCRQVEMVVAAGMDNRQLKRRAPY------DLLIANIL---------AGP--------L 264

Query: 210 ADGVSRH---LNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +        L K G   +  G    Q+  V R +++  + L          DRV+L 
Sbjct: 265 IELAPSFVPALQKGGSLIL-AGLVAEQEQAVCRAYKNLGMRLA---------DRVVLG 312


>gi|143582026|sp|Q0HXI0|RUMA_SHESR RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
          Length = 449

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +A +L  +  +   RILDL  G G   L L K     + +GV+   + +  A+ NA  
Sbjct: 290 AMVAQALDWLAPQPGERILDLFCGMGNFSLPLAKL--GAEVIGVEGVPEMVSQARENAAA 347

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG+S        D  + +        S  P++  +    L           +  G  + L
Sbjct: 348 NGLS-NLTFYHGDLSADL--------SCEPWMGKIDKLLLDP---------ARAGAFESL 389

Query: 204 SHYRTI-------ADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFES 241
              + +              L +D    +E GY  QK+ ++ +F  
Sbjct: 390 QWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQ 435


>gi|75676552|ref|YP_318973.1| ribosomal L11 methyltransferase [Nitrobacter winogradskyi Nb-255]
 gi|74421422|gb|ABA05621.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Nitrobacter winogradskyi Nb-255]
          Length = 321

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 40/176 (22%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       R+LDLG GTG + +A  K       +  DI  ++  +A+ 
Sbjct: 169 LLLDHVLRARMPR-------RVLDLGAGTGVLAIAAAKAL-HRSVLASDIDPRSATVARE 220

Query: 140 NAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           NA  NGV     ++++  FS+        FD++++N           L   +R   P ++
Sbjct: 221 NATLNGVGSLVWSIRATGFSAPLFRARAPFDLVLAN----------ILANPLRRMAPAMA 270

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                      R +A      L+  GL            V+  + ++ L L+   +
Sbjct: 271 -----------RHLAPEAMVILS--GLL-----PQHTRGVIAAYRAQGLVLIRQLR 308


>gi|83746433|ref|ZP_00943485.1| putative methyltransferase [Ralstonia solanacearum UW551]
 gi|207738602|ref|YP_002256995.1| sam-dependent methyltransferases protein [Ralstonia solanacearum
           IPO1609]
 gi|83726974|gb|EAP74100.1| putative methyltransferase [Ralstonia solanacearum UW551]
 gi|206591970|emb|CAQ58876.1| sam-dependent methyltransferases protein [Ralstonia solanacearum
           IPO1609]
          Length = 274

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 30/137 (21%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +E      +LD+ +G+G   L L + S   +  GVDI    L+ A+  A   G+ +R 
Sbjct: 55  QWLELSPQSHLLDVCSGSGGPALFLARNS-GCRVTGVDIHPDGLQTARQLAQELGLQDRS 113

Query: 151 DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             +  D    +   +G FD +                  V     R++L           
Sbjct: 114 HFVDCDVRQRMPFPDGTFDALWC-------------VDSVIHIPDRLAL----------- 149

Query: 208 TIADGVSRHLNKDGLCS 224
                  R L   G   
Sbjct: 150 --LREWCRLLKPGGRFL 164


>gi|88811176|ref|ZP_01126432.1| UbiE/COQ5 methyltransferase [Nitrococcus mobilis Nb-231]
 gi|88791715|gb|EAR22826.1| UbiE/COQ5 methyltransferase [Nitrococcus mobilis Nb-231]
          Length = 234

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 27/144 (18%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +D      L  +   +  RILDL  GTG     + K  P    VGV++  + L+IA+   
Sbjct: 33  IDRRWKHRLVALMPHNPERILDLACGTGISTRTIAKRYPRCHVVGVELRQEYLDIAREKT 92

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G++     L        +  FD + S+  Y+                          
Sbjct: 93  ERLGINNIEWVLSRAEDYYSKMPFDCVSSS--YLAK------------------------ 126

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
             +  + +       L   GL  +
Sbjct: 127 -YAELKRLTHNSRSMLKDGGLLLM 149


>gi|95928734|ref|ZP_01311480.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM
           684]
 gi|95135079|gb|EAT16732.1| ribosomal L11 methyltransferase [Desulfuromonas acetoxidans DSM
           684]
          Length = 198

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  +E  +   ILDLG+GTG + +A   +      V +DI   A+   + N+  NGV  
Sbjct: 52  ILEDLEGVNGATILDLGSGTGILAIA-ALKLGARSAVCIDIDPAAVATCRLNSQLNGVDA 110

Query: 149 RFDTLQSDWFSSVEGLFDVIVSN 171
             D +     +  E  +D++++N
Sbjct: 111 DIDHVCGTLSNLPEAAYDLVLAN 133


>gi|304403936|ref|ZP_07385598.1| ribosomal protein L11 methyltransferase [Paenibacillus
           curdlanolyticus YK9]
 gi|304346914|gb|EFM12746.1| ribosomal protein L11 methyltransferase [Paenibacillus
           curdlanolyticus YK9]
          Length = 332

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL              ++D+GTG+G + +  +K       + VD+   A+  AK NA  
Sbjct: 161 TALCLRTLESVIHGGEEVIDVGTGSGILAIGAIKLGARA-VLAVDLDPVAVSSAKENAHL 219

Query: 144 NGVSERFDTLQSDWFSSVEG 163
           NG+SE+ D   SD    ++G
Sbjct: 220 NGLSEQIDVRLSDLLGVLKG 239


>gi|294783317|ref|ZP_06748641.1| ribosomal protein L11 methyltransferase [Fusobacterium sp.
           1_1_41FAA]
 gi|294480195|gb|EFG27972.1| ribosomal protein L11 methyltransferase [Fusobacterium sp.
           1_1_41FAA]
          Length = 313

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      I+D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFTNKTIIDIGTGSGILMIA-GKLLGAGEVYGTDIDEFSMEVAKENLLLNN 220

Query: 146 VS-ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S +    L+ +    +E   FD++V N                      ++        
Sbjct: 221 ISLDEVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 251

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKD 252
                + D +   L +D +     I  ++  +V+   ES  L +    +D
Sbjct: 252 DVLIKLLDEIKYILKEDSIVLFSGIIEDKLAEVISKAESVGLEVAEIKED 301


>gi|260752922|ref|YP_003225815.1| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258552285|gb|ACV75231.1| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 325

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 38/178 (21%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +   ++   + D+GTGTG +  A        + +  DI   A+E+AK NAV N V   
Sbjct: 168 RMKKAGQNFHNVADIGTGTGLLAFAARHLWHSARVIASDIDPVAVEVAKENAVVNHVPLG 227

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               Q +   +       +    PY      D L   +           G         +
Sbjct: 228 MGCRQVEMVVAAGMDNRQLKRRAPY------DLLIANIL---------AGP--------L 264

Query: 210 ADGVSRH---LNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +        L + G   +  G    Q+  V R +++  + L          DRV+L 
Sbjct: 265 IELAPSFVPALQEGGSLIL-AGLVAEQEQAVCRAYKNLGMRLA---------DRVVLG 312


>gi|113969454|ref|YP_733247.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella sp. MR-4]
 gi|113884138|gb|ABI38190.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Shewanella sp. MR-4]
          Length = 463

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 28/166 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +A +L  +  +   RILDL  G G   L L K     + +GV+     +  A+ NA  
Sbjct: 304 AMVAQALDWLAPQPGERILDLFCGMGNFSLPLAKL--GAEVIGVEGVPDMVSQARENAAA 361

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG+S        D  + +        S  P++  +    L           +  G  + L
Sbjct: 362 NGLS-NLTFYHGDLSADL--------SCEPWMGKIDKLLLDP---------ARAGAFESL 403

Query: 204 SHYRTI-------ADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFES 241
              + +              L +D    +E GY  QK+ ++ +F  
Sbjct: 404 QWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQ 449


>gi|114321403|ref|YP_743086.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227797|gb|ABI57596.1| cyclopropane-fatty-acyl-phospholipid synthase [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 417

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 9/138 (6%)

Query: 39  TNAIVRSLKHESI--HRILGWRDFY---NVRLTLSSDTFE-PRPETELLVDSALAFSLPR 92
             A  R     +I  H  LG   +    +  +T S   +  P  +     D+     L  
Sbjct: 124 ARANTRRGARRNIMAHYDLGNAFYRLWLDPGMTYSGAWYAAPAMDLAQAQDAKYTAILQT 183

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +  R    +L++G G G    A  +     +  GV +S   L  A+      G+ +R   
Sbjct: 184 LAARPGEHVLEIGCGWGGFAEAAARA--GLRVTGVTLSPNQLAWARERIRKAGLEDRVVL 241

Query: 153 LQSDWFSSVEGLFDVIVS 170
              D + ++ G +D +VS
Sbjct: 242 RLQD-YRALSGQYDHVVS 258


>gi|327481990|gb|AEA85300.1| ribosomal protein L11 methyltransferase [Pseudomonas stutzeri DSM
           4166]
          Length = 293

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 33/186 (17%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRD 59
           +A  D+ + L  +  L    +      V++D+  +R ++ N                   
Sbjct: 61  EADTDTDALLAHLQLLRGGDLPEHQTEVIEDQDWERSWMDNFQPMR-------------- 106

Query: 60  FYNVRLTLSSDTFEPRPE-TELLVDSALAF----------SLPRIEKR--DVVRILDLGT 106
           F +    + S    P P+   LL+D  LAF           L  ++ +  D   +LD G 
Sbjct: 107 FGHRLWIVPSWHAAPEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDAQTLDDRSLLDFGC 166

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165
           G+G + +A L      + VG DI  +ALE ++ NA  NG++ ERF     +     +   
Sbjct: 167 GSGILAIAGLLLGAH-QAVGTDIDPQALEASRDNAERNGIAPERFTLYLPEQLP--QEPA 223

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 224 DVVVAN 229


>gi|320036448|gb|EFW18387.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 333

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 42/150 (28%)

Query: 81  LVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           LVD  +  +L  +       +  R+LD+GTG+GA  +    E P  + +G D+S      
Sbjct: 72  LVDEMIKLTLGGLHLAPIGPNPQRVLDIGTGSGAWAIRFADEYPSAEVIGNDLSPT---- 127

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
                    +      L  D     E     FD I S            +   +RD    
Sbjct: 128 -----QPADIPPNVKFLVDDVEEEWEYGSRPFDFIHS----------RYMVFAIRDM--- 169

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                        + +       L   G  
Sbjct: 170 -------------KHLIQQAFNALRPGGWL 186


>gi|229824364|ref|ZP_04450433.1| hypothetical protein GCWU000282_01685 [Catonella morbi ATCC 51271]
 gi|229786164|gb|EEP22278.1| hypothetical protein GCWU000282_01685 [Catonella morbi ATCC 51271]
          Length = 499

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 60/141 (42%), Gaps = 25/141 (17%)

Query: 44  RSLKHESIHRILGWRD-FYNVRLTLSSDTF----EPRPETELLVDSALAFSLPRIEKRDV 98
           R L  + +     ++D    +  ++S  +F     P+       ++   ++L   +    
Sbjct: 304 RLLWGQPV-----YQDQMLGLDFSISPHSFYQVNTPQ------AEALYRYALEAADLSGS 352

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--- 155
             +LD   G G + LAL +++   +   ++I  +A+++A++NA  NG+S           
Sbjct: 353 ETVLDAYCGIGTISLALARQAG--QVYAMEIVPEAIDMARANAEANGLS-NVTFQAGKAE 409

Query: 156 ---DWFSSVEGLFDVIVSNPP 173
                + +    FDV V +PP
Sbjct: 410 EVLPAWQAEGIHFDVAVVDPP 430


>gi|58040423|ref|YP_192387.1| hypothetical protein GOX1995 [Gluconobacter oxydans 621H]
 gi|58002837|gb|AAW61731.1| Hypothetical protein GOX1995 [Gluconobacter oxydans 621H]
          Length = 280

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 56/172 (32%), Gaps = 21/172 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS---ER 149
           I  R    +L+ G G GA  L L    P   GVG++   + +++A+ N   N       +
Sbjct: 61  IPARAGETVLEAGCGAGAALLCLSARIPGVHGVGLEADPETIKLAEWNIWNNSGPTGLPK 120

Query: 150 FDTLQSDWFS----------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              LQ+              +  G F  +++NPP+           + R    R++L   
Sbjct: 121 LQILQAQLPDIPRTLRAFTPTANGRFHHVMANPPWHSPHGTP--SPDTRR---RLALSAE 175

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
               +        +++ +   G  +  +         +         +  + 
Sbjct: 176 T---TAPEEWIGALTKWVLPGGTLTFVLSTAVADRACQTLLENGCGSIQFYP 224


>gi|220908353|ref|YP_002483664.1| O-methyltransferase family 2 [Cyanothece sp. PCC 7425]
 gi|219864964|gb|ACL45303.1| O-methyltransferase family 2 [Cyanothece sp. PCC 7425]
          Length = 338

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 5/115 (4%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +     R+LDL  G+G   + L ++S   +   VD     + + + NA   G
Sbjct: 157 LGDVLKLAQVDKPFRVLDLAAGSGVWGITLAQQSAQVRVTAVDW-AGVIPVTQQNAERFG 215

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           +S+RF  + +D  ++  G  +D+ V               L  R F    +L  G
Sbjct: 216 LSDRFQFIAADLLTADFGTGYDLAVLGHILHSEGEARSRQLFSRLFP---ALAAG 267


>gi|311276624|ref|XP_003135289.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog [Sus scrofa]
          Length = 657

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 19/142 (13%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G      D   +++ +S D F    +        L  ++  +   + 
Sbjct: 441 RCSHQQSPYQLLFGEPHIFEDLLGLKIRISPDAFF---QINTAGAEMLYRTVGELSGVNS 497

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             IL D+  GTG + L+L + +   + +G+++  +A+E A+  A  NG++       R +
Sbjct: 498 DTILLDICCGTGVIGLSLAQYT--SQVLGIELVEQAVEDARWTAAFNGITNCEFHTGRAE 555

Query: 152 TLQSDWFSSVE-GLFDVIVSNP 172
            +      S E G F V V NP
Sbjct: 556 KILPQLLKSKEDGQFIVAVVNP 577


>gi|326790887|ref|YP_004308708.1| methyltransferase [Clostridium lentocellum DSM 5427]
 gi|326541651|gb|ADZ83510.1| methyltransferase [Clostridium lentocellum DSM 5427]
          Length = 184

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 33/156 (21%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++        I +      LDL +G+GA+ +         + V V+   KAL
Sbjct: 22  RPTTDRIKETLFNMIAFDIPE---CEFLDLFSGSGAMAIE-ALSRGGKRAVLVEKDTKAL 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              + N     +      + SD F +++      FD+I  +PPY    I   L       
Sbjct: 78  ACIEQNLEKTRLKAEAKVVASDVFEALKRLEGEQFDIIFMDPPYALENIQTVLE------ 131

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                             I     + L +DG   +E
Sbjct: 132 ------------------ILAK-KKFLKEDGYIILE 148


>gi|261839699|gb|ACX99464.1| hypothetical protein HPKB_0878 [Helicobacter pylori 52]
          Length = 385

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 57/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K +   +L+   G G    + LK   
Sbjct: 8   YKLDIKTLGQVFTPKN----IVDFMLTL------KHNQGSVLEPSAGDG----SFLKRLK 53

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 54  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 97

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 98  IAPSAKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 142


>gi|149174918|ref|ZP_01853542.1| hypothetical protein PM8797T_11099 [Planctomyces maris DSM 8797]
 gi|148846255|gb|EDL60594.1| hypothetical protein PM8797T_11099 [Planctomyces maris DSM 8797]
          Length = 252

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 28/131 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             ++ILDLGTGT  + + + +     + +  D++ + L++A+ N    G+ +      +D
Sbjct: 76  QPLQILDLGTGTALIPIEICQRVSQLQIIATDLAAEMLKVAQQNIQRAGLDKSILLEHAD 135

Query: 157 --WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                  +  FD ++SN       ++  +       +P+               +   + 
Sbjct: 136 AKLLPCKDQSFDGVISN------SLIHHIP------EPQS--------------VFTEIR 169

Query: 215 RHLNKDGLCSV 225
           R +   G   V
Sbjct: 170 RVIKPGGFLFV 180


>gi|86607154|ref|YP_475917.1| cyclopropane fatty acyl phospholipid synthase [Synechococcus sp.
           JA-3-3Ab]
 gi|86555696|gb|ABD00654.1| cyclopropane-fatty-acyl-phospholipid synthase [Synechococcus sp.
           JA-3-3Ab]
          Length = 379

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 78/211 (36%), Gaps = 40/211 (18%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPR 75
             ++++  DS L +RQR      + +       H  LG   +    + RL  S   ++  
Sbjct: 87  PVRLLLALDSRLVNRQRGKGAFVVGQR------HYDLGNDLYEAMLDRRLIYSCAYWDGG 140

Query: 76  PETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
            +T      A L     +++ +  +R+LD+G G G     L  E    + VG+ +S +  
Sbjct: 141 AQTLDEAQEAKLDLIARKLDLQPGMRVLDIGCGWGGTAQYLA-ERYGVQVVGITVSQEQA 199

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
           ++A        V  R +      +   +G FD I+S                V  F+   
Sbjct: 200 KLASERCQGLPVEIRLED-----YRQTQGKFDRIIS----------------VGMFE--- 235

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  G  +YRT      R LN +GL  +
Sbjct: 236 -----HVGYRNYRTFMQVARRLLNDNGLFLL 261


>gi|328354743|emb|CCA41140.1| ribosomal RNA large subunit methyltransferase F [Pichia pastoris
           CBS 7435]
          Length = 333

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ +++ L      PR    L     +   + + +  D   ILD+GTG   +   L   
Sbjct: 50  EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ----SDWFSSVEGLFDVIVSNPP 173
              ++ +G DI  ++LE AK     N V SER          D F  +E   DV+++NPP
Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIEN-CDVVMTNPP 168

Query: 174 YIESVIVDCLGLE--VRDFDP-RISLDGGI 200
           + +   +     E  V    P  ++ +GG 
Sbjct: 169 FYDETGIKQNKPEKPVLVGKPTELATEGGE 198


>gi|329915400|ref|ZP_08276255.1| Ribosomal protein L11 methyltransferase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327544926|gb|EGF30275.1| Ribosomal protein L11 methyltransferase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 307

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 1/86 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +     + +LD G G+G + L +  +      +GVDI  +A+E A  N+  N 
Sbjct: 157 LCMEWLEVHAPAELSVLDYGCGSGILAL-VASKLGAATVIGVDIDPQAIESANFNSERND 215

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
               +          V   FD++V+N
Sbjct: 216 CEIDYFLPDEFHHDDVLQRFDIVVAN 241


>gi|254572646|ref|XP_002493432.1| hypothetical protein [Pichia pastoris GS115]
 gi|238033231|emb|CAY71253.1| Hypothetical protein PAS_chr4_0027 [Pichia pastoris GS115]
          Length = 387

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +++ +++ L      PR    L     +   + + +  D   ILD+GTG   +   L   
Sbjct: 50  EYFQLKVQLDKTRLCPRIPNRLKYLRLVGSLVEQFKLGDSPLILDIGTGHTCIYPLLGSR 109

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ----SDWFSSVEGLFDVIVSNPP 173
              ++ +G DI  ++LE AK     N V SER          D F  +E   DV+++NPP
Sbjct: 110 LTSWRFIGTDIDERSLECAKKVLEENNVSSERIQLKLVRSGDDPFMDIEN-CDVVMTNPP 168

Query: 174 YIESVIVDCLGLE--VRDFDP-RISLDGGI 200
           + +   +     E  V    P  ++ +GG 
Sbjct: 169 FYDETGIKQNKPEKPVLVGKPTELATEGGE 198


>gi|254465963|ref|ZP_05079374.1| ribosomal protein L11 methyltransferase [Rhodobacterales bacterium
           Y4I]
 gi|206686871|gb|EDZ47353.1| ribosomal protein L11 methyltransferase [Rhodobacterales bacterium
           Y4I]
          Length = 290

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 50/190 (26%)

Query: 74  PRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF                    +     ++ D+G GT  + +A    
Sbjct: 110 PAGRIPLLIEAAMAFGTGHHGTTLGCLKALDHLLDQGFQGEKVADIGCGTAVLAMA-AAR 168

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
                 +  DI   A+++A++N   NG+  +   L++  F   +      +D+I +N   
Sbjct: 169 VWDGTILASDIDEVAVDVAEANLKANGMEGQVICLEAAGFDHPDLQAQAPYDLIFAN--- 225

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKV 233
           I                P ++L             A  ++ +L   G   +  I   Q  
Sbjct: 226 ILKG-------------PLVAL-------------APDLAANLRPGGYAILSGILNEQAD 259

Query: 234 DVVRIFESRK 243
           DVV ++    
Sbjct: 260 DVVAVYAQNG 269


>gi|313633216|gb|EFS00089.1| ribosomal protein L11 methyltransferase [Listeria seeligeri FSL
           N1-067]
 gi|313637807|gb|EFS03152.1| ribosomal protein L11 methyltransferase [Listeria seeligeri FSL
           S4-171]
          Length = 314

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 22/138 (15%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                +++D+GTG+G + +A  K       +  D+   A+  A+ N   N   +     Q
Sbjct: 172 MQPGDQLIDVGTGSGVLSIASAKLGAKS-ILATDLDEVAIRAAEENIRLNKTDDIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSN 171
           ++    +     D++V+N
Sbjct: 231 NNLLQDINQTNVDIVVAN 248


>gi|312864342|ref|ZP_07724575.1| ribosomal protein L11 methyltransferase [Streptococcus downei
           F0415]
 gi|311100063|gb|EFQ58274.1| ribosomal protein L11 methyltransferase [Streptococcus downei
           F0415]
          Length = 317

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    +LD+GTG+G   L++       K     D+   A+ +A+ N   N          
Sbjct: 170 RGGETVLDVGTGSGV--LSIASSLLGAKDIYAYDLDEVAIRVAQENIDLNPDMANVHVAT 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            +    V+    VIV+N
Sbjct: 228 GNLLEGVDQEAHVIVAN 244


>gi|331229725|ref|XP_003327528.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309306518|gb|EFP83109.1| hypothetical protein PGTG_09062 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 225

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 19/136 (13%)

Query: 57  WRDFYNVR-LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
             +   +R         E    +  L    +  +    E     R+LDLG G G + +A 
Sbjct: 10  EAELQGLRGFNAPKIELEQYVTSAHLASRMMFTAQSTYEDVLDKRVLDLGCGCGILSIA- 68

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDW-----FSSVEG------ 163
                    +GVD+   AL +A++N  +  +S+   D +Q+D      F  + G      
Sbjct: 69  STLLGSAYTLGVDLDPDALLVARNNLASLDISDSTIDFIQADLSSSSSFRDLFGGHSRND 128

Query: 164 -----LFDVIVSNPPY 174
                 FD +V NPP+
Sbjct: 129 SEEEPFFDTVVMNPPF 144


>gi|242241085|ref|YP_002989266.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703]
 gi|242133142|gb|ACS87444.1| ribosomal protein L11 methyltransferase [Dickeya dadantii Ech703]
          Length = 295

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +      
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK- 216

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 217 DQPADLSADVVVAN 230


>gi|166366598|ref|YP_001658871.1| McyA protein [Microcystis aeruginosa NIES-843]
 gi|166088971|dbj|BAG03679.1| McyA protein [Microcystis aeruginosa NIES-843]
          Length = 2787

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 693 SQTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 752

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 753 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 798

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 799 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESERFDTIILN--- 854

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 855 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 887

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 888 VRNLQLMEAFHADVELYK 905


>gi|18920646|gb|AAL82382.1| McyA [Microcystis aeruginosa]
          Length = 2795

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 701 SQTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 760

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 761 SYTGEP-------IPAAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 806

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 807 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESERFDTIILN--- 862

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 863 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 895

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 896 VRNLQLMEAFHADVELYK 913


>gi|319779763|ref|YP_004139239.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317165651|gb|ADV09189.1| methyltransferase small [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 339

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 45/146 (30%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALEIAKSN 140
           +D+     +  +       I DL  G G V   +   SP  +     +    ALE AK N
Sbjct: 180 IDTGSKLLVENLPNDLRGNIADLCAGWGYVAAEIAARSPGVQALDLYEADFAALEAAKLN 239

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
                     +    D     VE  +D I  NPP+  S          R  +P I    G
Sbjct: 240 LAAVSQPIARNFFWIDLLKEPVEKRYDAIAMNPPFHRS----------RAAEPEI--GAG 287

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +    ++ L   G   +
Sbjct: 288 ---------MIRAAAKALKPGGRLFM 304


>gi|238855603|ref|ZP_04645904.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 269-3]
 gi|238831747|gb|EEQ24083.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 269-3]
          Length = 479

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
             A  R +        L  + F +       + + PR   + LV+           +   
Sbjct: 146 KEAKERDILGRVYEYFL--QKFASNEKKNGGEFYTPRSVVKTLVEMV---------EPFK 194

Query: 99  VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + D   G+G + +   +       +       G + +    ++AK N    G+   F 
Sbjct: 195 GTVYDPCCGSGGMFVQSEQFVQEHQGQIADLSVYGQESNPTTWKLAKLNLAIRGIDNNFG 254

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG----GIDGLS 204
             Q+D F++       FD I++NPP+     V   G E    DPR    G    G    +
Sbjct: 255 AHQADTFTNDLHKGTHFDYILANPPF----NVKKWGGEKLKDDPRWK-YGIPPEGNANYA 309

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               I       LN DG    
Sbjct: 310 WIEHIISK----LNPDGKAGF 326


>gi|311745306|ref|ZP_07719091.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
 gi|126577839|gb|EAZ82059.1| putative methyltransferase YbiN [Algoriphagus sp. PR1]
          Length = 319

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 14/139 (10%)

Query: 58  RDFYNV-RLTLSSDTFEP----RPETEL-LVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           + FY +    + S    P    R +    L D     +  ++ + + V +LDLGTG   +
Sbjct: 66  KHFYQISDWDIPSGYLCPPIPGRVDYLHYLADLLSDCNKGKLPEGEKVNVLDLGTGANCI 125

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTN-----GVSERFDTLQSDWFSSV---EG 163
              L      +  VG +I  KA+  A+ N  +N      V+ R      +  S +   + 
Sbjct: 126 YPLLGTRIYNWNFVGSEIDPKAIHSAQQNLNSNPQILKKVNLRLQENPKEILSGIIRSDD 185

Query: 164 LFDVIVSNPPYIESVIVDC 182
           +FD+++ NPP+ ES     
Sbjct: 186 VFDLVLCNPPFHESKEAAL 204


>gi|11498311|ref|NP_069538.1| hypothetical protein AF0704 [Archaeoglobus fulgidus DSM 4304]
 gi|2649912|gb|AAB90537.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 273

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +  R+L +  G G   + + K +   + VGV+++  A+E  + N   N V      ++ 
Sbjct: 119 GEGERVLVMFAGVGPYPIVIAKLARPREVVGVELNPHAVEYFRQNVRLNKVEGVVKVIEG 178

Query: 156 DWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           D       + G FD +V   PY     +  L  +VR 
Sbjct: 179 DVEEVVPQLSGQFDRVVMPAPYSAENFIHLLRGKVRR 215


>gi|226942497|ref|YP_002797570.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ]
 gi|226717424|gb|ACO76595.1| SAM-dependent methyltransferase [Azotobacter vinelandii DJ]
          Length = 397

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         + + VD S  AL+  + NA  NGV+E+   ++ D
Sbjct: 220 KGKRVLDLFSYVGGWGVQ-AAAFGASEVMCVDGSALALDGVERNAALNGVAEKMACVEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDV++++PP       D                   +G + YR + 
Sbjct: 279 VFEAMKELKAAEERFDVVIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 322 EAAMRLLNKDGILV 335


>gi|312885963|ref|ZP_07745591.1| demethylmenaquinone methyltransferase [Mucilaginibacter paludis DSM
           18603]
 gi|311301500|gb|EFQ78541.1| demethylmenaquinone methyltransferase [Mucilaginibacter paludis DSM
           18603]
          Length = 243

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 25/154 (16%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             ++ +++K     ILD+ TGTG      LK     K +GVDIS   L++A+      G+
Sbjct: 47  KIAINQLKKDKPKLILDVATGTGDFAFEALKILKPEKIIGVDISRGMLDVAEQKITKRGL 106

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           + +F+    D   S + LFD         +S     +   VR+F+   +      GL+  
Sbjct: 107 AGQFEVRMGD---SEKLLFDA--------DSFDAVTVAYGVRNFENLQA------GLADI 149

Query: 207 RTIADGVSRHLNKDGL-CSVEIGYNQKVDVVRIF 239
           R +       L   G    +E    +   V +++
Sbjct: 150 RRV-------LRPGGKAVILEFSKPKVFPVKQLY 176


>gi|291616872|ref|YP_003519614.1| RumB [Pantoea ananatis LMG 20103]
 gi|291151902|gb|ADD76486.1| RumB [Pantoea ananatis LMG 20103]
          Length = 380

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +F  V L +   +F    +T   V SAL A +   + +  V  + DL  G G   L    
Sbjct: 196 EFNGVPLWIRPQSFF---QTNPQVASALYATARDWVRQLPVTSMWDLFCGVGGFGLHCA- 251

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIV-SNPPY- 174
            SP     G++IS +A++ A+ +A   G++   F  L S  F++       +V  NPP  
Sbjct: 252 -SPTLALTGIEISPEAIQCAQRSAQMLGLNNVSFAALDSTAFATERDRVPQLVLVNPPRR 310

Query: 175 -IESVIVDCLGLEVRDF 190
            I   + D L     D+
Sbjct: 311 GIGEALCDYLSAMAPDY 327


>gi|254501926|ref|ZP_05114077.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Labrenzia
           alexandrii DFL-11]
 gi|222437997|gb|EEE44676.1| Cyclopropane-fatty-acyl-phospholipid synthase family [Labrenzia
           alexandrii DFL-11]
          Length = 390

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 3/85 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   + +++ +  + +L++G G G++ + + K     K   +++S + ++IA+      G
Sbjct: 147 LTHLVAKLDLKPGMEVLEIGGGWGSLAIQMAKA--GAKVTSLNVSPEQVKIAEERVREAG 204

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           V ++   +  D +   EG FD ++S
Sbjct: 205 VEDKVTFVLKD-YREFEGQFDRVIS 228


>gi|170084783|ref|XP_001873615.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651167|gb|EDR15407.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 216

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 74/214 (34%), Gaps = 33/214 (15%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFKGVGVD 128
             +EP  +T L +  AL      +        L++G+G+G V   L K   P    +  D
Sbjct: 17  RVYEPAEDTFL-LLDALELDANALRAAKPQICLEIGSGSGCVSTFLAKILGPSVLYLCTD 75

Query: 129 ISCKALEIAKSNAVTNGVSERF--DTLQSDWFSSVEGLF----DVIVSNPPYIES-VIVD 181
           I+  A           GV  +   D + +   S+V        D+I+ NPPY+ +     
Sbjct: 76  INFHACRCT----FLTGVQNQVILDPINTSLDSAVRYRLVHGVDIILFNPPYVPTSSDEA 131

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVR---- 237
               E R  +   +  GG +G+       + V   ++  G   +       V V +    
Sbjct: 132 EDAQEGRTIEGSWA--GGFNGMELTNVFLERVEHLMSLQGKFYL-------VAVKQNDIE 182

Query: 238 -----IFESRKLFLVNAFKDYGGNDR--VLLFCR 264
                +  S  L      +   G +   V+ F R
Sbjct: 183 HIRRSMLHSYGLKSEIVLQRRAGREHLFVVRFTR 216


>gi|260907290|ref|ZP_05915612.1| putative methyltransferase [Brevibacterium linens BL2]
          Length = 406

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 21/126 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                ILDLG G G +  A ++ +    G GVD+S  A+  A+  A  NG+        +
Sbjct: 263 GSPNSILDLGCGNGWLLTAAMQVTAAKNGTGVDVSKAAVTSARETAEANGLEVDTILADA 322

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
               ++ G  D+I+ NPP+ +   ++                 G         +    S+
Sbjct: 323 TDVQALSGGHDLILLNPPFHQGTTIETDTA------------AG---------LMATASK 361

Query: 216 HLNKDG 221
            L   G
Sbjct: 362 LLAPGG 367


>gi|330505434|ref|YP_004382303.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01]
 gi|328919720|gb|AEB60551.1| SAM-dependent methyltransferase [Pseudomonas mendocina NK-01]
          Length = 399

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 221 KGKRVLDLFSYIGGWGVQ-AAAFGASEVFCVDASGFALDGVERNANLNGFAEKVTCVEGD 279

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F+++      E  FDV++++PP       D                   +G + YR + 
Sbjct: 280 VFAALRELKSAEERFDVVIADPPAFIKRKKDI-----------------KNGEAAYRRLN 322

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 323 ETAMRLLNKDGILV 336


>gi|282866300|ref|ZP_06275346.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           ACTE]
 gi|282558886|gb|EFB64442.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           ACTE]
          Length = 434

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 51/139 (36%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  ++  R+LD+G G G++ +   +E    +  GV +S +    A+      G
Sbjct: 186 LDLVCRKLALKEGDRLLDVGCGWGSMAIHAAREY-GAQVTGVTLSTEQAAFARKRIAEEG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 245 LTDRIEIRVQDYRDVRDGPYDAISS-------IGMAEHVGSVR----------------- 280

Query: 206 YRTIADGVSRHLNKDGLCS 224
           +R  AD +   L   G   
Sbjct: 281 FREYADDLYALLRPGGRLL 299


>gi|242764692|ref|XP_002340826.1| TAM domain methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218724022|gb|EED23439.1| TAM domain methyltransferase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 269

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 35/143 (24%), Gaps = 38/143 (26%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
                 L     RD  RILD+GTG+G   + +    P     G D+S             
Sbjct: 8   QVNDDKLHFAPLRDPKRILDIGTGSGIWPIEMASLFPEASITGTDLSP---------VQP 58

Query: 144 NGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             V      L  D           FD       YI    +      V+D           
Sbjct: 59  TEVPPNVHFLVEDATEEWLWEPNHFD-------YIRLSNMTGSFPSVKD----------- 100

Query: 201 DGLSHYRTIADGVSRHLNKDGLC 223
                   I     R L   G  
Sbjct: 101 --------ILRKAMRVLKPGGWL 115


>gi|87307314|ref|ZP_01089459.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM
           3645]
 gi|87290054|gb|EAQ81943.1| hypothetical protein DSM3645_17365 [Blastopirellula marina DSM
           3645]
          Length = 389

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 24/131 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+   TG   LA  K     + +G+D S KA+++A+ NA  NG+S        D F 
Sbjct: 217 RVLDMFCYTGGFALAAAKLGGASEVIGIDGSDKAIDLARRNAERNGLS-NVRFESVDAFD 275

Query: 160 SVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++        FD ++ +PP       +                     L  Y  I    
Sbjct: 276 HLKALVDAGEKFDAVILDPPKFTKTRRNINEA-----------------LKAYYHINRQA 318

Query: 214 SRHLNKDGLCS 224
              LN  G+  
Sbjct: 319 VNLLNPGGILV 329


>gi|323691872|ref|ZP_08106126.1| RsmD family RNA methyltransferase [Clostridium symbiosum WAL-14673]
 gi|323504079|gb|EGB19887.1| RsmD family RNA methyltransferase [Clostridium symbiosum WAL-14673]
          Length = 186

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 23/135 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL +G+GA+ +  L        V V+ + +A +  + N     + ++   +  D  +++
Sbjct: 46  LDLFSGSGAIGIEALSRGAEM-AVMVEHNPRAAQCIRENLKITHLEDKATVMNCDVITAL 104

Query: 162 EGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           + L      FD+I  +PPY        L   V ++    +L    D L     I    SR
Sbjct: 105 KRLEERQLVFDIIFMDPPY-----NQLLEKAVLEYLAHSALT-HADTL-----IIAEASR 153

Query: 216 -----HLNKDGLCSV 225
                +L++ G   V
Sbjct: 154 ETGMDYLSELGFELV 168


>gi|319775089|ref|YP_004137577.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3047]
 gi|329123000|ref|ZP_08251571.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC
           11116]
 gi|317449680|emb|CBY85886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3047]
 gi|327471931|gb|EGF17371.1| ribosomal protein L11 methyltransferase [Haemophilus aegyptius ATCC
           11116]
          Length = 294

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSDE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|301111404|ref|XP_002904781.1| putative methyltransferase METT10D [Phytophthora infestans T30-4]
 gi|262095111|gb|EEY53163.1| putative methyltransferase METT10D [Phytophthora infestans T30-4]
          Length = 469

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----W 157
           +D+GTG   +   L      +K +  +I   + + AK N   N +       ++      
Sbjct: 127 IDVGTGANCIYALLGATMNKWKFIATEIDSDSYQCAKKNVARNQLEPLISVKRTHTNKLL 186

Query: 158 FSSV-----EGLFDVIVSNPPYIESVIVDCLGLE 186
              +     E  FD ++ NPP+ +++       +
Sbjct: 187 LEPLKDELPERKFDFVMCNPPFFDNMNEADTNPD 220


>gi|226365309|ref|YP_002783092.1| hypothetical protein ROP_59000 [Rhodococcus opacus B4]
 gi|226243799|dbj|BAH54147.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 380

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 23/140 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LPR+  R    + DLG GTG + ++L +  P    +  D S  A+  A + A  NG
Sbjct: 227 LLDFLPRVNPRARAAV-DLGCGTGILAVSLARLLPEVSVIATDQSSAAVASAAATARANG 285

Query: 146 VSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R  TL+ D  SS+     DV++ NPP+     V                 GG     
Sbjct: 286 LDGRISTLRDDAMSSLATDSQDVVLCNPPFHVGAAVHT---------------GGAS--- 327

Query: 205 HYRTIADGVSRHLNKDGLCS 224
               +     R L   G   
Sbjct: 328 ---KMFAEAGRVLRPGGELW 344


>gi|218888238|ref|YP_002437559.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759192|gb|ACL10091.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 286

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   A++        R  +R LDLGTG+G + +   K      GV  DI   A+E 
Sbjct: 132 PTTALCLGAVSELAASGRLRPGLRFLDLGTGSGILAIGCAKL--GMTGVATDIDMLAVEN 189

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           A+ N V N V+   D       ++    +DV+++N   I +  +  L  ++ 
Sbjct: 190 AEENRVINAVAPAIDVRLGSTEAAQGERYDVLLAN---ILAQPLKDLAPDIL 238


>gi|311272607|ref|XP_003133515.1| PREDICTED: methyltransferase-like protein 5-like [Sus scrofa]
          Length = 262

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 58/164 (35%), Gaps = 15/164 (9%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ES-IHRILGWRDFYNVRLTLSSDTFE 73
           GL   Q  +   S +   +R          LK  ES + ++ G   F   +L L    + 
Sbjct: 17  GLQDTQGKMRRSSAVKPFERTVFLKMKKLRLKELESRLQQVDG---FEKPKLLLEQ--YP 71

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
            RP         L       +  +   + DLG G G + +            G DI   A
Sbjct: 72  TRPHIAA---CMLYTIHNTYDDIENKMVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDA 127

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
           LEI   N     ++   D +Q D  S    +   FD ++ NPP+
Sbjct: 128 LEIFNRNVEEFELT-NVDMVQCDVCSLSNKMSKSFDTVIMNPPF 170


>gi|126465534|ref|YP_001040643.1| RNA methylase [Staphylothermus marinus F1]
 gi|126014357|gb|ABN69735.1| putative RNA methylase [Staphylothermus marinus F1]
          Length = 348

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 56/177 (31%), Gaps = 32/177 (18%)

Query: 54  ILGWRDFY--NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           + G R  +    R+       +P      L  + L  S      RD   I+D   G G +
Sbjct: 160 LTGSRSLHRRGYRIYDHPAALKP-----TLAYAMLTLS----GTRDKQVIVDPMCGGGTI 210

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVI 168
            +            G D + + +  AK NA  +GV  +      D        +   D I
Sbjct: 211 PIEAALLHEEAYIYGYDRNPRHIRGAKLNAYASGVYGKVVFGVWDARRLHEIFDEQVDHI 270

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           VSNPPY    I     + +R                 YR   D   + L   G  ++
Sbjct: 271 VSNPPY---GIRYGDPVAIRK---------------LYRDFLDSTYKSLKPGGRLTI 309


>gi|86607412|ref|YP_476175.1| hypothetical protein CYA_2810 [Synechococcus sp. JA-3-3Ab]
 gi|86555954|gb|ABD00912.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 396

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 1/88 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A AF       R  VRILD G G+G     +  ++P  +    D+S +ALEIAK+    
Sbjct: 31  QAYAFCTGSHPGRRKVRILDAGCGSGVGTEYIAHQNPEAEIWAFDLSGRALEIAKARCRA 90

Query: 144 NGV-SERFDTLQSDWFSSVEGLFDVIVS 170
           +     +F  L       + G FD I  
Sbjct: 91  SQAPPVQFCQLNVYDIDQLPGQFDFINC 118


>gi|313226087|emb|CBY21230.1| unnamed protein product [Oikopleura dioica]
          Length = 357

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 57/157 (36%), Gaps = 34/157 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-----FD 151
             + ILD+G  +G + L + ++    K VGVDI  K +E+A+ N       E+     F 
Sbjct: 139 HGLDILDIGCNSGHLTLLIARDLKPRKIVGVDIDEKLIEMAQKNIRHYCPEEKKFPASFS 198

Query: 152 TLQSDWFSS-------------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS--- 195
            L     +                     I  N  Y+ S   + L  +  ++D  I+   
Sbjct: 199 KLYGPLRAPYVNTGLSASRGKDFPENVHFINGN--YVFSCD-EFLERQEPEYDTIIAFSV 255

Query: 196 -----LDGGIDGL-SHYRTIADGVSRHLNKDGLCSVE 226
                L+ G +G+   +R I       L   G   +E
Sbjct: 256 SKWVHLNNGDNGIKRFFRRIFRQ----LRPGGRFLLE 288


>gi|300781317|ref|ZP_07091171.1| RsmD family RNA methyltransferase [Corynebacterium genitalium ATCC
           33030]
 gi|300533024|gb|EFK54085.1| RsmD family RNA methyltransferase [Corynebacterium genitalium ATCC
           33030]
          Length = 195

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 10/134 (7%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G       ++ +  +   P  +        L  SL         R+LDL +G+GA+ L
Sbjct: 5   ISGEA--RGRKIKVPPEGTRPTSDRA---KEGLFSSLQVRFGFVGKRVLDLFSGSGALGL 59

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF--SSVEGLFDVIVS 170
                    + V V+   KA+EI K NA   G  +   + +++  +   +    FD++++
Sbjct: 60  EAASRGAD-EVVLVESDPKAVEIIKHNAQAVGHPNVHIEPVKASAYVPRAPRAYFDMVLA 118

Query: 171 NPPY-IESVIVDCL 183
           +PPY +    V  +
Sbjct: 119 DPPYDLPDEDVAAM 132


>gi|303313255|ref|XP_003066639.1| methyltransferase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240106301|gb|EER24494.1| methyltransferase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 333

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 44/150 (29%), Gaps = 42/150 (28%)

Query: 81  LVDSALAFSLPRIE----KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           LVD  +  +L  +       +  R+LD+GTG+GA  +    E P  + +G D+S      
Sbjct: 72  LVDEMIKLTLGGLHLAPIGPNPQRVLDIGTGSGAWAIRFADEYPSAEVIGNDLSPT---- 127

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
                    +      L  D     E     FD I S            +   +RD    
Sbjct: 128 -----QPADIPPNVKFLVDDVEEEWEYGGRPFDFIHS----------RYMVFAIRDM--- 169

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                        + +       L   G  
Sbjct: 170 -------------KHLIQQAFNALRPGGWL 186


>gi|303312171|ref|XP_003066097.1| hypothetical protein CPC735_053220 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240105759|gb|EER23952.1| hypothetical protein CPC735_053220 [Coccidioides posadasii C735
           delta SOWgp]
 gi|320040083|gb|EFW22017.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 268

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 69/204 (33%), Gaps = 49/204 (24%)

Query: 71  TFEPRPETELLVD--------SALAFSLPRIEKRDVVR--ILDLGTGTGAVCLALLKESP 120
            +EP  ++ LL+D          L+       K   +   ++++GTG+G V   +   S 
Sbjct: 15  IYEPAEDSYLLLDTLSSKPEAEWLSSKFSSQPKSQSISPLVVEIGTGSGVVLAFVAANSK 74

Query: 121 FFKG--------VGVDISCKA-----LEIAKSNAVTNGVSER-----------FDTLQSD 156
              G        V V+I+  A     + IA       G                 T+  D
Sbjct: 75  HILGRSDILTLGVDVNINACAATAKTVHIALEEKRKPGHQNEGETRGELAPQMIATIAGD 134

Query: 157 WFSSVE-GLFDVIVSNPPYIESVIVDCLG---LEVR-----DFDPRISL-----DGGIDG 202
             S +  G  D+++ NPPY+ +  +  L     E        F+    L      GG  G
Sbjct: 135 LCSPLRAGAVDILIFNPPYVPTPELPPLPSPDPETPGIGTSKFEQDSHLLSLSYAGGEYG 194

Query: 203 LSHYRTIADGVSRHLNKD-GLCSV 225
           +     +   +   LN   G+  +
Sbjct: 195 METTNRLLQDLPEVLNPHRGVAYI 218


>gi|159184152|ref|NP_353117.2| ribosomal RNA small subunit methyltransferase [Agrobacterium
           tumefaciens str. C58]
 gi|159139487|gb|AAK85902.2| ribosomal RNA small subunit methyltransferase [Agrobacterium
           tumefaciens str. C58]
          Length = 338

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 22/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
           VD        R+         D G G G + + L ++SP   +    +    ALE AK+N
Sbjct: 178 VDDGSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNALEFAKTN 237

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            + N           D      +  +D+I+ NPP+  +             +P +     
Sbjct: 238 LLENNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAA---------EPALG---- 284

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +      +  L   G   +
Sbjct: 285 -------QAFIKAAAGALRSGGKLLM 303


>gi|294055053|ref|YP_003548711.1| Cyclopropane-fatty-acyl-phospholipid synthase [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614386|gb|ADE54541.1| Cyclopropane-fatty-acyl-phospholipid synthase [Coraliomargarita
           akajimensis DSM 45221]
          Length = 341

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 29/168 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              L  S   +    +T  + + A L  S  R +  D   IL+LG G G++ L + +  P
Sbjct: 76  GPHLKYSCGLWNHPSDTLEVSEQAMLQLSCERAQIEDGHSILELGCGWGSLSLWMAEHYP 135

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
             +   V  S    +  + N  T    +    L +D  + S E  +D IVS         
Sbjct: 136 NSRITTVSNSHSQADYIR-NQATQRQLDNLTVLTADINNFSTESSYDRIVSV-------- 186

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
              +   VR+     +L              + +   L  DGL  V I
Sbjct: 187 --EMFEHVRNH---HALF-------------ERIRNWLKPDGLLFVHI 216


>gi|148977179|ref|ZP_01813806.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium
           SWAT-3]
 gi|145963461|gb|EDK28724.1| ribosomal protein L11 methyltransferase [Vibrionales bacterium
           SWAT-3]
          Length = 295

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+E+ +          EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQ--DQPEGLLA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|289670265|ref|ZP_06491340.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 431

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  ++A       G
Sbjct: 188 LERICQKLRLGPQHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFDLATQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLRD-YRDLEGRFDRVVS 270


>gi|285019258|ref|YP_003376969.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           albilineans GPE PC73]
 gi|283474476|emb|CBA16977.1| probable cyclopropane-fatty-acyl-phospholipid synthase protein
           [Xanthomonas albilineans]
          Length = 442

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPR--------IEKRDVVRILDLGTGTGAV 111
           F +  L  SS  F  R     L ++AL  +  R        ++ +    ++++GTG G  
Sbjct: 167 FLDSNLMYSSALF--RESDAALGEAALERAAERKLQRICAKLDLQPHHHVIEIGTGWGGF 224

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            L   K     +     IS +   +A+      G+S+R + L  D +  ++G +D +VS
Sbjct: 225 ALHAAKHH-GCRVTTTTISREQYALARQRVEAAGLSDRVEVLLRD-YRDLDGRYDRLVS 281


>gi|242310141|ref|ZP_04809296.1| ribosomal protein L11 methyltransferase [Helicobacter pullorum MIT
           98-5489]
 gi|239523438|gb|EEQ63304.1| ribosomal protein L11 methyltransferase [Helicobacter pullorum MIT
           98-5489]
          Length = 275

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGTGTGA 110
           +  +    FE + +   L+VD ALAF           L  + K D    R+LD+G G+G 
Sbjct: 96  KYYIHPSWFEAKKDKINLIVDPALAFGSGHHGSTFGCLEALSKIDLEGKRLLDVGCGSGI 155

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-VSERFDTLQSDWFSSVEGLFDVIV 169
             L+L  +         D    A+   K N   NG V ++      D  +S +G FDV+V
Sbjct: 156 --LSLAAKKSGANVWCCDTDEVAIIATKDNMQKNGVVLDKVFLGTIDKITSEKGSFDVVV 213

Query: 170 SN 171
           +N
Sbjct: 214 AN 215


>gi|90407141|ref|ZP_01215329.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3]
 gi|90311717|gb|EAS39814.1| ribosomal protein L11 methyltransferase [Psychromonas sp. CNPT3]
          Length = 230

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 28/181 (15%)

Query: 61  YNVRLTLSSDTFEPRPETE---LLVDSALAF----------SLPRIEKRDV--VRILDLG 105
           +  RL +     +P P+     +++D  LAF           L  +E +D+    I+D G
Sbjct: 43  FGKRLWICPSW-KPVPDENAVNVMLDPGLAFGTGTHPTTALCLTWLEGQDLRDKVIIDFG 101

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G+G + +A LK     + +G+DI  +A+  ++ NA  NGVS++ +   +D   +     
Sbjct: 102 CGSGILAIAALKLGAK-RVIGIDIDPQAITASRDNATRNGVSDQLELYLADDLPN-GIQA 159

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL-NKDGLCS 224
           DV+V+N   I +  +  L  ++       +L      L+    + D     L        
Sbjct: 160 DVLVAN---ILAGPLRQLSTQI------EALVKDQGSLALSGILEDQAPELLDVYGQWFV 210

Query: 225 V 225
           +
Sbjct: 211 M 211


>gi|328948517|ref|YP_004365854.1| hypothetical protein Tresu_1660 [Treponema succinifaciens DSM 2489]
 gi|328448841|gb|AEB14557.1| protein of unknown function Met10 [Treponema succinifaciens DSM
           2489]
          Length = 415

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  T TGA  L  +K     + V VDIS +A+++ + N   NG  E+   + +D
Sbjct: 240 HGKKVLDTFTHTGAFGLNAVKAGAR-EVVSVDISQEAVDMVEKNISLNGAEEKMKAVCAD 298

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  ++        FDVI+ +PP   +     +              GG      Y+ I 
Sbjct: 299 VFDLLKQYEASGEKFDVIILDPPAF-TKKAGKIEKAY----------GG------YKEIN 341

Query: 211 DGVSRHLNKDGLCS 224
               R LN+ G+  
Sbjct: 342 LRAMRILNEGGILV 355


>gi|300813871|ref|ZP_07094176.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300512058|gb|EFK39253.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 229

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 19/126 (15%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R LDLG G G + L ++      +   +D + ++LE+ K     N + ++   +Q D  +
Sbjct: 38  RALDLGCGNGIISLRIVDRFK--ELYAIDYNNESLELFKIALKENYLEDKIRLIQDDILN 95

Query: 160 ----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    FD I+ NPPY           + R               +  R   + VS+
Sbjct: 96  LGNYFPNNYFDQILFNPPYFNCFEPKSNMEKARHS-------------TDIRNFIEIVSK 142

Query: 216 HLNKDG 221
            L   G
Sbjct: 143 LLKARG 148


>gi|291521011|emb|CBK79304.1| 23S rRNA m(5)U-1939 methyltransferase [Coprococcus catus GD/7]
          Length = 463

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     ++  +S+ +F    +T  L  +     +   I     + + DL +GT
Sbjct: 273 LYGQDYFYEHILGLKFKISTFSFF---QTNTLGAELLYDIARSYIGDTKDMTVFDLYSGT 329

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLF 165
           G +   L   +   K VGV+I  +A+E AK NA  N + +  + +  D      ++E   
Sbjct: 330 GTIAQILAAVAK--KVVGVEIVEEAVEAAKVNAGLNQL-DNCEFIAGDVLKVLDTIEDKP 386

Query: 166 DVIVSNPP 173
           D IV +PP
Sbjct: 387 DYIVLDPP 394


>gi|290476761|ref|YP_003469672.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           bovienii SS-2004]
 gi|289176105|emb|CBJ82910.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           bovienii SS-2004]
          Length = 293

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGNRLWICPSWREVPEPDAVNVMLDPGLAFGTGTHPTTSLCLQWLDGLDLTGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     + +G+DI  +A++ ++ NA  NGVS +     S      +   D
Sbjct: 168 GSGILAIAALKLGAK-QAIGIDIDPQAIQASRDNAERNGVSAQLTLYLSKN-QPADLKCD 225

Query: 167 VIVSN 171
           ++++N
Sbjct: 226 IVIAN 230


>gi|229495591|ref|ZP_04389324.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317574|gb|EEN83474.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 184

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 35/179 (19%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            + + R  +    F+ RP T+ L   AL  ++  +   +  RILDL  GTG++ L     
Sbjct: 7   KYGHRRFDVPKG-FKLRPTTD-LAKEALFSTITSMFSYEGARILDLFAGTGSIGLEFASR 64

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDVIVSN 171
              +    V+   K +   +S        E       + F  +          +D+I ++
Sbjct: 65  GAEW-VDMVEKQPKQVAFIQSVIKALHAEEEATVHVGNVFKWLTPETGSSSTPYDLIFAD 123

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PPY    +V           P++    G                 L  +GL  +E    
Sbjct: 124 PPYALEALVKL---------PQLVFSSG----------------LLAPEGLFILEHPET 157


>gi|329851870|ref|ZP_08266551.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Asticcacaulis biprosthecum C19]
 gi|328839719|gb|EGF89292.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Asticcacaulis biprosthecum C19]
          Length = 405

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 22/175 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ +    +L++G G G        E    +  G+ IS    + A       G+S++ D 
Sbjct: 184 VDLKPGQHVLEIGCGWGGFA-QYAAEVIGARVTGLTISPAQRDYAIERMERLGLSDKVDI 242

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL--------- 203
              D +  VEG +D +VS   +             +  D      GG  GL         
Sbjct: 243 QLKD-YRDVEGQYDAVVSIEMFEAVGEAYWKTYFNKLHDVLK--TGGKAGLQVITIADEI 299

Query: 204 -SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGND 257
              YRT AD + +++   G+            +V    +  L +++ F+   G+D
Sbjct: 300 FEDYRTRADFIQKYVFPGGML------PSAQKLVEQTRAAGLKMLSDFQ--FGHD 346


>gi|284048740|ref|YP_003399079.1| methyltransferase [Acidaminococcus fermentans DSM 20731]
 gi|283952961|gb|ADB47764.1| methyltransferase [Acidaminococcus fermentans DSM 20731]
          Length = 184

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 42/182 (23%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G      ++L ++   +  RP  + + ++       RI       +LD   GTG + L
Sbjct: 4   ITGKA--RGLKL-VTPKNYLVRPTADRVKEALFNIIQSRI---PGSTVLDAFAGTGNLGL 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDV 167
                    + V  D S ++L++ K+N       E+ + + +D        +     FD+
Sbjct: 58  E-AWSRGAEQVVYFDKSRESLKLVKANVEKARAGEQVNMIHTDAVNGLAMMAQQGKTFDL 116

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH--LNKDGLCSV 225
           I S+PPY                           GL+  R + + + +   L   GL  +
Sbjct: 117 IFSDPPY-------------------------NKGLN--RKVVEALEKWPVLKPGGLLVL 149

Query: 226 EI 227
           E 
Sbjct: 150 EH 151


>gi|114046682|ref|YP_737232.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella sp. MR-7]
 gi|113888124|gb|ABI42175.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Shewanella sp. MR-7]
          Length = 463

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 28/166 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +A +L  +  +   RILDL  G G   L L K     + +GV+   + +  A+ NA  
Sbjct: 304 AMVAQALDWLAPQPGERILDLFCGMGNFSLPLAKL--GAEVIGVEGVPEMVSQARENAAA 361

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           NG+S        D  + +        S  P++  +    L           +  G  + L
Sbjct: 362 NGLS-NLTFYHGDLSADL--------SCEPWMGKIDKLLLDP---------ARAGAFESL 403

Query: 204 SHYRTI-------ADGVSRHLNKDGLCSVEIGYN-QKVDVVRIFES 241
              + +              L +D    +E GY  QK+ ++ +F  
Sbjct: 404 QWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQ 449


>gi|163845942|ref|YP_001633986.1| putative RNA methylase [Chloroflexus aurantiacus J-10-fl]
 gi|222523667|ref|YP_002568137.1| putative RNA methylase [Chloroflexus sp. Y-400-fl]
 gi|163667231|gb|ABY33597.1| putative RNA methylase [Chloroflexus aurantiacus J-10-fl]
 gi|222447546|gb|ACM51812.1| putative RNA methylase [Chloroflexus sp. Y-400-fl]
          Length = 342

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 30/217 (13%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-----EKRDVVRILDLGTGTGAVC 112
           R  ++V + L+      R       + AL   +        +     R+L++G G+G + 
Sbjct: 144 RSGWDVLVRLTPRPLATRSWRVCNREGALNGPVAHAMAVLSKPHAGDRVLNVGCGSGTLL 203

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVS 170
           +  L  +   + +G D    AL  A  N    G+S+R +    D           DV+++
Sbjct: 204 IERLLITTAAQAIGCDTDPTALACAWRNLGAAGLSKRVELYDWDACQLPLPSASIDVVLA 263

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           + P+   V                        L+ Y  +    +R     G   +    +
Sbjct: 264 DLPFGHLVGSHTTN------------------LTLYPALLAEAARVTRPGGRAVLI--SH 303

Query: 231 QKVDVVRIFESRKLFLV--NAFKDYGGN-DRVLLFCR 264
           +   + R   +   + V      D GG   R+ +  R
Sbjct: 304 EVRLMERSLATLPQWRVDQQLRVDLGGLYPRIFVLRR 340


>gi|302689777|ref|XP_003034568.1| CFS1-like protein [Schizophyllum commune H4-8]
 gi|300108263|gb|EFI99665.1| CFS1-like protein [Schizophyllum commune H4-8]
          Length = 456

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 75  RPETELLVDSALAFSLPRIEKR---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + E+  L ++ L      IEK       R+L++G+G G++ + + K  P      + +S 
Sbjct: 179 QEESNELYEAQLRKLDHVIEKARIWPGNRVLEIGSGWGSMAIRIAKTVPGTTIDTITLSS 238

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVS 170
           + L +AK    T G+S R      D+       E  FD +VS
Sbjct: 239 QQLVLAKERIATAGLSHRIRVHLMDYRDMPLEWEHAFDRVVS 280


>gi|289665492|ref|ZP_06487073.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 355

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 49/165 (29%), Gaps = 27/165 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L   P  K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCP--K 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 230 VTTLDLYEAEARALTLARRNLQDITHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D                         +      ++ L   G   +
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLLL 314


>gi|251793183|ref|YP_003007911.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534578|gb|ACS97824.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 294

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 158 KGKTVIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSD 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DKPSDLKADVVVAN 230


>gi|315918150|ref|ZP_07914390.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692025|gb|EFS28860.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 313

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     ++   +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 164 LCVDLMEEGIQEGETVLDVGTGSGILMI-VAEKLGAGFVCGVDIDELAVEVANENLELNK 222

Query: 146 VS-ERFDTLQSDWFSSVEGL-FDVIVSN 171
           VS E++  L  +    +E   +DV+V+N
Sbjct: 223 VSKEKYKVLHGNLIEKIEKQSYDVVVAN 250


>gi|317058263|ref|ZP_07922748.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313683939|gb|EFS20774.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 313

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     ++   +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 164 LCVDLMEEGIQEGETVLDVGTGSGILMI-VAEKLGAGFVCGVDIDELAVEVANENLELNK 222

Query: 146 VS-ERFDTLQSDWFSSVEGL-FDVIVSN 171
           VS E++  L  +    +E   +DV+V+N
Sbjct: 223 VSKEKYKVLHGNLIEKIEKQSYDVVVAN 250


>gi|302519697|ref|ZP_07272039.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SPB78]
 gi|302428592|gb|EFL00408.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SPB78]
          Length = 437

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ R   R+LD+G G G++ L   +E    + VGV +S +    A+      G
Sbjct: 193 LDLIATKLDLRPGQRLLDVGCGWGSMALHAAREY-GVEVVGVTLSREQAAYARKRVAEEG 251

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++ +    D+    +G FD I S            +   V              G + 
Sbjct: 252 LGDKVEIRVQDYRDVRDGPFDAISS----------IGMAEHV--------------GSAR 287

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 288 YEEYAHDLYALLKPGGRLL 306


>gi|257467012|ref|ZP_05631323.1| ribosomal protein L11 methyltransferase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 309

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     ++   +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 160 LCVDLMEEGIQEGETVLDVGTGSGILMI-VAEKLGAGFVCGVDIDELAVEVANENLELNK 218

Query: 146 VS-ERFDTLQSDWFSSVEGL-FDVIVSN 171
           VS E++  L  +    +E   +DV+V+N
Sbjct: 219 VSKEKYKVLHGNLIEKIEKQSYDVVVAN 246


>gi|257451704|ref|ZP_05617003.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 309

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     ++   +LD+GTG+G + + + ++       GVDI   A+E+A  N   N 
Sbjct: 160 LCVDLMEEGIQEGETVLDVGTGSGILMI-VAEKLGAGFVCGVDIDELAVEVANENLELNK 218

Query: 146 VS-ERFDTLQSDWFSSVEGL-FDVIVSN 171
           VS E++  L  +    +E   +DV+V+N
Sbjct: 219 VSKEKYKVLHGNLIEKIEKQSYDVVVAN 246


>gi|255712725|ref|XP_002552645.1| KLTH0C09812p [Lachancea thermotolerans]
 gi|238934024|emb|CAR22207.1| KLTH0C09812p [Lachancea thermotolerans]
          Length = 306

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 34/170 (20%)

Query: 64  RLTLSSDTFEPRPETELL--------VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +     DT+ P    +          ++  L   +    ++   R+LD+G G G +  +L
Sbjct: 77  QFKAGPDTYVPGFNYKEHLPARVSTAIEQELDQDVRSQLQKHKYRVLDIGCGGGILTESL 136

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
            +     K  GVD++ + +E+A+ +A  + + +     Q      V   +D++       
Sbjct: 137 ARMPFVSKVDGVDLTPECIEVARGHAEKDPLVKNKLNYQLVPLEDVTENYDLVTC----- 191

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               ++ L    +  +                 I       LN+ G+  +
Sbjct: 192 ----MEMLEHVDQPSE-----------------ILRHAWNRLNRGGVLFL 220


>gi|170077427|ref|YP_001734065.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
 gi|169885096|gb|ACA98809.1| SAM dependent methyltransferase [Synechococcus sp. PCC 7002]
          Length = 222

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+   A  +     ++   +LDLGTGT  + + L ++ P ++  G D++   L + + N 
Sbjct: 29  VNQDFADLVVTTYSQETAFVLDLGTGTAQIPILLGQQRPQWQIKGTDLAQSMLALGQKNV 88

Query: 142 VTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           V  G++ + + + +D       +  FDVI+SN
Sbjct: 89  VAAGLTAQIELVYADAKNLPWPDQSFDVIISN 120


>gi|91228891|ref|ZP_01262793.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus
           12G01]
 gi|91187556|gb|EAS73886.1| ribosomal protein L11 methyltransferase [Vibrio alginolyticus
           12G01]
          Length = 295

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 72/196 (36%), Gaps = 46/196 (23%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +               
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADKLEV-------------- 213

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     + L  +V   +       G       R +A  +   +  +G  ++ 
Sbjct: 214 -------YLPQNQPEGLVADVVVANIL----AGP-----LRELAPIIKGLVKPNGDLAMS 257

Query: 226 EIGYNQKVDVVRIFES 241
            +   Q  DV   +  
Sbjct: 258 GVLDTQAEDVANYYRD 273


>gi|318062502|ref|ZP_07981223.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SA3_actG]
 gi|318079031|ref|ZP_07986363.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SA3_actF]
          Length = 434

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ R   R+LD+G G G++ L   +E    + VGV +S +    A+      G
Sbjct: 190 LDLIATKLDLRPGQRLLDVGCGWGSMALHAAREY-GVEVVGVTLSREQAAYARKRVAEEG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++ +    D+    +G FD I S            +   V              G + 
Sbjct: 249 LGDKVEIRVQDYRDVRDGPFDAISS----------IGMAEHV--------------GSAR 284

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 285 YEEYAHDLYALLKPGGRLL 303


>gi|291391706|ref|XP_002712321.1| PREDICTED: methyltransferase like 5 [Oryctolagus cuniculus]
          Length = 209

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNVEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NVDMVQCDVCTLPNRMPKSFDTVIMNPPF 129


>gi|291302742|ref|YP_003514020.1| methyltransferase type 12 [Stackebrandtia nassauensis DSM 44728]
 gi|290571962|gb|ADD44927.1| Methyltransferase type 12 [Stackebrandtia nassauensis DSM 44728]
          Length = 214

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 59/168 (35%), Gaps = 39/168 (23%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+  R       +  RP   +LVD+            +   +LDLG G G   + L   S
Sbjct: 16  FWEERYRSRDRVWSGRPNP-VLVDTVADV--------EPGTVLDLGCGEGGDAVWLA--S 64

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             ++   VDIS  A+     NA   GV +R    + D   +  +G FD+I +   +++S 
Sbjct: 65  KGWRVTSVDISGTAIARTLDNAKAAGVGDRVRGERHDLAETFPDGAFDLISAQ--FLQSP 122

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSV 225
                                   L   R +     +  LN  GL  +
Sbjct: 123 ------------------------LEFPRELVLRRAAHALNPGGLLLI 146


>gi|227512910|ref|ZP_03942959.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           buchneri ATCC 11577]
 gi|227083910|gb|EEI19222.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           buchneri ATCC 11577]
          Length = 456

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 68/189 (35%), Gaps = 27/189 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S ++F      +   +     ++ + +      ++D   G G + L+L K   
Sbjct: 273 MGLDFEISPNSFYQVNPIQT--EKLYKLAIQKAQLNKDDIVIDAYCGIGTISLSLAKVVK 330

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPPYI 175
             K  GV+I  +A+E AK NA  N +S     +     Q   +       DVIV +PP  
Sbjct: 331 --KVYGVEIVPEAIEDAKRNAHINKISNCKFVVAKAEEQLGKWQKAGLKPDVIVVDPP-- 386

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGY--NQK 232
              + + L   V +  P+             R I        L +D     E GY  NQ 
Sbjct: 387 RKGLDESLIESVAEMSPQ-------------RLIYVSCNPATLARDAKLFAEHGYQINQP 433

Query: 233 VDVVRIFES 241
           +  V  F  
Sbjct: 434 IQPVDQFPQ 442


>gi|212696291|ref|ZP_03304419.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676920|gb|EEB36527.1| hypothetical protein ANHYDRO_00828 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 233

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 22/177 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  +++K   +  +D+G G G + LA L      K  G++I  K  EI   N 
Sbjct: 25  IDSILLANFSKMKKNKTL--IDIGAGNGILSLACLSYYNLSKVYGIEIQEKKAEIFNENL 82

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLE---VRDFDPRISLD 197
             N ++      +    ++    F D I++NPPY +         E   +   + +++L 
Sbjct: 83  KLNSINNIEIINKDLNLTNFPNNFCDYIITNPPYYKKGANIRNDKEEFLLSRQEIKMNLA 142

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFK 251
                      I    ++ L   G   +     +   +V I +      L  +   +
Sbjct: 143 ----------DIFSFSNKTLKDKGRLFMIH---KPERLVDIIKESGNLKLKRIKFVQ 186


>gi|16800576|ref|NP_470844.1| ribosomal protein L11 methyltransferase [Listeria innocua
           Clip11262]
 gi|38605416|sp|Q92BP0|PRMA_LISIN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|16413981|emb|CAC96739.1| lin1508 [Listeria innocua Clip11262]
          Length = 314

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 63/222 (28%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDELIDVGTGSGVLSIASAKLGAKS-ILATDLDEIATRAAEENIRLNKTENIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++    +     D++V+N        V  L  E                   Y+      
Sbjct: 231 NNLLQDINKSDVDIVVAN----ILAEVILLFPE-----------------DVYKA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|325273728|ref|ZP_08139928.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51]
 gi|324101148|gb|EGB98794.1| SAM-dependent methyltransferase [Pseudomonas sp. TJI-51]
          Length = 398

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG+ E+   ++ D
Sbjct: 220 KGKRVLDLFSYIGGWGVQ-AGAFGASEVFCVDASGFALDGVERNAALNGIGEKLTCIEGD 278

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F ++      E  FDVI+++PP       D                   +G + YR + 
Sbjct: 279 VFEALRELKAAEERFDVIIADPPAFIKRKKDL-----------------KNGEAAYRRLN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R L+KDG+  
Sbjct: 322 EQAMRMLSKDGILV 335


>gi|288817382|ref|YP_003431729.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus
           TK-6]
 gi|288786781|dbj|BAI68528.1| SAM dependent methyl transferase [Hydrogenobacter thermophilus
           TK-6]
 gi|308750989|gb|ADO44472.1| Methyltransferase type 11 [Hydrogenobacter thermophilus TK-6]
          Length = 391

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A S+ R   +   R LDL   TG   L + K     + + VDIS +ALE+AK NA 
Sbjct: 203 DQRKARSMIRQLVKPGYRCLDLFCHTGGFALNMRKAGAG-EVLAVDISAQALEVAKRNAE 261

Query: 143 TNGVSERFDTLQSDWFSSVEGL------FDVIVSNPP 173
            N + +    ++ + F  +  L      FD+++ +PP
Sbjct: 262 LNSL-DNIVWMEENAFDFMRKLHKEGQVFDLVLMDPP 297


>gi|283856283|ref|YP_162305.2| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|283775279|gb|AAV89194.2| ribosomal L11 methyltransferase [Zymomonas mobilis subsp. mobilis
           ZM4]
          Length = 325

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 38/178 (21%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
             +   ++   + D+GTGTG +  A        + +  DI   A+E+AK NAV N V   
Sbjct: 168 RMKKAGQNFHNVADIGTGTGLLAFAARHLWHSARVIASDIDPVAVEVAKENAVVNHVPLG 227

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               Q +   +       +    PY      D L   +           G         +
Sbjct: 228 MGCRQVEMVVAAGMDNRQLKRRAPY------DLLIANIL---------AGP--------L 264

Query: 210 ADGVSRH---LNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFKDYGGNDRVLLF 262
            +        L + G   +  G    Q+  V R +++  + L          DRV+L 
Sbjct: 265 IELAPSFVPALQEGGSLIL-AGLVAEQEQAVCRAYKNLGMRLA---------DRVVLG 312


>gi|262066696|ref|ZP_06026308.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379495|gb|EFE87013.1| ribosomal protein L11 methyltransferase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 311

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      I+D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 160 LLLKLMEEQDFTNKTIIDIGTGSGILMIA-GKLLGAGEVYGTDIDEFSMEVAKENLLLNN 218

Query: 146 VS-ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +S +    L+ +    +E   FD++V N                      ++        
Sbjct: 219 ISLDEVKLLKGNLLEVIENKKFDIVVCN---------------------ILA-------- 249

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKD 252
                + D +   L +D +     I  ++  +V+   ES  L +    +D
Sbjct: 250 DVLIKLLDEIKYILKEDSIVLFSGIIEDKLAEVISKAESVGLEVAEIKED 299


>gi|149184379|ref|ZP_01862697.1| Cyclopropane-fatty-acyl-phospholipid synthase [Erythrobacter sp.
           SD-21]
 gi|148831699|gb|EDL50132.1| Cyclopropane-fatty-acyl-phospholipid synthase [Erythrobacter sp.
           SD-21]
          Length = 441

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A    ++  +   RILD+G G G   L L +     +  GV ++   +   K  A   GV
Sbjct: 182 AHLAAKMYIQPGQRILDIGCGWGGFALYLARHY-DVEVHGVALAPDQIAFCKERAEEAGV 240

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
           ++R     +D +  V G FD I S
Sbjct: 241 ADRVKFSLTD-YRDVTGQFDRISS 263


>gi|16272916|ref|NP_439141.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae Rd
           KW20]
 gi|1172623|sp|P44402|PRMA_HAEIN RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|1574006|gb|AAC22638.1| ribosomal protein L11 methyltransferase (prmA) [Haemophilus
           influenzae Rd KW20]
          Length = 296

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 163 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDE-KP 220

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 221 SDLKADVVVAN 231


>gi|259486612|tpe|CBF84602.1| TPA: methyltransferase LaeA-like, putative (AFU_orthologue;
           AFUA_8G01930) [Aspergillus nidulans FGSC A4]
          Length = 330

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 46/144 (31%), Gaps = 39/144 (27%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L R   ++  R+LD+GTGTG   +    E P  + +G D+S             + 
Sbjct: 85  LKGELHRAPVKNPARVLDIGTGTGIWAIDFADEHPETEVIGNDLSP---------IQPSW 135

Query: 146 V--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V  + RF+    +   S    FD I              L   +RD D            
Sbjct: 136 VPPNCRFEVDDFEQIWSYSQPFDFI----------HGRELEGAIRDHD------------ 173

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI 227
                +     + L   G    EI
Sbjct: 174 ----HVFSEAFKSLKPGGW--FEI 191


>gi|302340006|ref|YP_003805212.1| methyltransferase type 12 [Spirochaeta smaragdinae DSM 11293]
 gi|301637191|gb|ADK82618.1| Methyltransferase type 12 [Spirochaeta smaragdinae DSM 11293]
          Length = 382

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +     +    ++   RILDLG G+G + LAL +  P  +    + S     +A+ N  T
Sbjct: 197 AVCENIVRLFPEKGPDRILDLGGGSGMIALALARHYPSCRCFLFE-SPDVAVVARKNIET 255

Query: 144 NGVS---ERFDTLQSDWFSSVEG-LFDVIVS 170
                   R + L  D+ S   G  +D+I++
Sbjct: 256 YAKEPQGNRPEILAGDYLSDDIGTQYDLIIA 286


>gi|283778024|ref|YP_003368779.1| methyltransferase small [Pirellula staleyi DSM 6068]
 gi|283436477|gb|ADB14919.1| methyltransferase small [Pirellula staleyi DSM 6068]
          Length = 434

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 24/131 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+   TG   +   +     + +GVD S +A+  A+ NA  NG++        D F 
Sbjct: 248 KVLDMFCYTGGFAMNASRHGQAAEVLGVDTSKRAVAQAQKNAEINGLT-NVTFEAGDGFQ 306

Query: 160 SVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           S+E        FD IV +PP                             +  Y  +    
Sbjct: 307 SLEKFATEGRKFDAIVLDPPKFARSRSQVDQA-----------------IQAYHRLNRAA 349

Query: 214 SRHLNKDGLCS 224
              L   G+  
Sbjct: 350 VALLPPGGILV 360


>gi|21107539|gb|AAM36246.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 450

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 207 LERICQKLRLAPHHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELANQRIAAAG 265

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 266 LSDRVTVLLRD-YRDLEGRFDRVVS 289


>gi|319897511|ref|YP_004135708.1| ribosomal protein l11 methyltransferase [Haemophilus influenzae
           F3031]
 gi|317433017|emb|CBY81388.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           F3031]
          Length = 294

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSDE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|297587406|ref|ZP_06946051.1| 23S rRNA (uracil-5-)-methyltransferase [Finegoldia magna ATCC
           53516]
 gi|297575387|gb|EFH94106.1| 23S rRNA (uracil-5-)-methyltransferase [Finegoldia magna ATCC
           53516]
          Length = 442

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 62  NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +S    F+P P      +     +L          + DL  GTG +     K++ 
Sbjct: 266 GLEFRISPFSFFQPNPAQA---EQIYNRALELAGDLSGKNVYDLYCGTGTIAQIFAKKAE 322

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
               +GV+I  +A+E A+ NA  NG++   + +  D  + +E     DV+V +PP
Sbjct: 323 --SVIGVEIVAEAVEKAQENAELNGLTNT-EFICDDCLNFMEKVEKKDVVVLDPP 374


>gi|290893317|ref|ZP_06556303.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J2-071]
 gi|290557125|gb|EFD90653.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J2-071]
          Length = 189

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 34/134 (25%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K    ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    ++
Sbjct: 29  KETSKKLLDVGAGTGSVGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGL-ENVAVIE 87

Query: 155 SDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIAD 211
           +     +     FD I                             GG  G L+    I D
Sbjct: 88  AYAPIELPEKETFDAI---------------------------FIGGSGGNLTD---IID 117

Query: 212 GVSRHLNKDGLCSV 225
               HLN  G   +
Sbjct: 118 WSLAHLNPGGSLVL 131


>gi|254464677|ref|ZP_05078088.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacterales
           bacterium Y4I]
 gi|206685585|gb|EDZ46067.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacterales
           bacterium Y4I]
          Length = 401

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 35  RFFLTNAIVRSLK-HESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAF 88
           RF+L     R  K + S H  LG  +FY + L    T SS  F+   ++     +A  A 
Sbjct: 118 RFWLHRNHRRQAKKNISYHYDLGN-EFYGLWLDDTMTYSSALFQSGQDSLEKAQTAKYAS 176

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            + ++  +    +L++G G G        +    +  G+ IS + L  A+      G+S+
Sbjct: 177 MVDQMGVKPGDHVLEIGCGWGGFAEYAAGQR-GLRVTGLTISKEQLRFARERLEKAGLSD 235

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           R +    D +    G FD I S
Sbjct: 236 RVELRLQD-YRDCRGQFDGIAS 256


>gi|183597992|ref|ZP_02959485.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827]
 gi|188022766|gb|EDU60806.1| hypothetical protein PROSTU_01343 [Providencia stuartii ATCC 25827]
          Length = 294

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A+  ++ NA  NGVSER       
Sbjct: 158 EGKTVIDFGCGSGILAIA-ALKLGAAQAIGIDIDPQAIIASRDNAERNGVSERLSLYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 217 -DQPKELQADVVVAN 230


>gi|325106620|ref|YP_004267688.1| methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
 gi|324966888|gb|ADY57666.1| Methyltransferase type 11 [Planctomyces brasiliensis DSM 5305]
          Length = 423

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 19/130 (14%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++LDL   +G   L   +     +  GVD+   A+ +A++NA  N  +++   + +D 
Sbjct: 249 GAKVLDLCCYSGGFSLQADRLGGAEEVTGVDLDEAAVAMARNNAKLN--NQKVKFVHADV 306

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGGID-GLSHYRTIADGVS 214
           F              PY+  ++ +    +V   DP   I+  G  D G   Y  +     
Sbjct: 307 F--------------PYMRDMLRNGNTYDVVILDPPKLINTRGEYDEGRKKYFDLNRLAC 352

Query: 215 RHLNKDGLCS 224
           + +   GL  
Sbjct: 353 QLVKPGGLLL 362


>gi|290959840|ref|YP_003491022.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces scabiei
           87.22]
 gi|260649366|emb|CBG72481.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces scabiei
           87.22]
          Length = 431

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 65/173 (37%), Gaps = 34/173 (19%)

Query: 59  DFYNVRL---TLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAV 111
           DFY + L    + S  + P P+  L  ++A    L  + ++      +R+LD+G G G++
Sbjct: 155 DFYEIVLGPSMVYSCAYWPAPDATL--EAAQHDKLDLVCRKLALAPGMRLLDVGCGWGSL 212

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            +   +E      VGV +S +    A+      G+++R +    D+   V+G +D I S 
Sbjct: 213 AVHAAREY-GVHVVGVTLSQEQAAYARKRVADEGLTDRVEIRVQDYRDVVDGPYDAISS- 270

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                      +   V              G   Y   A  + R L   G   
Sbjct: 271 ---------IGMAEHV--------------GADRYLEYARDLYRLLAPGGRLL 300


>gi|227826521|ref|YP_002828300.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           M.14.25]
 gi|227829129|ref|YP_002830908.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           L.S.2.15]
 gi|229577930|ref|YP_002836328.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           Y.G.57.14]
 gi|229583683|ref|YP_002842184.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           M.16.27]
 gi|238618591|ref|YP_002913416.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           M.16.4]
 gi|284996515|ref|YP_003418282.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus L.D.8.5]
 gi|259585588|sp|C3N0H8|CBIT_SULIA RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|259585589|sp|C4KJM8|CBIT_SULIK RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|259585590|sp|C3MJI5|CBIT_SULIL RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|259585804|sp|C3MTW8|CBIT_SULIM RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|259585831|sp|C3N8G6|CBIT_SULIY RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|227455576|gb|ACP34263.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus L.S.2.15]
 gi|227458316|gb|ACP37002.1| precorrin-6Y C5,15-methyltransferase(decarboxylating), CbiT subunit
           [Sulfolobus islandicus M.14.25]
 gi|228008644|gb|ACP44406.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus Y.G.57.14]
 gi|228018732|gb|ACP54139.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus M.16.27]
 gi|238379660|gb|ACR40748.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus M.16.4]
 gi|284444410|gb|ADB85912.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Sulfolobus islandicus L.D.8.5]
 gi|323473598|gb|ADX84204.1| precorrin-6Y C5,15-methyltransferase(decarboxylating), CbiT subunit
           [Sulfolobus islandicus REY15A]
 gi|323476245|gb|ADX81483.1| precorrin-6Y C5,15-methyltransferase(decarboxylating), CbiT subunit
           [Sulfolobus islandicus HVE10/4]
          Length = 199

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 33/147 (22%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   A +L ++  R    ILD+G GTG+V + A L      K  GVD   KA+ + + NA
Sbjct: 26  EEIRALALSKLRIRKGDMILDIGCGTGSVTVEASLLVGSTGKVYGVDKEEKAINLTRRNA 85

Query: 142 VTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              GV      ++    +   ++   FD I                             G
Sbjct: 86  EKFGVLNNIVLIKGEAPEILFTINEKFDRI---------------------------FIG 118

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
           G  G    + I       + K G   +
Sbjct: 119 G--GSEKIKEIISASWEIIKKGGRVVI 143


>gi|229580830|ref|YP_002839229.1| cobalt-precorrin-6Y C(15)-methyltransferase [Sulfolobus islandicus
           Y.N.15.51]
 gi|259585830|sp|C3NJQ5|CBIT_SULIN RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|228011546|gb|ACP47307.1| precorrin-6Y C5,15-methyltransferase(decarboxylating), CbiT subunit
           [Sulfolobus islandicus Y.N.15.51]
          Length = 199

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 50/147 (34%), Gaps = 33/147 (22%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNA 141
           +   A +L ++  R    ILD+G GTG+V + A L      K  GVD   KA+ + + NA
Sbjct: 26  EEIRALALSKLRIRKGDMILDIGCGTGSVTVEASLLVGSTGKVYGVDKEEKAINLTRRNA 85

Query: 142 VTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
              GV      ++    +   ++   FD I                             G
Sbjct: 86  EKFGVLNNIVLIKGEAPEILFTINEKFDRI---------------------------FIG 118

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV 225
           G  G    + I       + K G   +
Sbjct: 119 G--GSEKIKEIISASWEIIKKGGRVVI 143


>gi|94499740|ref|ZP_01306276.1| hypothetical protein RED65_14502 [Oceanobacter sp. RED65]
 gi|94427941|gb|EAT12915.1| hypothetical protein RED65_14502 [Oceanobacter sp. RED65]
          Length = 397

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 31/138 (22%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
            GW  FY+ RL         R     LV                 R+LD+ +  G   + 
Sbjct: 201 TGW--FYDHRLN--------RQRVNQLV--------------KGKRVLDICSYIGGWGVQ 236

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS------SVEGLFDVI 168
                   + V VD S +AL+  K NA  NGV+E+  T++ D F         +  FDV+
Sbjct: 237 AAHHGA-AEVVCVDASQQALDWVKHNAELNGVAEKVSTIKGDAFKVMEQLQEQQEQFDVV 295

Query: 169 VSNPPYIESVIVDCLGLE 186
           + +PP       D    E
Sbjct: 296 ILDPPAFIPKRKDIGPGE 313


>gi|6572617|gb|AAF17323.1|AF139341_1 microcystin synthetase [Microcystis aeruginosa]
          Length = 440

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/256 (19%), Positives = 85/256 (33%), Gaps = 54/256 (21%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 8   SQTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPTAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVAPHC 116

Query: 120 PFFKGVGVDISCKALE-IAKSNAVTNGV-SERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
             +   G DIS  AL+ I + N     +   R  T  +D F  +E   FD I+ N     
Sbjct: 117 QHY--WGTDISSVALDHIQRINQEGPKLEQIRLFTRTADNFEGLESEGFDTIILN----- 169

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     V  + P I          +   + +G  + L   G   +        DV 
Sbjct: 170 ---------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GDVR 204

Query: 237 RI-FESRKLFLVNAFK 251
            +         V  +K
Sbjct: 205 NLQLMEAFHADVELYK 220


>gi|86607644|ref|YP_476406.1| cyclopropane fatty acyl phospholipid synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86556186|gb|ABD01143.1| cyclopropane-fatty-acyl-phospholipid synthase [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 379

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 78/210 (37%), Gaps = 40/210 (19%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRP 76
            Q ++  DS L +RQR      I +       H  +G   + D  + R+  S   ++   
Sbjct: 88  TQPLLGLDSCLINRQRGKGAFVIGQR------HYDIGNDLYEDMLDRRMIYSCAYWDGGA 141

Query: 77  ETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           +T      A L     ++E +  +R+LD+G G G     L  E    + VG+ +S +  +
Sbjct: 142 QTLDEAQEAKLDLIARKLELQPGMRVLDIGCGWGGTAQYLA-ERYGVQVVGITVSKEQAK 200

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +A        V  R +      +   +G FD I+S                V  F+    
Sbjct: 201 LASERCRGLPVEIRLED-----YRQTQGKFDRILS----------------VGMFE---- 235

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 G  +YRT      R LN +GL  +
Sbjct: 236 ----HVGYRNYRTFMQVARRLLNDNGLFLL 261


>gi|15675778|ref|NP_269952.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes M1
           GAS]
 gi|71911508|ref|YP_283058.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS5005]
 gi|38605454|sp|Q99XW8|PRMA_STRP1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|13623002|gb|AAK34673.1| putative methyltransferase [Streptococcus pyogenes M1 GAS]
 gi|71854290|gb|AAZ52313.1| ribosomal protein L11 methyltransferase [Streptococcus pyogenes
           MGAS5005]
          Length = 317

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           R    ++D+GTG+G   L++       K     D+   A+ +A+ N   N  ++      
Sbjct: 170 RGGETVIDVGTGSGV--LSIASSLLGAKTIYAYDLDDVAVRVAQDNIDLNQGTDNIHVAA 227

Query: 155 SDWFSSVEGLFDVIVSN 171
            D    V    DVIV+N
Sbjct: 228 GDLLKGVSQEADVIVAN 244


>gi|290581321|ref|YP_003485713.1| putative methyltransferase [Streptococcus mutans NN2025]
 gi|254998220|dbj|BAH88821.1| putative methyltransferase [Streptococcus mutans NN2025]
          Length = 317

 Score = 58.2 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +E       
Sbjct: 170 RGGETVIDVGTGSGVLSVA-SSLLGAKEIFAYDLDDVAVRVAQENIDLNAGTENIHVTAG 228

Query: 156 DWFSSVEGLFDVIVSN 171
           D    V    DVIV+N
Sbjct: 229 DLLKGVAIEADVIVAN 244


>gi|325577786|ref|ZP_08148061.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325160531|gb|EGC72657.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 390

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 13/131 (9%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
             IL    F  + L +    F    +T  L+   L A +   ++   + ++ DL  G G 
Sbjct: 197 QHIL-SESFNGIPLFIRPQGFF---QTNPLIAQGLYATAQDWVQDLPITKLWDLFCGVGG 252

Query: 111 VCLALLKESPF-----FKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS--SVE 162
             L   K          +  G++IS  A++ A  +A   G+ + +F +L +  F+    E
Sbjct: 253 FGLHCAKALQDKHQQEVELTGIEISPSAIQAATLSAQVLGLNNVKFQSLDAANFALTQDE 312

Query: 163 GLFDVIVSNPP 173
              D+++ NPP
Sbjct: 313 NKPDLVIVNPP 323


>gi|319956879|ref|YP_004168142.1| methyltransferase type 11 [Nitratifractor salsuginis DSM 16511]
 gi|319419283|gb|ADV46393.1| Methyltransferase type 11 [Nitratifractor salsuginis DSM 16511]
          Length = 194

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 16/135 (11%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           ++ ++ +   +     PRP          A SL R+        LDL  GTG   LAL +
Sbjct: 6   QEKWDRKYMENPRLRTPRPP---------AKSLERLPAHQPGLALDLACGTGRNTLALAR 56

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVI-VSNPPY 174
               ++   VD+S  AL+I    A  +G+++R  T   D   FS+ E  +D+I ++N  Y
Sbjct: 57  R--GWQVDAVDLSPVALQILTEQAQQSGLADRIRTSMEDLDTFSAPEEHYDLILMTN--Y 112

Query: 175 IESVIVDCLGLEVRD 189
           ++  +++ +   ++ 
Sbjct: 113 LDRELIERIIPALKR 127


>gi|14521594|ref|NP_127070.1| hypothetical protein PAB0923 [Pyrococcus abyssi GE5]
 gi|5458813|emb|CAB50300.1| Putative RNA methylase, UPF0020 family [Pyrococcus abyssi GE5]
          Length = 363

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 30/201 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRP----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++G   F  +  T    +   RP    +    + S++A +L  + + +   I D   G+G
Sbjct: 170 LIGEAFFLGID-TTGDHSLHRRPWRVYDHPAHLKSSIANALIELAQPEGSFI-DPFCGSG 227

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDV 167
            + + L       K + ++   K L  AK NA+  GV ++ + +  D    S      D 
Sbjct: 228 TIPIELALRGYEGKIICLEKYHKHLNGAKMNALAAGVYDKIEFILGDATRLSEYLESVDF 287

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            VSN PY   +    +  E                   Y      +++ L K G+     
Sbjct: 288 AVSNLPYGLKIGRRSMIPE------------------LYSKFLSELAKVLEKRGVFI--- 326

Query: 228 GYNQKVDVVRIFESRKLFLVN 248
              +K  + R  E     +++
Sbjct: 327 -TTEKNAIERAIEENGFKIIH 346


>gi|134294690|ref|YP_001118425.1| ribosomal protein L11 methyltransferase [Burkholderia vietnamiensis
           G4]
 gi|166223402|sp|A4JBD7|PRMA_BURVG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|134137847|gb|ABO53590.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Burkholderia vietnamiensis G4]
          Length = 300

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L ++      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQTVKPGQSVLDYGCGSGILAI-LARKCGADPVIGIDIDPQAVESARQNSERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
                D       +  +G FD++V+N
Sbjct: 212 ---HADVTYGLPDACPDGEFDIVVAN 234


>gi|284033590|ref|YP_003383521.1| trans-aconitate 2-methyltransferase [Kribbella flavida DSM 17836]
 gi|283812883|gb|ADB34722.1| Trans-aconitate 2-methyltransferase [Kribbella flavida DSM 17836]
          Length = 271

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 50/144 (34%), Gaps = 28/144 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  + R+   D   ++DLG G G +   LL   P     GVD S + +  A+       
Sbjct: 23  FADLVRRVGAEDPRTVVDLGCGPGTLTATLLDRWPTATIHGVDSSPEMIAAAEQLRAEPA 82

Query: 146 VSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V++R     +D   +S   G  DVIVSN              E  D              
Sbjct: 83  VADRLTFEVADLRDWSPAPGSIDVIVSN-------ATLQWVPEQLD-------------- 121

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI 227
                +  G  R L   G  +++I
Sbjct: 122 -----LLAGFVRVLKPGGWLAIQI 140


>gi|221632372|ref|YP_002521593.1| 50S ribosomal protein L11 methyltransferase [Thermomicrobium roseum
           DSM 5159]
 gi|221155577|gb|ACM04704.1| ribosomal protein L11 methyltransferase [Thermomicrobium roseum DSM
           5159]
          Length = 306

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 5/98 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
             + +LD G G+G + +A             +I   A E+ + N   NGV++R      D
Sbjct: 165 PGMSVLDAGAGSGILSIA-ALALGARSVTAWEIDPVAGEVLRENLERNGVADRATVRIGD 223

Query: 157 WFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
               +     +D++V+N   +  V+++     VR   P
Sbjct: 224 VTEDLTDREAYDLVVAN--IVARVLIEAGPRLVRAARP 259


>gi|73669145|ref|YP_305160.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72396307|gb|AAZ70580.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 197

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL    L F+  + +  D V+  DLG GTG + +   K     K VG D   KAL+ A+ 
Sbjct: 31  LLAAEILHFAYMQGDLDDSVQ--DLGCGTGILAIG-AKLLGARKVVGYDTDSKALDTARI 87

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY---IESVIVDCLGLEVRDFD 191
           NA    V    + + SD  + ++      V NPP+   ++      L   +R  +
Sbjct: 88  NARKLEVE--IEFVLSDI-ADIKERVKTTVMNPPFGARVKGRDRPFLSSALRTSE 139


>gi|313609225|gb|EFR84894.1| probable cobalt-precorrin-6Y C(15)-methyltransferase
           (decarboxylating) [Listeria monocytogenes FSL F2-208]
          Length = 189

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 34/134 (25%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K    ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    ++
Sbjct: 29  KETSKKLLDVGAGTGSVGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGL-ENVTVIE 87

Query: 155 SDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIAD 211
           +     +     FD I                             GG  G L+    I D
Sbjct: 88  AYAPIELPEKETFDAI---------------------------FIGGSGGNLTD---IID 117

Query: 212 GVSRHLNKDGLCSV 225
               HLN  G   +
Sbjct: 118 WSLAHLNPGGGLVL 131


>gi|255025996|ref|ZP_05297982.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           FSL J2-003]
          Length = 189

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 34/134 (25%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K    ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    ++
Sbjct: 29  KETSKKLLDVGAGTGSVGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGL-ENVTVIE 87

Query: 155 SDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIAD 211
           +     +     FD I                             GG  G L+    I D
Sbjct: 88  AYAPIELPEKETFDAI---------------------------FIGGSGGNLTD---IID 117

Query: 212 GVSRHLNKDGLCSV 225
               HLN  G   +
Sbjct: 118 WSLAHLNPGGGLVL 131


>gi|284028592|ref|YP_003378523.1| type 11 methyltransferase [Kribbella flavida DSM 17836]
 gi|283807885|gb|ADB29724.1| Methyltransferase type 11 [Kribbella flavida DSM 17836]
          Length = 268

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 56/176 (31%), Gaps = 38/176 (21%)

Query: 77  ETELLVDSA--LAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           ET  L + A  LA  L    + +   R+L+ G G GA  + L+  SP  + V  DIS ++
Sbjct: 13  ETRRLAEQAETLADLLHGDTQYEPGSRVLEAGCGVGAQTVQLVTRSPGIELVAADISEES 72

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--D 191
           L  AK          R +    D                PY ++         V +   +
Sbjct: 73  LAQAKQRVAAEAPDARVEWHHGDLRD------------LPYADASFDHLFVCFVLEHLPE 120

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVE--IG----YNQKVDVVRIFE 240
           P  +L                +   L   G    +E   G    + Q      + E
Sbjct: 121 PVAAL--------------RTLRSLLRPGGTITVIEGDHGSALYHPQSPAAQAVIE 162


>gi|220905833|ref|YP_002481144.1| TrmA family RNA methyltransferase [Cyanothece sp. PCC 7425]
 gi|219862444|gb|ACL42783.1| RNA methyltransferase, TrmA family [Cyanothece sp. PCC 7425]
          Length = 457

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 12/133 (9%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +    +        F  +   + S+TF          +  +   L R++ +   RI+D
Sbjct: 264 RCIAGRPVL----TEQFAGLEFEIGSETFF--QVYTEQAERLVQILLERLQLQGTERIVD 317

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSS 160
              G G + L + +++   + +G++I    +  AK NA+ NG++                
Sbjct: 318 AYCGIGTLSLPIARQAQ--QVIGLEIHPATVAQAKQNAIRNGLT-NVSFYAGPVEQQLPQ 374

Query: 161 VEGLFDVIVSNPP 173
           ++ L D++V +PP
Sbjct: 375 LDLLPDIVVLDPP 387


>gi|89901378|ref|YP_523849.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhodoferax
           ferrireducens T118]
 gi|89346115|gb|ABD70318.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Rhodoferax
           ferrireducens T118]
          Length = 217

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 20/150 (13%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD--TFEPRPETELL 81
           + P +VLD      L  A+V+      +        F ++ + L        PR E  +L
Sbjct: 15  IRPWNVLDAEVLELL--AVVKREDFVPLAH--KALAFMDMEIPLGQGQVMLAPRVEARML 70

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
            D+A+         +   ++L++G G+G +   L   +   + + ++I+ +  ++A++N 
Sbjct: 71  QDAAV---------QKHEKVLEIGAGSGYMAALLAHRAQ--RVISLEINPELAQMARANL 119

Query: 142 VTNGVSERFDTLQSDWFSSV--EGLFDVIV 169
              G+    +  Q D    V  +G FDVI+
Sbjct: 120 QKAGI-HNVEVRQFDGAKGVSADGPFDVIM 148


>gi|87300674|ref|ZP_01083516.1| hypothetical protein WH5701_04480 [Synechococcus sp. WH 5701]
 gi|87284545|gb|EAQ76497.1| hypothetical protein WH5701_04480 [Synechococcus sp. WH 5701]
          Length = 373

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 60  FYNVRLTLSSDTFEPRPET--ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + +         F P  +     +++  LA     +  R   RILDLG G G   L    
Sbjct: 155 YDHGVFLYGQGWFGPLNDAPGRTVIEQVLARHHAGLRPR---RILDLGCGAGHSTLPYAA 211

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P  +  G+D+    L  A + A     +  F    ++     +  FD+IVS+      
Sbjct: 212 AFPEAEVWGIDLGASLLRYASARARLLDHAVHFAQQDAERTGFGDRSFDLIVSH------ 265

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +++  +    R                  R +     R L   G+  
Sbjct: 266 ILLHEIPAAAR------------------RRLFAEAHRLLRPQGVMV 294


>gi|315656587|ref|ZP_07909474.1| methyltransferase (methylase) [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315492542|gb|EFU82146.1| methyltransferase (methylase) [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 186

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 34/170 (20%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL +      P  E    V  A+   L          +LDL  G+GA+ L        
Sbjct: 11  GLRLNVPKSGTRPTSER---VREAMFSHLLCSGFPQGATVLDLFAGSGALGLE-ALSRGG 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
              V VD +  A ++ ++N       +R   L  D    V  L     FD+I  +PPY  
Sbjct: 67  ASAVFVDAAGSAAKVLRANIDALRYRDRVRVLVKDAAKFVSELKPTYCFDLIFLDPPY-- 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                 L   V                     I  G++ HL+ +G+  +E
Sbjct: 125 -----ALAPYVLC------------------EILAGLTAHLSPEGIMVLE 151


>gi|304410094|ref|ZP_07391713.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS183]
 gi|307302194|ref|ZP_07581952.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           BA175]
 gi|304351503|gb|EFM15902.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           OS183]
 gi|306914232|gb|EFN44653.1| Cyclopropane-fatty-acyl-phospholipid synthase [Shewanella baltica
           BA175]
          Length = 418

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 64/180 (35%), Gaps = 17/180 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+   + G
Sbjct: 179 LMTICERLDLQPGQTLLEIGTGWGALAIYAAKHY-GVHVTTTTISDAQYAYAKARVESEG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD----PR-----ISL 196
           +S++   L  D + ++ G +D +VS    IE+V  + L    +  +    P       ++
Sbjct: 238 LSDKVTLLTED-YRNLTGEYDRVVS-IEMIEAVGHEYLPSFFKKLESLLKPHGRMLLQAI 295

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                    YR   D + R++   G        V     Q   VV       L      +
Sbjct: 296 TIADQRYDSYRKSVDFIQRYIFPGGCLPSVSQMVGHIAKQTDMVVWSLNDMGLDYAKTLR 355


>gi|301786386|ref|XP_002928615.1| PREDICTED: LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase
           homolog [Ailuropoda melanoleuca]
          Length = 544

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 17/135 (12%)

Query: 50  SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DL 104
               + G    Y     +++ +S D F    +        L  ++  +   +   IL D+
Sbjct: 335 PYQLLFGEPHLYEDLLGLKIRISPDAFF---QINTAGAEVLYRTVGELSGVNSNTILLDI 391

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWF 158
             GTG + L+L + +   + +G+++  +A++ A+  A  NG++       R + +     
Sbjct: 392 CCGTGVIGLSLAQYA--SQVLGIELVEQAVQNARXTAAFNGITNCEFHAGRAEKILPQLL 449

Query: 159 SSVE-GLFDVIVSNP 172
            S E G F V V NP
Sbjct: 450 KSKEDGQFIVAVVNP 464


>gi|296412617|ref|XP_002836019.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629819|emb|CAZ80176.1| unnamed protein product [Tuber melanosporum]
          Length = 377

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 58/166 (34%), Gaps = 26/166 (15%)

Query: 57  WRDFYNVRLTLSSDTFEP------RPETELLVDSALAF--SLPRIEKRDVVRI--LDLGT 106
            RDF  + L L SD   P      R    L +   L    +L   E      +  LD+GT
Sbjct: 21  HRDF-GLNLALPSDRLCPTVPNRFRLNYVLWIQDLLDSTGNLENDEFDSTREVVGLDVGT 79

Query: 107 GTGAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-----VSERFDTLQSDWFS 159
           G   +   L        +K +  DI  K+LE A+ N   N      + ER   L +    
Sbjct: 80  GASCIYPLLGCAL-RDGWKFIATDIDGKSLEYARENVRRNKEKVGDLDERIMVLDNSPDD 138

Query: 160 SVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            +         + D  + NPP+  S+         +D  P  +  G
Sbjct: 139 DIFPVGKLGIEMLDFTMCNPPFYASIDDMLDSARQKDLPPSSACTG 184


>gi|254471298|ref|ZP_05084700.1| arsenite methyltransferase [Pseudovibrio sp. JE062]
 gi|211959444|gb|EEA94642.1| arsenite methyltransferase [Pseudovibrio sp. JE062]
          Length = 277

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 26/202 (12%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEK------RDVVRILDLGTGTGA-VCLALLKESPFFK 123
              P  + + + +  L  S            ++   +LDLG+G G  + LA  K  P  K
Sbjct: 34  VLAPDYDAQEISEDLLGSSFGCGNPLAFSQIKEGETVLDLGSGAGLDLILAAEKTGPSGK 93

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVD 181
            +G+D+S   +  A++N    G+    +  Q         +   D I+SN     S    
Sbjct: 94  VIGIDVSEDMIAQARTNCDKYGLQ-NIELHQGVIEDLPFPDSSIDWIISNCVINLSADKA 152

Query: 182 CLGLEV-RDFDPRISLDGGIDGLSHYRTIADGVSR--HLNKDGLCSVEIGYNQKVDVVRI 238
            +  EV R   P     GG   L     IA+ +    HL++D L +   G   + D + +
Sbjct: 153 AVFAEVYRVLKP-----GGH--LMISDMIAEALPDWMHLHQDLLSACISGAVSEADYLEL 205

Query: 239 FESRKLFLVNAFKDYGGNDRVL 260
                L  +         DR+ 
Sbjct: 206 AHQAGLTDLKIL------DRMT 221


>gi|209696241|ref|YP_002264171.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida
           LFI1238]
 gi|226706548|sp|B6ENA3|PRMA_ALISL RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|208010194|emb|CAQ80521.1| ribosomal protein L11 methyltransferase [Aliivibrio salmonicida
           LFI1238]
          Length = 294

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWREIPEPDAINVMLDPGLAFGTGTHATTALCLEWLESIDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFSSVEGLF 165
           G+G + +A   +    K VG+DI  +A+  +K NA  NGV+E+    L  D   ++  + 
Sbjct: 169 GSGILAIA-AIKLGAAKVVGIDIDPQAITASKDNATRNGVAEQLTLFLPQDQPENL--VA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|152991152|ref|YP_001356874.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2]
 gi|166223425|sp|A6Q4V8|PRMA_NITSB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|151423013|dbj|BAF70517.1| ribosomal protein L11 methyltransferase [Nitratiruptor sp. SB155-2]
          Length = 280

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 17/121 (14%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAFSLPRIEK------------RDVVRILDLGTGTGA 110
              +    +EP+   T + +D ALAF     E             +  + +LD+G G+G 
Sbjct: 97  EFYIHPSWYEPKEGKTNIKIDPALAFGSGHHETTRGCLNAIQKYVQPGMELLDVGCGSGI 156

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +A  K+         D    ALE ++ N   NGV  R   + S   ++ +  +D++++
Sbjct: 157 LSIAAAKK--GAVVDICDTDALALEESQKNFSLNGVEFREGWVGS--AANAKKKYDIVIA 212

Query: 171 N 171
           N
Sbjct: 213 N 213


>gi|298530216|ref|ZP_07017618.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509590|gb|EFI33494.1| ribosomal L11 methyltransferase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 295

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 30/159 (18%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE-------------------TELLVDSALAFSLPR 92
           W+DF+     + R  +  D  +   +                   T  L   A++     
Sbjct: 80  WKDFFTPIEVDQRFVVLPDWLQHEKQAAVPIIITPKMAFGTGHHATTYLCLRAVSRLWDL 139

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
              +     LDLGTG+G + +A  +      G+GVDI   A+E A+ N   N V E F+ 
Sbjct: 140 GYLKSGQNFLDLGTGSGILGIACSRL--GMSGLGVDIDPVAVENAQENTRINRVGEMFEV 197

Query: 153 LQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            +    S   +  F++I+ N   I S  +  L  ++   
Sbjct: 198 REGGLSSLRPDQKFNLILGN---ILSSTLKQLAPDIIKH 233


>gi|78221363|ref|YP_383110.1| ribosomal L11 methyltransferase [Geobacter metallireducens GS-15]
 gi|78192618|gb|ABB30385.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Geobacter
           metallireducens GS-15]
          Length = 214

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 4/101 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           + RI     +R LDLG+GTG + +A          V VDI  KA E   +N   NG+  R
Sbjct: 54  MERIPGIAGMRCLDLGSGTGILAVA-AIRLGAASVVAVDIDPKAAESCAANVRLNGMEGR 112

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPY--IESVIVDCLGLEVR 188
             ++  +  S     +D++++N  Y  I   +   +   VR
Sbjct: 113 IFSVCGELASVGREPYDLLLAN-IYADIHLALAHEMVGLVR 152


>gi|15805939|ref|NP_294638.1| hypothetical protein DR_0914 [Deinococcus radiodurans R1]
 gi|6458636|gb|AAF10491.1|AE001944_2 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 298

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 36/180 (20%)

Query: 83  DSALAFSLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           D A A  L  +   D+   R+LDLG G G +             V  D+    +  ++  
Sbjct: 142 DKATAILLTHLADLDLTGQRVLDLGCGAGLIGAWAASRGGQVTLVDGDLQS--VRSSERT 199

Query: 141 AVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N +    + + SD  +++ E  FDV+++NPP+     V                   
Sbjct: 200 LAANALPG--EVIHSDVDAALGERQFDVMLTNPPFHVGRGVV------------------ 239

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV---E-IGYNQKV----DVVRIFESRKLFLVNAFK 251
              L   R       R L   G   +   E + Y Q +     V  +   +   ++   +
Sbjct: 240 ---LDVAREFIATAGRRLVPGGRMFLVANEPLPYEQALGALGTVREVVREQGFKVLELRR 296


>gi|332188541|ref|ZP_08390261.1| ribosomal L11 methyltransferase family protein [Sphingomonas sp.
           S17]
 gi|332011446|gb|EGI53531.1| ribosomal L11 methyltransferase family protein [Sphingomonas sp.
           S17]
          Length = 310

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 66/179 (36%), Gaps = 33/179 (18%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +    V   +D+GTGTG +  A+         V  DI   A+++   NAV NGV   
Sbjct: 140 LDAMAGETVTNAIDVGTGTGLLAFAVRHLWSEAMVVATDIDPIAIDVTADNAVINGVDGV 199

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
              +     +      D I++  PY + VI + L   +    P ++   G          
Sbjct: 200 ALIVADGALA------DPIMAASPY-DLVIANILAGPLISMAPELAAIAGP--------- 243

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK--LFLVNAFKDY------GGNDRVL 260
               +  L   GL        Q+ DVV  +E+    L  V+   D+       G +R +
Sbjct: 244 --EATMVLA--GLL-----ETQRADVVAAYEACGCALETVDRRGDWSVLRLRAGKERFV 293


>gi|189194583|ref|XP_001933630.1| trimethylguanosine synthase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979194|gb|EDU45820.1| trimethylguanosine synthase [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 240

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 12/147 (8%)

Query: 58  RDFYNVRLTL----SSDTFEPRP----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + +++ R  +        +         T   + + +A  +     ++   I+D   G G
Sbjct: 24  KKYWHQRFKIWEKYDKGIWMTEDAWFGVTPEPIANKIAAHISESAPKEKTVIVDAFAGVG 83

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLFD 166
              +AL +   + +   ++   K L  AK NA   GVS +   L  D F  +    G  +
Sbjct: 84  GNAIALARSGRWERVFAIEKDPKTLMCAKHNAEIYGVSSKIFWLPGDCFDVISRFSGQSN 143

Query: 167 VIV-SNPPYIESVIVDCLGLEVRDFDP 192
           V+V ++PP+  +        ++   +P
Sbjct: 144 VVVFASPPWGGTEYGAEDVFDLTKMEP 170


>gi|159174272|gb|ABW96245.1| microcystin synthetase [Microcystis aeruginosa SPC 777]
          Length = 456

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 86/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 18  SKTLIAYVVGQSKEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 77

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 78  SYTGEP-------IPVAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 123

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N       E+   L S  D F  +E   FD I+ N   
Sbjct: 124 PHCQCYWGTDISSVALDHIQRIN-QEWPQLEQVRLLHSTADNFEGLESEGFDTIILN--- 179

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 180 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 212

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 213 VRNLQLMEAFHADVELYK 230


>gi|295688523|ref|YP_003592216.1| methyltransferase type 11 [Caulobacter segnis ATCC 21756]
 gi|295430426|gb|ADG09598.1| Methyltransferase type 11 [Caulobacter segnis ATCC 21756]
          Length = 347

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 27/165 (16%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
              L  SS  + P   T    ++A L  +    + RD   IL+LG G G++ L +    P
Sbjct: 80  GPNLKYSSGLYPPGATTLAEGEAAALRETAEHADLRDGQAILELGCGWGSLSLWMAARYP 139

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   V  S       ++ A   G+               +  FD +VS          
Sbjct: 140 NAQITSVSNSATQRAFIEARAAARGLGNLTVVTADMNDFQTDQRFDRVVS---------- 189

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                 V  F+   +           R +   V   L  DGL  +
Sbjct: 190 ------VEMFEHMSNW----------RALLTRVRDWLKPDGLLFL 218


>gi|260580069|ref|ZP_05847899.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           RdAW]
 gi|260093353|gb|EEW77286.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           RdAW]
          Length = 295

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVTDRLQLFLSDE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|77748582|ref|NP_641710.2| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           axonopodis pv. citri str. 306]
          Length = 431

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 188 LERICQKLRLAPHHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELANQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLRD-YRDLEGRFDRVVS 270


>gi|315645960|ref|ZP_07899081.1| ribosomal protein L11 methyltransferase [Paenibacillus vortex V453]
 gi|315278721|gb|EFU42035.1| ribosomal protein L11 methyltransferase [Paenibacillus vortex V453]
          Length = 325

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 22/126 (17%)

Query: 55  LGWRDFYN-------VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----------- 96
             W+ ++        + +  + + + P  + E +++     +                  
Sbjct: 114 TAWKQYFKPIRVSERLTIKPTWEEYTPESDNESIIELDPGMAFGTGTHPTTSLCLRTLEM 173

Query: 97  ---DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
                  ++D+GTG+G + +         + + +D+   A+  AK N   NG+ +     
Sbjct: 174 VIQGGEEVIDVGTGSGILSIG-AAHLGASRILALDLDPVAVSSAKENTRLNGLEDVITVK 232

Query: 154 QSDWFS 159
           +SD  S
Sbjct: 233 ESDLLS 238


>gi|269986188|gb|EEZ92500.1| protein of unknown function Met10 [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 163

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+LD+  G G   + + K +       +DI+  A+E+ K N   N +S   D    
Sbjct: 13  KSKERVLDMFCGVGPFTIPIAKIAKN--VTAIDINKNAIELLKKNIKLNKIS-NIDYYCG 69

Query: 156 D---WFSSVEGLFDVIVSNPP 173
           D      S+EG FD ++ N P
Sbjct: 70  DSKKITKSLEGKFDRVIMNFP 90


>gi|123443996|ref|YP_001007966.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|166223501|sp|A1JRL5|PRMA_YERE8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|122090957|emb|CAL13839.1| ribosomal protein L11 methyltransferase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 293

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 32/146 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156
              ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER +  L  D
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKD 217

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    DV+V+N           L   +R+  P IS             +      H
Sbjct: 218 QPADLSA--DVVVAN----------ILAGPLRELAPLIS-------------VLPVAGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +      Q   V + +E +
Sbjct: 253 LGLSGVLA-----TQAAGVAQAYEDK 273


>gi|288940074|ref|YP_003442314.1| type 11 methyltransferase [Allochromatium vinosum DSM 180]
 gi|288895446|gb|ADC61282.1| Methyltransferase type 11 [Allochromatium vinosum DSM 180]
          Length = 250

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 56/153 (36%), Gaps = 27/153 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +L  +     ++I D+G GTGA  L L +     +   VD     L++    A   G+
Sbjct: 28  AIALAGLAPTTPLKIADIGCGTGAAALVLARRL-NAQITAVDFLPDFLDVLAQRAERAGL 86

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           SER           + G  D +    P+ +         +V   +      G I  +   
Sbjct: 87  SERIT--------PLAGSMDSL----PFADEEY------DVLWSE------GAIYNIGFA 122

Query: 207 RTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRI 238
           R IAD   R+L   GL  V EI +        +
Sbjct: 123 RGIAD-WKRYLKPGGLLVVSEITWTTAERPPEL 154


>gi|225442369|ref|XP_002276511.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297743126|emb|CBI35993.3| unnamed protein product [Vitis vinifera]
          Length = 570

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+++F      +  V   L      +       +LDL  GTG + L L +   
Sbjct: 379 RGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRGDGSEIVLDLFCGTGTIGLTLSRRVR 438

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
                G ++  +A+  A+ NA  NG+      ++ D       F       DV++S+P
Sbjct: 439 --HVYGYEVVAQAVSDARRNAKLNGIC-NATFIEGDLNKIGENFGKDFPKPDVVISDP 493


>gi|325916598|ref|ZP_08178861.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537152|gb|EGD08885.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 428

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  ++A       G
Sbjct: 188 LERICQKLRLGPQHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFDLASQRIADAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +++R   L SD +  ++G FD +VS
Sbjct: 247 LTDRVTVLLSD-YRDLQGRFDRVVS 270


>gi|304389329|ref|ZP_07371294.1| rRNA (guanine-N(2)-)-methyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304327447|gb|EFL94680.1| rRNA (guanine-N(2)-)-methyltransferase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 186

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 34/170 (20%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL +      P  E    V  A+   L          +LDL  G+GA+ L        
Sbjct: 11  GLRLNVPKSGTRPTSER---VREAMFSHLLCSGFPQGATVLDLFAGSGALGLE-ALSRGG 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPYIE 176
              V VD +  A ++ ++N       +R   L  D    V  L     FD+I  +PPY  
Sbjct: 67  ASAVFVDAAGSAAKVLRANIDALRYRDRVRVLVKDAAKFVSELKPTDCFDLIFLDPPY-- 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                 L   V                     I  G++ HL+ +G+  +E
Sbjct: 125 -----ALAPYVLC------------------EILAGLTAHLSPEGIMVLE 151


>gi|298488840|ref|ZP_07006866.1| 16S rRNA methylase RsmC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156640|gb|EFH97734.1| 16S rRNA methylase RsmC [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 374

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N             
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSATENWRATLGERAVAVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    DV++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|172037116|ref|YP_001803617.1| hypothetical protein cce_2201 [Cyanothece sp. ATCC 51142]
 gi|171698570|gb|ACB51551.1| hypothetical protein cce_2201 [Cyanothece sp. ATCC 51142]
          Length = 370

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 73/223 (32%), Gaps = 46/223 (20%)

Query: 12  CRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRIL--GWRDFY------NV 63
             + GLS  Q+ ++P+ V+   Q           +       +   G  DF+      + 
Sbjct: 103 QHIKGLS--QLELNPNLVIPRHQTKV-------DIHRMPGGYLKDQGDDDFWSGVLYDHG 153

Query: 64  RLTLSSDTFEPRPET--ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
                     P  +   + +++  L    P+    +  +ILD+G   G   L   +  P 
Sbjct: 154 VFLYGRGWLGPLNDEFGQTIIEQLLKSHYPQF---NPQKILDMGCSVGHSTLPYAQAYPE 210

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +  G+D+    L  A++ A   G    F    ++     +  FD++VS+      +I+ 
Sbjct: 211 AEVWGIDLGASLLRYARARANGLGQKVYFAQQNAEQTDFEDNRFDLVVSH------IIMH 264

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            +    +                  + I     R L   G+  
Sbjct: 265 EIPNVAK------------------QRIFKESYRLLKTGGIMV 289


>gi|115466582|ref|NP_001056890.1| Os06g0162600 [Oryza sativa Japonica Group]
 gi|55296080|dbj|BAD67642.1| putative early nodule-specific-like protein ENOD8 [Oryza sativa
           Japonica Group]
 gi|113594930|dbj|BAF18804.1| Os06g0162600 [Oryza sativa Japonica Group]
 gi|215694922|dbj|BAG90113.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197644|gb|EEC80071.1| hypothetical protein OsI_21788 [Oryza sativa Indica Group]
          Length = 227

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 7/103 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVT 143
            L  +    +      + D G G G   L++       +  VG+DI  ++LE+A+ NA  
Sbjct: 36  MLYTAENSFDDITGKVVADFGCGCG--TLSVASSLLDAEHVVGIDIDPQSLELAQENAAD 93

Query: 144 NGVSERFDTLQSDWFS-SVEGLF-DVIVSNPPYIESVIVDCLG 184
             +    D +Q D  + ++ GL  D +V NPP+  S     + 
Sbjct: 94  LELD--IDLIQCDIKNLNLRGLLVDTVVMNPPFGTSRKGADME 134


>gi|326317245|ref|YP_004234917.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323374081|gb|ADX46350.1| Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 236

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 8/131 (6%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVR 100
           +VR               F ++ + L+    E  R    +L     A  L  ++ +   R
Sbjct: 43  VVRREDFVPPAY--RGMAFMDMEIPLNPSAEEAQRLGQCMLAPRVEARMLQDLQVKPTDR 100

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L++G G+G +   L   +     V ++I    +E A+ N ++ G+ +     Q D    
Sbjct: 101 VLEIGAGSGYMAALLAHRAE--HVVTLEIVPDLVEFARENLLSAGI-DNVTVRQGDGARD 157

Query: 161 --VEGLFDVIV 169
              +G FDVIV
Sbjct: 158 AIPDGPFDVIV 168


>gi|260665337|ref|ZP_05866185.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii SJ-7A-US]
 gi|260560841|gb|EEX26817.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii SJ-7A-US]
          Length = 510

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
             A  R +        L  + F +       + + PR   + LV+           +   
Sbjct: 146 KEAKERDILGRVYEYFL--QKFASNEKKNGGEFYTPRSVVKTLVEMV---------EPFK 194

Query: 99  VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + D   G+G + +   +       +       G + +    ++AK N    G+   F 
Sbjct: 195 GTVYDPCCGSGGMFVQSEQFVQEHQGQIADLSVYGQESNPTTWKLAKLNLAIRGIDNNFG 254

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG----GIDGLS 204
             Q+D F++       FD I++NPP+     V   G E    DPR    G    G    +
Sbjct: 255 AHQADTFTNDLHKGTHFDYILANPPF----NVKKWGGEKLKDDPRWK-YGIPPEGNANYA 309

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               I       LN DG    
Sbjct: 310 WIEHIISK----LNPDGKAGF 326


>gi|182438237|ref|YP_001825956.1| putative cyclopropane fatty acid synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178466753|dbj|BAG21273.1| putative cyclopropane fatty acid synthase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 434

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  +   R+LD+G G G++ +   +E    +  GV +S +    A+      G
Sbjct: 186 LDLVCRKLGLKKGDRLLDVGCGWGSMAIHAAREY-GAQVTGVTLSREQAAHARKRIAEEG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 245 LTDRIEIRVQDYRDVGDGPYDAISS-------IGMAEHVGSVR----------------- 280

Query: 206 YRTIADGVSRHLNKDGLCS 224
           YR  A+ +   L   G   
Sbjct: 281 YREYAEDLYALLKPGGRLL 299


>gi|188584179|ref|YP_001927624.1| ribosomal L11 methyltransferase [Methylobacterium populi BJ001]
 gi|179347677|gb|ACB83089.1| ribosomal L11 methyltransferase [Methylobacterium populi BJ001]
          Length = 305

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +  +++R   RILD+GTGTG +  A  K       V  D+  +A+  A+ NA  NG
Sbjct: 146 LRALVAELKQRRPARILDVGTGTGILGFAAAKALHTP-VVAGDLDPEAVTTARGNARLNG 204

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
           +        +       +     FDV+ +N
Sbjct: 205 LGPYMRLYTAPGVRHALADRSRRFDVVFAN 234


>gi|37521087|ref|NP_924464.1| hypothetical protein glr1518 [Gloeobacter violaceus PCC 7421]
 gi|35212083|dbj|BAC89459.1| glr1518 [Gloeobacter violaceus PCC 7421]
          Length = 440

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
            R+      RILD G G+G   LAL + +P  + VG+D+S +++ +A+     +G  S  
Sbjct: 50  QRVVSGAGKRILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAE 109

Query: 150 FDTLQSDWFSSVEGLFDVIVS 170
           F  L  +    +   FD+I  
Sbjct: 110 FHALPIERVGELGEDFDLINC 130


>gi|119774169|ref|YP_926909.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella amazonensis
           SB2B]
 gi|143581857|sp|A1S4D3|RUMA_SHEAM RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|119766669|gb|ABL99239.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Shewanella amazonensis
           SB2B]
          Length = 443

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 29/176 (16%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++L  +   F        +  + +A ++  ++     R+LDL  G G   L L K+   
Sbjct: 264 GLKLAFAPGNFI--QVNGEVNQAMVAQAMNWLDVHAGERVLDLFCGVGNFSLPLAKQ--G 319

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            + VGV+   + +  AK NA  NG+ +      +D    +           P++  +   
Sbjct: 320 AEVVGVEGVPEMVAQAKQNAAINGL-DNLSFYCADLSEDLAAE--------PWLGKIDKL 370

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTI-------ADGVSRHLNKDGLCSVEIGYN 230
            L           +  G  + L   + +              L +D +   E GY 
Sbjct: 371 LLDP---------ARAGAYESLKWLKKMKPAKVLYVSCNPASLARDSVLLFEAGYQ 417


>gi|299769489|ref|YP_003731515.1| ribosomal protein L11 methyltransferase [Acinetobacter sp. DR1]
 gi|298699577|gb|ADI90142.1| ribosomal protein L11 methyltransferase [Acinetobacter sp. DR1]
          Length = 301

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 73/198 (36%), Gaps = 43/198 (21%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRLTLSSDTFEPRPE--- 77
           PD+ +   +   L + +              W D+Y       +  +  +  EP PE   
Sbjct: 82  PDAPIRHEE---LEDQVWERA----------WMDYYEPIQIGEKFWIVPEWLEP-PEADA 127

Query: 78  TELLVDSALAF----------SLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGV 125
           T + +D  LAF           L  + K DV    ++D G G+G + +A L      K  
Sbjct: 128 TNIKLDPGLAFGTGNHASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAK-KVY 186

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCL 183
             DI  +A+   K NA  NGV +       + F         DV+V+N   I +  +  L
Sbjct: 187 ATDIDPQAVLATKQNAELNGVLDGLYVGLPEEFDQEFKPQQADVLVAN---ILAGPLMVL 243

Query: 184 GLEVRD---FDPRISLDG 198
             E  +    +   +L G
Sbjct: 244 APEFANLIKSEGEFALAG 261


>gi|323455833|gb|EGB11701.1| hypothetical protein AURANDRAFT_2373 [Aureococcus anophagefferens]
          Length = 394

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTLQS 155
              +LDL   +G   L   K     +  GVD S  A+++A+ NA  NG+      +   S
Sbjct: 224 GKSVLDLYCYSGGFALNAAKHGAT-EARGVDSSATAVDLARRNAAANGLDACAFEEADVS 282

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
            W  + +  +DV+V +PP +       L    R +    +L  G 
Sbjct: 283 AWLKASDARYDVVVCDPPKLAPSAK-TLPRATRKYQKINALALGA 326


>gi|317012719|gb|ADU83327.1| adenine specific DNA methyltransferase [Helicobacter pylori
           Lithuania75]
          Length = 377

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 37/172 (21%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y + +      F P+     +VD  L        K +   +L+   G G    + LK  
Sbjct: 1   MYQLDIKTLGQVFTPKK----IVDFMLTL------KHNQGSVLEPSAGDG----SFLKRL 46

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
                VG++I  K       NA           L  D+F   +E  FD I+ NPPY++  
Sbjct: 47  KKA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHK 90

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +     E   +    SL      L  Y    +   RHL   G        +
Sbjct: 91  DIAPSTKEKLHY----SLFDERSNL--YLFFIEKAIRHLKPKGELIFITPRD 136


>gi|323345539|ref|ZP_08085762.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC
           33269]
 gi|323093653|gb|EFZ36231.1| ribosomal protein L11 methyltransferase [Prevotella oralis ATCC
           33269]
          Length = 305

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 4/74 (5%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--DW 157
           RILD G GTG + +A   +    + VG DI   ++  +K NA  N + +    L      
Sbjct: 170 RILDCGCGTGILGIA-ALKLGAAQAVGYDIDEWSVNNSKHNAQINRI-DNMQVLHGNVHV 227

Query: 158 FSSVEGLFDVIVSN 171
            + V G+FD++++N
Sbjct: 228 LTHVNGIFDIVLAN 241


>gi|237745651|ref|ZP_04576131.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
           formigenes HOxBLS]
 gi|229377002|gb|EEO27093.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
           formigenes HOxBLS]
          Length = 407

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I  R   R+LD+G G GA+ +    E      VG+ +S    E+A+      G
Sbjct: 161 IDHILTKIRVRPGDRLLDIGCGWGALAIR-AAEKYGANVVGITLSKNQYELARQRVREKG 219

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++ D    D +  V G FD I S
Sbjct: 220 LEDKIDIRIQD-YRDVTGQFDRITS 243


>gi|194036729|ref|XP_001927911.1| PREDICTED: trimethylguanosine synthase [Sus scrofa]
          Length = 851

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 68/158 (43%), Gaps = 18/158 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ++D   G G   +         + + +DI    +++A++NA   GV+++ + +Q D+   
Sbjct: 692 VVDAFCGVGGNTIQFALTGK--RVIAIDIDPVKIDLARNNAEVYGVADKIEFIQGDFLQL 749

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-------IADG 212
           +     DV+  +PP+           ++R     ++     DG   +R        I   
Sbjct: 750 APRLKADVVFLSPPWGGPDYATAETFDIRT---MMA----PDGFEIFRLSQMITNNIVYF 802

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           + R+ + D + S+  G   +V++ + F + KL  + A+
Sbjct: 803 LPRNADVDQVASL-AGPGGQVEIEQNFLNNKLKTITAY 839


>gi|78212264|ref|YP_381043.1| methyltransferase [Synechococcus sp. CC9605]
 gi|78196723|gb|ABB34488.1| possible methyltransferase [Synechococcus sp. CC9605]
          Length = 231

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 39/178 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +     +R  Y+    +SS +         L   A+   L     +    +LDL  G+
Sbjct: 27  RPLAY--RYRWIYDTVTAVSSLSVGGVERLRSLGLEAVQPHL-----KPGAAVLDLCCGS 79

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G      L     F   G+D+S +AL++A   A  +   ER + L  D            
Sbjct: 80  GEAAAPWLAA--GFAVTGLDVSPRALDLA---AQRHPSLERVEGLAED------------ 122

Query: 169 VSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              PP +       + L V   + PR             + +     R L   G   +
Sbjct: 123 ---PP-LADASFSAIQLSVALHEFPRS----------DRKRVLRSALRLLEPGGWLVL 166


>gi|327402274|ref|YP_004343112.1| 23S rRNA m(5)U-1939 methyltransferase [Fluviicola taffensis DSM
           16823]
 gi|327317782|gb|AEA42274.1| 23S rRNA m(5)U-1939 methyltransferase [Fluviicola taffensis DSM
           16823]
          Length = 475

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D   I+DL  GTG +   + +     + +GVDI  +A+E AK NA  N +S       +
Sbjct: 325 KDGGVIMDLFCGTGTIGQLVAQRVNAGEIIGVDIVEEAIEDAKRNAKRNNLSH-LHFFAA 383

Query: 156 D------WFSSVEGLFDVIVSNPP 173
           D               D IV +PP
Sbjct: 384 DVGKFLTLHPEYLNRIDTIVLDPP 407


>gi|260592501|ref|ZP_05857959.1| ribosomal protein L11 methyltransferase [Prevotella veroralis
           F0319]
 gi|260535547|gb|EEX18164.1| ribosomal protein L11 methyltransferase [Prevotella veroralis
           F0319]
          Length = 288

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+LD G GTG + + +  +    +    DI   ++  A+ NA  N V    D L
Sbjct: 148 QNLTGKRVLDCGCGTGILGI-VAAKYGVKEVFAYDIDEWSVNNAQHNAELNEVE--LDVL 204

Query: 154 QSD--WFSSVEGLFDVIVSN 171
           + D    S + G+FD +++N
Sbjct: 205 EGDKRVLSHISGVFDFVLAN 224


>gi|148269384|ref|YP_001243844.1| methyltransferase type 11 [Thermotoga petrophila RKU-1]
 gi|147734928|gb|ABQ46268.1| Methyltransferase type 11 [Thermotoga petrophila RKU-1]
          Length = 216

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 46/134 (34%), Gaps = 15/134 (11%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             +DV  +L+LG+G G V  AL K     + VGV+   +  E A      N +  +   +
Sbjct: 35  PSKDVRNVLELGSGVGTVSFALAKLY-NVQVVGVEKEKELYEKALEGISLNKLEGKVSFV 93

Query: 154 QSDW--FSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            S           FD++VSNPP+   V     L    R  + R                 
Sbjct: 94  NSSVEELPFPWESFDMVVSNPPHHTKVKSPNHLRASTRSIEKR-----------DIEKFV 142

Query: 211 DGVSRHLNKDGLCS 224
               R L   G   
Sbjct: 143 QATFRFLKNGGTAV 156


>gi|37521085|ref|NP_924462.1| hypothetical protein glr1516 [Gloeobacter violaceus PCC 7421]
 gi|35212081|dbj|BAC89457.1| glr1516 [Gloeobacter violaceus PCC 7421]
          Length = 449

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 1/81 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SER 149
            R+      RILD G G+G   LAL + +P  + VG+D+S +++ +A+     +G  S  
Sbjct: 56  QRVVSGAGKRILDAGCGSGFTSLALAQANPGARIVGIDLSERSVAVARERLAFHGFKSAE 115

Query: 150 FDTLQSDWFSSVEGLFDVIVS 170
           F  L  +    +   FD+I  
Sbjct: 116 FHALPIERVGELGEDFDLINC 136


>gi|333026484|ref|ZP_08454548.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Streptomyces sp. Tu6071]
 gi|332746336|gb|EGJ76777.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Streptomyces sp. Tu6071]
          Length = 434

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ R   R+LD+G G G++ L   +E    + VGV +S +    A+      G
Sbjct: 190 LDLIATKLDLRPGQRLLDVGCGWGSMALHAAREY-GVEVVGVTLSREQAAYARKRVAEEG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++ +    D+    +G FD I S            +   V              G + 
Sbjct: 249 LGDKVEIRVQDYRDVRDGPFDAISS----------IGMAEHV--------------GSAR 284

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 285 YEEYAHDLYALLRPGGRLL 303


>gi|332535332|ref|ZP_08411131.1| type I restriction-modification system, DNA-methyltransferase
           subunit M [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035245|gb|EGI71752.1| type I restriction-modification system, DNA-methyltransferase
           subunit M [Pseudoalteromonas haloplanktis ANT/505]
          Length = 544

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 25/158 (15%)

Query: 54  ILGWR-DFYNVRLTLSSDT-----FEPRPETELLVDSALAFSLP--RIEKRDVVRILDLG 105
           ILG   +F   +    S       + P+P + +L +  +  S       K+ + ++LD  
Sbjct: 181 ILGDAYEFLISKFAAGSGQKAGEFYTPQPISTILSEIVILDSQEPKTGPKKKLNKVLDFA 240

Query: 106 TGTGAVCLALLKESPFF-----KGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
            G+G++ L + K          K  G + +     +A+ N + +G+ +  FD    D   
Sbjct: 241 CGSGSLLLNVRKHIVDAGGSVGKIYGQEKNVTTFNLARMNMLLHGIKDTEFDIHHGDTLL 300

Query: 160 SVEG-----------LFDVIVSNPPYIESVIVDCLGLE 186
           +               FD IV+NPP+           E
Sbjct: 301 NDWDMLSEMNPAKKLKFDAIVANPPFSYRWDPSEAQGE 338


>gi|209522375|ref|ZP_03270990.1| ribosomal protein L11 methyltransferase [Burkholderia sp. H160]
 gi|209497193|gb|EDZ97433.1| ribosomal protein L11 methyltransferase [Burkholderia sp. H160]
          Length = 300

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+      +G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWIEQSVKAGQSVLDYGCGSGILAI-LAKKCGADPVIGIDIDPQAVESARHNSERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +    +      + +   I+SNP
Sbjct: 213 AEVTYGLPDACPAGEFDVVVANILSNP 239


>gi|254414464|ref|ZP_05028230.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
 gi|196178694|gb|EDX73692.1| Methyltransferase domain family [Microcoleus chthonoplastes PCC
           7420]
          Length = 264

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 26/172 (15%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ +   L    +    RILDLG GTG+  L L +  P    +G+D+S   L +A   A 
Sbjct: 73  ETRIREQLITTIENQPSRILDLGCGTGSTTLMLKQAFPEAVVIGLDLSPYMLIVADYKAE 132

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+  ++    ++     +  FD++        S+++     +                
Sbjct: 133 QAGLDIQWQHGLAEAAGFDDASFDLVTV------SMVLHETPPQ---------------- 170

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
               + I     R L   G   +  G  +K+          LF     KDY 
Sbjct: 171 --ISQLIVQECCRLLEPGGQLIILDGNQRKLRYAHWLIE--LFREPYSKDYA 218


>gi|163813943|ref|ZP_02205337.1| hypothetical protein COPEUT_00096 [Coprococcus eutactus ATCC 27759]
 gi|158450813|gb|EDP27808.1| hypothetical protein COPEUT_00096 [Coprococcus eutactus ATCC 27759]
          Length = 457

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            ++  +S  +F  +  T+   +     +   +       I DL +GTG +   L    P 
Sbjct: 280 GLQFKISPFSF-FQTNTKS-AERLYDKARSYVGDTKDAVIFDLYSGTGTIAQLLA---PV 334

Query: 122 FK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPP 173
            K  +GV+I  +A+  A+ NA  NG+ +  + +  D       +E   D IV +PP
Sbjct: 335 AKKVIGVEIVEEAVAAARVNAKLNGL-DNCEFIAGDVLKVIDEIEEKPDFIVLDPP 389


>gi|325579239|ref|ZP_08149195.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159474|gb|EGC71608.1| ribosomal protein L11 methyltransferase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 295

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A LK       +G+DI  +A+  +++NA  NGV++R     SD 
Sbjct: 159 GKTVIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASRNNAEQNGVADRLQLFLSD- 216

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 217 DKPADLKADVVVAN 230


>gi|300696718|ref|YP_003747379.1| sam-dependent methyltransferase protein [Ralstonia solanacearum
           CFBP2957]
 gi|299073442|emb|CBJ52956.1| putative sam-dependent methyltransferase protein [Ralstonia
           solanacearum CFBP2957]
          Length = 274

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 30/137 (21%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +E      +LD+ +G+G   L L + S   +  GVDI    L+ A+  A   G+ +R 
Sbjct: 55  QWLELSPQSHLLDVCSGSGGPALFLARNS-GCRVTGVDIHPDGLQTARQLAQELGLQDRS 113

Query: 151 DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             +  D    +   +G FD +                  V     R++L           
Sbjct: 114 QFVDCDVRQRMPFPDGTFDALWC-------------VDSVIHIPDRLAL----------- 149

Query: 208 TIADGVSRHLNKDGLCS 224
                  R L   G   
Sbjct: 150 --LREWCRLLKPGGRFL 164


>gi|319764332|ref|YP_004128269.1| ribosomal protein l11 methyltransferase [Alicycliphilus
           denitrificans BC]
 gi|317118893|gb|ADV01382.1| ribosomal protein L11 methyltransferase [Alicycliphilus
           denitrificans BC]
          Length = 298

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + + R+LD G G+G + +   K         VDI   A+E  + NA+ NGV      L +
Sbjct: 167 KALGRVLDYGCGSGILAIGAAK-FGALDIDAVDIDPAAVEATRQNALANGVY-----LNA 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G +  +++N
Sbjct: 221 GLPEQAQGQYQTVLAN 236


>gi|317133101|ref|YP_004092415.1| methyltransferase small [Ethanoligenens harbinense YUAN-3]
 gi|315471080|gb|ADU27684.1| methyltransferase small [Ethanoligenens harbinense YUAN-3]
          Length = 240

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +   R  DL +G G V L   ++ P      V++  +A E+A+ +A  NG +      Q
Sbjct: 38  PKPGARSADLCSGCGIVPLLWCRDDPVRAVDAVELLPEAAELARRSAEANGFANLRVFGQ 97

Query: 155 S--DWFSSVEGLFDVIVSNPPYIE 176
                 ++  G +D++  NPPY  
Sbjct: 98  DLRTLPAAFAGQYDLVACNPPYRP 121


>gi|260549421|ref|ZP_05823640.1| ribosomal protein L11 methyltransferase [Acinetobacter sp. RUH2624]
 gi|260407530|gb|EEX01004.1| ribosomal protein L11 methyltransferase [Acinetobacter sp. RUH2624]
          Length = 301

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 56/137 (40%), Gaps = 24/137 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPE---TELLVDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   T + +D  LAF           L  + K DV
Sbjct: 100 WMDYYEPIQIGEKFWIVPEWLEP-PEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDV 158

Query: 99  VR--ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      K    DI  +A+   K NA  NGV +R      +
Sbjct: 159 KDKIVIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLDRLYVGLPE 217

Query: 157 WFSS--VEGLFDVIVSN 171
            F         DV+V+N
Sbjct: 218 EFDQEFKPQQADVLVAN 234


>gi|222479812|ref|YP_002566049.1| Methyltransferase type 12 [Halorubrum lacusprofundi ATCC 49239]
 gi|222452714|gb|ACM56979.1| Methyltransferase type 12 [Halorubrum lacusprofundi ATCC 49239]
          Length = 246

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 28/126 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD GTG+G +   L +          +I  +  E+A+ N VT GV++R +    D   
Sbjct: 90  RVLDAGTGSGILAAYLGRA--GADVTSYEIDSEFAEVARGNMVTAGVADRVEVRTGDLTE 147

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            ++ L D                   +V      ++LD G         + +     L  
Sbjct: 148 ELDALAD---------------EDPFDV------LTLDTGDAP-----EVVERADDLLAP 181

Query: 220 DGLCSV 225
            G  +V
Sbjct: 182 GGYLAV 187


>gi|50657107|dbj|BAD32790.1| microcystin synthetase [Microcystis aeruginosa MCS3]
          Length = 414

 Score = 57.8 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 66/203 (32%), Gaps = 49/203 (24%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I+GW   Y            P  +    +D  +   L +  K    ++L++G GTG +  
Sbjct: 47  IVGWNSSYTGEP-------IPVAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILF 95

Query: 114 ALLKESPFFKGVGVDISCKALEIAKS-NAVTNGVSERFDTLQS--DWFSSVE-GLFDVIV 169
            +      +   G DIS  AL+  +  N     + E+   L S  D F  +E   FD I+
Sbjct: 96  QVAPHCQHY--WGTDISSVALDYIQRINQEGPQL-EQVRLLHSTADNFEGLESERFDTII 152

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229
            N               V  + P I          +   + +G  + L   G   +    
Sbjct: 153 LN--------------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL---- 185

Query: 230 NQKVDVVRI-FESRKLFLVNAFK 251
               DV  +         V  +K
Sbjct: 186 ---GDVRNLQLMEAFHADVELYK 205


>gi|271499134|ref|YP_003332159.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
 gi|270342689|gb|ACZ75454.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya dadantii Ech586]
          Length = 386

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + ++   +I+DLG G G + L  L  +P       D S  A+  ++ N  
Sbjct: 225 DIGARFFMQHLPEQLDGKIVDLGCGNGVIGLTALALNPQASVSFFDESYMAVASSQRNVE 284

Query: 143 TNGVS--ERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N     +R   + +   + V       I+ NPP+ +   +                   
Sbjct: 285 DNRPQDKDRCSFVVNHALAGVGPDSQQAILCNPPFHQQQAITD----------------- 327

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 328 ----DIAWQMFVDARRCLTVGGEL 347


>gi|170695332|ref|ZP_02886478.1| ribosomal protein L11 methyltransferase [Burkholderia graminis
           C4D1M]
 gi|170139732|gb|EDT07914.1| ribosomal protein L11 methyltransferase [Burkholderia graminis
           C4D1M]
          Length = 300

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +    +LD G G+G + + L K+       G+DI  +A+E A+ N+  N 
Sbjct: 154 LCMEWLEQSVKPGQSVLDYGCGSGILAI-LAKKCGANPVYGIDIDPQAVESARHNSERNR 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
               +           E +   I+SNP
Sbjct: 213 AEVTYGLPDECPTGEFEIVVANILSNP 239


>gi|118474775|ref|YP_892494.1| ribosomal protein L11 methyltransferase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|254782834|sp|A0RQL1|PRMA_CAMFF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|118414001|gb|ABK82421.1| ribosomal protein L11 methyltransferase [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 275

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 8/128 (6%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + + +                S L      I  ++    LD+G G+G + +AL K     
Sbjct: 105 IDIIIDP-ALAFGSGHHESTSSCLNLISKYINLKECKIALDVGCGSGILSIALAKL--GL 161

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                D   +A+  +  NA  NG+  +F+ + +   +   G +DV+V+N   I S ++  
Sbjct: 162 AVDACDTDEQAVLSSTDNARKNGI--KFNNIWTGSITDANGRYDVVVAN---IISDVILL 216

Query: 183 LGLEVRDF 190
           L  +++  
Sbjct: 217 LSKDLKMH 224


>gi|67921842|ref|ZP_00515359.1| probable methyltransferase [Crocosphaera watsonii WH 8501]
 gi|67856434|gb|EAM51676.1| probable methyltransferase [Crocosphaera watsonii WH 8501]
          Length = 241

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 37/157 (23%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +L++D+ +A         +  RIL+LG GTG + L LLK  P  + V VD S + +E
Sbjct: 28  PYYDLMLDTLVACV-----PSNSSRILELGCGTGELSLKLLKHCPNAQIVAVDYSPRMIE 82

Query: 136 IAKSNAVTNGVSERFDTLQSD--------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           ++K         ER   +Q D            +   FD  VS      S+ +  L  E+
Sbjct: 83  MSKYKLGKTEFLERITFIQGDFGAWANGELKEEIGTNFDACVS------SLAIHHLIDEM 136

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +                    +   + ++L   G   
Sbjct: 137 KH------------------KLLTYIGKNLVDGGSFW 155


>gi|145628085|ref|ZP_01783886.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|145630071|ref|ZP_01785853.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145632363|ref|ZP_01788098.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           3655]
 gi|145634154|ref|ZP_01789865.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|145638200|ref|ZP_01793810.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittII]
 gi|148826374|ref|YP_001291127.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|148828153|ref|YP_001292906.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|229843963|ref|ZP_04464104.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|229846036|ref|ZP_04466148.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|260581943|ref|ZP_05849739.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           NT127]
 gi|166223416|sp|A5UD93|PRMA_HAEIE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223417|sp|A5UIB7|PRMA_HAEIG RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|144979860|gb|EDJ89519.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.1-21]
 gi|144984352|gb|EDJ91775.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|144987270|gb|EDJ93800.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           3655]
 gi|145268598|gb|EDK08591.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittAA]
 gi|145272529|gb|EDK12436.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittII]
 gi|148716534|gb|ABQ98744.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittEE]
 gi|148719395|gb|ABR00523.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittGG]
 gi|229811040|gb|EEP46757.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           7P49H1]
 gi|229812957|gb|EEP48645.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           6P18H1]
 gi|260095136|gb|EEW79028.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           NT127]
 gi|301169703|emb|CBW29304.1| methylase for 50S ribosomal subunit protein L11 [Haemophilus
           influenzae 10810]
 gi|309751356|gb|ADO81340.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R2866]
 gi|309973522|gb|ADO96723.1| Ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R2846]
          Length = 295

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSDE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|297620396|ref|YP_003708533.1| putative ribosomal protein L11 methyltransferase [Waddlia
           chondrophila WSU 86-1044]
 gi|297375697|gb|ADI37527.1| putative ribosomal protein L11 methyltransferase [Waddlia
           chondrophila WSU 86-1044]
          Length = 266

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
            +V R LD+G G+G + LA+       + VG +I  ++ E+A+ NA       R   +  
Sbjct: 128 PNVNRALDIGCGSGILALAIEALF-GAEVVGSEIDERSAEMARENA-----CGRIKVVHG 181

Query: 156 DWFSS----VEGLFDVIVSN 171
           +  SS        +D+IVSN
Sbjct: 182 NGVSSETIIERAPYDLIVSN 201


>gi|294851395|ref|ZP_06792068.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL
           07-0026]
 gi|294819984|gb|EFG36983.1| ribosomal RNA small subunit methyltransferase C [Brucella sp. NVSL
           07-0026]
          Length = 340

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 287 -------QSFIAAAASRLKPGGRLLM 305


>gi|302537678|ref|ZP_07290020.1| predicted protein [Streptomyces sp. C]
 gi|302446573|gb|EFL18389.1| predicted protein [Streptomyces sp. C]
          Length = 348

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)

Query: 55  LGWRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +GW + ++  L     +F +P  E  L+ +   A +    +      + D+G G G   L
Sbjct: 126 VGWAE-HDPALDTGMGSFFQPTYEHRLVPEWLPALTGVTGKLAAGGTVADVGCGVGHTTL 184

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            + K  P     G D S +A+ IA+  A   G+S+R   
Sbjct: 185 LIAKAFPQATVHGFDYSEEAVSIARRLADEAGLSDRVVF 223


>gi|209527308|ref|ZP_03275817.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209492234|gb|EDZ92580.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 442

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-R 149
            ++ + +   ILD G G+G   LAL   +P  K VG+DIS K++E ++     +G+    
Sbjct: 52  QQVIQTEGKVILDAGCGSGYKALALALANPGAKIVGIDISEKSVEASRDRLKYHGIENAE 111

Query: 150 FDTLQSDWFSSVEGLFDVI 168
           F  +  +   S+   FD I
Sbjct: 112 FHAMYIEELPSLGWEFDYI 130


>gi|154412539|ref|XP_001579302.1| methyltransferase [Trichomonas vaginalis G3]
 gi|121913507|gb|EAY18316.1| methyltransferase, putative [Trichomonas vaginalis G3]
          Length = 217

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           FE  P    L    +  +       +   + DLG G G + +A L      +    D+  
Sbjct: 23  FEQYPTPARLAAEVIFDASTLRGDIEGKIVADLGCGCGILSIACLVMGAK-EVHSFDLDP 81

Query: 132 KALEIAKSNAVTNGVSE--RFDTLQSDWFS-SVEGLFDVIVSNPPY 174
            ++E AK N       E       + D      E  FD +V NPP+
Sbjct: 82  VSIEAAKRNLDLLEFDEPPPIFFHECDVTKLGDEQKFDTVVMNPPF 127


>gi|6572629|gb|AAF17329.1|AF139347_1 microcystin synthetase [Microcystis sp. UWOCC AK-1]
 gi|6572631|gb|AAF17330.1|AF139348_1 microcystin synthetase [Microcystis sp. UWOCC AK(GV-)]
          Length = 440

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDSV-LDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKEQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|163848848|ref|YP_001636892.1| type 11 methyltransferase [Chloroflexus aurantiacus J-10-fl]
 gi|222526803|ref|YP_002571274.1| type 11 methyltransferase [Chloroflexus sp. Y-400-fl]
 gi|163670137|gb|ABY36503.1| Methyltransferase type 11 [Chloroflexus aurantiacus J-10-fl]
 gi|222450682|gb|ACM54948.1| Methyltransferase type 11 [Chloroflexus sp. Y-400-fl]
          Length = 199

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 24/129 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R +DLG GTG  C+ L +    ++  GVD   +A+ +A+      GV +R     +D
Sbjct: 36  PPSRAIDLGCGTGRACVWLARA--GWQVDGVDFVPEAIAMAQERVAAAGVGDRVRLFVAD 93

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                    ++   N PY  ++ V C        +P          L  Y    D V R 
Sbjct: 94  A-------TNLAFLNEPYDLAIDVGCGHG---FSEPE---------LYAY---LDEVRRL 131

Query: 217 LNKDGLCSV 225
           L   GL   
Sbjct: 132 LKPGGLFVF 140


>gi|302379709|ref|ZP_07268194.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312616|gb|EFK94612.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Finegoldia magna
           ACS-171-V-Col3]
          Length = 442

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 62  NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +S    F+P P      +     +L          + DL  GTG +     K+S 
Sbjct: 266 GLEFRISPFSFFQPNPAQA---EQIYTRALELAGDLSGKNVYDLYCGTGTIAQIFAKKSE 322

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
               +GV+I  +A+E AK NA  NG++     +  D  + +E     DV+V +PP
Sbjct: 323 --SVIGVEIVEEAVEKAKENAKLNGLTNT-KFICDDCLNFMEKVEKKDVVVLDPP 374


>gi|256810236|ref|YP_003127605.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
 gi|256793436|gb|ACV24105.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
          Length = 383

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 9/93 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL+ A+ N   N +  ++++ ++
Sbjct: 208 KEGDRVLDICCYTGGFSVHAAIR--GAEVVGVDLSKKALKTAEENMELNNIPKDKYEFIE 265

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVD 181
            + F  ++        FDV+V +PP       D
Sbjct: 266 GNAFEVMKEFIEDGEKFDVVVLDPPAFTQTEED 298


>gi|254700801|ref|ZP_05162629.1| methyltransferase [Brucella suis bv. 5 str. 513]
 gi|261751309|ref|ZP_05995018.1| methyltransferase small [Brucella suis bv. 5 str. 513]
 gi|261741062|gb|EEY28988.1| methyltransferase small [Brucella suis bv. 5 str. 513]
          Length = 340

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 287 -------QSFIAAAASRLKPGGRLLM 305


>gi|253583475|ref|ZP_04860673.1| methyltransferase [Fusobacterium varium ATCC 27725]
 gi|251834047|gb|EES62610.1| methyltransferase [Fusobacterium varium ATCC 27725]
          Length = 393

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 24/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            + LD+ + +G   +A LKE+   K   +D    ALE+ + N + NG    F T++ D F
Sbjct: 218 TKFLDVFSSSGGFSMAALKENCK-KVTAIDKEPHALELCRENYILNGFDGDFVTMEGDAF 276

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             ++        FDVI  +PP +     D                    G   +  + D 
Sbjct: 277 LLLKTLVGRNEKFDVITLDPPSLIKRKADI-----------------HKGRDFFFDLCDD 319

Query: 213 VSRHLNKDGLCSV 225
             + LN  G+  V
Sbjct: 320 SFKLLNDGGILGV 332


>gi|188527735|ref|YP_001910422.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
           pylori Shi470]
 gi|188143975|gb|ACD48392.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
           pylori Shi470]
          Length = 382

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 58/172 (33%), Gaps = 37/172 (21%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y + +      F P+     +VD  L        K +   +L+   G G    + LK  
Sbjct: 1   MYQLDIKTLGQVFTPKN----IVDFMLTL------KHNHGSVLEPSAGDG----SFLKRL 46

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
                VG++I  K       NA           L  D+F   +E  FD I+ NPPY++  
Sbjct: 47  KKA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHK 90

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +     E  ++    SL      L  Y    +   +HL   G        +
Sbjct: 91  DIAPSTKEKLNY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 136


>gi|168187956|ref|ZP_02622591.1| SAM-dependent methyltransferase [Clostridium botulinum C str.
           Eklund]
 gi|169294218|gb|EDS76351.1| SAM-dependent methyltransferase [Clostridium botulinum C str.
           Eklund]
          Length = 247

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 29/174 (16%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   ++K     ++DL +GTG V   +  ++      G++I  + +E+A  + 
Sbjct: 33  VDAVLLANFANVKKN--FNVIDLCSGTGIVPFIIAGKTEASNIKGIEIQEEMVEMADRSV 90

Query: 142 VTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPPYI--------ESVIVDCLGLEVRD 189
             N + E+   L  D  +          DV+  NPPY          S  +     EV  
Sbjct: 91  KFNKLEEKVSFLCGDLKNIDVLKKLPKADVVTVNPPYKLANSGIVNPSDKMAIARHEVCC 150

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK 243
                        L     I       L  +    +    ++  D++ +    K
Sbjct: 151 N------------LEDV--IIA-CRTLLKDNKRMYMVHRPDRLADIITLMRKHK 189


>gi|56476248|ref|YP_157837.1| ribosomal protein L11 methyltransferase [Aromatoleum aromaticum
           EbN1]
 gi|56312291|emb|CAI06936.1| Ribosomal protein L11 methyltransferase [Aromatoleum aromaticum
           EbN1]
          Length = 301

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A          +G+DI  KAL+ A  NA  N V+ R      
Sbjct: 162 QPGDSVLDYGCGSGILGIA-AVRLGAGDVLGIDIDDKALDAAHDNAARNHVALRLQ---- 216

Query: 156 DWFSSVEGLFDVIVSN 171
                ++  FDV+V+N
Sbjct: 217 HSRQPLDARFDVVVAN 232


>gi|93005560|ref|YP_579997.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter
           cryohalolentis K5]
 gi|92393238|gb|ABE74513.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychrobacter
           cryohalolentis K5]
          Length = 454

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  ++    T        LA    R++ +    ++++GTG
Sbjct: 180 HYDLGNDMYQRFLDDTMMYSSAVYKKVDTTLAEAQQHKLALICERLQLKPEDTVIEIGTG 239

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G   +               IS    E A+      G+S++   L+ D +  + G +D 
Sbjct: 240 WGGFAIYAATHY-GCHITTTTISDAQYEEAQRRVEAAGLSDKVTLLKQD-YRELTGQYDK 297

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDG------GIDGLSHYRTI------------ 209
           +VS              +E    +   +            GL   + I            
Sbjct: 298 LVS-----------IEMIEAVGHEYLPTFFAKCNSLLKPTGLMVLQAITFNDQNYQDYIK 346

Query: 210 -ADGVSRHLNKDGLCSVEIGYNQK---------VDVVRIFESRKLFLVNAFKD 252
             D +  H+   G        NQ+           V++             +D
Sbjct: 347 SVDFIQTHIFPGGCLL----SNQELTTQFTEQTDMVIKQLHDYGFDYAFTLRD 395


>gi|257452002|ref|ZP_05617301.1| hypothetical protein F3_02980 [Fusobacterium sp. 3_1_5R]
 gi|317058551|ref|ZP_07923036.1| DNA modification methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684227|gb|EFS21062.1| DNA modification methyltransferase [Fusobacterium sp. 3_1_5R]
          Length = 481

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 78/198 (39%), Gaps = 28/198 (14%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF------FKG 124
            + P  E++ +   A  ++ P+++     ++ DL  G G + ++              + 
Sbjct: 8   IYTPIQESKQIAKLAFTYAPPKVKW----KLADLSCGNGNLLVSFAGYMKEQNRMIPIQY 63

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G DI  KA+  A+ N + N     + + +   F   E  FD+I+ NPPY+       + 
Sbjct: 64  YGYDIDEKAIIEAR-NRLLN--ENCYFSCEDSLFLGKEKKFDIILGNPPYLGEKNHKEIF 120

Query: 185 LEVRDFDPRISLDGGI--DG-LSHYRTIADGVSRHLNKDGLC-SVEIGY----NQKVDVV 236
            +++  +      G    +G + +     +     L ++G+   +   Y    +    + 
Sbjct: 121 DDLKKTE-----FGKKYYEGKMDYLYFFIEKAIDLLEEEGILVYLTTDYWLVADGAKTLR 175

Query: 237 RIFESRKLFLVNAFKDYG 254
           RI +    FL   F+DY 
Sbjct: 176 RILKKEGEFL--YFQDYN 191


>gi|254522241|ref|ZP_05134296.1| cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas sp.
           SKA14]
 gi|219719832|gb|EED38357.1| cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas sp.
           SKA14]
          Length = 416

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++      R++++GTG G   +               IS +   +A       G
Sbjct: 176 LDRICQQLRLSPGDRVVEIGTGWGGFAVHAATHY-GCHVTTTTISAEQHALAAERVQAAG 234

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +R   L  D +  ++G FD +VS        +++ +G E                L  
Sbjct: 235 LQDRVTLLMQD-YRDLQGQFDKLVS------IEMIEAIGAEY---------------LDT 272

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y      + R L  DG+  +
Sbjct: 273 Y---MATLQRLLKPDGVALL 289


>gi|149642929|ref|NP_001092605.1| methyltransferase-like protein 5 [Bos taurus]
 gi|148753330|gb|AAI42085.1| METTL5 protein [Bos taurus]
 gi|296490652|gb|DAA32765.1| methyltransferase like 5 [Bos taurus]
          Length = 209

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   + DLG G G + +            G DI   ALEI   N     ++   D +Q D
Sbjct: 51  ENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNVEEFELT-NVDVVQCD 108

Query: 157 WFS---SVEGLFDVIVSNPPY 174
             S    +   FD ++ NPP+
Sbjct: 109 VCSLSNRMSKSFDTVIMNPPF 129


>gi|110679556|ref|YP_682563.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
           denitrificans OCh 114]
 gi|109455672|gb|ABG31877.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter
           denitrificans OCh 114]
          Length = 402

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 9/147 (6%)

Query: 30  LDDRQRFFLTN-AIVRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDS 84
           L ++ RF+L      ++ K+ S H  LG  DFY + L    T SS  FE   E+     +
Sbjct: 113 LFEKLRFWLQRNHKAQARKNISYHYDLGN-DFYGLWLDDSMTYSSALFETGQESLEAAQT 171

Query: 85  ALAFSL-PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           A    +   +  +    IL++G G G       KE    +   + IS +  + AK     
Sbjct: 172 AKYKLMVDEMGAKPGDHILEIGCGWGGFAEYAAKER-GLRVTCLTISEEQFKYAKERIEK 230

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVS 170
            G+S+  +    D+     G +D I S
Sbjct: 231 AGLSDLVEFKLQDYRDE-SGSYDGIAS 256


>gi|81300217|ref|YP_400425.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
 gi|81169098|gb|ABB57438.1| membrane-associated protein [Synechococcus elongatus PCC 7942]
          Length = 213

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 31/162 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
             T+ + +++ R +    + + +  +L RI       +LDLG GTG++   L  + P  K
Sbjct: 13  EYTILASSYDRRWDFY--IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVK 70

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
             G+DIS   L IA+        S +  T +++     E  FD+++S      + +    
Sbjct: 71  LSGLDISAAMLAIAR---QKLPDSVKLQTGEANELPFPEHHFDLVIS------TSVFHYF 121

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                    +   ++R L   G   +
Sbjct: 122 QNP--------------------EKVLQEITRVLKPQGCLIL 143


>gi|23008328|ref|ZP_00049820.1| COG2264: Ribosomal protein L11 methylase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 305

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +  +++R   RILD+GTGTG +  A  +       V  D+  +A+  A+ NA  NG
Sbjct: 146 LRALVAELKQRRPARILDVGTGTGILGFAAARAL-HIPVVAGDLDPEAVTTARGNARLNG 204

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
           +       Q        ++    FDV+ +N
Sbjct: 205 LGPLMRLYQGPGVRHALANRPRGFDVVFAN 234


>gi|312898002|ref|ZP_07757411.1| ribosomal protein L11 methyltransferase [Megasphaera
           micronuciformis F0359]
 gi|310620927|gb|EFQ04478.1| ribosomal protein L11 methyltransferase [Megasphaera
           micronuciformis F0359]
          Length = 291

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 39/132 (29%), Gaps = 33/132 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    + D+GTGTG + +A  K          D   +A+E A+ N   N        + S
Sbjct: 150 KQGQVVYDVGTGTGILAIAAAK-CGASTVRAGDYDEQAVEQARLNIKLNAADACTTLVVS 208

Query: 156 DWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           D    +       D+IV N                        L            +   
Sbjct: 209 DLLEQMVPRGEKADLIVGN------------------------LV-----TDLILRLLPN 239

Query: 213 VSRHLNKDGLCS 224
           +  +L + GL  
Sbjct: 240 LKDYLKEGGLFI 251


>gi|297204789|ref|ZP_06922186.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sviceus
           ATCC 29083]
 gi|197712498|gb|EDY56532.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sviceus
           ATCC 29083]
          Length = 447

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     ++  R   R+LD+G G G++ L         + VGV IS +   +A+    
Sbjct: 196 EAKLDLVCRKLALRKGQRLLDVGCGWGSMALHAAGRY-GVQVVGVTISDEQAALARERVA 254

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+    +    D+    +  FD I S            +   V          GG   
Sbjct: 255 AAGLEHLVEIRVQDYRQIDDSPFDAISS----------IGMAEHV----------GGKR- 293

Query: 203 LSHYRTIADGVSRHLNKDGLCS 224
              YR  AD + + L   G   
Sbjct: 294 ---YREYADILHQLLKPGGRLL 312


>gi|218780743|ref|YP_002432061.1| ribosomal protein L11 methyltransferase [Desulfatibacillum
           alkenivorans AK-01]
 gi|226710071|sp|B8FBE9|PRMA_DESAA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|218762127|gb|ACL04593.1| ribosomal protein L11 methyltransferase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 310

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L        K+   R LD+GTG+G + +    +    K  G D    ALE A  N   N 
Sbjct: 160 LEMIETECLKKAPERFLDVGTGSGILMIG-AYKLGARKVFGCDNDMDALEAAAKNLKGNQ 218

Query: 146 VSE-RFDTLQSDWFSSV-EGLFDVIVSN 171
           V E  F     D  + + EG FD++ +N
Sbjct: 219 VHEGDFGLWLGDLLAGIVEGAFDMVAAN 246


>gi|116334207|ref|YP_795734.1| tRNA (uracil-5-)-methyltransferase related enzyme [Lactobacillus
           brevis ATCC 367]
 gi|116099554|gb|ABJ64703.1| tRNA (uracil-5-)-methyltransferase related enzyme [Lactobacillus
           brevis ATCC 367]
          Length = 457

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S+ +F      +   +     ++ +        ++D   G G + LAL K + 
Sbjct: 273 MGLTFAISARSFYQVNPQQT--EKLYQMAIDKAGLTGAETVIDAYCGIGTISLALAKHAK 330

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPP 173
             +  GV+I  +A+E AK NA  N +S     +     Q   + +     DVIV +PP
Sbjct: 331 --QVYGVEIVPEAIEDAKVNAQKNHLSNVTFAVNKAEDQMAEWQAAGIKPDVIVVDPP 386


>gi|330826370|ref|YP_004389673.1| 50S ribosomal protein L11 methyltransferase [Alicycliphilus
           denitrificans K601]
 gi|329311742|gb|AEB86157.1| Ribosomal protein L11 methyltransferase [Alicycliphilus
           denitrificans K601]
          Length = 298

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           + + R+LD G G+G + +   K         VDI   A+E  + NA+ NGV      L +
Sbjct: 167 KALGRVLDYGCGSGILAIGAAK-FGALDIDAVDIDPAAVEATRQNALANGVY-----LNA 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G +  +++N
Sbjct: 221 GLPEQAQGQYQTVLAN 236


>gi|326917640|ref|XP_003205104.1| PREDICTED: trimethylguanosine synthase-like [Meleagris gallopavo]
          Length = 887

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 18/174 (10%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   ++   +  +   I+D   G G   +     S   + + VDI  + L +A+SNA   
Sbjct: 714 AEHIAVRVAQSFNCNTIVDAFCGVGGNAIQFALTSK--RVIAVDIDPEKLSLARSNAEVY 771

Query: 145 GVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV+ + + +  D+   + +   DV+  +PP+      D    E+ D    I      DG 
Sbjct: 772 GVANQIEFVCGDFMVLAADLKADVVFLSPPW---GGPDYATAEIFDIQTMIC----PDGF 824

Query: 204 SHYRT-------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             +R        I   + R+ + + + S+  G   KV++ + F + KL  + A+
Sbjct: 825 EIFRLSKKITNNIVYFLPRNADVNQIASL-AGPGGKVEIEQNFLNNKLKTITAY 877


>gi|317182210|dbj|BAJ59994.1| Type II modification enzyme [Helicobacter pylori F57]
          Length = 383

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K++   +L+   G G    + LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KQNHGSVLEPSAGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E  ++    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSAKEKLNY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|227329295|ref|ZP_03833319.1| 23S rRNA methyluridine methyltransferase [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 375

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  V L +   +F    +T   V +AL A +   + + D+  + DL  G G   L     
Sbjct: 198 FNQVPLYIRPQSFF---QTNPQVAAALYATARDWVAELDITSMWDLFCGVGGFGLHCA-- 252

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS-SVEGLFDVIVSNPP 173
           SP  +  G++IS +A+  A+ +A   G+    F  L S  F+ +   + D+++ NPP
Sbjct: 253 SPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKAEIPDLVLVNPP 309


>gi|213385126|dbj|BAG84254.1| putative O-methyltransferase [Streptomyces griseoviridis]
          Length = 362

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 32/172 (18%)

Query: 58  RDFYNVRLTLSSDTFEPRPETEL--LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           R+     L     T   R    +  LV  A+  S+PR      VR+L++G G+G      
Sbjct: 149 REGRRFSLADQDGTVIARSTQVVTPLVHEAITHSVPRT---GPVRLLEIGCGSGVHVRHA 205

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVS-NPP 173
              +P    + VD+  +  +    N    G+++R +  Q D  +  +E  FD++   N  
Sbjct: 206 ASLNPHLTALAVDLQAEVAKQCAENIEDWGLADRVEVTQGDLRTLDLEPQFDLVTMHNNI 265

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           Y  +             +   +L                    L   G   V
Sbjct: 266 YYFAED-----------ERVEAL--------------RRARELLTPGGRLLV 292


>gi|78046987|ref|YP_363162.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78035417|emb|CAJ23062.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 431

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 188 LERICQKLRLAPHHHVVEIGTGWGGFALYAAREH-GCRVTTTTISREQFELANQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLRD-YRDLEGRFDRVVS 270


>gi|326781237|ref|ZP_08240502.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326661570|gb|EGE46416.1| rRNA (guanine-N(2)-)-methyltransferase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 384

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 27/150 (18%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTL 153
           +   VR++DLG G G + L+    +P      VD S  A+  A+           +   L
Sbjct: 237 RSGAVRVVDLGCGNGVLGLSAAVANPDAHLTFVDESYGAVASAEETFRAGAPAGAKAAFL 296

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             D  + ++ G  D++++NPP+                   ++        +  RT+  G
Sbjct: 297 VGDGLADLDPGSVDLVLNNPPFHS----------------HLATT-----DATARTMFAG 335

Query: 213 VSRHLNKDGLCSVEIGYNQ---KVDVVRIF 239
               L + G   V +G         + RIF
Sbjct: 336 AKTALRQGGELWV-VGNRHLSYHTHLRRIF 364


>gi|292655251|ref|YP_003535148.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2]
 gi|291370660|gb|ADE02887.1| protein-L-isoaspartate O-methyltransferase [Haloferax volcanii DS2]
          Length = 208

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 10/106 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +      +LDLGTGTGA+ LAL    P   + VG DIS   LE A++ A   G+ E  + 
Sbjct: 40  DPSPEDVVLDLGTGTGAIALALA---PDAKRVVGRDISEGMLEQARTKAAEVGI-ENVEF 95

Query: 153 LQSDWFSSV---EGLFDVIVSNPP--YIESVIVDCLGLEVRDFDPR 193
            +  +       +   D++V+N    ++           + D +PR
Sbjct: 96  DEGRFRDPNVGDDEQIDIVVTNFAMHHLSDEEKREAIGVIADLEPR 141


>gi|260431119|ref|ZP_05785090.1| ribosomal protein L11 methyltransferase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414947|gb|EEX08206.1| ribosomal protein L11 methyltransferase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 290

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 42/187 (22%)

Query: 74  PRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF                          ++ D+G GT  + +A  + 
Sbjct: 110 PEGRIPLLIEAAMAFGTGHHGTTLGCLRALDKLIETGFAASKVADIGCGTAVLAMAAARV 169

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                 +  DI   A+E+A++N   NG++     +++  F   E     +++  PY    
Sbjct: 170 WEG-DILASDIDQVAVEVAEANLKANGMAGAVRCVEAAGFDHPE-----LLAAAPY---- 219

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVR 237
             D +   +    P I+L             A  ++++L   G   +  I   Q  +V  
Sbjct: 220 --DLIFANILKG-PLIAL-------------APEIAQYLRSGGYAILSGILNEQADEVES 263

Query: 238 IFESRKL 244
           ++     
Sbjct: 264 VYARNGF 270


>gi|228995690|ref|ZP_04155353.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17]
 gi|229003319|ref|ZP_04161149.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4]
 gi|228757937|gb|EEM07152.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock1-4]
 gi|228764067|gb|EEM12951.1| Uncharacterized RNA methyltransferase [Bacillus mycoides Rock3-17]
          Length = 465

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 52  HRILGWRDF-YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             I    DF  +++  +S+ +F    R +T++L D AL ++    +      ++D   G 
Sbjct: 277 EYIY---DFIGDIKFAISARSFYQVNREQTKVLYDKALEYA----KLDGNETVIDAYCGI 329

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVE 162
           G++ L L +++   K  GV+I  +A+E A  NA  N ++         + +  +W+    
Sbjct: 330 GSISLFLAQKAK--KVYGVEIVPEAIEDANRNAALNNMTNAEFAVGEAEVVIPNWYKE-G 386

Query: 163 GLFDVIVSNPP 173
            + D IV +PP
Sbjct: 387 VIADTIVVDPP 397


>gi|52424588|ref|YP_087725.1| ribosomal protein L11 methyltransferase [Mannheimia
           succiniciproducens MBEL55E]
 gi|60390343|sp|Q65V70|PRMA_MANSM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|52306640|gb|AAU37140.1| PrmA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 293

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 77/189 (40%), Gaps = 36/189 (19%)

Query: 3   ALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE------SIHRILG 56
           AL D+       T +     ++  +  LD+   + +     +  + E       +     
Sbjct: 58  ALFDAE------TDMQQIVRLLRQEGHLDENTAYKIEQIEDKDWEREWMDNFHPMQ---- 107

Query: 57  WRDFYNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDVV--RIL 102
               +  RL +     E P P    +++D  LAF           L  ++  D+    ++
Sbjct: 108 ----FGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTALCLEWLDGLDLAGKTVI 163

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           D G G+G + +A LK     + +G+DI  +A+  +++NA  NGV++R     S+      
Sbjct: 164 DFGCGSGILAIAALKLGAK-EAIGIDIDPQAILASRNNAEQNGVADRLKLYLSE-DKPAN 221

Query: 163 GLFDVIVSN 171
              +V+V+N
Sbjct: 222 MKAEVVVAN 230


>gi|303256679|ref|ZP_07342693.1| ribosomal protein L11 methyltransferase [Burkholderiales bacterium
           1_1_47]
 gi|330999319|ref|ZP_08323036.1| ribosomal protein L11 methyltransferase [Parasutterella
           excrementihominis YIT 11859]
 gi|302860170|gb|EFL83247.1| ribosomal protein L11 methyltransferase [Burkholderiales bacterium
           1_1_47]
 gi|329575177|gb|EGG56728.1| ribosomal protein L11 methyltransferase [Parasutterella
           excrementihominis YIT 11859]
          Length = 299

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T L ++     +L      +   +LD G G+G + +A  K+    K +G DI  +A+E
Sbjct: 149 PTTRLCLEWLHDHNL------EGKSVLDYGCGSGILAVA-AKKLGASKVLGTDIDPQAIE 201

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            A  NA  N     F   +       +  FDV+V+N
Sbjct: 202 AADYNAEVNRADASFYLPKDM----PDEKFDVVVAN 233


>gi|294626918|ref|ZP_06705509.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292598778|gb|EFF42924.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 426

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 183 LERICQKLRLAPHHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELANQRIAAAG 241

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 242 LSDRVTVLLRD-YRDLEGRFDRVVS 265


>gi|239983770|ref|ZP_04706294.1| putative methyltransferase [Streptomyces albus J1074]
 gi|291455575|ref|ZP_06594965.1| methyltransferase [Streptomyces albus J1074]
 gi|291358524|gb|EFE85426.1| methyltransferase [Streptomyces albus J1074]
          Length = 293

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 29/152 (19%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           +  +L D     +     +    RILDLG GTGA   ALL + P  +   VD S   L  
Sbjct: 35  DAHVLADHLAGLARWLPLQAPPTRILDLGCGTGAGTFALLGQFPEARVTAVDTSAAHLRR 94

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
               A   G+++R  T+++D  ++     G  D++ +      S  +  +        P 
Sbjct: 95  LDEKARERGLADRVRTVEADLDAADWPGLGTPDLVWA------SASLHHMAH------PD 142

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +L                V   L   GL +V
Sbjct: 143 RAL--------------RQVHDLLAPGGLLAV 160


>gi|257066487|ref|YP_003152743.1| RNA methyltransferase, TrmA family [Anaerococcus prevotii DSM
           20548]
 gi|256798367|gb|ACV29022.1| RNA methyltransferase, TrmA family [Anaerococcus prevotii DSM
           20548]
          Length = 457

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   +   +S  +F  +P      +     +         + +LDL +GTG +   + + 
Sbjct: 276 EMLGLTFNISPFSF-FQPNIYT-AEKLYQKAFDLANINQSMDVLDLYSGTGTITQVMAQR 333

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP 173
           +      G++I  +A++ A  NA  N + +  + L  D    +E     +DVI+ +PP
Sbjct: 334 ARTA--TGIEIVEEAIDKAWENAKINEI-DNINFLCGDVLEEIEKVGDKYDVIILDPP 388


>gi|254488697|ref|ZP_05101902.1| ribosomal protein L11 methyltransferase [Roseobacter sp. GAI101]
 gi|214045566|gb|EEB86204.1| ribosomal protein L11 methyltransferase [Roseobacter sp. GAI101]
          Length = 290

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G GT  + +A  +  P    +  DI   A+++A++NA  N +S+R   +++  F  
Sbjct: 152 VADIGCGTAVLAMAAARIWPNP-VLASDIDEVAVDVARANAEANELSDRLICVEAAGFDH 210

Query: 161 VE----GLFDVIVSN 171
            +      FD+I +N
Sbjct: 211 PDLAAKAPFDLIFAN 225


>gi|146085495|ref|XP_001465291.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134069388|emb|CAM67541.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 603

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 10/100 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++ +       E      +LDL +GTG + L L K     + +G+++   A+  A+ NA
Sbjct: 387 METMMMKVAEVAELSAGTTLLDLCSGTGTIGLTLSKHVK--RVIGIELVESAVANARRNA 444

Query: 142 VTNGVSE------RFDTLQSDWFSSV--EGLFDVIVSNPP 173
             NG++       R + L     S +  E   D++V   P
Sbjct: 445 QQNGITNTEFHCGRVEHLLPSVISGLPAEDRGDIVVILDP 484


>gi|148555616|ref|YP_001263198.1| putative methyltransferase [Sphingomonas wittichii RW1]
 gi|148500806|gb|ABQ69060.1| putative methyltransferase [Sphingomonas wittichii RW1]
          Length = 173

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 69/203 (33%), Gaps = 40/203 (19%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           +  R  ++      RP ++   ++  +    RI   + + + D+  GTGA+ L       
Sbjct: 8   WRGRPLIAPQGQATRPTSDRTREALFSMLASRIGSFEGLAVADVCAGTGALGLE-ALSRG 66

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +   V+    A+E  ++N    G       + ++ F+   G +D+++ +PPY   +  
Sbjct: 67  AARCTFVERDRAAVEALRANIAKLGAEAEVRAIAAESFAG--GAYDLVLIDPPYGTGLGQ 124

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
             L                  G              L   G  S+E   ++ V V     
Sbjct: 125 KVLP---------------AIG--------------LAPGGWASIETARDEAVAV----- 150

Query: 241 SRKLFLVNAFKDYGGNDRVLLFC 263
               F V   + + G  R+ L  
Sbjct: 151 --PGFTVEVERVH-GKARITLLR 170


>gi|14600803|ref|NP_147325.1| putative methyltransferase [Aeropyrum pernix K1]
 gi|5104210|dbj|BAA79525.1| putative methyltransferase [Aeropyrum pernix K1]
          Length = 354

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           RD   ILD   G G V +         +   VD++ +    A+ NA +  V  R +    
Sbjct: 199 RDGDTILDPMCGGGTVAVEAALLFETSRVYCVDLNPRHTRGARLNAESARVGGRVEVYTW 258

Query: 156 D--WFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           D      +  E   D IVSNPPY    I     ++VR                 YR    
Sbjct: 259 DARMLHELLGEDSVDRIVSNPPY---GIRLGDPVDVRI---------------LYREFMP 300

Query: 212 GVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
             +R L   G  ++         +V    S  L +  A +
Sbjct: 301 SAARVLRSGGRAAIITAET--KALVAAARSSGLRMAGARR 338


>gi|302560260|ref|ZP_07312602.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           griseoflavus Tu4000]
 gi|302477878|gb|EFL40971.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           griseoflavus Tu4000]
          Length = 435

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 32/173 (18%)

Query: 59  DFYNVRL---TLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAV 111
           DFY + L    + S  + P P     ++ A    L  + ++       R+LD+G G G++
Sbjct: 158 DFYELVLGPSMVYSCAYWPAPPPRGTLEQAQHDKLELVARKLALEPGRRLLDVGCGWGSM 217

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            +   ++      VGV +S +    A+      G+++R +    D+    +G +D I S 
Sbjct: 218 AVHAARDH-GVDVVGVTLSQEQAAYARKRVADEGLTDRIEIRVQDYRDVTDGPYDAISS- 275

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                 + +       R  +   +L                  R L   G   
Sbjct: 276 ------IGMAEHVGSRRYLEYATAL-----------------HRLLKPGGRLL 305


>gi|284991436|ref|YP_003409990.1| methylase of polypeptide chain release factors-like protein
           [Geodermatophilus obscurus DSM 43160]
 gi|284064681|gb|ADB75619.1| Methylase of polypeptide chain release factors-like protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 238

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 15/116 (12%)

Query: 101 ILDLGTGTGAVCLA-LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           +++LGTG  A  +A ++   P  +    DIS  ++E A+ N    GV++R+     D+F 
Sbjct: 35  VVELGTGD-ATAIADVVAGLPELRVRSFDISAPSVERARENIAARGVADRYTVEFGDFFD 93

Query: 160 SVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
             +         +++NPPYI +   D    E         L GG+ G      +  
Sbjct: 94  RADSAAGPSASTVIANPPYIPAPDRDIRMPE---------LWGGVYGNDLVLQLLK 140


>gi|167839725|ref|ZP_02466409.1| hypothetical protein Bpse38_23849 [Burkholderia thailandensis
           MSMB43]
          Length = 269

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 54/176 (30%), Gaps = 41/176 (23%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
             LG       RL   S+  +P               L     R  +R+LD+G GTG V 
Sbjct: 4   YTLGHSPIELRRLDFQSEMLKP----------VTRRLLESARLRPSMRVLDIGCGTGGVS 53

Query: 113 -LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL--FDVIV 169
            LA     P    V +D S  A+E A +NA    +        S     VEG   FDV+V
Sbjct: 54  MLAAEMAGPTGTVVAIDPSDVAIEAASANAERASL-HNIRFRASGL-DQVEGAHGFDVVV 111

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +                V       +                  +R +   G  ++
Sbjct: 112 A--------------RYVLIHQLHAA------------EFVRHAARFVKPGGYLAL 141


>gi|23503017|ref|NP_699144.1| methyltransferase [Brucella suis 1330]
 gi|225626534|ref|ZP_03784573.1| methyltransferase [Brucella ceti str. Cudo]
 gi|254705169|ref|ZP_05166997.1| methyltransferase [Brucella suis bv. 3 str. 686]
 gi|254707315|ref|ZP_05169143.1| methyltransferase [Brucella pinnipedialis M163/99/10]
 gi|254709145|ref|ZP_05170956.1| methyltransferase [Brucella pinnipedialis B2/94]
 gi|254713430|ref|ZP_05175241.1| methyltransferase [Brucella ceti M644/93/1]
 gi|254716213|ref|ZP_05178024.1| methyltransferase [Brucella ceti M13/05/1]
 gi|256030670|ref|ZP_05444284.1| methyltransferase [Brucella pinnipedialis M292/94/1]
 gi|256158671|ref|ZP_05456554.1| methyltransferase [Brucella ceti M490/95/1]
 gi|256254075|ref|ZP_05459611.1| methyltransferase [Brucella ceti B1/94]
 gi|256370565|ref|YP_003108076.1| methyltransferase [Brucella microti CCM 4915]
 gi|260169574|ref|ZP_05756385.1| methyltransferase [Brucella sp. F5/99]
 gi|261217987|ref|ZP_05932268.1| methyltransferase small [Brucella ceti M13/05/1]
 gi|261221216|ref|ZP_05935497.1| methyltransferase [Brucella ceti B1/94]
 gi|261314797|ref|ZP_05953994.1| methyltransferase small [Brucella pinnipedialis M163/99/10]
 gi|261316644|ref|ZP_05955841.1| methyltransferase small [Brucella pinnipedialis B2/94]
 gi|261321163|ref|ZP_05960360.1| methyltransferase small [Brucella ceti M644/93/1]
 gi|261755874|ref|ZP_05999583.1| methyltransferase small [Brucella suis bv. 3 str. 686]
 gi|261759101|ref|ZP_06002810.1| methyltransferase small [Brucella sp. F5/99]
 gi|265987716|ref|ZP_06100273.1| methyltransferase [Brucella pinnipedialis M292/94/1]
 gi|265997177|ref|ZP_06109734.1| methyltransferase [Brucella ceti M490/95/1]
 gi|23349058|gb|AAN31059.1| methyltransferase [Brucella suis 1330]
 gi|225618191|gb|EEH15234.1| methyltransferase [Brucella ceti str. Cudo]
 gi|256000728|gb|ACU49127.1| methyltransferase [Brucella microti CCM 4915]
 gi|260919800|gb|EEX86453.1| methyltransferase [Brucella ceti B1/94]
 gi|260923076|gb|EEX89644.1| methyltransferase small [Brucella ceti M13/05/1]
 gi|261293853|gb|EEX97349.1| methyltransferase small [Brucella ceti M644/93/1]
 gi|261295867|gb|EEX99363.1| methyltransferase small [Brucella pinnipedialis B2/94]
 gi|261303823|gb|EEY07320.1| methyltransferase small [Brucella pinnipedialis M163/99/10]
 gi|261739085|gb|EEY27081.1| methyltransferase small [Brucella sp. F5/99]
 gi|261745627|gb|EEY33553.1| methyltransferase small [Brucella suis bv. 3 str. 686]
 gi|262551645|gb|EEZ07635.1| methyltransferase [Brucella ceti M490/95/1]
 gi|264659913|gb|EEZ30174.1| methyltransferase [Brucella pinnipedialis M292/94/1]
          Length = 340

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 287 -------QSFIAAAASRLKPGGRLLM 305


>gi|319957419|ref|YP_004168682.1| (LSU ribosomal protein l11p)-lysine n-methyltransferase
           [Nitratifractor salsuginis DSM 16511]
 gi|319419823|gb|ADV46933.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Nitratifractor salsuginis DSM 16511]
          Length = 277

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 26/160 (16%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE-TELLVD 83
           D    + + ++  +          + I               +  + + P+ E   +L++
Sbjct: 64  DFPLEISEEEKENVDWIQAYQDSVQPIEA---------GPFYIHPEWYPPKEEKINILIN 114

Query: 84  SALAFSLPRIEKR------------DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            ALAF                       R+LD+G G+G   LAL            D   
Sbjct: 115 PALAFGSGHHATTYSCLEAIAEYVTPQDRLLDVGCGSGI--LALAARKLGATVELCDTDP 172

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            A+E A  N   N   ERF+ +        +  + V+V+N
Sbjct: 173 LAVESAAENFRLN--DERFEKIWEGSAHKTDQKYTVVVAN 210


>gi|308062317|gb|ADO04205.1| cyclopropane fatty acid synthase [Helicobacter pylori Cuz20]
          Length = 389

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 34/214 (15%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV----RLTLSSDTFEP 74
           S  +  + + +        +   I R   + S H  LG  DFY++     L+ S   F+ 
Sbjct: 80  SLYLQTNYEHLHKHDNAKAIQKPI-RESSNISKHYDLGN-DFYSIWLDETLSYSCAYFKK 137

Query: 75  RPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
             +T        L  +L ++  +   ++LD+G G G + +   +E    + +G+ IS + 
Sbjct: 138 DDDTLHTAQLQKLDHTLKKLHLKPGEKLLDIGCGWGYLSIKAAQEY-GAQVMGITISSEQ 196

Query: 134 LEIAKSNAVTNGVSERFDT--LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            + A       G+ ++     L           FD +VS                V  F+
Sbjct: 197 YKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVS----------------VGMFE 240

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +    G D L  Y      V   L + G+  +
Sbjct: 241 -HV----GKDNLPFY---FKKVKEVLKRGGMFLL 266


>gi|326778890|ref|ZP_08238155.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces cf.
           griseus XylebKG-1]
 gi|326659223|gb|EGE44069.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces cf.
           griseus XylebKG-1]
          Length = 434

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  +   R+LD+G G G++ +   +E    +  GV +S +    A+      G
Sbjct: 186 LDLVCRKLGLKKGDRLLDVGCGWGSMAIHAAREY-GARVTGVTLSREQAAHARKRIAEEG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 245 LTDRIEIRVQDYRDVGDGPYDAISS-------IGMAEHVGSVR----------------- 280

Query: 206 YRTIADGVSRHLNKDGLCS 224
           YR  A+ +   L   G   
Sbjct: 281 YREYAEDLYALLKPGGRLL 299


>gi|226950293|ref|YP_002805384.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A2 str. Kyoto]
 gi|226843642|gb|ACO86308.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A2 str. Kyoto]
          Length = 450

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       +LDL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVLDLYCGTGTIG 322

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+    + +  D       V+   D+I
Sbjct: 323 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDII 378

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 379 ILDPP---RPGVHPVALEYVVKFEPK 401


>gi|226953148|ref|ZP_03823612.1| possible cyclopropane-fatty-acyl-phospholipid synthase
           [Acinetobacter sp. ATCC 27244]
 gi|226836100|gb|EEH68483.1| possible cyclopropane-fatty-acyl-phospholipid synthase
           [Acinetobacter sp. ATCC 27244]
          Length = 362

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 49/153 (32%), Gaps = 41/153 (26%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK----ALEIAK 138
           + AL     R +  D   IL+LG G G++ L + +  P  K   V  S       L  A 
Sbjct: 116 EFALQLYCERAQLHDGQDILELGCGWGSLTLWMAERYPNAKITAVSNSATQREHILSQAS 175

Query: 139 ----SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
               +N            L SD        FD +VS            +   VR+++   
Sbjct: 176 TRKLNNIEVLTCDVNVLELDSD-------RFDRVVSV----------EMFEHVRNYE--- 215

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                         + + + R L  DGL    I
Sbjct: 216 -------------KLFEKIHRWLKADGLLWCHI 235


>gi|163844183|ref|YP_001628588.1| methyltransferase small [Brucella suis ATCC 23445]
 gi|163674906|gb|ABY39017.1| methyltransferase small [Brucella suis ATCC 23445]
          Length = 340

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFYEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 287 -------QSFIAAAASRLKPGGRLLM 305


>gi|148688457|gb|EDL20404.1| RIKEN cDNA 4732479N06, isoform CRA_b [Mus musculus]
 gi|148688458|gb|EDL20405.1| RIKEN cDNA 4732479N06, isoform CRA_b [Mus musculus]
          Length = 493

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 19/142 (13%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G      D   +++ +S D F    +        L   +  +   + 
Sbjct: 277 RCSHQQSPYQLLFGEPHIFEDLLGLKIRISPDAFF---QINTAGAEMLYRIIGELSGVNS 333

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             +L D+  GTG + L+L + +   +  G+++  +A+E A+  A  NGV+       R +
Sbjct: 334 ESLLLDICCGTGVIGLSLAQRA--SQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAE 391

Query: 152 TLQSDWF-SSVEGLFDVIVSNP 172
           T+      S  +    V V NP
Sbjct: 392 TILPQLLKSQKDEKLTVAVVNP 413


>gi|146309213|ref|YP_001189678.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp]
 gi|145577414|gb|ABP86946.1| SAM-dependent methyltransferase [Pseudomonas mendocina ymp]
          Length = 399

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LDL +  G   +         +   VD S  AL+  + NA  NG +E+   ++ D
Sbjct: 221 KGKRVLDLFSYIGGWGVQ-AAAFGASEVFCVDASGFALDGVERNATLNGFAEKITCVEGD 279

Query: 157 WFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F+++      E  FDV++++PP       D                   +G + YR + 
Sbjct: 280 VFAALRELKSAEERFDVVIADPPAFIKRKKDI-----------------KNGEAAYRRLN 322

Query: 211 DGVSRHLNKDGLCS 224
           +   R LNKDG+  
Sbjct: 323 EIAMRLLNKDGILV 336


>gi|27379183|ref|NP_770712.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
 gi|27352334|dbj|BAC49337.1| replicative DNA helicase [Bradyrhizobium japonicum USDA 110]
          Length = 418

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 27/148 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +   R+LD+G+G G + L L  E+      G+ +S + L++A + A   G++
Sbjct: 164 HIAAKLRVKGGERVLDIGSGWGGLGLYLA-ETAGADVTGITLSSEQLQLANARAAEKGLT 222

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                L  D +  ++G FD IVS            +   V              G+  Y 
Sbjct: 223 RSAKFLLQD-YRDIDGPFDRIVSV----------GMLEHV--------------GVRFYD 257

Query: 208 TIADGVSRHLNKDGLCSVE-IGYNQKVD 234
                 +  LN+DG+  +  IG +Q  D
Sbjct: 258 AYFQRCAELLNEDGVMMLHSIGRSQGPD 285


>gi|297380216|gb|ADI35103.1| Uncharacterized methyltransferase in lpd-3 5'region [Helicobacter
           pylori v225d]
          Length = 389

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 34/214 (15%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV----RLTLSSDTFEP 74
           S  +  + + +        +   I R   + S H  LG  DFY++     L+ S   F+ 
Sbjct: 80  SLYLQTNYEHLHKHDNAKAIQKPI-RESSNISKHYDLGN-DFYSIWLDETLSYSCAYFKK 137

Query: 75  RPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
             +T        L  +L ++  +   ++LD+G G G + +   +E    + +G+ IS + 
Sbjct: 138 DDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGCGWGYLSIKAAQEY-GAQVMGITISSEQ 196

Query: 134 LEIAKSNAVTNGVSERFDT--LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            + A       G+ ++     L           FD +VS                V  F+
Sbjct: 197 YKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVS----------------VGMFE 240

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +    G D L  Y      V   L + G+  +
Sbjct: 241 -HV----GKDNLPFY---FKKVKEVLKRGGMFLL 266


>gi|149730714|ref|XP_001498013.1| PREDICTED: similar to Methyltransferase-like protein 5 [Equus
           caballus]
          Length = 209

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D  S    +   FD ++ NPP+
Sbjct: 97  FELT-NVDMIQCDVCSLSNRMSKSFDTVIMNPPF 129


>gi|327393298|dbj|BAK10720.1| 23S rRNA uracil-5- methyltransferase RumB [Pantoea ananatis
           AJ13355]
          Length = 380

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 10/137 (7%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +F  V L +   +F    +T   V SAL A +   + +  V  + DL  G G   L    
Sbjct: 196 EFNGVPLWIRPQSFF---QTNPQVASALYATARDWVRQLPVNSMWDLFCGVGGFGLHCA- 251

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDTLQSDWFSSVEGLFDVIV-SNPPY- 174
            SP     G++IS +A++ A+ +A   G++   F  L S  F++       +V  NPP  
Sbjct: 252 -SPTLALTGIEISPEAIQCAQRSAQMLGLNNVSFAALDSTAFATERDRVPQLVLVNPPRR 310

Query: 175 -IESVIVDCLGLEVRDF 190
            I   + D L     D+
Sbjct: 311 GIGEALCDYLSAMAPDY 327


>gi|328544944|ref|YP_004305053.1| methyltransferase type 11 [polymorphum gilvum SL003B-26A1]
 gi|326414686|gb|ADZ71749.1| Methyltransferase type 11 [Polymorphum gilvum SL003B-26A1]
          Length = 224

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 33/168 (19%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              + R++  D   +L+LG GTG   +A  +  P     G+DIS + L+ A +N    G+
Sbjct: 34  DRLIARLDPGDGDTVLELGCGTGRNLIAAARRYPRTLFYGIDISSEMLDTAAANVARAGL 93

Query: 147 SERFDTLQSDWFSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           ++R      D            G FD +  +  Y  S+I             R +L  G 
Sbjct: 94  ADRIALGLGDASRYDAGDLFGRGRFDRVFFS--YSLSMIPTW----------REALAAGS 141

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN 248
           D               L   G  S+ + + ++  + + F +     + 
Sbjct: 142 DS--------------LAPGGRLSL-VDFGRQERLPQAFRAVLFAWLR 174


>gi|322498729|emb|CBZ33802.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 603

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 24/137 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++ +       E      +LDL +GTG + L L K     + +G+++   A+  A+ NA
Sbjct: 387 METMMMKVAEVAELSAGTTLLDLCSGTGTIGLTLSKHVK--RVIGIELVESAVANARRNA 444

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             NG++   +         VE L   ++S  P  +   +      V   DP  +   G++
Sbjct: 445 QQNGIT-NAEFHCGR----VEHLLPSVISGLPAEDRGDI------VVILDPPRA---GVN 490

Query: 202 --------GLSHYRTIA 210
                   G+   R + 
Sbjct: 491 STVLRWIRGMETIRRVV 507


>gi|301762258|ref|XP_002916548.1| PREDICTED: methyltransferase-like protein 5-like [Ailuropoda
           melanoleuca]
          Length = 209

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALE+   N   
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEVFNRNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D  S    +   FD ++ NPP+
Sbjct: 97  FELT-NVDMVQCDVCSLSNRMSKSFDTVIMNPPF 129


>gi|294650736|ref|ZP_06728087.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823382|gb|EFF82234.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 362

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 49/153 (32%), Gaps = 41/153 (26%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK----ALEIAK 138
           + AL     R +  D   IL+LG G G++ L + +  P  K   V  S       L  A 
Sbjct: 116 EFALQLYCERAQLHDGQDILELGCGWGSLTLWMAERYPNAKITAVSNSATQREHILSQAS 175

Query: 139 ----SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
               +N            L SD        FD +VS            +   VR+++   
Sbjct: 176 TRKLNNIEVLTCDVNVLELDSD-------RFDRVVSV----------EMFEHVRNYE--- 215

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                         + + + R L  DGL    I
Sbjct: 216 -------------KLFEKIHRWLKADGLLWCHI 235


>gi|291546996|emb|CBL20104.1| SAM-dependent methyltransferase [Ruminococcus sp. SR1/5]
          Length = 400

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  T TG+  L           +GVD S  A+  A+ NA  NG+      L  D
Sbjct: 222 KGAKVLDCFTHTGSFALNAGIAGAQS-VLGVDASETAVLQARRNASLNGLDGTVKFLCED 280

Query: 157 WFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  +         FDV+V +PP                   + ++ G       YR I 
Sbjct: 281 VFELLPELEEKGEKFDVVVLDPPAFTKSRSSV----------KNAIKG-------YREIN 323

Query: 211 DGVSRHLNKDGLCS 224
               R +   G  +
Sbjct: 324 LRAMRLVKDGGFLA 337


>gi|281348182|gb|EFB23766.1| hypothetical protein PANDA_004629 [Ailuropoda melanoleuca]
          Length = 213

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALE+   N   
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEVFNRNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D  S    +   FD ++ NPP+
Sbjct: 97  FELT-NVDMVQCDVCSLSNRMSKSFDTVIMNPPF 129


>gi|260893156|ref|YP_003239253.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4]
 gi|260865297|gb|ACX52403.1| RNA methyltransferase, TrmA family [Ammonifex degensii KC4]
          Length = 436

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 9/90 (10%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L         R++D   G G + L L +++   + +G++IS +A+ +A  NA  NG+S  
Sbjct: 283 LEYASLSGRERVIDAYCGVGTITLFLARKA--AQVIGIEISPEAVALASVNAAQNGLSH- 339

Query: 150 FDTLQSDWFSSV------EGLFDVIVSNPP 173
              ++      +      EG+FD++V +PP
Sbjct: 340 VSFVKGAAEEVLPELLAREGMFDLVVLDPP 369


>gi|296136809|ref|YP_003644051.1| ribosomal protein L11 methyltransferase [Thiomonas intermedia K12]
 gi|295796931|gb|ADG31721.1| ribosomal protein L11 methyltransferase [Thiomonas intermedia K12]
          Length = 298

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 37/149 (24%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +    + +LD G G+G + +A  K       VGVDI   A+   ++NA  N VS      
Sbjct: 162 QTPSQLSVLDYGCGSGILAIAAAKFGAGP-VVGVDIDPDAVLATEANAAANDVSV----- 215

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           Q+     V +  FD++V+N           L   ++   P I+                 
Sbjct: 216 QTGLPDKVADAQFDIVVAN----------ILSAPLKLLAPAIA----------------- 248

Query: 213 VSRHLNKDGLCSV-EIGYNQKVDVVRIFE 240
              H+   G   +  I   Q  +++  + 
Sbjct: 249 --AHVKPGGWLVLSGILDRQAEELIDAYA 275


>gi|240146223|ref|ZP_04744824.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Roseburia intestinalis
           L1-82]
 gi|257201634|gb|EEU99918.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Roseburia intestinalis
           L1-82]
          Length = 561

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 10/123 (8%)

Query: 57  WRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           + +  +++  ++  +F        E+L  +A  F    ++      + DL +GTG +   
Sbjct: 282 YEELLDLKFKITPFSFFQTNSLGAEVLYQTAREFIGDALDDEASQTVFDLYSGTGTIAQI 341

Query: 115 LLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVS 170
           L   SP  K  +GV+I  +A+  A+ NA  NG++   + +  D       +E   D IV 
Sbjct: 342 L---SPVAKKVIGVEIVEEAVVAARENAALNGLT-NCEFIAGDVLKVIDKIEEKPDYIVL 397

Query: 171 NPP 173
           +PP
Sbjct: 398 DPP 400


>gi|150400710|ref|YP_001324476.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3]
 gi|150013413|gb|ABR55864.1| protein of unknown function Met10 [Methanococcus aeolicus Nankai-3]
          Length = 355

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 16/124 (12%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRI--EKRDVVRILDLGTGTGAVCLALLKE 118
           Y + + +    F PR          L +   RI  + +    ++D+  G G   +A    
Sbjct: 188 YRLWVDVEKVYFSPR----------LGWERKRIMEKVKPEDIVVDMFCGVGPFSIACKNA 237

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               K   +DI+  A+E+ K N   N +  +   + +D     E   + I+ N P    +
Sbjct: 238 K---KIYAIDINPDAVELLKKNIKLNKLQHKIIPINNDI-RKTEVKGNRIIMNLPKFAHL 293

Query: 179 IVDC 182
            VD 
Sbjct: 294 FVDT 297


>gi|189424156|ref|YP_001951333.1| hypothetical protein Glov_1090 [Geobacter lovleyi SZ]
 gi|189420415|gb|ACD94813.1| protein of unknown function Met10 [Geobacter lovleyi SZ]
          Length = 391

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 24/130 (18%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +LD    +G+   A          +G+DIS +A+ +A  NA  NG+S+R    + D F  
Sbjct: 220 VLDCFCYSGSWA-AHAGFFGARSVLGLDISERAVALAGRNAALNGLSDRVSFEECDAFDR 278

Query: 160 ----SVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
                +EG  F V+V +PP             V++   R +L     G   Y TI     
Sbjct: 279 LRSLKLEGRSFGVVVMDPPAF-----------VKN---RKNLAEATKG---YITINRRAL 321

Query: 215 RHLNKDGLCS 224
             L   G   
Sbjct: 322 ELLEPGGYLI 331


>gi|6572603|gb|AAF17316.1|AF139334_1 microcystin synthetase [Microcystis aeruginosa]
 gi|6572607|gb|AAF17318.1|AF139336_1 microcystin synthetase [Microcystis aeruginosa]
          Length = 440

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|54400396|ref|NP_001005949.1| methyltransferase-like protein 5 [Danio rerio]
 gi|53734163|gb|AAH83455.1| Methyltransferase like 5 [Danio rerio]
          Length = 207

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +      + DLG G G + +            G DI   AL+I + N   
Sbjct: 35  CMLYTIHNTFDDIQNKLVADLGCGCGVLSIGAAVLDAGLCV-GFDIDEDALDIFRGNVEE 93

Query: 144 NGVSERFDTLQSDWF---SSVEGLFDVIVSNPPY 174
             +    D +Q D     SS    FD ++ NPP+
Sbjct: 94  FELP-NIDVVQCDVCSIGSSYAKKFDTVIMNPPF 126


>gi|83816758|ref|YP_444958.1| ribosomal protein L11 methyltransferase [Salinibacter ruber DSM
           13855]
 gi|123529288|sp|Q2S4C3|PRMA_SALRD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|83758152|gb|ABC46265.1| ribosomal protein L11 methyltransferase [Salinibacter ruber DSM
           13855]
          Length = 280

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 3/96 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+GTGTG + +A  +        GVD +  A+  A+ N   N  ++     +  
Sbjct: 140 PGDRVLDVGTGTGVLAIAACRIGADA-ARGVDTNPDAVRNARENVRRNEETDCVTVQEGS 198

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              + +  +D++ +N      V+++ +   V    P
Sbjct: 199 VDVASDTQYDLVAAN--ITRRVLLELMPALVARLAP 232


>gi|160942249|ref|ZP_02089558.1| hypothetical protein CLOBOL_07135 [Clostridium bolteae ATCC
           BAA-613]
 gi|158434806|gb|EDP12573.1| hypothetical protein CLOBOL_07135 [Clostridium bolteae ATCC
           BAA-613]
          Length = 477

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 17/131 (12%)

Query: 53  RIL-GWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGT 106
            IL G   FY     +R  +S  +F    +T  L    L  +          R++ DL +
Sbjct: 281 HILYGQDYFYEELLGLRFRISPFSFF---QTNSLGAEVLYDTARGFVGDTKDRVVFDLYS 337

Query: 107 GTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVE 162
           GTG +   L    P  K  VGV+I  +A+  A+ NA  NG+ E  + L  D       ++
Sbjct: 338 GTGTIAQILA---PVAKKVVGVEIVEEAVRSAQVNARLNGL-ENCEFLAGDVLKVIDELQ 393

Query: 163 GLFDVIVSNPP 173
              D+IV +PP
Sbjct: 394 DKPDLIVVDPP 404


>gi|121595929|ref|YP_987825.1| ribosomal protein L11 methyltransferase [Acidovorax sp. JS42]
 gi|120608009|gb|ABM43749.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Acidovorax
           sp. JS42]
          Length = 297

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +   K     +   VDI   A+E  + NA  NGV        +    
Sbjct: 170 RVLDYGCGSGILAIGAAK-FGATEIDAVDIDAAAVESTRQNAQANGVQVN-----AGLPE 223

Query: 160 SVEGLFDVIVSN 171
             +G +  +++N
Sbjct: 224 RAQGQYQTVLAN 235


>gi|299144281|ref|ZP_07037361.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518766|gb|EFI42505.1| methyltransferase domain protein [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 264

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 43/182 (23%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI-------SCKALEI 136
             +      +   D  + LD+G G+GA+ +A  K +   K VG+D          +AL  
Sbjct: 83  QIIEGIAEYVTIPDGGKGLDVGCGSGALTIACAKRNLNSKMVGLDRWGKEYKNYSRALC- 141

Query: 137 AKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
            + NA   G+    + ++ D       +  FDV+ SN  Y+   I      E        
Sbjct: 142 -RKNAEAEGI-NNVEFVKGDALKLDFPDETFDVVTSN--YVYHNIKGYSHQE-------- 189

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLFLVN 248
                         +     R L K G  ++         Y      +   +      V 
Sbjct: 190 --------------LLKETLRVLKKGGTFAI-HDIMSKMIYGDMNKFMEELKREGYERVE 234

Query: 249 AF 250
             
Sbjct: 235 LI 236


>gi|261324107|ref|ZP_05963304.1| methyltransferase [Brucella neotomae 5K33]
 gi|261300087|gb|EEY03584.1| methyltransferase [Brucella neotomae 5K33]
          Length = 295

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK + + K     +   +ALE A+ N
Sbjct: 136 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADWIKNIDLYEADYEALEAARGN 195

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 196 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 241

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 242 -------QSFIAAAASRLKPGGRLLM 260


>gi|163738338|ref|ZP_02145753.1| ribosomal L11 methyltransferase [Phaeobacter gallaeciensis BS107]
 gi|161388259|gb|EDQ12613.1| ribosomal L11 methyltransferase [Phaeobacter gallaeciensis BS107]
          Length = 290

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 50/195 (25%)

Query: 74  PRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF                    +     ++ D+G GT  + +A    
Sbjct: 110 PADRIPLLIEAAMAFGTGHHGTTLGCLKALDKLIEDGFVGEKVADIGCGTAVLAMA-AAR 168

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
               + +  DI   A+++A++N   N +  R   L++  F +            P +   
Sbjct: 169 VWDGQILASDIDQVAVDVAEANLKANDMEGRVQCLEAAGFDA------------PALAEA 216

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-----EIGYNQKV 233
               L        P ++L             A  V+ HL  DG   +     E    Q  
Sbjct: 217 APYDLIFANILKGPLVAL-------------APDVAAHLRSDGYAILSGLLNE----QAD 259

Query: 234 DVVRIFESRKLFLVN 248
           +V  ++    + LV 
Sbjct: 260 EVQGVYAQNGINLVQ 274


>gi|161620078|ref|YP_001593965.1| methyltransferase small [Brucella canis ATCC 23365]
 gi|260567363|ref|ZP_05837833.1| methyltransferase [Brucella suis bv. 4 str. 40]
 gi|161336889|gb|ABX63194.1| methyltransferase small [Brucella canis ATCC 23365]
 gi|260156881|gb|EEW91961.1| methyltransferase [Brucella suis bv. 4 str. 40]
          Length = 340

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   +
Sbjct: 287 -------QSFIAAAASRLKPGGRLLM 305


>gi|78212870|ref|YP_381649.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Synechococcus sp.
           CC9605]
 gi|78197329|gb|ABB35094.1| RNA methyltransferase, TrmA family [Synechococcus sp. CC9605]
          Length = 465

 Score = 57.8 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 70/204 (34%), Gaps = 46/204 (22%)

Query: 57  WRDFYNVRLTLSSDTFE----PRPE--TELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
              F  ++L LSS TF     P+ E   +LL D  L      +       ++D   G G 
Sbjct: 277 EEQFCGIKLALSSTTFVQVNTPQAERIVQLLTDWLLNQCAGAL-------VVDAYCGVGT 329

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L L K     +  G++++  ++E A+ NA+ NG+S R      D    +    D    
Sbjct: 330 IALPLAKAGFDVQ--GLELNPDSVEQARLNAMHNGLSSRCAFHAGDVADLLAAHLDDC-- 385

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG---VSRHLNKDGLCSVEI 227
                           V D  PR  LD          +I +    V  +L+ D       
Sbjct: 386 -------------QALVLD-PPRRGLD-----RRVVDSILEQPPVVVVYLSCD------- 419

Query: 228 GYNQKVDVVRIFESRKLFLVNAFK 251
              Q  D+  +      + +   +
Sbjct: 420 PATQARDLKALLAPSGSYELEVLQ 443


>gi|312382192|gb|EFR27733.1| hypothetical protein AND_05214 [Anopheles darlingi]
          Length = 1097

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 13/158 (8%)

Query: 101  ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--F 158
            I+D   G G   +         K + +DI  + +E+AK NA   GV++R + +  D+   
Sbjct: 938  IVDAFCGCGGNTIQFA--FTCQKVIAIDIDPRKIEMAKHNAAVYGVADRIEFITGDFVQL 995

Query: 159  SSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
            ++  G     D +  +PP+        +  EV D +  +      D +   + +++ V  
Sbjct: 996  AAAGGGRLKADTVFLSPPW---GGPSYMKDEVYDLEQSLLPVPASDLMRAAQQVSNNVVL 1052

Query: 216  HLNKD---GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
            +L ++      ++  G N  V++ + F  RKL  + A+
Sbjct: 1053 YLPRNSNTQQLTMLAGPNGAVEIEQNFLDRKLIALTAY 1090


>gi|145588396|ref|YP_001154993.1| ribosomal protein L11 methyltransferase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046802|gb|ABP33429.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
          Length = 506

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 2/84 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +        +LD G G+G + +A  K       +G DI  +A+  A+SNA  N    
Sbjct: 164 WLEQNSHLQNQSLLDYGCGSGILAIAAAKLGCNP-VIGTDIDPQAMVAARSNAEINNTVI 222

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSN 171
           RF     +    + E  +D++++N
Sbjct: 223 RFVLPNENAPELAAETKYDIVMAN 246


>gi|24374890|ref|NP_718933.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           oneidensis MR-1]
 gi|24349591|gb|AAN56377.1|AE015774_12 cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           oneidensis MR-1]
          Length = 418

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R++ +    +L++GTG GA+ +   K           IS      AK+     G
Sbjct: 179 LKTICERLDLKPGQTLLEIGTGWGALAIYAAKNY-GVHVTTTTISDAQYAYAKARVEREG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+    L  D + ++ G +D +VS
Sbjct: 238 LSDSVTLLTED-YRNLSGQYDRLVS 261


>gi|332879529|ref|ZP_08447224.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332682495|gb|EGJ55397.1| methyltransferase domain protein [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 215

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 55/181 (30%), Gaps = 44/181 (24%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-SNAVTNG 145
           A++   ++     ++LD+G G GA    +LK  P  +  GVDIS +++  A+  N     
Sbjct: 37  AWAFTHLDWCPDWKVLDIGCGGGANIAHMLKRCPQGQVYGVDISPESVAFARQKN--KAF 94

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ER   LQ               S+ P+           E   F          D    
Sbjct: 95  LDERCFILQG------------TASDLPFKGDTFDVATAFETLYFW--------EDPDKA 134

Query: 206 YRTIADGVSRHLNKDG--LCSVEIGYNQ---------------KVDVVRIFESRKLFLVN 248
           +  I     R L   G  L + E                      ++    E+     V 
Sbjct: 135 FCEIL----RILKPGGIFLIACEASNPHNTTWTDRIEGMSVYTAEEIKHKLENCGFVHVR 190

Query: 249 A 249
            
Sbjct: 191 T 191


>gi|311067148|ref|YP_003972071.1| putative RNA methyltransferase [Bacillus atrophaeus 1942]
 gi|310867665|gb|ADP31140.1| putative RNA methyltransferase [Bacillus atrophaeus 1942]
          Length = 460

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELKGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GITADTLVVDPP 390


>gi|296330132|ref|ZP_06872614.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673376|ref|YP_003865048.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296152721|gb|EFG93588.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411620|gb|ADM36739.1| putative RNA methyltransferase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 459

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELKGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GITADTLVVDPP 390


>gi|268607907|ref|ZP_06141638.1| ribosomal protein L11 methyltransferase [Ruminococcus flavefaciens
           FD-1]
          Length = 321

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 38/155 (24%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-------T 152
           ++LDLG G+G + +A +        V VDI   A E A+ NA  N +            T
Sbjct: 181 KVLDLGCGSGILSIAAMLLGAD-HAVAVDIEQNAAETAQENAGKNHIDPALYKTYYGDIT 239

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           +       +   +D+I +N           +  +V        L    D   H+R     
Sbjct: 240 VNEKLAEEIHDKYDMITAN-----------IVADV--------LIAMKD---HFRR---- 273

Query: 213 VSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL 246
              +L   G+  V  I   +  +V+    S     
Sbjct: 274 ---YLRDGGILIVSGIIEERAEEVINAILSAGFKD 305


>gi|238917477|ref|YP_002930994.1| hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750]
 gi|238872837|gb|ACR72547.1| Hypothetical protein EUBELI_01555 [Eubacterium eligens ATCC 27750]
          Length = 470

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLV------DSALAFSLPRIEKRDVVRILDLGT 106
            I    +   +R  ++  +F         V      +  L+     +     V I DL T
Sbjct: 279 YI--EEELLGLRFKITPFSFFQTNSLGAEVLYSKAREYVLSGGFGDVADSKPV-IYDLYT 335

Query: 107 GTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVE 162
           GTG +   L   SP   K +GV+I  +A+E AK NA  NG++   + +  D      ++E
Sbjct: 336 GTGTIAQML---SPVASKVIGVEIVAEAVEAAKKNAAQNGLT-NCEFIADDVLKALDNIE 391

Query: 163 GLFDVIVSNPP 173
              D IV +PP
Sbjct: 392 IKPDFIVLDPP 402


>gi|17545416|ref|NP_518818.1| protein-L-isoaspartate O-methyltransferase [Ralstonia solanacearum
           GMI1000]
 gi|17427708|emb|CAD14227.1| probable protein-l-isoaspartate o-methyltransferase [Ralstonia
           solanacearum GMI1000]
          Length = 216

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 17/147 (11%)

Query: 41  AIVRSLKHESIHR-ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           AIV+  ++       L + D   + L    +   PR E  +L + A+         R   
Sbjct: 30  AIVKREQYVPEAYRTLAFVD-MEIPLPGGQNMLPPRVEARVLQELAV---------RKHE 79

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +L++G G+G +   L           VDI+ + +  A+ N   NGV+   D +Q D   
Sbjct: 80  DVLEVGAGSGYMAALLAHR--GRHVTTVDIAPELVAFARDNLARNGVT-NVDVVQGDAGQ 136

Query: 160 SVEGLFDVIVS---NPPYIESVIVDCL 183
                   ++    + P +   ++  L
Sbjct: 137 GWGNSLYDVICVSGSVPAVPESLLAQL 163


>gi|325116539|emb|CBZ52093.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 335

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 6/83 (7%)

Query: 163 GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
           G+FDVI+ NPPY+             D+    +  GG DG             +L+  G+
Sbjct: 242 GIFDVILFNPPYVPGS-PRGRPPSPADW----AWWGGEDGREVIDRFLPQAIAYLSPSGV 296

Query: 223 CSVEIG-YNQKVDVVRIFESRKL 244
             + +   N+  +VV   E++  
Sbjct: 297 LYLLLEKRNKVDEVVAHIEAQGF 319


>gi|309783077|ref|ZP_07677796.1| ribosomal protein L11 methyltransferase [Ralstonia sp. 5_7_47FAA]
 gi|308918185|gb|EFP63863.1| ribosomal protein L11 methyltransferase [Ralstonia sp. 5_7_47FAA]
          Length = 298

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERTLDYGCGSGILAI-VAKKLGAGETVGVDIDPNAVEASRYNAERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VQATFALPD----DAPEGTFDLVVAN 234


>gi|282849051|ref|ZP_06258440.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella parvula
           ATCC 17745]
 gi|282581326|gb|EFB86720.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella parvula
           ATCC 17745]
          Length = 505

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D AL ++  + E+     ++D   GTG + L L  ++
Sbjct: 321 DLRFTLSPHSFFQVNPEQTTVLYDQALKYANLKGEE----TVIDAYCGTGTISLFLAHKA 376

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 377 K--HVIGIEIVEPAINNARENARRNGY-DNTEFIVADAAVEMPKLYKAGVRPDVIVFDP- 432

Query: 174 YIESVIVDCLGLEVRDFDPR 193
            I +   + +       +P+
Sbjct: 433 -IRAGCKEEVLTSAAGMEPK 451


>gi|254787289|ref|YP_003074718.1| RNA methyltransferase [Teredinibacter turnerae T7901]
 gi|237685081|gb|ACR12345.1| putative RNA methyltransferase [Teredinibacter turnerae T7901]
          Length = 399

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 46/182 (25%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-------------------DV 98
           R+F N+   + +   EP P    L+++ + F  P  + +                   + 
Sbjct: 165 REFENLPEQVVAALGEP-PAEVELIENGVRFIAPLHDGQKTGWFYDQRPNRAWLKGLVEG 223

Query: 99  VRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            R+LD+ +  GA  + AL   +        D S +AL+IA+ NA   G  +RF  L+ D 
Sbjct: 224 KRVLDVFSYVGAFGVQALAWGAKD--VWCADASARALDIAQKNAQLQGGGDRFTALEGDA 281

Query: 158 FSSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F+S+      +  FDV++ +PP       D              L  G      YR I +
Sbjct: 282 FASLKALKENDERFDVVIVDPPAFIKRKKD--------------LAAGT---QAYRRINE 324

Query: 212 GV 213
             
Sbjct: 325 LA 326


>gi|15790204|ref|NP_280028.1| hypothetical protein VNG1117C [Halobacterium sp. NRC-1]
 gi|169235933|ref|YP_001689133.1| hypothetical protein OE2614F [Halobacterium salinarum R1]
 gi|10580660|gb|AAG19508.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167726999|emb|CAP13785.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 327

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 32/193 (16%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--P 76
             + +++  S +   QR    + I      E++HR  G        L +++  F PR   
Sbjct: 109 PVEAVLNRASKIKGEQRVREWDVIAGDST-ETVHREYGHA----FALDVAAVYFSPRLAT 163

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
           E   +V+   A             + D+  G G   + +       + V  D++  A++ 
Sbjct: 164 ERHRVVEQVTA----------GEHVFDMFAGVGPYAVPMASA--GARVVATDVNETAIDY 211

Query: 137 AKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
            ++NA  NGV++R   +  D         G  D IV N P+     +          +  
Sbjct: 212 LQANAARNGVADRVTGVAGDVREVAGEYTGWADRIVMNLPHTADEFL----------ETA 261

Query: 194 ISLDGGIDGLSHY 206
           ++L G    L  Y
Sbjct: 262 VALAGDECTLHFY 274


>gi|332686845|ref|YP_004456619.1| ribosomal protein L11 methyltransferase [Melissococcus plutonius
           ATCC 35311]
 gi|332370854|dbj|BAK21810.1| ribosomal protein L11 methyltransferase [Melissococcus plutonius
           ATCC 35311]
          Length = 315

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 52/157 (33%), Gaps = 31/157 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A  K     K    D+   A+  AK N   N + +  +   +
Sbjct: 174 RGGETLIDVGTGSGVLSIA-GKYLGAKKIYAYDLDEVAVTAAKENIQLNHLEKDIEITTN 232

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +  + +    ++IV+N                      ++             +      
Sbjct: 233 NLLTDISIQAEMIVAN---------------------ILA--------DIIVLMLKDAWN 263

Query: 216 HLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
            L  +G   +  I  ++K  ++      +  +    +
Sbjct: 264 LLKTNGTLIISGIIEDKKEMILAEIRETEFVIDQILQ 300


>gi|301609194|ref|XP_002934152.1| PREDICTED: trimethylguanosine synthase-like [Xenopus (Silurana)
           tropicalis]
          Length = 845

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 74/177 (41%), Gaps = 20/177 (11%)

Query: 83  DSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +        R+ +  D   ++D   G G   +   K     + + VDI    L+ A++NA
Sbjct: 672 EKIAEHIASRVRQSCDCGVVVDAFCGVGGNAIQFAKAGN--RVIAVDIDPVKLDFARNNA 729

Query: 142 VTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              GV++R + ++ D+   + +   D +  +PP+     V     ++R     + L    
Sbjct: 730 EVYGVTDRIEFIRGDFMLLAQDLKADAVFLSPPWGGPDYVSAETFDIRT----MCL---- 781

Query: 201 DGLSHYRT-------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           DG   +R        I   + R+ + + + S+  G   +V++ + F ++KL  +  +
Sbjct: 782 DGFEVFRLSKQLTKNIIYFLPRNTDVEQVASL-AGPGGQVEIEQNFLNKKLKTMTVY 837


>gi|300869710|ref|YP_003784581.1| modification methylase BsuBI [Brachyspira pilosicoli 95/1000]
 gi|300687409|gb|ADK30080.1| modification methylase, BsuBI [Brachyspira pilosicoli 95/1000]
          Length = 406

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 17/155 (10%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            F P+   +LL    L   +   EK+D V+ILD   G+G   L+  +        G DI 
Sbjct: 28  YFTPKSIRDLL----LKELINISEKKDNVKILDPACGSGEFLLSCREYFKNAHMHGFDID 83

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              + I+K   + N   +  DTL+ D   S+   +D I+ NPPY E  +        +D 
Sbjct: 84  ESLVSISKK-LINNADIKCLDTLKFDTDKSI--KYDYIIGNPPYFEFKLDKEQKSRFKDI 140

Query: 191 DPRISLDGGIDGL-SHYRTIADGVSRHLNKDGLCS 224
                    I+G  + +          LN DG  +
Sbjct: 141 ---------INGRVNIFSLFIKIGLELLNDDGYLA 166


>gi|297565090|ref|YP_003684062.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           silvanus DSM 9946]
 gi|296849539|gb|ADH62554.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           silvanus DSM 9946]
          Length = 237

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 26/131 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++   RILDL TGTG + L L + +P  + +G D +   LEIA+  A   G+   F    
Sbjct: 52  EKKPRRILDLATGTGDMALLLKRLAPQAEVIGADFALPMLEIARQKARKLGLEIPFQQAD 111

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           +      +  FD +              +    R+F             + Y      + 
Sbjct: 112 ALALPFPDARFDAV-------------TIAFGFRNF-------------ADYDQALAELY 145

Query: 215 RHLNKDGLCSV 225
           R L   G   +
Sbjct: 146 RVLAPGGRLCI 156


>gi|281353795|gb|EFB29379.1| hypothetical protein PANDA_009403 [Ailuropoda melanoleuca]
          Length = 631

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 25/130 (19%)

Query: 47  KHESIHRILGWR----DFYNVRLTLSSDTFEPRPETELLVDSALAFSLP-RIEKRDVVRI 101
           +   +  + G R    D   +   +S   F    +   L    L   +    +      +
Sbjct: 373 EGLPLEHVAGDRCIHEDLLGLTFRISPHAFF---QVNTLAAEVLYTVIQDWAQLDTGSTV 429

Query: 102 LDLGTGTGAVCLALL----------------KESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LD+  GTG + LAL                       + VG+++  +A+E A+ NA  N 
Sbjct: 430 LDVCCGTGTIGLALAPVSLWDGVGRHESVLSWLQRVKRVVGIELCQEAVEDARVNARDNE 489

Query: 146 VSERFDTLQS 155
           ++   +    
Sbjct: 490 LT-NVEFHCG 498


>gi|256852236|ref|ZP_05557622.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 27-2-CHN]
 gi|260661732|ref|ZP_05862643.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 115-3-CHN]
 gi|297205598|ref|ZP_06922994.1| site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus jensenii JV-V16]
 gi|256615282|gb|EEU20473.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 27-2-CHN]
 gi|260547479|gb|EEX23458.1| type I restriction-modification system, M subunit [Lactobacillus
           jensenii 115-3-CHN]
 gi|297150176|gb|EFH30473.1| site-specific DNA-methyltransferase (adenine-specific)
           [Lactobacillus jensenii JV-V16]
          Length = 510

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 34/201 (16%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
             A  R +        L  + F +       + + PR   + LV+           +   
Sbjct: 146 KEAKERDILGRVYEYFL--QKFASNEKKNGGEFYTPRSVVKTLVEMV---------EPFK 194

Query: 99  VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + D   G+G + +   +       +       G + +    ++AK N    G+   F 
Sbjct: 195 GTVYDPCCGSGGMFVQSEQFVQEHQGQIADLSVYGQESNPTTWKLAKLNLAIRGIDNNFG 254

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG----GIDGLS 204
             Q+D F++       FD I++NPP+     V   G E    DPR    G    G    +
Sbjct: 255 AHQADTFTNDLHKGTHFDYILANPPF----NVKKWGGEKLKDDPRWK-YGIPPEGNANYA 309

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               I       LN DG    
Sbjct: 310 WIEHIISK----LNPDGKAGF 326


>gi|151301132|ref|NP_001093089.1| methyltransferase [Bombyx mori]
 gi|87248173|gb|ABD36139.1| S-adenosylmethionine-dependent methyltransferase [Bombyx mori]
 gi|95102706|gb|ABF51291.1| methyltransferase [Bombyx mori]
          Length = 214

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 6/94 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL     +    +   ILD G G G + +  +     F    V+I   ALE+ + N    
Sbjct: 40  ALYTIQTQFGDLEDKLILDAGCGPGNLSIGAVLLGAGF-VTSVEIDADALEVFQENIQEM 98

Query: 145 GVSERFDTLQSDWFSS----VEGLFDVIVSNPPY 174
            + E  D +Q D+ S      E +FD ++ NPP+
Sbjct: 99  EI-ENIDIVQCDFLSESYFRWENMFDTVIMNPPF 131


>gi|326471349|gb|EGD95358.1| hypothetical protein TESG_02844 [Trichophyton tonsurans CBS 112818]
          Length = 283

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         ++++GTG+G +   L        G      +G D++ KA    +     
Sbjct: 54  LPTSTTSPSPVVVEVGTGSGVILGFLAANCKAILGRSDILTIGTDVNRKACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                                N+      +    +  D  S +  G+ D+++ NPPY+ +
Sbjct: 114 AISDKYSEENFRAAPANKESTNSKVPKPVQPLAVIIGDLCSPLRPGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGL--------------EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +  L                E+  +   ++  GG  G+     + D +   LN + G+
Sbjct: 174 PELPRLPSSSEVTSSASGMSKFEMESYFLSLTYAGGEHGMEITDRLLDSIPHVLNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|197106521|ref|YP_002131898.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
           zucineum HLK1]
 gi|196479941|gb|ACG79469.1| cyclopropane-fatty-acyl-phospholipid synthase [Phenylobacterium
           zucineum HLK1]
          Length = 340

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 26/164 (15%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             RL  S   + P        + ALA +       D   IL+LG G G++ L +    P 
Sbjct: 80  GPRLKYSCALYLPGATLTQAEERALAETAEHAALEDGQEILELGCGWGSLTLWMASAYPN 139

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
            +   V  S    E  ++ A   G++              +  FD +VS           
Sbjct: 140 ARITAVSNSASQGEFIRARARAQGLTNLVVVTADMNHFEPDRRFDRVVS----------- 188

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                V  F+  ++         ++R +   +   L   G   +
Sbjct: 189 -----VEMFE-HMA---------NWRALLGRIRGWLKPSGRLFL 217


>gi|154151210|ref|YP_001404828.1| protein of unknown function Met10 [Candidatus Methanoregula boonei
           6A8]
 gi|153999762|gb|ABS56185.1| protein of unknown function Met10 [Methanoregula boonei 6A8]
          Length = 292

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  +  +    E     R+ D+  G G   + +       K   ++I+  A    + N  
Sbjct: 138 DEKMRMARLVRESPAGARVADMFAGIGYFAIPMA--GSGAKVHAMEINPVACAYLERNIA 195

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            NG++ R      D    + G +D +V 
Sbjct: 196 ANGLAGRVQVSCGDCRVHLSGTYDRVVM 223


>gi|68249563|ref|YP_248675.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           86-028NP]
 gi|81336008|sp|Q4QLT2|PRMA_HAEI8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|68057762|gb|AAX88015.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           86-028NP]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A LK       VG+DI  +A+  ++ NA  NGV +R     SD
Sbjct: 158 KNKTVIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRDNAEQNGVVDRLQLFLSD 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 E-KPSDLKADVVVAN 230


>gi|240103955|ref|YP_002960264.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
 gi|239911509|gb|ACS34400.1| 23S rRNA (uracil-5-)-methyltransferase (rumA) [Thermococcus
           gammatolerans EJ3]
          Length = 421

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 14/161 (8%)

Query: 22  VIVDPDSVLDD-RQRFFLTNAIVRSLKHES--IHRILGWRD-FYNVRL---TLSSDTF-- 72
           ++  P  + +D  Q F    +I  S+      +    G  + F+        L    +  
Sbjct: 196 LVTGPGELPEDFPQYFDYAESIYWSVNRTPSDVSY--GEIERFWGKEFIKEELDGTVYLI 253

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P    +     A+       ++ +  R+LDL +G G   + L      F   G++I+  
Sbjct: 254 HPNSFFQTNSYGAVELLREVAKRAEGGRVLDLYSGVGTFGVYLA--RKGFSVEGIEINPF 311

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A+E+A  NA  NGV  RF         S++  +D ++ +PP
Sbjct: 312 AVEMANRNAEINGVEARFRVGADKDVGSLQA-YDTVIVDPP 351


>gi|195546796|ref|NP_001124239.1| protein arginine methyltransferase 10 (putative) [Danio rerio]
 gi|190337701|gb|AAI63812.1| Zgc:195220 [Danio rerio]
          Length = 859

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 23/159 (14%)

Query: 65  LTLSSDTFEPRPETELLVDSALAF----SLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               ++    R    +L D         ++ +  +     +LD+GTGTG +     K + 
Sbjct: 144 FYRVANWLVERWHFLMLNDHGRNHKYQLAIKKAVEGGCSSVLDIGTGTGILG-MCAKMAG 202

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    ++S    E+A      NG+++    L               +  P  I + + 
Sbjct: 203 AAEVYACELSKTMYELACEVLSANGMADCIKILHRKSLD---------MEIPKDIPNRVS 253

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             +   V         D G+ G     T+       L  
Sbjct: 254 LVVTETV---------DAGLFGEGIIETLIHAWKHLLLP 283


>gi|15643454|ref|NP_228500.1| hypothetical protein TM0691 [Thermotoga maritima MSB8]
 gi|170288042|ref|YP_001738280.1| methyltransferase type 11 [Thermotoga sp. RQ2]
 gi|281411919|ref|YP_003345998.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
 gi|4981214|gb|AAD35773.1|AE001741_6 conserved hypothetical protein [Thermotoga maritima MSB8]
 gi|170175545|gb|ACB08597.1| Methyltransferase type 11 [Thermotoga sp. RQ2]
 gi|281373022|gb|ADA66584.1| Methyltransferase type 11 [Thermotoga naphthophila RKU-10]
          Length = 216

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/134 (26%), Positives = 48/134 (35%), Gaps = 15/134 (11%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++V  +L+LG+G G V  AL K     K VGV+   +  E A      N + ER   +
Sbjct: 35  PSKNVRSVLELGSGVGTVSFALAKLY-NVKVVGVEKEKELYEKALEGISLNKLEERVSFV 93

Query: 154 QSDW--FSSVEGLFDVIVSNPPYIESVIVDC-LGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            S     S     FD++VSNPP+   V     L    R  + R                 
Sbjct: 94  NSSVEELSFPPESFDMVVSNPPHHTKVKSPNRLRASTRSIERR-----------DIEGFV 142

Query: 211 DGVSRHLNKDGLCS 224
               R L   G   
Sbjct: 143 QATFRFLKNGGTAV 156


>gi|57642070|ref|YP_184548.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis
           KOD1]
 gi|57160394|dbj|BAD86324.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus kodakarensis
           KOD1]
          Length = 417

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A+       E  +  ++LDL +G G   + L K    FK  G++I+  A+E+AK NA  
Sbjct: 264 QAVNLVRKVAELVEGEKVLDLYSGVGTFGIYLAKR--GFKVEGIEINPFAVEMAKKNAQI 321

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           NGV   F   +    +S+   +D +V +PP
Sbjct: 322 NGVDAEFRVGEDKDVNSLSE-YDTVVVDPP 350


>gi|187930101|ref|YP_001900588.1| ribosomal protein L11 methyltransferase [Ralstonia pickettii 12J]
 gi|226710102|sp|B2UCS1|PRMA_RALPJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|187726991|gb|ACD28156.1| ribosomal protein L11 methyltransferase [Ralstonia pickettii 12J]
          Length = 298

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L             R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVHPGERTLDYGCGSGILAI-VAKKLGAGETVGVDIDPNAVEASRYNAERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VEATFALPD----DAPEGTFDLVVAN 234


>gi|120597328|ref|YP_961902.1| ribosomal protein L11 methyltransferase [Shewanella sp. W3-18-1]
 gi|146294527|ref|YP_001184951.1| ribosomal protein L11 methyltransferase [Shewanella putrefaciens
           CN-32]
 gi|166223440|sp|A4YB19|PRMA_SHEPC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223442|sp|A1RFA3|PRMA_SHESW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|120557421|gb|ABM23348.1| LSU ribosomal protein L11P methyltransferase [Shewanella sp.
           W3-18-1]
 gi|145566217|gb|ABP77152.1| LSU ribosomal protein L11P methyltransferase [Shewanella
           putrefaciens CN-32]
 gi|319427892|gb|ADV55966.1| ribosomal protein L11 methyltransferase [Shewanella putrefaciens
           200]
          Length = 293

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 2/99 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ++D G G+G + +A LK     K  G+DI  +A++ +++NA  N V+++      +   
Sbjct: 161 EVIDFGCGSGILAVAALKLGAK-KVTGIDIDYQAIDASRANAERNNVADKLALYLPE-DQ 218

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             +   DV+V+N        +  L  E      +++L G
Sbjct: 219 PADLKADVLVANILAGPLRELAPLIAERVKSGGKLALSG 257


>gi|319940773|ref|ZP_08015113.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
 gi|319805793|gb|EFW02569.1| PUA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
          Length = 401

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 61  YNVRLTLSSDT--FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y V + +   T  +  + E+ L    A      R      +R L+    TG   LALLK 
Sbjct: 189 YGVDVRVGHKTGFYIDQRESRLSAQRAAEEFRRR--HGRGLRALNCFCYTGGFSLALLKG 246

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNP 172
               + V VD S +AL +A++NA  NG + R + L  D F+ +         FD+++ +P
Sbjct: 247 GAE-EVVSVDSSEEALAMARANAERNGFTNRAEWLCEDVFTCLRRLRDAGEKFDLVILDP 305

Query: 173 PYIESVIVD 181
           P   S    
Sbjct: 306 PKFASSHYH 314


>gi|300814227|ref|ZP_07094503.1| putative 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus
           sp. oral taxon 836 str. F0141]
 gi|300511651|gb|EFK38875.1| putative 23S rRNA (uracil-5-)-methyltransferase RumA [Peptoniphilus
           sp. oral taxon 836 str. F0141]
          Length = 441

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 7/112 (6%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +   I+     ++LDL  GTG +     +++     +GV+I  +A+  A+ NA  N +S 
Sbjct: 288 AFDMIDNLQGKKVLDLYCGTGTISQVFAQKAE--SVLGVEIVEEAVNAARENAQYNNIS- 344

Query: 149 RFDTLQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
             D +  D     + ++   D+I+ +PP +       L   + DF P   L 
Sbjct: 345 NVDFIAGDVAKVVNDLDIKADIIILDPPRVGINNPKALDK-IIDFSPEEFLY 395


>gi|301064106|ref|ZP_07204553.1| methyltransferase domain protein [delta proteobacterium NaphS2]
 gi|300441726|gb|EFK06044.1| methyltransferase domain protein [delta proteobacterium NaphS2]
          Length = 218

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 33/145 (22%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            LA  L  I       +L++G G G V +   +     +    + +  AL  A++NA  N
Sbjct: 58  VLANHLASIPADPDKHLLEIGCGIGLVGVVAAQF--GHRITMTEYNRDALNFAEANASAN 115

Query: 145 GVSER--FDTLQSDW-FSSVEGLFDVIV-SNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              +    +    DW   ++EG FD+I+ S   Y E             F+P + L    
Sbjct: 116 KPPDPGLLEIGALDWTRPAIEGRFDMILGSEVIYKEEY-----------FEPVLGLF--- 161

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                         R+L   G   +
Sbjct: 162 -------------KRYLKPGGEIIL 173


>gi|302850609|ref|XP_002956831.1| hypothetical protein VOLCADRAFT_97817 [Volvox carteri f.
           nagariensis]
 gi|300257891|gb|EFJ42134.1| hypothetical protein VOLCADRAFT_97817 [Volvox carteri f.
           nagariensis]
          Length = 325

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 29/167 (17%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G G   L + K  P  K   VD+  + LE A + A    +  + D +  D   
Sbjct: 150 RVLDAGCGIGDNALYVAKACPGAKVTAVDVVPRCLEFAAAKANLRNMRSQLDLVVGDLLQ 209

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRD---FDPRISLDGGIDGLSHYRTIADGVSRH 216
                    +S+ P +     +     V D   F      D   D           + R 
Sbjct: 210 QN-------LSSMPAVLGPDKNGSFNVVLDSSFF--HSFSDADRD------RYVSTLRRL 254

Query: 217 LNKDGLCSV------EI--GYNQKVDVVRI---FESRKLFLVNAFKD 252
           L   GL  +      E   G  +++ V  +   F     + V   +D
Sbjct: 255 LRPGGLIYMNCMSEEETRPGGPRRISVPDLLTVFNRPNGWEVETIED 301


>gi|289450522|ref|YP_003475311.1| hypothetical protein HMPREF0868_1010 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289185069|gb|ADC91494.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 31/181 (17%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +RL    + F    ++ +L      F+         +++ DL  G+G + L        
Sbjct: 24  GLRLIQPRNKFRFGQDSVVLA----YFAAINTTASKNLKVADLCAGSGVIGLLYAARCRQ 79

Query: 122 FKG--VGVDISCKALEIAKSNAVTN----------GVSERFDTLQSDWFSSV-----EGL 164
                V V+   +   + + NA  N           ++E  ++ Q D    V     +  
Sbjct: 80  VPVLTVAVEHDPEMFSVLERNACLNARYNILPVHANLAEDVESWQVDQKHKVTPGDFKHS 139

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           F V++ NPPY        +  ++   +    + G    L  Y          L   G   
Sbjct: 140 FQVVLVNPPYSHINKNKFIENDMARHE----ITGD---LHAY---LKAAVNLLRPLGQLF 189

Query: 225 V 225
           +
Sbjct: 190 I 190


>gi|224098629|ref|XP_002187418.1| PREDICTED: similar to TRM2 tRNA methyltransferase 2 homolog B
           [Taeniopygia guttata]
          Length = 467

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 12/111 (10%)

Query: 45  SLKHE--SIHRILG----WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              HE      + G    + + + ++  +S D F    +        L  ++  + +   
Sbjct: 251 RCSHEQSPYQLLHGAPHIFEELHGLKFRISPDAFF---QVNTAGAEVLYQAVGELCQATG 307

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             +L D+  GTG + L+L  +    K +GV++  KA+E A+ NA  NG+S 
Sbjct: 308 DTVLLDICCGTGTIGLSLAHQV--SKVIGVEVVEKAIEDAEWNAAFNGISN 356


>gi|84686150|ref|ZP_01014045.1| ribosomal protein L11 methyltransferase, putative [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665677|gb|EAQ12152.1| ribosomal protein L11 methyltransferase, putative [Rhodobacterales
           bacterium HTCC2654]
          Length = 293

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 89  SLPRIEKRDVV--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +L RI  + VV   + D+G GT  + +A  K  P    +  DI   A ++A++N   NGV
Sbjct: 141 ALDRIANQGVVARNVADIGAGTAVLAMAAAKIWPNP-VIASDIDEVACDVARANVHANGV 199

Query: 147 SERFDTLQSDWFSSVEGL----FDVIVSN 171
            +R   +++  F   +      FD++ +N
Sbjct: 200 EDRVHVVEAAGFDHPDLKSASPFDLVFAN 228


>gi|288916162|ref|ZP_06410542.1| Cyclopropane-fatty-acyl-phospholipid synthase [Frankia sp. EUN1f]
 gi|288352353|gb|EFC86550.1| Cyclopropane-fatty-acyl-phospholipid synthase [Frankia sp. EUN1f]
          Length = 478

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   R+LD+G G G++ L   +     +GVG+ IS +   +A+      G+++R +    
Sbjct: 237 RPGERLLDVGCGWGSMLLHAARHH-GVQGVGITISEQQAALARRRVAEAGLADRVEIRLQ 295

Query: 156 DWFSSVEGLFDVIVS 170
           D+    +G FD I S
Sbjct: 296 DYREITDGPFDAISS 310


>gi|227494675|ref|ZP_03924991.1| possible rRNA (guanine-N(2)-)-methyltransferase [Actinomyces
           coleocanis DSM 15436]
 gi|226831857|gb|EEH64240.1| possible rRNA (guanine-N(2)-)-methyltransferase [Actinomyces
           coleocanis DSM 15436]
          Length = 193

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 64/179 (35%), Gaps = 35/179 (19%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   +L++ +    P  E    V  AL   L   ++    ++LDL  G+GA+ +      
Sbjct: 9   FRGRKLSVPASGTRPTSER---VREALFSRLETWDELQDAKVLDLFAGSGALGIE-AVSR 64

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGL--FDVIVSNPPY- 174
              +   VD    A+   K+N    G   +F  L++D   F++  G+  + ++  +PPY 
Sbjct: 65  GAAQATLVDFGAAAVTCCKANVAATGKPAQFQVLRADAVKFANNPGMGNYTLVFLDPPYD 124

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
             +  +                            + +G+  HL  + L  VE       
Sbjct: 125 FPAKQMI--------------------------QVLEGLRSHLVDNALLVVETSTRTAE 157


>gi|160939086|ref|ZP_02086437.1| hypothetical protein CLOBOL_03980 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438049|gb|EDP15809.1| hypothetical protein CLOBOL_03980 [Clostridium bolteae ATCC
           BAA-613]
          Length = 185

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 12/127 (9%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            + RP T+ + ++      P +        LDL +G+GA+ +  L        +  + + 
Sbjct: 19  LDTRPTTDRIKETLFNMLQPELAD---CMFLDLFSGSGAIGIEALSRGAGLAVMIEN-NP 74

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           KALE  + N     + ER   +  D              FD++  +PPY  +   + L L
Sbjct: 75  KALECIRENLSRTKLEERAMVMGCDVITGLKRLEGKNYKFDIVFMDPPY--NHEYERLVL 132

Query: 186 EVRDFDP 192
           +  +  P
Sbjct: 133 DYLNHSP 139


>gi|53804889|ref|YP_113475.1| methyltransferase [Methylococcus capsulatus str. Bath]
 gi|53758650|gb|AAU92941.1| putative methyltransferase [Methylococcus capsulatus str. Bath]
          Length = 258

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 30/159 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++     L  ++ R    +LD+G G G +  A+    P  + VGVD+S   +  A+  A 
Sbjct: 17  EAWARDLLAGLKLRPDDAVLDVGCGDGRITAAIADRVPQGRAVGVDLSSDMIGHAQ--AH 74

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +  +  F  + +      +  F  + SN               ++D  P ++       
Sbjct: 75  HHRPNLAFRRIDAQNL-PFDAEFTAVFSN----------AALHWIKDHRPALA------- 116

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
                    G++R L   G C +E+ G+     V+  FE
Sbjct: 117 ---------GIARALKPGGRCLLEMGGHGNGAGVIAAFE 146


>gi|313892229|ref|ZP_07825822.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Dialister
           microaerophilus UPII 345-E]
 gi|313119367|gb|EFR42566.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Dialister
           microaerophilus UPII 345-E]
          Length = 545

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 38/206 (18%)

Query: 51  IHRILGWR----DFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
           +  I G +        +   +S  +F    + + E L + AL F+           ++D 
Sbjct: 257 MEHIWGEKTLKASIGKLTFEISPYSFFQVNKEQAEKLYEKALDFA----NLFGDETVIDA 312

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
             GTG + L L +++     +G++I   A+E AK NA  N +    +   +D        
Sbjct: 313 YCGTGTISLYLAQKAK--HVIGIEIIKDAIENAKENAKRNKIK-NVEFHAADVA------ 363

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                    Y+  +    +  EV   DP  +   G D       + + + + +N + +  
Sbjct: 364 --------KYLPELAKKGIKAEVMVLDPVRA---GCD-----EKVIEAIGK-INPERIVY 406

Query: 225 VEIG-YNQKVDVVRIFESRKLFLVNA 249
           V      Q  D+ R+   +   L+  
Sbjct: 407 VSCNVATQARDIERL-SKKGYKLIKI 431


>gi|237739628|ref|ZP_04570109.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 2_1_31]
 gi|229423236|gb|EEO38283.1| ribosomal protein L11 methyltransferase [Fusobacterium sp. 2_1_31]
          Length = 313

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 3/88 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      I+D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 162 LLLKLMEEQDFTNKTIIDIGTGSGILMIA-GKLLGAGEVYGTDIDEFSMEVAKENLLLNN 220

Query: 146 VS-ERFDTLQSDWFSSVE-GLFDVIVSN 171
           +S +    L+ +    +E   FD++V N
Sbjct: 221 ISLDEVKLLKGNLLEVIENKKFDIVVCN 248


>gi|258406276|ref|YP_003199018.1| ribosomal L11 methyltransferase [Desulfohalobium retbaense DSM
           5692]
 gi|257798503|gb|ACV69440.1| ribosomal L11 methyltransferase [Desulfohalobium retbaense DSM
           5692]
          Length = 296

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 57/168 (33%), Gaps = 34/168 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T  L   ALA     + +      LDLGTG+G + +A  K      G+G+DI   A+  A
Sbjct: 137 TTALCLQALAKDRDSLPQFAP--FLDLGTGSGILGIACAK--CGLPGLGLDIDPVAVANA 192

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + N + N        + S         F +I++N   I +  +  +              
Sbjct: 193 RENLLLNETPGLSVAVGSLNALRKGTTFGLIIAN---ILARPLQDM-------------- 235

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                       A  +  HL   G   +  I   Q   V R ++   L
Sbjct: 236 ------------AAELIAHLRPGGRLILSGILATQAETVSRCYQECGL 271


>gi|110639723|ref|YP_679933.1| type I restriction-modification system, M subunit [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110282404|gb|ABG60590.1| type I restriction-modification system, M subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 528

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 82/206 (39%), Gaps = 21/206 (10%)

Query: 28  SVLDDRQRFFLT-NAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL 86
            VL    +       +   +  +S   ++G   F +     + + + P+  +++L     
Sbjct: 172 KVLTHLDKIDFKLEDLESDVLGDSYEYLIG--QFASGAGKKAGEFYTPQQVSKILAKIV- 228

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNG 145
                  EK  +  + D   G+G++ L + +E     K  G +++     +A+ N + +G
Sbjct: 229 -----TTEKHKLKSVYDPTCGSGSLLLRVAREVKDVAKFYGQEMNRTTYNLARMNMILHG 283

Query: 146 VSER-FDTLQSDWFSSVEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDP--RISLDGG 199
           V  R FD  Q D     +     F+ IV+NPP+      + L L    F    +++    
Sbjct: 284 VHYRKFDIKQEDTLEHPQHMGQQFEAIVANPPFSAQWSANPLHLSDDRFSQYGKLAPASK 343

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
            D  +  + +      HL ++G+ ++
Sbjct: 344 AD-YAFVQHMVH----HLAENGIMAL 364


>gi|325688312|gb|EGD30331.1| O-methyltransferase [Streptococcus sanguinis SK72]
          Length = 227

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMVELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFEE 185


>gi|295394400|ref|ZP_06804624.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972752|gb|EFG48603.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 379

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +       P       +R+ DL  G G   L +    P  +  GV+++  A+E A+  A 
Sbjct: 216 EWVSKAQAPATSHGRDLRVWDLFCGVGGFALHVA--GPGRQVTGVEVAPAAVESAREVAG 273

Query: 143 TNGVSERFDTLQSDWFSSVEGLF-DVIVSNPP 173
            N +   F    +  +S  +    DV++ NPP
Sbjct: 274 ENDLGLNFICADAAQWSRQQTQVPDVLIVNPP 305


>gi|294340978|emb|CAZ89373.1| putative Ribosomal protein L11 methyltransferase (L11 Mtase) (prmA)
           [Thiomonas sp. 3As]
          Length = 298

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 34/132 (25%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +    + +LD G G+G + +A  K       VGVDI   A+   ++NA  N V+ +    
Sbjct: 162 QTPSQLSVLDYGCGSGILAIAAAKFGAGP-VVGVDIDPDAVLATEANAAANDVTVQAGLP 220

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                   +  FD++V+N           L   ++   P I+                  
Sbjct: 221 DKVA----DAQFDIVVAN----------ILSAPLKLLAPAIA------------------ 248

Query: 214 SRHLNKDGLCSV 225
             H+   G   +
Sbjct: 249 -AHVKPGGWLVL 259


>gi|289192084|ref|YP_003458025.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
 gi|288938534|gb|ADC69289.1| Methyltransferase type 11 [Methanocaldococcus sp. FS406-22]
          Length = 385

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL++A+ N   N +  ++++ ++
Sbjct: 211 KEGDRVLDICCYTGGFSVHAAIR--GAEVVGVDLSKKALKLAEENMELNNIPKDKYEFIE 268

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVDC 182
              F  +E        FDV++ +PP         
Sbjct: 269 GSAFKVMEEFIEDGERFDVVILDPPAFAQSKKAL 302


>gi|262392969|ref|YP_003284823.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25]
 gi|262336563|gb|ACY50358.1| ribosomal protein L11 methyltransferase [Vibrio sp. Ex25]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDIPDPDAVNVMLDPGLAFGTGTHPTTALCLEWLESMDLSGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +       +  EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVADKLEVYLPQ--NQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|288941779|ref|YP_003444019.1| hypothetical protein Alvin_2065 [Allochromatium vinosum DSM 180]
 gi|288897151|gb|ADC62987.1| protein of unknown function Met10 [Allochromatium vinosum DSM 180]
          Length = 398

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 62/178 (34%), Gaps = 19/178 (10%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ES-IHRILGWRDF------YNVRLTLSSD 70
             +++   + VL  +      +  VR L+  E  +  +LG            +   +   
Sbjct: 138 RAEILAALEQVLRPQAIVLRNDTSVRELEGLEPGVEHVLGEPSGDWILTEQGLEFAIDPM 197

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             +   +T    D A   +          R+LD+ +  GA  L             VD S
Sbjct: 198 RGQ---KTGWFFDQAENRAR-LARYGVGERVLDVCSYVGAWGLR-AAALGASDVTCVDAS 252

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDC 182
             ALE  +SNA  NG+S R   LQ D F  +         FD ++ +PP       D 
Sbjct: 253 ADALERLQSNAERNGLSARVRPLQGDAFEVLRQLRDQGRRFDTVLLDPPAFIKRRKDE 310


>gi|302386126|ref|YP_003821948.1| RNA methyltransferase, TrmA family [Clostridium saccharolyticum
           WM1]
 gi|302196754|gb|ADL04325.1| RNA methyltransferase, TrmA family [Clostridium saccharolyticum
           WM1]
          Length = 453

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGT 108
           + G   FY     ++  +S  +F    +T  L    L  ++ R       +++ DL +GT
Sbjct: 262 LYGQDYFYEELLGMKFKISPFSFF---QTNSLGAEVLYETVRRYVGETKDKVVFDLYSGT 318

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   +    P  K  VGV+I  +A++ AK N   NG+ E  + +  D       +   
Sbjct: 319 GTIAQMIA---PVAKKVVGVEIVKEAVDAAKENTRLNGL-ENCEFIDGDVLKVIDELPDK 374

Query: 165 FDVIVSNPP 173
            D+I+ +PP
Sbjct: 375 PDLIILDPP 383


>gi|270156714|ref|ZP_06185371.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269988739|gb|EEZ94993.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 248

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGV 127
            D +    ++  L     A  L        +R+LDL  G G + + L    P   +   +
Sbjct: 20  PDEYHFSLDSIYLARFV-ATQLQSHTDLGSLRVLDLCAGCGVIGMELSWHLPAIRQIDFI 78

Query: 128 DISCKALEIA---KSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESV 178
           +I     E     ++N     +  R+  L  D       EG FD+ +SNPPY ++ 
Sbjct: 79  EIQDIYTEYFYQNQANISRPELQFRWHLLNYDALHEKKWEGKFDMTISNPPYFQAG 134


>gi|149174356|ref|ZP_01852983.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Planctomyces maris DSM 8797]
 gi|148846901|gb|EDL61237.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Planctomyces maris DSM 8797]
          Length = 367

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 27/142 (19%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL+ +    + +D + IL+LG G G++ L L +  P  +   V  S    E  +  AV  
Sbjct: 111 ALSETCQHADIQDGMSILELGCGWGSLTLWLAENYPDSRITAVSNSHSQREYIEQQAVAR 170

Query: 145 GVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV++R   + +D    + E  +D +VS            +   +R+++            
Sbjct: 171 GVADRIQVITADMNEFIPEETYDRVVSV----------EMFEHMRNYE------------ 208

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                +   ++  LN+ G   +
Sbjct: 209 ----QLLQRIAGWLNEQGKLLI 226


>gi|332530694|ref|ZP_08406625.1| ribosomal protein L11 methyltransferase [Hylemonella gracilis ATCC
           19624]
 gi|332039862|gb|EGI76257.1| ribosomal protein L11 methyltransferase [Hylemonella gracilis ATCC
           19624]
          Length = 297

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 88  FSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
             L  I    V  +R+LD G G+G + +A  K         +DI   A+   + NA  NG
Sbjct: 152 MCLRWIATHPVRDLRVLDYGCGSGILAIAAAK-FGATDIDALDIDEAAVASTRLNAEANG 210

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V     TL++    +V+G + V+++N
Sbjct: 211 V-----TLRAGLPDAVQGHYPVVLAN 231


>gi|284031360|ref|YP_003381291.1| type 12 methyltransferase [Kribbella flavida DSM 17836]
 gi|283810653|gb|ADB32492.1| Methyltransferase type 12 [Kribbella flavida DSM 17836]
          Length = 211

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 28/130 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
               LDLG G GA  + L      +    VDIS  ALE A  +A   GV++R D  Q + 
Sbjct: 40  PGTALDLGCGEGADAIWLA--GQGWTVTAVDISAVALERAARHAEQAGVADRIDWQQHEL 97

Query: 158 FSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             S  +G +D++ +   +  + +            PR +             I    SR 
Sbjct: 98  GKSFPDGQYDLVSAQFLHSVTEL------------PREA-------------ILRTASRA 132

Query: 217 LNKDGLCSVE 226
           +   G+  +E
Sbjct: 133 VAPGGVLLIE 142


>gi|167623152|ref|YP_001673446.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|226725389|sp|B0TK00|RUMA_SHEHH RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|167353174|gb|ABZ75787.1| RNA methyltransferase, TrmA family [Shewanella halifaxensis
           HAW-EB4]
          Length = 445

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 11/125 (8%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           G + +Y          F P    ++   +  + ++ ++  +  +   R+LDL  G G   
Sbjct: 255 GEQPYYGFDDNQVKLNFSPGNFIQVNAQVNQAMVSQAVEWLSPKADERVLDLFCGIGNFS 314

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDV 167
           L L K+    + +GV+     +E A+ NA  +G+ ++     +D  + +      G  D 
Sbjct: 315 LPLAKD--GAEVIGVEGVQAMVEQARINAKQSGL-DKVSFYHADLSADLSKEPWLGKVDK 371

Query: 168 IVSNP 172
           ++ +P
Sbjct: 372 MLIDP 376


>gi|146323517|ref|XP_754131.2| TAM domain methyltransferase [Aspergillus fumigatus Af293]
 gi|129558251|gb|EAL92093.2| TAM domain methyltransferase, putative [Aspergillus fumigatus
           Af293]
          Length = 336

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 41/133 (30%), Gaps = 41/133 (30%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----F 150
            RDV RILDLGTGTG   + +  E P  K +G D+S               V        
Sbjct: 99  PRDVSRILDLGTGTGIWAIEMADEFPTAKVIGNDLSP---------IQPTWVPPNLSFEV 149

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           D  +SDW       FD I              L   V D++                 + 
Sbjct: 150 DDFESDW--EYSKPFDFI----------HARDLQGSVSDYN----------------RLV 181

Query: 211 DGVSRHLNKDGLC 223
                +L   G  
Sbjct: 182 AQAFANLAPGGWF 194


>gi|118089359|ref|XP_420190.2| PREDICTED: similar to CXorf34 protein [Gallus gallus]
          Length = 478

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 12/111 (10%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              HE      + G      D  ++R  +S D F     +       L   +  + +   
Sbjct: 262 RCSHEHSPFQLLHGEPHIFEDVLDLRFRISPDAFFQVNTSGA---EVLYRVVRELSQAAG 318

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
             +L D+  GTG + L+L +     K +GV+I  KA+E A+ NA  NG+S 
Sbjct: 319 DTVLLDVCCGTGTIGLSLARHV--SKVIGVEIVQKAIEDARWNAAFNGISN 367


>gi|27364635|ref|NP_760163.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6]
 gi|320155029|ref|YP_004187408.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus
           MO6-24/O]
 gi|38605292|sp|Q8DD03|PRMA_VIBVU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|27360780|gb|AAO09690.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus CMCP6]
 gi|319930341|gb|ADV85205.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus
           MO6-24/O]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ D      
Sbjct: 160 GKTVIDFGCGSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAQRNGVADQLDVYLPQ- 217

Query: 158 FSSVEGLF-DVIVSN 171
               EGL  DV+V+N
Sbjct: 218 -DQPEGLLADVVVAN 231


>gi|258574653|ref|XP_002541508.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901774|gb|EEP76175.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 175

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  +          ++D   G G   +A  + + + +   ++     L+ A
Sbjct: 54  TPEPVATKIADHVAAARSLKKCIMIDAFAGVGGNAIAFARSNKWKRVYAIEKDPAVLQCA 113

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGL 185
           K NA   GV ++    + D F ++       G + VI ++PP+   +  +   L
Sbjct: 114 KHNAKIYGVEDKITWFEGDCFETIRLYLKDLGPYSVIFASPPWGGELTEESHPL 167


>gi|315633698|ref|ZP_07888988.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis
           ATCC 33393]
 gi|315477740|gb|EFU68482.1| ribosomal protein L11 methyltransferase [Aggregatibacter segnis
           ATCC 33393]
          Length = 294

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSDE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|331236059|ref|XP_003330689.1| hypothetical protein PGTG_12226 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309309679|gb|EFP86270.1| hypothetical protein PGTG_12226 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 390

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 14/129 (10%)

Query: 69  SDTFEP-RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALLKESPFFKGVG 126
            D   P R +  L +   L  S+   +    V ++D+GTG+ A+  L L +     + + 
Sbjct: 69  RDLQIPGRLDYCLWLIDVLKASVELSDGGAGVLVIDVGTGSSAIYPLLLTQLLKNVRVIA 128

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-----------VEGLFDVIVSNPP-Y 174
            +I   + + A  N   N +  R    ++                 + +  + + NPP Y
Sbjct: 129 TEIDQSSYDSAMRNVTQNDLVNRITLQKTSSTDPTILPIASISQEPDQMISITMCNPPFY 188

Query: 175 IESVIVDCL 183
                +D L
Sbjct: 189 SSQDEIDAL 197


>gi|157164415|ref|YP_001467284.1| ribosomal protein L11 methyltransferase [Campylobacter concisus
           13826]
 gi|254782833|sp|A7ZES6|PRMA_CAMC1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|112801954|gb|EAT99298.1| ribosomal protein L11 methyltransferase [Campylobacter concisus
           13826]
          Length = 277

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 61/208 (29%)

Query: 64  RLTLSSDTFEPRPE------TELLVDSALAFSLPRIE------------KRDVVRILDLG 105
            + +      P  E      T +++D ALAF     E             +     LD+G
Sbjct: 92  PILVDKIYIRPSWEESLSGVTNIIIDPALAFGSGHHESTNSCLQLLQKYAKSGDTALDVG 151

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
            G+G + +AL K     K    D   +A + + SNA  N    +F+ + +   +++E  +
Sbjct: 152 CGSGILSIALAKL--GCKVDACDTDEQATQSSLSNAQLN--EVKFNKIWTGSIANLEQKY 207

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D++V+N                      I+             +++ + + L K G   +
Sbjct: 208 DIVVAN---------------------IIA--------DVIFMLSNDLKKSLKKGGYLVL 238

Query: 226 EIGYNQKVDVVRIFESRKLFLVNAFKDY 253
                       I    +  + + FKD 
Sbjct: 239 ----------SGILNKYEDRIKDTFKDL 256


>gi|227832990|ref|YP_002834697.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182522|ref|ZP_06041943.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975]
 gi|227454006|gb|ACP32759.1| putative DNA methylase [Corynebacterium aurimucosum ATCC 700975]
          Length = 200

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 17/158 (10%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G        + +      P  +        L  SL         R+LDL  G+GA+ L
Sbjct: 5   IAGEA--RGRTIKVPEAGTRPTSDRA---REGLFSSLNVRWGFIDSRVLDLFAGSGALGL 59

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNA---VTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                    + V V+ +  A+++ + N        V  R     S   ++  G FD++++
Sbjct: 60  EAASRGAE-EVVLVENNAAAVKVIRHNIGVVKHPRVEVREMKASSYLATAPRGYFDMVLA 118

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           +PPY      D +   +   +P  +LD   D +     
Sbjct: 119 DPPY----EFDDVDGLLAAIEP--ALD--DDAIVVIER 148


>gi|212224822|ref|YP_002308058.1| Hypothetical N6-adenine-specific DNA methylase [Thermococcus
           onnurineus NA1]
 gi|212009779|gb|ACJ17161.1| Hypothetical N6-adenine-specific DNA methylase [Thermococcus
           onnurineus NA1]
          Length = 365

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 29/201 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRP----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++G   F  +  T    +   RP    +    + +++A +L  + + D    +D   G+G
Sbjct: 171 LIGDVFFLGID-TTGDSSLHKRPWRVYDHPAHLKASIANALIELAEPDGGSFIDPFCGSG 229

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDV 167
            + + L       K +G++   K L  A+ NA+  GV +R D +  D    S      D 
Sbjct: 230 TIPIELALGGYGGKIIGLEKYRKHLRGAEMNALAAGVYDRIDFILGDATRLSEYVESADF 289

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            VSN PY   +    +                      Y      +++ L K G+     
Sbjct: 290 AVSNLPYGLKIGRKSMIP------------------KLYMQFFAELAKVLEKRGVFI--- 328

Query: 228 GYNQKVDVVRIFESRKLFLVN 248
              +K  + +  E     +++
Sbjct: 329 -TTEKRAIEKAIEDSGFKIIH 348


>gi|134034825|gb|ABO45738.1| microcystin synthetase N-methyltranserase domain [Microcystis sp.
           N-C 324/1]
          Length = 497

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         E I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSEGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 155

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 156 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 211

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 212 -----------SVVRYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 244

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 245 VRNLQLMEAFHADVELYK 262


>gi|60681329|ref|YP_211473.1| putative type I restriction enzyme methylase [Bacteroides fragilis
           NCTC 9343]
 gi|60492763|emb|CAH07537.1| putative type I restriction enzyme methylase [Bacteroides fragilis
           NCTC 9343]
          Length = 513

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 61/158 (38%), Gaps = 13/158 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  +++L     A      +K  V  + D   G+G++ L++ KE       G + + 
Sbjct: 201 YTPQQVSKVLAQIVTA------DKERVRNVYDPTCGSGSLLLSVAKEGFAEFIYGQEKNP 254

Query: 132 KALEIAKSN-AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N  + N   ++FD    D     +    +FD IV+NPP+      D      
Sbjct: 255 TTYNLARMNMLLHNKRYDKFDIRSGDTLEDDQFENEVFDAIVANPPFSAQWSADSKFNTD 314

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             F    +L       + Y  I   +  HL+  G  + 
Sbjct: 315 DRFSRAGALAPKSK--ADYAFILHMIH-HLHDGGTMAC 349


>gi|134103183|ref|YP_001108844.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|291003875|ref|ZP_06561848.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915806|emb|CAM05919.1| cyclopropane-fatty-acyl-phospholipid synthase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 412

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           F +  +T SS  F  RP+T  L D     +  +L         R+L++GTG G   LAL 
Sbjct: 155 FLDETMTYSSALF--RPDTTDLADAQRHKIDRALDVAGVHAGTRLLEIGTGWG--SLALR 210

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                 +   + +S +  ++A+      G+++R +    D+    +G +D +VS
Sbjct: 211 AAERGARVTSLTLSAEQRKLARQRIAAAGLADRVEVHLRDYREE-DGRYDAVVS 263


>gi|52549299|gb|AAU83148.1| predicted methyltransferase [uncultured archaeon GZfos26G2]
          Length = 367

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           ++E+     I+D+  G G+  + + K +P      +DI+  A+     N   NGV    +
Sbjct: 184 QVERSKNELIIDMFAGVGSFSIQIAKRAPQSIVTAIDINPDAIRYLHENMEQNGVR-NIE 242

Query: 152 TLQSD---WFSSVEGLFDVIVSNPP 173
            ++ D    +   E   + I+ N P
Sbjct: 243 PIEGDVSGIYMKFENKANRIIMNLP 267


>gi|74004513|ref|XP_535953.2| PREDICTED: similar to CG9666-PA isoform 2 [Canis familiaris]
          Length = 209

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALE+   N   
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEVFNRNVEE 96

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
             ++   D +Q D  S    +   FD ++ NPP+
Sbjct: 97  FELT-NVDMVQCDVRSLSNRMSKSFDTVIMNPPF 129


>gi|24380388|ref|NP_722343.1| ribosomal protein L11 methyltransferase [Streptococcus mutans
           UA159]
 gi|38605301|sp|Q8DS02|PRMA_STRMU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|24378410|gb|AAN59649.1|AE015027_7 putative methyltransferase [Streptococcus mutans UA159]
          Length = 317

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    ++D+GTG+G + +A        +    D+   A+ +A+ N   N  +E       
Sbjct: 170 RGGETVIDVGTGSGVLSVA-SSLLGAKEIFAYDLDDVAVRVAQENIDLNVGTENIHVTAG 228

Query: 156 DWFSSVEGLFDVIVSN 171
           D    +    DVIV+N
Sbjct: 229 DLLKGIAIEADVIVAN 244


>gi|321253989|ref|XP_003192923.1| hypothetical protein CGB_C6130W [Cryptococcus gattii WM276]
 gi|317459392|gb|ADV21136.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 485

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 16/150 (10%)

Query: 61  YNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLALL 116
           +++ + L  D      P     +     L   LP    R  +RILD+GTG  A+  + L 
Sbjct: 58  WDLDVDLREDRLCPTIPNRLDYIYHMLDLEPHLPSSSLRP-LRILDVGTGATAIYPILLA 116

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL------QSDWFSSVEGL-----F 165
           +  P  + V  +I   +   AK+    N +S    ++          F  ++       +
Sbjct: 117 RLRPDSRIVATEIDESSYRHAKATLEKNNISSSSISILKSPTPDPILFPLLQSKGNCEEW 176

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           D  + NPP+  S      G+E++D     +
Sbjct: 177 DFTICNPPFFASTQEMLQGMELKDRQAHAA 206


>gi|291520682|emb|CBK75903.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [Butyrivibrio fibrisolvens 16/4]
          Length = 263

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 59/180 (32%), Gaps = 39/180 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAK 138
             +      +   D  + LD+G G+GA+ +A  K++P  + VG+D      +  +  + +
Sbjct: 82  QIIEGISAYVNVPDGGKCLDVGCGSGALTIACAKKNPNAEFVGIDRWGKEYASFSKNLCE 141

Query: 139 SNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           +NA   GVS      Q D    S V+  FD + SN  Y      D               
Sbjct: 142 NNAKAEGVS-NVSFGQGDATKLSFVDETFDAVTSNYVYHNIPSKDR-------------- 186

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLFLVNAF 250
                     + I     R L K G  ++         Y      V+  +      V   
Sbjct: 187 ----------QAILLETLRTLKKGGTFAI-HDIMSKGKYGDMEAFVKQLKDMGYEEVKLI 235


>gi|159483505|ref|XP_001699801.1| tRNA (uracil-5)-methyltransferase [Chlamydomonas reinhardtii]
 gi|158281743|gb|EDP07497.1| tRNA (uracil-5)-methyltransferase [Chlamydomonas reinhardtii]
          Length = 206

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 20/126 (15%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
                R    +LD+  GTG + L L   S   K VGVD    A+E A+ NA  NG+    
Sbjct: 38  DWAAARPKTLLLDICCGTGTIGLMLA--SKVAKVVGVDNVESAVEDARVNAALNGIG-NA 94

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL--SHYRT 208
           + +      +++ + D+  +N  Y            V   DP  +      GL  S  R 
Sbjct: 95  EFVAGKAEDALQSILDLHAANDAY---------EDVVAVCDPPRA------GLHKSVLRA 139

Query: 209 IADGVS 214
           + D   
Sbjct: 140 LLDCAK 145


>gi|148242984|ref|YP_001228141.1| SAM-dependent methyltransferase [Synechococcus sp. RCC307]
 gi|147851294|emb|CAK28788.1| SAM-dependent methyltransferase [Synechococcus sp. RCC307]
          Length = 398

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 29/162 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+  + +     +R  +RILD G GTG     L   +P  + + VDIS   L +A+    
Sbjct: 45  DAHSSCAGVLPPQRPTLRILDAGCGTGVSTDYLAHLNPGAEILAVDISAGTLAMAQERCQ 104

Query: 143 TNGVSER--FDTLQSDWFS-SVEGLFDVIVS--------NPPYIESVIVDCLGL------ 185
            +G  E+      Q      + EG FD I S        NP      +   L        
Sbjct: 105 RSGAIEQATVRFQQRSLLDLAGEGPFDHINSVGVLHHLDNPQAGLKALAPLLAPGGILHL 164

Query: 186 ----EVRDFDPR-----ISLDG---GIDGLSHYRTIADGVSR 215
               +   ++       + L G   G +GL   R +   +  
Sbjct: 165 FLYADAGRWEIHRVQRALGLLGAGYGEEGLRLGRALLRELPE 206


>gi|121535706|ref|ZP_01667510.1| protein of unknown function Met10 [Thermosinus carboxydivorans
           Nor1]
 gi|121305737|gb|EAX46675.1| protein of unknown function Met10 [Thermosinus carboxydivorans
           Nor1]
          Length = 393

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD    TG+  +         +   +DIS  A+E+A+ NA  NGV++R     ++ F +
Sbjct: 222 VLDCFCHTGSFAVHAAVYGAK-RVQAIDISEMAIELARKNAALNGVADRCSFEVANAFDA 280

Query: 161 VEG------LFDVIVSNPP 173
           +         FD+++ +PP
Sbjct: 281 LRELSDERRQFDIVILDPP 299


>gi|150021621|ref|YP_001306975.1| methyltransferase small [Thermosipho melanesiensis BI429]
 gi|149794142|gb|ABR31590.1| methyltransferase small [Thermosipho melanesiensis BI429]
          Length = 198

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 64/180 (35%), Gaps = 32/180 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD A    +  +   +   ILD+G G G + + L KE+P  K    DI+ +A+E AK NA
Sbjct: 43  VDKATKILIENVRISNG-NILDIGCGYGIIGITLKKENPDIKLYMSDINERAVEFAKINA 101

Query: 142 VTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             N ++   D  +   F   E   FD IVSNPP +                         
Sbjct: 102 KDNNIAA--DIRKGYLFEVWENEKFDHIVSNPPIVA------------------------ 135

Query: 201 DGLSHYRTIADGVSRHLNKDGLC-SVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDRV 259
            G   +  + +     LN  G    V         +    +S     V      GG  RV
Sbjct: 136 -GKKVWMELIEKSLDFLNDGGTLQLVAFHNKGGRRIKEYMKSI-FGNVEELCKEGGI-RV 192


>gi|86751583|ref|YP_488079.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris HaA2]
 gi|86574611|gb|ABD09168.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris HaA2]
          Length = 341

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 38/151 (25%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC------KALEI 136
           + AL  ++   + RD   IL+LG G G++ LA+ +  P+ + V V  S       +A  I
Sbjct: 102 EEALRLTMDHADLRDGQSILELGCGWGSLSLAMAQRFPYARIVAVSNSASQRNYIEAEAI 161

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           A+        + +  T   + F      FD IVS                V  F+  ++ 
Sbjct: 162 ARD-----LPNLQVVTSDMNVFEP-HAQFDRIVS----------------VEMFEHMMNW 199

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     R +   +   L   GL  + I
Sbjct: 200 ----------RKLLTWIHGWLKPGGLFFMHI 220


>gi|56750156|ref|YP_170857.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
 gi|56685115|dbj|BAD78337.1| membrane-associated protein [Synechococcus elongatus PCC 6301]
          Length = 211

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 31/162 (19%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
             T+ + +++ R +    + + +  +L RI       +LDLG GTG++   L  + P  K
Sbjct: 11  EYTILASSYDRRWDFY--IHATIQETLKRITISSQASVLDLGCGTGSLLQQLAAQYPTVK 68

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
             G+DIS   L IA+        S +  T +++     E  FD+++S      + +    
Sbjct: 69  LSGLDISAAMLAIAR---QKLPDSVKLQTGEANELPFPEHHFDLVIS------TSVFHYF 119

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                                    +   ++R L   G   +
Sbjct: 120 QNP--------------------EKVLQEITRVLKPQGCLIL 141


>gi|37681321|ref|NP_935930.1| ribosomal protein L11 methyltransferase [Vibrio vulnificus YJ016]
 gi|38605128|sp|P60094|PRMA_VIBVY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|37200072|dbj|BAC95901.1| ribosomal protein L11 methylase [Vibrio vulnificus YJ016]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ D      
Sbjct: 160 GKTVIDFGCGSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAQRNGVADQLDVYLPQ- 217

Query: 158 FSSVEGLF-DVIVSN 171
               EGL  DV+V+N
Sbjct: 218 -DQPEGLLADVVVAN 231


>gi|308172559|ref|YP_003919264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM
           7]
 gi|307605423|emb|CBI41794.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens DSM
           7]
 gi|328552324|gb|AEB22816.1| RNA methyltransferase, TrmA family protein [Bacillus
           amyloliquefaciens TA208]
 gi|328910668|gb|AEB62264.1| RNA methyltransferase, TrmA family [Bacillus amyloliquefaciens LL3]
          Length = 458

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGKETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GITADTLVVDPP 390


>gi|239617288|ref|YP_002940610.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
 gi|239506119|gb|ACR79606.1| methyltransferase small [Kosmotoga olearia TBF 19.5.1]
          Length = 393

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +   +++    R LDL + TG   + + K     + V VD S + LE+A+ NA  N V
Sbjct: 208 KMARKIVKRFAFKRALDLFSFTGGFGINMAKA--GAEVVCVDKSGEDLEVAELNAALNDV 265

Query: 147 SERFDTLQSDWFSSV-----EGLFDVIVSNPP 173
            ER   +Q D F  +     +  FD++V +PP
Sbjct: 266 KERMSFVQMDVFKYLKSLEKKEQFDIVVLDPP 297


>gi|148240360|ref|YP_001225747.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803]
 gi|147848899|emb|CAK24450.1| SAM-dependent methyltransferase [Synechococcus sp. WH 7803]
          Length = 406

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 82  VDSALAFSLP-RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD A+  + P R +     RILD G GTG     L   +P  + + VDIS  AL +A+  
Sbjct: 44  VDGAVRGATPVRADAGTPPRILDAGCGTGVSTDYLCHLNPGAEILAVDISAGALGLARER 103

Query: 141 AVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
              +G +++  +L+ +  S +    EG FD I S
Sbjct: 104 LHRSGGAQQVRSLRQEQRSLLDLKDEGPFDYINS 137


>gi|296329183|ref|ZP_06871684.1| ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296153539|gb|EFG94356.1| ribosomal protein L11 methyltransferase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 310

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L   +      ++D+GTG+G + +A  K     +  G DI   ++E+AK N + N 
Sbjct: 160 LLLKLMEEQDFSNKSVIDIGTGSGILMIA-GKILGAGEVYGTDIDEFSMEVAKENLILNN 218

Query: 146 VSER-FDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGG 199
           +S      L+ +    +E   FD++V N   I + I+  L  E++    +  I L  G
Sbjct: 219 ISLNDVKLLKGNLLEVIENKKFDIVVCN---ILADILVKLLDEIKYILKENSIVLFSG 273


>gi|295838378|ref|ZP_06825311.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SPB74]
 gi|295826983|gb|EDY42757.2| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces sp.
           SPB74]
          Length = 437

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  R  +R+LD+G G G++ L   +E    + VGV +S +    A+  A   G
Sbjct: 193 LDLIATKLGLRPGMRLLDVGCGWGSMALYAAREY-GVEVVGVTLSREQAAYARKRAAEEG 251

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++ +    D+    +G FD I S            +   V              G + 
Sbjct: 252 LGDKVEIRVQDYRDVRDGPFDAISS----------IGMAEHV--------------GAAR 287

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 288 YEEYAHDLFALLKPGGRLL 306


>gi|325679453|ref|ZP_08159035.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Ruminococcus albus 8]
 gi|324108852|gb|EGC03086.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Ruminococcus albus 8]
          Length = 397

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 13/127 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I    +    R  +S  +F      +   +   + ++      + VR++D   GTG + 
Sbjct: 203 YI--EDELCGCRFRISPASFYQVNPLQT--EKLYSCAVEAAGISEGVRVIDAYCGTGTIG 258

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FD 166
           +   K     +  GV+++  A   A  NA  NG+ E       D    ++ +       D
Sbjct: 259 IICAKN--GAEVTGVELNKSACRDAHKNAELNGL-ENIKFCNDDAGKFMQAMASKGEGCD 315

Query: 167 VIVSNPP 173
           V++ +PP
Sbjct: 316 VLIMDPP 322


>gi|261821243|ref|YP_003259349.1| 23S rRNA methyluridine methyltransferase [Pectobacterium wasabiae
           WPP163]
 gi|261605256|gb|ACX87742.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Pectobacterium
           wasabiae WPP163]
          Length = 375

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +   + + ++  + DL  G G   L     SP  +  G++IS +A+  A+ +A   G+
Sbjct: 223 ATARDWVAELNITSMWDLFCGVGGFGLHCA--SPEMRLTGIEISAEAIACARRSAEQLGL 280

Query: 147 -SERFDTLQSDWFS-SVEGLFDVIVSNPP 173
               F  L S  F+ +   + D+++ NPP
Sbjct: 281 KQVEFQALDSTQFATAKSEIPDLVLVNPP 309


>gi|157737450|ref|YP_001490133.1| cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter butzleri
           RM4018]
 gi|157699304|gb|ABV67464.1| cyclopropane-fatty-acyl-phospholipid synthase [Arcobacter butzleri
           RM4018]
          Length = 408

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  ++  ++L++G+G GA+ L L       +   V +S +  ++ ++    + 
Sbjct: 169 LEKLSSKLNLKEGSKVLEIGSGWGAMALHLA-NYKGCEVTTVTLSVEQKKLCENRFKEHN 227

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V ++ D L  D +  + G FD I++                V  F+          G  +
Sbjct: 228 VEDKIDILLKD-YRDLNGKFDAIIA----------------VEMFE--------AVGKEY 262

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           +          L  +G+  +
Sbjct: 263 FHIFFKKCQELLKPNGVLVL 282


>gi|171545987|ref|NP_001116415.1| tRNA (uracil-5-)-methyltransferase homolog-B [Danio rerio]
 gi|141795408|gb|AAI39683.1| Zgc:162982 protein [Danio rerio]
          Length = 473

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)

Query: 45  SLKHESIHR--ILGWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKR 96
              HE      + G    Y      +  +S D+F    R   E L  +    S P +   
Sbjct: 257 RCSHEQSQYQLLYGQTHIYEEVLGFKFRISPDSFFQVNREAAEALYKTVAELSQPCV--- 313

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSE------R 149
               +LD+  GTGA+ ++L   SP   + +G+++  +A+E AK NA  N V        +
Sbjct: 314 -GGTLLDVCCGTGAIGISL---SPQMERVIGIELIEQAVEDAKFNAALNRVCNCEFLAGK 369

Query: 150 FDTLQSDWFSSV--EGLFDVIVSNP 172
            + +  D   S+  +G    +V NP
Sbjct: 370 AEVVLPDLMGSLSSDGGLTAVV-NP 393


>gi|108760235|ref|YP_629854.1| putative O-methyltransferase [Myxococcus xanthus DK 1622]
 gi|108464115|gb|ABF89300.1| putative O-methyltransferase [Myxococcus xanthus DK 1622]
          Length = 507

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 27/141 (19%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A +L  +   +   +LD+GTG+G    A  + S        D     LE  + N     V
Sbjct: 311 AATLAGVRPLEGAAVLDIGTGSGVWGAAFARTSSSTHVTYFD-QAIVLEQVRRNVAKLEV 369

Query: 147 SERFDTLQSDWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           ++R      + F+   G   FDVI+     +  V+      +V D               
Sbjct: 370 ADRARFWPGNLFTQDFGAADFDVII-----LPQVLNVLSPKDVPD--------------- 409

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               I   V+R L  DG+  +
Sbjct: 410 ----IFARVARALRPDGILVI 426


>gi|88602952|ref|YP_503130.1| hypothetical protein Mhun_1685 [Methanospirillum hungatei JF-1]
 gi|88188414|gb|ABD41411.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
          Length = 264

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 63/218 (28%), Gaps = 59/218 (27%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKES 119
            +V L  S     PR    L  D A AF+   +       +ILD+G G+G   L L +  
Sbjct: 16  MDVTLICSMFEGLPRQGPGL--DEATAFAFSFLPPDAKRGKILDIGCGSGMQDLTLARIC 73

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPYIES 177
           P  +    D+    L+     A   G+  R  T +   D     E  FD+I +       
Sbjct: 74  PDCQITATDLHQPFLDDLTRRAQKAGLDGRITTRRASMDNLPFDEKSFDIIWA------- 126

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV---SRHLNKDGLCSV--------- 225
                                  +G +    I   +    + L   G   +         
Sbjct: 127 -----------------------EGSAFIIGILPALQTWKKFLKPGGYMMISDCTWFTDS 163

Query: 226 ----------EIGYN--QKVDVVRIFESRKLFLVNAFK 251
                     EI  +         +  +    LV +F+
Sbjct: 164 PSEECAQFMHEISPDMPTVAQAEEMIRAEGYSLVGSFR 201


>gi|313104036|sp|A4QP75|TRM2B_DANRE RecName: Full=tRNA (uracil-5-)-methyltransferase homolog-B;
           AltName: Full=TRM2 homolog B
 gi|220676971|emb|CAX12082.1| novel protein (zgc:162982) [Danio rerio]
          Length = 480

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)

Query: 45  SLKHESIHR--ILGWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKR 96
              HE      + G    Y      +  +S D+F    R   E L  +    S P +   
Sbjct: 264 RCSHEQSQYQLLYGQTHIYEEVLGFKFRISPDSFFQVNREAAEALYKTVAELSQPCV--- 320

Query: 97  DVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSE------R 149
               +LD+  GTGA+ ++L   SP   + +G+++  +A+E AK NA  N V        +
Sbjct: 321 -GGTLLDVCCGTGAIGISL---SPQMERVIGIELIEQAVEDAKFNAALNRVCNCEFLAGK 376

Query: 150 FDTLQSDWFSSV--EGLFDVIVSNP 172
            + +  D   S+  +G    +V NP
Sbjct: 377 AEVVLPDLMGSLSSDGGLTAVV-NP 400


>gi|324503326|gb|ADY41448.1| Methyltransferase [Ascaris suum]
          Length = 491

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 21/159 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           + + + L SD   PR    L     +   L        V  +D+GTG   +   L  +  
Sbjct: 64  FGLDVELPSDCLVPRVPQRLNYVLFIDDLLTMNGIDTDVLGIDIGTGASCIYALLGTKQC 123

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFD--------TLQSDWFSSVEGLFDVIVSNP 172
            ++ V  +    A ++A +N   NG+ +  +         ++    S     F   + NP
Sbjct: 124 GWRFVATESDEFAAQVASNNVRNNGLGKLIEVIKVQEDRVIKDIVRSHSNEHFTFCMCNP 183

Query: 173 PYIESVI-------VDCLGLEVRDFD------PRISLDG 198
           P+ E          +D   +E + +D      PR +  G
Sbjct: 184 PFYEEDEAETKFVHLDGDAMENKCYDVTRRSAPRSATVG 222


>gi|322833734|ref|YP_004213761.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rahnella sp. Y9602]
 gi|321168935|gb|ADW74634.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rahnella sp. Y9602]
          Length = 410

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRIL 102
           K+ S H  LG   ++ F + ++  SS  + EP+   E   ++ +     +++ +    +L
Sbjct: 138 KNISAHYDLGNDFYQGFLDEKMLYSSAWYQEPQMTLEQAQEAKMRRLCEQLQLKAGDHLL 197

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           ++GTG GA+     +E    +     IS +    A       G+S+R   L  D + S++
Sbjct: 198 EIGTGWGAMAEFAAREY-GCQVTTTTISREQYRFACERIEKAGLSDRVTVLFED-YRSLQ 255

Query: 163 GLFDVIVS 170
           G FD +VS
Sbjct: 256 GQFDKLVS 263


>gi|262369740|ref|ZP_06063068.1| ribosomal protein L11 methyltransferase [Acinetobacter johnsonii
           SH046]
 gi|262315808|gb|EEY96847.1| ribosomal protein L11 methyltransferase [Acinetobacter johnsonii
           SH046]
          Length = 300

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-- 158
           ++D G G+G + +A L      K    DI  +A+   + NA  NGV+E       D F  
Sbjct: 163 VIDYGCGSGILGVAALLLGAK-KVYATDIDPQAILATEQNAALNGVAENLYVGLPDEFNL 221

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
              +   DV V+N   I +  +  L  E   +   +   +L G
Sbjct: 222 ELADQKADVFVAN---ILAGPLMMLAPEFATLVKSEGEFALAG 261


>gi|260432890|ref|ZP_05786861.1| cyclopropane-fatty-acyl-phospholipid synthase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416718|gb|EEX09977.1| cyclopropane-fatty-acyl-phospholipid synthase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 408

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 25/181 (13%)

Query: 59  DFYNVRLTLS---SDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAV 111
           DFY + L      S  +  +P   L  + A A     I ++      +R+LD+G G G +
Sbjct: 131 DFYQLMLDPDMQYSCAYFQQPRMTL--EQAQAAKKAHIARKLCLEPGMRVLDIGCGWGGL 188

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            L L ++    +  G+ +S      A +     G+++R D    D +  ++  FD IVS 
Sbjct: 189 ALTLARD-HGVRVTGLTLSQNQHRTATARVQQAGLTDRIDIQLMD-YRQMQDQFDRIVSV 246

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS-----RHLN----KDGL 222
                 ++      ++R +  RI+     DG++   +I            LN      G 
Sbjct: 247 -----GMLEHVGAPQLRTYFDRIAALLKPDGVALIHSIGRNGPPTGQSPWLNKYIFPGGY 301

Query: 223 C 223
            
Sbjct: 302 V 302


>gi|323697720|ref|ZP_08109632.1| methyltransferase [Desulfovibrio sp. ND132]
 gi|323457652|gb|EGB13517.1| methyltransferase [Desulfovibrio desulfuricans ND132]
          Length = 186

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 41/210 (19%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           RI+G +      LT     +  RP T  + +S  +    R       R++D+  G+G++ 
Sbjct: 2   RIVGGQYKGRRILTCEGPGY--RPATMKVRESVFSMLAARGVDFGRARVIDMFAGSGSLA 59

Query: 113 LALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV----EGLFD 166
           L  L   +P      V+ S KA  + + N     V    F  +  D FS +    E  FD
Sbjct: 60  LECLSRGAPMA--WFVEKSPKAAALIRRNLADLKVDKGHFRVVCKDLFSVLSKGPERPFD 117

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           ++  +PPY   ++V  L           +L+ G                 +   GL   E
Sbjct: 118 LVFIDPPYGHDLLVPALEK---------ALENG----------------WIAPGGLVLAE 152

Query: 227 I------GYNQKVDVVRIFESRKLFLVNAF 250
           +        +  V  + +   R+       
Sbjct: 153 VERSVTAPEDGPVGAMELLTDREYGQTRIL 182


>gi|46907415|ref|YP_013804.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47091996|ref|ZP_00229790.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 4b H7858]
 gi|226223796|ref|YP_002757903.1| precorrin decarboxylase [Listeria monocytogenes Clip81459]
 gi|254823550|ref|ZP_05228551.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J1-194]
 gi|254932926|ref|ZP_05266285.1| precorrin-8W decarboxylase [Listeria monocytogenes HPB2262]
 gi|255520282|ref|ZP_05387519.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           FSL J1-175]
 gi|46880683|gb|AAT03981.1| precorrin-8W decarboxylase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47019712|gb|EAL10451.1| precorrin-8W decarboxylase [Listeria monocytogenes str. 4b H7858]
 gi|225876258|emb|CAS04967.1| Putative precorrin decarboxylase [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|293584481|gb|EFF96513.1| precorrin-8W decarboxylase [Listeria monocytogenes HPB2262]
 gi|293592771|gb|EFG00532.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL J1-194]
 gi|328466594|gb|EGF37729.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           1816]
 gi|328475218|gb|EGF45999.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           220]
          Length = 189

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 34/129 (26%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    +++    
Sbjct: 34  KLLDVGAGTGSVGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGL-ENVTVIEAYAPI 92

Query: 160 SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRH 216
            +     FD I                             GG  G L+    I D    H
Sbjct: 93  ELPEKETFDAI---------------------------FIGGSGGNLTD---IIDWSLAH 122

Query: 217 LNKDGLCSV 225
           LN  G   +
Sbjct: 123 LNPGGGLVL 131


>gi|323484799|ref|ZP_08090156.1| hypothetical protein HMPREF9474_01907 [Clostridium symbiosum
           WAL-14163]
 gi|323401905|gb|EGA94246.1| hypothetical protein HMPREF9474_01907 [Clostridium symbiosum
           WAL-14163]
          Length = 186

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 55/135 (40%), Gaps = 23/135 (17%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL +G+GA+ +  L        V V+ + +A +  + N     + ++   +  D  +++
Sbjct: 46  LDLFSGSGAIGIEALSRGAEM-AVMVEHNPRAAQCIRENLKITHLEDKATVMNCDVITAL 104

Query: 162 EGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           + L      FD+I  +PPY        L   V ++    +L    D L     I    SR
Sbjct: 105 KRLEERQLVFDIIFMDPPY-----NQLLEKAVLEYLVHSALT-HADTL-----IIAEASR 153

Query: 216 -----HLNKDGLCSV 225
                +L++ G   V
Sbjct: 154 ETGMDYLSELGFELV 168


>gi|325102971|ref|YP_004272625.1| methyltransferase [Pedobacter saltans DSM 12145]
 gi|324971819|gb|ADY50803.1| methyltransferase [Pedobacter saltans DSM 12145]
          Length = 184

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 30/157 (19%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
           P   T  +   AL   +      + + +LDL +GTG + L     +   K   VD++   
Sbjct: 20  PVRPTTDMAKEALFNIIQNKVDIEGLNVLDLFSGTGNISLEFASRNA-AKITSVDLNYGC 78

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           +   K N        +    + + F  +      +D I ++PPY     +  +       
Sbjct: 79  VNYLK-NTAKECNLNQIKVTKGNVFKFLSTETAQYDFIFADPPY----DISKIP------ 127

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                           R + +     L ++G+  VE 
Sbjct: 128 -------------DIARLVFE--RNLLTENGILVVEH 149


>gi|284051466|ref|ZP_06381676.1| methyltransferase type 11 [Arthrospira platensis str. Paraca]
          Length = 442

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-R 149
            ++ K +   ILD G G+G   LAL   +P  K VG+DIS  ++E ++     +G+    
Sbjct: 52  QQVIKTEGKVILDAGCGSGYKALALALANPGAKIVGIDISENSVEASRDRLKYHGIENAE 111

Query: 150 FDTLQSDWFSSVEGLFDVI 168
           F  +  +   S+   FD I
Sbjct: 112 FHAMYIEELPSLGWEFDYI 130


>gi|225873910|ref|YP_002755369.1| hypothetical protein ACP_2325 [Acidobacterium capsulatum ATCC
           51196]
 gi|225792716|gb|ACO32806.1| conserved hypothetical protein [Acidobacterium capsulatum ATCC
           51196]
          Length = 452

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 28/132 (21%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---VSERFDTLQSDWF 158
           LD+ T  G   L L +  P  +  GVDIS  ALE+A+ N   N     +   D ++++ F
Sbjct: 280 LDICTYQGGFALHLAQVCP--RVTGVDISRAALEVAELNLAANYSALAASEVDWIEANAF 337

Query: 159 SSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         +D IV +PP                   + +L+G + G   Y+ +   
Sbjct: 338 DLLRDWSDAGNAYDTIVLDPPAFAKS--------------KRALEGALRG---YKELNLR 380

Query: 213 VSRHLNKDGLCS 224
             + L   G+  
Sbjct: 381 ALKMLRPGGVLV 392


>gi|166712780|ref|ZP_02243987.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas oryzae
           pv. oryzicola BLS256]
          Length = 431

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L     +   +     IS +  ++A       G
Sbjct: 188 LERICQKLRLGPQHHVVEIGTGWGGFALH-AARTHGCRVTTTTISREQFDLATQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLRD-YRDLEGRFDRVVS 270


>gi|148359499|ref|YP_001250706.1| methoxymalonyl CoA synthase [Legionella pneumophila str. Corby]
 gi|148281272|gb|ABQ55360.1| methoxymalonyl CoA synthase [Legionella pneumophila str. Corby]
          Length = 630

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             ILD+G G G +  AL +  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSILDVGGGDGTIACALAQAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWF--SSVEGLFDVIV 169
            +R      D+         FD+I+
Sbjct: 506 QKRISVFAGDFINDEQFPAGFDLIL 530


>gi|302385306|ref|YP_003821128.1| ribosomal protein L11 methyltransferase [Clostridium
           saccharolyticum WM1]
 gi|302195934|gb|ADL03505.1| ribosomal protein L11 methyltransferase [Clostridium
           saccharolyticum WM1]
          Length = 318

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 34/166 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPE-------TELLVD--------------SALAFSLPR 92
           I  W+ ++    T+     +P  E        +LL++              + L     +
Sbjct: 109 INNWKQYFK-PFTVDDILIKPTWEQIPEKDKDKLLIEIDPGTAFGTGQHETTQLCIRQLQ 167

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFD 151
                   +LD+GTG+G + +  LK     +  G D+   A+   + N   N +S ++F 
Sbjct: 168 KYVTPETTLLDVGTGSGILGITALKLGAK-EVFGTDLDENAIAAVRENMKANHISGDKFQ 226

Query: 152 TLQSDWFSSVE-------GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            LQ +               +DV+V+N   I + I+  L  E+   
Sbjct: 227 VLQGNIIDDKAVQEAAGFEKYDVVVAN---ILADIILLLQKEISVH 269


>gi|320010374|gb|ADW05224.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           flavogriseus ATCC 33331]
          Length = 434

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 32/199 (16%)

Query: 32  DRQRFFLTNAIVRSLKHESI--HRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSA 85
           +  R        R    E+I  H  +G  DFY       +  S   ++     E      
Sbjct: 127 EEVRRRTGPLHTRRRDKEAISHHYDVGN-DFYAMVLGPSMVYSCAYWQEGSTLEEAQRDK 185

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++   +  R+LD+G G G++ +   +E    +  GV +S +    A+      G
Sbjct: 186 LDLVCRKLALEEGDRLLDVGCGWGSMAIHAAREY-GARVTGVTLSTEQAAFARKRIAEEG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 245 LTDRIEIRVQDYRDVRDGPYDAISS-------IGMAEHVGSVR----------------- 280

Query: 206 YRTIADGVSRHLNKDGLCS 224
           +R  AD +   L   G   
Sbjct: 281 FREYADDLFALLRPGGRLL 299


>gi|116249239|ref|YP_765080.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115253889|emb|CAK12284.1| putative cyclopropane-fatty-acyl-phospholipid synthase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 342

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 53/145 (36%), Gaps = 30/145 (20%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC--KALEIAKSNAV 142
           ALA ++      D + IL+LG G G++ L L    P  +   V  S   +A  +A+  A 
Sbjct: 104 ALAETVNHAAIEDGMSILELGCGWGSLSLYLATHFPNSRVTSVSNSASQRAYILAR--AE 161

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           T G++            + +  +D +VS                V  F+   +       
Sbjct: 162 TLGLTNLSVITADMNHFATDQRYDRVVS----------------VEMFEHMSNW------ 199

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI 227
               R + + V R +  DG   + I
Sbjct: 200 ----RALLERVHRWIQPDGKLFLHI 220


>gi|77461111|ref|YP_350618.1| 16S rRNA m(2)G 1207 methyltransferase [Pseudomonas fluorescens
           Pf0-1]
 gi|123603206|sp|Q3K6H7|RLMG_PSEPF RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|77385114|gb|ABA76627.1| 23S rRNA m(2)G-1835 methyltransferase / 16S rRNA m(2)G 1207
           methyltransferase [Pseudomonas fluorescens Pf0-1]
          Length = 374

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 43/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + K      + DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPHLPKNLGAAGVADLGCGNGVLAIASALQNPDAHYTLVDESFMAVQSAAENWRAALGER 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D  +  E    DV++ NPP+ +  +V                     G     
Sbjct: 283 EAIVRAGDGLAGQEAQSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|328869392|gb|EGG17770.1| cyclopropane fatty acid synthase [Dictyostelium fasciculatum]
          Length = 466

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   + +   +    +L++G+G GA+ +         +   + +S + + +AK      G
Sbjct: 196 IRKLIDKANLKPHHHLLEIGSGWGALAIE-AVRRTGCRVTTISLSIEQVNLAKLRVKQAG 254

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + +R D +  D + +V G FD I+S           C  LE    +             H
Sbjct: 255 LEDRIDVVLID-YRNVAGQFDRIIS-----------CEMLEAVGHE-------------H 289

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y      + + L  DG+  +
Sbjct: 290 YDEYFASLEKLLKPDGIVVL 309


>gi|326387206|ref|ZP_08208816.1| putative methyltransferase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208387|gb|EGD59194.1| putative methyltransferase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 278

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 10/108 (9%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  I K     ILD+G G G + LAL    P  +  G+DI    +  A+  A  +G + 
Sbjct: 33  LLDAIAKEPGSHILDIGCGAGELSLALAAARPEARIAGIDIGPDLVAAARERA--SGTAV 90

Query: 149 RFDTLQSDWFSSVEGLFDVIVS--------NPPYIESVIVDCLGLEVR 188
            F    +  F    G  D++VS        +PP +          + R
Sbjct: 91  TFHCGDAGVFVDPAGAPDLLVSRHGVMFFADPPAVFRHFAAIAAPDAR 138


>gi|319778581|ref|YP_004129494.1| Ribosomal protein L11 methyltransferase [Taylorella equigenitalis
           MCE9]
 gi|317108605|gb|ADU91351.1| Ribosomal protein L11 methyltransferase [Taylorella equigenitalis
           MCE9]
          Length = 307

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LD G G+G + + + K+      VGVDI  +A+E AK N+  N      +  + +
Sbjct: 170 EDKSLLDYGCGSGILAI-IAKKYKANPVVGVDIDEQAVETAKLNSKQNQTE--IEFYEPN 226

Query: 157 WFSSVEGLFDVIVSN 171
            F   +G +D++++N
Sbjct: 227 EFP--DGQYDIVIAN 239


>gi|157804158|ref|YP_001492707.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|157785421|gb|ABV73922.1| seryl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 554

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 47/180 (26%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
              + +  RIL+LG   G   +      P    VGVD+S   ++ AK N    G+    +
Sbjct: 67  NTPEVENSRILELGCAAGGNLIPHAVLYPKAHFVGVDLSKVQIDEAKKNVKELGLK-NIE 125

Query: 152 TLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                     +  G FD I+ +       ++  +   VRD                   I
Sbjct: 126 FYHCSITDIDNSFGKFDYIICH------GVISWVPKTVRD------------------KI 161

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD--------YGG-NDRVL 260
            +  +++L+ +G+    I YN               +V   +D        +    DR++
Sbjct: 162 FEVCNKNLSPNGIAY--ISYNTLP---------GWNMVRTIRDMMMYHSSSFANVRDRIV 210


>gi|326382848|ref|ZP_08204538.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198438|gb|EGD55622.1| methyltransferase [Gordonia neofelifaecis NRRL B-59395]
          Length = 181

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 61/171 (35%), Gaps = 32/171 (18%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F   RL + +DT  P  +    V  A+   L         R+LDL  GTGA+ +     
Sbjct: 8   EFRGRRLAVPADTTRPTSDR---VREAVFSMLGSRMDLSEARVLDLYAGTGALGIE-AVS 63

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---SDWFSSVEGLFDVIVSNPPYI 175
                 V V+   +A  + + N    G + +   +      + ++  G FD+I  +PPY 
Sbjct: 64  RGAASAVLVEADRRAAGVLRDNVAVCGAAAQVRIVNRSVESFLAAPTGTFDLIFLDPPY- 122

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                D    EV                   R IA   +  L + G   VE
Sbjct: 123 -----DISTDEVN------------------RAIAGCAA-VLAEGGWILVE 149


>gi|268325441|emb|CBH39029.1| conserved hypothetical protein, Met-10+ like-protein family
           [uncultured archaeon]
 gi|268325748|emb|CBH39336.1| conserved hypothetical protein, Met-10+ like-protein family
           [uncultured archaeon]
          Length = 367

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           ++E+     I+D+  G G+  + + K +P      +DI+  A+     N   NGV    +
Sbjct: 184 QVERSKNELIIDMFAGVGSFSIQIAKRAPQSIVTAIDINPDAIRYLHENMEQNGVR-NIE 242

Query: 152 TLQSD---WFSSVEGLFDVIVSNPP 173
            ++ D    +   E   + I+ N P
Sbjct: 243 PIEGDVSGIYMKFENKANRIIMNLP 267


>gi|262279574|ref|ZP_06057359.1| ribosomal protein L11 methyltransferase [Acinetobacter
           calcoaceticus RUH2202]
 gi|262259925|gb|EEY78658.1| ribosomal protein L11 methyltransferase [Acinetobacter
           calcoaceticus RUH2202]
          Length = 298

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 71/197 (36%), Gaps = 41/197 (20%)

Query: 26  PDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRLTLSSDTFEP--RPET 78
           PD+ +   +   L + +              W D+Y       +  +  +  EP     T
Sbjct: 82  PDAPIRHEE---LEDQVWERA----------WMDYYEPIQIGEKFWIVPEWLEPPEADAT 128

Query: 79  ELLVDSALAF----------SLPRIEKRDVVR--ILDLGTGTGAVCLALLKESPFFKGVG 126
            + +D  LAF           L  + K DV    ++D G G+G + +A L      K   
Sbjct: 129 NIKLDPGLAFGTGNHASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLLGAK-KVYA 187

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS--VEGLFDVIVSNPPYIESVIVDCLG 184
            DI  +A+   K NA  N V +R      + F         DV+V+N   I +  +  L 
Sbjct: 188 TDIDPQAVLATKQNAELNRVLDRLYVGLPEEFDQEFKPQQADVLVAN---ILAGPLMALA 244

Query: 185 LE---VRDFDPRISLDG 198
            E   +   D   +L G
Sbjct: 245 PEFANLLKSDGEFALAG 261


>gi|254718208|ref|ZP_05180019.1| methyltransferase [Brucella sp. 83/13]
 gi|265983165|ref|ZP_06095900.1| methyltransferase small [Brucella sp. 83/13]
 gi|306839948|ref|ZP_07472742.1| methyltransferase small [Brucella sp. NF 2653]
 gi|264661757|gb|EEZ32018.1| methyltransferase small [Brucella sp. 83/13]
 gi|306404912|gb|EFM61197.1| methyltransferase small [Brucella sp. NF 2653]
          Length = 340

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A+ N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAARGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   V
Sbjct: 287 -------QSFIAAAASRLKPGGRLLV 305


>gi|221128435|ref|XP_002154469.1| PREDICTED: similar to Trimethylguanosine synthase homolog [Hydra
           magnipapillata]
          Length = 1198

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 19/140 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF-S 159
           I+D   G G   +           + +DI+   LE A+ NAV  GV  R   +  D+F  
Sbjct: 731 IIDAFCGVGGNAIQFAYTCE--HVIAIDINPTRLECARHNAVVYGVENRITFILGDFFLL 788

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL-- 217
           +     DV+  +PP+     +     +V D +  I    G    +    I + ++  L  
Sbjct: 789 APSLKADVVFLSPPWGGPNYIAE---DVFDIETMIKPVSGRVMFNVASKITENIALFLPK 845

Query: 218 -----------NKDGLCSVE 226
                         G   +E
Sbjct: 846 NVDIEQVASLVKPGGQVEIE 865


>gi|157150173|ref|YP_001450851.1| O-methyltransferase family protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157074967|gb|ABV09650.1| O-methyltransferase family protein [Streptococcus gordonii str.
           Challis substr. CH1]
          Length = 228

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++EG +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEGSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|94500186|ref|ZP_01306720.1| hypothetical protein RED65_13662 [Oceanobacter sp. RED65]
 gi|94427759|gb|EAT12735.1| hypothetical protein RED65_13662 [Oceanobacter sp. RED65]
          Length = 217

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            + L   E     R+LD G G+G V +A  K++     +  DI   AL   ++NA  N +
Sbjct: 70  KYILDHPEWVRGKRVLDFGAGSGIVAIA-AKKAGATSVIACDIDPDALISCQANAQLNNI 128

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
                    D F+  +  FD +++
Sbjct: 129 EL---ITSDDLFALDKHSFDCLIA 149


>gi|115378941|ref|ZP_01466075.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|310821512|ref|YP_003953870.1| methyltransferase type 11 domain-containing protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364058|gb|EAU63159.1| methyltransferase [Stigmatella aurantiaca DW4/3-1]
 gi|309394584|gb|ADO72043.1| Methyltransferase type 11 domain protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 247

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 29/173 (16%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +G   + +         +EP      +  + +   L  +      ++LDL  G G   + 
Sbjct: 1   MGQEWYRDAFNITDPIWYEP---LNEVAPAEVEQCLRLLALPPGSKVLDLCCGQGRHAVE 57

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           L      ++  G+DIS + L +A+  A         + +Q+D      G +  ++S   Y
Sbjct: 58  LALR--GYQVTGLDISSERLALARQRAT--QAQVNVEWVQADMRQMPPGGYAAVLSL--Y 111

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                                LD   D L     +       L   G   +E+
Sbjct: 112 TSFGY----------------LDTDADNLQVL-HVIREA---LAPGGSVLIEV 144


>gi|303234202|ref|ZP_07320848.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Finegoldia magna
           BVS033A4]
 gi|302494743|gb|EFL54503.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Finegoldia magna
           BVS033A4]
          Length = 442

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 62  NVRLTLSS-DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
            +   +S    F+P P      +     +L          + DL  GTG +     K+S 
Sbjct: 266 GLEFRISPFSFFQPNPAQA---EQIYNRALELAGDLSGKNVYDLYCGTGTIAQIFAKKSE 322

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG--LFDVIVSNPP 173
               +GV+I  +A+E A+ NA  NG++     +  D  + +E     DV+V +PP
Sbjct: 323 --SVIGVEIVAEAVEKAQENAKLNGLTNT-KFICDDCLNFMEKVEKKDVVVLDPP 374


>gi|237748712|ref|ZP_04579192.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
           formigenes OXCC13]
 gi|229380074|gb|EEO30165.1| cyclopropane-fatty-acyl-phospholipid synthase [Oxalobacter
           formigenes OXCC13]
          Length = 407

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I  R   R+LD+G G GA+ +   ++      VG+ +S    E+A+      G
Sbjct: 161 IDHILTKINVRPGDRLLDIGCGWGALAIRAAEKF-GANVVGITLSKNQYEMARQRVKEKG 219

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++ D    D +  V G FD I S
Sbjct: 220 LEDKIDIRIQD-YRDVTGKFDRITS 243


>gi|225570297|ref|ZP_03779322.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
           15053]
 gi|225160829|gb|EEG73448.1| hypothetical protein CLOHYLEM_06393 [Clostridium hylemonae DSM
           15053]
          Length = 251

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 29/145 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI--AKSN 140
           +  L   L  +     ++ILDLGTG+G +   + K+ P    +G+DI  KALE+   K+N
Sbjct: 31  EHHLKNILDFLPFSADMKILDLGTGSGYLSFPIAKKYPNISIIGLDIVEKALEVNRFKAN 90

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              N  +  F T     F   +  FD+++S                      R +L    
Sbjct: 91  -EENVQNISFITYDGVNFPFADNEFDMVIS----------------------RYALHHFP 127

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
           D     +     +SR +  DG   +
Sbjct: 128 D----IQKSISEISRVIKSDGFLFI 148


>gi|157364417|ref|YP_001471184.1| methyltransferase type 11 [Thermotoga lettingae TMO]
 gi|157315021|gb|ABV34120.1| Methyltransferase type 11 [Thermotoga lettingae TMO]
          Length = 257

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 30/129 (23%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS--D 156
           +RI DLG GTG   + L + +     +G+DIS   +E    NA   G+  R   +    D
Sbjct: 48  LRIADLGCGTGGQTMVLAQNTKG-TIIGLDISPDFIEKLNKNAEKLGLQNRVKGIVGSMD 106

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                +  FD+I S                    +  I++ G   GL+++R         
Sbjct: 107 NLPFQKEEFDIIWS--------------------EGAIAIIGFEKGLNYWR-------DF 139

Query: 217 LNKDGLCSV 225
           L KDG  ++
Sbjct: 140 LKKDGYIAI 148


>gi|75753628|gb|ABA26930.1| microcystin synthetase A [Microcystis sp. AICB 702]
          Length = 405

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 3   SQTLIAYVVGQSQEGELLAISEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 62

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 63  SYTGEP-------IPAAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 108

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 109 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESEXFDTIILN--- 164

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 165 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 197

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 198 VRNLQLMEAFHADVELYK 215


>gi|332297731|ref|YP_004439653.1| protein of unknown function Met10 [Treponema brennaborense DSM
           12168]
 gi|332180834|gb|AEE16522.1| protein of unknown function Met10 [Treponema brennaborense DSM
           12168]
          Length = 429

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 24/131 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD  T TGA  L         + V VDIS +A+ + +SN   N        + +D F 
Sbjct: 257 RVLDTFTHTGAFGLN-AVAGGASEVVSVDISAEAVSLVESNIERNKAGHVMKAVCADVFD 315

Query: 160 SVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++        FD+I+ +PP                        GG      Y+ I    
Sbjct: 316 LLKQYESEGRQFDLIILDPPAFAKSAAKIEKA-----------YGG------YKEINLRA 358

Query: 214 SRHLNKDGLCS 224
            + L   G+  
Sbjct: 359 MKLLTPGGILV 369


>gi|331011381|gb|EGH91437.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 374

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERVVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    +V++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLEVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|322653918|gb|EFY50242.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
          Length = 192

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +   L +   N  
Sbjct: 17  EAVRALALSKLELHRASHLIDVGAGTGSVSIEAALQFPSLQVTAIERNPAVLRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   D L  +   ++ G  D +                             GG  G
Sbjct: 77  RFACG-NIDILPGEAPMTITGKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H   + D    HL+  G   +
Sbjct: 109 --HLTALIDWAMGHLHPGGRLVM 129


>gi|309811817|ref|ZP_07705591.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Dermacoccus sp. Ellin185]
 gi|308434238|gb|EFP58096.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Dermacoccus sp. Ellin185]
          Length = 453

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
             A +L R+       + DLG G+GAV +     +P  + V V+      E A+ NA   
Sbjct: 262 VRAAALARLRPTRGALLWDLGAGSGAVGIEWALAAPDARTVAVERDAVRAERARENARAL 321

Query: 145 GVSERFDTLQSDWFS-SVEG--LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           GV  R D +++     +V G    D     P             + R   P     GG  
Sbjct: 322 GVDHRVDVVEASVHDVAVHGAQHRDGTACGP---CRDGAARATSDARHSAPDAVFFGG-- 376

Query: 202 GLSHYRTIADGVSRHLNKDGLCS 224
           GLS      D     L   G   
Sbjct: 377 GLSAEAV--DAALAALRPGGRLV 397


>gi|253989086|ref|YP_003040442.1| cobalt-precorrin-6Y C(15)-methyltransferase [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780536|emb|CAQ83698.1| precorrin-8w decarboxylase [Photorhabdus asymbiotica]
          Length = 189

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A +L R+E  +  +++D+GTGTG+V L      P      ++ +  AL +   N  
Sbjct: 17  EPVRALALERLELINAKQLIDVGTGTGSVALEAALRFPALTITAIERNPVALALIGENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G     + +  +   ++E + D +                             GG  G
Sbjct: 77  RLGC-HNVEIIAGEAPLALEVMADAV---------------------------FIGGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                 + D    H+   G   +
Sbjct: 109 --QLTALIDWALEHMYPGGRLVL 129


>gi|227509977|ref|ZP_03940026.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227190583|gb|EEI70650.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 456

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 68/189 (35%), Gaps = 27/189 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S ++F      +   +     ++ + +      ++D   G G + L+L K   
Sbjct: 273 MGLDFEISPNSFYQVNPIQT--EKLYKLAIQKAQLNKDDIVIDAYCGIGTISLSLAKVVK 330

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPPYI 175
             K  GV+I  +A+E AK NA  N +S     +     Q   +       DVIV +PP  
Sbjct: 331 --KVYGVEIVPEAIEDAKRNAHINKISNCKVVVAKAEEQLGKWQKAGLKPDVIVVDPP-- 386

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGY--NQK 232
              + + L   V +  P+             R I        L +D     E GY  NQ 
Sbjct: 387 RKGLDESLIESVAEMSPQ-------------RLIYVSCNPATLARDAKLFAEHGYQINQP 433

Query: 233 VDVVRIFES 241
           +  V  F  
Sbjct: 434 IQPVDQFPQ 442


>gi|157130292|ref|XP_001661874.1| prip interacting protein. pimt [Aedes aegypti]
 gi|108871934|gb|EAT36159.1| prip interacting protein. pimt [Aedes aegypti]
          Length = 526

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 9/154 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +         K + +DI  K +E+AK NA   GV++R + +  ++   
Sbjct: 371 IVDAFCGCGGNSIQFA--FTCQKVIAIDIDPKKIEMAKHNAAVYGVADRIEFITGNFLQL 428

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            +    DVI  +PP+        L  EV D +  +      + +   R ++  V+ +L +
Sbjct: 429 ADKLRADVIFLSPPW---GGPSYLKDEVYDLETSLIPVPATELMRKARMVSRNVAMYLPR 485

Query: 220 D---GLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +      ++  G N  V++ + F  RKL  + A+
Sbjct: 486 NSNTQQLTMLAGPNNAVEIEQNFLDRKLIALTAY 519


>gi|86606891|ref|YP_475654.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86555433|gb|ABD00391.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Synechococcus sp. JA-3-3Ab]
          Length = 282

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 37/164 (22%)

Query: 67  LSSDTFEP-------RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    +EP       R     L+D  + +     + +    ILDLG G G   L L +  
Sbjct: 28  MHHGYYEPGQTGKDRRQAQIDLIDRVIQWG-QIGDPKPPRHILDLGCGIGGSSLELARRF 86

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIES 177
              +  G+ +S    + A+  A   G+S R     +D       +  FD++         
Sbjct: 87  -GAEVTGITLSPVQAQRAEERAQAAGLSNRVRFWVADALDMPFADNTFDLVW-------- 137

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG 221
                            +L+ G   +   R       R L   G
Sbjct: 138 -----------------ALESGEH-MPDKRRFLAECWRVLQPGG 163


>gi|54297147|ref|YP_123516.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris]
 gi|53750932|emb|CAH12343.1| hypothetical protein lpp1192 [Legionella pneumophila str. Paris]
          Length = 390

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 21/129 (16%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL T TG   L   K     +   VD S +A+E AK+NAV N +    + +++D 
Sbjct: 221 GKRVLDLYTFTGGFALHAAKAGA-LQVTAVDSSAQAIEQAKNNAVLNHL-NTIEFIKADA 278

Query: 158 FSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              ++  G +DV++ +PP +            +++               YR +     +
Sbjct: 279 REYLKMAGEYDVVILDPPKLVPSQKHLQQ--AKNY---------------YRFLHREAFK 321

Query: 216 HLNKDGLCS 224
           ++    L  
Sbjct: 322 YMKPGSLLM 330


>gi|304414236|ref|ZP_07395604.1| methylase for 50S ribosomal subunit protein L11 [Candidatus
           Regiella insecticola LSR1]
 gi|304283450|gb|EFL91846.1| methylase for 50S ribosomal subunit protein L11 [Candidatus
           Regiella insecticola LSR1]
          Length = 330

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I+D G G+G + +A   +      +G+DI  +A++ ++ N   NGVSE  D  + + 
Sbjct: 194 GKTIIDFGCGSGILAIA-ALKLGAAHAIGIDIDAQAIQASRDNVQRNGVSENLDLYRPED 252

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 253 L-PTDIAADVVVAN 265


>gi|291405354|ref|XP_002718920.1| PREDICTED: methyltransferase 10 domain containing [Oryctolagus
           cuniculus]
          Length = 562

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPVERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEKNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGVTEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|227327928|ref|ZP_03831952.1| ribosomal protein L11 methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 295

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   I+D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +     
Sbjct: 158 EGKTIIDFGCGSGILAIA-ALKLGATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPADLSADVVVAN 230


>gi|192359393|ref|YP_001982434.1| putative ribosomal RNA small subunit methyltransferase C
           [Cellvibrio japonicus Ueda107]
 gi|190685558|gb|ACE83236.1| putative ribosomal RNA small subunit methyltransferase C
           [Cellvibrio japonicus Ueda107]
          Length = 357

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 68/183 (37%), Gaps = 36/183 (19%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF----KGVGVDISCKA 133
           +  L++     +L R E+      LDLG G G + L    + P      + +  D +  A
Sbjct: 197 SRFLLEHL--PALLRSEQLAPTTCLDLGCGYGYLTLN-ASKLPECASIQQWLLTDNNAAA 253

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           L  A++N   + ++ +   +  D  + +    D+I+ NPP+ +   V+            
Sbjct: 254 LLSAQANVDYHQLNAQV--VGDDCAAHLREPLDLILCNPPFHQGFNVE------------ 299

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
               G + G            R L + GL    +  NQ + + +  ++  +F     K  
Sbjct: 300 ----GELTG-----KFIATAQRLLKRGGLALFVV--NQFIPLEK--KAAGVF--RTIKLL 344

Query: 254 GGN 256
             N
Sbjct: 345 ADN 347


>gi|119501757|ref|XP_001267635.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181]
 gi|119415801|gb|EAW25738.1| O-methyltransferase, putative [Neosartorya fischeri NRRL 181]
          Length = 236

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 32/145 (22%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLAL--LKESPFFKGVGVDISCKALEIAKSNAVT 143
            A+ +   +     R+L+LGT TG   LAL         + V VD+S K L+IA+     
Sbjct: 56  CAWLMSFTQVLRPARVLELGTFTGVSALALHEATRQTGAEIVTVDLSEKYLKIAEDAFKR 115

Query: 144 NGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           +G ++R   ++ D       +EG FD+I     YI++   +        ++         
Sbjct: 116 HGATDRIRVIKGDCLKVLHELEGQFDLI-----YIDAEEDE--------YE--------- 153

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
              ++ R I D   + L+  G   V
Sbjct: 154 ---AYIRLILD--HKLLSPRGALIV 173


>gi|94987572|ref|YP_595505.1| ribosomal protein L11 methylase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731821|emb|CAJ55184.1| ribosomal protein L11 methylase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 289

 Score = 57.4 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 38/170 (22%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T +L   +++    +   +  +R  DLGTGTG + +A         G+G DI   A+  A
Sbjct: 135 TTVLCLESISHCAKKGYLQPGMRFFDLGTGTGILGIACSLL--GLTGIGADIDPIAISNA 192

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR--IS 195
             N   N V  +    ++   + +   F++IV+N                   +P   ++
Sbjct: 193 SENIALNKVESQMVITEAGVEAGLGESFNLIVAN----------------ILAEPLKCLA 236

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRK 243
           LD               +   L   G   +   + Y Q  DV   +    
Sbjct: 237 LD---------------LIELLAPSGNLILSGLLDY-QADDVEAAYSKLG 270


>gi|332311581|gb|EGJ24676.1| Precorrin-6B methylase 2 [Listeria monocytogenes str. Scott A]
          Length = 177

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 34/129 (26%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    +++    
Sbjct: 22  KLLDVGAGTGSVGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGL-ENVTVIEAYAPI 80

Query: 160 SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRH 216
            +     FD I                             GG  G L+    I D    H
Sbjct: 81  ELPEKETFDAI---------------------------FIGGSGGNLTD---IIDWSLAH 110

Query: 217 LNKDGLCSV 225
           LN  G   +
Sbjct: 111 LNPGGGLVL 119


>gi|225445168|ref|XP_002284097.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297738789|emb|CBI28034.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 1/100 (1%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +           + D G G G + +A          +G+DI  ++LEIA  NA   
Sbjct: 36  MLYTAENSFGDVSNKVVADFGCGCGTLGVAAALLGAE-HVIGLDIDPQSLEIASLNAEDL 94

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            +   F             + D +V NPP+        + 
Sbjct: 95  ELDMNFVHCDVKNLGWRGQIVDTVVMNPPFGTRKKGADMD 134


>gi|300718657|ref|YP_003743460.1| ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661]
 gi|299064493|emb|CAX61613.1| Ribosomal protein L11 methyltransferase [Erwinia billingiae Eb661]
          Length = 293

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALA----------FSLPRIEKRD--VVRILDLGT 106
           +  RL +       P PE   +++D  LA            L  ++  D     ++D G 
Sbjct: 108 FGQRLWICPSWRDVPDPEAVNVMLDPGLAFGTGTHPTTSMCLTWLDGLDLQGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVE 162
           G+G + +A   +      +G+DI  +A++ ++ NA  NGVS+R        Q D  S+  
Sbjct: 168 GSGILAIA-ALKLGAASAIGIDIDPQAIQASRDNAERNGVSDRLSLYLPHEQPDNLSA-- 224

Query: 163 GLFDVIVSN 171
              DV+V+N
Sbjct: 225 ---DVVVAN 230


>gi|289662858|ref|ZP_06484439.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 431

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L     +   +     IS +  ++A       G
Sbjct: 188 LERICQKLRLGPQHHVVEIGTGWGGFALH-AARAHGCRVTTTTISREQFDLATQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +++R   L  D +  +EG FD +VS
Sbjct: 247 LADRVTVLLRD-YRDLEGRFDRVVS 270


>gi|257482152|ref|ZP_05636193.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|330987558|gb|EGH85661.1| rRNA (guanine-N(2)-)-methyltransferase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 374

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R+ DLG G G + +A   ++P      VD S  A++ A  N          +  
Sbjct: 228 KNLGTARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRATLGERVVEVR 287

Query: 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            +D   + E    +V++ NPP+ +  +V                     G      +   
Sbjct: 288 AADGLDTQEPDSLEVVLCNPPFHQQQVV---------------------GDFLAWRMFLQ 326

Query: 213 VSRHLNKDGLCSV 225
               L   G   +
Sbjct: 327 ARAALVNGGALYI 339


>gi|237801457|ref|ZP_04589918.1| methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024316|gb|EGI04373.1| methyltransferase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 374

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 44/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP++ K     R+ DLG G G + +A   ++P      VD S  A++ A  N        
Sbjct: 223 LPQLPKNLGSSRVADLGCGNGVLAIASALDNPDAHYTLVDESYMAVQSAAENWRAQLGER 282

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D     E    DV++ NPP+ +  +V                     G     
Sbjct: 283 EAVIRAGDGLDGQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFLQAREALVTGGALYI 339


>gi|242006183|ref|XP_002423933.1| HpaII tiny fragments locus 9c protein, putative [Pediculus humanus
           corporis]
 gi|212507203|gb|EEB11195.1| HpaII tiny fragments locus 9c protein, putative [Pediculus humanus
           corporis]
          Length = 587

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 10/124 (8%)

Query: 30  LDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFS 89
           L  ++R      +   L  E    I            +S   F    +    V   L  S
Sbjct: 367 LMKKKRTQNDEVLYEHLFGE--TYIT--EKILGKTFRISPQAFF---QINTNVAEILYDS 419

Query: 90  LPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +  + +    V +LD+  GTG++ + L  +    + +G++IS +A+  AK+NA  NGV+ 
Sbjct: 420 IAELSELSKDVTLLDVCCGTGSIGICLSDKCG--EVLGLEISSEAIADAKANAELNGVNN 477

Query: 149 RFDT 152
               
Sbjct: 478 TQFF 481


>gi|167855143|ref|ZP_02477915.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           29755]
 gi|219870736|ref|YP_002475111.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           SH0165]
 gi|254789990|sp|B8F4B1|UBIG_HAEPS RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|167853778|gb|EDS25020.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           29755]
 gi|219690940|gb|ACL32163.1| 3-demethylubiquinone-9 3-methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 236

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 39/157 (24%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    LA+   +       ++LD+G G G +  ++          G+D++  AL +
Sbjct: 28  PIHLLNPLRLAYINDKTNGLFGKKVLDIGCGGGILSESMAGL--GAIVTGIDMAADALLV 85

Query: 137 AKSNAVTNGVSERF------DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           A+ +A +N ++  +      D L+    +  E  FD+I                +EV + 
Sbjct: 86  ARQHAESNHLNICYQQITVEDFLKQHCITDTE-KFDIITC--------------MEVLEH 130

Query: 191 --DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             +P                I       L +DGL  +
Sbjct: 131 VPNPHS--------------IIQSCKNLLKEDGLLFI 153


>gi|134045331|ref|YP_001096817.1| SAM-dependent methyltransferase [Methanococcus maripaludis C5]
 gi|132662956|gb|ABO34602.1| SAM-dependent methyltransferase [Methanococcus maripaludis C5]
          Length = 380

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 23/125 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++LD+ + TG    A+       +   VD+S KAL +A+ N   NGV   ++ + S
Sbjct: 206 KPGDKVLDICSYTG--GFAVHAGIKGGEVTAVDLSDKALAVAEENMELNGVK-NYNCIVS 262

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID----GLSH 205
           + F +++        FDV+V +PP       D           + +L+        GL  
Sbjct: 263 NAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDI----------KNALNAYNSMNYLGLKL 312

Query: 206 YRTIA 210
            + I 
Sbjct: 313 AKRIL 317


>gi|146311144|ref|YP_001176218.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter sp.
           638]
 gi|145318020|gb|ABP60167.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter sp.
           638]
          Length = 406

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 17/162 (10%)

Query: 13  RVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSS 69
           RV G    ++         D+ R  +             H  LG   +  F +  L  SS
Sbjct: 112 RVLGKPVERLRHWMRRNHRDQARENIAA-----------HYDLGNEFYAHFLDRELLYSS 160

Query: 70  DTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
             F    +   +   A +A    ++       +L++GTG GA+           +     
Sbjct: 161 ALFTADEQDLTIAQQAKMARLCEQLSLSASDHLLEIGTGWGAMAEYAALHY-GCRVTTTT 219

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +S +    AK      G+ +R   L  D +  + G +D +VS
Sbjct: 220 LSQEQFTWAKERIARAGLQDRVQVLLCD-YRDLTGEYDKLVS 260


>gi|222084320|ref|YP_002542849.1| rRNA (guanine-N2-)-methyltransferase [Agrobacterium radiobacter
           K84]
 gi|221721768|gb|ACM24924.1| rRNA (guanine-N2-)-methyltransferase [Agrobacterium radiobacter
           K84]
          Length = 338

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 47/146 (32%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
           +D+       R+         D G G G +   L  +SP   +    +    ALE A++N
Sbjct: 179 IDAGSELLASRLPTDFSGDAADFGAGWGYLSAELATKSPRIARIDLYEAHYDALEAARAN 238

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            + N           D     V+  +D+I+ NPP+           E    +P +     
Sbjct: 239 LLANCPKVAQRFFWHDLAGEPVKDKYDLIIMNPPF----------HEGHAAEPSLG---- 284

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  + +    S  L   G   +
Sbjct: 285 -------QAMIKTASSALRSGGRLML 303


>gi|213428046|ref|ZP_03360796.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 375

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L      P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCAA--PQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|159045573|ref|YP_001534367.1| ribosomal RNA small subunit methyltransferase B [Dinoroseobacter
           shibae DFL 12]
 gi|157913333|gb|ABV94766.1| ribosomal RNA small subunit methyltransferase B [Dinoroseobacter
           shibae DFL 12]
          Length = 443

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 51/185 (27%), Gaps = 27/185 (14%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+A +     +      R+LDL    G   L L       +   +DIS   +   + N  
Sbjct: 224 DAAASLPARALGPVVGARVLDLCAAPGGKTLQLAAA--GAQVTALDISDARVARLRENLA 281

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG-----LEVRDFDPRISLD 197
             G++     +      + E  FD I+ + P   +  +          ++ D     +L 
Sbjct: 282 RTGLAAEV-VIADGLTYAAETPFDAILLDAPCSATGTIRRHPDLPFLRDLSDLSDLTALQ 340

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEI-------GYNQKVDVVRIFESRKLFLVNAF 250
            G         + D     L   G             G +Q   V               
Sbjct: 341 AG---------LLDRAVGLLRPGGRLVFATCSLLPAEGEDQ---VAAALARHPGLAQVPL 388

Query: 251 KDYGG 255
            D  G
Sbjct: 389 SDLAG 393


>gi|163739723|ref|ZP_02147131.1| hypothetical protein RGBS107_17093 [Phaeobacter gallaeciensis
           BS107]
 gi|161386953|gb|EDQ11314.1| hypothetical protein RGBS107_17093 [Phaeobacter gallaeciensis
           BS107]
          Length = 404

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 24/154 (15%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L  D     +      +   ++LD+ +  G   LA +  +   +   VD S  AL++A
Sbjct: 210 TGLFYDQRDNHAFAAKLVKPGAKVLDVFSHVGGFGLA-MLAAGAAEATCVDGSAPALDLA 268

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +  A  +  ++RF   Q D F  +         FDV++ +PP                  
Sbjct: 269 REGAAASDFADRFAARQGDAFEVLTQLAEEGVQFDVVICDPPAFAPS------------- 315

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            + +L+    GL  Y  IA   +  +   G   +
Sbjct: 316 -KQALEA---GLRAYERIAKLAAPLVAPGGCLGL 345


>gi|83594284|ref|YP_428036.1| methyltransferase small [Rhodospirillum rubrum ATCC 11170]
 gi|83577198|gb|ABC23749.1| Methyltransferase small [Rhodospirillum rubrum ATCC 11170]
          Length = 260

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 19/173 (10%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +LD G GTGA  L L    P  +  G+++      +   +   N ++ R   +  D   
Sbjct: 54  HVLDAGAGTGAALLCLAARRPDLRVTGLELQALHAGLCHWSIELNALAGRARVMAGDLDR 113

Query: 160 SVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                    FD +++NPP+  +      G   R           ++G++           
Sbjct: 114 PPPELRATPFDAVMTNPPFTSAGTPPPDGGRAR---------AMMEGMA-LERWVARCLA 163

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY--GGN--DRVLLFCR 264
            L   G        ++  D++     R    +     +   G   +RV++  R
Sbjct: 164 LLRPKGRFFAVHRADRLDDLISALTGR-AGEITVLPLWSRAGRPAERVIVAAR 215


>gi|42524268|ref|NP_969648.1| putative O-methyltransferase [Bdellovibrio bacteriovorus HD100]
 gi|39576476|emb|CAE80641.1| putative O-methyltransferase [Bdellovibrio bacteriovorus HD100]
          Length = 213

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 69/207 (33%), Gaps = 35/207 (16%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF------F 122
            + +    ++  L      F    + K   +  LDL +G G V L  L            
Sbjct: 15  PEEYRFSHDSVFLARQVFEFLPEDLSK---MTALDLCSGCGIVGLDFLYHCKQEQRAYPA 71

Query: 123 KGVGVDISCKALEIAKSNAVT--------NGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           +   +++     +  + N           N V+  ++ L +  FSS    +D+I+SNPPY
Sbjct: 72  RFDFMEVQEVYRDHFEKNLTAFAQQKPAVNFVNLNYEALLTPEFSS---RYDLILSNPPY 128

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE------IG 228
             +        E ++   R       D    +  +  G+   LN  G   V        G
Sbjct: 129 FRTNQGKLSPSEFKN---RCRFFIDSD----FTNLIRGIDAALNPGGRAFVLLRDLQDHG 181

Query: 229 YNQKVDVVRIFESRKLFLVNAFKDYGG 255
           +N   +  +I   R    +    D  G
Sbjct: 182 WNPLEEARKILSGR--REIKKVADIRG 206


>gi|320527423|ref|ZP_08028604.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei
           F0204]
 gi|320132136|gb|EFW24685.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Solobacterium moorei
           F0204]
          Length = 377

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 10/124 (8%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I        +   +SS +F      +   +     +L  ++ +D   +LD   G G + 
Sbjct: 192 YITDR--IGGLEFRISSKSFYQVNPEQT--EVLYRTALSLVKIKDTDVVLDACCGIGTIS 247

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG---LFDVIV 169
           L   + +     +GV+I+ +A+  AK+NA  N +    +   +D    ++      DV++
Sbjct: 248 LLAAQSAK--HVIGVEINPQAIRDAKNNAKHNKLLNT-EFYAADATEFIQRMNIKTDVVI 304

Query: 170 SNPP 173
            +PP
Sbjct: 305 LDPP 308


>gi|294636993|ref|ZP_06715315.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Edwardsiella tarda
           ATCC 23685]
 gi|291089821|gb|EFE22382.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Edwardsiella tarda
           ATCC 23685]
          Length = 355

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
              F  V L +   +F        + ++  A +   +    V  + DL  G G   L   
Sbjct: 171 EESFNGVPLYIRPQSFF--QTNPAVAEALYAEARDWVRALGVTAMWDLFCGVGGFGLHCA 228

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIV-SNPP 173
             +P     G++IS +A+  A+ +A   G+    F  L S  F+   G    +V  NPP
Sbjct: 229 --TPEMALTGIEISAEAIACARRSAARLGLEKVSFAALDSTAFADEHGQAPQLVLVNPP 285


>gi|15599823|ref|NP_253317.1| hypothetical protein PA4627 [Pseudomonas aeruginosa PAO1]
 gi|81856976|sp|Q9HVG4|RSMC_PSEAE RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|9950880|gb|AAG08015.1|AE004877_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 332

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G G +   L +  P  +   +D+   A+E ++     NG+    + + +D
Sbjct: 191 PGGHLLDFGCGAGVLGAVLKRRYPASRLSLLDVDAFAVESSRLTLAANGLDG--EVIAAD 248

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                      IVSNPP+ + V  D    E                      +    + H
Sbjct: 249 GIDGAPRELAAIVSNPPFHQGVHTDYQASE---------------------RLLQRAAEH 287

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 288 LAPGGEL 294


>gi|325963546|ref|YP_004241452.1| methyltransferase, cyclopropane fatty acid synthase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323469633|gb|ADX73318.1| methyltransferase, cyclopropane fatty acid synthase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 438

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     ++  +  +R+LD+G G G+  L    +      VGV +S +   +A+  A 
Sbjct: 197 EAKLDLVCRKLGLKPGMRVLDVGCGWGSFALHAAGKY-GASVVGVTLSTEQAILARKRAA 255

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G++ER D    D+    +G FD I S
Sbjct: 256 DAGLTERVDIRVQDYRDVRDGPFDAISS 283


>gi|319784441|ref|YP_004143917.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317170329|gb|ADV13867.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 434

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 26/138 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +    +LD+G+G G + L L K        GV +S +   +A   A   G+ 
Sbjct: 165 HIAAKLRLKAGQTVLDIGSGWGGLGLYLAKAF-DVDVQGVTLSTEQHGVATDRAHAQGLE 223

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            R      D +  +   FD IVS                V  F+          G++HYR
Sbjct: 224 SRVHFELKD-YRELNERFDRIVS----------------VGMFE--------HVGVNHYR 258

Query: 208 TIADGVSRHLNKDGLCSV 225
           T  D  +  L  DG+  +
Sbjct: 259 TFFDKSATLLKPDGVMLL 276


>gi|212638138|ref|YP_002314658.1| methyltransferase [Anoxybacillus flavithermus WK1]
 gi|212559618|gb|ACJ32673.1| Methyltransferase [Anoxybacillus flavithermus WK1]
          Length = 456

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 17/130 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             I  +    +++  +S+ +F      +T++L + AL ++    E      ++D   G G
Sbjct: 266 EYIYDY--IGDIQFAISARSFYQVNPEQTKVLYEKALEYA----ELTGEETVIDAYCGIG 319

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163
            + L L K +   K  GV++  +A+E AK NA  NG++         + +   W+     
Sbjct: 320 TISLFLAKNAK--KVYGVEVVPEAIEDAKRNAELNGMTNVEFAVGEAEVVIPKWYEQ-GV 376

Query: 164 LFDVIVSNPP 173
             D IV +PP
Sbjct: 377 KADCIVVDPP 386


>gi|255932627|ref|XP_002557870.1| Pc12g10490 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582489|emb|CAP80676.1| Pc12g10490 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 349

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 75/197 (38%), Gaps = 44/197 (22%)

Query: 71  TFEPRPETELLVDS--------ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +EP  ++ L +D+         L+   P+ ++   + ++++GTG+G V      +S   
Sbjct: 15  IYEPSEDSYLFLDTLSSASESKWLSERFPKNQEASPL-VVEVGTGSGVVLAFTAAQSQQI 73

Query: 123 KG------VGVDISCKALEIAKSNA--------VTNGVSERFDTLQSDWFSSV-EGLFDV 167
            G      +G D++  A       A          +  S    +L +D  + +  G  DV
Sbjct: 74  FGRRDILTLGTDVNRNACIATWKTATTAIQTEQQPSPQSLHISSLTADLCAPLRPGSVDV 133

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPR-------------------ISLDGGIDGLSHYRT 208
           ++ NPPY+ +  +  L     + DP                    ++  GG DG+     
Sbjct: 134 LLFNPPYVPTEDLPRL-PSAAENDPAVSEAMSRSAKFDNDSYFLSLTYAGGADGMETTDR 192

Query: 209 IADGVSRHLNKDGLCSV 225
           + D +   L+  G+  V
Sbjct: 193 LLDAIPGVLSARGVAYV 209


>gi|332994865|gb|AEF04920.1| ribosomal RNA small subunit methyltransferase C [Alteromonas sp.
           SN2]
          Length = 359

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 23/143 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D      L +        +LD   G G +   L+   P  K    DIS  A+  +     
Sbjct: 206 DKGTKLLLEKHTSGMSGNVLDFACGAGVIASYLMLTYPHLKMQLSDISALAIYASAMTLA 265

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG S             +EG    IV+NPP+   +  D                     
Sbjct: 266 ANGQSATLHAANG--LYGIEGNVQHIVTNPPFHTGLKTD--------------------- 302

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
            +  +   +   + L+++G   +
Sbjct: 303 YTITKRFIEDARKMLSQNGTLQM 325


>gi|312219278|emb|CBX99222.1| similar to DUF890 domain-containing protein [Leptosphaeria
           maculans]
          Length = 448

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 76/239 (31%), Gaps = 44/239 (18%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKR--DVVRI--LDLGTGTGAV- 111
           + + L + +D   P    R      +   +  + P    +     ++  LD+GTG  A+ 
Sbjct: 55  FGLELDVPNDRLCPPIPNRWNYVSWIQGLIDSTSPSYSNKYEPERKVVGLDIGTGASAIY 114

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGL 164
            +  LK  P +     D+   +   A  N   N +  R   LQ+     +       +  
Sbjct: 115 TMLCLKSRPNWDMCATDVDKASFTSAARNLALNSLMTRTTLLQTTSSQPLIPLQALGKST 174

Query: 165 FDVIVSNPPYI--ESVIVDCLGLEVRDFDPRISLDG--------GIDGLSHYRTIADGVS 214
            D  + NPP+   ES + + L  E + + P     G        G D L     + +   
Sbjct: 175 LDFTICNPPFFTSESEMHNSLTGEGKSWKPNAVCTGAPIEMVCPGGD-LGFVTRLVEESL 233

Query: 215 RHLNKD--------GLCSVEIGYNQKVDVVRIFESRKL--FLVNAFKDYGGNDRVLLFC 263
             L +         G             V+ + + R +  + V          R ++  
Sbjct: 234 -VLREKVSWYSSMLGKL------ESAKAVITLLKQRGIANWAVGVIDTGASTKRWVVAW 285


>gi|319788722|ref|YP_004090037.1| methyltransferase [Ruminococcus albus 7]
 gi|315450589|gb|ADU24151.1| methyltransferase [Ruminococcus albus 7]
          Length = 182

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 39/178 (21%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G R     +L    DT + RP T+++ ++  +     +      ++LDL  G+G + +
Sbjct: 4   ITGSR--RGKKLKTL-DTLDTRPTTDMVKEAVFSAIQFDV---PGSQVLDLFAGSGQMGI 57

Query: 114 -ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIV 169
            AL +E+     V VD +  A+++ K N      +     L  D    ++   G FD+++
Sbjct: 58  EALSREASHC--VFVDNNPAAVQVIKENISDCKFNTESRVLNMDSLDYIKVAKGQFDIVL 115

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            +PPY                           G      +   +  HL+   +   E 
Sbjct: 116 LDPPY---------------------------GKGIIEKVLGSIDSHLSDRAIVVCEH 146


>gi|260779560|ref|ZP_05888450.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260604369|gb|EEX30673.1| ribosomal protein L11 methyltransferase [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 295

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D     ++D G 
Sbjct: 109 FGERLWICPSWRDVPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLSSKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF- 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+++ +          EGL  
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALIASKDNAERNGVADKLEVFLPQ--DQPEGLIA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|225568809|ref|ZP_03777834.1| hypothetical protein CLOHYLEM_04888 [Clostridium hylemonae DSM
           15053]
 gi|225162308|gb|EEG74927.1| hypothetical protein CLOHYLEM_04888 [Clostridium hylemonae DSM
           15053]
          Length = 460

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           I G   FY     ++  ++  +F    +T  L  +     +   I       I DL +GT
Sbjct: 268 IYGQDCFYEELLGMKFKITPFSFF---QTNSLGAEVLYEMARTYIGDTKDKVIFDLYSGT 324

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P   + VGV+I  +A+  AK NA  NG+ +       D       +  +
Sbjct: 325 GTIAQILA---PVAKRVVGVEIVEEAVAAAKENAKLNGL-DNCTFWSGDVLKVIDELGEV 380

Query: 165 FDVIVSNPP 173
            D+IV +PP
Sbjct: 381 PDLIVIDPP 389


>gi|241664206|ref|YP_002982566.1| ribosomal protein L11 methyltransferase [Ralstonia pickettii 12D]
 gi|240866233|gb|ACS63894.1| ribosomal protein L11 methyltransferase [Ralstonia pickettii 12D]
          Length = 298

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERTLDYGCGSGILAI-VAKKLGAGETVGVDIDPNAVEASRYNAERNH 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VEATFALPD----DAPEGTFDLVVAN 234


>gi|152990880|ref|YP_001356602.1| hypothetical protein NIS_1136 [Nitratiruptor sp. SB155-2]
 gi|151422741|dbj|BAF70245.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 387

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 70/212 (33%), Gaps = 32/212 (15%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPE 77
                I  P+S +           I           I    +   +R  +     +   +
Sbjct: 143 PKGAYITAPESAMRKEGEEPFEKMI-----GALPEHI--EIEENGIRFVVD---IKNSQK 192

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   +D     ++     +   R+LD  + +G   L    +        VDIS +AL +A
Sbjct: 193 TGFYLDQRANRAIVTKFMKQKERMLDCFSNSGGFGLYAASK-KGADVEIVDISSQALALA 251

Query: 138 KSNAVTNGVSERF-DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           KSN   NGV  +F +    D+   +   +  FD +V +PP                    
Sbjct: 252 KSNFRLNGVVGKFVEANVFDYLRELRKKKAKFDTVVLDPPSFAKS----------RHQKG 301

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +L G  D       I+    + L++ G  ++
Sbjct: 302 GALKGFKD-------ISVNAMKLLDEGGKLAL 326


>gi|213609453|ref|ZP_03369279.1| hypothetical protein SentesTyp_02523 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|289804442|ref|ZP_06535071.1| tRNA (adenine-N(6)-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 175

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 20/148 (13%)

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI-ESVI 179
              V++   A   A+ N   +    R      D   W       FD+I+SNPPY    V 
Sbjct: 2   VDAVELDAGAAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVE 61

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                 E   +    +LD        ++T+    +  + +DG   V +         +  
Sbjct: 62  CSTPQREQARY--TATLD--------HQTLLAIAADCITEDGFFCVVLPEQIGNAFTQQA 111

Query: 240 ESRKLFLVNAFKDYGGND-----RVLLF 262
            +    L     D   N+     RVLL 
Sbjct: 112 LNMGWHL-RLRTDVAENEARLPHRVLLA 138


>gi|55377305|ref|YP_135155.1| RNA methylase [Haloarcula marismortui ATCC 43049]
 gi|55230030|gb|AAV45449.1| putative RNA methylase [Haloarcula marismortui ATCC 43049]
          Length = 208

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 8/84 (9%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG-----VSERFDTLQS 155
           ++DLG GTG + L     SP  + VG+DI    L  A+ N    G        R D   +
Sbjct: 52  VVDLGCGTGMLSLGAALRSP-ARVVGLDIDPAPLSTARENERKVGSTTPVSWVRADATMA 110

Query: 156 DWFSSVEGLFDVIVSNPPYIESVI 179
                VE     +V NPP+     
Sbjct: 111 PLAPPVEET--TVVMNPPFGAQSD 132


>gi|251791075|ref|YP_003005796.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya zeae Ech1591]
 gi|247539696|gb|ACT08317.1| rRNA (guanine-N(2)-)-methyltransferase [Dickeya zeae Ech1591]
          Length = 385

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 49/168 (29%), Gaps = 29/168 (17%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +  R+   ++ F  R      +D    F +  + ++   +I+DLG G G + L  L  
Sbjct: 204 PLHGYRIHNHANVFA-RSG----LDIGARFFMRHLPQQLDGKIVDLGCGNGVIGLTALAL 258

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFD---TLQSDWFSSVEGLFDVIVSNPPYI 175
           +P       D S  A+  ++ N   N   +       +              ++ NPP+ 
Sbjct: 259 NPQAYVSFFDESYMAVASSRRNVEDNRPQDMARSSFVVNHALAGVGPDSQQAVLCNPPFH 318

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +   +                            +     R L   G  
Sbjct: 319 QQQAITD---------------------DIAWQMFLDARRCLTVGGEL 345


>gi|317178658|dbj|BAJ56446.1| cyclopropane fatty acid synthase [Helicobacter pylori F30]
          Length = 389

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGCLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|317028300|ref|XP_001390491.2| methyltransferase [Aspergillus niger CBS 513.88]
          Length = 330

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 39/140 (27%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--S 147
           L R   ++  R+LD+GTGTG   +    E P  + +G D+S             + +  +
Sbjct: 89  LNRAPIKNPARVLDIGTGTGIWAIDYADEHPEAEVIGNDLSP---------IQPSWIPPN 139

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            RF+    +   S    FD       YI    ++    +V +                  
Sbjct: 140 CRFEVDDFEQPWSYSKPFD-------YIHGRELEGCVRDVDN------------------ 174

Query: 208 TIADGVSRHLNKDGLCSVEI 227
            +      +L   G   +EI
Sbjct: 175 -LFRQALENLKPGGW--MEI 191


>gi|308048176|ref|YP_003911742.1| (50S ribosomal protein L11P)-lysine N-methyltransferase [Ferrimonas
           balearica DSM 9799]
 gi|307630366|gb|ADN74668.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Ferrimonas
           balearica DSM 9799]
          Length = 295

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 71/198 (35%), Gaps = 54/198 (27%)

Query: 61  YNVRLTLSSDTFE-PRPE-TELLVDSALAF----------SLPRIEKRDV--VRILDLGT 106
           +  RL +     E P P+   +++D  LAF           L  ++  ++    ++D G 
Sbjct: 108 FGRRLWICPSWREAPEPDAVNVMLDPGLAFGTGTHPTTALCLTWLDGLELGDKSVVDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A +K       VG+DI  +AL  +  NA  NGV E+                 
Sbjct: 168 GSGILAIAAIKLGAQS-VVGLDIDPQALTASADNAQRNGVEEKLTV-------------- 212

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV- 225
                  Y+     D L  +V   +       G       R +A  +S  +   G  ++ 
Sbjct: 213 -------YLPKNQPDDLQADVVVANIL----AGP-----LRELAPVISALVKPGGQLALS 256

Query: 226 ----EIGYNQKVDVVRIF 239
               E    Q  ++  I+
Sbjct: 257 GLLVE----QAEELRAIY 270


>gi|293606009|ref|ZP_06688374.1| cyclopropane-fatty-acyl-phospholipid synthase [Achromobacter
           piechaudii ATCC 43553]
 gi|292815464|gb|EFF74580.1| cyclopropane-fatty-acyl-phospholipid synthase [Achromobacter
           piechaudii ATCC 43553]
          Length = 706

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +   R++++GTG G   L   +           IS +   +A       G
Sbjct: 195 LDVICRKLDLQPGQRVVEIGTGWGGFALHAARHY-GCHVTTTTISREQHALATERIRRAG 253

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R D L  D +  + G +D +VS
Sbjct: 254 LQDRVDLLLQD-YRDLTGQYDKLVS 277


>gi|226355805|ref|YP_002785545.1| trans-aconitate 2-methyltransferase [Deinococcus deserti VCD115]
 gi|226317795|gb|ACO45791.1| putative Trans-aconitate 2-methyltransferase [Deinococcus deserti
           VCD115]
          Length = 261

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 63/180 (35%), Gaps = 38/180 (21%)

Query: 82  VDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           V SA A  L   I   D  +I+DLG GTG   L L +  P  + +G+D S + L      
Sbjct: 14  VRSAPAHHLQAMIPDLDYRQIVDLGCGTGEQTLTLARRFPQARVLGLDSSPEMLS----- 68

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                 +      Q D    + G +D+I SN        +  L     D +         
Sbjct: 69  RAPVQQAPNLSFAQGDI-RDLGGHYDLIYSN------AALQWLP----DHE--------- 108

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF-ESRKLFLVNAFKDYGGNDRV 259
                   +   +   L   G+ +V+I  N +    R+  E+ + F        GG  R 
Sbjct: 109 -------ALLPALWTLLQPGGVLAVQIPANHEHPSHRLLSETAQDFEAE----LGGYSRF 157


>gi|134058179|emb|CAK38372.1| unnamed protein product [Aspergillus niger]
          Length = 446

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 39/140 (27%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--S 147
           L R   ++  R+LD+GTGTG   +    E P  + +G D+S             + +  +
Sbjct: 270 LNRAPIKNPARVLDIGTGTGIWAIDYADEHPEAEVIGNDLSP---------IQPSWIPPN 320

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            RF+    +   S    FD       YI    ++    +V +                  
Sbjct: 321 CRFEVDDFEQPWSYSKPFD-------YIHGRELEGCVRDVDN------------------ 355

Query: 208 TIADGVSRHLNKDGLCSVEI 227
            +      +L   G   +EI
Sbjct: 356 -LFRQALENLKPGGW--MEI 372


>gi|238789815|ref|ZP_04633597.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii
           ATCC 33641]
 gi|238722174|gb|EEQ13832.1| Ribosomal protein L11 methyltransferase [Yersinia frederiksenii
           ATCC 33641]
          Length = 293

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 30/145 (20%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   S  
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLSK- 216

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
               +   DV+V+N           L   +R+  P IS             +      +L
Sbjct: 217 DQPADLSADVVVAN----------ILAGPLRELAPLIS-------------VLPVAGGYL 253

Query: 218 NKDGLCSVEIGYNQKVDVVRIFESR 242
              G+ +      Q   V + +E +
Sbjct: 254 GLSGVLA-----TQAAGVAQAYEDK 273


>gi|114564194|ref|YP_751708.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           frigidimarina NCIMB 400]
 gi|114335487|gb|ABI72869.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           frigidimarina NCIMB 400]
          Length = 412

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 66/181 (36%), Gaps = 36/181 (19%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDL 104
           H  LG   +++F +  +  SS  + P  ++ L    L    L     R+E      +L++
Sbjct: 141 HYDLGNDMYKEFLDPEMMYSSALY-PADDSSLNEAQL--HKLHTICERLELTPGQTLLEV 197

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   K           IS    + A+      G+ E+   L+ D +  + G 
Sbjct: 198 GTGWGALAIYAAKHY-GVHVTTTTISDAQFDYAQDRVKQEGLEEQITLLKQD-YRLLTGE 255

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D +VS        +++ +G E         L G            + +   L   G   
Sbjct: 256 YDRVVS------IEMIEAVGHEY--------LAG----------FFEKLQHLLKPSGRML 291

Query: 225 V 225
           +
Sbjct: 292 I 292


>gi|320036836|gb|EFW18774.1| methyltransferase [Coccidioides posadasii str. Silveira]
          Length = 343

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 39/132 (29%), Gaps = 37/132 (28%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +  RILD GTGTG   + +  E P  + +G D+S                      +Q
Sbjct: 103 PSNPQRILDFGTGTGIWAIDIADEFPSSEVIGTDLSP---------------------IQ 141

Query: 155 SDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG--IDGLSHYRTIAD 211
             W       + D + S  PY      D +              GG   +    Y     
Sbjct: 142 PTWIPPNCKFYVDDVESEWPYQPGEEFDFIHGRGM---------GGSIANWDQLYER--- 189

Query: 212 GVSRHLNKDGLC 223
              +HL   G  
Sbjct: 190 -AYQHLKPGGWI 200


>gi|323527388|ref|YP_004229541.1| 50S ribosomal protein L11 methyltransferase [Burkholderia sp.
           CCGE1001]
 gi|323384390|gb|ADX56481.1| ribosomal protein L11 methyltransferase [Burkholderia sp. CCGE1001]
          Length = 300

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 6/96 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L  ++          +LD G G+G + + L K+       GVDI  +A+E 
Sbjct: 150 PTTRLCMEWLEQAVQ-----PGQSVLDYGCGSGILAI-LAKKCGADPVFGVDIDPQAVES 203

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           A+ N+  N     +    +      E +   I+SNP
Sbjct: 204 ARHNSERNRAEVTYGLPDACPAGEFEIVVANILSNP 239


>gi|303318016|ref|XP_003069010.1| methyltransferase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108691|gb|EER26865.1| methyltransferase, putative [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 290

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 39/132 (29%), Gaps = 37/132 (28%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +  RILD GTGTG   + +  E P  + +G D+S                      +Q
Sbjct: 50  PSNPQRILDFGTGTGIWAIDIADEFPSSEVIGTDLSP---------------------IQ 88

Query: 155 SDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG--IDGLSHYRTIAD 211
             W       + D + S  PY      D +              GG   +    Y     
Sbjct: 89  PTWIPPNCKFYVDDVESEWPYQPGEEFDFIHGRGM---------GGSIANWDQLYER--- 136

Query: 212 GVSRHLNKDGLC 223
              +HL   G  
Sbjct: 137 -AYQHLKPGGWI 147


>gi|157114521|ref|XP_001652311.1| hypothetical protein AaeL_AAEL006882 [Aedes aegypti]
 gi|108877254|gb|EAT41479.1| conserved hypothetical protein [Aedes aegypti]
          Length = 256

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 6/115 (5%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           F L   +      +LD+G G GA  +A LK          DI   AL+    NA  N ++
Sbjct: 85  FILDNRQLFSGKSVLDVGCGCGASSIAALKSGAKL-VTANDIDAIALQATLLNAELNEIT 143

Query: 148 E-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           E R +  Q+D   +     DVI+    + ++ I D L   +     R++L  G D
Sbjct: 144 EQRLELDQTDHIGAPCDCHDVILLGDLFYDAEIADVLIPWLS----RLALVDGKD 194


>gi|119186115|ref|XP_001243664.1| hypothetical protein CIMG_03105 [Coccidioides immitis RS]
          Length = 384

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 39/132 (29%), Gaps = 37/132 (28%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             +  RILD GTGTG   + +  E P  + +G D+S                      +Q
Sbjct: 144 PSNPQRILDFGTGTGIWAIDIADEFPSSEVIGTDLSP---------------------IQ 182

Query: 155 SDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG--IDGLSHYRTIAD 211
             W       + D + S  PY      D +              GG   +    Y     
Sbjct: 183 PTWIPPNCKFYVDDVESEWPYQPGEEFDFIHGRGM---------GGSIANWDQLYER--- 230

Query: 212 GVSRHLNKDGLC 223
              +HL   G  
Sbjct: 231 -AYQHLKPGGWI 241


>gi|15828943|ref|NP_326303.1| DNA methylase [Mycoplasma pulmonis UAB CTIP]
 gi|14089886|emb|CAC13645.1| DNA METHYLASE [Mycoplasma pulmonis]
          Length = 267

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 22/179 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   +    +   L++G   GA+ + +       K   V+I  +  E+A+ N 
Sbjct: 42  VDTILLGNFIHLTT-SIKYALEIGANNGALSIFVASRKKDLKIDAVEIQKEPSELAQKNV 100

Query: 142 VTNGVSERFDTLQSDWFSSVE-------GLFDVIVSNPPY--IESVIVDCLGLE--VRDF 190
             N +  +   +  D+    +         +  I  NPPY  ++      +     +   
Sbjct: 101 ELNNLESQIKIINQDFNDFYKNHQKNTLKKYQSIFVNPPYYQLDKNKTKKIEKSKLIATH 160

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
           +  I+L            I  G    + + G  +  I   + VD+  +           
Sbjct: 161 EVSINL----------EQIIKGSRGIIEQKGYLNFVIPIERLVDLFYLLRKYNFEPKRV 209


>gi|283779408|ref|YP_003370163.1| cyclopropane-fatty-acyl-phospholipid synthase [Pirellula staleyi
           DSM 6068]
 gi|283437861|gb|ADB16303.1| Cyclopropane-fatty-acyl-phospholipid synthase [Pirellula staleyi
           DSM 6068]
          Length = 422

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 31/166 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                 +++ +    +L++G G G + +   +     +  G+ IS +  + A       G
Sbjct: 181 FQRICEKLDLQASDHLLEIGCGWGGLAIHAAQTC-GCRVTGITISQRQFDFATEKVREAG 239

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +S+R   +  D +  +EG FD +VS              +E    +              
Sbjct: 240 LSDRVTIVLRD-YRQMEGTFDKLVS-----------IEMIEAVGHE-------------F 274

Query: 206 YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                   S+ L  +GL  +     Q + +        L  V+  +
Sbjct: 275 LDQYFATCSKLLKPNGLALI-----QGITLADQLHQNYLKSVDFIQ 315


>gi|148241834|ref|YP_001226991.1| N6-adenine-specific methylase [Synechococcus sp. RCC307]
 gi|147850144|emb|CAK27638.1| N6-adenine-specific methylase [Synechococcus sp. RCC307]
          Length = 182

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 44/192 (22%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           S +  E RP T  LV  A+   L    +    R LDL +G+GA+    L +   +    V
Sbjct: 13  SPEGLEARPTTG-LVRQAVMNILAA--ELPGCRWLDLCSGSGAMACEALLQGALW-VQAV 68

Query: 128 DISCKALEIAKSNAVTNG------VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
           + + K    A+ N    G       S    T++     S    FD+I ++PPY       
Sbjct: 69  ERNPKIAAAARRNFQGLGERWQGTWSLEISTVERWLQRSCPEPFDLIYADPPYAA----- 123

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADG--VSRHLNKDGLCSVEIGYNQKVDVVRIF 239
                               GL  Y  I +       L +DG   +E G +         
Sbjct: 124 --------------------GL--YTPIVELISAGGWLKRDGQLLMECGRDAMP-----L 156

Query: 240 ESRKLFLVNAFK 251
             +    +   +
Sbjct: 157 PPKGWKQIKERR 168


>gi|52079174|ref|YP_077965.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC
           14580]
 gi|52784541|ref|YP_090370.1| YefA [Bacillus licheniformis ATCC 14580]
 gi|52002385|gb|AAU22327.1| putative RNA methyltransferase YefA [Bacillus licheniformis ATCC
           14580]
 gi|52347043|gb|AAU39677.1| YefA [Bacillus licheniformis ATCC 14580]
          Length = 462

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y     ++  +S+ +F      +T++L D AL ++    E      ++D   G
Sbjct: 266 IWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVLYDKALEYA----ELNGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG+          + +   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGIENAEFEVGEAEVVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GIAADTLVVDPP 390


>gi|15805449|ref|NP_294145.1| hypothetical protein DR_0422 [Deinococcus radiodurans R1]
 gi|21362984|sp|Q9RX93|TAM_DEIRA RecName: Full=Trans-aconitate 2-methyltransferase
 gi|6458104|gb|AAF10001.1|AE001902_1 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 258

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 32/149 (21%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I +R   +++DLG GTG     L +  P    +G  +   A  +AK+ A           
Sbjct: 26  IPERPYAQVVDLGCGTGEQTAQLAQRFPQATVLG--LDSSAAMLAKAGAQQLP---NLRF 80

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
            Q D    + G FD++ SN        +  L    R                    +   
Sbjct: 81  EQGDI-QELSGSFDLLYSN------AALQWLPDHPR--------------------LLAR 113

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
           +  HL   G+ +V++  N      R+  +
Sbjct: 114 LWEHLRPGGVLAVQVPANHDHASHRLLTA 142


>gi|293396875|ref|ZP_06641149.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Serratia odorifera DSM
           4582]
 gi|291420346|gb|EFE93601.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Serratia odorifera DSM
           4582]
          Length = 375

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 65/175 (37%), Gaps = 26/175 (14%)

Query: 20  HQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79
           H  I++ +  +   +R  L            +  I   + F+     +++D +       
Sbjct: 176 HMAILEGEREIPLTERQALEE----RFNQVPL-YIRP-QSFFQTNPQVAADLY------- 222

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
                  A +   ++   +  + DL  G G   L   +     +  G++I+ +A+  A+ 
Sbjct: 223 -------ATARDWVQALAIDSMWDLFCGVGGFGLHCARA--QTRLTGIEINAEAIACARQ 273

Query: 140 NAVTNGV-SERFDTLQSDWFSSVEGLFDVIV-SNPPY--IESVIVDCLGLEVRDF 190
           +A   G+    F  L S  F++ EG    +V  NPP   I   + D L     D+
Sbjct: 274 SAAALGLRQVNFQALDSTHFATAEGEVPQLVLVNPPRRGIGQALCDYLHRMAPDY 328


>gi|172056808|ref|YP_001813268.1| methyltransferase type 12 [Exiguobacterium sibiricum 255-15]
 gi|171989329|gb|ACB60251.1| Methyltransferase type 12 [Exiguobacterium sibiricum 255-15]
          Length = 242

 Score = 57.0 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 46/153 (30%), Gaps = 35/153 (22%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P PE    V   L    P        RI D+G GTG   L L       +  GVD+S +
Sbjct: 17  VPYPE---WVAWVLEQVEP------GKRIADIGCGTGTATLLLADHY---EVTGVDLSEE 64

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            LEIA+  A+       F          +    D I      I    ++ L  E      
Sbjct: 65  MLEIAQEKAMETNRHVDFWVQDMRELE-LPEPVDAIT-----ILCDSLNYLQTE------ 112

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +  +   D  +R L   G    
Sbjct: 113 -----------ADVKQTFDSAARLLTDGGKLLF 134


>gi|255037486|ref|YP_003088107.1| 50S ribosomal protein L11 methyltransferase [Dyadobacter fermentans
           DSM 18053]
 gi|254950242|gb|ACT94942.1| ribosomal L11 methyltransferase [Dyadobacter fermentans DSM 18053]
          Length = 312

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 38/171 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + L  +       + + I+D+G GTG + + L  +      +G DI   A+E  + N   
Sbjct: 160 TWLVMNEQLSLPHERLSIMDVGCGTGILAI-LAHKLGASHLLGFDIDEWAVENTRENFAM 218

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           N + +  +  Q        E +F  +++N      +  + L  E+  +            
Sbjct: 219 NALPDDSEVFQGTIQDVPQEKVFGGVLAN------INRNILLAEIPAY------------ 260

Query: 203 LSHYRTIADGVSRHLNKDGLCS----VEIGYNQKVDVVRIFESRKLFLVNA 249
                       +HL   G        E   +Q  D+ +      L  + +
Sbjct: 261 -----------VQHLAPGGWLVTSGFYET--DQA-DIEKCAAENGLKKLRS 297


>gi|119897152|ref|YP_932365.1| ribosomal protein L11 methyltransferase [Azoarcus sp. BH72]
 gi|119669565|emb|CAL93478.1| ribosomal protein L11 methyltransferase [Azoarcus sp. BH72]
          Length = 294

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A          +G+DI  KA+E A+ NA  NGV+ R      
Sbjct: 162 QPGTSVLDYGCGSGILGIA-AARLGAGDVLGIDIDDKAIEAARDNASRNGVTLRLQHSAV 220

Query: 156 DWFSSVEGLFDVIVSNP 172
               +   +   I++NP
Sbjct: 221 PVGDTFAVVVANILTNP 237


>gi|306818558|ref|ZP_07452281.1| RsmD family RNA methyltransferase [Mobiluncus mulieris ATCC 35239]
 gi|304648731|gb|EFM46033.1| RsmD family RNA methyltransferase [Mobiluncus mulieris ATCC 35239]
          Length = 187

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 60/162 (37%), Gaps = 34/162 (20%)

Query: 73  EPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            PR     T   V  A+   L         R+LD+  G+GA+ L           + VD 
Sbjct: 16  VPRSGTRPTSERVREAIFSRLDSQGVIAGARVLDIFAGSGALGLE-ALSRGATDAILVDS 74

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG---LFDVIVSNPPYIESVIVDCLG 184
           +  A+++ ++NA      ER   + +D   F++  G    FD++  +PPY          
Sbjct: 75  ARGAVQVLRANAAALSAGERVQVVGADAVRFAASLGANERFDLVFIDPPY---------- 124

Query: 185 LEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                     +LD G         +   V+ HL   G+  +E
Sbjct: 125 ----------ALDFG-----ILDQVLSSVATHLAPAGIIILE 151


>gi|302670355|ref|YP_003830315.1| 23S rRNA methyltransferase [Butyrivibrio proteoclasticus B316]
 gi|302394828|gb|ADL33733.1| 23S rRNA methyltransferase [Butyrivibrio proteoclasticus B316]
          Length = 470

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVR---ILDL 104
           + G   FY     ++  ++  +F        E+L  +  ++     +++ + +   I DL
Sbjct: 269 LYGQDFFYEHLLGLKFRITPFSFFQTNSLSAEVLYQTVRSYIKSLYDQKKISKDGIIYDL 328

Query: 105 GTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSS 160
            +GTG +   L    P   K +GV+I  +A+E AK NA  N + +  + +  D       
Sbjct: 329 YSGTGTIAQLLA---PVANKVIGVEIVEEAVEAAKENAKLNNL-DNCEFIAGDVLKVLDE 384

Query: 161 VEGLFDVIVSNPP 173
           +E   D+I+ +PP
Sbjct: 385 IEDKPDMIILDPP 397


>gi|291563951|emb|CBL42767.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [butyrate-producing bacterium SS3/4]
          Length = 318

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 84/278 (30%), Gaps = 81/278 (29%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI-------------HRILGWRDFYN 62
           G +     +D D    + +   +   +    +  +I               I  W+ ++ 
Sbjct: 59  GTARVSFYLDEDED-TEEKLKAVREGLEEIRQFVNIGTAKITESETDDKDWINNWKQYFK 117

Query: 63  VRLTLSSDTFEPRPE-------TELLVD--------------SALAFSLPRIEKRDVVRI 101
              T+     +P  E        +LL+               + L         +  V++
Sbjct: 118 -PFTVDHILIKPTWEEIPEEHKDKLLIQIDPGTAFGTGKHETTQLCIRQLEKYVKPGVKV 176

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSS 160
           LDLGTG+G + +A LK    +   G D+   A+     N   N +  E+F  +Q +    
Sbjct: 177 LDLGTGSGILGIAALKLGAEY-VFGTDLDENAITAVHENLAANDIPEEKFGVIQGNIIDD 235

Query: 161 VEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
                      +D++V+N                      ++             I   V
Sbjct: 236 KATQDAAGYECYDIVVAN---------------------ILA--------DIIIMIQKQV 266

Query: 214 SRHLNKDGLCSVEIGYN----QKVDVVRIFESRKLFLV 247
             HL K G+    I       ++  V    E  + F +
Sbjct: 267 PFHLKKGGIF---ISSGIIDMKEQAVREALEENEAFEI 301


>gi|270263298|ref|ZP_06191568.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13]
 gi|270042986|gb|EFA16080.1| ribosomal protein L11 methyltransferase [Serratia odorifera 4Rx13]
          Length = 293

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    I+D G 
Sbjct: 108 FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLQWLDGLDLTGKTIIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +          + L D
Sbjct: 168 GSGILAIAALKLGAE-RAIGIDIDPQAIQASRDNAQRNGVSERLELYLPK-DQPADLLAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|193634285|ref|XP_001944138.1| PREDICTED: methyltransferase-like protein 5-like [Acyrthosiphon
           pisum]
          Length = 191

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLG G+G   +  ALL    +    G DI   A+ ++  NA    V  + D +  D  
Sbjct: 55  VADLGCGSGVLCIGAALLGARYWA---GFDIDPSAISLSVENAADRDVLGQCDFILCDVK 111

Query: 159 SSVEGL----FDVIVSNPPY 174
              + +    FD ++ NPP+
Sbjct: 112 KIDKNMQLKSFDTVIMNPPF 131


>gi|168236826|ref|ZP_02661884.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734709|ref|YP_002113975.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|194710211|gb|ACF89432.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197290210|gb|EDY29567.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 375

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|107099708|ref|ZP_01363626.1| hypothetical protein PaerPA_01000726 [Pseudomonas aeruginosa PACS2]
          Length = 332

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G G +   L +  P  +   +D+   A+E ++     NG+    + + +D
Sbjct: 191 PGGHLLDFGCGAGVLGAVLKRRYPASRLSLLDVDAFAVESSRLTLAANGLDG--EVIAAD 248

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                      IVSNPP+ + V  D    E                      +    + H
Sbjct: 249 GIDGAPRELAAIVSNPPFHQGVHTDYQASE---------------------RLLQRAAEH 287

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 288 LAPGGEL 294


>gi|261838286|gb|ACX98052.1| type II adenosine specific DNA methyltransferase [Helicobacter
           pylori 51]
          Length = 386

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 57/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K +   +L+   G G    + LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KHNHGSVLEPSAGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|255324373|ref|ZP_05365491.1| type I restriction-modification system, M subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298560|gb|EET77859.1| type I restriction-modification system, M subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 374

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 26/172 (15%)

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-- 125
             + F P+  +E+L   A+        +  + R  D  TG+G++     K          
Sbjct: 52  GGEHFTPQEVSEILAAIAVN------RRSTIRRAYDPCTGSGSLLFRFAKVLGIDNITDG 105

Query: 126 --GVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG----LFDVIVSNPPYI--- 175
             G +I+     +A+ N   +GV  E+FD  + D   +        FD IVSNPPY    
Sbjct: 106 LYGQEINPTNHALARMNMFLHGVPFEKFDIKRGDTLENPLHLEVQPFDAIVSNPPYSQKW 165

Query: 176 ESVIVDCLGLEVRDFDPRISLD--GGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                  L  + R F P  +L      D L+    +      HL +DG+ ++
Sbjct: 166 PGKDDVTLINDPR-FAPAGALAPKSYSD-LAFTMHMLH----HLEEDGVAAI 211


>gi|168819955|ref|ZP_02831955.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205343011|gb|EDZ29775.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320085157|emb|CBY94944.1| putative enzyme [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 375

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--IASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|90020457|ref|YP_526284.1| 50S ribosomal protein L11 methyltransferase [Saccharophagus
           degradans 2-40]
 gi|123090758|sp|Q21MK7|PRMA_SACD2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|89950057|gb|ABD80072.1| LSU ribosomal protein L11P methyltransferase [Saccharophagus
           degradans 2-40]
          Length = 292

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 27/164 (16%)

Query: 25  DPDSVLDDRQRFFLTNAIVRS---LKHESIHRILGWRDFYNVRLTLSSDTFEPRPE--TE 79
                L       L +          +  I               +      P       
Sbjct: 76  HYGEELPHHHWHVLEDKDWEREWIKNYHPIQ--------CGPHFWICPSWLSPPDPNAIN 127

Query: 80  LLVDSALA----------FSLPRIEKRDV--VRILDLGTGTGAVCLALLKESPFFKGVGV 127
           LL+D  LA            L  + ++DV  + ++D G G+G + +A L        VGV
Sbjct: 128 LLLDPGLAFGTGTHPTTFMCLEWLAQQDVKNLELIDYGCGSGILGIAGLLMGANS-AVGV 186

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           DI  +AL   + NAV NG+++    +     +  E   D++++N
Sbjct: 187 DIDPQALLATQENAVRNGLAKEAFPVFMPQRAPKE-PVDMVLAN 229


>gi|113968745|ref|YP_732538.1| ribosomal protein L11 methyltransferase [Shewanella sp. MR-4]
 gi|114049111|ref|YP_739661.1| ribosomal protein L11 methyltransferase [Shewanella sp. MR-7]
 gi|117918857|ref|YP_868049.1| ribosomal protein L11 methyltransferase [Shewanella sp. ANA-3]
 gi|123131003|sp|Q0HQK1|PRMA_SHESR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|123325435|sp|Q0HN86|PRMA_SHESM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166223441|sp|A0KS74|PRMA_SHESA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|113883429|gb|ABI37481.1| LSU ribosomal protein L11P methyltransferase [Shewanella sp. MR-4]
 gi|113890553|gb|ABI44604.1| LSU ribosomal protein L11P methyltransferase [Shewanella sp. MR-7]
 gi|117611189|gb|ABK46643.1| LSU ribosomal protein L11P methyltransferase [Shewanella sp. ANA-3]
          Length = 293

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ++D G G+G + +A LK     K  G+DI  +A+E +K+NA  N V+++      +   
Sbjct: 161 EVIDFGCGSGILAVAALKLGAK-KVTGIDIDYQAIEASKANAERNDVADQLALYLPE-DQ 218

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             +   DV+V+N        +  L  E      +++L G
Sbjct: 219 PADLKADVLVANILAGPLRELAPLIAERVKSGGKLALSG 257


>gi|325291526|ref|YP_004277390.1| ribosomal RNA small subunit methyltransferase [Agrobacterium sp.
           H13-3]
 gi|325059379|gb|ADY63070.1| ribosomal RNA small subunit methyltransferase [Agrobacterium sp.
           H13-3]
          Length = 338

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 22/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
           VD        R+         D G G G + + L ++SP   +    +    ALE AK+N
Sbjct: 178 VDDGSELLASRLPTDFDGNAADFGAGWGYLSVMLAEKSPRTARIDLFEADWNALEFAKTN 237

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            + N           D      +  +D+I+ NPP+  +             +P +     
Sbjct: 238 LLENNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHAAGQAA---------EPALG---- 284

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +      +  L   G   +
Sbjct: 285 -------QAFIKTAAGALRNGGKLLM 303


>gi|296107542|ref|YP_003619243.1| methoxymalonyl CoA synthase [Legionella pneumophila 2300/99 Alcoy]
 gi|295649444|gb|ADG25291.1| methoxymalonyl CoA synthase [Legionella pneumophila 2300/99 Alcoy]
          Length = 630

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             ILD+G G G +  AL +  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSILDVGGGDGTIACALAQAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWF--SSVEGLFDVIV 169
            +R      D+         FD+I+
Sbjct: 506 QKRISVFSGDFINDEQFPAGFDLIL 530


>gi|212529036|ref|XP_002144675.1| RNA methylase family protein, putative [Penicillium marneffei ATCC
           18224]
 gi|210074073|gb|EEA28160.1| RNA methylase family protein, putative [Penicillium marneffei ATCC
           18224]
          Length = 242

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A  +     +D V ++D   G G   +A  K   + +   ++ +   L  AK NA   G
Sbjct: 63  IAEHISTSAPKDKVVLIDAFAGAGGNSIAFAKSGRWKRVYAIEKNPAVLTCAKHNAKIYG 122

Query: 146 VSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           V  +    + D F  ++      G + V+ ++PP+            ++  +P
Sbjct: 123 VESKITWFEGDCFEILKTHLKDLGPYSVVFASPPWGGPGYRSDEIFNLQTMEP 175


>gi|164661471|ref|XP_001731858.1| hypothetical protein MGL_1126 [Malassezia globosa CBS 7966]
 gi|159105759|gb|EDP44644.1| hypothetical protein MGL_1126 [Malassezia globosa CBS 7966]
          Length = 199

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 79/202 (39%), Gaps = 18/202 (8%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            R   +++ ++P  +T  L+D AL      ++  +    +++G+G+G V   + K     
Sbjct: 11  RRAEYTNEVYDPAEDTFALMD-ALENDAEALQALNASLCVEIGSGSGCVSAFVSKMLGS- 68

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
                  S    E+ +   +   V+   D L+      ++G  D+++ NPPY+ +   + 
Sbjct: 69  -------SAD--ELTRKTLLHPVVASVLDGLRPR----IDGAVDLLLFNPPYVVTTEEEE 115

Query: 183 LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFES 241
              + R      +  GG +G     T+     R L + G   V  I  N    +VR  +S
Sbjct: 116 ANEQARASLG-GAWAGGTNGTKILDTLIHD-DRVLRRGGRFYVVAIRQNDPHALVRAMQS 173

Query: 242 RKLFLVNAFKDYGGNDRVLLFC 263
           + L            +++ +  
Sbjct: 174 KGLDASIILHRRANREQIFILR 195


>gi|146283395|ref|YP_001173548.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri
           A1501]
 gi|205829580|sp|A4VP05|RLMF_PSEU5 RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|145571600|gb|ABP80706.1| predicted SAM-dependent methyltransferase [Pseudomonas stutzeri
           A1501]
          Length = 327

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 13/133 (9%)

Query: 58  RDFYNVR-LTLSSDTFEP----RPETEL-LVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           R FY ++   + +    P    R +    L D   A +   I +   VR+LD+GTG   +
Sbjct: 71  RQFYGIQHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGVIPRGAAVRVLDIGTGANCI 130

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSV---EGL 164
              +      ++  G DI   AL  A++    N + +  +  + D     F  +   +  
Sbjct: 131 YPLIGHREYGWRFTGSDIDATALASARTIVAANRLDKVIELRRQDTSTQLFKGILAADER 190

Query: 165 FDVIVSNPPYIES 177
           F++ + NPP+  S
Sbjct: 191 FELTLCNPPFHAS 203


>gi|52842153|ref|YP_095952.1| methoxymalonyl CoA synthase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629264|gb|AAU28005.1| methoxymalonyl CoA synthase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 630

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             ILD+G G G +  AL +  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSILDVGGGDGTIACALAQAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWF--SSVEGLFDVIV 169
            +R      D+         FD+I+
Sbjct: 506 QKRISVFSGDFINDEQFPAGFDLIL 530


>gi|54297862|ref|YP_124231.1| hypothetical protein lpp1917 [Legionella pneumophila str. Paris]
 gi|53751647|emb|CAH13069.1| hypothetical protein lpp1917 [Legionella pneumophila str. Paris]
          Length = 630

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             ILD+G G G +  AL +  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSILDVGGGDGTIACALAQAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWF--SSVEGLFDVIV 169
            +R      D+         FD+I+
Sbjct: 506 QKRISVFSGDFINDEQFPAGFDLIL 530


>gi|332188118|ref|ZP_08389848.1| ubiE/COQ5 methyltransferase family protein [Sphingomonas sp. S17]
 gi|332011832|gb|EGI53907.1| ubiE/COQ5 methyltransferase family protein [Sphingomonas sp. S17]
          Length = 228

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +  +    ++D+G GTG+  L L +  P  + +G+D   +AL+IA+  A        
Sbjct: 34  LAALAPKAGETVVDVGCGTGSFALMLKQAEPRTQVIGLDPDAEALDIARHKAAVRRAD-- 91

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            D  Q        G  D +VS      S+++  +   VR  +   +L          R I
Sbjct: 92  IDWRQGFARDVAPGTADAVVS------SLVLHQMP--VR--EKAATL----------RAI 131

Query: 210 ADGVSRHLNKDGLCSV 225
              +   L   G   +
Sbjct: 132 LRAMFAMLRPGGRLVI 147


>gi|319647052|ref|ZP_08001278.1| YefA protein [Bacillus sp. BT1B_CT2]
 gi|317390876|gb|EFV71677.1| YefA protein [Bacillus sp. BT1B_CT2]
          Length = 458

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y     ++  +S+ +F      +T++L D AL ++    E      ++D   G
Sbjct: 266 IWGEEYIYDTIGGIKFAISARSFYQVNPEQTKVLYDKALEYA----ELNGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG+          + +   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGIENAEFEVGEAEVVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GIAADTLVVDPP 390


>gi|284167455|ref|YP_003405733.1| methyltransferase type 12 [Haloterrigena turkmenica DSM 5511]
 gi|284017110|gb|ADB63060.1| Methyltransferase type 12 [Haloterrigena turkmenica DSM 5511]
          Length = 360

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +GW +        +   F P     LL D   A        +   +I D+G G GA  + 
Sbjct: 139 IGWHEHDEDVFHGTERFFGPSYGAFLL-DWIAALDGVDETLQAGGQIADVGCGHGAPTIR 197

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           + +  P    VG+D   +++ +A+  A T GV++R D 
Sbjct: 198 MAEAYPKSTVVGIDYHEESIAVARERAETAGVADRVDF 235


>gi|268326391|emb|CBH39979.1| conserved hypothetical membrane protein, methyltransferase family
           [uncultured archaeon]
          Length = 257

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 78/209 (37%), Gaps = 37/209 (17%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            LS   +        L  +     + ++      + LD+GTG+GA  + + K+    K  
Sbjct: 56  YLSCAYYLFAKNDNELQHNIHHAMIDKLSWNGEGKALDIGTGSGACAIKVAKKFRNSKVT 115

Query: 126 GVDISCKA----LEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVI 179
           G+D   KA    L++ ++NA T GV ER +  ++        +G FDV VSN  +     
Sbjct: 116 GIDYWGKAWNYSLKVCENNAATEGVGERTNFQKASAADLPFDDGEFDVAVSNFVF----- 170

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV------EIGYNQKV 233
                 EVRD   +             R +     R + K G  S       E  Y +  
Sbjct: 171 -----HEVRDAKDK-------------REVVQEALRVVKKGGAFSFQDLFLSEKIYGEIE 212

Query: 234 DVVRIFESRKLFLVNAFK--DYGGNDRVL 260
           D+++      +  V+     D     R+L
Sbjct: 213 DLLKTIRDWGIEEVHFTNTADLVNIPRLL 241


>gi|85707045|ref|ZP_01038134.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp. 217]
 gi|85668486|gb|EAQ23358.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp. 217]
          Length = 446

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 19/150 (12%)

Query: 36  FFLTNAIVRSLKHESI--------HRILGWRDFYNVRLTLSSDT---FEPRPETELLVDS 84
            +L   + R L H  I        H      + Y++ L         + P   TE L D 
Sbjct: 128 RWLDAFLSRRLHHNPISRSHANVAHHYDISTELYDLFLDADRQYSCAYFP-TGTETL-DE 185

Query: 85  ALAFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           A AF    I      R  + +LD+G+G G + + L ++    +  G+ +S + +  A+  
Sbjct: 186 AQAFKKKHIAAKLLMRPGLEVLDIGSGWGGLAMELAQQH-EARVTGLSLSAEQIAAARER 244

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           A   G+ +R    + D+     GL+D +VS
Sbjct: 245 AQQTGLFDRVAFERRDYREE-HGLYDRVVS 273


>gi|295702483|ref|YP_003595558.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium
           DSM 319]
 gi|294800142|gb|ADF37208.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium
           DSM 319]
          Length = 457

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             I  +    +V+  +S+ +F      +T++L D AL ++    E+     ++D   G G
Sbjct: 269 EYIYDY--IGDVKFAISAKSFYQVNPEQTKVLYDKALEYADLTGEE----TVIDAYCGIG 322

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163
            + L L +++   K  GV+I  +A+E AK NA  NG+          + +  +W+     
Sbjct: 323 TISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGIHNAEFEVGEAEVVIPNWYKQ-GI 379

Query: 164 LFDVIVSNPP 173
             DVIV +PP
Sbjct: 380 KADVIVVDPP 389


>gi|294497118|ref|YP_003560818.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM
           B1551]
 gi|294347055|gb|ADE67384.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Bacillus megaterium QM
           B1551]
          Length = 457

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             I  +    +V+  +S+ +F      +T++L D AL ++    E+     ++D   G G
Sbjct: 269 EYIYDY--IGDVKFAISAKSFYQVNPEQTKVLYDKALEYADLTGEE----TVIDAYCGIG 322

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163
            + L L +++   K  GV+I  +A+E AK NA  NG+          + +  +W+     
Sbjct: 323 TISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNGIHNAEFEVGEAEVVIPNWYKQ-GI 379

Query: 164 LFDVIVSNPP 173
             DVIV +PP
Sbjct: 380 KADVIVVDPP 389


>gi|291615312|ref|YP_003525469.1| ribosomal protein L11 methyltransferase [Sideroxydans
           lithotrophicus ES-1]
 gi|291585424|gb|ADE13082.1| ribosomal protein L11 methyltransferase [Sideroxydans
           lithotrophicus ES-1]
          Length = 296

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A +K       VGVD+  +A++ ++ NA  N VS  F   + 
Sbjct: 163 KGGETVLDYGCGSGILAIAAMKLGAGS-AVGVDVDAQAVKSSRDNAAANQVSADFFLPEG 221

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-----GIDGLSHYRTIA 210
                 + +   I++NP       +  L         RI L G       D +  Y    
Sbjct: 222 KVLDQHDVVVANILTNP----LRALAPLLASATRSGGRIVLSGILAEQADDVMRIYAQWF 277

Query: 211 DGVSRHLNKDGLCSV 225
           D     L +DG C +
Sbjct: 278 DLAPAVL-EDGWCCL 291


>gi|289825022|ref|ZP_06544385.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
          Length = 368

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|186477379|ref|YP_001858849.1| ribosomal protein L11 methyltransferase [Burkholderia phymatum
           STM815]
 gi|226710060|sp|B2JH19|PRMA_BURP8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|184193838|gb|ACC71803.1| ribosomal protein L11 methyltransferase [Burkholderia phymatum
           STM815]
          Length = 300

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 10/95 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L  S+ + +      +LD G G+G + + L K+       G+DI  +A+E 
Sbjct: 150 PTTRLCMEWLEQSVQKDQS-----VLDYGCGSGILAI-LAKKCGANPVFGIDIDPQAVES 203

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           A+ N+  N    R +           G FD++V+N
Sbjct: 204 ARHNSERN----RAEITYGLPADCPAGEFDIVVAN 234


>gi|134298567|ref|YP_001112063.1| type 11 methyltransferase [Desulfotomaculum reducens MI-1]
 gi|134051267|gb|ABO49238.1| Methyltransferase type 11 [Desulfotomaculum reducens MI-1]
          Length = 251

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +S L F     +   V R+LDLG G+G   L   K       VG+D   + + +A+  A 
Sbjct: 17  ESQLKFFRQTFDDLGVSRVLDLGCGSGNYPLEFAKW--GLTVVGLDYEQEMIRLAREKAR 74

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             GVS  F T        ++G FD I+ 
Sbjct: 75  KAGVSVDFMTGDMRNLEDIDGKFDAIIC 102


>gi|313107286|ref|ZP_07793481.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa 39016]
 gi|310879983|gb|EFQ38577.1| putative ribosomal RNA small subunit methyltransferase C
           [Pseudomonas aeruginosa 39016]
          Length = 332

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 23/127 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G G +   L +  P  +   +D+   A+E ++     NG+    + + +D
Sbjct: 191 PGGHLLDFGCGAGVLGAVLKRRYPASRLSLLDVDAFAVESSRLTLAANGLDG--EVIAAD 248

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                      IVSNPP+ + V  D    E                      +    + H
Sbjct: 249 GIDGAPRELAAIVSNPPFHQGVHTDYQASE---------------------RLLQRAAEH 287

Query: 217 LNKDGLC 223
           L   G  
Sbjct: 288 LAPGGEL 294


>gi|304396885|ref|ZP_07378765.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
 gi|304355681|gb|EFM20048.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. aB]
          Length = 372

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-- 148
             + +     I+DLG G G V L  L+++P  +   +D S  A+  +K N   N   +  
Sbjct: 219 QHLPENIEGEIVDLGCGNGVVGLVALEQNPQAEVHFLDESYMAVASSKLNVEVNRPDDLS 278

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   L ++  S         ++ NPP+ +          V D    ++            
Sbjct: 279 RCQFLVNNVLSGYPSDRLHAVLCNPPFHQ-------QHAVTDH---LAW----------- 317

Query: 208 TIADGVSRHLNKDGLC 223
            +     R L   G  
Sbjct: 318 QMFRDAKRCLQYGGEL 333


>gi|260427704|ref|ZP_05781683.1| ribosomal protein L11 methyltransferase [Citreicella sp. SE45]
 gi|260422196|gb|EEX15447.1| ribosomal protein L11 methyltransferase [Citreicella sp. SE45]
          Length = 291

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 35/153 (22%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G GT  + +   +  P    +  DI   A+E+A++N   N +  +   +++  F +
Sbjct: 153 VADIGCGTAVLAMGAARIWPDP-VIASDIDEVAVEVAEANVRANALEGKVTCVEAAGFDN 211

Query: 161 VE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            E      FD++ +N           L   + D  P ++                    H
Sbjct: 212 PELAARAPFDLVFAN----------ILKQPLIDLAPHMA-------------------SH 242

Query: 217 LNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVN 248
           L   G   +  I   Q  +VV ++    + LV+
Sbjct: 243 LGDGGYAILSGILTRQADEVVEVYLLNGINLVH 275


>gi|227523038|ref|ZP_03953087.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           hilgardii ATCC 8290]
 gi|227089856|gb|EEI25168.1| TrmA family tRNA (uracil-5-)-methyltransferase [Lactobacillus
           hilgardii ATCC 8290]
          Length = 456

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 68/189 (35%), Gaps = 27/189 (14%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             +   +S ++F      +   +     ++ + +      ++D   G G + L+L K   
Sbjct: 273 MGLDFEISPNSFYQVNPIQT--EKLYKLAIQKAQLNKDDIVIDAYCGIGTISLSLAKVVK 330

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPPYI 175
             K  GV+I  +A+E AK NA  N +S     +     Q   +       DVIV +PP  
Sbjct: 331 --KVYGVEIVPEAIEDAKRNAHINKISNCKFVVAKAEEQLGKWQKAGLKPDVIVVDPP-- 386

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGVSRHLNKDGLCSVEIGY--NQK 232
              + + L   V +             +S  R I        L +D     E GY  NQ 
Sbjct: 387 RKGLDESLIESVAE-------------MSLQRLIYVSCNPATLARDAKLFAEHGYQINQP 433

Query: 233 VDVVRIFES 241
           +  V  F  
Sbjct: 434 IQPVDQFPQ 442


>gi|224010878|ref|XP_002294396.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969891|gb|EED88230.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 548

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 49  ESIHRILG----WRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRIL 102
             +  + G              +S   F        E L    +              ++
Sbjct: 318 HPVQHVFGKNCIEEKLGKCTFQISPGAFFQTNTAGAEKLYSMVVDRVKEVTNNPKDTLLV 377

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           D+  GTG + L L+KE      VGVDI+  A+  A++NA  NG++  
Sbjct: 378 DVCCGTGTIGLTLMKEGVVGSLVGVDIAKPAILDARANAEKNGMTTN 424


>gi|206895554|ref|YP_002247219.1| ribosomal protein L11 methyltransferase [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206738171|gb|ACI17249.1| ribosomal protein L11 methyltransferase [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 251

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 44/236 (18%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNA----------IVRSLKHESIH--RI 54
             +    G S  ++ +  D+ L +   QR+ +             +    K  S+   RI
Sbjct: 23  YLVQNANGTSIVELYLPEDAKLPEDISQRWPIEELGYDNQQWLDDLRGKFKGVSVAGTRI 82

Query: 55  LG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           L  W +     L +          T     + LA  L  I       +LD+GTG+G + +
Sbjct: 83  LPPWEEHREDDLLIYPGM---AFGTGEHASTQLALVLLSILPLQGKSLLDVGTGSGILAI 139

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
              K+    K  GVDI   ++E A  NA  N V   F+   +     ++G +DV+ +N  
Sbjct: 140 Y-AKKRGCSKVTGVDIDPISVENALDNAKLNDVDISFEVADAY---ELKGEYDVVSANLV 195

Query: 174 Y-IESVIVDCLGLEVRDF-------------------DPRISLDGGIDGLSH-YRT 208
             +   + + L    R+F                   +P +++  G D ++  YR 
Sbjct: 196 TDLLLGLREVLQPLAREFLVLSGIPFEDYNRIVESFGEPYLAVF-GEDWIAFLYRR 250


>gi|187478940|ref|YP_786964.1| bifunctional biotin synthesis protein BioCD [Bordetella avium 197N]
 gi|115423526|emb|CAJ50061.1| bifunctional biotin synthesis protein BioCD [Bordetella avium 197N]
          Length = 465

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 29/162 (17%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           R   ++D +E     +     ALA  +  +      RIL++G GTG +  AL +      
Sbjct: 13  RFDAAADRYEHHAWAQRHAAEALAERIAALALPAKPRILEIGCGTGLLTRALARRLGPAD 72

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCL 183
               DI+   L  A++N     +  R+  +  +  + ++G +D+I S             
Sbjct: 73  WTLSDIAPDMLRQARAN---LNLPARYLRMDGEHPAGLDGQYDLICS------------- 116

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            L V+ F    +      GL         ++R L   G  ++
Sbjct: 117 SLAVQWFGDLNA------GL-------ARLTRWLRPGGHLAI 145


>gi|84489290|ref|YP_447522.1| putative type I restriction-modification system, methyltransferase
           subunit [Methanosphaera stadtmanae DSM 3091]
 gi|84372609|gb|ABC56879.1| putative type I restriction-modification system, methyltransferase
           subunit [Methanosphaera stadtmanae DSM 3091]
          Length = 508

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 17/160 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  + +L           + K  +  + D   G+G++ L + KE+   +  G +++ 
Sbjct: 194 YTPQEVSTILARIV------TLNKTRLKSVYDPTCGSGSLLLRVSKEADVSEFYGQELNQ 247

Query: 132 KALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG---LFDVIVSNPPYIE--SVIVDCLGL 185
               +A+ N + +GV    F+  Q D   +       FD +V+NPP+    S     +  
Sbjct: 248 TTYNLARMNMILHGVKYNHFNIKQGDSLENDRHEELKFDAVVANPPFSAKWSSDKSFIND 307

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           E      +++     D  +  + +      HLN+ G  +V
Sbjct: 308 ERFSGYGKLAPKSKAD-YAFVQHMI----YHLNEQGTLAV 342


>gi|332702161|ref|ZP_08422249.1| Protein of unknown function methylase putative [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552310|gb|EGJ49354.1| Protein of unknown function methylase putative [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 394

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 24/133 (18%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD+ +  G + + L       + + +D S  AL+ A  NA  NGV+++  T + D 
Sbjct: 219 GGRVLDVFSYVGGLGV-LAAVRGASEAICLDSSETALKYAARNAELNGVADKVRTERGDA 277

Query: 158 FSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F  +         FD +  +PP       D                    G+  Y  I  
Sbjct: 278 FDVLARLHDAGERFDAVSVDPPAFIKRKKDHPQ-----------------GMQAYTNINR 320

Query: 212 GVSRHLNKDGLCS 224
              R +   G   
Sbjct: 321 LAMRLVRDGGWLL 333


>gi|315426244|dbj|BAJ47887.1| methyltransferase [Candidatus Caldiarchaeum subterraneum]
 gi|315427875|dbj|BAJ49467.1| methyltransferase [Candidatus Caldiarchaeum subterraneum]
          Length = 318

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 11/114 (9%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
           +L ++   F PR  TE L            +  +   +LD+  G G   + + ++ P   
Sbjct: 144 KLDVARVFFSPRLSTERL--------RVAAQVGENETVLDMFAGVGPFSILIARKHPSTT 195

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPY 174
              V+ +  A      N   N V ++      D       ++  F+ ++ N P+
Sbjct: 196 IYAVEKNPAACSYLLENIKLNKVEKQVKPFCGDAAEIVPQLDKQFNRVIMNLPH 249


>gi|305663686|ref|YP_003859974.1| protein of unknown function Met10 [Ignisphaera aggregans DSM 17230]
 gi|304378255|gb|ADM28094.1| protein of unknown function Met10 [Ignisphaera aggregans DSM 17230]
          Length = 361

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             SL   E      ILDL TG G   L + K S     V  DI+  AL++ + +   N +
Sbjct: 194 EHSLVAKELSYARSILDLFTGVGPFALHIAKIS-NSYIVACDINRDALKLLRESIEMNRL 252

Query: 147 SERFDTLQSDWFSSVE-----GLFDVIVSNPPYIESVIV 180
               D L+ D  + +E     G FD I+ N P+    ++
Sbjct: 253 KGYIDILEIDSINFIENRGFIGKFDAIIMNLPHHAYKLI 291


>gi|283833842|ref|ZP_06353583.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Citrobacter youngae
           ATCC 29220]
 gi|291070510|gb|EFE08619.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Citrobacter youngae
           ATCC 29220]
          Length = 375

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F       ++     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFF--QTNPVVAGHLYATARDWVRQLPVDHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIV 169
            L     +P  K  G++I+ +A+  AK +A   G+    F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMKLTGIEIAPEAIACAKQSAQELGLQNLHFQALDSTQFATAQGEVPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|288940571|ref|YP_003442811.1| 50S ribosomal protein L11 methyltransferase [Allochromatium vinosum
           DSM 180]
 gi|288895943|gb|ADC61779.1| ribosomal protein L11 methyltransferase [Allochromatium vinosum DSM
           180]
          Length = 291

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTFEPRPETELLV------------DSALAFSLPRIEKRDVV--RILDLGT 106
           +  RL +      P     ++V             +  A  L  ++  D+    +LD G 
Sbjct: 108 FGRRLWVCPHGQPPGDPEGVVVALDPGLAFGTGHHATTALCLEWLDGADLAGKTVLDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + + VD   +AL     NA  NGV +R +    + F+      D
Sbjct: 168 GSGILAIA-ALKLGAARAIAVDHDPQALTATHDNAQANGVLDRLEIFAPESFTDPS--VD 224

Query: 167 VIVSN 171
           ++++N
Sbjct: 225 IVLAN 229


>gi|197251768|ref|YP_002145836.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|226725410|sp|B5F101|RUMB_SALA4 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|197215471|gb|ACH52868.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
          Length = 375

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|150402477|ref|YP_001329771.1| methyltransferase small [Methanococcus maripaludis C7]
 gi|150033507|gb|ABR65620.1| methyltransferase small [Methanococcus maripaludis C7]
          Length = 380

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++LD+ + TG    A+           VD+S KAL +A+ N   NGV   ++ + S
Sbjct: 206 KPGDKVLDVCSYTG--GFAVHAGINGGNVTAVDLSEKALAVAEENMELNGVK-NYNFIVS 262

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID----GLSH 205
           + F +++        FDV+V +PP       D           + +L+        GL  
Sbjct: 263 NAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDI----------KNALNAYNSMNYLGLKL 312

Query: 206 YRTIA 210
            + I 
Sbjct: 313 AKRIL 317


>gi|56414028|ref|YP_151103.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362951|ref|YP_002142588.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|81360323|sp|Q5PGN2|RUMB_SALPA RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|226725414|sp|B5BBV5|RUMB_SALPK RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|56128285|gb|AAV77791.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094428|emb|CAR59944.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 375

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|304385698|ref|ZP_07368042.1| cyclopropane-fatty-acyl-phospholipid synthase [Pediococcus
           acidilactici DSM 20284]
 gi|304328202|gb|EFL95424.1| cyclopropane-fatty-acyl-phospholipid synthase [Pediococcus
           acidilactici DSM 20284]
          Length = 391

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 32/182 (17%)

Query: 52  HRILGWRDFYNVRL----TLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  +G  DFY + L    T S   FE   ++      + +   + ++  +    +LD+G 
Sbjct: 115 HYDIGN-DFYKLWLDPTMTYSCAYFESDQDSLETAQMNKVRHIIQKLNPQPGKTLLDIGC 173

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G + L   KE    K VGV +S +  ++        G+S   +    D+    +  FD
Sbjct: 174 GWGTLMLTAAKEF-NLKVVGVTLSQEQYDLVNQRIQEEGLSGVAEVRLQDYRELGDEKFD 232

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I S                V  F+  +    G + L  Y    D V+++L  DG+  + 
Sbjct: 233 YITS----------------VGMFE-HV----GKENLGIY---FDNVAKYLKDDGVALI- 267

Query: 227 IG 228
            G
Sbjct: 268 HG 269


>gi|291547098|emb|CBL20206.1| 23S rRNA m(5)U-1939 methyltransferase [Ruminococcus sp. SR1/5]
          Length = 484

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 12/127 (9%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           + G   FY     ++  +S  TF       L  +   +     +       + DL +GTG
Sbjct: 241 LYGKDYFYEELLGLKFKIS--TFSFFQPNSLAAEILYSKVREYVGDTRDKVVFDLYSGTG 298

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFD 166
            +  A L  S   + +GV+I   A++ A+ NA  NG+ +    +  D       V    D
Sbjct: 299 TI--AQLAASVASEVIGVEIVEDAVKAARENAALNGI-DNCRFIAGDVLKVLDEVPEKPD 355

Query: 167 VIVSNPP 173
           +I+ +PP
Sbjct: 356 MIILDPP 362


>gi|291296035|ref|YP_003507433.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           ruber DSM 1279]
 gi|290470994|gb|ADD28413.1| ubiquinone/menaquinone biosynthesis methyltransferase [Meiothermus
           ruber DSM 1279]
          Length = 254

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 28/132 (21%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +++  RILDL TGTG + L L K +P  + +G D +   LE+A+  A+  G+   F    
Sbjct: 48  EKNPSRILDLATGTGDIALLLKKVAPEAEVIGGDFAPPMLELARQKALKAGLEVPFVEAD 107

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF-DPRISLDGGIDGLSHYRTIADGV 213
           +      +  FD +V             +    R+F D   +L         YR IA   
Sbjct: 108 ALRLPFPDQHFDAVV-------------IAFGFRNFADYHKALV------ELYRVIA--- 145

Query: 214 SRHLNKDGLCSV 225
                  G   +
Sbjct: 146 -----PGGRLCI 152


>gi|255034967|ref|YP_003085588.1| N-6 DNA methylase [Dyadobacter fermentans DSM 18053]
 gi|254947723|gb|ACT92423.1| N-6 DNA methylase [Dyadobacter fermentans DSM 18053]
          Length = 493

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 30/211 (14%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL----KESPF 121
            L    + P      +VD  L             R+LD   G G   + +     + +P 
Sbjct: 12  KLLGQVYTP----FHIVDKILGHCGFYEADLSEKRMLDPACGNGRFLVPMAEFIIRNTPP 67

Query: 122 FKG-------VGVDISCKALEIAKSN----AVTNGVSERFDTLQSDWFSSV--EGLFDVI 168
            +         G D+  KAL+  + N        G+   ++  + D       +  FD+I
Sbjct: 68  DRVAERLQQLHGWDVDRKALQQCRENLDALVAPLGLEIDWNLRKCDALKQWRSKDKFDLI 127

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           + NPPYI    +  L    R +  +            +       +R L  DGLC +   
Sbjct: 128 IGNPPYIR---IQHLPETQRKYIQKHYSFCSTGSTDAFIAFFQLATRLLAPDGLCGMITP 184

Query: 229 Y-----NQKVDVVRIF-ESRKLFLVNAFKDY 253
                      + + F + + L  +  ++D 
Sbjct: 185 NSFLVSESGGPLRKYFYKHQNLKHITNYRDI 215


>gi|167767379|ref|ZP_02439432.1| hypothetical protein CLOSS21_01898 [Clostridium sp. SS2/1]
 gi|317497461|ref|ZP_07955781.1| ribosomal protein L11 methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711354|gb|EDS21933.1| hypothetical protein CLOSS21_01898 [Clostridium sp. SS2/1]
 gi|291559324|emb|CBL38124.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [butyrate-producing bacterium SSC/2]
 gi|316895247|gb|EFV17409.1| ribosomal protein L11 methyltransferase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 319

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 80/218 (36%), Gaps = 46/218 (21%)

Query: 57  WRDFYN-------VRLTLSSDTFEPRPETELLVD--------------SALAFSLPRIEK 95
           W+ F+        + +  + +T E + E  ++V+              + L     +   
Sbjct: 113 WKKFFKPIRLDEQIVIKPTWETLEDQTEDMIVVEIDPGTAFGTGSHETTKLCIEGMKPYI 172

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154
           ++  +ILD+G G+G + + +  +      V  DI   A+  ++ N   N +S ++F+  Q
Sbjct: 173 KEDTKILDVGCGSGILSI-IGLKLGAGHAVLTDIDPHAISASEENFEVNHISKDQFEVYQ 231

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +     E           +  S+   C  + V +    ++             + + V 
Sbjct: 232 GNVLDDKE-----------FAASLGSKCYPVVVANI---LA--------DVISPLIEIVD 269

Query: 215 RHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
           + L +DG+  +  I   ++ ++     +    ++   +
Sbjct: 270 QFLAEDGVFVISGIIDTKEKEIADKLNAYGFDVIETRR 307


>gi|134034815|gb|ABO45733.1| microcystin synthetase N-methyltranserase domain [Microcystis sp.
           N-C 118/2]
          Length = 497

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 54/256 (21%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         E I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSEGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPTAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVAPHC 158

Query: 120 PFFKGVGVDISCKALE-IAKSNAVTNGV-SERFDTLQSDWFSSVE-GLFDVIVSNPPYIE 176
             +   G DIS  AL+ I + N     +   R  T  +D F  +E   FD I+ N     
Sbjct: 159 QHY--WGTDISSVALDHIQRINQEGPKLEQIRLFTRTADNFEGLESEGFDTIILN----- 211

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                     V  + P I          +   + +G  + L   G   +        DV 
Sbjct: 212 ---------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GDVR 246

Query: 237 RI-FESRKLFLVNAFK 251
            +   +     V  +K
Sbjct: 247 NLQLMAAFHADVELYK 262


>gi|121710144|ref|XP_001272688.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
 gi|119400838|gb|EAW11262.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
          Length = 260

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 44/198 (22%)

Query: 71  TFEPRPETELLVD--------SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
            +EP  ++ L +D          L+      +      I+++GTG+G V   +   S   
Sbjct: 15  IYEPSEDSYLFLDTLSSTSESEWLSTRFNSTQSPPSPLIVEVGTGSGVVLGFVAANSHEI 74

Query: 123 KG------VGVDISCKALEIAKSNAVTNGVSERFDT---------LQSDWFSSV-EGLFD 166
            G      +G D++  A    ++   T     + D          + +D  S +  G  D
Sbjct: 75  FGRRDILTLGTDVNRNACLATRTTVQTAIHERQHDAPLKSAHLSSVLADLCSPLRPGTVD 134

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR------------------ISLDGGIDGLSHYRT 208
           V++ NPPY+ +  +  L     + +                    ++  GG+DG+     
Sbjct: 135 VLLFNPPYVPTEDLPRL-PSATEHEAAAASMSRSAKFEHESYFLSLTYAGGMDGMETTNR 193

Query: 209 IADGVSRHLNKD-GLCSV 225
           + + +   L+ + G+  V
Sbjct: 194 LLEAIPGVLHPERGVAYV 211


>gi|37526990|ref|NP_930334.1| hypothetical protein plu3102 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786423|emb|CAE15476.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 274

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 30/137 (21%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             ++  D   +LD+ +G+G   L L + S      GVDI    L  A+  A   G+ +R 
Sbjct: 55  QWLQLSDSSHVLDVCSGSGGPALFLARTS-GCSVTGVDIHPHGLLTARQLAADFGLEDRS 113

Query: 151 DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           + + SD    +   +G FD +                  V     R++L           
Sbjct: 114 NFVDSDVRQPLPFPDGTFDALWC-------------IDSVIHIPDRLAL----------- 149

Query: 208 TIADGVSRHLNKDGLCS 224
                  R L   G   
Sbjct: 150 --LREWCRLLKPGGRFL 164


>gi|295099490|emb|CBK88579.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium
           cylindroides T2-87]
          Length = 485

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +   ++++ S+ +F          +     +    +      +LD   G G + L L   
Sbjct: 197 ELCGLKISFSNRSF--YQIHSEQCEVLYDMARKMCDLTKTDTVLDTYCGVGTIGLTLASS 254

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNP 172
                  GV+I+  A+E AK NA  N +      +  D              +DVI+ +P
Sbjct: 255 CK--SVTGVEINPDAIENAKLNAKQNNIK-NAKFISMDSTRYMMEAKKFRNHYDVIILDP 311

Query: 173 P 173
           P
Sbjct: 312 P 312


>gi|291535165|emb|CBL08277.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Roseburia
           intestinalis M50/1]
 gi|291539693|emb|CBL12804.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Roseburia
           intestinalis XB6B4]
          Length = 327

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 57/185 (30%), Gaps = 44/185 (23%)

Query: 78  TELLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           T+L +   L +     E   +    ++LD+G G+G + + +  +    + VG D+    +
Sbjct: 160 TQLCIRQLLKYIRGNAEYTPENKTPKVLDVGCGSGILSI-VALKLGASEVVGTDLDPDCM 218

Query: 135 EIAKSNAVTNGVSERF-DTLQSDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLE 186
                N   N +  R       +    VE         +D++V+N               
Sbjct: 219 TSTHENFEVNHLDSRLGTFYVGNLIDDVELQEKVGTEEYDIVVAN--------------- 263

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
                  ++             +A  +   L K G       I + +   V    E   L
Sbjct: 264 ------ILA--------DVIIPMAPVIPARLKKGGYFITSGIIDFKE-DQVKEAIEKAGL 308

Query: 245 FLVNA 249
            +V  
Sbjct: 309 TVVEI 313


>gi|134034823|gb|ABO45737.1| microcystin synthetase N-methyltranserase domain [Microcystis
           botrys N-C 264]
          Length = 497

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         E I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSEGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 155

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G +IS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 156 PHCQCYWGTNISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 211

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 212 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 244

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 245 VRNLQLMEAFHADVELYK 262


>gi|152986547|ref|YP_001350605.1| hypothetical protein PSPA7_5273 [Pseudomonas aeruginosa PA7]
 gi|226712961|sp|A6VC20|RSMC_PSEA7 RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|150961705|gb|ABR83730.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 332

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 23/141 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   + +  P  +   +D+   A+  ++    
Sbjct: 177 DRGSALLLEHLDDLPKGHLLDFGCGAGVLGALVKRRYPASRLTLLDVDAFAVASSRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + + +D           IVSNPP+ + V  D    E                
Sbjct: 237 ANGLDG--EVIAADGIDGAPRGLAAIVSNPPFHQGVHTDYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +    + HL   G  
Sbjct: 279 -----RLLQRAAEHLAAGGEL 294


>gi|332712019|ref|ZP_08431949.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332349347|gb|EGJ28957.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 440

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTL 153
             D   ILD G GTG   L L + +P  K +G+DIS ++L++A+      G  E  F  L
Sbjct: 55  NPDQKVILDAGCGTGYGSLTLAEANPGAKIIGIDISEQSLDLARKRLSHYGFDEAEFHQL 114

Query: 154 QSDWFSSVEGLFDVIVS 170
                 S    FD I  
Sbjct: 115 SIYDLPSAGWEFDYINC 131


>gi|317182291|dbj|BAJ60075.1| cyclopropane fatty acid synthase [Helicobacter pylori F57]
          Length = 389

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQKLGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|300867820|ref|ZP_07112462.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506]
 gi|300334151|emb|CBN57634.1| methyltransferase type 12 [Oscillatoria sp. PCC 6506]
          Length = 393

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   +   +  +RILD G G+G     L+  +P    VG+D+S   LE+AK     
Sbjct: 41  AAYSFCTGQKPDKQDIRILDAGCGSGVSTEYLVHLNPEASVVGIDLSSGTLEVAKERCRR 100

Query: 144 NGVSERFDTLQSDWFSS--VEGLFDVIVS 170
           +G +ER        + +  +EG FD+I  
Sbjct: 101 SG-AERVAFHHLSLYDAGQLEGEFDLINC 128


>gi|213029731|ref|ZP_03344178.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 367

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|312879753|ref|ZP_07739553.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Aminomonas
           paucivorans DSM 12260]
 gi|310783044|gb|EFQ23442.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase [Aminomonas
           paucivorans DSM 12260]
          Length = 285

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 33/161 (20%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L     +    ++D+GTG+G + L    +      V  D+    L   + N   N +   
Sbjct: 140 LMETRVKSGDSVVDVGTGSGILSLG-ALKLGAASVVARDLDGAVLAEVEENLDLNDLRGA 198

Query: 150 FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
               + D      G  D++ +N                   +P +              +
Sbjct: 199 VRLEEGDLLRGFAGPVDLLTAN----------------IVLEPLL-------------QL 229

Query: 210 ADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVN 248
              V R L   G       +G  +K   +   E   L    
Sbjct: 230 LPDVRRVLKPGGWALFSGLLG-TEKQTFLAALEEAGLHPAE 269


>gi|303237158|ref|ZP_07323728.1| ribosomal protein L11 methyltransferase [Prevotella disiens
           FB035-09AN]
 gi|302482545|gb|EFL45570.1| ribosomal protein L11 methyltransferase [Prevotella disiens
           FB035-09AN]
          Length = 287

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T+++VD  L   L          ILD G GTG + +   K +   +    DI   +++  
Sbjct: 139 TQMIVDELLNMDLAN------KTILDCGCGTGILSIVAAKRNAK-EVCAYDIDEWSVKNT 191

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           + NA  N V         +        FD++++N
Sbjct: 192 EYNANLNNVELSVKEGNCNIIKEFNKKFDIVIAN 225


>gi|300309728|ref|YP_003773820.1| 50S ribosomal protein L11 methyltransferase [Herbaspirillum
           seropedicae SmR1]
 gi|300072513|gb|ADJ61912.1| 50S ribosomal subunit protein L11 methyltransferase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 304

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L          +   +LD G G+G + L +  +    + +GVDI  +ALE A  N   N 
Sbjct: 155 LCMEWLEANATEAGTLLDYGCGSGILAL-VAAKIGVPQVIGVDIDPQALEAAHHNTERNH 213

Query: 146 VSERFDTLQSDWFSSVEG-LFDVIVSN 171
            +  +   +    +  EG  FDV+V+N
Sbjct: 214 CTATYYLPEPFAQAHPEGERFDVVVAN 240


>gi|224368228|ref|YP_002602391.1| putative small methyltransferase [Desulfobacterium autotrophicum
           HRM2]
 gi|223690944|gb|ACN14227.1| putative small methyltransferase [Desulfobacterium autotrophicum
           HRM2]
          Length = 189

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 56/178 (31%), Gaps = 36/178 (20%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            +   +L ++    E RP  + + +S       RI      R+LDL  GTGA+ L  L  
Sbjct: 7   KYRGKKL-ITPRGLETRPTLDRIRESIFNIISQRIAN---ARVLDLFAGTGALGLEALSR 62

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS------VEGLFDVIVSNP 172
           +  F    VD S +A  +   N            +Q D   +          FD++  +P
Sbjct: 63  NAGF-ATFVDNSREACTVINKNIALLQFEHCTTVIQHDLTRAGTLARIRPKKFDLVFMDP 121

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           PY + +I   L                                 L  + L   E G  
Sbjct: 122 PYRKGLIDAVLENS-----------------EFI--------DLLADNALVVCEHGAQ 154


>gi|213423951|ref|ZP_03356931.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
          Length = 355

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|167755339|ref|ZP_02427466.1| hypothetical protein CLORAM_00853 [Clostridium ramosum DSM 1402]
 gi|167704278|gb|EDS18857.1| hypothetical protein CLORAM_00853 [Clostridium ramosum DSM 1402]
          Length = 400

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 22/131 (16%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             ++LD  + TG   L         + V VD+S  AL+   +NA  N +      ++ D 
Sbjct: 228 GKKVLDCFSHTGGFALN-AAYGKAKEVVAVDVSQTALDQGYANAKLNNLQGCISFVKDDV 286

Query: 158 FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           F  ++    G FD+IV +PP                   R ++D   +G   Y+ I    
Sbjct: 287 FDYLDKCKKGQFDIIVLDPPAFTKS--------------RRTVDHAYNG---YKKINMKA 329

Query: 214 SRHLNKDGLCS 224
            + L + G   
Sbjct: 330 MKLLGRGGYLI 340


>gi|114771196|ref|ZP_01448616.1| ribosomal protein L11 methyltransferase, putative [alpha
           proteobacterium HTCC2255]
 gi|114548121|gb|EAU51008.1| ribosomal protein L11 methyltransferase, putative [alpha
           proteobacterium HTCC2255]
          Length = 289

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              I+D+G GT  + +A     P  K +  DI   A E +K+NA+ N +S+R D +    
Sbjct: 149 GKNIVDIGCGTAVLAMAAALCWPG-KVLASDIDEIATETSKANAIANDLSDRIDVITCAG 207

Query: 158 FSSVE----GLFDVIVSN 171
           F   E      +D+I++N
Sbjct: 208 FDHPELRAAAPYDLILAN 225


>gi|210135101|ref|YP_002301540.1| adenine specific DNA methyltransferase [Helicobacter pylori P12]
 gi|210133069|gb|ACJ08060.1| adenine specific DNA methyltransferase [Helicobacter pylori P12]
          Length = 383

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K +   +L+   G G    + LK    
Sbjct: 7   NLDIKTLGQVFTPKN----IVDFMLTL------KHNQGSVLEPSAGDG----SFLKRLKK 52

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 53  A--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 96

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 97  APSAKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPQGELIFITPRD 140


>gi|328884122|emb|CCA57361.1| hypothetical protein SVEN_4075 [Streptomyces venezuelae ATCC 10712]
          Length = 347

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%)

Query: 55  LGWRDFYNVRLTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           +GW + ++  L     +F +P  E +L+ +   A      +      + D+G G G   L
Sbjct: 125 VGWAE-HDAALDTGMGSFFQPTYEHKLVPEWLPALHQVTDKLAAGGTVADVGCGVGHTTL 183

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
            + K  P     G D S +A+ IA+  A   G+S R   
Sbjct: 184 LIAKAFPNATVHGFDYSEEAISIARELAEEAGLSGRVVF 222


>gi|222112117|ref|YP_002554381.1| ribosomal protein l11 methyltransferase [Acidovorax ebreus TPSY]
 gi|221731561|gb|ACM34381.1| ribosomal protein L11 methyltransferase [Acidovorax ebreus TPSY]
          Length = 297

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +   K     +   VDI   A+E  + NA  NGV        +    
Sbjct: 170 RVLDYGCGSGILAIGAAK-FGATEIDAVDIDTAAVESTRQNAQANGVQVN-----AGLPE 223

Query: 160 SVEGLFDVIVSN 171
             +G +  +++N
Sbjct: 224 RAQGQYQTVLAN 235


>gi|254461787|ref|ZP_05075203.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacterales
           bacterium HTCC2083]
 gi|206678376|gb|EDZ42863.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 307

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            ++ K+ S H  LG  +FY + L    T SS  FE   E+      A  A  +  +  ++
Sbjct: 32  EQARKNISYHYDLGN-EFYGLWLDDTMTYSSAIFETGQESTEKAQIAKYASMIDEMGAKE 90

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       KE    +  G+ IS +  + A+      G+S+  D    D+
Sbjct: 91  GDHVLEIGCGWGGFAEYAAKER-GIRVTGLTISEEQFKYAQKRIEKAGISDLVDFKLQDY 149

Query: 158 FSSVEGLFDVIVS 170
                G +D I S
Sbjct: 150 RDE-TGTYDGIAS 161


>gi|20088929|ref|NP_615004.1| hypothetical protein MA0030 [Methanosarcina acetivorans C2A]
 gi|19913774|gb|AAM03484.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 260

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 33/135 (24%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV-VRILDLGTGTGAVCLAL 115
           W+ F++  +      F P P    +++  L       E+ +  + IL+LG+GTG +   +
Sbjct: 26  WQAFFSTVIE-----FIPEP----ILEPILESIPEGTERTNREIEILELGSGTGFLTSLI 76

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------------- 162
            KE P  K   +D + + L +AK       + +    ++ D     E             
Sbjct: 77  RKEKPDAKITCIDRNPEMLAVAKE---KPELQKNVTFIEGDILEECEKWKNLGGQEGPGW 133

Query: 163 -------GLFDVIVS 170
                  G FD +VS
Sbjct: 134 KENSEGKGKFDAVVS 148


>gi|332139683|ref|YP_004425421.1| ribosomal RNA small subunit methyltransferase C [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|226712935|sp|B4S2L3|RSMC_ALTMD RecName: Full=Ribosomal RNA small subunit methyltransferase C;
           AltName: Full=16S rRNA m2G1207 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rsmC
 gi|327549705|gb|AEA96423.1| ribosomal RNA small subunit methyltransferase C [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 360

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 28/157 (17%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
              F  +      +D+     L ++       +LD   G G +   ++ + P  K    D
Sbjct: 197 PGVFSYKE-----LDAGTELLLEKLSTSLSGDVLDFACGAGVIASYIMLKYPHLKLHLTD 251

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVR 188
           +S  A+  +      N ++       +D    +      IV+NPP+   +  D       
Sbjct: 252 VSALAIYCSALTLAENQLAA--TLYAADGLHGMTNKVQHIVTNPPFHTGIKTD------- 302

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          +  +         L + G   +
Sbjct: 303 --------------YTVTKRFISDAKARLTRGGTMQM 325


>gi|194334968|ref|YP_002016828.1| ribosomal protein L11 methyltransferase [Prosthecochloris aestuarii
           DSM 271]
 gi|194312786|gb|ACF47181.1| ribosomal L11 methyltransferase [Prosthecochloris aestuarii DSM
           271]
          Length = 290

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 6/94 (6%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTL--QS 155
             ILD+GTGTG + +A  K       + VD +  A E A+ N   N     R + L  + 
Sbjct: 151 ATILDIGTGTGVLAIAARKLGNRHTILAVDNNDWAAENARENITENHTDNIRVEMLDAED 210

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           D    ++  +D+I++N   I   ++D +   +++
Sbjct: 211 DLAEILDQQYDLILAN---INRNVIDRILPAIKN 241


>gi|308389961|gb|ADO32281.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis alpha710]
          Length = 330

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 197 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDG 255

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 256 L----PQGQFDVVVAN 267


>gi|297264266|ref|XP_002798950.1| PREDICTED: methyltransferase like 5 isoform 2 [Macaca mulatta]
 gi|297264268|ref|XP_001105118.2| PREDICTED: methyltransferase like 5 isoform 1 [Macaca mulatta]
          Length = 209

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   I DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKVIADLGCGCGVLSIGTAMLGAGLCV-GFDIDEDALEIFNRNVEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|219666410|ref|YP_002456845.1| methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
 gi|219536670|gb|ACL18409.1| Methyltransferase type 11 [Desulfitobacterium hafniense DCB-2]
          Length = 252

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 17/167 (10%)

Query: 89  SLPRIEKRDVVRILDLGTGTGA--VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             P ++    + ILD+G G G   + L+ L          VD + K L  A+ N    G 
Sbjct: 38  LKPFVQTDRKLEILDVGCGAGFFEIFLSCLGH----HVTAVDFNGKMLAEARKNIEKLGR 93

Query: 147 SERFDTLQSDW--FSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDG-GIDG 202
            E    +Q D    +  + +FD+++S N  ++        G  +R   P   L     + 
Sbjct: 94  PELTKLMQMDAQNLAFQDSVFDIVISRNMTWVLENPQRAYGEWLRVLKPHGKLINFDANW 153

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGY-----NQKVDVVRIFESRKL 244
             H R   D   R+  +     VE G+     +   ++  IF    L
Sbjct: 154 FLHLRD--DTARRNFEEGQAAVVEHGFELKESDHGGELDNIFRELPL 198


>gi|189913048|ref|YP_001964937.1| Cyclopropane fatty acid synthase-related methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|189913377|ref|YP_001964606.1| Putative cyclopropane-fatty-acyl-phospholipid synthase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
 gi|167777724|gb|ABZ96024.1| Cyclopropane fatty acid synthase-related methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167781445|gb|ABZ99742.1| Putative cyclopropane-fatty-acyl-phospholipid synthase [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 356

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 26/145 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L  ++ R E ++ +++LDLG G G++ L + ++ P  K  GV  S    E     A 
Sbjct: 116 EEMLRITVERAEIKNGMKVLDLGCGWGSISLYIAEKFPKCKVTGVSNSRTQKEFIDKRAK 175

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+       +     + +  FD IVS              +E+ +             
Sbjct: 176 ERGLKNLTIITKDMNDFTTKDKFDRIVS--------------VEMLEH------------ 209

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEI 227
           + +Y  + + +S+ L  DG   V I
Sbjct: 210 MKNYEKLFEKLSKFLVADGKFFVHI 234


>gi|160938430|ref|ZP_02085785.1| hypothetical protein CLOBOL_03328 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438803|gb|EDP16560.1| hypothetical protein CLOBOL_03328 [Clostridium bolteae ATCC
           BAA-613]
          Length = 410

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 21/180 (11%)

Query: 14  VTGLSSHQ-VIVDPDSVLDDRQRFFLTNAIVRSLKHESIH-RILGWRDFYNVRLTLSSDT 71
             G+   + VIVD    +       +     RS     +   +   + F         + 
Sbjct: 135 ALGIDRLKPVIVDKLRKVMAEDGITIRGVYERSDAKVRLQEGMERHKGFMGDAFDTKVEI 194

Query: 72  FEPRPETELLVDSA------LAFSLPRIEKRDVVR------ILDLGTGTGAVCLALLKES 119
            E      + V+        L     R+  +++ R      +LD  T TG+  L     +
Sbjct: 195 LENGVRYMVDVEDGQKTGFFLDQKYNRLAVQNLCRRIQPKQVLDCFTHTGSFALN-AGLA 253

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
                +GVD S  A+  A+ NA  NG++E+     +D F  +         +DV++ +PP
Sbjct: 254 GSAHVLGVDASELAVNQARENAALNGLTEQVQFECADVFDLLPRLEQEGRKYDVVILDPP 313


>gi|126737575|ref|ZP_01753305.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
           SK209-2-6]
 gi|126720968|gb|EBA17672.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseobacter sp.
           SK209-2-6]
          Length = 447

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 11/145 (7%)

Query: 34  QRFFL---TNAIVRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA- 85
           +RF      N   ++ K+ S H  LG  DFY + L    T SS  F+   E+      A 
Sbjct: 158 ERFRFWMQRNHRSQAKKNISYHYDLGN-DFYALWLDETMTYSSALFKTGQESLERAQQAK 216

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  + ++  +    +L++G G G       KE    +  G+ +S +  + AK+     G
Sbjct: 217 YASMVDQMGAKPGDHVLEIGCGWGGFAEYAAKER-GLRVTGLTLSQEQYDYAKARIARAG 275

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S++ +    D +    G FD I S
Sbjct: 276 LSDQVEFRIQD-YRDCSGRFDGIAS 299


>gi|54294828|ref|YP_127243.1| hypothetical protein lpl1906 [Legionella pneumophila str. Lens]
 gi|53754660|emb|CAH16145.1| hypothetical protein lpl1906 [Legionella pneumophila str. Lens]
          Length = 630

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 18/145 (12%)

Query: 36  FFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPR--PETELLVDSALAFSLPRI 93
               +   + + +E +  IL    F + +  +S     P+   E   L       + P I
Sbjct: 393 KQYYDFYWQRMANEKLSNIL---RFTDPKFNVSWP---PKTAEEANFLETWMTKTATPLI 446

Query: 94  EK-------RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           +             +LD+G G G +  AL +  P  K    ++  ++ +IA+ N    G+
Sbjct: 447 QTLLACLDLNQYRSVLDVGGGDGTIACALAQAYPHLKITVYNL-PESAKIAQKNIDAMGL 505

Query: 147 SERFDTLQSDWFSS--VEGLFDVIV 169
            +R      D+ +       FD+I+
Sbjct: 506 QKRISVFAGDFINDERFPAGFDLIL 530


>gi|315635030|ref|ZP_07890311.1| 23S rRNA (uracil-5-)-methyltransferase [Aggregatibacter segnis ATCC
           33393]
 gi|315476292|gb|EFU67043.1| 23S rRNA (uracil-5-)-methyltransferase [Aggregatibacter segnis ATCC
           33393]
          Length = 438

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 24/176 (13%)

Query: 9   SFLCRVTGL---SSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY--NV 63
             L  +  +       ++          ++  L   +    +H+SI    G + +Y    
Sbjct: 209 MLLRHIKNVGETDRTLLLRF-------AEQHQLMLFVQ---EHDSIEHWYGEQPYYRLGD 258

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +TL  D  +       L    +A +L  +E      +LDL  G G   L L ++     
Sbjct: 259 DITLQFDIRDFIQINAQLNRQMIATALDWLELNPQDHVLDLFCGMGNFTLPLSRKVKSAV 318

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPP 173
           G+        +E A++NA  NG        ++D           +  F+ I+ +PP
Sbjct: 319 GIEGV--SAMVEKARANAERNGC-HNVQFYRTDLDKPFISQAWAQQPFNKILLDPP 371


>gi|288870960|ref|ZP_06115918.2| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288865256|gb|EFC97554.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 505

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 25/171 (14%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V++AL   L +   ++  ++LD   G G + +   K        G+DI  +A+E A+ N 
Sbjct: 341 VNAALTVKLAQPYMKEGAQVLDPFCGVGTMLIERHKAVKAGTMYGLDILEEAIEKARENT 400

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              G       +  D+F    E LFD I++N P+    I      E+ +           
Sbjct: 401 AAAGQI--IHYINRDFFDFKHEYLFDEIITNMPF---KIGRKTEEEIEN----------- 444

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ-KVDVVRIFESRKLFLVNAF 250
                Y        + L  DG+  +   Y+     V ++  +    +   F
Sbjct: 445 ----LYEAFFSSTKKVLKDDGIMIL---YSHNAGHVKKMAPANGFTVSETF 488


>gi|269123056|ref|YP_003305633.1| O-methyltransferase-like protein [Streptobacillus moniliformis DSM
           12112]
 gi|268314382|gb|ACZ00756.1| O-methyltransferase-like protein [Streptobacillus moniliformis DSM
           12112]
          Length = 203

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++RL           +   LVD         +   ++  +LD+G G G +   L ++  F
Sbjct: 9   DLRLNCGKGALNITTDALDLVDFVKENL---VNIDEIGSMLDIGAGIGTITFMLYRQRNF 65

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
                V+I     +I  SN + N ++     +    F  +   F  I+SNPP+ ++    
Sbjct: 66  TDFHAVEIQKDVYDILLSNILLNNMTVSAYNMDIKEF-HLPFKFKYIISNPPFYKTNSGY 124

Query: 182 CLGLEV 187
               EV
Sbjct: 125 MPQDEV 130


>gi|229822871|ref|ZP_04448941.1| hypothetical protein GCWU000282_00161 [Catonella morbi ATCC 51271]
 gi|229787684|gb|EEP23798.1| hypothetical protein GCWU000282_00161 [Catonella morbi ATCC 51271]
          Length = 319

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 41/167 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER------ 149
           R   R+LD+GTG+G +   +       +  G D+  +A++ A  N V     +       
Sbjct: 169 RGGERVLDVGTGSGVLAF-VAAALGAKEVWGYDLDPQAVDSALQNLVHQQERQDELAKVF 227

Query: 150 ----FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                     D    V+   +VIV+N   +  ++V+ L                      
Sbjct: 228 KETPIHFQVKDLLKGVDWPVEVIVAN--ILPHILVNML---------------------- 263

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFK 251
                +   R L +DG   +  I   +   ++   E+    LV   +
Sbjct: 264 -----EDAHRLLTEDGYLILGGILNEKADQLIEDLEAHGFHLVQRVQ 305


>gi|297619155|ref|YP_003707260.1| methylase of polypeptide chain release factors-like protein
           [Methanococcus voltae A3]
 gi|297378132|gb|ADI36287.1| Methylase of polypeptide chain release factors-like protein
           [Methanococcus voltae A3]
          Length = 333

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 71/226 (31%), Gaps = 62/226 (27%)

Query: 58  RDFYNVRLTLSSDTFEPRP-ETELLVDSALAFSLPRIE----------KRDVVRILDLGT 106
           +  Y++ +   S+   P P      V   L   +  ++          K   + +L++GT
Sbjct: 67  KGLYDLNMQFHSNALVPTPVNRYTFVYYILNEFMNIMQNTYNLKDINIKPKNINVLEIGT 126

Query: 107 GTGAVCLALLKESPF-----------FKGVGVDISCKALEIAKSNAV------------- 142
           G+G + + + K                     DI  + LEIA+ N               
Sbjct: 127 GSGILSILMSKYFYELTKLDDKLINSINIYATDIKEEYLEIARKNYNNNINGNINNNINK 186

Query: 143 --------------TNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLG 184
                            V   F   + +   ++    +  FD+I + PPY     V    
Sbjct: 187 NNKNNKNNKNNINTKLKVPVDFINSKGNLIKNINELSDYKFDIIFTYPPYYSDHSVAS-- 244

Query: 185 LEVRDF-----DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             VR F     +    + GG  G      + +     LN++G+ + 
Sbjct: 245 --VRSFGGADAEKVELIGGGKYGEKFSEQLIEEAKDFLNENGIIAF 288


>gi|154502739|ref|ZP_02039799.1| hypothetical protein RUMGNA_00553 [Ruminococcus gnavus ATCC 29149]
 gi|153796622|gb|EDN79042.1| hypothetical protein RUMGNA_00553 [Ruminococcus gnavus ATCC 29149]
          Length = 190

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 30/147 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD          + ++ + +LD+  GTGA+  AL +E        VD+S K +EIA    
Sbjct: 21  VDQIRRMIAFLSDIQEGMSVLDVACGTGAMFEAL-RERKPSHITAVDLSEKMIEIAARKV 79

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             + +   F+    D F   +  FD I+     I +     +  +               
Sbjct: 80  EGDSL---FELQCRDLFEMTQETFDRII-----IYNAYPHFMEKD--------------- 116

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIG 228
                  +   V+  LN  G   V  G
Sbjct: 117 ------KVVQKVAELLNPGGRFIVAHG 137


>gi|57530384|ref|NP_001006389.1| trimethylguanosine synthase [Gallus gallus]
 gi|53133774|emb|CAG32216.1| hypothetical protein RCJMB04_20d7 [Gallus gallus]
          Length = 889

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 22/176 (12%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A   ++   +  +   I+D   G G   +     S   + + VDI  + L +A+SNA   
Sbjct: 716 AEHIAVRVAQSFNCNTIVDAFCGVGGNAIQFALTSK--RVIAVDIDPEKLSLARSNAEVY 773

Query: 145 GVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV+ + + +  D+   + +   DV+  +PP+      D    E+ D    I      DG 
Sbjct: 774 GVANQIEFVCGDFMVLAADLKADVVFLSPPW---GGPDYATAEIFDIQTMIC----PDGF 826

Query: 204 SHYR---TIADGVSRHL------NKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
             +R    I + +   L      N+    +   G   KV++ + F + KL  + A+
Sbjct: 827 EIFRLSKKITNNIVYFLPRNTDINQIASLA---GPGGKVEIEQNFLNNKLKTITAY 879


>gi|328473143|gb|EGF43991.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus 10329]
          Length = 418

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    ++++GTG GA+ + +  E    +     IS +  E A+   V  G
Sbjct: 190 MERLCQQLDLQSTDHVIEIGTGWGAMAIYMA-EQYGCRVTTTTISEEQYEYARQQIVQRG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R   L+ D + ++ G +D +VS    IE+V    L   ++  +  +       GL  
Sbjct: 249 LADRITLLKED-YRNLTGTYDKLVS-IEMIEAVGKQFLASYIKKCESLL----KPRGLMA 302

Query: 206 YRTI-------------ADGVSRHLNKDGLC 223
            + I              D + +++   G  
Sbjct: 303 IQAITIADQRYDYYSNNVDFIQKYIFPGGFL 333


>gi|308184695|ref|YP_003928828.1| type II DNA modification (methyltransferase) [Helicobacter pylori
           SJM180]
 gi|308060615|gb|ADO02511.1| type II DNA modification (methyltransferase) [Helicobacter pylori
           SJM180]
          Length = 381

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 59/171 (34%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K++   +L+   G G    + LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KQNQGSVLEPSAGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL  +G        +
Sbjct: 96  IVPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPNGELIFITPRD 140


>gi|120612220|ref|YP_971898.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax citrulli
           AAC00-1]
 gi|120590684|gb|ABM34124.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax citrulli
           AAC00-1]
          Length = 377

 Score = 57.0 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG   +  + +  +  SS  +    E+     +  L      +       +L++G G
Sbjct: 111 HYDLGNDFYAQWLDPSMLYSSAIYPTGTESLEEAQAVKLERIAQHLALEPGDDVLEIGCG 170

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            GA+   + +     +  G+ +S + L  A+      G+ +  +    D +  V G FD 
Sbjct: 171 WGALAQDMAQR--GARVTGITLSAEQLRFARERIRQAGLQDAVELRLQD-YRDVPGTFDH 227

Query: 168 IVS 170
           IVS
Sbjct: 228 IVS 230


>gi|256421027|ref|YP_003121680.1| methyltransferase type 11 [Chitinophaga pinensis DSM 2588]
 gi|256035935|gb|ACU59479.1| Methyltransferase type 11 [Chitinophaga pinensis DSM 2588]
          Length = 252

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 52/166 (31%), Gaps = 42/166 (25%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              +  ++     +ILDLG GTG +   + +     K  G+D S   +  AK     +  
Sbjct: 20  NNLIEWLQPAAGEQILDLGCGTGELTAQVAES--GAKVTGLDSSPAMIASAKE----HFP 73

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPP--YIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
              F    +  FS +   FD + SN    +I                   +LD       
Sbjct: 74  QVTFQVADATSFS-LPEQFDAVFSNATLHWIRQQEK--------------ALD------- 111

Query: 205 HYRTIADGVSRHLNKDGLCSVEIG-----YNQKVDVVRIFESRKLF 245
               I     +HL   G   +E+G      +    + +    R   
Sbjct: 112 ---RI----HQHLKPGGRFVLEMGGKGNVDDITGALEKAMADRGYT 150


>gi|198242601|ref|YP_002214847.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|226725411|sp|B5FPZ6|RUMB_SALDC RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|197937117|gb|ACH74450.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|326622600|gb|EGE28945.1| 23S rRNA (uracil-5-)-methyltransferase rumB [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|50084790|ref|YP_046300.1| putative methyltransferase [Acinetobacter sp. ADP1]
 gi|49530766|emb|CAG68478.1| conserved hypothetical protein; putative methyltransferase
           [Acinetobacter sp. ADP1]
          Length = 351

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 40/174 (22%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLP----RIEKRDVVRILDLGTGTGAVCLALLK 117
             RL  S+  F   P  +  +D A  FSL     R + ++  ++L+LG G G+  L + +
Sbjct: 85  GKRLKYSACYF---PHAKTTLDEAEEFSLQLYSERAKLQNGQKVLELGCGWGSFTLWMAE 141

Query: 118 ESPFFKGVGVDISCK----ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             P     GV  S       LE A+   ++N      D    +      G FD +VS   
Sbjct: 142 HYPQSHITGVSNSATQRQHILEQAQQRGLSNIEIVTCDV---NVLELQNGHFDRVVSV-- 196

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    +   VR+                Y+ + + +   L  +GL    I
Sbjct: 197 --------EMFEHVRN----------------YQRLFEKIQNWLKPEGLLWCHI 226


>gi|28897897|ref|NP_797502.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260364467|ref|ZP_05777092.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus K5030]
 gi|260877055|ref|ZP_05889410.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AN-5034]
 gi|260896844|ref|ZP_05905340.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus Peru-466]
 gi|28806110|dbj|BAC59386.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308086998|gb|EFO36693.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus Peru-466]
 gi|308093870|gb|EFO43565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AN-5034]
 gi|308114624|gb|EFO52164.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus K5030]
          Length = 418

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    ++++GTG GA+ + +  E    +     IS +  E A+   V  G
Sbjct: 190 MERLCQQLDLQSTDHVIEIGTGWGAMAIYMA-EQYGCRVTTTTISEEQHEYARQQIVQRG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R   L+ D + ++ G +D +VS    IE+V    L   ++  +  +       GL  
Sbjct: 249 LADRITLLKED-YRNLTGTYDKLVS-IEMIEAVGKQYLASYIKKCESLL----KPSGLMA 302

Query: 206 YRTI-------------ADGVSRHLNKDGLC 223
            + I              D + +++   G  
Sbjct: 303 IQAITIADQRYDYYSNNVDFIQKYIFPGGFL 333


>gi|317180240|dbj|BAJ58026.1| Type II modification enzyme [Helicobacter pylori F32]
          Length = 386

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 58/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K++   +L+   G G    + LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KQNHGSVLEPSAGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|308188195|ref|YP_003932326.1| ribosomal RNA small subunit methyltransferase D [Pantoea vagans
           C9-1]
 gi|308058705|gb|ADO10877.1| putative ribosomal RNA small subunit methyltransferase D [Pantoea
           vagans C9-1]
          Length = 372

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 24/136 (17%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-- 148
             + +     I+DLG G G V L  L+++P  +   +D S  A+  +K N   N   +  
Sbjct: 219 QHLPENIEGEIVDLGCGNGVVGLVALEQNPQAEVHFLDESYMAVASSKLNVEVNRPDDLS 278

Query: 149 RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
           R   L ++  S         ++ NPP+ +          V D    ++            
Sbjct: 279 RCQFLVNNVLSGYPSDRLHAVLCNPPFHQ-------QHAVTDH---LAW----------- 317

Query: 208 TIADGVSRHLNKDGLC 223
            +     R L   G  
Sbjct: 318 QMFRDAKRCLQYGGEL 333


>gi|297182174|gb|ADI18345.1| 16S RNA g1207 methylase rsmC [uncultured actinobacterium
           HF4000_04C13]
          Length = 207

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 6/129 (4%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
               V ++DLG G G +   +    P  +   VD++ +A  + ++           + + 
Sbjct: 39  PTGPVDLMDLGCGYGPIACTMASRRPDARVWAVDVNERARGLCRA-NAAAAGLANVEVVA 97

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI-ADGV 213
            D     +     I SNPP    +    L   +  +  R++  GG   L   R + AD +
Sbjct: 98  PDDVPD-DVRLAAIWSNPPI--RIGKPALHDLLATWLDRLAP-GGTAHLVVQRHLGADSL 153

Query: 214 SRHLNKDGL 222
           +R L+  G 
Sbjct: 154 ARWLDDRGW 162


>gi|237751421|ref|ZP_04581901.1| type I restriction-modification system [Helicobacter bilis ATCC
           43879]
 gi|229372787|gb|EEO23178.1| type I restriction-modification system [Helicobacter bilis ATCC
           43879]
          Length = 534

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 28/169 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG----VGV 127
           F P+  + LL             K+ V ++ D   G+ ++ L   K            G 
Sbjct: 217 FTPQEVSHLLARLV------SYGKQSVNKVYDSACGSSSLLLQFAKVLGKNNVKNGFYGQ 270

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
           +I+  +  + + N + + V  E FD    D F       +  FD IVSNPPY      D 
Sbjct: 271 EINPTSYNLCRINMILHNVGYENFDISLGDTFLEPKHEDDEPFDAIVSNPPYSIKWAGDS 330

Query: 183 LGLEVRDFDPRISLDG------GIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +   DPR +  G        D L+    +       L+  G C++
Sbjct: 331 NP--LLINDPRFAPAGVLAPKFYAD-LAFVMHMLS----WLSPSGTCAI 372


>gi|168230788|ref|ZP_02655846.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471664|ref|ZP_03077648.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194458028|gb|EDX46867.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|205334770|gb|EDZ21534.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|326510103|dbj|BAJ87268.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 25/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+LDL   +G   L+  K        G+D S  AL++A  N + N +  ER   L+ D  
Sbjct: 280 RVLDLCCYSGGFALSAAK-GGATNVTGIDSSGSALDLANENILLNKLDAERISFLKEDAT 338

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
           + ++G      L+D+++ +PP +                          G+  YR++   
Sbjct: 339 AFMKGAISRNELWDLVILDPPKLAPRKKVLQSAS---------------GM--YRSLNAL 381

Query: 213 VSRHLNKDGLCS 224
             + +   GL  
Sbjct: 382 AMQVVKPGGLLM 393


>gi|238794626|ref|ZP_04638232.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC
           29909]
 gi|238726015|gb|EEQ17563.1| Ribosomal protein L11 methyltransferase [Yersinia intermedia ATCC
           29909]
          Length = 293

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQS 155
           D   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +  L  
Sbjct: 158 DGKTVIDFGCGSGILAIA-ALKLGATRAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 216

Query: 156 DWFSSVEGLFDVIVSN 171
           D  + +    DV+V+N
Sbjct: 217 DQPADLSA--DVVVAN 230


>gi|124265427|ref|YP_001019431.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylibium
           petroleiphilum PM1]
 gi|124258202|gb|ABM93196.1| cyclopropane-fatty-acyl-phospholipid synthase [Methylibium
           petroleiphilum PM1]
          Length = 420

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 6/124 (4%)

Query: 52  HRILGWRDFY---NVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
           H  LG   +    +  ++ SS  F+  PR  T     + +  +L         R+L++G 
Sbjct: 148 HYDLGNAFYALWLDETMSYSSAWFDGDPRRSTAEGQHAKIRRALTEAGVTAGSRVLEIGC 207

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G V     ++       GV +S + L+ A+     +G++   D    D+    +G FD
Sbjct: 208 GWGGVAEVAARDF-GAHVTGVTLSSEQLDYAQQRLRRHGLTSLGDLRFQDYRDIPDGPFD 266

Query: 167 VIVS 170
            ++S
Sbjct: 267 AVIS 270


>gi|300715112|ref|YP_003739915.1| ribosomal RNA small subunit methyltransferase D [Erwinia billingiae
           Eb661]
 gi|299060948|emb|CAX58055.1| ribosomal RNA small subunit methyltransferase D [Erwinia billingiae
           Eb661]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I DLG G G + L  L ++P  +   +D S  A+  ++ N  
Sbjct: 214 DVGARFFMANLPEGIEGEIADLGCGNGVIGLTALDQNPAAEVHFIDESWMAVASSEMNVE 273

Query: 143 TNGVS--ERFDT-LQSDWFSSVEGLFDVIVSNPPY 174
            N     +R    +           F  ++ NPP+
Sbjct: 274 VNRPDDLDRCHFSVNHSLAGFPSNTFHAVLCNPPF 308


>gi|269960813|ref|ZP_06175184.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834477|gb|EEZ88565.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 418

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++E +    ++++GTG GA+ + +  E    +     IS +    A+      G
Sbjct: 190 MDRLCQQLELKPTDHVVEIGTGWGAMAIYMA-EQYGCQVTTTTISEEQHAYAEQKIKERG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++   L+ D + ++ G +D +VS
Sbjct: 249 LEDKITLLKED-YRNLTGTYDKLVS 272


>gi|269967781|ref|ZP_06181828.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
           40B]
 gi|269827601|gb|EEZ81888.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
           40B]
          Length = 418

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++E +    ++++GTG GA+ + +  E    +     IS +    A+      G
Sbjct: 190 MDRLCQQLELKPTDHVVEIGTGWGAMAIYMA-EQYGCQVTTTTISEEQHAYAEQKIKERG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++   L+ D + ++ G +D +VS
Sbjct: 249 LEDKITLLKED-YRNLTGTYDKLVS 272


>gi|262372166|ref|ZP_06065445.1| ribosomal protein L11 methyltransferase [Acinetobacter junii SH205]
 gi|262312191|gb|EEY93276.1| ribosomal protein L11 methyltransferase [Acinetobacter junii SH205]
          Length = 301

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A L      K    DI  +A+   K NA  NGV ER      + F++
Sbjct: 163 VIDYGCGSGILGVAALLLGAK-KVYATDIDPQAVLATKQNAELNGVLERLYVGLPEEFNN 221

Query: 161 --VEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
                  D++V+N   I +  +  L  E   +   +   +L G
Sbjct: 222 EFKGQQSDILVAN---ILAAPLMALAPEFSTLIKNEGEFALAG 261


>gi|254672652|emb|CBA06466.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha275]
          Length = 262

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 129 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDG 187

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 188 L----PQGQFDVVVAN 199


>gi|226323301|ref|ZP_03798819.1| hypothetical protein COPCOM_01073 [Coprococcus comes ATCC 27758]
 gi|225208491|gb|EEG90845.1| hypothetical protein COPCOM_01073 [Coprococcus comes ATCC 27758]
          Length = 455

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   FY     ++  ++  +F    +T  L  +     +   I +     I DL +GT
Sbjct: 264 LYGQDYFYEELLGLKFKITPFSFF---QTNSLGAEVLYEAARSYIGETKDKVIFDLYSGT 320

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   L    P  K  VGV+I  +A+E AK NA  NG+ +       D       +  +
Sbjct: 321 GTIAQILA---PVAKKVVGVEIVEEAVEAAKENAALNGL-DNCTFWAGDVLKVIDDLGEV 376

Query: 165 FDVIVSNPP 173
            D+IV +PP
Sbjct: 377 PDLIVLDPP 385


>gi|91226042|ref|ZP_01260969.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
           12G01]
 gi|91189483|gb|EAS75760.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio alginolyticus
           12G01]
          Length = 418

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++E +    ++++GTG GA+ + +  E    +     IS +    A+      G
Sbjct: 190 MDRLCQQLELKPTDHVVEIGTGWGAMAIYMA-EQYGCQVTTTTISEEQHAYAEQKIKERG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + ++   L+ D + ++ G +D +VS
Sbjct: 249 LEDKITLLKED-YRNLTGTYDKLVS 272


>gi|83951020|ref|ZP_00959753.1| methyltransferase, putative [Roseovarius nubinhibens ISM]
 gi|83838919|gb|EAP78215.1| methyltransferase, putative [Roseovarius nubinhibens ISM]
          Length = 329

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 27/142 (19%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            ALA +LP    RD   + DLG G G +   +L+         V+    AL  A+ N   
Sbjct: 174 EALANALPAKLGRD---VADLGAGWGYLSSRILQIEGIETVHLVEAEHDALACARRNLDD 230

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
                +F    +  ++  +   D +V NPP+             R  +P +       G 
Sbjct: 231 --ARAQFHWQDARNWTP-DARLDAVVMNPPFHTG----------RTAEPEL-------GR 270

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              R      +R L   G   +
Sbjct: 271 DFIRA----AARLLKPSGQLWM 288


>gi|322616357|gb|EFY13266.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619607|gb|EFY16482.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622697|gb|EFY19542.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322628609|gb|EFY25396.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322631546|gb|EFY28302.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637073|gb|EFY33776.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641728|gb|EFY38364.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644479|gb|EFY41019.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650060|gb|EFY46477.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654147|gb|EFY50470.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658062|gb|EFY54329.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322663536|gb|EFY59738.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322670272|gb|EFY66412.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671508|gb|EFY67630.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676864|gb|EFY72931.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682789|gb|EFY78808.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686468|gb|EFY82450.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323196078|gb|EFZ81241.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323196776|gb|EFZ81920.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202945|gb|EFZ87979.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208985|gb|EFZ93922.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323209696|gb|EFZ94623.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215178|gb|EFZ99923.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323222381|gb|EGA06759.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227505|gb|EGA11665.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229856|gb|EGA13979.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323233081|gb|EGA17177.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240816|gb|EGA24858.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323243133|gb|EGA27153.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248675|gb|EGA32603.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251676|gb|EGA35543.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323257336|gb|EGA41034.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261924|gb|EGA45490.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267940|gb|EGA51419.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323271993|gb|EGA55408.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|315124649|ref|YP_004066653.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
 gi|315018371|gb|ADT66464.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
          Length = 312

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|318037603|ref|NP_001187732.1| methyltransferase-like protein 5 [Ictalurus punctatus]
 gi|308323827|gb|ADO29049.1| methyltransferase-like protein 5 [Ictalurus punctatus]
          Length = 207

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 5/99 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   AL+I K N   
Sbjct: 35  CMLYTIHNTFDDIENKLVADLGCGCGVLSIGAAVLDAGLCV-GFDIDSDALDIFKRNVEE 93

Query: 144 NGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVI 179
             +    D +Q D  S        FD ++ NPP+     
Sbjct: 94  FELP-NIDMVQCDICSIGPLYTKKFDTVIMNPPFGTKHD 131


>gi|306820250|ref|ZP_07453891.1| 23S rRNA (uracil-5-)-methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551704|gb|EFM39654.1| 23S rRNA (uracil-5-)-methyltransferase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 452

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I DL +GTG + ++L   +   K +G++I  +A+E+A+ NA  N V    + +  D    
Sbjct: 310 IFDLYSGTGTIGISLSARAK--KVIGIEIVEEAVEMARENAQANNVK-NVEFIAGDVKEE 366

Query: 161 VEGLFDV---IVSNPP 173
           V  L +    I+ +PP
Sbjct: 367 VSKLTNSPQLIILDPP 382


>gi|297538667|ref|YP_003674436.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylotenera sp.
           301]
 gi|297258014|gb|ADI29859.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylotenera sp.
           301]
          Length = 423

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 13/130 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L     +++ +    ++++GTG G   +         +     IS +  E+AK    
Sbjct: 184 ELKLKTICDKLDLKSTDHVVEIGTGWGGFAIYAATHY-GCRVTTTTISKQQYELAKVRVK 242

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG---G 199
             G+ ++   L  D +  + G FD +VS        +++ +G   R +D   +  G    
Sbjct: 243 AAGLEDKITLLLED-YRHLTGTFDKLVS------IEMIEAVGH--RFYDTYFAKVGSLLK 293

Query: 200 IDGLSHYRTI 209
            DGL+  + I
Sbjct: 294 ADGLALIQAI 303


>gi|284926407|gb|ADC28759.1| cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter jejuni
           subsp. jejuni IA3902]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|283956581|ref|ZP_06374060.1| LOW QUALITY PROTEIN: putative cyclopropane-fatty-acyl-phospholipid
           synthase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791830|gb|EFC30620.1| LOW QUALITY PROTEIN: putative cyclopropane-fatty-acyl-phospholipid
           synthase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|240949622|ref|ZP_04753957.1| hypothetical protein AM305_11750 [Actinobacillus minor NM305]
 gi|240295880|gb|EER46556.1| hypothetical protein AM305_11750 [Actinobacillus minor NM305]
          Length = 251

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 50/191 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A  + +   +     ++L++    G   + L K+    + +G+D+  +ALE A+ N   N
Sbjct: 26  ATDWLIANGDFNKNKKVLEVACNMGTTAIQLAKDY-GCQIIGIDLDEEALEKARENIKEN 84

Query: 145 GVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           GV E     +++       +  FD++      I   ++  L +E +              
Sbjct: 85  GVEELVQVQRANATKLPFDDNSFDIV------INEAMLTMLPMEAK-------------- 124

Query: 203 LSHYRTIADGVSRHLNKDGLCS----------VE-------------IGYNQKVDVVRIF 239
                       R L  +G             VE             +   +K D   +F
Sbjct: 125 ----EKAIREYLRVLKPNGFLLTHDVLLNTDDVESVINELREAIHLTVSPLKKEDWKALF 180

Query: 240 ESRKLFLVNAF 250
                  V+ +
Sbjct: 181 HRCGFRNVDTY 191


>gi|205356207|ref|ZP_03222973.1| putative cyclopropane fatty acyl phospholipid synthase
           [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345812|gb|EDZ32449.1| putative cyclopropane fatty acyl phospholipid synthase
           [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|168240762|ref|ZP_02665694.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194448777|ref|YP_002044912.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194407081|gb|ACF67300.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205340264|gb|EDZ27028.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|157415447|ref|YP_001482703.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386411|gb|ABV52726.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748089|gb|ADN91359.1| Cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter jejuni
           subsp. jejuni M1]
 gi|315932326|gb|EFV11269.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 327]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|123477096|ref|XP_001321717.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121904549|gb|EAY09494.1| hypothetical protein TVAG_102430 [Trichomonas vaginalis G3]
          Length = 217

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 79/189 (41%), Gaps = 14/189 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL--ALLKESPFFKGV--G 126
            ++P  +T  L D  ++    R     +  +L++G+G+G V    ++L +S     +   
Sbjct: 17  VYKPSSDTFFLCD-GISKLFDRFPPCPI--VLEIGSGSGYVTAYTSMLFKSKGLHSIHFT 73

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            DI+ +  +  K     NGVS   +  +  +     G  DV++ NPPY+E+   + L   
Sbjct: 74  TDINVECCKKTKQLCSENGVS--VNAFRDRFCEHFRGPIDVLIFNPPYVETPN-EELEDA 130

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRH---LNKDGLCSVEIGY-NQKVDVVRIFESR 242
           ++      S  GG DG        + +  H    + + +  + +   N+ + + R  ++ 
Sbjct: 131 IKKHSIEASWAGGEDGAVVIYDCLNFIVSHREKFSPNFIFILLLDAVNKPMKLKRFCKAH 190

Query: 243 KLFLVNAFK 251
            L L    K
Sbjct: 191 GLELKVIMK 199


>gi|148926188|ref|ZP_01809873.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845359|gb|EDK22452.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 391

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 154 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 212

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 213 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 252

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 253 YFMK-----VKQVLKPGGSMLL 269


>gi|218562795|ref|YP_002344574.1| cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|112360501|emb|CAL35298.1| cyclopropane-fatty-acyl-phospholipid synthase [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|315926602|gb|EFV05983.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|153949340|ref|YP_001399381.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|153997406|ref|ZP_02022506.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125]
 gi|161484913|ref|NP_667555.2| ribosomal protein L11 methyltransferase [Yersinia pestis KIM 10]
 gi|161511288|ref|NP_995159.2| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|166011411|ref|ZP_02232309.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167401975|ref|ZP_02307458.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|170022705|ref|YP_001719210.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|218930666|ref|YP_002348541.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92]
 gi|229836800|ref|ZP_04456965.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Pestoides A]
 gi|229839301|ref|ZP_04459460.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229899863|ref|ZP_04515004.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904174|ref|ZP_04519285.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Nepal516]
 gi|38605410|sp|Q8ZAX6|PRMA_YERPE RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|166989901|sp|A7FDQ3|PRMA_YERP3 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710129|sp|B1JKF2|PRMA_YERPY RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|115349277|emb|CAL22244.1| ribosomal protein L11 methyltransferase [Yersinia pestis CO92]
 gi|149289043|gb|EDM39123.1| ribosomal protein L11 methyltransferase [Yersinia pestis CA88-4125]
 gi|152960835|gb|ABS48296.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 31758]
 gi|165989795|gb|EDR42096.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167048561|gb|EDR59969.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|169749239|gb|ACA66757.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis YPIII]
 gi|229678292|gb|EEO74397.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Nepal516]
 gi|229687355|gb|EEO79430.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695667|gb|EEO85714.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705743|gb|EEO91752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           Pestoides A]
 gi|262363312|gb|ACY60033.1| ribosomal protein L11 methyltransferase [Yersinia pestis D106004]
 gi|320017180|gb|ADW00752.1| methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 293

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 158 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 216

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 217 -DQPAELSADVVVAN 230


>gi|121612108|ref|YP_001000858.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|167005770|ref|ZP_02271528.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249076|gb|EAQ72037.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|86152995|ref|ZP_01071200.1| cyclopropane fatty acid synthase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843880|gb|EAQ61090.1| cyclopropane fatty acid synthase [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|86150875|ref|ZP_01069091.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85842045|gb|EAQ59291.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|86150286|ref|ZP_01068512.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|153951326|ref|YP_001397721.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|85839111|gb|EAQ56374.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|152938772|gb|ABS43513.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Campylobacter jejuni subsp. doylei 269.97]
 gi|315929214|gb|EFV08435.1| cyclopropane-fatty-acyl-phospholipid synthase family protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|86133826|ref|ZP_01052408.1| SAM-dependent methyltransferase [Polaribacter sp. MED152]
 gi|85820689|gb|EAQ41836.1| SAM-dependent methyltransferase [Polaribacter sp. MED152]
          Length = 284

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +      +     ++ILD+GTG   +   L      +  V  DI   AL+ A+ N   N 
Sbjct: 85  IHHLSDLLGNEKNIKILDIGTGATCIYPLLGVAEYNWSFVATDIDLDALDTAQDNIDDNN 144

Query: 146 VSERFDTLQSDWFSSV-------EGLFDVIVSNPPYIESVI 179
            ++  +  Q      +       +  F   + NPP+ +S  
Sbjct: 145 FTDNIELRQQFKEEHILKDILEDDDSFSATMCNPPFYKSAE 185


>gi|57238055|ref|YP_179304.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni RM1221]
 gi|88596339|ref|ZP_01099576.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|57166859|gb|AAW35638.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni RM1221]
 gi|88191180|gb|EAQ95152.1| cyclopropane-fatty-acyl-phospholipid synthase, putative
           [Campylobacter jejuni subsp. jejuni 84-25]
 gi|315058615|gb|ADT72944.1| Putative cyclopropane-fatty-acyl-phospholipid synthase
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 387

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 28/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L +++ ++  ++LD+G G G + +   ++    K VG+ IS +  + AK      G
Sbjct: 150 IEHTLKKLDLKEGEKLLDIGCGWGWLSIMAAQKY-GVKVVGITISEEQCKKAKERVKELG 208

Query: 146 VSERFDT-LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GL 203
           + ++ +  LQ+      E  FD +VS                V  F+      G  + GL
Sbjct: 209 LEDKIEIRLQNYQDLEFENYFDKVVS----------------VGMFE----HVGKENLGL 248

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
              +     V + L   G   +
Sbjct: 249 YFMK-----VKQVLKPGGSMLL 265


>gi|312136784|ref|YP_004004121.1| methyltransferase type 11 [Methanothermus fervidus DSM 2088]
 gi|311224503|gb|ADP77359.1| Methyltransferase type 11 [Methanothermus fervidus DSM 2088]
          Length = 260

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 66  TLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                  +   E + L D+        + + D + +LD+GTGTG + + L +        
Sbjct: 17  IFDESVVQRELEKKWLFDAWKNLLKKVLPEEDNLSVLDIGTGTGFLAIVLAEL--GHSVT 74

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVS 170
            +D+S + L IAK  A+  G++  F    +   S V    FDV++S
Sbjct: 75  AIDVSSRMLNIAKKRAIQRGLNINFKLEDAMNLSDVYSEDFDVVIS 120


>gi|220912884|ref|YP_002488193.1| cyclopropane-fatty-acyl-phospholipid synthase [Arthrobacter
           chlorophenolicus A6]
 gi|219859762|gb|ACL40104.1| Cyclopropane-fatty-acyl-phospholipid synthase [Arthrobacter
           chlorophenolicus A6]
          Length = 457

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     ++  +  +R+LD+G G G+  L    E      +GV +S +   +A+  A 
Sbjct: 216 EAKLDLVCRKLGLKPGMRVLDVGCGWGSFALH-AAEKYGVTVLGVTLSAEQANLARKRAA 274

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G++E+ +    D+    +G FD I S
Sbjct: 275 EAGLTEKVEIRVQDYRDVADGPFDAISS 302


>gi|157377249|ref|YP_001475849.1| ribosomal protein L11 methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|189037705|sp|A8G0U8|PRMA_SHESH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|157319623|gb|ABV38721.1| ribosomal protein L11 methyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 293

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 16/152 (10%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D     ++D G 
Sbjct: 108 FGERLWICPSWREIPDPDAVNIILDPGLAFGTGTHPTTALCLEWLDSLDFADKEVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    K  G+DI  +A++ +K+NA  NGV ++      +     +   D
Sbjct: 168 GSGILAVA-ALKLGATKVTGIDIDYQAIDASKANAERNGVEDQLALFLPE-DQPKDLQAD 225

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
           ++V+N        +  L  E      +++L G
Sbjct: 226 ILVANILAGPLRELAPLIAEKVKTGGQLALSG 257


>gi|22299491|ref|NP_682738.1| hypothetical protein tlr1948 [Thermosynechococcus elongatus BP-1]
 gi|22295674|dbj|BAC09500.1| tlr1948 [Thermosynechococcus elongatus BP-1]
          Length = 396

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 27/141 (19%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +A +F   R   +  V ILD G GTG     L   +P  K   +D+S  AL IA      
Sbjct: 41  AAYSFCTGRYPSQLDVAILDAGCGTGVGTEYLAHLNPQAKITALDLSEAALAIACERCRR 100

Query: 144 NGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           +G  + +F  L  +  + +   F +I          ++  L       +P          
Sbjct: 101 SGATNVQFHHLSLEEVAQLGQTFQMINCV------GVLHHLP------EP---------- 138

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
               +     ++  L   G+ 
Sbjct: 139 ----QRGIQALADVLAPGGIV 155


>gi|325922746|ref|ZP_08184481.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas gardneri
           ATCC 19865]
 gi|325546772|gb|EGD17891.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas gardneri
           ATCC 19865]
          Length = 431

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  ++A       G
Sbjct: 188 LERICQKLRLGPQHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFDLATQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +++R   L  D +  ++G +D +VS
Sbjct: 247 LNDRVTVLLRD-YRDLDGRYDRVVS 270


>gi|282900616|ref|ZP_06308558.1| 23S rRNA methyltransferase/RumA [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194416|gb|EFA69371.1| 23S rRNA methyltransferase/RumA [Cylindrospermopsis raciborskii
           CS-505]
          Length = 455

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +  DTF          ++ L     ++  +    ++D   G G + L L K++
Sbjct: 276 FAGLEFKVRPDTFF--QVYTETAEALLEVIQSQLNLQGDEILVDAYCGIGTLTLPLAKQA 333

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPP 173
              + +G++I   A+E A  NA  NG++    +   ++ D    ++ L D+++ +PP
Sbjct: 334 R--QTIGLEIQPAAVEQAIYNAQHNGITNAKFQIGAVE-DILPKLDTLPDIVLLDPP 387


>gi|238019497|ref|ZP_04599923.1| hypothetical protein VEIDISOL_01366 [Veillonella dispar ATCC 17748]
 gi|237864196|gb|EEP65486.1| hypothetical protein VEIDISOL_01366 [Veillonella dispar ATCC 17748]
          Length = 495

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D ALA++    + +    ++D   GTG + L L  ++
Sbjct: 311 DLRFTLSPHSFFQVNPEQTTVLYDQALAYA----DLKGDETVIDAYCGTGTISLFLAHKA 366

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 367 K--HVIGIEIVEPAIINARENAQRNGY-DNTEFIVADAAVEMPKLYKAGVRPDVIVFDP- 422

Query: 174 YIESVIVDCLGLEVRDFDPR 193
            I +   + +       +P+
Sbjct: 423 -IRAGCKEEVLTSAAGMEPK 441


>gi|220907156|ref|YP_002482467.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219863767|gb|ACL44106.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 283

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 26/150 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L  +L    +    R+LDLG GTG+  L L +  P  + +G+D+S   L +    A 
Sbjct: 86  ETLLRQTLVSKIQGQPRRMLDLGCGTGSTTLLLKQAFPQTEVIGLDLSPYMLFMGDRKAT 145

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-PRISLDGGID 201
             G+  +F  +Q D   +                S   D +   +   + P  +      
Sbjct: 146 AAGLEIQF--IQGDATQTG-------------FPSASFDVVTATLLFHETPPEA------ 184

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
                  I     R L   G   +  G  Q
Sbjct: 185 ----AAKILREAFRLLTPGGQILILDGNQQ 210


>gi|114773258|ref|ZP_01450493.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [alpha proteobacterium HTCC2255]
 gi|114546377|gb|EAU49286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein
           L11 methyltransferase) [alpha proteobacterium HTCC2255]
          Length = 292

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTF-EPRPE-------------TELLVDSALAFSLPRIEKRDVVRILDLGT 106
           +  RL +       P P+             T     +AL             ++LD G 
Sbjct: 108 FGERLWVCPSWREIPEPDAVNVMLDPGLAFGTGTHATTALCLRWLDSLSLSGAKVLDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +      +G+DI  +AL+  ++NA  NGV+++            + L D
Sbjct: 168 GSGILGIA-ALKLGAADMLGIDIDPQALQATEANAQRNGVADKLTLALPK--DDTQYLAD 224

Query: 167 VIVSN 171
           ++ +N
Sbjct: 225 IVCAN 229


>gi|313618887|gb|EFR90753.1| ribosomal protein L11 methyltransferase [Listeria innocua FSL
           S4-378]
          Length = 314

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 58/222 (26%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETE------LLVDSALAFSLPRIEKR------------ 96
             W+ +Y+        T  P  E+       ++++     +                   
Sbjct: 112 TAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPTTQLCIRALSDY 171

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                 ++D+GTG+G + +A  K       +  D+   A   A+ N   N         Q
Sbjct: 172 LQPGDELIDVGTGSGVLSIASAKLGAKS-ILATDLDEVATRAAEENIRLNKTENIITVKQ 230

Query: 155 SDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++          D++V+N        V  L  E                   Y+      
Sbjct: 231 NNLLXXXNKSDVDIVVAN----ILAEVILLFPE-----------------DVYKA----- 264

Query: 214 SRHLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              L   G+      +E   ++   V    ++  L +    +
Sbjct: 265 ---LKPGGIFIASGIIE---DKAKVVEEALKNAGLIIEKIEQ 300


>gi|288958238|ref|YP_003448579.1| rRNA (guanine-N2-)-methyltransferase [Azospirillum sp. B510]
 gi|288910546|dbj|BAI72035.1| rRNA (guanine-N2-)-methyltransferase [Azospirillum sp. B510]
          Length = 340

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 52/150 (34%), Gaps = 21/150 (14%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRI-----EKRDVVRILDLGTGTGAV 111
                +V LTLS  T E      L     L      +     E     R+LD G G G +
Sbjct: 156 EEWRRSVSLTLSDRTLELVSYPGLFAHGHLDAGTECLLNVLPEVAAGTRVLDFGCGAGVI 215

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIV 169
             A+ +  P      +DI   AL  A+ N          + + SD  + +     F +I+
Sbjct: 216 ARAVRERQPDAPLTLLDIDAVALHAARQNV------PDAELVLSDGLAGLGSRERFGLIL 269

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           SNPP       D   L+        +L  G
Sbjct: 270 SNPPLHRGKDEDFGMLD--------ALVAG 291


>gi|125717602|ref|YP_001034735.1| hypothetical protein SSA_0752 [Streptococcus sanguinis SK36]
 gi|125497519|gb|ABN44185.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 227

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 13/123 (10%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++  +    +S  V  L   ++  +P        DGL     +
Sbjct: 124 LEGDAVDLLETLEDSYDLVFMDS--AKSKYVVFLPQVLKRLNP--------DGLILIDDV 173

Query: 210 ADG 212
             G
Sbjct: 174 FQG 176


>gi|159045610|ref|YP_001534404.1| type 11 methyltransferase [Dinoroseobacter shibae DFL 12]
 gi|157913370|gb|ABV94803.1| methyltransferase type 11 [Dinoroseobacter shibae DFL 12]
          Length = 256

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RL L       R  T+ ++ +A       +  R     LDLG G GA  L L+  +
Sbjct: 13  FLGGRLVLEQPVQGYRAGTDPVLLAA------SVPARAGQSCLDLGCGVGAAALCLMVRT 66

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL-FDVIVSNPPYIES 177
                 GV++      +A++NA  N +  E  +   +D    +    FD +  NPPY  +
Sbjct: 67  GAA-CTGVELQPGYAALARANASRNDLPLEVIEGDATDLPPDLRQRSFDHVFFNPPYFAA 125

Query: 178 V 178
            
Sbjct: 126 E 126


>gi|49088732|gb|AAT51600.1| PA4617 [synthetic construct]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELALVDESYMAVQSARENWRAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|37526884|ref|NP_930228.1| cobalt-precorrin-6Y C(15)-methyltransferase [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786317|emb|CAE15368.1| Precorrin-8W decarboxylase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 189

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A +L R+E     +++D+G GTG+V L      P      ++ +  AL + + N  
Sbjct: 17  EPVRALALERLELNGASQLIDVGAGTGSVALEAALCFPALTVTAIERNPAALALIEENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G     + +  +   +++ + D +                             GG  G
Sbjct: 77  RLGC-HNVEIIAGEAPLALDVMADAV---------------------------FIGGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
                 + D    H+   G   +
Sbjct: 109 --QLTALIDWALDHMYPGGRLVL 129


>gi|260466966|ref|ZP_05813148.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium
           opportunistum WSM2075]
 gi|259029263|gb|EEW30557.1| Cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium
           opportunistum WSM2075]
          Length = 430

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 50/138 (36%), Gaps = 26/138 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +    +LD+G+G G + L L K        GV +S +   +A   A   G+ 
Sbjct: 165 HIAAKLRLKAGQTVLDIGSGWGGLGLYLAKAF-DVDVQGVTLSTEQHGVATDRAHAQGLE 223

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                   D +  +   FD IVS                V  F+          G++HYR
Sbjct: 224 NHVHFELKD-YRELNERFDRIVS----------------VGMFE--------HVGVNHYR 258

Query: 208 TIADGVSRHLNKDGLCSV 225
           T  D  +  L  DG+  +
Sbjct: 259 TFFDKSATLLKPDGVMLL 276


>gi|237736824|ref|ZP_04567305.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
 gi|229420686|gb|EEO35733.1| methyltransferase [Fusobacterium mortiferum ATCC 9817]
          Length = 393

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 24/136 (17%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R LD+ + +G   +A LKE+   K V +D    ALE+ + N   NG    + T++ 
Sbjct: 215 NKDTRFLDVFSSSGGFSMAALKENCK-KVVAIDKEPHALELCRENYELNGFEGNYTTMEG 273

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D F  ++        +DVI  +PP +     D                    G   +  +
Sbjct: 274 DAFLLLKTLVGRGEKYDVITLDPPSLIKRKADI-----------------HKGRDFFFDL 316

Query: 210 ADGVSRHLNKDGLCSV 225
            D   + L   G+  V
Sbjct: 317 CDDSFKLLEDGGILGV 332


>gi|239825905|ref|YP_002948529.1| RNA methyltransferase, TrmA family [Geobacillus sp. WCH70]
 gi|239806198|gb|ACS23263.1| RNA methyltransferase, TrmA family [Geobacillus sp. WCH70]
          Length = 459

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 17/130 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             I  +    +++  +S+ +F      +T++L + AL ++    +      ++D   G G
Sbjct: 269 EYIYDY--IGDIKFAISARSFYQVNPEQTKVLYEKALEYA----QLTGKETVIDAYCGIG 322

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEG 163
            + L L K++   K  GV++  +A+E AK NA  NG++         + +   W+     
Sbjct: 323 TISLFLAKKAK--KVYGVEVVPEAIEDAKRNAELNGITNVEFAIGEAEAVIPKWYEQ-GI 379

Query: 164 LFDVIVSNPP 173
             D IV +PP
Sbjct: 380 RADCIVVDPP 389


>gi|94501527|ref|ZP_01308045.1| cyclopropane-fatty-acyl-phospholipid synthase [Oceanobacter sp.
           RED65]
 gi|94426345|gb|EAT11335.1| cyclopropane-fatty-acyl-phospholipid synthase [Oceanobacter sp.
           RED65]
          Length = 420

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     R+       ++++GTG G   +   K     K     IS +   +AK     +G
Sbjct: 185 LKTICERLHLTADDHVVEIGTGWGGFAVYAAKNY-GCKVTTTTISEEQYNLAKERIKEHG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  +   L+ D +  +EG +D +VS
Sbjct: 244 LEGQITLLKED-YRKLEGTYDKLVS 267


>gi|148236727|ref|NP_001085693.1| trimethylguanosine synthase 1 [Xenopus laevis]
 gi|49119211|gb|AAH73206.1| MGC80481 protein [Xenopus laevis]
          Length = 837

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 72/177 (40%), Gaps = 20/177 (11%)

Query: 83  DSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +        R+ +  D   ++D   G G   +   K     + + VDI    L+ A++NA
Sbjct: 664 EKIAEHIASRVRQSCDCGLVVDAFCGVGGNAIQFAKAGN--RVIAVDIDPAKLDFARNNA 721

Query: 142 VTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
              GV+++ + +  D+   +     D I  +PP+     V     ++R     + L    
Sbjct: 722 EVYGVTDQIEFILGDFMVLAPALKADAIFLSPPWGGPDYVSAETFDIRT----MCL---- 773

Query: 201 DGLSHYRT-------IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           DG   +R        I   + R+ + + + S+  G   +V++ + F ++KL  +  +
Sbjct: 774 DGFEVFRLSKQITKNIIYFLPRNTDVEQVVSL-AGPGGQVEIEQNFLNKKLKTMTVY 829


>gi|325207478|gb|ADZ02930.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           NZ-05/33]
          Length = 330

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 197 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDG 255

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 256 L----PQGQFDVVVAN 267


>gi|326315445|ref|YP_004233117.1| adenine-specific DNA-methyltransferase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372281|gb|ADX44550.1| Site-specific DNA-methyltransferase (adenine-specific) [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 522

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V+  L +   R +++ +VR++D G G+G   LA L+  P  + V  ++      I ++N
Sbjct: 76  VVEGMLTWV--RRQRKSIVRLVDPGAGSGRFTLAALRMYPKAEAVAAEMDPTVALILRAN 133

Query: 141 AVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
            V  G ++R +    D+      +V+G   + + NPPY+    +D    E
Sbjct: 134 LVAMGFADRTEVRVGDFRDLKLPAVKGT-TLFIGNPPYVRHHDIDAAWKE 182


>gi|308321777|gb|ADO28031.1| methyltransferase-like protein 5 [Ictalurus furcatus]
          Length = 207

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   AL+I K N   
Sbjct: 35  CMLYTIHNTFDDIENKLVADLGCGCGVLSIGAAVLDAGLCV-GFDIDSDALDIFKRNVEE 93

Query: 144 NGVSERFDTLQSDWF---SSVEGLFDVIVSNPPY 174
             +    D +Q D     S     FD ++ NPP+
Sbjct: 94  FELP-NIDMVQCDICSIGSLYTKKFDTVIMNPPF 126


>gi|257869135|ref|ZP_05648788.1| RNA methyltransferase [Enterococcus gallinarum EG2]
 gi|257803299|gb|EEV32121.1| RNA methyltransferase [Enterococcus gallinarum EG2]
          Length = 458

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 17/120 (14%)

Query: 63  VRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +   LS   F    P+ +T +L D A+      +       ++D   G G + L+L K +
Sbjct: 280 LTFDLSPRAFFQLNPQ-QTSILYDEAIK----ALALTKNETVVDAYCGVGTIGLSLAKHA 334

Query: 120 PFFKGVGVDISCKALEIAKSNAVT------NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
              +  G+DI  +A+E AK NA        +  +   + L   WF++     D IV +PP
Sbjct: 335 K--EVRGMDIIPQAIENAKENARRIQANNTHYETGTAEDLLPKWFAA-GFRPDSIVVDPP 391


>gi|254804314|ref|YP_003082535.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha14]
 gi|254667856|emb|CBA03901.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha14]
          Length = 330

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 197 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDG 255

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 256 L----PQGQFDVVVAN 267


>gi|87199299|ref|YP_496556.1| putative methyltransferase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134980|gb|ABD25722.1| putative methyltransferase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 275

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  I      R++D+G G G V LA+ +  P  + +GVD+S   ++ A+  A       
Sbjct: 33  LLNAIAAEPGRRVVDIGCGAGEVSLAVARARPQAQVIGVDVSPDLVDAARGRAGALPNLS 92

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
            F+   +  ++S +G  D+ VS
Sbjct: 93  -FELADASSWTSPQGAPDLYVS 113


>gi|6572627|gb|AAF17328.1|AF139346_1 microcystin synthetase [Microcystis sp. UWOCC BauldE]
          Length = 440

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 87/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDSV-LDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKEQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  ++   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADKFEGLKSEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|7416806|dbj|BAA94055.1| Mg-protoporphyrin IX methyl transferase [Rubrivivax gelatinosus]
          Length = 233

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G GTGA  + L +     + V +D+S   +  A+     +      D    D   
Sbjct: 64  RVLDAGCGTGAASIELARR--GAEVVAIDLSPTLVGYARERLPESLGPGSIDFRSGDMLD 121

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-----------PRISL 196
              G FD +++    I     D +    R  +           PR +L
Sbjct: 122 PALGRFDHVIAMDSVIHYDAPDAVAALSRLAERTSTSMVFTFAPRTAL 169


>gi|328717362|ref|XP_003246183.1| PREDICTED: hypothetical protein LOC100573105 [Acyrthosiphon pisum]
          Length = 592

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +    +   V   +D   G G   + L +     K + VDI    + +AK NA   GV 
Sbjct: 208 CAYMAEQCGRVKVAVDPFCGAGGNVIHLARRFD--KVIAVDIDADKIIMAKQNAAIYGVG 265

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPY 174
           ++ + +  D+F    +   DVIV++PP+
Sbjct: 266 DKIEFIVGDYFKLENQIKGDVIVTSPPW 293


>gi|297155053|gb|ADI04765.1| hypothetical protein SBI_01644 [Streptomyces bingchenggensis BCW-1]
          Length = 257

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 61/181 (33%), Gaps = 35/181 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D A+   L     R   R+LDLG G G   L  L   P     G+DIS  AL  A++ A 
Sbjct: 34  DDAVRRLLEVGLPRGDERVLDLGCGGGEWLLRALSAQPKVHAEGIDISEPALVDARAAAE 93

Query: 143 TNGVSERFDTLQ--SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             GV++R    Q  +D FSS    FD+++S                           G  
Sbjct: 94  RLGVADRLVLHQQEADGFSS-RHSFDLVLS--------------------------VGAA 126

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG-GNDRV 259
                         RHL   G   +  GY ++       E    F      D     DRV
Sbjct: 127 HAFGGVLPTLAAARRHLAPGGRVLIGDGYWEREPSPEAVEMLGDFD-----DLATTVDRV 181

Query: 260 L 260
           +
Sbjct: 182 V 182


>gi|219851150|ref|YP_002465582.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
 gi|219545409|gb|ACL15859.1| Methyltransferase type 11 [Methanosphaerula palustris E1-9c]
          Length = 268

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 32/133 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +L+ G G GA  + L + SP      VDIS  +L+ A+      G++      Q D F  
Sbjct: 41  VLEAGCGIGAQTVILARNSPDALITSVDISEASLKQAQETIQHAGIT-NVTFRQGDIF-- 97

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIADGVSRHLN 218
                     + P+  +         V +   +P+        GL   R +       L 
Sbjct: 98  ----------HLPFKPATFDHIFVCFVLEHLTEPQQ-------GLERLRPL-------LK 133

Query: 219 KDGLC-SVE--IG 228
           + G    +E   G
Sbjct: 134 EGGTLTVIEGDHG 146


>gi|319898330|ref|YP_004158423.1| ribosomal RNA small subunit methyltransferase C [Bartonella
           clarridgeiae 73]
 gi|319402294|emb|CBI75833.1| ribosomal RNA small subunit methyltransferase C [Bartonella
           clarridgeiae 73]
          Length = 332

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 38/184 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK---ALEIAK 138
           +D   A  +P I+K    +  D G G G +    LK S       +D+      ALE AK
Sbjct: 173 IDPGSAALVPYIQKVISGKTADFGAGWGFLSYTALKVSKNL--TTLDLYEADYNALETAK 230

Query: 139 SNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            N      S        D     ++ L+D I+SNPP+      D                
Sbjct: 231 KNMKHITTSIPISFYWHDLVCEPIKNLYDTIISNPPFHTQKATDISLG------------ 278

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIF-------ESRKLFLV 247
                    +      +++L   G   + +       +  + ++F       E     ++
Sbjct: 279 ---------KHFITNAAKYLKPKGHFLL-VANRHLPYEKLLKKLFRTVFIHEEVHGFKII 328

Query: 248 NAFK 251
            A +
Sbjct: 329 EARR 332


>gi|294624625|ref|ZP_06703297.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292601060|gb|EFF45125.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 355

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 58/200 (29%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L      K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARC--SK 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLAAHYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLMLVANRHLPYEQVLNDS 329

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L+ A +
Sbjct: 330 FGQVRVAAERDGFKLIAAIR 349


>gi|227875296|ref|ZP_03993438.1| methyltransferase (methylase) [Mobiluncus mulieris ATCC 35243]
 gi|227844201|gb|EEJ54368.1| methyltransferase (methylase) [Mobiluncus mulieris ATCC 35243]
          Length = 187

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 62/163 (38%), Gaps = 36/163 (22%)

Query: 73  EPRP---ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVD 128
            PR     T   V  A+   L         R+LD+  G+GA+ L AL + +     V   
Sbjct: 16  VPRSGTRPTSERVREAIFSRLDSQGVIAGARVLDIFAGSGALGLEALSRGATDAMLVDS- 74

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEG---LFDVIVSNPPYIESVIVDCL 183
            +  A+++ ++NA      ER   + +D   F++  G    FD++  +PPY         
Sbjct: 75  -ARGAVQVLRANAAALSAGERVQVVGADAVRFAASLGANERFDLVFIDPPY--------- 124

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
                      +LD G         +   V+ HL   G+  +E
Sbjct: 125 -----------TLDSG-----ILDQVLSSVATHLAPAGIIILE 151


>gi|114568822|ref|YP_755502.1| cyclopropane-fatty-acyl-phospholipid synthase [Maricaulis maris
           MCS10]
 gi|114339284|gb|ABI64564.1| Cyclopropane-fatty-acyl-phospholipid synthase [Maricaulis maris
           MCS10]
          Length = 413

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 8/133 (6%)

Query: 44  RSLKHESI--HRILGWRDFYN---VRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
           R     +I  H  LG   + +     +T SS  FE   E+  +  +        R+  + 
Sbjct: 133 RRGSRRNIAYHYDLGNAFYRHWLDESMTYSSALFETDDESLEIAQTRKYRRICERLGLKP 192

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+L++G G G       +E       G+ +S   L+ A+       +++R D    D 
Sbjct: 193 GDRVLEIGCGWGGFAEVAAREF-GCHVTGLTLSVAQLDYARGRLEAANLADRVDFRLQD- 250

Query: 158 FSSVEGLFDVIVS 170
           +  V   FD I S
Sbjct: 251 YRDVNETFDAIAS 263


>gi|70732666|ref|YP_262429.1| nucleotide methyltransferase [Pseudomonas fluorescens Pf-5]
 gi|123652786|sp|Q4K5Q4|RLMG_PSEF5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|68346965|gb|AAY94571.1| nucleotide methyltransferase, putative [Pseudomonas fluorescens
           Pf-5]
          Length = 374

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 23/138 (16%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +     R+ DLG G G + +A   ++P      VD S  A++ A+ N        
Sbjct: 223 LPHLPQNLGSARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSARENWQAVLGER 282

Query: 149 RFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D  +       +V++ NPP+ +  +V                     G     
Sbjct: 283 EAQMRAGDGLAGQAAQSLEVVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSV 225
            +       L   G   +
Sbjct: 322 RMFQQAREALVVGGALYI 339


>gi|121606279|ref|YP_983608.1| ribosomal protein L11 methyltransferase [Polaromonas
           naphthalenivorans CJ2]
 gi|120595248|gb|ABM38687.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Polaromonas naphthalenivorans CJ2]
          Length = 297

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             + + R+LD G G+G + +   K         VDI   A+E  ++NA  N V      L
Sbjct: 164 SGQSLGRVLDYGCGSGILAIGAAKFGAVA-IDAVDIDEAAVESTRANAQANHVQ-----L 217

Query: 154 QSDWFSSVEGLFDVIVSN 171
           Q+       G +  +++N
Sbjct: 218 QTGLPDKAVGRYQTVLAN 235


>gi|317143466|ref|XP_001819496.2| TAM domain methyltransferase [Aspergillus oryzae RIB40]
          Length = 402

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 41/145 (28%), Gaps = 31/145 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              L+       L         RILD+GTG+G   + +    P  + +G D+S       
Sbjct: 133 QHHLIKMVNGGRLFFAPLEHPKRILDIGTGSGIWPIEMAPIFPEAEIIGTDLSP------ 186

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
                 N V E    L  D         D  +  P + + +    +   +  F       
Sbjct: 187 ---VQPNEVPENVHFLVDDATE------DEWLWGPDHFDLIHTGHMSGSLPSF------- 230

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGL 222
                    + +      HL   G 
Sbjct: 231 ---------KELLRKALNHLKPGGY 246


>gi|317028302|ref|XP_003188636.1| methyltransferase [Aspergillus niger CBS 513.88]
          Length = 248

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 39/140 (27%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV--S 147
           L R   ++  R+LD+GTGTG   +    E P  + +G D+S             + +  +
Sbjct: 7   LNRAPIKNPARVLDIGTGTGIWAIDYADEHPEAEVIGNDLSP---------IQPSWIPPN 57

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
            RF+    +   S    FD       YI    ++    +V                    
Sbjct: 58  CRFEVDDFEQPWSYSKPFD-------YIHGRELEGCVRDV-------------------D 91

Query: 208 TIADGVSRHLNKDGLCSVEI 227
            +      +L   G   +EI
Sbjct: 92  NLFRQALENLKPGGW--MEI 109


>gi|294667290|ref|ZP_06732510.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292602962|gb|EFF46393.1| ribosomal RNA small subunit methyltransferase C [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 355

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 58/200 (29%), Gaps = 36/200 (18%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       +D A A  +  +         DLG G G +   +L      K
Sbjct: 172 KILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARC--SK 229

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL +A+ N        +      D  + +   +D IVSNPP+      
Sbjct: 230 VTALDLYEAEARALTLARRNLQDIAHPAQLHYHWRDVTAGLAAHYDFIVSNPPFHTPSRA 289

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV----EIGYNQKV--- 233
           D                         +      ++ L   G   +     + Y Q +   
Sbjct: 290 DRP--------------------DIGQRFIAVAAQALRPGGQLMLVANRHLPYEQVLNDS 329

Query: 234 --DVVRIFESRKLFLVNAFK 251
              V    E     L+ A +
Sbjct: 330 FGQVRVAAERDGFKLIAAIR 349


>gi|291537472|emb|CBL10584.1| 23S rRNA m(5)U-1939 methyltransferase [Roseburia intestinalis
           M50/1]
          Length = 473

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 57  WRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           + +   ++  ++  +F        E+L  +A  F    ++      + DL +GTG +   
Sbjct: 282 YEELLGLKFKITPFSFFQTNSLGAEVLYQTAREFIGDALDDEANQTVFDLYSGTGTIAQI 341

Query: 115 LLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVS 170
           L   SP  K  +GV+I  +A+  A+ NA  NG++   + +  D      ++    D IV 
Sbjct: 342 L---SPVAKKVIGVEIVEEAVVAARENAALNGLT-NCEFIAGDVLKVIDTIGEKPDYIVL 397

Query: 171 NPP 173
           +PP
Sbjct: 398 DPP 400


>gi|153006006|ref|YP_001380331.1| ribosomal L11 methyltransferase [Anaeromyxobacter sp. Fw109-5]
 gi|152029579|gb|ABS27347.1| ribosomal L11 methyltransferase [Anaeromyxobacter sp. Fw109-5]
          Length = 193

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +     +R+LDLG+G+G + +A L+         VD++  A+  A+ N   NG +ER
Sbjct: 49  LAAVAPLTGLRVLDLGSGSGILGIAALRLGAAGAV-CVDVNPDAVASARRNGAANGAAER 107

Query: 150 FDTLQSDWFSSVEGLFDVIVSN 171
            +   +         FD++V+N
Sbjct: 108 LEHRCASAGDLAGERFDLVVAN 129


>gi|108563317|ref|YP_627633.1| adenine specific DNA methyltransferase [Helicobacter pylori HPAG1]
 gi|107837090|gb|ABF84959.1| adenine specific DNA methyltransferase [Helicobacter pylori HPAG1]
          Length = 383

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K +   +L+   G G    + LK    
Sbjct: 7   NLDIKTLGQVFTPKK----IVDFMLTL------KHNHGSVLEPSAGDG----SFLKRFKK 52

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 53  A--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 96

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 97  APSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|83767355|dbj|BAE57494.1| unnamed protein product [Aspergillus oryzae]
          Length = 321

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 41/145 (28%), Gaps = 31/145 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              L+       L         RILD+GTG+G   + +    P  + +G D+S       
Sbjct: 52  QHHLIKMVNGGRLFFAPLEHPKRILDIGTGSGIWPIEMAPIFPEAEIIGTDLSP------ 105

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
                 N V E    L  D         D  +  P + + +    +   +  F       
Sbjct: 106 ---VQPNEVPENVHFLVDDATE------DEWLWGPDHFDLIHTGHMSGSLPSF------- 149

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGL 222
                    + +      HL   G 
Sbjct: 150 ---------KELLRKALNHLKPGGY 165


>gi|146276866|ref|YP_001167025.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555107|gb|ABP69720.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 403

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            ++ K+ + H  LG  DFY + L    T SS  F    E+      A  A  + RI  + 
Sbjct: 128 RQARKNIAAHYDLGN-DFYELWLDESMTYSSALFRTGQESLEEAQRAKYASMVDRIGAKP 186

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       KE    +  G+ IS    + A       G+S+R +    D+
Sbjct: 187 GDHVLEIGCGWGGFAEYAAKER-GLRVTGLTISRAQHDYAARRIARAGLSDRVEIRLQDY 245

Query: 158 FSSVEGLFDVIVS 170
                G FD I S
Sbjct: 246 RDE-RGTFDGIAS 257


>gi|15599813|ref|NP_253307.1| hypothetical protein PA4617 [Pseudomonas aeruginosa PAO1]
 gi|107099719|ref|ZP_01363637.1| hypothetical protein PaerPA_01000737 [Pseudomonas aeruginosa PACS2]
 gi|254238641|ref|ZP_04931964.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|81856977|sp|Q9HVH4|RLMG_PSEAE RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|9950868|gb|AAG08005.1|AE004875_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126170572|gb|EAZ56083.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 374

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELALVDESYMAVQSARENWRAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|253580204|ref|ZP_04857471.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848723|gb|EES76686.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 454

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 13/129 (10%)

Query: 53  RILGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           RIL  +DF+      +R  +S  TF       L  +   +     I       + DL +G
Sbjct: 262 RILYGQDFFYETLLGLRFKIS--TFSFFQPNSLAAEVLYSIVREYIGDTKDKVVFDLYSG 319

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGL 164
           TG +   L       + +GV+I  +A+E AK NA  N +S     +  D       +   
Sbjct: 320 TGTIA-QLAASVAD-EVIGVEIVEEAVEAAKQNAALNNLS-NCKFIVGDVLKVLDDLTEK 376

Query: 165 FDVIVSNPP 173
            DVI+ +PP
Sbjct: 377 PDVIILDPP 385


>gi|222147154|ref|YP_002548111.1| ribosomal RNA small subunit methyltransferase [Agrobacterium vitis
           S4]
 gi|221734144|gb|ACM35107.1| ribosomal RNA small subunit methyltransferase [Agrobacterium vitis
           S4]
          Length = 338

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKAL 134
           P +ELLV         R+         D G G G + + L  K     +    + +  AL
Sbjct: 181 PGSELLV--------SRLPDDFDGNAADFGAGWGYLSVMLAEKARRTNRIDLFEANYDAL 232

Query: 135 EIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           E AK N   N           D    S +  +D+++ NPP+ E    +    E       
Sbjct: 233 EQAKKNLARNCPHLTARFFWQDLGTESPKEKYDLVIMNPPFHEGHATEPSIGEAMIKAAA 292

Query: 194 ISLDGGIDGL 203
            +L GG D L
Sbjct: 293 DALRGGGDLL 302


>gi|161760558|ref|YP_072057.2| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
 gi|186897061|ref|YP_001874173.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
 gi|60390350|sp|Q665E3|PRMA_YERPS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|226710128|sp|B2K467|PRMA_YERPB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|186700087|gb|ACC90716.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis PB1/+]
          Length = 293

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 158 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 216

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 217 -DQPAELSADVVVAN 230


>gi|33865023|ref|NP_896582.1| hypothetical protein SYNW0487 [Synechococcus sp. WH 8102]
 gi|33638707|emb|CAE07002.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 389

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 6/93 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V +A+  ++P    R   RILD G GTG     L   +P  + +G+DIS  AL +A+   
Sbjct: 45  VLAAVHGAVPAGTVRP--RILDAGCGTGVSTDYLCHLNPGAEVLGIDISEGALAVARERL 102

Query: 142 VTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
             +G + +   L+ +  S +    EG FD I S
Sbjct: 103 QRSGAAAQVSQLRQEQRSLLDLESEGPFDYINS 135


>gi|89067213|ref|ZP_01154726.1| ribosomal RNA small subunit methyltransferase B, putative
           [Oceanicola granulosus HTCC2516]
 gi|89046782|gb|EAR52836.1| ribosomal RNA small subunit methyltransferase B, putative
           [Oceanicola granulosus HTCC2516]
          Length = 432

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 58/179 (32%), Gaps = 16/179 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+A A     +  R   R+LDL    G   L +           +DIS   L   + N  
Sbjct: 227 DAAAALPARLLGARPGERVLDLCAAPGGKTLQVAAT--GADVTALDISPDRLARVEENLA 284

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G++ R  TL  D  +  EG +D I+ + P   +  +           P  + DG   G
Sbjct: 285 RCGLAAR--TLAGDALAFDEGGWDAILLDAPCSATGTIRRHPDL-----PH-AKDGAEFG 336

Query: 203 --LSHYRTIADGVSRHLNKDGLCSV----EIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
             +     + D     L   G         +    +V V     +R    V    D  G
Sbjct: 337 RLIELQARLLDHALTLLRPGGRLVFCTCSLLPDEGEVQVEEALAARDDIAVLPLPDLPG 395


>gi|323701646|ref|ZP_08113318.1| biotin biosynthesis protein BioC [Desulfotomaculum nigrificans DSM
           574]
 gi|323533419|gb|EGB23286.1| biotin biosynthesis protein BioC [Desulfotomaculum nigrificans DSM
           574]
          Length = 277

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           S    +  D + ILD+G GTG     L++  P      VDI+   +E A+        S+
Sbjct: 37  SFEHKDTHDSINILDIGCGTGYFTEQLVRCYPNANITAVDIAPGMIEYARKKLR----SK 92

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSN 171
           + + L +D     +   +D+IVSN
Sbjct: 93  KIEFLCADIEEVEINRKYDLIVSN 116


>gi|315639285|ref|ZP_07894447.1| type I restriction-modification system DNA-methyltransferase
           [Campylobacter upsaliensis JV21]
 gi|315480611|gb|EFU71253.1| type I restriction-modification system DNA-methyltransferase
           [Campylobacter upsaliensis JV21]
          Length = 535

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 28/169 (16%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG----VGV 127
           F P+  + LL             K+ V ++ D   G+G++ L   K            G 
Sbjct: 220 FTPQEVSYLLARLV------SYGKQSVNKVYDPACGSGSLLLQFAKVLGIDNIKQGFFGQ 273

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWF----SSVEGLFDVIVSNPPYIESVIVDC 182
           +I+  +  + + N + + +  E FD    D       + +  FD IVSNPPY    I D 
Sbjct: 274 EINPTSYNLCRINMLLHDIGFENFDIALGDTLLEPKHADDEPFDAIVSNPPYPTKWIGDD 333

Query: 183 LGLEVRDFDPRISLDG------GIDGLSHYRTIADGVSRHLNKDGLCSV 225
                   DPR +  G        D L+    +       L+  G C++
Sbjct: 334 DPK--LINDPRFAPAGVLAPKSYAD-LAFTMHMLS----WLSPSGTCAI 375


>gi|291560904|emb|CBL39704.1| Methylase involved in ubiquinone/menaquinone biosynthesis
           [butyrate-producing bacterium SSC/2]
          Length = 167

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++     +IL++G G+GA+ +         K +G+D    A+      
Sbjct: 35  IMEQVHRVVLSHLDYDGQEKILEVGCGSGALIIRAALTWSKAKVIGID-YWGAVYTYSKA 93

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + + NAV+ GV+ R      D       +  FDV++SN  Y+   ++     ++RD
Sbjct: 94  LCEKNAVSEGVASRCVFQHGDAKQLDFPDESFDVVISN--YVYHNVMGADMQKLRD 147


>gi|289423415|ref|ZP_06425219.1| putative cobalt-precorrin-6Y C(15)-methyltransferase
           [Peptostreptococcus anaerobius 653-L]
 gi|289156173|gb|EFD04834.1| putative cobalt-precorrin-6Y C(15)-methyltransferase
           [Peptostreptococcus anaerobius 653-L]
          Length = 190

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 33/66 (50%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL +++      +LD+GTG+G++ +      P  + + VD +  A+ + ++N  
Sbjct: 16  EEVRAISLQKLDLARKKYLLDIGTGSGSISVEAGLNYPDLRILAVDKNPDAISLTRANIE 75

Query: 143 TNGVSE 148
             G+  
Sbjct: 76  KFGLEN 81


>gi|200391026|ref|ZP_03217637.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199603471|gb|EDZ02017.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|167766474|ref|ZP_02438527.1| hypothetical protein CLOSS21_00980 [Clostridium sp. SS2/1]
 gi|167711883|gb|EDS22462.1| hypothetical protein CLOSS21_00980 [Clostridium sp. SS2/1]
          Length = 177

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL-----E 135
           +++      L  ++     +IL++G G+GA+ +         K +G+D    A+      
Sbjct: 45  IMEQVHRVVLSHLDYDGQEKILEVGCGSGALIIRAALTWSKAKVIGID-YWGAVYTYSKA 103

Query: 136 IAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + + NAV+ GV+ R      D       +  FDV++SN  Y+   ++     ++RD
Sbjct: 104 LCEKNAVSEGVASRCVFQHGDAKQLDFPDESFDVVISN--YVYHNVMGADMQKLRD 157


>gi|167772467|ref|ZP_02444520.1| hypothetical protein ANACOL_03845 [Anaerotruncus colihominis DSM
           17241]
 gi|167665570|gb|EDS09700.1| hypothetical protein ANACOL_03845 [Anaerotruncus colihominis DSM
           17241]
          Length = 404

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD  T TG+  L             VD+S  A+ +A+ NAV NG+    +   ++ F 
Sbjct: 232 RVLDCFTHTGSFALN-AAHGGAAYVRAVDVSETAVTLARDNAVRNGLDGVIECQAANVFD 290

Query: 160 SVE------GLFDVIVSNPP 173
            +         FD I+ +PP
Sbjct: 291 LLPELEAAGERFDFIILDPP 310


>gi|124262982|ref|YP_001023452.1| precorrin-6Y C5-methyltransferase [Methylibium petroleiphilum PM1]
 gi|124263016|ref|YP_001023486.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Methylibium
           petroleiphilum PM1]
 gi|124262228|gb|ABM97217.1| precorrin-6Y C5-methyltransferase [Methylibium petroleiphilum PM1]
 gi|124262262|gb|ABM97251.1| precorrin-6Y C5,15-methyltransferase (decarboxylating) [Methylibium
           petroleiphilum PM1]
          Length = 446

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 72/229 (31%), Gaps = 39/229 (17%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHE---SIHRILGWRDF- 60
           R +   L    GL+    +   + +L   +R      +  + +         +L WR   
Sbjct: 179 RVARLLLAE--GLADEFQLAVAERLLQPDERVVTNLGVAEAAQQRFADPNVLLL-WRSAA 235

Query: 61  --YNVRLTLSSDTFEPRPETELLV--DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
               VR  L  D +E R   + L+      A SL R++ R+   + D+G G+GAV L   
Sbjct: 236 RPQPVRFGLPDDRYEQRHPDKGLITKHEVRAVSLARLQLREDSIVWDIGAGSGAVGLEAA 295

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
           +         ++ +   + IA  N  T  V      +     + ++G  D          
Sbjct: 296 RLCQAGHVYAIEKNEGDVAIAARNRATMAVGNH-TLVHGKAPAHLDGWLD---------- 344

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                          P     GG  G      +     R L   G   +
Sbjct: 345 ---------------PDAVFIGGSGG--ELAELIALALRRLKPGGHLVM 376


>gi|307944877|ref|ZP_07660214.1| ribosomal protein L11 methyltransferase [Roseibium sp. TrichSKD4]
 gi|307771801|gb|EFO31025.1| ribosomal protein L11 methyltransferase [Roseibium sp. TrichSKD4]
          Length = 296

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +   +   ILDLGTGTG + +A  K S     +  DI   A   A  NA  NG
Sbjct: 140 LEEIDRLLNIHEFNSILDLGTGTGVLAIAAAKLSRQS-VLATDIDPIATRTAGENAWLNG 198

Query: 146 VSERFDTLQSDWFSS----VEGLFDVIVSN 171
           V     T  ++        + G +D++++N
Sbjct: 199 VGPLVKTFTANGMEDRKFGLYGPYDLVIAN 228


>gi|291277029|ref|YP_003516801.1| type I restriction-modification system M protein [Helicobacter
           mustelae 12198]
 gi|290964223|emb|CBG40072.1| type I restriction-modification system M protein [Helicobacter
           mustelae 12198]
          Length = 542

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG----VGV 127
           F P+  ++LL   AL        +  V ++ D   G+G++ L   K            G 
Sbjct: 227 FTPQEVSQLLAKIALHG------QESVNKVYDPCCGSGSLLLQCAKVIGKENVLKGFYGQ 280

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGL----FDVIVSNPPY----IESV 178
           +I+     + + N   + +   +F+    D  +  +      FD IVSNPPY    +   
Sbjct: 281 EINLTTYNLCRINMFLHDIDYHKFNIAHGDTLTDPKHRDDEPFDAIVSNPPYSTKWVGDD 340

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
               +G E      +++  G  D L+    +       L+  G C++
Sbjct: 341 DPTLMGDERFRAAGKLAPKGSAD-LAFTMHMLHS----LSNSGTCAI 382


>gi|300709256|ref|XP_002996794.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01]
 gi|239606119|gb|EEQ83123.1| hypothetical protein NCER_100053 [Nosema ceranae BRL01]
          Length = 196

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L    +          +  RILDL  GTG +  A+   +P    VGVDI  +A++I K N
Sbjct: 32  LAAHIVYAIHTLHNDLEDKRILDLCCGTGMLSAAVSFFNP-STIVGVDIDYEAIKIYKEN 90

Query: 141 AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPY 174
                     D +++D F+++E   G FD ++ NPP+
Sbjct: 91  LDHL---NNVDIVKAD-FNNLEFRSGFFDTVIMNPPF 123


>gi|269125964|ref|YP_003299334.1| type 12 methyltransferase [Thermomonospora curvata DSM 43183]
 gi|268310922|gb|ACY97296.1| Methyltransferase type 12 [Thermomonospora curvata DSM 43183]
          Length = 474

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L +  +   L  +   D  R++DLG G G +   LL +  F +  GVD+S +AL +A+ N
Sbjct: 280 LAEQRIRAVLQVLRDHDAPRVIDLGCGAGRLLTRLLADPFFTRVTGVDVSHRALAMARRN 339

Query: 141 AVTN--GVSERFDTLQSDWFSSVEGLF 165
           A     G   R++  Q     + +G F
Sbjct: 340 AERAAVGRERRWEVFQGALTYA-DGRF 365


>gi|218893714|ref|YP_002442583.1| putative nucleotide methyltransferase [Pseudomonas aeruginosa
           LESB58]
 gi|218773942|emb|CAW29756.1| putative nucleotide methyltransferase [Pseudomonas aeruginosa
           LESB58]
          Length = 374

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 27/156 (17%)

Query: 90  LPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           LP + +    +R  DLG G G + +A    +P  +   VD S  A++ A+ N        
Sbjct: 223 LPHLPRSLGALRAADLGCGNGVLGIAYALLNPQAELALVDESYMAVQSARENWRAALGER 282

Query: 149 RFDTLQSD-WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                  D       G  D+++ NPP+ +  +V                     G     
Sbjct: 283 PATFRADDGLAGQAAGSLDLVLCNPPFHQQQVV---------------------GDFLAW 321

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQ---KVDVVRIFE 240
            +       L   G   + +G         + R+F 
Sbjct: 322 RMFLQARDALAAGGELWI-VGNRHLGYHAKLKRLFR 356


>gi|148975318|ref|ZP_01812242.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrionales
           bacterium SWAT-3]
 gi|145965242|gb|EDK30492.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrionales
           bacterium SWAT-3]
          Length = 426

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 22/147 (14%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+E  +   ++++GTG G + + + +           IS    E+A+    + G++++ 
Sbjct: 190 ERLELSESDSVVEIGTGWGGLAIFMAQHY-GCHVTTTTISDAQHELAEQRVKSLGLTDKI 248

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLD--GG------- 199
             L+ D + ++ G +D +VS        +++ +G E     F+   SL    G       
Sbjct: 249 TLLKED-YRNLTGEYDKLVS------IEMIEAVGHEYLQTFFEKCSSLLKPSGKMLIQAI 301

Query: 200 --IDG-LSHYRTIADGVSRHLNKDGLC 223
              DG    YR   D + +++   G  
Sbjct: 302 TIADGRYEKYRKGVDFIQKYIFPGGCL 328


>gi|325980944|ref|YP_004293346.1| Methyltransferase type 11 [Nitrosomonas sp. AL212]
 gi|325530463|gb|ADZ25184.1| Methyltransferase type 11 [Nitrosomonas sp. AL212]
          Length = 216

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 47/137 (34%), Gaps = 24/137 (17%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  + R   +    +LD+G GTG + L + +  P     G+DI  + L IA+  A   G 
Sbjct: 35  AGLIARAHIQSGQTVLDVGCGTGTLALLMKQGHPDVAVHGLDIDAEILRIAQRKAAQAGQ 94

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +  +    +      +   D +V+      S+++  L  + +                  
Sbjct: 95  NILWQQGTATCLPYPDQSVDHVVA------SLLLHHLARQDKQH---------------- 132

Query: 207 RTIADGVSRHLNKDGLC 223
             +     R L   G  
Sbjct: 133 --MLREAFRVLKPGGAL 147


>gi|255942519|ref|XP_002562028.1| Pc18g01840 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586761|emb|CAP94408.1| Pc18g01840 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 330

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 37/140 (26%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L +   +D  R+LDLGTGTG   +     +P  + +G+D+S             + 
Sbjct: 80  LKGELLKAPVKDPKRVLDLGTGTGLWAIEYADTNPNSQVIGIDLSA---------IQPSW 130

Query: 146 V--SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V  + RF+    +   S    FD       YI       L   +RD D            
Sbjct: 131 VPPNCRFEIDDFEQPWSYSKPFD-------YIHGRE---LEGSIRDHD------------ 168

Query: 204 SHYRTIADGVSRHLNKDGLC 223
                +      +LN +G  
Sbjct: 169 ----LLFRQALDNLNPNGWL 184


>gi|157374425|ref|YP_001473025.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|226725393|sp|A8FSS4|RUMA_SHESH RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|157316799|gb|ABV35897.1| RNA methyltransferase, TrmA family [Shewanella sediminis HAW-EB3]
          Length = 442

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 8/95 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +S +  ++  +  +   R+LDL  G G   L L K     + +GV+   + ++ A+ NA 
Sbjct: 283 ESMVKQAVDWLSVKPNERVLDLFCGVGNFSLPLAKS--GAEVIGVEGVPEMVKQARENAA 340

Query: 143 TNGVSERFDTLQSDWFSSVE-----GLFDVIVSNP 172
            +G+ +      +D  + +      G  D ++ +P
Sbjct: 341 DSGL-DNVSFFHTDLSADLSKETWLGKVDKLLLDP 374


>gi|325846714|ref|ZP_08169629.1| methyltransferase small domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481472|gb|EGC84513.1| methyltransferase small domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 233

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 22/177 (12%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +DS L  +  +++K   +  +D+G G G + LA L         G++I  K  EI   N 
Sbjct: 25  IDSILLANFSKMKKNKTL--IDVGAGNGILSLACLSYYNLSNVYGIEIQEKKAEIFNENL 82

Query: 142 VTNGVSERFDTLQSDWFSSVEGLF-DVIVSNPPYIESVIVDCLGLE---VRDFDPRISLD 197
             N ++      +    ++    F D I++NPPY +         E   +   + +++L 
Sbjct: 83  KLNSINNIEIINKDLNLTNFPNNFCDYIITNPPYYKKGANIKNDKEEFLLSRQEIKMNLA 142

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRK---LFLVNAFK 251
                      I    ++ L   G   +     +   +V I +      L  +   +
Sbjct: 143 ----------DIFSFSNKTLKDKGKLFMIH---KPERLVDIIKESGNLKLKRIKFVQ 186


>gi|296314313|ref|ZP_06864254.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea
           ATCC 43768]
 gi|296838974|gb|EFH22912.1| ribosomal protein L11 methyltransferase [Neisseria polysaccharea
           ATCC 43768]
          Length = 295

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAIRASKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|88797559|ref|ZP_01113148.1| hypothetical protein MED297_10416 [Reinekea sp. MED297]
 gi|88779731|gb|EAR10917.1| hypothetical protein MED297_10416 [Reinekea sp. MED297]
          Length = 414

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 43/174 (24%)

Query: 76  PETELLVDSALAFSLPRIEKRD-------------------VVRILDLGTGTGAVCLALL 116
           PE   L+++ + F  P I  +                      R+LD+ +  G   +   
Sbjct: 196 PEQVALIENGVQFHAPLISGQKTGWFYDHRPNRALAAKWSAGKRVLDVFSYLGGWGITCA 255

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVS 170
            +    + +  D+S  AL     NA  NG  +R  T+Q D F  ++        FDV++ 
Sbjct: 256 AQGA-AEVICSDVSNSALSGVMENARLNGCDDRVSTIQGDAFDVLDQLNQERQRFDVVIV 314

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +PP   +   D    E                   Y+ + +   + +N  GL  
Sbjct: 315 DPPAFIARRKDIAAGE-----------------RAYQKLNEQAMKLVNYGGLLI 351


>gi|326333188|ref|ZP_08199435.1| UbiE/COQ5 methyltransferase [Nocardioidaceae bacterium Broad-1]
 gi|325948832|gb|EGD40925.1| UbiE/COQ5 methyltransferase [Nocardioidaceae bacterium Broad-1]
          Length = 231

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 45/134 (33%), Gaps = 32/134 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R    +LD+G GTG +  A+L+  P     G D    AL +A   A   GV        +
Sbjct: 55  RAGQTVLDVGCGTGNLSFAVLRAVPGAVVTGHDPDASALRLAARKAGRRGVRLSLVQGYA 114

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL----DGGIDGLSHYRTIAD 211
           D     +G  D IVS+                      ++L    D G +G         
Sbjct: 115 DRLLPEDGSVDHIVSS----------------------LALHHVDDAGREGFG------R 146

Query: 212 GVSRHLNKDGLCSV 225
              R L   G  ++
Sbjct: 147 EAYRVLKPGGRVTI 160


>gi|297537252|ref|YP_003673021.1| 50S ribosomal protein L11 methyltransferase [Methylotenera sp. 301]
 gi|297256599|gb|ADI28444.1| ribosomal protein L11 methyltransferase [Methylotenera sp. 301]
          Length = 295

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L +    + ++D   +LD G G+G + +A  K+    + +G DI  +A++ +  NA  N 
Sbjct: 154 LKWLTETVSQQD--SVLDYGCGSGILAIA-AKKLGASEVIGTDIDPQAIQSSVYNAEQNN 210

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V+   D   +  + S E  FD++V+N
Sbjct: 211 VAA--DFYHASKYQSRE--FDIVVAN 232


>gi|218548378|ref|YP_002382169.1| 23S rRNA methyluridine methyltransferase [Escherichia fergusonii
           ATCC 35469]
 gi|226725409|sp|B7LN23|RUMB_ESCF3 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|218355919|emb|CAQ88534.1| 23S rRNA m(5)U747 methyltransferase [Escherichia fergusonii ATCC
           35469]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
            + L  R F +V L +   +F    +T  +V S L A +   + +  V  + DL  G G 
Sbjct: 191 QQALAER-FNDVPLWIRPQSFF---QTNPVVASQLYATARDWVRQLPVKHMWDLFCGVGG 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVI 168
             L     +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   +++
Sbjct: 247 FGLHCA--TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATTQGEVPELV 304

Query: 169 VSNPP 173
           + NPP
Sbjct: 305 LVNPP 309


>gi|168263599|ref|ZP_02685572.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205347794|gb|EDZ34425.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 375

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +V L +   +F     T  +     A +   + +  V  + DL  G G   L     +
Sbjct: 198 FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGFGLHCA--T 253

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPP 173
           P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++ NPP
Sbjct: 254 PQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVLVNPP 309


>gi|332976078|gb|EGK12947.1| UbiE/COQ5 family methyltransferase [Psychrobacter sp. 1501(2011)]
          Length = 185

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 44/179 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD G GTG    AL       +   +DIS K +EIAK+ A+ + + E  + LQ+D F  
Sbjct: 14  VLDYGCGTGTTACALAHHVK--QIHAIDISLKMIEIAKAKAIMSKI-ENINFLQTDIFDK 70

Query: 161 --VEGLFDVI--------VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH----- 205
                 FD I        VSNP  +   I D L  E               GL       
Sbjct: 71  RYHNDSFDTILAFNMLHTVSNPHEVTQRIHDLLKPE---------------GLFISVTPC 115

Query: 206 YR---------TIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGG 255
            R          I   + R L K G+  +EI   +  D+  +  + +  ++   K Y G
Sbjct: 116 LREKMSFSVSAQI--QLIRMLCKIGIIPIEIRRLKSSDLDDLMANAEFEIIETEKTYKG 172


>gi|302668597|ref|YP_003833045.1| type I restriction modification system M subunit HsdM [Butyrivibrio
           proteoclasticus B316]
 gi|302397561|gb|ADL36463.1| type I restriction modification system M subunit HsdM [Butyrivibrio
           proteoclasticus B316]
          Length = 531

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 29/210 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             ++G   F +     + + + P    ++L   A+       E++  +++ D   G+G++
Sbjct: 178 EYLIG--QFASETGKKAGEFYTPHGPAQILCRIAMLGQ----EEKKGLQVYDPCMGSGSL 231

Query: 112 CLALLKESPF---FKGVGVDISCKALEIAKSNAVTNGVS------ERFDTLQSDWFSSVE 162
            L+ +  S      K  G ++      +A+ N   +GV          DTL +DW +  E
Sbjct: 232 MLSCMHYSKEPDYIKYYGQELMPSTYNLARMNMFLHGVLPENQHLRNGDTLDADWPTDEE 291

Query: 163 GLFDVIVSNPPYIESVIVDC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             FDV+  NPPY  +              D+   ++     D    Y  +  G   HL  
Sbjct: 292 TEFDVVTMNPPYSANWSAAEGFKQDERFMDYGGVLAPKSKAD----YAFLLHG-FYHLKP 346

Query: 220 DGLCSVEIGYN------QKVDVVRIFESRK 243
           +G  ++ + +        +  +  I     
Sbjct: 347 NGTMAIVLPHGVLFRGASEGAIREILLKNG 376


>gi|291165734|gb|EFE27782.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Filifactor alocis ATCC
           35896]
          Length = 547

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 14/119 (11%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL---ALLKESPFFKGVGVDISCKALE 135
           E+L           +E R    I DL +GTG + +    + K     K + +++  +A+E
Sbjct: 293 EILYSKVREMVKKVLEHRQEETIFDLYSGTGTIGILVSTIAK-----KVIAIELIEEAVE 347

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +AK NA  NGV E  + +  D    V   E    +I+ +PP   S +      +V +F+
Sbjct: 348 MAKENAKMNGV-ENVEFIAGDVAKEVGKREEKPYLIILDPP--RSGMHPKAIGDVLNFE 403


>gi|218677196|ref|YP_002396015.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
           LGP32]
 gi|218325464|emb|CAV27621.1| Cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
           LGP32]
          Length = 426

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     R+E  +   ++++GTG G + + + +           IS    E+A+      G
Sbjct: 185 MKTICERLELSESDNVVEIGTGWGGLAIFMAQHY-GCHVTTTTISDAQHELAEQRVKALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++++   L+ D + ++ G +D +VS
Sbjct: 244 LTDKITLLKED-YRNLTGEYDKLVS 267


>gi|189485521|ref|YP_001956462.1| putative RNA methyltransferase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
 gi|170287480|dbj|BAG14001.1| putative RNA methyltransferase [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 449

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +      L  +       +LDL  GTGA+ +++       + +GV+   +A++ AK NA+
Sbjct: 291 EILYTEILRLLNPSKYTVLLDLYCGTGAIGISMAHNVK--RVIGVECIGQAIDNAKENAL 348

Query: 143 TNGVSERFDTLQS---DWFSSVEGLFDVIVSNPP 173
            N V    +   S   DW    +  FD +V +PP
Sbjct: 349 ANNVF-NAEFYASDAEDWIKENKSCFDAVVVDPP 381


>gi|16081974|ref|NP_394384.1| hypothetical protein Ta0926 [Thermoplasma acidophilum DSM 1728]
 gi|10640203|emb|CAC12055.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 329

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 7/110 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R     +     P       +    +  R    +   +LD+ +G G   L + K    
Sbjct: 150 GIRFKFDPEKIMFSPG------NTNERTRMRYMTFEGETVLDMFSGIGYFALPVAKYGNP 203

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVS 170
            +    DI+  A+   K NAV NGV      +  D   S  +G FD I+ 
Sbjct: 204 MRIFACDINPDAIHYLKENAVINGVENIVVPILGDSRLSCPKGPFDSIIM 253


>gi|218132418|ref|ZP_03461222.1| hypothetical protein BACPEC_00277 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992756|gb|EEC58758.1| hypothetical protein BACPEC_00277 [Bacteroides pectinophilus ATCC
           43243]
          Length = 547

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + +   +   ++  +F    +T  L  +   + +   I       + DL +GTG +   +
Sbjct: 272 YEELLGLTFRITPFSFF---QTNSLGAEVLYSTAREYIGTTKDKTVFDLYSGTGTIAQLM 328

Query: 116 LKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSN 171
               P  K  +GV+I  +A+  A+ NA  NG++ + + +  D       ++   D+I+ +
Sbjct: 329 A---PVAKKVIGVEIVEEAVVAARENAAHNGLT-QCEFIAGDVLKVIDDIKDKPDIIILD 384

Query: 172 PP 173
           PP
Sbjct: 385 PP 386


>gi|145352664|ref|XP_001420658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580893|gb|ABO98951.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 245

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 18/146 (12%)

Query: 58  RDFYNVR-LTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           R+ Y V   T+      P    R      +    A S P  +   V  +LD+GTG  A+ 
Sbjct: 20  REEYGVEAWTVPRGRLVPTATNRERYLEWLARLRALSAPSGDDASVW-VLDIGTGASAIY 78

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWFSSVEGL------- 164
             L      ++ VG D+  +AL  A+ N   N  +    +   +                
Sbjct: 79  ALLGAAGRGWRFVGTDVCDEALTSARENVRRNPHLESLIEIRDARGEDGARDRVLRGVVR 138

Query: 165 ----FDVIVSNPPYIESVIVDCLGLE 186
               F   + NPP+ E++        
Sbjct: 139 DGETFTFCMCNPPFFETMDEAGRNPN 164


>gi|19074311|ref|NP_585817.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY)
           [Encephalitozoon cuniculi GB-M1]
 gi|19068953|emb|CAD25421.1| N6 ADENINE SPECIFIC DNA METHYLASE (METHYLTRANSFERASE SUPERFAMILY)
           [Encephalitozoon cuniculi GB-M1]
          Length = 164

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 68/178 (38%), Gaps = 41/178 (23%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           D +EP  +T  L+D+         E  ++  +LDLGT TG +   L K +     V  D+
Sbjct: 2   DWYEPGEDTYTLMDAL------EREGLEMKIVLDLGTSTGVITEQLRKRN---TVVSTDL 52

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + +ALE         G   R D L S    SV    DV+V NPPY+       +G     
Sbjct: 53  NIRALES-----HRGGNLVRADLLCSINQESV----DVVVFNPPYVPDTDDPIIG----- 98

Query: 190 FDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
                   GG  G        D V+    +L       +E   N+  +V+   E R  
Sbjct: 99  --------GGYLGREVIDRFVDAVTVGMLYL-----LVIE--ANRPKEVLARLEERGY 141


>gi|262372856|ref|ZP_06066135.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter junii
           SH205]
 gi|262312881|gb|EEY93966.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter junii
           SH205]
          Length = 349

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 58/180 (32%), Gaps = 38/180 (21%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             +LG R  Y+        T     E     + AL     R + +D   IL+LG G G+ 
Sbjct: 81  QAVLGKRLKYSACFFPHDHTTLDEAE-----EFALQIYSDRAQLQDGQEILELGCGWGSF 135

Query: 112 CLALLKESPFFKGVGVDISCK----ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            L + +  P  K  GV  S       L  A+     N  + +  T   +        FD 
Sbjct: 136 TLWMAERYPNAKITGVSNSATQRQHILAEAEK---RNLNNIQIITCDVNVLELKTNTFDR 192

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +VS            +   VR+                Y+ + + +   L +DG     I
Sbjct: 193 VVSV----------EMFEHVRN----------------YQKLFEKIQSWLKEDGKLWCHI 226


>gi|260434959|ref|ZP_05788929.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109]
 gi|260412833|gb|EEX06129.1| SAM-dependent methyltransferase [Synechococcus sp. WH 8109]
          Length = 389

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 5/91 (5%)

Query: 85  ALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            LA  L  I  + +  RILD G GTG     L   +P    +GVDIS  AL +A+     
Sbjct: 45  VLAAVLGSIPAKMEAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCQR 104

Query: 144 NGVSERFDTLQSDWFSSV----EGLFDVIVS 170
           +G +E+  +L+ +  S +    EG FD I S
Sbjct: 105 SGAAEQVASLRQEQRSLLDLSDEGSFDYINS 135


>gi|261339579|ref|ZP_05967437.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318399|gb|EFC57337.1| cyclopropane-fatty-acyl-phospholipid synthase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 382

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 37/150 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++    +R+LD+G G G +   + K       VGV IS +  ++A+       
Sbjct: 156 LRLICEKLQLEPGMRVLDIGCGWGGLAYFMAKHY-GVSVVGVTISAEQQKMAQERCQGLD 214

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD---PRISLDGGIDG 202
           V  R        +  +   FD IVS                V  F+   P+         
Sbjct: 215 VDIRLQD-----YRDLNEQFDRIVS----------------VGMFEHVGPKN-------- 245

Query: 203 LSHYRTIADGVSRHLNKDGLCSVE-IGYNQ 231
              Y+T      R+L  DG+  +  IG  Q
Sbjct: 246 ---YKTYFTVADRNLKPDGIFLLHTIGSKQ 272


>gi|54294134|ref|YP_126549.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens]
 gi|53753966|emb|CAH15437.1| hypothetical protein lpl1198 [Legionella pneumophila str. Lens]
 gi|307609945|emb|CBW99473.1| hypothetical protein LPW_12461 [Legionella pneumophila 130b]
          Length = 390

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 21/129 (16%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL T TG   L   K         VD S +A+E AK+NAV N +    + +++D 
Sbjct: 221 GKRVLDLYTFTGGFALHAAKAGA-LHVTAVDSSAQAIEQAKNNAVLNHL-NTIEFIKADA 278

Query: 158 FSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              ++  G +DV++ +PP +            +++               YR +     +
Sbjct: 279 REYLKMAGEYDVVILDPPKLVPSQKHLQQ--AKNY---------------YRFLHREAFK 321

Query: 216 HLNKDGLCS 224
           ++    L  
Sbjct: 322 YMKPGSLLM 330


>gi|87125410|ref|ZP_01081256.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917]
 gi|86167179|gb|EAQ68440.1| hypothetical protein RS9917_08330 [Synechococcus sp. RS9917]
          Length = 407

 Score = 56.6 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 6/95 (6%)

Query: 82  VDSALAFSLPRIE--KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           V SA+   LP         +R+LD G GTG     L   +P    + VDIS  ALE+A+ 
Sbjct: 44  VQSAVRGQLPCPSSGAPHPLRLLDAGCGTGVSTDYLCHLNPGADVLAVDISAGALEVARE 103

Query: 140 NAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
               +G  ER   L+ +  S +    EG FD I S
Sbjct: 104 RLRRSGGGERVVALRQEQRSLLDLAGEGPFDYINS 138


>gi|322491461|emb|CBZ26733.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 604

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 24/137 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +++ L       E      +LDL +GTG + L L K     + +G+++   A+  A+ NA
Sbjct: 387 METMLTKVAEVAELSAGTTLLDLCSGTGTIGLTLSKHVK--RVIGIELVESAVANARRNA 444

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             N ++   +         VE L   ++S  P  +   +      V   DP  +   G++
Sbjct: 445 QQNSIT-NAEFHCGR----VEHLLPSVISGLPAEDRGDI------VVVLDPPRA---GVN 490

Query: 202 --------GLSHYRTIA 210
                   G+   R + 
Sbjct: 491 STVLKWIRGMETIRRVV 507


>gi|254428061|ref|ZP_05041768.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
 gi|196194230|gb|EDX89189.1| Methyltransferase small domain family [Alcanivorax sp. DG881]
          Length = 398

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+ +  G   +             VD S  A +    NA  NGV++   ++Q D
Sbjct: 220 KGARVLDVFSYCGGWGVQAALAGAES-VTCVDGSEMATDYVHRNAELNGVADTVGSIQGD 278

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F++++        +D++V +PP       D                   +GL+ Y  I 
Sbjct: 279 AFAAMKQLIADGEKYDLVVLDPPAFIKRKKDF-----------------KNGLAGYHAIN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R +   G   
Sbjct: 322 ELAMRLVKPGGYLV 335


>gi|159043649|ref|YP_001532443.1| ribosomal L11 methyltransferase [Dinoroseobacter shibae DFL 12]
 gi|157911409|gb|ABV92842.1| ribosomal L11 methyltransferase [Dinoroseobacter shibae DFL 12]
          Length = 289

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 43/156 (27%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G GT  + +A  +       V  DI   A+++A++N   NG++ +   +++     
Sbjct: 152 VLDVGCGTAVLAMAAARVF-DTTVVASDIDPVAVDVAEANLAANGMAGQVICVEATGLDH 210

Query: 161 VE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            E    G F VI +N   ++  ++D                           +A  ++  
Sbjct: 211 PEIAGAGPFGVIFAN--ILKGPLID---------------------------LAPAITAA 241

Query: 217 LNKDGLCSV-----EIGYNQKVDVVRIFESRKLFLV 247
           L   G   +     E    Q  +V+  +    L LV
Sbjct: 242 LAPQGHVILSGLLNE----QASEVINAYADAGLSLV 273


>gi|162420605|ref|YP_001605751.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola]
 gi|165937513|ref|ZP_02226076.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|270488616|ref|ZP_06205690.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27]
 gi|21956886|gb|AAM83806.1|AE013621_6 methylase for 50S ribosomal subunit protein L11 [Yersinia pestis
           KIM 10]
 gi|45438490|gb|AAS64036.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|162353420|gb|ABX87368.1| ribosomal protein L11 methyltransferase [Yersinia pestis Angola]
 gi|165914618|gb|EDR33232.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|270337120|gb|EFA47897.1| ribosomal protein L11 methyltransferase [Yersinia pestis KIM D27]
          Length = 306

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 171 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 229

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 230 -DQPAELSADVVVAN 243


>gi|16759792|ref|NP_455409.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29142435|ref|NP_805777.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|213052506|ref|ZP_03345384.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213583498|ref|ZP_03365324.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
 gi|213611249|ref|ZP_03370075.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213647857|ref|ZP_03377910.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|213855247|ref|ZP_03383487.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|20455397|sp|Q8Z841|RUMB_SALTI RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|25322734|pir||AG0606 hypothetical RNA methyltransferase (EC 2.1.1.-) [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16502085|emb|CAD05321.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138065|gb|AAO69626.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 375

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|327481788|gb|AEA85098.1| putative SAM-dependent methyltransferase [Pseudomonas stutzeri DSM
           4166]
          Length = 311

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 13/133 (9%)

Query: 58  RDFYNVR-LTLSSDTFEP----RPETEL-LVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           R FY ++   + +    P    R +    L D   A +   I +   VR+LD+GTG   +
Sbjct: 55  RQFYGIQHWDIPAGYLCPPVPGRADYLHGLADLLAADNAGVIPRGAAVRVLDIGTGANCI 114

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSV---EGL 164
              +      ++  G DI   AL  A++    N + +  +  + D     F  +   +  
Sbjct: 115 YPLIGHREYGWRFTGSDIDATALASARTIVAANRLDKAIELRRQDTSTQLFKGILAADER 174

Query: 165 FDVIVSNPPYIES 177
           F++ + NPP+  S
Sbjct: 175 FELTLCNPPFHAS 187


>gi|312130885|ref|YP_003998225.1| (lsu ribosomal protein l11p)-lysine N-methyltransferase
           [Leadbetterella byssophila DSM 17132]
 gi|311907431|gb|ADQ17872.1| (LSU ribosomal protein L11P)-lysine N-methyltransferase
           [Leadbetterella byssophila DSM 17132]
          Length = 273

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 53/165 (32%), Gaps = 21/165 (12%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +L          +LD+GTGTG + + + K+         DI   ++E  K N   NGV
Sbjct: 130 MIALQLDIDHKGKSVLDVGTGTGILAI-MAKQLGAADVHSFDIDEWSVENGKENYELNGV 188

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
            +     Q    +     +D++++N   I   I+     E   F     L  G      Y
Sbjct: 189 ED-ITIDQGTIRTQNIKEYDIVLAN---INRNILLDEIPEYAKFSKDYLLVSG-----FY 239

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                 + R   ++G             V  I        V   K
Sbjct: 240 THDIQDIERVAEENGF----------KKVKEI-SKNNWAAVVFRK 273


>gi|301619777|ref|XP_002939250.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog [Xenopus
           (Silurana) tropicalis]
          Length = 384

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 62  NVRLTLSSDTF----EPRPETELLVDSALAFSLPR-IEKRDVVRILDLGTGTGAVCLALL 116
           ++RL +S  +F     P  ET       L  +L   I++     +LDL  GTGA+ L+L 
Sbjct: 191 DLRLRVSPTSFLQVNTPAAET-------LYTALGNMIQRHAHGTLLDLCCGTGAIGLSLA 243

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDVI-V 169
                   +GV++   A+  A+ NA  NG+        R + L  +  S  +    V+ V
Sbjct: 244 GYFKN--VIGVEMVEDAVLDARWNADFNGIENCQFLSGRAEKLLPNLLSYKQKELSVLAV 301

Query: 170 SNPP 173
           +NPP
Sbjct: 302 ANPP 305


>gi|296131243|ref|YP_003638493.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
 gi|296023058|gb|ADG76294.1| methyltransferase small [Cellulomonas flavigena DSM 20109]
          Length = 378

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 24/146 (16%)

Query: 82  VDSALAFSLPRIEK--RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           VD      L  +++        +DLG GTG + +AL +  P    V  D S  A+  A++
Sbjct: 212 VDIGTRALLAHLDEVGPTTGTAVDLGCGTGVLAVALARSRPGLDVVATDESAAAVASARA 271

Query: 140 NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
               NGV++R    ++     + +   DV++ NPP+     V           P ++   
Sbjct: 272 TVEVNGVTDRVRVTRAVGGDDLPDASADVVLLNPPFHVGATVA----------PAVA--- 318

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCS 224
                     +    +R L   G   
Sbjct: 319 --------HALFADAARLLRPGGELW 336


>gi|239628824|ref|ZP_04671855.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518970|gb|EEQ58836.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 475

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +     +L   +      + DL  G G + L L +++   K  GV+I  +A+E A+ NA 
Sbjct: 313 EKLYGTALEYADLSGNETVWDLYCGIGTISLFLAQKAK--KVYGVEIIPQAIEDARRNAA 370

Query: 143 TNGVSERFDTLQSDWFSSVEGLF-------DVIVSNPP 173
            NG+ +  +         +   +       DVIV +PP
Sbjct: 371 LNGM-DNVEFFVGKAEEVLPEQYEKNQIHADVIVVDPP 407


>gi|29893501|gb|AAO93130.1| Mg-protoporphyrin O-methyltransferase [Rubrivivax gelatinosus]
          Length = 233

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 13/108 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G GTGA  + L +     + V +D+S   +  A+     +      D    D   
Sbjct: 64  RVLDAGCGTGAASIELARR--GAEVVAIDLSPTLVGYARERLPESLGPGSIDFRSGDMLD 121

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-----------PRISL 196
              G FD +++    I     D +    R  +           PR +L
Sbjct: 122 PALGRFDHVIAMDSVIHYDAPDAVAALSRLAERTSTSMVFTFAPRTAL 169


>gi|330467565|ref|YP_004405308.1| o-methyltransferase involved in albicidin biosynthesis protein
           [Verrucosispora maris AB-18-032]
 gi|328810536|gb|AEB44708.1| o-methyltransferase involved in albicidin biosynthesis protein
           [Verrucosispora maris AB-18-032]
          Length = 347

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 27/139 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R+LDL  G G       +         +D     + +A  +A   GV++R +    
Sbjct: 169 RPSLRVLDLACGHGIYGYTFAQRHTQATVTSLDW-ENVVPVAARHAERLGVADRVEYRTG 227

Query: 156 DWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
           D F + + G +DV+              +   V              G    R       
Sbjct: 228 DMFTAPLGGPYDVV--------------MLTNVLHH------FSEERGTDLLRR----AR 263

Query: 215 RHLNKDGLCSVEIGYNQKV 233
             L  DG  ++ +G+    
Sbjct: 264 EALKPDGRLAL-VGFTTGD 281


>gi|168181545|ref|ZP_02616209.1| 23S rRNA -methyltransferase RumA [Clostridium botulinum Bf]
 gi|237796317|ref|YP_002863869.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           Ba4 str. 657]
 gi|182674982|gb|EDT86943.1| 23S rRNA -methyltransferase RumA [Clostridium botulinum Bf]
 gi|229260413|gb|ACQ51446.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           Ba4 str. 657]
          Length = 453

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 14/145 (9%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIV 169
             +  ++   K +GV++  +A++ A  NA  NG+    + +  D       V+   D+I+
Sbjct: 323 QIVASKAK--KVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDIII 379

Query: 170 SNPPYIESVIVDCLGLE-VRDFDPR 193
            +PP      V  + LE V  F+P+
Sbjct: 380 LDPP---RPGVHPVALEYVVKFEPK 401


>gi|163792511|ref|ZP_02186488.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium
           BAL199]
 gi|159182216|gb|EDP66725.1| Predicted SAM-dependent methyltransferase [alpha proteobacterium
           BAL199]
          Length = 396

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 24/134 (17%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL   TG   +       F +   +D S  AL++A   A  +GV++R  T ++D 
Sbjct: 222 GARVLDLYAHTGGFGVQCAVAGAF-QVDLIDRSGPALQVAALAAEMSGVTDRVTTRKADA 280

Query: 158 FSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F+++E        +DV++ +PP       D                GG      YR +A 
Sbjct: 281 FAALEHLITAGETYDVVICDPPAFAKSRKD---------------VGGAA--KAYRKLAR 323

Query: 212 GVSRHLNKDGLCSV 225
             ++     G+  +
Sbjct: 324 LAAQVTAPGGVLML 337


>gi|152998066|ref|YP_001342901.1| cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
           MWYL1]
 gi|150838990|gb|ABR72966.1| Cyclopropane-fatty-acyl-phospholipid synthase [Marinomonas sp.
           MWYL1]
          Length = 422

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           F +  +  SS  + P+  + L  + A    L     +++  +   +L++GTG G + +  
Sbjct: 158 FLDPTMMYSSAVY-PQVNSSL--EEASVNKLDRICQKLQLSEDDHLLEIGTGWGGMAIHA 214

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            K     +     IS +  E AK+     G+ ++   L  D +  ++G +D +VS
Sbjct: 215 AKHY-GCQVTTTTISKEQYEFAKARVEAEGLQDKITLLLED-YRDLQGQYDKLVS 267


>gi|322831255|ref|YP_004211282.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
 gi|321166456|gb|ADW72155.1| rRNA (guanine-N(2)-)-methyltransferase [Rahnella sp. Y9602]
          Length = 383

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 3/103 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +    R+ DLG G G + +  L  +P  + + VD S  A+E ++ N  
Sbjct: 219 DVGARFFMQHLPEGIEGRMADLGCGNGVIGMTALALNPDAEMLFVDESYMAVESSRINVE 278

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDC 182
            N   +  R     ++  + VE      ++ NPP+ +  ++  
Sbjct: 279 NNLPQDVSRCHFEVNNMLAGVERETLHAVLCNPPFHQGTVISD 321


>gi|302520924|ref|ZP_07273266.1| rRNA or tRNA methyltransferase [Streptomyces sp. SPB78]
 gi|302429819|gb|EFL01635.1| rRNA or tRNA methyltransferase [Streptomyces sp. SPB78]
          Length = 518

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 17/139 (12%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +  V  +LDLGTG+G   L     SP   +    D++ +AL  A      +G +E    L
Sbjct: 160 RTPVGSVLDLGTGSGIQAL---HASPHAARLTATDLNPRALAFAALTLALSG-AEPARLL 215

Query: 154 QSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
               F  V    FD+++SNPP++ S                   DGG +G    R +   
Sbjct: 216 AGSLFEPVGTETFDLVLSNPPFVISPGARLTYR-----------DGGREGDGLCRELVSS 264

Query: 213 VSRHLNKDGLCSVEIGYNQ 231
               LN+ G       +  
Sbjct: 265 AGERLNEGGYAQFLANWEH 283


>gi|294506816|ref|YP_003570874.1| Ribosomal protein L11 methyltransferase [Salinibacter ruber M8]
 gi|294343144|emb|CBH23922.1| Ribosomal protein L11 methyltransferase [Salinibacter ruber M8]
          Length = 280

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+GTGTG + +A  +        GVD +  A+  A+ N   N  ++     +  
Sbjct: 140 PGDRVLDVGTGTGVLAIAACRIGADA-ARGVDTNPDAVRNARENVRRNEETDCVTVQEGS 198

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
              +    +D++ +N      V+++ +   V    P
Sbjct: 199 VDLASGTQYDLVAAN--ITRRVLLELMPALVARLAP 232


>gi|239835004|ref|ZP_04683332.1| cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           intermedium LMG 3301]
 gi|239823067|gb|EEQ94636.1| cyclopropane-fatty-acyl-phospholipid synthase [Ochrobactrum
           intermedium LMG 3301]
          Length = 410

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L +   ++      RIL++G G GA+   L          G+ +S   L  A +   
Sbjct: 180 EQKLQYISEKLALEGGERILEIGCGWGALAGYLA-NCRNAHVTGITLSPSQLTWANAAVE 238

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G+SE  D    D +  V+G FD IVS
Sbjct: 239 NVGLSEAVDLRLQD-YRDVQGQFDRIVS 265


>gi|239908455|ref|YP_002955197.1| putative ribosomal protein L11 methyltransferase [Desulfovibrio
           magneticus RS-1]
 gi|239798322|dbj|BAH77311.1| putative ribosomal protein L11 methyltransferase [Desulfovibrio
           magneticus RS-1]
          Length = 286

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 33/170 (19%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   A A +         +R LDLGTG+G + + L +      GVG+DI  +A+  
Sbjct: 131 PTTALCLEAFAQAQTSGWLTPSMRFLDLGTGSGILGIGLCRL--GLTGVGLDIDPQAVWC 188

Query: 137 AKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           A  N   NGV            S + +  F+V+ +N           L        P ++
Sbjct: 189 AADNLRLNGVEGAMSLAVGGVGSLAPDSRFEVVAAN----------ILAA------PLMA 232

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKL 244
                        +A  ++RH+ + G+  +  I   Q  DV   +++  L
Sbjct: 233 -------------MAKLLTRHVAQGGMLVLSGILETQANDVAAAYQATGL 269


>gi|261344929|ref|ZP_05972573.1| ribosomal protein L11 methyltransferase [Providencia rustigianii
           DSM 4541]
 gi|282567070|gb|EFB72605.1| ribosomal protein L11 methyltransferase [Providencia rustigianii
           DSM 4541]
          Length = 294

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +      +G+DI  +A+  ++ NA  NGVSER     + 
Sbjct: 158 EGKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAITASRDNAERNGVSERLSLYLAK 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 -DQPQDLQADVVVAN 230


>gi|189502570|ref|YP_001958287.1| hypothetical protein Aasi_1234 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498011|gb|ACE06558.1| hypothetical protein Aasi_1234 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 524

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 28/132 (21%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +    IL++G GTG +   L        + +  D+S   +E+A+ NA T   +  F    
Sbjct: 298 KTTKNILEIGCGTGVLAAQLASVVDDSIQVLATDVSEAQIEVAR-NAHTKNRNLSFIVCD 356

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            +    ++  FD+I     Y+  VI+                            I   + 
Sbjct: 357 CNQVGQLQEKFDII-----YMRWVIIYQKN---------------------ISEIIHQLY 390

Query: 215 RHLNKDGLCSVE 226
           R L   G   +E
Sbjct: 391 RILKPGGYLIIE 402


>gi|134034811|gb|ABO45731.1| microcystin synthetase N-methyltranserase domain [Microcystis
           aeruginosa N-C 31]
          Length = 497

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPVAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 155

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 156 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 211

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 212 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 244

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 245 VRNLQLMEAFHADVELYK 262


>gi|116255441|ref|YP_771274.1| putative methyltransferase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260089|emb|CAK03188.1| putative methyltransferase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 353

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 11/167 (6%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LGW +        +   F P   + L+ +   A      + +    + D+G G GA  + 
Sbjct: 131 LGWHEHSTCLFRGTERFFRPGYNSHLVNEWIPALGGVEEKLKTGASVADVGCGHGASTIL 190

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           + +  P  +  G D    ++E AK+ A   GVS+R    Q          +D++      
Sbjct: 191 MAQAYPASRFTGFDYHGPSIERAKAAAKDAGVSDRVTFEQGSAAEFPGRGYDMVAMFDCL 250

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD-GVSRHLNKD 220
            +       G  V++     +L  G +G      I +     HL  +
Sbjct: 251 HDMGDPVGAGRHVKE-----TL--GPNG---TWLIVEPFAHDHLKDN 287


>gi|257452048|ref|ZP_05617347.1| type I restriction-modification system DNA methylase [Fusobacterium
           sp. 3_1_5R]
 gi|257466153|ref|ZP_05630464.1| type I restriction-modification system DNA methylase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917310|ref|ZP_07913550.1| N-6 DNA methylase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058596|ref|ZP_07923081.1| N-6 DNA methylase [Fusobacterium sp. 3_1_5R]
 gi|313684272|gb|EFS21107.1| N-6 DNA methylase [Fusobacterium sp. 3_1_5R]
 gi|313691185|gb|EFS28020.1| N-6 DNA methylase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 502

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 31/168 (18%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-------ALLKESPFFKG 124
           + P    + +V+         ++  D  R+ D   G+G + +       A          
Sbjct: 177 YTPSSIVKTIVEI--------LKPFDNCRVYDPCCGSGGMFVQSVKFLQAHSGNRNHISV 228

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFSSVEG--LFDVIVSNPPY-IESVIV 180
            G + +    ++AK N    G+   F   Q+D +F+ +      D I++NPP+ + +   
Sbjct: 229 FGQESNADTWKMAKMNMAIRGIDANFGPYQADTFFNDLHSTLKADFIMANPPFNLSNWGQ 288

Query: 181 DCLGLEVR---DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D L  +VR      P      G    +  + +      HL  +G   +
Sbjct: 289 DKLQDDVRWKYGLPP-----AGNANYAWIQHMVH----HLAPNGKIGL 327


>gi|289810736|ref|ZP_06541365.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 145

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 8   QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 64

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 65  GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 122

Query: 170 SNPP 173
            NPP
Sbjct: 123 VNPP 126


>gi|208434815|ref|YP_002266481.1| adenine specific DNA methyltransferase [Helicobacter pylori G27]
 gi|208432744|gb|ACI27615.1| adenine specific DNA methyltransferase [Helicobacter pylori G27]
          Length = 381

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K +   +L+   G G    + LK    
Sbjct: 7   NLDIKTLGQVFTPKN----IVDFMLTL------KHNQGSVLEPSAGDG----SFLKRLKK 52

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 53  A--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 96

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 97  APSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|34496439|ref|NP_900654.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum
           ATCC 12472]
 gi|38605125|sp|P60091|PRMA_CHRVO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|34102292|gb|AAQ58658.1| ribosomal protein L11 methyltransferase [Chromobacterium violaceum
           ATCC 12472]
          Length = 298

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 3/87 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L +   +++  +   +LD G G+G + +A   +      VG+DI  +A+  ++ NA  NG
Sbjct: 154 LQWLDKQLQGNE--SVLDYGCGSGILAIA-ALKLGAASAVGIDIDQQAVRASQDNAEQNG 210

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNP 172
           V   F    ++  +  + +   I++NP
Sbjct: 211 VKADFFLPNANPAAQYDVVLANILANP 237


>gi|88802991|ref|ZP_01118518.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P]
 gi|88781849|gb|EAR13027.1| tRNA (uracil-5-) -methyltransferase [Polaribacter irgensii 23-P]
          Length = 485

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 8/105 (7%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L +  + + L    K D   ++DL  GTG +   +  +S   + +GVDI   A+E A+ N
Sbjct: 319 LYNKVVEYVLEDKTKVDNTVVMDLFCGTGTIGQIVASKSKNAQIIGVDIVASAIEDAEKN 378

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
           A  N ++         +F++  G F  + S+P Y   +    L  
Sbjct: 379 AKRNNITG------VQFFAADVGKF--LTSHPEYENKIKTIILDP 415


>gi|332637824|ref|ZP_08416687.1| cyclopropane-fatty-acyl-phospholipid synthase [Weissella cibaria
           KACC 11862]
          Length = 397

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 26/143 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L ++      ++LD+G+G G + +   +E       GV +S +   + +      G
Sbjct: 156 VHHILDKLHAEPGKKLLDIGSGWGTLIITAAQEY-GLDAYGVTLSEEQYALTQERVKELG 214

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           + ++   +  D+    +  FD I S                V  F+  +    G + L  
Sbjct: 215 LEDKVHVMLMDYRDIKDMQFDYITS----------------VGMFE-HV----GKENLGE 253

Query: 206 YRTIADGVSRHLNKDGLCSVEIG 228
           Y      V+ +L  +G   +  G
Sbjct: 254 Y---FKKVAEYLVPNGRALI-HG 272


>gi|327395458|dbj|BAK12880.1| ribosomal protein L11 methyltransferase PrmA [Pantoea ananatis
           AJ13355]
          Length = 294

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 16/125 (12%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  ++  D+    ++D G 
Sbjct: 108 FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTSLCLTWLDGLDLAGKTVIDFGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A   +    + +G+DI  +A++ ++ NA  NGV++R                D
Sbjct: 168 GSGILAIA-ALKLGAAQAIGIDIDLQAIQASRDNAERNGVADRLSLYLPHQ-QPENLQAD 225

Query: 167 VIVSN 171
           V+V+N
Sbjct: 226 VVVAN 230


>gi|321456618|gb|EFX67720.1| hypothetical protein DAPPUDRAFT_63741 [Daphnia pulex]
          Length = 221

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 8/118 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           I+D   G G   +         + + +DI    +E+A+ NA   GV++R + +  D+F  
Sbjct: 68  IVDAFCGAGGNSIQFA--FKCERVIAIDIDPSKIELARHNASVYGVADRIEFIVGDFFQL 125

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
           +     DV+  +PP+     +      + D  P      G D     + I   ++  L
Sbjct: 126 APSLKADVVFLSPPWGGPKYLSAPQFCLEDMQPN-----GFDIFKAAQKITSNLAYFL 178


>gi|309777091|ref|ZP_07672057.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915161|gb|EFP60935.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 441

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 23/138 (16%)

Query: 54  ILGWRD------------FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRI 101
           ILG ++             ++++ ++SS +F      +  V    A    ++  ++   +
Sbjct: 241 ILGEKEKLLYGERVIVDSIHDLKFSISSKSFYQVNPKQTEVLYGKALEFAQLTGKET--V 298

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDL  G G + + L +++      G++I  +A++ A+ NA  NG++   + + SD  S  
Sbjct: 299 LDLYCGVGTISMFLAQQAR--HVTGIEIVPQAIQDARKNAALNGIA-NIEFVCSDAASYA 355

Query: 162 EGL------FDVIVSNPP 173
           + L       DVIV +PP
Sbjct: 356 KKLCEQGMHLDVIVVDPP 373


>gi|307329693|ref|ZP_07608850.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
 gi|306884633|gb|EFN15662.1| Methyltransferase type 12 [Streptomyces violaceusniger Tu 4113]
          Length = 258

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 58/185 (31%), Gaps = 35/185 (18%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L D ++A  L R    +  R LDLG G GA    LL   P+    GVDI   ALE A+  
Sbjct: 30  LADESVARLLDRAVADEADRALDLGCGGGAWLRRLLVRYPWMHAEGVDIHTAALEQAREG 89

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
           A   GV++R    + D    +    F +++S                           G 
Sbjct: 90  AEEAGVADRLVLHEMDASVFASAHRFHLVLS--------------------------VGA 123

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGN--- 256
                            L   G   V  G+ ++        +        + DY      
Sbjct: 124 AHAFGGLLPTLAAARELLAPGGHVLVGDGFWEREPDAAALSALG----ATWDDYADLATT 179

Query: 257 -DRVL 260
            DRV 
Sbjct: 180 VDRVT 184


>gi|32564931|ref|NP_499247.2| hypothetical protein ZK1128.2 [Caenorhabditis elegans]
 gi|29840843|sp|Q09357|MET16_CAEEL RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|24817627|emb|CAA87421.2| C. elegans protein ZK1128.2a, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 479

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 19/140 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            +DF N+ + +      PR   +L    L+D  L  +    +    V  +D+GTGT  + 
Sbjct: 61  KKDF-NLDVEIPPGHLVPRVPQKLNYCLLIDDLLKAN----KLTKNVIGIDIGTGTSCIH 115

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---------SDWFSSVEG 163
             +      +K +  D   K++ +A  N   NG+S     +           D  +++  
Sbjct: 116 ALIGARQFNWKFIATDGDEKSVRVAHENVAKNGLSSSICVVHVNPDVKTVLMDVVNTIPD 175

Query: 164 L-FDVIVSNPPYIESVIVDC 182
             +   + NPP+ E    D 
Sbjct: 176 TDYAFCMCNPPFFEKGNGDD 195


>gi|24371991|ref|NP_716033.1| ribosomal protein L11 methyltransferase [Shewanella oneidensis
           MR-1]
 gi|38605312|sp|Q8EJR7|PRMA_SHEON RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|24345846|gb|AAN53478.1|AE015487_12 ribosomal protein L11 methyltransferase [Shewanella oneidensis
           MR-1]
          Length = 293

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            ++D G G+G + +A LK     K  G+DI  +A++ +K+NA  N V+++ +    +   
Sbjct: 161 EVIDFGCGSGILAVAALKLGAK-KVTGIDIDYQAIDASKANAERNDVADQLELYLPE-DQ 218

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             +   DV+V+N        +  L  E      +++L G
Sbjct: 219 PADLKADVLVANILAGPLRELAPLIAERVKTGGKLALSG 257


>gi|331682368|ref|ZP_08382987.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli H299]
 gi|331079999|gb|EGI51178.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli H299]
          Length = 375

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 19/186 (10%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIH-RIL-GWRD 59
           ++  D    L  V    +    +     L   Q   L       +  + +H  I+ G  +
Sbjct: 129 ESQSDGGMMLRFVLRSDTKLAQLRKALPLLQEQLPQLKVIT---VNIQPVHMAIMEGETE 185

Query: 60  FY-------NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTG 109
            Y         R         P+   +    +     A +   + +  V  + DL  G G
Sbjct: 186 IYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVG 245

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DV 167
              L     +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++
Sbjct: 246 GFGLHCA--TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPEL 303

Query: 168 IVSNPP 173
           ++ NPP
Sbjct: 304 VLVNPP 309


>gi|282866035|ref|ZP_06275083.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
 gi|282559074|gb|EFB64628.1| Methyltransferase type 12 [Streptomyces sp. ACTE]
          Length = 293

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 38/77 (49%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L R+    V RI+DLG GTG    ALL+  P  +   VD S   L      A   G++ER
Sbjct: 47  LARLAGDGVTRIVDLGAGTGTGTFALLERFPAARVTAVDSSPDMLARLAGTARLRGLAER 106

Query: 150 FDTLQSDWFSSVEGLFD 166
             TL +D   ++ GL D
Sbjct: 107 VHTLHADADEALTGLVD 123


>gi|221633078|ref|YP_002522303.1| hypothetical protein trd_1094 [Thermomicrobium roseum DSM 5159]
 gi|221156238|gb|ACM05365.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
          Length = 253

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 24/169 (14%)

Query: 85  ALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           ALA +L          R+L+LG G G    A+       + V +D S +AL + + N   
Sbjct: 82  ALADALLLDPHPVHGQRVLELGCGLG--LTAIAALWAGARLVAIDYSAEALALTRWNCSR 139

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           N      + L+ +W    E L  VI S+   +  ++   +  E RD +P           
Sbjct: 140 NTGRVP-ELLRMNWRCPSEQLATVIGSSS--VPVILAADVLYEDRDVEP----------- 185

Query: 204 SHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFL-VNAF 250
                +   V   L   GL  + E G       +     +  F  V  +
Sbjct: 186 -----LLRLVEHLLAPGGLLWLAEPGRRTATTFIERLGQKGWFDEVETW 229


>gi|218248299|ref|YP_002373670.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|257060374|ref|YP_003138262.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|218168777|gb|ACK67514.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
 gi|256590540|gb|ACV01427.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 250

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 59/158 (37%), Gaps = 33/158 (20%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  +  +D  L   L  + + +V + LDLG G G +  A+ +  P  KG  +DIS   +E
Sbjct: 31  PLAKEQIDVMLR--LINLTQPNVDKFLDLGCGNGILGKAIYQNYPTAKGFFIDISDTMIE 88

Query: 136 IAKSNAVTNGVSERF---DTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
            A  N + +    +F   D  Q+ W + +  E  FDVIVS               + R  
Sbjct: 89  -AAKNTLNSDYESKFIIEDFSQNTWINCIIQEAPFDVIVS-------GFAIHHQPDHRK- 139

Query: 191 DPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEI 227
                           + I   +   L   GL   +E 
Sbjct: 140 ----------------QQIYQEIYDLLKPGGLFLNLEH 161


>gi|167992134|ref|ZP_02573232.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205329669|gb|EDZ16433.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261246138|emb|CBG23941.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992643|gb|ACY87528.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301157465|emb|CBW16955.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323129187|gb|ADX16617.1| 23S rRNA (uracil-5-)-methyltransferase rumB [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332987814|gb|AEF06797.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 376

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|163745814|ref|ZP_02153173.1| ribosomal protein L11 methyltransferase, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380559|gb|EDQ04969.1| ribosomal protein L11 methyltransferase, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 290

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E      ++D+G GT  + +A+ +  P    +  DI   A+E+A++N   N +S R   +
Sbjct: 145 EGFHGKNVVDIGCGTAVLAMAVARIWPEP-VLASDIDEVAVEVAQANVDANDLSGRVTCV 203

Query: 154 QSDWFSSVE----GLFDVIVSN 171
           ++  F   +      FD++ +N
Sbjct: 204 EAAGFDHPQLAQAAPFDLVFAN 225


>gi|160947757|ref|ZP_02094924.1| hypothetical protein PEPMIC_01692 [Parvimonas micra ATCC 33270]
 gi|158446891|gb|EDP23886.1| hypothetical protein PEPMIC_01692 [Parvimonas micra ATCC 33270]
          Length = 312

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + D+G+G+G + +  LK     K   VDI    +E    NA  N V +R      D    
Sbjct: 177 VFDIGSGSGILSVGALKLGAK-KVEAVDIDILGVEATLENAKLNKVEDRIVVHHGDLCEK 235

Query: 161 VEGLFDVIVSN 171
           +    DVIV+N
Sbjct: 236 LNSKADVIVAN 246


>gi|332992378|gb|AEF02433.1| cyclopropane-fatty-acyl-phospholipid synthase [Alteromonas sp. SN2]
          Length = 417

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 34/212 (16%)

Query: 34  QRFFLTNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----L 86
           Q F   N   ++ K+   H  LG   +  F +  +  SS  +   P+    ++ A    L
Sbjct: 125 QHFARRNTQDQAKKNIEAHYDLGNKLYTRFLDNTMMYSSAIY---PDVNASLEEAQNHKL 181

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                +++  +   +L++GTG G + +   K     K     IS +    A+       V
Sbjct: 182 KTICDKLQLTESDHLLEIGTGWGGLAVYAAKHC-GCKVTTTTISEEQYAWAEQWIERAQV 240

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD--FDPRISLDGGIDGLS 204
           S++   L+ D +  +EG +D +VS        +++ +G +     F+   SL    DGL 
Sbjct: 241 SDKVTLLKKD-YRLLEGKYDKLVS------IEMIEAVGKDYLGNFFEKCSSLL-KDDGLM 292

Query: 205 HYRTI-------------ADGVSRHLNKDGLC 223
             ++I              D + +++   G  
Sbjct: 293 LLQSITIDDRRYESYASSVDFIQKYIFPGGFL 324


>gi|328952181|ref|YP_004369515.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
 gi|328452505|gb|AEB08334.1| Methyltransferase type 11 [Desulfobacca acetoxidans DSM 11109]
          Length = 210

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 19/177 (10%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +++     +   +  R   ++L++G GTGA   +L    P  + +G+DIS   ++ AK  
Sbjct: 28  MLEPGRREAFKYLSSRPHQKVLEIGIGTGA---SLTLYPPHTQVIGIDISEGMIKKAKKR 84

Query: 141 --AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV-RDFDPRISLD 197
             A+ NG       + +         FD ++++           L  E+ R   P   + 
Sbjct: 85  LAALKNGHDVELKVMDACNLEFPNESFDAVIASYVITTVPDPHRLCKEILRVIRPGGQII 144

Query: 198 G-----GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                 G +G      + +     L       V IG+   +DVVR+     + + + 
Sbjct: 145 AVQHSRGENG-----HLLEKAKDALAP---LFVRIGFTTDLDVVRVMRESGMSIEHI 193


>gi|323697914|ref|ZP_08109826.1| ribosomal L11 methyltransferase [Desulfovibrio sp. ND132]
 gi|323457846|gb|EGB13711.1| ribosomal L11 methyltransferase [Desulfovibrio desulfuricans ND132]
          Length = 287

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 52/151 (34%), Gaps = 34/151 (22%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +    LDLGTG+G + + L K      G+G+DI  +A+  A  N   NGV+E        
Sbjct: 147 EGKTFLDLGTGSGILGIGLSKL--GLTGIGLDIDPQAVVCAVENVAANGVTESMRLAVGS 204

Query: 157 WFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 G  FD++V+N   I S  +  +  +                      I   V  
Sbjct: 205 IDCVEPGRTFDLVVAN---ILSGPLIEMAGD----------------------IVARV-- 237

Query: 216 HLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
                G   +   +   Q   V   +  R L
Sbjct: 238 --RPGGTLVLSGILADKQSDAVAEAYGRRGL 266


>gi|282856081|ref|ZP_06265367.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455]
 gi|282586102|gb|EFB91384.1| SAM-dependent methyltransferase [Pyramidobacter piscolens W5455]
          Length = 409

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 8/80 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L             VD+S  ALE+A+ NA  NG   + D + +D F  
Sbjct: 237 VLDCFTHTGSFALN-AVRGGAAHVTAVDVSAGALEMARHNAALNGCLGKMDFIAADVFDL 295

Query: 161 VE-------GLFDVIVSNPP 173
           +        G + +I+ +PP
Sbjct: 296 LSDMASRGRGEYGMIILDPP 315


>gi|182419838|ref|ZP_02951078.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium butyricum
           5521]
 gi|237666723|ref|ZP_04526708.1| 23S rRNA-methyltransferase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376386|gb|EDT73968.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium butyricum
           5521]
 gi|237657922|gb|EEP55477.1| 23S rRNA-methyltransferase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 451

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 12/125 (9%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I    +   +   +S  +F  +  T+   +   +     +   +   + DL  GTG + 
Sbjct: 267 YI--REELLGLEFNISPFSF-FQTNTK-GAEQLYSMVRDFMGDSENKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVI 168
             +    P  K  +G+++  +A+E AK NA  NG+ E  + L  D      +V+   D+I
Sbjct: 323 QIVA---PKAKKVIGIELIEEAVEAAKENAKLNGL-ENCEFLAGDVAEIIKNVKDKPDII 378

Query: 169 VSNPP 173
           + +PP
Sbjct: 379 ILDPP 383


>gi|118475607|ref|YP_892128.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40]
 gi|118414833|gb|ABK83253.1| methyltransferase [Campylobacter fetus subsp. fetus 82-40]
          Length = 261

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+  L +      + +   I+D+G GTG V + L   S   K  G+D+S   LE+ +++A
Sbjct: 26  VNFVLNWCEEIGVRFEGKSIIDIGCGTGTVAIPLA--SKGAKVCGIDLSPGMLEVLENDA 83

Query: 142 VTNGVSERFDTLQSDWFS-SVEGLFDVIVS 170
            T G+     T  SDW S  ++  FD++++
Sbjct: 84  KTLGIDSLITTFISDWDSYEIKDKFDIVLT 113


>gi|39936145|ref|NP_948421.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris CGA009]
 gi|39649999|emb|CAE28523.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris CGA009]
          Length = 416

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 26/129 (20%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+G+G G + L L  E+      GV +S + L+ A + A   G+++R   L  D
Sbjct: 171 PGQRVLDIGSGWGGLGLYLA-ETCGADVTGVTLSREQLQAANTRAAERGLADRARFLLQD 229

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
            +  V G FD IVS                V  F+          G+ HY T     +  
Sbjct: 230 -YRDVPGPFDRIVS----------------VGMFE--------HVGVDHYDTYFRRCAEL 264

Query: 217 LNKDGLCSV 225
           L  DG+  +
Sbjct: 265 LKDDGVMLL 273


>gi|238797913|ref|ZP_04641404.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC
           43969]
 gi|238718218|gb|EEQ10043.1| Ribosomal protein L11 methyltransferase [Yersinia mollaretii ATCC
           43969]
          Length = 296

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 32/146 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156
              ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER    L  D
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKD 217

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    DV+V+N           L   +R+  P IS             +      H
Sbjct: 218 QPADLSA--DVVVAN----------ILAGPLRELAPLIS-------------VLPVAGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +      Q   V   +E +
Sbjct: 253 LGLSGVLA-----TQAAGVAEAYEDK 273


>gi|328544685|ref|YP_004304794.1| methyltransferase small domain family [polymorphum gilvum
           SL003B-26A1]
 gi|326414427|gb|ADZ71490.1| Methyltransferase small domain family [Polymorphum gilvum
           SL003B-26A1]
          Length = 346

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 50/165 (30%), Gaps = 27/165 (16%)

Query: 66  TLSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
            +    F  RP       VD A A    R+      R  DLG G G +   +L   P  K
Sbjct: 164 AILDGRFVSRPGVFSWDHVDPASALLAERLPATLAGRGADLGAGFGYLAAVVLDTCP--K 221

Query: 124 GVGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
              +D+      AL++A+ N  +            D    ++G +D +V NPP+      
Sbjct: 222 VAALDLYEAEKRALDLARENLESVAAGRALGFHWQDVTRGLKGPYDFVVMNPPFHHGGKA 281

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D                         +      +  L   G   +
Sbjct: 282 DRA--------------------DIGQAFIRAAAGGLRPGGSLWM 306


>gi|325496801|gb|EGC94660.1| 23S rRNA methyluridine methyltransferase [Escherichia fergusonii
           ECD227]
          Length = 375

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +V L +   +F    +T  +V S L A +   +++  V  + DL  G G   L     
Sbjct: 198 FNDVPLWIRPQSFF---QTNPVVASQLYATARDWVQQLPVKHMWDLFCGVGGFGLHCA-- 252

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
           +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 253 TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|317047609|ref|YP_004115257.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
 gi|316949226|gb|ADU68701.1| rRNA (guanine-N(2)-)-methyltransferase [Pantoea sp. At-9b]
          Length = 396

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 25/135 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQS 155
           +  R+L+  + TG   ++        + + VD S  AL++AK N   NG+   R   L+ 
Sbjct: 220 ENARVLNCFSYTGGFAVS-ALLGGCREVISVDTSQDALDVAKQNVELNGLDVSRAQFLRD 278

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D F  +         FDVIV +PP              +  + +  L G   G   Y+ I
Sbjct: 279 DVFKLLRRYRDSGEKFDVIVMDPP--------------KFVENKNQLAGACRG---YKDI 321

Query: 210 ADGVSRHLNKDGLCS 224
                + LN +G+  
Sbjct: 322 NMLAMQLLNPNGILM 336


>gi|238758367|ref|ZP_04619545.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC
           35236]
 gi|238703490|gb|EEP96029.1| Ribosomal protein L11 methyltransferase [Yersinia aldovae ATCC
           35236]
          Length = 293

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 32/146 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSD 156
              ++D G G+G + +A   +      +G+DI  +A++ ++ NA  NGVSER    L  D
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAAHAIGIDIDPQAIQASRDNAQRNGVSERLALYLAKD 217

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +    DV+V+N           L   +R+  P IS             +      H
Sbjct: 218 QPADLSA--DVVVAN----------ILAGPLRELAPLIS-------------VLPVAGGH 252

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESR 242
           L   G+ +      Q V V + +E +
Sbjct: 253 LGLSGVLA-----TQAVGVAQAYEDK 273


>gi|168025794|ref|XP_001765418.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683268|gb|EDQ69679.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1093

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 70/232 (30%), Gaps = 45/232 (19%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++L      F P   +    +            RDV    +LG G G V +A+ +    
Sbjct: 88  SLKLLELPSIFIPEDWSFTFFEGISRHPDTGFRDRDVT---ELGCGNGWVSIAMAERWLP 144

Query: 122 FK-----------GVGVDISCKALEIAKSNAVTNGVS---------------ERFDTLQS 155
            K            +G+DI+ +A+++A  N   N +S               +R +   S
Sbjct: 145 RKASFTRLKIFMAVIGLDINPRAIKVAWVNLYLNALSDDGLSVLDHEGKSLLDRVEFHVS 204

Query: 156 DWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG------------GI 200
           D  +         D+IV   P I +     +   V +      L                
Sbjct: 205 DLLAYCREQNLTMDLIVGCIPQILNPDPTAMSKLVSENASEEFLYSLSNYCGLQGFVEDQ 264

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV-VRIFESRKLFLVNAFK 251
            GL       +     +   G     IG      V  R+F  R   +   ++
Sbjct: 265 FGLGLVARATEEGISIIRPTGKLIFNIGGRPGQAVTERLFSRRGFHIKKLWQ 316


>gi|18976583|ref|NP_577940.1| hypothetical protein PF0211 [Pyrococcus furiosus DSM 3638]
 gi|18892146|gb|AAL80335.1| hypothetical protein PF0211 [Pyrococcus furiosus DSM 3638]
          Length = 204

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 39/110 (35%), Gaps = 2/110 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V S L +    +       + DLG GTG + +         K   V+I  +A++I   N 
Sbjct: 32  VASTLLWLAYTLGDIKEKIVADLGAGTGVLSIGAALLGAK-KIYAVEIDEEAVKILLENL 90

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
               V    +   SD  S      D +V NPP+             + F+
Sbjct: 91  EEFKVRNVVEVKVSDV-SQFSENVDTVVMNPPFGSQRKHADRPFLTKAFE 139


>gi|16764244|ref|NP_459859.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|20455404|sp|Q8ZQJ5|RUMB_SALTY RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|16419391|gb|AAL19818.1| putative tRNA (uracil-5-)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|312911910|dbj|BAJ35884.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321223244|gb|EFX48313.1| 23S rRNA Uracil-5- -methyltransferase rumB [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
          Length = 376

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|296106821|ref|YP_003618521.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila
           2300/99 Alcoy]
 gi|295648722|gb|ADG24569.1| Predicted SAM-dependent methyltransferase [Legionella pneumophila
           2300/99 Alcoy]
          Length = 390

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 21/129 (16%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL T TG   L   K         VD S +A+E AK+NAV N +    + +++D 
Sbjct: 221 GKRVLDLYTFTGGFALHAAKAGA-LHVTAVDSSAQAIEQAKNNAVLNHL-NTIEFIKADA 278

Query: 158 FSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              ++  G +DV++ +PP +            +++               YR +     +
Sbjct: 279 REYLKMAGEYDVVILDPPKLVPSQKHLQQ--AKNY---------------YRFLHREAFK 321

Query: 216 HLNKDGLCS 224
           ++    L  
Sbjct: 322 YMKPGSLLM 330


>gi|294505249|ref|YP_003569311.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003]
 gi|262367310|gb|ACY63867.1| ribosomal protein L11 methyltransferase [Yersinia pestis D182038]
 gi|294355708|gb|ADE66049.1| ribosomal protein L11 methyltransferase [Yersinia pestis Z176003]
          Length = 266

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 131 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 189

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 190 -DQPAELSADVVVAN 203


>gi|255323419|ref|ZP_05364550.1| ribosomal protein L11 methyltransferase [Campylobacter showae
           RM3277]
 gi|255299456|gb|EET78742.1| ribosomal protein L11 methyltransferase [Campylobacter showae
           RM3277]
          Length = 276

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 17/121 (14%)

Query: 64  RLTLSSDTFEPRPE-TELLVDSALAFSLPRIE------------KRDVVRILDLGTGTGA 110
           +  +     E +     +++D ALAF     E              + +  LD+G G+G 
Sbjct: 98  KFYIHPSWEESKDGFENIIIDPALAFGSGHHESTSACIEYLQKYAANGMSALDVGCGSGI 157

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +AL K          D   +A++ +  NA  NGV  +F+ + +   ++++  +DV+V+
Sbjct: 158 LSIALAKL--GCVTDACDTDEQAVQSSHKNAELNGV--KFNQIWTGSVANLDKKYDVVVA 213

Query: 171 N 171
           N
Sbjct: 214 N 214


>gi|254787373|ref|YP_003074802.1| cyclopropane-fatty-acyl-phospholipid synthase [Teredinibacter
           turnerae T7901]
 gi|237685513|gb|ACR12777.1| cyclopropane-fatty-acyl-phospholipid synthase [Teredinibacter
           turnerae T7901]
          Length = 418

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYN--VRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRD 97
            R+ ++ S H  LG  DF+   +  T+             L D+A   L     +++ + 
Sbjct: 138 KRAKENISAHYDLGN-DFFKVFLDPTMMYSAAIFATPDTTLEDAAVAKLDAICKKLQLKP 196

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++GTG G + +         +     IS +  E  +S     G+ ++   L  D 
Sbjct: 197 ADHLLEIGTGWGGMAIHAASHY-GCRVTTTTISREQFEFTRSKVKALGLDDKITVLLED- 254

Query: 158 FSSVEGLFDVIVS 170
           +  + G +D +VS
Sbjct: 255 YRDLSGRYDKLVS 267


>gi|254477104|ref|ZP_05090490.1| cyclopropane-fatty-acyl-phospholipid synthase [Ruegeria sp. R11]
 gi|214031347|gb|EEB72182.1| cyclopropane-fatty-acyl-phospholipid synthase [Ruegeria sp. R11]
          Length = 401

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 78/214 (36%), Gaps = 26/214 (12%)

Query: 52  HRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY + L    T SS  FE   E+     +A  A  + ++  +    +L++G 
Sbjct: 136 HYDLGN-DFYALWLDDTMTYSSAIFETGQESLEAAQTAKYASMVDQMGVKPGDHVLEVGC 194

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G       +E    +  G+ IS + L+ A+      G+S + +    D +   +G FD
Sbjct: 195 GWGGFAEYAARER-GLRVTGLTISEEQLKFARERIDKAGLSGQVELRMQD-YRDCKGEFD 252

Query: 167 VIVS-------NPPYIESVIVDCLGLEVRDFDPRISL---DGGIDGLSHYRTIADGVSRH 216
            I S          Y  +     +  +      R +L     G      Y+   D + +H
Sbjct: 253 GIASIEMFEAVGEKYWPAYFK--MIRDRLRPGARATLQIITVGDHRWEVYKRGVDFIQKH 310

Query: 217 LNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           +   G+            +    E+  L +V + 
Sbjct: 311 IFPGGML------PAPKILREQVENAGLQIVKSL 338


>gi|212636060|ref|YP_002312585.1| ubiquinone/menaquinone biosynthesis methylase [Shewanella
           piezotolerans WP3]
 gi|212557544|gb|ACJ29998.1| Methylase involved in ubiquinone/menaquinone biosynthesis, putative
           [Shewanella piezotolerans WP3]
          Length = 211

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 36/135 (26%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
             D  R+L+L  G G +   LL   P    +  D++   L +AK N      + + + LQ
Sbjct: 40  PTDDARVLELACGPGNITKMLLSAKPNLSILATDLAPNMLLLAKKN------NPKIEVLQ 93

Query: 155 SD--WFSSVEGLFDVIVS--NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            D    S V   FD I+     PY++                 I+L              
Sbjct: 94  LDSRHLSKVTERFDAIMCGFCLPYLDRDEA-------------IAL-------------I 127

Query: 211 DGVSRHLNKDGLCSV 225
           D  +  LN  G+  +
Sbjct: 128 DAAAERLNPQGVLYL 142


>gi|46580744|ref|YP_011552.1| ribosomal protein L11 methyltransferase [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46450164|gb|AAS96812.1| ribosomal protein L11 methyltransferase, putative [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|311234458|gb|ADP87312.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris RCH1]
          Length = 283

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 28/170 (16%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRLTLSSDTF---------- 72
             L    R FL +A++     E+   +  WR+F+          +               
Sbjct: 54  EALVADVRAFLPDALLDREDVEAADWLASWREFFTPVPVGTHFLVIPPWLRDSAPLEGRM 113

Query: 73  ----EPR-------PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               EP+         T  L    ++        R  +  LDLGTG+G + +        
Sbjct: 114 PIVIEPKTAFGTGHHPTTALCLGVVSQLAAEGRIRAGMSFLDLGTGSGILGIGCALL--G 171

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             G G DI   A+E A  N   NGV+E FD +           FDV+++N
Sbjct: 172 LSGTGTDIDPLAVENADENRHINGVAEAFDVMAGSTEVVRGRTFDVVLAN 221


>gi|108809659|ref|YP_653575.1| ribosomal protein L11 methyltransferase [Yersinia pestis Antiqua]
 gi|108813676|ref|YP_649443.1| ribosomal protein L11 methyltransferase [Yersinia pestis Nepal516]
 gi|145597578|ref|YP_001161654.1| ribosomal protein L11 methyltransferase [Yersinia pestis Pestoides
           F]
 gi|165927551|ref|ZP_02223383.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166214163|ref|ZP_02240198.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167420502|ref|ZP_02312255.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425493|ref|ZP_02317246.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167470297|ref|ZP_02335001.1| ribosomal protein L11 methyltransferase [Yersinia pestis FV-1]
 gi|108777324|gb|ABG19843.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Nepal516]
 gi|108781572|gb|ABG15630.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Antiqua]
 gi|145209274|gb|ABP38681.1| LSU ribosomal protein L11P methyltransferase [Yersinia pestis
           Pestoides F]
 gi|165920445|gb|EDR37722.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166204650|gb|EDR49130.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961308|gb|EDR57329.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167055507|gb|EDR65300.1| ribosomal protein L11 methyltransferase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
          Length = 304

 Score = 56.6 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 169 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 227

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 228 -DQPAELSADVVVAN 241


>gi|332829719|gb|EGK02365.1| type I restriction-modification system, M subunit [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 513

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 13/158 (8%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  +++L     A      +K  V  + D   G+G++ L++ KE       G + + 
Sbjct: 201 YTPQQVSKVLAQIVTA------DKERVRNVYDPTCGSGSLLLSVAKEGFAEFIYGQEKNP 254

Query: 132 KALEIAKSN-AVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPPYIESVIVDCLGLEV 187
               +A+ N  + N   ++F+    D     +    +FD IV+NPP+      D      
Sbjct: 255 TTYNLARMNMLLHNKRYDKFEIRSGDTLEDDQFESEVFDAIVANPPFSAQWSADRKFNTD 314

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             F    +L       + Y  I   +  HL+  G  + 
Sbjct: 315 DRFSRAGALAPKSK--ADYAFILHMIH-HLHDGGTMAC 349


>gi|319791697|ref|YP_004153337.1| ribosomal protein l11 methyltransferase [Variovorax paradoxus EPS]
 gi|315594160|gb|ADU35226.1| ribosomal protein L11 methyltransferase [Variovorax paradoxus EPS]
          Length = 296

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +   K         VDI   A+  ++ NA  NGVS            
Sbjct: 169 RVLDYGCGSGILAIGAAK-FGARDIDAVDIDEAAVSSSRLNAEANGVSLNVG-----LPD 222

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           + +G +D +++N   I +  +  L   +R  
Sbjct: 223 AAKGAYDTVLAN---ILATPLKLLAPLLRSH 250


>gi|283457325|ref|YP_003361899.1| SAM-dependent methyltransferase [Rothia mucilaginosa DY-18]
 gi|283133314|dbj|BAI64079.1| SAM-dependent methyltransferase related to tRNA
           (uracil-5-)-methyltransferase [Rothia mucilaginosa
           DY-18]
          Length = 409

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 12/140 (8%)

Query: 46  LKHESIHRILGWRDF-----YNVRLTLSSDTFEPRPETEL-----LVDSALAFSLPRIEK 95
           L  E + R+ G  +        + + ++  T   RP++       + ++  A     + +
Sbjct: 204 LLREPVARVEGDEEIILSERQTLPMQVNDLTLHLRPQSFFQTNTKVAEAMYAQGREWVRE 263

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQ 154
                + DL  G G   L            G++IS +A+  A+      G+    F    
Sbjct: 264 VAPRSLWDLYCGVGGFALHAASVMDGGSVTGIEISAEAVASAQRTVAEYGLEGVDFSAQD 323

Query: 155 SDWFSSVEGLFDVI-VSNPP 173
           +  F+   G    + V NPP
Sbjct: 324 APEFAVSSGTVPQMLVVNPP 343


>gi|260583861|ref|ZP_05851609.1| SmtA protein [Granulicatella elegans ATCC 700633]
 gi|260158487|gb|EEW93555.1| SmtA protein [Granulicatella elegans ATCC 700633]
          Length = 258

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFD 151
           +     +++LD+GTG G   + +L+E  +   +G+D+S K LE+AK N    G  +   +
Sbjct: 42  LPANKNLKVLDIGTGPGFFTI-ILEELGYTNIMGIDVSEKMLEVAKENIQKYGKKDSSIE 100

Query: 152 TLQSDW--FSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLD 197
            +Q D          FD+IVS N  +            +R   P  +L 
Sbjct: 101 LIQMDAQKLEFKPESFDIIVSRNLTWNLEKPQQAYSEWLRVLKPNGALF 149


>gi|253686937|ref|YP_003016127.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753515|gb|ACT11591.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 379

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  R+   ++ +     +   +D    F +  + ++   +I+DLG G G + LA LK +P
Sbjct: 198 YGYRIQNHANVY-----SRNGLDIGARFFMQHLPEQIDGKIIDLGCGNGVIGLAALKANP 252

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPY 174
                  D S  A+  ++ N   N   +  R   + +   + V+      ++ NPP+
Sbjct: 253 EATVGFFDESYMAVASSQVNVEVNCPQDVERCSFVVNHGLARVKRDTLQAVLCNPPF 309


>gi|16077741|ref|NP_388555.1| RNA methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308510|ref|ZP_03590357.1| hypothetical protein Bsubs1_03798 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312833|ref|ZP_03594638.1| hypothetical protein BsubsN3_03754 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317757|ref|ZP_03599051.1| hypothetical protein BsubsJ_03708 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322036|ref|ZP_03603330.1| hypothetical protein BsubsS_03794 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|50401309|sp|O31503|YEFA_BACSU RecName: Full=Uncharacterized RNA methyltransferase yefA
 gi|2632987|emb|CAB12493.1| putative RNA methyltransferase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 459

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG +         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGNTNAEFAVGEAETVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GITADTLVVDPP 390


>gi|298208825|ref|YP_003717004.1| hypothetical protein CA2559_11313 [Croceibacter atlanticus
           HTCC2559]
 gi|83848752|gb|EAP86621.1| hypothetical protein CA2559_11313 [Croceibacter atlanticus
           HTCC2559]
          Length = 411

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 26/139 (18%)

Query: 94  EKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           E      +LD+ +  G   + AL K +       +DIS +AL +AK NA  N        
Sbjct: 234 ELSKGKSVLDVFSYAGGFSVHALAKGAKD--VTSLDISAQALAVAKENATLNDHKGTHHI 291

Query: 153 LQSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           ++ D F  ++        FDV+V +PP       D                     L  Y
Sbjct: 292 IEGDAFEKLQQLIQKNRKFDVVVIDPPSFAKKATDV-----------------EKALKKY 334

Query: 207 RTIADGVSRHLNKDGLCSV 225
             +A    + ++K+G+  +
Sbjct: 335 AQLAKMGVQVVSKNGILVL 353


>gi|23015683|ref|ZP_00055452.1| COG4106: Trans-aconitate methyltransferase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 243

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 26/153 (16%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
            +  I D+G G G    AL    P  +  G ++S  A+  A+           F+     
Sbjct: 70  PLDSIADMGCGLGLTAGALADAFPNARVDGYELSPDAVSFARR----RFPKANFECRAIG 125

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
             + +   FD+I+    Y  +   D                     L  +      +  H
Sbjct: 126 RDNDLGRRFDLILCQEFYPFTRTSD---------------------LDTHAEFLTVLRHH 164

Query: 217 LNKDGLCSVEIGY-NQKVDVVRIFESRKLFLVN 248
           L   G   +E+   +    ++   E    F + 
Sbjct: 165 LTDHGCLIIELSERDFGTSILCNLERLSGFRIE 197


>gi|292659105|gb|ADE34487.1| SsfM3 [Streptomyces sp. SF2575]
          Length = 349

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 62/190 (32%), Gaps = 46/190 (24%)

Query: 57  WRDFYNVRLTLSS-----DTFEPRPETELLVDSALAFS--------------LPRIEKRD 97
           W+ F  +  T+ S     D     P+    +D A   +               P   + +
Sbjct: 111 WKVFGRLTETVRSGEPFTDVDAHEPDFPFWIDFAEHPTPASARGALMIAEALQPWYGELE 170

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ILD G G+G   L L  + P  +    D     L++A+ +A    +++R      D 
Sbjct: 171 APEILDAGCGSGTFGLTLAAQHPRGRVTLQDW-PAVLQVAEGHAKVQDLADRITLAPGDI 229

Query: 158 FSS--VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           F      G +DV+V+             G  +  FDP  +             +   ++ 
Sbjct: 230 FGDGLTGGPYDVVVA-------------GNLLFLFDPERA-----------AALVRRLAG 265

Query: 216 HLNKDGLCSV 225
            L   G   +
Sbjct: 266 ALKPGGRLVI 275


>gi|293370404|ref|ZP_06616958.1| methyltransferase domain protein [Bacteroides ovatus SD CMC 3f]
 gi|292634552|gb|EFF53087.1| methyltransferase domain protein [Bacteroides ovatus SD CMC 3f]
          Length = 255

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 27/141 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L F    + K    RIL+L  GTG + L + K+     GV    S   L  AK  A   G
Sbjct: 27  LQFYKRWLPKNKDARILELCCGTGRLTLPIAKDGYDISGVDYTAS--MLHQAKMKAAEAG 84

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R + +Q+D  +  ++  +D+I     +I    +  L      ++             
Sbjct: 85  L--RINFIQADIRTLDLQKKYDLI-----FIPFNSIHHL------YEN-----------E 120

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               +   V  HL   GL  +
Sbjct: 121 DLFKVLHVVKNHLKDGGLFLL 141


>gi|260902432|ref|ZP_05910827.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AQ4037]
 gi|308110659|gb|EFO48199.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AQ4037]
          Length = 418

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    ++++GTG GA+ + +  E    +     IS +  E A+   V  G
Sbjct: 190 MERLCQQLDLQSTDHVIEIGTGWGAMAIYMA-EQYGCRVTTTTISEEQHEYARQQIVQRG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R   L+ D + ++ G +D +VS    IE+V    L   ++  +  +       GL  
Sbjct: 249 LADRITLLKED-YRNLTGTYDKLVS-IEMIEAVGKQFLASYIKKCESLL----KPSGLMA 302

Query: 206 YRTI-------------ADGVSRHLNKDGLC 223
            + I              D + +++   G  
Sbjct: 303 IQAITIADQRYDYYSNNVDFIQKYIFPGGFL 333


>gi|255021278|ref|ZP_05293327.1| LSU m5C1962 methyltransferase RlmI [Acidithiobacillus caldus ATCC
           51756]
 gi|254969289|gb|EET26802.1| LSU m5C1962 methyltransferase RlmI [Acidithiobacillus caldus ATCC
           51756]
          Length = 432

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 25/131 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDL +  G   L L +     + + VD S  AL + + NA  NG+S +    + +   
Sbjct: 225 RVLDLFSYLGGFALPLARAGA-VEVLAVDRSASALALLEENARRNGLS-QVHGHEGEALE 282

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           ++  L      FD+I+ +PP +     D     VR            DG + Y  + D  
Sbjct: 283 TLRQLRDRAESFDLILLDPPALIKSRKD-----VR------------DGTAAYARLNDLA 325

Query: 214 SRHLNKDGLCS 224
            R L  DGL  
Sbjct: 326 LRLLRPDGLLF 336


>gi|238487596|ref|XP_002375036.1| TAM domain methyltransferase, putative [Aspergillus flavus
           NRRL3357]
 gi|220699915|gb|EED56254.1| TAM domain methyltransferase, putative [Aspergillus flavus
           NRRL3357]
          Length = 331

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 41/145 (28%), Gaps = 31/145 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              L+       L         RILD+GTG+G   + +    P  + +G D+S       
Sbjct: 62  QHHLIKMVNGGRLFFAPLEHPKRILDIGTGSGIWPIEMAPIFPEAEIIGTDLSP------ 115

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
                 N V E    L  D         D  +  P + + +    +   +  F       
Sbjct: 116 ---VQPNEVPENVHFLVDDATE------DEWLWGPDHFDLIHTGHMSGSLPSF------- 159

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGL 222
                    + +      HL   G 
Sbjct: 160 ---------KELLRKALNHLKPGGY 175


>gi|168466499|ref|ZP_02700361.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195630967|gb|EDX49553.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 376

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|153838279|ref|ZP_01990946.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AQ3810]
 gi|149748334|gb|EDM59193.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio
           parahaemolyticus AQ3810]
          Length = 417

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 62/151 (41%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    ++++GTG GA+ + +  E    +     IS +  E A+   V  G
Sbjct: 189 MERLCQQLDLQSTDHVIEIGTGWGAMAIYMA-EQYGCRVTTTTISEEQHEYARQQIVQRG 247

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R   L+ D + ++ G +D +VS    IE+V    L   ++  +  +       GL  
Sbjct: 248 LADRITLLKED-YRNLTGTYDKLVS-IEMIEAVGKQFLASYIKKCESLL----KPSGLMA 301

Query: 206 YRTI-------------ADGVSRHLNKDGLC 223
            + I              D + +++   G  
Sbjct: 302 IQAITIADQRYDYYSNNVDFIQKYIFPGGFL 332


>gi|157961009|ref|YP_001501043.1| 23S rRNA 5-methyluridine methyltransferase [Shewanella pealeana
           ATCC 700345]
 gi|226725390|sp|A8H1S1|RUMA_SHEPA RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|157846009|gb|ABV86508.1| RNA methyltransferase, TrmA family [Shewanella pealeana ATCC
           700345]
          Length = 445

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 19/129 (14%)

Query: 56  GWRDFY-----NVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           G + FY     +++L  S   F     P  + +V  A+ +  P    +   R+LDL  G 
Sbjct: 255 GEQPFYALSGSDIKLNFSPGNFIQVNGPVNQAMVSQAVEWLSP----KAGERVLDLFCGI 310

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----G 163
           G   L L K+    + +GV+     +E A+ NA  +G+ ++     +D  + +      G
Sbjct: 311 GNFSLPLAKD--GAEVIGVEGVVAMVEQARVNAKQSGL-DKVAFYHADLSADLSKEPWLG 367

Query: 164 LFDVIVSNP 172
             D ++ +P
Sbjct: 368 KVDKMLIDP 376


>gi|87200605|ref|YP_497862.1| cyclopropane-fatty-acyl-phospholipid synthase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87136286|gb|ABD27028.1| cyclopropane-fatty-acyl-phospholipid synthase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 424

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 85  ALAFSLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           AL  +  R+E    + +R+LD+G G G + L L +     + +GV ++   +  A+  A 
Sbjct: 164 ALIAAKLRLEPGRAEGMRVLDIGCGWGGLALYLNRHF-GCEVLGVSLAPDQIRFAQERAE 222

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             GV+++      D +  VEG FD I S
Sbjct: 223 AAGVADKVKFQLID-YRDVEGQFDRITS 249


>gi|313679199|ref|YP_004056938.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase;
           demethylmenaquinone methyltransferase [Oceanithermus
           profundus DSM 14977]
 gi|313151914|gb|ADR35765.1| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase;
           demethylmenaquinone methyltransferase [Oceanithermus
           profundus DSM 14977]
          Length = 234

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 52/145 (35%), Gaps = 27/145 (18%)

Query: 82  VDSALAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           VD        R+  ++   RILD+ TGTG V L L +  P  + VG D + + LE+A++ 
Sbjct: 33  VDQRWRRLAVRLATEKAPRRILDVATGTGDVALLLKRARPEAEVVGGDFTPQMLELARAK 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A   G+  RF    +      +  FD +              +    R+F          
Sbjct: 93  AERAGLDVRFVEADALALPFADASFDAV-------------TVAFGFRNF---------- 129

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
              + Y        R L   G   +
Sbjct: 130 ---ADYERGLAEFYRVLAPGGRAVI 151


>gi|299473590|emb|CBN77985.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 358

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 43/228 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNV----RLT 66
           L  +   +S + +   ++++   +   +  A  +   +E          FY++    RL 
Sbjct: 42  LQDIARGTSVEQLARKEALI--EELKKMPIATQQDAANE--QHYEVNAAFYHLALGPRLK 97

Query: 67  LSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            SS  +     T    + A L     R +  D ++I+DLG G G++ L L ++ P     
Sbjct: 98  YSSGFWPKSDSTFEESEVAMLEMYCDRAKLEDGMKIVDLGCGWGSLTLFLAEKYPNASIT 157

Query: 126 GVDISCKALE------IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
              IS  A +        +     N      D  + D     +G FD ++S         
Sbjct: 158 --SISNSASQKTYIDGQCRERGFGNVRVITGDINEFDLGEEDKGSFDRVMS--------- 206

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                +E+ +             + +Y+ +   +S  L+  G   V I
Sbjct: 207 -----IEMFEH------------MKNYKLLIAKISGWLSPGGKLFVHI 237


>gi|327349168|gb|EGE78025.1| DUF890 domain-containing protein [Ajellomyces dermatitidis ATCC
           18188]
          Length = 461

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 23/165 (13%)

Query: 57  WRDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRI-EKRDVVRI---LDLGTGT 108
            RDF ++ L L SD   P    R    L +   L  +  +  +  D  R    LD+GTG 
Sbjct: 51  KRDF-DLHLDLPSDRLCPPVPNRFNYILWLQDLLDSTSEKYSDGYDQERDVFGLDIGTGA 109

Query: 109 GAV--CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----- 161
             +   L  +   P +K    DI  K L+ A+ N   N +  R   ++S   +++     
Sbjct: 110 SCIYPQLGCVL-RPKWKFAATDIDEKNLKYARDNVQRNKLDSRIQIVESSPSTALIPLGE 168

Query: 162 ------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                     D  + NPP+ ES        + +   P  +  G  
Sbjct: 169 IGLPESNARLDFTMCNPPFYESRDELISAAKAKQRPPFSACTGAE 213


>gi|326520792|dbj|BAJ92759.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 260

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 69/174 (39%), Gaps = 12/174 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F +  +T S   F+   E+  +     L+  + + + +    +LD+G+G G++ +  +K+
Sbjct: 58  FLDKSMTYSCAVFKMENESLEVAQQRKLSLLINKAKIKRGDHVLDIGSGWGSLAIQAVKQ 117

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
           +   K  GV +S +  + A+      G+ +    L  D+       +D I+S    IE V
Sbjct: 118 T-GCKYTGVTLSAEQHKYAERKVREAGLEDHITFLLCDYRQIPPCKYDAIISC-GMIEHV 175

Query: 179 IVDCLGLEVRDFDPRISLDG---------GIDGLSHYRTIADGVSRHLNKDGLC 223
             + +       +  ++ DG           +    YR   D +  ++   G  
Sbjct: 176 GHEYMDAFFACCESYLAEDGILVLQFISAPEERYEQYRRRTDFIKEYIFPGGCL 229


>gi|296204580|ref|XP_002749375.1| PREDICTED: methyltransferase-like protein 5-like [Callithrix
           jacchus]
          Length = 183

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   I DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIENKVIADLGCGCGVLSIGSAMLGAGLCV-GFDIDEDALEIFNRNVEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMIQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|296171937|ref|ZP_06852982.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295893870|gb|EFG73642.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 249

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 12/126 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +      D   P+P  + LV  AL              +LD GTG G   +    +   
Sbjct: 24  GLPTATPWDIGGPQPVVQQLV--ALGAIR--------GEVLDPGTGPGHHAIYYAAKGYS 73

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
               G+D S  ALE A+ NA   GVS  F+   +     +EG FD +V    Y       
Sbjct: 74  A--TGIDGSPGALERARENARRAGVSVNFELADATRLEGLEGRFDTVVDCAFYHTFSTEP 131

Query: 182 CLGLEV 187
            L    
Sbjct: 132 ELQRSY 137


>gi|145637282|ref|ZP_01792943.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|145640648|ref|ZP_01796231.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145269534|gb|EDK09476.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           PittHH]
 gi|145274574|gb|EDK14437.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae
           22.4-21]
          Length = 295

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     S+    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSNE-KP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 SDLKADVVVAN 230


>gi|6572625|gb|AAF17327.1|AF139345_1 microcystin synthetase [Microcystis sp. UWOCC F]
          Length = 440

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|194097642|ref|YP_002000680.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|291044650|ref|ZP_06570359.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|193932932|gb|ACF28756.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           NCCP11945]
 gi|291011544|gb|EFE03540.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
          Length = 311

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 178 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDS 236

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 237 L----PQGQFDVVVAN 248


>gi|167550411|ref|ZP_02344168.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205324510|gb|EDZ12349.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
          Length = 375

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|146283595|ref|YP_001173748.1| ribosomal protein L11 methyltransferase [Pseudomonas stutzeri
           A1501]
 gi|145571800|gb|ABP80906.1| ribosomal protein L11 methyltransferase [Pseudomonas stutzeri
           A1501]
          Length = 320

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 33/186 (17%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDR--QRFFLTNAIVRSLKHESIHRILGWRD 59
           +A  D  + L  +  L    +      V++D+  +R ++ N                   
Sbjct: 88  EADTDPDALLAHLQLLRGGDLPEHQTEVIEDQDWERSWMDNFQPMR-------------- 133

Query: 60  FYNVRLTLSSDTFEPRPE-TELLVDSALAF----------SLPRIEKR--DVVRILDLGT 106
           F +    + S    P P+   LL+D  LAF           L  ++ +  D   +LD G 
Sbjct: 134 FGHRLWIVPSWHAAPEPDAVNLLLDPGLAFGTGTHPTTALCLEWLDAQTLDDRSLLDFGC 193

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF 165
           G+G + +A L      + VG DI  +ALE ++ NA  NG++ ERF     +     +   
Sbjct: 194 GSGILAIAGLLLGAR-QAVGTDIDPQALEASRDNAERNGIAPERFTLYLPEQLP--QEPA 250

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 251 DVVVAN 256


>gi|291408093|ref|XP_002720421.1| PREDICTED: TRM2 tRNA methyltransferase 2 homolog B isoform 2
           [Oryctolagus cuniculus]
          Length = 459

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 45  SLKHE--SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G    +     +++ +S D F    +        L  ++  +   + 
Sbjct: 243 RCSHQQSPYQLLFGEPYIFEGLLGLKIRISPDAFF---QVNTAGAEMLYQTVGELSGVNA 299

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             IL D+  GTGA+ L+L + +   + +G+++  +A+E A+  A  NG++       R +
Sbjct: 300 NTILLDICCGTGAIGLSLAQHA--SQVLGIELVEQAVEDARWTAAFNGITNCEFHAGRAE 357

Query: 152 TLQSDWFSSVEGLFDVI-VSNPP 173
            +      S EG+  V+ V NPP
Sbjct: 358 KILPWLLKSKEGVQPVVAVVNPP 380


>gi|261403215|ref|YP_003247439.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
 gi|261370208|gb|ACX72957.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
          Length = 378

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL+ A+ N   N +  ++++ ++
Sbjct: 203 KEGDRVLDVCCYTGGFSVHAAIR--GAEVVGVDLSKKALKTAEENMELNNIPKDKYEFIE 260

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIV 180
            + F  +E        FDV++ +PP       
Sbjct: 261 GNAFKIMEEFIEDGERFDVVILDPPAFAQTEK 292


>gi|238920083|ref|YP_002933598.1| cobalt-precorrin-6Y C(15)-methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|238869652|gb|ACR69363.1| precorrin-6Y C5,15-methyltransferase [Edwardsiella ictaluri 93-146]
          Length = 189

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L ++E      ++D+G GTG+V +    + P  +   ++ +  AL + + N  
Sbjct: 17  EAVRALALSKLELHRASHLIDIGAGTGSVSIEAALQFPSLRVTAIEKNPAALRLLEENRR 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                     L       V    D +  
Sbjct: 77  RFACG-NVRILPGSAPMPVAERADAVFM 103


>gi|51591148|emb|CAH22813.1| ribosomal protein L11 methyltransferase [Yersinia
           pseudotuberculosis IP 32953]
          Length = 304

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   ++D G G+G + +A   +    + +G+DI  +A++ ++ NA  NGVSER +   + 
Sbjct: 169 NGKTLIDFGCGSGILAIA-ALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAK 227

Query: 157 WFSSVEGLFDVIVSN 171
                E   DV+V+N
Sbjct: 228 -DQPAELSADVVVAN 241


>gi|51245141|ref|YP_065025.1| putative SAM-dependent methyltransferase [Desulfotalea psychrophila
           LSv54]
 gi|81642445|sp|Q6ANQ6|RLMF_DESPS RecName: Full=Ribosomal RNA large subunit methyltransferase F;
           AltName: Full=23S rRNA mA1618 methyltransferase;
           AltName: Full=rRNA adenine N-6-methyltransferase
 gi|50876178|emb|CAG36018.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 309

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 11/131 (8%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
             +      +      P    R +    +   LA  LP   K   +R+LD+GTG   +  
Sbjct: 69  HYYQVSNWQIPEGYLCPPIPGRADYIHYLADLLAEDLPTSAKGKKIRVLDIGTGANCIYP 128

Query: 114 ALLKESPFFKGVGVDISCKALEIA----KSNAVTNG-VSERFDTLQSDWFSSV--EGLFD 166
            +  +S  +  VG DI   A++IA    ++N+  NG ++ +    +   F  +  E  FD
Sbjct: 129 IIGSQSYGWHFVGTDIDPLAIKIAGMIVQANSCLNGKITLKQQLDKKLIFKGIINEDKFD 188

Query: 167 VIVSNPPYIES 177
           + + NPP+  S
Sbjct: 189 LTMCNPPFHAS 199


>gi|294667350|ref|ZP_06732569.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292602902|gb|EFF46334.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 431

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 188 LERICQKLRLAPHHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELANQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R   L  D +  +EG FD +VS
Sbjct: 247 LSDRVTVLLRD-YRDLEGCFDRVVS 270


>gi|239623795|ref|ZP_04666826.1| pantetheine-phosphate adenylyltransferase [Clostridiales bacterium
           1_7_47_FAA]
 gi|239521826|gb|EEQ61692.1| pantetheine-phosphate adenylyltransferase [Clostridiales bacterium
           1_7_47FAA]
          Length = 185

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++      P+I      + LDL +G+GA+ +  L        +  + + +A+
Sbjct: 22  RPTTDRIKETLFNMLQPQI---PGCQFLDLFSGSGAIGIEALSRGADLAVMIEN-NPQAV 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVR 188
              + N  T  + ER   +  D  + ++        FD++  +PPY        LG    
Sbjct: 78  ACIRENLGTTRLEERAVVMACDVLTGLKRLEGHNYRFDLVFMDPPYHHGYEEQVLG--YL 135

Query: 189 DFDP 192
              P
Sbjct: 136 AHSP 139


>gi|154685168|ref|YP_001420329.1| YefA [Bacillus amyloliquefaciens FZB42]
 gi|154351019|gb|ABS73098.1| YefA [Bacillus amyloliquefaciens FZB42]
          Length = 464

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYKE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GITADTLVVDPP 390


>gi|52549034|gb|AAU82883.1| predicted methyltransferase [uncultured archaeon GZfos22D9]
          Length = 367

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           ++E      I+D+  G G+  + + K +P      +DI+  A+     N   NGV    +
Sbjct: 184 QVELSKNELIIDMFAGVGSFSIQIAKRAPQSIVTAIDINPDAIRYLHENMELNGVR-NIE 242

Query: 152 TLQSD---WFSSVEGLFDVIVSNPP 173
            ++ D    +   E   + I+ N P
Sbjct: 243 PIEGDVSGIYMKFENKANRIIMNLP 267


>gi|45190843|ref|NP_985097.1| AER240Wp [Ashbya gossypii ATCC 10895]
 gi|44983885|gb|AAS52921.1| AER240Wp [Ashbya gossypii ATCC 10895]
          Length = 390

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 39/170 (22%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSD-- 156
           R+L+LG GTG V +A    +     V V    + +   + N   N + + R   L     
Sbjct: 231 RVLELGAGTGLVGIAYALANIDADDVFVTDLPEIVPNLRHNLALNNLTNVRASVLDWSDP 290

Query: 157 ---WFSSVEGLFDVI-VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
                   E  FD I V++P Y  +              P++              +   
Sbjct: 291 TSFLHEHGELQFDAIFVADPIYSPNH-------------PQL--------------LVQT 323

Query: 213 VSRHLNKDGLCSVEIGYNQKVDVVR-----IFESRKLFLVNAFKDYGGND 257
           V+R L   G   +EI    +    R     +  +  L ++   +D G +D
Sbjct: 324 VARFLAPAGTLYLEIPIRAQYATERRLLWDLLAAHHLKVICTEEDRGNDD 373


>gi|298706546|emb|CBJ29516.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 225

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDLG GTG + +A          VG+D+   AL  A  NA +  +   F          
Sbjct: 57  VLDLGCGTGMLGIAAGILGAGA-VVGLDVDSGALSAAAENAESMEIGMDFVCCDVARNPC 115

Query: 161 VEGLFDVIVSNPPY 174
           +   FD ++ NPP+
Sbjct: 116 IPERFDTVLMNPPF 129


>gi|302420553|ref|XP_003008107.1| methyltransferase [Verticillium albo-atrum VaMs.102]
 gi|261353758|gb|EEY16186.1| methyltransferase [Verticillium albo-atrum VaMs.102]
          Length = 342

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 30/143 (20%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +L +D AL  +   +     + ILD+G GTGA  +A+  + P     GVD+S   L  A 
Sbjct: 72  QLCLDGALTSARLPVPTGRPLSILDIGAGTGAWAIAMAAQHPTASIRGVDVSAALLPTA- 130

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                  V        SD              N P+  +  +    + VR+      L G
Sbjct: 131 -------VPPNVVFEVSDV-------------NEPW-AAQPLSLDFVHVRN------LVG 163

Query: 199 GIDGLSHYRTIADGVSRHLNKDG 221
           G  G+  ++ +     +HL   G
Sbjct: 164 G--GVRDFKALYAQAFQHLRPGG 184


>gi|194705956|gb|ACF87062.1| unknown [Zea mays]
 gi|195638364|gb|ACG38650.1| S-adenosylmethionine-dependent methyltransferase [Zea mays]
          Length = 211

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +           + D G G G + +A          +G+DI  ++LE+A+ NA   
Sbjct: 36  MLYMAENSFNDITGKVVADFGCGCGTLAVASALLDAE-HVLGIDIDPQSLELAQENAADL 94

Query: 145 GVSERFDTLQSDWFS-SVEG-LFDVIVSNPPYIESVIVDCLG 184
            +    D + SD  + +++G   D +V NPP+        + 
Sbjct: 95  ELD--IDLVWSDIKNLNLKGVHVDTVVMNPPFGTRRNGADME 134


>gi|320539410|ref|ZP_08039079.1| methylase for 50S ribosomal subunit protein L11 [Serratia
           symbiotica str. Tucson]
 gi|320030535|gb|EFW12545.1| methylase for 50S ribosomal subunit protein L11 [Serratia
           symbiotica str. Tucson]
          Length = 293

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER      + 
Sbjct: 159 GKTVIDFGCGSGILAIAALKLGAE-RAIGIDIDPQAIQASRDNAQRNGVSERLALYLPN- 216

Query: 158 FSSVEGLFDVIVSN 171
               E L DV+V+N
Sbjct: 217 DQPAELLADVVVAN 230


>gi|322433866|ref|YP_004216078.1| hypothetical protein AciX9_0224 [Acidobacterium sp. MP5ACTX9]
 gi|321161593|gb|ADW67298.1| hypothetical protein AciX9_0224 [Acidobacterium sp. MP5ACTX9]
          Length = 423

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 26/132 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN-GVSERFDTLQSDWF 158
           R LD+ T  G   L L +     +  GVD S  ALE+A +N   N  +  R D +++D F
Sbjct: 251 RALDVCTYQGGFALHLAQTCD--RVTGVDTSRAALEVADANLALNPHLKARTDWMEADAF 308

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD IV +PP                   + +L+G + G   Y+ +   
Sbjct: 309 DLLREYESTGERFDTIVLDPPAFAKS--------------QRALEGALRG---YKELNLR 351

Query: 213 VSRHLNKDGLCS 224
             + LN  G   
Sbjct: 352 ALKMLNPGGTLV 363


>gi|294339085|emb|CAZ87437.1| putative S-adenosyl-L-methionine-dependent methyltransferase
           [Thiomonas sp. 3As]
          Length = 194

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 19/153 (12%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA---LEIAKS 139
           D      + RIE      +L+LG+G+GA+C A        + V VD+  +A   L+ A+ 
Sbjct: 37  DEVSHSLIERIEVSKPKVVLELGSGSGALCSAAASRWHDARLVTVDVDRQAPKRLD-AEH 95

Query: 140 NAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           N  +   S        +  S       G  DV V NPPYI        G  + D     +
Sbjct: 96  NGPSLKHSHFVHDALDEALSDKIGLRLGTVDVAVCNPPYIRPRWRSDFGKILEDAGLSGA 155

Query: 196 L----DGGIDGLSHYRTIADGVSRHLNKD--GL 222
           L    D G D L           R L ++  G 
Sbjct: 156 LASLRDAGADLL-----FLAQNLRLLRRNAKGW 183


>gi|161528965|ref|YP_001582791.1| methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
 gi|160340266|gb|ABX13353.1| Methyltransferase type 11 [Nitrosopumilus maritimus SCM1]
          Length = 344

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 28/146 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LV   L       +    +++LD+G G+G A+ L + K  P     G D S +A++ AK+
Sbjct: 146 LVKEILPLIPTYEKLHSGLKVLDVGCGSGRAINL-MAKSFPNSHFTGYDFSSEAIQNAKN 204

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            A   G+S      Q       E  FDVI +        I D    +             
Sbjct: 205 EAQKLGLSNVTFEKQDAANFDSENSFDVITA-----FDAIHDQANPD------------- 246

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    + + + + L  DG+  +
Sbjct: 247 --------KVLENIKKALKPDGIFMM 264


>gi|89094593|ref|ZP_01167531.1| ribosomal protein L11 methyltransferase [Oceanospirillum sp. MED92]
 gi|89081192|gb|EAR60426.1| ribosomal protein L11 methyltransferase [Oceanospirillum sp. MED92]
          Length = 298

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 30/184 (16%)

Query: 7   SHSFLCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSL---KHESIHRILGWRDFYN 62
           +   L      +      + PD  L   +   L +          +  +         + 
Sbjct: 62  AEHNLEETLEQIKQGHYTLFPDQTLPQIKAEILEDKDWEREWMENYHPMQ--------FG 113

Query: 63  VRLTLSSDTFE-PRPETELLV-------------DSALAFSLPRIEKRDVVRILDLGTGT 108
            RL +     E P PE   L+              +AL       +K D   I+D G G+
Sbjct: 114 KRLWVCPSWREAPEPEAVNLMLDPGLAFGTGTHPTTALCLEWLDAQKLDDHYIIDYGCGS 173

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDV 167
           G + +A L      + +G+DI  +AL+  K N   N + S+  +    +         D 
Sbjct: 174 GILGIAALLLGAK-QAIGIDIDPQALQATKDNLQRNKLSSDSLEVFMPE--DQPSEQADT 230

Query: 168 IVSN 171
           +V+N
Sbjct: 231 LVAN 234


>gi|88857384|ref|ZP_01132027.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
           tunicata D2]
 gi|88820581|gb|EAR30393.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudoalteromonas
           tunicata D2]
          Length = 427

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 64/185 (34%), Gaps = 25/185 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    ++  +    ++++GTG GA+ +         K     IS    E A +     G
Sbjct: 186 LALICDKLALKPTDHLIEIGTGWGALAIFAASHY-GCKVTTTTISDAQYEWAAAEVKRLG 244

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG--- 202
           ++++   L+ D +  + G +D +VS    IE +           F+   SL    DG   
Sbjct: 245 LNDKITLLKQD-YRLLSGQYDKLVS----IEMIEAVGHEFMAGFFNKCNSLL-KDDGTML 298

Query: 203 ----------LSHYRTIADGVSRHLNKDGLC----SV-EIGYNQKVDVVRIFESRKLFLV 247
                       HYR   D + +++   G       + E    Q   ++   E   L   
Sbjct: 299 IQAITIADQRYHHYRKNVDFIQKYIFPGGCLPSIAVMSEHIAQQTNMMIDNIEDIGLHYA 358

Query: 248 NAFKD 252
               D
Sbjct: 359 RTLHD 363


>gi|328465537|gb|EGF36766.1| O-methyltransferase [Listeria monocytogenes 1816]
          Length = 217

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            ++R   L +D     E     G FD I
Sbjct: 100 ANDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|327275646|ref|XP_003222584.1| PREDICTED: putative methyltransferase METT10D-like [Anolis
           carolinensis]
          Length = 559

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 25/182 (13%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + +++ +  +   P    R      V+  +A       K  V+  +D+GTG   +   L 
Sbjct: 64  FGLQIDIPLERLIPTVPLRLNYIHWVEDLIAQQ-ETAAKDSVIWGIDIGTGASCIYPLLG 122

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL----QSDWFSSVEGL----FDVI 168
                +  +  ++       AK N   N +S+    +    ++    ++E      +D  
Sbjct: 123 ATLNGWYFIATEVDDVCFSYAKKNVEQNNLSDLIKVVKVPQKTLLLDALEEKSEVIYDFC 182

Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GVSRH 216
           + NPP+  +            R   P     GG      +G  L   + I      + + 
Sbjct: 183 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKR 242

Query: 217 LN 218
           L 
Sbjct: 243 LR 244


>gi|293391551|ref|ZP_06635885.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952085|gb|EFE02204.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 294

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 158 QGKTVIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 E-RPSDLNADVVVAN 230


>gi|261868733|ref|YP_003256655.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261414065|gb|ACX83436.1| ribosomal protein L11 methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 294

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     SD
Sbjct: 158 QGKTVIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLCLSD 216

Query: 157 WFSSVEGLFDVIVSN 171
                +   DV+V+N
Sbjct: 217 E-RPSDLNADVVVAN 230


>gi|255326644|ref|ZP_05367720.1| 23S rRNA-methyltransferase RumB [Rothia mucilaginosa ATCC 25296]
 gi|255295861|gb|EET75202.1| 23S rRNA-methyltransferase RumB [Rothia mucilaginosa ATCC 25296]
          Length = 377

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 13/178 (7%)

Query: 8   HSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF-----YN 62
              +  V       V +         Q   L    V  L  E + R+ G  +        
Sbjct: 135 ELMVRFVLRSKKLLVPIRRQMDWLQEQLPNLAVLSVNLL-REPVARVEGDEEIILSERQT 193

Query: 63  VRLTLSSDTFEPRPETEL-----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           + + ++  T   RP++       + ++  A     + +     + DL  G G   L    
Sbjct: 194 LPMQVNDLTLHLRPQSFFQTNTKVAEAMYAQGREWVREVAPRSLWDLYCGVGGFALHAAS 253

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVI-VSNPP 173
                   G++IS +A+  A+      G+    F    +  F+   G    + V NPP
Sbjct: 254 VMDGGSVTGIEISAEAVASAQRTVAEYGLEGVGFSAQDAPEFAVSSGTVPQMLVVNPP 311


>gi|221211416|ref|ZP_03584395.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD1]
 gi|221168777|gb|EEE01245.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD1]
          Length = 406

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I      R+LD+G G GA+ L   ++    + VGV +S    ++A       G
Sbjct: 158 IDHILTKIRLEPGQRLLDIGCGWGALVLRAAQKF-GAQCVGVTLSQNQFDLATERVKAAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R +    D +  +EG FD I S
Sbjct: 217 LQDRIEIRLQD-YREIEGQFDRITS 240


>gi|198453432|ref|XP_001359198.2| GA16116 [Drosophila pseudoobscura pseudoobscura]
 gi|198132356|gb|EAL28342.2| GA16116 [Drosophila pseudoobscura pseudoobscura]
          Length = 479

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD   G G   +         + + VDI  + L +AK NA   GV+++ + + +D+   
Sbjct: 304 ILDAFCGCGGNAIQFALTCG--RVIAVDIDAEKLAMAKHNATIYGVADKIEFIHADFLQF 361

Query: 161 VEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                   DV+  +PP+           ++   +  +   G    +   R +AD VS  L
Sbjct: 362 APSTRLRPDVVFFSPPWGGPSYQKLATFDI---EESLLPVGASHLMQLGRRLADNVSFFL 418


>gi|195152013|ref|XP_002016933.1| GL21793 [Drosophila persimilis]
 gi|194111990|gb|EDW34033.1| GL21793 [Drosophila persimilis]
          Length = 479

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ILD   G G   +         + + VDI  + L +AK NA   GV+++ + + +D+   
Sbjct: 304 ILDAFCGCGGNAIQFALTCG--RVIAVDIDAEKLAMAKHNATIYGVADKIEFIHADFLQF 361

Query: 161 VEG---LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                   DV+  +PP+           ++   +  +   G    +   R +AD VS  L
Sbjct: 362 APSTRLRPDVVFFSPPWGGPSYQKLATFDI---EESLLPVGASHLMQLGRRLADNVSFFL 418


>gi|169334269|ref|ZP_02861462.1| hypothetical protein ANASTE_00667 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258986|gb|EDS72952.1| hypothetical protein ANASTE_00667 [Anaerofustis stercorihominis DSM
           17244]
          Length = 315

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 37/158 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    ++D+G G+G + +A   +       GVDI    +E +   +  N V ++FD    
Sbjct: 177 KGGEDVIDVGCGSGILSIA-AVKLGSSHVTGVDIDPMCIETSSYLSKINHVEDKFDVFIG 235

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D    V+   D+IV+N                        +          + +    +R
Sbjct: 236 DLAEKVDIKADIIVAN------------------------IFAH-----IIKRLTPDTNR 266

Query: 216 HLNKDGLC----SVEIGYNQKVDVVRIFESRKLFLVNA 249
            L K G+      +E        VV  ++     ++  
Sbjct: 267 ILKKGGIFISSGIIE---ETVDTVVESYKENNFEILEV 301


>gi|110678605|ref|YP_681612.1| ribosomal RNA small subunit methyltransferase C, putative
           [Roseobacter denitrificans OCh 114]
 gi|109454721|gb|ABG30926.1| ribosomal RNA small subunit methyltransferase C, putative
           [Roseobacter denitrificans OCh 114]
          Length = 316

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 75/240 (31%), Gaps = 45/240 (18%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILG----- 56
           +A +D+ + + +     +  VI+D      D     L +   R      I +  G     
Sbjct: 64  RAKKDARALIAQAMAPGAEMVIIDGQK--TDGIDSILRDMRKRVEVSAPISKAHGKLFWC 121

Query: 57  ----------WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGT 106
                     WRD     LT       P   +   +D A A  +  +  +    + DLG 
Sbjct: 122 MAPDAELFEDWRD--GPALTEGGFWTAPGVFSADAIDPASALLVDALPDKLGHEVADLGA 179

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-F 165
           G G +   +L  +       V+    ALE A+ N        R     +D  +   G   
Sbjct: 180 GWGFLSAHILTRADVEAVHLVEAEHMALECARRNVT----DPRAVFHWADATAWTPGRKV 235

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           D +V NPP+  S   D             +L     G +  R      +  L   G   +
Sbjct: 236 DAVVMNPPFHTSRTADP------------AL-----GQAFVRA----AAAMLKPQGQLWM 274


>gi|194438371|ref|ZP_03070461.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           101-1]
 gi|253774111|ref|YP_003036942.1| 23S rRNA methyluridine methyltransferase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160974|ref|YP_003044082.1| 23S rRNA methyluridine methyltransferase [Escherichia coli B str.
           REL606]
 gi|300929332|ref|ZP_07144805.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           187-1]
 gi|194422595|gb|EDX38592.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           101-1]
 gi|242376675|emb|CAQ31387.1| 23S rRNA m[5]U747 methyltransferase [Escherichia coli BL21(DE3)]
 gi|253325155|gb|ACT29757.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972875|gb|ACT38546.1| 23S rRNA m(5)U747-methyltransferase [Escherichia coli B str.
           REL606]
 gi|253977089|gb|ACT42759.1| 23S rRNA m(5)U747-methyltransferase [Escherichia coli BL21(DE3)]
 gi|300462678|gb|EFK26171.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           187-1]
 gi|323962972|gb|EGB58544.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli H489]
          Length = 375

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F        +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWVRPQSFF--QTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++
Sbjct: 248 GLHCA--TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|119773953|ref|YP_926693.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           amazonensis SB2B]
 gi|119766453|gb|ABL99023.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           amazonensis SB2B]
          Length = 409

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    R++    + +L++GTG GA+ +         K     IS    + AK+     G
Sbjct: 177 LATICERLKLAPGMELLEIGTGWGALAIYAATHY-GVKVTTTTISDAQHDYAKARIREAG 235

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL-- 203
           +  +   L+ D +  +EG +D +VS    IE+V  + L       +  +      DGL  
Sbjct: 236 LEGQITLLKKD-YRLLEGKYDRLVS-IEMIEAVGHEYLPGFFSKLESLL----KDDGLML 289

Query: 204 -----------SHYRTIADGVSRHLNKDGLC 223
                        YR   D + +++   G  
Sbjct: 290 LQAITIADQRYESYRKGCDFIQKYIFPGGCL 320


>gi|291408091|ref|XP_002720420.1| PREDICTED: TRM2 tRNA methyltransferase 2 homolog B isoform 1
           [Oryctolagus cuniculus]
          Length = 503

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 19/143 (13%)

Query: 45  SLKHE--SIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G    +     +++ +S D F    +        L  ++  +   + 
Sbjct: 287 RCSHQQSPYQLLFGEPYIFEGLLGLKIRISPDAFF---QVNTAGAEMLYQTVGELSGVNA 343

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             IL D+  GTGA+ L+L + +   + +G+++  +A+E A+  A  NG++       R +
Sbjct: 344 NTILLDICCGTGAIGLSLAQHA--SQVLGIELVEQAVEDARWTAAFNGITNCEFHAGRAE 401

Query: 152 TLQSDWFSSVEGLFDVI-VSNPP 173
            +      S EG+  V+ V NPP
Sbjct: 402 KILPWLLKSKEGVQPVVAVVNPP 424


>gi|307728498|ref|YP_003905722.1| Site-specific DNA-methyltransferase (adenine-specific)
           [Burkholderia sp. CCGE1003]
 gi|307583033|gb|ADN56431.1| Site-specific DNA-methyltransferase (adenine-specific)
           [Burkholderia sp. CCGE1003]
          Length = 529

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +VDS + ++    E     RI+D G G+G   LA  K  P  + VG++    A  + ++N
Sbjct: 83  IVDSMVTWA--SNEATSPARIVDAGAGSGRFLLAAAKSFPEAELVGIESDPLAALMLRAN 140

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDV---IVSNPPYI 175
               G+  R + +  ++ ++     D     + NPPY+
Sbjct: 141 FACVGLMHRLNLIVGEYRTARLERIDGATLFIGNPPYV 178


>gi|207856315|ref|YP_002242966.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|226725412|sp|B5QYK4|RUMB_SALEP RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|206708118|emb|CAR32411.1| hypothetical RNA methyltransferase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 375

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|315923962|ref|ZP_07920190.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622802|gb|EFV02755.1| methyltransferase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 259

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 31/133 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R + ++L+ G GTG + L L K+   F+   VD+S + L +A   A T G+  RF     
Sbjct: 47  RPIKKVLEFGCGTGNITLELAKK--GFEVTAVDLSEEMLTVADEKADTAGLPVRFFKGDM 104

Query: 156 DWFSSVEGLFDVIVSN---PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             F  ++  FD +        Y+ +                         +         
Sbjct: 105 SNFR-IDEQFDAVFCCCDSVNYLPT-------------------------MQDVENFIIC 138

Query: 213 VSRHLNKDGLCSV 225
            S  L   G+   
Sbjct: 139 ASEVLAPGGMLIF 151


>gi|240015800|ref|ZP_04722340.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA6140]
 gi|240114890|ref|ZP_04728952.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|260441294|ref|ZP_05795110.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI2]
 gi|268600547|ref|ZP_06134714.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
 gi|268584678|gb|EEZ49354.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID18]
          Length = 295

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDS 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|237721202|ref|ZP_04551683.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229448998|gb|EEO54789.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 255

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 27/141 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L F    + K    RIL+L  GTG + L + K+     GV    S   L  AK  A   G
Sbjct: 27  LQFYKRWLPKNKDARILELCCGTGRLTLPIAKDGYDISGVDYTAS--MLHQAKMKAAEAG 84

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  R + +Q+D  +  ++  +D+I     +I    +  L      ++             
Sbjct: 85  L--RINFIQADIRTLDLQEKYDLI-----FIPFNSIHHL------YEN-----------E 120

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
               +   V  HL   GL  +
Sbjct: 121 DLFKVLHVVKNHLKDGGLFLL 141


>gi|218282061|ref|ZP_03488366.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989]
 gi|218216979|gb|EEC90517.1| hypothetical protein EUBIFOR_00937 [Eubacterium biforme DSM 3989]
          Length = 189

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 44/183 (24%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC---LALLKESPFFKGVGVDISCKALEI 136
           +++D  L+F L ++++   +  L+LGT   A+    + + K  P  + V ++ + + +  
Sbjct: 15  IMMDDGLSFLLEKLQENQCLSFLELGT---AIARTSIEVAKLDPRMRVVTIERNSEMIVQ 71

Query: 137 AKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           AK N   +G+S++   ++ D    +V+G+FD I     +I++                  
Sbjct: 72  AKKNIEESGLSDQITLIEGDALEVNVDGMFDCI-----FIDAAKAQ-------------- 112

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCS-----VEIGYNQKVDVVRIFESRKLFLVNAF 250
                     Y+   +    HLN++G+          G  Q  ++ +   +R+L  V   
Sbjct: 113 ----------YQRFFEKYCMHLNENGIIVSDNMNF-HGLVQHPELTQNRNTRQL--VRKI 159

Query: 251 KDY 253
            DY
Sbjct: 160 HDY 162


>gi|329121319|ref|ZP_08249945.1| methyltransferase [Dialister micraerophilus DSM 19965]
 gi|327469728|gb|EGF15194.1| methyltransferase [Dialister micraerophilus DSM 19965]
          Length = 404

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 26/135 (19%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TGA  L   K         +DIS  A+++A  +A  N + E    L++D
Sbjct: 229 KGKNVLDCFTHTGAFALNAAKSGAKS-VTAIDISQHAVDMATHHAEINEL-ENMKVLKAD 286

Query: 157 WFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            F        + E  +D I+ +PP                     +  G       Y+ I
Sbjct: 287 VFDYLTQQDKNHEHKYDYIILDPPAFTKSGSTV----------HSAFRG-------YKEI 329

Query: 210 ADGVSRHLNKDGLCS 224
                + L + G  +
Sbjct: 330 NYRAMKLLPRGGYLA 344


>gi|92118256|ref|YP_577985.1| ribosomal L11 methyltransferase [Nitrobacter hamburgensis X14]
 gi|91801150|gb|ABE63525.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Nitrobacter hamburgensis X14]
          Length = 298

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L   +PR       R+LDLG GTG + +A  K       +  DI  ++  +A+ 
Sbjct: 146 LLLDHVLRSKMPR-------RVLDLGAGTGVLAIAAAKALRR-NVLASDIDPRSTIVARE 197

Query: 140 NAVTNGVSERFDTLQSDWFSSV----EGLFDVIVSN 171
           NAV NGV     ++ +  FS+        FD++++N
Sbjct: 198 NAVLNGVGNLVWSICATGFSAPLFRARAPFDLVLAN 233


>gi|323976756|gb|EGB71844.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TW10509]
          Length = 375

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 9/125 (7%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
            + L  R F +V L +   +F    +T  +V S L A +   + +  V  + DL  G G 
Sbjct: 191 QQALAER-FNDVPLWIRPQSFF---QTNPVVASQLYATARDWVRQLPVKHMWDLFCGVGG 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVI 168
             L     +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   +++
Sbjct: 247 FGLHCA--TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELV 304

Query: 169 VSNPP 173
           + NPP
Sbjct: 305 LVNPP 309


>gi|313888247|ref|ZP_07821918.1| methyltransferase small domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845650|gb|EFR33040.1| methyltransferase small domain protein [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 131

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R LDLG G G + L +       +   VDI+   LE  + + + N + ++   ++ 
Sbjct: 34  KKGRRALDLGCGNGILSLRIADRYE--EIHSVDINKIVLENFRESLIVNRLEDKIKIIEK 91

Query: 156 DWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           D F+  E      FD IV NPPY +   +    +  + F
Sbjct: 92  DVFALKEVYETNYFDSIVFNPPYYDYENIKFETIPAKHF 130


>gi|308063823|gb|ADO05710.1| cyclopropane fatty acid synthase [Helicobacter pylori Sat464]
          Length = 389

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +    A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYRQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|300868788|ref|ZP_07113397.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333224|emb|CBN58589.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 230

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 7/89 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P P    +VD  L   L  ++  DV  + DLG+G G + +A  ++    +G+G+DI+
Sbjct: 77  VYVPTP--VKVVDEMLR--LANVQSNDV--VYDLGSGDGRIVIAAAQKV-GARGIGIDIN 129

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            + +  A  NA   GVS+R +  Q+D F 
Sbjct: 130 PERIREANENAQKAGVSDRVEFRQADLFQ 158


>gi|190892563|ref|YP_001979105.1| ribosomal protein L11 methyltransferase [Rhizobium etli CIAT 652]
 gi|226710103|sp|B3PTU0|PRMA_RHIE6 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|190697842|gb|ACE91927.1| ribosomal protein L11 methyltransferase protein [Rhizobium etli
           CIAT 652]
          Length = 292

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 35/170 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R V   LDLGTG+G + +A+ ++      +  DI   A  +A  N   NG
Sbjct: 140 LEVIDRVVRSRRVRNALDLGTGSGVLAIAV-RKLKNIPVLATDIDPIATRVAAENVRRNG 198

Query: 146 VSERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           ++    T  +  F S      G FD+I++N   +   ++                     
Sbjct: 199 IASGIVTRTAPGFHSTAFSEHGPFDLIIAN--ILARPLI--------------------- 235

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAF 250
                  +A  ++ HL   G   +  I   Q+  V+  +   +L  V   
Sbjct: 236 ------RMAPQLAAHLAPAGSVILSGILAAQRWKVIAAYSGARLRHVRTI 279


>gi|126732351|ref|ZP_01748151.1| ribosomal protein L11 methyltransferase, putative [Sagittula
           stellata E-37]
 gi|126707220|gb|EBA06286.1| ribosomal protein L11 methyltransferase, putative [Sagittula
           stellata E-37]
          Length = 289

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 48/195 (24%)

Query: 73  EPRPETELLVDSALAF-------------SLPRIEKRDVV--RILDLGTGTGAVCLALLK 117
            P     LL+++A+AF             +L R+     V   + D+G GT  + +   +
Sbjct: 110 IPEGSEPLLIEAAMAFGTGHHGTTQGCLEALDRLAGEGFVGRNVADVGCGTAVLAMGAAR 169

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
             P    V  DI   A+E+A++N   N + +R   +++  F +     DV+    PY   
Sbjct: 170 IWPE-TVVASDIDEVAVEVAEANVRANALEDRVICVEAAGFEN-----DVLHERAPY--- 220

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS---RHLNKDGLCSV-EIGYNQKV 233
              D +   +                   + + D       HL   G   +  I   Q  
Sbjct: 221 ---DLVFANILK-----------------QPLIDLAPSMNAHLADGGYAILSGILTRQAD 260

Query: 234 DVVRIFESRKLFLVN 248
           +V   + ++ +  VN
Sbjct: 261 EVAEAYAAQGISEVN 275


>gi|292489553|ref|YP_003532443.1| putative ribosomal RNA small subunit methyltransferase D [Erwinia
           amylovora CFBP1430]
 gi|292898229|ref|YP_003537598.1| ribosomal RNA small subunit methyltransferase D [Erwinia amylovora
           ATCC 49946]
 gi|291198077|emb|CBJ45180.1| putative ribosomal RNA small subunit methyltransferase D [Erwinia
           amylovora ATCC 49946]
 gi|291554990|emb|CBA23008.1| putative ribosomal RNA small subunit methyltransferase D [Erwinia
           amylovora CFBP1430]
 gi|312173728|emb|CBX81982.1| putative ribosomal RNA small subunit methyltransferase D [Erwinia
           amylovora ATCC BAA-2158]
          Length = 375

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 24/144 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F +  + +     I+DLG G G + L  L+++P  +   +D S  A+  ++ N  
Sbjct: 214 DIGARFFMQHLPENIDGEIIDLGCGNGVIGLIALQQNPLAQIHFLDESYMAVASSRLNVG 273

Query: 143 TNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N   +  R +   ++  +         ++ NPP+ +          V D          
Sbjct: 274 LNCPDDLARCEFRVNNALAGYPSDRLHAVLCNPPFHQ-------QNAVTDH--------- 317

Query: 200 IDGLSHYRTIADGVSRHLNKDGLC 223
                    +     R L   G  
Sbjct: 318 -----IAWQMFRDARRCLQYGGEL 336


>gi|32474248|ref|NP_867242.1| SAM-dependent methyltransferase [Rhodopirellula baltica SH 1]
 gi|32444786|emb|CAD74788.1| conserved hypothetical protein-putative SAM-dependent
           methyltransferases [Rhodopirellula baltica SH 1]
          Length = 453

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 43/131 (32%), Gaps = 25/131 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+ T T          +   + V VD S +AL+IAK NA  N ++      Q D F 
Sbjct: 282 RVLDICTYT-GGFALAAARAGAKEVVAVDSSERALDIAKRNAERNQLT-NVRFDQGDCFD 339

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++        FD I+ +PP                             L  Y  +    
Sbjct: 340 DLKERRERGEQFDAIILDPPRFAGSRNQTNAA-----------------LRAYTRLNASA 382

Query: 214 SRHLNKDGLCS 224
              L   G+  
Sbjct: 383 VDLLPPGGILV 393


>gi|83859907|ref|ZP_00953427.1| ribosomal protein L11 methyltransferase, putative [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852266|gb|EAP90120.1| ribosomal protein L11 methyltransferase, putative [Oceanicaulis
           alexandrii HTCC2633]
          Length = 291

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LDLGTGTG + +A  K     + +  DI  +++     N   NGV  R + + +D
Sbjct: 149 HPKTVLDLGTGTGLLAIAAAKIWSDCEILATDIDEESVIETVENTAKNGVKPRIEAVTAD 208

Query: 157 WFSSV---EGLFDVIVSNPPYIESVIVDCLGLEV 187
            F         F++I +N   I +  +  L  E+
Sbjct: 209 GFHHPVFEGAKFELIFAN---ILAGPLITLAPEI 239


>gi|46907726|ref|YP_014115.1| O-methyltransferase family protein [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47093420|ref|ZP_00231185.1| O-methyltransferase family protein [Listeria monocytogenes str. 4b
           H7858]
 gi|226224099|ref|YP_002758206.1| O-methyltransferase [Listeria monocytogenes Clip81459]
 gi|254824443|ref|ZP_05229444.1| O-methyltransferase [Listeria monocytogenes FSL J1-194]
 gi|254931433|ref|ZP_05264792.1| O-methyltransferase [Listeria monocytogenes HPB2262]
 gi|254993600|ref|ZP_05275790.1| O-methyltransferase [Listeria monocytogenes FSL J2-064]
 gi|255521195|ref|ZP_05388432.1| O-methyltransferase [Listeria monocytogenes FSL J1-175]
 gi|46880995|gb|AAT04292.1| O-methyltransferase family protein [Listeria monocytogenes serotype
           4b str. F2365]
 gi|47018199|gb|EAL08967.1| O-methyltransferase family protein [Listeria monocytogenes str. 4b
           H7858]
 gi|225876561|emb|CAS05270.1| Putative O-methyltransferase [Listeria monocytogenes serotype 4b
           str. CLIP 80459]
 gi|293582984|gb|EFF95016.1| O-methyltransferase [Listeria monocytogenes HPB2262]
 gi|293593679|gb|EFG01440.1| O-methyltransferase [Listeria monocytogenes FSL J1-194]
 gi|328474862|gb|EGF45662.1| O-methyltransferase [Listeria monocytogenes 220]
 gi|332311940|gb|EGJ25035.1| O-methyltransferase family protein [Listeria monocytogenes str.
           Scott A]
          Length = 217

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            ++R   L +D     E     G FD I
Sbjct: 100 ANDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|300703018|ref|YP_003744620.1| ribosomal protein l11 methyltransferase [Ralstonia solanacearum
           CFBP2957]
 gi|299070681|emb|CBJ41976.1| Ribosomal protein L11 methyltransferase [Ralstonia solanacearum
           CFBP2957]
          Length = 298

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VG+DI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERALDYGCGSGILAI-VAKKLGAGETVGIDIDPNAVEASRYNAERNR 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VEAGFSLPD----DAPEGTFDLVVAN 234


>gi|228946145|ref|ZP_04108480.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228813558|gb|EEM59844.1| Methyltransferase type 11 [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 210

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 29/173 (16%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
            F  +   LS  T++     E          + ++      +ILD+GTG+G++ + L   
Sbjct: 2   PFIYITFILSYSTYQFAAFGEDYQSKIHDLIVKKVNWDGKGKILDIGTGSGSLIIKLAMA 61

Query: 119 SPFFKGVGVD---ISCK-ALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNP 172
            P     G+D    + + + +  + NA   GVS R D L++        +  FD++VS  
Sbjct: 62  FPKSFLTGIDYWGKNWEYSRDQCQQNAEIEGVSGRIDFLKASAAELPLQDDEFDIVVSCL 121

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
            +           EV+D   +I              + D   R L   G    
Sbjct: 122 TF----------HEVKDTKNKI-------------EVIDEALRVLKPGGEFVF 151


>gi|224826229|ref|ZP_03699331.1| ribosomal protein L11 methyltransferase [Lutiella nitroferrum 2002]
 gi|224601330|gb|EEG07511.1| ribosomal protein L11 methyltransferase [Lutiella nitroferrum 2002]
          Length = 298

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A   +      VG+DI  +A+  ++ NA  N V  RF    +
Sbjct: 162 KGGESVLDYGCGSGILAIA-ALKLGAASAVGIDIDPQAVRASQDNAAQNQVVARFYLPDA 220

Query: 156 DWFSSVEGLFDVIVSNP 172
              +  + +   I++NP
Sbjct: 221 TPPAQYDVVLANILANP 237


>gi|221124252|ref|XP_002159425.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 286

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                        R+LD G G+G + +   K     + + VDI   A++    NA  N V
Sbjct: 146 MCLRWIARNGGSGRVLDYGCGSGILAIGAAK-FGATEVIAVDIDQAAVDSTVLNAEANHV 204

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSN 171
                TL S    + +G+FDV+++N
Sbjct: 205 -----TLVSGLPEAAQGVFDVVLAN 224


>gi|149411218|ref|XP_001514237.1| PREDICTED: similar to hepatocellular carcinoma-associated antigen
           137 [Ornithorhynchus anatinus]
          Length = 845

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 67/158 (42%), Gaps = 18/158 (11%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFS 159
           ++D   G G   +         + + +DI    +++A++NA   GV++R + +  D    
Sbjct: 674 VVDAFCGVGGNAIQFALAGK--RVIAIDIDPVKIDLARNNAQVYGVADRLELICGDFLLL 731

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY---RTIADGVSRH 216
           +     DV+  +PP+      D    E+ D    +S     DG   +   R I + +   
Sbjct: 732 APNLKADVVFLSPPW---GGPDYATAEIFDIRTMMS----PDGFEIFSLSRKITNNIVYF 784

Query: 217 LNKDG----LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           L ++     + S+  G   +V++ + F + KL  + A+
Sbjct: 785 LPRNADVDQVASL-AGPGGQVEIEQNFLNNKLKTITAY 821


>gi|126314177|ref|XP_001365198.1| PREDICTED: similar to methyltransferase 10 domain containing,
           [Monodelphis domestica]
          Length = 557

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 22/180 (12%)

Query: 61  YNVRLTLSSDTFEPRPETEL-LVDSALAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKE 118
           + + + +  +   P     L  +        P    R  +R  +D+GTG   +   L   
Sbjct: 64  FGLSIDIPLERLIPTVPLRLNYIHWVEDLIGPWDPARSALRRGIDIGTGASCIYPLLGAT 123

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLFDVIVS 170
              +  +  ++       AK N   N +S+            L        E ++D  + 
Sbjct: 124 LNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMC 183

Query: 171 NPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GVSRHLN 218
           NPP+  +            R   P     GG      +G  L   + I      + + L 
Sbjct: 184 NPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLR 243


>gi|21243169|ref|NP_642751.1| XamI DNA methyltransferase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108692|gb|AAM37287.1| XamI DNA methyltransferase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 528

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 10/115 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P P    +V S + +      +    RI+D G G+G   LA     P  + V V++ 
Sbjct: 77  VYTPAP----IVRSMMTWL---ASQGTPARIVDPGAGSGRFILAAGLAFPDAQLVAVEMD 129

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             A  + ++N    G ++R   L  D+              + NPPY+    +  
Sbjct: 130 PLAALMLRANLSARGWTDRATVLVKDYREVKLPRCAGMTAFIGNPPYVRHHDIAE 184


>gi|323498781|ref|ZP_08103767.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM
           21326]
 gi|323316143|gb|EGA69168.1| ribosomal protein L11 methyltransferase [Vibrio sinaloensis DSM
           21326]
          Length = 295

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 18/126 (14%)

Query: 61  YNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRDVV--RILDLGT 106
           +  RL +       P P+   +++D  LAF           L  +E  D+    ++D G 
Sbjct: 109 FGERLWICPSWRDIPEPDAVNVMLDPGLAFGTGTHPTTALCLEWLEGLDLTGKTVIDFGC 168

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSDWFSSVEGLF 165
           G+G + +A +K     K +G+DI  +AL  +K NA  NGV+E+ +  L  D  + +  + 
Sbjct: 169 GSGILAIAAIKLGAE-KVIGIDIDPQALLASKDNAERNGVAEQLEVFLPQDQPAGL--IA 225

Query: 166 DVIVSN 171
           DV+V+N
Sbjct: 226 DVVVAN 231


>gi|303247595|ref|ZP_07333866.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ]
 gi|302491075|gb|EFL50969.1| ribosomal L11 methyltransferase [Desulfovibrio fructosovorans JJ]
          Length = 286

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 3/96 (3%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L   A A            R LDLGTG+G + + L K      GVG+DI  +A+  
Sbjct: 131 PTTALCLEAFAACAATGRLVAGKRFLDLGTGSGILGIGLAKL--GLTGVGLDIDPQAVWC 188

Query: 137 AKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171
           A  N   N V E          + S E +FD++ +N
Sbjct: 189 AAENLRLNAVDEAMSLAVGGVGAVSPEAVFDIVAAN 224


>gi|120601968|ref|YP_966368.1| ribosomal L11 methyltransferase [Desulfovibrio vulgaris DP4]
 gi|120562197|gb|ABM27941.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfovibrio vulgaris DP4]
          Length = 283

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 28/170 (16%)

Query: 28  SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFY-----NVRLTLSSDTF---------- 72
             L    R FL +A++     E+   +  WR+F+          +               
Sbjct: 54  EALVADVRAFLPDALLDREDVEAADWLASWREFFTPVPVGTHFLVIPPWLRDSAPLEGRM 113

Query: 73  ----EPR-------PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
               EP+         T  L    ++        R  +  LDLGTG+G + +        
Sbjct: 114 PIVIEPKTAFGTGHHPTTALCLGVVSQLAAEGRIRAGMSFLDLGTGSGILGIGCALL--G 171

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
             G G DI   A+E A  N   NGV+E FD +           FDV+++N
Sbjct: 172 LSGTGTDIDPLAVENADENRHINGVAEAFDVMAGSTEVVRGRTFDVVLAN 221


>gi|328870337|gb|EGG18712.1| hypothetical protein DFA_04208 [Dictyostelium fasciculatum]
          Length = 596

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 16/123 (13%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+GTG   +   L         +  DIS K+LE AK N   NG  +       D  + +
Sbjct: 162 IDIGTGASCIYPLLGVRLLNMSFLATDISTKSLEYAKRNIELNGFEDSIQLKLVDNPNQI 221

Query: 162 E--------------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                            +D  + NPP+ +              +  ++  GG   L   +
Sbjct: 222 LVGVIDQPSQQQQQVKSYDFCMCNPPFFDESKYLNPKSSCIASESELTTLGGE--LEFIK 279

Query: 208 TIA 210
            + 
Sbjct: 280 KMI 282


>gi|310778169|ref|YP_003966502.1| SAM-dependent methyltransferase [Ilyobacter polytropus DSM 2926]
 gi|309747492|gb|ADO82154.1| SAM-dependent methyltransferase [Ilyobacter polytropus DSM 2926]
          Length = 393

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 24/135 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R LD+ + +G   +A LKE    K V +D +  AL++   N   N     F+T++ D
Sbjct: 216 QNTRFLDVFSSSGGFSVAALKEGCK-KVVAIDKNAHALKLCHENYELNNFDGNFETVEGD 274

Query: 157 WFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  ++        +DVI  +PP +    +D     VR             G   +  + 
Sbjct: 275 AFMLLKIMAERGDKYDVITLDPPSLIKKKID-----VRR------------GRDFFYDLC 317

Query: 211 DGVSRHLNKDGLCSV 225
           D   + L  DG+  +
Sbjct: 318 DQSFKMLENDGILGI 332


>gi|15673708|ref|NP_267882.1| hypothetical protein L165684 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281492317|ref|YP_003354297.1| O-methyltransferase [Lactococcus lactis subsp. lactis KF147]
 gi|12724745|gb|AAK05824.1|AE006403_2 conserved hypothetical protein [Lactococcus lactis subsp. lactis
           Il1403]
 gi|281375981|gb|ADA65472.1| O-methyltransferase [Lactococcus lactis subsp. lactis KF147]
 gi|326407192|gb|ADZ64263.1| O-methyltransferase [Lactococcus lactis subsp. lactis CV56]
          Length = 227

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
              RIL++GT  G   L + +E P  + V +D + + +E+AK N        +    +  
Sbjct: 68  QPKRILEIGTAIGFSALIMAQEVPNAEIVTIDRNPEMIELAKKNLGKYDHRNQIILKEGD 127

Query: 156 --DWFSSVEGLFDVIVS 170
             D    + G FDVI  
Sbjct: 128 AADILKELSGSFDVIFM 144


>gi|327539611|gb|EGF26219.1| SAM-dependent methyltransferase [Rhodopirellula baltica WH47]
          Length = 453

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 43/131 (32%), Gaps = 25/131 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD+ T T          +   + V VD S +AL+IAK NA  N ++      Q D F 
Sbjct: 282 RVLDICTYT-GGFALAAARAGAKEVVAVDSSERALDIAKRNAERNQLT-NVRFDQGDCFD 339

Query: 160 SVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            ++        FD I+ +PP                             L  Y  +    
Sbjct: 340 DLKERRERGEQFDAIILDPPRFAGSRNQTNAA-----------------LRAYTRLNASA 382

Query: 214 SRHLNKDGLCS 224
              L   G+  
Sbjct: 383 VDLLPPGGILV 393


>gi|326436196|gb|EGD81766.1| hypothetical protein PTSG_02479 [Salpingoeca sp. ATCC 50818]
          Length = 735

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 44  RSLKHESIHRILG------WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
              K      I+             +   +S D+F         V  +L     ++    
Sbjct: 451 CMAKDRPAPHIIKGDSQFIEEKLLGLNFRISPDSFFQVNTPGAEVLYSLIGDWCQLTDDK 510

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
              +LDL  GTG +   L         +GV++   A+  AK+NA  NG++ 
Sbjct: 511 SDVVLDLCCGTGTIGQTLASRVQ--HVIGVEMVEDAVIDAKANAQRNGITN 559


>gi|294791683|ref|ZP_06756831.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella sp.
           6_1_27]
 gi|294456913|gb|EFG25275.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella sp.
           6_1_27]
          Length = 496

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D ALA++    + +    ++D   GTG + L L  ++
Sbjct: 312 DLRFTLSPHSFFQVNPEQTTVLYDQALAYA----DLKGTEIVIDAYCGTGTISLFLAHKA 367

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 368 K--HVIGIEIVEPAIINARENARRNGY-DNTEFIVADAAVEMPKLYKAGVRPDVIVFDP- 423

Query: 174 YIESVIVDCLGLEVRDFDPR 193
            I +   + +       +P+
Sbjct: 424 -IRAGCKEEVLTSAASMEPK 442


>gi|291301387|ref|YP_003512665.1| methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
 gi|290570607|gb|ADD43572.1| Methyltransferase type 11 [Stackebrandtia nassauensis DSM 44728]
          Length = 243

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G G   L L      ++  GVDIS  ALE A+  A   GV   F    +   + 
Sbjct: 59  VLDVGCGLGENALFLAGR--GYRVTGVDISPTALEQARQRAADKGVEVDFVVGDATRLAG 116

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           ++  FD +      I+S +  CL  E+R+
Sbjct: 117 LDARFDTV------IDSALFHCLKPELRN 139


>gi|311741682|ref|ZP_07715504.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311303203|gb|EFQ79284.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 227

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPF--FKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
                R+LDLG GTG +   L  ES +     VG D+S  A+ IA+  A  +G+  + + 
Sbjct: 51  PDAPARVLDLGCGTGWLARTLAAESRYRRANIVGYDLSPNAIRIARERAAADGLGAQTEF 110

Query: 153 LQSDWFSSVEG 163
             +D  + + G
Sbjct: 111 HVADILTPLAG 121


>gi|254388789|ref|ZP_05004021.1| trans-aconitate 2-methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|197702508|gb|EDY48320.1| trans-aconitate 2-methyltransferase [Streptomyces clavuligerus ATCC
           27064]
          Length = 301

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 34/143 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
           R  +RI D+G G G V   L +  P     G D S + +E A+     +G       R D
Sbjct: 68  RAPLRIADIGCGAGNVTALLAERWPDALITGFDNSPEMVEHAR---TAHGGPTAGGGRLD 124

Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             + D    + EG +D+IVSN       ++  +                       R + 
Sbjct: 125 FTEGDAHDWLPEGGYDLIVSN------AVLHWVPGH--------------------RALL 158

Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233
              +  LN  G+ + ++  N   
Sbjct: 159 GRWAEALNPGGVLAFQVPANFAA 181


>gi|114328067|ref|YP_745224.1| cyclopropane-fatty-acyl-phospholipid synthase [Granulibacter
           bethesdensis CGDNIH1]
 gi|114316241|gb|ABI62301.1| cyclopropane-fatty-acyl-phospholipid synthase [Granulibacter
           bethesdensis CGDNIH1]
          Length = 419

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  + +L++G+G G + L L + +   +  G+ +S + L +++  A   G+S+R      
Sbjct: 187 RPDLDVLEIGSGWGGMALHLAR-NHGARVTGLTLSTEQLNLSRQRAAEAGLSDRVRFELM 245

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D + +     D IVS                V  F+          G+ HY+T  + V  
Sbjct: 246 D-YRAWRQPADRIVS----------------VGMFE--------HVGIGHYQTFFETVRD 280

Query: 216 HLNKDGLCSV 225
            L  DG+  +
Sbjct: 281 RLRPDGIALI 290


>gi|76154235|gb|AAX25727.2| SJCHGC06451 protein [Schistosoma japonicum]
          Length = 181

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 8/92 (8%)

Query: 83  DSALAFSLPRIEKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           +SA   +       +  RIL D+  GTG + L L K     + +G+DI   A+E AK NA
Sbjct: 4   ESANQIACSGEIHNERKRILLDVCCGTGTIGLCLAKHFH--RVIGIDICNSAIEDAKLNA 61

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
             N +    + +        E +   ++ N P
Sbjct: 62  QLNDIQ-NVEFIAGKA----EDMLRNVIQNLP 88


>gi|268573200|ref|XP_002641577.1| Hypothetical protein CBG09879 [Caenorhabditis briggsae]
 gi|74791081|sp|Q61J97|MET16_CAEBR RecName: Full=Methyltransferase-like protein 16 homolog; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|187031362|emb|CAP29423.1| CBR-METT-10 protein [Caenorhabditis briggsae AF16]
          Length = 481

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 23/152 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            +DF ++ + L +    PR   +L    L+D  L  +         V  +D+GTGT  + 
Sbjct: 61  KKDF-SLNVNLPAGHLVPRVPQKLNYCLLIDDILQAN----SITSNVVGIDIGTGTSCIH 115

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---------SDWFSSVEG 163
             +      +K V  D    ++++A  N   N + +    +           D  +S+  
Sbjct: 116 ALIGARHFGWKFVATDGDENSVQVAHENVARNEMGDSICVVHVNPAVKTVLMDVINSMPD 175

Query: 164 L-FDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
             F   + NPP+ E    +    E    +P +
Sbjct: 176 SEFSFCMCNPPFFEKSDKEERFCE----EPSL 203


>gi|16803538|ref|NP_465023.1| hypothetical protein lmo1498 [Listeria monocytogenes EGD-e]
 gi|224501562|ref|ZP_03669869.1| hypothetical protein LmonFR_03427 [Listeria monocytogenes FSL
           R2-561]
 gi|16410927|emb|CAC99576.1| lmo1498 [Listeria monocytogenes EGD-e]
          Length = 217

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 100 ASDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|315453997|ref|YP_004074267.1| type I restriction-modification system [Helicobacter felis ATCC
           49179]
 gi|315133049|emb|CBY83677.1| type I restriction-modification system [Helicobacter felis ATCC
           49179]
          Length = 557

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG----VGV 127
           F P+  +ELL    L        ++D+ ++ D   G+G++ L   K            G 
Sbjct: 240 FTPQEVSELLAKLVLHG------QKDINKVYDPCCGSGSLLLKFAKILGKENIKQGFFGQ 293

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDC 182
           +I+     + ++N   + +   +FD    D   + +      FD IVSNPPY    + D 
Sbjct: 294 EINLTTYNLCRANMFLHNIEYNQFDIAHGDTLLNPQLEDFEPFDAIVSNPPYSTKWVGDD 353

Query: 183 LGLEVRDFDPRISLDG 198
               +   DPR +  G
Sbjct: 354 DP--LLINDPRFAPAG 367


>gi|295107738|emb|CBL21691.1| Predicted deacylase [Ruminococcus obeum A2-162]
          Length = 817

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 38  LTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD 97
               + R  + +   RI+ + +  +    +       +     + +  +     ++ +  
Sbjct: 570 YGRIVSRYDERK--ERIVNYWEKRSDSFLVQKR----QELHSAMAERWMREIHAQLPEEK 623

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            ++ILD+G G G   + L KE   ++  G+D++   ++ A+  A    VS  F  + ++ 
Sbjct: 624 NLKILDVGCGAGFFSILLAKE--GYQVTGIDLTPDMIKNARLLAEEEKVSCEFQVMDAEN 681

Query: 158 FSSVEGLFDVIVS 170
               +  FDV++S
Sbjct: 682 PEFPDETFDVVIS 694



 Score = 41.6 bits (97), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L    P  E +++ +ILD+GTG G   + L +    ++   VD + + L+ A+SNA    
Sbjct: 43  LGNQFPEKEPKEI-KILDVGTGPGFFAILLAEA--GYQVTAVDYTEEMLKEAQSNAGGLA 99

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
               + T  +         FD +V+
Sbjct: 100 ECIVWKTGDAQALDVESNSFDAVVT 124


>gi|260587793|ref|ZP_05853706.1| RNA methyltransferase, RsmD family [Blautia hansenii DSM 20583]
 gi|331083795|ref|ZP_08332904.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260542058|gb|EEX22627.1| RNA methyltransferase, RsmD family [Blautia hansenii DSM 20583]
 gi|330403220|gb|EGG82780.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 183

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 12/136 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G     ++ L       E RP T+ + ++      P + +    R LD+  G+G + +
Sbjct: 4   IAGSAK--SMPLKTIPG-LETRPTTDRVKETLFNMLQPYLCE---CRFLDIFAGSGGIGI 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVI 168
             L     F    ++ + KA  + + N     +++R D    D F +V     E  FD I
Sbjct: 58  EALSRGAQFCVF-IEKNRKAAAVIEDNLKFTKLADRADVWCKDIFQAVAFLENEEPFDCI 116

Query: 169 VSNPPYIESVIVDCLG 184
             +PPY + +    L 
Sbjct: 117 FMDPPYNQELEKQVLE 132


>gi|238481989|ref|XP_002372233.1| SAM domain methyltransferase, putative [Aspergillus flavus
           NRRL3357]
 gi|220700283|gb|EED56621.1| SAM domain methyltransferase, putative [Aspergillus flavus
           NRRL3357]
          Length = 387

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 42/134 (31%), Gaps = 39/134 (29%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER--FDTL 153
            +  RILDLGTGTG   +A+  + P    +G D+S             + V     F+  
Sbjct: 149 ENPRRILDLGTGTGLWAIAMADQYPEAHVIGTDLSP---------IQPSWVPPNCVFEID 199

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +   +    FD I              +   V+DF P                +    
Sbjct: 200 DFELPWNFTQPFDFI----------HARSVEGSVKDF-PH---------------LFRQA 233

Query: 214 SRHLNKDGLCSVEI 227
            + L   G    E+
Sbjct: 234 HQSLVPGGW--FEM 245


>gi|193662159|ref|XP_001950779.1| PREDICTED: trimethylguanosine synthase-like [Acyrthosiphon pisum]
          Length = 248

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 9/128 (7%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           I+D   G G+  +     S   K + +DI    +E+A++NA   GVS+R + +  D+++ 
Sbjct: 90  IIDGFCGAGSNSIQFALTSK--KVIAIDIDPIKIELARNNAKVYGVSDRIEFIIGDYYAL 147

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           +     DV+   PP+            + D  P     GG       R I   ++  L K
Sbjct: 148 APTLKADVVFLAPPWGGPKYSQKTTFNIDDIMPNN--GGGKHLYELTRQITKNIAFFLPK 205

Query: 220 DGLCSVEI 227
           +    +E 
Sbjct: 206 N----IEH 209


>gi|90411273|ref|ZP_01219285.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
           profundum 3TCK]
 gi|90327802|gb|EAS44133.1| cyclopropane-fatty-acyl-phospholipid synthase [Photobacterium
           profundum 3TCK]
          Length = 409

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 29/156 (18%)

Query: 73  EPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
             R E + L+      +     +++ +    +L++GTG GA+     K     +     I
Sbjct: 164 IYRSEQDDLLTAQTHKMDRLCRQLDLKPTDHLLEIGTGWGALATHAAKHY-GCRVTTTTI 222

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           S +  + AK      G+ ++   L  D +  + G +D +VS        +V+ +G E   
Sbjct: 223 SKEQYDWAKECVEQQGLGDKITLLLDD-YRDLTGQYDKVVSV------EMVEAVGKEY-- 273

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        L+ Y          L   GL ++
Sbjct: 274 -------------LTTY---IKKCQSLLKPGGLLAL 293


>gi|86144847|ref|ZP_01063179.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. MED222]
 gi|85837746|gb|EAQ55858.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. MED222]
          Length = 426

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     R+E  +   ++++GTG G + + + +           IS     +A+      G
Sbjct: 185 MKTICERLELSEKDNVVEIGTGWGGLAIFMAQHY-GCHVTTTTISDAQHALAEQRVKALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++++   L+ D + ++ G +D +VS
Sbjct: 244 LTDKITLLKED-YRNLTGEYDKLVS 267


>gi|84386248|ref|ZP_00989277.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
           12B01]
 gi|84379018|gb|EAP95872.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio splendidus
           12B01]
          Length = 426

 Score = 56.3 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     R+E  +   ++++GTG G + + + +           IS     +A+      G
Sbjct: 185 MKTICERLELSEKDNVVEIGTGWGGLAIFMAQHY-GCHVTTTTISDAQHALAEQRVKALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           ++++   L+ D + ++ G +D +VS
Sbjct: 244 LTDKITLLKED-YRNLTGEYDKLVS 267


>gi|310829295|ref|YP_003961652.1| O-methyltransferase family 3 [Eubacterium limosum KIST612]
 gi|308741029|gb|ADO38689.1| O-methyltransferase family 3 [Eubacterium limosum KIST612]
          Length = 216

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 44/136 (32%), Gaps = 33/136 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           IE   +  IL++GT  G              +   ++   + +  A+ N    G  +R  
Sbjct: 51  IETHQIKSILEIGTAVGYSAGVFAHAMGKNGRVTTIERDERMIAQARENIAKMGYEDRIH 110

Query: 152 TLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            +Q D     +S+ G FD+I                           LDGG     HY  
Sbjct: 111 LIQGDAQETAASLTGTFDMIF--------------------------LDGGK---GHYIH 141

Query: 209 IADGVSRHLNKDGLCS 224
           + +   R L   GL  
Sbjct: 142 LLEDCMRLLKPGGLIV 157


>gi|300690399|ref|YP_003751394.1| ribosomal protein L11 methyltransferase [Ralstonia solanacearum
           PSI07]
 gi|299077459|emb|CBJ50084.1| Ribosomal protein L11 methyltransferase [Ralstonia solanacearum
           PSI07]
          Length = 298

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERTLDYGCGSGILAI-VAKKLGTGETVGVDIDPNAVEASRYNAERNR 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VEASFSLPD----DAPEGPFDLVVAN 234


>gi|296200999|ref|XP_002747852.1| PREDICTED: putative methyltransferase METT10D [Callithrix jacchus]
          Length = 570

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSSLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|291539998|emb|CBL13109.1| 23S rRNA m(5)U-1939 methyltransferase [Roseburia intestinalis
           XB6B4]
          Length = 492

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 10/123 (8%)

Query: 57  WRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           + +   ++  ++  +F        E+L  +A  F    ++      + DL +GTG +   
Sbjct: 282 YEELLGLKFKITPFSFFQTNSLGAEVLYQTAREFIGDALDDEANQTVFDLYSGTGTIAQI 341

Query: 115 LLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVS 170
           L   SP  K  +GV+I  +A+  A+ NA  NG++   + +  D      ++    D IV 
Sbjct: 342 L---SPVAKKVIGVEIVEEAVVAARENAALNGLT-NCEFIAGDVLKVIDTIGEKPDYIVL 397

Query: 171 NPP 173
           +PP
Sbjct: 398 DPP 400


>gi|326315609|ref|YP_004233281.1| 50S ribosomal protein L11 methyltransferase [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323372445|gb|ADX44714.1| ribosomal protein L11 methyltransferase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 293

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +   K         VDI   A+E  + NA  NGV+     L++    
Sbjct: 166 RVLDYGCGSGILAIGAAK-FGATDIDAVDIDPAAVESTRLNAEANGVA-----LKAGLPE 219

Query: 160 SVEGLFDVIVSN 171
           + +G +  +++N
Sbjct: 220 AAQGRYGTVLAN 231


>gi|268685806|ref|ZP_06152668.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626090|gb|EEZ58490.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 311

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 178 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 236

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 237 L----PQGQFDVVVAN 248


>gi|240013355|ref|ZP_04720268.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           DGI18]
 gi|240079937|ref|ZP_04724480.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|240112144|ref|ZP_04726634.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|240117094|ref|ZP_04731156.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|240120428|ref|ZP_04733390.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID24-1]
 gi|240122730|ref|ZP_04735686.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|240124921|ref|ZP_04737807.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268596077|ref|ZP_06130244.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268598202|ref|ZP_06132369.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268602780|ref|ZP_06136947.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268681329|ref|ZP_06148191.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268683500|ref|ZP_06150362.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268549865|gb|EEZ44884.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           FA19]
 gi|268582333|gb|EEZ47009.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           MS11]
 gi|268586911|gb|EEZ51587.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID1]
 gi|268621613|gb|EEZ54013.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           PID332]
 gi|268623784|gb|EEZ56184.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-92-679]
          Length = 295

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAEQNNVDAQFFLPDS 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|148258144|ref|YP_001242729.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Bradyrhizobium sp. BTAi1]
 gi|146410317|gb|ABQ38823.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Bradyrhizobium sp. BTAi1]
          Length = 343

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 28/146 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS-CKALEIAKSNA 141
           + AL  ++     +D  RIL+LG G G++ L + ++ P  +   V  S  + L IA   +
Sbjct: 102 EEALRQTVANAGLQDGQRILELGCGWGSLSLWMARQFPHAQITAVSNSHSQRLAIADMAS 161

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
               ++ R  T   + F+  +G FD +VS                V  F+  ++      
Sbjct: 162 ARGLLNLRVVTADMNDFAP-DGQFDRVVS----------------VEMFEHMMNW----- 199

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEI 227
                R +   V   L  +G   + I
Sbjct: 200 -----RQLLSRVRSWLKPEGRLFIHI 220


>gi|157160381|ref|YP_001457699.1| 23S rRNA methyluridine methyltransferase [Escherichia coli HS]
 gi|170020738|ref|YP_001725692.1| 23S rRNA methyluridine methyltransferase [Escherichia coli ATCC
           8739]
 gi|300921111|ref|ZP_07137495.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           115-1]
 gi|312970983|ref|ZP_07785162.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           1827-70]
 gi|167012638|sp|A7ZYG2|RUMB_ECOHS RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|189045734|sp|B1IWR3|RUMB_ECOLC RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|157066061|gb|ABV05316.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli HS]
 gi|169755666|gb|ACA78365.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli ATCC
           8739]
 gi|300411962|gb|EFJ95272.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           115-1]
 gi|310336744|gb|EFQ01911.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           1827-70]
          Length = 375

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F        +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWVRPQSFF--QTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++
Sbjct: 248 GLHCA--TPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|320109081|ref|YP_004184671.1| hypothetical protein AciPR4_3928 [Terriglobus saanensis SP1PR4]
 gi|319927602|gb|ADV84677.1| hypothetical protein AciPR4_3928 [Terriglobus saanensis SP1PR4]
          Length = 438

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 27/133 (20%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVSERFDTLQSDW 157
           R LD+ T  G   L + K        GVD S  ALE+A+ N   N   +  + D +++D 
Sbjct: 265 RALDICTYQGGFALHMAKVCD--SVTGVDQSRSALEVAERNLDLNRSQLKAQVDWVEADA 322

Query: 158 FSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
           F  +         FD IV +PP                   + + +G + G   Y+ ++ 
Sbjct: 323 FELLRAYDSDMEKFDTIVLDPPAFAKS--------------KRAAEGAMRG---YKEMSL 365

Query: 212 GVSRHLNKDGLCS 224
              R L   G+  
Sbjct: 366 RALRMLRPGGILV 378


>gi|269140060|ref|YP_003296761.1| 23S rRNA 5-methyluridine methyltransferase [Edwardsiella tarda
           EIB202]
 gi|267985721|gb|ACY85550.1| 23S rRNA 5-methyluridine methyltransferase [Edwardsiella tarda
           EIB202]
 gi|304559888|gb|ADM42552.1| 23S rRNA (Uracil-5-) -methyltransferase RumA [Edwardsiella tarda
           FL6-60]
          Length = 420

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 24/168 (14%)

Query: 22  VIVDPDSVLDDRQRFFLTNAIVRS------LKHESIHRILGWRDFY---NVRLTLSSDTF 72
           +++     L    R  L+    +           +  R+LG   +Y    +RL  +   F
Sbjct: 190 MVLRHLDPLALSDREALSAFARQRGLSLYLSDGGAPQRLLGEAPYYQIDGIRLDFNPQDF 249

Query: 73  E--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
                     +V+ ALA+   R ++    R+LDL  G G   L L + +   + VGV+  
Sbjct: 250 IQVNAAVNAQMVEQALAWLDVRADE----RVLDLFCGMGNFTLPLARRAQ--RVVGVEGV 303

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNP 172
            + +  A++NA  NG+S   +    +    V         FD I+ +P
Sbjct: 304 PELVATAQNNARNNGLS-NVEFFHQNLEEDVTRQAWAAQGFDKILLDP 350


>gi|121604357|ref|YP_981686.1| cyclopropane-fatty-acyl-phospholipid synthase [Polaromonas
           naphthalenivorans CJ2]
 gi|120593326|gb|ABM36765.1| Cyclopropane-fatty-acyl-phospholipid synthase [Polaromonas
           naphthalenivorans CJ2]
          Length = 410

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 25/140 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +  +L     +   R+L++G G GA+      E       GV +S + LE A      +G
Sbjct: 180 VRRALRMAGVKPGDRVLEIGCGWGALAEMATTEF-GASLTGVTLSTEQLEFALQRMARHG 238

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V+ + D    D+    +G FD I S         ++ +    R++ P             
Sbjct: 239 VAGQADLRLQDYRDINDGPFDAICS---------IEMVEAVGREYWPAY----------- 278

Query: 206 YRTIADGVSRHLNKDGLCSV 225
                  V R L   G   +
Sbjct: 279 ----FQAVKRLLKPGGRACI 294


>gi|257095491|ref|YP_003169132.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048015|gb|ACV37203.1| Cyclopropane-fatty-acyl-phospholipid synthase [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 420

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L R++ R   R+L++G G G       +E+   + VG+ +S   LE A+      G+  
Sbjct: 194 ILSRLDSRPGQRVLEIGCGWGGFAETAAREA-GLEVVGLTLSPAQLEFARERMQIAGLER 252

Query: 149 RFDTLQSDWFSSVEGLFDVIVS 170
           +      D+       FD IVS
Sbjct: 253 QVTLELRDYRELAGEPFDHIVS 274


>gi|72170183|ref|XP_788985.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115946048|ref|XP_001192571.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 231

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
             E  P    +    L              I DLG G G + +           +G DI 
Sbjct: 22  WLEQYPTRPHIAARMLHTIEASYGDISGHLIADLGCGCGMLSIGAAMLDAGL-CIGFDID 80

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDW----FSSVEGLFDVIVSNPPY 174
             ALEI + N     +    DT+QSD            FD ++ NPP+
Sbjct: 81  QDALEICQRNCEEFELP-CVDTVQSDLTKMEAGPWSKKFDTVIMNPPF 127


>gi|73668917|ref|YP_304932.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72396079|gb|AAZ70352.1| methyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 336

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 77/204 (37%), Gaps = 42/204 (20%)

Query: 12  CRVTGLSSHQ-------VIVDPDSVLDDRQRFFLTNAIVRSLKH-------ESIHRILGW 57
             + G S          ++ DP+  LD  +   + +A+   L H       + +  ++G 
Sbjct: 76  EDLLGFSPAYEVIGDIALLEDPE--LDKEKASRIADAL--LLTHSNIKTVLKPLTPVIG- 130

Query: 58  RDFYNVRLTLSSDTFEPRPETELL-------VDSALAFSLPRIEK---------RDVVRI 101
            +F      + +   EPR ET          VD   A+  PR+           +D   +
Sbjct: 131 -EFRVREFEVVAG--EPRTETIHREYGCRYKVDLERAYFTPRLSTERSRILSRVKDGDIV 187

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D+  G G   + + K     K + +D + +A+   + N + N  ++  + ++ D     
Sbjct: 188 VDMFAGVGPYSILIAKSKKPSKVLAIDKNPEAVRYLRENIILNS-AKNIEAIEGDAREEA 246

Query: 162 E---GLFDVIVSNPPYIESVIVDC 182
           +   G  D ++ N P+     +D 
Sbjct: 247 KKFAGTADHVIMNLPHSAFEFLDS 270


>gi|15602953|ref|NP_246025.1| ribosomal protein L11 methyltransferase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|38605464|sp|Q9CLW2|PRMA_PASMU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|12721427|gb|AAK03172.1| PrmA [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 293

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV++R     S+    
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADRLQLFLSE-DKP 219

Query: 161 VEGLFDVIVSN 171
            +   DV+V+N
Sbjct: 220 ADLKADVVVAN 230


>gi|326335509|ref|ZP_08201696.1| ribosomal protein L11 methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692275|gb|EGD34227.1| ribosomal protein L11 methyltransferase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 284

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           + V++LD+G GTG + + +           +DI    +E A  N   N        ++ +
Sbjct: 148 ENVKVLDMGCGTGILAI-MASLRGARDITAIDIDPWCVENATENVQQNNCPF-IKVMEGN 205

Query: 157 WFSSVEGLFDVIVSN 171
             + +   F +I++N
Sbjct: 206 ISTIIGEQFQLILAN 220


>gi|270290049|ref|ZP_06196275.1| cyclopropane-fatty-acyl-phospholipid synthase [Pediococcus
           acidilactici 7_4]
 gi|270281586|gb|EFA27418.1| cyclopropane-fatty-acyl-phospholipid synthase [Pediococcus
           acidilactici 7_4]
          Length = 391

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 32/182 (17%)

Query: 52  HRILGWRDFYNVRL----TLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  +G  DFY + L    T S   FE   ++      + +   + ++  +    +LD+G 
Sbjct: 115 HYDIGN-DFYKLWLDPTMTYSCAYFESDQDSLETAQMNKVRHIIRKLNPQPGKTLLDIGC 173

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G + L   KE    K VGV +S +  ++        G+S   +    D+    +  FD
Sbjct: 174 GWGTLMLTAAKEF-NLKVVGVTLSQEQYDLVNQRIQEEGLSGVAEVRLQDYRELGDEKFD 232

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I S                V  F+  +    G + L  Y    D V+++L  DG+  + 
Sbjct: 233 YITS----------------VGMFE-HV----GKENLGIY---FDNVAKYLKDDGVALI- 267

Query: 227 IG 228
            G
Sbjct: 268 HG 269


>gi|256826666|ref|YP_003150625.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum
           DSM 15641]
 gi|256582809|gb|ACU93943.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Cryptobacterium curtum
           DSM 15641]
          Length = 543

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 10/121 (8%)

Query: 61  YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +   +SS +F      +TE+L  +AL  +         + ILD   GTG + L    +
Sbjct: 350 CGLSFRISSHSFYQVNAVQTEVLYRTALEMA-ACTSSHQALTILDAYCGTGTIGLVAASQ 408

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNP 172
            P  + +G+D +  ++  A+ NAV NG++     L  D    +          DV++ +P
Sbjct: 409 VPNSQVIGIDNASSSIRDARQNAVHNGIA-NATFLCEDATDFLLHRAAASDSIDVLMMDP 467

Query: 173 P 173
           P
Sbjct: 468 P 468


>gi|254828268|ref|ZP_05232955.1| O-methyltransferase [Listeria monocytogenes FSL N3-165]
 gi|258600656|gb|EEW13981.1| O-methyltransferase [Listeria monocytogenes FSL N3-165]
          Length = 217

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 100 ASDRVKVLLTDAIEGAEEILAYGPFDAI 127


>gi|117618137|ref|YP_856751.1| methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117559544|gb|ABK36492.1| methyltransferase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 413

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 25/135 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQS 155
           +  R+L+    TG   +  LK     + V VD+S  AL+IA+ NA  NG+       ++ 
Sbjct: 237 EGKRVLNCFCYTGGFGVYALKGGAK-EVVNVDLSQNALDIARQNAELNGLDTSNTQFVRH 295

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D F  +         FDVIV +PP         L              G   G   Y+ I
Sbjct: 296 DVFKLLREYREKGDKFDVIVLDPPKFAESKAQLL--------------GACRG---YKDI 338

Query: 210 ADGVSRHLNKDGLCS 224
                + L   G+  
Sbjct: 339 NMLAFQLLAPGGVLL 353


>gi|154247051|ref|YP_001418009.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthobacter
           autotrophicus Py2]
 gi|154161136|gb|ABS68352.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthobacter
           autotrophicus Py2]
          Length = 421

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  + +LD+G+G G + L L  E    K  GV +S + L +++  A   G+++R +    
Sbjct: 175 RAGLDVLDIGSGWGGLGLYLA-EMAGAKVQGVTLSSEQLALSRHRAAERGLADRVNFTLR 233

Query: 156 DWFSSVEGLFDVIVS 170
           D +  VEG FD IVS
Sbjct: 234 D-YRDVEGAFDRIVS 247


>gi|297193973|ref|ZP_06911371.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297152029|gb|EDY66990.2| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 432

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  ++  R+LD+G G G++ +   +E    +  GV +S +    A+      G
Sbjct: 189 LDLVCRKLGLKEGDRLLDVGCGWGSMAVHAAREY-GARVTGVTLSREQALYARKRIADEG 247

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR                 
Sbjct: 248 LTDRIEIRVQDYRDVRDGPYDAISS-------IGMAEHVGRVR----------------- 283

Query: 206 YRTIADGVSRHLNKDGLCS 224
           YR  AD +   L   G   
Sbjct: 284 YREYADQLFSLLVPGGRLL 302


>gi|260220046|emb|CBA27192.1| Ribosomal protein L11 methyltransferase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 292

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                        R+LD G G+G + +   K     + + VDI   A++    NA  N V
Sbjct: 152 MCLRWIARNGGSGRVLDYGCGSGILAIGAAK-FGATEVIAVDIDQAAVDSTVLNAEANHV 210

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSN 171
                TL S    + +G+FDV+++N
Sbjct: 211 -----TLVSGLPEAAQGVFDVVLAN 230


>gi|215485990|ref|YP_002328421.1| 23S rRNA methyluridine methyltransferase [Escherichia coli O127:H6
           str. E2348/69]
 gi|312969074|ref|ZP_07783281.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           2362-75]
 gi|254766925|sp|B7UMV1|RUMB_ECO27 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|215264062|emb|CAS08404.1| 23S rRNA m(5)U747 methyltransferase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312286476|gb|EFR14389.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           2362-75]
 gi|323190681|gb|EFZ75950.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           RN587/1]
          Length = 375

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F+S +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFASAQGEVPELVLVNPP 309


>gi|326488038|dbj|BAJ89858.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531960|dbj|BAK01356.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 213

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +    +      + D G G G + +A           G+DI  ++LE+A+ NA   
Sbjct: 36  MLYTAENSFDDIAGKVVADFGCGCGTLAIASALLDAE-HVTGIDIDLQSLELAQENATDL 94

Query: 145 GVSERFDTLQSDWFS-SVEGLF-DVIVSNPPYIESVIVDCLG 184
            +    D +Q D  + +++GL  D +V NPP+        + 
Sbjct: 95  ELD--IDLIQCDIKNLNLKGLLVDTVVMNPPFGTKRKGADME 134


>gi|293397759|ref|ZP_06641965.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           F62]
 gi|291611705|gb|EFF40774.1| 50S ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           F62]
          Length = 311

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 178 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 236

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 237 L----PQGQFDVVVAN 248


>gi|194365731|ref|YP_002028341.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas
           maltophilia R551-3]
 gi|194348535|gb|ACF51658.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stenotrophomonas
           maltophilia R551-3]
          Length = 419

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +    ++++GTG G   +   +           IS +   +A       G
Sbjct: 179 LDRICQQLQLKPGDHVVEIGTGWGGFAVHAAQHY-GCHVTTTTISAEQHALATERVKAAG 237

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  R   L  D +  ++G +D +VS        +++ +G E                L  
Sbjct: 238 LQGRVTLLMQD-YRDLQGRYDKLVS------IEMIEAIGAEY---------------LDT 275

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y      + R L  DG+  +
Sbjct: 276 Y---MATLQRLLKPDGVALL 292


>gi|89068051|ref|ZP_01155468.1| ribosomal protein L11 methyltransferase, putative [Oceanicola
           granulosus HTCC2516]
 gi|89046290|gb|EAR52347.1| ribosomal protein L11 methyltransferase, putative [Oceanicola
           granulosus HTCC2516]
          Length = 288

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 20/118 (16%)

Query: 73  EPRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                       +   ++D+G GT  + +A   
Sbjct: 109 VPEGRVALLIEAAMAFGTGHHGTTLGCLKALDRLLAAGAEKRAVIDVGCGTAVLAMAAAH 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ----SDWFSSVEGLFDVIVSN 171
             P  + +  DI   A+E+A++N   NG+  R   L+         +    FD++ +N
Sbjct: 169 SWPG-EVLASDIDEVAVEVAEANVAANGLEGRVPCLEAAGFDAADIAAAAPFDLVFAN 225


>gi|300310016|ref|YP_003774108.1| cyclopropane-fatty-acyl-phospholipid synthase [Herbaspirillum
           seropedicae SmR1]
 gi|300072801|gb|ADJ62200.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I+ R    +LD+G G GA+ L   ++    + VGV +S     +A+      G
Sbjct: 163 IDHILEKIQLRPGQTLLDIGCGWGALVLRAAQKY-GARCVGVTLSRNQYALARERVEAAG 221

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R +    D +  V G FD I S
Sbjct: 222 LSDRIEIRLQD-YRDVTGSFDRITS 245


>gi|254671001|emb|CBA07760.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           alpha153]
          Length = 330

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 197 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 255

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 256 L----PQGQFDVVVAN 267


>gi|228472988|ref|ZP_04057745.1| ribosomal protein L11 methyltransferase [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275570|gb|EEK14347.1| ribosomal protein L11 methyltransferase [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 276

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           V++LD+G GTG + +             +DI    +E A  N   N   +     Q +  
Sbjct: 142 VKVLDMGCGTGILAIMAALRGAH-DITAIDIDPWCVENATENVQQNNC-DFITVKQGEVS 199

Query: 159 SSVEGLFDVIVSN 171
           +     +++I++N
Sbjct: 200 AIAGEKYNLILAN 212


>gi|160901890|ref|YP_001567471.1| RNA methyltransferase [Petrotoga mobilis SJ95]
 gi|160359534|gb|ABX31148.1| RNA methyltransferase, TrmA family [Petrotoga mobilis SJ95]
          Length = 387

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 30/187 (16%)

Query: 8   HSFLCRVTGLSSHQVI---VDPDSVLDDRQRFFLTNAIVRS-------LKHESIHRILGW 57
              L  VT L +          + +L+   +  + + I          +K + +  + G 
Sbjct: 141 EILLNLVTSLDNTYYQEVETWKEEMLNTNLKGNIVSIIQSKTESKANVVKADEMEILYGR 200

Query: 58  RDFY----NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
             FY    ++   +   +F       TE+L  +AL+++       +   + D  +GTG +
Sbjct: 201 DYFYEKILDLTFKIGPFSFFQTNTKGTEVLYQTALSYA------ENSDVVYDFYSGTGTI 254

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-----LFD 166
            L L  ++   K  G++I  +A+E AK NA+ N +    + +  D    V+        D
Sbjct: 255 SLLLANKAK--KVYGIEIIKEAVEAAKQNAILNNI-NNVEFVNKDVKDFVKQQSSTEKPD 311

Query: 167 VIVSNPP 173
            IV +PP
Sbjct: 312 YIVVDPP 318


>gi|33594830|ref|NP_882473.1| putative methyltransferase [Bordetella parapertussis 12822]
 gi|33599101|ref|NP_886661.1| putative methyltransferase [Bordetella bronchiseptica RB50]
 gi|33564906|emb|CAE39851.1| Putative methyltransferase [Bordetella parapertussis]
 gi|33575147|emb|CAE30610.1| Putative methyltransferase [Bordetella bronchiseptica RB50]
          Length = 281

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 6/88 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P P+       A+A  L   +      ++DLG+G G + +A +++      +GVDI  
Sbjct: 45  YVPTPDD------AVARMLEMADVTAQDTVIDLGSGDGRIAIAAVRDRGARSAMGVDIDP 98

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFS 159
           + +  A++NA   G+++R   +Q D F 
Sbjct: 99  ERIAEARANARKAGLADRVTFVQQDLFD 126


>gi|325135641|gb|EGC58258.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M0579]
          Length = 330

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 197 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 255

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 256 L----PQGQFDVVVAN 267


>gi|240047447|ref|YP_002960835.1| DNA methylase [Mycoplasma conjunctivae HRC/581]
 gi|239985019|emb|CAT05012.1| DNA methylase [Mycoplasma conjunctivae]
          Length = 210

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 65/155 (41%), Gaps = 21/155 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           +L++G    A+ + +    P  K   V+I  KA  +A+ N   N   ++   +  D+ + 
Sbjct: 1   MLEIGANNAALSIFVAHRDPKIKIDAVEIQRKATILAQENVNLNKKEQQIRIICQDFNTF 60

Query: 160 ------SVEGLFDVIVSNPPYI--ESVIVDCLGLEVRD--FDPRISLDGGIDGLSHYRTI 209
                  V   + +I +NPPY   ++ I+  +  E++   ++  ++L            +
Sbjct: 61  WKQQNKQVARKYQLIFANPPYYKQDTKIIKKVSSELKRAIYEIDLNL----------EQL 110

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
             G S+ + + G  ++ +   + VD++ +      
Sbjct: 111 VFGSSKIIEQKGRLALVLPIERFVDIIEVLRKYNF 145


>gi|297587203|ref|ZP_06945848.1| O-methyltransferase [Finegoldia magna ATCC 53516]
 gi|297575184|gb|EFH93903.1| O-methyltransferase [Finegoldia magna ATCC 53516]
          Length = 237

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 13/116 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           ++++ +  + F    ++ LL D A        + +    ++D+G GTG + L  +     
Sbjct: 11  DLKIIVDDEKFSFTIDSILLTDFA--------KMKKDTNLIDIGCGTGILLLRCMTLYNL 62

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL---FDVIVSNPPY 174
            K +G++I     ++ +     N +S   + +  D F +V+      D I+ NPPY
Sbjct: 63  SKCIGIEIQKDVADMLEETIAINNLS-NVEVINDD-FKNVDIKNDSIDNIIVNPPY 116


>gi|212275358|ref|NP_001130238.1| hypothetical protein LOC100191332 [Zea mays]
 gi|194688642|gb|ACF78405.1| unknown [Zea mays]
          Length = 176

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 5/102 (4%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +           + D G G G + +A          +G+DI  ++LE+A+ NA   
Sbjct: 1   MLYMAENSFNDITGKVVADFGCGCGTLAVASALLDAE-HVLGIDIDPQSLELAQENAADL 59

Query: 145 GVSERFDTLQSDWFS-SVEG-LFDVIVSNPPYIESVIVDCLG 184
            +    D + SD  + +++G   D +V NPP+        + 
Sbjct: 60  ELD--IDLVWSDIKNLNLKGVHVDTVVMNPPFGTRRNGADME 99


>gi|159027378|emb|CAO90565.1| prmA [Microcystis aeruginosa PCC 7806]
          Length = 298

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 72/260 (27%), Gaps = 60/260 (23%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP 74
             L    +I+     +   Q     +      +H  I  I         R  +      P
Sbjct: 62  LWLKQDALILGFSEPVTSWQLMDEEDWASSWKQHWQISEI-------GDRFLICPAWLNP 114

Query: 75  RPETELLV-----------------DSALAFSLPRIEKRDVVRIL-DLGTGTGAVCL-AL 115
               + LV                    L     R+      +I+ D+G G+G + + A+
Sbjct: 115 PENNQRLVIKIDPGSAFGTGTHPTTQLCLESLEMRLSSHPENKIIADIGCGSGILAIGAI 174

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQS---DWFSSVEGLFDVIVSN 171
           L  +   K   VDI   A+    SN   NG++ E     Q    +    +    D IV N
Sbjct: 175 LLGAK--KVYAVDIDPLAVNATYSNRHLNGINPENLAVNQGSVEELLELIPDGVDGIVCN 232

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
              +   I+  +    R   P                I           G+      + Q
Sbjct: 233 --ILAETIIALMPEITRLAKPTT------------WGILS---------GIL-----FTQ 264

Query: 232 KVDVVRIFESRKLFLVNAFK 251
              V  I E     +   +K
Sbjct: 265 AQAVTSILERHGWTVAALWK 284


>gi|157145077|ref|YP_001452396.1| cobalt-precorrin-6Y C(15)-methyltransferase [Citrobacter koseri
           ATCC BAA-895]
 gi|157082282|gb|ABV11960.1| hypothetical protein CKO_00808 [Citrobacter koseri ATCC BAA-895]
          Length = 189

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L +++      ++D+G GTG+V +    + P      ++ +  AL +   N  
Sbjct: 17  EAVRALALSKLDLHRASHLIDVGAGTGSVSIEAALQHPSLHVTAIERNPAALRLLDENRQ 76

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            +      D L  +   ++    D +                             GG  G
Sbjct: 77  -HFACGNIDILPGEAPMTMTEKADAVFM---------------------------GGSGG 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             H  T+ D   R L+  G   +
Sbjct: 109 --HLTTLIDWAMRQLHPGGRLVM 129


>gi|71896227|ref|NP_001026773.1| methyltransferase-like protein 16 [Gallus gallus]
 gi|82081052|sp|Q5ZIA0|MET16_CHICK RecName: Full=Methyltransferase-like protein 16; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|53136428|emb|CAG32543.1| hypothetical protein RCJMB04_28o5 [Gallus gallus]
          Length = 558

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 26/182 (14%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + + + +  +   P    R      V+  +       +KR + R +D+GTG   +   L 
Sbjct: 64  FGLTIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDADKRVLRRGIDIGTGASCIYPLLG 121

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLFDVI 168
                +  +  ++       AK N   N +S+            L        E ++D  
Sbjct: 122 STLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 181

Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GVSRH 216
           + NPP+  +            R   P     GG      +G  L   + I      + + 
Sbjct: 182 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKR 241

Query: 217 LN 218
           L 
Sbjct: 242 LR 243


>gi|301154691|emb|CBW14154.1| 23S rRNA m(5)U747 methyltransferase [Haemophilus parainfluenzae
           T3T1]
          Length = 391

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  + L +    F    +T  LV   L A +   ++   + ++ DL  G G   L   K 
Sbjct: 204 FNGIPLFIRPQGFF---QTNPLVAQGLYATAQDWVQDLPITKLWDLFCGVGGFGLHCAKA 260

Query: 119 SPF-----FKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWF--SSVEGLFDVIVS 170
                    + +G++IS  A++ A  +A   G+ + +F +L +  F  +  E   D+++ 
Sbjct: 261 LQDKHQQEVELIGIEISPSAIQAATQSAQVLGLNNVKFQSLDAANFALAQDENKPDLVIV 320

Query: 171 NPP 173
           NPP
Sbjct: 321 NPP 323


>gi|258622336|ref|ZP_05717361.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Vibrio mimicus VM573]
 gi|258585352|gb|EEW10076.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Vibrio mimicus VM573]
          Length = 440

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 30/185 (16%)

Query: 10  FLCRV---TGLSSHQVIVDPDSVLDDRQRFFLTNAIVR--------SLKHESIHRILGWR 58
            L  V    G ++  +++    VL ++ +  L++   +            E +  + G  
Sbjct: 195 LLGHVELVKGDNTQVLVLRHLGVLAEQDQQSLSDFATQKGLTLYLTLEAGE-LQHVQGEA 253

Query: 59  DFY---NVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
            +      RL+   + F    R   + +V+ AL +    +E     R+LDL  G G   L
Sbjct: 254 PYCEETGSRLSFLPNHFIQVNRAVNQQMVEQALNW----LEVNKQDRVLDLFCGLGNFTL 309

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDV 167
            L K++     VGV+   + ++ A  NA  N +       Q++    +      +  F  
Sbjct: 310 PLAKQAQD--VVGVEGVEEMVQHATHNAKLNQI-NNVAFYQANLEQDMTNASWAQQKFAK 366

Query: 168 IVSNP 172
           ++ +P
Sbjct: 367 VLLDP 371


>gi|240141329|ref|YP_002965809.1| Ribosomal protein L11 methyltransferase (L11 Mtase)
           [Methylobacterium extorquens AM1]
 gi|240011306|gb|ACS42532.1| Ribosomal protein L11 methyltransferase (L11 Mtase)
           [Methylobacterium extorquens AM1]
          Length = 305

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +  +++R    +LD+GTGTG +  A  K       V  D+  +A+  A+ NA  NG
Sbjct: 146 LRALVDELKRRRPAHVLDVGTGTGILGFAAAKVLRTP-VVAGDLDPEAVSTARGNARLNG 204

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
           +        +       ++    FDV+ +N
Sbjct: 205 LGPFMRFYHAPGVRHALANRPRGFDVVFAN 234


>gi|159899628|ref|YP_001545875.1| 50S ribosomal protein L11 methyltransferase [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|226710089|sp|A9B5V4|PRMA_HERA2 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|159892667|gb|ABX05747.1| ribosomal protein L11 methyltransferase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 321

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 59/222 (26%), Gaps = 49/222 (22%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLVDSA---------------LAFSLPRIEKR 96
           W++ Y       R  +     E  P    +V +                L   L  + + 
Sbjct: 103 WKEHYRTRRIGQRFVIVPSWLEYEPAENDVVLNLDPGMAFGTGLHPTTQLCLELMELIEF 162

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LDLG G+G + +   K     + + +D    A+E    NA  N        L+  
Sbjct: 163 NNTTVLDLGCGSGILAVGAAKLGSQ-RVLALDTDPIAVEATAENARINHAETLVTALEGS 221

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS-- 214
              +    +                      R  +         D       I   V   
Sbjct: 222 LGDAPLEHWLGW--------EGAQLGTPQSYRHHN-------EFD--VILANILAKVHVV 264

Query: 215 ------RHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVN 248
                   L   G+      I   +  DVV  F++  L  V 
Sbjct: 265 LGNDYLAALKPGGVLITSGIINEREA-DVVAAFDAVGLEQVE 305


>gi|81428348|ref|YP_395348.1| ribosomal protein L11 methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
 gi|123564418|sp|Q38XP2|PRMA_LACSS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|78609990|emb|CAI55038.1| Ribosomal protein L11 methyltransferase [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 300

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 52/212 (24%)

Query: 55  LGWRDFYNVR-----LTLSSDT--FEPRPETELLVD--------------SALAFSLPRI 93
             W+ +Y        LT+      ++P  E E L+               + L+  +  +
Sbjct: 96  TAWKKYYQPTRLTRFLTVVPSWTDYQPTDEREALIRMDPGMAFGTGTHPTTHLSVQMLEM 155

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             R   +++D+GTG+G + +A             D+   A++ A +N   N V++     
Sbjct: 156 VLRGGEQLIDVGTGSGVLSIA-AAHLGVQDIRAYDVDQVAVDAAVANFDLNPVTQGIIAK 214

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +D    + G  DVIV+N           +   V                     +   V
Sbjct: 215 PNDLLHGITGAADVIVAN-----------MLPVVLV------------------PLIPQV 245

Query: 214 SRHLNKDGLCSVEIGYNQKVDV-VRIFESRKL 244
              L + G   +     +K  V      +  L
Sbjct: 246 PALLKEGGHLLLAGIITEKEAVIRETLSANGL 277


>gi|47095452|ref|ZP_00233062.1| O-methyltransferase family protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|254898336|ref|ZP_05258260.1| hypothetical protein LmonJ_00935 [Listeria monocytogenes J0161]
 gi|254912172|ref|ZP_05262184.1| O-methyltransferase family protein [Listeria monocytogenes J2818]
 gi|284801888|ref|YP_003413753.1| hypothetical protein LM5578_1643 [Listeria monocytogenes 08-5578]
 gi|284995030|ref|YP_003416798.1| hypothetical protein LM5923_1595 [Listeria monocytogenes 08-5923]
 gi|47016273|gb|EAL07196.1| O-methyltransferase family protein [Listeria monocytogenes str.
           1/2a F6854]
 gi|284057450|gb|ADB68391.1| hypothetical protein LM5578_1643 [Listeria monocytogenes 08-5578]
 gi|284060497|gb|ADB71436.1| hypothetical protein LM5923_1595 [Listeria monocytogenes 08-5923]
 gi|293590145|gb|EFF98479.1| O-methyltransferase family protein [Listeria monocytogenes J2818]
          Length = 217

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 100 ASDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|323352649|ref|ZP_08087619.1| O-methyltransferase [Streptococcus sanguinis VMC66]
 gi|322121685|gb|EFX93431.1| O-methyltransferase [Streptococcus sanguinis VMC66]
          Length = 227

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N   +   ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKHDSRQQIAL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAMDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|257455393|ref|ZP_05620628.1| ribosomal protein L11 methyltransferase [Enhydrobacter aerosaccus
           SK60]
 gi|257447355|gb|EEV22363.1| ribosomal protein L11 methyltransferase [Enhydrobacter aerosaccus
           SK60]
          Length = 302

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 12/99 (12%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T L +D      L          ++D G G+G + +A L      +   VDI  +A+   
Sbjct: 142 TRLCIDWLTEQPLQ------GKVVIDYGCGSGILGIAALLLGAK-QVYAVDIDPQAVLAT 194

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEG-----LFDVIVSN 171
             NA  N V+ +      + FS           D+I +N
Sbjct: 195 HQNAERNKVANQLQAFLPEQFSDYCKEQAILPVDLITAN 233


>gi|238764616|ref|ZP_04625562.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC
           33638]
 gi|238697206|gb|EEP89977.1| Ribosomal protein L11 methyltransferase [Yersinia kristensenii ATCC
           33638]
          Length = 299

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-LQSDWFS 159
           ++D G G+G + +A LK     + +G+DI  +A++ ++ NA  NGVSER +  L  D  +
Sbjct: 167 VIDFGCGSGILAIAALKLGAK-RAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPA 225

Query: 160 SVEGLFDVIVSN 171
            +    DV+V+N
Sbjct: 226 DLSA--DVVVAN 235


>gi|257066209|ref|YP_003152465.1| Methyltransferase type 11 [Anaerococcus prevotii DSM 20548]
 gi|256798089|gb|ACV28744.1| Methyltransferase type 11 [Anaerococcus prevotii DSM 20548]
          Length = 275

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 43/216 (19%)

Query: 52  HRILGWRD----FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
             I G+      F+ + + +    F+   E   L  + +  +   ++  D    LD+G G
Sbjct: 58  ALIFGYATLKLTFFAIWMRVLHRAFDF-NEKRKLAKTIIERTADYVKIPDGGLGLDVGCG 116

Query: 108 TGAVCLALLKESPFFKGVGVDI------SCKALEIAKSNAVTNGV-SERFDTLQSDWFSS 160
           +GA+ +A  K++     VG DI      S  +  + ++NA   G+ + RF+   +     
Sbjct: 117 SGALTIACAKKNQKATMVGCDIWKGSYKSEFSKALCENNAKLEGIENVRFEEGNAVNLPF 176

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
            +  FD + SN  Y+                       G +     + +   + R L K 
Sbjct: 177 EDESFDALTSN--YVYHN------------------VAGQN----KQRLLLEIFRVLKKG 212

Query: 221 GLCSVEIG------YNQKVDVVRIFESRKLFLVNAF 250
           G+  +         Y      +   +      V   
Sbjct: 213 GIFVI-HDLMSKSRYGDMNKFMEKLKKDGYEDVQLI 247


>gi|254509531|ref|ZP_05121598.1| ribosomal protein L11 methyltransferase [Rhodobacteraceae bacterium
           KLH11]
 gi|221533242|gb|EEE36230.1| ribosomal protein L11 methyltransferase [Rhodobacteraceae bacterium
           KLH11]
          Length = 292

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 69/195 (35%), Gaps = 50/195 (25%)

Query: 74  PRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLKE 118
           P     LL+++A+AF                    +     ++ D+G GT  + +A    
Sbjct: 110 PDGRIPLLIEAAMAFGTGHHGTTLGCLKALDYLLDKGFTASKVADIGCGTAVLAMA-AAR 168

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESV 178
                 +  DI   A+++A++N   NG++     +++  F   +       S+ PY    
Sbjct: 169 VWDGDILASDIDQVAVDVAEANLKANGMAGAVHCVEAAGFDHPDLK-----SHAPY---- 219

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-----EIGYNQKV 233
             D +   +    P ++L             +  ++ +L + G   +     E    Q  
Sbjct: 220 --DLIFANILKG-PLVAL-------------SPEIAANLREGGQAILSGLLNE----QAD 259

Query: 234 DVVRIFESRKLFLVN 248
           DVV ++      LV 
Sbjct: 260 DVVSVYLQNGFNLVR 274


>gi|257059901|ref|YP_003137789.1| methyltransferase type 12 [Cyanothece sp. PCC 8802]
 gi|256590067|gb|ACV00954.1| Methyltransferase type 12 [Cyanothece sp. PCC 8802]
          Length = 441

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           ILD+  G+G   L+L + +P  K +G+DIS  +LE+A++    +G    +F  +  +  S
Sbjct: 62  ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHGHDQVKFHLMSLEDVS 121

Query: 160 SVEGLFDVI 168
            +   FD I
Sbjct: 122 QLNLKFDYI 130


>gi|160947552|ref|ZP_02094719.1| hypothetical protein PEPMIC_01487 [Parvimonas micra ATCC 33270]
 gi|158446686|gb|EDP23681.1| hypothetical protein PEPMIC_01487 [Parvimonas micra ATCC 33270]
          Length = 180

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 13/137 (9%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G +    ++L LS   +  RP T+ + +S         E  +   +LDL  G+GA+ +
Sbjct: 4   ISGKK--RGLKL-LSPMDYSVRPTTDKIKESIFNILF---EIGESSVVLDLFCGSGAIGI 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDV 167
             L      K    D S  +++I K N    G+  +   ++ ++   +         FD 
Sbjct: 58  EFLSRGAE-KVYFCDFSDDSIKITKRNLENAGLLTKSIIMKKNYMDCLNYFYSNDLKFDY 116

Query: 168 IVSNPPYIESVIVDCLG 184
           I  +PPY    I   L 
Sbjct: 117 IFLDPPYKYEYIEKTLD 133


>gi|330818134|ref|YP_004361839.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           gladioli BSR3]
 gi|327370527|gb|AEA61883.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           gladioli BSR3]
          Length = 406

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I+ +   R+LD+G G GA+ L   ++      VGV +S    ++A       G
Sbjct: 158 IDHILTKIQLQPGQRLLDIGCGWGALVLRAAQKF-GAHCVGVTLSQNQFDLATERVRRAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  + +    D +  VEG FD I S
Sbjct: 217 LENQIEIRLQD-YRDVEGQFDRITS 240


>gi|239998173|ref|ZP_04718097.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|240127432|ref|ZP_04740093.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268594025|ref|ZP_06128192.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
 gi|268547414|gb|EEZ42832.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           35/02]
          Length = 295

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|257064807|ref|YP_003144479.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
           subunit,precorrin-6Y C5,15-methyltransferase
           (decarboxylating), CbiT subunit [Slackia
           heliotrinireducens DSM 20476]
 gi|256792460|gb|ACV23130.1| precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE
           subunit,precorrin-6Y C5,15-methyltransferase
           (decarboxylating), CbiT subunit [Slackia
           heliotrinireducens DSM 20476]
          Length = 451

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A ++ ++       + D+G+GTG++ +A  + +   +   V++  +A+E+ + N  
Sbjct: 279 EEIRAVAVSKLGIAPDSVVWDVGSGTGSITVACARAACAGQVHAVEMRPEAVELTRRNVS 338

Query: 143 TNGVSERFDTLQSDWFSSVEGL 164
             G+       Q     ++ GL
Sbjct: 339 KFGLG-NVTVTQGRAPEALAGL 359


>gi|163785247|ref|ZP_02179916.1| ribosomal protein L11 methyltransferase [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159879486|gb|EDP73321.1| ribosomal protein L11 methyltransferase [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 208

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++LD G G+G + +A  K         VDI  +A+E  K+NA  N V         
Sbjct: 137 NPHDKVLDAGCGSGVLSIAAAKLGANP-VDAVDIHKEAVEECKTNAWENEVKINCQLRDV 195

Query: 156 DWFSSVEGLFDVIVSN 171
              S +   +DVI++N
Sbjct: 196 ---SQINEKYDVIIAN 208


>gi|124485543|ref|YP_001030159.1| hypothetical protein Mlab_0720 [Methanocorpusculum labreanum Z]
 gi|124363084|gb|ABN06892.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z]
          Length = 234

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 30/167 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
            D++N R T     +  R   E  ++       P I     + ++++GTG G   LAL  
Sbjct: 7   ADYWNWRSTSYHQEYMSRITDE--IEFWERIFTPIIPAGKHLNVIEVGTGPGI--LALAL 62

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
                   G+D+S + ++ A++NA   G++  F    ++      G  D+I+S   Y+  
Sbjct: 63  AKMGHTVTGIDLSPEMVKKAQANAEKLGITAAFREGDAENLDLDAGSADLIIS--KYLMW 120

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
            +                               +G ++ L   G   
Sbjct: 121 TLPHP------------------------DAFLNGANKILTPGGQII 143


>gi|6572609|gb|AAF17319.1|AF139337_1 microcystin synthetase [Microcystis aeruginosa]
 gi|6572611|gb|AAF17320.1|AF139338_1 microcystin synthetase [Microcystis aeruginosa]
 gi|6572613|gb|AAF17321.1|AF139339_1 microcystin synthetase [Microcystis aeruginosa UWOCC MRC]
 gi|6572615|gb|AAF17322.1|AF139340_1 microcystin synthetase [Microcystis aeruginosa UWOCC MRD]
 gi|6572623|gb|AAF17326.1|AF139344_1 microcystin synthetase [Microcystis sp. UWOCC CBS]
          Length = 440

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 86/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRSLKHES-----IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +  +  S     I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSTDSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPKL-EQVRLLHSTADKFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|59800510|ref|YP_207222.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae FA
           1090]
 gi|81311265|sp|Q5FAH7|PRMA_NEIG1 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|59717405|gb|AAW88810.1| putative ribosomal protein L11 methyltransferase [Neisseria
           gonorrhoeae FA 1090]
          Length = 295

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|50313462|gb|AAT74601.1| cyclopropane fatty acid synthase [Gossypium hirsutum]
          Length = 865

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 21/180 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +    +  SS  F    E   +     ++  + +        +LD+G G G++ +  +K 
Sbjct: 586 YLGKMMQYSSGVFRTGEEHLDVAQRRKISSLIEKARIEKRHEVLDIGCGWGSLAIETVKR 645

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
           +   K  G+ +S + L+ A+      G+ +    L  D+     E  FD I+S    +E 
Sbjct: 646 T-GCKYTGITLSEQQLKYAQEKVKEAGLQDNIKILLCDYRQLPKEHQFDRIISV-EMVEH 703

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI---------ADGVSRHLN----KDGLCS 224
           V  + +    R  D  +      DGL   + I             +  L       G   
Sbjct: 704 VGEEYIEEFYRCCDQLL----KEDGLFVLQFISIPEELSKEIQQTAGFLKEYIFPGGTLL 759


>gi|186686438|ref|YP_001869634.1| methyltransferase type 11 [Nostoc punctiforme PCC 73102]
 gi|186468890|gb|ACC84691.1| Methyltransferase type 11 [Nostoc punctiforme PCC 73102]
          Length = 295

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 32/194 (16%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
           H I G    YN  ++    T    P  E +V  AL  ++    K    RILDLG GTG+ 
Sbjct: 59  HGITGGYLTYNAAVSYDPITQYVVPPNETIVRQALIDAV----KVKPRRILDLGCGTGST 114

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            L L +  P  + +G+D+S   L  A+  A  +G+   +    ++  S  +  FD++ + 
Sbjct: 115 TLMLKRAFPEAEVIGLDLSPYMLVRAEDKARNSGLEIVWRHGNAEKTSFRDATFDLVTA- 173

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN- 230
                S++      EV      ++             I     R L   G   +  G   
Sbjct: 174 -----SLLFHETPNEV-----SLA-------------ILQESFRLLVTGGQVLILDGNQK 210

Query: 231 ---QKVDVVRIFES 241
              Q   +  +FE 
Sbjct: 211 TLRQLEWLNDVFEE 224


>gi|329947046|ref|ZP_08294458.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328526857|gb|EGF53870.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 196

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +      P  E    V  AL   L      D  R+LDL  G+GA+ L        
Sbjct: 11  GRRIEVPRSGTRPTSER---VREALFARLDHYGVLDGARVLDLCAGSGALGLEAASRGAD 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVS--ERFDTLQSDWFSSVEG-LFDVIVSNPPY--IE 176
              + VD S  A +  + N    G+            + +   G   D+++ +PPY   E
Sbjct: 68  -DVMLVDFSRAATDTCRRNIRVLGLDGVHAVTAKADAFLTGAAGAPVDLVLIDPPYDLSE 126

Query: 177 SVIVDCLGLEVRDFDPRI 194
             +   L   +R  DP +
Sbjct: 127 EELTAILSPLIRREDPWL 144


>gi|326801093|ref|YP_004318912.1| methyltransferase type 11 [Sphingobacterium sp. 21]
 gi|326551857|gb|ADZ80242.1| Methyltransferase type 11 [Sphingobacterium sp. 21]
          Length = 179

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P  + +V++ L  +           + DLG G G + +   K+    K VG+DI  + ++
Sbjct: 35  PTKQEVVEAMLTLA----NVGPNDMLYDLGCGDGRIVVTAAKKF-GAKAVGIDIDPERIQ 89

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSS 160
            A+ NA    V  +   LQ D F +
Sbjct: 90  EARENAQKAAVENKVAFLQQDLFKA 114


>gi|220935907|ref|YP_002514806.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997217|gb|ACL73819.1| putative RNA methylase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 426

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 67/192 (34%), Gaps = 44/192 (22%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRD-------------------V 98
           R+   + L +     E  PET  L +    F  P +  +                     
Sbjct: 166 RELEGLDLYMRPALGE-VPETVTLTEHGARFHAPLLSGQKTGWFFDQRDNRAWLARVSRG 224

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           +++LDL +  GA  +             VD S  ALE   +NA  NGV +R   ++ D F
Sbjct: 225 MKVLDLFSYVGAWGVQAALNGAES-VTCVDASGDALESMAANAAENGVGDRVSGVKGDAF 283

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             ++        FDV++++PP       D                   +G + YR +   
Sbjct: 284 EVLKQLREDQARFDVVITDPPAFIKRRKDV-----------------KEGTAAYRRLNQM 326

Query: 213 VSRHLNKDGLCS 224
             + + KDGL  
Sbjct: 327 AMQVMAKDGLLI 338


>gi|158422153|ref|YP_001523445.1| cyclopropane-fatty-acyl-phospholipid synthase [Azorhizobium
           caulinodans ORS 571]
 gi|158329042|dbj|BAF86527.1| cyclopropane-fatty-acyl-phospholipid synthase [Azorhizobium
           caulinodans ORS 571]
          Length = 419

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 26/130 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +++LD+G G G + L +  E       GV +S + L +A+      G+    D    
Sbjct: 172 RPGLKLLDIGCGWGGLGLYM-SEVGGADVTGVTLSKEQLAVAQGRVKERGLDRHVDFRLQ 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           D +  V   FD IVS                V  F+          G++HY T       
Sbjct: 231 D-YRDVPETFDRIVS----------------VGMFE--------HVGVAHYGTFFRKAHD 265

Query: 216 HLNKDGLCSV 225
            L +DG+  +
Sbjct: 266 LLKEDGVMML 275


>gi|111022802|ref|YP_705774.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus jostii RHA1]
 gi|110822332|gb|ABG97616.1| rRNA (guanine-N(2)-)-methyltransferase [Rhodococcus jostii RHA1]
          Length = 380

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 23/140 (16%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   LPR+       + DLG GTG + ++L +  P    +  D S  A+  A + A  NG
Sbjct: 227 LLDFLPRVNPGARAAV-DLGCGTGILAVSLARLLPDVSVIATDQSSAAVASAAATARANG 285

Query: 146 VSERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +  +  TL+ D  S++     DV++ NPP+     V                 GG     
Sbjct: 286 LDGQVSTLRDDAMSTLATDSQDVVLCNPPFHVGAAVHT---------------GGAS--- 327

Query: 205 HYRTIADGVSRHLNKDGLCS 224
               +     R L   G   
Sbjct: 328 ---KMFAEAGRVLRPGGELW 344


>gi|85374372|ref|YP_458434.1| methlytransferase, UbiE/COQ5 family protein [Erythrobacter
           litoralis HTCC2594]
 gi|84787455|gb|ABC63637.1| methlytransferase, UbiE/COQ5 family protein [Erythrobacter
           litoralis HTCC2594]
          Length = 274

 Score = 56.3 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L     R + R LD+G G G + LAL +  P  + +G+D+S   + +A+       V
Sbjct: 31  DRLLGAASARRITRALDVGCGAGELSLALARGHPHAQFIGLDVSEALVAVARQRGEHL-V 89

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
           + +F+   +  +   +   D+IVS
Sbjct: 90  NAQFEVGDASRWRDADFHPDLIVS 113


>gi|196233324|ref|ZP_03132169.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
 gi|196222629|gb|EDY17154.1| Methyltransferase type 11 [Chthoniobacter flavus Ellin428]
          Length = 343

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 74/231 (32%), Gaps = 58/231 (25%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           R +      + GL    + V   +   + Q + +     +    + +    G+       
Sbjct: 41  RQAR-LQAHIDGLRRSPIAVQTHAA--NEQHYEVPTHFYQYALGKRLKYSSGYWP----- 92

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
             +  +T +         +  LA +  R E  D  RIL+LG G G++ L + ++ P  + 
Sbjct: 93  --VGVNTLDEAE------EKMLALTCERAELADGQRILELGCGWGSLSLWMAEKYPQARI 144

Query: 125 VGVD--------ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
             V         I  +A       A     +    T   + F  +   FD +VS      
Sbjct: 145 TAVSNSRTQKEHIDAEA-------AQRGWPNLTIITADMNVFD-IAETFDRVVS------ 190

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     V  F+           + +Y+ +   V+R L   G   V I
Sbjct: 191 ----------VEMFEH----------MKNYQLLLARVARWLAPGGKLFVHI 221


>gi|317177789|dbj|BAJ55578.1| cyclopropane fatty acid synthase [Helicobacter pylori F16]
          Length = 389

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|269139581|ref|YP_003296282.1| 23S rRNA metyluridine methyltransferase [Edwardsiella tarda EIB202]
 gi|267985242|gb|ACY85071.1| 23S rRNA metyluridine methyltransferase [Edwardsiella tarda EIB202]
 gi|304559469|gb|ADM42133.1| 23S rRNA (Uracil-5-) -methyltransferase RumB [Edwardsiella tarda
           FL6-60]
          Length = 377

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  V L +   +F    +T   V  AL A +   ++   V  + DL  G G   L     
Sbjct: 198 FNGVPLYIRPQSFF---QTNPAVAQALYAQARDWVQALGVTEMWDLFCGVGGFGLHCA-- 252

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIV-SNPP 173
           +P     G++IS +A+  A+ +A   G+    F  L S  F+        +V  NPP
Sbjct: 253 TPEMTLTGIEISAEAIACARRSAAQLGLTQVNFAALDSSAFADARSAAPQLVLVNPP 309


>gi|261839775|gb|ACX99540.1| cyclopropane-fatty-acyl-phospholipid synthase [Helicobacter pylori
           52]
          Length = 389

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|221199193|ref|ZP_03572237.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD2M]
 gi|221206610|ref|ZP_03579622.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD2]
 gi|221173265|gb|EEE05700.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD2]
 gi|221180478|gb|EEE12881.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans CGD2M]
          Length = 406

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I      R+LD+G G GA+ L   ++    + VGV +S    ++A       G
Sbjct: 158 IDHILTKIRLEPGQRLLDIGCGWGALVLRAAQKF-GAQCVGVTLSQNQFDLATERVKAAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R +    D +  +EG FD I S
Sbjct: 217 LEDRIEIRLQD-YREIEGQFDRITS 240


>gi|188527821|ref|YP_001910508.1| cyclopropane fatty acid synthase (cfa) [Helicobacter pylori Shi470]
 gi|188144061|gb|ACD48478.1| cyclopropane fatty acid synthase (cfa) [Helicobacter pylori Shi470]
          Length = 389

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|157781228|gb|ABD83951.2| McyA [Microcystis aeruginosa DK1]
          Length = 443

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 43/181 (23%)

Query: 80  LLVDSALAFSLPRIE---KRDVVRILDLGTGTGAVCLALLKESPFFKG-VGVDISCKALE 135
           +LV     +   +++    +   ++L++G GTG +   +    P  +   G DIS  AL+
Sbjct: 77  ILVAQMREWLDDKVKVILAQQPKKVLEIGCGTGLILFQVA---PHCQCYWGTDISSVALD 133

Query: 136 -IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
            I + N     + E+   L S  D F  +E   FD I+ N               V  + 
Sbjct: 134 HIQRINQEGPQL-EQVRLLHSTADNFEGLESERFDTIILN--------------SVVQYF 178

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI-FESRKLFLVNAF 250
           P I          +   + +G  + L   G   +        DV  +         V  +
Sbjct: 179 PHI---------DYLLRVLEGAIKVLTPGGCIFL-------GDVRNLQLMEAFHADVELY 222

Query: 251 K 251
           K
Sbjct: 223 K 223


>gi|21223465|ref|NP_629244.1| methyltransferase [Streptomyces coelicolor A3(2)]
 gi|5541919|emb|CAB51133.1| putative methyltransferase [Streptomyces coelicolor A3(2)]
 gi|14717101|emb|CAC44207.1| putative methyltransferase [Streptomyces coelicolor A3(2)]
          Length = 208

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 44/185 (23%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F++           PRP    LV++                 LDLG G+G   L L +  
Sbjct: 9   FWDGVYAARPAPDAPRPNVR-LVETV--------TGLPPGDALDLGCGSGGDALWLARR- 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             ++   VDIS  A E    +A T+G+ +  D ++ D   S  EG FD++ ++  Y+ + 
Sbjct: 59  -GWRVTAVDISGVAAERLAGHARTHGLGDLVDAVRHDLRDSFPEGRFDLVSAH--YLHTP 115

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IG------YNQ 231
                      FD   +            ++  G +  L   G   V   G      ++Q
Sbjct: 116 -----------FDLDRA------------SVLRGAAHALRPGGRLLVVDHGSTAPWSWDQ 152

Query: 232 KVDVV 236
             D  
Sbjct: 153 DPDAR 157


>gi|317163463|gb|ADV07004.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 311

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 178 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 236

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 237 L----PQGQFDVVVAN 248


>gi|297623439|ref|YP_003704873.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera
           radiovictrix DSM 17093]
 gi|297164619|gb|ADI14330.1| ubiquinone/menaquinone biosynthesis methyltransferase [Truepera
           radiovictrix DSM 17093]
          Length = 270

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 49/142 (34%), Gaps = 26/142 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A   +   + +   +R+LD+ TGT  + LAL +  P  + VGVD +   L I +  A  
Sbjct: 49  QATRAAFRGLPQGVPLRVLDVATGTADLALALKRARPQAEVVGVDFAEPMLAIGRRKARA 108

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+S R +          +  FDV+              +   +R+F             
Sbjct: 109 RGLSVRLELGDGLALPYGDAQFDVV-------------TIAYGLRNF------------- 142

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
           +          R L   G   V
Sbjct: 143 ADIDRGLREFLRVLRPGGRLVV 164


>gi|293401669|ref|ZP_06645811.1| type I restriction-modification system, M subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304927|gb|EFE46174.1| type I restriction-modification system, M subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 508

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 37/192 (19%)

Query: 54  ILGWR-DFYNVRLTLSSDT-----FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           +LG   ++                + P    + +V+         ++  D  R+ D   G
Sbjct: 151 LLGRTYEYCIQEFAAHEGVKGGEFYTPSSIVKTIVEI--------LKPFDNCRVYDPCCG 202

Query: 108 TGAVCL-------ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-WFS 159
           +G + +       A           G + +    ++AK N    G+   F    +D +F 
Sbjct: 203 SGGMFVQSVKFLQAHSGNRNRISVYGQESNADTWKMAKMNMAIRGIDANFGPYHADTFFE 262

Query: 160 SVEG--LFDVIVSNPPY-IESVIVDCLGLE---VRDFDPRISLDGGIDGLSHYRTIADGV 213
            +      D I++NPP+ + +   D L  +   V    P      G    +  + +    
Sbjct: 263 DLHPTLKADFIMANPPFNLSNWGQDKLKEDKRWVYGIPP-----AGNANFAWIQHMIH-- 315

Query: 214 SRHLNKDGLCSV 225
             HL  +G   +
Sbjct: 316 --HLAPNGKIGL 325


>gi|194467527|ref|ZP_03073514.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri 100-23]
 gi|194454563|gb|EDX43460.1| Cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri 100-23]
          Length = 391

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 29/148 (19%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L +++ +    +LD+G G G + L   KE    K  GV +S +   + K   
Sbjct: 151 VDKV-HHILKKLDPKPGKTLLDIGCGWGTLMLTAAKEY-GLKVTGVTLSEEQYRLVKERI 208

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G+ +  +    D+    +  +D I S                V  F+      G  +
Sbjct: 209 EKEGLQDVAEVKLIDYRELGDQKWDYITS----------------VGMFE----HVGKEN 248

Query: 202 -GLSHYRTIADGVSRHLNKDGLCSVEIG 228
            GL         +  +L  DG+  +  G
Sbjct: 249 LGLYF-----KDIQGYLTDDGVALI-HG 270


>gi|145641855|ref|ZP_01797430.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           R3021]
 gi|145273477|gb|EDK13348.1| 16S ribosomal RNA m2G1207 methyltransferase [Haemophilus influenzae
           22.4-21]
          Length = 112

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 23/98 (23%)

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
             DI   ALE A+     N +    +   SD FS +EG FD+I+SNPP+ + +       
Sbjct: 1   MTDIHAMALESARKTLSENQLQG--EVYASDVFSDIEGKFDLIISNPPFHDGIDTAYRT- 57

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
                                + +      HLN+ G  
Sbjct: 58  --------------------VKELITQAKWHLNQGGEL 75


>gi|75859106|ref|XP_868893.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4]
 gi|40747596|gb|EAA66752.1| hypothetical protein AN9511.2 [Aspergillus nidulans FGSC A4]
          Length = 187

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 6/103 (5%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  +      +   ++D+  G G   +A  +   + +   ++     L  A
Sbjct: 71  TPEPVATKIAEQVAHASPPERKILVDVFAGAGGNTIAFARSGHWKRVYAIEKDPATLRCA 130

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPY 174
           + NA   GV+++    Q D F  ++        + V+ ++PP+
Sbjct: 131 QHNAEVYGVADKITWFQGDCFDILKSQLKDLAPYSVLFASPPW 173


>gi|149915606|ref|ZP_01904132.1| ribosomal protein L11 methyltransferase, putative [Roseobacter sp.
           AzwK-3b]
 gi|149810498|gb|EDM70341.1| ribosomal protein L11 methyltransferase, putative [Roseobacter sp.
           AzwK-3b]
          Length = 292

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 62/194 (31%), Gaps = 52/194 (26%)

Query: 73  EPRPETELLVDSALAFSLPRI---------------EKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    +      ++D+G GT  + +   +
Sbjct: 109 VPADAEPLLIEAAMAFGTGHHGTTQGCLRALDRLVGQGFAAHSVIDIGCGTAVLAMGAAR 168

Query: 118 ESPFF---KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV----EGLFDVIVS 170
             P       +  DI   A+E+A++N + N +  R   L++             FD+I +
Sbjct: 169 VWPDSVLGTVLASDIDEVAVEVARANVIANDLGGRVTCLEAMGLDHPVIASAAPFDLIFA 228

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGY 229
           N   I    +  +  +V                          +  L   G   +  +  
Sbjct: 229 N---ILKGPLIDMAGDV--------------------------TAALAPGGRVILSGVLN 259

Query: 230 NQKVDVVRIFESRK 243
            Q  +V+ ++    
Sbjct: 260 EQADEVIAVYRDAG 273


>gi|109947810|ref|YP_665038.1| site specific DNA-methyltransferase [Helicobacter acinonychis str.
           Sheeba]
 gi|109715031|emb|CAK00039.1| Site specific DNA-methyltransferase [Helicobacter acinonychis str.
           Sheeba]
          Length = 377

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 56/172 (32%), Gaps = 37/172 (21%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y + +      F P      +VD  L        +++   +L+   G G    + LK  
Sbjct: 1   MYKLDVKTLGQVFTPDN----IVDFMLHL------RQNQGSVLEPSAGDG----SFLKRL 46

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESV 178
                VG++I  K       NA           L  D+F   +E  FD I+ NPPY++  
Sbjct: 47  KKA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHK 90

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
            +     E  ++     L      L  Y    +    HL   G        +
Sbjct: 91  DIAPSTKEKLNY----GLFDERSNL--YLFFIEKAINHLKPKGELIFITPRD 136


>gi|332257559|ref|XP_003277873.1| PREDICTED: putative methyltransferase METT10D [Nomascus leucogenys]
          Length = 561

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|325284032|ref|YP_004256573.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus
           MRP]
 gi|324315841|gb|ADY26956.1| Ribosomal protein L11 methyltransferase [Deinococcus proteolyticus
           MRP]
          Length = 275

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 25/159 (15%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LD+GTG+G + +A  K        GVDI  + + +A+ NA  NG+          
Sbjct: 125 NGKNVLDVGTGSGVLAMAAAKLGADL-AYGVDIDPQTIPVARENAAQNGL---------- 173

Query: 157 WFSSVEGLFD-VIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVS 214
             S+ +  FD   ++   +        L  +   +D  ++ L         +  +A    
Sbjct: 174 --SAPQAQFDEGTLAQGSFTAPAGHAALAEQ--GYDVLVANLFA-----ELHDLLAATYL 224

Query: 215 RHLNKDGLCSVEIG--YNQKVDVVRIFESRKLFLVNAFK 251
            HL   G   +  G   ++   V+   E   +  V   +
Sbjct: 225 DHLRPGGALLL-TGILEDRLGLVLAALEREGVRGVEVRQ 262


>gi|317493673|ref|ZP_07952094.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918616|gb|EFV39954.1| methyltransferase small domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 388

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 24/146 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D    F L  + K     I DLG G G + L  L+ +P    +  D S  A+  A+ N  
Sbjct: 224 DIGARFFLEHLPKDIEGSIADLGCGNGVIGLKALELNPNADMLFCDESYMAVASAQMNVE 283

Query: 143 TNGVS--ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            N     +R      + FS V+ G  + ++ NPP+ +   +            +++ D  
Sbjct: 284 VNRPEDMDRCAFRVGNGFSGVDGGSLNAVLCNPPFHQQHSITD----------QVAWD-- 331

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                    +  G  R L   G   +
Sbjct: 332 ---------MFVGAKRCLKIHGTLYI 348


>gi|297271586|ref|XP_001117412.2| PREDICTED: putative methyltransferase METT10D-like [Macaca mulatta]
          Length = 654

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|326779224|ref|ZP_08238489.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
 gi|326659557|gb|EGE44403.1| Methyltransferase type 12 [Streptomyces cf. griseus XylebKG-1]
          Length = 302

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 24/142 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL   +  +   DV  ++DLG+GTG    ALL+  P  +   VD S + LE   S A  
Sbjct: 55  TALTGRIACLAGDDVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARD 114

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+ +R  TL++D  + + G+ D           ++     L   D DP  +L G     
Sbjct: 115 RGLGDRVRTLEADAGAGLPGVAD---------ADLVWASASLHHLD-DPATALAG----- 159

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                    +   L   GL +V
Sbjct: 160 ---------IRAALRPGGLLAV 172


>gi|292490451|ref|YP_003525890.1| cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
           halophilus Nc4]
 gi|291579046|gb|ADE13503.1| Cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
           halophilus Nc4]
          Length = 380

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 48/144 (33%), Gaps = 26/144 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL  +  R +  D +RIL+LG G GA+ L +    P      V  S       +  A  
Sbjct: 139 AALTITCERAQLEDGLRILELGCGWGALSLWMAALYPRSTITAVSNSHSQSHYIRQRAEQ 198

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+S            S +  FD IVS                V  F+           +
Sbjct: 199 FGLSNLEIITADMNDFSTQERFDRIVS----------------VEMFEH----------M 232

Query: 204 SHYRTIADGVSRHLNKDGLCSVEI 227
            +YR +   +   L   G   + I
Sbjct: 233 RNYRWLLARIHHWLKPSGKFFMHI 256


>gi|282859295|ref|ZP_06268408.1| ribosomal protein L11 methyltransferase [Prevotella bivia
           JCVIHMP010]
 gi|282587920|gb|EFB93112.1| ribosomal protein L11 methyltransferase [Prevotella bivia
           JCVIHMP010]
          Length = 289

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--W 157
           R+LD G GTG + +   K     + +  DI   +++ A  NA  N VS   D L+ D   
Sbjct: 154 RVLDCGCGTGILSIVSAKLGAK-EVISYDIDEWSVKNAMHNAAINAVS--IDVLEGDKKV 210

Query: 158 FSSVEGLFDVIVSN 171
            S V G+FD++++N
Sbjct: 211 LSHVCGVFDIVLAN 224


>gi|228922867|ref|ZP_04086165.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836922|gb|EEM82265.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 242

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETAPIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|254169251|ref|ZP_04876084.1| tRNA methyltransferase complex GCD14 subunit superfamily
           [Aciduliprofundum boonei T469]
 gi|197621788|gb|EDY34370.1| tRNA methyltransferase complex GCD14 subunit superfamily
           [Aciduliprofundum boonei T469]
          Length = 237

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 68/197 (34%), Gaps = 34/197 (17%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           LG R+ Y +R  L       + + +++     A+ + R   R   R+++ G G+GA+ +A
Sbjct: 37  LGTREVYVLRSNLYDYISTLKRKAQIIALKDAAYIIARCGIRSGWRVVEGGAGSGAMSIA 96

Query: 115 LLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNP 172
           LL    P  K    ++      IAK N    G+   +   + D    VE    D  + + 
Sbjct: 97  LLYYTYPDGKVYTYELRDDFAAIAKKNVENAGLQAHWILKKGDIRKDVEERDVDGFILDI 156

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG-YNQ 231
           P                 +P  +               D   + L + G     I  YNQ
Sbjct: 157 P-----------------EPWEA--------------VDMAKKALRQSGCIMAYIPTYNQ 185

Query: 232 KVDVVRIFESRKLFLVN 248
              V R  +S     + 
Sbjct: 186 LERVYRKMKSVGFVDLE 202


>gi|167044449|gb|ABZ09125.1| putative RNA methylase family UPF0020 [uncultured marine
           crenarchaeote HF4000_APKG6D9]
          Length = 196

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNA 141
           +      + +   +    + D+G G+G++ + A L+     K + +D   KA+E+ K NA
Sbjct: 25  EEVRTIQISKARLKQGQTVYDIGCGSGSISVEAALQVESSGKILAIDFDEKAIELTKKNA 84

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
               +S                    I  N       I++    +V          GG  
Sbjct: 85  EKFQISN----------------ITTIFGNAK---EKILELEQADVI-------FIGGTG 118

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIG---YNQKVDVVRIFESRKLFLVNA 249
           G    + I +     L   G     IG         V++I E  +   V+ 
Sbjct: 119 G--DTQKIVELSQEKLKSGGRIV--IGTILIETLSAVLQILEKLQFKDVDI 165


>gi|218246859|ref|YP_002372230.1| type 12 methyltransferase [Cyanothece sp. PCC 8801]
 gi|218167337|gb|ACK66074.1| Methyltransferase type 12 [Cyanothece sp. PCC 8801]
          Length = 441

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS 159
           ILD+  G+G   L+L + +P  K +G+DIS  +LE+A++    +G    +F  +  +  S
Sbjct: 62  ILDVACGSGYTTLSLAEANPGAKIIGIDISQASLEMAEARLKYHGHDQVKFHLMSLEDVS 121

Query: 160 SVEGLFDVI 168
            +   FD I
Sbjct: 122 QLNLKFDYI 130


>gi|167625805|ref|YP_001676099.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis
           HAW-EB4]
 gi|189037703|sp|B0TJ37|PRMA_SHEHH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|167355827|gb|ABZ78440.1| ribosomal protein L11 methyltransferase [Shewanella halifaxensis
           HAW-EB4]
          Length = 293

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     +  G+DI  +A+E +K+NA  NGV ++ +    +    
Sbjct: 162 VIDFGCGSGILAVAALKLGAE-RVTGIDIDYQAIEASKANAERNGVQDKLELYLPE-DQP 219

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLE 186
            + L D++V+N        +  L  E
Sbjct: 220 ADLLADILVANILAGPLRELAPLIAE 245


>gi|156378558|ref|XP_001631209.1| predicted protein [Nematostella vectensis]
 gi|156218245|gb|EDO39146.1| predicted protein [Nematostella vectensis]
          Length = 407

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 59/159 (37%), Gaps = 25/159 (15%)

Query: 29  VLDDRQRFFLTNAIVRSLKHESIHRILGW---------------RDFYNVRLTLSSDTFE 73
           VL    + +    +  S  +  +  +                   D+ ++++ L     +
Sbjct: 27  VLSKETKDWWWVELEGSCGYIPVSYVTSEEVHRRNLAWQDDEYFADYGSLKIHLEMLKDK 86

Query: 74  PRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           PR E+  + ++    +   ++       +LD+G GTG + L   +E    K   V+ S  
Sbjct: 87  PRTESYRMAIEQGAGYFKDKV-------VLDVGCGTGILSLFCAREGKASKVYAVEASEI 139

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVS 170
           A ++ +     N + ++   +Q       +    D+IVS
Sbjct: 140 A-KLTEEIIKQNNLDDKITVIQGKIEEVELPEKVDIIVS 177


>gi|149201109|ref|ZP_01878084.1| methyltransferase small [Roseovarius sp. TM1035]
 gi|149145442|gb|EDM33468.1| methyltransferase small [Roseovarius sp. TM1035]
          Length = 330

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 47/145 (32%), Gaps = 26/145 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD A       + +     ++DLG G G +    L+ +   +   V+    AL  A+ N 
Sbjct: 170 VDPASRLLADSLPQALGAHVVDLGAGWGYLSARALERAGIARLDLVEADHAALACARQNV 229

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
                  +F    +  +   +   D ++ NPP+                + R +     D
Sbjct: 230 TD--ARAQFHWADATVWKP-DARADSVIMNPPF---------------HESRSA---DPD 268

Query: 202 -GLSHYRTIADGVSRHLNKDGLCSV 225
            G +  R      +  L   G   +
Sbjct: 269 LGRAFIRA----AAGMLKPSGSLWM 289


>gi|161523907|ref|YP_001578919.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|189351332|ref|YP_001946960.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|160341336|gb|ABX14422.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|189335354|dbj|BAG44424.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
          Length = 406

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I      R+LD+G G GA+ L   ++    + VGV +S    ++A       G
Sbjct: 158 IDHILTKIRLEPGQRLLDIGCGWGALVLRAAQKF-GAQCVGVTLSQNQFDLATERVKAAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R +    D +  +EG FD I S
Sbjct: 217 LEDRIEIRLQD-YREIEGQFDRITS 240


>gi|67967559|dbj|BAE00262.1| unnamed protein product [Macaca fascicularis]
          Length = 607

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|163848171|ref|YP_001636215.1| cyclopropane fatty acyl phospholipid synthase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222526076|ref|YP_002570547.1| cyclopropane fatty acyl phospholipid synthase [Chloroflexus sp.
           Y-400-fl]
 gi|163669460|gb|ABY35826.1| Cyclopropane-fatty-acyl-phospholipid synthase [Chloroflexus
           aurantiacus J-10-fl]
 gi|222449955|gb|ACM54221.1| Cyclopropane-fatty-acyl-phospholipid synthase [Chloroflexus sp.
           Y-400-fl]
          Length = 394

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ L     +++ +  +R+LD+G G G     L  E      VG+ +S +   +A     
Sbjct: 164 EAKLDLIARKLDLQPGLRVLDIGCGWGGTAQYLA-ERYGVHVVGITVSKEQAALASERCR 222

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              V  R +      +    G FD I+S                V  F+          G
Sbjct: 223 GLPVEIRLED-----YRQTRGTFDRIIS----------------VGMFE--------HVG 253

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
             +YRT      R L  DGL  +
Sbjct: 254 YRNYRTFMQVARRCLADDGLLLL 276


>gi|332210380|ref|XP_003254285.1| PREDICTED: methyltransferase-like protein 5-like [Nomascus
           leucogenys]
          Length = 209

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   NA  
Sbjct: 38  CMLYTIHNTYDDIENKVVADLGCGCGVLNIGTAMLGAGLCV-GFDIDEDALEIFNRNAEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q D     + +   FD ++ NPP+
Sbjct: 97  FELT-NIDMVQCDVCLLSNRMSKSFDTVIMNPPF 129


>gi|325690094|gb|EGD32098.1| O-methyltransferase [Streptococcus sanguinis SK115]
          Length = 227

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFEE 185


>gi|324510450|gb|ADY44369.1| tRNA-dihydrouridine synthase-like protein [Ascaris suum]
          Length = 560

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG G G + L           +GVD+    L + + N     +S+  + +Q D    
Sbjct: 56  VADLGCGCGILALG-AAHLGASYCLGVDVDEDVLAVCQRNVDHCELSDVVELVQMDVTHR 114

Query: 161 ---VEGLFDVIVSNPPY 174
              +  LFD ++ NPP+
Sbjct: 115 TAVLRPLFDTVLMNPPF 131


>gi|321314402|ref|YP_004206689.1| putative RNA methyltransferase [Bacillus subtilis BSn5]
 gi|320020676|gb|ADV95662.1| putative RNA methyltransferase [Bacillus subtilis BSn5]
          Length = 461

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 19/132 (14%)

Query: 54  ILGWRDFYNV----RLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I G    Y++    +  +S+ +F      +T++L D AL ++    E +    ++D   G
Sbjct: 266 IWGEEYIYDLIGDVKFAISARSFYQVNPEQTKVLYDKALEYA----ELQGEETVIDAYCG 321

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSV 161
            G + L L K++   K  GV+I  +A+E AK NA  NG++         +T+   W+   
Sbjct: 322 IGTISLFLAKQAK--KVYGVEIVPEAIEDAKRNAELNGITNAEFAVGEAETVIPKWYEE- 378

Query: 162 EGLFDVIVSNPP 173
               D +V +PP
Sbjct: 379 GIAADTLVVDPP 390


>gi|317178738|dbj|BAJ56526.1| Type II modification enzyme [Helicobacter pylori F30]
          Length = 386

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K++   +L+   G G    + LK    
Sbjct: 7   NLDIKTLGQVFTPKK----IVDFMLTL------KQNQGSVLEPSAGDG----SFLKRLKK 52

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 53  A--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 96

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 97  APSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|298736138|ref|YP_003728663.1| adenine-specific DNA-methyltransferase [Helicobacter pylori B8]
 gi|298355327|emb|CBI66199.1| adenine-specific DNA-methyltransferase [Helicobacter pylori B8]
          Length = 379

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K++   +L+   G G    + LK    
Sbjct: 3   NLDIKTLGQVFTPKK----IVDFMLTL------KQNQGSVLEPSAGDG----SFLKRLKK 48

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I     +I   NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 49  A--VGIEIDP---KICSKNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 92

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 93  APSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 136


>gi|297616264|ref|YP_003701423.1| methyltransferase small [Syntrophothermus lipocalidus DSM 12680]
 gi|297144101|gb|ADI00858.1| methyltransferase small [Syntrophothermus lipocalidus DSM 12680]
          Length = 246

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+ L  +   + +    ++ +LG G+G + + L++         +++     + A    
Sbjct: 30  VDAVLLAAFATLGRGS--QVCELGAGSGVISVLLVQRDKSCSIKALEVQDSLWDRAVRTV 87

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY--IESVIVDCLGLEV--RDFDPR 193
             NG+ +  + ++ D     E    G FD++V+NPP+  I   ++     EV     +  
Sbjct: 88  KLNGLEDNIEVIKGDIRRVREIFPAGGFDLVVANPPFWRIGEGLLPE-DPEVAAACHEVV 146

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           ++L            +    +  L   G  ++
Sbjct: 147 VTL----------EEVIGAAAYLLRLGGKLAL 168


>gi|312198563|ref|YP_004018624.1| methyltransferase type 11 [Frankia sp. EuI1c]
 gi|311229899|gb|ADP82754.1| Methyltransferase type 11 [Frankia sp. EuI1c]
          Length = 531

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 11/108 (10%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL-KESPFF 122
           RL   S   EP  E            L  +  R   R LD+G G G V + L  +  P  
Sbjct: 269 RLAAQSRVLEPGTEAF----------LTSLGVRPGWRCLDVGCGHGQVSILLAGRVRPGG 318

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + VG+D S  +L +A+ NA   G    +    + W     G FD+  S
Sbjct: 319 QVVGIDASPASLAVARHNATRVGARIAWMNADASWLPVARGGFDLAYS 366


>gi|258650473|ref|YP_003199629.1| cyclopropane-fatty-acyl-phospholipid synthase [Nakamurella
           multipartita DSM 44233]
 gi|258553698|gb|ACV76640.1| Cyclopropane-fatty-acyl-phospholipid synthase [Nakamurella
           multipartita DSM 44233]
          Length = 442

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 4/114 (3%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +  LT SS  FEP  + +      +   L     R  +R+L++G+G GA+ +   +  
Sbjct: 184 FLDPSLTYSSAWFEPGDDLDTAQVRKIDAILDLARMRPGMRVLEIGSGWGALAMRAARTR 243

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVS 170
                  + +S    E+A       G+S+R D L  D+    +   G +D +VS
Sbjct: 244 -DVHVTTLTLSEAQRELALRRIADAGLSQRIDVLLEDYRVHAAREAGSYDAVVS 296


>gi|238916542|ref|YP_002930059.1| putative SAM-dependent methyltransferase [Eubacterium eligens ATCC
           27750]
 gi|238871902|gb|ACR71612.1| putative SAM-dependent methyltransferase [Eubacterium eligens ATCC
           27750]
          Length = 420

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 24/131 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD  T  G   L         +  G+DIS  A+E A++NA  NG+ +      ++   
Sbjct: 245 RVLDCFTHMGTFALNAGIAGAK-EVTGLDISEYAVEQARANAKLNGLEDTVHFKCANVLD 303

Query: 160 SVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +         +DV++ +PP                   + ++ G       YR I    
Sbjct: 304 ELPKLNEAGEKYDVVILDPPAFTKSREAT----------KNAIKG-------YREINMKG 346

Query: 214 SRHLNKDGLCS 224
            + +   G  +
Sbjct: 347 LKLVKDGGYLA 357


>gi|328945499|gb|EGG39650.1| O-methyltransferase [Streptococcus sanguinis SK1087]
          Length = 227

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D +     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDFV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFED 185


>gi|294010470|ref|YP_003543930.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium
           japonicum UT26S]
 gi|292673800|dbj|BAI95318.1| ubiquinone/menaquinone biosynthesis methyltransferase [Sphingobium
           japonicum UT26S]
          Length = 224

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER 149
           L  +  R    I+D+G GTG+  L L ++ P  + +G+D   +AL+IA+  A    +   
Sbjct: 34  LAALAPRGGETIVDIGCGTGSFALLLKRDEPSARVIGLDPDAEALDIARRKAAA--MVAD 91

Query: 150 FDTLQSDWFSSVEGLFDVIVS 170
            D  Q       E   D +VS
Sbjct: 92  VDWRQGFATDLPEQSADAVVS 112


>gi|284929759|ref|YP_003422281.1| 23S rRNA m(5)U-1939 methyltransferase [cyanobacterium UCYN-A]
 gi|284810203|gb|ADB95900.1| 23S rRNA m(5)U-1939 methyltransferase [cyanobacterium UCYN-A]
          Length = 448

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F+N+   L  DTF          ++ L   L  +      +I+D   G G   L L K  
Sbjct: 271 FFNIDFKLRPDTFFQVNAQS--AETLLHSLLDNLILTGKEKIVDAYCGIGTFTLPLAKRI 328

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSVEGLFDVIVSNPP 173
                +G++IS  ++E AK+NA  N +    +  Q    D   ++    D+++ +PP
Sbjct: 329 SHA--IGIEISHDSIEQAKANAELNNI-NNVEFYQGAVKDILPTLNIFPDIVLLDPP 382


>gi|302142307|emb|CBI19510.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     +     I+D  TG G   +   + S     + +DI  K +E A+ NA   GV +
Sbjct: 506 ARHHASRCGSGIIVDCFTGVGGNAIQFAQRSK--HVIAIDIDPKKIEYAQHNAAIYGVDD 563

Query: 149 RFDTLQSDWF-SSVEGLFDVIVSNPPY 174
           R D ++ D F  +     D +  +PP+
Sbjct: 564 RIDFIKGDSFLLASTLKADTVFLSPPW 590


>gi|260435936|ref|ZP_05789906.1| methyltransferase, UbiE/COQ5 family [Synechococcus sp. WH 8109]
 gi|260413810|gb|EEX07106.1| methyltransferase, UbiE/COQ5 family [Synechococcus sp. WH 8109]
          Length = 210

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 55/178 (30%), Gaps = 39/178 (21%)

Query: 49  ESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             +     +R  Y++   +SS +         L   AL   L     +    +LDL  G+
Sbjct: 6   RPLAY--RYRWIYDMVTAVSSLSVGGVERLRGLGLEALQPHL-----KPGAAVLDLCCGS 58

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           G      L         G+D+S +AL++A   A  N   ER + L  D            
Sbjct: 59  GEAAAPWLAAGYA--VTGLDVSPRALDLA---AQRNPSLERVEGLAED------------ 101

Query: 169 VSNPPYIESVIVDCLGLEVRDFD-PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
              PP +       + L V   + PR               +     R L   G   +
Sbjct: 102 ---PP-LADASFSAIQLSVALHEFPRS----------DREQVLRSALRLLEPGGWLVL 145


>gi|225458633|ref|XP_002282801.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 780

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +     +     I+D  TG G   +   + S     + +DI  K +E A+ NA   GV +
Sbjct: 603 ARHHASRCGSGIIVDCFTGVGGNAIQFAQRSK--HVIAIDIDPKKIEYAQHNAAIYGVDD 660

Query: 149 RFDTLQSDWF-SSVEGLFDVIVSNPPY 174
           R D ++ D F  +     D +  +PP+
Sbjct: 661 RIDFIKGDSFLLASTLKADTVFLSPPW 687


>gi|78484787|ref|YP_390712.1| ribosomal protein L11 methyltransferase [Thiomicrospira crunogena
           XCL-2]
 gi|123555927|sp|Q31II5|PRMA_THICR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|78363073|gb|ABB41038.1| LSU ribosomal protein L11P methyltransferase [Thiomicrospira
           crunogena XCL-2]
          Length = 294

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 33/161 (20%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL  +         + ++D G G+G + LA  ++       G DI  +A+  ++ NA  
Sbjct: 145 TALCLTWLDQNPPTDLTVIDYGCGSGVLALA-AEKLGAKHVKGTDIDPQAIIASQQNADR 203

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           N  +  F  ++      V+ L   I++ P       +  L  E                 
Sbjct: 204 NNANIEFKLVKEFQSEPVDLLIANILAGP-------LKALAPE----------------- 239

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
              R +    +  L+  GL       NQ  D++  ++ +  
Sbjct: 240 -FIRLMKPNATLILS--GLL-----TNQAADLIAFYQQQGF 272


>gi|254230171|ref|ZP_04923565.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
 gi|262394632|ref|YP_003286486.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
 gi|151937309|gb|EDN56173.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
 gi|262338226|gb|ACY52021.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. Ex25]
          Length = 418

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 26/140 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++  +   R++++GTG GA+ + +  E          IS +    A+       
Sbjct: 190 MDRLCQQLNLQPSDRVIEIGTGWGAMAIYMA-EQYGCHVTTTTISEEQHAYAEQKIRERN 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  +   L+ D +  + G +D +VS         ++ +    + F P             
Sbjct: 249 LGGKITLLKQD-YRDLSGHYDKLVS---------IEMIEAVGKQFLPSY----------- 287

Query: 206 YRTIADGVSRHLNKDGLCSV 225
                      L   GL ++
Sbjct: 288 ----IKQCKSLLKPGGLMAI 303


>gi|317050822|ref|YP_004111938.1| methyltransferase [Desulfurispirillum indicum S5]
 gi|316945906|gb|ADU65382.1| methyltransferase [Desulfurispirillum indicum S5]
          Length = 182

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 29/137 (21%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           +     R LDL  G+GAV L           V V+ S  AL   + N     + E+    
Sbjct: 38  QNLQGKRFLDLFGGSGAVGLEAASR--GASVVIVEKSPLALRCVEQNIQHCRLQEQVTVQ 95

Query: 154 QSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
           + D  + +      FDVI  +PP+ ++     +  +V +                     
Sbjct: 96  RGDALAYLARSPQSFDVIFVDPPFDQTHYYGEVMEKVAN--------------------- 134

Query: 211 DGVSRHLNKDGLCSVEI 227
              S  L  DGL  +E 
Sbjct: 135 ---SSVLATDGLLVLEH 148


>gi|225076548|ref|ZP_03719747.1| hypothetical protein NEIFLAOT_01596 [Neisseria flavescens
           NRL30031/H210]
 gi|224952119|gb|EEG33328.1| hypothetical protein NEIFLAOT_01596 [Neisseria flavescens
           NRL30031/H210]
          Length = 441

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%)

Query: 72  FEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++P   T++   L +  +A ++  +  +   RI DL  G G   L L K       VG++
Sbjct: 266 YKPGDFTQINAQLNEVMVARAVRLLNPQKGERIADLFCGLGNFSLPLAKS--GASVVGIE 323

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
            +   ++ A+ NA  N  +E      +D F + E      G FD ++ +PP
Sbjct: 324 GADYLVDRARENARLNRCAENITFSVADLFDTDEKIVESWGQFDKMLLDPP 374


>gi|254476065|ref|ZP_05089451.1| conserved hypothetical protein [Ruegeria sp. R11]
 gi|214030308|gb|EEB71143.1| conserved hypothetical protein [Ruegeria sp. R11]
          Length = 414

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 56/178 (31%), Gaps = 31/178 (17%)

Query: 3   ALRDSHSF--LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDF 60
           A  D+     L + T L    +               L  A+    +H     IL  R +
Sbjct: 22  AAVDADHLVALAKATALGDGGLQT----------ARLLNEALALDPQHHEAQ-ILRERLY 70

Query: 61  YNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
                     TF PR    +L D A      +    + R    +LD+G G G +   L  
Sbjct: 71  ---------QTFVPRWHFPMLADQARNQAYAAAIAAKVRPGDIVLDIGCGAG-LTAMLAA 120

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT-----LQSDWFSSVEGLFDVIVS 170
            +        +      E A+     NG+++R         +    S +    DV++S
Sbjct: 121 RAGAQHVYTCEQQPLIAEAARQVIARNGLADRITVISKWSHEIVIGSDMPEPADVVIS 178


>gi|327458682|gb|EGF05030.1| O-methyltransferase [Streptococcus sanguinis SK1057]
          Length = 227

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPKAQITTIDRNPEMVELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLDTLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|313669084|ref|YP_004049368.1| ribosomal protein L11 methyltransferase [Neisseria lactamica
           ST-640]
 gi|313006546|emb|CBN88010.1| putative ribosomal protein L11 methyltransferase [Neisseria
           lactamica 020-06]
          Length = 295

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|301155533|emb|CBW15001.1| methylase for 50S ribosomal subunit protein L11 [Haemophilus
           parainfluenzae T3T1]
          Length = 295

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A LK       +G+DI  +A+  +++NA  N V++R     SD 
Sbjct: 159 GKTVIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASRNNAEQNEVADRLQLFLSD- 216

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 217 DKPADLKADVVVAN 230


>gi|212633321|ref|YP_002309846.1| ribosomal protein L11 methyltransferase [Shewanella piezotolerans
           WP3]
 gi|226710113|sp|B8CHY3|PRMA_SHEPW RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|212554805|gb|ACJ27259.1| Ribosomal protein L11 methyltransferase [Shewanella piezotolerans
           WP3]
          Length = 293

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     K  GVDI  +A+E +K+NA  NGV ++      +    
Sbjct: 162 VIDFGCGSGILAVAALKLGAE-KVTGVDIDYQAIEASKANAERNGVEDQLALYLPE--DQ 218

Query: 161 VEGLF-DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            EGL  D++V+N        +  L  E      +++L G
Sbjct: 219 PEGLIADILVANILAGPLRELAPLIAEKVKPGGQLALSG 257


>gi|158522466|ref|YP_001530336.1| ribosomal protein L11 methyltransferase [Desulfococcus oleovorans
           Hxd3]
 gi|226710072|sp|A8ZW25|PRMA_DESOH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|158511292|gb|ABW68259.1| ribosomal protein L11 methyltransferase [Desulfococcus oleovorans
           Hxd3]
          Length = 302

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 51/207 (24%)

Query: 62  NVRLTLSSDTFEPRPETELLV-------------DSALAFSLPRIEKR--DVVRILDLGT 106
              + +     +  PE   +V                 A  L  +EK        LD+GT
Sbjct: 111 GRNIVVRPTWRDHVPEPGEVVIDLDPGMAFGTGTHPTTAMCLEMVEKHLAPGTAFLDVGT 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV---SERFDTLQSDWFSSVEG 163
           G+G + +A  ++       GVD    A++IA  N   NG+         +++D  + V+ 
Sbjct: 171 GSGILMIA-AQKLGAKTVWGVDNDGVAVKIAAENLERNGIFAGGNACRIMRADLVTGVDR 229

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
            FD++ +N           L                         +AD V R +   GL 
Sbjct: 230 AFDLVTAN----------ILS-------------------EVIVALADDVGRVVVPGGLL 260

Query: 224 SV--EIGYNQKVDVVRIFESRKLFLVN 248
                I   Q   V     +    ++ 
Sbjct: 261 VCSGIIEPKQA-MVEAKLTACGFDIIE 286


>gi|120609553|ref|YP_969231.1| ribosomal protein L11 methyltransferase [Acidovorax citrulli
           AAC00-1]
 gi|120588017|gb|ABM31457.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Acidovorax
           citrulli AAC00-1]
          Length = 293

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G G+G + +   K         VDI   A+E  + NA  NGV+     L++    
Sbjct: 166 RVLDYGCGSGILAIGAAK-FGATDIDAVDIDPAAVESTRLNAEANGVA-----LKAGLPE 219

Query: 160 SVEGLFDVIVSN 171
           + +G +  +++N
Sbjct: 220 AAQGRYGTVLAN 231


>gi|78062726|ref|YP_372634.1| methylase involved in ubiquinone/menaquinone biosynthesis-like
           [Burkholderia sp. 383]
 gi|77970611|gb|ABB11990.1| Methylase involved in ubiquinone/menaquinone biosynthesis-like
           protein [Burkholderia sp. 383]
          Length = 282

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)

Query: 74  PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCK 132
             P  +LLVD+A               +LD+G GTGAV LA+ +      +  G+DIS +
Sbjct: 33  FEPLEKLLVDAA--------APSSARSVLDVGCGTGAVTLAIARRLGADVQCTGIDISAR 84

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            ++ A++ A  + V  RF        +      D+IVS
Sbjct: 85  MIDAAQARAERSSVPVRFVCADVQTHAFEPASVDLIVS 122


>gi|332529331|ref|ZP_08405293.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
 gi|332041248|gb|EGI77612.1| Cyclopropane-fatty-acyl-phospholipid synthase [Hylemonella gracilis
           ATCC 19624]
          Length = 422

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      ++      +L++GTG G + +   +     +     IS +  E+A+      G
Sbjct: 191 LHRVCQHLKLGPDDHLLEIGTGWGGMAIHAAQHY-GCRVTTTTISRQQYELAQERVAAAG 249

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R   L  D +  + G +D +VS
Sbjct: 250 LQDRITLLLED-YRDLTGQYDKLVS 273


>gi|304388400|ref|ZP_07370509.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ATCC 13091]
 gi|304337612|gb|EFM03772.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ATCC 13091]
          Length = 295

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|288561023|ref|YP_003424509.1| Met-10+ like-protein [Methanobrevibacter ruminantium M1]
 gi|288543733|gb|ADC47617.1| Met-10+ like-protein [Methanobrevibacter ruminantium M1]
          Length = 365

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 49/198 (24%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           ++L + +  F PR         A      + E +D   ILD+  G G   + + +E    
Sbjct: 182 LKLDVKNVYFSPR--------LATERKRVQEETKDGEEILDMFAGIGPFPIVIARE-KNV 232

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGL-FDVIVSNPPYI 175
               VDI+  A++    N   N +                  + ++G  FD I+ N P  
Sbjct: 233 DITAVDINEYAIKYLNENIKLNKLQPNAHITAICGDTRIVADNELKGRKFDRIIMNLP-- 290

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEI--GYNQK 232
                                     GL+      D         G+    E   G++Q 
Sbjct: 291 --------------------------GLAP--DFLDLAVSMCKDGGVIHYYEFSEGFSQG 322

Query: 233 VDVVRIFESRKLFLVNAF 250
           ++  +I   ++   V   
Sbjct: 323 IERAQIACEKQNKEVEIL 340


>gi|269797777|ref|YP_003311677.1| RNA methyltransferase, TrmA family [Veillonella parvula DSM 2008]
 gi|269094406|gb|ACZ24397.1| RNA methyltransferase, TrmA family [Veillonella parvula DSM 2008]
          Length = 457

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 17/140 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D ALA++    + +    ++D   GTG + L L  ++
Sbjct: 273 DLRFTLSPHSFFQVNPEQTTVLYDQALAYA----DLKGTEIVIDAYCGTGTISLFLAYKA 328

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 329 K--HVIGIEIVEPAITNARENARRNGY-DNTEFIVADAAVEIPKLYKAGVRPDVIVFDP- 384

Query: 174 YIESVIVDCLGLEVRDFDPR 193
            I +   + +       +P+
Sbjct: 385 -IRAGCKEEVLTSAASMEPK 403


>gi|218699235|ref|YP_002406864.1| 23S rRNA methyluridine methyltransferase [Escherichia coli IAI39]
 gi|226725403|sp|B7NPF5|RUMB_ECO7I RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|218369221|emb|CAR16976.1| 23S rRNA m(5)U747 methyltransferase [Escherichia coli IAI39]
          Length = 375

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  +  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPIKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F+S +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFASAQGEVPELVLVNPP 309


>gi|190149557|ref|YP_001968082.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|307262877|ref|ZP_07544501.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|226725530|sp|B3H0C8|UBIG_ACTP7 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189914688|gb|ACE60940.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871782|gb|EFN03502.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 234

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ K        G+D++ + L++
Sbjct: 28  PIHLLNPLRLDYIQQKANGLFGKKVLDVGCGGGILSEAMAKA--GANVTGIDMTTEPLDV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  +G++        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|182438576|ref|YP_001826295.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467092|dbj|BAG21612.1| putative methyltransferase [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 294

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 24/142 (16%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +AL   +  +   DV  ++DLG+GTG    ALL+  P  +   VD S + LE   S A  
Sbjct: 47  TALTGRIACLAGDDVRSVVDLGSGTGTGTFALLERFPTARVTAVDSSPEMLERLASAARD 106

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
            G+ +R  TL++D  + + G+ D           ++     L   D DP  +L G     
Sbjct: 107 RGLGDRVRTLEADAGAGLPGVAD---------ADLVWASASLHHLD-DPATALAG----- 151

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
                    +   L   GL +V
Sbjct: 152 ---------IRAALRPGGLLAV 164


>gi|163793333|ref|ZP_02187308.1| Cyclopropane-fatty-acyl-phospholipid synthase [alpha
           proteobacterium BAL199]
 gi|159181135|gb|EDP65650.1| Cyclopropane-fatty-acyl-phospholipid synthase [alpha
           proteobacterium BAL199]
          Length = 419

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ R   R+L++G G G   +   ++    +  G+ +S +    A   A   GV +R   
Sbjct: 199 LQLRPGQRVLEIGCGWGGFAVYAAQQF-DVEVHGITLSNEQHAYAVERARRAGVDDRVSF 257

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG----------IDG 202
              D +  V+G FD IVS   +             +  D  +  DGG            G
Sbjct: 258 EIRD-YRDVDGRFDAIVSIEMFEAVGKSFWTRFFAQLHDRLV--DGGRAALQVITISEAG 314

Query: 203 LSHYRTIADGVSRHLNKDGLC-----SVEIGYNQKVDV 235
              YR   D + R++   G+        E+G  Q + V
Sbjct: 315 FEDYRASPDFIQRYIFPGGMLPTRRHLHELGQAQGMRV 352


>gi|122114654|ref|NP_076991.3| methyltransferase-like protein 16 [Homo sapiens]
 gi|269849619|sp|Q86W50|MET16_HUMAN RecName: Full=Methyltransferase-like protein 16; AltName:
           Full=Methyltransferase 10 domain-containing protein
 gi|119610943|gb|EAW90537.1| methyltransferase 10 domain containing, isoform CRA_a [Homo
           sapiens]
 gi|119610944|gb|EAW90538.1| methyltransferase 10 domain containing, isoform CRA_a [Homo
           sapiens]
 gi|307686401|dbj|BAJ21131.1| methyltransferase 10 domain containing [synthetic construct]
          Length = 562

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|20808214|ref|NP_623385.1| SAM-dependent methyltransferase related to tRNA
           (uracil-5-)-methyltransferase [Thermoanaerobacter
           tengcongensis MB4]
 gi|254479579|ref|ZP_05092891.1| 23S rRNA (uracil-5-)-methyltransferase [Carboxydibrachium pacificum
           DSM 12653]
 gi|50401615|sp|Q8R933|Y1797_THETN RecName: Full=Uncharacterized RNA methyltransferase TTE1797
 gi|20516809|gb|AAM24989.1| SAM-dependent methyltransferases related to tRNA
           (uracil-5-)-methyltransferase [Thermoanaerobacter
           tengcongensis MB4]
 gi|214034482|gb|EEB75244.1| 23S rRNA (uracil-5-)-methyltransferase [Carboxydibrachium pacificum
           DSM 12653]
          Length = 450

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNA 141
           +   +             I DL  GTG + + +    P  +  +G+++  +A+  AK NA
Sbjct: 292 ERIYSTVREFAGDVSNKTIFDLYCGTGTIGIVMA---PLARKVIGIELVEEAVFSAKENA 348

Query: 142 VTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             NG+      +  D       ++   D++V +PP   S +      ++ +F+P 
Sbjct: 349 ALNGLENAV-FIAGDVSKKLREIKEKPDIVVVDPP--RSGVNPKALEDIVNFEPE 400


>gi|14042068|dbj|BAB55094.1| unnamed protein product [Homo sapiens]
          Length = 504

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|325087466|gb|EGC40776.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 332

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 33/153 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              LV + +   L     ++  +++DL TG+G   +      P  + +G D+S       
Sbjct: 78  HHALVMTIMDDRLFLAPVKNPTKVIDLCTGSGIWAVEFADMFPECEVIGNDLSP-----T 132

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + + V   +    D +++DW    +  FD+I  +  Y+   I D                
Sbjct: 133 QPSLVPPNLQFIVDDVEADWLYE-DTPFDLI--HARYLAESIRDMP-------------- 175

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                      + +         G       ++
Sbjct: 176 ----------RLLEQAYNCTKPGGWVEF-HDWD 197


>gi|325273210|ref|ZP_08139494.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas sp.
           TJI-51]
 gi|324101654|gb|EGB99216.1| ribosomal RNA small subunit methyltransferase C [Pseudomonas sp.
           TJI-51]
          Length = 332

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D   A  L  ++      +LD G G G +   + +  P  +   +D+   A+  ++    
Sbjct: 177 DRGTALLLKHLDNLPSGHMLDFGCGAGVLGATVKRRYPHNRVTLLDVDAFAVAASRLTLA 236

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            NG+    + +  D   +      +I+SNPP+   V  +    E                
Sbjct: 237 ANGLEG--EVISGDGIDAAPLDLSLILSNPPFHTGVHTNYQASE---------------- 278

Query: 203 LSHYRTIADGVSRHLNKDG 221
                 +   ++ HL K G
Sbjct: 279 -----NLLRKLAVHLRKGG 292


>gi|307136012|gb|ADN33868.1| magnesium-protoporphyrin O-methyltransferase [Cucumis melo subsp.
           melo]
          Length = 316

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 26/165 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W+  Y     ++    + R      V++ +A        R V  + D G GTG++ + L 
Sbjct: 109 WKKIYGETDDVNRVQRDIRLGHSKTVENVMAMLKDEGPLRGVT-VCDAGCGTGSLSIPLA 167

Query: 117 KESPFFKGVGVDISCKALEIAKSNAV---TNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           KE    K    DIS   +  A++ A      GV  +F+        S+EG +D +V    
Sbjct: 168 KE--GAKVFASDISAAMVAEAENKAKEEVKGGVMPKFEVKD---LESLEGKYDTVVC--- 219

Query: 174 YIESVIVDCLGLEVRDFDPRISLDG---GIDGLSHYRTIADGVSR 215
                      L+V    P+   DG    +  L+  R I     +
Sbjct: 220 -----------LDVLIHYPQNKADGMIAHLASLAEKRLIISFAPK 253


>gi|293394274|ref|ZP_06638574.1| ribosomal RNA small subunit methyltransferase D [Serratia odorifera
           DSM 4582]
 gi|291423252|gb|EFE96481.1| ribosomal RNA small subunit methyltransferase D [Serratia odorifera
           DSM 4582]
          Length = 379

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE- 148
           L  +       I+DLG G G V L  L+++P  +   VD S  A+  ++ N   N   + 
Sbjct: 222 LENLPSDLSGEIIDLGCGNGVVGLTALRQNPDAQLTFVDESYMAVASSELNVKHNLPQDV 281

Query: 149 -RFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
            R   + ++  + +E G   V++ NPP+ +   +
Sbjct: 282 ERCQFIVNNSLAGMEGGSAQVVLCNPPFHQQHAI 315


>gi|240273562|gb|EER37082.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 332

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 33/153 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              LV + +   L     ++  +++DL TG+G   +      P  + +G D+S       
Sbjct: 78  HHALVMTIMDDRLFLAPVKNPTKVIDLCTGSGIWAVEFADMFPECEVIGNDLSP-----T 132

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + + V   +    D +++DW    +  FD+I  +  Y+   I D                
Sbjct: 133 QPSLVPPNLQFIVDDVEADWLYE-DTPFDLI--HARYLAESIRDMP-------------- 175

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                      + +         G       ++
Sbjct: 176 ----------RLLEQAYNCTKPGGWVEF-HDWD 197


>gi|297195650|ref|ZP_06913048.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719008|gb|EDY62916.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 245

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D ++   L    +    R+LDLG G G   L  L   P  KG GVD+S  AL  A+  A+
Sbjct: 22  DDSVRRLLDHGLRPGAERVLDLGCGGGEWLLRALAAQPALKGEGVDVSEDALSRAREAAI 81

Query: 143 TNGVSERFDTLQSDWFS-SVEGLFDVIVS 170
             GV ER    + D         FD+++S
Sbjct: 82  KRGVHERLTLHRHDAADFDSPHAFDLVIS 110


>gi|223937904|ref|ZP_03629804.1| Methyltransferase type 11 [bacterium Ellin514]
 gi|223893510|gb|EEF59971.1| Methyltransferase type 11 [bacterium Ellin514]
          Length = 389

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 54/221 (24%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC-LALLKESPFFKGVGVDISCKALEIA 137
           + +++       P    +    +LDLG+GTG +C +A     P  + +GVD++   LE+A
Sbjct: 44  KEVIEKDYGCGDPSKYLKPGETVLDLGSGTGKICFIAAQVVGPQGRVIGVDMTDDMLEVA 103

Query: 138 KSN----AVTNGVSE------RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           + N    A   G +       R   L  D       L    +S+     +       L V
Sbjct: 104 RRNAPVVAERLGYANVEFRKGRIQDLALDLELLDRELKQHPISDAASFLAADERAQDLRV 163

Query: 188 RDFDPRISLDGGIDGLSHY--------------RTIADGVSRHLNKDGLCSV-------- 225
           R   P ++     D +                 R + + + R L K G   +        
Sbjct: 164 RH--PLVA----TDSVDVVVSNCVLNLVEAKSKRQLFEEIFRVLKKGGRAVISDIVADEA 217

Query: 226 ---EI------------GYNQKVDVVRIFESRKLFLVNAFK 251
              E+            G   + + ++ F +   + V   K
Sbjct: 218 VPQELQNDPTLWSGCISGALTEAEFLKAFTNAGFYGVQILK 258


>gi|220922373|ref|YP_002497675.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium
           nodulans ORS 2060]
 gi|219946980|gb|ACL57372.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylobacterium
           nodulans ORS 2060]
          Length = 420

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 60/170 (35%), Gaps = 26/170 (15%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +  F +     S   FE   +       A +     ++      R+LD+G G G++ L L
Sbjct: 136 YALFLDRAWQYSCAYFETDADDLETAQRAKMRHIAAKLLAGPGQRVLDIGCGWGSLALYL 195

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYI 175
              +      G+ +S K L  A++ A   G+++R      D F   +G FD IVS     
Sbjct: 196 AAVAGCDDVRGITLSSKQLARARAQAEVQGLADRVRFALED-FRRTQGTFDRIVS----- 249

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      V  F+          G + Y          L +DG+  +
Sbjct: 250 -----------VGMFE--------HVGRADYARFFRIARERLAEDGVMLL 280


>gi|110835389|ref|YP_694248.1| hypothetical protein ABO_2528 [Alcanivorax borkumensis SK2]
 gi|110648500|emb|CAL17976.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 401

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 48/134 (35%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              R+LD+ +  G   +             VD S  A +    NA  NGV++   ++Q D
Sbjct: 223 KGARVLDVFSYCGGWGVQAALAGAES-VTCVDGSEIATDYVHRNAQLNGVADTVGSIQGD 281

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F++++        +D++V +PP       D                   +GL+ Y  I 
Sbjct: 282 AFAAMKQLIADGEKYDLVVLDPPAFIKRKKDF-----------------KNGLAGYHAIN 324

Query: 211 DGVSRHLNKDGLCS 224
           +   R +   G   
Sbjct: 325 ELAMRLVKPGGYLV 338


>gi|328773183|gb|EGF83220.1| hypothetical protein BATDEDRAFT_21725 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 304

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           ++D   G G   +         K + +DI    LE A+ NA   GV ++ + +  D+   
Sbjct: 142 MVDGFCGVGGNAIQFAMTCD--KVIAIDIDPVRLECARHNAAVYGVQDKIEFICGDFMEL 199

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           +     D +  +PP+        +  +V D +
Sbjct: 200 APTIKADGVFMSPPW---GGPQYIQADVFDLE 228


>gi|296130140|ref|YP_003637390.1| methyltransferase [Cellulomonas flavigena DSM 20109]
 gi|296021955|gb|ADG75191.1| methyltransferase [Cellulomonas flavigena DSM 20109]
          Length = 192

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 14/123 (11%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              L + S    P  E    V  AL   L  ++  D  R+LDL  G+GA+ L        
Sbjct: 11  GRTLAVPSSGTRPTSER---VREALFSRLEHLDAVDGARVLDLYAGSGALGLEAASRGAR 67

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----------SVEGLFDVIVSN 171
            + V V+ +  A+++ + NA + G+++R + +                     FD+++ +
Sbjct: 68  -RVVLVETARGAVDVCRRNARSLGLADRVEVVADRVDRYLARVAPTDGPAAESFDLVLLD 126

Query: 172 PPY 174
           PPY
Sbjct: 127 PPY 129


>gi|254492950|ref|ZP_05106121.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           1291]
 gi|226511990|gb|EEH61335.1| ribosomal protein L11 methyltransferase [Neisseria gonorrhoeae
           1291]
          Length = 295

 Score = 55.9 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F    S
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRSGRDNAEQNNVDAQFFLPDS 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|326577374|gb|EGE27258.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           O35E]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS----D 156
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R          D
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDD 224

Query: 157 WFSSVEGLFDVIVSN 171
           + +    L DVI +N
Sbjct: 225 YRTQNPQLADVITAN 239


>gi|312795214|ref|YP_004028136.1| Modification methylase XamI [Burkholderia rhizoxinica HKI 454]
 gi|312166989|emb|CBW73992.1| Modification methylase XamI (EC 2.1.1.72) [Burkholderia rhizoxinica
           HKI 454]
          Length = 539

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 31/180 (17%)

Query: 23  IVDPDSVLDDRQRFFLTNAIVRSLKHESIHRI-------------LGWRDFYNVRLTLSS 69
           +V P +VL   ++  L     R++K      +             LG   F  +R  +  
Sbjct: 27  LVGPSAVLSPGEKALLKKVSKRAIK---PAYLGTIRDNILAGNDPLGNA-FAAIRSAIER 82

Query: 70  D----TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
                 + P P    ++    A S P        RI+D G G+G   LA  +  P  + V
Sbjct: 83  RAAGAVYTPLPIVRSMMAWLSAQSTPS-------RIVDPGAGSGRFILAAGETFPDAQLV 135

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
            V++   A  + ++N    G ++R   L +D+              + NPPY+    +  
Sbjct: 136 AVEMDPLAALMLRANLSARGWTDRATLLVNDYREIKLPPCTGMTAFIGNPPYVRHHDIAE 195


>gi|304314357|ref|YP_003849504.1| cobalt-precorrin-6Y C(15)-methyltransferase [Methanothermobacter
           marburgensis str. Marburg]
 gi|302587816|gb|ADL58191.1| cobalt-precorrin-6Y C(15)-methyltransferase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 188

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 43/182 (23%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P P     V   L       +       +D+G GTG   + L       +   +D S  
Sbjct: 13  VPGPTAME-VRCLLMCL---ADPGKGDTAVDVGCGTG--GVTLELSRRAGRVYAIDKSPD 66

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           A+   + N   +G+ +    + SD   ++                  +D L         
Sbjct: 67  AISTTEMNLKKHGLGDNVTLICSDAVEAL----------------SEIDALD-------- 102

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKD 252
            I++ GG  G      I + V+  L   G   +            I    +   V   K+
Sbjct: 103 -IAVIGGSGGR--LGEILEMVTDKLTDGGRILI----------TAILLETRCEAVKYLKE 149

Query: 253 YG 254
            G
Sbjct: 150 LG 151


>gi|294142601|ref|YP_003558579.1| 50S ribosomal protein L11 methyltransferase [Shewanella violacea
           DSS12]
 gi|293329070|dbj|BAJ03801.1| ribosomal protein L11 methyltransferase [Shewanella violacea DSS12]
          Length = 293

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     +  G+DI  +A+E +K+NA  N V ++      +    
Sbjct: 162 VIDFGCGSGILAVAALKLGAK-EVTGIDIDYQAIEASKANAERNDVQDKLSLYLPE-DQP 219

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
            +   D++V+N        +  L  E      +++L G
Sbjct: 220 HDLKADILVANILAGPLRELAPLIAEKVKSGGQLALSG 257


>gi|239981782|ref|ZP_04704306.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces albus
           J1074]
 gi|291453643|ref|ZP_06593033.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces albus
           J1074]
 gi|291356592|gb|EFE83494.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces albus
           J1074]
          Length = 478

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++     +R+LD+G G G++ L   +E    + VGV +S +    A+  A   G
Sbjct: 188 LDLICRKLGLAPGMRLLDVGCGWGSMALHAAREY-GVQVVGVTLSREQAAYARKRAAEQG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D I S       + +      VR  +              
Sbjct: 247 LADRVEIRVQDYRDVRDGPYDAISS-------IGMAEHVGAVRYLEY------------- 286

Query: 206 YRTIADGVSRHLNKDGLCS 224
               A+ +   L   G   
Sbjct: 287 ----AEDLYALLKPSGRLL 301


>gi|237730842|ref|ZP_04561323.1| 23S rRNA(M-5-U747)-methyltransferase [Citrobacter sp. 30_2]
 gi|226906381|gb|EEH92299.1| 23S rRNA(M-5-U747)-methyltransferase [Citrobacter sp. 30_2]
          Length = 375

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F       ++     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFF--QTNPVVAGQLYATARDWVRQLPVNHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIV 169
            L     +P  K  G++I+ +A+  AK +A   G+    F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMKLTGIEIAPEAITCAKQSAQELGLQNLHFQALDSTQFATAQGEVPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|219871204|ref|YP_002475579.1| 23S rRNA methyluridine methyltransferase [Haemophilus parasuis
           SH0165]
 gi|219691408|gb|ACL32631.1| 23S rRNA methyluridine methyltransferase [Haemophilus parasuis
           SH0165]
          Length = 389

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 23/178 (12%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           R+    L ++   S   + + P   ++L+  Q  FLT             ++L  R F  
Sbjct: 158 RELPMLLAQLPEKSVVSLNIQPQHSAILEGEQEIFLTE-----------QQVLEER-FNQ 205

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----E 118
           + L +    F     T  +       +   I++R + ++ DL  G G   L         
Sbjct: 206 IPLFIRPQGFFQTNPT--VASQLYHTAQEWIKERPITQLWDLFCGVGGFGLHCANTLQTN 263

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG--LFDVIVSNPP 173
           +P     G++IS  A+  A  +A   G+   +F +L S  F+  E     D+++ NPP
Sbjct: 264 NPNVALTGIEISASAIASATKSAQQLGLQNVKFASLDSAQFALNEQGTTPDLVIVNPP 321


>gi|213420580|ref|ZP_03353646.1| hypothetical protein Salmonentericaenterica_23685 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 102

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERF 150
                DV RILD+GTG+G + L L + +        V++   A   A+ N   +    R 
Sbjct: 39  WAPVADVKRILDIGTGSGLLALMLAQRTDDSVPVDAVELDAGAAMQAQENVAHSPWPHRI 98

Query: 151 DTL 153
              
Sbjct: 99  TVH 101


>gi|327489452|gb|EGF21245.1| O-methyltransferase [Streptococcus sanguinis SK1058]
          Length = 227

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFED 185


>gi|291518832|emb|CBK74053.1| SAM-dependent methyltransferase [Butyrivibrio fibrisolvens 16/4]
          Length = 403

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 72/228 (31%), Gaps = 35/228 (15%)

Query: 14  VTGLSSHQV-IVDPDSVLDDRQRFFLTNAIVR-SLKHESIHRILGWRDFYNVRLTLSSDT 71
             G+   ++ IVD    +     F +     R   K  +   +  ++ F       + + 
Sbjct: 131 ALGIDKLKLKIVDMLKEIMTADGFKIRGVYERSDAKVRTKEGLAPYKGFIGEEFDTNVEI 190

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVV---------RILDLGTGTGAVCLALLKESPFF 122
            E      + V +         +K + +         R+LD  T  G   L         
Sbjct: 191 IENGVHYMVDVVNGQKTGFFLDQKYNRLSIQRLCKDKRVLDCFTHMGTFALN-AGLGGAS 249

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIE 176
           +  G+DIS  A+  A +NA  NG+       Q++    +         FDV++ +PP   
Sbjct: 250 EVTGLDISDFAVAQATANAKLNGLENTVKFKQANVLDELPKLAEAGEKFDVVILDPPAFT 309

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
                           + ++ G       YR I     + +   G  +
Sbjct: 310 KSREAT----------KNAIKG-------YREINMKGLKLVKDGGYLA 340


>gi|262402518|ref|ZP_06079079.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC586]
 gi|262351300|gb|EEZ00433.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio sp. RC586]
          Length = 413

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     +++ +    +L++GTG GA+ + + +     +     IS +  +  K      G
Sbjct: 185 MQRLCEQLQLKPTDHVLEIGTGWGAMAIYIAQNY-GCRVTTTTISEEQFDYTKQQITALG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SE+   L+ D +  +EG +D +VS
Sbjct: 244 LSEKITLLKQD-YRLLEGQYDKLVS 267


>gi|291615247|ref|YP_003525404.1| methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
 gi|291585359|gb|ADE13017.1| Methyltransferase type 11 [Sideroxydans lithotrophicus ES-1]
          Length = 285

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 77  ETELLVDSAL---AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKA 133
             + +VD         +   + RD  ++LD+  GTG   L+  K +P  K    D+S + 
Sbjct: 26  WDKFVVDWMAPIGEQLIRSAKLRDTSQVLDIAAGTGEPGLSAAKLTPRGKVTLTDLSERM 85

Query: 134 LEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVS 170
           LE+A  NA   G++    T Q D       +  FD ++ 
Sbjct: 86  LEVANENAAHRGLA-NVATRQCDACELPFADQSFDAVMC 123


>gi|196001639|ref|XP_002110687.1| hypothetical protein TRIADDRAFT_54966 [Trichoplax adhaerens]
 gi|190586638|gb|EDV26691.1| hypothetical protein TRIADDRAFT_54966 [Trichoplax adhaerens]
          Length = 196

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L              + DLG G G + +           VG+DI   AL IA+ N   
Sbjct: 36  HMLYNIDTMYNDIQGKLVCDLGCGCGVLSVGTAMLDASL-IVGIDIDDDALMIARRNIEE 94

Query: 144 NGVSERFDTLQSDWFSSV---EGLFDVIVSNPPY 174
             + E    ++++   +      +FD ++ NPP+
Sbjct: 95  FEL-ENVQLIKANISDTEFFGGKIFDTVIMNPPF 127


>gi|251797924|ref|YP_003012655.1| methyltransferase type 12 [Paenibacillus sp. JDR-2]
 gi|247545550|gb|ACT02569.1| Methyltransferase type 12 [Paenibacillus sp. JDR-2]
          Length = 235

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 6/114 (5%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG--AVCLALLKE 118
           Y+ +     + F P       V  A+  +   ++    +R+LDLG+G G  A+ +A   +
Sbjct: 15  YHEKFYAEHELFAPGTWIAKPV-KAIMDTFALLDPYQ-MRVLDLGSGVGRNAIPIAQAIK 72

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVS 170
           +   K   VD+   A+ I + NA    V    + + +D   F      +D I++
Sbjct: 73  ANNGKVTAVDLLPSAVAILQENAEKYDVINHLEAVVADIEHFQIPAESYDYIIA 126


>gi|29791720|gb|AAH50603.1| Methyltransferase 10 domain containing [Homo sapiens]
          Length = 562

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|324990577|gb|EGC22513.1| O-methyltransferase [Streptococcus sanguinis SK353]
          Length = 227

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFED 185


>gi|317028879|ref|XP_001390691.2| UbiE/COQ5 family methyltransferase [Aspergillus niger CBS 513.88]
          Length = 276

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 26/132 (19%)

Query: 96  RDVVRILDLGTGTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTL 153
           ++   ILDLG+G+G  V LA  K     + +GVD++ K +E+AK N    G+S  R    
Sbjct: 66  KEGETILDLGSGSGIDVLLAAHKVGRNGQAIGVDMTDKMIELAKKNIQKAGLSNARVIEA 125

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             +     +   D I+SN       +++ +                    +    +   +
Sbjct: 126 NINCIPLPDSSVDCIISN------CVINLVPA------------------ADKERVFKEI 161

Query: 214 SRHLNKDGLCSV 225
           +R L   G  ++
Sbjct: 162 ARLLKPGGRVAI 173


>gi|316932468|ref|YP_004107450.1| type 11 methyltransferase [Rhodopseudomonas palustris DX-1]
 gi|315600182|gb|ADU42717.1| Methyltransferase type 11 [Rhodopseudomonas palustris DX-1]
          Length = 341

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 28/143 (19%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA-KSNAV 142
            AL  ++   + RD   IL+LG G G++ LA+ ++ P  + V V  S    E   +  A 
Sbjct: 103 EALRLTIEHADLRDGQSILELGCGWGSLSLAMAEQFPHARIVSVSNSVSQREYIERETAA 162

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              ++ R  T   + F   E  FD +VS                V  F+  ++       
Sbjct: 163 RRLMNLRVVTSDMNVFEPHE-KFDRVVS----------------VEMFEHMMNW------ 199

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
               R +   +   L  DGL  +
Sbjct: 200 ----RKLMGWIRGWLKPDGLFFM 218


>gi|270159116|ref|ZP_06187772.1| ribosomal protein L11 methyltransferase [Legionella longbeachae
           D-4968]
 gi|289166049|ref|YP_003456187.1| Ribosomal protein L11 methyltransferase [Legionella longbeachae
           NSW150]
 gi|269987455|gb|EEZ93710.1| ribosomal protein L11 methyltransferase [Legionella longbeachae
           D-4968]
 gi|288859222|emb|CBJ13156.1| Ribosomal protein L11 methyltransferase [Legionella longbeachae
           NSW150]
          Length = 289

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTFEPRPE--TELLVDSALAF----------SLPRIEKRD--VVRILDLGT 106
           Y  RL +      P       L++D  LAF           L  +E+ +     I+D G 
Sbjct: 105 YGQRLWICPTWSTPPEPNAVNLMLDPGLAFGTGTHPTTALCLTWLEQANLSNKSIIDYGC 164

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + LA LK     +   VDI  +AL+   +NA+TN + E    L      +++   D
Sbjct: 165 GSGILSLAALKLGAK-EVYAVDIDPQALQATNNNALTNQLGEHQ--LLVSLPDALQHPVD 221

Query: 167 VIVSN 171
           +I++N
Sbjct: 222 LIIAN 226


>gi|294813082|ref|ZP_06771725.1| Trans-aconitate 2-methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|326441616|ref|ZP_08216350.1| trans-aconitate 2-methyltransferase [Streptomyces clavuligerus ATCC
           27064]
 gi|294325681|gb|EFG07324.1| Trans-aconitate 2-methyltransferase [Streptomyces clavuligerus ATCC
           27064]
          Length = 280

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 34/143 (23%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS----ERFD 151
           R  +RI D+G G G V   L +  P     G D S + +E A+     +G       R D
Sbjct: 47  RAPLRIADIGCGAGNVTALLAERWPDALITGFDNSPEMVEHAR---TAHGGPTAGGGRLD 103

Query: 152 TLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
             + D    + EG +D+IVSN       ++  +                       R + 
Sbjct: 104 FTEGDAHDWLPEGGYDLIVSN------AVLHWVPGH--------------------RALL 137

Query: 211 DGVSRHLNKDGLCSVEIGYNQKV 233
              +  LN  G+ + ++  N   
Sbjct: 138 GRWAEALNPGGVLAFQVPANFAA 160


>gi|110590476|pdb|2H00|A Chain A, Human Methyltransferase 10 Domain Containing Protein
 gi|110590477|pdb|2H00|B Chain B, Human Methyltransferase 10 Domain Containing Protein
 gi|110590478|pdb|2H00|C Chain C, Human Methyltransferase 10 Domain Containing Protein
          Length = 254

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 24  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 81

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 82  LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 141

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 201

Query: 214 SRHLN 218
            + L 
Sbjct: 202 KKRLR 206


>gi|153854119|ref|ZP_01995427.1| hypothetical protein DORLON_01418 [Dorea longicatena DSM 13814]
 gi|149753168|gb|EDM63099.1| hypothetical protein DORLON_01418 [Dorea longicatena DSM 13814]
          Length = 470

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + +   ++  ++  +F    +T  L  +     +   I   +   + DL +GTG +   L
Sbjct: 285 YEELLGLKFKITPFSFF---QTNSLGAEVLYETAREYIGDTNEKVVFDLYSGTGTIAQIL 341

Query: 116 LKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSN 171
               P  K  VGV+I  +A+E AK NA  N + +       D       +  + D+I+ +
Sbjct: 342 A---PVAKKVVGVEIVEEAVEAAKENAKLNNL-DNCTFWAGDVLKVIDELGEVPDLIMLD 397

Query: 172 PP 173
           PP
Sbjct: 398 PP 399


>gi|114665652|ref|XP_523533.2| PREDICTED: methyltransferase like 16 isoform 2 [Pan troglodytes]
          Length = 562

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|27376623|ref|NP_768152.1| cyclopropane-fatty-acyl-phospholipid synthase [Bradyrhizobium
           japonicum USDA 110]
 gi|27349764|dbj|BAC46777.1| blr1512 [Bradyrhizobium japonicum USDA 110]
          Length = 473

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 28/146 (19%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           + AL  ++      D   IL+LG G G++ L   ++ P  K   V  S       +  A 
Sbjct: 229 EEALRQTVAHAGLADGQTILELGCGWGSLSLWTARQFPHAKVTAVSNSQGQRAYVEEQAR 288

Query: 143 TNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             G+   R  T   + F+  EG FD IVS            +   V ++           
Sbjct: 289 LRGLLNLRVVTADMNVFAP-EGQFDRIVSV----------EMFEHVMNW----------- 326

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEI 227
                R +   +   L  +G   + I
Sbjct: 327 -----RKLMTRLRSWLAPEGRLFMHI 347


>gi|307169861|gb|EFN62370.1| HpaII tiny fragments locus 9c protein [Camponotus floridanus]
          Length = 583

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 52  HRILGWRDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
             I        ++  +S   F        E+L  +A+  + P  +    + +LD+  GTG
Sbjct: 367 EYI--EETLLGLKFRVSPQAFFQVNSSGAEVLYKAAIDLARPTKD----MALLDVCCGTG 420

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            + L   K     + +G++I   A++ AK N + NG++     +
Sbjct: 421 TIGLCFSKHCG--EVLGIEIIPDAIKDAKENVIKNGITNCEFFV 462


>gi|224493320|sp|A0KKF0|RLMI_AERHH RecName: Full=Ribosomal RNA large subunit methyltransferase I;
           AltName: Full=23S rRNA m5C1962 methyltransferase;
           AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
           RlmI
          Length = 397

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 25/135 (18%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQS 155
           +  R+L+    TG   +  LK     + V VD+S  AL+IA+ NA  NG+       ++ 
Sbjct: 221 EGKRVLNCFCYTGGFGVYALKGGAK-EVVNVDLSQNALDIARQNAELNGLDTSNTQFVRH 279

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           D F  +         FDVIV +PP         L              G   G   Y+ I
Sbjct: 280 DVFKLLREYREKGDKFDVIVLDPPKFAESKAQLL--------------GACRG---YKDI 322

Query: 210 ADGVSRHLNKDGLCS 224
                + L   G+  
Sbjct: 323 NMLAFQLLAPGGVLL 337


>gi|149191008|ref|ZP_01869269.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio shilonii AK1]
 gi|148835142|gb|EDL52118.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio shilonii AK1]
          Length = 418

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 12/126 (9%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F + R+  SS  +     T+ L + A    +     +++      ++++
Sbjct: 151 HYDLGNSLYETFLDERMLYSSGIYV--SPTDTL-EQAQLNKMERLCQQLQLVPEDHVIEI 207

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG G + + + K           IS +  + AK      G+ ++   L+ D +  +EG 
Sbjct: 208 GTGWGGMAIYMAKNY-GCHVTTTTISDEQFDYAKQQVEKAGLEDKITLLKQD-YRLLEGE 265

Query: 165 FDVIVS 170
           FD +VS
Sbjct: 266 FDKLVS 271


>gi|260905364|ref|ZP_05913686.1| putative methyltransferase [Brevibacterium linens BL2]
          Length = 209

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 54/160 (33%), Gaps = 40/160 (25%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             +  +   +    LD G G GA  + L  +   +   G D++  AL+ AK  A   GVS
Sbjct: 30  HLIKEVSGLESGTALDAGCGAGAEAIWLAAQ--GWDVTGADVANAALDHAKDRAAVAGVS 87

Query: 148 ERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
           +R   +Q+D  S + E  +D++ ++  Y    +                       L  Y
Sbjct: 88  DRVRWIQADLSSWAPETQYDLVTTH--YAHPAMPQ---------------------LDFY 124

Query: 207 RTIADGVSRHLNKDGLCSVE----------IGYNQKVDVV 236
             IAD     +   G   +            G +    V 
Sbjct: 125 GRIAD----WVAPGGTLLIVGHLHHGHGDSHGDSHPPAVA 160


>gi|325290286|ref|YP_004266467.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324965687|gb|ADY56466.1| demethylmenaquinone methyltransferase [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 238

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVS 147
           ++  ++    + ILDL  GTG + + + K   P  +  G+D S + LE A+ N +     
Sbjct: 42  TVQTVKAGPGLNILDLCCGTGKMVMEIGKRVGPSGRVTGLDFSEQMLEKARENLLEYPYR 101

Query: 148 ERFDTLQSDW--FSSVEGLFDVI 168
           +R D +Q D       +G FD +
Sbjct: 102 DRVDLIQGDAMKLPFEQGTFDGV 124


>gi|297183728|gb|ADI19852.1| methylase of polypeptide chain release factors [uncultured alpha
           proteobacterium EB000_46D07]
          Length = 71

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/62 (40%), Positives = 38/62 (61%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LDLGTG+G + LALL E P   GVG+DI+  AL  A+ NA +  + +R   ++  +  
Sbjct: 2   RLLDLGTGSGCLLLALLSELPEAYGVGIDINSDALATARCNAASLNLGDRAVFVEHSFTD 61

Query: 160 SV 161
            +
Sbjct: 62  DL 63


>gi|300784775|ref|YP_003765066.1| cyclopropane-fatty-acyl-phospholipid synthase [Amycolatopsis
           mediterranei U32]
 gi|299794289|gb|ADJ44664.1| cyclopropane-fatty-acyl-phospholipid synthase [Amycolatopsis
           mediterranei U32]
          Length = 418

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +  +T SS  F P  +        +   L     R+   +L++GTG G + +      
Sbjct: 163 FLDESMTYSSALFGPGDDLTAAQHRKIDSVLDYAGVREGSEVLEIGTGWGELAIRAAAR- 221

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVI 179
                  + IS +   +A       G S+R +    D+  S  G +D +VS         
Sbjct: 222 -GAHVTSLTISEEQRALATERIAAAGFSDRVEVKLCDYRES-SGRYDAVVS--------- 270

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           V+ +      + P           + Y TI       L   G   +
Sbjct: 271 VEMIEAVGASYWP-----------AFYTTI----GDRLRPGGRFGL 301


>gi|297462806|ref|XP_002702340.1| PREDICTED: N-6 adenine-specific DNA methyltransferase 1-like [Bos
           taurus]
          Length = 127

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSN 140
           +    A   P      V   L++G+G+G V   L     P    +  D++ +A       
Sbjct: 1   MHHVHAQPSPGQSCHRVEICLEVGSGSGVVSAFLASVIGPQALYMCTDVNPEAAACTLET 60

Query: 141 AVTNGVSER--FDTLQSDWFSSVEGLFDVIVSNPPYI 175
           A  N V  +     L       ++   D++V NPPY+
Sbjct: 61  ARCNKVHIQPIITDLVKGLLPRLKESVDLLVFNPPYV 97


>gi|168023808|ref|XP_001764429.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684293|gb|EDQ70696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 355

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 33/175 (18%)

Query: 59  DFYNV----RLTLSSDTFEPRPET--ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
           +FY++    RL  SS  F P+ ++  +   +S  A    R + +D   +LD+G G G++ 
Sbjct: 86  EFYHLVLGKRLKYSSAYF-PKKDSTLDEAEESMFALYAERAQLQDGQSVLDVGCGWGSLS 144

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           + + ++ P     GV  S              G+S            +++  FD I+S  
Sbjct: 145 MYIAEKFPNSNVTGVSNSETQRAFITEECRKRGLSNVTIITCDMNVFNIDKSFDRILS-- 202

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                       +E+ +             + +Y  +   +S  L  DGL  + I
Sbjct: 203 ------------IEMFEH------------MKNYEKLLKKISSWLKPDGLLFIHI 233


>gi|78213710|ref|YP_382489.1| hypothetical protein Syncc9605_2195 [Synechococcus sp. CC9605]
 gi|78198169|gb|ABB35934.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 400

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  RILD G GTG     L   +P    +GVDIS  AL +A+     +G +E+  +L+ +
Sbjct: 69  EAPRILDAGCGTGVSTDYLCHLNPGADVLGVDISDGALAVARERCRRSGAAEQVTSLRQE 128

Query: 157 WFSSV----EGLFDVIVS 170
             S +    EG FD I S
Sbjct: 129 QRSLLDLSDEGSFDYINS 146


>gi|325201498|gb|ADY96952.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240149]
          Length = 295

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   + NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGRDNAAQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|302551940|ref|ZP_07304282.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469558|gb|EFL32651.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 438

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 14/178 (7%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESI--HRILGWRD 59
           QALRD       V GL        P +   +  R    +   +     +I  H  +G  D
Sbjct: 101 QALRDPEV-RSAVRGLVKLAGSPLPPAPPPEEARSPRRHLHTKRSDRRAISHHYDVGN-D 158

Query: 60  FYNVRL---TLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVC 112
           FY + L    + S  + P P++ L  + A    L     ++  +   R+LD+G G G++ 
Sbjct: 159 FYEIVLGPSMVYSCAYWPTPDSTL--EQAQHDKLELVCRKLGLKPGQRLLDVGCGWGSMA 216

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L   +E      VGV +S +    A+      G++++ +    D+    +G +D I S
Sbjct: 217 LHAAREHGVA-VVGVTLSQEQAAYARKRVADEGLTDKVEIRVQDYRDVRDGPYDAISS 273


>gi|294817071|ref|ZP_06775713.1| Methyltransferase family protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294321886|gb|EFG04021.1| Methyltransferase family protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 916

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 39/168 (23%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F++       +  +PRP   L            + +      LDLG GTG   L L ++ 
Sbjct: 28  FWDGVYADRPEAMDPRPNVRL---------TGTVAELPPGDALDLGCGTGGDALWLARQ- 77

Query: 120 PFFKGVGVDISCKALE-IAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPYIES 177
             ++   VDIS  A+E +A   A  + +  R   ++ D  +S   G FD+I ++  Y+ +
Sbjct: 78  -GWRVTAVDISAVAVERLAGL-ARAHALDGRVSAVRHDLRTSFPSGGFDLISAH--YLHT 133

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                       FD   +             +    +R L   G   V
Sbjct: 134 P-----------FDLDRA------------AVLRSATRALRPGGRLLV 158


>gi|262283151|ref|ZP_06060918.1| O-methyltransferase [Streptococcus sp. 2_1_36FAA]
 gi|262261403|gb|EEY80102.1| O-methyltransferase [Streptococcus sp. 2_1_36FAA]
          Length = 228

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAMDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|197104246|ref|YP_002129623.1| methyltransferase [Phenylobacterium zucineum HLK1]
 gi|196477666|gb|ACG77194.1| methyltransferase [Phenylobacterium zucineum HLK1]
          Length = 246

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 15/151 (9%)

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL----FDVIVSNPP 173
             P    VGV+   +AL +A+ N   NG+ +R   L  D       L    FD  ++NPP
Sbjct: 61  RRPGASFVGVERDPEALALAQENVALNGLQDRVQVLAGDVGVPFAKLGLPAFDAAMANPP 120

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
           + ++             +   +      GLS +        R   + G  ++    ++  
Sbjct: 121 FFDNPAALRAPAA----EKTAAWMA-EGGLSAWTGFLSKAVR---EGGTITIIHRADRLA 172

Query: 234 DVVRIF-ESRKLFLVNAFKDYGGND--RVLL 261
           D++         F V     + G    RV++
Sbjct: 173 DLLAGLSPKAGSFQVRPVHAFAGEPAKRVIV 203


>gi|82776062|ref|YP_402409.1| 23S rRNA methyluridine methyltransferase [Shigella dysenteriae
           Sd197]
 gi|309786469|ref|ZP_07681093.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella dysenteriae
           1617]
 gi|123563144|sp|Q32ID7|RUMB_SHIDS RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|81240210|gb|ABB60920.1| putative enzyme [Shigella dysenteriae Sd197]
 gi|308925657|gb|EFP71140.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella dysenteriae
           1617]
          Length = 375

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVTHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTCLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|159903949|ref|YP_001551293.1| putative methyltransferase for ribosomal protein L11
           [Prochlorococcus marinus str. MIT 9211]
 gi|159889125|gb|ABX09339.1| putative methyltransferase for Ribosomal protein L11
           [Prochlorococcus marinus str. MIT 9211]
          Length = 305

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 38/165 (23%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER-FDT 152
           ++   +RI+D+G G+G + LA        + +GVDI   A+  A+ NA  N   E  F T
Sbjct: 157 QRPKDLRIVDIGCGSGVLGLA-ALRLGAKEVIGVDIDPLAIGSAQRNAFLNDFDENSFRT 215

Query: 153 LQSDW---FSSVEG-LFDVIVSNPPYIESVIVDCLGLEV-RDFDPR-ISLDGGIDGLSHY 206
                    + ++G   D+++ N   I + ++  LG +  R   P+  +L  G       
Sbjct: 216 FHGSIDTVHNELQGAKADLLLCN---ILAPVIKTLGEDFDRVISPQGNALISG------- 265

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                             VE    Q  D+ +         + +++
Sbjct: 266 ----------------LLVE----QMQDITKFLVDLGWNFIASYQ 290


>gi|325697159|gb|EGD39046.1| O-methyltransferase [Streptococcus sanguinis SK160]
          Length = 227

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++           +D    +   F P                 
Sbjct: 124 LEGDAMDLLETLEDSYDLVF----------MDSAKSKYVVFLPH---------------- 157

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 158 ---VLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|324112659|gb|EGC06635.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia fergusonii
           B253]
          Length = 375

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   +++  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVQQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|319937203|ref|ZP_08011610.1| hypothetical protein HMPREF9488_02445 [Coprobacillus sp. 29_1]
 gi|319807569|gb|EFW04162.1| hypothetical protein HMPREF9488_02445 [Coprobacillus sp. 29_1]
          Length = 452

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 9/98 (9%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V+     ++   + +    ++D   G G + L++ K     K  GV+I  +A+  AK NA
Sbjct: 287 VEHLYQKAIEFADLKPTDEVIDAYCGIGTISLSMAKYVK--KVYGVEIVEQAIIDAKENA 344

Query: 142 VTNGVSERFDTLQSDW------FSSVEGLFDVIVSNPP 173
             N VS   +    D       F+  +   DV++ +PP
Sbjct: 345 QRNHVS-NVEFTCQDAGEFMVEFAKQQKHIDVVMVDPP 381


>gi|312134179|ref|YP_004001517.1| O-methyltransferase-like protein [Caldicellulosiruptor owensensis
           OL]
 gi|311774230|gb|ADQ03717.1| O-methyltransferase-like protein [Caldicellulosiruptor owensensis
           OL]
          Length = 240

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 59/151 (39%), Gaps = 20/151 (13%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSNA 141
           D+ +     +++K D+  +++ GTG   + + L  K   F K   ++I  +  E+A  N 
Sbjct: 26  DAVVLSDFIQLKKNDI--VVEFGTGNLIIPILLWAKGKKFKKLYALEIQKEVCELAILNR 83

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
             N + +R + + +D   +++       +V+ +NPPY +     I   +   +   +   
Sbjct: 84  NINNLQDRIEVINADLKDALKIFGSEFANVVFTNPPYRKVNSGTINPNIKKAIARHEIMC 143

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +             +     + L   G   +
Sbjct: 144 T----------IEDVIRSAMQILKFGGRFYM 164


>gi|303240940|ref|ZP_07327451.1| protein of unknown function Met10 [Acetivibrio cellulolyticus CD2]
 gi|302591526|gb|EFL61263.1| protein of unknown function Met10 [Acetivibrio cellulolyticus CD2]
          Length = 389

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 24/132 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            ++LD  + TG+  L           +G+DIS  A+E A  NA  N +        ++ F
Sbjct: 216 AKVLDCFSHTGSFALH-AGYYGASNVLGIDISDHAVECASRNAKLNNLDGVCTFEAANTF 274

Query: 159 SSV------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FD I+ +PP                   R +++G + G   Y+ I   
Sbjct: 275 DKLREFYDTNEQFDTIILDPPAFTKT--------------RGAVEGAVRG---YKEINLR 317

Query: 213 VSRHLNKDGLCS 224
             + +   G   
Sbjct: 318 AMKIIKPGGFLV 329


>gi|240145923|ref|ZP_04744524.1| ribosomal protein L11 methyltransferase [Roseburia intestinalis
           L1-82]
 gi|257201988|gb|EEV00273.1| ribosomal protein L11 methyltransferase [Roseburia intestinalis
           L1-82]
          Length = 327

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 50/166 (30%), Gaps = 41/166 (24%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            +    ++LD+G G+G + + +  +    + VG D+    +     N   N +  R    
Sbjct: 179 PENKTPKVLDVGCGSGILSI-VALKLGASEVVGTDLDPDCMTSTHENFEVNHLDSRLGIF 237

Query: 154 Q-SDWFSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
              +    VE         +D++V+N                      ++          
Sbjct: 238 YVGNLIDDVELQEKVGTEEYDIVVAN---------------------ILA--------DV 268

Query: 206 YRTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKLFLVNA 249
              +A  +   L K G       I + +   V    E   L +V  
Sbjct: 269 IIPMAPVIPARLKKGGYFITSGIIDFKE-DQVKEAIEKAGLTVVEI 313


>gi|225556458|gb|EEH04746.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 450

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 33/153 (21%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              LV + +   L     ++  +++DL TG+G   +      P  + +G D+S       
Sbjct: 259 HHALVMTIMDERLFLAPVKNPTKVIDLCTGSGIWAVEFADMFPECEVIGNDLSP-----T 313

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
           + + V   +    D +++DW    +  FD+I  +  Y+   I D                
Sbjct: 314 QPSLVPPNLQFIVDDVEADWLYE-DTPFDLI--HARYLAESIRDMP-------------- 356

Query: 198 GGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                      + +         G       ++
Sbjct: 357 ----------RLLEQAYNCTKPGGWVEF-HDWD 378


>gi|237837693|ref|XP_002368144.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
 gi|211965808|gb|EEB01004.1| hypothetical protein TGME49_032750 [Toxoplasma gondii ME49]
 gi|221488591|gb|EEE26805.1| conserved hypothetical protein [Toxoplasma gondii GT1]
 gi|221509090|gb|EEE34659.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 383

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 13/121 (10%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  A+  + P   K   +++LD+G G   V   L      +  VG DIS ++LE+A+ N 
Sbjct: 113 VRHAVQEAQPLRGKH--IKVLDIGVGANCVYPLLGCTEYGWTFVGSDISERSLELARENV 170

Query: 142 VTNGVSERFDTLQ----SDWFSSV---EGLFDVIVSNPPYIESVIVDCLGL----EVRDF 190
             NG+            + +FS V     LF + + NPP+ ES     +      E ++ 
Sbjct: 171 NLNGLEPCVHLRHQQDPAKFFSGVVENGELFALSMCNPPFHESTDQVNVCPFRVLEAQNH 230

Query: 191 D 191
           +
Sbjct: 231 E 231


>gi|149915881|ref|ZP_01904405.1| para-aminobenzoate synthase component I [Roseobacter sp. AzwK-3b]
 gi|149810204|gb|EDM70050.1| para-aminobenzoate synthase component I [Roseobacter sp. AzwK-3b]
          Length = 404

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 74  PRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
            R     L ++A       I  +      +R+LD+G G G + L L ++    + +GV +
Sbjct: 143 FREPDMTL-EAAQEAKKRHIADKLLIEPGMRVLDIGCGWGGMGLTLARDY-GAEVLGVTL 200

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           S +   +A + A   G++ +      D +  +EG FD IVS
Sbjct: 201 SREQHAMANARAEQAGLASKARFELMD-YRKLEGTFDRIVS 240


>gi|107026560|ref|YP_624071.1| methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116692250|ref|YP_837783.1| methyltransferase type 11 [Burkholderia cenocepacia HI2424]
 gi|105895934|gb|ABF79098.1| Methyltransferase type 11 [Burkholderia cenocepacia AU 1054]
 gi|116650250|gb|ABK10890.1| Methyltransferase type 11 [Burkholderia cenocepacia HI2424]
          Length = 282

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A   GV  RF       
Sbjct: 50  TRVLDVGCGTGAVTLAIARRLGASAQCTGIDISARMIDAARARAERGGVPARFVCADVQT 109

Query: 158 FSSVEGLFDVIVS 170
            +      D+IVS
Sbjct: 110 HAFEPASVDLIVS 122


>gi|125975563|ref|YP_001039473.1| putative RNA methylase [Clostridium thermocellum ATCC 27405]
 gi|256005933|ref|ZP_05430877.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|281416574|ref|ZP_06247594.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|125715788|gb|ABN54280.1| putative RNA methylase [Clostridium thermocellum ATCC 27405]
 gi|255990104|gb|EEU00242.1| putative RNA methylase [Clostridium thermocellum DSM 2360]
 gi|281407976|gb|EFB38234.1| putative RNA methylase [Clostridium thermocellum JW20]
 gi|316939680|gb|ADU73714.1| rRNA (guanine-N(2)-)-methyltransferase [Clostridium thermocellum
           DSM 1313]
          Length = 378

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 39/111 (35%)

Query: 103 DLGTGTGAVCL----------------------------------ALLKESPF----FKG 124
           D   G+G + +                                  AL   +       K 
Sbjct: 196 DCFCGSGTIPIEAALIGRNIAPGLNRTFASEEWPAIGKDIWKQERALALRAIDHDIKLKI 255

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPY 174
            G DI+  A+E+AK NA   GV +  +   SD+ + +++  + VI+ NPPY
Sbjct: 256 YGSDINPDAIELAKENACLAGVDDCIEFFVSDFRNVNIKEDYGVIICNPPY 306


>gi|328952253|ref|YP_004369587.1| Methyltransferase type 12 [Desulfobacca acetoxidans DSM 11109]
 gi|328452577|gb|AEB08406.1| Methyltransferase type 12 [Desulfobacca acetoxidans DSM 11109]
          Length = 265

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   RIL++G G G     L +  P      VD++  A+++A+         +  + L 
Sbjct: 41  GRQYSRILEIGCGVGHYTQMLRRAFPEALITAVDLAPAAIQVAR---QRLAAEKNIEWLM 97

Query: 155 SDWFSSVEGLFDVIVSN 171
           +D    V G FD+I +N
Sbjct: 98  ADGEEIVRGRFDLITAN 114


>gi|256810678|ref|YP_003128047.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
 gi|256793878|gb|ACV24547.1| protein of unknown function Met10 [Methanocaldococcus fervens AG86]
          Length = 385

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL+ A+ N   N +  ++++ ++
Sbjct: 211 KEGDRVLDICCYTGGFSVHAAIR--GAEVVGVDLSKKALKTAEENMELNNIPKDKYEFIE 268

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVDC 182
            + F  ++        FDV+V +PP         
Sbjct: 269 GNAFEVMKEFIEDGEKFDVVVLDPPAFAQSKKAL 302


>gi|239945768|ref|ZP_04697705.1| putative cyclopropane fatty acid synthase [Streptomyces roseosporus
           NRRL 15998]
 gi|239992239|ref|ZP_04712903.1| putative cyclopropane fatty acid synthase [Streptomyces roseosporus
           NRRL 11379]
 gi|291449225|ref|ZP_06588615.1| cyclopropane fatty acid synthase [Streptomyces roseosporus NRRL
           15998]
 gi|291352172|gb|EFE79076.1| cyclopropane fatty acid synthase [Streptomyces roseosporus NRRL
           15998]
          Length = 432

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  +   R+LD+G G G++ L  ++     + VGV IS +   +A+      G
Sbjct: 183 LDLICRKLGLKPGQRLLDVGCGWGSMVLHAVQHY-GVEAVGVTISEEQAALARKRLAEAG 241

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
            ++R +    D+    +G FD I S            +   V              G + 
Sbjct: 242 CTDRAEIRVQDYREIDDGPFDAISS----------IGMAEHV--------------GSAQ 277

Query: 206 YRTIADGVSRHLNKDGLCS 224
           YR  A  +   L   G   
Sbjct: 278 YRAYARILHSLLKPGGRLL 296


>gi|225024584|ref|ZP_03713776.1| hypothetical protein EIKCOROL_01461 [Eikenella corrodens ATCC
           23834]
 gi|224942735|gb|EEG23944.1| hypothetical protein EIKCOROL_01461 [Eikenella corrodens ATCC
           23834]
          Length = 430

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +A ++  ++ +   RI DL  G G   L +       + +G++ S +  E A  NA  N 
Sbjct: 271 VARAIQLLQPQPGERIADLFCGLGNFSLPIAAA--GAQVIGIEGSPELTERASQNARLNH 328

Query: 146 VSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
           ++ER     +D F + E      G FD I+ +PP
Sbjct: 329 LAERAQFHSADLFQTTEHTVAGWGYFDKILLDPP 362


>gi|224500664|ref|ZP_03669013.1| hypothetical protein LmonF1_13726 [Listeria monocytogenes Finland
           1988]
 gi|254936500|ref|ZP_05268197.1| methyltransferase [Listeria monocytogenes F6900]
 gi|258609094|gb|EEW21702.1| methyltransferase [Listeria monocytogenes F6900]
          Length = 183

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 6   LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 65

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 66  ASDRVKVLLTDAIEGAEEILAHGPFDAI 93


>gi|94968200|ref|YP_590248.1| hypothetical protein Acid345_1171 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550250|gb|ABF40174.1| conserved hypothetical protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 351

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 42/114 (36%)

Query: 55  LGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           +GW +            F P     L+     A S  + +     ++ D+G G GA  + 
Sbjct: 129 MGWYEHDEAVFHGCEKFFRPGYTMNLVSSWIPALSGVKEKLERGAKVADIGCGKGASTIL 188

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           L K  P     G D   K++E+A+  A   GV +R     +         +D +
Sbjct: 189 LAKAFPNSNIFGFDYHDKSIEMAREAARLEGVDDRVTFQLASAKEFPGDGYDFV 242


>gi|21112385|gb|AAM40627.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|66574548|gb|AAY49958.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris str. 8004]
          Length = 456

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 213 LERICEKLRLGPQHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELATQRIAAAG 271

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SER   L  D +  +EG +D +VS
Sbjct: 272 LSERVTVLLRD-YRDLEGHYDRVVS 295


>gi|322513991|ref|ZP_08067066.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
           ATCC 25976]
 gi|322120217|gb|EFX92175.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus ureae
           ATCC 25976]
          Length = 236

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ +        G+D++ + LEI
Sbjct: 28  PIHLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMARA--GANVTGIDMTTEPLEI 85

Query: 137 AKSNAVTNGV-----SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  +G+         +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEESGLTIDYQQATIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  +G+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPNGVLFF 153


>gi|37521086|ref|NP_924463.1| hypothetical protein glr1517 [Gloeobacter violaceus PCC 7421]
 gi|35212082|dbj|BAC89458.1| glr1517 [Gloeobacter violaceus PCC 7421]
          Length = 430

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSD 156
            +RILD G G+G   LAL + +P  + V +D+S  +L +A      +G ++  F  L  +
Sbjct: 55  PLRILDAGCGSGYTSLALAQANPGAQLVCLDLSAASLAVACERLAFHGFTDVEFHDLPIE 114

Query: 157 WFSSVEGLFDVIVS 170
               +   FD+I  
Sbjct: 115 RVGELGRHFDLINC 128


>gi|17547507|ref|NP_520909.1| ribosomal protein L11 methyltransferase [Ralstonia solanacearum
           GMI1000]
 gi|38605396|sp|Q8XVP2|PRMA_RALSO RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|17429810|emb|CAD16495.1| probable ribosomal protein l11 methyltransferase (l11 mtase)
           [Ralstonia solanacearum GMI1000]
          Length = 298

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERTLDYGCGSGILAI-VAKKLGTGETVGVDIDPNAVEASRYNAERN- 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
              R +   S    + EG FD++V+N
Sbjct: 212 ---RVEAGFSLPGDAPEGTFDLVVAN 234


>gi|326571411|gb|EGE21426.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis BC7]
 gi|326576608|gb|EGE26515.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           101P30B1]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 HRTQNPQLADVITAN 239


>gi|291458758|ref|ZP_06598148.1| SAM-dependent methyltransferase [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291418675|gb|EFE92394.1| SAM-dependent methyltransferase [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 261

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG-----VGVDISCK 132
           T  +    +  +   ++  +    LD+G G+GA+ +A+ K +P  +       G + +  
Sbjct: 74  TRQMARQIIEGTASYVKLPEGGSCLDIGCGSGALGIAVAKRNPGARVIGIDRWGREYASF 133

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPY--IESVIVDCLGLE 186
           +  + + NA   GVS      + D       +  FD + SN  Y  I S     + LE
Sbjct: 134 SKALCEGNAEAEGVS-NICFRKGDALHLDFPDESFDAVTSNYVYHNIPSHDRQAILLE 190


>gi|260914497|ref|ZP_05920966.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC
           43325]
 gi|260631598|gb|EEX49780.1| ribosomal protein L11 methyltransferase [Pasteurella dagmatis ATCC
           43325]
          Length = 293

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK       VG+DI  +A+  +++NA  NGV+++     S     
Sbjct: 162 VIDFGCGSGILAIAALKLGAKS-AVGIDIDPQAILASRNNAEQNGVADKLQLFLS-ADKP 219

Query: 161 VEGLFDVIVSN 171
           V+   DV+V+N
Sbjct: 220 VDLKADVVVAN 230


>gi|290893858|ref|ZP_06556836.1| O-methyltransferase [Listeria monocytogenes FSL J2-071]
 gi|290556575|gb|EFD90111.1| O-methyltransferase [Listeria monocytogenes FSL J2-071]
          Length = 183

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 6   LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 65

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 66  ASDRVKVLLTDAIEGAEEILAHGPFDAI 93


>gi|241759137|ref|ZP_04757245.1| ribosomal protein L11 methyltransferase [Neisseria flavescens
           SK114]
 gi|319639456|ref|ZP_07994206.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102]
 gi|241320556|gb|EER56833.1| ribosomal protein L11 methyltransferase [Neisseria flavescens
           SK114]
 gi|317399351|gb|EFV80022.1| ribosomal protein L11 methyltransferase [Neisseria mucosa C102]
          Length = 295

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F     
Sbjct: 162 KGGESVLDYGCGSGILAIAALKLGAGS-AIGVDIDEQAIRASKDNAAQNNVDAQFYLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|187778559|ref|ZP_02995032.1| hypothetical protein CLOSPO_02154 [Clostridium sporogenes ATCC
           15579]
 gi|187772184|gb|EDU35986.1| hypothetical protein CLOSPO_02154 [Clostridium sporogenes ATCC
           15579]
          Length = 451

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 59/146 (40%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+ +  + +  D       ++   D+I
Sbjct: 323 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-DNCEFIAGDVAKVIKDLKQKPDII 378

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 379 ILDPP---RPGVHPVALEYVVKFEPK 401


>gi|152976525|ref|YP_001376042.1| biotin biosynthesis protein BioC [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025277|gb|ABS23047.1| biotin biosynthesis protein BioC [Bacillus cytotoxicus NVH 391-98]
          Length = 285

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +    L+    R  K   +RIL+LG GTG +   L+   P  +   +D +   + +AK  
Sbjct: 28  MARHLLSQLEKRYSKAAAIRILELGCGTGYITEKLVHLFPNAQITAIDFAESMIAVAKQR 87

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
              + V+ R + ++          +DVI+SN
Sbjct: 88  RHVDEVTFRCEDIEKLILDDF---YDVIISN 115


>gi|313145597|ref|ZP_07807790.1| methyltransferase [Bacteroides fragilis 3_1_12]
 gi|313134364|gb|EFR51724.1| methyltransferase [Bacteroides fragilis 3_1_12]
          Length = 201

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 46/184 (25%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-SNAVTNG 145
            + +  +E      +LD+G G GA    +LK  P  K  G+DIS +++  A+  N    G
Sbjct: 28  HWGMSCMEWHQGWNVLDIGCGGGANLAQILKYCPQGKAFGIDISPESVAFARKRNRRQLG 87

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                +    D     +  F+V+ +    Y  S +                         
Sbjct: 88  TRCFVEQGSVDQLPYSDHSFNVVTAFETIYFWSDLQHT---------------------- 125

Query: 205 HYRTIADGVSRHLNKDG--LCSVEIGY---------------NQKVDVVRIFESRKLFLV 247
                   V+R L   G  L   E+                   +  +     +     +
Sbjct: 126 -----FTEVARVLKPGGAFLICCEMSDPTNEVWTSRVEGMVVYSEDQLKATLVNAGFTNI 180

Query: 248 NAFK 251
             ++
Sbjct: 181 AMYR 184


>gi|260433956|ref|ZP_05787927.1| cyclopropane-fatty-acyl-phospholipid synthase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417784|gb|EEX11043.1| cyclopropane-fatty-acyl-phospholipid synthase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 402

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 9/145 (6%)

Query: 32  DRQRFFLTN-AIVRSLKHESIHRILGWRDFY----NVRLTLSSDTFEPRPETELLVDSA- 85
           +R RF+L      ++ K+ S H  LG  DFY    +  +T SS  FE   E+      A 
Sbjct: 115 ERLRFWLQRNHRKQARKNISYHYDLGN-DFYAAWLDDTMTYSSALFETGQESLEKAQIAK 173

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
            A  +  +  +    +L++G G G       KE    +  G+ IS + L+ A+      G
Sbjct: 174 YASMVDEMGVKPGDHVLEIGCGWGGFAEYAAKER-GLRVTGLTISQEQLKYARQRIEKAG 232

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +S+R +    D+     G +D I S
Sbjct: 233 LSDRVELKLQDYRDE-RGQYDGIAS 256


>gi|255007889|ref|ZP_05280015.1| putative methyltransferase [Bacteroides fragilis 3_1_12]
          Length = 211

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 46/184 (25%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK-SNAVTNG 145
            + +  +E      +LD+G G GA    +LK  P  K  G+DIS +++  A+  N    G
Sbjct: 38  HWGMSCMEWHQGWNVLDIGCGGGANLAQILKYCPQGKAFGIDISPESVAFARKRNRRQLG 97

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS-NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                +    D     +  F+V+ +    Y  S +                         
Sbjct: 98  TRCFVEQGSVDQLPYSDHSFNVVTAFETIYFWSDLQHT---------------------- 135

Query: 205 HYRTIADGVSRHLNKDG--LCSVEIGY---------------NQKVDVVRIFESRKLFLV 247
                   V+R L   G  L   E+                   +  +     +     +
Sbjct: 136 -----FTEVARVLKPGGAFLICCEMSDPTNEVWTSRVEGMVVYSEDQLKATLVNAGFTNI 190

Query: 248 NAFK 251
             ++
Sbjct: 191 AMYR 194


>gi|269861208|ref|XP_002650317.1| polypeptide chain release factor methylase [Enterocytozoon bieneusi
           H348]
 gi|220066230|gb|EED43721.1| polypeptide chain release factor methylase [Enterocytozoon bieneusi
           H348]
          Length = 183

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 63/158 (39%), Gaps = 26/158 (16%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y          +EP  ++   +D        + E      ILD+G  +  +   LLK +
Sbjct: 1   MYGYNFDF----YEPGEDSYAFLD------FLKTENIKNKFILDMGC-STCILTDLLKIN 49

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESV 178
                + +D + KAL     N +++     ++ +  D F  +    FD+I+ NPPY+   
Sbjct: 50  NC--VISLDKNIKALNYIVKNIISH----NYNLVYGDLFIGINPSVFDIIIFNPPYV--- 100

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
               L  E  +++  I + GG DG        D ++ +
Sbjct: 101 ----LDTETIEYEDYI-VTGGPDGCKVINQFIDILNNY 133


>gi|115524138|ref|YP_781049.1| ribosomal L11 methyltransferase [Rhodopseudomonas palustris BisA53]
 gi|115518085|gb|ABJ06069.1| LSU ribosomal protein L11P methyltransferase [Rhodopseudomonas
           palustris BisA53]
          Length = 294

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
           LL+D  L       ++R++  +LDLGTGTG + +A  K +     +  DI   ++ +A  
Sbjct: 143 LLLDEVL-------KRRELRCVLDLGTGTGVLGIAAAKATHRP-VLASDIDPVSVRVACD 194

Query: 140 NAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSN 171
           NA  NGV   F+ + +  F+      +  FD++++N
Sbjct: 195 NAWLNGVGHLFEGVCAAGFADARFRAKAPFDLVLAN 230


>gi|82913637|ref|XP_728723.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485219|gb|EAA20288.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 249

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 30/153 (19%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  ++ R    +LD+G G G +  A+    P  + VGVD+S   +  A+  A  +  + 
Sbjct: 23  LLAGLKLRPDDAVLDVGCGDGRITAAIADRVPQGRAVGVDLSSDMIGHAQ--AHHHRPNL 80

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            F  + +      +  F  + SN               ++D  P ++             
Sbjct: 81  AFRRIDAQNL-PFDAEFTAVFSN----------AALHWIKDHRPALA------------- 116

Query: 209 IADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFE 240
              G++R L   G C +E+ G+     V+  FE
Sbjct: 117 ---GIARALKPGGRCLLEMGGHGNGAGVIAXFE 146


>gi|113476020|ref|YP_722081.1| type 11 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110167068|gb|ABG51608.1| Methyltransferase type 11 [Trichodesmium erythraeum IMS101]
          Length = 439

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL----PRIEKRDVVRILDLGTGTGAVC 112
            + F  +          P+ + ELL              ++ +     ILD   G+G   
Sbjct: 13  RQQFDGLPYPKIPVEKSPKDDYELLFLHNFITPYYLRNQKVIETKGKMILDAACGSGYKS 72

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVI 168
           L L + +P  K VG+DIS K++E+A+     +G     F  L  +   S+   FD I
Sbjct: 73  LVLAEANPGAKIVGIDISEKSVELARQRLQYHGFDNAEFHVLSIEELPSLGLKFDYI 129


>gi|326561510|gb|EGE11854.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           46P47B1]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS----D 156
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R          D
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFND 224

Query: 157 WFSSVEGLFDVIVSN 171
           + +    L DVI +N
Sbjct: 225 YRTQNPQLADVITAN 239


>gi|225077502|ref|ZP_03720701.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens
           NRL30031/H210]
 gi|224951164|gb|EEG32373.1| hypothetical protein NEIFLAOT_02565 [Neisseria flavescens
           NRL30031/H210]
          Length = 295

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F     
Sbjct: 162 KGGESVLDYGCGSGILAIAALKLGAGS-AIGVDIDEQAIRASKDNAAQNNVDAQFYLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|77747798|ref|NP_636703.2| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|77761265|ref|YP_243978.2| cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188992363|ref|YP_001904373.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167734123|emb|CAP52329.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthomonas
           campestris pv. campestris]
          Length = 431

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++       ++++GTG G   L   +E    +     IS +  E+A       G
Sbjct: 188 LERICEKLRLGPQHHVVEIGTGWGGFALHAAREH-GCRVTTTTISREQFELATQRIAAAG 246

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +SER   L  D +  +EG +D +VS
Sbjct: 247 LSERVTVLLRD-YRDLEGHYDRVVS 270


>gi|332526088|ref|ZP_08402226.1| Mg-protoporphyrin IX methyl transferase [Rubrivivax benzoatilyticus
           JA2]
 gi|332109931|gb|EGJ10559.1| Mg-protoporphyrin IX methyl transferase [Rubrivivax benzoatilyticus
           JA2]
          Length = 233

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R+LD G GTGA  + L +     + V +D+S   +  A+     +      D    D   
Sbjct: 64  RVLDAGCGTGAASIELARR--GAEVVAIDLSPTLVGYARERLPESLGPGSIDFRSGDMLD 121

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD-----------PRISL 196
           +  G FD +++    I     D +    R  +           PR +L
Sbjct: 122 AALGRFDHVIAMDSVIHYDAPDAVAALSRLAERTSTSMVFTFAPRTAL 169


>gi|269216929|ref|ZP_06160783.1| methyltransferase domain protein [Slackia exigua ATCC 700122]
 gi|269129736|gb|EEZ60820.1| methyltransferase domain protein [Slackia exigua ATCC 700122]
          Length = 279

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D  +      +E    +R+LD+G G+G   LAL       + VG+DIS K +E A+  A 
Sbjct: 51  DPFIRMLDDEVEFTPDMRVLDIGCGSGIYGLALASRVG--EVVGIDISPKMIEAAREKAC 108

Query: 143 TNGVSERFDTLQSDWFS-SVEGLFDVIVSN 171
              V      +QSD+   + +  FD++ ++
Sbjct: 109 ALDVR-NVRFVQSDFRDMAFDEGFDLVFAH 137


>gi|258646651|ref|ZP_05734120.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Dialister invisus DSM
           15470]
 gi|260404073|gb|EEW97620.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Dialister invisus DSM
           15470]
          Length = 468

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 15/123 (12%)

Query: 58  RDFYNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
                ++  +S  +F    + + E+L + AL ++    + +    ++D   GTG + L L
Sbjct: 282 ASLCGLQFEVSPYSFFQVHKEQAEILYEKALEYA----DLKGGETVIDAYCGTGTISLCL 337

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIV 169
            K++   + +G++I   A+E AK NA  N +    +   +D    +  L+      DVIV
Sbjct: 338 AKKAK--RVIGIEIVKPAIEDAKKNAKKNHMENT-EFYAADAGKLMPQLYRQGLVPDVIV 394

Query: 170 SNP 172
            +P
Sbjct: 395 MDP 397


>gi|226942016|ref|YP_002797090.1| Cyclopropane-fatty-acyl-phospholipid synthase [Laribacter
           hongkongensis HLHK9]
 gi|226716943|gb|ACO76081.1| Cyclopropane-fatty-acyl-phospholipid synthase [Laribacter
           hongkongensis HLHK9]
          Length = 397

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 68/181 (37%), Gaps = 34/181 (18%)

Query: 52  HRILGWRDFYNVRLTLS---SDTFEPRPETELLVDSA---LAFSLPRIEKRDVVRILDLG 105
           H  LG  DFY + L  S   S  +  RP+   L ++    +  +L ++       +LD+G
Sbjct: 116 HYDLGN-DFYRLWLDDSMSYSCAYFARPD-MTLAEAQQAKIDHTLVKLALAPDECLLDIG 173

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGL 164
            G G + +   ++    +GVG+ +S +   +A+      G+++R +    DW     +  
Sbjct: 174 CGWGGLLIRAARQY-GVRGVGITLSEEQAALARERVAEAGLADRIEIRLQDWLDLEPQPE 232

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS    +            R F+                     VS  L   GL  
Sbjct: 233 FDKVVS----VGMFEHVGHQHSARFFE--------------------RVSHCLKPGGLML 268

Query: 225 V 225
           +
Sbjct: 269 L 269


>gi|26324958|dbj|BAC26233.1| unnamed protein product [Mus musculus]
          Length = 493

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 19/142 (13%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G      D   +++ +S D F    +        L   +  +   + 
Sbjct: 277 RCSHQQSPYQLLFGEPHIFEDLLGLKIRISPDAFF---QINTAGAEMLYRIIGELSGVNS 333

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             +L D+  GTG + L++ + +   +  G+++  +A+E A+  A  NGV+       R +
Sbjct: 334 ESLLLDICCGTGVIGLSVAQRA--SQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAE 391

Query: 152 TLQSDWF-SSVEGLFDVIVSNP 172
           T+      S  +    V V NP
Sbjct: 392 TILPQLLKSQKDEKLTVAVVNP 413


>gi|269784754|ref|NP_766128.2| tRNA (uracil-5-)-methyltransferase homolog isoform a [Mus musculus]
 gi|269784756|ref|NP_001161466.1| tRNA (uracil-5-)-methyltransferase homolog isoform a [Mus musculus]
 gi|81897080|sp|Q8BQJ6|TRM2_MOUSE RecName: Full=tRNA (uracil-5-)-methyltransferase homolog; AltName:
           Full=TRM2 homolog
 gi|26340260|dbj|BAC33793.1| unnamed protein product [Mus musculus]
 gi|34784571|gb|AAH56937.1| Trmt2b protein [Mus musculus]
 gi|123220830|emb|CAM15919.1| novel protein [Mus musculus]
          Length = 493

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 19/142 (13%)

Query: 45  SLKHE--SIHRILGW----RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
              H+      + G      D   +++ +S D F    +        L   +  +   + 
Sbjct: 277 RCSHQQSPYQLLFGEPHIFEDLLGLKIRISPDAFF---QINTAGAEMLYRIIGELSGVNS 333

Query: 99  VRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD 151
             +L D+  GTG + L++ + +   +  G+++  +A+E A+  A  NGV+       R +
Sbjct: 334 ESLLLDICCGTGVIGLSVAQRA--SQVHGIELVEQAVEDARWTAAFNGVTNCEFHAGRAE 391

Query: 152 TLQSDWF-SSVEGLFDVIVSNP 172
           T+      S  +    V V NP
Sbjct: 392 TILPQLLKSQKDEKLTVAVVNP 413


>gi|42525775|ref|NP_970873.1| UbiE/COQ5 family methlytransferase [Treponema denticola ATCC 35405]
 gi|41815786|gb|AAS10754.1| methlytransferase, UbiE/COQ5 family [Treponema denticola ATCC
           35405]
          Length = 250

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             ++     ++LD G GTG + + L ++   ++   +D S   LE  K  A   G+S++ 
Sbjct: 38  ENLKDCKGKKVLDAGCGTGFLAILLAQD--GWEVTAIDSSEAMLEEGKKTAEELGLSDKI 95

Query: 151 DTLQSDWFSS--VEGLFDVIVS 170
             L  D  S+   E LFD +VS
Sbjct: 96  TFLLKDAHSTDFPEHLFDAVVS 117


>gi|47217363|emb|CAG11068.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 876

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 19/170 (11%)

Query: 65  LTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               ++    R    +L D         ++ +  +     +LD+GTGTG +     K++ 
Sbjct: 156 FHRVANWLVERWHFFMLNDYGRNRKYQKAIQKAVQSGRTTVLDIGTGTGILG-MCAKKAG 214

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-----SVEGLFDVIVSNPPYI 175
             +    ++S    E+A      NG+      L            +      + S+   +
Sbjct: 215 AAEVYACELSKTMYELAGEVVAANGMDGDIKILHMKSLEMEVPKDIPQRAATVFSSNINV 274

Query: 176 ESVIVDCLGLEVRDFDPRISL------DGGIDGLSHYRTIADGVSRHLNK 219
           + +        V    PR+SL      D G+ G     ++       L  
Sbjct: 275 KGLKSSRFLKSVF---PRVSLVVTETVDAGLFGEGIVESLIHAWHHLLLP 321


>gi|326569390|gb|EGE19450.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis BC8]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                     NP   + +  + L   + DF P                        L   
Sbjct: 225 YRTQ------NPQLADVITANILAKPLIDFAPLF-------------------HDLLKTG 259

Query: 221 GLCSV 225
           GL  +
Sbjct: 260 GLIVL 264


>gi|317491408|ref|ZP_07949844.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316920955|gb|EFV42278.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 377

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
              F  V L +   +F    +T  LV ++L A +   + K ++  + DL  G G   L  
Sbjct: 195 EESFNQVPLYIRPQSFF---QTNPLVAASLYATARKWVHKLNISSMWDLFCGVGGFGLHC 251

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLF-DVIVSNPP 173
              +P  K  G++IS +A+  A  +A   G+   +F  L S  F+S EG   ++++ NPP
Sbjct: 252 A--TPEMKLTGIEISAEAIACATRSAQKIGLQNVQFSALDSTRFASAEGEVPELVLVNPP 309


>gi|238632116|gb|ACR50801.1| putative methyltransferase [Streptomyces longisporoflavus]
          Length = 249

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 49/149 (32%), Gaps = 36/149 (24%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D +L   L R       R LDLG G G   + L      F+   +D+S  A+   +  A 
Sbjct: 54  DESLVSYLDRGLVAPPGRALDLGCGPGRNAVQLAAA--GFEVDAIDLSPAAVAWGEERAR 111

Query: 143 TNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
             GV  RF   Q D F      VEG +D+I       +S     L               
Sbjct: 112 EAGVDVRFS--QGDAFDPDGPGVEGPYDLI------HDSGCFHHLPPH------------ 151

Query: 199 GIDGLSHYRTI--ADGVSRHLNKDGLCSV 225
                   R I     V R L   G  ++
Sbjct: 152 --------RRISYLALVERALAPGGHLAL 172


>gi|254169316|ref|ZP_04876147.1| tRNA methyltransferase complex GCD14 subunit superfamily
           [Aciduliprofundum boonei T469]
 gi|289595887|ref|YP_003482583.1| tRNA methyltransferase complex GCD14 subunit [Aciduliprofundum
           boonei T469]
 gi|197621737|gb|EDY34321.1| tRNA methyltransferase complex GCD14 subunit superfamily
           [Aciduliprofundum boonei T469]
 gi|289533674|gb|ADD08021.1| tRNA methyltransferase complex GCD14 subunit [Aciduliprofundum
           boonei T469]
          Length = 237

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 34/165 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNG 145
           A+ + R   R   R+++ G G+GA+ +ALL    P  K    ++      IAK N    G
Sbjct: 69  AYIIARCGIRSGWRVVEGGAGSGAMSIALLYYTYPDGKVYTYELRDDFAAIAKKNVENAG 128

Query: 146 VSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           +   +   + D    VE    D  + + P                 +P  +         
Sbjct: 129 LQAHWILKKGDIRKDVEERDVDAFILDIP-----------------EPWEA--------- 162

Query: 205 HYRTIADGVSRHLNKDGLCSVEIG-YNQKVDVVRIFESRKLFLVN 248
                 D   + L + G     I  YNQ   V R  +S     + 
Sbjct: 163 -----VDMAKKALRQSGCIMAYIPTYNQLERVYRKMKSVGFVDLE 202


>gi|171913066|ref|ZP_02928536.1| ribosomal protein L11 methyltransferase [Verrucomicrobium spinosum
           DSM 4136]
          Length = 282

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 7/96 (7%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +LVD A      + ++     +LDLGTG+G + +A  ++    +  G D   KA+ +A+
Sbjct: 130 RMLVDYA------KSKEGQPWTMLDLGTGSGVLAIA-AEKLGASEAWGCDFDDKAVRVAQ 182

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            N V N                    +D + +N  Y
Sbjct: 183 ENLVRNRTQNVVIEEADVLKWKPSRRWDCVAANLFY 218


>gi|156974107|ref|YP_001445014.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio harveyi ATCC
           BAA-1116]
 gi|156525701|gb|ABU70787.1| hypothetical protein VIBHAR_01818 [Vibrio harveyi ATCC BAA-1116]
          Length = 418

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 20/151 (13%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +     ++E +    ++++GTG GA+ + +  E    +     IS +    A+      G
Sbjct: 190 MDRLCQQLELKASDHVIEIGTGWGAMAIYMA-EQYGCQVTTTTISEEQHAYAEQKIKERG 248

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +  +   L+ D + +++G +D +VS    IE+V    L   ++  +    L  G  GL  
Sbjct: 249 LEGKVTLLKED-YRNLKGTYDKLVS-IEMIEAVGKQFLPSYIKKCESL--LKSG--GLMA 302

Query: 206 YRTI-------------ADGVSRHLNKDGLC 223
            + I              D + +++   G  
Sbjct: 303 IQAITIADQRYDYYSNNVDFIQKYIFPGGFL 333


>gi|326566695|gb|EGE16834.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           103P14B1]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPTEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 YRTQNPQLADVITAN 239


>gi|326561083|gb|EGE11448.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           7169]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 YRTQNPQLADVITAN 239


>gi|306833053|ref|ZP_07466184.1| O-methyltransferase [Streptococcus bovis ATCC 700338]
 gi|304424762|gb|EFM27897.1| O-methyltransferase [Streptococcus bovis ATCC 700338]
          Length = 233

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 3/104 (2%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + F  +    ++    +A+    ++      IL++GT  G   L + + +P  K   +D 
Sbjct: 41  EAFAHQENIPIIQHEVVAYFRFLMQTLQPKNILEIGTAIGFSALLMAENAPDAKITTLDR 100

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVS 170
           + + +  AK N       ++   L+ D     S++EG FD +  
Sbjct: 101 NPEMIAFAKENFAKYDTRKQITLLEGDAVDTLSTLEGEFDFVFM 144


>gi|222479168|ref|YP_002565405.1| protein of unknown function Met10 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222452070|gb|ACM56335.1| protein of unknown function Met10 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 329

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 14/130 (10%)

Query: 57  WRDFYN-VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
            R++ +   L ++   F PR         A        +      ++D+  G G   + +
Sbjct: 143 HREYGHEFLLDVAEVYFSPR--------LATERHRVIEQVDPDEAVIDMFAGVGPYAVPM 194

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNP 172
                  + V  D++ +A+E  + NA  NGV++R   +  D      +     D +V N 
Sbjct: 195 AAR--GAEVVACDLNERAVEYLRENAERNGVADRVTAIAGDVRGIADAYADTADRLVMNL 252

Query: 173 PYIESVIVDC 182
           P+     ++ 
Sbjct: 253 PHSADEFLET 262


>gi|154498551|ref|ZP_02036929.1| hypothetical protein BACCAP_02541 [Bacteroides capillosus ATCC
           29799]
 gi|150272290|gb|EDM99484.1| hypothetical protein BACCAP_02541 [Bacteroides capillosus ATCC
           29799]
          Length = 271

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 43/186 (23%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--- 137
           L    +      IE  +    LD+G G+GA+ +A  K +P  + VG  I    +E A   
Sbjct: 87  LSRQIIEGIAAYIELPEGGVGLDVGCGSGALTIACAKRNPSGRMVG--IDRWGVEYASYS 144

Query: 138 ----KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
               + NA   GVS      Q D       +  FD + SN  Y      D          
Sbjct: 145 RKLCERNARAEGVS-NITFRQGDARHLDFPDETFDAVTSNYVYHNITGADK--------- 194

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLF 245
                          +T+     R L + G+ ++         Y    + +R        
Sbjct: 195 ---------------QTLLRESLRVLKRGGVFAI-HDLMEPSRYGDMDEFLRKLREDGFQ 238

Query: 246 LVNAFK 251
                 
Sbjct: 239 EAQLLP 244


>gi|308798929|ref|XP_003074244.1| RNA methyltransferase family protein (ISS) [Ostreococcus tauri]
 gi|116000416|emb|CAL50096.1| RNA methyltransferase family protein (ISS) [Ostreococcus tauri]
          Length = 1009

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 61  YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           + V+  LSS +F      +   LV   +A      ++ +   +LDL  G G + L++   
Sbjct: 807 HGVKFELSSASFFQTNTEQAARLVREVVAGCGFAGDRSET--VLDLFCGVGTMGLSVASN 864

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
           +   + +G ++  +A+E A+ NA  NG++   D  + D 
Sbjct: 865 AK--RVIGWEVVPEAVEDARRNAEINGIT-NADFYRVDL 900


>gi|315586855|gb|ADU41236.1| adenine specific DNA methyltransferase [Helicobacter pylori 35A]
          Length = 386

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L        K++   +L+   G G      LK   
Sbjct: 6   YQLDIKTLGQVFTPKN----IVDFMLTL------KQNQGSVLEPSAGDGR----FLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
             K VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   
Sbjct: 52  --KVVGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSAKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|225568062|ref|ZP_03777087.1| hypothetical protein CLOHYLEM_04135 [Clostridium hylemonae DSM
           15053]
 gi|225163158|gb|EEG75777.1| hypothetical protein CLOHYLEM_04135 [Clostridium hylemonae DSM
           15053]
          Length = 189

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 38/159 (23%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++      P +        LDL  G+G + +         + V V+ + KA+
Sbjct: 22  RPTTDRIKETLFNMISPYLYD---CIFLDLFAGSGGIGIE-ALSRGAMEAVFVEKNPKAM 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
              K N     +S R  T+ +D  +++     +  FD I  +PPY               
Sbjct: 78  ACVKENLRRTKLSHRAATMSTDVMTALYKLEGDKQFDFIFMDPPY--------------- 122

Query: 190 FDPRISLDGGIDGLSHYRTIADGVS--RHLNKDGLCSVE 226
                       GL   R + + ++    L  +G+  VE
Sbjct: 123 ------------GLQLERKVLEYLAESELLADEGVIIVE 149


>gi|170681470|ref|YP_001742967.1| 23S rRNA methyluridine methyltransferase [Escherichia coli SMS-3-5]
 gi|226725408|sp|B1LN12|RUMB_ECOSM RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|170519188|gb|ACB17366.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           SMS-3-5]
          Length = 375

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVNHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DIQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|167835667|ref|ZP_02462550.1| cyclopropane fatty acid synthase family protein [Burkholderia
           thailandensis MSMB43]
          Length = 406

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I  +   R+LD+G G GA+ L    +    + VGV +S    E+A       G
Sbjct: 158 IDHILTKIGVQPGQRLLDIGCGWGALVLRAAGKF-GARCVGVTLSQNQFELATERVKRAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R +    D +  ++G FD I S
Sbjct: 217 LEDRIEIRLQD-YREIDGQFDRITS 240


>gi|187736305|ref|YP_001878417.1| PUA domain containing protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426357|gb|ACD05636.1| PUA domain containing protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 433

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LDL   +G   +A        +   VD+  KA+ +AK N   N   +R D + +D
Sbjct: 259 KGATVLDLCCYSGGFSIAAKMLGGAAEVTAVDLDEKAVAMAKRNGNIN--RQRIDFVHAD 316

Query: 157 WFSSVEGL------FDVIVSNPP 173
            F     +      FD ++ +PP
Sbjct: 317 AFVYARQMVRNGRLFDAVLLDPP 339


>gi|113866085|ref|YP_724574.1| SAM-dependent methyltransferase [Ralstonia eutropha H16]
 gi|113524861|emb|CAJ91206.1| SAM-dependent methyltransferase [Ralstonia eutropha H16]
          Length = 296

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 9/97 (9%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKA 133
           RP    LVD+          K     +LD+G GTG+  +AL ++     +  G+DIS   
Sbjct: 38  RPLEGRLVDTV--------GKTSAQHVLDVGCGTGSTTIALARKLGAQGRCTGIDISEPM 89

Query: 134 LEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           L  A++ A  NG +  F    +  ++     FD IVS
Sbjct: 90  LAAARARAQHNGSTASFIRADAQDYAFAPASFDSIVS 126


>gi|154248646|ref|YP_001419604.1| cyclopropane-fatty-acyl-phospholipid synthase [Xanthobacter
           autotrophicus Py2]
 gi|154162731|gb|ABS69947.1| Cyclopropane-fatty-acyl-phospholipid synthase [Xanthobacter
           autotrophicus Py2]
          Length = 409

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 43/85 (50%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
                 +++    +R+ ++G+G G + + + KE    +   +++S + L  ++  A   G
Sbjct: 163 FRHIAAKLKIAPGMRVAEIGSGWGGLAIYMAKEC-GAQVTAINVSPEQLAESRRLAEAAG 221

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           V+   D  + D + +++G FD +VS
Sbjct: 222 VAGSIDFREVD-YRNLKGKFDRVVS 245


>gi|302544811|ref|ZP_07297153.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462429|gb|EFL25522.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 438

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 70/190 (36%), Gaps = 35/190 (18%)

Query: 42  IVRSLKHESIHRILGWRDFYNVRL---TLSSDTFEPRPETELLVDSA----LAFSLPRIE 94
           + R  +  S H  +G  DFY + L    + S  +  RP+T L  + A    L     ++ 
Sbjct: 146 LRRDKQAISHHYDVGN-DFYELVLGPSMVYSCAYWERPDTTL--EEAQRAKLDLVCRKLA 202

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                R+LD+G G G++ L   +E    + VG+ +S +    A+      G+++  +   
Sbjct: 203 LEPGQRLLDVGCGWGSMVLHAAREY-GVRAVGITLSEEQASYARKRIADAGLTDEIEIRV 261

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVS 214
            D+    +G +D I S       + +      VR  +              Y  I     
Sbjct: 262 QDYREIDDGPYDAISS-------IGMAEHVGSVRYAE--------------YTGIL---H 297

Query: 215 RHLNKDGLCS 224
           R L   G   
Sbjct: 298 RLLAPGGRLL 307


>gi|255319487|ref|ZP_05360701.1| ribosomal protein L11 methyltransferase [Acinetobacter
           radioresistens SK82]
 gi|262378489|ref|ZP_06071646.1| ribosomal protein L11 methyltransferase [Acinetobacter
           radioresistens SH164]
 gi|255303427|gb|EET82630.1| ribosomal protein L11 methyltransferase [Acinetobacter
           radioresistens SK82]
 gi|262299774|gb|EEY87686.1| ribosomal protein L11 methyltransferase [Acinetobacter
           radioresistens SH164]
          Length = 300

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 67/167 (40%), Gaps = 30/167 (17%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELL---VDSALAF----------SLPRIEKRDV 98
           W D+Y       +  +  +  EP PE   +   +D  LAF           L  + K D+
Sbjct: 100 WMDYYEPIQIGEKFWIVPEWLEP-PEAGAVNIKLDPGLAFGTGNHASTFLCLQWLGKTDL 158

Query: 99  V--RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               ++D G G+G + +A L      +    DI  +A+   + NA  N V ER      +
Sbjct: 159 KDKVVIDYGCGSGILGVAALLLGAK-QVYATDIDPQAVLATQQNAELNSVLERLYVGLPE 217

Query: 157 WFSSV--EGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
            F++V      DV+V+N   I +  +  L  E   +   +   +L G
Sbjct: 218 EFNTVFKGQQADVLVAN---ILAGPLMALASEFSTLIKSEGEFALAG 261


>gi|225713660|gb|ACO12676.1| Methyltransferase-like protein 5 [Lepeophtheirus salmonis]
          Length = 210

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P +  +    L  +           I DLG+G G + +            G ++   A +
Sbjct: 27  PTSPHIASRILYTAESTFNDIAGRSIADLGSGCGMLSIGAAL-MDAASVTGFELDPSAAQ 85

Query: 136 IAKSNAVTNGVSERFDTLQSD---WFSSV--EGLFDVIVSNPPY 174
           +A  N     +    D +  D    F ++  +  FD ++ NPP+
Sbjct: 86  VALDNLEGFELETPVDFVLIDITQLFENLPEKKRFDTVIMNPPF 129


>gi|115400383|ref|XP_001215780.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191446|gb|EAU33146.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 173

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 94  EKRDVVRIL-DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
              D   +L D   G G   +A  +   + +   ++ +   L  AK NA   GV+++   
Sbjct: 4   SAPDGRSVLIDAFAGAGGNAIAFARSGKWKRIYAIEKNPSVLLCAKHNAKIYGVADKITW 63

Query: 153 LQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            + D F  ++        + V+ ++PP+            +R  +P
Sbjct: 64  FEGDCFEIIKNQLKDLAPYSVVFASPPWGGPGYRSDKIFNLRTMEP 109


>gi|45358870|ref|NP_988427.1| methyltransferase-like protein [Methanococcus maripaludis S2]
 gi|45047736|emb|CAF30863.1| methyltransferase related protein [Methanococcus maripaludis S2]
          Length = 380

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 23/125 (18%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   ++LD+ + TG    A+       +   VD+S KAL +A+ N   N V   ++ + S
Sbjct: 206 KPGDKVLDICSYTG--GFAVHAGIKGGEVTAVDLSEKALAVAEENMELNRVK-NYNCMVS 262

Query: 156 DWFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID----GLSH 205
           + F +++        FDV+V +PP       D           + +L+        GL  
Sbjct: 263 NAFDAMKEMIKNNEKFDVVVLDPPAFTDSSKDI----------KNALNAYNSMNYLGLKL 312

Query: 206 YRTIA 210
            + I 
Sbjct: 313 AKRIL 317


>gi|330961629|gb|EGH61889.1| methyltransferase [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 374

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 22/129 (17%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-AVTNGVSERFDTLQSD 156
             R+ DLG G G + +A   ++P      VD S  A++ A  N     G  +        
Sbjct: 232 TARVADLGCGNGVLAIASALDNPQAHYTLVDESFMAVQSAAENWRAAFGERDAVIRAADG 291

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                    DV++ NPP+ +  +V                     G      +       
Sbjct: 292 LEGQEPDSLDVVLCNPPFHQQQVV---------------------GDFLAWRMFLQARAA 330

Query: 217 LNKDGLCSV 225
           L   G   +
Sbjct: 331 LVTGGALYI 339


>gi|325108529|ref|YP_004269597.1| methyltransferase small [Planctomyces brasiliensis DSM 5305]
 gi|324968797|gb|ADY59575.1| methyltransferase small [Planctomyces brasiliensis DSM 5305]
          Length = 227

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P           +A  +   E     R+L+LG G+G + LA L           D   
Sbjct: 51  YVPYWGYLWPAARCMAQRVAAAEWPKQTRVLELGCGSGLIGLAALAA--GMHVTFSDNRP 108

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +AL+++  NA  NG  E FD    DW   
Sbjct: 109 EALQLSGYNAEQNGF-ENFDVALLDWLKP 136


>gi|299065664|emb|CBJ36837.1| Ribosomal protein L11 methyltransferase [Ralstonia solanacearum
           CMR15]
          Length = 298

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 5/86 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         +   R LD G G+G + + + K+    + VGVDI   A+E ++ NA  N 
Sbjct: 154 LCMEWLEQHVQPGERTLDYGCGSGILAI-VAKKLGTGETVGVDIDPNAVEASRYNAERNR 212

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           V   F         + EG FD++V+N
Sbjct: 213 VEAGFSLPD----DAPEGTFDLVVAN 234


>gi|297699610|ref|XP_002826874.1| PREDICTED: putative methyltransferase METT10D-like, partial [Pongo
           abelii]
          Length = 606

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 105 REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QESDKSTLRRGIDIGTGASCIYP 162

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 163 LLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 222

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 223 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 282

Query: 214 SRHLN 218
            + L 
Sbjct: 283 KKRLR 287


>gi|261867310|ref|YP_003255232.1| 23S rRNA 5-methyluridine methyltransferase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412642|gb|ACX82013.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 438

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 11/131 (8%)

Query: 51  IHRILGWRDFYNVR--LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           I    G + FY +   LTL  D  +       L    +  +L  +   +   +LDL  G 
Sbjct: 244 IEHWHGEQPFYRLDNDLTLQFDIRDFIQINAELNRQMINTALDWLALNEREHVLDLFCGM 303

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------E 162
           G   L + +      G+        +E A+ NA  N         Q+D   S       +
Sbjct: 304 GNFTLPIARRVKSAVGIEGV--SAMVEKARRNAERNRC-HNVQFYQADLDKSFVNQGWAQ 360

Query: 163 GLFDVIVSNPP 173
             F+ I+ +PP
Sbjct: 361 QPFNKILLDPP 371


>gi|261381312|ref|ZP_05985885.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703]
 gi|284795802|gb|EFC51149.1| ribosomal protein L11 methyltransferase [Neisseria subflava NJ9703]
          Length = 295

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A LK       +GVDI  +A+  +K NA  N V  +F     
Sbjct: 162 KGGESVLDYGCGSGILAIAALKLGAGS-AIGVDIDEQAIRASKDNAAQNNVDAQFYLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|217034347|ref|ZP_03439763.1| hypothetical protein HP9810_491g40 [Helicobacter pylori 98-10]
 gi|216943232|gb|EEC22699.1| hypothetical protein HP9810_491g40 [Helicobacter pylori 98-10]
          Length = 389

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 27/142 (19%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  +L ++  +   ++LD+G G G + +   +E    + +G+ IS +  + A       G
Sbjct: 150 LDHTLKKLHLKPGEKLLDIGCGWGYLSIKAAQEY-GAQVMGITISSEQYKQANKRVQELG 208

Query: 146 VSERFDT--LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           + ++     L           FD +VS                V  F+  +    G D L
Sbjct: 209 LEDKVTIKLLNYQDLDGRLYRFDKVVS----------------VGMFE-HV----GKDNL 247

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
             Y      V   L + G+  +
Sbjct: 248 PFY---FKKVKEVLKRGGMFLL 266


>gi|308800752|ref|XP_003075157.1| Methyltransferase small (ISS) [Ostreococcus tauri]
 gi|116061711|emb|CAL52429.1| Methyltransferase small (ISS) [Ostreococcus tauri]
          Length = 303

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 21/191 (10%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGT-GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           A A S  + ++ + +RI DLG G+ GAV LA             ++   ++E  +     
Sbjct: 70  AHASSTTKTDEYERLRIADLGAGSSGAVGLAYALAREASVVALFELQSSSVERLRRTIEA 129

Query: 144 N-----GVSERFDTLQSDW-----FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           N      V    + +++D           G FDV+++NPPY +      L    R  + R
Sbjct: 130 NRRAIEKVGLDVEVIEADCGDLGEAEGFRGAFDVVLTNPPYFDES-KGTLAG--RSEERR 186

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNK-DGLCSVEIGYNQKVDVVRIFESRKLFLVNA--F 250
           I        L             L +  G   V   + Q+  + R         V     
Sbjct: 187 IGRFESTASLED---FCTFAKTMLKEDGGEFHVVYPFFQRERLERAMVDV-FCNVRVAAC 242

Query: 251 KDYGGNDRVLL 261
            DY G DR  L
Sbjct: 243 YDYPGADRASL 253


>gi|119719469|ref|YP_919964.1| putative RNA methylase [Thermofilum pendens Hrk 5]
 gi|119524589|gb|ABL77961.1| putative RNA methylase [Thermofilum pendens Hrk 5]
          Length = 336

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 29/182 (15%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           F  R     L+  AL  ++     R    + D   G+G + L  L+  P+ + V  D++ 
Sbjct: 166 FIHRSALNPLIAYALCRAV-----RGGKSLWDPFCGSGTIPLECLEVYPWARAVCSDVNA 220

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV--EGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           + +  A  N  +  V +  D + SD  S+    G  D +V+NPP+               
Sbjct: 221 EFIAGALQN--SLAVGKELDLVVSDIRSAPLRSGSIDAVVTNPPFGIREKA--------- 269

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
                   GG+     Y  +    SR L + G  +V      +  V  + +      V  
Sbjct: 270 -------VGGL--RKVYEALFTEASRVLVQGGRLAVLTP--HRKLVESLAQKHSFLKVGE 318

Query: 250 FK 251
           ++
Sbjct: 319 WR 320


>gi|116629813|ref|YP_814985.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323]
 gi|282851681|ref|ZP_06261046.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1]
 gi|116095395|gb|ABJ60547.1| N6-adenine-specific methylase [Lactobacillus gasseri ATCC 33323]
 gi|282557649|gb|EFB63246.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 224-1]
          Length = 182

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  ++LDL  G+GA+ +       +   V VDIS +A +I + N       +RF  L+  
Sbjct: 41  DGGQVLDLYAGSGALGIE-AVSRGYDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCS 99

Query: 157 ------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
                   +  E  FD+I  +PPY +  IV  +   +++
Sbjct: 100 DNRAIKILNEEEKKFDLIFLDPPYAKQKIVKIMTKLLKN 138


>gi|296112846|ref|YP_003626784.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis RH4]
 gi|295920540|gb|ADG60891.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis RH4]
          Length = 310

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 YRTQNPQLADVITAN 239


>gi|91786999|ref|YP_547951.1| ribosomal protein L11 methyltransferase [Polaromonas sp. JS666]
 gi|122968112|sp|Q12EI9|PRMA_POLSJ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|91696224|gb|ABE43053.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Polaromonas sp. JS666]
          Length = 298

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +      + + R+LD G G+G + +   K         VDI   A+E  ++NA  N V  
Sbjct: 160 AGQGAANKPLARVLDYGCGSGILAIGAAK-FGAVDIDAVDIDEAAVESTRANAEANHV-- 216

Query: 149 RFDTLQSDWFSSVEGLFDVIVSN 171
              TL +       G +  +++N
Sbjct: 217 ---TLNAGLPDKAVGAYQTVLAN 236


>gi|52841423|ref|YP_095222.1| hypothetical protein lpg1190 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148358776|ref|YP_001249983.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby]
 gi|52628534|gb|AAU27275.1| SAM-dependent methyltransferase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|148280549|gb|ABQ54637.1| hypothetical protein LPC_0657 [Legionella pneumophila str. Corby]
          Length = 390

 Score = 55.9 bits (134), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 21/129 (16%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LDL T TG   L   K         VD S +A+E AK+NAV N +    + +++D 
Sbjct: 221 GKRVLDLYTFTGGFALHAAKAGA-LHVTAVDSSVQAIEQAKNNAVLNHL-NTIEFIKADA 278

Query: 158 FSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
              ++  G +DV++ +PP +            +++               YR +     +
Sbjct: 279 REYLKMAGEYDVVILDPPKLVPSQKHLQQ--AKNY---------------YRFLHREAFK 321

Query: 216 HLNKDGLCS 224
           ++    L  
Sbjct: 322 YMKPGSLLM 330


>gi|331007465|ref|ZP_08330638.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium IMCC1989]
 gi|330418722|gb|EGG93215.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium IMCC1989]
          Length = 430

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 8/124 (6%)

Query: 52  HRILGWRDFYNVRLTLS---SDTFEPRPETELLVDSA--LAFSLPRIEKRDVVRILDLGT 106
           H  LG  DF+N+ L  S   S    P  +  L V +   L     R++  +   +L++GT
Sbjct: 148 HYDLGN-DFFNLFLDKSMMYSSAIYPTVDASLEVAATYKLEHICQRLQLTENDHLLEIGT 206

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G + +    +    +     IS +  E A++  V  G+ ++   L +D +  +EG FD
Sbjct: 207 GWGGMAIYAATQY-GCRVTTTTISKEQYEHARAEVVAAGLEDKVTLLLND-YRDLEGQFD 264

Query: 167 VIVS 170
            +VS
Sbjct: 265 KLVS 268


>gi|326922768|ref|XP_003207617.1| PREDICTED: methyltransferase-like protein 5-like isoform 2
           [Meleagris gallopavo]
          Length = 229

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 68  SSDTFEPRPETE-LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S      +  T   +    L       +  +   + DLG G G + +            G
Sbjct: 21  SPKVLLEQYPTRPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGLCV-G 79

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
            DI  +ALEI  SN     ++   D +Q D      S+   FD ++ NPP+
Sbjct: 80  FDIDAEALEIFNSNLEDFELT-NVDVVQCDVSSLPDSMSETFDTVIMNPPF 129


>gi|326922766|ref|XP_003207616.1| PREDICTED: methyltransferase-like protein 5-like isoform 1
           [Meleagris gallopavo]
          Length = 212

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 68  SSDTFEPRPETE-LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S      +  T   +    L       +  +   + DLG G G + +            G
Sbjct: 21  SPKVLLEQYPTRPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGLCV-G 79

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
            DI  +ALEI  SN     ++   D +Q D      S+   FD ++ NPP+
Sbjct: 80  FDIDAEALEIFNSNLEDFELT-NVDVVQCDVSSLPDSMSETFDTVIMNPPF 129


>gi|324993324|gb|EGC25244.1| O-methyltransferase [Streptococcus sanguinis SK405]
          Length = 227

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQVTL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAMDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|118093593|ref|XP_001233695.1| PREDICTED: similar to DC3 [Gallus gallus]
          Length = 212

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 6/111 (5%)

Query: 68  SSDTFEPRPETE-LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVG 126
           S      +  T   +    L       +  +   + DLG G G + +            G
Sbjct: 21  SPKVLLEQYPTRPHIAACMLYTIHNTFDDIENKTVADLGCGCGMLSIGSAMLGAGLCV-G 79

Query: 127 VDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
            DI  +ALEI  SN     ++   D +Q D      S+   FD ++ NPP+
Sbjct: 80  FDIDAEALEIFNSNLEDFELT-NVDVVQCDVSSLPDSMSETFDTVIMNPPF 129


>gi|86355770|ref|YP_467662.1| rRNA (guanine-N2-)-methyltransferase, small subunit protein
           [Rhizobium etli CFN 42]
 gi|86279872|gb|ABC88935.1| probable rRNA (guanine-N2-)-methyltransferase, small subunit
           protein [Rhizobium etli CFN 42]
          Length = 338

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 45/120 (37%), Gaps = 2/120 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF-FKGVGVDISCKALEIAKSN 140
           +D+       R+ +     + D G G G + + + + S    +    + +  ALE A+ N
Sbjct: 179 IDAGSELLATRLPQDFSGDVADFGAGWGYLSVEMAQRSRGLARLDLYEANHAALEAARDN 238

Query: 141 AVTNGVSERFDTLQSDW-FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N           D     V+  +D++V NPP+ E    +    +        +L GG
Sbjct: 239 LAENCPDAPVRFFWHDLVGEPVKDKYDLVVMNPPFHEGHAAEPSLGQAMIKAAASALRGG 298


>gi|45655997|ref|YP_000083.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|51316692|sp|Q72W54|Y086_LEPIC RecName: Full=Uncharacterized RNA methyltransferase LIC_10086
 gi|45599230|gb|AAS68720.1| RNA methyltransferase [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 415

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+   L      +      RIL+L  G+G + +AL  ++  +  +G +IS   ++ AK N
Sbjct: 253 LIAPWLEKIFELVPNNQN-RILELYCGSGLIAIALKSKTTSW--LGYEISSDCVQQAKRN 309

Query: 141 AVTNGVSER-FDT--LQSDWFSSVEGLF-DVIVSNPP 173
            + NG+S   F T  L++DW  S E L     + NPP
Sbjct: 310 VLLNGISSCDFKTLNLETDWIDSEEVLNSSFWIMNPP 346


>gi|24212798|ref|NP_710279.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar
           Lai str. 56601]
 gi|50401585|sp|Q8F9U1|Y098_LEPIN RecName: Full=Uncharacterized RNA methyltransferase LA_0098
 gi|24193445|gb|AAN47297.1| tRNA (uracil-5-)-methyltransferase [Leptospira interrogans serovar
           Lai str. 56601]
          Length = 415

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L+   L      +      RIL+L  G+G + +AL  ++  +  +G +IS   ++ AK N
Sbjct: 253 LIAPWLEKIFELVPNNQN-RILELYCGSGLIAIALKSKTTSW--LGYEISSDCVQQAKRN 309

Query: 141 AVTNGVSER-FDT--LQSDWFSSVEGLF-DVIVSNPP 173
            + NG+S   F T  L++DW  S E L     + NPP
Sbjct: 310 VLLNGISSCDFKTLNLETDWIDSEEVLNSSFWIMNPP 346


>gi|294506164|ref|YP_003570222.1| RNA methylase family UPF0020 [Salinibacter ruber M8]
 gi|294342492|emb|CBH23270.1| Putative RNA methylase family UPF0020 [Salinibacter ruber M8]
          Length = 247

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
              +   L   +      ++DLG+G G + +A   +    +G+GV+I  + +  A+ NA 
Sbjct: 86  QRVVNRMLEAAQVTSDDVVIDLGSGDGRIPIA-AAQRHGARGIGVEIDPELIAKARENAE 144

Query: 143 TNGVSERFDTLQSDWFSS 160
             GVS+  +  Q D F +
Sbjct: 145 AAGVSDLVEFRQGDLFEA 162


>gi|253995527|ref|YP_003047591.1| 50S ribosomal protein L11 methyltransferase [Methylotenera mobilis
           JLW8]
 gi|253982206|gb|ACT47064.1| ribosomal protein L11 methyltransferase [Methylotenera mobilis
           JLW8]
          Length = 298

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD G G+G + +A  K+    + VG DI  +A++ +  NA  N V   F     D
Sbjct: 163 PGNSVLDYGCGSGILAIA-AKKLGAAEVVGTDIDTQAIQSSLYNAEQNQVEAEF----YD 217

Query: 157 WFSSVEGLFDVIVSN 171
             +     FD++V+N
Sbjct: 218 ANAYQSKEFDIVVAN 232


>gi|52841834|ref|YP_095633.1| hypothetical protein lpg1606 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628945|gb|AAU27686.1| hypothetical protein lpg1606 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 219

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGV 127
            D +    ++  L     A  L        +R+LDL  G G + + L        +   +
Sbjct: 20  PDDYHFSLDSIHLAKFV-AKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFI 78

Query: 128 DISCKALEIAKSNAV---TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESV 178
           +I     E    N        +  R+  L  D       E  FD+I+SNPPY +  
Sbjct: 79  EIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPG 134


>gi|145219574|ref|YP_001130283.1| putative methyltransferase [Prosthecochloris vibrioformis DSM 265]
 gi|145205738|gb|ABP36781.1| putative methyltransferase [Chlorobium phaeovibrioides DSM 265]
          Length = 188

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 38/185 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  +L  +L      +  ++LDL  G G++               VD   ++L   +  A
Sbjct: 28  VKKSLFDTLLHRFTFEEAKVLDLFAGFGSLGFE-ALSRGAASVTFVDRHPESLRSLRETA 86

Query: 142 VTNGVSERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
               + ++   +  D  + +    G  D++  +PPY      + L   + D         
Sbjct: 87  RELALEDQVSIIDEDVPAFLCRYSGEADLVFCDPPY-SWQDYNGLIESIMD--------- 136

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
             DG              L++DG   +E              +   +     KDY G  R
Sbjct: 137 -EDG--------------LSEDGFLLIEHSARLG------LTASPYY--RFHKDY-GMTR 172

Query: 259 VLLFC 263
           V  F 
Sbjct: 173 VTFFQ 177


>gi|306843587|ref|ZP_07476188.1| methyltransferase small [Brucella sp. BO1]
 gi|306276278|gb|EFM57978.1| methyltransferase small [Brucella sp. BO1]
          Length = 340

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 48/146 (32%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D   A     +EK     + DLG G G +    LK +   K     +   +ALE A  N
Sbjct: 181 IDKGSALLARHMEKIVFGNVADLGAGWGYLAAQCLKYADRIKNIDLYEADYEALEAAHGN 240

Query: 141 AVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
               G S        D  S  + G++D ++ NPP+ E  + D                  
Sbjct: 241 LERLGASIPISFNWFDVTSEKIAGIYDTVIMNPPFHEGRVTDVSLG-------------- 286

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  ++     +  L   G   V
Sbjct: 287 -------QSFIAAAASRLKPGGRLLV 305


>gi|291460187|ref|ZP_06599577.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291417134|gb|EFE90853.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 602

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +R  +S  +F      +   +      L          + DL  G G + L L   +  
Sbjct: 326 GIRFRISPLSFYQVNPVQT--ERIYETVLEFSALSGTENVFDLYCGIGTISLLLSAAAG- 382

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDT------LQSDWFSSVEG-LFDVIVSNPP 173
            +  G++I   A+  A+ NA  NG+   +        L   W +   G   D++  +PP
Sbjct: 383 -RVYGIEIIPDAVRDARENAERNGIENAYFFTGAAEELLPRWHAEHPGERIDLVCVDPP 440


>gi|217967528|ref|YP_002353034.1| methyltransferase [Dictyoglomus turgidum DSM 6724]
 gi|217336627|gb|ACK42420.1| methyltransferase [Dictyoglomus turgidum DSM 6724]
          Length = 185

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 31/132 (23%)

Query: 102 LDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL  G+G V + A+   +     V   I   A+++ + N    G+ E+   +  D F  
Sbjct: 50  LDLFAGSGIVGIEAISYGAEKSVFVENHIH--AVKLLRENLKNLGIQEKTKVIYKDVFEF 107

Query: 161 V----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +    E  +D+I ++PPY  S  +  +   V ++                          
Sbjct: 108 LNKTPEEKYDIIFADPPYELSEKILNVVEYVNNY------------------------NW 143

Query: 217 LNKDGLCSVEIG 228
           L  DG+  +E  
Sbjct: 144 LKIDGILIIEHH 155


>gi|15611913|ref|NP_223564.1| type II DNA modification (methyltransferase [Helicobacter pylori
           J99]
 gi|4155416|gb|AAD06424.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
           pylori J99]
          Length = 381

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 58/171 (33%), Gaps = 37/171 (21%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y + +      F P+     +VD  L      I K +   +L+   G G    + LK   
Sbjct: 6   YQLEIKTLGQVFTPKN----IVDFML------ILKHNHGSVLEPSAGDG----SFLKRLK 51

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVI 179
               VG++I  K       NA           L  D+F   +E  F+ I+ NPPY++   
Sbjct: 52  KA--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFNTIIGNPPYVKHKD 95

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
           +     E   +    SL      L  Y    +   +HL   G        +
Sbjct: 96  IAPSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|33865682|ref|NP_897241.1| hypothetical protein SYNW1148 [Synechococcus sp. WH 8102]
 gi|33632852|emb|CAE07663.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 222

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 2/88 (2%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            AL  S       D   ILDLG G G + L L K  P  + +GVD S   L++A+  A  
Sbjct: 36  EALLSSASGRAASDPAVILDLGCGPGNISLPLAKRFPESQVIGVDGSRAMLQVARDRANQ 95

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            G+S   D   S          D+IVSN
Sbjct: 96  QGLS--IDLRCSTLQDLALEPVDLIVSN 121


>gi|291556131|emb|CBL33248.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum
           V10Sc8a]
          Length = 493

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  S     +     +LDL  G G + L++ + +   K +GV+I  +A+E AK NA+ NG
Sbjct: 290 LYSSACDFAEPKGKTVLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIENAKQNALANG 347

Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPP 173
           ++   + + +D   +           DVI+ +PP
Sbjct: 348 IT-NCEFICADAAEAARILHSRSLRPDVIMVDPP 380


>gi|291544856|emb|CBL17965.1| RNA methyltransferase, RsmD family [Ruminococcus sp. 18P13]
          Length = 180

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 37/177 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G       RL       + RP T+ + ++  +    ++      ++LDL  G+G + +
Sbjct: 4   ITGSA--RGRRLRTLEG-MDVRPTTDKVKEAMFSAIQFQL---PGAQVLDLFAGSGQLGI 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL---QSDWFSSVEGLFDVIVS 170
                     GV VD S +++ + + N  T G ++    +   Q D+  + +  FD+   
Sbjct: 58  E-ALSRGAAHGVFVDQSSRSIAVVRENLETTGFTDVSAVVLKSQMDFLRTTDQRFDIAFL 116

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +PPY + ++ + L +                           +S ++N  G+   E+
Sbjct: 117 DPPYGKGILEETLPV---------------------------LSEYMNPGGIVICEM 146


>gi|291531341|emb|CBK96926.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Eubacterium siraeum
           70/3]
          Length = 449

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  S     +     +LDL  G G + L++ + +   K +GV+I  +A+E AK NA+ NG
Sbjct: 290 LYSSACDFAEPKGKTVLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIENAKQNALANG 347

Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPP 173
           ++   + + +D   +           DVI+ +PP
Sbjct: 348 IT-NCEFICADAAEAARILHSRNLRPDVIMVDPP 380


>gi|258546162|ref|ZP_05706396.1| type 11 methyltransferase [Cardiobacterium hominis ATCC 15826]
 gi|258518587|gb|EEV87446.1| type 11 methyltransferase [Cardiobacterium hominis ATCC 15826]
          Length = 200

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 32/170 (18%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A  L R++     RIL++G G G    AL +  P  + V  DI  + L IA+       +
Sbjct: 40  AELLRRLQPTADSRILEVGCGPGYFSPALARAVPQGELVLADIQPEMLAIARRRLEKRHI 99

Query: 147 SER-FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +           F   +  FD IV          +      +R+F               
Sbjct: 100 TNTSCQLCNGSSFPFADNSFDRIVLV---CVLGEIAERSAYLREF--------------- 141

Query: 206 YRTIADGVSRHLNKDGLCSV-EIGYN----QKVDVVRIFESRKLFLVNAF 250
                   +R L  DGL S+ E   +     + +++ +  +     V  +
Sbjct: 142 --------ARLLKDDGLLSISETAGDPDKLDQQELIALLATHGFTPVRQY 183


>gi|229198240|ref|ZP_04324948.1| Biotin biosynthesis protein BioC [Bacillus cereus m1293]
 gi|228585259|gb|EEK43369.1| Biotin biosynthesis protein BioC [Bacillus cereus m1293]
          Length = 257

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 35/143 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R      +RIL+LG GTG V   L    P  +   +D +   + +A  + N   
Sbjct: 21  LSTLNRRYSANSSIRILELGCGTGYVTEQLSNLFPKAQITAIDFAESMIAVARTRQNI-- 78

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                       D     +E  +DVI+SN  +                            
Sbjct: 79  ----NNVTFYCEDIERLRLEETYDVIISNATF--------------------------QW 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           L+  + +   + RHL+ +G+   
Sbjct: 109 LNDLKQVIRNLFRHLSIEGILLF 131


>gi|213962453|ref|ZP_03390715.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Capnocytophaga sputigena Capno]
 gi|213954779|gb|EEB66099.1| ubiquinone/menaquinone biosynthesis methyltransferase UbiE
           [Capnocytophaga sputigena Capno]
          Length = 244

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 52/141 (36%), Gaps = 29/141 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            F + ++ + +   +LD+ TGTG + +AL    P  K  G+DIS   L + +       +
Sbjct: 48  KFVVQKVAEINPSTVLDVATGTGDLAIAL-TTIPEVKITGLDISEGMLAVGREKIAKKQL 106

Query: 147 SERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           S R + +Q D       +  FD +              +G  VR+F+             
Sbjct: 107 SNRINLVQGDSEELPFADATFDAV-------------TVGFGVRNFE------------- 140

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
                   + R L  +G   V
Sbjct: 141 DLEKGLSEIFRVLKPNGRLVV 161


>gi|167750197|ref|ZP_02422324.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702]
 gi|167656759|gb|EDS00889.1| hypothetical protein EUBSIR_01171 [Eubacterium siraeum DSM 15702]
          Length = 493

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  S     +     +LDL  G G + L++ + +   K +GV+I  +A+E AK NA+ NG
Sbjct: 290 LYSSACDFAEPKGKTVLDLYCGAGTIGLSMARTAK--KIIGVEIVPEAIENAKQNALANG 347

Query: 146 VSERFDTLQSDWFSSVEG------LFDVIVSNPP 173
           ++   + + +D   +           DVI+ +PP
Sbjct: 348 IT-NCEFICADAAEAARILHSRNLRPDVIMVDPP 380


>gi|34763572|ref|ZP_00144507.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|237742322|ref|ZP_04572803.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256845601|ref|ZP_05551059.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294785110|ref|ZP_06750398.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27]
 gi|27886761|gb|EAA23899.1| METHYLTRANSFERASE [Fusobacterium nucleatum subsp. vincentii ATCC
           49256]
 gi|229429970|gb|EEO40182.1| methyltransferase [Fusobacterium sp. 4_1_13]
 gi|256719160|gb|EEU32715.1| RsmD family RNA methyltransferase [Fusobacterium sp. 3_1_36A2]
 gi|294486824|gb|EFG34186.1| RNA methyltransferase, RsmD family [Fusobacterium sp. 3_1_27]
          Length = 182

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 46/191 (24%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILD 103
           R +  E+ +RI+  R  ++ R TL S           + +S  +   P IE       LD
Sbjct: 2   RIIAGEAKNRIIKTRKGFDTRPTLES-----------VKESLFSIIAPYIEGS---VFLD 47

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE- 162
           L +G+G++ L         + V ++   +AL+    N    G S+R    ++D   ++E 
Sbjct: 48  LFSGSGSISLE-AISRGAKRAVMIEKDGEALKYIIENIDNLGFSDRCRAYKNDVIRAIEI 106

Query: 163 -----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                  FD+I  +PPY ++V    L                         + D     L
Sbjct: 107 LGRKNEKFDIIFMDPPYQDNVTKKVL------------------------KVIDKA-NIL 141

Query: 218 NKDGLCSVEIG 228
            +DGL   E  
Sbjct: 142 AEDGLIICEHH 152


>gi|326565377|gb|EGE15555.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           12P80B1]
          Length = 310

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 26/125 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
                     NP   + +  + L   + DF P                        L   
Sbjct: 225 HRTQ------NPQLADVITANILAKPLIDFAPLF-------------------HDLLKTG 259

Query: 221 GLCSV 225
           GL  +
Sbjct: 260 GLIVL 264


>gi|292655627|ref|YP_003535524.1| putative DNA methylase [Haloferax volcanii DS2]
 gi|291370592|gb|ADE02819.1| predicted DNA methylase [Haloferax volcanii DS2]
          Length = 208

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LDLG+GTG + L     SP  + VGV++   AL  A  NA   G S   D +++D
Sbjct: 48  EGATVLDLGSGTGMLGLGAALRSP-ARVVGVELDDDALATATDNARRVGASAPIDWIRAD 106

Query: 157 WFSSVEGLFD----VIVSNPPY 174
                  L D     ++ NPP+
Sbjct: 107 ATRLPLCLPDDRQVTVLMNPPF 128


>gi|170761794|ref|YP_001787475.1| type I restriction-modification system, M subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408783|gb|ACA57194.1| type I restriction-modification system, M subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 511

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 17/160 (10%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P+  +++L        L  + K+D+  + D   G+G++ L + KE+      G +++ 
Sbjct: 201 YTPQQVSKILA------KLVTVGKKDLKSVYDPACGSGSLLLRVSKEANVRYFYGQELTS 254

Query: 132 KALEIAKSNAVTNGVS-ERFDTLQSDWFSS---VEGLFDVIVSNPPYIESVIVDC--LGL 185
               +A+ N + + +S ERFD    D   +   ++  FD +V+NPPY      D   L  
Sbjct: 255 TTYNLARMNMLLHDISYERFDIRNDDTLENPEHIDMKFDAVVANPPYSAKWSADNKFLDD 314

Query: 186 EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           E      +++     D  +  + +       LN  G  +V
Sbjct: 315 ERFSAYGKLAPKSKAD-YAFVQHMIYQ----LNDGGTMAV 349


>gi|326567542|gb|EGE17657.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis BC1]
          Length = 310

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 HRTQNPQLADVITAN 239


>gi|330934993|ref|XP_003304787.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1]
 gi|311318443|gb|EFQ87106.1| hypothetical protein PTT_17463 [Pyrenophora teres f. teres 0-1]
          Length = 240

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 14/148 (9%)

Query: 58  RDFYNVRLTLSSDTFEPRPE---------TELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           + +++ R  +  + ++             T   + + +A  +     ++   I+D   G 
Sbjct: 24  KKYWHQRFKI-WEQYDKGIWMTEDAWFGVTPEPIANKIAAHISESAPKEKTVIIDAFAGV 82

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV---EGLF 165
           G   +AL +   + +   ++   K L  AK NA   GVS +   L  D F  +    G  
Sbjct: 83  GGNSIALARSGRWERVFAIEKDPKTLMCAKHNAEIYGVSSKIFWLSGDCFDVISRFSGQS 142

Query: 166 DVIV-SNPPYIESVIVDCLGLEVRDFDP 192
           +V+V ++PP+  +        ++   +P
Sbjct: 143 NVVVFASPPWGGTEYGAEGVFDLTKMEP 170


>gi|310827304|ref|YP_003959661.1| hypothetical protein ELI_1712 [Eubacterium limosum KIST612]
 gi|308739038|gb|ADO36698.1| hypothetical protein ELI_1712 [Eubacterium limosum KIST612]
          Length = 206

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 31/144 (21%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V       + R+   +   ILDLG G G + +A L++       G+DIS   +  A+   
Sbjct: 31  VQCMYDTIVNRVLDLNPKTILDLGCGNGNI-IARLQKRLNADYYGLDISEAMIAQAEKRL 89

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
               ++  F    ++     +  FD IV N  +                 P         
Sbjct: 90  ----LNVHFMVGDAEKLPYEDNKFDAIVCNASF--------------HHYPH-------- 123

Query: 202 GLSHYRTIADGVSRHLNKDGLCSV 225
                + +   + R L KDG   +
Sbjct: 124 ----PKAVIREIQRVLKKDGTLIL 143


>gi|260893435|ref|YP_003239532.1| tRNA (adenine-N(1)-)-methyltransferase [Ammonifex degensii KC4]
 gi|260865576|gb|ACX52682.1| tRNA (adenine-N(1)-)-methyltransferase [Ammonifex degensii KC4]
          Length = 263

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVT- 143
           +A  L   +     R+L  G G+GA+ +A+L++  P  + V  D+    L  A+ N    
Sbjct: 84  VAIILVWADIFPGARVLCGGVGSGALLIAILRQVGPTGRVVAYDVREDMLAWAEQNVKNF 143

Query: 144 NGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLD 197
            G     +    D +  +    FD ++ + P                 +P  +LD
Sbjct: 144 LGELSGLELKLGDIYEPIPEKDFDRVLLDVP-----------------EPWRALD 181


>gi|288930472|ref|YP_003434532.1| hypothetical protein Ferp_0067 [Ferroglobus placidus DSM 10642]
 gi|288892720|gb|ADC64257.1| protein of unknown function Met10 [Ferroglobus placidus DSM 10642]
          Length = 277

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R+  R+L +  G G   + + + S   + +G++++  A+E  K N   N V      ++ 
Sbjct: 119 REGERVLVMYAGVGPYAIVIARLSKPREVIGIELNPVAVEYFKKNVKLNKVEGIVKVIEG 178

Query: 156 DWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           D       +EG+FD +V   PY     +  L  ++++
Sbjct: 179 DVRDVVPKLEGVFDRVVMPAPYHAEDHIYLLEGKLKE 215


>gi|194443652|ref|YP_002040122.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|226725413|sp|B4T0E3|RUMB_SALNS RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|194402315|gb|ACF62537.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
          Length = 376

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F+  +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|209155002|gb|ACI33733.1| TPR repeat-containing protein LOC90826 [Salmo salar]
          Length = 872

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 23/159 (14%)

Query: 65  LTLSSDTFEPRPETELLVD----SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
               ++    R    +L D         ++ +  +     +LD+GTGTG +     K++ 
Sbjct: 144 FYRVANWLVERWHFLMLNDRRRNHKYQQAIQKAVEGGCNTVLDIGTGTGILG-MCAKKAG 202

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIV 180
             +    ++S    E+A      NG++ R   L               +  P  I   + 
Sbjct: 203 ASEVSACELSKTMYELACEVVTANGMNGRIKILHMKSLE---------MEVPKDIPKRVS 253

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
             +   V         D G+ G     ++    +  L  
Sbjct: 254 LVVTETV---------DAGLFGEGIIESLIHAWNHLLLP 283


>gi|240848853|ref|NP_001155764.1| methyltransferase-like protein 5-like [Acyrthosiphon pisum]
 gi|239788973|dbj|BAH71137.1| ACYPI008499 [Acyrthosiphon pisum]
          Length = 217

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 101 ILDLGTGTG--AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
           + DLG G+G   +  ALL         G DI   A+ ++  NA    VS + D +  D  
Sbjct: 55  VADLGCGSGVLCIGAALLGAQYCA---GFDIDPSAISLSVENAADRDVSGQCDFILCDVK 111

Query: 159 SSVEGL----FDVIVSNPPY 174
              + +    FD ++ NPP+
Sbjct: 112 KIDKNMQLKAFDTVIMNPPF 131


>gi|327400909|ref|YP_004341748.1| hypothetical protein Arcve_1022 [Archaeoglobus veneficus SNP6]
 gi|327316417|gb|AEA47033.1| protein of unknown function Met10 [Archaeoglobus veneficus SNP6]
          Length = 277

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 4/97 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +   R+L +  G G   + + K +   + VGV+++  A+E  + N   N V E       
Sbjct: 119 KPGERVLVMFAGVGPFAIVIAKLAKPSEVVGVELNPAAVEYFRRNVELNKV-ENVKVYGG 177

Query: 156 DWFS---SVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           D       +EG FD ++   P I    VD   ++V++
Sbjct: 178 DVREIVPKLEGGFDRVLMPSPQIAESFVDVAAMKVKE 214


>gi|331662271|ref|ZP_08363194.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA143]
 gi|331060693|gb|EGI32657.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA143]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|260772620|ref|ZP_05881536.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio metschnikovii
           CIP 69.14]
 gi|260611759|gb|EEX36962.1| cyclopropane-fatty-acyl-phospholipid synthase [Vibrio metschnikovii
           CIP 69.14]
          Length = 412

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 39  TNAIVRSLKHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVD-SALAFSLPRIE 94
            N++ ++ ++   H  LG   ++ F + R+  SS  +    ++      + +     +++
Sbjct: 132 RNSLGQAKQNIEAHYDLGNDLYQTFLDKRMLYSSALYLNSTDSLEQAQLNKMERLCQQLQ 191

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            +    +L++GTG GA+ + + +     K     IS +     ++   + G++++   L+
Sbjct: 192 LQASDHVLEIGTGWGAMAIYMAQTY-GCKVTTTTISEEQFAYTQALVESLGLTDQITLLK 250

Query: 155 SDWFSSVEGLFDVIVS 170
            D +  + G FD +VS
Sbjct: 251 QD-YRQLTGQFDKLVS 265


>gi|296812885|ref|XP_002846780.1| WW domain-containing protein [Arthroderma otae CBS 113480]
 gi|238842036|gb|EEQ31698.1| WW domain-containing protein [Arthroderma otae CBS 113480]
          Length = 238

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + +        ++D   G G   +A  K + + +   ++   + L  A
Sbjct: 52  TPEPVANKIALHMAQAAPETKCILIDTFAGAGGNTIAFAKSNRWKRVYAIEKDPETLRCA 111

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV ++      D F  ++        + VI  +PP+            +   +
Sbjct: 112 KHNAELYGVGDKITWFLGDCFEILQNQLKDLAPYSVIFGSPPWGGPGYRSDAIFNLSTME 171

Query: 192 P 192
           P
Sbjct: 172 P 172


>gi|209364159|ref|YP_001425062.2| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           Dugway 5J108-111]
 gi|207082092|gb|ABS77540.2| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii Dugway
           5J108-111]
          Length = 243

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 28/145 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L++      + +        +LD+G G G +  AL K        GVD+S   +++AK++
Sbjct: 44  LINPVRLKYIEQQITLKGKHVLDVGCGGGLLSEALAKH--GAIVTGVDMSESLIDVAKNH 101

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A    ++  +     +  +     FD+I                +E+ +  P        
Sbjct: 102 AEQQQLNINYQCQDIEILTKDAQRFDIITC--------------MELLEHVP-------- 139

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 + +    +  +   G    
Sbjct: 140 ----DPQRMIKNCAALIKPGGKLFF 160


>gi|13476507|ref|NP_108077.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium loti
           MAFF303099]
 gi|14027268|dbj|BAB54222.1| cyclopropane-fatty-acyl-phospholipid synthase [Mesorhizobium loti
           MAFF303099]
          Length = 430

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 26/138 (18%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +    +LD+G+G G + L L K        GV +S +   +A   A   G+ 
Sbjct: 165 HIAAKLRLKAGQTVLDIGSGWGGLGLYLAKAF-DVDVQGVTLSTEQHGVATDRAHAQGLE 223

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                   D +  +   FD IVS                V  F+          G++H+R
Sbjct: 224 SHVHFELKD-YRELNERFDRIVS----------------VGMFE--------HVGVNHFR 258

Query: 208 TIADGVSRHLNKDGLCSV 225
           T  D  +  L  DG+  +
Sbjct: 259 TFFDKAATLLKPDGVMLL 276


>gi|307245100|ref|ZP_07527193.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254055|ref|ZP_07535902.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258511|ref|ZP_07540248.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853989|gb|EFM86201.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862980|gb|EFM94927.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867415|gb|EFM99266.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 234

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ K        G+D++ + L++
Sbjct: 28  PIHLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMAKA--GANVTGIDMTTEPLDV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  +G++        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|303249556|ref|ZP_07335763.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307251817|ref|ZP_07533719.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|302651630|gb|EFL81779.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306860724|gb|EFM92735.1| 3-demethylubiquinone-9 3-methyltransferase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 234

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    L +   +       ++LD+G G G +  A+ K        G+D++ + L++
Sbjct: 28  PIHLLNPLRLDYIQQKSNGLFGKKVLDVGCGGGILSEAMAKA--GANVTGIDMTTEPLDV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           A+ +A  +G++        +    +  +     FDVI                +E+ +  
Sbjct: 86  ARKHAEESGLTIDYRQTTIEDFVQNQTACHAEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|256005601|ref|ZP_05430560.1| biotin biosynthesis protein BioC [Clostridium thermocellum DSM
           2360]
 gi|255990436|gb|EEU00559.1| biotin biosynthesis protein BioC [Clostridium thermocellum DSM
           2360]
 gi|316941212|gb|ADU75246.1| biotin biosynthesis protein BioC [Clostridium thermocellum DSM
           1313]
          Length = 283

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 5/80 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ ++ + ILD+G GTG +   LL   P  +   +DI+   +E A+            + 
Sbjct: 38  LDSKNRLDILDVGCGTGYLTKLLLDRWPDARITAIDIAPGMIEYAR----DRFNESNVEF 93

Query: 153 LQSDWFSS-VEGLFDVIVSN 171
              D   + +   +D+++SN
Sbjct: 94  ACLDIEEAELNQKYDLVISN 113


>gi|120611480|ref|YP_971158.1| type 11 methyltransferase [Acidovorax citrulli AAC00-1]
 gi|120589944|gb|ABM33384.1| Methyltransferase type 11 [Acidovorax citrulli AAC00-1]
          Length = 236

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 8/129 (6%)

Query: 44  RSLKHESIHRILGWRDFYNVRLTLSSDTFEP-RPETELLVDSALAFSLPRIEKRDVVRIL 102
           R               F ++ + L+    E  R    +L     A  L  ++ +   R+L
Sbjct: 45  RREDFVPPAY--RGMAFMDMEIPLNPSAEEAQRLGQCMLAPRVEARLLQDLQVKPTDRVL 102

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-- 160
           ++G G+G +   L   +     V ++I    +E A+ N ++ G+ +     Q D      
Sbjct: 103 EIGAGSGYMAALLAHRAE--HVVTLEIVPDLVEFARENLLSAGI-DNVAVRQGDGARDAI 159

Query: 161 VEGLFDVIV 169
            +G FDVIV
Sbjct: 160 PDGPFDVIV 168


>gi|126178841|ref|YP_001046806.1| methyltransferase type 11 [Methanoculleus marisnigri JR1]
 gi|125861635|gb|ABN56824.1| Methyltransferase type 11 [Methanoculleus marisnigri JR1]
          Length = 267

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 34/136 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               R+L+ G GTGA  + L + SP  +   VDIS  +L  AK      G++        
Sbjct: 35  PAGSRVLEAGCGTGAQTVILARNSPEARITSVDISEVSLGEAKKRVEIEGIT-NVTFEAG 93

Query: 156 DWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF--DPRISLDGGIDGLSHYRTIAD 211
           D F      G FD I                  V +   +P  +L              +
Sbjct: 94  DIFDLRYEPGSFDHIFLCF--------------VLEHLAEPHRAL--------------E 125

Query: 212 GVSRHLNKDGLC-SVE 226
            +   L + G    +E
Sbjct: 126 QLRPLLREGGTITVIE 141


>gi|313906027|ref|ZP_07839380.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6]
 gi|313469140|gb|EFR64489.1| RNA cap guanine-N2 methyltransferase [Eubacterium cellulosolvens 6]
          Length = 426

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TG+  L           + VD S  A+E A+ NA  NG+ +R D   +D
Sbjct: 248 KGAEVLDCFTHTGSFGLNAAL-GGASHVISVDASELAIEQARKNAELNGLQDRIDYQCAD 306

Query: 157 WFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDF 190
            F  +  L      FDV++ +PP   +     +   VR +
Sbjct: 307 VFELLPNLERQGRSFDVVILDPPAF-TKSRASIKAAVRGY 345


>gi|315050298|ref|XP_003174523.1| N(5)-glutamine methyltransferase MTQ2 [Arthroderma gypseum CBS
           118893]
 gi|311339838|gb|EFQ99040.1| N(5)-glutamine methyltransferase MTQ2 [Arthroderma gypseum CBS
           118893]
          Length = 283

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 47/183 (25%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG------VGVDISCKALEIAKS---- 139
           LP         I+++GTG+G +   L        G      +G D++  A    +     
Sbjct: 54  LPTSASSPSPVIVEVGTGSGVILGFLAANCKTIIGRSDILTIGTDVNRNACSATRQTVKV 113

Query: 140 ---------------------NAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIES 177
                                N   +   +    +  D  SS+  G+ D+++ NPPY+ +
Sbjct: 114 AIADKYAEESFGAAPANKQEANTKASTPIQPLAVITGDLCSSLRPGMVDILLFNPPYVPT 173

Query: 178 VIVDCLGL--------------EVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD-GL 222
             +  L                E+  +   ++  GG  G+     + D + + LN + G+
Sbjct: 174 PELPHLPSPSEATSSTSGMSRFEMESYLLSLTYAGGEHGMETTNRLLDSIPQILNPERGV 233

Query: 223 CSV 225
             V
Sbjct: 234 AYV 236


>gi|291522115|emb|CBK80408.1| SAM-dependent methyltransferase [Coprococcus catus GD/7]
          Length = 400

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD  T TG+  L     +   +  GVD S  A+  A+ NA  N + +      +D 
Sbjct: 223 GARVLDCFTHTGSFALN-AGIAGAAEVTGVDASELAVHQAEENAALNQLQDTVHFQCADV 281

Query: 158 FSSVE------GLFDVIVSNPP 173
           F+ +         +DV++ +PP
Sbjct: 282 FNLLPELEKQGEKYDVVILDPP 303


>gi|227821407|ref|YP_002825377.1| cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium fredii
           NGR234]
 gi|227340406|gb|ACP24624.1| cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium fredii
           NGR234]
          Length = 418

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 28/137 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++L++G+G G + + L  E+   +  G+ +S + L +++  A   G+S+R      
Sbjct: 172 EPGQQVLEVGSGWGGLAMYLA-EATGVEVTGITLSEEQLRVSRERAARRGLSDRVRFELQ 230

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVS 214
           D+ +     FD IVS                V  F+      G G  G + +R I     
Sbjct: 231 DYRTLQGRQFDRIVS----------------VGMFE----HVGIGNYG-NFFRKI----K 265

Query: 215 RHLNKDGLCSVEIGYNQ 231
             L  DG+  +     Q
Sbjct: 266 ELLRPDGVMLL-HSIGQ 281


>gi|227511020|ref|ZP_03941069.1| methyltransferase family protein [Lactobacillus buchneri ATCC
           11577]
 gi|227085762|gb|EEI21074.1| methyltransferase family protein [Lactobacillus buchneri ATCC
           11577]
          Length = 241

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 32/150 (21%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES-PFFKGVGVDI------SCKALEIA 137
                L + +  D    LDLG G GAV +AL K   PF K VGVD+      S  +LE  
Sbjct: 66  IWDKILAKTDISDDATALDLGCGHGAVLIALSKLLGPFGKAVGVDLWKNADQSHNSLEET 125

Query: 138 KSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           K N     V++  + + +D       +  FD++ S      S     +    + F+   +
Sbjct: 126 KRNLEIAKVADHTELVTADMAKLPFEDDRFDLVTS------SFAFHNIKPNKKRFE---A 176

Query: 196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           L                  R L   G   +
Sbjct: 177 L--------------SEAHRVLKPGGKLII 192


>gi|194433128|ref|ZP_03065410.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella dysenteriae
           1012]
 gi|194418625|gb|EDX34712.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella dysenteriae
           1012]
 gi|320177807|gb|EFW52793.1| 23S rRNA methyluridine methyltransferase [Shigella boydii ATCC
           9905]
 gi|332088882|gb|EGI93994.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella boydii
           5216-82]
 gi|332091027|gb|EGI96117.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella dysenteriae
           155-74]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|134034817|gb|ABO45734.1| microcystin synthetase N-methyltranserase domain [Microcystis
           botrys N-C 161/1]
          Length = 497

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 84/257 (32%), Gaps = 56/257 (21%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVAPHC 158

Query: 120 PFFKGVGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPYI 175
             +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N    
Sbjct: 159 QHY--WGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN---- 211

Query: 176 ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDV 235
                      V  + P I          +   + +G  + L   G   +        DV
Sbjct: 212 ----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GDV 245

Query: 236 VRI-FESRKLFLVNAFK 251
             +         V  +K
Sbjct: 246 RNLQLMEAFHADVELYK 262


>gi|218532821|ref|YP_002423637.1| ribosomal L11 methyltransferase [Methylobacterium chloromethanicum
           CM4]
 gi|254563839|ref|YP_003070934.1| ribosomal protein L11 methyltransferase [Methylobacterium
           extorquens DM4]
 gi|218525124|gb|ACK85709.1| ribosomal L11 methyltransferase [Methylobacterium chloromethanicum
           CM4]
 gi|254271117|emb|CAX27124.1| Ribosomal protein L11 methyltransferase (L11 Mtase)
           [Methylobacterium extorquens DM4]
          Length = 305

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +  +++R    +LD+GTGTG +  A  K       V  D+  +A+  A+ NA  NG
Sbjct: 146 LRALVDELKRRRPAHVLDVGTGTGILGFAAAKVLRTP-VVAGDLDPEAVTTARGNARLNG 204

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
           +        +       ++    FDV+ +N
Sbjct: 205 LGPFMRFYHAPGVRHALANRPRGFDVVFAN 234


>gi|156059348|ref|XP_001595597.1| hypothetical protein SS1G_03686 [Sclerotinia sclerotiorum 1980]
 gi|154701473|gb|EDO01212.1| hypothetical protein SS1G_03686 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 305

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 72/234 (30%), Gaps = 67/234 (28%)

Query: 56  GWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           G R F       +  T+ P P  + L  +     +  +      ++LD G G G V + L
Sbjct: 39  GTRHFG---FYPAGTTW-PFPIRKAL-HAMEDHLIANLGLGSGSKVLDAGCGVGHVAMHL 93

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
            K +  F    +D+    L  A+ N   +G+  +    + D+    +  +G FD +    
Sbjct: 94  AK-TAGFNIHAIDVVDHHLMKARRNVKADGLEGQITISKEDYHHLDAFKDGEFDGV---- 148

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-E----- 226
            Y     V  +  EV   +               R         L   G  ++ E     
Sbjct: 149 -YTMETFVHAVEPEVAAKE-------------FLRI--------LRPGGKLAMYEYDHVD 186

Query: 227 -------IG-----------------YNQKVDVVRIFESRKLFLVNAFKDYGGN 256
                  IG                 +NQ V + +I E      V   KD   N
Sbjct: 187 FTTQTKDIGASFTSINTHAAMPAHERFNQGV-LEKILEEVGFEDV-VVKDLSDN 238


>gi|311033111|ref|ZP_07711201.1| Type I restriction-modification system methyltransferase subunit
           [Bacillus sp. m3-13]
          Length = 538

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 18/109 (16%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPF------FKGVGVDISCKALEIAKSNAVTNGVS-- 147
            D  R+ D   G+G++ L + KE P        +  G +++     +A+ N + +GV+  
Sbjct: 214 GDQFRVYDPTMGSGSLLLTVQKELPNGDKEGSVEFYGQELNTTTYNLARMNLMMHGVNYR 273

Query: 148 ----ERFDTLQSDW-FSSVEG-----LFDVIVSNPPYIESVIVDCLGLE 186
               +R DTL +DW F+  +G      FD +VSNPPY ++     +  E
Sbjct: 274 NMELKRADTLDADWPFAEKDGTQIPLKFDAVVSNPPYSQNWDTKDVDRE 322


>gi|289548934|ref|YP_003473922.1| methyltransferase small [Thermocrinis albus DSM 14484]
 gi|289182551|gb|ADC89795.1| methyltransferase small [Thermocrinis albus DSM 14484]
          Length = 238

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 34/201 (16%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
           +PR     +++      L  I++     ++DLG G GA+ +           + V+    
Sbjct: 18  QPRRHRLSIIEILFVAHLRGIKRTST--VVDLGAGFGALSVLTALRY-SCHVLAVERDSL 74

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIESVIVDCLGLEVR 188
            LE+ + N   N + ++   ++ D             D ++ NPP+              
Sbjct: 75  MLELLRYNVKVNQLQDKVSVVEGDVRDVEHFLKRYTADAVIVNPPFYP------------ 122

Query: 189 DFDPRISLDGGIDGLSH------YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESR 242
                 +  G  DG  H              S  L   G  ++ I   + ++ V   +  
Sbjct: 123 ------AHWGSKDGGYHFEMDTKLEDFIKASSYLLKDGGHLNILIPSFRFLEAVENMKRY 176

Query: 243 KLFLVNA---FKDYGGNDRVL 260
            +  V+    +     N R++
Sbjct: 177 NIAPVHVMFFYPKLSKNARLV 197


>gi|149639520|ref|XP_001514825.1| PREDICTED: similar to DC3 [Ornithorhynchus anatinus]
          Length = 209

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   + DLG G G + +            G DI   ALEI   N   
Sbjct: 38  CMLYTIHNTYDDIEDKVVADLGCGCGVLSIGSAMLGAGLCV-GFDIDEDALEIFSRNVEE 96

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +QS+       +   FD ++ NPP+
Sbjct: 97  FELT-NIDMIQSNVCSLPDRMSKSFDTVIMNPPF 129


>gi|87118650|ref|ZP_01074549.1| 23S rRNA (uracil-5-)-methyltransferase [Marinomonas sp. MED121]
 gi|86166284|gb|EAQ67550.1| 23S rRNA (uracil-5-)-methyltransferase [Marinomonas sp. MED121]
          Length = 441

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            +A +L  +   +  ++LDL  G G   LA+ K +   K VGV++  + +  A+ NA  N
Sbjct: 283 MVAQALQWLALSEQDKVLDLFCGAGNFSLAMAKTAE--KVVGVEVQAQMVRNAERNAERN 340

Query: 145 GVSERFDTLQSDWF-----SSVEGLFDVIVSNPP 173
           G+      + +D        +++  F   + +PP
Sbjct: 341 GLK-NVTFIGADLTKTVRNEALKKGFSKALLDPP 373


>gi|326575307|gb|EGE25235.1| ribosomal protein L11 methyltransferase [Moraxella catarrhalis
           CO72]
          Length = 310

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A        + + VDI  +A+   + NA  NGV +R        F +
Sbjct: 166 VIDYGCGSGILGVA-ALLLGARQVLAVDIDPQAVLATRQNAALNGVDDRLLAFLPAEFDA 224

Query: 161 V----EGLFDVIVSN 171
                  L DVI +N
Sbjct: 225 HRTQNPQLADVITAN 239


>gi|261339168|ref|ZP_05967026.1| hypothetical protein ENTCAN_05391 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319012|gb|EFC57950.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Enterobacter
           cancerogenus ATCC 35316]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
              L    F  V L +   +F     T   V SAL A +   +   ++  + DL  G G 
Sbjct: 191 QHALAET-FNGVPLWIRPQSFFQTNPT---VASALYATARDWVRALNIGHMWDLFCGVGG 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVI 168
             L     +P  +  G++IS +A+  A  +A   G++   F  L S  F++ +G   +++
Sbjct: 247 FGLHCA--TPEMQLTGIEISAEAIACATQSAAELGLTNLHFQALDSTQFATGQGNVPELV 304

Query: 169 VSNPP 173
           + NPP
Sbjct: 305 LVNPP 309


>gi|188596504|pdb|3D2L|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase
           (Zp_00538691.1) From Exiguobacterium Sp. 255-15 At 1.90
           A Resolution
 gi|188596505|pdb|3D2L|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase
           (Zp_00538691.1) From Exiguobacterium Sp. 255-15 At 1.90
           A Resolution
 gi|188596506|pdb|3D2L|C Chain C, Crystal Structure Of Sam-Dependent Methyltransferase
           (Zp_00538691.1) From Exiguobacterium Sp. 255-15 At 1.90
           A Resolution
 gi|188596507|pdb|3D2L|D Chain D, Crystal Structure Of Sam-Dependent Methyltransferase
           (Zp_00538691.1) From Exiguobacterium Sp. 255-15 At 1.90
           A Resolution
          Length = 243

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 45/153 (29%), Gaps = 35/153 (22%)

Query: 73  EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK 132
            P PE    V   L    P        RI D+G GTG   L L       +  GVD+S +
Sbjct: 18  VPYPE---WVAWVLEQVEP------GKRIADIGCGTGTATLLLADHY---EVTGVDLSEE 65

Query: 133 ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
            LEIA+  A        F          +    D I      I    ++ L  E      
Sbjct: 66  XLEIAQEKAXETNRHVDFWVQDXRELE-LPEPVDAIT-----ILCDSLNYLQTE------ 113

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                      +  +   D  +R L   G    
Sbjct: 114 -----------ADVKQTFDSAARLLTDGGKLLF 135


>gi|197265862|ref|ZP_03165936.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|197244117|gb|EDY26737.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + L  R F +V L +   +F     T  +     A +   + +  V  + DL  G G  
Sbjct: 191 QQALAER-FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGF 247

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIV 169
            L     +P  +  G++I+ +A+  AK +A   G++   F  L S  F++ +G   D+++
Sbjct: 248 GLHCA--TPQMQLTGIEIAPEAIACAKQSATELGLTRLHFQALDSTQFATAQGETPDLVL 305

Query: 170 SNPP 173
            NPP
Sbjct: 306 VNPP 309


>gi|154496753|ref|ZP_02035449.1| hypothetical protein BACCAP_01046 [Bacteroides capillosus ATCC
           29799]
 gi|150274005|gb|EDN01105.1| hypothetical protein BACCAP_01046 [Bacteroides capillosus ATCC
           29799]
          Length = 215

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 14/151 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF--DTL 153
           +   R+ DLG G G + L LL         GV+IS  A  +A+ N   NG+S       L
Sbjct: 35  KPGWRVCDLGCGPGTLLLLLLGRVSTLTVCGVEISPIAAAVARRNLSDNGLSGEIITGDL 94

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           +        G +D++VSNPP+         G E    + R +L            +    
Sbjct: 95  KDIASLPTAGQWDLVVSNPPWFPDGSGRSGGPE--RMEERCTL----------EQLCAAA 142

Query: 214 SRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +R L   G  ++    ++  D++    +  L
Sbjct: 143 ARCLKNGGRFALVHRPDRLTDLLCALRAAGL 173


>gi|118590877|ref|ZP_01548277.1| SAM (and some other nucleotide) binding motif protein [Stappia
           aggregata IAM 12614]
 gi|118436399|gb|EAV43040.1| SAM (and some other nucleotide) binding motif protein [Stappia
           aggregata IAM 12614]
          Length = 296

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R+   ILDLGTGTG + +A   +S     +  DI   A + A  NA  NG
Sbjct: 140 LEEIDRLLAMREYHSILDLGTGTGVLAIAAALQSRQS-VLATDIDPVATKTALENARLNG 198

Query: 146 VSERFDTLQSDWFSS----VEGLFDVIVSN 171
                    ++          G FD++++N
Sbjct: 199 AGHLVKGFTANGIDDRRFRHYGPFDLVIAN 228


>gi|320175299|gb|EFW50405.1| 23S rRNA methyluridine methyltransferase [Shigella dysenteriae CDC
           74-1112]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|331656932|ref|ZP_08357894.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA206]
 gi|331055180|gb|EGI27189.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA206]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|288554996|ref|YP_003426931.1| RNA methyltransferase [Bacillus pseudofirmus OF4]
 gi|288546156|gb|ADC50039.1| RNA methyltransferase, TrmA family [Bacillus pseudofirmus OF4]
          Length = 459

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R  +S+ +F      +T++L D AL ++    + +    ++D   G G + L L +++
Sbjct: 277 DIRFAISARSFYQVNPDQTKVLYDKALEYA----DLKGDETVIDAYCGIGTISLFLAQKA 332

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPP 173
                 GV+I  +A+  AK NA  NG +   D    +      W+ +     DVIV +PP
Sbjct: 333 K--HVYGVEIVPEAISDAKKNAEINGFT-NVDFAVGEAENVMPWWYAQGIRPDVIVVDPP 389


>gi|222032588|emb|CAP75327.1| 23S rRNA [Escherichia coli LF82]
 gi|312945376|gb|ADR26203.1| 23S rRNA methyluridine methyltransferase [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|212224096|ref|YP_002307332.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009053|gb|ACJ16435.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
          Length = 419

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 5/90 (5%)

Query: 85  ALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           ALA  L  +E   D  R+LDL +G G   + L K    F   GV+++  A+E+A+ NA  
Sbjct: 267 ALALLLKTVEGFADGERVLDLYSGVGTFGVWLAKR--GFAVEGVELNPFAVEMARKNAEL 324

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           NGV   F   +++   +  G +D ++ +PP
Sbjct: 325 NGVDVVFKVGRAE--ETSIGDYDTVIVDPP 352


>gi|209524061|ref|ZP_03272612.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
 gi|209495436|gb|EDZ95740.1| Methyltransferase type 11 [Arthrospira maxima CS-328]
          Length = 203

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 43/171 (25%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           W  FY+  L            T +   +     L   E  +   ILD+G GTG +   L 
Sbjct: 16  WAPFYDFLL------------TTVFYQAVHKRLLEFAEFPNSANILDIGCGTGRLLQRLA 63

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPY 174
           K+ P  +G G+D+S + ++ AK+    N   +R   LQ +       E  FD +      
Sbjct: 64  KQFPDLQGTGLDLSPQMIKEAKN---QNVYGDRLQFLQGNVEALPFPESSFDAVFC---- 116

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                +     E                      +   + R L   G+  +
Sbjct: 117 -TISFLHYPHPEF---------------------VLAEIKRVLRSQGVFYL 145


>gi|163788804|ref|ZP_02183249.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales
           bacterium ALC-1]
 gi|159876041|gb|EDP70100.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Flavobacteriales
           bacterium ALC-1]
          Length = 484

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            + ++L   E  D   +LDL  GTG +   +  ++   K VGVDI   A+E AK NA  N
Sbjct: 323 VVDYALEIKEAIDNTVVLDLFCGTGTIGQIIASKANNTKIVGVDIVASAIEDAKENAKRN 382

Query: 145 GVS 147
            + 
Sbjct: 383 NIE 385


>gi|149178210|ref|ZP_01856804.1| probable cyclopropane-fatty-acyl-phospholipid synthase
           [Planctomyces maris DSM 8797]
 gi|148842992|gb|EDL57361.1| probable cyclopropane-fatty-acyl-phospholipid synthase
           [Planctomyces maris DSM 8797]
          Length = 454

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 26/127 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +++ G G GA+ L + +     K    +IS + L  A+  A   G+S++ + ++ 
Sbjct: 217 KTGDTVVEAGCGWGALALHMARYY-GVKVRAFNISREQLSYARDRARQEGLSQQVEFVED 275

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           DW  ++ G +D  VS            +   V              GL +YR + + +S 
Sbjct: 276 DW-RNITGTYDAFVSV----------GMLEHV--------------GLKNYRRLGEVISG 310

Query: 216 HLNKDGL 222
            L+  G 
Sbjct: 311 CLSPQGR 317


>gi|110679365|ref|YP_682372.1| ribosomal protein L11 methyltransferase, putative [Roseobacter
           denitrificans OCh 114]
 gi|109455481|gb|ABG31686.1| ribosomal protein L11 methyltransferase, putative [Roseobacter
           denitrificans OCh 114]
          Length = 290

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 20/111 (18%)

Query: 80  LLVDSALAF-------------SLPRIEKR--DVVRILDLGTGTGAVCLALLKESPFFKG 124
           LL+++A+AF             +L R++        + D+G GT  + +A  +       
Sbjct: 116 LLIEAAMAFGTGHHGTTLGCLRALDRLDNSGFSGKNVADIGCGTAVLAMAAARIWENP-V 174

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE----GLFDVIVSN 171
           +  DI   A+++AKSN   NG++ R   +++  F   E      FD++ +N
Sbjct: 175 LASDIDEVAVDVAKSNIAANGLTGRVFCVEAAGFDHPELRAAAPFDLVFAN 225


>gi|304383629|ref|ZP_07366088.1| methyltransferase domain protein [Prevotella marshii DSM 16973]
 gi|304335153|gb|EFM01424.1| methyltransferase domain protein [Prevotella marshii DSM 16973]
          Length = 265

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK----ALEIAKSN 140
              + + ++      ++LD+G G GA+ +      P  +  G+D        A    + N
Sbjct: 82  IHEYLVSKLPWNGEGQLLDIGCGAGALSIRCALRFPQARITGIDYWGAGWNYAQAQCERN 141

Query: 141 AVTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
           A   GV  R    + D       +  FD  VSN  + E          VR+
Sbjct: 142 ATIEGVINRMKFQKGDAAALDFDDETFDAAVSNFVFHEVRTQPEKQKVVRE 192


>gi|302683420|ref|XP_003031391.1| hypothetical protein SCHCODRAFT_56680 [Schizophyllum commune H4-8]
 gi|300105083|gb|EFI96488.1| hypothetical protein SCHCODRAFT_56680 [Schizophyllum commune H4-8]
          Length = 295

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 49/148 (33%), Gaps = 37/148 (25%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVT------NG 145
           +E +   RILDLG GTG +   L +   P     GVD S   +  A+           + 
Sbjct: 51  LEPKSGERILDLGCGTGELTATLARAVGPDGYVSGVDASANMVAKAREVVAASRAETSHV 110

Query: 146 VSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                D L +D          EG FD + SN           L    RD  P  +L    
Sbjct: 111 PMAPVDLLVADAQTLQLSPEQEGTFDAVFSN---------ATLHWCSRD--PLAAL---- 155

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIG 228
                        +R L   G  + E+G
Sbjct: 156 ----------QSAARALRPGGRFAAEMG 173


>gi|190574313|ref|YP_001972158.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Stenotrophomonas maltophilia K279a]
 gi|190012235|emb|CAQ45858.1| putative cyclopropane-fatty-acyl-phospholipid synthase
           [Stenotrophomonas maltophilia K279a]
          Length = 274

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 54/175 (30%), Gaps = 42/175 (24%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
             RL  SS  +    ET    + A L     R    D  +IL+LG G G++ L + +  P
Sbjct: 11  GKRLKYSSCYYPTGRETLDQAEDAMLELYGQRAGLADGQQILELGCGWGSLTLWMAERYP 70

Query: 121 FFKGVGVDISCK------ALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNP 172
                 V  S        A   A+         +    L  D          FD  VS  
Sbjct: 71  QAHITAVSNSHSQRQHIMAQCQAR-------GLDNVKVLTCDVNQLDLPTARFDRCVSV- 122

Query: 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     +   VR+++                 +  G++R L  DG   V I
Sbjct: 123 ---------EMFEHVRNYE----------------RLLAGIARWLKPDGALFVHI 152


>gi|48478506|ref|YP_024212.1| decarboxylating precorrin-6Y C5,15-methyltransferase [Picrophilus
           torridus DSM 9790]
 gi|48431154|gb|AAT44019.1| decarboxylating precorrin-6Y C5,15-methyltransferase [Picrophilus
           torridus DSM 9790]
          Length = 386

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 34/170 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
             +L  +  +D     D+G G+G + ++  K +P      ++ +  AL     N   N  
Sbjct: 221 DITLRLLNIKDNDVFWDIGAGSGFISISASKAAPGSLIYSIEKNKNAL----RNIYLNSR 276

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
               D              ++I    PY     +D L       DP     GG  GL   
Sbjct: 277 RYHSDI-------------NIIDGEAPY----CLDDLP------DPDAVFIGGSSGL--I 311

Query: 207 RTIADGVSRHLNKDGLCSVEIG--YNQKVDV---VRIFESRKLFLVNAFK 251
             I +   + L   G   + I    +    V    ++F +     V+ FK
Sbjct: 312 DDIIEYSYKRLRPGGRLVLNIATLNSLARAVNKMEKLFSNFSFEEVSVFK 361


>gi|332708898|ref|ZP_08428869.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
 gi|332352440|gb|EGJ32009.1| methylase involved in ubiquinone/menaquinone biosynthesis [Lyngbya
           majuscula 3L]
          Length = 344

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 30/174 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +V  +LD+G G+GA C AL +  P      +++     +IAK     +G+S+R DT   D
Sbjct: 175 NVKHLLDVGGGSGAFCFALAQRYPQIHCTILEL-PTICKIAKEYIAESGLSDRVDTCVGD 233

Query: 157 WF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY--RTIADGV 213
           +F       +D ++ +  + +     CL L  + F+   +L     G   Y    +    
Sbjct: 234 FFKDPFPAGYDAVLFSNIFHDWGWEKCLYLAKQSFE---AL---PHGGRIYLHEILLADT 287

Query: 214 SR-------------HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYG 254
                           + +    S         ++ ++ +      +   + YG
Sbjct: 288 KDSPLIATSFSLCLFWVTEGKQFS-------AAELEQLLQEAGFEEILIVQTYG 334


>gi|329894791|ref|ZP_08270592.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium IMCC3088]
 gi|328922780|gb|EGG30113.1| Cyclopropane-fatty-acyl-phospholipid synthase [gamma
           proteobacterium IMCC3088]
          Length = 419

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 10/130 (7%)

Query: 47  KHESIHRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA---LAFSLPRIEKRDVVR 100
           K+ + H  LG   ++ F +  +  S+  +E    T  L +++   L     ++E +    
Sbjct: 142 KNIAAHYDLGNDFFQHFLDPTMMYSAAVYE--DNTSNLHEASINKLRILCEQLELKPSDH 199

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++++G+G GA+ +   +     K     IS +  ++        G+ +R   L  D +  
Sbjct: 200 LVEIGSGWGAMAVYAAQNY-GCKVTTTTISQEQFKLTCERVKEAGLEDRVTVLCED-YRD 257

Query: 161 VEGLFDVIVS 170
           ++G +D +VS
Sbjct: 258 LKGQYDKLVS 267


>gi|294793541|ref|ZP_06758678.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella sp.
           3_1_44]
 gi|294455111|gb|EFG23483.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella sp.
           3_1_44]
          Length = 458

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 17/140 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D AL ++  + E+     ++D   GTG + L L  ++
Sbjct: 273 DLRFTLSPHSFFQVNPEQTTVLYDQALKYANLKGEE----TVIDAYCGTGTISLFLAHKA 328

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 329 K--HVIGIEIVEPAIINARENARRNGY-DNTEFIVADAAVEMPKLYKAGVRPDVIVFDP- 384

Query: 174 YIESVIVDCLGLEVRDFDPR 193
            I +     +       +P+
Sbjct: 385 -IRAGCKKEVLTSAAGMEPK 403


>gi|288957175|ref|YP_003447516.1| SAM-dependent methyltransferase [Azospirillum sp. B510]
 gi|288909483|dbj|BAI70972.1| SAM-dependent methyltransferase [Azospirillum sp. B510]
          Length = 403

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 24/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           R +D  +  G   +         + + VD S  ALE A   A  NGV++RF+  ++D F 
Sbjct: 231 RAIDFFSYNGGFGIQCAVAGAT-RVIAVDRSALALENATRAAEANGVADRFEARKADAFQ 289

Query: 160 SVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            +E        F V+V++PP       D                    G   YR +A   
Sbjct: 290 ELERLNAAGETFQVVVADPPAFVKSKKDLAV-----------------GCRAYRKMARLA 332

Query: 214 SRHLNKDGLCSV 225
           +R     G    
Sbjct: 333 ARITAPGGYLLC 344


>gi|289580575|ref|YP_003479041.1| hypothetical protein Nmag_0895 [Natrialba magadii ATCC 43099]
 gi|289530128|gb|ADD04479.1| protein of unknown function Met10 [Natrialba magadii ATCC 43099]
          Length = 366

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 15/127 (11%)

Query: 61  YNVRLTLS--SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           Y     L   +  F PR         A        +     ++ D+  G G   +     
Sbjct: 184 YGCEFVLDLAAVYFSPR--------LATERHRVTEQAAPDEQVFDMFAGVGPFVIPFANR 235

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNPPYI 175
               + VGVD++  A+E  + NA  NGV++R   +  D     S  +G  D IV N P+ 
Sbjct: 236 --GAECVGVDVNPDAIEYLRENARRNGVADRVTAICDDVRDVSSEYDGWADRIVMNLPHS 293

Query: 176 ESVIVDC 182
               V+ 
Sbjct: 294 ADEFVES 300


>gi|126326540|ref|XP_001375717.1| PREDICTED: similar to DC3 [Monodelphis domestica]
          Length = 206

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L       +  +   I DLG G G + +            G DI   ALEI   N   
Sbjct: 35  CMLYTIHNTYDDIENKVIGDLGCGCGMLSIGAAMLGAGLCV-GFDIDEDALEIFNKNVKE 93

Query: 144 NGVSERFDTLQSD---WFSSVEGLFDVIVSNPPY 174
             ++   D +Q +      ++   FD I+ NPP+
Sbjct: 94  FELT-NIDMIQCNVCSLSETISKSFDTIIMNPPF 126


>gi|37521220|ref|NP_924597.1| hypothetical protein gll1651 [Gloeobacter violaceus PCC 7421]
 gi|35212216|dbj|BAC89592.1| gll1651 [Gloeobacter violaceus PCC 7421]
          Length = 224

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P P  + +VD  L  +    +      I DLG+G G + +   K+    +G+G+DI+
Sbjct: 71  VYVPTP--QEVVDQMLTVAKVGKDD----VIYDLGSGDGRIVVTAAKQY-GARGIGIDIN 123

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS 159
              +  A  NA   GV+ +   L+ D F 
Sbjct: 124 PARIVEANENARKAGVTNQVRFLEQDLFE 152


>gi|89070185|ref|ZP_01157513.1| N-6 Adenine-specific DNA methylase [Oceanicola granulosus HTCC2516]
 gi|89044201|gb|EAR50352.1| N-6 Adenine-specific DNA methylase [Oceanicola granulosus HTCC2516]
          Length = 255

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 26/173 (15%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F   RLT++    +P+      +D  L      +  R     L+LG G G   L L + +
Sbjct: 14  FLGGRLTVA----QPKVGYRAGIDPVL--LAAAVPARAGETALELGCGVGVAALCLARRA 67

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPYI 175
           P  +  GV++      +A++NA  N +    + +++D  +   G     FD ++ NPPY 
Sbjct: 68  PGVRVTGVELQPAYAALARANADANDLP--LEVVEADLRALPPGVRSRSFDHVLMNPPYF 125

Query: 176 ESVIVDCLGLEVRDFDPRISLDGG---IDGLSHYRTIADGVSRHLNKDGLCSV 225
                       RD     +L G     D L           R L   G  ++
Sbjct: 126 APGAGTGSADPGRD----TALRGETAMADWLDV-------AIRRLAPRGRLTL 167


>gi|332290054|ref|YP_004420906.1| 23S rRNA methyluridine methyltransferase [Gallibacterium anatis
           UMN179]
 gi|330432950|gb|AEC18009.1| 23S rRNA methyluridine methyltransferase [Gallibacterium anatis
           UMN179]
          Length = 387

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 82  VDSALAF-SLPRIEKRDVVRILDLGTGTGAVCLALLKES----PFFKGVGVDISCKALEI 136
           V +AL   +    +   + +I DL  G G   L          P    VG++IS  A+  
Sbjct: 222 VAAALYHTAQQWTQALPIKQIWDLFCGVGGFGLHCALARKKVEPEVSLVGIEISESAIRS 281

Query: 137 AKSNAVTNGVSER-FDTLQSDWFSSVEG-LFDVIVSNPP 173
           A+  A   G+    F  L +  F + +G   D+++ NPP
Sbjct: 282 ARLAAEKAGLYNAIFQDLDASKFQANQGDKPDLVIVNPP 320


>gi|324009775|gb|EGB78994.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           57-2]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|320528066|ref|ZP_08029232.1| methyltransferase domain protein [Solobacterium moorei F0204]
 gi|320131692|gb|EFW24256.1| methyltransferase domain protein [Solobacterium moorei F0204]
          Length = 253

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 55/181 (30%), Gaps = 39/181 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI-----SCKALEIAK 138
             +      ++       LD+G G+GA+ +A  K +P     G+D      +  + E+ +
Sbjct: 72  QIIEGIAEYVKVPAGGSCLDVGCGSGALTIACAKRNPDALITGIDRWGKEYASFSQELCE 131

Query: 139 SNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
            NA+  GV      +  D    +  +  FD + SN  Y+   I      E          
Sbjct: 132 RNAMAEGVENT-RFIHGDAVSLNFPDESFDAVTSN--YVYHNIPSKNRQE---------- 178

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESRKLFLVNAF 250
                       I     R L K G  ++         Y      V   +S     V   
Sbjct: 179 ------------ILLETLRVLKKGGSFAI-HDIFSVSRYGDMNIFVERLKSMGYHNVELI 225

Query: 251 K 251
            
Sbjct: 226 P 226


>gi|292490458|ref|YP_003525897.1| cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
           halophilus Nc4]
 gi|291579053|gb|ADE13510.1| Cyclopropane-fatty-acyl-phospholipid synthase [Nitrosococcus
           halophilus Nc4]
          Length = 434

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR----DVVRILDLGTGTGAVCLAL 115
           F +  L  S   FE  P+  L  + A    L RI K+        +L++GTG G++ L  
Sbjct: 160 FLDKTLMYSCAVFEH-PQMSL--EQASMAKLDRICKKLVLTPQDHLLEIGTGWGSLALHA 216

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            +     +     IS +  + A       G+ +R   LQ D +  + G +D +VS
Sbjct: 217 ARHY-GCRVTTTTISEQQYQFACQRVREAGLEDRIRVLQQD-YRDLTGQYDKLVS 269


>gi|254501623|ref|ZP_05113774.1| ribosomal protein L11 methyltransferase [Labrenzia alexandrii
           DFL-11]
 gi|222437694|gb|EEE44373.1| ribosomal protein L11 methyltransferase [Labrenzia alexandrii
           DFL-11]
          Length = 296

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L      +  R+   ILDLGTGTG + +A   ++   + +  D    A   A  NA  NG
Sbjct: 140 LEEIDRLLSMREYDSILDLGTGTGVLAIAAALKARQ-QVLATDNDPIATRTALENARLNG 198

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
                    +    D   ++ G FD++++N
Sbjct: 199 ARHLVTGFTANGVEDRRFNLYGPFDLVIAN 228


>gi|221067155|ref|ZP_03543260.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Comamonas
           testosteroni KF-1]
 gi|220712178|gb|EED67546.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Comamonas
           testosteroni KF-1]
          Length = 236

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +L     A  L  ++ +   R+L++GTG+G +   L  ++   + V ++I  +  E+A+
Sbjct: 79  HMLAPKIEARMLQDVKIKPTDRVLEIGTGSGYMAALLAAQAK--EVVTLEIDPELAEMAR 136

Query: 139 SNAVTNGV-SERFDTLQSDWFSSVEGLFDVIV 169
            N ++ GV +           S  +G FDVIV
Sbjct: 137 ENLLSAGVKNVEVKLANGATASLAQGAFDVIV 168


>gi|15677697|ref|NP_274858.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           MC58]
 gi|38605482|sp|Q9JXW2|PRMA_NEIMB RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|7227119|gb|AAF42196.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           MC58]
 gi|316985471|gb|EFV64418.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           H44/76]
 gi|325133507|gb|EGC56170.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M13399]
 gi|325139522|gb|EGC62062.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           CU385]
 gi|325143757|gb|EGC66074.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240013]
 gi|325200920|gb|ADY96375.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           H44/76]
 gi|325206774|gb|ADZ02227.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M04-240196]
          Length = 295

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK    F  VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGF-AVGVDIDEQAVRAGKDNAAQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|91209893|ref|YP_539879.1| 23S rRNA methyluridine methyltransferase [Escherichia coli UTI89]
 gi|110641061|ref|YP_668791.1| 23S rRNA methyluridine methyltransferase [Escherichia coli 536]
 gi|117623039|ref|YP_851952.1| 23S rRNA methyluridine methyltransferase [Escherichia coli APEC O1]
 gi|191172086|ref|ZP_03033630.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli F11]
 gi|218557763|ref|YP_002390676.1| 23S rRNA methyluridine methyltransferase [Escherichia coli S88]
 gi|237707177|ref|ZP_04537658.1| 23S rRNA methyluridine methyltransferase [Escherichia sp.
           3_2_53FAA]
 gi|300991847|ref|ZP_07179672.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           200-1]
 gi|122424458|sp|Q1RE66|RUMB_ECOUT RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|122958455|sp|Q0TJI9|RUMB_ECOL5 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|143582665|sp|A1A998|RUMB_ECOK1 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|226725401|sp|B7MHG3|RUMB_ECO45 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|91071467|gb|ABE06348.1| hypothetical RNA methyltransferase YbjF [Escherichia coli UTI89]
 gi|110342653|gb|ABG68890.1| hypothetical RNA methyltransferase YbjF [Escherichia coli 536]
 gi|115512163|gb|ABJ00238.1| hypothetical RNA methyltransferase YbjF [Escherichia coli APEC O1]
 gi|190907613|gb|EDV67208.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli F11]
 gi|218364532|emb|CAR02214.1| 23S rRNA m(5)U747 methyltransferase [Escherichia coli S88]
 gi|226898387|gb|EEH84646.1| 23S rRNA methyluridine methyltransferase [Escherichia sp.
           3_2_53FAA]
 gi|294492584|gb|ADE91340.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           IHE3034]
 gi|300305457|gb|EFJ59977.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           200-1]
 gi|307627732|gb|ADN72036.1| 23S rRNA methyluridine methyltransferase [Escherichia coli UM146]
 gi|315287309|gb|EFU46720.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           110-3]
 gi|320196646|gb|EFW71269.1| 23S rRNA methyluridine methyltransferase [Escherichia coli
           WV_060327]
 gi|323953437|gb|EGB49303.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli H252]
 gi|323958148|gb|EGB53857.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli H263]
 gi|324013021|gb|EGB82240.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           60-1]
          Length = 375

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|325127520|gb|EGC50446.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           N1568]
          Length = 295

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|315050428|ref|XP_003174588.1| trimethylguanosine synthase [Arthroderma gypseum CBS 118893]
 gi|311339903|gb|EFQ99105.1| trimethylguanosine synthase [Arthroderma gypseum CBS 118893]
          Length = 238

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + +        ++D+  G G   +A  K + + +   ++   + L+ A
Sbjct: 52  TPEPVANKIALHMAQAAPEKKCILIDVFAGAGGNTIAFAKSNRWKRVYAIEKDRETLKCA 111

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV+++      D F  ++        + VI  +PP+            +   +
Sbjct: 112 KHNAELYGVADKITWFVGDCFELLQDQLKDLAPYSVIFGSPPWGGPGYRSDAVFNLSTME 171

Query: 192 P 192
           P
Sbjct: 172 P 172


>gi|295107662|emb|CBL05205.1| Type I restriction-modification system methyltransferase subunit
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 526

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 24/167 (14%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG----VGV 127
           F P+   ELL   A+       +++ V ++ D   G+G + L   K            G 
Sbjct: 211 FTPQEVGELLARIAIG------DRKSVNKVYDPCCGSGGLLLKFAKILGKENVRNGYFGQ 264

Query: 128 DISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV----EGLFDVIVSNPPYIESVIVDC 182
           +I+     +A+ N   + V+ ++FD    D         +  FD IVSNPPY        
Sbjct: 265 EINLTTYNLARINMFLHDVNFDKFDIALGDTLKEPAHWDDEPFDAIVSNPPYSIKWEGKA 324

Query: 183 LGLEVRD--FDPR--ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
             L + D  F P   ++     D L+    +       L+ +G  ++
Sbjct: 325 NPLNINDARFSPAGVLAPASKAD-LAFTMHMLS----WLSTEGTAAI 366


>gi|167760470|ref|ZP_02432597.1| hypothetical protein CLOSCI_02844 [Clostridium scindens ATCC 35704]
 gi|167661836|gb|EDS05966.1| hypothetical protein CLOSCI_02844 [Clostridium scindens ATCC 35704]
          Length = 460

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGTGT 108
           + G   FY     ++  ++  +F    +T  L    L             ++L DL +GT
Sbjct: 268 LYGQDFFYEELLGLKFKITPFSFF---QTNSLGAEVLYEKTREYIGETKDKVLFDLYSGT 324

Query: 109 GAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGL 164
           G +   +    P  K  VGV+I  +A+E A+ NA  NG+ +       D       +  +
Sbjct: 325 GTIAQIVA---PVAKKVVGVEIVEEAVEAARENAALNGL-DNCTFWAGDVLKVIDELGEV 380

Query: 165 FDVIVSNPP 173
            DVI+ +PP
Sbjct: 381 PDVIILDPP 389


>gi|163853875|ref|YP_001641918.1| ribosomal L11 methyltransferase [Methylobacterium extorquens PA1]
 gi|163665480|gb|ABY32847.1| ribosomal L11 methyltransferase [Methylobacterium extorquens PA1]
          Length = 305

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   +  +++R    +LD+GTGTG +  A  K       V  D+  +A+  A+ NA  NG
Sbjct: 146 LRALVDELKRRRPAHVLDVGTGTGILGFAAAKVLRTP-VVAGDLDPEAVTTARGNARLNG 204

Query: 146 VSERFDTLQS----DWFSSVEGLFDVIVSN 171
           +        +       ++    FDV+ +N
Sbjct: 205 LGPFMRFYHAPGVRHALANRPRGFDVVFAN 234


>gi|153810847|ref|ZP_01963515.1| hypothetical protein RUMOBE_01231 [Ruminococcus obeum ATCC 29174]
 gi|149833243|gb|EDM88325.1| hypothetical protein RUMOBE_01231 [Ruminococcus obeum ATCC 29174]
          Length = 184

 Score = 55.5 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 9/115 (7%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + ++      P I      R LDL +G+G + +  L        V V+ + KA 
Sbjct: 22  RPTTDRIKETLFNILQPEIPD---CRFLDLFSGSGGIGIEALSRGAES-AVFVEKNPKAC 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLG 184
              + N     ++E    L  D   ++     E  FD I  +PPY + +    L 
Sbjct: 78  ACIRENLTFTKLAEHGKLLNMDVLQALRSLEGEEAFDCIFMDPPYNKDLERQVLE 132


>gi|237803172|ref|YP_002888366.1| rRNA methyltransferase [Chlamydia trachomatis B/Jali20/OT]
 gi|231274406|emb|CAX11201.1| rRNA methyltransferase [Chlamydia trachomatis B/Jali20/OT]
          Length = 396

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 13/131 (9%)

Query: 53  RILGWRDFYNVRLTLSSDT----FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLG 105
            + G   F   +L++   +      PR       L  +  +      I+      +LDL 
Sbjct: 200 HLYG-APFLKQQLSIDGRSSLFHIRPRSFFQPQSLQAEKIIQTIKEFIDPCGEETLLDLY 258

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
            G G + + L       K +GV++   A+  A+ N   N V       D  Q    +   
Sbjct: 259 CGAGIIGILLAPYVK--KIIGVELVPDAVASAQENIQLNSVDMEVFLEDAKQFCKRNENL 316

Query: 163 GLFDVIVSNPP 173
              D++V +PP
Sbjct: 317 PSPDIVVIDPP 327


>gi|260881273|ref|ZP_05404036.2| methyltransferase [Mitsuokella multacida DSM 20544]
 gi|260848999|gb|EEX69006.1| methyltransferase [Mitsuokella multacida DSM 20544]
          Length = 251

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 52/167 (31%), Gaps = 34/167 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L  +      +++DLG G G   L    +S  ++ +G+D S   LEIA+        
Sbjct: 24  EDVLKLLTVGPGSKVVDLGCGNG--SLTDRLQSLGYQVMGIDASPAMLEIARK------E 75

Query: 147 SERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
                  Q+D  S  ++   D I SN       +   +                      
Sbjct: 76  YPNISFQQADALSFQLDTPADAIFSN------AVFHWIDA------------------DK 111

Query: 206 YRTIADGVSRHLNKDGLCSVEI-GYNQKVDVVRIFESRKLFLVNAFK 251
             T+   VSR+L   G    E  GY     V    E         +K
Sbjct: 112 QETLLRNVSRNLRPGGELVCEFGGYGCGEAVHSTLEELFREHKRTYK 158


>gi|222528214|ref|YP_002572096.1| O-methyltransferase-like protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455061|gb|ACM59323.1| O-methyltransferase-like protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 240

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL-LKESPFFKGVGVDISCKALEIAKSNA 141
           D+ +     +I+K DV  +++ GTG   + + L  K   F K   V+I  +  ++A  N 
Sbjct: 26  DAVVLSDFIQIKKNDV--VVEFGTGNLIIPILLWAKGKKFKKLYAVEIQKEVCDLAVLNR 83

Query: 142 VTNGVSERFDTLQSDWFSSVE----GLFDVIVSNPPYIE---SVIVDCLGLEVRDFDPRI 194
             N + +R + + +D   +++       +V+ +NPPY +     I   +   +   +   
Sbjct: 84  NINNLQDRIEVINADLKDALKIFGSEFANVVFTNPPYRKVNSGTINPNIKKAIARHEIMC 143

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +             +     + L   G   +
Sbjct: 144 T----------IEDVVRSAMQILKFGGRFYM 164


>gi|159486404|ref|XP_001701231.1| methyltransferase [Chlamydomonas reinhardtii]
 gi|158271931|gb|EDO97741.1| methyltransferase [Chlamydomonas reinhardtii]
          Length = 259

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 51/165 (30%), Gaps = 23/165 (13%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA-VTNGVSERFDTLQSDWF 158
           R+LD G G G   L + K  P      VD+S + +  A + A +    S       +   
Sbjct: 82  RVLDAGCGIGDNALFIAKACPQAHVTAVDVSPRCVAFATAKAGLRRMTSGLITLETASLT 141

Query: 159 SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLN 218
                     VS+P    +  V         F      D        Y   A  + R L 
Sbjct: 142 EPEPERQAACVSSPASDGTFDVVLDSSTFHCF-----CDADR---ELY---AASLRRLLR 190

Query: 219 KDGLCSV------EI--GYNQKVDVVRI---FESRKLFLVNAFKD 252
             G   V      E   G  ++V V  +   F  +  + V   +D
Sbjct: 191 PGGKLFVNCMSEAETRPGGPRRVSVAELLSMFNRQSGWEVEVIED 235


>gi|152976345|ref|YP_001375862.1| putative methyltransferase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025097|gb|ABS22867.1| putative methyltransferase [Bacillus cytotoxicus NVH 391-98]
          Length = 188

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 41/189 (21%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           RP T+ + +S      P     D    LDL  G+G + +  L      K + VD   KA+
Sbjct: 22  RPTTDKVKESIFNIIGPYF---DGGSALDLFGGSGGLGIEALSRGMD-KVIFVDRDHKAV 77

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVR 188
           +I + N  +  V  + +  ++D   +V+ L      FD+I+ +PPY +  IV  +     
Sbjct: 78  KIIRQNLESCRVHNQAEVYRNDAERAVKALIKREISFDLILLDPPYKDQKIVSLIS---- 133

Query: 189 DFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG------YNQKVDVVRIFESR 242
                               I D     LN+DGL   E G            V    E  
Sbjct: 134 --------------------IIDQ-HGLLNEDGLIMAEHGNEVILPETIGKLVKVRAEKY 172

Query: 243 KLFLVNAFK 251
            +  ++ +K
Sbjct: 173 GITAISIYK 181


>gi|6572595|gb|AAF17312.1|AF139330_1 microcystin synthetase [Microcystis aeruginosa UTEX 'B 2667']
 gi|6572597|gb|AAF17313.1|AF139331_1 microcystin synthetase [Microcystis aeruginosa]
 gi|6572619|gb|AAF17324.1|AF139342_1 microcystin synthetase [Microcystis aeruginosa PCC 7806]
          Length = 440

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   ++  L D Q     +   +         + I  I+GW  
Sbjct: 8   SQTLIAYVVGQSQEGELLTTSENGQLFDEQIGQWQSLYNQIYSQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPAAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPKL-EQVRLLHSTADKFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|297748873|gb|ADI51419.1| tRNA (Uracil-5-) -methyltransferase [Chlamydia trachomatis D-EC]
 gi|297749753|gb|ADI52431.1| tRNA (Uracil-5-) -methyltransferase [Chlamydia trachomatis D-LC]
          Length = 430

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 13/131 (9%)

Query: 53  RILGWRDFYNVRLTLSSDT----FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLG 105
            + G   F   +L++   +      PR       L  +  +      I+      +LDL 
Sbjct: 234 HLYG-APFLKQQLSIDGRSSLFHIRPRSFFQPQSLQAEKIIQTIKEFIDPCGEETLLDLY 292

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
            G G + + L       K +GV++   A+  A+ N   N V       D  Q    +   
Sbjct: 293 CGAGIIGILLAPYVK--KIIGVELVPDAVASAQENIQLNSVDMEVFLEDAKQFCKRNENL 350

Query: 163 GLFDVIVSNPP 173
              D++V +PP
Sbjct: 351 PSPDIVVIDPP 361


>gi|83591958|ref|YP_425710.1| Mg-protoporphyrin IX methyl transferase [Rhodospirillum rubrum ATCC
           11170]
 gi|83574872|gb|ABC21423.1| Magnesium protoporphyrin O-methyltransferase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 236

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFF 122
           RLT  +   + R       DS     L  +       R+LD G GTG    A+       
Sbjct: 27  RLTSDAPVGKIRATVRAGRDSMRETLLSWLPDDLSGTRLLDAGCGTG--SFAVEAARRGA 84

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V +DIS   +++A+  A       R +    D      G FD +V+    I     D 
Sbjct: 85  SVVAIDISPTLIDLARERAAEVTGPGRIEFRVGDMLDPALGEFDHVVAMDSLIHYQAADT 144

Query: 183 LG 184
           + 
Sbjct: 145 VQ 146


>gi|15605475|ref|NP_220261.1| rRNA methyltransferase [Chlamydia trachomatis D/UW-3/CX]
 gi|76789483|ref|YP_328569.1| rRNA methyltransferase [Chlamydia trachomatis A/HAR-13]
 gi|237805093|ref|YP_002889247.1| rRNA methyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|7404497|sp|P55137|Y742_CHLTR RecName: Full=Uncharacterized RNA methyltransferase CT_742;
           AltName: Full=Protein HOM1
 gi|6578112|gb|AAC68337.2| rRNA Methyltransferse [Chlamydia trachomatis D/UW-3/CX]
 gi|76168013|gb|AAX51021.1| rRNA methyltransferase [Chlamydia trachomatis A/HAR-13]
 gi|231273393|emb|CAX10308.1| rRNA methyltransferase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|296436289|gb|ADH18463.1| rRNA methyltransferase [Chlamydia trachomatis G/9768]
 gi|296437218|gb|ADH19388.1| rRNA methyltransferase [Chlamydia trachomatis G/11222]
 gi|296438148|gb|ADH20309.1| rRNA methyltransferase [Chlamydia trachomatis G/11074]
 gi|297140649|gb|ADH97407.1| rRNA methyltransferase [Chlamydia trachomatis G/9301]
          Length = 396

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 13/131 (9%)

Query: 53  RILGWRDFYNVRLTLSSDT----FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLG 105
            + G   F   +L++   +      PR       L  +  +      I+      +LDL 
Sbjct: 200 HLYG-APFLKQQLSIDGRSSLFHIRPRSFFQPQSLQAEKIIQTIKEFIDPCGEETLLDLY 258

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
            G G + + L       K +GV++   A+  A+ N   N V       D  Q    +   
Sbjct: 259 CGAGIIGILLAPYVK--KIIGVELVPDAVASAQENIQLNSVDMEVFLEDAKQFCKRNENL 316

Query: 163 GLFDVIVSNPP 173
              D++V +PP
Sbjct: 317 PSPDIVVIDPP 327


>gi|324388026|gb|ADY38788.1| methyltransferase [Coffea arabica]
          Length = 315

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 54/197 (27%), Gaps = 28/197 (14%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L         RD  ++L++G G G+  L +L+          D S +AL+ AK N     
Sbjct: 78  LKEFPELASCRDYAKVLEVGCGNGSTALPILRAKENIVVYACDCSNEALDRAKENIAAAN 137

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGL--EVRDFDPRISLDGGIDGL 203
           +                  F   ++     E      +    EV   +      GG+D +
Sbjct: 138 LISAEHRYHPFLCDISTSGFPEWLACSSCQERFCKSSMVDFCEVSCSEESSCCIGGVDLV 197

Query: 204 SHYRTI-----------ADGVSRHLNKDGLCSV-----------EIGYNQKVDVVRIFES 241
           +   T+                  L   G+                   Q+V       S
Sbjct: 198 TLIFTLSALPLHMMPTAIQECFSVLKPGGMLLFRDYGLYDMTMLRFDPEQRVGYREYMRS 257

Query: 242 RK----LFLVNAFKDYG 254
                  F + + +D  
Sbjct: 258 DGTRSYFFSLESTRDLF 274


>gi|323967294|gb|EGB62717.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli M863]
 gi|327253646|gb|EGE65275.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           STEC_7v]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|296102690|ref|YP_003612836.1| cyclopropane fatty acyl phospholipid synthase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057149|gb|ADF61887.1| cyclopropane fatty acyl phospholipid synthase [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 382

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 30/140 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +  +R+LD+G G G +   + K       VGV IS +  ++A+       
Sbjct: 156 LRLISEKLQLQPGMRVLDIGCGWGGLAYFMAKHY-GVSVVGVTISAEQQKMARERCQGLD 214

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           V  R        +  +   FD IVS                V  F+  +    G      
Sbjct: 215 VDIRLQD-----YRDLNEQFDRIVS----------------VGMFE-HV----GPKNYDT 248

Query: 206 YRTIADGVSRHLNKDGLCSV 225
           Y  + D   R+L  DG+  +
Sbjct: 249 YFEVVD---RNLKPDGIFLL 265


>gi|260774924|ref|ZP_05883825.1| methyltransferase small [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609179|gb|EEX35337.1| methyltransferase small [Vibrio coralliilyticus ATCC BAA-450]
          Length = 258

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 67/187 (35%), Gaps = 44/187 (23%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           +V    A  L R+    V R+LD+G G+G V   +   S     V +D+S + LE A   
Sbjct: 12  IVQFDAAKELIRLLPTKVGRLLDVGCGSGKVAHLIHDHSSPQTMVAIDVSSEMLEQA--- 68

Query: 141 AVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
            +        D + +D    + E  FDVI SN  +             +D+D   +L   
Sbjct: 69  -LHLYPDSPIDFVHADIVDYASEEGFDVITSNSSF----------QWYQDYD--AALSA- 114

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK--VDVVRIFESRKLFLVNAFKDYG--- 254
                            L  DG+  ++  Y Q     V  +           F+D+    
Sbjct: 115 ----------IRTA---LKPDGMFVLQTPYKQDWCPQVSNLMS-------EFFRDFYPQL 154

Query: 255 GND-RVL 260
           G D R++
Sbjct: 155 GRDFRMV 161


>gi|254502874|ref|ZP_05115025.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11]
 gi|222438945|gb|EEE45624.1| Methyltransferase small domain family [Labrenzia alexandrii DFL-11]
          Length = 347

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 27/164 (16%)

Query: 67  LSSDTFEPRPETELL--VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           +    +  RP       +D A       +      R  DLG G G +   +L+++P  K 
Sbjct: 166 VLDGAYISRPGVFAWDRIDPASRLLAENLPDSLSGRGADLGAGFGYLSRQVLEKAP--KV 223

Query: 125 VGVDISCK---ALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVD 181
             +D+      AL++A+ N       +    + SD    +EG +D +VSNPP+ +S   D
Sbjct: 224 AALDLYEAEKRALDLAEQNLAPFKGKKAMTGIWSDVTKGIEGPYDFLVSNPPFHQSGKAD 283

Query: 182 CLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        +  G        +      ++ L   G+  +
Sbjct: 284 ------------RADVG--------QGFIRAAAQGLRSGGVFYL 307


>gi|145345793|ref|XP_001417384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577611|gb|ABO95677.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 297

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L  +L R  K ++  ++D G G+G + +  L      + VGVD++ +A++ 
Sbjct: 139 PTTRLCLRWLKQTLARRGKTEL--VVDFGCGSGVLAIGALVMGAD-RAVGVDLAKQAVQS 195

Query: 137 AKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
           +  NA  NGV +R  T   D          G  DV+V+N           L   V + +P
Sbjct: 196 SIDNAKLNGVEDRLTTYLGDGRDPGTPGANGQADVVVAN----------ILIGPVLELEP 245

Query: 193 RIS 195
             +
Sbjct: 246 LFA 248


>gi|119469769|ref|XP_001257977.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL
           181]
 gi|119406129|gb|EAW16080.1| RNA methylase family protein, putative [Neosartorya fischeri NRRL
           181]
          Length = 238

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + R        ++D   G G   +A  +   + +   ++ +   L+ A
Sbjct: 55  TPEPVANKIAEDIARAAPAGRSILVDAFAGAGGNTIAFARTGKWKRVYAIEKNPAVLQCA 114

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV+++    + D FS ++        + VI ++PP+            +   +
Sbjct: 115 KHNAQVYGVADKITWFEGDCFSILKDQLKELAPYSVIFASPPWGGPGYRSDEVFNLWTME 174

Query: 192 P 192
           P
Sbjct: 175 P 175


>gi|28378753|ref|NP_785645.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum
           WCFS1]
 gi|28271590|emb|CAD64495.1| N6-adenine-specific methylase (putative) [Lactobacillus plantarum
           WCFS1]
          Length = 187

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF   RL       + RP T+ + ++      P  +       LDL  G+G + +     
Sbjct: 7   DFGGRRLKAVPG-MQTRPTTDKVKEAVFNIIGPYFDGGQS---LDLFAGSGGLSIE-AVS 61

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW------FSSVEGLFDVIVSNP 172
               + V +D   +A++  K N     V ERF+ ++ D        +S +  FD +  +P
Sbjct: 62  RGVARAVLIDRQYQAIKTIKDNIAVTKVPERFEVIKGDAERILDRLASQDEHFDWVFLDP 121

Query: 173 PYIESVIVDCLGL 185
           PY +  IV  +  
Sbjct: 122 PYAKQQIVKDIQH 134


>gi|307943553|ref|ZP_07658897.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseibium sp.
           TrichSKD4]
 gi|307773183|gb|EFO32400.1| cyclopropane-fatty-acyl-phospholipid synthase [Roseibium sp.
           TrichSKD4]
          Length = 410

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 46/88 (52%), Gaps = 3/88 (3%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L   + ++  +  + +L++G G G++ + + +     K   +++S + ++IA+    
Sbjct: 160 DAKLTHLVAKLNLKPGMEVLEIGGGWGSLAIRMAQA--GAKVRSLNVSPEQVKIAEERVK 217

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             GV+++   +  D +   EG FD ++S
Sbjct: 218 AAGVADQVTFVLKD-YREFEGQFDRVIS 244


>gi|300935050|ref|ZP_07150082.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           21-1]
 gi|281177994|dbj|BAI54324.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300459713|gb|EFK23206.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           21-1]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|264678418|ref|YP_003278325.1| protein-L-isoaspartate(D-aspartate) [Comamonas testosteroni CNB-2]
 gi|299532266|ref|ZP_07045660.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Comamonas
           testosteroni S44]
 gi|262208931|gb|ACY33029.1| protein-L-isoaspartate(D-aspartate) [Comamonas testosteroni CNB-2]
 gi|298719928|gb|EFI60891.1| protein-L-isoaspartate(D-aspartate) O-methyltransferase [Comamonas
           testosteroni S44]
          Length = 236

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 79  ELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
            +L     A  L  ++ +   R+L++GTG+G +   L  ++   + V ++I  +  E+A+
Sbjct: 79  HMLAPKIEARMLQDVKIKPTDRVLEIGTGSGYMAALLAAQAK--EVVTLEIDPELAEMAR 136

Query: 139 SNAVTNGV-SERFDTLQSDWFSSVEGLFDVIV 169
            N ++ GV +           S  +G FDVIV
Sbjct: 137 ENLLSAGVKNVEVKLANGATASLAQGAFDVIV 168


>gi|257466197|ref|ZP_05630508.1| hypothetical protein FgonA2_01995 [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315917355|ref|ZP_07913595.1| DNA modification methyltransferase [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|313691230|gb|EFS28065.1| DNA modification methyltransferase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 481

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 77/198 (38%), Gaps = 28/198 (14%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF------FKG 124
            + P  E++ +   A  ++ P+++     ++ DL  G G + ++              + 
Sbjct: 8   IYTPIQESKQIAKLAFTYAPPKVKW----KLADLSCGNGNLLVSFAGYMKEQNRMIPIQY 63

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G DI  KA+  A+ N + N     + + +   F   E  FD+I+ NPPY+       + 
Sbjct: 64  YGYDIDEKAIIEAR-NRLLN--ENCYFSCEDSLFLGKEKKFDIILGNPPYLGEKNHKEIF 120

Query: 185 LEVRDFDPRISLDGGI--DG-LSHYRTIADGVSRHLNKDGLC-SVEIGY----NQKVDVV 236
            +++  +      G    +G + +     +     L ++G+   +   Y    +    + 
Sbjct: 121 DDLKKTE-----FGKKYYEGKMDYLYFFIEKAIDLLEEEGILVYLTTDYWLVADGAKTLR 175

Query: 237 RIFESRKLFLVNAFKDYG 254
           R  +    FL   F+DY 
Sbjct: 176 RTLKKEGEFL--YFQDYN 191


>gi|331651874|ref|ZP_08352893.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli M718]
 gi|331050152|gb|EGI22210.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli M718]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|331646127|ref|ZP_08347230.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli M605]
 gi|330910641|gb|EGH39151.1| 23S rRNA (Uracil-5-) -methyltransferase rumB [Escherichia coli
           AA86]
 gi|331044879|gb|EGI17006.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli M605]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|296109790|ref|YP_003616739.1| protein of unknown function Met10 [Methanocaldococcus infernus ME]
 gi|295434604|gb|ADG13775.1| protein of unknown function Met10 [Methanocaldococcus infernus ME]
          Length = 252

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 73  EPRPETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            P+  + LL D   LA     IEK     + DLGTG+G + +   K++   K   +++  
Sbjct: 5   VPQWHSSLLTDYERLAIFKLAIEKYAKGIVYDLGTGSGILAMIAAKKAE--KVYALELDS 62

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDW-FSSVEGLFDVIVS 170
              E AK N   NG        ++D  F   +   D+I++
Sbjct: 63  FTYEYAKENIERNGFK-NILLYEADAEFFDYKEKADLIIA 101


>gi|255953071|ref|XP_002567288.1| Pc21g02240 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588999|emb|CAP95121.1| Pc21g02240 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 338

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 45/133 (33%), Gaps = 35/133 (26%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           I+     RILD+GTG G   L + ++ P    +G D+S                      
Sbjct: 88  IQDSHPRRILDIGTGPGEWALEMAEDYPQADVIGTDLSP--------------------- 126

Query: 153 LQSDWFSSVEGLFDVIVSNPPYIESVIVDCL--GLEVRDFDPRISLDGGIDGLSHYRTIA 210
           +Q +W S     F        YI+    D      E  D+    ++ G   G+  +  + 
Sbjct: 127 IQPNW-SPPNCRF--------YIDDAESDWTFSPGEAFDYIHLRTMAG---GIGDWPKLI 174

Query: 211 DGVSRHLNKDGLC 223
               +HL   G  
Sbjct: 175 KQAYQHLKPGGWF 187


>gi|82543347|ref|YP_407294.1| 23S rRNA methyluridine methyltransferase [Shigella boydii Sb227]
 gi|123560143|sp|Q323P2|RUMB_SHIBS RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|81244758|gb|ABB65466.1| putative enzyme [Shigella boydii Sb227]
 gi|320183201|gb|EFW58059.1| 23S rRNA methyluridine methyltransferase [Shigella flexneri CDC
           796-83]
 gi|332097262|gb|EGJ02245.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella boydii
           3594-74]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|24112229|ref|NP_706739.1| 23S rRNA methyluridine methyltransferase [Shigella flexneri 2a str.
           301]
 gi|30062341|ref|NP_836512.1| 23S rRNA methyluridine methyltransferase [Shigella flexneri 2a str.
           2457T]
 gi|110804856|ref|YP_688376.1| 23S rRNA methyluridine methyltransferase [Shigella flexneri 5 str.
           8401]
 gi|50401545|sp|Q83S14|RUMB_SHIFL RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|123048499|sp|Q0T8K2|RUMB_SHIF8 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|24051076|gb|AAN42446.1| putative enzyme [Shigella flexneri 2a str. 301]
 gi|30040586|gb|AAP16318.1| putative enzyme [Shigella flexneri 2a str. 2457T]
 gi|110614404|gb|ABF03071.1| putative enzyme [Shigella flexneri 5 str. 8401]
 gi|281600182|gb|ADA73166.1| 23S rRNA (uracil-5-)-methyltransferase [Shigella flexneri 2002017]
 gi|313650234|gb|EFS14646.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri 2a
           str. 2457T]
 gi|332759770|gb|EGJ90073.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           4343-70]
 gi|332760447|gb|EGJ90736.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           2747-71]
 gi|332763075|gb|EGJ93320.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           K-671]
 gi|332768030|gb|EGJ98216.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           2930-71]
 gi|333006661|gb|EGK26160.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           VA-6]
 gi|333006961|gb|EGK26456.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           K-218]
 gi|333008832|gb|EGK28292.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           K-272]
 gi|333020141|gb|EGK39411.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           K-227]
 gi|333020973|gb|EGK40231.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shigella flexneri
           K-304]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|299471633|emb|CBN76855.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 817

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++  V +LD+GTGTG + + L   +        +++    ++A+     NGV++R   + 
Sbjct: 77  QKAGVTVLDIGTGTGILAV-LAARAGASHVYACEVNSVLCDVAREVLERNGVADRVTVIH 135


>gi|225574873|ref|ZP_03783483.1| hypothetical protein RUMHYD_02951 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037947|gb|EEG48193.1| hypothetical protein RUMHYD_02951 [Blautia hydrogenotrophica DSM
           10507]
          Length = 408

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD  T TG+  L           +GVD S      A+ NA  NG+ +R + L +D F
Sbjct: 232 ARVLDCFTHTGSFALNAALGGARS-VLGVDASESGCARARENARLNGMEDRVEFLCADVF 290

Query: 159 SSVEG------LFDVIVSNPP 173
             +         FDV++ +PP
Sbjct: 291 ELLPQLEQEGEKFDVVILDPP 311


>gi|218670914|ref|ZP_03520585.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli GR56]
          Length = 270

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 5/114 (4%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           F +     S   F+P      L ++ LA       ++  +   RIL++G+G G + + L 
Sbjct: 29  FLDEDWQYSCGYFDP--PGISLDEAQLAKKRHIAAKLLLKPNQRILEIGSGWGGMGMYLT 86

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + +   +  G+ +S + L+++++ A   G+++R      D+ S     FD IVS
Sbjct: 87  EATEGAEFTGITLSEEQLKVSRARAEKRGLADRVRFELQDYRSMTGQKFDRIVS 140


>gi|134034819|gb|ABO45735.1| microcystin synthetase N-methyltranserase domain [Microcystis
           viridis N-C 169/7]
          Length = 497

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 50  SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 109

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 110 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 155

Query: 120 PFFKG-VGVDISCKAL-EIAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL +I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 156 PHCQCYWGTDISSVALDDIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 211

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 212 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 244

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 245 VRNLQLMEAFHADVELYK 262


>gi|119946820|ref|YP_944500.1| methyltransferase of 50S ribosomal subunit protein L11
           [Psychromonas ingrahamii 37]
 gi|119865424|gb|ABM04901.1| LSU ribosomal protein L11P methyltransferase [Psychromonas
           ingrahamii 37]
          Length = 311

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G + +A LK     + +G+D+  +A+  ++ NA  N VS++ +         
Sbjct: 177 VIDFGCGSGILAIAALKLGAK-RVIGIDLDPQAITASRDNAQRNNVSDQLELYLPADLP- 234

Query: 161 VEGLF-DVIVSN 171
            EG+F DV+V+N
Sbjct: 235 -EGIFADVLVAN 245


>gi|83592064|ref|YP_425816.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           rubrum ATCC 11170]
 gi|83574978|gb|ABC21529.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodospirillum
           rubrum ATCC 11170]
          Length = 427

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 34/219 (15%)

Query: 52  HRILGWRDFYN---VRLTLSSDTFEPRPETELLVDSALAFSLPRI-EKRDVVRILDLGTG 107
           H  LG   +       +T SS  FE   E+     +     L  +      +R+L++G G
Sbjct: 151 HYDLGNAFYQGWLDPSMTYSSALFEGESESLEAAQTRKYQRLAALLSLEPGMRVLEIGCG 210

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G     L       + VG+ +S + L   +      G+  + D    D +  V G FD 
Sbjct: 211 WGGFAE-LAARDYGVEVVGITLSQEQLSWGRERIRRAGLEGKVDLRLQD-YRDVTGQFDR 268

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRIS------LDG------GIDGLSHYRTIADGVSR 215
           +VS    IE             F+   +      L          D    YR+ AD + +
Sbjct: 269 VVS----IEMFEAVGQDHWPIYFESLRARLKPGGLAALQVITIAADRFEDYRSGADFIQK 324

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFES---RKLFLVNAFK 251
           H+   G+            V R+ E+     L      +
Sbjct: 325 HIFPGGML---------PSVPRLLEAIDKAGLVGAEVQR 354


>gi|309379478|emb|CBX21844.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 295

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK        GVDI  +A+   + NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGSTV-GVDIDEQAVRAGRDNAAQNNVDAQF----- 215

Query: 156 DWFSSVE-GLFDVIVSN 171
                +  G FDV+V+N
Sbjct: 216 YLPEQLPSGQFDVVVAN 232


>gi|297183972|gb|ADI20092.1| 16S RNA g1207 methylase rsmC [uncultured alpha proteobacterium
           EB080_L06A09]
          Length = 335

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 49/145 (33%), Gaps = 26/145 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSN 140
           +D A A  L  +         DLG G G +   LLK +   K    ++    ALE AK N
Sbjct: 174 IDKASALLLENLPNHLSGNGADLGAGWGYLSSELLKSNDKIKSICLIEADWNALECAKLN 233

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
                  +R +   +D     +  +D IV NPP+  +          R  +P        
Sbjct: 234 I----NDKRAEFEWADATQYKKTKYDFIVMNPPFHLT----------RKAEP-------- 271

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 ++     +  L   G   +
Sbjct: 272 ---DIGKSFIKQANELLLPKGQLWM 293


>gi|291245178|ref|XP_002742468.1| PREDICTED: methyltransferase 10 domain containing-like, partial
           [Saccoglossus kowalevskii]
          Length = 236

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 27/173 (15%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +NV + +  D   P    R      V+  +  +     +   +  +D+GTG   +   L 
Sbjct: 58  FNVEIDVPLDRLVPTLPLRLNYIHWVEDLIRDN--GAYRGSHIHGIDIGTGASCIYPLLG 115

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS---DWFSSV-----EGLFDVI 168
                +     +     +  AK N   N ++++   ++S   D FS V        +D  
Sbjct: 116 ARLNEWHITATETDPVNVFYAKENIEKNNMNDKIKVIESSEDDIFSQVFEDNERQCYDFS 175

Query: 169 VSNPPYIESVIVD-------CLGLEVRDF----DPRISLDGGIDGLSHYRTIA 210
           + NPP+  S++             E +      +P   ++GG   +   R I 
Sbjct: 176 MCNPPFYGSLLEAQGFFSRSEKRPEPKSSSTAAEPECVVEGGE--VEFVRKII 226


>gi|284920712|emb|CBG33775.1| 23S rRNA (uracil-5-)-methyltransferase [Escherichia coli 042]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVNHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIV-SNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G    +V  NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPGLVLVNPP 309


>gi|282892425|ref|ZP_06300775.1| hypothetical protein pah_c253o052 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497827|gb|EFB40188.1| hypothetical protein pah_c253o052 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 484

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 19/136 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           +   +S   F  +P T    +   + +L        + + DL  GTG + + L K +   
Sbjct: 301 LEFNISPSAF-FQPNTRQ-AERLYSLALQLSSISTPITVYDLYCGTGTLSICLSKFAK-- 356

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLF---DVIVSNPPY 174
             VGV+I  +A+  A+SNA  NG S     L       +     E LF   D++V +PP 
Sbjct: 357 TVVGVEICPEAVLDARSNAAKNGCS-NVHFLCGAVHEQLTKIIEENLFPLPDLVVVDPP- 414

Query: 175 IESVIVDCLGLEVRDF 190
                   L       
Sbjct: 415 -----RAGLDPHALQH 425


>gi|256021020|ref|ZP_05434885.1| 23S rRNA methyluridine methyltransferase [Shigella sp. D9]
 gi|332282247|ref|ZP_08394660.1| 23S rRNA methyluridine methyltransferase [Shigella sp. D9]
 gi|332104599|gb|EGJ07945.1| 23S rRNA methyluridine methyltransferase [Shigella sp. D9]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|195977713|ref|YP_002122957.1| putative methylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974418|gb|ACG61944.1| putative methylase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 179

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 8/132 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +F    L         RP ++ +  +      P  +     R+LDL  G+G + +     
Sbjct: 7   EFGGRPLKTLEG-KTTRPTSDKVRGAIFNMIGPYFKGG---RVLDLFAGSGGLSIE-AIS 61

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVSNPPYI 175
               + V V+   KA  I ++N      S++F  L+ D    F  + G FDV+  +PPY 
Sbjct: 62  RGMSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAERAFDHLSGQFDVVFLDPPYA 121

Query: 176 ESVIVDCLGLEV 187
           +  IV  +   V
Sbjct: 122 KETIVANIEALV 133


>gi|15964832|ref|NP_385185.1| putative cyclopropane-fatty-acyl-phospholipid synthase protein
           [Sinorhizobium meliloti 1021]
 gi|307300902|ref|ZP_07580671.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti BL225C]
 gi|307320719|ref|ZP_07600131.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti AK83]
 gi|15074011|emb|CAC45658.1| Putative cyclopropane-fatty-acyl-phospholipid synthase
           [Sinorhizobium meliloti 1021]
 gi|306893646|gb|EFN24420.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti AK83]
 gi|306903857|gb|EFN34443.1| Cyclopropane-fatty-acyl-phospholipid synthase [Sinorhizobium
           meliloti BL225C]
          Length = 418

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
               ++L++G+G G + + L  ES   +  G+ +S + L++++  A   G+S+R      
Sbjct: 172 EPGQKVLEVGSGWGGMAMYLA-ESSGVEVTGITLSEEQLKVSRERAARRGLSDRVRFELQ 230

Query: 156 DWFSSVEGLFDVIVS 170
           D+ +     FD IVS
Sbjct: 231 DYRTMQGRQFDRIVS 245


>gi|294813040|ref|ZP_06771683.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|294325639|gb|EFG07282.1| Cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 441

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +  +R+LD+G G G++ L   +E    +  GV +S +  + A+      G
Sbjct: 197 LDLVCRKLDLQQGMRLLDVGCGWGSMALHAAREY-GVRVTGVTLSREQADHARKRVADAG 255

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D + S            +   V              G + 
Sbjct: 256 LADRVEIRVQDYRDVRDGPYDAVSS----------IGMAEHV--------------GAAP 291

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 292 YLEYARQLRALLRPGGRLL 310


>gi|260771269|ref|ZP_05880196.1| 23S rRNA (Uracil-5-)-methyltransferase rumA [Vibrio furnissii CIP
           102972]
 gi|260613866|gb|EEX39058.1| 23S rRNA (Uracil-5-)-methyltransferase rumA [Vibrio furnissii CIP
           102972]
          Length = 440

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 25/169 (14%)

Query: 22  VIVDPDSVLDDRQRFFLTNA-------IVRSLKHESIHRILGWRDFYN-----VRLTLSS 69
           +++   + L  + +  L          + R    ES+  + G    Y      +    S+
Sbjct: 210 LVLRHLAPLAAKDQSALEAFAAQHDLTLYRMPSSESLEHVCGEGAVYGEVGVTIPFLPSN 269

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
                +P  + +V  ALA+     E+    R+LDL  G G   L L K +   + VGV+ 
Sbjct: 270 FIQVNQPVNQAMVAQALAWLAVTPEE----RVLDLFCGLGNFSLPLAKLAK--QVVGVEG 323

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNP 172
               +E AK+NA  N +       Q++    + G       FD ++ +P
Sbjct: 324 IDDMVERAKANATRNDL-HNVSFYQANLEQDMTGETWAAEKFDKVLLDP 371


>gi|257438106|ref|ZP_05613861.1| RNA methyltransferase, RsmD family [Faecalibacterium prausnitzii
           A2-165]
 gi|257199437|gb|EEU97721.1| RNA methyltransferase, RsmD family [Faecalibacterium prausnitzii
           A2-165]
          Length = 189

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 58/176 (32%), Gaps = 36/176 (20%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G       RL     T   RP  + + ++  +     +      R+LDL  G+G + +
Sbjct: 4   IAGEA--RGRRLEALPGTEITRPTMDQVKEAMFSIVQFDL---PGARVLDLYAGSGQLGI 58

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVS 170
                    + V +D + +A+ I   N    GV +R      +   + S+    FD+++ 
Sbjct: 59  E-ALSRGAARCVFLDENREAVNIVMKNCKNCGVFDRSRVNIGEAARYLSACHEQFDIVLL 117

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           +PP+                                  I  GV + L   G+   E
Sbjct: 118 DPPFHTGT---------------------------LEKILPGVDKCLAPGGIVICE 146


>gi|302889030|ref|XP_003043401.1| hypothetical protein NECHADRAFT_105674 [Nectria haematococca mpVI
           77-13-4]
 gi|256724317|gb|EEU37688.1| hypothetical protein NECHADRAFT_105674 [Nectria haematococca mpVI
           77-13-4]
          Length = 341

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 51/141 (36%), Gaps = 37/141 (26%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL   L R   ++  R+LDLGTGTG   +    E+P  + +G D+S              
Sbjct: 91  ALGGELHRSPVKEPQRVLDLGTGTGVWAMDFADENPGAEVIGTDLSP------------- 137

Query: 145 GVSERFDTLQSDWFSSVEGLF--DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                   +Q  W +    LF  D   +  PY  S   D +    R+ +  I+ D     
Sbjct: 138 --------IQPGW-TPPNCLFEVDDFEAEWPY--SRPFDFIHG--RELEGCIADD----- 179

Query: 203 LSHYRTIADGVSRHLNKDGLC 223
                 +     +HLN  G  
Sbjct: 180 ----DKLFAQAFKHLNPGGYF 196


>gi|213052548|ref|ZP_03345426.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
          Length = 158

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G GTG+V +    + P  +   ++ +  AL +   N          D L  +   +
Sbjct: 1   MIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACG-NIDILPGEAPMT 59

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  D +                             GG  G  H   + D    HL+  
Sbjct: 60  ITGKADAVFM---------------------------GGSGG--HLTALIDWAMGHLHPG 90

Query: 221 GLCSV 225
           G   +
Sbjct: 91  GRLVM 95


>gi|158318305|ref|YP_001510813.1| methyltransferase type 12 [Frankia sp. EAN1pec]
 gi|158113710|gb|ABW15907.1| Methyltransferase type 12 [Frankia sp. EAN1pec]
          Length = 416

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
             R+ D+G G G   +AL +  P     G D   +++ +A+ NA    V++R   
Sbjct: 232 GARVADIGCGAGWSSIALARAYPGVTVDGFDPDTESVRLAERNAAAFEVTDRVTF 286


>gi|323693629|ref|ZP_08107829.1| RNA methyltransferase [Clostridium symbiosum WAL-14673]
 gi|323502320|gb|EGB18182.1| RNA methyltransferase [Clostridium symbiosum WAL-14673]
          Length = 461

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   F+     ++  +S  +F    +T  L  +     +   + +     + DL +GT
Sbjct: 267 LYGKDYFFEELLGLKFRISPFSFF---QTNSLGAEVLYEKTREYVGETKGKVVFDLYSGT 323

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           G +   L    P   K VGV+I  +A+E AK NA  NG+ +  + +  D    V+ L D 
Sbjct: 324 GTIAQILA---PVAEKVVGVEIVKEAVEAAKENARLNGL-DNCEFIAGDVLKVVDELTDK 379

Query: 168 ---IVSNPP 173
              IV +PP
Sbjct: 380 PELIVLDPP 388


>gi|309790457|ref|ZP_07685018.1| ribosomal protein L11 methyltransferase [Oscillochloris trichoides
           DG6]
 gi|308227505|gb|EFO81172.1| ribosomal protein L11 methyltransferase [Oscillochloris trichoides
           DG6]
          Length = 322

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 8/166 (4%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L     +  +R LDLGTG+G + +A  K       + +D    A ++A  N   N 
Sbjct: 152 LCLRLLETYAQPGLRTLDLGTGSGILAIAAAKLGAGP-VLAIDNDPVAAQVAAENVRINQ 210

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +       +    +         +S     +               P+ +L         
Sbjct: 211 IEHVVTAGEGSLGAG--QHMGHWLSGDFGEDHPADASTPPTT----PQFNLIAANLIAKV 264

Query: 206 YRTIADGVSRHLNKDGLCS-VEIGYNQKVDVVRIFESRKLFLVNAF 250
              +A+ ++  L   G+     I   ++ DVV  FE+  L  +   
Sbjct: 265 LVILANDLAAALMPGGILVSSGIIDTKEADVVAAFEAAGLRQLERH 310


>gi|331672398|ref|ZP_08373189.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA280]
 gi|331070593|gb|EGI41957.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli
           TA280]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|301020623|ref|ZP_07184698.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           69-1]
 gi|300398599|gb|EFJ82137.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           69-1]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|293414137|ref|ZP_06656786.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli B185]
 gi|291434195|gb|EFF07168.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli B185]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|291242043|ref|XP_002740918.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 347

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 11/116 (9%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
                 D+G G+G     L +  P  K  GVD+S KA+  A  N            +Q D
Sbjct: 158 PGAVACDVGCGSGIPVCTLAQLYPACKFYGVDLSEKAI-TAAQNRALEMKLTNVTFIQCD 216

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                      FD++V+      +V+ D    ++   +    L    DG+     I
Sbjct: 217 ASSMAEDWIEKFDIVVT-----MAVVHDLPRPDLVHHEIMRIL--KDDGIYIMEDI 265


>gi|290559022|gb|EFD92401.1| Methyltransferase type 11 [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 246

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 35/138 (25%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ-S 155
              RIL+LG G G V +AL KE       G+DIS K +  A  NA + GV+  F  +  S
Sbjct: 50  KKKRILELGCGAGQVSIALAKEGGVC--TGIDISEKQIAKAIKNAKSEGVNVNFVIMPFS 107

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY--RTIADGV 213
                ++  FD+++S                       ++L         Y  + +   V
Sbjct: 108 SIKKLLKTKFDIVISV----------------------MALQ------YCYNLKKLFADV 139

Query: 214 SRHLNKDGLCSV--EIGY 229
           +  LN +GL     E  +
Sbjct: 140 NNLLNANGLFIFSLEHPF 157


>gi|229140852|ref|ZP_04269397.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST26]
 gi|228642642|gb|EEK98928.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST26]
          Length = 257

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 31/141 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+    R      +RIL+LG GTG V   L    P  +   +D +   + +A+    T  
Sbjct: 21  LSTLNRRYSANSSIRILELGCGTGYVTEQLSNLFPKAQITAIDFAESMIAVAR----TRQ 76

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                     D     +E  +DVI+SN  +                            L+
Sbjct: 77  NVNNVTFYCEDIERLRLEETYDVIISNATF--------------------------QWLN 110

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
             + +   + RHL+ +G+   
Sbjct: 111 DLKQVIRNLFRHLSIEGILLF 131


>gi|297565097|ref|YP_003684069.1| trans-aconitate 2-methyltransferase [Meiothermus silvanus DSM 9946]
 gi|296849546|gb|ADH62561.1| Trans-aconitate 2-methyltransferase [Meiothermus silvanus DSM 9946]
          Length = 253

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 36/148 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
               L  ++ +  VR +DLG GTG +   L    P  +  G+D S   L         +G
Sbjct: 19  FDDLLKLVKVKPGVRAIDLGCGTGELTRKLADTLPDSEVTGLDSSASML-------ARSG 71

Query: 146 VSER--FDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           +  R     +Q D  + ++G +D+I SN                       +L      L
Sbjct: 72  LHVRPGLRFIQGDI-AELKGSYDLIFSNA----------------------AL----QWL 104

Query: 204 SHYRTIADGVSRHLNKDGLCSVEIGYNQ 231
             +  +   + RHLN  G   V++  N 
Sbjct: 105 PDHWRLFPKLWRHLNPGGQLVVQMPANH 132


>gi|206976288|ref|ZP_03237196.1| putative biotin synthesis protein BioC [Bacillus cereus H3081.97]
 gi|217961609|ref|YP_002340179.1| putative biotin synthesis protein BioC [Bacillus cereus AH187]
 gi|222097565|ref|YP_002531622.1| biotin synthesis protein [Bacillus cereus Q1]
 gi|206745484|gb|EDZ56883.1| putative biotin synthesis protein BioC [Bacillus cereus H3081.97]
 gi|217063451|gb|ACJ77701.1| putative biotin synthesis protein BioC [Bacillus cereus AH187]
 gi|221241623|gb|ACM14333.1| possible biotin synthesis protein [Bacillus cereus Q1]
          Length = 269

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 31/141 (21%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+    R      +RIL+LG GTG V   L    P  +   +D +   + +A+    T  
Sbjct: 33  LSTLNRRYSANSSIRILELGCGTGYVTEQLSNLFPKAQITAIDFAESMIAVAR----TRQ 88

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
                     D     +E  +DVI+SN  +                            L+
Sbjct: 89  NVNNVTFYCEDIERLRLEETYDVIISNATF--------------------------QWLN 122

Query: 205 HYRTIADGVSRHLNKDGLCSV 225
             + +   + RHL+ +G+   
Sbjct: 123 DLKQVIRNLFRHLSIEGILLF 143


>gi|26246882|ref|NP_752922.1| 23S rRNA methyluridine methyltransferase [Escherichia coli CFT073]
 gi|227884177|ref|ZP_04001982.1| 23S rRNA methyluridine methyltransferase [Escherichia coli 83972]
 gi|300993463|ref|ZP_07180405.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           45-1]
 gi|301051213|ref|ZP_07198042.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           185-1]
 gi|50401587|sp|Q8FJE7|RUMB_ECOL6 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|26107282|gb|AAN79465.1|AE016758_69 Hypothetical RNA methyltransferase ybjF [Escherichia coli CFT073]
 gi|227838929|gb|EEJ49395.1| 23S rRNA methyluridine methyltransferase [Escherichia coli 83972]
 gi|300297120|gb|EFJ53505.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           185-1]
 gi|300406577|gb|EFJ90115.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           45-1]
 gi|307552702|gb|ADN45477.1| 23S rRNA uracil-5-methyltransferase [Escherichia coli ABU 83972]
 gi|315292534|gb|EFU51886.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           153-1]
          Length = 375

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|18977199|ref|NP_578556.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
 gi|50401623|sp|Q8U2K7|Y827_PYRFU RecName: Full=Uncharacterized RNA methyltransferase PF0827
 gi|18892856|gb|AAL80951.1| putative RNA methyltransferase [Pyrococcus furiosus DSM 3638]
          Length = 409

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 18/133 (13%)

Query: 47  KHESIHRILGWRDF-----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVR 100
             E IH  LG ++F     + ++  L    F  +  +      AL   L  +E   D  +
Sbjct: 221 SGEPIH--LGEKEFISEKIFGIKYLLRPGIF-FQTNSY-----ALPLLLKAVEGFLDGSK 272

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL +G G   L L K+   F  VGV+I+  A+E+AK +A  N ++  F   +++   +
Sbjct: 273 VLDLYSGIGTFSLYLTKK--GFNVVGVEINKTAVEVAKLSAELNSLNVEFKAKRAEE-EN 329

Query: 161 VEGLFDVIVSNPP 173
           +EG +D ++ +PP
Sbjct: 330 IEG-YDALILDPP 341


>gi|332363041|gb|EGJ40828.1| O-methyltransferase [Streptococcus sanguinis SK355]
          Length = 227

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVS 170
           L+    D   ++E  +D++  
Sbjct: 124 LEGDAMDLLETLEDSYDLVFM 144


>gi|332361671|gb|EGJ39475.1| O-methyltransferase [Streptococcus sanguinis SK1056]
          Length = 227

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFED 185


>gi|317009566|gb|ADU80146.1| adenine specific DNA methyltransferase [Helicobacter pylori India7]
          Length = 383

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K +   +L+   G G    + LK    
Sbjct: 7   NLDIKTLGQVFTPKK----IVDFMLTL------KHNHGSVLEPSAGDG----SFLKRLKK 52

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 53  A--VGIEIDPKICP---KNA-----------LCIDFFDYPLENQFDTIIGNPPYVKHKDI 96

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                E   +    SL      L  Y    +   +HL   G        +
Sbjct: 97  APSTKEKLHY----SLFDERSNL--YLFFIEKAIKHLKPKGELIFITPRD 140


>gi|206579475|ref|YP_002239393.1| hypothetical protein KPK_3573 [Klebsiella pneumoniae 342]
 gi|206568533|gb|ACI10309.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 423

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+L+  + TG   ++        +   VD S +AL++A+ N   NG+   + + ++ D F
Sbjct: 250 RVLNCFSYTGGFAVS-ALMGGCRQVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVF 308

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FDVIV +PP         +              G   G   Y+ I   
Sbjct: 309 KLLRKYRDQGEKFDVIVMDPPKFVENKSQLM--------------GACRG---YKDINML 351

Query: 213 VSRHLNKDGLCS 224
             + LN  G+  
Sbjct: 352 AIQLLNPGGVLL 363


>gi|159796251|gb|ABX00619.1| LmbW [Streptomyces lincolnensis]
          Length = 350

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  R   R+LD+G G G + +      P   G+G+DI   A+E+A+  A   GV++R 
Sbjct: 165 EAMRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRV 224

Query: 151 DTLQSDWFSSVEGL 164
           + +  D F+  +  
Sbjct: 225 EFVVGDAFAPADWP 238


>gi|84489411|ref|YP_447643.1| hypothetical protein Msp_0602 [Methanosphaera stadtmanae DSM 3091]
 gi|84372730|gb|ABC57000.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 225

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +   +  I   +  RILDLG GTG +   +L+  P  K    D+S K +EIAK     
Sbjct: 28  QMIEALINAIPDNESPRILDLGCGTGNITKKVLERFPNGKVTCFDLSEKMIEIAKE---K 84

Query: 144 NGVSERFDTLQSDW-FSSVEGLFDVIVS 170
               +  + +  D+    +   +D I+S
Sbjct: 85  LSDYDNIEYVIGDFTIIDIIDKYDAIIS 112


>gi|62179445|ref|YP_215862.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161614854|ref|YP_001588819.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|224582732|ref|YP_002636530.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|75484288|sp|Q57R80|RUMB_SALCH RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|189045736|sp|A9N824|RUMB_SALPB RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|254766928|sp|C0PXN9|RUMB_SALPC RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|62127078|gb|AAX64781.1| putative tRNA (uracil-5-)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|161364218|gb|ABX67986.1| hypothetical protein SPAB_02607 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|224467259|gb|ACN45089.1| 23S rRNA (uracil-5-)-methyltransferase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322713914|gb|EFZ05485.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 376

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +V L +   +F     T  +     A +   + +  V  + DL  G G   L     +
Sbjct: 198 FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGFGLHCA--T 253

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPP 173
           P  +  G++I+ +A+  AK +A   G++   F  L S  F+  +G   D+++ NPP
Sbjct: 254 PQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGETPDLVLVNPP 309


>gi|325204818|gb|ADZ00272.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M01-240355]
          Length = 295

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|313901649|ref|ZP_07835084.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
 gi|313468091|gb|EFR63570.1| ubiquinone/menaquinone biosynthesis methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
          Length = 251

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 30/137 (21%)

Query: 97  DVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           D  R+LD+  GTG +   L +   P  +  G+D S   L +A+      G+S R + +Q 
Sbjct: 58  DGARVLDVACGTGEITAMLARRVGPAGRVTGLDFSPGMLAVARHRLEALGLSGRVELVQG 117

Query: 156 DWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
           D        G FD++              +G  +R+         G+D     R +A+  
Sbjct: 118 DALDMPFAAGEFDLV-------------TMGFALRN-------VAGLD-----RALAEMA 152

Query: 214 SRHLNKDG-LCSVEIGY 229
            R     G +  +E+ +
Sbjct: 153 -RVTRPGGRVLILELSH 168


>gi|317011233|gb|ADU84980.1| cyclopropane fatty acid synthase [Helicobacter pylori SouthAfrica7]
          Length = 389

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 72/197 (36%), Gaps = 36/197 (18%)

Query: 39  TNAIVRSLK---HESIHRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSL 90
             AI + LK   + S H  LG  DFY++     L+ S   F+   +T        L  +L
Sbjct: 96  AKAIQKPLKESSNISKHYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHTAQLQKLDHTL 154

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            ++  +   ++LD+G G G + +   +E    + +G+ IS +  + A       G+ +R 
Sbjct: 155 KKLHLKQGEKLLDIGCGWGYLSIKAAQEY-GAEVMGITISNEQYKQANKRVQELGLEDRV 213

Query: 151 DT--LQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
               L           FD +VS                V  F+  +    G D L  Y  
Sbjct: 214 TIKLLNYQDLDGRLYRFDKVVS----------------VGMFE-HV----GKDNLPFY-- 250

Query: 209 IADGVSRHLNKDGLCSV 225
               V   L   G+  +
Sbjct: 251 -FKKVKEVLKTGGMFLL 266


>gi|148255208|ref|YP_001239793.1| cyclopropane-fatty-acyl-phospholipid synthase [Bradyrhizobium sp.
           BTAi1]
 gi|146407381|gb|ABQ35887.1| cyclopropane-fatty-acyl-phospholipid synthase [Bradyrhizobium sp.
           BTAi1]
          Length = 366

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 27/136 (19%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           RILD+G G G + L L   +      GV +S + L++A + A    +S     L  D + 
Sbjct: 124 RILDIGCGWGGLGLYLAAMT-GADVTGVTLSNEQLQVANARAAERNLSGSARFLLQD-YR 181

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
            V G FD IVS                V  F+          G++ Y T     +  L+ 
Sbjct: 182 DVPGTFDRIVS----------------VGMFE--------HVGVAFYDTFFRRCAELLDD 217

Query: 220 DGLCSVE-IGYNQKVD 234
           DG+  +  IG ++  D
Sbjct: 218 DGIMVLHSIGRSEGPD 233


>gi|6572599|gb|AAF17314.1|AF139332_1 microcystin synthetase [Microcystis aeruginosa UTEX 'LB 2664']
          Length = 440

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 86/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   ++  L D Q     +   +         + I  I+GW  
Sbjct: 8   SQTLIAYVVGQSQEGELLTTSENGQLFDEQIGQWQSLYNQIYSQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPAAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPKL-EQVRLLHSTADKFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|304439745|ref|ZP_07399643.1| possible SAM-dependent methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371732|gb|EFM25340.1| possible SAM-dependent methyltransferase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 229

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 24/162 (14%)

Query: 100 RILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW- 157
           ++LD G G G + L  L +          +I    L         N +      + S   
Sbjct: 39  KVLDAGCGNGILSLRVLNRAREVVSVDMEEIYTDNLN---RTIELNNLK-NIKVVNSKIE 94

Query: 158 -FSSVEGLFDVIVSNPPYI-ESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 G FD I++NPPY  +   ++      R  +              Y      +S+
Sbjct: 95  NLKGYSGYFDTIITNPPYFTDRTAIEVSEGRERHTE------------DIY-IFIKALSK 141

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVN---AFKDYG 254
           +L   G   +     +  ++    +   L++       KD  
Sbjct: 142 YLKYGGRMYMVFPSLRLQEIAVYLKELNLYIKRIKFIKKDIS 183


>gi|238913400|ref|ZP_04657237.1| 23S rRNA methyluridine methyltransferase [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
          Length = 376

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 6/116 (5%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F +V L +   +F     T  +     A +   + +  V  + DL  G G   L     +
Sbjct: 198 FNDVPLWIRPQSFFQTNPT--VASRLYATARDWVGQLPVRHMWDLFCGVGGFGLHCA--T 253

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-LFDVIVSNPP 173
           P  +  G++I+ +A+  AK +A   G++   F  L S  F+  +G   D+++ NPP
Sbjct: 254 PQMQLTGIEIAPEAIACAKQSAAELGLTRLHFQALDSTQFAIAQGETPDLVLVNPP 309


>gi|9454482|gb|AAF87840.1|AF283672_2 modification methyltransferase Hpy8I [Helicobacter pylori]
          Length = 379

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 37/170 (21%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           N+ +      F P+     +VD  L        K++   +L+   G G    + LK    
Sbjct: 3   NLDIKTLGQVFTPKK----IVDFMLTL------KQNQGSVLEPSAGDG----SFLKRLKK 48

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIV 180
              VG++I  K       NA           L  D+F   +E  FD I+ NPPY++   +
Sbjct: 49  A--VGIEIDPKICP---KNA-----------LCMDFFDYPLENQFDTIIGNPPYVKHKDI 92

Query: 181 DCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
                +   +    SL      L  Y    +   +HL   G        +
Sbjct: 93  ALSTKDKLHY----SLFDERSNL--YLFFIEKAIKHLKPQGELIFITPRD 136


>gi|323484926|ref|ZP_08090281.1| hypothetical protein HMPREF9474_02032 [Clostridium symbiosum
           WAL-14163]
 gi|323401807|gb|EGA94150.1| hypothetical protein HMPREF9474_02032 [Clostridium symbiosum
           WAL-14163]
          Length = 457

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 16/129 (12%)

Query: 54  ILGWRDFY----NVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGT 108
           + G   F+     ++  +S  +F    +T  L  +     +   + +     + DL +GT
Sbjct: 267 LYGKDYFFEELLGLKFRISPFSFF---QTNSLGAEVLYEKTREYVGETKGKVVFDLYSGT 323

Query: 109 GAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
           G +   L    P   K VGV+I  +A+E AK NA  NG+ +  + +  D    V+ L D 
Sbjct: 324 GTIAQILA---PVAEKVVGVEIVKEAVEAAKENARLNGL-DNCEFIAGDVLKVVDELTDK 379

Query: 168 ---IVSNPP 173
              IV +PP
Sbjct: 380 PELIVLDPP 388


>gi|293352044|ref|XP_002727922.1| PREDICTED: N6-DNA methyltransferase A isoform 1 [Rattus norvegicus]
          Length = 186

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 58/191 (30%), Gaps = 36/191 (18%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGV 127
           SD +EP  +T L      A      E   V   L++G G+G V   L     P    +  
Sbjct: 20  SDVYEPAEDTFL---LLDALEAAAAELAGVELCLEVGAGSGVVSAFLASMIGPQALYMCT 76

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI+ KA       A  N V  +                                 +   V
Sbjct: 77  DINPKAAACTLETARCNRVHLQ-------------------------------PVITDLV 105

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQKVDVVRIFESRKLFL 246
                  +  GG +G           S+ L+  GL  +  I  N   ++ +I ++R L  
Sbjct: 106 GSHGIEAAWAGGRNGREVMDRFFPLASQLLSPRGLFYLVTIKENNPEEIFKIMKTRGLQG 165

Query: 247 VNAFKDYGGND 257
             A     G +
Sbjct: 166 TTALCRQAGQE 176


>gi|268323570|emb|CBH37158.1| hypothetical protein, containing methyltransferase domain
           [uncultured archaeon]
          Length = 225

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG G G + +   K     + VG+D   +A+E+A++N+   GV+   +  + D    
Sbjct: 79  VYDLGCGNGILGIG-AKLLGAKEVVGIDSDLRAIEVARANSERIGVA--VEFKRCDV-RD 134

Query: 161 VEGLFDVIVSNPPYIESVI 179
           VEG  D +V NPP+     
Sbjct: 135 VEGTGDTVVMNPPFGAQRE 153


>gi|271500850|ref|YP_003333875.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Dickeya dadantii
           Ech586]
 gi|270344405|gb|ACZ77170.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Dickeya dadantii
           Ech586]
          Length = 376

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 16/149 (10%)

Query: 50  SIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGT 108
               +     F  V L +   +F    +T  +V +AL   +   +    +  + DL  G 
Sbjct: 190 PAQAL--EERFNQVPLYIRPQSFF---QTNPVVAAALYDTARQWVSTLPIRSLWDLFCGV 244

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGL-FD 166
           G   L      P     G++IS +A+  A+ +A   G+ +  F  L S  F+  E    D
Sbjct: 245 GGFGLHCA--GPDRVLTGIEISPEAIACAQHSATLLGLENVSFAALDSTRFAVGEMQTPD 302

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +++ NPP         +G E+ D+  R++
Sbjct: 303 LVIVNPP------RRGIGAELCDYLSRMA 325


>gi|229826831|ref|ZP_04452900.1| hypothetical protein GCWU000182_02210 [Abiotrophia defectiva ATCC
           49176]
 gi|229788986|gb|EEP25100.1| hypothetical protein GCWU000182_02210 [Abiotrophia defectiva ATCC
           49176]
          Length = 467

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS 159
           + DL  G G + L L K++   +  GV+I   A+E AK NA  NG+    F   +++  +
Sbjct: 325 VWDLYCGIGTISLFLAKKAK--EVYGVEIVPAAVENAKENAKLNGIENAYFTVGKAEDEA 382

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
                 DVIV +PP       + L   + ++ P 
Sbjct: 383 KKLPKPDVIVVDPP--RKGCDEKLLETIMNYKPE 414


>gi|121634223|ref|YP_974468.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           FAM18]
 gi|166223424|sp|A1KS36|PRMA_NEIMF RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|120865929|emb|CAM09666.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis FAM18]
 gi|261393202|emb|CAX50821.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria
           meningitidis 8013]
 gi|325131505|gb|EGC54212.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           M6190]
 gi|325137551|gb|EGC60133.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           ES14902]
 gi|325141598|gb|EGC64063.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           961-5945]
 gi|325197639|gb|ADY93095.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           G2136]
          Length = 295

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|78356477|ref|YP_387926.1| 50S ribosomal protein L11P methyltransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218882|gb|ABB38231.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 283

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 85/267 (31%), Gaps = 67/267 (25%)

Query: 15  TGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHR---ILGWRDFY-----NVRLT 66
           TG S  +V  D     +D      +      ++ ES+ +   +  WRD++       R  
Sbjct: 38  TGESLFRVYTDNPQFCEDLVGEVESRVPEARVERESVPQQDWVAAWRDYFTPVEAGSRFM 97

Query: 67  L--------------SSDTFEPR-------PETELLVDSALAFSLPRIEKRDVVRILDLG 105
           +                   EP+         T  L   A++    +      +R LDLG
Sbjct: 98  VIAPWMHGEVDLKDRMPIVIEPKTAFGTGHHPTTALCLGAVSALADKGRISAGMRFLDLG 157

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF 165
           TG+G + +          GVG DI   A+E    N   N VS++F+       +     +
Sbjct: 158 TGSGILGIGCAML--GLSGVGSDIDLLAVENTTENKEINNVSDKFEVRLGSVEAVQGEQY 215

Query: 166 DVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-- 223
           D++++N                      ++           + +A  +   +   G    
Sbjct: 216 DLVLAN---------------------ILA--------QPLKELAQDIVALMRPGGCLVL 246

Query: 224 --SVEIGYNQKVDVVRIFESRKLFLVN 248
              +E+   Q   V  ++ +  L    
Sbjct: 247 SGLLEL---QADGVEAVYTALGLPQAR 270


>gi|293392481|ref|ZP_06636801.1| cyclopropane-fatty-acyl-phospholipid synthase [Serratia odorifera
           DSM 4582]
 gi|291424883|gb|EFE98092.1| cyclopropane-fatty-acyl-phospholipid synthase [Serratia odorifera
           DSM 4582]
          Length = 430

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 80/238 (33%), Gaps = 54/238 (22%)

Query: 9   SFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLS 68
               R+       +     S L D  R      + R  +  +    +G ++ Y++   L 
Sbjct: 121 ILFTRIL---RAGIDERLPSSLTDIARIAYARLVNRQSRKRAWQ--VG-KEHYDIGNDLF 174

Query: 69  SDTFEPRP--------ETELLVDSA---LAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           S   +P          + + L  +    L     ++  +  + +LD+G G G +      
Sbjct: 175 SQMLDPYMQYSCGYWKDADTLQQAQQNKLKMICEKLRLQPGMSLLDIGCGWGGLA-QYAA 233

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIES 177
           E    K  GV IS +  ++A+            + L  D +  +   FD IVS       
Sbjct: 234 EQYGVKVHGVTISAEQQKMAQQRCAGL----EVEILLQD-YRDLHRQFDRIVS------- 281

Query: 178 VIVDCLGLEVRDFD---PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IGYNQ 231
                    V  F+   P+            Y T  +  +R+L  +GL  +  IG NQ
Sbjct: 282 ---------VGMFEHVGPKN-----------YDTYFNVAARNLKPNGLFLLHTIGSNQ 319


>gi|255030523|ref|ZP_05302474.1| cobalt-precorrin-6Y C(15)-methyltransferase [Listeria monocytogenes
           LO28]
          Length = 161

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 34/133 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R   ++LD+G GTG+V L +    P      ++ +  A+++ K N    G+ E    +++
Sbjct: 2   RSQKKLLDVGAGTGSVGLQVACNFPKIHVTAIERNPDAVDLIKQNQAKFGL-ENIAVIEA 60

Query: 156 DWFSSVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADG 212
                +     FD I                             GG  G L+    I D 
Sbjct: 61  YAPIELPEKETFDAI---------------------------FIGGSGGNLTD---IIDW 90

Query: 213 VSRHLNKDGLCSV 225
              HL   G   +
Sbjct: 91  SLAHLIPGGRLVL 103


>gi|229083613|ref|ZP_04215941.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44]
 gi|228699703|gb|EEL52360.1| Uncharacterized RNA methyltransferase [Bacillus cereus Rock3-44]
          Length = 465

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 19/131 (14%)

Query: 52  HRILGWRDF-YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             I    DF  +++  +S+ +F      +T++L D AL ++    +      ++D   G 
Sbjct: 277 EYIY---DFIGDIKFAISARSFYQVNPEQTKVLYDKALEYA----KLDGNETVIDAYCGI 329

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVE 162
           G++ L L +++   K  GV+I  +A+E AK NA  N ++         + +  +W+    
Sbjct: 330 GSISLFLAQKAK--KVYGVEIVPEAIEDAKRNAELNNMTNAEFAVGEAEVVIPNWYKE-G 386

Query: 163 GLFDVIVSNPP 173
            + D IV +PP
Sbjct: 387 IIADTIVVDPP 397


>gi|198435713|ref|XP_002131256.1| PREDICTED: similar to hepatocellular carcinoma-associated antigen
           137 [Ciona intestinalis]
          Length = 787

 Score = 55.5 bits (133), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 17/157 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS- 159
           I+D   G+G   +         K + +DI    LE AK NA   GV +R D +   +F  
Sbjct: 589 IVDAFCGSGGNAIQFA--FTCEKVLAIDIDPVKLENAKHNAAIYGVEDRIDFICGSFFDI 646

Query: 160 SVEGLFDVIVSNPPYIESVIVDC---LGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           +     D++  +PP+      +C      E+ DF        G    +  + I+D ++  
Sbjct: 647 APTLKADIVFLSPPWGGPEYTNCETYSIAEMGDF--------GTKAFTLAKNISDNIAFF 698

Query: 217 LNKDG---LCSVEIGYNQKVDVVRIFESRKLFLVNAF 250
           L ++          G   +V++ +   + K+  + A+
Sbjct: 699 LPRNSNVDELVCLAGPGNQVELEQNMLNNKIVTITAY 735


>gi|313892389|ref|ZP_07825981.1| putative 23S rRNA m5C1962 methyltransferase [Dialister
           microaerophilus UPII 345-E]
 gi|313119248|gb|EFR42448.1| putative 23S rRNA m5C1962 methyltransferase [Dialister
           microaerophilus UPII 345-E]
          Length = 404

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 26/135 (19%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
               +LD  T TGA  L   K         +DIS  A+++A  +A  N + E    +++D
Sbjct: 229 KGKNVLDCFTHTGAFALNAAKSGAKS-VTAIDISQHAVDMATHHAEINEL-ENMKVVKAD 286

Query: 157 WFS-------SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            F        + E  +D I+ +PP                     +  G       Y+ I
Sbjct: 287 VFDYLTEQDKNHEHKYDYIILDPPAFTKSGSTV----------HSAFRG-------YKEI 329

Query: 210 ADGVSRHLNKDGLCS 224
                + L + G  +
Sbjct: 330 NYRAMKLLPRGGYLA 344


>gi|302388260|ref|YP_003824082.1| RNA methyltransferase, TrmA family [Clostridium saccharolyticum
           WM1]
 gi|302198888|gb|ADL06459.1| RNA methyltransferase, TrmA family [Clostridium saccharolyticum
           WM1]
          Length = 454

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +     +L       V  + DL  G G + L L +++   K  GV+I  +A+E A+ NA 
Sbjct: 292 EKLYGTALAYAGLTGVETVWDLYCGIGTISLFLAQKAK--KVYGVEIVPQAIEDARENAR 349

Query: 143 TNGVSERFDTLQSDWFSSVEGLF-------DVIVSNPP 173
            NG+ +  +         +   +       DVIV +PP
Sbjct: 350 LNGL-DNVEFFVGKAEEVLPEQYEKHQVYADVIVVDPP 386


>gi|293401235|ref|ZP_06645379.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305361|gb|EFE46606.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 535

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
           +L     +    ++DL  G G + + L +++   K +G++I  +A+  A+ NA  NG+ +
Sbjct: 288 ALEFCNLKGNEIVIDLYCGVGTISMFLAQKAG--KVIGIEIVEQAVRDARENAALNGL-D 344

Query: 149 RFDTLQSDW------FSSVEGLFDVIVSNPP 173
             + + SD        S   G  DV+V +PP
Sbjct: 345 NVEFVCSDAAAYAKKMSEQGGRADVVVVDPP 375


>gi|218688641|ref|YP_002396853.1| 23S rRNA methyluridine methyltransferase [Escherichia coli ED1a]
 gi|254766927|sp|B7MQW3|RUMB_ECO81 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|218426205|emb|CAR07029.1| 23S rRNA m(5)U747 methyltransferase [Escherichia coli ED1a]
 gi|315299392|gb|EFU58644.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           16-3]
          Length = 375

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|158335166|ref|YP_001516338.1| UbiE/COQ5 family methlytransferase [Acaryochloris marina MBIC11017]
 gi|158305407|gb|ABW27024.1| methyltransferase, UbiE/COQ5 family, putative [Acaryochloris marina
           MBIC11017]
          Length = 280

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L   + +  +    RILDLG GTG++ L L    P  + +G+D+S   L  A+  + 
Sbjct: 86  EMNLRREVLKSIQGQPQRILDLGCGTGSMTLMLKATYPQAEVIGLDLSPYMLCHAQHKSQ 145

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
              ++  +    ++        FDVI         ++   +                   
Sbjct: 146 KAQLTIHWLHGLAEATDLKAHSFDVISIC------MVFHEMPP----------------- 182

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFES 241
               R +     R L   G   +  G          ++R+F  
Sbjct: 183 -RISRLVLQECRRLLKSGGQLIILDGNQNRLRHADWLIRLFRE 224


>gi|254852933|ref|ZP_05242281.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL R2-503]
 gi|300764344|ref|ZP_07074338.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N1-017]
 gi|258606271|gb|EEW18879.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL R2-503]
 gi|300514996|gb|EFK42049.1| precorrin-8W decarboxylase [Listeria monocytogenes FSL N1-017]
          Length = 189

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 34/129 (26%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
           ++LD+G GTG+V L +    P  +   ++ +  A+++ K N    G+ E    +++    
Sbjct: 34  KLLDVGAGTGSVGLQVACNFPEIQVTAIERNSDAVDLIKQNQAKFGL-ENVTVVEAYAPI 92

Query: 160 SVEGL--FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG-LSHYRTIADGVSRH 216
            +     FD I                             GG  G L+    I D    H
Sbjct: 93  ELPEKETFDAI---------------------------FIGGSGGNLTD---IIDWSLAH 122

Query: 217 LNKDGLCSV 225
           LN  G   +
Sbjct: 123 LNPGGGLVL 131


>gi|154149936|ref|YP_001403554.1| methyltransferase type 11 [Candidatus Methanoregula boonei 6A8]
 gi|153998488|gb|ABS54911.1| Methyltransferase type 11 [Methanoregula boonei 6A8]
          Length = 278

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 47/150 (31%), Gaps = 31/150 (20%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE-SPFFKGVGVDISCKALEIAKSN 140
           VD      L        + +LD+G G+G V   L K        +G+D    +LEIA+  
Sbjct: 29  VDDMTKRMLVDAGIGPGMHVLDVGCGSGDVSHLLAKLVGKEGHVIGIDRDGPSLEIARDR 88

Query: 141 AVTNGVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                +      +Q D    S   G FD  V+        ++  L   V           
Sbjct: 89  IRKLDLP-NITFIQRDICELSPEPGQFDAAVA------RRVIMYLPEPV----------- 130

Query: 199 GIDGLSHYRTIADGVSRHLNKDGLCSV-EI 227
                   R I+      L   G+ +  E 
Sbjct: 131 -----DAIRRISAT----LRPGGVVAFLEH 151


>gi|90419485|ref|ZP_01227395.1| cyclopropane fatty acid synthase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336422|gb|EAS50163.1| cyclopropane fatty acid synthase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 429

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 36/175 (20%)

Query: 59  DFYNVRLTLSSDT---FEPRPETELLVDSALAFSLPRIEK-----RDVVRILDLGTGTGA 110
           + Y++ L +       +  RP+  L  D A       I       R  ++ LD+G G G 
Sbjct: 131 ELYDLFLDVDRQYSCAYFDRPDAGL--DEAQLAKKRHIAAKLAFDRPGLKTLDIGCGWGG 188

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + L L +        G+ +S + L IA+S A   G+S+      +D +    G FD IVS
Sbjct: 189 MGLYLARHL-SADVTGITLSDEQLGIARSRADEAGLSDHLHFEIAD-YRDTAGPFDRIVS 246

Query: 171 NPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                           V  F+          G+  Y       +R L++DG+  +
Sbjct: 247 ----------------VGMFE--------HVGVDFYDDYFRQCARLLDEDGVMLL 277


>gi|282932148|ref|ZP_06337601.1| putatIve type i restriction enzyme hindviip m protein
           [Lactobacillus jensenii 208-1]
 gi|281303727|gb|EFA95876.1| putatIve type i restriction enzyme hindviip m protein
           [Lactobacillus jensenii 208-1]
          Length = 203

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 25/165 (15%)

Query: 39  TNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDV 98
             A  R +        L  + F +       + + PR   + LV+           +   
Sbjct: 44  KEAKERDILGRVYEYFL--QKFASNEKKNGGEFYTPRSVVKTLVEMV---------EPFK 92

Query: 99  VRILDLGTGTGAVCLALLK-------ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
             + D   G+G + +   +       +       G + +    ++AK N    G+   F 
Sbjct: 93  GTVYDPCCGSGGMFVQSEQFVQEHQGQIADLSVYGQESNPTTWKLAKLNLAIRGIDNNFG 152

Query: 152 TLQSDWFSSVEGL---FDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
             Q+D F++       FD I++NPP+     V   G E    DPR
Sbjct: 153 AHQADTFTNDLHKGTHFDYILANPPF----NVKKWGGEKLKDDPR 193


>gi|229047810|ref|ZP_04193390.1| Biotin biosynthesis protein BioC [Bacillus cereus AH676]
 gi|228723602|gb|EEL74967.1| Biotin biosynthesis protein BioC [Bacillus cereus AH676]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIERLRLEESYDVIISNAAF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|254463817|ref|ZP_05077228.1| methyltransferase, UbiE/COQ5 family [Rhodobacterales bacterium Y4I]
 gi|206684725|gb|EDZ45207.1| methyltransferase, UbiE/COQ5 family [Rhodobacterales bacterium Y4I]
          Length = 211

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           +D  R+L+LG GTG+  +AL    P   + +  D+S + L + +  A  N  +   D   
Sbjct: 38  QDSDRVLELGCGTGSTAIALA---PTAGEIIATDLSEEMLRVGRERAW-NAAASNVDFRC 93

Query: 155 SDWFSSVEGLFDVIVS 170
            D  S+ +G FD +++
Sbjct: 94  CDVLSAPDGPFDAVMA 109


>gi|21328671|gb|AAM48677.1| magnesium-protoporphyrin O-methyltransferase [uncultured marine
           proteobacterium]
          Length = 221

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
             R+LD G GTGA+   L +       V VDIS K + IAK       VS     +  D 
Sbjct: 59  GARVLDAGCGTGALAFQLAQA--GADVVAVDISPKLITIAKQ-RQPAHVSGTLKLMAGDM 115

Query: 158 FSSVEGLFDVIVS 170
           F    G FD IV+
Sbjct: 116 FDPGLGHFDHIVA 128


>gi|50313460|gb|AAT74600.1| cyclopropane fatty acid synthase [Gossypium hirsutum]
          Length = 873

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 21/180 (11%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           +    +  SS  F    E   +     ++  + +        +LD+G G G++ +  +K 
Sbjct: 594 YLGKMMQYSSGVFRTGEEHLDVAQRRKISSLIEKTRIEKWHEVLDIGCGWGSLAIETVKR 653

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIES 177
           +   K  G+ +S + L+ A+      G+ +    L  D+     E  FD I+S    +E 
Sbjct: 654 T-GCKYTGITLSEQQLKYAQEKVKEAGLEDNIKILLCDYRQLPKEHQFDRIISV-EMVEH 711

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI---------ADGVSRHLN----KDGLCS 224
           V  + +    R  D  +      DGL   + I             +  L       G   
Sbjct: 712 VGEEYIEEFYRCCDQLL----KEDGLFVLQFISIPEELSKEIQQTAGFLKEYIFPGGTLL 767


>gi|23016659|ref|ZP_00056413.1| COG2230: Cyclopropane fatty acid synthase and related
           methyltransferases [Magnetospirillum magnetotacticum
           MS-1]
          Length = 405

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 36/149 (24%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +R+L++G G G     +  E      VG+ +S +    A       G++ER D    
Sbjct: 188 KPGMRVLEIGCGWGGFAELMAGEY-GATVVGLTLSEEQHAWATRRLAEAGLAERTDIRLQ 246

Query: 156 DWFSSVEGLFDVIVSN-----------PPYIESVIVDCLGLEVRDFDPRISLDGGIDGL- 203
           D +  V G FD IVS            P Y  ++    +              GG  GL 
Sbjct: 247 D-YRDVTGQFDRIVSVEMIEAVGERWWPTYFATIRDRLVP-------------GGKAGLQ 292

Query: 204 ---------SHYRTIADGVSRHLNKDGLC 223
                      YR   D + RH+   G+ 
Sbjct: 293 AITIADERFDTYRRGCDFIQRHVFPGGML 321


>gi|283779451|ref|YP_003370206.1| hypothetical protein Psta_1671 [Pirellula staleyi DSM 6068]
 gi|283437904|gb|ADB16346.1| protein of unknown function Met10 [Pirellula staleyi DSM 6068]
          Length = 428

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 8/79 (10%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LDL   TG   +   K     + +GVD+  + L++AK NA  N V  RF  +Q+D F+ 
Sbjct: 242 VLDLCCYTGGFAVQAKKLGGASEVIGVDLDEEPLKLAKENANLNQVRCRF--VQADAFAY 299

Query: 161 VEG------LFDVIVSNPP 173
           +         FDV+V +PP
Sbjct: 300 MRDMQSSGRKFDVVVLDPP 318


>gi|270158493|ref|ZP_06187150.1| cyclopropane-fatty-acyl-phospholipid synthase-like protein
           [Legionella longbeachae D-4968]
 gi|289166676|ref|YP_003456814.1| cyclopropane fatty acyl phospholipid synthase (Cyclopropane fatty
           acid synthase) (CFA synthase) [Legionella longbeachae
           NSW150]
 gi|269990518|gb|EEZ96772.1| cyclopropane-fatty-acyl-phospholipid synthase-like protein
           [Legionella longbeachae D-4968]
 gi|288859849|emb|CBJ13835.1| cyclopropane fatty acyl phospholipid synthase (Cyclopropane fatty
           acid synthase) (CFA synthase) [Legionella longbeachae
           NSW150]
          Length = 401

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L  S  +++    +R+LD+G G GA       E+     VG+ IS +    AK N V   
Sbjct: 146 LELSCQKLKLEPGMRVLDIGCGFGAFAKY-AAENYGVSVVGITISKEQCNYAKQNCVGLP 204

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  RF       +  +   FD ++S
Sbjct: 205 IEIRFQD-----YRDIHEKFDRVIS 224


>gi|257869266|ref|ZP_05648919.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257803430|gb|EEV32252.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 184

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 11/135 (8%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           D+   +L   S     RP T+ + +S      P +   D   +LDL  G+G + +     
Sbjct: 7   DYRGRKLKSLSGD-NTRPTTDKVKESIFNMIGPYL---DGGLVLDLFAGSGGLAIE-AVS 61

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNP 172
                 + VD S  A++I + N       E+F  L+ D   +++        FD I  +P
Sbjct: 62  RGAAHAICVDRSYPAIKIIRENIGITKEPEKFTVLKMDAKQALKEFVGTQQQFDYIFLDP 121

Query: 173 PYIESVIVDCLGLEV 187
           PY +  +V  L   V
Sbjct: 122 PYAKQELVLQLEQMV 136


>gi|257463772|ref|ZP_05628160.1| hypothetical protein FuD12_07985 [Fusobacterium sp. D12]
 gi|317061317|ref|ZP_07925802.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313686993|gb|EFS23828.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 481

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 36/201 (17%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF------FKG 124
            + P  E+  + + A  ++  + E +    + DL  G G +  A LK S         K 
Sbjct: 8   IYTPEMESRQMAELAFQYAPLQEEWQ----LADLSCGNGNLLTAFLKYSRERKKKTGVKY 63

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLG 184
            G DI  KA+  AK         E F   +       E  FD+I+ NPPY+       + 
Sbjct: 64  YGYDIDEKAIVEAKE---RLTEEESFFFCEDSLGLKTEERFDIILGNPPYLGEKNHKEIF 120

Query: 185 LEVRD-------FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC-SVEIGY----NQK 232
            +++        ++      G +D L       +     L ++G+   +   Y    +  
Sbjct: 121 EKLKKTDFGKKYYE------GKMDYLYF---FIEKAVDLLREEGILVYLTTDYWLVADGA 171

Query: 233 VDVVRIFESRKLFLVNAFKDY 253
             + +       FL   F+DY
Sbjct: 172 KTLRKTLREEGEFL--YFQDY 190


>gi|225719536|gb|ACO15614.1| Methyltransferase-like protein 5 [Caligus clemensi]
          Length = 210

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 11/122 (9%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
           +DF + ++ L      P P    +    L  +    E      + DLG+GTG + +    
Sbjct: 14  QDFQHPKILLEQ---YPTPPH--IASRLLYTAQQSYEDIQGSIVADLGSGTGMLSIG-AS 67

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-----GLFDVIVSNP 172
                   G +I   A+ IA  N    G+ E  D +Q D    +E     G+FD ++ NP
Sbjct: 68  LLGASLVNGFEIDPSAISIALDNVKEIGLQEPLDFIQMDALRLLESTPRRGIFDTVLMNP 127

Query: 173 PY 174
           P+
Sbjct: 128 PF 129


>gi|226325134|ref|ZP_03800652.1| hypothetical protein COPCOM_02926 [Coprococcus comes ATCC 27758]
 gi|225206482|gb|EEG88836.1| hypothetical protein COPCOM_02926 [Coprococcus comes ATCC 27758]
          Length = 202

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 14/130 (10%)

Query: 102 LDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           LDL +G+GA+ + A+ +       V V+ +  A++    N     ++++   ++ D FS+
Sbjct: 64  LDLFSGSGAIGIEAISRGVKKA--VFVENNPNAIQCIMENLKKTQLADQAKVIREDVFSA 121

Query: 161 V-----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
           +        FD +  +PPY        L  EV  +  +  L    D L            
Sbjct: 122 LRRLDGREKFDYVFMDPPY-----NHMLEKEVLTYLAKSDLL-EKDALIIVEASLATDFS 175

Query: 216 HLNKDGLCSV 225
           +L + G   +
Sbjct: 176 YLEELGFLMI 185


>gi|172037906|ref|YP_001804407.1| methyltransferase type 11/UbiE/COQ5 methyltransferase [Cyanothece
           sp. ATCC 51142]
 gi|171699360|gb|ACB52341.1| methyltransferase type 11/UbiE/COQ5 methyltransferase [Cyanothece
           sp. ATCC 51142]
          Length = 264

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 28/163 (17%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  L   L +    +  +IL+LG GTG   + L K  P    +G+D+S   L IA   A 
Sbjct: 85  EQWLRQYLLKAITVNPKKILELGCGTGTNTINLKKTFPDAVVIGLDLSPYMLVIADKKAQ 144

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                ++    +     S E            I S     + + +   +   +       
Sbjct: 145 K---DQQEIIWKQGLAESTE------------IPSSSFQLIIISLLFHEVPNA------- 182

Query: 203 LSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFES 241
               + I     R L   G   +  G          + ++F  
Sbjct: 183 --VSQAILKESWRLLKPKGQLIILDGNQNRLRHMKWLTQLFRE 223


>gi|170757395|ref|YP_001782496.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           B1 str. Okra]
 gi|169122607|gb|ACA46443.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           B1 str. Okra]
          Length = 458

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 272 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 327

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+    + +  D       V+   D+I
Sbjct: 328 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDII 383

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 384 ILDPP---RPGVHPVALEYVVKFEPK 406


>gi|164687720|ref|ZP_02211748.1| hypothetical protein CLOBAR_01362 [Clostridium bartlettii DSM
           16795]
 gi|164603494|gb|EDQ96959.1| hypothetical protein CLOBAR_01362 [Clostridium bartlettii DSM
           16795]
          Length = 453

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + +   +R  +S  +F    +T  L  +   + +   +       + DL +GTG +   L
Sbjct: 269 YEELLGLRFKISPFSFF---QTNTLGAEKLYSMAREFVGDYKDKVLYDLYSGTGTIGQVL 325

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
            +++   K  G++I  +A+E A  NA  NG++   + +  D     +S++   D+I+ +P
Sbjct: 326 SQKAR--KVYGIEIVEEAVEAANENAKLNGLTHC-EFIAGDVAKTVNSLKERPDIIIVDP 382

Query: 173 P 173
           P
Sbjct: 383 P 383


>gi|153939426|ref|YP_001392140.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           F str. Langeland]
 gi|152935322|gb|ABS40820.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           F str. Langeland]
 gi|295320145|gb|ADG00523.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           F str. 230613]
          Length = 453

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+    + +  D       V+   D+I
Sbjct: 323 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDII 378

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 379 ILDPP---RPGVHPVALEYVVKFEPK 401


>gi|153931008|ref|YP_001385124.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A str. ATCC 19397]
 gi|153937829|ref|YP_001388593.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A str. Hall]
 gi|152927052|gb|ABS32552.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A str. ATCC 19397]
 gi|152933743|gb|ABS39242.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A str. Hall]
          Length = 450

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+    + +  D       V+   D+I
Sbjct: 323 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDII 378

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 379 ILDPP---RPGVHPVALEYVVKFEPK 401


>gi|148380817|ref|YP_001255358.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           A str. ATCC 3502]
 gi|148290301|emb|CAL84425.1| putative RNA methyltransferase [Clostridium botulinum A str. ATCC
           3502]
          Length = 456

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 16/146 (10%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 272 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 327

Query: 113 LALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             +    P  K  +GV++  +A++ A  NA  NG+    + +  D       V+   D+I
Sbjct: 328 QIVA---PKAKKVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDII 383

Query: 169 VSNPPYIESVIVDCLGLE-VRDFDPR 193
           + +PP      V  + LE V  F+P+
Sbjct: 384 ILDPP---RPGVHPVALEYVVKFEPK 406


>gi|126657694|ref|ZP_01728848.1| ribosomal protein L11 methyltransferase [Cyanothece sp. CCY0110]
 gi|126620911|gb|EAZ91626.1| ribosomal protein L11 methyltransferase [Cyanothece sp. CCY0110]
          Length = 299

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 30/156 (19%)

Query: 57  WRDFY-----NVRLTLSSDTFEPRPETELLV-----------------DSALAFSLPRIE 94
           W++ +       R  +      P  ET+ L+                    L     R+ 
Sbjct: 92  WKEHWEPTEVGDRFIVYPAWLTPPEETDKLILRLDPGVAFGTGTHPTTQLCLESLEMRLS 151

Query: 95  K-RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           K ++   I D+G+G+G + +         K   VDI   A++ A+ N   N +      +
Sbjct: 152 KPKENTVIADIGSGSGILSIG-AILLGASKAYAVDIDPLAVKAARENRHLNQIHPDHLVI 210

Query: 154 Q----SDWFSSVEGLFDVIVSNPPYIESVIVDCLGL 185
                S+    V    D IV N   +  VI+D +  
Sbjct: 211 NQGSLSELLELVNDGVDGIVCN--ILAEVIIDLIPH 244


>gi|17548395|ref|NP_521735.1| methyltransferase protein [Ralstonia solanacearum GMI1000]
 gi|17430641|emb|CAD17325.1| putative sam-dependent methyltransferases protein [Ralstonia
           solanacearum GMI1000]
          Length = 274

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 30/137 (21%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +E      +LD+ +G+G   L L + S   +  GVD+   AL+  +  A    + +R 
Sbjct: 55  QWLELSPQSHLLDVCSGSGGPALFLARNS-GCRVTGVDLHPDALQTGRQLAQALELHDRS 113

Query: 151 DTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
             ++ D    +   +G FD +                  V     R++L           
Sbjct: 114 QFVECDVRQRMPFPDGTFDALWC-------------IDSVIHIPDRLAL----------- 149

Query: 208 TIADGVSRHLNKDGLCS 224
                  R L   G   
Sbjct: 150 --LREWCRLLKPGGRFL 164


>gi|323137210|ref|ZP_08072289.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
 gi|322397568|gb|EFY00091.1| Methyltransferase type 11 [Methylocystis sp. ATCC 49242]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 49/150 (32%), Gaps = 22/150 (14%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P    L             +   +   ++G GTG   LALL      K + VD + + LE
Sbjct: 26  PNHAYLAKRVGETVGAWRPEAGALTGFEIGCGTGVCTLALLAGRDDLKLIAVDSAARMLE 85

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
            A+ N      + R +  ++D  S+++            +    VD +            
Sbjct: 86  QARENLAGYVAAGRVEFKEADALSALQA-----------LPDASVDVVASNYAIH----- 129

Query: 196 LDGGIDGLSHYR-TIADGVSRHLNKDGLCS 224
                + L  YR  +   + R L   GL  
Sbjct: 130 -----NFLDDYRDDVLAEIFRVLKSGGLFI 154


>gi|303388914|ref|XP_003072690.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
           50506]
 gi|303301832|gb|ADM11330.1| dimethyladenosine transferase [Encephalitozoon intestinalis ATCC
           50506]
          Length = 277

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK-ALEIAKSNAVT 143
            +   + R + +    +L++G GTG + + LL+++   K +  +I  + A E+AK    T
Sbjct: 20  VIDTIIERAKIKPTDTVLEIGGGTGNLTMKLLQKAK--KVICYEIDPRLAAELAKKVNGT 77

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
            G++++F     D        FD+ +SN PY
Sbjct: 78  PGMAQKFQLFVGDALKHDFPHFDLCISNLPY 108


>gi|238898007|ref|YP_002923687.1| methylation of 50S ribosomal subunit protein L11 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|259534540|sp|C4K4P6|PRMA_HAMD5 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|229465765|gb|ACQ67539.1| methylation of 50S ribosomal subunit protein L11 [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 305

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           +D G G+G + +A LK     + +G+DI  +A+E ++ NA  NGVSE    L        
Sbjct: 170 IDFGCGSGILAIAALKLGAK-QAIGIDIDPQAIEASRDNAQRNGVSEHL-VLYLSGQEPK 227

Query: 162 EGLFDVIVSN 171
               DV+V+N
Sbjct: 228 NLQADVVVAN 237


>gi|229071622|ref|ZP_04204840.1| Biotin biosynthesis protein BioC [Bacillus cereus F65185]
 gi|228711558|gb|EEL63515.1| Biotin biosynthesis protein BioC [Bacillus cereus F65185]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIEQLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|229081374|ref|ZP_04213877.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-2]
 gi|228701996|gb|EEL54479.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-2]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIEQLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|229180397|ref|ZP_04307740.1| Biotin biosynthesis protein BioC [Bacillus cereus 172560W]
 gi|228603144|gb|EEK60622.1| Biotin biosynthesis protein BioC [Bacillus cereus 172560W]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIEQLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|254392306|ref|ZP_05007490.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326441417|ref|ZP_08216151.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           clavuligerus ATCC 27064]
 gi|197705977|gb|EDY51789.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 438

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 25/139 (17%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +  +R+LD+G G G++ L   +E    +  GV +S +  + A+      G
Sbjct: 194 LDLVCRKLDLQQGMRLLDVGCGWGSMALHAAREY-GVRVTGVTLSREQADHARKRVADAG 252

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSH 205
           +++R +    D+    +G +D + S            +   V              G + 
Sbjct: 253 LADRVEIRVQDYRDVRDGPYDAVSS----------IGMAEHV--------------GAAP 288

Query: 206 YRTIADGVSRHLNKDGLCS 224
           Y   A  +   L   G   
Sbjct: 289 YLEYARQLRALLRPGGRLL 307


>gi|206971291|ref|ZP_03232242.1| putative biotin synthesis protein BioC [Bacillus cereus AH1134]
 gi|206734063|gb|EDZ51234.1| putative biotin synthesis protein BioC [Bacillus cereus AH1134]
          Length = 269

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 33  LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 91

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 92  -----NVTFHCEDIEQLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 139


>gi|156549461|ref|XP_001603783.1| PREDICTED: similar to ENSANGP00000011586 [Nasonia vitripennis]
          Length = 615

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 10/108 (9%)

Query: 51  IHRILGWRD----FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLG 105
           I  I G          +   +S + F    +   L   AL  +   + K      +LD+ 
Sbjct: 400 IEHISGTHYIEETLLGMTFRISPEAFF---QINTLGAEALYNTAIELAKPLTDTALLDVC 456

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
            GTG + L+  K     + +G++++  A+E AK NA  N V      +
Sbjct: 457 CGTGTIGLSFAKHCD--EVLGIEMTPSAIENAKVNAKENDVKNCEFFV 502


>gi|89054481|ref|YP_509932.1| cyclopropane-fatty-acyl-phospholipid synthase [Jannaschia sp. CCS1]
 gi|88864030|gb|ABD54907.1| cyclopropane-fatty-acyl-phospholipid synthase [Jannaschia sp. CCS1]
          Length = 403

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 43  VRSLKHESIHRILGWRDFYNVRL----TLSSDTFEPRPETELLVDSA-LAFSLPRIEKRD 97
            ++ K+ S H  LG  +FY + L    T SS  FE   E+  +  +A  A  + ++    
Sbjct: 128 AQAKKNISAHYDLGN-EFYGLWLDDTMTYSSALFETGQESLEVAQTAKYASMVDQMGAVA 186

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +L++G G G       KE    K  G+ IS +  + A       G+++  D    D+
Sbjct: 187 GDHVLEIGCGWGGFAEYAAKER-GIKVTGLTISQEQHDYAVKRIADAGLTDMVDIKLQDY 245

Query: 158 FSSVEGLFDVIVS 170
               +G +D I S
Sbjct: 246 RDE-QGTYDGIAS 257


>gi|331085068|ref|ZP_08334155.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330408768|gb|EGG88233.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 189

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            + RP T+ + ++      P +      R LDL  G+G + +         + V V+ + 
Sbjct: 19  LDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIE-ALSRGAGEAVFVEQNP 74

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLE 186
           KA+   K N     + ER  T+ +D  +++      G FD I  +PPY        L  +
Sbjct: 75  KAMACIKENLKKTKLEERAVTMATDVMTALRRMEGSGTFDYIFMDPPY-----NKLLEKQ 129

Query: 187 VRDF 190
           V ++
Sbjct: 130 VLEY 133


>gi|315640769|ref|ZP_07895871.1| methyltransferase [Enterococcus italicus DSM 15952]
 gi|315483524|gb|EFU74018.1| methyltransferase [Enterococcus italicus DSM 15952]
          Length = 187

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 11/132 (8%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +   +L     T   RP T+ +  +      P     D  ++LDL +G+G + +  +   
Sbjct: 8   YGGRKLKSLPGT-NTRPTTDKVKGAIYNMLGPYF---DGGKVLDLFSGSGGLAIEAISRG 63

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV------EGLFDVIVSNPP 173
              K V VD + +A+ I K N       E+F  L+ D  +++      E  FD+I+ +PP
Sbjct: 64  MD-KAVCVDKNYQAISIIKENIQITKEPEKFVVLKMDANAALKKLSGEEMKFDLILFDPP 122

Query: 174 YIESVIVDCLGL 185
           Y +  IVD +  
Sbjct: 123 YAKQEIVDQIEQ 134


>gi|306812692|ref|ZP_07446885.1| 23S rRNA methyluridine methyltransferase [Escherichia coli NC101]
 gi|305853455|gb|EFM53894.1| 23S rRNA methyluridine methyltransferase [Escherichia coli NC101]
          Length = 375

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|251790344|ref|YP_003005065.1| type 11 methyltransferase [Dickeya zeae Ech1591]
 gi|247538965|gb|ACT07586.1| Methyltransferase type 11 [Dickeya zeae Ech1591]
          Length = 265

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L    K+ ++ ILD+GTG G   + L       +   VD++   L  A+SNA    V
Sbjct: 52  EIILRHAPKKPLLNILDVGTGPGFFAVTLAMA--GHRVTAVDVTPAMLAQARSNADYYDV 109

Query: 147 SERFDTLQSDWFSSVEGLFDVIVS 170
              F           +  FDV+V+
Sbjct: 110 EIAFVATDVHALPFPDNHFDVLVT 133


>gi|271966820|ref|YP_003341016.1| type 11 methyltransferase [Streptosporangium roseum DSM 43021]
 gi|270509995|gb|ACZ88273.1| methyltransferase type 11 [Streptosporangium roseum DSM 43021]
          Length = 355

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 67/218 (30%), Gaps = 39/218 (17%)

Query: 19  SHQVIVDPDSVLDDRQRFFLTNAIVRSLKH---ESIHRILGWRDFYNVRLT-LSSDTFEP 74
              +      VL D         + R +     ++   +  +RD   V      +D  E 
Sbjct: 86  RFTLPAGAAEVLTDESSLAYLAPLARMIAGAATQTPALLEAYRDGGGVGWAAFGTDVRES 145

Query: 75  RPETEL-LVDSALAFSLPRIE------KRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
           + E      + AL  +L  +       +R   R+ D+G G G   +AL +  P     G+
Sbjct: 146 QAEMNRPWFERALPDALAGVPDLDALLRRPGARVADVGCGGGWSTIALARAYPQAVVEGI 205

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEV 187
           DI   ++E+A  NA   G          D  +     +D + +         +  +   V
Sbjct: 206 DIDGPSVELAVRNAARAGAD--VAFRHGDAHALAGNAYDAVFA------FECIHDMPQPV 257

Query: 188 RDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                        D L+  R         L   G   V
Sbjct: 258 -------------DTLTRIRR-------ALRPGGTVVV 275


>gi|224438173|ref|ZP_03659108.1| hypothetical protein HcinC1_09345 [Helicobacter cinaedi CCUG 18818]
 gi|313144618|ref|ZP_07806811.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129649|gb|EFR47266.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 262

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 58/178 (32%), Gaps = 34/178 (19%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE---- 118
           + +    D +    ++ +L   A AF   RI       +LD+G G+G + +   +E    
Sbjct: 4   LEIYQLHDGYCYNTDSLILSHFARAFLKSRIS------LLDVGAGSGILGMLCAREILNK 57

Query: 119 -----SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVIVSNP 172
                +P      V+      + A  N               D+     +  FD ++SNP
Sbjct: 58  ATPHKNPHINLHLVEKDTLMAQCASLNTRQFESKIHSQVHCVDFLDFHTDIKFDFVISNP 117

Query: 173 PYIESVIVD--CLGLEVRDFD---PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P+     +    +   +       P  +L      L+H + +          +G   +
Sbjct: 118 PFYAKGALQGTNMRKNMARHQSFLPLPAL------LAHIKRVI-------KPNGSLCL 162


>gi|212224662|ref|YP_002307898.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
 gi|212009619|gb|ACJ17001.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus onnurineus
           NA1]
          Length = 419

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +  ++LDL +G G   + L K    F   G++I+  A+E+A  NA  NG+   F   +  
Sbjct: 276 EGEKVLDLYSGVGTFGVYLAKR--GFTVEGIEINPFAVEMANRNAELNGIDAVFSVGEDK 333

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
              ++   +D I+ +PP   + +   L  ++   +P+ 
Sbjct: 334 DVKNL-AKYDTIILDPP--RAGLHPKLVKKILKDEPQT 368


>gi|189913284|ref|YP_001964513.1| Cyclopropane-fatty-acyl-phospholipid synthase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|167781352|gb|ABZ99649.1| Cyclopropane-fatty-acyl-phospholipid synthase [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 386

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 30/178 (16%)

Query: 52  HRILGWRD---FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG R    F +  +T SS  FE   +T     +  +     +++      +L++G+G
Sbjct: 115 HYDLGNRFYKLFLDPTMTYSSAYFESLDQTLEEAQTTKVDRLCQKLKLNPKDHLLEIGSG 174

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + +   K     K   V +S +    AK      G+S++ +    D +  +EG F  
Sbjct: 175 WGFLSIHAAKNY-GCKVTTVTLSEEQFRFAKERIEKEGLSDKIEIRIQD-YRKIEGRFTK 232

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +VS         V+ L                  G + Y T        L +DG+ ++
Sbjct: 233 LVS---------VEMLEAV---------------GDAFYETFFQKCQDLLTQDGIMAL 266


>gi|189912958|ref|YP_001964847.1| Cyclopropane fatty acid synthase-related methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167777634|gb|ABZ95934.1| Cyclopropane fatty acid synthase-related methyltransferase
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
          Length = 396

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 30/178 (16%)

Query: 52  HRILGWRD---FYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG R    F +  +T SS  FE   +T     +  +     +++      +L++G+G
Sbjct: 125 HYDLGNRFYKLFLDPTMTYSSAYFESLDQTLEEAQTTKVDRLCQKLKLNPKDHLLEIGSG 184

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + +   K     K   V +S +    AK      G+S++ +    D +  +EG F  
Sbjct: 185 WGFLSIHAAKNY-GCKVTTVTLSEEQFRFAKERIEKEGLSDKIEIRIQD-YRKIEGRFTK 242

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +VS         V+ L                  G + Y T        L +DG+ ++
Sbjct: 243 LVS---------VEMLEAV---------------GDAFYETFFQKCQDLLTQDGIMAL 276


>gi|156408083|ref|XP_001641686.1| predicted protein [Nematostella vectensis]
 gi|156228826|gb|EDO49623.1| predicted protein [Nematostella vectensis]
          Length = 349

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 27/146 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           D+ L     R +  D   ++DLG G G++ L + ++ P  K   V  S       +  A 
Sbjct: 101 DAVLDQVCKRAQVEDGQDVMDLGCGWGSLALWVCEKYPNCKVTCVSNSQTQRAFIEKQAQ 160

Query: 143 TNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
             G + R   + +D    S    FD I+SN           +   +++++          
Sbjct: 161 LRGFTNRLQCITADANVFSTSLRFDRIISN----------EMFEHMKNYE---------- 200

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEI 227
                  +   VS  L   GL  ++I
Sbjct: 201 ------ILMSRVSSWLKPHGLLFIQI 220


>gi|33151297|ref|NP_872650.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi
           35000HP]
 gi|38605187|sp|Q7VPN5|PRMA_HAEDU RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|33147517|gb|AAP95039.1| ribosomal protein L11 methyltransferase [Haemophilus ducreyi
           35000HP]
          Length = 293

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 4/75 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD-TLQSD 156
              ++D G G+G + ++ LK     + +G+DI  +A+  +++NA  NGV++R    L  D
Sbjct: 159 GKTVIDFGCGSGILAISALKLGAK-QAIGIDIDPQAILASQNNAAANGVADRLQLFLAKD 217

Query: 157 WFSSVEGLFDVIVSN 171
              ++    DV+V+N
Sbjct: 218 QPQAL--QADVVVAN 230


>gi|325129518|gb|EGC52345.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           OX99.30304]
          Length = 295

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|292493772|ref|YP_003529211.1| methyltransferase type 11 [Nitrosococcus halophilus Nc4]
 gi|291582367|gb|ADE16824.1| Methyltransferase type 11 [Nitrosococcus halophilus Nc4]
          Length = 247

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 51/154 (33%), Gaps = 32/154 (20%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            +++L++G GTG   LALL          VD     L  A+ N        +   +++D 
Sbjct: 50  PLKVLEIGCGTGITTLALLNSREDIHLTSVDNEPTMLNQARQNLSRWIEKGQVILVENDA 109

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR-TIADGVSRH 216
            S++  L D              D L +    +     L+        YR      + R 
Sbjct: 110 LSALCDLPD--------------DSLDMVASAYTLHNFLNS-------YREKALAEILRA 148

Query: 217 LNKDGLCS---------VEIGYNQ-KVDVVRIFE 240
           L   G+            E    Q + +V R FE
Sbjct: 149 LKPGGIFVNGDRYGLDDFEAHTQQVQTEVKRYFE 182


>gi|284031796|ref|YP_003381727.1| type 11 methyltransferase [Kribbella flavida DSM 17836]
 gi|283811089|gb|ADB32928.1| Methyltransferase type 11 [Kribbella flavida DSM 17836]
          Length = 222

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 30/129 (23%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
               LD G GTGA  + L +    ++   VDIS +AL  A+  +   G+S++   +++D 
Sbjct: 41  PGSALDAGCGTGAEAIWLAEH--GWQVTAVDISAEALARAEERSAPRGMSQQVRWVEADL 98

Query: 158 F-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                E  +D++ ++  Y    I                       L  Y  IA    R 
Sbjct: 99  SVWQPETQYDLVTTH--YAHPAIPQ---------------------LKFYDRIA----RW 131

Query: 217 LNKDGLCSV 225
           +   G   +
Sbjct: 132 VAPGGTLLI 140


>gi|261402840|ref|YP_003247064.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
 gi|261369833|gb|ACX72582.1| protein of unknown function Met10 [Methanocaldococcus vulcanius M7]
          Length = 385

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQ 154
           ++  R+LD+   TG   +         + VGVD+S KAL+ A+ N   N +  ++++ ++
Sbjct: 211 KEGDRVLDVCCYTGGFSVHAAIR--GAEVVGVDLSKKALKTAEENMELNNIPKDKYEFIE 268

Query: 155 SDWFSSVE------GLFDVIVSNPPYIESVIVDC 182
            + F  +E        FDV++ +PP         
Sbjct: 269 GNAFKIMEEFIEDGERFDVVILDPPAFAQSKKSL 302


>gi|86356538|ref|YP_468430.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CFN 42]
 gi|86280640|gb|ABC89703.1| cyclopropane-fatty-acyl-phospholipid synthase protein [Rhizobium
           etli CFN 42]
          Length = 419

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 42/83 (50%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
               ++  +   RIL++G+G G + + L + +      G+ +S + L++++S A   G+S
Sbjct: 164 HIAAKLLLKPNQRILEIGSGWGGMGMYLAEATEGADFTGITLSEEQLKVSRSRAEKRGLS 223

Query: 148 ERFDTLQSDWFSSVEGLFDVIVS 170
           ER      D+ +     FD IVS
Sbjct: 224 ERVRFELQDYRTMNGRKFDRIVS 246


>gi|54294351|ref|YP_126766.1| hypothetical protein lpl1419 [Legionella pneumophila str. Lens]
 gi|53754183|emb|CAH15659.1| hypothetical protein lpl1419 [Legionella pneumophila str. Lens]
          Length = 219

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGV 127
            D +    ++  L     A  L        +R+LDL  G G + + L        +   +
Sbjct: 20  PDDYHFSLDSIHLAKFV-AKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFI 78

Query: 128 DISCKALEIAKSNAV---TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESV 178
           +I     E    N        +  R+  L  D       E  FD+I+SNPPY +  
Sbjct: 79  EIQDIYTECFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPG 134


>gi|332362620|gb|EGJ40418.1| O-methyltransferase [Streptococcus sanguinis SK49]
          Length = 227

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 57/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKVNFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   +++  +D++     +++S     +                          
Sbjct: 124 LEGDAMDLLETLDDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              + + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQILKRLNPGGLILI---DDVFQGGDVAKSFED 185


>gi|319940477|ref|ZP_08014822.1| hypothetical protein HMPREF9464_00041 [Sutterella wadsworthensis
           3_1_45B]
 gi|319806103|gb|EFW02852.1| hypothetical protein HMPREF9464_00041 [Sutterella wadsworthensis
           3_1_45B]
          Length = 277

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 42/147 (28%), Gaps = 28/147 (19%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
                +LD+G G     LA+      +K  G D S + L  A  NA T G    F    +
Sbjct: 62  PSGGSVLDVGCG--PALLAITAARCGWKAYGCDSSPEMLRRALENAKTAGADVTFCQCDA 119

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSR 215
                 +  FD ++S                V    P                      R
Sbjct: 120 AALPFADETFDAVIS--------------RNVLWNLPH------------PERALKEWMR 153

Query: 216 HLNKDGLCSVEIGYNQKVDVVRIFESR 242
            L   G    E G + +  V  +F+  
Sbjct: 154 VLKPGGRLLYEDGNHYRHLVDPLFKRH 180


>gi|300711062|ref|YP_003736876.1| hypothetical protein HacjB3_08505 [Halalkalicoccus jeotgali B3]
 gi|299124745|gb|ADJ15084.1| hypothetical protein HacjB3_08505 [Halalkalicoccus jeotgali B3]
          Length = 329

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 13/121 (10%)

Query: 65  LTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
           L L++  F PR         A        +  +   + D+  G G   +         + 
Sbjct: 150 LDLAAVYFSPR--------LATERHRVTEQVAENEHVFDMFAGVGPFAIPAAAR--GAQA 199

Query: 125 VGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVD 181
           VG D++ +A+E  + NA  NGV +R      D        EG  D I+ N P+     ++
Sbjct: 200 VGADVNGRAIEYLRENAERNGVGDRVTAFHGDVREVAPEYEGWADRILMNLPHSAEGFLE 259

Query: 182 C 182
            
Sbjct: 260 T 260


>gi|296504611|ref|YP_003666311.1| biotin synthesis protein BioC [Bacillus thuringiensis BMB171]
 gi|296325663|gb|ADH08591.1| biotin synthesis protein BioC [Bacillus thuringiensis BMB171]
          Length = 269

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 33  LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 91

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 92  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 139


>gi|228902627|ref|ZP_04066778.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 4222]
 gi|228941269|ref|ZP_04103822.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228967154|ref|ZP_04128190.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228974201|ref|ZP_04134771.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980792|ref|ZP_04141097.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis Bt407]
 gi|228778961|gb|EEM27223.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis Bt407]
 gi|228785541|gb|EEM33550.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792523|gb|EEM40089.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228818428|gb|EEM64500.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228857068|gb|EEN01577.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis IBL 4222]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|229111591|ref|ZP_04241142.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-15]
 gi|228671973|gb|EEL27266.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock1-15]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|229146692|ref|ZP_04275059.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST24]
 gi|228636862|gb|EEK93325.1| Biotin biosynthesis protein BioC [Bacillus cereus BDRD-ST24]
          Length = 242

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 6   LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 64

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 65  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 112


>gi|269839204|ref|YP_003323896.1| methyltransferase type 11 [Thermobaculum terrenum ATCC BAA-798]
 gi|269790934|gb|ACZ43074.1| Methyltransferase type 11 [Thermobaculum terrenum ATCC BAA-798]
          Length = 252

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 33/147 (22%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V +  A  +  +      R+LDLG GTG +   + +     + VG+DIS + + +A+   
Sbjct: 16  VSAMGADLIELLAPAPGERVLDLGCGTGDLAHRIAQR--GAEVVGIDISPEMVAMAR--- 70

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
            +     RF+      + S +G FD + SN                       +L     
Sbjct: 71  -SKYPHIRFEVADVQDYRS-DGSFDAVFSNA----------------------AL----H 102

Query: 202 GLSHYRTIADGVSRHLNKDGLCSVEIG 228
            +   R + + V   L   G    E G
Sbjct: 103 WMRKPRQVLESVRSALRPGGRFVAEFG 129


>gi|117620857|ref|YP_855648.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562264|gb|ABK39212.1| cyclopropane-fatty-acyl-phospholipid synthase [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 418

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 35/204 (17%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  +     +      A L     R+E      +L++GTG
Sbjct: 138 HYDLGNTLYQGFLDSHMQYSSAIYPHSEASLEEGQQAKLRTICERLELGPDDHLLEIGTG 197

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            G + +   +     +     IS    + AK      G+ +R   L  D +  +EG +D 
Sbjct: 198 WGGLAVYAARHY-GCRVTTTTISRAQHDYAKEWIAREGLGDRITLLLED-YRKLEGTYDK 255

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           +VS         ++ +      F P                    +SR L   G   +  
Sbjct: 256 LVS---------IEMIEAVGHAFLPDY---------------FRQLSRLLKPGGRLLI-- 289

Query: 228 GYNQKVDVVRIFESRKLFLVNAFK 251
              Q + +     ++ L  V+  +
Sbjct: 290 ---QAITIADQRHAQYLRGVDFIQ 310


>gi|94269874|ref|ZP_01291588.1| Methyltransferase small:Ribosomal L11 methyltransferase [delta
           proteobacterium MLMS-1]
 gi|93451037|gb|EAT01998.1| Methyltransferase small:Ribosomal L11 methyltransferase [delta
           proteobacterium MLMS-1]
          Length = 360

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 27/173 (15%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++    +LD+G GTG + +A        + V  D   +A+ +A+ N   N ++       
Sbjct: 160 QKPPATVLDVGCGTGILAMAAAL-WGCPRVVATDNDPQAVAVARDNFAANQLTIEATVTP 218

Query: 155 SDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI-SLDGGIDGL---------- 203
               +++   F  +  +     S  +   G       P+  +L  G   L          
Sbjct: 219 P---AALGEQFVNVQQHRTLRRSAKLTYRGYAALGCLPQSAALLNGYGPLNQRSAALGEQ 275

Query: 204 ----------SHYRTIADGVSRHLNKDGLCSV--EIGYNQKVDVVRIFESRKL 244
                          +A  ++  L   G   +   +   Q++ +   F+   L
Sbjct: 276 FEVVLANIIHDVLLEMATELAAALKPGGHLILAGILSGEQEISIKDHFQELGL 328


>gi|332143327|ref|YP_004429065.1| ribosomal protein L11 methyltransferase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|226706549|sp|B4S130|PRMA_ALTMD RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|327553349|gb|AEB00068.1| ribosomal protein L11 methyltransferase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 292

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 43/191 (22%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPD-----SVLDDR--QRFFLTNAIVRSLKHESIHRI 54
           +A  D  S L R  G +    ++ PD       L+D+  +R ++ N          +   
Sbjct: 61  EADADMKSILQR-LGKAK---VLGPDFKYKLEPLEDKDWEREWMDNF-------HPMQ-- 107

Query: 55  LGWRDFYNVRLTLSSDTF-EPRPE-TELLVDSALAF----------SLPRIEKRD--VVR 100
                 +  RL +       P P+   +++D  LAF           L  ++  D     
Sbjct: 108 ------FGERLWICPSWRDVPDPDAVNVMLDPGLAFGTGTHPTTALCLRWLDGIDMAGKT 161

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D G G+G +      +    + VGVDI  +AL+  K NA  NGV +R D         
Sbjct: 162 VVDFGCGSG-ILALAALKLGAERVVGVDIDPQALQATKENARRNGVEDRLDVYLPQDQPE 220

Query: 161 VEGLFDVIVSN 171
           +E   DV+++N
Sbjct: 221 LEA--DVVMAN 229


>gi|75759243|ref|ZP_00739343.1| Biotin synthesis protein bioC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218899278|ref|YP_002447689.1| putative biotin synthesis protein BioC [Bacillus cereus G9842]
 gi|74493249|gb|EAO56365.1| Biotin synthesis protein bioC [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218543015|gb|ACK95409.1| putative biotin synthesis protein BioC [Bacillus cereus G9842]
 gi|326941890|gb|AEA17786.1| biotin synthesis protein BioC [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 269

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R  +   +RIL+LG GTG V   L K  P      VD +   + IA  + N   
Sbjct: 33  LSILKERYSETASIRILELGCGTGYVTEQLSKLFPKAHITAVDFAESMIAIAQTRQNVK- 91

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
                       D     +E  +DVI+SN  +     ++ L   +R+    +S+DG
Sbjct: 92  -----NVTFHCEDIERLRLEESYDVIISNATF---QWLNNLQQVLRNLFQHLSIDG 139


>gi|302845698|ref|XP_002954387.1| hypothetical protein VOLCADRAFT_106378 [Volvox carteri f.
           nagariensis]
 gi|300260317|gb|EFJ44537.1| hypothetical protein VOLCADRAFT_106378 [Volvox carteri f.
           nagariensis]
          Length = 211

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 5/98 (5%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L    L       ++     ++DLG GT  + +           +G+DI  +ALE+A  N
Sbjct: 32  LASQLLFAVDSSYDELAGSTVVDLGCGTAMLSIGAAL-LGSRHVLGLDIDAEALEVAGEN 90

Query: 141 AVTNGVSERFDTLQSDWFSSVEG----LFDVIVSNPPY 174
           A         D L +D             DV++ NPP+
Sbjct: 91  AAQYEEPLPIDFLLADVRQLPRQLPRLRADVVIMNPPF 128


>gi|295092114|emb|CBK78221.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Clostridium cf. saccharolyticum K10]
          Length = 319

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 47/215 (21%)

Query: 6   DSHSFLCRVT-GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVR 64
           D+ S L +V  GL   ++ V+  +   +       +             I  W+ ++   
Sbjct: 72  DTESILGQVREGLEELKLFVNLGACTIEESETEDKDW------------INNWKQYFK-P 118

Query: 65  LTLSSDTFEPRPE-------TELLVD--------------SALAFSLPRIEKRDVVRILD 103
            T+     +P  E        +LL+               + L     +       R+LD
Sbjct: 119 FTVDDILIKPTWEEIPKEHEDKLLIQIDPGTAFGTGMHETTQLCIRQMKKYVTPETRLLD 178

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE 162
           +GTG+G + +    +    +  G D+   A+     N   NG+ E RF  +Q +     E
Sbjct: 179 VGTGSGILGIT-ALKLGAREVFGTDLDENAIVAVGENLEANGIGEGRFTVVQGNIIDDKE 237

Query: 163 GL-------FDVIVSNPPYIESVIVDCLGLEVRDF 190
                    +DV V+N   I + ++  L  E+   
Sbjct: 238 IQDKAGYECYDVAVAN---ILADVIILLQKEIPVH 269


>gi|148926138|ref|ZP_01809824.1| possible ribosomal protein methyltransferase [Campylobacter jejuni
           subsp. jejuni CG8486]
 gi|145845617|gb|EDK22709.1| possible ribosomal protein methyltransferase [Campylobacter jejuni
           subsp. jejuni CG8486]
          Length = 299

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +R LDLG G+G + + + K     +    D    A++ +  NA  NGV   F     
Sbjct: 163 KSKLRALDLGCGSGILGIIMAKLGCNVEICDTD--ELAIDSSLENARLNGVD--FHKAWC 218

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
                  GL+++IV+N   I + ++  L  ++++ 
Sbjct: 219 GSIDKANGLYNLIVAN---IIADVILILEKDIKNH 250


>gi|91794716|ref|YP_564367.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           denitrificans OS217]
 gi|91716718|gb|ABE56644.1| cyclopropane-fatty-acyl-phospholipid synthase [Shewanella
           denitrificans OS217]
          Length = 426

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 38/183 (20%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
            R+E  +   +L++GTG G + + + +E    K     IS      A+   +  G++++ 
Sbjct: 190 ERLELAEGEHVLEIGTGWGGLAIFMAQEY-GCKVTTTTISEAQFAFAQQQIIALGLTDKI 248

Query: 151 DTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL------- 203
             L+ D +  + G +D +VS              +E    +   +      GL       
Sbjct: 249 TLLKQD-YRKLSGEYDKLVS-----------IEMIEAVGHEYLGAFFETCSGLLKPSGKM 296

Query: 204 ------------SHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
                         YR   D + +++   G        +  V   ++ E   L  V+  +
Sbjct: 297 LIQAITIADSRYDKYRKGVDFIQKYIFPGGCL-----PSIAVMTAQLAERTDLV-VHEIQ 350

Query: 252 DYG 254
           D G
Sbjct: 351 DIG 353


>gi|299067764|emb|CBJ38974.1| Protein-L-isoaspartate O-methyltransferase [Ralstonia solanacearum
           CMR15]
          Length = 216

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 14/146 (9%)

Query: 41  AIVRSLKHESIHR-ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV 99
           AIV+  ++       L + D   + L    +   PR E  +L + A+         R   
Sbjct: 30  AIVKREQYVPEAYRTLAFVD-MEIPLPGGQNMLPPRVEARVLQELAV---------RKHE 79

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +L++G G+G +   L           VDI+ +    A+ N   NGV+   D +Q D   
Sbjct: 80  DVLEVGAGSGYMAALLAHR--GRHVTTVDIAPELAAFARDNLARNGVT-NVDVVQGDAGQ 136

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGL 185
                   ++     + +V    L  
Sbjct: 137 GWGNSLYDVICVSGSVPAVQESLLAQ 162


>gi|282882352|ref|ZP_06290980.1| methyltransferase type 11 [Peptoniphilus lacrimalis 315-B]
 gi|281297773|gb|EFA90241.1| methyltransferase type 11 [Peptoniphilus lacrimalis 315-B]
          Length = 275

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 38/183 (20%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI------SCKAL 134
           L    +  +   ++  D    LD+G G+GA+ +A  K++P    VG DI      S  + 
Sbjct: 90  LAKIIIERTADYVKIPDGGVGLDVGCGSGALSIACAKKNPKATMVGCDIWSGSYKSEFSK 149

Query: 135 EIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
           ++ + NA   G+ + +F+   +      +  FD + SN  Y+   I              
Sbjct: 150 KLCEDNAKLEGLANVKFEEGNAVNLPFEDQSFDAVTSN--YVYHNITGQNKQ-------- 199

Query: 194 ISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKLFLV 247
                          +     R L K G+  +         Y      +   +      V
Sbjct: 200 --------------KLLLETFRVLKKGGVFVI-HDLMNKSSYGDMNKFMEKLKKDGYQDV 244

Query: 248 NAF 250
              
Sbjct: 245 RLI 247


>gi|254852122|ref|ZP_05241470.1| O-methyltransferase [Listeria monocytogenes FSL R2-503]
 gi|300764837|ref|ZP_07074827.1| O-methyltransferase [Listeria monocytogenes FSL N1-017]
 gi|258605425|gb|EEW18033.1| O-methyltransferase [Listeria monocytogenes FSL R2-503]
 gi|300514513|gb|EFK41570.1| O-methyltransferase [Listeria monocytogenes FSL N1-017]
          Length = 217

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEHAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            ++R   L +D     E     G FD I
Sbjct: 100 ANDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|254471683|ref|ZP_05085084.1| methyltransferase type 11 [Pseudovibrio sp. JE062]
 gi|211958885|gb|EEA94084.1| methyltransferase type 11 [Pseudovibrio sp. JE062]
          Length = 246

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 56/160 (35%), Gaps = 33/160 (20%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              +  +       +L+LG GTG   +   +  P  +  GVDIS + L+ A++N     +
Sbjct: 34  DHLIKHLSAPRGSTVLELGCGTGRNLIEAARAYPTCQFFGVDISSQMLKTAEANIHKADL 93

Query: 147 SERFDTLQSDW--FSSVE----GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           S R    Q D   F   E      FD +        S  V  +           +L    
Sbjct: 94  SHRIHLAQGDATSFDPFEKFGIDTFDRV------FLSYCVSMIPPW------EEAL---- 137

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
                        ++ L K G  SV + + Q+  +  +F+
Sbjct: 138 ----------RNGTKLLAKGGQLSV-VDFGQQERLPGLFK 166


>gi|269218655|ref|ZP_06162509.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 848
           str. F0332]
 gi|269211766|gb|EEZ78106.1| RNA methyltransferase, RsmD family [Actinomyces sp. oral taxon 848
           str. F0332]
          Length = 185

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 60/167 (35%), Gaps = 31/167 (18%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
              + + +    P  E    V  AL   L  +   +   +LDL +G+GA+ L        
Sbjct: 11  GRTIKVPASGTRPTSER---VREALFSRLDHLGYVEGRAVLDLYSGSGALGLE-AASRGA 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVI 179
                V+ S KA E+ ++NA    +  +   ++ +       +  FDV+  +PPY     
Sbjct: 67  AFVECVESSRKAAELIRANARALNLRAKVSCMRVELRLADPSQTAFDVVFLDPPY----- 121

Query: 180 VDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
              L  E      R++             +   +   L  DG+  VE
Sbjct: 122 --NLDEE------RLA------------AVLARLPGVLAPDGVAVVE 148


>gi|134102544|ref|YP_001108205.1| methyltransferase (methylase) [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915167|emb|CAM05280.1| possible methyltransferase (methylase) [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 208

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +      P  E    V  AL  +L    +    R+LDL  G+GA+ L        
Sbjct: 26  GRRIEVPPRGTRPTSER---VREALFSALESATELAGARVLDLYGGSGALGLE-ALSRGA 81

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
                V+   +A+++ + NA   G  +     Q        S+    FDV++++PPY
Sbjct: 82  AHATFVESDRRAVQLLRRNASALGFRD-VSVAQGKVETVLASAAGEPFDVVLADPPY 137


>gi|124486498|ref|YP_001031114.1| hypothetical protein Mlab_1686 [Methanocorpusculum labreanum Z]
 gi|124364039|gb|ABN07847.1| Methyltransferase type 11 [Methanocorpusculum labreanum Z]
          Length = 287

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 64/177 (36%), Gaps = 39/177 (22%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A A  LP +  ++   ILD+G G G + + + +  P     G+D+   ++E +K NA   
Sbjct: 131 AFAEVLPLLSGKN---ILDVGCGLGTLAIKIAEAKPESLVYGIDLLESSVEQSKLNAEVE 187

Query: 145 GVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           GV+  RF    +      EG FD +V          +D +   +RD              
Sbjct: 188 GVANTRFVVANTYELPFEEGYFDSVVC---IFMLHHLDDIPGALRD-------------- 230

Query: 204 SHYRTIADGVSRHLNKDG-LCSVEIGYNQKVDV-------VRIFESRKLFLVNAFKD 252
                    + R L   G + +VE   +   DV         +F      +    KD
Sbjct: 231 ---------IKRVLKPSGEVFAVE-PIDHFHDVQRYPDDWKELFRDAGYEVEVWEKD 277


>gi|170735747|ref|YP_001777007.1| methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
 gi|169817935|gb|ACA92517.1| Methyltransferase type 11 [Burkholderia cenocepacia MC0-3]
          Length = 282

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 99  VRILDLGTGTGAVCLALLKES-PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
            R+LD+G GTGAV LA+ +      +  G+DIS + ++ A++ A   GV  RF       
Sbjct: 50  TRVLDVGCGTGAVTLAVARRLGASAQCTGIDISARMIDAARARAERGGVPARFVCADVQT 109

Query: 158 FSSVEGLFDVIVS 170
            +      D+IVS
Sbjct: 110 HAFEPASVDLIVS 122


>gi|189037618|sp|A9KGL7|UBIG_COXBN RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
          Length = 234

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 28/145 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L++      + +        +LD+G G G +  AL K        GVD+S   +++AK++
Sbjct: 35  LINPVRLKYIEQQITLKGKHVLDVGCGGGLLSEALAKH--GAIVTGVDMSESLIDVAKNH 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A    ++  +     +  +     FD+I                +E+ +  P        
Sbjct: 93  AEQQQLNINYQCQDIEILTKDAQRFDIITC--------------MELLEHVP-------- 130

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 + +    +  +   G    
Sbjct: 131 ----DPQRMIKNCAALIKPGGKLFF 151


>gi|255322708|ref|ZP_05363852.1| methyltransferase small domain protein [Campylobacter showae
           RM3277]
 gi|255300269|gb|EET79542.1| methyltransferase small domain protein [Campylobacter showae
           RM3277]
          Length = 231

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 9/126 (7%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159
            +L++G G+G + L L ++ P      +DI    + +A +NA  NG+   F T     F 
Sbjct: 31  EVLEVGCGSGVLGLLLKRDFPKISLSLLDILEANVNLAAANASQNGLEAEFITADFAKFK 90

Query: 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNK 219
           S E  +D+IVSNPP+            +R      +       L   R +    +  L  
Sbjct: 91  S-EKRYDLIVSNPPFYHDGTKKSENEHLR-----TARYSENLPL---RELVGSANSLLKP 141

Query: 220 DGLCSV 225
            G+ S 
Sbjct: 142 RGVFSF 147


>gi|134045649|ref|YP_001097135.1| type 11 methyltransferase [Methanococcus maripaludis C5]
 gi|150403694|ref|YP_001330988.1| type 11 methyltransferase [Methanococcus maripaludis C7]
 gi|132663274|gb|ABO34920.1| Methyltransferase type 11 [Methanococcus maripaludis C5]
 gi|150034724|gb|ABR66837.1| Methyltransferase type 11 [Methanococcus maripaludis C7]
          Length = 285

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 53/169 (31%), Gaps = 37/169 (21%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A    LP +  ++   ILD+G G G++ + + K  P     GVDI   ++E  K NA  
Sbjct: 128 EAFNSLLPSLNGKN---ILDVGCGIGSLAINMAKAKPESIIYGVDIIDGSIEQCKLNAKI 184

Query: 144 NGVSE-RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
            GV+   F    +      +  FD +              L                   
Sbjct: 185 EGVTNTHFAVASAYELPFEDEYFDTVTC---------FFMLHH----------------- 218

Query: 203 LSHYRTIADGVSRHLNKDG-LCSVE-----IGYNQK-VDVVRIFESRKL 244
           L         + R L   G + +VE      G  +   D   +F     
Sbjct: 219 LDDVAKALQDIKRVLKPSGEVFAVEPIDHFHGVQRGPEDWKALFLEAGY 267


>gi|90579648|ref|ZP_01235457.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14]
 gi|90439222|gb|EAS64404.1| 23S rRNA (uracil-5-)-methyltransferase [Vibrio angustum S14]
          Length = 384

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 16/147 (10%)

Query: 52  HRILGWRDFYNVRLTLSSDTFE---PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
           H +L    F +V L +   +F    P+     + +S  A +   + +     + DL  G 
Sbjct: 199 HYLL--EQFNHVPLVVRPKSFFQTNPK-----VAESLYATAKRWVSEIKPTSMWDLFCGV 251

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS-SVEGLFD 166
           G   L   +E       G++I  +A+E AK +A   GV+  RF  L S  FS S E   +
Sbjct: 252 GGFALHCAEEVE--HVTGIEIEPEAIESAKHSAEIMGVTNLRFAALDSTSFSQSNESAPE 309

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPR 193
           +++ NPP     I + L  ++ DF P+
Sbjct: 310 LVLVNPP--RRGIGEQLCQQLNDFAPK 334


>gi|85058129|ref|YP_453831.1| ribosomal protein L11 methyltransferase [Sodalis glossinidius str.
           'morsitans']
 gi|123520296|sp|Q2NWP9|PRMA_SODGM RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|84778649|dbj|BAE73426.1| ribosomal protein L11 methyltransferase [Sodalis glossinidius str.
           'morsitans']
          Length = 293

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 32/146 (21%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A   +      VG+DI  +A+  ++ NA  NGV+E         
Sbjct: 159 GKTVIDFGCGSGILAIA-ALKLGAAHAVGIDIDPQAILASRDNAQRNGVAELLTL----- 212

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHL 217
                           Y+       L   V   +       G       R +A  +    
Sbjct: 213 ----------------YLPQQQPQDLHANVVVANIL----AGP-----LRELAPLIIDLP 247

Query: 218 NKDGLCSV-EIGYNQKVDVVRIFESR 242
              G   +  I  +Q   V + + + 
Sbjct: 248 LPGGYLGLSGILASQAESVAQAYAAA 273


>gi|19173510|ref|NP_597313.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine
           methyltransferase signature [Encephalitozoon cuniculi
           GB-M1]
 gi|19171099|emb|CAD26489.1| similarity to HYPOTHETICAL PROTEINS with N6-adenine
           methyltransferase signature [Encephalitozoon cuniculi
           GB-M1]
          Length = 199

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS- 155
           +   ILDL  GTG +  A    SP +  +GVD+   ALEI + N  +       D L+  
Sbjct: 48  EGKSILDLCCGTGMLSFACSYFSPSY-ILGVDLCPVALEIFRQN--SLEFQINADLLRCS 104

Query: 156 -DWFSSVEGLFDVIVSNPPY 174
            D    + G FD  + NPP+
Sbjct: 105 IDDLIFINGRFDTAIINPPF 124


>gi|327398976|ref|YP_004339845.1| type 11 methyltransferase [Hippea maritima DSM 10411]
 gi|327181605|gb|AEA33786.1| Methyltransferase type 11 [Hippea maritima DSM 10411]
          Length = 199

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 19/146 (13%)

Query: 65  LTLSSDTFEPRPETELLVD-----------SALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
             ++   FE       LV+           +     +         RILD+G G+G + +
Sbjct: 18  FCIAPPWFETDKIKISLVEGSSFGTGIHETTVSCMEIAEKIDFKGKRILDVGIGSGILSI 77

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           A LK     + VG DI   A+     N   NGVS+      +D  SS+ G FDV+ +N  
Sbjct: 78  AALKLGAK-EAVGFDIEESAIRECIENGKLNGVSDGLVCFVADSPSSISGSFDVVFAN-- 134

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGG 199
            I   I+  +  E+     R++ DGG
Sbjct: 135 -IFDDIILAMCDEI----NRLTKDGG 155


>gi|225571369|ref|ZP_03780365.1| hypothetical protein CLOHYLEM_07467 [Clostridium hylemonae DSM
           15053]
 gi|225159845|gb|EEG72464.1| hypothetical protein CLOHYLEM_07467 [Clostridium hylemonae DSM
           15053]
          Length = 475

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 18/131 (13%)

Query: 52  HRILGWRDFYNVRLTLSSDTF---EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
             I  +    +++  +S  +F    P  +TE L ++AL ++    ++     + DL  G 
Sbjct: 270 AYITDY--IGDIKYQISPLSFYQVNPV-QTERLYETALEYAGLHGDE----TVWDLYCGI 322

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVE 162
           G + L L +++      GV+I  +A+E AK NA  NG+        + + +  + + +  
Sbjct: 323 GTISLFLAQKAK--HVYGVEIVPQAIEDAKKNAQINGIENARFYVGKAEDVLPEKYENDG 380

Query: 163 GLFDVIVSNPP 173
              D+IV +PP
Sbjct: 381 IHADIIVVDPP 391


>gi|242827123|ref|XP_002488767.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218712023|gb|EED11451.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 351

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 44/147 (29%), Gaps = 33/147 (22%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           AL   L         RILD+GTGTG   + +  E P  + +G+D+S              
Sbjct: 104 ALNGHLFISPLSTPQRILDIGTGTGIWAIDIADEYPSAQVIGIDLSP---------IQPG 154

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
            V         D  +              Y +    D +   V          GG  G  
Sbjct: 155 WVPPNVQFYVEDAETEWM-----------YADDDSFDLIHTRVM---------GGSIG-- 192

Query: 205 HYRTIADGVSRHLNKDGLCSVEIGYNQ 231
            +   A     HL  DG    E+   Q
Sbjct: 193 DWDKFASQSYTHLKSDGWL--ELHEPQ 217


>gi|57641720|ref|YP_184198.1| tRNA/rRNA methyltransferase [Thermococcus kodakarensis KOD1]
 gi|57160044|dbj|BAD85974.1| probable tRNA/rRNA methyltransferase [Thermococcus kodakarensis
           KOD1]
          Length = 396

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 21/181 (11%)

Query: 16  GLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHES-IHRIL-GWRDFYNV------RLTL 67
            L   + I++ +  +     F       R  +    I R+L G   +  V      +  +
Sbjct: 134 KLDLAEAIMEAEPEI--ETVFEKNTGRSRRREGLPEIERVLLGKEKYRTVIEEGRAKFIV 191

Query: 68  SSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGV 127
                    +T   +D            +  +R+LD+ T TG   +         + V V
Sbjct: 192 DMR----GQKTGFFLDQRENRIALEKYVKPGMRVLDVFTYTGGFAIHAAVAGAD-EVVAV 246

Query: 128 DISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPPYIESVIVD 181
           D S  A+ + K NA  NGV ++   +    F  +E        FD+++ +PP       D
Sbjct: 247 DKSPWAINMVKENAKLNGVEDKMKYIVGSAFPVMEEMIKRGEKFDIVILDPPAFVQHEKD 306

Query: 182 C 182
            
Sbjct: 307 L 307


>gi|317032892|ref|XP_001394550.2| RNA methylase family protein [Aspergillus niger CBS 513.88]
          Length = 240

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + +        ++D   G G   +A      + +   ++ +   L+ A
Sbjct: 56  TPEPVANKIAEHMAQSAPAGRSILVDAFAGAGGNSIAFALSGRWKRVYAIEKNPAVLQCA 115

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV+++    + D F  ++        + V+ ++PP+            +   +
Sbjct: 116 KHNAKIYGVADKITWFEGDCFEIIKNQLKDLAPYSVVFASPPWGGPGYRSDTVFNLSTME 175

Query: 192 P 192
           P
Sbjct: 176 P 176


>gi|291007089|ref|ZP_06565062.1| methyltransferase (methylase) [Saccharopolyspora erythraea NRRL
           2338]
          Length = 193

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 9/117 (7%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
             R+ +      P  E    V  AL  +L    +    R+LDL  G+GA+ L        
Sbjct: 11  GRRIEVPPRGTRPTSER---VREALFSALESATELAGARVLDLYGGSGALGLE-ALSRGA 66

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD----WFSSVEGLFDVIVSNPPY 174
                V+   +A+++ + NA   G  +     Q        S+    FDV++++PPY
Sbjct: 67  AHATFVESDRRAVQLLRRNASALGFRD-VSVAQGKVETVLASAAGEPFDVVLADPPY 122


>gi|242094784|ref|XP_002437882.1| hypothetical protein SORBIDRAFT_10g004380 [Sorghum bicolor]
 gi|241916105|gb|EER89249.1| hypothetical protein SORBIDRAFT_10g004380 [Sorghum bicolor]
          Length = 209

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            L  +    +      + D G G G + + + L E+     +G+DI  ++LE+A+ NA  
Sbjct: 36  MLYTAENSFDDITGKVVADFGCGCGTLAVGSALLEAE--HVLGIDIDPQSLELAQENAAD 93

Query: 144 NGVSERFDTLQSDWFS-SVEG-LFDVIVSNPPYIESVIVDCLG 184
             +    D + SD  + +++G   D +V NPP+        + 
Sbjct: 94  LELD--IDLVWSDIKNLNLKGVHVDTVVMNPPFGTRRNGADME 134


>gi|238927551|ref|ZP_04659311.1| methyltransferase [Selenomonas flueggei ATCC 43531]
 gi|238884833|gb|EEQ48471.1| methyltransferase [Selenomonas flueggei ATCC 43531]
          Length = 208

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 58/193 (30%), Gaps = 48/193 (24%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
           A+    ++ +   ++LD G G GA     L+        G+D S  ++E A+        
Sbjct: 35  AWGFSHLDLQGSEQVLDCGCGGGANIAVFLRMVDEGHVTGLDYSSVSVEKAREVNHAAIA 94

Query: 147 SERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLS 204
           + R + +Q +       +  FDV+ +               E   F P I+         
Sbjct: 95  AGRCEIVQGNVQELPFDDSQFDVVTA--------------FETVYFWPEIA--------- 131

Query: 205 HYRTIADGVSRHLNKDGLCSV--E-----------------IGYNQKVDVVRIFESRKLF 245
                   V R L   G+  +  E                 +      ++  +       
Sbjct: 132 ---RCFAQVHRVLKPGGMFMITNETSGKTKSHEKWLKIVDGMSVYTGEELESLLRGAGFA 188

Query: 246 LVNAFKDYGGNDR 258
            V   +D   +DR
Sbjct: 189 RVEIDEDLA-HDR 200


>gi|223984268|ref|ZP_03634413.1| hypothetical protein HOLDEFILI_01707 [Holdemania filiformis DSM
           12042]
 gi|223963753|gb|EEF68120.1| hypothetical protein HOLDEFILI_01707 [Holdemania filiformis DSM
           12042]
          Length = 405

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD  T TG+  L    ++   + +  DIS  AL  A+ NA  NG+    + +Q+D F  
Sbjct: 234 VLDCCTHTGSFALN-AAKAGAARVIAADISASALASARHNAQLNGLEAVMEFVQADVFDL 292

Query: 161 VEGL------FDVIVSNPP 173
           +          D I+ +PP
Sbjct: 293 LADPKWKAQGVDYIILDPP 311


>gi|134079238|emb|CAK40721.1| unnamed protein product [Aspergillus niger]
          Length = 266

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 6/121 (4%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           T   V + +A  + +        ++D   G G   +A      + +   ++ +   L+ A
Sbjct: 82  TPEPVANKIAEHMAQSAPAGRSILVDAFAGAGGNSIAFALSGRWKRVYAIEKNPAVLQCA 141

Query: 138 KSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCLGLEVRDFD 191
           K NA   GV+++    + D F  ++        + V+ ++PP+            +   +
Sbjct: 142 KHNAKIYGVADKITWFEGDCFEIIKNQLKDLAPYSVVFASPPWGGPGYRSDTVFNLSTME 201

Query: 192 P 192
           P
Sbjct: 202 P 202


>gi|84516586|ref|ZP_01003945.1| methyltransferase, putative [Loktanella vestfoldensis SKA53]
 gi|84509622|gb|EAQ06080.1| methyltransferase, putative [Loktanella vestfoldensis SKA53]
          Length = 323

 Score = 55.1 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 44/145 (30%), Gaps = 26/145 (17%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD+  A     +  +   R+ DLG G G +  A+L            I  +AL +    A
Sbjct: 166 VDAGSALLAQALPPKLPARMADLGAGWGYLAQAVLARDSVASLDL--IEAEALSLQC--A 221

Query: 142 VTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
             N    R     +D         +D IV NPP+      D                   
Sbjct: 222 RLNVTDPRARFHWADALRFTPDKAYDGIVMNPPFHVGRAADA------------------ 263

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
            GL   R      SR L   G   +
Sbjct: 264 -GLG--RAFIQAASRLLAPHGKLWM 285


>gi|326802550|ref|YP_004320369.1| ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sphingobacterium sp. 21]
 gi|326553314|gb|ADZ81699.1| Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
           [Sphingobacterium sp. 21]
          Length = 244

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 30/142 (21%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
             ++  + +    +ILD+ TGTG     A+    P  K VGVDIS   L +AK      G
Sbjct: 48  KKAIRSLRQLQPKKILDVATGTGDFAFEAINILKPD-KIVGVDISEGMLAVAKEKIAKRG 106

Query: 146 VSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
           V  +F+ +  D       +G FD +              +   VR+F+          GL
Sbjct: 107 VGNKFEVVLGDSEGLPFDDGSFDAV-------------TVAFGVRNFENL------EKGL 147

Query: 204 SHYRTIADGVSRHLNKDGLCSV 225
           +          R L   G   +
Sbjct: 148 ADI-------CRVLRPGGKAVI 162


>gi|325694027|gb|EGD35945.1| O-methyltransferase [Streptococcus sanguinis SK150]
          Length = 227

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 38/81 (46%), Gaps = 3/81 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKDNFAKYDSHQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVS 170
           L+    D   ++E  +D++  
Sbjct: 124 LEGDAVDLLETLEDSYDLVFM 144


>gi|303229651|ref|ZP_07316439.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302515776|gb|EFL57730.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 576

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 17/139 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           ++R TLS  +F      +T +L D ALA++    + +    ++D   GTG + L L  ++
Sbjct: 303 DLRFTLSPHSFFQVNPEQTTVLYDQALAYA----DLKGDEIVIDAYCGTGTISLFLAHKA 358

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLF------DVIVSNPP 173
                +G++I   A+  A+ NA  NG  +  + + +D    +  L+      DVIV +P 
Sbjct: 359 K--HVIGIEIVEPAIINARENARRNGY-DNTEFIVADAAVEMPKLYKAGVRPDVIVFDP- 414

Query: 174 YIESVIVDCLGLEVRDFDP 192
            I +   + +       +P
Sbjct: 415 -IRAGCKEEVLTSAASMEP 432


>gi|238792621|ref|ZP_04636253.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia intermedia ATCC 29909]
 gi|238727977|gb|EEQ19499.1| cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating]
           [Yersinia intermedia ATCC 29909]
          Length = 176

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++  A +L R+E      ++D+G GTG+V L      P  +   ++ +  AL +   N  
Sbjct: 4   EAVRALALERLELPCYGHLIDVGAGTGSVALEAALRFPDLQVTAIERNPAALALISENRQ 63

Query: 143 TNGVSE 148
             G   
Sbjct: 64  RLGCHN 69


>gi|226310579|ref|YP_002770473.1| 23S rRNA (uracil-5-)-methyltransferase [Brevibacillus brevis NBRC
           100599]
 gi|226093527|dbj|BAH41969.1| probable 23S rRNA (uracil-5-)-methyltransferase [Brevibacillus
           brevis NBRC 100599]
          Length = 460

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 13/100 (13%)

Query: 101 ILDLGTGTGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSE------RFDTL 153
           +LDL  GTG + L L    P+ +   G+++  +A+E A  NA  N  +       R + L
Sbjct: 318 VLDLYCGTGTIGLWLA---PYAREVRGIELIPEAVEDANRNAERNQAANASFHVGRAEVL 374

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPR 193
              W        DV+V +PP   + + D L   + D  P+
Sbjct: 375 MPKWAKQ-GTRPDVVVVDPP--RTGLDDALIRSLLDVLPK 411


>gi|218767557|ref|YP_002342069.1| ribosomal protein L11 methyltransferase [Neisseria meningitidis
           Z2491]
 gi|38605480|sp|Q9JW08|PRMA_NEIMA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|121051565|emb|CAM07863.1| putative ribosomal protein L11 methyltransferase [Neisseria
           meningitidis Z2491]
 gi|319409821|emb|CBY90129.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Neisseria
           meningitidis WUE 2594]
          Length = 295

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK    F  VGVDI  +A+   K NA  N V  +F     
Sbjct: 162 KNGESVLDYGCGSGILTIAALKLGAGF-AVGVDIDEQAVRAGKDNAEQNNVDAQFFLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 221 L----PQGQFDVVVAN 232


>gi|327461593|gb|EGF07924.1| O-methyltransferase [Streptococcus sanguinis SK1]
          Length = 227

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  VESFQPKKILEIGTAIGFSTLLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   ++E  +D++     +++S     +                          
Sbjct: 124 LEGDAVDLLETLEDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLVLI---DDVFQGGDVAKPFEE 185


>gi|292669225|ref|ZP_06602651.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292649066|gb|EFF67038.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 261

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 27/143 (18%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
            A  + L   +     R+L++    G   +AL  E+   +  G+D++  AL  A++N   
Sbjct: 33  EATEWLLGHADFTADTRVLEVACNMGTTMIALA-EAHGCRITGLDMNPAALAKARANIAK 91

Query: 144 NGVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
           NG+ +  D ++ +       +  FDV+      I   ++  L  E +             
Sbjct: 92  NGMEDVIDVVEGNAMALPFPDESFDVV------INEAMLTMLPRENKK------------ 133

Query: 202 GLSHYRTIADGVSRHLNKDGLCS 224
                + IA+   R L   G   
Sbjct: 134 -----KAIAEY-FRVLKPGGTLL 150


>gi|255311574|ref|ZP_05354144.1| rRNA methyltransferase [Chlamydia trachomatis 6276]
 gi|255317875|ref|ZP_05359121.1| rRNA methyltransferase [Chlamydia trachomatis 6276s]
          Length = 396

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 13/131 (9%)

Query: 53  RILGWRDFYNVRLTLSSDT----FEPRP---ETELLVDSALAFSLPRIEKRDVVRILDLG 105
            + G   F   +L++   +      PR       L  +  +      I+      +LDL 
Sbjct: 200 HLYG-APFLKQQLSIDGRSSLFHIRPRSFFQPQSLQAEKIIQTIKEFIDPCGEETLLDLY 258

Query: 106 TGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVE 162
            G G + + L       K +GV++   A+  A+ N   N V       D  Q    +   
Sbjct: 259 CGAGIISILLAPYVK--KIIGVELVPDAVASAQENIQLNSVDMEVFLEDAKQFCKRNENL 316

Query: 163 GLFDVIVSNPP 173
              D++V +PP
Sbjct: 317 PSPDIVVIDPP 327


>gi|229163055|ref|ZP_04291011.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803]
 gi|228620461|gb|EEK77331.1| Biotin biosynthesis protein BioC [Bacillus cereus R309803]
          Length = 242

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 5/106 (4%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L+    R      +RIL+LG GTG V   L K  P      VD + + + +AK     N 
Sbjct: 6   LSTLNRRYSANSSIRILELGCGTGYVTEQLSKVFPKAHITAVDFAHEMIAVAK---TRNN 62

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
           V      L  D     +E  +DVI+SN  +     +      + ++
Sbjct: 63  VG-NVKFLCEDIEQLKLEASYDVIISNATFQWLNDLKATVKNLFNY 107


>gi|254361966|ref|ZP_04978097.1| tRNA (uracil-5-)-methyltransferase [Mannheimia haemolytica PHL213]
 gi|261493685|ref|ZP_05990204.1| 23S rRNA 5-methyluridine methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261494352|ref|ZP_05990846.1| 23S rRNA 5-methyluridine methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|153093513|gb|EDN74493.1| tRNA (uracil-5-)-methyltransferase [Mannheimia haemolytica PHL213]
 gi|261310001|gb|EEY11210.1| 23S rRNA 5-methyluridine methyltransferase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310685|gb|EEY11869.1| 23S rRNA 5-methyluridine methyltransferase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 439

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 51  IHRILGWRDFY---NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
           I  + G R +Y    ++L  S   F        L +  +  +L  +E  +  R+LDL  G
Sbjct: 246 IEHLCGERPYYQIQGLKLHFSIRDFI--QVNATLNEKMVEKALEWLELSNQDRVLDLFCG 303

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
            G   L + + +     VGV+     ++ A+ NAVT+G+    +  Q++        
Sbjct: 304 MGNFTLPIAERAK--SVVGVEGVEPMVQQARENAVTSGLK-NVEFYQTNLDEPFSDK 357


>gi|146414882|ref|XP_001483411.1| hypothetical protein PGUG_04140 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 256

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEK---RDVVRILDLGTGTGAVCL 113
           W+  Y++        +        +   ALA  + R+ K    +  +ILD+  G G   +
Sbjct: 27  WKKRYDLFSRFDEGVYMTSELWYSVTPEALAIFIARLVKELLPNARKILDVCCGGGGNAI 86

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
                 P      VDI    L+    NA   GV +R  T   DW + ++   D I    P
Sbjct: 87  QFAHYFP--SVGAVDILPNNLQCTVHNAGIYGVLDRIWTQLGDW-NELQNKTDWI----P 139

Query: 174 YIESVIVDCLGLEVRDF 190
           Y   +    L  E+ DF
Sbjct: 140 YGIRMKNKKLKNEMFDF 156


>gi|308803496|ref|XP_003079061.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri]
 gi|116057515|emb|CAL51942.1| ribosomal protein L11 methyltransferase (ISS) [Ostreococcus tauri]
          Length = 811

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 16/115 (13%)

Query: 86  LAFSLPRIEKRDVVR-ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           L +    I +R     ++D G G+G + +  L      + VGVD++ +A++ +  NA  N
Sbjct: 654 LRWLKKTISQRARTELVVDFGCGSGVLAIGALLLGAE-RAVGVDLARQAVQSSMDNAKLN 712

Query: 145 GVSERFDTLQSDWFSS----VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
           GV  R  T   D          G  DV+++N           L   V + +P  +
Sbjct: 713 GVEHRLSTFLGDGTDPGTPGANGQADVVIAN----------ILIQPVLELEPLFA 757


>gi|487713|emb|CAA55769.1| lmbW [Streptomyces lincolnensis]
          Length = 318

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 37/74 (50%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERF 150
             +  R   R+LD+G G G + +      P   G+G+DI   A+E+A+  A   GV++R 
Sbjct: 133 EAMRGRGARRVLDVGCGGGQLLVDACLRDPSLTGIGLDIDPAAVEVAQDLAERQGVADRV 192

Query: 151 DTLQSDWFSSVEGL 164
           + +  D F+  +  
Sbjct: 193 EFVVGDAFAPADWP 206


>gi|1546793|gb|AAC57943.1| DNA adenine methyltransferase [Paramecium bursaria Chlorella virus
           SC1A]
          Length = 372

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 19/131 (14%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +L+   G+G   +      P     GV++      I+K N   +           D
Sbjct: 42  NPQSVLEPSCGSGEFLVECETRFPTASITGVELDETLASISKENTTRS------TIYTQD 95

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
           + +  EG FD+I+ NPP+++   V+      R                +   +   +++H
Sbjct: 96  FLTFDEGKFDLIIGNPPFVQMKTVNKQASSGRSN-------------LYIEILFKCMTQH 142

Query: 217 LNKDGLCSVEI 227
           LN +G+ ++ I
Sbjct: 143 LNDNGVLAMVI 153


>gi|37679000|ref|NP_933609.1| type I restriction-modification system methyltransferase subunit
           [Vibrio vulnificus YJ016]
 gi|37197742|dbj|BAC93580.1| type I restriction-modification system methyltransferase subunit
           [Vibrio vulnificus YJ016]
          Length = 546

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 19/122 (15%)

Query: 72  FEPRPETELLVDSA-LAFSLPRIEKRDVV-RILDLGTGTGAVCLALLKESPFF-----KG 124
           + P+P + +L +   L    P++ K++ + R+LD   G+G++ L + K          K 
Sbjct: 210 YTPQPISTILSEIVTLDSQEPKMGKKNKLNRVLDFACGSGSLLLNVRKHITVAGGSIGKI 269

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-----------LFDVIVSNP 172
            G + +     +A+ N + +GV +  FD    D   +               FD +V+NP
Sbjct: 270 YGQEKNITTYNLARMNMLLHGVKDTEFDIFHGDTLFNDWELLNEKNPAKKLKFDAVVANP 329

Query: 173 PY 174
           P+
Sbjct: 330 PF 331


>gi|324995373|gb|EGC27285.1| O-methyltransferase [Streptococcus sanguinis SK678]
          Length = 227

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVS 170
           L+    D   ++E  +D++  
Sbjct: 124 LEGDAVDLLETLEDSYDLVFM 144


>gi|282898476|ref|ZP_06306466.1| 23S rRNA methyltransferase/RumA [Raphidiopsis brookii D9]
 gi|281196642|gb|EFA71548.1| 23S rRNA methyltransferase/RumA [Raphidiopsis brookii D9]
          Length = 453

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F  +   +  DTF          ++ L     ++  +    ++D   G G + L L K++
Sbjct: 274 FAGLEFKVRPDTFF--QVYTETAEALLEVIQSQLNLQGDEILVDAYCGIGTLTLPLAKQA 331

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE---RFDTLQSDWFSSVEGLFDVIVSNPP 173
              + +G++I   A+E A  NA  NG+     +   ++ D    +E + D+++ +PP
Sbjct: 332 R--QTIGLEIQPAAVEQAICNAQHNGIINAKFQIGAVE-DILPKLETVPDIVLLDPP 385


>gi|256785429|ref|ZP_05523860.1| methyltransferase [Streptomyces lividans TK24]
 gi|289769327|ref|ZP_06528705.1| methyltransferase [Streptomyces lividans TK24]
 gi|289699526|gb|EFD66955.1| methyltransferase [Streptomyces lividans TK24]
          Length = 208

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 66/185 (35%), Gaps = 44/185 (23%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           F++           PRP    LV++                 LDLG G+G   L L +  
Sbjct: 9   FWDGVYAARPAPDAPRPNVR-LVETV--------TGLPPGDALDLGCGSGGDALWLARR- 58

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESV 178
             ++   VDIS  A E    +A T+G+ +  D ++ D   S  EG FD++ ++  Y+ + 
Sbjct: 59  -GWRVTAVDISGVAAERLAGHARTHGLGDLVDAVRHDLRGSFPEGRFDLVSAH--YLHTP 115

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE-IG------YNQ 231
                      FD   +            ++  G +  L   G   V   G      ++Q
Sbjct: 116 -----------FDLDRA------------SVLRGAAHALRPGGRLLVVDHGSTAPWSWDQ 152

Query: 232 KVDVV 236
             D  
Sbjct: 153 DPDAR 157


>gi|222087589|ref|YP_002546126.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
 gi|221725037|gb|ACM28193.1| cyclopropane-fatty-acyl-phospholipid synthase protein
           [Agrobacterium radiobacter K84]
          Length = 405

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 27/132 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN--AVTNGVSERFDTL 153
                ILD+G G G + L L +++P    +GV +S +  + A     A  +G        
Sbjct: 152 EPDNSILDIGCGWGGLALHLAEQAPGGYVLGVTLSEEQHDYASKRVPASLSGAPAEVQFA 211

Query: 154 QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
             D + S+ G FD IVS                V  F+          GLS YRT     
Sbjct: 212 LRD-YRSLTGRFDRIVS----------------VGMFE--------HVGLSSYRTFFRKC 246

Query: 214 SRHLNKDGLCSV 225
           +  L  DG+  +
Sbjct: 247 AELLEDDGVMVL 258


>gi|218704283|ref|YP_002411802.1| 23S rRNA methyluridine methyltransferase [Escherichia coli UMN026]
 gi|293404163|ref|ZP_06648157.1| 23S rRNA (uracil-5-)-methyltransferase rumB [Escherichia coli
           FVEC1412]
 gi|298379946|ref|ZP_06989551.1| TrmA family RNA methyltransferase [Escherichia coli FVEC1302]
 gi|300901222|ref|ZP_07119324.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           198-1]
 gi|226725406|sp|B7NAK5|RUMB_ECOLU RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|218431380|emb|CAR12258.1| 23S rRNA m(5)U747 methyltransferase [Escherichia coli UMN026]
 gi|291428749|gb|EFF01774.1| 23S rRNA (uracil-5-)-methyltransferase rumB [Escherichia coli
           FVEC1412]
 gi|298279644|gb|EFI21152.1| TrmA family RNA methyltransferase [Escherichia coli FVEC1302]
 gi|300355347|gb|EFJ71217.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Escherichia coli MS
           198-1]
          Length = 375

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 64  RLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           R         P+   +    +     A +   + +  V  + DL  G G   L     +P
Sbjct: 197 RFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVNHMWDLFCGVGGFGLHCA--TP 254

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLF-DVIVSNPP 173
             +  G++I+ +A+  AK +A   G++  +F  L S  F++ +G   ++++ NPP
Sbjct: 255 DMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPP 309


>gi|168179294|ref|ZP_02613958.1| 23S rRNA -methyltransferase RumA [Clostridium botulinum NCTC 2916]
 gi|182669610|gb|EDT81586.1| 23S rRNA -methyltransferase RumA [Clostridium botulinum NCTC 2916]
          Length = 450

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 14/145 (9%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   +   ++  ++ + F          +   +     +       + DL  GTG + 
Sbjct: 267 YII--EELLGLKFKIAPEAFFQTNSKG--AEKLYSIVKDFLGDASSKVVFDLYCGTGTIG 322

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIV 169
             +   +   K +GV++  +A++ A  NA  NG+    + +  D       V+   D+I+
Sbjct: 323 QIVAPRAK--KVIGVELIEEAVKAANENAKLNGL-NNCEFIAGDVAKVIKDVKQKPDIII 379

Query: 170 SNPPYIESVIVDCLGLE-VRDFDPR 193
            +PP      V  + LE V  F+P+
Sbjct: 380 LDPP---RPGVHPVALEYVVKFEPK 401


>gi|160943467|ref|ZP_02090700.1| hypothetical protein FAEPRAM212_00957 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445146|gb|EDP22149.1| hypothetical protein FAEPRAM212_00957 [Faecalibacterium prausnitzii
           M21/2]
          Length = 244

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 18/156 (11%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK--ALEIAKSNAVTNGVSERFD 151
           E +   +  DL +G G V L             +++  +  AL  A   AV         
Sbjct: 54  EPKRSQKAADLCSGCGIVALEWHDRGHRGPCTALELQPEGSALLAA---AVEEQQLTHIT 110

Query: 152 TLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVR-DFDPRISLDGGIDGLSHYRT 208
              +D   +   EG FDV   NPPY                 +   +L            
Sbjct: 111 PACADLRTWRQDEGQFDVCACNPPYFTEGPQSKNAAHALARHENTCAL----------ED 160

Query: 209 IADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKL 244
           +     R L   G  ++     +  +V+ +  + +L
Sbjct: 161 VCACGFRLLKDGGRLALCHRPERLAEVLAVLRAHRL 196


>gi|78486190|ref|YP_392115.1| methyltransferase small [Thiomicrospira crunogena XCL-2]
 gi|78364476|gb|ABB42441.1| SAM-dependent methyltransferase [Thiomicrospira crunogena XCL-2]
          Length = 398

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 32/134 (23%)

Query: 101 ILDLGT---GTGA-VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +LD+ +   G G    +A  KE        VD S  AL+    NA  NGV+E+  T++ +
Sbjct: 224 VLDVFSYLGGWGIEAAVAGAKE-----VTCVDASTFALDGVDRNAELNGVAEKVITIEGN 278

Query: 157 WFSSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
            F  ++        +DV++ +PP       D                 G DG   YR I 
Sbjct: 279 AFDVLKALATEAHKYDVVIVDPPAFVKRKKDFK--------------AGADG---YRRIN 321

Query: 211 DGVSRHLNKDGLCS 224
           +   R LN DG+  
Sbjct: 322 ELAMRLLNPDGILV 335


>gi|312898769|ref|ZP_07758158.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620200|gb|EFQ03771.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 408

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              +LD  T TGA  L             VDIS +A+E   SN   NG S     +Q++ 
Sbjct: 233 GKHVLDCFTHTGAFALN-AARGGAVSVTAVDISEEAVERTISNIEKNGFSSTVKAVQANV 291

Query: 158 FSSVEGL-------FDVIVSNPPYIESVIVDCLGLEVRDF 190
           F  +  L       +D I+ +PP         L    R +
Sbjct: 292 FDLLTQLAEEKNRDYDFIILDPPAFTKSG-HTLKNAYRGY 330


>gi|254779596|ref|YP_003057702.1| Cyclopropane-fatty-acyl-phospholipid synthase (Cyclopropane fatty
           acid synthase) (CFA synthase) [Helicobacter pylori B38]
 gi|254001508|emb|CAX29526.1| Cyclopropane-fatty-acyl-phospholipid synthase (Cyclopropane fatty
           acid synthase) (CFA synthase) [Helicobacter pylori B38]
          Length = 389

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKQGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ +R     L           
Sbjct: 171 GWGYLSVKAAQEY-GAEVMGITISSEQYKQANKRVQELGLEDRVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L   G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKTGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|194290733|ref|YP_002006640.1| ribosomal protein l11 methyltransferase [Cupriavidus taiwanensis
           LMG 19424]
 gi|226710068|sp|B3R6K3|PRMA_CUPTR RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|193224568|emb|CAQ70579.1| Ribosomal protein L11 methyltransferase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 297

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L  +L          +LD G G+G + + + ++      VG+DI   A+E 
Sbjct: 150 PTTRLCMQWLEQNL-----TPGETVLDYGCGSGILAI-VARKLGAGDTVGIDIDPNAVEA 203

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           ++ NA  N V   F   +S   +S + +   I+SNP
Sbjct: 204 SRYNAERNHVEASFALPESVSDASYDLVVANILSNP 239


>gi|153207274|ref|ZP_01946038.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           'MSU Goat Q177']
 gi|165918676|ref|ZP_02218762.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii RSA
           334]
 gi|212218182|ref|YP_002304969.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           CbuK_Q154]
 gi|226725538|sp|B6J5Y2|UBIG_COXB1 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|120576762|gb|EAX33386.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii
           'MSU Goat Q177']
 gi|165917611|gb|EDR36215.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii RSA
           334]
 gi|212012444|gb|ACJ19824.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii
           CbuK_Q154]
          Length = 234

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 28/145 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L++      + +        +LD+G G G +  AL K        GVD+S   +++AK++
Sbjct: 35  LINPVRLKYIEQQITLKGKHVLDVGCGGGLLSEALAKH--GAIVTGVDMSESLIDVAKNH 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A    ++  +     +  +     FD+I                +E+ +  P        
Sbjct: 93  AEQQQLNINYQCQDIEILTKDAQRFDIITC--------------MELLEHVP-------- 130

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 + +    +  +   G    
Sbjct: 131 ----DPQRMIKNCAALIKPGGKLFF 151


>gi|118594163|ref|ZP_01551510.1| ribosomal protein L11 methyltransferase [Methylophilales bacterium
           HTCC2181]
 gi|118439941|gb|EAV46568.1| ribosomal protein L11 methyltransferase [Methylophilales bacterium
           HTCC2181]
          Length = 294

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T L ++  L              +LD G G+G + +   K+      +GVDI  +A+ 
Sbjct: 147 PTTHLCIEWLLDNM------EKGDNVLDYGCGSGILAI-CAKKLGANNVLGVDIDPQAII 199

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            +  NA  N VS R +  +     S     ++IV+N
Sbjct: 200 ASNQNAAINNVSIRLNDTK----ESFSFQSNIIVAN 231


>gi|300794745|ref|NP_001179145.1| putative methyltransferase METT10D [Bos taurus]
 gi|297486612|ref|XP_002695737.1| PREDICTED: methyltransferase 10 domain containing-like [Bos taurus]
 gi|296476897|gb|DAA19012.1| methyltransferase 10 domain containing-like [Bos taurus]
          Length = 561

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 26/185 (14%)

Query: 58  RDFYNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           R+ + + + +  +   P    R      V+  +       +K  + R +D+GTG   +  
Sbjct: 61  REDFGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QNSDKSTLRRGIDIGTGASCIYP 118

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLF 165
            L      +  +  ++       AK N   N +S+            L        E ++
Sbjct: 119 LLGTTLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIY 178

Query: 166 DVIVSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GV 213
           D  + NPP+  +            R   P     GG      +G  L   + I      +
Sbjct: 179 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL 238

Query: 214 SRHLN 218
            + L 
Sbjct: 239 KKRLR 243


>gi|13541750|ref|NP_111438.1| precorrin-6Y methylase [Thermoplasma volcanium GSS1]
 gi|48428139|sp|Q97A64|CBIT_THEVO RecName: Full=Probable cobalt-precorrin-6Y C(15)-methyltransferase
           [decarboxylating]
 gi|14325163|dbj|BAB60088.1| precorrin-8w decarboxylase [Thermoplasma volcanium GSS1]
          Length = 201

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 66  TLSSDTFEPRPETELLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK-ESPFFK 123
            ++ D+   R +   +  +     SL R+  R+    LD+GTGTG+V + + +   P  K
Sbjct: 12  IVTPDSLFERVDGIPMTKEEIRLISLNRLGVRNGGHFLDIGTGTGSVAVDMSRLAGPNGK 71

Query: 124 GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDVI 168
            + +D   KA+++A+ N       +    + +D ++ S    FD I
Sbjct: 72  IIALDRDEKAIKLARINLDRLSPYKNIQLVLADAYAYSPADSFDAI 117


>gi|325847814|ref|ZP_08170036.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325480832|gb|EGC83885.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 548

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 11/135 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
           +++  +S  +F  +P      +     ++          +LDL +GTG +     K +  
Sbjct: 278 DLKFQISPFSF-FQPNVFT-AEKIYQKAIELANVDKNKNVLDLYSGTGTITQLFAKAANK 335

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE---GLFDVIVSNPP---YI 175
              VG++I  +A+E A  NA  N + E  + +  D    ++   G +D++V +PP     
Sbjct: 336 A--VGIEIVEEAVEKAFDNAKENQI-ENINFIAGDVLEKIDLVKGKYDIVVLDPPREGIN 392

Query: 176 ESVIVDCLGLEVRDF 190
              I   + +  ++F
Sbjct: 393 PKAIKKIMDINPKEF 407


>gi|311695751|gb|ADP98624.1| methyltransferase [marine bacterium HP15]
          Length = 236

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 24/125 (19%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           +LD+G G+G   + L K     + VG +I+   ++ A + A    VS      Q D    
Sbjct: 92  VLDIGCGSGGYAVGLAKRI-GCRVVGFEINESGVKTANALAEDEKVSALVKFEQHDASEE 150

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           +           PY ++        +V    PR             R +     R L   
Sbjct: 151 L-----------PYEDNSFDAIYSTDVLCHVPRR------------REVLSNTQRLLKPG 187

Query: 221 GLCSV 225
           G    
Sbjct: 188 GKFVF 192


>gi|304437464|ref|ZP_07397422.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369514|gb|EFM23181.1| UbiE/COQ5 family methyltransferase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 208

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 58/195 (29%), Gaps = 48/195 (24%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
             A+    ++ +   ++LD G G GA     L+        G+D S  ++E A+      
Sbjct: 33  VAAWGFSHLDLQGSEQVLDCGCGGGANIAVFLRMVDEGHVTGLDYSSVSVEKAREVNHAA 92

Query: 145 GVSERFDTLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             + R + +Q +       +  FDV+ +               E   F P I+       
Sbjct: 93  IEAGRCEIVQGNVQELPFDDSQFDVVTA--------------FETVYFWPEIA------- 131

Query: 203 LSHYRTIADGVSRHLNKDGLCSV--E-----------------IGYNQKVDVVRIFESRK 243
                     V R L   G+  +  E                 +      ++  +     
Sbjct: 132 -----RCFAQVHRVLKPGGMFMITNETSGKTKSHEKWLKIVDGMSVYTGEELESLLRGAG 186

Query: 244 LFLVNAFKDYGGNDR 258
              V   +D   +DR
Sbjct: 187 FARVEIDEDLA-HDR 200


>gi|87301259|ref|ZP_01084100.1| possible methyltransferase [Synechococcus sp. WH 5701]
 gi|87284227|gb|EAQ76180.1| possible methyltransferase [Synechococcus sp. WH 5701]
          Length = 441

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E    VR+LD G GTG     L   +P  + + VDIS  ALE+A+     +G +    +L
Sbjct: 88  EAGPPVRLLDAGCGTGVSTDYLAHLNPGAEILAVDISAGALEVARERLRRSGGARHCSSL 147

Query: 154 ----QSDWFSSVEGLFDVIVS 170
               +S      EG FD+I S
Sbjct: 148 RLEQRSLLELDGEGPFDLINS 168


>gi|326798466|ref|YP_004316285.1| methyltransferase type 11 [Sphingobacterium sp. 21]
 gi|326549230|gb|ADZ77615.1| Methyltransferase type 11 [Sphingobacterium sp. 21]
          Length = 196

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           + +   L   +      I DLG G G + +   KE     GVGVDI    ++ A  NA  
Sbjct: 53  AVVEAMLQIAQVNKNDLIYDLGCGDGRIVITAAKEY-GATGVGVDIDPNRIKEANRNAQK 111

Query: 144 NGVSERFDTLQSDWFS 159
            GVS++   LQ D F 
Sbjct: 112 EGVSDKVQFLQQDLFD 127


>gi|305431704|ref|ZP_07400873.1| methyltransferase [Campylobacter coli JV20]
 gi|304445299|gb|EFM37943.1| methyltransferase [Campylobacter coli JV20]
          Length = 210

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 59/181 (32%)

Query: 97  DVVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              R+LD+G GTG  + L L K+   F+  G+DIS + ++ A+       +      ++ 
Sbjct: 46  PNSRVLDIGCGTGYPIALYLSKQ--GFQVTGIDISEEMIKQAQK----LNLHNATFLVED 99

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-----IA 210
                 +  +D I++                              D + H R      I 
Sbjct: 100 ILNFKTDKKYDAIIA-----------------------------FDSIWHIRYDKQECIY 130

Query: 211 DGVSRHLNKDGLCSVEIGYNQK------------------VDVVRIFESRKLFLVNAFKD 252
             +S  L   GL     G N                      V ++ +     ++++ +D
Sbjct: 131 QIISSLLTSGGLFLFTHGKNDGEIISTMWKESFYHSALDLEKVHKLLKQNGFDILSSIED 190

Query: 253 Y 253
           Y
Sbjct: 191 Y 191


>gi|295109242|emb|CBL23195.1| SAM-dependent methyltransferase [Ruminococcus obeum A2-162]
          Length = 400

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD  T TG+  L         +  GVD S  A+  A+ NA  NG+ +    +  D F
Sbjct: 224 ARVLDCFTHTGSFALNAGIAGAK-EVTGVDASELAVHQAQENAKLNGLDKTVKFICEDVF 282

Query: 159 SSVEG------LFDVIVSNPP 173
             +         +DV++ +PP
Sbjct: 283 ELLPKLEEEGEKYDVVILDPP 303


>gi|294788574|ref|ZP_06753816.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC
           29453]
 gi|294483451|gb|EFG31136.1| ribosomal protein L11 methyltransferase [Simonsiella muelleri ATCC
           29453]
          Length = 296

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L   L   E      +LD G G+G + +A LK        GVDI  +A+  
Sbjct: 148 PTTHLCLQWLDLHLQGGEN-----VLDYGCGSGILAIAALKLGAGS-ATGVDIDPQAIIA 201

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
           ++ NA  N V  +      D     EG FDV+V+N
Sbjct: 202 SQDNATQNHV--QAAFYLPDTLP--EGQFDVVVAN 232


>gi|290890708|ref|ZP_06553778.1| hypothetical protein AWRIB429_1168 [Oenococcus oeni AWRIB429]
 gi|290479683|gb|EFD88337.1| hypothetical protein AWRIB429_1168 [Oenococcus oeni AWRIB429]
          Length = 395

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 29/153 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L ++      R+LD+G+G G + +   KE    K +G+ +S +  E  K     N 
Sbjct: 153 VRHILYKLHPAAGGRLLDIGSGWGTLIITAAKEF-HLKTIGITLSEEQYEYTKKQIQDNN 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLS 204
           + E+ +    D+    +  FD + S                V  F+      G  + GL 
Sbjct: 212 LQEQVEVRLMDYRDLKDEQFDYVTS----------------VGMFE----HVGKENLGLY 251

Query: 205 HYRTIADGVSRHLNKDGLCSV--EIGYNQKVDV 235
                   +   L  +G   +    G +Q V V
Sbjct: 252 F-----KKIKELLMPNGRALIHGITGQHQGVGV 279


>gi|238919312|ref|YP_002932827.1| hypothetical protein NT01EI_1402 [Edwardsiella ictaluri 93-146]
 gi|238868881|gb|ACR68592.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 405

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 25/124 (20%)

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVE---- 162
           TGA  ++ L          VD S  AL+IA+ N   NG+   R D L+ D F  +     
Sbjct: 230 TGAFAVSTLM-GGCAHVTSVDTSQAALDIARQNVELNGLDLARADFLRDDVFQLLRRYRD 288

Query: 163 --GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
               FD+IV +PP              +  + +  L G   G   Y+ I     + L   
Sbjct: 289 EGTTFDLIVMDPP--------------KFVENKNQLAGACRG---YKDINMLALQLLRPG 331

Query: 221 GLCS 224
           G+  
Sbjct: 332 GILL 335


>gi|226311627|ref|YP_002771521.1| hypothetical protein BBR47_20400 [Brevibacillus brevis NBRC 100599]
 gi|226094575|dbj|BAH43017.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 431

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 7/83 (8%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D   +L+  T TG+  L   K     K   +DIS  A+E AK N   NG   R D + ++
Sbjct: 253 DGAEVLECFTHTGSFTLNACKHGAK-KVTALDISEHAIETAKRNITLNGFLHRVDFVVAN 311

Query: 157 WFSSVE------GLFDVIVSNPP 173
            F  +         +DV++ +PP
Sbjct: 312 AFDYLRENVEAGKSWDVVILDPP 334


>gi|171463026|ref|YP_001797139.1| ribosomal protein L11 methyltransferase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|226710098|sp|B1XT48|PRMA_POLNS RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|171192564|gb|ACB43525.1| ribosomal protein L11 methyltransferase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 328

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L +        +LD G G+G + +A  K       +G DI  +A+  A+SNA  N  + 
Sbjct: 164 WLEQQSHLKNQSLLDYGCGSGILAIAAAKLGCNP-VIGTDIDPQAMVAARSNADINHTAV 222

Query: 149 RFDTLQSDWFS-SVEGLFDVIVSN 171
            F          + E  +D++++N
Sbjct: 223 TFVLPNEGATELAAETKYDIVMAN 246


>gi|118587368|ref|ZP_01544794.1| cyclopropane-fatty-acyl-phospholipid synthase [Oenococcus oeni ATCC
           BAA-1163]
 gi|75754129|emb|CAH41006.1| cyclopropane-fatty-acyl-phospholipid synthase [Oenococcus oeni]
 gi|118432192|gb|EAV38932.1| cyclopropane-fatty-acyl-phospholipid synthase [Oenococcus oeni ATCC
           BAA-1163]
          Length = 395

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 29/153 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L ++      R+LD+G+G G + +   KE    K +G+ +S +  E  K     N 
Sbjct: 153 VRHILYKLHPAAGGRLLDIGSGWGTLIITAAKEF-HLKTIGITLSEEQYEYTKKQIQDNN 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLS 204
           + E+ +    D+    +  FD + S                V  F+      G  + GL 
Sbjct: 212 LQEQVEVRLMDYRDLKDEQFDYVTS----------------VGMFE----HVGKENLGLY 251

Query: 205 HYRTIADGVSRHLNKDGLCSV--EIGYNQKVDV 235
                   +   L  +G   +    G +Q V V
Sbjct: 252 F-----KKIKELLMPNGRALIHGITGQHQGVGV 279


>gi|146277053|ref|YP_001167212.1| Mg-protoporphyrin IX methyl transferase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145555294|gb|ABP69907.1| magnesium protoporphyrin O-methyltransferase [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 222

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFF 122
           RLT S+     R       D+  A  L R+ K    +R+LD G G G +   L       
Sbjct: 25  RLTSSAPVSRVRQTVREGRDTMRAKMLWRLPKDLTGLRVLDAGCGAGQMTAELAAR--GA 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           +   VDIS + +EIA+   +     +R      D  S   G FD +V+
Sbjct: 83  QVTAVDISPQLVEIARK-RLPPEHLDRVTFASGDMLSDDLGPFDYVVA 129


>gi|57168148|ref|ZP_00367287.1| methyltransferase Atu0936 , putative [Campylobacter coli RM2228]
 gi|57020522|gb|EAL57191.1| methyltransferase Atu0936 , putative [Campylobacter coli RM2228]
          Length = 202

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 58/181 (32%), Gaps = 59/181 (32%)

Query: 97  DVVRILDLGTGTG-AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
              R+LD+G GTG  + L L K+   F+  G+DIS + ++ A+       +      ++ 
Sbjct: 38  PNSRVLDIGCGTGYPIALYLSKQ--GFQVTGIDISEEMIKQAQK----LNLHNATFLVED 91

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT-----IA 210
                 +  +D I++                              D + H R      I 
Sbjct: 92  ILNFKTDKKYDAIIA-----------------------------FDSIWHIRYDKQECIY 122

Query: 211 DGVSRHLNKDGLCSVEIGYNQK------------------VDVVRIFESRKLFLVNAFKD 252
             +S  L   GL     G N                      V ++ +     ++++ +D
Sbjct: 123 QIISSLLTSGGLFLFTHGKNDGEIISTMWKESFYHSALGLEKVHKLLKQNGFDILSSIED 182

Query: 253 Y 253
           Y
Sbjct: 183 Y 183


>gi|116491192|ref|YP_810736.1| cyclopropane-fatty-acyl-phospholipid synthase [Oenococcus oeni
           PSU-1]
 gi|116091917|gb|ABJ57071.1| cyclopropane-fatty-acyl-phospholipid synthase [Oenococcus oeni
           PSU-1]
          Length = 395

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 29/153 (18%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L ++      R+LD+G+G G + +   KE    K +G+ +S +  E  K     N 
Sbjct: 153 VRHILYKLHPAAGGRLLDIGSGWGTLIITAAKEF-HLKTIGITLSEEQYEYTKKQIQDNN 211

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID-GLS 204
           + E+ +    D+    +  FD + S                V  F+      G  + GL 
Sbjct: 212 LQEQVEVRLMDYRDLKDEQFDYVTS----------------VGMFE----HVGKENLGLY 251

Query: 205 HYRTIADGVSRHLNKDGLCSV--EIGYNQKVDV 235
                   +   L  +G   +    G +Q V V
Sbjct: 252 F-----KKIKELLMPNGRALIHGITGQHQGVGV 279


>gi|291514980|emb|CBK64190.1| demethylmenaquinone methyltransferase [Alistipes shahii WAL 8301]
          Length = 238

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              RILD+ TGTG + +A+ +     + +GVD+S + L +A+      G+  R    + D
Sbjct: 52  KPGRILDVATGTGDLAIAMARRIRDVQVLGVDLSEQMLAVARRKIEARGLDGRIVLDRGD 111


>gi|291225917|ref|XP_002732945.1| PREDICTED: Methyltransferase-like protein 5-like [Saccoglossus
           kowalevskii]
          Length = 194

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             L     R    +   + DLG G G + +  L        +G DI   +LEI + N   
Sbjct: 35  CMLHTIHSRYGDIEDKLVADLGCGCGVLSIGCLMLDANL-CIGFDIDEDSLEICRRNCEE 93

Query: 144 NGVSERFDTLQSDWFSSVEGL-----FDVIVSNPPY 174
              +   D +Q D    V+       FD ++ NPP+
Sbjct: 94  FEFT-NMDMVQCDLSQLVDSKRWKDCFDTVIMNPPF 128


>gi|239930822|ref|ZP_04687775.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291439190|ref|ZP_06578580.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           ghanaensis ATCC 14672]
 gi|291342085|gb|EFE69041.1| cyclopropane-fatty-acyl-phospholipid synthase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 435

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 44  RSLKHESI--HRILGWRDFYNVRL---TLSSDTFEPRPETELLVDSALAFSLPRIEKR-- 96
           +     +I  H  +G  DFY + L    + S  + P P  +  ++ A    L  + ++  
Sbjct: 142 KRSDRRAISHHYDVGN-DFYELVLGPSMVYSCAYWPAPPPQGTLEGAQHDKLELVSRKLA 200

Query: 97  --DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
                R+LD+G G G++ L   +E      VG+ +S +    A+      G+++R +   
Sbjct: 201 LKPGQRLLDVGCGWGSMALHAAREH-GADVVGITLSQEQAAYARKRVAEEGLTDRVEIRV 259

Query: 155 SDWFSSVEGLFDVIVS 170
            D+    +G +D + S
Sbjct: 260 QDYRDVTDGPYDAVSS 275


>gi|238853444|ref|ZP_04643823.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 202-4]
 gi|238834016|gb|EEQ26274.1| RNA methyltransferase, RsmD family [Lactobacillus gasseri 202-4]
          Length = 182

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  ++LDL  G+GA+ +       +   V VDIS +A +I + N       +RF  L+  
Sbjct: 41  DGGQVLDLYAGSGALGIE-AVSRGYDSAVLVDISGQACQIIRKNVELTKEEDRFRVLKCS 99

Query: 157 ------WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRD 189
                   +  E  FD+I  +PPY +  I   +   +++
Sbjct: 100 DNRAIKILNEEEKKFDLIFLDPPYAKQKIAKIMTKLLKN 138


>gi|184152778|ref|YP_001841119.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri JCM 1112]
 gi|183224122|dbj|BAG24639.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri JCM 1112]
          Length = 391

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L +++ +    +LD+G G G + L   KE    K  GV +S +     K   
Sbjct: 151 VDKV-HHILKKLDPKPGKTLLDIGCGWGTLMLTAAKEY-GLKVTGVTLSEEQYRFVKERI 208

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G+ +  +    D+    +  +D I S   + E V  + LGL  +D    ++     D
Sbjct: 209 EKEGLQDVAEVKLVDYRELGDQKWDYITSVGMF-EHVGKENLGLYFKDIQGYLA----DD 263

Query: 202 GLSHYRTIADG--------VSRHLNKDGLC-SVE--IGY 229
           G++    I           +++++   G    +E  IG+
Sbjct: 264 GVALIHGITRQQGGAYNGWINKYIFPGGYVPGLEEMIGH 302


>gi|219848123|ref|YP_002462556.1| C-20 methyltransferase BchU [Chloroflexus aggregans DSM 9485]
 gi|219542382|gb|ACL24120.1| C-20 methyltransferase BchU [Chloroflexus aggregans DSM 9485]
          Length = 354

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 75  RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKAL 134
           R   +L V+  +     R    DV  ++D+G G G +  AL +  P  K   +++   AL
Sbjct: 167 RSNIQLFVELLVK----RARLADVQTLVDVGGGIGDIAAALCQAFPNLKVTLINL-PSAL 221

Query: 135 EIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIV 169
           ++ + N    G+S+R   +  D +       D ++
Sbjct: 222 DLVRENVAAKGLSDRITPVAIDMYRDPYPPGDAVL 256


>gi|5822841|dbj|BAA83992.1| mcyA [Microcystis aeruginosa]
          Length = 2787

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 85/258 (32%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNAIVRS-----LKHESIHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +   +         + I  I+GW  
Sbjct: 693 SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYSQTSADSQGIFNIVGWNS 752

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 753 SYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILFQVA--- 798

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G +IS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 799 PHCQCYWGTNISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 854

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 855 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL-------GD 887

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 888 VRNLQLMEAFHADVELYK 905


>gi|148543368|ref|YP_001270738.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri DSM 20016]
 gi|227364442|ref|ZP_03848532.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri MM2-3]
 gi|325683641|ref|ZP_08163157.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri MM4-1A]
 gi|148530402|gb|ABQ82401.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri DSM 20016]
 gi|227070535|gb|EEI08868.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri MM2-3]
 gi|324977991|gb|EGC14942.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           reuteri MM4-1A]
          Length = 403

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 18/159 (11%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           VD      L +++ +    +LD+G G G + L   KE    K  GV +S +     K   
Sbjct: 163 VDKV-HHILKKLDPKPGKTLLDIGCGWGTLMLTAAKEY-GLKVTGVTLSEEQYRFVKERI 220

Query: 142 VTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGID 201
              G+ +  +    D+    +  +D I S   + E V  + LGL  +D    ++     D
Sbjct: 221 EKEGLQDVAEVKLVDYRELGDQKWDYITSVGMF-EHVGKENLGLYFKDIQGYLA----DD 275

Query: 202 GLSHYRTIADG--------VSRHLNKDGLC-SVE--IGY 229
           G++    I           +++++   G    +E  IG+
Sbjct: 276 GVALIHGITRQQGGAYNGWINKYIFPGGYVPGLEEMIGH 314


>gi|327468938|gb|EGF14410.1| O-methyltransferase [Streptococcus sanguinis SK330]
          Length = 227

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK+N       ++   
Sbjct: 64  VESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKANFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVS 170
           L+    D   ++E  +D++  
Sbjct: 124 LEGDAVDLLETLEDSYDLVFM 144


>gi|296235982|ref|XP_002763131.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog isoform 2
           [Callithrix jacchus]
          Length = 459

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 17/133 (12%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGT 106
            E    I  + +  ++++ +S D F    +        L  ++  +   +   IL D+  
Sbjct: 256 GEP--YI--FEELLSLKIRISPDAFF---QINTAGAEMLYRTVGELAGVNSDTILLDICC 308

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD-TLQSDWFS 159
           GTG + L+L + +   + +G+++  +A+E A+  A  NG++       R +  L     S
Sbjct: 309 GTGVIGLSLAQHT--SQVLGIELVEQAVEDARWTAAYNGITNSEFHTGRAEKILPGLLKS 366

Query: 160 SVEGLFDVIVSNP 172
             +G   V V NP
Sbjct: 367 KEDGQSIVAVVNP 379


>gi|296235980|ref|XP_002763130.1| PREDICTED: tRNA (uracil-5-)-methyltransferase homolog isoform 1
           [Callithrix jacchus]
          Length = 504

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 17/133 (12%)

Query: 48  HESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRIL-DLGT 106
            E    I  + +  ++++ +S D F    +        L  ++  +   +   IL D+  
Sbjct: 301 GEP--YI--FEELLSLKIRISPDAFF---QINTAGAEMLYRTVGELAGVNSDTILLDICC 353

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE------RFD-TLQSDWFS 159
           GTG + L+L + +   + +G+++  +A+E A+  A  NG++       R +  L     S
Sbjct: 354 GTGVIGLSLAQHT--SQVLGIELVEQAVEDARWTAAYNGITNSEFHTGRAEKILPGLLKS 411

Query: 160 SVEGLFDVIVSNP 172
             +G   V V NP
Sbjct: 412 KEDGQSIVAVVNP 424


>gi|238920899|ref|YP_002934414.1| 23S rRNA 5-methyluridine methyltransferase [Edwardsiella ictaluri
           93-146]
 gi|259495630|sp|C5B8X6|RUMA_EDWI9 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|238870468|gb|ACR70179.1| 23S rRNA (uracil-5-)-methyltransferase RumA, putative [Edwardsiella
           ictaluri 93-146]
          Length = 438

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 28/192 (14%)

Query: 1   MQALRDSHSFLCR---VTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRS------LKHESI 51
           + ALR +   L     V   +   +++     L    R  L+    +           + 
Sbjct: 185 LSALR-ARRRLGHLELVLADNGPLMVLRHLDPLSLSDREALSAFARQRGLTLYLSDGGAP 243

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALA-----FSLPRIEKRDVVRILDLGT 106
            R+LG   +Y     +     +  P+  + V++A+       +L  ++ R   R+LDL  
Sbjct: 244 QRLLGEAPYY----QIDGSRLDFNPQDFIQVNAAVNAQMVGQALAWLDVRADERVLDLFC 299

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-- 164
           G G   L L + +   + VGV+     +  A++NA  NG+S   +    +    V     
Sbjct: 300 GMGNFTLPLARLA--LRVVGVEGVPGLVATAQNNARNNGLS-NVEFFHQNLEEDVTRQAW 356

Query: 165 ----FDVIVSNP 172
               FD I+ +P
Sbjct: 357 ASQGFDKILLDP 368


>gi|238019598|ref|ZP_04600024.1| hypothetical protein VEIDISOL_01467 [Veillonella dispar ATCC 17748]
 gi|237863796|gb|EEP65086.1| hypothetical protein VEIDISOL_01467 [Veillonella dispar ATCC 17748]
          Length = 241

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 21/194 (10%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +++   +D F    +   L+                   +DLGTGTG + L +      
Sbjct: 14  GLQIYQRTDMFRFSFDAIALIHFCQFNGRHSY--------VDLGTGTGVMPL-IGTSLGA 64

Query: 122 FKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD-----WFSSVEGLFDVIVSNPPYIE 176
               G+DI+   +E+A+ +   N   +    +  D     +    +   D ++ NPP+ +
Sbjct: 65  GHITGIDINKTLIELAQRSVAHNHKQDVVTMVCGDYRHMSYRDVQDKPIDGVIVNPPFYD 124

Query: 177 SVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVV 236
                    E    +  ++L      L     +   V   +   G   +    ++   V+
Sbjct: 125 CESGAKPTSE----ERAVALHDEHTTLED---VLKAVQSFIKCKGRLWMIYSASRLQYVL 177

Query: 237 RIFESRKLFLVNAF 250
              E          
Sbjct: 178 HELEIANFQAKRIR 191


>gi|212709677|ref|ZP_03317805.1| hypothetical protein PROVALCAL_00725 [Providencia alcalifaciens DSM
           30120]
 gi|212687488|gb|EEB47016.1| hypothetical protein PROVALCAL_00725 [Providencia alcalifaciens DSM
           30120]
          Length = 375

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 9/125 (7%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGA 110
             +L   +F  V L +   +F    +T  +V S L   +   ++  ++  + DL  G G 
Sbjct: 191 QHVL-RDEFNQVPLFIRPQSFF---QTNPIVASQLYQTAREWVKALNITSLWDLFCGVGG 246

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFS-SVEGLFDVI 168
             L    ++   K  G++IS  A+E A+ +A   G+    F  L S  F+ S + + D++
Sbjct: 247 FGLHCADKT--TKLTGIEISAPAIECARQSAQELGLQHVEFQALDSTNFATSRDDIPDLV 304

Query: 169 VSNPP 173
           + NPP
Sbjct: 305 LVNPP 309


>gi|291541322|emb|CBL14433.1| SAM-dependent methyltransferase [Roseburia intestinalis XB6B4]
          Length = 403

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  T  G   L     +      G+DIS  A++ A  NA  NG+ +      ++
Sbjct: 221 KGKKVLDCFTHMGTFALN-AGIAGAADVTGLDISEYAVQQANENARRNGLEDTVHFRCAN 279

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               +         +DV++ +PP                   + ++ G       YR I 
Sbjct: 280 VLDELPKLAQSGEQYDVVILDPPAFTKSRQAT----------KNAIKG-------YREIN 322

Query: 211 DGVSRHLNKDGLCS 224
               + +   G  +
Sbjct: 323 MKGLKLVKDGGYLA 336


>gi|291534480|emb|CBL07592.1| SAM-dependent methyltransferase [Roseburia intestinalis M50/1]
          Length = 415

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  T  G   L     +      G+DIS  A++ A  NA  NG+ +      ++
Sbjct: 233 KGKKVLDCFTHMGTFALN-AGIAGAADVTGLDISEYAVQQANENARRNGLEDTVHFRCAN 291

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               +         +DV++ +PP                   + ++ G       YR I 
Sbjct: 292 VLDELPKLAQSGEQYDVVILDPPAFTKSRQAT----------KNAIKG-------YREIN 334

Query: 211 DGVSRHLNKDGLCS 224
               + +   G  +
Sbjct: 335 MKGLKLVKDGGYLA 348


>gi|228987310|ref|ZP_04147431.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157701|ref|ZP_04285776.1| Biotin biosynthesis protein BioC [Bacillus cereus ATCC 4342]
 gi|228625658|gb|EEK82410.1| Biotin biosynthesis protein BioC [Bacillus cereus ATCC 4342]
 gi|228772539|gb|EEM20984.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 257

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 35/143 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R      +RIL+LG GTG V   L    P      +D +   +E+A  + N   
Sbjct: 21  LSTLNRRYSANSSIRILELGCGTGYVTEQLSNLFPKAHITAIDFAESMIEVAKTRKNVE- 79

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                       D     +E  +DVI+SN  +                            
Sbjct: 80  -----NVMFYCEDIERLRLEETYDVIISNATF--------------------------QW 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           L+  + +   +  HL+ DG+   
Sbjct: 109 LNDLKKVIRNLFHHLSIDGILLF 131


>gi|240145244|ref|ZP_04743845.1| methyltransferase [Roseburia intestinalis L1-82]
 gi|257202707|gb|EEV00992.1| methyltransferase [Roseburia intestinalis L1-82]
          Length = 403

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 24/134 (17%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
              ++LD  T  G   L     +      G+DIS  A++ A  NA  NG+ +      ++
Sbjct: 221 KGKKVLDCFTHMGTFALN-AGIAGAADVTGLDISEYAVQQANENARRNGLEDTVHFRCAN 279

Query: 157 WFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIA 210
               +         +DV++ +PP                   + ++ G       YR I 
Sbjct: 280 VLDELPKLAQSGEQYDVVILDPPAFTKSRQAT----------KNAIKG-------YREIN 322

Query: 211 DGVSRHLNKDGLCS 224
               + +   G  +
Sbjct: 323 MKGLKLVKDGGYLA 336


>gi|160894134|ref|ZP_02074912.1| hypothetical protein CLOL250_01688 [Clostridium sp. L2-50]
 gi|156864167|gb|EDO57598.1| hypothetical protein CLOL250_01688 [Clostridium sp. L2-50]
          Length = 463

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I    +   +   +S  +F  +  T+   +   + +           I DL +GTG + 
Sbjct: 273 YI--EEEVLGLHFQISPFSF-FQTNTKS-AERLYSKAREYAGDTKDKLIFDLYSGTGTIA 328

Query: 113 LALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVI 168
             L   SP   K +GV+I  +A+E A+ NA +NG+ +  + +  D      ++E   D+I
Sbjct: 329 QML---SPVASKVIGVEIVEEAVEAARENAKSNGL-DNCEFIAGDVLKVIDTIEEKPDLI 384

Query: 169 VSNPP 173
           + +PP
Sbjct: 385 ILDPP 389


>gi|254361815|ref|ZP_04977950.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261491598|ref|ZP_05988181.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261494958|ref|ZP_05991427.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|153093350|gb|EDN74346.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica PHL213]
 gi|261309367|gb|EEY10601.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261312724|gb|EEY13844.1| 3-demethylubiquinone-9 3-O-methyltransferase [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 237

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 33/154 (21%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
              LL    LA+ L +       ++LD+G G G +  A+ K+       G+D++ + LE+
Sbjct: 28  PIHLLNPLRLAYILEKSNGLFGKKVLDVGCGGGILSEAMAKQ--GAIVTGIDMTSQPLEV 85

Query: 137 AKSNAVTNGVSE-----RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFD 191
           AK +A  +G+         +   +   +  +  FDVI                +E+ +  
Sbjct: 86  AKQHAKESGLEIDYQQTTIENFLAKMTACNQEKFDVITC--------------MEMLEHV 131

Query: 192 PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           P        D LS    I       L  DG+   
Sbjct: 132 P--------DPLS----IIQSCKALLKPDGVLFF 153


>gi|124002924|ref|ZP_01687775.1| type I restriction-modification system, M subunit [Microscilla
           marina ATCC 23134]
 gi|123991574|gb|EAY30982.1| type I restriction-modification system, M subunit [Microscilla
           marina ATCC 23134]
          Length = 538

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 19/122 (15%)

Query: 72  FEPRPETELLVDSA-LAFSLPRI-EKRDVVRILDLGTGTGAVCLALLKESPFF-----KG 124
           + P+  + +L +   L    P   +K+ +  +LD   G+G++ L + K          K 
Sbjct: 207 YTPQQISGILSEIVTLDCQNPAAGKKKKLEHVLDFACGSGSLLLNVRKRMVQAGGSTGKI 266

Query: 125 VGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEG-----------LFDVIVSNP 172
            G + +     +A+ N + +G+ +  FD    D   +  G            FD IV+NP
Sbjct: 267 YGQEKNVTTYNLARMNMLLHGMKDTEFDIFHGDTLLNQWGVLNEMNPAKKPKFDAIVANP 326

Query: 173 PY 174
           P+
Sbjct: 327 PF 328


>gi|6572605|gb|AAF17317.1|AF139335_1 microcystin synthetase [Microcystis aeruginosa]
          Length = 440

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/258 (20%), Positives = 87/258 (33%), Gaps = 58/258 (22%)

Query: 7   SHSFLCRVTGLSSH-QVIVDPDS-VLDDRQRFFLTNA---IVRSLKHES--IHRILGWRD 59
           S + +  V G S   +++   +   L D Q     +    I R    +S  I  I+GW  
Sbjct: 8   SKTLIAYVVGQSQEGELLATSEKGQLFDEQIEQWQSLYNQIYRQTSADSQGIFNIVGWNS 67

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
            Y            P  +    +D  +   L +  K    ++L++G GTG +   +    
Sbjct: 68  SYTGEP-------IPVAQMREWLDDKVKVILAQKPK----KVLEIGCGTGLILFQVA--- 113

Query: 120 PFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVIVSNPPY 174
           P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I+ N   
Sbjct: 114 PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTIILN--- 169

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVD 234
                       V  + P I          +   + +G  + L   G   +        D
Sbjct: 170 -----------SVVQYFPHI---------DYLLRVLEGAIKVLTSGGCIFL-------GD 202

Query: 235 VVRI-FESRKLFLVNAFK 251
           V  +         V  +K
Sbjct: 203 VRNLQLMEAFHADVELYK 220


>gi|15613250|ref|NP_241553.1| RNA methyltransferase [Bacillus halodurans C-125]
 gi|50401684|sp|Q9KF10|Y687_BACHD RecName: Full=Uncharacterized RNA methyltransferase BH0687
 gi|10173301|dbj|BAB04406.1| RNA methyltransferase [Bacillus halodurans C-125]
          Length = 458

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +++  +S+ +F      +T++L D AL F+           ++D   G G + L L +++
Sbjct: 277 DIKFAISARSFYQVNPEQTKVLYDQALEFA----NLTGSETVIDAYCGIGTISLFLAQQA 332

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD------WFSSVEGLFDVIVSNPP 173
                 GV+I  +A+  AK NA  NG +        D      W+ +     DVIV +PP
Sbjct: 333 K--HVYGVEIVPEAISDAKRNARLNGFA-NVQFAVGDAEKVMPWWYAQGVRADVIVVDPP 389


>gi|12229857|sp|P96188|MTX1_XANCR RecName: Full=Modification methylase XamI; Short=M.XamI; AltName:
           Full=Adenine-specific methyltransferase XamI
 gi|1688235|gb|AAD13686.1| XamI DNA methyltransferase [Xanthomonas campestris pv.
           amaranthicola]
          Length = 527

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 10/115 (8%)

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
            + P P    +V S + +      +    RI+D G G+G   LA  +  P  + V V++ 
Sbjct: 76  VYTPAP----IVRSMMTWL---AAQGSPARIVDPGAGSGRFILAAGEAFPDAQLVAVEMD 128

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPPYIESVIVDC 182
             A  + ++N    G ++R   +  D+              + NPPY+    +  
Sbjct: 129 PLAALMLRANLSARGWTDRATVMVKDYREVKLPPCAGITAFIGNPPYVRHHDIGE 183


>gi|152978325|ref|YP_001343954.1| ribosomal protein L11 methyltransferase [Actinobacillus
           succinogenes 130Z]
 gi|171704236|sp|A6VM22|PRMA_ACTSZ RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|150840048|gb|ABR74019.1| ribosomal protein L11 methyltransferase [Actinobacillus
           succinogenes 130Z]
          Length = 293

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A LK       +G+DI  +A+  + SNA  NGV++R     SD 
Sbjct: 159 GKTVIDFGCGSGILAIAALKLGAK-NAIGIDIDPQAILASGSNAQANGVADRLQLFLSD- 216

Query: 158 FSSVEGLFDVIVSN 171
               +   DV+V+N
Sbjct: 217 RQPADLKADVVVAN 230


>gi|47568176|ref|ZP_00238880.1| biotin synthesis protein, putative [Bacillus cereus G9241]
 gi|47555166|gb|EAL13513.1| biotin synthesis protein, putative [Bacillus cereus G9241]
          Length = 269

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 47/143 (32%), Gaps = 35/143 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R      +RIL+LG GTG V   L    P      +D +   +E+A  + N   
Sbjct: 33  LSTLNRRYSANSSIRILELGCGTGYVTEQLSNLFPKAHITAIDFAESMIEVAKTRKNVE- 91

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                       D     +E  +DVI+SN  +                            
Sbjct: 92  -----NVMFYCEDIERLRLEETYDVIISNATF--------------------------QW 120

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           L+  + +   +  HL+ DG+   
Sbjct: 121 LNDLKKVIRNLFHHLSIDGILLF 143


>gi|321471308|gb|EFX82281.1| hypothetical protein DAPPUDRAFT_302582 [Daphnia pulex]
          Length = 463

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 15/120 (12%)

Query: 62  NVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           +    +S ++F         LL D+      P+     +  ++DL  GTG   L + + S
Sbjct: 273 DYEFRISPESFFQINTEAARLLYDTVALQLAPQ----RMSTVVDLCCGTGTQGLMVARHS 328

Query: 120 PFFKGVGVDISCKALEIAKSNAVTNGVSE------RFDTLQSDWFSSVEGLFDV-IVSNP 172
                +GV++S  A+E A+ NA  N +        R + L       +E   D+ ++ NP
Sbjct: 329 RG--VIGVELSRSAVEDARFNAAHNQIQNAEFIAGRAEKLFKHIMEQLEVSPDIAVIVNP 386


>gi|257468005|ref|ZP_05632101.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|317062291|ref|ZP_07926776.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
 gi|313687967|gb|EFS24802.1| methyltransferase [Fusobacterium ulcerans ATCC 49185]
          Length = 393

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 24/133 (18%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            + LD+ + +G   +A LKE+   K   +D    ALE+ + N   N  +  F T++ D F
Sbjct: 218 TKFLDVFSSSGGFSMAALKENCK-KVTAIDKEPHALELCRENYALNEFTGDFVTMEGDAF 276

Query: 159 SSVE------GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             ++        FDV+  +PP +     D                    G   +  + D 
Sbjct: 277 LLLKTLVGRGEKFDVVTLDPPSLIKRKADIHR-----------------GRDFFFDLCDD 319

Query: 213 VSRHLNKDGLCSV 225
             + LN  G+  V
Sbjct: 320 SFKLLNDGGILGV 332


>gi|261820074|ref|YP_003258180.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium wasabiae
           WPP163]
 gi|261604087|gb|ACX86573.1| rRNA (guanine-N(2)-)-methyltransferase [Pectobacterium wasabiae
           WPP163]
          Length = 379

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 61  YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP 120
           Y  R+   ++ +     +   +D    F +  + ++   +I+DLG G G + LA LK +P
Sbjct: 198 YGYRIQNHANVY-----SRNGLDIGARFFMQHLPEQIDGKIVDLGCGNGVIGLAALKANP 252

Query: 121 FFKGVGVDISCKALEIAKSNAVTNGVSE--RFDTLQSDWFSSVE-GLFDVIVSNPPY 174
                  D S  A+  ++ N   N   +  R   + ++    V+      ++ NPP+
Sbjct: 253 EATVGFFDESYMAVASSQMNVEVNCPQDIERCSFVVNNGLVRVKRDTLQAVLCNPPF 309


>gi|226306951|ref|YP_002766911.1| cyclopropane fatty acid synthase [Rhodococcus erythropolis PR4]
 gi|226186068|dbj|BAH34172.1| putative cyclopropane fatty acid synthase [Rhodococcus erythropolis
           PR4]
          Length = 443

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 16/138 (11%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     +++ +  +R+LD+G G G++ L   +       VGV +S + +E AK      G
Sbjct: 184 LDLICRKLDLKPGMRLLDVGCGWGSMALHAAQNY-GVDVVGVSLSNEQVEYAKGRVADAG 242

Query: 146 VSERFDTLQSDWFSSVEGLFDVI----------VSNPPYIESVIVDCLGLEVRDFDPRIS 195
           +++R +    D+    +G +D I          ++N P   + + D L  + R  +  I+
Sbjct: 243 LADRIEIRVQDYRDVDDGPYDAISSIGMSEHVGLANLPVYTAKLFDLLAPQGRLLNHAIA 302

Query: 196 -----LDGGIDGLSHYRT 208
                 D   DG S    
Sbjct: 303 AVKSLSDNVDDGRSFIDR 320


>gi|149204524|ref|ZP_01881490.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp.
           TM1035]
 gi|149142023|gb|EDM30072.1| Cyclopropane-fatty-acyl-phospholipid synthase [Roseovarius sp.
           TM1035]
          Length = 416

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 15/148 (10%)

Query: 36  FFLTNAIVRSLKHESI--------HRILGWRDFYNVRLTLSSDTFEPR-PETELLVDSAL 86
            +L   + R L H  I        H      + Y++ L           P     +D A 
Sbjct: 98  RWLDAFLSRRLHHNPISRSHANVAHHYDISTELYDLFLDADRQYSCAYFPIGTETLDEAQ 157

Query: 87  AFSLPRIEK----RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           AF    I      R  + +LD+G+G G + + L ++    +  G+ +S + +  A+  A 
Sbjct: 158 AFKKKHIAAKLLMRPGLEVLDIGSGWGGLAMELAQQH-EARVTGLSLSTEQIAAARERAQ 216

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G+ ++    + D+     GL+D +VS
Sbjct: 217 QTGLFDQVAFERRDYREE-HGLYDRVVS 243


>gi|115371881|ref|ZP_01459194.1| hypothetical protein STIAU_8393 [Stigmatella aurantiaca DW4/3-1]
 gi|115371116|gb|EAU70038.1| hypothetical protein STIAU_8393 [Stigmatella aurantiaca DW4/3-1]
          Length = 262

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
            F    +       +LD+G G G+  + L       +  G+DIS +++E+A   A   GV
Sbjct: 20  EFRFESLGDLSGQHVLDVGCGDGSNSILLASR--GARVTGIDISPRSIELATERAKLAGV 77

Query: 147 SERFDTLQS--DWFSSVEGLFDVIV 169
            +R     S  +  +  E  FDVI 
Sbjct: 78  QDRVVFHCSPLELATFPENTFDVIW 102


>gi|327473317|gb|EGF18737.1| O-methyltransferase [Streptococcus sanguinis SK408]
          Length = 227

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 37/154 (24%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +E     +IL++GT  G   L + + +P  +   +D + + +E+AK N       ++   
Sbjct: 64  LESLQPEKILEIGTAIGFSALLMAEHAPQAQITTIDRNPEMIELAKVNFAKYDSRQQITL 123

Query: 153 LQS---DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
           L+    D   +++  +D++     +++S     +                          
Sbjct: 124 LEGDAMDLLETLDDSYDLV-----FMDSAKSKYVV------------------------F 154

Query: 210 ADGVSRHLNKDGLCSVEIGYN--QKVDVVRIFES 241
              V + LN  GL  +    +  Q  DV + FE 
Sbjct: 155 LPQVLKRLNPGGLILI---DDVFQGGDVAKPFED 185


>gi|330790811|ref|XP_003283489.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
 gi|325086599|gb|EGC39986.1| hypothetical protein DICPUDRAFT_25940 [Dictyostelium purpureum]
          Length = 447

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 25/173 (14%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV-CLAL 115
           + +++ L  D   P    R      ++  L      I+  +VV+ +D+GTG   +  L  
Sbjct: 58  FGLKIELPEDYLCPTITLRSNYLYWLNEKLNDL--GIDVNNVVKGIDIGTGASCIFPLLG 115

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------------- 161
           +K    +  +G+DI   +L+ AK N   N +  +    +++    +              
Sbjct: 116 VKLFKNWSFLGLDIDDSSLKFAKKNIELNSLESKISLFKNENKEKILFNYFQANQGEEKN 175

Query: 162 EGLFDVIVSNPPYIESVIVDCLGLE--VRDFDPRISLDGGIDGLSHYRTIADG 212
           E +FD  + NPP+   +    +  +         +  +GG       + I + 
Sbjct: 176 EEVFDFCLCNPPFFNDLSETNINPKSTCTGSANELVTEGGE--FIFIKKIIEE 226


>gi|310639247|ref|YP_003944006.1| type I restriction-modification system methyltransferase subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308752823|gb|ADO43967.1| type I restriction-modification system methyltransferase subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 667

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 67/208 (32%), Gaps = 39/208 (18%)

Query: 1   MQALRDSHSF---LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW 57
           ++ + +++     L     +      + PD V +D+      N I R             
Sbjct: 126 IEKMNEANILYLVLKEFLKVD-----LHPDRVKNDQMGLVFENLIRR------------- 167

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVV-RILDLGTGTGAVCLALL 116
             F  +    + D F PR    L+VD     +   + K   V R+LD   GTG +     
Sbjct: 168 --FNELANETAGDHFTPREVIHLMVDLLFMDADDVLSKPGTVMRMLDPACGTGGMLAEAQ 225

Query: 117 KESPFFK------GVGVDISCKALEIAK-----SNAVTNGVSERFDTLQSDWFSSVEGL- 164
           +              G D + +A   A           NG  E      S      EG  
Sbjct: 226 RYMRDHHKEAKLYVYGQDYNKRAFATAASDMLMKQVDHNGGGENVQFGDSFTDDKFEGQT 285

Query: 165 FDVIVSNPPYIESVIVDCLGLE-VRDFD 191
           FD  ++NPP+   V       E VR  +
Sbjct: 286 FDYFIANPPF--GVDWKKQQKEIVRRHE 311


>gi|308501921|ref|XP_003113145.1| CRE-METT-10 protein [Caenorhabditis remanei]
 gi|308265446|gb|EFP09399.1| CRE-METT-10 protein [Caenorhabditis remanei]
          Length = 481

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 19/137 (13%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETEL----LVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            +DF  + + L +    PR   +L    L+D  L  +    E    V  +D+GTGT  + 
Sbjct: 61  KKDFR-LNVELPTGHLVPRVPQKLNYCLLIDDILKAN----EITKNVVGIDIGTGTSCIH 115

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ---------SDWFSSVEG 163
             +      +K V  D   K++++A  N   N +++    +           D  +S++ 
Sbjct: 116 ALIGARHFGWKFVATDGDEKSVQVAHDNVARNDMNDSICVVHVNPAVKTVLIDVINSMQD 175

Query: 164 L-FDVIVSNPPYIESVI 179
             F   + NPP+ E   
Sbjct: 176 SDFSFCMCNPPFFEKSE 192


>gi|238787407|ref|ZP_04631206.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia
           frederiksenii ATCC 33641]
 gi|238724669|gb|EEQ16310.1| cyclopropane-fatty-acyl-phospholipid synthase [Yersinia
           frederiksenii ATCC 33641]
          Length = 378

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 6/123 (4%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSL-PRIEKRDVVRILDLGTG 107
           H  LG   ++ F +  +  SS  +   P T      A    L  +++ +    +L++GTG
Sbjct: 112 HYDLGNSFYQQFLDSEMLYSSALYRETPMTLEQAQQAKMRRLCEQLDLQPEDHLLEIGTG 171

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            GA+     +E    +     IS +  + A+      G+ ER   L  D +  ++G +D 
Sbjct: 172 WGALAEFAAREY-GCRVTTTTISREQYDYAQQRIKQAGLGERVTLLFED-YRELKGQYDK 229

Query: 168 IVS 170
           +VS
Sbjct: 230 LVS 232


>gi|220907414|ref|YP_002482725.1| type 11 methyltransferase [Cyanothece sp. PCC 7425]
 gi|219864025|gb|ACL44364.1| Methyltransferase type 11 [Cyanothece sp. PCC 7425]
          Length = 444

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 28/135 (20%)

Query: 91  PRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-- 148
            ++   D   ILD G G+G   L L   +P    VG+D S  ++ +A+     + +    
Sbjct: 51  QKVVSTDGKLILDAGCGSGYKSLLLAAANPGAHIVGIDFSETSVNLARQRMQYHNLGNTS 110

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
            F  L  +   S+   FD I          ++  L  +V              GL+  R 
Sbjct: 111 EFHVLSIEELPSLGLQFDYINC------DEVLYLLPDQVA-------------GLAAMRA 151

Query: 209 IADGVSRHLNKDGLC 223
           +       L  +G+ 
Sbjct: 152 V-------LKPEGVI 159


>gi|147921607|ref|YP_684576.1| N6 adenine-specific DNA methyltransferase [uncultured methanogenic
           archaeon RC-I]
 gi|110619972|emb|CAJ35250.1| predicted N6 adenine-specific DNA methyltransferase [uncultured
           methanogenic archaeon RC-I]
          Length = 225

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 19/91 (20%)

Query: 101 ILDLGTGTGAVCLALLKESPFF------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           ++DLG GTG + +               K +G+D   +ALE+AK+NA + G     D + 
Sbjct: 50  VIDLGCGTGILAIGARLLKDDAGMDSTQKVIGIDSDIRALEVAKANAESLGTD--VDWVH 107

Query: 155 SDWFS-----------SVEGLFDVIVSNPPY 174
            D              +    FD +V NPP+
Sbjct: 108 CDVRDVNNIPEIAVVLNAGSRFDTVVMNPPF 138


>gi|318040241|ref|ZP_07972197.1| precorrin-6B methylase [Synechococcus sp. CB0101]
          Length = 204

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 28/138 (20%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L  +  R    + D+G GTGA+ L + +  P  +   ++   +A+E+ K NA   G +
Sbjct: 39  MLLAHLRPRPDSLVWDVGGGTGALALEIARLMPAGQVHTLERDPEAIELLKRNARRFGAT 98

Query: 148 ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYR 207
                   D    +  L       PP+ + V+++                         R
Sbjct: 99  -NLHIHAGDAPEGLTQL-------PPHPDRVLLEVGRP--------------------LR 130

Query: 208 TIADGVSRHLNKDGLCSV 225
            + D V   L   G   +
Sbjct: 131 QVLDLVWEALVPQGRLVI 148


>gi|300721813|ref|YP_003711091.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           nematophila ATCC 19061]
 gi|297628308|emb|CBJ88869.1| methylation of 50S ribosomal subunit protein L11 [Xenorhabdus
           nematophila ATCC 19061]
          Length = 293

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS-D 156
              ++D G G+G + +A LK       +G+DI  +A++ ++ NA  NGVS +     S D
Sbjct: 159 GKTVIDFGCGSGILAIAALKLGAK-HAIGIDIDPQAIQASRDNAERNGVSGQLTLYLSKD 217

Query: 157 WFSSVEGLFDVIVSN 171
             + +E   D++++N
Sbjct: 218 QPADLE--CDIVIAN 230


>gi|217032457|ref|ZP_03437950.1| hypothetical protein HPB128_175g18 [Helicobacter pylori B128]
 gi|216945865|gb|EEC24485.1| hypothetical protein HPB128_175g18 [Helicobacter pylori B128]
          Length = 358

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 27/137 (19%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
           K++   +L+   G G    + LK       VG++I     +I   NA           L 
Sbjct: 5   KQNQGSVLEPSAGNG----SFLKRLKKA--VGIEIDP---KICSKNA-----------LC 44

Query: 155 SDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGV 213
            D+F   +E  FD I+ NPPY++   +     E   +    SL      L  Y    +  
Sbjct: 45  MDFFDYPLENQFDTIIGNPPYVKHKDIAPSTKEKLHY----SLFDERSNL--YLFFIEKA 98

Query: 214 SRHLNKDGLCSVEIGYN 230
            +HL   G        +
Sbjct: 99  IKHLKPKGELIFITPRD 115


>gi|254829743|ref|ZP_05234398.1| O-methyltransferase family protein [Listeria monocytogenes 10403S]
          Length = 217

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  + A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYKQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            ++R   L +D     E     G FD I
Sbjct: 100 ANDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|153809749|ref|ZP_01962417.1| hypothetical protein RUMOBE_00130 [Ruminococcus obeum ATCC 29174]
 gi|149833927|gb|EDM89007.1| hypothetical protein RUMOBE_00130 [Ruminococcus obeum ATCC 29174]
          Length = 400

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 99  VRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF 158
            R+LD  T TG+  L         +  GVD S  A++ A  NA  NG+ ++   +  D F
Sbjct: 224 ARVLDCFTHTGSFALNAGIAGAK-EVTGVDASQLAVDQATENAKLNGLDDKVKFICEDVF 282

Query: 159 SSVEG------LFDVIVSNPP 173
             +         +DV++ +PP
Sbjct: 283 ELLPKLEEEGEKYDVVILDPP 303


>gi|301765296|ref|XP_002918068.1| PREDICTED: putative methyltransferase METT10D-like [Ailuropoda
           melanoleuca]
          Length = 561

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 56/182 (30%), Gaps = 26/182 (14%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + + + +  +   P    R      V+  +       +K  V R +D+GTG   +   L 
Sbjct: 64  FGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTVRRGIDIGTGASCIYPLLG 121

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLFDVI 168
                +  +  ++       AK N   N +S+            L        E ++D  
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 181

Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GVSRH 216
           + NPP+  +            R   P     GG      +G  L   + I      + + 
Sbjct: 182 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKR 241

Query: 217 LN 218
           L 
Sbjct: 242 LR 243


>gi|281342346|gb|EFB17930.1| hypothetical protein PANDA_006455 [Ailuropoda melanoleuca]
          Length = 560

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 56/182 (30%), Gaps = 26/182 (14%)

Query: 61  YNVRLTLSSDTFEP----RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + + + +  +   P    R      V+  +       +K  V R +D+GTG   +   L 
Sbjct: 64  FGLSIDIPLERLIPTVPLRLNYIHWVEDLIGH--QDSDKSTVRRGIDIGTGASCIYPLLG 121

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--------LQSDWFSSVEGLFDVI 168
                +  +  ++       AK N   N +S+            L        E ++D  
Sbjct: 122 TTLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 181

Query: 169 VSNPPYIES--VIVDCLGLEVRDFDPRISLDGG-----IDG--LSHYRTIAD---GVSRH 216
           + NPP+  +            R   P     GG      +G  L   + I      + + 
Sbjct: 182 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKR 241

Query: 217 LN 218
           L 
Sbjct: 242 LR 243


>gi|257452577|ref|ZP_05617876.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|257466436|ref|ZP_05630747.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917592|ref|ZP_07913832.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317059117|ref|ZP_07923602.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313684793|gb|EFS21628.1| methyltransferase [Fusobacterium sp. 3_1_5R]
 gi|313691467|gb|EFS28302.1| methyltransferase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 182

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 44/205 (21%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G     + +L      FE RP    + ++  +   P +E       LDL +G+G + L
Sbjct: 4   IAGEA--RSRKLKTRKG-FETRPTLANVKEALFSMIAPHLEDS---VFLDLFSGSGNIAL 57

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDV 167
             L      + V ++   +AL     N    G  +R    ++D F ++E        F +
Sbjct: 58  EALSRGAK-RAVMIEKDTEALRFIIENVNALGFQDRCRAYKNDVFRAIEILARKGEKFSI 116

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           I  +PPY ++V                        L H           L ++G+   E 
Sbjct: 117 IFMDPPYQDNVCTKV--------------------LEHIEKF-----EILGEEGIIICEH 151

Query: 228 GYNQKVDVVRIFESRK-LFLVNAFK 251
                     + E       ++  K
Sbjct: 152 H-----AFEEMAERVGSFQKIDERK 171


>gi|119480169|ref|XP_001260113.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
 gi|119408267|gb|EAW18216.1| TAM domain methyltransferase, putative [Neosartorya fischeri NRRL
           181]
          Length = 321

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 39/150 (26%), Gaps = 41/150 (27%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
              ++       L         RILD+GTG+G   + +    P  +  G D+S       
Sbjct: 52  QHHMIKLVNDGRLFFAPIHSPKRILDIGTGSGIWPIEMASIFPEAEITGTDLSP------ 105

Query: 138 KSNAVTNGVSERFDTL-----QSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
                 N V      L     + DW    +  FD I              +      F  
Sbjct: 106 ---VQPNEVPNNVHFLVDDATEEDWLWDADH-FDFI----------HTAHMIGSFPSF-- 149

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGL 222
                         + +     +HL   G 
Sbjct: 150 --------------KDVLRKAFKHLKPGGY 165


>gi|118593446|ref|ZP_01550826.1| methyltransferase [Stappia aggregata IAM 12614]
 gi|118433925|gb|EAV40583.1| methyltransferase [Stappia aggregata IAM 12614]
          Length = 269

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 24/178 (13%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA---VTN 144
           +    +       ++DLG G G          P  K   VDI    L +A+         
Sbjct: 43  YLAAALPDGTRGHVVDLGAGVGTAGFCAAARLPEIKVTLVDIDETVLALARRGLEDPANR 102

Query: 145 GVSERFDTLQSDWFSS---------VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS 195
             S+R   L++D  +             L D  + NPPY E+          R       
Sbjct: 103 AFSDRVSLLEADITAKGSVRHAAGLTPALADHAIMNPPYYEADRFRASPNSAR------- 155

Query: 196 LDGGIDGLSH--YRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFK 251
              G   L        A   +  + + G  +V    +   +++ + + R    +    
Sbjct: 156 --AGAHMLDDRGLEPWAKTATDIVKEGGSLTVIFRADGLQELLSVLKGR-FGAIEVIP 210


>gi|119944761|ref|YP_942441.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychromonas
           ingrahamii 37]
 gi|119863365|gb|ABM02842.1| cyclopropane-fatty-acyl-phospholipid synthase [Psychromonas
           ingrahamii 37]
          Length = 413

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 36/181 (19%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA----LAFSLPRIEKRDVVRILDL 104
           H  LG   +  F +  +  SS  + P  +  L  + A    L     R+  +    +L++
Sbjct: 143 HYDLGNDLYEQFLDKEMLYSSAIY-PTSDASL--EEAQLHKLKTICDRLALKKGETLLEI 199

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
           GTG GA+ +   +     K     IS +     ++   + G+      L+SD +  + G 
Sbjct: 200 GTGWGALAIYAAQHY-GVKVTTTTISEEQFLYTQARVKSLGLEGSITLLKSD-YRDLTGQ 257

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           +D +VS              +E    +   S             I +    HL   G   
Sbjct: 258 YDKLVS-----------IEMIEAVGHEYLASFF----------EICNN---HLKPHGKML 293

Query: 225 V 225
           +
Sbjct: 294 I 294


>gi|28211569|ref|NP_782513.1| tRNA (uracil-5-) -methyltransferase [Clostridium tetani E88]
 gi|50401760|sp|Q892Z2|Y1941_CLOTE RecName: Full=Uncharacterized RNA methyltransferase CTC_01941
 gi|28204010|gb|AAO36450.1| tRNA (uracil-5-) -methyltransferase [Clostridium tetani E88]
          Length = 456

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 53  RILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVC 112
            I+   D   ++  ++  +F          +   +     I +     + DL  GTG + 
Sbjct: 269 YII--EDLLGLKFKITPLSFFQTNSKG--AEKLYSIVRDFIGESKSKTVFDLYCGTGTIG 324

Query: 113 LALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIV 169
             +  E+   K +G+++  +A+E A+ NA  N +    + +  D       V+   DVI+
Sbjct: 325 QIVAPEAK--KVIGIELIEEAVESARENAKLNNL-NNCEFIAGDIAQVIKEVKQKPDVII 381

Query: 170 SNPP 173
            +PP
Sbjct: 382 LDPP 385


>gi|255029280|ref|ZP_05301231.1| hypothetical protein LmonL_09428 [Listeria monocytogenes LO28]
          Length = 171

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   +  E A  N    G
Sbjct: 3   LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYG 62

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 63  ASDRVKVLLTDAIEGAEEILAHGPFDAI 90


>gi|229075823|ref|ZP_04208800.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-18]
 gi|228707375|gb|EEL59571.1| Biotin biosynthesis protein BioC [Bacillus cereus Rock4-18]
          Length = 257

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 35/143 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R      +RIL+LG GTG V   L    P      +D +   + +A  + N   
Sbjct: 21  LSTLNRRYSANSSIRILELGCGTGYVTEKLSNLFPKAHITAIDFAESMIAVAKTRQNVK- 79

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                       D     +E  +DVI+SN  +                            
Sbjct: 80  -----NVTFHCEDIERLRLEESYDVIISNATF--------------------------QW 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           L+  + +   +  HL+ DG+   
Sbjct: 109 LNDLKQVIRNLFHHLSTDGILLF 131


>gi|222153442|ref|YP_002562619.1| methylase [Streptococcus uberis 0140J]
 gi|222114255|emb|CAR42864.1| putative methylase [Streptococcus uberis 0140J]
          Length = 179

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           D  R+LDL  G+GA+ +         + V V+    A  + + N       ++F  L+ D
Sbjct: 41  DGGRVLDLFAGSGALSIE-AISRGMSEAVLVERDRGAQAVIQENIKMTKAEKQFKLLKMD 99

Query: 157 ---WFSSVEGLFDVIVSNPPYIESVIVDCLG 184
                S +   FD+I  +PPY +  IV  + 
Sbjct: 100 AKKALSQLHQPFDLIFLDPPYAKEEIVATIE 130


>gi|156934644|ref|YP_001438560.1| 23S rRNA methyluridine methyltransferase [Cronobacter sakazakii
           ATCC BAA-894]
 gi|167012640|sp|A7MF48|RUMB_ENTS8 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|156532898|gb|ABU77724.1| hypothetical protein ESA_02478 [Cronobacter sakazakii ATCC BAA-894]
          Length = 375

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  V L +   +F     T   V SAL A +   +    V  + DL  G G   L     
Sbjct: 198 FNGVPLWIRPQSFFQTNPT---VASALYATARDWVRALPVNHMWDLFCGVGGFGLHCA-- 252

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQS-DWFSSVEGLFDVIVSNPP 173
           +P     G++I+ +A+  A+++A   G+ +  F  L S D+ +  + + D+++ NPP
Sbjct: 253 TPEMTLTGIEIAPEAIASARASAQALGLRNVHFQALDSTDFATGQQAVPDLVLVNPP 309


>gi|146308558|ref|YP_001189023.1| ribosomal protein L11 methylase-like protein [Pseudomonas mendocina
           ymp]
 gi|145576759|gb|ABP86291.1| Ribosomal protein L11 methylase-like protein [Pseudomonas mendocina
           ymp]
          Length = 265

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
           + P PE        +A  L   E      ++DLG+G G + ++ +++       G+D+  
Sbjct: 38  YVPTPEP------VVAHMLELAEIGPDDYVIDLGSGDGRIAISAVQDHGARAAYGIDLDP 91

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI 168
           + +  A+ NA   GV++R    Q D F       DV+
Sbjct: 92  ERVSEARENAEREGVADRVTFEQGDLFEKDISQADVL 128


>gi|83594198|ref|YP_427950.1| 50S ribosomal protein L11P methyltransferase [Rhodospirillum rubrum
           ATCC 11170]
 gi|83577112|gb|ABC23663.1| LSU ribosomal protein L11P methyltransferase [Rhodospirillum rubrum
           ATCC 11170]
          Length = 297

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           ++     ILD+G G+G + LA  +         VDI  +++ +A+ NA  NG++      
Sbjct: 154 KRHRYRNILDMGCGSGILSLAAARAFARP-VRAVDIDVESVRVARFNAHLNGLAAFIRAE 212

Query: 154 QSDWFSSVE----GLFDVIVSN 171
             +          G +D+I++N
Sbjct: 213 HGNGARGRTVIEGGPYDLILAN 234


>gi|54297523|ref|YP_123892.1| hypothetical protein lpp1571 [Legionella pneumophila str. Paris]
 gi|148359140|ref|YP_001250347.1| hypothetical protein LPC_1032 [Legionella pneumophila str. Corby]
 gi|53751308|emb|CAH12722.1| hypothetical protein lpp1571 [Legionella pneumophila str. Paris]
 gi|148280913|gb|ABQ55001.1| hypothetical protein LPC_1032 [Legionella pneumophila str. Corby]
          Length = 226

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 69  SDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGV 127
            D +    ++  L     A  L        +R+LDL  G G + + L        +   +
Sbjct: 27  PDDYRFSLDSIHLAKFV-AKQLESYPDLGSLRVLDLCAGCGVIGIELSWYLQAIRQIDFI 85

Query: 128 DISCKALEIAKSNAV---TNGVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESV 178
           +I     E    N        +  R+  L  D       E  FD+I+SNPPY +  
Sbjct: 86  EIQDIYTEYFYQNIANVNRPELQFRWHLLNYDELHKKKWEDKFDLIISNPPYFQPG 141


>gi|91978794|ref|YP_571453.1| cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris BisB5]
 gi|91685250|gb|ABE41552.1| Cyclopropane-fatty-acyl-phospholipid synthase [Rhodopseudomonas
           palustris BisB5]
          Length = 341

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 38/151 (25%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN-- 140
           + AL  ++   + RD   +L+LG G G++ LA+ ++ P+ + V V  S       + N  
Sbjct: 102 EDALRLTMEHADLRDGQSVLELGCGWGSLSLAMARQFPYSRIVAVSNSAS-----QRNYI 156

Query: 141 ----AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                + +  + R  T   + F      FD IVS                V  F+  ++ 
Sbjct: 157 EAQAILRDLPNLRVVTSDMNVFEP-HARFDRIVS----------------VEMFEHMMNW 199

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                     R +   +   L   GL  + I
Sbjct: 200 ----------RKLLTWIHGWLAPGGLFFMHI 220


>gi|321469933|gb|EFX80911.1| hypothetical protein DAPPUDRAFT_50570 [Daphnia pulex]
          Length = 449

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 17/164 (10%)

Query: 25  DPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEP----RPETEL 80
                L  +      +A         +  +L  RDF N+ + L  D   P    R    L
Sbjct: 26  HAKQKLTGKIEIDFKDAAAVRA----LSTVLLKRDF-NLDVELPPDRLVPTLPLRLNYLL 80

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
            V+  L    P  E+  +V  +D+GTG   +   L      +     +      + +   
Sbjct: 81  WVEDLLQLVNPASEQ--IVHGIDIGTGACCIYPILAARMKGWHFTATEADETNYKCSLET 138

Query: 141 AVTNGVSERFDTLQSDWFSSVEG------LFDVIVSNPPYIESV 178
              N +      ++    S + G       +D  + NPP+ +S 
Sbjct: 139 LEHNSLQSHITIVKVTAESMLHGNIDTNRKYDFTMCNPPFFDSD 182


>gi|228916756|ref|ZP_04080321.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228842943|gb|EEM88026.1| Biotin biosynthesis protein BioC [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 257

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 46/143 (32%), Gaps = 35/143 (24%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA--KSNAVT 143
           L+    R      +RIL+LG GTG V   L    P      +D +   + +A  + N   
Sbjct: 21  LSTLDQRYSANSSIRILELGCGTGYVTEQLSNLFPKAHITAIDFAESMIAVAKTRQNVK- 79

Query: 144 NGVSERFDTLQSDWFS-SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
                       D     +E  +DVI+SN  +                            
Sbjct: 80  -----NVMFYCEDIERLQLEETYDVIISNATF--------------------------QW 108

Query: 203 LSHYRTIADGVSRHLNKDGLCSV 225
           L+  + +   +  HL+ DG+   
Sbjct: 109 LNDLKQVIRNLFHHLSIDGILLF 131


>gi|269213887|ref|ZP_06158240.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC
           14685]
 gi|269145275|gb|EEZ71693.1| ribosomal protein L11 methyltransferase [Neisseria cinerea ATCC
           14685]
          Length = 139

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           ++   +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F     
Sbjct: 6   KNGESVLDYGCGSGILTIASLKLGAGS-AVGVDIDEQAIRASKDNAEQNNVDAQFFLPDG 64

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FDV+V+N
Sbjct: 65  L----PQGQFDVVVAN 76


>gi|213585212|ref|ZP_03367038.1| cobalt-precorrin-6Y C(15)-methyltransferase [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 104

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           ++D+G GTG+V +    + P  +   ++ +  AL +   N          D L  +   +
Sbjct: 1   MIDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACG-NIDILPGEAPMT 59

Query: 161 VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
           + G  D +                             GG  G  H   + D    HL+  
Sbjct: 60  ITGKADAVFM---------------------------GGSGG--HLTALIDWAMGHLHPG 90

Query: 221 GLCSV 225
           G   +
Sbjct: 91  GRLVM 95


>gi|218441230|ref|YP_002379559.1| methyltransferase type 11 [Cyanothece sp. PCC 7424]
 gi|218173958|gb|ACK72691.1| Methyltransferase type 11 [Cyanothece sp. PCC 7424]
          Length = 286

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 87/237 (36%), Gaps = 56/237 (23%)

Query: 29  VLDDRQRFFLTNAIV--------RSLKHESIHRILGWRDFYNVR---LTLSSDT-FEPR- 75
           ++++ +   L NAI         R+ +    H  L  ++F+ ++   LT+ +   ++P  
Sbjct: 19  LINEEELKHLKNAINWQQETENFRNPEIVYPHYYL-SQNFHGIKGGYLTIEAAVTYDPVT 77

Query: 76  ----PETELLVD-SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
               P  E  V   A+AF           RILDLG GTG+  L L +     + +G+D+S
Sbjct: 78  RYVFPPNETWVRREAIAFI-----GGQPRRILDLGCGTGSTTLLLKQTFVDGEIIGIDLS 132

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
              L +A   A   G+S      Q    ++++  F               D +   +   
Sbjct: 133 PYMLAMANYKAKQAGLSV-----QWQQGNALKTHF----------PDASFDVVTASLLFH 177

Query: 191 D--PRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN----QKVDVVRIFES 241
           +  P ++            +I     R L   G   +  G      Q   ++ IFE 
Sbjct: 178 ETPPMVA-----------ESILKECFRLLIPGGQVIIFDGNQKILRQTPWLMEIFEE 223


>gi|157372545|ref|YP_001480534.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans
           568]
 gi|229470398|sp|A8GJW6|RLMG_SERP5 RecName: Full=Ribosomal RNA large subunit methyltransferase G;
           AltName: Full=23S rRNA m2G1835 methyltransferase;
           AltName: Full=rRNA (guanine-N(2)-)-methyltransferase
           rlmG
 gi|157324309|gb|ABV43406.1| rRNA (guanine-N(2)-)-methyltransferase [Serratia proteamaculans
           568]
          Length = 379

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 3/94 (3%)

Query: 90  LPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN--GVS 147
           L  +       I+DLG G G + +A L ++P  +   VD S  A+  ++ N   N     
Sbjct: 222 LDHLPHDIEGHIIDLGCGNGVIGMAALMQNPQAQVSFVDESYMAVASSELNVEHNLPQDM 281

Query: 148 ERFDTLQSDWFSSVE-GLFDVIVSNPPYIESVIV 180
           +R     ++  + +E      ++ NPP+ +   +
Sbjct: 282 DRCQFEVNNSLAGIERESVQAVLCNPPFHQQHAI 315


>gi|261364176|ref|ZP_05977059.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC
           25996]
 gi|288567782|gb|EFC89342.1| ribosomal protein L11 methyltransferase [Neisseria mucosa ATCC
           25996]
          Length = 295

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +    +LD G G+G + +A LK       VGVDI  +A+  +K NA  N V  +F     
Sbjct: 162 KGGESVLDYGCGSGILTIAALKLGAGS-AVGVDIDEQAIRASKDNAAQNNVDAQFYLPDG 220

Query: 156 DWFSSVEGLFDVIVSN 171
                 +G FD++V+N
Sbjct: 221 L----PQGQFDIVVAN 232


>gi|161522856|ref|YP_001585785.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|189348308|ref|YP_001941504.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|160346409|gb|ABX19493.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
 gi|189338446|dbj|BAG47514.1| cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           multivorans ATCC 17616]
          Length = 405

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           R  +R+L++G G G   +   ++       GV IS     +A+     +G+S+R      
Sbjct: 188 RAGMRVLEIGCGWGGFAVHAARQ--GIHVHGVTISHAQYALAQERVARDGLSDRVTFDLR 245

Query: 156 DWFSSVEGLFDVIVS 170
           D +  VEG +D IVS
Sbjct: 246 D-YRDVEGQYDAIVS 259


>gi|46445882|ref|YP_007247.1| putative RNA methyl transferase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|51316633|sp|Q6MEM7|Y248_PARUW RecName: Full=Uncharacterized RNA methyltransferase pc0248
 gi|46399523|emb|CAF22972.1| putative RNA methyl transferase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 434

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 64/174 (36%), Gaps = 24/174 (13%)

Query: 18  SSHQVIVDPDSVLDDRQRFFLTNAIVR-------SLKHESIHRILG----WRDFYNVRLT 66
           +S  ++      L++  R     A+ +        +       I+G     +   N+   
Sbjct: 199 NSQYILSFQFCSLNELNRILFQEALEKYPIFSGILVTSPKKQWIIGNPYSEQKIENLIFR 258

Query: 67  LSSDTFE-PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            +   F    PE  L +   +     +++ +   +ILDL  G G   L L  +  F    
Sbjct: 259 FTPQAFIQNHPEQSLYIYKKICSLTIQLKSK---KILDLYCGFGITSLLLASQGHF--VT 313

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
           G++ +  A+  AK N+  N +    + L+ D    +          D+++ NPP
Sbjct: 314 GIEYNSDAIRFAKENSKLNHLPH-VEFLEGDVEKILPICLKSQKCVDLVIVNPP 366


>gi|86133209|ref|ZP_01051791.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152]
 gi|85820072|gb|EAQ41219.1| RNA methyltransferase, TrmA family [Polaribacter sp. MED152]
          Length = 483

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 59  DFYNVRLTLS-SDTFEPRPETEL-LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           +   +   +S    F+  P++   L    + + L    K D   ++DL  GTG +   + 
Sbjct: 295 ELLGLNFEISMKSFFQTNPKSAEKLYSKVVDYVLEDKSKVDNTVVMDLFCGTGTIGQIVA 354

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
            +S   K VGVDI   A+E AK NA  N + 
Sbjct: 355 SKSENAKIVGVDIVASAIEDAKENAKRNNIE 385


>gi|311029870|ref|ZP_07707960.1| hypothetical protein Bm3-1_04819 [Bacillus sp. m3-13]
          Length = 330

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 39/190 (20%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
           + LL   A+   +  ++K     ++D+G G+G   L L ++ P  + +G++++    E A
Sbjct: 141 SSLLEQLAIPRVMKVMKKAKPKTVIDVGCGSGGYLLKLSQKFPKAQMLGIELNEDVAEEA 200

Query: 138 KSNAVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
             N       ++ + +  D    S E   D ++ N       I+  +    R        
Sbjct: 201 SKNCQK---QKQVEIICEDVHKWSPEDKVDFVMLN------NILHYISPNDRT------- 244

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV---EIGYNQKVDVVRIFES--------RKLF 245
                       +   +S  L   G  SV               +F S          L 
Sbjct: 245 -----------ELFKKISEWLPPKGTLSVVSPIHNSKHGGQFSSVFNSFFTAFDNLYPLP 293

Query: 246 LVNAFKDYGG 255
             +  KD   
Sbjct: 294 SEDDLKDLAN 303


>gi|313113368|ref|ZP_07798959.1| methyltransferase domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624295|gb|EFQ07659.1| methyltransferase domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 213

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 54/187 (28%), Gaps = 43/187 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +   + L  ++      +LD G G GA    LLK  P  +  G+D S  ++E A+     
Sbjct: 38  AMAEWGLSFLQPAPDAMVLDCGCGGGANIKTLLKLCPKGRVQGIDYSAVSVEKARKVNAR 97

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              + R    Q+             V+  P+           E   F P ++ +      
Sbjct: 98  AIAAGRCTVQQAS------------VAELPFEAEQFDVVTAFETVYFWPELAQN------ 139

Query: 204 SHYRTIADGVSRHLNKDGLCSV--EIG--------YNQ---------KVDVVRIFESRKL 244
                    V R L   G+  +  E          + Q            +    E    
Sbjct: 140 ------FREVYRVLKPGGIFFICNEANGETTKDDKWTQIIDGMTIYTDTALKAYLEQAGF 193

Query: 245 FLVNAFK 251
             + + K
Sbjct: 194 CQIQSHK 200


>gi|156379240|ref|XP_001631366.1| predicted protein [Nematostella vectensis]
 gi|156218405|gb|EDO39303.1| predicted protein [Nematostella vectensis]
          Length = 213

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 20/159 (12%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           I+D   G G   +         + + +DI    ++ A+ NA   GV++R + +  D+   
Sbjct: 56  IVDAFCGVGGNAIQFA--FTCERVIAIDIDPVKIDCARHNAEIYGVADRIEFVLGDFRQI 113

Query: 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY---RTIADGVSRH 216
           V     DVI  +PP+           +V D    ISL    DG   Y   + +   ++  
Sbjct: 114 VPQLKADVIFLSPPWGGPGYAC---ADVFDIQTMISL----DGFELYETAKRVTPNIAYF 166

Query: 217 LNKDGLCSVE-----IGYNQKVDVVRIFESRKLFLVNAF 250
           + ++   ++E      G   KV++ + F ++KL  V A+
Sbjct: 167 MPRN--VNMEQLTSLAGPAGKVEIEQNFVNKKLKTVTAY 203


>gi|119480209|ref|XP_001260133.1| hypothetical protein NFIA_081820 [Neosartorya fischeri NRRL 181]
 gi|119408287|gb|EAW18236.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 258

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 41/195 (21%)

Query: 71  TFEPRPETELLVDSALAFSLPRI------EKRDVVRILDLGTGTGAVCLALLKESPFFKG 124
            +EP  ++ L +D+  + S  +              ++++GTG+G V   +   S    G
Sbjct: 15  IYEPSEDSYLFLDTLSSISESQWLSERFNSTSTTPLVVEVGTGSGVVLAFVAANSHEIFG 74

Query: 125 ------VGVDISCKALEIAKSN-------AVTNGVSERFDTLQSDWFSSV-EGLFDVIVS 170
                 +G D++  A  +A          A     S    ++  D  S +  G  DV++ 
Sbjct: 75  RRDILTLGTDVNRNAC-VATRTTVKTAIQAAAALKSTHVASVLGDLCSPLRPGSVDVLLF 133

Query: 171 NPPYIESVIVDCLG----LEV-RDFDPR--------------ISLDGGIDGLSHYRTIAD 211
           NPPY+ +  +  L      E     +P               ++  GG+DG+     + +
Sbjct: 134 NPPYVPTEELPRLPLVTEQEADPAAEPLSRSAKFERDSYYLSLTYAGGMDGMETTNRLLE 193

Query: 212 GVSRHLNKD-GLCSV 225
            V   L+ + G+  V
Sbjct: 194 AVPGVLHPERGVAYV 208


>gi|189424829|ref|YP_001952006.1| methyltransferase [Geobacter lovleyi SZ]
 gi|189421088|gb|ACD95486.1| methyltransferase [Geobacter lovleyi SZ]
          Length = 189

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 7/99 (7%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V  AL   L    + D +R+LDL  G+G++ +  L      +   ++    ALE  + N 
Sbjct: 28  VKEALFSLLDSAGRLDGMRVLDLFAGSGSLGIEALSRGAE-QVTFIEKDRHALESLRLNL 86

Query: 142 VTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPY 174
              G S+R + L  D   ++E L      FD+I+ +PPY
Sbjct: 87  GHTGFSDRAEVLPFDCLQALERLVRQKVCFDLILLDPPY 125


>gi|116628338|ref|YP_820957.1| methyltransferase, putative [Streptococcus thermophilus LMD-9]
 gi|116101615|gb|ABJ66761.1| N6-adenine-specific methylase [Streptococcus thermophilus LMD-9]
 gi|312278964|gb|ADQ63621.1| Methyltransferase, putative [Streptococcus thermophilus ND03]
          Length = 179

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF    L         RP T+ +  +      P     D  R+LDL +G+G++ +     
Sbjct: 7   DFGGRPLKTLEG-KTTRPTTDKVKGAIFNMIGPFF---DGGRVLDLFSGSGSLAIE-AIS 61

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175
                 V V+   +A  + + N       E+F  L+ D     + + G FD+++ +PPY 
Sbjct: 62  RGMSSAVLVEKDRRAQAVIQENIKMTKSEEQFQLLKMDAARALTQLTGQFDLVLLDPPYA 121

Query: 176 ESVIVDCLGL 185
           +  IV  +  
Sbjct: 122 KEQIVANITQ 131


>gi|55823553|ref|YP_141994.1| methyltransferase [Streptococcus thermophilus CNRZ1066]
 gi|55739538|gb|AAV63179.1| methyltransferase, putative [Streptococcus thermophilus CNRZ1066]
          Length = 199

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF    L         RP T+ +  +      P     D  R+LDL +G+G++ +     
Sbjct: 27  DFGGRPLKTLEG-KTTRPTTDKVKGAIFNMIGPFF---DGGRVLDLFSGSGSLAIE-AIS 81

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175
                 V V+   +A  + + N       E+F  L+ D     + + G FD+++ +PPY 
Sbjct: 82  RGMSSAVLVEKDRRAQAVIQENIKMTKSEEQFQLLKMDAARALTQLTGQFDLVLLDPPYA 141

Query: 176 ESVIVDCLGL 185
           +  IV  +  
Sbjct: 142 KEQIVANITQ 151


>gi|55821625|ref|YP_140067.1| methyltransferase [Streptococcus thermophilus LMG 18311]
 gi|55737610|gb|AAV61252.1| methyltransferase, putative [Streptococcus thermophilus LMG 18311]
          Length = 182

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 8/130 (6%)

Query: 59  DFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           DF    L         RP T+ +  +      P     D  R+LDL +G+G++ +     
Sbjct: 10  DFGGRPLKTLEG-KTTRPTTDKVKGAIFNMIGPFF---DGGRVLDLFSGSGSLAIE-AIS 64

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFSSVEGLFDVIVSNPPYI 175
                 V V+   +A  + + N       E+F  L+ D     + + G FD+++ +PPY 
Sbjct: 65  RGMSSAVLVEKDRRAQAVIQENIKMTKSEEQFQLLKMDAARALTQLTGQFDLVLLDPPYA 124

Query: 176 ESVIVDCLGL 185
           +  IV  +  
Sbjct: 125 KEQIVANITQ 134


>gi|319793633|ref|YP_004155273.1| cyclopropane-fatty-acyL-phospholipid synthase [Variovorax paradoxus
           EPS]
 gi|315596096|gb|ADU37162.1| Cyclopropane-fatty-acyl-phospholipid synthase [Variovorax paradoxus
           EPS]
          Length = 410

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I+ R    +LD+G G GA+ +   ++    + VGV +S    ++A       G
Sbjct: 159 IDHILTKIDLRPGQTLLDIGCGWGALVIRAAQKF-GARCVGVTLSQNQFDLATERVKAAG 217

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           + +R +    D +  V G FD I S
Sbjct: 218 LEDRIEIRLQD-YRDVTGQFDRITS 241


>gi|260549441|ref|ZP_05823660.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter sp.
           RUH2624]
 gi|260407550|gb|EEX01024.1| cyclopropane-fatty-acyl-phospholipid synthase [Acinetobacter sp.
           RUH2624]
          Length = 349

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 37/151 (24%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCK----ALEIAK 138
           + AL     R + ++   IL+LG G G++ L + +  P  +   V  S       L  AK
Sbjct: 107 ELALQLYCERAQLKNGQHILELGCGWGSLTLWMAENYPRSQITAVSNSATQKKHILGQAK 166

Query: 139 SNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
                       + L  D       +  FD +VS            +   VR+       
Sbjct: 167 -----LRGLSNIEVLTCDVNVLELDQARFDRVVSV----------EMFEHVRN------- 204

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
                    Y+ + + + + L  +GL    I
Sbjct: 205 ---------YQRLFEKIQQWLKPEGLLWCHI 226


>gi|257461070|ref|ZP_05626168.1| methyltransferase type 11 [Campylobacter gracilis RM3268]
 gi|257441444|gb|EEV16589.1| methyltransferase type 11 [Campylobacter gracilis RM3268]
          Length = 263

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 64/184 (34%), Gaps = 41/184 (22%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L  + +  +   ++  +  R LD+G G+GA+ +A+ K +P    +GVD      E A  N
Sbjct: 79  LSRAIVEGTAKYVDLPEGGRGLDVGCGSGALTIAVAKRNPHASVLGVDR--WGFEYASFN 136

Query: 141 AVTNGVSERFDTLQSDWFSSV--------EGLFDVIVSNPPYIESVIVDCLGLEVRDFDP 192
                 + R + +Q+  F           +G FD + SN  Y   +  D           
Sbjct: 137 KQLCESNARAEGVQNTSFEQADATQLPFEDGSFDAVASNYVYHNIMRKD----------- 185

Query: 193 RISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI------GYNQKVDVVRIFESRKLFL 246
           R +L            + + + R L K G  ++         Y      +   + +    
Sbjct: 186 RQAL------------LLETL-RVLKKGGSFAI-HDLFSRGNYGDMDAFIAHLKEQGYER 231

Query: 247 VNAF 250
           V   
Sbjct: 232 VELI 235


>gi|29653699|ref|NP_819391.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
           493]
 gi|161829915|ref|YP_001596294.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii RSA
           331]
 gi|212213149|ref|YP_002304085.1| 3-demethylubiquinone-9 3-methyltransferase [Coxiella burnetii
           CbuG_Q212]
 gi|39932522|sp|Q820B5|UBIG_COXBU RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|189037619|sp|A9NBI0|UBIG_COXBR RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|226725539|sp|B6J1W2|UBIG_COXB2 RecName: Full=3-demethylubiquinone-9 3-methyltransferase; AltName:
           Full=3,4-dihydroxy-5-hexaprenylbenzoate
           methyltransferase; Short=DHHB methyltransferase
 gi|29540962|gb|AAO89905.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii RSA
           493]
 gi|161761782|gb|ABX77424.1| 3-demethylubiquinone-9 3-O-methyltransferase [Coxiella burnetii RSA
           331]
 gi|212011559|gb|ACJ18940.1| 3-demethylubiquinone 3-methyltransferase [Coxiella burnetii
           CbuG_Q212]
          Length = 234

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 28/145 (19%)

Query: 81  LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSN 140
           L++      + +        +LD+G G G +  AL K        GVD+S   +++AK++
Sbjct: 35  LINPVRLKYIEQQITLKGKHVLDVGCGGGLLSEALAKH--GAIVTGVDMSESLIDVAKNH 92

Query: 141 AVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGI 200
           A    ++  +     +  +     FD+I                +E+ +  P        
Sbjct: 93  AEQQQLNINYQCQDIEILTKDAQRFDIITC--------------MELLEHVP-------- 130

Query: 201 DGLSHYRTIADGVSRHLNKDGLCSV 225
                 + +    +  +   G    
Sbjct: 131 ----DPQRMIKNCAALIKPGGKLFF 151


>gi|307352499|ref|YP_003893550.1| ribosomal L11 methyltransferase [Methanoplanus petrolearius DSM
           11571]
 gi|307155732|gb|ADN35112.1| ribosomal L11 methyltransferase [Methanoplanus petrolearius DSM
           11571]
          Length = 199

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 97  DVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD 156
           +   +LDLG GTG             +  G DI   A+  A  NA   GV+   D + SD
Sbjct: 47  EGRSVLDLGCGTGIFACGAALLGAE-QVTGADIDPAAVAAAYRNAERAGVTA--DFVVSD 103

Query: 157 WFSSVEGLFDVIVSNPPYIESVIVDCLG 184
                   FD  V NPP+          
Sbjct: 104 IPDFNCRSFDTAVMNPPFGAQKKYADRP 131


>gi|255560978|ref|XP_002521501.1| dimethyladenosine transferase, putative [Ricinus communis]
 gi|223539179|gb|EEF40772.1| dimethyladenosine transferase, putative [Ricinus communis]
          Length = 366

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L   + R        +L++G GTG + L LL+ +   K V V+I  + +EI +  A   
Sbjct: 67  VLDTIVRRSAVEPTDTVLEIGPGTGNLTLRLLEVAR--KVVAVEIDKRMVEILRERASEQ 124

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPPY 174
           G+ ++ D +  D   +    F+++V+N PY
Sbjct: 125 GLQDKLDIIHKDALKAEFPNFNIVVANIPY 154


>gi|188585974|ref|YP_001917519.1| methyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350661|gb|ACB84931.1| methyltransferase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 186

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 57/166 (34%), Gaps = 37/166 (22%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCL-ALLKESPFFKGVGVDISCKALEIAKSNA 141
           D         ++      +LD+  G+G + L +L + +     +  +IS  A+++ ++N 
Sbjct: 26  DKVKESIFNMLQDITDTHVLDMFCGSGNLGLESLSRGARDVTFIDNNIS--AIKLVRNNV 83

Query: 142 VTNGVSERFDTLQSDWFSSVEG-------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194
                S + + ++ D F  +          FD++ ++PPY +      L  E       +
Sbjct: 84  KLCEFSSQVEIIKDDIFKWLSKGVQAKNTAFDLVFADPPYRQGYTDKLLSSE------EL 137

Query: 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFE 240
           +             I           GL  +E    Q   +    +
Sbjct: 138 A------------AIISH-------GGLLILEH--EQGKLIETELK 162


>gi|119510422|ref|ZP_01629556.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
 gi|119464951|gb|EAW45854.1| UbiE/COQ5 methyltransferase [Nodularia spumigena CCY9414]
          Length = 305

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 44/88 (50%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++ +  +L    K    RILDLG GTG+  L L +  P  + +G+D+S   L  A+  A 
Sbjct: 86  ETVVRQALIDAIKVKPRRILDLGCGTGSTTLKLKQAFPQAEVIGLDLSPYMLVRAEDKAR 145

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVS 170
             G+   ++   ++  +  E  FD++ +
Sbjct: 146 NAGLDIHWEHGNAETTNFPEAHFDLVTA 173


>gi|118589052|ref|ZP_01546459.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stappia aggregata
           IAM 12614]
 gi|118438381|gb|EAV45015.1| Cyclopropane-fatty-acyl-phospholipid synthase [Stappia aggregata
           IAM 12614]
          Length = 409

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 88/254 (34%), Gaps = 46/254 (18%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKH-ESIHRILG---WRDFYNVRLT 66
           L  + G    + I+          R +L +   R  K   S H  LG   +R++ +  +T
Sbjct: 109 LEALQGKPFTRFIM--------SVRHWLNSNTKRGAKRNISAHYDLGNAFYREWLDPSMT 160

Query: 67  LSSDTFEPRPETELLVDSALAFSLPRIEK-RDVVRILDLGTGTGAVCLALLKESPFFKGV 125
            SS  +                SL R    +   R+L++G G G     + K        
Sbjct: 161 YSSAIYSNETNDLEQAQREKYASLVRQTGIQPDHRVLEIGCGWGGFAEYVAKSV-GANVR 219

Query: 126 GVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS-------NPPYIESV 178
            + IS +  + A+      G++++ + +  D+     G+FD I S          Y  + 
Sbjct: 220 ALTISQEQFDYARERIYKAGLNDKVEVVFQDYRDE-NGVFDRIASIEMFEAVGEKYWPTY 278

Query: 179 IVDCLGLEVRDFDPRISLDGGIDGL----------SHYRTIADGVSRHLNKDGLC----- 223
                    +   P     GG+ GL            YR   D + R++   G+      
Sbjct: 279 FRQLS----KCLKP-----GGMAGLQIITIQDKMFDDYRRGTDFIQRYIFPGGMLPPPGR 329

Query: 224 SVEIGYNQKVDVVR 237
             EIG +  +D++ 
Sbjct: 330 LAEIGKSLGLDLMD 343


>gi|113869127|ref|YP_727616.1| ribosomal protein L11 methyltransferase [Ralstonia eutropha H16]
 gi|123032690|sp|Q0K6X3|PRMA_RALEH RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|113527903|emb|CAJ94248.1| Ribosomal protein L11 methyltransferase [Ralstonia eutropha H16]
          Length = 300

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 77  ETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEI 136
            T  L    L  +L     +    +LD G G+G + + + ++      VG+DI   A+E 
Sbjct: 150 PTTRLCMQWLEQNL-----KPGETVLDYGCGSGILAI-VARKLGAGDTVGIDIDPNAVEA 203

Query: 137 AKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
           ++ NA  N V   F   +S   +S + +   I+SNP
Sbjct: 204 SRYNAERNRVEASFALPESVSEASYDLVVANILSNP 239


>gi|113476665|ref|YP_722726.1| O-methyltransferase family protein [Trichodesmium erythraeum
           IMS101]
 gi|110167713|gb|ABG52253.1| O-methyltransferase, family 2 [Trichodesmium erythraeum IMS101]
          Length = 368

 Score = 55.1 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
               ++  +   I+D+G G     +AL K  P      +DI   + +IA+ N   N +S+
Sbjct: 188 LFENVDFSNFKNIVDVGGGDATNSIALAKAFPDVNITLMDI-PDSCKIAQKNIEQNQLSD 246

Query: 149 RFDTLQSDWF 158
           R    +S+ F
Sbjct: 247 RITVFKSNIF 256


>gi|325916706|ref|ZP_08178963.1| SAM-dependent methyltransferase [Xanthomonas vesicatoria ATCC
           35937]
 gi|325537055|gb|EGD08794.1| SAM-dependent methyltransferase [Xanthomonas vesicatoria ATCC
           35937]
          Length = 388

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 10/103 (9%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
           E+ D   +LDL   TG   +         + +GVDI    + IAK NA  N V  R   +
Sbjct: 212 EQVDGKSVLDLCCNTGGFAVY-AAARGASEVLGVDIDEDVIAIAKGNAKLNNV--RPKFV 268

Query: 154 QSDWFSSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDF 190
           Q+D F  +         FDV++   P   +   + +   ++ +
Sbjct: 269 QADIFPWLRDAANRGEQFDVVIL-DPAKMTRDREQVIPALKKY 310


>gi|325661177|ref|ZP_08149804.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472684|gb|EGC75895.1| RsmD family RNA methyltransferase [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 189

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 72  FEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISC 131
            + RP T+ + ++      P +      R LDL  G+G + +         + V V+ + 
Sbjct: 19  LDTRPTTDRIKETLFNMISPYLYD---CRFLDLFAGSGGIGIE-ALSRGAGEAVFVEQNP 74

Query: 132 KALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIESVIVDCLGLE 186
           KA+   K N     + ER  T+ +D  +++      G FD I  +PPY        L  +
Sbjct: 75  KAMACIKENLKKTKLEERAVTMTTDVMTALRRMEGSGTFDYIFMDPPY-----NKLLEKQ 129

Query: 187 VRDF 190
           V ++
Sbjct: 130 VLEY 133


>gi|317009650|gb|ADU80230.1| cyclopropane fatty acid synthase [Helicobacter pylori India7]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSVKAAQEY-GAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|304403943|ref|ZP_07385605.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9]
 gi|304346921|gb|EFM12753.1| Methyltransferase type 11 [Paenibacillus curdlanolyticus YK9]
          Length = 464

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 6/120 (5%)

Query: 45  SLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDL 104
               E +  + GW     +RL           E   LV              D   +L+ 
Sbjct: 211 RASIEPL--MKGWGGRSGIRLEERPAE---DTEIMQLVPVNANGKEVTFPYWDGATVLEC 265

Query: 105 GTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL 164
              TG+  L   K     K   +DIS  A++ A+ N   NG  +R + + +D F  +   
Sbjct: 266 FAHTGSFTLHACKYGAK-KVTCLDISEHAIDTARRNVARNGFDDRVEFVVADAFDYLRHQ 324


>gi|291563007|emb|CBL41823.1| Methyltransferase domain [butyrate-producing bacterium SS3/4]
          Length = 249

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 29/137 (21%)

Query: 89  SLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE 148
            L  I +    ++LD+G G G   L   K+      +G+DIS K L  A+ N   + +  
Sbjct: 35  ILGMIPELYKKKVLDIGCGMGQHALQYSKKGA-LSVLGIDISEKMLAYARKNNAASNIEY 93

Query: 149 RFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRT 208
           R   L  +    +E  FDVI S+  +            V +F+                 
Sbjct: 94  R--RLAFEELDDLEEKFDVITSSLAF----------DYVENFE----------------R 125

Query: 209 IADGVSRHLNKDGLCSV 225
           +   +  HLN++G C  
Sbjct: 126 LMKQIYSHLNENGKCVF 142


>gi|227112030|ref|ZP_03825686.1| 23S rRNA methyluridine methyltransferase [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 377

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  V L +   +F    +T   V +AL A +   + + ++  + DL  G G   L     
Sbjct: 198 FNQVPLYIRPQSFF---QTNPQVAAALYATARDWVAELNITSMWDLFCGVGGFGLHCA-- 252

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFS-SVEGLFDVIVSNPP 173
           S   +  G++IS +A+  A+ +A   G+    F  L S  F+ +   + D+++ NPP
Sbjct: 253 SSEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKAEIPDLVLVNPP 309


>gi|254172832|ref|ZP_04879506.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
 gi|214032988|gb|EEB73816.1| 23S rRNA (uracil-5-)-methyltransferase [Thermococcus sp. AM4]
          Length = 418

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A+       ++ D  R+LDL +G G   + L K    F+  G++I+  A+++A  NA  N
Sbjct: 266 AVELLREVAKRVDGERVLDLYSGVGTFGVYLAKR--GFRVEGIEINPFAVKMANRNAELN 323

Query: 145 GVSERFDTLQSDWFSSVEGLFDVIVSNPP 173
           GV+  F         S+   +D ++ +PP
Sbjct: 324 GVNASFRVGADRDVESLRA-YDTVIVDPP 351


>gi|208434911|ref|YP_002266577.1| cyclopropane fatty acid synthase [Helicobacter pylori G27]
 gi|210135201|ref|YP_002301640.1| cyclopropane fatty acid synthase [Helicobacter pylori P12]
 gi|217032292|ref|ZP_03437789.1| hypothetical protein HPB128_142g40 [Helicobacter pylori B128]
 gi|298735962|ref|YP_003728487.1| cyclopropane-fatty-acyl-phospholipid synthase [Helicobacter pylori
           B8]
 gi|208432840|gb|ACI27711.1| cyclopropane fatty acid synthase [Helicobacter pylori G27]
 gi|210133169|gb|ACJ08160.1| cyclopropane fatty acid synthase [Helicobacter pylori P12]
 gi|216946058|gb|EEC24671.1| hypothetical protein HPB128_142g40 [Helicobacter pylori B128]
 gi|298355151|emb|CBI66023.1| cyclopropane-fatty-acyl-phospholipid synthase [Helicobacter pylori
           B8]
 gi|317012813|gb|ADU83421.1| cyclopropane fatty acid synthase [Helicobacter pylori Lithuania75]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSVKAAQEY-GAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|167855165|ref|ZP_02477936.1| hypothetical protein HPS_07413 [Haemophilus parasuis 29755]
 gi|167853710|gb|EDS24953.1| hypothetical protein HPS_07413 [Haemophilus parasuis 29755]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 23/178 (12%)

Query: 5   RDSHSFLCRVTGLSSHQVIVDPD--SVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYN 62
           R+    L ++   S   + + P   ++L+  Q  FLT             ++L  R F  
Sbjct: 158 RELPMLLAQLPEKSVVSLNIQPQHSAILEGEQEIFLTE-----------QQVLEER-FNQ 205

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK----E 118
           + L +    F     T  +       +   I+   + ++ DL  G G   L         
Sbjct: 206 IPLFIRPQGFFQTNPT--VASQLYHTAQAWIKALPITQLWDLFCGVGGFGLHCAHTLQAT 263

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEG--LFDVIVSNPP 173
           +P     G++IS  A+  A  +A   G+   +F +L S  F+  E     D+++ NPP
Sbjct: 264 NPNVALTGIEISASAIASATKSAQQLGLQNVKFASLDSAQFALNEQGTTPDLVIVNPP 321


>gi|118470628|ref|YP_886876.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium smegmatis str. MC2 155]
 gi|118171915|gb|ABK72811.1| thiopurine S-methyltransferase (tpmt) superfamily protein
           [Mycobacterium smegmatis str. MC2 155]
          Length = 226

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 22/136 (16%)

Query: 56  GWRD-FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
           G    F  VR        EP+PE   L+D+                +LD G G  A  L 
Sbjct: 14  GEAPNFGGVRP--PWSIGEPQPEIRKLIDAGKFH----------GEVLDAGCGEAATALY 61

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVEGLFDVIVSNPP 173
           L  +   F  VG+D S  A+E+A++ A   G++   F+      F+  +G F  IV    
Sbjct: 62  LAAQ--GFTTVGLDQSPTAIELARAEAARRGLTNATFEVADISSFTGYDGRFGTIV---- 115

Query: 174 YIESVIVDCLGLEVRD 189
             +S +   + +E+RD
Sbjct: 116 --DSTLFHSMPVELRD 129


>gi|77164563|ref|YP_343088.1| ribosomal protein L11 methyltransferase [Nitrosococcus oceani ATCC
           19707]
 gi|254433402|ref|ZP_05046910.1| ribosomal protein L11 methyltransferase [Nitrosococcus oceani
           AFC27]
 gi|123594607|sp|Q3JC88|PRMA_NITOC RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|76882877|gb|ABA57558.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase
           [Nitrosococcus oceani ATCC 19707]
 gi|207089735|gb|EDZ67006.1| ribosomal protein L11 methyltransferase [Nitrosococcus oceani
           AFC27]
          Length = 292

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 61  YNVRLTLSSDTFEPRPET--ELLVDSALAF----------SLPRIEKRDVVR--ILDLGT 106
           +  +L +      P       LL+D  LAF           L  +   ++ +  I+D G 
Sbjct: 108 FGSQLWVCPSWLPPPEPEAVNLLLDPGLAFGTGTHPTTALCLEWLTNANLNQACIIDYGC 167

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G+G + +A LK       V VD   +AL   + NA  NGV  +           +E   D
Sbjct: 168 GSGILAIAALKLGATA-AVAVDHDPQALLATQENATHNGVISQLQVSSPSEL--IEIKAD 224

Query: 167 VIVSN 171
            +V+N
Sbjct: 225 FLVAN 229


>gi|15645044|ref|NP_207214.1| cyclopropane fatty acid synthase (cfa) [Helicobacter pylori 26695]
 gi|2313520|gb|AAD07482.1| cyclopropane fatty acid synthase (cfa) [Helicobacter pylori 26695]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKPGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSVKAAQEY-GAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|127511735|ref|YP_001092932.1| 23S rRNA methyluridine methyltransferase [Shewanella loihica PV-4]
 gi|167012646|sp|A3QB25|RUMB_SHELP RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumB; AltName:
           Full=23S rRNA(M-5-U747)-methyltransferase
 gi|126637030|gb|ABO22673.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Shewanella loihica
           PV-4]
          Length = 379

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 8/121 (6%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
             +F  V L +   +F        +       +     +     I DL  G G   L   
Sbjct: 195 EEEFNGVPLYIRPKSFF--QTHPEVAAKLYLSARKWTRELAPTSIWDLFCGVGGFGLHCA 252

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSV---EGLFDVIVSNP 172
             S      G++I  +A+  AK +A T G+   RF  L S  F+S    E   ++I+ NP
Sbjct: 253 --SKEVALTGIEIEAEAIACAKMSAETLGLDKVRFTALDSTSFASDSRGEEKPELIIVNP 310

Query: 173 P 173
           P
Sbjct: 311 P 311


>gi|321457477|gb|EFX68563.1| hypothetical protein DAPPUDRAFT_63026 [Daphnia pulex]
          Length = 253

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 36/162 (22%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT----NGVS 147
             E  +   +LD+G   G V L + ++    + VG+DI  K + IA+ N  T    +   
Sbjct: 21  WREWFEDKDVLDIGCNAGHVTLCVARDFNPKQIVGIDIDPKLISIARKNIKTYSSSHPTE 80

Query: 148 ERFDTLQSDWFSSVE--------GLFDVIVS----NPPYIESVIVDCLGLEVRDFDPRIS 195
            +F       + S+           F   VS    N  Y+     + L +   ++D  + 
Sbjct: 81  RQFPVSMPLMYGSIPSTHSSASSSRFPGNVSFVQGN--YVPESD-EFLQMVQPEYDAILC 137

Query: 196 L-----------DGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
           L           D G       +     +  HL   G   +E
Sbjct: 138 LSVTKWIHLNWKDAG------LKRFFQRIFAHLRPGGRLILE 173


>gi|319639269|ref|ZP_07994020.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Neisseria mucosa C102]
 gi|317399453|gb|EFV80123.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Neisseria mucosa C102]
          Length = 441

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 11/111 (9%)

Query: 72  FEPRPETEL---LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           ++P   T++   L +  +A ++  +  +   RI DL  G G   L L K       VG++
Sbjct: 266 YKPGDFTQINAQLNEVMVARAVRLLNPQKGERIADLFCGLGNFSLPLAKS--GASVVGIE 323

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNPP 173
            +   ++ A+ NA  N  +E      +D F + E      G FD ++ +PP
Sbjct: 324 GADYLVDRARENARLNRCAENMTFSVADLFDTDEKTVESWGKFDKMLLDPP 374


>gi|308186221|ref|YP_003930352.1| hypothetical RNA methyltransferase ybjF [Pantoea vagans C9-1]
 gi|308056731|gb|ADO08903.1| hypothetical RNA methyltransferase ybjF [Pantoea vagans C9-1]
          Length = 376

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 8/117 (6%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSAL-AFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
           F  V L +   +F    +T   V SAL A +   +    V  + DL  G G   L     
Sbjct: 197 FNGVPLWIRPQSFF---QTNPQVASALYATARDWVRALPVNSMWDLFCGVGGFGLHCA-- 251

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWFSSVEGLFDVIV-SNPP 173
           +P  +  G++IS +A++ A+ +A   G+   +F  L S  F++       +V  NPP
Sbjct: 252 TPEMELTGIEISAEAIKCARRSAEMLGLEKVQFAALDSTAFATGRDAVPQLVLVNPP 308


>gi|307323320|ref|ZP_07602530.1| Methyltransferase type 11 [Streptomyces violaceusniger Tu 4113]
 gi|306890809|gb|EFN21785.1| Methyltransferase type 11 [Streptomyces violaceusniger Tu 4113]
          Length = 229

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 28/125 (22%)

Query: 102 LDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161
           LDLG G G   + L ++   +    VDIS  A+E  +  A   GV++R  T Q D  SS 
Sbjct: 58  LDLGCGPGGDAIWLAQQ--GWHVTAVDISTTAVERVRERARDLGVADRVVTEQHDLASSF 115

Query: 162 E-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKD 220
             G FD++ +   Y  +                 SL  G         +    +  L  D
Sbjct: 116 PAGQFDLVSAQ--YFHTP---------------FSLSRG--------RVLRTAAGALRPD 150

Query: 221 GLCSV 225
           GL  +
Sbjct: 151 GLLLI 155


>gi|239814440|ref|YP_002943350.1| trans-aconitate 2-methyltransferase [Variovorax paradoxus S110]
 gi|259517151|sp|C5CSI6|TAM_VARPS RecName: Full=Trans-aconitate 2-methyltransferase
 gi|239801017|gb|ACS18084.1| Trans-aconitate 2-methyltransferase [Variovorax paradoxus S110]
          Length = 259

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 30/155 (19%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
              L R+   +  R++DLG G G     L    P  K VG D S   L  A+        
Sbjct: 21  QELLARVPLPEAARVVDLGCGPGNSTELLANRFPTAKVVGTDNSEAMLASARERL----P 76

Query: 147 SERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHY 206
             RF+      ++  +   D+I +N               V D +               
Sbjct: 77  QARFELSDIATWAPQDQAPDLIYAN----------AALQWVPDHE--------------- 111

Query: 207 RTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241
             +   +   L   G+ ++++  N++    R+  +
Sbjct: 112 -QLIPRLFAALAPGGVLAIQMPDNREEPTHRLMRA 145


>gi|170693497|ref|ZP_02884656.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           graminis C4D1M]
 gi|170141652|gb|EDT09821.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia
           graminis C4D1M]
          Length = 404

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I+ +   R+LD+G G GA+ L   ++    + VGV +S    ++A +     G
Sbjct: 158 IDHILTKIQVQPGQRLLDIGCGWGALVLRAAQKF-GAQCVGVTLSQNQFDLATARVKAAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  + +    D +  VEG FD I S
Sbjct: 217 LENQIEIRLQD-YRDVEGRFDRITS 240


>gi|67459646|ref|YP_247270.1| hypothetical protein RF_1254 [Rickettsia felis URRWXCal2]
 gi|67005179|gb|AAY62105.1| unknown [Rickettsia felis URRWXCal2]
          Length = 509

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 38/164 (23%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
              + +  +IL+LG   G   +      P    VGVD+S   ++ A  N    G+    +
Sbjct: 64  NAPEVENAKILELGCAAGGNLIPHAVLYPKAHFVGVDLSKVQVDEANKNVKELGLK-NIE 122

Query: 152 TLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                        G FD I+ +       ++  +   VRD                   I
Sbjct: 123 FHHCSITDIDDSFGKFDYIICH------GVISWVPKTVRD------------------KI 158

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +  +++L+ +G+    I YN               +V   +D 
Sbjct: 159 FEVCNKNLSPNGIAY--ISYNTLP---------GWNMVRTIRDM 191


>gi|57641798|ref|YP_184276.1| N6-adenine-specific DNA methylase [Thermococcus kodakarensis KOD1]
 gi|57160122|dbj|BAD86052.1| predicted N6-adenine-specific DNA methylase [Thermococcus
           kodakarensis KOD1]
          Length = 365

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 71/199 (35%), Gaps = 29/199 (14%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRP----ETELLVDSALAFSLPRIEKRDVVRILDLGTGTG 109
           ++G   F  +  T    +   RP    +    + +++A +L  + + +    +D   G+G
Sbjct: 171 LVGEVFFLGID-TTGDSSLHKRPWRVYDHPAHLKASIANALIELAEPNGGSFIDPFCGSG 229

Query: 110 AVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDV 167
            + + L       + +G++   K +  A+ NA++ GV ++ + +Q D    S      D 
Sbjct: 230 TILIELALRGYKGRIIGLEKYRKHIRGAEMNALSAGVLDKIEFIQGDATKLSQYVESVDF 289

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
            VSN PY   +    +                      Y      +S+ L K G+     
Sbjct: 290 AVSNLPYGLKIGRKSMIP------------------RLYMAFFSELSKVLEKRGVFI--- 328

Query: 228 GYNQKVDVVRIFESRKLFL 246
              +K  + R        +
Sbjct: 329 -TTEKKAIERAILDNGFKI 346


>gi|125972549|ref|YP_001036459.1| biotin biosynthesis protein BioC [Clostridium thermocellum ATCC
           27405]
 gi|281416739|ref|ZP_06247759.1| biotin biosynthesis protein BioC [Clostridium thermocellum JW20]
 gi|125712774|gb|ABN51266.1| biotin biosynthesis protein BioC [Clostridium thermocellum ATCC
           27405]
 gi|281408141|gb|EFB38399.1| biotin biosynthesis protein BioC [Clostridium thermocellum JW20]
          Length = 283

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           ++ +  + ILD+G GTG +   LL   P  +   +DI+   +E A+            + 
Sbjct: 38  LDSKSRLDILDVGCGTGYLTKLLLDRWPDARITAIDIAPGMIEYAR----DRFNESNVEF 93

Query: 153 LQSDWFSS-VEGLFDVIVSN 171
              D   + +   +D+++SN
Sbjct: 94  ACLDIEEAELNQKYDLVISN 113


>gi|85112247|ref|XP_964308.1| hypothetical protein NCU00504 [Neurospora crassa OR74A]
 gi|28926085|gb|EAA35072.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 253

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 33/181 (18%)

Query: 101 ILDLGTGTGA-VCLALLKES-----PFFKGVGVDISCKALEIA--------KSNAVTNGV 146
           IL++G G+G  +       S     P      +D+S  A              N  T+G 
Sbjct: 56  ILEVGPGSGVVIAFLTAHASTIFGSPHVLSTAIDVSPFACAATNLTVSKAVSENTSTSGF 115

Query: 147 SERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLG-------LEVRDFDPRISL-- 196
                  Q D  S    G  DV+V NPPY+ +  +            E   F+    L  
Sbjct: 116 WT--SATQGDLVSPFRPGSVDVLVFNPPYVPTPDLPAPPPTGLQALKEKTTFEEDSHLLE 173

Query: 197 ---DGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-GYNQKVDVV---RIFESRKLFLVNA 249
               GG DG+     + + +   L++ G+  + +   N+  +V    R+      +    
Sbjct: 174 LTYAGGRDGMETTDRLIEALPGVLSERGVAYILLCAQNKPEEVKGRIRVMGGEGKWKAET 233

Query: 250 F 250
            
Sbjct: 234 V 234


>gi|113475847|ref|YP_721908.1| type 12 methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110166895|gb|ABG51435.1| Methyltransferase type 12 [Trichodesmium erythraeum IMS101]
          Length = 403

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 64/180 (35%), Gaps = 44/180 (24%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
           A +F   +  K+  +RILD G GTG+    L+  +P    VG+D+S  AL +AK     +
Sbjct: 42  AYSFCTGQKPKKQDIRILDAGCGTGSSTDYLVHLNPQASVVGIDLSSGALRVAKERCSRS 101

Query: 145 GVSERFDTLQSDWFS--SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
           G S R D      +    +EG F  I                + V    P          
Sbjct: 102 GAS-RVDFHHLSIYDVGRLEGEFKFINC--------------VGVLHHLP---------- 136

Query: 203 LSHYRTIADGVSRHLNKDG----LCSVEIGYNQKVDVVRIFESRKLFLVNAFKDYGGNDR 258
               R I +   + L   G        E+G  +    +R+ +      +       GN+R
Sbjct: 137 -DPIRGIQNLALK-LAPGGIMHIFVYAELGRWE----IRLMQQA----IAI---LQGNER 183


>gi|323139612|ref|ZP_08074656.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylocystis sp.
           ATCC 49242]
 gi|322395162|gb|EFX97719.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylocystis sp.
           ATCC 49242]
          Length = 412

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 38/182 (20%)

Query: 52  HRILGWRDFYNVRLTLSSDTF----EPRPETELLVDSALAFSLPR----IEKRDVVRILD 103
           H  LG  DFY  RL L    F      R + + L + A    + R    ++      +L+
Sbjct: 147 HYDLGN-DFY--RLWLDPQMFYSSGIYRSDDDTL-EQAQRNKIDRVVELLDAHKGETVLE 202

Query: 104 LGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG 163
           +G G G +   + K        G+ +S + L  A+  +  +G+  + D    D +  V G
Sbjct: 203 VGCGWGGLAPEMAKAGAGA-ITGLTLSKEQLANARDVSSKHGLQAQVDLRLQD-YRDVGG 260

Query: 164 LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLC 223
           +FD IVS         ++ +    RD+ P             Y      +   L K G  
Sbjct: 261 VFDRIVS---------IEMIEAVGRDYWP------------VY---FATLRDRLAKGGHI 296

Query: 224 SV 225
            +
Sbjct: 297 VL 298


>gi|288904883|ref|YP_003430105.1| O-methyltransferase [Streptococcus gallolyticus UCN34]
 gi|306830935|ref|ZP_07464097.1| O-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325977824|ref|YP_004287540.1| O-methyltransferase, family 3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731609|emb|CBI13164.1| putative O-methyltransferase [Streptococcus gallolyticus UCN34]
 gi|304426958|gb|EFM30068.1| O-methyltransferase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325177752|emb|CBZ47796.1| O-methyltransferase, family 3 [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 233

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 44/104 (42%), Gaps = 3/104 (2%)

Query: 70  DTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDI 129
           + F  +    ++    +A+    ++      IL++GT  G   L + + +P  K   +D 
Sbjct: 41  EAFAHQENIPIIQHEVVAYFRFLMQTLQPKNILEIGTAIGFSALLMAENAPDAKITTLDR 100

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDW---FSSVEGLFDVIVS 170
           + + +  AK N       ++   ++ D     S++EG FD +  
Sbjct: 101 NPEMIAFAKENFAKYDTRKQITLVEGDAVDTLSTLEGEFDFVFM 144


>gi|253999017|ref|YP_003051080.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           SIP3-4]
 gi|253985696|gb|ACT50553.1| Cyclopropane-fatty-acyl-phospholipid synthase [Methylovorus sp.
           SIP3-4]
          Length = 348

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 60/178 (33%), Gaps = 35/178 (19%)

Query: 52  HRILG-WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGA 110
              LG  R + +     ++ T     E E L   AL  +    + ++   IL+LG G G+
Sbjct: 80  QYCLGKHRKYSSCYWDKNTRTL---DEAEAL---ALQLTCEHADLQNGHSILELGCGWGS 133

Query: 111 VCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEG-LFDVIV 169
           + L + K  P  +   V  S    E   S A+  G+      +  D      G  FD IV
Sbjct: 134 LTLWMAKHFPSSRITAVSNSKSQREYIMSEALKRGLP-NIQVITCDMNEFNPGMQFDRIV 192

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI 227
           S                V  F+           + +Y T+   V   L   G   + I
Sbjct: 193 S----------------VEMFEH----------MRNYDTMFKHVHDWLVPGGRFFMHI 224


>gi|254557705|ref|YP_003064122.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum JDM1]
 gi|300769500|ref|ZP_07079386.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308181789|ref|YP_003925917.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|254046632|gb|ACT63425.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum JDM1]
 gi|300492915|gb|EFK28097.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308047280|gb|ADN99823.1| cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 397

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 32/182 (17%)

Query: 52  HRILGWRDFYN--VRLTLSSDTFEPRPETELLVDSALA---FSLPRIEKRDVVRILDLGT 106
           H  +G  DFY   +  T++      + +T+ L ++ +      + ++  +    +LD+G 
Sbjct: 115 HYDVGN-DFYKMWLDPTMTYSCAYFKHDTDTLEEAQIHKVHHIIQKLNPQPGKTLLDIGC 173

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFD 166
           G G + L   KE    K VGV +S +   +        G+S+  +    D+    +  FD
Sbjct: 174 GWGTLMLTAAKEY-GLKVVGVTLSQEQYNLVAQRIKDEGLSDVAEVRLQDYRELGDETFD 232

Query: 167 VIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVE 226
            I S                V  F+  +    G D L+ Y    + V+ +L  DG+  + 
Sbjct: 233 YITS----------------VGMFE-HV----GKDNLAMY---FERVNHYLKADGVALL- 267

Query: 227 IG 228
            G
Sbjct: 268 HG 269


>gi|212224325|ref|YP_002307561.1| protein-L-isoaspartate O-methyltransferase [Thermococcus onnurineus
           NA1]
 gi|229485661|sp|B6YX51|PIMT_THEON RecName: Full=Protein-L-isoaspartate O-methyltransferase; AltName:
           Full=L-isoaspartyl protein carboxyl methyltransferase;
           AltName: Full=Protein L-isoaspartyl methyltransferase;
           AltName: Full=Protein-beta-aspartate methyltransferase;
           Short=PIMT
 gi|212009282|gb|ACJ16664.1| hypothetical L-isoaspartyl protein carboxyl methyltransferase
           [Thermococcus onnurineus NA1]
          Length = 220

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 5/106 (4%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
             +A  L   E  + + +LD+GTG+G    AL  E        V+   + +E A+ N   
Sbjct: 67  HMVAIMLELAELEEGMNVLDIGTGSGWNA-ALAAELVKTDVYTVERIPELVEFARKNLEK 125

Query: 144 NGVSERFDTLQSDWFSSVEGL--FDVIV--SNPPYIESVIVDCLGL 185
            G ++R   +  D          +D I+  +  P +   +V+ L  
Sbjct: 126 AGYADRVHVIIGDGTKGFPPKAPYDRILVAAGAPNVPEPLVEQLKP 171


>gi|254472108|ref|ZP_05085508.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudovibrio sp.
           JE062]
 gi|211958391|gb|EEA93591.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudovibrio sp.
           JE062]
          Length = 413

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           +R F +  L  S   +    +T      A L   + +++ +  + +L++G G G++ + +
Sbjct: 133 YRLFLDDGLNYSCAYYRTPEDTLEEAQQAKLDHIVAKLDLKPGMTVLEIGGGWGSLAIRM 192

Query: 116 LKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
            +     +   +++S + ++IA+      G+  + + +  D ++  EG FD +VS
Sbjct: 193 AQA--GAQVTSLNVSTEQIKIAEERVKAAGLEGKVEFVCLD-YNEFEGEFDRVVS 244


>gi|209551632|ref|YP_002283549.1| methyltransferase small [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537388|gb|ACI57323.1| methyltransferase small [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 338

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 2/120 (1%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSN 140
           +D+       R+ +     + D G G G + + L + S    +    +    ALE A+ N
Sbjct: 179 IDAGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADHAALEAARDN 238

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N  +        D     V+  +D+++ NPP+ E    D    +        +L GG
Sbjct: 239 LAENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPFHEGHAADPALGQAMIKTAASALRGG 298


>gi|73748240|ref|YP_307479.1| putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Dehalococcoides sp. CBDB1]
 gi|147669022|ref|YP_001213840.1| demethylmenaquinone methyltransferase [Dehalococcoides sp. BAV1]
 gi|289432291|ref|YP_003462164.1| UbiE/COQ5 methyltransferase [Dehalococcoides sp. GT]
 gi|73659956|emb|CAI82563.1| putative ubiquinone/menaquinone biosynthesis methlytransferase UbiE
           [Dehalococcoides sp. CBDB1]
 gi|146269970|gb|ABQ16962.1| demethylmenaquinone methyltransferase [Dehalococcoides sp. BAV1]
 gi|288946011|gb|ADC73708.1| UbiE/COQ5 methyltransferase [Dehalococcoides sp. GT]
          Length = 258

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 46/149 (30%), Gaps = 27/149 (18%)

Query: 78  TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIA 137
               + + L      ++ R   ++LDL  GTG V     +          DIS   L +A
Sbjct: 49  HRFWMRTVLKIIGKFMKGRTSTKMLDLACGTGFVTFNTARNFENIDIDSFDISPDMLAVA 108

Query: 138 KSNAVTNGVSERFDTLQSDWFSSV-EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISL 196
           K               Q D      E  +D+I ++  Y             R+F      
Sbjct: 109 KERYEKYFKGRSIKFWQGDAEVPFGENKYDLITTSFAY-------------RNF------ 149

Query: 197 DGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                GL+      + V R L   GL  +
Sbjct: 150 --ANKGLA-----TENVFRALKPGGLFII 171


>gi|325958741|ref|YP_004290207.1| cobalt-precorrin-6Y C(15)-methyltransferase [Methanobacterium sp.
           AL-21]
 gi|325330173|gb|ADZ09235.1| cobalt-precorrin-6Y C(15)-methyltransferase (decarboxylating)
           [Methanobacterium sp. AL-21]
          Length = 187

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +      L + E  +   ++D+G GTG + +   K++   K   +D++  A +  + N  
Sbjct: 19  EEIRCILLCKSEVSEEDVVVDIGCGTGGLTVEFAKKAK--KVYSIDLNPLATQTTQENVN 76

Query: 143 TNGVSERFDTLQSDWFSSVEGL--FDVIV 169
            + V  + + +Q+D   ++E L  FDV++
Sbjct: 77  KHQVKNKVEVIQADGLEALEDLEEFDVLM 105


>gi|320106604|ref|YP_004182194.1| type 11 methyltransferase [Terriglobus saanensis SP1PR4]
 gi|319925125|gb|ADV82200.1| Methyltransferase type 11 [Terriglobus saanensis SP1PR4]
          Length = 277

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 28/134 (20%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
           R+      R+LD+  GTG + + L ++       GVDI+   L  A+  A   G++  FD
Sbjct: 41  RLALPPESRVLDVACGTGNLAIPLARQ--GCVVTGVDIAPNLLVQARERAAAEGLTVSFD 98

Query: 152 TLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIAD 211
              ++     +  FD +V+         +     EV                     +  
Sbjct: 99  EGDAEELPYDDETFDAVVT-----MFGAMFAPRPEV---------------------VTA 132

Query: 212 GVSRHLNKDGLCSV 225
            ++R L   GL ++
Sbjct: 133 ELARVLKPGGLLAM 146


>gi|288936243|ref|YP_003440302.1| hypothetical protein Kvar_3390 [Klebsiella variicola At-22]
 gi|290510701|ref|ZP_06550071.1| ribosomal RNA large subunit methyltransferase I [Klebsiella sp.
           1_1_55]
 gi|288890952|gb|ADC59270.1| Protein of unknown function methylase putative [Klebsiella
           variicola At-22]
 gi|289777417|gb|EFD85415.1| ribosomal RNA large subunit methyltransferase I [Klebsiella sp.
           1_1_55]
          Length = 400

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+L+  + TG   ++        +   VD S +AL++A+ N   NG+   + + ++ D F
Sbjct: 227 RVLNCFSYTGGFAVS-ALMGGCRQVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVF 285

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FDVIV +PP         +              G   G   Y+ I   
Sbjct: 286 KLLRKYRDQGEKFDVIVMDPPKFVENKSQLM--------------GACRG---YKDINML 328

Query: 213 VSRHLNKDGLCS 224
             + LN  G+  
Sbjct: 329 AIQLLNPGGVLL 340


>gi|262041046|ref|ZP_06014265.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259041604|gb|EEW42656.1| 23S rRNA (uracil-5-)-methyltransferase RumB [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 375

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            + LG   F  V L +   +F        +     A +   +    V  + DL  G G  
Sbjct: 190 QQALGEV-FNGVPLWIRPQSFF--QTNPAVASRLYATARDWVRALPVQHMWDLFCGVGGF 246

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSE-RFDTLQSDWFSSVE-GLFDVIV 169
            L     +P  +  G++I+ +A+  A+ +A   G+S   F  L S  F++ E     +++
Sbjct: 247 GLHCA--TPTMRLTGIEIAPEAIACARQSAAQLGLSNLHFQALDSTQFATHEADTPQLVL 304

Query: 170 SNPPYIESVIVDCLGLEVRDFDPRIS 195
            NPP         +G E+ D+  R++
Sbjct: 305 VNPP------RRGIGAELCDYLSRMA 324


>gi|160943353|ref|ZP_02090588.1| hypothetical protein FAEPRAM212_00839 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445379|gb|EDP22382.1| hypothetical protein FAEPRAM212_00839 [Faecalibacterium prausnitzii
           M21/2]
          Length = 203

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 43/187 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +   + L  ++      +LD G G GA    LLK  P  K  G+D S  ++E A+     
Sbjct: 28  AMAEWGLRFLQPAPDAMVLDCGCGGGANIKTLLKLCPNGKVQGIDYSAVSVEKARKVNAR 87

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              + R    Q+             V+  P+           E   F P ++ +      
Sbjct: 88  ALAAGRCTVQQAS------------VAELPFEAEQFDVVTAFETVYFWPELAQN------ 129

Query: 204 SHYRTIADGVSRHLNKDGLCSV--EIG--------YNQ---------KVDVVRIFESRKL 244
                    + R L   G+  +  E          + Q            + +  E    
Sbjct: 130 ------FREIYRVLKPGGIFFICNEANGETTKDDKWTQIIDGMTIYTDTALKKYLEKAGF 183

Query: 245 FLVNAFK 251
             + + K
Sbjct: 184 CQIQSHK 190


>gi|270284909|ref|ZP_06194303.1| rRNA methyltransferase [Chlamydia muridarum Nigg]
 gi|270288937|ref|ZP_06195239.1| rRNA methyltransferase [Chlamydia muridarum Weiss]
 gi|14195332|sp|P58106|Y118_CHLMU RecName: Full=Uncharacterized RNA methyltransferase TC_0118
          Length = 397

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 11/114 (9%)

Query: 65  LTLSSDTF-EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFK 123
             +   +F +P+       +  +      I       +LDL  G G + ++L   SP+ K
Sbjct: 220 FHVRPRSFFQPQSRQA---EKIIQTIKDFISPTGEETLLDLYCGAGTIGISL---SPYVK 273

Query: 124 -GVGVDISCKALEIAKSNAVTNGVSERF---DTLQSDWFSSVEGLFDVIVSNPP 173
             +GV++   A+  A+ N   N  +      D  Q           D++V +PP
Sbjct: 274 KIIGVELVPDAVASAQENIQLNSANMEVFLEDAKQFCRRHEHLPPLDIVVIDPP 327


>gi|551666|emb|CAA57169.1| magnesium-protoporphyrin O-methyltransferase [Rhodobacter
           sphaeroides]
          Length = 222

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFF 122
           RLT S+     R       D+  A  L R+ K    +R+LD G G G + + L       
Sbjct: 25  RLTSSAPVSRIRQTVREGRDTMRAKMLWRLPKDLTGLRVLDAGCGAGQMTVELAAR--GA 82

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
           + + VDIS + +EIA+   +     +R      D  +   G FD +V+
Sbjct: 83  QVMAVDISPQLVEIARK-RLPPEHQDRVTFASGDMLADDLGRFDYVVA 129


>gi|254453056|ref|ZP_05066493.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238]
 gi|198267462|gb|EDY91732.1| SAM-dependent methyltransferase [Octadecabacter antarcticus 238]
          Length = 404

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 23/102 (22%)

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCL 183
           S  ALE+AK+ A   GV++RF+T Q D F  +E L      FDV+V +PP          
Sbjct: 262 SAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPPAFAPSKPSA- 320

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                             GL  Y  +A   +  +   G   +
Sbjct: 321 ----------------EKGLRAYERLARLAAPLVKDGGYLVL 346


>gi|171184777|ref|YP_001793696.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Thermoproteus neutrophilus V24Sta]
 gi|170933989|gb|ACB39250.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Thermoproteus neutrophilus V24Sta]
          Length = 189

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
              A  + +++     R+LD+G GTG+V +             +D + +A+E+   NA  
Sbjct: 24  EVRAVVVSKLKVGPGDRMLDVGCGTGSVAVEAALM--GAWVYAMDKNPRAVELTARNAAK 81

Query: 144 NGVSERFDT---LQSDWFSSVEGLFDVI 168
            GV++R           F+   G FD +
Sbjct: 82  FGVADRVKAEVEEAPRDFAKAGGPFDAV 109


>gi|322378923|ref|ZP_08053339.1| putative O-methyltransferase [Helicobacter suis HS1]
 gi|322380243|ref|ZP_08054464.1| O-methyltransferase [Helicobacter suis HS5]
 gi|321147321|gb|EFX42000.1| O-methyltransferase [Helicobacter suis HS5]
 gi|321148665|gb|EFX43149.1| putative O-methyltransferase [Helicobacter suis HS1]
          Length = 238

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 38/182 (20%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           + F+LP I+K D  R+LD+G G G V +   K+        ++I       A+ N+    
Sbjct: 20  VNFALPFIKKGD--RLLDVGAGCGIVGILCAKKYANP-LDLIEIDSNLAFFARLNSQNLP 76

Query: 146 VSERFDTLQSDWFS-SVEGLFDVIVSNPPYIE-SVIVDCLGLEVR----DFDPRISLDGG 199
              +    Q+++    +   +D I+SNPPY     +      + R     F P       
Sbjct: 77  ---QAQVYQANFLDYPLTPGYDAILSNPPYYPAESLKSPYTQKARATNQSFLPL------ 127

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV---------EIGYNQKVDVVRIFESRKLFLVNAF 250
              L          S  L   G   +          I   QK  +  I     L  V+ F
Sbjct: 128 ---LDF----CTKASFLLKPKGYFILCYHASLIDTLISALQKAKLKAIL----LRFVHPF 176

Query: 251 KD 252
           KD
Sbjct: 177 KD 178


>gi|307243704|ref|ZP_07525844.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Peptostreptococcus stomatis DSM 17678]
 gi|306492913|gb|EFM64926.1| precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT
           subunit [Peptostreptococcus stomatis DSM 17678]
          Length = 188

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +   A SL +++   V   LD+G+GTG+V +    ++   +   ++    AL++ + N  
Sbjct: 16  EEVRAISLAKLDLSGVCNFLDIGSGTGSVTVEAALKNKDIRVTSIEKDQAALDLTRLNIE 75

Query: 143 TNGVSERFDT 152
             G+      
Sbjct: 76  KFGLKNVVQV 85


>gi|294624116|ref|ZP_06702857.1| XamI DNA methyltransferase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601585|gb|EFF45581.1| XamI DNA methyltransferase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 528

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 21/166 (12%)

Query: 24  VDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD----TFEPRPETE 79
             P S L  R+   +  AI R      +    G   FY++R           + P P   
Sbjct: 33  TAPVSALKPREIDTICKAIARGAD--PL----GEA-FYSIRSATERRAAGAVYTPAP--- 82

Query: 80  LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKS 139
            +V S + +      +    RI+D G G+G   LA  +     + V V++   A  + ++
Sbjct: 83  -IVRSMMTWL---AAQGSPARIVDPGAGSGRFILAAGEAFRDAQLVAVEMDPLAALMLRA 138

Query: 140 NAVTNGVSERFDTLQSDWFSSVEGLFDVI---VSNPPYIESVIVDC 182
           N    G ++R   +  D+          I   + NPPY+    +  
Sbjct: 139 NLSARGWTDRATVMVKDYRGVKLPRCAGITAFIGNPPYVRHHDIGE 184


>gi|238028469|ref|YP_002912700.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia glumae
           BGR1]
 gi|237877663|gb|ACR29996.1| Cyclopropane-fatty-acyl-phospholipid synthase [Burkholderia glumae
           BGR1]
          Length = 406

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           +   L +I+ +   R+LD+G G GA+ L   ++      VGV +S    ++A       G
Sbjct: 158 IDHILTKIQLQPGQRLLDIGCGWGALVLRAAQKF-GAHCVGVTLSQNQFDLATERVRQAG 216

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +  + +    D +  V+G FD I S
Sbjct: 217 LENQIEIRLQD-YRDVDGQFDRITS 240


>gi|254437351|ref|ZP_05050845.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus
           307]
 gi|198252797|gb|EDY77111.1| Putative RNA methylase family UPF0020 [Octadecabacter antarcticus
           307]
          Length = 404

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 23/102 (22%)

Query: 130 SCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL------FDVIVSNPPYIESVIVDCL 183
           S  ALE+AK+ A   GV++RF+T Q D F  +E L      FDV+V +PP          
Sbjct: 262 SAPALELAKAGAEATGVADRFETRQGDAFDVLEALGAEEEVFDVVVCDPPAFAPSKPSA- 320

Query: 184 GLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
                             GL  Y  +A   +  + + G   +
Sbjct: 321 ----------------EKGLRAYERLARLAAPLVKEGGYLVL 346


>gi|297619725|ref|YP_003707830.1| hypothetical protein Mvol_1200 [Methanococcus voltae A3]
 gi|297378702|gb|ADI36857.1| protein of unknown function Met10 [Methanococcus voltae A3]
          Length = 379

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 37/193 (19%)

Query: 22  VIVDPDSVLDDRQRFFLTN----------AIVRS---LKHES----IHRILGWRDF---- 60
           VI+     +   +R  L            A+ R    +K E     +  + G +D     
Sbjct: 140 VILQISDEISKEERLKLGEKAKELIPSVRAVFRRESDVKGEYRVRDLEHLAGEKDTLTLY 199

Query: 61  ----YNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
               Y + + ++   F PR      +       + +IEK D+  I+D+  G G   +A  
Sbjct: 200 KENGYKLYVDVAKVYFSPR------LSWERNRIMQKIEKDDI--IIDMFCGVGPYSIACK 251

Query: 117 KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIE 176
                 K   +D++ +A+++ K N   N +  +   +  D    V    + I+ N P   
Sbjct: 252 DAK---KIYSIDVNPEAIKLLKENIKLNNLENKIIPILEDV-RKVNLKGNRIIMNLPKYA 307

Query: 177 SVIVDCLGLEVRD 189
           +  VD     V D
Sbjct: 308 NQFVDKALELVED 320


>gi|152971649|ref|YP_001336758.1| 23S rRNA 5-methyluridine methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238896246|ref|YP_002920982.1| 23S rRNA 5-methyluridine methyltransferase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|226725383|sp|A6TD57|RUMA_KLEP7 RecName: Full=23S rRNA (uracil-5-)-methyltransferase RumA; AltName:
           Full=23S rRNA(M-5-U1939)-methyltransferase
 gi|150956498|gb|ABR78528.1| 23S rRNA (uracil-5-)-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238548564|dbj|BAH64915.1| 23S rRNA (uracil-5-)-methyltransferase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 434

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 20/136 (14%)

Query: 49  ESIHRILGWRDFY---NVRLTLSSDTFEPRPETEL---LVDSALAFSLPRIEKRDVVRIL 102
           E +  I G   +Y    +RL      F PR   ++   +    +  +L  ++ R   R+L
Sbjct: 237 EILEHIHGEAPWYTSDGLRL-----VFSPRDFIQVNDGVNQQMVRTALEWLDLRPEDRVL 291

Query: 103 DLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE 162
           DL  G G   L L   +     VGV+     +E  + NA  NG+S        +    V 
Sbjct: 292 DLFCGMGNFTLPLATRA--AHVVGVEGVPALVEKGRENAARNGLS-NVTFFHENLEEDVT 348

Query: 163 GL------FDVIVSNP 172
                   FD ++ +P
Sbjct: 349 RQAWAKHGFDKVLLDP 364


>gi|7157956|gb|AAF37354.1|AF202319_3 BchM [Rhodospirillum rubrum]
          Length = 236

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 43/122 (35%), Gaps = 3/122 (2%)

Query: 64  RLTLSSDTFEPRPETELLVDSALAFSLPRIEKR-DVVRILDLGTGTGAVCLALLKESPFF 122
           RLT  +   + R       DS     L  +       R+LD G GTG    A+       
Sbjct: 27  RLTSDAPVGKIRATVRAGRDSMRETLLSWLPDDLSGTRLLDAGCGTG--SFAVEAARRGA 84

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDC 182
             V +DIS   +++A+  A       R +    D      G FD +V+    I     D 
Sbjct: 85  SVVAIDISPTLIDMARERAAEVTGPGRIEFRVGDMLDPALGEFDHVVAMDSLIHYQAADT 144

Query: 183 LG 184
           + 
Sbjct: 145 VQ 146


>gi|294494733|ref|YP_003541226.1| methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
 gi|292665732|gb|ADE35581.1| Methyltransferase type 11 [Methanohalophilus mahii DSM 5219]
          Length = 258

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 34/173 (19%)

Query: 52  HRILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAV 111
            +I  + D+ +   T  + +     E   L   +L   L     +  +++LD+GTG G +
Sbjct: 5   QQIEEYWDWRSTSYTNGATSL--GEEERELWKQSLFPYL----GQGPLKVLDIGTGRGFL 58

Query: 112 CLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSN 171
            L L       +   +DIS   LE A+  A+   +  +F+   ++  +  +  FDV+VS 
Sbjct: 59  ALLLADM--GHEVTAIDISQSMLEKAQREAIKLNLDIKFEKGDAENLAFADSSFDVVVS- 115

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
             Y+   +           +P  +L                  R L  +G   
Sbjct: 116 -KYLLWTLP----------EPENTL--------------KEWRRVLLPEGKII 143


>gi|268323944|emb|CBH37532.1| hypothetical membrane protein, methyltransferase domain family
           [uncultured archaeon]
          Length = 257

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 79/217 (36%), Gaps = 37/217 (17%)

Query: 58  RDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLK 117
             F  +   LS   +        L  +     + ++      + LD+GTG+G   + + K
Sbjct: 48  AFFIFLFFYLSCAYYLFAKNGNELQHNIHHAMIDKLSWNGEGKALDIGTGSGGCAIKVAK 107

Query: 118 ESPFFKGVGVDISCKAL----EIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVSN 171
           + P  K +G+D   KA     E+ ++NA T GV +R +  ++        +G FD  VSN
Sbjct: 108 KFPNSKVMGIDYWGKAWSYSMEVCENNAATEGVGQRTNFQRASAADLPFDDGEFDAAVSN 167

Query: 172 PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG------LCSV 225
             +           EVRD   +             R +     R + K G      L   
Sbjct: 168 FVF----------HEVRDEKDK-------------REVVQEALRVVKKGGAYSFQDLFLS 204

Query: 226 EIGYNQKVDVVRIFESRKLFLVNA--FKDYGGNDRVL 260
           E  Y +  D+++      +  V+     D     R+L
Sbjct: 205 EKIYGEIEDLLKTIRDWGIEEVHFTSTADLVDIPRIL 241


>gi|260435757|ref|ZP_05789727.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109]
 gi|260413631|gb|EEX06927.1| 23S rRNA (uracil-5-)-methyltransferase [Synechococcus sp. WH 8109]
          Length = 465

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 10/122 (8%)

Query: 57  WRDFYNVRLTLSSDTFE--PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLA 114
              F  ++L LSS TF     P+ E +V     + L +       R++D   G G + L 
Sbjct: 277 EEQFCGIKLALSSTTFVQVNTPQAERIVQRLTDWLLVQC---AGARVVDAYCGVGTIALP 333

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVI---VSN 171
           L K    F   G++++  ++E A+ NA+ NG+S R      D    +    D     V +
Sbjct: 334 LSKA--GFNVQGLELNPDSVEQARLNAMHNGLSSRCAFDAGDVADLLAAHLDDCQALVLD 391

Query: 172 PP 173
           PP
Sbjct: 392 PP 393


>gi|153002466|ref|YP_001368147.1| ribosomal protein L11 methyltransferase [Shewanella baltica OS185]
 gi|166223438|sp|A6WTE5|PRMA_SHEB8 RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11
           Mtase
 gi|151367084|gb|ABS10084.1| ribosomal protein L11 methyltransferase [Shewanella baltica OS185]
          Length = 293

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 98  VVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW 157
              ++D G G+G + +A LK        G+DI  +A++ +++NA  N V+++      + 
Sbjct: 159 NKEVIDFGCGSGILAVAALKLGAK-NVTGIDIDYQAIDASRANAERNDVADKLALYLPE- 216

Query: 158 FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG 198
               +   DV+V+N        +  L  E      +++L G
Sbjct: 217 DQPADLKADVLVANILAGPLRELAPLIAERVKTGGKLALSG 257


>gi|116071311|ref|ZP_01468580.1| hypothetical protein BL107_16735 [Synechococcus sp. BL107]
 gi|116066716|gb|EAU72473.1| hypothetical protein BL107_16735 [Synechococcus sp. BL107]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/146 (26%), Positives = 53/146 (36%), Gaps = 25/146 (17%)

Query: 94  EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153
             ++  RILD G GTG     L   +P    VGVDIS  AL +A+     +G  +   +L
Sbjct: 55  SGQEQPRILDAGCGTGVSTDYLCHLNPGADVVGVDISDGALAVARERLERSGARQEVRSL 114

Query: 154 QSDWFSSV----EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG--GIDGLSHYR 207
           +    S +    E  FD I S       V+      E        +L G    +GL H  
Sbjct: 115 RQQQRSLLDLGDEAPFDYINSV-----GVLHHLREPEAG----LSALAGLLAPEGLLHL- 164

Query: 208 TIADGVSRHLNKDGLCSVEIGYNQKV 233
            +     R          EI   QK 
Sbjct: 165 FLYADAGRW---------EIHRTQKA 181


>gi|283796109|ref|ZP_06345262.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. M62/1]
 gi|291076323|gb|EFE13687.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium sp. M62/1]
          Length = 560

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELL-VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLAL 115
           + +   ++  +S  +F    +T  L  +     +   +   D   + DL +GTG +   L
Sbjct: 286 YEELLGLKFRISPFSFF---QTNSLGAEVLYEKTREYVGGVDGKVVFDLYSGTGTIAQIL 342

Query: 116 LKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSN 171
               P  +  VGV+I  +A+E ++ NA  NG+S   + +  D       +    D+IV +
Sbjct: 343 A---PVAQKVVGVEIVEEAVEASRVNAERNGLS-NCEFIAGDVLKVVGELTDKPDLIVLD 398

Query: 172 PP 173
           PP
Sbjct: 399 PP 400


>gi|154293828|ref|XP_001547359.1| hypothetical protein BC1G_14242 [Botryotinia fuckeliana B05.10]
 gi|150845215|gb|EDN20408.1| hypothetical protein BC1G_14242 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 56/177 (31%), Gaps = 36/177 (20%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSER----FD 151
            +  RILD+GTGTG   +    E    +  G D+S               V        D
Sbjct: 163 PNPQRILDVGTGTGLWAIECADEFASAEVTGTDLSP---------IQPGWVPPNCKFMID 213

Query: 152 TLQSDWFSSVEGLFDVI--------VSN-PPYIESVIVDCLGL---EVRDFDPRISLDGG 199
             +++W  S    FD+I        +S+ P +              E ++ +  I  D G
Sbjct: 214 DAENEWLFSNNRQFDLIHWRVLASSISDWPKFFSQAYTHVRPGGWVEAQEHEVHIESDDG 273

Query: 200 ID---GLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLV--NAFK 251
            D   G    +     +     K+G    E+  NQ     +         V    +K
Sbjct: 274 TDLNAG--DLQRFFGLIDEASVKNGKMMDEVAGNQ----KQWMIDAGFVDVHDQVYK 324


>gi|324999715|ref|ZP_08120827.1| cyclopropane-fatty-acyl-phospholipid synthase [Pseudonocardia sp.
           P1]
          Length = 432

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 19/152 (12%)

Query: 35  RFFLTNAIVRSLKHESIHRILGWRD---------------FYNVRLTLSSDTFEPRPETE 79
           +      +      E ++ + G R+               F +  ++ S+  F    +  
Sbjct: 135 QRLARRYVEARQPREEVNSLEGSRENIHRHYDLSNDLFALFLDETMSYSAGWFADGSDDL 194

Query: 80  LLV-DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAK 138
           +L  +  +   L     RD + +L++GTG G   LA        +   + IS +   +A+
Sbjct: 195 VLAQERKIDGILDMAGVRDGMHVLEIGTGWG--GLATRAAQRGARVTTLTISEEQKTLAE 252

Query: 139 SNAVTNGVSERFDTLQSDWFSSVEGLFDVIVS 170
                +GV++R   L  D+  +  G +D +VS
Sbjct: 253 QRIAEDGVADRVQVLLRDYREA-RGSYDAVVS 283


>gi|313608707|gb|EFR84537.1| O-methyltransferase family protein [Listeria monocytogenes FSL
           F2-208]
          Length = 217

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L   L  ++ +   RIL+LGT  G   L +  + P  + + V+   K  E A  N    G
Sbjct: 40  LYCLLQILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEKRYEQAIHNIQRYG 99

Query: 146 VSERFDTLQSDWFSSVE-----GLFDVI 168
            S+R   L +D     E     G FD I
Sbjct: 100 ASDRVKVLLTDAIEGAEEILAHGPFDAI 127


>gi|312795107|ref|YP_004028029.1| ribosomal protein L11 methyltransferase [Burkholderia rhizoxinica
           HKI 454]
 gi|312166882|emb|CBW73885.1| Ribosomal protein L11 methyltransferase (EC 2.1.1.-) [Burkholderia
           rhizoxinica HKI 454]
          Length = 299

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 76  PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALE 135
           P T L ++            R    +LD G G+G + + L ++      VG+DI  +A++
Sbjct: 150 PTTRLCMEWIEQHV------RAGDSLLDYGCGSGILAI-LARKCGATPVVGIDIDPQAID 202

Query: 136 IAKSNAVTNGVSERFDTLQSDWFSSVEGLFDVIVSNP 172
            A+ N+  N V   +        +  + +   I+SNP
Sbjct: 203 SAQHNSERNRVDVTYGLPHECPANEFDVVIANILSNP 239


>gi|302334849|ref|YP_003800056.1| 23S rRNA m(5)U-1939 methyltransferase [Olsenella uli DSM 7084]
 gi|301318689|gb|ADK67176.1| 23S rRNA m(5)U-1939 methyltransferase [Olsenella uli DSM 7084]
          Length = 416

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL-------A 114
                +   +F      +  V  ALA     +   +  R+LD   GTG + +        
Sbjct: 208 GCTFEIGPTSFYQTNPRQTEVLYALAVEAAGLRGGE--RVLDAYCGTGTIGICAAAATRR 265

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-------EGLFDV 167
              E    + +GV+    A+  A+ NA  NG+      ++ D  + +       EG FDV
Sbjct: 266 RGAEVQDVRVIGVEQVGDAVACARRNATANGLGGSCSFVREDATAFMRKAAGCGEGRFDV 325

Query: 168 IVSNPP 173
           +  +PP
Sbjct: 326 VFMDPP 331


>gi|326318280|ref|YP_004235952.1| cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323375116|gb|ADX47385.1| Cyclopropane-fatty-acyl-phospholipid synthase [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 427

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 52  HRILG---WRDFYNVRLTLSSDTFEPRPETELLVDSA-LAFSLPRIEKRDVVRILDLGTG 107
           H  LG   +  + +  +  SS  +    E+        L      +  +    +L++G G
Sbjct: 161 HYDLGNDFYAQWLDPSMLYSSAIYPTGSESLEAAQVVKLDRIAQHLALQPGDEVLEIGCG 220

Query: 108 TGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGLFDV 167
            GA+   + +     +  G+ +S + L  A+      G+ +  +    D +  V G FD 
Sbjct: 221 WGALAQDMARR--GARVTGITLSSEQLRFAQERMRQAGLQDSVELRLQD-YRDVPGTFDH 277

Query: 168 IVS 170
           IVS
Sbjct: 278 IVS 280


>gi|260913627|ref|ZP_05920103.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
 gi|260632166|gb|EEX50341.1| methyltransferase [Pasteurella dagmatis ATCC 43325]
          Length = 495

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 63/187 (33%), Gaps = 41/187 (21%)

Query: 72  FEPRPETELLVD---SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVD 128
           +  +     L +   + L+    +  +    ++L++G G G   ++    +P  +  G+D
Sbjct: 16  YISKSFVHTLPERQKAILSLLGFQTPEIKGAKVLEIGCGFGGNIISYALANPDTQFTGID 75

Query: 129 ISCKALEIAKSNAVTNGVSERFDTLQSD--WFSSVEGLFDVIVSNPPYIESVIVDCLGLE 186
           +S K +E  +      G++   + L  D   F + +  FD I+ +       +   +   
Sbjct: 76  LSEKQIEGGREVVKQLGLT-NVELLCQDISCFENQDVKFDYIICH------GVFSWVPEF 128

Query: 187 VRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFL 246
           VRD                   I   V  +L ++G     I YN                
Sbjct: 129 VRD------------------KILQVVKNNLAENGSAI--ISYNTYP---------GWKS 159

Query: 247 VNAFKDY 253
           +   +D 
Sbjct: 160 LEVVRDI 166


>gi|188585313|ref|YP_001916858.1| Methyltransferase type 11 [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350000|gb|ACB84270.1| Methyltransferase type 11 [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 233

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 38/149 (25%)

Query: 93  IEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT 152
           +    V  +LD+  GTG   + L K    F     D S   L   K NA    V   F+ 
Sbjct: 26  LHNHGVENVLDIACGTGFHSIHLAKA--GFNVKAADGSEAMLAKTKENAKLYNVD--FEV 81

Query: 153 LQSDWF---SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
            ++DW    +++   +D ++     + + +          ++             +YR  
Sbjct: 82  EKADWLKLTNTISEKYDAVIC----LGNALTH------LFYE------------DYYRRA 119

Query: 210 ADGVSRHLNKDGLC---------SVEIGY 229
            + + + LNK G+           +E GY
Sbjct: 120 LEQIYQVLNKGGILVADQRNYDAILETGY 148


>gi|157964937|ref|YP_001499761.1| putative methyltransferase [Rickettsia massiliae MTU5]
 gi|157844713|gb|ABV85214.1| Putative methyltransferase [Rickettsia massiliae MTU5]
          Length = 554

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 38/164 (23%)

Query: 92  RIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFD 151
              K +  +IL+LG   G   +      P    VGVD+S   ++ A  N    G+    +
Sbjct: 67  NAPKVENAKILELGCAAGGNVIPHAVLYPKAHFVGVDLSKVQIDEANKNVKALGLK-NIE 125

Query: 152 TLQSDW--FSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTI 209
                        G FD I+ +       ++  +   VRD                   I
Sbjct: 126 FHHCSITDIDDSFGKFDYIICH------GVISWVPKTVRD------------------KI 161

Query: 210 ADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNAFKDY 253
            +  +++L+ +G+    I YN               +V   +D 
Sbjct: 162 FEVCNKNLSPNGIAY--ISYNTLP---------GWNMVRTIRDM 194


>gi|295109966|emb|CBL23919.1| RNA methyltransferase, RsmD family [Ruminococcus obeum A2-162]
          Length = 184

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 21/159 (13%)

Query: 63  VRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF 122
           + L       E RP T+ + ++      P + +    R LDL +G+G + +         
Sbjct: 11  LNLKTVPG-METRPTTDRIKETLFNILQPEMPE---CRFLDLFSGSGGIGIE-ALSRGAA 65

Query: 123 KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV-----EGLFDVIVSNPPYIES 177
             V  + + KA    + N     ++E    L  D   ++     E  FD I  +PPY   
Sbjct: 66  YAVFAEKNPKACSCIRDNLSFTKLAEHGKLLNMDVLQALRSLEGEEAFDCIFMDPPY--- 122

Query: 178 VIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRH 216
                L  +V ++    SL         +  I      H
Sbjct: 123 --NHDLERQVLEYLSDSSLA------DDHTLIITEADLH 153


>gi|238505691|ref|XP_002384057.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220690171|gb|EED46521.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 323

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 33/129 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  ++LD+GTGTG   + +    P  +  G D+S               V E    L  
Sbjct: 70  QDPRKMLDIGTGTGIWPIEMAALFPNAEITGTDLSP---------IQPTVVPENVHFLVD 120

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVS 214
           D                             +  D+  R++ L GGI        +     
Sbjct: 121 DAAEEEW-------------------LWHHDYFDY-IRLAHLTGGIPSSE---ELLRKSL 157

Query: 215 RHLNKDGLC 223
           +HL   G  
Sbjct: 158 QHLKPGGWL 166


>gi|190344507|gb|EDK36191.2| hypothetical protein PGUG_00289 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 568

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            + F    +  + +  I+D   G+G   ++L  +    K VG++IS +A++ A  NA  N
Sbjct: 396 VVDFVRYSMSSKGIRNIVDAYCGSGFFGISLANDVKNGKVVGIEISRQAIKYATHNAKLN 455

Query: 145 GVSE--RFDTLQS 155
           G++       ++ 
Sbjct: 456 GLAVPQHVQFIEG 468


>gi|156538715|ref|XP_001607822.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
          Length = 209

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            L  +  + E  +   + DLGTG G + +         +  G DI   AL I   N    
Sbjct: 37  MLYVAQTQFEDIEDCNVADLGTGCGILSIG-AFLLGAAQVTGFDIDLNALSICAENCEEL 95

Query: 145 GVSERFDTLQSDWFSSVEGL----FDVIVSNPPY 174
                 + +  +  + + G     FD ++ NPP+
Sbjct: 96  EAP--IEMICCNVINYLPGKYEKFFDTVIMNPPF 127


>gi|146421938|ref|XP_001486912.1| hypothetical protein PGUG_00289 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 568

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 85  ALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTN 144
            + F    +  + +  I+D   G+G   ++L  +    K VG++IS +A++ A  NA  N
Sbjct: 396 VVDFVRYSMSSKGIRNIVDAYCGSGFFGISLANDVKNGKVVGIEISRQAIKYATHNAKLN 455

Query: 145 GVSE--RFDTLQS 155
           G++       ++ 
Sbjct: 456 GLAVPQHVQFIEG 468


>gi|83773316|dbj|BAE63443.1| unnamed protein product [Aspergillus oryzae]
          Length = 360

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 33/129 (25%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +D  ++LD+GTGTG   + +    P  +  G D+S               V E    L  
Sbjct: 107 QDPRKMLDIGTGTGIWPIEMAALFPNAEITGTDLSP---------IQPTVVPENVHFLVD 157

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS-LDGGIDGLSHYRTIADGVS 214
           D                             +  D+  R++ L GGI        +     
Sbjct: 158 DAAEEEW-------------------LWHHDYFDY-IRLAHLTGGIPSSE---ELLRKSL 194

Query: 215 RHLNKDGLC 223
           +HL   G  
Sbjct: 195 QHLKPGGWL 203


>gi|304314251|ref|YP_003849398.1| methyltransferase [Methanothermobacter marburgensis str. Marburg]
 gi|302587710|gb|ADL58085.1| predicted methyltransferase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 210

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNA 141
           V + + ++   +   +   + DLG GTG + +         +   VD+   ALE+A+  +
Sbjct: 33  VAAEVLWAARTMGDIEGKTVADLGCGTGILGIGAALLGAE-RVYCVDVDAAALEVAEGAS 91

Query: 142 VTNGVSERFDTLQSDWFSS-----VEGLFDVIVSNPPYIESVIVD 181
              G+      +++D         V G  D ++ NPP+      D
Sbjct: 92  EDLGLG-NIQFIKADIRDQGDLVRVTGRVDTVIQNPPFGSQERAD 135


>gi|218679729|ref|ZP_03527626.1| methyltransferase small [Rhizobium etli CIAT 894]
          Length = 338

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 23/146 (15%)

Query: 82  VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSN 140
           +D+       R+ +     + D G G G + + L + S    +    +    ALE AK N
Sbjct: 179 IDAGSELLASRLPQDFTGDVADFGAGWGYLSVELAQRSRGLTRLDLYEADNAALEAAKDN 238

Query: 141 AVTNGVSERFDTLQSDWF-SSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGG 199
              N  +        D     V+  +D+++ NPP+           E    +P +     
Sbjct: 239 LAENCPNAPARFFWHDLAGEPVKDKYDLVIMNPPF----------HEGHAAEPALG---- 284

Query: 200 IDGLSHYRTIADGVSRHLNKDGLCSV 225
                  +T+    +  L   G   +
Sbjct: 285 -------QTLIKTAASALRGGGRLML 303


>gi|189424927|ref|YP_001952104.1| RNA methyltransferase, TrmA family [Geobacter lovleyi SZ]
 gi|189421186|gb|ACD95584.1| RNA methyltransferase, TrmA family [Geobacter lovleyi SZ]
          Length = 485

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 87  AFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNG 145
             +          ++LDL  G G + L L    P   + +GV+++ +A+  AK NA  N 
Sbjct: 323 ETARDWAGLDGSQQVLDLYCGIGGIALTLA---PVARQVLGVELNKEAVADAKRNARLNN 379

Query: 146 VSE-RFDT----LQSDWFSSVEGLFDVIVSNPP 173
               RF+        D     E  F  IV NPP
Sbjct: 380 ARNCRFEAGDVLELLDDLLEDELRFSCIVLNPP 412


>gi|50657093|dbj|BAD32783.1| microcystin synthetase [Microcystis aeruginosa NIES-88]
          Length = 414

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 51/204 (25%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I+GW   Y            P  +    +D  +   L +  K    ++L++G GTG +  
Sbjct: 47  IVGWNSSYTGEP-------IPVAQMREWLDDKVKVILAQQPK----KVLEIGCGTGLILF 95

Query: 114 ALLKESPFFKG-VGVDISCKALE-IAKSNAVTNGVSERFDTLQS--DWFSSVE-GLFDVI 168
            +    P  +   G DIS  AL+ I + N     + E+   L S  D F  +E   FD I
Sbjct: 96  QVA---PHCQCYWGTDISSVALDHIQRINQEGPQL-EQVRLLHSTADNFEGLESEGFDTI 151

Query: 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIG 228
           + N               V  + P I          +   + +G  + L   G   +   
Sbjct: 152 ILN--------------SVVQYFPHI---------DYLLRVLEGAIKVLTPGGCIFL--- 185

Query: 229 YNQKVDVVRI-FESRKLFLVNAFK 251
                DV  +         V  +K
Sbjct: 186 ----GDVRNLQLMEAFHADVELYK 205


>gi|319789313|ref|YP_004150946.1| ribosomal L11 methyltransferase [Thermovibrio ammonificans HB-1]
 gi|317113815|gb|ADU96305.1| ribosomal L11 methyltransferase [Thermovibrio ammonificans HB-1]
          Length = 266

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           LA    +   ++    LD+G G+G + + L  +    + VG DI     E  + N   NG
Sbjct: 124 LAMRFIKKLLKEGDSFLDVGCGSGILSI-LAAKLGASEVVGCDIQPNLQEEIEENQRLNG 182

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVSN 171
           +   F  ++    ++V G FD++V+N
Sbjct: 183 IE--FTFVEGSV-NAVNGKFDLVVAN 205


>gi|224493314|sp|B5XY38|RLMI_KLEP3 RecName: Full=Ribosomal RNA large subunit methyltransferase I;
           AltName: Full=23S rRNA m5C1962 methyltransferase;
           AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
           RlmI
          Length = 400

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 25/132 (18%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+L+  + TG   ++        +   VD S +AL++A+ N   NG+   + + ++ D F
Sbjct: 227 RVLNCFSYTGGFAVS-ALMGGCRQVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVF 285

Query: 159 SSVEG------LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADG 212
             +         FDVIV +PP         +              G   G   Y+ I   
Sbjct: 286 KLLRKYRDQGEKFDVIVMDPPKFVENKSQLM--------------GACRG---YKDINML 328

Query: 213 VSRHLNKDGLCS 224
             + LN  G+  
Sbjct: 329 AIQLLNPGGVLL 340


>gi|239625789|ref|ZP_04668820.1| RNA methyltransferase [Clostridiales bacterium 1_7_47_FAA]
 gi|239520019|gb|EEQ59885.1| RNA methyltransferase [Clostridiales bacterium 1_7_47FAA]
          Length = 462

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 15/130 (11%)

Query: 53  RILGWRDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTG 107
            +L  +DF+      +R  +S  +F       +  +     +   + +     + DL +G
Sbjct: 270 HVLYGQDFFYEELLGLRFRISPFSFF--QTNSMGAEVLYDTARGFVGETKDKVVFDLYSG 327

Query: 108 TGAVCLALLKESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEG 163
           TG +   L    P  K  VGV+I  +A+E AK NA  NG+ +  + +  D       +E 
Sbjct: 328 TGTIAQILA---PVAKKVVGVEIVEEAVEAAKVNAGLNGL-DNCEFVAGDVLKVIDDLED 383

Query: 164 LFDVIVSNPP 173
             D+IV +PP
Sbjct: 384 KPDLIVVDPP 393


>gi|254488675|ref|ZP_05101880.1| ribosomal RNA small subunit methyltransferase [Roseobacter sp.
           GAI101]
 gi|214045544|gb|EEB86182.1| ribosomal RNA small subunit methyltransferase [Roseobacter sp.
           GAI101]
          Length = 330

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 77/238 (32%), Gaps = 41/238 (17%)

Query: 2   QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGW---- 57
           +A  ++   + +   +S   V++D      D     L     R      I +  G     
Sbjct: 79  RAKAEARVLIAKACEVSDGVVVIDGQK--TDGVDSILREMRARVTIQGPISKAHGKMFWI 136

Query: 58  ----RDFY-----NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGT 108
                DF+        LT       P   +   VD A A  +  + ++   ++ DLG G 
Sbjct: 137 SDPAADFFVDWAQGPSLTEGGFWTAPGVFSADGVDLASALLVDALPEKLGAQVADLGAGW 196

Query: 109 GAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS-SVEGLFDV 167
           G +   +L      K   V+    ALE A+ N       +R + L  D  +       D 
Sbjct: 197 GFLSAHVLTRPAVEKLYLVEAGHLALECARRNVA----DDRAEFLWEDATTWQAPHRLDA 252

Query: 168 IVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225
           +V NPP+             R  +P+I            +      +R L+  G   +
Sbjct: 253 VVMNPPFHTG----------RAAEPQIG-----------QAFVTAAARMLSAQGKLWM 289


>gi|89053452|ref|YP_508903.1| 50S ribosomal protein L11P methyltransferase [Jannaschia sp. CCS1]
 gi|88863001|gb|ABD53878.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Jannaschia
           sp. CCS1]
          Length = 290

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 23/137 (16%)

Query: 73  EPRPETELLVDSALAFSLPR---------------IEKRDVVRILDLGTGTGAVCLALLK 117
            P     LL+++A+AF                    +      + D+G GT  + +A  K
Sbjct: 109 VPEGSVPLLIEAAMAFGTGHHGTTKGCLEAVDKLFTDGFSPQSVADIGCGTAVLAIAAAK 168

Query: 118 ESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS----SVEGLFDVIVSNPP 173
                  +  DI  +A+++A +NA  N V+E    +++  F     +  G +D++ +N  
Sbjct: 169 VLRLP-VIASDIDPQAVDVALANASANDVAEFVSCVEAAGFDHAALAEAGPYDLVFAN-- 225

Query: 174 YIESVIVDCLGLEVRDF 190
            I    +  L  +V   
Sbjct: 226 -ILKGPLIELAPDVATH 241


>gi|78212808|ref|YP_381587.1| hypothetical protein Syncc9605_1278 [Synechococcus sp. CC9605]
 gi|78197267|gb|ABB35032.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 226

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           ++                ++DLG G G + L L +  P  + VG+D +   L +A+  A 
Sbjct: 34  EAIQQLLFTTSPLPADPLVVDLGCGPGNITLQLAELLPNARIVGIDGAESMLALARERAQ 93

Query: 143 TNGVSERF--DTLQSDWFSSVEGLFDVIVSN 171
              +   F   TLQ      + G  D+IVSN
Sbjct: 94  QQQLEISFLCQTLQEVLQGPLLGQADLIVSN 124


>gi|75910222|ref|YP_324518.1| hypothetical protein Ava_4018 [Anabaena variabilis ATCC 29413]
 gi|75703947|gb|ABA23623.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
          Length = 184

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 35/176 (19%)

Query: 60  FYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKES 119
           + N ++       E RP T  + ++        IE     R LDL  G G++  A     
Sbjct: 6   YGNRQIKTLPG-QETRPTTGRVREAVFNIWQGEIE---GCRWLDLCAGNGSMG-AEALCR 60

Query: 120 PFFKGVGVDISCKALEIAKSNAVT-NGVSERFDTLQSDWFSSVE----GLFDVIVSNPPY 174
                VG++ S +A  I + N        +++  L+ D    ++      FD I  +PPY
Sbjct: 61  GASLVVGIEKSSRACAIIQENWQRIANNEQKWRVLRGDVLQQLKNLSGQQFDRIYFDPPY 120

Query: 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230
              +    L          I+L                  + L+  G  ++E    
Sbjct: 121 ASGLYQPVLEA--------IALY-----------------QLLDPSGEIAIEHNPQ 151


>gi|325117932|emb|CBZ53483.1| hypothetical protein NCLIV_032700 [Neospora caninum Liverpool]
          Length = 560

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 70/201 (34%), Gaps = 47/201 (23%)

Query: 59  DFYNVRLTL---SSDTFEPRPETE---------LLVDS----ALAFSLPRIEKRDVV--- 99
           +FY ++  L         P   +          LLVD     AL  +L   +        
Sbjct: 233 EFYGLKFELPLSHEHFLVPCIPSRANYIHHMADLLVDVEQEGALHLALHGRDGDSPAVRR 292

Query: 100 -------------RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGV 146
                        ++LD+G G   V   L      +  VG DIS ++LE+A+ N   NG+
Sbjct: 293 AAQEAQPLRGKHIKVLDIGVGANCVYPLLGCAEYGWTFVGSDISKRSLELARENVNLNGL 352

Query: 147 SERFDTLQSD----WFSSV---EGLFDVIVSNPPYIESVIVDCLGL----EVRDFDPRIS 195
                         +FS V     +F + + NPP+ ES     +      E ++ +  I 
Sbjct: 353 GSCVHLRHQQDPVKFFSGVVENGEMFALSMCNPPFHESTDQVNVCPFRVLEAQNHE--IV 410

Query: 196 LDGGIDGLSHYRTIADGVSRH 216
            +GG   L+   ++       
Sbjct: 411 CEGGE--LNFIMSMIRESREF 429


>gi|15612033|ref|NP_223685.1| cyclopocyclopropane fatty acid synthase [Helicobacter pylori J99]
 gi|4155557|gb|AAD06552.1| CYCLOPOCYCLOPROPANE FATTY ACID SYNTHASE [Helicobacter pylori J99]
          Length = 389

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 33/181 (18%)

Query: 52  HRILGWRDFYNV----RLTLSSDTFEPRPETELLVD-SALAFSLPRIEKRDVVRILDLGT 106
           H  LG  DFY++     L+ S   F+   +T        L  +L ++  +   ++LD+G 
Sbjct: 112 HYDLGN-DFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKQGEKLLDIGC 170

Query: 107 GTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDT--LQSDWFSSVEGL 164
           G G + +   +E    + +G+ IS +  + A       G+ ++     L           
Sbjct: 171 GWGYLSIKAAQEY-GAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYR 229

Query: 165 FDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS 224
           FD +VS                V  F+  +    G D L  Y      V   L + G+  
Sbjct: 230 FDKVVS----------------VGMFE-HV----GKDNLPFY---FKKVKEVLKRGGMFL 265

Query: 225 V 225
           +
Sbjct: 266 L 266


>gi|38233728|ref|NP_939495.1| putative DNA methylase [Corynebacterium diphtheriae NCTC 13129]
 gi|38199989|emb|CAE49658.1| Putative DNA methylase [Corynebacterium diphtheriae]
          Length = 192

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 11/125 (8%)

Query: 54  ILGWRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCL 113
           I G        + +      P  +        L  SL         R+LDL  G+GA+ L
Sbjct: 5   ISGEA--RGRTIKVPEHGTRPTSDRA---REGLFSSLQVRFGFAGARVLDLFAGSGALGL 59

Query: 114 ALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS----DWFSSVEGLFDVIV 169
                      V V+ + KA+ + + N    G     D ++        S+ +  FD+++
Sbjct: 60  EAASRGAES-VVLVENNPKAVAVIRHNIAVVGHPH-VDVVEMKASTYVASAPKNHFDMVL 117

Query: 170 SNPPY 174
           ++PPY
Sbjct: 118 ADPPY 122


>gi|254387381|ref|ZP_05002629.1| cyclopropane-fatty-acyl-phospholipid synthase UfaA1 [Streptomyces
           sp. Mg1]
 gi|194346174|gb|EDX27140.1| cyclopropane-fatty-acyl-phospholipid synthase UfaA1 [Streptomyces
           sp. Mg1]
          Length = 466

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 30/158 (18%)

Query: 83  DSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAV 142
           +  +   L   +  +  R+L++GTG G   LAL       +   V +S +  ++A+    
Sbjct: 223 ERKIDRLLDLADVGEGTRLLEIGTGWGE--LALRAARRGAQVTTVTLSAEQRDLARRRVA 280

Query: 143 TNGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDG 202
             G+S R D    D +  V G +D +VS         V+ +     +  P          
Sbjct: 281 EAGLSHRVDVDLRD-YRDVFGRYDAVVS---------VEMIEAVGAEHWP---------- 320

Query: 203 LSHYRTIADGVSRHLNKDGLCSVE---IGYNQKVDVVR 237
              Y      + R L   G  +++   +G+ Q +D   
Sbjct: 321 --VY---FGALRRALLPGGRIALQAITMGHRQMLDTAA 353


>gi|187932429|ref|YP_001884796.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           B str. Eklund 17B]
 gi|187720582|gb|ACD21803.1| 23S rRNA (uracil-5-)-methyltransferase RumA [Clostridium botulinum
           B str. Eklund 17B]
          Length = 450

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 10/116 (8%)

Query: 62  NVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPF 121
            +   +S  +F  +  T+   +S  +     +   +   + DL  GTG +   +    P 
Sbjct: 274 GLDFKISPFSF-FQTNTK-GAESLYSLVRDFMGSSENKVVFDLYCGTGTIGQIVA---PN 328

Query: 122 FK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---SVEGLFDVIVSNPP 173
            K  VG+++  +A+E AK NA  NG+    + L  D      +V+   D+I+ +PP
Sbjct: 329 AKKVVGIELIEEAVEAAKENAKLNGL-NNCEFLAGDVAEIIKTVKDKPDIIILDPP 383


>gi|162447040|ref|YP_001620172.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma
           laidlawii PG-8A]
 gi|161985147|gb|ABX80796.1| ribosomal RNA small subunit methyltransferase C [Acholeplasma
           laidlawii PG-8A]
          Length = 197

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 41/150 (27%)

Query: 115 LLKESPFFKGVGVDISCKALEIAKSNAVTNGV-SERFDTLQSDWFSSVEGLFDVIVSNPP 173
           L K  P      +DI+ +ALE+   N   N +        +S+ FS V+  FD IVSNPP
Sbjct: 75  LKKVHPNLDVTQIDINTRALEL---NIKNNKLNQVETTVYESNLFSHVDKTFDCIVSNPP 131

Query: 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKV 233
                                       G +    +     +HLN  G   + +  +Q  
Sbjct: 132 I-------------------------RTGKATIYNLYKDAYKHLNTYGQLWIVVRKDQGA 166

Query: 234 D-----VVRIFES-------RKLFLVNAFK 251
                 +  I+E        +  +++ A K
Sbjct: 167 KSTIDYLSTIYEEVELVKRHKGFYVIRAQK 196


>gi|160933690|ref|ZP_02081078.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753]
 gi|156867567|gb|EDO60939.1| hypothetical protein CLOLEP_02551 [Clostridium leptum DSM 753]
          Length = 460

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 15/121 (12%)

Query: 61  YNVRLTLSSDTF--EPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKE 118
             +   LS  +F    R + E+L   A  ++  + E      +LDL  GTG + + +  +
Sbjct: 273 CGLSFFLSPLSFYQVNRDQAEILYRLAGEYASLQKED----TVLDLYCGTGTIGMTMASK 328

Query: 119 SPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE------GLFDVIVSNP 172
           +   K +GV++  +A+E AK+NAV NGV    + +  D   +V+          V+V +P
Sbjct: 329 AG--KVIGVEVVPEAIEDAKANAVRNGVK-NIEFICGDSAQAVQMLRKRGERPTVVVVDP 385

Query: 173 P 173
           P
Sbjct: 386 P 386


>gi|149918556|ref|ZP_01907045.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
           SIR-1]
 gi|149820632|gb|EDM80044.1| ribosomal protein L11 methyltransferase [Plesiocystis pacifica
           SIR-1]
          Length = 342

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGV-GVDISCKALEIAKSNAVTN 144
           L  +L  +      R+LDLG G+G + L+ L+  P   G+   D   +A++ ++ NA  N
Sbjct: 179 LLVNLAAVPSWQPRRVLDLGCGSGILGLSALRLRPDLGGLQLTDHDPEAVDTSRENAALN 238

Query: 145 GVSERFDTL---------QSDWFSSVEGLFDVIVSN 171
           G+ E    +          +D     +   D + +N
Sbjct: 239 GLGEDARVVAQVLDLLTEDADDAPGSDPRADFVFAN 274


>gi|154483239|ref|ZP_02025687.1| hypothetical protein EUBVEN_00940 [Eubacterium ventriosum ATCC
           27560]
 gi|149736047|gb|EDM51933.1| hypothetical protein EUBVEN_00940 [Eubacterium ventriosum ATCC
           27560]
          Length = 317

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 57  WRDFYNVRLTLSSDTFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALL 116
           + +   ++  +S   F       L  +   + +   I +     I DL +GTG +   L 
Sbjct: 53  YEELLGLKFKIS--VFSFFQTNSLGAEVLYSKAREYIGETKDKLIFDLYSGTGTIAQILA 110

Query: 117 KESPFFK-GVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWF---SSVEGLFDVIVSNP 172
              P  K  VGV+I  +A+E AK NA  N + E  + +  D       ++   D+IV +P
Sbjct: 111 ---PVAKKVVGVEIIEEAVEAAKVNASLNNL-ENCEFIAGDVLKVIDDLQDKPDLIVLDP 166

Query: 173 P 173
           P
Sbjct: 167 P 167


>gi|159900745|ref|YP_001546992.1| type 11 methyltransferase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893784|gb|ABX06864.1| Methyltransferase type 11 [Herpetosiphon aurantiacus ATCC 23779]
          Length = 234

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 88  FSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS 147
             L         RI D+G G G V +A+ +  P  + + +D+S + +  A+  A   G++
Sbjct: 27  HLLQNQPIAAKPRIFDVGCGQGQVAIAMAQAWPDAEIIAIDLSPEQIVKARQAAAQAGIN 86

Query: 148 -ERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLE---VRDFDPRISLDG 198
             +F       F       D+IV+      + ++  +  E   V      ++LDG
Sbjct: 87  TIQFGAADWREFELPRSGVDIIVA------TQVIQFMPDEHAFVEYLADALALDG 135


>gi|326491707|dbj|BAJ94331.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 370

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 8/81 (9%)

Query: 100 RILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVS-ERFDTLQSDWF 158
           R+LDL   +G   L+  K        G+D S  AL++A  N + N +  ER   L+ D  
Sbjct: 280 RVLDLCCYSGGFALSAAK-GGATNVTGIDSSGSALDLANENILLNKLDAERISFLKEDAT 338

Query: 159 SSVEG------LFDVIVSNPP 173
           + ++G      L+D+++ +PP
Sbjct: 339 AFMKGAISRNELWDLVILDPP 359


>gi|324509807|gb|ADY44112.1| Methyltransferase-like protein 5 [Ascaris suum]
          Length = 217

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 101 ILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160
           + DLG G G + L           +GVD+    L + + N     +S+  + +Q D    
Sbjct: 56  VADLGCGCGILALG-AAHLGASYCLGVDVDEDVLAVCQRNVDHCELSDVVELVQMDVTHR 114

Query: 161 ---VEGLFDVIVSNPPY 174
              +  LFD ++ NPP+
Sbjct: 115 TAVLRPLFDTVLMNPPF 131


>gi|315926537|gb|EFV05918.1| Ribosomal protein L11 methyltransferase [Campylobacter jejuni
           subsp. jejuni DFVF1099]
          Length = 274

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 96  RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155
           +  +R LDLG G+G + + + K     +    D    A++ +  NA  NGV   F     
Sbjct: 138 KSKLRALDLGCGSGILGIIMAKFGCNVEICDTD--ELAIDSSLENARLNGVD--FHKAWC 193

Query: 156 DWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDF 190
                  GL+++IV+N   I + ++  L  ++++ 
Sbjct: 194 GSIDKANGLYNLIVAN---IIADVILILEKDIKNH 225


>gi|282865460|ref|ZP_06274511.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE]
 gi|282559504|gb|EFB65055.1| Trans-aconitate 2-methyltransferase [Streptomyces sp. ACTE]
          Length = 264

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 95  KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQ 154
            R   RI DLG G G V   L  + P  +  G D S + LE A+          R D  +
Sbjct: 33  PRPTPRIADLGCGAGNVTALLAADRPEARVTGYDNSTRMLEQAR-----THAGPRLDFAE 87

Query: 155 SDWFS-SVEGLFDVIVSN 171
           +D  +   E  +D+IVSN
Sbjct: 88  ADVATWEPEETYDLIVSN 105


>gi|163759177|ref|ZP_02166263.1| fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase
           [Hoeflea phototrophica DFL-43]
 gi|162283581|gb|EDQ33866.1| fatty acid synthase, cyclopropane-fatty-acyl-phospholipid synthase
           [Hoeflea phototrophica DFL-43]
          Length = 431

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 86  LAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG 145
           L     ++  +    +LD+G G G++ L   +        GV +S + L+ A++ A   G
Sbjct: 185 LEMICRKLRLKPGDTMLDIGFGWGSLALYAARNY-GAHVTGVTLSKEQLDHARARAEEMG 243

Query: 146 VSERFDTLQSDWFSSVEGLFDVIVS 170
           +++R      D ++ +EG FD I S
Sbjct: 244 LADRVRFELLD-YAEIEGQFDKITS 267


>gi|160943386|ref|ZP_02090621.1| hypothetical protein FAEPRAM212_00872 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445412|gb|EDP22415.1| hypothetical protein FAEPRAM212_00872 [Faecalibacterium prausnitzii
           M21/2]
          Length = 202

 Score = 54.7 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 54/187 (28%), Gaps = 43/187 (22%)

Query: 84  SALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVT 143
           +   + L  ++      +LD G G GA    LLK  P  K  G+D S  ++E A+     
Sbjct: 28  AMAEWGLSFLQPAPDAMVLDCGCGGGANIKTLLKLCPNGKVQGIDYSAVSVEKAQKVNAR 87

Query: 144 NGVSERFDTLQSDWFSSVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGL 203
              + R    Q+             V+  P+           E   F P ++ +      
Sbjct: 88  AIAAGRCTVQQAS------------VAELPFEAEQFDVVTAFETVYFWPELAQN------ 129

Query: 204 SHYRTIADGVSRHLNKDGLCSV--EIG--------YNQ---------KVDVVRIFESRKL 244
                    V R L   G+  +  E          + Q            +    E    
Sbjct: 130 ------FREVYRVLKPGGVFFICNEANGETTKDDKWTQIIDGMTIYTDTALKEYLEQAGF 183

Query: 245 FLVNAFK 251
             + + K
Sbjct: 184 CQIQSHK 190


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.312    0.171    0.519 

Lambda     K      H
   0.267   0.0525    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,136,827,831
Number of Sequences: 14124377
Number of extensions: 304573833
Number of successful extensions: 1131119
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 17276
Number of HSP's successfully gapped in prelim test: 34099
Number of HSP's that attempted gapping in prelim test: 1055834
Number of HSP's gapped (non-prelim): 59118
length of query: 264
length of database: 4,842,793,630
effective HSP length: 136
effective length of query: 128
effective length of database: 2,921,878,358
effective search space: 374000429824
effective search space used: 374000429824
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 81 (35.5 bits)